Query lcl|NC_018085.1_cdsid_YP_006488676.1 [gene=BTCS33_gp06] [protein=phage head-tail adaptor] [protein_id=YP_006488676.1] [location=6118..6222] Match_columns 34 No_of_seqs 1 out of 7 Neff 1.0 Searched_HMMs 1612 Date Thu Nov 7 13:07:36 2013 Command /home/guerois/workspace/virfam/python/lib/hhsearch//hhsearch2 -i .//seq/seq_6 -d /home/guerois/workspace/virfam/python/profile_database/capsid_neck_tail.hhm -glob -cpu 7 -o .//seq/HHR/seq_6_vs_rec_db.hhr No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM 1 protein:vir:105006 Length: 107 93.9 4.9E-05 3.1E-08 44.2 0.3 34 1-34 74-107 (107) 2 protein:vir:107606 Length: 107 93.9 4.9E-05 3.1E-08 44.2 0.3 34 1-34 74-107 (107) 3 protein:vir:102856 Length: 107 93.9 4.9E-05 3.1E-08 44.2 0.3 34 1-34 74-107 (107) 4 protein:vir:102084 Length: 107 93.9 4.9E-05 3.1E-08 44.2 0.3 34 1-34 74-107 (107) 5 protein:vir:1272 Length: 119 # 86.6 0.0011 6.6E-07 36.9 0.6 34 1-34 78-119 (119) 6 protein:vir:93599 Length: 116 82.4 0.0025 1.5E-06 34.9 0.7 33 1-33 77-116 (116) 7 protein:vir:4343 Length: 118 # 79.4 0.0036 2.3E-06 34.0 0.6 34 1-34 82-117 (118) 8 protein:vir:1890 Length: 110 # 78.9 0.0037 2.3E-06 33.9 0.4 34 1-34 74-110 (110) 9 protein:vir:4955 Length: 116 # 71.7 0.0061 3.8E-06 32.7 -0.3 31 1-31 79-116 (116) 10 protein:vir:81177 Length: 109 71.7 0.0084 5.2E-06 32.0 0.4 34 1-34 73-108 (109) 11 protein:vir:81068 Length: 124 71.5 0.01 6.4E-06 31.5 0.9 34 1-34 83-124 (124) 12 protein:vir:5977 Length: 109 # 69.5 0.0064 4E-06 32.6 -0.7 34 1-34 72-109 (109) 13 protein:vir:4999 Length: 116 # 69.2 0.0096 6E-06 31.6 0.2 31 1-31 79-116 (116) 14 protein:vir:4858 Length: 116 # 68.6 0.008 5E-06 32.1 -0.4 31 1-31 79-116 (116) 15 protein:vir:4832 Length: 116 # 67.6 0.0097 6E-06 31.6 -0.2 31 1-31 79-116 (116) 16 protein:vir:97076 Length: 125 66.0 0.017 1.1E-05 30.3 0.9 34 1-34 84-125 (125) 17 protein:vir:1027 Length: 116 # 64.0 0.015 9.4E-06 30.6 0.1 32 1-32 79-116 (116) 18 protein:vir:3872 Length: 146 # 62.1 0.016 1E-05 30.4 0.0 31 1-31 114-146 (146) 19 protein:vir:10366 Length: 124 61.3 0.026 1.6E-05 29.2 1.0 34 1-34 83-124 (124) 20 protein:vir:7411 Length: 116 # 60.7 0.019 1.2E-05 30.0 0.1 32 1-32 79-116 (116) 21 protein:vir:100244 Length: 109 60.3 0.021 1.3E-05 29.8 0.2 34 1-34 75-109 (109) 22 protein:vir:3993 Length: 117 # 58.8 0.023 1.4E-05 29.6 0.2 31 1-31 79-117 (117) 23 protein:vir:1385 Length: 107 # 54.3 0.034 2.1E-05 28.6 0.3 31 1-31 75-107 (107) 24 protein:vir:1436 Length: 108 # 53.1 0.032 2E-05 28.8 0.0 34 1-34 74-108 (108) 25 protein:vir:193 Length: 112 # 45.0 0.07 4.3E-05 26.9 0.5 33 1-33 73-112 (112) 26 protein:vir:100886 Length: 113 41.8 0.081 5.1E-05 26.6 0.3 31 1-31 76-113 (113) 27 protein:vir:5743 Length: 117 # 41.4 0.075 4.6E-05 26.8 0.1 32 1-32 79-117 (117) 28 protein:vir:4459 Length: 134 # 40.7 0.08 5E-05 26.6 0.1 34 1-34 87-123 (134) 29 protein:vir:80342 Length: 108 39.3 0.086 5.3E-05 26.4 0.1 34 1-34 74-108 (108) 30 protein:vir:100226 Length: 114 39.0 0.098 6.1E-05 26.1 0.3 31 1-31 77-114 (114) 31 protein:vir:102144 Length: 113 28.5 0.21 0.00013 24.3 0.4 31 1-31 81-113 (113) 32 protein:vir:1242 Length: 111 # 27.9 0.19 0.00012 24.5 0.0 34 1-34 74-109 (111) 33 protein:vir:100134 Length: 109 25.3 0.18 0.00011 24.6 -0.6 32 1-32 75-109 (109) 34 protein:vir:105035 Length: 112 21.0 0.32 0.0002 23.3 -0.2 32 1-34 76-111 (112) No 1 >protein:vir:105006 Length: 107 # NCBI annotation: putative head-tail adaptor protein # Family: family:all:116 # ACLAME annotation(s): phi:0000012 - phage head tail joining # MgeID: mge:1490 # MgeName: W Beta # Cross-refs: genbank:acc:YP_459971;genbank:gi:85701386;genbank:GeneID:3882147 Probab=93.89 E-value=4.9e-05 Score=44.19 Aligned_cols=34 Identities=88% Similarity=1.370 Sum_probs=33.6 Q ss_pred CccchhhhhhhhhhhccCCcceeEEEeecCCCCC Q lcl|NC_018085. 