Query lcl|NC_018848.1_cdsid_YP_006906952.1 [gene=SV1_10] [protein=hypothetical protein] [protein_id=YP_006906952.1] [location=7724..8044] Match_columns 106 No_of_seqs 11 out of 14 Neff 3.0 Searched_HMMs 1612 Date Thu Nov 7 13:03:48 2013 Command /home/guerois/workspace/virfam/python/lib/hhsearch//hhsearch2 -i .//seq/seq_10 -d /home/guerois/workspace/virfam/python/profile_database/capsid_neck_tail.hhm -glob -cpu 7 -o .//seq/HHR/seq_10_vs_rec_db.hhr No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM 1 protein:vir:44 Length: 120 # N 98.2 4.1E-08 2.5E-11 61.1 9.6 104 1-106 10-120 (120) 2 protein:vir:80934 Length: 120 98.2 4.1E-08 2.5E-11 61.1 9.6 104 1-106 10-120 (120) 3 protein:vir:98924 Length: 113 97.7 8E-07 5E-10 54.0 9.2 105 1-106 3-113 (113) 4 protein:vir:9822 Length: 120 # 96.4 6.5E-05 4.1E-08 43.5 9.0 105 1-106 9-120 (120) 5 protein:vir:1582 Length: 117 # 96.4 6.3E-05 3.9E-08 43.6 8.5 105 1-106 2-117 (117) 6 protein:vir:3035 Length: 110 # 96.3 9.1E-05 5.6E-08 42.7 9.0 103 3-106 1-110 (110) 7 protein:vir:79686 Length: 118 96.1 0.00013 7.9E-08 41.9 8.7 105 1-106 2-118 (118) 8 protein:vir:102337 Length: 116 94.9 0.00029 1.8E-07 40.0 6.7 102 1-106 3-111 (116) 9 protein:vir:105466 Length: 120 92.1 0.0018 1.1E-06 35.6 6.2 102 1-106 1-115 (120) 10 protein:vir:102962 Length: 115 92.0 0.0031 1.9E-06 34.4 7.4 102 1-106 2-110 (115) 11 protein:vir:78985 Length: 115 88.8 0.0042 2.6E-06 33.6 5.3 99 1-106 1-109 (115) 12 protein:vir:105774 Length: 120 82.3 0.013 8.3E-06 30.9 4.7 103 1-104 1-120 (120) 13 protein:vir:4789 Length: 123 # 61.5 0.18 0.00011 24.7 5.6 98 1-106 7-121 (123) 14 protein:vir:81216 Length: 118 54.1 0.51 0.00032 22.2 7.5 102 1-106 1-114 (118) 15 protein:vir:5258 Length: 123 # 43.2 0.85 0.00053 21.0 6.9 101 1-104 1-123 (123) 16 protein:vir:2346 Length: 126 # 42.5 0.65 0.0004 21.6 5.4 81 1-106 1-81 (126) 17 protein:vir:7992 Length: 109 # 42.2 0.9 0.00056 20.8 8.5 97 1-106 1-107 (109) 18 protein:vir:105035 Length: 112 39.3 1 0.00063 20.5 6.7 96 1-106 1-101 (112) 19 protein:vir:1272 Length: 119 # 33.8 1.3 0.00083 19.9 7.4 100 1-106 1-113 (119) 20 protein:vir:105824 Length: 109 33.3 1.4 0.00085 19.8 8.4 97 1-106 1-107 (109) 21 protein:vir:102607 Length: 109 33.3 1.4 0.00085 19.8 8.4 97 1-106 1-107 (109) 22 protein:vir:93599 Length: 116 26.0 2 0.0012 18.9 7.7 101 1-106 1-111 (116) No 1 >protein:vir:44 Length: 120 # NCBI annotation: gp9 # Family: family:all:2747 # MgeID: mge:2 # MgeName: A118 # Cross-refs: genbank:acc:NP_463470;swissprot:trembl:q9t1b4;genbank:gi:16798792;uniprot:Q9T1B4;genbank:GeneID:922373 Probab=98.15 E-value=4.1e-08 Score=61.10 Aligned_cols=104 Identities=14% Similarity=0.077 Sum_probs=88.1 Q ss_pred CCCcccceeEEEEEEeccCCCCCCCC-cccCcccccceeeccCceeeeccccceeeceeEEEecccc------ccCCCCc Q lcl|NC_018848. 1 MSQVPRWLLRHRVSIEPYIGDSAYGP-RYGPAVTGVRALVAEQVRTVRDREGREVISTAQVITAPDT------VCPAESR 73 (106) Q Consensus 1 ms~ip~~~~rh~i~VE~y~G~~a~Gp-~ygppvt~~r~~v~e~~R~v~d~~G~evvS~a~v~~p~gt------~~Pa~Sr 73 (106) |-.||.+||.|+++++.+.|.+.||. +|+.|++--+|.++-++-..-+..+++++.++.|++-.+. +...||+ T Consensus 10 m~~iPk~~l~~sit~k~~~~~d~~g~~~y~~pv~I~nvRvd~~~~ysg~~n~rq~~~naviFi~a~~S~p~~~~~~~gsk 89 (120) T protein:vir:44 10 APPLPLDWLIHNISYEAYKEEDRHNQVVYEKGIEIEHVRVDFSKSNQIAGLSDSDRYDAVIFIDAVNSMNVPSDFVSRSR 89 (120) T ss_pred cCCcChhhccceEEEEEecCCCCCCCCcccCceeccCeEEecceeeecCCCCceeeeeeEEEEecccCCccceecCcCCE Confidence 77899999999999999999999986 5999999889998866665679999999999999998865 2366888 Q ss_pred eecCCCcEEEEEEeeccccCCCCCCceEEEeeC Q lcl|NC_018848. 74 ITLPTGRRTRVLSAAPHTAPGLPVPESLEVMCE 106 (106) Q Consensus 74 VTLP~Gr~trVl~~a~~D~~Gl~~P~hlei~le 106 (106) |. .+|++-.|..+.... +.-..+=|+||.+= T Consensus 90 I~-f~G~eytI~~i~~~~-~~sn~vh~yEleVi 120 (120) T protein:vir:44 90 IF-FSGKAYKIVKVIPCY-ATSNSVHHWEIEVI 120 (120) T ss_pred EE-eCCceEEEEeeeecc-CCCCceEEEEEEeC Confidence 87 899988888887665 44488999999888 No 2 >protein:vir:80934 Length: 120 # NCBI annotation: gp9 # Family: family:all:2747 # MgeID: mge:1886 # MgeName: A500 # Cross-refs: genbank:acc:YP_001468395;genbank:gi:157324969;genbank:GeneID:5601367 Probab=98.15 E-value=4.1e-08 Score=61.08 Aligned_cols=104 Identities=14% Similarity=0.062 Sum_probs=87.9 Q ss_pred CCCcccceeEEEEEEeccCCCCCCCC-cccCcccccceeeccCceeeeccccceeeceeEEEecccc------ccCCCCc Q lcl|NC_018848. 1 MSQVPRWLLRHRVSIEPYIGDSAYGP-RYGPAVTGVRALVAEQVRTVRDREGREVISTAQVITAPDT------VCPAESR 73 (106) Q Consensus 1 ms~ip~~~~rh~i~VE~y~G~~a~Gp-~ygppvt~~r~~v~e~~R~v~d~~G~evvS~a~v~~p~gt------~~Pa~Sr 73 (106) |-.||.+||.|+++++.+.|.+.||. +|+.