Query lcl|NC_010179.2_cdsid_YP_001642380.1 [gene=LJ771_037] [protein=hypothetical protein] [protein_id=YP_001642380.1] [location=23770..24210] Match_columns 146 No_of_seqs 88 out of 92 Neff 7.3 Searched_HMMs 1612 Date Thu Nov 7 13:06:58 2013 Command /home/guerois/workspace/virfam/python/lib/hhsearch//hhsearch2 -i .//seq/seq_37 -d /home/guerois/workspace/virfam/python/profile_database/capsid_neck_tail.hhm -glob -cpu 7 -o .//seq/HHR/seq_37_vs_rec_db.hhr No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM 1 protein:vir:105468 Length: 135 100.0 6.4E-48 4E-51 279.3 15.3 135 1-135 1-135 (135) 2 protein:vir:79047 Length: 145 100.0 1.6E-45 9.9E-49 266.2 15.9 141 1-141 3-145 (145) 3 protein:vir:102955 Length: 138 100.0 2.5E-45 1.5E-48 265.1 15.4 133 1-137 6-138 (138) 4 protein:vir:102339 Length: 150 99.9 4.8E-31 3E-34 186.8 13.7 136 1-137 5-150 (150) 5 protein:vir:3428 Length: 131 # 92.7 0.0063 3.9E-06 32.6 10.0 111 1-114 4-131 (131) 6 protein:vir:94921 Length: 125 91.6 0.015 9.3E-06 30.6 11.8 116 1-118 4-125 (125) 7 protein:vir:397 Length: 132 # 89.5 0.026 1.6E-05 29.3 10.2 112 1-114 4-132 (132) 8 protein:vir:79571 Length: 137 87.5 0.038 2.4E-05 28.3 9.7 112 1-114 9-137 (137) 9 protein:vir:81066 Length: 118 87.0 0.041 2.6E-05 28.2 11.3 114 1-119 1-118 (118) 10 protein:vir:9880 Length: 136 # 85.8 0.05 3.1E-05 27.7 12.2 116 1-119 8-136 (136) 11 protein:vir:98890 Length: 131 82.8 0.074 4.6E-05 26.8 11.3 118 1-122 1-131 (131) 12 protein:vir:10368 Length: 118 81.3 0.087 5.4E-05 26.4 11.5 115 1-119 1-118 (118) 13 protein:vir:97070 Length: 118 79.0 0.11 6.7E-05 25.9 11.1 114 1-119 1-118 (118) 14 protein:vir:1580 Length: 134 # 77.2 0.13 7.9E-05 25.5 12.1 119 1-123 1-134 (134) 15 protein:vir:10327 Length: 182 52.2 0.56 0.00035 22.0 14.9 145 1-146 7-176 (182) 16 protein:vir:4348 Length: 121 # 49.5 0.64 0.0004 21.7 9.1 111 1-118 1-121 (121) 17 protein:vir:1892 Length: 121 # 46.5 0.73 0.00046 21.3 8.3 111 1-118 3-121 (121) 18 protein:vir:744 Length: 129 # 41.5 0.92 0.00057 20.8 11.9 113 1-117 7-129 (129) 19 protein:vir:3618 Length: 129 # 37.7 1.1 0.00069 20.3 12.0 113 1-117 7-129 (129) 20 protein:vir:107704 Length: 132 36.7 1.2 0.00072 20.2 11.1 116 1-121 3-132 (132) 21 protein:vir:2741 Length: 128 # 34.8 1.3 0.00079 20.0 11.8 113 1-117 6-128 (128) 22 protein:vir:3972 Length: 129 # 32.8 1.4 0.00087 19.8 12.5 113 1-117 7-129 (129) 23 protein:vir:1438 Length: 115 # 32.1 1.4 0.0009 19.7 6.2 111 1-116 1-115 (115) 24 protein:vir:1029 Length: 131 # 30.6 1.6 0.00097 19.5 10.5 120 1-122 1-131 (131) 25 protein:vir:3995 Length: 131 # 30.6 1.6 0.00097 19.5 10.5 120 1-122 1-131 (131) 26 protein:vir:100116 Length: 115 29.1 1.7 0.001 19.3 6.3 111 1-116 1-115 (115) 27 protein:vir:9824 Length: 132 # 28.0 1.8 0.0011 19.2 11.7 117 1-122 3-132 (132) 28 protein:vir:3037 Length: 132 # 28.0 1.8 0.0011 19.2 11.7 117 1-122 3-132 (132) 29 protein:vir:100200 Length: 123 27.3 1.9 0.0012 19.1 10.8 115 1-118 1-123 (123) 30 protein:vir:4907 Length: 128 # 25.6 2 0.0013 18.9 12.1 113 1-117 6-128 (128) 31 protein:vir:96485 Length: 128 25.0 2.1 0.0013 18.8 12.0 113 1-117 6-128 (128) 32 protein:vir:1387 Length: 116 # 22.7 2.4 0.0015 18.5 9.0 110 1-119 4-116 (116) 33 protein:vir:104348 Length: 129 20.4 2.8 0.0017 18.2 10.8 112 1-117 3-129 (129) No 1 >protein:vir:105468 Length: 135 # NCBI annotation: hypothetical protein # Family: family:all:1535 # MgeID: mge:1502 # MgeName: KC5a # Cross-refs: genbank:acc:YP_529878;genbank:gi:90592618;genbank:GeneID:3974532 Probab=100.00 E-value=6.4e-48 Score=279.32 Aligned_cols=135 Identities=93% Similarity=1.362 Sum_probs=130.4 Q ss_pred ChhHHHHHHHHHHhcCCceeecCccccCCcCCeEEEEEeccccccccccEEEEEEEEEEEEeeCCCChhhHHHHHHHHHH Q lcl|NC_010179. 1 MTIVERIAKRISEIFPDVTIYSERQKSGFEVPSFYISKIMTITKNRFFDIQDRHLSYSITYFANPDQPNADMEEVEQKLL 80 (146) Q Consensus 1 ~eI~~aI~~~Lk~~fpd~~IY~e~i~qg~~~PcFfV~l~~~~~~~~~~~r~~r~~~~~I~Yfp~~~~~~~~~~~v~e~L~ 80 (146) |+|++||+++|++.|||++||.|+++|||++|||||+++++++++.+++||+|+++|+|+|||++++++++|++|||+|+ T Consensus 1 ~~ii~~I~~~L~~~fpd~~IY~e~i~Qg~~~PcFFI~~l~~~~~~~~~~ry~r~~~fdI~Yfp~~~~~~~e~~~vae~L~ 80 (135) T protein:vir:10 1 MTIVERIAKRISEIFPDVTIYSEKQKSGFQVPSFYISKIMTVTKSRFFDIQDRSLSYSITYFANPDRPNADMEEVEQKLL 80 (135) T ss_pred ChhHHHHHHHHHHhcCceeeecccccCCCcCCeeEEEEecCCccccccceEEEEeeEEEEEeecCCCchhhHHHHHHHHH Confidence 99999999999999999999999999999999999999999999999999999999999999988889999999999999 Q ss_pred hhhhccCCeeeEeecceeEEeeCCEEEEEEEEEEEEEecCCccccceeeeeeeee Q lcl|NC_010179. 81 NNFTRLDDYATVRNRETTINQDDETLVMSFDLRVEMYPVEDGGKLERIEVNGGLQ 135 (146) Q Consensus 81 ~~~~~i~~~~~i~~~~~~~~~~d~~L~f~f~~~~~~~~~e~~~~M~~L~~~g~ik 135 (146) ++|+++++.+.++++++++...||+|||+|+|+|++.++++.++|++|+++|+|| T Consensus 81 ~~le~i~~~~~~~~~~~~i~~~D~VLhf~~~~~~~~~k~~~~~~M~~l~~~~~ik 135 (135) T protein:vir:10 81 NNFTRLDDYATVRNRETTINQDDETLVMSFDLRLEMYPVQDGGKLERIEFNGGIQ 135 (135) T ss_pred HhhhhcCceeEEeCCceEEEeecCeEEEEEEEEEEEeecCCcchhhhhhhccCcC Confidence 9999998878888888887767999999999999999999999999999999999 No 2 >protein:vir:79047 Length: 145 # NCBI annotation: hypothetical protein # Family: family:all:1535 # MgeID: mge:1861 # MgeName: phiC2 # Cross-refs: genbank:acc:YP_001110730;genbank:gi:134287347;genbank:GeneID:4955221 Probab=100.00 E-value=1.6e-45 Score=266.18 Aligned_cols=141 Identities=21% Similarity=0.377 Sum_probs=132.6 Q ss_pred ChhHHHHHHHHHHhcCC-ceeecCccccCCcCCeEEEEEeccccccccccEEEEEEEEEEEEeeCCCChhhHHHHHHHHH Q lcl|NC_010179. 1 MTIVERIAKRISEIFPD-VTIYSERQKSGFEVPSFYISKIMTITKNRFFDIQDRHLSYSITYFANPDQPNADMEEVEQKL 79 (146) Q Consensus 1 ~eI~~aI~~~Lk~~fpd-~~IY~e~i~qg~~~PcFfV~l~~~~~~~~~~~r~~r~~~~~I~Yfp~~~~~~~~~~~v~e~L 79 (146) -+|++||+++|++.||+ ++||.++++|||++|||||+++++++++.+++||+|+++|+|+|||+++.++++|++||++| T Consensus 3 ~dI~~aI~~~Lk~~Fp~~~~IY~e~i~Qgf~~PcFFI~ll~~~~~~~~~~r~~r~~~~dI~Yfp~~~~~~~e~~ev~e~L 82 (145) T protein:vir:79 3 NNIIDGISVKLDKSFGEKYTIYSEDVEQGINEPCFFIVPLNPSKTPYPSGRELKKNSFDVHYFPRSEAKNFEINEIAEML 82 (145) T ss_pred HHHHHHHHHHHHHhcCCceEEEecccccCccCCeeEEEEeccccccccCceEEEEEEEEEEEeecCCCCchhHHHHHHHH Confidence 89999999999999996 89999999999999999999999999999999999999999999998888899999999999 Q ss_pred HhhhhccC-CeeeEeecceeEEeeCCEEEEEEEEEEEEEecCCccccceeeeeeeeecCCCcc Q lcl|NC_010179. 80 LNNFTRLD-DYATVRNRETTINQDDETLVMSFDLRVEMYPVEDGGKLERIEVNGGLQEDGNRD 141 (146) Q Consensus 80 ~~~~~~i~-~~~~i~~~~~~~~~~d~~L~f~f~~~~~~~~~e~~~~M~~L~~~g~ik~~~~~~ 141 (146) ...|+++. ++-++++++++++..||+|||+|+|++++.++++.++|++|+++|++|+|+|-+ T Consensus 83 ~~~le~i~v~~~~~~~~~~~~eivDgvLhf~~~~~~~~~k~~~~~~M~~l~~~~~ik~~~~~~ 145 (145) T protein:vir:79 83 LEELEYIEINGDLVRGTNMNFEIIDNVLHFFVDYNYFTIKSNNADKMNTVELFGGLKRGDNFE 145 (145) T ss_pred HhhhcceeecCcEEeeecceeEEeeceEEEEEEEEEEEeeecCccchheeeeecccccCCCCC Confidence 99998885 344666777777888999999999999999999999999999999999999999 No 3 >protein:vir:102955 Length: 138 # NCBI annotation: hypothetical protein # Family: family:all:1535 # MgeID: mge:1461 # MgeName: EJ-1 # Cross-refs: genbank:acc:NP_945290;genbank:gi:39653725;uniprot:Q708M2;genbank:GeneID:2672869 Probab=100.00 E-value=2.5e-45 Score=265.11 Aligned_cols=133 Identities=18% Similarity=0.332 Sum_probs=126.7 Q ss_pred ChhHHHHHHHHHHhcCCceeecCccccCCcCCeEEEEEeccccccccccEEEEEEEEEEEEeeCCCChhhHHHHHHHHHH Q lcl|NC_010179. 