Query lcl|NC_018452.1_cdsid_YP_006589981.1 [gene=B862_gp51] [protein=hypothetical protein] [protein_id=YP_006589981.1] [location=32551..33198] Match_columns 215 No_of_seqs 50 out of 57 Neff 5.8 Searched_HMMs 1612 Date Thu Nov 7 13:30:19 2013 Command /home/guerois/workspace/virfam/python/lib/hhsearch//hhsearch2 -i .//seq/seq_51 -d /home/guerois/workspace/virfam/python/profile_database/capsid_neck_tail.hhm -glob -cpu 7 -o .//seq/HHR/seq_51_vs_rec_db.hhr No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM 1 protein:vir:5111 Length: 234 # 100.0 5.7E-85 3.6E-88 482.4 19.1 213 1-214 1-234 (234) 2 protein:vir:823 Length: 216 # 100.0 1.9E-81 1.2E-84 463.1 19.5 206 1-215 1-211 (216) 3 protein:vir:2779 Length: 216 # 100.0 1.9E-81 1.2E-84 463.1 19.5 206 1-215 1-211 (216) 4 protein:vir:3302 Length: 216 # 100.0 1.9E-81 1.2E-84 463.1 19.5 206 1-215 1-211 (216) 5 protein:vir:105573 Length: 225 100.0 7E-76 4.4E-79 432.6 20.5 207 3-215 1-217 (225) 6 protein:vir:93692 Length: 197 100.0 5.1E-76 3.1E-79 433.4 15.3 195 1-211 1-197 (197) 7 protein:vir:8841 Length: 208 # 99.4 1.1E-14 6.5E-18 97.2 14.8 196 1-215 1-201 (208) 8 protein:vir:9964 Length: 223 # 97.5 4.4E-06 2.7E-09 50.0 11.4 175 1-215 37-222 (223) 9 protein:vir:10130 Length: 223 97.5 4.4E-06 2.7E-09 50.0 11.4 175 1-215 37-222 (223) 10 protein:vir:104383 Length: 166 96.5 0.00011 6.7E-08 42.3 10.7 151 32-215 1-165 (166) 11 protein:vir:108311 Length: 249 96.1 0.0011 6.6E-07 36.9 15.5 212 1-215 1-240 (249) 12 protein:vir:95880 Length: 236 95.1 0.0028 1.7E-06 34.6 13.2 193 1-215 1-227 (236) 13 protein:vir:351 Length: 242 # 26.3 2 0.0012 19.0 14.5 192 1-215 1-228 (242) No 1 >protein:vir:5111 Length: 234 # NCBI annotation: unknown # Family: family:all:1423 # MgeID: mge:114 # MgeName: PBC5 # Cross-refs: genbank:acc:NP_542268;genbank:gi:18071240;genbank:GeneID:929347 Probab=100.00 E-value=5.7e-85 Score=482.43 Aligned_cols=213 Identities=33% Similarity=0.559 Sum_probs=201.5 Q ss_pred CCccHHHHHHHHHHhhccccccccChHHHHHHHHHHHHHHHHhcccCCCceeEEeecCCcceeechh-----Hhhhhhhh Q lcl|NC_018452. 1 MPIAAADLIARAGEILQDEDHIRWEVPELLRWINDAARETIVRRPAARSVATVLPLAAGTRQEIPAR-----GVELLDVV 75 (215) Q Consensus 1 m~mt~~dlI~r~r~~l~D~~~~rW~~~eL~~wlNdA~~e~~~rrpda~~~~~~i~l~~G~~q~lp~~-----~~~li~v~ 75 (215) |+ |+++||+|||++|+|++||||+++||++||||||+|||++|||+++++++|.|++|++|+||++ +++||+++ T Consensus 1 m~-t~~~lI~r~~~~l~D~~~~rW~~~el~~~lNdAv~e~~l~rp~a~~~~~~i~l~~Gt~q~lP~d~~~~~~l~li~i~ 79 (234) T protein:vir:51 1 MP-KASEIMRLAGIQLLDEDHIRWPLIELADWVNEGVKAIVLAKPSASSKSAAIQLVKGTHQTLPGTIDGKATLQLIGIN 79 (234) T ss_pred Cc-cHHHHHHHHHHHhccccccccChHHHHHHHHHHHHHHHhhcCCCCccceeEeeccCCccccccccccchheehhhhh Confidence 99 9999999999999999999999999999999999999999999999999999999999999986 79999999 Q ss_pred hhhcccc--CCCcceeeecCHHHhccccCCCccCCCC---CcceeeeeeCCCCcEEEEeecCCCCeEEEEEEeeccccc- Q lcl|NC_018452. 76 RNIGADG--TTPGRIVRRVDRHLLDDQNPDWHAARPK---NVVKHFTFDERAPRIFYVYPPAVAGTKVETLHSELPPDV- 149 (215) Q Consensus 76 r~~~~~~--~~~g~~v~~vsr~~Ld~~~P~W~~~~~~---~~~~~~~~d~~~p~~f~l~P~p~~~~~v~~~~~~~P~~v- 149 (215) ||+.+++ +.+|+++++||||+||.++|+||..++. .+++||+||+++|++|||||+|+++|.|++++||+|..+ T Consensus 80 rn~~s~~~~~~~grav~~vsre~LD~~~P~W~~~tg~P~~~~v~~y~~d~~~p~~~~l~P~p~~~g~v~~~~~r~P~~v~ 159 (234) T protein:vir:51 80 RNLVSAAEPRQGLRAIRTCARDVLDAQEPNWHTASYVPFRKEVRQVIYDENLPTEFYVYPGNDGSGFVEAAFSFLPTSVK 159 (234) T ss_pred hhhccccccccCcceeeecCHHHhcccCCCccccCCCCchhhhhhhhccCCCCeEEEEeccCCCCceEEEEEEeecchhh Confidence 9998755 4579999999999999999999988764 467899999999999999999999999999999999653 Q ss_pred ----------cCCCCCCCCChhhHHHHHHHHHHhhcCccccccchHHHHHHHHHHHHHhCCcchhhhcccccccC Q lcl|NC_018452. 150 ----------KEDTDSLDMGAEYVNVLVSYICYRALSKDSEFANGTVAALHYQAFVDAVSDNNQQTTANSPNANH 214 (215) Q Consensus 150 ----------~~~~d~~~i~~~y~~~Lv~w~lyRA~skD~e~~n~~rA~~h~q~F~~~lG~k~~~d~~~~~~~d~ 214 (215) ++++++++||++||++|||||||||||||+|.+|++|||+|||+|++|||+|+++|.+.+||+.+ T Consensus 160 ~~~~~d~~~~a~~~~~~~i~~~y~~~Lvdw~lyRa~skD~e~~d~~rA~~h~q~F~~~lG~k~~~d~~~~pn~r~ 234 (234) T protein:vir:51 160 VANGADPEKIASWDIDVGLPEPYSVPLLDYVLYRCHQKDDTAADLGKATSHYQLFATAVGIKVQSEGTSNPNRRR 234 (234) T ss_pred hhhcCCccccccccccCCccchhhHHHHHHHhhhhcCccccccchHHHHHHHHHHHHHhCCcchhhhhccccccC Confidence 44556899999999999999999999999999999999999999999999999999999999999 No 2 >protein:vir:823 Length: 216 # NCBI annotation: hypothetical protein # Family: family:all:1423 # MgeID: mge:16 # MgeName: VT2-Sa # Cross-refs: genbank:acc:NP_050556;genbank:gi:9633453;genbank:GeneID:1262282 Probab=100.00 E-value=1.9e-81 Score=463.09 Aligned_cols=206 Identities=30% Similarity=0.548 Sum_probs=192.6 Q ss_pred CCccHHHHHHHHHHhhccccccccChHHHHHHHHHHHHHHHHhcccCCCceeEEeecCCcceeechhHhhhhhhhhhhcc Q lcl|NC_018452. 