Query lcl|Aclame:protein:vir:80779|NCBI_annot:putative tail sheath protein|genbank:acc:YP_001504132;genbank:gi:158079319;genbank:GeneID:5666428 Match_columns 569 No_of_seqs 212 out of 364 Neff 8.3 Searched_HMMs 1612 Date Tue Dec 3 00:21:48 2013 Command /home/guerois/workspace/virfam/python/lib/hhsearch//hhsearch2 -i .//seq/seq_85 -d /home/guerois/workspace/virfam/python/profile_database/capsid_neck_tail.hhm -glob -cpu 7 -o .//seq/HHR/seq_85_vs_rec_db.hhr No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM 1 protein:vir:80488 Length: 562 100.0 6E-155 4E-158 865.9 59.2 562 1-569 1-562 (562) 2 protein:vir:99306 Length: 587 100.0 4E-155 3E-158 867.0 57.9 562 1-569 1-587 (587) 3 protein:vir:63742 Length: 562 100.0 4E-155 3E-158 866.8 57.8 562 1-569 1-562 (562) 4 protein:vir:80779 Length: 569 100.0 6E-155 4E-158 866.1 58.4 569 1-569 1-569 (569) 5 protein:vir:95741 Length: 587 100.0 2E-154 1E-157 862.9 56.9 562 1-569 1-587 (587) 6 protein:vir:96586 Length: 587 100.0 2E-148 1E-151 830.7 57.1 562 1-569 1-587 (587) 7 protein:vir:100829 Length: 607 100.0 7E-143 4E-146 800.0 54.0 564 1-569 1-601 (607) 8 protein:vir:102819 Length: 648 100.0 3E-110 2E-113 620.8 45.4 550 1-567 1-648 (648) 9 protein:vir:102957 Length: 437 100.0 2E-107 1E-110 605.5 45.7 427 1-563 1-437 (437) 10 protein:vir:105470 Length: 451 100.0 1E-102 8E-106 579.2 44.6 433 1-563 1-451 (451) 11 protein:vir:78986 Length: 436 100.0 3E-101 2E-104 571.9 46.4 420 1-563 3-436 (436) 12 protein:vir:98824 Length: 774 100.0 6.1E-74 3.8E-77 422.0 36.8 482 1-569 270-772 (774) 13 protein:vir:108052 Length: 660 100.0 3.7E-72 2.3E-75 412.2 42.7 545 9-569 1-652 (660) 14 protein:vir:101187 Length: 663 100.0 1.2E-71 7.4E-75 409.4 43.6 526 9-569 1-653 (663) 15 protein:vir:101804 Length: 663 100.0 1E-71 6.2E-75 409.8 42.9 531 9-569 1-653 (663) 16 protein:vir:106984 Length: 743 100.0 9.5E-72 5.9E-75 410.0 41.4 547 8-569 1-737 (743) 17 protein:vir:6894 Length: 660 # 100.0 3.6E-71 2.2E-74 406.8 42.0 547 9-569 1-651 (660) 18 protein:vir:106427 Length: 679 100.0 5.5E-71 3.4E-74 405.8 40.1 532 9-569 1-670 (679) 19 protein:vir:7206 Length: 659 # 100.0 3.2E-70 2E-73 401.6 42.3 539 9-569 1-651 (659) 20 protein:vir:103456 Length: 659 100.0 4.4E-70 2.7E-73 400.8 42.2 542 9-569 1-651 (659) 21 protein:vir:100539 Length: 663 100.0 2.8E-70 1.7E-73 401.9 40.7 544 9-569 1-653 (663) 22 protein:vir:104858 Length: 729 100.0 1.8E-70 1.1E-73 402.9 38.4 549 7-569 1-722 (729) 23 protein:vir:104477 Length: 749 100.0 4.3E-70 2.6E-73 400.9 40.3 540 7-569 1-744 (749) 24 protein:vir:6594 Length: 666 # 100.0 7.5E-70 4.7E-73 399.5 40.1 544 9-569 1-656 (666) 25 protein:vir:98263 Length: 664 100.0 3.1E-69 1.9E-72 396.2 41.2 541 1-569 1-655 (664) 26 protein:vir:80984 Length: 666 100.0 3.7E-69 2.3E-72 395.7 40.8 548 9-569 1-656 (666) 27 protein:vir:107310 Length: 581 100.0 4.7E-69 2.9E-72 395.2 34.4 517 1-569 1-573 (581) 28 protein:vir:5663 Length: 671 # 100.0 4E-67 2.5E-70 384.6 40.7 546 9-569 1-666 (671) 29 protein:vir:7653 Length: 581 # 100.0 2E-67 1.2E-70 386.3 37.7 507 1-569 1-573 (581) 30 protein:vir:79092 Length: 477 100.0 4.3E-59 2.7E-62 340.5 33.9 440 1-569 1-472 (477) 31 protein:vir:107865 Length: 477 100.0 3E-59 1.8E-62 341.5 32.6 439 1-569 1-472 (477) 32 protein:vir:102359 Length: 356 100.0 2.4E-59 1.5E-62 341.9 26.5 326 187-562 1-356 (356) 33 protein:vir:5711 Length: 396 # 100.0 7.1E-52 4.4E-55 301.0 28.7 365 8-569 1-388 (396) 34 protein:vir:1845 Length: 392 # 100.0 7.6E-52 4.7E-55 300.8 28.7 358 8-569 1-385 (392) 35 protein:vir:6079 Length: 396 # 100.0 1.9E-51 1.2E-54 298.7 27.9 361 8-569 1-388 (396) 36 protein:vir:79181 Length: 390 100.0 1.6E-51 9.8E-55 299.1 27.0 360 1-569 1-383 (390) 37 protein:vir:103993 Length: 390 100.0 1.4E-51 8.6E-55 299.4 26.5 360 1-569 1-383 (390) 38 protein:vir:78206 Length: 390 100.0 1.4E-51 8.6E-55 299.4 26.5 360 1-569 1-383 (390) 39 protein:vir:79141 Length: 391 100.0 2E-51 1.2E-54 298.6 27.3 356 1-569 1-383 (391) 40 protein:vir:2035 Length: 396 # 100.0 4.2E-51 2.6E-54 296.7 27.0 365 8-569 1-388 (396) 41 protein:vir:1172 Length: 391 # 100.0 6E-51 3.7E-54 295.9 26.0 361 1-569 1-384 (391) 42 protein:vir:98553 Length: 395 100.0 4.1E-50 2.5E-53 291.4 29.5 361 8-569 1-388 (395) 43 protein:vir:100323 Length: 393 100.0 1.5E-48 9.5E-52 282.7 30.3 357 1-569 1-385 (393) 44 protein:vir:96740 Length: 388 100.0 6.2E-48 3.9E-51 279.4 29.6 353 1-569 1-382 (388) 45 protein:vir:79798 Length: 717 100.0 8.6E-47 5.3E-50 273.1 34.7 536 1-564 1-717 (717) 46 protein:vir:103168 Length: 641 100.0 4.2E-47 2.6E-50 274.8 32.8 446 6-466 1-641 (641) 47 protein:vir:10336 Length: 386 100.0 3.8E-46 2.3E-49 269.6 27.9 361 1-569 1-384 (386) 48 protein:vir:5833 Length: 742 # 100.0 3.7E-36 2.3E-39 214.9 35.0 503 1-569 156-741 (742) 49 protein:vir:489 Length: 498 # 100.0 4.7E-36 2.9E-39 214.3 33.2 444 1-569 1-496 (498) 50 protein:vir:4517 Length: 498 # 100.0 9.6E-36 5.9E-39 212.6 33.8 455 1-569 1-496 (498) 51 protein:vir:4463 Length: 498 # 100.0 1.7E-35 1E-38 211.2 33.2 455 1-569 1-496 (498) 52 protein:vir:1996 Length: 495 # 100.0 4.6E-34 2.9E-37 203.3 39.2 457 1-564 1-495 (495) 53 protein:vir:101326 Length: 529 99.9 5.4E-24 3.4E-27 148.1 31.9 474 1-564 1-529 (529) 54 protein:vir:95263 Length: 450 99.2 6.4E-10 4E-13 71.0 34.2 420 5-565 1-450 (450) 55 protein:vir:5260 Length: 502 # 99.1 2E-09 1.2E-12 68.3 35.1 448 1-564 1-502 (502) 56 protein:vir:96104 Length: 504 98.9 2E-08 1.3E-11 62.8 31.1 443 11-563 1-504 (504) 57 protein:vir:99586 Length: 507 98.8 6.5E-08 4.1E-11 60.0 33.9 447 11-563 1-507 (507) 58 protein:vir:276 Length: 369 # 98.6 2.4E-07 1.5E-10 56.9 25.6 326 190-567 1-369 (369) 59 protein:vir:78782 Length: 370 98.5 4.4E-07 2.7E-10 55.5 26.9 324 165-567 1-370 (370) 60 protein:vir:3751 Length: 376 # 98.5 5.5E-07 3.4E-10 54.9 26.4 323 191-568 1-376 (376) 61 protein:vir:94073 Length: 494 98.4 9.9E-07 6.1E-10 53.5 34.9 436 1-564 1-494 (494) 62 protein:vir:3788 Length: 376 # 98.3 1.2E-06 7.3E-10 53.1 29.5 323 151-568 1-376 (376) 63 protein:vir:80052 Length: 331 98.3 7.4E-07 4.6E-10 54.2 19.6 309 197-564 1-331 (331) 64 protein:vir:107720 Length: 515 98.3 1.5E-06 9.3E-10 52.5 37.1 456 1-563 1-515 (515) 65 protein:vir:101576 Length: 501 98.3 1.5E-06 9.3E-10 52.5 35.1 437 1-564 1-501 (501) 66 protein:vir:3636 Length: 501 # 98.3 1.7E-06 1E-09 52.3 36.7 442 1-564 1-501 (501) 67 protein:vir:106730 Length: 501 98.1 5.4E-06 3.3E-09 49.5 36.4 437 1-564 1-501 (501) 68 protein:vir:78611 Length: 501 97.8 1.6E-05 1E-08 46.8 35.7 436 1-564 1-501 (501) 69 protein:vir:96586 Length: 587 91.7 0.015 9.1E-06 30.6 18.4 443 1-552 102-587 (587) 70 protein:vir:3165 Length: 426 # 86.8 0.043 2.7E-05 28.1 24.7 394 1-564 1-426 (426) No 1 >protein:vir:80488 Length: 562 # NCBI annotation: Tsh # Family: family:all:2449 # MgeID: mge:1883 # MgeName: A511 # Cross-refs: genbank:acc:YP_001468473;genbank:gi:157325048;genbank:GeneID:5601446 Probab=100.00 E-value=6.3e-155 Score=865.95 Aligned_cols=562 Identities=65% Similarity=1.039 Sum_probs=542.2 Q ss_pred CCCccccCcceecCceEEEEEcCCCccccCCCCceEEEEeccCCCCCceeEEEcChHHHHHHhcCcchHHHHHHHhhhhh Q lcl|Aclame:pro 1 MAVEQFPRKKVSRPHTEITVDTSGIGGSSSSSDKTLMLVGSAKGGKPDTVYRFRNYQQAKQVLRSGDLLDAIELAWNASD 80 (569) Q Consensus 1 ma~~~~~~~~~~~PGvyi~~~~~~~~~~~~~~~~~~~~~g~a~~G~~~~~~~i~~~~~~~~~fg~g~l~~~~~~~~~~~~ 80 (569) ||...|+++.+.||||||+++++++++++++++++++|||.|++||+++|++|+||+||+++||||+|+++|++||.|+. T Consensus 1 ~~~~~~~~~~~~~pgv~~~~~~s~~~~~~~~~~~~~~~ig~a~~G~~~~~~~~~~~~~~~~~f~~g~l~~~i~~a~~~~~ 80 (562) T protein:vir:80 1 MAIEIYPRKPVSRPHTEISVDTSGIGGSSSGSEKILCLVGSATGGKPNAVYKVRNYSQAKSVFRSGELLDAIERAWNPGE 80 (562) T ss_pred CeeeeeCCCcccCCceEEEEecCCcccCCCCCCceEEEEEEeCCCCcceeEEEccHHHHHHHhcCCChHHHHHHhccccc Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999844 Q ss_pred hhccCCceEEEEEcCCCccceeeccceEEEEecCCcccceeEEEEecCCCCcceEEEEEecCCceeeecccccceeEEEe Q lcl|Aclame:pro 81 VNTASAGDILAVRVEDAKNATLTKGGLTFASTIYGVDANEIQVALEDNNLTHTKRLTVAFSKDGYKKVFDNLGKIFSIQY 160 (569) Q Consensus 81 ~~~~g~~~~~~~rv~~~~~a~~~~~~l~~~a~~~G~~gn~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 160 (569) .|||++||++||+++++|+++.++|+|+|+.+|+|||+||+++++++..+++++++.+++++..+++++++++|.|+| T Consensus 81 --~~g~~~~~~~rv~~a~~a~~~~~~~~~~~~~~g~~~n~i~v~~~~~~~~~~~~~~v~~~~~~~~ev~~~~g~v~~i~y 158 (562) T protein:vir:80 81 --GTGAGDILAMRVEEAKEATFEAEGVKVSSTIYGADANDIQVALEDNTITGTKRLSIVFAKERVNQVYDNLGSIFSIKY 158 (562) T ss_pred --ccCceEEEEEEcCCCCcceEEecceEEEEeecccCCCceEEEEecCCCCCCcceEEEecCCcceEEeeccCceeeeee Confidence 679999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred cCcccceeEEEEecCccceeeeeeeccccccccceeeeeccccccccceehhhhhhcccccceeEEecccCCcceecccc Q lcl|Aclame:pro 161 KGSEAQANFTIAQDSISKKATTLTLNVGSEPESTTEVMKYELGQGVYSETNVLVSAINSLPDWEAKFFPIGDKNLPTDAL 240 (569) Q Consensus 161 ~G~~a~a~~~v~~~~~s~~~~~lt~~~~~~~~~~~~v~~~~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 240 (569) +|.++.+.+++.+++.+..+..+.++.+.. ++..|+++.+.+....+++++|+.++.++++|.+.+++.++.+.. T Consensus 159 ~g~~~~a~~~i~~~~~~~~a~~l~~~~g~~-----~v~~~~l~~g~~~~~~~l~~~i~~~~~~tAky~g~~~n~i~~~~~ 233 (562) T protein:vir:80 159 KGTEASATFTVAVDPVTFKATKLTLKAGDK-----TVKEYDLGSGAYAETNVLISDINNLPDFEAKFFPIGDKNLTTDNF 233 (562) T ss_pred ccccccceeEEEecCccceEEEEEEecCCc-----ceeEEEeCCCccchhhhhhhhhccccceEEEecccCCceeeeccc Confidence 999999999999999988888888877643 677899999999999999999999999999999999999999999 Q ss_pred cchhhccccccceeehhhhhhhhhhhccCceEEEEeccCccccccceeeeecCCCCCchhHHHHHHHHHHhcCccEEEec Q lcl|Aclame:pro 241 EAVTKVDVKTEAVFVGALAGDIAKQLEYNDYVTVAVDATKPVEDFELTNLTGGSDGTAPESWANKFPLLANEGGYYLVPL 320 (569) Q Consensus 241 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~a~~~~~~LtGG~dg~~~~~~~~~l~~le~~~~~~i~~~ 320 (569) |.+...+.++....+....++++.....++|+++.+++++++++++.+.|+||+||+++.+|+++|++|+++++++++++ T Consensus 234 d~~~~~~~kt~~~~v~~~~~d~~~~~~~n~~v~~~~~~~~~la~~~~~~LtGG~dG~~~~~~~dal~~Le~~~~~~i~~~ 313 (562) T protein:vir:80 234 DAQIDVDIKTKEAYVKAVGGDIEKQTAYNGYVEFEFDRSKEIANFPLTKLTGGDNGTIPESWADKFSYFANEGGYYLVPL 313 (562) T ss_pred ccchhhhcccceeeeeehhhhhhhcccccceEEEEeccCccccccceeeeeCCCCCCccccHHHHHHHHHhCCcEEEEec Confidence 99999999988888888888888888889999999999999999999999999999998899999999999999999999 Q ss_pred CCCHHHHHHHHHHHHHHhcCCCeEEEEEcCCCCCCHHHHHHHhhhcCCceEEEEeccceeccCCcceeeechHHHHHHHH Q lcl|Aclame:pro 321 TDKQAVHSEALAFVKDRTDNGDPMRIIVGGGTNETVEESITRATNLRDPRASLVGFSGTRKMDDGRLLKLPGYMMASQIA 400 (569) Q Consensus 321 ~~d~~v~~~l~~~v~~~~~~g~~~~~vv~~~~~~~~~~~~~~a~~~n~~~v~~v~~~~~~~~~~g~~~~~~~~~~aa~vA 400 (569) ++|+++|+++++||++||++|++|++|++++.++++++++++++.||++|+++++|+++....+++...+|++++|+|+| T Consensus 314 t~d~ai~~~~~a~vkr~r~~g~~~~aVvg~~~~~~~~~~~~~a~~~n~e~vv~v~~~~~~~~~~~~~~~~~~~~~aa~vA 393 (562) T protein:vir:80 314 TSKQAVHAEALQFVRDCSYNGNPMRVFVGGGIGESMEQLFTRAIGLQNERAGLIGFSGTVKMDDGRSLKMPGYMFAAQVA 393 (562) T ss_pred CCChHHHHHHHHHHHHHHhCCCeEEEEecCCCCCCHHHHHHHhhhcCCCeEEEEecCeeEECCCCceeeechhHHHHHHH Confidence 99999999999999999999999999999999999999999999999999999999988888888999999999999999 Q ss_pred HHhhcCchhcCccceeeccccccccCCHHHHHHHHhcCcEEEEEecCCcceEEEEeeceeccCCCCchhhhhhhHHHHHH Q lcl|Aclame:pro 401 GIASGLEVGEAITFKHFNVTSVDRVFESSQLDMLNESGVISIEFVRNRTLTAFRVVQDVTTYNDKSDPVKNEMSVGEAND 480 (569) Q Consensus 401 G~~A~~~~~~s~T~~~~~~~~~~~~~t~~e~~~l~~~Gv~~l~~~~~~~~~~~ri~~~itT~~~~~d~~~~~i~v~R~~d 480 (569) |++|++++++||||++++++++.++|+++|+++|+++|++||++++++..+.+|+++++||++.++|+.|+||++||++| T Consensus 394 Gl~Ag~~~~~S~T~~~i~~~~v~~~lt~~e~~~li~~G~l~l~~~~~~~v~~~riv~~itT~t~~~~~~~~ki~viRv~D 473 (562) T protein:vir:80 394 GLTCGLEIGEAITFKNIAIETLDTIYEGSQLDQLNESGIITAEFVRNRAVTNFRIVDDVTTFNDKTDPVKSEIGVGEAND 473 (562) T ss_pred HHHhcCccccCccceeeccccccccCCHHHHHHHHhCCeEEEEEecCCcEEEEEeeccceeccCCCCchhhhhhhhHHHH Confidence 99999999999999999999999999999999999999999999999989999999999999999999999999999999 Q ss_pred HHHHHHHHHHHhcCCcccCChHHHHHHHHHHHHHHHHHHhCCcccCCCccccEEecCCCEEEEEEEEEEccceeEEEEEE Q lcl|Aclame:pro 481 FLVSELKIELDNNFIGTKVIDTSASLIKNFIQSFLDNKKRAREIQDYTPEEVQVVLEGDVASISMTVMPIRSLNKITVQL 560 (569) Q Consensus 481 ~i~~~i~~~~~~~~iGk~nn~~~~~~v~~~i~~~L~~l~~~gaI~~~~~~d~~v~~~~d~~~v~~~v~pv~~~e~I~~ti 560 (569) +|.++||+.++++||||+||+..|.+||++|.+||++|+++|+|++|++++++++.++|+++|++.++|++||||||||+ T Consensus 474 ~i~~dir~~~~~~yIGk~Nn~~~r~~v~~~i~~~L~~l~~~gaI~~~~~~dv~v~~~~d~~~v~~~v~Pv~~mekIy~ti 553 (562) T protein:vir:80 474 FLVSELKISLDNEYIGTKIIDTSASLVKNFVQSFLDRKKLAKEIQDYSPEEVQVVIEGDIARISLTVFPIRSMKKIEVSL 553 (562) T ss_pred HHHHHHHHHHHhcCCccccChHHHHHHHHHHHHHHHHHHhCCcccCCCccceEEEecCCEEEEEEEEEEcccceEEEEEE Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred EEEeeeeeC Q lcl|Aclame:pro 561 VYKQQILTA 569 (569) Q Consensus 561 ~v~~~~~~~ 569 (569) +++|+||+| T Consensus 554 ~~~~~~~~~ 562 (562) T protein:vir:80 554 VYRQQILTA 562 (562) T ss_pred EEEeeeecC Confidence 999999999 No 2 >protein:vir:99306 Length: 587 # NCBI annotation: putative major tail sheath protein # Family: family:all:2449 # MgeID: mge:1655 # MgeName: K # Cross-refs: genbank:acc:YP_024479;genbank:gi:48696438;genbank:GeneID:2948034 Probab=100.00 E-value=4.1e-155 Score=866.99 Aligned_cols=562 Identities=56% Similarity=0.926 Sum_probs=528.0 Q ss_pred CCCccccCcceecCceEEEEEcCCCccccCCCCceEEEEeccCCCCCceeEEEcChHHHHHHhcCcchHHHHHHHhhhhh Q lcl|Aclame:pro 1 MAVEQFPRKKVSRPHTEITVDTSGIGGSSSSSDKTLMLVGSAKGGKPDTVYRFRNYQQAKQVLRSGDLLDAIELAWNASD 80 (569) Q Consensus 1 ma~~~~~~~~~~~PGvyi~~~~~~~~~~~~~~~~~~~~~g~a~~G~~~~~~~i~~~~~~~~~fg~g~l~~~~~~~~~~~~ 80 (569) ||++.|++|+++||||||+++++++++++++++++++|||.|+|||+++|++|++|+||+++||||||+++|++||.|+. T Consensus 1 ~a~~~~~~~~~~~pgv~~~~~~~~~~~~~~~~~~~~~~~g~a~~G~~~~~~~~~~~~~~~~~~~~g~l~~~~~~a~~~~~ 80 (587) T protein:vir:99 1 MAVEPFPRRPITRPHASIEVDTSGIGGSAGSSEKVFCLIGQAEGGEPNTVYELRNYSQAKRLFRSGELLDAIELAWGSNP 80 (587) T ss_pred CcccccCCcccccCceEEEEecCCccccCCCCCceEEEEEEecCCccceeEEeccHHHHHHHhcCcchHHHHHHHhcccc Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999874 Q ss_pred hhccCCceEEEEEcCCCccceeeccceEEEEecCCcccceeEEEEecCCCCcceEEEEEecCCceeeecccccceeEEEe Q lcl|Aclame:pro 81 VNTASAGDILAVRVEDAKNATLTKGGLTFASTIYGVDANEIQVALEDNNLTHTKRLTVAFSKDGYKKVFDNLGKIFSIQY 160 (569) Q Consensus 81 ~~~~g~~~~~~~rv~~~~~a~~~~~~l~~~a~~~G~~gn~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 160 (569) .+||++||++||+++++|+++.++|+|+|++||.|||+|||+++++.+++++++++++++++..+++++++++|.|+| T Consensus 81 --~~g~~~~~~~rv~~~~~a~~~~~~l~~~a~~~G~~gN~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~~i~y 158 (587) T protein:vir:99 81 --NYTAGRILAMRIEDAKPASAEIGGLKITSKIYGNVANNIQVGLEKNTLSDSLRLRVIFQDDRFNEVYDNIGNIFTIKY 158 (587) T ss_pred --CCCceEEEEEEcCCCceeEEEecCeEEEEeeccccccceEEEEccCCCCcceeEEEEEecccceeeeeeccceeeEEe Confidence 589999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred cCcccceeEEEEecCccceeeeeeeccccccccceeeeeccccccccceehhhhhhcccccceeEEecccCCcceecccc Q lcl|Aclame:pro 161 KGSEAQANFTIAQDSISKKATTLTLNVGSEPESTTEVMKYELGQGVYSETNVLVSAINSLPDWEAKFFPIGDKNLPTDAL 240 (569) Q Consensus 161 ~G~~a~a~~~v~~~~~s~~~~~lt~~~~~~~~~~~~v~~~~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 240 (569) +|.++.+.+++.+++.+..+..+.++.+.. ++..|+|+.+.+....++.++|+.+++++++|.+.+++.+.+.+. T Consensus 159 ~g~~~~a~~~v~~~~~t~~a~~~~l~~g~~-----~v~~yrL~~g~~~~~~~~~~~i~~~~~~tAky~~~~~~~i~~~~~ 233 (587) T protein:vir:99 159 KGEEANATFSVEHDEETQKASRLVLKVGDQ-----EVKSYDLTGGAYDYTNAIITDINQLPDFEAKLSPFGDKNLESSKL 233 (587) T ss_pred ecccccceeeEeecCcceeeeeeeeecCCc-----eeEEEEecCCchHHHHHHHhhhccccceeEEeeccCCceeEeecc Confidence 999999999999999988888888877633 788999999999999999999999999999999999999999999 Q ss_pred cchhhccccccceeehhhhhhhhhhhccCceEEEE-------------------------eccCccccccceeeeecCCC Q lcl|Aclame:pro 241 EAVTKVDVKTEAVFVGALAGDIAKQLEYNDYVTVA-------------------------VDATKPVEDFELTNLTGGSD 295 (569) Q Consensus 241 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~-------------------------~~~~~~~a~~~~~~LtGG~d 295 (569) +.+.+..++++...+.+...++...+..+.++.++ ..+.+.+++++.+.|+||+| T Consensus 234 ~~~~~~~v~~~~~~v~a~~~D~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~t~LtGG~d 313 (587) T protein:vir:99 234 DKIENANIKDKAVYVKAVFGDLEKQTAYNGIVSFEQLNAEGEVPSNVEVEAGEESATVTATSPIKTIEPFELTKLKGGTN 313 (587) T ss_pred cccccceeeeeeeeeehhccceeeecccceeeeeeecccccchhhhhhhhhccccceeeeeccccceecccceeeecCCC Confidence 88888888877766666555554444444433321 23345567777889999999 Q ss_pred CCchhHHHHHHHHHHhcCccEEEecCCCHHHHHHHHHHHHHHhcCCCeEEEEEcCCCCCCHHHHHHHhhhcCCceEEEEe Q lcl|Aclame:pro 296 GTAPESWANKFPLLANEGGYYLVPLTDKQAVHSEALAFVKDRTDNGDPMRIIVGGGTNETVEESITRATNLRDPRASLVG 375 (569) Q Consensus 296 g~~~~~~~~~l~~le~~~~~~i~~~~~d~~v~~~l~~~v~~~~~~g~~~~~vv~~~~~~~~~~~~~~a~~~n~~~v~~v~ 375 (569) |+++.+|+++|++|+.+++++|+++++++++|+++++||++||++|++|++|++++.+++++++++++..+|++|+++++ T Consensus 314 G~~~~sy~~al~ale~~~~~~i~~~t~d~~i~a~l~a~vk~~r~~g~~~~aVlg~~~~~~~~~~~~~a~~~n~e~vi~v~ 393 (587) T protein:vir:99 314 GEPPATWADKLDKFAHEGGYYIVPLSSKQSVHAEVASFVKERSDAGEPMRAIVGGGFNESKEQLFGRQASLSNPRVSLVA 393 (587) T ss_pred CCccccHHHHHHHHhhCCcEEEEecCCCHHHHHHHHHHHHHHHhCCCcEEEEecCCCCCCHHHHHHHhhhcCCCcEEEEe Confidence 99988999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred ccceeccCCcceeeechHHHHHHHHHHhhcCchhcCccceeeccccccccCCHHHHHHHHhcCcEEEEEecCCcceEEEE Q lcl|Aclame:pro 376 FSGTRKMDDGRLLKLPGYMMASQIAGIASGLEVGEAITFKHFNVTSVDRVFESSQLDMLNESGVISIEFVRNRTLTAFRV 455 (569) Q Consensus 376 ~~~~~~~~~g~~~~~~~~~~aa~vAG~~A~~~~~~s~T~~~~~~~~~~~~~t~~e~~~l~~~Gv~~l~~~~~~~~~~~ri 455 (569) +++++.+.+|+...+|++++|+|+||++|++++++||||++++++++.++|+++|+++|+++|+++|++++++.+.+||| T Consensus 394 ~~~~~~~~dg~~~~~~~~~~aa~vAGl~Ag~~~~~SlT~~~i~~~~v~~~~t~~e~e~li~~Gvl~l~~~~~~~~~~vri 473 (587) T protein:vir:99 394 NSGTFVMDDGRKNHVPAYMVAVALGGLASGLEIGESITFKPLRVSSLDQIYESIDLDELNENGIISIEFVRNRTNTFFRI 473 (587) T ss_pred ccceEecCCCceeeechHHHHHHHHHHHhcCchhcCccceeeecccccccCCHHHHHHHHhCCeEEEEEecCCcceEEEE Confidence 99988899999999999999999999999999999999999999999999999999999999999999999998899999 Q ss_pred eeceeccCCCCchhhhhhhHHHHHHHHHHHHHHHHHhcCCcccCChHHHHHHHHHHHHHHHHHHhCCcccCCCccccEEe Q lcl|Aclame:pro 456 VQDVTTYNDKSDPVKNEMSVGEANDFLVSELKIELDNNFIGTKVIDTSASLIKNFIQSFLDNKKRAREIQDYTPEEVQVV 535 (569) Q Consensus 456 ~~~itT~~~~~d~~~~~i~v~R~~d~i~~~i~~~~~~~~iGk~nn~~~~~~v~~~i~~~L~~l~~~gaI~~~~~~d~~v~ 535 (569) +++||||+.++|+.|+||+++|++|+|.++||+.++++||||+||+..|..||++|.+||++|+++|+|++|++++++++ T Consensus 474 v~~ItT~t~~~~~~~~~i~viRv~D~i~~di~~~~~~~yiGk~Nn~~~r~~i~~~i~~~L~~l~~~gaI~~~~~~dv~v~ 553 (587) T protein:vir:99 474 VDDVTTFNDKSDPVKAEMAVGEANDFLVSELKVQLEDQFIGTRTINTSASIIKDFIQSYLGRKKRDNEIQDFPAEDVQVI 553 (587) T ss_pred eeceeeccCCCCchhhhhhhhhhHHHHHHHHHHHHHhhCCccccchHHHHHHHHHHHHHHHHHHhCCcccCCCccceEEE Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred cCCCEEEEEEEEEEccceeEEEEEEEEEeeeeeC Q lcl|Aclame:pro 536 LEGDVASISMTVMPIRSLNKITVQLVYKQQILTA 569 (569) Q Consensus 536 ~~~d~~~v~~~v~pv~~~e~I~~ti~v~~~~~~~ 569 (569) .++|+++|++.++|++||||||||++++|+||+| T Consensus 554 ~~~d~~~v~~~v~Pv~~mekIy~tv~~~~~~~~~ 587 (587) T protein:vir:99 554 VEGNEARISMTVYPIRSFKKISVSLVYKQQTLQA 587 (587) T ss_pred ecCCEEEEEEEEEEcccceEEEEEEEEEeeeecC Confidence 9999999999999999999999999999999999 No 3 >protein:vir:63742 Length: 562 # NCBI annotation: Tsh # Family: family:all:2449 # MgeID: mge:1517 # MgeName: P100 # Cross-refs: genbank:gi:82547629;genbank:GeneID:3783475 Probab=100.00 E-value=4.5e-155 Score=866.79 Aligned_cols=562 Identities=65% Similarity=1.038 Sum_probs=540.7 Q ss_pred CCCccccCcceecCceEEEEEcCCCccccCCCCceEEEEeccCCCCCceeEEEcChHHHHHHhcCcchHHHHHHHhhhhh Q lcl|Aclame:pro 1 MAVEQFPRKKVSRPHTEITVDTSGIGGSSSSSDKTLMLVGSAKGGKPDTVYRFRNYQQAKQVLRSGDLLDAIELAWNASD 80 (569) Q Consensus 1 ma~~~~~~~~~~~PGvyi~~~~~~~~~~~~~~~~~~~~~g~a~~G~~~~~~~i~~~~~~~~~fg~g~l~~~~~~~~~~~~ 80 (569) ||...|+++.|+|||||||++++++++++++++++++|||.|++||+++|++|++|+||+++||||+|+++|++||.|+ T Consensus 1 ~~~~~~~~~~~~~Pgv~~~~~~s~~~~~~~~~~~~~~~iG~a~~G~~~~~~~~~~~~~~~~~fg~g~l~~~i~~a~~~~- 79 (562) T protein:vir:63 1 MAIEIYPRKPVSRPHTEISVDTSGIGGSSSGSEKILCLVGSATGGKPNAVYKVRNYSQAKSVFRSGELLDAIERAWNPG- 79 (562) T ss_pred CeeeeeCCCcccCCceEEEEecCCCcccCCCCCceEEEEEEeCCCCCceeEEEccHHHHHHHhcCCchHHHHHHhcccc- Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999999984 Q ss_pred hhccCCceEEEEEcCCCccceeeccceEEEEecCCcccceeEEEEecCCCCcceEEEEEecCCceeeecccccceeEEEe Q lcl|Aclame:pro 81 VNTASAGDILAVRVEDAKNATLTKGGLTFASTIYGVDANEIQVALEDNNLTHTKRLTVAFSKDGYKKVFDNLGKIFSIQY 160 (569) Q Consensus 81 ~~~~g~~~~~~~rv~~~~~a~~~~~~l~~~a~~~G~~gn~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 160 (569) +.|||++||++||+++++|+++.++++|+|+.+|+|||+||+++++|...+.++++++++++...+++++++++|.|+| T Consensus 80 -~~~g~~~~~~~rv~~a~~a~~~~~~~~~~a~~~g~~~n~i~v~~~~~~~~~~~~~~v~~~~~~~~ev~~~~g~V~~i~y 158 (562) T protein:vir:63 80 -EGTGAGDILAMRVEEAKEATFEAEGVKVSSTIYGADANDIQVALEDNTITGTKRLSIVFAKERVNQVYDNLGSIFSIKY 158 (562) T ss_pred -ccCCceEEEEEEcCCCccceeEecceeEEEeecccCCCeEEEEEecCCCCCCcceEEEecCCCcchhhhhccceeeeee Confidence 4679999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred cCcccceeEEEEecCccceeeeeeeccccccccceeeeeccccccccceehhhhhhcccccceeEEecccCCcceecccc Q lcl|Aclame:pro 161 KGSEAQANFTIAQDSISKKATTLTLNVGSEPESTTEVMKYELGQGVYSETNVLVSAINSLPDWEAKFFPIGDKNLPTDAL 240 (569) Q Consensus 161 ~G~~a~a~~~v~~~~~s~~~~~lt~~~~~~~~~~~~v~~~~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 240 (569) +|.++.+.+++.+++.+..+..+.++.+.. ++..|+|+.+.+....++++.|+.++.++++|.+.+++.++.+.. T Consensus 159 ~g~~~~~~~~v~~~~~~~~a~~l~~~~g~~-----~v~~~~L~~g~~~~~~~l~~~in~~~~~~aky~~~~gn~i~~~~~ 233 (562) T protein:vir:63 159 KGTEASATFTVAVDPVTFKATKLTLKAGDK-----TVKEYDLGSGAYAETNVLISDINNLPDFEAKFFPIGDKNLTTDNF 233 (562) T ss_pred ecccccceEEEEecCcceeEEEEEeecCCc-----ceeEEEecCCccchhHHHHHhhccccceEEEeeccCCceeeeecc Confidence 999999999999998888888888777643 677899999999999999999999999999999999999999999 Q ss_pred cchhhccccccceeehhhhhhhhhhhccCceEEEEeccCccccccceeeeecCCCCCchhHHHHHHHHHHhcCccEEEec Q lcl|Aclame:pro 241 EAVTKVDVKTEAVFVGALAGDIAKQLEYNDYVTVAVDATKPVEDFELTNLTGGSDGTAPESWANKFPLLANEGGYYLVPL 320 (569) Q Consensus 241 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~a~~~~~~LtGG~dg~~~~~~~~~l~~le~~~~~~i~~~ 320 (569) |.+.+.++++...++....++++.....+.|+.+.+++++++++++.+.|+||+||+++.+|+++|++|+.+++++++++ T Consensus 234 d~~~~~~vkt~~~~v~t~~~d~~~~~~~~~~v~~~~~~~~~la~~~~~~LtGG~dGt~~~~~~~al~ale~~~~~~i~~~ 313 (562) T protein:vir:63 234 DAQIDVDIKTKEAYVKAVGGDIEKQTAYNGYVDFEFDRSKEIANFPLTKLTGGDNGTIPESWADKFSYFANEGGYYLVPL 313 (562) T ss_pred ccccccchhhhhhhhhhhhhhhhhcccccceeeeeeccccceecccceeeecCCCCCchhhHHHHHHHHHhCCcEEEEec Confidence 99999999887777777777888878889999999999999999999999999999999899999999999999999999 Q ss_pred CCCHHHHHHHHHHHHHHhcCCCeEEEEEcCCCCCCHHHHHHHhhhcCCceEEEEeccceeccCCcceeeechHHHHHHHH Q lcl|Aclame:pro 321 TDKQAVHSEALAFVKDRTDNGDPMRIIVGGGTNETVEESITRATNLRDPRASLVGFSGTRKMDDGRLLKLPGYMMASQIA 400 (569) Q Consensus 321 ~~d~~v~~~l~~~v~~~~~~g~~~~~vv~~~~~~~~~~~~~~a~~~n~~~v~~v~~~~~~~~~~g~~~~~~~~~~aa~vA 400 (569) ++|+++|+++++||++||++|++|++|++++.+++++++++++..||++|+++++|++.....+++...+|++++|||+| T Consensus 314 t~d~av~~~l~a~vkr~~~~g~~~~aVlg~~~~~~~~~~~~~a~~~n~ervv~v~~~~~~~~~~~~~~~~~~~~~aa~vA 393 (562) T protein:vir:63 314 TSKQAVHAEALQFVRDCSYNGNPMRVFVGGGIGESMEQLFTRAIGLQNERAGLIGFSGTVKMDDGRSLKMPGYMFAAQVA 393 (562) T ss_pred CCCHHHHHHHHHHHHHHHhCCCcEEEEecCCCCCCHHHHHHHhhhcCCCcEEEEecCeeEECCCCceeeechhHHHHHHH Confidence 99999999999999999999999999999999999999999999999999999999988888888889999999999999 Q ss_pred HHhhcCchhcCccceeeccccccccCCHHHHHHHHhcCcEEEEEecCCcceEEEEeeceeccCCCCchhhhhhhHHHHHH Q lcl|Aclame:pro 401 GIASGLEVGEAITFKHFNVTSVDRVFESSQLDMLNESGVISIEFVRNRTLTAFRVVQDVTTYNDKSDPVKNEMSVGEAND 480 (569) Q Consensus 401 G~~A~~~~~~s~T~~~~~~~~~~~~~t~~e~~~l~~~Gv~~l~~~~~~~~~~~ri~~~itT~~~~~d~~~~~i~v~R~~d 480 (569) |++|++++++||||++++++++.++|+++|+++|+++|+++|++++++..+.+|+++++||++.++|+.|+||+++|++| T Consensus 394 Gl~A~~~~~~SlT~~~i~~~~v~~~~t~~e~~~li~~Gv~~l~~~~~~~v~~~~iv~~itT~t~~~~~~~~ki~viRv~D 473 (562) T protein:vir:63 394 GLTCGLEIGEAITFKNIAIETLDTIYEGSQLDQLNESGIITAEFVRNRAVTNFRIVDDVTTFNDKTDPVKSEIGVGEAND 473 (562) T ss_pred HHhhcCchhcCccceeeccccccccCCHHHHHHHHhCCeEEEEEecCCcEEEEEeeccceecCCCCCchhhhhhhhHHHH Confidence 99999999999999999999999999999999999999999999999988999999999999999999999999999999 Q ss_pred HHHHHHHHHHHhcCCcccCChHHHHHHHHHHHHHHHHHHhCCcccCCCccccEEecCCCEEEEEEEEEEccceeEEEEEE Q lcl|Aclame:pro 481 FLVSELKIELDNNFIGTKVIDTSASLIKNFIQSFLDNKKRAREIQDYTPEEVQVVLEGDVASISMTVMPIRSLNKITVQL 560 (569) Q Consensus 481 ~i~~~i~~~~~~~~iGk~nn~~~~~~v~~~i~~~L~~l~~~gaI~~~~~~d~~v~~~~d~~~v~~~v~pv~~~e~I~~ti 560 (569) +|.++||+.++++|||||||+.+|.+||++|.+||++|+++|+|++|++++++++.++|+++|++.++|++||||||||+ T Consensus 474 ~i~~dir~~~~~~yiGk~Nn~~~r~~v~~~i~~~L~~l~~~gaI~~~~~~dv~v~~~~d~~~v~~~v~pv~~mekIy~ti 553 (562) T protein:vir:63 474 FLVSELKISLDNEYIGTKIIDTSASLVKNFVQSFLDRKKLAKEIQDYSPEEVQVVIEGDVARISLTVFPIRSMKKIEVSL 553 (562) T ss_pred HHHHHHHHHHHhcCCccccChHHHHHHHHHHHHHHHHHHhCCcccCCCccceEEEecCCEEEEEEEEEEcccceEEEEEE Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred EEEeeeeeC Q lcl|Aclame:pro 561 VYKQQILTA 569 (569) Q Consensus 561 ~v~~~~~~~ 569 (569) +++|+||+| T Consensus 554 ~~~~~~~~~ 562 (562) T protein:vir:63 554 VYRQQILTA 562 (562) T ss_pred EEeeeeecC Confidence 999999999 No 4 >protein:vir:80779 Length: 569 # NCBI annotation: putative tail sheath protein # Family: family:all:2449 # MgeID: mge:1885 # MgeName: phiEF24C # Cross-refs: genbank:acc:YP_001504132;genbank:gi:158079319;genbank:GeneID:5666428 Probab=100.00 E-value=5.9e-155 Score=866.11 Aligned_cols=569 Identities=100% Similarity=1.356 Sum_probs=553.1 Q ss_pred CCCccccCcceecCceEEEEEcCCCccccCCCCceEEEEeccCCCCCceeEEEcChHHHHHHhcCcchHHHHHHHhhhhh Q lcl|Aclame:pro 1 MAVEQFPRKKVSRPHTEITVDTSGIGGSSSSSDKTLMLVGSAKGGKPDTVYRFRNYQQAKQVLRSGDLLDAIELAWNASD 80 (569) Q Consensus 1 ma~~~~~~~~~~~PGvyi~~~~~~~~~~~~~~~~~~~~~g~a~~G~~~~~~~i~~~~~~~~~fg~g~l~~~~~~~~~~~~ 80 (569) ||+..|+++.+.|||||++++++++++++++++++++|||.|++||+++|++|++|+||+++||+|+|++|+++||+|.. T Consensus 1 ~~~~~~~~~~~~~Pgv~~~~~~~~~~~~~~~~~~~~~~ig~a~~G~~~~~~~~~~~~~~~~~f~~g~l~~a~~~a~~~~~ 80 (569) T protein:vir:80 1 MAVEQFPRKKVSRPHTEITVDTSGIGGSSSSSDKTLMLVGSAKGGKPDTVYRFRNYQQAKQVLRSGDLLDAIELAWNASD 80 (569) T ss_pred CeeeeecCCccccCceEEEEecCCCcCCCCCCceeEEEEEEeCCCCCceeEEecCHHHHHHHhcCCchhHHHHhhccCcc Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred hhccCCceEEEEEcCCCccceeeccceEEEEecCCcccceeEEEEecCCCCcceEEEEEecCCceeeecccccceeEEEe Q lcl|Aclame:pro 81 VNTASAGDILAVRVEDAKNATLTKGGLTFASTIYGVDANEIQVALEDNNLTHTKRLTVAFSKDGYKKVFDNLGKIFSIQY 160 (569) Q Consensus 81 ~~~~g~~~~~~~rv~~~~~a~~~~~~l~~~a~~~G~~gn~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 160 (569) ++.+|+++||++|++++++|+++.++|+++|+.+|+|||+|+++++++...+++++++.+..+...+.+++++++|.++| T Consensus 81 ~~~~~~~~~~~~rv~~a~~a~~~~~~~~~~a~~~g~~~n~i~v~l~~~~~~~~~~~~v~~~~~~~~~~~~~ig~v~si~y 160 (569) T protein:vir:80 81 VNTASAGDILAVRVEDAKNATLTKGGLTFASTIYGVDANEIQVALEDNNLTHTKRLTVAFSKDGYKKVFDNLGKIFSIQY 160 (569) T ss_pred ccccCceEEEEEEcCCCeeeeeeccceeeeeeeccCCCceEEEEEecCcCCcceeeEEeeecCCCccccccccceeeEEE Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred cCcccceeEEEEecCccceeeeeeeccccccccceeeeeccccccccceehhhhhhcccccceeEEecccCCcceecccc Q lcl|Aclame:pro 161 KGSEAQANFTIAQDSISKKATTLTLNVGSEPESTTEVMKYELGQGVYSETNVLVSAINSLPDWEAKFFPIGDKNLPTDAL 240 (569) Q Consensus 161 ~G~~a~a~~~v~~~~~s~~~~~lt~~~~~~~~~~~~v~~~~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 240 (569) +|.++.+.+++..++....+..|..+.+.+.+...++..|+++.+.+.++.+++..++..++|+++|.+.+++.+..+.+ T Consensus 161 tg~~~~a~~~~~~~~~~~~a~~l~~~~g~~~~~~~~v~~~~~~~~~~~~~~~lv~~~~~~~~f~a~~~~~~~~~~~~~~~ 240 (569) T protein:vir:80 161 KGSEAQANFTIAQDSISKKATTLTLNVGSEPESTTEVMKYELGQGVYSETNVLVSAINSLPDWEAKFFPIGDKNLPTDAL 240 (569) T ss_pred eeccccceEEeecCcCcceeEEEEEEecCCcceeEEEEeeccCCccchhhhhhhhhcCCccCceEEEEecCCCcceehhc Confidence 99999999999999888889999999998888899999999999999999999999999999999999999999999999 Q ss_pred cchhhccccccceeehhhhhhhhhhhccCceEEEEeccCccccccceeeeecCCCCCchhHHHHHHHHHHhcCccEEEec Q lcl|Aclame:pro 241 EAVTKVDVKTEAVFVGALAGDIAKQLEYNDYVTVAVDATKPVEDFELTNLTGGSDGTAPESWANKFPLLANEGGYYLVPL 320 (569) Q Consensus 241 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~a~~~~~~LtGG~dg~~~~~~~~~l~~le~~~~~~i~~~ 320 (569) |+....+++++...+.....++.+.++.++|+.+++++++++++++.+.|+||+||+++.+|+++|++|+++++++++++ T Consensus 241 d~~~~~~~~t~~~~~~~~~~di~~~~~~~~~v~~~~~~~~~l~~~~~~~LtGG~dG~~~~~~~~~l~~le~~~~~~i~~~ 320 (569) T protein:vir:80 241 EAVTKVDVKTEAVFVGALAGDIAKQLEYNDYVTVAVDATKPVEDFELTNLTGGSDGTAPESWANKFPLLANEGGYYLVPL 320 (569) T ss_pred cchhheeccccceeeehhHHHHHHhhcCCceEEEEecCCcceeeecceeecCCCCCCccchHHHHHHHHhhCCcEEEEec Confidence 99999999988878888888999999999999999999999999999999999999998899999999999999999999 Q ss_pred CCCHHHHHHHHHHHHHHhcCCCeEEEEEcCCCCCCHHHHHHHhhhcCCceEEEEeccceeccCCcceeeechHHHHHHHH Q lcl|Aclame:pro 321 TDKQAVHSEALAFVKDRTDNGDPMRIIVGGGTNETVEESITRATNLRDPRASLVGFSGTRKMDDGRLLKLPGYMMASQIA 400 (569) Q Consensus 321 ~~d~~v~~~l~~~v~~~~~~g~~~~~vv~~~~~~~~~~~~~~a~~~n~~~v~~v~~~~~~~~~~g~~~~~~~~~~aa~vA 400 (569) ++++++|+++++|||+||++|++|++|++++.+.++++++++++.||++|+++++|++.....+++...+|++++|+|+| T Consensus 321 t~d~av~~~l~a~vkr~r~~g~~~~aVvg~~~~~~~~~~~~~a~~~n~e~vv~v~~~~~~~~~~g~~~~~~~~~~aa~vA 400 (569) T protein:vir:80 321 TDKQAVHSEALAFVKDRTDNGDPMRIIVGGGTNETVEESITRATNLRDPRASLVGFSGTRKMDDGRLLKLPGYMMASQIA 400 (569) T ss_pred CCChHHHHHHHHHHHHHHhCCCcEEEEecCCCCCCHHHHHHHHhhcCCCeEEEEecCceeecCCCcceeechhhHHHHHH Confidence 99999999999999999999999999999999999999999999999999999999988888889989999999999999 Q ss_pred HHhhcCchhcCccceeeccccccccCCHHHHHHHHhcCcEEEEEecCCcceEEEEeeceeccCCCCchhhhhhhHHHHHH Q lcl|Aclame:pro 401 GIASGLEVGEAITFKHFNVTSVDRVFESSQLDMLNESGVISIEFVRNRTLTAFRVVQDVTTYNDKSDPVKNEMSVGEAND 480 (569) Q Consensus 401 G~~A~~~~~~s~T~~~~~~~~~~~~~t~~e~~~l~~~Gv~~l~~~~~~~~~~~ri~~~itT~~~~~d~~~~~i~v~R~~d 480 (569) |++|++++++||||++++++++.++|+++|+++|+++|+++|++++++..++||+++++|||+.++|+.|+||++||++| T Consensus 401 G~~A~~~~~~S~T~k~i~~~~i~~~lt~~e~~~li~~G~~~l~~~~~~~~~v~~~vn~itT~t~~~~~~~~~i~viRv~D 480 (569) T protein:vir:80 401 GIASGLEVGEAITFKHFNVTSVDRVFESSQLDMLNESGVISIEFVRNRTLTAFRVVQDVTTYNDKSDPVKNEMSVGEAND 480 (569) T ss_pred HHHhcCccccCccceeeccccccccCCHHHHHHHHhCCeEEEEEecCceEEEEEEeccceecCCCCCchhhhhhhhHHHH Confidence 99999999999999999999999999999999999999999999999988999999999999999999999999999999 Q ss_pred HHHHHHHHHHHhcCCcccCChHHHHHHHHHHHHHHHHHHhCCcccCCCccccEEecCCCEEEEEEEEEEccceeEEEEEE Q lcl|Aclame:pro 481 FLVSELKIELDNNFIGTKVIDTSASLIKNFIQSFLDNKKRAREIQDYTPEEVQVVLEGDVASISMTVMPIRSLNKITVQL 560 (569) Q Consensus 481 ~i~~~i~~~~~~~~iGk~nn~~~~~~v~~~i~~~L~~l~~~gaI~~~~~~d~~v~~~~d~~~v~~~v~pv~~~e~I~~ti 560 (569) +|.++||+.++++||||+||+..|.+||++|++||++||++|+|++|+++++++++++|+++|+++++|++||||||||| T Consensus 481 ~i~~dir~~~~~~yiGk~nn~~~r~~v~~~i~~~L~~l~~~gaI~~~~~~dv~v~~~~d~~~v~~~v~Pv~~~ekI~~ti 560 (569) T protein:vir:80 481 FLVSELKIELDNNFIGTKVIDTSASLIKNFIQSFLDNKKRAREIQDYTPEEVQVVLEGDVASISMTVMPIRSLNKITVQL 560 (569) T ss_pred HHHHHHHHHHHhhcCcccCChhHHHHHHHHHHHHHHHHHhCCcccCCCccceEEEecCCEEEEEEEEEEcccccEEEEEE Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred EEEeeeeeC Q lcl|Aclame:pro 561 VYKQQILTA 569 (569) Q Consensus 561 ~v~~~~~~~ 569 (569) +++|+||+| T Consensus 561 ~~~~~~~~~ 569 (569) T protein:vir:80 561 VYKQQILTA 569 (569) T ss_pred EEeeeeecC Confidence 999999999 No 5 >protein:vir:95741 Length: 587 # NCBI annotation: ORF011 # Family: family:all:2449 # MgeID: mge:1577 # MgeName: G1 # Cross-refs: genbank:acc:YP_240910;genbank:gi:66394960;genbank:GeneID:5132682 Probab=100.00 E-value=2.2e-154 Score=862.94 Aligned_cols=562 Identities=56% Similarity=0.926 Sum_probs=525.9 Q ss_pred CCCccccCcceecCceEEEEEcCCCccccCCCCceEEEEeccCCCCCceeEEEcChHHHHHHhcCcchHHHHHHHhhhhh Q lcl|Aclame:pro 1 MAVEQFPRKKVSRPHTEITVDTSGIGGSSSSSDKTLMLVGSAKGGKPDTVYRFRNYQQAKQVLRSGDLLDAIELAWNASD 80 (569) Q Consensus 1 ma~~~~~~~~~~~PGvyi~~~~~~~~~~~~~~~~~~~~~g~a~~G~~~~~~~i~~~~~~~~~fg~g~l~~~~~~~~~~~~ 80 (569) ||++.|++|++.||||||+++++++++++++++++++|||.|+|||+++|++|++|+||+++||||||++++++||.|+. T Consensus 1 ~a~~~~~~~~~~~pgv~~~~~~~~~~~~~~~~~~~~~~~g~a~~G~~~~~~~~~~~~~~~~~~~~g~l~~~~~~a~~~~~ 80 (587) T protein:vir:95 1 MAVEPFPRRPITRPHASIEVDTSGIGGSAGSSEKVFCLIGQAEGGEPNTVYELRNYSQAKRLFRSGELLDAIELAWGSNP 80 (587) T ss_pred CcccccCCcccccCceEEEEecCCccccCCCCCceEEEEEEeCCCCCceeEEeccHHHHHHHhcCcchHHHHHHHhcccc Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999998874 Q ss_pred hhccCCceEEEEEcCCCccceeeccceEEEEecCCcccceeEEEEecCCCCcceEEEEEecCCceeeecccccceeEEEe Q lcl|Aclame:pro 81 VNTASAGDILAVRVEDAKNATLTKGGLTFASTIYGVDANEIQVALEDNNLTHTKRLTVAFSKDGYKKVFDNLGKIFSIQY 160 (569) Q Consensus 81 ~~~~g~~~~~~~rv~~~~~a~~~~~~l~~~a~~~G~~gn~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 160 (569) .