Query lcl|NC_013936.1_cdsid_YP_003495150.1 [gene=Ardmore_8] [protein=gp8] [protein_id=YP_003495150.1] [location=6446..6778] Match_columns 110 No_of_seqs 3 out of 8 Neff 1.9 Searched_HMMs 1612 Date Thu Nov 7 13:40:56 2013 Command /home/guerois/workspace/virfam/python/lib/hhsearch//hhsearch2 -i .//seq/seq_8 -d /home/guerois/workspace/virfam/python/profile_database/capsid_neck_tail.hhm -glob -cpu 7 -o .//seq/HHR/seq_8_vs_rec_db.hhr No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM 1 protein:vir:7992 Length: 109 # 100.0 2.9E-59 1.8E-62 341.5 8.4 109 1-109 1-109 (109) 2 protein:vir:102607 Length: 109 100.0 3.2E-59 2E-62 341.3 8.5 109 1-109 1-109 (109) 3 protein:vir:105824 Length: 109 100.0 3.2E-59 2E-62 341.3 8.5 109 1-109 1-109 (109) 4 protein:vir:99923 Length: 118 95.7 8.6E-05 5.3E-08 42.9 6.3 107 1-110 3-114 (118) 5 protein:vir:8190 Length: 117 # 94.9 0.00041 2.6E-07 39.1 7.6 109 1-110 1-116 (117) 6 protein:vir:2506 Length: 116 # 93.5 0.00074 4.6E-07 37.8 6.0 105 2-110 1-110 (116) 7 protein:vir:107716 Length: 132 79.7 0.014 8.5E-06 30.8 3.8 107 1-110 1-126 (132) 8 protein:vir:99571 Length: 131 73.3 0.042 2.6E-05 28.1 4.7 105 1-110 1-124 (131) 9 protein:vir:81216 Length: 118 69.1 0.079 4.9E-05 26.6 5.2 103 1-110 3-117 (118) 10 protein:vir:96107 Length: 133 64.4 0.085 5.3E-05 26.4 4.4 105 1-110 1-124 (133) No 1 >protein:vir:7992 Length: 109 # NCBI annotation: gp8 # Family: family:all:6972 # MgeID: mge:151 # MgeName: Che8 # Cross-refs: genbank:acc:NP_817346;genbank:gi:29565774;genbank:GeneID:1259001 Probab=100.00 E-value=2.9e-59 Score=341.48 Aligned_cols=109 Identities=77% Similarity=1.322 Sum_probs=108.9 Q ss_pred CcccceeeeeeeeeccccccccCCccceecCCcceeeeeecccceeeecCCcceeeeeeeeeeccCCCceeeeehhhhcc Q lcl|NC_013936. 1 MTFPVSFTVTHYPHVGDDSDGLGNTIPVFGPGVPVGAIQLAPHVQVVGSATMTETEVVDVDLYLPVGSPVAVKDRVEFGA 80 (110) Q Consensus 1 mtFp~r~~Vth~P~vG~~~D~lgN~~pVFGp~V~i~a~~~aph~~~~~~aght~r~v~~vDl~mP~~~pv~v~d~~efg~ 80 (110) ||||.+++||||||+|++||+|||++|+|||+|+++|||||||+|++++++|++|++++||||||.+|||.|+||++||+ T Consensus 1 mtfp~~~tVT~~P~~G~~sD~LGN~vP~FGp~V~v~a~q~APHvq~~~t~~~te~e~~dVDL~lPp~spV~v~~R~g~~~ 80 (109) T protein:vir:79 1 MTFPTAYTVTHYPHVGDSSDGLGNTVPQFGSGVSVPVIQLAPHVQVVGTYSIVETETIDVDLYLPPGSPVKVKDRVGYGP 80 (109) T ss_pred CcccceeeEeeccccccccccccccCccccCCCccceeeecCceeeeeccccceeeeEEEEeecCCCCchhhhhhcccCC Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred ceeeeeeeecccccccccCCceeEEeeec Q lcl|NC_013936. 