1 MPIAAADLIARAGEILQDEDHIRWEVPELLRWINDAARETIVRRPAARSVATVLPLAAGTRQEIPARGVELLDVVRNIGA 80 (215) Q Consensus 1 m~mt~~dlI~r~r~~l~D~~~~rW~~~eL~~wlNdA~~e~~~rrpda~~~~~~i~l~~G~~q~lp~~~~~li~v~r~~~~ 80 (215) |. |+++||+||+++|+|+.+|||+++||++||||||+|||+||||+++++++|.|++|++|.+|.++++||+++|| T Consensus 1 ~~-t~~~lI~r~~~~l~D~~~~rW~~~el~~~lNdAv~e~~l~rpda~~~~~~i~l~~Gt~q~~p~~~~~lI~v~r~--- 76 (216) T protein:vir:82 1 MT-TITEIIGRVNTQLVDPMMVRWPLQELCDYYNDAVRAVILARPDAGASLETISCVPGARQVLPDGVIQLLDVICL--- 76 (216) T ss_pred Cc-cHHHHHHHHHHhhhcccccccChHHHHHHHHHHHHHHHhhcCCCCcceeeEeccccccccccchhhhhhhhhhh--- Confidence 87 99999999999999999999999999999999999999999999999999999999999999999999999997 Q ss_pred ccCCCcceeeecCHHHhccccCCCccCCCCCcceeeeeeCCCCcEEEEeecCCCCeEEEEEEeecccccc---C-CCCCC Q lcl|NC_018452. 81 DGTTPGRIVRRVDRHLLDDQNPDWHAARPKNVVKHFTFDERAPRIFYVYPPAVAGTKVETLHSELPPDVK---E-DTDSL 156 (215) Q Consensus 81 ~~~~~g~~v~~vsr~~Ld~~~P~W~~~~~~~~~~~~~~d~~~p~~f~l~P~p~~~~~v~~~~~~~P~~v~---~-~~d~~ 156 (215) .+|+++++|||++||+++|+||..++ .|+||+||+.+||+|||||+|+++|+|++++||+|+.+. . ++.++ T Consensus 77 ---~~g~a~~~vsre~LD~~~P~W~~~~g--~p~~~i~de~~pr~f~l~P~p~~~~~vel~~~r~P~a~~~~~~~dd~~~ 151 (216) T protein:vir:82 77 ---SDGSAVRPLSREVLDAQYPEWPTMKG--IPECFISNDLSPRVFWLFPAPDKEISIDAVVSRIPEAVYVLTQDDDTPV 151 (216) T ss_pred ---CCCCceeeecHHHhcccCCCcCCCCC--CceEEEecCCCceEEEEeccCCCCcEEEEEEEecCcchhhccCCCCCCC Confidence 36899999999999999999998755 499999999999999999999999999999999998543 2 33357 Q ss_pred CCChhhHHHHHHHHHHhhcCcccc-ccchHHHHHHHHHHHHHhCCcchhhhcccccccCC Q lcl|NC_018452. 157 DMGAEYVNVLVSYICYRALSKDSE-FANGTVAALHYQAFVDAVSDNNQQTTANSPNANHV 215 (215) Q Consensus 157 ~i~~~y~~~Lv~w~lyRA~skD~e-~~n~~rA~~h~q~F~~~lG~k~~~d~~~~~~~d~~ 215 (215) +||++||++|||||||||||||++ ++|++||++|||+|++|||+|+++|+++..|.++- T Consensus 152 ~i~~~y~~~Lvdw~lyRa~skd~~~~~d~~rA~~h~q~F~~~lG~k~~ad~~~~~r~~~~ 211 (216) T protein:vir:82 152 PLEEAYVNPLVEWMLFRAFSKDAAGGAESGLAAQHYQSFVEQLGIKQGADSALYARKKVF 211 (216) T ss_pred CcchhhhHHHHHHHHHHHhcCcCccccChHHHHHHHHHHHHHhCCchHHHhHHHHHHhhc Confidence 899999999999999999999887 58999999999999999999999999888877655 No 3 >protein:vir:2779 Length: 216 # NCBI annotation: hypothetical protein # Family: family:all:1423 # MgeID: mge:59 # MgeName: Stx2 converting bacteriophage I # Cross-refs: genbank:acc:NP_612896;genbank:gi:20065813;genbank:GeneID:935638 Probab=100.00 E-value=1.9e-81 Score=463.09 Aligned_cols=206 Identities=30% Similarity=0.548 Sum_probs=192.6 Q ss_pred CCccHHHHHHHHHHhhccccccccChHHHHHHHHHHHHHHHHhcccCCCceeEEeecCCcceeechhHhhhhhhhhhhcc Q lcl|NC_018452. 1 MPIAAADLIARAGEILQDEDHIRWEVPELLRWINDAARETIVRRPAARSVATVLPLAAGTRQEIPARGVELLDVVRNIGA 80 (215) Q Consensus 1 m~mt~~dlI~r~r~~l~D~~~~rW~~~eL~~wlNdA~~e~~~rrpda~~~~~~i~l~~G~~q~lp~~~~~li~v~r~~~~ 80 (215) |. |+++||+||+++|+|+.+|||+++||++||||||+|||+||||+++++++|.|++|++|.+|.++++||+++|| T Consensus 1 ~~-t~~~lI~r~~~~l~D~~~~rW~~~el~~~lNdAv~e~~l~rpda~~~~~~i~l~~Gt~q~~p~~~~~lI~v~r~--- 76 (216) T protein:vir:27 1 MT-TITEIIGRVNTQLVDPMMVRWPLQELCDYYNDAVRAVILARPDAGASLETISCVPGARQVLPDGVIQLLDVICL--- 76 (216) T ss_pred Cc-cHHHHHHHHHHhhhcccccccChHHHHHHHHHHHHHHHhhcCCCCcceeeEeccccccccccchhhhhhhhhhh--- Confidence 87 99999999999999999999999999999999999999999999999999999999999999999999999997 Q ss_pred ccCCCcceeeecCHHHhccccCCCccCCCCCcceeeeeeCCCCcEEEEeecCCCCeEEEEEEeecccccc---C-CCCCC Q lcl|NC_018452. 81 DGTTPGRIVRRVDRHLLDDQNPDWHAARPKNVVKHFTFDERAPRIFYVYPPAVAGTKVETLHSELPPDVK---E-DTDSL 156 (215) Q Consensus 81 ~~~~~g~~v~~vsr~~Ld~~~P~W~~~~~~~~~~~~~~d~~~p~~f~l~P~p~~~~~v~~~~~~~P~~v~---~-~~d~~ 156 (215) .+|+++++|||++||+++|+||..++ .|+||+||+.+||+|||||+|+++|+|++++||+|+.+. . ++.++ T Consensus 77 ---~~g~a~~~vsre~LD~~~P~W~~~~g--~p~~~i~de~~pr~f~l~P~p~~~~~vel~~~r~P~a~~~~~~~dd~~~ 151 (216) T protein:vir:27 77 ---SDGSAVRPLSREVLDAQYPEWPTMKG--IPECFISNDLSPRVFWLFPAPDKEISIDAVVSRIPEAVYVLTQDDDTPV 151 (216) T ss_pred ---CCCCceeeecHHHhcccCCCcCCCCC--CceEEEecCCCceEEEEeccCCCCcEEEEEEEecCcchhhccCCCCCCC Confidence 36899999999999999999998755 499999999999999999999999999999999998543 2 33357 Q ss_pred CCChhhHHHHHHHHHHhhcCcccc-ccchHHHHHHHHHHHHHhCCcchhhhcccccccCC Q lcl|NC_018452. 