Query lcl|NC_018856.1_cdsid_YP_006907310.1 [gene=D307_gp250] [protein=hypothetical protein] [protein_id=YP_006907310.1] [location=14661..15539] Match_columns 292 No_of_seqs 20 out of 22 Neff 3.9 Searched_HMMs 1612 Date Thu Nov 7 15:28:45 2013 Command /home/guerois/workspace/virfam/python/lib/hhsearch//hhsearch2 -i .//seq/seq_18 -d /home/guerois/workspace/virfam/python/profile_database/capsid_neck_tail.hhm -glob -cpu 7 -o .//seq/HHR/seq_18_vs_rec_db.hhr No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM 1 protein:vir:3160 Length: 198 # 98.2 8.8E-08 5.4E-11 59.3 11.9 194 19-288 1-198 (198) 2 protein:vir:80320 Length: 188 97.6 8.3E-06 5.1E-09 48.4 13.5 186 16-287 1-188 (188) 3 protein:vir:1435 Length: 188 # 97.2 4.2E-05 2.6E-08 44.6 13.6 185 23-287 1-188 (188) 4 protein:vir:8104 Length: 170 # 93.8 0.0059 3.7E-06 32.8 11.6 168 54-292 1-169 (170) 5 protein:vir:7857 Length: 188 # 93.3 0.0045 2.8E-06 33.4 10.1 182 44-290 1-188 (188) 6 protein:vir:101652 Length: 188 93.3 0.0045 2.8E-06 33.4 10.1 182 44-290 1-188 (188) 7 protein:vir:81255 Length: 180 92.4 0.011 7.1E-06 31.2 12.8 178 29-287 1-180 (180) 8 protein:vir:106428 Length: 306 86.8 0.043 2.7E-05 28.1 11.0 225 6-290 1-306 (306) 9 protein:vir:8326 Length: 201 # 83.6 0.067 4.2E-05 27.0 12.1 193 26-281 1-201 (201) 10 protein:vir:8430 Length: 189 # 79.0 0.11 6.8E-05 25.9 11.4 183 25-292 1-188 (189) 11 protein:vir:9928 Length: 118 # 74.3 0.084 5.2E-05 26.5 6.5 83 195-290 1-118 (118) 12 protein:vir:741 Length: 110 # 73.6 0.047 2.9E-05 27.9 5.0 81 195-292 1-107 (110) 13 protein:vir:3615 Length: 110 # 62.3 0.11 6.9E-05 25.8 4.6 101 159-292 1-107 (110) 14 protein:vir:9877 Length: 114 # 60.2 0.24 0.00015 24.0 6.0 84 195-292 1-114 (114) 15 protein:vir:3970 Length: 110 # 60.1 0.14 8.4E-05 25.3 4.7 101 159-292 1-107 (110) 16 protein:vir:80144 Length: 91 # 46.8 0.092 5.7E-05 26.3 1.4 84 36-126 1-91 (91) 17 protein:vir:95774 Length: 115 45.7 0.63 0.00039 21.7 5.8 86 195-292 1-115 (115) 18 protein:vir:101857 Length: 307 43.1 0.86 0.00053 20.9 8.5 229 1-290 1-307 (307) 19 protein:vir:101153 Length: 307 43.1 0.86 0.00053 20.9 8.5 229 1-290 1-307 (307) 20 protein:vir:99517 Length: 124 36.2 0.98 0.00061 20.6 5.3 88 159-292 1-112 (124) 21 protein:vir:94507 Length: 113 35.2 0.96 0.00059 20.7 5.1 83 195-292 1-113 (113) 22 protein:vir:95374 Length: 93 # 31.8 0.25 0.00015 23.9 1.3 89 20-127 1-93 (93) 23 protein:vir:964 Length: 93 # N 25.6 0.25 0.00015 23.9 0.2 86 21-142 1-93 (93) 24 protein:vir:100885 Length: 110 23.3 0.8 0.0005 21.1 2.5 92 29-158 1-110 (110) No 1 >protein:vir:3160 Length: 198 # NCBI annotation: unknown # Family: family:all:28414 # MgeID: mge:316 # MgeName: PhiCh1 # Cross-refs: genbank:acc:NP_665931;genbank:gi:22091117;genbank:GeneID:951344 Probab=98.18 E-value=8.8e-08 Score=59.27 Aligned_cols=194 Identities=20% Similarity=0.249 Sum_probs=115.2 Q ss_pred CCCChhhcccccccccCCCHHHHHHHHcCCceecCCCCcccCHHHHHHHHHHHHHHHHhHhCeeecccccccccccccCc Q lcl|NC_018856. 19 KLIDLDKIEELTLADYGFTVDAVKMNHFGIDVTDPRTKQPMPDAFYEASLEKAIAQVEKMLDIVILPRYNGEHHDYYRND 98 (292) Q Consensus 19 k~i~~~~~~~~t~~d~G~t~d~ik~~~fGi~~~dp~tG~~~~D~~l~~~i~~av~~~ek~Ldi~IlPR~~~e~~Dyy~sd 98 (292) -..++.++++--|-| ...||+..-+ .|+.++..|..|.+.+|+-.+-.+.+|-....-|||... T Consensus 1 ~~~~~~~~~~~~~~d---------Kk~Lgv~~d~-------~D~~le~LIa~ASa~~E~~~Gr~L~a~d~t~d~~r~~G~ 64 (198) T protein:vir:31 1 MPLEPSDVESELPFD---------AKAFGWSEEK-------FKSELETYIAAATETVEKWINTTLEPETVTRDLSRPSHV 64 (198) T ss_pred CCCCcccccccCchh---------hHhhcccccc-------hhhHHHHHHHHHHHHHHHhhCcEeccccceeccCcccCC Confidence 334556666555544 2456665444 478999999999999999999999888765555666633 Q ss_pred ccccceeeecchhheeeeeeeeecC---CCcccccCccceecccccceEEEecccccccccccccccccchhhhhhhccc Q lcl|NC_018856. 99 FESFMFIRTRQRPVLQMEKVTLEYG---GGTVFNYPTKWWRVYKLEGQLEMLPTLMLSEQGQSLNLAQVYSGYPMIAGIP 175 (292) Q Consensus 99 ~~s~~fv~lrkkPi~~V~k~~l~~~---g~~~~~~P~~w~~v~~~~G~l~~~pt~~m~~~~~~~~~~~~~sg~~~~~g~~ 175 (292) .+.=+.|-.+||+.|+.+.+--. |+++-.+ +.|... .++.+-+..+. .. . + T Consensus 65 --g~~~L~LPq~PV~sVsSV~iD~~~~~g~~v~~~-dy~l~~----~~~~~~~G~~r---------~~----~------p 118 (198) T protein:vir:31 65 --DGHDLPMPSRPVQDVVSVTIDTDRAMGRDVDED-DYWVEE----THLELKPGADR---------KS----W------P 118 (198) T ss_pred --CcceeecCCCCcceeEEEEEecCccccccccch-hhhhhh----hhhhhcccccc---------cc----c------c Confidence 34567888889999999988744 4444332 345333 22333222111 00 0 0 Q ss_pred ccCCcccCCceEEEEEEecCCchhhcCCCCcccCCHHHHHHHHHHHHHHHHHHhcceecccccCcceeeecceEeeccch Q lcl|NC_018856. 176 NLVGNNYAPQMFHVEYVAGMLPPKRRGVSREYEMPADLWTLVIKVALKEILQQWGRLIVGAGIASMSVNIDGISQSIDTT 255 (292) Q Consensus 176 ~~~g~~~aPq~~~vdYvAG~~~~~r~g~~~~~evpadL~~~I~K~a~i~vl~~wG~liIGAGIAs~S~svDgiseSi~TT 255 (292) . =+--.+|+|.||| .+||+|+++.|++++....=|+... ||-|.|+.=+-+| =+ T Consensus 119 ~------~~rnV~V~y~AGy-----------e~VPeDikeAVI~lv~~~~~e~~~~-----Gi~s~T~~gesvS----y~ 172 (198) T protein:vir:31 119 T------DRRCITVEWEYGY-----------EEVPESPKKAIIRLVRARLRAINAE-----GISSDTIMGDSIS----YD 172 (198) T ss_pred c------ccceEEEEeecCc-----------cccchHHHHHHHHHHHHHHhhhhcc-----cceeeeecCccee----ec Confidence 0 0226899999999 4499999999999999988877554 4444443222221 11 Q ss_pred hhhhhhhhHHHHHHHHHHHHHHHHHhhhhc-cee Q lcl|NC_018856. 256 QSAMYGGASADIMQLDRDIEDLVRGLKSFY-GIN 288 (292) Q Consensus 256 QSA~~~g~~ArI~ql~~dik~l~~~lk~~y-Gin 288 (292) |+ .--..|-..|..-.+ --+|| |+. T Consensus 173 --~~----~e~~~~~~~~~~~~~--~~~~~~~~~ 198 (198) T protein:vir:31 173 --PE----DEVVLAARKDVAGFE--APSYYGGVE 198 (198) T ss_pred --Cc----ccchhhhhhhhcccc--CcccccCCC Confidence 11 000122222322211 25678 466 No 2 >protein:vir:80320 Length: 188 # NCBI annotation: gp8, conserved hypothetical protein # Family: family:all:501 # MgeID: mge:1881 # MgeName: phi644-2 # Cross-refs: genbank:acc:YP_001111087;genbank:gi:134288682;genbank:GeneID:4960567 Probab=97.58 E-value=8.3e-06 Score=48.44 Aligned_cols=186 Identities=14% Similarity=0.097 Sum_probs=111.4 Q ss_pred CCCCCCChhhcccccccccCCCHHHHHHHHcCCceecCCCCcccCHHHHH-HHHHHHHHHHHhHhCeeeccccccccccc Q lcl|NC_018856. 16 NNEKLIDLDKIEELTLADYGFTVDAVKMNHFGIDVTDPRTKQPMPDAFYE-ASLEKAIAQVEKMLDIVILPRYNGEHHDY 94 (292) Q Consensus 16 ~npk~i~~~~~~~~t~~d~G~t~d~ik~~~fGi~~~dp~tG~~~~D~~l~-~~i~~av~~~ek~Ldi~IlPR~~~e~~Dy 94 (292) =+.. +-...|+.==+|.+++|..|. + |. . =+|+.+. .+|.+|.+.+|..++-.++++.-.+..|= T Consensus 1 M~~~------~~~~ppa~ePVtL~e~K~hLR-i---d~--~--~eD~~l~~~lI~aA~~~~E~~~gr~l~~qt~~~~~~~ 66 (188) T protein:vir:80 1 MAAV------LVEYLDDAEPLTFEEVAFQCR-I---DD--D--DERDFVERIVIPGARQAAESKSGAAIRKARYVERLSG 66 (188) T ss_pred CCce------eeccCCCCcccCHHHHHHHcC-C---CC--c--hhhHHHHHHHHHHHHHHHHHHhCCeeeeeeEEEEecC Confidence 1111 111234556679999999764 2 21 1 1577775 58999999999999999999766554331 Q ss_pred ccCcccccceeeecchhheeeeeeeeecCCCcccccCccceecccccceEEEecccccccccccccccccchhhhhhhcc Q lcl|NC_018856. 95 YRNDFESFMFIRTRQRPVLQMEKVTLEYGGGTVFNYPTKWWRVYKLEGQLEMLPTLMLSEQGQSLNLAQVYSGYPMIAGI 174 (292) Q Consensus 95 y~sd~~s~~fv~lrkkPi~~V~k~~l~~~g~~~~~~P~~w~~v~~~~G~l~~~pt~~m~~~~~~~~~~~~~sg~~~~~g~ 174 (292) .+. ..+.|.+.||..|++++..-.......++..=+.+........+.++... . + T Consensus 67 ~~~-----~~i~Lp~~PV~sV~sV~~~d~~G~~~~l~~~~y~l~~~~~~~~l~~~~~~--------------~------~ 121 (188) T protein:vir:80 67 FPL-----AEISLSVGQVIRVDSIEIRDASGATTTLDADAFELVQLGREALLVPEGQA--------------R------W 121 (188) T ss_pred CCC-----CceEecccccceeeEEEEEcCCCcEEeecccceEEeecCCCcEEEEecCC--------------C------C Confidence 122 34789999999999999888766677777655577666544444443110 0 0 Q ss_pred cccCCcccCCceEEEEEEecCCchhhcCCCCcccCCHHHHHHHHHHHHHHHHHHhcceecccccCcceee-ecceEeecc Q lcl|NC_018856. 