Query lcl|NC_019407.1_cdsid_YP_006988768.1 [gene=D868_gp262] [protein=hypothetical protein] [protein_id=YP_006988768.1] [location=54474..54947] Match_columns 157 No_of_seqs 2 out of 5 Neff 1.3 Searched_HMMs 1612 Date Thu Nov 7 18:12:59 2013 Command /home/guerois/workspace/virfam/python/lib/hhsearch//hhsearch2 -i .//seq/seq_86 -d /home/guerois/workspace/virfam/python/profile_database/capsid_neck_tail.hhm -glob -cpu 7 -o .//seq/HHR/seq_86_vs_rec_db.hhr No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM 1 protein:vir:96774 Length: 152 98.1 1.1E-08 6.7E-12 64.3 5.6 125 1-157 1-143 (152) 2 protein:vir:79638 Length: 146 98.0 4.6E-08 2.9E-11 60.8 6.7 127 11-157 1-131 (146) 3 protein:vir:94944 Length: 121 98.0 2.4E-08 1.5E-11 62.3 5.0 121 5-156 1-121 (121) 4 protein:vir:94994 Length: 131 97.9 4.7E-08 2.9E-11 60.8 4.9 120 14-157 1-121 (131) 5 protein:vir:80425 Length: 134 97.8 9.2E-08 5.7E-11 59.1 6.2 123 14-157 1-124 (134) 6 protein:vir:104347 Length: 145 97.7 1.9E-07 1.2E-10 57.4 6.4 131 1-157 1-132 (145) 7 protein:vir:107703 Length: 147 97.6 3.6E-07 2.3E-10 55.9 6.1 130 1-157 1-131 (147) 8 protein:vir:95157 Length: 144 97.4 9.4E-07 5.8E-10 53.6 6.6 134 1-157 1-135 (144) 9 protein:vir:97190 Length: 148 97.3 1E-06 6.4E-10 53.4 5.8 133 1-157 1-134 (148) 10 protein:vir:78380 Length: 131 97.3 1E-06 6.4E-10 53.4 5.5 121 14-157 1-121 (131) 11 protein:vir:103280 Length: 142 97.2 2.2E-06 1.3E-09 51.6 6.3 128 1-157 1-129 (142) 12 protein:vir:94654 Length: 142 63.0 0.29 0.00018 23.5 7.0 109 3-157 1-109 (142) 13 protein:vir:94538 Length: 125 32.5 1.4 0.00085 19.8 5.5 109 1-157 1-119 (125) 14 protein:vir:3617 Length: 112 # 29.4 1.7 0.001 19.4 5.9 105 1-157 1-112 (112) 15 protein:vir:79034 Length: 141 25.8 1.4 0.00089 19.7 4.4 115 1-157 1-121 (141) 16 protein:vir:102338 Length: 116 20.2 1.2 0.00076 20.1 2.9 84 20-157 1-101 (116) No 1 >protein:vir:96774 Length: 152 # NCBI annotation: hypothetical phage protein # Family: family:all:448 # MgeID: mge:1629 # MgeName: phiHSIC # Cross-refs: genbank:acc:YP_224253;genbank:gi:62362388;genbank:GeneID:3345713 Probab=98.10 E-value=1.1e-08 Score=64.26 Aligned_cols=125 Identities=21% Similarity=0.307 Sum_probs=90.5 Q ss_pred CC---CCCceeEEEecCchHHHHHHHHHHHHHhHhhhhhhhHHHhhhHHhhcCCc--------------ccCcceecccc Q lcl|NC_019407. 1 MK---SGGAKLSFYTDGNLEAAFKRFFATAEKRYDERADRLLIKLNELILARTPV--------------WEGDTIHNWRW 63 (157) Q Consensus 1 mk---~~g~kl~~~~d~~~~~af~rff~~a~~~~~~r~~~lliklne~il~~tpv--------------wegdti~nwrw 63 (157) |- -||.-++| .+-...|-+++|...|.......+|+=.-+...||| =.|.-=.||.. T Consensus 1 ~~~~~~~~~~msF------aa~i~~~~~~~e~~~~~~~R~~~~~i~~~vv~~sPVg~~~~~~~~a~~~ydtGrfRanw~v 74 (152) T protein:vir:96 1 MLSCICGGNPMSW------SKSLKNIIVKNENLTEKQLRAGLFDAANTVILGSPVGAPELWQQPAPNYYRAGSYRSNHRV 74 (152) T ss_pred CcceeeCCCcccc------cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccccccchhhhhhhhee Confidence 32 24444444 455678999999999999999999999999999999 55666789999 Q ss_pred cccCCCccccccccCCCCCCcccCCCCccchhhhhhcchhhhhhhhhccCCcee-EEEeccccchhhhhhcccCCchhhh Q lcl|NC_019407. 64 STRAPDMRHEAPLDNGDPGRTSEMDLGQEPRRRVNETRPRQSLAGALRAKEPID-IYLTNTAESAVDLEYGLLPTRAQSR 142 (157) Q Consensus 64 strapdm~he~p~~~gdpg~t~~m~~g~eprr~~ne~rpr~slagalrak~pid-iyltnt~~sav~leygllpt~~~sr 142 (157) |.-.|... ..++|.++..+. .+.+.+...++-| ||++|+.-=|..||||- -.. T Consensus 75 S~~~p~~~-----~~~~~~~~~t~~----------------~~~~~i~~~~~g~~iyi~NnlPYA~~LEyG~-----S~Q 128 (152) T protein:vir:96 75 SISKITSF-----EKGISSQSSIMM----------------DLQSDIAKFKIGETLFMTNPLPYATSIEYGH-----SSQ 128 (152) T ss_pred eecCCCcc-----cccCCCCCchHH----------------HHHHHHhhccccceEEEeeCchhhhHhhccc-----cCC Confidence 99888632 234555544432 2344455445544 89999999999999993 223 Q ss_pred cccceeeehhhhhcC Q lcl|NC_019407. 143 NKMGMVRISIKEVFG 157 (157) Q Consensus 143 ~~~g~vr~~i~e~~~ 157 (157) -..||||+++.+.