157 DMGAEYVNVLVSYICYRALSKDSE-FANGTVAALHYQAFVDAVSDNNQQTTANSPNANHV 215 (215) Q Consensus 157 ~i~~~y~~~Lv~w~lyRA~skD~e-~~n~~rA~~h~q~F~~~lG~k~~~d~~~~~~~d~~ 215 (215) +||++||++|||||||||||||++ ++|++||++|||+|++|||+|+++|+++..|.++- T Consensus 152 ~i~~~y~~~Lvdw~lyRa~skd~~~~~d~~rA~~h~q~F~~~lG~k~~ad~~~~~r~~~~ 211 (216) T protein:vir:27 152 PLEEAYVNPLVEWMLFRAFSKDAAGGAESGLAAQHYQSFVEQLGIKQGADSALYARKKVF 211 (216) T ss_pred CcchhhhHHHHHHHHHHHhcCcCccccChHHHHHHHHHHHHHhCCchHHHhHHHHHHhhc Confidence 899999999999999999999887 58999999999999999999999999888877655 No 4 >protein:vir:3302 Length: 216 # NCBI annotation: hypothetical protein # Family: family:all:1423 # MgeID: mge:66 # MgeName: 933W # Cross-refs: genbank:acc:NP_049518;genbank:gi:9632524;genbank:GeneID:1262013 Probab=100.00 E-value=1.9e-81 Score=463.09 Aligned_cols=206 Identities=30% Similarity=0.548 Sum_probs=192.6 Q ss_pred CCccHHHHHHHHHHhhccccccccChHHHHHHHHHHHHHHHHhcccCCCceeEEeecCCcceeechhHhhhhhhhhhhcc Q lcl|NC_018452. 1 MPIAAADLIARAGEILQDEDHIRWEVPELLRWINDAARETIVRRPAARSVATVLPLAAGTRQEIPARGVELLDVVRNIGA 80 (215) Q Consensus 1 m~mt~~dlI~r~r~~l~D~~~~rW~~~eL~~wlNdA~~e~~~rrpda~~~~~~i~l~~G~~q~lp~~~~~li~v~r~~~~ 80 (215) |. |+++||+||+++|+|+.+|||+++||++||||||+|||+||||+++++++|.|++|++|.+|.++++||+++|| T Consensus 1 ~~-t~~~lI~r~~~~l~D~~~~rW~~~el~~~lNdAv~e~~l~rpda~~~~~~i~l~~Gt~q~~p~~~~~lI~v~r~--- 76 (216) T protein:vir:33 1 MT-TITEIIGRVNTQLVDPMMVRWPLQELCDYYNDAVRAVILARPDAGASLETISCVPGARQVLPDGVIQLLDVICL--- 76 (216) T ss_pred Cc-cHHHHHHHHHHhhhcccccccChHHHHHHHHHHHHHHHhhcCCCCcceeeEeccccccccccchhhhhhhhhhh--- Confidence 87 99999999999999999999999999999999999999999999999999999999999999999999999997 Q ss_pred ccCCCcceeeecCHHHhccccCCCccCCCCCcceeeeeeCCCCcEEEEeecCCCCeEEEEEEeecccccc---C-CCCCC Q lcl|NC_018452. 81 DGTTPGRIVRRVDRHLLDDQNPDWHAARPKNVVKHFTFDERAPRIFYVYPPAVAGTKVETLHSELPPDVK---E-DTDSL 156 (215) Q Consensus 81 ~~~~~g~~v~~vsr~~Ld~~~P~W~~~~~~~~~~~~~~d~~~p~~f~l~P~p~~~~~v~~~~~~~P~~v~---~-~~d~~ 156 (215) .+|+++++|||++||+++|+||..++ .|+||+||+.+||+|||||+|+++|+|++++||+|+.+. . ++.++ T Consensus 77 ---~~g~a~~~vsre~LD~~~P~W~~~~g--~p~~~i~de~~pr~f~l~P~p~~~~~vel~~~r~P~a~~~~~~~dd~~~ 151 (216) T protein:vir:33 77 ---SDGSAVRPLSREVLDAQYPEWPTMKG--IPECFISNDLSPRVFWLFPAPDKEISIDAVVSRIPEAVYVLTQDDDTPV 151 (216) T ss_pred ---CCCCceeeecHHHhcccCCCcCCCCC--CceEEEecCCCceEEEEeccCCCCcEEEEEEEecCcchhhccCCCCCCC Confidence 36899999999999999999998755 499999999999999999999999999999999998543 2 33357 Q ss_pred CCChhhHHHHHHHHHHhhcCcccc-ccchHHHHHHHHHHHHHhCCcchhhhcccccccCC Q lcl|NC_018452. 157 DMGAEYVNVLVSYICYRALSKDSE-FANGTVAALHYQAFVDAVSDNNQQTTANSPNANHV 215 (215) Q Consensus 157 ~i~~~y~~~Lv~w~lyRA~skD~e-~~n~~rA~~h~q~F~~~lG~k~~~d~~~~~~~d~~ 215 (215) +||++||++|||||||||||||++ ++|++||++|||+|++|||+|+++|+++..|.++- T Consensus 152 ~i~~~y~~~Lvdw~lyRa~skd~~~~~d~~rA~~h~q~F~~~lG~k~~ad~~~~~r~~~~ 211 (216) T protein:vir:33 152 PLEEAYVNPLVEWMLFRAFSKDAAGGAESGLAAQHYQSFVEQLGIKQGADSALYARKKVF 211 (216) T ss_pred CcchhhhHHHHHHHHHHHhcCcCccccChHHHHHHHHHHHHHhCCchHHHhHHHHHHhhc Confidence 899999999999999999999887 58999999999999999999999999888877655 No 5 >protein:vir:105573 Length: 225 # NCBI annotation: hypothetical protein # Family: family:all:1423 # MgeID: mge:1540 # MgeName: F116 # Cross-refs: genbank:acc:YP_164310;genbank:gi:56692957;genbank:GeneID:3197184 Probab=100.00 E-value=7e-76 Score=432.60 Aligned_cols=207 Identities=21% Similarity=0.210 Sum_probs=192.3 Q ss_pred ccHHHHHHHHHHhhccc-cccccChHHHHHHHHHHHHHHHHh----cccCCCceeEEeecCCcceeechhHhhhhhhhhh Q lcl|NC_018452. 3 IAAADLIARAGEILQDE-DHIRWEVPELLRWINDAARETIVR----RPAARSVATVLPLAAGTRQEIPARGVELLDVVRN 77 (215) Q Consensus 3 mt~~dlI~r~r~~l~D~-~~~rW~~~eL~~wlNdA~~e~~~r----rpda~~~~~~i~l~~G~~q~lp~~~~~li~v~r~ 77 (215) ||+++||+|||++|+|+ +||||+++||++|||||++|||+| |||+++++++|.|++|+.|.+|.+++++|++++| T Consensus 1 m~~~~lI~r~~~~l~D~~~~~rW~~~el~~~lNdAv~e~~~r~rL~rpda~~~~~~i~l~~Gt~q~~~~~~~~~I~~~~~ 80 (225) T protein:vir:10 1 MTLADLIRRVRTDANDMVEPYFWSDQDVADWLNDAVREAAVRGRLIHESQADAVCRIEVVAGTAVYQLHASLYELSHLGF 80 (225) T ss_pred CCHHHHHHHHHHHhccccccccCChHHHHHHHHHHHHHHHHhcccccccCCCceeeeeecCccccccCchHHHHHHHHhh Confidence 99999999999999996 799999999999999999999988 9999999999999999999999999999999999 Q ss_pred hccccCCCcceeeecCHHHhccccCCCccCCCCCcceeeeeeCCCCcEEEEeecCCCCeEEEEEEeecccccc----CCC Q lcl|NC_018452. 78 IGADGTTPGRIVRRVDRHLLDDQNPDWHAARPKNVVKHFTFDERAPRIFYVYPPAVAGTKVETLHSELPPDVK----EDT 153 (215) Q Consensus 78 ~~~~~~~~g~~v~~vsr~~Ld~~~P~W~~~~~~~~~~~~~~d~~~p~~f~l~P~p~~~~~v~~~~~~~P~~v~----~~~ 153 (215) +++++.. +++++++|+|+||.