81 DVFDVVAVRDWTLGFHGWAPGLVAELRKA 109 (110) Q Consensus 81 ~~yeVv~vRD~t~GfHGW~PG~vvELkr~ 109 (110) ++||||++|||++|||||+||+|+||||. T Consensus 81 ~~fdVV~~RD~t~GFHGW~PGlvaELrkv 109 (109) T protein:vir:79 81 DVFDVVAVRDWNMGFHGWAPGLVAELRKV 109 (109) T ss_pred ceEEEEEeeeccCcccccCcceeeeeecC Confidence 99999999999999999999999999999 No 2 >protein:vir:102607 Length: 109 # NCBI annotation: gp8 # Family: family:all:6972 # MgeID: mge:1661 # MgeName: Llij # Cross-refs: genbank:acc:YP_655004;genbank:gi:109392194;genbank:GeneID:4157229 Probab=100.00 E-value=3.2e-59 Score=341.28 Aligned_cols=109 Identities=76% Similarity=1.322 Sum_probs=108.9 Q ss_pred CcccceeeeeeeeeccccccccCCccceecCCcceeeeeecccceeeecCCcceeeeeeeeeeccCCCceeeeehhhhcc Q lcl|NC_013936. 1 MTFPVSFTVTHYPHVGDDSDGLGNTIPVFGPGVPVGAIQLAPHVQVVGSATMTETEVVDVDLYLPVGSPVAVKDRVEFGA 80 (110) Q Consensus 1 mtFp~r~~Vth~P~vG~~~D~lgN~~pVFGp~V~i~a~~~aph~~~~~~aght~r~v~~vDl~mP~~~pv~v~d~~efg~ 80 (110) ||||.+++||||||+|++||+|||++|+|||+|+++|||||||+|++++++|++|++++||||||.+|||.|+||++||+ T Consensus 1 mtfp~~~tVT~~P~vG~~~D~LGN~vP~FGp~V~v~a~q~APHvqv~~t~~~te~e~~dVDL~lPp~spV~v~dR~g~~~ 80 (109) T protein:vir:10 1 MTFPTAYTVTHYPHVGDSTDGLGNTVPQFGAGVSVPVIQLAPHVQVVGTYSIVETETIDVDLYLPPGSPVKVKDRVGYGS 80 (109) T ss_pred CcccceeeEeecccccccccccCCccccccCCCccceeeecCceeeeeccccceeeeEEEEeecCCCCchhhhhhcccCc Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred ceeeeeeeecccccccccCCceeEEeeec Q lcl|NC_013936. 81 DVFDVVAVRDWTLGFHGWAPGLVAELRKA 109 (110) Q Consensus 81 ~~yeVv~vRD~t~GfHGW~PG~vvELkr~ 109 (110) ++||||++|||++|||||+||+|+||||. T Consensus 81 ~vfdVV~~RD~t~GFHGW~PGlvaELrkv 109 (109) T protein:vir:10 81 DVFDVVAVRDWNMGFHGWAPGLVAELRKV 109 (109) T ss_pred eeEEEEEeeeccCcccccCcceeeeeecC Confidence 99999999999999999999999999999 No 3 >protein:vir:105824 Length: 109 # NCBI annotation: gp8 # Family: family:all:6972 # MgeID: mge:1636 # MgeName: PMC # Cross-refs: genbank:acc:YP_655769;genbank:gi:109522092;genbank:GeneID:4157632 Probab=100.00 E-value=3.2e-59 Score=341.28 Aligned_cols=109 Identities=76% Similarity=1.322 Sum_probs=108.9 Q ss_pred CcccceeeeeeeeeccccccccCCccceecCCcceeeeeecccceeeecCCcceeeeeeeeeeccCCCceeeeehhhhcc Q lcl|NC_013936. 1 MTFPVSFTVTHYPHVGDDSDGLGNTIPVFGPGVPVGAIQLAPHVQVVGSATMTETEVVDVDLYLPVGSPVAVKDRVEFGA 80 (110) Q Consensus 1 mtFp~r~~Vth~P~vG~~~D~lgN~~pVFGp~V~i~a~~~aph~~~~~~aght~r~v~~vDl~mP~~~pv~v~d~~efg~ 80 (110) ||||.