Query lcl|NC_011703.1_cdsid_YP_002364336.1 [gene=PP141_gp28] [protein=hypothetical protein] [protein_id=YP_002364336.1] [location=17937..18488] Match_columns 183 No_of_seqs 13 out of 16 Neff 3.9 Searched_HMMs 1612 Date Thu Nov 7 13:48:02 2013 Command /home/guerois/workspace/virfam/python/lib/hhsearch//hhsearch2 -i .//seq/seq_28 -d /home/guerois/workspace/virfam/python/profile_database/capsid_neck_tail.hhm -glob -cpu 7 -o .//seq/HHR/seq_28_vs_rec_db.hhr No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM 1 protein:vir:96106 Length: 183 100.0 4.8E-93 3E-96 526.7 16.3 183 1-183 1-183 (183) 2 protein:vir:99607 Length: 186 100.0 1E-82 6.2E-86 470.1 16.0 178 1-183 1-178 (186) 3 protein:vir:107715 Length: 189 100.0 7.6E-83 4.7E-86 470.8 15.3 183 1-183 1-189 (189) 4 protein:vir:3637 Length: 178 # 99.2 7.2E-13 4.5E-16 87.1 14.6 163 1-183 9-174 (178) 5 protein:vir:101569 Length: 178 99.2 1.2E-12 7.2E-16 86.0 14.5 163 1-183 9-174 (178) 6 protein:vir:94061 Length: 175 99.1 3.9E-12 2.4E-15 83.1 14.0 160 1-183 8-167 (175) 7 protein:vir:106763 Length: 178 99.1 6.3E-12 3.9E-15 82.0 14.5 160 1-183 9-168 (178) 8 protein:vir:78612 Length: 178 99.1 8.1E-12 5E-15 81.4 14.5 163 1-183 9-174 (178) 9 protein:vir:5259 Length: 213 # 98.5 4.3E-09 2.7E-12 66.4 10.6 157 1-183 47-207 (213) 10 protein:vir:10368 Length: 118 66.7 0.26 0.00016 23.8 10.0 113 1-165 1-118 (118) 11 protein:vir:81066 Length: 118 63.9 0.31 0.00019 23.4 8.7 118 1-165 1-118 (118) 12 protein:vir:97070 Length: 118 47.1 0.71 0.00044 21.4 8.9 118 1-165 1-118 (118) 13 protein:vir:9514 Length: 135 # 42.6 0.75 0.00046 21.3 5.8 115 1-148 1-135 (135) 14 protein:vir:101303 Length: 135 42.6 0.75 0.00046 21.3 5.8 115 1-148 1-135 (135) 15 protein:vir:100675 Length: 135 42.6 0.75 0.00046 21.3 5.8 115 1-148 1-135 (135) 16 protein:vir:80105 Length: 162 28.7 1.7 0.0011 19.3 9.8 153 1-183 7-160 (162) No 1 >protein:vir:96106 Length: 183 # NCBI annotation: hypothetical protein ORF027 # Family: family:all:7160 # MgeID: mge:1597 # MgeName: F8 # Cross-refs: genbank:acc:YP_001294444;genbank:gi:149408341;genbank:GeneID:5237225 Probab=100.00 E-value=4.8e-93 Score=526.70 Aligned_cols=183 Identities=91% Similarity=1.373 Sum_probs=182.4 Q ss_pred CchHHHHHHHHHHHHHHHHhccccccCccceeeecccccccccCCCCeEEEEeccCcccCCccceeeecccccceeeece Q lcl|NC_011703. 1 MFDGELIAKMVVELNAAMASAQEALQFPDFEVVQKAQPTQQGTSTRPTIFFQKLFDIPRGWPATDWYLDNTARKYVEITR 80 (183) Q Consensus 1 MtD~eL~~~i~~~l~~~la~~g~~l~~~d~~V~q~~QPtqQG~~~~~~i~f~~i~~~~~Gw~~r~y~~d~~~~~~~~~e~ 80 (183) |||||||+|++.+|+++|.++.+++++||++|+|+|||||||+||+++|||+||++++||||+|+|+||+++++++|+|+ T Consensus 1 M~D~eLi~~v~~~i~~~~l~~l~~~~~~d~~V~q~fQPtqQG~~~~~~i~f~~i~~~~~Gw~~r~~~yd~~~~~~~~iet 80 (183) T protein:vir:96 1 MFDGELIEKLVVELTSAMTSAKETLQFPDFEVVQKAQPTQQGTSTKPAIFFQKLFDIPRGWPATDWYLDNAARKYVEITR 80 (183) T ss_pred CCchhHHHHHHHHHHHHHHHHHHhccCCCeeEEecccccccccccCCeEEEEecCCCCCCCcccccccccccchhhhhhh Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred eeeeeEEEEEEEeeeCCCcccccCHHHHHHHHHHHHhhhHHHHHHHHcCcceeeeccccccceeccCCCcccCceeeEEE Q lcl|NC_011703. 81 QHVETTFQISSLHWQNPEITHVVTASDIANYVRAYFQARSTIERVKELDFLILRVSQISNEAFENDNHQFEFHPSFDMVV 160 (183) Q Consensus 81 Qi~e~tyQi~~l~~~~p~~~~~~TAsDv~~~vr~i~qS~~f~~~l~k~gvgi~Ra~~Ir~~~f~~D~~~fe~~PsFd~~v 160 (183) ||+|+|||||||+||||++|++||||||+++||||+||++|+++|+|+||||||||+||++||+||+++||+||||||+| T Consensus 81 Ql~e~TyQiqalv~~d~~~~~~~TA~Dv~~~vR~i~qS~~f~~~l~~q~vgI~RaseIr~~~f~nD~~~~E~~PsFd~~v 160 (183) T protein:vir:96 81 QHVETTFQISSLHWQNPELDHVVTAADIANYVRAYFQARSTIQRVKELDFLILRVSHISNEAFENDNHQFEFHPSFDMVV 160 (183) T ss_pred eeeeeeEEEEEeeccCccchhhhhHHHHHHHHHHHHhhHHHHHHHHhcCcceeccccccccccccCCCCCCcCceeEEEE Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred EeeeEEeeccchhhhcceeeecC Q lcl|NC_011703. 161 TYNQYIRLYENAAYSADGVLIGI 183 (183) Q Consensus 161 Th~~~i~~~t~aV~~~d~v~~g~ 183 (183) ||+++|+++||||+|||+|++|| T Consensus 161 Th~~~it~~t~av~~~~~~~~~~ 183 (183) T protein:vir:96 161 TYNQYIRLHENAAYSADGVLIGI 183 (183) T ss_pred EeeeeEeecchhhhhcceeeeeC Confidence 99999999999999999999999 No 2 >protein:vir:99607 Length: 186 # NCBI annotation: hypothetical protein # Family: family:all:7160 # MgeID: mge:1544 # MgeName: BcepF1 # Cross-refs: genbank:acc:YP_001039797;genbank:gi:126011047;genbank:GeneID:4818302 Probab=100.00 E-value=1e-82 Score=470.14 Aligned_cols=178 Identities=39% Similarity=0.499 Sum_probs=173.8 Q ss_pred CchHHHHHHHHHHHHHHHHhccccccCccceeeecccccccccCCCCeEEEEeccCcccCCccceeeecccccceeeece Q lcl|NC_011703. 