++|+||+.++ .|++|++| +++|||||+|+++|+|+|++|++|+.+. +++ T Consensus 81 ~~~~~~~-~~~~~~~s~e~LD~~~P~W~~~tg--~p~~~~~d---~~~~~l~P~p~~~~~vel~~~r~P~~~~~~~~~D~ 154 (225) T protein:vir:10 81 YPADMSR-PTMPVLKSAEVLDVELPEWRACTG--KPLYAIQG---DTSLRLVPTPDRAGILRVEGYRTPLADMALADKDT 154 (225) T ss_pred cCcccCC-ceecccccHHHhcccCCCcccCCC--CceEEEeC---CcEEEEEecCCCceEEEEEEEeecchhhhcccccc Confidence 9888765 689999999999999999997755 58888774 5689999999999999999999998644 344 Q ss_pred CCCCCChhhHHHHHHHHHHhhcCccc-cccchHHHHHHHHHHHHHhCCcchhhhcccccccCC Q lcl|NC_018452. 154 DSLDMGAEYVNVLVSYICYRALSKDS-EFANGTVAALHYQAFVDAVSDNNQQTTANSPNANHV 215 (215) Q Consensus 154 d~~~i~~~y~~~Lv~w~lyRA~skD~-e~~n~~rA~~h~q~F~~~lG~k~~~d~~~~~~~d~~ 215 (215) +.|+||++||++|+|||||||||||+ +++|++||++|||+|++|||+|+++|+++++|+|.. T Consensus 155 ~~p~i~~~y~~~Lvdw~lyRa~skd~~~~~d~~rA~~h~q~F~~alG~k~~ad~~r~~r~~~p 217 (225) T protein:vir:10 155 AQPEIHAEHHRHLVQWALYRGFSIPDMESFDPNRAALAEAAFTAYFGERPDSDLRRITREDVP 217 (225) T ss_pred ccCccchhhHHHHHHHHHHHHhcCcCccccChHHHHHHHHHHHHHhCCchhHHHHHhccccCc Confidence 57889999999999999999999975 578999999999999999999999999999999988 No 6 >protein:vir:93692 Length: 197 # NCBI annotation: Bcep22gp58 # Family: family:all:1423 # MgeID: mge:1470 # MgeName: Bcep22 # Cross-refs: genbank:acc:NP_944287;genbank:gi:38640364;genbank:GeneID:2658345 Probab=100.00 E-value=5.1e-76 Score=433.38 Aligned_cols=195 Identities=77% Similarity=1.158 Sum_probs=181.0 Q ss_pred CCccHHHHHHHHHHhhccccccccChHHHHHHHHHHHHHHHHhcccCCCceeEEeecCCcceeechhHhhhhhhhhhhcc Q lcl|NC_018452. 1 MPIAAADLIARAGEILQDEDHIRWEVPELLRWINDAARETIVRRPAARSVATVLPLAAGTRQEIPARGVELLDVVRNIGA 80 (215) Q Consensus 1 m~mt~~dlI~r~r~~l~D~~~~rW~~~eL~~wlNdA~~e~~~rrpda~~~~~~i~l~~G~~q~lp~~~~~li~v~r~~~~ 80 (215) ||||++|||+|||++|+|+++|||+++||+|||||||+|||+||||+++++++|.|++|++|+||.++++||+++||+++ T Consensus 1 M~~t~~~lI~r~~~~L~D~~~~rW~~~el~dwlNdAv~ei~l~rPda~~~~~~i~l~aGt~q~LP~~~~~Li~vvrn~~~ 80 (197) T protein:vir:93 1 MPIAATDLIARAGNVLQDEDHIRWEVPELIEWINDAARETIVRRPAARSVAAVLELAAGTRQAIPERGVELLDVVRNMGA 80 (197) T ss_pred CcccHHHHHHHHHHhhccccccccCcHHHHHHHHHHHHHHHhhCCCCCcceeEEeeccCcccccchhHHHHHHHHHhhhh Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred ccCCCcceeeecCHHHhccccCCCccCCCCCcceeeeeeCCCCcEEEEeecCCCCeEEEEEEeeccccccCCCCCCCCCh Q lcl|NC_018452. 81 DGTTPGRIVRRVDRHLLDDQNPDWHAARPKNVVKHFTFDERAPRIFYVYPPAVAGTKVETLHSELPPDVKEDTDSLDMGA 160 (215) Q Consensus 81 ~~~~~g~~v~~vsr~~Ld~~~P~W~~~~~~~~~~~~~~d~~~p~~f~l~P~p~~~~~v~~~~~~~P~~v~~~~d~~~i~~ 160 (215) .+.++||+|++||||+||+++|+||+++++++|+||+||+++|++|||||+|+++|.|++++|++|+.+.+++++++||+ T Consensus 81 ~~~~~gr~vr~vsre~LD~~~P~W~~~~~~~~v~~y~~~e~~p~~~~vyP~p~~~~~ve~~~~r~P~~v~~~~~~~~ipe 160 (197) T protein:vir:93 81 DGVTPGRIVRRVDRQLLDDQNPDWHAARAKNVVKHFTFDERAPRIFYVYPPAVAGTKVETLHSELPPAIAASGDTLDMGA 160 (197) T ss_pred cccCCCcccccccHHHhcccCCCCccCCCCCceEEEEeecCCCcEEEEeecCCCCceEEEEEeeCChhhhccCCCCCCch Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred hhHHHHHH-HHHHhhcCccccc-cchHHHHHHHHHHHHHhCCcchhhhccccc Q lcl|NC_018452. 161 EYVNVLVS-YICYRALSKDSEF-ANGTVAALHYQAFVDAVSDNNQQTTANSPN 211 (215) Q Consensus 161 ~y~~~Lv~-w~lyRA~skD~e~-~n~~rA~~h~q~F~~~lG~k~~~d~~~~~~ 211 (215) +|+++||| ||||||||||+++ +|+---. ++ +.|+- T Consensus 161 iy~~~lv~~~~lyRa~sKd~~~~a~a~~~~-----------~~-----~~~~~ 197 (197) T protein:vir:93 161 EYMNVLVSTSATARCRRTASSRTARSPPCT-----------IR-----RSSTP 197 (197) T ss_pred hhhhhhHHhhhhhhhcCCCCCCcccCCccc-----------cc-----cCCCC Confidence 99999998 9999999999885 4432111 11 01111 No 7 >protein:vir:8841 Length: 208 # NCBI annotation: constituent protein # Family: family:all:6621 # MgeID: mge:158 # MgeName: PaP3 # Cross-refs: genbank:acc:NP_775249;genbank:gi:27476047;genbank:GeneID:2700595 Probab=99.41 E-value=1.1e-14 Score=97.21 Aligned_cols=196 Identities=16% Similarity=0.178 Sum_probs=137.5 Q ss_pred CC--ccHHHHHHHHHHhhccccccccChHHHHHHHHHHHHHH--HHhcccCCCceeEEeecCCcceeechhHhhhhhhhh Q lcl|NC_018452. 1 MP--IAAADLIARAGEILQDEDHIRWEVPELLRWINDAARET--IVRRPAARSVATVLPLAAGTRQEIPARGVELLDVVR 76 (215) Q Consensus 1 m~--mt~~dlI~r~r~~l~D~~~~rW~~~eL~~wlNdA~~e~--~~rrpda~~~~~~i~l~~G~~q~lp~~~~~li~v~r 76 (215) || .+-++|...+..-++=.+- +.+-+-+||+-|..++ .+|.|... +..++.+..|+. .||++.++++.