+||++||++||+++++|+++.++|+|+|++||.|||+|||+++++.+++++++++.+.+++..+++++++++|.|+| T Consensus 81 --~~g~~~~~~~rv~~~~~a~~~~~~l~~~a~~~G~~gN~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~si~y 158 (587) T protein:vir:95 81 --NYTAGRILAMRIEDAKPASAEIGGLKITSKIYGNVANNIQVGLEKNTLSDSLRLRVIFQDDRFNEVYDNIGNIFTIKY 158 (587) T ss_pred --CCCceEEEEEEcCCCceeEEEecCeEEEEecccccccceEEEEecCCCCCceeEEEEEecccceeeeeeccceeeeee Confidence 589999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred cCcccceeEEEEecCccceeeeeeeccccccccceeeeeccccccccceehhhhhhcccccceeEEecccCCcceecccc Q lcl|Aclame:pro 161 KGSEAQANFTIAQDSISKKATTLTLNVGSEPESTTEVMKYELGQGVYSETNVLVSAINSLPDWEAKFFPIGDKNLPTDAL 240 (569) Q Consensus 161 ~G~~a~a~~~v~~~~~s~~~~~lt~~~~~~~~~~~~v~~~~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 240 (569) +|.++.+.+++.+++.+..+..+.++.+.. +++.|+|+.+.+.++.+++++|+.+|+++|+|.+.+++.+++.+. T Consensus 159 ~g~~~~~~~~v~~~~~t~~a~~~~l~~g~~-----~v~~yrL~~g~~~~~~~~~~~in~~~~~tAky~g~~~~~i~~~~~ 233 (587) T protein:vir:95 159 KGEEANATFSVEHDEETQKASRLVLKVGDQ-----EVKSYDLTGGAYDYTNAIITDINQLPDFEAKLSPFGDKNLESSKL 233 (587) T ss_pred eccccccceeeeecccceeeeeeeeecCCc-----eEEEEEecCCchHHHHHHHHhhccccceEEEEecccCceeEEeec Confidence 999999999999999888888888876633 788999999999999999999999999999999999999999988 Q ss_pred cchhhccccccceeehhhhhhhhhhhccCceEEEE-------------------------eccCccccccceeeeecCCC Q lcl|Aclame:pro 241 EAVTKVDVKTEAVFVGALAGDIAKQLEYNDYVTVA-------------------------VDATKPVEDFELTNLTGGSD 295 (569) Q Consensus 241 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~-------------------------~~~~~~~a~~~~~~LtGG~d 295 (569) +.+.+..++++...+.+...++........++.+. ..+.+.++.++.+.|+||+| T Consensus 234 ~~~~~~~v~~~~~~v~a~~~d~~~~~~~~~~v~~~~~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~a~~~~t~LtGG~d 313 (587) T protein:vir:95 234 DKIENANIKDKAVYVKAVFGDLEKQTAYNGIVSFEQLNAEGEVPSNVEVEAGEESATVTATSPIKTIEPFELTKLKGGTN 313 (587) T ss_pred CcccccceehhhhhhhhhhcceeeeeeceeeeeeecccccceeccchhhhhcccchheeccccccceeccceeeeecCCC Confidence 88888888776666665555543333333333221 23445567777788999999 Q ss_pred CCchhHHHHHHHHHHhcCccEEEecCCCHHHHHHHHHHHHHHhcCCCeEEEEEcCCCCCCHHHHHHHhhhcCCceEEEEe Q lcl|Aclame:pro 296 GTAPESWANKFPLLANEGGYYLVPLTDKQAVHSEALAFVKDRTDNGDPMRIIVGGGTNETVEESITRATNLRDPRASLVG 375 (569) Q Consensus 296 g~~~~~~~~~l~~le~~~~~~i~~~~~d~~v~~~l~~~v~~~~~~g~~~~~vv~~~~~~~~~~~~~~a~~~n~~~v~~v~ 375 (569) |+++.+|+++|++|+.+++++|+++++++++|+++++||++||++|++|++|++++.++++++++++++.||++|+++++ T Consensus 314 G~~~~~y~~~l~ale~~~~~~i~~~t~d~~v~a~l~a~vk~~~~~g~~~~aVvg~~~~~~~~~~~~~a~~~n~ervi~v~ 393 (587) T protein:vir:95 314 GEPPATWADKLDKFAHEGGYYIVPLSSKQSVHAEVASFVKERSDAGEPMRAIVGGGFNESKEQLFGRQESLSNPRVSLVA 393 (587) T ss_pred CCCcccHHHHHHHHHhCCcEEEEecCCCHHHHHHHHHHHHHHHhCCCcEEEEEcCCCCCCHHHHHHHHhhcCCCcEEEec Confidence 99988999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred ccceeccCCcceeeechHHHHHHHHHHhhcCchhcCccceeeccccccccCCHHHHHHHHhcCcEEEEEecCCcceEEEE Q lcl|Aclame:pro 376 FSGTRKMDDGRLLKLPGYMMASQIAGIASGLEVGEAITFKHFNVTSVDRVFESSQLDMLNESGVISIEFVRNRTLTAFRV 455 (569) Q Consensus 376 ~~~~~~~~~g~~~~~~~~~~aa~vAG~~A~~~~~~s~T~~~~~~~~~~~~~t~~e~~~l~~~Gv~~l~~~~~~~~~~~ri 455 (569) +++++.+.+|+...+|++++|+|+||++|++++++||||++++++++.++|+++|+++|+++|+++|++++++....||| T Consensus 394 ~~~~~~~~dg~~~~~~~~~~aa~vAGl~Ag~~~~~SlT~~~i~~~~v~~~~t~~e~e~ai~~Gvl~l~~~~~~~~~~vri 473 (587) T protein:vir:95 394 NSGTFVMDDGRKNHVPAYMVAVALGGLASGLEIGESITFKPLRVSSLDQIYESIDLDELNENGIISIEFVRNRTNTFFRI 473 (587) T ss_pred ccceEecCCCceeeechHHHHHHHHHHHhcCchhcCccceeeecccccccCCHHHHHHHHhCCeEEEEEecCCcceEEEE Confidence 99988899999999999999999999999999999999999999999999999999999999999999999998889999 Q ss_pred eeceeccCCCCchhhhhhhHHHHHHHHHHHHHHHHHhcCCcccCChHHHHHHHHHHHHHHHHHHhCCcccCCCccccEEe Q lcl|Aclame:pro 456 VQDVTTYNDKSDPVKNEMSVGEANDFLVSELKIELDNNFIGTKVIDTSASLIKNFIQSFLDNKKRAREIQDYTPEEVQVV 535 (569) Q Consensus 456 ~~~itT~~~~~d~~~~~i~v~R~~d~i~~~i~~~~~~~~iGk~nn~~~~~~v~~~i~~~L~~l~~~gaI~~~~~~d~~v~ 535 (569) +++||||+.++|+.|+||+++|++|+|.++||+.++++||||+||+..|..||++|.+||++|+++|+|++|++++++++ T Consensus 474 v~~itT~t~~~d~~~~~i~viRv~D~i~~dir~~~~~~~iGk~nn~~~r~~v~~~i~~~L~~l~~~gaI~~~~~~dv~v~ 553 (587) T protein:vir:95 474 VDDVTTFNDKSDPVKAEMAVGEANDFLVSELKVQLEDQFIGTRTINTSASIIKDFIQSYLGRKKRDNEIQDFPAEDVQVI 553 (587) T ss_pred eecceeccCCCCcchhhhhhhhhHHHHHHHHHHHHHhhCCccccchHHHHHHHHHHHHHHHHHHhCCcccCCCccceEEE Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred cCCCEEEEEEEEEEccceeEEEEEEEEEeeeeeC Q lcl|Aclame:pro 536 LEGDVASISMTVMPIRSLNKITVQLVYKQQILTA 569 (569) Q Consensus 536 ~~~d~~~v~~~v~pv~~~e~I~~ti~v~~~~~~~ 569 (569) .++|+++|++.++|++||||||||++++|+||+| T Consensus 554 ~~~d~~~v~~~v~Pv~~mekI~vt~~~~~~~~~~ 587 (587) T protein:vir:95 554 VEGNEARISMTVYPIRSFKKISVSLVYKQQTLQA 587 (587) T ss_pred ecCCEEEEEEEEEEcccceEEEEEEEEeeeeecC Confidence 9999999999999999999999999999999999 No 6 >protein:vir:96586 Length: 587 # NCBI annotation: ORF011 # Family: family:all:2449 # MgeID: mge:1623 # MgeName: Twort # Cross-refs: genbank:acc:YP_238553;genbank:gi:66391266;genbank:GeneID:5130368 Probab=100.00 E-value=1.7e-148 Score=830.72 Aligned_cols=562 Identities=56% Similarity=0.926 Sum_probs=526.2 Q ss_pred CCCccccCcceecCceEEEEEcCCCccccCCCCceEEEEeccCCCCCceeEEEcChHHHHHHhcCcchHHHHHHHhhhhh Q lcl|Aclame:pro 1 MAVEQFPRKKVSRPHTEITVDTSGIGGSSSSSDKTLMLVGSAKGGKPDTVYRFRNYQQAKQVLRSGDLLDAIELAWNASD 80 (569) Q Consensus 1 ma~~~~~~~~~~~PGvyi~~~~~~~~~~~~~~~~~~~~~g~a~~G~~~~~~~i~~~~~~~~~fg~g~l~~~~~~~~~~~~ 80 (569) ||...|+++.|.||||||+++++++++++++++++++|+|.|++||+++|++|++|+||+++||+|||++||+++|+|+. T Consensus 1 ~~~~~~~~~~~~~Pgv~~~~~~~~~~~~~~~~~~~~~~iG~a~~g~~~~~~~~~~~~~~~~~~g~G~l~~ai~~a~~~~~ 80 (587) T protein:vir:96 1 MAKDIFPRRPIQRPHASIEVDSSGIGGSASNSEKILCLIGKAEGGEPNTVYQVRNYAQAKSVFRSGELLDAIELAWGSNP 80 (587) T ss_pred CeeeeeCCCcccCCceEEEEecCCccCCCCCCCceEEEEEEecCCCCceeEEEcChHHHHHhhcCCcHHHHHHHHhccCc Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999975 Q ss_pred hhccCCceEEEEEcCCCccceeeccceEEEEecCCcccceeEEEEecCCCCcceEEEEEecCCceeeecccccceeEEEe Q lcl|Aclame:pro 81 VNTASAGDILAVRVEDAKNATLTKGGLTFASTIYGVDANEIQVALEDNNLTHTKRLTVAFSKDGYKKVFDNLGKIFSIQY 160 (569) Q Consensus 81 ~~~~g~~~~~~~rv~~~~~a~~~~~~l~~~a~~~G~~gn~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 160 (569) .+|+++||++||+++++|+++.++++++++.+|+|||+||++++++...+++++++.+.+++..+++++++++|.|+| T Consensus 81 --~~g~~~~~a~rv~~~~~a~~~~~~~~~~~~~~g~~~n~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~n~G~v~~i~y 158 (587) T protein:vir:96 81 --QYTAGKILAMRVEDAKASQLEKGGLRVTSKIFGSVSNDIQVALEKNTITDSLRLRVVFQKDNYQEVFDNLGNIFSINY 158 (587) T ss_pred --CCCceEEEEEecCCCccceeecccccccccccCCCCceEEEEEEeccCCCccceEEEEecCCceeeccccCceEEEEe Confidence 579999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred cCcccceeEEEEecCccceeeeeeeccccccccceeeeeccccccccceehhhhhhcccccceeEEecccCCcceecccc Q lcl|Aclame:pro 161 KGSEAQANFTIAQDSISKKATTLTLNVGSEPESTTEVMKYELGQGVYSETNVLVSAINSLPDWEAKFFPIGDKNLPTDAL 240 (569) Q Consensus 161 ~G~~a~a~~~v~~~~~s~~~~~lt~~~~~~~~~~~~v~~~~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 240 (569) +|..+.+.+++.+++.+..+..+.++.+.. +++.||++.+.+.+..+++.+++..|.++++|++.+++.++.+.. T Consensus 159 ~g~~~~a~~~~~~~~~~~~A~~l~l~gg~~-----~v~~yrl~~g~~~~~~~~~~~~~~~~~~tAky~g~~~n~~~v~v~ 233 (587) T protein:vir:96 159 KGEGEKATFSVEKDKETQEAKRLVLKVDEK-----EVKAYELNGGAYSFTNEIITDINELPDFEAKLSPFGDKNLESRKL 233 (587) T ss_pred cccccceeEeeccCcccceeeeeEEEecCc-----eEEEEEeCCCchhhhhhhhhhhccccceEEEeecccCceeEEEee Confidence 999999999999998888887777766533 689999999999999999999999999999999999999999999 Q ss_pred cchhhccccccceeehhhhhhhhhhhccCceEEEE-------------------------eccCccccccceeeeecCCC Q lcl|Aclame:pro 241 EAVTKVDVKTEAVFVGALAGDIAKQLEYNDYVTVA-------------------------VDATKPVEDFELTNLTGGSD 295 (569) Q Consensus 241 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~-------------------------~~~~~~~a~~~~~~LtGG~d 295 (569) |.+...++++...+..+...++......+.++.+. .++.+++++++.+.|+||+| T Consensus 234 d~~~~~~~k~~~~y~~t~~~di~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~aLtGG~d 313 (587) T protein:vir:96 234 DEATDVDIKGKAVYVKAVFGDIENQTQYNQYVKFEQLPEQASEPSDVEVHAETESATVTATSKPKAIEPFELTKLSGGTN 313 (587) T ss_pred ccccccccceEEEeehhhhhhhhhhhccccceeeccccchhhhhhcccccccccceeeeecccccccccccceeeecCCC Confidence 98888888877666666555555544444333321 22344566777788999999 Q ss_pred CCchhHHHHHHHHHHhcCccEEEecCCCHHHHHHHHHHHHHHhcCCCeEEEEEcCCCCCCHHHHHHHhhhcCCceEEEEe Q lcl|Aclame:pro 296 GTAPESWANKFPLLANEGGYYLVPLTDKQAVHSEALAFVKDRTDNGDPMRIIVGGGTNETVEESITRATNLRDPRASLVG 375 (569) Q Consensus 296 g~~~~~~~~~l~~le~~~~~~i~~~~~d~~v~~~l~~~v~~~~~~g~~~~~vv~~~~~~~~~~~~~~a~~~n~~~v~~v~ 375 (569) |+++.+|+++|++|+.+++++|+++++++++|+++++||++||++|++|++|++++.++++++++++++.||++|+++++ T Consensus 314 G~~~~~y~~~l~ale~~~~~~i~~~t~d~ai~~~l~a~vk~~r~~gk~~~aVlg~~~~~~~~~~~~~a~~~n~e~vi~v~ 393 (587) T protein:vir:96 314 GEPPTSWSAKLEKFKNEGGYYIVPLTDRQSVHSEVATFVKNRSDAGEPMRAIVGGGTSETKEKLFGRQAILNNPRVALVA 393 (587) T ss_pred CCCcccHHHHHHHHhhCCcEEEEecCCCHHHHHHHHHHHHHHHhCCCeEEEEecCCCCCCHHHHHHHHhhcCCCcEEEEe Confidence 99988999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred ccceeccCCcceeeechHHHHHHHHHHhhcCchhcCccceeeccccccccCCHHHHHHHHhcCcEEEEEecCCcceEEEE Q lcl|Aclame:pro 376 FSGTRKMDDGRLLKLPGYMMASQIAGIASGLEVGEAITFKHFNVTSVDRVFESSQLDMLNESGVISIEFVRNRTLTAFRV 455 (569) Q Consensus 376 ~~~~~~~~~g~~~~~~~~~~aa~vAG~~A~~~~~~s~T~~~~~~~~~~~~~t~~e~~~l~~~Gv~~l~~~~~~~~~~~ri 455 (569) +++.....+++...+|++++|+|+||++|++++++||||++++++++.++|+++|+++|+++|+++|++++++..+.+|+ T Consensus 394 ~~~~~~~~~~~~~~~~~~~~aa~vAG~~Ag~~~~~S~T~~~~~~~~v~~~~t~~e~~~~i~~G~~~l~~~~~~~~~v~~~ 473 (587) T protein:vir:96 394 NSGKFVMGNGRILQAPAYMVASAVAGLVSGLDIGESITFKPLFVNSLDKVYESEELDELNENGIITIEFVRNRMTTMFRI 473 (587) T ss_pred cceEEecCCCceeeechhhHHHHHHHHHhcCccccCccceeeecccccccCCHHHHHHHHhCCeEEEEEecCCcEEEEEe Confidence 99888788888899999999999999999999999999999999999999999999999999999999999998899999 Q ss_pred eeceeccCCCCchhhhhhhHHHHHHHHHHHHHHHHHhcCCcccCChHHHHHHHHHHHHHHHHHHhCCcccCCCccccEEe Q lcl|Aclame:pro 456 VQDVTTYNDKSDPVKNEMSVGEANDFLVSELKIELDNNFIGTKVIDTSASLIKNFIQSFLDNKKRAREIQDYTPEEVQVV 535 (569) Q Consensus 456 ~~~itT~~~~~d~~~~~i~v~R~~d~i~~~i~~~~~~~~iGk~nn~~~~~~v~~~i~~~L~~l~~~gaI~~~~~~d~~v~ 535 (569) ++++|||+.++++.|+||+++|++|+|.++||+.++++||||+||+.+|.+||++|.+||++|+++|+|++|++++++++ T Consensus 474 vnsitT~t~~~~~~~~~i~virv~D~i~~di~~~~~~~yiGk~nn~~~r~~v~~~i~~~L~~l~~~g~I~~~~~~dv~v~ 553 (587) T protein:vir:96 474 VDDVTTFPDKNDPVKSEMALGEANDFLVSELKILLEEQYIGTRTINTSASQIKDFVQSYLGRKKRDNEIQDFPPEDVQVI 553 (587) T ss_pred eccceecCCCCCchhhhhhhHHHHHHHHHHHHHHHHhcCCccccCHHHHHHHHHHHHHHHHHHHhCCcccCCCccceEEE Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred cCCCEEEEEEEEEEccceeEEEEEEEEEeeeeeC Q lcl|Aclame:pro 536 LEGDVASISMTVMPIRSLNKITVQLVYKQQILTA 569 (569) Q Consensus 536 ~~~d~~~v~~~v~pv~~~e~I~~ti~v~~~~~~~ 569 (569) .++|+++|++.++|++||||||||++++|+|++| T Consensus 554 ~~~D~~~v~~~v~Pv~~mekIy~tv~~~~~~~~~ 587 (587) T protein:vir:96 554 IEGNEARISLTIFPIRALKKISVSLVYRQQTLQA 587 (587) T ss_pred ecCCEEEEEEEEEEcccceEEEEEEEEEeeeecC Confidence 9999999999999999999999999999999999 No 7 >protein:vir:100829 Length: 607 # NCBI annotation: hypothetical protein # Family: family:all:2449 # MgeID: mge:1633 # MgeName: LP65 # Cross-refs: genbank:acc:YP_164738;genbank:gi:56693151;genbank:GeneID:3197462 Probab=100.00 E-value=6.8e-143 Score=799.99 Aligned_cols=564 Identities=36% Similarity=0.603 Sum_probs=513.8 Q ss_pred CC------Cc---cccCcceecCceEEEEEcCCCccccCCCCceEEEEeccCCCCCceeEEEcChHHHHHHhcCcchHHH Q lcl|Aclame:pro 1 MA------VE---QFPRKKVSRPHTEITVDTSGIGGSSSSSDKTLMLVGSAKGGKPDTVYRFRNYQQAKQVLRSGDLLDA 71 (569) Q Consensus 1 ma------~~---~~~~~~~~~PGvyi~~~~~~~~~~~~~~~~~~~~~g~a~~G~~~~~~~i~~~~~~~~~fg~g~l~~~ 71 (569) |. .+ .|+++++.|||||++++++++++++++++++++|||.|++||+++|++|++|+|||++||+|||++| T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~pgv~~~~~~~~~~~~~~~~~~~~~~iG~a~~G~~~~~~~~~~~~~a~~~f~~g~l~~a 80 (607) T protein:vir:10 1 MTTTITSAESYKRIYPLFYDSRPHVETNFDDSRLSNTASDSAKNIFMLGSATNGDPTKVYEIRTSQQATKIFGSGDLVDG 80 (607) T ss_pred CcceecchhhHHHHhCCCCccCCceEEEEecCcCcCCCCCCcceEEEEEEeCCCCCceEEEEcchhHHHHhhcCcchHHH Confidence 43 22 7999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred HHHHhhhhhhhccCCceEEEEEcCCCccceeeccceEEEEecCCcccceeEEEEecCCCCcceEEEEEecCCceeeeccc Q lcl|Aclame:pro 72 IELAWNASDVNTASAGDILAVRVEDAKNATLTKGGLTFASTIYGVDANEIQVALEDNNLTHTKRLTVAFSKDGYKKVFDN 151 (569) Q Consensus 72 ~~~~~~~~~~~~~g~~~~~~~rv~~~~~a~~~~~~l~~~a~~~G~~gn~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (569) +++||.|+.++.+||+.||++|++++++|+++.++++++++.+|+|||+||+++ ++...+.+++++.|.++++.+++++ T Consensus 81 ~~~a~~~~~~~~~g~~~~~~~rv~~~~~a~~~~~~~~~~~~~~~~~~~~i~~~l-~~~~~~~~~~~~~~~~d~~~~~~~n 159 (607) T protein:vir:10 81 IKLAFDPTGNSVTNGGTVYALRVDNAKQASLVKDGLTFTSSIFGTNANQVSVAL-DNDVFGVPRITVNYSPDNYERTYTN 159 (607) T ss_pred HHHhhccccCCccCCceEEEEeCCCccccceecccccccccccccCCCceEEEE-EecCCCccceeEEeecccceeeeee Confidence 999999999999999999999999999999999999999999999999999999 6888999999999999999999999 Q ss_pred ccceeEEEecCcccceeEEEEecCccceeeeeeeccccccccceeeeeccccccccceehhhhhhcccccceeEEecccC Q lcl|Aclame:pro 152 LGKIFSIQYKGSEAQANFTIAQDSISKKATTLTLNVGSEPESTTEVMKYELGQGVYSETNVLVSAINSLPDWEAKFFPIG 231 (569) Q Consensus 152 ~~~~~~v~~~G~~a~a~~~v~~~~~s~~~~~lt~~~~~~~~~~~~v~~~~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 231 (569) ++++|.|+|+|.++.+.+++..+. ....+.|+++.+.+.+..++|..|+|..+.|.++.+++.+|+.+|+|++++.+ T Consensus 160 ~g~~~~i~y~g~~~~a~~~v~~~~-~g~~~~lt~~~~~~~~~~~~V~~~~l~~~~~~t~~~l~~din~~~~~~A~~~g-- 236 (607) T protein:vir:10 160 IGQMFSITYSGKSASAGYTVSHDT-DGKAILLTLGSGDSIDKLTNVATFDLTMSKYDTIAKLMQAISATPNFSASVVG-- 236 (607) T ss_pred ccceeecccCcccccccceeeecC-CCceeEEEecCCCccceeeeeecccccccccchHHHHHHHhhcCCceEEEEec-- Confidence 999999999999999999998664 45678899999999998999999999999999999999999999999999974 Q ss_pred Ccceecccccchh-hccccccceeehhhhhhhhhhhccCceEEEEe------------------------ccCccccccc Q lcl|Aclame:pro 232 DKNLPTDALEAVT-KVDVKTEAVFVGALAGDIAKQLEYNDYVTVAV------------------------DATKPVEDFE 286 (569) Q Consensus 232 ~~~~~~~~~d~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~------------------------~~~~~~a~~~ 286 (569) +..+++++.|... +..++.....+.+...+++.......|+.+.. .+.+.+++++ T Consensus 237 ~~~i~tky~d~~~~~i~V~~~~~iv~a~~~D~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~a 316 (607) T protein:vir:10 237 SPSVNTSYLDEVTSPVDVKTAPAVVTAKIGDAISKLGYDPYVVVTQTSNNKPIVNGVSAGTGSATASVTTAPESFPANFD 316 (607) T ss_pred ccceeeeccccccceeEEEEeeeeechhhhhhhhcccccceEEeeecccchhhhhhhhccccceeeeeeccccccccccc Confidence 4456777776653 44555555555555555554444444443321 2335567788 Q ss_pred eeeeecCCCCCchhHHHHHHHHHHhcCccEEEecCCCHHHHHHHHHHHHHHhcCCCeEEEEEcCCCCCCHHHHHHHhhhc Q lcl|Aclame:pro 287 LTNLTGGSDGTAPESWANKFPLLANEGGYYLVPLTDKQAVHSEALAFVKDRTDNGDPMRIIVGGGTNETVEESITRATNL 366 (569) Q Consensus 287 ~~~LtGG~dg~~~~~~~~~l~~le~~~~~~i~~~~~d~~v~~~l~~~v~~~~~~g~~~~~vv~~~~~~~~~~~~~~a~~~ 366 (569) .+.|+||+||+++.+|+++|++|+.++++++++++.|+++|+++++||++||++|++|++|++++.++++++++++++.| T Consensus 317 ~~~LtGGtdG~~~~ty~dal~aLe~~e~~~i~~~t~d~ai~~~l~a~vkr~~~~g~~~~aVlg~~~~~t~~~~~t~a~~~ 396 (607) T protein:vir:10 317 TAFLTGGSTGDVPVSWADKFNGAIGNNVYYIIPLTSEENIHAELQAFIDEQHVLGYNYHAFVGGGFAEPLEQILSRQVNI 396 (607) T ss_pred eeeeeCCCCCCchhhHHHHHHHHhhcCceEEEecCCCHHHHHHHHHHHHHHHhCCCcEEEEecCCCCCCHHHHHHHHHhh Confidence 89999999999988999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred CCceEEEEeccceeccCCcceeeechHHHHHHHHHHhhcCchhcCccceeeccccccccCCHHHHHHHHhcCcEEEEEec Q lcl|Aclame:pro 367 RDPRASLVGFSGTRKMDDGRLLKLPGYMMASQIAGIASGLEVGEAITFKHFNVTSVDRVFESSQLDMLNESGVISIEFVR 446 (569) Q Consensus 367 n~~~v~~v~~~~~~~~~~g~~~~~~~~~~aa~vAG~~A~~~~~~s~T~~~~~~~~~~~~~t~~e~~~l~~~Gv~~l~~~~ 446 (569) |++|+++++|++.. ..+|+...+|++++|+|+||++|++++++||||++++++++.++|+++|+++|+++|+++|++++ T Consensus 397 N~ervv~V~~~~~~-~~~G~~~~~~~~~~Aa~vAGl~Ag~~~~~SlT~k~i~~~~v~~~lt~~e~e~ai~~Gv~~l~~~~ 475 (607) T protein:vir:10 397 NDSRFGLVGQSGHV-QEGGESVHVPAYLMAAYVGGLSSSLGVAVPITNKKLALVDLDQNFSGDDLNTLNQNGVIGIEHLV 475 (607) T ss_pred CCCcEEEEecCeeE-eeCCcceeccHHHHHHHHHHHHhcCccccCcccceeccccccccCCHHHHHHHHhCCeEEEEEcc Confidence 99999999998754 45678889999999999999999999999999999999999999999999999999999999986 Q ss_pred CCc-ceEEEEeeceeccCCCCchhhhhhhHHHHHHHHHHHHHHHHHhcCCcccCChHHHHHHHHHHHHHHHH--HHhCCc Q lcl|Aclame:pro 447 NRT-LTAFRVVQDVTTYNDKSDPVKNEMSVGEANDFLVSELKIELDNNFIGTKVIDTSASLIKNFIQSFLDN--KKRARE 523 (569) Q Consensus 447 ~~~-~~~~ri~~~itT~~~~~d~~~~~i~v~R~~d~i~~~i~~~~~~~~iGk~nn~~~~~~v~~~i~~~L~~--l~~~ga 523 (569) ++. +.++||+++||||+..+++.|++|+++|++|+|.++||+.++++||||+||+..|.+++..+..+|.. |+..|+ T Consensus 476 ~~~~~~~vrIv~~ItT~t~~~~~~~~~i~viRv~D~i~~dir~~~~~~yIGk~nnd~~~~~vk~~i~~~L~~~~l~~~ga 555 (607) T protein:vir:10 476 NRNATGGYYIVQDVSTNTVSSSHVDGSLYLGELTDFLFDNLRFVLRDTYIGSNIRSTSADDIKSTVASYLYSEMNNDDGL 555 (607) T ss_pred CccccceEEEeeeeeeccCCCCcchheeehhhhHHHHHHHHHHHHhhcCCcccCCcchHHHHHHHHHHHHHHHHHHhcCc Confidence 653 45689999999999999999999999999999999999999999999999999999999999999864 555799 Q ss_pred ccCCCccccEEecCCCEEEEEEEEEEccceeEEEEEEEEEeeeeeC Q lcl|Aclame:pro 524 IQDYTPEEVQVVLEGDVASISMTVMPIRSLNKITVQLVYKQQILTA 569 (569) Q Consensus 524 I~~~~~~d~~v~~~~d~~~v~~~v~pv~~~e~I~~ti~v~~~~~~~ 569 (569) |++|+++|++++.++|+++|++.++|+++|||||||++++|++|+| T Consensus 556 I~df~~edv~v~~~~D~v~v~~~v~Pv~~iekIyvtv~v~~~~~~~ 601 (607) T protein:vir:10 556 IVDFSESDIVVTISGTVVYIQFAVAPTQEIKNIVVSGTYSNYSATS 601 (607) T ss_pred eeCCCccccEEeeCCCEEEEEEEEEEcccceEEEEEEEEEEEEEee Confidence 9999999999999999999999999999999999999999999999 No 8 >protein:vir:102819 Length: 648 # NCBI annotation: tail sheath protein # Family: family:all:2449 # MgeID: mge:1610 # MgeName: YS40 # Cross-refs: genbank:acc:YP_874082;genbank:gi:118197689;genbank:GeneID:4496011 Probab=100.00 E-value=3.4e-110 Score=620.76 Aligned_cols=550 Identities=19% Similarity=0.236 Sum_probs=431.0 Q ss_pred CCCcc-ccCcceecCceEEEEEcCCCccccCCCCceEEEEeccCCCCCceeEEEcChHHHHHHhcCcchHHHHHHHhhhh Q lcl|Aclame:pro 1 MAVEQ-FPRKKVSRPHTEITVDTSGIGGSSSSSDKTLMLVGSAKGGKPDTVYRFRNYQQAKQVLRSGDLLDAIELAWNAS 79 (569) Q Consensus 1 ma~~~-~~~~~~~~PGvyi~~~~~~~~~~~~~~~~~~~~~g~a~~G~~~~~~~i~~~~~~~~~fg~g~l~~~~~~~~~~~ 79 (569) ||... |++++..|||||||+.++|.++++++++++++|||.+++||+++|++|+||+||+++||+|+|.+|+++|| T Consensus 1 ma~~~yf~~~~~~~PGVyvee~~sg~~~i~gv~tsva~fvG~a~~Gp~~~p~~v~s~~~~~~~fggg~l~~av~~~F--- 77 (648) T protein:vir:10 1 MAISVYFDGKLIKQLGAYVKTDLSAVKQINGVGTGIVALLGLAEGGETYKPYRLTSFAEAVSIFKGGPLLEHIKAAF--- 77 (648) T ss_pred CeeeeeeCCCCccCCceEEEEeccccccccCCCCceEEEEEeeCCCCCceeEEecCHHHHHHHhcCccHHHHHHHHH--- Confidence 99998 79999999999999999999999999999999999999999999999999999999999999999999998 Q ss_pred hhhccCCceEEEEEcCCCccceeeccceEEEEecCCcccceeE--EEEecCCCCcceEEEEEecCCceeeecccccceeE Q lcl|Aclame:pro 80 DVNTASAGDILAVRVEDAKNATLTKGGLTFASTIYGVDANEIQ--VALEDNNLTHTKRLTVAFSKDGYKKVFDNLGKIFS 157 (569) Q Consensus 80 ~~~~~g~~~~~~~rv~~~~~a~~~~~~l~~~a~~~G~~gn~i~--v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (569) .|||++||++|++++++|+++.++++++|+.+|.|||+|+ +.++++...++.++++.+..+. ++++++ +|. T Consensus 78 ---~nGg~~~~~vRv~~~~~a~~~~~~~~~~a~~~g~~gn~i~~~v~~~~~~~~~~~~l~v~~~~~~--~~~d~~--v~~ 150 (648) T protein:vir:10 78 ---IGGAGEVVAVRIGNPTTASVSIPVAQNTSDTSPANLNFVSYEASTRSNQIYVSFDLDENFTSAN--EADDTI--IFT 150 (648) T ss_pred ---hCCCcEEEEEEcCCCcccceecceeEEeecccCCCCCceEEEEEEcCCCcCceeEEEEEecCCC--ccccee--EEE Confidence 6999999999999999999999999999999999999986 6667888889999999886654 455554 455 Q ss_pred E-----EecCcccceeEEEEecCccc--eeeeeeeccccccccceeeeeccccccccceehhhhhhcccccc--eeEEec Q lcl|Aclame:pro 158 I-----QYKGSEAQANFTIAQDSISK--KATTLTLNVGSEPESTTEVMKYELGQGVYSETNVLVSAINSLPD--WEAKFF 228 (569) Q Consensus 158 v-----~~~G~~a~a~~~v~~~~~s~--~~~~lt~~~~~~~~~~~~v~~~~l~~~~~~~~~~~~~~i~~~~~--~~~~~~ 228 (569) + +|+|.+..+++.+..+..+. ....++++.+.. .+..+.+.+ .....+.++.++.... ..+... T Consensus 151 i~~~~~~y~gt~~~~t~~v~~~~~~~~~~~~~~~~~~~~~-----~v~~~~~~~--~~~~~~~v~~~~~~~~~~~~~~~~ 223 (648) T protein:vir:10 151 IYQKHPDFSVTRETFTFPRKFTTPTVLVKRGSTLFFVDRS-----IVNAALAAG--PAFQTALINLLKEQLQPTDVVQIF 223 (648) T ss_pred eccCCCcccccceeccccccccccccccccccceeecCcc-----chhhhhccC--ccchhhhhhchhhhhhhhhhheec Confidence 5 68888888888776554322 112222333321 112222222 2234444555444422 222221 Q ss_pred ccC-----Ccceecccccchhhcccc-ccceeehhhhhhhhhhhccCceEEEEecc------------------------ Q lcl|Aclame:pro 229 PIG-----DKNLPTDALEAVTKVDVK-TEAVFVGALAGDIAKQLEYNDYVTVAVDA------------------------ 278 (569) Q Consensus 229 ~~~-----~~~~~~~~~d~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~v~~~~~~------------------------ 278 (569) +.. +........+.+...... ++...+....+++...+..+.++.+...+ T Consensus 224 ~~s~~~~~d~~~~~~~~~a~~~~~~~~~~~~~~~~~~gd~~~~~~~~~~~~~~~tp~~~~~~~~~~~~~~~~~~~~~v~~ 303 (648) T protein:vir:10 224 DASDTNPVDIPLGLFVYEVLYGGLFGFTKSRLVKTSFGTVDDLLSNPLLFNLSATPFFDGSDYQDYTSLSDPANWFAKDA 303 (648) T ss_pred ccccccccccccccccccccchhhhcCCcchhhhhhhccccccccccceecccccccccccceeeeeccccccceeeeec Confidence 111 111222233333322222 22223344455555555544444332110 Q ss_pred -----------CccccccceeeeecCCCCCch------------hHHHHHHHHHHhcCccEEEe-------------cCC Q lcl|Aclame:pro 279 -----------TKPVEDFELTNLTGGSDGTAP------------ESWANKFPLLANEGGYYLVP-------------LTD 322 (569) Q Consensus 279 -----------~~~~a~~~~~~LtGG~dg~~~------------~~~~~~l~~le~~~~~~i~~-------------~~~ 322 (569) .....+...+.|+||+||+.+ .||+++|+.|++++.+++++ +++ T Consensus 304 ~~~~~l~~~~~~p~~~~~~~t~L~GGtdG~~p~s~~~~~~~~~~~d~~d~l~~~~~~~~~~ivp~~~~~~~~~~~~~lt~ 383 (648) T protein:vir:10 304 YTINHLVDTTINPHILATRIFSLSGGTNGDDGTGYYQTAVSNYINIWSQGLATLEEEEVNFVIPAYKFTNVTQLNDRLTI 383 (648) T ss_pred cchhhcccccccCcccccccceecccccCCCcccccccccccchhhHHHHhhhccCCCceEEEeecccccccccccccCC Confidence 001122335679999999887 46999999999999999998 678 Q ss_pred CHHHHHHHHHHHHHHhcC-----CCeEEEEEcCCCCCCHH--HHHHHhhhcCCceEEE----------EeccceeccCCc Q lcl|Aclame:pro 323 KQAVHSEALAFVKDRTDN-----GDPMRIIVGGGTNETVE--ESITRATNLRDPRASL----------VGFSGTRKMDDG 385 (569) Q Consensus 323 d~~v~~~l~~~v~~~~~~-----g~~~~~vv~~~~~~~~~--~~~~~a~~~n~~~v~~----------v~~~~~~~~~~g 385 (569) .+++|+++.+||++|+.+ +..+++++++.++++.. +.+.++..+|+++... +..+..+.+.+| T Consensus 384 ~q~i~a~a~shv~~~s~~~~~~~r~~~~~~vg~~~~es~~~se~~~~~~~~~~~~a~~~~~d~~~~~~~~~~~~~~~~~G 463 (648) T protein:vir:10 384 FKGIASTFLSHVQTMSQVNRRKARVGVFGLPAPSPNESVTASEYLYNRNILNTISAMFGGTDRAQAVVFPFYSNVFNDEG 463 (648) T ss_pred ccchHHHHHHHHHHhhhccccccccCeEEEeCCCCchhHHHHHHHhhhhcccccceeeeecCCceEEeecccceeECCCC Confidence 899999999999998643 44678889999888763 4455666677765433 222344567788 Q ss_pred ceeeechHHHHHHHHHHhhcCchhcCccceeeccccccc--cCCHHHHHHHHhcCcEEEEEecCCcc-eEEEEeeceecc Q lcl|Aclame:pro 386 RLLKLPGYMMASQIAGIASGLEVGEAITFKHFNVTSVDR--VFESSQLDMLNESGVISIEFVRNRTL-TAFRVVQDVTTY 462 (569) Q Consensus 386 ~~~~~~~~~~aa~vAG~~A~~~~~~s~T~~~~~~~~~~~--~~t~~e~~~l~~~Gv~~l~~~~~~~~-~~~ri~~~itT~ 462 (569) +...+|+|++||+|||++|+.++++|||||++++.+++. +|+++|+|+|+++|++||++++++.+ .++||+++|||+ T Consensus 464 ~~~~~p~~~~Aa~VAGl~a~l~~~~s~T~k~i~~~~id~~~~~t~~qld~L~~~Gv~~ie~~~~~~~~~~~rvv~gITT~ 543 (648) T protein:vir:10 464 KVELLGGEFFASYVAGMHANREPQDSITFLPISGIGAEPLYNWTYTQKDDLISNRVLFVEKVKTSFGGIVYRIHHNPTTW 543 (648) T ss_pred cEEecchhhHHHHHHhhhhccccccCcccceeeccccccccCCCHHHHHHHhcCCcEEEEEecCCcceeeEEEeccceee Confidence 888899999999999999999999999999999887775 89999999999999999999988765 479999999999 Q ss_pred CCCCchhhhhhhHHHHHHHHHHHHHHHHHhcCCcccCChHHHHHHHHHHHHHHHHHHhCCcccCCCccccEEecCCCEEE Q lcl|Aclame:pro 463 NDKSDPVKNEMSVGEANDFLVSELKIELDNNFIGTKVIDTSASLIKNFIQSFLDNKKRAREIQDYTPEEVQVVLEGDVAS 542 (569) Q Consensus 463 ~~~~d~~~~~i~v~R~~d~i~~~i~~~~~~~~iGk~nn~~~~~~v~~~i~~~L~~l~~~gaI~~~~~~d~~v~~~~d~~~ 542 (569) +.++++.|++|+++|+.|++...||+.++++|||++|++..|.++|+.|.+||.++++.++|++|++.+++++.++|+++ T Consensus 544 ~~~~~~~~~eisv~ri~D~l~~~vr~~l~~~fIG~~n~~~~~~~ik~~i~~~L~~~~~~~~I~~y~~~~v~~~~~~~vv~ 623 (648) T protein:vir:10 544 LGPVTQGFQEFVLRRIDDFLQSYVYKNLQEQFIGRKSYGRKTENDIKVYTEALLSNLVGKQIVAYKDVKVTSNEDKTVYY 623 (648) T ss_pred cCCCCcceeeeeeeehhhHHHHHHHHHHhhhcCcccccHHHHHHHHHHHHHHHhhHhhcCcccCcccceEEEEecCCEEE Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999899999 Q ss_pred EEEEEEEccceeEEEEEEEEEeeee Q lcl|Aclame:pro 543 ISMTVMPIRSLNKITVQLVYKQQIL 567 (569) Q Consensus 543 v~~~v~pv~~~e~I~~ti~v~~~~~ 567 (569) |+++++|++||+||++|+++.++-- T Consensus 624 V~~~v~Pv~~i~~I~vti~it~~~~ 648 (648) T protein:vir:10 624 VEFFYQPVTEIKFILVTMKVTFDLE 648 (648) T ss_pred EEEEEEecceeeEEEEEEEEEeccC Confidence 9999999999999999999999855 No 9 >protein:vir:102957 Length: 437 # NCBI annotation: sheath tail protein # Family: family:all:632 # MgeID: mge:1461 # MgeName: EJ-1 # Cross-refs: genbank:acc:NP_945292;genbank:gi:39653727;uniprot:Q708M0;genbank:GeneID:2672871 Probab=100.00 E-value=2.1e-107 Score=605.48 Aligned_cols=427 Identities=15% Similarity=0.193 Sum_probs=356.0 Q ss_pred CCCccccCcceecCceEEEEEcCCCccccCCCCceEEEEeccCCCCCceeEEEcChHHHHHHhcCcchHHHHHHHhhhhh Q lcl|Aclame:pro 1 MAVEQFPRKKVSRPHTEITVDTSGIGGSSSSSDKTLMLVGSAKGGKPDTVYRFRNYQQAKQVLRSGDLLDAIELAWNASD 80 (569) Q Consensus 1 ma~~~~~~~~~~~PGvyi~~~~~~~~~~~~~~~~~~~~~g~a~~G~~~~~~~i~~~~~~~~~fg~g~l~~~~~~~~~~~~ 80 (569) ||||+|.+|||+||||||||.+++.++++++++++++|+|.++|||+++|++|+|++||++.||+. . ++ .++.+.+ T Consensus 1 m~gg~~~~~~k~~PGvYi~~~~~~~~~i~~~~~~~~a~~~~~~~Gp~~~~~~i~s~~d~~~~fG~~-~-~~--~~~~~~~ 76 (437) T protein:vir:10 1 MAGGIWKRQNKVRPGAYINVKSKDIAMTRLGGDGVVTVPLALSFGQSKKLMKIRRGEDLFKKLGYE-Q-ES--PQLLLLN 76 (437) T ss_pred CCcceecccceecCceeEEEecCCcceeeccCCcEEEEEEEecCCCCceeEEEecHHHHHHHcCCc-c-ch--hHHHHHH Confidence 999999999999999999999999999999999999999999999999999999999999999962 2 11 1233455 Q ss_pred hhccCCceEEEEEcCCCccceeec-cceEEEEecCCcccceeEEEEecCCCCcceEEEEEecCCceeeecccccceeEEE Q lcl|Aclame:pro 81 VNTASAGDILAVRVEDAKNATLTK-GGLTFASTIYGVDANEIQVALEDNNLTHTKRLTVAFSKDGYKKVFDNLGKIFSIQ 159 (569) Q Consensus 81 ~~~~g~~~~~~~rv~~~~~a~~~~-~~l~~~a~~~G~~gn~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 159 (569) ++++|+++||+||++++.+|+.+. ++++++|++||.|||+|+|.++++.++.++..... T Consensus 77 ~~~~g~~~~~~~R~~~g~~a~~tl~~~~~~~A~~~G~~gn~i~v~v~~~~~d~~~~~v~~-------------------- 136 (437) T protein:vir:10 77 EAFKRVSEVLLYRLNTGEKANVSLSDNVTAQAKYSGVRGNDITVTVKTNVDDPSSFDVVT-------------------- 136 (437) T ss_pred HHhcCCCEEEEEECCCCceeeEeeccceEEEeccCCcccceeEEEEeeccCCccceEEEE-------------------- Confidence 667899999999999999998875 57999999999999999999987754433211100 Q ss_pred ecCcccceeEEEEecCccceeeeeeeccccccccceeeeeccccccccceehhhhhhcccccceeEEecccCCcceeccc Q lcl|Aclame:pro 160 YKGSEAQANFTIAQDSISKKATTLTLNVGSEPESTTEVMKYELGQGVYSETNVLVSAINSLPDWEAKFFPIGDKNLPTDA 239 (569) Q Consensus 160 ~~G~~a~a~~~v~~~~~s~~~~~lt~~~~~~~~~~~~v~~~~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 239 (569) |.+. ..+-.+. . T Consensus 137 ~~~~-------------------------------~~~d~~~-----v-------------------------------- 148 (437) T protein:vir:10 137 FLDT-------------------------------VVMDLQT-----V-------------------------------- 148 (437) T ss_pred ecCc-------------------------------ceeeeee-----h-------------------------------- Confidence 0000 0000000 0 Q ss_pred ccchhhccccccceeehhhhhhhhhhhccCceEEEEeccCccccccceeeeecCCCCCch-hHHHHHHHHHHhcCccEEE Q lcl|Aclame:pro 240 LEAVTKVDVKTEAVFVGALAGDIAKQLEYNDYVTVAVDATKPVEDFELTNLTGGSDGTAP-ESWANKFPLLANEGGYYLV 318 (569) Q Consensus 240 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~a~~~~~~LtGG~dg~~~-~~~~~~l~~le~~~~~~i~ 318 (569) .....+..+.|+.+ .+++++++++++.|+||+||+++ ++|.++|++||.+++++++ T Consensus 149 ---------------------~~~~~~~~n~~v~~--~~~~~l~~~a~~~LtGG~dg~~t~~dy~~al~~le~~~~n~l~ 205 (437) T protein:vir:10 149 ---------------------KVLADLKNNALVEF--SGTGELQPVAGAKLTGGTDGAISTQDYLEYFKALETVEFNYMA 205 (437) T ss_pred ---------------------hhhhhhhhhccccc--ccccccccccceeeeccccCCCChhHHHHHHHHhccCcceEEE Confidence 00011112333432 35666778888999999999875 6899999999999999999 Q ss_pred ecCCCHHHHHHHHHHHHHHhcC-CCeEEEEEcCCCCCCHHHHHHHhhhcCCceEEEEeccceeccCCcceeeechHHHHH Q lcl|Aclame:pro 319 PLTDKQAVHSEALAFVKDRTDN-GDPMRIIVGGGTNETVEESITRATNLRDPRASLVGFSGTRKMDDGRLLKLPGYMMAS 397 (569) Q Consensus 319 ~~~~d~~v~~~l~~~v~~~~~~-g~~~~~vv~~~~~~~~~~~~~~a~~~n~~~v~~v~~~~~~~~~~g~~~~~~~~~~aa 397 (569) +++.++++|+++++|||+||++ |+++++|+++.. .|+|+++++.++++.. ++ ..++++++|+ T Consensus 206 ~~~~d~~~~t~~~~~ik~~r~~~g~~~~~V~~~~~-------------~d~e~Iin~~n~~~~~--~~--~~~~~~~~~a 268 (437) T protein:vir:10 206 LPVEDASIKKAAINFIKRMREDEGLGAQLVVADSD-------------ADSEAVINVKNGVILS--DK--TVIDKTKATV 268 (437) T ss_pred ecCCChhHHHHHHHHHHHHHhccCceEEEEeCCCC-------------CCCceEEEeecceeec--Cc--ceechhhHHH Confidence 9999999999999999999986 777778887542 3689999999986642 33 3688999999 Q ss_pred HHHHHhhcCchhcCccceeecc-ccccccCCHHHHHHHHhcCcEEEEEecCCcceEEEEeeceeccC---CCCchhhhhh Q lcl|Aclame:pro 398 QIAGIASGLEVGEAITFKHFNV-TSVDRVFESSQLDMLNESGVISIEFVRNRTLTAFRVVQDVTTYN---DKSDPVKNEM 473 (569) Q Consensus 398 ~vAG~~A~~~~~~s~T~~~~~~-~~~~~~~t~~e~~~l~~~Gv~~l~~~~~~~~~~~ri~~~itT~~---~~~d~~~~~i 473 (569) |+||++|++++++|+||++++. .++.++|+++|+++|+++|+++|+++ ++.+||+++|||++ ..++++|+|| T Consensus 269 ~vAG~~Ag~~~~~S~t~~~~~~~~~v~~~~t~~e~~~~i~~G~~vl~~~----~~~v~i~~gInTltt~~~~~~~~~~ki 344 (437) T protein:vir:10 269 WVAAASANAGVEKSLTYEKYEDSVDVVGRLSHTETEDALLKGQFVFTAR----RGRAVVEQDINSHVSFTIEKNQDFRKN 344 (437) T ss_pred HHHHHhccCccccCccccccCCcccccccCCHHHHHHHHhCCcEEEEEe----CCeEEEEEccccccccCCCCCchhhhh Confidence 9999999999999999999984 68999999999999999999999753 45689999998765 5678999999 Q ss_pred hHHHHHHHHHHHHHHHHHhcCCccc-CChHHHHHHHHHHHHHHHHHHhCCcccCCCccccEEe--cCCCEEEEEEEEEEc Q lcl|Aclame:pro 474 SVGEANDFLVSELKIELDNNFIGTK-VIDTSASLIKNFIQSFLDNKKRAREIQDYTPEEVQVV--LEGDVASISMTVMPI 550 (569) Q Consensus 474 ~v~R~~d~i~~~i~~~~~~~~iGk~-nn~~~~~~v~~~i~~~L~~l~~~gaI~~~~~~d~~v~--~~~d~~~v~~~v~pv 550 (569) +++|++|+|.++|+++|++.||||. |++..|.+|+++|.+||++|+++|+|++|+.+|+++. ..+|.+++++.++|+ T Consensus 345 ~vir~~D~i~~di~~~~~~~yiGk~~N~~~~r~~~~~~i~~yl~~l~~~g~I~~~~~~d~~v~~~~~~~~v~v~~~v~~~ 424 (437) T protein:vir:10 345 RILRTLDDIVNDTRYAFSEYFLGKVSNNEDGRQAFKANRIRYFKDLEARGAIEDFKVEDIEVLRGELKESVVVNVKVKPV 424 (437) T ss_pred hHHHHHHHHHHHHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCceeEEeecCCCCCEEEEEEEEEEe Confidence 9999999999999999999999995 7778899999999999999999999999999998886 357899999999999 Q ss_pred cceeEEEEEEEEE Q lcl|Aclame:pro 551 RSLNKITVQLVYK 563 (569) Q Consensus 551 ~~~e~I~~ti~v~ 563 (569) ++||||||+|.+. T Consensus 425 dame~iy~ti~v~ 437 (437) T protein:vir:10 425 DSMEKLYMTVTVE 437 (437) T ss_pred eeeeeEEEEEEec Confidence 9999999999998 No 10 >protein:vir:105470 Length: 451 # NCBI annotation: putative phage sheath tail protein # Family: family:all:632 # MgeID: mge:1502 # MgeName: KC5a # Cross-refs: genbank:acc:YP_529880;genbank:gi:90592620;genbank:GeneID:3974534 Probab=100.00 E-value=1.3e-102 Score=579.23 Aligned_cols=433 Identities=18% Similarity=0.202 Sum_probs=353.0 Q ss_pred CCCccccCcceecCceEEEEEcCCCccccCCCCceEEEEe-ccCCCCCceeEEEcChHHHHHHhcCcchHHHHHHHhhhh Q lcl|Aclame:pro 1 MAVEQFPRKKVSRPHTEITVDTSGIGGSSSSSDKTLMLVG-SAKGGKPDTVYRFRNYQQAKQVLRSGDLLDAIELAWNAS 79 (569) Q Consensus 1 ma~~~~~~~~~~~PGvyi~~~~~~~~~~~~~~~~~~~~~g-~a~~G~~~~~~~i~~~~~~~~~fg~g~l~~~~~~~~~~~ 79 (569) ||||+|.+|||+||||||||.+++.+++.++++++++++| .++||| ++|+.|.+++||++.||... +. ..+.+. T Consensus 1 magg~~~~~~K~~PGvYi~~~~~~~~~~~~~~~~~~~~i~~~~~~g~-~~~v~i~~~~d~~~~fG~~~--~~--~~~~~~ 75 (451) T protein:vir:10 1 MAGGTWKAQDKRRPGTYINVVGNGQREAASSLGRVLLIRDKGLGWGK-NGVIEVEANSDFTKKLGTTL--DD--PSLTAL 75 (451) T ss_pred CCceeeccceeecCceEEEEeccCcceeeccCCcEEEEEeeecCCCC-cccEEeecHHHHHHHcCCcc--cc--hhHHHH Confidence 9999999999999999999999999999999999999998 566776 78999999999999999632 11 122344 Q ss_pred hhhccCCceEEEEEcCCCccceeec--cceEEEEecCCcccceeEEEEecCCCCcceE-EEEEecCCceeeeccccccee Q lcl|Aclame:pro 80 DVNTASAGDILAVRVEDAKNATLTK--GGLTFASTIYGVDANEIQVALEDNNLTHTKR-LTVAFSKDGYKKVFDNLGKIF 156 (569) Q Consensus 80 ~~~~~g~~~~~~~rv~~~~~a~~~~--~~l~~~a~~~G~~gn~i~v~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 156 (569) +++++|+++||+||++++++|+++. +.