Query lcl|NC_015253.1_cdsid_YP_004301423.1 [gene=BrPhBA9_gp090] [protein=gp90] [protein_id=YP_004301423.1] [location=42765..43622] Match_columns 285 No_of_seqs 19 out of 22 Neff 3.8 Searched_HMMs 1612 Date Thu Nov 7 14:25:46 2013 Command /home/guerois/workspace/virfam/python/lib/hhsearch//hhsearch2 -i .//seq/seq_90 -d /home/guerois/workspace/virfam/python/profile_database/capsid_neck_tail.hhm -glob -cpu 7 -o .//seq/HHR/seq_90_vs_rec_db.hhr No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM 1 protein:vir:3160 Length: 198 # 98.0 1.9E-07 1.1E-10 57.5 10.9 187 12-281 1-198 (198) 2 protein:vir:80320 Length: 188 97.3 1.2E-05 7.2E-09 47.7 11.5 184 9-278 1-188 (188) 3 protein:vir:1435 Length: 188 # 97.0 4.6E-05 2.8E-08 44.4 11.7 184 9-278 1-188 (188) 4 protein:vir:7857 Length: 188 # 95.6 0.00022 1.3E-07 40.7 8.1 186 37-283 1-188 (188) 5 protein:vir:101652 Length: 188 95.6 0.00022 1.3E-07 40.7 8.1 186 37-283 1-188 (188) 6 protein:vir:81255 Length: 180 95.0 0.0013 8.1E-07 36.4 10.6 174 22-280 1-180 (180) 7 protein:vir:8326 Length: 201 # 94.6 0.0012 7.7E-07 36.5 9.4 192 26-274 1-201 (201) 8 protein:vir:8104 Length: 170 # 94.3 0.001 6.5E-07 36.9 8.4 167 47-285 1-169 (170) 9 protein:vir:8430 Length: 189 # 81.3 0.08 4.9E-05 26.6 8.6 177 18-264 1-189 (189) 10 protein:vir:741 Length: 110 # 74.1 0.048 3E-05 27.8 5.2 81 188-285 1-107 (110) 11 protein:vir:3970 Length: 110 # 57.4 0.18 0.00011 24.6 4.9 81 188-285 1-107 (110) 12 protein:vir:9928 Length: 118 # 53.3 0.4 0.00025 22.8 6.0 84 188-285 1-118 (118) 13 protein:vir:3615 Length: 110 # 52.5 0.24 0.00015 24.0 4.6 101 153-285 1-107 (110) 14 protein:vir:78595 Length: 158 33.6 0.81 0.0005 21.1 4.4 112 166-285 1-138 (158) 15 protein:vir:106739 Length: 158 33.6 0.81 0.0005 21.1 4.4 112 166-285 1-138 (158) 16 protein:vir:80144 Length: 91 # 28.1 1.8 0.0011 19.2 5.4 80 29-115 1-91 (91) 17 protein:vir:3639 Length: 158 # 27.1 1.6 0.001 19.4 5.0 119 166-285 1-138 (158) 18 protein:vir:101559 Length: 158 27.1 1.6 0.001 19.4 5.0 119 166-285 1-138 (158) 19 protein:vir:100211 Length: 114 23.7 1.7 0.0011 19.3 4.4 101 19-155 1-114 (114) 20 protein:vir:95774 Length: 115 23.3 2.3 0.0014 18.6 5.5 88 188-285 1-115 (115) 21 protein:vir:9877 Length: 114 # 21.9 2.5 0.0016 18.4 6.2 84 188-285 1-114 (114) 22 protein:vir:100245 Length: 113 20.6 1.2 0.00075 20.1 2.9 104 27-165 1-113 (113) No 1 >protein:vir:3160 Length: 198 # NCBI annotation: unknown # Family: family:all:28414 # MgeID: mge:316 # MgeName: PhiCh1 # Cross-refs: genbank:acc:NP_665931;genbank:gi:22091117;genbank:GeneID:951344 Probab=98.02 E-value=1.9e-07 Score=57.49 Aligned_cols=187 Identities=20% Similarity=0.237 Sum_probs=117.2 Q ss_pred CCCChhhcccccCcccccCHHHHHHHhhcCccccCCCCcccCHHHHHHHHHHHHHHHHhHhCeeeccccccchhhhhcCC Q lcl|NC_015253. 12 KRINIDAVDKMTLKDYGITADQVKAQMFGIPVVDPNTGEELGDDYYNTAIHAVVSNIEKTLSICILPRMELEMKDYYATD 91 (285) Q Consensus 12 k~i~~~~~~~~~~~d~G~t~d~ik~~mfG~~~~~p~tG~~~~D~~l~~~I~~av~~~ek~Ldi~I~PR~~~E~~Dyy~~D 91 (285) -..+|.++++--|=| | .-||++.-+ .|+.++..|..|.+.+|+-.+-.+.++-.+.--|+|+.. T Consensus 1 ~~~~~~~~~~~~~~d--------K-k~Lgv~~d~-------~D~~le~LIa~ASa~~E~~~Gr~L~a~d~t~d~~r~~G~ 64 (198) T protein:vir:31 1 MPLEPSDVESELPFD--------A-KAFGWSEEK-------FKSELETYIAAATETVEKWINTTLEPETVTRDLSRPSHV 64 (198) T ss_pred CCCCcccccccCchh--------h-Hhhcccccc-------hhhHHHHHHHHHHHHHHHhhCcEeccccceeccCcccCC Confidence 334556666545443 2 345665433 478999999999999999999999998877667888855 Q ss_pred --CeeeeccccchhhhhcceecC---CccceecChhheeecccccccccccchhhhhhccccccccccccccchhhcccc Q lcl|NC_015253. 92 --NILKLRKRPVLQVEQFNVQTP---NMVSVNYPDNWWRVSCLSGSLEIQPSVGALTQTTRYPYGDMDGRQPLSFFGGYS 166 (285) Q Consensus 92 --~fv~l~kkPi~~V~k~~l~~~---~~~~~~~P~~w~kv~~l~g~iq~~pt~~~l~~~~~~~~~~~~~~~p~~~~~g~~ 166 (285) .-+.|--+||+.|+.+...-. |+++-.. +.|.... +.. |..+.. . + T Consensus 65 g~~~L~LPq~PV~sVsSV~iD~~~~~g~~v~~~-dy~l~~~----~~~-~~~G~~---------------r--------~ 115 (198) T protein:vir:31 65 DGHDLPMPSRPVQDVVSVTIDTDRAMGRDVDED-DYWVEET----HLE-LKPGAD---------------R--------K 115 (198) T ss_pred CcceeecCCCCcceeEEEEEecCccccccccch-hhhhhhh----hhh-hccccc---------------c--------c Confidence 468888889999999877643 5555544 4555442 211 111110 0 0 Q ss_pred ccCCCcccccCcceEEEEEeccCChhhccCCCcccCCHHHHHHHHHHHHHHHHHHhcccccccccccceeeecceeeecc Q lcl|NC_015253. 167 PYETGRQNYSSQRFKVGYVAGLLPPERLGVSREWEMHPDLLFLILKASAIHVLEVWGRLIIGPGIASSTLDIDGIMERID 246 (285) Q Consensus 167 ~~~~g~~~~aPq~~~vdYvAG~~~~~r~g~~~~~evp~dL~~~I~K~a~i~Vl~~wG~liIGAGIAs~S~svDgiseSI~ 246 (285) -.+.+ +--++|+|.|||. +||+|+++.|++++....=|+... ||.|.|+.=+-+| T Consensus 116 ~~p~~-----~rnV~V~y~AGye-----------~VPeDikeAVI~lv~~~~~e~~~~-----Gi~s~T~~gesvS---- 170 (198) T protein:vir:31 116 SWPTD-----RRCITVEWEYGYE-----------EVPESPKKAIIRLVRARLRAINAE-----GISSDTIMGDSIS---- 170 (198) T ss_pred ccccc-----cceEEEEeecCcc-----------ccchHHHHHHHHHHHHHHhhhhcc-----cceeeeecCccee---- Confidence 11221 2257899999998 599999999999999988875543 5666555333222 Q ss_pred cccchhhHHHHHH---HHHHHHHHHHHHHHhh--hhh-cee Q lcl|NC_015253. 247 TTQSAMYGGASAD---ILQLNQDVQKLESGLK--AYY-AIN 281 (285) Q Consensus 247 TTQSA~~~g~~Ar---I~q~~~di~~l~~~lk--~~y-gin 281 (285) |.++ ..|-..|+ .+.. +|| |.. T Consensus 171 ---------y~~~~e~~~~~~~~~----~~~~~~~~~~~~~ 198 (198) T protein:vir:31 171 ---------YDPEDEVVLAARKDV----AGFEAPSYYGGVE 198 (198) T ss_pred ---------ecCcccchhhhhhhh----ccccCcccccCCC Confidence 1111 22222222 2332 777 566 No 2 >protein:vir:80320 Length: 188 # NCBI annotation: gp8, conserved hypothetical protein # Family: family:all:501 # MgeID: mge:1881 # MgeName: phi644-2 # Cross-refs: genbank:acc:YP_001111087;genbank:gi:134288682;genbank:GeneID:4960567 Probab=97.33 E-value=1.2e-05 Score=47.65 Aligned_cols=184 Identities=14% Similarity=0.132 Sum_probs=113.1 Q ss_pred CCCCCCChhhcccccCcccccCHHHHHHHhhcCccccCCCCcccCHHHHH-HHHHHHHHHHHhHhCeeeccccccchhhh Q lcl|NC_015253. 9 GNPKRINIDAVDKMTLKDYGITADQVKAQMFGIPVVDPNTGEELGDDYYN-TAIHAVVSNIEKTLSICILPRMELEMKDY 87 (285) Q Consensus 9 ~Npk~i~~~~~~~~~~~d~G~t~d~ik~~mfG~~~~~p~tG~~~~D~~l~-~~I~~av~~~ek~Ldi~I~PR~~~E~~Dy 87 (285) =+..-+ ...|+.-=+|.+++|.++. + |.. . +|+.+. .+|.+|.+.+|..++-.+.++-+++.