1 MKIKYKNVIYDIVSVIPTEKHTLSIMWKRGGMNG 34 (34) Q Consensus 1 mkikyknviydivsviptekhtlsimwkrggmng 34 (34) |+|.|++.+|+|.+|.|.+++.+-++...+.+|| T Consensus 74 ~ri~~~g~~y~I~~v~~~~~~~~~l~~~~~~~~G 107 (107) T protein:vir:10 74 MKIKYKNVIYDIVSVIPTQDHTLLIMWKRGEMNG 107 (107) T ss_pred cEEEECCeEEEEEeecCCCCCcEEEEEEEeecCC Confidence 9999999999999999999999999999999999 No 2 >protein:vir:107606 Length: 107 # NCBI annotation: head-tail adaptor protein # Family: family:all:116 # ACLAME annotation(s): phi:0000012 - phage head tail joining # MgeID: mge:1491 # MgeName: Gamma # Cross-refs: genbank:acc:YP_338190;genbank:gi:77020176;genbank:GeneID:3703737 Probab=93.89 E-value=4.9e-05 Score=44.19 Aligned_cols=34 Identities=88% Similarity=1.370 Sum_probs=33.6 Q ss_pred CccchhhhhhhhhhhccCCcceeEEEeecCCCCC Q lcl|NC_018085. 1 MKIKYKNVIYDIVSVIPTEKHTLSIMWKRGGMNG 34 (34) Q Consensus 1 mkikyknviydivsviptekhtlsimwkrggmng 34 (34) |+|.|++.+|+|.+|.|.+++.+-++...+.+|| T Consensus 74 ~ri~~~g~~y~I~~v~~~~~~~~~l~~~~~~~~G 107 (107) T protein:vir:10 74 MKIKYKNVIYDIVSVIPTQDHTLLIMWKRGEMNG 107 (107) T ss_pred cEEEECCeEEEEEeecCCCCCcEEEEEEEeecCC Confidence 9999999999999999999999999999999999 No 3 >protein:vir:102856 Length: 107 # NCBI annotation: head-tail adaptor protein # Family: family:all:116 # ACLAME annotation(s): phi:0000012 - phage head tail joining # MgeID: mge:1492 # MgeName: Cherry # Cross-refs: genbank:acc:YP_338139;genbank:gi:77020229;genbank:GeneID:3703765 Probab=93.89 E-value=4.9e-05 Score=44.19 Aligned_cols=34 Identities=88% Similarity=1.370 Sum_probs=33.6 Q ss_pred CccchhhhhhhhhhhccCCcceeEEEeecCCCCC Q lcl|NC_018085. 1 MKIKYKNVIYDIVSVIPTEKHTLSIMWKRGGMNG 34 (34) Q Consensus 1 mkikyknviydivsviptekhtlsimwkrggmng 34 (34) |+|.|++.+|+|.+|.|.+++.+-++...+.+|| T Consensus 74 ~ri~~~g~~y~I~~v~~~~~~~~~l~~~~~~~~G 107 (107) T protein:vir:10 74 MKIKYKNVIYDIVSVIPTQDHTLLIMWKRGEMNG 107 (107) T ss_pred cEEEECCeEEEEEeecCCCCCcEEEEEEEeecCC Confidence 9999999999999999999999999999999999 No 4 >protein:vir:102084 Length: 107 # NCBI annotation: head-tail adaptor # Family: family:all:116 # ACLAME annotation(s): phi:0000012 - phage head tail joining # MgeID: mge:1503 # MgeName: Fah # Cross-refs: genbank:acc:YP_512317;genbank:gi:89152486;genbank:GeneID:3953077 Probab=93.89 E-value=4.9e-05 Score=44.19 Aligned_cols=34 Identities=88% Similarity=1.370 Sum_probs=33.6 Q ss_pred CccchhhhhhhhhhhccCCcceeEEEeecCCCCC Q lcl|NC_018085. 1 MKIKYKNVIYDIVSVIPTEKHTLSIMWKRGGMNG 34 (34) Q Consensus 1 mkikyknviydivsviptekhtlsimwkrggmng 34 (34) |+|.|++.+|+|.+|.|.+++.+-++...+.+|| T Consensus 74 ~ri~~~g~~y~I~~v~~~~~~~~~l~~~~~~~~G 107 (107) T protein:vir:10 74 MKIKYKNVIYDIVSVIPTQDHTLLIMWKRGEMNG 107 (107) T ss_pred cEEEECCeEEEEEeecCCCCCcEEEEEEEeecCC Confidence 9999999999999999999999999999999999 No 5 >protein:vir:1272 Length: 119 # NCBI annotation: hypothetical protein # Family: family:all:116 # ACLAME annotation(s): phi:0000012 - phage head tail joining # MgeID: mge:329 # MgeName: phi-105 # Cross-refs: genbank:acc:NP_690764;genbank:gi:22855004;genbank:GeneID:955243 Probab=86.63 E-value=0.0011 Score=36.89 Aligned_cols=34 Identities=29% Similarity=0.638 Sum_probs=29.6 Q ss_pred Ccc------chhhhhhhhhhhc-cCCcce-eEEEeecCCCCC Q lcl|NC_018085. 1 MKI------KYKNVIYDIVSVI-PTEKHT-LSIMWKRGGMNG 34 (34) Q Consensus 1 mki------kyknviydivsvi-ptekht-lsimwkrggmng 34 (34) |.| +|++.+|+|.+|+ |.++|. |.|+.+.++.|| T Consensus 78 ~Ri~~~~~~~~~g~~y~I~~v~~~~~~~~~l~l~c~e~~~~g 119 (119) T protein:vir:12 78 MRIVKRVPKDKTERVFDILDTNDPDDQEEELEILCQEVGING 119 (119) T ss_pred ceEeeccccccCCeEEEEEecCCCccCCeEEEEEEEEeecCC Confidence 554 6789999999998 558885 899999999999 No 6 >protein:vir:93599 Length: 116 # NCBI annotation: putative head-tail adaptor # Family: family:all:116 # ACLAME annotation(s): phi:0000012 - phage head tail joining # MgeID: mge:157 # MgeName: phi 4795 # Cross-refs: genbank:acc:YP_001449298;genbank:gi:157166046;interpro:IPR006453;interpro:IPR013045;uniprot:Q6H9U3;genbank:GeneID:5580421 Probab=82.38 E-value=0.0025 Score=34.88 Aligned_cols=33 Identities=21% Similarity=0.523 Sum_probs=29.0 Q ss_pred Cccc-----hhhhhhhhhhhc-cCCcce-eEEEeecCCCC Q lcl|NC_018085. 