++++|++||.|||+|+|.|+++.++.++. +.++.+...+. T Consensus 76 ~~~~~g~~~v~~yrl~~g~~a~~t~~~~~~~~~Aky~G~~Gn~i~v~v~~~~~d~~~~~v~t~~g~~~vd---------- 145 (451) T protein:vir:10 76 KETLKGASKVLVLNPNEGTAATLTKEGLPWTVTANYPGEKGNQITVSVEVSPADQNAATVSTIFGTKLVD---------- 145 (451) T ss_pred HHHhcCCcEEEEEEcCCCceEEEEeecCceEEEEeeCCcCCceEEEEEecccCCcCceEEEEEECCeEEE---------- Confidence 5556899999999999999887764 5799999999999999999998876543321 11111000000 Q ss_pred EEEecCcccceeEEEEecCccceeeeeeeccccccccceeeeeccccccccceehhhhhhcccccceeEEecccCCccee Q lcl|Aclame:pro 157 SIQYKGSEAQANFTIAQDSISKKATTLTLNVGSEPESTTEVMKYELGQGVYSETNVLVSAINSLPDWEAKFFPIGDKNLP 236 (569) Q Consensus 157 ~v~~~G~~a~a~~~v~~~~~s~~~~~lt~~~~~~~~~~~~v~~~~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 236 (569) ..++ . T Consensus 146 -------------------------------------~qtv----------------------------~---------- 150 (451) T protein:vir:10 146 -------------------------------------EQSI----------------------------K---------- 150 (451) T ss_pred -------------------------------------EEEe----------------------------e---------- Confidence 0000 0 Q ss_pred cccccchhhccccccceeehhhhhhhhhhhccCceEEEEeccCccccccceeeeecC----CCCCchhHHHHHHHHHHhc Q lcl|Aclame:pro 237 TDALEAVTKVDVKTEAVFVGALAGDIAKQLEYNDYVTVAVDATKPVEDFELTNLTGG----SDGTAPESWANKFPLLANE 312 (569) Q Consensus 237 ~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~a~~~~~~LtGG----~dg~~~~~~~~~l~~le~~ 312 (569) ...+..+..|+|++++....+..+..+.+.|+|| .++...++|.++|+++|.+ T Consensus 151 -----------------------~~~~~el~~nd~V~a~~~~~g~~~~~~~~~l~~~~~gg~~~~~~~~~~~~l~~~e~~ 207 (451) T protein:vir:10 151 -----------------------FNELDKFKGNDYITAKVVEEGSSKPVAFTNVSGTLTGGTTTESNKVESLLNDALENE 207 (451) T ss_pred -----------------------ccchhhccCCceEEEEecccccccceeeeecccccccccccCCccchHHHHHHhccc Confidence 0001223456777777655555555556666554 4445567899999999999 Q ss_pred CccEEEecC--CCHHHHHHHHHHHHHHhc-CCCeEEEEEcCCCCCCHHHHHHHhhhcCCceEEEEeccceeccCCcceee Q lcl|Aclame:pro 313 GGYYLVPLT--DKQAVHSEALAFVKDRTD-NGDPMRIIVGGGTNETVEESITRATNLRDPRASLVGFSGTRKMDDGRLLK 389 (569) Q Consensus 313 ~~~~i~~~~--~d~~v~~~l~~~v~~~~~-~g~~~~~vv~~~~~~~~~~~~~~a~~~n~~~v~~v~~~~~~~~~~g~~~~ 389 (569) ++++++++. +++++|+++.+|||+||+ +|+++++|++++++. .+|+|+++++.++++.. ++ .. T Consensus 208 ~~n~l~~~~~~~~~~i~~~~~a~ik~~r~~~g~~~~aVl~~~~~~----------~~d~egiinv~n~~~~~--dg--~~ 273 (451) T protein:vir:10 208 EYAVVTTAGFEPSSNMNKLVVEAVKRLRENEGRKVRGVIPTDADT----------TYNYEGISTVVNGYTLS--DG--TN 273 (451) T ss_pred eeeEEEEccCCCchHHHHHHHHHHHHHHHhcCCeEEEEecCccCC----------CCCCcceEEeecceEec--Cc--ee Confidence 999998765 457799999999999987 699999999976543 36899999999987643 34 46 Q ss_pred echHHHHHHHHHHhhcCchhcCccceeec-cccccccCCHHHHHHHHhcCcEEEEEecCCcceEEEEeeceecc---CCC Q lcl|Aclame:pro 390 LPGYMMASQIAGIASGLEVGEAITFKHFN-VTSVDRVFESSQLDMLNESGVISIEFVRNRTLTAFRVVQDVTTY---NDK 465 (569) Q Consensus 390 ~~~~~~aa~vAG~~A~~~~~~s~T~~~~~-~~~~~~~~t~~e~~~l~~~Gv~~l~~~~~~~~~~~ri~~~itT~---~~~ 465 (569) |+++++|+|+||++|++++++|+||++++ ..++.++|+++|+++++++|+++|++. ++..+||.++|||+ +.+ T Consensus 274 ~~~~~~~~~vAG~~Ag~~~~~S~T~~~~~~~~~v~~~~t~~e~~~~i~~G~lvl~~~---~g~~v~i~~~INTltt~~~~ 350 (451) T protein:vir:10 274 VDVKDATGYFAGISASADVATSLTYFEVEDAVSAYPKFDNEKTIKALDAGQIVFTTR---PGQRVVIEQDINSLHKFTAE 350 (451) T ss_pred echhhhHHHHHHHHcccccccCccceecCCceeeeeeCCHHHHHHHHhCCeEEEEEE---cCCeEEEEEccccceecCCC Confidence 89999999999999999999999999997 679999999999999999999999764 34468899999876 467 Q ss_pred CchhhhhhhHHHHHHHHHHHHHHHHHhcCCccc-CChHHHHHHHHHHHHHHHHHHhCCcccCCCccccEEec--CCCEEE Q lcl|Aclame:pro 466 SDPVKNEMSVGEANDFLVSELKIELDNNFIGTK-VIDTSASLIKNFIQSFLDNKKRAREIQDYTPEEVQVVL--EGDVAS 542 (569) Q Consensus 466 ~d~~~~~i~v~R~~d~i~~~i~~~~~~~~iGk~-nn~~~~~~v~~~i~~~L~~l~~~gaI~~~~~~d~~v~~--~~d~~~ 542 (569) ++++|+||+++|++|+|.+||++.|++.||||. |+++.|.+|+++|++||++|+++|+|++|+.+|+++.. .+|.++ T Consensus 351 k~~~~~ki~vir~~D~i~~di~~~~~~~yiGk~~N~~~gr~~~~~~i~~yl~~l~~~g~i~~~~~~d~~v~~~~~~~~v~ 430 (451) T protein:vir:10 351 KPQAFSKNRVIRTLDEIATNTENTFERTYLGNVGNNAAGRDLFKADRIAYLTSLQNRNMIQSFANTDITVEAGNDMDSIV 430 (451) T ss_pred CCcchhhhhHHHHHHHHHHHHHHHhhhccceecCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCccceEEeecCCCCEEE Confidence 899999999999999999999999999999996 66788999999999999999999999999988888874 578999 Q ss_pred EEEEEEEccceeEEEEEEEEE Q lcl|Aclame:pro 543 ISMTVMPIRSLNKITVQLVYK 563 (569) Q Consensus 543 v~~~v~pv~~~e~I~~ti~v~ 563 (569) +++.++|+++||||||++.|+ T Consensus 431 v~~~v~pvdame~iy~t~~v~ 451 (451) T protein:vir:10 431 VNLAVTPVDAMEKLYMTMVVR 451 (451) T ss_pred EEEEEEEEeeeeeEEEEEEEc Confidence 999999999999999999999 No 11 >protein:vir:78986 Length: 436 # NCBI annotation: putative sheath tail protein # Family: family:all:632 # MgeID: mge:1861 # MgeName: phiC2 # Cross-refs: genbank:acc:YP_001110731;genbank:gi:134287348;genbank:GeneID:4955160 Probab=100.00 E-value=2.8e-101 Score=571.87 Aligned_cols=420 Identities=14% Similarity=0.147 Sum_probs=354.0 Q ss_pred CCCccccCcceecCceEEEEEcCCCccccCCCCceEEEEeccCCCCCceeEEEcCh---HHHHHHhcCcchHHHHHHHhh Q lcl|Aclame:pro 1 MAVEQFPRKKVSRPHTEITVDTSGIGGSSSSSDKTLMLVGSAKGGKPDTVYRFRNY---QQAKQVLRSGDLLDAIELAWN 77 (569) Q Consensus 1 ma~~~~~~~~~~~PGvyi~~~~~~~~~~~~~~~~~~~~~g~a~~G~~~~~~~i~~~---~~~~~~fg~g~l~~~~~~~~~ 77 (569) ||||+|.+|||+|||+||||++.+...+.++.++++++|..++|||+++|+.|++. .++.+.||.. +.+. . .. T Consensus 3 magg~~~~~~K~~PG~Y~n~~~~~~~~~~~~~rGi~a~p~~~~wGp~~~v~~i~~~~~~~~~~~~~G~~-~~~~-~--~~ 78 (436) T protein:vir:78 3 LGGGTFVTQNKVLPGSYINFVSATRATSSLSDRGIVAMPLELDWGIDEEVFQVTSDDFEKYSTKYFGYD-YTHE-K--LK 78 (436) T ss_pred ccceeeccceeecCceEEEEEecCcceeeccCCeEEEEEEEecCCCCceeEEeecccchHHHHHHhcCc-cchH-H--HH Confidence 99999999999999999999999999999999999999999999999999999984 5788889952 2111 0 11 Q ss_pred hhhhhccCCceEEEEEcCCCccceeeccceEEEEecCCcccceeEEEEecCCCCcceE-EEEEecCCceeeeccccccee Q lcl|Aclame:pro 78 ASDVNTASAGDILAVRVEDAKNATLTKGGLTFASTIYGVDANEIQVALEDNNLTHTKR-LTVAFSKDGYKKVFDNLGKIF 156 (569) Q Consensus 78 ~~~~~~~g~~~~~~~rv~~~~~a~~~~~~l~~~a~~~G~~gn~i~v~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 156 (569) +.++.+.|++++|+||+++|.+|+++ .++|++||.+||+|+|.++++.++.++. +.++ T Consensus 79 ~l~~~~~~~~tv~~yrl~~G~~a~~~----v~~Aky~g~~gn~i~v~v~~~~~d~~~~dv~~~----------------- 137 (436) T protein:vir:78 79 GLRDLFKNIRLGYFYKLNKGVKASCS----IATARCSGIRGNDLKVIVTTNIDDNAKFDVVTL----------------- 137 (436) T ss_pred HHHHHhcCCCEEEEEECCCcceeeee----eeeeecCCCCCcEEEEEecccccccCceEEEEE----------------- Confidence 23344579999999999999998876 4799999999999999998875543321 1111 Q ss_pred EEEecCcccceeEEEEecCccceeeeeeeccccccccceeeeeccccccccceehhhhhhcccccceeEEecccCCccee Q lcl|Aclame:pro 157 SIQYKGSEAQANFTIAQDSISKKATTLTLNVGSEPESTTEVMKYELGQGVYSETNVLVSAINSLPDWEAKFFPIGDKNLP 236 (569) Q Consensus 157 ~v~~~G~~a~a~~~v~~~~~s~~~~~lt~~~~~~~~~~~~v~~~~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 236 (569) .|. .... T Consensus 138 ----~g~----------------------------------------~~~d----------------------------- 144 (436) T protein:vir:78 138 ----LDN----------------------------------------KKVD----------------------------- 144 (436) T ss_pred ----ecc----------------------------------------hhhh----------------------------- Confidence 000 0000 Q ss_pred cccccchhhccccccceeehhhhhhhhhhhccCceEEEEeccCccccccceeeeecCCCCCc--hhHHHHHHHHHHhcCc Q lcl|Aclame:pro 237 TDALEAVTKVDVKTEAVFVGALAGDIAKQLEYNDYVTVAVDATKPVEDFELTNLTGGSDGTA--PESWANKFPLLANEGG 314 (569) Q Consensus 237 ~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~a~~~~~~LtGG~dg~~--~~~~~~~l~~le~~~~ 314 (569) .+....++.+..|+||.++. ++.+++++.++|+||+||++ .++|.++|++||.++| T Consensus 145 --------------------~~~~~~~~~l~~n~~V~~~~--~g~la~~a~~~LtGG~dG~~~T~~dy~~al~~le~~~f 202 (436) T protein:vir:78 145 --------------------TQIAKVITELQDNDYVTWKK--EATLEATAGLTFTNGTNGEAVTGTEYQAFLDKIESYSF 202 (436) T ss_pred --------------------hhhHHHHhhccCCceEEEEe--cccccccceeeeeccccccccchHHHHHHHHHHcccce Confidence 00112234455678888764 56799999999999999974 3799999999999999 Q ss_pred cEEEecCCCHHHHHHHHHHHHHHhc-CCCeEEEEEcCCCCCCHHHHHHHhhhcCCceEEEEeccceeccCCcceeeechH Q lcl|Aclame:pro 315 YYLVPLTDKQAVHSEALAFVKDRTD-NGDPMRIIVGGGTNETVEESITRATNLRDPRASLVGFSGTRKMDDGRLLKLPGY 393 (569) Q Consensus 315 ~~i~~~~~d~~v~~~l~~~v~~~~~-~g~~~~~vv~~~~~~~~~~~~~~a~~~n~~~v~~v~~~~~~~~~~g~~~~~~~~ 393 (569) ++|++++.++++|+++.+|||+||+ +|+++++|+.... ..|+|+++++.+++ +++ .++++ T Consensus 203 n~l~~~~~d~~~~~~~~a~ikr~re~~g~~~~aV~~~~~------------~~d~EgIInv~n~v-----~g~--~~~~~ 263 (436) T protein:vir:78 203 NALGCLATTAEIKSLFVEFTKRMRDKVGAKFQTVLYKKN------------DADYEGVVSVENKI-----KDT--GLLES 263 (436) T ss_pred eEEEecCCChHHHHHHHHHHHHHHhhcCCeEEEEecCCC------------CCCCceEEEeeccc-----CCc--eechh Confidence 9999999999999999999999997 5899999996533 35789999999863 333 57899 Q ss_pred HHHHHHHHHhhcCchhcCccceeecc-ccccccCCHHHHHHHHhcCcEEEEEecCCcceEEEEeeceecc---CCCCchh Q lcl|Aclame:pro 394 MMASQIAGIASGLEVGEAITFKHFNV-TSVDRVFESSQLDMLNESGVISIEFVRNRTLTAFRVVQDVTTY---NDKSDPV 469 (569) Q Consensus 394 ~~aa~vAG~~A~~~~~~s~T~~~~~~-~~~~~~~t~~e~~~l~~~Gv~~l~~~~~~~~~~~ri~~~itT~---~~~~d~~ 469 (569) ++|+|+||++|++++++|+||++++. .++.++|+++|+++++++|+++|+++ +..+||.++|||+ +.+++++ T Consensus 264 ~~~a~vAG~~Ag~~~~~S~T~~~~~~~~~v~~~~t~~e~~~ai~~G~lvl~~d----~~~v~I~~~VNTltt~~~~k~~~ 339 (436) T protein:vir:78 264 SLIYWTTGAIAGCDINKSNTNKRYDGEFDVDVNYTQIHLEEALKTGKFIFHKV----GDEVHVLEDINTFVSFTDEKNDD 339 (436) T ss_pred HHHHHHHHHHhcCccccCccceecCccccccccCCHHHHHHHHhCCeEEEEEe----CCeEEEEEccccceecCCCCCcc Confidence 99999999999999999999999985 58999999999999999999999864 3468999999875 5678999 Q ss_pred hhhhhHHHHHHHHHHHHHHHHHhcCCccc-CChHHHHHHHHHHHHHHHHHHhCCcccCCCccccEEec--CCCEEEEEEE Q lcl|Aclame:pro 470 KNEMSVGEANDFLVSELKIELDNNFIGTK-VIDTSASLIKNFIQSFLDNKKRAREIQDYTPEEVQVVL--EGDVASISMT 546 (569) Q Consensus 470 ~~~i~v~R~~d~i~~~i~~~~~~~~iGk~-nn~~~~~~v~~~i~~~L~~l~~~gaI~~~~~~d~~v~~--~~d~~~v~~~ 546 (569) |+||+++|++|+|.+||+++|++.||||. |+.+.|.+|+++|++||++|+++|+|++|+.+|+++.. +++.+++++. T Consensus 340 ~~kI~vir~~D~i~~di~~~~~~~yiGKv~N~~dgr~~l~~~i~~yl~~L~~~g~I~~f~~~Dv~v~~~~~~~~v~v~~~ 419 (436) T protein:vir:78 340 FSSNQSVRVLDQIANDIATLFNTKYLGEVPNDKSGRISFWNDVVKHHEQLQNMRAIEDFKADDVSVEPGSDKKTVVVSDA 419 (436) T ss_pred hhhhhHHHHHHHHHHHHHHHhhhccccccCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEeecCCCCEEEEEEE Confidence 99999999999999999999999999996 66788999999999999999999999999999998874 5788999999 Q ss_pred EEEccceeEEEEEEEEE Q lcl|Aclame:pro 547 VMPIRSLNKITVQLVYK 563 (569) Q Consensus 547 v~pv~~~e~I~~ti~v~ 563 (569) ++|+++||+|||++.|. T Consensus 420 v~pvdamekiy~ti~v~ 436 (436) T protein:vir:78 420 VKVISAMSKLYMTVSVS 436 (436) T ss_pred EEEEEeeeeEEEEEEEC Confidence 99999999999999999 No 12 >protein:vir:98824 Length: 774 # NCBI annotation: putative phage tail sheath protein # Family: family:all:661 # MgeID: mge:1530 # MgeName: Ma-LMM01 # Cross-refs: genbank:acc:YP_851105;genbank:gi:117530262;genbank:GeneID:4484488 Probab=100.00 E-value=6.1e-74 Score=421.98 Aligned_cols=482 Identities=14% Similarity=0.088 Sum_probs=329.3 Q ss_pred CCC----ccccCcceecCceEEEEEcCCCccccC-CCCceEEEEeccCCCCCceeEEEcChHHHHHHhcCcchHHHHHHH Q lcl|Aclame:pro 1 MAV----EQFPRKKVSRPHTEITVDTSGIGGSSS-SSDKTLMLVGSAKGGKPDTVYRFRNYQQAKQVLRSGDLLDAIELA 75 (569) Q Consensus 1 ma~----~~~~~~~~~~PGvyi~~~~~~~~~~~~-~~~~~~~~~g~a~~G~~~~~~~i~~~~~~~~~fg~g~l~~~~~~~ 75 (569) .+| +. -+-++-.|||||||.++|.+++++ ++|++++|+|.+.|||+++|++|+||+|+.+.||+- T Consensus 270 ~~~~~~~~~-~~~~v~~~GVYVEEVpSGvrtIeGGV~TSVAAFVG~A~rGPvn~PvlITS~aD~~~~Fg~~--------- 339 (774) T protein:vir:98 270 CAGVEPFGE-ITRNVEDNGVVIQLEPALTGSISNRFSFYVTANDNTANRGFTTSPALVTTIPDPAIHFTSF--------- 339 (774) T ss_pred hcccccccc-eEEEEecCceEEEEeCCCCccccccccceeeeecccccCCCCCcCEEEeehhHhhhhhccc--------- Confidence 555 33 367888999999999999999988 899999999999999999999999999966666530 Q ss_pred hhhhhhhccCCceEEEEEcCCCccceeeccceEEEEecCCcccceeEEEEecCCCCcceEEEEEecCCceeeecccccce Q lcl|Aclame:pro 76 WNASDVNTASAGDILAVRVEDAKNATLTKGGLTFASTIYGVDANEIQVALEDNNLTHTKRLTVAFSKDGYKKVFDNLGKI 155 (569) Q Consensus 76 ~~~~~~~~~g~~~~~~~rv~~~~~a~~~~~~l~~~a~~~G~~gn~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (569) | ..++|++++|...... .-...++++|+.||.|||+|+|.+.+..... ..+.+...... . T Consensus 340 ~----GGl~GassA~r~~~~~-----sG~~~L~i~A~~pGawGN~ItV~I~~~t~~~-~~l~v~~~~~s----------~ 399 (774) T protein:vir:98 340 Q----GGLDGPRSAFRDFYTF-----NGTPLLRLQAVSEGNWGNQVTVSIYPVNNSE-FRLNVQDLNGS----------A 399 (774) T ss_pred c----CCccccceeeeeeeee-----cccceEEEEEeecCcCCCceEEEEEecCCce-eEEEEEecCCc----------c Confidence 0 0135677665322211 1124689999999999999999998764322 22322221110 0 Q ss_pred eEEEecCcccceeEEEEecCccceeeeeeeccccccccceeeeeccccccccceehhhhhhcccccceeEEecccCCcce Q lcl|Aclame:pro 156 FSIQYKGSEAQANFTIAQDSISKKATTLTLNVGSEPESTTEVMKYELGQGVYSETNVLVSAINSLPDWEAKFFPIGDKNL 235 (569) Q Consensus 156 ~~v~~~G~~a~a~~~v~~~~~s~~~~~lt~~~~~~~~~~~~v~~~~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 235 (569) +..... ...+.+...+..... .+. ...+....+ .. ..... ...++....+.... .+ T Consensus 400 f~~~~a----~e~~tv~~~~~~~~~-~v~----e~~dn~~i~-~~-~~~~~-------~~~in~vs~lv~~~------~~ 455 (774) T protein:vir:98 400 FNPPLA----DEVYTVKLGDTNESG-ELN----ALLDSKFIR-GF-FLPKS-------IDSINYDAALVRQS------PL 455 (774) T ss_pred cccccc----ceeEEEecccccccc-eee----eeeceeeEe-ec-ccccc-------cccccccccccccc------hh Confidence 100000 000111111000000 000 000000000 00 00000 00011111000000 00 Q ss_pred ecccccchhhccccccceeehhhhhhhhhhhccCceEEEEeccCccccccceeeeecCCCCCch--hHHHHHHHHHHhcC Q lcl|Aclame:pro 236 PTDALEAVTKVDVKTEAVFVGALAGDIAKQLEYNDYVTVAVDATKPVEDFELTNLTGGSDGTAP--ESWANKFPLLANEG 313 (569) Q Consensus 236 ~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~a~~~~~~LtGG~dg~~~--~~~~~~l~~le~~~ 313 (569) .....|. .... . ..+. ..............++||.||... .+|..+++.++..+ T Consensus 456 ~~a~~d~------~~~~--~--------~~~~--------~~~~~~~~~~v~v~lagG~Dg~~tt~~~igg~~~~~~~tg 511 (774) T protein:vir:98 456 RLAPPDE------SETD--V--------ENPA--------HVDFYGPNVLVDVTLENGYDGPPVTNDDYVSIIRTLENQP 511 (774) T ss_pred ccccccc------cccc--c--------cccc--------cccccCCcceEEEeecCCCCcccccchheecccccccccc Confidence 0000000 0000 0 0000 000000111223468899888643 46888888888888 Q ss_pred ccEEEecCCCHHHHHHHHHHHHHHhcCCCeEEEEEcCCCCCCHHHHHHHhhhcCCceEEEEeccceec-cCCcceeeech Q lcl|Aclame:pro 314 GYYLVPLTDKQAVHSEALAFVKDRTDNGDPMRIIVGGGTNETVEESITRATNLRDPRASLVGFSGTRK-MDDGRLLKLPG 392 (569) Q Consensus 314 ~~~i~~~~~d~~v~~~l~~~v~~~~~~g~~~~~vv~~~~~~~~~~~~~~a~~~n~~~v~~v~~~~~~~-~~~g~~~~~~~ 392 (569) .+.+.++..+..++.++.+||+.++..++.|+++++.+++.+.+++++++..|+++++++++||+... ..++....+|+ T Consensus 512 i~aLl~a~~~~~V~~aii~~~e~~~~~~~~r~avid~p~g~t~~~Ai~~r~~f~S~~aal~~Pwvkv~D~~~g~~~~vPp 591 (774) T protein:vir:98 512 VHILLVGTTNVGVQQALITEAERASDSDGLRIAVLAAPPRTTPTLAASVTRGFNSTRAVMVAGWFTYAGQPNSSRYGVPG 591 (774) T ss_pred eeEEEcCccchhhHHHHHHHHHHhhhcccceEEEEECCCCCCHHHHHHHHhccCCceEEEEeCcEEEeccCCCceeecCh Confidence 88888888899999999999999998888999999999999999999999999999999999998643 34455556665 Q ss_pred HHHHHHHHHHhhcCchhcCccceeec-ccc------ccccCCHHHHHHHHhcCcEEEEEecCCcceEEEEeeceeccCCC Q lcl|Aclame:pro 393 YMMASQIAGIASGLEVGEAITFKHFN-VTS------VDRVFESSQLDMLNESGVISIEFVRNRTLTAFRVVQDVTTYNDK 465 (569) Q Consensus 393 ~~~aa~vAG~~A~~~~~~s~T~~~~~-~~~------~~~~~t~~e~~~l~~~Gv~~l~~~~~~~~~~~ri~~~itT~~~~ 465 (569) + +++||++|++|+++||+|+++. +++ +...+++.|++.++++|++|+... ..+.++|+|.+.|+ + T Consensus 592 S---g~vAGl~ArtDv~kSPANk~I~Givg~ai~~~l~~~~t~ae~d~Ln~~gIN~i~it--t~g~G~rvWG~RTl---s 663 (774) T protein:vir:98 592 A---AVYAGKLAAIDFFVSPAARSLVGPLFNIIESDTDNYTSRSNQDIYSAARLEVLSLD--TVDRTYRFASGVTL---S 663 (774) T ss_pred h---HHHHHHHHhcCcccccCCceeecceeccccccccccccchhhhhhcccccceeEEE--EcCCcEEEEccccc---C Confidence 4 9999999999999999999986 332 344567899999999999998632 24568999999886 4 Q ss_pred CchhhhhhhHHHHHHHHHHHHHHHHHhcCCcccCChHHHHHHHHHHHHHHHHHHhCCcccCCCcc------ccEEecCCC Q lcl|Aclame:pro 466 SDPVKNEMSVGEANDFLVSELKIELDNNFIGTKVIDTSASLIKNFIQSFLDNKKRAREIQDYTPE------EVQVVLEGD 539 (569) Q Consensus 466 ~d~~~~~i~v~R~~d~i~~~i~~~~~~~~iGk~nn~~~~~~v~~~i~~~L~~l~~~gaI~~~~~~------d~~v~~~~d 539 (569) .|+.|++|++||++|+|+++|++.+ .+++||||++.+|..|+..++.||..||++|+|.|+.+. +.+.+++.+ T Consensus 664 sDp~wr~InVRRlfd~Ie~SI~~~~-~~~VfEPNd~~l~~~I~~sI~~fL~~L~~~GaL~G~~~V~~D~etNt~~dI~~G 742 (774) T protein:vir:98 664 TDPAWERIYLRRVHDVVRQGAHAIL-RNYVAMPNSRLVRNQIAAALNAFMGELKRNGNIVSFRPAIIDGSNNSTAAYFSR 742 (774) T ss_pred CCcccceEeehhhHHHHHHHHHHHH-HHhccCCCCHHHHHHHHHHHHHHHHHHHhCCceecceEEEEcCCCCCHHHhhCC Confidence 5789999999999999999999986 579999999999999999999999999999999998642 223456789 Q ss_pred EEEEEEEEEEccceeEEEEEEEEEeeeeeC Q lcl|Aclame:pro 540 VASISMTVMPIRSLNKITVQLVYKQQILTA 569 (569) Q Consensus 540 ~~~v~~~v~pv~~~e~I~~ti~v~~~~~~~ 569 (569) +++|++.++|++|||||++++.++.++.+. T Consensus 743 ~l~i~I~vaP~~PAEfIilri~q~t~~~~l 772 (774) T protein:vir:98 743 ELYVSLQFQPLYSADYIYVTISRDTETSPL 772 (774) T ss_pred EEEEEEEEEecCCcceEEEEEEEeecceec Confidence 999999999999999999999988888877 No 13 >protein:vir:108052 Length: 660 # NCBI annotation: gp18 tail sheath protein # Family: family:all:661 # MgeID: mge:2002 # MgeName: JS98 # Cross-refs: genbank:acc:YP_001595294;genbank:gi:161622600;genbank:GeneID:5783771 Probab=100.00 E-value=3.7e-72 Score=412.23 Aligned_cols=545 Identities=14% Similarity=0.115 Sum_probs=324.2 Q ss_pred cceecCceEEEEEcCCCccccCCCCceEEEEeccCCCCCceeEEEcChHHHHHHhcCcchHHHHHHHhhhhhhhccCCce Q lcl|Aclame:pro 9 KKVSRPHTEITVDTSGIGGSSSSSDKTLMLVGSAKGGKPDTVYRFRNYQQAKQVLRSGDLLDAIELAWNASDVNTASAGD 88 (569) Q Consensus 9 ~~~~~PGvyi~~~~~~~~~~~~~~~~~~~~~g~a~~G~~~~~~~i~~~~~~~~~fg~g~l~~~~~~~~~~~~~~~~g~~~ 88 (569) =+|++|||||||.+ +.++++++++++++|+|.++|||+++|++|+||+||++.||+.+ +.-.+.|....+|+|||++ T Consensus 1 ~~~~~Pgvyv~e~~-~~~~i~~~~t~~~~~vg~~~~gp~~~p~~v~s~~~~~~~fg~~~--~~~~~~~~~~~~f~~~g~~ 77 (660) T protein:vir:10 1 MALLSPGIELKETS-VQSTVVRNATGRAALVGKFQWGPAFQVTQITNEVELVDLFGGPN--NEVADYFMSGMNFLQYGND 77 (660) T ss_pred CceecCceEEEeec-CCccccCCCcccceEEeecCCCCCccCeEcCCHHHHHHHcCCcC--CCchhHHHHHHHHHhCCce Confidence 89999999999996 78999999999999999999999999999999999999999732 2223344455566899999 Q ss_pred EEEEEcCCCc---cceeeccceEEEEecCC---cccceeEEEEecCCCCcceEEEEEecCCcee---------------- Q lcl|Aclame:pro 89 ILAVRVEDAK---NATLTKGGLTFASTIYG---VDANEIQVALEDNNLTHTKRLTVAFSKDGYK---------------- 146 (569) Q Consensus 89 ~~~~rv~~~~---~a~~~~~~l~~~a~~~G---~~gn~i~v~~~~~~~~~~~~~~~~~~~~~~~---------------- 146 (569) ||++|+.++. .++.-...+.+++..+| .||+.+++....................... T Consensus 78 ~~vvrv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~v~~~~a~g~~~~~~~~ta~~~~~a~~v 157 (660) T protein:vir:10 78 LRTVRVVSREFAKNASPIAGNIETTITTAGSNYAVGDKINIKYNQTVVESEGRVTSVDTDGKILSVFIPSAKIIAYARSL 157 (660) T ss_pred EEEEEecccccccccccccccceeEEeeccccccccceeeEeeccccccccccceeeccccceeeecccccccccccccc Confidence 9999995443 23333456888888887 6999999977543322111111111100000 Q ss_pred eecccccceeEEEecCcccce--eEEEE---ecCccceeeeeeecccccc-ccceee---------eeccccccccceeh Q lcl|Aclame:pro 147 KVFDNLGKIFSIQYKGSEAQA--NFTIA---QDSISKKATTLTLNVGSEP-ESTTEV---------MKYELGQGVYSETN 211 (569) Q Consensus 147 ~~~~~~~~~~~v~~~G~~a~a--~~~v~---~~~~s~~~~~lt~~~~~~~-~~~~~v---------~~~~l~~~~~~~~~ 211 (569) .............+.+..... ...+. .++................ ...... ..+.-..+...... T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~a~sv~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~g~~G~~i~v~ 237 (660) T protein:vir:10 158 NQYPTLGPAWTAEVTSASSGVSGTITVGKIVTDSGILLTEAENSEEAITSLEFQAALKKFAMPGVVALYPGEIGSTLEVE 237 (660) T ss_pred ccccccccceeEEEecccCccccceeeeeeeccCcceEEeeeccccccccccceeeccccccceeeeecccccCcceeEE Confidence 000000111112222111110 00110 0110000000000000000 000000 00000000000000 Q ss_pred hh-hhhcccccceeEE-eccc----------CCccee-cccccchhhc-cccccceeehhhhh---------hhhhhh-- Q lcl|Aclame:pro 212 VL-VSAINSLPDWEAK-FFPI----------GDKNLP-TDALEAVTKV-DVKTEAVFVGALAG---------DIAKQL-- 266 (569) Q Consensus 212 ~~-~~~i~~~~~~~~~-~~~~----------~~~~~~-~~~~d~~~~~-~~~~~~~~~~~~~~---------~~~~~~-- 266 (569) .. ......-+..... .... ...... .+....+... ........+..... .....+ T Consensus 238 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (660) T protein:vir:10 238 IVSKAAYEAGSSKMLDVYPGGGTRASIAKAVFNYGPQTDDQYAIIVRRDGAIVESVVLSTKEGEKDVYGNNIYLDDYFAK 317 (660) T ss_pred EeeccccCCcceeEEeeeeccceeeEEeeeecccccccccccccccccCCcccceeeeeccccccccccceeeeehhhcC Confidence 00 0000000000000 0000 000000 0000000000 00000000000000 000011 Q ss_pred ccCceEEEEeccCccccccceeeeecCCCCCc---hhHHHHHHHHHHhc---CccEEEecC-------CCHHHHHHHHHH Q lcl|Aclame:pro 267 EYNDYVTVAVDATKPVEDFELTNLTGGSDGTA---PESWANKFPLLANE---GGYYLVPLT-------DKQAVHSEALAF 333 (569) Q Consensus 267 ~~~~~v~~~~~~~~~~a~~~~~~LtGG~dg~~---~~~~~~~l~~le~~---~~~~i~~~~-------~d~~v~~~l~~~ 333 (569) ..+.++..... ..+........|+||.|+.. ..++..++++|+.. +.++++++. ...++++++.+| T Consensus 318 ~~~~~v~~~~~-~~~~~~~~~~~l~gg~~~~~~~t~~~~~~~~~~~~~~~~~~~~~l~~p~~~~~~~~~~~~v~~al~~~ 396 (660) T protein:vir:10 318 GTSNYIYATSL-NWPKGFSGIINLSGGISANDKVTAGDLMQGWDLFADREALHINLLIAGAVAGEGDEVASTVQKHVVSI 396 (660) T ss_pred CCccEEEEEec-cCCCCcccceeeeccccCccccccchhhhhhhhhhhhhhcccceEEEcCcCCCchhhhHHHHHHHHHH Confidence 12233333221 12222223457999988753 34677777777654 345554432 235688999999 Q ss_pred HHHHhcCCCeEEEEEcCCCC--------CCHHHHHHHhh----------hcCCceEEEEeccceec-cCCcceeeechHH Q lcl|Aclame:pro 334 VKDRTDNGDPMRIIVGGGTN--------ETVEESITRAT----------NLRDPRASLVGFSGTRK-MDDGRLLKLPGYM 394 (569) Q Consensus 334 v~~~~~~g~~~~~vv~~~~~--------~~~~~~~~~a~----------~~n~~~v~~v~~~~~~~-~~~g~~~~~~~~~ 394 (569) |+++++ |+++++.+.. .+++++++... .|++.++++++|++... ..++..+.+|++ T Consensus 397 ~~~~~~----~~aiid~p~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~s~~~~~~~p~~~~~d~~~~~~~~~p~s- 471 (660) T protein:vir:10 397 ADERQD----CLAFISPPKGLLVNVPLTRAVDNLIDWRTGAGTFDANNMNISTTYAAIDGNYKYQYDKYNDVNRWVPLA- 471 (660) T ss_pred HHhhCC----EEEEEecCcccccccccccCHHHHHHHHhhcccccccccccCcceEEEEcCceEEecccCCceeEechh- Confidence 998854 9999987643 36777777654 47899999999997543 334455666664 Q ss_pred HHHHHHHHhhcCc----hhcCccceeec----cccccccCCHHHHHHHHhcCcEEEEEecCCcceEEEEeeceeccCCCC Q lcl|Aclame:pro 395 MASQIAGIASGLE----VGEAITFKHFN----VTSVDRVFESSQLDMLNESGVISIEFVRNRTLTAFRVVQDVTTYNDKS 466 (569) Q Consensus 395 ~aa~vAG~~A~~~----~~~s~T~~~~~----~~~~~~~~t~~e~~~l~~~Gv~~l~~~~~~~~~~~ri~~~itT~~~~~ 466 (569) +++||++|..+ +++||+|+.+. ..++...+++.|++.|+++|++|++...+ +.++|+|.+.|.. .. T Consensus 472 --g~~AGl~Ar~D~~~g~~~sPan~~~~~i~g~~~~~~~~~~~e~~~Ln~~gIn~i~~~~~--~~G~~~wG~rT~~--~~ 545 (660) T protein:vir:10 472 --ADLAGLCARTDDVSQPWMSPAGYNRGQILNVLKLAIEPRQAQRDRMYQEAINPVVGFAG--GDGFVLFGDKTAT--KV 545 (660) T ss_pred --HHHHHHHHHhhccCCcEEccCCeeeceeeccceeeecCChhhHHhHhhCCceEEEEeeC--CCcEEEEcccccC--CC Confidence 88889998877 77899999753 35677789999999999999999975422 3578999988753 23 Q ss_pred chhhhhhhHHHHHHHHHHHHHHHHHhcCCcccCChHHHHHHHHHHHHHHHHHHhCCcccCCCc-----cccEEecCCCEE Q lcl|Aclame:pro 467 DPVKNEMSVGEANDFLVSELKIELDNNFIGTKVIDTSASLIKNFIQSFLDNKKRAREIQDYTP-----EEVQVVLEGDVA 541 (569) Q Consensus 467 d~~~~~i~v~R~~d~i~~~i~~~~~~~~iGk~nn~~~~~~v~~~i~~~L~~l~~~gaI~~~~~-----~d~~v~~~~d~~ 541 (569) +.+|++|++||++|+|+++|++.. .+|++|||++.+|..|+..|+.||.+||++|+|.+|.. .+.+.+++++++ T Consensus 546 ~s~~~~i~vrR~~~~i~~si~~~~-~~~v~epn~~~l~~~i~~~i~~fL~~l~~~gal~g~~V~~d~~~nt~~di~~G~~ 624 (660) T protein:vir:10 546 PSPMDHINVRRLFNMLKKNIGDAS-KYKLFELNDNFTRSSFRMEVSQYLDGIKALGGIYEGRVVCDTTVNTPAVIDRNEF 624 (660) T ss_pred CcccceEehhhHHHHHHHHHHHHH-HHhccCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeEEEEcCCCCCHHHhhCCeE Confidence 457999999999999999999886 68999999999999999999999999999999999743 233556788999 Q ss_pred EEEEEEEEccceeEEEEEEEEEeeeeeC Q lcl|Aclame:pro 542 SISMTVMPIRSLNKITVQLVYKQQILTA 569 (569) Q Consensus 542 ~v~~~v~pv~~~e~I~~ti~v~~~~~~~ 569 (569) +|++.++|++|||||++||...-.-++- T Consensus 625 ~~~i~~~P~~pae~I~~~~~~~~~~~~~ 652 (660) T protein:vir:10 625 IANIYVKPARSINYITLNFVATSTGADF 652 (660) T ss_pred EEEEEEEecCCccEEEEEEEEeecCccH Confidence 9999999999999999999955544443 No 14 >protein:vir:101187 Length: 663 # NCBI annotation: tail sheath protein # Family: family:all:661 # MgeID: mge:1582 # MgeName: 44RR2.8t # Cross-refs: genbank:acc:NP_932509;genbank:gi:37651635;genbank:GeneID:2610680 Probab=100.00 E-value=1.2e-71 Score=409.40 Aligned_cols=526 Identities=13% Similarity=0.076 Sum_probs=316.0 Q ss_pred cceecCceEEEEEcCCCccccCCCCceEEEEeccCCCCCceeEEEcChHHHHHHhcCcchHHHHHHHhhhhhhhccCCce Q lcl|Aclame:pro 9 KKVSRPHTEITVDTSGIGGSSSSSDKTLMLVGSAKGGKPDTVYRFRNYQQAKQVLRSGDLLDAIELAWNASDVNTASAGD 88 (569) Q Consensus 9 ~~~~~PGvyi~~~~~~~~~~~~~~~~~~~~~g~a~~G~~~~~~~i~~~~~~~~~fg~g~l~~~~~~~~~~~~~~~~g~~~ 88 (569) =+|++|||||||.+ +.+++++++|++++|+|.++|||+++|++|+||+||++.||+ +.+...+.|....+|+|||++ T Consensus 1 ~~~~~PgVyv~e~~-~~~~i~~v~ts~~~fvG~~~~Gp~~~p~~i~s~~d~~~~fG~--~~~~~~~~~~v~~~f~ngg~~ 77 (663) T protein:vir:10 1 MALLSPGIEMKETS-INSTVVRSATGRAAIVGKFAWGPAYEVRQVTNEVELVDMFGS--PDNVTAPYFMSAMNFLQYGND 77 (663) T ss_pred CceecCceEEEEec-CcccccccCccceeEEeeeccCCCCccEEecCHHHHHHHhCC--cCccchhHHHHHHHHHhCCCe Confidence 78999999999995 889999999999999999999999999999999999999996 223335556666777999999 Q ss_pred EEEEEcCCCccc---eeeccceEEEE---ecCCcccceeEEEEecCCCCcce----------EEEEEecCCcee------ Q lcl|Aclame:pro 89 ILAVRVEDAKNA---TLTKGGLTFAS---TIYGVDANEIQVALEDNNLTHTK----------RLTVAFSKDGYK------ 146 (569) Q Consensus 89 ~~~~rv~~~~~a---~~~~~~l~~~a---~~~G~~gn~i~v~~~~~~~~~~~----------~~~~~~~~~~~~------ 146 (569) ||++|+.++.++ .+-.+...++. ..++.||+.+++........... .+.++...-... T Consensus 78 ~~vvRv~~~~~~~~a~~~~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~~~~n~~~~~v~~~~a~~~~~~~~v 157 (663) T protein:vir:10 78 LRLVRVIDMEKAKNASPLVNQVSVTITTEGQGYTVGDAITVKYNNATITEAGKVTAVDSDGKIKSLFVPTAEIIAKTRQL 157 (663) T ss_pred EEEEEccCCcccccccccCCcceeeeeccccCccccccccccccccccccccceeeeccCCceEEEEecccccccccccc Confidence 999999654332 22223333333 34557889888866433222111 111111100000 Q ss_pred eecccccceeEEEecCcccc--ee---EEEEecCccceeeeeeeccccccccceeeeeccccccccceehhhhhhccccc Q lcl|Aclame:pro 147 KVFDNLGKIFSIQYKGSEAQ--AN---FTIAQDSISKKATTLTLNVGSEPESTTEVMKYELGQGVYSETNVLVSAINSLP 221 (569) Q Consensus 147 ~~~~~~~~~~~v~~~G~~a~--a~---~~v~~~~~s~~~~~lt~~~~~~~~~~~~v~~~~l~~~~~~~~~~~~~~i~~~~ 221 (569) .............+...... .. ..+..+... +......... ..+...+..... ....+ T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vv~~~~~-----~~~~~~~a~~-~~~~~~~~~~~~-----------~~~~~ 220 (663) T protein:vir:10 158 GTYPTLGDNWRIDVSGASGGSAAALALGNIVVDSGV-----TFGNSEDAPA-VMTSPAVMEKYA-----------KFGMP 220 (663) T ss_pred ceeeeccccceeEeeeccccccccccccceecccce-----eeEeeccccc-cccccchhhhcc-----------cccce Confidence 00000000001111100000 00 000000000 0000000000 000000000000 00000 Q ss_pred ceeEEecccCCccee---------------------------------------------cccccchhhcc-c----ccc Q lcl|Aclame:pro 222 DWEAKFFPIGDKNLP---------------------------------------------TDALEAVTKVD-V----KTE 251 (569) Q Consensus 222 ~~~~~~~~~~~~~~~---------------------------------------------~~~~d~~~~~~-~----~~~ 251 (569) .+.+.+.+..++.+. ....+...... . ..+ T Consensus 221 ~~~a~~~G~~Gn~i~v~i~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~ 300 (663) T protein:vir:10 221 LVSAVYPGEIGSTVEVEIVSKTAFNSGAQQTIYPFGGTRTSNARGVIQYGPMTDDQFAIIVRRDGIVVESTVLSTRKGDR 300 (663) T ss_pred eeeeecccccccceeEEecccccccccccccccccccccccccceeeeeccccccceeEEEecCCcceeeeeeeeccccc Confidence 011111110000000 00000000000 0 000 Q ss_pred ceeehhhhhhhhhhh--ccCceEEEEeccCccccccceeeeecCCCCCch---hHHHHHHHHHHhcC---ccEEEecC-- Q lcl|Aclame:pro 252 AVFVGALAGDIAKQL--EYNDYVTVAVDATKPVEDFELTNLTGGSDGTAP---ESWANKFPLLANEG---GYYLVPLT-- 321 (569) Q Consensus 252 ~~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~a~~~~~~LtGG~dg~~~---~~~~~~l~~le~~~---~~~i~~~~-- 321 (569) ....... .....+ ....++.... ...+........|+||.|+..+ .++..++++|++.+ .+.++++. T Consensus 301 ~~~~~~~--~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~gg~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~~~ 377 (663) T protein:vir:10 301 DVYGSNI--FMDDYFRNGGSNFIFASS-EGWPAGFTGIIQLGGGTSANADVGADELIKGWDLFSDREALHVNLMIAGACG 377 (663) T ss_pred ccchhhh--hhhhhhccCcceEEEEee-cccCccccceeEcccccCCCccccchhhHHHHHhhhcccccceeEEEeccCC Confidence 0000000 011111 1233443322 1222222224579999998643 46888888877654 23333321 Q ss_pred -----CCHHHHHHHHHHHHHHhcCCCeEEEEEcCCCC--------CCHHHHHHHh-------------hhcCCceEEEEe Q lcl|Aclame:pro 322 -----DKQAVHSEALAFVKDRTDNGDPMRIIVGGGTN--------ETVEESITRA-------------TNLRDPRASLVG 375 (569) Q Consensus 322 -----~d~~v~~~l~~~v~~~~~~g~~~~~vv~~~~~--------~~~~~~~~~a-------------~~~n~~~v~~v~ 375 (569) ...+++.++.+||+++++ ++++++.+.. .++++++++. ..|+|++.++++ T Consensus 378 ~~~~~~~~~v~~al~~~a~~~~~----~~ai~d~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~ 453 (663) T protein:vir:10 378 SDGAEIASTVQKYVVSLADDRQD----CVAIVNPPAELMVGIPTSTAVKNIVEWRNGMTGSGEVVDNNMNISSTYAFIIG 453 (663) T ss_pred CCchhhHHHHHHHHHHHHHhhCC----EEEEEecCcccccccccccchHHHHHHHHhccccccchhhccccCcceEEEEc Confidence 125688889999988754 9999988753 2455555543 357899999999 Q ss_pred ccceec-cCCcceeeechHHHHHHHHHHhhcCc----hhcCccceeec----cccccccCCHHHHHHHHhcCcEEEEEec Q lcl|Aclame:pro 376 FSGTRK-MDDGRLLKLPGYMMASQIAGIASGLE----VGEAITFKHFN----VTSVDRVFESSQLDMLNESGVISIEFVR 446 (569) Q Consensus 376 ~~~~~~-~~~g~~~~~~~~~~aa~vAG~~A~~~----~~~s~T~~~~~----~~~~~~~~t~~e~~~l~~~Gv~~l~~~~ 446 (569) ||+... ..++..+.+|++ +++||++|+.+ +++||.|+.+. ..++...+++.|++.|+++|++|++... T Consensus 454 P~~~~~d~~~~~~~~~p~s---~~vAGl~Ar~D~~~g~~~sPan~~~~~i~g~~~~~~~~~~~~~~~Ln~~gin~i~~~~ 530 (663) T protein:vir:10 454 NYKYQYDKYNDINRWVPLA---ADIAGLCAYTDQVSHPWMSPAGYRRGQIRNCIKLAIEPKQSMRDTMYQVAINPVTGFA 530 (663) T ss_pred cceEEecccCCceEEechh---HHHHHHHHHhhccCCceEccCCceeccccccccceeccChhHHHHHhhCCceEEEEEe Confidence 997643 334555666664 88888888776 67899998653 4578889999999999999999997643 Q ss_pred CCcceEEEEeeceeccCCCCchhhhhhhHHHHHHHHHHHHHHHHHhcCCcccCChHHHHHHHHHHHHHHHHHHhCCcccC Q lcl|Aclame:pro 447 NRTLTAFRVVQDVTTYNDKSDPVKNEMSVGEANDFLVSELKIELDNNFIGTKVIDTSASLIKNFIQSFLDNKKRAREIQD 526 (569) Q Consensus 447 ~~~~~~~ri~~~itT~~~~~d~~~~~i~v~R~~d~i~~~i~~~~~~~~iGk~nn~~~~~~v~~~i~~~L~~l~~~gaI~~ 526 (569) + ..++|+|.+.|..+ .+..|++|++||++|+|+++|++.. .+|++|||++.+|..|+..|+.||.+||++|+|.+ T Consensus 531 ~--~~G~~~wG~rT~s~--~~s~~~~i~vrR~~~~i~~si~~~~-~~~v~e~n~~~l~~~i~~~i~~~L~~l~~~gal~g 605 (663) T protein:vir:10 531 G--GDGFVLFGDKMATQ--VPSPFDRINVRRLFNMLKKNIGDTS-KYELFENNDAFTRQSFRMETSQYLDGIRSLGGCYD 605 (663) T ss_pred C--CCcEEEEcccccCC--CCcccceEehhhHHHHHHHHHHHHH-HHhccCCCCHHHHHHHHHHHHHHHHHHHhcCceee Confidence 2 25789999988632 3347999999999999999999886 58999999999999999999999999999999999 Q ss_pred CCc-----cccEEecCCCEEEEEEEEEEccceeEEEEEEEEEeeeeeC Q lcl|Aclame:pro 527 YTP-----EEVQVVLEGDVASISMTVMPIRSLNKITVQLVYKQQILTA 569 (569) Q Consensus 527 ~~~-----~d~~v~~~~d~~~v~~~v~pv~~~e~I~~ti~v~~~~~~~ 569 (569) |.. .+.+.++++++++|++.++|++|+|||++||.....-++- T Consensus 606 ~~v~~d~~~nt~~~i~~G~~~~~i~~~p~~pae~i~~~~~~~~~~~~~ 653 (663) T protein:vir:10 606 FRVVCDTTNNTPNVIDRNEFVGTIYVKPPRSINYITLNMVATSTGANF 653 (663) T ss_pred eEEEEcCCCCCHHHhhCCeEEEEEEEEecCCcceEEEEEEEeecCccH Confidence 743 2345567899999999999999999999999854333322 No 15 >protein:vir:101804 Length: 663 # NCBI annotation: gp18 # Family: family:all:661 # MgeID: mge:1580 # MgeName: 31 # Cross-refs: genbank:acc:YP_238881;genbank:gi:66391956;genbank:GeneID:3416631 Probab=100.00 E-value=1e-71 Score=409.82 Aligned_cols=531 Identities=14% Similarity=0.089 Sum_probs=317.8 Q ss_pred cceecCceEEEEEcCCCccccCCCCceEEEEeccCCCCCceeEEEcChHHHHHHhcCcchHHHHHHHhhhhhhhccCCce Q lcl|Aclame:pro 9 KKVSRPHTEITVDTSGIGGSSSSSDKTLMLVGSAKGGKPDTVYRFRNYQQAKQVLRSGDLLDAIELAWNASDVNTASAGD 88 (569) Q Consensus 9 ~~~~~PGvyi~~~~~~~~~~~~~~~~~~~~~g~a~~G~~~~~~~i~~~~~~~~~fg~g~l~~~~~~~~~~~~~~~~g~~~ 88 (569) =+|++|||||||.+ +.+++++++|++++|+|.+.|||+++|++|+||.||++.||+- .+.-.+.|....+|+|||++ T Consensus 1 ~~~~~Pgvyv~e~~-~~~~i~~~~t~~~~~vG~~~~Gp~~~p~~v~~~~~~~~~fg~~--~~~~~~~~~~~~~f~ngg~~ 77 (663) T protein:vir:10 1 MALLSPGIEMKETS-INSTVVRSATGRAAIVGKFAWGPAYEVRQVTNEVELVDMFGSP--DNVTAPYFMSAMNFLQYGND 77 (663) T ss_pred CceecCceEEEEec-CCccccccCcccceeEeecccCCCCccEEecCHHHHHHhcCCc--CCcchhHHHHHHHHHhCCCe Confidence 78999999999995 8999999999999999999999999999999999999999962 23334556666777999999 Q ss_pred EEEEEcCCCccc---eeeccceEEEEecCC---cccceeEEEEecCCCCcceEEEEEecCCceeeeccc----------- Q lcl|Aclame:pro 89 ILAVRVEDAKNA---TLTKGGLTFASTIYG---VDANEIQVALEDNNLTHTKRLTVAFSKDGYKKVFDN----------- 151 (569) Q Consensus 89 ~~~~rv~~~~~a---~~~~~~l~~~a~~~G---~~gn~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------- 151 (569) ||++|+.