Query lcl|NC_013599.1_cdsid_YP_003344925.1 [gene=Xfas53_gene35] [protein=DNA stabilization protein] [protein_id=YP_003344925.1] [location=27007..27414] Match_columns 135 No_of_seqs 14 out of 19 Neff 3.6 Searched_HMMs 1612 Date Thu Nov 7 12:43:50 2013 Command /home/guerois/workspace/virfam/python/lib/hhsearch//hhsearch2 -i .//seq/seq_35 -d /home/guerois/workspace/virfam/python/profile_database/capsid_neck_tail.hhm -glob -cpu 7 -o .//seq/HHR/seq_35_vs_rec_db.hhr No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM 1 protein:vir:3528 Length: 160 # 100.0 9.1E-64 5.6E-67 366.2 14.1 135 1-135 4-145 (160) 2 protein:vir:105380 Length: 160 100.0 1.1E-63 7.1E-67 365.6 14.2 135 1-135 4-145 (160) 3 protein:vir:176 Length: 160 # 100.0 1.2E-63 7.3E-67 365.6 14.2 135 1-135 4-145 (160) 4 protein:vir:105524 Length: 166 100.0 4.4E-63 2.7E-66 362.5 14.1 135 1-135 4-145 (166) 5 protein:vir:100918 Length: 166 100.0 5.7E-63 3.5E-66 361.8 14.3 135 1-135 3-148 (166) 6 protein:vir:9267 Length: 166 # 100.0 7.7E-63 4.8E-66 361.1 14.4 135 1-135 3-148 (166) 7 protein:vir:2108 Length: 166 # 100.0 9.8E-62 6.1E-65 355.1 14.2 135 1-135 3-148 (166) 8 protein:vir:108311 Length: 249 99.4 1.9E-15 1.2E-18 101.3 10.9 133 1-135 2-248 (249) 9 protein:vir:101857 Length: 307 70.5 0.011 6.8E-06 31.3 0.8 120 1-135 5-130 (307) 10 protein:vir:101153 Length: 307 70.5 0.011 6.8E-06 31.3 0.8 120 1-135 5-130 (307) 11 protein:vir:81013 Length: 310 67.4 0.011 7E-06 31.2 0.2 122 1-135 6-134 (310) 12 protein:vir:6589 Length: 310 # 67.4 0.011 7E-06 31.2 0.2 122 1-135 6-134 (310) 13 protein:vir:106985 Length: 276 63.1 0.081 5.1E-05 26.6 4.0 99 1-135 4-117 (276) 14 protein:vir:6889 Length: 308 # 62.0 0.036 2.2E-05 28.5 1.9 122 1-135 6-135 (308) 15 protein:vir:107900 Length: 311 61.6 0.075 4.7E-05 26.7 3.5 118 1-135 1-135 (311) 16 protein:vir:103451 Length: 309 59.8 0.069 4.3E-05 26.9 3.0 121 1-135 6-136 (309) 17 protein:vir:100534 Length: 314 58.8 0.026 1.6E-05 29.3 0.4 117 1-135 1-130 (314) 18 protein:vir:104585 Length: 268 56.1 0.2 0.00012 24.4 4.9 98 1-135 6-109 (268) 19 protein:vir:95323 Length: 201 52.8 0.54 0.00034 22.0 9.9 125 1-135 1-197 (201) 20 protein:vir:7198 Length: 309 # 52.5 0.062 3.8E-05 27.2 1.5 111 1-135 6-136 (309) 21 protein:vir:103004 Length: 268 52.4 0.2 0.00012 24.5 4.2 94 1-135 6-128 (268) 22 protein:vir:98189 Length: 307 51.5 0.098 6E-05 26.1 2.4 117 1-135 1-129 (307) 23 protein:vir:98502 Length: 223 46.7 0.73 0.00045 21.3 10.4 135 1-135 1-223 (223) 24 protein:vir:107429 Length: 223 46.7 0.73 0.00045 21.3 10.4 135 1-135 1-223 (223) 25 protein:vir:107803 Length: 223 46.7 0.73 0.00045 21.3 10.4 135 1-135 1-223 (223) 26 protein:vir:106428 Length: 306 45.6 0.094 5.8E-05 26.2 1.3 111 1-135 7-130 (306) 27 protein:vir:104694 Length: 281 38.5 0.11 6.7E-05 25.9 0.5 120 1-135 4-146 (281) 28 protein:vir:5657 Length: 307 # 37.2 0.28 0.00018 23.6 2.6 109 1-135 6-130 (307) 29 protein:vir:103760 Length: 207 36.2 1.2 0.00074 20.2 10.6 130 1-135 1-200 (207) 30 protein:vir:7328 Length: 201 # 22.8 2.4 0.0015 18.5 9.7 125 1-135 1-197 (201) 31 protein:vir:1780 Length: 67 # 20.6 2.4 0.0015 18.5 4.6 59 1-59 6-67 (67) No 1 >protein:vir:3528 Length: 160 # NCBI annotation: P27 # Family: family:all:1693 # MgeID: mge:72 # MgeName: APSE-1 # Cross-refs: genbank:acc:NP_050988;genbank:gi:9633574;genbank:GeneID:1262321 Probab=100.00 E-value=9.1e-64 Score=366.20 Aligned_cols=135 Identities=20% Similarity=0.260 Sum_probs=131.9 Q ss_pred CchHHHHHHHHHHHhhhhc--ccCCCCHHHHHHHHHHHHHHHHhhcccccccCC-----CCCCCCCcccCCCHHHHHHHH Q lcl|NC_013599. 1 MTTVAEIIRDAFGHLRVLD--ANEAVEAEDATRAIRTLNLMMRRWEANGIALGW-----SEVASPDDLLPAPAEAEEAIG 73 (135) Q Consensus 1 mtTkgdlV~~AlrklgV~~--t~~~vepqs~~~gi~dLe~MMaeW~a~gi~iGy-----~e~~~PdDd~glp~~a~~Av~ 73 (135) ||||||||++|||||||+| ||+||||||+|+|||+||+||+||+++||++|| .|+++|||+||||++|++||+ T Consensus 4 ~~Tkgdiv~~Alrk~gvas~at~~DvePq~~e~gindLe~MMaeW~a~gi~lGy~Fa~~~e~p~pdD~~glp~~~~~aV~ 83 (160) T protein:vir:35 4 PLTKGEIVLFALRKAGIASEATNIDVEPQSFEEGINDLEDLMAELQITFGDLGYQFSAEEENPTSDDASGLPRKYKQVMG 83 (160) T ss_pred cchHHHHHHHHHHHhhccccccccCCCHHHHHHHHHHHHHHHHhhccCCceeeeeecccCCCCCcccccCCchhHHHHHH Confidence 9999999999999999999 999999999999999999999999999999999 789999999999999999999 Q ss_pred HHHHHHHhhhhCCCCCHHHHHHHHHHHHHHHHHHhhccccccCCCCCCCCCCCcccCCccCC Q lcl|NC_013599. 74 YNLAVRLRAGYGVVLEQDVLNAAERGRAMLISDTVHASGVRMQYALPAAESQRRYGSDGYDG 135 (135) Q Consensus 74 ~nLA~ria~dygie~~~~v~~~A~~~~~~L~sa~~~a~~~~~~~~mP~g~gnr~~~~~~~~~ 135 (135) |||||||||||||||+++++++|+|+|++||++++++|+++|+++||+|+||+++..+|+.- T Consensus 84 ~~LAvria~dyG~~~s~~~~a~A~~ay~~Ll~a~~~~p~~~r~~~mP~GsGN~~~a~~g~ry 145 (160) T protein:vir:35 84 YQLMLRMLSDYGIEPTPRQEASAAAAYDALLTDTLSVPSIARRGDMPVGQGNNYTALGTASY 145 (160) T ss_pred HHHHHHHHHhhCCCcCHHHHHHHHHHHHHHHHHhhccccccccCCCCcccccccccCCccee Confidence 99999999999999999999999999999999999999999999999999999998777654 No 2 >protein:vir:105380 Length: 160 # NCBI annotation: gene 7 protein # Family: family:all:1693 # MgeID: mge:1556 # MgeName: Sf6 # Cross-refs: genbank:acc:NP_958183;genbank:gi:41057285;genbank:GeneID:2716627 Probab=100.00 E-value=1.1e-63 Score=365.65 Aligned_cols=135 Identities=24% Similarity=0.351 Sum_probs=131.9 Q ss_pred CchHHHHHHHHHHHhhhhc--ccCCCCHHHHHHHHHHHHHHHHhhcccccccCC-----CCCCCCCcccCCCHHHHHHHH Q lcl|NC_013599. 1 MTTVAEIIRDAFGHLRVLD--ANEAVEAEDATRAIRTLNLMMRRWEANGIALGW-----SEVASPDDLLPAPAEAEEAIG 73 (135) Q Consensus 1 mtTkgdlV~~AlrklgV~~--t~~~vepqs~~~gi~dLe~MMaeW~a~gi~iGy-----~e~~~PdDd~glp~~a~~Av~ 73 (135) |+||||||++|||||||+| |++||||||+|+|||+||+||+||+++||+||| .|+++|||+||||++|++||+ T Consensus 4 ~~Tkgdiv~~Alrklgvas~at~~Dvepqs~~~gindLe~MMaeW~a~gi~lGy~Fa~~~e~p~pdD~~glp~~~~~aV~ 83 (160) T protein:vir:10 4 VLTKGEIVLFALRKFAIASNASLTDVEPQSIEDGVNDLEDMMSEWMINPGDIGYAFATGDEQPLPDDESGLPRKYKHAVG 83 (160) T ss_pred chhHHHHHHHHHHHhcccccccccCCChHHHHHHHHHHHHHHHHhccCCcceeeeecccCCCCCccccccCChhHHHHHH Confidence 9999999999999999999 999999999999999999999999999999999 788999999999999999999 Q ss_pred HHHHHHHhhhhCCCCCHHHHHHHHHHHHHHHHHHhhccccccCCCCCCCCCCCcccCCccCC Q lcl|NC_013599. 74 YNLAVRLRAGYGVVLEQDVLNAAERGRAMLISDTVHASGVRMQYALPAAESQRRYGSDGYDG 135 (135) Q Consensus 74 ~nLA~ria~dygie~~~~v~~~A~~~~~~L~sa~~~a~~~~~~~~mP~g~gnr~~~~~~~~~ 135 (135) |||||||||||||||+++++++|+|+|++||++++++|+++|+++||+|+||||+.++++.- T Consensus 84 ~~LAvria~dygie~s~~~~s~A~~ay~~Ll~a~~~~p~~~~~~~mP~gsGn~~~~~~~~~y 145 (160) T protein:vir:10 84 YQLLLRMLSDYSLEPTPQVLSNAQRSYDALMTDTLVVPSMRRRGDFPVGQGNKYDVFTSDRY 145 (160) T ss_pred HHHHHHHHHhcCCCcCHHHHHHHHHHHHHHHHHHhhcchhhccCCCCCCCCCcccccccccc Confidence 99999999999999999999999999999999999999999999999999999998777654 No 3 >protein:vir:176 Length: 160 # NCBI annotation: DNA stabilization protein # Family: family:all:1693 # MgeID: mge:5 # MgeName: HK620 # Cross-refs: genbank:acc:NP_112081;genbank:gi:13559871;genbank:GeneID:920968 Probab=100.00 E-value=1.2e-63 Score=365.57 Aligned_cols=135 Identities=24% Similarity=0.354 Sum_probs=131.9 Q ss_pred CchHHHHHHHHHHHhhhhc--ccCCCCHHHHHHHHHHHHHHHHhhcccccccCC-----CCCCCCCcccCCCHHHHHHHH Q lcl|NC_013599. 1 MTTVAEIIRDAFGHLRVLD--ANEAVEAEDATRAIRTLNLMMRRWEANGIALGW-----SEVASPDDLLPAPAEAEEAIG 73 (135) Q Consensus 1 mtTkgdlV~~AlrklgV~~--t~~~vepqs~~~gi~dLe~MMaeW~a~gi~iGy-----~e~~~PdDd~glp~~a~~Av~ 73 (135) |+||||||++|||||||+| |++||||||+|+|||+||+||+||+++||+||| .|+++|||+||||++|++||+ T Consensus 4 ~~Tkgdiv~~Alrklgvas~at~~Dvepqs~~~gindLe~MMaeW~a~gi~lGy~Fa~~~e~p~pdD~~glp~~~~~aV~ 83 (160) T protein:vir:17 4 VLTKGEIVLFALRKFAIASNASLTDVEPQSIEDGVNDLEDMMSEWMINPGDIGYAFATGDEQPLPDDESGLPRKYKHAVG 83 (160) T ss_pred chhHHHHHHHHHHHhcccccccccCCChHHHHHHHHHHHHHHHHhccCCcceeeeecccCCCCCccccccCChhHHHHHH Confidence 9999999999999999999 999999999999999999999999999999999 788999999999999999999 Q ss_pred HHHHHHHhhhhCCCCCHHHHHHHHHHHHHHHHHHhhccccccCCCCCCCCCCCcccCCccCC Q lcl|NC_013599. 