-. T Consensus 129 AP~G~vr~t~~~~~~ 143 (152) T protein:vir:96 129 APNGVYRPAVRRLVK 143 (152) T ss_pred CCchHHHHHHHHHHH Confidence 578999999987655 No 2 >protein:vir:79638 Length: 146 # NCBI annotation: gp40 # Family: family:all:448 # MgeID: mge:1872 # MgeName: TLS # Cross-refs: genbank:acc:YP_001285529;genbank:gi:148734512;genbank:GeneID:5219996 Probab=97.97 E-value=4.6e-08 Score=60.81 Aligned_cols=127 Identities=20% Similarity=0.308 Sum_probs=92.5 Q ss_pred EecC---chHHHHHHHHHHHHHhHhhhhhhhHHHhhhHHhhcCCcccCcceecccccccCCCccccccccCCCCCCcccC Q lcl|NC_019407. 11 YTDG---NLEAAFKRFFATAEKRYDERADRLLIKLNELILARTPVWEGDTIHNWRWSTRAPDMRHEAPLDNGDPGRTSEM 87 (157) Q Consensus 11 ~~d~---~~~~af~rff~~a~~~~~~r~~~lliklne~il~~tpvwegdti~nwrwstrapdm~he~p~~~gdpg~t~~m 87 (157) --|+ .|++-...|-++.+..-+.-.....+++=..+..+|||=.|.-=-||..|+-.|+..- .+.-||. T Consensus 1 ma~~~~~sFa~~i~~~~~~ve~~~~~~~r~~a~~i~~~vv~~sPVDTGr~Ranw~vs~~~~~~~~---~~~~dp~----- 72 (146) T protein:vir:79 1 MADYSIREFHGNVDKWIEQVESGLNDVIQIFGEKVHGALVDIAPVDTGRFKANMQITANKPPLYA---LNQYDPD----- 72 (146) T ss_pred CCcchhHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcchhhccccceeecCccccc---ccCCCCC----- Confidence 3454 6788899999999999998888888888778888999999999999999999988443 2333442 Q ss_pred CCCccchhhhhhcchhhhhhhhhccCCce-eEEEeccccchhhhhhcccCCchhhhcccceeeehhhhhcC Q lcl|NC_019407. 88 DLGQEPRRRVNETRPRQSLAGALRAKEPI-DIYLTNTAESAVDLEYGLLPTRAQSRNKMGMVRISIKEVFG 157 (157) Q Consensus 88 ~~g~eprr~~ne~rpr~slagalrak~pi-diyltnt~~sav~leygllpt~~~sr~~~g~vr~~i~e~~~ 157 (157) |++.. +.-..-+.+.++..+|. -||++|+..=|..||||- ......||||+++.+.-. T Consensus 73 --G~~t~-----~~~~~~i~~~~~g~~~~~~iyi~NnlpYA~~LEyG~-----S~QAP~G~v~~~~~~~~~ 131 (146) T protein:vir:79 73 --GEKIK-----AEGRRTLYALLHGGGAIKSIYFSNMLIYANALEYGH-----SKQAPAGVFGIVAIRLRS 131 (146) T ss_pred --CcccH-----HHHHHHHHHHHhcccccceeEEeeCchhhhhhhccc-----cCCCcchHHHHHHHHHHH Confidence 22221 11222344555555664 499999999999999994 233678999999885433 No 3 >protein:vir:94944 Length: 121 # NCBI annotation: hypothetical protein phage protein # Family: family:all:448 # MgeID: mge:1538 # MgeName: Xp15 # Cross-refs: genbank:acc:YP_239282;genbank:gi:66392064;genbank:GeneID:5076589 Probab=97.96 E-value=2.4e-08 Score=62.33 Aligned_cols=121 Identities=21% Similarity=0.341 Sum_probs=87.5 Q ss_pred CceeEEEecCchHHHHHHHHHHHHHhHhhhhhhhHHHhhhHHhhcCCcccCcceecccccccCCCccccccccCCCCCCc Q lcl|NC_019407. 5 GAKLSFYTDGNLEAAFKRFFATAEKRYDERADRLLIKLNELILARTPVWEGDTIHNWRWSTRAPDMRHEAPLDNGDPGRT 84 (157) Q Consensus 5 g~kl~~~~d~~~~~af~rff~~a~~~~~~r~~~lliklne~il~~tpvwegdti~nwrwstrapdm~he~p~~~gdpg~t 84 (157) =.+ -.|+.....|-+..++..+.-.....+++-.-|..++||=.|.-=-||.+|...|+.. ..++.||.-+ T Consensus 1 ~~~------~sf~~~i~~~~~~ve~~~~~~~r~~~~~~~~~vv~~sPVdtGrfRanw~vs~~~p~~~---~~~~~dp~g~ 71 (121) T protein:vir:94 1 MIS------MKFNVNLSRLRSNLREEAKKKAIRIAQEIVNGVIARSPVLAGDYRSSWNVSEGSMEFK---FNNGGNPANP 71 (121) T ss_pred Ccc------chhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchhhhhccccccccCcccc---cCCCCCCCcc Confidence 111 2355667788888888888887888888888888999999999999999999999843 3444565444 Q ss_pred ccCCCCccchhhhhhcchhhhhhhhhccCCceeEEEeccccchhhhhhcccCCchhhhcccceeeehhhhhc Q lcl|NC_019407. 85 SEMDLGQEPRRRVNETRPRQSLAGALRAKEPIDIYLTNTAESAVDLEYGLLPTRAQSRNKMGMVRISIKEVF 156 (157) Q Consensus 85 ~~m~~g~eprr~~ne~rpr~slagalrak~pidiyltnt~~sav~leygllpt~~~sr~~~g~vr~~i~e~~ 156 (157) ...+.| ....+ .+.+ -||++|+..=|..||||- -.....||||+++.|.= T Consensus 72 ~t~~~~------------~~~~~----~~~~-~iyi~NnlpYA~~LE~G~-----S~QAP~G~v~~t~~~~q 121 (121) T protein:vir:94 72 TPAPAI------------VVSSN----VALP-HFYITNGAPYAQQLEKGS-----STQAPLGIVRVTLASLR 121 (121) T ss_pred hhHHHH------------HHHHh----hccc-eEEEeeCcchhhhhhccc-----CCCCcchHHHHHHHhhC Confidence 332221 11122 2345 499999999999999993 22356799999999987 No 4 >protein:vir:94994 Length: 131 # NCBI annotation: hypothetical protein # Family: family:all:448 # MgeID: mge:1547 # MgeName: KS7 # Cross-refs: genbank:acc:YP_224022;genbank:gi:62327309;genbank:GeneID:5176822 Probab=97.85 E-value=4.7e-08 Score=60.76 Aligned_cols=120 Identities=23% Similarity=0.294 Sum_probs=86.0 Q ss_pred CchHHHHHHHHHHHHHhHhhhhhhhHHHhhhHHhhcCCcccCcceecccccccCCCccccccccCCCCCCcccCCCCccc Q lcl|NC_019407. 