Query lcl|NC_012884.1_cdsid_YP_002995467.1 [gene=M102_gp10] [protein=hypothetical protein] [protein_id=YP_002995467.1] [location=6897..7253] Match_columns 118 No_of_seqs 31 out of 34 Neff 4.9 Searched_HMMs 1612 Date Thu Nov 7 12:39:17 2013 Command /home/guerois/workspace/virfam/python/lib/hhsearch//hhsearch2 -i .//seq/seq_10 -d /home/guerois/workspace/virfam/python/profile_database/capsid_neck_tail.hhm -glob -cpu 7 -o .//seq/HHR/seq_10_vs_rec_db.hhr No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM 1 protein:vir:4860 Length: 123 # 100.0 3.5E-55 2.1E-58 319.2 14.6 118 1-118 1-120 (123) 2 protein:vir:4834 Length: 123 # 100.0 4.7E-55 2.9E-58 318.4 14.6 118 1-118 1-120 (123) 3 protein:vir:100888 Length: 123 100.0 1.6E-54 9.8E-58 315.5 14.0 118 1-118 1-120 (123) 4 protein:vir:5001 Length: 123 # 100.0 5.6E-54 3.4E-57 312.5 14.3 118 1-118 1-120 (123) 5 protein:vir:100200 Length: 123 100.0 2.6E-53 1.6E-56 308.9 14.2 118 1-118 1-120 (123) 6 protein:vir:1088 Length: 131 # 100.0 2.2E-51 1.4E-54 298.3 14.2 118 1-118 1-122 (131) 7 protein:vir:1029 Length: 131 # 100.0 4.4E-50 2.8E-53 291.2 14.2 117 1-118 2-122 (131) 8 protein:vir:3995 Length: 131 # 100.0 4.5E-50 2.8E-53 291.1 14.2 117 1-118 2-122 (131) 9 protein:vir:7413 Length: 131 # 100.0 4.3E-49 2.7E-52 285.7 14.0 117 1-118 1-122 (131) 10 protein:vir:3849 Length: 123 # 99.8 6.8E-22 4.2E-25 136.6 7.3 115 1-118 1-117 (123) 11 protein:vir:78648 Length: 131 98.4 1.9E-09 1.2E-12 68.4 7.4 114 1-118 1-119 (131) 12 protein:vir:96972 Length: 131 98.4 1.9E-09 1.2E-12 68.4 7.4 114 1-118 1-119 (131) 13 protein:vir:9364 Length: 131 # 98.4 1.9E-09 1.2E-12 68.4 7.4 114 1-118 1-119 (131) 14 protein:vir:2689 Length: 131 # 98.4 1.9E-09 1.2E-12 68.4 7.4 114 1-118 1-119 (131) 15 protein:vir:94418 Length: 131 98.4 2.2E-09 1.4E-12 68.0 7.3 114 1-118 1-128 (131) 16 protein:vir:93902 Length: 131 98.4 3.1E-09 1.9E-12 67.2 7.5 114 1-118 1-128 (131) 17 protein:vir:1274 Length: 162 # 98.1 7.5E-08 4.7E-11 59.6 9.4 117 1-118 39-156 (162) 18 protein:vir:9709 Length: 141 # 98.0 2.7E-08 1.7E-11 62.1 6.6 112 1-118 1-134 (141) 19 protein:vir:80001 Length: 126 97.6 1E-06 6.4E-10 53.4 8.7 111 4-118 1-117 (126) 20 protein:vir:81093 Length: 126 97.6 1E-06 6.4E-10 53.4 8.7 111 4-118 1-117 (126) 21 protein:vir:102888 Length: 119 97.4 7.4E-06 4.6E-09 48.7 11.3 109 1-118 2-116 (119) 22 protein:vir:102086 Length: 119 97.4 7.4E-06 4.6E-09 48.7 11.3 109 1-118 2-116 (119) 23 protein:vir:107581 Length: 119 97.4 7.4E-06 4.6E-09 48.7 11.3 109 1-118 2-116 (119) 24 protein:vir:105008 Length: 119 97.4 7.4E-06 4.6E-09 48.7 11.3 109 1-118 2-116 (119) 25 protein:vir:98343 Length: 126 97.4 3.2E-06 2E-09 50.7 9.0 110 4-118 1-117 (126) 26 protein:vir:9415 Length: 126 # 97.4 3.2E-06 2E-09 50.7 9.0 110 4-118 1-117 (126) 27 protein:vir:78349 Length: 127 97.3 3.3E-06 2.1E-09 50.6 8.0 114 1-118 2-121 (127) 28 protein:vir:1387 Length: 116 # 96.3 7E-05 4.3E-08 43.4 8.5 107 1-118 4-112 (116) 29 protein:vir:96002 Length: 133 96.2 7.6E-05 4.7E-08 43.2 8.1 112 1-118 2-124 (133) 30 protein:vir:9514 Length: 135 # 94.2 0.00061 3.8E-07 38.2 7.0 112 1-118 2-125 (135) 31 protein:vir:100675 Length: 135 94.2 0.00061 3.8E-07 38.2 7.0 112 1-118 2-125 (135) 32 protein:vir:101303 Length: 135 94.2 0.00061 3.8E-07 38.2 7.0 112 1-118 2-125 (135) 33 protein:vir:9648 Length: 126 # 86.3 0.011 6.5E-06 31.4 5.9 114 1-118 2-119 (126) 34 protein:vir:98629 Length: 126 75.3 0.05 3.1E-05 27.7 5.6 110 1-118 2-115 (126) 35 protein:vir:1892 Length: 121 # 60.2 0.31 0.00019 23.4 6.7 110 1-117 1-121 (121) 36 protein:vir:93602 Length: 114 52.7 0.55 0.00034 22.0 9.0 111 1-118 1-113 (114) 37 protein:vir:4348 Length: 121 # 38.9 1 0.00065 20.5 7.3 110 1-117 1-121 (121) 38 protein:vir:3874 Length: 114 # 25.2 2.1 0.0013 18.8 7.4 108 1-111 1-114 (114) 39 protein:vir:1438 Length: 115 # 23.8 1.3 0.00081 20.0 3.8 105 1-118 1-110 (115) 40 protein:vir:97070 Length: 118 22.8 2.4 0.0015 18.5 7.8 112 1-118 1-116 (118) No 1 >protein:vir:4860 Length: 123 # NCBI annotation: putative tail component protein # Family: family:all:1192 # MgeID: mge:106 # MgeName: DT1 # Cross-refs: genbank:acc:NP_049400;genbank:gi:9632428;genbank:GeneID:1258518 Probab=100.00 E-value=3.5e-55 Score=319.16 Aligned_cols=118 Identities=26% Similarity=0.368 Sum_probs=116.7 Q ss_pred CchHHHHHHHH--hCCccchhhhcCCCCCceEcCCceeEEEEEecccCcccccCCeeeeEEEEEEEEEEEeccCCCCHHH Q lcl|NC_012884. 1 MSLVSDVKNIL--LSTGKIDKVFIDNLPPQKTIDENITFAILSRAGVSLREFGNDKVNIISHEADVLISAKSDIDFDLEE 78 (118) Q Consensus 1 m~~V~d~~~~i--~~~~wiD~vy~~~iP~e~~~~~d~T~vLite~~~~p~~ygN~~f~~~~~~veIQIFyk~~~~~d~~~ 78 (118) |++|.+|++|| .+++|||+||+++||+|+++++|+|+|||||+.++|++|||++|+++.+|||||||||+++++|+++ T Consensus 1 m~pv~~v~~li~~~~~~~iD~vy~~~Ip~e~~~~~d~T~vLiTe~~~~~~~ygnn~f~~~~~~vEVQIFyk~~~~~di~~ 80 (123) T protein:vir:48 1 MLATVKLKELIEGKGFGEISEVYANNLPKELEDNTDKTIVLLTESNPSLDLSGNNTFFSKTDRVEVQIFYKLDIDFDIEA 80 (123) T ss_pred CccHHHHHHHHHhcCCCcceeeeecCCCcceecCCceEEEEEecccCCcccccCceeeeEEEEEEEEEEeecCCCcCHHH Confidence 99999999999 4679999999999999999999999999999999999999999999999999999999999999999 Q ss_pred HHHHHHHHHhcCCCeEEecCCCcCCCCcceEEEEEEEEeC Q lcl|NC_012884. 79 LESELYSKIFDDNYLISSSTGFIVDDETKHYELRLKVTKE 118 (118) Q Consensus 79 ~E~~L~k~f~~ngW~i~~s~~h~~DPdT~Q~t~tfyv~K~ 118 (118) ||++|||+|++|||+|++|++|++||||+|.++||||+|. T Consensus 81 ~E~~L~~~l~~~~W~i~~s~~h~~DPdT~Q~t~tfy~~k~ 120 (123) T protein:vir:48 81 FEMELIKFLKSEHYSITDIREHSIDPDTLQLTAVFFVAFD 120 (123) T ss_pred HHHHHHHHHhhCCceEEecCCCcCCCCCCeEEEEEEEEee Confidence 9999999999999999999999999999999999999999 No 2 >protein:vir:4834 Length: 123 # NCBI annotation: ORF30 # Family: family:all:1192 # MgeID: mge:105 # MgeName: 7201 # Cross-refs: genbank:acc:NP_038331;genbank:gi:9634657;genbank:GeneID:1262620 Probab=100.00 E-value=4.7e-55 Score=318.44 Aligned_cols=118 Identities=26% Similarity=0.381 Sum_probs=116.7 Q ss_pred CchHHHHHHHH--hCCccchhhhcCCCCCceEcCCceeEEEEEecccCcccccCCeeeeEEEEEEEEEEEeccCCCCHHH Q lcl|NC_012884. 1 MSLVSDVKNIL--LSTGKIDKVFIDNLPPQKTIDENITFAILSRAGVSLREFGNDKVNIISHEADVLISAKSDIDFDLEE 78 (118) Q Consensus 1 m~~V~d~~~~i--~~~~wiD~vy~~~iP~e~~~~~d~T~vLite~~~~p~~ygN~~f~~~~~~veIQIFyk~~~~~d~~~ 78 (118) |++|.+|++|| .+++|||+||+++||+|+++++|+|+|||||+.++|++|||++|+++++|||||||||+++++|+++ T Consensus 1 m~pv~~v~~li~~~~~~~iD~vy~~~Ip~e~~~~~d~T~vLiTe~~~~~~~ygnn~f~~~~~~vEVQIFyk~~~~~di~~ 80 (123) T protein:vir:48 1 MLATVKLKELIEGKGFGEISEVYANNLPKELEENTDKTIVLLTESNPSLDLSGNNTFFSKTDRVEVQIFYKADIDFDIEA 80 (123) T ss_pred CccHHHHHHHHHhcCCCcceeeeccCCCcceecCCceEEEEEecccCCcccccCceeeeEEEEEEEEEEeecCCCcCHHH Confidence 99999999999 5679999999999999999999999999999999999999999999999999999999999999999 Q ss_pred HHHHHHHHHhcCCCeEEecCCCcCCCCcceEEEEEEEEeC Q lcl|NC_012884. 79 LESELYSKIFDDNYLISSSTGFIVDDETKHYELRLKVTKE 118 (118) Q Consensus 79 ~E~~L~k~f~~ngW~i~~s~~h~~DPdT~Q~t~tfyv~K~ 118 (118) ||++|||+|++|||+|++|++|++||||+|.++||||+|. T Consensus 81 ~Ei~L~~~~~~~~W~i~~s~~h~~DPdT~Q~t~t~y~~k~ 120 (123) T protein:vir:48 81 FEMELLKFLKSEHYSITDMREHSIDPDTLQITAVFFVAFD 120 (123) T ss_pred HHHHHHHHHhhCCceEEecCCCcCCCCCCeEEEEEEEEec Confidence 9999999999999999999999999999999999999999 No 3 >protein:vir:100888 Length: 123 # NCBI annotation: putative tail component # Family: family:all:1192 # MgeID: mge:1473 # MgeName: Lc-Nu # Cross-refs: genbank:acc:YP_358768;genbank:gi:77999994;genbank:GeneID:3726159 Probab=100.00 E-value=1.6e-54 Score=315.53 Aligned_cols=118 Identities=20% Similarity=0.245 Sum_probs=116.7 Q ss_pred CchHHHHHHHH--hCCccchhhhcCCCCCceEcCCceeEEEEEecccCcccccCCeeeeEEEEEEEEEEEeccCCCCHHH Q lcl|NC_012884. 1 MSLVSDVKNIL--LSTGKIDKVFIDNLPPQKTIDENITFAILSRAGVSLREFGNDKVNIISHEADVLISAKSDIDFDLEE 78 (118) Q Consensus 1 m~~V~d~~~~i--~~~~wiD~vy~~~iP~e~~~~~d~T~vLite~~~~p~~ygN~~f~~~~~~veIQIFyk~~~~~d~~~ 78 (118) |++|++++++| .+++|||+||+++||||+++++++|+|||||+.++|++|||++|+++++|||||||||+++++|+++ T Consensus 1 M~~v~~v~~ll~~~~~~~iD~vy~~~Ip~e~~~~~d~T~vLiTe~~~~~~~ygn~~f~~~~~~VeIQIFy~~~~~~di~~ 80 (123) T protein:vir:10 1 MSAVSDAVTMLSQAGITSIDAVEGNNLPQELVDSLEKTVVLITDAANDPTAHGDNDFWALNQEVEVQIWYSKLLDSDPEA 80 (123) T ss_pred CCcHHHHHHHHHhcCCCcceeeeecCCCcccccCCceeEEEEeccCCCcccccCCceeeeeeEEEEEEEeccCCCCCHHH Confidence 99999999999 4679999999999999999999999999999999999999999999999999999999999999999 Q ss_pred HHHHHHHHHhcCCCeEEecCCCcCCCCcceEEEEEEEEeC Q lcl|NC_012884. 