|.. T Consensus 1 ~~~i~~Y~~L~~~~~~~l~R~Dl---t~~~~p~FI~lAE~~inr~Lr~~~~e-~~vtl~~~~g~~-~LP~Df~e~r~i~~ 75 (208) T protein:vir:88 1 MATINNVTDLAIAAIQWSDRQDL---TQELLMLFIGNTTDRLNRLLRVRENE-HFETLMAFGGGI-EIPEHFVALRSITG 75 (208) T ss_pred CCCcCCHHHHHHHHHHhhccccc---hhhhhhHHHHHHHHHHHHHhcccccc-eEEEEEecCcee-eCChhHHHHHHHhh Confidence 66 2556777776655543221 1233789999999998 77777774 466677777755 79999988887754 Q ss_pred hhccccCCCcceeeecCHHHhccccCCCccCCCCCcceeeeeeCCCCcEEEEeecCCCCeEEEEEEeeccccccCCCCCC Q lcl|NC_018452. 77 NIGADGTTPGRIVRRVDRHLLDDQNPDWHAARPKNVVKHFTFDERAPRIFYVYPPAVAGTKVETLHSELPPDVKEDTDSL 156 (215) Q Consensus 77 ~~~~~~~~~g~~v~~vsr~~Ld~~~P~W~~~~~~~~~~~~~~d~~~p~~f~l~P~p~~~~~v~~~~~~~P~~v~~~~d~~ 156 (215) +++++|+.++.++.+.|+. +.+|+..+++ |.+|..-. ..++++|.|+++..+++.||....++..+.++ T Consensus 76 ----~~~~~g~~l~~v~~~~~~~-~~~~~~~~g~--p~~yti~g---~~i~~~P~p~~~~~~~i~Yy~~iP~LS~~n~t- 144 (208) T protein:vir:88 76 ----DALIGGRTLQYITQDIFSH-YVNYNYQPQG--VTYYTRLG---NFWRVYPVVPDGAPFIVNYWTVLPELSLDNPT- 144 (208) T ss_pred ----cCCCCCceecccCHHHhhh-hhhhccCccc--cceEEEEc---CeEEEeeecCCCceEEEEeeeccCCCCCCCch- Confidence 5567899999999999987 6799876554 66777743 35899999999999999999976666555554 Q ss_pred CCChhhHHHHHHHHHHhhcCccccc-cchHHHHHHHHHHHHHhCCcchhhhcccccccCC Q lcl|NC_018452. 157 DMGAEYVNVLVSYICYRALSKDSEF-ANGTVAALHYQAFVDAVSDNNQQTTANSPNANHV 215 (215) Q Consensus 157 ~i~~~y~~~Lv~w~lyRA~skD~e~-~n~~rA~~h~q~F~~~lG~k~~~d~~~~~~~d~~ 215 (215) +-..+++ =|-.||.++-...-+ -|.+|++.|.|+|.+++|.....|.+.--..-.. T Consensus 145 --NwLl~~a-PD~YLy~~L~ea~~f~~D~~ra~~~~~~~~~al~~L~~~d~~~~~~~~~l 201 (208) T protein:vir:88 145 --TWALTKY-PQIYLYGVLEQIYLYTMDEERSMFWGQKLERAVMELQNEENAADFASSRL 201 (208) T ss_pred --hHHhhcc-hhHHHHHHHHHHHhcccCHhHHHHHHHHHHHHHHHHHhhhhhHHhcCCce Confidence 2333322 333445555443333 3677999999999999999888876543332222 No 8 >protein:vir:9964 Length: 223 # NCBI annotation: hypothetical protein # Family: family:all:2410 # MgeID: mge:179 # MgeName: Stx1 converting bacteriophage # Cross-refs: genbank:acc:NP_859094;genbank:gi:32170849;genbank:GeneID:2653173 Probab=97.53 E-value=4.4e-06 Score=49.96 Aligned_cols=175 Identities=11% Similarity=0.066 Sum_probs=104.6 Q ss_pred CCccHHHHHHHHHHhhccccccccChHHHHHHHHHHHHHHHHhcccCCCceeEEeecCCc-ceee-chhHhhhhhhhhhh Q lcl|NC_018452. 1 MPIAAADLIARAGEILQDEDHIRWEVPELLRWINDAARETIVRRPAARSVATVLPLAAGT-RQEI-PARGVELLDVVRNI 78 (215) Q Consensus 1 m~mt~~dlI~r~r~~l~D~~~~rW~~~eL~~wlNdA~~e~~~rrpda~~~~~~i~l~~G~-~q~l-p~~~~~li~v~r~~ 78 (215) |. +++|++-.+|....-. .+.-+.+-|+.|-.|.|..-+.-. .+.++...+|. .+.+ +.....+..+.+ + T Consensus 37 Mv-~~d~fLP~Vr~~vp~~-----l~~~~~~aLr~AAieFCReS~~~R-~t~~~~~~~~~~~~~~~~~~~~~~~rI~~-v 108 (223) T protein:vir:99 37 MA-ELSDFLPYVRRHISGP-----LNIMMTDALSMAAVAFSRQSLVCR-REVTVVPVAGKEIVLPYDKDDEECVHIIR-I 108 (223) T ss_pred hc-cHHHHHHHHhhhCCCc-----hhHHHHHHHHHHHHHHHhhcccee-ecccccCCCCcceEEeeccccccceeeEE-e Confidence 77 8888888888776553 244577889999999997754332 34445444443 3332 112222222221 1 Q ss_pred ccccCCCcceeeecCHHHhccccCCCccCCCCCcceeeeeeCCCCcEEEEeecCCCCeEEEEEEeeccccccCCCCCCCC Q lcl|NC_018452. 79 GADGTTPGRIVRRVDRHLLDDQNPDWHAARPKNVVKHFTFDERAPRIFYVYPPAVAGTKVETLHSELPPDVKEDTDSLDM 158 (215) Q Consensus 79 ~~~~~~~g~~v~~vsr~~Ld~~~P~W~~~~~~~~~~~~~~d~~~p~~f~l~P~p~~~~~v~~~~~~~P~~v~~~~d~~~i 158 (215) . .+|+.+. .+. . |+...++.+.++|.+ |+|++-+.-.|...+..=.+ .+ T Consensus 109 ~----~~g~~L~-----------------~G~--~----~t~~s~d~l~l~~~~---~tl~V~~alkPs~~a~~lPD-~L 157 (223) T protein:vir:99 109 S----DDNHELF-----------------VGR--D----VDISSGRSLRFACSP---GEVSVLYAVAPKAGRSQIPD-EL 157 (223) T ss_pred e----cCCeeee-----------------ccc--c----eeecCCceEEEEeCC---CeEEEEEEeccCcchhhhhH-HH Confidence 1 1343322 122 1 555666789999976 67888888888643321111 23 Q ss_pred ChhhHHHHHHHHHHhhcC-ccccccchHHHHHHHHHHHHHh--CCcchhhh------cccccccCC Q lcl|NC_018452. 159 GAEYVNVLVSYICYRALS-KDSEFANGTVAALHYQAFVDAV--SDNNQQTT------ANSPNANHV 215 (215) Q Consensus 159 ~~~y~~~Lv~w~lyRA~s-kD~e~~n~~rA~~h~q~F~~~l--G~k~~~d~------~~~~~~d~~ 215 (215) - .|+.+|-+=++.|-|+ +|.+-.||++|+.|.|.|.+.+ .-+...|. ++..|.-.. T Consensus 158 ~-dy~eaI~~GA~arLlmmP~kpWsNP~lA~y~~~~F~eg~r~Akr~ale~~~~~~~~nP~R~~~F 222 (223) T protein:vir:99 158 L-TWPEEVAAGALERLFMQTGVSWSDPLRAQYFSVQFSEGIRRAYRHTLATSPYSSYRNPVRRQRF 222 (223) T ss_pred H-HHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHHHHHHHHhhcCccccCCCcccccc Confidence 3 4999988889999999 7999999999999999998766 22222221 122222222 No 9 >protein:vir:10130 Length: 223 # NCBI annotation: hypothetical protein # Family: family:all:2410 # MgeID: mge:180 # MgeName: Stx2 converting bacteriophage II # Cross-refs: genbank:acc:NP_859260;genbank:gi:32171016;genbank:GeneID:2653415 Probab=97.53 E-value=4.4e-06 Score=49.96 Aligned_cols=175 Identities=11% Similarity=0.066 Sum_probs=104.6 Q ss_pred CCccHHHHHHHHHHhhccccccccChHHHHHHHHHHHHHHHHhcccCCCceeEEeecCCc-ceee-chhHhhhhhhhhhh Q lcl|NC_018452. 