Query lcl|NC_010275.1_cdsid_YP_001650892.1 [gene=kp27] [protein=hypothetical protein KP27] [protein_id=YP_001650892.1] [location=18338..18826] Match_columns 162 No_of_seqs 101 out of 119 Neff 5.8 Searched_HMMs 1612 Date Thu Nov 7 12:43:28 2013 Command /home/guerois/workspace/virfam/python/lib/hhsearch//hhsearch2 -i .//seq/seq_27 -d /home/guerois/workspace/virfam/python/profile_database/capsid_neck_tail.hhm -glob -cpu 7 -o .//seq/HHR/seq_27_vs_rec_db.hhr No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM 1 protein:vir:273 Length: 162 # 100.0 3.5E-71 2.2E-74 406.8 20.3 162 1-162 1-162 (162) 2 protein:vir:3749 Length: 166 # 100.0 5.6E-62 3.5E-65 356.4 19.8 160 1-162 1-161 (166) 3 protein:vir:3786 Length: 161 # 100.0 8.7E-62 5.4E-65 355.3 19.9 160 1-162 1-161 (161) 4 protein:vir:78779 Length: 174 100.0 5.3E-62 3.3E-65 356.5 18.7 160 1-162 7-167 (174) 5 protein:vir:98859 Length: 170 100.0 9.1E-61 5.7E-64 349.7 18.9 157 4-162 1-161 (170) 6 protein:vir:79169 Length: 138 100.0 4.7E-42 2.9E-45 247.1 16.2 135 6-150 1-138 (138) 7 protein:vir:1163 Length: 178 # 100.0 2E-40 1.3E-43 238.2 16.4 147 6-162 1-163 (178) 8 protein:vir:100311 Length: 161 100.0 2.2E-39 1.4E-42 232.5 17.1 146 6-162 1-161 (161) 9 protein:vir:5702 Length: 155 # 100.0 1.6E-39 1E-42 233.2 15.5 141 6-154 1-155 (155) 10 protein:vir:98561 Length: 158 100.0 1.8E-39 1.1E-42 233.0 15.5 144 3-154 1-158 (158) 11 protein:vir:6070 Length: 155 # 100.0 2.4E-39 1.5E-42 232.3 15.5 147 6-162 1-155 (155) 12 protein:vir:2025 Length: 155 # 100.0 2.6E-39 1.6E-42 232.1 15.5 147 6-162 1-155 (155) 13 protein:vir:1837 Length: 155 # 100.0 3E-39 1.9E-42 231.8 15.5 147 6-162 1-155 (155) 14 protein:vir:79131 Length: 144 100.0 1.3E-38 8E-42 228.3 15.6 135 6-151 1-144 (144) 15 protein:vir:4461 Length: 186 # 26.8 1.9 0.0012 19.0 9.4 97 1-121 76-186 (186) No 1 >protein:vir:273 Length: 162 # NCBI annotation: hypothetical protein # Family: family:all:706 # MgeID: mge:7 # MgeName: K139 # Cross-refs: genbank:acc:NP_536653;genbank:gi:17975131;genbank:GeneID:929087 Probab=100.00 E-value=3.5e-71 Score=406.83 Aligned_cols=162 Identities=100% Similarity=1.513 Sum_probs=160.5 Q ss_pred CcccccccHHHHHHHHHHhcCccccceeeEEEecCEEEEcCCCcCCeeEEEEEEeeEEEEEEeCCCCccCHHHHHHHHHH Q lcl|NC_010275. 1 MSYRVGYKMQALKAHIEMCVGKHIAQRLDAEMGNIELILTPRHMGNGIEICQQRYLAEFQIDRLPFKKYDPAVLFANVAA 80 (162) Q Consensus 1 ~~~~~~~Kl~sL~~~L~~~lp~~~~~~l~~~~d~G~li~~~~~~g~g~~~~~~~Y~a~l~i~~fp~~~~dp~~L~a~v~~ 80 (162) ||||||||||+||+||++++|+|++++|+||||+|+|+|++|++|+||++|.++|+|+|+|+|||||++||+.|||+|++ T Consensus 1 ~~~~~~skLq~Lt~~l~~~l~~~~~~~fdsw~e~g~l~~~~kd~g~G~~i~~~~Y~Avi~~erfP~r~~dP~~L~A~v~~ 80 (162) T protein:vir:27 1 MSYRVGYKMQALKAHIEMCVGKHIAQRLDAEMGNIELILTPRHMGNGIEICQQRYLAEFQIDRLPFKKYDPAVLFANVAA 80 (162) T ss_pred CccchhhHHHHHHHHHHHhcCcccccceeEEEEccEEEECCCCccCceEEEEEEEEEEEEeccCCCcccCHHHHHHHHHH Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred HHhhcchhhhcccccCCCceEEEEEcCCCeEEEEEEEeeeeeEEEEECCCCceeeCCEEEecccccceeeeEEEEEeecc Q lcl|NC_010275. 81 WLMDNDADREDQLGELKDPVIDVVVEDEDSAEVLIQVNFEEPIKLVEAESGLIYWQNKRWNIEEYPVWVAENLLDVVANV 160 (162) Q Consensus 81 WL~~nqpdl~~~~~~~~~p~fdvdi~d~~taDv~I~l~l~E~v~v~~d~~G~i~~~Gkrw~l~~~~iw~Ae~~~~~~~~~ 160 (162) ||.+||++|.++++++++|+|++|++|++||||.|+|+|+|+|.+++|++|+|+|+||||||++++||+||+++++++++ T Consensus 81 WL~e~d~~r~~~~~~l~~P~~dvei~D~~tAdv~i~i~l~E~i~lveD~~G~i~~~Gkry~l~~~eIw~Ae~~~~~~~~~ 160 (162) T protein:vir:27 81 WLMDNDADREDQLGELKDPVIDVVVEDEDSAEVLIQVNFEEPIKLVEAESGLIYWQNKRWNIEEYPVWVAENLLDVVANV 160 (162) T ss_pred HHhcccchhhhcccCCCCceEEEEEcCCCeeEEEEEEeeeeeEEEEeCCCCceeeCCeEEecccccceeeeeEEEEEeec Confidence 99999999998878999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred cC Q lcl|NC_010275. 161 RD 162 (162) Q Consensus 161 ~~ 162 (162) || T Consensus 161 ~~ 162 (162) T protein:vir:27 161 RD 162 (162) T ss_pred cC Confidence 99 No 2 >protein:vir:3749 Length: 166 # NCBI annotation: orf15 # Family: family:all:706 # MgeID: mge:79 # MgeName: HP1 # Cross-refs: genbank:acc:NP_043490;genbank:gi:9628625;genbank:GeneID:1261108 Probab=100.00 E-value=5.6e-62 Score=356.37 Aligned_cols=160 Identities=24% Similarity=0.427 Sum_probs=155.4 Q ss_pred CcccccccHHHHHHHHHHhcCccccceeeEEEecCEEEEcCCCcC-CeeEEEEEEeeEEEEEEeCCCCccCHHHHHHHHH Q lcl|NC_010275. 