79 LESELYSKIFDDNYLISSSTGFIVDDETKHYELRLKVTKE 118 (118) Q Consensus 79 ~E~~L~k~f~~ngW~i~~s~~h~~DPdT~Q~t~tfyv~K~ 118 (118) +|++|||+|+++||+|+++++|++||||+|+++||||+|. T Consensus 81 ~E~~l~~~l~~~~W~i~~s~~h~~DPdT~Q~~~t~y~~k~ 120 (123) T protein:vir:10 81 IEIAMMKAFTHQHWQVAAVRQRTLDPDTQQLFNTFYFSRT 120 (123) T ss_pred HHHHHHHHHhcCCcEEEeCCCCcCCCCCCeEEEEEEEEee Confidence 9999999999999999999999999999999999999999 No 4 >protein:vir:5001 Length: 123 # NCBI annotation: putative tail component protein # Family: family:all:1192 # MgeID: mge:109 # MgeName: Sfi21 # Cross-refs: genbank:acc:NP_049975;genbank:gi:9632947;genbank:GeneID:1262110 Probab=100.00 E-value=5.6e-54 Score=312.55 Aligned_cols=118 Identities=25% Similarity=0.381 Sum_probs=116.7 Q ss_pred CchHHHHHHHH--hCCccchhhhcCCCCCceEcCCceeEEEEEecccCcccccCCeeeeEEEEEEEEEEEeccCCCCHHH Q lcl|NC_012884. 1 MSLVSDVKNIL--LSTGKIDKVFIDNLPPQKTIDENITFAILSRAGVSLREFGNDKVNIISHEADVLISAKSDIDFDLEE 78 (118) Q Consensus 1 m~~V~d~~~~i--~~~~wiD~vy~~~iP~e~~~~~d~T~vLite~~~~p~~ygN~~f~~~~~~veIQIFyk~~~~~d~~~ 78 (118) |++|.+|++|| .+++|||+||+++||+|.++++|+|+|||||+.++|++|||++|+++++|||||||||+++++|+++ T Consensus 1 M~pv~~v~~ll~a~~~~~iD~vy~~~IP~e~~~~~d~T~vLiTe~~~~~~~ygnn~f~~~~~~VeIQIFYk~~~~~di~~ 80 (123) T protein:vir:50 1 MLATVKLKELIDGKGFGEINEVYANNLPRELEENTDKTIVLLTESNPSIDLSGNNTFFGKTERVEIQIFYKADIDFDIEA 80 (123) T ss_pred CccHHHHHHHHHhcCCCcceeeeecCCCcccccCCceeEEEEEcccCCcccccCceeeeEEEEEEEEEEeecCCCCCHHH Confidence 99999999999 4679999999999999999999999999999999999999999999999999999999999999999 Q ss_pred HHHHHHHHHhcCCCeEEecCCCcCCCCcceEEEEEEEEeC Q lcl|NC_012884. 79 LESELYSKIFDDNYLISSSTGFIVDDETKHYELRLKVTKE 118 (118) Q Consensus 79 ~E~~L~k~f~~ngW~i~~s~~h~~DPdT~Q~t~tfyv~K~ 118 (118) +|++||++|++|||+|++|++|++||||+|+++||||+|. T Consensus 81 ~E~~L~~~f~~ngW~i~~s~~h~~DPdT~Q~~~t~y~~k~ 120 (123) T protein:vir:50 81 FETELLKFLTSEHYSIIDMREHSIDPDTLQLTAVFFVALD 120 (123) T ss_pred HHHHHHHHHhhCCceEEecCCCcCCCCCCeEEEEEEEEee Confidence 9999999999999999999999999999999999999999 No 5 >protein:vir:100200 Length: 123 # NCBI annotation: putative tail component # Family: family:all:1192 # MgeID: mge:1524 # MgeName: phi AT3 # Cross-refs: genbank:acc:YP_025035;genbank:gi:48697268;genbank:GeneID:2948298 Probab=100.00 E-value=2.6e-53 Score=308.87 Aligned_cols=118 Identities=19% Similarity=0.291 Sum_probs=116.8 Q ss_pred CchHHHHHHHH--hCCccchhhhcCCCCCceEcCCceeEEEEEecccCcccccCCeeeeEEEEEEEEEEEeccCCCCHHH Q lcl|NC_012884. 1 MSLVSDVKNIL--LSTGKIDKVFIDNLPPQKTIDENITFAILSRAGVSLREFGNDKVNIISHEADVLISAKSDIDFDLEE 78 (118) Q Consensus 1 m~~V~d~~~~i--~~~~wiD~vy~~~iP~e~~~~~d~T~vLite~~~~p~~ygN~~f~~~~~~veIQIFyk~~~~~d~~~ 78 (118) ||+|.+|+++| .+++|||+||+++||||+++++++|+|||||+.++|++|||++|+++++|||||||||+++++|+++ T Consensus 1 M~~v~~v~~ll~~~~~~~iD~vy~~~Ip~e~~~~~~~T~vLiTe~~~~~~~ygnn~f~~~~~~VeIQIfY~~~~~~d~~~ 80 (123) T protein:vir:10 1 MSAVDDAVTVLNQAHIAGIDAIYGNNLPKSELDNVNKTVVLVTDSADDPPSFGNNDFWSLNQEVELQIWYAQLLDSDTEA 80 (123) T ss_pred CCcHHHHHHHHHhcCCCccceeeecCCCcccccCCceeEEEEeccCCCcccccCCceeeeEEEEEEEEEeccCCCCCHHH Confidence 99999999999 5789999999999999999999999999999999999999999999999999999999999999999 Q ss_pred HHHHHHHHHhcCCCeEEecCCCcCCCCcceEEEEEEEEeC Q lcl|NC_012884. 79 LESELYSKIFDDNYLISSSTGFIVDDETKHYELRLKVTKE 118 (118) Q Consensus 79 ~E~~L~k~f~~ngW~i~~s~~h~~DPdT~Q~t~tfyv~K~ 118 (118) +|++||++|++|||++++|++|++||||+|+++||||+|. T Consensus 81 ~E~~L~~~f~~~~W~i~~s~~h~~DPdT~Q~~~t~~~~k~ 120 (123) T protein:vir:10 81 IEIAMMKAFTHQHWQVAAVRQRTLDPDTQQLFNTFYFSRT 120 (123) T ss_pred HHHHHHHHHhcCCcEEEecCCCcCCCCCCeEEEEEEEEee Confidence 9999999999999999999999999999999999999999 No 6 >protein:vir:1088 Length: 131 # NCBI annotation: Orf47 # Family: family:all:1192 # MgeID: mge:21 # MgeName: bIL309 # Cross-refs: genbank:acc:NP_076742;genbank:gi:13095852;genbank:GeneID:920386 Probab=100.00 E-value=2.2e-51 Score=298.27 Aligned_cols=118 Identities=20% Similarity=0.209 Sum_probs=116.2 Q ss_pred CchHHHHHHHHhCCccchhhhcCCCCCceEcCCceeEEEEEecccCcccccCCeeeeEEEEEEEEEEEeccCCCCHHHHH Q lcl|NC_012884. 1 MSLVSDVKNILLSTGKIDKVFIDNLPPQKTIDENITFAILSRAGVSLREFGNDKVNIISHEADVLISAKSDIDFDLEELE 80 (118) Q Consensus 1 m~~V~d~~~~i~~~~wiD~vy~~~iP~e~~~~~d~T~vLite~~~~p~~ygN~~f~~~~~~veIQIFyk~~~~~d~~~~E 80 (118) |+.|.+|+.||.+..|+|.+|+++||+|.++++|+|+|||||+.++|++|||++|+++++|||||||||+++++|+++|| T Consensus 1 mlpv~~v~~li~~~~~~~~vy~~~IP~e~~~~~d~T~vLiTe~~~~p~~ygn~~f~~~~~~VEVQIFYk~~~~~di~~~E 80 (131) T protein:vir:10 1 MRPTQEVSQIVGAFRPSWLVFENFIPKEHVNDLDNTQVLLTEFKSDITNYGDGTFNSVVLAVTIQIFYGFNLSESMLLAE 80 (131) T ss_pred CchHHHHHHHHhhcCccceEeeccCCccccCCCceEEEEEecccCCcccccCceeeeeEEEEEEEEEEecCCCCCHHHHH Confidence 99999999999888888889999999999999999999999999999999999999999999999999999999999999 Q ss_pred HHHHHHHhcCCCeEEecCCCcCCCCcc----eEEEEEEEEeC Q lcl|NC_012884. 81 SELYSKIFDDNYLISSSTGFIVDDETK----HYELRLKVTKE 118 (118) Q Consensus 81 ~~L~k~f~~ngW~i~~s~~h~~DPdT~----Q~t~tfyv~K~ 118 (118) ++|||+|++|||+|++|++|++||||| |++|||||+|. T Consensus 81 i~L~~~f~~ngW~i~~s~~ht~DPdT~q~~~Q~tkt~y~~k~ 122 (131) T protein:vir:10 81 IELMEKLKDSGWLTISSEPHYLDVSTNTTKQQTKKNITVEKI 122 (131) T ss_pred HHHHHHHHhCCceEeeCCCCccCCCCCceeEEEEEEEEEEee Confidence 999999999999999999999999998 99999999999 No 7 >protein:vir:1029 Length: 131 # NCBI annotation: Orf49 # Family: family:all:1192 # MgeID: mge:20 # MgeName: bIL286 # Cross-refs: genbank:acc:NP_076683;genbank:gi:13095792;genbank:GeneID:920337 Probab=100.00 E-value=4.4e-50 Score=291.15 Aligned_cols=117 Identities=20% Similarity=0.307 Sum_probs=109.6 Q ss_pred CchHHHHHHHHh--CCccchhhhcCCCCCceEcCCceeEEEEEecccCcccccCCeeeeEEEEEEEEEEEecc--CCCCH Q lcl|NC_012884. 1 MSLVSDVKNILL--STGKIDKVFIDNLPPQKTIDENITFAILSRAGVSLREFGNDKVNIISHEADVLISAKSD--IDFDL 76 (118) Q Consensus 1 m~~V~d~~~~i~--~~~wiD~vy~~~iP~e~~~~~d~T~vLite~~~~p~~ygN~~f~~~~~~veIQIFyk~~--~~~d~ 76 (118) -+.|.+|+.||. +++| |+||+++||+|+++++|+|+|||||+.++|++|||++|+++++|||||||||++ .++|+ T Consensus 2 ~~pv~~v~~Li~~~~~~~-D~vy~~~Ip~e~~~~td~T~vLiTe~~~~~~~ygnn~f~~~~~~VEIQIFYk~~~d~~~d~ 80 (131) T protein:vir:10 2 KRPVEIVQDIIAASDFPH-DEIFLDSIPSEKLDSSNETQVLLTESDNGPSDYGNSDFISLMYGVYIQIFYSNAEDSGINI 80 (131) T ss_pred cchHHHHHHHHhccCCCh-hheeeccCCcccccCCceEEEEEecccCCcccccCcceeeeeEEEEEEEEeeccCCCCCCH Confidence 346778888884 5677 999999999999999999999999999999999999999999999999999965 56799 Q ss_pred HHHHHHHHHHHhcCCCeEEecCCCcCCCCcceEEEEEEEEeC Q lcl|NC_012884. 77 EELESELYSKIFDDNYLISSSTGFIVDDETKHYELRLKVTKE 118 (118) Q Consensus 77 ~~~E~~L~k~f~~ngW~i~~s~~h~~DPdT~Q~t~tfyv~K~ 118 (118) .++|++|||+|++|||+|+++++|++||||+|+++||||+|. T Consensus 81 ~~~Ei~L~~~f~~~gW~i~~s~~h~~DPdT~Q~t~t~y~~k~ 122 (131) T protein:vir:10 81 VQSEINLMKSFINNDWLIAQSKSHYIDPDTGQIIKNLTVQRI 122 (131) T ss_pred HHHHHHHHHHHhcCCceEEcCCCCcCCCCCCeEEEEEEEEEe Confidence 999999999999999999999999999999999999999999 No 8 >protein:vir:3995 Length: 131 # NCBI annotation: unknown # Family: family:all:1192 # MgeID: mge:319 # MgeName: BK5-T # Cross-refs: genbank:acc:NP_116503;genbank:gi:14251136;genbank:GeneID:921308 Probab=100.00 E-value=4.5e-50 Score=291.11 Aligned_cols=117 Identities=20% Similarity=0.309 Sum_probs=109.6 Q ss_pred CchHHHHHHHHh--CCccchhhhcCCCCCceEcCCceeEEEEEecccCcccccCCeeeeEEEEEEEEEEEecc--CCCCH Q lcl|NC_012884. 1 MSLVSDVKNILL--STGKIDKVFIDNLPPQKTIDENITFAILSRAGVSLREFGNDKVNIISHEADVLISAKSD--IDFDL 76 (118) Q Consensus 1 m~~V~d~~~~i~--~~~wiD~vy~~~iP~e~~~~~d~T~vLite~~~~p~~ygN~~f~~~~~~veIQIFyk~~--~~~d~ 76 (118) -+.|.+|+.||. +++| |+||+++||+|+++++|+|+|||||+.++|++|||++|+++.+|||||||||++ .++|+ T Consensus 2 ~~pv~~v~~Li~~~~~~~-D~vy~~~Ip~e~~~~td~T~vLiTe~~~~~~~ygnn~f~~~~~~VEIQIFYk~~~d~~~d~ 80 (131) T protein:vir:39 2 KRPVEIVQDIIAASDFPH-DEIFLDSIPSEKLDSSNETQVLLTESDNGPSDYGNSEFVSLLYGVYIQIFYSNAEDSGINI 80 (131) T ss_pred cchHHHHHHHHhccCCCh-hheeeccCCcccccCCceEEEEEecccCCcccccCcceeeeeEEEEEEEEeeccCCCCCCH Confidence 346778888884 5677 999999999999999999999999999999999999999999999999999965 56799 Q ss_pred HHHHHHHHHHHhcCCCeEEecCCCcCCCCcceEEEEEEEEeC Q lcl|NC_012884. 77 EELESELYSKIFDDNYLISSSTGFIVDDETKHYELRLKVTKE 118 (118) Q Consensus 77 ~~~E~~L~k~f~~ngW~i~~s~~h~~DPdT~Q~t~tfyv~K~ 118 (118) .++|++|||+|++|||+|+++++|++||||+|+++||||+|. T Consensus 81 ~~~Ei~L~~~f~~~gW~i~~s~~h~~DPdT~Q~t~t~y~~k~ 122 (131) T protein:vir:39 81 VQSEINLMKSFINNDWLIAQSKSHYIDPDTGQIIKNLTVQRI 122 (131) T ss_pred HHHHHHHHHHHhcCCceEEcCCCCcCCCCCCeEEEEEEEEEe Confidence 999999999999999999999999999999999999999999 No 9 >protein:vir:7413 Length: 131 # NCBI annotation: hypothetical protein # Family: family:all:1192 # MgeID: mge:146 # MgeName: P335 # Cross-refs: genbank:acc:NP_839930;genbank:gi:30089900;genbank:GeneID:1260687 Probab=100.00 E-value=4.3e-49 Score=285.74 Aligned_cols=117 Identities=22% Similarity=0.353 Sum_probs=110.2 Q ss_pred Cch-HHHHHHHHh--CCccchhhhcCCCCCceEcCCceeEEEEEecccCcccccCCeeeeEEEEEEEEEEEec--cCCCC Q lcl|NC_012884. 