1 MTIVERIAKRISEIFPDVTIYSERQKSGFEVPSFYISKIMTITKNRFFDIQDRHLSYSITYFANPDQPNADMEEVEQKLL 80 (146) Q Consensus 1 ~eI~~aI~~~Lk~~fpd~~IY~e~i~qg~~~PcFfV~l~~~~~~~~~~~r~~r~~~~~I~Yfp~~~~~~~~~~~v~e~L~ 80 (146) .+|++||+++|+++|||++||+|+++|||++|||||+++++++++.+++||+|+++|+|+|||+++ ++++|++|||+|. T Consensus 6 ~~I~~aI~~~Lk~~fpd~~Iy~e~i~Qgf~~PcFFI~ll~~~~~~~~~~r~~r~~~~dI~Yfp~~~-~~~e~~~v~e~L~ 84 (138) T protein:vir:10 6 FRLVEELVSHIKGLYPDIRIYLDEVEQGFKEPCFFIHVVDTKYTPEANKYVKVRSKVDLSYFPPKK-KRSECLAMQEELS 84 (138) T ss_pred hhhHHHHHHHHHHhcCCceeeecccccCCcCCeEEEEEecccCccccCceEEEEEEEEEEEecCcc-hhHHHHHHHHHHH Confidence 999999999999999999999999999999999999999999999999999999999999999764 5899999999999 Q ss_pred hhhhccCCeeeEeecceeEEeeCCEEEEEEEEEEEEEecCCccccceeeeeeeeecC Q lcl|NC_010179. 81 NNFTRLDDYATVRNRETTINQDDETLVMSFDLRVEMYPVEDGGKLERIEVNGGLQED 137 (146) Q Consensus 81 ~~~~~i~~~~~i~~~~~~~~~~d~~L~f~f~~~~~~~~~e~~~~M~~L~~~g~ik~~ 137 (146) .+|++++ ++++.++++++.||+|||+|+|++++.++++.++|++|+++|++|+| T Consensus 85 ~~f~~~~---~i~~~~~~~~I~DgVLhf~f~~~~~~~k~~~~~~M~~l~~~~~~k~g 138 (138) T protein:vir:10 85 YKLLHLP---TIHLFDRQYEVVDNVLHCIFNASTRLKLEEEDIKQRELKVKEEVKDG 138 (138) T ss_pred HHHhhcC---eeeeecceeeEEcCeEEEEEEEEEEEeeecCccchhhhhhccccccC Confidence 9999985 46777888888899999999999999999999999999999999999 No 4 >protein:vir:102339 Length: 150 # NCBI annotation: hypothetical protein # Family: family:all:1535 # MgeID: mge:1566 # MgeName: phi CD119 # Cross-refs: genbank:acc:YP_529564;genbank:gi:90592649;genbank:GeneID:3974471 Probab=99.95 E-value=4.8e-31 Score=186.79 Aligned_cols=136 Identities=15% Similarity=0.227 Sum_probs=116.6 Q ss_pred ChhHHHHHHHHHHhcCCceeecCccc-cCCcCCeEEEEEeccccccccccEEEEEEEEEEEEeeCCCChhhHHHHHHHHH Q lcl|NC_010179. 1 MTIVERIAKRISEIFPDVTIYSERQK-SGFEVPSFYISKIMTITKNRFFDIQDRHLSYSITYFANPDQPNADMEEVEQKL 79 (146) Q Consensus 1 ~eI~~aI~~~Lk~~fpd~~IY~e~i~-qg~~~PcFfV~l~~~~~~~~~~~r~~r~~~~~I~Yfp~~~~~~~~~~~v~e~L 79 (146) ++|+.||+++||+.||+ +||.++.. |||++|||||++++.+.+.....++.|.+.++|.|||++..++.+|++||++| T Consensus 5 ~DIl~ain~~Lk~~f~~-~i~~ne~~~egfk~PcFFV~il~~~~~~~~~~~~~k~i~idI~Y~pd~~~~~~~~~ev~~~L 83 (150) T protein:vir:10 5 KDILYSFTKELGNNFNE-DIFVEGYNIQDNKKSCFFVQILPEVAQTATKKTDIKSFLVDIKYLPDWKKKKTDLFDILNKL 83 (150) T ss_pred HHHHHHHHHHHHhhcCC-CcccCceeccCCCCCeeEEEEeecccccccceeEeEEEEEEEEEecchhhhhhhHHHHHHHH Confidence 99999999999999997 88877777 99999999999999999999999999999999999999888999999999999 Q ss_pred Hhhh----hccCCeeeEeecceeEEe--eCCEEEEEEEEEEEEEec-CC--ccccceeeeeeeeecC Q lcl|NC_010179. 80 LNNF----TRLDDYATVRNRETTINQ--DDETLVMSFDLRVEMYPV-ED--GGKLERIEVNGGLQED 137 (146) Q Consensus 80 ~~~~----~~i~~~~~i~~~~~~~~~--~d~~L~f~f~~~~~~~~~-e~--~~~M~~L~~~g~ik~~ 137 (146) ...| .+.++.+++++++.+++. .+|+|||+|+++|++.+. ++ .+.|++|.++-+=|.+ T Consensus 84 e~lF~~~ikV~dr~l~~~~~~~~i~~d~~~g~L~F~l~lny~d~~~~e~e~~e~Me~l~~~~~g~~~ 150 (150) T protein:vir:10 84 ENIFTRNIKVKDRYLTFSKKNGSIEKDEIGNYVQFLISINYHEQIYFEEEKHELMEELNMRFKGRSD 150 (150) T ss_pred HHhcccCCceeeeEeeeecccceeeeeccCcEEEEEEEEEEeeccccccccccchhheeeeecccCC Confidence 9888 344688999988888754 468999999999998643 33 3679988885333322 No 5 >protein:vir:3428 Length: 131 # NCBI annotation: tail component # Family: family:all:911 # MgeID: mge:70 # MgeName: lambda # Cross-refs: genbank:acc:NP_040591;genbank:gi:9626255;genbank:GeneID:2703486 Probab=92.66 E-value=0.0063 Score=32.64 Aligned_cols=111 Identities=8% Similarity=0.152 Sum_probs=68.1 Q ss_pred ChhHHHHHHHHHHhcCCceeecCc---cccCCcCCeEEEEEecccccccc--ccEEEEEEEEEEEEeeCCCChhhHHHHH Q lcl|NC_010179. 1 MTIVERIAKRISEIFPDVTIYSER---QKSGFEVPSFYISKIMTITKNRF--FDIQDRHLSYSITYFANPDQPNADMEEV 75 (146) Q Consensus 1 ~eI~~aI~~~Lk~~fpd~~IY~e~---i~qg~~~PcFfV~l~~~~~~~~~--~~r~~r~~~~~I~Yfp~~~~~~~~~~~v 75 (146) =+|+++|..+|++..|++.+|... +. .-+-|+.-|.+...+.+... ...|+-.+.+.| |.+. ...-.++.++ T Consensus 4 t~IR~~Vid~L~~~l~~v~~fdG~P~fid-e~ElPAVAV~l~d~~~~~~~ld~~~w~A~LhI~i-yLka-~~~ds~LD~~ 80 (131) T protein:vir:34 4 TELRAAVLDALEKHDTGATFFDGRPAVFD-EADFPAVAVYLTGAEYTGEELDSDTWQAELHIEV-FLPA-QVPDSELDAW 80 (131) T ss_pred HHHHHHHHHHHhccCCceEEecCCceeec-cccCcEEEEEeecCCCCcceecCCeeEEEEEEEE-Eeec-CCCHHHHHHH Confidence 789999999999999998877653 22 22569999999999998888 555554444443 5654 4455678888 Q ss_pred HHH-HHhhhhccCC--ee--eEeecceeEEeeCC-------EEEEEEEEEE Q lcl|NC_010179. 76 EQK-LLNNFTRLDD--YA--TVRNRETTINQDDE-------TLVMSFDLRV 114 (146) Q Consensus 76 ~e~-L~~~~~~i~~--~~--~i~~~~~~~~~~d~-------~L~f~f~~~~ 114 (146) ++. ++..+.-.+. ++ .+.-.++..+-++. .|+|+++|.+ T Consensus 81 ~E~~i~~v~~~~~~l~~l~~~~~~~gy~Y~rD~e~~tW~sadL~y~ItY~~ 131 (131) T protein:vir:34 81 MESRIYPVMSDIPALSDLITSMVASGYDYRRDDDAGLWSSADLTYVITYEM 131 (131) T ss_pred HHHHhHHHhhcchhhhhHhhhhhhccCCcccccccceEEEEEEEEEEEEeC Confidence 775 5555543321 10 11222222222211 3666666554 No 6 >protein:vir:94921 Length: 125 # NCBI annotation: possible peptidoglycan binding protein # Family: family:all:5248 # MgeID: mge:1538 # MgeName: Xp15 # Cross-refs: genbank:acc:YP_239283;genbank:gi:66392065;genbank:GeneID:5076566 Probab=91.63 E-value=0.015 Score=30.59 Aligned_cols=116 Identities=8% Similarity=0.045 Sum_probs=76.4 Q ss_pred ChhHHHHHHHHHHhcCCceeecCccccCCcCCeEEEEEec----cccccccccEEEEEEEEEEEEeeCCCChhhHHHHHH Q lcl|NC_010179. 1 MTIVERIAKRISEIFPDVTIYSERQKSGFEVPSFYISKIM----TITKNRFFDIQDRHLSYSITYFANPDQPNADMEEVE 76 (146) Q Consensus 1 ~eI~~aI~~~Lk~~fpd~~IY~e~i~qg~~~PcFfV~l~~----~~~~~~~~~r~~r~~~~~I~Yfp~~~~~~~~~~~v~ 76 (146) -+++++|...+....|+.+|.-+..+ ......++++.- ..+.-..+.++.++-.+-|+=|...........++| T Consensus 4 ~q~r~~I~~r~~a~~~~~~I~~~N~p--p~~~~~W~Rlti~~g~~~~a~iG~~~~~rtGli~iqiF~p~~~G~~~~~~~a 81 (125) T protein:vir:94 4 FQEKLDIENYFKANWPDTPIFYENRT--ANSTGTWVRLTIQNGDAFQASNGEVSYRHPGVVFVQIFTKKEVGSGEALKLA 81 (125) T ss_pred HHHHHHHHHHHHhCCCccceeeCCCC--CCCCCceEEEEeccCcccccccCCceeeeeeEEEEEeeecCCcChHHHHHHH Confidence 68899999999999999898887754 222357777662 222223357788999999998865555567899999 Q ss_pred HHHHhhhhccC-CeeeEeeccee-EEeeCCEEEEEEEEEEEEEe Q lcl|NC_010179. 77 QKLLNNFTRLD-DYATVRNRETT-INQDDETLVMSFDLRVEMYP 118 (146) Q Consensus 77 e~L~~~~~~i~-~~~~i~~~~~~-~~~~d~~L~f~f~~~~~~~~ 118 (146) ++|.+.|+... +.+-..+.+.. +-.++|=+.+++...|+--. T Consensus 82 d~~~~~f~~~~~g~i~f~~~~~~~~g~~~gwyQ~Nv~I~f~~~~ 125 (125) T protein:vir:94 82 DKVDALFRSKTLGNIQFKVPQVQKVPSTTEWYQVNVSTEFYRGS 125 (125) T ss_pred HHHHHHHccCCCCceEEeeceecCCCCCCCEEEEEEEEeeecCC Confidence 99999998875 33333333222 11234446665555554322 No 7 >protein:vir:397 Length: 132 # NCBI annotation: gp12 # Family: family:all:911 # MgeID: mge:325 # MgeName: N15 # Cross-refs: genbank:acc:NP_046907;genbank:gi:9630477;genbank:GeneID:1261651 Probab=89.51 E-value=0.026 Score=29.28 Aligned_cols=112 Identities=10% Similarity=0.122 Sum_probs=63.1 Q ss_pred ChhHHHHHHHHHHhcCC-ceeecCc---cccCCcCCeEEEEEeccccccccccEEEEEEEEEEE-EeeCCCChhhHHHHH Q lcl|NC_010179. 1 MTIVERIAKRISEIFPD-VTIYSER---QKSGFEVPSFYISKIMTITKNRFFDIQDRHLSYSIT-YFANPDQPNADMEEV 75 (146) Q Consensus 1 ~eI~~aI~~~Lk~~fpd-~~IY~e~---i~qg~~~PcFfV~l~~~~~~~~~~~r~~r~~~~~I~-Yfp~~~~~~~~~~~v 75 (146) =+|+++|...|++..|+ +.+|... +. .-+-|+.-|.+...+.+.+.-.--..+..+.|. |.+. ...-.++.++ T Consensus 4 t~IR~~Vid~L~~~l~~~~~ffdGrP~fiD-e~elPAVAV~l~d~~~~~~~ld~~~w~A~LhI~iyLka-~~~ds~LD~~ 81 (132) T protein:vir:39 4 RDIRKVIIDALESAIGTDAIYFDGRPAVLE-EGDFPAVAVYLTDAEYTGEELDADTWQAILHIEVFLEA-QVPDSELDDW 81 (132) T ss_pred HHHHHHHHHHHHhhCCCceEEecCcceeec-cccCcEEEEEeecCCCCcceecCCeeEEEEEEEEEeec-CCCHHHHHHH Confidence 78999999999999887 3333322 11 124599999999988888654433344445554 5664 3345678999 Q ss_pred HHHH-Hhhhhc------cCCeeeEeecceeEEeeCC-----EEEEEEEEEE Q lcl|NC_010179. 