-|= T Consensus 1 M~~~~~------~~ppa~ePVtL~e~K~hLR-i---d~~---~-eD~~l~~~lI~aA~~~~E~~~gr~l~~qt~~~~~~~ 66 (188) T protein:vir:80 1 MAAVLV------EYLDDAEPLTFEEVAFQCR-I---DDD---D-ERDFVERIVIPGARQAAESKSGAAIRKARYVERLSG 66 (188) T ss_pred CCceee------ccCCCCcccCHHHHHHHcC-C---CCc---h-hhHHHHHHHHHHHHHHHHHHhCCeeeeeeEEEEecC Confidence 011111 1123445678999998774 2 211 1 577775 58999999999999999999988877554 Q ss_pred hcCCCeeeeccccchhhhhcceecCCccceecChhheeecccccccccccchhhhhhccccccccccccccchhhccccc Q lcl|NC_015253. 88 YATDNILKLRKRPVLQVEQFNVQTPNMVSVNYPDNWWRVSCLSGSLEIQPSVGALTQTTRYPYGDMDGRQPLSFFGGYSP 167 (285) Q Consensus 88 y~~D~fv~l~kkPi~~V~k~~l~~~~~~~~~~P~~w~kv~~l~g~iq~~pt~~~l~~~~~~~~~~~~~~~p~~~~~g~~~ 167 (285) +.. ..+.|.+.||..|++++..-.+.....++..=+.+........+.++.+ .. T Consensus 67 ~~~-~~i~Lp~~PV~sV~sV~~~d~~G~~~~l~~~~y~l~~~~~~~~l~~~~~-------------------------~~ 120 (188) T protein:vir:80 67 FPL-AEISLSVGQVIRVDSIEIRDASGATTTLDADAFELVQLGREALLVPEGQ-------------------------AR 120 (188) T ss_pred CCC-CceEecccccceeeEEEEEcCCCcEEeecccceEEeecCCCcEEEEecC-------------------------CC Confidence 333 3478999999999999988776667777766556655544334333211 01 Q ss_pred cCCCcccccCcceEEEEEeccCChhhccCCCcccCCHHHHHHHHHHHHHHHHHHhcccccccccccceee-ecceeeecc Q lcl|NC_015253. 168 YETGRQNYSSQRFKVGYVAGLLPPERLGVSREWEMHPDLLFLILKASAIHVLEVWGRLIIGPGIASSTLD-IDGIMERID 246 (285) Q Consensus 168 ~~~g~~~~aPq~~~vdYvAG~~~~~r~g~~~~~evp~dL~~~I~K~a~i~Vl~~wG~liIGAGIAs~S~s-vDgiseSI~ 246 (285) .+. .+.++|+|+|||. + .+|+++++.|+.+++- .++.=+....|.+++....+ +|. T Consensus 121 ~p~------~~~V~V~~~AG~~--~--------~vP~~ik~aill~va~-~Ye~Re~~~~g~~~~~~P~~~v~~------ 177 (188) T protein:vir:80 121 WPF------ARAVTITYQAGVD--L--------ARYPSVRTWMLLAAAW-AYDHRELFSEGQPIGEMPGGYADV------ 177 (188) T ss_pred CCC------CceEEEEEEeccc--c--------cChHHHHHHHHHHHHH-HHhcccccccccccccccHHHHHH------ Confidence 121 2468999999993 1 3899999988887763 44444444555444433333 222 Q ss_pred cccchhhHHHHHHHHHHHHHHHHHHHHhh--hhh Q lcl|NC_015253. 247 TTQSAMYGGASADILQLNQDVQKLESGLK--AYY 278 (285) Q Consensus 247 TTQSA~~~g~~ArI~q~~~di~~l~~~lk--~~y 278 (285) |++.-+ ..| T Consensus 178 -----------------------Ll~pyRvp~~~ 188 (188) T protein:vir:80 178 -----------------------LLNPITVPPRF 188 (188) T ss_pred -----------------------HhhccCCCCCC Confidence 222111 222 No 3 >protein:vir:1435 Length: 188 # NCBI annotation: hypothetical protein # Family: family:all:501 # MgeID: mge:30 # MgeName: phiE125 # Cross-refs: genbank:acc:NP_536364;genbank:gi:17975169;genbank:GeneID:929149 Probab=96.98 E-value=4.6e-05 Score=44.37 Aligned_cols=184 Identities=14% Similarity=0.122 Sum_probs=107.3 Q ss_pred CCCCCCChhhcccccCcccccCHHHHHHHhhcCccccCCCCcccCHHHH-HHHHHHHHHHHHhHhCeeeccccccchhhh Q lcl|NC_015253. 9 GNPKRINIDAVDKMTLKDYGITADQVKAQMFGIPVVDPNTGEELGDDYY-NTAIHAVVSNIEKTLSICILPRMELEMKDY 87 (285) Q Consensus 9 ~Npk~i~~~~~~~~~~~d~G~t~d~ik~~mfG~~~~~p~tG~~~~D~~l-~~~I~~av~~~ek~Ldi~I~PR~~~E~~Dy 87 (285) =++.-+. -.|+.==+|.+++|.++. + |.+ . +|+.+ ..+|.+|.+.+|..++-.+.++-+++.-|- T Consensus 1 m~~~~~~------~ppa~epVtLae~K~~lr-i---d~~---~-eD~~l~~~li~aA~~~~E~~tgr~l~~qt~~~~~~~ 66 (188) T protein:vir:14 1 MAAVLVE------YLDDAEPLTFEEVAFQCR-I---DDD---D-ERDFVERVVIPGARQAAESKAGAAIRKARYVEHLSG 66 (188) T ss_pred CCceeee------cCCCCCccCHHHHHHHcC-C---CCc---h-hHHHHHHHHHHHHHHHHHHHhCCeeeeeeEEEEecC Confidence 0111110 122334568889998764 2 211 1 57777 569999999999999999999988876554 Q ss_pred hcCCCeeeeccccchhhhhcceecCCccceecChhheeecccccccccccchhhhhhccccccccccccccchhhccccc Q lcl|NC_015253. 88 YATDNILKLRKRPVLQVEQFNVQTPNMVSVNYPDNWWRVSCLSGSLEIQPSVGALTQTTRYPYGDMDGRQPLSFFGGYSP 167 (285) Q Consensus 88 y~~D~fv~l~kkPi~~V~k~~l~~~~~~~~~~P~~w~kv~~l~g~iq~~pt~~~l~~~~~~~~~~~~~~~p~~~~~g~~~ 167 (285) +-. .-+.|-+.||..|++++..-.......++..=|.+......-.+.+.. -.. T Consensus 67 ~~~-~~~~Lp~~Pv~sV~sV~~~d~~g~~~~l~~~~y~l~~~~~~~~l~~~~-------------------------~~~ 120 (188) T protein:vir:14 67 FPP-AEVPLSVGQVISVDSIEIRDASGATTTLDAGAFELVQLGRETLLVPAG-------------------------QAR 120 (188) T ss_pred cCC-CceEecccCcceeeEEEEEcCCCceEeecccceEEeecCCCcEEEEec-------------------------CCC Confidence 422 347888999999999988776666677765544444332221222210 011 Q ss_pred cCCCcccccCcceEEEEEeccCChhhccCCCcccCCHHHHHHHHHHHHHHHHHHhcccccccccccceee-ecceeeecc Q lcl|NC_015253. 168 YETGRQNYSSQRFKVGYVAGLLPPERLGVSREWEMHPDLLFLILKASAIHVLEVWGRLIIGPGIASSTLD-IDGIMERID 246 (285) Q Consensus 168 ~~~g~~~~aPq~~~vdYvAG~~~~~r~g~~~~~evp~dL~~~I~K~a~i~Vl~~wG~liIGAGIAs~S~s-vDgiseSI~ 246 (285) .+. .+.++|+|+|||- + ++|+++++.|+.+++- .++.=+....|.+.+....+ +| T Consensus 121 ~p~------~~~V~V~~~AG~~--~--------~vP~~ik~Aill~va~-~Y~~Re~~~~g~~~~~lP~~~v~------- 176 (188) T protein:vir:14 121 WPY------ARAVTIKYQAGID--L--------ARYPSVRSWMLLAAAW-AYDHRELYSDGQPMGEMPGGYSD------- 176 (188) T ss_pred CCC------CceEEEEEEecCc--c--------CchHHHHHHHHHHHHH-HHhcccccccccccccccHHHHH------- Confidence 121 2468999999993 1 3788999988877663 44433444444433333222 12 Q ss_pred cccchhhHHHHHHHHHHHHHHHHHHHHhh--hhh Q lcl|NC_015253. 247 TTQSAMYGGASADILQLNQDVQKLESGLK--AYY 278 (285) Q Consensus 247 TTQSA~~~g~~ArI~q~~~di~~l~~~lk--~~y 278 (285) .|+..-+ ..| T Consensus 177 ----------------------~Ll~pyRvP~~~ 188 (188) T protein:vir:14 177 ----------------------VLLNPITVPPRF 188 (188) T ss_pred ----------------------HHhhccCCCCCC Confidence 2333221 233 No 4 >protein:vir:7857 Length: 188 # NCBI annotation: gp14 # Family: family:all:11114 # MgeID: mge:150 # MgeName: CJW1 # Cross-refs: genbank:acc:NP_817464;genbank:gi:29565893;genbank:GeneID:1259086 Probab=95.58 E-value=0.00022 Score=40.67 Aligned_cols=186 Identities=15% Similarity=0.160 Sum_probs=107.7 Q ss_pred HhhcCccccCCCCcccCHHHHHHHHHHHHHHHHhHhCeeeccc-cccchhhhhcCCCeeeeccccchhhhhcceec-CCc Q lcl|NC_015253. 37 QMFGIPVVDPNTGEELGDDYYNTAIHAVVSNIEKTLSICILPR-MELEMKDYYATDNILKLRKRPVLQVEQFNVQT-PNM 114 (285) Q Consensus 37 ~mfG~~~~~p~tG~~~~D~~l~~~I~~av~~~ek~Ldi~I~PR-~~~E~~Dyy~~D~fv~l~kkPi~~V~k~~l~~-~~~ 114 (285) +-|.-.+.+.- -++-.|..+ .++.|-..+++.-++.|-|- -..+-.|-+-+.. -|-.+|+..|.++.... .|. T Consensus 1 ~~~~~~la~~~-~~da~~v~l--AL~~As~~VR~~~g~~i~~V~~dt~~id~~Gg~~--~LP~~Pvv~i~~Ve~~~~~G~ 75 (188) T protein:vir:78 1 MTFAQQLADAF-PEDADDAAT--ALSWAKSQVEGYCGRKFDLVEDDVAIVDPYCGSS--LLPSIPVVEISKVEGYLPTGN 75 (188) T ss_pred CchhhhHHHhc-CCCcchHHH--HHHHHHHHHHHHhCCcceeeeeeeeeeecCCCce--eeccCcceeeeEEEEEeeCCc Confidence 22333333321 123344555 69999999999999988773 3334456544444 45677888888876543 333 Q ss_pred cceecChhheeecccccccccccchhhhhhccccccccccccccchhhccccccCCCcccccCcceEEEEEeccCChhhc Q lcl|NC_015253. 