1 MSL-VSDVKNILL--STGKIDKVFIDNLPPQKTIDENITFAILSRAGVSLREFGNDKVNIISHEADVLISAKS--DIDFD 75 (118) Q Consensus 1 m~~-V~d~~~~i~--~~~wiD~vy~~~iP~e~~~~~d~T~vLite~~~~p~~ygN~~f~~~~~~veIQIFyk~--~~~~d 75 (118) |+. |.+|+.||. +++| |+||+++||+|.++++|+|+|||||+.++|++|||++|+++++|||||||||+ +.++| T Consensus 1 M~lpv~~v~~Li~a~~~~~-D~vy~~~Ip~e~~~~~d~T~vLITe~~n~~~~ygnn~f~~~~~~VEIQIFY~~~~d~~~~ 79 (131) T protein:vir:74 1 MKRPVEIVQDIIAASDFPH-DEIFLDSIPSEKLDSSNETQVLLTESDNGPNDYGNSDFISLMYGVYIQIFYTNAEDSDIN 79 (131) T ss_pred CcchHHHHHHHHhccCCCh-heeeeccCCcccccCCceeEEEEecccCCcccccCcceeeeeEEEEEEEEEecCCCCCcC Confidence 765 558888884 4566 99999999999999999999999999999999999999999999999999994 66689 Q ss_pred HHHHHHHHHHHHhcCCCeEEecCCCcCCCCcceEEEEEEEEeC Q lcl|NC_012884. 76 LEELESELYSKIFDDNYLISSSTGFIVDDETKHYELRLKVTKE 118 (118) Q Consensus 76 ~~~~E~~L~k~f~~ngW~i~~s~~h~~DPdT~Q~t~tfyv~K~ 118 (118) +.++||+||++|++|||+|++|++|++||||+|+++||||+|. T Consensus 80 ~~~~Ei~L~~~f~~ngW~i~~s~~h~~DPdT~Q~~~t~y~~k~ 122 (131) T protein:vir:74 80 IVQSEINLMKSFINNDWLIAQSKSHYIDPDTGQIIKNLTVQRI 122 (131) T ss_pred HHHHHHHHHHHHhcCCceEEecCCCcCCCCcceEEEEEEEEee Confidence 9999999999999999999999999999999999999999999 No 10 >protein:vir:3849 Length: 123 # NCBI annotation: hypothetical protein # Family: family:all:28610 # MgeID: mge:322 # MgeName: phi adh # Cross-refs: genbank:acc:NP_050155;swissprot:trembl:q9t1f2;genbank:gi:9633047;uniprot:Q9T1F2;genbank:GeneID:1262147 Probab=99.75 E-value=6.8e-22 Score=136.64 Aligned_cols=115 Identities=15% Similarity=0.245 Sum_probs=109.3 Q ss_pred CchHHHHHHHHhCC-ccchhhhcCCCCCceEcCCceeEEEEEecccCcccccCCeeeeEEEEEEEEEEEeccCCC-CHHH Q lcl|NC_012884. 1 MSLVSDVKNILLST-GKIDKVFIDNLPPQKTIDENITFAILSRAGVSLREFGNDKVNIISHEADVLISAKSDIDF-DLEE 78 (118) Q Consensus 1 m~~V~d~~~~i~~~-~wiD~vy~~~iP~e~~~~~d~T~vLite~~~~p~~ygN~~f~~~~~~veIQIFyk~~~~~-d~~~ 78 (118) |+|+.||+++|+|. +++|+.|..+| .+..+++ +|++|||.+....++||+++...-.|++|||+|.+.+..+ +++. T Consensus 1 mtaindayqailnkvpgvdryykkri-tgkidnt-ktdllitqvigryagygsntpsievqeieiqvfignenkvanldt 78 (123) T protein:vir:38 1 MTAINDAYQAILNKVPGVDRYYKKRI-TGKIDNT-KTDLLITQVIGRYAGYGSNTPSIEVQEIEIQVFIGNENKVANLDT 78 (123) T ss_pred CcccchhHHHHHhhCCCcchhhhhhh-ccccccc-chhhhhhhhhhhhcccCCCCCceeeeEEEEEEEEcCCccccchhh Confidence 99999999999886 99999999999 5666666 9999999999999999999999999999999999999887 9999 Q ss_pred HHHHHHHHHhcCCCeEEecCCCcCCCCcceEEEEEEEEeC Q lcl|NC_012884. 79 LESELYSKIFDDNYLISSSTGFIVDDETKHYELRLKVTKE 118 (118) Q Consensus 79 ~E~~L~k~f~~ngW~i~~s~~h~~DPdT~Q~t~tfyv~K~ 118 (118) +..++.+||+ ..|+++.......||+|.+...||.|+|. T Consensus 79 iknsivsflv-pkwqvsygpdegtdpetdetmltfhftrn 117 (123) T protein:vir:38 79 IKNSIVSFLV-PKWQVSYGPDEGTDPETDETMLTFHFTRN 117 (123) T ss_pred hhhhhhhhhc-cceeeeeCCCCCCCCcccceeEEEeeecc Confidence 9999999999 89999999999999999999999999998 No 11 >protein:vir:78648 Length: 131 # NCBI annotation: hypothetical protein # Family: family:all:508 # MgeID: mge:1855 # MgeName: tp310-2 # Cross-refs: genbank:acc:YP_001429947;genbank:gi:156604001;genbank:GeneID:5525394 Probab=98.40 E-value=1.9e-09 Score=68.43 Aligned_cols=114 Identities=15% Similarity=0.225 Sum_probs=90.1 Q ss_pred CchHHHHHHHHhCCccc-----hhhhcCCCCCceEcCCceeEEEEEecccCcccccCCeeeeEEEEEEEEEEEeccCCCC Q lcl|NC_012884. 1 MSLVSDVKNILLSTGKI-----DKVFIDNLPPQKTIDENITFAILSRAGVSLREFGNDKVNIISHEADVLISAKSDIDFD 75 (118) Q Consensus 1 m~~V~d~~~~i~~~~wi-----D~vy~~~iP~e~~~~~d~T~vLite~~~~p~~ygN~~f~~~~~~veIQIFyk~~~~~d 75 (118) |--+.+++++|.+=.-| .+|+...+|+.. +.++|.++|++..+.|+.||+|+.-...+.++|.||++..... T Consensus 1 ~dil~~iy~~L~~d~~L~~lv~~rI~~y~~Pe~~--d~~~p~I~i~~i~~~p~~yadn~~l~~~~~~QIDVws~~~~~~- 77 (131) T protein:vir:78 1 MNILNTIKGILLSDAELKTHINSRIYYYKVTENA--ETSKPFVVITPVYDLPSDFMSDKYLSEEYLIQIDVESSNNQKT- 77 (131) T ss_pred CchHHHHHHHhhcchHHHhhcCCceEEeecCCcc--ccccceEEEeeCCCCCccccCCceeeeEEEEEEEEEecCccch- Confidence 88888889988543222 378999999965 4578999999999999999999999999999999999987654 Q ss_pred HHHHHHHHHHHHhcCCCeEEecCCCcCCCCcceEEEEEEEEeC Q lcl|NC_012884. 76 LEELESELYSKIFDDNYLISSSTGFIVDDETKHYELRLKVTKE 118 (118) Q Consensus 76 ~~~~E~~L~k~f~~ngW~i~~s~~h~~DPdT~Q~t~tfyv~K~ 118 (118) .++..++-++|..+||.=.++..+-+||||+..-.+..+.-- T Consensus 78 -~~i~~~I~~~M~~~gf~q~s~~~d~Yd~dtk~y~~arRYrg~ 119 (131) T protein:vir:78 78 -IDITKRIRYLLYQQNLIQASSQLDAYFEETKRYVMSRRYQGI 119 (131) T ss_pred -HHHHHHHHHHHHHcCceeccCCCCccchhhHHhhhhhhcccc Confidence 478888889999999995444446679999776555444221 No 12 >protein:vir:96972 Length: 131 # NCBI annotation: ORF035 # Family: family:all:508 # MgeID: mge:1643 # MgeName: 42e # Cross-refs: genbank:acc:YP_239865;genbank:gi:66395543;genbank:GeneID:5133005 Probab=98.40 E-value=1.9e-09 Score=68.43 Aligned_cols=114 Identities=15% Similarity=0.225 Sum_probs=90.1 Q ss_pred CchHHHHHHHHhCCccc-----hhhhcCCCCCceEcCCceeEEEEEecccCcccccCCeeeeEEEEEEEEEEEeccCCCC Q lcl|NC_012884. 1 MSLVSDVKNILLSTGKI-----DKVFIDNLPPQKTIDENITFAILSRAGVSLREFGNDKVNIISHEADVLISAKSDIDFD 75 (118) Q Consensus 1 m~~V~d~~~~i~~~~wi-----D~vy~~~iP~e~~~~~d~T~vLite~~~~p~~ygN~~f~~~~~~veIQIFyk~~~~~d 75 (118) |--+.+++++|.+=.-| .+|+...+|+.. +.++|.++|++..+.|+.||+|+.-...+.++|.||++..... T Consensus 1 ~dil~~iy~~L~~d~~L~~lv~~rI~~y~~Pe~~--d~~~p~I~i~~i~~~p~~yadn~~l~~~~~~QIDVws~~~~~~- 77 (131) T protein:vir:96 1 MNILNTIKGILLSDAELKTHINSRIYYYKVTENA--ETSKPFVVITPVYDLPSDFMSDKYLSEEYLIQIDVESSNNQKT- 77 (131) T ss_pred CchHHHHHHHhhcchHHHhhcCCceEEeecCCcc--ccccceEEEeeCCCCCccccCCceeeeEEEEEEEEEecCccch- Confidence 88888889988543222 378999999965 4578999999999999999999999999999999999987654 Q ss_pred HHHHHHHHHHHHhcCCCeEEecCCCcCCCCcceEEEEEEEEeC Q lcl|NC_012884. 76 LEELESELYSKIFDDNYLISSSTGFIVDDETKHYELRLKVTKE 118 (118) Q Consensus 76 ~~~~E~~L~k~f~~ngW~i~~s~~h~~DPdT~Q~t~tfyv~K~ 118 (118) .++..++-++|..+||.=.++..+-+||||+..-.+..+.-- T Consensus 78 -~~i~~~I~~~M~~~gf~q~s~~~d~Yd~dtk~y~~arRYrg~ 119 (131) T protein:vir:96 78 -IDITKRIRYLLYQQNLIQASSQLDAYFEETKRYVMSRRYQGI 119 (131) T ss_pred -HHHHHHHHHHHHHcCceeccCCCCccchhhHHhhhhhhcccc Confidence 478888889999999995444446679999776555444221 No 13 >protein:vir:9364 Length: 131 # NCBI annotation: SLT orf 131b-like protein # Family: family:all:508 # MgeID: mge:166 # MgeName: phi 12 # Cross-refs: genbank:acc:NP_803342;genbank:gi:29028653;genbank:GeneID:1258094 Probab=98.40 E-value=1.9e-09 Score=68.43 Aligned_cols=114 Identities=15% Similarity=0.225 Sum_probs=90.1 Q ss_pred CchHHHHHHHHhCCccc-----hhhhcCCCCCceEcCCceeEEEEEecccCcccccCCeeeeEEEEEEEEEEEeccCCCC Q lcl|NC_012884. 1 MSLVSDVKNILLSTGKI-----DKVFIDNLPPQKTIDENITFAILSRAGVSLREFGNDKVNIISHEADVLISAKSDIDFD 75 (118) Q Consensus 1 m~~V~d~~~~i~~~~wi-----D~vy~~~iP~e~~~~~d~T~vLite~~~~p~~ygN~~f~~~~~~veIQIFyk~~~~~d 75 (118) |--+.+++++|.+=.-| .+|+...+|+.. +.++|.++|++..+.|+.||+|+.-...+.++|.||++..... T Consensus 1 ~dil~~iy~~L~~d~~L~~lv~~rI~~y~~Pe~~--d~~~p~I~i~~i~~~p~~yadn~~l~~~~~~QIDVws~~~~~~- 77 (131) T protein:vir:93 1 MNILNTIKGILLSDAELKTHINSRIYYYKVTENA--ETSKPFVVITPVYDLPSDFMSDKYLSEEYLIQIDVESSNNQKT- 77 (131) T ss_pred CchHHHHHHHhhcchHHHhhcCCceEEeecCCcc--ccccceEEEeeCCCCCccccCCceeeeEEEEEEEEEecCccch- Confidence 88888889988543222 378999999965 4578999999999999999999999999999999999987654 Q ss_pred HHHHHHHHHHHHhcCCCeEEecCCCcCCCCcceEEEEEEEEeC Q lcl|NC_012884. 76 LEELESELYSKIFDDNYLISSSTGFIVDDETKHYELRLKVTKE 118 (118) Q Consensus 76 ~~~~E~~L~k~f~~ngW~i~~s~~h~~DPdT~Q~t~tfyv~K~ 118 (118) .++..++-++|..+||.=.++..+-+||||+..-.+..+.-- T Consensus 78 -~~i~~~I~~~M~~~gf~q~s~~~d~Yd~dtk~y~~arRYrg~ 119 (131) T protein:vir:93 78 -IDITKRIRYLLYQQNLIQASSQLDAYFEETKRYVMSRRYQGI 119 (131) T ss_pred -HHHHHHHHHHHHHcCceeccCCCCccchhhHHhhhhhhcccc Confidence 478888889999999995444446679999776555444221 No 14 >protein:vir:2689 Length: 131 # NCBI annotation: hypothetical protein # Family: family:all:508 # MgeID: mge:57 # MgeName: phiSLT # Cross-refs: genbank:acc:NP_075508;genbank:gi:12719437;genbank:GeneID:920159 Probab=98.40 E-value=1.9e-09 Score=68.43 Aligned_cols=114 Identities=15% Similarity=0.225 Sum_probs=90.1 Q ss_pred CchHHHHHHHHhCCccc-----hhhhcCCCCCceEcCCceeEEEEEecccCcccccCCeeeeEEEEEEEEEEEeccCCCC Q lcl|NC_012884. 1 MSLVSDVKNILLSTGKI-----DKVFIDNLPPQKTIDENITFAILSRAGVSLREFGNDKVNIISHEADVLISAKSDIDFD 75 (118) Q Consensus 1 m~~V~d~~~~i~~~~wi-----D~vy~~~iP~e~~~~~d~T~vLite~~~~p~~ygN~~f~~~~~~veIQIFyk~~~~~d 75 (118) |--+.+++++|.+=.-| .+|+...+|+.. +.++|.++|++..+.|+.||+|+.-...+.++|.