1 MPIAAADLIARAGEILQDEDHIRWEVPELLRWINDAARETIVRRPAARSVATVLPLAAGT-RQEI-PARGVELLDVVRNI 78 (215) Q Consensus 1 m~mt~~dlI~r~r~~l~D~~~~rW~~~eL~~wlNdA~~e~~~rrpda~~~~~~i~l~~G~-~q~l-p~~~~~li~v~r~~ 78 (215) |. +++|++-.+|....-. .+.-+.+-|+.|-.|.|..-+.-. .+.++...+|. .+.+ +.....+..+.+ + T Consensus 37 Mv-~~d~fLP~Vr~~vp~~-----l~~~~~~aLr~AAieFCReS~~~R-~t~~~~~~~~~~~~~~~~~~~~~~~rI~~-v 108 (223) T protein:vir:10 37 MA-ELSDFLPYVRRHISGP-----LNIMMTDALSMAAVAFSRQSLVCR-REVTVVPVAGKEIVLPYDKDDEECVHIIR-I 108 (223) T ss_pred hc-cHHHHHHHHhhhCCCc-----hhHHHHHHHHHHHHHHHhhcccee-ecccccCCCCcceEEeeccccccceeeEE-e Confidence 77 8888888888776553 244577889999999997754332 34445444443 3332 112222222221 1 Q ss_pred ccccCCCcceeeecCHHHhccccCCCccCCCCCcceeeeeeCCCCcEEEEeecCCCCeEEEEEEeeccccccCCCCCCCC Q lcl|NC_018452. 79 GADGTTPGRIVRRVDRHLLDDQNPDWHAARPKNVVKHFTFDERAPRIFYVYPPAVAGTKVETLHSELPPDVKEDTDSLDM 158 (215) Q Consensus 79 ~~~~~~~g~~v~~vsr~~Ld~~~P~W~~~~~~~~~~~~~~d~~~p~~f~l~P~p~~~~~v~~~~~~~P~~v~~~~d~~~i 158 (215) . .+|+.+. .+. . |+...++.+.++|.+ |+|++-+.-.|...+..=.+ .+ T Consensus 109 ~----~~g~~L~-----------------~G~--~----~t~~s~d~l~l~~~~---~tl~V~~alkPs~~a~~lPD-~L 157 (223) T protein:vir:10 109 S----DDNHELF-----------------VGR--D----VDISSGRSLRFACSP---GEVSVLYAVAPKAGRSQIPD-EL 157 (223) T ss_pred e----cCCeeee-----------------ccc--c----eeecCCceEEEEeCC---CeEEEEEEeccCcchhhhhH-HH Confidence 1 1343322 122 1 555666789999976 67888888888643321111 23 Q ss_pred ChhhHHHHHHHHHHhhcC-ccccccchHHHHHHHHHHHHHh--CCcchhhh------cccccccCC Q lcl|NC_018452. 159 GAEYVNVLVSYICYRALS-KDSEFANGTVAALHYQAFVDAV--SDNNQQTT------ANSPNANHV 215 (215) Q Consensus 159 ~~~y~~~Lv~w~lyRA~s-kD~e~~n~~rA~~h~q~F~~~l--G~k~~~d~------~~~~~~d~~ 215 (215) - .|+.+|-+=++.|-|+ +|.+-.||++|+.|.|.|.+.+ .-+...|. ++..|.-.. T Consensus 158 ~-dy~eaI~~GA~arLlmmP~kpWsNP~lA~y~~~~F~eg~r~Akr~ale~~~~~~~~nP~R~~~F 222 (223) T protein:vir:10 158 L-TWPEEVAAGALERLFMQTGVSWSDPLRAQYFSVQFSEGIRRAYRHTLATSPYSSYRNPVRRQRF 222 (223) T ss_pred H-HHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHHHHHHHHhhcCccccCCCcccccc Confidence 3 4999988889999999 7999999999999999998766 22222221 122222222 No 10 >protein:vir:104383 Length: 166 # NCBI annotation: hypothetical protein # Family: family:all:2410 # MgeID: mge:1471 # MgeName: 86 # Cross-refs: genbank:acc:YP_794066;genbank:gi:116222011;genbank:GeneID:4397445 Probab=96.52 E-value=0.00011 Score=42.34 Aligned_cols=151 Identities=12% Similarity=0.104 Sum_probs=82.4 Q ss_pred HHHHHHHHHHHh--cc-cCCCceeEEeecC-Ccceeech-hHhhhhhhhhhhccccCCCcceeeecCHHHhccccCCCcc Q lcl|NC_018452. 32 WINDAARETIVR--RP-AARSVATVLPLAA-GTRQEIPA-RGVELLDVVRNIGADGTTPGRIVRRVDRHLLDDQNPDWHA 106 (215) Q Consensus 32 wlNdA~~e~~~r--rp-da~~~~~~i~l~~-G~~q~lp~-~~~~li~v~r~~~~~~~~~g~~v~~vsr~~Ld~~~P~W~~ 106 (215) -+-+|++++++. |. .+-..+.++.+.+ ++...++. .-+++..+.+ +. .+|+++ | T Consensus 1 ~m~~Al~~AaieFCreS~~~r~t~t~~~~~~~~~v~~~~~~d~~~~~i~~-v~----~~~~~L--------------~-- 59 (166) T protein:vir:10 1 MMTDALSMAAVAFSRQSLVCRREVTVVPVAGKEIVLPYDKDDEECVHIIR-IS----DDNHEL--------------F-- 59 (166) T ss_pred ChHHHHHHHHHHHHhhccceeeeecccccCCcceEEecCCccceeeeEEe-ee----cCCcee--------------e-- Confidence 555666666555 22 1122234443333 33332222 1111111111 00 112221 1 Q ss_pred CCCCCcceeeeeeCCCCcEEEEeecCCCCeEEEEEEeeccccccCCCCCCCCChhhHHHHHHHHHHhhcC-ccccccchH Q lcl|NC_018452. 107 ARPKNVVKHFTFDERAPRIFYVYPPAVAGTKVETLHSELPPDVKEDTDSLDMGAEYVNVLVSYICYRALS-KDSEFANGT 185 (215) Q Consensus 107 ~~~~~~~~~~~~d~~~p~~f~l~P~p~~~~~v~~~~~~~P~~v~~~~d~~~i~~~y~~~Lv~w~lyRA~s-kD~e~~n~~ 185 (215) ++.+ |+...++++.++|.| ++|++-++..|..-+..=.+ .+- .|..+|..=++.|.|+ +|.+-.||+ T Consensus 60 -~g~~------~~~~s~~~L~~~~~~---~~l~V~~a~~Ps~~a~~lPd-~L~-dy~~aI~~GA~~~L~mmP~k~WsnP~ 127 (166) T protein:vir:10 60 -VGRD------VDISSGRSLRFACSP---GEVSVLYAVAPKAGRSQIPD-ELL-TWPEEVAAGALERLFMQTGVSWSDPL 127 (166) T ss_pred -cccc------ceecCCcEEEEecCC---CEEEEEEEeccCCCCcccch-HHh-hHHHHHHHHHHHHHHhCCCCCCCChh Confidence 1221 555677899999999 46888888888743321111 233 4999988889999999 899999999 Q ss_pred HHHHHHHHHHHHh--CCcchhhhc------ccccccCC Q lcl|NC_018452. 186 VAALHYQAFVDAV--SDNNQQTTA------NSPNANHV 215 (215) Q Consensus 186 rA~~h~q~F~~~l--G~k~~~d~~------~~~~~d~~ 215 (215) +|+.