Query lcl|NC_015456.1_cdsid_YP_004414854.1 [gene=Shfl1p38] [protein=hypothetical protein] [protein_id=YP_004414854.1] [location=17844..18257] Match_columns 137 No_of_seqs 101 out of 109 Neff 6.3 Searched_HMMs 1612 Date Thu Nov 7 13:35:36 2013 Command /home/guerois/workspace/virfam/python/lib/hhsearch//hhsearch2 -i .//seq/seq_35 -d /home/guerois/workspace/virfam/python/profile_database/capsid_neck_tail.hhm -glob -cpu 7 -o .//seq/HHR/seq_35_vs_rec_db.hhr No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM 1 protein:vir:107702 Length: 136 100.0 7.5E-53 4.7E-56 306.3 11.1 136 1-136 1-136 (136) 2 protein:vir:79640 Length: 134 100.0 6.5E-51 4E-54 295.7 10.9 134 1-137 1-134 (134) 3 protein:vir:5256 Length: 119 # 100.0 1.1E-45 7.1E-49 267.0 11.7 118 7-128 1-119 (119) 4 protein:vir:107756 Length: 147 100.0 1.3E-44 7.8E-48 261.3 12.1 129 1-137 1-138 (147) 5 protein:vir:96108 Length: 155 100.0 1.3E-43 8.3E-47 255.6 11.8 132 5-137 1-147 (155) 6 protein:vir:99570 Length: 153 100.0 4E-43 2.5E-46 253.0 12.4 134 1-137 1-145 (153) 7 protein:vir:103283 Length: 125 100.0 1.7E-42 1.1E-45 249.5 8.1 125 13-137 1-125 (125) 8 protein:vir:94064 Length: 167 100.0 9.8E-42 6.1E-45 245.4 11.8 134 1-137 1-148 (167) 9 protein:vir:106739 Length: 158 100.0 1.3E-41 8E-45 244.7 12.0 134 1-137 1-144 (158) 10 protein:vir:78595 Length: 158 100.0 1.3E-41 8E-45 244.7 12.0 134 1-137 1-144 (158) 11 protein:vir:101559 Length: 158 100.0 2.3E-41 1.4E-44 243.3 11.5 134 1-137 1-144 (158) 12 protein:vir:3639 Length: 158 # 100.0 2.3E-41 1.4E-44 243.3 11.5 134 1-137 1-144 (158) 13 protein:vir:104344 Length: 132 100.0 1.7E-41 1.1E-44 244.1 9.2 131 1-137 1-131 (132) 14 protein:vir:80036 Length: 111 99.6 3.7E-19 2.3E-22 121.6 8.1 110 6-132 1-111 (111) 15 protein:vir:102961 Length: 131 95.9 0.00011 6.6E-08 42.4 7.7 107 9-121 1-131 (131) 16 protein:vir:43 Length: 131 # N 91.5 0.0084 5.2E-06 32.0 9.3 115 1-137 1-130 (131) 17 protein:vir:98900 Length: 132 90.7 0.015 9.1E-06 30.6 9.8 116 1-137 1-131 (132) 18 protein:vir:105776 Length: 133 89.8 0.01 6.4E-06 31.5 8.2 111 6-137 1-129 (133) 19 protein:vir:80389 Length: 172 88.5 0.032 2E-05 28.8 11.1 125 1-134 1-172 (172) 20 protein:vir:80967 Length: 131 87.8 0.03 1.9E-05 28.9 9.3 115 1-137 1-130 (131) 21 protein:vir:106583 Length: 105 86.4 0.033 2E-05 28.7 8.7 100 1-126 2-105 (105) 22 protein:vir:79050 Length: 133 82.3 0.034 2.1E-05 28.7 6.9 113 1-122 1-133 (133) 23 protein:vir:5976 Length: 102 # 80.0 0.024 1.5E-05 29.4 5.3 93 1-119 1-102 (102) 24 protein:vir:99922 Length: 165 76.6 0.036 2.2E-05 28.5 5.1 119 1-137 1-147 (165) 25 protein:vir:80668 Length: 153 72.0 0.12 7.3E-05 25.7 6.8 112 1-137 1-139 (153) 26 protein:vir:96128 Length: 98 # 70.6 0.014 8.5E-06 30.8 1.3 92 1-115 1-98 (98) 27 protein:vir:94955 Length: 170 70.5 0.21 0.00013 24.3 10.8 118 1-134 10-170 (170) 28 protein:vir:95176 Length: 172 68.4 0.24 0.00015 24.0 9.8 120 1-137 13-171 (172) 29 protein:vir:96281 Length: 104 66.2 0.046 2.8E-05 27.9 3.2 97 1-128 1-104 (104) 30 protein:vir:95891 Length: 104 66.2 0.046 2.8E-05 27.9 3.2 97 1-128 1-104 (104) 31 protein:vir:97329 Length: 104 65.7 0.048 3E-05 27.8 3.2 97 1-128 1-104 (104) 32 protein:vir:9706 Length: 100 # 65.4 0.09 5.6E-05 26.3 4.7 87 1-90 1-100 (100) 33 protein:vir:95004 Length: 169 58.2 0.42 0.00026 22.7 10.9 122 1-134 1-169 (169) 34 protein:vir:94798 Length: 104 58.1 0.19 0.00012 24.6 5.1 97 1-128 1-104 (104) 35 protein:vir:96831 Length: 98 # 55.7 0.082 5.1E-05 26.5 2.7 92 1-115 1-98 (98) 36 protein:vir:105327 Length: 104 55.5 0.23 0.00014 24.1 5.1 97 1-128 1-104 (104) 37 protein:vir:107119 Length: 104 55.5 0.23 0.00014 24.1 5.1 97 1-128 1-104 (104) 38 protein:vir:78383 Length: 169 53.6 0.53 0.00033 22.1 11.0 122 1-134 1-169 (169) 39 protein:vir:7410 Length: 107 # 53.2 0.27 0.00017 23.7 5.0 89 1-109 1-107 (107) 40 protein:vir:106596 Length: 128 52.3 0.56 0.00035 22.0 8.9 107 1-137 13-126 (128) 41 protein:vir:93740 Length: 104 49.7 0.11 6.8E-05 25.9 2.3 97 1-128 1-104 (104) 42 protein:vir:9928 Length: 118 # 48.1 0.68 0.00042 21.5 6.6 104 1-128 1-118 (118) 43 protein:vir:95071 Length: 104 46.7 0.13 8.3E-05 25.4 2.3 97 1-128 1-104 (104) 44 protein:vir:94492 Length: 104 46.7 0.13 8.3E-05 25.4 2.3 97 1-128 1-104 (104) 45 protein:vir:97430 Length: 104 46.7 0.13 8.3E-05 25.4 2.3 97 1-128 1-104 (104) 46 protein:vir:1241 Length: 104 # 46.7 0.13 8.3E-05 25.4 2.3 97 1-128 1-104 (104) 47 protein:vir:1026 Length: 107 # 42.1 0.69 0.00043 21.5 5.5 91 1-109 1-107 (107) 48 protein:vir:1640 Length: 132 # 40.7 0.64 0.0004 21.7 5.1 112 1-134 1-132 (132) 49 protein:vir:4998 Length: 106 # 39.4 1 0.00063 20.5 7.2 92 1-103 1-106 (106) 50 protein:vir:4788 Length: 130 # 38.5 0.96 0.0006 20.7 5.7 113 1-134 1-130 (130) 51 protein:vir:94761 Length: 132 38.2 0.93 0.00058 20.8 5.6 109 1-134 1-132 (132) 52 protein:vir:102158 Length: 99 37.4 0.66 0.00041 21.6 4.6 93 6-129 1-99 (99) 53 protein:vir:3615 Length: 110 # 36.9 1.1 0.00071 20.3 6.8 101 7-137 1-108 (110) 54 protein:vir:100103 Length: 120 36.4 1.2 0.00073 20.2 7.4 94 1-127 1-120 (120) 55 protein:vir:4954 Length: 104 # 36.1 0.54 0.00034 22.0 3.9 92 1-102 1-104 (104) 56 protein:vir:1887 Length: 108 # 35.1 1.3 0.00078 20.0 7.4 95 1-108 3-108 (108) 57 protein:vir:192 Length: 108 # 35.1 1.3 0.00078 20.0 7.4 95 1-108 3-108 (108) 58 protein:vir:9877 Length: 114 # 34.9 1.3 0.00078 20.0 9.2 104 1-128 1-114 (114) 59 protein:vir:81069 Length: 115 34.6 1.3 0.0008 20.0 7.4 84 6-124 1-115 (115) 60 protein:vir:3970 Length: 110 # 30.5 1.6 0.00097 19.5 8.7 101 7-137 1-108 (110) 61 protein:vir:81159 Length: 95 # 30.0 1.6 0.001 19.4 5.6 88 1-109 1-95 (95) 62 protein:vir:79701 Length: 144 29.1 1.7 0.001 19.3 7.2 113 1-131 1-144 (144) 63 protein:vir:4831 Length: 105 # 27.0 1.2 0.00075 20.1 4.2 93 1-103 1-105 (105) 64 protein:vir:9576 Length: 131 # 26.9 1.9 0.0012 19.1 5.3 111 1-136 1-131 (131) 65 protein:vir:741 Length: 110 # 25.9 2 0.0012 18.9 8.3 101 7-137 1-108 (110) 66 protein:vir:99517 Length: 124 24.2 2.2 0.0014 18.7 7.8 112 1-137 1-122 (124) 67 protein:vir:100211 Length: 114 23.6 2.3 0.0014 18.6 6.8 97 1-103 1-114 (114) 68 protein:vir:4857 Length: 104 # 23.5 1.8 0.0011 19.2 4.4 92 1-102 1-104 (104) 69 protein:vir:97069 Length: 115 23.3 2.3 0.0014 18.6 6.5 84 6-124 1-115 (115) 70 protein:vir:105899 Length: 116 22.0 1.8 0.0011 19.2 4.2 104 7-122 1-116 (116) 71 protein:vir:94126 Length: 116 22.0 1.8 0.0011 19.2 4.2 104 7-122 1-116 (116) 72 protein:vir:94507 Length: 113 22.0 2.5 0.0016 18.4 7.9 100 7-128 1-113 (113) 73 protein:vir:3992 Length: 107 # 20.5 2.8 0.0017 18.2 5.0 91 1-109 1-107 (107) 74 protein:vir:10365 Length: 115 20.2 2.8 0.0017 18.1 7.7 84 6-126 1-115 (115) No 1 >protein:vir:107702 Length: 136 # NCBI annotation: hypothetical protein # Family: family:all:5122 # MgeID: mge:1518 # MgeName: T1 # Cross-refs: genbank:acc:YP_003900;genbank:gi:45686316;genbank:GeneID:2773042 Probab=100.00 E-value=7.5e-53 Score=306.34 Aligned_cols=136 Identities=96% Similarity=1.434 Sum_probs=132.9 Q ss_pred CCccccchHHHHHHHHhhhccCCCHHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHhccccccccccccccccc Q lcl|NC_015456. 1 MNQENLIAVIEQMRKLVPALRKVPDETLYAWVEMAELFVCQKTFKDAYVKALALYALHLAFLDGALKGEDEDIESYSRRV 80 (137) Q Consensus 1 m~~~~~~~~i~~Fr~~~PeF~~vpD~~i~~~l~~A~~~v~~~~~g~~~~~a~~ll~AH~l~l~~~~~~~~~~~~~~~g~v 80 (137) ||+|-.|++||+||++||||+|+||++|+.|+++|+++||++.|||.++++++|||||+|+++++.+++++++.+.+||| T Consensus 1 ~~~~~~~~~ve~fR~l~PeF~dvPde~i~~~~d~A~~~v~~~~~Gk~y~~al~lltAHLl~l~~~~~~~~~~~~~~s~rv 80 (136) T protein:vir:10 1 MNQETLIAVVEQMRKLVPALRKVPDETLYAWVEMAELFVCQKTFKDAYVKALALYALHLAFLDGALKGEDEDLESYSRRV 80 (136) T ss_pred CCchHHHHHHHHHHHhccccccCCHHHHHHHHHHHHHhhcCCCChhHHHHHHHHHHHHHHhcccccccccccccccccce Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred eeeeeccceeEeeecccCCcchhhhhcCHHHHHHHHHHHHhcCCCccccCCccccc Q lcl|NC_015456. 81 TSFSLSGEFSQTFGEVTKNQSENMMLSTPWGKIFEQLKARRRGRFALMTGLRGGCH 136 (137) Q Consensus 81 ~S~s~~G~vSvSy~~~~~~~~~~wl~~T~YGq~y~~L~r~~g~Gg~~~~g~~~~c~ 136 (137) +|++.+|||||||+++++++|+.||++|||||+||+|+|++++|+.++||+++||| T Consensus 81 ~ssat~GevSVS~a~~s~~~s~~WL~~TpyGq~y~aL~k~~~gGf~l~t~~~~~c~ 136 (136) T protein:vir:10 81 TSFSLSGEFSQTFGEVTKNQSGDMMLSTPWGKMFEQLKARRRGRFALMTGLRGGCH 136 (136) T ss_pred ehheeccceeEeeccccCchhhHhhhcCHHHHHHHHHHhhcccchhhhhcccccCC Confidence 99887899999999988999999999999999999999999999999999999999 No 2 >protein:vir:79640 Length: 134 # NCBI annotation: gp38 # Family: family:all:5122 # MgeID: mge:1872 # MgeName: TLS # Cross-refs: genbank:acc:YP_001285527;genbank:gi:148734510;genbank:GeneID:5219998 Probab=100.00 E-value=6.5e-51 Score=295.72 Aligned_cols=134 Identities=51% Similarity=0.908 Sum_probs=128.6 Q ss_pred CCccccchHHHHHHHHhhhccCCCHHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHhccccccccccccccccc Q lcl|NC_015456. 1 MNQENLIAVIEQMRKLVPALRKVPDETLYAWVEMAELFVCQKTFKDAYVKALALYALHLAFLDGALKGEDEDIESYSRRV 80 (137) Q Consensus 1 m~~~~~~~~i~~Fr~~~PeF~~vpD~~i~~~l~~A~~~v~~~~~g~~~~~a~~ll~AH~l~l~~~~~~~~~~~~~~~g~v 80 (137) || ++++||+||++||||+||||++|+.|+++|+++||+++|||.++++++|||||+|+|+++.+++++++.+.+|+| T Consensus 1 m~---d~~~ve~Fr~l~PeF~~vpde~l~~~~~~A~~~i~~~~~g~~~~~al~lltAHLl~l~~~~~~~g~~~~~~~grv 77 (134) T protein:vir:79 1 MN---DIEILEQIYKIAPAFKKVDPELIQAWIELAKDFVCEKHFKDKYFRAVALYTLHLMTLDGAMKQESESVESYSHRI 77 (134) T ss_pred Cc---hHHHHHHHHHhccccccCCHHHHHHHHHHhhhhhcCCCCChHHHHHHHHHHHHHHhhcccccccccccccccchh Confidence 64 567899999999999999999999999999999999999999999999999999999998888888888899999 Q ss_pred eeeeeccceeEeeecccCCcchhhhhcCHHHHHHHHHHHHhcCCCccccCCcccccC Q lcl|NC_015456. 81 TSFSLSGEFSQTFGEVTKNQSENMMLSTPWGKIFEQLKARRRGRFALMTGLRGGCHQ 137 (137) Q Consensus 81 ~S~s~~G~vSvSy~~~~~~~~~~wl~~T~YGq~y~~L~r~~g~Gg~~~~g~~~~c~~ 137 (137) +|++++|+|||||++|++++|++||++|||||+||+|+|++++|+.+++++++|||| T Consensus 78 ~ssst~G~vSvS~a~ps~~~~~~Wl~~TpYGq~y~~L~k~~~GGf~~~t~~~~~~~r 134 (134) T protein:vir:79 78 ASFSLTGEFSQTFSKVSDDTSGNTLRQTPWGKMYEVLNKKKGGGFGLTTAFHRRCSR 134 (134) T ss_pred hhhhhhcceeeeccCcccchhHHHHhcCHHHHHHHHHHHhhccchHhhhhccccCCC Confidence 998889999999999888999999999999999999999999999999999999999 No 3 >protein:vir:5256 Length: 119 # NCBI annotation: hypothetical protein # Family: family:all:664 # MgeID: mge:117 # MgeName: Aaphi23 # Cross-refs: genbank:acc:NP_852761;genbank:gi:31544036;uniprot:Q7Y5T9;genbank:GeneID:2753553 Probab=100.00 E-value=1.1e-45 Score=266.96 Aligned_cols=118 Identities=16% Similarity=0.183 Sum_probs=108.5 Q ss_pred chHHHHHHHHhhhccCCCHHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHhccccccccccccccccceeeeec Q lcl|NC_015456. 7 IAVIEQMRKLVPALRKVPDETLYAWVEMAELFVCQKTFKDAYVKALALYALHLAFLDGALKGEDEDIESYSRRVTSFSLS 86 (137) Q Consensus 7 ~~~i~~Fr~~~PeF~~vpD~~i~~~l~~A~~~v~~~~~g~~~~~a~~ll~AH~l~l~~~~~~~~~~~~~~~g~v~S~s~~ 86 (137) +++|++||++||||++|||++|+.||++|++++++++||++++++++|||||+|+|++.... ++++.+|+|+|+| + T Consensus 1 m~t~~~Fr~~~PeF~~~pd~~i~~~l~~A~~~l~~~~~g~~~~~~~~L~~AH~l~l~~~~~~---~~g~~~g~v~S~s-~ 76 (119) T protein:vir:52 1 MPLTEDFLLRYTEFGKTDAKRIGLFLSDAQAEVSKVQWGKLYDRGVMALTAHLLKLSADAEI---SGGAANRNLASES-A 76 (119) T ss_pred CCcHHHHHHhhhhccCCCHHHHHHHHHHHHHhhCCcCCchHHHHHHHHHHHHHHHhhhhhhc---cccccccceeeee-e Confidence 78899999999999999999999999999999999999999999999999999999765433 2345689999999 6 Q ss_pred cceeEeeeccc-CCcchhhhhcCHHHHHHHHHHHHhcCCCccc Q lcl|NC_015456. 87 GEFSQTFGEVT-KNQSENMMLSTPWGKIFEQLKARRRGRFALM 128 (137) Q Consensus 87 G~vSvSy~~~~-~~~~~~wl~~T~YGq~y~~L~r~~g~Gg~~~ 128 (137) |+|||||+.+. .+++++||++||||||||+|+|++|+|+++. T Consensus 77 G~vSvS~~~~~~~~~~~~w~~~T~YG~~y~~L~r~~g~Gg~Va 119 (119) T protein:vir:52 77 GELSVSYTAPISANGSDDFYQLTAYGQEYLRLRRLIGVGVMVA 119 (119) T ss_pred cceeeeeeccccCCcchhhhhcCHHHHHHHHHHHHhcCCCcCC Confidence 99999999875 4789999999999999999999999999998 No 4 >protein:vir:107756 Length: 147 # NCBI annotation: gp21 # Family: family:all:664 # MgeID: mge:1520 # MgeName: BcepB1A # Cross-refs: genbank:acc:YP_024869;genbank:gi:48697511;genbank:GeneID:2948377 Probab=100.00 E-value=1.3e-44 Score=261.27 Aligned_cols=129 Identities=20% Similarity=0.204 Sum_probs=115.1 Q ss_pred CCccccchHHHHHHHHhhhccC---CCHHHHHHHHHHHHHHhCCCCC-----chHHHHHHHHHHHHHHHHhccccccccc Q lcl|NC_015456. 1 MNQENLIAVIEQMRKLVPALRK---VPDETLYAWVEMAELFVCQKTF-----KDAYVKALALYALHLAFLDGALKGEDED 72 (137) Q Consensus 1 m~~~~~~~~i~~Fr~~~PeF~~---vpD~~i~~~l~~A~~~v~~~~~-----g~~~~~a~~ll~AH~l~l~~~~~~~~~~ 72 (137) |..-.+ |++||++||||+| +||++|+.||++|++++|+++| |++++++++|||||+|+|+++... T Consensus 1 m~v~fd---~~~Fr~~fPeFad~~~~pd~~i~~~l~~A~~~l~~~~~~~~~~g~~~~~~l~Ll~AHll~l~~~~~~---- 73 (147) T protein:vir:10 1 MDHTLD---ITKFRALFPEFNNDVKYPDALLEQWYAVAGEYLGLTDYACGLNGNTLDLALMQLTAHLMKSATILSS---- 73 (147) T ss_pred CceecC---HHHHHHhcccccCCccCCHHHHHHHHHHHHHhhccccCCcccChhhHHHHHHHHHHHHHHHHHhhcc---- Confidence 877433 5899999999986 7999999999999999999999 899999999999999999765432 Q ss_pred cccccccceeeeeccceeEeeeccc-CCcchhhhhcCHHHHHHHHHHHHhcCCCccccCCcccccC Q lcl|NC_015456. 73 IESYSRRVTSFSLSGEFSQTFGEVT-KNQSENMMLSTPWGKIFEQLKARRRGRFALMTGLRGGCHQ 137 (137) Q Consensus 73 ~~~~~g~v~S~s~~G~vSvSy~~~~-~~~~~~wl~~T~YGq~y~~L~r~~g~Gg~~~~g~~~~c~~ 137 (137) +++++|+|+|+| +|+|||||+.++ .+++++||++||||||||+|+|++|+|++|+||.++|.+= T Consensus 74 g~g~~G~v~Sas-~G~VSVSy~~~~~~~~~~~w~~~T~YGq~y~~l~~~~~~Gg~vvgG~p~r~a~ 138 (147) T protein:vir:10 74 NKGAPMVMTSAT-IDKVSISTLAPPIKNGWQYWLSTTPYGQMLWALLSMRSSGGFVYGGSPELSGY 138 (147) T ss_pred CCCcccceeeee-ecceeeeeecCCCCCcchhhhhcCHHHHHHHHHHHhhCccceecCCCCccccc Confidence 334689999999 699999999875 5789999999999999999999999999999999888765 No 5 >protein:vir:96108 Length: 155 # NCBI annotation: hypothetical protein ORF025 # Family: family:all:664 # MgeID: mge:1597 # MgeName: F8 # Cross-refs: genbank:acc:YP_001294442;genbank:gi:149408339;genbank:GeneID:5237227 Probab=100.00 E-value=1.3e-43 Score=255.62 Aligned_cols=132 Identities=20% Similarity=0.130 Sum_probs=113.7 Q ss_pred ccchHHHHHHHHhhhccC---CCHHHHHHHHHHHHHHhCC------CCCchHHHHHHHHHHHHHHHHhccccccc----- Q lcl|NC_015456. 5 NLIAVIEQMRKLVPALRK---VPDETLYAWVEMAELFVCQ------KTFKDAYVKALALYALHLAFLDGALKGED----- 70 (137) Q Consensus 5 ~~~~~i~~Fr~~~PeF~~---vpD~~i~~~l~~A~~~v~~------~~~g~~~~~a~~ll~AH~l~l~~~~~~~~----- 70 (137) ...=.+++||++||||+| +||++|++||++|++++++ .+||++++++++|||||+|+|..+....+ T Consensus 1 ~v~fd~~~FR~~fPeFad~~~~Pd~~i~~~l~~A~~~l~~~~~~s~~~~g~~~~~~l~Ll~AH~l~L~~~~~~gaa~~g~ 80 (155) T protein:vir:96 1 MVIFDEQKFRTLFPEFADPASYPAVRLQLYFDIACEFISDRDSPYRILNGKALEACLYLLTAHLLSLSTMQVQGAAGGGV 80 (155) T ss_pred CcccCHHHHHHhCccccCcccCCHHHHHHHHHHHHHhhcCCCccccccChHHHHHHHHHHHHHHHHHHHHhhhhcccccc Confidence 222258999999999985 7999999999999999975 35789999999999999999976543321 Q ss_pred cccccccccceeeeeccceeEeeecccC-CcchhhhhcCHHHHHHHHHHHHhcCCCccccCCcccccC Q lcl|NC_015456. 71 EDIESYSRRVTSFSLSGEFSQTFGEVTK-NQSENMMLSTPWGKIFEQLKARRRGRFALMTGLRGGCHQ 137 (137) Q Consensus 71 ~~~~~~~g~v~S~s~~G~vSvSy~~~~~-~~~~~wl~~T~YGq~y~~L~r~~g~Gg~~~~g~~~~c~~ 137 (137) ..+++.+|+|+|+| +|+|||||+++++ +++++||++||||||||+|+|++++|++|++|.++|..- T Consensus 81 ~~~g~~~G~vsSas-~G~VSVSy~~~~~~~~~~~w~~~T~YGq~f~~l~~~~~~Gg~~vgG~per~~~ 147 (155) T protein:vir:96 81 TAGGTQGGFITSAT-VGEVSVAKLAPPAKNGWQWWLSGTPYGQELWALLSVKAVGGFYIGGLPERRGF 147 (155) T ss_pred ccccccccceeece-ecceeeeeecCCCCCchhHHhhcCHHHHHHHHHHHHhcccccccCCCCccccc Confidence 23456789999999 6999999999764 789999999999999999999999999999999988875 No 6 >protein:vir:99570 Length: 153 # NCBI annotation: hypothetical protein # Family: family:all:664 # MgeID: mge:1544 # MgeName: BcepF1 # Cross-refs: genbank:acc:YP_001039799;genbank:gi:126011049;genbank:GeneID:4818265 Probab=100.00 E-value=4e-43 Score=253.05 Aligned_cols=134 Identities=19% Similarity=0.128 Sum_probs=115.5 Q ss_pred CCccccchHHHHHHHHhhhccC---CCHHHHHHHHHHHHHHhCCCC------CchHHHHHHHHHHHHHHHHhccccc-cc Q lcl|NC_015456. 1 MNQENLIAVIEQMRKLVPALRK---VPDETLYAWVEMAELFVCQKT------FKDAYVKALALYALHLAFLDGALKG-ED 70 (137) Q Consensus 1 m~~~~~~~~i~~Fr~~~PeF~~---vpD~~i~~~l~~A~~~v~~~~------~g~~~~~a~~ll~AH~l~l~~~~~~-~~ 70 (137) |.. ..=-+++||++||||+| +||++|+.||++|++++++.+ +|+.++++++|||||+|+|+..... .. T Consensus 1 m~~--~~fd~~~Fr~~fPeFad~~~~Pd~~i~~~l~~A~~~l~~~~~~~~~~~g~~~~~~l~Ll~AH~l~L~~~~~~~~~ 78 (153) T protein:vir:99 1 MAD--PVYNDGLFRIMYPEFADQEKYPPEVIEIYYDTATLFITGSMFPCAALSGKQLVGALNMLTAHLMSLSMQRSQTAL 78 (153) T ss_pred CCc--ccCChHHHHHhcccccCccccCHHHHHHHHHHHHHhhcCccccccccChHHHHHHHHHHHHHHHHHHhhhhcccc Confidence 643 33458999999999986 799999999999999998765 4799999999999999999654333 23 Q ss_pred cccccccccceeeeeccceeEeeecccC-CcchhhhhcCHHHHHHHHHHHHhcCCCccccCCcccccC Q lcl|NC_015456. 71 EDIESYSRRVTSFSLSGEFSQTFGEVTK-NQSENMMLSTPWGKIFEQLKARRRGRFALMTGLRGGCHQ 137 (137) Q Consensus 71 ~~~~~~~g~v~S~s~~G~vSvSy~~~~~-~~~~~wl~~T~YGq~y~~L~r~~g~Gg~~~~g~~~~c~~ 137 (137) +++++++|+|+|+| +|+|||||+++++ +++++||++||||||||+|+|++++|+.|++|+++|..