|++--+|.++-++-..-+..+++++.++.|++-.+. ....||+ T Consensus 10 m~~iPk~~l~~sit~k~~~~~d~~g~~~y~~pv~I~nvRvd~~~~ysg~~n~rq~~~naviFi~a~~S~p~~~~~~~gsk 89 (120) T protein:vir:80 10 APPLPLDWLIHNISYEAYKEEGRHNQVVYEKGFEIEHVRVDFSKSNQIAGLSDSDRYDAVIFIDAVNSMNVPDDFISRSR 89 (120) T ss_pred cCCcChhhccceEEEEEecCCCCCCCccccCceeccCeEEecceeeecCCCCceeeeeeEEEEecccCCccceecccCCE Confidence 77899999999999999999999996 5999999889998866655579999999999999998865 2356888 Q ss_pred eecCCCcEEEEEEeeccccCCCCCCceEEEeeC Q lcl|NC_018848. 74 ITLPTGRRTRVLSAAPHTAPGLPVPESLEVMCE 106 (106) Q Consensus 74 VTLP~Gr~trVl~~a~~D~~Gl~~P~hlei~le 106 (106) |. .+|++-.|....... +.-..+=|+||.+= T Consensus 90 I~-f~G~eytI~~i~~~~-~~s~~vh~yEleVi 120 (120) T protein:vir:80 90 IF-FSGKAYKIVKVIPCY-ATSENVHHWEIEVI 120 (120) T ss_pred EE-eCCceEEEEEeeecc-CCCCceeEEEEEeC Confidence 87 899988888887665 44478999999888 No 3 >protein:vir:98924 Length: 113 # NCBI annotation: hypothetical protein # Family: family:all:2747 # MgeID: mge:1568 # MgeName: BCJA1c # Cross-refs: genbank:acc:YP_164421;genbank:gi:56694911;genbank:GeneID:3197315 Probab=97.68 E-value=8e-07 Score=54.00 Aligned_cols=105 Identities=17% Similarity=0.209 Sum_probs=85.8 Q ss_pred CCCcccceeEEEEEEeccCCCCCCCC-cccCcccccceeeccCceeeeccccceeeceeEEEecccc-----ccCCCCce Q lcl|NC_018848. 1 MSQVPRWLLRHRVSIEPYIGDSAYGP-RYGPAVTGVRALVAEQVRTVRDREGREVISTAQVITAPDT-----VCPAESRI 74 (106) Q Consensus 1 ms~ip~~~~rh~i~VE~y~G~~a~Gp-~ygppvt~~r~~v~e~~R~v~d~~G~evvS~a~v~~p~gt-----~~Pa~SrV 74 (106) |-.||.+||.|++++.-+.|.+.||- +|+.|++--+|.++-++..-.+..++.++.++.|++-.+. .....|+| T Consensus 3 m~~ipk~~l~~sit~k~~~~~dd~g~~~y~~pv~I~nvrv~~~~~ysgt~n~rq~~~naviF~ya~~S~p~~~~~~~ski 82 (113) T protein:vir:98 3 MPKPPIDFLVDSFMYKEYMGENSWSEPEYARPVLISNCRIDRGAEYTSTTSGRQLLYNAVVFCYEGMTTPLPQFKAQSVL 82 (113) T ss_pred cCcCChhhccceEEEEEecccCCCCCcccCCcEeecceEecccceeeccCCCceeeeeeEEEEecccCccceEecCCCeE Confidence 88999999999999999999999875 5999999899999988777779999999999999998876 45678888 Q ss_pred ecCCCcEEEEEEeeccccCCCCCCceEEEeeC Q lcl|NC_018848. 75 TLPTGRRTRVLSAAPHTAPGLPVPESLEVMCE 106 (106) Q Consensus 75 TLP~Gr~trVl~~a~~D~~Gl~~P~hlei~le 106 (106) . .+|+.-.+..+..-.-+.-.-.=|+||..= T Consensus 83 v-fdG~eytI~~i~~~~e~~sn~v~~yELEVi 113 (113) T protein:vir:98 83 H-FDGRDHVITKVIPNHEAYSKTLYSYELEVV 113 (113) T ss_pred E-eCCcceEEeeeccCcCCCCCceeEEEEEEC Confidence 7 788877777777554444445557766555 No 4 >protein:vir:9822 Length: 120 # NCBI annotation: putative minor capsid protein # Family: family:all:1526 # MgeID: mge:176 # MgeName: 315.4 # Cross-refs: genbank:acc:NP_795584;genbank:gi:28876337;genbank:GeneID:1257899 Probab=96.45 E-value=6.5e-05 Score=43.52 Aligned_cols=105 Identities=13% Similarity=0.124 Sum_probs=79.1 Q ss_pred CCCcccceeEEEEEEeccCCCCCCC-CcccCcccccceeeccCceeeeccccceeeceeEEEeccccccC------CCCc Q lcl|NC_018848. 1 MSQVPRWLLRHRVSIEPYIGDSAYG-PRYGPAVTGVRALVAEQVRTVRDREGREVISTAQVITAPDTVCP------AESR 73 (106) Q Consensus 1 ms~ip~~~~rh~i~VE~y~G~~a~G-p~ygppvt~~r~~v~e~~R~v~d~~G~evvS~a~v~~p~gt~~P------a~Sr 73 (106) |-+||.+|+.|.+++..+.|.+.|| ++|+-|++--.|.++-++-.--+..+++++.+|.|++=.+.-=| -|++ T Consensus 9 ip~ipk~~l~dsitlk~~~~~d~yg~~~y~~pi~I~nvrvd~~t~ySgt~N~Rqi~~navif~y~~~S~p~~~~~~~g~k 88 (120) T protein:vir:98 9 LAMIDKRLLIDELQVKLVKDKGDYGGFVYDEPFTLSPVRFDRNLATAGKDNARQETKPSVIFIYPKYCKTVADRSWVDAV 88 (120) T ss_pred cCcCChhhccceEEEEEecCcCCCCCeeecCceeeeeeEecccceecccCCCCeEEeeeEEEEeccCcceeeeecccccE Confidence 8899999999999999999999998 68999999889998855444458999999999999998887333 3555 Q ss_pred eecCCCcEEEEEEeeccccCCCCCCceEEEeeC Q lcl|NC_018848. 74 ITLPTGRRTRVLSAAPHTAPGLPVPESLEVMCE 106 (106) Q Consensus 74 VTLP~Gr~trVl~~a~~D~~Gl~~P~hlei~le 106 (106) |. .+|+.-.+..+..-.-+.-..==|+||..= T Consensus 89 i~-~~g~eYtI~kI~~~y~p~sn~vysyElEVi 120 (120) T protein:vir:98 89 VI-DGDTEYTVDKVIPVYHPLTNKIFCFEVEVI 120 (120) T ss_pred EE-eCCeeEEeeeeeecccCcCCcEEEEEEEEC Confidence 55 688877777777544333222234444333 No 5 >protein:vir:1582 Length: 117 # NCBI annotation: minor capsid protein # Family: family:all:2747 # MgeID: mge:32 # MgeName: phig1e # Cross-refs: genbank:acc:NP_695164;swissprot:trembl:o03932;genbank:gi:23455805;uniprot:O03932;genbank:GeneID:955538 Probab=96.37 E-value=6.3e-05 Score=43.60 Aligned_cols=105 Identities=17% Similarity=0.207 Sum_probs=79.0 Q ss_pred CCCcccceeEEEEE--EeccCCCCCCC-CcccCcccccceeeccCceeeeccccceeeceeEEEeccccc--cC---C-- Q lcl|NC_018848. 1 MSQVPRWLLRHRVS--IEPYIGDSAYG-PRYGPAVTGVRALVAEQVRTVRDREGREVISTAQVITAPDTV--CP---A-- 70 (106) Q Consensus 1 ms~ip~~~~rh~i~--VE~y~G~~a~G-p~ygppvt~~r~~v~e~~R~v~d~~G~evvS~a~v~~p~gt~--~P---a-- 70 (106) |-.