74 YNLAVRLRAGYGVVLEQDVLNAAERGRAMLISDTVHASGVRMQYALPAAESQRRYGSDGYDG 135 (135) Q Consensus 74 ~nLA~ria~dygie~~~~v~~~A~~~~~~L~sa~~~a~~~~~~~~mP~g~gnr~~~~~~~~~ 135 (135) |||||||||||||||+++++++|+|+|++||++++++|+++|+++||+|+||||+.++++.- T Consensus 84 ~~LAvria~dygie~s~~~~s~A~~ay~~Ll~a~~~~p~~~~~~~mP~gsgn~~~~~~~~~y 145 (160) T protein:vir:17 84 YQLLLRMLSDYSLEPTPQVLSNAQRSYDALMTDTLVVPSIRRRGDFPVGQGNKYDVFTSDRY 145 (160) T ss_pred HHHHHHHHHhcCCCcCHHHHHHHHHHHHHHHHHHhhcchhhccCCCCCCCCCcccccccccc Confidence 99999999999999999999999999999999999999999999999999999998777654 No 4 >protein:vir:105524 Length: 166 # NCBI annotation: phage DNA stabilization protein # Family: family:all:1693 # MgeID: mge:1463 # MgeName: phiSG1 # Cross-refs: genbank:acc:YP_516193;genbank:gi:89885996;genbank:GeneID:3964384 Probab=100.00 E-value=4.4e-63 Score=362.45 Aligned_cols=135 Identities=22% Similarity=0.335 Sum_probs=131.7 Q ss_pred CchHHHHHHHHHHHhhhhc--ccCCCCHHHHHHHHHHHHHHHHhhcccccccCCC-----CCCCCCcccCCCHHHHHHHH Q lcl|NC_013599. 1 MTTVAEIIRDAFGHLRVLD--ANEAVEAEDATRAIRTLNLMMRRWEANGIALGWS-----EVASPDDLLPAPAEAEEAIG 73 (135) Q Consensus 1 mtTkgdlV~~AlrklgV~~--t~~~vepqs~~~gi~dLe~MMaeW~a~gi~iGy~-----e~~~PdDd~glp~~a~~Av~ 73 (135) |+||||||++|||||||+| |++||||||+|+|||+||+||+||+++||++||. |+++|||+||||++|++||+ T Consensus 4 ~~TkgeiV~~Alrklgv~s~at~~Dvepq~~~~gv~dLe~MMaeW~a~gi~lGy~Fa~~~e~p~pdD~~glp~~~~~aV~ 83 (166) T protein:vir:10 4 LLTKGDVVLFALRKCAVASNATLTDVEPQSVTDGLDDLEAMMAEWRARGIDIGYRFAQDEQTVSPDDPTGVLPLFTSAVG 83 (166) T ss_pred cchHHHHHHHHHHHhccCcchhhcCCCHHHHHHHHHHHHHHHHHhccCcceeeeeecccCCCCCccccccCchhHHHHHH Confidence 9999999999999999999 9999999999999999999999999999999994 78999999999999999999 Q ss_pred HHHHHHHhhhhCCCCCHHHHHHHHHHHHHHHHHHhhccccccCCCCCCCCCCCcccCCccCC Q lcl|NC_013599. 74 YNLAVRLRAGYGVVLEQDVLNAAERGRAMLISDTVHASGVRMQYALPAAESQRRYGSDGYDG 135 (135) Q Consensus 74 ~nLA~ria~dygie~~~~v~~~A~~~~~~L~sa~~~a~~~~~~~~mP~g~gnr~~~~~~~~~ 135 (135) |||||||||||||||+++++++|+|+|++||++++++|+++|+++||+|+||+++.+||+.- T Consensus 84 ~~LAvria~dygi~~s~~~~s~A~~ay~~Ll~a~~~~p~~~r~~dmP~GsGN~~~~~~~~~y 145 (166) T protein:vir:10 84 YQLMLRVLADYGIAPTPRQEATAHTAYDALLTATLTVPSLKRRGDMPTGQGNQYDHFISGRY 145 (166) T ss_pred HHHHHHHHHhcCCCcCHHHHHHHHHHHHHHHHHHhhcccccccCCCCcccCccccccccccc Confidence 99999999999999999999999999999999999999999999999999999998887755 No 5 >protein:vir:100918 Length: 166 # NCBI annotation: Gp4 # Family: family:all:1693 # MgeID: mge:1509 # MgeName: ST104 # Cross-refs: genbank:acc:YP_006410;genbank:gi:46358702;genbank:GeneID:2777068 Probab=100.00 E-value=5.7e-63 Score=361.82 Aligned_cols=135 Identities=23% Similarity=0.355 Sum_probs=130.7 Q ss_pred CchHHHHHHHHHHHhhhhc--ccCCCCHHHHHHHHHHHHHHHHhh--cccccccCC-----CCCCCCCcccCCCHHHHHH Q lcl|NC_013599. 1 MTTVAEIIRDAFGHLRVLD--ANEAVEAEDATRAIRTLNLMMRRW--EANGIALGW-----SEVASPDDLLPAPAEAEEA 71 (135) Q Consensus 1 mtTkgdlV~~AlrklgV~~--t~~~vepqs~~~gi~dLe~MMaeW--~a~gi~iGy-----~e~~~PdDd~glp~~a~~A 71 (135) |+||||||++|||||||+| |++||||||+++||||||+||+|| +++||++|| .|+|+|||+||+|++|++| T Consensus 3 m~TkgdiVl~AlrklgVas~atltDvEpqs~~dgi~dLe~MMaeW~~~a~gI~lGY~fa~~~e~p~pdD~~glp~~a~~a 82 (166) T protein:vir:10 3 IKTKGDLVRAALRKLGVASDATLTDVEPQSMQDAVDDLEAMMAEWYQDGKGIVTGYVFSDDDNPPSEGDDHGLRSSAISA 82 (166) T ss_pred cchHHHHHHHHHHHhccccccccccCChHHHHHHHHHHHHHHHHHhhcCCCceecceecccCCCCCCccccCCCHhHHHH Confidence 9999999999999999999 999999999999999999999999 999999999 7889999999999999999 Q ss_pred HHHHHHHHHhhhhCCCCCHHHHHHHHHHHHHHHHHHhhcccccc--CCCCCCCCCCCcccCCccCC Q lcl|NC_013599. 72 IGYNLAVRLRAGYGVVLEQDVLNAAERGRAMLISDTVHASGVRM--QYALPAAESQRRYGSDGYDG 135 (135) Q Consensus 72 v~~nLA~ria~dygie~~~~v~~~A~~~~~~L~sa~~~a~~~~~--~~~mP~g~gnr~~~~~~~~~ 135 (135) |+|||||||||||||||+++|+++|+|+|++||+++.+++++++ |++||+|+||+++.+++|+- T Consensus 83 v~~~LAvria~dygie~t~~v~s~A~~ay~aLl~~t~~a~~~~~~Y~~dmP~G~Gn~~~~~~~~~y 148 (166) T protein:vir:10 83 VFHNLACRIAPDYALEATAKIIATAKYGKELLYKQTAIARAKRAPYPSRMPTGSGNSFANLNEWHY 148 (166) T ss_pred HHHHHHHHHHhhcCCCcCHHHHHHHHHHHHHHHHHHHhhhhhcccCCCCCCcCCCccchhcccccc Confidence 99999999999999999999999999999999999999999998 66999999999997776665 No 6 >protein:vir:9267 Length: 166 # NCBI annotation: 4 # Family: family:all:1693 # MgeID: mge:164 # MgeName: ST64T # Cross-refs: genbank:acc:NP_720331;genbank:gi:24371589;genbank:GeneID:955812 Probab=100.00 E-value=7.7e-63 Score=361.10 Aligned_cols=135 Identities=21% Similarity=0.342 Sum_probs=130.7 Q ss_pred CchHHHHHHHHHHHhhhhc--ccCCCCHHHHHHHHHHHHHHHHhh--cccccccCC-----CCCCCCCcccCCCHHHHHH Q lcl|NC_013599. 1 MTTVAEIIRDAFGHLRVLD--ANEAVEAEDATRAIRTLNLMMRRW--EANGIALGW-----SEVASPDDLLPAPAEAEEA 71 (135) Q Consensus 1 mtTkgdlV~~AlrklgV~~--t~~~vepqs~~~gi~dLe~MMaeW--~a~gi~iGy-----~e~~~PdDd~glp~~a~~A 71 (135) |+||||||++|||||||+| |++||||||+++||||||+||+|| +++||++|| .|+|+|||+||+|++|++| T Consensus 3 m~Tkgdiv~~AlrklgVas~atltDvEpqs~~dgi~dLe~MMaeW~~~a~gI~lGY~fa~~~e~p~pdD~~glp~~a~~a 82 (166) T protein:vir:92 3 IKTKGDLARAALRKLGVASDATLTDIEPQSMQDAVDDLEAMMAEWYQDGKGIITGYIFSDDDNPPAEGDDHGLRSSAVSA 82 (166) T ss_pred cchHHHHHHHHHHHhccccccccccCChHHHHHHHHHHHHHHHHHhhcCCCceeccccccccCCCCCccccCCCHhHHHH Confidence 9999999999999999999 999999999999999999999999 999999999 7889999999999999999 Q ss_pred HHHHHHHHHhhhhCCCCCHHHHHHHHHHHHHHHHHHhhcccccc--CCCCCCCCCCCcccCCccCC Q lcl|NC_013599. 72 IGYNLAVRLRAGYGVVLEQDVLNAAERGRAMLISDTVHASGVRM--QYALPAAESQRRYGSDGYDG 135 (135) Q Consensus 72 v~~nLA~ria~dygie~~~~v~~~A~~~~~~L~sa~~~a~~~~~--~~~mP~g~gnr~~~~~~~~~ 135 (135) |+|||||||||||||||+++|+++|+|+|++||+++.+++++++ |++||+|+||+++.+++|+- T Consensus 83 v~~~LAvria~dygie~t~~v~s~A~~~y~aLl~~t~~a~~~r~~Y~~dmP~G~Gn~~~~~~~~~y 148 (166) T protein:vir:92 83 VFHNLACRIAPDYALEATAKIIATAKYGKELLYKQTAIARAKRAPYPSRMPTGSGNSFANLNEWHY 148 (166) T ss_pred HHHHHHHHHHhhcCCCcCHHHHHHHHHHHHHHHHHHHhhcccccCCCCCCCcCCCccchhcccccc Confidence 99999999999999999999999999999999999999999998 66999999999997777665 No 7 >protein:vir:2108 Length: 166 # NCBI annotation: head completion protein # Family: family:all:1693 # MgeID: mge:46 # MgeName: P22 # Cross-refs: genbank:acc:NP_059632;genbank:gi:9635540;genbank:GeneID:1262828 Probab=100.00 E-value=9.8e-62 Score=355.05 Aligned_cols=135 Identities=21% Similarity=0.348 Sum_probs=130.2 Q ss_pred CchHHHHHHHHHHHhhhhc--ccCCCCHHHHHHHHHHHHHHHHhh--cccccccCC-----CCCCCCCcccCCCHHHHHH Q lcl|NC_013599. 1 MTTVAEIIRDAFGHLRVLD--ANEAVEAEDATRAIRTLNLMMRRW--EANGIALGW-----SEVASPDDLLPAPAEAEEA 71 (135) Q Consensus 1 mtTkgdlV~~AlrklgV~~--t~~~vepqs~~~gi~dLe~MMaeW--~a~gi~iGy-----~e~~~PdDd~glp~~a~~A 71 (135) |+||||||++|||||||+| |++||||||+++||||||+||+|| +++||++|| .|+|+|||+||+|++|++| T Consensus 3 m~TkgdiVl~AlrklgVas~atltDvEpqs~~dgi~dLe~MMaeW~~~a~gI~lGY~fa~~~e~p~pdD~~glp~~a~~a 82 (166) T protein:vir:21 3 IKTKGDLVRAALRKLGVASDATLTDVEPQSMQDAVDDLEAMMAEWYQDGKGIITGYVFSDDENPPAEGDDHGLRSSAVSA 82 (166) T ss_pred cchHHHHHHHHHHHhccccccccccCChHHHHHHHHHHHHHHHHHhhcCCCceecceecccCCCCCCccccCCCHhHHHH Confidence 9999999999999999999 999999999999999999999999 999999999 7889999999999999999 Q ss_pred HHHHHHHHHhhhhCCCCCHHHHHHHHHHHHHHHHHHhhcccccc--CCCCCCCCCCCcccCCccCC Q lcl|NC_013599. 72 IGYNLAVRLRAGYGVVLEQDVLNAAERGRAMLISDTVHASGVRM--QYALPAAESQRRYGSDGYDG 135 (135) Q Consensus 72 v~~nLA~ria~dygie~~~~v~~~A~~~~~~L~sa~~~a~~~~~--~~~mP~g~gnr~~~~~~~~~ 135 (135) |+|||||||||||||||+++|+++|+|+|++|++++.++++.|+ +++||+|+||+++.