115 VSVNYPDNWWRVSCLSGSLEIQPSVGALTQTTRYPYGDMDGRQPLSFFGGYSPYETGRQNYSSQRFKVGYVAGLLPPERL 194 (285) Q Consensus 115 ~~~~~P~~w~kv~~l~g~iq~~pt~~~l~~~~~~~~~~~~~~~p~~~~~g~~~~~~g~~~~aPq~~~vdYvAG~~~~~r~ 194 (285) .+ .|+++-+-. +--+.+.+..|+..|++-. +-.+||| |+|.+.+|.|.=||. T Consensus 76 ~~-----~~v~~r~y~----~~g~~~~l~~trg~pg~~~------~r~~~WP--------w~p~~VtVTytHGy~----- 127 (188) T protein:vir:78 76 GM-----DWVELTNYW----FKRDTGLIFDTTGLPGSEW------STGHTWP--------WLPGSLRVTYTHGYN----- 127 (188) T ss_pred cc-----ccccccccc----cccceeeecccccCccccc------ccccccc--------cCcceEEEEEecCCC----- Confidence 32 233322111 1122233434444442221 2345675 899999999999997 Q ss_pred cCCCcccCCHHHHHHHHHHHHHHHHHHhcccccccccccceeeecceeeecccccchhhHHHHHHHHHHHHHHHHHHHHh Q lcl|NC_015253. 195 GVSREWEMHPDLLFLILKASAIHVLEVWGRLIIGPGIASSTLDIDGIMERIDTTQSAMYGGASADILQLNQDVQKLESGL 274 (285) Q Consensus 195 g~~~~~evp~dL~~~I~K~a~i~Vl~~wG~liIGAGIAs~S~svDgiseSI~TTQSA~~~g~~ArI~q~~~di~~l~~~l 274 (285) |||.|+.++|..+|.--..+ . -.=.+..||..|++..+|=++. +.+.+.+ -| T Consensus 128 ------evP~eiv~lv~d~A~~~~~n------p---~~L~q~~vG~~S~tfa~~~~~s-------l~~~~~~------il 179 (188) T protein:vir:78 128 ------PVPDELIDVAIRLAREYQSN------P---ELLVSKQVGEIERRFGSVAGTS-------LSKADQA------IL 179 (188) T ss_pred ------cccHHHHHHHHHHHHHHhcC------c---ccceeeecCceeeecccccCCc-------ccchhHH------hh Confidence 79999999999998776554 1 1335788999999998754433 4422222 12 Q ss_pred hhhhceeee Q lcl|NC_015253. 275 KAYYAINIG 283 (285) Q Consensus 275 k~~ygin~g 283 (285) .+|+=..+. T Consensus 180 ~ry~l~~~~ 188 (188) T protein:vir:78 180 DRYVIATLA 188 (188) T ss_pred ccccccccC Confidence 355422222 No 5 >protein:vir:101652 Length: 188 # NCBI annotation: gp15 # Family: family:all:11114 # MgeID: mge:1515 # MgeName: 244 # Cross-refs: genbank:acc:YP_654770;genbank:gi:109302768;genbank:GeneID:4156086 Probab=95.58 E-value=0.00022 Score=40.67 Aligned_cols=186 Identities=15% Similarity=0.160 Sum_probs=107.7 Q ss_pred HhhcCccccCCCCcccCHHHHHHHHHHHHHHHHhHhCeeeccc-cccchhhhhcCCCeeeeccccchhhhhcceec-CCc Q lcl|NC_015253. 37 QMFGIPVVDPNTGEELGDDYYNTAIHAVVSNIEKTLSICILPR-MELEMKDYYATDNILKLRKRPVLQVEQFNVQT-PNM 114 (285) Q Consensus 37 ~mfG~~~~~p~tG~~~~D~~l~~~I~~av~~~ek~Ldi~I~PR-~~~E~~Dyy~~D~fv~l~kkPi~~V~k~~l~~-~~~ 114 (285) +-|.-.+.+.- -++-.|..+ .++.|-..+++.-++.|-|- -..+-.|-+-+.. -|-.+|+..|.++.... .|. T Consensus 1 ~~~~~~la~~~-~~da~~v~l--AL~~As~~VR~~~g~~i~~V~~dt~~id~~Gg~~--~LP~~Pvv~i~~Ve~~~~~G~ 75 (188) T protein:vir:10 1 MTFAQQLADAF-PEDADDAAT--ALSWAKSQVEGYCGRKFDLVEDDVAIVDPYCGSS--LLPSIPVVEISKVEGYLPTGN 75 (188) T ss_pred CchhhhHHHhc-CCCcchHHH--HHHHHHHHHHHHhCCcceeeeeeeeeeecCCCce--eeccCcceeeeEEEEEeeCCc Confidence 22333333321 123344555 69999999999999988773 3334456544444 45677888888876543 333 Q ss_pred cceecChhheeecccccccccccchhhhhhccccccccccccccchhhccccccCCCcccccCcceEEEEEeccCChhhc Q lcl|NC_015253. 115 VSVNYPDNWWRVSCLSGSLEIQPSVGALTQTTRYPYGDMDGRQPLSFFGGYSPYETGRQNYSSQRFKVGYVAGLLPPERL 194 (285) Q Consensus 115 ~~~~~P~~w~kv~~l~g~iq~~pt~~~l~~~~~~~~~~~~~~~p~~~~~g~~~~~~g~~~~aPq~~~vdYvAG~~~~~r~ 194 (285) .+ .|+++-+-. +--+.+.+..|+..|++-. +-.+||| |+|.+.+|.|.=||. T Consensus 76 ~~-----~~v~~r~y~----~~g~~~~l~~trg~pg~~~------~r~~~WP--------w~p~~VtVTytHGy~----- 127 (188) T protein:vir:10 76 GM-----DWVELTNYW----FKRDTGLIFDTTGLPGSEW------STGHTWP--------WLPGSLRVTYTHGYN----- 127 (188) T ss_pred cc-----ccccccccc----cccceeeecccccCccccc------ccccccc--------cCcceEEEEEecCCC----- Confidence 32 233322111 1122233434444442221 2345675 899999999999997 Q ss_pred cCCCcccCCHHHHHHHHHHHHHHHHHHhcccccccccccceeeecceeeecccccchhhHHHHHHHHHHHHHHHHHHHHh Q lcl|NC_015253. 195 GVSREWEMHPDLLFLILKASAIHVLEVWGRLIIGPGIASSTLDIDGIMERIDTTQSAMYGGASADILQLNQDVQKLESGL 274 (285) Q Consensus 195 g~~~~~evp~dL~~~I~K~a~i~Vl~~wG~liIGAGIAs~S~svDgiseSI~TTQSA~~~g~~ArI~q~~~di~~l~~~l 274 (285) |||.|+.++|..+|.--..+ . -.=.+..||..|++..+|=++. +.+.+.+ -| T Consensus 128 ------evP~eiv~lv~d~A~~~~~n------p---~~L~q~~vG~~S~tfa~~~~~s-------l~~~~~~------il 179 (188) T protein:vir:10 128 ------PVPDELIDVAIRLAREYQSN------P---ELLVSKQVGEIERRFGSVAGTS-------LSKADQA------IL 179 (188) T ss_pred ------cccHHHHHHHHHHHHHHhcC------c---ccceeeecCceeeecccccCCc-------ccchhHH------hh Confidence 79999999999998776554 1 1335788999999998754433 4422222 12 Q ss_pred hhhhceeee Q lcl|NC_015253. 275 KAYYAINIG 283 (285) Q Consensus 275 k~~ygin~g 283 (285) .+|+=..+. T Consensus 180 ~ry~l~~~~ 188 (188) T protein:vir:10 180 DRYVIATLA 188 (188) T ss_pred ccccccccC Confidence 355422222 No 6 >protein:vir:81255 Length: 180 # NCBI annotation: gp8 # Family: family:all:3238 # MgeID: mge:1893 # MgeName: BFK20 # Cross-refs: genbank:acc:YP_001456738;genbank:gi:157168381;uniprot:Q9MBJ7;genbank:GeneID:5580378 Probab=94.99 E-value=0.0013 Score=36.38 Aligned_cols=174 Identities=15% Similarity=0.143 Sum_probs=93.3 Q ss_pred ccCcccccCHHHHHHHhhcCccccCCCCcccCHHHHHHHHHHHHHHHHhHhCeeeccccccchhhhhcCC--Ceeeeccc Q lcl|NC_015253. 22 MTLKDYGITADQVKAQMFGIPVVDPNTGEELGDDYYNTAIHAVVSNIEKTLSICILPRMELEMKDYYATD--NILKLRKR 99 (285) Q Consensus 22 ~~~~d~G~t~d~ik~~mfG~~~~~p~tG~~~~D~~l~~~I~~av~~~ek~Ldi~I~PR~~~E~~Dyy~~D--~fv~l~kk 99 (285) +.|+ =++||+.+..+.-|+...+.++ +..|+.|.+++++.-+|-|.|-...+- .++.. ..+.|--+ T Consensus 1 ~~~p-~~l~p~~~~~~~~g~~~~~~~~---------q~~l~aA~aavRr~cGwhv~pv~~~t~--~ldg~G~~~l~LPt~ 68 (180) T protein:vir:81 1 MQPP-HGLTPEILRTYPGGHLLSKDLT---------QEHVDAVVATVRKLCGWHVFPVATTEY--SFPWRGDPEFLVPTK 68 (180) T ss_pred CCCC-ccCCcchhhhhhccccCCchhh---------HHHHHHHHHHHHHHhCCcccceeeeEE--EEecCCCeeEeCCCC Confidence 3333 3567888887777766555333 789999999999999999998544322 23333 67888888 Q ss_pred cchhhhhcceecCCccceecChhheeecccccccccccchhhhhhccccccccccccccchhhccccccCCCccccc--C Q lcl|NC_015253. 100 PVLQVEQFNVQTPNMVSVNYPDNWWRVSCLSGSLEIQPSVGALTQTTRYPYGDMDGRQPLSFFGGYSPYETGRQNYS--S 177 (285) Q Consensus 100 Pi~~V~k~~l~~~~~~~~~~P~~w~kv~~l~g~iq~~pt~~~l~~~~~~~~~~~~~~~p~~~~~g~~~~~~g~~~~a--P 177 (285) ||..|+++.. +|..+-. + .+.-.. .+.+ |+.--+.