- T Consensus 79 ~a~~~~~G~vsSas-~G~VSVSy~~~~~~~~~~~w~~~T~YGq~fw~l~~~~~~Gg~v~gg~pe~~~~ 145 (153) T protein:vir:99 79 GATNDQGGYTLSAT-IGEVSVSKMAPPAKDGWEFWLAQTPYGQALWALLKMLSVGGFAIGGLPERTGF 145 (153) T ss_pred cCCCccccceeeee-ecceeeeeecCCCCCchhHhhhcCHHHHHHHHHHHHhcccccccCCCCccccc Confidence 44556789999999 6999999998864 789999999999999999999999999999999998875 No 7 >protein:vir:103283 Length: 125 # NCBI annotation: hypothetical protein # Family: family:all:5122 # MgeID: mge:1605 # MgeName: JK06 # Cross-refs: genbank:acc:YP_277463;genbank:gi:71834105;genbank:GeneID:3562394 Probab=100.00 E-value=1.7e-42 Score=249.54 Aligned_cols=125 Identities=40% Similarity=0.712 Sum_probs=123.6 Q ss_pred HHHHhhhccCCCHHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHhccccccccccccccccceeeeeccceeEe Q lcl|NC_015456. 13 MRKLVPALRKVPDETLYAWVEMAELFVCQKTFKDAYVKALALYALHLAFLDGALKGEDEDIESYSRRVTSFSLSGEFSQT 92 (137) Q Consensus 13 Fr~~~PeF~~vpD~~i~~~l~~A~~~v~~~~~g~~~~~a~~ll~AH~l~l~~~~~~~~~~~~~~~g~v~S~s~~G~vSvS 92 (137) +|++||+|++||||+|+.|++.|++|||.+.|||.+++|+.|||+|+|.++++.++++.+..+.++||+|.+++|++||| T Consensus 1 mR~l~P~f~~vpdevi~~wid~A~lFVC~~~fg~~~~~Al~lytlHLm~~dga~k~e~~~~~~~s~r~~s~slsGE~Sit 80 (125) T protein:vir:10 1 MRTLYPPLKSQPDDVLNAWIEVAKLFICLDKFGDKQVQALAFYTLHLLSQDIALKTENDSSQTSSERVKSYSLSGEYTIS 80 (125) T ss_pred CccccchhhccCHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHhcccccccccccccccccceeeeeeccceEee Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred eecccCCcchhhhhcCHHHHHHHHHHHHhcCCCccccCCcccccC Q lcl|NC_015456. 93 FGEVTKNQSENMMLSTPWGKIFEQLKARRRGRFALMTGLRGGCHQ 137 (137) Q Consensus 93 y~~~~~~~~~~wl~~T~YGq~y~~L~r~~g~Gg~~~~g~~~~c~~ 137 (137) |+++++++|+.||.+||||+.||+|+|+.++|+.++|++++|||| T Consensus 81 ~~~~s~d~s~~~L~~T~wGk~~~~L~k~~~GgFaL~T~~~~~~cr 125 (125) T protein:vir:10 81 YDTSTAAASSSNLEESSWGKLYIDLMRLKVGRWGLITSGGSRCCR 125 (125) T ss_pred cccccccccccccccCchHHHHHHHHHhcCCceeeeccccccCCC Confidence 999999999999999999999999999999999999999999999 No 8 >protein:vir:94064 Length: 167 # NCBI annotation: hypothetical protein # Family: family:all:664 # MgeID: mge:1493 # MgeName: OP2 # Cross-refs: genbank:acc:YP_453623;genbank:gi:84662659;genbank:GeneID:5142574 Probab=100.00 E-value=9.8e-42 Score=245.41 Aligned_cols=134 Identities=19% Similarity=0.193 Sum_probs=108.6 Q ss_pred CCccccchHHHHHHHHhhhccCCCHHHHHHHHHHHHHHh-CCCCC-----chHHHHHHHHHHHHHHHHhcccccc--ccc Q lcl|NC_015456. 1 MNQENLIAVIEQMRKLVPALRKVPDETLYAWVEMAELFV-CQKTF-----KDAYVKALALYALHLAFLDGALKGE--DED 72 (137) Q Consensus 1 m~~~~~~~~i~~Fr~~~PeF~~vpD~~i~~~l~~A~~~v-~~~~~-----g~~~~~a~~ll~AH~l~l~~~~~~~--~~~ 72 (137) |..= .=.+++||++||||+|+||++|+.||++|+.++ ++.+| ++.++++++|||||+|+|+++.+.. ..+ T Consensus 1 M~~~--~Fd~~~FR~~fPeFa~~Pd~~i~~~l~~A~~~~l~~~~~s~~~~~~~~~~~l~LltAHll~L~~~~~a~~~~~~ 78 (167) T protein:vir:94 1 MAVV--VFDPTAFKLVYPEFVAVPDARLTALFNTVGYTILDNTDASVIVDPLRRAPLLDLLVAHMLALFGYVNADGSITP 78 (167) T ss_pred CCcc--cCChHHHHHhchhcccCCHHHHHHHHHHHHHhhcCCCCcccccchhhHHHHHHHHHHHHHHHhhhhhhhccccc Confidence 6543 336899999999999999999999999998755 54443 4668899999999999997654432 234 Q ss_pred cccccccceeeeeccceeEeeeccc-CCcchhhhhcCHHHHHHHHHHHHhcCCCccccCCc----cccc-C Q lcl|NC_015456. 73 IESYSRRVTSFSLSGEFSQTFGEVT-KNQSENMMLSTPWGKIFEQLKARRRGRFALMTGLR----GGCH-Q 137 (137) Q Consensus 73 ~~~~~g~v~S~s~~G~vSvSy~~~~-~~~~~~wl~~T~YGq~y~~L~r~~g~Gg~~~~g~~----~~c~-~ 137 (137) +++.+|+|+|+| +|+|||||+.+. .++|++||++||||||||+|+|++++|+.+++|+. +|-. | T Consensus 79 ~~g~~G~vsSas-~G~VSVSy~~~~~~~~~~~w~~~T~YGq~fwaL~~~~g~Gg~v~gG~~~~~~~~~~~r 148 (167) T protein:vir:94 79 GTGTVGRVANAS-EGSVSTSLAYSTPTGAGEAWFTQTPYGAMYWAMSAPFRSFHYVAAGLSGVGYSQDYLS 148 (167) T ss_pred ccccchheeecc-ccceeeeeecCCCCCchhhhhhcCHHHHHHHHHHHHhcccccccCCCCCCCCCccccC Confidence 455789999999 699999999886 57889999999999999999999999999888765 2221 1 No 9 >protein:vir:106739 Length: 158 # NCBI annotation: gp08 # Family: family:all:664 # MgeID: mge:1599 # MgeName: Bcep1 # Cross-refs: genbank:acc:NP_944316;genbank:gi:38638615;genbank:GeneID:2657368 Probab=100.00 E-value=1.3e-41 Score=244.74 Aligned_cols=134 Identities=19% Similarity=0.143 Sum_probs=110.1 Q ss_pred CCc--cccchHHHHHHHHhhhccCCCHHHHHHHHHHHHHHhCCCC------CchHHHHHHHHHHHHHHHHhccccccccc Q lcl|NC_015456. 1 MNQ--ENLIAVIEQMRKLVPALRKVPDETLYAWVEMAELFVCQKT------FKDAYVKALALYALHLAFLDGALKGEDED 72 (137) Q Consensus 1 m~~--~~~~~~i~~Fr~~~PeF~~vpD~~i~~~l~~A~~~v~~~~------~g~~~~~a~~ll~AH~l~l~~~~~~~~~~ 72 (137) ||- ....=-+++||++||||+|+||++|+.|+++|++++.+.+ .++.++++++|||||+|+|.+....+ + T Consensus 1 ~~~~~~~v~Fd~a~FR~~fPeFa~~pd~~i~~~~~~A~~~~~~~~~~s~~~~~~~r~~ll~LltAHll~L~~~~~~~--a 78 (158) T protein:vir:10 1 MSTPPYRITFDPAGFIAEYPEFATVATPRLQAMFNQAQTALLDNTGGSPVTDDNVLRELFNMLVAHLLTLFGATPTS--A 78 (158) T ss_pred CCCCCceEEcChHHHHHhchhhccCCHHHHHHHHHHhhhhhcCCCccccccChhHHHHHHHHHHHHHHHHhHhhhcc--c Confidence 653 3333348999999999999999999999999998774432 35678999999999999997543332 3 Q ss_pred cccccccceeeeeccceeEeeeccc--CCcchhhhhcCHHHHHHHHHHHHhcCCCccccCCcccccC Q lcl|NC_015456. 73 IESYSRRVTSFSLSGEFSQTFGEVT--KNQSENMMLSTPWGKIFEQLKARRRGRFALMTGLRGGCHQ 137 (137) Q Consensus 73 ~~~~~g~v~S~s~~G~vSvSy~~~~--~~~~~~wl~~T~YGq~y~~L~r~~g~Gg~~~~g~~~~c~~ 137 (137) +++.+|+|+|+| +|+||||||.++ .++|++||++||||||||+|++++++|+.+++|++++-.- T Consensus 79 ~~g~~G~isSas-~G~VSVS~d~~~~t~~~~~~W~~~T~YG~~fwal~~~~~~Ggy~~gg~pe~~~~ 144 (158) T protein:vir:10 79 NSRPPGRLSSAA-EGTVSSSFEFKLPEGSAIAPWYNQTQYGAMFWMATARYRSARYMVSGGSGIGTA 144 (158) T ss_pred cCCcccceeeee-ecceEEEEeecCccccchhHHhhcCHHHHHHHHHHHHhcccccccccCCcccce Confidence 445799999999 699999999744 4678999999999999999999999999999999666543 No 10 >protein:vir:78595 Length: 158 # NCBI annotation: BcepNY3gp07 # Family: family:all:664 # MgeID: mge:1854 # MgeName: BcepNY3 # Cross-refs: genbank:acc:YP_001294844;genbank:gi:149882907;genbank:GeneID:5291066 Probab=100.00 E-value=1.3e-41 Score=244.74 Aligned_cols=134 Identities=19% Similarity=0.143 Sum_probs=110.1 Q ss_pred CCc--cccchHHHHHHHHhhhccCCCHHHHHHHHHHHHHHhCCCC------CchHHHHHHHHHHHHHHHHhccccccccc Q lcl|NC_015456. 1 MNQ--ENLIAVIEQMRKLVPALRKVPDETLYAWVEMAELFVCQKT------FKDAYVKALALYALHLAFLDGALKGEDED 72 (137) Q Consensus 1 m~~--~~~~~~i~~Fr~~~PeF~~vpD~~i~~~l~~A~~~v~~~~------~g~~~~~a~~ll~AH~l~l~~~~~~~~~~ 72 (137) ||- ....=-+++||++||||+|+||++|+.|+++|++++.+.+ .++.++++++|||||+|+|.+....+ + T Consensus 1 ~~~~~~~v~Fd~a~FR~~fPeFa~~pd~~i~~~~~~A~~~~~~~~~~s~~~~~~~r~~ll~LltAHll~L~~~~~~~--a 78 (158) T protein:vir:78 1 MSTPPYRITFDPAGFIAEYPEFATVATPRLQAMFNQAQTALLDNTGGSPVTDDNVLRELFNMLVAHLLTLFGATPTS--A 78 (158) T ss_pred CCCCCceEEcChHHHHHhchhhccCCHHHHHHHHHHhhhhhcCCCccccccChhHHHHHHHHHHHHHHHHhHhhhcc--c Confidence 653 3333348999999999999999999999999998774432 35678999999999999997543332 3 Q ss_pred cccccccceeeeeccceeEeeeccc--CCcchhhhhcCHHHHHHHHHHHHhcCCCccccCCcccccC Q lcl|NC_015456. 73 IESYSRRVTSFSLSGEFSQTFGEVT--KNQSENMMLSTPWGKIFEQLKARRRGRFALMTGLRGGCHQ 137 (137) Q Consensus 73 ~~~~~g~v~S~s~~G~vSvSy~~~~--~~~~~~wl~~T~YGq~y~~L~r~~g~Gg~~~~g~~~~c~~ 137 (137) +++.+|+|+|+| +|+||||||.++ .++|++||++||||||||+|++++++|+.+++|++++-.- T Consensus 79 ~~g~~G~isSas-~G~VSVS~d~~~~t~~~~~~W~~~T~YG~~fwal~~~~~~Ggy~~gg~pe~~~~ 144 (158) T protein:vir:78 79 NSRPPGRLSSAA-EGTVSSSFEFKLPEGSAIAPWYNQTQYGAMFWMATARYRSARYMVSGGSGIGTA 144 (158) T ss_pred cCCcccceeeee-ecceEEEEeecCccccchhHHhhcCHHHHHHHHHHHHhcccccccccCCcccce Confidence 445799999999 699999999744 4678999999999999999999999999999999666543 No 11 >protein:vir:101559 Length: 158 # NCBI annotation: gp08 # Family: family:all:664 # MgeID: mge:1477 # MgeName: Bcep43 # Cross-refs: genbank:acc:NP_958112;genbank:gi:41057658;genbank:GeneID:2716816 Probab=100.00 E-value=2.3e-41 Score=243.34 Aligned_cols=134 Identities=17% Similarity=0.130 Sum_probs=110.0 Q ss_pred CCc--cccchHHHHHHHHhhhccCCCHHHHHHHHHHHHHH-hCCCCC-----chHHHHHHHHHHHHHHHHhccccccccc Q lcl|NC_015456. 1 MNQ--ENLIAVIEQMRKLVPALRKVPDETLYAWVEMAELF-VCQKTF-----KDAYVKALALYALHLAFLDGALKGEDED 72 (137) Q Consensus 1 m~~--~~~~~~i~~Fr~~~PeF~~vpD~~i~~~l~~A~~~-v~~~~~-----g~~~~~a~~ll~AH~l~l~~~~~~~~~~ 72 (137) ||- ....=-+++||++||||+|+||++|+.||++|+.+ +++.++ ++.++++++|||||+|+|+..... ++ T Consensus 1 ~~~~~~~v~Fd~a~FR~~fPeFa~~pd~~i~~~~~~A~~~~l~n~~~s~~~~~~~r~~ll~LltAHll~L~~~~~~--g~ 78 (158) T protein:vir:10 1 MSTPPYRITFDPAGFIAEYPEFATVPTPRLQAMFNQAQAALLDNTGGSPVTDDNVLRELFNMLVAHLLTLFSAAPT--SA 78 (158) T ss_pred CCCCCceEEcChHHHHHhCcccccCCHHHHHHHHHhhhheeeCCcccccccChHHHHHHHHHHHHHHHHHhhhhhc--cc Confidence 653 33334489999999999999999999999999874 555443 466789999999999999754333 33 Q ss_pred cccccccceeeeeccceeEeeecc--cCCcchhhhhcCHHHHHHHHHHHHhcCCCccccCCcccccC Q lcl|NC_015456. 73 IESYSRRVTSFSLSGEFSQTFGEV--TKNQSENMMLSTPWGKIFEQLKARRRGRFALMTGLRGGCHQ 137 (137) Q Consensus 73 ~~~~~g~v~S~s~~G~vSvSy~~~--~~~~~~~wl~~T~YGq~y~~L~r~~g~Gg~~~~g~~~~c~~ 137 (137) .++.+|+|+|+| +|+||||||.+ +.++|++||++||||||||+|++++++|+.+++|++++-.- T Consensus 79 ~~g~vG~vsSas-~G~VSVS~d~~~~t~~~~~~W~~~T~YG~~fw~L~~~~~~Gg~v~Gg~pe~~~~ 144 (158) T protein:vir:10 79 NSRPPGRLSSAT-EGTVSSSFEYALPQGSAIAPWYNQTQYGAMFWMATAHYRSARYMVSGGSGIGTA 144 (158) T ss_pred ccCcccceeeee-eCceeEEeeeccccCCchhhhhhcCHHHHHHHHHHHhhCccccccccCCcccce Confidence 445689999999 69999999864 45778999999999999999999999999999999666543 No 12 >protein:vir:3639 Length: 158 # NCBI annotation: gp08 # Family: family:all:664 # MgeID: mge:75 # MgeName: Bcep781 # Cross-refs: genbank:acc:NP_705634;genbank:gi:23752319;genbank:GeneID:955737 Probab=100.00 E-value=2.3e-41 Score=243.34 Aligned_cols=134 Identities=17% Similarity=0.130 Sum_probs=110.0 Q ss_pred CCc--cccchHHHHHHHHhhhccCCCHHHHHHHHHHHHHH-hCCCCC-----chHHHHHHHHHHHHHHHHhccccccccc Q lcl|NC_015456. 1 MNQ--ENLIAVIEQMRKLVPALRKVPDETLYAWVEMAELF-VCQKTF-----KDAYVKALALYALHLAFLDGALKGEDED 72 (137) Q Consensus 1 m~~--~~~~~~i~~Fr~~~PeF~~vpD~~i~~~l~~A~~~-v~~~~~-----g~~~~~a~~ll~AH~l~l~~~~~~~~~~ 72 (137) ||- ....=-+++||++||||+|+||++|+.||++|+.+ +++.++ ++.++++++|||||+|+|+..... ++ T Consensus 1 ~~~~~~~v~Fd~a~FR~~fPeFa~~pd~~i~~~~~~A~~~~l~n~~~s~~~~~~~r~~ll~LltAHll~L~~~~~~--g~ 78 (158) T protein:vir:36 1 MSTPPYRITFDPAGFIAEYPEFATVPTPRLQAMFNQAQAALLDNTGGSPVTDDNVLRELFNMLVAHLLTLFSAAPT--SA 78 (158) T ss_pred CCCCCceEEcChHHHHHhCcccccCCHHHHHHHHHhhhheeeCCcccccccChHHHHHHHHHHHHHHHHHhhhhhc--cc Confidence 653 33334489999999999999999999999999874 555443 466789999999999999754333 33 Q ss_pred cccccccceeeeeccceeEeeecc--cCCcchhhhhcCHHHHHHHHHHHHhcCCCccccCCcccccC Q lcl|NC_015456. 73 IESYSRRVTSFSLSGEFSQTFGEV--TKNQSENMMLSTPWGKIFEQLKARRRGRFALMTGLRGGCHQ 137 (137) Q Consensus 73 ~~~~~g~v~S~s~~G~vSvSy~~~--~~~~~~~wl~~T~YGq~y~~L~r~~g~Gg~~~~g~~~~c~~ 137 (137) .++.+|+|+|+| +|+||||||.+ +.++|++||++||||||||+|++++++|+.+++|++++-.- T Consensus 79 ~~g~vG~vsSas-~G~VSVS~d~~~~t~~~~~~W~~~T~YG~~fw~L~~~~~~Gg~v~Gg~pe~~~~ 144 (158) T protein:vir:36 79 NSRPPGRLSSAT-EGTVSSSFEYALPQGSAIAPWYNQTQYGAMFWMATAHYRSARYMVSGGSGIGTA 144 (158) T ss_pred ccCcccceeeee-eCceeEEeeeccccCCchhhhhhcCHHHHHHHHHHHhhCccccccccCCcccce Confidence 445689999999 69999999864 45778999999999999999999999999999999666543 No 13 >protein:vir:104344 Length: 132 # NCBI annotation: hypothetical protein # Family: family:all:5122 # MgeID: mge:1593 # MgeName: RTP # Cross-refs: genbank:acc:YP_398973;genbank:gi:81343957;genbank:GeneID:3778876 Probab=100.00 E-value=1.7e-41 Score=244.07 Aligned_cols=131 Identities=43% Similarity=0.819 Sum_probs=125.2 Q ss_pred CCccccchHHHHHHHHhhhccCCCHHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHhccccccccccccccccc Q lcl|NC_015456. 1 MNQENLIAVIEQMRKLVPALRKVPDETLYAWVEMAELFVCQKTFKDAYVKALALYALHLAFLDGALKGEDEDIESYSRRV 80 (137) Q Consensus 1 m~~~~~~~~i~~Fr~~~PeF~~vpD~~i~~~l~~A~~~v~~~~~g~~~~~a~~ll~AH~l~l~~~~~~~~~~~~~~~g~v 80 (137) ||.+ +||.||.+||+|++|||++|+.|+|.|+++||.+.|||.+++|+.|||||+++++++.++++.++...+.|| T Consensus 1 ~~~~----~~e~~R~l~P~f~kvpdevI~~wielA~lfVc~~~~g~~~~~AlaL~taHLm~~dga~k~en~~~~t~S~rv 76 (132) T protein:vir:10 1 MNDA----ILAFMRSLVPALKAVDDESINVWIDLARLYVCADKFGNDADRAVGLYALHLMLSDGAFKGENEGLETYSRRM 76 (132) T ss_pred CchH----HHHHHHHhcchhhcCChHHHHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHhhccccccccccchhhhhhhh Confidence 8875 999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred eeeeeccceeEeeecccCCcchhhhhcCHHHHHHHHHHHHhcCCCccccCCcccccC Q lcl|NC_015456. 81 TSFSLSGEFSQTFGEVTKNQSENMMLSTPWGKIFEQLKARRRGRFALMTGLRGGCHQ 137 (137) Q Consensus 81 ~S~s~~G~vSvSy~~~~~~~~~~wl~~T~YGq~y~~L~r~~g~Gg~~~~g~~~~c~~ 137 (137) +|.|++|++||||+++++ ++.|+.+|||||.|++|+|+.++|+.++|++++|||. T Consensus 77 aS~Sl~Ge~Sisf~~~sa--~~s~L~~tp~Gkl~~~L~k~~~GgfgL~t~~~~~~cg 131 (132) T protein:vir:10 77 ASYSLSGEFSITYDNQSA--IQGDLSSSSWGRMYKALLRKKGGGFGLITSAAGGGCG 131 (132) T ss_pred hhhcccCceeeecccccc--cccccccCcHHHHHHHHHHhccCccccccccCcCCCC Confidence 999999999999997764 4559999999999999999999999999999999999 No 14 >protein:vir:80036 Length: 111 # NCBI annotation: gp10 # Family: family:all:3186 # MgeID: mge:1876 # MgeName: B054 # Cross-refs: genbank:acc:YP_001468714;genbank:gi:157325294;genbank:GeneID:5601727 Probab=99.63 E-value=3.7e-19 Score=121.63 Aligned_cols=110 Identities=23% Similarity=0.311 Sum_probs=91.4 Q ss_pred cchHHHHHHHHhhhccCCCHHHHHHHHHHHHHHhCCCCCc-hHHHHHHHHHHHHHHHHhccccccccccccccccceeee Q lcl|NC_015456. 6 LIAVIEQMRKLVPALRKVPDETLYAWVEMAELFVCQKTFK-DAYVKALALYALHLAFLDGALKGEDEDIESYSRRVTSFS 84 (137) Q Consensus 6 ~~~~i~~Fr~~~PeF~~vpD~~i~~~l~~A~~~v~~~~~g-~~~~~a~~ll~AH~l~l~~~~~~~~~~~~~~~g~v~S~s 84 (137) +.++|+..|...|+++.+||+.|+.+|++|..++.+..|. ++.|++.++|+||++++++ -+|+|.+ T Consensus 1 m~ttv~~vkl~a~~L~~~sDDsl~~~I~dA~~e~~a~gFp~~~~e~a~rYLa~HLat~~~-------------~~v~sE~ 67 (111) T protein:vir:80 1 MKTDVSKLKLTASSLASVSDDSLQVHIDDSYLEVQEKGFPEKFEERANRYLAAHLATLAN-------------KNVKSEA 67 (111) T ss_pred CchhHHHHHHhhHhhcCCChHHHHHHHHHHHHHhhcCCCChhHHHHHHHHHHHHHHHhcC-------------CCCchhh Confidence 6678999999999999999999999999999999999998 5579999999999999963 2456777 Q ss_pred eccceeEeeecccCCcchhhhhcCHHHHHHHHHHHHhcCCCccccCCc Q lcl|NC_015456. 85 LSGEFSQTFGEVTKNQSENMMLSTPWGKIFEQLKARRRGRFALMTGLR 132 (137) Q Consensus 85 ~~G~vSvSy~~~~~~~~~~wl~~T~YGq~y~~L~r~~g~Gg~~~~g~~ 132 (137) + |..--.|..... ..||..|+|||+||+|.+.++.|+.+-...+ T Consensus 68 V-~~Lk~~Y~~~~~---~~~l~~s~wGq~Y~rL~k~~~~gs~~~~vVv 111 (111) T protein:vir:80 68 V-GSLKREYYEVKG---DSGLLSTEYGQEYARLLKEANGGSGISMVVV 111 (111) T ss_pred h-hhHHHHhhhccc---ccccccchhHHHHHHHHHHhcCCccceeeeC Confidence 4 666666653222 2589999999999999999998876655555 No 15 >protein:vir:102961 Length: 131 # NCBI annotation: hypothetical protein # Family: family:all:26777 # MgeID: mge:1461 # MgeName: EJ-1 # Cross-refs: genbank:acc:NP_945287;genbank:gi:39653722;uniprot:Q708M5;genbank:GeneID:2672875 Probab=95.91 E-value=0.00011 Score=42.37 Aligned_cols=107 Identities=10% Similarity=-0.037 Sum_probs=63.9 Q ss_pred HHHHHHHHhhh---------ccC--CCHH-HHHHHHHHHHHHhC----CCCCchHH-----HHHHHHHHHHHHHHhcccc Q lcl|NC_015456. 9 VIEQMRKLVPA---------LRK--VPDE-TLYAWVEMAELFVC----QKTFKDAY-----VKALALYALHLAFLDGALK 67 (137) Q Consensus 9 ~i~~Fr~~~Pe---------F~~--vpD~-~i~~~l~~A~~~v~----~~~~g~~~-----~~a~~ll~AH~l~l~~~~~ 67 (137) +|+..+..--. +.| .-|+ .|++.++.+...+- -+.+.+-+ ++++-+|..|.+.. T Consensus 1 ~~~~lkq~~~~~~~~~~l~~~~d~~~kD~~vl~faie~v~~~IlnycNikeiP~~Le~v~~~maiDll~~e~~~~----- 75 (131) T protein:vir:10 1 MIQELKQDNTMYLISCVRKMRQDNYFKDMEVLHYALTQAENEILNYIHQDSVPGRLENVWIDMTNDLLDKVKEQS----- 75 (131) T ss_pred ChhhhhhhhhhhhhhhhhccccccccchHHHHHHHHHHHHHHHhhhcCCcccchhhHHHHHHHHHHHHhhhcccc----- Confidence 56666662211 111 2344 68999999998662 33344433 34555555554321 Q ss_pred ccccccccccccceeeeeccceeEeeecccCCcc---hhhhhcCHHHHHHHHHHHHh Q lcl|NC_015456. 68 GEDEDIESYSRRVTSFSLSGEFSQTFGEVTKNQS---ENMMLSTPWGKIFEQLKARR 121 (137) Q Consensus 68 ~~~~~~~~~~g~v~S~s~~G~vSvSy~~~~~~~~---~~wl~~T~YGq~y~~L~r~~ 121 (137) ......+.+.|-|+|.+ +|+-||||..++.... +--=-.+.|+++|-+.||++ T Consensus 76 ~k~~~i~~~~g~VsSI~-eGDTsIsf~s~t~~~qrl~~~~s~l~~Y~~qL~~yRRL~ 131 (131) T protein:vir:10 76 VLAEKAGADDFSVKSIK-MGDTTIEKVSPYEMIQRMKQVPSSLERYKRQLNRFRKLL 131 (131) T ss_pred cccccccccccceeeee-ecceeeeccCCccHHHHHHHHHHHHhhhHHHHhhhcccC Confidence 11223344667789999 7999999976654321 11113478999999999999 No 16 >protein:vir:43 Length: 131 # NCBI annotation: gp8 # Family: family:all:3882 # MgeID: mge:2 # MgeName: A118 # Cross-refs: genbank:acc:NP_463469;swissprot:trembl:q9t1b5;genbank:gi:16798791;uniprot:Q9T1B5;genbank:GeneID:922374 Probab=91.52 E-value=0.0084 Score=31.95 Aligned_cols=115 Identities=15% Similarity=0.040 Sum_probs=63.4 Q ss_pred CCccccchHHHHHHHHhhhccCCCHHHHHHHHHHHHHHhCCCCCc---------------hHHHHHHHHHHHHHHHHhcc Q lcl|NC_015456. 1 MNQENLIAVIEQMRKLVPALRKVPDETLYAWVEMAELFVCQKTFK---------------DAYVKALALYALHLAFLDGA 65 (137) Q Consensus 1 m~~~~~~~~i~~Fr~~~PeF~~vpD~~i~~~l~~A~~~v~~~~~g---------------~~~~~a~~ll~AH~l~l~~~ 65 (137) |+=- +.+.|+..| ....+|++.+..++..|...||.--++ +.-++|++..+-++... +. T Consensus 1 M~Y~----d~~~Y~~~y-~g~~i~e~~F~~l~~rAs~~ID~~T~~ri~~~~~~~~~~~~~~~vk~A~c~q~e~~~~~-g~ 74 (131) T protein:vir:43 1 MPYT----TLEFYNDEY-AGEHLEQDEFDKLLKHAERKIDSVTFYRIRKGGIESFSEFIQHQIQLATCNQIEYFKEA-GG 74 (131) T ss_pred CCCC----CHHHHHHhh-CCCCCCHhHHHHHHHHHHHHHHHHhcccccccCccccchhhHHHHHHHHHHHHHHHHHh-HH Confidence 5433 677777777 455689999999999999999754332 12235666666555543 21 Q ss_pred ccccccccccccccceeeeeccceeEeeecccCCcchhhhhcCHHHHHHHHHHHHhcCCCccccCCcccccC Q lcl|NC_015456. 