1 MFDGELIAKMVVELNAAMASAQEALQFPDFEVVQKAQPTQQGTSTRPTIFFQKLFDIPRGWPATDWYLDNTARKYVEITR 80 (183) Q Consensus 1 MtD~eL~~~i~~~l~~~la~~g~~l~~~d~~V~q~~QPtqQG~~~~~~i~f~~i~~~~~Gw~~r~y~~d~~~~~~~~~e~ 80 (183) |+||||+++||++|+++|+++|+. ++|+|+|||||||++++++|||.++++++||||.+++.||.++++++|+|+ T Consensus 1 M~dneL~~~ir~~L~a~L~sqg~~-----~~Vv~~fQPtqQG~~~~~~~Ff~~~~~~~~G~~~q~r~y~~~~~~~~~iet 75 (186) T protein:vir:99 1 MTDLELIDTVVPYIEAAIASQGWP-----FLVVQKDQPTQQGVPSIGTVFFELLFNIEYGSPATENQYNAASNQFDEIET 75 (186) T ss_pred CCchhHHHHHHHHHHHHHHhcCCC-----ceeeccccCcccCccCCCeEEEEeccCCcccCChhhcccccccccceeehh Confidence 999999999999999999999955 699999999999999999999999999999999999899999999999999 Q ss_pred eeeeeEEEEEEEeeeCCCcccccCHHHHHHHHHHHHhhhHHHHHHHHcCcceeeeccccccceeccCCCcccCceeeEEE Q lcl|NC_011703. 81 QHVETTFQISSLHWQNPEITHVVTASDIANYVRAYFQARSTIERVKELDFLILRVSQISNEAFENDNHQFEFHPSFDMVV 160 (183) Q Consensus 81 Qi~e~tyQi~~l~~~~p~~~~~~TAsDv~~~vr~i~qS~~f~~~l~k~gvgi~Ra~~Ir~~~f~~D~~~fe~~PsFd~~v 160 (183) ||+|+|||||||+||||++|++||||||+++||||+||++|+++|+|+||||||||+||++||+||+++||+||||||+| T Consensus 76 Ql~e~TyQiqalv~~d~~~~~~~TA~Dv~~~vR~i~qS~~fi~~l~~q~vgI~RaseIr~~~f~nD~~~~E~~PsFdi~v 155 (186) T protein:vir:99 76 QLVITTIQISALIPQDPKNIDQPTANDVLQYVKRYVASRNIARELVKKKVNIYRVSEVRAQWFEDDNHQFSNHPNFDLEV 155 (186) T ss_pred eeeeeeEEEEEeeccCccchhhhhHHHHHHHHHHHHhhHHHHHHHHhcCcceeccccccccccccCCCCCccCceeEEEE Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred EeeeEEeeccchhhhcceeeecC Q lcl|NC_011703. 161 TYNQYIRLYENAAYSADGVLIGI 183 (183) Q Consensus 161 Th~~~i~~~t~aV~~~d~v~~g~ 183 (183) ||+++|+++||||+|||+++|-- T Consensus 156 Th~~~it~~t~av~~~~p~~~~~ 178 (186) T protein:vir:99 156 THSGKVTFSVAAVDRCDPLEVPP 178 (186) T ss_pred EeeeeEeechhhhhhcccccCCC Confidence 99999999999999999999854 No 3 >protein:vir:107715 Length: 189 # NCBI annotation: gp18 # Family: family:all:7160 # MgeID: mge:1520 # MgeName: BcepB1A # Cross-refs: genbank:acc:YP_024866;genbank:gi:48697508;genbank:GeneID:2948331 Probab=100.00 E-value=7.6e-83 Score=470.80 Aligned_cols=183 Identities=21% Similarity=0.311 Sum_probs=173.1 Q ss_pred CchHHHHHHHHHHHHHHHHhcccc----ccCccceeeec-ccccccccCCCCeEEEEeccCcccCCccc-eeeecccccc Q lcl|NC_011703. 1 MFDGELIAKMVVELNAAMASAQEA----LQFPDFEVVQK-AQPTQQGTSTRPTIFFQKLFDIPRGWPAT-DWYLDNTARK 74 (183) Q Consensus 1 MtD~eL~~~i~~~l~~~la~~g~~----l~~~d~~V~q~-~QPtqQG~~~~~~i~f~~i~~~~~Gw~~r-~y~~d~~~~~ 74 (183) |+||||+++||++|+++|+++|.+ |+|||+.++++ |||||||+|++++|||+||++++||||+| +++||.++++ T Consensus 1 M~dn~l~~~ir~~L~a~L~~~g~~~~~t~~~p~~~~V~~afQPtqQG~~~~~~iff~~i~~~~~G~p~r~~~~~~~~~~~ 80 (189) T protein:vir:10 1 MDENQLLIVLIAMLDAGLAAYAANPLNTRSLPDGITSQRAFQPRQEGAPEGPAIIINHTLTRQIGFPKRFSKQLNPPDGD 80 (189) T ss_pred CchhhHHHHHHHHHHHHHHHhcccchhhccccccceeeecccccccccccCCeEEEeeccccCcccccccccccccccch Confidence 999999999999999999999985 89999876555 99999999999999999999999999999 7899999999 Q ss_pred eeeeceeeeeeEEEEEEEeeeCCCcccccCHHHHHHHHHHHHhhhHHHHHHHHcCcceeeeccccccceeccCCCcccCc Q lcl|NC_011703. 75 YVEITRQHVETTFQISSLHWQNPEITHVVTASDIANYVRAYFQARSTIERVKELDFLILRVSQISNEAFENDNHQFEFHP 154 (183) Q Consensus 75 ~~~~e~Qi~e~tyQi~~l~~~~p~~~~~~TAsDv~~~vr~i~qS~~f~~~l~k~gvgi~Ra~~Ir~~~f~~D~~~fe~~P 154 (183) ++|+|+||+|+|||||||+||+|++|++||||||+++||||+||++|+++|+|+||||||||+||++||+||+++||+|| T Consensus 81 ~~~ietQ~~e~TyQiqalv~~d~~~~~~~TA~Dv~~~vR~i~qS~~f~~~l~~q~vgI~RaseIr~~~f~nD~~~~E~~P 160 (189) T protein:vir:10 81 WIKVQGQRYESTYHIEALIPQSPAEPNAMTESDVLNVARFILQSDEAVAFLTPQNIGLLRVTELRSNYIIDDKEQNENVP 160 (189) T ss_pred hhhhhheeeeeeeEEEEeeccCccchhhhhHHHHHHHHHHHHhhHHHHHHHHhcCcceeccccccccccccCCCCCccCc Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred eeeEEEEeeeEEeeccchhhhcceeeecC Q lcl|NC_011703. 155 SFDMVVTYNQYIRLYENAAYSADGVLIGI 183 (183) Q Consensus 155 sFd~~vTh~~~i~~~t~aV~~~d~v~~g~ 183 (183) ||||+|||+++++++||||++--.++--| T Consensus 161 sFd~~vTh~~~~t~~t~~v~~~~~~~hRi 189 (189) T protein:vir:10 161 FFEITFSHRIEFSATVPLIDVFKTVFNRV 189 (189) T ss_pred eeEEEEEecceeecccceeeeeccccccC Confidence 99999999999999988886544444444 No 4 >protein:vir:3637 Length: 178 # NCBI annotation: gp05 # Family: family:all:3176 # MgeID: mge:75 # MgeName: Bcep781 # Cross-refs: genbank:acc:NP_705632;genbank:gi:23752317;genbank:gi:47835036;genbank:GeneID:955731 Probab=99.22 E-value=7.2e-13 Score=87.15 Aligned_cols=163 Identities=13% Similarity=0.073 Sum_probs=131.8 Q ss_pred CchHHHHHHHHHHHHHHHHhccccccCccceeeecccccccccCCCCeEEEEeccCcccCCccceeeecccccceeeece Q lcl|NC_011703. 1 MFDGELIAKMVVELNAAMASAQEALQFPDFEVVQKAQPTQQGTSTRPTIFFQKLFDIPRGWPATDWYLDNTARKYVEITR 80 (183) Q Consensus 1 MtD~eL~~~i~~~l~~~la~~g~~l~~~d~~V~q~~QPtqQG~~~~~~i~f~~i~~~~~Gw~~r~y~~d~~~~~~~~~e~ 80 (183) -|..