14 GNLEAAFKRFFATAEKRYDERADRLLIKLNELILARTPVWEGDTIHNWRWSTRAPDMRHEAPLDNGDPGRTSEMDLGQEP 93 (157) Q Consensus 14 ~~~~~af~rff~~a~~~~~~r~~~lliklne~il~~tpvwegdti~nwrwstrapdm~he~p~~~gdpg~t~~m~~g~ep 93 (157) =.|+.-+..|-+++++.-+.-.....+++=..|..++||=.|.-=-||.+|+..|+..-..+ =||+ ....++ T Consensus 1 msF~~~i~~~~~~ve~~~~~~~r~~a~~~~~~iv~~sPVdTGr~Ranw~vs~~~~~~~~~~~---~d~~--g~~t~~--- 72 (131) T protein:vir:94 1 MSFALDVTRFVEKAKKNPEKVIRQVSIKLFSAIIKASPVDTGRFRMNWMASGSTPADGTTDA---TDKS--GNTATG--- 72 (131) T ss_pred CCcccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhhccchhccccccccccCC---CCCC--chhhHH--- Confidence 45566678899999999998888888998888888999999999999999999998433222 2332 111121 Q ss_pred hhhhhhcchhhhhhhhhccCCc-eeEEEeccccchhhhhhcccCCchhhhcccceeeehhhhhcC Q lcl|NC_019407. 94 RRRVNETRPRQSLAGALRAKEP-IDIYLTNTAESAVDLEYGLLPTRAQSRNKMGMVRISIKEVFG 157 (157) Q Consensus 94 rr~~ne~rpr~slagalrak~p-idiyltnt~~sav~leygllpt~~~sr~~~g~vr~~i~e~~~ 157 (157) . +...+...++ --||++|+..=|..||||- ......||||+++.+.-. T Consensus 73 -------~----~~~~i~~~~~g~~iyi~Nn~pYA~~LEyG~-----S~QAP~g~v~~~~~~~~~ 121 (131) T protein:vir:94 73 -------N----ATSFVLNAADWHTFTLTNNLPYAQRLEYGW-----SQQAPQGFVRVNVSRFQQ 121 (131) T ss_pred -------H----HHHHHhhccccceEEEeeCchhhhhhhccc-----cCCCcchHHHHHHHHHHH Confidence 1 2222222233 2399999999999999994 233678999999877544 No 5 >protein:vir:80425 Length: 134 # NCBI annotation: BcepGomrgp15 # Family: family:all:448 # MgeID: mge:1882 # MgeName: BcepGomr # Cross-refs: genbank:acc:YP_001210235;genbank:gi:146329927;genbank:GeneID:5123534 Probab=97.83 E-value=9.2e-08 Score=59.15 Aligned_cols=123 Identities=17% Similarity=0.191 Sum_probs=90.4 Q ss_pred CchHHHHHHHHHHHHHhHhhhhhhhHHHhhhHHhhcCCcccCcceecccccccCCCccccccccCCCCCCcccCCCCccc Q lcl|NC_019407. 14 GNLEAAFKRFFATAEKRYDERADRLLIKLNELILARTPVWEGDTIHNWRWSTRAPDMRHEAPLDNGDPGRTSEMDLGQEP 93 (157) Q Consensus 14 ~~~~~af~rff~~a~~~~~~r~~~lliklne~il~~tpvwegdti~nwrwstrapdm~he~p~~~gdpg~t~~m~~g~ep 93 (157) =.|+.-...|-.+.++.-+.-.....+++=..+..++||=.|.-=-||..|+.+|+..-...-+..+++.+. T Consensus 1 msF~~~i~~~~~~ve~~~~~~~r~~a~~~~~~vv~~sPVdTGr~Ranw~vs~~~~~~~~~~~~d~~g~~~~~-------- 72 (134) T protein:vir:80 1 MSYTDRFNVIAKGIEDNVDNLVKNVALAIGSNVIADTPILTGQARRNWQTELNQMPESVLDIPESPSEGMDE-------- 72 (134) T ss_pred CCcccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcchhhhcccceeecCcccccccCcCCCCccchh-------- Confidence 345566777888888888888888888877777789999999999999999999886654433332232221 Q ss_pred hhhhhhcchhhhhhhhhccCCcee-EEEeccccchhhhhhcccCCchhhhcccceeeehhhhhcC Q lcl|NC_019407. 94 RRRVNETRPRQSLAGALRAKEPID-IYLTNTAESAVDLEYGLLPTRAQSRNKMGMVRISIKEVFG 157 (157) Q Consensus 94 rr~~ne~rpr~slagalrak~pid-iyltnt~~sav~leygllpt~~~sr~~~g~vr~~i~e~~~ 157 (157) --+.+...+..-++-| ||++|+..=|..||||.-= ....||||+++.|.-. T Consensus 73 --------~~~~~~~vi~~~k~g~~iyi~Nn~pYA~~LEyG~S~-----QAP~G~v~~t~~~~~~ 124 (134) T protein:vir:80 73 --------ALQVLQQTVGQYKAGDTVHITNNAPYIKELNSGSSQ-----QAPANFVETSIMRATR 124 (134) T ss_pred --------hHHHHHHHHhhccCcceEEEeeCchhhhhhhccccC-----CCcchHHHHHHHHHHH Confidence 1233445556666666 9999999999999999632 3568999999988755 No 6 >protein:vir:104347 Length: 145 # NCBI annotation: conserved phage-related protein # Family: family:all:448 # MgeID: mge:1593 # MgeName: RTP # Cross-refs: genbank:acc:YP_398975;genbank:gi:81343959;genbank:GeneID:3778879 Probab=97.72 E-value=1.9e-07 Score=57.41 Aligned_cols=131 Identities=24% Similarity=0.359 Sum_probs=88.6 Q ss_pred CCCC-CceeEEEecCchHHHHHHHHHHHHHhHhhhhhhhHHHhhhHHhhcCCcccCcceecccccccCCCccccccccCC Q lcl|NC_019407. 1 MKSG-GAKLSFYTDGNLEAAFKRFFATAEKRYDERADRLLIKLNELILARTPVWEGDTIHNWRWSTRAPDMRHEAPLDNG 79 (157) Q Consensus 1 mk~~-g~kl~~~~d~~~~~af~rff~~a~~~~~~r~~~lliklne~il~~tpvwegdti~nwrwstrapdm~he~p~~~g 79 (157) |-++ |+.++| +.-+..|-++.++.-+.......+++=..|..+|||=.|.-=-||.+|+..|+..--.