76 EQKL-LNNFTR------LDDYATVRNRETTINQDDE-----TLVMSFDLRV 114 (146) Q Consensus 76 ~e~L-~~~~~~------i~~~~~i~~~~~~~~~~d~-----~L~f~f~~~~ 114 (146) +|.. +..+.- +.+.....|.+..-.+.-. .|+|+++|.. T Consensus 82 aE~~i~p~i~~~~~l~~l~~~~~~~gy~Y~rD~~~atW~sadL~y~ItY~~ 132 (132) T protein:vir:39 82 METRVYPVLAEVPGLESLITTMVQQGYDYQRDDDMALWSSADLKYSITYDM 132 (132) T ss_pred HHHHhHhhhcccchhhhHhhhhhhcCCCcccccccceEEEEEEEEEEEEeC Confidence 8854 322222 1111222223322211111 3666666654 No 8 >protein:vir:79571 Length: 137 # NCBI annotation: putative tail component # Family: family:all:911 # MgeID: mge:1871 # MgeName: cdtI # Cross-refs: genbank:acc:YP_001272522;genbank:gi:148609391;genbank:GeneID:5204407 Probab=87.50 E-value=0.038 Score=28.35 Aligned_cols=112 Identities=11% Similarity=0.162 Sum_probs=65.5 Q ss_pred ChhHHHHHHHHHHhcCCc-eeecCc---cccCCcCCeEEEEEeccccccccccEEEEEEEEEEE-EeeCCCChhhHHHHH Q lcl|NC_010179. 1 MTIVERIAKRISEIFPDV-TIYSER---QKSGFEVPSFYISKIMTITKNRFFDIQDRHLSYSIT-YFANPDQPNADMEEV 75 (146) Q Consensus 1 ~eI~~aI~~~Lk~~fpd~-~IY~e~---i~qg~~~PcFfV~l~~~~~~~~~~~r~~r~~~~~I~-Yfp~~~~~~~~~~~v 75 (146) =+|+++|..+|++..|+. .+|... +... +-|+.-|.+...+.+...-..-..+..+.|. |.+. ...-.++.++ T Consensus 9 t~IR~~Vid~L~~~l~~~~~ffdGrP~fiDe~-ElPAVAV~l~da~~~~~~ld~~~W~A~LhI~iyLka-~~~ds~LD~~ 86 (137) T protein:vir:79 9 TQIRQVVLARLREQCGDSATFFDGLPAFVDAQ-ELPAVSVWLSDAQYTGKMTDEDDWQAVLHIAVFIRA-QAPDSELDMW 86 (137) T ss_pred HHHHHHHHHHHHhhcCCcEEEeCCccceechh-hCcEEEEEeecCCCCcceecCCeeEEEEEEEEEeec-CCCHHHHHHH Confidence 579999999999998873 333322 1221 5799999999999998885555555566665 5654 4445678887 Q ss_pred HHH-HHhhhhccC------CeeeEeecceeEEeeC-----CEEEEEEEEEE Q lcl|NC_010179. 76 EQK-LLNNFTRLD------DYATVRNRETTINQDD-----ETLVMSFDLRV 114 (146) Q Consensus 76 ~e~-L~~~~~~i~------~~~~i~~~~~~~~~~d-----~~L~f~f~~~~ 114 (146) ++. ++..+.-.. +.....|.+..-.+.- -.|+|+++|.- T Consensus 87 ~E~~I~~v~~~~~~l~~l~~~~~~~gY~Y~rD~e~~tW~sadL~y~ItYe~ 137 (137) T protein:vir:79 87 MESTIFPALNDVPALSGLIDTLIPLGFNYQRDNEMATWAMAEITYQITYTN 137 (137) T ss_pred HHHHHHHhhcchhhhhhHhhhhhcccCCcccccccceeEEEEEEEEEEEcC Confidence 774 554443321 1122223333221111 12555555543 No 9 >protein:vir:81066 Length: 118 # NCBI annotation: p13 # Family: family:all:3244 # MgeID: mge:1889 # MgeName: Xop411 # Cross-refs: genbank:acc:YP_001285683;genbank:gi:148727191;genbank:GeneID:5247111 Probab=87.03 E-value=0.041 Score=28.16 Aligned_cols=114 Identities=7% Similarity=0.047 Sum_probs=74.7 Q ss_pred ChhHHHHHHHHHHhcCCceeecCccccCCc-CCeEEEEEecccccccccc-E-EEEEEEEEEEEeeCCCChhhHHHHHHH Q lcl|NC_010179. 1 MTIVERIAKRISEIFPDVTIYSERQKSGFE-VPSFYISKIMTITKNRFFD-I-QDRHLSYSITYFANPDQPNADMEEVEQ 77 (146) Q Consensus 1 ~eI~~aI~~~Lk~~fpd~~IY~e~i~qg~~-~PcFfV~l~~~~~~~~~~~-r-~~r~~~~~I~Yfp~~~~~~~~~~~v~e 77 (146) |.+-..|...|...+|+ .||-.-.++|.. .|+...+.+.......+.+ . -.+...|+|.=+... ..+..++++ T Consensus 1 Ms~e~~l~a~L~~~~~~-Rvyp~~aP~~~~~~Pyiv~q~vsg~p~~~l~G~~~~~~~~rvQIdvyA~t---~~~A~~l~~ 76 (118) T protein:vir:81 1 MSYGRVLKDLLDPVFSG-RVYADIPPDSPPLDAYAIYQRVGGVPVYWQEGGMPEKVNARVQIQIWSRS---KQEAYLATV 76 (118) T ss_pred CchHHHHHHHHHhhcCC-ccccccCCCCCccCceEEEEecCCcccccccCCCCCccceeEEEEEeeCC---HHHHHHHHH Confidence 99999999999999986 999999999987 5999999999888877755 2 345567777766543 234555555 Q ss_pred HHHhhhhccCCeeeEeecce-eEEeeCCEEEEEEEEEEEEEec Q lcl|NC_010179. 78 KLLNNFTRLDDYATVRNRET-TINQDDETLVMSFDLRVEMYPV 119 (146) Q Consensus 78 ~L~~~~~~i~~~~~i~~~~~-~~~~~d~~L~f~f~~~~~~~~~ 119 (146) .+...+.-.... ...+... ..+...+....++++..+-.-. T Consensus 77 av~~al~~~~~~-~~~~~~~d~ye~dt~l~r~~~Df~iw~~~~ 118 (118) T protein:vir:81 77 QVLRLVSEAPDM-QVLSQPIDDYVREIKLYGSRVDVSMWYPIT 118 (118) T ss_pred HHHHHhhhccce-eeccCCccccccccCceeEEEEEEEEecCC Confidence 555555432211 1112211 2333446677788877553333 No 10 >protein:vir:9880 Length: 136 # NCBI annotation: hypothetical protein # Family: family:all:1887 # MgeID: mge:177 # MgeName: 315.5 # Cross-refs: genbank:acc:NP_795642;genbank:gi:28876399;genbank:GeneID:1257930 Probab=85.79 E-value=0.05 Score=27.71 Aligned_cols=116 Identities=10% Similarity=0.163 Sum_probs=74.1 Q ss_pred ChhHHHHHHHHHHhcCCceeecCccccCCcCCeEEEEEeccccccccccEEEEEEEEEEEEeeCCCChhhHHHHHHHHHH Q lcl|NC_010179. 1 MTIVERIAKRISEIFPDVTIYSERQKSGFEVPSFYISKIMTITKNRFFDIQDRHLSYSITYFANPDQPNADMEEVEQKLL 80 (146) Q Consensus 1 ~eI~~aI~~~Lk~~fpd~~IY~e~i~qg~~~PcFfV~l~~~~~~~~~~~r~~r~~~~~I~Yfp~~~~~~~~~~~v~e~L~ 80 (146) |+++.||.+++.+.= +-..|+ +++.....|-.||..++..... ..-.|.-.++|-|+=+.++.+.....++|-++|. T Consensus 8 ~~l~~aV~~~iee~t-gL~c~d-~~p~~ep~Pfyfie~I~~rpe~-sKtmw~e~y~~~IHais~~g~t~~~~~~mI~~l~ 84 (136) T protein:vir:98 8 VDLHASIKQKIEDKT-GLMAYD-HVPEDMPSPFYFIEVVDKRPED-TKVMWCEVFTVWIHAIAEAGKSKIAIYDMIEKLE 84 (136) T ss_pred HHHHHHHHHHhhccC-CceEEE-ecccCCCCCEEEEEeecCCccc-cceeeeeEEEEEEEEEcCCCCccchHHHHHHHHH Confidence 999999999998874 577775 4566688999999999766543 4567888999999999876656677889999987 Q ss_pred hhhh---ccCCeeeE---e--ecceeEEeeCCEEE----EEEEEEEEE-Eec Q lcl|NC_010179. 81 NNFT---RLDDYATV---R--NRETTINQDDETLV----MSFDLRVEM-YPV 119 (146) Q Consensus 81 ~~~~---~i~~~~~i---~--~~~~~~~~~d~~L~----f~f~~~~~~-~~~ 119 (146) +++. .++.++.+ + |.+-=.++..|.-| |.+...|-. -|+ T Consensus 85 EAlte~i~Lpe~y~l~~q~~~G~q~~~~~etge~HAi~~fei~vsygfkVKi 136 (136) T protein:vir:98 85 EALTEELVLPEEIDILRQSEVGMQSLQEDETGEMHAIVAYEIKVSYGFKVKV 136 (136) T ss_pred hhhhceeecCCCeEEEEEechhhhheecccCCceeeeeeEEEEEeeeEEEeC Confidence 7763 23332221 1 22111233333333 223222211 122 No 11 >protein:vir:98890 Length: 131 # NCBI annotation: hypothetical protein # Family: family:all:1267 # MgeID: mge:1568 # MgeName: BCJA1c # Cross-refs: genbank:acc:YP_164423;genbank:gi:56694913;genbank:GeneID:3197280 Probab=82.80 E-value=0.074 Score=26.79 Aligned_cols=118 Identities=16% Similarity=0.255 Sum_probs=75.9 Q ss_pred ChhHHHHHHHHHHhcCC--ceeecCccccCCcCCeEEEEEeccccc--cccccEEEEEEEEEEEEeeCCC-ChhhHHHHH Q lcl|NC_010179. 1 MTIVERIAKRISEIFPD--VTIYSERQKSGFEVPSFYISKIMTITK--NRFFDIQDRHLSYSITYFANPD-QPNADMEEV 75 (146) Q Consensus 1 ~eI~~aI~~~Lk~~fpd--~~IY~e~i~qg~~~PcFfV~l~~~~~~--~~~~~r~~r~~~~~I~Yfp~~~-~~~~~~~~v 75 (146) |+.++++++.+... |+ .++...=... .-++-|...|+++. ..+.+.+.+++.|.|.-=.++. .++.-++.| T Consensus 1 mDf~e~l~~~I~~~-~~Lp~k~~~~yL~~---~~sl~lyp~PGs~~~~ey~dG~~~~sl~fEIa~ktKd~~~a~~~Lw~I 76 (131) T protein:vir:98 1 MDFIERLTERVNSI-PGLPISCKKGYLGT---EESFVVYPLPGSRTVSQYMDGTKDRRLNYEFAMKSKSQRKIDETLWLV 76 (131) T ss_pred CChHHHHHHHhhcc-CCCcceeeecccCC---CCcEEEEECCCCcccccccCCceeEEeeeeeecccchhHHHHHHHHHH Confidence 99999999999877 33 4444433321 23588888887775 4568888899999999755443 345567888 Q ss_pred HHHHHh--hhhccCCeeeEeeccee------EEeeCCEEEEEEEEEEEEEecCCc Q lcl|NC_010179. 76 EQKLLN--NFTRLDDYATVRNRETT------INQDDETLVMSFDLRVEMYPVEDG 122 (146) Q Consensus 76 ~e~L~~--~~~~i~~~~~i~~~~~~------~~~~d~~L~f~f~~~~~~~~~e~~ 122 (146) ...|.+ .++-..+.+...+.+.+ -.+..|.+.+..++........