||.+|+.|.|+ .+.++|.+.|| ++|+-|++--.|.++-++-.--+..+++++.+|.|++=.+.- .| . T Consensus 2 m~~ipk~~l~~sitlk~~~~~~~d~yg~~~y~~pi~I~nvrvd~~t~ysgt~n~Rq~~~navif~y~~~s~P~~~~~~~~ 81 (117) T protein:vir:15 2 MMKPPKWMCQQTITLTLTDPTKTDEWGQLLTGEPVTIEHCVVQPQTIYSGSNNDRTIVANAVVFVYAGISNPLLTVTKNN 81 (117) T ss_pred CCccchhhccceEEEEEeccCCcCCCCCeeecCceeeeeeEecccceecccCCCCeEEeceEEEEecccCCcceEEeccc Confidence 99999999999999 55889999998 689999988889988544444589999999999999998873 34 2 Q ss_pred -CCceecCCCcEEEEEEeeccccCCCCCCceEEEeeC Q lcl|NC_018848. 71 -ESRITLPTGRRTRVLSAAPHTAPGLPVPESLEVMCE 106 (106) Q Consensus 71 -~SrVTLP~Gr~trVl~~a~~D~~Gl~~P~hlei~le 106 (106) ||+|. .+|+.-.+..+..-.-+.-..==|+||..= T Consensus 82 ~g~ki~-f~G~eYtI~~i~~~~ep~sn~vy~yElEVi 117 (117) T protein:vir:15 82 VGSKLV-FEGEEYTVQKIIDNREPFSNELHSYELEVL 117 (117) T ss_pred ccceee-eCCeeEEeeeeeecccCcCCcEEEEEEEeC Confidence 77787 788877777777544333222234444333 No 6 >protein:vir:3035 Length: 110 # NCBI annotation: minor capsid protein # Family: family:all:1526 # MgeID: mge:61 # MgeName: PhiNIH1.1 # Cross-refs: genbank:acc:NP_438148;genbank:gi:16271811;genbank:GeneID:929234 Probab=96.29 E-value=9.1e-05 Score=42.75 Aligned_cols=103 Identities=14% Similarity=0.114 Sum_probs=78.2 Q ss_pred CcccceeEEEEEEeccCCCCCCC-CcccCcccccceeeccCceeeeccccceeeceeEEEeccccccC------CCCcee Q lcl|NC_018848. 3 QVPRWLLRHRVSIEPYIGDSAYG-PRYGPAVTGVRALVAEQVRTVRDREGREVISTAQVITAPDTVCP------AESRIT 75 (106) Q Consensus 3 ~ip~~~~rh~i~VE~y~G~~a~G-p~ygppvt~~r~~v~e~~R~v~d~~G~evvS~a~v~~p~gt~~P------a~SrVT 75 (106) +||.+|+.|.+++..+.|.+.|| ++|+-|++--.|.++-++-.--+..+++++.+|.|++=.+.--| -|++|. T Consensus 1 ~ipk~~l~~sit~k~~~~~d~yg~~~y~~pi~I~nvrvd~~t~ysgt~n~rq~~~navif~y~~~s~p~~~~~~~g~ki~ 80 (110) T protein:vir:30 1 MIDKRLLIDELQVKLVKDKGDYGGFVYDEPFTLSPVRFDRNLATAGKDNARQETKPSVIFIYPKYCKTVADRSWVDAVVI 80 (110) T ss_pred CcChhhcceeEEEEEecCcCCCCCeeecCceeeeeeEecccceecccCCCCeEEeeeEEEEeccCcceeeeecccccEEE Confidence 99999999999999999999998 68999999889998854444458999999999999998887333 355555 Q ss_pred cCCCcEEEEEEeeccccCCCCCCceEEEeeC Q lcl|NC_018848. 76 LPTGRRTRVLSAAPHTAPGLPVPESLEVMCE 106 (106) Q Consensus 76 LP~Gr~trVl~~a~~D~~Gl~~P~hlei~le 106 (106) .+|+.-.+..+....-+.-..==|+||..= T Consensus 81 -~~g~eYtI~kii~~~~p~sn~vy~yElEVi 110 (110) T protein:vir:30 81 -DGDTEYTVDKVIPVYHPLTNKIFCFEVEVI 110 (110) T ss_pred -eCCeeEEeeeeeeccCCcCCcEEEEEEEEC Confidence 688887888777555443222234444333 No 7 >protein:vir:79686 Length: 118 # NCBI annotation: hypothetical protein # Family: family:all:2747 # MgeID: mge:1873 # MgeName: LL-H # Cross-refs: genbank:acc:YP_001285885;genbank:gi:148750842;genbank:GeneID:5220385 Probab=96.05 E-value=0.00013 Score=41.94 Aligned_cols=105 Identities=15% Similarity=0.140 Sum_probs=78.8 Q ss_pred CCCcccceeEEEEEE---eccCCCCCCCCc-ccCcccccceeeccCceeeeccccceeeceeEEEecccc--ccC---C- Q lcl|NC_018848. 1 MSQVPRWLLRHRVSI---EPYIGDSAYGPR-YGPAVTGVRALVAEQVRTVRDREGREVISTAQVITAPDT--VCP---A- 70 (106) Q Consensus 1 ms~ip~~~~rh~i~V---E~y~G~~a~Gp~-ygppvt~~r~~v~e~~R~v~d~~G~evvS~a~v~~p~gt--~~P---a- 70 (106) |-.||.+|+.|.|++ +++.|..-||.. |+-|++--.|.++-++-.--+..+++++.+|.|++=.+. ..| . T Consensus 2 m~~ipk~~l~~sit~k~~~~~~~~D~yg~~~y~~p~~I~nvrvd~~t~ySgt~n~rq~~~navif~y~~~s~p~~~~~~~ 81 (118) T protein:vir:79 2 KLPIPYQMAVSTVHLKLTDQSAKKDRYGRTVPTWEGDITKCVVNMQTTYSGTNNDRQIVANGLIVMYAGYSNPIPTLTKE 81 (118) T ss_pred CCccchhhccceEEEEEeccccCcCCCCCeeccCCeeeeeeEecccceecccCCCCeEEeceEEEEecccCccccEEecc Confidence 999999999999999 489999999865 999999889998854444458999999999999999887 345 4 Q ss_pred --CCceecCCCcEEEEEEeeccccCCCCCCceEEEeeC Q lcl|NC_018848. 71 --ESRITLPTGRRTRVLSAAPHTAPGLPVPESLEVMCE 106 (106) Q Consensus 71 --~SrVTLP~Gr~trVl~~a~~D~~Gl~~P~hlei~le 106 (106) ||+|. .+|+.-.+..+..-.-+.-..==|+||..= T Consensus 82 s~g~kiv-fdG~eYtI~~i~~~~ep~sn~vy~yElEVi 118 (118) T protein:vir:79 82 NLGSKLT-YQGLDYTVTSLNRFDQPGTEDLYCYELEVI 118 (118) T ss_pred cccccee-eCCeeEEeeeeeecccCcCCcEEEEEEEeC Confidence 55676 789877777777444333222234444333 No 8 >protein:vir:102337 Length: 116 # NCBI annotation: hypothetical protein # Family: family:all:2370 # MgeID: mge:1566 # MgeName: phi CD119 # Cross-refs: genbank:acc:YP_529562;genbank:gi:90592647;genbank:GeneID:3974469 Probab=94.90 E-value=0.00029 Score=40.00 Aligned_cols=102 Identities=11% Similarity=0.119 Sum_probs=75.0 Q ss_pred CCCcccceeEEEEEEeccCC----CCCC-CCcccCcc-cccceeeccCceeeeccccceeeceeEEEeccccccCCCCce Q lcl|NC_018848. 