66 LKGEDEDIESYSRRVTSFSLSGEFSQTFGEVTKNQSENMMLSTPWGKIFEQLKARRRGRFALMTGLRGGCHQ 137 (137) Q Consensus 66 ~~~~~~~~~~~~g~v~S~s~~G~vSvSy~~~~~~~~~~wl~~T~YGq~y~~L~r~~g~Gg~~~~g~~~~c~~ 137 (137) . .....+.++|.++ |..||||...+....+ -.....=+.-..+++.. |-.|- ||+- T Consensus 75 ~------s~~~~~~~~S~sv-G~~Svs~~~~~~~~~~--~~~~~~~~~a~~~L~~T--GLlyr-----GV~~ 130 (131) T protein:vir:43 75 T------SELAVSKPDNVSI-GRTSISDSNFASTATS--LNSGLIGSDVRSYLAHT--GLLYN-----GVGV 130 (131) T ss_pred H------hhhhccccCeeec-CceEEeecccccchhh--hchhhhHHHHHHHHhcc--CCeec-----CCCC Confidence 1 1123445789995 9999999764432111 01111222233333322 22332 4433 No 17 >protein:vir:98900 Length: 132 # NCBI annotation: hypothetical protein # Family: family:all:3882 # MgeID: mge:1568 # MgeName: BCJA1c # Cross-refs: genbank:acc:YP_164420;genbank:gi:56694910;genbank:GeneID:3197290 Probab=90.73 E-value=0.015 Score=30.64 Aligned_cols=116 Identities=15% Similarity=0.053 Sum_probs=62.4 Q ss_pred CCccccchHHHHHHHHhhhccCCCHHHHHHHHHHHHHHhCCCCCc---------------hHHHHHHHHHHHHHHHHhcc Q lcl|NC_015456. 1 MNQENLIAVIEQMRKLVPALRKVPDETLYAWVEMAELFVCQKTFK---------------DAYVKALALYALHLAFLDGA 65 (137) Q Consensus 1 m~~~~~~~~i~~Fr~~~PeF~~vpD~~i~~~l~~A~~~v~~~~~g---------------~~~~~a~~ll~AH~l~l~~~ 65 (137) |+=- +.+.|++. -...+|++.++.++..|...||.--++ +.-.+|+++.+-++-.. |. T Consensus 1 M~Y~----t~~~Y~~~--~G~~i~e~~F~~l~~rAs~~ID~iT~~ri~~~~~~~d~~~~~~~vk~A~c~qiey~~~~-G~ 73 (132) T protein:vir:98 1 MPYL----TYEEFMDL--NGRDIDDKKFEKLLPKASAIIDGVTGHFYQKVDMEKDNAWRVNQFKLALCAQIEYFDAL-GA 73 (132) T ss_pred CCCC----CHHHHHhh--cCCCCCHHHHHHHHHHHHHHHHHHhcccccCCCccccChHHHHHHHHHHHHHHHHHHhc-cc Confidence 5543 56666542 223589999999999999999743332 12345666555544332 22 Q ss_pred ccccccccccccccceeeeeccceeEeeecccCCcchhhhhcCHHHHHHHHHHHHhcCCCccccCCcccccC Q lcl|NC_015456. 66 LKGEDEDIESYSRRVTSFSLSGEFSQTFGEVTKNQSENMMLSTPWGKIFEQLKARRRGRFALMTGLRGGCHQ 137 (137) Q Consensus 66 ~~~~~~~~~~~~g~v~S~s~~G~vSvSy~~~~~~~~~~wl~~T~YGq~y~~L~r~~g~Gg~~~~g~~~~c~~ 137 (137) .. .....+.|+|.|+ |..||||....++... -...-..-+.-..+++..|. .| +|+++ T Consensus 74 ~s-----ae~~~~~~~S~sv-G~~Svs~~s~~~~~~~-~~~~~~~~~~a~~~L~~tGL--Ly-----rGV~~ 131 (132) T protein:vir:98 74 TT-----FEEINNSPQTFQA-GRTSVSNASRYNPSGA-NESKPLVAEDVYIYLQGTGL--LF-----QGVKT 131 (132) T ss_pred hh-----hhhccCccceeee-CcEEEEeeccCCcccc-cccccchHHHHHHHHhhcCC--cc-----ccCCC Confidence 11 1112345889995 9999999743321110 00111112444455554432 33 47777 No 18 >protein:vir:105776 Length: 133 # NCBI annotation: gp11 # Family: family:all:10997 # MgeID: mge:1501 # MgeName: ES18 # Cross-refs: genbank:acc:YP_224149;genbank:gi:62362224;genbank:GeneID:3342529 Probab=89.85 E-value=0.01 Score=31.47 Aligned_cols=111 Identities=24% Similarity=0.372 Sum_probs=65.3 Q ss_pred cchHHHHHHHHhhhcc-CCCHHHHHHHHHHHHHH---hCCCCCchHHHHHHHHHHHHHHHHhccccccccccccccccce Q lcl|NC_015456. 6 LIAVIEQMRKLVPALR-KVPDETLYAWVEMAELF---VCQKTFKDAYVKALALYALHLAFLDGALKGEDEDIESYSRRVT 81 (137) Q Consensus 6 ~~~~i~~Fr~~~PeF~-~vpD~~i~~~l~~A~~~---v~~~~~g~~~~~a~~ll~AH~l~l~~~~~~~~~~~~~~~g~v~ 81 (137) +|+ .++.|+..-+.. ++||..|+.++++++.+ ++ ..|.+..+.++.+|++-+|.+.. ...+|+ T Consensus 1 mIT-~~qa~~~L~slG~svP~~iL~~~v~q~nsi~~cLd-agY~e~tq~LI~lya~~LlA~~~-----------g~R~Is 67 (133) T protein:vir:10 1 MIT-TEQAKEYLESVGITLPDFILQAIVEQANSIQECLD-AHYPPATALLIQSYLLGLMALGQ-----------GDRYIS 67 (133) T ss_pred CCC-HHHHHHHHHhcCCcchHHHHHHHHHHHhhHHHHHh-CCCCHHHHHHHHHHHHHHHhhcc-----------CCceee Confidence 443 667777666665 59999999999999744 45 48889999999999999997742 235666 Q ss_pred eeeeccceeEeeecccCCcchhhhhcCHHHHHHHHHHH--HhcCCCccc---------cCC---cccccC Q lcl|NC_015456. 82 SFSLSGEFSQTFGEVTKNQSENMMLSTPWGKIFEQLKA--RRRGRFALM---------TGL---RGGCHQ 137 (137) Q Consensus 82 S~s~~G~vSvSy~~~~~~~~~~wl~~T~YGq~y~~L~r--~~g~Gg~~~---------~g~---~~~c~~ 137 (137) |.+-----|.||+-.. ..++|=+.|-+|+. +.|--+-++ .|. +|||-- T Consensus 68 SQ~APSGASrSF~Y~~--------~~~~~~~l~~~L~~lD~~gCt~~Lip~d~~~~a~vG~f~vvggc~c 129 (133) T protein:vir:10 68 SQTAPNGASRSFRYQS--------FADRWKGALSLLRGADKFRCANGLIPPDPTNTAFAGIWIGKGGCMC 129 (133) T ss_pred cccCCccccccccccC--------CCccHHHHHHHHHhhhhccccccccCCCccccccceeeeecccccc Confidence 6663212244443111 12233333333332 222222332 122 677765 No 19 >protein:vir:80389 Length: 172 # NCBI annotation: BcepGomrgp09 # Family: family:all:703 # MgeID: mge:1882 # MgeName: BcepGomr # Cross-refs: genbank:acc:YP_001210229;genbank:gi:146329921;genbank:GeneID:5123498 Probab=88.51 E-value=0.032 Score=28.79 Aligned_cols=125 Identities=10% Similarity=0.009 Sum_probs=67.0 Q ss_pred CC----------ccccchHHHHHHHHhhhccC-CCHHHHHHHHHHHHHHhCCC--CC-c--------------------- Q lcl|NC_015456. 1 MN----------QENLIAVIEQMRKLVPALRK-VPDETLYAWVEMAELFVCQK--TF-K--------------------- 45 (137) Q Consensus 1 m~----------~~~~~~~i~~Fr~~~PeF~~-vpD~~i~~~l~~A~~~v~~~--~~-g--------------------- 45 (137) |. ..|.--+++++++.+.+... +|++..+..|-.|..+||.- +| | T Consensus 1 Malived~~g~~~anSYvt~~~a~aY~~~rg~~~~~d~~e~aL~~A~dyid~~~~~f~G~r~~~~Q~l~wPR~g~~~~g~ 80 (172) T protein:vir:80 1 MALIVEDGTGKPDANTYAGADFVIAYAQARGVTVDADEAERLILEAMDYIESFRRRWKGERNTREQGLTWPRHDAVVDGF 80 (172) T ss_pred CeeEeeCCCCCccccccccHHHHHHHHHHcCCCcCHHHHHHHHHHHHHHHhhccCccccccCCccccccccccCcccCcc Confidence 43 24455568888887776543 89999999999999999852 23 2 Q ss_pred --------hHHHHHHHHHHHHHHHHhccccccccccccccccceeeeeccceeEeeecccCCcchhh--hhcCHHH--HH Q lcl|NC_015456. 46 --------DAYVKALALYALHLAFLDGALKGEDEDIESYSRRVTSFSLSGEFSQTFGEVTKNQSENM--MLSTPWG--KI 113 (137) Q Consensus 46 --------~~~~~a~~ll~AH~l~l~~~~~~~~~~~~~~~g~v~S~s~~G~vSvSy~~~~~~~~~~w--l~~T~YG--q~ 113 (137) +..++|.+.++.-+ +++. ..........|++.++ |+++++|+.......... -..+.|- .. T Consensus 81 ~~~~~~IP~~v~~A~~elA~~~--~~g~----~~~~~~~~~~v~~ekV-G~i~~eY~~~~~~~~~~~~~~~~~~~~~v~~ 153 (172) T protein:vir:80 81 VIPSDVIPKELQSAVAAAVIEQ--VNGF----ELQQSQDQWAVRIEKV-DVIEVQYAAGGGGQSASANAPMKPTFPKIDA 153 (172) T ss_pred cccccchhHHHHHHHHHHHHHH--hcCC----ccCcCCCCceeeEEec-cceEEeeecccCccccccccCCccchHHHHH Confidence 12234555555422 2221 1111222346889996 999999986543221111 0123333 22 Q ss_pred HHHHHHHhcCCCccccCCccc Q lcl|NC_015456. 114 FEQLKARRRGRFALMTGLRGG 134 (137) Q Consensus 114 y~~L~r~~g~Gg~~~~g~~~~ 134 (137) +++=+ ..|.||+-+- .++| T Consensus 154 LL~p~-l~~~gg~~~~-~vrg 172 (172) T protein:vir:80 154 LLNPL-LVGDGGLFLV-AVRG 172 (172) T ss_pred HHhhh-hcCCCCeeee-eecC Confidence 32222 2333443333 4555 No 20 >protein:vir:80967 Length: 131 # NCBI annotation: gp8 # Family: family:all:3882 # MgeID: mge:1886 # MgeName: A500 # Cross-refs: genbank:acc:YP_001468394;genbank:gi:157324968;genbank:GeneID:5601402 Probab=87.77 E-value=0.03 Score=28.93 Aligned_cols=115 Identities=13% Similarity=0.003 Sum_probs=62.1 Q ss_pred CCccccchHHHHHHHHhhhccCCCHHHHHHHHHHHHHHhCCCCCc---------------hHHHHHHHHHHHHHHHHhcc Q lcl|NC_015456. 1 MNQENLIAVIEQMRKLVPALRKVPDETLYAWVEMAELFVCQKTFK---------------DAYVKALALYALHLAFLDGA 65 (137) Q Consensus 1 m~~~~~~~~i~~Fr~~~PeF~~vpD~~i~~~l~~A~~~v~~~~~g---------------~~~~~a~~ll~AH~l~l~~~ 65 (137) |+=- +.+.|+..|. -..+|++.+..++..|...||.--++ +.-++|++..+-++.... . T Consensus 1 M~Y~----d~~~Y~~~y~-G~~i~e~~F~~l~~rAs~~ID~~T~~ri~~~~~d~~~~~~~~~vk~A~c~q~e~~~~~g-~ 74 (131) T protein:vir:80 1 MPYT----TLEFYTNEYA-GEHLEQDEFAKLLKHAERKIDSVTFYRIRKSGIEAFSEFIQHQIQLATCNQIEYFKEAG-G 74 (131) T ss_pred CCCC----CHHHHHHhhC-CCCCchhHHHHHHHHHHHHHHHHhcccccccccccCchhHHHHHHHHHHHHHHHHHHhh-h Confidence 6543 6677777762 22488999999999999999743332 112355666655554432 1 Q ss_pred ccccccccccccccceeeeeccceeEeeecccCCcchhhhhcCHHHHHHHHHHHHhcCCCccccCCcccccC Q lcl|NC_015456. 66 LKGEDEDIESYSRRVTSFSLSGEFSQTFGEVTKNQSENMMLSTPWGKIFEQLKARRRGRFALMTGLRGGCHQ 137 (137) Q Consensus 66 ~~~~~~~~~~~~g~v~S~s~~G~vSvSy~~~~~~~~~~wl~~T~YGq~y~~L~r~~g~Gg~~~~g~~~~c~~ 137 (137) .. ....+.++|.++ |..||||...+...... ....--+.-..+++.. |-.|- ||+- T Consensus 75 ~~------~~~~~~~~S~sv-G~~Svs~~~~~~~~~~~--~~~~~~~~a~~~L~~T--GLlyr-----GV~~ 130 (131) T protein:vir:80 75 TS------ELAVSKPDNVSI-GRTSISDSNFASTATSL--NSGLVGSDVRSYLAHT--GLLYN-----GVGV 130 (131) T ss_pred hh------hhcccccCeeee-CceEEeeccccchhhhh--hhhhhHHHHHHHHhcc--CCeec-----CCCC Confidence 11 123456789995 99999997644322110 1111222333344333 22332 4433 No 21 >protein:vir:106583 Length: 105 # NCBI annotation: putative protein # Family: family:all:6481 # MgeID: mge:1598 # MgeName: Lj965 # Cross-refs: genbank:acc:NP_958586;genbank:gi:41179246;genbank:GeneID:2717119 Probab=86.36 E-value=0.033 Score=28.73 Aligned_cols=100 Identities=14% Similarity=0.020 Sum_probs=58.5 Q ss_pred CCccccchHHHHHHHHhhhccCCCHHHHHHHHHHHHHHh----CCCCCchHHHHHHHHHHHHHHHHhccccccccccccc Q lcl|NC_015456. 1 MNQENLIAVIEQMRKLVPALRKVPDETLYAWVEMAELFV----CQKTFKDAYVKALALYALHLAFLDGALKGEDEDIESY 76 (137) Q Consensus 1 m~~~~~~~~i~~Fr~~~PeF~~vpD~~i~~~l~~A~~~v----~~~~~g~~~~~a~~ll~AH~l~l~~~~~~~~~~~~~~ 76 (137) |+++.+++.|..+..+- ....|+.|+.+|++|...+ +.+...+..+..+.=++.+.. ++.+.+ T Consensus 2 ~~~~~~~e~ik~L~~~~---d~~~DelL~~lieda~~~vl~y~nr~~ip~~l~~~v~evav~~f---NR~G~E------- 68 (105) T protein:vir:10 2 LNVDQLTEIVSALSTRL---ENVNNALLTELVKESIAQVLDYTGQKKLVGSMDIYVKKLAVINY---NRLGIE------- 68 (105) T ss_pred CchHHHHHHHHHHhccC---CCchhHHHHHHHHHHHHHHHHHcCCcccchhHHHHHHHHHHHHh---cccCCc------- Confidence 99999999888877644 2456889999999999776 455555555555555555533 122211 Q ss_pred cccceeeeeccceeEeeecccCCcchhhhhcCHHHHHHHHHHHHhcCCCc Q lcl|NC_015456. 77 SRRVTSFSLSGEFSQTFGEVTKNQSENMMLSTPWGKIFEQLKARRRGRFA 126 (137) Q Consensus 77 ~g~v~S~s~~G~vSvSy~~~~~~~~~~wl~~T~YGq~y~~L~r~~g~Gg~ 126 (137) ..+|-| +|-||.||.+.--+. |= ..++-.|+...+-+ T Consensus 69 --G~tS~S-egGvS~sy~~~~~~~---------~~-~~l~~yR~~~v~~~ 105 (105) T protein:vir:10 69 --GETQRS-EGGITNYLETGIPKD---------IR-QGLNSYRIAKVKKL 105 (105) T ss_pred --ccceee-cCCeeeeeeccCcHH---------HH-HHHHHHhhhcccCC Confidence 236777 789999997532111 11 11222233333222 No 22 >protein:vir:79050 Length: 133 # NCBI annotation: hypothetical protein # Family: family:all:6416 # MgeID: mge:1861 # MgeName: phiC2 # Cross-refs: genbank:acc:YP_001110727;genbank:gi:134287344;genbank:GeneID:4955224 Probab=82.30 E-value=0.034 Score=28.65 Aligned_cols=113 Identities=14% Similarity=0.111 Sum_probs=62.8 Q ss_pred CCccccchHHHHHHHHhhhccC----CCHHHHHHHHHHHHHHhCC----CCCch-H----HHHHHHHHHHHHHHHhcccc Q lcl|NC_015456. 1 MNQENLIAVIEQMRKLVPALRK----VPDETLYAWVEMAELFVCQ----KTFKD-A----YVKALALYALHLAFLDGALK 67 (137) Q Consensus 1 m~~~~~~~~i~~Fr~~~PeF~~----vpD~~i~~~l~~A~~~v~~----~~~g~-~----~~~a~~ll~AH~l~l~~~~~ 67 (137) |-++ ++++++++.-+|.- -++..|++.++.+...+-+ +.++. + .++++..|-.|..+. +... T Consensus 1 ~~~~----i~e~i~~~Lk~~~~~~~~~d~~iL~fa~e~~~n~I~N~cNi~eiP~~L~~v~~~mai~~fl~~kk~~-~~~~ 75 (133) T protein:vir:79 1 MGNN----IIDDIEKRLESFGYILKDGDKWLIDFVREKIENIIKLDCNIKTMPIELKEIEADMIVGEFLFTKKNM-GQLD 75 (133) T ss_pred CCch----HHHHHHHHHHHhCCCCCccchHHHHHHHHHHHHHHhhhcChhhcchhHHHHHHHHHHHHHHhccccc-CCCC Confidence 8877 66667777767653 4677889899999876633 22332 2 233444333332221 0111 Q ss_pred ccccccccccccceeeeeccceeEeeeccc-CCcc----hhh--hhcCHHHHHHHHHHHHhc Q lcl|NC_015456. 68 GEDEDIESYSRRVTSFSLSGEFSQTFGEVT-KNQS----ENM--MLSTPWGKIFEQLKARRR 122 (137) Q Consensus 68 ~~~~~~~~~~g~v~S~s~~G~vSvSy~~~~-~~~~----~~w--l~~T~YGq~y~~L~r~~g 122 (137) -.+. ..-+.|.|.+ +|+-||+|...+ ++.. ..| +-.+-|..++-+.||+.= T Consensus 76 l~~~---D~~~~v~sIk-eGDTsv~f~~~~~s~t~eq~l~s~i~~L~~~~k~~l~~yRkLrW 133 (133) T protein:vir:79 76 IESI---NFEAVEKSIS-EGDTKVDFAIGSGSQTPEQRFDSLIAYLTAYGKNKILTFRCLRW 133 (133) T ss_pred cccc---cchhhhhhee-cccceeecccCCCccchhHHHHHHHHHHhhcccchhhccccccC Confidence 1111 1223467778 799999997543 2221 233 224566777877777765 No 23 >protein:vir:5976 Length: 102 # NCBI annotation: hypothetical protein # Family: family:all:789 # ACLAME annotation(s): phi:0000067 - phage portal associated protein # MgeID: mge:125 # MgeName: SPP1 # Cross-refs: genbank:acc:NP_690676;genbank:geneid:6329129;genbank:gi:22855070;uniprot:Q38584;genbank:GeneID:955305 Probab=80.03 E-value=0.024 Score=29.43 Aligned_cols=93 Identities=16% Similarity=0.241 Sum_probs=55.8 Q ss_pred CCccccchHHHHHHHHhhhccCCC----HHHHHHHHHHHHHHhCCCCCch-----HHHHHHHHHHHHHHHHhcccccccc Q lcl|NC_015456. 1 MNQENLIAVIEQMRKLVPALRKVP----DETLYAWVEMAELFVCQKTFKD-----AYVKALALYALHLAFLDGALKGEDE 71 (137) Q Consensus 1 m~~~~~~~~i~~Fr~~~PeF~~vp----D~~i~~~l~~A~~~v~~~~~g~-----~~~~a~~ll~AH~l~l~~~~~~~~~ 71 (137) |..+ +.+.+.|==.+-. ...|..+++.|+.+ |+..|.+ -+.-++.+++|..+.-++ T Consensus 1 Md~~-------~VK~ll~i~~~s~d~~i~~lip~y~e~aedy-CN~~F~dkdg~~~lP~gVkkfvAe~ik~y~------- 65 (102) T protein:vir:59 1 MDIQ-------RVKRLLSITNDKHDEYLTEMVPLLVEFAKDE-CHNPFIDKDGNESIPSGVLIFVAKAAQFYM------- 65 (102) T ss_pred CChH-------HhhhhhcCCCCccHHHHHHHHHHHHHHHHHH-hCCccccccccccCCccHHHHHHHHHHhcC------- Confidence 5433 3344432111222 34677888999888 5557774 478899999999886543 Q ss_pred ccccccccceeeeeccceeEeeecccCCcchhhhhcCHHHHHHHHHHH Q lcl|NC_015456. 72 DIESYSRRVTSFSLSGEFSQTFGEVTKNQSENMMLSTPWGKIFEQLKA 119 (137) Q Consensus 72 ~~~~~~g~v~S~s~~G~vSvSy~~~~~~~~~~wl~~T~YGq~y~~L~r 119 (137) ..+.++|.|. |.||.+|.+.--...-+||+ | |.+|.| T Consensus 66 ----~~~nissRsM-gtVSYty~T~iP~~i~~~L~--P----yRrl~~ 102 (102) T protein:vir:59 66 ----TNAGLTGRSM-DTVSYNFATEIPSTILKKLN--P----YRKMAR 102 (102) T ss_pred ----CCCCcccccc-cceeeechhhhhHHHHHHhh--H----HHhhcC Confidence 2367788896 99999997532222233443 2 333333 No 24 >protein:vir:99922 Length: 165 # NCBI annotation: gp9 # Family: family:all:7267 # MgeID: mge:1611 # MgeName: Halo # Cross-refs: genbank:acc:YP_655526;genbank:gi:109392296;genbank:GeneID:4157091 Probab=76.62 E-value=0.036 Score=28.53 Aligned_cols=119 Identities=13% Similarity=0.057 Sum_probs=67.4 Q ss_pred CCccccchHHHHHHH-HhhhccCCCHHHHHHHHHHHHHHh-------CCCCCchHHHHHHHHHHHHHHHHhccccccccc Q lcl|NC_015456. 1 MNQENLIAVIEQMRK-LVPALRKVPDETLYAWVEMAELFV-------CQKTFKDAYVKALALYALHLAFLDGALKGEDED 72 (137) Q Consensus 1 m~~~~~~~~i~~Fr~-~~PeF~~vpD~~i~~~l~~A~~~v-------~~~~~g~~~~~a~~ll~AH~l~l~~~~~~~~~~ 72 (137) |.+--..++....+. ..-.|+++|.+....+|+++...- ++..| +..+.|-..+.--+|..+- . T Consensus 1 ~~~~~~~~p~~ii~~eDl~Pf~~i~~~ka~~mI~da~A~A~~vAPCi~~~~f-~~~~aAKaIlrgAiLRW~e-------~ 72 (165) T protein:vir:99 1 MTEPTPTEPEPLLTAEDLAPFATIPKAKADEMIEDALGMAEVHAPCINDPGF-AHRRAAKAILRGAILRWNE-------A 72 (165) T ss_pred CCCCCCCCcceeeehhhccccccCCHHHHHHHHhhhhhhhhhhccccCCCCc-ccHHHHHHHHHHhhhhhhc-------c Confidence 777655554443333 344578999999999988876554 22222 2234444455555554431 1 Q ss_pred cccccccceeeeeccceeEeeecccCCcchhhhhcCHHHHHHHHHHHHhc-CC-----CccccCCcccc----------- Q lcl|NC_015456. 73 IESYSRRVTSFSLSGEFSQTFGEVTKNQSENMMLSTPWGKIFEQLKARRR-GR-----FALMTGLRGGC----------- 135 (137) Q Consensus 73 ~~~~~g~v~S~s~~G~vSvSy~~~~~~~~~~wl~~T~YGq~y~~L~r~~g-~G-----g~~~~g~~~~c----------- 135 (137) -+|-|++.| .|...+++|+-+-....-| =.+--+|.|++. -| +.+-+-..+.| T Consensus 73 ---GSGAit~~T-aGPf~qT~DtRs~r~~mfw------PSEItqLqklC~~~g~~~~AFsIDt~p~g~v~Hs~~Cs~~fG 142 (165) T protein:vir:99 73 ---GAGAATTKT-AGIYGQTVDTRQPRKAMFF------PSEIDQLRKLCRPDDDNGGAFSIDLLPQETVTHAEICSIYFG 142 (165) T ss_pred ---cCceeeecc-cccceeeeccccccccccC------hhhHHHHHHHhcCCCCCCcceeeecccCCCcccccccceeec Confidence 156678888 6999999986554322222 235569999994 22 22222334444 Q ss_pred ---cC Q lcl|NC_015456. 136 ---HQ 137 (137) Q Consensus 136 ---~~ 137 (137) +- T Consensus 143 g~CSC 147 (165) T protein:vir:99 143 GGCSC 147 (165) T ss_pred Ccccc Confidence 32 No 25 >protein:vir:80668 Length: 153 # NCBI annotation: gp7 # Family: family:all:7267 # MgeID: mge:1884 # MgeName: PA6 # Cross-refs: genbank:acc:YP_001285583;genbank:gi:148727089;genbank:GeneID:5247039 Probab=72.02 E-value=0.12 Score=25.69 Aligned_cols=112 Identities=20% Similarity=0.119 Sum_probs=60.6 Q ss_pred CCccccchHHHHHHHHhhhccCCCHHHHHHHHHHHHHHh-------CCCCCchHHHHHHHHHHHHHHHHhcccccccccc Q lcl|NC_015456. 1 MNQENLIAVIEQMRKLVPALRKVPDETLYAWVEMAELFV-------CQKTFKDAYVKALALYALHLAFLDGALKGEDEDI 73 (137) Q Consensus 1 m~~~~~~~~i~~Fr~~~PeF~~vpD~~i~~~l~~A~~~v-------~~~~~g~~~~~a~~ll~AH~l~l~~~~~~~~~~~ 73 (137) |-+++.- +..+.|+++|.+.++..|+++...- ++..| +..+.|-..+.--+|..+- T Consensus 1 m~v~i~~-------~Dl~pF~dI~~~k~~ami~D~~a~A~~vAPCi~~~~f-~~~~aAKaIlrgAiLRW~e--------- 63 (153) T protein:vir:80 1 MGIILKP-------EDIEPFADIPREKLEAMIADVEAVAVSVAPCIAKPDF-KYKDAAKAILRRALLRWND--------- 63 (153) T ss_pred Cceeech-------hhccccccCCHHHHHHHHHhhhhhhhhhccccCCCCc-ccHHHHHHHHHHHhhhhhh--------- Confidence 7666433 3457788998888777777665443 22222 2234444455555554431 Q ss_pred ccccccceeeeeccceeEeeecccCCcchhhhhcCHHHHHHHHHHHHhc---CCC---ccccCCcccc------------ Q lcl|NC_015456. 74 ESYSRRVTSFSLSGEFSQTFGEVTKNQSENMMLSTPWGKIFEQLKARRR---GRF---ALMTGLRGGC------------ 135 (137) Q Consensus 74 ~~~~g~v~S~s~~G~vSvSy~~~~~~~~~~wl~~T~YGq~y~~L~r~~g---~Gg---~~~~g~~~~c------------ 135 (137) .+.+|-|++.| .|...+++++-+- -+-.| =.|--+|.|++. .++ .+.+-..