+|.+++|.-|++.+. . +++.+|.+++|= .-..|.+++|..+|+...+.+...+.| |...+.. --+ T Consensus 9 ~Te~di~~alr~fL~~lf~--p----~~~~eVi~gqqN-~~p~P~g~fiimt~l~~~~lsT~~~~Y--~~~~~~~--~~~ 77 (178) T protein:vir:36 9 PSEDEVFDTLWEWVTSLFD--P----ASAAQIAKADQN-ATSTLYGTYALIRPGVREALNQTIRSY--DATAQTV--ANE 77 (178) T ss_pred ccHHHHHHHHHHHHHHHcC--C----CCCceEEeeccc-CCCcCCCCEEEEecccccccccceeec--CCcchhe--eee Confidence 6788999999999888765 1 356789999885 445677899999999999999999998 7777643 244 Q ss_pred eeeeeEEEEEEEeeeCCCcccccCHHHHHHHHHHHHhhhHHHHHHHHcCcceeeeccccccceeccCCCcccCceeeEEE Q lcl|NC_011703. 81 QHVETTFQISSLHWQNPEITHVVTASDIANYVRAYFQARSTIERVKELDFLILRVSQISNEAFENDNHQFEFHPSFDMVV 160 (183) Q Consensus 81 Qi~e~tyQi~~l~~~~p~~~~~~TAsDv~~~vr~i~qS~~f~~~l~k~gvgi~Ra~~Ir~~~f~~D~~~fe~~PsFd~~v 160 (183) |..+-.+||+-. -+.|+|-+.....+.-|.=.|++|++-++.=+++++-|...|+|+.+|||.+|+++++. T Consensus 78 ~~~~~~~QvD~Y---------G~~A~d~A~~i~tl~Rs~~a~~~f~~~~iaPLYad~p~qlp~iN~e~QyE~Rwt~~~~l 148 (178) T protein:vir:36 78 LHTGYWYQVDCY---------GPQAPDWANTIAAMWRTMWSADALRGTALIPLYADQPQQLNIVNGEGQYEQRYMVKLHA 148 (178) T ss_pred eeeEEEEEEEee---------cCChhHHHHHHHHHhcChhHHHHHhcCccccccCCCccccCccCccccccceEEEEEEE Confidence 556788888874 22688889999999999999999998778899999999999999999999999999999 Q ss_pred EeeeEEeeccchhhhcceeeec---C Q lcl|NC_011703. 161 TYNQYIRLYENAAYSADGVLIG---I 183 (183) Q Consensus 161 Th~~~i~~~t~aV~~~d~v~~g---~ 183 (183) .++-.++..-.-..+++....= | T Consensus 149 Q~Np~vt~pqdFfd~~~~~~~~~vd~ 174 (178) T protein:vir:36 149 QVNQVETAPQLFFTEAPATTATPVDI 174 (178) T ss_pred EeeeEEeehhhhcccCccceeeeccc Confidence 9999998775555555433221 1 No 5 >protein:vir:101569 Length: 178 # NCBI annotation: gp05 # Family: family:all:3176 # MgeID: mge:1477 # MgeName: Bcep43 # Cross-refs: genbank:acc:NP_958109;genbank:gi:41057655;genbank:GeneID:2716826 Probab=99.19 E-value=1.2e-12 Score=86.02 Aligned_cols=163 Identities=13% Similarity=0.085 Sum_probs=129.9 Q ss_pred CchHHHHHHHHHHHHHHHHhccccccCccceeeecccccccccCCCCeEEEEeccCcccCCccceeeecccccceeeece Q lcl|NC_011703. 1 MFDGELIAKMVVELNAAMASAQEALQFPDFEVVQKAQPTQQGTSTRPTIFFQKLFDIPRGWPATDWYLDNTARKYVEITR 80 (183) Q Consensus 1 MtD~eL~~~i~~~l~~~la~~g~~l~~~d~~V~q~~QPtqQG~~~~~~i~f~~i~~~~~Gw~~r~y~~d~~~~~~~~~e~ 80 (183) -|..+|.+++|.-|++.+. . +++.+|.+++|= .-..|.+++|..+|+...+.+...+.| |...+.. --+ T Consensus 9 ~Te~di~~alr~fL~~lf~--p----~~~~eVi~gqqN-~~p~P~g~fiimt~l~~~~lsT~~~~Y--~~~~~~~--~~~ 77 (178) T protein:vir:10 9 PSEDEVFDTLWEWVTSLFD--P----ASAAQIAKADQN-ATSTLYGTYALIRPGVREALNQTIRSY--DATAQTV--ANE 77 (178) T ss_pred ccHHHHHHHHHHHHHHHcC--C----CCCceEEeeccc-CCCcCCCCEEEEecccccccccceeec--CCcchhe--eee Confidence 6788999999999888765 1 356789999885 445677899999999999999999998 7777643 244 Q ss_pred eeeeeEEEEEEEeeeCCCcccccCHHHHHHHHHHHHhhhHHHHHHHHcCcceeeeccccccceeccCCCcccCceeeEEE Q lcl|NC_011703. 81 QHVETTFQISSLHWQNPEITHVVTASDIANYVRAYFQARSTIERVKELDFLILRVSQISNEAFENDNHQFEFHPSFDMVV 160 (183) Q Consensus 81 Qi~e~tyQi~~l~~~~p~~~~~~TAsDv~~~vr~i~qS~~f~~~l~k~gvgi~Ra~~Ir~~~f~~D~~~fe~~PsFd~~v 160 (183) |..+-.+||+-. -+.|+|-+.....+.-|.=.|++|++-++.=+++++-|...|+|+.+|||.+|+++++. T Consensus 78 ~~~~~~~QvD~Y---------G~~A~d~A~~i~tl~Rs~~a~~~f~~~~iaPLYad~p~qlp~iN~e~QyE~Rwt~~~~l 148 (178) T protein:vir:10 78 LHTGYWYQVDCY---------GPQAPDWANTIAAMWRTMWSADALRGTALIPLYADQPQQLNIVNGEGQYEQRYMVKLHA 148 (178) T ss_pred eeeEEEEEEEee---------cCChhHHHHHHHHHhcChhHHHHHhcCccccccCCCccccCccCccccccceEEEEEEE Confidence 556788888874 22688889999999999999999998778899999999999999999999999999999 Q ss_pred EeeeEEeeccchhhhccee---eecC Q lcl|NC_011703. 161 TYNQYIRLYENAAYSADGV---LIGI 183 (183) Q Consensus 161 Th~~~i~~~t~aV~~~d~v---~~g~ 183 (183) .++-.++..-.-..+++.- .+-| T Consensus 149 Q~Np~vt~pqdFfd~~~i~~~~~~di 174 (178) T protein:vir:10 149 QVNQVATAPQLFFTEAPATTATPVDI 174 (178) T ss_pred EeeeEEeehhhhccccccccccccce Confidence 9999997764433333321 1112 No 6 >protein:vir:94061 Length: 175 # NCBI annotation: hypothetical protein # Family: family:all:3176 # MgeID: mge:1493 # MgeName: OP2 # Cross-refs: genbank:acc:YP_453620;genbank:gi:84662656;genbank:GeneID:5142571 Probab=99.11 E-value=3.9e-12 Score=83.14 Aligned_cols=160 Identities=14% Similarity=0.116 Sum_probs=129.7 Q ss_pred CchHHHHHHHHHHHHHHHHhccccccCccceeeecccccccccCCCCeEEEEeccCcccCCccceeeecccccceeeece Q lcl|NC_011703. 1 MFDGELIAKMVVELNAAMASAQEALQFPDFEVVQKAQPTQQGTSTRPTIFFQKLFDIPRGWPATDWYLDNTARKYVEITR 80 (183) Q Consensus 1 MtD~eL~~~i~~~l~~~la~~g~~l~~~d~~V~q~~QPtqQG~~~~~~i~f~~i~~~~~Gw~~r~y~~d~~~~~~~~~e~ 80 (183) -|..+|.