1 MSQVPRWLLRHRVSIEPYIG----DSAY-GPRYGPAV-TGVRALVAEQVRTVRDREGREVISTAQVITAPDTVCPAESRI 74 (106) Q Consensus 1 ms~ip~~~~rh~i~VE~y~G----~~a~-Gp~ygppv-t~~r~~v~e~~R~v~d~~G~evvS~a~v~~p~gt~~Pa~SrV 74 (106) -.||.++++-..|+|.++.= .++. -.++...+ +..+|.+..+...+.+.+-....++...||.|+..+++||+| T Consensus 3 eadiLe~lY~d~c~I~r~~~~~d~~t~it~~~e~~~i~e~~pCrlS~~~~~~~~~~~~~~~~~~kLF~~PeidIk~Gd~I 82 (116) T protein:vir:10 3 EADILALTYFCKMTIRRCVSIKNEDTGVTYFNENVVIAEDVPCGLNGNIPNVIDTDITNSISVFELYCRPEIDLQVGDIL 82 (116) T ss_pred hHHHhhhhccCeEEEEEeeeeeCCcccccccccceeeeCCcceEEeecccccccCcccceeEEEEEEeccCcccCCCCEE Confidence 34899999999999998753 2222 24566553 778999999887777655555667789999999999999999 Q ss_pred ecCC-CcEEEEEEeeccccCCCCCCceEEEeeC Q lcl|NC_018848. 75 TLPT-GRRTRVLSAAPHTAPGLPVPESLEVMCE 106 (106) Q Consensus 75 TLP~-Gr~trVl~~a~~D~~Gl~~P~hlei~le 106 (106) ++=. ++...... -|.+..=|.|-||.|+ T Consensus 83 ~Vt~~~g~~~~~~----ag~p~~Y~sHqEi~L~ 111 (116) T protein:vir:10 83 DITLENGNVETFI----ASKPFPYSSHLQVNLT 111 (116) T ss_pred EEecCCCeEEEEE----cCCCcccCCcceEEEE Confidence 8762 22333333 3455568899999999 No 9 >protein:vir:105466 Length: 120 # NCBI annotation: hypothetical protein # Family: family:all:2370 # MgeID: mge:1502 # MgeName: KC5a # Cross-refs: genbank:acc:YP_529876;genbank:gi:90592616;genbank:GeneID:3974530 Probab=92.09 E-value=0.0018 Score=35.63 Aligned_cols=102 Identities=21% Similarity=0.053 Sum_probs=69.5 Q ss_pred CCC------cccceeEEEEEEeccCC---CCCCCCcccCcccccceeeccCce-eeeccccceeeceeEEEeccccccCC Q lcl|NC_018848. 1 MSQ------VPRWLLRHRVSIEPYIG---DSAYGPRYGPAVTGVRALVAEQVR-TVRDREGREVISTAQVITAPDTVCPA 70 (106) Q Consensus 1 ms~------ip~~~~rh~i~VE~y~G---~~a~Gp~ygppvt~~r~~v~e~~R-~v~d~~G~evvS~a~v~~p~gt~~Pa 70 (106) |+- -.++++-..|+|+++.= +|-.+..+=+-.+..||.+..+.- .+-..+=....++...||.|+..+++ T Consensus 1 m~~~~~~rkale~lY~d~c~I~r~~~~~~~giT~~~~~~i~e~ipCrlS~~~l~~~~~~~~~~~~~~~kLF~~PeidIk~ 80 (120) T protein:vir:10 1 MSYFNGLKNALPKLWNDRVKIVGTQPTKHGYITNSEDVTIVEDEPAKVVLKGQSTSEQSFFGTDEYDAKLIIRNGIKIPA 80 (120) T ss_pred CchHHHHHHHhhhhhcCeEEEEEeeeeecCCccCceeeEEecCCcceEeeccccccccccccceeeEEEEEeecCcccCC Confidence 543 35677888888887642 233344555556678998885544 33322223457888999999999999 Q ss_pred CCceecC--CCcEEEEEEeeccccCCCC-CCceEEEeeC Q lcl|NC_018848. 71 ESRITLP--TGRRTRVLSAAPHTAPGLP-VPESLEVMCE 106 (106) Q Consensus 71 ~SrVTLP--~Gr~trVl~~a~~D~~Gl~-~P~hlei~le 106 (106) ||+|++= .|+......+ +.+++ =|.|-||.|+ T Consensus 81 Gd~I~Vt~~nG~~~~y~~s----~~p~a~Y~sHqEI~L~ 115 (120) T protein:vir:10 81 GADIYVTDVNGQMTKYKRA----SKGYSGYFSHQEVAMV 115 (120) T ss_pred CCEEEEEecCCCEEEEEec----cCCCccccccceEEEE Confidence 9999874 5777766543 34443 6889999999 No 10 >protein:vir:102962 Length: 115 # NCBI annotation: hypothetical protein # Family: family:all:2370 # MgeID: mge:1461 # MgeName: EJ-1 # Cross-refs: genbank:acc:NP_945288;genbank:gi:39653723;uniprot:Q708M4;genbank:GeneID:2672876 Probab=91.96 E-value=0.0031 Score=34.36 Aligned_cols=102 Identities=9% Similarity=0.074 Sum_probs=69.1 Q ss_pred CCCcccceeEEEEEEeccC---CCCCCCCcccCcccccceeeccCce-eeeccccceeeceeEEEeccccccCCCCceec Q lcl|NC_018848. 1 MSQVPRWLLRHRVSIEPYI---GDSAYGPRYGPAVTGVRALVAEQVR-TVRDREGREVISTAQVITAPDTVCPAESRITL 76 (106) Q Consensus 1 ms~ip~~~~rh~i~VE~y~---G~~a~Gp~ygppvt~~r~~v~e~~R-~v~d~~G~evvS~a~v~~p~gt~~Pa~SrVTL 76 (106) .-.-.++++--.|+|.++. =.|..+..+=+-.+..+|.+..+.- .+..-+=....++..++|.|+..+++||+|++ T Consensus 2 ark~le~lY~d~ctI~r~~k~~~~g~T~~~~~~i~e~ipCrlS~~~l~~~~q~~~~~~~~~~kLF~~PeidIk~Gd~I~V 81 (115) T protein:vir:10 2 LRQSLDCLYACKMTVKGYTEQEIDGLTSMLESVLLEDIPCRISQMSNSSTNGSDYQANGYDMKLFCSVAYDIPAGCKIEV 81 (115) T ss_pred chhHhhhhhcCeEEEEEeecccCCCccCccceEEecCCcceEEeccCcccccccccceeEEEEEEeecCcccCCCCEEEE Confidence 2333455666777777664 2366677777777889999885543 33222223467788999999999999999987 Q ss_pred C-CCcEEEEEEeeccccCCC--CCCceEEEeeC Q lcl|NC_018848. 77 P-TGRRTRVLSAAPHTAPGL--PVPESLEVMCE 106 (106) Q Consensus 77 P-~Gr~trVl~~a~~D~~Gl--~~P~hlei~le 106 (106) = .++.++...++ .++ .-|.|-||.|+ T Consensus 82 t~~~g~~~~~~~s----~~~~~~Y~tHqEV~L~ 110 (115) T protein:vir:10 82 TDRNGHVKVFTRS----NVPIGQYWSHQEIAIK 110 (115) T ss_pred EcCCCeEEEEEec----CCccccccccceEEEE Confidence 4 34455444443 232 68999999999 No 11 >protein:vir:78985 Length: 115 # NCBI annotation: hypothetical protein # Family: family:all:2370 # MgeID: mge:1861 # MgeName: phiC2 # Cross-refs: genbank:acc:YP_001110728;genbank:gi:134287345;genbank:GeneID:4955159 Probab=88.81 E-value=0.0042 Score=33.62 Aligned_cols=99 Identities=13% Similarity=0.157 Sum_probs=69.3 Q ss_pred CC----CcccceeEEEEEEeccC----C-CCCCCCcccCcccccceeeccCc-eeeeccccceeeceeEEEeccccccCC Q lcl|NC_018848. 