175 PNLVGNNYAPQMFHVEYVAGMLPPKRRGVSREYEMPADLWTLVIKVALKEILQQWGRLIVGAGIASMSVN-IDGISQSID 253 (292) Q Consensus 175 ~~~~g~~~aPq~~~vdYvAG~~~~~r~g~~~~~evpadL~~~I~K~a~i~vl~~wG~liIGAGIAs~S~s-vDgiseSi~ 253 (292) + ....++|+|+|||- .++|+++++.|+.+++- .++.=+....|.+++....+ +|.+ T Consensus 122 p-------~~~~V~V~~~AG~~----------~~vP~~ik~aill~va~-~Ye~Re~~~~g~~~~~~P~~~v~~L----- 178 (188) T protein:vir:80 122 P-------FARAVTITYQAGVD----------LARYPSVRTWMLLAAAW-AYDHRELFSEGQPIGEMPGGYADVL----- 178 (188) T ss_pred C-------CCceEEEEEEeccc----------ccChHHHHHHHHHHHHH-HHhcccccccccccccccHHHHHHH----- Confidence 1 12369999999991 24899999988887764 34443444555444433322 2221 Q ss_pred chhhhhhhhhHHHHHHHHHHHHHHHHHhhhhcce Q lcl|NC_018856. 254 TTQSAMYGGASADIMQLDRDIEDLVRGLKSFYGI 287 (292) Q Consensus 254 TTQSA~~~g~~ArI~ql~~dik~l~~~lk~~yGi 287 (292) +...+-==|- T Consensus 179 ------------------------l~pyRvp~~~ 188 (188) T protein:vir:80 179 ------------------------LNPITVPPRF 188 (188) T ss_pred ------------------------hhccCCCCCC Confidence 1111000012 No 3 >protein:vir:1435 Length: 188 # NCBI annotation: hypothetical protein # Family: family:all:501 # MgeID: mge:30 # MgeName: phiE125 # Cross-refs: genbank:acc:NP_536364;genbank:gi:17975169;genbank:GeneID:929149 Probab=97.22 E-value=4.2e-05 Score=44.57 Aligned_cols=185 Identities=12% Similarity=0.112 Sum_probs=106.4 Q ss_pred hhhccc-ccccccCCCHHHHHHHHcCCceecCCCCcccCHHHH-HHHHHHHHHHHHhHhCeeecccccccccccccCccc Q lcl|NC_018856. 23 LDKIEE-LTLADYGFTVDAVKMNHFGIDVTDPRTKQPMPDAFY-EASLEKAIAQVEKMLDIVILPRYNGEHHDYYRNDFE 100 (292) Q Consensus 23 ~~~~~~-~t~~d~G~t~d~ik~~~fGi~~~dp~tG~~~~D~~l-~~~i~~av~~~ek~Ldi~IlPR~~~e~~Dyy~sd~~ 100 (292) -.-+-. -.|+.==+|.+++|.+|. ++ . . -+|+.+ ..+|.+|.+.+|..++-.++++..+...|-... T Consensus 1 m~~~~~~~ppa~epVtLae~K~~lr-id---~--~--~eD~~l~~~li~aA~~~~E~~tgr~l~~qt~~~~~~~~~~--- 69 (188) T protein:vir:14 1 MAAVLVEYLDDAEPLTFEEVAFQCR-ID---D--D--DERDFVERVVIPGARQAAESKAGAAIRKARYVEHLSGFPP--- 69 (188) T ss_pred CCceeeecCCCCCccCHHHHHHHcC-CC---C--c--hhHHHHHHHHHHHHHHHHHHHhCCeeeeeeEEEEecCcCC--- Confidence 111111 123445568899998764 32 1 1 157777 569999999999999999999776655442222 Q ss_pred ccceeeecchhheeeeeeeeecCCCcccccCccceecccccceEEEecccccccccccccccccchhhhhhhcccccCCc Q lcl|NC_018856. 101 SFMFIRTRQRPVLQMEKVTLEYGGGTVFNYPTKWWRVYKLEGQLEMLPTLMLSEQGQSLNLAQVYSGYPMIAGIPNLVGN 180 (292) Q Consensus 101 s~~fv~lrkkPi~~V~k~~l~~~g~~~~~~P~~w~~v~~~~G~l~~~pt~~m~~~~~~~~~~~~~sg~~~~~g~~~~~g~ 180 (292) .-+.|-+.||..|++++..-....-..++..=|.+......-.+.+.. + ... + T Consensus 70 --~~~~Lp~~Pv~sV~sV~~~d~~g~~~~l~~~~y~l~~~~~~~~l~~~~-----~---------~~~------p----- 122 (188) T protein:vir:14 70 --AEVPLSVGQVISVDSIEIRDASGATTTLDAGAFELVQLGRETLLVPAG-----Q---------ARW------P----- 122 (188) T ss_pred --CceEecccCcceeeEEEEEcCCCceEeecccceEEeecCCCcEEEEec-----C---------CCC------C----- Confidence 237789999999999998777666677766555665543221222210 0 000 0 Q ss_pred ccCCceEEEEEEecCCchhhcCCCCcccCCHHHHHHHHHHHHHHHHHHhcceecccccCcceee-ecceEeeccchhhhh Q lcl|NC_018856. 181 NYAPQMFHVEYVAGMLPPKRRGVSREYEMPADLWTLVIKVALKEILQQWGRLIVGAGIASMSVN-IDGISQSIDTTQSAM 259 (292) Q Consensus 181 ~~aPq~~~vdYvAG~~~~~r~g~~~~~evpadL~~~I~K~a~i~vl~~wG~liIGAGIAs~S~s-vDgiseSi~TTQSA~ 259 (292) ....++|+|+|||- .++|+++++.|+.+++- .++.=+....|.+.+....+ +| T Consensus 123 --~~~~V~V~~~AG~~----------~~vP~~ik~Aill~va~-~Y~~Re~~~~g~~~~~lP~~~v~------------- 176 (188) T protein:vir:14 123 --YARAVTIKYQAGID----------LARYPSVRSWMLLAAAW-AYDHRELYSDGQPMGEMPGGYSD------------- 176 (188) T ss_pred --CCceEEEEEEecCc----------cCchHHHHHHHHHHHHH-HHhcccccccccccccccHHHHH------------- Confidence 02369999999992 14899999988877663 34333444444433332222 12 Q ss_pred hhhhHHHHHHHHHHHHHHHHHhhhhcce Q lcl|NC_018856. 260 YGGASADIMQLDRDIEDLVRGLKSFYGI 287 (292) Q Consensus 260 ~~g~~ArI~ql~~dik~l~~~lk~~yGi 287 (292) .|+...+-==|- T Consensus 177 ----------------~Ll~pyRvP~~~ 188 (188) T protein:vir:14 177 ----------------VLLNPITVPPRF 188 (188) T ss_pred ----------------HHhhccCCCCCC Confidence 122211100022 No 4 >protein:vir:8104 Length: 170 # NCBI annotation: gp8 # Family: family:all:3238 # MgeID: mge:152 # MgeName: Che9c # Cross-refs: genbank:acc:NP_817685;genbank:gi:29566116;genbank:GeneID:1259310 Probab=93.84 E-value=0.0059 Score=32.81 Aligned_cols=168 Identities=12% Similarity=0.015 Sum_probs=98.0 Q ss_pred CCCcccCHHHHHHHHHHHHHHHHhHhCeeecccccccccccccCcccccceeeecchhheeeeeeeeecCCCcccccCcc Q lcl|NC_018856. 54 RTKQPMPDAFYEASLEKAIAQVEKMLDIVILPRYNGEHHDYYRNDFESFMFIRTRQRPVLQMEKVTLEYGGGTVFNYPTK 133 (292) Q Consensus 54 ~tG~~~~D~~l~~~i~~av~~~ek~Ldi~IlPR~~~e~~Dyy~sd~~s~~fv~lrkkPi~~V~k~~l~~~g~~~~~~P~~ 133 (292) -+|.--+|.-.|..|+.|.+++++.-++-|-|=...+...+.-+ ....+.|=-+||..|+.++ .+|..+ ..-+- T Consensus 1 ~~~~~a~~~~~q~~l~aA~a~vR~~cGwhv~P~v~d~t~~ldg~---G~~vl~LPt~pvvsV~sV~--~~G~~l-~~~~~ 74 (170) T protein:vir:81 1 MRGQFADNTEAQAAIDAVLAAARRWCGWHVSPVIIDDVMEVDGP---GGRVLSLPTLNLVSVKSVV--ELGYAL-DVSTL 74 (170) T ss_pred CcccccCchHHHHHHHHHHHHHHHHhCCcccceecccEEEEeCC---CCeeEECCCCcceeeEEEE--ECCeee-cCccc Confidence 55778888999999999999999999999999665555444332 2367888889999999986 334332 11122 Q ss_pred ceecccccceEEEecccccccccccccccccchhhhhhhcccccCCcccCCceEEEEEEecCCchhhcCCCCcccCCHHH Q lcl|NC_018856. 134 WWRVYKLEGQLEMLPTLMLSEQGQSLNLAQVYSGYPMIAGIPNLVGNNYAPQMFHVEYVAGMLPPKRRGVSREYEMPADL 213 (292) Q Consensus 134 w~~v~~~~G~l~~~pt~~m~~~~~~~~~~~~~sg~~~~~g~~~~~g~~~aPq~~~vdYvAG~~~~~r~g~~~~~evpadL 213 (292) || +...|.|. . . +| .++. -+..+.|.|.+||. +-|+|.++ T Consensus 75 ~~--~~~~glL~---r-----------~----~G-----~~~~------~~~~V~VT~tHGy~---------~~~apd~~ 114 (170) T protein:vir:81 75 DR--SRRKGTLT---K-----------P----YG-----RWTA------RDGAIVVTATHGFT---------ETEAADWR 114 (170) T ss_pred ee--ecCCceEE---e-----------c----CC-----cccc------ccceEEEEEEeCCC---------CCccchHH Confidence 22 23334333 0 0 11 0000 14579999999993 23467888 Q ss_pred HHHHHHHHHHHHHHHhcceecccccC-cceeeecceEeeccchhhhhhhhhHHHHHHHHHHHHHHHHHhhhhcceeEeeC Q lcl|NC_018856. 214 WTLVIKVALKEILQQWGRLIVGAGIA-SMSVNIDGISQSIDTTQSAMYGGASADIMQLDRDIEDLVRGLKSFYGINLGII 292 (292) Q Consensus 214 ~~~I~K~a~i~vl~~wG~liIGAGIA-s~S~svDgiseSi~TTQSA~~~g~~ArI~ql~~dik~l~~~lk~~yGin~g~i 292 (292) .++|+.+|- +.+. +.|++ ..|.+++++|-+-.+ .|+.-. ..-++ +.++| .+|-+ T Consensus 115 ~~vi~~~a~-r~~~-------s~~~~~l~~~~~~~vs~~~~~--~~~s~~---------~~~~~----iL~~Y--rl~~~ 169 (170) T protein:vir:81 115 RAVVQLVGR-RAQT-------SRPSADLKRKKVDDVEYEWFE--TAVSVD---------AELSA----VFSPF--RILPS 169 (170) T ss_pred HHHHHHHHH-Hhhc-------cCCcccceeeeccceeeeecc--cccccC---------HHHHH----hhhhc--ccCCC Confidence 888875444 4432 22444 788888888766532 111111 11112 22233 11122 No 5 >protein:vir:7857 Length: 188 # NCBI annotation: gp14 # Family: family:all:11114 # MgeID: mge:150 # MgeName: CJW1 # Cross-refs: genbank:acc:NP_817464;genbank:gi:29565893;genbank:GeneID:1259086 Probab=93.33 E-value=0.0045 Score=33.43 Aligned_cols=182 Identities=18% Similarity=0.187 Sum_probs=105.6 Q ss_pred HHcCCceecCCCCcccCHHHHHHHHHHHHHHHHhHhCeeeccc-ccccccccccCcccccceeeecchhheeeeeeeeec Q lcl|NC_018856. 44 NHFGIDVTDPRTKQPMPDAFYEASLEKAIAQVEKMLDIVILPR-YNGEHHDYYRNDFESFMFIRTRQRPVLQMEKVTLEY 122 (292) Q Consensus 44 ~~fGi~~~dp~tG~~~~D~~l~~~i~~av~~~ek~Ldi~IlPR-~~~e~~Dyy~sd~~s~~fv~lrkkPi~~V~k~~l~~ 122 (292) +-|.-.+.+.- -++-.|..+ .++.|-..+++.-++.|-|- -..+..|-+-+. ..|-.+|+..|.