1 MSYRVGYKMQALKAHIEMCVGKHIAQRLDAEMGNIELILTPRHMG-NGIEICQQRYLAEFQIDRLPFKKYDPAVLFANVA 79 (162) Q Consensus 1 ~~~~~~~Kl~sL~~~L~~~lp~~~~~~l~~~~d~G~li~~~~~~g-~g~~~~~~~Y~a~l~i~~fp~~~~dp~~L~a~v~ 79 (162) ||-=+|||||+||+||++++|++++++|+||||+|+|+|++|++| +||++|+++|+|+|+|+|||||++||+.|||+|. T Consensus 1 ~~~~~~skLq~Lt~~l~~~lp~~~~~~fdswme~~~l~~~~k~~g~~g~~i~~~~Y~Avi~~erfP~r~~dP~~L~A~v~ 80 (166) T protein:vir:37 1 MATVKKMLYQQLTAFLLTKLPKRYHGNFYSWIEDGKLLNEGRQVTENGIEVCHLSYNGVFHFEALPFNEISPAYLMAHIQ 80 (166) T ss_pred CcchhHHHHHHHHHHHHHhcCcccCceeEEEEeccEEEEccccCCCCcEEEEEEEEEEEEEeccCCCccCCHHHHHHHHH Confidence 999999999999999999999999999999999999999999999 5899999999999999999999999999999999 Q ss_pred HHHhhcchhhhcccccCCCceEEEEEcCCCeEEEEEEEeeeeeEEEEECCCCceeeCCEEEecccccceeeeEEEEEeec Q lcl|NC_010275. 80 AWLMDNDADREDQLGELKDPVIDVVVEDEDSAEVLIQVNFEEPIKLVEAESGLIYWQNKRWNIEEYPVWVAENLLDVVAN 159 (162) Q Consensus 80 ~WL~~nqpdl~~~~~~~~~p~fdvdi~d~~taDv~I~l~l~E~v~v~~d~~G~i~~~Gkrw~l~~~~iw~Ae~~~~~~~~ 159 (162) +||.+|+++|.+. ++++|+|+++++|++||||.|+|+|+|+|.+++|++|+|+|+||||||++++||+||++++++++ T Consensus 81 ~WL~e~D~~r~~~--~l~~P~~dvei~D~~tAdv~i~i~f~E~i~lveD~~G~i~~~Gkry~l~~~eIw~Ae~~~i~~~~ 158 (166) T protein:vir:37 81 VWVNENDPMRDVL--DESEIPFDLDIIDDNTTDLIFTIAFREPLTAMEDNEGELKIDGVNYRLDEIEVFTAEEIDVVVRV 158 (166) T ss_pred HHHHhcCCccccc--CCcCCceEEEEcCCCeEEEEEEEeeeceEEEEeCCCCceeeCCeEEeccCccceeeeeEEEEecC Confidence 9999999999753 67899999999999999999999999999999999999999999999999999999999999998 Q ss_pred ccC Q lcl|NC_010275. 160 VRD 162 (162) Q Consensus 160 ~~~ 162 (162) -+. T Consensus 159 ~~~ 161 (166) T protein:vir:37 159 EHE 161 (166) T ss_pred Ccc Confidence 888 No 3 >protein:vir:3786 Length: 161 # NCBI annotation: orf21 # Family: family:all:706 # MgeID: mge:328 # MgeName: HP2 # Cross-refs: genbank:acc:NP_536826;genbank:gi:17981835;genbank:GeneID:929214 Probab=100.00 E-value=8.7e-62 Score=355.35 Aligned_cols=160 Identities=24% Similarity=0.414 Sum_probs=153.6 Q ss_pred CcccccccHHHHHHHHHHhcCccccceeeEEEecCEEEEcCCCcC-CeeEEEEEEeeEEEEEEeCCCCccCHHHHHHHHH Q lcl|NC_010275. 1 MSYRVGYKMQALKAHIEMCVGKHIAQRLDAEMGNIELILTPRHMG-NGIEICQQRYLAEFQIDRLPFKKYDPAVLFANVA 79 (162) Q Consensus 1 ~~~~~~~Kl~sL~~~L~~~lp~~~~~~l~~~~d~G~li~~~~~~g-~g~~~~~~~Y~a~l~i~~fp~~~~dp~~L~a~v~ 79 (162) |+-=+|+|||+||+||++++|++++++|+||||||+|+|++|++| +||++|+++|+|+|+|+|||||++||+.|||+|+ T Consensus 1 ~~~~~~~kLq~Lt~~l~~~lp~~~~~~~dswme~~~l~~~~k~~g~~g~~~~~~~Y~Avi~~er~P~r~~dP~~L~A~v~ 80 (161) T protein:vir:37 1 MAAVKKMLYQQLTDFLLTKLPKRYHGNFYSWMENGKLVNQGKQVTNNGIEICHIQYDGILFFNEFPFKEISPAYLMALIQ 80 (161) T ss_pred CccchHHHHHHHHHHHHHhcCccccceeEEEEeccEEEEcccccCCCcEEEEEEEEEEEEEeccCCCccCCHHHHHHHHH Confidence 999999999999999999999999999999999999999999999 6899999999999999999999999999999999 Q ss_pred HHHhhcchhhhcccccCCCceEEEEEcCCCeEEEEEEEeeeeeEEEEECCCCceeeCCEEEecccccceeeeEEEEEeec Q lcl|NC_010275. 80 AWLMDNDADREDQLGELKDPVIDVVVEDEDSAEVLIQVNFEEPIKLVEAESGLIYWQNKRWNIEEYPVWVAENLLDVVAN 159 (162) Q Consensus 80 ~WL~~nqpdl~~~~~~~~~p~fdvdi~d~~taDv~I~l~l~E~v~v~~d~~G~i~~~Gkrw~l~~~~iw~Ae~~~~~~~~ 159 (162) +||.+||++|.+. ++++|+|+++++|+++|||.|+|+|+|+|.+++|++|+|+|+||||||++++||+||++++..++ T Consensus 81 ~WL~e~d~~r~~~--~l~~P~~dvei~D~~tAdv~i~i~f~E~i~lveD~~G~i~~~Gkry~l~~~eI~~Ae~~~i~~~~ 158 (161) T protein:vir:37 81 IWLNENDDMRDCL--DNYETPFDIEIINDDVADMSFTISFQEPLTAIEDKNGELDIDNKKYSLSTIDVWIAKEIELEAIV 158 (161) T ss_pred HHHhccCCcchhc--CCCCCceEEEEcCCCeEEEEEEEeeeceEEEEeCCCCceeeCCeEEeccCccceeeeeEEEEecc Confidence 9999999999753 68899999999999999999999999999999999999999999999999999999999977766 Q ss_pred ccC Q lcl|NC_010275. 160 VRD 162 (162) Q Consensus 160 ~~~ 162 (162) ..