1 MS----QVPRWLLRHRVSIEPYI----G-DSAYGPRYGPAVTGVRALVAEQV-RTVRDREGREVISTAQVITAPDTVCPA 70 (106) Q Consensus 1 ms----~ip~~~~rh~i~VE~y~----G-~~a~Gp~ygppvt~~r~~v~e~~-R~v~d~~G~evvS~a~v~~p~gt~~Pa 70 (106) |. .-.++++-..|+|.++. . .|.....+-+-.+..+|.+..+. ..+...+=....++..++|.|+..+++ T Consensus 1 ~~~~~rk~le~lY~d~c~I~r~~~~~dp~tgiT~~~~~~i~e~~pCrlS~~~~~~~~~~~~~~~~~~~kLF~~PeidIk~ 80 (115) T protein:vir:78 1 MVSKTRKAIEMLYRYKCTIVEYQPIKDPVTKRTNNKEVIVLENQPCKLSYKNIVSATEGKLAKLEQTIKLFISPDIEIKA 80 (115) T ss_pred CchHHHHHhhhhhcCeEEEEeeeeeeccccceeccccEEEEcCCcceEEeccCCccccccccceeEEEEEEeecCcccCC Confidence 32 23456677888888872 1 35677778877788999998655 333322233577888999999999999 Q ss_pred CCceecCCCcEEEEEEeeccccCCCCCCceEEEeeC Q lcl|NC_018848. 71 ESRITLPTGRRTRVLSAAPHTAPGLPVPESLEVMCE 106 (106) Q Consensus 71 ~SrVTLP~Gr~trVl~~a~~D~~Gl~~P~hlei~le 106 (106) ||+|++=. + .. ..-+.+..=|.|-||.|+ T Consensus 81 Gd~I~Vt~-~--~y----~~a~~p~~Y~tHqEI~L~ 109 (115) T protein:vir:78 81 GSKLIIND-K--EY----VRSGESAIYPNHQEIILE 109 (115) T ss_pred CCEEEEec-e--Ee----EEeecCeecCCcceEEEE Confidence 99999742 2 11 224456678899999999 No 12 >protein:vir:105774 Length: 120 # NCBI annotation: gp13 # Family: family:all:27493 # MgeID: mge:1501 # MgeName: ES18 # Cross-refs: genbank:acc:YP_224151;genbank:gi:62362226;genbank:GeneID:3342527 Probab=82.29 E-value=0.013 Score=30.86 Aligned_cols=103 Identities=15% Similarity=0.149 Sum_probs=73.3 Q ss_pred CCCcccceeEEEEEEeccCCCCCCC-CcccCcccccceeeccCceeeeccccceeeceeEEEecccc-ccCC-------- Q lcl|NC_018848. 1 MSQVPRWLLRHRVSIEPYIGDSAYG-PRYGPAVTGVRALVAEQVRTVRDREGREVISTAQVITAPDT-VCPA-------- 70 (106) Q Consensus 1 ms~ip~~~~rh~i~VE~y~G~~a~G-p~ygppvt~~r~~v~e~~R~v~d~~G~evvS~a~v~~p~gt-~~Pa-------- 70 (106) ||.+-+|=..-.+++=|-.|+.=+| ++||+|. ..-|--.-...+..|.-|+|++.+-+||...-. -++. T Consensus 1 MSs~A~wSYTa~ATiw~~~~~d~~~~~~f~~P~-lI~Cdy~~~~~~~~d~~G~E~v~~nt~wTE~~~a~~gd~~p~~~~Y 79 (120) T protein:vir:10 1 MSEIARWSYTNVATIYPRVYDDWNSTWTNGTPY-LIDCTWTANNEVAVDASGKEFTTNLIFFTELKRNGVTANMPQRDWY 79 (120) T ss_pred CccccccccccceeeeeccCCccCCcccccCCe-EEeccccCCcceeeccccceeeeeeeEEEeeccccCCcccccccce Confidence 9999999999999999999986666 6899997 599987777788889999999999999988754 2222 Q ss_pred ---CCceecCCCcEE---EEEEeeccccCCC-CCCceEEEe Q lcl|NC_018848. 71 ---ESRITLPTGRRT---RVLSAAPHTAPGL-PVPESLEVM 104 (106) Q Consensus 71 ---~SrVTLP~Gr~t---rVl~~a~~D~~Gl-~~P~hlei~ 104 (106) |.-=.+++...+ +|+++.+-+--=. -.||+--|. T Consensus 80 I~iG~st~~sDP~~AGAdeI~~V~~~adTF~r~~~DyaIiT 120 (120) T protein:vir:10 80 IARGDTTALSDPLKAGANVIRAVTDWDMSFFGEEPDYKIMT 120 (120) T ss_pred EEEecccCCCCCeeeChHHHHHHhhhhhhhcCCCCceeeeC Confidence 223334444444 5566554333222 344444444 No 13 >protein:vir:4789 Length: 123 # NCBI annotation: putative minor capsid protein 2 # Family: family:all:1526 # MgeID: mge:104 # MgeName: MM1 # Cross-refs: genbank:acc:NP_150169;swissprot:trembl:q94m42;genbank:gi:15088780;uniprot:Q94M42;genbank:GeneID:955991 Probab=61.52 E-value=0.18 Score=24.67 Aligned_cols=98 Identities=13% Similarity=0.153 Sum_probs=60.4 Q ss_pred CCCcccceeEEEEEEeccCCCCCCC-CcccCcccccceeeccCceeee--ccccceeece-------eEEEeccccccC- Q lcl|NC_018848. 1 MSQVPRWLLRHRVSIEPYIGDSAYG-PRYGPAVTGVRALVAEQVRTVR--DREGREVIST-------AQVITAPDTVCP- 69 (106) Q Consensus 1 ms~ip~~~~rh~i~VE~y~G~~a~G-p~ygppvt~~r~~v~e~~R~v~--d~~G~evvS~-------a~v~~p~gt~~P- 69 (106) |-+||.+|+.-.|++--++|.+-|| ++|+-|++-=.|.++- +++- +..-+.++.+ |.|+|=++.--| T Consensus 7 ~p~ipK~~l~dsit~k~~~~kddyg~~~y~epvtI~nvr~dr--~t~ysG~~N~r~~taN~~~~~k~aViflY~~~s~p~ 84 (123) T protein:vir:47 7 LKGIDKRLLKDVLTIKKVADKNDYGDEVYSEPLTIKNVRFDR--SVGGSGNRNSKTGTGNSKSRQKQGVIYLYPSLSFVT 84 (123) T ss_pred cCcCChhhcceeEEEEEecCCCCcCCceeccceEeeeeEEee--ccccCCcccCcceecccccccCceEEEEeccccccc Confidence 9999999999999999999999998 5789999877777653 3443 4555667777 888887765222 Q ss_pred -CCCce--ecCCC-cEEEEEEe--eccccCCCCCCceEEEeeC Q lcl|NC_018848. 70 -AESRI--TLPTG-RRTRVLSA--APHTAPGLPVPESLEVMCE 106 (106) Q Consensus 70 -a~SrV--TLP~G-r~trVl~~--a~~D~~Gl~~P~hlei~le 106 (106) --+-+ -+-+| +.-.+-.. .+.+ =+-++-.|| T Consensus 85 ~d~~~~~~kv~dg~~EYtI~kIi~n~ys------n~vysYELE 121 (123) T protein:vir:47 85 VDNSWMGAKVNDGIGDYTINGFQTNYYD------GEIFSQEIE 121 (123) T ss_pred eeccccceEEEcCCccEEecceeccccC------CcEEEEEEE Confidence 11111 01223 33222222 1111 233444445 No 14 >protein:vir:81216 Length: 118 # NCBI annotation: gp9 # Family: family:all:10295 # MgeID: mge:1893 # MgeName: BFK20 # Cross-refs: genbank:acc:YP_001456739;genbank:gi:157168382;uniprot:Q9MBJ6;genbank:GeneID:5580339 Probab=54.08 E-value=0.51 Score=22.18 Aligned_cols=102 Identities=23% Similarity=0.240 Sum_probs=60.9 Q ss_pred CCCcccceeEEEEEEecc-CCCCCCCC-c---ccCccc-ccceeeccCceee--eccccceeeceeEEEecccccc--CC Q lcl|NC_018848. 