| +|. + T Consensus 69 ~vvsV~sV~~--dG~~v~~---~---------~~~~~~-------------~~~~---------G~l~r~~G--~~~rg~ 110 (180) T protein:vir:81 69 RLVSVESVTC--GDLSIPN---E---------DIVFYP-------------YGEV---------NLLRRVHG--TPWRVA 110 (180) T ss_pred cceeeeeEEE--CCeeeCC---c---------cceecc-------------cCCC---------CeeEecCC--cccccc Confidence 9999998774 4433310 0 000000 0000 11111122 221 4 Q ss_pred cceEEEEEeccCChhhccCCCcccCCHHHHHHHHHHHHHHHHHHhcccccccccccceeeecceeeecccccchhhHHHH Q lcl|NC_015253. 178 QRFKVGYVAGLLPPERLGVSREWEMHPDLLFLILKASAIHVLEVWGRLIIGPGIASSTLDIDGIMERIDTTQSAMYGGAS 257 (285) Q Consensus 178 q~~~vdYvAG~~~~~r~g~~~~~evp~dL~~~I~K~a~i~Vl~~wG~liIGAGIAs~S~svDgiseSI~TTQSA~~~g~~ 257 (285) ..+.|.|.+||+ ++| +...+|+-.|+.. .+ .-+.|+- |.+++|+|=+-.+-.|-+ + T Consensus 111 ~~V~Vt~~hGye-----------~vP-~~~aVi~~~a~ra-~~-----s~~~~v~--~~tvG~~S~~~~~~~~~~----~ 166 (180) T protein:vir:81 111 RPMTVTMTHGYE-----------DAP-GLVGVIAQMLTRA-FT-----STGGGDG--NLTVGNMSYGLSTGITPK----S 166 (180) T ss_pred ceEEEEEEeCCC-----------CCc-hHHHHHHHHHHHh-cc-----ccccccc--cceecceeeccccCCCcc----H Confidence 678899999996 577 4456664444333 33 1222343 456667664222211111 1 Q ss_pred HHHHHHHHHHHHHHHHhhhhh--ce Q lcl|NC_015253. 258 ADILQLNQDVQKLESGLKAYY--AI 280 (285) Q Consensus 258 ArI~q~~~di~~l~~~lk~~y--gi 280 (285) +.+.-|.+|. +. T Consensus 167 -----------~e~aiLdrYrl~~~ 180 (180) T protein:vir:81 167 -----------SEWLIIDQYRLHPV 180 (180) T ss_pred -----------HHHHHHHhhhccCC Confidence 1133333443 22 No 7 >protein:vir:8326 Length: 201 # NCBI annotation: gp43 # Family: family:all:3238 # MgeID: mge:154 # MgeName: Corndog # Cross-refs: genbank:acc:NP_817894;genbank:gi:29566327;genbank:GeneID:1259522 Probab=94.57 E-value=0.0012 Score=36.52 Aligned_cols=192 Identities=15% Similarity=0.134 Sum_probs=109.9 Q ss_pred ccccCHHHHHHHhhcCccccCCCCcccCHHHHHHHHHHHHHHHHhHhCeeeccccccchhhhh-cCCCeeeeccccchhh Q lcl|NC_015253. 26 DYGITADQVKAQMFGIPVVDPNTGEELGDDYYNTAIHAVVSNIEKTLSICILPRMELEMKDYY-ATDNILKLRKRPVLQV 104 (285) Q Consensus 26 d~G~t~d~ik~~mfG~~~~~p~tG~~~~D~~l~~~I~~av~~~ek~Ldi~I~PR~~~E~~Dyy-~~D~fv~l~kkPi~~V 104 (285) -=-+||+.+..+-+|.-+.| |...|..|+.|++++.|--+|.|.|-...+..++- ..+..+.|--+|+..| T Consensus 1 m~eL~P~dl~~~~~g~l~a~--------d~~~Q~aLdAA~aavRr~CGWHV~Pvv~dd~v~ldg~G~~vL~LPT~rLvsV 72 (201) T protein:vir:83 1 MAELSEADVESFTRGRLLAN--------DGETKKMLDAALLTARRYCGWKVTPVVTDDVMVLDGPDSRILNLPTRKLVTL 72 (201) T ss_pred CccccchhcchhhcCccccC--------ChHHHHHHHHHHHHHHHHhCccceeeeeeeeEEEcCCCCeeEEcCCccccee Confidence 11245666666777743322 33568999999999999999999998765554442 2557888988899888 Q ss_pred hhcceecCCccceecChhheeecccccccccccchhhhhhccccccccccccccchhhccccccCCCcccccCcceEEEE Q lcl|NC_015253. 105 EQFNVQTPNMVSVNYPDNWWRVSCLSGSLEIQPSVGALTQTTRYPYGDMDGRQPLSFFGGYSPYETGRQNYSSQRFKVGY 184 (285) Q Consensus 105 ~k~~l~~~~~~~~~~P~~w~kv~~l~g~iq~~pt~~~l~~~~~~~~~~~~~~~p~~~~~g~~~~~~g~~~~aPq~~~vdY 184 (285) +.+.- +|..+-.---.| -.-|+...-+...++ ..-.+||+ +..|.| +.|.| T Consensus 73 ~SVte--~G~~i~~~~~~~----s~~G~~~~~~~~~ll----------------~~r~gg~w-----~~~~~~--V~VT~ 123 (201) T protein:vir:83 73 SELFE--RGNPVDLSKVRW----SAGGPPGSSSRPIAV----------------RKRNGGWW-----TGEYQG--IEVKM 123 (201) T ss_pred EEEee--CCEeccCCceee----ecCCcccccccccce----------------eeecCcCC-----cCccce--EEEEE Confidence 77644 353332210011 112333322211111 11122331 223444 89999 Q ss_pred EeccCChhhccCCCcccCCHHHHHHHHHHHHHHHHHHhccccccccccccee---eecceeee-----cccccchhhHHH Q lcl|NC_015253. 185 VAGLLPPERLGVSREWEMHPDLLFLILKASAIHVLEVWGRLIIGPGIASSTL---DIDGIMER-----IDTTQSAMYGGA 256 (285) Q Consensus 185 vAG~~~~~r~g~~~~~evp~dL~~~I~K~a~i~Vl~~wG~liIGAGIAs~S~---svDgiseS-----I~TTQSA~~~g~ 256 (285) .+||+ +.|++-++.|.-.|+..+-|..| .|-+|.++ -||++.+. -++.|||.++.+ T Consensus 124 tHGy~-----------~~pa~d~~~vv~~a~~~~~q~~~-----tG~~s~~l~~~~v~~v~~~w~~~~~~~~~~~~~~~~ 187 (201) T protein:vir:83 124 THGYT-----------EDEAADWRLAVLSMVDQMSQTLA-----SGRGELDLLSKKVDDVTYRWGDPYADSAQQALFSVT 187 (201) T ss_pred ecCCC-----------CCchhHHHHHHHHHHHHHHHhhh-----cccccccceeeeeeccchhhccccchhHHHHHHHHH Confidence 99998 68898888888888877777555 44444443 56777542 167777776655 Q ss_pred HHHHHHHHHHHHHHHHHh Q lcl|NC_015253. 257 SADILQLNQDVQKLESGL 274 (285) Q Consensus 257 ~ArI~q~~~di~~l~~~l 274 (285) +- . ++=----.+.| T Consensus 188 ~~--~--~~~~~~~~~~~ 201 (201) T protein:vir:83 188 SV--F--DNFTLPCVEFL 201 (201) T ss_pred HH--H--hccccchhhcC Confidence 32 1 10000001111 No 8 >protein:vir:8104 Length: 170 # NCBI annotation: gp8 # Family: family:all:3238 # MgeID: mge:152 # MgeName: Che9c # Cross-refs: genbank:acc:NP_817685;genbank:gi:29566116;genbank:GeneID:1259310 Probab=94.27 E-value=0.001 Score=36.92 Aligned_cols=167 Identities=13% Similarity=0.027 Sum_probs=96.2 Q ss_pred CCCcccCHHHHHHHHHHHHHHHHhHhCeeeccccccchhhhh-cCCCeeeeccccchhhhhcceecCCccceecChhhee Q lcl|NC_015253. 47 NTGEELGDDYYNTAIHAVVSNIEKTLSICILPRMELEMKDYY-ATDNILKLRKRPVLQVEQFNVQTPNMVSVNYPDNWWR 125 (285) Q Consensus 47 ~tG~~~~D~~l~~~I~~av~~~ek~Ldi~I~PR~~~E~~Dyy-~~D~fv~l~kkPi~~V~k~~l~~~~~~~~~~P~~w~k 125 (285) .+|.--+|.-.|..|+.|.+++++.-+|-|-|=...+...+- ..+..+.|=-+||..|+.+. .+|..+- .-+-|| T Consensus 1 ~~~~~a~~~~~q~~l~aA~a~vR~~cGwhv~P~v~d~t~~ldg~G~~vl~LPt~pvvsV~sV~--~~G~~l~-~~~~~~- 76 (170) T protein:vir:81 1 MRGQFADNTEAQAAIDAVLAAARRWCGWHVSPVIIDDVMEVDGPGGRVLSLPTLNLVSVKSVV--ELGYALD-VSTLDR- 76 (170) T ss_pred CcccccCchHHHHHHHHHHHHHHHHhCCcccceecccEEEEeCCCCeeEECCCCcceeeEEEE--ECCeeec-Ccccee- Confidence 568888889999999999999999999999886654443331 23468888889999998875 4455432 111222 Q ss_pred ecccccccccccchhhhhhccccccccccccccchhhccccccCCCcccccCcceEEEEEeccCChhhccCCCcccCCHH Q lcl|NC_015253. 126 VSCLSGSLEIQPSVGALTQTTRYPYGDMDGRQPLSFFGGYSPYETGRQNYSSQRFKVGYVAGLLPPERLGVSREWEMHPD 205 (285) Q Consensus 126 v~~l~g~iq~~pt~~~l~~~~~~~~~~~~~~~p~~~~~g~~~~~~g~~~~aPq~~~vdYvAG~~~~~r~g~~~~~evp~d 205 (285) -+..+++ . -+.|.-..-+..++|.|.+||+.+. +|.+ T Consensus 77 ----------~~~~glL--~----------------------r~~G~~~~~~~~V~VT~tHGy~~~~---------apd~ 113 (170) T protein:vir:81 77 ----------SRRKGTL--T----------------------KPYGRWTARDGAIVVTATHGFTETE---------AADW 113 (170) T ss_pred ----------ecCCceE--E----------------------ecCCccccccceEEEEEEeCCCCCc---------cchH Confidence 1111111 0 0111000015668999999997443 6788 Q ss_pred HHHHHHHHHHHHHHHHhccccccccc-ccceeeecceeeecccccchhhHHHHHHHHHHHHHHHHHHHHhhhhhceeeee Q lcl|NC_015253. 