1 MKIK-----YKNVIYDIVSVI-PTEKHT-LSIMWKRGGMN 33 (34) Q Consensus 1 mkik-----yknviydivsvi-ptekht-lsimwkrggmn 33 (34) |.|. |++-+|+|.+|. |.++|. |.|+.+.||.+ T Consensus 77 ~Ri~~~~~~~~g~~y~I~~v~~~~~~~~~l~i~c~eg~~~ 116 (116) T protein:vir:93 77 SRLHVLSGPWRDRILNVVGLPVPDATGGRLEILCRLGGEK 116 (116) T ss_pred cEEEEcCcccCCeEEEEEecCCCCCCCcEEEEEEEecCCC Confidence 7777 899999999995 577766 89999999999 No 7 >protein:vir:4343 Length: 118 # NCBI annotation: Orf10 # Family: family:all:116 # ACLAME annotation(s): phi:0000012 - phage head tail joining # MgeID: mge:93 # MgeName: D3 # Cross-refs: genbank:acc:NP_061506;genbank:gi:9635594;genbank:GeneID:1262867 Probab=79.40 E-value=0.0036 Score=33.95 Aligned_cols=34 Identities=15% Similarity=0.314 Sum_probs=30.9 Q ss_pred CccchhhhhhhhhhhccC-Cc-ceeEEEeecCCCCC Q lcl|NC_018085. 1 MKIKYKNVIYDIVSVIPT-EK-HTLSIMWKRGGMNG 34 (34) Q Consensus 1 mkikyknviydivsvipt-ek-htlsimwkrggmng 34 (34) |+|.|++.+|+|.+|.+. ++ ..|.|+.+.|..+| T Consensus 82 ~Ri~~~g~~y~I~~v~~~~~~~~~l~i~~~e~v~~g 117 (118) T protein:vir:43 82 WRVLWDGRVYNITSAETDVTARREWRLRCSDGLTDG 117 (118) T ss_pred cEEEECCeEEEEEecCCcccCCeEEEEEEEEeccCC Confidence 999999999999999764 55 48999999999999 No 8 >protein:vir:1890 Length: 110 # NCBI annotation: gp9 # Family: family:all:116 # ACLAME annotation(s): phi:0000012 - phage head tail joining # MgeID: mge:41 # MgeName: HK022 # Cross-refs: genbank:acc:NP_037670;genbank:gi:9634128;genbank:GeneID:1262503 Probab=78.91 E-value=0.0037 Score=33.91 Aligned_cols=34 Identities=24% Similarity=0.531 Sum_probs=30.5 Q ss_pred Cccchhhhhhhhhhhcc--CCcc-eeEEEeecCCCCC Q lcl|NC_018085. 1 MKIKYKNVIYDIVSVIP--TEKH-TLSIMWKRGGMNG 34 (34) Q Consensus 1 mkikyknviydivsvip--tekh-tlsimwkrggmng 34 (34) |+|.|++.+|+|.+|+| ..++ .|.|.-+.++-+| T Consensus 74 ~ri~~~g~~y~I~~v~~d~~~~~~~l~i~~~e~~~~G 110 (110) T protein:vir:18 74 HRILFRGAVYNIHGVLPDPKSGREYLTLPCSEGVNDG 110 (110) T ss_pred cEEEECCeEEEEEeccCCcccCCeEEEEEEEEeccCC Confidence 99999999999999986 4557 5899999999999 No 9 >protein:vir:4955 Length: 116 # NCBI annotation: putative head-tail joining protein # Family: family:all:1030 # MgeID: mge:108 # MgeName: Sfi19 # Cross-refs: genbank:acc:NP_049931;genbank:gi:9632902;genbank:GeneID:1262078 Probab=71.70 E-value=0.0061 Score=32.72 Aligned_cols=31 Identities=23% Similarity=0.480 Sum_probs=24.6 Q ss_pred CccchhhhhhhhhhhccCCccee---EEE----eecCC Q lcl|NC_018085. 1 MKIKYKNVIYDIVSVIPTEKHTL---SIM----WKRGG 31 (34) Q Consensus 1 mkikyknviydivsviptekhtl---sim----wkrgg 31 (34) |+++|++.+|||+++.|.+...+ .+. =+++| T Consensus 79 ~~v~~~g~~Y~I~~IspD~~~~~~~yD~iTlk~~~k~g 116 (116) T protein:vir:49 79 QVVTLNGTQYDIVRISPDDNFGFNHYDFLTLKKRKKVG 116 (116) T ss_pred cEEEECCeEEEEEEeCCCCccCcceeeEEEEEEEeeCC Confidence 99999999999999999988632 111 37777 No 10 >protein:vir:81177 Length: 109 # NCBI annotation: putative head-tail adaptor # Family: family:all:116 # ACLAME annotation(s): phi:0000012 - phage head tail joining # MgeID: mge:1892 # MgeName: Geobacillus virus E2 # Cross-refs: genbank:acc:YP_001285814;genbank:gi:148747735;genbank:GeneID:5247220 Probab=71.65 E-value=0.0084 Score=31.97 Aligned_cols=34 Identities=35% Similarity=0.507 Sum_probs=29.6 Q ss_pred CccchhhhhhhhhhhccC-Ccc-eeEEEeecCCCCC Q lcl|NC_018085. 1 MKIKYKNVIYDIVSVIPT-EKH-TLSIMWKRGGMNG 34 (34) Q Consensus 1 mkikyknviydivsvipt-ekh-tlsimwkrggmng 34 (34) |+|.|++.+|+|.+|.|. +++ -|.|.-+.|+.