++ T Consensus 77 s~~L~~id~l~S~NgSf~f~~levt~~P~~~~~D~qG~~~ylld~~v~i~~~~~e 131 (131) T protein:vir:98 77 QNVLDDLGELESADGSFEFEGIDITNTPFINNADNQGWFVFLLDVQAKITVFEEE 131 (131) T ss_pred HHHHHhhcccccCCCCEEEccceecCCCceeeeccCceEEEEEeeEEEEEEEecC Confidence 777753 22222333433333332 346679999999988876543322 No 12 >protein:vir:10368 Length: 118 # NCBI annotation: conserved phage protein # Family: family:all:3244 # MgeID: mge:183 # MgeName: Xp10 # Cross-refs: genbank:acc:NP_858960;genbank:gi:32128425;genbank:GeneID:2648389 Probab=81.30 E-value=0.087 Score=26.40 Aligned_cols=115 Identities=6% Similarity=0.028 Sum_probs=73.4 Q ss_pred ChhHHHHHHHHHHhcCCceeecCccccCCc-CCeEEEEEecccccccccc--EEEEEEEEEEEEeeCCCChhhHHHHHHH Q lcl|NC_010179. 1 MTIVERIAKRISEIFPDVTIYSERQKSGFE-VPSFYISKIMTITKNRFFD--IQDRHLSYSITYFANPDQPNADMEEVEQ 77 (146) Q Consensus 1 ~eI~~aI~~~Lk~~fpd~~IY~e~i~qg~~-~PcFfV~l~~~~~~~~~~~--r~~r~~~~~I~Yfp~~~~~~~~~~~v~e 77 (146) |.+-..|-..|+..+| -.||-.-.++|.. .|+...+.+.......+.+ --.+...++|.=+... ..+..++++ T Consensus 1 Ms~e~~l~a~L~~~~~-~RVyp~~aP~~~~~~Pyiv~q~vsg~p~~~l~G~~~~~~~~rvQIdvyA~t---~~~A~~l~~ 76 (118) T protein:vir:10 1 MSYGRVLKDLLDPVFS-GRVYADIPPDSPPLDAYAIYQRVGGVPVYWQEGGMPEKVNARVQIQIWSRS---KQEAYLATV 76 (118) T ss_pred CchHHHHHHHHhhhcC-CccccccCCCCCCcCCEEEEEecCCcccccccCCCCccceeEEEEEEeeCC---HHHHHHHHH Confidence 9999999999999987 5899999999976 5999999998887777754 2355667788766543 234555555 Q ss_pred HHHhhhhccCCeeeEeecceeEEeeCCEEEEEEEEEEEEEec Q lcl|NC_010179. 78 KLLNNFTRLDDYATVRNRETTINQDDETLVMSFDLRVEMYPV 119 (146) Q Consensus 78 ~L~~~~~~i~~~~~i~~~~~~~~~~d~~L~f~f~~~~~~~~~ 119 (146) .+..++.-......+.+-.-..+...+....++++..+-.-. T Consensus 77 av~~al~~~~~~~~~~~~~d~ye~dt~l~r~~~Df~vw~~~~ 118 (118) T protein:vir:10 77 QVLRLVSEANDMQVLSQPIDDYVREIKLYGSRVDISMWYNLT 118 (118) T ss_pred HHHHHhhhcccceeccCCCccccccCCceEEEEEEEEeeecC Confidence 555444322111011110112233446777888887654333 No 13 >protein:vir:97070 Length: 118 # NCBI annotation: hypothetical protein # Family: family:all:3244 # MgeID: mge:1653 # MgeName: OP1 # Cross-refs: genbank:acc:YP_453569;genbank:gi:84662604;genbank:GeneID:5142485 Probab=79.04 E-value=0.11 Score=25.87 Aligned_cols=114 Identities=6% Similarity=0.034 Sum_probs=72.2 Q ss_pred ChhHHHHHHHHHHhcCCceeecCccccCCc-CCeEEEEEecccccccccc--EEEEEEEEEEEEeeCCCChhhHHHHHHH Q lcl|NC_010179. 1 MTIVERIAKRISEIFPDVTIYSERQKSGFE-VPSFYISKIMTITKNRFFD--IQDRHLSYSITYFANPDQPNADMEEVEQ 77 (146) Q Consensus 1 ~eI~~aI~~~Lk~~fpd~~IY~e~i~qg~~-~PcFfV~l~~~~~~~~~~~--r~~r~~~~~I~Yfp~~~~~~~~~~~v~e 77 (146) |.+-..|-..|+..+| -.||-.-.++|.. .|+...+.+.......+.+ --.+...++|.=+... ..+..++++ T Consensus 1 M~~e~~l~a~L~~~~~-~Rvyp~~aP~~~~~~Pyiv~q~vsg~p~~~ldG~~~~~~~~rvQIdvyA~t---~~~A~~l~~ 76 (118) T protein:vir:97 1 MSYGRMLKDLLDPVFS-GRVYADIPPDSPPLDAYAIYQRVGGVPVYWKEGGMPDKVNARVQVQIWSRS---KQEAYLATV 76 (118) T ss_pred CchHHHHHHHHhhhcC-CccccccCCCCCCcCCEEEEEecCCcccccccCCCCCccceeEEEEEeeCC---HHHHHHHHH Confidence 9999999999999987 7899999999987 6999999999988887844 2356667777766543 234555555 Q ss_pred HHHhhhhccCCeeeEeecce-eEEeeCCEEEEEEEEEEEEEec Q lcl|NC_010179. 78 KLLNNFTRLDDYATVRNRET-TINQDDETLVMSFDLRVEMYPV 119 (146) Q Consensus 78 ~L~~~~~~i~~~~~i~~~~~-~~~~~d~~L~f~f~~~~~~~~~ 119 (146) .+..++.-.... ...+... ..+...+....+++|..+-.-. T Consensus 77 av~~al~~~~~~-~~~~~~~~~ye~dt~lyr~~~Df~iw~~~~ 118 (118) T protein:vir:97 77 QVLRIVSEANDM-QVLSQPIDDYVRELKLYGSRVDISMWYNLT 118 (118) T ss_pred HHHHHhhccccc-ccccCCcccccccCCceEEEEEEEEEeecC Confidence 555544322111 1111111 1223345566667766543222 No 14 >protein:vir:1580 Length: 134 # NCBI annotation: minor capsid protein # Family: family:all:1267 # MgeID: mge:32 # MgeName: phig1e # Cross-refs: genbank:acc:NP_695162;swissprot:trembl:o03934;genbank:gi:23455807;uniprot:O03934;genbank:GeneID:955515 Probab=77.21 E-value=0.13 Score=25.49 Aligned_cols=119 Identities=13% Similarity=0.134 Sum_probs=77.1 Q ss_pred ChhHHHHHHHHHHh--cCCceeecCccccCCcCCeEEEEEeccccc--cccccEEEEEEEEEEEEeeCCC-ChhhHHHHH Q lcl|NC_010179. 1 MTIVERIAKRISEI--FPDVTIYSERQKSGFEVPSFYISKIMTITK--NRFFDIQDRHLSYSITYFANPD-QPNADMEEV 75 (146) Q Consensus 1 ~eI~~aI~~~Lk~~--fpd~~IY~e~i~qg~~~PcFfV~l~~~~~~--~~~~~r~~r~~~~~I~Yfp~~~-~~~~~~~~v 75 (146) |+.++++++.+... +| ++....=... .-++-|...|+++. ..+.+.+.+++.|.|.-=.++. .++.-++.| T Consensus 1 mDf~e~l~~~I~~~~~Lp-~k~~~~yL~~---~~sl~lyp~PGs~~~~ey~dG~~~~sl~fEIa~ktKd~~~a~~~Lw~I 76 (134) T protein:vir:15 1 MDLLERLAASINKVPNLP-MKCTLGYLTA---ADSLSLYPLPGSRVLDEDYAGNQQWQMNYEVGMRTKNQQQANTTLWLV 76 (134) T ss_pred CChHHHHHHHhhcccCCC-ceeeecccCC---CCcEEEEECCCCcccccccCCceeEEeeeeeecccchhHHHHHHHHHH Confidence 99999999999655 55 5544443321 23588888887775 4568888899999999655443 345567888 Q ss_pred HHHHHh-hh---hccCCeeeEeeccee------EEeeCCEEEEEEEEEEEEEecCCcc Q lcl|NC_010179. 76 EQKLLN-NF---TRLDDYATVRNRETT------INQDDETLVMSFDLRVEMYPVEDGG 123 (146) Q Consensus 76 ~e~L~~-~~---~~i~~~~~i~~~~~~------~~~~d~~L~f~f~~~~~~~~~e~~~ 123 (146) ...|.. .+ .-..+.+...+.+.+ -.+..|.+.+..++........+.+ T Consensus 77 s~~Ld~~~~~~l~S~NgSf~f~~levt~~P~~~~~D~qG~~~Ylld~~v~i~~~~~~~ 134 (134) T protein:vir:15 77 SQALDVLTADDLVSSNGSFEFESLTINGQPSISEQDTQGYSTYQLSFSVIVNTFTGAE 134 (134) T ss_pred HHHHhhcCcccceecCCCEEeecceecCCCceeeeccCceEEEEEeeEEEEEEeecCC Confidence 877762 12 222344444444332 3356799999999888765544333 No 15 >protein:vir:10327 Length: 182 # NCBI annotation: ORF29 # Family: family:all:1090 # MgeID: mge:182 # MgeName: VHML # Cross-refs: genbank:acc:NP_758922;genbank:gi:27311196;genbank:GeneID:956141 Probab=52.21 E-value=0.56 Score=21.96 Aligned_cols=145 Identities=12% Similarity=0.107 Sum_probs=77.4 Q ss_pred ChhHHHHHHHHHHhcCCceeec--CccccCCcCCeEEEEEeccccccc-cccEEEEEEEEEEEEeeCCCC--hhhHHHHH Q lcl|NC_010179. 1 MTIVERIAKRISEIFPDVTIYS--ERQKSGFEVPSFYISKIMTITKNR-FFDIQDRHLSYSITYFANPDQ--PNADMEEV 75 (146) Q Consensus 1 ~eI~~aI~~~Lk~~fpd~~IY~--e~i~qg~~~PcFfV~l~~~~~~~~-~~~r~~r~~~~~I~Yfp~~~~--~~~~~~~v 75 (146) -++.+||...|++.||+.++-. +....++..|+.||.+..-..... ..+++.-.+.|..+-...... ...+.... T Consensus 7 ~~lh~AI~~~Lk~~~p~l~~~~~y~~~~~~i~~PAv~vel~~~~~~~d~~tGq~~~~~~~~a~~vv~~~~~~~~~~~~~l 86 (182) T protein:vir:10 7 TEVHEAIKAKLRETFPKVTVDDYNPEPELSVLAPALLLELEEFPMGADVGDDRYPAACRFSVHCVLGWEVKSLALELWEF 86 (182) T ss_pred HHHHHHHHHHHHHhcCCceeeecCccccCccccceeeeeeecCCcCCCCCCCcEEEEEEEEEEEEecccCCCchHHHHHH Confidence 4678899999999999855433 556677999999999998776543 357888778877776654333 33455555 Q ss_pred HHHHHhhhhc---------cC--CeeeEeecceeEEeeCCEEEEEEEEEEEEEe-----cCCccccceeee----eeeee Q lcl|NC_010179. 76 EQKLLNNFTR---------LD--DYATVRNRETTINQDDETLVMSFDLRVEMYP-----VEDGGKLERIEV----NGGLQ 135 (146) Q Consensus 76 ~e~L~~~~~~---------i~--~~~~i~~~~~~~~~~d~~L~f~f~~~~~~~~-----~e~~~~M~~L~~----~g~ik 135 (146) |-.|...+.- ++ ..+......+.-+..||.....+.+.-...- ..+..+-.++-. +.++. T Consensus 87 Aa~l~~~v~~~~wGL~~~~v~~a~~i~a~p~~f~~~~~dgy~vW~VeW~Q~i~LG~s~w~~~g~~p~~v~lg~~P~~~~g 166 (182) T protein:vir:10 87 SAAVAQLIRKSGVWVKGGVLTKPEGLEVYPGSFRKDTQQGYDSRVVTWNQTLYLGESMWNADGITPQEIYLAYAPGGDVP 166 (182) T ss_pred HHHHHHHHhcCcccCCccccCccceeeeccCccChhhcCceEEEEEEEEEEEeeCCcccCCCCCCCceEEEEEcCCCCCC Confidence 5555433211 22 1122222222223346666666665543321 122333333332 11221 Q ss_pred cCCCcccCCCC Q lcl|NC_010179. 136 EDGNRDSDGQN 146 (146) Q Consensus 136 ~~~~~~~~~~~ 146 (146) - +|..+--+. T Consensus 167 ~-~~e~~y~~~ 176 (182) T protein:vir:10 167 P-ADEHEKAEY 176 (182) T ss_pred C-CCcccchhc Confidence 1 122222222 No 16 >protein:vir:4348 Length: 121 # NCBI annotation: Orf15 # Family: family:all:896 # MgeID: mge:93 # MgeName: D3 # Cross-refs: genbank:acc:NP_061511;genbank:gi:9635607;genbank:GeneID:1262874 Probab=49.46 E-value=0.64 Score=21.65 Aligned_cols=111 Identities=14% Similarity=0.203 Sum_probs=67.9 Q ss_pred Ch-----hHH---HHHHHHHHhcCCceeec-CccccCCcCCeEEEEEeccccccccccEEE-EEEEEEEEEeeCCCChhh Q lcl|NC_010179. 