+++|.-|.+.+.=.+.+ .+|.+++|= .-..|.+++|..+|++..+.+...+.| |...++ ..-+ T Consensus 8 ~Te~di~~alr~fL~~lf~lp~~~-----~eVi~g~qN-~~p~P~g~fi~mt~l~~~~lsT~~~~Y--~~~~g~--~~~~ 77 (175) T protein:vir:94 8 PTEDAVFDAMFGFLAKVLDLPDDT-----QAIIKGFQN-LSSTPTGSCVVVSPGMMTRQDFGSRLY--DPGLSK--VVIE 77 (175) T ss_pred ccHHHHHHHHHHHHHHHcCCCCCC-----ceEEEeccC-CCCccCCCEEEEecccccccccceeee--cccccc--eeee Confidence 677889999998888776433322 479999885 455678999999999999999999988 777665 3344 Q ss_pred eeeeeEEEEEEEeeeCCCcccccCHHHHHHHHHHHHhhhHHHHHHHHcCcceeeeccccccceeccCCCcccCceeeEEE Q lcl|NC_011703. 81 QHVETTFQISSLHWQNPEITHVVTASDIANYVRAYFQARSTIERVKELDFLILRVSQISNEAFENDNHQFEFHPSFDMVV 160 (183) Q Consensus 81 Qi~e~tyQi~~l~~~~p~~~~~~TAsDv~~~vr~i~qS~~f~~~l~k~gvgi~Ra~~Ir~~~f~~D~~~fe~~PsFd~~v 160 (183) +-.+-.+||+-. -+.|.|-+.....+..|.=.|+++.+ .+.=+++++.|...|+|+.+|||.+|+++++. T Consensus 78 ~~~q~~~QvD~Y---------G~~A~d~A~~~~tl~Rs~~a~~~~~~-~~~PLYad~p~qlp~iN~e~QyE~Rwt~~~~l 147 (175) T protein:vir:94 78 AHLTYSYQVDCY---------GPLAPTWASVISVAWKSMWGVDNTAP-AFAPLYADAPQQLNIVNSEGQFEQRFMVRLFG 147 (175) T ss_pred eeeEEEEEEEee---------cCChHHHHHHHHHHhcChhHhhhhhc-ccccccCcCccccCccCccccccceEEEEEEE Confidence 557778888874 22678888888888888888887743 48889999999999999999999999999999 Q ss_pred EeeeEEeeccchhhhcceeeecC Q lcl|NC_011703. 161 TYNQYIRLYENAAYSADGVLIGI 183 (183) Q Consensus 161 Th~~~i~~~t~aV~~~d~v~~g~ 183 (183) .++-.++.. ..=+|.|.+++ T Consensus 148 Q~Np~vt~p---q~F~d~v~v~~ 167 (175) T protein:vir:94 148 QVNQRVALP---QDFFDSVQLTS 167 (175) T ss_pred EeeeEEeee---hhhcccCCcce Confidence 999999776 77778888888 No 7 >protein:vir:106763 Length: 178 # NCBI annotation: gp05 # Family: family:all:3176 # MgeID: mge:1599 # MgeName: Bcep1 # Cross-refs: genbank:acc:NP_944313;genbank:gi:38638612;genbank:GeneID:2657394 Probab=99.09 E-value=6.3e-12 Score=81.98 Aligned_cols=160 Identities=14% Similarity=0.066 Sum_probs=128.1 Q ss_pred CchHHHHHHHHHHHHHHHHhccccccCccceeeecccccccccCCCCeEEEEeccCcccCCccceeeecccccceeeece Q lcl|NC_011703. 1 MFDGELIAKMVVELNAAMASAQEALQFPDFEVVQKAQPTQQGTSTRPTIFFQKLFDIPRGWPATDWYLDNTARKYVEITR 80 (183) Q Consensus 1 MtD~eL~~~i~~~l~~~la~~g~~l~~~d~~V~q~~QPtqQG~~~~~~i~f~~i~~~~~Gw~~r~y~~d~~~~~~~~~e~ 80 (183) -|..+|.+++|.-|++.+-.. + |-+|.+++|= .-..|.+++|..+|+...+.+...+.| |...++.. -+ T Consensus 9 ~Te~di~~alr~fL~~lf~~~-~-----~~eVi~gqqN-~~p~P~g~fiimt~l~~~~lsT~~~~Y--~~~~~~~~--~~ 77 (178) T protein:vir:10 9 PSEDEVFDTLWGWVTSLFDPA-L-----ASQIAKADQN-ATSTLYGTYALIRPGVREALNQTIRTY--DATAGTVS--NE 77 (178) T ss_pred ccHHHHHHHHHHHHHHhcCcc-c-----CceEEEeccC-CCCccCCCEEEEecccccccccceeec--cCCcceee--ee Confidence 678899999998888765321 0 2468888885 445677899999999999999999988 88777633 45 Q ss_pred eeeeeEEEEEEEeeeCCCcccccCHHHHHHHHHHHHhhhHHHHHHHHcCcceeeeccccccceeccCCCcccCceeeEEE Q lcl|NC_011703. 81 QHVETTFQISSLHWQNPEITHVVTASDIANYVRAYFQARSTIERVKELDFLILRVSQISNEAFENDNHQFEFHPSFDMVV 160 (183) Q Consensus 81 Qi~e~tyQi~~l~~~~p~~~~~~TAsDv~~~vr~i~qS~~f~~~l~k~gvgi~Ra~~Ir~~~f~~D~~~fe~~PsFd~~v 160 (183) |..+-++||+-. -+.|+|-+.....+.-|.=.|++|++-++.=+++++=|...|+|+.+|||.+|+++++. T Consensus 78 ~~~~~~~QvD~Y---------G~~A~d~A~~i~tl~Rs~~a~~~f~~~~iaPLYad~P~q~p~iN~e~QyE~Rwt~~~~l 148 (178) T protein:vir:10 78 LHTGYWYQVDCY---------GPQAPDWANTIAAMWRTMWSADALRGTALIPLYADQPQQLNIVNGEGQYEQRYMVKLHA 148 (178) T ss_pred eeeEEEEEEEee---------cCChhHHHHHHHHHhcChhHHHHHhcCcccceecCCcccCCccCccccccceEEEEEEE Confidence 557888899874 22688889999999999999999998778899999999999999999999999999999 Q ss_pred EeeeEEeeccchhhhcceeeecC Q lcl|NC_011703. 161 TYNQYIRLYENAAYSADGVLIGI 183 (183) Q Consensus 161 Th~~~i~~~t~aV~~~d~v~~g~ 183 (183) .++-.++..- .=.|.|.|-- T Consensus 149 Q~Np~vt~pq---dFfd~v~i~~ 168 (178) T protein:vir:10 149 QVNQVATAPQ---QFFTEVPATT 168 (178) T ss_pred EeeeEEeehh---hhcccccccc Confidence 9999997663 3333333311 No 8 >protein:vir:78612 Length: 178 # NCBI annotation: BcepNY3gp04 # Family: family:all:3176 # MgeID: mge:1854 # MgeName: BcepNY3 # Cross-refs: genbank:acc:YP_001294841;genbank:gi:149882904;genbank:GeneID:5291083 Probab=99.08 E-value=8.1e-12 Score=81.40 Aligned_cols=163 Identities=14% Similarity=0.095 Sum_probs=128.7 Q ss_pred CchHHHHHHHHHHHHHHHHhccccccCccceeeecccccccccCCCCeEEEEeccCcccCCccceeeecccccceeeece Q lcl|NC_011703. 1 MFDGELIAKMVVELNAAMASAQEALQFPDFEVVQKAQPTQQGTSTRPTIFFQKLFDIPRGWPATDWYLDNTARKYVEITR 80 (183) Q Consensus 1 MtD~eL~~~i~~~l~~~la~~g~~l~~~d~~V~q~~QPtqQG~~~~~~i~f~~i~~~~~Gw~~r~y~~d~~~~~~~~~e~ 80 (183) -|..+|.+++|.-|++.+-..- +-+|.+++|= .-..|.+++|..+|+...+.+...+.| |...