++.++ .+..+.+.++...+| .|||.+++.+.................+........ T Consensus 78 ~~vvRv~~~~~~~~a~~~~~~~~~~~~~~~~~~~~g~~i~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~ta~~~~~~~~v 157 (663) T protein:vir:10 78 LRLVRVIDMEKAKNASPLVNQVSVTITTEGQGYTVGDAITVKYNNATITEAGKVTAVDSDGKIKSLFVPTAEIIAKTRQL 157 (663) T ss_pred EEEEEccCCccccccccccccceeEEeecccccccccccccccccccccccccceeeecccceEEEeecccccccccccc Confidence 999999544333 333445555554444 699999987765433322222222111111110000 Q ss_pred -----ccceeEEEecCcccceeEEEEecCcc-ceeeeeee-ccccccccceeeeeccccccccceehhhhhhccccccee Q lcl|Aclame:pro 152 -----LGKIFSIQYKGSEAQANFTIAQDSIS-KKATTLTL-NVGSEPESTTEVMKYELGQGVYSETNVLVSAINSLPDWE 224 (569) Q Consensus 152 -----~~~~~~v~~~G~~a~a~~~v~~~~~s-~~~~~lt~-~~~~~~~~~~~v~~~~l~~~~~~~~~~~~~~i~~~~~~~ 224 (569) ......+.+................. ........ ...... .+...+... ..-...+.+. T Consensus 158 ~~~~~~~~~~~~~~s~~s~~~~~a~~v~~v~~d~~~~v~~~~~a~~~---~t~~~~~~~-----------~~~~~~~~i~ 223 (663) T protein:vir:10 158 GTYPTLGDNWRIDVSGASGGSAAALALGNIVVDSGVTFGNSEDAPAV---MTSPAVMEK-----------YAKFGMPLIS 223 (663) T ss_pred ccceeeccceeeEeeeccCccccccccceeccccceEEeeccccccc---ccccccccc-----------ccccccceEE Confidence 00000111111000000000000000 00000000 000000 000000000 0000000011 Q ss_pred EEecccCCccee---------------------------------------------cccccchhh-cccc----cccee Q lcl|Aclame:pro 225 AKFFPIGDKNLP---------------------------------------------TDALEAVTK-VDVK----TEAVF 254 (569) Q Consensus 225 ~~~~~~~~~~~~---------------------------------------------~~~~d~~~~-~~~~----~~~~~ 254 (569) +...+..++.+. ....+.... .... ..... T Consensus 224 A~~~G~~Gn~i~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~ 303 (663) T protein:vir:10 224 AVYPGEIGSTVEVEIVSKTAFNSGAQQTIYPFGGTRTSNARGVIQYGPMTDDQFAIIVRRDGIVVESTVLSTRKGDRDVY 303 (663) T ss_pred eccCCcccceeeeeeccccccccccccceecccccccccccceeecccccccceeeEeecCCcceeeecccccccccccc Confidence 111000000000 000000000 0000 00000 Q ss_pred ehhhhhhhhhhhccCceEEEEeccCccccccceeeeecCCCCCch---hHHHHHHHHHHhcC---ccEEEecC------- Q lcl|Aclame:pro 255 VGALAGDIAKQLEYNDYVTVAVDATKPVEDFELTNLTGGSDGTAP---ESWANKFPLLANEG---GYYLVPLT------- 321 (569) Q Consensus 255 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~a~~~~~~LtGG~dg~~~---~~~~~~l~~le~~~---~~~i~~~~------- 321 (569) ................++.... ...+........|+||.|+... .++..+++.|++.+ .+.++++. T Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~gg~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~~~~~~~~ 382 (663) T protein:vir:10 304 GSNIFMDDYFRNGGSNFIFASS-EGWPAGFTGIIQLGGGTSANADVGADELIKGWDLFSDREALHVNLMIAGACGSDGAE 382 (663) T ss_pred cchhhhhhhhcCCcceEEEEee-cccCccccceeEeccccCCccccchhhhHHHHHhhhcccccceeEEEeccCCCCchh Confidence 0000000000011122332221 1222222334579999998643 46888888887654 33333322 Q ss_pred CCHHHHHHHHHHHHHHhcCCCeEEEEEcCCCCC--------CHHHHHHHh-------------hhcCCceEEEEecccee Q lcl|Aclame:pro 322 DKQAVHSEALAFVKDRTDNGDPMRIIVGGGTNE--------TVEESITRA-------------TNLRDPRASLVGFSGTR 380 (569) Q Consensus 322 ~d~~v~~~l~~~v~~~~~~g~~~~~vv~~~~~~--------~~~~~~~~a-------------~~~n~~~v~~v~~~~~~ 380 (569) ....++.++.+||+++++ ++++++.+... +.+++..+. ..|+|++.++++||... T Consensus 383 ~~~~v~~~l~~~a~~~~~----~~ai~d~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~p~~~~ 458 (663) T protein:vir:10 383 IASTVQKYVVSLADDRQD----CVAIVNPPAELMVGIPTSTAVKNIVEWRNGMTGSGEVVDNNMNISSTYAFIIGNYKYQ 458 (663) T ss_pred hHHHHHHHHHHHHHhhCC----EEEEEecCcccccccccccchHHHHHHHHhccccccchhhhcccCccceEEEcCceEE Confidence 124678889999998754 99999877532 344444433 35889999999999764 Q ss_pred c-cCCcceeeechHHHHHHHHHHhhcCc----hhcCccceeec----cccccccCCHHHHHHHHhcCcEEEEEecCCcce Q lcl|Aclame:pro 381 K-MDDGRLLKLPGYMMASQIAGIASGLE----VGEAITFKHFN----VTSVDRVFESSQLDMLNESGVISIEFVRNRTLT 451 (569) Q Consensus 381 ~-~~~g~~~~~~~~~~aa~vAG~~A~~~----~~~s~T~~~~~----~~~~~~~~t~~e~~~l~~~Gv~~l~~~~~~~~~ 451 (569) . ..++..+.+|++ +++||++|..+ +++||.|+.+. ..++...+++.|++.|+++|++|++...+ .. T Consensus 459 ~d~~~~~~~~~p~s---g~vAGl~Ar~D~~~g~~~sPan~~~~~i~g~~~~~~~~~~~e~~~Ln~~gin~i~~~~~--~~ 533 (663) T protein:vir:10 459 YDKYNDINRWVPLA---ADIAGLCAYTDQVSHPWMSPAGYRRGQIRNCIKLAIEPKQSMRDTMYQVAINPVTGFAG--GD 533 (663) T ss_pred ecccCCceEEechh---HHHHHHHHHhhccCCceEccCCceeccccccccceeecChhHHHHHhhCCceEEEEEeC--CC Confidence 3 345555666764 88888888877 67799998653 45778889999999999999999976432 25 Q ss_pred EEEEeeceeccCCCCchhhhhhhHHHHHHHHHHHHHHHHHhcCCcccCChHHHHHHHHHHHHHHHHHHhCCcccCCCc-- Q lcl|Aclame:pro 452 AFRVVQDVTTYNDKSDPVKNEMSVGEANDFLVSELKIELDNNFIGTKVIDTSASLIKNFIQSFLDNKKRAREIQDYTP-- 529 (569) Q Consensus 452 ~~ri~~~itT~~~~~d~~~~~i~v~R~~d~i~~~i~~~~~~~~iGk~nn~~~~~~v~~~i~~~L~~l~~~gaI~~~~~-- 529 (569) ++|+|.+.|..+ ++..|++|++||++|+|+++|++.. .+|+||||++.+|..|+..|+.||.+||++|+|.+|.. T Consensus 534 G~~~wG~rT~~~--~~s~~~~i~vrR~~~~i~~si~~~~-~~~v~epn~~~l~~~i~~~i~~~L~~l~~~gal~g~~v~~ 610 (663) T protein:vir:10 534 GFVLFGDKMATQ--VPSPFDRINVRRLFNMLKKNIGDTS-KYELFENNDAFTRQSFRMETSQYLDGIRSLGGCYDFRVVC 610 (663) T ss_pred cEEEEcccccCC--CCcccceEehhhHHHHHHHHHHHHH-HHhccCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeEEEE Confidence 789999988632 3357999999999999999999986 58999999999999999999999999999999999743 Q ss_pred ---cccEEecCCCEEEEEEEEEEccceeEEEEEEEEEeeeeeC Q lcl|Aclame:pro 530 ---EEVQVVLEGDVASISMTVMPIRSLNKITVQLVYKQQILTA 569 (569) Q Consensus 530 ---~d~~v~~~~d~~~v~~~v~pv~~~e~I~~ti~v~~~~~~~ 569 (569) .+.+.++++++++|++.++|++|+|||+++|.....-++- T Consensus 611 d~~~nt~~~i~~G~~~~~i~~~p~~pae~i~~~~~~~~~~~~~ 653 (663) T protein:vir:10 611 DTTNNTPNVIDRNEFVGTIYVKPPRSINYITLNMVATSTGANF 653 (663) T ss_pred cCCCCCHHHhhCCeEEEEEEEEecCCcceEEEEEEEeecCccH Confidence 2235567889999999999999999999999844322222 No 16 >protein:vir:106984 Length: 743 # NCBI annotation: contractile sheath protein gp18 # Family: family:all:661 # MgeID: mge:1459 # MgeName: S-PM2 # Cross-refs: genbank:acc:YP_195136;genbank:gi:58532913;uniprot:Q5GQN6;genbank:GeneID:3260481 Probab=100.00 E-value=9.5e-72 Score=409.96 Aligned_cols=547 Identities=13% Similarity=0.079 Sum_probs=319.3 Q ss_pred CcceecCceEEEEEcCCCccccCCCCceEEEEeccCCCCCceeEEEcChHHHHHHhcCcchHHHHHHHhhhhhhhccCCc Q lcl|Aclame:pro 8 RKKVSRPHTEITVDTSGIGGSSSSSDKTLMLVGSAKGGKPDTVYRFRNYQQAKQVLRSGDLLDAIELAWNASDVNTASAG 87 (569) Q Consensus 8 ~~~~~~PGvyi~~~~~~~~~~~~~~~~~~~~~g~a~~G~~~~~~~i~~~~~~~~~fg~g~l~~~~~~~~~~~~~~~~g~~ 87 (569) +-.|++|||||+|.+++.++++++++++.+|+|.++|||+++|++|+||+||++.||+- .+.-.+.|....+|+|||+ T Consensus 1 m~~~~~Pgvyv~e~~~~~~~i~~~~t~~~~~vg~~~~Gp~~~p~~i~s~~~~~~~fG~~--~~~~~~~~~v~~~f~ngg~ 78 (743) T protein:vir:10 1 MASQVSPGILIKERDLTNAVVTGALQIRAAHASTFAKGPIGDIVNINTQKELVSVFGEP--KEDNAEDWMVASEFLNYGG 78 (743) T ss_pred CccccCCceEEEEecCCCceeccCCcceeEEEEeccCCCCCcCEEecCHHHHHHHcCCc--cCCcchHHHHHHHHHhCCc Confidence 55689999999999999999999999999999999999999999999999999999962 1222334444455589999 Q ss_pred eEEEEEcCCC--cccee----------------eccceEEEEecCCcccceeEEEEecCCCCcceEEEEEecCC--ceee Q lcl|Aclame:pro 88 DILAVRVEDA--KNATL----------------TKGGLTFASTIYGVDANEIQVALEDNNLTHTKRLTVAFSKD--GYKK 147 (569) Q Consensus 88 ~~~~~rv~~~--~~a~~----------------~~~~l~~~a~~~G~~gn~i~v~~~~~~~~~~~~~~~~~~~~--~~~~ 147 (569) +||++|+.+. .+|+. ....++++|++||.|||.++|.+.+...+...++....... .... T Consensus 79 ~~~vvrv~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~G~~gN~i~V~v~~~~~d~~~~~~~~~~~~~~~~~~ 158 (743) T protein:vir:10 79 RLAVVRAETTGVLNATTGSAGVLVKNRESWDAGSGNGEVFVARTAGSWGNSLMGVLVDRGADYIVTFAATPTDTAVGTQL 158 (743) T ss_pred eEEEEEccCccccccccccccccccccccccccccceeEEEEeeccccccceEEEEecCCCcceeeeeccccccccceee Confidence 9999999542 22221 12368999999999999999999876433322221110000 0000 Q ss_pred e--------------cccccceeEEEecCcccceeEEE----------------EecCccceeeeeeec--cccccccce Q lcl|Aclame:pro 148 V--------------FDNLGKIFSIQYKGSEAQANFTI----------------AQDSISKKATTLTLN--VGSEPESTT 195 (569) Q Consensus 148 ~--------------~~~~~~~~~v~~~G~~a~a~~~v----------------~~~~~s~~~~~lt~~--~~~~~~~~~ 195 (569) . .....+...+...+....+.... ............... .+......+ T Consensus 159 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tv 238 (743) T protein:vir:10 159 LFSYSGTLVTGEILSYDSATNTATITASGTLTSQYLLDTPEQGLIGSFTDNSTTEVGRTPGTYSNVPASGGTGTGATFNV 238 (743) T ss_pred eecccccccccceeeeeecCcceeeeeccccceeeecccccccccccccccccccccccccceeeEEecccccccccccc Confidence 0 00000000000000000000000 000000000000000 000000000 Q ss_pred eeeecc-------------------cc---------ccccceehhhhhhcc-cccceeEEecccCCcceecccc--cch- Q lcl|Aclame:pro 196 EVMKYE-------------------LG---------QGVYSETNVLVSAIN-SLPDWEAKFFPIGDKNLPTDAL--EAV- 243 (569) Q Consensus 196 ~v~~~~-------------------l~---------~~~~~~~~~~~~~i~-~~~~~~~~~~~~~~~~~~~~~~--d~~- 243 (569) .+.... .. ..............+ ......+.........+..... +.. T Consensus 239 ~v~~~~~~vg~~v~~~~~~~~~~~~~~~~~~v~~~~~~~~t~~~~~~~~~~~g~~~~~a~~~~~~~~~~~~~~~~~~~~~ 318 (743) T protein:vir:10 239 VVADAGGGVGGSVVVTLANPGTGYNQGETLTIASAATGDGTDILVTVATLSDGTIAITELKDWYLNTEIGSTGIKLGDIG 318 (743) T ss_pred cccccccccccccccccccccceeeeccccccccccccccccchhheecccccceeeeecccccccchhhcccccccccc Confidence 000000 00 000000000000000 0000000000000000000000 000 Q ss_pred ----hhccc-----c---------cc------------c-eeehhhhhhhhh----------hh-ccCceEEEE------ Q lcl|Aclame:pro 244 ----TKVDV-----K---------TE------------A-VFVGALAGDIAK----------QL-EYNDYVTVA------ 275 (569) Q Consensus 244 ----~~~~~-----~---------~~------------~-~~~~~~~~~~~~----------~~-~~~~~v~~~------ 275 (569) ..... . +. . ..+.+...+... .+ ..+.++... T Consensus 319 ~~~~t~~~~~~~~~~~d~~~v~v~~~~~~~~~~~~~v~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~ 398 (743) T protein:vir:10 319 PRPGTSQFATDNGITDDQVHFAVIDTTGELTGTANTIVERLTYLSKLSDARSEENANIYYKNVINEQSAYLYHGNDAAVQ 398 (743) T ss_pred ccceeeeccccccccccceEEEEecCcceeeeccCceeEEEeeeecccccccccCcceeecceeccccceeeccCcccce Confidence 00000 0 00 0 000000000000 00 000111000 Q ss_pred ------------------eccCccccccceeeeecCCCCCc--hhHHHHHHHHHHhc---CccEEEecC------CCHHH Q lcl|Aclame:pro 276 ------------------VDATKPVEDFELTNLTGGSDGTA--PESWANKFPLLANE---GGYYLVPLT------DKQAV 326 (569) Q Consensus 276 ------------------~~~~~~~a~~~~~~LtGG~dg~~--~~~~~~~l~~le~~---~~~~i~~~~------~d~~v 326 (569) ..............|.||.|+.. ..++..++..|+.. ++.+++++. ...++ T Consensus 399 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gG~d~~~~~~~~~~~~~~~~~~~~~~~~~ll~~p~~~~~~~~~~~v 478 (743) T protein:vir:10 399 IAASGEAWGQSSDQVLADAGTAFSRTTGYWVNLAGGNDDFAYDAGEFGAAMDLFLDTEETEIDFVLMGGSMADEADTKSK 478 (743) T ss_pred eeeccccCccccceeeeecccccccccceEEEeecCccccccchhHHHHHHHHhhhccccCcceEEecCcccCccchHHH Confidence 00000111122357899999864 34677777777654 345555442 23678 Q ss_pred HHHHHHHHHHHhcCCCeEEEEEcCCCCC--------------C-HHHHHHHhhhcCCceEEEEeccceec-cCCcceeee Q lcl|Aclame:pro 327 HSEALAFVKDRTDNGDPMRIIVGGGTNE--------------T-VEESITRATNLRDPRASLVGFSGTRK-MDDGRLLKL 390 (569) Q Consensus 327 ~~~l~~~v~~~~~~g~~~~~vv~~~~~~--------------~-~~~~~~~a~~~n~~~v~~v~~~~~~~-~~~g~~~~~ 390 (569) +.++.+||+++++ ++++++.+... + .+....+...++++++++++||+... ..++....+ T Consensus 479 ~~a~~~~~~~~~~----~~a~~d~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~p~~~~~d~~~~~~~~~ 554 (743) T protein:vir:10 479 ATKVIAIAASRKD----ALAFVSPHKGNQIASTGNVALSSAQQKENTIAFFSDLTSTSYAVFDSGYKYVYDRFTDKYRYI 554 (743) T ss_pred HHHHHHHHHhhCC----eEEEEecCCCccccccccccccccccchHHHHHHHhccCCeeEEEEccceeeeccccCceeEe Confidence 8999999988754 99999877532 1 23444556678899999999997543 334555666 Q ss_pred chHHHHHHHHHHhhcCc----hhcCccceeec----cccccccCCHHHHHHHHhcCcEEEEEecCCcceEEEEeeceecc Q lcl|Aclame:pro 391 PGYMMASQIAGIASGLE----VGEAITFKHFN----VTSVDRVFESSQLDMLNESGVISIEFVRNRTLTAFRVVQDVTTY 462 (569) Q Consensus 391 ~~~~~aa~vAG~~A~~~----~~~s~T~~~~~----~~~~~~~~t~~e~~~l~~~Gv~~l~~~~~~~~~~~ri~~~itT~ 462 (569) |++ +++||++|..+ +++||.|+.+. ..++...+++.|++.|+++|++|+++.+ +.++|+|.+.|.. T Consensus 555 p~s---~~~AGl~a~~D~~~g~~~span~~~~gi~g~~~~~~~~~~~~~~~Ln~~gIn~i~~~~---~~G~~~wG~rT~~ 628 (743) T protein:vir:10 555 PCN---GDVAGLCVQTSNQLDDWYSPAGLNRGGILNAVKLAYNPNKADRDELYQNRINPVVSLR---GQGITLFGDKTAL 628 (743) T ss_pred chh---HHHHHHHHHhhccCCcEEccCCeeeeeeeccccceecCChhHHHhHhhCCceEEEEec---CCeEEEEcccccC Confidence 664 88889998885 77899999864 2356667899999999999999997643 4579999998862 Q ss_pred CCCCchhhhhhhHHHHHHHHHHHHHHHHHhcCCcccCChHHHHHHHHHHHHHHHHHHhCCcccCCCc-----cccEEecC Q lcl|Aclame:pro 463 NDKSDPVKNEMSVGEANDFLVSELKIELDNNFIGTKVIDTSASLIKNFIQSFLDNKKRAREIQDYTP-----EEVQVVLE 537 (569) Q Consensus 463 ~~~~d~~~~~i~v~R~~d~i~~~i~~~~~~~~iGk~nn~~~~~~v~~~i~~~L~~l~~~gaI~~~~~-----~d~~v~~~ 537 (569) +.|+.|++|++||++|+|+++|++.+ .+|++|||++.+|..|+..|+.||..||++|+|++|.. .+.+.+++ T Consensus 629 --s~d~~~~~i~vrR~~~~i~~si~~~~-~~~v~e~n~~~~~~~i~~~i~~fL~~l~~~gal~~~~V~~d~~~nt~~~i~ 705 (743) T protein:vir:10 629 --AAPSAFDRINVRRLFLNLEKRARRLA-EGVLFEQNDATTRAGFSSALNSYLSEVQARRGVTDYLVICDESNNTPDIID 705 (743) T ss_pred --CCCcccceEeehhhHHHHHHHHHHHH-HHhccCCCCHHHHHHHHHHHHHHHHHHHhcCceeeeEEEEcCCCCCHHHhh Confidence 45789999999999999999999987 58999999999999999999999999999999998743 12344677 Q ss_pred CCEEEEEEEEEEccceeEEEEEEEEEeeeeeC Q lcl|Aclame:pro 538 GDVASISMTVMPIRSLNKITVQLVYKQQILTA 569 (569) Q Consensus 538 ~d~~~v~~~v~pv~~~e~I~~ti~v~~~~~~~ 569 (569) +++++|++.++|++|||||++||..+..-.+= T Consensus 706 ~G~~~~~i~~~p~~pae~I~~~~~~~~~~~~~ 737 (743) T protein:vir:10 706 RNEFVAEVYVKPTRSINFITITFTATKTGVTF 737 (743) T ss_pred CCeEEEEEEEEecCCcceEEEEEEEeecCcch Confidence 89999999999999999999999844332222 No 17 >protein:vir:6894 Length: 660 # NCBI annotation: gp18 tail sheath protein # Family: family:all:661 # MgeID: mge:140 # MgeName: RB69 # Cross-refs: genbank:acc:NP_861870;genbank:gi:32453661;genbank:GeneID:1494296 Probab=100.00 E-value=3.6e-71 Score=406.80 Aligned_cols=547 Identities=15% Similarity=0.117 Sum_probs=317.9 Q ss_pred cceecCceEEEEEcCCCccccCCCCceEEEEeccCCCCCceeEEEcChHHHHHHhcCcchHHHHHHHhhhhhhhccCCce Q lcl|Aclame:pro 9 KKVSRPHTEITVDTSGIGGSSSSSDKTLMLVGSAKGGKPDTVYRFRNYQQAKQVLRSGDLLDAIELAWNASDVNTASAGD 88 (569) Q Consensus 9 ~~~~~PGvyi~~~~~~~~~~~~~~~~~~~~~g~a~~G~~~~~~~i~~~~~~~~~fg~g~l~~~~~~~~~~~~~~~~g~~~ 88 (569) =+|++|||||||.+ +.+++++++|++++|+|.++|||+++|++|+||.||++.||+- .+.-.+.|....+|+|||++ T Consensus 1 ~~~~~PgVyv~e~~-~~~~i~~v~ts~~~fvG~~~~Gp~~~p~~i~s~~~~~~~fG~~--~~~~~~~~~~~~~f~~~g~~ 77 (660) T protein:vir:68 1 MALLSPGVELKETT-VQSTVVNNSTGTAALAGKFQWGPAFQIKQITDEVALVDMFGTP--NTDTADYFMSAMNFLQYGND 77 (660) T ss_pred CccccCceEEEEec-CCcccccCCCcceeEEecccCCCCccCEEecCHHHHHHhcCCc--cCccchhHHHHHHHHhCCCe Confidence 78999999999995 8899999999999999999999999999999999999999962 22233344455566899999 Q ss_pred EEEEEcCCCcc---ceeeccceEEEEecCCc---ccceeEEEEecCCCCcceEEEEEecCCceee--------------- Q lcl|Aclame:pro 89 ILAVRVEDAKN---ATLTKGGLTFASTIYGV---DANEIQVALEDNNLTHTKRLTVAFSKDGYKK--------------- 147 (569) Q Consensus 89 ~~~~rv~~~~~---a~~~~~~l~~~a~~~G~---~gn~i~v~~~~~~~~~~~~~~~~~~~~~~~~--------------- 147 (569) ||++|+.++.. +++..+.+.+++..+|. +|+.++++....................... T Consensus 78 ~~vvRv~~~~~~~~~~~~~~~~~~t~~~~g~~~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ta~~~~~a~~~ 157 (660) T protein:vir:68 78 LRVVRAVDRDTAKNSSPVAGNINFTISSAGTNYRVGDKVVVKYSTDIIEPDGEVTSVDSDGKILNIFIPSGKIIAKAKEI 157 (660) T ss_pred EEEEEecccccccccccccccceeeeeccCcceeeeeeeeeecccccccccccceeeeecCceeeeeeccccccccceee Confidence 99999854332 34445667888888884 8988888654321111111111111110000 Q ss_pred -ecccccceeEEEecCcccceeEEEEecCccc-eeeeeee-c-ccccc-ccc-e----------eeeeccccccccceeh Q lcl|Aclame:pro 148 -VFDNLGKIFSIQYKGSEAQANFTIAQDSISK-KATTLTL-N-VGSEP-EST-T----------EVMKYELGQGVYSETN 211 (569) Q Consensus 148 -~~~~~~~~~~v~~~G~~a~a~~~v~~~~~s~-~~~~lt~-~-~~~~~-~~~-~----------~v~~~~l~~~~~~~~~ 211 (569) .+...+.-....+..........+..+.... ....+.. . ..... ... . .+..+.-..+..-.+. T Consensus 158 ~~~~~~~~~~~~~v~~~~~~~~~~~~v~~~~~d~~~~~~~~~ta~~~~~~~~~~~~~~~~~~~~~~A~~~g~~G~~i~v~ 237 (660) T protein:vir:68 158 GEYPELGSNWTAEMSGSSSGLSAVITIDSVVMDSGILLTEVETSEEAITSLTFQESIKKYGVPGVVALYPGELGDQLEIE 237 (660) T ss_pred ccccccccceeEEeecccccceeeeeeccccccccceeeeeccccccccccceeeeecccCccccccccccccccceEEE Confidence 0000011111111111111111111110000 0000000 0 00000 000 0 0000000000000000 Q ss_pred hhhhh-------ccc---------ccceeEEeccc---CC--cceecccccchhhc-cccc----cceeehhhhhhhhhh Q lcl|Aclame:pro 212 VLVSA-------INS---------LPDWEAKFFPI---GD--KNLPTDALEAVTKV-DVKT----EAVFVGALAGDIAKQ 265 (569) Q Consensus 212 ~~~~~-------i~~---------~~~~~~~~~~~---~~--~~~~~~~~d~~~~~-~~~~----~~~~~~~~~~~~~~~ 265 (569) .... ... .+.....+... .+ ..+.....+..... .... +.............. T Consensus 238 -~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (660) T protein:vir:68 238 -IVSKADYDKGASAQLKIYPDGGTRYSTAKAIFGYGPQTDDQYAIIVRRNDSVVQSVVLSTKRGERDIYGSNIFIDDFFA 316 (660) T ss_pred -EeccccccccccccceeeecccccccceeeEeecccccccceeeeeecCCcceeeeeeecccccccccccceeeehhhc Confidence 0000 000 00000000000 00 00000000000000 0000 000000000000000 Q ss_pred hccCceEEEEeccCccccccceeeeecCCCCCch---hHHHHHHHHH---HhcCccEEEecCC-------CHHHHHHHHH Q lcl|Aclame:pro 266 LEYNDYVTVAVDATKPVEDFELTNLTGGSDGTAP---ESWANKFPLL---ANEGGYYLVPLTD-------KQAVHSEALA 332 (569) Q Consensus 266 ~~~~~~v~~~~~~~~~~a~~~~~~LtGG~dg~~~---~~~~~~l~~l---e~~~~~~i~~~~~-------d~~v~~~l~~ 332 (569) -..+.++.+... ..+........+.||.|+... .++..+++.+ +..+.+.+.++.. ..+++.++.+ T Consensus 317 ~~~~~~v~~~~~-~~~~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~v~~~l~~ 395 (660) T protein:vir:68 317 KGASNYIFATAQ-GWPKGFSGVIKLNGGLSSNETVEAGDLMEAWDLFADRESVNAQLFIAGSCAGESLEVASTVQKHVVA 395 (660) T ss_pred cCcccEEEEeec-CCCccccceeeeccccccccccccchhhhHHHHhhhhhccccceeeccccCCCchHHHHHHHHHHHH Confidence 122334433222 222233334578999887532 2455555554 4444444444321 1367889999 Q ss_pred HHHHHhcC----CCeEEEEEcCCCCCCHHHHHHHhh----------hcCCceEEEEeccceec-cCCcceeeechHHHHH Q lcl|Aclame:pro 333 FVKDRTDN----GDPMRIIVGGGTNETVEESITRAT----------NLRDPRASLVGFSGTRK-MDDGRLLKLPGYMMAS 397 (569) Q Consensus 333 ~v~~~~~~----g~~~~~vv~~~~~~~~~~~~~~a~----------~~n~~~v~~v~~~~~~~-~~~g~~~~~~~~~~aa 397 (569) ||+++++. ...++++++.+...+++++++... .|+|.++++++||+... ..++..+.+|++ + T Consensus 396 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~p~~~~~d~~~~~~~~~p~s---g 472 (660) T protein:vir:68 396 IGDSRQDCLVLCSPPRAAVVGIPVNRAVDNLVDWRTASGTYTDNNFNISSTYAAIDGNYKYQYDKYNDVNRWVPLA---A 472 (660) T ss_pred HHHhhCCeEEEEcccceeEecCCCCCCHHHHHHHHhhcccccccccccCcceEEEEcCceEEecccCCceEEechh---H Confidence 99988651 123444455556677888877655 37899999999997543 334555666664 7 Q ss_pred HHHHHhhcCc----hhcCccceeec----cccccccCCHHHHHHHHhcCcEEEEEecCCcceEEEEeeceeccCCCCchh Q lcl|Aclame:pro 398 QIAGIASGLE----VGEAITFKHFN----VTSVDRVFESSQLDMLNESGVISIEFVRNRTLTAFRVVQDVTTYNDKSDPV 469 (569) Q Consensus 398 ~vAG~~A~~~----~~~s~T~~~~~----~~~~~~~~t~~e~~~l~~~Gv~~l~~~~~~~~~~~ri~~~itT~~~~~d~~ 469 (569) ++||++|..+ +++||.|+.+. ..++...+++.|++.|+++|++++++. .+.++|+|.+.|..+ ++.. T Consensus 473 ~~AGl~Ar~d~~~g~~~span~~~~~i~g~~~~~~~~~~~~~~~Ln~~gIn~i~~~---~~~G~~~wG~rT~~~--~~s~ 547 (660) T protein:vir:68 473 DIAGLCARTDNISQPWMSPAGYNRGQILNVIKLAIETRQAQRDRLYQEAINPVTGT---GGDGYVLYGDKTATS--VPSP 547 (660) T ss_pred HHHHHHHHHhccCCcEEccCCeeeceeeccceeeecCChhHHHHHhhCCceEEEEe---cCCeEEEEcceecCC--CCcc Confidence 8888888777 88899998764 346777889999999999999999764 455799999998632 3457 Q ss_pred hhhhhHHHHHHHHHHHHHHHHHhcCCcccCChHHHHHHHHHHHHHHHHHHhCCcccCCCc-----cccEEecCCCEEEEE Q lcl|Aclame:pro 470 KNEMSVGEANDFLVSELKIELDNNFIGTKVIDTSASLIKNFIQSFLDNKKRAREIQDYTP-----EEVQVVLEGDVASIS 544 (569) Q Consensus 470 ~~~i~v~R~~d~i~~~i~~~~~~~~iGk~nn~~~~~~v~~~i~~~L~~l~~~gaI~~~~~-----~d~~v~~~~d~~~v~ 544 (569) |++|++||++++|+++|++.+ .+|++|||++.+|..|+..|+.||..||++|+|.||.. .+.+.++++++++|+ T Consensus 548 ~~~i~vrR~~~~i~~si~~~~-~~~v~epn~~~~~~~i~~~i~~~L~~l~~~gal~gf~V~~d~~~nt~~~i~~G~~~~~ 626 (660) T protein:vir:68 548 FDRINVRRLFNMVKTNIGSAS-KYRLFELNNAFTRSSFRTETSQYLQGIKALGGVYNFKVVCDTTNNTPAVIDRNEFVAT 626 (660) T ss_pred cceEehhhHHHHHHHHHHHHH-HHhccCCCCHHHHHHHHHHHHHHHHHHHhcCceeeeEEEEecCCCCHHHhhCCeEEEE Confidence 999999999999999999986 58999999999999999999999999999999999743 233556788999999 Q ss_pred EEEEEccceeEEEEEEEEEeeeeeC Q lcl|Aclame:pro 545 MTVMPIRSLNKITVQLVYKQQILTA 569 (569) Q Consensus 545 ~~v~pv~~~e~I~~ti~v~~~~~~~ 569 (569) +.++|++|||||+++|...-.-++- T Consensus 627 i~~~p~~pae~i~l~~~~~~~~~~~ 651 (660) T protein:vir:68 627 FYLQPARSINYITLNFVATATGADF 651 (660) T ss_pred EEEEecCCcceEEEEEEEeecCccH Confidence 9999999999999999844332221 No 18 >protein:vir:106427 Length: 679 # NCBI annotation: gp18 tail sheath protein # Family: family:all:661 # MgeID: mge:1474 # MgeName: Aeh1 # Cross-refs: genbank:acc:NP_944106;genbank:gi:38640150;genbank:GeneID:2658188 Probab=100.00 E-value=5.5e-71 Score=405.79 Aligned_cols=532 Identities=16% Similarity=0.144 Sum_probs=316.4 Q ss_pred cceecCceEEEEEcCCCccccCCCCceEEEEeccCCCCCceeEEEcChHHHHHHhcCcchHHHHHHHhhhhhhhccCCce Q lcl|Aclame:pro 9 KKVSRPHTEITVDTSGIGGSSSSSDKTLMLVGSAKGGKPDTVYRFRNYQQAKQVLRSGDLLDAIELAWNASDVNTASAGD 88 (569) Q Consensus 9 ~~~~~PGvyi~~~~~~~~~~~~~~~~~~~~~g~a~~G~~~~~~~i~~~~~~~~~fg~g~l~~~~~~~~~~~~~~~~g~~~ 88 (569) =+|++|||||||.+ +.+++++++|++++|+|.++|||+++|++|+||.||++.||+ +.+.-.+.|....+|+|||++ T Consensus 1 ~~~~~Pgvyv~e~~-~~~~i~~~~t~~~~~vg~~~~gp~~~p~~i~s~~~~~~~fg~--~~~~~~~~~~~~~~f~~gg~~ 77 (679) T protein:vir:10 1 MTLLSPGVETKEIN-LQTTIARSSTGRAALVGKFNWGPAYQISQVVSEVDLVDKFGR--PDDQTADSFFSGVNFLNYGND 77 (679) T ss_pred CceecCceEEEeec-CCcccccCccccceeeecccCCCCccCEEecCHHHHHHHcCC--cccccchHHHHHHHHHhCCCe Confidence 78999999999996 789999999999999999999999999999999999999997 233344555566667999999 Q ss_pred EEEEEcCCCcc---ceeeccceEEEEecCCc---ccceeEEEEecCCCCcceEEEEEecCCceeeec------------- Q lcl|Aclame:pro 89 ILAVRVEDAKN---ATLTKGGLTFASTIYGV---DANEIQVALEDNNLTHTKRLTVAFSKDGYKKVF------------- 149 (569) Q Consensus 89 ~~~~rv~~~~~---a~~~~~~l~~~a~~~G~---~gn~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~------------- 149 (569) ||++|+.++.+ +.+..+.+.+++..+|. +||.+++...... .....++............ T Consensus 78 ~~vvrv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~s~-~~~~~~~~~~~~~~~~~~~v~~~~~~~~a~~~ 156 (679) T protein:vir:10 78 LRLVRVLNETKSRNSSALYQSLSYTITSPGVDYKVGDVVNVLQGGNV-IATGKVTVVNASGGIVAFYVPTAAIIDKAKSL 156 (679) T ss_pred EEEEEccCcccccccccccccccccccccccccccccceeeeeCCCc-ccceeEEEeeccCceeeeeecccccccccccc Confidence 99999965543 33445667888888885 7888887543221 1222222221111100000 Q ss_pred ---ccccceeEEEe-cCcc---cceeEEEE--ecCccceeeeeeeccccccccceeeeeccccccccceehhhhhhcccc Q lcl|Aclame:pro 150 ---DNLGKIFSIQY-KGSE---AQANFTIA--QDSISKKATTLTLNVGSEPESTTEVMKYELGQGVYSETNVLVSAINSL 220 (569) Q Consensus 150 ---~~~~~~~~v~~-~G~~---a~a~~~v~--~~~~s~~~~~lt~~~~~~~~~~~~v~~~~l~~~~~~~~~~~~~~i~~~ 220 (569) ........+.+ .+.. ......+. ..+.. .... ..+. ...... .+ ........... ..... T Consensus 157 ~~~~~l~~a~~~~~~~~t~~~g~~~~~~v~~v~~~~~---~~~~-~~~~----a~~~i~-~~-~~~~~t~~~~~-~~~~~ 225 (679) T protein:vir:10 157 NDYPALDNAWQIQFAAGGPGAGQAATATVVGINLDST---IFVP-NDEY----AMSAIS-ER-SETKRTFIDIC-EEMKV 225 (679) T ss_pred cccceecccceeeeeeccccccceeeeeeeeeccCCc---eeec-cccc----cccccc-cc-cccchhhhhhh-hcccc Confidence 00000000000 0000 00000000 00000 0000 0000 000000 00 00000000000 00000 Q ss_pred cceeEEecccCCcce--------------------ecccccc-----------hh--h-cc--cccc--ce-eehhh--h Q lcl|Aclame:pro 221 PDWEAKFFPIGDKNL--------------------PTDALEA-----------VT--K-VD--VKTE--AV-FVGAL--A 259 (569) Q Consensus 221 ~~~~~~~~~~~~~~~--------------------~~~~~d~-----------~~--~-~~--~~~~--~~-~~~~~--~ 259 (569) +...+...+..+..+ .....+. .. . .. .... .. .+... . T Consensus 226 ~~~~A~~~g~~gn~i~v~~va~~~~~~~~~~~a~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvv~~~g~~ 305 (679) T protein:vir:10 226 PAIVARYAGTYGDNIKVLMIAYKDYYKFNEAGKIVSVNTINPKVFPTGLDYGNVTPSSYLEFGPQNESQFAFIVFNNGVA 305 (679) T ss_pred ceeeeecccccCCcceEEEEeecccccccccccccccccccccccccccccccceeeeecccccccccceeeEEeccccc Confidence 111111111000000 0000000 00 0 00 0000 00 00000 0 Q ss_pred ----------hh--------hhhhhc---cCceEEEEeccCccccccceeeeecCCCCCch---hHHHHHHHHHHhc--- Q lcl|Aclame:pro 260 ----------GD--------IAKQLE---YNDYVTVAVDATKPVEDFELTNLTGGSDGTAP---ESWANKFPLLANE--- 312 (569) Q Consensus 260 ----------~~--------~~~~~~---~~~~v~~~~~~~~~~a~~~~~~LtGG~dg~~~---~~~~~~l~~le~~--- 312 (569) .+ ...... ...++.... ...+........|+||.|+... .++.+++..++.. T Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (679) T protein:vir:10 306 VESKILSTKPGDRDIYGTSIYINEYFGNGYSSFVQGVA-ESWPVGYTGVLAFGGGQSSNTDISAAEFMKGWDMFADREHT 384 (679) T ss_pred ccceeeecccccccccchhhhhhhhhcCcccceeeecc-ccccccccceeeccCCccCCCccchhhhhhhhhhhhccccc Confidence 00 000000 011111110 1111222234578899987543 3566666655443 Q ss_pred CccEEEecCC-------CHHHHHHHHHHHHHHhcCCCeEEEEEcCCCC--------CCHHHHHHHhh------------- Q lcl|Aclame:pro 313 GGYYLVPLTD-------KQAVHSEALAFVKDRTDNGDPMRIIVGGGTN--------ETVEESITRAT------------- 364 (569) Q Consensus 313 ~~~~i~~~~~-------d~~v~~~l~~~v~~~~~~g~~~~~vv~~~~~--------~~~~~~~~~a~------------- 364 (569) +.++++++.. ..+++.++.+||+++++ ++++++++.. ...++++.... T Consensus 385 ~~~~l~~p~~~~~~~~~~~~v~~~l~~~~~~~~~----~~ai~d~p~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~ 460 (679) T protein:vir:10 385 DVNLFIAGAVAGEGAQIASTVQKAVVAIADERRD----CLVLISPPREYMINQPAASVVRKLVDWRRGVNQAGISLDDNM 460 (679) T ss_pred ccceEEecCCCCCchhhhHHHHHHHHHHHHhhCC----eEEEEeccccccccccccchHHHHHHHHhhcccccchhhhhh Confidence 4455554431 25689999999999864 8999876643 33455555443 Q ss_pred hcCCceEEEEeccceec-cCCcceeeechHHHHHHHHHHhhcCc----hhcCccceeec----cccccccCCHHHHHHHH Q lcl|Aclame:pro 365 NLRDPRASLVGFSGTRK-MDDGRLLKLPGYMMASQIAGIASGLE----VGEAITFKHFN----VTSVDRVFESSQLDMLN 435 (569) Q Consensus 365 ~~n~~~v~~v~~~~~~~-~~~g~~~~~~~~~~aa~vAG~~A~~~----~~~s~T~~~~~----~~~~~~~~t~~e~~~l~ 435 (569) .|+|.+.++++||.... ..++..+.+|++ +++||++|..+ +++||+|+.+. ..++...+++.|++.|+ T Consensus 461 ~~~s~~~~~~~p~~~~~d~~~~~~~~~p~s---g~vAGl~Ar~D~~~g~~~sPan~~~~~i~g~~~~~~~~~~~~~~~Ln 537 (679) T protein:vir:10 461 NIGTTYASVDGNYKYQYDKYNDVNRWIPLA---ADIAGLCARTDTVGQPWQSPAGFNRGQIVNVIKLAVDTRQAHRDEMY 537 (679) T ss_pred ccCcceEEEEccceeeecccCCceEEechH---HHHHHHHHHhhccCCcEECcCCeeeccccccccceeecChhhHHhhh Confidence 47789999999998643 345555666764 88888888876 88899998763 34677789999999999 Q ss_pred hcCcEEEEEecCCcceEEEEeeceeccCCCCchhhhhhhHHHHHHHHHHHHHHHHHhcCCcccCChHHHHHHHHHHHHHH Q lcl|Aclame:pro 436 ESGVISIEFVRNRTLTAFRVVQDVTTYNDKSDPVKNEMSVGEANDFLVSELKIELDNNFIGTKVIDTSASLIKNFIQSFL 515 (569) Q Consensus 436 ~~Gv~~l~~~~~~~~~~~ri~~~itT~~~~~d~~~~~i~v~R~~d~i~~~i~~~~~~~~iGk~nn~~~~~~v~~~i~~~L 515 (569) ++|+++|++. .+.++|+|.+.|..+ .+..|++|++||++++|+++|++.. .+|+||||++.+|..|+..|+.|| T Consensus 538 ~~gin~i~~~---~g~G~~~wG~rT~~~--~~s~~~~i~vrR~~~~i~~si~~~~-~~~v~epn~~~~~~~i~~~i~~fL 611 (679) T protein:vir:10 538 TNGINPIVGF---AGQGYILYGDKTASQ--APTPFDRINVRRLFNLLKKSISESA-KYKLFELNDAFTRSSFRSEVGSYL 611 (679) T ss_pred hCCceEEEEe---cCCeEEEEcccccCC--CCcccceEehhhHHHHHHHHHHHHH-HHhccCCCCHHHHHHHHHHHHHHH Confidence 9999999764 455789999988632 3457999999999999999999986 589999999999999999999999 Q ss_pred HHHHhCCcccCCCcc-----ccEEecCCCEEEEEEEEEEccceeEEEEEEEEEeeeeeC Q lcl|Aclame:pro 516 DNKKRAREIQDYTPE-----EVQVVLEGDVASISMTVMPIRSLNKITVQLVYKQQILTA 569 (569) Q Consensus 516 ~~l~~~gaI~~~~~~-----d~~v~~~~d~~~v~~~v~pv~~~e~I~~ti~v~~~~~~~ 569 (569) .+||++|+|.+|... +.+.++++++++|++.++|++|||||+++|..+..-++= T Consensus 612 ~~l~~~gal~gf~v~~d~~~nt~~~i~~G~~~~~i~~~p~~pae~i~~~~~~~~~~~~~ 670 (679) T protein:vir:10 612 DTIRSLGGIYDFRVVCDESNNTPAVIDRNEFVATILIKPARSINYITLSFVATSTGADF 670 (679) T ss_pred HHHHhCCceeeeEEEEcCCCCCHHHhhCCeEEEEEEEEecCCccEEEEEEEEeecCccH Confidence 999999999997431 234567889999999999999999999999854332222 No 19 >protein:vir:7206 Length: 659 # NCBI annotation: gp18 tail sheath protein # Family: family:all:661 # MgeID: mge:142 # MgeName: T4 # Cross-refs: genbank:acc:NP_049780;genbank:gi:9632592;genbank:GeneID:1258597 Probab=100.00 E-value=3.2e-70 Score=401.57 Aligned_cols=539 Identities=13% Similarity=0.097 Sum_probs=307.7 Q ss_pred cceecCceEEEEEcCCCccccCCCCceEEEEeccCCCCCceeEEEcChHHHHHHhcCcchHHHHHHHhhhhhhhccCCce Q lcl|Aclame:pro 9 KKVSRPHTEITVDTSGIGGSSSSSDKTLMLVGSAKGGKPDTVYRFRNYQQAKQVLRSGDLLDAIELAWNASDVNTASAGD 88 (569) Q Consensus 9 ~~~~~PGvyi~~~~~~~~~~~~~~~~~~~~~g~a~~G~~~~~~~i~~~~~~~~~fg~g~l~~~~~~~~~~~~~~~~g~~~ 88 (569) =+|++|||||||.+++.+++++ ++++++|+|.++|||+++|++|+||.||++.||+.. +.-.+.|....+|+|||++ T Consensus 1 ~~~~~PgVyvee~~~~~~~~~~-~ts~~~fvG~~~~Gp~~~p~~i~s~~~~~~~fG~~~--~~~~~~~~~~~~f~ngg~~ 77 (659) T protein:vir:72 1 MTLLSPGIELKETTVQSTVVNN-STGTAALAGKFQWGPAFQIKQVTNEVDLVNTFGQPT--AETADYFMSAMNFLQYGND 77 (659) T ss_pred CceecCceEEEEecCCcccccC-CCcceEEEeecCCCCCcccEEecCHHHHHHHcCCcC--CCCchhHHHHHHHHhCCce Confidence 7999999999999999977755 999999999999999999999999999999999632 2223344445556899999 Q ss_pred EEEEEcCCCc---cceeeccce-------------------EEEEecCCcccceeEEEEecCCCCcceEEEEEecCCcee Q lcl|Aclame:pro 89 ILAVRVEDAK---NATLTKGGL-------------------TFASTIYGVDANEIQVALEDNNLTHTKRLTVAFSKDGYK 146 (569) Q Consensus 89 ~~~~rv~~~~---~a~~~~~~l-------------------~~~a~~~G~~gn~i~v~~~~~~~~~~~~~~~~~~~~~~~ 146 (569) ||++|+.++. .+++...++ ++.++.+|.||+...+... +.. ....+....... T Consensus 78 ~~vvRv~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~v~~~~~~-~~~----~~~~v~t~~~~a 152 (659) T protein:vir:72 78 LRVVRAVDRDTAKNSSPIAGNIDYTISTPGSNYAVGDKITVKYVSDDIETEGKITEVDAD-GKI----KKINIPTGKNYA 152 (659) T ss_pred EEEEEccCCcccccccccccccceeecccccccccceeeeeeeccccccccceEEEeecc-ccc----eeeeeccccccc Confidence 9999984322 232222222 2333455555554333211 100 000000000000 Q ss_pred e-----ecc-cc-cceeEEE-e-cCcccceeEEEEecCccceeeeeeec--c--ccccccce-------eeeeccccccc Q lcl|Aclame:pro 147 K-----VFD-NL-GKIFSIQ-Y-KGSEAQANFTIAQDSISKKATTLTLN--V--GSEPESTT-------EVMKYELGQGV 206 (569) Q Consensus 147 ~-----~~~-~~-~~~~~v~-~-~G~~a~a~~~v~~~~~s~~~~~lt~~--~--~~~~~~~~-------~v~~~~l~~~~ 206 (569) . .+. .. .....+. . .+.+....+.....+........... . ....+..+ ....+....+. T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~v~~~~~~~~~~v~~~~~a~~~~~~~~~v~~~~~~~~~a~~~gt~g~ 232 (659) T protein:vir:72 153 KAKEVGEYPTLGSNWTAEISSSSSGLAAVITLGKIITDSGILLAEIENAEAAMTAVDFQANLKKYGIPGVVALYPGELGD 232 (659) T ss_pred cccccccccccccceeeEEeeccccccceEEEEEeecCcceeeeeccccchhhhcccccccccccccceeeecccccccc Confidence 0 000 00 0000000 0 00000101111111100000000000 0 00000000 00000000000 Q ss_pred ---cc---------eehhhhh------hcccccceeEEecccCCcc--eecccccchhh-----ccccccceeehhhhhh Q lcl|Aclame:pro 207 ---YS---------ETNVLVS------AINSLPDWEAKFFPIGDKN--LPTDALEAVTK-----VDVKTEAVFVGALAGD 261 (569) Q Consensus 207 ---~~---------~~~~~~~------~i~~~~~~~~~~~~~~~~~--~~~~~~d~~~~-----~~~~~~~~~~~~~~~~ 261 (569) .. .....+. ...........+.+..... +.......... ................ T Consensus 233 ~~tv~i~~~~~~~~~~~~~v~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (659) T protein:vir:72 233 KIEIEIVSKADYAKGASALLPIYPGGGTRASTAKAVFGYGPQTDSQYAIIVRRNDAIVQSVVLSTKRGEKDIYDSNIYID 312 (659) T ss_pred ceeEEEccccccccceeeeeecccccccccccceeeeeeecccccccceeeecccceeeeeeeeeccccccccchhhhhh Confidence 00 0000000 0000000000010000000 00000000000 0000000000001111 Q ss_pred hhhhhccCceEEEEeccCccccccceeeeecCCCCCc---hhHHHHHHHHHHhc---CccEEEecC-------CCHHHHH Q lcl|Aclame:pro 262 IAKQLEYNDYVTVAVDATKPVEDFELTNLTGGSDGTA---PESWANKFPLLANE---GGYYLVPLT-------DKQAVHS 328 (569) Q Consensus 262 ~~~~~~~~~~v~~~~~~~~~~a~~~~~~LtGG~dg~~---~~~~~~~l~~le~~---~~~~i~~~~-------~d~~v~~ 328 (569) .........|+.... ...+........|+||.++.. ..++..++++|+.. +.++++++. ...++++ T Consensus 313 ~~~~~~~~~~v~~~~-~~~~~~~~~~~~l~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~p~~~~~~~~~~~~v~~ 391 (659) T protein:vir:72 313 DFFAKGGSEYIFATA-QNWPEGFSGILTLSGGLSSNAEVTAGDLMEAWDFFADRESVDVQLFIAGSCAGESLETASTVQK 391 (659) T ss_pred hhhhcCCceEEEEEe-cccCCcccccccccccccccccccchhHHHHHHHhhhccccceeEEEecCCCCcchhhhHHHHH Confidence 111112344555432 223333333457899988643 34677777777544 455555442 2356888 Q ss_pred HHHHHHHHHhcCCCeEEEEEcCC--------CCCCHHHHHHHhh----------hcCCceEEEEeccceec-cCCcceee Q lcl|Aclame:pro 329 EALAFVKDRTDNGDPMRIIVGGG--------TNETVEESITRAT----------NLRDPRASLVGFSGTRK-MDDGRLLK 389 (569) Q Consensus 329 ~l~~~v~~~~~~g~~~~~vv~~~--------~~~~~~~~~~~a~----------~~n~~~v~~v~~~~~~~-~~~g~~~~ 389 (569) ++.+||+++++ ++++++.+ ...+.+++++... .|+|.++++++||+... ..