- T Consensus 159 ~~g 161 (161) T protein:vir:37 159 DAN 161 (161) T ss_pred CCC Confidence 555 No 4 >protein:vir:78779 Length: 174 # NCBI annotation: conserved hypothetical protein # Family: family:all:706 # MgeID: mge:1857 # MgeName: phiO18P # Cross-refs: genbank:acc:YP_001285650;genbank:gi:148727156;genbank:GeneID:5220128 Probab=100.00 E-value=5.3e-62 Score=356.52 Aligned_cols=160 Identities=38% Similarity=0.669 Sum_probs=153.9 Q ss_pred CcccccccHHHHHHHHHHhcCccccceeeEEEecCEEEEcCCCcC-CeeEEEEEEeeEEEEEEeCCCCccCHHHHHHHHH Q lcl|NC_010275. 1 MSYRVGYKMQALKAHIEMCVGKHIAQRLDAEMGNIELILTPRHMG-NGIEICQQRYLAEFQIDRLPFKKYDPAVLFANVA 79 (162) Q Consensus 1 ~~~~~~~Kl~sL~~~L~~~lp~~~~~~l~~~~d~G~li~~~~~~g-~g~~~~~~~Y~a~l~i~~fp~~~~dp~~L~a~v~ 79 (162) -|||.|+|||+||+||++++|++++++|+||||+|+|+|++|++| +||++|+++|+|+|+|+|||||++||+.|||+|. T Consensus 7 q~~~~~~KLq~LTa~l~~~lp~~~~~~fdswme~~~l~~~~k~~g~~g~~i~~~~Y~Avi~~erfP~r~~dP~~L~A~v~ 86 (174) T protein:vir:78 7 EQQAQGYFLHALHAELLRVLPAKCHKTLDSWMENGTIKLEPKNMGPTGVDVAWLTYQAVFTIEQLPFRELDPAILLAAVA 86 (174) T ss_pred HHHHHhhHHHHHHHHHHHhcCccccceeeEEEeccEEEECCcccCCCeEEEEEEEEEEEEEeccCCCcccCHHHHHHHHH Confidence 358899999999999999999999999999999999999999999 5899999999999999999999999999999999 Q ss_pred HHHhhcchhhhcccccCCCceEEEEEcCCCeEEEEEEEeeeeeEEEEECCCCceeeCCEEEecccccceeeeEEEEEeec Q lcl|NC_010275. 80 AWLMDNDADREDQLGELKDPVIDVVVEDEDSAEVLIQVNFEEPIKLVEAESGLIYWQNKRWNIEEYPVWVAENLLDVVAN 159 (162) Q Consensus 80 ~WL~~nqpdl~~~~~~~~~p~fdvdi~d~~taDv~I~l~l~E~v~v~~d~~G~i~~~Gkrw~l~~~~iw~Ae~~~~~~~~ 159 (162) +||.+|+++|.+. ++++|+|++|++|+++|||.|+|+|.|+|.+++|++|+|+|+||||||++++||+||++++++++ T Consensus 87 ~WL~e~D~~r~~~--~L~~P~~dvei~D~~tAdv~i~i~f~E~i~lveD~~G~i~~~Gkry~l~~~eI~~Ae~~ei~~~~ 164 (174) T protein:vir:78 87 AWVQEHDEVREQL--GLPDPEYAVTPNDEQTADLEIQLPFAEPLRLIEHPQGPINWLGKRWNVAPYDIWVAEQIDLNVGD 164 (174) T ss_pred HHHhhcCccchhc--CCCCCceEEEEcCCCeEEEEEEEeeecceEEEeCCCCCcccCCeEEeccCcceeeeeEEEEEecC Confidence 9999999999653 78899999999999999999999999999999999999999999999999999999999999988 Q ss_pred ccC Q lcl|NC_010275. 160 VRD 162 (162) Q Consensus 160 ~~~ 162 (162) -+. T Consensus 165 ~~~ 167 (174) T protein:vir:78 165 SGA 167 (174) T ss_pred CCc Confidence 888 No 5 >protein:vir:98859 Length: 170 # NCBI annotation: hypothetical protein # Family: family:all:706 # MgeID: mge:1495 # MgeName: F108 # Cross-refs: genbank:acc:YP_654735;genbank:gi:109302920;genbank:GeneID:4156064 Probab=100.00 E-value=9.1e-61 Score=349.74 Aligned_cols=157 Identities=20% Similarity=0.366 Sum_probs=149.0 Q ss_pred cccccHHHHHHHHHHhcCccccceeeEEEecCEEEEcCCCcCC-eeEEEEEEeeEEEEEEeCCCCccCHHHHHHHHHHHH Q lcl|NC_010275. 4 RVGYKMQALKAHIEMCVGKHIAQRLDAEMGNIELILTPRHMGN-GIEICQQRYLAEFQIDRLPFKKYDPAVLFANVAAWL 82 (162) Q Consensus 4 ~~~~Kl~sL~~~L~~~lp~~~~~~l~~~~d~G~li~~~~~~g~-g~~~~~~~Y~a~l~i~~fp~~~~dp~~L~a~v~~WL 82 (162) -+|+|||+||+||++++|++++++|+||||+|+|+|++|++|+ ||++|+++|+|+|+|+|||||++||+.|||+|++|| T Consensus 1 m~~skLq~LT~fl~~~lp~~~~~~fdswme~g~l~~~~k~~g~~g~~i~~~~Y~Avi~~erfP~r~~dP~~L~A~v~~WL 80 (170) T protein:vir:98 1 MKKMLYQQLTEFLLTKLPARYHAHFHAWIENGKLLNQGKRVTDAGIEIAHIQYDAVLFFDEFPFREISAQKIMADIQIWL 80 (170) T ss_pred CchhHHHHHHHHHHhhcCcccccceeEEEeccEEEECCccccCceEEEEEEEEEEEEEeccCCCcccCHHHHHHHHHHHH Confidence 5699999999999999999999999999999999999999997 899999999999999999999999999999999999 Q ss_pred hhcchhhhcccccCCCceEEEEEcCCCeEEEEEEEeeeeeEEEEECCCCceeeCCEEEecccccceeeeEEEEEe---ec Q lcl|NC_010275. 83 MDNDADREDQLGELKDPVIDVVVEDEDSAEVLIQVNFEEPIKLVEAESGLIYWQNKRWNIEEYPVWVAENLLDVV---AN 159 (162) Q Consensus 83 ~~nqpdl~~~~~~~~~p~fdvdi~d~~taDv~I~l~l~E~v~v~~d~~G~i~~~Gkrw~l~~~~iw~Ae~~~~~~---~~ 159 (162) .+|+++|.+. ++++|+|+++++|+++|||.|+|+|.|+|.+++|++|+|+|+||||||++++||+||++++++ -. T Consensus 81 ~e~D~~R~~~--~l~~P~~dvei~D~~tAdv~iti~f~E~i~lveD~~G~I~~~Gkrw~l~~~eI~~Ae~~evv~~~~~~ 158 (170) T protein:vir:98 81 NENDYLRDVL--DEYETPFELEIINDDVADLTFTISFQEPLTAVEDDAGDLEIDSKKYRLDEIEINIVNSIDLVYPAPKQ 158 (170) T ss_pred hccCCccccc--CCCCCceeeEEcCCCeEEEEEEEeeecceEEEeCCCCCcccCCeEEeecCccceeeeEEEEecCCccc Confidence 9999998653 788999999999999999999999999999999999999999999999999999999999997 23 Q ss_pred ccC Q lcl|NC_010275. 