+++||||||+|++||+|||++|+|||+|+++|||||||+|++++++|++|++++||||||.+|||.|+||++||+ T Consensus 1 mtfp~~~tVT~~P~vG~~~D~LGN~vP~FGp~V~v~a~q~APHvqv~~t~~~te~e~~dVDL~lPp~spV~v~dR~g~~~ 80 (109) T protein:vir:10 1 MTFPTAYTVTHYPHVGDSTDGLGNTVPQFGAGVSVPVIQLAPHVQVVGTYSIVETETIDVDLYLPPGSPVKVKDRVGYGS 80 (109) T ss_pred CcccceeeEeecccccccccccCCccccccCCCccceeeecCceeeeeccccceeeeEEEEeecCCCCchhhhhhcccCc Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred ceeeeeeeecccccccccCCceeEEeeec Q lcl|NC_013936. 81 DVFDVVAVRDWTLGFHGWAPGLVAELRKA 109 (110) Q Consensus 81 ~~yeVv~vRD~t~GfHGW~PG~vvELkr~ 109 (110) ++||||++|||++|||||+||+|+||||. T Consensus 81 ~vfdVV~~RD~t~GFHGW~PGlvaELrkv 109 (109) T protein:vir:10 81 DVFDVVAVRDWNMGFHGWAPGLVAELRKV 109 (109) T ss_pred eeEEEEEeeeccCcccccCcceeeeeecC Confidence 99999999999999999999999999999 No 4 >protein:vir:99923 Length: 118 # NCBI annotation: gp10 # Family: family:all:7208 # MgeID: mge:1611 # MgeName: Halo # Cross-refs: genbank:acc:YP_655527;genbank:gi:109392297;genbank:GeneID:4157092 Probab=95.70 E-value=8.6e-05 Score=42.89 Aligned_cols=107 Identities=23% Similarity=0.373 Sum_probs=74.2 Q ss_pred CcccceeeeeeeeeccccccccCCccceecCCcc--eeeeeecccceeeecCCcc-eeeeeeeeeeccCCCceeeeehhh Q lcl|NC_013936. 1 MTFPVSFTVTHYPHVGDDSDGLGNTIPVFGPGVP--VGAIQLAPHVQVVGSATMT-ETEVVDVDLYLPVGSPVAVKDRVE 77 (110) Q Consensus 1 mtFp~r~~Vth~P~vG~~~D~lgN~~pVFGp~V~--i~a~~~aph~~~~~~aght-~r~v~~vDl~mP~~~pv~v~d~~e 77 (110) |+||--|+|+|.-++-.-..-+|..+ .|+|++ --+-|+-|++.+.+.+.-- .|.|.++-.+-|- |--+-.|+++ T Consensus 3 ~~~P~P~eV~H~tr~KvG~n~aGQak--~~EP~~R~R~V~~~~p~~ne~~~aAala~r~vtE~~M~T~~-~DW~~~~~V~ 79 (118) T protein:vir:99 3 FQIPEPFEVTHWTRPKIGTTPAGQTK--YGEPVPRNRTVRGFEPAGEQEIRTAQLAGRQVTELVMLTAH-GDWPADSEVE 79 (118) T ss_pred ccCCCCeeeeeeeeeeecCCcccccc--ccCCcccccccccccccccccccchhhcCceeeeeeeeccc-CCCCccccee Confidence 99999999999866655555666664 355553 3567888888887765543 4566666555553 2223334443 Q ss_pred hc-cceeeeee-eecccccccccCCceeEEeeecC Q lcl|NC_013936. 78 FG-ADVFDVVA-VRDWTLGFHGWAPGLVAELRKAA 110 (110) Q Consensus 78 fg-~~~yeVv~-vRD~t~GfHGW~PG~vvELkr~~ 110 (110) -. +.-|+|-+ ||||.+|=-|.+||--|.|||.