+| T Consensus 73 ~ri~~~g~~y~I~~v~~~~~~~~~l~i~~~e~~~~~ 108 (109) T protein:vir:81 73 MKIDYQGRLFDIQSVLNDDEGKKTLTIIATERVAAD 108 (109) T ss_pred cEEEECCeEEEEEeecCCccCCcEEEEEEEEeecCC Confidence 999999999999999874 444 6889999998888 No 11 >protein:vir:81068 Length: 124 # NCBI annotation: p11 # Family: family:all:7034 # MgeID: mge:1889 # MgeName: Xop411 # Cross-refs: genbank:acc:YP_001285681;genbank:gi:148727189;genbank:GeneID:5247113 Probab=71.52 E-value=0.01 Score=31.47 Aligned_cols=34 Identities=15% Similarity=0.197 Sum_probs=25.9 Q ss_pred Cccchh------hhhhhhhhhccCC-cc-eeEEEeecCCCCC Q lcl|NC_018085. 1 MKIKYK------NVIYDIVSVIPTE-KH-TLSIMWKRGGMNG 34 (34) Q Consensus 1 mkikyk------nviydivsvipte-kh-tlsimwkrggmng 34 (34) |+|+|. +.+|||.+|+|.+ +| .|-||-+.|+-.. T Consensus 83 mRi~~~~~~~~~g~iy~I~~Vi~d~~~~~~l~L~C~~g~~~~ 124 (124) T protein:vir:81 83 DRLLIRVPFTARDMIMSVTGVIIDFADASHAYILAQAGTNES 124 (124) T ss_pred ceEEECCCcccCCeeEEEEEecCCCCCCeEEEEEEEecCCCC Confidence 888884 8899999999974 56 5778886655444 No 12 >protein:vir:5977 Length: 109 # NCBI annotation: hypothetical protein # Family: family:all:788 # MgeID: mge:125 # MgeName: SPP1 # Cross-refs: genbank:acc:NP_690677;genbank:geneid:6329133;genbank:gi:22855071;interpro:IPR013045;uniprot:O48446;genbank:GeneID:955315 Probab=69.46 E-value=0.0064 Score=32.59 Aligned_cols=34 Identities=21% Similarity=0.262 Sum_probs=24.5 Q ss_pred CccchhhhhhhhhhhccCCcceeEEEe---e-cCCCCC Q lcl|NC_018085. 1 MKIKYKNVIYDIVSVIPTEKHTLSIMW---K-RGGMNG 34 (34) Q Consensus 1 mkikyknviydivsviptekhtlsimw---k-rggmng 34 (34) |.|.|++.+|+|+|+++..+-...++. + .|.-+| T Consensus 72 ~Ri~~~gr~y~I~~v~~d~~~~~~~l~~~~~e~g~~~g 109 (109) T protein:vir:59 72 MRVIYRGKIVTFIGDPVDLSGLQEITRIKGKEDGAYVG 109 (109) T ss_pred cEEEECCeEEEEEeccCCCCCCeEEEEEEEEEeeccCC Confidence 999999999999999876544444443 3 455556 No 13 >protein:vir:4999 Length: 116 # NCBI annotation: putative head-tail joining protein # Family: family:all:1030 # MgeID: mge:109 # MgeName: Sfi21 # Cross-refs: genbank:acc:NP_049973;genbank:gi:9632945;genbank:GeneID:1262108 Probab=69.15 E-value=0.0096 Score=31.64 Aligned_cols=31 Identities=23% Similarity=0.331 Sum_probs=24.4 Q ss_pred CccchhhhhhhhhhhccCCcce------eEEE-eecCC Q lcl|NC_018085. 1 MKIKYKNVIYDIVSVIPTEKHT------LSIM-WKRGG 31 (34) Q Consensus 1 mkikyknviydivsviptekht------lsim-wkrgg 31 (34) |+++|++.+|||+++.|.|... |.+- -+++| T Consensus 79 ~~v~~~g~~Y~I~~is~Dd~~~~~~yD~lTlk~~~~~g 116 (116) T protein:vir:49 79 QVVVLHGTQYDIIRASSNENFGINRYDFLPVRQRKNVG 116 (116) T ss_pred cEEEECCeEEEEEEeCCCCCCCcceeeEEEEEEeecCC Confidence 9999999999999999988853 2221 36777 No 14 >protein:vir:4858 Length: 116 # NCBI annotation: putative head-tail joining protein # Family: family:all:1030 # MgeID: mge:106 # MgeName: DT1 # Cross-refs: genbank:acc:NP_049398;genbank:gi:9632426;genbank:GeneID:1258519 Probab=68.63 E-value=0.008 Score=32.07 Aligned_cols=31 Identities=23% Similarity=0.420 Sum_probs=24.6 Q ss_pred CccchhhhhhhhhhhccCCccee---EEE----eecCC Q lcl|NC_018085. 1 MKIKYKNVIYDIVSVIPTEKHTL---SIM----WKRGG 31 (34) Q Consensus 1 mkikyknviydivsviptekhtl---sim----wkrgg 31 (34) |+++|++.+|||+++.|.+...+ .+. -+++| T Consensus 79 ~~v~~~G~~Y~I~~Is~D~~~~~~~yD~iTlk~~~k~g 116 (116) T protein:vir:48 79 QVVTLNGTQYDIVRISADENFGFNHYDFLTLRKHKKVG 116 (116) T ss_pred cEEEECCeEEEEEEeCCCCCcCcceeeEEEEEEEeeCC Confidence 99999999999999999988632 111 37788 No 15 >protein:vir:4832 Length: 116 # NCBI annotation: ORF28 # Family: family:all:1030 # MgeID: mge:105 # MgeName: 7201 # Cross-refs: genbank:acc:NP_038329;genbank:gi:9634655;genbank:GeneID:1262597 Probab=67.62 E-value=0.0097 Score=31.62 Aligned_cols=31 Identities=29% Similarity=0.497 Sum_probs=24.7 Q ss_pred CccchhhhhhhhhhhccCCcce------eEEE-eecCC Q lcl|NC_018085. 1 MKIKYKNVIYDIVSVIPTEKHT------LSIM-WKRGG 31 (34) Q Consensus 1 mkikyknviydivsviptekht------lsim-wkrgg 31 (34) |+++|++.