160 VRD 162 (162) Q Consensus 160 ~~~ 162 (162) ++| T Consensus 159 ~~~ 161 (170) T protein:vir:98 159 AKE 161 (170) T ss_pred ccc Confidence 333 No 6 >protein:vir:79169 Length: 138 # NCBI annotation: gp40, P2 phage tail completion protein R (GpR) # Family: family:all:386 # MgeID: mge:1866 # MgeName: phiE202 # Cross-refs: genbank:acc:YP_001111071;genbank:gi:134288754;genbank:GeneID:4960688 Probab=100.00 E-value=4.7e-42 Score=247.15 Aligned_cols=135 Identities=14% Similarity=0.147 Sum_probs=124.5 Q ss_pred cccHHHHHHHHHHhcCc--cccceeeEEEecCEEEEcCCCcCCeeEEEEEEeeEEEEEEeCCCCccCHHHHHHHHHHHHh Q lcl|NC_010275. 6 GYKMQALKAHIEMCVGK--HIAQRLDAEMGNIELILTPRHMGNGIEICQQRYLAEFQIDRLPFKKYDPAVLFANVAAWLM 83 (162) Q Consensus 6 ~~Kl~sL~~~L~~~lp~--~~~~~l~~~~d~G~li~~~~~~g~g~~~~~~~Y~a~l~i~~fp~~~~dp~~L~a~v~~WL~ 83 (162) =.||+|||++|++++|. ++|++|++|+++|+|++|++.. .+|+|+|+++|+++||++ ||+.||+||++||+ T Consensus 1 M~Kp~sLR~~L~~avp~L~~nPd~L~vfv~~G~i~~t~~~s----~Sfey~Ytl~i~i~df~g---~~d~l~vpil~Wl~ 73 (138) T protein:vir:79 1 MNKPSSLRAALVAALPQLNASPDQLLVFVNEGRIEATGTRT----ASFDYEYECEIIIRDFIG---NPDDVMIAVVEWAR 73 (138) T ss_pred CccHHHHHHHHHHhchHhhcCcceEEEEEecCEEEEecCCC----CceEEEEEEEEEEEecCC---CHHHHHHHHHHHHH Confidence 57999999999999995 7899999999999999998642 447899999999999999 99999999999999 Q ss_pred hcchhhhcccccCC-CceEEEEEcCCCeEEEEEEEeeeeeEEEEECCCCceeeCCEEEecccccceee Q lcl|NC_010275. 84 DNDADREDQLGELK-DPVIDVVVEDEDSAEVLIQVNFEEPIKLVEAESGLIYWQNKRWNIEEYPVWVA 150 (162) Q Consensus 84 ~nqpdl~~~~~~~~-~p~fdvdi~d~~taDv~I~l~l~E~v~v~~d~~G~i~~~Gkrw~l~~~~iw~A 150 (162) +||||++.|+++++ +++|++|++||++|||+|+|+|||||+|+++++|.+.. .+.-++++-|.| T Consensus 74 ~nQpDll~np~~r~~g~~Fe~dild~~~~Di~i~l~LTErv~v~~~~~G~~~v---~h~~Ep~~~~~~ 138 (138) T protein:vir:79 74 ANQPDLVTNRDERRNGMTFVADILSNNAVDLGLKVKLSESVVVGTDEAGNRTV---EHIDDAADEWLS 138 (138) T ss_pred hcCcccccChhHhccCcEEEEEEcCCCeeeEEEEeeeeEEEEEEECCCCeEEE---EecCCCCcccCC Confidence 99999999998875 59999999999999999999999999999999998775 566788999999 No 7 >protein:vir:1163 Length: 178 # NCBI annotation: predicted tail completion # Family: family:all:386 # MgeID: mge:24 # MgeName: phi CTX # Cross-refs: genbank:acc:NP_490612;genbank:gi:17313232;genbank:GeneID:927309 Probab=100.00 E-value=2e-40 Score=238.19 Aligned_cols=147 Identities=17% Similarity=0.151 Sum_probs=117.9 Q ss_pred cccHHHHHHHHHHhcCc--cccceeeEEEecCEEEEcCCCcCCeeEEEEEEeeEEEEEEeCCCCccCHHHHHHHHHHHHh Q lcl|NC_010275. 6 GYKMQALKAHIEMCVGK--HIAQRLDAEMGNIELILTPRHMGNGIEICQQRYLAEFQIDRLPFKKYDPAVLFANVAAWLM 83 (162) Q Consensus 6 ~~Kl~sL~~~L~~~lp~--~~~~~l~~~~d~G~li~~~~~~g~g~~~~~~~Y~a~l~i~~fp~~~~dp~~L~a~v~~WL~ 83 (162) =.||+|||++|++++|. ++|++|++|+++|+|++|++. + .+|+|+|+++|+++||++ ||+.||+||++||+ T Consensus 1 M~Kp~sLR~~L~~avP~L~~nPd~L~vfvd~G~i~at~a~-s---lSfey~Ytl~i~i~Df~g---d~d~L~vpil~WLr 73 (178) T protein:vir:11 1 MNKPDSLKAHLLAAVPELRNNGDRLVIFIDNGRVRSTSAE-S---LSFEYAYDLQVILTDFAG---HPDSVFLPLLGWLL 73 (178) T ss_pred CchHHHHHHHHHHhhhHhhcCcceEEEEEecCEEEecCCC-C---CceEEEEEEEEEEeecCC---CHHHHHHHHHHHHH Confidence 57999999999999995 789999999999999999764 2 347899999999999999 99999999999999 Q ss_pred hcchhhhcccccCC-CceEEEEEcCCCeEEEEEEEeeeeeEEEEECCCCceeeCCEEEeccccccee-----e----eEE Q lcl|NC_010275. 84 DNDADREDQLGELK-DPVIDVVVEDEDSAEVLIQVNFEEPIKLVEAESGLIYWQNKRWNIEEYPVWV-----A----ENL 153 (162) Q Consensus 84 ~nqpdl~~~~~~~~-~p~fdvdi~d~~taDv~I~l~l~E~v~v~~d~~G~i~~~Gkrw~l~~~~iw~-----A----e~~ 153 (162) +||||++.|+++++ +++|++|++||++|||+|+|+|||||+|+++++|.+... +.-++..-+. . .++ T Consensus 74 ~nQPDll~npd~r~~gi~Feadildn~~~Di~I~l~LTErV~V~~~~~G~~~v~---h~~EP~~p~~~~~~~~~~l~~~g 150 (178) T protein:vir:11 74 VNQSDLLANLTKVQDGITFEADMLDRSKVDLGIVLQLTERVVVKRREDGRYDVS---HPEEPQLTEAIEVDGPMQMLANG 150 (178) T ss_pred hcCcccccChhhhccCceEEEEEcCCCeEeEEEEeeeeeEEEEEECCCCeEEEE---ecCCCCCCCCCCCCccceeeecC Confidence 99999999998775 599999999999999999999999999999999977543 2222211110 0 011 Q ss_pred EEEe----ecccC Q lcl|NC_010275. 154 LDVV----ANVRD 162 (162) Q Consensus 154 ~~~~----~~~~~ 162 (162) +++. +...