206 LLFLILKASAIHVLEVWGRLIIGPGI-ASSTLDIDGIMERIDTTQSAMYGGASADILQLNQDVQKLESGLKAYYAINIGI 284 (285) Q Consensus 206 L~~~I~K~a~i~Vl~~wG~liIGAGI-As~S~svDgiseSI~TTQSA~~~g~~ArI~q~~~di~~l~~~lk~~ygin~g~ 284 (285) +.++|+..|- +.+. +.|+ ...|.++++++-+-.+ .|+.-.. + -+..++ +|- +|- T Consensus 114 ~~~vi~~~a~-r~~~-------s~~~~~l~~~~~~~vs~~~~~--~~~s~~~-~--------~~~iL~---~Yr---l~~ 168 (170) T protein:vir:81 114 RRAVVQLVGR-RAQT-------SRPSADLKRKKVDDVEYEWFE--TAVSVDA-E--------LSAVFS---PFR---ILP 168 (170) T ss_pred HHHHHHHHHH-Hhhc-------cCCcccceeeeccceeeeecc--cccccCH-H--------HHHhhh---hcc---cCC Confidence 8888875444 4443 2345 4788888888766431 1111111 0 111222 221 111 Q ss_pred C Q lcl|NC_015253. 285 I 285 (285) Q Consensus 285 i 285 (285) . T Consensus 169 ~ 169 (170) T protein:vir:81 169 S 169 (170) T ss_pred C Confidence 1 No 9 >protein:vir:8430 Length: 189 # NCBI annotation: gp25 # Family: family:all:3238 # MgeID: mge:155 # MgeName: Omega # Cross-refs: genbank:acc:NP_818326;genbank:gi:29566762;genbank:GeneID:1260021 Probab=81.33 E-value=0.08 Score=26.61 Aligned_cols=177 Identities=15% Similarity=0.136 Sum_probs=100.8 Q ss_pred hcccccCcccccCHHHHHHHhhcCccccCCCCcccCHHHHHHHHHHHHHHHHhHhCeeeccccccch-hhhhcCCCeeee Q lcl|NC_015253. 18 AVDKMTLKDYGITADQVKAQMFGIPVVDPNTGEELGDDYYNTAIHAVVSNIEKTLSICILPRMELEM-KDYYATDNILKL 96 (285) Q Consensus 18 ~~~~~~~~d~G~t~d~ik~~mfG~~~~~p~tG~~~~D~~l~~~I~~av~~~ek~Ldi~I~PR~~~E~-~Dyy~~D~fv~l 96 (285) --+ -+||+.+..+-+|.-+.| |-..+..|++|++++.+.-+|-|-|-...+- -|= ..+..+.| T Consensus 1 ~~~-------el~p~~~~~~~~g~l~Ad--------d~~~q~aLdAA~a~vRr~CGWHV~PV~~dtv~vdg-~G~svL~L 64 (189) T protein:vir:84 1 MAE-------ELTPEDVDTYTQGRIDKD--------DPETARALAAALSRARRACGWHVTPVVESTVRLHG-SGHDFIVL 64 (189) T ss_pred Ccc-------cccchhcchhhcceeccC--------ChhHHHHHHHHHHHHHHhhCCcccceeeeeEEEcC-CCCceEec Confidence 112 245556666777765554 2467899999999999999999999544321 122 34468888 Q ss_pred ccccchhhhhcceecCCccceecChhheeecccccccccccchhhhhhccccccccccccccchhhccccccCCCccccc Q lcl|NC_015253. 97 RKRPVLQVEQFNVQTPNMVSVNYPDNWWRVSCLSGSLEIQPSVGALTQTTRYPYGDMDGRQPLSFFGGYSPYETGRQNYS 176 (285) Q Consensus 97 ~kkPi~~V~k~~l~~~~~~~~~~P~~w~kv~~l~g~iq~~pt~~~l~~~~~~~~~~~~~~~p~~~~~g~~~~~~g~~~~a 176 (285) --+|+..|++++ -+|.++----..| .++-.|.+. -+.| .|- T Consensus 65 PTlrlvsV~sVt--~dG~~~~~~~v~~--~~~~~Gll~---------------------------------r~~G--w~~ 105 (189) T protein:vir:84 65 PTLKPVELLSIT--EDGEEVDLDEVYF--VSREPGVLY---------------------------------KKCG--WWC 105 (189) T ss_pred CCccceeeeeee--ecCeeccccccee--ccCCcceeE---------------------------------eCCC--ccc Confidence 888888888885 3455442110111 111112221 0111 222 Q ss_pred CcceEEEEEeccCChhhccCCCcccCC-HHHHHHHHHHHHHHHHHHhcccccccccccceeeecceeeeccc-------- Q lcl|NC_015253. 177 SQRFKVGYVAGLLPPERLGVSREWEMH-PDLLFLILKASAIHVLEVWGRLIIGPGIASSTLDIDGIMERIDT-------- 247 (285) Q Consensus 177 Pq~~~vdYvAG~~~~~r~g~~~~~evp-~dL~~~I~K~a~i~Vl~~wG~liIGAGIAs~S~svDgiseSI~T-------- 247 (285) .+.+.|.|..||. ++| ||+.++|+.+|.-. -+-=|++ |+| =..|..||.+.-.-+. T Consensus 106 ~g~I~VT~tHGy~-----------~~pa~di~~vv~~mA~rA-~~~~~~~--~~g-~~~~~~v~dv~~r~~~~~~~~~~~ 170 (189) T protein:vir:84 106 RGPIEVTLTHGFT-----------AEEAGDFREVVLQAVDVA-NLMVGTG--ATG-PITGLEVDDVNMRWSGLVDRSWGI 170 (189) T ss_pred CCeEEEEEEcCCC-----------CCCchhHHHHHHHHHHhh-hccCCCc--ccc-cccceeecceeeehhhhccccccc Confidence 3678999999998 355 59999999998544 2222332 211 2345666665322221 Q ss_pred -ccchhhHHHHH-HHHHHH Q lcl|NC_015253. 248 -TQSAMYGGASA-DILQLN 264 (285) Q Consensus 248 -TQSA~~~g~~A-rI~q~~ 264 (285) -|+--.+.+++ ||..+- T Consensus 171 ~~~~~l~~~~~~~~~~~~~ 189 (189) T protein:vir:84 171 AKNPMLESVLYQYRLVAIA 189 (189) T ss_pred ccchHHHHHHhhhhhhccC Confidence 24444444443 666666 No 10 >protein:vir:741 Length: 110 # NCBI annotation: unknown # Family: family:all:372 # MgeID: mge:14 # MgeName: Tuc2009 # Cross-refs: genbank:acc:NP_108718;genbank:gi:13487840;genbank:GeneID:920873 Probab=74.12 E-value=0.048 Score=27.81 Aligned_cols=81 Identities=20% Similarity=0.244 Sum_probs=48.7 Q ss_pred cCC----hhhccCCCcccCCHHHHHHHHHHHHHHHHHHhccc---------------------cccc-ccccceeeecce Q lcl|NC_015253. 188 LLP----PERLGVSREWEMHPDLLFLILKASAIHVLEVWGRL---------------------IIGP-GIASSTLDIDGI 241 (285) Q Consensus 188 ~~~----~~r~g~~~~~evp~dL~~~I~K~a~i~Vl~~wG~l---------------------iIGA-GIAs~S~svDgi 241 (285) |.- -.|.|.+. -+|.+++++.|...|+...|.- .+|+ |.+|+| .+|+ T Consensus 1 M~~L~~vK~~lgi~~-----D~lL~~li~~a~~~i~~~l~~~~~~iP~~l~~iv~evav~ryNR~g~EG~~S~S--eeG~ 73 (110) T protein:vir:74 1 MAITYEIKKLLGGSS-----DERLEIIEKRTRERLLLILGSDLKEVPPELEYVVLDVSLKRFNRIGQEGMQSYS--QEGL 73 (110) T ss_pred ChHHHHHHHHcCCCh-----hHHHHHHHHHHHHHHHHHhCCChhhhhHHHHHHHHHHHHHHhcccCccccceee--cCCe Confidence 322 11233332 2455555555555555444411 1343 666665 5999 Q ss_pred eeecccccchhhHHHHHHHHHHHHHHHHHHHHhhhhhceeeeeC Q lcl|NC_015253. 242 MERIDTTQSAMYGGASADILQLNQDVQKLESGLKAYYAINIGII 285 (285) Q Consensus 242 seSI~TTQSA~~~g~~ArI~q~~~di~~l~~~lk~~ygin~g~i 285 (285) |-|.+ ..+-..|+++|++|.+..+..-|.++|.. T Consensus 74 S~sf~----------~~d~~~y~~~l~~y~~~~~~~~~~~~~~~ 107 (110) T protein:vir:74 74 SMTFS----------ESDFDEYADEIESRRKSKETEGDKKIGRF 107 (110) T ss_pred eeeec----------ccchhhHHHHHHHHHhhccccccCcceee Confidence 98742 34688899999999988777778888888 No 11 >protein:vir:3970 Length: 110 # NCBI annotation: hypothetical protein # Family: family:all:372 # MgeID: mge:83 # MgeName: ul36 # Cross-refs: genbank:acc:NP_663678;genbank:gi:21716115;genbank:GeneID:951203 Probab=57.38 E-value=0.18 Score=24.64 Aligned_cols=81 Identities=19% Similarity=0.224 Sum_probs=44.2 Q ss_pred cCC----hhhccCCCcccCCHHHHHHHHHHHHHHHHHHhccc---------------------cccc-ccccceeeecce Q lcl|NC_015253. 188 LLP----PERLGVSREWEMHPDLLFLILKASAIHVLEVWGRL---------------------IIGP-GIASSTLDIDGI 241 (285) Q Consensus 188 ~~~----~~r~g~~~~~evp~dL~~~I~K~a~i~Vl~~wG~l---------------------iIGA-GIAs~S~svDgi 241 (285) |.- -.|.|.+ .-+|.+++++-|...|+...|+- .+|+ |.+|+| .+|+ T Consensus 1 M~iL~~vK~~lgi~-----~D~lL~~li~~a~~~i~~~l~~~~~~iP~~l~~iv~evav~ryNR~g~EG~~S~S--eeG~ 73 (110) T protein:vir:39 1 MAITDDLKKLLGGS-----SDERLEVIEKRTRERLLLILSSNIKEVPPELEYVVLDVSLKRFNRIGQEGMQSYS--QEGL 73 (110) T ss_pred CchHHHHHHhcCCC-----hhHHHHHHHHHHHHHHHHHhCCChhhhhhHHHHHHHHHHHHHhccccccccceee--cCCe Confidence 222 1112222 12344444444444444433321 1343 666665 5699 Q ss_pred eeecccccchhhHHHHHHHHHHHHHHHHHHHHhhhhhceeeeeC Q lcl|NC_015253. 