1 MT-----IVE---RIAKRISEIFPDVTIYS-ERQKSGFEVPSFYISKIMTITKNRFFDIQD-RHLSYSITYFANPDQPNA 70 (146) Q Consensus 1 ~e-----I~~---aI~~~Lk~~fpd~~IY~-e~i~qg~~~PcFfV~l~~~~~~~~~~~r~~-r~~~~~I~Yfp~~~~~~~ 70 (146) |+ ++. +|...|- .-| ..||- ...+||...|+...+.++......+.++-. ...+++|.=+.+. .. T Consensus 1 m~~~i~~~l~~d~~v~allg-~~~-~Rvyp~~~aP~~~~~Pyiv~q~vsg~p~~~l~g~~~~~~~~vQIDvyA~t---~~ 75 (121) T protein:vir:43 1 MYPPIFKVCSSSPAVTAILG-ASP-LRMYQFGLAPQLVVKPYATWQTISGSPENYLWGRPDADGFTIQVDIFSAT---AA 75 (121) T ss_pred CChHHHHHHhhChhhhhhhc-CCC-ceeeccCCCCCCCcCCeEEEEEecCcccceecCCCCcceeEEEEEeeeCC---HH Confidence 32 111 2222222 223 57885 677999999999999999888888877633 4567777755432 34 Q ss_pred HHHHHHHHHHhhhhccCCeeeEeecceeEEeeCCEEEEEEEEEEEEEe Q lcl|NC_010179. 71 DMEEVEQKLLNNFTRLDDYATVRNRETTINQDDETLVMSFDLRVEMYP 118 (146) Q Consensus 71 ~~~~v~e~L~~~~~~i~~~~~i~~~~~~~~~~d~~L~f~f~~~~~~~~ 118 (146) +..++++.+.++++-... .+....-..+.+-+..+.+|+++.++.. T Consensus 76 ~A~~l~~av~~Al~~~~~--~~~~~~~~ye~dT~lyR~s~Dv~w~~~r 121 (121) T protein:vir:43 76 EARDAAKAIRDAIELSAY--VVRWGGESVDPDTKTYRVSFDVDWIVQR 121 (121) T ss_pred HHHHHHHHHHHHhhhcCC--cccCCCCCCcccccceeeeeEEEEeecC Confidence 667777777777764321 1111112233344678999999977655 No 17 >protein:vir:1892 Length: 121 # NCBI annotation: gp11 # Family: family:all:896 # MgeID: mge:41 # MgeName: HK022 # Cross-refs: genbank:acc:NP_037672;genbank:gi:9634130;genbank:GeneID:1262490 Probab=46.45 E-value=0.73 Score=21.32 Aligned_cols=111 Identities=14% Similarity=0.171 Sum_probs=68.1 Q ss_pred ChhHH------HHHHHHHHhcCCceeec-CccccCCcCCeEEEEEeccccccccccEE-EEEEEEEEEEeeCCCChhhHH Q lcl|NC_010179. 1 MTIVE------RIAKRISEIFPDVTIYS-ERQKSGFEVPSFYISKIMTITKNRFFDIQ-DRHLSYSITYFANPDQPNADM 72 (146) Q Consensus 1 ~eI~~------aI~~~Lk~~fpd~~IY~-e~i~qg~~~PcFfV~l~~~~~~~~~~~r~-~r~~~~~I~Yfp~~~~~~~~~ 72 (146) ..|.. +|...|- .-| ..||- ...+||...|+...+.++.+....+.++= ....+++|.=+... ..++ T Consensus 3 ~~i~~~l~~d~~v~allg-~~~-~Rvyp~~~aP~~~~~Pyiv~q~vsg~p~~~l~G~~~~~~~~vQIDvyA~t---~~~A 77 (121) T protein:vir:18 3 APIFSVCASSPEVTDLLG-SNP-VRIYPFGIQDDNVVYPYVVWQNITGSPENYIAQRPDADFFTLQVDAYADT---VDEV 77 (121) T ss_pred hHHHHHHhcChhhhhhhc-CCC-ceeeeccCCCCcCcCCeEEEEEecCcccceecCCCCcceeEEEEEeecCC---HHHH Confidence 22222 2222222 223 47995 78899999999999999988888887763 34567777756533 3466 Q ss_pred HHHHHHHHhhhhccCCeeeEeecceeEEeeCCEEEEEEEEEEEEEe Q lcl|NC_010179. 73 EEVEQKLLNNFTRLDDYATVRNRETTINQDDETLVMSFDLRVEMYP 118 (146) Q Consensus 73 ~~v~e~L~~~~~~i~~~~~i~~~~~~~~~~d~~L~f~f~~~~~~~~ 118 (146) .++++.+.++++...- ..+-..-..+.+.+..+.+|+.++.... T Consensus 78 ~~l~~avr~Ale~~~~--~~~~~~~~ye~dT~lyR~s~Dv~~~~~r 121 (121) T protein:vir:18 78 IAVATALRDAIEPHAH--ITRWGGQERDPETKRYRYSFDVDWIVTR 121 (121) T ss_pred HHHHHHHHHHhhhcCc--ccCCCCCCCcccccceeeeeEEEEeecC Confidence 7777777777764331 1110011223344678888998887655 No 18 >protein:vir:744 Length: 129 # NCBI annotation: major structural protein 2 # Family: family:all:504 # MgeID: mge:14 # MgeName: Tuc2009 # Cross-refs: genbank:acc:NP_108721;genbank:gi:13487843;genbank:GeneID:920879 Probab=41.53 E-value=0.92 Score=20.77 Aligned_cols=113 Identities=13% Similarity=0.216 Sum_probs=62.5 Q ss_pred ChhHHHHHHHHHHhcCCceeecCccccCCcCCeEEEEEeccccccccccEEEEEEEEEEEEeeCCCChhhHHHHHHHHHH Q lcl|NC_010179. 1 MTIVERIAKRISEIFPDVTIYSERQKSGFEVPSFYISKIMTITKNRFFDIQDRHLSYSITYFANPDQPNADMEEVEQKLL 80 (146) Q Consensus 1 ~eI~~aI~~~Lk~~fpd~~IY~e~i~qg~~~PcFfV~l~~~~~~~~~~~r~~r~~~~~I~Yfp~~~~~~~~~~~v~e~L~ 80 (146) -||-+++-.+|++. ++++|+--..+...-|-+.|.=.... ......-..-++.+.|+=+.. .+...++.+|++++. T Consensus 7 qeL~d~~~~~l~~l--G~~vyD~lP~~~v~YPfV~ig~~~~~-~~~tKt~~~g~v~ltihVW~~-~~~R~~v~~i~~~i~ 82 (129) T protein:vir:74 7 QSIFDELFKRIQAL--GYTVYDYKPMNEVGYPFVELENTQTI-HEANKTDIKGTVSLSLSVWGL-QKKRKEVSDMASNIF 82 (129) T ss_pred HHHHHHHHHHHHhc--CCeeeeccCCCCCCcCEEEeeeeeec-CCccccccccEEEEEEEEeeC-CccchhHHHHHHHHH Confidence 89999999999986 68899954445544455555444333 222334445667777776643 334668889998887 Q ss_pred hhhhcc--CCeee--Eeeccee--EEe---eCC-EEEEEEEEEEEEE Q lcl|NC_010179. 81 NNFTRL--DDYAT--VRNRETT--INQ---DDE-TLVMSFDLRVEMY 117 (146) Q Consensus 81 ~~~~~i--~~~~~--i~~~~~~--~~~---~d~-~L~f~f~~~~~~~ 117 (146) ..+..+ .+++. ++..+.+ +.. .+. .+|-.+++.+..+ T Consensus 83 ~~~~~~~~t~~y~~~~~~~~~~~q~~~Dtst~~~L~Hgvi~l~f~~r 129 (129) T protein:vir:74 83 NQALNISATDGYSWALNSQASTIQMLDDTTTHTPLKRALINLEFRLR 129 (129) T ss_pred HHhccccccCCcEEEEeecceeEEEcccCCCCceeeeEEEEEEEEeC Confidence 655322 13332 3322333 222 122 1444444333322 No 19 >protein:vir:3618 Length: 129 # NCBI annotation: ORF41 # Family: family:all:504 # MgeID: mge:74 # MgeName: TP901-1 # Cross-refs: genbank:acc:NP_112704;genbank:gi:13786572;genbank:GeneID:921070 Probab=37.68 E-value=1.1 Score=20.34 Aligned_cols=113 Identities=15% Similarity=0.243 Sum_probs=62.3 Q ss_pred ChhHHHHHHHHHHhcCCceeecCccccCCcCCeEEEEEeccccccccccEEEEEEEEEEEEeeCCCChhhHHHHHHHHHH Q lcl|NC_010179. 1 MTIVERIAKRISEIFPDVTIYSERQKSGFEVPSFYISKIMTITKNRFFDIQDRHLSYSITYFANPDQPNADMEEVEQKLL 80 (146) Q Consensus 1 ~eI~~aI~~~Lk~~fpd~~IY~e~i~qg~~~PcFfV~l~~~~~~~~~~~r~~r~~~~~I~Yfp~~~~~~~~~~~v~e~L~ 80 (146) -||-+++-.+|++. +++||+--..++..-|-+.|.-.... .........-++.+.|+=+.. .+...++.+|++.+. T Consensus 7 qeL~d~~f~~l~~l--G~~vyD~lP~~~v~YPfV~ig~~~~~-~~~tKt~~~g~v~ltihVW~~-~~~R~~v~~i~~~i~ 82 (129) T protein:vir:36 7 QSIFDELFKRIQAL--GYTVYDYKPMNEVGYPFVELENTQTI-HEANKTDIKGTVSLSLSVWGL-QKKRKEVSDMASNIF 82 (129) T ss_pred HHHHHHHHHHHHhc--CCeeeeccCCCCCCcCEEEeeeeeec-CCccccccccEEEEEEEEEeC-CcCchhHHHHHHHHH Confidence 89999999999986 78999954445554455555444333 222334455667777776654 334567888888886 Q ss_pred hhhhcc--CCeee--EeecceeE--Eee---CCE-EEEEEEEEEEEE Q lcl|NC_010179. 81 NNFTRL--DDYAT--VRNRETTI--NQD---DET-LVMSFDLRVEMY 117 (146) Q Consensus 81 ~~~~~i--~~~~~--i~~~~~~~--~~~---d~~-L~f~f~~~~~~~ 117 (146) ..+..+ .+++. ++..+.++ ..+ +.. +|-.+++.+..+ T Consensus 83 ~~~~~~~~t~~y~~~~~~~~~~~q~~~D~st~~~L~Hgii~l~f~~r 129 (129) T protein:vir:36 83 NQALNISATDGYSWALNSQASTIQMLDDTTTNTPLKRALINLEFRLR 129 (129) T ss_pred HHhcccccCCCeEEEEEeeeeeEEEeccCCCCceeeEEEEEEEEEeC Confidence 655322 13332 23223322 221 111 444444333323 No 20 >protein:vir:107704 Length: 132 # NCBI annotation: hypothetical protein # Family: family:all:5121 # MgeID: mge:1518 # MgeName: T1 # Cross-refs: genbank:acc:YP_003903;genbank:gi:45686319;genbank:GeneID:2773044 Probab=36.68 E-value=1.2 Score=20.23 Aligned_cols=116 Identities=9% Similarity=0.051 Sum_probs=65.4 Q ss_pred ChhHHHHHHHHHHhcCCceeecCccccCCcCCe---EEEEEe--ccc---cccccccE-EEEEEEEEEEEeeCCCChhhH Q lcl|NC_010179. 1 MTIVERIAKRISEIFPDVTIYSERQKSGFEVPS---FYISKI--MTI---TKNRFFDI-QDRHLSYSITYFANPDQPNAD 71 (146) Q Consensus 1 ~eI~~aI~~~Lk~~fpd~~IY~e~i~qg~~~Pc---FfV~l~--~~~---~~~~~~~r-~~r~~~~~I~Yfp~~~~~~~~ 71 (146) -|+..|+.+.|....-+.+|.-+++. |++|. -|+++- +.. .+.....| |.-.++++|+ ||... .... T Consensus 3 yE~~~a~r~~la~~~~~lpVA~eNv~--F~Pp~~G~~yLr~~~lpa~T~~~~L~~d~r~y~Gv~QI~Vv-~paG~-G~~~ 78 (132) T protein:vir:10 3 YELSAAARAAFLSKYRDFPHYMENRN--FTPPKDGGMWLRFNYIEGDTLYLSIDRKCKSYIAIVQIGVV-FPPGS-GVDE 78 (132) T ss_pred hHHHHHHHHHHHhhhcCCcEeecCCC--cCCCCCCceEEEEEEccCCceeeeccCcCcEEEEEEEEEEE-ecCCC-Ccch Confidence 78888888888888888999988864 55432 344432 222 22222222 3345577777 55443 3456 Q ss_pred HHHHHHHHHhhhhcc---CCeeeEeecc--eeEEeeCCEEEEEEEEEEEEEecCC Q lcl|NC_010179. 