+|||+++.|.+... |.+- -+++| T Consensus 79 ~~v~~~g~~Y~I~~Is~Dd~~~~~~yD~lTlk~~~k~g 116 (116) T protein:vir:48 79 QVVTLNGTQYDIVRISPDENFGFNHYDFLTLKKRKKVG 116 (116) T ss_pred cEEEECCeEEEEEEeCCCCCcCcceeeEEEEEEEeeCC Confidence 9999999999999999998853 2221 47788 No 16 >protein:vir:97076 Length: 125 # NCBI annotation: putative head-to-tail joining protein # Family: family:all:7034 # MgeID: mge:1653 # MgeName: OP1 # Cross-refs: genbank:acc:YP_453567;genbank:gi:84662602;genbank:GeneID:5142491 Probab=65.98 E-value=0.017 Score=30.25 Aligned_cols=34 Identities=15% Similarity=0.198 Sum_probs=26.5 Q ss_pred Cccchh------hhhhhhhhhccC-Ccc-eeEEEeecCCCCC Q lcl|NC_018085. 1 MKIKYK------NVIYDIVSVIPT-EKH-TLSIMWKRGGMNG 34 (34) Q Consensus 1 mkikyk------nviydivsvipt-ekh-tlsimwkrggmng 34 (34) |+|.|+ ..+|||.+|+|. +.| -|-++-+.|+-.= T Consensus 84 mRi~~~~r~~~~~~iydI~~v~~d~~~~~~l~L~Ce~g~~~~ 125 (125) T protein:vir:97 84 DRLLIRVPFTARDMILSVTGVILDFADSSHAYILAQAGTNEI 125 (125) T ss_pred ceEEECCccccCceeEEEeeecCCccCCcEEEEEEEecCCCC Confidence 999998 458999999997 557 4778887665444 No 17 >protein:vir:1027 Length: 116 # NCBI annotation: Orf47 # Family: family:all:1030 # MgeID: mge:20 # MgeName: bIL286 # Cross-refs: genbank:acc:NP_076681;genbank:gi:13095790;genbank:GeneID:920343 Probab=63.97 E-value=0.015 Score=30.57 Aligned_cols=32 Identities=25% Similarity=0.531 Sum_probs=24.3 Q ss_pred CccchhhhhhhhhhhccCCcce------eEEEeecCCC Q lcl|NC_018085. 1 MKIKYKNVIYDIVSVIPTEKHT------LSIMWKRGGM 32 (34) Q Consensus 1 mkikyknviydivsviptekht------lsimwkrggm 32 (34) |+++|++.+|||+++.|.+... |.|-=+.-|. T Consensus 79 m~v~~~g~~Y~I~~Is~Dd~~~~~~yD~iTlk~~~kga 116 (116) T protein:vir:10 79 MFVQIDDVLYNIINISSDESAKLIKFDILTLQAKKKGA 116 (116) T ss_pred cEEEECCeEEEEEEeCCCCccCceeeeeEEEEEeeccC Confidence 9999999999999999988754 4444333333 No 18 >protein:vir:3872 Length: 146 # NCBI annotation: putative head-tail joining protein # Family: family:all:28619 # MgeID: mge:82 # MgeName: A2 # Cross-refs: genbank:acc:NP_680489;swissprot:trembl:p94213;genbank:gi:22296529;uniprot:P94213;genbank:GeneID:951708 Probab=62.15 E-value=0.016 Score=30.36 Aligned_cols=31 Identities=19% Similarity=0.290 Sum_probs=24.3 Q ss_pred CccchhhhhhhhhhhccCCcce--eEEEeecCC Q lcl|NC_018085. 1 MKIKYKNVIYDIVSVIPTEKHT--LSIMWKRGG 31 (34) Q Consensus 1 mkikyknviydivsviptekht--lsimwkrgg 31 (34) |+|.|++-.|||++|.|.+.|. +-|.=|.-- T Consensus 114 mRI~y~gk~YeI~~I~pd~~~k~~~~I~akeVS 146 (146) T protein:vir:38 114 WRIQWRGNEYQITGLDPDYERRDLTTITAKAVS 146 (146) T ss_pred cEEEECCeEEEEeeeCCccccCcEEEEEEEEeC Confidence 9999999999999999998875 334344433 No 19 >protein:vir:10366 Length: 124 # NCBI annotation: conserved phage protein; annotated as head-tail joining in some phages # Family: family:all:7034 # MgeID: mge:183 # MgeName: Xp10 # Cross-refs: genbank:acc:NP_858958;genbank:gi:32128423;genbank:GeneID:2648383 Probab=61.25 E-value=0.026 Score=29.23 Aligned_cols=34 Identities=15% Similarity=0.219 Sum_probs=25.9 Q ss_pred Cccchh------hhhhhhhhhccCC-cce-eEEEeecCCCCC Q lcl|NC_018085. 1 MKIKYK------NVIYDIVSVIPTE-KHT-LSIMWKRGGMNG 34 (34) Q Consensus 1 mkikyk------nviydivsvipte-kht-lsimwkrggmng 34 (34) |+|.|+ ..+|||.+|+|.+ .|. |-|+-+.|+-.- T Consensus 83 mRi~~~~~~~~~g~iy~I~~V~~d~~~r~~l~L~c~~g~~~~ 124 (124) T protein:vir:10 83 DRLLIRVPFTARDMILSVTGVILDFADASHAYILAQAGTNES 124 (124) T ss_pred ceEEeCCccccCCeEEEEeecCCCCCCCcEEEEEEEecCCCC Confidence 999988 7799999999974 554 567777665444 No 20 >protein:vir:7411 Length: 116 # NCBI annotation: hypothetical protein # Family: family:all:1030 # MgeID: mge:146 # MgeName: P335 # Cross-refs: genbank:acc:NP_839928;genbank:gi:30089898;genbank:GeneID:1260685 Probab=60.69 E-value=0.019 Score=29.99 Aligned_cols=32 Identities=25% Similarity=0.531 Sum_probs=24.2 Q ss_pred CccchhhhhhhhhhhccCCcce------eEEEeecCCC Q lcl|NC_018085. 