242 MERIDTTQSAMYGGASADILQLNQDVQKLESGLKAYYAINIGII 285 (285) Q Consensus 242 seSI~TTQSA~~~g~~ArI~q~~~di~~l~~~lk~~ygin~g~i 285 (285) |-|.+ ..+...|+++|++|.+......+..+|-. T Consensus 74 S~sf~----------~~d~~~y~~~l~~y~~~~~~~~~~~~g~~ 107 (110) T protein:vir:39 74 SMTFS----------ESDFDEYADEIESWRKSKETEGDKKIGRF 107 (110) T ss_pred eeeec----------ccCcchhHHHHHHHhhhccccccCcceee Confidence 97743 35788899999999877655556666766 No 12 >protein:vir:9928 Length: 118 # NCBI annotation: hypothetical protein # Family: family:all:372 # MgeID: mge:178 # MgeName: 315.6 # Cross-refs: genbank:acc:NP_795690;genbank:gi:28876458;genbank:GeneID:1258013 Probab=53.31 E-value=0.4 Score=22.79 Aligned_cols=84 Identities=14% Similarity=0.149 Sum_probs=42.6 Q ss_pred cCCh-------hhccCCCcccCCHHHHHHHHHHHHHHHHHHhccc-------------------------cccc-ccccc Q lcl|NC_015253. 188 LLPP-------ERLGVSREWEMHPDLLFLILKASAIHVLEVWGRL-------------------------IIGP-GIASS 234 (285) Q Consensus 188 ~~~~-------~r~g~~~~~evp~dL~~~I~K~a~i~Vl~~wG~l-------------------------iIGA-GIAs~ 234 (285) |+-- .|.|+..+=+-.-+|.+.+++-|...|+..-|.- .+|+ |.+|+ T Consensus 1 md~~~~L~~vK~~lgI~~~D~~~D~lL~~~i~~a~~~i~~~l~~~~~~~~~eiP~~l~~iv~evav~ryNR~g~EG~~S~ 80 (118) T protein:vir:99 1 MGDKQLIDDIKLFIGISKGDGAQDELITLAIYESKERVLAKLNEYSETEITKIPDRLRFIVRDVAIKRFNRINSEGAVED 80 (118) T ss_pred CchhhHHHHHHHHhCCCCCchhhHHHHHHHHHHHHHHHHHHhccccccchhhhhHHHHHHHHHHHHHHhcCcCCccccee Confidence 4331 1234433322334444444444444444333210 2344 67665 Q ss_pred eeeecceeeecccccchhhHHHHHHHHHHHHHHHHHHHHhh-hhhceeeeeC Q lcl|NC_015253. 235 TLDIDGIMERIDTTQSAMYGGASADILQLNQDVQKLESGLK-AYYAINIGII 285 (285) Q Consensus 235 S~svDgiseSI~TTQSA~~~g~~ArI~q~~~di~~l~~~lk-~~ygin~g~i 285 (285) | .+|.|-|. ..+...|+++|++|.+... +.-|. +-+| T Consensus 81 S--eeG~S~sf-----------~~d~~ey~~~l~~~~~~~~~~~~g~-v~Fi 118 (118) T protein:vir:99 81 S--EEGKTFKW-----------DSYLKEYESTLRSAAIGKVYSGKGV-ARFI 118 (118) T ss_pred e--cCCeeeee-----------ccCchhHHHHHHHHhhhcccCcCcc-eeeC Confidence 4 66888773 3467789999999987553 44342 1234 No 13 >protein:vir:3615 Length: 110 # NCBI annotation: ORF38 # Family: family:all:372 # MgeID: mge:74 # MgeName: TP901-1 # Cross-refs: genbank:acc:NP_112701;genbank:gi:13786569;genbank:GeneID:921067 Probab=52.51 E-value=0.24 Score=24.01 Aligned_cols=101 Identities=17% Similarity=0.219 Sum_probs=44.7 Q ss_pred ccccccchhhccccccCCCcc--cccCcceE--EEEEeccCChhhccCCCc-ccCCHHHHHHHHHHHHHHHHHHhccccc Q lcl|NC_015253. 153 MDGRQPLSFFGGYSPYETGRQ--NYSSQRFK--VGYVAGLLPPERLGVSRE-WEMHPDLLFLILKASAIHVLEVWGRLII 227 (285) Q Consensus 153 ~~~~~p~~~~~g~~~~~~g~~--~~aPq~~~--vdYvAG~~~~~r~g~~~~-~evp~dL~~~I~K~a~i~Vl~~wG~liI 227 (285) |+-+.-+. ...|.. .-.--.+. .+.+--| ++++ =+||++|.-+|..+|.+.- .+ + T Consensus 1 M~~L~~vK-------~~lg~~~D~lL~~li~~a~~~i~~~-------~~~~~~eiP~~l~~iv~evav~ry-NR-----~ 60 (110) T protein:vir:36 1 MAITDDLK-------MLLGGSLDERLEVIEKRTRDRLLLI-------LGSDIKEVPPELEYVVLDVSLKRF-NR-----I 60 (110) T ss_pred ChhHHHHH-------hhcCCChhHHHHHHHHHHHHHHHHH-------hCCChhhhhhHHHHHHHHHHHHHh-cc-----c Confidence 11000000 000100 00000000 0000000 1112 1355555544444444332 21 2 Q ss_pred cc-ccccceeeecceeeecccccchhhHHHHHHHHHHHHHHHHHHHHhhhhhceeeeeC Q lcl|NC_015253. 228 GP-GIASSTLDIDGIMERIDTTQSAMYGGASADILQLNQDVQKLESGLKAYYAINIGII 285 (285) Q Consensus 228 GA-GIAs~S~svDgiseSI~TTQSA~~~g~~ArI~q~~~di~~l~~~lk~~ygin~g~i 285 (285) |+ |.+|+| .+|+|-|.. ..+...|+++|++|.+......+.++|-. T Consensus 61 g~EG~~S~S--eeG~S~sf~----------~~d~~~y~~~l~~y~~~~~~~~~~~~g~~ 107 (110) T protein:vir:36 61 GQEGMQSYS--QEGLSMTFS----------ESDFDEYADEIESWRKSRETEGDKKIGRF 107 (110) T ss_pred cccccceee--cCCceeeec----------ccCcchHHHHHHHHHhhhccccCCcceee Confidence 33 666654 569997743 34678899999999886665567777777 No 14 >protein:vir:78595 Length: 158 # NCBI annotation: BcepNY3gp07 # Family: family:all:664 # MgeID: mge:1854 # MgeName: BcepNY3 # Cross-refs: genbank:acc:YP_001294844;genbank:gi:149882907;genbank:GeneID:5291066 Probab=33.58 E-value=0.81 Score=21.08 Aligned_cols=112 Identities=12% Similarity=0.045 Sum_probs=55.4 Q ss_pred cccCCCcccccCcceEEEEEecc-CChhhc-------c--C--CCccc--CCHHHHHHHHHHHHHHHHHHhccccccccc Q lcl|NC_015253. 166 SPYETGRQNYSSQRFKVGYVAGL-LPPERL-------G--V--SREWE--MHPDLLFLILKASAIHVLEVWGRLIIGPGI 231 (285) Q Consensus 166 ~~~~~g~~~~aPq~~~vdYvAG~-~~~~r~-------g--~--~~~~e--vp~dL~~~I~K~a~i~Vl~~wG~liIGAGI 231 (285) |.+|+|...|=|..|+.+|-.=- -|.++. . + ++++. .-.+.++..+.+..-++|.-+++-..+||- T Consensus 1 ~~~~~~~v~Fd~a~FR~~fPeFa~~pd~~i~~~~~~A~~~~~~~~~~s~~~~~~~r~~ll~LltAHll~L~~~~~~~a~~ 80 (158) T protein:vir:78 1 MSTPPYRITFDPAGFIAEYPEFATVATPRLQAMFNQAQTALLDNTGGSPVTDDNVLRELFNMLVAHLLTLFGATPTSANS 80 (158) T ss_pred CCCCCceEEcChHHHHHhchhhccCCHHHHHHHHHHhhhhhcCCCccccccChhHHHHHHHHHHHHHHHHhHhhhccccC Confidence 55566667777777776553200 122210 0 0 00110 123445666666667888888776666532 Q ss_pred c----cceeeecceeeeccc---ccch-----hhHHHHHHHHHHHHHHHHHHHHhhhhhceeeeeC Q lcl|NC_015253. 232 A----SSTLDIDGIMERIDT---TQSA-----MYGGASADILQLNQDVQKLESGLKAYYAINIGII 285 (285) Q Consensus 232 A----s~S~svDgiseSI~T---TQSA-----~~~g~~ArI~q~~~di~~l~~~lk~~ygin~g~i 285 (285) + -.|-++|.+|-|.+| |+++ ..+-+|++-- .|.+... -.|-=.|-+ T Consensus 81 g~~G~isSas~G~VSVS~d~~~~t~~~~~~W~~~T~YG~~fw-------al~~~~~-~Ggy~~gg~ 138 (158) T protein:vir:78 81 RPPGRLSSAAEGTVSSSFEFKLPEGSAIAPWYNQTQYGAMFW-------MATARYR-SARYMVSGG 138 (158) T ss_pred CcccceeeeeecceEEEEeecCccccchhHHhhcCHHHHHHH-------HHHHHhc-ccccccccC Confidence 1 237889999999875 4443 2234555544 3333222 112222222 No 15 >protein:vir:106739 Length: 158 # NCBI annotation: gp08 # Family: family:all:664 # MgeID: mge:1599 # MgeName: Bcep1 # Cross-refs: genbank:acc:NP_944316;genbank:gi:38638615;genbank:GeneID:2657368 Probab=33.58 E-value=0.81 Score=21.08 Aligned_cols=112 Identities=12% Similarity=0.045 Sum_probs=55.4 Q ss_pred cccCCCcccccCcceEEEEEecc-CChhhc-------c--C--CCccc--CCHHHHHHHHHHHHHHHHHHhccccccccc Q lcl|NC_015253. 166 SPYETGRQNYSSQRFKVGYVAGL-LPPERL-------G--V--SREWE--MHPDLLFLILKASAIHVLEVWGRLIIGPGI 231 (285) Q Consensus 166 ~~~~~g~~~~aPq~~~vdYvAG~-~~~~r~-------g--~--~~~~e--vp~dL~~~I~K~a~i~Vl~~wG~liIGAGI 231 (285) |.+|+|...|=|..|+.+|-.=- -|.++. . + ++++. .-.+.++..+.+..-++|.-+++-..