72 MEEVEQKLLNNFTRL---DDYATVRNRE--TTINQDDETLVMSFDLRVEMYPVED 121 (146) Q Consensus 72 ~~~v~e~L~~~~~~i---~~~~~i~~~~--~~~~~~d~~L~f~f~~~~~~~~~e~ 121 (146) ..++|+.|.+.|..- +.+ ++.+.. .-.+.++-.+.+-+.+.|+..-.+. T Consensus 79 a~~iAd~i~~~F~~g~~l~~G-yi~~~~~~~p~i~~~s~~~iPvrf~yR~Dt~~~ 132 (132) T protein:vir:10 79 ARLKAKEIADFFKDGKMLNVG-YIFEGAIVHQIVKHESGWMIPVRFTVRVDTKET 132 (132) T ss_pred hHHHHHHHHHhccCcceeecc-eecCCCccCCceeCCcceEEEEEEEEEecccCC Confidence 777888887777532 333 333222 2234455566666666666433333 No 21 >protein:vir:2741 Length: 128 # NCBI annotation: hypothetical protein # Family: family:all:504 # MgeID: mge:58 # MgeName: O1205 # Cross-refs: genbank:acc:NP_695114;genbank:gi:23455883;genbank:GeneID:955650 Probab=34.81 E-value=1.3 Score=20.02 Aligned_cols=113 Identities=12% Similarity=0.137 Sum_probs=63.9 Q ss_pred ChhHHHHHHHHHHhcCCceeecCccccCCcCCeEEEEEeccccccccccEEEEEEEEEEEEeeCCCChhhHHHHHHHHHH Q lcl|NC_010179. 1 MTIVERIAKRISEIFPDVTIYSERQKSGFEVPSFYISKIMTITKNRFFDIQDRHLSYSITYFANPDQPNADMEEVEQKLL 80 (146) Q Consensus 1 ~eI~~aI~~~Lk~~fpd~~IY~e~i~qg~~~PcFfV~l~~~~~~~~~~~r~~r~~~~~I~Yfp~~~~~~~~~~~v~e~L~ 80 (146) -+|-+++-.+|++. .++||+---.++..-|-+.|.-.... .......+--++.+.|+=+... +...++.+|+.++. T Consensus 6 qeL~~~lf~~l~~~--g~~vyD~lP~~~~~YPfV~ig~~~~~-~~~tkt~~~g~~~l~i~vW~~~-~~R~~v~~i~~~i~ 81 (128) T protein:vir:27 6 QLLHDEMYRISCEL--GYNTYTYLPPDDAAYPFVVMGETMVL-PQSTKSHLIGRLSSTVHVWGHV-DDRKTLSDMAGQLM 81 (128) T ss_pred HHHHHHHHHHHHhc--CCceeccCCCCCCCcCEEEeccceec-CCccccccccEEEEEEEEEECC-cchhHHHHHHHHHH Confidence 78999999999886 68999954445554455544433322 2223445556677777766543 34678888888887 Q ss_pred hhhh-cc--CCe-e--eEeecceeEEee---CC-EEEEEEEEEEEEE Q lcl|NC_010179. 81 NNFT-RL--DDY-A--TVRNRETTINQD---DE-TLVMSFDLRVEMY 117 (146) Q Consensus 81 ~~~~-~i--~~~-~--~i~~~~~~~~~~---d~-~L~f~f~~~~~~~ 117 (146) ..+. .+ ++. + .+...+..+..+ ++ .+|-.+++.+... T Consensus 82 ~~~~~~~~t~~y~~~~~~~~~~~qil~Dtst~~~l~Hgii~l~f~~~ 128 (128) T protein:vir:27 82 SSFFAIKKIGGKQFSAEVNESSIDSNRDNSTDEVLYHFIIYTYFKFI 128 (128) T ss_pred HHhccccccCCeeEEEEeecceEEEeeecCCCceeeEEEEEEEEEeC Confidence 6542 22 322 2 334444444322 22 2555555444323 No 22 >protein:vir:3972 Length: 129 # NCBI annotation: structural protein # Family: family:all:504 # MgeID: mge:83 # MgeName: ul36 # Cross-refs: genbank:acc:NP_663680;genbank:gi:21716117;genbank:GeneID:951217 Probab=32.76 E-value=1.4 Score=19.78 Aligned_cols=113 Identities=14% Similarity=0.190 Sum_probs=62.3 Q ss_pred ChhHHHHHHHHHHhcCCceeecCccccCCcCCeEEEEEeccccccccccEEEEEEEEEEEEeeCCCChhhHHHHHHHHHH Q lcl|NC_010179. 1 MTIVERIAKRISEIFPDVTIYSERQKSGFEVPSFYISKIMTITKNRFFDIQDRHLSYSITYFANPDQPNADMEEVEQKLL 80 (146) Q Consensus 1 ~eI~~aI~~~Lk~~fpd~~IY~e~i~qg~~~PcFfV~l~~~~~~~~~~~r~~r~~~~~I~Yfp~~~~~~~~~~~v~e~L~ 80 (146) -||-+++-.+|++. +++||+--...+..-|.+.|.-.... ......-..-++.+.|+=+... +...++.+|++.+. T Consensus 7 qeL~d~~f~~l~~l--G~~vyD~lP~~~v~YPfV~ig~~~~~-~~~tKt~~~g~v~ltihVW~~~-~~R~~v~~i~~~i~ 82 (129) T protein:vir:39 7 QSIFDELFKRIQAL--GYTVYDYKQMNEVGYPFVEMENTQTI-HEPNKTDIKGTVSLSLSVWGLQ-KKRKEVSDMASNIF 82 (129) T ss_pred HHHHHHHHHHHHhc--CCeeeeccCCCCCCcCEEEeeeeeec-CCccccccccEEEEEEEEEeCC-cCchhHHHHHHHHH Confidence 89999999999986 78999954445554465555544333 2223344556677777766543 33567888888886 Q ss_pred hhhh-ccC-Ceee----EeecceeEEee---CC-EEEEEEEEEEEEE Q lcl|NC_010179. 81 NNFT-RLD-DYAT----VRNRETTINQD---DE-TLVMSFDLRVEMY 117 (146) Q Consensus 81 ~~~~-~i~-~~~~----i~~~~~~~~~~---d~-~L~f~f~~~~~~~ 117 (146) ..+. .+. +++. +...+..+..+ +. .+|-.+++.+..+ T Consensus 83 ~~~~~~~~t~~y~~~~~~~~~~~q~~~Dts~~~~L~Hgvi~l~f~~r 129 (129) T protein:vir:39 83 NQALNISATDGYSWALNLQASTIQMMDDTTTGTPLKRAFINLEFRLR 129 (129) T ss_pred HHhcccccCCCeeEEEeecceeEEEecccCCCceeeeEEEEEEEEeC Confidence 5432 221 3222 33333333321 22 1444444333323 No 23 >protein:vir:1438 Length: 115 # NCBI annotation: hypothetical protein # Family: family:all:2712 # MgeID: mge:30 # MgeName: phiE125 # Cross-refs: genbank:acc:NP_536367;genbank:gi:17975172;genbank:GeneID:929144 Probab=32.09 E-value=1.4 Score=19.70 Aligned_cols=111 Identities=17% Similarity=0.250 Sum_probs=66.5 Q ss_pred ChhHHHHHHHHHHhcCCceeecCccccCCcCCeEEEEEeccccccccccEEE-EEEEEEEEEeeCCCChhhHHHHHHHHH Q lcl|NC_010179. 1 MTIVERIAKRISEIFPDVTIYSERQKSGFEVPSFYISKIMTITKNRFFDIQD-RHLSYSITYFANPDQPNADMEEVEQKL 79 (146) Q Consensus 1 ~eI~~aI~~~Lk~~fpd~~IY~e~i~qg~~~PcFfV~l~~~~~~~~~~~r~~-r~~~~~I~Yfp~~~~~~~~~~~v~e~L 79 (146) |-++ -|..+|....| -.||-...+||-..|+..-+.+.......+.++-. ....++|.=+... ..+..++++.. T Consensus 1 ~~~~-~i~~aL~~l~~-~RVyp~~aP~~~~~Pyiv~q~vsg~p~~~L~G~~~~~~~~vQIDvyA~t---~~~A~~l~~~v 75 (115) T protein:vir:14 1 MSVI-VIRDALQGIGG-AKGYLGVAPAKAPAPYFVVTRVHGALDMALAGLTGGRSGSYQIDCYAPT---FTDADRLADLA 75 (115) T ss_pred CeeE-eeehhhccccc-cccccccCCCCCCCCEEEEEeecCcccccccCCCCCcceEEEEEEeeCC---HHHHHHHHHHH Confidence 3222 23445566666 68888999999999999999998888877765544 5667777756433 23445555554 Q ss_pred HhhhhccCCeeeEee---cceeEEeeCCEEEEEEEEEEEE Q lcl|NC_010179. 80 LNNFTRLDDYATVRN---RETTINQDDETLVMSFDLRVEM 116 (146) Q Consensus 80 ~~~~~~i~~~~~i~~---~~~~~~~~d~~L~f~f~~~~~~ 116 (146) .+.+.-......+.+ ..-..+...+....++|+..+- T Consensus 76 ~~~~~~~~~~~~~~~~~~~~d~ye~dt~lyR~s~D~~vWf 115 (115) T protein:vir:14 76 VDRAMSVQDRFSVGGVDELPDDYSEDTGLFRISLELSVEF 115 (115) T ss_pred HHHHhcCccceeeeeecCCCCCCcccccceeeEEEEEEeC Confidence 443333222222211 1112334456788888888654 No 24 >protein:vir:1029 Length: 131 # NCBI annotation: Orf49 # Family: family:all:1192 # MgeID: mge:20 # MgeName: bIL286 # Cross-refs: genbank:acc:NP_076683;genbank:gi:13095792;genbank:GeneID:920337 Probab=30.63 E-value=1.6 Score=19.52 Aligned_cols=120 Identities=11% Similarity=0.056 Sum_probs=58.2 Q ss_pred ChhHHHHH-HHHHHhcCCc-eeecCccccCCcCCe----EEEEEeccccccccccEEE-EEEEEEEE-EeeCCCChhhHH Q lcl|NC_010179. 1 MTIVERIA-KRISEIFPDV-TIYSERQKSGFEVPS----FYISKIMTITKNRFFDIQD-RHLSYSIT-YFANPDQPNADM 72 (146) Q Consensus 1 ~eI~~aI~-~~Lk~~fpd~-~IY~e~i~qg~~~Pc----FfV~l~~~~~~~~~~~r~~-r~~~~~I~-Yfp~~~~~~~~~ 72 (146) |..---.+ ..|+...+.+ .+|...|+++...+. ..|.=...+.....+++++ ....+.|+ +|....+.+.++ T Consensus 1 M~~pv~~v~~Li~~~~~~~D~vy~~~Ip~e~~~~td~T~vLiTe~~~~~~~ygnn~f~~~~~~VEIQIFYk~~~d~~~d~ 80 (131) T protein:vir:10 1 MKRPVEIVQDIIAASDFPHDEIFLDSIPSEKLDSSNETQVLLTESDNGPSDYGNSDFISLMYGVYIQIFYSNAEDSGINI 80 (131) T ss_pred CcchHHHHHHHHhccCCChhheeeccCCcccccCCceEEEEEecccCCcccccCcceeeeeEEEEEEEEeeccCCCCCCH Confidence 44333222 2233333333 699999999885554 2233233344444444444 66677777 343333345566 Q ss_pred HHHHHHHHhhhhccCCeeeEeecceeEEeeC-CE--EEEEEEEEEEEEecCCc Q lcl|NC_010179. 73 EEVEQKLLNNFTRLDDYATVRNRETTINQDD-ET--LVMSFDLRVEMYPVEDG 122 (146) Q Consensus 73 ~~v~e~L~~~~~~i~~~~~i~~~~~~~~~~d-~~--L~f~f~~~~~~~~~e~~ 122 (146) .+-+-.|+..|.--+ -.+...+.+..|-| +. -.|.|.-.+.+.+.+.. T Consensus 81 ~~~Ei~L~~~f~~~g--W~i~~s~~h~~DPdT~Q~t~t~y~~k~~~~~~~~~~ 131 (131) T protein:vir:10 81 VQSEINLMKSFINND--WLIAQSKSHYIDPDTGQIIKNLTVQRIMTLSEIANS 131 (131) T ss_pred HHHHHHHHHHHhcCC--ceEEcCCCCcCCCCCCeEEEEEEEEEeeeeccccCC Confidence 666666776665443 33333333333322 33 33444444444444443 No 25 >protein:vir:3995 Length: 131 # NCBI annotation: unknown # Family: family:all:1192 # MgeID: mge:319 # MgeName: BK5-T # Cross-refs: genbank:acc:NP_116503;genbank:gi:14251136;genbank:GeneID:921308 Probab=30.60 E-value=1.6 Score=19.52 Aligned_cols=120 Identities=11% Similarity=0.060 Sum_probs=58.3 Q ss_pred ChhHHHHH-HHHHHhcCCc-eeecCccccCCcCCe----EEEEEeccccccccccEEE-EEEEEEEE-EeeCCCChhhHH Q lcl|NC_010179. 