+++... T Consensus 1 ~~~~~~la~~~-~~da~~v~l--AL~~As~~VR~~~g~~i~~V~~dt~~id~~Gg~------~~LP~~Pvv~i~~Ve~~~ 71 (188) T protein:vir:78 1 MTFAQQLADAF-PEDADDAAT--ALSWAKSQVEGYCGRKFDLVEDDVAIVDPYCGS------SLLPSIPVVEISKVEGYL 71 (188) T ss_pred CchhhhHHHhc-CCCcchHHH--HHHHHHHHHHHHhCCcceeeeeeeeeeecCCCc------eeeccCcceeeeEEEEEe Confidence 22332232211 223445555 69999999999999999873 333556655544 256788999999997755 Q ss_pred C-CCcccccCccceeccc--ccceEE-EecccccccccccccccccchhhhhhhcccccCCcccCCceEEEEEEecCCch Q lcl|NC_018856. 123 G-GGTVFNYPTKWWRVYK--LEGQLE-MLPTLMLSEQGQSLNLAQVYSGYPMIAGIPNLVGNNYAPQMFHVEYVAGMLPP 198 (292) Q Consensus 123 ~-g~~~~~~P~~w~~v~~--~~G~l~-~~pt~~m~~~~~~~~~~~~~sg~~~~~g~~~~~g~~~aPq~~~vdYvAG~~~~ 198 (292) + |..+ .||++.. ..|.-= ++=+ .+++-.+-.... |+| .+|.+-+|.|.=|| T Consensus 72 ~~G~~~-----~~v~~r~y~~~g~~~~l~~t-----rg~pg~~~~r~~------~WP------w~p~~VtVTytHGy--- 126 (188) T protein:vir:78 72 PTGNGM-----DWVELTNYWFKRDTGLIFDT-----TGLPGSEWSTGH------TWP------WLPGSLRVTYTHGY--- 126 (188) T ss_pred eCCccc-----ccccccccccccceeeeccc-----ccCccccccccc------ccc------cCcceEEEEEecCC--- Confidence 5 4333 2333321 111110 0110 111111111112 233 57999999999999 Q ss_pred hhcCCCCcccCCHHHHHHHHHHHHHHHHHHhcceecccccCcceeeecceEeeccchhhhhhhhhHHHHHHHHHHHHHHH Q lcl|NC_018856. 199 KRRGVSREYEMPADLWTLVIKVALKEILQQWGRLIVGAGIASMSVNIDGISQSIDTTQSAMYGGASADIMQLDRDIEDLV 278 (292) Q Consensus 199 ~r~g~~~~~evpadL~~~I~K~a~i~vl~~wG~liIGAGIAs~S~svDgiseSi~TTQSA~~~g~~ArI~ql~~dik~l~ 278 (292) -|||+|+.++|..+|.--..+- . .=.+..||..|++..+|=++. |.+.. T Consensus 127 --------~evP~eiv~lv~d~A~~~~~np------~---~L~q~~vG~~S~tfa~~~~~s--------------l~~~~ 175 (188) T protein:vir:78 127 --------NPVPDELIDVAIRLAREYQSNP------E---LLVSKQVGEIERRFGSVAGTS--------------LSKAD 175 (188) T ss_pred --------CcccHHHHHHHHHHHHHHhcCc------c---cceeeecCceeeecccccCCc--------------ccchh Confidence 5699999999999987665542 1 346789999999998754442 33344 Q ss_pred HHhhhhcc-eeEe Q lcl|NC_018856. 279 RGLKSFYG-INLG 290 (292) Q Consensus 279 ~~lk~~yG-in~g 290 (292) ++...+|= ..+. T Consensus 176 ~~il~ry~l~~~~ 188 (188) T protein:vir:78 176 QAILDRYVIATLA 188 (188) T ss_pred HHhhccccccccC Confidence 45555552 1111 No 6 >protein:vir:101652 Length: 188 # NCBI annotation: gp15 # Family: family:all:11114 # MgeID: mge:1515 # MgeName: 244 # Cross-refs: genbank:acc:YP_654770;genbank:gi:109302768;genbank:GeneID:4156086 Probab=93.33 E-value=0.0045 Score=33.43 Aligned_cols=182 Identities=18% Similarity=0.187 Sum_probs=105.6 Q ss_pred HHcCCceecCCCCcccCHHHHHHHHHHHHHHHHhHhCeeeccc-ccccccccccCcccccceeeecchhheeeeeeeeec Q lcl|NC_018856. 44 NHFGIDVTDPRTKQPMPDAFYEASLEKAIAQVEKMLDIVILPR-YNGEHHDYYRNDFESFMFIRTRQRPVLQMEKVTLEY 122 (292) Q Consensus 44 ~~fGi~~~dp~tG~~~~D~~l~~~i~~av~~~ek~Ldi~IlPR-~~~e~~Dyy~sd~~s~~fv~lrkkPi~~V~k~~l~~ 122 (292) +-|.-.+.+.- -++-.|..+ .++.|-..+++.-++.|-|- -..+..|-+-+. ..|-.+|+..|.+++... T Consensus 1 ~~~~~~la~~~-~~da~~v~l--AL~~As~~VR~~~g~~i~~V~~dt~~id~~Gg~------~~LP~~Pvv~i~~Ve~~~ 71 (188) T protein:vir:10 1 MTFAQQLADAF-PEDADDAAT--ALSWAKSQVEGYCGRKFDLVEDDVAIVDPYCGS------SLLPSIPVVEISKVEGYL 71 (188) T ss_pred CchhhhHHHhc-CCCcchHHH--HHHHHHHHHHHHhCCcceeeeeeeeeeecCCCc------eeeccCcceeeeEEEEEe Confidence 22332232211 223445555 69999999999999999873 333556655544 256788999999997755 Q ss_pred C-CCcccccCccceeccc--ccceEE-EecccccccccccccccccchhhhhhhcccccCCcccCCceEEEEEEecCCch Q lcl|NC_018856. 123 G-GGTVFNYPTKWWRVYK--LEGQLE-MLPTLMLSEQGQSLNLAQVYSGYPMIAGIPNLVGNNYAPQMFHVEYVAGMLPP 198 (292) Q Consensus 123 ~-g~~~~~~P~~w~~v~~--~~G~l~-~~pt~~m~~~~~~~~~~~~~sg~~~~~g~~~~~g~~~aPq~~~vdYvAG~~~~ 198 (292) + |..+ .||++.. ..|.-= ++=+ .+++-.+-.... |+| .+|.+-+|.|.=|| T Consensus 72 ~~G~~~-----~~v~~r~y~~~g~~~~l~~t-----rg~pg~~~~r~~------~WP------w~p~~VtVTytHGy--- 126 (188) T protein:vir:10 72 PTGNGM-----DWVELTNYWFKRDTGLIFDT-----TGLPGSEWSTGH------TWP------WLPGSLRVTYTHGY--- 126 (188) T ss_pred eCCccc-----ccccccccccccceeeeccc-----ccCccccccccc------ccc------cCcceEEEEEecCC--- Confidence 5 4333 2333321 111110 0110 111111111112 233 57999999999999 Q ss_pred hhcCCCCcccCCHHHHHHHHHHHHHHHHHHhcceecccccCcceeeecceEeeccchhhhhhhhhHHHHHHHHHHHHHHH Q lcl|NC_018856. 199 KRRGVSREYEMPADLWTLVIKVALKEILQQWGRLIVGAGIASMSVNIDGISQSIDTTQSAMYGGASADIMQLDRDIEDLV 278 (292) Q Consensus 199 ~r~g~~~~~evpadL~~~I~K~a~i~vl~~wG~liIGAGIAs~S~svDgiseSi~TTQSA~~~g~~ArI~ql~~dik~l~ 278 (292) -|||+|+.++|..+|.--..+- . .=.+..||..|++..+|=++. |.+.. T Consensus 127 --------~evP~eiv~lv~d~A~~~~~np------~---~L~q~~vG~~S~tfa~~~~~s--------------l~~~~ 175 (188) T protein:vir:10 127 --------NPVPDELIDVAIRLAREYQSNP------E---LLVSKQVGEIERRFGSVAGTS--------------LSKAD 175 (188) T ss_pred --------CcccHHHHHHHHHHHHHHhcCc------c---cceeeecCceeeecccccCCc--------------ccchh Confidence 5699999999999987665542 1 346789999999998754442 33344 Q ss_pred HHhhhhcc-eeEe Q lcl|NC_018856. 279 RGLKSFYG-INLG 290 (292) Q Consensus 279 ~~lk~~yG-in~g 290 (292) ++...+|= ..+. T Consensus 176 ~~il~ry~l~~~~ 188 (188) T protein:vir:10 176 QAILDRYVIATLA 188 (188) T ss_pred HHhhccccccccC Confidence 45555552 1111 No 7 >protein:vir:81255 Length: 180 # NCBI annotation: gp8 # Family: family:all:3238 # MgeID: mge:1893 # MgeName: BFK20 # Cross-refs: genbank:acc:YP_001456738;genbank:gi:157168381;uniprot:Q9MBJ7;genbank:GeneID:5580378 Probab=92.43 E-value=0.011 Score=31.23 Aligned_cols=178 Identities=13% Similarity=0.170 Sum_probs=94.2 Q ss_pred ccccccCCCHHHHHHHHcCCceecCCCCcccCHHHHHHHHHHHHHHHHhHhCeeecccccccccccccCcccccceeeec Q lcl|NC_018856. 29 LTLADYGFTVDAVKMNHFGIDVTDPRTKQPMPDAFYEASLEKAIAQVEKMLDIVILPRYNGEHHDYYRNDFESFMFIRTR 108 (292) Q Consensus 29 ~t~~d~G~t~d~ik~~~fGi~~~dp~tG~~~~D~~l~~~i~~av~~~ek~Ldi~IlPR~~~e~~Dyy~sd~~s~~fv~lr 108 (292) +.|. =++||+....+.-|+...+.+ + +..|+.|.+++++.-++-|.|-...+- -+ |-.....+.|= T Consensus 1 ~~~p-~~l~p~~~~~~~~g~~~~~~~-------~--q~~l~aA~aavRr~cGwhv~pv~~~t~-~l---dg~G~~~l~LP 66 (180) T protein:vir:81 1 MQPP-HGLTPEILRTYPGGHLLSKDL-------T--QEHVDAVVATVRKLCGWHVFPVATTEY-SF---PWRGDPEFLVP 66 (180) T ss_pred CCCC-ccCCcchhhhhhccccCCchh-------h--HHHHHHHHHHHHHHhCCcccceeeeEE-EE---ecCCCeeEeCC Confidence 2222 156777777777666554422 2 789999999999999999999544221 11 22223577788 Q ss_pred chhheeeeeeeeecCCCcccccCccceecccccceEEEecccccccccccccccccchhhhhhhcccccCCcccCCceEE Q lcl|NC_018856. 109 QRPVLQMEKVTLEYGGGTVFNYPTKWWRVYKLEGQLEMLPTLMLSEQGQSLNLAQVYSGYPMIAGIPNLVGNNYAPQMFH 188 (292) Q Consensus 109 kkPi~~V~k~~l~~~g~~~~~~P~~w~~v~~~~G~l~~~pt~~m~~~~~~~~~~~~~sg~~~~~g~~~~~g~~~aPq~~~ 188 (292) -+||..|++++. +|..+-.---.| -.+...|-|+.- +|- ..+| +..+. T Consensus 67 t~~vvsV~sV~~--dG~~v~~~~~~~-~~~~~~G~l~r~------------------~G~-~~rg----------~~~V~ 114 (180) T protein:vir:81 67 TKRLVSVESVTC--GDLSIPNEDIVF-YPYGEVNLLRRV------------------HGT-PWRV----------ARPMT 114 (180) T ss_pred CCcceeeeeEEE--CCeeeCCcccee-cccCCCCeeEec------------------CCc-cccc----------cceEE Confidence 889999999885 443331111112 112333444411 110 0111 34789 Q ss_pred EEEEecCCchhhcCCCCcccCCHHHHHHHHHHHHHHHHHHhcceecccccCcceeeecceEeeccchhhhhhhhhHHHHH Q lcl|NC_018856. 189 VEYVAGMLPPKRRGVSREYEMPADLWTLVIKVALKEILQQWGRLIVGAGIASMSVNIDGISQSIDTTQSAMYGGASADIM 268 (292) Q Consensus 189 vdYvAG~~~~~r~g~~~~~evpadL~~~I~K~a~i~vl~~wG~liIGAGIAs~S~svDgiseSi~TTQSA~~~g~~ArI~ 268 (292) |.|.+|| .++| +...+|+-.|.. ..+. -++|+ .|.+++|+|=+-.+-.