1 MSQVPRWLLRHRVSIEPY-IGDSAYGP-R---YGPAVT-GVRALVAEQVRTV--RDREGREVISTAQVITAPDTVC--PA 70 (106) Q Consensus 1 ms~ip~~~~rh~i~VE~y-~G~~a~Gp-~---ygppvt-~~r~~v~e~~R~v--~d~~G~evvS~a~v~~p~gt~~--Pa 70 (106) |++| |--.|++-|- .=.+-||- . |++|+. ++.-.+.-|.+.- .+.+--.|+|.=+.+.|+||.+ =| T Consensus 1 m~~~----F~~~v~ilRa~~~~~~yg~d~~~dw~~pv~ipV~~~vSvQPv~StE~~~~r~~vVt~w~l~~Ppg~d~~Lra 76 (118) T protein:vir:81 1 MTVI----FVNAVTVLRAREVGSVYSSEKTLTWDDPVRIDVPFLVSVQPRGSTEGGTDRPTVVSAWWMCTPPGTDLDLRP 76 (118) T ss_pred Ceee----eeeeEEEecCCccccccCCCcccccCCceeeeccCcceeeecCccccCCCCceeeeeeEeecCCCCCcCCCc Confidence 8775 6666666541 22222222 1 344332 1111223444333 4677778899999999999966 79 Q ss_pred CCceecCCCcEEEEEEeecc--ccCCCCCCceEEEeeC Q lcl|NC_018848. 71 ESRITLPTGRRTRVLSAAPH--TAPGLPVPESLEVMCE 106 (106) Q Consensus 71 ~SrVTLP~Gr~trVl~~a~~--D~~Gl~~P~hlei~le 106 (106) .+||.+-.|-.-+|...--+ +---...=.|+|-+|| T Consensus 77 ~DRVr~a~G~~~eV~G~P~~wp~P~~t~~v~Hvea~Le 114 (118) T protein:vir:81 77 EDRVELATGLQLEVVGQPLRWPDPVNQDQVHHVEANLE 114 (118) T ss_pred cceeeeccccEEEEecCcccccCccccccccceeEEEE Confidence 99999877877777654432 1112234469999999 No 15 >protein:vir:5258 Length: 123 # NCBI annotation: hypothetical protein # Family: family:all:4880 # MgeID: mge:117 # MgeName: Aaphi23 # Cross-refs: genbank:acc:NP_852763;genbank:gi:31544038;uniprot:Q776V7;genbank:GeneID:2777139 Probab=43.24 E-value=0.85 Score=20.96 Aligned_cols=101 Identities=19% Similarity=0.221 Sum_probs=61.8 Q ss_pred CCCcc---cc---eeEEEEEEeccCC-CCCCCCcccCcccccceeeccCceee--eccccceeeceeEEEeccccccCCC Q lcl|NC_018848. 1 MSQVP---RW---LLRHRVSIEPYIG-DSAYGPRYGPAVTGVRALVAEQVRTV--RDREGREVISTAQVITAPDTVCPAE 71 (106) Q Consensus 1 ms~ip---~~---~~rh~i~VE~y~G-~~a~Gp~ygppvt~~r~~v~e~~R~v--~d~~G~evvS~a~v~~p~gt~~Pa~ 71 (106) |++|+ .| =|+++++|.+-.| .+..|+.-......+.|.|.-..-.- +-++|+++..+=+||+.--+.+ | T Consensus 1 m~~ldvs~v~ldpdF~~titv~R~~g~~~~~g~~~~t~~~t~~avVqP~~~~dlq~LpeG~ri~~sIkI~Tq~~L~v--G 78 (123) T protein:vir:52 1 MSLINQSGRFLNSRFRQQITVQKQSGSHSASGFDVRYEKQQITAIVIPTSPNDVLLLPEGERYLPSIKVYTQQQLNI--G 78 (123) T ss_pred CCcccccccccCcccCceEEEEccCccEeCCccccccccceEEEEEeeCChhhcccccccccccceEEEEecccccc--c Confidence 66553 11 1699999999766 23334433333334667664333222 3589999999999999885544 6 Q ss_pred CceecCCCcEEEEEEee-------------ccccCCCCCCceEEEe Q lcl|NC_018848. 72 SRITLPTGRRTRVLSAA-------------PHTAPGLPVPESLEVM 104 (106) Q Consensus 72 SrVTLP~Gr~trVl~~a-------------~~D~~Gl~~P~hlei~ 104 (106) +.|. -.|.+=||++++ +||+---+--.-.++. T Consensus 79 D~vl-w~G~~YrVi~~~d~s~YGYy~~i~~~~~~t~~~~~~~f~~t 123 (123) T protein:vir:52 79 DLVD-YRGQTYKIKTAANWGDYGYYNNIGVRHSQTAKVDSTGFTVT 123 (123) T ss_pred cEEE-eCCcEEEEEEcCCccccceecceeecccccCccccccceeC Confidence 6554 899999999876 3444332222334444 No 16 >protein:vir:2346 Length: 126 # NCBI annotation: gp16 # Family: family:all:2818 # MgeID: mge:51 # MgeName: Bxb1 # Cross-refs: genbank:acc:NP_075283;genbank:gi:12657870;genbank:GeneID:920135 Probab=42.54 E-value=0.65 Score=21.61 Aligned_cols=81 Identities=19% Similarity=0.181 Sum_probs=40.8 Q ss_pred CCCcccceeEEEEEEeccCCCCCCCCcccCcccccceeeccCceeeeccccceeeceeEEEeccccccCCCCceecCCCc Q lcl|NC_018848. 1 MSQVPRWLLRHRVSIEPYIGDSAYGPRYGPAVTGVRALVAEQVRTVRDREGREVISTAQVITAPDTVCPAESRITLPTGR 80 (106) Q Consensus 1 ms~ip~~~~rh~i~VE~y~G~~a~Gp~ygppvt~~r~~v~e~~R~v~d~~G~evvS~a~v~~p~gt~~Pa~SrVTLP~Gr 80 (106) ||-++ .|+.||.|...+.-.+-=--+.+.|.+|.-++- |-.+-||.=.++- |.|. T Consensus 1 mslld------------------~g~~y~~p~d~~~~v~VYPe~~v~D~dGNt~~~------Ps~~gI~~~ArfQ-v~~q 55 (126) T protein:vir:23 1 MSLLD------------------RGGTYGSPEDGFDPVTVYPEVTRKDRLGNTLVG------PSLTGIETVARFQ-VQGQ 55 (126) T ss_pred Ccccc------------------CCcccCCCcccCcceEecceEEEeeCCCCeeec------CCCCCceeEEEEE-ecCc Confidence 66544 377888887655544444445667999987643 3334344333333 2222 Q ss_pred EEEEEEeeccccCCCCCCceEEEeeC Q lcl|NC_018848. 81 RTRVLSAAPHTAPGLPVPESLEVMCE 106 (106) Q Consensus 81 ~trVl~~a~~D~~Gl~~P~hlei~le 106 (106) .-+-.-.+-.|..|..++.-+.+-|- T Consensus 56 SgTsarRaE~d~~G~~te~V~~~r~~ 81 (126) T protein:vir:23 56 SGTSARRAEMDDIGDMTEQVYTMRLP 81 (126) T ss_pred cccccchhhccCCCCCCceEEEEEee Confidence 11111123445555555554444443 No 17 >protein:vir:7992 Length: 109 # NCBI annotation: gp8 # Family: family:all:6972 # MgeID: mge:151 # MgeName: Che8 # Cross-refs: genbank:acc:NP_817346;genbank:gi:29565774;genbank:GeneID:1259001 Probab=42.16 E-value=0.9 Score=20.84 Aligned_cols=97 Identities=20% Similarity=0.251 Sum_probs=58.0 Q ss_pred CCCcccceeEEEEEEeccCCCCCCC-----CcccCccccccee-eccCceeeeccccc--eeeceeEEEeccccccCCCC Q lcl|NC_018848. 