||++..... T Consensus 1 ~dil~~iy~~L~~d~~L~~lv~~rI~~y~~Pe~~--d~~~p~I~i~~i~~~p~~yadn~~l~~~~~~QIDVws~~~~~~- 77 (131) T protein:vir:26 1 MNILNTIKGILLSDAELKTHINSRIYYYKVTENA--ETSKPFVVITPVYDLPSDFMSDKYLSEEYLIQIDVESSNNQKT- 77 (131) T ss_pred CchHHHHHHHhhcchHHHhhcCCceEEeecCCcc--ccccceEEEeeCCCCCccccCCceeeeEEEEEEEEEecCccch- Confidence 88888889988543222 378999999965 4578999999999999999999999999999999999987654 Q ss_pred HHHHHHHHHHHHhcCCCeEEecCCCcCCCCcceEEEEEEEEeC Q lcl|NC_012884. 76 LEELESELYSKIFDDNYLISSSTGFIVDDETKHYELRLKVTKE 118 (118) Q Consensus 76 ~~~~E~~L~k~f~~ngW~i~~s~~h~~DPdT~Q~t~tfyv~K~ 118 (118) .++..++-++|..+||.=.++..+-+||||+..-.+..+.-- T Consensus 78 -~~i~~~I~~~M~~~gf~q~s~~~d~Yd~dtk~y~~arRYrg~ 119 (131) T protein:vir:26 78 -IDITKRIRYLLYQQNLIQASSQLDAYFEETKRYVMSRRYQGI 119 (131) T ss_pred -HHHHHHHHHHHHHcCceeccCCCCccchhhHHhhhhhhcccc Confidence 478888889999999995444446679999776555444221 No 15 >protein:vir:94418 Length: 131 # NCBI annotation: ORF029 # Family: family:all:508 # MgeID: mge:1506 # MgeName: 47 # Cross-refs: genbank:acc:YP_240011;genbank:gi:66395684;genbank:GeneID:5133078 Probab=98.38 E-value=2.2e-09 Score=68.02 Aligned_cols=114 Identities=15% Similarity=0.232 Sum_probs=89.8 Q ss_pred CchHHHHHHHHhCCccc-----hhhhcCCCCCceEcCCceeEEEEEecccCcccccCCeeeeEEEEEEEEEEEeccCCCC Q lcl|NC_012884. 1 MSLVSDVKNILLSTGKI-----DKVFIDNLPPQKTIDENITFAILSRAGVSLREFGNDKVNIISHEADVLISAKSDIDFD 75 (118) Q Consensus 1 m~~V~d~~~~i~~~~wi-----D~vy~~~iP~e~~~~~d~T~vLite~~~~p~~ygN~~f~~~~~~veIQIFyk~~~~~d 75 (118) |--+.+++++|.+=.-| .+|+...+|+.. +.+++.++|++..+.|+.||+|+.-...+.++|.||++.....+ T Consensus 1 ~dil~~iy~~L~~d~~L~~lv~~rI~~y~~Pe~~--d~~~p~I~i~~i~~~p~~yadn~~l~~~~~~QIDV~s~~~~~~~ 78 (131) T protein:vir:94 1 MNILNTIKGILLSDAELKTHINSRIYYYKVTENA--ETSKPFVVITPIYDLPSDFMSDKYLSEEYLIQIDVESSNNQKTI 78 (131) T ss_pred CchHHHHHHHhhcchHHHhhcCCceEEEecCCcc--ccccceEEEeeCCCCcccccCCceeeeEEEEEEEEEecCccchH Confidence 88888889988543322 268999999955 45789999999999999999999999999999999999876655 Q ss_pred HHHHHHHHHHHHhcCCCeEEecCCCcCCCCcceEEEEEEEEe---------C Q lcl|NC_012884. 76 LEELESELYSKIFDDNYLISSSTGFIVDDETKHYELRLKVTK---------E 118 (118) Q Consensus 76 ~~~~E~~L~k~f~~ngW~i~~s~~h~~DPdT~Q~t~tfyv~K---------~ 118 (118) .+..++-++|..+||.=.++-.+-+||||+..-.+-.+.- . T Consensus 79 --~i~~~I~~~M~~~gf~q~s~~~d~Yd~dtk~y~~arRYrg~~~~~y~~~~ 128 (131) T protein:vir:94 79 --DITKRIRYLLYQQNLIQASSQLDAYFEETKRYVMSRRYQGIPKNIYYKNQ 128 (131) T ss_pred --HHHHHHHHHHHHcCceeccCCCCccchhHHHhhhhhhhccchhhhhcccc Confidence 7788888899999999545444667999977655444311 1 No 16 >protein:vir:93902 Length: 131 # NCBI annotation: ORF029 # Family: family:all:508 # MgeID: mge:1485 # MgeName: 3A # Cross-refs: genbank:acc:YP_239943;genbank:gi:66395617;genbank:GeneID:5130968 Probab=98.35 E-value=3.1e-09 Score=67.24 Aligned_cols=114 Identities=15% Similarity=0.234 Sum_probs=89.6 Q ss_pred CchHHHHHHHHhCCccc-----hhhhcCCCCCceEcCCceeEEEEEecccCcccccCCeeeeEEEEEEEEEEEeccCCCC Q lcl|NC_012884. 1 MSLVSDVKNILLSTGKI-----DKVFIDNLPPQKTIDENITFAILSRAGVSLREFGNDKVNIISHEADVLISAKSDIDFD 75 (118) Q Consensus 1 m~~V~d~~~~i~~~~wi-----D~vy~~~iP~e~~~~~d~T~vLite~~~~p~~ygN~~f~~~~~~veIQIFyk~~~~~d 75 (118) |--+.+++++|.+=.-| .+|+...+|+.. +.+++.++|++..+.|+.||+|+.-...+.++|.||++.....+ T Consensus 1 ~dil~~iy~~L~~d~~L~~lv~~rI~~y~~Pe~~--d~~~p~I~i~~i~~~p~~yadn~~l~~~~~~QIDV~s~~~~~~~ 78 (131) T protein:vir:93 1 MNILNTIKEILLSDAELQTYINSRIYYYKVTENA--ETSKPFVVITPIYDLPSDFMSDKYLSEEYLIQIDVESSNNQKTI 78 (131) T ss_pred CchHHHHHHHhhcchHHHhhcCCceEEEecCCcc--ccccceEEEeeCCCCcccccCCceeeeEEEEEEEEEecCccchH Confidence 88888889988543222 267889999955 45789999999999999999999999999999999998876655 Q ss_pred HHHHHHHHHHHHhcCCCeEEecCCCcCCCCcceEEEEEEEEe---------C Q lcl|NC_012884. 76 LEELESELYSKIFDDNYLISSSTGFIVDDETKHYELRLKVTK---------E 118 (118) Q Consensus 76 ~~~~E~~L~k~f~~ngW~i~~s~~h~~DPdT~Q~t~tfyv~K---------~ 118 (118) .+..++-++|..+||.=.++-.+-+||||+..-.+-.+.- . T Consensus 79 --~i~~~I~~~M~~~gf~q~s~~~d~Yd~dtk~y~~arRYrg~~~~~y~~~~ 128 (131) T protein:vir:93 79 --DITKRIRYLLYQQNLIQASSQLDAYFEETKRYVMSRRYQGIPKNIYYKNQ 128 (131) T ss_pred --HHHHHHHHHHHHcCceeccCCCCccchhHHHhhhhhhhccchhhhhcccc Confidence 7888888899999999555544667999977655443311 1 No 17 >protein:vir:1274 Length: 162 # NCBI annotation: hypothetical protein # Family: family:all:517 # MgeID: mge:329 # MgeName: phi-105 # Cross-refs: genbank:acc:NP_690766;genbank:gi:22855006;genbank:GeneID:955217 Probab=98.06 E-value=7.5e-08 Score=59.63 Aligned_cols=117 Identities=12% Similarity=0.067 Sum_probs=92.5 Q ss_pred CchHHHHHHHHhCCccchhhhcCCCCCce-EcCCceeEEEEEecccCcccccCCeeeeEEEEEEEEEEEeccCCCCHHHH Q lcl|NC_012884. 1 MSLVSDVKNILLSTGKIDKVFIDNLPPQK-TIDENITFAILSRAGVSLREFGNDKVNIISHEADVLISAKSDIDFDLEEL 79 (118) Q Consensus 1 m~~V~d~~~~i~~~~wiD~vy~~~iP~e~-~~~~d~T~vLite~~~~p~~ygN~~f~~~~~~veIQIFyk~~~~~d~~~~ 79 (118) |.-+.+++++|.|-..|.++-.+.|=.-+ .+.+++|.|.+.|..+.|..|+.|....-...++|-||=+....-|..++ T Consensus 39 mn~~k~v~q~L~n~~~L~~l~~~~i~~l~~~~~~~~p~Itf~e~~~~p~~yADD~e~ss~~~iQIDIwsk~st~~d~~~l 118 (162) T protein:vir:12 39 YSPKIELVSTLNSSAFLKGLTSGGIHNLVANDVSAFPRVVFSEIQDADADFADNEVYSFEVRYQISIFTQASTRGKETAI 118 (162) T ss_pred hhHHHHHHHHhcChhHHHhhCCCceEEEeecCCCCceEEEEEeecCCCCcccccceeeEEEEEEEEEeecCCcchhHHHH Confidence 99999999999766544433332221111 23477999999999999999999999999999999999887766688899 Q ss_pred HHHHHHHHhcCCCeEEecCCCcCCCCcceEEEEEEEEeC Q lcl|NC_012884. 80 ESELYSKIFDDNYLISSSTGFIVDDETKHYELRLKVTKE 118 (118) Q Consensus 80 E~~L~k~f~~ngW~i~~s~~h~~DPdT~Q~t~tfyv~K~ 118 (118) +.++.++|..+|+.=.++. ..++|||+=.-|.+.|.+- T Consensus 119 ~~~I~~lMk~~GF~R~s~~-d~YE~DTklyHK~~RF~~~ 156 (162) T protein:vir:12 119 ASEIDRLMREIGYSRYDSQ-DLYETDTKVFHKARRYKKT 156 (162) T ss_pred HHHHHHHHHHcCCEeecCC-CCCCChhhhhhhhheeccc Confidence 9999999999999965555 6889999877666666555 No 18 >protein:vir:9709 Length: 141 # NCBI annotation: hypothetical protein # Family: family:all:2110 # MgeID: mge:174 # MgeName: 315.2 # Cross-refs: genbank:acc:NP_795471;genbank:gi:28876220;genbank:GeneID:1257764 Probab=98.03 E-value=2.7e-08 Score=62.05 Aligned_cols=112 Identities=10% Similarity=0.133 Sum_probs=87.5 Q ss_pred CchHHHHHHHHhCC----ccch-------------hhhcCCCCCc---eEcCCceeEEEEEecccCcccccCCeeeeEEE Q lcl|NC_012884. 1 MSLVSDVKNILLST----GKID-------------KVFIDNLPPQ---KTIDENITFAILSRAGVSLREFGNDKVNIISH 60 (118) Q Consensus 1 m~~V~d~~~~i~~~----~wiD-------------~vy~~~iP~e---~~~~~d~T~vLite~~~~p~~ygN~~f~~~~~ 60 (118) |.+|..++++|-+- +-++ .+|...+|++ .+.-..-=.+.|+++.+.++.||+|....... T Consensus 1 mlp~~~vy~~L~~n~~L~~lm~~~r~~~~~~~~~~~If~~~vPE~~~~~qk~~~aP~IrI~~i~~~~~~yADn~~~~~~~ 80 (141) T protein:vir:97 1 MIAETTAYKLLSNDKTLNELLDKLRGGPFKNGFKQGIFTYDIPDNPIDLRKAELAPFMRIKTTLDGPADYADDEILCNEQ 80 (141) T ss_pred CchHHHHHHHhcccHHHHHHHhhhccccccccccccccccccCCChhhhhhhccCCeEEEeccCCCcccccccccceeee Confidence 99999999998332 2333 3778889886 33334457899999999999999999999999 Q ss_pred EEEEEEEEeccCCCCHHHHHHHHHHHHhcCCCeEEe--cCCCcCCCCcceEEEEEEEEeC Q lcl|NC_012884. 61 EADVLISAKSDIDFDLEELESELYSKIFDDNYLISS--STGFIVDDETKHYELRLKVTKE 118 (118) Q Consensus 61 ~veIQIFyk~~~~~d~~~~E~~L~k~f~~ngW~i~~--s~~h~~DPdT~Q~t~tfyv~K~ 118 (118) +|+|-+|=+.-. ..+.+.-.+-+.|.++||+-=. +.+...||||. .++..|+ T Consensus 81 ~vQIdiW~~~~~--~~e~i~~~Id~~M~~~gf~rY~~~~~~~~~dpD~d----~~~~~rR 134 (141) T protein:vir:97 81 RITINFWCKTAS--EADQINKCIDNILKQGGFERYTANEKPRYKDSDID----LLMNVRK 134 (141) T ss_pred eeEeeeeecChh--HHHHHHHHHHHHHHhcCceeccccCCCCCCccchh----hhhhhhh Confidence 999999988432 5567788899999999999433 46788999983 5666666 No 19 >protein:vir:80001 Length: 126 # NCBI annotation: hypothetical protein # Family: family:all:517 # MgeID: mge:1875 # MgeName: tp310-3 # Cross-refs: genbank:acc:YP_001430007;genbank:gi:156604062;genbank:GeneID:5525461 Probab=97.59 E-value=1e-06 Score=53.40 Aligned_cols=111 Identities=7% Similarity=0.050 Sum_probs=85.1 Q ss_pred HHHHHHHHhCCccc----hhhhcCCCCCceEc--CCceeEEEEEecccCcccccCCeeeeEEEEEEEEEEEeccCCCCHH Q lcl|NC_012884. 4 VSDVKNILLSTGKI----DKVFIDNLPPQKTI--DENITFAILSRAGVSLREFGNDKVNIISHEADVLISAKSDIDFDLE 77 (118) Q Consensus 4 V~d~~~~i~~~~wi----D~vy~~~iP~e~~~--~~d~T~vLite~~~~p~~ygN~~f~~~~~~veIQIFyk~~~~~d~~ 77 (118) ..++..+|.|-.=. |.+=..++|-+... ...+|-+.+.+..+.|+.||.|........++|-|||+++ +.. T Consensus 1 ~~~~~~~i~n~~I~~li~~~Lk~~nvPV~~~~y~~~~ktyItf~ey~~~~~~yADd~e~~t~~~iQIDIW~sk~---~~~ 77 (126) T protein:vir:80 1 MINVTELIRNAIIANNITDEVNVFNYTIDDHFHEKTDKPIIRIYPLPFNPDTYADDNEISREYHYQIDVWWSQD---EPN 77 (126) T ss_pred CcchHHhhhhhHHHhhhhhceeeccceeccccccCCCCcEEEEEeecCCCCccccCeeeeeEEEEEEEEeeCCC---CHH Confidence 44555565332212 33334456665533 4556999999999999999999999999999999999996 577 Q ss_pred HHHHHHHHHHhcCCCeEEecCCCcCCCCcceEEEEEEEEeC Q lcl|NC_012884. 