|-+ T Consensus 115 Vt~~hGy-----------e~vP-~~~aVi~~~a~r-a~~s-----~~~~v--~~~tvG~~S~~~~~~~~~~--------- 165 (180) T protein:vir:81 115 VTMTHGY-----------EDAP-GLVGVIAQMLTR-AFTS-----TGGGD--GNLTVGNMSYGLSTGITPK--------- 165 (180) T ss_pred EEEEeCC-----------CCCc-hHHHHHHHHHHH-hccc-----ccccc--ccceecceeeccccCCCcc--------- Confidence 9999999 4477 445665444433 3332 12233 3466667664222222221 Q ss_pred HHHHHHHHHHHHhhhhc--ce Q lcl|NC_018856. 269 QLDRDIEDLVRGLKSFY--GI 287 (292) Q Consensus 269 ql~~dik~l~~~lk~~y--Gi 287 (292) ++.+..|..|. |. T Consensus 166 ------~~e~aiLdrYrl~~~ 180 (180) T protein:vir:81 166 ------SSEWLIIDQYRLHPV 180 (180) T ss_pred ------HHHHHHHHhhhccCC Confidence 11133333333 34 No 8 >protein:vir:106428 Length: 306 # NCBI annotation: gp13 neck protein # Family: family:all:1103 # MgeID: mge:1474 # MgeName: Aeh1 # Cross-refs: genbank:acc:NP_944100;genbank:gi:38640144;genbank:GeneID:2658189 Probab=86.76 E-value=0.043 Score=28.06 Aligned_cols=225 Identities=19% Similarity=0.260 Sum_probs=111.6 Q ss_pred cCCCCCccccCCCCCCChhhcccccccccCCCHHHHHHH-Hc--CCceecCCCCcccCHHHHHHHHHHHHHHHHhH-hCe Q lcl|NC_018856. 6 MHQDGTQYQHNNEKLIDLDKIEELTLADYGFTVDAVKMN-HF--GIDVTDPRTKQPMPDAFYEASLEKAIAQVEKM-LDI 81 (292) Q Consensus 6 ~~~~g~~y~~~npk~i~~~~~~~~t~~d~G~t~d~ik~~-~f--Gi~~~dp~tG~~~~D~~l~~~i~~av~~~ek~-Ldi 81 (292) ++.+.+| -+|.++|+| |+ |-|+.+-+ .+|+|+.+.|+.|+.-+-+. .|= T Consensus 1 ~Ms~~~~-----------------------~s~~eLkdyiLRrLGAPii~Ie----Vtd~Qi~DcIdrAlely~EyHydG 53 (306) T protein:vir:10 1 MMSNNFV-----------------------RNPRELKDLILRRLGAPVIQVE----VTEDHIYDSIGRALELYKEYHHDG 53 (306) T ss_pred CCCccCC-----------------------CCHHHHHHHHHHhcCCceEEEe----cCHHHHHHHHHHHHHHHhhhhccc Confidence 2333322 155667776 33 88888866 99999999999999887552 111 Q ss_pred eecccccccccccccCcccccceeeecchhheeeeeee-------eecCCCc---------------------------- Q lcl|NC_018856. 82 VILPRYNGEHHDYYRNDFESFMFIRTRQRPVLQMEKVT-------LEYGGGT---------------------------- 126 (292) Q Consensus 82 ~IlPR~~~e~~Dyy~sd~~s~~fv~lrkkPi~~V~k~~-------l~~~g~~---------------------------- 126 (292) ... ++. .|-.-+.++.+ +++.+-...|..|.|+. ..++|.. T Consensus 54 ~~k-~y~--~~~i~ed~~~~-g~~d~~~~~v~aVtkI~r~~~g~~~tm~Gna~~~~~q~FL~~l~~~~~~~~~~g~~~~g 129 (306) T protein:vir:10 54 LNK-AYL--SVKLNQEQAAT-GYIDISAYPVFAITKIIRHKSMMWGGLGGGATLNFFTDFLTTLGGGPQGISYHGPFGAL 129 (306) T ss_pred ccc-ceE--EEEechhcccC-CeEecCCccceeeeeeeccCcceeeeccccccccchhhhhhhhcccccchhhccchhhh Confidence 100 000 00000111222 34444444455555543 1212100 Q ss_pred ------------------c-cccCccceecccccceEEEecccccccc---------ccccccccc---chhhhhhhccc Q lcl|NC_018856. 127 ------------------V-FNYPTKWWRVYKLEGQLEMLPTLMLSEQ---------GQSLNLAQV---YSGYPMIAGIP 175 (292) Q Consensus 127 ------------------~-~~~P~~w~~v~~~~G~l~~~pt~~m~~~---------~~~~~~~~~---~sg~~~~~g~~ 175 (292) | ...||-|.+ ...|++++.-+.- ++ .+-.-+... ..||....|-+ T Consensus 130 ~dL~yy~~~~sy~~~lq~ml~p~pDf~~n--~~~~ql~i~~nf~--~~D~l~~e~~~ks~~~v~~~~~~~~g~g~~~~~~ 205 (306) T protein:vir:10 130 GNIGFFAQFQSYQNMMMDQLDPLPDYWLD--PVNGVVQLTGNFR--ENDVIIMEVHIQNFVELEKSVRGVAGAGIVAGGP 205 (306) T ss_pred hhhhHHHHHHHHHHHHHHHhccccceeEc--CCcceEEEEEeec--CCcEEEEEeecccccccchhhhcccccccccCCc Confidence 1 124455522 2335555544310 10 000111111 23444333322 Q ss_pred ccCCcccC---CceEEEEEEecCCchh--hcC-CCCcccCCHHHHHHHHHHHHHHHHHHhcceeccc-ccC-cceeeecc Q lcl|NC_018856. 176 NLVGNNYA---PQMFHVEYVAGMLPPK--RRG-VSREYEMPADLWTLVIKVALKEILQQWGRLIVGA-GIA-SMSVNIDG 247 (292) Q Consensus 176 ~~~g~~~a---Pq~~~vdYvAG~~~~~--r~g-~~~~~evpadL~~~I~K~a~i~vl~~wG~liIGA-GIA-s~S~svDg 247 (292) .....++. |......|+||..|.- --+ .+-.| |..||.-=+=++||.-.+=- |+. =--|.||| T Consensus 206 ~~~~~~~~~~np~~~l~~~~~g~~~~~~~~~~~YNnrW---------vKdYaTAL~K~~wGq~L~K~qG~qLPGGVTvdG 276 (306) T protein:vir:10 206 TSADNKDKWMNPYSRMPSNVAGRARSEFPDQGVYNVRW---------VKDYATTLTKEVWGEILAKHQGMSLPGGVTVDG 276 (306) T ss_pred cccchhhhhccchhhhccccccccCCCcccccccchhH---------HHHHHHHHHHHHHHHHHHHhCCccCCCceeecH Confidence 22223333 6677778888886632 112 22223 66677777778888765321 100 00144555 Q ss_pred eEeeccchhhhhhhhhHHHHHHHHHHHHHHHHHhhhhc---ceeEe Q lcl|NC_018856. 248 ISQSIDTTQSAMYGGASADIMQLDRDIEDLVRGLKSFY---GINLG 290 (292) Q Consensus 248 iseSi~TTQSA~~~g~~ArI~ql~~dik~l~~~lk~~y---Gin~g 290 (292) .. =|.+-.+|+++|++.|...| ++-|| T Consensus 277 ~~----------------i~eeA~~E~e~LreEL~~~~~~ppi~mg 306 (306) T protein:vir:10 277 TR----------------LVEEARQEKEVLRQELLLLEEPLPILMG 306 (306) T ss_pred HH----------------HHHHHHHHHHHHHHHhhhccCCCccccC Confidence 32 25667899999999999999 69999 No 9 >protein:vir:8326 Length: 201 # NCBI annotation: gp43 # Family: family:all:3238 # MgeID: mge:154 # MgeName: Corndog # Cross-refs: genbank:acc:NP_817894;genbank:gi:29566327;genbank:GeneID:1259522 Probab=83.63 E-value=0.067 Score=27.02 Aligned_cols=193 Identities=16% Similarity=0.175 Sum_probs=109.4 Q ss_pred cccccccccCCCHHHHHHHHcCCceecCCCCcccCHHHHHHHHHHHHHHHHhHhCeeecccccccccccccCccccccee Q lcl|NC_018856. 26 IEELTLADYGFTVDAVKMNHFGIDVTDPRTKQPMPDAFYEASLEKAIAQVEKMLDIVILPRYNGEHHDYYRNDFESFMFI 105 (292) Q Consensus 26 ~~~~t~~d~G~t~d~ik~~~fGi~~~dp~tG~~~~D~~l~~~i~~av~~~ek~Ldi~IlPR~~~e~~Dyy~sd~~s~~fv 105 (292) .-+ +||.-+..+-+|.-+.| |...|..|+.|++++.|--+|-|.|-.+.+...+.-+. -..+ T Consensus 1 m~e-------L~P~dl~~~~~g~l~a~--------d~~~Q~aLdAA~aavRr~CGWHV~Pvv~dd~v~ldg~G---~~vL 62 (201) T protein:vir:83 1 MAE-------LSEADVESFTRGRLLAN--------DGETKKMLDAALLTARRYCGWKVTPVVTDDVMVLDGPD---SRIL 62 (201) T ss_pred Ccc-------ccchhcchhhcCccccC--------ChHHHHHHHHHHHHHHHHhCccceeeeeeeeEEEcCCC---CeeE Confidence 222 34555566666633332 34678999999999999999999998876655554322 2678 Q ss_pred eecchhheeeeeeeeecCCCcccccCccceecccccceEEEecccccccccccccccccchhhhhhhcccccCCcccCCc Q lcl|NC_018856. 106 RTRQRPVLQMEKVTLEYGGGTVFNYPTKWWRVYKLEGQLEMLPTLMLSEQGQSLNLAQVYSGYPMIAGIPNLVGNNYAPQ 185 (292) Q Consensus 106 ~lrkkPi~~V~k~~l~~~g~~~~~~P~~w~~v~~~~G~l~~~pt~~m~~~~~~~~~~~~~sg~~~~~g~~~~~g~~~aPq 185 (292) .|--+|+..|+.++- +|..+-..--.| + ..|+..+.+.... -.-. ..|.+ + ..+. T Consensus 63 ~LPT~rLvsV~SVte--~G~~i~~~~~~~---s-~~G~~~~~~~~~l-----l~~r---~gg~w--~-------~~~~-- 117 (201) T protein:vir:83 63 NLPTRKLVTLSELFE--RGNPVDLSKVRW---S-AGGPPGSSSRPIA-----VRKR---NGGWW--T-------GEYQ-- 117 (201) T ss_pred EcCCcccceeEEEee--CCEeccCCceee---e-cCCcccccccccc-----eeee---cCcCC--c-------Cccc-- Confidence 888888888887754 343332221122 2 2255444432210 0000 11111 1 1122 Q ss_pred eEEEEEEecCCchhhcCCCCcccCCHHHHHHHHHHHHHHHHHHhcceecccccCcce---eeecceEee-----ccchhh Q lcl|NC_018856. 186 MFHVEYVAGMLPPKRRGVSREYEMPADLWTLVIKVALKEILQQWGRLIVGAGIASMS---VNIDGISQS-----IDTTQS 257 (292) Q Consensus 186 ~~~vdYvAG~~~~~r~g~~~~~evpadL~~~I~K~a~i~vl~~wG~liIGAGIAs~S---~svDgiseS-----i~TTQS 257 (292) .+.|.|.+|| .++|++-++.|.-.|+..+-|..|.+ -+|.+ .-||++.+. .++.|| T Consensus 118 ~V~VT~tHGy-----------~~~pa~d~~~vv~~a~~~~~q~~~tG-----~~s~~l~~~~v~~v~~~w~~~~~~~~~~ 181 (201) T protein:vir:83 118 GIEVKMTHGY-----------TEDEAADWRLAVLSMVDQMSQTLASG-----RGELDLLSKKVDDVTYRWGDPYADSAQQ 181 (201) T ss_pred eEEEEEecCC-----------CCCchhHHHHHHHHHHHHHHHhhhcc-----cccccceeeeeeccchhhccccchhHHH Confidence 4899999999 56899888888888887777776643 34433 456776542 167777 Q ss_pred hhhhhhHHHHHHHHHHHHHHHHHh Q lcl|NC_018856. 258 AMYGGASADIMQLDRDIEDLVRGL 281 (292) Q Consensus 258 A~~~g~~ArI~ql~~dik~l~~~l 281 (292) |.++.++- ++|=----.+-| T Consensus 182 ~~~~~~~~----~~~~~~~~~~~~ 201 (201) T protein:vir:83 182 ALFSVTSV----FDNFTLPCVEFL 201 (201) T ss_pred HHHHHHHH----HhccccchhhcC Confidence 77665542 111000011111 No 10 >protein:vir:8430 Length: 189 # NCBI annotation: gp25 # Family: family:all:3238 # MgeID: mge:155 # MgeName: Omega # Cross-refs: genbank:acc:NP_818326;genbank:gi:29566762;genbank:GeneID:1260021 Probab=78.99 E-value=0.11 Score=25.86 Aligned_cols=183 Identities=17% Similarity=0.157 Sum_probs=98.8 Q ss_pred hcccccccccCCCHHHHHHHHcCCceecCCCCcccCHHHHHHHHHHHHHHHHhHhCeeecccccccccccccCcccccce Q lcl|NC_018856. 