1 MSQVPRWLLRHRVSIEPYIGDSAYG-----PRYGPAVTGVRAL-VAEQVRTVRDREGR--EVISTAQVITAPDTVCPAES 72 (106) Q Consensus 1 ms~ip~~~~rh~i~VE~y~G~~a~G-----p~ygppvt~~r~~-v~e~~R~v~d~~G~--evvS~a~v~~p~gt~~Pa~S 72 (106) |+-. --++++--||.|+++.| |+|||-+ ++++. ++-+.|.+ |-+|. .-+.+--.|+|+|+-+---| T Consensus 1 mtfp----~~~tVT~~P~~G~~sD~LGN~vP~FGp~V-~v~a~q~APHvq~~-~t~~~te~e~~dVDL~lPp~spV~v~~ 74 (109) T protein:vir:79 1 MTFP----TAYTVTHYPHVGDSSDGLGNTVPQFGSGV-SVPVIQLAPHVQVV-GTYSIVETETIDVDLYLPPGSPVKVKD 74 (109) T ss_pred Cccc----ceeeEeeccccccccccccccCccccCCC-ccceeeecCceeee-eccccceeeeEEEEeecCCCCchhhhh Confidence 6533 34578888999998877 9999998 68876 33443443 34432 22334455777777555566 Q ss_pred ceecCCCcEEEEEEeeccccC--CCCCCceEEEeeC Q lcl|NC_018848. 73 RITLPTGRRTRVLSAAPHTAP--GLPVPESLEVMCE 106 (106) Q Consensus 73 rVTLP~Gr~trVl~~a~~D~~--Gl~~P~hlei~le 106 (106) |+. -+|..-.|+++.--.++ |.+ --+-..|. T Consensus 75 R~g-~~~~~fdVV~~RD~t~GFHGW~--PGlvaELr 107 (109) T protein:vir:79 75 RVG-YGPDVFDVVAVRDWNMGFHGWA--PGLVAELR 107 (109) T ss_pred hcc-cCCceEEEEEeeeccCcccccC--cceeeeee Confidence 776 57888899887643332 221 11222333 No 18 >protein:vir:105035 Length: 112 # NCBI annotation: Gp9 # Family: family:all:11389 # MgeID: mge:1465 # MgeName: phiKO2 # Cross-refs: genbank:acc:YP_006589;genbank:gi:46402095;genbank:GeneID:2777900 Probab=39.35 E-value=1 Score=20.53 Aligned_cols=96 Identities=21% Similarity=0.176 Sum_probs=57.0 Q ss_pred CCCcccceeEEEEEEeccC-CCCCCC-Cc-cc-CcccccceeeccC-ceeeeccccceeeceeEEEeccccccCCCCcee Q lcl|NC_018848. 1 MSQVPRWLLRHRVSIEPYI-GDSAYG-PR-YG-PAVTGVRALVAEQ-VRTVRDREGREVISTAQVITAPDTVCPAESRIT 75 (106) Q Consensus 1 ms~ip~~~~rh~i~VE~y~-G~~a~G-p~-yg-ppvt~~r~~v~e~-~R~v~d~~G~evvS~a~v~~p~gt~~Pa~SrVT 75 (106) |+|-+.- |+|+|+++... +..++| ++ .. ..+..+-|.|... -|....++..+...+..+.+---..+=+..||. T Consensus 1 m~M~aG~-L~~RItiq~~~~~~D~~G~~~~~~W~~~~tvWA~v~~~sg~E~~~A~~~~~~~t~~f~IRyr~dI~~~mRI~ 79 (112) T protein:vir:10 1 MSLKPGD-MNCRITIGYLQSGRGPLGEPLPEKLVESGKAWAKRELVSGRKVRTMDQQQVMETCLFTVYPGVVVDIDWKIT 79 (112) T ss_pred CCCCccc-cCCcEEEEeeeeccCCCCCEeccceeeeEEEEEEEEccCchheeecccccceeeEEEEEeeCCCCCcccEEE Confidence 9999999 99999999876 333444 32 21 2333456665432 222233444444555556555444456788887 Q ss_pred cCCCcEEEEEEeeccccCCCCCCceEEEeeC Q lcl|NC_018848. 76 LPTGRRTRVLSAAPHTAPGLPVPESLEVMCE 106 (106) Q Consensus 76 LP~Gr~trVl~~a~~D~~Gl~~P~hlei~le 106 (106) -+|+.-.+.++..++ ...+.++ T Consensus 80 -~~gr~y~I~~Vd~~~--------~r~llc~ 101 (112) T protein:vir:10 80 -TKDLVYTVRNIDRKT--------DQIIITG 101 (112) T ss_pred -ECCeEEEEecccCCC--------CcEEEEe Confidence 789988888874332 2344444 No 19 >protein:vir:1272 Length: 119 # NCBI annotation: hypothetical protein # Family: family:all:116 # ACLAME annotation(s): phi:0000012 - phage head tail joining # MgeID: mge:329 # MgeName: phi-105 # Cross-refs: genbank:acc:NP_690764;genbank:gi:22855004;genbank:GeneID:955243 Probab=33.77 E-value=1.3 Score=19.90 Aligned_cols=100 Identities=19% Similarity=0.148 Sum_probs=59.2 Q ss_pred CCCcccceeEEEEEEeccC--CCCCCCCc--ccCcccccceeeccCc----eeeeccccceeeceeEEEeccccccCCCC Q lcl|NC_018848. 1 MSQVPRWLLRHRVSIEPYI--GDSAYGPR--YGPAVTGVRALVAEQV----RTVRDREGREVISTAQVITAPDTVCPAES 72 (106) Q Consensus 1 ms~ip~~~~rh~i~VE~y~--G~~a~Gp~--ygppvt~~r~~v~e~~----R~v~d~~G~evvS~a~v~~p~gt~~Pa~S 72 (106) |.|=..- |+|+|+++... -++..++. |-+- -.+.|.|..+. +....++......+.++.+---..+=+.. T Consensus 1 M~m~aG~-L~~rI~i~~~~~~~D~~G~~~~~w~~~-~~~wA~v~~~~~l~g~E~~~a~~~~~~~~~~i~iRy~~~I~~~~ 78 (119) T protein:vir:12 1 MRKKISQ-LRHRLTFQKKNETQDEEGNWNATYVDL-FTVWGAVEGAGSLGNSESMIAGALGVKTPKKITVRYRKDIKPNM 78 (119) T ss_pred CCCCccc-cCceEEEEeeeeccCCCCCeecceEeE-EEEEEEEeecCccchhheeecceeeeeeEEEEEEEeCCCCCccc Confidence 7765666 89999999873 23333333 2233 24677766531 22222333333445555544333455678 Q ss_pred ceec-----CCCcEEEEEEeeccccCCCCCCceEEEeeC Q lcl|NC_018848. 73 RITL-----PTGRRTRVLSAAPHTAPGLPVPESLEVMCE 106 (106) Q Consensus 73 rVTL-----P~Gr~trVl~~a~~D~~Gl~~P~hlei~le 106 (106) ||.- -+|+.-.+.++..-++.+ ++|+|.+| T Consensus 79 Ri~~~~~~~~~g~~y~I~~v~~~~~~~----~~l~l~c~ 113 (119) T protein:vir:12 79 RIVKRVPKDKTERVFDILDTNDPDDQE----EELEILCQ 113 (119) T ss_pred eEeeccccccCCeEEEEEecCCCccCC----eEEEEEEE Confidence 8752 478888888877655554 58999999 No 20 >protein:vir:105824 Length: 109 # NCBI annotation: gp8 # Family: family:all:6972 # MgeID: mge:1636 # MgeName: PMC # Cross-refs: genbank:acc:YP_655769;genbank:gi:109522092;genbank:GeneID:4157632 Probab=33.26 E-value=1.4 Score=19.84 Aligned_cols=97 Identities=20% Similarity=0.255 Sum_probs=57.5 Q ss_pred CCCcccceeEEEEEEeccCCCCCCC-----CcccCccccccee-eccCceeeeccccc--eeeceeEEEeccccccCCCC Q lcl|NC_018848. 