++.. -+ T Consensus 9 ~Te~di~~alr~fL~~lf~~~~------~~eVi~gqqN-~~p~P~g~fiimt~l~~~~lsT~~~~Y--~~~~~~~~--~~ 77 (178) T protein:vir:78 9 PSEDEVFDTLWGWVTSLFDPAL------ASQIAKADQN-ATSTLYGTYALIRPGVREALNQTIRTY--DATAGTVS--NE 77 (178) T ss_pred ccHHHHHHHHHHHHHHhcCccc------CceEEEeccC-CCCccCCCEEEEecccccccccceeec--cCccceee--ee Confidence 6788999999988887653210 2468888885 445677899999999999999999988 88776633 45 Q ss_pred eeeeeEEEEEEEeeeCCCcccccCHHHHHHHHHHHHhhhHHHHHHHHcCcceeeeccccccceeccCCCcccCceeeEEE Q lcl|NC_011703. 81 QHVETTFQISSLHWQNPEITHVVTASDIANYVRAYFQARSTIERVKELDFLILRVSQISNEAFENDNHQFEFHPSFDMVV 160 (183) Q Consensus 81 Qi~e~tyQi~~l~~~~p~~~~~~TAsDv~~~vr~i~qS~~f~~~l~k~gvgi~Ra~~Ir~~~f~~D~~~fe~~PsFd~~v 160 (183) |..+-.+||+-. -+.|+|-+.....+.-|.=.|++|++-++.=+++++=|...|+|+.+|||.+|+++++. T Consensus 78 ~~~~~~~QvD~Y---------G~~A~d~A~~i~tl~Rs~~a~~~f~~~~iaPLYad~P~q~p~iN~e~QyE~Rwt~~~~l 148 (178) T protein:vir:78 78 LHTGYWYQVDCY---------GPQAPDWANTIAAMWRTMWSADALRGTALIPLYADQPQQLNIVNGENQFEQRYMVKLHA 148 (178) T ss_pred eeeEEEEEEEEe---------cCChhHHHHHHHHHhcChhHHHHHhcCcccceecCCcccCCccCccccccceEEEEEEE Confidence 557888898874 22688889999999999999999998778899999999999999999999999999999 Q ss_pred EeeeEEeeccchhhhcceee---ecC Q lcl|NC_011703. 161 TYNQYIRLYENAAYSADGVL---IGI 183 (183) Q Consensus 161 Th~~~i~~~t~aV~~~d~v~---~g~ 183 (183) .++-.++..-.-..++|.-. +-| T Consensus 149 Q~Np~vt~pqdFfd~v~v~~~~~~di 174 (178) T protein:vir:78 149 QVNQVATAPQQFFTEVPATTATPVDI 174 (178) T ss_pred EeeeEEeehhhhccccccceecccce Confidence 99999977644333333211 122 No 9 >protein:vir:5259 Length: 213 # NCBI annotation: hypothetical protein # Family: family:all:4879 # MgeID: mge:117 # MgeName: Aaphi23 # Cross-refs: genbank:acc:NP_852764;genbank:gi:31544039;uniprot:Q7Y5T6;genbank:GeneID:2753558 Probab=98.46 E-value=4.3e-09 Score=66.44 Aligned_cols=157 Identities=18% Similarity=0.198 Sum_probs=118.2 Q ss_pred CchHHH----HHHHHHHHHHHHHhccccccCccceeeecccccccccCCCCeEEEEeccCcccCCccceeeeccccccee Q lcl|NC_011703. 1 MFDGEL----IAKMVVELNAAMASAQEALQFPDFEVVQKAQPTQQGTSTRPTIFFQKLFDIPRGWPATDWYLDNTARKYV 76 (183) Q Consensus 1 MtD~eL----~~~i~~~l~~~la~~g~~l~~~d~~V~q~~QPtqQG~~~~~~i~f~~i~~~~~Gw~~r~y~~d~~~~~~~ 76 (183) |.---| ++.+|.-|... |+|||.-|.-++|| --|-+|+|-.+++-..+.|-..|+. |+.- T Consensus 47 M~TTTvS~lD~~~LRq~ir~L-------l~LPeg~Vid~~~d---a~p~~pFITV~~l~ss~lG~a~reF--dg~r---- 110 (213) T protein:vir:52 47 MDTTTISGFDIVRLRKLIQQA-------LQLPDGVVIGGWLP---ENPLSAFITVDVLMSSETGIARRDF--DGKR---- 110 (213) T ss_pred hhhhccccccHHHHHHHHHHH-------HhCCcceecCCcCC---CCCCCCeEEEeecccchhhhhhhhc--cCch---- Confidence 322111 23445444443 36899999999999 3366699999999999999885554 6322 Q ss_pred eeceeeeeeEEEEEEEeeeCCCcccccCHHHHHHHHHHHHhhhHHHHHHHHcCcceeeeccccccceeccCCCcccCcee Q lcl|NC_011703. 77 EITRQHVETTFQISSLHWQNPEITHVVTASDIANYVRAYFQARSTIERVKELDFLILRVSQISNEAFENDNHQFEFHPSF 156 (183) Q Consensus 77 ~~e~Qi~e~tyQi~~l~~~~p~~~~~~TAsDv~~~vr~i~qS~~f~~~l~k~gvgi~Ra~~Ir~~~f~~D~~~fe~~PsF 156 (183) +.-+-=+|++++|+++=++ |=-++.=++++++|-...+.||..|.||.|.++|+|=.-+-+ +++|++--| T Consensus 111 Evit~S~et~vs~tafGtn---------Ay~ll~kl~a~L~ss~al~~LK~l~aGlVr~S~v~nLsa~ig-gg~e~RArf 180 (213) T protein:vir:52 111 ERITMSMQNTVSFSCFGTN---------AMAQCYKLKAILQSSVILQALKTMNVGIVSFSDVRNLTATIG-SDYEERGQF 180 (213) T ss_pred hhhhhhhccEEEEEEeChh---------HHHHHHHHHHHHhHHHHHHHHHHhccceeeeccccccceecC-CCchhheee Confidence 2244457888899887654 667888899999999999999999999999999999776654 689999999 Q ss_pred eEEEEeeeEEeeccchhhhcceeeecC Q lcl|NC_011703. 157 DMVVTYNQYIRLYENAAYSADGVLIGI 183 (183) Q Consensus 157 d~~vTh~~~i~~~t~aV~~~d~v~~g~ 183 (183) |+.+||.+.+-....++++.|.=-=-| T Consensus 181 dltfsH~HrVet~l~~~~~v~~rt~hi 207 (213) T protein:vir:52 181 DAVFSHHHIVDTPLDPIKRVEQRTNHL 207 (213) T ss_pred eeeeeeeeeeccchHHHHHhhhhhhhH Confidence 999999999977766666666533222 No 10 >protein:vir:10368 Length: 118 # NCBI annotation: conserved phage protein # Family: family:all:3244 # MgeID: mge:183 # MgeName: Xp10 # Cross-refs: genbank:acc:NP_858960;genbank:gi:32128425;genbank:GeneID:2648389 Probab=66.69 E-value=0.26 Score=23.76 Aligned_cols=113 Identities=15% Similarity=0.214 Sum_probs=56.9 Q ss_pred CchHHHHHHHHHHHHHHHHhccccccCccceeeecccccccccCCCCeEEEEeccCcccCCccceeeecccccceeeece Q lcl|NC_011703. 1 MFDGELIAKMVVELNAAMASAQEALQFPDFEVVQKAQPTQQGTSTRPTIFFQKLFDIPRGWPATDWYLDNTARKYVEITR 80 (183) Q Consensus 1 MtD~eL~~~i~~~l~~~la~~g~~l~~~d~~V~q~~QPtqQG~~~~~~i~f~~i~~~~~Gw~~r~y~~d~~~~~~~~~e~ 80 (183) |+=.+. |.+.|+..--. .|.-..-| +|.+.-|+|.++.|+..+ .+.