25 KIEELTLADYGFTVDAVKMNHFGIDVTDPRTKQPMPDAFYEASLEKAIAQVEKMLDIVILPRYNGEHHDYYRNDFESFMF 104 (292) Q Consensus 25 ~~~~~t~~d~G~t~d~ik~~~fGi~~~dp~tG~~~~D~~l~~~i~~av~~~ek~Ldi~IlPR~~~e~~Dyy~sd~~s~~f 104 (292) --+++ ||.-+.-+-+|.-+.| |-..+..|++|++++.+.-+|-|-|-.+.+. -. |-..-.. T Consensus 1 ~~~el-------~p~~~~~~~~g~l~Ad--------d~~~q~aLdAA~a~vRr~CGWHV~PV~~dtv-~v---dg~G~sv 61 (189) T protein:vir:84 1 MAEEL-------TPEDVDTYTQGRIDKD--------DPETARALAAALSRARRACGWHVTPVVESTV-RL---HGSGHDF 61 (189) T ss_pred Ccccc-------cchhcchhhcceeccC--------ChhHHHHHHHHHHHHHHhhCCcccceeeeeE-EE---cCCCCce Confidence 22334 4444455666665554 2478899999999999999999999554321 11 1112256 Q ss_pred eeecchhheeeeeeeeecCCCcccccCccceecccccceEEEecccccccccccccccccchhhhhhhcccccCCcccCC Q lcl|NC_018856. 105 IRTRQRPVLQMEKVTLEYGGGTVFNYPTKWWRVYKLEGQLEMLPTLMLSEQGQSLNLAQVYSGYPMIAGIPNLVGNNYAP 184 (292) Q Consensus 105 v~lrkkPi~~V~k~~l~~~g~~~~~~P~~w~~v~~~~G~l~~~pt~~m~~~~~~~~~~~~~sg~~~~~g~~~~~g~~~aP 184 (292) +.|--+|+..|++++ -+|..+--.-..| .+..+|.|+ . . . | .+-+ T Consensus 62 L~LPTlrlvsV~sVt--~dG~~~~~~~v~~--~~~~~Gll~---r-----------~----~------G-------w~~~ 106 (189) T protein:vir:84 62 IVLPTLKPVELLSIT--EDGEEVDLDEVYF--VSREPGVLY---K-----------K----C------G-------WWCR 106 (189) T ss_pred EecCCccceeeeeee--ecCeeccccccee--ccCCcceeE---e-----------C----C------C-------cccC Confidence 777778899999886 2233331111111 123335554 0 0 0 1 1123 Q ss_pred ceEEEEEEecCCchhhcCCCCcccCC-HHHHHHHHHHHHHHHHHHhcceecccccCcceeeecceEeeccc----hhhhh Q lcl|NC_018856. 185 QMFHVEYVAGMLPPKRRGVSREYEMP-ADLWTLVIKVALKEILQQWGRLIVGAGIASMSVNIDGISQSIDT----TQSAM 259 (292) Q Consensus 185 q~~~vdYvAG~~~~~r~g~~~~~evp-adL~~~I~K~a~i~vl~~wG~liIGAGIAs~S~svDgiseSi~T----TQSA~ 259 (292) +.+.|.|..||.| +| ||+.++|+.+|.-. -+-=|++ |+| -..|..||.+.-.-+. +-|- T Consensus 107 g~I~VT~tHGy~~-----------~pa~di~~vv~~mA~rA-~~~~~~~--~~g-~~~~~~v~dv~~r~~~~~~~~~~~- 170 (189) T protein:vir:84 107 GPIEVTLTHGFTA-----------EEAGDFREVVLQAVDVA-NLMVGTG--ATG-PITGLEVDDVNMRWSGLVDRSWGI- 170 (189) T ss_pred CeEEEEEEcCCCC-----------CCchhHHHHHHHHHHhh-hccCCCc--ccc-cccceeecceeeehhhhccccccc- Confidence 5799999999944 45 59999999998555 2222333 333 4778888877532222 1110 Q ss_pred hhhhHHHHHHHHHHHHHHHHHhhhhcceeEeeC Q lcl|NC_018856. 260 YGGASADIMQLDRDIEDLVRGLKSFYGINLGII 292 (292) Q Consensus 260 ~~g~~ArI~ql~~dik~l~~~lk~~yGin~g~i 292 (292) |+ +..|+++... | .+.+| T Consensus 171 -----~~----~~~l~~~~~~----~--~~~~~ 188 (189) T protein:vir:84 171 -----AK----NPMLESVLYQ----Y--RLVAI 188 (189) T ss_pred -----cc----chHHHHHHhh----h--hhhcc Confidence 00 1122222221 1 11111 No 11 >protein:vir:9928 Length: 118 # NCBI annotation: hypothetical protein # Family: family:all:372 # MgeID: mge:178 # MgeName: 315.6 # Cross-refs: genbank:acc:NP_795690;genbank:gi:28876458;genbank:GeneID:1258013 Probab=74.31 E-value=0.084 Score=26.49 Aligned_cols=83 Identities=16% Similarity=0.158 Sum_probs=47.3 Q ss_pred CCch-------hhcCCCCcccCCHHHHHHHHHHHHHHHHHHhcce-------------------------eccc-ccCcc Q lcl|NC_018856. 195 MLPP-------KRRGVSREYEMPADLWTLVIKVALKEILQQWGRL-------------------------IVGA-GIASM 241 (292) Q Consensus 195 ~~~~-------~r~g~~~~~evpadL~~~I~K~a~i~vl~~wG~l-------------------------iIGA-GIAs~ 241 (292) |+-- .|.|+..+.+-.-+|.+.+++-|...|+..-|.- .+|+ |++|+ T Consensus 1 md~~~~L~~vK~~lgI~~~D~~~D~lL~~~i~~a~~~i~~~l~~~~~~~~~eiP~~l~~iv~evav~ryNR~g~EG~~S~ 80 (118) T protein:vir:99 1 MGDKQLIDDIKLFIGISKGDGAQDELITLAIYESKERVLAKLNEYSETEITKIPDRLRFIVRDVAIKRFNRINSEGAVED 80 (118) T ss_pred CchhhHHHHHHHHhCCCCCchhhHHHHHHHHHHHHHHHHHHhccccccchhhhhHHHHHHHHHHHHHHhcCcCCccccee Confidence 4432 2345554444555555555555555555443320 2344 66655 Q ss_pred eeeecceEeeccchhhhhhhhhHHHHHHHHHHHHHHHHHhhhhc-ce-eEe Q lcl|NC_018856. 242 SVNIDGISQSIDTTQSAMYGGASADIMQLDRDIEDLVRGLKSFY-GI-NLG 290 (292) Q Consensus 242 S~svDgiseSi~TTQSA~~~g~~ArI~ql~~dik~l~~~lk~~y-Gi-n~g 290 (292) |.+|.|-|.+ .+..+++++|++|.+...... |. .|- T Consensus 81 --SeeG~S~sf~-----------~d~~ey~~~l~~~~~~~~~~~~g~v~Fi 118 (118) T protein:vir:99 81 --SEEGKTFKWD-----------SYLKEYESTLRSAAIGKVYSGKGVARFI 118 (118) T ss_pred --ecCCeeeeec-----------cCchhHHHHHHHHhhhcccCcCcceeeC Confidence 4668886643 257789999999987775554 62 332 No 12 >protein:vir:741 Length: 110 # NCBI annotation: unknown # Family: family:all:372 # MgeID: mge:14 # MgeName: Tuc2009 # Cross-refs: genbank:acc:NP_108718;genbank:gi:13487840;genbank:GeneID:920873 Probab=73.61 E-value=0.047 Score=27.86 Aligned_cols=81 Identities=21% Similarity=0.256 Sum_probs=46.4 Q ss_pred CCc----hhhcCCCCcccCCHHHHHHHHHHHHHHHHHHhcce---------------------eccc-ccCcceeeecce Q lcl|NC_018856. 195 MLP----PKRRGVSREYEMPADLWTLVIKVALKEILQQWGRL---------------------IVGA-GIASMSVNIDGI 248 (292) Q Consensus 195 ~~~----~~r~g~~~~~evpadL~~~I~K~a~i~vl~~wG~l---------------------iIGA-GIAs~S~svDgi 248 (292) |.- -.|.|.+. -+|.+++++.|...|+.-.|.- .+|+ |.+|+| .+|+ T Consensus 1 M~~L~~vK~~lgi~~-----D~lL~~li~~a~~~i~~~l~~~~~~iP~~l~~iv~evav~ryNR~g~EG~~S~S--eeG~ 73 (110) T protein:vir:74 1 MAITYEIKKLLGGSS-----DERLEIIEKRTRERLLLILGSDLKEVPPELEYVVLDVSLKRFNRIGQEGMQSYS--QEGL 73 (110) T ss_pred ChHHHHHHHHcCCCh-----hHHHHHHHHHHHHHHHHHhCCChhhhhHHHHHHHHHHHHHHhcccCccccceee--cCCe Confidence 322 11233321 2344444444444444443311 1344 666665 5999 Q ss_pred EeeccchhhhhhhhhHHHHHHHHHHHHHHHHHhhhhcceeEeeC Q lcl|NC_018856. 249 SQSIDTTQSAMYGGASADIMQLDRDIEDLVRGLKSFYGINLGII 292 (292) Q Consensus 249 seSi~TTQSA~~~g~~ArI~ql~~dik~l~~~lk~~yGin~g~i 292 (292) |-|.. ..+-..|+++|++|.+....+-|-.+|.. T Consensus 74 S~sf~----------~~d~~~y~~~l~~y~~~~~~~~~~~~~~~ 107 (110) T protein:vir:74 74 SMTFS----------ESDFDEYADEIESRRKSKETEGDKKIGRF 107 (110) T ss_pred eeeec----------ccchhhHHHHHHHHHhhccccccCcceee Confidence 96653 34678899999999988777777777776 No 13 >protein:vir:3615 Length: 110 # NCBI annotation: ORF38 # Family: family:all:372 # MgeID: mge:74 # MgeName: TP901-1 # Cross-refs: genbank:acc:NP_112701;genbank:gi:13786569;genbank:GeneID:921067 Probab=62.28 E-value=0.11 Score=25.81 Aligned_cols=101 Identities=20% Similarity=0.316 Sum_probs=46.3 Q ss_pred ccccccchhhhhhhcccccCCcccCCceEEEEEEecCCc-h-hh--cCCCCc-ccCCHHHHHHHHHHHHHHHHHHhccee Q lcl|NC_018856. 159 LNLAQVYSGYPMIAGIPNLVGNNYAPQMFHVEYVAGMLP-P-KR--RGVSRE-YEMPADLWTLVIKVALKEILQQWGRLI 233 (292) Q Consensus 159 ~~~~~~~sg~~~~~g~~~~~g~~~aPq~~~vdYvAG~~~-~-~r--~g~~~~-~evpadL~~~I~K~a~i~vl~~wG~li 233 (292) |.. ..-.-.+.|+.. - +=..-+.- + .| .=++++ -+||++|.-+|..+|.+.- .+ T Consensus 1 M~~---L~~vK~~lg~~~---------D---~lL~~li~~a~~~i~~~~~~~~~eiP~~l~~iv~evav~ry-NR----- 59 (110) T protein:vir:36 1 MAI---TDDLKMLLGGSL---------D---ERLEVIEKRTRDRLLLILGSDIKEVPPELEYVVLDVSLKRF-NR----- 59 (110) T ss_pred Chh---HHHHHhhcCCCh---------h---HHHHHHHHHHHHHHHHHhCCChhhhhhHHHHHHHHHHHHHh-cc----- Confidence 000 000111112110 0 00000000 0 00 001122 2455555555555444433 22 Q ss_pred ccc-ccCcceeeecceEeeccchhhhhhhhhHHHHHHHHHHHHHHHHHhhhhcceeEeeC Q lcl|NC_018856. 234 VGA-GIASMSVNIDGISQSIDTTQSAMYGGASADIMQLDRDIEDLVRGLKSFYGINLGII 292 (292) Q Consensus 234 IGA-GIAs~S~svDgiseSi~TTQSA~~~g~~ArI~ql~~dik~l~~~lk~~yGin~g~i 292 (292) +|+ |..|+ |.+|+|-|.. ..+...|.++|++|.+....+.|-.