+++|+- T Consensus 83 v~~~LAvria~dygie~t~~v~~~A~~aya~Lls~~~~a~~kR~~y~~dmP~G~Gn~~~~~~~~~y 148 (166) T protein:vir:21 83 VFHNLACRIAPDYALEATAKIIATAKYGKELLYKQTAISRAKRAPYPSRMPTGSGNSFANLNEWHY 148 (166) T ss_pred HHHHHHHHHHhhcCCCcCHHHHHHHHHHHHHHHHHHhhhhhhccCCCCCCCcCCCccchhcccccc Confidence 99999999999999999999999999999999999999999997 45899999999997777665 No 8 >protein:vir:108311 Length: 249 # NCBI annotation: hypothetical protein # Family: family:all:28027 # MgeID: mge:2007 # MgeName: BA3 # Cross-refs: genbank:acc:YP_001552279;genbank:gi:160700604;genbank:GeneID:5758827 Probab=99.41 E-value=1.9e-15 Score=101.29 Aligned_cols=133 Identities=23% Similarity=0.333 Sum_probs=101.0 Q ss_pred CchHHHHHHHHHHHhhhhcccCCCCHHHHHHHHHHHHHHHHhhcccc-------------------cccC---------- Q lcl|NC_013599. 1 MTTVAEIIRDAFGHLRVLDANEAVEAEDATRAIRTLNLMMRRWEANG-------------------IALG---------- 51 (135) Q Consensus 1 mtTkgdlV~~AlrklgV~~t~~~vepqs~~~gi~dLe~MMaeW~a~g-------------------i~iG---------- 51 (135) =-|++|||..|||++||+-..+....++++|++..|++||.+|+.-+ .-|| T Consensus 2 sqt~~~II~~ALk~aGvla~Getp~aee~~DA~~~Ln~Ml~~W~~~rl~V~~~~~~t~vl~~G~~~YtVGi~~~~~~~~~ 81 (249) T protein:vir:10 2 ARTVGDIIRSSMRKIGVLAAGEPLPANEGDDALEVFAQMVDAWTNETLLIPVVNVVTKVLVENQPEYTIGIYPEPVPDPL 81 (249) T ss_pred ccCHHHHHHHHHHHccccccCCCCCHhHHHHHHHHHHHHHHHHHhCceeEEeeeeeeeeccCCcceEEeeeccccccccC Confidence 45999999999999999999999999999999999999999996554 1223 Q ss_pred --------CCC-----------------------------------------------------CCCCC----------- Q lcl|NC_013599. 52 --------WSE-----------------------------------------------------VASPD----------- 59 (135) Q Consensus 52 --------y~e-----------------------------------------------------~~~Pd----------- 59 (135) +.+ .|.|+ T Consensus 82 p~~~i~~~RP~~i~sA~~r~~~d~~~~~~~i~~EdY~rI~~Kt~~~~ps~~f~d~g~p~g~i~vwP~P~~~~tl~~~v~~ 161 (249) T protein:vir:10 82 PSNHIETGRPERILSAFIRDRYDTDYIQEIIDVETYSRISRKTNTSRPSRFYVSKGWPLNTILFESVPYQDETLHLEVVQ 161 (249) T ss_pred CCCceEeecchheeeeeeecccccchhhhhhchhhhhhcCCCCCCCCceEEEEcCCCCcceEEEEecCCCCceEEEEEEe Confidence 100 02233 Q ss_pred ------------cccCCCHHHHHHHHHHHHHHHhhhhCCCCCHHHHHHHHHHHHHHHHHHhhccccccCCCCCCCCCCC- Q lcl|NC_013599. 60 ------------DLLPAPAEAEEAIGYNLAVRLRAGYGVVLEQDVLNAAERGRAMLISDTVHASGVRMQYALPAAESQR- 126 (135) Q Consensus 60 ------------Dd~glp~~a~~Av~~nLA~ria~dygie~~~~v~~~A~~~~~~L~sa~~~a~~~~~~~~mP~g~gnr- 126 (135) |..-||++|..|..|||||+|+|+||+|.++-|+.-|+.++..|-++=...+-+..+ ||++-++| T Consensus 162 pL~~f~~~a~ltd~i~LPpey~~AL~~NLavel~peyG~ev~~~v~~~A~~a~~~ikraN~q~~~l~~~--~~~~~~r~G 239 (249) T protein:vir:10 162 PLSEILPTACLTDVINLPPGYERALIYNLCLELASEWGKEVTALVATQAVEGKKWLKRNNYRPLVLGAD--RAVATQRKG 239 (249) T ss_pred ehhhhccccccchhccCCHHHHHHHHHHHHHhhccccCCccCHHHHHHHHHHHHHHHhccCcceeeecc--cccccccCc Confidence 345679999999999999999999999999999999999999887665444444333 44444443 Q ss_pred cccCCccCC Q lcl|NC_013599. 127 RYGSDGYDG 135 (135) Q Consensus 127 ~~~~~~~~~ 135 (135) ..|++=-.| T Consensus 240 ~~~~~~~~~ 248 (249) T protein:vir:10 240 IGTYIIEQG 248 (249) T ss_pred ceEEEecCC Confidence 334444444 No 9 >protein:vir:101857 Length: 307 # NCBI annotation: gp13 neck protein # Family: family:all:1103 # MgeID: mge:1580 # MgeName: 31 # Cross-refs: genbank:acc:YP_238876;genbank:gi:66391951;genbank:GeneID:3416684 Probab=70.53 E-value=0.011 Score=31.34 Aligned_cols=120 Identities=12% Similarity=0.110 Sum_probs=68.8 Q ss_pred CchHHHHHHHHHHHhhhhc-ccCCCCHHHHHHHHHHHHHHHHhhcccccccCCCCCCCCCcccCCCHHHHHHHHHHHHHH Q lcl|NC_013599. 1 MTTVAEIIRDAFGHLRVLD-ANEAVEAEDATRAIRTLNLMMRRWEANGIALGWSEVASPDDLLPAPAEAEEAIGYNLAVR 79 (135) Q Consensus 1 mtTkgdlV~~AlrklgV~~-t~~~vepqs~~~gi~dLe~MMaeW~a~gi~iGy~e~~~PdDd~glp~~a~~Av~~nLA~r 79 (135) =.++.||..-+||+|| ++ .+..|+.+-+.|.|++==.+..||+.||..=+|- +...+++ .+..+ +- T Consensus 5 ~~s~~eLkdyiLRrLG-APii~InVtd~Qi~DcId~Alely~EyHydG~~k~y~-~~~ite~-----~~~~g------~~ 71 (307) T protein:vir:10 5 CNNPLELKDAILRRLG-APIVHVEVTEEQVFDCISRALELYGEYHYDGFHRTYA-TVVLTEQ-----QAKTG------II 71 (307) T ss_pred CCCHHHHHHHHHHhcC-CceEEEEcCHHHHHHHHHHHHHHhhhhcccccccceE-EEEechh-----hccCC------EE Confidence 4568999999999999 88 8899999999999999999999999999988883 2222221 00000 11 Q ss_pred HhhhhCCCCCHHHHHHHHHHHHHHH-HHHhhccccc----cCCCCCCCCCCCcccCCccCC Q lcl|NC_013599. 80 LRAGYGVVLEQDVLNAAERGRAMLI-SDTVHASGVR----MQYALPAAESQRRYGSDGYDG 135 (135) Q Consensus 80 ia~dygie~~~~v~~~A~~~~~~L~-sa~~~a~~~~----~~~~mP~g~gnr~~~~~~~~~ 135 (135) ..++..+....+|+.+..-+...+= +++ -|-.. .--+-+.|.+.++.+.|.|-+ T Consensus 72 d~~d~~v~avt~iirt~~~~~~t~dG~a~--y~w~~d~~~g~~g~~~~~~~~~~~~n~~g~ 130 (307) T protein:vir:10 72 DMKGGNVFAVTQVLRTNVGSIITMDGTAV--YPWFTDFVMGMTGASIGGQCKWYGPNAFGG 130 (307) T ss_pred ecCCcchhhhhhhhhhccccccccCcccc--cccccccceeecCCccceeeeeeccccccc Confidence 2234444444555533222111110 000 00000 001233455555666666655 No 10 >protein:vir:101153 Length: 307 # NCBI annotation: neck protein # Family: family:all:1103 # MgeID: mge:1582 # MgeName: 44RR2.8t # Cross-refs: genbank:acc:NP_932504;genbank:gi:37651630;genbank:GeneID:2610646 Probab=70.53 E-value=0.011 Score=31.34 Aligned_cols=120 Identities=12% Similarity=0.110 Sum_probs=68.8 Q ss_pred CchHHHHHHHHHHHhhhhc-ccCCCCHHHHHHHHHHHHHHHHhhcccccccCCCCCCCCCcccCCCHHHHHHHHHHHHHH Q lcl|NC_013599. 1 MTTVAEIIRDAFGHLRVLD-ANEAVEAEDATRAIRTLNLMMRRWEANGIALGWSEVASPDDLLPAPAEAEEAIGYNLAVR 79 (135) Q Consensus 1 mtTkgdlV~~AlrklgV~~-t~~~vepqs~~~gi~dLe~MMaeW~a~gi~iGy~e~~~PdDd~glp~~a~~Av~~nLA~r 79 (135) =.++.||..-+||+|| ++ .+..|+.+-+.|.|++==.+..||+.||..=+|- +...+++ .+..+ +- T Consensus 5 ~~s~~eLkdyiLRrLG-APii~InVtd~Qi~DcId~Alely~EyHydG~~k~y~-~~~ite~-----~~~~g------~~ 71 (307) T protein:vir:10 5 CNNPLELKDAILRRLG-APIVHVEVTEEQVFDCISRALELYGEYHYDGFHRTYA-TVVLTEQ-----QAKTG------II 71 (307) T ss_pred CCCHHHHHHHHHHhcC-CceEEEEcCHHHHHHHHHHHHHHhhhhcccccccceE-EEEechh-----hccCC------EE Confidence 4568999999999999 88 8899999999999999999999999999988883 2222221 00000 11 Q ss_pred HhhhhCCCCCHHHHHHHHHHHHHHH-HHHhhccccc----cCCCCCCCCCCCcccCCccCC Q lcl|NC_013599. 80 LRAGYGVVLEQDVLNAAERGRAMLI-SDTVHASGVR----MQYALPAAESQRRYGSDGYDG 135 (135) Q Consensus 80 ia~dygie~~~~v~~~A~~~~~~L~-sa~~~a~~~~----~~~~mP~g~gnr~~~~~~~~~ 135 (135) ..++..+....+|+.+..-+...+= +++ -|-.. .--+-+.|.+.++.+.|.|-+ T Consensus 72 d~~d~~v~avt~iirt~~~~~~t~dG~a~--y~w~~d~~~g~~g~~~~~~~~~~~~n~~g~ 130 (307) T protein:vir:10 72 DMKGGNVFAVTQVLRTNVGSIITMDGTAV--YPWFTDFVMGMTGASIGGQCKWYGPNAFGG 130 (307) T ss_pred ecCCcchhhhhhhhhhccccccccCcccc--cccccccceeecCCccceeeeeeccccccc Confidence 2234444444555533222111110 000 00000 001233455555666666655 No 11 >protein:vir:81013 Length: 310 # NCBI annotation: gp13 neck protein # Family: family:all:1103 # MgeID: mge:1888 # MgeName: Phi1 # Cross-refs: genbank:acc:YP_001469493;genbank:gi:157311450;genbank:GeneID:5602275 Probab=67.42 E-value=0.011 Score=31.25 Aligned_cols=122 Identities=14% Similarity=0.134 Sum_probs=68.1 Q ss_pred CchHHHHHHHHHHHhhhhc-ccCCCCHHHHHHHHHHHHHHHHhhcccccccCCCCCCCCCcccCCCHHHHHHHHHHHHHH Q lcl|NC_013599. 1 MTTVAEIIRDAFGHLRVLD-ANEAVEAEDATRAIRTLNLMMRRWEANGIALGWSEVASPDDLLPAPAEAEEAIGYNLAVR 79 (135) Q Consensus 1 mtTkgdlV~~AlrklgV~~-t~~~vepqs~~~gi~dLe~MMaeW~a~gi~iGy~e~~~PdDd~glp~~a~~Av~~nLA~r 79 (135) -.++.||..-+||+|| ++ .+..|+.+-+.|.|++==.+-.||+.||..=+|- +...+++- + +--+- T Consensus 6 ~~s~~eLkdyiLRrLG-APvi~InVtd~Qi~DcId~Alely~EyHydG~~k~yl-~~~ited~-----~------~~g~~ 72 (310) T protein:vir:81 6 TNNPRELKDAILRRLG-APVINVEVTEDQIYDCIQRALELYGEYHFDGVNKGYK-VFRVSAEQ-----A------QHGVF 72 (310) T ss_pred CCCHHHHHHHHHHhcC-CceEEEecCHHHHHHHHHHHHHHhhhhcccccccceE-EEEechhh-----h------cCCee Confidence 6789999999999999 88 8999999999999999999999999999998884 22222210 0 11111 Q ss_pred HhhhhCCCCCHHHHHHHHHHHHHHH-HHH-----hhccccccCCCCCCCCCCCcccCCccCC Q lcl|NC_013599. 80 LRAGYGVVLEQDVLNAAERGRAMLI-SDT-----VHASGVRMQYALPAAESQRRYGSDGYDG 135 (135) Q Consensus 80 ia~dygie~~~~v~~~A~~~~~~L~-sa~-----~~a~~~~~~~~mP~g~gnr~~~~~~~~~ 135 (135) -.++.++....+++.+.--+.-.+= .++ -..-++..-++.+-.+..++++.|.