++.... T Consensus 392 ~l~~~~~~~~~----~~~~~d~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~s~~~~~~~p~~~~~d~~~~~~~~ 467 (659) T protein:vir:72 392 HVVSIGDARQD----CLVLCSPPRETVVGIPVTRAVDNLVNWRTAAGSYTDNNFNISSTYAAIDGNHKYQYDKYNDVNRW 467 (659) T ss_pred HHHHHHhhhCC----EEEEEcCccccccCCCcccCHHHHHHHHhhccccccccccccceeEEEEcCceeeccccCCceEE Confidence 99999998865 88888765 3455677766554 37899999999997543 33455566 Q ss_pred echHHHHHHHHHHhhcCc----hhcCccceeec----cccccccCCHHHHHHHHhcCcEEEEEecCCcceEEEEeeceec Q lcl|Aclame:pro 390 LPGYMMASQIAGIASGLE----VGEAITFKHFN----VTSVDRVFESSQLDMLNESGVISIEFVRNRTLTAFRVVQDVTT 461 (569) Q Consensus 390 ~~~~~~aa~vAG~~A~~~----~~~s~T~~~~~----~~~~~~~~t~~e~~~l~~~Gv~~l~~~~~~~~~~~ri~~~itT 461 (569) +|++ +++||++|..+ +++||.|+.+. ..++...+++.|++.|+++|++|+++. .+.++|+|.+.|. T Consensus 468 ~p~s---g~vAGl~Ar~D~~~G~~~span~~~~~i~g~~~~~~~~~~~~~~~Ln~~gIn~i~~~---~g~G~~~wG~rT~ 541 (659) T protein:vir:72 468 VPLA---ADIAGLCARTDNVSQTWMSPAGYNRGQILNVIKLAIETRQAQRDRLYQEAINPVTGT---GGDGYVLYGDKTA 541 (659) T ss_pred echH---HHHHHHHHHhhccCCcEEccCCeeeceeeccccccccCChhHHHHHhhCCceEEEEe---cCCeEEEEccccc Confidence 6764 78888888776 67899998753 346777889999999999999999764 4457999999876 Q ss_pred cCCCCchhhhhhhHHHHHHHHHHHHHHHHHhcCCcccCChHHHHHHHHHHHHHHHHHHhCCcccCCCc-----cccEEec Q lcl|Aclame:pro 462 YNDKSDPVKNEMSVGEANDFLVSELKIELDNNFIGTKVIDTSASLIKNFIQSFLDNKKRAREIQDYTP-----EEVQVVL 536 (569) Q Consensus 462 ~~~~~d~~~~~i~v~R~~d~i~~~i~~~~~~~~iGk~nn~~~~~~v~~~i~~~L~~l~~~gaI~~~~~-----~d~~v~~ 536 (569) . ..+..|++|++||++|+|+++|++.. .+|++|||++.+|..|+..|+.||.+||++|+|++|.. .+.+.++ T Consensus 542 ~--~~~s~~~~i~vrR~~~~i~~si~~~~-~~~v~e~n~~~l~~~i~~~i~~fL~~l~~~gal~~~~V~~d~~~nt~~~i 618 (659) T protein:vir:72 542 T--SVPSPFDRINVRRLFNMLKTNIGRSS-KYRLFELNNAFTRSSFRTETAQYLQGNKALGGIYEYRVVCDTTNNTPSVI 618 (659) T ss_pred C--CCCcccceEeehhHHHHHHHHHHHHH-HHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCceeeEEEEEcCCCCCHHHh Confidence 3 23457999999999999999999986 68999999999999999999999999999999998743 1234567 Q ss_pred CCCEEEEEEEEEEccceeEEEEEEEEEeeeeeC Q lcl|Aclame:pro 537 EGDVASISMTVMPIRSLNKITVQLVYKQQILTA 569 (569) Q Consensus 537 ~~d~~~v~~~v~pv~~~e~I~~ti~v~~~~~~~ 569 (569) +.++++|++.++|++|+|||++||...-.-++- T Consensus 619 ~~G~~~~~i~~~p~~pae~I~~~~~~~~~~~~~ 651 (659) T protein:vir:72 619 DRNEFVATFYIQPARSINYITLNFVATATGADF 651 (659) T ss_pred hCCeEEEEEEEEecCCccEEEEEEEEeecCcch Confidence 889999999999999999999999843333332 No 20 >protein:vir:103456 Length: 659 # NCBI annotation: tail sheath monomer # Family: family:all:661 # MgeID: mge:1542 # MgeName: RB32 # Cross-refs: genbank:acc:YP_803108;genbank:gi:116326388;genbank:GeneID:4405485 Probab=100.00 E-value=4.4e-70 Score=400.84 Aligned_cols=542 Identities=13% Similarity=0.077 Sum_probs=310.4 Q ss_pred cceecCceEEEEEcCCCccccCCCCceEEEEeccCCCCCceeEEEcChHHHHHHhcCcchHHHHHHHhhhhhhhccCCce Q lcl|Aclame:pro 9 KKVSRPHTEITVDTSGIGGSSSSSDKTLMLVGSAKGGKPDTVYRFRNYQQAKQVLRSGDLLDAIELAWNASDVNTASAGD 88 (569) Q Consensus 9 ~~~~~PGvyi~~~~~~~~~~~~~~~~~~~~~g~a~~G~~~~~~~i~~~~~~~~~fg~g~l~~~~~~~~~~~~~~~~g~~~ 88 (569) =+|++|||||||.+++.+++++ ++++++|+|.++|||+++|++|+||.||++.||+- .+.-.+.|....+|+|||++ T Consensus 1 ~~~~~PgVyv~e~~~~~~~~~~-~ts~~~fvG~~~~Gp~~~p~~i~s~~d~~~~fG~~--~~~~~~~~~v~~~f~ngg~~ 77 (659) T protein:vir:10 1 MTLLSPGIELKETTVQSTVVNN-STGTAALAGKFQWGPAFQIKQVTNEVDLVNTFGQP--TAETADYFMSAMNFLQYGND 77 (659) T ss_pred CceecCceEEEEecCCceeccc-CccceEEEecccCCCCCccEEecCHHHHHHHcCCc--CCCcchhHHHHHHHhhCCCe Confidence 7899999999999999988866 79999999999999999999999999999999973 22233445555566899999 Q ss_pred EEEEEcCCCcc---ceeeccceEEEEecC----------------CcccceeEEEEecCCCCcceEEEEEecCCceeeec Q lcl|Aclame:pro 89 ILAVRVEDAKN---ATLTKGGLTFASTIY----------------GVDANEIQVALEDNNLTHTKRLTVAFSKDGYKKVF 149 (569) Q Consensus 89 ~~~~rv~~~~~---a~~~~~~l~~~a~~~----------------G~~gn~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (569) ||++|+.++.. +....+++.+++..+ +.+||.+++.+.+...... .+.+ .......... T Consensus 78 ~~vvRv~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~v~~vd~~~~~~-~~~i-~~~~~~~~~~ 155 (659) T protein:vir:10 78 LRVVRAVDRDTAKNSSPIAGNIEYTISTPGSNYAVGDKITVKYVSDAIETEGKITEVDTDGKIK-KINI-PTAKIIAKAK 155 (659) T ss_pred EEEEEccCcccccccccccccceeeEeecccccccccceeeeecCCCccccceeeEEecccccc-eeee-cccccccccc Confidence 99999854332 222223333333333 3445555554432211000 0000 0000000000 Q ss_pred cc-ccc------eeEEEe--cCcccceeEEEEecCccceeeeeeec--cccccccceeeeeccc--cccc---------- Q lcl|Aclame:pro 150 DN-LGK------IFSIQY--KGSEAQANFTIAQDSISKKATTLTLN--VGSEPESTTEVMKYEL--GQGV---------- 206 (569) Q Consensus 150 ~~-~~~------~~~v~~--~G~~a~a~~~v~~~~~s~~~~~lt~~--~~~~~~~~~~v~~~~l--~~~~---------- 206 (569) .. ... ...+.- .+........................ ...+......+..+.. .... T Consensus 156 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~a~t~~~~~~~~~~~~~~~v~a~~~G~~g~~~t 235 (659) T protein:vir:10 156 EVGEYPTLGSNWTAEISSSSSGLAAVITLGKIITDSGILLAEIENAEAAMTAVDFQANLKKYGIPGVVALYPGELGDKIE 235 (659) T ss_pred cccccceeeeeeeeeeeeeccccceeeEEeeeecCCceeEEeeccccccccccccccceeecccccccccccceecccce Confidence 00 000 000100 00000000000000000000000000 0000000000000000 0000 Q ss_pred c-----ceehhhhhhcc-------ccc---ceeEEecccCCcc--eeccccc-chhhccc----cccceeehhhhhhhhh Q lcl|Aclame:pro 207 Y-----SETNVLVSAIN-------SLP---DWEAKFFPIGDKN--LPTDALE-AVTKVDV----KTEAVFVGALAGDIAK 264 (569) Q Consensus 207 ~-----~~~~~~~~~i~-------~~~---~~~~~~~~~~~~~--~~~~~~d-~~~~~~~----~~~~~~~~~~~~~~~~ 264 (569) . ........... ..+ .....+.+..+.. +...... ....... ................ T Consensus 236 v~~~~~a~~~~~~~v~v~~~~~~~~~a~~~t~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (659) T protein:vir:10 236 IEIVSKADYAKGASALLPIYPGGGTRASTAKAVFGYGPQTDSQYAIIVRRNDAIVQSVVLSTKRGEKDIYDSNIYIDDFF 315 (659) T ss_pred EEEechhhccccceeeeeeeeecccccccceeeeeeccccccchhhccccccceeeeeeeeccccccccccchhhhhhhh Confidence 0 00000000000 000 0000000000000 0000000 0000000 0000000000000000 Q ss_pred hhccCceEEEEeccCccccccceeeeecCCCCCc---hhHHHHHHHHHHhc---CccEEEecC-------CCHHHHHHHH Q lcl|Aclame:pro 265 QLEYNDYVTVAVDATKPVEDFELTNLTGGSDGTA---PESWANKFPLLANE---GGYYLVPLT-------DKQAVHSEAL 331 (569) Q Consensus 265 ~~~~~~~v~~~~~~~~~~a~~~~~~LtGG~dg~~---~~~~~~~l~~le~~---~~~~i~~~~-------~d~~v~~~l~ 331 (569) ......|+.+.. ...+........|+||.|+.. ..++..++++|+.. +.++++++. ...+++.++. T Consensus 316 ~~~~~~~v~~~~-~~~~~~~~~~~~l~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~p~~~~~~~~~~~~v~~al~ 394 (659) T protein:vir:10 316 AKGGSEYIFATA-QNWPEGFSGILTLSGGLSSNAEVTAGDLMEAWDFFADRESVDVQLFIAGSCAGESLETASTVQKHVV 394 (659) T ss_pred ccCcccEEEEee-cccCCCccceeeecccccccccccchhHHHHHHHhhhccccceeEEEecCCCCcchhhhHHHHHHHH Confidence 112234444332 222333333457999988643 34677777777544 455555442 2357889999 Q ss_pred HHHHHHhcCCCeEEEEEcCCC--------CCCHHHHHHHhhh----------cCCceEEEEeccceec-cCCcceeeech Q lcl|Aclame:pro 332 AFVKDRTDNGDPMRIIVGGGT--------NETVEESITRATN----------LRDPRASLVGFSGTRK-MDDGRLLKLPG 392 (569) Q Consensus 332 ~~v~~~~~~g~~~~~vv~~~~--------~~~~~~~~~~a~~----------~n~~~v~~v~~~~~~~-~~~g~~~~~~~ 392 (569) +||+++++ ++++++.+. ..+.+++++.... |+|.++++++||+... ..++....+|+ T Consensus 395 ~~~~~~~~----~~~~~d~p~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~s~~~~l~~p~~~~~d~~~~~~~~~p~ 470 (659) T protein:vir:10 395 SIGDARQD----CLVLCSPPRETVVGIPVTRAVDNLVNWRTAAGSYTDNNFNISSTYAAIDGNYKYQYDKYNDVNRWVPL 470 (659) T ss_pred HHHHhhCC----eEEEEcCccccccCCCcccCHHHHHHHHHhcccccccccccCcceEEEEeCcEEEecccCCceEEech Confidence 99998864 888887653 3566777776553 8899999999998643 34455566666 Q ss_pred HHHHHHHHHHhhcCc----hhcCccceeec----cccccccCCHHHHHHHHhcCcEEEEEecCCcceEEEEeeceeccCC Q lcl|Aclame:pro 393 YMMASQIAGIASGLE----VGEAITFKHFN----VTSVDRVFESSQLDMLNESGVISIEFVRNRTLTAFRVVQDVTTYND 464 (569) Q Consensus 393 ~~~aa~vAG~~A~~~----~~~s~T~~~~~----~~~~~~~~t~~e~~~l~~~Gv~~l~~~~~~~~~~~ri~~~itT~~~ 464 (569) + +++||++|..+ +++||.|+.+. ..++...+++.|++.|+++|++|+++. .+.++|+|.+.|..+ T Consensus 471 s---g~~AGl~Ar~D~~~g~~~span~~~~~i~g~~~~~~~~~~~~~~~Ln~~gIn~i~~~---~~~G~~~wG~rT~~~- 543 (659) T protein:vir:10 471 A---ADIAGLCARTDNVSQTWMSPAGYNRGQILNVIKLAIETRQAQRDRLYQEAINPVTGT---GGDGYVLYGDKTATS- 543 (659) T ss_pred H---HHHHHHHHHHhccCCceEccCCceeeeeeccccceecCCHhHHHHHhhCCeeEEEEe---CCCeEEEEcccccCC- Confidence 4 78888888774 67799998653 446777899999999999999999754 445799999988632 Q ss_pred CCchhhhhhhHHHHHHHHHHHHHHHHHhcCCcccCChHHHHHHHHHHHHHHHHHHhCCcccCCCc-----cccEEecCCC Q lcl|Aclame:pro 465 KSDPVKNEMSVGEANDFLVSELKIELDNNFIGTKVIDTSASLIKNFIQSFLDNKKRAREIQDYTP-----EEVQVVLEGD 539 (569) Q Consensus 465 ~~d~~~~~i~v~R~~d~i~~~i~~~~~~~~iGk~nn~~~~~~v~~~i~~~L~~l~~~gaI~~~~~-----~d~~v~~~~d 539 (569) .+..|++|++||++|+|+++|++.. .||++|||++.+|..|+..|+.||..||++|+|++|.. .+.+.+++++ T Consensus 544 -~~s~~~~i~vrR~~~~i~~si~~~~-~~~v~e~n~~~l~~~i~~~i~~fL~~l~~~gal~~~~V~~d~~~nt~~~i~~G 621 (659) T protein:vir:10 544 -VPSPFDRINVRRLFNMLKTNIGRSS-KYRLFELNNAFTRSSFRTETAQYLQGIKALGGIYEYRVVCDTTNNTPSVIDRN 621 (659) T ss_pred -CCcccceEehhhHHHHHHHHHHHHH-HHhccCCCCHHHHHHHHHHHHHHHHHHHhcCceeeEEEEEcCCCCCHHHhhCC Confidence 3457999999999999999999986 68999999999999999999999999999999998743 1234567789 Q ss_pred EEEEEEEEEEccceeEEEEEEEEEeeeeeC Q lcl|Aclame:pro 540 VASISMTVMPIRSLNKITVQLVYKQQILTA 569 (569) Q Consensus 540 ~~~v~~~v~pv~~~e~I~~ti~v~~~~~~~ 569 (569) +++|++.++|++|+|||+++|...-.-++- T Consensus 622 ~~~~~i~~~p~~pae~i~~~~~~~~~~~~~ 651 (659) T protein:vir:10 622 EFVATFYIQPARSINYITLNFVATATGADF 651 (659) T ss_pred eEEEEEEEEecCCcceEEEEEEEEecCcch Confidence 999999999999999999999855333332 No 21 >protein:vir:100539 Length: 663 # NCBI annotation: gp18 tail sheath monomer # Family: family:all:661 # MgeID: mge:1488 # MgeName: 25 # Cross-refs: genbank:acc:YP_656380;genbank:gi:109290131;genbank:GeneID:4156517 Probab=100.00 E-value=2.8e-70 Score=401.93 Aligned_cols=544 Identities=12% Similarity=0.071 Sum_probs=312.9 Q ss_pred cceecCceEEEEEcCCCccccCCCCceEEEEeccCCCCCceeEEEcChHHHHHHhcCcchHHHHHHHhhhhhhhccCCce Q lcl|Aclame:pro 9 KKVSRPHTEITVDTSGIGGSSSSSDKTLMLVGSAKGGKPDTVYRFRNYQQAKQVLRSGDLLDAIELAWNASDVNTASAGD 88 (569) Q Consensus 9 ~~~~~PGvyi~~~~~~~~~~~~~~~~~~~~~g~a~~G~~~~~~~i~~~~~~~~~fg~g~l~~~~~~~~~~~~~~~~g~~~ 88 (569) =+|++|||||||.+ +.+++++++|++++|+|.++|||+++|++|+||.||++.||+- .+.-.+.|....+|+|||++ T Consensus 1 ~~~~~Pgvyv~e~~-~~~~~~~v~t~~~~fvG~~~~gp~~~p~~i~s~~~~~~~fG~~--~~~~~~~~~v~~~f~ngg~~ 77 (663) T protein:vir:10 1 MALLSPGIEMKETS-INSTVVRSATGRAALVGKFAWGPAYEIRQVTNEVELVDMFGSP--DNVTAPYFMSAMNFLQYGND 77 (663) T ss_pred CccccCceEEEEec-CcccccccccccceeeeccccCCCCcCEEecCHHHHHHHcCCc--ccccchHHHHHHHHHhCCCe Confidence 78999999999996 6788999999999999999999999999999999999999973 23334455666677999999 Q ss_pred EEEEEcCCCcc---ceeeccc--eE-EEEecCCcccceeEEEEecCCCCcceEEEEEecCCceeeeccccccee------ Q lcl|Aclame:pro 89 ILAVRVEDAKN---ATLTKGG--LT-FASTIYGVDANEIQVALEDNNLTHTKRLTVAFSKDGYKKVFDNLGKIF------ 156 (569) Q Consensus 89 ~~~~rv~~~~~---a~~~~~~--l~-~~a~~~G~~gn~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 156 (569) ||++|+.++.. +++..+. ++ ..+...|.|||.+++....-.......+............+...+..+ T Consensus 78 ~~vvRv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~~~~~g~~~~~~~~~a~~~~~a~~~ 157 (663) T protein:vir:10 78 LRLVRVIDMEQAKNASPLFNQIEVTITTEGQGYTVGDTVSIKHNTTTVTEEGKVTKVDADGKIKALFVPSSAVIAKAKQL 157 (663) T ss_pred EEEEecCCcccccccccccccceeeEeecccCccccceeeecccccccccCcceeeeccCCceeEEEecccccccccccc Confidence 99999965433 3332222 22 234456789999887643222222222222222222111111111000 Q ss_pred ----------EEEecCcc--cceeEEEE--ecCccceeeeeeeccccccccceee-----------eeccccccccceeh Q lcl|Aclame:pro 157 ----------SIQYKGSE--AQANFTIA--QDSISKKATTLTLNVGSEPESTTEV-----------MKYELGQGVYSETN 211 (569) Q Consensus 157 ----------~v~~~G~~--a~a~~~v~--~~~~s~~~~~lt~~~~~~~~~~~~v-----------~~~~l~~~~~~~~~ 211 (569) .....+.. ......+. ..+...................... ..+....+....+. T Consensus 158 ~~~~~~~~a~~~~v~~~~~~~~~a~av~~i~~dg~vt~~~~~~a~~~~~~~~~~~~~~~~~~~~~~a~~~g~~G~~i~v~ 237 (663) T protein:vir:10 158 GTYPVLGDNWRAEVSGASGGSAATLTLGGIVVDSGVTFGNSEEAPDVMTSTKVLANFAKYGMPLISAVYPGEIGSTVEVE 237 (663) T ss_pred ccccccccceeeEEeeccccccccceeEeeecCCceeEEeeeccccccccceeeeeccccccceeeeecccccCcceeEe Confidence 00000000 00000000 0000000000000000000000000 00000000000000 Q ss_pred hhhhhcccccceeE-EecccCCccee-----------cccccchhhccccccce-eeh---------hhhhhhhhhh--c Q lcl|Aclame:pro 212 VLVSAINSLPDWEA-KFFPIGDKNLP-----------TDALEAVTKVDVKTEAV-FVG---------ALAGDIAKQL--E 267 (569) Q Consensus 212 ~~~~~i~~~~~~~~-~~~~~~~~~~~-----------~~~~d~~~~~~~~~~~~-~~~---------~~~~~~~~~~--~ 267 (569) ............. .....+..... .+..+.+....-...+. .+. .........+ . T Consensus 238 -~~~~~~~~~~~~~~v~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~e~~~ls~~~~~~~~~~~~~~~~~~~~~~ 316 (663) T protein:vir:10 238 -VISKTAFQSGAAQPIYPFGGTRASNARSVIQYGPMTDDQFAIIVRRDGIVVESTVLSTRRGDRDVYGNNIFMDDYFRNG 316 (663) T ss_pred -ecccccccccceeeecccCcccccccccccccccccchhhcccccCCCcccceeeeeccccccccchhhhhhhhhhcCc Confidence 0000000000000 00000000000 00000000000000000 000 0000011111 1 Q ss_pred cCceEEEEeccCccccccceeeeecCCCCCc---hhHHHHHHHHHHh---cCccEEEecC--C-----CHHHHHHHHHHH Q lcl|Aclame:pro 268 YNDYVTVAVDATKPVEDFELTNLTGGSDGTA---PESWANKFPLLAN---EGGYYLVPLT--D-----KQAVHSEALAFV 334 (569) Q Consensus 268 ~~~~v~~~~~~~~~~a~~~~~~LtGG~dg~~---~~~~~~~l~~le~---~~~~~i~~~~--~-----d~~v~~~l~~~v 334 (569) .+.++.... .+.+........|+||.++.. ..++..+++.|.+ .+.+.++++. . ..+++.++.+|| T Consensus 317 ~s~~v~~~~-~~~~~~~~~~~~l~gg~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~i~~~~~~~~~~~~~~v~~~l~~~~ 395 (663) T protein:vir:10 317 SSNFIYASS-VNWPAGFTGIIQLGGGASANNAVGSDELIAGWDLFADREALHVNLMIAGACKSDGVAVASTVQKHVVALA 395 (663) T ss_pred ccceeEeec-cccCcccceeEEecccccCcccchhhhhhhHHhhhccccccCceEEEeecCCCCchhhHHHHHHHHHHHH Confidence 233443321 122222223357899998753 3467766666654 3444444321 1 246777888888 Q ss_pred HHHhcCCCeEEEEEcCCCCCC--------HHHHHH-------------HhhhcCCceEEEEeccceec-cCCcceeeech Q lcl|Aclame:pro 335 KDRTDNGDPMRIIVGGGTNET--------VEESIT-------------RATNLRDPRASLVGFSGTRK-MDDGRLLKLPG 392 (569) Q Consensus 335 ~~~~~~g~~~~~vv~~~~~~~--------~~~~~~-------------~a~~~n~~~v~~v~~~~~~~-~~~g~~~~~~~ 392 (569) ++++ .|+++++.+...+ .+++.. ....|+|++.++++||.... ..++..+.+|+ T Consensus 396 ~~~~----~~~ai~d~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~p~~~~~d~~~~~~~~~p~ 471 (663) T protein:vir:10 396 DDRQ----DCVAFVNPPSELLVGVPTTQAVKNIVEWRNGVTTGGEVVDNNMNISSTYAFISGNYKYQYDKYNDINRWVPL 471 (663) T ss_pred HhhC----CEEEEEecCcccccccchhhhHHHHHHHhhhccccchhhhhhcccCcceEEEEecceeEecccCCceEEech Confidence 8765 4999998875432 223332 33468999999999987543 33455566675 Q ss_pred HHHHHHHHHHhhcCc----hhcCccceeec----cccccccCCHHHHHHHHhcCcEEEEEecCCcceEEEEeeceeccCC Q lcl|Aclame:pro 393 YMMASQIAGIASGLE----VGEAITFKHFN----VTSVDRVFESSQLDMLNESGVISIEFVRNRTLTAFRVVQDVTTYND 464 (569) Q Consensus 393 ~~~aa~vAG~~A~~~----~~~s~T~~~~~----~~~~~~~~t~~e~~~l~~~Gv~~l~~~~~~~~~~~ri~~~itT~~~ 464 (569) + +++||++|..+ +++||.|+.+. ..++...+++.|++.|+++|++|++...+ +.++|+|.+.|.. T Consensus 472 s---~~vAGl~Ar~D~~~g~~~span~~~~~i~g~~~~~~~~~~~~~~~Ln~~gin~i~~~~~--~~G~~~wG~rT~s-- 544 (663) T protein:vir:10 472 S---ADIAGLCAYTDQVGHPWMSPAGYRRGQLRNTIKLAIEPKQSLRDTMYQVSINPVTGFAG--GDGFVLFGDKMAT-- 544 (663) T ss_pred H---HHHHHHHHHhhccCCcEEccCCeeecceeccccceeecCchhHHHHHhCCCcEEEEeeC--CCcEEEEcccccC-- Confidence 4 78888888776 88899998753 35677789999999999999999976432 3578999998862 Q ss_pred CCchhhhhhhHHHHHHHHHHHHHHHHHhcCCcccCChHHHHHHHHHHHHHHHHHHhCCcccCCCc-----cccEEecCCC Q lcl|Aclame:pro 465 KSDPVKNEMSVGEANDFLVSELKIELDNNFIGTKVIDTSASLIKNFIQSFLDNKKRAREIQDYTP-----EEVQVVLEGD 539 (569) Q Consensus 465 ~~d~~~~~i~v~R~~d~i~~~i~~~~~~~~iGk~nn~~~~~~v~~~i~~~L~~l~~~gaI~~~~~-----~d~~v~~~~d 539 (569) .++..|++|++||++|+|+++|++.+ .+|+||||++.+|..|+..|+.||.+||++|+|.+|.. .+.+.+++++ T Consensus 545 ~~~s~~~~i~vrR~~~~i~~si~~~~-~~~v~epn~~~l~~~i~~~i~~~L~~l~~~gal~gf~V~~d~~~nt~~~i~~G 623 (663) T protein:vir:10 545 QVPSPFDRINVRRLFNMLKKNIGDTS-KYELFENNDAFTRQSFRMEVSQYLDNIRSLGGVYDFRVVCDTTNNTPQVIDSN 623 (663) T ss_pred CCCcccceEehhhHHHHHHHHHHHHH-HHhccCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeEEEEcCCCCCHHHhhCC Confidence 33457999999999999999999986 58999999999999999999999999999999999743 2234567789 Q ss_pred EEEEEEEEEEccceeEEEEEEEEEeeeeeC Q lcl|Aclame:pro 540 VASISMTVMPIRSLNKITVQLVYKQQILTA 569 (569) Q Consensus 540 ~~~v~~~v~pv~~~e~I~~ti~v~~~~~~~ 569 (569) +++|++.++|++|+|||+++|.....-++- T Consensus 624 ~~~~~i~~~p~~pae~I~~~~~~~~~~~~f 653 (663) T protein:vir:10 624 EFVATIYIKAPRSINYITLNFVATSTGANF 653 (663) T ss_pred eEEEEEEEEecCCcceEEEEEEEEecCccH Confidence 999999999999999999999855333322 No 22 >protein:vir:104858 Length: 729 # NCBI annotation: T4-like tail sheath protein # Family: family:all:661 # MgeID: mge:1630 # MgeName: P-SSM2 # Cross-refs: genbank:acc:YP_214361;genbank:gi:61806001;genbank:GeneID:3294378 Probab=100.00 E-value=1.8e-70 Score=402.94 Aligned_cols=549 Identities=14% Similarity=0.128 Sum_probs=313.6 Q ss_pred cCcceecCceEEEEEcCCCccccCCCCceEEEEeccCCCCCceeEEEcChHHHHHHhcCcchHHHHHHHhhhhhhhccCC Q lcl|Aclame:pro 7 PRKKVSRPHTEITVDTSGIGGSSSSSDKTLMLVGSAKGGKPDTVYRFRNYQQAKQVLRSGDLLDAIELAWNASDVNTASA 86 (569) Q Consensus 7 ~~~~~~~PGvyi~~~~~~~~~~~~~~~~~~~~~g~a~~G~~~~~~~i~~~~~~~~~fg~g~l~~~~~~~~~~~~~~~~g~ 86 (569) ..-+|++|||||||.+++.+++++++|++++|+|.++|||+++|++|+||.||++.||+-...+...+.|....+|+||| T Consensus 1 m~~~~~~PgVyv~e~~~~~~~i~~v~ts~~~fvG~~~~Gp~~~p~~i~s~~~~~~~fG~~~~~~~~~~~~~~~~~f~ngg 80 (729) T protein:vir:10 1 MPLNLASPGIVVREVDLTIGRVDPTSGSIGALVAPFAKGPVNDPQLIESEEDLLQTFGQPYSTDKHYEYWMVASSYLAYG 80 (729) T ss_pred CCccccCCceEEEEecCCCcccccccccceeEEeccccCCCccCeEcCCHHHHHHHcCccccCCcchhHHHHHHHHHhCC Confidence 33479999999999999999999999999999999999999999999999999999997322222333444455668999 Q ss_pred ceEEEEEcCCCcc--cee---------------------------------eccceEEEEecCCcccceeEEEEecCCCC Q lcl|Aclame:pro 87 GDILAVRVEDAKN--ATL---------------------------------TKGGLTFASTIYGVDANEIQVALEDNNLT 131 (569) Q Consensus 87 ~~~~~~rv~~~~~--a~~---------------------------------~~~~l~~~a~~~G~~gn~i~v~~~~~~~~ 131 (569) ++|||+|+.++.. ++. ....+++.+++||.|||.+++.+.+...+ T Consensus 81 ~~~~vvRv~~~~~~~a~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~G~~gn~~~v~v~~~~~~ 160 (729) T protein:vir:10 81 GTMQVVRADDYNTQTGVGLKNAFVTGGVGVGATMLRITSNTHYNQLGYDENTISGVSVAAKNPGTWANGIKVAIIDGKAD 160 (729) T ss_pred ceEEEEecCcccccccccccccccccccccccccccccccccccccccccCCCcceEEEEeccCccccceeeEEecccCc Confidence 9999999854221 110 01247899999999999999998776443 Q ss_pred cceEEEEEecCCc---e----eeecccccceeEEEe--c---CcccceeEEEEecCc-cceeeeeeecccc------ccc Q lcl|Aclame:pro 132 HTKRLTVAFSKDG---Y----KKVFDNLGKIFSIQY--K---GSEAQANFTIAQDSI-SKKATTLTLNVGS------EPE 192 (569) Q Consensus 132 ~~~~~~~~~~~~~---~----~~~~~~~~~~~~v~~--~---G~~a~a~~~v~~~~~-s~~~~~lt~~~~~------~~~ 192 (569) ....+........ . ............++. . .........+..... ............. ... T Consensus 161 ~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~s~~~~~~~~~~~~~~~~~~~~~~~~ 240 (729) T protein:vir:10 161 QILTVASGNTTAVGSAVTQSISKTIGTATGTTTIDGVLKGIVTGSTDTTLEVKVISHISAAGVETAVEYQQNGTYTFDNS 240 (729) T ss_pred ceeeeeccccccceeeeeeeccccccccccceeeeeeecccccccccccccceecccccccccceeccccccceeeeccc Confidence 3322211100000 0 000000000000000 0 000000000000000 0000000000000 000 Q ss_pred cceeeeecccc-ccc----------cceeh-hhhh------hcccccceeEEeccc---CCcceecccccchhhcccccc Q lcl|Aclame:pro 193 STTEVMKYELG-QGV----------YSETN-VLVS------AINSLPDWEAKFFPI---GDKNLPTDALEAVTKVDVKTE 251 (569) Q Consensus 193 ~~~~v~~~~l~-~~~----------~~~~~-~~~~------~i~~~~~~~~~~~~~---~~~~~~~~~~d~~~~~~~~~~ 251 (569) .......-... .+. ..... .... .+...|. +..+... ..........|.......... T Consensus 241 ~s~~~~a~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~-t~~~~~~~~~~~d~~~~~~~d~~~~~~~~~g 319 (729) T protein:vir:10 241 GSVNVIAAGSSGSGSAKSYTAQTDWFESQNIVLSNSTLEWDSIADAPG-TSTYVSTRGGKNDEIHVLVIDDKGTITGNSG 319 (729) T ss_pred Cccceeeeccccccccccceeeeccccccccccccccccccccccccc-cccccccccccccccceeeeccccccccCcc Confidence 00000000000 000 00000 0000 0000000 0000000 000000000000000000000 Q ss_pred c-----eeehhh-------hh--hhhhhh-ccCceEEEEec-------------------c---------Cc-cccccce Q lcl|Aclame:pro 252 A-----VFVGAL-------AG--DIAKQL-EYNDYVTVAVD-------------------A---------TK-PVEDFEL 287 (569) Q Consensus 252 ~-----~~~~~~-------~~--~~~~~~-~~~~~v~~~~~-------------------~---------~~-~~a~~~~ 287 (569) . ..+... .. .....+ ..+.|+..... . .. ....... T Consensus 320 ~vve~~~~~s~~~~~~~~~~~~~~~~~vi~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~ 399 (729) T protein:vir:10 320 TILEKHLSLSKAKDAEYSVGSSSYWRDFLATNSKYIFGGGATSGITTTGYSVSSTNTLDTDSGWDQNAEGVNFGASGVAT 399 (729) T ss_pred cceeeeeeeeeccccccccccccccceeeccccceeeecccccccccccccccccceeccccccccccccccccccceeE Confidence 0 000000 00 000000 01111111000 0 00 0001123 Q ss_pred eeeecCCCCCc-------------hhHHHHHHHHHHhcCc---cEEEec------CCCHHHHHHHHHHHHHHhcCCCeEE Q lcl|Aclame:pro 288 TNLTGGSDGTA-------------PESWANKFPLLANEGG---YYLVPL------TDKQAVHSEALAFVKDRTDNGDPMR 345 (569) Q Consensus 288 ~~LtGG~dg~~-------------~~~~~~~l~~le~~~~---~~i~~~------~~d~~v~~~l~~~v~~~~~~g~~~~ 345 (569) ..|+||.++.. ..++..++.+|++.+. +.++++ .....++.++.+||+++++ ++ T Consensus 400 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~----~~ 475 (729) T protein:vir:10 400 LTLAGGTNYGDKTDLTTSGALSSGVDDIISGYTLFENTEEIEVDFILMGAAHHPKEQSQAVAEKVTAVAEARKD----AV 475 (729) T ss_pred EEeecccccccccccccccccccchhHHHHHHHHhhcccccccceeeecCCCCCccchHHHHHHHHHHHHhcCC----eE Confidence 45777776432 1346778888876543 223222 2356788999999998854 77 Q ss_pred EEEcCCCC-----------------CCHHHHHHHhhhc-CCceEEEEeccceec-cCCcceeeechHHHHHHHHHHhhcC Q lcl|Aclame:pro 346 IIVGGGTN-----------------ETVEESITRATNL-RDPRASLVGFSGTRK-MDDGRLLKLPGYMMASQIAGIASGL 406 (569) Q Consensus 346 ~vv~~~~~-----------------~~~~~~~~~a~~~-n~~~v~~v~~~~~~~-~~~g~~~~~~~~~~aa~vAG~~A~~ 406 (569) +++..+.. ...+++......+ +++++++++||.... ...+..+.+|++ +++||++|.. T Consensus 476 a~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~d~~~~~~~~~p~s---~~~aGl~a~~ 552 (729) T protein:vir:10 476 AFISPYRQAFLNDTVSGTVTVSNIDQTTENVVGFYAPLSSSTYSVFDSGYKYMFDRFNNTFRYVPLN---GDIAGTCART 552 (729) T ss_pred EEecccccccccccccccccccccchhhHHHHHHHhhccCCceEEEEcCeeEEecccCCceEEechh---HHHHHHHHHh Confidence 77765422 2234444444444 457788889987543 334555666764 7888888877 Q ss_pred c----hhcCccceeec----cccccccCCHHHHHHHHhcCcEEEEEecCCcceEEEEeeceeccCCCCchhhhhhhHHHH Q lcl|Aclame:pro 407 E----VGEAITFKHFN----VTSVDRVFESSQLDMLNESGVISIEFVRNRTLTAFRVVQDVTTYNDKSDPVKNEMSVGEA 478 (569) Q Consensus 407 ~----~~~s~T~~~~~----~~~~~~~~t~~e~~~l~~~Gv~~l~~~~~~~~~~~ri~~~itT~~~~~d~~~~~i~v~R~ 478 (569) + +++||.|+.+. ..++...+++.|++.|+++|+++++.. .+.++|+|.+.|.. ..|+.|++|++||+ T Consensus 553 d~~~g~~~span~~~~~i~g~~~~~~~~~~~~~~~Ln~~gIn~i~~~---~~~G~~~wG~rT~~--~~d~~~~~i~vrR~ 627 (729) T protein:vir:10 553 DIEQFPWFSPAGTARGPILNSVKLVYNPGKKQRDILYSNRINPVILS---PGAGIILFGDKTGF--GKSSAFDRINVRRL 627 (729) T ss_pred hccCCcEEccCCccccceecccceeeecChhhHhhhhhCCceEEEEe---cCCeEEEEcceecC--CCCcccceeehhhh Confidence 6 67799998864 345667889999999999999999753 45689999998853 45789999999999 Q ss_pred HHHHHHHHHHHHHhcCCcccCChHHHHHHHHHHHHHHHHHHhCCcccCCCc----c-ccEEecCCCEEEEEEEEEEccce Q lcl|Aclame:pro 479 NDFLVSELKIELDNNFIGTKVIDTSASLIKNFIQSFLDNKKRAREIQDYTP----E-EVQVVLEGDVASISMTVMPIRSL 553 (569) Q Consensus 479 ~d~i~~~i~~~~~~~~iGk~nn~~~~~~v~~~i~~~L~~l~~~gaI~~~~~----~-d~~v~~~~d~~~v~~~v~pv~~~ 553 (569) +|+|+++|++.+ .+|++|||++.+|..|+..|+.||..||++|+|.+|.. + +.+-++++++++|++.++|++|| T Consensus 628 ~~~i~~si~~~~-~~~v~epn~~~~~~~i~~~i~~~L~~l~~~g~l~g~~v~~d~~~nt~~~i~~G~~~~~v~~~p~~p~ 706 (729) T protein:vir:10 628 FIYLEDAISAAA-KDQLFEFNDELTRTNFVNIVEPFLRDVQAKRGIFDFVVICDETNNTAAVIDSNEFVADIFIKPARSI 706 (729) T ss_pred HHHHHHHHHHHH-HHhhcCCCCHHHHHHHHHHHHHHHHHHHhccceeeeEEEEcCCCCCHHHhhCCeEEEEEEEEecCCc Confidence 999999999987 58999999999999999999999999999999999743 1 23456788999999999999999 Q ss_pred eEEEEEEEEEeeeeeC Q lcl|Aclame:pro 554 NKITVQLVYKQQILTA 569 (569) Q Consensus 554 e~I~~ti~v~~~~~~~ 569 (569) |||+++|....+-++= T Consensus 707 e~i~~~~~~~~~~~~~ 722 (729) T protein:vir:10 707 NFIGLTFVATRTGVAF 722 (729) T ss_pred cEEEEEEEEeecCccH Confidence 9999999877665442 No 23 >protein:vir:104477 Length: 749 # NCBI annotation: gp18 # Family: family:all:661 # MgeID: mge:1548 # MgeName: P-SSM4 # Cross-refs: genbank:acc:YP_214663;genbank:gi:61806304;genbank:GeneID:3294532 Probab=100.00 E-value=4.3e-70 Score=400.90 Aligned_cols=540 Identities=12% Similarity=0.079 Sum_probs=310.7 Q ss_pred cCcceecCceEEEEEcCCCccccCCCCceEEEEeccCCCCCceeEEEcChHHHHHHhcCcchHHHHHHHhhhhhhhccCC Q lcl|Aclame:pro 7 PRKKVSRPHTEITVDTSGIGGSSSSSDKTLMLVGSAKGGKPDTVYRFRNYQQAKQVLRSGDLLDAIELAWNASDVNTASA 86 (569) Q Consensus 7 ~~~~~~~PGvyi~~~~~~~~~~~~~~~~~~~~~g~a~~G~~~~~~~i~~~~~~~~~fg~g~l~~~~~~~~~~~~~~~~g~ 86 (569) ..-+|++|||||||.+++ +.+.++++++++|+|.++|||+++|++|+||.||++.||+- .+.-.+.|....+|+||| T Consensus 1 M~~~~~~PgVyv~e~~~~-~~~~~~~t~~~~fvG~~~~Gp~~~p~~v~s~~~~~~~fG~~--~~~~~~~~~v~~~F~ngg 77 (749) T protein:vir:10 1 MATNQSSPGVVIQERDLT-TVSTIPTANVGVIAAPFTKGPVEEVIEITSERQLAEKFGEP--NESNYEYWFSAAQFLSYG 77 (749) T ss_pred CCccccCCeeEEEEecCC-cccccccCceeEEEeccCCCCCccCEEcCCHHHHHHHcCCc--cCCcccHHHHHHHHhhcC Confidence 345799999999999987 56889999999999999999999999999999999999972 222234445555668999 Q ss_pred ceEEEEEcCCC--ccceee-------------------ccceEEEEecCCcccceeEEEEecCCCCcceEE--------- Q lcl|Aclame:pro 87 GDILAVRVEDA--KNATLT-------------------KGGLTFASTIYGVDANEIQVALEDNNLTHTKRL--------- 136 (569) Q Consensus 87 ~~~~~~rv~~~--~~a~~~-------------------~~~l~~~a~~~G~~gn~i~v~~~~~~~~~~~~~--------- 136 (569) ++||++|+... ++|+.+ ...+++.|++||.|||.|++.+.+........+ T Consensus 78 ~~~~vvRv~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~pG~~gn~l~v~v~~~~~~~~~~~~~~~~~~~~ 157 (749) T protein:vir:10 78 GLLKTIRVNSSSLKNAVDTGTAPLVKNLQDYETSIEDASNNFSWVARTPGDTGNSIGIFVTDAGADQVVVVPAPGSGNEH 157 (749) T ss_pred CeEEEEEccCccccccccccccccccccccccccccccccceEEEeccCCCcCCceEEEEEcCCCceeeeeecCCcccee Confidence 99999999532 222211 125789999999999999999976532211100 Q ss_pred --EE-------------EecCCceee--------------------------ecccccce--eEEEe-cCcccce-eEE- Q lcl|Aclame:pro 137 --TV-------------AFSKDGYKK--------------------------VFDNLGKI--FSIQY-KGSEAQA-NFT- 170 (569) Q Consensus 137 --~~-------------~~~~~~~~~--------------------------~~~~~~~~--~~v~~-~G~~a~a-~~~- 170 (569) .. ......... .....+.. +.+.- .+..... ... T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~a~~~~~~~~~~~~~~~~~~s~~~~~~~a~~~ 237 (749) T protein:vir:10 158 EFVADAAVSAASGAAGKVFKYSIILTIDDVVGTFAPGSATTITIGGSAESVNVLAYDATNKKLEIGLPSGGVTGILADNQ 237 (749) T ss_pred eEEeeecccccccccccccccceeeeeccccceeecccceeeeccCcccccccccccCCcceEEEeeecccccceeeeee Confidence 00 000000000 00000000 00000 0000000 000 Q ss_pred -E-EecCccceeeeeeec-------------------cccccccceeeeeccccccccceehhhhhhcccccc---eeEE Q lcl|Aclame:pro 171 -I-AQDSISKKATTLTLN-------------------VGSEPESTTEVMKYELGQGVYSETNVLVSAINSLPD---WEAK 226 (569) Q Consensus 171 -v-~~~~~s~~~~~lt~~-------------------~~~~~~~~~~v~~~~l~~~~~~~~~~~~~~i~~~~~---~~~~ 226 (569) + ..+............ ........++..........+...... ..+...+. +... T Consensus 238 ~v~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~~~~~~~~~g~~~~it~v~~~~~~~~~~t~~~~-~~~a~~~gt~~~~~~ 316 (749) T protein:vir:10 238 VITQGTNTAKINVTIERKLLVALNKSSIEFAASDVVQDTNSTNITITSVRDEYTEREYLPGVKW-INVAPRPGTSLYANG 316 (749) T ss_pred cccccccccccccccccchhhhhccccceeeccccccCCccceeEEEeeeccccccccccceee-ccccccccceeeeec Confidence 0 000000000000000 000000000000000000000000000 00000000 0000 Q ss_pred ecccCC------------------ccee-cccccchhhccccccceeehhhhhhhhhhh-ccCceEEEEe---------- Q lcl|Aclame:pro 227 FFPIGD------------------KNLP-TDALEAVTKVDVKTEAVFVGALAGDIAKQL-EYNDYVTVAV---------- 276 (569) Q Consensus 227 ~~~~~~------------------~~~~-~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~---------- 276 (569) ..+..+ ..+. ...+. ...+.+... .... .....+ ..+.++.... T Consensus 317 ~~g~~D~~~v~v~~~~g~~~~~~g~v~e~~~~~~--~~~~~~~~~--~~~~--~~~~~~~~~s~~v~~~~~~~~~~~~~~ 390 (749) T protein:vir:10 317 VGGHRDEMHVILVDIDGGVTGTVGALLERYIDVS--KASDAKTSV--GETN--YYAEVIKQKSEFIYWAEHESTLYAATS 390 (749) T ss_pred ccCCCCceEEEEecCCCeeeecccceeeeeeecc--ccccccccc--cccc--hhhhhhccCCCEEEEEecccccccccc Confidence 000000 0000 00000 000000000 0000 000000 0011111000 Q ss_pred ----------------------ccCcc-----------ccccceeeeecCCCCCc--------hhHHHHHHHHHHhc--- Q lcl|Aclame:pro 277 ----------------------DATKP-----------VEDFELTNLTGGSDGTA--------PESWANKFPLLANE--- 312 (569) Q Consensus 277 ----------------------~~~~~-----------~a~~~~~~LtGG~dg~~--------~~~~~~~l~~le~~--- 312 (569) .++.. ........+.||.|++. ..++..++++|... T Consensus 391 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gg~d~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 470 (749) T protein:vir:10 391 SASDGLFGQTAANRQFNLFRSAAGSVDYPAGVTTLGSKNNATYYYRLSGGVNYTVSAGQYTITNTDIGSAYELIGDPESQ 470 (749) T ss_pred cccccccccccccceeeccccccccceeccccccccccCCcEEEEEccCCcccccccccccccchhHHHHHHHhhhhhhc Confidence 00000 01111235677777643 24677777777544 Q ss_pred CccEEEecC------CCHHHHHHHHHHHHHHhcCCCeEEEEEcCCCCCC---------HHHHHH-HhhhcCCceEEEEec Q lcl|Aclame:pro 313 GGYYLVPLT------DKQAVHSEALAFVKDRTDNGDPMRIIVGGGTNET---------VEESIT-RATNLRDPRASLVGF 376 (569) Q Consensus 313 ~~~~i~~~~------~d~~v~~~l~~~v~~~~~~g~~~~~vv~~~~~~~---------~~~~~~-~a~~~n~~~v~~v~~ 376 (569) .++.++++. ...+++.++.+||+++++ ++++++.+.... ..++.. +...++++++++++| T Consensus 471 ~~~~li~~~~~~~~~~~~~v~~al~~~~~~~~~----~~~~~d~p~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~p 546 (749) T protein:vir:10 471 IVDFIISGPSGTSDANALAKITSLVNIAEERRD----CMVFVSPRRGNVIGISNTTTITTNIVDFFKKLPSSSYMVFDSG 546 (749) T ss_pred ccceEEEecCCCCcchhHHHHHHHHHHHhhcCC----EEEEEcCCCCcccccccchhhhhHHHHHHhhccCceeEEEEcc Confidence 344443321 224688899999988864 888888764322 122222 344567889999999 Q ss_pred cceec-cCCcceeeechHHHHHHHHHHhhcCc----hhcCccceee----ccccccccCCHHHHHHHHhcCcEEEEEecC Q lcl|Aclame:pro 377 SGTRK-MDDGRLLKLPGYMMASQIAGIASGLE----VGEAITFKHF----NVTSVDRVFESSQLDMLNESGVISIEFVRN 447 (569) Q Consensus 377 ~~~~~-~~~g~~~~~~~~~~aa~vAG~~A~~~----~~~s~T~~~~----~~~~~~~~~t~~e~~~l~~~Gv~~l~~~~~ 447 (569) |+... ..++..+.+|++ +++||++|+.+ +++||.|+.+ ...++...+++.|++.|+++|++|+++. T Consensus 547 ~~~~~d~~~~~~~~~p~s---~~vAGl~Ar~D~~~g~~~SPan~~~~~i~g~~~~~~~~~~~e~~~Ln~~gIn~i~~~-- 621 (749) T protein:vir:10 547 YKYIYDKYNDVYRYIPCN---GDTAGLCLQTNEISEPWFSPAGFQRGVLRNAIKLAYTPNKAQRDQLYANRVNPIVSF-- 621 (749) T ss_pred ceeeeccccCceEEechH---HHHHHHHHHhhccCCcEECcCCceeeeeeccccceeecChhHHHhhhhCCceEEEEe-- Confidence 98643 334555666754 88889998886 7889999764 2457788899999999999999999764 Q ss_pred CcceEEEEeeceeccCCCCchhhhhhhHHHHHHHHHHHHHHHHHhcCCcccCChHHHHHHHHHHHHHHHHHHhCCcccCC Q lcl|Aclame:pro 448 RTLTAFRVVQDVTTYNDKSDPVKNEMSVGEANDFLVSELKIELDNNFIGTKVIDTSASLIKNFIQSFLDNKKRAREIQDY 527 (569) Q Consensus 448 ~~~~~~ri~~~itT~~~~~d~~~~~i~v~R~~d~i~~~i~~~~~~~~iGk~nn~~~~~~v~~~i~~~L~~l~~~gaI~~~ 527 (569) .+.++|+|.+.|.. ..|+.|++|++||++|+|+++|++.. .+|++|||++.+|..|+..|+.||..||++|+|++| T Consensus 622 -~g~G~~~wG~rT~~--s~d~~~~~i~vRRl~~~ie~si~~~~-~~~v~epn~~~l~~~i~~~i~~fL~~l~~~G~i~~f 697 (749) T protein:vir:10 622 -PGQGVVLYGDKTAL--GFASAFDRINIRRLFLTVERVISTAA-KAQLFEQNDEAQRSLFINIVEPYLRDVQGRRGVVDF 697 (749) T ss_pred -cCCeEEEEcceecC--CCCcccceeehhhhHHHHHHHHHHHH-HHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCeeee Confidence 44579999998863 44678999999999999999999986 589999999999999999999999999999999987 Q ss_pred Ccc-----ccEEecCCCEEEEEEEEEEccceeEEEEEEEEEeeeeeC Q lcl|Aclame:pro 528 TPE-----EVQVVLEGDVASISMTVMPIRSLNKITVQLVYKQQILTA 569 (569) Q Consensus 528 ~~~-----d~~v~~~~d~~~v~~~v~pv~~~e~I~~ti~v~~~~~~~ 569 (569) ... +.+.++++++++|++.++|++|||||+++|.....-++- T Consensus 698 ~V~~d~~~Nt~~~i~~G~~~~~i~~~P~~pae~I~~~~~~~~~~~~~ 744 (749) T protein:vir:10 698 LVKCDSTNNTPEAVDRGEFYAEVFLKPTRTINYVQLTFVATRTGVSF 744 (749) T ss_pred EEEEcCCCCCHHHhhCCEEEEEEEEEecCCccEEEEEEEEeecCcch Confidence 431 234456789999999999999999999999855433332 No 24 >protein:vir:6594 Length: 666 # NCBI annotation: tail sheath protein # Family: family:all:661 # MgeID: mge:139 # MgeName: RB49 # Cross-refs: genbank:acc:NP_891725;genbank:gi:33620670;genbank:GeneID:1725344 Probab=100.00 E-value=7.5e-70 Score=399.54 Aligned_cols=544 Identities=14% Similarity=0.082 Sum_probs=315.4 Q ss_pred cceecCceEEEEEcCCCccccCCCCceEEEEeccCCCCCceeEEEcChHHHHHHhcCcchHHHHHHHhhhhhhhccCCce Q lcl|Aclame:pro 9 KKVSRPHTEITVDTSGIGGSSSSSDKTLMLVGSAKGGKPDTVYRFRNYQQAKQVLRSGDLLDAIELAWNASDVNTASAGD 88 (569) Q Consensus 9 ~~~~~PGvyi~~~~~~~~~~~~~~~~~~~~~g~a~~G~~~~~~~i~~~~~~~~~fg~g~l~~~~~~~~~~~~~~~~g~~~ 88 (569) =+|++|||||||.+ +.