+||- T Consensus 1 ~~~~~~~v~Fd~a~FR~~fPeFa~~pd~~i~~~~~~A~~~~~~~~~~s~~~~~~~r~~ll~LltAHll~L~~~~~~~a~~ 80 (158) T protein:vir:10 1 MSTPPYRITFDPAGFIAEYPEFATVATPRLQAMFNQAQTALLDNTGGSPVTDDNVLRELFNMLVAHLLTLFGATPTSANS 80 (158) T ss_pred CCCCCceEEcChHHHHHhchhhccCCHHHHHHHHHHhhhhhcCCCccccccChhHHHHHHHHHHHHHHHHhHhhhccccC Confidence 55566667777777776553200 122210 0 0 00110 123445666666667888888776666532 Q ss_pred c----cceeeecceeeeccc---ccch-----hhHHHHHHHHHHHHHHHHHHHHhhhhhceeeeeC Q lcl|NC_015253. 232 A----SSTLDIDGIMERIDT---TQSA-----MYGGASADILQLNQDVQKLESGLKAYYAINIGII 285 (285) Q Consensus 232 A----s~S~svDgiseSI~T---TQSA-----~~~g~~ArI~q~~~di~~l~~~lk~~ygin~g~i 285 (285) + -.|-++|.+|-|.+| |+++ ..+-+|++-- .|.+... -.|-=.|-+ T Consensus 81 g~~G~isSas~G~VSVS~d~~~~t~~~~~~W~~~T~YG~~fw-------al~~~~~-~Ggy~~gg~ 138 (158) T protein:vir:10 81 RPPGRLSSAAEGTVSSSFEFKLPEGSAIAPWYNQTQYGAMFW-------MATARYR-SARYMVSGG 138 (158) T ss_pred CcccceeeeeecceEEEEeecCccccchhHHhhcCHHHHHHH-------HHHHHhc-ccccccccC Confidence 1 237889999999875 4443 2234555544 3333222 112222222 No 16 >protein:vir:80144 Length: 91 # NCBI annotation: hypothetical protein # Family: family:all:3227 # MgeID: mge:1877 # MgeName: bacteriophage bv1 # Cross-refs: genbank:acc:YP_001425605;genbank:gi:155042938;genbank:GeneID:5469573 Probab=28.13 E-value=1.8 Score=19.21 Aligned_cols=80 Identities=15% Similarity=0.287 Sum_probs=48.0 Q ss_pred cCHHHHHH---HhhcCccccCCCCcccCHHHHHHHHHHHHHHHHhHhCeeeccccccch---hhh----hc-CCCeeeec Q lcl|NC_015253. 29 ITADQVKA---QMFGIPVVDPNTGEELGDDYYNTAIHAVVSNIEKTLSICILPRMELEM---KDY----YA-TDNILKLR 97 (285) Q Consensus 29 ~t~d~ik~---~mfG~~~~~p~tG~~~~D~~l~~~I~~av~~~ek~Ldi~I~PR~~~E~---~Dy----y~-~D~fv~l~ 97 (285) .+.++|-+ .-.|+.- .+-|++|++.|++++.++|.+.+|+.-|.-.+.. -|| |+ +|.=+.+- T Consensus 1 md~~~il~LlK~~LGIst-------~~RD~yL~~iI~~v~~ELed~kGi~L~~~~~~h~mf~vDyAawRY~~r~~~~~mP 73 (91) T protein:vir:80 1 MDTATVVALVKERLGIRT-------TVRDTYITAIVDGVIKELEDEKGLVLDGANPYHLMFVVDYATWRYQSRDSDGAMP 73 (91) T ss_pred CchHHHHHHHHHHhcccc-------hhhhHHHHHHHHHHHHHHHhcCCceecCCChhHhhHHhhHhHhhhccCCCcccch Confidence 44455543 3346542 4679999999999999999999999987643311 255 32 22211111 Q ss_pred cccchhhhhcceecCCcc Q lcl|NC_015253. 98 KRPVLQVEQFNVQTPNMV 115 (285) Q Consensus 98 kkPi~~V~k~~l~~~~~~ 115 (285) +-==.|++++-..++|++ T Consensus 74 rhLqyRL~NliIk~rg~~ 91 (91) T protein:vir:80 74 RHLQYRLHNLMIHVGGSP 91 (91) T ss_pred HHHHHHHHhhhhcccCCC Confidence 111234566666666666 No 17 >protein:vir:3639 Length: 158 # NCBI annotation: gp08 # Family: family:all:664 # MgeID: mge:75 # MgeName: Bcep781 # Cross-refs: genbank:acc:NP_705634;genbank:gi:23752319;genbank:GeneID:955737 Probab=27.08 E-value=1.6 Score=19.39 Aligned_cols=119 Identities=8% Similarity=0.018 Sum_probs=53.1 Q ss_pred cccCCCcccccCcceEEEEEec-cCChhh-------c-c-C--CCccc--CCHHHHHHHHHHHHHHHHHHhccccccccc Q lcl|NC_015253. 166 SPYETGRQNYSSQRFKVGYVAG-LLPPER-------L-G-V--SREWE--MHPDLLFLILKASAIHVLEVWGRLIIGPGI 231 (285) Q Consensus 166 ~~~~~g~~~~aPq~~~vdYvAG-~~~~~r-------~-g-~--~~~~e--vp~dL~~~I~K~a~i~Vl~~wG~liIGAGI 231 (285) |.+|+|...|=|..|+.+|-.= =-|.++ + . + +++|- -..+.+++.+.+..-+.|.-+...+.|+.- T Consensus 1 ~~~~~~~v~Fd~a~FR~~fPeFa~~pd~~i~~~~~~A~~~~l~n~~~s~~~~~~~r~~ll~LltAHll~L~~~~~~g~~~ 80 (158) T protein:vir:36 1 MSTPPYRITFDPAGFIAEYPEFATVPTPRLQAMFNQAQAALLDNTGGSPVTDDNVLRELFNMLVAHLLTLFSAAPTSANS 80 (158) T ss_pred CCCCCceEEcChHHHHHhCcccccCCHHHHHHHHHhhhheeeCCcccccccChHHHHHHHHHHHHHHHHHhhhhhccccc Confidence 4556666666666666555320 012221 0 0 0 01111 123344555555556677777777766511 Q ss_pred ----ccceeeecceeeecccccchhhH-HHHHHHHHHHHHHHHHHHHhhhhhceeeeeC Q lcl|NC_015253. 232 ----ASSTLDIDGIMERIDTTQSAMYG-GASADILQLNQDVQKLESGLKAYYAINIGII 285 (285) Q Consensus 232 ----As~S~svDgiseSI~TTQSA~~~-g~~ArI~q~~~di~~l~~~lk~~ygin~g~i 285 (285) .-.|-|+|.+|-|.+|...+-+. .+---...|=++.-.|.+.... .|-=.|-+ T Consensus 81 g~vG~vsSas~G~VSVS~d~~~~t~~~~~~W~~~T~YG~~fw~L~~~~~~-Gg~v~Gg~ 138 (158) T protein:vir:36 81 RPPGRLSSATEGTVSSSFEYALPQGSAIAPWYNQTQYGAMFWMATAHYRS-ARYMVSGG 138 (158) T ss_pred CcccceeeeeeCceeEEeeeccccCCchhhhhhcCHHHHHHHHHHHhhCc-cccccccC Confidence 22478899999999864421111 1111122233333344443321 01111222 No 18 >protein:vir:101559 Length: 158 # NCBI annotation: gp08 # Family: family:all:664 # MgeID: mge:1477 # MgeName: Bcep43 # Cross-refs: genbank:acc:NP_958112;genbank:gi:41057658;genbank:GeneID:2716816 Probab=27.08 E-value=1.6 Score=19.39 Aligned_cols=119 Identities=8% Similarity=0.018 Sum_probs=53.1 Q ss_pred cccCCCcccccCcceEEEEEec-cCChhh-------c-c-C--CCccc--CCHHHHHHHHHHHHHHHHHHhccccccccc Q lcl|NC_015253. 166 SPYETGRQNYSSQRFKVGYVAG-LLPPER-------L-G-V--SREWE--MHPDLLFLILKASAIHVLEVWGRLIIGPGI 231 (285) Q Consensus 166 ~~~~~g~~~~aPq~~~vdYvAG-~~~~~r-------~-g-~--~~~~e--vp~dL~~~I~K~a~i~Vl~~wG~liIGAGI 231 (285) |.+|+|...|=|..|+.+|-.= =-|.++ + . + +++|- -..+.+++.+.+..-+.|.-+...+.|+.- T Consensus 1 ~~~~~~~v~Fd~a~FR~~fPeFa~~pd~~i~~~~~~A~~~~l~n~~~s~~~~~~~r~~ll~LltAHll~L~~~~~~g~~~ 80 (158) T protein:vir:10 1 MSTPPYRITFDPAGFIAEYPEFATVPTPRLQAMFNQAQAALLDNTGGSPVTDDNVLRELFNMLVAHLLTLFSAAPTSANS 80 (158) T ss_pred CCCCCceEEcChHHHHHhCcccccCCHHHHHHHHHhhhheeeCCcccccccChHHHHHHHHHHHHHHHHHhhhhhccccc Confidence 4556666666666666555320 012221 0 0 0 01111 123344555555556677777777766511 Q ss_pred ----ccceeeecceeeecccccchhhH-HHHHHHHHHHHHHHHHHHHhhhhhceeeeeC Q lcl|NC_015253. 232 ----ASSTLDIDGIMERIDTTQSAMYG-GASADILQLNQDVQKLESGLKAYYAINIGII 285 (285) Q Consensus 232 ----As~S~svDgiseSI~TTQSA~~~-g~~ArI~q~~~di~~l~~~lk~~ygin~g~i 285 (285) .-.|-|+|.+|-|.+|...+-+. .+---...|=++.-.|.+.... .|-=.|-+ T Consensus 81 g~vG~vsSas~G~VSVS~d~~~~t~~~~~~W~~~T~YG~~fw~L~~~~~~-Gg~v~Gg~ 138 (158) T protein:vir:10 81 RPPGRLSSATEGTVSSSFEYALPQGSAIAPWYNQTQYGAMFWMATAHYRS-ARYMVSGG 138 (158) T ss_pred CcccceeeeeeCceeEEeeeccccCCchhhhhhcCHHHHHHHHHHHhhCc-cccccccC Confidence 22478899999999864421111 1111122233333344443321 01111222 No 19 >protein:vir:100211 Length: 114 # NCBI annotation: Hypothetical protein # Family: family:all:6491 # MgeID: mge:1524 # MgeName: phi AT3 # Cross-refs: genbank:acc:YP_025032;genbank:gi:48697265;genbank:GeneID:2948309 Probab=23.67 E-value=1.7 Score=19.25 Aligned_cols=101 Identities=15% Similarity=0.174 Sum_probs=51.5 Q ss_pred cccccCcccccCHHHHHHHhhcCccccCCCCcccCHHHHHHHHHHHHHHHHhHhCeeeccccccch------------hh Q lcl|NC_015253. 