+-+ T Consensus 73 d~~d~~v~avt~i~~t~~g~~~t~dg~a~Y~~~~d~v~Gi~~v~g~~~~~~~~~~~~~~~g~ 134 (310) T protein:vir:81 73 DLSDSGVFAVTKIIRTNVGSAATMDGTAVYPWFTDFLLGLAGVNGGLGSGCSKFYGPNAMGG 134 (310) T ss_pred eeCCcceeeeehhhhccccccccccccccccccCceeeeeccccccccchhhhhccccccch Confidence 2345555555565544211110000 000 0000111112222222334444443333 No 12 >protein:vir:6589 Length: 310 # NCBI annotation: neck protein # Family: family:all:1103 # MgeID: mge:139 # MgeName: RB49 # Cross-refs: genbank:acc:NP_891720;genbank:gi:33620666;genbank:GeneID:1725419 Probab=67.42 E-value=0.011 Score=31.25 Aligned_cols=122 Identities=14% Similarity=0.134 Sum_probs=68.1 Q ss_pred CchHHHHHHHHHHHhhhhc-ccCCCCHHHHHHHHHHHHHHHHhhcccccccCCCCCCCCCcccCCCHHHHHHHHHHHHHH Q lcl|NC_013599. 1 MTTVAEIIRDAFGHLRVLD-ANEAVEAEDATRAIRTLNLMMRRWEANGIALGWSEVASPDDLLPAPAEAEEAIGYNLAVR 79 (135) Q Consensus 1 mtTkgdlV~~AlrklgV~~-t~~~vepqs~~~gi~dLe~MMaeW~a~gi~iGy~e~~~PdDd~glp~~a~~Av~~nLA~r 79 (135) -.++.||..-+||+|| ++ .+..|+.+-+.|.|++==.+-.||+.||..=+|- +...+++- + +--+- T Consensus 6 ~~s~~eLkdyiLRrLG-APvi~InVtd~Qi~DcId~Alely~EyHydG~~k~yl-~~~ited~-----~------~~g~~ 72 (310) T protein:vir:65 6 TNNPRELKDAILRRLG-APVINVEVTEDQIYDCIQRALELYGEYHFDGVNKGYK-VFRVSAEQ-----A------QHGVF 72 (310) T ss_pred CCCHHHHHHHHHHhcC-CceEEEecCHHHHHHHHHHHHHHhhhhcccccccceE-EEEechhh-----h------cCCee Confidence 6789999999999999 88 8999999999999999999999999999998884 22222210 0 11111 Q ss_pred HhhhhCCCCCHHHHHHHHHHHHHHH-HHH-----hhccccccCCCCCCCCCCCcccCCccCC Q lcl|NC_013599. 80 LRAGYGVVLEQDVLNAAERGRAMLI-SDT-----VHASGVRMQYALPAAESQRRYGSDGYDG 135 (135) Q Consensus 80 ia~dygie~~~~v~~~A~~~~~~L~-sa~-----~~a~~~~~~~~mP~g~gnr~~~~~~~~~ 135 (135) -.++.++....+++.+.--+.-.+= .++ -..-++..-++.+-.+..++++.|.+-+ T Consensus 73 d~~d~~v~avt~i~~t~~g~~~t~dg~a~Y~~~~d~v~Gi~~v~g~~~~~~~~~~~~~~~g~ 134 (310) T protein:vir:65 73 DLSDSGVFAVTKIIRTNVGSAATMDGTAVYPWFTDFLLGLAGVNGGLGSGCSKFYGPNAMGG 134 (310) T ss_pred eeCCcceeeeehhhhccccccccccccccccccCceeeeeccccccccchhhhhccccccch Confidence 2345555555565544211110000 000 0000111112222222334444443333 No 13 >protein:vir:106985 Length: 276 # NCBI annotation: neck protein gp13 # Family: family:all:1103 # MgeID: mge:1459 # MgeName: S-PM2 # Cross-refs: genbank:acc:YP_195127;genbank:gi:58532904;uniprot:Q5GQW0;genbank:GeneID:3260482 Probab=63.13 E-value=0.081 Score=26.55 Aligned_cols=99 Identities=9% Similarity=0.034 Sum_probs=55.4 Q ss_pred CchHHHHHHHHHHHhhhhc-ccCCCCHHHHHHHHHHHHHHHHhhcccccccCCC-CCCCCCcccCCCHHHHHHHHHHHHH Q lcl|NC_013599. 1 MTTVAEIIRDAFGHLRVLD-ANEAVEAEDATRAIRTLNLMMRRWEANGIALGWS-EVASPDDLLPAPAEAEEAIGYNLAV 78 (135) Q Consensus 1 mtTkgdlV~~AlrklgV~~-t~~~vepqs~~~gi~dLe~MMaeW~a~gi~iGy~-e~~~PdDd~glp~~a~~Av~~nLA~ 78 (135) -.++.||..-+||+|| ++ .+..|+.+-+.|.|++==.+..||+.||..=+|- .....+|..- +++. T Consensus 4 p~s~~eLkdyiLRrLG-aPii~InVtd~Qi~DcId~Alely~EyHydG~~k~y~~~~i~~dd~~~-------~~~~---- 71 (276) T protein:vir:10 4 PSSKQELIDYCKRQLG-APVLQINTDSAQDDDIIDQAIQYYHEYHFDGIERMYLKHQFTADDVTR-------FTSS---- 71 (276) T ss_pred CCCHHHHHHHHHHhcC-CceEEEEcCHHHHHHHHHHHHHHhhhhcccccccceEEEEechHHhhh-------hhhh---- Confidence 4578999999999999 88 8999999999999999999999999999998884 2222222111 1111 Q ss_pred HHhhhhCCCCCHHHHHHHHHHHHHHHHHHhhccccccCCC---C----------CCCCCCCcccCCccCC Q lcl|NC_013599. 79 RLRAGYGVVLEQDVLNAAERGRAMLISDTVHASGVRMQYA---L----------PAAESQRRYGSDGYDG 135 (135) Q Consensus 79 ria~dygie~~~~v~~~A~~~~~~L~sa~~~a~~~~~~~~---m----------P~g~gnr~~~~~~~~~ 135 (135) + ..+.+...-+...... + ..| +.+..+.|-|+. T Consensus 72 -------------~----------~~~~~~s~~~~~g~~~Y~~~pd~v~gi~~v~~g-~s~~~g~n~f~~ 117 (276) T protein:vir:10 72 -------------D----------QLTTAPNNDDWENRNNYIQVPDAVIGISKVFGV-SSNFLRNNLFGL 117 (276) T ss_pred -------------h----------hcccccceeeeeccCcceecCcchhhhhhhccc-CccccCCccccc Confidence 0 0000000000000000 0 111 112222222332 No 14 >protein:vir:6889 Length: 308 # NCBI annotation: gp13 neck protein # Family: family:all:1103 # MgeID: mge:140 # MgeName: RB69 # Cross-refs: genbank:acc:NP_861865;genbank:gi:32453656;genbank:GeneID:1494291 Probab=62.05 E-value=0.036 Score=28.49 Aligned_cols=122 Identities=11% Similarity=0.102 Sum_probs=65.3 Q ss_pred CchHHHHHHHHHHHhhhhc-ccCCCCHHHHHHHHHHHHHHHHhhcccccccCCC-CCCCCCcccCCCHHHHHHHHHHHHH Q lcl|NC_013599. 1 MTTVAEIIRDAFGHLRVLD-ANEAVEAEDATRAIRTLNLMMRRWEANGIALGWS-EVASPDDLLPAPAEAEEAIGYNLAV 78 (135) Q Consensus 1 mtTkgdlV~~AlrklgV~~-t~~~vepqs~~~gi~dLe~MMaeW~a~gi~iGy~-e~~~PdDd~glp~~a~~Av~~nLA~ 78 (135) -.++.||..-+||+|| ++ .+..|+.+-+.|.|++==.+..||+.||..=+|- .....+|- + +=-+ T Consensus 6 ~~s~~eLkdyiLRrLG-APvi~InVtd~Qi~DcId~Alely~EyHydG~~k~y~~~~i~~d~~------~------k~g~ 72 (308) T protein:vir:68 6 AQNPKELKDVILRRLG-APIVNVELTTDQIYDCISRALELYGEYHFDGLNKGFHVFFVDDEEK------Y------RHGV 72 (308) T ss_pred CCCHHHHHHHHHHhcC-CceEEEecCHHHHHHHHHHHHHHhhhhhccccccceEEEEeChhhh------h------ccce Confidence 4589999999999999 88 8899999999999999999999999999988884 11222220 0 0001 Q ss_pred HHhhhhCCCCCHHHHHHHHHHHHHHH-HHH-----hhccccccCCCCCCCCCCCcccCCccCC Q lcl|NC_013599. 79 RLRAGYGVVLEQDVLNAAERGRAMLI-SDT-----VHASGVRMQYALPAAESQRRYGSDGYDG 135 (135) Q Consensus 79 ria~dygie~~~~v~~~A~~~~~~L~-sa~-----~~a~~~~~~~~mP~g~gnr~~~~~~~~~ 135 (135) ...++.++....+++.+-.-+.-.+= +++ -..-++..-++..-++-+++.+.|.+-+ T Consensus 73 f~~~d~~v~avT~i~rt~~gs~~t~dg~a~Y~~~~dfv~g~~g~~g~~~~~~~~~~g~n~~g~ 135 (308) T protein:vir:68 73 FDMRGSNVFAVTRIIRTNVGSITSMDGNATYPWFTDFLLGMAGVSGGMGSNCGKFYGPNAFGA 135 (308) T ss_pred eecCCccchhhhhhhhccccccccccccccccccCceeeeecccCcccccccchhcccccccc Confidence 12345555555555432111000000 000 0000000111111122234444443332 No 15 >protein:vir:107900 Length: 311 # NCBI annotation: gp13 neck protein # Family: family:all:1103 # MgeID: mge:2002 # MgeName: JS98 # Cross-refs: genbank:acc:YP_001595289;genbank:gi:161622595;genbank:GeneID:5783619 Probab=61.63 E-value=0.075 Score=26.74 Aligned_cols=118 Identities=14% Similarity=0.170 Sum_probs=70.0 Q ss_pred Cc----hHHHHHHHHHHHhhhhc-ccCCCCHHHHHHHHHHHHHHHHhhcccccccCCC-CCCCCCcccCCCHHHHHHHHH Q lcl|NC_013599. 1 MT----TVAEIIRDAFGHLRVLD-ANEAVEAEDATRAIRTLNLMMRRWEANGIALGWS-EVASPDDLLPAPAEAEEAIGY 74 (135) Q Consensus 1 mt----TkgdlV~~AlrklgV~~-t~~~vepqs~~~gi~dLe~MMaeW~a~gi~iGy~-e~~~PdDd~glp~~a~~Av~~ 74 (135) |. ++.||..-+||+|| ++ .+..|+.+-+.|.|++==.+..||+.||..=+|- .....||.- ++...+ T Consensus 1 MA~~~~s~~eLkdyiLRrLG-APvi~InVtd~Qi~DcId~ALely~EyHydG~~k~y~~~~it~dd~~----~~~~g~-- 73 (311) T protein:vir:10 1 MASESYNPKQLKDAILRRLG-APITNIEVTTDQVYDCIQRALELYGEYHYNGYNKGYQAFYIGHDDEE----KFRNGV-- 73 (311) T ss_pred CCCCCCCHHHHHHHHHHhcC-CceEEEecCHHHHHHHHHHHHHHhhhhhccccccceEEEEecchhhh----hccCCc-- Confidence 77 78999999999999 88 8999999999999999999999999999988883 223333320 111110 Q ss_pred HHHHHHhhhhCCCCCHHHHHHHHHHHHHHHHHHhhccccccCC-----------CCCCCCCCCcccCCccCC Q lcl|NC_013599. 75 NLAVRLRAGYGVVLEQDVLNAAERGRAMLISDTVHASGVRMQY-----------ALPAAESQRRYGSDGYDG 135 (135) Q Consensus 75 nLA~ria~dygie~~~~v~~~A~~~~~~L~sa~~~a~~~~~~~-----------~mP~g~gnr~~~~~~~~~ 135 (135) -..++.+|....+++.+-.-+ +.+ . -..+.++- ....|++.+....|.+.+ T Consensus 74 ----~d~~~~~v~avt~i~~t~~gs---~~s-~--dg~atY~w~~d~v~G~~~v~g~~~s~~~~~g~n~fg~ 135 (311) T protein:vir:10 74 ----FDLKGRNIFAVTQILRTNVGS---LTS-M--DGQATYPWFTDFVLGLAGINGGLGSSCNSFGPNAFGA 135 (311) T ss_pred ----eecCCcchhHHHHhhcccccc---ccC-C--CCcccccccCchhhhhhhhhccccccccccccccccc Confidence 122334444333333221000 000 0 00000111 023466677777777775 No 16 >protein:vir:103451 Length: 309 # NCBI annotation: neck protein # Family: family:all:1103 # MgeID: mge:1542 # MgeName: RB32 # Cross-refs: genbank:acc:YP_803103;genbank:gi:116326383;genbank:GeneID:4405480 Probab=59.79 E-value=0.069 Score=26.95 Aligned_cols=121 Identities=12% Similarity=0.154 Sum_probs=63.9 Q ss_pred CchHHHHHHHHHHHhhhhc-ccCCCCHHHHHHHHHHHHHHHHhhcccccccCCC-CCCCCCcccCCCHHHHHHHHHHHHH Q lcl|NC_013599. 