++| T Consensus 64 ~G~SGait~~t-aGpf~qT~dtrs~-r~lfw------PSEItqLqklC~~~~~~g~Af~id~t~~~~v~Hs~~Cs~~fGg 135 (153) T protein:vir:80 64 TGVSGQVQYES-AGPFAQTTRSNTP-TNLLW------PSEIAALKKLCEGDGGAGKAFTITPTMRSSVNHSEVCSTVWGE 135 (153) T ss_pred cCcccceeeec-cccceeeeccCCc-eeccC------hhhHHHHHHHhcCCCCCcceeEeecCCCCccccccccceeecC Confidence 12356778888 6999888875442 11111 235558999983 111 2222223333 Q ss_pred --cC Q lcl|NC_015456. 136 --HQ 137 (137) Q Consensus 136 --~~ 137 (137) +- T Consensus 136 ~CSC 139 (153) T protein:vir:80 136 GCSC 139 (153) T ss_pred cccc Confidence 33 No 26 >protein:vir:96128 Length: 98 # NCBI annotation: ORF050 # Family: family:all:789 # ACLAME annotation(s): phi:0000067 - phage portal associated protein # MgeID: mge:1602 # MgeName: 37 # Cross-refs: genbank:acc:YP_240080;genbank:gi:66395776;genbank:GeneID:5133109 Probab=70.57 E-value=0.014 Score=30.79 Aligned_cols=92 Identities=17% Similarity=0.279 Sum_probs=55.6 Q ss_pred CCccccchHHHHHHHHh-hhccCC-----CHHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHhccccccccccc Q lcl|NC_015456. 1 MNQENLIAVIEQMRKLV-PALRKV-----PDETLYAWVEMAELFVCQKTFKDAYVKALALYALHLAFLDGALKGEDEDIE 74 (137) Q Consensus 1 m~~~~~~~~i~~Fr~~~-PeF~~v-----pD~~i~~~l~~A~~~v~~~~~g~~~~~a~~ll~AH~l~l~~~~~~~~~~~~ 74 (137) |..+ +.+.+- -...+. =...|..|++.|+.+ |+..|.+-+.-++..|+|-.+.-+ T Consensus 1 Md~~-------dVK~ln~~~i~~~~~d~~~~~li~~y~e~aedy-CN~~F~k~lP~gVkkfiAe~iky~----------- 61 (98) T protein:vir:96 1 MEPK-------EVKQLNLMPIEDTSNDDVLGDLIKFYKGIAEEY-CNKTFEAPYPFGVRKFIAECIKYG----------- 61 (98) T ss_pred CchH-------HhHHhhcccCCCcchHHHHHHHHHHHHHHHHHH-hCCcccccCCccHHHHHHHHHhhC----------- Confidence 5432 333330 112222 134677888999888 566888888899999999988631 Q ss_pred cccccceeeeeccceeEeeecccCCcchhhhhcCHHHHHHH Q lcl|NC_015456. 75 SYSRRVTSFSLSGEFSQTFGEVTKNQSENMMLSTPWGKIFE 115 (137) Q Consensus 75 ~~~g~v~S~s~~G~vSvSy~~~~~~~~~~wl~~T~YGq~y~ 115 (137) ..+.|+|.|. |.||.+|.+.--...-+||+ ||=+.=| T Consensus 62 -~~~nissRsM-gtVSYty~T~iP~~i~~~L~--PyRrlrw 98 (98) T protein:vir:96 62 -TNSNVSSRTM-GTVSYTFVTDLPKATYRHLK--PFRRLRW 98 (98) T ss_pred -CCCCcccccc-cceeeechhhhhHHHHHHhh--hhhhccC Confidence 3457888896 99999996532112223332 4433333 No 27 >protein:vir:94955 Length: 170 # NCBI annotation: hypothetical protein # Family: family:all:703 # MgeID: mge:1538 # MgeName: Xp15 # Cross-refs: genbank:acc:YP_239280;genbank:gi:66392062;genbank:GeneID:5076600 Probab=70.54 E-value=0.21 Score=24.33 Aligned_cols=118 Identities=9% Similarity=0.053 Sum_probs=63.0 Q ss_pred CCccccchHHHHHHHHhhh------ccCCCHHHHHHHHHHHHHHhCCC-CC-c--------------------------- Q lcl|NC_015456. 1 MNQENLIAVIEQMRKLVPA------LRKVPDETLYAWVEMAELFVCQK-TF-K--------------------------- 45 (137) Q Consensus 1 m~~~~~~~~i~~Fr~~~Pe------F~~vpD~~i~~~l~~A~~~v~~~-~~-g--------------------------- 45 (137) =+..|.--+++++++-+.. ....+|+..+..|-.|..+||.. +| | T Consensus 10 ~~~AnSYvtv~ea~aY~~~r~~~~~w~~~~~~~~e~aL~~A~dyId~~~~f~G~r~~~~Q~l~wPR~g~~~dg~~~~~~~ 89 (170) T protein:vir:94 10 SITANSYVTVAEANSYFDGSYGRPLWTSASEDEKASLVISASRYLDQMMAWIGAPTNPEQSMWWPCKNAVIGGMTLSQVS 89 (170) T ss_pred CCcccceecHHHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHhccccccccccCCcchhhcccccCcccCccccccch Confidence 2233334457777775432 23578999999999999999853 22 1 Q ss_pred --hHHHHHHHHHHHHHHHHhccccccccccccccccceeeeeccceeEeeecccCCcchhhhhcCHHHHHHHHHHHHhcC Q lcl|NC_015456. 46 --DAYVKALALYALHLAFLDGALKGEDEDIESYSRRVTSFSLSGEFSQTFGEVTKNQSENMMLSTPWGKIFEQLKARRRG 123 (137) Q Consensus 46 --~~~~~a~~ll~AH~l~l~~~~~~~~~~~~~~~g~v~S~s~~G~vSvSy~~~~~~~~~~wl~~T~YGq~y~~L~r~~g~ 123 (137) +..++|.+.++.-++ ++... .....+.|+|.++ |+++|+|+..+.+ ++.|. ..++|++=+.. T Consensus 90 IP~~V~~Aq~elA~~~~--~~~~~-----~~~~~~~v~~~kV-G~i~veY~~~~~~-------~~~~~-~v~~LL~p~l~ 153 (170) T protein:vir:94 90 IPVKVKIAVFELAYFML--ESGAA-----LSFADQTIDSVKV-GTIRVEFTKNSTD-------AGLPT-FVEAMLSGFGS 153 (170) T ss_pred hhHHHHHHHHHHHHHHH--hCccc-----CcccccceeeEec-ceeEEEecCCCCC-------CccHH-HHHHHhhhhhc Confidence 223455555555333 22211 1112345789996 9999999854432 22333 33567665543 Q ss_pred CCc--cccC----Cccc Q lcl|NC_015456. 124 RFA--LMTG----LRGG 134 (137) Q Consensus 124 Gg~--~~~g----~~~~ 134 (137) +-. --++ +.+| T Consensus 154 ~~~~g~~~~~~~~~~r~ 170 (170) T protein:vir:94 154 PVLYGSNAARSIDLVRA 170 (170) T ss_pred cccccccccceeeeecC Confidence 211 1111 1222 No 28 >protein:vir:95176 Length: 172 # NCBI annotation: hypothetical protein ORF013 # Family: family:all:703 # MgeID: mge:1552 # MgeName: PA73 # Cross-refs: genbank:acc:YP_001293420;genbank:gi:148912841;genbank:GeneID:5228251 Probab=68.39 E-value=0.24 Score=24.00 Aligned_cols=120 Identities=12% Similarity=0.067 Sum_probs=62.3 Q ss_pred CCccccchHHHHHHHHhhhcc---CCCHHHHHHHHHHHHHHhCC--CCC-c----------------------------- Q lcl|NC_015456. 1 MNQENLIAVIEQMRKLVPALR---KVPDETLYAWVEMAELFVCQ--KTF-K----------------------------- 45 (137) Q Consensus 1 m~~~~~~~~i~~Fr~~~PeF~---~vpD~~i~~~l~~A~~~v~~--~~~-g----------------------------- 45 (137) =+..|.--+++++++.+-+.. ..+|+..+..|-.|..+|+. -+| | T Consensus 13 ~~~anSYvtv~ea~aY~~~rg~~~~~~~~~ke~aL~~A~dyid~~~~~f~G~r~~~~Q~l~wPR~g~~~~~~~v~~~~IP 92 (172) T protein:vir:95 13 VTNANSYVSVADARIYASNRGVELPLDDDELAAMLIRSTDYLEAQACRFQGKPTSTTQALQWPRTGVFLNEDEVPSNVIP 92 (172) T ss_pred CCcccccccHHHHHHHHHhcCCcCCCChHHHHHHHHHHHHHhhccCCceeeeecCCcccccCCcCCcccCcccccccchh Confidence 123344446888888655443 25788889999999999984 122 2 Q ss_pred hHHHHHHHHHHHHHHHHhccccccccccccccccceeeeeccceeEeeecccCCcchhhhhcCHHHHHHHHHHHHh---- Q lcl|NC_015456. 46 DAYVKALALYALHLAFLDGALKGEDEDIESYSRRVTSFSLSGEFSQTFGEVTKNQSENMMLSTPWGKIFEQLKARR---- 121 (137) Q Consensus 46 ~~~~~a~~ll~AH~l~l~~~~~~~~~~~~~~~g~v~S~s~~G~vSvSy~~~~~~~~~~wl~~T~YGq~y~~L~r~~---- 121 (137) +..+.|.+.++.- .+++..- .......+.|+|.++ |+|+|+|+.++.+. ..+.|- .--+|++-+ T Consensus 93 ~~V~~A~~elA~~--~~~~~~~---~~~~~~~~~vk~~kV-G~I~veY~~~~~~~-----~~~~~~-~v~~LL~p~l~~~ 160 (172) T protein:vir:95 93 KSLIAAQVQLTMA--INAGFDL---QPNVSPQDYVTREKV-GPIETEYADPLSVG-----IMPTFT-AANALLAPLFGEC 160 (172) T ss_pred HHHHHHHHHHHHH--HHcCccc---cccCCcccceeEEec-cceEEeeccCCCCC-----CcccHH-HHHHHHhhhhccc Confidence 1234455555542 2222110 111223456899996 99999997654432 123332 233444433 Q ss_pred cCCCccccCCcccccC Q lcl|NC_015456. 122 RGRFALMTGLRGGCHQ 137 (137) Q Consensus 122 g~Gg~~~~g~~~~c~~ 137 (137) |.+.+-+ +-.| T Consensus 161 ~~~~~~~-----r~~r 171 (172) T protein:vir:95 161 ASNKFAL-----RTIR 171 (172) T ss_pred CCcceee-----EEEe Confidence 1111111 2223 No 29 >protein:vir:96281 Length: 104 # NCBI annotation: ORF047 # Family: family:all:789 # ACLAME annotation(s): phi:0000067 - phage portal associated protein # MgeID: mge:1612 # MgeName: ROSA # Cross-refs: genbank:acc:YP_240313;genbank:gi:66396008;genbank:GeneID:5133358 Probab=66.22 E-value=0.046 Score=27.93 Aligned_cols=97 Identities=12% Similarity=0.193 Sum_probs=58.2 Q ss_pred CCccccchHHHHHHHHh-hhccC-----CCHHHHHHHHHHHHHHhCCCCCch-HHHHHHHHHHHHHHHHhcccccccccc Q lcl|NC_015456. 1 MNQENLIAVIEQMRKLV-PALRK-----VPDETLYAWVEMAELFVCQKTFKD-AYVKALALYALHLAFLDGALKGEDEDI 73 (137) Q Consensus 1 m~~~~~~~~i~~Fr~~~-PeF~~-----vpD~~i~~~l~~A~~~v~~~~~g~-~~~~a~~ll~AH~l~l~~~~~~~~~~~ 73 (137) |..+ +.+.+- -...| +=...|..+++.|+.+ |+..|++ -+.-++..++|-.+.-+ T Consensus 1 Md~~-------dVK~l~~~~~~d~~~D~~~~~li~~y~e~aedy-Cn~~F~~~~lP~gV~~fvA~~iky~---------- 62 (104) T protein:vir:96 1 MDAK-------DVKMINGLSLNDSSNDEQIKYLIEEYKSVAEDY-CNQKFDDKAVPSGVKKFIAECIKFG---------- 62 (104) T ss_pred CCHH-------HHHHHhCCCCCCcccHHHHHHHHHHHHHHHHHh-cCCCCCCCCCCccHHHHHHHHHhhC---------- Confidence 5433 223321 01111 1245678889999988 5668876 67888999999988631 Q ss_pred ccccccceeeeeccceeEeeecccCCcchhhhhcCHHHHHHHHHHHHhcCCCccc Q lcl|NC_015456. 74 ESYSRRVTSFSLSGEFSQTFGEVTKNQSENMMLSTPWGKIFEQLKARRRGRFALM 128 (137) Q Consensus 74 ~~~~g~v~S~s~~G~vSvSy~~~~~~~~~~wl~~T~YGq~y~~L~r~~g~Gg~~~ 128 (137) ..+.|+|.|. |+||.||.+.--...-+||+ .. |++.-|+++| T Consensus 63 --~~~NissRSM-GtVSYTy~t~iP~~i~~~Lk---------PY-Rklr~~~~~~ 104 (104) T protein:vir:96 63 --TTGNISARTM-GTVSYTYVTDIPSSAYAYLL---------PY-RKLSWGKRYV 104 (104) T ss_pred --CCCCcccccc-cceeecccchhHHHHHHhhh---------hh-hhhcccccCC Confidence 3457889997 99999996522212223332 22 3444467777 No 30 >protein:vir:95891 Length: 104 # NCBI annotation: ORF051 # Family: family:all:789 # ACLAME annotation(s): phi:0000067 - phage portal associated protein # MgeID: mge:1588 # MgeName: 71 # Cross-refs: genbank:acc:YP_240387;genbank:gi:66396087;genbank:GeneID:5133402 Probab=66.22 E-value=0.046 Score=27.93 Aligned_cols=97 Identities=12% Similarity=0.193 Sum_probs=58.2 Q ss_pred CCccccchHHHHHHHHh-hhccC-----CCHHHHHHHHHHHHHHhCCCCCch-HHHHHHHHHHHHHHHHhcccccccccc Q lcl|NC_015456. 1 MNQENLIAVIEQMRKLV-PALRK-----VPDETLYAWVEMAELFVCQKTFKD-AYVKALALYALHLAFLDGALKGEDEDI 73 (137) Q Consensus 1 m~~~~~~~~i~~Fr~~~-PeF~~-----vpD~~i~~~l~~A~~~v~~~~~g~-~~~~a~~ll~AH~l~l~~~~~~~~~~~ 73 (137) |..+ +.+.+- -...| +=...|..+++.|+.+ |+..|++ -+.-++..++|-.+.-+ T Consensus 1 Md~~-------dVK~l~~~~~~d~~~D~~~~~li~~y~e~aedy-Cn~~F~~~~lP~gV~~fvA~~iky~---------- 62 (104) T protein:vir:95 1 MDAK-------DVKMINGLSLNDSSNDEQIKYLIEEYKSVAEDY-CNQKFDDKAVPSGVKKFIAECIKFG---------- 62 (104) T ss_pred CCHH-------HHHHHhCCCCCCcccHHHHHHHHHHHHHHHHHh-cCCCCCCCCCCccHHHHHHHHHhhC---------- Confidence 5433 223321 01111 1245678889999988 5668876 67888999999988631 Q ss_pred ccccccceeeeeccceeEeeecccCCcchhhhhcCHHHHHHHHHHHHhcCCCccc Q lcl|NC_015456. 74 ESYSRRVTSFSLSGEFSQTFGEVTKNQSENMMLSTPWGKIFEQLKARRRGRFALM 128 (137) Q Consensus 74 ~~~~g~v~S~s~~G~vSvSy~~~~~~~~~~wl~~T~YGq~y~~L~r~~g~Gg~~~ 128 (137) ..+.|+|.|. |+||.||.+.--...-+||+ .. |++.-|+++| T Consensus 63 --~~~NissRSM-GtVSYTy~t~iP~~i~~~Lk---------PY-Rklr~~~~~~ 104 (104) T protein:vir:95 63 --TTGNISARTM-GTVSYTYVTDIPSSAYAYLL---------PY-RKLSWGKRYV 104 (104) T ss_pred --CCCCcccccc-cceeecccchhHHHHHHhhh---------hh-hhhcccccCC Confidence 3457889997 99999996522212223332 22 3444467777 No 31 >protein:vir:97329 Length: 104 # NCBI annotation: ORF048 # Family: family:all:789 # ACLAME annotation(s): phi:0000067 - phage portal associated protein # MgeID: mge:1666 # MgeName: 52A # Cross-refs: genbank:acc:YP_240613;genbank:gi:66396311;genbank:GeneID:5133685 Probab=65.73 E-value=0.048 Score=27.82 Aligned_cols=97 Identities=12% Similarity=0.219 Sum_probs=58.3 Q ss_pred CCccccchHHHHHHHHhh-hccC-----CCHHHHHHHHHHHHHHhCCCCCch-HHHHHHHHHHHHHHHHhcccccccccc Q lcl|NC_015456. 1 MNQENLIAVIEQMRKLVP-ALRK-----VPDETLYAWVEMAELFVCQKTFKD-AYVKALALYALHLAFLDGALKGEDEDI 73 (137) Q Consensus 1 m~~~~~~~~i~~Fr~~~P-eF~~-----vpD~~i~~~l~~A~~~v~~~~~g~-~~~~a~~ll~AH~l~l~~~~~~~~~~~ 73 (137) |..+ +.+.+-- ...| +=...|..+++.|+.+ |+..|++ -+.-++..++|-.+.-+ T Consensus 1 Md~~-------dVK~l~~~~~~d~~~D~~~~~li~~y~e~aedy-Cn~~F~~~~lP~gV~~fvA~~iky~---------- 62 (104) T protein:vir:97 1 MDTK-------DVKMINGLSLNDSSNDEQIEYLIEEYKSVAEDY-CNQKFDDKAVPSGVKKFIAECIKFG---------- 62 (104) T ss_pred CCHH-------HHHHHhCCCCCCcccHHHHHHHHHHHHHHHHHh-cCCCCCCCCCCccHHHHHHHHHhhC---------- Confidence 5432 2333210 1111 1245678889999988 5668876 67888999999988631 Q ss_pred ccccccceeeeeccceeEeeecccCCcchhhhhcCHHHHHHHHHHHHhcCCCccc Q lcl|NC_015456. 74 ESYSRRVTSFSLSGEFSQTFGEVTKNQSENMMLSTPWGKIFEQLKARRRGRFALM 128 (137) Q Consensus 74 ~~~~g~v~S~s~~G~vSvSy~~~~~~~~~~wl~~T~YGq~y~~L~r~~g~Gg~~~ 128 (137) ..+.|+|.|. |+||.||.+.--...-+||+ | .|++.-|+++| T Consensus 63 --~~~NissRSM-GtVSYty~t~iP~~i~~~Lk--P--------YRklr~~~~~~ 104 (104) T protein:vir:97 63 --TTGNISARTM-GTVSYTYVTDIPSSAYAYLM--P--------YRKLSWGKRYV 104 (104) T ss_pred --CCCCcccccc-cceeecccchhHHHHHHhhh--h--------hhhhcccccCC Confidence 3457889997 99999996522212223332 2 23444467777 No 32 >protein:vir:9706 Length: 100 # NCBI annotation: hypothetical protein # Family: family:all:316 # MgeID: mge:174 # MgeName: 315.2 # Cross-refs: genbank:acc:NP_795468;genbank:gi:28876223;genbank:GeneID:1257767 Probab=65.42 E-value=0.09 Score=26.32 Aligned_cols=87 Identities=11% Similarity=0.112 Sum_probs=45.7 Q ss_pred CCccccchHHHHHHHHhhhccCCCHHHHHHHHHHHHHHhCCC--------CCc--hHHHHHHHHHHHHHHHHhccccccc Q lcl|NC_015456. 1 MNQENLIAVIEQMRKLVPALRKVPDETLYAWVEMAELFVCQK--------TFK--DAYVKALALYALHLAFLDGALKGED 70 (137) Q Consensus 1 m~~~~~~~~i~~Fr~~~PeF~~vpD~~i~~~l~~A~~~v~~~--------~~g--~~~~~a~~ll~AH~l~l~~~~~~~~ 70 (137) |+.. -+-++.+|.-.-==-+..|+.|+.+++-|+.+++.. .|. ..+.+|+.++++|+---.+.. ... T Consensus 1 m~~t--~e~L~~lK~~lRID~d~DD~li~~~i~~Ae~~I~~AV~~~~t~~~~~~~~rF~~Av~~Lv~~~Y~nR~~t-~d~ 77 (100) T protein:vir:97 1 MAVS--KELLNSVKLYCKIDFDFENDIIKEMIESAQEQICFAIDDGSTPEMFEGHAKFALAVKKQVKEEYDHRGLS-ADS 77 (100) T ss_pred Cccc--HHHHHHHHHHcCCCCCcchHHHHHHHHHHHHHHhhhccCCCCcchhhccchHHHHHHHHHHHHHHhcccc-chh Confidence 6543 123444444221111579999999999999999532 122 356799999999998654321 111 Q ss_pred cccc---cccccceeeeecccee Q lcl|NC_015456. 71 EDIE---SYSRRVTSFSLSGEFS 90 (137) Q Consensus 71 ~~~~---~~~g~v~S~s~~G~vS 90 (137) .-.. +....|..-...|+-| T Consensus 78 ~~~~ip~gv~~lI~QLR~~~~~~ 100 (100) T protein:vir:97 78 FRYPLANGVLNIIHQLRLRGDDS 100 (100) T ss_pred hcchhhhhHHHHHHHHHHhhcCC Confidence 0000 1111222222234333 No 33 >protein:vir:95004 Length: 169 # NCBI annotation: hypothetical protein # Family: family:all:703 # MgeID: mge:1547 # MgeName: KS7 # Cross-refs: genbank:acc:YP_224025;genbank:gi:62327312;genbank:GeneID:5176832 Probab=58.15 E-value=0.42 Score=22.66 Aligned_cols=122 Identities=13% Similarity=0.054 Sum_probs=63.4 Q ss_pred CC----------ccccchHHHHHHHHhhhccC---CCHHHHHHHHHHHHHHhCCC--CC-ch------------------ Q lcl|NC_015456. 1 MN----------QENLIAVIEQMRKLVPALRK---VPDETLYAWVEMAELFVCQK--TF-KD------------------ 46 (137) Q Consensus 1 m~----------~~~~~~~i~~Fr~~~PeF~~---vpD~~i~~~l~~A~~~v~~~--~~-g~------------------ 46 (137) |+ ..|.--+++++++.+-+... .+|+..+..|-.|..+||.- +| |+ T Consensus 1 M~liv~~~~g~~~anSYvt~~ea~aY~~~rg~~~~~dd~~~e~aL~~A~~yid~~~~~f~G~r~~~~Q~l~wPRtg~~~~ 80 (169) T protein:vir:95 1 MPLIVETGQGLPNADSYVSLEDGRALAAKYGLELPEDDIAAEASLRNGAVYVGLFESQMCGRRVSANQALAFPRTGIDLH 80 (169) T ss_pred CeeEEeCCCCCCcccccccHHHHHHHHHHcCCcCCCCHHHHHHHHHHHHHHhhccccccccccCCcchhhccccCCceec Confidence 54 34445568888887654432 35778899999999999852 23 21 Q ss_pred -----------HHHHHHHHHHHHHHHHhccccccccccccccccceeeeeccceeEeeecccCCcchhhhhcCHHHHHHH Q lcl|NC_015456. 47 -----------AYVKALALYALHLAFLDGALKGEDEDIESYSRRVTSFSLSGEFSQTFGEVTKNQSENMMLSTPWGKIFE 115 (137) Q Consensus 47 -----------~~~~a~~ll~AH~l~l~~~~~~~~~~~~~~~g~v~S~s~~G~vSvSy~~~~~~~~~~wl~~T~YGq~y~ 115 (137) ..+.|.+.++.-.+. +.... .....++|.+.+++|.++|+|+.++..... ..-+. -- T Consensus 81 g~~~~~~~IP~~V~~A~~elA~~~~~--g~~~~----~~~~~~~v~~e~v~G~i~veY~~~~~~~~~---~~~~a---~~ 148 (169) T protein:vir:95 81 GFPQPSNVIPSLVIQAQVMAAVEYGA--GTDVR----GSTDGREVQTERVEGAVTVSYFKNGYSGGT---VSITA---AD 148 (169) T ss_pred ccccccccchHHHHHHHHHHHHHHHc--Ccccc----CCCCccceeeeeeccceeEeecCCCCcCcc---ccHHH---HH Confidence 123344444433332 21111 112335677777789999999865443211 11111 22 Q ss_pred HHHHHh--cCCCccccCCccc Q lcl|NC_015456. 116 QLKARR--RGRFALMTGLRGG 134 (137) Q Consensus 116 ~L~r~~--g~Gg~~~~g~~~~ 134 (137) +|++-+ |.|+.+.--..+| T Consensus 149 ~LL~p~l~g~~g~~~i~~~rg 169 (169) T protein:vir:95 149 DALRPLLCGSNNAYSFNVFRG 169 (169) T ss_pred HhhhhhcccCCCcceeeeecC Confidence 455444 4444222222333 No 34 >protein:vir:94798 Length: 104 # NCBI annotation: ORF043 # Family: family:all:789 # ACLAME annotation(s): phi:0000067 - phage portal associated protein # MgeID: mge:1531 # MgeName: 29 # Cross-refs: genbank:acc:YP_240538;genbank:gi:66396233;genbank:GeneID:5133578 Probab=58.06 E-value=0.19 Score=24.56 Aligned_cols=97 Identities=12% Similarity=0.215 Sum_probs=58.3 Q ss_pred CCccccchHHHHHHHHhh-hccC-----CCHHHHHHHHHHHHHHhCCCCCch-HHHHHHHHHHHHHHHHhcccccccccc Q lcl|NC_015456. 1 MNQENLIAVIEQMRKLVP-ALRK-----VPDETLYAWVEMAELFVCQKTFKD-AYVKALALYALHLAFLDGALKGEDEDI 73 (137) Q Consensus 1 m~~~~~~~~i~~Fr~~~P-eF~~-----vpD~~i~~~l~~A~~~v~~~~~g~-~~~~a~~ll~AH~l~l~~~~~~~~~~~ 73 (137) |..+ +.+.+-- ...| +=...|..+++.|+.+ |+..|++ -+.-++..++|-.+.-+ T Consensus 1 Md~~-------dVK~l~~~~~~d~~~D~~~~~li~~y~e~aedy-Cn~~F~~~~lP~gVk~fvA~~iky~---------- 62 (104) T protein:vir:94 1 MDTK-------DVKMINGLSLNDSSNDEQIEYLIEEYKSVAEDY-CNQKFDDKAVPSGVKKFIAECIKFG---------- 62 (104) T ss_pred CCHH-------HHHHHhCCCCCCcccHHHHHHHHHHHHHHHHHh-cCCCCCCCCCCccHHHHHHHHHhhC---------- Confidence 4432 2333210 1111 1245678889999988 5668876 67888999999988631 Q ss_pred ccccccceeeeeccceeEeeecccCCcchhhhhcCHHHHHHHHHHHHhcCCCccc Q lcl|NC_015456. 74 ESYSRRVTSFSLSGEFSQTFGEVTKNQSENMMLSTPWGKIFEQLKARRRGRFALM 128 (137) Q Consensus 74 ~~~~g~v~S~s~~G~vSvSy~~~~~~~~~~wl~~T~YGq~y~~L~r~~g~Gg~~~ 128 (137) ..+.|+|.|. |+||.||.+.--...-+||+ | .|++.-|+++| T Consensus 63 --~~~NissRSM-GtVSYTy~T~iP~~i~~~Lk--P--------YRklr~~~~~~ 104 (104) T protein:vir:94 63 --TTGNISARTM-GTVSYTYITDIPSSAYAYLM--P--------YRKLSWGKRYV 104 (104) T ss_pred --CCCCcccccc-cceeecccchhHHHHHHhhh--h--------hhhhcccccCC Confidence 3457889997 99999996522212223332 2 24444467777 No 35 >protein:vir:96831 Length: 98 # NCBI annotation: ORF052 # Family: family:all:789 # ACLAME annotation(s): phi:0000067 - phage portal associated protein # MgeID: mge:1642 # MgeName: EW # Cross-refs: genbank:acc:YP_240159;genbank:gi:66395852;genbank:GeneID:5133172 Probab=55.71 E-value=0.082 Score=26.53 Aligned_cols=92 Identities=18% Similarity=0.273 Sum_probs=55.3 Q ss_pred CCccccchHHHHHHHHhh-hccC-----CCHHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHhccccccccccc Q lcl|NC_015456. 