+|++... T Consensus 1 Ms~e~~-------l~a~L~~~~~~------RVyp~~aP--~~~~~~Pyiv~q~vsg~p------~~~l~G~~~~------ 53 (118) T protein:vir:10 1 MSYGRV-------LKDLLDPVFSG------RVYADIPP--DSPPLDAYAIYQRVGGVP------VYWQEGGMPE------ 53 (118) T ss_pred CchHHH-------HHHHHhhhcCC------ccccccCC--CCCCcCCEEEEEecCCcc------cccccCCCCc------ Confidence 553333 33333333222 23333445 777777999998776543 2335654322 Q ss_pred eeeeeEEEEEEEeeeCCCcccccCHHHHHHHHHHHHhhhHHHHHHHHcCcceeeeccccccceeccCCCcc-----cCce Q lcl|NC_011703. 81 QHVETTFQISSLHWQNPEITHVVTASDIANYVRAYFQARSTIERVKELDFLILRVSQISNEAFENDNHQFE-----FHPS 155 (183) Q Consensus 81 Qi~e~tyQi~~l~~~~p~~~~~~TAsDv~~~vr~i~qS~~f~~~l~k~gvgi~Ra~~Ir~~~f~~D~~~fe-----~~Ps 155 (183) ....++||+.. ...+. -|..+...+|..| +.... ...++ ++.+.|| .+=+ T Consensus 54 -~~~~rvQIdvy-A~t~~-----~A~~l~~av~~al---~~~~~----------~~~~~-----~~~d~ye~dt~l~r~~ 108 (118) T protein:vir:10 54 -KVNARVQIQIW-SRSKQ-----EAYLATVQVLRLV---SEAND----------MQVLS-----QPIDDYVREIKLYGSR 108 (118) T ss_pred -cceeEEEEEEe-eCCHH-----HHHHHHHHHHHHh---hhccc----------ceecc-----CCCccccccCCceEEE Confidence 23568999984 33222 2444444443333 22111 11111 2223333 3568 Q ss_pred eeEEEEeeeE Q lcl|NC_011703. 156 FDMVVTYNQY 165 (183) Q Consensus 156 Fd~~vTh~~~ 165 (183) +||.|.|.++ T Consensus 109 ~Df~vw~~~~ 118 (118) T protein:vir:10 109 VDISMWYNLT 118 (118) T ss_pred EEEEEeeecC Confidence 9999999998 No 11 >protein:vir:81066 Length: 118 # NCBI annotation: p13 # Family: family:all:3244 # MgeID: mge:1889 # MgeName: Xop411 # Cross-refs: genbank:acc:YP_001285683;genbank:gi:148727191;genbank:GeneID:5247111 Probab=63.90 E-value=0.31 Score=23.38 Aligned_cols=118 Identities=13% Similarity=0.125 Sum_probs=58.4 Q ss_pred CchHHHHHHHHHHHHHHHHhccccccCccceeeecccccccccCCCCeEEEEeccCcccCCccceeeecccccceeeece Q lcl|NC_011703. 1 MFDGELIAKMVVELNAAMASAQEALQFPDFEVVQKAQPTQQGTSTRPTIFFQKLFDIPRGWPATDWYLDNTARKYVEITR 80 (183) Q Consensus 1 MtD~eL~~~i~~~l~~~la~~g~~l~~~d~~V~q~~QPtqQG~~~~~~i~f~~i~~~~~Gw~~r~y~~d~~~~~~~~~e~ 80 (183) |+ +-..|.+.|+..--. .|...--| +|.+.-|+|.++.|+..+ .+.+|++... T Consensus 1 Ms-------~e~~l~a~L~~~~~~------Rvyp~~aP--~~~~~~Pyiv~q~vsg~p------~~~l~G~~~~------ 53 (118) T protein:vir:81 1 MS-------YGRVLKDLLDPVFSG------RVYADIPP--DSPPLDAYAIYQRVGGVP------VYWQEGGMPE------ 53 (118) T ss_pred Cc-------hHHHHHHHHHhhcCC------ccccccCC--CCCccCceEEEEecCCcc------cccccCCCCC------ Confidence 55 333344444433222 23333445 777767999998776532 2335665432 Q ss_pred eeeeeEEEEEEEeeeCCCcccccCHHHHHHHHHHHHhhhHHHHHHHHcCcceeeeccccccceeccCCCcccCceeeEEE Q lcl|NC_011703. 81 QHVETTFQISSLHWQNPEITHVVTASDIANYVRAYFQARSTIERVKELDFLILRVSQISNEAFENDNHQFEFHPSFDMVV 160 (183) Q Consensus 81 Qi~e~tyQi~~l~~~~p~~~~~~TAsDv~~~vr~i~qS~~f~~~l~k~gvgi~Ra~~Ir~~~f~~D~~~fe~~PsFd~~v 160 (183) ....++||+.. ...+. -|..|...+|..|... .. +...++-+. -+..|-+- .+=++||.| T Consensus 54 -~~~~rvQIdvy-A~t~~-----~A~~l~~av~~al~~~---------~~-~~~~~~~~d-~ye~dt~l--~r~~~Df~i 113 (118) T protein:vir:81 54 -KVNARVQIQIW-SRSKQ-----EAYLATVQVLRLVSEA---------PD-MQVLSQPID-DYVREIKL--YGSRVDVSM 113 (118) T ss_pred -ccceeEEEEEe-eCCHH-----HHHHHHHHHHHHhhhc---------cc-eeeccCCcc-ccccccCc--eeEEEEEEE Confidence 12467899983 33232 2455554444443221 11 111111111 12223333 345999999 Q ss_pred EeeeE Q lcl|NC_011703. 161 TYNQY 165 (183) Q Consensus 161 Th~~~ 165 (183) .|+.+ T Consensus 114 w~~~~ 118 (118) T protein:vir:81 114 WYPIT 118 (118) T ss_pred EecCC Confidence 99998 No 12 >protein:vir:97070 Length: 118 # NCBI annotation: hypothetical protein # Family: family:all:3244 # MgeID: mge:1653 # MgeName: OP1 # Cross-refs: genbank:acc:YP_453569;genbank:gi:84662604;genbank:GeneID:5142485 Probab=47.06 E-value=0.71 Score=21.39 Aligned_cols=118 Identities=12% Similarity=0.150 Sum_probs=58.1 Q ss_pred CchHHHHHHHHHHHHHHHHhccccccCccceeeecccccccccCCCCeEEEEeccCcccCCccceeeecccccceeeece Q lcl|NC_011703. 1 MFDGELIAKMVVELNAAMASAQEALQFPDFEVVQKAQPTQQGTSTRPTIFFQKLFDIPRGWPATDWYLDNTARKYVEITR 80 (183) Q Consensus 1 MtD~eL~~~i~~~l~~~la~~g~~l~~~d~~V~q~~QPtqQG~~~~~~i~f~~i~~~~~Gw~~r~y~~d~~~~~~~~~e~ 80 (183) |+ +...|.+.|+.---. .|--..-| +|.+.-|+|.++.++..+. +.+|++... T Consensus 1 M~-------~e~~l~a~L~~~~~~------Rvyp~~aP--~~~~~~Pyiv~q~vsg~p~------~~ldG~~~~------ 53 (118) T protein:vir:97 1 MS-------YGRMLKDLLDPVFSG------RVYADIPP--DSPPLDAYAIYQRVGGVPV------YWKEGGMPD------ 53 (118) T ss_pred Cc-------hHHHHHHHHhhhcCC------ccccccCC--CCCCcCCEEEEEecCCccc------ccccCCCCC------ Confidence 44 334444444433212 33333445 7777779999988765432 335665332 Q ss_pred eeeeeEEEEEEEeeeCCCcccccCHHHHHHHHHHHHhhhHHHHHHHHcCcceeeeccccccceeccCCCcccCceeeEEE Q lcl|NC_011703. 