1 MSQVPRWLLRHRVSIEPYIGDSAYG-----PRYGPAVTGVRAL-VAEQVRTVRDREGR--EVISTAQVITAPDTVCPAES 72 (106) Q Consensus 1 ms~ip~~~~rh~i~VE~y~G~~a~G-----p~ygppvt~~r~~-v~e~~R~v~d~~G~--evvS~a~v~~p~gt~~Pa~S 72 (106) |+-. --++++--||.|++..| |+|||-+ ++++. ++-+.|.+ |-+|. .-+.+--.|+|+|+-+---| T Consensus 1 mtfp----~~~tVT~~P~vG~~~D~LGN~vP~FGp~V-~v~a~q~APHvqv~-~t~~~te~e~~dVDL~lPp~spV~v~d 74 (109) T protein:vir:10 1 MTFP----TAYTVTHYPHVGDSTDGLGNTVPQFGAGV-SVPVIQLAPHVQVV-GTYSIVETETIDVDLYLPPGSPVKVKD 74 (109) T ss_pred Cccc----ceeeEeecccccccccccCCccccccCCC-ccceeeecCceeee-eccccceeeeEEEEeecCCCCchhhhh Confidence 6533 34578888999998876 9999998 68876 33443443 34432 22334455777776555566 Q ss_pred ceecCCCcEEEEEEeeccccC--CCCCCceEEEeeC Q lcl|NC_018848. 73 RITLPTGRRTRVLSAAPHTAP--GLPVPESLEVMCE 106 (106) Q Consensus 73 rVTLP~Gr~trVl~~a~~D~~--Gl~~P~hlei~le 106 (106) |+. -++..-.|+++.--.++ |.+ --+-..|. T Consensus 75 R~g-~~~~vfdVV~~RD~t~GFHGW~--PGlvaELr 107 (109) T protein:vir:10 75 RVG-YGSDVFDVVAVRDWNMGFHGWA--PGLVAELR 107 (109) T ss_pred hcc-cCceeEEEEEeeeccCcccccC--cceeeeee Confidence 766 57788899887643332 221 11222333 No 21 >protein:vir:102607 Length: 109 # NCBI annotation: gp8 # Family: family:all:6972 # MgeID: mge:1661 # MgeName: Llij # Cross-refs: genbank:acc:YP_655004;genbank:gi:109392194;genbank:GeneID:4157229 Probab=33.26 E-value=1.4 Score=19.84 Aligned_cols=97 Identities=20% Similarity=0.255 Sum_probs=57.5 Q ss_pred CCCcccceeEEEEEEeccCCCCCCC-----CcccCccccccee-eccCceeeeccccc--eeeceeEEEeccccccCCCC Q lcl|NC_018848. 1 MSQVPRWLLRHRVSIEPYIGDSAYG-----PRYGPAVTGVRAL-VAEQVRTVRDREGR--EVISTAQVITAPDTVCPAES 72 (106) Q Consensus 1 ms~ip~~~~rh~i~VE~y~G~~a~G-----p~ygppvt~~r~~-v~e~~R~v~d~~G~--evvS~a~v~~p~gt~~Pa~S 72 (106) |+-. --++++--||.|++..| |+|||-+ ++++. ++-+.|.+ |-+|. .-+.+--.|+|+|+-+---| T Consensus 1 mtfp----~~~tVT~~P~vG~~~D~LGN~vP~FGp~V-~v~a~q~APHvqv~-~t~~~te~e~~dVDL~lPp~spV~v~d 74 (109) T protein:vir:10 1 MTFP----TAYTVTHYPHVGDSTDGLGNTVPQFGAGV-SVPVIQLAPHVQVV-GTYSIVETETIDVDLYLPPGSPVKVKD 74 (109) T ss_pred Cccc----ceeeEeecccccccccccCCccccccCCC-ccceeeecCceeee-eccccceeeeEEEEeecCCCCchhhhh Confidence 6533 34578888999998876 9999998 68876 33443443 34432 22334455777776555566 Q ss_pred ceecCCCcEEEEEEeeccccC--CCCCCceEEEeeC Q lcl|NC_018848. 73 RITLPTGRRTRVLSAAPHTAP--GLPVPESLEVMCE 106 (106) Q Consensus 73 rVTLP~Gr~trVl~~a~~D~~--Gl~~P~hlei~le 106 (106) |+. -++..-.|+++.--.++ |.+ --+-..|. T Consensus 75 R~g-~~~~vfdVV~~RD~t~GFHGW~--PGlvaELr 107 (109) T protein:vir:10 75 RVG-YGSDVFDVVAVRDWNMGFHGWA--PGLVAELR 107 (109) T ss_pred hcc-cCceeEEEEEeeeccCcccccC--cceeeeee Confidence 766 57788899887643332 221 11222333 No 22 >protein:vir:93599 Length: 116 # NCBI annotation: putative head-tail adaptor # Family: family:all:116 # ACLAME annotation(s): phi:0000012 - phage head tail joining # MgeID: mge:157 # MgeName: phi 4795 # Cross-refs: genbank:acc:YP_001449298;genbank:gi:157166046;interpro:IPR006453;interpro:IPR013045;uniprot:Q6H9U3;genbank:GeneID:5580421 Probab=25.98 E-value=2 Score=18.94 Aligned_cols=101 Identities=16% Similarity=0.130 Sum_probs=58.0 Q ss_pred CCCcccceeEEEEEEeccCC-CCCC-CCcccC-cccccceeeccC-ceeeeccccceeeceeEEEec--cccccCCCCce Q lcl|NC_018848. 1 MSQVPRWLLRHRVSIEPYIG-DSAY-GPRYGP-AVTGVRALVAEQ-VRTVRDREGREVISTAQVITA--PDTVCPAESRI 74 (106) Q Consensus 1 ms~ip~~~~rh~i~VE~y~G-~~a~-Gp~ygp-pvt~~r~~v~e~-~R~v~d~~G~evvS~a~v~~p--~gt~~Pa~SrV 74 (106) |.+=+.- |+|+|+++...- ..++ ++..+- ++-.+.|.|... -+....+++.....+.++.+- ++..+=+..|| T Consensus 1 m~m~aG~-L~~rI~iq~~~~~~d~~G~~~~~w~~~~~~wA~v~~~sg~e~~~a~~~~~~~~~~i~iRy~~~~dI~~~~Ri 79 (116) T protein:vir:93 1 MAISAGR-LTQMISVLNPVLTRNAAGEMTEEWVSCGKIHADIRGRSSRERMQSGAEMAQAEIRIWVRGQSGREITAASRL 79 (116) T ss_pred CCcCccc-cCccEEEEeeeeccCCCCCeecceEeEEEEEEEEEecChhheeeccceeeeeeEEEEEEecCCCCCCcccEE Confidence 8777777 899999998742 1222 222221 112244444222 122223444444455555443 34456688887 Q ss_pred ec----CCCcEEEEEEeeccccCCCCCCceEEEeeC Q lcl|NC_018848. 75 TL----PTGRRTRVLSAAPHTAPGLPVPESLEVMCE 106 (106) Q Consensus 75 TL----P~Gr~trVl~~a~~D~~Gl~~P~hlei~le 106 (106) -. .+|+.-.+.++..-+..+ .+|+|.|| T Consensus 80 ~~~~~~~~g~~y~I~~v~~~~~~~----~~l~i~c~ 111 (116) T protein:vir:93 80 HVLSGPWRDRILNVVGLPVPDATG----GRLEILCR 111 (116) T ss_pred EEcCcccCCeEEEEEecCCCCCCC----cEEEEEEE Confidence 53 578888888876555444 68999999 Done!