1 MNQENLIAVIEQMRKLVP-ALRK-----VPDETLYAWVEMAELFVCQKTFKDAYVKALALYALHLAFLDGALKGEDEDIE 74 (137) Q Consensus 1 m~~~~~~~~i~~Fr~~~P-eF~~-----vpD~~i~~~l~~A~~~v~~~~~g~~~~~a~~ll~AH~l~l~~~~~~~~~~~~ 74 (137) |..+ +.+.+-- ...| +=...|..|++.|+.+ |+..|.+-+.-++..|+|-.+.-+ T Consensus 1 Md~~-------dVK~l~~~~~~d~~~D~~~~~li~~y~e~aedy-CN~~F~~~lP~gVkkfvAe~iky~----------- 61 (98) T protein:vir:96 1 MDAL-------DVKMLNGTRIDDVSNDDVINKLILAYKQVAEEY-CNQVFGDPLPGGVKKFIAECIKYG----------- 61 (98) T ss_pred CCHH-------HHHHHhCCCCCCcccHHHHHHHHHHHHHHHHHH-hCCcccccCCccHHHHHHHHHhhc----------- Confidence 4432 2333210 1111 1245678889999988 566888888899999999988631 Q ss_pred cccccceeeeeccceeEeeecccCCcchhhhhcCHHHHHHH Q lcl|NC_015456. 75 SYSRRVTSFSLSGEFSQTFGEVTKNQSENMMLSTPWGKIFE 115 (137) Q Consensus 75 ~~~g~v~S~s~~G~vSvSy~~~~~~~~~~wl~~T~YGq~y~ 115 (137) ..+.|+|.|. |.||.+|.+.--...-+||+ ||=+.=| T Consensus 62 -~~~nissRsM-gtVSYty~T~iP~~i~~~L~--PyRrlrw 98 (98) T protein:vir:96 62 -VSGNIASRSM-GTVSYTYVTDVPSSMYKYLK--PYRKLRW 98 (98) T ss_pred -ccCCcccccc-cceeeechhhhhHHHHHHhh--hhhhccC Confidence 2357788896 99999997532212223332 4433333 No 36 >protein:vir:105327 Length: 104 # NCBI annotation: putative head morphogenesis protein # Family: family:all:789 # ACLAME annotation(s): phi:0000067 - phage portal associated protein # MgeID: mge:1679 # MgeName: PH15 # Cross-refs: genbank:acc:YP_950671;genbank:gi:119967841;genbank:GeneID:4643206 Probab=55.51 E-value=0.23 Score=24.06 Aligned_cols=97 Identities=16% Similarity=0.224 Sum_probs=58.2 Q ss_pred CCccccchHHHHHHHHh-hhccC-----CCHHHHHHHHHHHHHHhCCCCCch-HHHHHHHHHHHHHHHHhcccccccccc Q lcl|NC_015456. 1 MNQENLIAVIEQMRKLV-PALRK-----VPDETLYAWVEMAELFVCQKTFKD-AYVKALALYALHLAFLDGALKGEDEDI 73 (137) Q Consensus 1 m~~~~~~~~i~~Fr~~~-PeF~~-----vpD~~i~~~l~~A~~~v~~~~~g~-~~~~a~~ll~AH~l~l~~~~~~~~~~~ 73 (137) |..+ +.+.+- -...| +=...|..+++.|+.+ |+..|++ -+.-++..++|-.+.- T Consensus 1 Md~~-------dVK~l~~~~~~d~~~D~~~~~li~~y~e~aedy-Cn~~F~~~~lP~gV~~fvA~~iky----------- 61 (104) T protein:vir:10 1 MNAQ-------DVKLLNNLSLDDTSNDETIELLIEKYLNVAEEY-CNQTFNRKSLPSNVEKFIANCIKQ----------- 61 (104) T ss_pred CCHH-------HHHHHhCCCCCCcccHHHHHHHHHHHHHHHHHh-cCCCCCCCCCCccHHHHHHHHHhh----------- Confidence 4432 233321 01111 1245678889999988 5668876 6788899999998863 Q ss_pred ccccccceeeeeccceeEeeecccCCcchhhhhcCHHHHHHHHHHHHhcCCCccc Q lcl|NC_015456. 74 ESYSRRVTSFSLSGEFSQTFGEVTKNQSENMMLSTPWGKIFEQLKARRRGRFALM 128 (137) Q Consensus 74 ~~~~g~v~S~s~~G~vSvSy~~~~~~~~~~wl~~T~YGq~y~~L~r~~g~Gg~~~ 128 (137) ...+.|+|.|. |+||.||.+.--...-+||+ .. |++.-|+++| T Consensus 62 -~~~~NissRSM-GtVSyTy~t~iP~~i~~~L~---------PY-Rklr~~~~~~ 104 (104) T protein:vir:10 62 -GTTSNISSRTM-GTVSYTFVTDLPKETYGYLK---------PF-RRLRWTGYHV 104 (104) T ss_pred -cCCCCcccccc-cceeecccchhHHHHHHhhh---------hh-hhhccccccC Confidence 13457889997 99999996522212223332 22 3444467777 No 37 >protein:vir:107119 Length: 104 # NCBI annotation: conserved phage protein # Family: family:all:789 # ACLAME annotation(s): phi:0000067 - phage portal associated protein # MgeID: mge:1571 # MgeName: CNPH82 # Cross-refs: genbank:acc:YP_950608;genbank:gi:119953688;genbank:GeneID:4643128 Probab=55.51 E-value=0.23 Score=24.06 Aligned_cols=97 Identities=16% Similarity=0.224 Sum_probs=58.2 Q ss_pred CCccccchHHHHHHHHh-hhccC-----CCHHHHHHHHHHHHHHhCCCCCch-HHHHHHHHHHHHHHHHhcccccccccc Q lcl|NC_015456. 1 MNQENLIAVIEQMRKLV-PALRK-----VPDETLYAWVEMAELFVCQKTFKD-AYVKALALYALHLAFLDGALKGEDEDI 73 (137) Q Consensus 1 m~~~~~~~~i~~Fr~~~-PeF~~-----vpD~~i~~~l~~A~~~v~~~~~g~-~~~~a~~ll~AH~l~l~~~~~~~~~~~ 73 (137) |..+ +.+.+- -...| +=...|..+++.|+.+ |+..|++ -+.-++..++|-.+.- T Consensus 1 Md~~-------dVK~l~~~~~~d~~~D~~~~~li~~y~e~aedy-Cn~~F~~~~lP~gV~~fvA~~iky----------- 61 (104) T protein:vir:10 1 MNAQ-------DVKLLNNLSLDDTSNDETIELLIEKYLNVAEEY-CNQTFNRKSLPSNVEKFIANCIKQ----------- 61 (104) T ss_pred CCHH-------HHHHHhCCCCCCcccHHHHHHHHHHHHHHHHHh-cCCCCCCCCCCccHHHHHHHHHhh----------- Confidence 4432 233321 01111 1245678889999988 5668876 6788899999998863 Q ss_pred ccccccceeeeeccceeEeeecccCCcchhhhhcCHHHHHHHHHHHHhcCCCccc Q lcl|NC_015456. 74 ESYSRRVTSFSLSGEFSQTFGEVTKNQSENMMLSTPWGKIFEQLKARRRGRFALM 128 (137) Q Consensus 74 ~~~~g~v~S~s~~G~vSvSy~~~~~~~~~~wl~~T~YGq~y~~L~r~~g~Gg~~~ 128 (137) ...+.|+|.|. |+||.||.+.--...-+||+ .. |++.-|+++| T Consensus 62 -~~~~NissRSM-GtVSyTy~t~iP~~i~~~L~---------PY-Rklr~~~~~~ 104 (104) T protein:vir:10 62 -GTTSNISSRTM-GTVSYTFVTDLPKETYGYLK---------PF-RRLRWTGYHV 104 (104) T ss_pred -cCCCCcccccc-cceeecccchhHHHHHHhhh---------hh-hhhccccccC Confidence 13457889997 99999996522212223332 22 3444467777 No 38 >protein:vir:78383 Length: 169 # NCBI annotation: hypothetical protein # Family: family:all:703 # MgeID: mge:1851 # MgeName: SETP3 # Cross-refs: genbank:acc:YP_001110841;genbank:gi:134288602;genbank:GeneID:5179646 Probab=53.56 E-value=0.53 Score=22.12 Aligned_cols=122 Identities=12% Similarity=0.050 Sum_probs=64.7 Q ss_pred CC----------ccccchHHHHHHHHhhhccC---CCHHHHHHHHHHHHHHhCCC--CC-c------------------- Q lcl|NC_015456. 1 MN----------QENLIAVIEQMRKLVPALRK---VPDETLYAWVEMAELFVCQK--TF-K------------------- 45 (137) Q Consensus 1 m~----------~~~~~~~i~~Fr~~~PeF~~---vpD~~i~~~l~~A~~~v~~~--~~-g------------------- 45 (137) |+ ..|.--+++++++.+-+... -.|+..+..|-.|..+||.- +| | T Consensus 1 MaliV~~~~g~~~anSYvtv~~a~aY~~~rg~~~~~d~~~~e~aL~~A~~yid~~~~~f~G~r~~~~Q~l~wPRtg~~~~ 80 (169) T protein:vir:78 1 MPLIVETGQGIPNADSYVSLEDGRALAAKYGLELPEDDTAAEAALRNGAVYVGLFESQMCGRRVSANQALAFPRTGVTLH 80 (169) T ss_pred CeeEeeCCCCCccccccccHHHHHHHHHHcCCcCCCChHHHHHHHHHHHHHhhhccccceeeeCCcccccccccCCceec Confidence 55 34444568888887655433 35888999999999999842 23 2 Q ss_pred ----------hHHHHHHHHHHHHHHHHhccccccccccccccccceeeeeccceeEeeecccCCcchhhhhcCHHHHHHH Q lcl|NC_015456. 46 ----------DAYVKALALYALHLAFLDGALKGEDEDIESYSRRVTSFSLSGEFSQTFGEVTKNQSENMMLSTPWGKIFE 115 (137) Q Consensus 46 ----------~~~~~a~~ll~AH~l~l~~~~~~~~~~~~~~~g~v~S~s~~G~vSvSy~~~~~~~~~~wl~~T~YGq~y~ 115 (137) ...+.|.+.++.-+ +++... -.....+.|++.+++|.++|+|+.++.... +..|- .-- T Consensus 81 g~~~~~~~IP~~v~~A~~elA~~~--~~g~~~----~~~~~~~~v~~e~v~G~i~veY~~~~~~~~-----~~~~~-~~~ 148 (169) T protein:vir:78 81 GFPQPSNVIPPLVIQAQVMAAVEY--GAGTDV----RGSTDGREVQTERVEGAVTVSYFKNGYSGG-----TVSIT-TAD 148 (169) T ss_pred ccccccccchHHHHHHHHHHHHHH--hcCccc----CCCCCcceeEEEEecCceeEeecCCCCCCC-----cccHH-HHH Confidence 12233444444422 222111 112244678888888999999986554321 11111 112 Q ss_pred HHHHHh--cCCCccccCCccc Q lcl|NC_015456. 116 QLKARR--RGRFALMTGLRGG 134 (137) Q Consensus 116 ~L~r~~--g~Gg~~~~g~~~~ 134 (137) +|++-+ |.|+.+.--..+| T Consensus 149 ~LL~p~l~~~~g~~~i~~~rg 169 (169) T protein:vir:78 149 DALRPLLCGSNNAYSFNVFRG 169 (169) T ss_pred HHhhhhcccCCCcceeeeecC Confidence 444443 3333222222333 No 39 >protein:vir:7410 Length: 107 # NCBI annotation: hypothetical protein # Family: family:all:734 # ACLAME annotation(s): phi:0000018 - phage genome packaging # MgeID: mge:146 # MgeName: P335 # Cross-refs: genbank:acc:NP_839927;genbank:gi:30089897;genbank:GeneID:1260684 Probab=53.23 E-value=0.27 Score=23.73 Aligned_cols=89 Identities=15% Similarity=0.227 Sum_probs=46.8 Q ss_pred CCccccchHHHHHHHHhhhccCCCHHHHHHHHHHHHHHhCCC---C-----C------chHHHHHHHHHHHHHHHHhccc Q lcl|NC_015456. 1 MNQENLIAVIEQMRKLVPALRKVPDETLYAWVEMAELFVCQK---T-----F------KDAYVKALALYALHLAFLDGAL 66 (137) Q Consensus 1 m~~~~~~~~i~~Fr~~~PeF~~vpD~~i~~~l~~A~~~v~~~---~-----~------g~~~~~a~~ll~AH~l~l~~~~ 66 (137) |..+ +++||.-- -..+-+|+.|+.+|.-|+.+|... . | .++++.|+.+|++||-.-.... T Consensus 1 M~v~-----LdeiK~~L-RIDddDD~ll~~~i~aAe~yI~~Aig~~~~~~~fy~~e~~~~l~~~Avl~La~~wYeNR~at 74 (107) T protein:vir:74 1 MSVT-----VDDLLDQL-SEDDDRKPQLQIYFDTATAYVKNAVSSDTVDAPFFNVENVSPIYDVAVLSYSMDLWINRSTT 74 (107) T ss_pred Ceec-----HHHHHHHc-CCCCChhHHHHHHHHHHHHHHhhhcCCcccccccccccCcchHHHHHHHHHHHHHHHhcccc Confidence 6654 88888733 222448999999999999999421 1 1 2467889999999998653221 Q ss_pred cccccccccccccceeeeeccceeEeeec----ccCCcchhhhhcCH Q lcl|NC_015456. 67 KGEDEDIESYSRRVTSFSLSGEFSQTFGE----VTKNQSENMMLSTP 109 (137) Q Consensus 67 ~~~~~~~~~~~g~v~S~s~~G~vSvSy~~----~~~~~~~~wl~~T~ 109 (137) ...+- .| .++-+...-.|.. ...+. .+|. T Consensus 75 ------~~vp~-~v--~siI~QLRg~y~~~~e~~~~~~-----~~~~ 107 (107) T protein:vir:74 75 ------MPPTT-AV--DHMVGQLRGLYSSWKEEQGGQN-----LQTE 107 (107) T ss_pred ------ccccH-HH--HHHHHHHhhcccchhhhcCCCc-----ccCC Confidence 00010 01 0111222222321 11110 1122 No 40 >protein:vir:106596 Length: 128 # NCBI annotation: ORF042 # Family: family:all:372 # MgeID: mge:1557 # MgeName: 187 # Cross-refs: genbank:acc:YP_239495;genbank:gi:66395254;genbank:GeneID:4555750 Probab=52.32 E-value=0.56 Score=21.97 Aligned_cols=107 Identities=11% Similarity=0.134 Sum_probs=62.1 Q ss_pred CCccccchHHHHHHHHhhhccCCCHHHHHHHHHHHHHHhC----CC--CCchHHHHH-HHHHHHHHHHHhcccccccccc Q lcl|NC_015456. 1 MNQENLIAVIEQMRKLVPALRKVPDETLYAWVEMAELFVC----QK--TFKDAYVKA-LALYALHLAFLDGALKGEDEDI 73 (137) Q Consensus 1 m~~~~~~~~i~~Fr~~~PeF~~vpD~~i~~~l~~A~~~v~----~~--~~g~~~~~a-~~ll~AH~l~l~~~~~~~~~~~ 73 (137) |+.+..++++++.+.+---=.+..|+.|+.+|+.|...+. .+ ...+.++.. ..+-++++= +...+ T Consensus 13 ~~~~~~m~~Le~vK~~LgI~d~~~D~lL~~lI~~a~~~i~~~l~~~~~~iP~~L~~Iv~evaVkryN----R~g~E---- 84 (128) T protein:vir:10 13 LNSGEVMNYLDDVKSRIGLNDNEQDKQLNSIINNVAAELLSRLPVDTISIPDKLQFIVVEVSTKRYN----RIGAE---- 84 (128) T ss_pred ecHHHHHHHHHHHHHHhCCCCcchhhHHHHHHHHHHHHHHHHcCCChhhhhhhHHHHHHHHHHHHhc----ccCcc---- Confidence 9999999999999997644334679999999999997763 22 234444433 233333332 22222 Q ss_pred ccccccceeeeeccceeEeeecccCCcchhhhhcCHHHHHHHHHHHHhcCCCccccCCcccccC Q lcl|NC_015456. 74 ESYSRRVTSFSLSGEFSQTFGEVTKNQSENMMLSTPWGKIFEQLKARRRGRFALMTGLRGGCHQ 137 (137) Q Consensus 74 ~~~~g~v~S~s~~G~vSvSy~~~~~~~~~~wl~~T~YGq~y~~L~r~~g~Gg~~~~g~~~~c~~ 137 (137) +.+|.| ++-+|+||... -.-+|-..+-++++.-+.. +.|-.| T Consensus 85 -----G~~S~S-eeG~S~tf~dn---------d~~~Y~~~L~~y~~~~~~~-------~kG~v~ 126 (128) T protein:vir:10 85 -----GMSTDS-QDGRSNTFERN---------DFEEYQSIIDALYPKLDSS-------ERGSVN 126 (128) T ss_pred -----Ccceee-eCceeeeeccC---------CcchhHHHHHHHHhhccCC-------CCCcee Confidence 247888 56779999532 1234555555555432210 112222 No 41 >protein:vir:93740 Length: 104 # NCBI annotation: ORF047 # Family: family:all:789 # ACLAME annotation(s): phi:0000067 - phage portal associated protein # MgeID: mge:1475 # MgeName: 55 # Cross-refs: genbank:acc:YP_240461;genbank:gi:66396159;genbank:GeneID:5133509 Probab=49.74 E-value=0.11 Score=25.86 Aligned_cols=97 Identities=12% Similarity=0.214 Sum_probs=57.6 Q ss_pred CCccccchHHHHHHHHhh-hccC-----CCHHHHHHHHHHHHHHhCCCCCc-hHHHHHHHHHHHHHHHHhcccccccccc Q lcl|NC_015456. 1 MNQENLIAVIEQMRKLVP-ALRK-----VPDETLYAWVEMAELFVCQKTFK-DAYVKALALYALHLAFLDGALKGEDEDI 73 (137) Q Consensus 1 m~~~~~~~~i~~Fr~~~P-eF~~-----vpD~~i~~~l~~A~~~v~~~~~g-~~~~~a~~ll~AH~l~l~~~~~~~~~~~ 73 (137) |..+ +.+.+-- ...| +=+..|..+++.|+.+ |+..|+ +.+.-++..|+|-.+.-+ T Consensus 1 Md~~-------dVK~l~~~~~~d~~~D~~~~~li~~y~e~aedy-CN~~F~~~~lP~gVkkfvAe~iky~---------- 62 (104) T protein:vir:93 1 MDAK-------DVKMINGLSLNDSSNDEQIDYLIEEYKSVAEDY-CNQKFDDKEVPSGVKKFIAECIKFG---------- 62 (104) T ss_pred CCHH-------HHHHHhCCCCCCcccHHHHHHHHHHHHHHHHHH-hCCCCCCccCCccHHHHHHHHHhhC---------- Confidence 5433 2333210 1111 1255778899999988 555777 467889999999987631 Q ss_pred ccccccceeeeeccceeEeeecccCCcchhhhhcCHHHHHHHHHHHHhcCCCccc Q lcl|NC_015456. 74 ESYSRRVTSFSLSGEFSQTFGEVTKNQSENMMLSTPWGKIFEQLKARRRGRFALM 128 (137) Q Consensus 74 ~~~~g~v~S~s~~G~vSvSy~~~~~~~~~~wl~~T~YGq~y~~L~r~~g~Gg~~~ 128 (137) ..+.|+|.|. |.||.+|.+.--...-+||+ | . |+..=|+++| T Consensus 63 --~~~NissRsM-gtVSYTy~T~iP~~i~~~L~--P-------Y-Rrlrw~~~~~ 104 (104) T protein:vir:93 63 --TTGNISARTM-GTVSYTYVTDIPSSAYAYLL--P-------Y-RKLSWGKRYV 104 (104) T ss_pred --CCCCcccccc-cceeeechhhhhHHHHHhhh--h-------h-hhhcccccCC Confidence 3457788896 99999996522111223322 2 2 3334467777 No 42 >protein:vir:9928 Length: 118 # NCBI annotation: hypothetical protein # Family: family:all:372 # MgeID: mge:178 # MgeName: 315.6 # Cross-refs: genbank:acc:NP_795690;genbank:gi:28876458;genbank:GeneID:1258013 Probab=48.13 E-value=0.68 Score=21.50 Aligned_cols=104 Identities=12% Similarity=0.057 Sum_probs=50.6 Q ss_pred CCccccchHHHHHHHHhhhc---cCCCHHHHHHHHHHHHHHhCCC----------CCchHHHH-HHHHHHHHHHHHhccc Q lcl|NC_015456. 1 MNQENLIAVIEQMRKLVPAL---RKVPDETLYAWVEMAELFVCQK----------TFKDAYVK-ALALYALHLAFLDGAL 66 (137) Q Consensus 1 m~~~~~~~~i~~Fr~~~PeF---~~vpD~~i~~~l~~A~~~v~~~----------~~g~~~~~-a~~ll~AH~l~l~~~~ 66 (137) |.+|.+|+-| |.+ ... .+--|+.|+.+|+.|...+... ...+.++. ....-++|+ ++. T Consensus 1 md~~~~L~~v---K~~-lgI~~~D~~~D~lL~~~i~~a~~~i~~~l~~~~~~~~~eiP~~l~~iv~evav~ry----NR~ 72 (118) T protein:vir:99 1 MGDKQLIDDI---KLF-IGISKGDGAQDELITLAIYESKERVLAKLNEYSETEITKIPDRLRFIVRDVAIKRF----NRI 72 (118) T ss_pred CchhhHHHHH---HHH-hCCCCCchhhHHHHHHHHHHHHHHHHHHhccccccchhhhhHHHHHHHHHHHHHHh----cCc Confidence 9998665554 432 222 2345899999999999877321 13333332 233333443 122 Q ss_pred cccccccccccccceeeeeccceeEeeecccCCcchhhhhcCHHHHHHHHHHHHhcCCCccc Q lcl|NC_015456. 67 KGEDEDIESYSRRVTSFSLSGEFSQTFGEVTKNQSENMMLSTPWGKIFEQLKARRRGRFALM 128 (137) Q Consensus 67 ~~~~~~~~~~~g~v~S~s~~G~vSvSy~~~~~~~~~~wl~~T~YGq~y~~L~r~~g~Gg~~~ 128 (137) ..+ +++|.| ++.+|+||+.. -+.-..+++ .|.. -+..+..|. .+++ T Consensus 73 g~E---------G~~S~S-eeG~S~sf~~d-~~ey~~~l~--~~~~--~~~~~~~g~-v~Fi 118 (118) T protein:vir:99 73 NSE---------GAVEDS-EEGKTFKWDSY-LKEYESTLR--SAAI--GKVYSGKGV-ARFI 118 (118) T ss_pred CCc---------ccceee-cCCeeeeeccC-chhHHHHHH--HHhh--hcccCcCcc-eeeC Confidence 222 247888 56779999632 222333333 1111 000111222 2333 No 43 >protein:vir:95071 Length: 104 # NCBI annotation: ORF050 # Family: family:all:789 # ACLAME annotation(s): phi:0000067 - phage portal associated protein # MgeID: mge:1549 # MgeName: X2 # Cross-refs: genbank:acc:YP_240825;genbank:gi:66394717;genbank:GeneID:5133865 Probab=46.75 E-value=0.13 Score=25.37 Aligned_cols=97 Identities=10% Similarity=0.214 Sum_probs=57.3 Q ss_pred CCccccchHHHHHHHHh-hhccC-----CCHHHHHHHHHHHHHHhCCCCCc-hHHHHHHHHHHHHHHHHhcccccccccc Q lcl|NC_015456. 1 MNQENLIAVIEQMRKLV-PALRK-----VPDETLYAWVEMAELFVCQKTFK-DAYVKALALYALHLAFLDGALKGEDEDI 73 (137) Q Consensus 1 m~~~~~~~~i~~Fr~~~-PeF~~-----vpD~~i~~~l~~A~~~v~~~~~g-~~~~~a~~ll~AH~l~l~~~~~~~~~~~ 73 (137) |..+ +.+.+- -...| +=...|..+++.|+.+ |+..|+ +.+.-++..|+|-.+.-+ T Consensus 1 Md~~-------dVK~l~~~~~~d~~~D~~~~~li~~y~e~aedy-CN~~F~~~~lP~gVkkfvAe~iky~---------- 62 (104) T protein:vir:95 1 MDAK-------DVKMINGLSLNDSSNDEQIEYLIEEYKSVAEDY-CNQKFDDKEVPSGVKKFIAECIKFG---------- 62 (104) T ss_pred CCHH-------HHHHHhCCCCCCcccHHHHHHHHHHHHHHHHHH-hCCCCCCccCCccHHHHHHHHHhhC---------- Confidence 5433 233321 01111 1245678889999988 555777 467889999999987631 Q ss_pred ccccccceeeeeccceeEeeecccCCcchhhhhcCHHHHHHHHHHHHhcCCCccc Q lcl|NC_015456. 74 ESYSRRVTSFSLSGEFSQTFGEVTKNQSENMMLSTPWGKIFEQLKARRRGRFALM 128 (137) Q Consensus 74 ~~~~g~v~S~s~~G~vSvSy~~~~~~~~~~wl~~T~YGq~y~~L~r~~g~Gg~~~ 128 (137) ..+.|+|.|. |.||.+|.+.--...-+||+ || |+..=|+++| T Consensus 63 --~~~NissRsM-gtVSYTy~T~iP~~i~~~L~--PY--------Rrlrw~~~~~ 104 (104) T protein:vir:95 63 --TTGNISARTM-GTVSYTYVTDIPSSAYAYLM--PY--------RKLSWGKRYV 104 (104) T ss_pred --CCCCcccccc-cceeeechhhhhHHHHHhhh--hh--------hhhcccccCC Confidence 3457788896 99999996522111223332 22 3344467777 No 44 >protein:vir:94492 Length: 104 # NCBI annotation: ORF049 # Family: family:all:789 # ACLAME annotation(s): phi:0000067 - phage portal associated protein # MgeID: mge:1508 # MgeName: 88 # Cross-refs: genbank:acc:YP_240678;genbank:gi:66396380;genbank:GeneID:5133756 Probab=46.69 E-value=0.13 Score=25.36 Aligned_cols=97 Identities=11% Similarity=0.201 Sum_probs=57.2 Q ss_pred CCccccchHHHHHHHHh-hhccC-----CCHHHHHHHHHHHHHHhCCCCCc-hHHHHHHHHHHHHHHHHhcccccccccc Q lcl|NC_015456. 1 MNQENLIAVIEQMRKLV-PALRK-----VPDETLYAWVEMAELFVCQKTFK-DAYVKALALYALHLAFLDGALKGEDEDI 73 (137) Q Consensus 1 m~~~~~~~~i~~Fr~~~-PeF~~-----vpD~~i~~~l~~A~~~v~~~~~g-~~~~~a~~ll~AH~l~l~~~~~~~~~~~ 73 (137) |..+ +.+.+- -...| +=...|..+++.|+.+ |+..|+ +.+.-++..|+|-.+.-+ T Consensus 1 Md~~-------dVK~l~~~~~~d~~~D~~~~~li~~y~e~aedy-CN~~F~~~~lP~gVkkfvAe~iky~---------- 62 (104) T protein:vir:94 1 MDAK-------DVKMINGLSLNDSSNDEQIEYLIEEYKGVAEDY-CNQKFDDKEVPSGVKKFIAECIKFG---------- 62 (104) T ss_pred CCHH-------HHHHHhCCCCCCcccHHHHHHHHHHHHHHHHHH-hCCCCCCccCCccHHHHHHHHHhhC---------- Confidence 5433 233321 01111 1245678889999988 555777 467889999999987631 Q ss_pred ccccccceeeeeccceeEeeecccCCcchhhhhcCHHHHHHHHHHHHhcCCCccc Q lcl|NC_015456. 74 ESYSRRVTSFSLSGEFSQTFGEVTKNQSENMMLSTPWGKIFEQLKARRRGRFALM 128 (137) Q Consensus 74 ~~~~g~v~S~s~~G~vSvSy~~~~~~~~~~wl~~T~YGq~y~~L~r~~g~Gg~~~ 128 (137) ..+.|+|.|. |.||.+|.+.--...-+||+ | . |+..