+- T Consensus 1 ~~~~m~~~~sF------~~~i~~~~~~ve~~~~~v~r~~a~~i~~~vv~~sPVdTGr~Ranw~vs~~~~~~~~~~~~--- 71 (145) T protein:vir:10 1 MARNIGSVVTF------EKSIADWIDRAEDGFGIVVSNTVIKTANAIVDLSPVDTGRFKANWQISANSPAQQSLNEY--- 71 (145) T ss_pred CCCcccchhcc------ccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCccchhhccccceeeccccccccccc--- Confidence 6554 666665 444667778888888887788888887778889999999999999999999986543332 Q ss_pred CCCCcccCCCCccchhhhhhcchhhhhhhhhccCCceeEEEeccccchhhhhhcccCCchhhhcccceeeehhhhhcC Q lcl|NC_019407. 80 DPGRTSEMDLGQEPRRRVNETRPRQSLAGALRAKEPIDIYLTNTAESAVDLEYGLLPTRAQSRNKMGMVRISIKEVFG 157 (157) Q Consensus 80 dpg~t~~m~~g~eprr~~ne~rpr~slagalrak~pidiyltnt~~sav~leygllpt~~~sr~~~g~vr~~i~e~~~ 157 (157) ||+....- .+-.+.-.-++ .+|----||++|+..-|..||||- ......||||+++.+.-. T Consensus 72 d~~G~~t~---------~~~~~~~~~i~---~~k~g~~iyi~Nn~pYA~~LEyG~-----S~QAP~G~v~~~~~~~~~ 132 (145) T protein:vir:10 72 DQTGGQTK---------TYLARQARAVA---NSKATSVIYITNRLDYAADLEYGA-----SNQAPAGVLGVVQARLGR 132 (145) T ss_pred CCCCccch---------hhHHHHHHHhh---cccccceEEEeeCchhhhHhhccc-----cCCCcchHHHHHHHHHHH Confidence 33221110 00011111222 223334489999999999999994 223678999999877643 No 7 >protein:vir:107703 Length: 147 # NCBI annotation: hypothetical protein # Family: family:all:448 # MgeID: mge:1518 # MgeName: T1 # Cross-refs: genbank:acc:YP_003902;genbank:gi:45686318;genbank:GeneID:2773043 Probab=97.58 E-value=3.6e-07 Score=55.89 Aligned_cols=130 Identities=18% Similarity=0.260 Sum_probs=92.8 Q ss_pred CCCCCceeEEEecCchHHHHHHHHHHHHHhHhhhhhhhHHHhhhHHhhcCCcccCcceecccccccCCCccccccccCCC Q lcl|NC_019407. 1 MKSGGAKLSFYTDGNLEAAFKRFFATAEKRYDERADRLLIKLNELILARTPVWEGDTIHNWRWSTRAPDMRHEAPLDNGD 80 (157) Q Consensus 1 mk~~g~kl~~~~d~~~~~af~rff~~a~~~~~~r~~~lliklne~il~~tpvwegdti~nwrwstrapdm~he~p~~~gd 80 (157) |- =|-=..|+.-...|-++.+..-+.....+.+++-..|..+|||=.|.-=-||..|+-.|+..- .++-| T Consensus 1 ma-------~~~~~~F~~~i~~~~~~ve~~~~~~~r~~a~~i~~~vv~~sPVdTGr~Ranw~vs~~~~~~~~---~~~~d 70 (147) T protein:vir:10 1 MA-------NYQIRRFQGEIDAWINAAESTLEHAIEIFVRDVHDALVSRSPVDTGRFKGNWQITFNEIPNHA---LNRYD 70 (147) T ss_pred CC-------CcchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcchhhccccceeecCccccc---cCCcC Confidence 21 111125678889999999999999999999999888899999999999999999999988432 23334 Q ss_pred CCCcccCCCCccchhhhhhcchhhhhhhhhccCCce-eEEEeccccchhhhhhcccCCchhhhcccceeeehhhhhcC Q lcl|NC_019407. 81 PGRTSEMDLGQEPRRRVNETRPRQSLAGALRAKEPI-DIYLTNTAESAVDLEYGLLPTRAQSRNKMGMVRISIKEVFG 157 (157) Q Consensus 81 pg~t~~m~~g~eprr~~ne~rpr~slagalrak~pi-diyltnt~~sav~leygllpt~~~sr~~~g~vr~~i~e~~~ 157 (157) |. |+.. .+....-+++.+...++. -||++|+..=|..||||.- .....||||+++.+.-. T Consensus 71 p~-------g~~t-----~a~~~~~~~~~~~~~~~~~~iyi~Nn~pYA~~LEyG~S-----~QAP~G~V~~t~q~~~~ 131 (147) T protein:vir:10 71 KT-------GGVV-----RGEEQAKTYGMFSRGGAITSVHFSNMLIYANALEYGHS-----QQAPSGVVGLVALRLRS 131 (147) T ss_pred CC-------ccch-----hhhhhHHHHHHhhhccCcceEEEeeCcchhhhhhcccc-----CCCCchHHHHHHHHHHH Confidence 42 2221 122233345555445554 4899999999999999974 34678999999864432 No 8 >protein:vir:95157 Length: 144 # NCBI annotation: hypothetical protein ORF019 # Family: family:all:448 # MgeID: mge:1552 # MgeName: PA73 # Cross-refs: genbank:acc:YP_001293426;genbank:gi:148912847;genbank:GeneID:5228232 Probab=97.43 E-value=9.4e-07 Score=53.62 Aligned_cols=134 Identities=19% Similarity=0.228 Sum_probs=79.4 Q ss_pred CCCCCceeEEEecCchHHHHHHHHHHHHHhHhhhhhhhHHHhhhHHhhcCCcccCcceecccccccCCCccccccccCCC Q lcl|NC_019407. 1 MKSGGAKLSFYTDGNLEAAFKRFFATAEKRYDERADRLLIKLNELILARTPVWEGDTIHNWRWSTRAPDMRHEAPLDNGD 80 (157) Q Consensus 1 mk~~g~kl~~~~d~~~~~af~rff~~a~~~~~~r~~~lliklne~il~~tpvwegdti~nwrwstrapdm~he~p~~~gd 80 (157) |-.+ -+ .|+.....|-.+.|+.-+.....+.+++-..+..++||=.|.-=.||.-|..+|+-.--.|.+.+. T Consensus 1 MA~~--~~------~f~~~i~~~~~~ve~~~~~~~r~~a~~v~~~vv~~sPVDTGrfRanw~vs~~~p~~~~~~~~~~~~ 72 (144) T protein:vir:95 1 MAKS--LL------DLADRLEKKAKAIDEAASQNAVDTALAIVGDLAYKTPVDTSQALSNWIVTLESPSGQQIKPHFPGS 72 (144) T ss_pred Cchh--hh------hhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCccchhhccccceecccccccccccccccc Confidence 3221 11 355555666555444444444444444445556689999999999999999999876544443221 Q ss_pred CCCcccCCCCccchhhhhhcchhhhhhhhhccCCc-eeEEEeccccchhhhhhcccCCchhhhcccceeeehhhhhcC Q lcl|NC_019407. 