78 ELESELYSKIFDDNYLISSSTGFIVDDETKHYELRLKVTKE 118 (118) Q Consensus 78 ~~E~~L~k~f~~ngW~i~~s~~h~~DPdT~Q~t~tfyv~K~ 118 (118) +++.++.++|..+|.. ..+....++|||+=.-+.+.|.=. T Consensus 78 ~l~~~V~~~Mk~~GF~-R~~~~d~YE~DtklyHk~~Rf~~~ 117 (126) T protein:vir:80 78 EQAEKIVELLKVINFQ-CYYREPLYESDVMSFRHIIRAKGS 117 (126) T ss_pred HHHHHHHHHHHHcCCe-eeecCCCccchhhhhheeeeeeee Confidence 8999999999999997 455568899999888888777443 No 20 >protein:vir:81093 Length: 126 # NCBI annotation: hypothetical protein # Family: family:all:517 # MgeID: mge:1891 # MgeName: tp310-1 # Cross-refs: genbank:acc:YP_001429879;genbank:gi:156603932;genbank:GeneID:5525313 Probab=97.59 E-value=1e-06 Score=53.40 Aligned_cols=111 Identities=7% Similarity=0.050 Sum_probs=85.1 Q ss_pred HHHHHHHHhCCccc----hhhhcCCCCCceEc--CCceeEEEEEecccCcccccCCeeeeEEEEEEEEEEEeccCCCCHH Q lcl|NC_012884. 4 VSDVKNILLSTGKI----DKVFIDNLPPQKTI--DENITFAILSRAGVSLREFGNDKVNIISHEADVLISAKSDIDFDLE 77 (118) Q Consensus 4 V~d~~~~i~~~~wi----D~vy~~~iP~e~~~--~~d~T~vLite~~~~p~~ygN~~f~~~~~~veIQIFyk~~~~~d~~ 77 (118) ..++..+|.|-.=. |.+=..++|-+... ...+|-+.+.+..+.|+.||.|........++|-|||+++ +.. T Consensus 1 ~~~~~~~i~n~~I~~li~~~Lk~~nvPV~~~~y~~~~ktyItf~ey~~~~~~yADd~e~~t~~~iQIDIW~sk~---~~~ 77 (126) T protein:vir:81 1 MINVTELIRNAIIANNITDEVNVFNYTIDDHFHEKTDKPIIRIYPLPFNPDTYADDNEISREYHYQIDVWWSQD---EPN 77 (126) T ss_pred CcchHHhhhhhHHHhhhhhceeeccceeccccccCCCCcEEEEEeecCCCCccccCeeeeeEEEEEEEEeeCCC---CHH Confidence 44555565332212 33334456665533 4556999999999999999999999999999999999996 577 Q ss_pred HHHHHHHHHHhcCCCeEEecCCCcCCCCcceEEEEEEEEeC Q lcl|NC_012884. 78 ELESELYSKIFDDNYLISSSTGFIVDDETKHYELRLKVTKE 118 (118) Q Consensus 78 ~~E~~L~k~f~~ngW~i~~s~~h~~DPdT~Q~t~tfyv~K~ 118 (118) +++.++.++|..+|.. ..+....++|||+=.-+.+.|.=. T Consensus 78 ~l~~~V~~~Mk~~GF~-R~~~~d~YE~DtklyHk~~Rf~~~ 117 (126) T protein:vir:81 78 EQAEKIVELLKVINFQ-CYYREPLYESDVMSFRHIIRAKGS 117 (126) T ss_pred HHHHHHHHHHHHcCCe-eeecCCCccchhhhhheeeeeeee Confidence 8999999999999997 455568899999888888777443 No 21 >protein:vir:102888 Length: 119 # NCBI annotation: conserved phage protein # Family: family:all:517 # MgeID: mge:1492 # MgeName: Cherry # Cross-refs: genbank:acc:YP_338141;genbank:gi:77020213;genbank:GeneID:3703797 Probab=97.40 E-value=7.4e-06 Score=48.72 Aligned_cols=109 Identities=7% Similarity=0.070 Sum_probs=88.4 Q ss_pred CchHHHHHHHHhCCc------cchhhhcCCCCCceEcCCceeEEEEEecccCcccccCCeeeeEEEEEEEEEEEeccCCC Q lcl|NC_012884. 1 MSLVSDVKNILLSTG------KIDKVFIDNLPPQKTIDENITFAILSRAGVSLREFGNDKVNIISHEADVLISAKSDIDF 74 (118) Q Consensus 1 m~~V~d~~~~i~~~~------wiD~vy~~~iP~e~~~~~d~T~vLite~~~~p~~ygN~~f~~~~~~veIQIFyk~~~~~ 74 (118) |.-...++++|.+-+ .-++||-...|.. .++|.+.+.+..+.|+.||.|....-.+.++|-|| +++ T Consensus 2 ~~i~~~I~~~L~~~~~l~~l~~~~~I~~~~~~~~----~~~p~I~~~~~~~~p~~~add~e~~~~~~~QIDVw-sk~--- 73 (119) T protein:vir:10 2 INLRPDILQALENDQELVSLLGGKRIYYRKAKKA----EEFPRITYFELDNRPDGFADNQEIESEILFQVDVW-AKS--- 73 (119) T ss_pred CchHHHHHHHhhcCchhhhhcCCceEEecccCCC----CCCcEEEEEecCCCCCcccCCceeeeEEEEEEEEe-eCC--- Confidence 666667777775533 3345777777653 45799999999999999999999999999999997 443 Q ss_pred CHHHHHHHHHHHHhcCCCeEEecCCCcCCCCcceEEEEEEEEeC Q lcl|NC_012884. 75 DLEELESELYSKIFDDNYLISSSTGFIVDDETKHYELRLKVTKE 118 (118) Q Consensus 75 d~~~~E~~L~k~f~~ngW~i~~s~~h~~DPdT~Q~t~tfyv~K~ 118 (118) +..++..++-++|..+|+.-.++ ...++|||+=.-+...|..- T Consensus 74 ~~~~i~~~I~~~m~~~gf~r~~~-~d~ye~dt~lyhk~~Rf~~~ 116 (119) T protein:vir:10 74 STTAIHQKVNEIMKRIGFSRYAV-ADLYEEDTQIFHYAMRFAKG 116 (119) T ss_pred CHHHHHHHHHHHHHHcCCeeecc-CCCcCChhhhheeeeeeeee Confidence 57789999999999999997655 46899999988888888877 No 22 >protein:vir:102086 Length: 119 # NCBI annotation: structural protein # Family: family:all:517 # MgeID: mge:1503 # MgeName: Fah # Cross-refs: genbank:acc:YP_512319;genbank:gi:89152488;genbank:GeneID:3953079 Probab=97.40 E-value=7.4e-06 Score=48.72 Aligned_cols=109 Identities=7% Similarity=0.070 Sum_probs=88.4 Q ss_pred CchHHHHHHHHhCCc------cchhhhcCCCCCceEcCCceeEEEEEecccCcccccCCeeeeEEEEEEEEEEEeccCCC Q lcl|NC_012884. 1 MSLVSDVKNILLSTG------KIDKVFIDNLPPQKTIDENITFAILSRAGVSLREFGNDKVNIISHEADVLISAKSDIDF 74 (118) Q Consensus 1 m~~V~d~~~~i~~~~------wiD~vy~~~iP~e~~~~~d~T~vLite~~~~p~~ygN~~f~~~~~~veIQIFyk~~~~~ 74 (118) |.-...++++|.+-+ .-++||-...|.. .++|.+.+.+..+.|+.||.|....-.+.++|-|| +++ T Consensus 2 ~~i~~~I~~~L~~~~~l~~l~~~~~I~~~~~~~~----~~~p~I~~~~~~~~p~~~add~e~~~~~~~QIDVw-sk~--- 73 (119) T protein:vir:10 2 INLRPDILQALENDQELVSLLGGKRIYYRKAKKA----EEFPRITYFELDNRPDGFADNQEIESEILFQVDVW-AKS--- 73 (119) T ss_pred CchHHHHHHHhhcCchhhhhcCCceEEecccCCC----CCCcEEEEEecCCCCCcccCCceeeeEEEEEEEEe-eCC--- Confidence 666667777775533 3345777777653 45799999999999999999999999999999997 443 Q ss_pred CHHHHHHHHHHHHhcCCCeEEecCCCcCCCCcceEEEEEEEEeC Q lcl|NC_012884. 75 DLEELESELYSKIFDDNYLISSSTGFIVDDETKHYELRLKVTKE 118 (118) Q Consensus 75 d~~~~E~~L~k~f~~ngW~i~~s~~h~~DPdT~Q~t~tfyv~K~ 118 (118) +..++..++-++|..+|+.-.++ ...++|||+=.-+...|..- T Consensus 74 ~~~~i~~~I~~~m~~~gf~r~~~-~d~ye~dt~lyhk~~Rf~~~ 116 (119) T protein:vir:10 74 STTAIHQKVNEIMKRIGFSRYAV-ADLYEEDTQIFHYAMRFAKG 116 (119) T ss_pred CHHHHHHHHHHHHHHcCCeeecc-CCCcCChhhhheeeeeeeee Confidence 57789999999999999997655 46899999988888888877 No 23 >protein:vir:107581 Length: 119 # NCBI annotation: conserved phage protein # Family: family:all:517 # MgeID: mge:1491 # MgeName: Gamma # Cross-refs: genbank:acc:YP_338192;genbank:gi:77020160;genbank:GeneID:3703712 Probab=97.40 E-value=7.4e-06 Score=48.72 Aligned_cols=109 Identities=7% Similarity=0.070 Sum_probs=88.4 Q ss_pred CchHHHHHHHHhCCc------cchhhhcCCCCCceEcCCceeEEEEEecccCcccccCCeeeeEEEEEEEEEEEeccCCC Q lcl|NC_012884. 1 MSLVSDVKNILLSTG------KIDKVFIDNLPPQKTIDENITFAILSRAGVSLREFGNDKVNIISHEADVLISAKSDIDF 74 (118) Q Consensus 1 m~~V~d~~~~i~~~~------wiD~vy~~~iP~e~~~~~d~T~vLite~~~~p~~ygN~~f~~~~~~veIQIFyk~~~~~ 74 (118) |.-...++++|.+-+ .-++||-...|.. .++|.+.+.+..+.|+.||.|....-.+.++|-|| +++ T Consensus 2 ~~i~~~I~~~L~~~~~l~~l~~~~~I~~~~~~~~----~~~p~I~~~~~~~~p~~~add~e~~~~~~~QIDVw-sk~--- 73 (119) T protein:vir:10 2 INLRPDILQALENDQELVSLLGGKRIYYRKAKKA----EEFPRITYFELDNRPDGFADNQEIESEILFQVDVW-AKS--- 73 (119) T ss_pred CchHHHHHHHhhcCchhhhhcCCceEEecccCCC----CCCcEEEEEecCCCCCcccCCceeeeEEEEEEEEe-eCC--- Confidence 666667777775533 3345777777653 45799999999999999999999999999999997 443 Q ss_pred CHHHHHHHHHHHHhcCCCeEEecCCCcCCCCcceEEEEEEEEeC Q lcl|NC_012884. 75 DLEELESELYSKIFDDNYLISSSTGFIVDDETKHYELRLKVTKE 118 (118) Q Consensus 75 d~~~~E~~L~k~f~~ngW~i~~s~~h~~DPdT~Q~t~tfyv~K~ 118 (118) +..++..++-++|..+|+.-.++ ...++|||+=.-+...|..- T Consensus 74 ~~~~i~~~I~~~m~~~gf~r~~~-~d~ye~dt~lyhk~~Rf~~~ 116 (119) T protein:vir:10 74 STTAIHQKVNEIMKRIGFSRYAV-ADLYEEDTQIFHYAMRFAKG 116 (119) T ss_pred CHHHHHHHHHHHHHHcCCeeecc-CCCcCChhhhheeeeeeeee Confidence 57789999999999999997655 46899999988888888877 No 24 >protein:vir:105008 Length: 119 # NCBI annotation: conserved structural protein # Family: family:all:517 # MgeID: mge:1490 # MgeName: W Beta # Cross-refs: genbank:acc:YP_459973;genbank:gi:85701388;genbank:GeneID:3882149 Probab=97.40 E-value=7.4e-06 Score=48.72 Aligned_cols=109 Identities=7% Similarity=0.070 Sum_probs=88.4 Q ss_pred CchHHHHHHHHhCCc------cchhhhcCCCCCceEcCCceeEEEEEecccCcccccCCeeeeEEEEEEEEEEEeccCCC Q lcl|NC_012884. 1 MSLVSDVKNILLSTG------KIDKVFIDNLPPQKTIDENITFAILSRAGVSLREFGNDKVNIISHEADVLISAKSDIDF 74 (118) Q Consensus 1 m~~V~d~~~~i~~~~------wiD~vy~~~iP~e~~~~~d~T~vLite~~~~p~~ygN~~f~~~~~~veIQIFyk~~~~~ 74 (118) |.-...++++|.+-+ .-++||-...|.. .++|.+.+.+..+.|+.||.|....-.+.++|-|| +++ T Consensus 2 ~~i~~~I~~~L~~~~~l~~l~~~~~I~~~~~~~~----~~~p~I~~~~~~~~p~~~add~e~~~~~~~QIDVw-sk~--- 73 (119) T protein:vir:10 2 INLRPDILQALENDQELVSLLGGKRIYYRKAKKA----EEFPRITYFELDNRPDGFADNQEIESEILFQVDVW-AKS--- 73 (119) T ss_pred CchHHHHHHHhhcCchhhhhcCCceEEecccCCC----CCCcEEEEEecCCCCCcccCCceeeeEEEEEEEEe-eCC--- Confidence 666667777775533 3345777777653 45799999999999999999999999999999997 443 Q ss_pred CHHHHHHHHHHHHhcCCCeEEecCCCcCCCCcceEEEEEEEEeC Q lcl|NC_012884. 75 DLEELESELYSKIFDDNYLISSSTGFIVDDETKHYELRLKVTKE 118 (118) Q Consensus 75 d~~~~E~~L~k~f~~ngW~i~~s~~h~~DPdT~Q~t~tfyv~K~ 118 (118) +..++..++-++|..+|+.-.++ ...++|||+=.-+...|..- T Consensus 74 ~~~~i~~~I~~~m~~~gf~r~~~-~d~ye~dt~lyhk~~Rf~~~ 116 (119) T protein:vir:10 74 STTAIHQKVNEIMKRIGFSRYAV-ADLYEEDTQIFHYAMRFAKG 116 (119) T ss_pred CHHHHHHHHHHHHHHcCCeeecc-CCCcCChhhhheeeeeeeee Confidence 57789999999999999997655 46899999988888888877 No 25 >protein:vir:98343 Length: 126 # NCBI annotation: hypothetical protein # Family: family:all:517 # MgeID: mge:1581 # MgeName: phiPVL(108) # Cross-refs: genbank:acc:YP_918935;genbank:gi:119443697;genbank:GeneID:4594505 Probab=97.38 E-value=3.2e-06 Score=50.72 Aligned_cols=110 Identities=8% Similarity=0.068 Sum_probs=85.1 Q ss_pred HHHHHHHHhCCccc-----hhhhcCCCCCceE--cCCceeEEEEEecccCcccccCCeeeeEEEEEEEEEEEeccCCCCH Q lcl|NC_012884. 