1 MTTVAEIIRDAFGHLRVLD-ANEAVEAEDATRAIRTLNLMMRRWEANGIALGWS-EVASPDDLLPAPAEAEEAIGYNLAV 78 (135) Q Consensus 1 mtTkgdlV~~AlrklgV~~-t~~~vepqs~~~gi~dLe~MMaeW~a~gi~iGy~-e~~~PdDd~glp~~a~~Av~~nLA~ 78 (135) -.++.||..-+||+|| ++ .+..|+.+-+.|.|++==.+..||+.||..=+|- ..-.+||. ++...| T Consensus 6 ~~s~~eLkdyiLRrLG-APvi~InVtd~Qi~DcId~Alqly~EyHydG~~k~y~~~~i~~de~-----~~~~gv------ 73 (309) T protein:vir:10 6 SQNPKELKDVILRRLG-APIINVELTPDQIYDCIQRALELYGEYHFDGLNKGFHVFYVGDDEE-----KYKTGV------ 73 (309) T ss_pred CCCHHHHHHHHHHhcC-CceEEEecCHHHHHHHHHHHHHHhhhhhccccccceEEEEeCchhh-----hhccce------ Confidence 4589999999999999 88 8899999999999999999999999999888873 22233331 000000 Q ss_pred HHhhhhCCCCCHHHHHHHHHHHHHH--------HHHHhhccccccCCCCCCCCCCCcccCCccCC Q lcl|NC_013599. 79 RLRAGYGVVLEQDVLNAAERGRAML--------ISDTVHASGVRMQYALPAAESQRRYGSDGYDG 135 (135) Q Consensus 79 ria~dygie~~~~v~~~A~~~~~~L--------~sa~~~a~~~~~~~~mP~g~gnr~~~~~~~~~ 135 (135) --..+.++....+++.+..-+...+ +++++. ++..-++-.-.+-|++..-|-|.+ T Consensus 74 ~d~~~~~v~avt~i~~t~~gs~~s~dg~aty~w~~dfi~--g~~~v~g~~~~s~~~~~~pn~~g~ 136 (309) T protein:vir:10 74 FDLRGSNVFAVTRILRTNVGSITSMDGNATYPWFTDFLL--GMAGINGGMGTSCNRFYGPNAFGA 136 (309) T ss_pred eeccCcchhhhhhhhhcccccccccCcccccccccchhh--hhhhhhcccccccccccCccccee Confidence 0112233333333332211100000 000000 000001111122334444455543 No 17 >protein:vir:100534 Length: 314 # NCBI annotation: gp13 head completion protein # Family: family:all:1103 # MgeID: mge:1488 # MgeName: 25 # Cross-refs: genbank:acc:YP_656375;genbank:gi:109290126;genbank:GeneID:4156512 Probab=58.76 E-value=0.026 Score=29.31 Aligned_cols=117 Identities=12% Similarity=0.133 Sum_probs=62.8 Q ss_pred Cch----HHHHHHHHHHHhhhhc-ccCCCCHHHHHHHHHHHHHHHHhhcccccccCCC-CCCCCCc----ccCCCHHHHH Q lcl|NC_013599. 1 MTT----VAEIIRDAFGHLRVLD-ANEAVEAEDATRAIRTLNLMMRRWEANGIALGWS-EVASPDD----LLPAPAEAEE 70 (135) Q Consensus 1 mtT----kgdlV~~AlrklgV~~-t~~~vepqs~~~gi~dLe~MMaeW~a~gi~iGy~-e~~~PdD----d~glp~~a~~ 70 (135) |.| +.||..-+||+|| ++ .+..|+.+-+.|.|++==.+..||+.||..=.|- .....++ -.-++ T Consensus 1 ma~~~~s~~eLkdyiLRrLG-APvi~InVtddQI~DcId~ALqlf~EyHyDG~~k~yl~~~ite~~~k~g~~d~~----- 74 (314) T protein:vir:10 1 MSYTTNNPLELKDAILRRLG-APIVHVEVTEQQVFDCISRALELYGEYHYDGFHKTYATVVLTEEQAKTGVISFA----- 74 (314) T ss_pred CCCCCCCHHHHHHHHHHhcC-CceEEEEcCHHHHHHHHHHHHHHhhhhcccccccceEEEEechhhhcCCEEeeC----- Confidence 665 8999999999999 88 8899999999999999999999999999988884 1122221 01111 Q ss_pred HHHHHHHHHHhhhhCCCCCHHHHHHHHHHHHHHH-HHH-h-hccccccCCCCCCCCCCCcccCCccCC Q lcl|NC_013599. 71 AIGYNLAVRLRAGYGVVLEQDVLNAAERGRAMLI-SDT-V-HASGVRMQYALPAAESQRRYGSDGYDG 135 (135) Q Consensus 71 Av~~nLA~ria~dygie~~~~v~~~A~~~~~~L~-sa~-~-~a~~~~~~~~mP~g~gnr~~~~~~~~~ 135 (135) +..+....+++.+---+-..+- +++ . -.+-+---...+.|.+-+..+.|.+.+ T Consensus 75 ------------~~~v~avt~i~rt~~~~~~~~~g~a~Y~~~~d~~lG~~~~~~~~~~~~~~pn~fg~ 130 (314) T protein:vir:10 75 ------------GGNVFAVTQVIRTNIGSIITMDGTAVYPWFTDFVMGMTGASIGGQCRWYGPNAFGA 130 (314) T ss_pred ------------CccceehhhhhhcccccccccCccccccccCceeeeecccccccccceeccccccc Confidence 2222222222221100000000 000 0 000000111233333334445555554 No 18 >protein:vir:104585 Length: 268 # NCBI annotation: gp13 # Family: family:all:1103 # MgeID: mge:1548 # MgeName: P-SSM4 # Cross-refs: genbank:acc:YP_214649;genbank:gi:61806290;genbank:GeneID:3294640 Probab=56.05 E-value=0.2 Score=24.40 Aligned_cols=98 Identities=10% Similarity=0.050 Sum_probs=53.6 Q ss_pred CchHHHHHHHHHHHhhhhc-ccCCCCHHHHHHHHHHHHHHHHhhcccccccCCCCCCCCCcccCCCHHHHHHHHHHHHHH Q lcl|NC_013599. 1 MTTVAEIIRDAFGHLRVLD-ANEAVEAEDATRAIRTLNLMMRRWEANGIALGWSEVASPDDLLPAPAEAEEAIGYNLAVR 79 (135) Q Consensus 1 mtTkgdlV~~AlrklgV~~-t~~~vepqs~~~gi~dLe~MMaeW~a~gi~iGy~e~~~PdDd~glp~~a~~Av~~nLA~r 79 (135) -.++.||..-+||+|| ++ .+..|+.+-+.|.|++==.+..||+.||..=+|- +. T Consensus 6 ~~s~~eLkdyiLRrLG-aPii~InVtd~Qi~DcId~Alely~EyHydG~~k~y~-~f----------------------- 60 (268) T protein:vir:10 6 PASKTELKDYALRRLG-FPTIDINVATEQLDDLVEEAIDYYQEYHYNGSFQTFM-RI----------------------- 60 (268) T ss_pred CCCHHHHHHHHHHhcC-CceEEEecCHHHHHHHHHHHHHHhhhhcccccccceE-EE----------------------- Confidence 6789999999999999 88 8999999999999999999999999999988885 11 Q ss_pred HhhhhCCCCCHHHHHHHHHHHHHHHHHHhhccccccCCCCCCCC----CCCcccCC-ccCC Q lcl|NC_013599. 80 LRAGYGVVLEQDVLNAAERGRAMLISDTVHASGVRMQYALPAAE----SQRRYGSD-GYDG 135 (135) Q Consensus 80 ia~dygie~~~~v~~~A~~~~~~L~sa~~~a~~~~~~~~mP~g~----gnr~~~~~-~~~~ 135 (135) +.++...+.+ .+. +.-.+++=.-..+-.+.|+ -+.+.+.- .|.. T Consensus 61 -------~vT~~~rt~~-~~~----t~~~t~~~~~~~nyi~~p~~~~Gv~~vf~~~~~~~~ 109 (268) T protein:vir:10 61 -------EVTEAIKTQA-KGF----TQEGSTPWYGQDNYVSTPPGTLGINHVYTNIGASSI 109 (268) T ss_pred -------EechHHhhcc-ccc----cccccccccCCCcceecCccccchhhhhcccccccc Confidence 1122221111 000 0000000000000000000 01111100 0100 No 19 >protein:vir:95323 Length: 201 # NCBI annotation: hypothetical protein # Family: family:all:1524 # MgeID: mge:1564 # MgeName: phiV10 # Cross-refs: genbank:acc:YP_512268;genbank:gi:89152435;genbank:GeneID:3952992 Probab=52.82 E-value=0.54 Score=22.03 Aligned_cols=125 Identities=18% Similarity=0.157 Sum_probs=74.3 Q ss_pred CchHHHHHHHHHHHhhhhcccCCCCHHHHH--------HHHHHHHHHHHhhccc----------ccccCCC--------- Q lcl|NC_013599. 1 MTTVAEIIRDAFGHLRVLDANEAVEAEDAT--------RAIRTLNLMMRRWEAN----------GIALGWS--------- 53 (135) Q Consensus 1 mtTkgdlV~~AlrklgV~~t~~~vepqs~~--------~gi~dLe~MMaeW~a~----------gi~iGy~--------- 53 (135) |+|+=||.-.||.++|=+.+....+..+-+ +.+++--.=++.|.+- .-..||. T Consensus 1 M~S~v~IcN~AL~~iG~a~~I~s~~e~s~~A~~C~~~Y~~~r~~~L~~~pW~FA~~r~~La~~a~~~~~~~yay~LP~Dc 80 (201) T protein:vir:95 1 MASVVEICNRALSNIGNSRSINSLTEASKEAGECSLHFEACRDAVLSDFDWNFATKRVALADTSNPPPDWEYAYQYPSDC 80 (201) T ss_pred CCCHHHHHHHHHHHhCCcccccccccCCHHHHHHHHhhHHHHHHHHhhcCchhhhhhhhcccccCCCCCCcccccccchh Confidence 999999999999999944333333222211 2333333346777432 0011220 Q ss_pred ---------------------------------------------CCCCCCcccCCCHHHHHHHHHHHHHHHhhhhCCCC Q lcl|NC_013599. 54 ---------------------------------------------EVASPDDLLPAPAEAEEAIGYNLAVRLRAGYGVVL 88 (135) Q Consensus 54 ---------------------------------------------e~~~PdDd~glp~~a~~Av~~nLA~ria~dygie~ 88 (135) ++.+..|..-.|+-|.+|+++.||.+||.. +-= T Consensus 81 lrv~~v~~~g~~~~~~~~~~~f~v~~~~~~~g~~l~td~~~~~l~Yv~~v~d~~~fd~~F~~ala~~LAa~la~p--lt~ 158 (201) T protein:vir:95 81 LRITEIMLPGVRNPTAAMRVQYEVGADTNGTGKLIYTDQPQAWLKYVSRVTDVNMFDAIFMEALAWRLAAAINMA--LTG 158 (201) T ss_pred hhhhhhccCCccccccccchhhhccccccccCceeeecCCceEEEEeecCCChhhccHHHHHHHHHHHHHHhhHh--hcC Confidence 112223456679999999999999999954 334 Q ss_pred CHHHHHHHHHHHHHHHHHHhhccccccCCCCCCCCCCCcccCCccCC Q lcl|NC_013599. 89 EQDVLNAAERGRAMLISDTVHASGVRMQYALPAAESQRRYGSDGYDG 135 (135) Q Consensus 89 ~~~v~~~A~~~~~~L~sa~~~a~~~~~~~~mP~g~gnr~~~~~~~~~ 135 (135) +.........-|+..+...+.+.+...+-+.|... .|-. T Consensus 159 ~~~~~~~~~q~~~~~l~~A~~~da~e~~~~~~~~~--------~~l~ 197 (201) T protein:vir:95 159 NADLGTFALNMYNRVILSAGSHSQNESQEPQPPVD--------EFTI 197 (201) T ss_pred ChHHHHHHHHHHHHHHHHHHhcccccCcccCCCcc--------hhhh Confidence 55677778888888887777776666544322111 1111 No 20 >protein:vir:7198 Length: 309 # NCBI annotation: gp13 neck protein # Family: family:all:1103 # MgeID: mge:142 # MgeName: T4 # Cross-refs: genbank:acc:NP_049772;genbank:gi:9632587;genbank:GeneID:1258809 Probab=52.54 E-value=0.062 Score=27.21 Aligned_cols=111 Identities=12% Similarity=0.162 Sum_probs=59.5 Q ss_pred CchHHHHHHHHHHHhhhhc-ccCCCCHHHHHHHHHHHHHHHHhhcccccccCCC-CCCCCCcc---cC---CCHHHHHHH Q lcl|NC_013599. 1 MTTVAEIIRDAFGHLRVLD-ANEAVEAEDATRAIRTLNLMMRRWEANGIALGWS-EVASPDDL---LP---APAEAEEAI 72 (135) Q Consensus 1 mtTkgdlV~~AlrklgV~~-t~~~vepqs~~~gi~dLe~MMaeW~a~gi~iGy~-e~~~PdDd---~g---lp~~a~~Av 72 (135) -.