19 VDKMTLKDYGITADQVKAQMFGIPVVDPNTGEELGDDYYNTAIHAVVSNIEKTLSICILPRMELEM------------KD 86 (285) Q Consensus 19 ~~~~~~~d~G~t~d~ik~~mfG~~~~~p~tG~~~~D~~l~~~I~~av~~~ek~Ldi~I~PR~~~E~------------~D 86 (285) .-..|.+.=|.|-|++|+|+. .|- ..+|+.++.+|++|...++..++-.+-+...+.. |- T Consensus 1 ~~~~~~~~~~vtLeevK~~LR----ID~----ddDD~lI~~lI~aA~~yI~~aig~~~~~~~~~~~~~~~~Avl~Lv~~~ 72 (114) T protein:vir:10 1 MADETADTVGVTADDMQSYLN----LDS----DGDASILEGLISTAESAVMNAIDDTIAVEVYRTYPLFNQAVRVLVDFM 72 (114) T ss_pred CCCcccccccccHHHHHHHhC----CCC----ccchHHHHHHHHHHHHHHHHhhCCCCCcccccCchhHHHHHHHHHHHH Confidence 334468888999999999986 221 3489999999999999999999865544322211 12 Q ss_pred hhcCCCe-eeeccccchhhhhcceecCCccceecChhheeecccccccccccchhhhhhccccccccccc Q lcl|NC_015253. 87 YYATDNI-LKLRKRPVLQVEQFNVQTPNMVSVNYPDNWWRVSCLSGSLEIQPSVGALTQTTRYPYGDMDG 155 (285) Q Consensus 87 yy~~D~f-v~l~kkPi~~V~k~~l~~~~~~~~~~P~~w~kv~~l~g~iq~~pt~~~l~~~~~~~~~~~~~ 155 (285) |.++..- ....+-|. -|..+-.++. +.|..|| .++ +++..| T Consensus 73 YeNR~~~~~~~~~vp~-~v~slI~qLR----~~~~~d~---------------------~~~--~~~~d~ 114 (114) T protein:vir:10 73 YYSRGTLSDQSKAYPP-SYAYMINSIR----WKIQRDQ---------------------AAK--AGGNDG 114 (114) T ss_pred HhhhhhhccccccccH-HHHHHHHHHH----HHhhhhh---------------------hhh--ccCCCC Confidence 2223210 11222221 1222211111 1111221 111 122222 No 20 >protein:vir:95774 Length: 115 # NCBI annotation: hypothetical protein # Family: family:all:372 # MgeID: mge:1578 # MgeName: SMP # Cross-refs: genbank:acc:YP_950592;genbank:gi:119953787;genbank:GeneID:5076844 Probab=23.30 E-value=2.3 Score=18.57 Aligned_cols=88 Identities=14% Similarity=0.055 Sum_probs=40.0 Q ss_pred cCCh------hhccCCCcccCCHHHHHHHHHHHHHHHHHHhccc-------------------cccc-ccccceeeecce Q lcl|NC_015253. 188 LLPP------ERLGVSREWEMHPDLLFLILKASAIHVLEVWGRL-------------------IIGP-GIASSTLDIDGI 241 (285) Q Consensus 188 ~~~~------~r~g~~~~~evp~dL~~~I~K~a~i~Vl~~wG~l-------------------iIGA-GIAs~S~svDgi 241 (285) |+-- -|.|+..+=+..-+|.+.|++-|..+|+...|.- .+|+ |++|+|. +|. T Consensus 1 md~~~L~~vK~~LgI~~~D~~~D~lL~~ii~~a~~~i~~~l~~~~iP~~L~~Iv~ev~vkryNR~g~EG~~S~S~--eG~ 78 (115) T protein:vir:95 1 MDTTQLEKIKRRLGIPADDDKEDKLLEDLVEDAETYFKLLTSSAVVDSKYHFMIEAVVYKLYGRKGSEGVTSETV--DGY 78 (115) T ss_pred CchhHHHHHHHHhCCCCCCchhhHHHHHHHHHHHHHHHHhcCchhcchhHHHHHHHHHHHHhcCCCccccceeec--Cce Confidence 3331 1123321111233344444444333333332221 2355 7777765 898 Q ss_pred eeecccccchhhHHHHHHHHHHHHHHHHHHHHhhhhhce-eeeeC Q lcl|NC_015253. 242 MERIDTTQSAMYGGASADILQLNQDVQKLESGLKAYYAI-NIGII 285 (285) Q Consensus 242 seSI~TTQSA~~~g~~ArI~q~~~di~~l~~~lk~~ygi-n~g~i 285 (285) |-|..+. =.+...|.++|+.|.+..+..-+. -+-+| T Consensus 79 S~tf~~n--------D~~f~eY~~~l~~~~~~~~~~~~~G~v~Fl 115 (115) T protein:vir:95 79 SVTYQEW--------DNLFKPYMAILNKDFGLDGSVREKGKVMFL 115 (115) T ss_pred eeecccc--------ccccchhHHHHHHHHhccCCccCCcceeeC Confidence 8553111 123777889999988755533211 12223 No 21 >protein:vir:9877 Length: 114 # NCBI annotation: hypothetical protein # Family: family:all:2716 # MgeID: mge:177 # MgeName: 315.5 # Cross-refs: genbank:acc:NP_795639;genbank:gi:28876402;genbank:GeneID:1257933 Probab=21.92 E-value=2.5 Score=18.38 Aligned_cols=84 Identities=11% Similarity=0.132 Sum_probs=47.5 Q ss_pred cCChh---------hccCCCcccCCHHHHHHHHHHHHHHHHHHhcccc-------------------ccc-ccccceeee Q lcl|NC_015253. 188 LLPPE---------RLGVSREWEMHPDLLFLILKASAIHVLEVWGRLI-------------------IGP-GIASSTLDI 238 (285) Q Consensus 188 ~~~~~---------r~g~~~~~evp~dL~~~I~K~a~i~Vl~~wG~li-------------------IGA-GIAs~S~sv 238 (285) |+-.+ |.|++. +.+-+|.++|++-|..+|+--.|.-- +|+ |.+|+| . T Consensus 1 m~~~~~~~L~~vK~~Lgi~d--~~~D~lL~~ii~~~~~~i~~~l~~~~iP~~L~~Iv~ev~vkryNR~g~EG~~S~S--~ 76 (114) T protein:vir:98 1 MDETKQAIIDRVRVRLADET--SLKEELLEELTQTAIDRINLKVGDVVFNPLFNSIAVDVVVKMYRRMYFEGIDTEK--A 76 (114) T ss_pred CchhHHHHHHHHHHHhCCCC--CchhhHHHHHHHHHHHHHHHhhCccccchHHHHHHHHHHHHHhcccCccccceee--c Confidence 54432 234421 13455666666665555554444221 232 777774 5 Q ss_pred cceeeecccccchhhHHHHHHHHHHHHHHHHHHHHhh-hhhceeeeeC Q lcl|NC_015253. 239 DGIMERIDTTQSAMYGGASADILQLNQDVQKLESGLK-AYYAINIGII 285 (285) Q Consensus 239 DgiseSI~TTQSA~~~g~~ArI~q~~~di~~l~~~lk-~~ygin~g~i 285 (285) +|.|-|.+ .-+..-|+++|++|.+..+ ..-|.-+=+| T Consensus 77 eG~S~tf~----------dndf~ey~~~l~~y~~~~~~~~~g~~v~Fl 114 (114) T protein:vir:98 77 DTISTKFI----------ENVLAEYGEELASYKKDRLAILNKKVVRFL 114 (114) T ss_pred cceeeeee----------ccccchhHHHHHHHHhhhhhhhcCceeecC Confidence 88886643 3467788999999988665 3345334455 No 22 >protein:vir:100245 Length: 113 # NCBI annotation: gp74 # Family: family:all:363 # MgeID: mge:1619 # MgeName: Bcep176 # Cross-refs: genbank:acc:YP_355410;genbank:gi:77864700;genbank:GeneID:3725967 Probab=20.56 E-value=1.2 Score=20.14 Aligned_cols=104 Identities=11% Similarity=0.111 Sum_probs=41.1 Q ss_pred cc-cCHHHHHHHhhcCccccCCCCcccCHHHHHHHHHHHHHHHHhHhCeeeccccccchh-----hhhcCC-Ceeeeccc Q lcl|NC_015253. 27 YG-ITADQVKAQMFGIPVVDPNTGEELGDDYYNTAIHAVVSNIEKTLSICILPRMELEMK-----DYYATD-NILKLRKR 99 (285) Q Consensus 27 ~G-~t~d~ik~~mfG~~~~~p~tG~~~~D~~l~~~I~~av~~~ek~Ldi~I~PR~~~E~~-----Dyy~~D-~fv~l~kk 99 (285) +- .|-+++|+++. .|.+ .+|++++.+|++|...+|+.++-.+.+.-.+.-. +.-.+. .+-...|- T Consensus 1 M~~vtLee~K~hLR----vd~d----~dD~lI~~li~AA~~~ve~~l~r~l~~~~~~~~~~~~~~~~~~~~~~~p~~i~~ 72 (113) T protein:vir:10 1 MALVELKLALGFVR----ANAG----VEDDVVQMLLDAATQSAVDYLNRQVFETEDAMTTAIEAGTAGQNPMVVNAAIRA 72 (113) T ss_pred CCCCCHHHHHHHcC----CCCC----cchHHHHHHHHHHHHHHHHHhCccccccccccccccccccccccccccChHHHH Confidence 55 38899999987 2322 3899999999999999999998766543221000 000000 00000000 Q ss_pred cchhhhhcceecCCccceecChhheeecccccccccccch--hhhhhccccccccccccccchhhccc Q lcl|NC_015253. 100 PVLQVEQFNVQTPNMVSVNYPDNWWRVSCLSGSLEIQPSV--GALTQTTRYPYGDMDGRQPLSFFGGY 165 (285) Q Consensus 100 Pi~~V~k~~l~~~~~~~~~~P~~w~kv~~l~g~iq~~pt~--~~l~~~~~~~~~~~~~~~p~~~~~g~ 165 (285) =++-+ +.--|-+|.-..- |.+.-.|.+ -++ .|.+-+-|- T Consensus 73 AvLll--v~~~Y~nRe~~~~-----------~~~~~lP~~v~~Ll--------------~~yR~~~g~ 113 (113) T protein:vir:10 73 AILKI--TAELYANREDTAF-----------GPITELPLNARALL--------------RPHRIIPGV 113 (113) T ss_pred HHHHH--HHHHHhhhhhhch-----------hhhhccCHHHHHHH--------------HHhhhhcCC Confidence 00000 0000100100000 000001110 001 011111111 Done!