1 MKIKYKNVIYDIVSVIPTEKHT------LSIMWKRGGM 32 (34) Q Consensus 1 mkikyknviydivsviptekht------lsimwkrggm 32 (34) |+++|++.+|||+++.|.+... |.|-=+.-|. T Consensus 79 m~v~~~g~~Y~Iv~Is~Dd~~~~~~yD~iTlk~~~~ga 116 (116) T protein:vir:74 79 MFVQIDDVLYNIINISSDESAKLIKFDILTLQAKKKGA 116 (116) T ss_pred cEEEECCeEEEEEEeCCCCccCcceeeeEEEEEEeecC Confidence 9999999999999999988653 4554333333 No 21 >protein:vir:100244 Length: 109 # NCBI annotation: gp73 # Family: family:all:116 # ACLAME annotation(s): phi:0000012 - phage head tail joining # MgeID: mge:1619 # MgeName: Bcep176 # Cross-refs: genbank:acc:YP_355409;genbank:gi:77864699;genbank:GeneID:3725966 Probab=60.25 E-value=0.021 Score=29.82 Aligned_cols=34 Identities=35% Similarity=0.638 Sum_probs=28.3 Q ss_pred CccchhhhhhhhhhhccCCcce-eEEEeecCCCCC Q lcl|NC_018085. 1 MKIKYKNVIYDIVSVIPTEKHT-LSIMWKRGGMNG 34 (34) Q Consensus 1 mkikyknviydivsviptekht-lsimwkrggmng 34 (34) |.|.|++.+|+|.+|.|.+++. |.|+.+.|=-.= T Consensus 75 ~ri~~~g~~y~I~~v~~~~~~~~l~i~c~egv~~~ 109 (109) T protein:vir:10 75 MRIRYGDQLYDIVAVLPNRRKGSLDLPVKVGEKYV 109 (109) T ss_pred cEEEECCeEEEEEeeccCCCCcEEEEEEEeeeccC Confidence 9999999999999999998874 788888753333 No 22 >protein:vir:3993 Length: 117 # NCBI annotation: unknown # Family: family:all:1030 # MgeID: mge:319 # MgeName: BK5-T # Cross-refs: genbank:acc:NP_116501;genbank:gi:14251134;genbank:GeneID:921310 Probab=58.77 E-value=0.023 Score=29.57 Aligned_cols=31 Identities=26% Similarity=0.575 Sum_probs=23.8 Q ss_pred CccchhhhhhhhhhhccCCcce------eEE--EeecCC Q lcl|NC_018085. 1 MKIKYKNVIYDIVSVIPTEKHT------LSI--MWKRGG 31 (34) Q Consensus 1 mkikyknviydivsviptekht------lsi--mwkrgg 31 (34) |+++|++.+|||+++.|.|... |.| -=|.|+ T Consensus 79 m~v~~~g~~Y~I~~Is~Dd~~~~~~yD~iTlk~~~~~g~ 117 (117) T protein:vir:39 79 MCVQIDDVLYNIINISSDESAKLIKFDILTLQAKKKKGA 117 (117) T ss_pred cEEEECCeEEEEeEeCCCCccCceeeeeEEEEEeeccCC Confidence 9999999999999999988653 333 334444 No 23 >protein:vir:1385 Length: 107 # NCBI annotation: Gp8 protein # Family: family:all:3858 # MgeID: mge:314 # MgeName: phi3626 # Cross-refs: genbank:acc:NP_612837;genbank:gi:20065971;genbank:GeneID:935786 Probab=54.28 E-value=0.034 Score=28.63 Aligned_cols=31 Identities=10% Similarity=0.036 Sum_probs=25.3 Q ss_pred CccchhhhhhhhhhhccCC-cc-eeEEEeecCC Q lcl|NC_018085. 1 MKIKYKNVIYDIVSVIPTE-KH-TLSIMWKRGG 31 (34) Q Consensus 1 mkikyknviydivsvipte-kh-tlsimwkrgg 31 (34) |+|.|++.+|||.||.|.+ +| .|.|+.++== T Consensus 75 ~Ri~~~g~~y~I~~v~~~~~~~~~l~i~c~eV~ 107 (107) T protein:vir:13 75 FIVEWQGRKYEIYYPDFLGYNKQFVKLKCKEVL 107 (107) T ss_pred cEEEECCeEEEEEecCCcccCCeEEEEEEEEeC Confidence 8999999999999999864 44 4777777654 No 24 >protein:vir:1436 Length: 108 # NCBI annotation: hypothetical protein # Family: family:all:116 # ACLAME annotation(s): phi:0000012 - phage head tail joining # MgeID: mge:30 # MgeName: phiE125 # Cross-refs: genbank:acc:NP_536365;genbank:gi:17975170;genbank:GeneID:929148 Probab=53.10 E-value=0.032 Score=28.75 Aligned_cols=34 Identities=35% Similarity=0.613 Sum_probs=26.5 Q ss_pred CccchhhhhhhhhhhccCCcce-eEEEeecCCCCC Q lcl|NC_018085. 1 MKIKYKNVIYDIVSVIPTEKHT-LSIMWKRGGMNG 34 (34) Q Consensus 1 mkikyknviydivsviptekht-lsimwkrggmng 34 (34) |+|.|++.+|+|.+|.|.+++. |.|+.+.|=--- T Consensus 74 ~ri~~~g~~y~I~~v~~~~~~~~l~i~~~~~v~~~ 108 (108) T protein:vir:14 74 MRIRYDGRLYDITAVLPARKRGYLDLSVKVGEKYV 108 (108) T ss_pred cEEEECCeEEEEEeeccCCCCCEEEEEEEeeeecC Confidence 9999999999999999988876 567766432212 No 25 >protein:vir:193 Length: 112 # NCBI annotation: putative head-tail adaptor # Family: family:all:116 # ACLAME annotation(s): phi:0000012 - phage head tail joining # MgeID: mge:6 # MgeName: HK97 # Cross-refs: genbank:acc:NP_037703;genbank:gi:9634168;genbank:GeneID:1262533 Probab=45.04 E-value=0.07 Score=26.93 Aligned_cols=33 Identities=21% Similarity=0.423 Sum_probs=27.0 Q ss_pred Cccc-----hhhhhhhhhhhc-cCCcc-eeEEEeecCCCC Q lcl|NC_018085. 