=++++| T Consensus 63 --~~~NissRsM-gtVSYTy~T~iP~~i~~~L~--P-------Y-Rrlrw~~~~~ 104 (104) T protein:vir:94 63 --TTGNISARTM-GTVSYTYVTDIPSSAYAYLL--P-------Y-RKLSWGKRYV 104 (104) T ss_pred --CCCCcccccc-cceeeechhhhhHHHHHhhh--h-------h-hhhcccccCC Confidence 3457788896 99999996522111223322 2 2 3334467777 No 45 >protein:vir:97430 Length: 104 # NCBI annotation: ORF051 # Family: family:all:789 # ACLAME annotation(s): phi:0000067 - phage portal associated protein # MgeID: mge:1676 # MgeName: 92 # Cross-refs: genbank:acc:YP_240751;genbank:gi:66396455;genbank:GeneID:5133786 Probab=46.69 E-value=0.13 Score=25.36 Aligned_cols=97 Identities=11% Similarity=0.201 Sum_probs=57.2 Q ss_pred CCccccchHHHHHHHHh-hhccC-----CCHHHHHHHHHHHHHHhCCCCCc-hHHHHHHHHHHHHHHHHhcccccccccc Q lcl|NC_015456. 1 MNQENLIAVIEQMRKLV-PALRK-----VPDETLYAWVEMAELFVCQKTFK-DAYVKALALYALHLAFLDGALKGEDEDI 73 (137) Q Consensus 1 m~~~~~~~~i~~Fr~~~-PeF~~-----vpD~~i~~~l~~A~~~v~~~~~g-~~~~~a~~ll~AH~l~l~~~~~~~~~~~ 73 (137) |..+ +.+.+- -...| +=...|..+++.|+.+ |+..|+ +.+.-++..|+|-.+.-+ T Consensus 1 Md~~-------dVK~l~~~~~~d~~~D~~~~~li~~y~e~aedy-CN~~F~~~~lP~gVkkfvAe~iky~---------- 62 (104) T protein:vir:97 1 MDAK-------DVKMINGLSLNDSSNDEQIEYLIEEYKGVAEDY-CNQKFDDKEVPSGVKKFIAECIKFG---------- 62 (104) T ss_pred CCHH-------HHHHHhCCCCCCcccHHHHHHHHHHHHHHHHHH-hCCCCCCccCCccHHHHHHHHHhhC---------- Confidence 5433 233321 01111 1245678889999988 555777 467889999999987631 Q ss_pred ccccccceeeeeccceeEeeecccCCcchhhhhcCHHHHHHHHHHHHhcCCCccc Q lcl|NC_015456. 74 ESYSRRVTSFSLSGEFSQTFGEVTKNQSENMMLSTPWGKIFEQLKARRRGRFALM 128 (137) Q Consensus 74 ~~~~g~v~S~s~~G~vSvSy~~~~~~~~~~wl~~T~YGq~y~~L~r~~g~Gg~~~ 128 (137) ..+.|+|.|. |.||.+|.+.--...-+||+ | . |+..=++++| T Consensus 63 --~~~NissRsM-gtVSYTy~T~iP~~i~~~L~--P-------Y-Rrlrw~~~~~ 104 (104) T protein:vir:97 63 --TTGNISARTM-GTVSYTYVTDIPSSAYAYLL--P-------Y-RKLSWGKRYV 104 (104) T ss_pred --CCCCcccccc-cceeeechhhhhHHHHHhhh--h-------h-hhhcccccCC Confidence 3457788896 99999996522111223322 2 2 3334467777 No 46 >protein:vir:1241 Length: 104 # NCBI annotation: similar to phage Spp1 gp15 (product required for head morphogenesis) # Family: family:all:789 # ACLAME annotation(s): phi:0000067 - phage portal associated protein # MgeID: mge:25 # MgeName: phi ETA # Cross-refs: genbank:acc:NP_510940;genbank:gi:17426274;genbank:GeneID:927373 Probab=46.66 E-value=0.13 Score=25.36 Aligned_cols=97 Identities=11% Similarity=0.213 Sum_probs=57.2 Q ss_pred CCccccchHHHHHHHHh-hhccCC-C----HHHHHHHHHHHHHHhCCCCCc-hHHHHHHHHHHHHHHHHhcccccccccc Q lcl|NC_015456. 1 MNQENLIAVIEQMRKLV-PALRKV-P----DETLYAWVEMAELFVCQKTFK-DAYVKALALYALHLAFLDGALKGEDEDI 73 (137) Q Consensus 1 m~~~~~~~~i~~Fr~~~-PeF~~v-p----D~~i~~~l~~A~~~v~~~~~g-~~~~~a~~ll~AH~l~l~~~~~~~~~~~ 73 (137) |..+ +.+.+- -...|+ . ...|..+++.|+.+ |+..|+ +.+.-++..|+|-.+.-+ T Consensus 1 Md~~-------dVK~l~~~~~~d~~~D~~~~~li~~y~e~aedy-CN~~F~~~~lP~gVkkfvAe~iky~---------- 62 (104) T protein:vir:12 1 MDAK-------DVKMINGLSLNDSSDDEQIEYLIEEYKSVAEDY-CNQKFDDKEVPSGVKKFIAECIKFG---------- 62 (104) T ss_pred CCHH-------HHHHHhCCCCCCCccHHHHHHHHHHHHHHHHHH-hCCCCCCccCCccHHHHHHHHHhhC---------- Confidence 5433 233321 011111 2 44678889999988 555777 467889999999987631 Q ss_pred ccccccceeeeeccceeEeeecccCCcchhhhhcCHHHHHHHHHHHHhcCCCccc Q lcl|NC_015456. 74 ESYSRRVTSFSLSGEFSQTFGEVTKNQSENMMLSTPWGKIFEQLKARRRGRFALM 128 (137) Q Consensus 74 ~~~~g~v~S~s~~G~vSvSy~~~~~~~~~~wl~~T~YGq~y~~L~r~~g~Gg~~~ 128 (137) ..+.|+|.|. |.||.+|.+.--...-+||+ | . |+..=|+++| T Consensus 63 --~~~NissRsM-gtVSYTy~T~iP~~i~~~L~--P-------Y-Rrlrw~~~~~ 104 (104) T protein:vir:12 63 --TTGNISARTM-GTVSYTYVTDIPSSAYAYLL--P-------Y-RKLSWGKRYV 104 (104) T ss_pred --CCCCcccccc-cceeeechhhhhHHHHHhhh--h-------h-hhhcccccCC Confidence 3457788896 99999996522111223322 2 2 3334467777 No 47 >protein:vir:1026 Length: 107 # NCBI annotation: Orf46 # Family: family:all:734 # ACLAME annotation(s): phi:0000018 - phage genome packaging # MgeID: mge:20 # MgeName: bIL286 # Cross-refs: genbank:acc:NP_076680;genbank:gi:13095789;genbank:GeneID:920344 Probab=42.15 E-value=0.69 Score=21.46 Aligned_cols=91 Identities=13% Similarity=0.203 Sum_probs=47.4 Q ss_pred CCccccchHHHHHHHHhhhccCCCHHHHHHHHHHHHHHhCC-------C-CC------chHHHHHHHHHHHHHHHHhccc Q lcl|NC_015456. 1 MNQENLIAVIEQMRKLVPALRKVPDETLYAWVEMAELFVCQ-------K-TF------KDAYVKALALYALHLAFLDGAL 66 (137) Q Consensus 1 m~~~~~~~~i~~Fr~~~PeF~~vpD~~i~~~l~~A~~~v~~-------~-~~------g~~~~~a~~ll~AH~l~l~~~~ 66 (137) |+.+ +++||...--=.+ +|+.|+.+|.-|..+|-. . .| -.+++.|+.+|++||-.-..+. T Consensus 1 M~vt-----ld~iK~sLriD~d-Dd~~l~~~l~aA~~YIk~Aig~d~~~~~Fy~~e~~~~lfd~Avl~La~~~Y~nR~at 74 (107) T protein:vir:10 1 MSVT-----VDDLLDQLSEDDD-RKPQLQIYFDTATAYVKNAVSSDTVDAPFFNVENVSPIYDVAVLSYSMDLWINRSTT 74 (107) T ss_pred Ceec-----HHHHHHHhcCCCC-chHHHHHHHHHHHHHHhhhcCcccccCCccccccchhHHHHHHHHHHHHHhhcccce Confidence 6664 8888875422234 799999999999999921 1 12 1468889999999997543211 Q ss_pred cccccccccccccceeeeeccceeEeeeccc--CCcchhhhhcCH Q lcl|NC_015456. 67 KGEDEDIESYSRRVTSFSLSGEFSQTFGEVT--KNQSENMMLSTP 109 (137) Q Consensus 67 ~~~~~~~~~~~g~v~S~s~~G~vSvSy~~~~--~~~~~~wl~~T~ 109 (137) .. . ..+..++-+.+.-.|.... .+.. =.+|. T Consensus 75 --~~----v---p~~v~siI~QLRg~y~~~~e~~~~~---~~~~~ 107 (107) T protein:vir:10 75 --MP----P---TTAVDHMVGQLRGLYSSWKEAQDGQ---NLQTE 107 (107) T ss_pred --ee----c---chHHHHHHHHHhhhhcccccccCCC---cccCC Confidence 00 0 1111112233333332211 1100 01222 No 48 >protein:vir:1640 Length: 132 # NCBI annotation: hypothetical protein # Family: family:all:1271 # MgeID: mge:33 # MgeName: r1t # Cross-refs: genbank:acc:NP_695061;genbank:gi:23455752;genbank:GeneID:955488 Probab=40.66 E-value=0.64 Score=21.65 Aligned_cols=112 Identities=11% Similarity=0.042 Sum_probs=48.8 Q ss_pred CCccccchHHHHHHHHhhhccCCCHHHHHHHHHHHHHHhCCC--CC---------------chHHHHHHHHHHHHHHHHh Q lcl|NC_015456. 1 MNQENLIAVIEQMRKLVPALRKVPDETLYAWVEMAELFVCQK--TF---------------KDAYVKALALYALHLAFLD 63 (137) Q Consensus 1 m~~~~~~~~i~~Fr~~~PeF~~vpD~~i~~~l~~A~~~v~~~--~~---------------g~~~~~a~~ll~AH~l~l~ 63 (137) |+ ...+++++.+++-++.+=..+.++.+|++|..+|-.. .+ .....+....+++--|... T Consensus 1 m~---~fAtv~Dv~~r~r~L~~~E~~ra~~lL~dAs~~ir~~~p~~~~~l~a~~~e~~~~~~~~~~~V~~~~V~Ral~~~ 77 (132) T protein:vir:16 1 MN---PFATVDDLTMLWRPLKGDEKERAEKLLEIVSDSLREEADKVGRDLYAMIAEKPSYFASVVKSVTVDIVARTLMTS 77 (132) T ss_pred CC---ccCCHHHHHHHhcCCCHhHHHHHHHHHHHHHHHHHHhhhhhccccccccccccccchhHHHHHHHHHHHHHhcCC Confidence 54 4457888888886554434468999999999998210 01 1112223333333333211 Q ss_pred ccccccccccccccccc-eeeeeccce--eEeeecccCCcchhhhhcCHHHHHHHHHHHHhcCCCccccCCccc Q lcl|NC_015456. 64 GALKGEDEDIESYSRRV-TSFSLSGEF--SQTFGEVTKNQSENMMLSTPWGKIFEQLKARRRGRFALMTGLRGG 134 (137) Q Consensus 64 ~~~~~~~~~~~~~~g~v-~S~s~~G~v--SvSy~~~~~~~~~~wl~~T~YGq~y~~L~r~~g~Gg~~~~g~~~~ 134 (137) . +..|.. .|.+ .|.. |.+|.++..+ +-.|. .=|.++...+-+.+.|.=-++- T Consensus 78 -----~-----~~~G~tq~S~T-aG~ys~S~t~~~p~G~-----lylt~---~e~~~LG~~~~r~~~i~~~~~~ 132 (132) T protein:vir:16 78 -----T-----DQEPMTQTTES-ALGYSVSGSYLVPGGG-----LFIKN---SELSRLGLKKQRFGVIDFYGND 132 (132) T ss_pred -----C-----CCCCceeeeee-ccchheeeeeecCCCc-----ceeCh---HHHHhhCCCCCceEEEeecCCC Confidence 0 011211 3445 5866 5556655321 11121 1122222222222222211111 No 49 >protein:vir:4998 Length: 106 # NCBI annotation: putative DNA packaging protein # Family: family:all:734 # ACLAME annotation(s): phi:0000018 - phage genome packaging # MgeID: mge:109 # MgeName: Sfi21 # Cross-refs: genbank:acc:NP_049972;genbank:gi:9632944;genbank:GeneID:1262107 Probab=39.44 E-value=1 Score=20.54 Aligned_cols=92 Identities=13% Similarity=0.117 Sum_probs=46.7 Q ss_pred CCccccchHHHHHHHHhh-hccCCCHHHHHHHHHHHHHHhCCC-----CC------chHHHHHHHHHHHHHHHHhccccc Q lcl|NC_015456. 1 MNQENLIAVIEQMRKLVP-ALRKVPDETLYAWVEMAELFVCQK-----TF------KDAYVKALALYALHLAFLDGALKG 68 (137) Q Consensus 1 m~~~~~~~~i~~Fr~~~P-eF~~vpD~~i~~~l~~A~~~v~~~-----~~------g~~~~~a~~ll~AH~l~l~~~~~~ 68 (137) |... ++.+|.--= .| |-.|+.|+.+|+-|..+|.+. .| ...++.|+.+|++|+-.-...... T Consensus 1 M~v~-----Le~iK~~LRID~-ddDD~li~~~i~AA~~yi~~aig~~~~~~~~~~~~~~~~~Avl~Lv~~~YeNR~~~~~ 74 (106) T protein:vir:49 1 MSVS-----KEIIMQTLNLDE-TDDTALIPAYIESAQQYIINAVGSDPKFYELENVKYLFDTAVIALTSTYFTYRVALNE 74 (106) T ss_pred Cccc-----HHHHHHHcCCCC-ccchHHHHHHHHHHHHHHHhhcCCCCCCCCcCCCchHHHHHHHHHHHHHHhhcccccC Confidence 5553 777776322 23 358999999999999998421 22 235788999999999875432211 Q ss_pred cccccccccccceeeeeccceeEeeecc--cCCcchh Q lcl|NC_015456. 69 EDEDIESYSRRVTSFSLSGEFSQTFGEV--TKNQSEN 103 (137) Q Consensus 69 ~~~~~~~~~g~v~S~s~~G~vSvSy~~~--~~~~~~~ 103 (137) . .....+-.|.| +-.+..-.|..- ..+.+ + T Consensus 75 ~--~~~~vp~~v~s--lI~qLR~~y~~~~e~~~~~-~ 106 (106) T protein:vir:49 75 T--LTYPINLTLNS--IIGQLRGLYATYSDGGVNN-A 106 (106) T ss_pred c--ccccccHHHHH--HHHHHHhhhhhhhhccccC-C Confidence 1 00000001111 112222233221 11111 1 No 50 >protein:vir:4788 Length: 130 # NCBI annotation: hypothetical protein # Family: family:all:1399 # MgeID: mge:104 # MgeName: MM1 # Cross-refs: genbank:acc:NP_150168;swissprot:trembl:q94m43;genbank:gi:15088779;uniprot:Q94M43;genbank:GeneID:955972 Probab=38.52 E-value=0.96 Score=20.67 Aligned_cols=113 Identities=13% Similarity=0.088 Sum_probs=58.6 Q ss_pred CCccccchHHHHHHHHhhhccCCCHHHHHHHHHHHHHHhCCCC---C--c-------hHH----HHHHHHHHHHHHHHhc Q lcl|NC_015456. 1 MNQENLIAVIEQMRKLVPALRKVPDETLYAWVEMAELFVCQKT---F--K-------DAY----VKALALYALHLAFLDG 64 (137) Q Consensus 1 m~~~~~~~~i~~Fr~~~PeF~~vpD~~i~~~l~~A~~~v~~~~---~--g-------~~~----~~a~~ll~AH~l~l~~ 64 (137) |+=- +.+.|++.-++ +++.++..+..|+..||.-. + + +.+ ++|+++ ..+++...| T Consensus 1 M~Yl----T~eey~el~~~----~~~~F~kl~k~A~~~ID~~t~~~y~~~~~~~~~~~~r~~~vK~A~a~-QieY~~~~G 71 (130) T protein:vir:47 1 MTYL----TQEEFDELDFD----EVTDFEKLAKRAKIAIDLYTNGIYQKDIDFEKEIAYRKSAVKLAMAF-QIAYLDASG 71 (130) T ss_pred CCCC----chhhHhhcCCC----ChhhHHHHHHHHHHHHHHHhcccccccCCccCcchHHHHHHHHHHHH-HHHHHHHhc Confidence 5543 67778765333 34448899999998886321 1 1 122 233332 234444334 Q ss_pred cccccccccccccccceeeeeccceeEeeecccCCcchhhhhcCHHHHHHHHHHHHhcCCCccccCC-ccc Q lcl|NC_015456. 65 ALKGEDEDIESYSRRVTSFSLSGEFSQTFGEVTKNQSENMMLSTPWGKIFEQLKARRRGRFALMTGL-RGG 134 (137) Q Consensus 65 ~~~~~~~~~~~~~g~v~S~s~~G~vSvSy~~~~~~~~~~wl~~T~YGq~y~~L~r~~g~Gg~~~~g~-~~~ 134 (137) ..... ..+-++|.++ |..|||+...++.....-+ ....+-+.++...|. ++..|. =-| T Consensus 72 ~~s~~------~~~~~~S~sv-GrtSis~~~~~~~~~~~~~---~vs~da~~~L~~tGL--~Ly~GV~yd~ 130 (130) T protein:vir:47 72 IMSAD------DKQLANSVSI-GRTSISYSTSQSTLAGQRF---NLSMDAENALRQAGF--SLVVGVAYDR 130 (130) T ss_pred cccch------hccCcceeee-cceeeecCcCccccccCCc---cccHHHHHHHHhccc--ccccCCCccC Confidence 33221 1445689995 9999999875443221111 245555566666554 233333 111 No 51 >protein:vir:94761 Length: 132 # NCBI annotation: unknown # Family: family:all:1271 # MgeID: mge:1529 # MgeName: phi LC3 # Cross-refs: genbank:acc:NP_996708;genbank:gi:45597423;genbank:GeneID:2769029 Probab=38.16 E-value=0.93 Score=20.75 Aligned_cols=109 Identities=10% Similarity=-0.017 Sum_probs=52.3 Q ss_pred CCccccchHHHHHHHHhhhccCCCHHHHHHHHHHHHHHhCC-------------CCCchHHH----HHHHHHHHHHHHHh Q lcl|NC_015456. 1 MNQENLIAVIEQMRKLVPALRKVPDETLYAWVEMAELFVCQ-------------KTFKDAYV----KALALYALHLAFLD 63 (137) Q Consensus 1 m~~~~~~~~i~~Fr~~~PeF~~vpD~~i~~~l~~A~~~v~~-------------~~~g~~~~----~a~~ll~AH~l~l~ 63 (137) |+ ...+++++.+++.++.+=..++++..|++|..+|-. ..+++..+ +...-+|+--|.- T Consensus 1 m~---~fAtv~Dl~~r~r~L~~dE~~ra~~LL~dAs~~iR~~~~~~~~~~~~~~~~~~d~~~~~~k~V~~~~V~Ral~~- 76 (132) T protein:vir:94 1 MN---PFATVDDLTMLWRPLKGDEKERAEKLLEIVSDTLREEADKVGRDLDVMISEKPSYFSSVVKSVTVDIVARTLMT- 76 (132) T ss_pred CC---CcCCHHHHHHHhccCChhHHHHHHHHHHHHHHHHHHHHhhhccccccccCCCCccchhHHHHHHHHHHHHHhcC- Confidence 54 455788999999877666668999999999999831 11233323 2223333332211 Q ss_pred ccccccccccccccccc-eeeeeccce--eEeeecccCCcchhhhhcCHHHHHHHHHHHHhcCC-Ccccc--CCccc Q lcl|NC_015456. 64 GALKGEDEDIESYSRRV-TSFSLSGEF--SQTFGEVTKNQSENMMLSTPWGKIFEQLKARRRGR-FALMT--GLRGG 134 (137) Q Consensus 64 ~~~~~~~~~~~~~~g~v-~S~s~~G~v--SvSy~~~~~~~~~~wl~~T~YGq~y~~L~r~~g~G-g~~~~--g~~~~ 134 (137) + .+ ..|.- .|.+ .|.. |.+|.+|..+ +-.|.- .+++.|.+ .++.+ =-++- T Consensus 77 ~-~~--------~~g~tq~S~T-aG~ys~S~T~~np~G~-----lylt~~------e~~~LGl~~~r~~~i~~~~~~ 132 (132) T protein:vir:94 77 S-TD--------QEPMTQTTES-ALGYSVSGSYLVPGGG-----LFIKNS------ELSRLGLKKQRFGVIDFYGND 132 (132) T ss_pred C-CC--------CCCceeeeee-cccceeeeeeecCCCC-----ceeChH------HHHhhCCCCCceEEEeecCCC Confidence 0 01 11211 2444 5755 5557655332 222221 33334432 22211 00111 No 52 >protein:vir:102158 Length: 99 # NCBI annotation: uncharacterized phage protein (possible DNA packaging) # Family: family:all:316 # MgeID: mge:1641 # MgeName: phiSM101 # Cross-refs: genbank:acc:YP_699940;genbank:gi:110804046;genbank:GeneID:4206702 Probab=37.41 E-value=0.66 Score=21.57 Aligned_cols=93 Identities=8% Similarity=-0.051 Sum_probs=45.1 Q ss_pred cchHHHHHHHHhhhccCCCHHHHHHHHHHHHHHhCC------CCCchHHHHHHHHHHHHHHHHhcccccccccccccccc Q lcl|NC_015456. 6 LIAVIEQMRKLVPALRKVPDETLYAWVEMAELFVCQ------KTFKDAYVKALALYALHLAFLDGALKGEDEDIESYSRR 79 (137) Q Consensus 6 ~~~~i~~Fr~~~PeF~~vpD~~i~~~l~~A~~~v~~------~~~g~~~~~a~~ll~AH~l~l~~~~~~~~~~~~~~~g~ 79 (137) ++=+++++|.--===.|..|+.|+.+++-|..++.. .......+.|+.++++|+-.-........ . T Consensus 1 M~vtLee~K~~LRID~d~dD~lI~~~i~aA~~~i~~~~~~~~~~~~~~~k~Avl~lv~~~YenR~~~~~~~--------~ 72 (99) T protein:vir:10 1 MILSVDEVKNYLRVDYDEDDILIQDLIESAEDYLYNATGKKFTEKNKLAKRYCLALVYDWYKDKGMNIRAT--------K 72 (99) T ss_pred CcCCHHHHHHHcCCCCCcchHHHHHHHHHHHHHHHHhhCCCCCCCChHHHHHHHHHHHHhHhcchhhhhhh--------h Confidence 445588888732211246899999999999998832 12246678899999999986532211100 0 Q ss_pred ceeeeeccceeEeeecccCCcchhhhhcCHHHHHHHHHHHHhcCCCcccc Q lcl|NC_015456. 80 VTSFSLSGEFSQTFGEVTKNQSENMMLSTPWGKIFEQLKARRRGRFALMT 129 (137) Q Consensus 80 v~S~s~~G~vSvSy~~~~~~~~~~wl~~T~YGq~y~~L~r~~g~Gg~~~~ 129 (137) + +.. . ...|||..- |+-.+...+..=+ T Consensus 73 ~-~~~---~-----------------~~lp~~v~s--li~qlr~~~~~~~ 99 (99) T protein:vir:10 73 N-TTV---S-----------------EKVKYTLQS--ILLQLKFCKEEDT 99 (99) T ss_pred c-cch---h-----------------hhhhHHHHH--HHHHHhhccCCCC Confidence 0 000 0 011111110 0000000000110 No 53 >protein:vir:3615 Length: 110 # NCBI annotation: ORF38 # Family: family:all:372 # MgeID: mge:74 # MgeName: TP901-1 # Cross-refs: genbank:acc:NP_112701;genbank:gi:13786569;genbank:GeneID:921067 Probab=36.85 E-value=1.1 Score=20.25 Aligned_cols=101 Identities=16% Similarity=0.145 Sum_probs=55.9 Q ss_pred chHHHHHHHHhhhccCCCHHHHHHHHHHHHHHhCC------CCCchHHHHHH-HHHHHHHHHHhcccccccccccccccc Q lcl|NC_015456. 7 IAVIEQMRKLVPALRKVPDETLYAWVEMAELFVCQ------KTFKDAYVKAL-ALYALHLAFLDGALKGEDEDIESYSRR 79 (137) Q Consensus 7 ~~~i~~Fr~~~PeF~~vpD~~i~~~l~~A~~~v~~------~~~g~~~~~a~-~ll~AH~l~l~~~~~~~~~~~~~~~g~ 79 (137) +++++++|.+-+. -.|+.|+.+|+.|...|.. ....+.++..+ .+-++++= +...+ + T Consensus 1 M~~L~~vK~~lg~---~~D~lL~~li~~a~~~i~~~~~~~~~eiP~~l~~iv~evav~ryN----R~g~E---------G 64 (110) T protein:vir:36 1 MAITDDLKMLLGG---SLDERLEVIEKRTRDRLLLILGSDIKEVPPELEYVVLDVSLKRFN----RIGQE---------G 64 (110) T ss_pred ChhHHHHHhhcCC---ChhHHHHHHHHHHHHHHHHHhCCChhhhhhHHHHHHHHHHHHHhc----ccccc---------c Confidence 8899999998664 4799999999999987732 12334444332 23333332 22222 2 Q ss_pred ceeeeeccceeEeeecccCCcchhhhhcCHHHHHHHHHHHHhcCCCccccCCcccccC Q lcl|NC_015456. 80 VTSFSLSGEFSQTFGEVTKNQSENMMLSTPWGKIFEQLKARRRGRFALMTGLRGGCHQ 137 (137) Q Consensus 80 v~S~s~~G~vSvSy~~~~~~~~~~wl~~T~YGq~y~~L~r~~g~Gg~~~~g~~~~c~~ 137 (137) .+|.| ++-+|+||... -..+|-..+-+.++.-.... +-..|--| T Consensus 65 ~~S~S-eeG~S~sf~~~---------d~~~y~~~l~~y~~~~~~~~----~~~~g~~~ 108 (110) T protein:vir:36 65 MQSYS-QEGLSMTFSES---------DFDEYADEIESWRKSRETEG----DKKIGRFR 108 (110) T ss_pred cceee-cCCceeeeccc---------CcchHHHHHHHHHhhhcccc----CCcceeee Confidence 36888 56779999632 12345555555555433211 11111122 No 54 >protein:vir:100103 Length: 120 # NCBI annotation: gp7 # Family: family:all:363 # MgeID: mge:1639 # MgeName: phi1026b # Cross-refs: genbank:acc:NP_945037;genbank:gi:38707897;genbank:GeneID:2744150 Probab=36.44 E-value=1.2 Score=20.20 Aligned_cols=94 Identities=19% Similarity=0.138 Sum_probs=52.2 Q ss_pred CCccccchHHHHHHHHhhhccCCCHHHHHHHHHHHHHHhCC----CC----------------------CchHHHHHHHH Q lcl|NC_015456. 1 MNQENLIAVIEQMRKLVPALRKVPDETLYAWVEMAELFVCQ----KT----------------------FKDAYVKALAL 54 (137) Q Consensus 1 m~~~~~~~~i~~Fr~~~PeF~~vpD~~i~~~l~~A~~~v~~----~~----------------------~g~~~~~a~~l 54 (137) |+-+-.+-+++.+|.--=-=.|.+|+.|+.+|+-|..++.. +. .....+.|+.| T Consensus 1 ~~~~m~~vtL~e~K~hLRvd~d~DD~lI~~~i~AA~~~v~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~AvLl 80 (120) T protein:vir:10 1 MADQTPIVSLEVALAHLREDAGVADDLIKIYIGAATQSASDYVDRKLYANDAEMQAAVADATAGADPIVANDAIRAAILL 80 (120) T ss_pred CCCCCCccCHHHHHHHcCCCCCcchHHHHHHHHHHHHHHHHHhCCcccccccccchhhhccccccccccCCHHHHHHHHH Confidence 87777766789888843222357899999999999988732 11 12445789999 Q ss_pred HHHHHHHHhccccccccccccccccceeeeeccceeEeeecccCCcchhhhhcCHHHHHHHHHHHHhcCCCcc Q lcl|NC_015456. 