81 QHVETTFQISSLHWQNPEITHVVTASDIANYVRAYFQARSTIERVKELDFLILRVSQISNEAFENDNHQFEFHPSFDMVV 160 (183) Q Consensus 81 Qi~e~tyQi~~l~~~~p~~~~~~TAsDv~~~vr~i~qS~~f~~~l~k~gvgi~Ra~~Ir~~~f~~D~~~fe~~PsFd~~v 160 (183) ....++||+.. ...+. -|..+...+|..|.. ...+...+-. +.- +..|-+ -.+=++||.| T Consensus 54 -~~~~rvQIdvy-A~t~~-----~A~~l~~av~~al~~---~~~~~~~~~~-------~~~-ye~dt~--lyr~~~Df~i 113 (118) T protein:vir:97 54 -KVNARVQVQIW-SRSKQ-----EAYLATVQVLRIVSE---ANDMQVLSQP-------IDD-YVRELK--LYGSRVDISM 113 (118) T ss_pred -ccceeEEEEEe-eCCHH-----HHHHHHHHHHHHhhc---ccccccccCC-------ccc-ccccCC--ceEEEEEEEE Confidence 23568999983 33232 245554444444322 2112111100 011 122222 2345799999 Q ss_pred EeeeE Q lcl|NC_011703. 161 TYNQY 165 (183) Q Consensus 161 Th~~~ 165 (183) .|+-+ T Consensus 114 w~~~~ 118 (118) T protein:vir:97 114 WYNLT 118 (118) T ss_pred EeecC Confidence 99877 No 13 >protein:vir:9514 Length: 135 # NCBI annotation: hypothetical protein # Family: family:all:508 # MgeID: mge:170 # MgeName: phiN315 # Cross-refs: genbank:acc:NP_835561;genbank:gi:30043946;genbank:GeneID:1260543 Probab=42.60 E-value=0.75 Score=21.28 Aligned_cols=115 Identities=17% Similarity=0.196 Sum_probs=64.3 Q ss_pred CchHHHHHHHHHHHH--HHHHhccccccCccceeeecccccccccCCCCeEEEEeccC-cccCCccceeeecccccceee Q lcl|NC_011703. 1 MFDGELIAKMVVELN--AAMASAQEALQFPDFEVVQKAQPTQQGTSTRPTIFFQKLFD-IPRGWPATDWYLDNTARKYVE 77 (183) Q Consensus 1 MtD~eL~~~i~~~l~--~~la~~g~~l~~~d~~V~q~~QPtqQG~~~~~~i~f~~i~~-~~~Gw~~r~y~~d~~~~~~~~ 77 (183) |-| ++..|...|. +.|++.= ..-.++--..| .-+-.+.|+|.+.|+.+ .|--|.+.++ +. T Consensus 1 m~d--iL~eIy~~L~~d~~L~~~v-----~~~rIk~~~~P-e~~d~~~p~IvI~pl~~p~p~~~~sn~~--------ls- 63 (135) T protein:vir:95 1 MID--ILYKVHEVISQDRIIREHV-----NINNIKFNKYP-NVKDTDVPFIVIDDIDDPIPTTYTDGDE--------CA- 63 (135) T ss_pred Ccc--hHHHHHHHhhcchHHHhhc-----CccceEEEecC-CccccccceEEEecCCCCCCccccCchh--------ce- Confidence 443 3333333332 2233221 00134444566 35556779999998876 3333333222 11 Q ss_pred eceeeeeeEEEEEEEeeeCCCcccccCHHHHHHHHHHHH-hhhHHHHHHHHcCcceeeeccccccc-------------- Q lcl|NC_011703. 78 ITRQHVETTFQISSLHWQNPEITHVVTASDIANYVRAYF-QARSTIERVKELDFLILRVSQISNEA-------------- 142 (183) Q Consensus 78 ~e~Qi~e~tyQi~~l~~~~p~~~~~~TAsDv~~~vr~i~-qS~~f~~~l~k~gvgi~Ra~~Ir~~~-------------- 142 (183) ++=.|||.+++.+..+...+++..||...++.+| .. +|..+.+.....| T Consensus 64 -----~~~~~QIDV~~k~~~~~~~R~~~~~i~~~I~~~l~~~-----------~~f~q~s~~ldeY~~et~~y~~aRRYr 127 (135) T protein:vir:95 64 -----YSYIVQIDVFVKYNDEYNARIIRNKISNRIQKLLWSE-----------LKMGNVSNGKPEYIEEFKTYRSSRVYE 127 (135) T ss_pred -----eeeeEEEeeeeecccccchhhHHHHHHHHHHHHHHHH-----------cCccccCCCCccchhhhhhhhhhheee Confidence 4568999999999999999999999998888775 22 2223333333333 Q ss_pred --eeccCC Q lcl|NC_011703. 143 --FENDNH 148 (183) Q Consensus 143 --f~~D~~ 148 (183) ++.+.+ T Consensus 128 G~~Y~~e~ 135 (135) T protein:vir:95 128 GIFYKEEN 135 (135) T ss_pred eecccCCC Confidence 333333 No 14 >protein:vir:101303 Length: 135 # NCBI annotation: hypothetical protein # Family: family:all:508 # MgeID: mge:1591 # MgeName: phiNM3 # Cross-refs: genbank:acc:YP_908836;genbank:gi:118725100;genbank:GeneID:4555874 Probab=42.60 E-value=0.75 Score=21.28 Aligned_cols=115 Identities=17% Similarity=0.196 Sum_probs=64.3 Q ss_pred CchHHHHHHHHHHHH--HHHHhccccccCccceeeecccccccccCCCCeEEEEeccC-cccCCccceeeecccccceee Q lcl|NC_011703. 1 MFDGELIAKMVVELN--AAMASAQEALQFPDFEVVQKAQPTQQGTSTRPTIFFQKLFD-IPRGWPATDWYLDNTARKYVE 77 (183) Q Consensus 1 MtD~eL~~~i~~~l~--~~la~~g~~l~~~d~~V~q~~QPtqQG~~~~~~i~f~~i~~-~~~Gw~~r~y~~d~~~~~~~~ 77 (183) |-| ++..|...|. +.|++.= ..-.++--..| .-+-.+.|+|.+.|+.+ .|--|.+.++ +. T Consensus 1 m~d--iL~eIy~~L~~d~~L~~~v-----~~~rIk~~~~P-e~~d~~~p~IvI~pl~~p~p~~~~sn~~--------ls- 63 (135) T protein:vir:10 1 MID--ILYKVHEVISQDRIIREHV-----NINNIKFNKYP-NVKDTDVPFIVIDDIDDPIPTTYTDGDE--------CA- 63 (135) T ss_pred Ccc--hHHHHHHHhhcchHHHhhc-----CccceEEEecC-CccccccceEEEecCCCCCCccccCchh--------ce- Confidence 443 3333333332 2233221 00134444566 35556779999998876 3333333222 11 Q ss_pred eceeeeeeEEEEEEEeeeCCCcccccCHHHHHHHHHHHH-hhhHHHHHHHHcCcceeeeccccccc-------------- Q lcl|NC_011703. 78 ITRQHVETTFQISSLHWQNPEITHVVTASDIANYVRAYF-QARSTIERVKELDFLILRVSQISNEA-------------- 142 (183) Q Consensus 78 ~e~Qi~e~tyQi~~l~~~~p~~~~~~TAsDv~~~vr~i~-qS~~f~~~l~k~gvgi~Ra~~Ir~~~-------------- 142 (183) ++=.|||.+++.+..+...+++..||...++.+| .. +|..+.+.....| T Consensus 64 -----~~~~~QIDV~~k~~~~~~~R~~~~~i~~~I~~~l~~~-----------~~f~q~s~~ldeY~~et~~y~~aRRYr 127 (135) T protein:vir:10 64 -----YSYIVQIDVFVKYNDEYNARIIRNKISNRIQKLLWSE-----------LKMGNVSNGKPEYIEEFKTYRSSRVYE 127 (135) T ss_pred -----eeeeEEEeeeeecccccchhhHHHHHHHHHHHHHHHH-----------cCccccCCCCccchhhhhhhhhhheee Confidence 4568999999999999999999999998888775 22 2223333333333 Q ss_pred --eeccCC Q lcl|NC_011703. 