- T Consensus 80 ~w~GR~FkV~G~V~DYNlGPF~F~PGY~V~LRrVn 114 (118) T protein:vir:99 80 LWDGRRFEVNGPVRDYNLGPFDFEPGYAVDLRRVN 114 (118) T ss_pred eccCcEEEecCCccccccCCCCCCCCeeEEEeecc Confidence 32 33667765 89999999999999999999987 No 5 >protein:vir:8190 Length: 117 # NCBI annotation: gp10 # Family: family:all:7208 # MgeID: mge:153 # MgeName: Che9d # Cross-refs: genbank:acc:NP_817983;genbank:gi:29566417;genbank:GeneID:2700971 Probab=94.91 E-value=0.00041 Score=39.13 Aligned_cols=109 Identities=24% Similarity=0.367 Sum_probs=84.6 Q ss_pred CcccceeeeeeeeeccccccccCCccceecCC-----cceeeeeec-ccceeeecCCcceeeeeeeeeeccCCCceeeee Q lcl|NC_013936. 1 MTFPVSFTVTHYPHVGDDSDGLGNTIPVFGPG-----VPVGAIQLA-PHVQVVGSATMTETEVVDVDLYLPVGSPVAVKD 74 (110) Q Consensus 1 mtFp~r~~Vth~P~vG~~~D~lgN~~pVFGp~-----V~i~a~~~a-ph~~~~~~aght~r~v~~vDl~mP~~~pv~v~d 74 (110) |.||.-|+|----|--.-.|+.|.+-|.+-|+ -+-++-+|. |...+..+|||..-+| .+.|..|.--.-+-.| T Consensus 1 mrfptpftvgvhsysesgeddygrdepmwtppkdepgtpqavhgwsspsstepklaghdrvev-hiellvppefstgphd 79 (117) T protein:vir:81 1 MRFPTPFTVGVHSYSESGEDDYGRDEPMWTPPKDEPGTPQAVHGWSSPSSTEPKLAGHDRVEV-HIELLVPPEFSTGPHD 79 (117) T ss_pred CCCCCceeeeeecccccCccccccCCCccCCCCCCCCCcceeeccCCCCccCccccccceeEE-EEEEeecCCcCCCccc Confidence 99999999988788888889999999999765 457888886 4555667899976554 5778888644445556 Q ss_pred hhhhccceeeeeee-ecccccccccCCceeEEeeecC Q lcl|NC_013936. 75 RVEFGADVFDVVAV-RDWTLGFHGWAPGLVAELRKAA 110 (110) Q Consensus 75 ~~efg~~~yeVv~v-RD~t~GfHGW~PG~vvELkr~~ 110 (110) -...-+--|||++- .|.|+.=-|=--|-||.|||.. T Consensus 80 vidlegvqyevigypedftgspfggvggkvvnlrrve 116 (117) T protein:vir:81 80 VIDLEGVQYEVIGYPEDFTGSPFGGVGGKVVNLRRVE 116 (117) T ss_pred eeecccceeeEeecCcccCCCcccccCceeeeeeeec Confidence 66666778999985 4666665666779999999999 No 6 >protein:vir:2506 Length: 116 # NCBI annotation: hypothetical protein # Family: family:all:7208 # MgeID: mge:53 # MgeName: TM4 # Cross-refs: genbank:acc:NP_569747;genbank:gi:18496897;genbank:GeneID:932259 Probab=93.47 E-value=0.00074 Score=37.75 Aligned_cols=105 Identities=25% Similarity=0.386 Sum_probs=73.8 Q ss_pred cccceeeeeeeeeccccccccCCccceecCCcc--eeeeeecccceeeecCCcc-eeeeeeeeeeccCCCceeeeehhhh Q lcl|NC_013936. 2 TFPVSFTVTHYPHVGDDSDGLGNTIPVFGPGVP--VGAIQLAPHVQVVGSATMT-ETEVVDVDLYLPVGSPVAVKDRVEF 78 (110) Q Consensus 2 tFp~r~~Vth~P~vG~~~D~lgN~~pVFGp~V~--i~a~~~aph~~~~~~aght-~r~v~~vDl~mP~~~pv~v~d~~ef 78 (110) .||--|+|+|.-++-.-..-+|.. .|+|++ --+-|+-|++.+.+.+.-- .|.|.+.-.+-|- |--+-.