55 YALHLAFLDGALKGEDEDIESYSRRVTSFSLSGEFSQTFGEVTKNQSENMMLSTPWGKIFEQLKARRRGRFAL 127 (137) Q Consensus 55 l~AH~l~l~~~~~~~~~~~~~~~g~v~S~s~~G~vSvSy~~~~~~~~~~wl~~T~YGq~y~~L~r~~g~Gg~~ 127 (137) +++|+-....... +|... -...-|+|.+ .|+..+..++++ T Consensus 81 lvg~~YenRe~~~------------------~~~~~-------------~~~~lP~~v~--~Ll~~yR~~~gv 120 (120) T protein:vir:10 81 TIGKLYAFREDVV------------------SGASA-------------SVTELPSGAK--SLLFPYRVGLGV 120 (120) T ss_pred HHHHHHhchhhhh------------------hcccc-------------cccccCHHHH--HHHHHhhhccCC Confidence 9999886431100 01000 0122344432 233333333333 No 55 >protein:vir:4954 Length: 104 # NCBI annotation: putative DNA packaging protein # Family: family:all:734 # ACLAME annotation(s): phi:0000018 - phage genome packaging # MgeID: mge:108 # MgeName: Sfi19 # Cross-refs: genbank:acc:NP_049930;genbank:gi:9632901;genbank:GeneID:1262077 Probab=36.11 E-value=0.54 Score=22.04 Aligned_cols=92 Identities=11% Similarity=0.166 Sum_probs=46.6 Q ss_pred CCccccchHHHHHHHHhh-hccCCCHHHHHHHHHHHHHHhCCC-----CC------chHHHHHHHHHHHHHHHHhccccc Q lcl|NC_015456. 1 MNQENLIAVIEQMRKLVP-ALRKVPDETLYAWVEMAELFVCQK-----TF------KDAYVKALALYALHLAFLDGALKG 68 (137) Q Consensus 1 m~~~~~~~~i~~Fr~~~P-eF~~vpD~~i~~~l~~A~~~v~~~-----~~------g~~~~~a~~ll~AH~l~l~~~~~~ 68 (137) |.. +++.+|.--= .| +..|+.|+.+|+-|..+|.+. .+ ...++.|+.++++|+-.-...... T Consensus 1 M~v-----tLeeiK~~LRID~-dddD~li~~~i~aA~~yi~~aig~~~~~~~~~~~~~~~~~Avl~Lv~~~YeNR~~~~~ 74 (104) T protein:vir:49 1 MSV-----SKTSIMQTLNLDE-TDDTALIPAYIESAKQYIINAVGSDSKFYDLDSVRALFDTAVIALTSSYFTYRVALTD 74 (104) T ss_pred Ccc-----cHHHHHHHcCCCC-ccchHHHHHHHHHHHHHHHHhhCCCCccccccCCChHHHHHHHHHHHHHHhhchhccc Confidence 544 4777776321 33 358999999999999988421 12 246788999999999875432111 Q ss_pred cccccccccccceeeeeccceeEeeecccCCcch Q lcl|NC_015456. 69 EDEDIESYSRRVTSFSLSGEFSQTFGEVTKNQSE 102 (137) Q Consensus 69 ~~~~~~~~~g~v~S~s~~G~vSvSy~~~~~~~~~ 102 (137) . .....+-.|. ++-....-.|..-.-..++ T Consensus 75 ~--~~~~vp~~v~--sli~qLr~~y~~~~e~~~~ 104 (104) T protein:vir:49 75 T--ATYPVNLTLN--SIIGQLRGLYATYSEERGD 104 (104) T ss_pred c--ccchhhHHHH--HHHHHHHHhhhhhhhccCC Confidence 0 0000010110 1112222233322111111 No 56 >protein:vir:1887 Length: 108 # NCBI annotation: gp6 # Family: family:all:6764 # MgeID: mge:41 # MgeName: HK022 # Cross-refs: genbank:acc:NP_037667;genbank:gi:9634125;genbank:GeneID:1262472 Probab=35.07 E-value=1.3 Score=20.05 Aligned_cols=95 Identities=12% Similarity=0.060 Sum_probs=45.4 Q ss_pred CCccccchHHHHHHHHhhhccCCCHHHHHHHHHHHHHHh----CCC------CCchHHHHHHHHHHHHHHHHhccccccc Q lcl|NC_015456. 1 MNQENLIAVIEQMRKLVPALRKVPDETLYAWVEMAELFV----CQK------TFKDAYVKALALYALHLAFLDGALKGED 70 (137) Q Consensus 1 m~~~~~~~~i~~Fr~~~PeF~~vpD~~i~~~l~~A~~~v----~~~------~~g~~~~~a~~ll~AH~l~l~~~~~~~~ 70 (137) |..-.+++ ++.+|.--=-=.+..|+.|+.+|+-|..++ +.. ........|+.|+++|+-.-.-.... T Consensus 3 ~~~M~~vt-Lee~K~hLRid~dddD~lI~~~i~AA~~~v~~~~~~~~~~~~~~~p~~ik~AiLllv~~~YenRE~~~~-- 79 (108) T protein:vir:18 3 IDVLDVIS-LSLFKQQIEFEEDDRDELITLYAQAAFDYCMRWCDEPAWKVAADIPAAVKGAVLLVFADMFEHRTAQSE-- 79 (108) T ss_pred CCcccccC-HHHHHHHcCCCCCcchHHHHHHHHHHHHHHHHHhCCcccccccccchHHHHHHHHHHHHHHhccccccc-- Confidence 55555555 788887432223578999999999998776 222 12345568999999999864321100 Q ss_pred cccccccccceeeeeccceeEeeec-ccCCcchhhhhcC Q lcl|NC_015456. 71 EDIESYSRRVTSFSLSGEFSQTFGE-VTKNQSENMMLST 108 (137) Q Consensus 71 ~~~~~~~g~v~S~s~~G~vSvSy~~-~~~~~~~~wl~~T 108 (137) .....+. .++ ..=--|.. +++..++.. + T Consensus 80 ~~~~~~~------~~~-~LL~pYR~~~g~~~~~~~---~ 108 (108) T protein:vir:18 80 VQLYENA------AAE-RMMFIHRNWRGKAESEEG---S 108 (108) T ss_pred chhhhhH------HHH-HHHHHHHhcCCCCCcccC---C Confidence 0000000 000 00000111 222111100 0 No 57 >protein:vir:192 Length: 108 # NCBI annotation: Gp6 # Family: family:all:6764 # MgeID: mge:6 # MgeName: HK97 # Cross-refs: genbank:acc:NP_037702;genbank:gi:9634167;genbank:GeneID:1262532 Probab=35.07 E-value=1.3 Score=20.05 Aligned_cols=95 Identities=12% Similarity=0.060 Sum_probs=45.4 Q ss_pred CCccccchHHHHHHHHhhhccCCCHHHHHHHHHHHHHHh----CCC------CCchHHHHHHHHHHHHHHHHhccccccc Q lcl|NC_015456. 1 MNQENLIAVIEQMRKLVPALRKVPDETLYAWVEMAELFV----CQK------TFKDAYVKALALYALHLAFLDGALKGED 70 (137) Q Consensus 1 m~~~~~~~~i~~Fr~~~PeF~~vpD~~i~~~l~~A~~~v----~~~------~~g~~~~~a~~ll~AH~l~l~~~~~~~~ 70 (137) |..-.+++ ++.+|.--=-=.+..|+.|+.+|+-|..++ +.. ........|+.|+++|+-.-.-.... T Consensus 3 ~~~M~~vt-Lee~K~hLRid~dddD~lI~~~i~AA~~~v~~~~~~~~~~~~~~~p~~ik~AiLllv~~~YenRE~~~~-- 79 (108) T protein:vir:19 3 IDVLDVIS-LSLFKQQIEFEEDDRDELITLYAQAAFDYCMRWCDEPAWKVAADIPAAVKGAVLLVFADMFEHRTAQSE-- 79 (108) T ss_pred CCcccccC-HHHHHHHcCCCCCcchHHHHHHHHHHHHHHHHHhCCcccccccccchHHHHHHHHHHHHHHhccccccc-- Confidence 55555555 788887432223578999999999998776 222 12345568999999999864321100 Q ss_pred cccccccccceeeeeccceeEeeec-ccCCcchhhhhcC Q lcl|NC_015456. 71 EDIESYSRRVTSFSLSGEFSQTFGE-VTKNQSENMMLST 108 (137) Q Consensus 71 ~~~~~~~g~v~S~s~~G~vSvSy~~-~~~~~~~~wl~~T 108 (137) .....+. .++ ..=--|.. +++..++.. + T Consensus 80 ~~~~~~~------~~~-~LL~pYR~~~g~~~~~~~---~ 108 (108) T protein:vir:19 80 VQLYENA------AAE-RMMFIHRNWRGKAESEEG---S 108 (108) T ss_pred chhhhhH------HHH-HHHHHHHhcCCCCCcccC---C Confidence 0000000 000 00000111 222111100 0 No 58 >protein:vir:9877 Length: 114 # NCBI annotation: hypothetical protein # Family: family:all:2716 # MgeID: mge:177 # MgeName: 315.5 # Cross-refs: genbank:acc:NP_795639;genbank:gi:28876402;genbank:GeneID:1257933 Probab=34.86 E-value=1.3 Score=20.02 Aligned_cols=104 Identities=14% Similarity=0.177 Sum_probs=62.1 Q ss_pred CCccccchHHHHHHHHhhhccCCCHHHHHHHHHHHHHHhC----CCCCchHHHH-HHHHHHHHHHHHhcccccccccccc Q lcl|NC_015456. 1 MNQENLIAVIEQMRKLVPALRKVPDETLYAWVEMAELFVC----QKTFKDAYVK-ALALYALHLAFLDGALKGEDEDIES 75 (137) Q Consensus 1 m~~~~~~~~i~~Fr~~~PeF~~vpD~~i~~~l~~A~~~v~----~~~~g~~~~~-a~~ll~AH~l~l~~~~~~~~~~~~~ 75 (137) |.+.+ -+++++.|.+-+-=.+-.|+.|+.+|+.|...+. .....+.++. ....-++|+=.+ .. T Consensus 1 m~~~~-~~~L~~vK~~Lgi~d~~~D~lL~~ii~~~~~~i~~~l~~~~iP~~L~~Iv~ev~vkryNR~----g~------- 68 (114) T protein:vir:98 1 MDETK-QAIIDRVRVRLADETSLKEELLEELTQTAIDRINLKVGDVVFNPLFNSIAVDVVVKMYRRM----YF------- 68 (114) T ss_pred CchhH-HHHHHHHHHHhCCCCCchhhHHHHHHHHHHHHHHHhhCccccchHHHHHHHHHHHHHhccc----Cc------- Confidence 99887 5579999998877556789999999999998774 3344444443 333444454322 11 Q ss_pred ccccceeeeeccceeEeeecccCCcchhhhhcCHHHHHHHHHHHHhc---CC--Cccc Q lcl|NC_015456. 76 YSRRVTSFSLSGEFSQTFGEVTKNQSENMMLSTPWGKIFEQLKARRR---GR--FALM 128 (137) Q Consensus 76 ~~g~v~S~s~~G~vSvSy~~~~~~~~~~wl~~T~YGq~y~~L~r~~g---~G--g~~~ 128 (137) -+++|.|. +-+|+||... -..+|--.+-++++... -| .++. T Consensus 69 --EG~~S~S~-eG~S~tf~dn---------df~ey~~~l~~y~~~~~~~~~g~~v~Fl 114 (114) T protein:vir:98 69 --EGIDTEKA-DTISTKFIEN---------VLAEYGEELASYKKDRLAILNKKVVRFL 114 (114) T ss_pred --cccceeec-cceeeeeecc---------ccchhHHHHHHHHhhhhhhhcCceeecC Confidence 23468884 6679999632 12345555444444221 11 2223 No 59 >protein:vir:81069 Length: 115 # NCBI annotation: p10 # Family: family:all:363 # MgeID: mge:1889 # MgeName: Xop411 # Cross-refs: genbank:acc:YP_001285680;genbank:gi:148727188;genbank:GeneID:5247114 Probab=34.59 E-value=1.3 Score=19.99 Aligned_cols=84 Identities=8% Similarity=-0.093 Sum_probs=47.7 Q ss_pred cchHHHHHHHHh---hhccCCCHHHHHHHHHHHHHHh----CCCC----------------------CchHHHHHHHHHH Q lcl|NC_015456. 6 LIAVIEQMRKLV---PALRKVPDETLYAWVEMAELFV----CQKT----------------------FKDAYVKALALYA 56 (137) Q Consensus 6 ~~~~i~~Fr~~~---PeF~~vpD~~i~~~l~~A~~~v----~~~~----------------------~g~~~~~a~~ll~ 56 (137) ++ +++..|.-- +.+.+-.|+.|+.||.-|...+ +.+- ..+....|+.|++ T Consensus 1 iv-tLee~K~HlRid~dd~deDD~li~~~i~AA~~~v~~~l~r~l~~~~~~~~~~~~~~~~~~~~~~~p~~i~~AiLllv 79 (115) T protein:vir:81 1 MI-TLAMVQRHLQAELYEDDERDYVMQQLLPAARESAELFINRKLYDTQADMLADQAAGVDPAGQLLITRTVEQAILLTL 79 (115) T ss_pred CC-CHHHHHHHcCCCCCCCccchHHHHHHHHHHHHHHHHHhCCccccccccccccccccCCCCcccccCHHHHHHHHHHH Confidence 44 589888843 4455678999999999988665 2221 1234568999999 Q ss_pred HHHHHHhccccccccccccccccceeeeeccceeEeeecccCCcchhhhhcCHHHHHHH--HHHHHhcCC Q lcl|NC_015456. 57 LHLAFLDGALKGEDEDIESYSRRVTSFSLSGEFSQTFGEVTKNQSENMMLSTPWGKIFE--QLKARRRGR 124 (137) Q Consensus 57 AH~l~l~~~~~~~~~~~~~~~g~v~S~s~~G~vSvSy~~~~~~~~~~wl~~T~YGq~y~--~L~r~~g~G 124 (137) +||-...- . .+ +|. ...-|+|.+.+ ..|+..|+. T Consensus 80 g~~Y~NRE-----~------------v~-~~~----------------~~elP~~~~~LL~pyR~~~g~~ 115 (115) T protein:vir:81 80 GEWYSSRE-----Q------------VW-TKG----------------AGLVTSSAQNLLHPYRKFAGVR 115 (115) T ss_pred HHHHhccc-----h------------hc-chh----------------hhhcCHHHHHHHHHHHhhcCCC Confidence 99986420 0 00 111 12234443322 344444443 No 60 >protein:vir:3970 Length: 110 # NCBI annotation: hypothetical protein # Family: family:all:372 # MgeID: mge:83 # MgeName: ul36 # Cross-refs: genbank:acc:NP_663678;genbank:gi:21716115;genbank:GeneID:951203 Probab=30.55 E-value=1.6 Score=19.51 Aligned_cols=101 Identities=16% Similarity=0.177 Sum_probs=57.4 Q ss_pred chHHHHHHHHhhhccCCCHHHHHHHHHHHHHHhCC------CCCchHHHHHHH-HHHHHHHHHhcccccccccccccccc Q lcl|NC_015456. 7 IAVIEQMRKLVPALRKVPDETLYAWVEMAELFVCQ------KTFKDAYVKALA-LYALHLAFLDGALKGEDEDIESYSRR 79 (137) Q Consensus 7 ~~~i~~Fr~~~PeF~~vpD~~i~~~l~~A~~~v~~------~~~g~~~~~a~~-ll~AH~l~l~~~~~~~~~~~~~~~g~ 79 (137) +++++++|.+-+. -.|+.|+.+|++|...|.. +...+.++..+. +-++++= +...+ + T Consensus 1 M~iL~~vK~~lgi---~~D~lL~~li~~a~~~i~~~l~~~~~~iP~~l~~iv~evav~ryN----R~g~E---------G 64 (110) T protein:vir:39 1 MAITDDLKKLLGG---SSDERLEVIEKRTRERLLLILSSNIKEVPPELEYVVLDVSLKRFN----RIGQE---------G 64 (110) T ss_pred CchHHHHHHhcCC---ChhHHHHHHHHHHHHHHHHHhCCChhhhhhHHHHHHHHHHHHHhc----ccccc---------c Confidence 7889999998765 3699999999999987732 124444443332 3333332 22222 2 Q ss_pred ceeeeeccceeEeeecccCCcchhhhhcCHHHHHHHHHHHHhcCCCccccCCcccccC Q lcl|NC_015456. 80 VTSFSLSGEFSQTFGEVTKNQSENMMLSTPWGKIFEQLKARRRGRFALMTGLRGGCHQ 137 (137) Q Consensus 80 v~S~s~~G~vSvSy~~~~~~~~~~wl~~T~YGq~y~~L~r~~g~Gg~~~~g~~~~c~~ 137 (137) .+|.| ++-+|+||... -..+|-..+-++++..... ++-..|+-| T Consensus 65 ~~S~S-eeG~S~sf~~~---------d~~~y~~~l~~y~~~~~~~----~~~~~g~~~ 108 (110) T protein:vir:39 65 MQSYS-QEGLSMTFSES---------DFDEYADEIESWRKSKETE----GDKKIGRFR 108 (110) T ss_pred cceee-cCCeeeeeccc---------CcchhHHHHHHHhhhcccc----ccCcceeee Confidence 46888 57789999521 1235555555555443221 111224455 No 61 >protein:vir:81159 Length: 95 # NCBI annotation: putative DNA packaging protein # Family: family:all:316 # MgeID: mge:1892 # MgeName: Geobacillus virus E2 # Cross-refs: genbank:acc:YP_001285813;genbank:gi:148747734;genbank:GeneID:5247202 Probab=30.01 E-value=1.6 Score=19.45 Aligned_cols=88 Identities=9% Similarity=0.039 Sum_probs=44.0 Q ss_pred CCccccchHHHHHHHHhh-hccCCCHHHHHHHHHHHHHHhCCC------CCchHHHHHHHHHHHHHHHHhcccccccccc Q lcl|NC_015456. 1 MNQENLIAVIEQMRKLVP-ALRKVPDETLYAWVEMAELFVCQK------TFKDAYVKALALYALHLAFLDGALKGEDEDI 73 (137) Q Consensus 1 m~~~~~~~~i~~Fr~~~P-eF~~vpD~~i~~~l~~A~~~v~~~------~~g~~~~~a~~ll~AH~l~l~~~~~~~~~~~ 73 (137) |. +=+++.+|.--= +| +..|+.|+.+|+-|+.++.+. ......+.|+.++++|+-.-....... . T Consensus 1 Mm----~vtLee~K~~LRID~-d~dD~lI~~li~aA~~~i~~~~g~~~~~~~~~~~~Avl~lv~~~YeNRe~~~~~---~ 72 (95) T protein:vir:81 1 MM----IVTLEEVKNWLRVDF-SDDDALITTLINAAEEYLKNATGTTFDATNHLAKIFCMTLIADWYENRELVGRA---S 72 (95) T ss_pred CC----cCCHHHHHHHcCCCC-CcchHHHHHHHHHHHHHHHHhhccccccCchHHHHHHHHHHHHHHhhccccccc---c Confidence 32 225777776321 22 468999999999999998421 234677899999999998654311100 0 Q ss_pred ccccccceeeeeccceeEeeecccCCcchhhhhcCH Q lcl|NC_015456. 74 ESYSRRVTSFSLSGEFSQTFGEVTKNQSENMMLSTP 109 (137) Q Consensus 74 ~~~~g~v~S~s~~G~vSvSy~~~~~~~~~~wl~~T~ 109 (137) ...+-.|.|. -....-.| +..|. T Consensus 73 ~~~p~~v~sl--l~~lr~~~-----------~~~~~ 95 (95) T protein:vir:81 73 DQVRPILQSI--LAQLTYAY-----------GGETA 95 (95) T ss_pred ccccHHHHHH--HHHhhhcc-----------ccccC Confidence 0000000000 00111111 11111 No 62 >protein:vir:79701 Length: 144 # NCBI annotation: hypothetical protein # Family: family:all:1399 # MgeID: mge:1873 # MgeName: LL-H # Cross-refs: genbank:acc:YP_001285884;genbank:gi:148750841;genbank:GeneID:5220403 Probab=29.08 E-value=1.7 Score=19.33 Aligned_cols=113 Identities=19% Similarity=0.133 Sum_probs=53.3 Q ss_pred CCccccchHHHHHHHHhhhccC-----CCHHHHHHHHHHHHHHhCCCCC--------------c--------hH----HH Q lcl|NC_015456. 1 MNQENLIAVIEQMRKLVPALRK-----VPDETLYAWVEMAELFVCQKTF--------------K--------DA----YV 49 (137) Q Consensus 1 m~~~~~~~~i~~Fr~~~PeF~~-----vpD~~i~~~l~~A~~~v~~~~~--------------g--------~~----~~ 49 (137) |- +-|+ |+||.+ +.++.++..+..|...||.-.. + .. .. T Consensus 1 ~~-----pYLT-----y~ef~~lg~~~~~~d~F~kllk~A~~~ID~~T~y~~~~y~~~~i~~d~~~d~~~~~~~r~~~vK 70 (144) T protein:vir:79 1 MK-----PYLT-----TSDFEKLGYELKKPDNFGKLLKSATVLINQICSYYDPAFAYHDLEADSQADPDSYLFRQAMAFK 70 (144) T ss_pred CC-----cccc-----hhhhhhhCCCCcchhhhhhHHHHHHHHhhhhhhhhccccccccccccccccchhhhhHHHHHHH Confidence 32 2222 445443 4557789999999988875221 0 11 12 Q ss_pred HHHHHHHHHHHHHhccccccccccccccccceeeeeccceeEeeecccCCcchhhhhcCHHHHHHHHHHHHhcCCCcccc Q lcl|NC_015456. 50 KALALYALHLAFLDGALKGEDEDIESYSRRVTSFSLSGEFSQTFGEVTKNQSENMMLSTPWGKIFEQLKARRRGRFALMT 129 (137) Q Consensus 50 ~a~~ll~AH~l~l~~~~~~~~~~~~~~~g~v~S~s~~G~vSvSy~~~~~~~~~~wl~~T~YGq~y~~L~r~~g~Gg~~~~ 129 (137) +|+++ ..+++...|...... -..+.++|.++ |..||||.+.+.+... -+.+.-...=+.++...|..-+=|+ T Consensus 71 kA~a~-QIeY~~~~G~~sa~e----~~~~~~~S~sv-Grtsvs~~~~~~~s~t--~~~~~v~~~a~~yL~~tGLLYrGV~ 142 (144) T protein:vir:79 71 KAVAL-EMLFLEDSGYSSAYD----VAQGALNSFTV-GHTSMSLNPSAGQNLT--VGSTGVVKSAYDLLGRYGLLFSGVA 142 (144) T ss_pred HHHHH-HHHHHHHcCCcchhh----hhcCccceeEe-cceEEeecCCCccccc--cccccccHHHHHHHhhcCccccccc Confidence 33333 334444433322211 12345788885 9999999765543211 0111122233445555444222222 Q ss_pred CC Q lcl|NC_015456. 130 GL 131 (137) Q Consensus 130 g~ 131 (137) -+ T Consensus 143 s~ 144 (144) T protein:vir:79 143 SL 144 (144) T ss_pred cC Confidence 23 No 63 >protein:vir:4831 Length: 105 # NCBI annotation: ORF27 # Family: family:all:734 # ACLAME annotation(s): phi:0000018 - phage genome packaging # MgeID: mge:105 # MgeName: 7201 # Cross-refs: genbank:acc:NP_038328;genbank:gi:9634654;genbank:GeneID:1262588 Probab=26.99 E-value=1.2 Score=20.13 Aligned_cols=93 Identities=11% Similarity=0.121 Sum_probs=44.8 Q ss_pred CCccccchHHHHHHHHhh-hccCCCHHHHHHHHHHHHHHhCC-----CCC------chHHHHHHHHHHHHHHHHhccccc Q lcl|NC_015456. 1 MNQENLIAVIEQMRKLVP-ALRKVPDETLYAWVEMAELFVCQ-----KTF------KDAYVKALALYALHLAFLDGALKG 68 (137) Q Consensus 1 m~~~~~~~~i~~Fr~~~P-eF~~vpD~~i~~~l~~A~~~v~~-----~~~------g~~~~~a~~ll~AH~l~l~~~~~~ 68 (137) |.. +++.+|.--= .| |..|+.|+.+|+-|+.++.. ..+ ...++.|+.++++|+-.-...... T Consensus 1 M~v-----tLee~K~~LRID~-dddD~lI~~~i~aA~~yi~~~ig~~~~~~~~~~~~~~~~~Avl~lv~~~YeNR~~~~~ 74 (105) T protein:vir:48 1 MSV-----SKTSIMQTLNLDE-TDDTALIPAYIESAKQYIINAVGSDSKFYDLENVQPLFDTAVIALTSSYFTYRVALTD 74 (105) T ss_pred Ccc-----cHHHHHHHcCCCC-ccchHHHHHHHHHHHHHHHHhhCCCCccccccCCchHHHHHHHHHHHHHHhhhhhccC Confidence 444 4888887321 22 46899999999999999832 111 246789999999999875432110 Q ss_pred cccccccccccceeeeeccceeEeeecccCCcchh Q lcl|NC_015456. 69 EDEDIESYSRRVTSFSLSGEFSQTFGEVTKNQSEN 103 (137) Q Consensus 69 ~~~~~~~~~g~v~S~s~~G~vSvSy~~~~~~~~~~ 103 (137) . .....+-.|.|. -.+..-.|...--..+++ T Consensus 75 ~--~~~~ip~~v~sl--i~~lR~~y~~~~e~~~~g 105 (105) T protein:vir:48 75 T--VTYPINLTLNSI--IGQLRGLYATYSEVVANG 105 (105) T ss_pred c--ccchhhHHHHHH--HHHHhhhhhhhhhcccCC Confidence 0 000001011000 011111111100000111 No 64 >protein:vir:9576 Length: 131 # NCBI annotation: gp42 # Family: family:all:1271 # MgeID: mge:171 # MgeName: SM1 # Cross-refs: genbank:acc:NP_862881;genbank:gi:32469473;genbank:GeneID:1461318 Probab=26.88 E-value=1.9 Score=19.06 Aligned_cols=111 Identities=12% Similarity=-0.038 Sum_probs=49.8 Q ss_pred CCccccchHHHHHHHHhhhccCCCHHHHHHHHHHHHHHhCCC--CCc--------------hHHHHHHHHHHHHHHHHhc Q lcl|NC_015456. 1 MNQENLIAVIEQMRKLVPALRKVPDETLYAWVEMAELFVCQK--TFK--------------DAYVKALALYALHLAFLDG 64 (137) Q Consensus 1 m~~~~~~~~i~~Fr~~~PeF~~vpD~~i~~~l~~A~~~v~~~--~~g--------------~~~~~a~~ll~AH~l~l~~ 64 (137) |. ...+++++.+++.++.+=-.++++..|++|..+|-.. .++ ....+...-+|+--|.- T Consensus 1 m~---~fAtv~D~~~rwr~Lt~~E~~ra~~LL~~As~~ir~~~p~~~~~l~~~~~~~~~~~~~~~~V~~~~V~Ral~~-- 75 (131) T protein:vir:95 1 ME---NFATVEDLKKLWRALKFDEEKRAEALLEVVSHSLRVEAKKVGKDLDGLVATDPSFTMVVKSVTVDVVARTLMT-- 75 (131) T ss_pred CC---ccCCHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHhhhhccCCccccccCCccchHHHHHHHHHHHHHHhcC-- Confidence 54 4457899999997776555668999999999988321 111 11222222333332211 Q ss_pred cccccccccccccccc-eeeeeccce--eEeeecccCCcchhhhhcCHHHHHHHHHHHHhcCC-CccccCCccccc Q lcl|NC_015456. 65 ALKGEDEDIESYSRRV-TSFSLSGEF--SQTFGEVTKNQSENMMLSTPWGKIFEQLKARRRGR-FALMTGLRGGCH 136 (137) Q Consensus 65 ~~~~~~~~~~~~~g~v-~S~s~~G~v--SvSy~~~~~~~~~~wl~~T~YGq~y~~L~r~~g~G-g~~~~g~~~~c~ 136 (137) .. ...|.. .|.+ .|.. |.+|.+|..+ |-.|.- .+++.|.+ .++.