4 VSDVKNILLSTGKI-----DKVFIDNLPPQKT--IDENITFAILSRAGVSLREFGNDKVNIISHEADVLISAKSDIDFDL 76 (118) Q Consensus 4 V~d~~~~i~~~~wi-----D~vy~~~iP~e~~--~~~d~T~vLite~~~~p~~ygN~~f~~~~~~veIQIFyk~~~~~d~ 76 (118) ..+.+.+| +.+.| |.+-+.++|-... ...++|-+...|..+.|+.||.|........++|-||++++ |. T Consensus 1 ~~~~~k~l-~~~~I~~li~~~L~~~nvpv~~~~y~~~~~tyItf~ey~~~~~~yaDD~e~~t~~~iQVDIw~sk~---d~ 76 (126) T protein:vir:98 1 MINVTKLI-RNAIIANNITDEVNVFNYTIDDHFHEKTDKPIIRIYPLPFNPDTYADDNEISREYHYQIDVWWSQD---EP 76 (126) T ss_pred Cccchhhh-hhhHHHHhhhhhhhccCceeeeeeecCCCceEEEEEeecCCCCcccccceeeeEEEEEEEEeecCC---CH Confidence 33444454 22333 3444557776554 34677999999999999999999999999999999998886 57 Q ss_pred HHHHHHHHHHHhcCCCeEEecCCCcCCCCcceEEEEEEEEeC Q lcl|NC_012884. 77 EELESELYSKIFDDNYLISSSTGFIVDDETKHYELRLKVTKE 118 (118) Q Consensus 77 ~~~E~~L~k~f~~ngW~i~~s~~h~~DPdT~Q~t~tfyv~K~ 118 (118) .+++.++.++|..+|.+=.++ ...++|||+=.-+.+.|.=. T Consensus 77 ~~l~~~V~~lMk~~GF~r~~~-~dlYE~DtklyHk~~RF~~~ 117 (126) T protein:vir:98 77 NEQAEKIVELLKVINFQCYYR-EPLYESDVMSFRHIIRAKGS 117 (126) T ss_pred HHHHHHHHHHHHHcCCeeeec-CCCccchhhhheeeeeeeee Confidence 788999999999999996544 44899999888888887444 No 26 >protein:vir:9415 Length: 126 # NCBI annotation: phi PVL orf 12-like protein # Family: family:all:517 # MgeID: mge:167 # MgeName: phi 13 # Cross-refs: genbank:acc:NP_803393;genbank:gi:29028705;genbank:GeneID:1258143 Probab=97.38 E-value=3.2e-06 Score=50.72 Aligned_cols=110 Identities=8% Similarity=0.068 Sum_probs=85.1 Q ss_pred HHHHHHHHhCCccc-----hhhhcCCCCCceE--cCCceeEEEEEecccCcccccCCeeeeEEEEEEEEEEEeccCCCCH Q lcl|NC_012884. 4 VSDVKNILLSTGKI-----DKVFIDNLPPQKT--IDENITFAILSRAGVSLREFGNDKVNIISHEADVLISAKSDIDFDL 76 (118) Q Consensus 4 V~d~~~~i~~~~wi-----D~vy~~~iP~e~~--~~~d~T~vLite~~~~p~~ygN~~f~~~~~~veIQIFyk~~~~~d~ 76 (118) ..+.+.+| +.+.| |.+-+.++|-... ...++|-+...|..+.|+.||.|........++|-||++++ |. T Consensus 1 ~~~~~k~l-~~~~I~~li~~~L~~~nvpv~~~~y~~~~~tyItf~ey~~~~~~yaDD~e~~t~~~iQVDIw~sk~---d~ 76 (126) T protein:vir:94 1 MINVTKLI-RNAIIANNITDEVNVFNYTIDDHFHEKTDKPIIRIYPLPFNPDTYADDNEISREYHYQIDVWWSQD---EP 76 (126) T ss_pred Cccchhhh-hhhHHHHhhhhhhhccCceeeeeeecCCCceEEEEEeecCCCCcccccceeeeEEEEEEEEeecCC---CH Confidence 33444454 22333 3444557776554 34677999999999999999999999999999999998886 57 Q ss_pred HHHHHHHHHHHhcCCCeEEecCCCcCCCCcceEEEEEEEEeC Q lcl|NC_012884. 77 EELESELYSKIFDDNYLISSSTGFIVDDETKHYELRLKVTKE 118 (118) Q Consensus 77 ~~~E~~L~k~f~~ngW~i~~s~~h~~DPdT~Q~t~tfyv~K~ 118 (118) .+++.++.++|..+|.+=.++ ...++|||+=.-+.+.|.=. T Consensus 77 ~~l~~~V~~lMk~~GF~r~~~-~dlYE~DtklyHk~~RF~~~ 117 (126) T protein:vir:94 77 NEQAEKIVELLKVINFQCYYR-EPLYESDVMSFRHIIRAKGS 117 (126) T ss_pred HHHHHHHHHHHHHcCCeeeec-CCCccchhhhheeeeeeeee Confidence 788999999999999996544 44899999888888887444 No 27 >protein:vir:78349 Length: 127 # NCBI annotation: gp10 # Family: family:all:508 # MgeID: mge:1850 # MgeName: B025 # Cross-refs: genbank:acc:YP_001468649;genbank:gi:157325227;genbank:GeneID:5601695 Probab=97.27 E-value=3.3e-06 Score=50.60 Aligned_cols=114 Identities=10% Similarity=0.118 Sum_probs=81.5 Q ss_pred CchHHHHHHHHhCCc---cc--hhhhcCCCCCceEcCCceeEEEEEecccC-cccccCCeeeeEEEEEEEEEEEeccCCC Q lcl|NC_012884. 1 MSLVSDVKNILLSTG---KI--DKVFIDNLPPQKTIDENITFAILSRAGVS-LREFGNDKVNIISHEADVLISAKSDIDF 74 (118) Q Consensus 1 m~~V~d~~~~i~~~~---wi--D~vy~~~iP~e~~~~~d~T~vLite~~~~-p~~ygN~~f~~~~~~veIQIFyk~~~~~ 74 (118) |--+.+++++|.+=. .+ .+||...+|+.. +.+++.++|++..+. |+.||+|+.-.-...++|-|+.+.... T Consensus 2 ~d~l~~iy~~L~~d~~l~~~~~~~I~~~~~Pe~~--d~~~p~I~I~~i~~p~p~~yadn~~l~~~~~~QIDV~s~~r~~- 78 (127) T protein:vir:78 2 IDILNVIYTTLSKNDIIHTTCEERIKYYDFPGTG--DSTKTFLLIIPLDVPIPTNFSSNESRMEDFLVQIDVQSNDRLI- 78 (127) T ss_pred cchHHHHHHHhhcchhhhhhcCCceEEEecCCCc--cccCcEEEEeeCCCCCCCcccCCccceeEEEEEEEEEEcCCCc- Confidence 788888999984422 23 268888898865 477899999999874 999999999999999999998766443 Q ss_pred CHHHHHHHHHHHHhcCCCeEEecCCCcCCCCcceEEEEEEEEeC Q lcl|NC_012884. 75 DLEELESELYSKIFDDNYLISSSTGFIVDDETKHYELRLKVTKE 118 (118) Q Consensus 75 d~~~~E~~L~k~f~~ngW~i~~s~~h~~DPdT~Q~t~tfyv~K~ 118 (118) ...+--++-++|..+||.=.++--.-+||||+-.-..-.+.-- T Consensus 79 -~~~i~~~I~~~M~~~gf~q~s~~~d~Y~~dtk~y~~arRYrg~ 121 (127) T protein:vir:78 79 -VKKIQDEVRKEMKQIGFGQLAGGLDEYFPETGRFVDARKYSGL 121 (127) T ss_pred -hHHHHHHHHHHHHHcCceeccCCCCccchhhhhhhheeeeeec Confidence 3355556667777899994444325569997644443333111 No 28 >protein:vir:1387 Length: 116 # NCBI annotation: Gp10 protein # Family: family:all:517 # MgeID: mge:314 # MgeName: phi3626 # Cross-refs: genbank:acc:NP_612839;genbank:gi:20065973;genbank:GeneID:935788 Probab=96.32 E-value=7e-05 Score=43.37 Aligned_cols=107 Identities=14% Similarity=0.173 Sum_probs=77.8 Q ss_pred CchHHHHHHHHh--CCccchhhhcCCCCCceEcCCceeEEEEEecccCcccccCCeeeeEEEEEEEEEEEeccCCCCHHH Q lcl|NC_012884. 1 MSLVSDVKNILL--STGKIDKVFIDNLPPQKTIDENITFAILSRAGVSLREFGNDKVNIISHEADVLISAKSDIDFDLEE 78 (118) Q Consensus 1 m~~V~d~~~~i~--~~~wiD~vy~~~iP~e~~~~~d~T~vLite~~~~p~~ygN~~f~~~~~~veIQIFyk~~~~~d~~~ 78 (118) |+=-..+..+|. +.+=...-| ..+.++|-+...+..+.|..||+|........++|-||=|..... .+ T Consensus 4 m~I~~~i~~~Lk~i~ipV~~~~y--------~~~~~~~~Itf~~y~e~~~~yaDd~e~~t~~~iQVDI~sk~~~~~--~~ 73 (116) T protein:vir:13 4 FDIIALVYECLECLNVPVIEGWY--------DEELNKTHITVHEYLEQDESFEDDEAREEEHNIQIDVWSKDSLEA--FK 73 (116) T ss_pred cchhHHHHHHHhhcCCeeeeccc--------CCCCccceEEEEeeecCCCcccCCeeeeEEEEEEEEEeecCCccH--HH Confidence 666556666652 222111111 123457999999999999999999999999999999997655442 36 Q ss_pred HHHHHHHHHhcCCCeEEecCCCcCCCCcceEEEEEEEEeC Q lcl|NC_012884. 79 LESELYSKIFDDNYLISSSTGFIVDDETKHYELRLKVTKE 118 (118) Q Consensus 79 ~E~~L~k~f~~ngW~i~~s~~h~~DPdT~Q~t~tfyv~K~ 118 (118) ++.++.++|.++|..=.+ -...++|||+=.-+.+.|+.- T Consensus 74 l~~~V~~lMk~~GF~r~~-~~d~ye~dt~iyhk~~RF~y~ 112 (116) T protein:vir:13 74 LKKAIKKLLKKNNFYFDS-SEDFYETKTRIYHKGLRFSYI 112 (116) T ss_pred HHHHHHHHHHHcCCEeee-cCCCccchhhhhhhhhhheee Confidence 889999999999998655 557799999866666666555 No 29 >protein:vir:96002 Length: 133 # NCBI annotation: ORF024 # Family: family:all:508 # MgeID: mge:1594 # MgeName: 2638A # Cross-refs: genbank:acc:YP_239806;genbank:gi:66395472;genbank:GeneID:5132919 Probab=96.19 E-value=7.6e-05 Score=43.15 Aligned_cols=112 Identities=12% Similarity=0.158 Sum_probs=82.5 Q ss_pred CchHHHHHHHHhCC------ccchhhhcCCCCCceEcCCceeEEEEEeccc-CcccccCCeeeeEEEEEEEEEEEeccCC Q lcl|NC_012884. 1 MSLVSDVKNILLST------GKIDKVFIDNLPPQKTIDENITFAILSRAGV-SLREFGNDKVNIISHEADVLISAKSDID 73 (118) Q Consensus 1 m~~V~d~~~~i~~~------~wiD~vy~~~iP~e~~~~~d~T~vLite~~~-~p~~ygN~~f~~~~~~veIQIFyk~~~~ 73 (118) |--...++++|.+= -.-++|+....|+.. +.+++.++|+++.. .|+.||+|+.-+...-++|-+|=+.+-+ T Consensus 2 ~diL~eIy~~L~~d~~L~~~v~~~~Ik~~~~Pe~~--d~~~p~IvI~pi~~p~p~~f~sn~~ls~~~~~QIDV~sk~~~~ 79 (133) T protein:vir:96 2 IDILMEVYNILKSDDDLMRLIDKKNIKFNQYPDVK--DKMAPYIVIDDYDDPIPEWHSDGDRIAYNYAFQIDVMVKASDA 79 (133) T ss_pred cchHHHHHHHhhcchHHHHhcCccceEEeecCCcc--ccccceEEEecCCCCCcccccCcceeeeEEEEEEeeeeecccc Confidence 44455667777432 233468999999854 57789999999888 8999999999999999999999887654 Q ss_pred CCH----HHHHHHHHHHHhcCCCeEEecCCCcCCCCcceEEEEEEEEeC Q lcl|NC_012884. 74 FDL----EELESELYSKIFDDNYLISSSTGFIVDDETKHYELRLKVTKE 118 (118) Q Consensus 74 ~d~----~~~E~~L~k~f~~ngW~i~~s~~h~~DPdT~Q~t~tfyv~K~ 118 (118) .+- .++-.++-++|..+||.=.++-..-+||||+- |--+|+ T Consensus 80 ~~~R~~~~~i~~rI~~~m~~~gf~Q~~~~~deYd~et~~----y~~aRR 124 (133) T protein:vir:96 80 YNARKRRNEISNRISELLWKNQMKQIRNLGNEYDKNLAL----YRSTRR 124 (133) T ss_pred ccchhhhHHHHHHHHHHHHHcCceecCCCccccchhhhh----hhhhhe Confidence 432 45556677888889998666655678998853 333344 No 30 >protein:vir:9514 Length: 135 # NCBI annotation: hypothetical protein # Family: family:all:508 # MgeID: mge:170 # MgeName: phiN315 # Cross-refs: genbank:acc:NP_835561;genbank:gi:30043946;genbank:GeneID:1260543 Probab=94.21 E-value=0.00061 Score=38.19 Aligned_cols=112 Identities=10% Similarity=0.154 Sum_probs=79.8 Q ss_pred CchHHHHHHHHhCC------ccchhhhcCCCCCceEcCCceeEEEEEeccc-CcccccCCeeeeEEEEEEEEEEEeccCC Q lcl|NC_012884. 1 MSLVSDVKNILLST------GKIDKVFIDNLPPQKTIDENITFAILSRAGV-SLREFGNDKVNIISHEADVLISAKSDID 73 (118) Q Consensus 1 m~~V~d~~~~i~~~------~wiD~vy~~~iP~e~~~~~d~T~vLite~~~-~p~~ygN~~f~~~~~~veIQIFyk~~~~ 73 (118) |--...++++|.+= -..++|+....|+.. +.+++.++|++++. .