++.||..-+||+|| ++ .+..|+.+-+.|.|++==.+..||+.||..=+|- ..-.+||. .| +++..+.|| T Consensus 6 p~s~~eLkdyiLRrLG-APvi~InVtd~Qi~DcId~Alqly~EyHydG~~k~yl~~~i~~de~~~~~gv~d~~~~~v~aV 84 (309) T protein:vir:71 6 PQNPKELKDVILRRLG-APIINVELTPDQIYDCIQRALELYGEYHFDGLNKGFHVFYVGDDEERYKTGVFDLRGSNVFAV 84 (309) T ss_pred CCCHHHHHHHHHHhcC-CceEEEecCHHHHHHHHHHHHHHhhhhhccccccceEEEEeCchhhhhcccceecCCcchhhh Confidence 4589999999999999 88 8899999999999999999999999999988873 22233331 22 223333333 Q ss_pred HHHHHHHHhhhhCCCCCHHHHHHHHHHHHHHHHHHhhccccccCC------CC-----CCCC-CCCcccCCccCC Q lcl|NC_013599. 73 GYNLAVRLRAGYGVVLEQDVLNAAERGRAMLISDTVHASGVRMQY------AL-----PAAE-SQRRYGSDGYDG 135 (135) Q Consensus 73 ~~nLA~ria~dygie~~~~v~~~A~~~~~~L~sa~~~a~~~~~~~------~m-----P~g~-gnr~~~~~~~~~ 135 (135) .+|+.+. -..+.+-=.+ +.++. +| +.|. .|++..-|-|-+ T Consensus 85 -----------------t~i~~t~---~gs~~t~dg~---aty~w~~dfi~g~~gi~g~~~~s~~~~~~pn~fg~ 136 (309) T protein:vir:71 85 -----------------TRILRTN---IGSITSMDGN---ATYPWFTDFLLGMAGINGGMGTSCNRFYGPNAFGA 136 (309) T ss_pred -----------------hhhhcCC---cccccccCcc---cccccccchhhhhhhhhcccccccccccccchhhh Confidence 2222110 0111000000 00000 00 1111 122222222211 No 21 >protein:vir:103004 Length: 268 # NCBI annotation: gp109 # Family: family:all:1103 # MgeID: mge:1583 # MgeName: Syn9 # Cross-refs: genbank:acc:YP_717776;genbank:gi:113200738;genbank:GeneID:4239008 Probab=52.38 E-value=0.2 Score=24.46 Aligned_cols=94 Identities=13% Similarity=0.091 Sum_probs=53.8 Q ss_pred CchHHHHHHHHHHHhhhhc-ccCCCCHHHHHHHHHHHHHHHHhhcccccccCCCCCCCCCcccCCCHHHHHHHHHHHHHH Q lcl|NC_013599. 1 MTTVAEIIRDAFGHLRVLD-ANEAVEAEDATRAIRTLNLMMRRWEANGIALGWSEVASPDDLLPAPAEAEEAIGYNLAVR 79 (135) Q Consensus 1 mtTkgdlV~~AlrklgV~~-t~~~vepqs~~~gi~dLe~MMaeW~a~gi~iGy~e~~~PdDd~glp~~a~~Av~~nLA~r 79 (135) -.++.||..-+||+|| ++ .+..|+.+-+.|.|++==.+..||+.||..=+|- +...+|+.- T Consensus 6 ~~s~~eLkdyiLRrLG-aPii~InVtd~Qi~DcId~Alelf~EyHydG~~k~y~-~~~it~~~~---------------- 67 (268) T protein:vir:10 6 PASKTELKNYALRRLG-YPAIDINVCDEQLDDLVEEAIDYFQEYHYNGSYQSMM-KIEVTDAIK---------------- 67 (268) T ss_pred CCCHHHHHHHHHHhcC-CceEEEecCHHHHHHHHHHHHHHhhhhhccchhcceE-EEEechHHh---------------- Confidence 6789999999999999 88 8999999999999999999999999999998884 222222210 Q ss_pred HhhhhCCCCCHHHHHHHHHHHHHHHHHHhhccc-cccC--CC---CCCC--CCCCccc--------------------CC Q lcl|NC_013599. 80 LRAGYGVVLEQDVLNAAERGRAMLISDTVHASG-VRMQ--YA---LPAA--ESQRRYG--------------------SD 131 (135) Q Consensus 80 ia~dygie~~~~v~~~A~~~~~~L~sa~~~a~~-~~~~--~~---mP~g--~gnr~~~--------------------~~ 131 (135) + .| .+. .+.+ ..++ ++ +|-+ .-+++.+ +| T Consensus 68 --------------~---~g--~~~----t~~g~~~~~~~~~fi~~pp~v~gv~~vf~~~~~~~~~~~n~~~~~~q~~ln 124 (268) T protein:vir:10 68 --------------T---AA--QST----TQQGSTNWYENNNYVSLPPGVLGVNHVYTNIGASSVVPGNIFNIKYQIFLN 124 (268) T ss_pred --------------h---hh--hhc----ccCccccccccccceecCCceeehhhhhhcccccccccccccccchhhhhc Confidence 0 00 000 0000 0000 00 1100 0011111 11 Q ss_pred ccCC Q lcl|NC_013599. 132 GYDG 135 (135) Q Consensus 132 ~~~~ 135 (135) +..+ T Consensus 125 d~~~ 128 (268) T protein:vir:10 125 DIYA 128 (268) T ss_pred chhh Confidence 1111 No 22 >protein:vir:98189 Length: 307 # NCBI annotation: gp13 head completion # Family: family:all:1103 # MgeID: mge:1667 # MgeName: RB43 # Cross-refs: genbank:acc:YP_239190;genbank:gi:66391665;genbank:GeneID:3416291 Probab=51.48 E-value=0.098 Score=26.13 Aligned_cols=117 Identities=11% Similarity=0.115 Sum_probs=65.6 Q ss_pred Cch--HHHHHHHHHHHhhhhc-ccCCCCHHHHHHHHHHHHHHHHhhcccccccCCC-CCCCCCcccCCCHHHHHHHHHHH Q lcl|NC_013599. 1 MTT--VAEIIRDAFGHLRVLD-ANEAVEAEDATRAIRTLNLMMRRWEANGIALGWS-EVASPDDLLPAPAEAEEAIGYNL 76 (135) Q Consensus 1 mtT--kgdlV~~AlrklgV~~-t~~~vepqs~~~gi~dLe~MMaeW~a~gi~iGy~-e~~~PdDd~glp~~a~~Av~~nL 76 (135) |.| +.||..-+||+|| ++ .+..|+.+-+.|.|++==.+-.||+.||..=+|- .....+|..+ + T Consensus 1 m~t~s~~eLKdyiLRrLG-APvi~InVtd~Qi~DcId~ALqly~EyHydG~~k~y~~~~i~~d~~~~--------~---- 67 (307) T protein:vir:98 1 MITNNPEQLKDEILRRLG-APIIKIEITQDQIYDCIQRALDLYAEYHYNGTNKSYIILTLGEDNPRN--------V---- 67 (307) T ss_pred CCcCCHHHHHHHHHHhcC-CceeEEecCHHHHHHHHHHHHHHHHhhhcccccceeEEEEeccccccc--------c---- Confidence 655 6899999999999 88 8899999999999999999999999999998883 2233333111 0 Q ss_pred HHHHhhhhCCCCCHHHHHHHHHHHHHH-HHHHhhccccccCCC--CCCCC-----CCCcccCCccCC Q lcl|NC_013599. 77 AVRLRAGYGVVLEQDVLNAAERGRAML-ISDTVHASGVRMQYA--LPAAE-----SQRRYGSDGYDG 135 (135) Q Consensus 77 A~ria~dygie~~~~v~~~A~~~~~~L-~sa~~~a~~~~~~~~--mP~g~-----gnr~~~~~~~~~ 135 (135) -+-.+..+..-.+++.+..-+...+ -.++ -|-. .+.= ||-+. +++..+.|.+.. T Consensus 68 --~~~~~~~v~aVT~iirt~~g~~~s~dg~at--y~w~-~d~~~g~~~~~~g~~~~s~~~g~n~~g~ 129 (307) T protein:vir:98 68 --FDLSKEHIFAVTKVLRTNIGSLVSMDGTAV--YPWF-TDFLMGLTGGSLGGRCASSVYGMNAYGA 129 (307) T ss_pred --eecCCchHhHHHHHhhcCccceeccccccc--cccc-CcceeecCCcccccccccceecCccccc Confidence 0111222222222222211111000 0000 0111 1111 44322 346666777665 No 23 >protein:vir:98502 Length: 223 # NCBI annotation: hypothetical protein predicted by GeneMark # Family: family:all:1524 # MgeID: mge:1592 # MgeName: BMP-1 # Cross-refs: genbank:acc:NP_996576;genbank:gi:45569507;genbank:GeneID:2767830 Probab=46.68 E-value=0.73 Score=21.34 Aligned_cols=135 Identities=13% Similarity=0.040 Sum_probs=69.3 Q ss_pred CchHHHHHHHHHHHhhhhcc--cCCCCHHHHH--------HHHHHHHHHHHhhccc----------ccccCCC------- Q lcl|NC_013599. 1 MTTVAEIIRDAFGHLRVLDA--NEAVEAEDAT--------RAIRTLNLMMRRWEAN----------GIALGWS------- 53 (135) Q Consensus 1 mtTkgdlV~~AlrklgV~~t--~~~vepqs~~--------~gi~dLe~MMaeW~a~----------gi~iGy~------- 53 (135) |+|+=||.-.||.+||--.. ..+.+..+.+ +-+++--.=++.|.+- .-..||. T Consensus 1 M~S~v~IcN~AL~~lG~~~i~~~~s~~E~s~~A~~C~~~Y~~~r~~~Lr~~pW~FA~~r~~La~~a~p~~~~~yaY~LP~ 80 (223) T protein:vir:98 1 MASEVDICNLALAYLGDEATVAGINPPEGSVQAEYCARFYPFARDSLLELHTWGFATKCAQLAAMGISRPEWRFAYAQPA 80 (223) T ss_pred CCCHHHHHHHHHHhcccchhhcccCCCCCCHHHHHHHHhhHHHHHHHHhhcCchhHhhhhhhhhcccCCCCccccccccc Confidence 99999999999999995542 2233222222 2333333336677432 0011221 Q ss_pred ------------------------------------------------CCCCCCcccCCCHHHHHHHHHHHHHHHhhhhC Q lcl|NC_013599. 54 ------------------------------------------------EVASPDDLLPAPAEAEEAIGYNLAVRLRAGYG 85 (135) Q Consensus 54 ------------------------------------------------e~~~PdDd~glp~~a~~Av~~nLA~ria~dyg 85 (135) ++.+-.|..-.|+-|.+|+++.||.+||.-.- T Consensus 81 Dclrv~~v~~~~~~~~~~~~~~~~~~~~e~~~~g~~~i~td~~~~~l~Y~~~v~d~~~fd~lF~~Ala~~LAa~lA~pLt 160 (223) T protein:vir:98 81 DAIKIVAVLPHDAANIEAGIDNAQPFSCEIDNTGADIILTNQVNAVARYISLVKDTTKFSPLFVQALAWHLASMLAGPLL 160 (223) T ss_pred cceeeeeeccccccccccccccccceEEeeccccceeeeecCCceEEEEeecCCChhcccHHHHHHHHHHHHHHhhHhhc Confidence 01111245556889999999888888876432 Q ss_pred CCCCH-HHHHHHHHHHHHHHHHHhhccccccCCC-CCCCC------CCCcc-----cCCccCC Q lcl|NC_013599. 86 VVLEQ-DVLNAAERGRAMLISDTVHASGVRMQYA-LPAAE------SQRRY-----GSDGYDG 135 (135) Q Consensus 86 ie~~~-~v~~~A~~~~~~L~sa~~~a~~~~~~~~-mP~g~------gnr~~-----~~~~~~~ 135 (135) --.+- +........|+..+...+.+.+...+-. .+..+ +-+.+ --|||.| T Consensus 161 ~~~~~~q~a~~~~~~y~~~l~~A~~~da~e~~~~~~~~~~~l~aR~~~~~~~~~~~~~~~~~~ 223 (223) T protein:vir:98 161 KGDVGAAESKRCVGAMQAYLSQAMVSDANQRKTKPAHMPEWMRARGAGFVDGNIPGLPNGWRG 223 (223) T ss_pred CCcchHHHHHHHHHHHHHHHHHHHhcccccCcccccccchhhhhcccCCCCCCCCCCCccccC Confidence 22221 1122333566777766655554443311 22110 11111 3467777 No 24 >protein:vir:107429 Length: 223 # NCBI annotation: Bbp14 # Family: family:all:1524 # MgeID: mge:1537 # MgeName: BPP-1 # Cross-refs: genbank:acc:NP_958683;genbank:gi:41179375;genbank:GeneID:2717223 Probab=46.68 E-value=0.73 Score=21.34 Aligned_cols=135 Identities=13% Similarity=0.040 Sum_probs=69.3 Q ss_pred CchHHHHHHHHHHHhhhhcc--cCCCCHHHHH--------HHHHHHHHHHHhhccc----------ccccCCC------- Q lcl|NC_013599. 