81 PGRTSEMDLGQEPRRRVNETRPRQSLAGALRAKEP-IDIYLTNTAESAVDLEYGLLPTRAQSRNKMGMVRISIKEVFG 157 (157) Q Consensus 81 pg~t~~m~~g~eprr~~ne~rpr~slagalrak~p-idiyltnt~~sav~leygllpt~~~sr~~~g~vr~~i~e~~~ 157 (157) -|.| -+-++.+ -=..+...+..-++ --||++|+..-|..||||.- .....||||+++.|.-. T Consensus 73 ~~~t--~d~sg~~--------tl~~~~~vi~~~~~g~~iyi~NnlpYA~~LEyG~S-----~QAP~G~vr~~~q~~~~ 135 (144) T protein:vir:95 73 QGST--QRASAAE--------TLNSAKLVLRNKKPGQAIFITNNLPYIRRLNDGYS-----AQAPAGFVERAVLIGRK 135 (144) T ss_pred cccc--CCCchhH--------HHHHHHHHHhhcCccceEEEeeCchhhhhhhcccc-----CCCcchHHHHHHHHHHH Confidence 1111 1111110 00112222333333 34899999999999999974 33567999999999877 No 9 >protein:vir:97190 Length: 148 # NCBI annotation: hypothetical protein ORF030 # Family: family:all:448 # MgeID: mge:1657 # MgeName: M6 # Cross-refs: genbank:acc:YP_001294538;genbank:gi:149408259;genbank:GeneID:5237055 Probab=97.33 E-value=1e-06 Score=53.39 Aligned_cols=133 Identities=15% Similarity=0.159 Sum_probs=89.1 Q ss_pred CCCCCceeEEEecCchHHHHHHHHHHHHHhHhhhhhhhHHHhhhHHhhcCCcccCcceecccccccCCCccccccccCCC Q lcl|NC_019407. 1 MKSGGAKLSFYTDGNLEAAFKRFFATAEKRYDERADRLLIKLNELILARTPVWEGDTIHNWRWSTRAPDMRHEAPLDNGD 80 (157) Q Consensus 1 mk~~g~kl~~~~d~~~~~af~rff~~a~~~~~~r~~~lliklne~il~~tpvwegdti~nwrwstrapdm~he~p~~~gd 80 (157) |-+ ++ .|+.-...|-++.+..-+.......+++=..|..++||=.|.-=-||..|...|+..-.++.+... T Consensus 1 m~~---~~------sFa~~i~~~~~~ve~~~~~~~r~~a~~i~~~vv~~sPVdTGrfRanw~vs~~~p~~~~~~~~dp~~ 71 (148) T protein:vir:97 1 MPS---LS------EFSRRITLRGRKVAEGADALTRKVALAADQAVVSGTPVDTGRARSNWIAAIGSAPSSVIDAYSPGE 71 (148) T ss_pred CCc---cc------hhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcchhhhhhhheeecccccccccccCCCC Confidence 322 22 356667788888888888888888888777778899999999999999999999876544433222 Q ss_pred CCCcccCCCCccchhhhhhcchhhhhhhhhccCCc-eeEEEeccccchhhhhhcccCCchhhhcccceeeehhhhhcC Q lcl|NC_019407. 81 PGRTSEMDLGQEPRRRVNETRPRQSLAGALRAKEP-IDIYLTNTAESAVDLEYGLLPTRAQSRNKMGMVRISIKEVFG 157 (157) Q Consensus 81 pg~t~~m~~g~eprr~~ne~rpr~slagalrak~p-idiyltnt~~sav~leygllpt~~~sr~~~g~vr~~i~e~~~ 157 (157) -|.+-. +-| +++ =..+...+...++ --||++|+..-|..||||.-= ....||||+++.+.-. T Consensus 72 ~G~~~~-~~~-------~~~--i~~~~~vi~~~k~g~~iyi~NnlpYA~~LEyG~S~-----QAP~G~v~~t~~~~~~ 134 (148) T protein:vir:97 72 AGSTEA-ANT-------QAA--IDQAESVIRGYNYGEEIHITNNLPYIQRLNDGYSA-----QAPANFVEQAVLEAVQ 134 (148) T ss_pred CCcccc-cch-------hHH--HHHHHHHhhccCCCceEEEeecchhhhHhhccccC-----CCcchHHHHHHHHHHH Confidence 221110 001 111 0112233334443 358999999999999999632 3567999999988655 No 10 >protein:vir:78380 Length: 131 # NCBI annotation: hypothetical protein # Family: family:all:448 # MgeID: mge:1851 # MgeName: SETP3 # Cross-refs: genbank:acc:YP_001110844;genbank:gi:134288605;genbank:GeneID:5179643 Probab=97.30 E-value=1e-06 Score=53.41 Aligned_cols=121 Identities=22% Similarity=0.263 Sum_probs=85.9 Q ss_pred CchHHHHHHHHHHHHHhHhhhhhhhHHHhhhHHhhcCCcccCcceecccccccCCCccccccccCCCCCCcccCCCCccc Q lcl|NC_019407. 14 GNLEAAFKRFFATAEKRYDERADRLLIKLNELILARTPVWEGDTIHNWRWSTRAPDMRHEAPLDNGDPGRTSEMDLGQEP 93 (157) Q Consensus 14 ~~~~~af~rff~~a~~~~~~r~~~lliklne~il~~tpvwegdti~nwrwstrapdm~he~p~~~gdpg~t~~m~~g~ep 93 (157) =.|+.-+..|-++.++.-+.-.....+++-..|..++||=.|.-=-||.+|+..|+..-.. .-|| +..+.++ T Consensus 1 msf~~~i~~~~~~ve~~~~~~~r~~a~~~~~~iv~~sPVdTGr~Ranw~vs~~~~~~~~~~---~~d~--~g~~t~~--- 72 (131) T protein:vir:78 1 MSFALDVSKFVEKAKKNPEKVIRQVSIKLFSAIIKASPVDTGRFRMNWMASGGTPADGTTD---ATDK--AGTTATS--- 72 (131) T ss_pred CCcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhccccceecccccccccC---CCCC--CchhhHH--- Confidence 3455667788888998888888888888888888899999999999999999998843322 2222 2222221 Q ss_pred hhhhhhcchhhhhhhhhccCCceeEEEeccccchhhhhhcccCCchhhhcccceeeehhhhhcC Q lcl|NC_019407. 