1 MTIVERIA-KRISEIFPDV-TIYSERQKSGFEVPS----FYISKIMTITKNRFFDIQD-RHLSYSIT-YFANPDQPNADM 72 (146) Q Consensus 1 ~eI~~aI~-~~Lk~~fpd~-~IY~e~i~qg~~~Pc----FfV~l~~~~~~~~~~~r~~-r~~~~~I~-Yfp~~~~~~~~~ 72 (146) |..---.+ ..|+...+.+ .+|...|+++...+. ..|.=...+.....+++++ ....+.|+ +|....+.+.++ T Consensus 1 M~~pv~~v~~Li~~~~~~~D~vy~~~Ip~e~~~~td~T~vLiTe~~~~~~~ygnn~f~~~~~~VEIQIFYk~~~d~~~d~ 80 (131) T protein:vir:39 1 MKRPVEIVQDIIAASDFPHDEIFLDSIPSEKLDSSNETQVLLTESDNGPSDYGNSEFVSLLYGVYIQIFYSNAEDSGINI 80 (131) T ss_pred CcchHHHHHHHHhccCCChhheeeccCCcccccCCceEEEEEecccCCcccccCcceeeeeEEEEEEEEeeccCCCCCCH Confidence 44333222 2233333333 699999999885554 2233233344444444444 66677777 343333345566 Q ss_pred HHHHHHHHhhhhccCCeeeEeecceeEEeeC-CE--EEEEEEEEEEEEecCCc Q lcl|NC_010179. 73 EEVEQKLLNNFTRLDDYATVRNRETTINQDD-ET--LVMSFDLRVEMYPVEDG 122 (146) Q Consensus 73 ~~v~e~L~~~~~~i~~~~~i~~~~~~~~~~d-~~--L~f~f~~~~~~~~~e~~ 122 (146) .+-+-.|+..|.--+ -.+...+.+..|-| +. -.|.|.-.+.+.+.+.. T Consensus 81 ~~~Ei~L~~~f~~~g--W~i~~s~~h~~DPdT~Q~t~t~y~~k~~~~~~~~~~ 131 (131) T protein:vir:39 81 VQSEINLMKSFINND--WLIAQSKSHYIDPDTGQIIKNLTVQRIMTLSEIANS 131 (131) T ss_pred HHHHHHHHHHHhcCC--ceEEcCCCCcCCCCCCeEEEEEEEEEeeeeccccCC Confidence 666666776665443 33333333333322 33 33444444444444443 No 26 >protein:vir:100116 Length: 115 # NCBI annotation: gp10 # Family: family:all:2712 # MgeID: mge:1639 # MgeName: phi1026b # Cross-refs: genbank:acc:NP_945040;genbank:gi:38707900;genbank:GeneID:2744163 Probab=29.07 E-value=1.7 Score=19.33 Aligned_cols=111 Identities=17% Similarity=0.247 Sum_probs=66.3 Q ss_pred ChhHHHHHHHHHHhcCCceeecCccccCCcCCeEEEEEeccccccccccEEE-EEEEEEEEEeeCCCChhhHHHHHHHHH Q lcl|NC_010179. 1 MTIVERIAKRISEIFPDVTIYSERQKSGFEVPSFYISKIMTITKNRFFDIQD-RHLSYSITYFANPDQPNADMEEVEQKL 79 (146) Q Consensus 1 ~eI~~aI~~~Lk~~fpd~~IY~e~i~qg~~~PcFfV~l~~~~~~~~~~~r~~-r~~~~~I~Yfp~~~~~~~~~~~v~e~L 79 (146) |-.+ -|..+|....| ..||-.-.+||-..|+..-+.+.......+.++-. ....++|.=+... ..+..++++.. T Consensus 1 ~~~~-~i~~aL~~l~~-~RVyp~~aP~~~~~Pyiv~q~vsg~p~~~L~G~~~~~~~~vQIDvyA~t---~~~A~~l~~~v 75 (115) T protein:vir:10 1 MSVI-VIRDALQGIGG-AKGYLGVAPEKAPAPYFVVTRVHGALDMALAGLTGGRSGSYQIDCYAPT---FTDADRLADLA 75 (115) T ss_pred CeeE-EeehhhcccCC-ceeecccCCCCCCCCEEEEEeecCccccccCCCCCCcceEEEEEEeeCC---HHHHHHHHHHH Confidence 3322 23445556655 68888889999999999999998888877766544 5667777755433 23445555555 Q ss_pred HhhhhccCCeeeEee---cceeEEeeCCEEEEEEEEEEEE Q lcl|NC_010179. 80 LNNFTRLDDYATVRN---RETTINQDDETLVMSFDLRVEM 116 (146) Q Consensus 80 ~~~~~~i~~~~~i~~---~~~~~~~~d~~L~f~f~~~~~~ 116 (146) .+.+.-......+.+ ..-..+...+....++|+..+- T Consensus 76 ~~~~~~~~~~~~~~~~~~~~d~ye~dt~lyR~s~D~~vWf 115 (115) T protein:vir:10 76 VDRAMSVQDRFSVGGVDELPDDYSEDTGLFRISLELSVEF 115 (115) T ss_pred HHHHhcCccceeEeeecCCCCCCcccccceeeEEEEEEeC Confidence 443333222222211 1112334456788888888654 No 27 >protein:vir:9824 Length: 132 # NCBI annotation: putative minor capsid protein # Family: family:all:1267 # MgeID: mge:176 # MgeName: 315.4 # Cross-refs: genbank:acc:NP_795586;genbank:gi:28876335;genbank:GeneID:1257908 Probab=28.03 E-value=1.8 Score=19.20 Aligned_cols=117 Identities=9% Similarity=0.020 Sum_probs=72.0 Q ss_pred ChhHHHHHHHHHHhcCCce--eecCccccCCcCCeEEEEEeccccc--cccccEEEEEEEEEEEEeeCCC-ChhhHHHHH Q lcl|NC_010179. 1 MTIVERIAKRISEIFPDVT--IYSERQKSGFEVPSFYISKIMTITK--NRFFDIQDRHLSYSITYFANPD-QPNADMEEV 75 (146) Q Consensus 1 ~eI~~aI~~~Lk~~fpd~~--IY~e~i~qg~~~PcFfV~l~~~~~~--~~~~~r~~r~~~~~I~Yfp~~~-~~~~~~~~v 75 (146) .+.++++++.++.. +.| ...+=.. ..-++-|...|+++. -.+.+.+.+.+.|.|..=.++. .++.-++.| T Consensus 3 ~Df~e~L~~~In~l--~LP~k~~~~yL~---~~esl~iyp~PGs~v~~ey~dG~~e~~l~feIa~ktK~~~~a~~tLw~I 77 (132) T protein:vir:98 3 NDFATVLRQFVEGL--DLGIKPRLDYLT---RQEDLAIYPMPGGKVNNEYMDGTREISLPFEIAIKTKNQELASTVMWTI 77 (132) T ss_pred hhHHHHHHHHhccc--CCCceeeecccC---CCccEEEeecCCCcccccccCceeEEEEeeEeeccccchhHHHHHHHHH Confidence 67777787777654 443 2222221 123688888887776 4568899999999999765543 345567888 Q ss_pred HHHHHhh-hhccC--C-----eeeEeecceeEEeeCCEEEEEEEEEEEEEecCCc Q lcl|NC_010179. 76 EQKLLNN-FTRLD--D-----YATVRNRETTINQDDETLVMSFDLRVEMYPVEDG 122 (146) Q Consensus 76 ~e~L~~~-~~~i~--~-----~~~i~~~~~~~~~~d~~L~f~f~~~~~~~~~e~~ 122 (146) ...|... +..+. + ++.|..--+.-.+..|.+.+.+++.......-+. T Consensus 78 s~~Ld~~~~~l~S~n~Sf~F~~lev~~P~i~~~D~QG~~iYlld~~v~i~ie~~~ 132 (132) T protein:vir:98 78 NSALSNFDLKLPSLNHSYTFISLDVEKPFLNDLSDQGFYIYVLDITAHLEIEGNN 132 (132) T ss_pred HHHHhhcCCcCcccCCcEEecceeeccceeeeeecCceEEEEEEEEEEEEEeeCC Confidence 7777643 23332 2 2444322222335678899988888776543322 No 28 >protein:vir:3037 Length: 132 # NCBI annotation: minor capsid protein # Family: family:all:1267 # MgeID: mge:61 # MgeName: PhiNIH1.1 # Cross-refs: genbank:acc:NP_438150;genbank:gi:16271813;genbank:GeneID:929243 Probab=28.03 E-value=1.8 Score=19.20 Aligned_cols=117 Identities=9% Similarity=0.020 Sum_probs=72.0 Q ss_pred ChhHHHHHHHHHHhcCCce--eecCccccCCcCCeEEEEEeccccc--cccccEEEEEEEEEEEEeeCCC-ChhhHHHHH Q lcl|NC_010179. 1 MTIVERIAKRISEIFPDVT--IYSERQKSGFEVPSFYISKIMTITK--NRFFDIQDRHLSYSITYFANPD-QPNADMEEV 75 (146) Q Consensus 1 ~eI~~aI~~~Lk~~fpd~~--IY~e~i~qg~~~PcFfV~l~~~~~~--~~~~~r~~r~~~~~I~Yfp~~~-~~~~~~~~v 75 (146) .+.++++++.++.. +.| ...+=.. ..-++-|...|+++. -.+.+.+.+.+.|.|..=.++. .++.-++.| T Consensus 3 ~Df~e~L~~~In~l--~LP~k~~~~yL~---~~esl~iyp~PGs~v~~ey~dG~~e~~l~feIa~ktK~~~~a~~tLw~I 77 (132) T protein:vir:30 3 NDFATVLRQFVEGL--DLGIKPRLDYLT---RQEDLAIYPMPGGKVNNEYMDGTREISLPFEIAIKTKNQELASTVMWTI 77 (132) T ss_pred hhHHHHHHHHhccc--CCCceeeecccC---CCccEEEeecCCCcccccccCceeEEEEeeEeeccccchhHHHHHHHHH Confidence 67777787777654 443 2222221 123688888887776 4568899999999999765543 345567888 Q ss_pred HHHHHhh-hhccC--C-----eeeEeecceeEEeeCCEEEEEEEEEEEEEecCCc Q lcl|NC_010179. 76 EQKLLNN-FTRLD--D-----YATVRNRETTINQDDETLVMSFDLRVEMYPVEDG 122 (146) Q Consensus 76 ~e~L~~~-~~~i~--~-----~~~i~~~~~~~~~~d~~L~f~f~~~~~~~~~e~~ 122 (146) ...|... +..+. + ++.|..--+.-.+..|.+.+.+++.......-+. T Consensus 78 s~~Ld~~~~~l~S~n~Sf~F~~lev~~P~i~~~D~QG~~iYlld~~v~i~ie~~~ 132 (132) T protein:vir:30 78 NSALSNFDLKLPSLNHSYTFISLDVEKPFLNDLSDQGFYIYVLDITAHLEIEGNN 132 (132) T ss_pred HHHHhhcCCcCcccCCcEEecceeeccceeeeeecCceEEEEEEEEEEEEEeeCC Confidence 7777643 23332 2 2444322222335678899988888776543322 No 29 >protein:vir:100200 Length: 123 # NCBI annotation: putative tail component # Family: family:all:1192 # MgeID: mge:1524 # MgeName: phi AT3 # Cross-refs: genbank:acc:YP_025035;genbank:gi:48697268;genbank:GeneID:2948298 Probab=27.25 E-value=1.9 Score=19.10 Aligned_cols=115 Identities=12% Similarity=0.045 Sum_probs=57.9 Q ss_pred ChhHHHHHHHH-HHhcCC-ceeecCccccCCcCCe--EEEEEe--cccccccc-ccEEEEEEEEEEEEeeCCCChhhHHH Q lcl|NC_010179. 1 MTIVERIAKRI-SEIFPD-VTIYSERQKSGFEVPS--FYISKI--MTITKNRF-FDIQDRHLSYSITYFANPDQPNADME 73 (146) Q Consensus 1 ~eI~~aI~~~L-k~~fpd-~~IY~e~i~qg~~~Pc--FfV~l~--~~~~~~~~-~~r~~r~~~~~I~Yfp~~~~~~~~~~ 73 (146) |--..-+.+.| +..||. =.||...++++..... =.|-+. ..+..-.. +........++|+-|=+.+ ...