143 --FENDNH 148 (183) Q Consensus 143 --f~~D~~ 148 (183) ++.+.+ T Consensus 128 G~~Y~~e~ 135 (135) T protein:vir:10 128 GIFYKEEN 135 (135) T ss_pred eecccCCC Confidence 333333 No 15 >protein:vir:100675 Length: 135 # NCBI annotation: 77ORF027 # Family: family:all:508 # MgeID: mge:1476 # MgeName: 77 # Cross-refs: genbank:acc:NP_958611;genbank:gi:41189540;genbank:GeneID:2743821 Probab=42.60 E-value=0.75 Score=21.28 Aligned_cols=115 Identities=17% Similarity=0.196 Sum_probs=64.3 Q ss_pred CchHHHHHHHHHHHH--HHHHhccccccCccceeeecccccccccCCCCeEEEEeccC-cccCCccceeeecccccceee Q lcl|NC_011703. 1 MFDGELIAKMVVELN--AAMASAQEALQFPDFEVVQKAQPTQQGTSTRPTIFFQKLFD-IPRGWPATDWYLDNTARKYVE 77 (183) Q Consensus 1 MtD~eL~~~i~~~l~--~~la~~g~~l~~~d~~V~q~~QPtqQG~~~~~~i~f~~i~~-~~~Gw~~r~y~~d~~~~~~~~ 77 (183) |-| ++..|...|. +.|++.= ..-.++--..| .-+-.+.|+|.+.|+.+ .|--|.+.++ +. T Consensus 1 m~d--iL~eIy~~L~~d~~L~~~v-----~~~rIk~~~~P-e~~d~~~p~IvI~pl~~p~p~~~~sn~~--------ls- 63 (135) T protein:vir:10 1 MID--ILYKVHEVISQDRIIREHV-----NINNIKFNKYP-NVKDTDVPFIVIDDIDDPIPTTYTDGDE--------CA- 63 (135) T ss_pred Ccc--hHHHHHHHhhcchHHHhhc-----CccceEEEecC-CccccccceEEEecCCCCCCccccCchh--------ce- Confidence 443 3333333332 2233221 00134444566 35556779999998876 3333333222 11 Q ss_pred eceeeeeeEEEEEEEeeeCCCcccccCHHHHHHHHHHHH-hhhHHHHHHHHcCcceeeeccccccc-------------- Q lcl|NC_011703. 78 ITRQHVETTFQISSLHWQNPEITHVVTASDIANYVRAYF-QARSTIERVKELDFLILRVSQISNEA-------------- 142 (183) Q Consensus 78 ~e~Qi~e~tyQi~~l~~~~p~~~~~~TAsDv~~~vr~i~-qS~~f~~~l~k~gvgi~Ra~~Ir~~~-------------- 142 (183) ++=.|||.+++.+..+...+++..||...++.+| .. +|..+.+.....| T Consensus 64 -----~~~~~QIDV~~k~~~~~~~R~~~~~i~~~I~~~l~~~-----------~~f~q~s~~ldeY~~et~~y~~aRRYr 127 (135) T protein:vir:10 64 -----YSYIVQIDVFVKYNDEYNARIIRNKISNRIQKLLWSE-----------LKMGNVSNGKPEYIEEFKTYRSSRVYE 127 (135) T ss_pred -----eeeeEEEeeeeecccccchhhHHHHHHHHHHHHHHHH-----------cCccccCCCCccchhhhhhhhhhheee Confidence 4568999999999999999999999998888775 22 2223333333333 Q ss_pred --eeccCC Q lcl|NC_011703. 143 --FENDNH 148 (183) Q Consensus 143 --f~~D~~ 148 (183) ++.+.+ T Consensus 128 G~~Y~~e~ 135 (135) T protein:vir:10 128 GIFYKEEN 135 (135) T ss_pred eecccCCC Confidence 333333 No 16 >protein:vir:80105 Length: 162 # NCBI annotation: gp13 # Family: family:all:2729 # MgeID: mge:1876 # MgeName: B054 # Cross-refs: genbank:acc:YP_001468717;genbank:gi:157325297;genbank:GeneID:5601796 Probab=28.67 E-value=1.7 Score=19.28 Aligned_cols=153 Identities=10% Similarity=0.057 Sum_probs=96.6 Q ss_pred CchHHHHHHHHHHHHHHHHhccccccCccceeeecccccccccCCCCeEEEEeccCcccCCccceeeecccccceeeece Q lcl|NC_011703. 1 MFDGELIAKMVVELNAAMASAQEALQFPDFEVVQKAQPTQQGTSTRPTIFFQKLFDIPRGWPATDWYLDNTARKYVEITR 80 (183) Q Consensus 1 MtD~eL~~~i~~~l~~~la~~g~~l~~~d~~V~q~~QPtqQG~~~~~~i~f~~i~~~~~Gw~~r~y~~d~~~~~~~~~e~ 80 (183) -.|.+|. ...|+..|.+.-..+ -|+-.+|- .-.|+=|++=+.-+- ..||. +.+ .++. T Consensus 7 ~~~~~~l---v~~ii~~i~~~~~gl-----~vI~~~~~--g~~p~yPF~TY~v~~---pyi~~--------~~~--~~~~ 63 (162) T protein:vir:80 7 GYDYGKL---VKTLINAVNELSGGL-----QLIESSSG--GEQPEYPFCQYTITS---PYIAI--------SPD--IVEG 63 (162) T ss_pred cccHHHH---HHHHHHHHHhhhcce-----eEEEccCC--CCCCCCCeEEEEEec---Ccccc--------CCc--ccCC Confidence 3455443 222333332222122 24433333 445677766442221 12222 122 2345 Q ss_pred eeeeeEEEEEEEeeeCCCcccccCHHHHHHHHHHHHhhhHHHHHHHHc-CcceeeeccccccceeccCCCcccCceeeEE Q lcl|NC_011703. 81 QHVETTFQISSLHWQNPEITHVVTASDIANYVRAYFQARSTIERVKEL-DFLILRVSQISNEAFENDNHQFEFHPSFDMV 159 (183) Q Consensus 81 Qi~e~tyQi~~l~~~~p~~~~~~TAsDv~~~vr~i~qS~~f~~~l~k~-gvgi~Ra~~Ir~~~f~~D~~~fe~~PsFd~~ 159 (183) .=++.+.||.+ ++++.. -|=++++-+|..+.+.+....++++ ||-+.-++++-+-.+.... +||.+=.||+. T Consensus 64 e~~~~~isi~~-~S~~~~-----eAl~la~~l~~~f~~~~~~~~~~~~~gIvvvdv~~~~~R~~~~~~-~yerR~GFD~~ 136 (162) T protein:vir:80 64 EQFEIVISLTW-RALSGH-----QALNLANITNKYFRSQKGRFFMQENGGIVVVSVQNSGLRDTFISI-EYERSAGIDLR 136 (162) T ss_pred cceEEEEEEEE-EeCCHH-----HHHHHHHHHHHHhhcCCceeeeeecCcEEEEecCCCccceeEeee-eeeeeecceEE Confidence 56788889888 555443 4778888888888887776666554 8889999999877766554 46999999999 Q ss_pred EEeeeEEeeccchhhhcceeeecC Q lcl|NC_011703. 160 VTYNQYIRLYENAAYSADGVLIGI 183 (183) Q Consensus 160 vTh~~~i~~~t~aV~~~d~v~~g~ 183 (183) +...|++.-+.+-.++++.-.-++ T Consensus 137 ~Rv~r~~e~~~~tIe~i~~~~~~~ 160 (162) T protein:vir:80 137 LRVVDSYSSEIQEIDNISFTNENL 160 (162) T ss_pred EEEeeccccccceeeeecccCccc Confidence 999999999999888887666666 Done!