| T Consensus 151 el~a~w~~~~~~~ 163 (178) T protein:vir:11 151 ELLAEWTPPKPTE 163 (178) T ss_pred cEeeeecCCCCcc Confidence 1110 11111 No 8 >protein:vir:100311 Length: 161 # NCBI annotation: tail completion protein R # Family: family:all:386 # MgeID: mge:1484 # MgeName: phi-MhaA1-PHL101 # Cross-refs: genbank:acc:YP_655480;genbank:gi:109289948;genbank:GeneID:4157354 Probab=100.00 E-value=2.2e-39 Score=232.50 Aligned_cols=146 Identities=12% Similarity=0.151 Sum_probs=117.8 Q ss_pred cccHHHHHHHHHHhcCc--cccceeeEEEecCEEEEcCCCcCCeeEEEEEEeeEEEEEEeCCCCccCHHHHHHHHHHHHh Q lcl|NC_010275. 6 GYKMQALKAHIEMCVGK--HIAQRLDAEMGNIELILTPRHMGNGIEICQQRYLAEFQIDRLPFKKYDPAVLFANVAAWLM 83 (162) Q Consensus 6 ~~Kl~sL~~~L~~~lp~--~~~~~l~~~~d~G~li~~~~~~g~g~~~~~~~Y~a~l~i~~fp~~~~dp~~L~a~v~~WL~ 83 (162) =.||+|||++|++++|. ++|++|++|+++|+|++|+.. + .+|+|+|+++|+++||++ ||+.||+||++||+ T Consensus 1 M~Kp~sLR~~L~~avp~L~~nPd~L~vfv~~G~i~at~~~-s---lSfey~Ytl~i~i~Df~g---d~d~L~vpil~Wl~ 73 (161) T protein:vir:10 1 MIKPDRLRAVLTQTIDIFQANPEKLILQYDKGKIKSKGSQ-S---HSFEYHYDLELIVVDFPY---HPDVLFVPVLNFVR 73 (161) T ss_pred CccHHHHHHHHHHhhhHhhcCcceEEEEEecCEEEEecCC-C---CCeEEEEEEEEEEEecCC---CHHHHHHHHHHHHH Confidence 57999999999999995 789999999999999999754 2 347799999999999999 99999999999999 Q ss_pred hcchhhhcccccCCCceEEEEEcCCCeEEEEEEEeeeeeEEEEECCCCceeeCCEEEeccc-----ccceeeeEEEEEee Q lcl|NC_010275. 84 DNDADREDQLGELKDPVIDVVVEDEDSAEVLIQVNFEEPIKLVEAESGLIYWQNKRWNIEE-----YPVWVAENLLDVVA 158 (162) Q Consensus 84 ~nqpdl~~~~~~~~~p~fdvdi~d~~taDv~I~l~l~E~v~v~~d~~G~i~~~Gkrw~l~~-----~~iw~Ae~~~~~~~ 158 (162) +||||++.|++++++++|++|++||++|||+|+|+|||||+|+ +++|.+... +.-++ .+.+....-++... T Consensus 74 ~nQpDll~np~~r~~~~Feadildn~~~Di~i~l~LTErviV~-~~~g~~~v~---h~~Ep~~~~~~p~~~~~~~~l~~~ 149 (161) T protein:vir:10 74 NEQWELLQNPELQDKIEFEIDHNNHESYDIYIRLPLTERVIVK-EQDGHLTAT---HADEPNLADVSPFTRLTEYEVYLK 149 (161) T ss_pred hcCchhhcCccccCCceEEEEEcCCCeEeEEEEeeeeEEEEEE-ecCCeEEEE---ecCCCCCCCCCCCCCCCceEEEEc Confidence 9999999998888889999999999999999999999999886 557877653 22221 12233222222221 Q ss_pred c--------ccC Q lcl|NC_010275. 159 N--------VRD 162 (162) Q Consensus 159 ~--------~~~ 162 (162) + -+| T Consensus 150 ge~i~~w~~~~~ 161 (161) T protein:vir:10 150 DELIYQWAEPNE 161 (161) T ss_pred CeEEEEecCCCC Confidence 1 122 No 9 >protein:vir:5702 Length: 155 # NCBI annotation: gpR # Family: family:all:386 # MgeID: mge:120 # MgeName: L-413C # Cross-refs: genbank:acc:NP_839861;genbank:gi:30065716;genbank:GeneID:1260610 Probab=100.00 E-value=1.6e-39 Score=233.24 Aligned_cols=141 Identities=17% Similarity=0.126 Sum_probs=116.3 Q ss_pred cccHHHHHHHHHHhcCc--cccceeeEEEecCEEEEcCCCcCCeeEEEEEEeeEEEEEEeCCCCccCHHHHHHHHHHHHh Q lcl|NC_010275. 6 GYKMQALKAHIEMCVGK--HIAQRLDAEMGNIELILTPRHMGNGIEICQQRYLAEFQIDRLPFKKYDPAVLFANVAAWLM 83 (162) Q Consensus 6 ~~Kl~sL~~~L~~~lp~--~~~~~l~~~~d~G~li~~~~~~g~g~~~~~~~Y~a~l~i~~fp~~~~dp~~L~a~v~~WL~ 83 (162) =.||+|||++|++++|. ++|++|++|+++|+|++|+... .+|+|+|+++|+++||++ ||+.||+||++||+ T Consensus 1 M~Kp~sLR~~L~~avp~L~~nPd~L~vfv~~G~i~~T~a~s----lSfey~Ytl~i~i~Df~g---~~d~L~vpil~Wlr 73 (155) T protein:vir:57 1 MLKPDSLRRALTDAVTVLKTNPDMLRIFVDNGSIASTLATS----LSFEKRYTLNVIVTDFTG---DFDLLIVPVLAWLR 73 (155) T ss_pred CccHHHHHHHHHHhhhHhhcCcccEEEEEecCEEEEccCCC----CCeEEEEEEEEEEEecCC---CHHHHHHHHHHHHH Confidence 57999999999999995 7899999999999999997532 347899999999999999 99999999999999 Q ss_pred hcchhhhcccccCC-CceEEEEEcCCCeEEEEEEEeeeeeEEEEECCCCceeeCC-----------EEEecccccceeee Q lcl|NC_010275. 84 DNDADREDQLGELK-DPVIDVVVEDEDSAEVLIQVNFEEPIKLVEAESGLIYWQN-----------KRWNIEEYPVWVAE 151 (162) Q Consensus 84 ~nqpdl~~~~~~~~-~p~fdvdi~d~~taDv~I~l~l~E~v~v~~d~~G~i~~~G-----------krw~l~~~~iw~Ae 151 (162) +||||++.|+++++ +++|++|++||++|||+|+|+|||||+|+++ +|.+...- ..|.+.--.-++|| T Consensus 74 ~~QPDll~np~~r~~g~~Feadildn~~~Di~i~l~LTErviV~~~-~g~~~v~h~~EP~~p~~~~~~~~l~~~ge~~~~ 152 (155) T protein:vir:57 74 ENQPDIMTTDAGQKKGFTFYADINNDSSFDISISLMLTERTLVSEV-DGALHVKNIPEPPPPEPVTRPMELYINGELVSK 152 (155) T ss_pred hcCcccccChhHhccCcEEEEEEcCCCeEeEEEEeeeeEEEEEEec-CCeEEEEecCCCCCCCCCCCceEEEEcCcEEEe Confidence 99999999988776 5999999999999999999999999999975 67664311 02333333333333 Q ss_pred EEE Q lcl|NC_010275. 