+|.. T Consensus 60 ~g~EG~~S~--SeeG~S~sf~----------~~d~~~y~~~l~~y~~~~~~~~~~~~g~~ 107 (110) T protein:vir:36 60 IGQEGMQSY--SQEGLSMTFS----------ESDFDEYADEIESWRKSRETEGDKKIGRF 107 (110) T ss_pred cccccccee--ecCCceeeec----------ccCcchHHHHHHHHHhhhccccCCcceee Confidence 343 55555 4569996554 35778999999999987777776677766 No 14 >protein:vir:9877 Length: 114 # NCBI annotation: hypothetical protein # Family: family:all:2716 # MgeID: mge:177 # MgeName: 315.5 # Cross-refs: genbank:acc:NP_795639;genbank:gi:28876402;genbank:GeneID:1257933 Probab=60.18 E-value=0.24 Score=24.01 Aligned_cols=84 Identities=14% Similarity=0.169 Sum_probs=51.1 Q ss_pred CCchh---------hcCCCCcccCCHHHHHHHHHHHHHHHHHHhccee-------------------ccc-ccCcceeee Q lcl|NC_018856. 195 MLPPK---------RRGVSREYEMPADLWTLVIKVALKEILQQWGRLI-------------------VGA-GIASMSVNI 245 (292) Q Consensus 195 ~~~~~---------r~g~~~~~evpadL~~~I~K~a~i~vl~~wG~li-------------------IGA-GIAs~S~sv 245 (292) |+-.+ |.|++ .+.+-+|.++|++-|..+|+--.|.-- +|+ |++|+| . T Consensus 1 m~~~~~~~L~~vK~~Lgi~--d~~~D~lL~~ii~~~~~~i~~~l~~~~iP~~L~~Iv~ev~vkryNR~g~EG~~S~S--~ 76 (114) T protein:vir:98 1 MDETKQAIIDRVRVRLADE--TSLKEELLEELTQTAIDRINLKVGDVVFNPLFNSIAVDVVVKMYRRMYFEGIDTEK--A 76 (114) T ss_pred CchhHHHHHHHHHHHhCCC--CCchhhHHHHHHHHHHHHHHHhhCccccchHHHHHHHHHHHHHhcccCccccceee--c Confidence 65543 34552 334566777777776666665544321 222 667764 5 Q ss_pred cceEeeccchhhhhhhhhHHHHHHHHHHHHHHHHHhhhhc-ceeEeeC Q lcl|NC_018856. 246 DGISQSIDTTQSAMYGGASADIMQLDRDIEDLVRGLKSFY-GINLGII 292 (292) Q Consensus 246 DgiseSi~TTQSA~~~g~~ArI~ql~~dik~l~~~lk~~y-Gin~g~i 292 (292) +|.|-|.+ .-+...|.++|++|.+..+..- |-.+=+| T Consensus 77 eG~S~tf~----------dndf~ey~~~l~~y~~~~~~~~~g~~v~Fl 114 (114) T protein:vir:98 77 DTISTKFI----------ENVLAEYGEELASYKKDRLAILNKKVVRFL 114 (114) T ss_pred cceeeeee----------ccccchhHHHHHHHHhhhhhhhcCceeecC Confidence 88884443 3467889999999998776664 6334444 No 15 >protein:vir:3970 Length: 110 # NCBI annotation: hypothetical protein # Family: family:all:372 # MgeID: mge:83 # MgeName: ul36 # Cross-refs: genbank:acc:NP_663678;genbank:gi:21716115;genbank:GeneID:951203 Probab=60.12 E-value=0.14 Score=25.33 Aligned_cols=101 Identities=21% Similarity=0.301 Sum_probs=46.4 Q ss_pred ccccccchhhhhhhcccccCCcccCCceEEEEEEecCCch--hh--cCCCCc-ccCCHHHHHHHHHHHHHHHHHHhccee Q lcl|NC_018856. 159 LNLAQVYSGYPMIAGIPNLVGNNYAPQMFHVEYVAGMLPP--KR--RGVSRE-YEMPADLWTLVIKVALKEILQQWGRLI 233 (292) Q Consensus 159 ~~~~~~~sg~~~~~g~~~~~g~~~aPq~~~vdYvAG~~~~--~r--~g~~~~-~evpadL~~~I~K~a~i~vl~~wG~li 233 (292) |.. ..-.-.+.|++. - +=..-+.-. .| .=++++ -++|++|.-+|..+|.+.-= + T Consensus 1 M~i---L~~vK~~lgi~~---------D---~lL~~li~~a~~~i~~~l~~~~~~iP~~l~~iv~evav~ryN-R----- 59 (110) T protein:vir:39 1 MAI---TDDLKKLLGGSS---------D---ERLEVIEKRTRERLLLILSSNIKEVPPELEYVVLDVSLKRFN-R----- 59 (110) T ss_pred Cch---HHHHHHhcCCCh---------h---HHHHHHHHHHHHHHHHHhCCChhhhhhHHHHHHHHHHHHHhc-c----- Confidence 100 011111122110 0 000000000 00 001111 23555555555555544432 1 Q ss_pred ccc-ccCcceeeecceEeeccchhhhhhhhhHHHHHHHHHHHHHHHHHhhhhcceeEeeC Q lcl|NC_018856. 234 VGA-GIASMSVNIDGISQSIDTTQSAMYGGASADIMQLDRDIEDLVRGLKSFYGINLGII 292 (292) Q Consensus 234 IGA-GIAs~S~svDgiseSi~TTQSA~~~g~~ArI~ql~~dik~l~~~lk~~yGin~g~i 292 (292) +|+ |..|+| .+|+|-|.. ..+...|.++|++|.+....+.+-.+|-. T Consensus 60 ~g~EG~~S~S--eeG~S~sf~----------~~d~~~y~~~l~~y~~~~~~~~~~~~g~~ 107 (110) T protein:vir:39 60 IGQEGMQSYS--QEGLSMTFS----------ESDFDEYADEIESWRKSKETEGDKKIGRF 107 (110) T ss_pred ccccccceee--cCCeeeeec----------ccCcchhHHHHHHHhhhccccccCcceee Confidence 344 656654 679996643 35788999999999988766665666666 No 16 >protein:vir:80144 Length: 91 # NCBI annotation: hypothetical protein # Family: family:all:3227 # MgeID: mge:1877 # MgeName: bacteriophage bv1 # Cross-refs: genbank:acc:YP_001425605;genbank:gi:155042938;genbank:GeneID:5469573 Probab=46.78 E-value=0.092 Score=26.26 Aligned_cols=84 Identities=15% Similarity=0.207 Sum_probs=45.2 Q ss_pred CCHHHHHH---HHcCCceecCCCCcccCHHHHHHHHHHHHHHHHhHhCeeecccccccc---cccccCccccc-ceeeec Q lcl|NC_018856. 36 FTVDAVKM---NHFGIDVTDPRTKQPMPDAFYEASLEKAIAQVEKMLDIVILPRYNGEH---HDYYRNDFESF-MFIRTR 108 (292) Q Consensus 36 ~t~d~ik~---~~fGi~~~dp~tG~~~~D~~l~~~i~~av~~~ek~Ldi~IlPR~~~e~---~Dyy~sd~~s~-~fv~lr 108 (292) .+.|+|=+ .-.|+.. .+-|.+|++.|++++.++|.+.+|+.-|...+.. -||-.-.|++- .=+.+- T Consensus 1 md~~~il~LlK~~LGIst-------~~RD~yL~~iI~~v~~ELed~kGi~L~~~~~~h~mf~vDyAawRY~~r~~~~~mP 73 (91) T protein:vir:80 1 MDTATVVALVKERLGIRT-------TVRDTYITAIVDGVIKELEDEKGLVLDGANPYHLMFVVDYATWRYQSRDSDGAMP 73 (91) T ss_pred CchHHHHHHHHHHhcccc-------hhhhHHHHHHHHHHHHHHHhcCCceecCCChhHhhHHhhHhHhhhccCCCcccch Confidence 33333333 1235532 3679999999999999999999999988654421 35522222220 000011 Q ss_pred chhheeeeeeeeecCCCc Q lcl|NC_018856. 109 QRPVLQMEKVTLEYGGGT 126 (292) Q Consensus 109 kkPi~~V~k~~l~~~g~~ 126 (292) +-==.|++++...++|.+ T Consensus 74 rhLqyRL~NliIk~rg~~ 91 (91) T protein:vir:80 74 RHLQYRLHNLMIHVGGSP 91 (91) T ss_pred HHHHHHHHhhhhcccCCC Confidence 111124455555555555 No 17 >protein:vir:95774 Length: 115 # NCBI annotation: hypothetical protein # Family: family:all:372 # MgeID: mge:1578 # MgeName: SMP # Cross-refs: genbank:acc:YP_950592;genbank:gi:119953787;genbank:GeneID:5076844 Probab=45.69 E-value=0.63 Score=21.70 Aligned_cols=86 Identities=16% Similarity=0.102 Sum_probs=42.4 Q ss_pred CCc------hhhcCCCCcccCCHHHHHHHHHHHHHHHHHHhcce-------------------eccc-ccCcceeeecce Q lcl|NC_018856. 195 MLP------PKRRGVSREYEMPADLWTLVIKVALKEILQQWGRL-------------------IVGA-GIASMSVNIDGI 248 (292) Q Consensus 195 ~~~------~~r~g~~~~~evpadL~~~I~K~a~i~vl~~wG~l-------------------iIGA-GIAs~S~svDgi 248 (292) |+- --|.|+..+.+..-+|.+.|++-|...|+.-.|.- .+|+ |++|+|. +|. T Consensus 1 md~~~L~~vK~~LgI~~~D~~~D~lL~~ii~~a~~~i~~~l~~~~iP~~L~~Iv~ev~vkryNR~g~EG~~S~S~--eG~ 78 (115) T protein:vir:95 1 MDTTQLEKIKRRLGIPADDDKEDKLLEDLVEDAETYFKLLTSSAVVDSKYHFMIEAVVYKLYGRKGSEGVTSETV--DGY 78 (115) T ss_pred CchhHHHHHHHHhCCCCCCchhhHHHHHHHHHHHHHHHHhcCchhcchhHHHHHHHHHHHHhcCCCccccceeec--Cce Confidence 433 12234433333344444444444444444333321 1354 7777665 888 Q ss_pred EeeccchhhhhhhhhHHHHHHHHHHHHHHHHHhhhhc--c-eeEeeC Q lcl|NC_018856. 249 SQSIDTTQSAMYGGASADIMQLDRDIEDLVRGLKSFY--G-INLGII 292 (292) Q Consensus 249 seSi~TTQSA~~~g~~ArI~ql~~dik~l~~~lk~~y--G-in~g~i 292 (292) |=|..+.= .+..+|.++|++|.+..+..- | +.| | T Consensus 79 S~tf~~nD--------~~f~eY~~~l~~~~~~~~~~~~~G~v~F--l 115 (115) T protein:vir:95 79 SVTYQEWD--------NLFKPYMAILNKDFGLDGSVREKGKVMF--L 115 (115) T ss_pred eeeccccc--------cccchhHHHHHHHHhccCCccCCcceee--C Confidence 84442221 226778999999987554432 3 332 2 No 18 >protein:vir:101857 Length: 307 # NCBI annotation: gp13 neck protein # Family: family:all:1103 # MgeID: mge:1580 # MgeName: 31 # Cross-refs: genbank:acc:YP_238876;genbank:gi:66391951;genbank:GeneID:3416684 Probab=43.10 E-value=0.86 Score=20.95 Aligned_cols=229 Identities=16% Similarity=0.142 Sum_probs=104.9 Q ss_pred CCCCCcCCCCCccccCCCCCCChhhcccccccccCCCHHHHHHH-Hc--CCceecCCCCcccCHHHHHHHHHHHHHHHHh Q lcl|NC_018856. 1 MYNNPMHQDGTQYQHNNEKLIDLDKIEELTLADYGFTVDAVKMN-HF--GIDVTDPRTKQPMPDAFYEASLEKAIAQVEK 77 (292) Q Consensus 1 ~~~~p~~~~g~~y~~~npk~i~~~~~~~~t~~d~G~t~d~ik~~-~f--Gi~~~dp~tG~~~~D~~l~~~i~~av~~~ek 77 (292) |..+ | -+|.++|+| |+ |-|+++=+ .+|+|+.+.|+.|+.-+-+ T Consensus 1 m~~~-------------~-----------------~s~~eLkdyiLRrLGAPii~In----Vtd~Qi~DcId~Alely~E 46 (307) T protein:vir:10 1 MSYT-------------C-----------------NNPLELKDAILRRLGAPIVHVE----VTEEQVFDCISRALELYGE 46 (307) T ss_pred CCCC-------------C-----------------CCHHHHHHHHHHhcCCceEEEE----cCHHHHHHHHHHHHHHhhh Confidence 2222 1 145667776 43 98988866 9999999999999988754 Q ss_pred Hh-CeeecccccccccccccCcccccceeeecchhheeeeeee-------eecCCCcccccCccceecccccceEEEecc Q lcl|NC_018856. 