+++++++|++++|+|.++|||+++|++|+||.||++.||+- .+...+.|....+|+|||++ T Consensus 1 ~~~~~PgVyv~e~~-~~~~i~~v~ts~~~fvG~~~~Gp~~~p~~v~s~~~~~~~fG~~--~~~~~~~~~~~~~f~ngg~~ 77 (666) T protein:vir:65 1 MTLLSPGFETKETT-LSTTIVQSETGRAALVGKFQWGPAFQIIQVTNEVELVNKFGQP--DNNTADYFMSGANFLQYGND 77 (666) T ss_pred CceecCceEEEEec-CcccccccCcccceEEecccCCCCccCEEecCHHHHHHHcCCc--cccchhHHHHHHHHHhcCce Confidence 78999999999995 7789999999999999999999999999999999999999973 23334455566667899999 Q ss_pred EEEEEcCCC---ccceeeccceEEEEecCCc---ccceeEEEEecCCCCc-ceEEEEEecCCc-------eeeecc--cc Q lcl|Aclame:pro 89 ILAVRVEDA---KNATLTKGGLTFASTIYGV---DANEIQVALEDNNLTH-TKRLTVAFSKDG-------YKKVFD--NL 152 (569) Q Consensus 89 ~~~~rv~~~---~~a~~~~~~l~~~a~~~G~---~gn~i~v~~~~~~~~~-~~~~~~~~~~~~-------~~~~~~--~~ 152 (569) ||++|+.++ .++....+.+.+++..+|. ||+.+++......... ............ ...... .. T Consensus 78 ~~vvrv~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~V~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~~~~~~~~ 157 (666) T protein:vir:65 78 LRVVRVLNKEKAKNATALAGNVEFEITNEGSNYEVGDTIKIKHNRQDIETAGKVTKVDGDGKVKGVFIPTGKIIAHAKAI 157 (666) T ss_pred EEEEEccCcccccccccccCceeeeEeeccccccccceEEEEecccccccccccccccccccccccccccceeecccccc Confidence 999999443 3344445667777777766 8888888653321110 100000000000 000000 00 Q ss_pred cc--eeE----EEecCcc--cceeEEEEec--Cccceeeeeee--c--ccc-------ccccceeeeecccccccccee- Q lcl|Aclame:pro 153 GK--IFS----IQYKGSE--AQANFTIAQD--SISKKATTLTL--N--VGS-------EPESTTEVMKYELGQGVYSET- 210 (569) Q Consensus 153 ~~--~~~----v~~~G~~--a~a~~~v~~~--~~s~~~~~lt~--~--~~~-------~~~~~~~v~~~~l~~~~~~~~- 210 (569) +. .+. ..+.... ....+.+... ........+.. . .+. ..........+.-..+....+ T Consensus 158 g~~~~l~~~~~~~~~~~~~~~~~a~sv~~~~~~g~~~~~~~~~a~~~~~~~~~~~~~~~~~~~a~~A~~~g~~g~~i~v~ 237 (666) T protein:vir:65 158 GVYPELDGGWTAEFTSSSGNGSAALSVTKIVTDSGLLLTDLETSRANITNQTFLTKLKKYDMPAVSAIYAGEIGNSLEVE 237 (666) T ss_pred CcceeEeeccceeecccCcccccceeeeecccccceeeeeecccccccccccccccccccccceeeeeeccccccceeEE Confidence 00 000 0000000 0000000000 00000000000 0 000 000000000000000000000 Q ss_pred -hhhhhhcccccceeEEec--------------ccCC--cceecccccch-hhcccccc--ceeehhhhhhhhhh--hcc Q lcl|Aclame:pro 211 -NVLVSAINSLPDWEAKFF--------------PIGD--KNLPTDALEAV-TKVDVKTE--AVFVGALAGDIAKQ--LEY 268 (569) Q Consensus 211 -~~~~~~i~~~~~~~~~~~--------------~~~~--~~~~~~~~d~~-~~~~~~~~--~~~~~~~~~~~~~~--~~~ 268 (569) ..........+.+..... ...+ ..+.....+.. ....+... .............. ... T Consensus 238 i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (666) T protein:vir:65 238 ILARSAFKNTAPDLTMYPYGGERTAARNLIPYAPQNDNQYAFIVRRDGVVVESYVLSTLKGDKDVYGNSIYMDDFFARGS 317 (666) T ss_pred eecccccccccccccccccccccccceeeecccccccccceeeeecCCcccceeecccCcccccccchhhhhhhhhcccc Confidence 000000000000000000 0000 00000000000 00000000 00000000000011 112 Q ss_pred CceEEEEeccCccccccceeeeecCCCCCch-----------hHHHHHHHHHHhcC---ccEEEec------CCCHHHHH Q lcl|Aclame:pro 269 NDYVTVAVDATKPVEDFELTNLTGGSDGTAP-----------ESWANKFPLLANEG---GYYLVPL------TDKQAVHS 328 (569) Q Consensus 269 ~~~v~~~~~~~~~~a~~~~~~LtGG~dg~~~-----------~~~~~~l~~le~~~---~~~i~~~------~~d~~v~~ 328 (569) +.++..... ..+-.......|.||.++..+ .++..+++++++.+ ++.++++ ..+.+++. T Consensus 318 ~~~v~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~p~~~~~~~~~~~v~~ 396 (666) T protein:vir:65 318 SQYIYATAQ-GWVDGFSGIISLAGGVSANEATTGGVGADPFIGAMMQGWDLFAERESIHVNLLIAGACAGEGDAFSTVQK 396 (666) T ss_pred cceeeeecc-cccccccceEEccCCCCcCcccccccccccccccHHHHHHHHhhhhhccCCceeecCcCCccchhHHHHH Confidence 233332221 111111123457777775431 24666777776543 4444433 23468899 Q ss_pred HHHHHHHHHhcCCCeEEEEEc--------CCCCCCHHHHHHHhhh----------cCCceEEEEecccee-ccCCcceee Q lcl|Aclame:pro 329 EALAFVKDRTDNGDPMRIIVG--------GGTNETVEESITRATN----------LRDPRASLVGFSGTR-KMDDGRLLK 389 (569) Q Consensus 329 ~l~~~v~~~~~~g~~~~~vv~--------~~~~~~~~~~~~~a~~----------~n~~~v~~v~~~~~~-~~~~g~~~~ 389 (569) ++.+||+++++ ++++++ .+...+++++++.... |+|.+.++++||+.. ...++..+. T Consensus 397 ~l~~~~~~~~~----~~a~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~p~~~~~d~~~~~~~~ 472 (666) T protein:vir:65 397 HAVSIGDERQD----CLVMVSPPRSTVVNIPVTTAIDNLIAWREGSGNYNENNMNINTTYAVIDGNYKYQYDKYNDVNRW 472 (666) T ss_pred HHHHHHhhccc----eEEEeccccceeeecCCCCCHHHHHHHHHhcccccccccccCcceEEEEcCceEEecccCCceeE Confidence 99999998865 555554 4456778888776653 789999999999753 334555566 Q ss_pred echHHHHHHHHHHhhcCc----hhcCccceeec----cccccccCCHHHHHHHHhcCcEEEEEecCCcceEEEEeeceec Q lcl|Aclame:pro 390 LPGYMMASQIAGIASGLE----VGEAITFKHFN----VTSVDRVFESSQLDMLNESGVISIEFVRNRTLTAFRVVQDVTT 461 (569) Q Consensus 390 ~~~~~~aa~vAG~~A~~~----~~~s~T~~~~~----~~~~~~~~t~~e~~~l~~~Gv~~l~~~~~~~~~~~ri~~~itT 461 (569) +|++ +++||++|..+ +++||.|+.+. ..++...+++.|++.|+++|++|+++. .+.++|+|.+.|. T Consensus 473 ~p~s---g~vAGl~Ar~D~~~g~~~span~~~~~i~g~~~~~~~~~~~~~~~Ln~~gIn~i~~~---~~~G~~~wG~rT~ 546 (666) T protein:vir:65 473 VPLA---ADIAGLCARTDAVSQPWMSPAGYNRGQIMNVVKLAIEPRKAHRDRLYQAAINPVIGA---GGEGFILMGDKTA 546 (666) T ss_pred echH---HHHHHHHHHHhccCCcEEccCCeecceeeccccceeecChhHHHhhhhCCceEEEEe---CCCeEEEEecccC Confidence 6764 88888888775 77899998753 346777899999999999999999764 4558999999987 Q ss_pred cCCCCchhhhhhhHHHHHHHHHHHHHHHHHhcCCcccCChHHHHHHHHHHHHHHHHHHhCCcccCCCc-----cccEEec Q lcl|Aclame:pro 462 YNDKSDPVKNEMSVGEANDFLVSELKIELDNNFIGTKVIDTSASLIKNFIQSFLDNKKRAREIQDYTP-----EEVQVVL 536 (569) Q Consensus 462 ~~~~~d~~~~~i~v~R~~d~i~~~i~~~~~~~~iGk~nn~~~~~~v~~~i~~~L~~l~~~gaI~~~~~-----~d~~v~~ 536 (569) . ..+..|++|++||++|+|+++|++.. .+|+||||++.+|..|+..|+.||.+||++|+|.+|.. .+.+.++ T Consensus 547 ~--~~~s~~~~i~vrR~~~~i~~si~~~~-~~~v~epn~~~l~~~i~~~i~~~L~~l~~~gal~g~~V~~d~~~nt~~~i 623 (666) T protein:vir:65 547 T--TVPSPFDRINVRRLFNMLKKNIGDSS-KYKLFENNDNFTRASFRMEVSQYLSTIRSLGGIYDFRVQCDTTNNTPDVI 623 (666) T ss_pred C--CCCcccceEehhhHHHHHHHHHHHHH-HHhccCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeEEEEcCCCCCHHHh Confidence 3 33458999999999999999999986 68999999999999999999999999999999999753 2334567 Q ss_pred CCCEEEEEEEEEEccceeEEEEEEEEEeeeeeC Q lcl|Aclame:pro 537 EGDVASISMTVMPIRSLNKITVQLVYKQQILTA 569 (569) Q Consensus 537 ~~d~~~v~~~v~pv~~~e~I~~ti~v~~~~~~~ 569 (569) ++++++|++.++|++|||||+++|.....-++- T Consensus 624 ~~G~~~~~i~~~p~~pae~i~~~~~~~~~~~~~ 656 (666) T protein:vir:65 624 DRNEFVASMFIKPAKSINYIMLNFTAVATGSDF 656 (666) T ss_pred hCCeEEEEEEEEecCCcceEEEEEEEeecCccH Confidence 889999999999999999999999865543222 No 25 >protein:vir:98263 Length: 664 # NCBI annotation: gp18 tail sheath monomer # Family: family:all:661 # MgeID: mge:1667 # MgeName: RB43 # Cross-refs: genbank:acc:YP_239196;genbank:gi:66391671;genbank:GeneID:3416365 Probab=100.00 E-value=3.1e-69 Score=396.17 Aligned_cols=541 Identities=14% Similarity=0.076 Sum_probs=307.7 Q ss_pred CCCccccCcceecCceEEEEEcCCCccccCCCCceEEEEeccCCCCCceeEEEcChHHHHHHhcCcchHHHHHHHhhhhh Q lcl|Aclame:pro 1 MAVEQFPRKKVSRPHTEITVDTSGIGGSSSSSDKTLMLVGSAKGGKPDTVYRFRNYQQAKQVLRSGDLLDAIELAWNASD 80 (569) Q Consensus 1 ma~~~~~~~~~~~PGvyi~~~~~~~~~~~~~~~~~~~~~g~a~~G~~~~~~~i~~~~~~~~~fg~g~l~~~~~~~~~~~~ 80 (569) || |++|||||||.+ +.++++++++++++|+|.++|||+++|++|+||.||++.||+- .+.-.+.|.... T Consensus 1 ma--------~~~PgVyv~E~~-~~~~i~~~~ts~~~~vG~~~~Gp~~~p~~i~s~~d~~~~fG~~--~~~~~~~~~v~~ 69 (664) T protein:vir:98 1 MA--------LQSPGIETKETS-VQSTVVRNSTGRAAIVGKFSWGPAYQIRQISNEVELVNYFGAP--DNLTADYFMSAV 69 (664) T ss_pred Cc--------eecCceEEEecC-CCcccccccccceEEEeeccCCCCCccEEecCHHHHHHhcCCc--cccchhHHHHHH Confidence 44 689999999996 7899999999999999999999999999999999999999973 233345566666 Q ss_pred hhccCCceEEEEEcCCCc---cceeeccceE----------------------------EEEecCCcccceeEEEEecCC Q lcl|Aclame:pro 81 VNTASAGDILAVRVEDAK---NATLTKGGLT----------------------------FASTIYGVDANEIQVALEDNN 129 (569) Q Consensus 81 ~~~~g~~~~~~~rv~~~~---~a~~~~~~l~----------------------------~~a~~~G~~gn~i~v~~~~~~ 129 (569) +|+|||++||++|+.++. +|+...+.+. +.+..+|.|||.+++.+.+.. T Consensus 70 ~f~ngg~~~~vvRv~~~~~~~~a~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~gn~~~v~i~~~~ 149 (664) T protein:vir:98 70 NFLQYGNDLRLVRVVDKDAAKNASAIFNQIKTTIASQGSNYNVGDVIKVKYSNTVVEENGKVTQVDSNGKILAVTIPKRK 149 (664) T ss_pred HHHhcCCeEEEEEecCccccccccccccccceeeccCCcccccccceeEeecCcccccceeeccCCCCCceeeEeeccCc Confidence 779999999999985432 2222122222 235567777777776554322 Q ss_pred CCcceEEEEEecCCceeeecccccceeEEEecCcc---------cceeEEEEe-----cCccc-eeeeeeecccccc--- Q lcl|Aclame:pro 130 LTHTKRLTVAFSKDGYKKVFDNLGKIFSIQYKGSE---------AQANFTIAQ-----DSISK-KATTLTLNVGSEP--- 191 (569) Q Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~G~~---------a~a~~~v~~-----~~~s~-~~~~lt~~~~~~~--- 191 (569) ... +..-............... +.....+.. ....+.+.. ..... ............. T Consensus 150 ~~~---~~~~~~~~~~~~~~~~~~s-~~~~s~g~a~a~~v~~v~~d~~~~~~~~~~a~~~i~~~~~~~~~~~~~~~~~~a 225 (664) T protein:vir:98 150 KSL---LVLNRSVLTQIFLLVGTTE-IVSQSSGVSASITIDGIESDSGITLLNLDIAKETIQGTSFQTLTQKYQIPSVVA 225 (664) T ss_pred cce---eecccccccccceecccce-eeeeecccceeeecccccccceeeccccceeeeccccccceeeeeccccceeee Confidence 110 0000000000000000000 000000000 000000000 00000 0000000000000 Q ss_pred ------ccceee--eec-cccccccceehhhhhhcccccceeEEecccCCc--ceecccccchhh-----ccccccceee Q lcl|Aclame:pro 192 ------ESTTEV--MKY-ELGQGVYSETNVLVSAINSLPDWEAKFFPIGDK--NLPTDALEAVTK-----VDVKTEAVFV 255 (569) Q Consensus 192 ------~~~~~v--~~~-~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~--~~~~~~~d~~~~-----~~~~~~~~~~ 255 (569) ...+++ ... ....+...........+.........+....+. .+.....+.+.. .....+.... T Consensus 226 ~~~G~~Gn~isv~i~s~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~ 305 (664) T protein:vir:98 226 LYPGELGSTVQVEIISKAAYDTGAMISGYPSGISVKNSGRSVMTYGPQTDNQYAFVVRRGGIVQESFIVSTDKTDKDIYG 305 (664) T ss_pred eecccccceeeeeecccccccCcceEeeccCceecccceeeeeeccccCccceeEEEecCCceeeeEEeecccCccccee Confidence 000000 000 000000000000000000000000000000000 000000000000 0000000000 Q ss_pred hhhhhhhhhhhccCceEEEEeccCccccccceeeeecCCCCC---chhHHHHHHHHHHhcC---ccEEEecC-C-C---- Q lcl|Aclame:pro 256 GALAGDIAKQLEYNDYVTVAVDATKPVEDFELTNLTGGSDGT---APESWANKFPLLANEG---GYYLVPLT-D-K---- 323 (569) Q Consensus 256 ~~~~~~~~~~~~~~~~v~~~~~~~~~~a~~~~~~LtGG~dg~---~~~~~~~~l~~le~~~---~~~i~~~~-~-d---- 323 (569) .............+.++.... ...+.+......+.||.+.. ...+...++.+|++.+ .++++++. . + T Consensus 306 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~gg~~~~~~~g~~~~~tgl~~l~~~~~~~~~ll~~p~~~~~~~~~ 384 (664) T protein:vir:98 306 VNIYMDDFFANGGSQYVFGTS-MNWPKGFSGILEFGGGLSSNDTVGADELMTGWDMFADREALHVPLLIAGGCAGESVEI 384 (664) T ss_pred eeeechhheecccceeeeeec-ccCCcccceeEeccCccccccccCchhHHHHHHhhhcccccccceEEecCCCCCcHHH Confidence 000000000011222332221 12222222345678888754 2345777788887654 34444432 1 1 Q ss_pred -HHHHHHHHHHHHHHhcCCCeEEEEEcCC--------CCCCHHHHHHHhh--------------hcCCceEEEEecccee Q lcl|Aclame:pro 324 -QAVHSEALAFVKDRTDNGDPMRIIVGGG--------TNETVEESITRAT--------------NLRDPRASLVGFSGTR 380 (569) Q Consensus 324 -~~v~~~l~~~v~~~~~~g~~~~~vv~~~--------~~~~~~~~~~~a~--------------~~n~~~v~~v~~~~~~ 380 (569) .+++.++.+||+++++ ++++++.+ ...+.+++++... .|++.+.++++||+.. T Consensus 385 ~~~v~~al~~~a~~~~~----~~a~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~p~~~~ 460 (664) T protein:vir:98 385 ASTVQKHVISIGDERQD----CTVFVSPPRSLLVNIPLATAVDNIVEWRTGYKISGGTPVDNNLNVSSSYGFLDGNYKYQ 460 (664) T ss_pred HHHHHHHHHHHHHhcCC----eEEEEccccceeccCCccccHHHHHHHhhhccccccchhhhhcCCccceEEEEcCeEEE Confidence 3578888888888754 77776654 3456666665543 4889999999999864 Q ss_pred c-cCCcceeeechHHHHHHHHHHhhcCc----hhcCccceeec----cccccccCCHHHHHHHHhcCcEEEEEecCCcce Q lcl|Aclame:pro 381 K-MDDGRLLKLPGYMMASQIAGIASGLE----VGEAITFKHFN----VTSVDRVFESSQLDMLNESGVISIEFVRNRTLT 451 (569) Q Consensus 381 ~-~~~g~~~~~~~~~~aa~vAG~~A~~~----~~~s~T~~~~~----~~~~~~~~t~~e~~~l~~~Gv~~l~~~~~~~~~ 451 (569) . ..++..+.+|++ +++||++|..+ +++||.|+.+. ..++...+++.|++.|+++|++|++...+ .. T Consensus 461 ~d~~~~~~~~~p~s---g~~AGl~A~~D~~~g~~~span~~~~~i~g~~~~~~~~~~~~~~~Ln~~gIn~i~~~~~--~~ 535 (664) T protein:vir:98 461 YDKYNDVNRWVPLA---GDIAGLCVYTDSVANPWMSPAGYNRGQIRNCIKLAIEPRTAHRDAMYQVQINPVTGFAG--GS 535 (664) T ss_pred ecccCCceEEechH---HHHHHHHHHhhhcCCcEECcCCceeeeeeccccceeecChhhHHHHHhCCCeEEEEeeC--CC Confidence 3 234445556654 78888888776 78899998753 35677789999999999999999976432 35 Q ss_pred EEEEeeceeccCCCCchhhhhhhHHHHHHHHHHHHHHHHHhcCCcccCChHHHHHHHHHHHHHHHHHHhCCcccCCCc-- Q lcl|Aclame:pro 452 AFRVVQDVTTYNDKSDPVKNEMSVGEANDFLVSELKIELDNNFIGTKVIDTSASLIKNFIQSFLDNKKRAREIQDYTP-- 529 (569) Q Consensus 452 ~~ri~~~itT~~~~~d~~~~~i~v~R~~d~i~~~i~~~~~~~~iGk~nn~~~~~~v~~~i~~~L~~l~~~gaI~~~~~-- 529 (569) ++|+|.+.|.. ..+..|++|++||++++|+++|++.. .++++|||++.+|..|+..|+.||..||++|+|.||.. T Consensus 536 G~~~wG~rT~~--~~~s~~~~i~vrR~~~~i~~si~~~~-~~~v~epn~~~l~~~i~~~i~~~L~~l~~~gal~g~~V~~ 612 (664) T protein:vir:98 536 GFVLYGDKTLT--SVPSPFDRINVRRLFNMIKKDIGDNA-KYKLFENNDDFTRASFRMDTGQYMTNIRALGGCYDYRVIC 612 (664) T ss_pred cEEEEcccccC--CCCcccceEeehhHHHHHHHHHHHHH-HHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCceeeeEEEE Confidence 78999998762 33457999999999999999999986 58999999999999999999999999999999999742 Q ss_pred ---cccEEecCCCEEEEEEEEEEccceeEEEEEEEEEeeeeeC Q lcl|Aclame:pro 530 ---EEVQVVLEGDVASISMTVMPIRSLNKITVQLVYKQQILTA 569 (569) Q Consensus 530 ---~d~~v~~~~d~~~v~~~v~pv~~~e~I~~ti~v~~~~~~~ 569 (569) .+.+.++++++++|++.++|++|+|||+++|...-.-++- T Consensus 613 d~~~nt~~~i~~G~~~~~i~~~p~~pae~I~~~~~q~~~~~~~ 655 (664) T protein:vir:98 613 DTTNNTPDVIDRNEFVATVYVKPPRSINYITLNFVATSTGADF 655 (664) T ss_pred cCCCCCHHHhhCCeEEEEEEEEecCCcceEEEEEEEeecCcch Confidence 1234567789999999999999999999999855333222 No 26 >protein:vir:80984 Length: 666 # NCBI annotation: gp18 tail sheath protein # Family: family:all:661 # MgeID: mge:1888 # MgeName: Phi1 # Cross-refs: genbank:acc:YP_001469499;genbank:gi:157311456;genbank:GeneID:5602117 Probab=100.00 E-value=3.7e-69 Score=395.74 Aligned_cols=548 Identities=14% Similarity=0.081 Sum_probs=315.3 Q ss_pred cceecCceEEEEEcCCCccccCCCCceEEEEeccCCCCCceeEEEcChHHHHHHhcCcchHHHHHHHhhhhhhhccCCce Q lcl|Aclame:pro 9 KKVSRPHTEITVDTSGIGGSSSSSDKTLMLVGSAKGGKPDTVYRFRNYQQAKQVLRSGDLLDAIELAWNASDVNTASAGD 88 (569) Q Consensus 9 ~~~~~PGvyi~~~~~~~~~~~~~~~~~~~~~g~a~~G~~~~~~~i~~~~~~~~~fg~g~l~~~~~~~~~~~~~~~~g~~~ 88 (569) =+|++|||||||.+ +.+++.+++|++++|+|.++|||+++|++|+||.||++.||+- .+.-++.|....+|+|||++ T Consensus 1 ~~~~~Pgvyv~e~~-~~~~~~~~~t~~~~~vg~~~~gp~~~p~~i~~~~~~~~~fg~~--~~~~~~~~~~~~~f~~~g~~ 77 (666) T protein:vir:80 1 MTLLSPGFETKETT-LSTTIVQSATGRAALVGKFQWGPAFQIIQVTNEVELVNKFGQP--DNNTADYFMSGANFLQYGND 77 (666) T ss_pred CceecCceEEEEec-CCccccccCcccceEEeccccCCCccceEecCHHHHHHhcCCc--cCccchHHHHHHHHhcCCCe Confidence 78999999999995 7789999999999999999999999999999999999999962 23334445555667899999 Q ss_pred EEEEEcCCC---ccceeeccceEEEEecCCc---ccceeEEEEecCCCCcceEEEEEecCCceeeecccc---------- Q lcl|Aclame:pro 89 ILAVRVEDA---KNATLTKGGLTFASTIYGV---DANEIQVALEDNNLTHTKRLTVAFSKDGYKKVFDNL---------- 152 (569) Q Consensus 89 ~~~~rv~~~---~~a~~~~~~l~~~a~~~G~---~gn~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------- 152 (569) ||++|+.++ .+|....+.+.++++.+|. +|+.+++...............+.....+..+.... T Consensus 78 ~~v~R~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~ta~~~~~a~~~ 157 (666) T protein:vir:80 78 LRVVRVLNKEKAKNATALAGNIEFEITNEGSNYEVGDTIKIKHNRQDIETAGKVTKVDGDGKVKGVFIPTGKIIAHAKAI 157 (666) T ss_pred EEEEEecCccccccccccccceeEEEeeccccccccccccccccCcccccCcceEEEeecceeeeeecchhhhccccccc Confidence 999998433 3344445678999999985 677766643222211111111111111111111000 Q ss_pred c------ceeEEEecCcc--cceeEEEEe--cCccceeeeeee-c-cccccc---------cceeeeeccccccccceeh Q lcl|Aclame:pro 153 G------KIFSIQYKGSE--AQANFTIAQ--DSISKKATTLTL-N-VGSEPE---------STTEVMKYELGQGVYSETN 211 (569) Q Consensus 153 ~------~~~~v~~~G~~--a~a~~~v~~--~~~s~~~~~lt~-~-~~~~~~---------~~~~v~~~~l~~~~~~~~~ 211 (569) + ......+.... ....+.+.. .+.......... . ...... .......+.-..+....+. T Consensus 158 ~~~~~v~~~~~~~~~~~~~~~~~a~~V~~~~~~~~~~~~~~~~a~~~~t~~~~~~~~~~~~~~a~~a~~~g~~g~~l~v~ 237 (666) T protein:vir:80 158 GVYPELDGDWTAEFTSSSGNGSAALSVTKIVTDSGLLLTDLETSRANITNQTFLTKLQKYDMPAVSAIYAGEIGNSLEVE 237 (666) T ss_pred cccceeeccceeeeccccccceeeeeeeeeecCCccceeeeccccccccccccccccccccchhhhhhcccccccceeee Confidence 0 00001111100 000111100 000000000000 0 000000 0000000000000000000 Q ss_pred h--hhhhcccccceeEEeccc--------------CC--cceecccccchh-hccccccceeehhhh-hhhhhh-h--cc Q lcl|Aclame:pro 212 V--LVSAINSLPDWEAKFFPI--------------GD--KNLPTDALEAVT-KVDVKTEAVFVGALA-GDIAKQ-L--EY 268 (569) Q Consensus 212 ~--~~~~i~~~~~~~~~~~~~--------------~~--~~~~~~~~d~~~-~~~~~~~~~~~~~~~-~~~~~~-~--~~ 268 (569) . .....+..+.+....... .+ ..+....-+.+. ...+........... ...... . .. T Consensus 238 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (666) T protein:vir:80 238 ILARSAFKNTAPDLTMYPYGGERTAARNLIPYAPQNDNQYAFIVRRDGVVVESYVLSTLKGDKDVYGNSIYMDDFFGRGS 317 (666) T ss_pred eccccccccccccceeeeccccccccceeeeeccccccceeeEeccCCccceeeecccccccccccchhhhhhhhhcccc Confidence 0 000000000000000000 00 000000000000 000000000000000 000000 0 11 Q ss_pred CceEEEEeccCccccccceeeeecCCCCCch--------------hHHHHHHHHHHhcCccEEEecC------CCHHHHH Q lcl|Aclame:pro 269 NDYVTVAVDATKPVEDFELTNLTGGSDGTAP--------------ESWANKFPLLANEGGYYLVPLT------DKQAVHS 328 (569) Q Consensus 269 ~~~v~~~~~~~~~~a~~~~~~LtGG~dg~~~--------------~~~~~~l~~le~~~~~~i~~~~------~d~~v~~ 328 (569) ..++........+. ......|.||.++... ..-...+...+..++++++++. ..++++. T Consensus 318 ~~~~~~~~~~~~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~p~~~~~~~~~~~v~~ 396 (666) T protein:vir:80 318 SQYIYATAQGWVDG-FSGIISLAGGVSANEATTGGVGADPFIGAMMQGWGLFAERESIHVNLLIAGACAGEGDAFSTVQK 396 (666) T ss_pred ceeeeecccccccc-cceEEEecCCCCcccccccccccccccccchhhhhhhhhhcccccceEeecCcCCcccchHHHHH Confidence 22222222111111 1112357777664321 0122233333445566665542 2467899 Q ss_pred HHHHHHHHHhcC----CCeEEEEEcCCCCCCHHHHHHHhh----------hcCCceEEEEeccceec-cCCcceeeechH Q lcl|Aclame:pro 329 EALAFVKDRTDN----GDPMRIIVGGGTNETVEESITRAT----------NLRDPRASLVGFSGTRK-MDDGRLLKLPGY 393 (569) Q Consensus 329 ~l~~~v~~~~~~----g~~~~~vv~~~~~~~~~~~~~~a~----------~~n~~~v~~v~~~~~~~-~~~g~~~~~~~~ 393 (569) ++.+||++|++. .-.++++++.+++.++++++++.. .|+|.++++++||+... ..++..+.+|++ T Consensus 397 ~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~p~~~~~d~~~~~~~~~p~s 476 (666) T protein:vir:80 397 HAVSIGDERQDCLVMVSPPRSTVVNIPVTTAIDNLIAWREGSGNYNENNMNINTTYAVIDGNYKYQYDKYNDVNRWVPLA 476 (666) T ss_pred HHHHHHHhhcceEEEeecceeEEeecCCCCCHHHHHHHHHhcccchhhhcccCcceEEEEcCceEEecccCCceeEechH Confidence 999999988652 334566666677788898887764 38899999999998543 334555666654 Q ss_pred HHHHHHHHHhhcCc----hhcCccceeec----cccccccCCHHHHHHHHhcCcEEEEEecCCcceEEEEeeceeccCCC Q lcl|Aclame:pro 394 MMASQIAGIASGLE----VGEAITFKHFN----VTSVDRVFESSQLDMLNESGVISIEFVRNRTLTAFRVVQDVTTYNDK 465 (569) Q Consensus 394 ~~aa~vAG~~A~~~----~~~s~T~~~~~----~~~~~~~~t~~e~~~l~~~Gv~~l~~~~~~~~~~~ri~~~itT~~~~ 465 (569) +.+||++|..+ +++||.|+.+. ..++...+++.|++.|+++|++|+++. ++.++|+|.+.|.. . T Consensus 477 ---g~~AGl~Ar~D~~~g~~~sPan~~~~~i~g~~~~~~~~~~~~~~~Ln~~gIn~i~~~---~g~G~~~wG~rT~~--~ 548 (666) T protein:vir:80 477 ---ADIAGLCARTDAVSQPWMSPAGYNRGQIMNVVKLAIEPRKAHRDRLYQAAINPVIGA---GGEGFILMGDKTAT--T 548 (666) T ss_pred ---HHHHHHHHHHhhcCCceEccCCeecceeeccccceeecChhHHHhhhhCCeeEEEEe---CCCeEEEEccccCC--C Confidence 78888888765 67799999653 357778899999999999999999754 45589999998863 2 Q ss_pred CchhhhhhhHHHHHHHHHHHHHHHHHhcCCcccCChHHHHHHHHHHHHHHHHHHhCCcccCCCc-----cccEEecCCCE Q lcl|Aclame:pro 466 SDPVKNEMSVGEANDFLVSELKIELDNNFIGTKVIDTSASLIKNFIQSFLDNKKRAREIQDYTP-----EEVQVVLEGDV 540 (569) Q Consensus 466 ~d~~~~~i~v~R~~d~i~~~i~~~~~~~~iGk~nn~~~~~~v~~~i~~~L~~l~~~gaI~~~~~-----~d~~v~~~~d~ 540 (569) .+..|++|++||++|+|+++|++.. .+|++|||++.+|..|+..|+.||.+||++|+|.||.. .+.+.++++++ T Consensus 549 ~~s~~~~i~vRRl~~~i~~si~~~~-~~~v~epn~~~l~~~i~~~i~~~L~~l~~~gal~g~~V~~d~~~nt~~di~~G~ 627 (666) T protein:vir:80 549 VPSPFDRINVRRLFNMLKKNIGDSS-KYKLFENNDNFTRASFRMEVSQYLSTIRSLGGIYDFRVQCDTTNNTPDVIDRNE 627 (666) T ss_pred CCcccceeehhhHHHHHHHHHHHHH-HHhccCCCCHHHHHHHHHHHHHHHHHHHhcCceeeeEEEEcCCCCCHHHhhCCe Confidence 3458999999999999999999986 58999999999999999999999999999999999753 23355678899 Q ss_pred EEEEEEEEEccceeEEEEEEEEEeeeeeC Q lcl|Aclame:pro 541 ASISMTVMPIRSLNKITVQLVYKQQILTA 569 (569) Q Consensus 541 ~~v~~~v~pv~~~e~I~~ti~v~~~~~~~ 569 (569) ++|++.++|++|||||++||.....-++- T Consensus 628 ~~~~i~~~P~~Pae~I~~~~~~~~~~~~~ 656 (666) T protein:vir:80 628 FVASMFIKPAKSINYIMLNFTAVATGSDF 656 (666) T ss_pred EEEEEEEEecCCcceEEEEEEEeecCccH Confidence 99999999999999999999855443332 No 27 >protein:vir:107310 Length: 581 # NCBI annotation: gp123 # Family: family:all:1196 # MgeID: mge:1550 # MgeName: Catera # Cross-refs: genbank:acc:YP_656131;genbank:gi:109393333;genbank:GeneID:4156791 Probab=100.00 E-value=4.7e-69 Score=395.17 Aligned_cols=517 Identities=16% Similarity=0.138 Sum_probs=304.4 Q ss_pred CCCccccCcceecCceEEEEEcCCCccccCCCCceEEEEeccCCCCCceeEEEcChHHHHHHhcC--c-chHHHHHHHhh Q lcl|Aclame:pro 1 MAVEQFPRKKVSRPHTEITVDTSGIGGSSSSSDKTLMLVGSAKGGKPDTVYRFRNYQQAKQVLRS--G-DLLDAIELAWN 77 (569) Q Consensus 1 ma~~~~~~~~~~~PGvyi~~~~~~~~~~~~~~~~~~~~~g~a~~G~~~~~~~i~~~~~~~~~fg~--g-~l~~~~~~~~~ 77 (569) |+.-.|. |-.||.|-.-.++. ..|..+.+ |. .+ .+||- | .-.+ ..+... T Consensus 1 ~~~~~~~---~~~~~~~~~~~~~~---~~g~~~~~----------~~----~~-------~i~g~~~g~~g~~-~s~~~~ 52 (581) T protein:vir:10 1 MAIDFSQ---YQTPGVYTEAVGAP---QLGIRSSV----------PT----AV-------AIFGTAVGYQTYR-ESIRIN 52 (581) T ss_pred Ceeeecc---ccccchhhhhcccc---ccceeeee----------cc----cc-------ccccccccccccc-cccccC Confidence 8887763 55677764333332 22222211 10 00 11110 0 0000 011222 Q ss_pred hhhhhccCCceEEEEEcCCCccceeeccceEEEEecCCcccceeEEEEecCCCCcceEEEEEecCCceeeecccccceeE Q lcl|Aclame:pro 78 ASDVNTASAGDILAVRVEDAKNATLTKGGLTFASTIYGVDANEIQVALEDNNLTHTKRLTVAFSKDGYKKVFDNLGKIFS 157 (569) Q Consensus 78 ~~~~~~~g~~~~~~~rv~~~~~a~~~~~~l~~~a~~~G~~gn~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (569) |.....+-...+.+..-..+..-+++-++.+-..-.+.+-.++++.+++.-...++..+++.. ..++.+. T Consensus 53 p~~~~~~e~q~v~~~~~~t~GtFtLsf~G~tT~~I~~~asa~~v~~AL~~L~~i~~~~v~v~g----------~~g~~~~ 122 (581) T protein:vir:10 53 PDTGETITTQILALVGEPTGGSFKLSLAGEPTGNIPFNATQGQVQSALRALPNVEDDEVTVLG----------DPGGPWT 122 (581) T ss_pred CCCCCccceEEEEEEecCCCceEEEEeCceecccccccCCHHHHHHHHhccCCCCcceEEEEC----------CCCceEE Confidence 322111111122221111111112222222222223333344455444433222233333322 1233455 Q ss_pred EEecCcccceeEEEE-ecCccceeeeeeeccccccccceeeeeccccccccceehhhhhhcccccceeEEecccCCccee Q lcl|Aclame:pro 158 IQYKGSEAQANFTIA-QDSISKKATTLTLNVGSEPESTTEVMKYELGQGVYSETNVLVSAINSLPDWEAKFFPIGDKNLP 236 (569) Q Consensus 158 v~~~G~~a~a~~~v~-~~~~s~~~~~lt~~~~~~~~~~~~v~~~~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 236 (569) |.|.|..+.-...+. ..+++ ...+++..... ............+....+..++.....+..++. .+..+. T Consensus 123 VtF~g~~~~l~~~~~~lt~g~--~~~vtV~~~~~--g~~~~~~~~s~~gi~~~~~~l~~~~~~~~~~~g-----sd~~~~ 193 (581) T protein:vir:10 123 VTFTKAVAALTKDVTGLTGGD--DPDLNIASEQT--GVPAMNRALAKKGIKTDTIRVVNPNSGQVYVLG-----TDYVVT 193 (581) T ss_pred EEEcCCccceeeeeceecCCC--ceeEEEecccc--CcccccccccccccccccccccccccCcceecc-----ccceee Confidence 555544332111110 00011 11111110000 000000000000011111111111111111111 011111 Q ss_pred cccccchhhcccccc-------------------------------ceeehhhhhhhhh------hhccCceEEEEeccC Q lcl|Aclame:pro 237 TDALEAVTKVDVKTE-------------------------------AVFVGALAGDIAK------QLEYNDYVTVAVDAT 279 (569) Q Consensus 237 ~~~~d~~~~~~~~~~-------------------------------~~~~~~~~~~~~~------~~~~~~~v~~~~~~~ 279 (569) ..+.|......++.+ +++......++.+ ...++..-++..... T Consensus 194 ~~~~~~~~~~~~~~D~~t~~~~~~g~~~~~~~v~~~~~~~~d~~~~~~v~~~~~~~~~~~~~~~~~~~g~~~~~~t~~~~ 273 (581) T protein:vir:10 194 RVNAGEDGEANTRDDLYTIQRVVDGGHIDPGDIVQLSYRYTDPNYHEVIRFTDPDDIQDFYGPAFDEAGNVQSEITLCAQ 273 (581) T ss_pred ecccCccccccccccceeeeeeecccccccceEEEEEEEeecCCcceeEEeecCcchhhhhhhhhhccCccccchhhhhe Confidence 111111111111110 0010001111110 111111111222223 Q ss_pred ccccccceeeeecCCCCC----chhHHHHHHHHHHhcCccEE-EecCCCHHHHHHHHHHHHHHhcCCCeEEE---EEcCC Q lcl|Aclame:pro 280 KPVEDFELTNLTGGSDGT----APESWANKFPLLANEGGYYL-VPLTDKQAVHSEALAFVKDRTDNGDPMRI---IVGGG 351 (569) Q Consensus 280 ~~~a~~~~~~LtGG~dg~----~~~~~~~~l~~le~~~~~~i-~~~~~d~~v~~~l~~~v~~~~~~g~~~~~---vv~~~ 351 (569) ..+++.+...|+||.|+. ...||.++|++||+++++.| ++++.++++|++|++||++|+++++++++ |.++. T Consensus 274 ~~~tn~~~~~l~~gvd~~g~tvt~~dy~~Al~ale~~~~~~ivv~~t~~~~v~a~l~ahv~~~s~~~~~~ravigV~g~~ 353 (581) T protein:vir:10 274 LAITNGASTILACAVDPEGDTVTMGDYQNALNKFRDEDEIAIIVAGTGAQPIQALVQQHVSAQSNNKYERRAILGMDGSV 353 (581) T ss_pred eeeecccceeEEeeccCCCCccchHHHHHHHHHHhcCCceEEEEeCCCCHHHHHHHHHHHHHHHhccCCcEEEEEecCCC Confidence 446677788899999874 34689999999999998765 66788899999999999999987766654 44455 Q ss_pred CCCCHHHHHHHhhhcCCceEEEEeccceeccC--CcceeeechHHHHHHHHHHhhcCchhcCccceeec-cccccccCCH Q lcl|Aclame:pro 352 TNETVEESITRATNLRDPRASLVGFSGTRKMD--DGRLLKLPGYMMASQIAGIASGLEVGEAITFKHFN-VTSVDRVFES 428 (569) Q Consensus 352 ~~~~~~~~~~~a~~~n~~~v~~v~~~~~~~~~--~g~~~~~~~~~~aa~vAG~~A~~~~~~s~T~~~~~-~~~~~~~~t~ 428 (569) ...+.+++++++..||++|+++++|+...... .++...+|+|++||++||++|+.++++||||++++ +.++..+|++ T Consensus 354 ~~~~~~~~~~~a~~~n~~Rvvlv~p~~~~~~g~~~~~~v~lp~y~~AA~vAGl~a~~~~~~slT~~~i~gi~~l~~~~s~ 433 (581) T protein:vir:10 354 TPVPSATRIANAQSIKDQRVALISPSSFVYYAPELNREVVLGGQFMAAAVAGKSVSAIAAMPLTRKVIRGFSGPAEVQRD 433 (581) T ss_pred CCccHHHHHHhhccCCCceEEEEecCceeecCcccCceeccchhhHHHHHHHHhhccccccCcccccccccccccccCCH Confidence 66678888999999999999999998755433 34567899999999999999999999999999997 7789999999 Q ss_pred HHHHHHHhcCcEEEEEecCCcceEEEEeeceeccCCCCchhhhhhhHHHHHHHHHHHHHHHHH-hcCCcccCChHHHHHH Q lcl|Aclame:pro 429 SQLDMLNESGVISIEFVRNRTLTAFRVVQDVTTYNDKSDPVKNEMSVGEANDFLVSELKIELD-NNFIGTKVIDTSASLI 507 (569) Q Consensus 429 ~e~~~l~~~Gv~~l~~~~~~~~~~~ri~~~itT~~~~~d~~~~~i~v~R~~d~i~~~i~~~~~-~~~iGk~nn~~~~~~v 507 (569) +|+++|+++|+++|++.++ +++||+++|||+. +|+.|++|+++|++|++.++||+.++ ++||||+|++..|.+| T Consensus 434 ~e~e~ll~~Gv~~l~~~~~---~~v~Iv~gItT~~--s~~~~~~i~~iR~~D~v~~~ir~~~~~~~fIG~~n~~~~r~~i 508 (581) T protein:vir:10 434 GEKSRESSEGLMVIEKTPR---NLVHVRHGVTTDP--TSLHTREWNIIGQQDVMVYRIRDYLDADGLIGMPIYDTTIVQV 508 (581) T ss_pred HHHHHHHhCCeEEEEEecC---CeEEEEeeeecCC--CCCcceeeeeehhhhHHHHHHHHHhhhhcCCCcccCHHHHHHH Confidence 9999999999999987544 4789999999985 46789999999999999999999985 7899999999999999 Q ss_pred HHHHHHHHHHHHhCCcccCCCc-cccEEecCCCEEEEEEEEEEccceeEEEEEEEEEeeee--eC Q lcl|Aclame:pro 508 KNFIQSFLDNKKRAREIQDYTP-EEVQVVLEGDVASISMTVMPIRSLNKITVQLVYKQQIL--TA 569 (569) Q Consensus 508 ~~~i~~~L~~l~~~gaI~~~~~-~d~~v~~~~d~~~v~~~v~pv~~~e~I~~ti~v~~~~~--~~ 569 (569) |+++++||++||++|+|++|++ ++.+++.++|+++|++.++|++||||||||+++.|+|= ++ T Consensus 509 k~~i~~~L~~l~~~g~I~~~~~~~~~~~~~~~d~v~V~i~v~Pv~~i~~I~vti~~~p~~~~~~~ 573 (581) T protein:vir:10 509 KASAEAALVWLVDNNIIRGYRNLKARQIERQPDVIEVRYEWRPAYPLNYIVVRYSIAPETGDITS 573 (581) T ss_pred HHHHHHHHHHHHhcCcccCCccceeeeeecCCCEEEEEEEEEecccceEEEEEEEEecCCCceEE Confidence 9999999999999999999985 67888899999999999999999999999999999973 33 No 28 >protein:vir:5663 Length: 671 # NCBI annotation: tail sheath protein # Family: family:all:661 # MgeID: mge:119 # MgeName: KVP40 # Cross-refs: genbank:acc:NP_899602;genbank:gi:34419589;genbank:GeneID:2545776 Probab=100.00 E-value=4e-67 Score=384.63 Aligned_cols=546 Identities=14% Similarity=0.105 Sum_probs=305.4 Q ss_pred cceecCceEEEEEcCCCccccCCCCceEEEEeccCCCCCceeEEEcChHHHHHHhcCcchHHHHHHHhhhhhhhccCCce Q lcl|Aclame:pro 9 KKVSRPHTEITVDTSGIGGSSSSSDKTLMLVGSAKGGKPDTVYRFRNYQQAKQVLRSGDLLDAIELAWNASDVNTASAGD 88 (569) Q Consensus 9 ~~~~~PGvyi~~~~~~~~~~~~~~~~~~~~~g~a~~G~~~~~~~i~~~~~~~~~fg~g~l~~~~~~~~~~~~~~~~g~~~ 88 (569) =+|++|||||||.+ +.+++++++|++++|+|.++|||+++|++|+||.||++.||+- .+.-.+.|....+|+|||++ T Consensus 1 ~~~~~Pgvyv~e~~-~~~~i~~v~t~~~~fvG~~~~Gp~~~p~~v~s~~~~~~~fG~~--~~~~~~~~~v~~~f~ngg~~ 77 (671) T protein:vir:56 1 MTLLSPGIENKEIN-LASAIGRAATGRAAMVGKFEWGPAYSITQVTSESDLVTIFGRP--NDYTAASFMTANNFLKYGND 77 (671) T ss_pred CceecCceEEEeec-CcccccccCcccceEEecccCCCCccCEEcCCHHHHHHHcCCc--CCCcchhHHHHHHHHhcCCe Confidence 78999999999996 8899999999999999999999999999999999999999972 22233444555566899999 Q ss_pred EEEEEcCCCccceee-----ccceEEEEecCCcccceeEEEEecCC-CCcceEEEEEecC-C-ceeeecccccceeEE-- Q lcl|Aclame:pro 89 ILAVRVEDAKNATLT-----KGGLTFASTIYGVDANEIQVALEDNN-LTHTKRLTVAFSK-D-GYKKVFDNLGKIFSI-- 158 (569) Q Consensus 89 ~~~~rv~~~~~a~~~-----~~~l~~~a~~~G~~gn~i~v~~~~~~-~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~v-- 158 (569) ||++|+.++..+.+. ...++.++..++.+||.|.+.-..-. ......+...... + ............+.. T Consensus 78 ~~vvrv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~v~~~~ 157 (671) T protein:vir:56 78 LRLVRICDATTAQNATPLYNAVEYTIGASNGCVVGDDITITYSGVGALTAKGKVLEVDAGNNNAASKIFLPSAEIVAAAK 157 (671) T ss_pred EEEEEecCccccccchhhccccccccccCcceeeceeeeeecCcccccccCcceeEEeeeccceeeeeeccceeEEEeee Confidence 999999654332221 22356677777777877766332110 0111111111100 0 000000000000000 Q ss_pred -----------EecCcccceeEEEEecCccceeeeeeecccccc----ccceeeeecc----------------cccccc Q lcl|Aclame:pro 159 -----------QYKGSEAQANFTIAQDSISKKATTLTLNVGSEP----ESTTEVMKYE----------------LGQGVY 207 (569) Q Consensus 159 -----------~~~G~~a~a~~~v~~~~~s~~~~~lt~~~~~~~----~~~~~v~~~~----------------l~~~~~ 207 (569) .+.+......+................+..... ........|. ...+.. T Consensus 158 ~~~~~~~~~~~t~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~g~~g~~ 237 (671) T protein:vir:56 158 SDGNYPSVGTITLQPTQGDIALTNIEIIDTGSVYFPNIELAFDALTAIETEGGALKYADLIEKQGFPRLSARYVGDFGDA 237 (671) T ss_pred ccccccccccccccccccceeeeeecccccceEEEeccccccccccccccccccccchhhhhcccccccccccccccCcc Confidence 000000000000000000000000000000000 0000000000 000000 Q ss_pred ceehh-----hhhhcccccceeEEecccCCcceeccc-ccch-----h----------hccccc-----cceeehhhhh- Q lcl|Aclame:pro 208 SETNV-----LVSAINSLPDWEAKFFPIGDKNLPTDA-LEAV-----T----------KVDVKT-----EAVFVGALAG- 260 (569) Q Consensus 208 ~~~~~-----~~~~i~~~~~~~~~~~~~~~~~~~~~~-~d~~-----~----------~~~~~~-----~~~~~~~~~~- 260 (569) ..... ........+....... +....... .+.. . ...+.. ....+..... T Consensus 238 ~~v~v~~~~~~~~~~a~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~ 314 (671) T protein:vir:56 238 ISVEIINYADYQTAFAFAAGHTLGDI---ELPIYPDGGTRSINLSSYFTFGPSNSNQYAVIVRVSGEVEEAFIVSTNPGD 314 (671) T ss_pred eEEEEecccccccccccccceeeeec---cccccccccccccccceeecccccccccceeEEeecCccceeEEEeecccc Confidence 00000 0000000000000000 00000000 0000 0 000000 0000000000 Q ss_pred -------hhhhh-hccCceEEEEeccCccccccceeeeecCCCCCch-hHHHHHHHHHHhcCc---cEEEecC--CCHH- Q lcl|Aclame:pro 261 -------DIAKQ-LEYNDYVTVAVDATKPVEDFELTNLTGGSDGTAP-ESWANKFPLLANEGG---YYLVPLT--DKQA- 325 (569) Q Consensus 261 -------~~~~~-~~~~~~v~~~~~~~~~~a~~~~~~LtGG~dg~~~-~~~~~~l~~le~~~~---~~i~~~~--~d~~- 325 (569) ..... ........................|.||.|+.+. .++.++++++++.+. +++.++. .++. T Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gg~d~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~ 394 (671) T protein:vir:56 315 KDVNGQSIFIDEYFENSGSAYITAIAEGWKTESGAYNFGGGSDANAGADDWMFGLDMLSDPEVLYTNLVIAGNAAAEEVS 394 (671) T ss_pred cccchhhhhhhhhhcccCceEEEecCcccCCccccccccCccccccchhHHHHHHHhhhhccccceeEEEcCCCCCccch Confidence 00000 0111111111111122222334578899998755 468889998877543 2233221 1111 Q ss_pred -HHHHHHHHHHHHhcCCCeEEEEEcCCC--------CCCHHHHHHHh--------------hhcCCceEEEEeccceec- Q lcl|Aclame:pro 326 -VHSEALAFVKDRTDNGDPMRIIVGGGT--------NETVEESITRA--------------TNLRDPRASLVGFSGTRK- 381 (569) Q Consensus 326 -v~~~l~~~v~~~~~~g~~~~~vv~~~~--------~~~~~~~~~~a--------------~~~n~~~v~~v~~~~~~~- 381 (569) .+....+.+..+.+..+.+++++..+. ..+++++.+.. ..++|.+.++++|++... T Consensus 395 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~p~~~~~d 474 (671) T protein:vir:56 395 IASTVQKYAIDSVGNVRQDCVVFVSPPQSLIVNKQAGTAVANIQGWRTGIDPTNGQAVVDNLNVSTTYAVIDGNYKYQYD 474 (671) T ss_pred hHHHHHHHHHHHHHhhcCCEEEEEeccccccccccccccHHHHHHHhhhccccchhhhhhhccCCcceEEEecCceEEec Confidence 111122223333333455888887553 34556555443 347789999999998643 Q ss_pred cCCcceeeechHHHHHHHHHHhhcCc----hhcCccceeec----cccccccCCHHHHHHHHhcCcEEEEEecCCcceEE Q lcl|Aclame:pro 382 MDDGRLLKLPGYMMASQIAGIASGLE----VGEAITFKHFN----VTSVDRVFESSQLDMLNESGVISIEFVRNRTLTAF 453 (569) Q Consensus 382 ~~~g~~~~~~~~~~aa~vAG~~A~~~----~~~s~T~~~~~----~~~~~~~~t~~e~~~l~~~Gv~~l~~~~~~~~~~~ 453 (569) ...+..+.+|++ +++||++|..+ +++||.|+.+. ..++...+++.|++.|+++|++++++. .+.