152 NLL 154 (162) Q Consensus 152 ~~~ 154 (162) =-+ T Consensus 153 w~e 155 (155) T protein:vir:57 153 WDE 155 (155) T ss_pred ecC Confidence 222 No 10 >protein:vir:98561 Length: 158 # NCBI annotation: gp13 # Family: family:all:386 # MgeID: mge:1533 # MgeName: PSP3 # Cross-refs: genbank:acc:NP_958068;genbank:gi:41057365;genbank:GeneID:2744232 Probab=100.00 E-value=1.8e-39 Score=233.00 Aligned_cols=144 Identities=14% Similarity=0.097 Sum_probs=117.8 Q ss_pred ccccccHHHHHHHHHHhcCc--cccceeeEEEecCEEEEcCCCcCCeeEEEEEEeeEEEEEEeCCCCccCHHHHHHHHHH Q lcl|NC_010275. 3 YRVGYKMQALKAHIEMCVGK--HIAQRLDAEMGNIELILTPRHMGNGIEICQQRYLAEFQIDRLPFKKYDPAVLFANVAA 80 (162) Q Consensus 3 ~~~~~Kl~sL~~~L~~~lp~--~~~~~l~~~~d~G~li~~~~~~g~g~~~~~~~Y~a~l~i~~fp~~~~dp~~L~a~v~~ 80 (162) .-+=.||+|||++|++++|. ++|++|++|+++|+|++|+... .+|+|+|+++|+++||++ ||+.||+||++ T Consensus 1 ~~~M~Kp~sLR~~L~~avp~L~~nPd~L~vfv~~G~i~aT~a~s----lSfey~Ytl~i~i~Df~g---~~d~L~vpil~ 73 (158) T protein:vir:98 1 MNSMQKHKSLRKALINAVPQLRNNPDMLRLFADNGHTDSRLESS----LSFEKVYVLNVVVTDFTG---DLDLIFVPVQA 73 (158) T ss_pred CchhhhHHHHHHHHHHhhhHhhcCcceEEEEEecCEEEEccCCC----CceEEEEEEEEEEEecCC---CHHHHHHHHHH Confidence 34668999999999999996 7899999999999999997642 457899999999999999 99999999999 Q ss_pred HHhhcchhhhcccccCC-CceEEEEEcCCCeEEEEEEEeeeeeEEEEECCCCceeeCC-----------EEEecccccce Q lcl|NC_010275. 81 WLMDNDADREDQLGELK-DPVIDVVVEDEDSAEVLIQVNFEEPIKLVEAESGLIYWQN-----------KRWNIEEYPVW 148 (162) Q Consensus 81 WL~~nqpdl~~~~~~~~-~p~fdvdi~d~~taDv~I~l~l~E~v~v~~d~~G~i~~~G-----------krw~l~~~~iw 148 (162) ||++||||++.|+++++ +++|++|++||+++||+|+|+|||||+|+++ +|.+...- ..|.+.--.-+ T Consensus 74 Wlr~~QPDll~np~~r~~gi~Feadildn~~~Di~I~l~LTErViV~~~-~g~~~v~h~~EP~~p~~~~~~~~l~~~ge~ 152 (158) T protein:vir:98 74 WLREHQPDIMTTDDGREKGFTWMIDINNDDSLDISISLRLTERTLVKEV-DGALHVSYAPEPPLPEPVTRPVELYVNGEL 152 (158) T ss_pred HHHhcCcccccChhHhccCcEEEEEEcCCCeEeEEEEeeeeEEEEEEec-CCeEEEEecCCCCCCCCCCCceeEEEcCcE Confidence 99999999999998776 5999999999999999999999999999755 67664321 12333322223 Q ss_pred eeeEEE Q lcl|NC_010275. 149 VAENLL 154 (162) Q Consensus 149 ~Ae~~~ 154 (162) +||=.+ T Consensus 153 i~~w~e 158 (158) T protein:vir:98 153 VSKWDE 158 (158) T ss_pred EEeecC Confidence 333222 No 11 >protein:vir:6070 Length: 155 # NCBI annotation: gpR # Family: family:all:386 # MgeID: mge:126 # MgeName: WPhi # Cross-refs: genbank:acc:NP_878211;genbank:gi:33438910;genbank:GeneID:1457745 Probab=100.00 E-value=2.4e-39 Score=232.32 Aligned_cols=147 Identities=18% Similarity=0.131 Sum_probs=117.4 Q ss_pred cccHHHHHHHHHHhcCc--cccceeeEEEecCEEEEcCCCcCCeeEEEEEEeeEEEEEEeCCCCccCHHHHHHHHHHHHh Q lcl|NC_010275. 6 GYKMQALKAHIEMCVGK--HIAQRLDAEMGNIELILTPRHMGNGIEICQQRYLAEFQIDRLPFKKYDPAVLFANVAAWLM 83 (162) Q Consensus 6 ~~Kl~sL~~~L~~~lp~--~~~~~l~~~~d~G~li~~~~~~g~g~~~~~~~Y~a~l~i~~fp~~~~dp~~L~a~v~~WL~ 83 (162) =.||+|||++|++++|. ++|++|++|+++|+|++|+... .+|+|+|+++|+++||++ ||+.||+||++||+ T Consensus 1 M~Kp~sLR~~L~~avp~L~~nPd~L~vfv~~G~i~~t~a~s----lSfey~Ytl~i~i~Df~g---~~d~L~vpil~Wlr 73 (155) T protein:vir:60 1 MLKPDSLRRALTDAVTVLKTSPEMLRIFVDNGSIASTLATS----LSFEKRYTLNVIVTDFTG---DFDLLIVPVLAWLR 73 (155) T ss_pred CccHHHHHHHHHHhhhHhhcCcceEEEEEecCEEEEccCCC----CCeEEEEEEEEEEEecCC---CHHHHHHHHHHHHH Confidence 57999999999999995 7899999999999999997532 347899999999999999 99999999999999 Q ss_pred hcchhhhcccccCC-CceEEEEEcCCCeEEEEEEEeeeeeEEEEECCCCceeeCCEEEecccccceeeeEEEEE-----e Q lcl|NC_010275. 84 DNDADREDQLGELK-DPVIDVVVEDEDSAEVLIQVNFEEPIKLVEAESGLIYWQNKRWNIEEYPVWVAENLLDV-----V 157 (162) Q Consensus 84 ~nqpdl~~~~~~~~-~p~fdvdi~d~~taDv~I~l~l~E~v~v~~d~~G~i~~~Gkrw~l~~~~iw~Ae~~~~~-----~ 157 (162) +||||++.|+++++ +++|++|++||++|||+|+|+|||||+|+++ +|.+.....-....+.++- ..