78 ML-DIVILPRYNGEHHDYYRNDFESFMFIRTRQRPVLQMEKVT-------LEYGGGTVFNYPTKWWRVYKLEGQLEMLPT 149 (292) Q Consensus 78 ~L-di~IlPR~~~e~~Dyy~sd~~s~~fv~lrkkPi~~V~k~~-------l~~~g~~~~~~P~~w~~v~~~~G~l~~~pt 149 (292) .- |=. ..++. .|-.-+-++++ ++..+...+|..|.++. +.+.|..++.+=++- +-|..- ++ T Consensus 47 yHydG~-~k~y~--~~~ite~~~~~-g~~d~~d~~v~avt~iirt~~~~~~t~dG~a~y~w~~d~-----~~g~~g--~~ 115 (307) T protein:vir:10 47 YHYDGF-HRTYA--TVVLTEQQAKT-GIIDMKGGNVFAVTQVLRTNVGSIITMDGTAVYPWFTDF-----VMGMTG--AS 115 (307) T ss_pred hccccc-ccceE--EEEechhhccC-CEEecCCcchhhhhhhhhhccccccccCccccccccccc-----ceeecC--Cc Confidence 21 100 00000 00011223333 56666666777777764 444555555433322 111110 00 Q ss_pred cccccccccccccccchhh-------h-hhhcccc---------------cCCcccCCceEE-----------EEEEecC Q lcl|NC_018856. 150 LMLSEQGQSLNLAQVYSGY-------P-MIAGIPN---------------LVGNNYAPQMFH-----------VEYVAGM 195 (292) Q Consensus 150 ~~m~~~~~~~~~~~~~sg~-------~-~~~g~~~---------------~~g~~~aPq~~~-----------vdYvAG~ 195 (292) .+-+......+...+..|| . ++..+-+ +.|..-.+..+. .+++.|. T Consensus 116 ~~~~~~~~~~n~~g~~l~y~t~l~sy~~~m~d~~~pl~d~~yn~~t~~l~i~~nf~~~d~i~~e~~~k~yle~~~~v~~~ 195 (307) T protein:vir:10 116 IGGQCKWYGPNAFGGDLGYFTQLMSYRSMMGDLLSPLPDFYYNSSSEMMKIAGQFKAGDLIVFEVYCKSYANVDTMLAGT 195 (307) T ss_pred cceeeeeecccccccchhhhhHHHHHHHHHHhhcccccceeecCCceeEEEeeeccCCceEEEEEEeccccchhhhhhcc Confidence 0000000011111111121 1 1111100 001111122221 1222232 Q ss_pred Cchhh---cCCCCcccC------------------CHH-H------HHHHHHHHHHHHHHHhcceeccc-ccC-cceeee Q lcl|NC_018856. 196 LPPKR---RGVSREYEM------------------PAD-L------WTLVIKVALKEILQQWGRLIVGA-GIA-SMSVNI 245 (292) Q Consensus 196 ~~~~r---~g~~~~~ev------------------pad-L------~~~I~K~a~i~vl~~wG~liIGA-GIA-s~S~sv 245 (292) .-..| ++-.-+|+. |.+ . -.-|.+||.-=+=++||.-.+=- |+. =--+.+ T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~t~~~~YNn~WvKdYaTAL~K~~wGq~L~K~qG~qLPGGvTl 275 (307) T protein:vir:10 196 SAGYGFAMSCDGDEPSQSQLYGNPNLAGGAIYAGGSNGMLKDGAYNNRWVKDMSTAYVKELNGQVLAKHQGMQLPGGITI 275 (307) T ss_pred cccceEeeccccCCccchhhcCCchhhcccccccCccccccccccchhHHHHHHHHHHHHHHHHHHHHhCCccCCCceee Confidence 22222 111112222 111 1 12467788877888898765321 110 001455 Q ss_pred cceEeeccchhhhhhhhhHHHHHHHHHHHHHHHHHhhhhc---ceeEe Q lcl|NC_018856. 246 DGISQSIDTTQSAMYGGASADIMQLDRDIEDLVRGLKSFY---GINLG 290 (292) Q Consensus 246 DgiseSi~TTQSA~~~g~~ArI~ql~~dik~l~~~lk~~y---Gin~g 290 (292) ||.. =|.+-.+|+++|++.|.+.| ++-|| T Consensus 276 dG~~----------------i~eeA~~E~e~LreeL~~~~~~ppi~mg 307 (307) T protein:vir:10 276 DGVR----------------LIEEARIDIDKLRNELELLDAPPPIIMG 307 (307) T ss_pred cHHH----------------HHHHHHHHHHHHHHHHhhcCCCCccccC Confidence 5532 15667899999999999999 79999 No 19 >protein:vir:101153 Length: 307 # NCBI annotation: neck protein # Family: family:all:1103 # MgeID: mge:1582 # MgeName: 44RR2.8t # Cross-refs: genbank:acc:NP_932504;genbank:gi:37651630;genbank:GeneID:2610646 Probab=43.10 E-value=0.86 Score=20.95 Aligned_cols=229 Identities=16% Similarity=0.142 Sum_probs=104.9 Q ss_pred CCCCCcCCCCCccccCCCCCCChhhcccccccccCCCHHHHHHH-Hc--CCceecCCCCcccCHHHHHHHHHHHHHHHHh Q lcl|NC_018856. 1 MYNNPMHQDGTQYQHNNEKLIDLDKIEELTLADYGFTVDAVKMN-HF--GIDVTDPRTKQPMPDAFYEASLEKAIAQVEK 77 (292) Q Consensus 1 ~~~~p~~~~g~~y~~~npk~i~~~~~~~~t~~d~G~t~d~ik~~-~f--Gi~~~dp~tG~~~~D~~l~~~i~~av~~~ek 77 (292) |..+ | -+|.++|+| |+ |-|+++=+ .+|+|+.+.|+.|+.-+-+ T Consensus 1 m~~~-------------~-----------------~s~~eLkdyiLRrLGAPii~In----Vtd~Qi~DcId~Alely~E 46 (307) T protein:vir:10 1 MSYT-------------C-----------------NNPLELKDAILRRLGAPIVHVE----VTEEQVFDCISRALELYGE 46 (307) T ss_pred CCCC-------------C-----------------CCHHHHHHHHHHhcCCceEEEE----cCHHHHHHHHHHHHHHhhh Confidence 2222 1 145667776 43 98988866 9999999999999988754 Q ss_pred Hh-CeeecccccccccccccCcccccceeeecchhheeeeeee-------eecCCCcccccCccceecccccceEEEecc Q lcl|NC_018856. 78 ML-DIVILPRYNGEHHDYYRNDFESFMFIRTRQRPVLQMEKVT-------LEYGGGTVFNYPTKWWRVYKLEGQLEMLPT 149 (292) Q Consensus 78 ~L-di~IlPR~~~e~~Dyy~sd~~s~~fv~lrkkPi~~V~k~~-------l~~~g~~~~~~P~~w~~v~~~~G~l~~~pt 149 (292) .- |=. ..++. .|-.-+-++++ ++..+...+|..|.++. +.+.|..++.+=++- +-|..- ++ T Consensus 47 yHydG~-~k~y~--~~~ite~~~~~-g~~d~~d~~v~avt~iirt~~~~~~t~dG~a~y~w~~d~-----~~g~~g--~~ 115 (307) T protein:vir:10 47 YHYDGF-HRTYA--TVVLTEQQAKT-GIIDMKGGNVFAVTQVLRTNVGSIITMDGTAVYPWFTDF-----VMGMTG--AS 115 (307) T ss_pred hccccc-ccceE--EEEechhhccC-CEEecCCcchhhhhhhhhhccccccccCccccccccccc-----ceeecC--Cc Confidence 21 100 00000 00011223333 56666666777777764 444555555433322 111110 00 Q ss_pred cccccccccccccccchhh-------h-hhhcccc---------------cCCcccCCceEE-----------EEEEecC Q lcl|NC_018856. 150 LMLSEQGQSLNLAQVYSGY-------P-MIAGIPN---------------LVGNNYAPQMFH-----------VEYVAGM 195 (292) Q Consensus 150 ~~m~~~~~~~~~~~~~sg~-------~-~~~g~~~---------------~~g~~~aPq~~~-----------vdYvAG~ 195 (292) .+-+......+...+..|| . ++..+-+ +.|..-.+..+. .+++.|. T Consensus 116 ~~~~~~~~~~n~~g~~l~y~t~l~sy~~~m~d~~~pl~d~~yn~~t~~l~i~~nf~~~d~i~~e~~~k~yle~~~~v~~~ 195 (307) T protein:vir:10 116 IGGQCKWYGPNAFGGDLGYFTQLMSYRSMMGDLLSPLPDFYYNSSSEMMKIAGQFKAGDLIVFEVYCKSYANVDTMLAGT 195 (307) T ss_pred cceeeeeecccccccchhhhhHHHHHHHHHHhhcccccceeecCCceeEEEeeeccCCceEEEEEEeccccchhhhhhcc Confidence 0000000011111111121 1 1111100 001111122221 1222232 Q ss_pred Cchhh---cCCCCcccC------------------CHH-H------HHHHHHHHHHHHHHHhcceeccc-ccC-cceeee Q lcl|NC_018856. 196 LPPKR---RGVSREYEM------------------PAD-L------WTLVIKVALKEILQQWGRLIVGA-GIA-SMSVNI 245 (292) Q Consensus 196 ~~~~r---~g~~~~~ev------------------pad-L------~~~I~K~a~i~vl~~wG~liIGA-GIA-s~S~sv 245 (292) .-..| ++-.-+|+. |.+ . -.-|.+||.-=+=++||.-.+=- |+. =--+.+ T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~t~~~~YNn~WvKdYaTAL~K~~wGq~L~K~qG~qLPGGvTl 275 (307) T protein:vir:10 196 SAGYGFAMSCDGDEPSQSQLYGNPNLAGGAIYAGGSNGMLKDGAYNNRWVKDMSTAYVKELNGQVLAKHQGMQLPGGITI 275 (307) T ss_pred cccceEeeccccCCccchhhcCCchhhcccccccCccccccccccchhHHHHHHHHHHHHHHHHHHHHhCCccCCCceee Confidence 22222 111112222 111 1 12467788877888898765321 110 001455 Q ss_pred cceEeeccchhhhhhhhhHHHHHHHHHHHHHHHHHhhhhc---ceeEe Q lcl|NC_018856. 246 DGISQSIDTTQSAMYGGASADIMQLDRDIEDLVRGLKSFY---GINLG 290 (292) Q Consensus 246 DgiseSi~TTQSA~~~g~~ArI~ql~~dik~l~~~lk~~y---Gin~g 290 (292) ||.. =|.+-.+|+++|++.|.+.| ++-|| T Consensus 276 dG~~----------------i~eeA~~E~e~LreeL~~~~~~ppi~mg 307 (307) T protein:vir:10 276 DGVR----------------LIEEARIDIDKLRNELELLDAPPPIIMG 307 (307) T ss_pred cHHH----------------HHHHHHHHHHHHHHHHhhcCCCCccccC Confidence 5532 15667899999999999999 79999 No 20 >protein:vir:99517 Length: 124 # NCBI annotation: putative protein # Family: family:all:372 # MgeID: mge:1559 # MgeName: Lj928 # Cross-refs: genbank:acc:NP_958539;genbank:gi:41179321;genbank:GeneID:2717155 Probab=36.16 E-value=0.98 Score=20.62 Aligned_cols=88 Identities=19% Similarity=0.187 Sum_probs=43.9 Q ss_pred cccccc--chhhhhhhcccccCCcccCCceEEEEEEecCCchhhcCCCCcccCCHHHHHHHHHHHHHHHHHHhcce--e- Q lcl|NC_018856. 159 LNLAQV--YSGYPMIAGIPNLVGNNYAPQMFHVEYVAGMLPPKRRGVSREYEMPADLWTLVIKVALKEILQQWGRL--I- 233 (292) Q Consensus 159 ~~~~~~--~sg~~~~~g~~~~~g~~~aPq~~~vdYvAG~~~~~r~g~~~~~evpadL~~~I~K~a~i~vl~~wG~l--i- 233 (292) |+-+.+ ..-. --|.|++ .+.+-+|.+.+++-|...|+.-.|.