1 MTTVAEIIRDAFGHLRVLDA--NEAVEAEDAT--------RAIRTLNLMMRRWEAN----------GIALGWS------- 53 (135) Q Consensus 1 mtTkgdlV~~AlrklgV~~t--~~~vepqs~~--------~gi~dLe~MMaeW~a~----------gi~iGy~------- 53 (135) |+|+=||.-.||.+||--.. ..+.+..+.+ +-+++--.=++.|.+- .-..||. T Consensus 1 M~S~v~IcN~AL~~lG~~~i~~~~s~~E~s~~A~~C~~~Y~~~r~~~Lr~~pW~FA~~r~~La~~a~p~~~~~yaY~LP~ 80 (223) T protein:vir:10 1 MASEVDICNLALAYLGDEATVAGINPPEGSVQAEYCARFYPFARDSLLELHTWGFATKCAQLAAMGISRPEWRFAYAQPA 80 (223) T ss_pred CCCHHHHHHHHHHhcccchhhcccCCCCCCHHHHHHHHhhHHHHHHHHhhcCchhHhhhhhhhhcccCCCCccccccccc Confidence 99999999999999995542 2233222222 2333333336677432 0011221 Q ss_pred ------------------------------------------------CCCCCCcccCCCHHHHHHHHHHHHHHHhhhhC Q lcl|NC_013599. 54 ------------------------------------------------EVASPDDLLPAPAEAEEAIGYNLAVRLRAGYG 85 (135) Q Consensus 54 ------------------------------------------------e~~~PdDd~glp~~a~~Av~~nLA~ria~dyg 85 (135) ++.+-.|..-.|+-|.+|+++.||.+||.-.- T Consensus 81 Dclrv~~v~~~~~~~~~~~~~~~~~~~~e~~~~g~~~i~td~~~~~l~Y~~~v~d~~~fd~lF~~Ala~~LAa~lA~pLt 160 (223) T protein:vir:10 81 DAIKIVAVLPHDAANIEAGIDNAQPFSCEIDNTGADIILTNQVNAVARYISLVKDTTKFSPLFVQALAWHLASMLAGPLL 160 (223) T ss_pred cceeeeeeccccccccccccccccceEEeeccccceeeeecCCceEEEEeecCCChhcccHHHHHHHHHHHHHHhhHhhc Confidence 01111245556889999999888888876432 Q ss_pred CCCCH-HHHHHHHHHHHHHHHHHhhccccccCCC-CCCCC------CCCcc-----cCCccCC Q lcl|NC_013599. 86 VVLEQ-DVLNAAERGRAMLISDTVHASGVRMQYA-LPAAE------SQRRY-----GSDGYDG 135 (135) Q Consensus 86 ie~~~-~v~~~A~~~~~~L~sa~~~a~~~~~~~~-mP~g~------gnr~~-----~~~~~~~ 135 (135) --.+- +........|+..+...+.+.+...+-. .+..+ +-+.+ --|||.| T Consensus 161 ~~~~~~q~a~~~~~~y~~~l~~A~~~da~e~~~~~~~~~~~l~aR~~~~~~~~~~~~~~~~~~ 223 (223) T protein:vir:10 161 KGDVGAAESKRCVGAMQAYLSQAMVSDANQRKTKPAHMPEWMRARGAGFVDGNIPGLPNGWRG 223 (223) T ss_pred CCcchHHHHHHHHHHHHHHHHHHHhcccccCcccccccchhhhhcccCCCCCCCCCCCccccC Confidence 22221 1122333566777766655554443311 22110 11111 3467777 No 25 >protein:vir:107803 Length: 223 # NCBI annotation: hypothetical protein predicted by GeneMark # Family: family:all:1524 # MgeID: mge:1673 # MgeName: BIP-1 # Cross-refs: genbank:acc:NP_996624;genbank:gi:45580758;genbank:GeneID:2767879 Probab=46.68 E-value=0.73 Score=21.34 Aligned_cols=135 Identities=13% Similarity=0.040 Sum_probs=69.3 Q ss_pred CchHHHHHHHHHHHhhhhcc--cCCCCHHHHH--------HHHHHHHHHHHhhccc----------ccccCCC------- Q lcl|NC_013599. 1 MTTVAEIIRDAFGHLRVLDA--NEAVEAEDAT--------RAIRTLNLMMRRWEAN----------GIALGWS------- 53 (135) Q Consensus 1 mtTkgdlV~~AlrklgV~~t--~~~vepqs~~--------~gi~dLe~MMaeW~a~----------gi~iGy~------- 53 (135) |+|+=||.-.||.+||--.. ..+.+..+.+ +-+++--.=++.|.+- .-..||. T Consensus 1 M~S~v~IcN~AL~~lG~~~i~~~~s~~E~s~~A~~C~~~Y~~~r~~~Lr~~pW~FA~~r~~La~~a~p~~~~~yaY~LP~ 80 (223) T protein:vir:10 1 MASEVDICNLALAYLGDEATVAGINPPEGSVQAEYCARFYPFARDSLLELHTWGFATKCAQLAAMGISRPEWRFAYAQPA 80 (223) T ss_pred CCCHHHHHHHHHHhcccchhhcccCCCCCCHHHHHHHHhhHHHHHHHHhhcCchhHhhhhhhhhcccCCCCccccccccc Confidence 99999999999999995542 2233222222 2333333336677432 0011221 Q ss_pred ------------------------------------------------CCCCCCcccCCCHHHHHHHHHHHHHHHhhhhC Q lcl|NC_013599. 54 ------------------------------------------------EVASPDDLLPAPAEAEEAIGYNLAVRLRAGYG 85 (135) Q Consensus 54 ------------------------------------------------e~~~PdDd~glp~~a~~Av~~nLA~ria~dyg 85 (135) ++.+-.|..-.|+-|.+|+++.||.+||.-.- T Consensus 81 Dclrv~~v~~~~~~~~~~~~~~~~~~~~e~~~~g~~~i~td~~~~~l~Y~~~v~d~~~fd~lF~~Ala~~LAa~lA~pLt 160 (223) T protein:vir:10 81 DAIKIVAVLPHDAANIEAGIDNAQPFSCEIDNTGADIILTNQVNAVARYISLVKDTTKFSPLFVQALAWHLASMLAGPLL 160 (223) T ss_pred cceeeeeeccccccccccccccccceEEeeccccceeeeecCCceEEEEeecCCChhcccHHHHHHHHHHHHHHhhHhhc Confidence 01111245556889999999888888876432 Q ss_pred CCCCH-HHHHHHHHHHHHHHHHHhhccccccCCC-CCCCC------CCCcc-----cCCccCC Q lcl|NC_013599. 86 VVLEQ-DVLNAAERGRAMLISDTVHASGVRMQYA-LPAAE------SQRRY-----GSDGYDG 135 (135) Q Consensus 86 ie~~~-~v~~~A~~~~~~L~sa~~~a~~~~~~~~-mP~g~------gnr~~-----~~~~~~~ 135 (135) --.+- +........|+..+...+.+.+...+-. .+..+ +-+.+ --|||.| T Consensus 161 ~~~~~~q~a~~~~~~y~~~l~~A~~~da~e~~~~~~~~~~~l~aR~~~~~~~~~~~~~~~~~~ 223 (223) T protein:vir:10 161 KGDVGAAESKRCVGAMQAYLSQAMVSDANQRKTKPAHMPEWMRARGAGFVDGNIPGLPNGWRG 223 (223) T ss_pred CCcchHHHHHHHHHHHHHHHHHHHhcccccCcccccccchhhhhcccCCCCCCCCCCCccccC Confidence 22221 1122333566777766655554443311 22110 11111 3467777 No 26 >protein:vir:106428 Length: 306 # NCBI annotation: gp13 neck protein # Family: family:all:1103 # MgeID: mge:1474 # MgeName: Aeh1 # Cross-refs: genbank:acc:NP_944100;genbank:gi:38640144;genbank:GeneID:2658189 Probab=45.63 E-value=0.094 Score=26.22 Aligned_cols=111 Identities=12% Similarity=0.113 Sum_probs=59.8 Q ss_pred CchHHHHHHHHHHHhhhhc-ccCCCCHHHHHHHHHHHHHHHHhhcccccccCCCCCCCCCcccCCCHHHHHHHHHHHHHH Q lcl|NC_013599. 1 MTTVAEIIRDAFGHLRVLD-ANEAVEAEDATRAIRTLNLMMRRWEANGIALGWSEVASPDDLLPAPAEAEEAIGYNLAVR 79 (135) Q Consensus 1 mtTkgdlV~~AlrklgV~~-t~~~vepqs~~~gi~dLe~MMaeW~a~gi~iGy~e~~~PdDd~glp~~a~~Av~~nLA~r 79 (135) -.++.||..-+||+|| ++ .+..|+.+-+.|.|++==.+-.||+.||..=+|- +...+++. +...++ . T Consensus 7 ~~s~~eLkdyiLRrLG-APii~IeVtd~Qi~DcIdrAlely~EyHydG~~k~y~-~~~i~ed~-----~~~g~~-d---- 74 (306) T protein:vir:10 7 VRNPRELKDLILRRLG-APVIQVEVTEDHIYDSIGRALELYKEYHHDGLNKAYL-SVKLNQEQ-----AATGYI-D---- 74 (306) T ss_pred CCCHHHHHHHHHHhcC-CceEEEecCHHHHHHHHHHHHHHHhhhhccccccceE-EEEechhc-----ccCCeE-e---- Confidence 4589999999999999 88 8999999999999999999999999999988883 11112211 000000 0 Q ss_pred HhhhhCCCCCHHHHH-----------HHHHH-HHHHHHHHhhccccccCCCCCCCCCCCcccCCccCC Q lcl|NC_013599. 80 LRAGYGVVLEQDVLN-----------AAERG-RAMLISDTVHASGVRMQYALPAAESQRRYGSDGYDG 135 (135) Q Consensus 80 ia~dygie~~~~v~~-----------~A~~~-~~~L~sa~~~a~~~~~~~~mP~g~gnr~~~~~~~~~ 135 (135) + +..++..=.+|+- .|-+- +...+.++ ++.+. ++++...|.|-| T Consensus 75 ~-~~~~v~aVtkI~r~~~g~~~tm~Gna~~~~~q~FL~~l---------~~~~~--~~~~~g~~~~g~ 130 (306) T protein:vir:10 75 I-SAYPVFAITKIIRHKSMMWGGLGGGATLNFFTDFLTTL---------GGGPQ--GISYHGPFGALG 130 (306) T ss_pred c-CCccceeeeeeeccCcceeeeccccccccchhhhhhhh---------ccccc--chhhccchhhhh Confidence 0 1112222122211 01010 01111111 11111 234444444433 No 27 >protein:vir:104694 Length: 281 # NCBI annotation: T4-like neck protein # Family: family:all:1103 # MgeID: mge:1630 # MgeName: P-SSM2 # Cross-refs: genbank:acc:YP_214352;genbank:gi:61805992;genbank:GeneID:3294213 Probab=38.54 E-value=0.11 Score=25.88 Aligned_cols=120 Identities=5% Similarity=0.037 Sum_probs=55.8 Q ss_pred CchHHHHHHHHHHHhhhhc-ccCCCCHHHHHHHHHHHHHHHHhhcccccccCCC-CCCCCCcccCCCHHHHHHHHHHHHH Q lcl|NC_013599. 1 MTTVAEIIRDAFGHLRVLD-ANEAVEAEDATRAIRTLNLMMRRWEANGIALGWS-EVASPDDLLPAPAEAEEAIGYNLAV 78 (135) Q Consensus 1 mtTkgdlV~~AlrklgV~~-t~~~vepqs~~~gi~dLe~MMaeW~a~gi~iGy~-e~~~PdDd~glp~~a~~Av~~nLA~ 78 (135) -.++.||..-+||+|| ++ .+..|+.+-+.|.|++==.+..||+.||..=+|- .....+|. ..++ T Consensus 4 p~s~~eLkdyiLRrLG-APii~InVtd~Qi~DcId~Alely~EyHydG~~k~y~~~~i~~d~~-------~~g~------ 69 (281) T protein:vir:10 4 PASRQQLIDYCLRKLG-APVLEINLDDDQIDDSVDDAIQLFNERHFDGVERMFLKYKITQADL-------DRGR------ 69 (281) T ss_pred CCCHHHHHHHHHHhcC-CceEEEEcCHHHHHHHHHHHHHHhhhhcccccccceEEEEechhhh-------hcce------ Confidence 5578999999999999 88 8999999999999999999999999999988883 12222221 0000 Q ss_pred HHhhhhCCCCCHHHHHH-------HHHHHHH---HHHHHhhccccccCCCCCCCCC---CCcc--------cCCccCC Q lcl|NC_013599. 79 RLRAGYGVVLEQDVLNA-------AERGRAM---LISDTVHASGVRMQYALPAAES---QRRY--------GSDGYDG 135 (135) Q Consensus 79 ria~dygie~~~~v~~~-------A~~~~~~---L~sa~~~a~~~~~~~~mP~g~g---nr~~--------~~~~~~~ 135 (135) --.++..+-+..+++.+ |-+.... .+.