+++ T Consensus 1 M~~v~~v~~ll~~~~~~~iD~vy~~~Ip~e~~~~~~~T~vLiTe~~~~~~~ygnn~f~~~~~~VeIQIfY~~~-~~~d~~ 79 (123) T protein:vir:10 1 MSAVDDAVTVLNQAHIAGIDAIYGNNLPKSELDNVNKTVVLVTDSADDPPSFGNNDFWSLNQEVELQIWYAQL-LDSDTE 79 (123) T ss_pred CCcHHHHHHHHHhcCCCccceeeecCCCcccccCCceeEEEEeccCCCcccccCCceeeeEEEEEEEEEeccC-CCCCHH Confidence 44444444444 466773 2789999988663222 222222 22333333 3334466778887443332 224677 Q ss_pred HHHHHHHhhhhccCCeeeEeecceeEEeeC-CEEEEEEEEEEEEEe Q lcl|NC_010179. 74 EVEQKLLNNFTRLDDYATVRNRETTINQDD-ETLVMSFDLRVEMYP 118 (146) Q Consensus 74 ~v~e~L~~~~~~i~~~~~i~~~~~~~~~~d-~~L~f~f~~~~~~~~ 118 (146) +..-.|+..|.-- +..+.....+..|.| +.+.-+|.+...... T Consensus 80 ~~E~~L~~~f~~~--~W~i~~s~~h~~DPdT~Q~~~t~~~~k~~~i 123 (123) T protein:vir:10 80 AIEIAMMKAFTHQ--HWQVAAVRQRTLDPDTQQLFNTFYFSRTKNI 123 (123) T ss_pred HHHHHHHHHHhcC--CcEEEecCCCcCCCCCCeEEEEEEEEeeecC Confidence 7777787777543 344444333333332 455555555443222 No 30 >protein:vir:4907 Length: 128 # NCBI annotation: gp128 # Family: family:all:504 # MgeID: mge:107 # MgeName: Sfi11 # Cross-refs: genbank:acc:NP_056685;genbank:gi:9635020;genbank:GeneID:1262660 Probab=25.55 E-value=2 Score=18.88 Aligned_cols=113 Identities=10% Similarity=0.146 Sum_probs=64.3 Q ss_pred ChhHHHHHHHHHHhcCCceeecCccccCCcCCeEEEEEeccccccccccEEEEEEEEEEEEeeCCCChhhHHHHHHHHHH Q lcl|NC_010179. 1 MTIVERIAKRISEIFPDVTIYSERQKSGFEVPSFYISKIMTITKNRFFDIQDRHLSYSITYFANPDQPNADMEEVEQKLL 80 (146) Q Consensus 1 ~eI~~aI~~~Lk~~fpd~~IY~e~i~qg~~~PcFfV~l~~~~~~~~~~~r~~r~~~~~I~Yfp~~~~~~~~~~~v~e~L~ 80 (146) -+|-+++-.+|++. .++||+---..+..=|.+.|.=.... .......+.-++.+.|+=+.. .+...+..+|+.++. T Consensus 6 q~L~~~~f~~l~~~--g~~vyD~lP~~~v~YPfV~ig~~~~~-~~~tKt~~~g~v~ltihVW~~-~~~R~ev~~i~~~i~ 81 (128) T protein:vir:49 6 QLLHDEMYRISCEL--GYNTYTYLPPDDAAYPFVVMGETMVL-PQSTKSHLIGRLSSTVHVWGR-VDDRKTLSDMAGQLM 81 (128) T ss_pred HHHHHHHHHHHHhc--CCceecccCCCCCCCCEEEeeeeeec-CCccccccccEEEEEEEEEeC-CCCchhHHHHHHHHH Confidence 78999999999876 58899954444454455555444333 222344555677788886654 344678888888887 Q ss_pred hhh---hccCCe-e--eEeecceeEEe---eCC-EEEEEEEEEEEEE Q lcl|NC_010179. 81 NNF---TRLDDY-A--TVRNRETTINQ---DDE-TLVMSFDLRVEMY 117 (146) Q Consensus 81 ~~~---~~i~~~-~--~i~~~~~~~~~---~d~-~L~f~f~~~~~~~ 117 (146) ..+ ..+++. + .+...+..+.. +++ .+|-.+.+.|... T Consensus 82 ~~l~~~~~t~~y~f~~~i~~s~~~~~~D~st~~~L~Hgvl~l~f~~~ 128 (128) T protein:vir:49 82 SSFFAIKNIGGKQFSAEINQSSIDSNRDNSTDEVLYHFVIYTYFKFV 128 (128) T ss_pred HHhhcccccCCeEEEEEeccceEEEEeecCCCcceeeEEEEEEEEeC Confidence 644 223332 2 34444444332 222 2455554444322 No 31 >protein:vir:96485 Length: 128 # NCBI annotation: hypothetical protein # Family: family:all:504 # MgeID: mge:1620 # MgeName: 2972 # Cross-refs: genbank:acc:YP_238497;genbank:gi:66391773;genbank:GeneID:5176907 Probab=24.98 E-value=2.1 Score=18.80 Aligned_cols=113 Identities=13% Similarity=0.189 Sum_probs=64.5 Q ss_pred ChhHHHHHHHHHHhcCCceeecCccccCCcCCeEEEEEeccccccccccEEEEEEEEEEEEeeCCCChhhHHHHHHHHHH Q lcl|NC_010179. 1 MTIVERIAKRISEIFPDVTIYSERQKSGFEVPSFYISKIMTITKNRFFDIQDRHLSYSITYFANPDQPNADMEEVEQKLL 80 (146) Q Consensus 1 ~eI~~aI~~~Lk~~fpd~~IY~e~i~qg~~~PcFfV~l~~~~~~~~~~~r~~r~~~~~I~Yfp~~~~~~~~~~~v~e~L~ 80 (146) -+|-+++-.+|++. +++||+--...+..-|-+.|.-.... ....+.-..-++.+.|+=+.. .+...+..+|+.++. T Consensus 6 qeL~d~~f~~l~~~--g~~vyd~lP~~~v~YPfV~ig~~~~~-~~~tKt~~~g~v~ltihVW~~-~~~R~~v~~i~~~i~ 81 (128) T protein:vir:96 6 QLLHDEMYRISSGL--GYDTYTYLPPEGAAYPFVVMGETMVL-PQSTKSHLIGRLSSTVHVWGR-VDDRKTLSDMAGQLM 81 (128) T ss_pred HHHHHHHHHHHHhc--CCeeecccCCCCCCCCEEEEeeeeec-CCccccccccEEEEEEEEEEC-CCCchhHHHHHHHHH Confidence 89999999999986 68899954445555565555533333 222334455667777776654 334567888888886 Q ss_pred hhh---hccCCe-e--eEeecceeEEee---CC-EEEEEEEEEEEEE Q lcl|NC_010179. 81 NNF---TRLDDY-A--TVRNRETTINQD---DE-TLVMSFDLRVEMY 117 (146) Q Consensus 81 ~~~---~~i~~~-~--~i~~~~~~~~~~---d~-~L~f~f~~~~~~~ 117 (146) ..+ ..+++. + .+...+.++..+ +. .+|-.+++.+... T Consensus 82 ~~l~~~~~t~~y~~~~~~~~~~~qii~D~st~~~l~Hgil~l~f~~~ 128 (128) T protein:vir:96 82 SSFFTIKNIDGMQFSAEVNESSIDSNRDNSTDEVLYHFIIYTYFKFI 128 (128) T ss_pred HHhhhhhccCCeEEEEEEeeeeEEEeeecCCCceeeEEEEEEEEEeC Confidence 654 222332 2 233444444322 21 2555555544333 No 32 >protein:vir:1387 Length: 116 # NCBI annotation: Gp10 protein # Family: family:all:517 # MgeID: mge:314 # MgeName: phi3626 # Cross-refs: genbank:acc:NP_612839;genbank:gi:20065973;genbank:GeneID:935788 Probab=22.71 E-value=2.4 Score=18.49 Aligned_cols=110 Identities=7% Similarity=0.083 Sum_probs=56.6 Q ss_pred ChhHHHHHHHHHHhcCCceeecCccccCCcCCeEEEEEecccccccc-ccEEEEEEEEEEEEeeCCCChhhHHHHHHHHH Q lcl|NC_010179. 1 MTIVERIAKRISEIFPDVTIYSERQKSGFEVPSFYISKIMTITKNRF-FDIQDRHLSYSITYFANPDQPNADMEEVEQKL 79 (146) Q Consensus 1 ~eI~~aI~~~Lk~~fpd~~IY~e~i~qg~~~PcFfV~l~~~~~~~~~-~~r~~r~~~~~I~Yfp~~~~~~~~~~~v~e~L 79 (146) |.|..-|.++|+.+ ++||+..--.+..+.|..-+...+....... +.-....+.++|.=|.++...-.++..-.++| T Consensus 4 m~I~~~i~~~Lk~i--~ipV~~~~y~~~~~~~~Itf~~y~e~~~~yaDd~e~~t~~~iQVDI~sk~~~~~~~l~~~V~~l 81 (116) T protein:vir:13 4 FDIIALVYECLECL--NVPVIEGWYDEELNKTHITVHEYLEQDESFEDDEAREEEHNIQIDVWSKDSLEAFKLKKAIKKL 81 (116) T ss_pred cchhHHHHHHHhhc--CCeeeecccCCCCccceEEEEeeecCCCcccCCeeeeEEEEEEEEEeecCCccHHHHHHHHHHH Confidence 99999999999988 7998887766656667332222333333333 44455677888887865432211344444444 Q ss_pred Hh--hhhccCCeeeEeecceeEEeeCCEEEEEEEEEEEEEec Q lcl|NC_010179. 80 LN--NFTRLDDYATVRNRETTINQDDETLVMSFDLRVEMYPV 119 (146) Q Consensus 80 ~~--~~~~i~~~~~i~~~~~~~~~~d~~L~f~f~~~~~~~~~ 119 (146) +. +|...+. .+ ..+.+-+.+|--+.|.+....- T Consensus 82 Mk~~GF~r~~~------~d-~ye~dt~iyhk~~RF~y~~el~ 116 (116) T protein:vir:13 82 LKKNNFYFDSS------ED-FYETKTRIYHKGLRFSYISEIS 116 (116) T ss_pred HHHcCCEeeec------CC-CccchhhhhhhhhhheeeeecC Confidence 32 3333321 11 1222223344333333322111 No 33 >protein:vir:104348 Length: 129 # NCBI annotation: hypothetical protein # Family: family:all:5121 # MgeID: mge:1593 # MgeName: RTP # Cross-refs: genbank:acc:YP_398976;genbank:gi:81343960;genbank:GeneID:3778880 Probab=20.42 E-value=2.8 Score=18.15 Aligned_cols=112 Identities=10% Similarity=0.078 Sum_probs=63.3 Q ss_pred ChhHHHHHHHHHHhcC-CceeecCccccCCcC---CeEEEEEe-----cccccccc-ccEEEEEEEEEEEEeeCCCChhh Q lcl|NC_010179. 1 MTIVERIAKRISEIFP-DVTIYSERQKSGFEV---PSFYISKI-----MTITKNRF-FDIQDRHLSYSITYFANPDQPNA 70 (146) Q Consensus 1 ~eI~~aI~~~Lk~~fp-d~~IY~e~i~qg~~~---PcFfV~l~-----~~~~~~~~-~~r~~r~~~~~I~Yfp~~~~~~~ 70 (146) +.-+..|..++.+.++ +.||.-|++. |++ +.-|+++- ..+.+... .+.|.-.++++|+ ||... ... T Consensus 3 ~aar~~v~d~~~~~~~~~lpVA~eNv~--FtPp~~G~~YLr~~~lpa~T~~~~L~~d~r~y~Gv~QI~Vv-~p~G~-G~~ 78 (129) T protein:vir:10 3 LAARKFVNDLLVNEFPVRYPVAWENAA--FTPPADGSIWLKYDYTEVDTVTYGLSRKCKYYVGMVQISVF-FSPGT-GID 78 (129) T ss_pred hHHHHHHHHHHHHhhcCCCcEeecCCC--cCCCCCCceEEEEEecCCCceeeeccCCCceEEEEEEEEEE-ecCCC-Ccc Confidence 7778889999999998 4799988864 543 23454443 22222222 3445556677777 55433 345 Q ss_pred HHHHHHHHHHhhhhcc---CCeeeEee--cceeEEeeCCEEEEEEEEEEEEE Q lcl|NC_010179. 71 DMEEVEQKLLNNFTRL---DDYATVRN--RETTINQDDETLVMSFDLRVEMY 117 (146) Q Consensus 71 ~~~~v~e~L~~~~~~i---~~~~~i~~--~~~~~~~~d~~L~f~f~~~~~~~ 117 (146) +...+|+.|.+.|..- +.+ .|.+ ...-.+.++--..+=+.+.|+.. T Consensus 79 ~a~~iA~ei~d~F~~g~~L~~G-yi~~~~~~~p~i~~~~~~~ipvr~~~r~d 129 (129) T protein:vir:10 79 KPRQIANQLAESIVDGTMLDSG-TIYESGVVNPVIKSKSGWFIPVRFYVRLD 129 (129) T ss_pred hhhHHHHHHHHhccCCceeece-eecCCCeECCeeecCCceEEeEEEEEEeC Confidence 6788888888877532 333 3332 22233344444444444444433 Done!