|+++- T Consensus 1 ~~P~P~eV~H~tr~KvG~n~aGQa---~~EP~~R~R~V~~~~p~~ne~~~aAala~r~vtE~tM~T~~-~DW~~~d~V~~ 76 (116) T protein:vir:25 1 MFPTPHKVVHVDRVKVGENAMGQA---ITEPRTRTRWVTSLRPRVNESGTAAALADRVITEYTMATPE-SDWTHGDQVTD 76 (116) T ss_pred CCCCCeeeeeeeeeeecCCccccc---ccCCccCcccccccccccccccchhhhcCceeeeeeeeccc-CCCCcccceec Confidence 899999999987665555566666 577665 3577888988888766544 4566666555553 22233344433 Q ss_pred c-cceeeeee-eecccccccccCCceeEEeeecC Q lcl|NC_013936. 79 G-ADVFDVVA-VRDWTLGFHGWAPGLVAELRKAA 110 (110) Q Consensus 79 g-~~~yeVv~-vRD~t~GfHGW~PG~vvELkr~~ 110 (110) . +.-|+|-+ ||||.+|=-|.+||-.|.|||.- T Consensus 77 w~GR~FkV~G~V~DYNlGPF~F~PGY~V~LRrVn 110 (116) T protein:vir:25 77 ARGRKFKVHGDVEDYNLGPFGFTPGYRVTLRRVN 110 (116) T ss_pred ccCcEEEecCCccccccCCCCCCCCeeeeeeecc Confidence 2 33677765 89999999999999999999976 No 7 >protein:vir:107716 Length: 132 # NCBI annotation: gp19 # Family: family:all:7161 # MgeID: mge:1520 # MgeName: BcepB1A # Cross-refs: genbank:acc:YP_024867;genbank:gi:48697509;genbank:GeneID:2948332 Probab=79.71 E-value=0.014 Score=30.80 Aligned_cols=107 Identities=19% Similarity=0.311 Sum_probs=77.8 Q ss_pred Cccc------------ceeeeeeeeeccccccccCCccceecCCcce--eeeeecccceeeecCCcceeeeeeeeeeccC Q lcl|NC_013936. 1 MTFP------------VSFTVTHYPHVGDDSDGLGNTIPVFGPGVPV--GAIQLAPHVQVVGSATMTETEVVDVDLYLPV 66 (110) Q Consensus 1 mtFp------------~r~~Vth~P~vG~~~D~lgN~~pVFGp~V~i--~a~~~aph~~~~~~aght~r~v~~vDl~mP~ 66 (110) |.-| ..-+|-++-+.|-+++.-||-|-+|+||++| +-.|=+++-+....-=-+++.-.+ |+-|- T Consensus 1 m~iPG~NLl~~A~~vI~~q~V~y~rf~~Rt~n~~gq~i~~y~~p~~i~~gS~Q~V~~~~v~~~GLd~~~~Yv~--lf~s~ 78 (132) T protein:vir:10 1 MSVPGLNLLAMALGLIASETVEYFAETGRTKQPNGVFIASYASPVPIEECSVQAVDRSKYTDLGLDFQKTYVT--WFVPN 78 (132) T ss_pred CcccchhHHHHHhhhhccccchhhcccccccccccceeeeecCCcccccceeeecChhhheecccceeeeeee--Eeecc Confidence 4444 4568888889999999999999999999999 566667775555444344444333 34332 Q ss_pred CCceee-----eehhhhccceeeeeeeecccccccccCCceeEEeeecC Q lcl|NC_013936. 67 GSPVAV-----KDRVEFGADVFDVVAVRDWTLGFHGWAPGLVAELRKAA 110 (110) Q Consensus 67 ~~pv~v-----~d~~efg~~~yeVv~vRD~t~GfHGW~PG~vvELkr~~ 110 (110) -.-+++ -|++.+++..|+|.+.-||+. =.||+--+-||+--+- T Consensus 79 ~~i~~iqRg~agD~liwnGrr~~v~g~~dW~~-QDGW~~~lcv~~G~~~ 126 (132) T protein:vir:10 79 QAFTTIKRGKAGDVLEWNGGRYQMNGGIDWTG-QDSWGTATCVLIGPAT 126 (132) T ss_pred hhhhhcccCCCCCEEEECCeEEEecccceeee-eccceEEEEEEecCcc Confidence 111121 389999999999999999985 5899988888886655 No 8 >protein:vir:99571 Length: 131 # NCBI annotation: hypothetical protein # Family: family:all:7161 # MgeID: mge:1544 # MgeName: BcepF1 # Cross-refs: genbank:acc:YP_001039798;genbank:gi:126011048;genbank:GeneID:4818266 Probab=73.34 E-value=0.042 Score=28.11 Aligned_cols=105 Identities=19% Similarity=0.295 Sum_probs=73.6 Q ss_pred Cccc------------ceeeeeeeeeccccccccCCccceecCCcceeeeee--cccceeeecCCcceeeeeeeeeeccC Q lcl|NC_013936. 