+=---|.. T Consensus 76 ---~~-----~~~G~tq~S~T-aG~ys~S~t~~~p~g~-----lylt~~------e~~~LGl~~~r~~~i~~~~~~ 131 (131) T protein:vir:95 76 ---ST-----DQEPMTQVAES-ALGYSFSGSYLVPGGG-----LFIKDS------ELKRLGLKKQRYGVIDIYGTD 131 (131) T ss_pred ---CC-----CCCCceeeeee-cccceeeeeeecCCCC-----ceeChH------HHHHhCCCCCceeEEeeccCC Confidence 00 111221 3455 5866 5556655432 112211 22223331 111110011111 No 65 >protein:vir:741 Length: 110 # NCBI annotation: unknown # Family: family:all:372 # MgeID: mge:14 # MgeName: Tuc2009 # Cross-refs: genbank:acc:NP_108718;genbank:gi:13487840;genbank:GeneID:920873 Probab=25.88 E-value=2 Score=18.92 Aligned_cols=101 Identities=16% Similarity=0.136 Sum_probs=57.5 Q ss_pred chHHHHHHHHhhhccCCCHHHHHHHHHHHHHHhCCC------CCchHHHH-HHHHHHHHHHHHhcccccccccccccccc Q lcl|NC_015456. 7 IAVIEQMRKLVPALRKVPDETLYAWVEMAELFVCQK------TFKDAYVK-ALALYALHLAFLDGALKGEDEDIESYSRR 79 (137) Q Consensus 7 ~~~i~~Fr~~~PeF~~vpD~~i~~~l~~A~~~v~~~------~~g~~~~~-a~~ll~AH~l~l~~~~~~~~~~~~~~~g~ 79 (137) +++++++|.+-.. -.|+.|+.+|+.|...+... ...+.++. ...+-++|+= +...+ + T Consensus 1 M~~L~~vK~~lgi---~~D~lL~~li~~a~~~i~~~l~~~~~~iP~~l~~iv~evav~ryN----R~g~E---------G 64 (110) T protein:vir:74 1 MAITYEIKKLLGG---SSDERLEIIEKRTRERLLLILGSDLKEVPPELEYVVLDVSLKRFN----RIGQE---------G 64 (110) T ss_pred ChHHHHHHHHcCC---ChhHHHHHHHHHHHHHHHHHhCCChhhhhHHHHHHHHHHHHHHhc----ccCcc---------c Confidence 7899999998654 36899999999999887532 12333332 2334444432 22222 2 Q ss_pred ceeeeeccceeEeeecccCCcchhhhhcCHHHHHHHHHHHHhcCCCccccCCcccccC Q lcl|NC_015456. 80 VTSFSLSGEFSQTFGEVTKNQSENMMLSTPWGKIFEQLKARRRGRFALMTGLRGGCHQ 137 (137) Q Consensus 80 v~S~s~~G~vSvSy~~~~~~~~~~wl~~T~YGq~y~~L~r~~g~Gg~~~~g~~~~c~~ 137 (137) .+|.| ++-+|+||... -..+|-..+-+.++.. .--++-..|+-| T Consensus 65 ~~S~S-eeG~S~sf~~~---------d~~~y~~~l~~y~~~~----~~~~~~~~~~~~ 108 (110) T protein:vir:74 65 MQSYS-QEGLSMTFSES---------DFDEYADEIESRRKSK----ETEGDKKIGRFR 108 (110) T ss_pred cceee-cCCeeeeeccc---------chhhHHHHHHHHHhhc----cccccCcceeee Confidence 46788 57789999531 1234555555544432 122333445556 No 66 >protein:vir:99517 Length: 124 # NCBI annotation: putative protein # Family: family:all:372 # MgeID: mge:1559 # MgeName: Lj928 # Cross-refs: genbank:acc:NP_958539;genbank:gi:41179321;genbank:GeneID:2717155 Probab=24.21 E-value=2.2 Score=18.70 Aligned_cols=112 Identities=15% Similarity=0.141 Sum_probs=63.7 Q ss_pred CCccccchHHHHHHHHhhhccCCCHHHHHHHHHHHHHHhCC----CC-CchHHHH-HHHHHHHHHHHHhccccccccccc Q lcl|NC_015456. 1 MNQENLIAVIEQMRKLVPALRKVPDETLYAWVEMAELFVCQ----KT-FKDAYVK-ALALYALHLAFLDGALKGEDEDIE 74 (137) Q Consensus 1 m~~~~~~~~i~~Fr~~~PeF~~vpD~~i~~~l~~A~~~v~~----~~-~g~~~~~-a~~ll~AH~l~l~~~~~~~~~~~~ 74 (137) |+.. ..++|++.|.+---=.+..|+.|+.+|+.|...|.. +. ..+.++. ...+-++|+=.+ ..+ T Consensus 1 m~~~-~~~~Le~vK~~LgI~d~~~D~lL~~lI~~a~~~i~~~l~~~e~iP~~L~~Iv~evavkryNR~----g~E----- 70 (124) T protein:vir:99 1 MNDV-LDDQLKKLKTALQLTDTKHDDLLKLYLEDATDFLKLRLSITGVIPTEMLAIVRGAAVKKFNRF----KNE----- 70 (124) T ss_pred CCcc-hHHHHHHHHHHhCCCCcchhHHHHHHHHHHHHHHHHhcCCcccchhHHHHHHHHHHHHHhccc----CCc----- Confidence 8865 455789888875433456799999999999987742 22 4444433 444555665322 221 Q ss_pred cccccceeeeeccceeEeeecccCCcchhhhhcCHHHHHHHHHHHHh---cCCCccccCC-cccccC Q lcl|NC_015456. 75 SYSRRVTSFSLSGEFSQTFGEVTKNQSENMMLSTPWGKIFEQLKARR---RGRFALMTGL-RGGCHQ 137 (137) Q Consensus 75 ~~~g~v~S~s~~G~vSvSy~~~~~~~~~~wl~~T~YGq~y~~L~r~~---g~Gg~~~~g~-~~~c~~ 137 (137) +.+|.| ++-+|+||...- .-+|-..+-++++.. |. ++++..- .++-.| T Consensus 71 ----G~~S~S-eeG~S~sf~d~d---------~~~y~~~L~~y~~~~~~~g~-~~fi~~~~~~~~~~ 122 (124) T protein:vir:99 71 ----GMASYS-QDGESITFASSD---------FDEWEDEINQWRKDHTGMNK-GMWVNPYEIRQNGR 122 (124) T ss_pred ----ccceee-eCceeeeecccC---------hhhHHHHHHHHhhccCcCCc-eeeecCccccCCCC Confidence 347888 467799996321 123444444443333 33 3444444 445555 No 67 >protein:vir:100211 Length: 114 # NCBI annotation: Hypothetical protein # Family: family:all:6491 # MgeID: mge:1524 # MgeName: phi AT3 # Cross-refs: genbank:acc:YP_025032;genbank:gi:48697265;genbank:GeneID:2948309 Probab=23.58 E-value=2.3 Score=18.61 Aligned_cols=97 Identities=10% Similarity=0.132 Sum_probs=48.0 Q ss_pred CCccccch---HHHHHHHHhh-hccCCCHHHHHHHHHHHHHHhCCC--------CCc--hHHHHHHHHHHHHHHHHhccc Q lcl|NC_015456. 1 MNQENLIA---VIEQMRKLVP-ALRKVPDETLYAWVEMAELFVCQK--------TFK--DAYVKALALYALHLAFLDGAL 66 (137) Q Consensus 1 m~~~~~~~---~i~~Fr~~~P-eF~~vpD~~i~~~l~~A~~~v~~~--------~~g--~~~~~a~~ll~AH~l~l~~~~ 66 (137) |+.+-.-+ +++.+|.--= .| +.+|+.|+.+|.-|+.+|... .+. ..+..|+.+|++|+-...... T Consensus 1 ~~~~~~~~~~vtLeevK~~LRID~-ddDD~lI~~lI~aA~~yI~~aig~~~~~~~~~~~~~~~~Avl~Lv~~~YeNR~~~ 79 (114) T protein:vir:10 1 MADETADTVGVTADDMQSYLNLDS-DGDASILEGLISTAESAVMNAIDDTIAVEVYRTYPLFNQAVRVLVDFMYYSRGTL 79 (114) T ss_pred CCCcccccccccHHHHHHHhCCCC-ccchHHHHHHHHHHHHHHHHhhCCCCCcccccCchhHHHHHHHHHHHHHhhhhhh Confidence 87764333 2555655221 22 468999999999999998321 122 356789999999998765432 Q ss_pred cccccccccccccceeeeeccceeEeeec--cc-CCcchh Q lcl|NC_015456. 67 KGEDEDIESYSRRVTSFSLSGEFSQTFGE--VT-KNQSEN 103 (137) Q Consensus 67 ~~~~~~~~~~~g~v~S~s~~G~vSvSy~~--~~-~~~~~~ 103 (137) ... ....+- .|.|.= -+..-+|-. .+ .+..++ T Consensus 80 ~~~--~~~vp~-~v~slI--~qLR~~~~~d~~~~~~~~d~ 114 (114) T protein:vir:10 80 SDQ--SKAYPP-SYAYMI--NSIRWKIQRDQAAKAGGNDG 114 (114) T ss_pred ccc--cccccH-HHHHHH--HHHHHHhhhhhhhhccCCCC Confidence 111 111111 111110 011112111 11 122333 No 68 >protein:vir:4857 Length: 104 # NCBI annotation: putative DNA packaging protein # Family: family:all:734 # ACLAME annotation(s): phi:0000018 - phage genome packaging # MgeID: mge:106 # MgeName: DT1 # Cross-refs: genbank:acc:NP_049397;genbank:gi:9632425;genbank:GeneID:1258493 Probab=23.53 E-value=1.8 Score=19.24 Aligned_cols=92 Identities=12% Similarity=0.162 Sum_probs=45.0 Q ss_pred CCccccchHHHHHHHHhh-hccCCCHHHHHHHHHHHHHHhCCC-----C------CchHHHHHHHHHHHHHHHHhccccc Q lcl|NC_015456. 1 MNQENLIAVIEQMRKLVP-ALRKVPDETLYAWVEMAELFVCQK-----T------FKDAYVKALALYALHLAFLDGALKG 68 (137) Q Consensus 1 m~~~~~~~~i~~Fr~~~P-eF~~vpD~~i~~~l~~A~~~v~~~-----~------~g~~~~~a~~ll~AH~l~l~~~~~~ 68 (137) |... ++.+|.--= .| +..|+.|+.+|+-|..+|... . ....++.|+.++++|+-.-...... T Consensus 1 M~vt-----LeevK~~LRID~-d~dD~li~~~i~aA~~~i~~~ig~~~~~~~~~~~~~~~~~Avl~lv~~~Y~NR~~~~~ 74 (104) T protein:vir:48 1 MSVS-----KETIMQTLNLDE-TDDTALIPAYIESARQYVVNSVGDDPKFYNLDSVRALFDTAVIALTSSYFTYRVALTD 74 (104) T ss_pred Cccc-----HHHHHHHcCCCC-ccchHHHHHHHHHHHHHHHHhhCCCCCcccccCCChhHHHHHHHHHHHHHhhhhhhcc Confidence 5554 888877322 23 468999999999999987321 1 1246788999999999875432111 Q ss_pred cccccccccccceeeeeccceeEeeecccCCcch Q lcl|NC_015456. 69 EDEDIESYSRRVTSFSLSGEFSQTFGEVTKNQSE 102 (137) Q Consensus 69 ~~~~~~~~~g~v~S~s~~G~vSvSy~~~~~~~~~ 102 (137) . .....+-.|.| +-....-.|..---..++ T Consensus 75 ~--~~~~ip~~v~s--li~~lR~~y~~~~~~~~~ 104 (104) T protein:vir:48 75 T--ATYPVNLTLNS--IIGQLRGLYATYSEERGD 104 (104) T ss_pred c--ccchhhHHHHH--HHHHHHHhhhhhcccCCC Confidence 0 00000000000 001111112111100111 No 69 >protein:vir:97069 Length: 115 # NCBI annotation: hypothetical protein # Family: family:all:363 # MgeID: mge:1653 # MgeName: OP1 # Cross-refs: genbank:acc:YP_453566;genbank:gi:84662601;genbank:GeneID:5142484 Probab=23.29 E-value=2.3 Score=18.57 Aligned_cols=84 Identities=10% Similarity=-0.090 Sum_probs=46.5 Q ss_pred cchHHHHHHHHh---hhccCCCHHHHHHHHHHHHHHh----CCCC----------------------CchHHHHHHHHHH Q lcl|NC_015456. 6 LIAVIEQMRKLV---PALRKVPDETLYAWVEMAELFV----CQKT----------------------FKDAYVKALALYA 56 (137) Q Consensus 6 ~~~~i~~Fr~~~---PeF~~vpD~~i~~~l~~A~~~v----~~~~----------------------~g~~~~~a~~ll~ 56 (137) ++ +++..|.-- +.+.+-+|+.|+.+|.-|...+ +... +......|+.|++ T Consensus 1 mv-tLee~K~hLRid~d~~d~DDali~~~i~AA~~~v~~~l~r~l~~~~~~~~~~~~~~~~~~~~~~~p~~i~~AiLllv 79 (115) T protein:vir:97 1 MI-TLAMMQRHLQAELYEDDERDYVMQQLLPAARESAELFLNRKLYDVQADMLADQVLGVDPSDQLLITRTVEQAILLTV 79 (115) T ss_pred CC-CHHHHHHHcCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCcccchhhcccccccccCCCcccccCCHHHHHHHHHHH Confidence 44 599998843 4555567889999999887554 3221 2234567999999 Q ss_pred HHHHHHhccccccccccccccccceeeeeccceeEeeecccCCcchhhhhcCHHHHHHH--HHHHHhcCC Q lcl|NC_015456. 57 LHLAFLDGALKGEDEDIESYSRRVTSFSLSGEFSQTFGEVTKNQSENMMLSTPWGKIFE--QLKARRRGR 124 (137) Q Consensus 57 AH~l~l~~~~~~~~~~~~~~~g~v~S~s~~G~vSvSy~~~~~~~~~~wl~~T~YGq~y~--~L~r~~g~G 124 (137) +||-...- . .+ +|+ .+.-|+|.+.+ .+|+-.|+. T Consensus 80 g~~Y~NRE-----~------------v~-~~~----------------~~elP~~~~~LL~pyR~~~Gv~ 115 (115) T protein:vir:97 80 GEWYSSRE-----Q------------VW-IKG----------------AGLVTSSAQNLLHPYRKFAGVR 115 (115) T ss_pred HHHHhccc-----c------------cc-ccc----------------ccccCHHHHHHHHHHHhhcCCC Confidence 99986420 0 00 111 12234444322 233333332 No 70 >protein:vir:105899 Length: 116 # NCBI annotation: head completion protein # Family: family:all:789 # ACLAME annotation(s): phi:0000067 - phage portal associated protein # MgeID: mge:1514 # MgeName: phiETA3 # Cross-refs: genbank:acc:YP_001004377;genbank:gi:122891832;genbank:GeneID:4712370 Probab=22.04 E-value=1.8 Score=19.15 Aligned_cols=104 Identities=13% Similarity=0.130 Sum_probs=55.9 Q ss_pred chHHHHHHHHh-hhccC-CCHH------HHHHHHHHHHHHhCCCCC----chHHHHHHHHHHHHHHHHhccccccccccc Q lcl|NC_015456. 7 IAVIEQMRKLV-PALRK-VPDE------TLYAWVEMAELFVCQKTF----KDAYVKALALYALHLAFLDGALKGEDEDIE 74 (137) Q Consensus 7 ~~~i~~Fr~~~-PeF~~-vpD~------~i~~~l~~A~~~v~~~~~----g~~~~~a~~ll~AH~l~l~~~~~~~~~~~~ 74 (137) ++.-++.+.+- --.-+ -.|+ .|..++.+|+.+ |+..| .+-+..++..|+|--+.-+.+ . T Consensus 1 ~~~~~DVk~ln~k~~~~~tsD~~d~~l~ev~~~l~~A~dy-Cnn~F~~dg~~~lP~gVkkFVA~~iky~~~--------p 71 (116) T protein:vir:10 1 MTLYEDVKLLLKKNGVEVKSDEEEIFKMEVDGILEDVRDI-TNNDFMKDGQVIYPYSIKKYVADVLEYYQR--------P 71 (116) T ss_pred CchHHHHHHHhcCCCCCcccchHHHHHHhhHHHHHHHHHH-hcCcccccCCccCcchhHHHHHHHHHhhcc--------c Confidence 55566666653 12222 2232 334677887777 55577 466788999999998765432 2 Q ss_pred cccccceeeeeccceeEeeecccCCcchhhhhcCHHHHHHHHHHHHhc Q lcl|NC_015456. 75 SYSRRVTSFSLSGEFSQTFGEVTKNQSENMMLSTPWGKIFEQLKARRR 122 (137) Q Consensus 75 ~~~g~v~S~s~~G~vSvSy~~~~~~~~~~wl~~T~YGq~y~~L~r~~g 122 (137) +..+.++|.|. |.||-+|.+.--...-. .+-||=+.=|.-.|-.. T Consensus 72 ~t~~nlssRSM-GTVSYty~Te~P~~~~~--~L~PyRklrw~~~~~~~ 116 (116) T protein:vir:10 72 EVKKNLKSRSM-GTVSYTYNDGVPDYISG--VLNRYKRAKFHPFKPIR 116 (116) T ss_pred ccccCcccccc-cceeeeccccchHHHHH--hhhhhhhcccCCCCCCC Confidence 34567888896 99999985321111001 12233222222111111 No 71 >protein:vir:94126 Length: 116 # NCBI annotation: ORF041 # Family: family:all:789 # ACLAME annotation(s): phi:0000067 - phage portal associated protein # MgeID: mge:1494 # MgeName: 96 # Cross-refs: genbank:acc:YP_240236;genbank:gi:66395926;genbank:GeneID:5133295 Probab=22.04 E-value=1.8 Score=19.15 Aligned_cols=104 Identities=13% Similarity=0.130 Sum_probs=55.9 Q ss_pred chHHHHHHHHh-hhccC-CCHH------HHHHHHHHHHHHhCCCCC----chHHHHHHHHHHHHHHHHhccccccccccc Q lcl|NC_015456. 7 IAVIEQMRKLV-PALRK-VPDE------TLYAWVEMAELFVCQKTF----KDAYVKALALYALHLAFLDGALKGEDEDIE 74 (137) Q Consensus 7 ~~~i~~Fr~~~-PeF~~-vpD~------~i~~~l~~A~~~v~~~~~----g~~~~~a~~ll~AH~l~l~~~~~~~~~~~~ 74 (137) ++.-++.+.+- --.-+ -.|+ .|..++.+|+.+ |+..| .+-+..++..|+|--+.-+.+ . T Consensus 1 ~~~~~DVk~ln~k~~~~~tsD~~d~~l~ev~~~l~~A~dy-Cnn~F~~dg~~~lP~gVkkFVA~~iky~~~--------p 71 (116) T protein:vir:94 1 MTLYEDVKLLLKKNGVEVKSDEEEIFKMEVDGILEDVRDI-TNNDFMKDGQVIYPYSIKKYVADVLEYYQR--------P 71 (116) T ss_pred CchHHHHHHHhcCCCCCcccchHHHHHHhhHHHHHHHHHH-hcCcccccCCccCcchhHHHHHHHHHhhcc--------c Confidence 55566666653 12222 2232 334677887777 55577 466788999999998765432 2 Q ss_pred cccccceeeeeccceeEeeecccCCcchhhhhcCHHHHHHHHHHHHhc Q lcl|NC_015456. 75 SYSRRVTSFSLSGEFSQTFGEVTKNQSENMMLSTPWGKIFEQLKARRR 122 (137) Q Consensus 75 ~~~g~v~S~s~~G~vSvSy~~~~~~~~~~wl~~T~YGq~y~~L~r~~g 122 (137) +..+.++|.|. |.||-+|.+.--...-. .+-||=+.=|.-.|-.. T Consensus 72 ~t~~nlssRSM-GTVSYty~Te~P~~~~~--~L~PyRklrw~~~~~~~ 116 (116) T protein:vir:94 72 EVKKNLKSRSM-GTVSYTYNDGVPDYISG--VLNRYKRAKFHPFKPIR 116 (116) T ss_pred ccccCcccccc-cceeeeccccchHHHHH--hhhhhhhcccCCCCCCC Confidence 34567888896 99999985321111001 12233222222111111 No 72 >protein:vir:94507 Length: 113 # NCBI annotation: putative DNA packaging protein # Family: family:all:372 # MgeID: mge:1510 # MgeName: phiJL-1 # Cross-refs: genbank:acc:YP_223891;genbank:gi:62327103;genbank:GeneID:5075523 Probab=21.97 E-value=2.5 Score=18.38 Aligned_cols=100 Identities=10% Similarity=0.125 Sum_probs=53.8 Q ss_pred chHHHHHHHHhhhccCCCHHHHHHHHHHHHHHhCCC---------CCchHHHH-HHHHHHHHHHHHhccccccccccccc Q lcl|NC_015456. 7 IAVIEQMRKLVPALRKVPDETLYAWVEMAELFVCQK---------TFKDAYVK-ALALYALHLAFLDGALKGEDEDIESY 76 (137) Q Consensus 7 ~~~i~~Fr~~~PeF~~vpD~~i~~~l~~A~~~v~~~---------~~g~~~~~-a~~ll~AH~l~l~~~~~~~~~~~~~~ 76 (137) ++++++.+.+-.-=.+-.|+.|+.+|+.|...+... ...+.++. ....-++|+= +.+. T Consensus 1 M~~L~~vK~~lgi~d~~~D~lL~~iI~~a~~~i~~~l~~~~~~~~~iP~~l~~Iv~evavkryN----R~g~-------- 68 (113) T protein:vir:94 1 MALLDSIKLRIGIEDTKQDDLLTDIISDVQARVLAYVNQDGLVQSELPNGLDFVIKDVTIRIYN----KIGD-------- 68 (113) T ss_pred CchHHHHHHHhCCCCCchhhHHHHHHHHHHHHHHHHhCCccchhhhhhhHHHHHHHHHHHHHhc----ccCC-------- Confidence 789999999876544467999999999999888431 12222222 2223333332 2221 Q ss_pred cccceeeeeccceeEeeecccCCcchhhhhcCHHHHHHHHHHHH---hcCCCccc Q lcl|NC_015456. 77 SRRVTSFSLSGEFSQTFGEVTKNQSENMMLSTPWGKIFEQLKAR---RRGRFALM 128 (137) Q Consensus 77 ~g~v~S~s~~G~vSvSy~~~~~~~~~~wl~~T~YGq~y~~L~r~---~g~Gg~~~ 128 (137) -+.+|.|. +-+|+||....- ..+|=-.+-++++. .+.|-|++ T Consensus 69 -EG~~S~Se-eG~S~sf~~~~d--------f~~y~~~l~~~~~~~~~~~~g~rF~ 113 (113) T protein:vir:94 69 -EGKESSSE-GNVSNTWDTPAD--------LSEYSDVLDVYRKSYKRRSAGMRFI 113 (113) T ss_pred -ccceeeec-CceeeeecCccc--------hhhHHHHHHHHHhhccCCCCCceeC Confidence 12478885 566999953110 22333333344322 22233333 No 73 >protein:vir:3992 Length: 107 # NCBI annotation: unknown # Family: family:all:734 # ACLAME annotation(s): phi:0000018 - phage genome packaging # MgeID: mge:319 # MgeName: BK5-T # Cross-refs: genbank:acc:NP_116500;genbank:gi:14251133;genbank:GeneID:921311 Probab=20.52 E-value=2.8 Score=18.17 Aligned_cols=91 Identities=13% Similarity=0.212 Sum_probs=46.5 Q ss_pred CCccccchHHHHHHHHhhhccCCCHHHHHHHHHHHHHHhCC--------CCC----c--hHHHHHHHHHHHHHHHHhccc Q lcl|NC_015456. 1 MNQENLIAVIEQMRKLVPALRKVPDETLYAWVEMAELFVCQ--------KTF----K--DAYVKALALYALHLAFLDGAL 66 (137) Q Consensus 1 m~~~~~~~~i~~Fr~~~PeF~~vpD~~i~~~l~~A~~~v~~--------~~~----g--~~~~~a~~ll~AH~l~l~~~~ 66 (137) |..+ ++++|..-- ..+=+|+.|+.+|.-|+.+|-. ..| + .+++.|+.+|++||-.-.... T Consensus 1 M~Vt-----ld~iK~sLr-iD~dDd~li~~yl~aA~~YIk~Avg~d~~~~~Fy~~~~~~~lf~~Avl~La~~~Y~nR~at 74 (107) T protein:vir:39 1 MTVT-----VDDLLDQLS-EDDDRKPQLQIYFDTAKAYVKNAVSSDTVDAPFFSVENVYPIYDVAVLSYSMDLWINRSTT 74 (107) T ss_pred Ceec-----HHHHHHHhc-CCCChhHHHHHHHHHHHHHHhhccCCcccCCCccccccchhHHHHHHHHHHHHHHHhcccc Confidence 6654 777776442 2234799999999999999931 113 2 577889999999998543211 Q ss_pred cccccccccccccceeeeeccceeEeeecc--cCCcchhhhhcCH Q lcl|NC_015456. 67 KGEDEDIESYSRRVTSFSLSGEFSQTFGEV--TKNQSENMMLSTP 109 (137) Q Consensus 67 ~~~~~~~~~~~g~v~S~s~~G~vSvSy~~~--~~~~~~~wl~~T~ 109 (137) .. . ..+.-++-+.+.-.|..- ..+.+. .+|. T Consensus 75 --~~----v---~~~v~siI~QLRg~y~~~~e~~~~~~---~~~~ 107 (107) T protein:vir:39 75 --MP----P---TTAVDHMVGQLRGLYSSWKEAQDGQN---LQTE 107 (107) T ss_pred --cc----c---chhHHHHHHHHHHhHHHHhhccCCCc---ccCC Confidence 00 0 011111122222223210 111100 1111 No 74 >protein:vir:10365 Length: 115 # NCBI annotation: conserved phage protein # Family: family:all:363 # MgeID: mge:183 # MgeName: Xp10 # Cross-refs: genbank:acc:NP_858957;genbank:gi:32128422;genbank:GeneID:2648387 Probab=20.15 E-value=2.8 Score=18.11 Aligned_cols=84 Identities=7% Similarity=-0.120 Sum_probs=46.8 Q ss_pred cchHHHHHHHHh---hhccCCCHHHHHHHHHHHHHHhC----CCC----------------------CchHHHHHHHHHH Q lcl|NC_015456. 6 LIAVIEQMRKLV---PALRKVPDETLYAWVEMAELFVC----QKT----------------------FKDAYVKALALYA 56 (137) Q Consensus 6 ~~~~i~~Fr~~~---PeF~~vpD~~i~~~l~~A~~~v~----~~~----------------------~g~~~~~a~~ll~ 56 (137) ++ +++.+|.-- +...|..|+.|+.+|+-|..++- .+- ..+....|+.|++ T Consensus 1 mv-tLe~~K~hLRid~~d~d~dD~li~~~i~AA~~~v~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~~p~~i~~AiLLlv 79 (115) T protein:vir:10 1 MI-TLAMVQRHLQAELYEDDERDYVMQQLLPAARESAELFINRKLYDTQADMLADQAAGVDPAGQLLITRTVEQAILLTV 79 (115) T ss_pred CC-CHHHHHHHcCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCcccccccccccccccccCCcccccCChHHHHHHHHHH Confidence 44 588888843 33445779999999999987762 111 1234578999999 Q ss_pred HHHHHHhccccccccccccccccceeeeeccceeEeeecccCCcchhhhhcCHHHHHHH--HHHHHhcCCCc Q lcl|NC_015456. 57 LHLAFLDGALKGEDEDIESYSRRVTSFSLSGEFSQTFGEVTKNQSENMMLSTPWGKIFE--QLKARRRGRFA 126 (137) Q Consensus 57 AH~l~l~~~~~~~~~~~~~~~g~v~S~s~~G~vSvSy~~~~~~~~~~wl~~T~YGq~y~--~L~r~~g~Gg~ 126 (137) +|+-...-. .+ +|. .+.-|+|.+.+ .+|+.-|+ + T Consensus 80 g~~Y~nRe~-----------------~~-~~~----------------~~elP~~v~~LL~pyR~~~gv--~ 115 (115) T protein:vir:10 80 GEWYANREQ-----------------VW-VKG----------------VGLVTSSAQNLLHPYRKFAGV--R 115 (115) T ss_pred HHHHhcchh-----------------cc-cch----------------hhhcCHHHHHHHHHHHhcCCC--C Confidence 999864210 00 111 23345553322 22222222 2 Done!