++ T Consensus 475 ~~~~~~~~~p~s---~~~AGl~Ar~D~~~g~~~span~~~~~i~g~~~~~~~~~~~~~~~Ln~~gIn~i~~~---~~~G~ 548 (671) T protein:vir:56 475 KYNDRNRWVPLA---GDIAGLCAYTDQVSQPWMSPAGFNRGQIKGVNRLAVDLRRAHRDALYQIGINPVVGF---AGQGF 548 (671) T ss_pred ccCCceeEechH---HHHHHHHHHhhccCCcEECcCCceeccccccccceeecChhHHHHHhhCCceEEEEe---cCCeE Confidence 334445566654 88889988887 77899998653 346777899999999999999999764 44579 Q ss_pred EEeeceeccCCCCchhhhhhhHHHHHHHHHHHHHHHHHhcCCcccCChHHHHHHHHHHHHHHHHHHhCCcccCCCc---- Q lcl|Aclame:pro 454 RVVQDVTTYNDKSDPVKNEMSVGEANDFLVSELKIELDNNFIGTKVIDTSASLIKNFIQSFLDNKKRAREIQDYTP---- 529 (569) Q Consensus 454 ri~~~itT~~~~~d~~~~~i~v~R~~d~i~~~i~~~~~~~~iGk~nn~~~~~~v~~~i~~~L~~l~~~gaI~~~~~---- 529 (569) |+|.+.|. ...+..|++|++||++|+|+++|++.. .+|++|||++.+|..|+..|+.||..||++|+|.||.. T Consensus 549 ~~wG~rT~--~~~~~~~~~i~vrR~~~~i~~si~~~~-~~~v~epn~~~~~~~i~~~i~~fL~~l~~~gal~g~~v~~d~ 625 (671) T protein:vir:56 549 VLYGDKTA--TQQASAFDRINVRRLFNLLKKAISDAA-KYRLFELNDEFTRSSFKSEIDAYLTNIQDLGGVYDFRVVCDE 625 (671) T ss_pred EEEcceec--CCCCcccceEehhhHHHHHHHHHHHHH-HHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeEEEEcC Confidence 99999885 234568999999999999999999886 58999999999999999999999999999999999743 Q ss_pred -cccEEecCCCEEEEEEEEEEccceeEEEEEEEEEeeeeeC Q lcl|Aclame:pro 530 -EEVQVVLEGDVASISMTVMPIRSLNKITVQLVYKQQILTA 569 (569) Q Consensus 530 -~d~~v~~~~d~~~v~~~v~pv~~~e~I~~ti~v~~~~~~~ 569 (569) .+.+.+++.++++|++.++|++|+|||+++|..+..-++- T Consensus 626 ~~nt~~~i~~G~~~~~i~~~p~~Pae~I~~~~~~~~~~~~f 666 (671) T protein:vir:56 626 TNNPGSVIDRNEFVASIYVKPAKSINFITLNFVATSTDADF 666 (671) T ss_pred CCCCHHHhhCCeEEEEEEEEecCCcceEEEEEEEeecCcch Confidence 2334567789999999999999999999999855444432 No 29 >protein:vir:7653 Length: 581 # NCBI annotation: gp124 # Family: family:all:1196 # MgeID: mge:148 # MgeName: Bxz1 # Cross-refs: genbank:acc:NP_818197;genbank:gi:29566631;genbank:GeneID:1259809 Probab=100.00 E-value=2e-67 Score=386.25 Aligned_cols=507 Identities=18% Similarity=0.161 Sum_probs=292.1 Q ss_pred CCCccccCcceecCceEEEEEcCCCccccCCCCceEEEEe--------------ccCCCCCceeEEEcChHHHHHHhcCc Q lcl|Aclame:pro 1 MAVEQFPRKKVSRPHTEITVDTSGIGGSSSSSDKTLMLVG--------------SAKGGKPDTVYRFRNYQQAKQVLRSG 66 (569) Q Consensus 1 ma~~~~~~~~~~~PGvyi~~~~~~~~~~~~~~~~~~~~~g--------------~a~~G~~~~~~~i~~~~~~~~~fg~g 66 (569) |+... +.|-.+|+|-+..+++...+..--...+-+.| -..+|+.+++++|+= .| T Consensus 1 ~~~~~---~~~~~~~~~t~~~~~~~~g~~~~~~~~~~i~g~~~g~~g~~~s~r~~p~~~~~~evq~v~~-------~~-- 68 (581) T protein:vir:76 1 MAIDF---SQYQTPGVYTEAVGAPQLGIRSSVPTAVAIFGTAVGYQTYRESIRINPDTGETITTQILAL-------VG-- 68 (581) T ss_pred Ccccc---cccccchhhhhhccccccCcceeeeeeeeecccccccccccceeeecCCCCCCCceEEEEE-------ee-- Confidence 76543 34445566555444432211000000000101 113344444443310 00 Q ss_pred chHHHHHHHhhhhhhhccCCceEEEEEcCCCccc--eeeccceEEEEecCCcccceeEEEEecCCCCcceEEEEEecCCc Q lcl|Aclame:pro 67 DLLDAIELAWNASDVNTASAGDILAVRVEDAKNA--TLTKGGLTFASTIYGVDANEIQVALEDNNLTHTKRLTVAFSKDG 144 (569) Q Consensus 67 ~l~~~~~~~~~~~~~~~~g~~~~~~~rv~~~~~a--~~~~~~l~~~a~~~G~~gn~i~v~~~~~~~~~~~~~~~~~~~~~ 144 (569) .++.. +++-++.+-..-.+.+-.++++.+++.-...++..+++. T Consensus 69 -----------------------------~~t~G~ftLt~~g~tT~~I~~~asa~~v~~AL~~L~~i~~~~v~vt----- 114 (581) T protein:vir:76 69 -----------------------------EPTGGSFKLSLAGEPTGNIPFNATQGQVQSALRALPNVEDDEVTVL----- 114 (581) T ss_pred -----------------------------cCCcceEEEEeCceeccccccCCCHHHHHHHHhhccCCCCceEEEE----- Confidence 00000 000111111111111122222222221111111111111 Q ss_pred eeeecccccceeEEEecCcccceeEEEE-ecCccceeeeeeec-ccc-ccccceee----------------eecccccc Q lcl|Aclame:pro 145 YKKVFDNLGKIFSIQYKGSEAQANFTIA-QDSISKKATTLTLN-VGS-EPESTTEV----------------MKYELGQG 205 (569) Q Consensus 145 ~~~~~~~~~~~~~v~~~G~~a~a~~~v~-~~~~s~~~~~lt~~-~~~-~~~~~~~v----------------~~~~l~~~ 205 (569) ...++.+.|.|.|..+.....+. ..+.....+..... .+. ..++...+ ..|.+.+. T Consensus 115 -----g~~~~~~~V~F~g~~~~~~~~~~~ltg~~~~~~~V~~~~~G~~~~~~~l~~~g~~~~~~~~~~s~~~~~~~l~~~ 189 (581) T protein:vir:76 115 -----GDPGGPWTVTFTKAVAALTKDVTGLTGGDNPDLNIASEQTGVPAMNRALAKKGIKTDTIRVVNPNSGQVYVLGTD 189 (581) T ss_pred -----cCCCceEEEEEcCCccceeEeeeeeecCCcceeEEEEEecCcCCcCceeeeccccccccceeecCCcceeeeccc Confidence 11122333344333222111110 00000000000000 000 00000000 00111100 Q ss_pred c-cceehhhhhhcccccce-eE--EecccC--C--cc--eecccccchhhccccccceeehhhhhhhh------hhhccC Q lcl|Aclame:pro 206 V-YSETNVLVSAINSLPDW-EA--KFFPIG--D--KN--LPTDALEAVTKVDVKTEAVFVGALAGDIA------KQLEYN 269 (569) Q Consensus 206 ~-~~~~~~~~~~i~~~~~~-~~--~~~~~~--~--~~--~~~~~~d~~~~~~~~~~~~~~~~~~~~~~------~~~~~~ 269 (569) . ....+.-...-.+..+. .+ ...+.+ + .. +..+..|. ...+++......+.. ....++ T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~t~~~~~~g~~~~~~~i~~~~~~~~D~------~~~~~v~~~~~~~~~~~~~~~~~~~g~ 263 (581) T protein:vir:76 190 YVVTRVNAGEDGEANTRDDLYTIQRVVDGGHIDPGDIVQLSYRYTDP------NYHEVIRFTDPDDIQDFYGPAFDEAGN 263 (581) T ss_pred ccceeeccCcccceeeeeeeeeeEeecccccccceeEEEEEEEeecC------CccceEEEecccccccceeeehhhcCc Confidence 0 00000000000000000 00 000000 0 00 00111110 000111111111110 111111 Q ss_pred ceEEEEeccCccccccceeeeecCCCCC----chhHHHHHHHHHHhcCccEE-EecCCCHHHHHHHHHHHHHHhcCCCeE Q lcl|Aclame:pro 270 DYVTVAVDATKPVEDFELTNLTGGSDGT----APESWANKFPLLANEGGYYL-VPLTDKQAVHSEALAFVKDRTDNGDPM 344 (569) Q Consensus 270 ~~v~~~~~~~~~~a~~~~~~LtGG~dg~----~~~~~~~~l~~le~~~~~~i-~~~~~d~~v~~~l~~~v~~~~~~g~~~ 344 (569) ..-++......++++.+.+.|+||.|+. ...||.++|++|++++++.| +|++.++++|+++++||++|+++++++ T Consensus 264 ~~~e~~~~~~~~~t~~~~~~l~~gvd~~g~tvt~~dy~~aL~ale~~~~~~ivvp~t~~~~i~a~l~ahv~~~s~~~~~~ 343 (581) T protein:vir:76 264 VQSEITLCAQLAITNGASTILACAVDPEGDTVTMGDYQNALNKFRDEDEIAIIVAGTGAQPIQALVQQHVSAQSNNKYER 343 (581) T ss_pred cccchhhhhheeeccccceEEEeeecCCCCccchHHHHHHHHHHhcCCeEEEEEecCCChHHHHHHHHHHHHHHhccCCc Confidence 1112222233456777888999999974 34689999999999998865 567888999999999999999887766 Q ss_pred EE---EEcCCCCCCHHHHHHHhhhcCCceEEEEeccceec--cCCcceeeechHHHHHHHHHHhhcCchhcCccceeec- Q lcl|Aclame:pro 345 RI---IVGGGTNETVEESITRATNLRDPRASLVGFSGTRK--MDDGRLLKLPGYMMASQIAGIASGLEVGEAITFKHFN- 418 (569) Q Consensus 345 ~~---vv~~~~~~~~~~~~~~a~~~n~~~v~~v~~~~~~~--~~~g~~~~~~~~~~aa~vAG~~A~~~~~~s~T~~~~~- 418 (569) ++ +.++....+.+++++++..+|++|+++++|++... ...++...+|+|++||++||++|+.++++||||++++ T Consensus 344 ra~igv~g~~~~~~~~~~~~~a~~~ns~Rvvlv~p~~~~~~g~~~~~~~~lp~~~~AA~vAG~~a~~~~~~slT~~~i~g 423 (581) T protein:vir:76 344 RAILGMDGSVTPVPSATRIANAQSIKDQRVALISPSSFVYYAPELNREVVLGGQFMAAAVAGKSVSAIAAMPLTRKVIRG 423 (581) T ss_pred eEEEEeeCCCCCchHHHHHHhhcccCCCcEEEEEcCceEeccccCCcceecchhhhhhhHHhhhhccccccCcccccccc Confidence 54 44555666788889999999999999999986543 2345567899999999999999999999999999998 Q ss_pred cccccccCCHHHHHHHHhcCcEEEEEecCCcceEEEEeeceeccCCCCchhhhhhhHHHHHHHHHHHHHHHHH-hcCCcc Q lcl|Aclame:pro 419 VTSVDRVFESSQLDMLNESGVISIEFVRNRTLTAFRVVQDVTTYNDKSDPVKNEMSVGEANDFLVSELKIELD-NNFIGT 497 (569) Q Consensus 419 ~~~~~~~~t~~e~~~l~~~Gv~~l~~~~~~~~~~~ri~~~itT~~~~~d~~~~~i~v~R~~d~i~~~i~~~~~-~~~iGk 497 (569) +.++..+|+++|+++|+++|+++|++.++ +++||+++|||+. +++.|++|++||++|++.+++|+.++ ++|||+ T Consensus 424 ~~~~~~~~s~~e~e~ll~~Gv~~l~~~~~---~~v~Iv~gItT~~--s~~~~k~i~viR~~D~v~~~vr~~~~~~~fiG~ 498 (581) T protein:vir:76 424 FSGPAEVQRDGEKSRESSEGLMVIEKTPR---NLVHVRHGVTTDP--TSLHTREWNIIGQQDVMVYRIRDYLDADGLIGM 498 (581) T ss_pred cccccccCCHHHHHHHHhCCeEEEEEecC---CeEEEEEeeecCC--CCCccceeeehhhhHHHHHHHHHHHhhhcCCCc Confidence 67899999999999999999999997544 4689999999986 46789999999999999999999985 689999 Q ss_pred cCChHHHHHHHHHHHHHHHHHHhCCcccCCCc-cccEEecCCCEEEEEEEEEEccceeEEEEEEEEEeeee--eC Q lcl|Aclame:pro 498 KVIDTSASLIKNFIQSFLDNKKRAREIQDYTP-EEVQVVLEGDVASISMTVMPIRSLNKITVQLVYKQQIL--TA 569 (569) Q Consensus 498 ~nn~~~~~~v~~~i~~~L~~l~~~gaI~~~~~-~d~~v~~~~d~~~v~~~v~pv~~~e~I~~ti~v~~~~~--~~ 569 (569) +|+++.|.+||++|.+||++||++|+|++|++ ++.+++.++|+++|+++++|++||||||||+++.|+|= ++ T Consensus 499 ~n~~~~r~~ik~~i~~~L~~l~~~g~I~g~~~~~~~~~~~~~d~v~V~i~v~Pv~~ie~I~vt~~~~p~~~~~~~ 573 (581) T protein:vir:76 499 PIYDTTIVQVKASAEAALVWLVDNNIIRGYRNLKARQIERQPDVIEVRYEWRPAYPLNYIVVRYSIAPETGDITS 573 (581) T ss_pred ccChHHHHHHHHHHHHHHHHHHhcCcccCcccceeeEEecCCCEEEEEEEEEecccceEEEEEEEEeeCCCceEE Confidence 99999999999999999999999999999986 78889999999999999999999999999999999973 33 No 30 >protein:vir:79092 Length: 477 # NCBI annotation: gp13, phage tail sheath protein # Family: family:all:115 # MgeID: mge:1862 # MgeName: phiE255 # Cross-refs: genbank:acc:YP_001111213;genbank:gi:134288804;genbank:GeneID:4960766 Probab=100.00 E-value=4.3e-59 Score=340.55 Aligned_cols=440 Identities=15% Similarity=0.105 Sum_probs=281.6 Q ss_pred CCCccccCcceecCceEEEEEcCCCccccCCCCceEEEEeccCCCCCceeEEEcChHHHHHHhcC---cchHHHHHHHhh Q lcl|Aclame:pro 1 MAVEQFPRKKVSRPHTEITVDTSGIGGSSSSSDKTLMLVGSAKGGKPDTVYRFRNYQQAKQVLRS---GDLLDAIELAWN 77 (569) Q Consensus 1 ma~~~~~~~~~~~PGvyi~~~~~~~~~~~~~~~~~~~~~g~a~~G~~~~~~~i~~~~~~~~~fg~---g~l~~~~~~~~~ 77 (569) || .|.+|||||+|.+++.+++.++++++.+|||.+++||+|+|++|+||.||.+.||. +.|.++++.+| T Consensus 1 M~-------~~~~pGVyv~E~~~g~~~I~~v~Tsv~~~VG~a~~~p~n~pv~its~~d~~~~g~~~~~~tL~~Av~~~f- 72 (477) T protein:vir:79 1 MA-------ANYLHGVETIEKETGSRPVKVVKSAVIGLIGTAPIGPVNTPVQSLSDVDAAQFGPQLAGFTIPQALDAVY- 72 (477) T ss_pred Cc-------CCCCCCeEEEEecCCcccccccCCceEEEEeecccCCCcccEEEccHHHHHHhcCCCCCCcHHHHHHHHh- Confidence 66 35689999999999999999999999999999999999999999999999875543 56888888877 Q ss_pred hhhhhccCCceEEEEEcCCCccceeeccceEEEEecCCcccceeEEEEecCCCCcceEEEEEecCCceeeecccccceeE Q lcl|Aclame:pro 78 ASDVNTASAGDILAVRVEDAKNATLTKGGLTFASTIYGVDANEIQVALEDNNLTHTKRLTVAFSKDGYKKVFDNLGKIFS 157 (569) Q Consensus 78 ~~~~~~~g~~~~~~~rv~~~~~a~~~~~~l~~~a~~~G~~gn~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (569) .||+++||++|+.++........ ...+..... .... ..... T Consensus 73 -----~ngg~~~~vvrV~~~~~~~~~~a------~~~~~~~~~------------~~~~-------------~~~~~--- 113 (477) T protein:vir:79 73 -----DYGSGTVIVINVLDPAVHKSNAA------SESVTFDAA------------TGRA-------------KLAHP--- 113 (477) T ss_pred -----hcCCceEEEEeccCCcccccccc------ccccccccc------------cccc-------------ccccc--- Confidence 58999999999965432211100 000000000 0000 00000 Q ss_pred EEecCcccceeEEEEecCccceeeeeeeccccccccceeeeeccccccccceehhhhhhcccccceeEEecccCCcceec Q lcl|Aclame:pro 158 IQYKGSEAQANFTIAQDSISKKATTLTLNVGSEPESTTEVMKYELGQGVYSETNVLVSAINSLPDWEAKFFPIGDKNLPT 237 (569) Q Consensus 158 v~~~G~~a~a~~~v~~~~~s~~~~~lt~~~~~~~~~~~~v~~~~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 237 (569) ....+.+..+.... ......+...+..-.... ++.... .+ T Consensus 114 -------~~~~~~v~~~~~~~---~~~~~~~~~~~~~~~~~~-~~~~~~-----------------------~~------ 153 (477) T protein:vir:79 114 -------AAANLVLKNDSGGT---TYTEGTDYAVDLINGVIT-RIKTGT-----------------------IP------ 153 (477) T ss_pred -------ccceeEEeeccccc---ccccCccccccccchhhh-hhhccc-----------------------cc------ Confidence 00000000000000 000000000000000000 000000 00 Q ss_pred ccccchhhccccccceeehhhhhhhhhhhccCceEEEEeccCccccccceeeeecCCCCCchhHHHHHHHHHHhcC---c Q lcl|Aclame:pro 238 DALEAVTKVDVKTEAVFVGALAGDIAKQLEYNDYVTVAVDATKPVEDFELTNLTGGSDGTAPESWANKFPLLANEG---G 314 (569) Q Consensus 238 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~a~~~~~~LtGG~dg~~~~~~~~~l~~le~~~---~ 314 (569) .... .+....+. ..........+.|..+........++|...+... . T Consensus 154 ------------~~~~-----------------~~~~~~~~-~~~~~~~~~~~~g~~~a~~~~tg~~al~~~~~~~~~~~ 203 (477) T protein:vir:79 154 ------------AAAT-----------------AAKATYDY-ADPTKVTAADIIGAVNAAGMRTGMKALKDTYNLYGYFS 203 (477) T ss_pred ------------cccc-----------------eeeceecc-CCcccceeeeecccccccccchhhhhhhhhhhhccccc Confidence 0000 00000000 0000000111222222222222223333332221 1 Q ss_pred cEEEec--CCCHHHHHHHHHHHHHHhcCCCeEEEEEcCCCCCCHHHHHHHh-------hhcCCceEEEEeccceec-cCC Q lcl|Aclame:pro 315 YYLVPL--TDKQAVHSEALAFVKDRTDNGDPMRIIVGGGTNETVEESITRA-------TNLRDPRASLVGFSGTRK-MDD 384 (569) Q Consensus 315 ~~i~~~--~~d~~v~~~l~~~v~~~~~~g~~~~~vv~~~~~~~~~~~~~~a-------~~~n~~~v~~v~~~~~~~-~~~ 384 (569) ..+..+ ..+.++++.+.++|++++ ++++++.+...+++++.... ..|+|+++++++|+.... ..+ T Consensus 204 ~iv~apg~~~~~~v~~~l~~~~~~~~-----~~a~~d~p~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~p~~~~~~~~~ 278 (477) T protein:vir:79 204 KILIAPAYCTQNSVSVELEAMAVQLG-----AIAYIDAPIGTTLAQALAGRGPAGTINFNTSSDRVRLCYPHVKVYDIAT 278 (477) T ss_pred ceeeccccccchhHHHHHHHHHhhcC-----eEEEEecCCCCChHHHhhhhhhccccccccccceEEEEcCeeEEecccC Confidence 122222 346678999999998763 78999888777777665533 347899999999987533 334 Q ss_pred cceeeechHHHHHHHHHHhhcCc----hhcCccceeec-cccccccC------CHHHHHHHHhcCcEEEEEecCCcceEE Q lcl|Aclame:pro 385 GRLLKLPGYMMASQIAGIASGLE----VGEAITFKHFN-VTSVDRVF------ESSQLDMLNESGVISIEFVRNRTLTAF 453 (569) Q Consensus 385 g~~~~~~~~~~aa~vAG~~A~~~----~~~s~T~~~~~-~~~~~~~~------t~~e~~~l~~~Gv~~l~~~~~~~~~~~ 453 (569) +....+|++ +.+||++|..+ +++||.|+++. +.++...+ ++.|++.|+++|+++++.. .+.++ T Consensus 279 ~~~~~~p~s---~~~ag~~a~~d~~~g~~~span~~~~gv~~~~~~~~~~~~~~~~~~~~L~~~~i~~i~~~---~~~G~ 352 (477) T protein:vir:79 279 NAERLEPLS---SRAAGLRARVDLDKGYWWSSSNQQLVGVTGVERPLSAMIDDPQSDVNMLNEQGITTVFSS---YGSGL 352 (477) T ss_pred CceeeechH---HHHHHHHHHhhccCCceEccCCceeecceecccccccccCCChhhHHHHhhCCceEEEEe---cCCcE Confidence 444556654 78888888775 77899999986 55555443 4679999999999999753 44589 Q ss_pred EEeeceeccCCCCchhhhhhhHHHHHHHHHHHHHHHHHhcCCcccCChHHHHHHHHHHHHHHHHHHhCCcccCCCcc--- Q lcl|Aclame:pro 454 RVVQDVTTYNDKSDPVKNEMSVGEANDFLVSELKIELDNNFIGTKVIDTSASLIKNFIQSFLDNKKRAREIQDYTPE--- 530 (569) Q Consensus 454 ri~~~itT~~~~~d~~~~~i~v~R~~d~i~~~i~~~~~~~~iGk~nn~~~~~~v~~~i~~~L~~l~~~gaI~~~~~~--- 530 (569) ++|.++|......++.|+++++||++|+|+++|++.+ .+|++|||+..+|..|+..|+.||.+||++|+|.+|... T Consensus 353 ~~wG~rT~~~~~~~~~~~~i~vrR~~~~i~~~~~~~~-~~~v~e~~~~~~~~~i~~~i~~~l~~l~~~g~l~g~~v~~~~ 431 (477) T protein:vir:79 353 RLWGNRTAAWPTVTHMRNFENVRRTGDVINESLRYFS-QQFVDAPIDQGLIDSLVESVNGFGRKLIGDGALLGFKAWFDP 431 (477) T ss_pred EEEcccccCCCCCCccceeeehhhHHHHHHHHHHHHH-HHhccCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeEEEEec Confidence 9999999877777889999999999999999999987 589999999999999999999999999999999998531 Q ss_pred --ccEEecCCCEEEEEEEEEEccceeEEEEEEEEEeeeeeC Q lcl|Aclame:pro 531 --EVQVVLEGDVASISMTVMPIRSLNKITVQLVYKQQILTA 569 (569) Q Consensus 531 --d~~v~~~~d~~~v~~~v~pv~~~e~I~~ti~v~~~~~~~ 569 (569) +.+.+++++++++++.++|+.|+|||.+++.+.++.++- T Consensus 432 ~~nt~~~i~~G~~~~~i~~~p~~p~e~i~~~~~~~~~~~~~ 472 (477) T protein:vir:79 432 ARNPKEELAAGHLLINYKYTVPPPLERLTYETEITSEYLLT 472 (477) T ss_pred CCCCHHHhhCCeEEEEEEEEecCCceeEEEEEEEechHHhh Confidence 224456789999999999999999999999999988887 No 31 >protein:vir:107865 Length: 477 # NCBI annotation: gp39 # Family: family:all:115 # MgeID: mge:1565 # MgeName: BcepMu # Cross-refs: genbank:acc:YP_024712;genbank:gi:48696949;genbank:GeneID:2845953 Probab=100.00 E-value=3e-59 Score=341.47 Aligned_cols=439 Identities=14% Similarity=0.110 Sum_probs=281.4 Q ss_pred CCCccccCcceecCceEEEEEcCCCccccCCCCceEEEEeccCCCCCceeEEEcChHHHHHHhcC----cchHHHHHHHh Q lcl|Aclame:pro 1 MAVEQFPRKKVSRPHTEITVDTSGIGGSSSSSDKTLMLVGSAKGGKPDTVYRFRNYQQAKQVLRS----GDLLDAIELAW 76 (569) Q Consensus 1 ma~~~~~~~~~~~PGvyi~~~~~~~~~~~~~~~~~~~~~g~a~~G~~~~~~~i~~~~~~~~~fg~----g~l~~~~~~~~ 76 (569) |+ +|.+|||||+|.+++.+++.++++++.+|||.+++||+|+|++|+||.||.. ||+ +.|.+|++.+| T Consensus 1 M~-------~~~~pGVyv~E~~~~~~~i~~v~T~v~~~VG~a~~gp~n~pv~its~~d~~~-~g~~~~~~tL~~Av~~~f 72 (477) T protein:vir:10 1 MA-------ANYLHGVETIEKETGSRPVKVVKSAVIGLIGTAPIGPVNTPVQSLSDVDAAQ-FGPQLAGFTIPQALDAVY 72 (477) T ss_pred Cc-------ccCCCCeEEEEccCCcccccccCCceeEEEecccCCCCCcCEEEccHHHHHH-hccCCCCCcHHHHHHHHH Confidence 44 4568999999999999999999999999999999999999999999999965 654 56888988887 Q ss_pred hhhhhhccCCceEEEEEcCCCccceeeccceEEEEecCCcccceeEEEEecCCCCcceEEEEEecCCceeeeccccccee Q lcl|Aclame:pro 77 NASDVNTASAGDILAVRVEDAKNATLTKGGLTFASTIYGVDANEIQVALEDNNLTHTKRLTVAFSKDGYKKVFDNLGKIF 156 (569) Q Consensus 77 ~~~~~~~~g~~~~~~~rv~~~~~a~~~~~~l~~~a~~~G~~gn~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (569) .||+++||++||.+......+... . .... ...+..... .....+ T Consensus 73 ------~nGg~~~~vVrV~~~~~~~~~~~~------------~-----~~~~-~~~~~~~~~----------~~~~~~-- 116 (477) T protein:vir:10 73 ------DYGSGTVIVINVLDPAVHKSNAAN------------E-----PVTF-DAATGRAKL----------AHPAAA-- 116 (477) T ss_pred ------hccceEEEEEecCccccccccccc------------c-----cccc-ccccceecc----------cccccc-- Confidence 589999999999654332221000 0 0000 000000000 000000 Q ss_pred EEEecCcccceeEEEEecCccceeeeeeeccccccccceeeeeccccccccceehhhhhhcccccceeEEecccCCccee Q lcl|Aclame:pro 157 SIQYKGSEAQANFTIAQDSISKKATTLTLNVGSEPESTTEVMKYELGQGVYSETNVLVSAINSLPDWEAKFFPIGDKNLP 236 (569) Q Consensus 157 ~v~~~G~~a~a~~~v~~~~~s~~~~~lt~~~~~~~~~~~~v~~~~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 236 (569) ...+........ .....+.. ........... ... T Consensus 117 -----------~~~v~~~a~~~~---~~~~~~~~---------~~~~~~~~~~~-------------~~~---------- 150 (477) T protein:vir:10 117 -----------NLVLKNDSGGTT---YAEGTDYA---------VDLINGVITRI-------------KTG---------- 150 (477) T ss_pred -----------cccccccccccc---cccchhhh---------hhhccccceec-------------ccc---------- Confidence 000000000000 00000000 00000000000 000 Q ss_pred cccccchhhccccccceeehhhhhhhhhhhccCceEEEEeccCccccccceeeeecCCCCCchhHHHHHHHHHHhc---- Q lcl|Aclame:pro 237 TDALEAVTKVDVKTEAVFVGALAGDIAKQLEYNDYVTVAVDATKPVEDFELTNLTGGSDGTAPESWANKFPLLANE---- 312 (569) Q Consensus 237 ~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~a~~~~~~LtGG~dg~~~~~~~~~l~~le~~---- 312 (569) ..... ..-+...++. ..........+.|..+.+...+..++|...+.. T Consensus 151 ----------~~~~~-----------------~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~tGl~al~~~~~~~~~~ 202 (477) T protein:vir:10 151 ----------TIPPG-----------------ATAAKATYDY-ADPTKVTAADIIGAVNAAGMRTGMKALKDTYNLYGYF 202 (477) T ss_pred ----------ccccc-----------------ceeeeecccc-ccccccccccccccccccchhhhhhhhhhhhhhcchh Confidence 00000 0000000000 000000111222332322222222233222211 Q ss_pred CccEEEec-CCCHHHHHHHHHHHHHHhcCCCeEEEEEcCCCCCCHHHHHHHhh-------hcCCceEEEEeccceec-cC Q lcl|Aclame:pro 313 GGYYLVPL-TDKQAVHSEALAFVKDRTDNGDPMRIIVGGGTNETVEESITRAT-------NLRDPRASLVGFSGTRK-MD 383 (569) Q Consensus 313 ~~~~i~~~-~~d~~v~~~l~~~v~~~~~~g~~~~~vv~~~~~~~~~~~~~~a~-------~~n~~~v~~v~~~~~~~-~~ 383 (569) .....++. ..+.+++++|.++|++++ ++++++.+...+.++++.... .++|+++++++|++... .. T Consensus 203 ~~~l~apg~~~~~~v~~~l~~~~~~~~-----~~~~~d~p~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~p~~~~~d~~ 277 (477) T protein:vir:10 203 SKILIAPAYCTQNSVSVELEAMAVQLG-----AIAYIDAPIGTTLAQALAGRGPAGTINFNTSSDRVRLCYPHVKVYDTA 277 (477) T ss_pred cccccccccccchhhHHHHHHHHhhCC-----EEEEEecCCCCCHHHHHhhhhhccccccccccceEEEEcCeEEEeccc Confidence 11111222 346789999999998764 788998887777777665433 57899999999987532 34 Q ss_pred CcceeeechHHHHHHHHHHhhcCc----hhcCccceeec-cccccccC------CHHHHHHHHhcCcEEEEEecCCcceE Q lcl|Aclame:pro 384 DGRLLKLPGYMMASQIAGIASGLE----VGEAITFKHFN-VTSVDRVF------ESSQLDMLNESGVISIEFVRNRTLTA 452 (569) Q Consensus 384 ~g~~~~~~~~~~aa~vAG~~A~~~----~~~s~T~~~~~-~~~~~~~~------t~~e~~~l~~~Gv~~l~~~~~~~~~~ 452 (569) ++..+.+|++ +++||++|..+ +++||.|+++. +.++...+ ++.|.+.|+++|+++++.. .+.+ T Consensus 278 ~~~~~~~p~s---~~~ag~~a~~d~~~g~~~span~~~~gi~~~~~~~~~~~~~~~~~~~~L~~~gi~~i~~~---~~~G 351 (477) T protein:vir:10 278 TNAERLEPLS---SRAAGLRARVDLDKGYWWSSSNQQLVGVTGVERPLSAMIDDPQSDVNMLNEQGITTVFSS---YGSG 351 (477) T ss_pred CCceeEEchH---HHHHHHHHHhhhcCCceeccCCceeccccccccccccccCCChhhHHHHhhCCceEEEEe---cCCc Confidence 4455566654 78888888775 77899999986 55655543 4678999999999999653 4458 Q ss_pred EEEeeceeccCCCCchhhhhhhHHHHHHHHHHHHHHHHHhcCCcccCChHHHHHHHHHHHHHHHHHHhCCcccCCCcc-- Q lcl|Aclame:pro 453 FRVVQDVTTYNDKSDPVKNEMSVGEANDFLVSELKIELDNNFIGTKVIDTSASLIKNFIQSFLDNKKRAREIQDYTPE-- 530 (569) Q Consensus 453 ~ri~~~itT~~~~~d~~~~~i~v~R~~d~i~~~i~~~~~~~~iGk~nn~~~~~~v~~~i~~~L~~l~~~gaI~~~~~~-- 530 (569) +++|.+.|....+.++.|+++++||++|+|+++|++.+ .+|++|+|+..+|..++..|+.||..||++|+|.+|... T Consensus 352 ~~~wG~rT~~~~~~~~~~~~~~vrR~~~~i~~~~~~~~-~~~v~~~~~~~~~~~i~~~i~~~l~~l~~~g~l~g~~v~~~ 430 (477) T protein:vir:10 352 LRLWGNRTAAWPTVTHMRNFENVRRTGDVINESLRYFS-QQFVDAPIDQGLIDSLVESVNGFGRKLIGDGALLGFKAWFD 430 (477) T ss_pred EEEEcccccCCCCCCcccceeehhhHHHHHHHHHHHHH-HHhccCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeEEEEe Confidence 99999999877777889999999999999999999987 579999999999999999999999999999999998531 Q ss_pred ---ccEEecCCCEEEEEEEEEEccceeEEEEEEEEEeeeeeC Q lcl|Aclame:pro 531 ---EVQVVLEGDVASISMTVMPIRSLNKITVQLVYKQQILTA 569 (569) Q Consensus 531 ---d~~v~~~~d~~~v~~~v~pv~~~e~I~~ti~v~~~~~~~ 569 (569) +.+.++.++++++++.++|+.|||||.+++++.++.++. T Consensus 431 ~~~nt~~~i~~G~~~~~i~~~p~~p~e~i~~~~~~~~~~~~~ 472 (477) T protein:vir:10 431 PARNPKEELAAGHLLINYKYTVPPPLERLTYETEITSEYLLT 472 (477) T ss_pred cCCCCHHHhhCCeEEEEEEEEecCCcceEEEEEEEcchHHhh Confidence 223356778999999999999999999999999998888 No 32 >protein:vir:102359 Length: 356 # NCBI annotation: XkdK protein # Family: family:all:632 # MgeID: mge:1566 # MgeName: phi CD119 # Cross-refs: genbank:acc:YP_529565;genbank:gi:90592650;genbank:GeneID:3974491 Probab=100.00 E-value=2.4e-59 Score=341.93 Aligned_cols=326 Identities=9% Similarity=0.068 Sum_probs=225.8 Q ss_pred cccccccceeeeeccccccccceehhhhhhcccccceeEEecccCCcceecccccchhhccccccceeehhhhhhhhhhh Q lcl|Aclame:pro 187 VGSEPESTTEVMKYELGQGVYSETNVLVSAINSLPDWEAKFFPIGDKNLPTDALEAVTKVDVKTEAVFVGALAGDIAKQL 266 (569) Q Consensus 187 ~~~~~~~~~~v~~~~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (569) ...-+...+.+ ..-..++.+.+.++..... ..|........+....+... ... T Consensus 1 ~~glp~i~i~f---------------------~~~a~ta~~~g~rGiv~~i-l~d~~~~~~~~~~~~~v~~~-----~~~ 53 (356) T protein:vir:10 1 MAGLVNINIEF---------------------KELATSFIQRSKAGIVAII-LKDTTKMYKELTSEDDIPIS-----LSA 53 (356) T ss_pred CCCCCceeEEE---------------------eecceeeccCCccceEEEE-EecCCcceeEEeccccchhH-----HHH Confidence 00000000000 0011244455555432211 11111000000000001111 111 Q ss_pred ccCceEEEEeccCccccccceeeeecCCCC-CchhHHHHHHHHHHhcCccEEEecCCCHHHHHHHHHHHHHHhcC-CCeE Q lcl|Aclame:pro 267 EYNDYVTVAVDATKPVEDFELTNLTGGSDG-TAPESWANKFPLLANEGGYYLVPLTDKQAVHSEALAFVKDRTDN-GDPM 344 (569) Q Consensus 267 ~~~~~v~~~~~~~~~~a~~~~~~LtGG~dg-~~~~~~~~~l~~le~~~~~~i~~~~~d~~v~~~l~~~v~~~~~~-g~~~ 344 (569) ....|+...+.+ +..+..+...+.++..+ ...++|.++|++||.++|+++++++.++++|+++.+||||||++ |+++ T Consensus 54 ~n~~~i~~~~~g-~~~~~~~~~p~~~~~~~~~t~~~y~~aL~~le~~~fn~l~~~~~d~~~~~~~~a~ikr~r~~~~~~~ 132 (356) T protein:vir:10 54 DNKKYIKYGFVG-ATDNEKVLRPSKVIISTFTEDGKVEDILEELESVEFNYLCMPEAIEAEKTKIVTWIKKIREEESTEA 132 (356) T ss_pred HHHHHHHHHhhc-cccccccccceeeeeecccCchhHHHHHHHhcCccceEEEecCCChHHHHHHHHHHHHHHhcCCcEE Confidence 222344433322 11111111222222111 13468999999999999999999999999999999999999987 4555 Q ss_pred EEEEcCCCCCCHHHHHHHhhhcCCceEEEEeccceeccCCcceeeechHHHHHHHHHHhhcCchhcCccceeeccccccc Q lcl|Aclame:pro 345 RIIVGGGTNETVEESITRATNLRDPRASLVGFSGTRKMDDGRLLKLPGYMMASQIAGIASGLEVGEAITFKHFNVTSVDR 424 (569) Q Consensus 345 ~~vv~~~~~~~~~~~~~~a~~~n~~~v~~v~~~~~~~~~~g~~~~~~~~~~aa~vAG~~A~~~~~~s~T~~~~~~~~~~~ 424 (569) .+|++.. ..|+|+++++.+++.. +| ..+.++++|+|+||++||+++++|+||++++.+++.+ T Consensus 133 ~~V~~~~-------------~aD~EgIInv~n~~~~---~g--~~~t~~~~~~~vAG~~Ag~~~n~S~T~~~~~~~~~~~ 194 (356) T protein:vir:10 133 KAVLANI-------------KADNEAIINFTENVVV---DG--EEITAEKYTTRVASLIASTPNTQSITYAPLDEVESIV 194 (356) T ss_pred EEEecCC-------------CCCCceeEEeecCeEe---cc--eeechhHHHHHHHHHHhccchhccccceecCCccccc Confidence 5555432 2479999999998653 34 3678999999999999999999999999999888888 Q ss_pred cCCHHHHHHHHhcCcEEEEEecCCcceEEEEeeceecc---CCCCchhhhhhhHHHHHHHHHHHHHHHHHhcCCccc-CC Q lcl|Aclame:pro 425 VFESSQLDMLNESGVISIEFVRNRTLTAFRVVQDVTTY---NDKSDPVKNEMSVGEANDFLVSELKIELDNNFIGTK-VI 500 (569) Q Consensus 425 ~~t~~e~~~l~~~Gv~~l~~~~~~~~~~~ri~~~itT~---~~~~d~~~~~i~v~R~~d~i~~~i~~~~~~~~iGk~-nn 500 (569) +|+++|+++++++|.++|+++ ++.+||.++|||+ +.+++++|+||+++|++|+|.+||+++|++.||||. |+ T Consensus 195 ~~t~~e~~~ai~~G~lvl~~d----~~~V~I~~~VNSltt~t~~k~~~f~Kirvvr~~D~i~~Di~~~f~~~yiGKv~N~ 270 (356) T protein:vir:10 195 KIDKASADAKVQAGELILRRL----SGKIRIARGINSLTTLTAEKGEIFQKIKLVDTKDLISKDIKNIYVEKYLRKCPNT 270 (356) T ss_pred cCCHHHHHHHHhCCeEEEEEE----cCeEEEEecCccceecCCCCCcchhhhHHHHHHHHHHHHHHHHHhhccccccCCC Confidence 999999999999999999874 2357899999875 567899999999999999999999999999999996 77 Q ss_pred hHHHHHHHHHHHHHHHHHHhCCcccCCCcccc----------------------EEec--CCCEEEEEEEEEEccceeEE Q lcl|Aclame:pro 501 DTSASLIKNFIQSFLDNKKRAREIQDYTPEEV----------------------QVVL--EGDVASISMTVMPIRSLNKI 556 (569) Q Consensus 501 ~~~~~~v~~~i~~~L~~l~~~gaI~~~~~~d~----------------------~v~~--~~d~~~v~~~v~pv~~~e~I 556 (569) .+.|.+|+++|++||++|+++|+|+.+...++ ++.. .+|.+++++.++|+|+||+| T Consensus 271 ~dgr~~l~~ai~~y~~~L~~~~~I~~~~~~eid~e~q~~~~~~~g~d~~~~~d~~v~~~~~~~~v~~~~~v~~vdamE~i 350 (356) T protein:vir:10 271 YDNKCLFIVAVQSYLTELAKQELIDSNFTVEIDLEKQKEYLEGKKIAVSKMKENEIKEANTGSNGFYLINLKLVDAMEDI 350 (356) T ss_pred HHHHHHHHHHHHHHHHHHHhCCccccCceeEecccchHHHhhhccccccccccceeecccCCcEEEEEEEEEEEeeeeeE Confidence 78899999999999999999999975321111 1111 24779999999999999999 Q ss_pred EEEEEE Q lcl|Aclame:pro 557 TVQLVY 562 (569) Q Consensus 557 ~~ti~v 562 (569) ||++.| T Consensus 351 y~ti~v 356 (356) T protein:vir:10 351 NIRVQM 356 (356) T ss_pred EeEEeC Confidence 999999 No 33 >protein:vir:5711 Length: 396 # NCBI annotation: gpFI # Family: family:all:115 # MgeID: mge:120 # MgeName: L-413C # Cross-refs: genbank:acc:NP_839870;genbank:gi:30065725;genbank:GeneID:1260618 Probab=100.00 E-value=7.1e-52 Score=300.99 Aligned_cols=365 Identities=16% Similarity=0.107 Sum_probs=267.5 Q ss_pred CcceecCceEEEEEcCCCccccCCCCceEEEEeccCCC-----CCceeEEEcChHHHHHHhcC-cchHHHHHHHhhhhhh Q lcl|Aclame:pro 8 RKKVSRPHTEITVDTSGIGGSSSSSDKTLMLVGSAKGG-----KPDTVYRFRNYQQAKQVLRS-GDLLDAIELAWNASDV 81 (569) Q Consensus 8 ~~~~~~PGvyi~~~~~~~~~~~~~~~~~~~~~g~a~~G-----~~~~~~~i~~~~~~~~~fg~-g~l~~~~~~~~~~~~~ 81 (569) +-+|+ |||||++.+++++++..+++++.+|+|.+..+ |.++|++|+++.+|...||. +.|.++++..| T Consensus 1 m~~~~-~GV~v~e~~~g~~~i~~v~tav~~~vg~a~~~d~~~~~~~~pv~i~s~~~~~~~~g~~~tl~~al~~~~----- 74 (396) T protein:vir:57 1 MSDYH-HGVQVLEINDGTRVISTVSTAIVGMVCTASDADAETFPLNKPVLITNVQSAIAKAGKKGTLAASLQAIA----- 74 (396) T ss_pred CCCCC-CceEEEEcCCCcccccccCCceEEEEEeccCCCcccccCccCeEeecchhhhhhcccccchHHHHHHhh----- Confidence 44466 89999999999999999999999999998876 66899999999999999985 55777777665 Q ss_pred hccCCceEEEEEcCCCccceeeccceEEEEecCCcccceeEEEEecCCCCcceEEEEEecCCceeeecccccceeEEEec Q lcl|Aclame:pro 82 NTASAGDILAVRVEDAKNATLTKGGLTFASTIYGVDANEIQVALEDNNLTHTKRLTVAFSKDGYKKVFDNLGKIFSIQYK 161 (569) Q Consensus 82 ~~~g~~~~~~~rv~~~~~a~~~~~~l~~~a~~~G~~gn~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 161 (569) .+|+..||++|+..+....... ....+. T Consensus 75 -~~~~~~~~vv~~~~~~~~~~~~--------------------------~~a~t~------------------------- 102 (396) T protein:vir:57 75 -DQSKPVTVVVRVEDGTGDDEET--------------------------KLAQTV------------------------- 102 (396) T ss_pred -hcCCceeEeeeccccccccccc--------------------------cccccc------------------------- Confidence 5788999998875322211100 000000 Q ss_pred CcccceeEEEEecCccceeeeeeeccccccccceeeeeccccccccceehhhhhhcccccceeEEecccCCcceeccccc Q lcl|Aclame:pro 162 GSEAQANFTIAQDSISKKATTLTLNVGSEPESTTEVMKYELGQGVYSETNVLVSAINSLPDWEAKFFPIGDKNLPTDALE 241 (569) Q Consensus 162 G~~a~a~~~v~~~~~s~~~~~lt~~~~~~~~~~~~v~~~~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~d 241 (569) +.+. +. .+.. +....+ . T Consensus 103 -----~~ii--G~------------~~~~--------------~~~tgl-------------~----------------- 119 (396) T protein:vir:57 103 -----SNII--GT------------TDEN--------------GQYTGL-------------K----------------- 119 (396) T ss_pred -----eeee--ee------------cccc--------------ccchhh-------------h----------------- Confidence 0000 00 0000 000000 0 Q ss_pred chhhccccccceeehhhhhhhhhhhccCceEEEEeccCccccccceeeeecCCCCCchhHHHHHHHHHHhcCccEEEecC Q lcl|Aclame:pro 242 AVTKVDVKTEAVFVGALAGDIAKQLEYNDYVTVAVDATKPVEDFELTNLTGGSDGTAPESWANKFPLLANEGGYYLVPLT 321 (569) Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~a~~~~~~LtGG~dg~~~~~~~~~l~~le~~~~~~i~~~~ 321 (569) + +.. .. +.+.. . + ...+++.. T Consensus 120 a-------------------l~~-~~-~~~~~-~--p-----------------------------------~i~~ap~~ 140 (396) T protein:vir:57 120 A-------------------LMG-AE-SVTGV-K--P-----------------------------------RILGVPGL 140 (396) T ss_pred h-------------------hhh-cc-cceeE-E--e-----------------------------------ccccCccc Confidence 0 000 00 00000 0 0 00111222 Q ss_pred CCHHHHHHHHHHHHHHhcCCCeEEEEEcCCCCCCHHHHHHHhhhcCCceEEEEeccceec-cCCcceeeechHHHHHHHH Q lcl|Aclame:pro 322 DKQAVHSEALAFVKDRTDNGDPMRIIVGGGTNETVEESITRATNLRDPRASLVGFSGTRK-MDDGRLLKLPGYMMASQIA 400 (569) Q Consensus 322 ~d~~v~~~l~~~v~~~~~~g~~~~~vv~~~~~~~~~~~~~~a~~~n~~~v~~v~~~~~~~-~~~g~~~~~~~~~~aa~vA 400 (569) ....+++++.+||++++ +++++..+...+++++++....|++.++++++|++... ..++....+|++ +++| T Consensus 141 ~~~~v~~al~~~~~~~~-----~~~~~d~p~~~~~~~~~~~~~~~~s~~~~~~~p~~~~~d~~~~~~~~~p~s---~~~A 212 (396) T protein:vir:57 141 DTKEVAVALASVCQELN-----AFGYISAWGCKTISEVKAYRQNFSQRELMVIWPDFLAWDTVTSTTATAYAT---ARAL 212 (396) T ss_pred chhHHHHHHHHHhhhCc-----eEEEEcCCCCCCHHHHHHHHhccCCceEEEEcceeeeecccCCceeEEehh---HHHH Confidence 34568888999998763 78899988888999999999999999999999988543 334455566654 7888 Q ss_pred HHhhcCc----hhcCccceeec-cccccccC------CHHHHHHHHhcCcEEEEEecCCcceEEEEeeceeccCCCCchh Q lcl|Aclame:pro 401 GIASGLE----VGEAITFKHFN-VTSVDRVF------ESSQLDMLNESGVISIEFVRNRTLTAFRVVQDVTTYNDKSDPV 469 (569) Q Consensus 401 G~~A~~~----~~~s~T~~~~~-~~~~~~~~------t~~e~~~l~~~Gv~~l~~~~~~~~~~~ri~~~itT~~~~~d~~ 469 (569) |++|..+ +++||+|+++. +.++...+ +..|++.|+++|++++.. +.++|+|.+.|+ +.|+. T Consensus 213 g~~a~~d~~~g~~~spaN~~l~gi~~~~~~~~~~~~~~~~~~~~Ln~~gi~t~~~-----~~G~~~wG~rT~---~~d~~ 284 (396) T protein:vir:57 213 GLRAKIDQEQGWHKTLSNVGVNGVTGISASVFWDLQKPGTDADLLNEAGVTTLVR-----RDGFRFWGNRTC---SDDPL 284 (396) T ss_pred HHHHHhhhccCcEeccCCceeccccccceecccccCCcchhhhhhhhcCcEEEEc-----CCCEEEEccccc---CCCcc Confidence 8888777 67799999986 55554443 567899999999999842 246899999886 45778 Q ss_pred hhhhhHHHHHHHHHHHHHHHHHhcCCcccCChHHHHHHHHHHHHHHHHHHhCCcccCCCcc-----ccEEecCCCEEEEE Q lcl|Aclame:pro 470 KNEMSVGEANDFLVSELKIELDNNFIGTKVIDTSASLIKNFIQSFLDNKKRAREIQDYTPE-----EVQVVLEGDVASIS 544 (569) Q Consensus 470 ~~~i~v~R~~d~i~~~i~~~~~~~~iGk~nn~~~~~~v~~~i~~~L~~l~~~gaI~~~~~~-----d~~v~~~~d~~~v~ 544 (569) |++|++||++|+|+++|++.+ .+|+||+|+..+|..|+..|+.||..||++|+|.||... +.+.++..++++++ T Consensus 285 ~~~i~vrR~~~~i~~~i~~~~-~~~v~e~n~~~~~~~i~~~i~~~l~~l~~~gal~g~~v~~d~~~n~~~~i~~G~~~~~ 363 (396) T protein:vir:57 285 FLFESYTRTAQVLADTMAEAH-MWAIDKPITATLIRDIIDGINAKFRELKNNGYIVDGTCWFSEESNDAETLKAGKLYID 363 (396) T ss_pred cceeehhhHHHHHHHHHHHHH-HHhccCCCCHHHHHHHHHHHHHHHHHHHhCCceeceEEEEecCCCCHHHhhCCeEEEE Confidence 999999999999999999987 589999999999999999999999999999999997532 23345678999999 Q ss_pred EEEEEccceeEEEEEEEEEeeeeeC Q lcl|Aclame:pro 545 MTVMPIRSLNKITVQLVYKQQILTA 569 (569) Q Consensus 545 ~~v~pv~~~e~I~~ti~v~~~~~~~ 569 (569) +.++|+.|+|||.+++.+..+.+++ T Consensus 364 v~~~p~~p~e~I~~~~~~~~~~~~~ 388 (396) T protein:vir:57 364 YDYTPVPPLENLTLRQRITSRYLAS 388 (396) T ss_pred EEEEecCCcceEEEEEEEchHHHHH Confidence 9999999999999999999999998 No 34 >protein:vir:1845 Length: 392 # NCBI annotation: tail sheath protein FI # Family: family:all:115 # MgeID: mge:324 # MgeName: 186 # Cross-refs: genbank:acc:NP_052269;genbank:gi:9634076;genbank:GeneID:1262448 Probab=100.00 E-value=7.6e-52 Score=300.84 Aligned_cols=358 Identities=15% Similarity=0.096 Sum_probs=268.0 Q ss_pred CcceecCceEEEEEcCCCccccCCCCceEEEEeccCCC-----CCceeEEEcChHHHHHHhcC-cchHHHHHHHhhhhhh Q lcl|Aclame:pro 8 RKKVSRPHTEITVDTSGIGGSSSSSDKTLMLVGSAKGG-----KPDTVYRFRNYQQAKQVLRS-GDLLDAIELAWNASDV 81 (569) Q Consensus 8 ~~~~~~PGvyi~~~~~~~~~~~~~~~~~~~~~g~a~~G-----~~~~~~~i~~~~~~~~~fg~-g~l~~~~~~~~~~~~~ 81 (569) +-+|+ |||||++.++|.+++..+++++.+|+|.++.+ |.++|++|+++.++...||. |.+.++++..| T Consensus 1 m~~~~-~Gv~v~e~~~g~~~i~~~~tav~g~vgta~~~~~~~~~~~~p~~its~~~~~~~~g~~gtl~~al~~~~----- 74 (392) T protein:vir:18 1 MSDFH-HGTKVIEINDGTRVISTVATAIVGMVWTASDADAETFPLNEPVLITNVQSAIAKAGKKGTLSASLQAIA----- 74 (392) T ss_pred CCCCC-CCeEEEEcCCCceeeeccCcceeEEEEeccCCCCcccccccceEeechHHHHhhcCCCcchHHHHHHhh----- Confidence 55675 89999999999999999999999999999876 67999999999999999985 45777777766 Q ss_pred hccCCceEEEEEcCCCccceeeccceEEEEecCCcccceeEEEEecCCCCcceEEEEEecCCceeeecccccceeEEEec Q lcl|Aclame:pro 82 NTASAGDILAVRVEDAKNATLTKGGLTFASTIYGVDANEIQVALEDNNLTHTKRLTVAFSKDGYKKVFDNLGKIFSIQYK 161 (569) Q Consensus 82 ~~~g~~~~~~~rv~~~~~a~~~~~~l~~~a~~~G~~gn~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 161 (569) .