1 MTFP------------VSFTVTHYPHVGDDSDGLGNTIPVFGPGVPVGAIQL--APHVQVVGSATMTETEVVDVDLYLPV 66 (110) Q Consensus 1 mtFp------------~r~~Vth~P~vG~~~D~lgN~~pVFGp~V~i~a~~~--aph~~~~~~aght~r~v~~vDl~mP~ 66 (110) |--| ..-+|-++-+.+-+++.-||-|-+|+|+++| .-|| +++-+....-=-+++.-.+ |+-|- T Consensus 1 m~iPG~NLl~~A~~VI~~Q~V~y~rf~~Rt~n~~gq~i~~y~~p~~i-~gS~Q~V~~~~v~~~GLd~~~~Yv~--lfts~ 77 (131) T protein:vir:99 1 MIVPGSNLFMQAASVIALTPVPYLRFTQRVLNPARQWITTYAAAVDV-PMSVQRVPRNKYVQFGLEFQRNYVR--LFAPI 77 (131) T ss_pred CcccchHHHHHHhhhhccccchhhcccccccccccceeeeecCCccc-eeeEEecChhheeecCcceeeeEEE--EeecC Confidence 4333 4567888888899999999999999999999 4455 5553444333333443333 23221 Q ss_pred CCceee-----eehhhhccceeeeeeeecccccccccCCceeEEeeecC Q lcl|NC_013936. 67 GSPVAV-----KDRVEFGADVFDVVAVRDWTLGFHGWAPGLVAELRKAA 110 (110) Q Consensus 67 ~~pv~v-----~d~~efg~~~yeVv~vRD~t~GfHGW~PG~vvELkr~~ 110 (110) - -+++ -|++.+++..|+|.+.-||+. =.||+--+-||+.-.. T Consensus 78 ~-i~~iqRg~agD~liwnGrr~~v~g~~dW~~-QDGW~~~lcv~~Gi~~ 124 (131) T protein:vir:99 78 E-MVDLDRDCGGDMIIWHGRQHKIESQNTWYL-QDGWAMSLAVDLGIRS 124 (131) T ss_pred c-ceecccCCCCCEEEECCeEEEecccceeee-eccceEEEEEEeeccc Confidence 0 1222 388999999999999999985 5899988889987655 No 9 >protein:vir:81216 Length: 118 # NCBI annotation: gp9 # Family: family:all:10295 # MgeID: mge:1893 # MgeName: BFK20 # Cross-refs: genbank:acc:YP_001456739;genbank:gi:157168382;uniprot:Q9MBJ6;genbank:GeneID:5580339 Probab=69.11 E-value=0.079 Score=26.63 Aligned_cols=103 Identities=19% Similarity=0.217 Sum_probs=69.4 Q ss_pred CcccceeeeeeeeeccccccccCCccc-eecCCcceee---eeecccceeeecCCcceeeeeeeeeeccCCC--ceeeee Q lcl|NC_013936. 1 MTFPVSFTVTHYPHVGDDSDGLGNTIP-VFGPGVPVGA---IQLAPHVQVVGSATMTETEVVDVDLYLPVGS--PVAVKD 74 (110) Q Consensus 1 mtFp~r~~Vth~P~vG~~~D~lgN~~p-VFGp~V~i~a---~~~aph~~~~~~aght~r~v~~vDl~mP~~~--pv~v~d 74 (110) |-|--|+++-- -|..+|.-||+++ =+++++++-+ .+-.|. +.+-+..-....|++.-|+=|.|. +..