|+.||+|+.-+-..-++|-+|=|.+-. T Consensus 2 ~diL~eIy~~L~~d~~L~~~v~~~rIk~~~~Pe~~--d~~~p~IvI~pl~~p~p~~~~sn~~ls~~~~~QIDV~~k~~~~ 79 (135) T protein:vir:95 2 IDILYKVHEVISQDRIIREHVNINNIKFNKYPNVK--DTDVPFIVIDDIDDPIPTTYTDGDECAYSYIVQIDVFVKYNDE 79 (135) T ss_pred cchHHHHHHHhhcchHHHhhcCccceEEEecCCcc--ccccceEEEecCCCCCCccccCchhceeeeeEEEeeeeecccc Confidence 44455667777331 233599999999955 57789999999987 7999999999999999999999988755 Q ss_pred CCH----HHHHHHHHHHH-hcCCCeEEecCCCcCCCCcceEEEEEEEEeC Q lcl|NC_012884. 74 FDL----EELESELYSKI-FDDNYLISSSTGFIVDDETKHYELRLKVTKE 118 (118) Q Consensus 74 ~d~----~~~E~~L~k~f-~~ngW~i~~s~~h~~DPdT~Q~t~tfyv~K~ 118 (118) .+- .++=-.+-+.| ..+||.=.++-..-+||||+- |--+|+ T Consensus 80 ~~~R~~~~~i~~~I~~~l~~~~~f~q~s~~ldeY~~et~~----y~~aRR 125 (135) T protein:vir:95 80 YNARIIRNKISNRIQKLLWSELKMGNVSNGKPEYIEEFKT----YRSSRV 125 (135) T ss_pred cchhhHHHHHHHHHHHHHHHHcCccccCCCCccchhhhhh----hhhhhe Confidence 432 12233466677 467998666655668999853 222333 No 31 >protein:vir:100675 Length: 135 # NCBI annotation: 77ORF027 # Family: family:all:508 # MgeID: mge:1476 # MgeName: 77 # Cross-refs: genbank:acc:NP_958611;genbank:gi:41189540;genbank:GeneID:2743821 Probab=94.21 E-value=0.00061 Score=38.19 Aligned_cols=112 Identities=10% Similarity=0.154 Sum_probs=79.8 Q ss_pred CchHHHHHHHHhCC------ccchhhhcCCCCCceEcCCceeEEEEEeccc-CcccccCCeeeeEEEEEEEEEEEeccCC Q lcl|NC_012884. 1 MSLVSDVKNILLST------GKIDKVFIDNLPPQKTIDENITFAILSRAGV-SLREFGNDKVNIISHEADVLISAKSDID 73 (118) Q Consensus 1 m~~V~d~~~~i~~~------~wiD~vy~~~iP~e~~~~~d~T~vLite~~~-~p~~ygN~~f~~~~~~veIQIFyk~~~~ 73 (118) |--...++++|.+= -..++|+....|+.. +.+++.++|++++. .|+.||+|+.-+-..-++|-+|=|.+-. T Consensus 2 ~diL~eIy~~L~~d~~L~~~v~~~rIk~~~~Pe~~--d~~~p~IvI~pl~~p~p~~~~sn~~ls~~~~~QIDV~~k~~~~ 79 (135) T protein:vir:10 2 IDILYKVHEVISQDRIIREHVNINNIKFNKYPNVK--DTDVPFIVIDDIDDPIPTTYTDGDECAYSYIVQIDVFVKYNDE 79 (135) T ss_pred cchHHHHHHHhhcchHHHhhcCccceEEEecCCcc--ccccceEEEecCCCCCCccccCchhceeeeeEEEeeeeecccc Confidence 44455667777331 233599999999955 57789999999987 7999999999999999999999988755 Q ss_pred CCH----HHHHHHHHHHH-hcCCCeEEecCCCcCCCCcceEEEEEEEEeC Q lcl|NC_012884. 74 FDL----EELESELYSKI-FDDNYLISSSTGFIVDDETKHYELRLKVTKE 118 (118) Q Consensus 74 ~d~----~~~E~~L~k~f-~~ngW~i~~s~~h~~DPdT~Q~t~tfyv~K~ 118 (118) .+- .++=-.+-+.| ..+||.=.++-..-+||||+- |--+|+ T Consensus 80 ~~~R~~~~~i~~~I~~~l~~~~~f~q~s~~ldeY~~et~~----y~~aRR 125 (135) T protein:vir:10 80 YNARIIRNKISNRIQKLLWSELKMGNVSNGKPEYIEEFKT----YRSSRV 125 (135) T ss_pred cchhhHHHHHHHHHHHHHHHHcCccccCCCCccchhhhhh----hhhhhe Confidence 432 12233466677 467998666655668999853 222333 No 32 >protein:vir:101303 Length: 135 # NCBI annotation: hypothetical protein # Family: family:all:508 # MgeID: mge:1591 # MgeName: phiNM3 # Cross-refs: genbank:acc:YP_908836;genbank:gi:118725100;genbank:GeneID:4555874 Probab=94.21 E-value=0.00061 Score=38.19 Aligned_cols=112 Identities=10% Similarity=0.154 Sum_probs=79.8 Q ss_pred CchHHHHHHHHhCC------ccchhhhcCCCCCceEcCCceeEEEEEeccc-CcccccCCeeeeEEEEEEEEEEEeccCC Q lcl|NC_012884. 1 MSLVSDVKNILLST------GKIDKVFIDNLPPQKTIDENITFAILSRAGV-SLREFGNDKVNIISHEADVLISAKSDID 73 (118) Q Consensus 1 m~~V~d~~~~i~~~------~wiD~vy~~~iP~e~~~~~d~T~vLite~~~-~p~~ygN~~f~~~~~~veIQIFyk~~~~ 73 (118) |--...++++|.+= -..++|+....|+.. +.+++.++|++++. .|+.||+|+.-+-..-++|-+|=|.+-. T Consensus 2 ~diL~eIy~~L~~d~~L~~~v~~~rIk~~~~Pe~~--d~~~p~IvI~pl~~p~p~~~~sn~~ls~~~~~QIDV~~k~~~~ 79 (135) T protein:vir:10 2 IDILYKVHEVISQDRIIREHVNINNIKFNKYPNVK--DTDVPFIVIDDIDDPIPTTYTDGDECAYSYIVQIDVFVKYNDE 79 (135) T ss_pred cchHHHHHHHhhcchHHHhhcCccceEEEecCCcc--ccccceEEEecCCCCCCccccCchhceeeeeEEEeeeeecccc Confidence 44455667777331 233599999999955 57789999999987 7999999999999999999999988755 Q ss_pred CCH----HHHHHHHHHHH-hcCCCeEEecCCCcCCCCcceEEEEEEEEeC Q lcl|NC_012884. 74 FDL----EELESELYSKI-FDDNYLISSSTGFIVDDETKHYELRLKVTKE 118 (118) Q Consensus 74 ~d~----~~~E~~L~k~f-~~ngW~i~~s~~h~~DPdT~Q~t~tfyv~K~ 118 (118) .+- .++=-.+-+.| ..+||.=.++-..-+||||+- |--+|+ T Consensus 80 ~~~R~~~~~i~~~I~~~l~~~~~f~q~s~~ldeY~~et~~----y~~aRR 125 (135) T protein:vir:10 80 YNARIIRNKISNRIQKLLWSELKMGNVSNGKPEYIEEFKT----YRSSRV 125 (135) T ss_pred cchhhHHHHHHHHHHHHHHHHcCccccCCCCccchhhhhh----hhhhhe Confidence 432 12233466677 467998666655668999853 222333 No 33 >protein:vir:9648 Length: 126 # NCBI annotation: hypothetical protein # Family: family:all:508 # MgeID: mge:173 # MgeName: 315.1 # Cross-refs: genbank:acc:NP_795410;genbank:gi:28876183;genbank:GeneID:1257699 Probab=86.30 E-value=0.011 Score=31.42 Aligned_cols=114 Identities=11% Similarity=0.100 Sum_probs=72.9 Q ss_pred Cch-HHHHHHHHhCCccch--hhhcCCCCCceEcCCceeEEEEEeccc-CcccccCCeeeeEEEEEEEEEEEeccCCCCH Q lcl|NC_012884. 1 MSL-VSDVKNILLSTGKID--KVFIDNLPPQKTIDENITFAILSRAGV-SLREFGNDKVNIISHEADVLISAKSDIDFDL 76 (118) Q Consensus 1 m~~-V~d~~~~i~~~~wiD--~vy~~~iP~e~~~~~d~T~vLite~~~-~p~~ygN~~f~~~~~~veIQIFyk~~~~~d~ 76 (118) |-- ....+++|.+=.-|+ +|+-+-.|+.. +++++.++|+.++. .|+.||+|+.-+...-++|-+-+....--+ T Consensus 2 m~DiL~~Iy~~L~~d~~l~~~rIk~~~~Pe~~--d~~~p~IvI~pl~~P~p~~~~sd~~ls~~ylyQIDVes~~r~~~~- 78 (126) T protein:vir:96 2 VRDMLAEVFDLLKADNVLKLVKIKSFERPESL--LDDQTSIVILPITAPKQSTFGSDTALSKKFLYQIEVESTSRLECK- 78 (126) T ss_pred hhHHHHHHHHHHhccceecceeeeeeecCCCC--CCCcceEEEeeCCCCCCccccCchhhhhhceeeEeeeecCccchH- Confidence 221 123455553322333 77888888865 78899999999977 999999999999999999999776654433 Q ss_pred HHHHHHHHHHHhcCCCeEEecCCCcCCCCcceEEEEEEEEeC Q lcl|NC_012884. 77 EELESELYSKIFDDNYLISSSTGFIVDDETKHYELRLKVTKE 118 (118) Q Consensus 77 ~~~E~~L~k~f~~ngW~i~~s~~h~~DPdT~Q~t~tfyv~K~ 118 (118) ++--++-++|...|..=.++-..-++|||+-.-.+=.+..- T Consensus 79 -~i~~rI~~~l~~igf~q~s~gldeY~~etkry~daRRYrg~ 119 (126) T protein:vir:96 79 -DLQCRIEKQLEKIGFYQNDAGFERFDRDTGRYLDARTFRGF 119 (126) T ss_pred -HHHHHHHHHHHHcCccccccCcchhhhhhhhhhhhheeccc Confidence 34444555666677654444446688888643222111111 No 34 >protein:vir:98629 Length: 126 # NCBI annotation: hypothetical protein # Family: family:all:508 # MgeID: mge:1601 # MgeName: phi3396 # Cross-refs: genbank:acc:YP_001039928;genbank:gi:126011103;genbank:GeneID:4818465 Probab=75.26 E-value=0.05 Score=27.71 Aligned_cols=110 Identities=12% Similarity=0.135 Sum_probs=70.3 Q ss_pred Cch-HHHHHHHHhCCccch--hhhcCCCCCceEcCCceeEEEEEeccc-CcccccCCeeeeEEEEEEEEEEEeccCCCCH Q lcl|NC_012884. 1 MSL-VSDVKNILLSTGKID--KVFIDNLPPQKTIDENITFAILSRAGV-SLREFGNDKVNIISHEADVLISAKSDIDFDL 76 (118) Q Consensus 1 m~~-V~d~~~~i~~~~wiD--~vy~~~iP~e~~~~~d~T~vLite~~~-~p~~ygN~~f~~~~~~veIQIFyk~~~~~d~ 76 (118) |-- .....++|.+=.-|+ +|+-+-.|+.. ++++|.++|+..+. .|+.||+|+--+...-++|-+=+....- . T Consensus 2 m~DiL~~Iy~~L~~d~~i~~~~Ikfye~Pe~~--d~~~p~IVI~Pl~~P~p~~~~sd~~ls~~y~yQIDVes~~R~~--~ 77 (126) T protein:vir:98 2 VRDMLAEVFDLLKADNVLKLVKIKSFERPESL--LDDQTSIVILPITAPKQSTFGSDTALSKKFLYQIEVESTSRLE--C 77 (126) T ss_pred hhHHHHHHHHHHhcCceeceeeeeeeecCCcc--ccCcceEEEeeCCCCCcccccCChhhheeeeeeeecccccccc--h Confidence 221 234455553222222 88889999866 78999999999865 9999999999888888888883332222 2 Q ss_pred HHHHHHHHHHHhcCCCeEEecCCCcCCCCcceEEEEEEEEeC Q lcl|NC_012884. 77 EELESELYSKIFDDNYLISSSTGFIVDDETKHYELRLKVTKE 118 (118) Q Consensus 77 ~~~E~~L~k~f~~ngW~i~~s~~h~~DPdT~Q~t~tfyv~K~ 118 (118) .++--++-++|...|.-=.++-..-+||+|+-... +|+ T Consensus 78 ~~i~~rI~~~l~~~gf~q~~~gldeY~~Et~ryvd----aRr 115 (126) T protein:vir:98 78 KDLQRRIEKQLEKIGFYQNDAGFERFDRDTGRYLD----ART 115 (126) T ss_pred HHHHHHHHHHHHHcCccccccCcchhhhhhhhhhh----hhh Confidence 23444456666667765445555668888864322 233 No 35 >protein:vir:1892 Length: 121 # NCBI annotation: gp11 # Family: family:all:896 # MgeID: mge:41 # MgeName: HK022 # Cross-refs: genbank:acc:NP_037672;genbank:gi:9634130;genbank:GeneID:1262490 Probab=60.24 E-value=0.31 Score=23.36 Aligned_cols=110 Identities=15% Similarity=0.102 Sum_probs=68.7 Q ss_pred Cch-------HHHHHHHHhCCccchhhhcCCCCCceEcCCceeEEEEEecccCcccccCCeeeeEEEEEEEEEEEeccCC Q lcl|NC_012884. 1 MSL-------VSDVKNILLSTGKIDKVFIDNLPPQKTIDENITFAILSRAGVSLREFGNDKVNIISHEADVLISAKSDID 73 (118) Q Consensus 1 m~~-------V~d~~~~i~~~~wiD~vy~~~iP~e~~~~~d~T~vLite~~~~p~~ygN~~f~~~~~~veIQIFyk~~~~ 73 (118) |-. -+-++.+|+...- .+||...++|+. +-.=-+..+.+...|..|-+.....-...++|-+|-+.-.+ T Consensus 1 m~~~i~~~l~~d~~v~allg~~~-~Rvyp~~~aP~~---~~~Pyiv~q~vsg~p~~~l~G~~~~~~~~vQIDvyA~t~~~ 76 (121) T protein:vir:18 1 MIAPIFSVCASSPEVTDLLGSNP-VRIYPFGIQDDN---VVYPYVVWQNITGSPENYIAQRPDADFFTLQVDAYADTVDE 76 (121) T ss_pred CchHHHHHHhcChhhhhhhcCCC-ceeeeccCCCCc---CcCCeEEEEEecCcccceecCCCCcceeEEEEEeecCCHHH Confidence 321 2222223222211 389986554433 22447888999999999999987777888999998776433 Q ss_pred CCHHHHHHHHHHHHhcCCCeEEecCCCcCCCCcceEE----EEEEEEe Q lcl|NC_012884. 