-.....++..-++ +.+++ |.+. ..=.|+. T Consensus 70 ~d~~~~~~~avt~i~~t~~~~~G~at~~w~~~~ny~~~p~~v~G~~~~~g-~~s~~~~~~~f~~~yq~~lndly~~~~ 146 (281) T protein:vir:10 70 AKGTDGVGIVTTTATSTNIAGYGTTTSSWYETSNFLQVPDSVVGIEKIFK-FDTSTISGGMFSIKYQLFLNDLYNFNS 146 (281) T ss_pred eeecCcceeEEEeeeccccccccccccchhhcccceecCccceeeeeecc-ccccccCcceeecchhhhhhhhccCCc Confidence 00111111111111110 0111100 0000000111111111 11110 0000 0000000 No 28 >protein:vir:5657 Length: 307 # NCBI annotation: gp13 # Family: family:all:1103 # MgeID: mge:119 # MgeName: KVP40 # Cross-refs: genbank:acc:NP_899596;genbank:gi:34419583;genbank:GeneID:2545698 Probab=37.25 E-value=0.28 Score=23.58 Aligned_cols=109 Identities=14% Similarity=0.137 Sum_probs=57.8 Q ss_pred CchHHHHHHHHHHHhhhhc-ccCCCCHHHHHHHHHHHHHHHHhhcccccccCCC-CCCCCCcc----cCCCHHHHHHHHH Q lcl|NC_013599. 1 MTTVAEIIRDAFGHLRVLD-ANEAVEAEDATRAIRTLNLMMRRWEANGIALGWS-EVASPDDL----LPAPAEAEEAIGY 74 (135) Q Consensus 1 mtTkgdlV~~AlrklgV~~-t~~~vepqs~~~gi~dLe~MMaeW~a~gi~iGy~-e~~~PdDd----~glp~~a~~Av~~ 74 (135) -.++.||..-+||+|| ++ .+..|+.+-+.|.|++==.+..||+.||..=+|- .....++. +-++.. +.|| T Consensus 6 ~~s~~eLkdyiLRrLG-APvi~InVtd~Qi~DcId~Alqly~EyHydG~~k~y~~~~vte~~~~~G~~d~~~~-v~av-- 81 (307) T protein:vir:56 6 ATSPREMKDLILRRLG-APIVNVEVSEDQVYDCISRALELYIEYHPDGVNKTYSIISLSEEQAQTGIIDLDIP-ATAI-- 81 (307) T ss_pred CCCHHHHHHHHHHhcC-CceEEEecCHHHHHHHHHHHHHHhhhhhccccccceEEEEechhhccCCeEecCcc-hhhh-- Confidence 6789999999999999 88 8899999999999999999999999999988883 11122210 112221 2222 Q ss_pred HHHHHHhhhhCCCCCHHHHHHHHHHHHHHHHHHhhccccccCC------CCCCCCCC----CcccCCccCC Q lcl|NC_013599. 75 NLAVRLRAGYGVVLEQDVLNAAERGRAMLISDTVHASGVRMQY------ALPAAESQ----RRYGSDGYDG 135 (135) Q Consensus 75 nLA~ria~dygie~~~~v~~~A~~~~~~L~sa~~~a~~~~~~~------~mP~g~gn----r~~~~~~~~~ 135 (135) .+|+.+- ..+.+. --.+.++. .|+...|. +.+..+-..+ T Consensus 82 ---------------t~Iirt~----~s~~t~---dg~aty~w~tdfi~~~~gv~g~~~~~~~~~~~~~~~ 130 (307) T protein:vir:56 82 ---------------TKILRAE----SSFFTM---DGNATYSWFSDFLQGLAGGPGAGSCNSYHQGMLGQG 130 (307) T ss_pred ---------------hhhhccC----cccccC---CCccccCccccceecccccccccceeeecccccchh Confidence 1222110 111000 00000110 01222111 1222111111 No 29 >protein:vir:103760 Length: 207 # NCBI annotation: hypothetical protein # Family: family:all:1524 # MgeID: mge:1645 # MgeName: BcepC6B # Cross-refs: genbank:acc:YP_024931;genbank:gi:48697201;genbank:GeneID:2846084 Probab=36.19 E-value=1.2 Score=20.18 Aligned_cols=130 Identities=15% Similarity=0.177 Sum_probs=74.5 Q ss_pred CchHHHHHHHHHHHhhhhcccCCCCHHHHH--------HHHHHHHHHHHhhccc-----------ccccCCC-------- Q lcl|NC_013599. 1 MTTVAEIIRDAFGHLRVLDANEAVEAEDAT--------RAIRTLNLMMRRWEAN-----------GIALGWS-------- 53 (135) Q Consensus 1 mtTkgdlV~~AlrklgV~~t~~~vepqs~~--------~gi~dLe~MMaeW~a~-----------gi~iGy~-------- 53 (135) |+|+=||.-.||.+|| .++..+.+.++-+ +.+.+--.=++.|.+- .-..||. T Consensus 1 M~S~v~IcN~AL~~lG-a~~I~s~~e~s~~A~~c~~~Y~~~r~~~L~~~pW~FA~~r~~La~~~~~P~~~~~yaY~LP~D 79 (207) T protein:vir:10 1 MASQVGICNRALTKIG-DKRITSLDEDSKAAATLNSMYDDVLDACLRAHVWSFTKARAQLAALAEAPLFGFSYQYRLPTD 79 (207) T ss_pred CCCHHHHHHHHHHhhc-hhhhcccccCCHHHHHHHHhhHHHHHHHHhccChhhHhhhhhhcccccCCCCCCcccccCccc Confidence 9999999999999999 5555555433322 3344444456677432 0111221 Q ss_pred -----CC-----------------------------------CCCCcccCCCHHHHHHHHHHHHHHHhhhhCCCCCHHHH Q lcl|NC_013599. 54 -----EV-----------------------------------ASPDDLLPAPAEAEEAIGYNLAVRLRAGYGVVLEQDVL 93 (135) Q Consensus 54 -----e~-----------------------------------~~PdDd~glp~~a~~Av~~nLA~ria~dygie~~~~v~ 93 (135) ++ .+-.|..-.|+-|.+|+++.||-+||... --+.... T Consensus 80 clrv~~v~~~~~~~~~~~~~~~~v~g~~ll~~~~~~~~l~Y~~~v~d~~~fd~~F~~ala~~LAa~lA~pL--t~~~~~~ 157 (207) T protein:vir:10 80 FIRLLQVGQFDVYPRTDTRGLFSIENGNILTDMQAPLYIRYAKRVTDPNAMDALFREAFACRLAAEACESL--TQSATKR 157 (207) T ss_pred ceEeeeecCCCCccccccccceEecCCeEEecCCCcEEEEEeecCCChhhhhHHHHHHHHHHHHHHhhHhh--cCChHHH Confidence 00 01123445688999999999999998764 4556677 Q ss_pred HHHHHHHHHHHHHHhhccccccCCCCCCCCCC---CcccCCccCC Q lcl|NC_013599. 94 NAAERGRAMLISDTVHASGVRMQYALPAAESQ---RRYGSDGYDG 135 (135) Q Consensus 94 ~~A~~~~~~L~sa~~~a~~~~~~~~mP~g~gn---r~~~~~~~~~ 135 (135) ..+...|+..+...+.+.+...+-. |..... -|. .--+-| T Consensus 158 ~~~~q~~~~~l~~A~~~da~e~~~~-~~~~~~~l~aR~-~~~~~~ 200 (207) T protein:vir:10 158 QGAWAEHDQAIAAAIRVNAIERPAQ-PLGDDTWLESRN-GVAFPG 200 (207) T ss_pred HHHHHHHHHHHHHHHhcccccCccc-ccCCcchhhhcc-cccccc Confidence 7788888888877666655544322 222111 010 011112 No 30 >protein:vir:7328 Length: 201 # NCBI annotation: hypothetical protein # Family: family:all:1524 # MgeID: mge:143 # MgeName: epsilon15 # Cross-refs: genbank:acc:NP_848219;genbank:gi:30387390;genbank:GeneID:2641866 Probab=22.83 E-value=2.4 Score=18.51 Aligned_cols=125 Identities=19% Similarity=0.175 Sum_probs=70.1 Q ss_pred CchHHHHHHHHHHHhhhhcccCCCCHHHHH--------HHHHHHHHHHHhhccc----------ccccCCC--------- Q lcl|NC_013599. 1 MTTVAEIIRDAFGHLRVLDANEAVEAEDAT--------RAIRTLNLMMRRWEAN----------GIALGWS--------- 53 (135) Q Consensus 1 mtTkgdlV~~AlrklgV~~t~~~vepqs~~--------~gi~dLe~MMaeW~a~----------gi~iGy~--------- 53 (135) |+|+=||.-.||.+||=+.+....+.++-+ +-+++--.=++.|.+- .-.-||. T Consensus 1 M~S~v~IcN~AL~~iG~a~~I~s~~e~s~~A~~c~~~Y~~~r~~~Lr~~pW~FA~~r~~La~~a~~p~~~~yaY~LP~Dc 80 (201) T protein:vir:73 1 MASVIEICNRALSNIGNSRSINSLIEASKEAGQCSLHFDACRDAALADFDWNFATKRVALADTNNPPPDWQYAYQYPSDC 80 (201) T ss_pred CCCHHHHHHHHHHhhcCcccccccccCCHHHHHHHHhhHHHHHHHHhhcCchhHhhhhhhhhcccCCCCCcccccccccc Confidence 999999999999999955444444333322 2233333336777432 0001220 Q ss_pred ---------------------------------------------CCCCCCcccCCCHHHHHHHHHHHHHHHhhhhCCCC Q lcl|NC_013599. 54 ---------------------------------------------EVASPDDLLPAPAEAEEAIGYNLAVRLRAGYGVVL 88 (135) Q Consensus 54 ---------------------------------------------e~~~PdDd~glp~~a~~Av~~nLA~ria~dygie~ 88 (135) ++.+..|..-.|+-|.+|+++.||.+||.. +-- T Consensus 81 lrv~~v~~~~~~~~~~~~~~~~~~~~~~~ieg~~i~td~~~~~l~Y~~~v~d~~~fd~lF~~ala~~LAa~lA~p--lt~ 158 (201) T protein:vir:73 81 VRITEIMPTGIRNPTAAQRIEYVVGSNEDLTGKLIYTDQPKAWLKYMARVTDVNMYDAIFMEALSWRLAAAINMA--LTG 158 (201) T ss_pred eeeeeeccccccccccccccchhccccccccCCEeeecCCceeEEEeecCCCcccccHHHHHHHHHHHHHHhhHh--hcC Confidence 112223556679999999999999999864 334 Q ss_pred CHHHHHHHHHHHHHHHHHHhhccccccCCCCCCCCCCCcccCCccCC Q lcl|NC_013599. 89 EQDVLNAAERGRAMLISDTVHASGVRMQYALPAAESQRRYGSDGYDG 135 (135) Q Consensus 89 ~~~v~~~A~~~~~~L~sa~~~a~~~~~~~~mP~g~gnr~~~~~~~~~ 135 (135) +......+...|+..+...+.......+-..+... .|-. T Consensus 159 ~~~~~~~~~q~~~~~~~~A~~~d~~e~~~~~~~~~--------~~l~ 197 (201) T protein:vir:73 159 SADLGNNALTMYNRVILSAGSHSQNESQEPQPPVD--------EFTA 197 (201) T ss_pred ChHHHHHHHHHHHHHHHHHHHhhhccccCCCCCCc--------hHHH Confidence 45566667777777665554444444332211111 1111 No 31 >protein:vir:1780 Length: 67 # NCBI annotation: tail protein B # Family: family:all:824 # MgeID: mge:38 # MgeName: P60 # Cross-refs: genbank:acc:NP_570346;genbank:gi:18640505;genbank:GeneID:932718 Probab=20.65 E-value=2.4 Score=18.48 Aligned_cols=59 Identities=12% Similarity=0.038 Sum_probs=40.5 Q ss_pred CchHHHHHHHHHHHhhhhc-ccCCCCHHHHHHHHHHHHHHHHhhccccc--ccCCCCCCCCC Q lcl|NC_013599. 1 MTTVAEIIRDAFGHLRVLD-ANEAVEAEDATRAIRTLNLMMRRWEANGI--ALGWSEVASPD 59 (135) Q Consensus 1 mtTkgdlV~~AlrklgV~~-t~~~vepqs~~~gi~dLe~MMaeW~a~gi--~iGy~e~~~Pd 59 (135) .+|.=|-|-.-||.+|=.+ +.-+..-.++..+-+.|+....+-|..|- ..-+..+..|| T Consensus 6 ~~teLdAVN~~L~aIGesPV~sld~~npdva~a~~iL~~v~~~vqseGW~FNte~~~~ltPd 67 (67) T protein:vir:17 6 RTSELDALNVKMTNIGQQPIVNINNTNPQVALAKTVLNQVTSDVLTEGWIFNRELDYPLTPQ 67 (67) T ss_pred ccchhhHHHHHHHhhCccccccccCCCccHHHHHHHHHHHHHHHhhCCceeeccCceeecCC Confidence 7788888999999999776 33345455899999999999988765441 11123344455 Done!