-+| T Consensus 3 ~~F~~~v~ilR---a~~~~~~yg~d~~~dw~~pv~ipV~~~vSvQPv-~StE~~~~r~~vVt~w~l~~Ppg~d~~Lra~D 78 (118) T protein:vir:81 3 VIFVNAVTVLR---AREVGSVYSSEKTLTWDDPVRIDVPFLVSVQPR-GSTEGGTDRPTVVSAWWMCTPPGTDLDLRPED 78 (118) T ss_pred eeeeeeEEEec---CCccccccCCCcccccCCceeeeccCcceeeec-CccccCCCCceeeeeeEeecCCCCCcCCCccc Confidence 66777776543 4688888899886 3677776655 356674 455566666678999999999844 457789 Q ss_pred hhhhc-cceeeeeeeecccccc-cccCCcee----EEeeecC Q lcl|NC_013936. 75 RVEFG-ADVFDVVAVRDWTLGF-HGWAPGLV----AELRKAA 110 (110) Q Consensus 75 ~~efg-~~~yeVv~vRD~t~Gf-HGW~PG~v----vELkr~~ 110 (110) ++|+| +.+|||++.= +-| |=-++|.+ +-||..- T Consensus 79 RVr~a~G~~~eV~G~P---~~wp~P~~t~~v~Hvea~Levvt 117 (118) T protein:vir:81 79 RVELATGLQLEVVGQP---LRWPDPVNQDQVHHVEANLEVVD 117 (118) T ss_pred eeeeccccEEEEecCc---ccccCccccccccceeEEEEEec Confidence 99999 8999999742 122 22255433 3444444 No 10 >protein:vir:96107 Length: 133 # NCBI annotation: conserved hypothetical protein ORF026 # Family: family:all:7161 # MgeID: mge:1597 # MgeName: F8 # Cross-refs: genbank:acc:YP_001294443;genbank:gi:149408340;genbank:GeneID:5237226 Probab=64.37 E-value=0.085 Score=26.44 Aligned_cols=105 Identities=17% Similarity=0.246 Sum_probs=72.9 Q ss_pred Cccc------------ceeeeeeeeeccccccccCCccceecCCcceeeeee--cccceeeecCCcceeeeeeeeeeccC Q lcl|NC_013936. 1 MTFP------------VSFTVTHYPHVGDDSDGLGNTIPVFGPGVPVGAIQL--APHVQVVGSATMTETEVVDVDLYLPV 66 (110) Q Consensus 1 mtFp------------~r~~Vth~P~vG~~~D~lgN~~pVFGp~V~i~a~~~--aph~~~~~~aght~r~v~~vDl~mP~ 66 (110) |--| ..-+|-++-+.+-+++.-||-|-+|+|+++|. -|| +++-+....-=-+++.-.+ |+ +. T Consensus 1 m~iPG~NLl~~A~~VI~~Q~V~y~rf~~Rt~n~~gq~i~~y~~p~~i~-gS~Q~V~~~~v~~~GLd~~~~Yv~--lf-~s 76 (133) T protein:vir:96 1 MVIPGANLLRMAFSVIGTQLVQYRKFEQRTKNSQAQYVSVFGEPFQLA-ASIQRVRRDQYVQFNLEFQRNYVM--IF-AN 76 (133) T ss_pred CcccchhHHHHHhhhhccccchhhcccccccccccceeeeecCCccce-eeEEecChhheeecCcceeeeeeE--ee-cC Confidence 4433 45678888889999999999999999999995 454 5553333333233333332 23 11 Q ss_pred CCceee-----eehhhhccceeeeeeeecccccccccCCceeEEeeecC Q lcl|NC_013936. 67 GSPVAV-----KDRVEFGADVFDVVAVRDWTLGFHGWAPGLVAELRKAA 110 (110) Q Consensus 67 ~~pv~v-----~d~~efg~~~yeVv~vRD~t~GfHGW~PG~vvELkr~~ 110 (110) =+-+++ -|++.+++..|+|.+.-||+. =.||+--+-||+--+- T Consensus 77 ~~i~~iqRg~agD~liwnGrr~~v~g~~dW~~-QDGW~~~lcv~~G~~~ 124 (133) T protein:vir:96 77 FEMVDLDRDLAGDQFIWTGRVFQLESQGSWFY-QDGWGVCLAVDIGTAK 124 (133) T ss_pred cceeecccCCCCCEEEECCeEEEecccceeee-eccceEEEEEeecCCC Confidence 112222 388999999999999999985 5899988888886654 Done!