74 FDLEELESELYSKIFDDNYLISSSTGFIVDDETKHYE----LRLKVTK 117 (118) Q Consensus 74 ~d~~~~E~~L~k~f~~ngW~i~~s~~h~~DPdT~Q~t----~tfyv~K 117 (118) -..+-.++...+...+.. .....+.+||||+=.- ..+.+.| T Consensus 77 --A~~l~~avr~Ale~~~~~-~~~~~~~ye~dT~lyR~s~Dv~~~~~r 121 (121) T protein:vir:18 77 --VIAVATALRDAIEPHAHI-TRWGGQERDPETKRYRYSFDVDWIVTR 121 (121) T ss_pred --HHHHHHHHHHHhhhcCcc-cCCCCCCCcccccceeeeeEEEEeecC Confidence 224444566666667764 4566788999996443 4455556 No 36 >protein:vir:93602 Length: 114 # NCBI annotation: putative structural component # Family: family:all:896 # MgeID: mge:157 # MgeName: phi 4795 # Cross-refs: genbank:acc:YP_001449300;genbank:gi:157166048;uniprot:Q6H9U1;genbank:GeneID:5580424 Probab=52.72 E-value=0.55 Score=22.02 Aligned_cols=111 Identities=14% Similarity=0.048 Sum_probs=71.2 Q ss_pred CchHHHHHHHHhCC-ccchhhhcCCCCCce-EcCCceeEEEEEecccCcccccCCeeeeEEEEEEEEEEEeccCCCCHHH Q lcl|NC_012884. 1 MSLVSDVKNILLST-GKIDKVFIDNLPPQK-TIDENITFAILSRAGVSLREFGNDKVNIISHEADVLISAKSDIDFDLEE 78 (118) Q Consensus 1 m~~V~d~~~~i~~~-~wiD~vy~~~iP~e~-~~~~d~T~vLite~~~~p~~ygN~~f~~~~~~veIQIFyk~~~~~d~~~ 78 (118) |.. ++.+.+|... +. +||.+-.|... ...+-.--+.-+.+...|.++=.. ...-+..|+|-+|-+.-. +-.. T Consensus 1 M~e-~~i~~lL~~~~~g--Rvyp~~~P~~~~~~~~~~Pyiv~q~vsg~p~~~l~g-p~~~~~~vQIDvyA~t~~--~A~~ 74 (114) T protein:vir:93 1 MTE-ADLYPHLAHLAGG--QVYPYVVPLLDGRPSVALPWVVFSLISSVSADVMGG-QAESSVSVQIDVYAGTVT--QARQ 74 (114) T ss_pred Cch-HHHHHHHHhhcCc--ccccccCCcccCcCCccCceEEEEeccCcccccccC-ccccceEEEEEeeeCCHH--HHHH Confidence 995 8888887443 33 99999888742 223445567777777777666444 333466777777765442 4557 Q ss_pred HHHHHHHHHhcCCCeEEecCCCcCCCCcceEEEEEEEEeC Q lcl|NC_012884. 79 LESELYSKIFDDNYLISSSTGFIVDDETKHYELRLKVTKE 118 (118) Q Consensus 79 ~E~~L~k~f~~ngW~i~~s~~h~~DPdT~Q~t~tfyv~K~ 118 (118) +..++.+++....-. .....+.+||||+-.-.++=|+== T Consensus 75 l~~~v~~Al~~~~~~-~~~~~~~ye~dt~lyR~~~d~~v~ 113 (114) T protein:vir:93 75 IRQDAREAIMLLAPG-SVSEMQDYIPENRCYRATLEFQVT 113 (114) T ss_pred HHHHHHHHHhhcCcE-eecCCCcccccccceeeEEEEEEe Confidence 777888888866654 345667789999765544432222 No 37 >protein:vir:4348 Length: 121 # NCBI annotation: Orf15 # Family: family:all:896 # MgeID: mge:93 # MgeName: D3 # Cross-refs: genbank:acc:NP_061511;genbank:gi:9635607;genbank:GeneID:1262874 Probab=38.92 E-value=1 Score=20.48 Aligned_cols=110 Identities=17% Similarity=0.160 Sum_probs=68.0 Q ss_pred Cch-------HHHHHHHHhCCccchhhhcCCCCCceEcCCceeEEEEEecccCcccccCCeeeeEEEEEEEEEEEeccCC Q lcl|NC_012884. 1 MSL-------VSDVKNILLSTGKIDKVFIDNLPPQKTIDENITFAILSRAGVSLREFGNDKVNIISHEADVLISAKSDID 73 (118) Q Consensus 1 m~~-------V~d~~~~i~~~~wiD~vy~~~iP~e~~~~~d~T~vLite~~~~p~~ygN~~f~~~~~~veIQIFyk~~~~ 73 (118) |-. -+-++.+|+.-.- -+||..-++|+. +-.==+..+++...|..|-.+....-...++|-+|-+.-. T Consensus 1 m~~~i~~~l~~d~~v~allg~~~-~Rvyp~~~aP~~---~~~Pyiv~q~vsg~p~~~l~g~~~~~~~~vQIDvyA~t~~- 75 (121) T protein:vir:43 1 MYPPIFKVCSSSPAVTAILGASP-LRMYQFGLAPQL---VVKPYATWQTISGSPENYLWGRPDADGFTIQVDIFSATAA- 75 (121) T ss_pred CChHHHHHHhhChhhhhhhcCCC-ceeeccCCCCCC---CcCCeEEEEEecCcccceecCCCCcceeEEEEEeeeCCHH- Confidence 432 1122222222111 279986555543 2244788999999999999998877788899999866542 Q ss_pred CCHHHHHHHHHHHHhcCCCeEEecCCCcCCCCcceEEEE----EEEEe Q lcl|NC_012884. 74 FDLEELESELYSKIFDDNYLISSSTGFIVDDETKHYELR----LKVTK 117 (118) Q Consensus 74 ~d~~~~E~~L~k~f~~ngW~i~~s~~h~~DPdT~Q~t~t----fyv~K 117 (118) +-..+-.++...+...+..+ ...+..+||||+=.-.+ +.+.| T Consensus 76 -~A~~l~~av~~Al~~~~~~~-~~~~~~ye~dT~lyR~s~Dv~w~~~r 121 (121) T protein:vir:43 76 -EARDAAKAIRDAIELSAYVV-RWGGESVDPDTKTYRVSFDVDWIVQR 121 (121) T ss_pred -HHHHHHHHHHHHhhhcCCcc-cCCCCCCcccccceeeeeEEEEeecC Confidence 33455566777777666643 45667899999643333 34444 No 38 >protein:vir:3874 Length: 114 # NCBI annotation: putative head-tail joining protein # Family: family:all:28620 # MgeID: mge:82 # MgeName: A2 # Cross-refs: genbank:acc:NP_680491;swissprot:trembl:p94215;genbank:gi:22296531;uniprot:P94215;genbank:GeneID:951676 Probab=25.17 E-value=2.1 Score=18.83 Aligned_cols=108 Identities=15% Similarity=0.127 Sum_probs=74.4 Q ss_pred CchHHHHHHHH-hCCccchhhhcCCCCCceE-----cCCceeEEEEEecccCcccccCCeeeeEEEEEEEEEEEeccCCC Q lcl|NC_012884. 1 MSLVSDVKNIL-LSTGKIDKVFIDNLPPQKT-----IDENITFAILSRAGVSLREFGNDKVNIISHEADVLISAKSDIDF 74 (118) Q Consensus 1 m~~V~d~~~~i-~~~~wiD~vy~~~iP~e~~-----~~~d~T~vLite~~~~p~~ygN~~f~~~~~~veIQIFyk~~~~~ 74 (118) |.-=..+..+| ++.+-++.+|.+- |.+-- ....--=+.||-.-.+-+.|+.|.=..---+|||--|-.-.... T Consensus 1 ~~PE~~vaDiLsad~~lv~~mYipi-ft~tpdd~fik~SsAPWiRiTpiPGDda~yaDD~R~~EYPrVqVDfWvr~e~~d 79 (114) T protein:vir:38 1 MAPEKRVYDILSANLDIADKVYIGT-PNFNNQTSATPESLAPWVRITYLPGDAADYADDSRILEYPKVQVDFWVGITDWD 79 (114) T ss_pred CCchhhhhhhhccchhhhhheeccC-CCCCCCCcccccccCCeeEeeecCCccccccccceeeecCceeEEEeeccCChh Confidence 65555555555 4667888888653 23211 11112237899999999999988766666789999888877777 Q ss_pred CHHHHHHHHHHHHhcCCCeEEecCCCcCCCCcceEEE Q lcl|NC_012884. 75 DLEELESELYSKIFDDNYLISSSTGFIVDDETKHYEL 111 (118) Q Consensus 75 d~~~~E~~L~k~f~~ngW~i~~s~~h~~DPdT~Q~t~ 111 (118) -+.++|..+...|.++||. ..=+.++.|- ..|..+ T Consensus 80 ~~e~iqe~IY~~Lha~gwe-RYY~nsY~D~-~~~~~~ 114 (114) T protein:vir:38 80 QQEKIETQIYQALHAADWE-RYYRNSYVDG-IPQPFA 114 (114) T ss_pred hHHHHHHHHHHHHHhcCcc-eeeeccccCC-CCCCCC Confidence 8889999999999999998 3555666553 234433 No 39 >protein:vir:1438 Length: 115 # NCBI annotation: hypothetical protein # Family: family:all:2712 # MgeID: mge:30 # MgeName: phiE125 # Cross-refs: genbank:acc:NP_536367;genbank:gi:17975172;genbank:GeneID:929144 Probab=23.80 E-value=1.3 Score=19.96 Aligned_cols=105 Identities=14% Similarity=0.108 Sum_probs=58.7 Q ss_pred CchHHHHHHHHhCCccchhhhcCCCCCceEcCCceeEEEEEecccCcccccCCeeeeEEEEEEEEEEEeccCCCC--HHH Q lcl|NC_012884. 1 MSLVSDVKNILLSTGKIDKVFIDNLPPQKTIDENITFAILSRAGVSLREFGNDKVNIISHEADVLISAKSDIDFD--LEE 78 (118) Q Consensus 1 m~~V~d~~~~i~~~~wiD~vy~~~iP~e~~~~~d~T~vLite~~~~p~~ygN~~f~~~~~~veIQIFyk~~~~~d--~~~ 78 (118) |++. -+.++|....- -+||.+..|++.. .=-+..+.+...|..+=+...-.-...|+|.+|-+.-.+-. ... T Consensus 1 ~~~~-~i~~aL~~l~~-~RVyp~~aP~~~~----~Pyiv~q~vsg~p~~~L~G~~~~~~~~vQIDvyA~t~~~A~~l~~~ 74 (115) T protein:vir:14 1 MSVI-VIRDALQGIGG-AKGYLGVAPAKAP----APYFVVTRVHGALDMALAGLTGGRSGSYQIDCYAPTFTDADRLADL 74 (115) T ss_pred CeeE-eeehhhccccc-cccccccCCCCCC----CCEEEEEeecCcccccccCCCCCcceEEEEEEeeCCHHHHHHHHHH Confidence 5442 34444433322 4999999987543 34577788888888887666666688899998876543311 111 Q ss_pred HHHHHHHHHhcCCCeE---EecCCCcCCCCcceEEEEEEEEeC Q lcl|NC_012884. 79 LESELYSKIFDDNYLI---SSSTGFIVDDETKHYELRLKVTKE 118 (118) Q Consensus 79 ~E~~L~k~f~~ngW~i---~~s~~h~~DPdT~Q~t~tfyv~K~ 118 (118) ++..++. ..+|.- .....+.+||||+= +.++=| T Consensus 75 v~~~~~~---~~~~~~~~~~~~~~d~ye~dt~l----yR~s~D 110 (115) T protein:vir:14 75 AVDRAMS---VQDRFSVGGVDELPDDYSEDTGL----FRISLE 110 (115) T ss_pred HHHHHhc---CccceeeeeecCCCCCCcccccc----eeeEEE Confidence 1222222 233332 23455679999962 222222 No 40 >protein:vir:97070 Length: 118 # NCBI annotation: hypothetical protein # Family: family:all:3244 # MgeID: mge:1653 # MgeName: OP1 # Cross-refs: genbank:acc:YP_453569;genbank:gi:84662604;genbank:GeneID:5142485 Probab=22.79 E-value=2.4 Score=18.50 Aligned_cols=112 Identities=17% Similarity=0.110 Sum_probs=67.5 Q ss_pred CchHHHHHHHHhCCccchhhhcCCCCCceEcCCceeEEEEEecccCcccccCC-eeeeEEEEEEEEEEEeccCCCCHHHH Q lcl|NC_012884. 1 MSLVSDVKNILLSTGKIDKVFIDNLPPQKTIDENITFAILSRAGVSLREFGND-KVNIISHEADVLISAKSDIDFDLEEL 79 (118) Q Consensus 1 m~~V~d~~~~i~~~~wiD~vy~~~iP~e~~~~~d~T~vLite~~~~p~~ygN~-~f~~~~~~veIQIFyk~~~~~d~~~~ 79 (118) ||.-.+.+++|..... .+||.+-.|++.. -.--+..+.+...|..|=.+ .......+|+|-+|-+.-.+ ...+ T Consensus 1 M~~e~~l~a~L~~~~~-~Rvyp~~aP~~~~---~~Pyiv~q~vsg~p~~~ldG~~~~~~~~rvQIdvyA~t~~~--A~~l 74 (118) T protein:vir:97 1 MSYGRMLKDLLDPVFS-GRVYADIPPDSPP---LDAYAIYQRVGGVPVYWKEGGMPDKVNARVQVQIWSRSKQE--AYLA 74 (118) T ss_pred CchHHHHHHHHhhhcC-CccccccCCCCCC---cCCEEEEEecCCcccccccCCCCCccceeEEEEEeeCCHHH--HHHH Confidence 9999999999854432 5899999998642 13578889999999988755 35566677888887664432 3334 Q ss_pred HHHHHHHHhcCCC-eEEecCCCcCCCCcceE--EEEEEEEeC Q lcl|NC_012884. 80 ESELYSKIFDDNY-LISSSTGFIVDDETKHY--ELRLKVTKE 118 (118) Q Consensus 80 E~~L~k~f~~ngW-~i~~s~~h~~DPdT~Q~--t~tfyv~K~ 118 (118) -.++.+.|..-.- .+.......+||||+=. +.-|.+-=+ T Consensus 75 ~~av~~al~~~~~~~~~~~~~~~ye~dt~lyr~~~Df~iw~~ 116 (118) T protein:vir:97 75 TVQVLRIVSEANDMQVLSQPIDDYVRELKLYGSRVDISMWYN 116 (118) T ss_pred HHHHHHHhhcccccccccCCcccccccCCceEEEEEEEEEee Confidence 4455555532111 12122334589998522 122222222 Done!