1 MKIK-----YKNVIYDIVSVI-PTEKH-TLSIMWKRGGMN 33 (34) Q Consensus 1 mkik-----yknviydivsvi-ptekh-tlsimwkrggmn 33 (34) |+|+ |++.+|+|.||+ |.++| .|.|+.+.|.-. T Consensus 73 ~ri~~~~~~~~g~~y~I~~v~~~~~~~~~l~l~c~egv~~ 112 (112) T protein:vir:19 73 SRLEVLSGPYKGQVLNIIGPPVANATGTRLEILCKTGAEK 112 (112) T ss_pred cceeecceeeCCeEEEEEecCCCccCCcEEEEEEEEcccC Confidence 7775 899999999998 46776 478999987777 No 26 >protein:vir:100886 Length: 113 # NCBI annotation: putative head-tail joining protein # Family: family:all:1030 # MgeID: mge:1473 # MgeName: Lc-Nu # Cross-refs: genbank:acc:YP_358766;genbank:gi:77999992;genbank:GeneID:3726157 Probab=41.81 E-value=0.081 Score=26.55 Aligned_cols=31 Identities=19% Similarity=0.584 Sum_probs=23.6 Q ss_pred CccchhhhhhhhhhhccCCcce------eEEE-eecCC Q lcl|NC_018085. 1 MKIKYKNVIYDIVSVIPTEKHT------LSIM-WKRGG 31 (34) Q Consensus 1 mkikyknviydivsviptekht------lsim-wkrgg 31 (34) |+++|++.+|||+++.|.|... +.+- -++|+ T Consensus 76 m~v~~~g~~Y~I~~Is~Dd~~~~~~yD~iTlkk~~~ga 113 (113) T protein:vir:10 76 KQARLDGIVYDISDISPDDSNDAIRYDYLTLVKTTKGA 113 (113) T ss_pred cEEEECCeEEEEEEeCCCCCCCcceeeeEEEEEEecCC Confidence 9999999999999999988753 2222 34555 No 27 >protein:vir:5743 Length: 117 # NCBI annotation: hypothetical protein # Family: family:all:11389 # MgeID: mge:122 # MgeName: PY54 # Cross-refs: genbank:acc:NP_892054;genbank:gi:33770517;interpro:IPR006453;uniprot:Q7Y406;genbank:GeneID:2637487;interpro:IPR013045 Probab=41.41 E-value=0.075 Score=26.76 Aligned_cols=32 Identities=13% Similarity=0.076 Sum_probs=21.7 Q ss_pred Cccchhhhhhhhhhhcc-CCcceeEEEe------ecCCC Q lcl|NC_018085. 1 MKIKYKNVIYDIVSVIP-TEKHTLSIMW------KRGGM 32 (34) Q Consensus 1 mkikyknviydivsvip-tekhtlsimw------krggm 32 (34) |+|.|++.+|+|.+|++ .+++-.-|.- .||-- T Consensus 79 mRV~~~gr~y~I~~V~d~~~~~r~Lic~e~~i~~~~~~~ 117 (117) T protein:vir:57 79 WQIVTTAGVFTVRVVDRVSHADRILITGEADIRHDRTEP 117 (117) T ss_pred CEEEECCEEEEEEeccCCCCCccEEEEEecccccccCCC Confidence 99999999999999997 3444433332 22222 No 28 >protein:vir:4459 Length: 134 # NCBI annotation: hypothetical protein # Family: family:all:116 # ACLAME annotation(s): phi:0000012 - phage head tail joining # MgeID: mge:96 # MgeName: ST64B # Cross-refs: genbank:acc:NP_700382;genbank:gi:23505454;genbank:GeneID:955661 Probab=40.71 E-value=0.08 Score=26.59 Aligned_cols=34 Identities=21% Similarity=0.248 Sum_probs=27.3 Q ss_pred CccchhhhhhhhhhhccC-Ccc-eeEEEeecCCCC-C Q lcl|NC_018085. 1 MKIKYKNVIYDIVSVIPT-EKH-TLSIMWKRGGMN-G 34 (34) Q Consensus 1 mkikyknviydivsvipt-ekh-tlsimwkrggmn-g 34 (34) |.|.|++-+|+|.+|.|. ++| .|.|+-+..|-+ | T Consensus 87 ~RI~~~g~~y~I~~I~~~~~~~~~L~i~c~evg~~~g 123 (134) T protein:vir:44 87 HEVLHDDISYRVKRVRDLNGKRRFLLIECEALGTDNG 123 (134) T ss_pred cEEEECCeEEEEEEecCCCcCCcEEEEEEEEeeecCC Confidence 999999999999999864 766 588888875543 2 No 29 >protein:vir:80342 Length: 108 # NCBI annotation: gp9, phage head-tail adaptor, putative # Family: family:all:116 # ACLAME annotation(s): phi:0000012 - phage head tail joining # MgeID: mge:1881 # MgeName: phi644-2 # Cross-refs: genbank:acc:YP_001111088;genbank:gi:134288641;genbank:GeneID:4960589 Probab=39.30 E-value=0.086 Score=26.44 Aligned_cols=34 Identities=32% Similarity=0.604 Sum_probs=25.4 Q ss_pred CccchhhhhhhhhhhccCCcce-eEEEeecCCCCC Q lcl|NC_018085. 1 MKIKYKNVIYDIVSVIPTEKHT-LSIMWKRGGMNG 34 (34) Q Consensus 1 mkikyknviydivsviptekht-lsimwkrggmng 34 (34) |.|.|++.+|+|.+|.|.+++. |.|+-+.