-++. + T Consensus 74 ~~QPDll~np~~r~~g~~Feadildn~~~Di~i~l~LTErviV~~~-~g~~~v~h~~Ep~~p~~~~--~~~~l~~~ge~~ 150 (155) T protein:vir:60 74 ENQPDIMTTDAGQKKGFTFYADINNDSSFDISISLMLTERTLVSEV-DGALHVKNIPEPPPPEPVT--RPVELYINGELV 150 (155) T ss_pred hcCcccccChhHhccCcEEEEEEcCCCeEeEEEEeeeeEEEEEEec-CCeEEEEecCCCCCCCCCC--CCceEEEcCcEE Confidence 99999999988776 5999999999999999999999999999975 6877654433332222220 000111 1 Q ss_pred ecccC Q lcl|NC_010275. 158 ANVRD 162 (162) Q Consensus 158 ~~~~~ 162 (162) +.-.| T Consensus 151 ~~w~e 155 (155) T protein:vir:60 151 SKWDE 155 (155) T ss_pred EeecC Confidence 11112 No 12 >protein:vir:2025 Length: 155 # NCBI annotation: gpR # Family: family:all:386 # MgeID: mge:315 # MgeName: P2 # Cross-refs: genbank:acc:NP_046768;genbank:gi:9630339;genbank:GeneID:1261515 Probab=100.00 E-value=2.6e-39 Score=232.10 Aligned_cols=147 Identities=18% Similarity=0.140 Sum_probs=117.3 Q ss_pred cccHHHHHHHHHHhcCc--cccceeeEEEecCEEEEcCCCcCCeeEEEEEEeeEEEEEEeCCCCccCHHHHHHHHHHHHh Q lcl|NC_010275. 6 GYKMQALKAHIEMCVGK--HIAQRLDAEMGNIELILTPRHMGNGIEICQQRYLAEFQIDRLPFKKYDPAVLFANVAAWLM 83 (162) Q Consensus 6 ~~Kl~sL~~~L~~~lp~--~~~~~l~~~~d~G~li~~~~~~g~g~~~~~~~Y~a~l~i~~fp~~~~dp~~L~a~v~~WL~ 83 (162) =.||+|||++|++++|. ++|++|++|+++|+|++|+.. + .+|+|+|+++|+++||++ ||+.||+||++||+ T Consensus 1 M~Kp~sLR~~L~~avp~L~~nPd~L~vfv~~G~i~~T~a~-s---lSfey~Ytl~i~i~Df~g---~~d~L~vpil~Wlr 73 (155) T protein:vir:20 1 MLKPDSLRRALTDAVTVLKTNPDMLRIFVDNGSIASTLAA-S---LSFEKRYTLNVIVTDFTG---DFDLLIVPVLAWLR 73 (155) T ss_pred CccHHHHHHHHHHhhhHhhcCcccEEEEEecCEEEEccCC-C---CCeEEEEEEEEEEEecCC---CHHHHHHHHHHHHH Confidence 57999999999999996 789999999999999999754 2 447899999999999999 99999999999999 Q ss_pred hcchhhhcccccCC-CceEEEEEcCCCeEEEEEEEeeeeeEEEEECCCCceeeCCEEEecccccceeeeEEEEE-----e Q lcl|NC_010275. 84 DNDADREDQLGELK-DPVIDVVVEDEDSAEVLIQVNFEEPIKLVEAESGLIYWQNKRWNIEEYPVWVAENLLDV-----V 157 (162) Q Consensus 84 ~nqpdl~~~~~~~~-~p~fdvdi~d~~taDv~I~l~l~E~v~v~~d~~G~i~~~Gkrw~l~~~~iw~Ae~~~~~-----~ 157 (162) +||||++.|+++++ +++|++|++||++|||+|+|+|||||+|+++ +|.+...-.-....+.++ ...-++. + T Consensus 74 ~~QPDll~np~~r~~g~~Feadildn~~~Di~i~l~LTErviV~~~-~g~~~v~h~~Ep~~p~~~--~~~~~l~~~ge~~ 150 (155) T protein:vir:20 74 ENQPDIMTTDEGQKKGFTFYADINNDSSFDISISLMLTERTLVSEV-DGALHVKNISEPPPPEPV--TRPMELYINGELV 150 (155) T ss_pred hcCcccccChhHhccCcEEEEEEcCCCeEeEEEEeeeeEEEEEEec-CCeEEEEecCCCCCCCCC--CCCeEEEEcCeEE Confidence 99999999988776 5999999999999999999999999999865 787765443333222221 0001111 1 Q ss_pred ecccC Q lcl|NC_010275. 158 ANVRD 162 (162) Q Consensus 158 ~~~~~ 162 (162) +.-.| T Consensus 151 ~~w~e 155 (155) T protein:vir:20 151 SKWDE 155 (155) T ss_pred EeecC Confidence 11122 No 13 >protein:vir:1837 Length: 155 # NCBI annotation: N protein # Family: family:all:386 # MgeID: mge:324 # MgeName: 186 # Cross-refs: genbank:acc:NP_052261;genbank:gi:9634068;genbank:GeneID:1262459 Probab=100.00 E-value=3e-39 Score=231.78 Aligned_cols=147 Identities=13% Similarity=0.074 Sum_probs=116.8 Q ss_pred cccHHHHHHHHHHhcCc--cccceeeEEEecCEEEEcCCCcCCeeEEEEEEeeEEEEEEeCCCCccCHHHHHHHHHHHHh Q lcl|NC_010275. 6 GYKMQALKAHIEMCVGK--HIAQRLDAEMGNIELILTPRHMGNGIEICQQRYLAEFQIDRLPFKKYDPAVLFANVAAWLM 83 (162) Q Consensus 6 ~~Kl~sL~~~L~~~lp~--~~~~~l~~~~d~G~li~~~~~~g~g~~~~~~~Y~a~l~i~~fp~~~~dp~~L~a~v~~WL~ 83 (162) =.||+|||++|++++|. ++|++|++|+++|+|++|+.. + .+|+|+|+++|+++||++ ||+.||+||++||+ T Consensus 1 M~Kp~sLR~~L~~avp~L~~nPd~L~vfv~~G~i~~t~a~-s---lSfey~Ytl~i~i~Df~g---~~d~l~vpil~Wlr 73 (155) T protein:vir:18 1 MQKHKSLRKALINAVPQLRNNPDMLRLFADNGHTDSRLAS-S---LSFEKVYVLNVVVTDFTG---DLDLIFVPVQAWLR 73 (155) T ss_pred CccHHHHHHHHHHhhhHhhcCcccEEEEEecCEEEEccCC-C---CCeEEEEEEEEEEEecCC---CHHHHHHHHHHHHH Confidence 57999999999999996 789999999999999999754 2 447899999999999999 99999999999999 Q ss_pred hcchhhhcccccCC-CceEEEEEcCCCeEEEEEEEeeeeeEEEEECCCCceeeCCEEEecccccceeeeEEEEEe----- Q lcl|NC_010275. 84 DNDADREDQLGELK-DPVIDVVVEDEDSAEVLIQVNFEEPIKLVEAESGLIYWQNKRWNIEEYPVWVAENLLDVV----- 157 (162) Q Consensus 84 ~nqpdl~~~~~~~~-~p~fdvdi~d~~taDv~I~l~l~E~v~v~~d~~G~i~~~Gkrw~l~~~~iw~Ae~~~~~~----- 157 (162) +||||++.|+++++ +++|++|++||++|||+|+|+|||||+|+ +++|.+...-.-....+..+ .+.