94 RRRVNETRPRQSLAGALRAKEPIDIYLTNTAESAVDLEYGLLPTRAQSRNKMGMVRISIKEVFG 157 (157) Q Consensus 94 rr~~ne~rpr~slagalrak~pidiyltnt~~sav~leygllpt~~~sr~~~g~vr~~i~e~~~ 157 (157) +-..-+++ +|----||++|+..=|..||||.- .....||||+++.+.-. T Consensus 73 -------~~~~~i~~---~~~g~~iyi~Nn~pYA~~LEyG~S-----~QAP~G~v~~~~~~~~~ 121 (131) T protein:vir:78 73 -------NAANFVLN---AADWHTFTLTNNLPYAQRLEYGWS-----QQAPQGFVRVNVSRFQQ 121 (131) T ss_pred -------HHHHHHhh---ccCCceEEEeeCchhhhHhhcccc-----CCCcchHHHHHHHHHHH Confidence 11112222 333345899999999999999975 33568999999877544 No 11 >protein:vir:103280 Length: 142 # NCBI annotation: phage-related hypothetical protein # Family: family:all:448 # MgeID: mge:1605 # MgeName: JK06 # Cross-refs: genbank:acc:YP_277459;genbank:gi:71834102;genbank:GeneID:3562391 Probab=97.20 E-value=2.2e-06 Score=51.64 Aligned_cols=128 Identities=19% Similarity=0.239 Sum_probs=90.5 Q ss_pred CCCCCceeEEEecCchHHHHHHHHHHHHHhHhhhhhhhHHHhhhHHhhcCCcccCcceecccccccCCCccccccccCCC Q lcl|NC_019407. 1 MKSGGAKLSFYTDGNLEAAFKRFFATAEKRYDERADRLLIKLNELILARTPVWEGDTIHNWRWSTRAPDMRHEAPLDNGD 80 (157) Q Consensus 1 mk~~g~kl~~~~d~~~~~af~rff~~a~~~~~~r~~~lliklne~il~~tpvwegdti~nwrwstrapdm~he~p~~~gd 80 (157) |-.+ - -.|++-...|-.+++..-+.-.....+++=..+..+|||=.|.-=-||..|+-.|+..-.. +=| T Consensus 1 Ma~~--~------~sf~~~i~~~~~~ve~~~~~v~r~~a~~i~~~vv~~sPVdTGr~R~nw~vs~~~~~~~~~~---~~d 69 (142) T protein:vir:10 1 MAND--V------VSFRNSINAWIDGVTEGVELIVEGTLTKATKDIVKLSPVDTGRFRGNWQATGNSPAAQSLN---NYD 69 (142) T ss_pred Cccc--h------hhhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccchhhcccceeeecCccccccc---CcC Confidence 3221 0 1466777888888888888877778888877778899999999999999999999865433 334 Q ss_pred CCCcccCCCCccchhhhhhcchhhhhhhhhccCCcee-EEEeccccchhhhhhcccCCchhhhcccceeeehhhhhcC Q lcl|NC_019407. 81 PGRTSEMDLGQEPRRRVNETRPRQSLAGALRAKEPID-IYLTNTAESAVDLEYGLLPTRAQSRNKMGMVRISIKEVFG 157 (157) Q Consensus 81 pg~t~~m~~g~eprr~~ne~rpr~slagalrak~pid-iyltnt~~sav~leygllpt~~~sr~~~g~vr~~i~e~~~ 157 (157) |+.+...+-|+ ...+.+..+++-| ||++|+..=|..||||.-= ....||||+++.+.-. T Consensus 70 ~~G~~t~~~~~-------------~~~~~i~~~~~g~~iyi~Nn~pYA~~LEyG~S~-----QAP~G~v~~a~q~~~~ 129 (142) T protein:vir:10 70 PDGNETRNSLR-------------RQIYALARDANTNVIYISNRLDYAQGLEFGSSN-----QAPSGVLGVVQKRLGR 129 (142) T ss_pred CCCccchhhHH-------------HHHHHhhhccccceEEEeeCcchhhhhhccccC-----CCcchHHHHHHHHHHH Confidence 54332222221 2234455555544 9999999999999999632 3568999999876544 No 12 >protein:vir:94654 Length: 142 # NCBI annotation: tail component protein # Family: family:all:1084 # MgeID: mge:1527 # MgeName: mu1/6 # Cross-refs: genbank:acc:YP_579211;genbank:gi:93007447;genbank:GeneID:5076773 Probab=62.96 E-value=0.29 Score=23.55 Aligned_cols=109 Identities=12% Similarity=0.122 Sum_probs=53.3 Q ss_pred CCCceeEEEecCchHHHHHHHHHHHHHhHhhhhhhhHHHhhhHHhhcCCcccCcceecccccccCCCccccccccCCCCC Q lcl|NC_019407. 3 SGGAKLSFYTDGNLEAAFKRFFATAEKRYDERADRLLIKLNELILARTPVWEGDTIHNWRWSTRAPDMRHEAPLDNGDPG 82 (157) Q Consensus 3 ~~g~kl~~~~d~~~~~af~rff~~a~~~~~~r~~~lliklne~il~~tpvwegdti~nwrwstrapdm~he~p~~~gdpg 82 (157) =++-++.|..| -|..+++.+.++.++..++=-+.....+-...-++|||=.|+.=-+|.|.... T Consensus 1 Ma~~~~~~~~~-~l~~~l~~~~~~~~~~~~~~l~~~a~~i~~~ak~~aPv~TG~Lr~SI~~~~~~--------------- 64 (142) T protein:vir:94 1 MAGLNYRVNST-EFQGALRAALDRLTGAAREATEAAANDMVNMAKGLCPVDTGRLRSSIQAVPSG--------------- 64 (142) T ss_pred CceeEEEecHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCccchhhhccceeeecc--------------- Confidence 12333334333 25566666655555443332233333344445778888666666666553211 Q ss_pred CcccCCCCccchhhhhhcchhhhhhhhhccCCceeEEEeccccchhhhhhcccCCchhhhcccceeeehhhhhcC Q lcl|NC_019407. 83 RTSEMDLGQEPRRRVNETRPRQSLAGALRAKEPIDIYLTNTAESAVDLEYGLLPTRAQSRNKMGMVRISIKEVFG 157 (157) Q Consensus 83 ~t~~m~~g~eprr~~ne~rpr~slagalrak~pidiyltnt~~sav~leygllpt~~~sr~~~g~vr~~i~e~~~ 157 (157) ....+-+.+.++++-|.-+|||-=|-.-..+.+++. .....+.