|=-+= T Consensus 74 ~Ri~~~g~~y~I~~v~~~~~~~~l~i~~~e~v~~~ 108 (108) T protein:vir:80 74 MRVRYDGRLYDITAVLPARKRGYLDLSVKVGEKYV 108 (108) T ss_pred cEEEECCeEEEEEeeccCCCCCEEEEEEEeeeecC Confidence 9999999999999999988765 555555332222 No 30 >protein:vir:100226 Length: 114 # NCBI annotation: putative head-tail joining protein # Family: family:all:1030 # MgeID: mge:1524 # MgeName: phi AT3 # Cross-refs: genbank:acc:YP_025033;genbank:gi:48697266;genbank:GeneID:2948324 Probab=39.02 E-value=0.098 Score=26.11 Aligned_cols=31 Identities=19% Similarity=0.552 Sum_probs=23.5 Q ss_pred CccchhhhhhhhhhhccCCcce------eEE-EeecCC Q lcl|NC_018085. 1 MKIKYKNVIYDIVSVIPTEKHT------LSI-MWKRGG 31 (34) Q Consensus 1 mkikyknviydivsviptekht------lsi-mwkrgg 31 (34) |+++|++.+|||+++.|.|... +.+ --++|+ T Consensus 77 m~v~~~g~~Y~Iv~IspDd~~~~~~yD~iTlkk~~~ga 114 (114) T protein:vir:10 77 KQARLDGIVYDISDISPDDSNDAIRYDYLTLVKTTKGA 114 (114) T ss_pred cEEEECCeEEEEEEeCCCCccCcceeeeEEEEEEecCC Confidence 9999999999999999988643 222 234555 No 31 >protein:vir:102144 Length: 113 # NCBI annotation: phage head-tail adaptor, putative # Family: family:all:3858 # MgeID: mge:1641 # MgeName: phiSM101 # Cross-refs: genbank:acc:YP_699939;genbank:gi:110804032;genbank:GeneID:4206688 Probab=28.54 E-value=0.21 Score=24.26 Aligned_cols=31 Identities=19% Similarity=0.266 Sum_probs=23.2 Q ss_pred Cccchhhhhhhhhhhcc-CCcce-eEEEeecCC Q lcl|NC_018085. 1 MKIKYKNVIYDIVSVIP-TEKHT-LSIMWKRGG 31 (34) Q Consensus 1 mkikyknviydivsvip-tekht-lsimwkrgg 31 (34) |.|.|++.+|+|.||.| .++|. |.|.=+.=- T Consensus 81 ~ri~~~g~~y~I~~i~~~~~~~~~l~i~~~~v~ 113 (113) T protein:vir:10 81 FRINFKGHYYKLEYVDDYDQGHEWVDLKAKIIS 113 (113) T ss_pred CeEEECCeEEEEEecCCcccCCeEEEEEEEEeC Confidence 89999999999999985 46663 555544433 No 32 >protein:vir:1242 Length: 111 # NCBI annotation: similar to phage Spp1 gp16 # Family: family:all:788 # MgeID: mge:25 # MgeName: phi ETA # Cross-refs: genbank:acc:NP_510941;genbank:gi:17426275;genbank:GeneID:927372 Probab=27.89 E-value=0.19 Score=24.48 Aligned_cols=34 Identities=18% Similarity=0.278 Sum_probs=25.3 Q ss_pred Cccchhhhhhhhhhh--ccCCcceeEEEeecCCCCC Q lcl|NC_018085. 1 MKIKYKNVIYDIVSV--IPTEKHTLSIMWKRGGMNG 34 (34) Q Consensus 1 mkikyknviydivsv--iptekhtlsimwkrggmng 34 (34) |+|+|+.-||+|+|. =+.++|++.+.--+---+| T Consensus 74 mri~y~gRif~I~s~~vD~~g~hei~~~~~~~~~~~ 109 (111) T protein:vir:12 74 TLFNYEGKTYEVVGEPVDQGGQHEINLTRLRVRSIG 109 (111) T ss_pred ceEEECCeEEEEeeeecCcccceeeeeeeeeecccC Confidence 999999999999996 5678898765543333333 No 33 >protein:vir:100134 Length: 109 # NCBI annotation: gp8 # Family: family:all:116 # ACLAME annotation(s): phi:0000012 - phage head tail joining # MgeID: mge:1639 # MgeName: phi1026b # Cross-refs: genbank:acc:NP_945038;genbank:gi:38707898;genbank:GeneID:2744181 Probab=25.30 E-value=0.18 Score=24.64 Aligned_cols=32 Identities=25% Similarity=0.499 Sum_probs=22.1 Q ss_pred CccchhhhhhhhhhhccCCccee-EEEee--cCCC Q lcl|NC_018085. 1 MKIKYKNVIYDIVSVIPTEKHTL-SIMWK--RGGM 32 (34) Q Consensus 1 mkikyknviydivsviptekhtl-simwk--rggm 32 (34) |.|.|++.+|+|.+|.|.+++.- .|.-+ .-+. T Consensus 75 ~ri~~~g~~y~I~~v~~d~~~~~~~l~~~~~e~~~ 109 (109) T protein:vir:10 75 MRIRHDGRLYDIAAVLPNRRQGYVDLSVKVGEKYV 109 (109) T ss_pred cEEEECCeEEEEeecCCCCCCCeEEEEEEEEEeeC Confidence 99999999999999988776632 22222 1122 No 34 >protein:vir:105035 Length: 112 # NCBI annotation: Gp9 # Family: family:all:11389 # MgeID: mge:1465 # MgeName: phiKO2 # Cross-refs: genbank:acc:YP_006589;genbank:gi:46402095;genbank:GeneID:2777900 Probab=20.96 E-value=0.32 Score=23.27 Aligned_cols=32 Identities=22% Similarity=0.421 Sum_probs=20.0 Q ss_pred CccchhhhhhhhhhhccCCcceeEEEee-cCCCC---C Q lcl|NC_018085. 1 MKIKYKNVIYDIVSVIPTEKHTLSIMWK-RGGMN---G 34 (34) Q Consensus 1 mkikyknviydivsviptekhtlsimwk-rggmn---g 34 (34) |+|.|++.+|+|.+|-+... .. +|=. |+.-. | T Consensus 76 mRI~~~gr~y~I~~Vd~~~~-r~-llc~E~~~~~~~~~ 111 (112) T protein:vir:10 76 WKITTKDLVYTVRNIDRKTD-QI-IITGEADGRHDRTG 111 (112) T ss_pred cEEEECCeEEEEecccCCCC-cE-EEEeecccccccCC Confidence 99999999999999865442 22 3322 22111 1 Done!