|.|.|.+.+ .-+...|.+ +..|.-.. T Consensus 128 la~y~~~~F~eg~r~A~r~a~e~~~~~~~~nP~R~~~F 165 (166) T protein:vir:10 128 RAQYFSVQFSEGIRRAYRHTLATSPYSSYRNPARRQRF 165 (166) T ss_pred hhHHHHHHHHHHHHHHHHHhhhhcCccccCCCcccccc Confidence 9999999998766 333333322 22222222 No 11 >protein:vir:108311 Length: 249 # NCBI annotation: hypothetical protein # Family: family:all:28027 # MgeID: mge:2007 # MgeName: BA3 # Cross-refs: genbank:acc:YP_001552279;genbank:gi:160700604;genbank:GeneID:5758827 Probab=96.05 E-value=0.0011 Score=36.87 Aligned_cols=212 Identities=12% Similarity=0.033 Sum_probs=120.5 Q ss_pred CCccHHHHHHHHHHhhcccc----ccccChHHHHHHHHHHHHHHHHhcccCCCc-eeEEeecCCcce-e----------- Q lcl|NC_018452. 1 MPIAAADLIARAGEILQDED----HIRWEVPELLRWINDAARETIVRRPAARSV-ATVLPLAAGTRQ-E----------- 63 (215) Q Consensus 1 m~mt~~dlI~r~r~~l~D~~----~~rW~~~eL~~wlNdA~~e~~~rrpda~~~-~~~i~l~~G~~q-~----------- 63 (215) |+=|+.+||+.+-+++.=.. +--=..++-..-||+=+.+=..+|--.... .+++.+.+|+.+ + T Consensus 1 ~sqt~~~II~~ALk~aGvla~Getp~aee~~DA~~~Ln~Ml~~W~~~rl~V~~~~~~t~vl~~G~~~YtVGi~~~~~~~~ 80 (249) T protein:vir:10 1 MARTVGDIIRSSMRKIGVLAAGEPLPANEGDDALEVFAQMVDAWTNETLLIPVVNVVTKVLVENQPEYTIGIYPEPVPDP 80 (249) T ss_pred CccCHHHHHHHHHHHccccccCCCCCHhHHHHHHHHHHHHHHHHHhCceeEEeeeeeeeeccCCcceEEeeecccccccc Confidence 99999999999988876632 222233444556666666666667444433 445567888753 3 Q ss_pred echhHhhhhhhhhhhccccCCCcceeeecCHHHhccc-cCCCccCCCCCcceeeeeeCCCCc-EEEEeecCCCCeEEEEE Q lcl|NC_018452. 64 IPARGVELLDVVRNIGADGTTPGRIVRRVDRHLLDDQ-NPDWHAARPKNVVKHFTFDERAPR-IFYVYPPAVAGTKVETL 141 (215) Q Consensus 64 lp~~~~~li~v~r~~~~~~~~~g~~v~~vsr~~Ld~~-~P~W~~~~~~~~~~~~~~d~~~p~-~f~l~P~p~~~~~v~~~ 141 (215) ||...+.+-+..+-+.+-=+.+ ..+--..+++|.. |-.=.-++-..-|.+|.||.+-|. .+++||.|..+.+|.++ T Consensus 81 ~p~~~i~~~RP~~i~sA~~r~~--~d~~~~~~~i~~EdY~rI~~Kt~~~~ps~~f~d~g~p~g~i~vwP~P~~~~tl~~~ 158 (249) T protein:vir:10 81 LPSNHIETGRPERILSAFIRDR--YDTDYIQEIIDVETYSRISRKTNTSRPSRFYVSKGWPLNTILFESVPYQDETLHLE 158 (249) T ss_pred CCCCceEeecchheeeeeeecc--cccchhhhhhchhhhhhcCCCCCCCCceEEEEcCCCCcceEEEEecCCCCceEEEE Confidence 3444433322111110000000 1111233333332 111111223346888999988874 79999999999999999 Q ss_pred Eeeccc-cc---cCCCCCCCCChhhHHHHHHHHHHhhcC---ccccccchHHHHHHHHHHHHHhCCcchh--hhcccccc Q lcl|NC_018452. 142 HSELPP-DV---KEDTDSLDMGAEYVNVLVSYICYRALS---KDSEFANGTVAALHYQAFVDAVSDNNQQ--TTANSPNA 212 (215) Q Consensus 142 ~~~~P~-~v---~~~~d~~~i~~~y~~~Lv~w~lyRA~s---kD~e~~n~~rA~~h~q~F~~~lG~k~~~--d~~~~~~~ 212 (215) +-+ |+ .. +..+|.+.+|+.|+.+|..=.+-+.++ +--...=...|+.....-.++==...-. |+++..+- T Consensus 159 v~~-pL~~f~~~a~ltd~i~LPpey~~AL~~NLavel~peyG~ev~~~v~~~A~~a~~~ikraN~q~~~l~~~~~~~~~r 237 (249) T protein:vir:10 159 VVQ-PLSEILPTACLTDVINLPPGYERALIYNLCLELASEWGKEVTALVATQAVEGKKWLKRNNYRPLVLGADRAVATQR 237 (249) T ss_pred EEe-ehhhhccccccchhccCCHHHHHHHHHHHHHhhccccCCccCHHHHHHHHHHHHHHHhccCcceeeeccccccccc Confidence 877 66 56 677889999999999998776666543 3111111224444444444332222222 66666666 Q ss_pred cCC Q lcl|NC_018452. 213 NHV 215 (215) Q Consensus 213 d~~ 215 (215) +++ T Consensus 238 ~G~ 240 (249) T protein:vir:10 238 KGI 240 (249) T ss_pred Ccc Confidence 666 No 12 >protein:vir:95880 Length: 236 # NCBI annotation: 30 kDa protein # Family: family:all:31944 # MgeID: mge:1586 # MgeName: N4 # Cross-refs: genbank:acc:YP_950545;genbank:gi:119952236;genbank:GeneID:5075707 Probab=95.10 E-value=0.0028 Score=34.61 Aligned_cols=193 Identities=16% Similarity=0.177 Sum_probs=109.3 Q ss_pred CCccHHHHHHHHH-Hhhcccc-------c-cccChHHHHHHHHHHHHHHHHhcccCCCceeEEeecCCcc-eee-chhHh Q lcl|NC_018452. 1 MPIAAADLIARAG-EILQDED-------H-IRWEVPELLRWINDAARETIVRRPAARSVATVLPLAAGTR-QEI-PARGV 69 (215) Q Consensus 1 m~mt~~dlI~r~r-~~l~D~~-------~-~rW~~~eL~~wlNdA~~e~~~rrpda~~~~~~i~l~~G~~-q~l-p~~~~ 69 (215) |= .++|+|.+.. .+|+.+. . ..=..+.|+.=.|+|+.++-.| =+.....-.+.+..|+. +.| |...+ T Consensus 1 ~~-~lkev~~~La~gqL~N~~~V~~d~g~i~~~~~p~ii~a~N~gl~~Lh~R-f~lk~~~i~vem~eg~~~Y~L~~~y~v 78 (236) T protein:vir:95 1 MY-YIEELFCRLANGVLNNTGIVTDDRGDIEDDSKPFIIVAANEALTRLHGR-FNMRNNNVVVEMQEGRTNYPLLAKYAV 78 (236) T ss_pred Cc-hHHHHHHHHhcceecceeeeecccccccccccchHHHHHhHHHHHHhhh-hhhccCcEEEEEeeCceecccchhhhh Confidence 65 8999998753 3333211 1 1223566899999999997555 34455566777888875 554 32221 Q ss_pred ----------hh----------hhhhhhhccccCCCcceeeecCHHHhccccCCCccCCCCCcceeeeeeCCCCcEEEEe Q lcl|NC_018452. 