++ T Consensus 65 -----------------------------~g~~~~~~v~~~~~YA~~vE~Gt~~~~i~pk~~k~l-~~~~~~~~~ 109 (142) T protein:vir:94 65 -----------------------------GRFSFSVTIGTNVTYAADVEYGTAPHVIVPKDKKAL-YWPGAAHPV 109 (142) T ss_pred -----------------------------CCceEEEEEecCcccchhhhccCCCceeccCCCccc-eecccceee Confidence 123456677788889999999954432222222221 222222222 No 13 >protein:vir:94538 Length: 125 # NCBI annotation: putative head to tail joining # Family: family:all:180 # MgeID: mge:1510 # MgeName: phiJL-1 # Cross-refs: genbank:acc:YP_223893;genbank:gi:62327105;genbank:GeneID:5075554 Probab=32.51 E-value=1.4 Score=19.83 Aligned_cols=109 Identities=14% Similarity=0.096 Sum_probs=53.3 Q ss_pred CCCCCceeEEEecCchHHHHHHHHHHHHHhHhhhhhhhHH----HhhhHHhhcCCcccCcceecccccccCCCccccccc Q lcl|NC_019407. 1 MKSGGAKLSFYTDGNLEAAFKRFFATAEKRYDERADRLLI----KLNELILARTPVWEGDTIHNWRWSTRAPDMRHEAPL 76 (157) Q Consensus 1 mk~~g~kl~~~~d~~~~~af~rff~~a~~~~~~r~~~lli----klne~il~~tpvwegdti~nwrwstrapdm~he~p~ 76 (157) |-++ .+|.++| |+. +.+.+++..+.-.+-..+-|- .+-+.+-.++||+.|+.--+|..+.-- . T Consensus 1 Ma~~---~~i~~~G-ld~-l~~~L~~~~~~~~~~v~~al~~~a~~i~~~ak~~ap~~tG~L~~sI~~~~~~--------~ 67 (125) T protein:vir:94 1 MAND---FNIKFKG-VDK-LLDEFDISRKELVPYSVEAMKTSLSRAVEKSKGLARVDTGYMRNNIQQDEVK--------E 67 (125) T ss_pred CCCc---eeeeehh-HHH-HHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCChhhhhhceeccee--------c Confidence 6655 7888887 543 334455555544444333332 233445678999999998898764210 0 Q ss_pred cCCCCCCcccCCCCccchhhhhhcchhhhhhhhhccCCceeEEEeccccchhhhhhcccCCchhhh------cccceeee Q lcl|NC_019407. 77 DNGDPGRTSEMDLGQEPRRRVNETRPRQSLAGALRAKEPIDIYLTNTAESAVDLEYGLLPTRAQSR------NKMGMVRI 150 (157) Q Consensus 77 ~~gdpg~t~~m~~g~eprr~~ne~rpr~slagalrak~pidiyltnt~~sav~leygllpt~~~sr------~~~g~vr~ 150 (157) ..| | +-+-+..+++-|.-+|||---.++|.= ..++.+.= T Consensus 68 ~~~--~---------------------------------~~~~v~~~~~Ya~~vEfGT~~~~a~Pfl~pa~~~~~~~~~~ 112 (125) T protein:vir:94 68 EHG--V---------------------------------VTGRYVARADYSSYNEYGTYRMSAQPFMAPSVAAMTPFFYK 112 (125) T ss_pred cCC--c---------------------------------EEEEeeCCCCccceeecccccCCCCcccchhHHHHHHHHHH Confidence 000 0 122233456678899999432222210 00111111 Q ss_pred hhhhhcC Q lcl|NC_019407. 151 SIKEVFG 157 (157) Q Consensus 151 ~i~e~~~ 157 (157) .|.+.+. T Consensus 113 ~l~~~l~ 119 (125) T protein:vir:94 113 AVRDALN 119 (125) T ss_pred HHHHHHH Confidence 1222222 No 14 >protein:vir:3617 Length: 112 # NCBI annotation: ORF40 # Family: family:all:180 # MgeID: mge:74 # MgeName: TP901-1 # Cross-refs: genbank:acc:NP_112703;genbank:gi:13786571;genbank:GeneID:921069 Probab=29.43 E-value=1.7 Score=19.38 Aligned_cols=105 Identities=14% Similarity=0.112 Sum_probs=51.6 Q ss_pred CCCCCceeEEEecCchHHHHHHHHHHHHHhHhhhh-hhhHHHhhhHHhhcCCcccCcceecccccccCCCccccccccCC Q lcl|NC_019407. 1 MKSGGAKLSFYTDGNLEAAFKRFFATAEKRYDERA-DRLLIKLNELILARTPVWEGDTIHNWRWSTRAPDMRHEAPLDNG 79 (157) Q Consensus 1 mk~~g~kl~~~~d~~~~~af~rff~~a~~~~~~r~-~~lliklne~il~~tpvwegdti~nwrwstrapdm~he~p~~~g 79 (157) |. .+|.++| |+...+++-..+++..-+++ ....-.+-+.+-.+|||+.|+.--+|..+... T Consensus 1 M~-----~~i~i~G-ld~l~~~L~~~~~~~~~~~al~~~~~~i~~~ak~~aPvdTG~Lr~si~~~~~~------------ 62 (112) T protein:vir:36 1 MK-----SSLSFKG-IDQLVKHLDKAASLKGVQQVVKSNTSNMTANMQKLVPVDTGYMKRSIKMELTE------------ 62 (112) T ss_pred Cc-----eeeeehh-HHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhCCCCchhhhhceeeeecC------------ Confidence 43 3466665 45444444333332211111 11122345567789999999999888754210 Q ss_pred CCCCcccCCCCccchhhhhhcchhhhhhhhhccCCceeEEEeccccchhhhhhcccCCchhhh------cccceeeehhh Q lcl|NC_019407. 80 DPGRTSEMDLGQEPRRRVNETRPRQSLAGALRAKEPIDIYLTNTAESAVDLEYGLLPTRAQSR------NKMGMVRISIK 153 (157) Q Consensus 80 dpg~t~~m~~g~eprr~~ne~rpr~slagalrak~pidiyltnt~~sav~leygllpt~~~sr------~~~g~vr~~i~ 153 (157) ..+-+.+.+.++-|.-+|||--=.++|.= ..+.-+.=.|+ T Consensus 63 ----------------------------------~~~~~~V~~~~~Ya~~vE~GT~k~~a~Pfl~pa~~~~~~~~~~~i~ 108 (112) T protein:vir:36 63 ----------------------------------GGFSGQAGPHTDYSAYVEYGTRFQSAQPFVKPAYNEQKGVFIKDLE 108 (112) T ss_pred ----------------------------------CceEEEeecCCCccceeeccccccCCCcchhhhHHHHHHHHHHHHH Confidence 11345566778889999999533222210 01111111223 Q ss_pred hhcC Q lcl|NC_019407. 