- | T Consensus 1 m~~~~~~~Le~v-----------------------------K~~LgI~--d~~~D~lL~~lI~~a~~~i~~~l~~~e~iP 49 (124) T protein:vir:99 1 MNDVLDDQLKKL-----------------------------KTALQLT--DTKHDDLLKLYLEDATDFLKLRLSITGVIP 49 (124) T ss_pred CCcchHHHHHHH-----------------------------HHHhCCC--CcchhHHHHHHHHHHHHHHHHhcCCcccch Confidence 111100 0011 1123432 22344555555555555555555531 2 Q ss_pred -----------------ccc-ccCcceeeecceEeeccchhhhhhhhhHHHHHHHHHHHHHHHHHhhhhcceeEe-eC Q lcl|NC_018856. 234 -----------------VGA-GIASMSVNIDGISQSIDTTQSAMYGGASADIMQLDRDIEDLVRGLKSFYGINLG-II 292 (292) Q Consensus 234 -----------------IGA-GIAs~S~svDgiseSi~TTQSA~~~g~~ArI~ql~~dik~l~~~lk~~yGin~g-~i 292 (292) +|+ |..|+| .+|.|-|.. ..+...|+++|.+|.+...++ | -| +| T Consensus 50 ~~L~~Iv~evavkryNR~g~EG~~S~S--eeG~S~sf~----------d~d~~~y~~~L~~y~~~~~~~-g--~~~fi 112 (124) T protein:vir:99 50 TEMLAIVRGAAVKKFNRFKNEGMASYS--QDGESITFA----------SSDFDEWEDEINQWRKDHTGM-N--KGMWV 112 (124) T ss_pred hHHHHHHHHHHHHHhcccCCcccceee--eCceeeeec----------ccChhhHHHHHHHHhhccCcC-C--ceeee Confidence 232 666665 589986654 346788999999998876432 2 12 22 No 21 >protein:vir:94507 Length: 113 # NCBI annotation: putative DNA packaging protein # Family: family:all:372 # MgeID: mge:1510 # MgeName: phiJL-1 # Cross-refs: genbank:acc:YP_223891;genbank:gi:62327103;genbank:GeneID:5075523 Probab=35.23 E-value=0.96 Score=20.69 Aligned_cols=83 Identities=24% Similarity=0.285 Sum_probs=46.0 Q ss_pred CCc----hhhcCCCCcccCCHHHHHHHHHHHHHHHHHHhcce------e------------------ccc-ccCcceeee Q lcl|NC_018856. 195 MLP----PKRRGVSREYEMPADLWTLVIKVALKEILQQWGRL------I------------------VGA-GIASMSVNI 245 (292) Q Consensus 195 ~~~----~~r~g~~~~~evpadL~~~I~K~a~i~vl~~wG~l------i------------------IGA-GIAs~S~sv 245 (292) |.- --|.|++ .+.+-+|.++|++-|...|+...|.- | +|+ |.+|+| . T Consensus 1 M~~L~~vK~~lgi~--d~~~D~lL~~iI~~a~~~i~~~l~~~~~~~~~iP~~l~~Iv~evavkryNR~g~EG~~S~S--e 76 (113) T protein:vir:94 1 MALLDSIKLRIGIE--DTKQDDLLTDIISDVQARVLAYVNQDGLVQSELPNGLDFVIKDVTIRIYNKIGDEGKESSS--E 76 (113) T ss_pred CchHHHHHHHhCCC--CCchhhHHHHHHHHHHHHHHHHhCCccchhhhhhhHHHHHHHHHHHHHhcccCCccceeee--c Confidence 322 1124442 23345566666666666666555531 1 344 666665 5 Q ss_pred cceEeeccchhhhhhhhhHHHHHHHHHHHHHHHHHhhhhc-ceeEeeC Q lcl|NC_018856. 246 DGISQSIDTTQSAMYGGASADIMQLDRDIEDLVRGLKSFY-GINLGII 292 (292) Q Consensus 246 DgiseSi~TTQSA~~~g~~ArI~ql~~dik~l~~~lk~~y-Gin~g~i 292 (292) +|.|=|.+. .-+..+|+++|++|.+.....= |+.| | T Consensus 77 eG~S~sf~~---------~~df~~y~~~l~~~~~~~~~~~~g~rF--~ 113 (113) T protein:vir:94 77 GNVSNTWDT---------PADLSEYSDVLDVYRKSYKRRSAGMRF--I 113 (113) T ss_pred CceeeeecC---------ccchhhHHHHHHHHHhhccCCCCCcee--C Confidence 588833221 1357889999999999864443 6543 3 No 22 >protein:vir:95374 Length: 93 # NCBI annotation: hypothetical protein # Family: family:all:3227 # MgeID: mge:1567 # MgeName: GBSV1 # Cross-refs: genbank:acc:YP_764478;genbank:gi:115334632;genbank:GeneID:5179261 Probab=31.79 E-value=0.25 Score=23.92 Aligned_cols=89 Identities=20% Similarity=0.266 Sum_probs=48.1 Q ss_pred CCChhhcccccccccCCCHHHHHHHHcCCceecCCCCcccCHHHHHHHHHHHHHHHHhHhCeeecccccccc---ccccc Q lcl|NC_018856. 20 LIDLDKIEELTLADYGFTVDAVKMNHFGIDVTDPRTKQPMPDAFYEASLEKAIAQVEKMLDIVILPRYNGEH---HDYYR 96 (292) Q Consensus 20 ~i~~~~~~~~t~~d~G~t~d~ik~~~fGi~~~dp~tG~~~~D~~l~~~i~~av~~~ek~Ldi~IlPR~~~e~---~Dyy~ 96 (292) ..|.+.+-++--.+. |+. +.+-|.+|++.|++++.++|.+.+|+.-|...+.. -||=. T Consensus 1 ~md~~~il~LlK~~L------------GIs-------t~~RD~yL~~iI~~v~~ELed~kGi~L~~~~~~h~mf~vDyAa 61 (93) T protein:vir:95 1 MMDIATIVSLVKERL------------GIR-------TTVRDTYITAIVDGVIKELEDEKGLVLDGANPYHLMFVVDYAT 61 (93) T ss_pred CccHHHHHHHHHHHh------------ccc-------chhhhHHHHHHHHHHHHHHHhcCCceecCCChhHhhHHHhHhH Confidence 334444433333333 432 23679999999999999999999999988654421 35422 Q ss_pred Cccccc-ceeeecchhheeeeeeeeecCCCcc Q lcl|NC_018856. 97 NDFESF-MFIRTRQRPVLQMEKVTLEYGGGTV 127 (292) Q Consensus 97 sd~~s~-~fv~lrkkPi~~V~k~~l~~~g~~~ 127 (292) -.|++- .=+.+-+-==.|++++.+..+|..- T Consensus 62 wRY~~r~~~~~mPrhLqyRL~Nliikar~~~a 93 (93) T protein:vir:95 62 WRYQSRDSDGAMPRHLQYRLHNLMLHAGGGTA 93 (93) T ss_pred hhhccCCCcccchHHHHHHHHHhhhhcccccC Confidence 222220 0011111111345555566665444 No 23 >protein:vir:964 Length: 93 # NCBI annotation: Orf46 # Family: family:all:3227 # MgeID: mge:19 # MgeName: bIL285 # Cross-refs: genbank:acc:NP_076618;genbank:gi:13095726;genbank:GeneID:920285 Probab=25.64 E-value=0.25 Score=23.90 Aligned_cols=86 Identities=20% Similarity=0.310 Sum_probs=43.1 Q ss_pred CChhhcccccccccCCCHHHHHHHHcCCceecCCCCcccCHHHHHHHHHHHHHHHHhHhCeeecccccccc---cccccC Q lcl|NC_018856. 21 IDLDKIEELTLADYGFTVDAVKMNHFGIDVTDPRTKQPMPDAFYEASLEKAIAQVEKMLDIVILPRYNGEH---HDYYRN 97 (292) Q Consensus 21 i~~~~~~~~t~~d~G~t~d~ik~~~fGi~~~dp~tG~~~~D~~l~~~i~~av~~~ek~Ldi~IlPR~~~e~---~Dyy~s 97 (292) .|.+.+-++--.+. |+. +.+-|.+|++.|++++.++|.+.+|+.-|...+.. -||-.- T Consensus 1 md~~~il~LlK~~L------------GIs-------t~~RD~yL~~iI~~v~~ELed~kGi~L~~~~~~h~mf~vDyAaw 61 (93) T protein:vir:96 1 MDEDSILNLVKAVL------------GYR-------SAVRDELLKVIIKSVITELKDNKGIVLEPKSDEQVMFIVDLAAF 61 (93) T ss_pred CchHHHHHHHHHHh------------ccc-------chhhhHHHHHHHHHHHHHHHhhcCceecCCChhHHHHHHHHhHh Confidence 33333333333333 443 23679999999999999999999999988654321 344222 Q ss_pred ccc----ccceeeecchhheeeeeeeeecCCCcccccCccceecccccc Q lcl|NC_018856. 98 DFE----SFMFIRTRQRPVLQMEKVTLEYGGGTVFNYPTKWWRVYKLEG 142 (292) Q Consensus 98 d~~----s~~fv~lrkkPi~~V~k~~l~~~g~~~~~~P~~w~~v~~~~G 142 (292) .|. .-|==||..| ++.+....+|..=. | T Consensus 62 RYk~~~~~~mPrhLqyR----l~nlii~~r~k~~v-------------g 93 (93) T protein:vir:96 62 RYKHQGGETMPRNLEYR----LRNLIIKYRGKNDV-------------G 93 (93) T ss_pred hhccCCCcchhHHHHHH----HHHHHHhhcccccC-------------C Confidence 221 1122233332 22222222211111 1 No 24 >protein:vir:100885 Length: 110 # NCBI annotation: putative DNA packaging protein # Family: family:all:6491 # MgeID: mge:1473 # MgeName: Lc-Nu # Cross-refs: genbank:acc:YP_358765;genbank:gi:78000029;genbank:GeneID:3726156 Probab=23.29 E-value=0.8 Score=21.10 Aligned_cols=92 Identities=14% Similarity=0.168 Sum_probs=49.6 Q ss_pred ccccccCCCHHHHHHHHcCCceecCCCCcccCHHHHHHHHHHHHHHHHhHhCeee-------cccccc-----ccccccc Q lcl|NC_018856. 29 LTLADYGFTVDAVKMNHFGIDVTDPRTKQPMPDAFYEASLEKAIAQVEKMLDIVI-------LPRYNG-----EHHDYYR 96 (292) Q Consensus 29 ~t~~d~G~t~d~ik~~~fGi~~~dp~tG~~~~D~~l~~~i~~av~~~ek~Ldi~I-------lPR~~~-----e~~Dyy~ 96 (292) +|-.+ |.|+|.||.+|. .|. ..+|.+|+.+|..|-..+-...|-.| .||..- --|.|++ T Consensus 1 ~~~s~-gVT~ddiK~~Lr----iD~----~~DD~~L~~li~tAe~yI~~AI~~ti~~~~~~~~p~Fn~AV~lLvd~wY~n 71 (110) T protein:vir:10 1 MTDGQ-GVTPEDMQQYLN----LDT----NGDASVLADMISTAEEAITGAIDDTIDVGIYRKYPLFNQAVRVLVDFMYYS 71 (110) T ss_pred CCCCc-cccHHHHHHHhc----CCC----CchhHHHHHHHHHHHHHHhhccCCCcchhhhhhchhhhHHHHHHHHHhhhc Confidence 44433 899999999985 342 36899999999999988877766555 455421 1256666 Q ss_pred Ccccccceeeecch-h-----heeeeeeeeecCCCcccccCccceecccccceEEEeccccccccccc Q lcl|NC_018856. 97 NDFESFMFIRTRQR-P-----VLQMEKVTLEYGGGTVFNYPTKWWRVYKLEGQLEMLPTLMLSEQGQS 158 (292) Q Consensus 97 sd~~s~~fv~lrkk-P-----i~~V~k~~l~~~g~~~~~~P~~w~~v~~~~G~l~~~pt~~m~~~~~~ 158 (292) +--.+ -.+ ++ | +++=.+|+++-+... + . ++..+ T Consensus 72 Rga~s---~~~-~~~P~sv~smIqQlR~~~~~~~~~-------------~-----------~-~~~~~ 110 (110) T protein:vir:10 72 RGTLS---DQS-KAYPPSYAYMINSIRWKIQRDQAA-------------K-----------A-GGTDG 110 (110) T ss_pred ccccc---hhh-cccchHHHHHHHHHHhhhhhhhhh-------------c-----------c-CCCCC Confidence 63222 111 22 2 222233555433000 0 0 00000 Done!