-++.. T Consensus 74 ~~QPDll~np~~r~~g~~Fe~dildn~~~Di~i~l~LTErviV~-~~~g~~~v~h~~EP~~p~~~--~~~~~l~~~ge~~ 150 (155) T protein:vir:18 74 EHQPDIMTTDDGREKGFTWIIDINNDDSLDISISLRLTERTLVK-EVGGALHVSYAPEPPLPELV--KRPVAMYANGELV 150 (155) T ss_pred hcCcccccChhHhccCcEEEEEEcCCCeEeEEEEeeeeEEEEEE-cCCCeEEEEecCCCCCCCCC--CCceeEEEcCcEE Confidence 99999999998776 59999999999999999999999999776 68888766433322211111 00011111 Q ss_pred ecccC Q lcl|NC_010275. 158 ANVRD 162 (162) Q Consensus 158 ~~~~~ 162 (162) +.-.+ T Consensus 151 a~w~e 155 (155) T protein:vir:18 151 SQWDE 155 (155) T ss_pred EeecC Confidence 11111 No 14 >protein:vir:79131 Length: 144 # NCBI annotation: tail completion protein-like protein # Family: family:all:386 # MgeID: mge:1863 # MgeName: RSA1 # Cross-refs: genbank:acc:YP_001165265;genbank:gi:145708090;genbank:GeneID:5247142 Probab=100.00 E-value=1.3e-38 Score=228.31 Aligned_cols=135 Identities=14% Similarity=0.176 Sum_probs=113.9 Q ss_pred cccHHHHHHHHHHhcCc--cccceeeEEEecCEEEEcCCCcCCeeEEEEEEeeEEEEEEeCCCCccCHHHHHHHHHHHHh Q lcl|NC_010275. 6 GYKMQALKAHIEMCVGK--HIAQRLDAEMGNIELILTPRHMGNGIEICQQRYLAEFQIDRLPFKKYDPAVLFANVAAWLM 83 (162) Q Consensus 6 ~~Kl~sL~~~L~~~lp~--~~~~~l~~~~d~G~li~~~~~~g~g~~~~~~~Y~a~l~i~~fp~~~~dp~~L~a~v~~WL~ 83 (162) =.||+|||++|++++|. ++|++|.+|+++|+|++|+... .+|+|+|+++|+++||++ ||+.||+||++||+ T Consensus 1 M~Kp~sLR~~L~~avp~L~~nPd~L~vfv~~G~i~at~a~s----lSfey~Ytl~i~i~Df~g---~~d~l~vpil~Wl~ 73 (144) T protein:vir:79 1 MMKLTSLRDALTAGVPHLAANPDALHVFVDEGRVVGTGARS----LSFEYQYTLTLIVTDYPD---SSDTIVVPVLAWLR 73 (144) T ss_pred CccHHHHHHHHHHhchHhhcCcceEEEEEecCeEEEecCCC----CceEEEEEEEEEEEccCC---CHHHHHHHHHHHHH Confidence 57999999999999996 7899999999999999997542 457899999999999999 99999999999999 Q ss_pred hcchhhhcccccCC-CceEEEEEcCCCeEEEEEEEeeeeeEEEEECCCCceeeCCEEEecccc------cceeee Q lcl|NC_010275. 84 DNDADREDQLGELK-DPVIDVVVEDEDSAEVLIQVNFEEPIKLVEAESGLIYWQNKRWNIEEY------PVWVAE 151 (162) Q Consensus 84 ~nqpdl~~~~~~~~-~p~fdvdi~d~~taDv~I~l~l~E~v~v~~d~~G~i~~~Gkrw~l~~~------~iw~Ae 151 (162) +||||++.|+++++ +++|++|++||+++||+|+|+|||||+|+++++| +.. .+.-+|+ .-|.-- T Consensus 74 ~nQpDl~~np~~r~~g~~Fe~dildn~~~Di~i~l~LTErv~V~~~~g~-~~v---~h~~EP~~~~~~~~~w~~~ 144 (144) T protein:vir:79 74 TNQPDLFANDERRRDGFRFEAEILNHCTVDLSIKLQLTERVTVKPAGGG-YQV---EHHPEPVNDADDPASWRPN 144 (144) T ss_pred hcCcccccChhHhccCceEEEEEcCCCeEeEEEEeeceEEEEEEEcCCc-eEE---EecCCCCCCCCCCCcCCCC Confidence 99999999988876 5999999999999999999999999999988755 332 2222221 112221 No 15 >protein:vir:4461 Length: 186 # NCBI annotation: hypothetical protein # Family: family:all:964 # MgeID: mge:96 # MgeName: ST64B # Cross-refs: genbank:acc:NP_700384;genbank:gi:23505456;genbank:GeneID:955663 Probab=26.82 E-value=1.9 Score=19.05 Aligned_cols=97 Identities=18% Similarity=0.180 Sum_probs=53.8 Q ss_pred Cccccccc-----HHHHHHHHHHhc----CccccceeeEEEecCEEEEcCCCcCCeeEEEEEEeeEEEEEEeCCCCccCH Q lcl|NC_010275. 1 MSYRVGYK-----MQALKAHIEMCV----GKHIAQRLDAEMGNIELILTPRHMGNGIEICQQRYLAEFQIDRLPFKKYDP 71 (162) Q Consensus 1 ~~~~~~~K-----l~sL~~~L~~~l----p~~~~~~l~~~~d~G~li~~~~~~g~g~~~~~~~Y~a~l~i~~fp~~~~dp 71 (162) ...+.|.. +..|++-+..+| |. +..=-.....|+++.. .+|.....+.|++...|.+=+ T Consensus 76 ~~d~~G~~aa~D~l~~lr~~v~~AL~GW~P~--~~~~pi~~~gG~lvd~----~~g~l~y~~~F~~~~~l~~~~------ 143 (186) T protein:vir:44 76 ERDEKGQWASYDAVHDVRQEIWKALLGWEPD--SQVHEIQYAGGMLLDL----NRHELYYQFDFTVKYEITETD------ 143 (186) T ss_pred cCCCCCCccchHHHHHHHHHHHHHHcCcCcC--CCCceEEEcCceEEee----cCcEEEEEEEEEEeeccCCCC------ Confidence 33344432 334455554443 32 1111233446887754 345455556777777766422 Q ss_pred HHHHHHHHHHHhhcchhhhcccccCCCceEEEEEcC-----CCeEEEEEEEeeee Q lcl|NC_010275. 72 AVLFANVAAWLMDNDADREDQLGELKDPVIDVVVED-----EDSAEVLIQVNFEE 121 (162) Q Consensus 72 ~~L~a~v~~WL~~nqpdl~~~~~~~~~p~fdvdi~d-----~~taDv~I~l~l~E 121 (162) +| |+-++ ++...+...+|++|.+| +++.+...+++|.| T Consensus 144 --------t~---~~~~~-~~l~~l~~~~~~~d~~~p~~g~dg~~e~~~~~~~~~ 186 (186) T protein:vir:44 144 --------TR---QQDDL-DGLPDLKTLSIDVDFIEPGTGPDGDIEHHTEITFQE 186 (186) T ss_pred --------cc---chHHH-hCCCCcceEEEEEecccCCCCCCCceeeeEEEeecC Confidence 22 33344 34456777899998876 45677888888888 Done!