70 ----------EL----------LDVVRNIGADGTTPGRIVRRVDRHLLDDQNPDWHAARPKNVVKHFTFDERAPRIFYVY 129 (215) Q Consensus 70 ----------~l----------i~v~r~~~~~~~~~g~~v~~vsr~~Ld~~~P~W~~~~~~~~~~~~~~d~~~p~~f~l~ 129 (215) .+ .++++-..--+ .+| +.+ -||...-.|..-+++ .+ .+-.- T Consensus 79 ~~~~p~~~~~~fI~d~~~~~~~~~ilri~~V~d-d~G-----~~~-~Lnd~~~~~sv~~P~----------~n--vLqi~ 139 (236) T protein:vir:95 79 QSYDPNEVKCPFIMDLAGEKFAEDVIRILEVYD-DKG-----RRR-PLNDRNNPCSLFTPR----------PN--VLQNN 139 (236) T ss_pred ccCCCCCcccchhhccccchhHHHHHHHHhhcc-CCC-----ccc-ccCCCCCCceeeeCC----------Cc--ceeee Confidence 11 11111000000 001 000 122221122211111 01 00111 Q ss_pred ecCCCCeEEEEEEeecccccc---CCCCCCCCChhhHHHHHHHHHHhhcCccccccchHHHHHHHHHHHHHhCCcchhhh Q lcl|NC_018452. 130 PPAVAGTKVETLHSELPPDVK---EDTDSLDMGAEYVNVLVSYICYRALSKDSEFANGTVAALHYQAFVDAVSDNNQQTT 206 (215) Q Consensus 130 P~p~~~~~v~~~~~~~P~~v~---~~~d~~~i~~~y~~~Lv~w~lyRA~skD~e~~n~~rA~~h~q~F~~~lG~k~~~d~ 206 (215) .|.....|++-|-+-|..+. +..-++.||..|..+|..|+-+|.+++=.-..|..++..+++.++..--.-...++ T Consensus 140 -~~~~~~~l~vkyq~~~~~l~~~eD~~~~idlP~t~~~aL~~yVA~r~~T~ig~~EnTAk~~~y~~~Yes~c~~v~~~~l 218 (236) T protein:vir:95 140 -APKAWEVLNVMYQAKHPKLSTAEDGYNEIDIPDTLDPALDAYIAYRYYTSLNTPESSAKAAEYLSFYDSICREVVEYDL 218 (236) T ss_pred -cCCCcceEEEEeecCCCceeeeeCCcccccCCcchHHHHHHHHHHHhhccCCCcccchhhhhHHHHHHHHHhhHHhhcc Confidence 34456679999999887654 44456889999999999999999999744334566777888888877776666677 Q ss_pred cccccccCC Q lcl|NC_018452. 207 ANSPNANHV 215 (215) Q Consensus 207 ~~~~~~d~~ 215 (215) ..++--|++ T Consensus 219 ~s~~~v~~~ 227 (236) T protein:vir:95 219 TSDTEVDTN 227 (236) T ss_pred ccccccccc Confidence 777645555 No 13 >protein:vir:351 Length: 242 # NCBI annotation: hypothetical protein # Family: family:all:3196 # MgeID: mge:9 # MgeName: Mx8 # Cross-refs: genbank:acc:NP_203465;genbank:gi:15320621;genbank:GeneID:921727 Probab=26.29 E-value=2 Score=18.98 Aligned_cols=192 Identities=14% Similarity=0.113 Sum_probs=96.2 Q ss_pred CCc-cHHHHHHHHHHh--hcccc---ccccCh---HHHHHHHHHHHHHHHHhcccCCCcee--EEeecCCc-ceeechhH Q lcl|NC_018452. 1 MPI-AAADLIARAGEI--LQDED---HIRWEV---PELLRWINDAARETIVRRPAARSVAT--VLPLAAGT-RQEIPARG 68 (215) Q Consensus 1 m~m-t~~dlI~r~r~~--l~D~~---~~rW~~---~eL~~wlNdA~~e~~~rrpda~~~~~--~i~l~~G~-~q~lp~~~ 68 (215) |.- |+-.||+++-.+ |.=++ +|-=+| -+|+.++|++-.++|.+.+ =....+ ++.-..|. .+.||++. T Consensus 1 ~~~~t~lsiin~v~~~i~L~~~~~a~v~sstD~~~~~l~ala~~~g~eia~~~d-W~~l~~~~~~t~~~~~~~y~lP~D~ 79 (242) T protein:vir:35 1 MAWDTAASIINDAAVELGLLATDVADPYASADVNLVQLCRLLKSLGQDMVRDYQ-WTHLQQQWTFATQVGLANYEMPPDY 79 (242) T ss_pred CchHHHHHHHHHHHHHhcccCCccccccccchHHHHHHHHHHHHHHHHHHHhcC-CcchheeeeecccccCCCCCcchhh Confidence 442 677788877766 33333 244444 4699999999999996643 222222 23333333 46899998 Q ss_pred hhhhhhhhhhccccCCCcce-eeecCHHHhccccCCCccCC----CCCcceeeeeeCCCCcEEEEeecCCCCeEEEEEEe Q lcl|NC_018452. 69 VELLDVVRNIGADGTTPGRI-VRRVDRHLLDDQNPDWHAAR----PKNVVKHFTFDERAPRIFYVYPPAVAGTKVETLHS 143 (215) Q Consensus 69 ~~li~v~r~~~~~~~~~g~~-v~~vsr~~Ld~~~P~W~~~~----~~~~~~~~~~d~~~p~~f~l~P~p~~~~~v~~~~~ 143 (215) .+++.- -+. +++-.++ +.++|.. +|.... .+.....|.-. + ..|.+||.|+.+-.+...|. T Consensus 80 ~R~v~~---~~w-~rt~~~p~~gP~s~~-------~W~~l~~~~sa~~~~~~~ri~--g-gqi~~~P~paa~~~~~f~Yi 145 (242) T protein:vir:35 80 NRFVDQ---TGW-NRTQRMPLLGPLSAQ-------GWQLLQVLTSAGTVDVMYRLV--G-GEFVLHPTPESVADIAYEYV 145 (242) T ss_pred HHhhcC---ccc-ceeecceecCCcChh-------hhhhhhhhccCCCCCceEEEE--c-CEEEeecCcccccceeEeee Confidence 877621 111 1233333 3445553 566422 11222223332 2 25999999998877777776 Q ss_pred ec-cc-----------cccCCCCCCCCChhhHHHHHHHHHHhhcCccccccchHHHHHHHHHHHHHhCCcchhh------ Q lcl|NC_018452. 144 EL-PP-----------DVKEDTDSLDMGAEYVNVLVSYICYRALSKDSEFANGTVAALHYQAFVDAVSDNNQQT------ 205 (215) Q Consensus 144 ~~-P~-----------~v~~~~d~~~i~~~y~~~Lv~w~lyRA~skD~e~~n~~rA~~h~q~F~~~lG~k~~~d------ 205 (215) .- +. ...+++|++-+|+.-. +-=+.+|--. +.+.+. +.-+..|+.+|-.....| T Consensus 146 SknWv~~~~~~~k~~~t~~ad~Dt~~l~erLL---~LGlIWRWkr--aKGldy---~e~l~~YE~aL~~~~~~d~G~~~l 217 (242) T protein:vir:35 146 SSHWVGTGGSETPNADAPESGGDTLFFDRRLL---VCGLKLRWQR--AKGFDS---TACQDDYDKALERAQGGDGAAPVL 217 (242) T ss_pred cCccccCCCCccccccccccCCCceechHHHH---hHhHHHHHHh--hcCCCH---HHHHHHHHHHHHHHHhhcCCCcee Confidence 54 21 1335567777887632 2223333221 222211 123344444443322222 Q ss_pred -hcccccccCC Q lcl|NC_018452. 206 -TANSPNANHV 215 (215) Q Consensus 206 -~~~~~~~d~~ 215 (215) +++-+-+..| T Consensus 218 ~l~~~~~~~p~ 228 (242) T protein:vir:35 218 SLNRRPFATNR 228 (242) T ss_pred cCCCCccCCcc Confidence 2222222233 Done!