154 EVFG 157 (157) Q Consensus 154 e~~~ 157 (157) +++- T Consensus 109 ~~lr 112 (112) T protein:vir:36 109 RLLK 112 (112) T ss_pred HHcC Confidence 3333 No 15 >protein:vir:79034 Length: 141 # NCBI annotation: hypothetical protein # Family: family:all:1892 # MgeID: mge:1861 # MgeName: phiC2 # Cross-refs: genbank:acc:YP_001110729;genbank:gi:134287346;genbank:GeneID:4955208 Probab=25.77 E-value=1.4 Score=19.72 Aligned_cols=115 Identities=18% Similarity=0.180 Sum_probs=56.2 Q ss_pred CCCC-CceeEEEecCchHHHHHHHHHH-HHHhHhhhhhhhHHHhhhHHhhcCCcccCcceecccccccCCCccccccccC Q lcl|NC_019407. 1 MKSG-GAKLSFYTDGNLEAAFKRFFAT-AEKRYDERADRLLIKLNELILARTPVWEGDTIHNWRWSTRAPDMRHEAPLDN 78 (157) Q Consensus 1 mk~~-g~kl~~~~d~~~~~af~rff~~-a~~~~~~r~~~lliklne~il~~tpvwegdti~nwrwstrapdm~he~p~~~ 78 (157) |-+- +-.++ -=..|...|++.... .++..+.-.+.+-.+|.+++-.+|||=.|.--.+|. . T Consensus 1 M~~~~~~d~~--gl~~~~~~l~~~~~~~~~~~~~~~~~~~a~~l~~~vk~~tPVdTG~Lr~sw~---------------~ 63 (141) T protein:vir:79 1 MARWGSVDFR--EFKRVCKKMEKLTKIDLDKFCKDAARELAARLLGKVIRRTPVDTGFLRQGWN---------------G 63 (141) T ss_pred CCCCccCcHH--HHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcchhhccccc---------------c Confidence 6552 22211 001233333333332 122333344555666777888999997776666662 1 Q ss_pred CCCCCcccCCCCccchhhhhhcchhhhhhhhhccCCceeEEEeccccchhhhhhcccCCchhhh----cccceeeehhhh Q lcl|NC_019407. 79 GDPGRTSEMDLGQEPRRRVNETRPRQSLAGALRAKEPIDIYLTNTAESAVDLEYGLLPTRAQSR----NKMGMVRISIKE 154 (157) Q Consensus 79 gdpg~t~~m~~g~eprr~~ne~rpr~slagalrak~pidiyltnt~~sav~leygllpt~~~sr----~~~g~vr~~i~e 154 (157) |..+...++..+ ....-|-+.|+++-|--+|||- ++++- .-.-|++.|+.| T Consensus 64 ~~~~~~~~~~~~----------------------g~~~~v~v~n~~~YA~~VE~Gh---r~~~~~gfV~G~fml~~s~~~ 118 (141) T protein:vir:79 64 VAYARSLPVYKQ----------------------GNNYIIEVVNPTEYASYVNFGH---RTKDGKGWVKGQHFLTISEME 118 (141) T ss_pred cccccccceeec----------------------CCeeEEEEecCCcchhhhhcce---eecCCcceeCCchhHHHHHHH Confidence 111111111000 0112356779999999999994 33321 112245566665 Q ss_pred hcC Q lcl|NC_019407. 155 VFG 157 (157) Q Consensus 155 ~~~ 157 (157) .-. T Consensus 119 ~~~ 121 (141) T protein:vir:79 119 LQS 121 (141) T ss_pred HHH Confidence 544 No 16 >protein:vir:102338 Length: 116 # NCBI annotation: hypothetical protein # Family: family:all:26573 # MgeID: mge:1566 # MgeName: phi CD119 # Cross-refs: genbank:acc:YP_529563;genbank:gi:90592648;genbank:GeneID:3974470 Probab=20.25 E-value=1.2 Score=20.09 Aligned_cols=84 Identities=23% Similarity=0.316 Sum_probs=46.7 Q ss_pred HHHHHHHHHHhHhhhhhhhHHHhhhHHhhcCCc---ccCcceecccccccCCCccccccccCCCCCCcccCCCCccchhh Q lcl|NC_019407. 20 FKRFFATAEKRYDERADRLLIKLNELILARTPV---WEGDTIHNWRWSTRAPDMRHEAPLDNGDPGRTSEMDLGQEPRRR 96 (157) Q Consensus 20 f~rff~~a~~~~~~r~~~lliklne~il~~tpv---wegdti~nwrwstrapdm~he~p~~~gdpg~t~~m~~g~eprr~ 96 (157) .++|++++ .+.+--+|..++-++||| +.|..=.+|.-. . T Consensus 1 l~~~~~~~-------~~~~a~~l~~~vk~rTPv~~~d~G~LR~sW~~g------------------~------------- 42 (116) T protein:vir:10 1 MSKNLRRA-------KNNIGNKLLRKVKPKTPVAKIDGGTARKSWKYK------------------E------------- 42 (116) T ss_pred CchHHHHH-------HHHHHHHHHHHHHhhCCCCcCCCcccccCceee------------------e------------- Confidence 33343333 234555677788899998 446666666311 0 Q ss_pred hhhcchhhhhhhhhccCCceeEEEeccccchhhhhhcccCCchh--------hhcccc------eeeehhhhhcC Q lcl|NC_019407. 97 VNETRPRQSLAGALRAKEPIDIYLTNTAESAVDLEYGLLPTRAQ--------SRNKMG------MVRISIKEVFG 157 (157) Q Consensus 97 ~ne~rpr~slagalrak~pidiyltnt~~sav~leygllpt~~~--------sr~~~g------~vr~~i~e~~~ 157 (157) ++ +.-.. +-|+++-|--+|||-=-.+-+ .|.+.| |+++|++|+-. T Consensus 43 v~--------------k~~~~--v~N~~eYA~~VE~GHRq~~g~g~~~~~~gkrlk~~~V~G~fml~~s~~e~~~ 101 (116) T protein:vir:10 43 LN--------------LFDGV--VSNNVEYIHHLEYGHRTRQGTGTSENYRPKPNGISFVPGVFMLARSVDEMSS 101 (116) T ss_pred ee--------------ccCce--eecCCcccccccCCceeeCCcceecccccccccCCccCceehHHHHHHHHHH Confidence 00 00011 459999999999995322111 233333 45677777655 Done!