+|+..|+++++..+...... . .+ T Consensus 75 -~ngg~~~~vv~v~~~~~~~~~-----------------------------~--~t------------------------ 98 (392) T protein:vir:18 75 -DQSKPVTVVVRVAEGTGDDAE-----------------------------A--QT------------------------ 98 (392) T ss_pred -cccCceEEEeccccccccccc-----------------------------c--cc------------------------ Confidence 578888888776321100000 0 00 Q ss_pred CcccceeEEEEecCccceeeeeeeccccccccceeeeeccccccccceehhhhhhcccccceeEEecccCCcceeccccc Q lcl|Aclame:pro 162 GSEAQANFTIAQDSISKKATTLTLNVGSEPESTTEVMKYELGQGVYSETNVLVSAINSLPDWEAKFFPIGDKNLPTDALE 241 (569) Q Consensus 162 G~~a~a~~~v~~~~~s~~~~~lt~~~~~~~~~~~~v~~~~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~d 241 (569) .++ T Consensus 99 -----------~~d------------------------------------------------------------------ 101 (392) T protein:vir:18 99 -----------TSN------------------------------------------------------------------ 101 (392) T ss_pred -----------hhh------------------------------------------------------------------ Confidence 000 Q ss_pred chhhccccccceeehhhhhhhhhhhccCceEEEEeccCccccccceeeeecCCCCCchhHHHHHHHHHHhc----CccEE Q lcl|Aclame:pro 242 AVTKVDVKTEAVFVGALAGDIAKQLEYNDYVTVAVDATKPVEDFELTNLTGGSDGTAPESWANKFPLLANE----GGYYL 317 (569) Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~a~~~~~~LtGG~dg~~~~~~~~~l~~le~~----~~~~i 317 (569) +.|+.+.+.......+|...+.. ....+ T Consensus 102 ------------------------------------------------liG~~~~~~~~tg~~al~~~~~~~~~~p~il~ 133 (392) T protein:vir:18 102 ------------------------------------------------IIGGTDENGKYTGIKALLTAEAVTGVKPRILG 133 (392) T ss_pred ------------------------------------------------heecccccchhhhHHHHHhhhhhhceeehhcc Confidence 00000000000000000000000 01122 Q ss_pred EecCCCHHHHHHHHHHHHHHhcCCCeEEEEEcCCCCCCHHHHHHHhhhcCCceEEEEeccceecc-CCcceeeechHHHH Q lcl|Aclame:pro 318 VPLTDKQAVHSEALAFVKDRTDNGDPMRIIVGGGTNETVEESITRATNLRDPRASLVGFSGTRKM-DDGRLLKLPGYMMA 396 (569) Q Consensus 318 ~~~~~d~~v~~~l~~~v~~~~~~g~~~~~vv~~~~~~~~~~~~~~a~~~n~~~v~~v~~~~~~~~-~~g~~~~~~~~~~a 396 (569) ++..+++.++..+.++|++++ +++++++++..+++++++....++|.++++++|++.... ..+....+|++ T Consensus 134 ap~~~~~~v~~~l~~~~~~~~-----~~~~~d~~~~~~~~~a~~~~~~~~s~~~~~~~p~~~~~d~~~~~~~~~p~s--- 205 (392) T protein:vir:18 134 VPGLDTQEVATALASVCISLR-----AFGYVSAWGCKTISEAMAYRENFSQRELMVIWPDFLAWDTTANATATAYAT--- 205 (392) T ss_pred cCccchHHHHHHHHHHHhhcC-----cEEEEecCCCCCHHHHHHHHhhccCceEEEEeCceeeecccCCceEEechH--- Confidence 233346778899999998763 688899888899999999999999999999999976432 23444556654 Q ss_pred HHHHHHhhcCc----hhcCccceeec-ccccccc------CCHHHHHHHHhcCcEEEEEecCCcceEEEEeeceeccCCC Q lcl|Aclame:pro 397 SQIAGIASGLE----VGEAITFKHFN-VTSVDRV------FESSQLDMLNESGVISIEFVRNRTLTAFRVVQDVTTYNDK 465 (569) Q Consensus 397 a~vAG~~A~~~----~~~s~T~~~~~-~~~~~~~------~t~~e~~~l~~~Gv~~l~~~~~~~~~~~ri~~~itT~~~~ 465 (569) +++||++|..+ +++||+|+++. +.++... ++..|.+.|+++|++++. + +.++|+|.++|+ + T Consensus 206 ~~~AG~~a~~d~~~g~~~spaN~~l~gi~~~~~~~~~~~~~~~~~~~~Ln~~gI~t~~--~---~~G~~~wG~rT~---~ 277 (392) T protein:vir:18 206 ARALGLRAYIDQTIGWHKTLSNVGVQGVTGISASVFWDLQASGTDADLLNEAGVTTLV--R---KDGFRFWGNRTC---S 277 (392) T ss_pred HHHHHHHHhhhccCCceEccCCceeeceeecceecccccCCCcchhhhhhhcCceEEE--c---CCCEEEEccccc---C Confidence 78888888776 77899999986 5555444 356788999999999984 2 246899999987 4 Q ss_pred CchhhhhhhHHHHHHHHHHHHHHHHHhcCCcccCChHHHHHHHHHHHHHHHHHHhCCcccCCCcc-----ccEEecCCCE Q lcl|Aclame:pro 466 SDPVKNEMSVGEANDFLVSELKIELDNNFIGTKVIDTSASLIKNFIQSFLDNKKRAREIQDYTPE-----EVQVVLEGDV 540 (569) Q Consensus 466 ~d~~~~~i~v~R~~d~i~~~i~~~~~~~~iGk~nn~~~~~~v~~~i~~~L~~l~~~gaI~~~~~~-----d~~v~~~~d~ 540 (569) .|+.|++|++||++|+|+++|++.+ .+|+||||+..+|..|+..|+.||.+||++|+|.+|... +.+.++..++ T Consensus 278 ~d~~~~~i~~rR~~~~i~~~i~~~~-~~~v~e~n~~~~~~~i~~~i~~~L~~l~~~gal~g~~v~~d~~~nt~~~i~~G~ 356 (392) T protein:vir:18 278 DDPLFLFENYTRTAQVLADTMAEAH-MWAVDKPITASLIRDIVDGINAKFRELKSNGYIVDGECWFDEESNDKETLKAGK 356 (392) T ss_pred CCcccceeehhhHHHHHHHHHHHHH-HHhccCCCCHHHHHHHHHHHHHHHHHHHhcCcccceEEEEecCCCCHHHhhCCe Confidence 5778999999999999999999986 589999999999999999999999999999999997531 2234567899 Q ss_pred EEEEEEEEEccceeEEEEEEEEEeeeeeC Q lcl|Aclame:pro 541 ASISMTVMPIRSLNKITVQLVYKQQILTA 569 (569) Q Consensus 541 ~~v~~~v~pv~~~e~I~~ti~v~~~~~~~ 569 (569) +++++.++|+.|+|||.+++.+.++.+++ T Consensus 357 ~~~~v~~~p~~p~e~I~~~~~~~~~~~~~ 385 (392) T protein:vir:18 357 LYIDYDYTPVPPLESLTLRQRITDKYLVN 385 (392) T ss_pred EEEEEEEEecCCcceEEEEEEEchHHHHH Confidence 99999999999999999999999999987 No 35 >protein:vir:6079 Length: 396 # NCBI annotation: gpFI # Family: family:all:115 # MgeID: mge:126 # MgeName: WPhi # Cross-refs: genbank:acc:NP_878220;genbank:gi:33438919;genbank:GeneID:1457754 Probab=100.00 E-value=1.9e-51 Score=298.66 Aligned_cols=361 Identities=15% Similarity=0.082 Sum_probs=267.0 Q ss_pred CcceecCceEEEEEcCCCccccCCCCceEEEEeccCCC-----CCceeEEEcChHHHHHHhcC-cchHHHHHHHhhhhhh Q lcl|Aclame:pro 8 RKKVSRPHTEITVDTSGIGGSSSSSDKTLMLVGSAKGG-----KPDTVYRFRNYQQAKQVLRS-GDLLDAIELAWNASDV 81 (569) Q Consensus 8 ~~~~~~PGvyi~~~~~~~~~~~~~~~~~~~~~g~a~~G-----~~~~~~~i~~~~~~~~~fg~-g~l~~~~~~~~~~~~~ 81 (569) +-.|+ |||||++.+++++++..+++++.+|+|.+... |.++|++|+++.++...||. +.|.++++..| T Consensus 1 m~~~~-~Gv~v~e~~~~~~~v~~~~tav~~fvGta~~~~~~~~p~~~p~~v~s~~~~~~~~g~~~tl~~a~~~~~----- 74 (396) T protein:vir:60 1 MSDYH-HGVQVLEINEGTRVISTVSTAIVGMVCTASDADAEIFPLNKPVLITNVQSAIAKAGKKGTLAASLQAIA----- 74 (396) T ss_pred CCCCC-CCeEEEEcCCCcccccccCceeEEEEecccccccccccCccCeEeechHHHHHhhcCcchhHHHHHHHh----- Confidence 44565 99999999999999999999999999998554 77899999999999999995 45777777766 Q ss_pred hccCCceEEEEEcCCCccceeeccceEEEEecCCcccceeEEEEecCCCCcceEEEEEecCCceeeecccccceeEEEec Q lcl|Aclame:pro 82 NTASAGDILAVRVEDAKNATLTKGGLTFASTIYGVDANEIQVALEDNNLTHTKRLTVAFSKDGYKKVFDNLGKIFSIQYK 161 (569) Q Consensus 82 ~~~g~~~~~~~rv~~~~~a~~~~~~l~~~a~~~G~~gn~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 161 (569) .+|+..++++|+..+...... .. . T Consensus 75 -~~gg~~~~vv~~~~~~~~~~~----------------------------~~----------------------~----- 98 (396) T protein:vir:60 75 -DQSKPVTVVVRVEDGTGEDEE----------------------------TK----------------------L----- 98 (396) T ss_pred -hccCceEEEEecccccccccc----------------------------cc----------------------c----- Confidence 588999999888432111000 00 0 Q ss_pred CcccceeEEEEecCccceeeeeeeccccccccceeeeeccccccccceehhhhhhcccccceeEEecccCCcceeccccc Q lcl|Aclame:pro 162 GSEAQANFTIAQDSISKKATTLTLNVGSEPESTTEVMKYELGQGVYSETNVLVSAINSLPDWEAKFFPIGDKNLPTDALE 241 (569) Q Consensus 162 G~~a~a~~~v~~~~~s~~~~~lt~~~~~~~~~~~~v~~~~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~d 241 (569) ....... ....+.. +. . T Consensus 99 --------~~~~~~~-------~~~~d~~--------------~~-------------~--------------------- 115 (396) T protein:vir:60 99 --------AQTVSNI-------IGTTDEN--------------GQ-------------Y--------------------- 115 (396) T ss_pred --------ccccccc-------ccccccc--------------cc-------------c--------------------- Confidence 0000000 0000000 00 0 Q ss_pred chhhccccccceeehhhhhhhhhhhccCceEEEEeccCccccccceeeeecCCCCCchhHHHHHHHHHHh----cCccEE Q lcl|Aclame:pro 242 AVTKVDVKTEAVFVGALAGDIAKQLEYNDYVTVAVDATKPVEDFELTNLTGGSDGTAPESWANKFPLLAN----EGGYYL 317 (569) Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~a~~~~~~LtGG~dg~~~~~~~~~l~~le~----~~~~~i 317 (569) ...++|...+. .....+ T Consensus 116 -----------------------------------------------------------tg~~al~~~~~~~~~~~~il~ 136 (396) T protein:vir:60 116 -----------------------------------------------------------TGLKALLAAESVTGVKPRILG 136 (396) T ss_pred -----------------------------------------------------------cchhhhhhcccceeeeeeecc Confidence 00000000000 000112 Q ss_pred EecCCCHHHHHHHHHHHHHHhcCCCeEEEEEcCCCCCCHHHHHHHhhhcCCceEEEEeccceecc-CCcceeeechHHHH Q lcl|Aclame:pro 318 VPLTDKQAVHSEALAFVKDRTDNGDPMRIIVGGGTNETVEESITRATNLRDPRASLVGFSGTRKM-DDGRLLKLPGYMMA 396 (569) Q Consensus 318 ~~~~~d~~v~~~l~~~v~~~~~~g~~~~~vv~~~~~~~~~~~~~~a~~~n~~~v~~v~~~~~~~~-~~g~~~~~~~~~~a 396 (569) .+...++.++.++.+||++++ ++++++.+...+++++++....+++.++++++|++.... ..+....+|++ T Consensus 137 ap~~~~~~v~~al~~~~~~~~-----~~~i~d~p~~~~~~~a~~~~~~~~s~~~~~~~p~~~~~d~~~~~~~~~p~s--- 208 (396) T protein:vir:60 137 VPGLDTKEVAVALASVCQKLR-----AFGYISAWGCKTISEVKAYRQNFSQRELMVIWPDFLAWDTVASTTATAYAT--- 208 (396) T ss_pred ccccccHHHHHHHHHHhccCC-----eEEEEeCCCCCCHHHHHHHHhhcCCceEEEEeCceeeecccCCceeEEchh--- Confidence 233345678899999997763 788999888889999999999999999999999986433 23444556654 Q ss_pred HHHHHHhhcCc----hhcCccceeec-cccccc------cCCHHHHHHHHhcCcEEEEEecCCcceEEEEeeceeccCCC Q lcl|Aclame:pro 397 SQIAGIASGLE----VGEAITFKHFN-VTSVDR------VFESSQLDMLNESGVISIEFVRNRTLTAFRVVQDVTTYNDK 465 (569) Q Consensus 397 a~vAG~~A~~~----~~~s~T~~~~~-~~~~~~------~~t~~e~~~l~~~Gv~~l~~~~~~~~~~~ri~~~itT~~~~ 465 (569) +++||++|..+ +.+||+|+.+. +.++.. .++..|++.|+++|++++.. +.++|+|.+.|+ + T Consensus 209 ~~~AG~~a~~d~~~g~~~spaN~~l~gi~~~~~~~~~~~~~~~~~~~~Ln~~gI~~~~~-----~~G~~~wG~rT~---~ 280 (396) T protein:vir:60 209 ARALGLRAKIDQEQGWHKTLSNVGVNGVTGISASVFWDLQESGTDADLLNESGVTTLIR-----RDGFRFWGNRTC---S 280 (396) T ss_pred HHHHHHHHHhhhccCcEeCcCCceecceeeceeecccccCCCcchhhhhhhcCcEEEEc-----CCCEEEEccccc---C Confidence 78888888877 66799999986 445443 34678899999999999832 346899999886 4 Q ss_pred CchhhhhhhHHHHHHHHHHHHHHHHHhcCCcccCChHHHHHHHHHHHHHHHHHHhCCcccCCCcc-----ccEEecCCCE Q lcl|Aclame:pro 466 SDPVKNEMSVGEANDFLVSELKIELDNNFIGTKVIDTSASLIKNFIQSFLDNKKRAREIQDYTPE-----EVQVVLEGDV 540 (569) Q Consensus 466 ~d~~~~~i~v~R~~d~i~~~i~~~~~~~~iGk~nn~~~~~~v~~~i~~~L~~l~~~gaI~~~~~~-----d~~v~~~~d~ 540 (569) .|+.|++|++||++|+|+++|++.+ .+|+||||+..+|..|+..|+.||..||++|+|.|+..+ +.+.++.+++ T Consensus 281 ~d~~~~~i~~rR~~~~i~~~i~~~~-~~~v~e~n~~~~~~~i~~~i~~~l~~l~~~gal~g~~~~~d~~~nt~~~i~~G~ 359 (396) T protein:vir:60 281 DDPLFLFENYTRTAQVLADTMAEAH-MWAVDKPITATLIRDIVDGINAKFRELKTNGYIVDATCWFSEESNDAETLKAGK 359 (396) T ss_pred CCcccceeehhhHHHHHHHHHHHHH-HHhccCCCCHHHHHHHHHHHHHHHHHHHhCCceeceEEEEecCCCCHHHhhCCE Confidence 4778999999999999999999987 579999999999999999999999999999999997532 1233567899 Q ss_pred EEEEEEEEEccceeEEEEEEEEEeeeeeC Q lcl|Aclame:pro 541 ASISMTVMPIRSLNKITVQLVYKQQILTA 569 (569) Q Consensus 541 ~~v~~~v~pv~~~e~I~~ti~v~~~~~~~ 569 (569) +++++.++|+.|+|||.+++++.++.+++ T Consensus 360 ~~~~i~~~p~~pae~I~~~~~~~~~~~~~ 388 (396) T protein:vir:60 360 LYIDYDYTPVPPLENLTLRQRITDKYLAN 388 (396) T ss_pred EEEEEEEEecCCcceEEEEEEEchHHHHH Confidence 99999999999999999999999998888 No 36 >protein:vir:79181 Length: 390 # NCBI annotation: gp30, phage tail sheath protein # Family: family:all:115 # MgeID: mge:1866 # MgeName: phiE202 # Cross-refs: genbank:acc:YP_001111061;genbank:gi:134288772;genbank:GeneID:4960700 Probab=100.00 E-value=1.6e-51 Score=299.10 Aligned_cols=360 Identities=15% Similarity=0.111 Sum_probs=265.6 Q ss_pred CCCccccCcceecCceEEEEEcCCCccccCCCCceEEEEeccCCC-----CCceeEEEcChHHHHHHhcC-cchHHHHHH Q lcl|Aclame:pro 1 MAVEQFPRKKVSRPHTEITVDTSGIGGSSSSSDKTLMLVGSAKGG-----KPDTVYRFRNYQQAKQVLRS-GDLLDAIEL 74 (569) Q Consensus 1 ma~~~~~~~~~~~PGvyi~~~~~~~~~~~~~~~~~~~~~g~a~~G-----~~~~~~~i~~~~~~~~~fg~-g~l~~~~~~ 74 (569) || .|.+|||||++..++.++++.+++++.+|+|.+..+ |.++|++|+|+.++...||. +-|.++++. T Consensus 1 M~-------~~~~~Gv~v~e~~~~~~~i~~~~tav~~~vg~a~dad~~~~p~n~pv~its~~~~~~~~g~~~tL~~al~~ 73 (390) T protein:vir:79 1 MP-------QDYHHGVRVIEINEGGRPIRSVSTAVLGVVCTAADADASAFPLNTPVLLTNVVAALGKAGKKGTLRRTLDA 73 (390) T ss_pred Cc-------cccCCCeEEEEcCCCcccccccCCceeEEEEecCCCCccccccccceEeecHHHHHHhcCCCccchhhhhh Confidence 44 466899999999999999999999999999999877 78999999999999999996 457788877 Q ss_pred HhhhhhhhccCCceEEEEEcCCCccceeeccceEEEEecCCcccceeEEEEecCCCCcceEEEEEecCCceeeecccccc Q lcl|Aclame:pro 75 AWNASDVNTASAGDILAVRVEDAKNATLTKGGLTFASTIYGVDANEIQVALEDNNLTHTKRLTVAFSKDGYKKVFDNLGK 154 (569) Q Consensus 75 ~~~~~~~~~~g~~~~~~~rv~~~~~a~~~~~~l~~~a~~~G~~gn~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (569) .| .+|++.||++|+..+.....+. . . T Consensus 74 ~~------~~~~~~~~vv~v~~~~~~~~~~----------------------------~--------------------~ 99 (390) T protein:vir:79 74 IG------KQTKPLTVVVRVAEGKDADETT----------------------------S--------------------N 99 (390) T ss_pred hc------ccccceEEEEeecccccccccc----------------------------c--------------------e Confidence 66 5899999999985322111100 0 0 Q ss_pred eeEEEecCcccceeEEEEecCccceeeeeeeccccccccceeeeeccccccccceehhhhhhcccccceeEEecccCCcc Q lcl|Aclame:pro 155 IFSIQYKGSEAQANFTIAQDSISKKATTLTLNVGSEPESTTEVMKYELGQGVYSETNVLVSAINSLPDWEAKFFPIGDKN 234 (569) Q Consensus 155 ~~~v~~~G~~a~a~~~v~~~~~s~~~~~lt~~~~~~~~~~~~v~~~~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 234 (569) .. | . .+... . .++.+ .. T Consensus 100 ~i-----g-----------~------------~~~~~--~--------~tgl~-----al-------------------- 116 (390) T protein:vir:79 100 VI-----G-----------T------------VTPDG--K--------YTGIK-----AL-------------------- 116 (390) T ss_pred ee-----e-----------c------------ccccc--c--------chhhh-----hh-------------------- Confidence 00 0 0 00000 0 00000 00 Q ss_pred eecccccchhhccccccceeehhhhhhhhhhhccCceEEEEeccCccccccceeeeecCCCCCchhHHHHHHHHHHhcCc Q lcl|Aclame:pro 235 LPTDALEAVTKVDVKTEAVFVGALAGDIAKQLEYNDYVTVAVDATKPVEDFELTNLTGGSDGTAPESWANKFPLLANEGG 314 (569) Q Consensus 235 ~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~a~~~~~~LtGG~dg~~~~~~~~~l~~le~~~~ 314 (569) . +....+..... T Consensus 117 ---------~-----------------------------------------------------------~~~~~~~~~p~ 128 (390) T protein:vir:79 117 ---------L-----------------------------------------------------------AAQGALGVKPR 128 (390) T ss_pred ---------h-----------------------------------------------------------hhhhhhccccc Confidence 0 00000000000 Q ss_pred cEEEecCCCHHHHHHHHHHHHHHhcCCCeEEEEEcCCCCCCHHHHHHHhhhcCCceEEEEeccceecc-CCcceeeechH Q lcl|Aclame:pro 315 YYLVPLTDKQAVHSEALAFVKDRTDNGDPMRIIVGGGTNETVEESITRATNLRDPRASLVGFSGTRKM-DDGRLLKLPGY 393 (569) Q Consensus 315 ~~i~~~~~d~~v~~~l~~~v~~~~~~g~~~~~vv~~~~~~~~~~~~~~a~~~n~~~v~~v~~~~~~~~-~~g~~~~~~~~ 393 (569) ..+.+..++..+++.+..||+++ +++++++.+...+.+++++....|++.++++++|+..... ..+....+|++ T Consensus 129 il~ap~~~~~~v~~~l~~~a~~~-----~~~ai~D~p~~~t~~~a~~~~~~~~s~~~~~~~p~~~~~d~~~~~~~~~p~s 203 (390) T protein:vir:79 129 ILAAPGLDTQPVAAALAATAQSL-----RAMAYVSASGCKTKEEAAAYRRQFGQREIMVIWPDWLGWDDTTNSTAVIPAP 203 (390) T ss_pred cccCCcccchHHHHHHHHhhhhc-----ceEEEEEccCCCCHHHHHHHhcCCCCceEEEEcCceeecccccCceeEeehH Confidence 01112223356777888888765 3789999888888999999999999999999999876432 23344555554 Q ss_pred HHHHHHHHHhhcCc----hhcCccceeec-cccccccCCH------HHHHHHHhcCcEEEEEecCCcceEEEEeeceecc Q lcl|Aclame:pro 394 MMASQIAGIASGLE----VGEAITFKHFN-VTSVDRVFES------SQLDMLNESGVISIEFVRNRTLTAFRVVQDVTTY 462 (569) Q Consensus 394 ~~aa~vAG~~A~~~----~~~s~T~~~~~-~~~~~~~~t~------~e~~~l~~~Gv~~l~~~~~~~~~~~ri~~~itT~ 462 (569) +++||++|+.+ +++||+|+++. +.++...++. .|.+.|+++|++++.. +.++|+|.+.|+ T Consensus 204 ---~~~Ag~~a~~D~~~g~~~spsN~~i~gi~~~~~~~~~~~~~~~~~a~~Ln~~gi~t~~~-----~~G~~~wG~rT~- 274 (390) T protein:vir:79 204 ---AIAAGLRAKIDNDIGWHKTISNVVVNGVSGISADVSWDLQDPATDAGYLNEHEVTTLVN-----RNGFRFWGERTC- 274 (390) T ss_pred ---HHHHHHHHhhhccCCcEEccCCceeeccceeeeeccccccccchhhhhhhhcCcEEEEc-----CCCEEEEecccc- Confidence 78888888777 67899999986 5566554443 4556899999999842 346899999986 Q ss_pred CCCCchhhhhhhHHHHHHHHHHHHHHHHHhcCCcccCChHHHHHHHHHHHHHHHHHHhCCcccCCCc-----cccEEecC Q lcl|Aclame:pro 463 NDKSDPVKNEMSVGEANDFLVSELKIELDNNFIGTKVIDTSASLIKNFIQSFLDNKKRAREIQDYTP-----EEVQVVLE 537 (569) Q Consensus 463 ~~~~d~~~~~i~v~R~~d~i~~~i~~~~~~~~iGk~nn~~~~~~v~~~i~~~L~~l~~~gaI~~~~~-----~d~~v~~~ 537 (569) +.|+.|+++++||++|+|+++|++.+ .+|++|||+..+|..|+..++.||..||++|+|.||.. .+.+.++. T Consensus 275 --~~d~~~~~i~vrR~~~~i~~~i~~~~-~~~v~e~~~~~~~~~i~~~i~~~L~~l~~~gal~g~~v~~d~~~nt~~~i~ 351 (390) T protein:vir:79 275 --SDDPKFAFENYTRTAQVAADSIAEAQ-MPVVDGPLNPSLARDIVESINGWFRQQVANGYLIGGSAWIDPEPNTADILA 351 (390) T ss_pred --CCCcccceeeehhhHHHHHHHHHHHH-HHhccCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeEEEEecCCCCHHHhh Confidence 45778999999999999999999987 58999999999999999999999999999999999753 12334567 Q ss_pred CCEEEEEEEEEEccceeEEEEEEEEEeeeeeC Q lcl|Aclame:pro 538 GDVASISMTVMPIRSLNKITVQLVYKQQILTA 569 (569) Q Consensus 538 ~d~~~v~~~v~pv~~~e~I~~ti~v~~~~~~~ 569 (569) ++++++++.++|+.|+|||.+++.+.++.++. T Consensus 352 ~G~~~~~i~~~p~~p~e~i~~~~~~~~~~~~~ 383 (390) T protein:vir:79 352 SGKAYIDYDYTPVPPLENLVLRQRITDRFLAD 383 (390) T ss_pred CCEEEEEEEEEecCCcceEEEEEEEchHHHHH Confidence 89999999999999999999999999999886 No 37 >protein:vir:103993 Length: 390 # NCBI annotation: phage tail sheath protein # Family: family:all:115 # MgeID: mge:1665 # MgeName: phi52237 # Cross-refs: genbank:acc:YP_293729;genbank:gi:72537699;genbank:GeneID:3608123 Probab=100.00 E-value=1.4e-51 Score=299.41 Aligned_cols=360 Identities=16% Similarity=0.114 Sum_probs=267.6 Q ss_pred CCCccccCcceecCceEEEEEcCCCccccCCCCceEEEEeccCCC-----CCceeEEEcChHHHHHHhcC-cchHHHHHH Q lcl|Aclame:pro 1 MAVEQFPRKKVSRPHTEITVDTSGIGGSSSSSDKTLMLVGSAKGG-----KPDTVYRFRNYQQAKQVLRS-GDLLDAIEL 74 (569) Q Consensus 1 ma~~~~~~~~~~~PGvyi~~~~~~~~~~~~~~~~~~~~~g~a~~G-----~~~~~~~i~~~~~~~~~fg~-g~l~~~~~~ 74 (569) || .|.+|||||++...+++++..+++.+.+|+|.++.+ |.++|++++++.++...||. |-|.++++. T Consensus 1 M~-------~~~~~Gv~v~e~~~g~~~i~~~~tav~g~vg~a~~ad~~~~pln~pv~i~s~~~~~~~~g~~gtL~~al~~ 73 (390) T protein:vir:10 1 MP-------QDYHHGVRVIEINEGGRPIRSVSTAVLGVVCTAADADASAFPLNTPVLLTNVVAALGKAGKKGTLRRTLDA 73 (390) T ss_pred Cc-------ccccCCeEEEEcCCCcccccccCcceeEEEEcccCcCccccccccceEeccHHHHHhhcCCCceehhhhhh Confidence 65 356899999999999999999999999999998766 78999999999999999995 567888877 Q ss_pred HhhhhhhhccCCceEEEEEcCCCccceeeccceEEEEecCCcccceeEEEEecCCCCcceEEEEEecCCceeeecccccc Q lcl|Aclame:pro 75 AWNASDVNTASAGDILAVRVEDAKNATLTKGGLTFASTIYGVDANEIQVALEDNNLTHTKRLTVAFSKDGYKKVFDNLGK 154 (569) Q Consensus 75 ~~~~~~~~~~g~~~~~~~rv~~~~~a~~~~~~l~~~a~~~G~~gn~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (569) .| .+|++.||++|+..+.....+... .++. T Consensus 74 ~~------~~gg~~~~vv~v~~~~~~~~~~~~--------------------------------------------~ig~ 103 (390) T protein:vir:10 74 IG------KQTKPLTVVVRVAEGKDADETTSN--------------------------------------------VIGT 103 (390) T ss_pred hc------cccCceEEEEEecccccccccccc--------------------------------------------cccc Confidence 66 589999999998543222111000 0000 Q ss_pred eeEEEecCcccceeEEEEecCccceeeeeeeccccccccceeeeeccccccccceehhhhhhcccccceeEEecccCCcc Q lcl|Aclame:pro 155 IFSIQYKGSEAQANFTIAQDSISKKATTLTLNVGSEPESTTEVMKYELGQGVYSETNVLVSAINSLPDWEAKFFPIGDKN 234 (569) Q Consensus 155 ~~~v~~~G~~a~a~~~v~~~~~s~~~~~lt~~~~~~~~~~~~v~~~~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 234 (569) .. .. + .. ++. +...... + T Consensus 104 ~~------------------~~-----------~-~~------------tg~-----~al~~~~--~------------- 121 (390) T protein:vir:10 104 VT------------------PD-----------G-KY------------TGI-----KALLAAQ--G------------- 121 (390) T ss_pred cc------------------cc-----------c-cc------------chh-----hhhhhhh--h------------- Confidence 00 00 0 00 000 0000000 0 Q ss_pred eecccccchhhccccccceeehhhhhhhhhhhccCceEEEEeccCccccccceeeeecCCCCCchhHHHHHHHHHHhcCc Q lcl|Aclame:pro 235 LPTDALEAVTKVDVKTEAVFVGALAGDIAKQLEYNDYVTVAVDATKPVEDFELTNLTGGSDGTAPESWANKFPLLANEGG 314 (569) Q Consensus 235 ~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~a~~~~~~LtGG~dg~~~~~~~~~l~~le~~~~ 314 (569) . .. ..+ . T Consensus 122 -----------------------------------~-~~--~~p-----------------------------------~ 128 (390) T protein:vir:10 122 -----------------------------------A-LG--VKP-----------------------------------R 128 (390) T ss_pred -----------------------------------h-hc--cee-----------------------------------h Confidence 0 00 000 0 Q ss_pred cEEEecCCCHHHHHHHHHHHHHHhcCCCeEEEEEcCCCCCCHHHHHHHhhhcCCceEEEEeccceecc-CCcceeeechH Q lcl|Aclame:pro 315 YYLVPLTDKQAVHSEALAFVKDRTDNGDPMRIIVGGGTNETVEESITRATNLRDPRASLVGFSGTRKM-DDGRLLKLPGY 393 (569) Q Consensus 315 ~~i~~~~~d~~v~~~l~~~v~~~~~~g~~~~~vv~~~~~~~~~~~~~~a~~~n~~~v~~v~~~~~~~~-~~g~~~~~~~~ 393 (569) ..+.+..+..+++..+.++|++++ ++++++.+...+.+++++....|++++.++++|++.... ..+....+|++ T Consensus 129 il~ap~~~~~~v~~~l~~~a~~~~-----~~aivD~p~~~t~~~a~~~~~~~~s~~~~~~~p~~~~~d~~~~~~~~~p~s 203 (390) T protein:vir:10 129 ILAAPGLDTQPVAAALAATAQSLR-----AMAYVSASGCKTKEEAAAYRKQFGQREIMVIWPDWLGWDDTTNSTAVIPAP 203 (390) T ss_pred hhcccccchHHHHHHHHHhhcccc-----eEEEEecCCCCCHHHHHHHhhccCCceEEEEcCceEeecccCCcccccchH Confidence 001111223467788888887663 688999888889999999999999999999999985432 23334456654 Q ss_pred HHHHHHHHHhhcCc----hhcCccceeec-cccccccCCHH------HHHHHHhcCcEEEEEecCCcceEEEEeeceecc Q lcl|Aclame:pro 394 MMASQIAGIASGLE----VGEAITFKHFN-VTSVDRVFESS------QLDMLNESGVISIEFVRNRTLTAFRVVQDVTTY 462 (569) Q Consensus 394 ~~aa~vAG~~A~~~----~~~s~T~~~~~-~~~~~~~~t~~------e~~~l~~~Gv~~l~~~~~~~~~~~ri~~~itT~ 462 (569) +++||++|..+ +++||+|+.+. +.++...++.. |.+.|+++|++++.. +.++|+|...|+ T Consensus 204 ---~~~Agl~a~~D~~~g~~~spaN~~l~gi~~~~~~~~~~~~~~~~~~~~ln~~gi~t~~~-----~~G~~~wG~rT~- 274 (390) T protein:vir:10 204 ---AIAAGLRAKIDNDIGWHKTISNVVVNGVSGISADVSWDLQDPATDAGYLNEHEVTTLVN-----RNGFRFWGERTC- 274 (390) T ss_pred ---HHHHHHHHHhhcCCCcEECcCCceeeceeecceecccccccccchhhhhhhcCcEEEEc-----CCCEEEEccccc- Confidence 78888888777 67899999996 66666655544 446889999999842 246899999886 Q ss_pred CCCCchhhhhhhHHHHHHHHHHHHHHHHHhcCCcccCChHHHHHHHHHHHHHHHHHHhCCcccCCCc-----cccEEecC Q lcl|Aclame:pro 463 NDKSDPVKNEMSVGEANDFLVSELKIELDNNFIGTKVIDTSASLIKNFIQSFLDNKKRAREIQDYTP-----EEVQVVLE 537 (569) Q Consensus 463 ~~~~d~~~~~i~v~R~~d~i~~~i~~~~~~~~iGk~nn~~~~~~v~~~i~~~L~~l~~~gaI~~~~~-----~d~~v~~~ 537 (569) +.|+.|++|++||++|+|+++|++.+ .+|+||||+..+|..|+..++.||..||++|+|.||.. .+.+-++. T Consensus 275 --s~d~~~~~i~~rR~~~~i~~~i~~~~-~~~v~e~n~~~~~~~i~~~i~~~L~~l~~~g~l~g~~v~~d~~~nt~~~i~ 351 (390) T protein:vir:10 275 --SDDPKFAFENYTRTAQVAGDSIAEAQ-MPVVDGPLNPSLARDIVESINGWFRQQVANGYLIGGSAWIDPEPNTADILA 351 (390) T ss_pred --CCCcccceeehhhHHHHHHHHHHHHH-HHhccCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeEEEEccCCCCHHHhh Confidence 45788999999999999999999987 48999999999999999999999999999999999853 12344567 Q ss_pred CCEEEEEEEEEEccceeEEEEEEEEEeeeeeC Q lcl|Aclame:pro 538 GDVASISMTVMPIRSLNKITVQLVYKQQILTA 569 (569) Q Consensus 538 ~d~~~v~~~v~pv~~~e~I~~ti~v~~~~~~~ 569 (569) ++++++++.++|+.|+|||.+++++.++.++. T Consensus 352 ~G~~~~~v~~~p~~pae~I~~~~~~~~~~~~~ 383 (390) T protein:vir:10 352 SGKAYIDYDYTPVPPLENLVLRQRITDRFLAD 383 (390) T ss_pred CCeEEEEEEEEecCCcceEEEEEEEchHHHHH Confidence 89999999999999999999999999998887 No 38 >protein:vir:78206 Length: 390 # NCBI annotation: gp33, phage tail sheath protein # Family: family:all:115 # MgeID: mge:1848 # MgeName: phiE12-2 # Cross-refs: genbank:acc:YP_001111183;genbank:gi:134288694;genbank:GeneID:4960666 Probab=100.00 E-value=1.4e-51 Score=299.41 Aligned_cols=360 Identities=16% Similarity=0.114 Sum_probs=267.6 Q ss_pred CCCccccCcceecCceEEEEEcCCCccccCCCCceEEEEeccCCC-----CCceeEEEcChHHHHHHhcC-cchHHHHHH Q lcl|Aclame:pro 1 MAVEQFPRKKVSRPHTEITVDTSGIGGSSSSSDKTLMLVGSAKGG-----KPDTVYRFRNYQQAKQVLRS-GDLLDAIEL 74 (569) Q Consensus 1 ma~~~~~~~~~~~PGvyi~~~~~~~~~~~~~~~~~~~~~g~a~~G-----~~~~~~~i~~~~~~~~~fg~-g~l~~~~~~ 74 (569) || .|.+|||||++...+++++..+++.+.+|+|.++.+ |.++|++++++.++...||. |-|.++++. T Consensus 1 M~-------~~~~~Gv~v~e~~~g~~~i~~~~tav~g~vg~a~~ad~~~~pln~pv~i~s~~~~~~~~g~~gtL~~al~~ 73 (390) T protein:vir:78 1 MP-------QDYHHGVRVIEINEGGRPIRSVSTAVLGVVCTAADADASAFPLNTPVLLTNVVAALGKAGKKGTLRRTLDA 73 (390) T ss_pred Cc-------ccccCCeEEEEcCCCcccccccCcceeEEEEcccCcCccccccccceEeccHHHHHhhcCCCceehhhhhh Confidence 65 356899999999999999999999999999998766 78999999999999999995 567888877 Q ss_pred HhhhhhhhccCCceEEEEEcCCCccceeeccceEEEEecCCcccceeEEEEecCCCCcceEEEEEecCCceeeecccccc Q lcl|Aclame:pro 75 AWNASDVNTASAGDILAVRVEDAKNATLTKGGLTFASTIYGVDANEIQVALEDNNLTHTKRLTVAFSKDGYKKVFDNLGK 154 (569) Q Consensus 75 ~~~~~~~~~~g~~~~~~~rv~~~~~a~~~~~~l~~~a~~~G~~gn~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (569) .| .+|++.||++|+..+.....+... .++. T Consensus 74 ~~------~~gg~~~~vv~v~~~~~~~~~~~~--------------------------------------------~ig~ 103 (390) T protein:vir:78 74 IG------KQTKPLTVVVRVAEGKDADETTSN--------------------------------------------VIGT 103 (390) T ss_pred hc------cccCceEEEEEecccccccccccc--------------------------------------------cccc Confidence 66 589999999998543222111000 0000 Q ss_pred eeEEEecCcccceeEEEEecCccceeeeeeeccccccccceeeeeccccccccceehhhhhhcccccceeEEecccCCcc Q lcl|Aclame:pro 155 IFSIQYKGSEAQANFTIAQDSISKKATTLTLNVGSEPESTTEVMKYELGQGVYSETNVLVSAINSLPDWEAKFFPIGDKN 234 (569) Q Consensus 155 ~~~v~~~G~~a~a~~~v~~~~~s~~~~~lt~~~~~~~~~~~~v~~~~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 234 (569) .. .. + .. ++. +...... + T Consensus 104 ~~------------------~~-----------~-~~------------tg~-----~al~~~~--~------------- 121 (390) T protein:vir:78 104 VT------------------PD-----------G-KY------------TGI-----KALLAAQ--G------------- 121 (390) T ss_pred cc------------------cc-----------c-cc------------chh-----hhhhhhh--h------------- Confidence 00 00 0 00 000 0000000 0 Q ss_pred eecccccchhhccccccceeehhhhhhhhhhhccCceEEEEeccCccccccceeeeecCCCCCchhHHHHHHHHHHhcCc Q lcl|Aclame:pro 235 LPTDALEAVTKVDVKTEAVFVGALAGDIAKQLEYNDYVTVAVDATKPVEDFELTNLTGGSDGTAPESWANKFPLLANEGG 314 (569) Q Consensus 235 ~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~a~~~~~~LtGG~dg~~~~~~~~~l~~le~~~~ 314 (569) . .. ..+ . T Consensus 122 -----------------------------------~-~~--~~p-----------------------------------~ 128 (390) T protein:vir:78 122 -----------------------------------A-LG--VKP-----------------------------------R 128 (390) T ss_pred -----------------------------------h-hc--cee-----------------------------------h Confidence 0 00 000 0 Q ss_pred cEEEecCCCHHHHHHHHHHHHHHhcCCCeEEEEEcCCCCCCHHHHHHHhhhcCCceEEEEeccceecc-CCcceeeechH Q lcl|Aclame:pro 315 YYLVPLTDKQAVHSEALAFVKDRTDNGDPMRIIVGGGTNETVEESITRATNLRDPRASLVGFSGTRKM-DDGRLLKLPGY 393 (569) Q Consensus 315 ~~i~~~~~d~~v~~~l~~~v~~~~~~g~~~~~vv~~~~~~~~~~~~~~a~~~n~~~v~~v~~~~~~~~-~~g~~~~~~~~ 393 (569) ..+.+..+..+++..+.++|++++ ++++++.+...+.+++++....|++++.++++|++.... ..+....+|++ T Consensus 129 il~ap~~~~~~v~~~l~~~a~~~~-----~~aivD~p~~~t~~~a~~~~~~~~s~~~~~~~p~~~~~d~~~~~~~~~p~s 203 (390) T protein:vir:78 129 ILAAPGLDTQPVAAALAATAQSLR-----AMAYVSASGCKTKEEAAAYRKQFGQREIMVIWPDWLGWDDTTNSTAVIPAP 203 (390) T ss_pred hhcccccchHHHHHHHHHhhcccc-----eEEEEecCCCCCHHHHHHHhhccCCceEEEEcCceEeecccCCcccccchH Confidence 001111223467788888887663 688999888889999999999999999999999985432 23334456654 Q ss_pred HHHHHHHHHhhcCc----hhcCccceeec-cccccccCCHH------HHHHHHhcCcEEEEEecCCcceEEEEeeceecc Q lcl|Aclame:pro 394 MMASQIAGIASGLE----VGEAITFKHFN-VTSVDRVFESS------QLDMLNESGVISIEFVRNRTLTAFRVVQDVTTY 462 (569) Q Consensus 394 ~~aa~vAG~~A~~~----~~~s~T~~~~~-~~~~~~~~t~~------e~~~l~~~Gv~~l~~~~~~~~~~~ri~~~itT~ 462 (569) +++||++|..+ +++||+|+.+. +.++...++.. |.+.|+++|++++.. +.++|+|...|+ T Consensus 204 ---~~~Agl~a~~D~~~g~~~spaN~~l~gi~~~~~~~~~~~~~~~~~~~~ln~~gi~t~~~-----~~G~~~wG~rT~- 274 (390) T protein:vir:78 204 ---AIAAGLRAKIDNDIGWHKTISNVVVNGVSGISADVSWDLQDPATDAGYLNEHEVTTLVN-----RNGFRFWGERTC- 274 (390) T ss_pred ---HHHHHHHHHhhcCCCcEECcCCceeeceeecceecccccccccchhhhhhhcCcEEEEc-----CCCEEEEccccc- Confidence 78888888777 67899999996 66666655544 446889999999842 246899999886 Q ss_pred CCCCchhhhhhhHHHHHHHHHHHHHHHHHhcCCcccCChHHHHHHHHHHHHHHHHHHhCCcccCCCc-----cccEEecC Q lcl|Aclame:pro 463 NDKSDPVKNEMSVGEANDFLVSELKIELDNNFIGTKVIDTSASLIKNFIQSFLDNKKRAREIQDYTP-----EEVQVVLE 537 (569) Q Consensus 463 ~~~~d~~~~~i~v~R~~d~i~~~i~~~~~~~~iGk~nn~~~~~~v~~~i~~~L~~l~~~gaI~~~~~-----~d~~v~~~ 537 (569) +.|+.|++|++||++|+|+++|++.+ .+|+||||+..+|..|+..++.||..||++|+|.||.. .+.+-++. T Consensus 275 --s~d~~~~~i~~rR~~~~i~~~i~~~~-~~~v~e~n~~~~~~~i~~~i~~~L~~l~~~g~l~g~~v~~d~~~nt~~~i~ 351 (390) T protein:vir:78 275 --SDDPKFAFENYTRTAQVAGDSIAEAQ-MPVVDGPLNPSLARDIVESINGWFRQQVANGYLIGGSAWIDPEPNTADILA 351 (390) T ss_pred --CCCcccceeehhhHHHHHHHHHHHHH-HHhccCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeEEEEccCCCCHHHhh Confidence 45788999999999999999999987 48999999999999999999999999999999999853 12344567 Q ss_pred CCEEEEEEEEEEccceeEEEEEEEEEeeeeeC Q lcl|Aclame:pro 538 GDVASISMTVMPIRSLNKITVQLVYKQQILTA 569 (569) Q Consensus 538 ~d~~~v~~~v~pv~~~e~I~~ti~v~~~~~~~ 569 (569) ++++++++.++|+.|+|||.+++++.++.++. T Consensus 352 ~G~~~~~v~~~p~~pae~I~~~~~~~~~~~~~ 383 (390) T protein:vir:78 352 SGKAYIDYDYTPVPPLENLVLRQRITDRFLAD 383 (390) T ss_pred CCeEEEEEEEEecCCcceEEEEEEEchHHHHH Confidence 89999999999999999999999999998887 No 39 >protein:vir:79141 Length: 391 # NCBI annotation: major tail seath protein gpFI # Family: family:all:115 # MgeID: mge:1863 # MgeName: RSA1 # Cross-refs: genbank:acc:YP_001165276;genbank:gi:145708101;genbank:GeneID:5247152 Probab=100.00 E-value=2e-51 Score=298.55 Aligned_cols=356 Identities=14% Similarity=0.077 Sum_probs=265.7 Q ss_pred CCCccccCcceecCceEEEEEcCCCccccCCCCceEEEEeccC-----CCCCceeEEEcChHHHHHHhcC-cchHHHHHH Q lcl|Aclame:pro 1 MAVEQFPRKKVSRPHTEITVDTSGIGGSSSSSDKTLMLVGSAK-----GGKPDTVYRFRNYQQAKQVLRS-GDLLDAIEL 74 (569) Q Consensus 1 ma~~~~~~~~~~~PGvyi~~~~~~~~~~~~~~~~~~~~~g~a~-----~G~~~~~~~i~~~~~~~~~fg~-g~l~~~~~~ 74 (569) |+ .+| +|||||++.+++++++.++++.+.+|+|.++ .+|.++|+++++++|+...||. |.|.++++. T Consensus 1 M~------~~~-~pGv~v~e~~~~~~~i~~~~tav~~~vg~a~~a~~~~~p~n~pv~iss~~~~~~~~g~~gtl~~al~~ 73 (391) T protein:vir:79 1 MP------TDY-HHGVRVVELNDGTRPIRTIETAVAGIVCTADDADAATFPLDTPVLLTNPQAYIGKAGDKGTLAHTLDA 73 (391) T ss_pred CC------CCC-CCCeEEEECCCCcccccccCCceEEEEeecccccccccccccCEEeccHHHHHHhcCCccccchhhhh Confidence 65 334 8999999999999999999999999999986 6788999999999999999996 456777766 Q ss_pred HhhhhhhhccCCceEEEEEcCCCccceeeccceEEEEecCCcccceeEEEEecCCCCcceEEEEEecCCceeeecccccc Q lcl|Aclame:pro 75 AWNASDVNTASAGDILAVRVEDAKNATLTKGGLTFASTIYGVDANEIQVALEDNNLTHTKRLTVAFSKDGYKKVFDNLGK 154 (569) Q Consensus 75 ~~~~~~~~~~g~~~~~~~rv~~~~~a~~~~~~l~~~a~~~G~~gn~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (569) .| .+|+..||++++........+. T Consensus 74 ~~------~~gg~~~~vv~~~~~~~~~~~~-------------------------------------------------- 97 (391) T protein:vir:79 74 IT------DQTNPLTVVVRVAGGASEAETT-------------------------------------------------- 97 (391) T ss_pred hh------cccccceeeecccccccccccc-------------------------------------------------- Confidence 65 5788889988874211110000 Q ss_pred eeEEEecCcccceeEEEEecCccceeeeeeeccccccccceeeeeccccccccceehhhhhhcccccceeEEecccCCcc Q lcl|Aclame:pro 155 IFSIQYKGSEAQANFTIAQDSISKKATTLTLNVGSEPESTTEVMKYELGQGVYSETNVLVSAINSLPDWEAKFFPIGDKN 234 (569) Q Consensus 155 ~~~v~~~G~~a~a~~~v~~~~~s~~~~~lt~~~~~~~~~~~~v~~~~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 234 (569) ..+....+.. +..+ T Consensus 98 --------------------------~~~~g~~~~~--------------~~~t-------------------------- 111 (391) T protein:vir:79 98 --------------------------SNLIGTTNAA--------------GRYT-------------------------- 111 (391) T ss_pred --------------------------ccccccccch--------------hhhH-------------------------- Confidence 0000000000 0000 Q ss_pred eecccccchhhccccccceeehhhhhhhhhhhccCceEEEEeccCccccccceeeeecCCCCCchhHHHHHHHHHHh--- Q lcl|Aclame:pro 235 LPTDALEAVTKVDVKTEAVFVGALAGDIAKQLEYNDYVTVAVDATKPVEDFELTNLTGGSDGTAPESWANKFPLLAN--- 311 (569) Q Consensus 235 ~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~a~~~~~~LtGG~dg~~~~~~~~~l~~le~--- 311 (569) ..++|...+. T Consensus 112 -------------------------------------------------------------------Gl~~l~~~~~~~~ 124 (391) T protein:vir:79 112 -------------------------------------------------------------------GMKALLTARNRFG 124 (391) T ss_pred -------------------------------------------------------------------HHhhhhhhhhhhc Confidence 0000000000 Q ss_pred -cCccEEEecCCCHHHHHHHHHHHHHHhcCCCeEEEEEcCCCCCCHHHHHHHhhhcCCceEEEEeccceec-cCCcceee Q lcl|Aclame:pro 312 -EGGYYLVPLTDKQAVHSEALAFVKDRTDNGDPMRIIVGGGTNETVEESITRATNLRDPRASLVGFSGTRK-MDDGRLLK 389 (569) Q Consensus 312 -~~~~~i~~~~~d~~v~~~l~~~v~~~~~~g~~~~~vv~~~~~~~~~~~~~~a~~~n~~~v~~v~~~~~~~-~~~g~~~~ 389 (569) ..-..+.+..+..+++.++.++|++++ .+++++.+...+.++++.....+++.++++++|+.... ..++.... T Consensus 125 ~~p~~l~~p~~~~~~v~~al~~~~~~~~-----~~ai~d~p~~~t~~~a~~~~~~~~s~~~a~~~P~~~~~d~~~~~~~~ 199 (391) T protein:vir:79 125 VAPRILAVPGLDSLPVGTELVTIAQKLR-----AFAYLSAYGCQTKEEAVAYRSNFGQREAMVMWPDFVGWDTAANAETT 199 (391) T ss_pred ccchhhcCCccchhHHHHHHHHHHhhcC-----cEEEEECCCCCCHHHHHHHHhccCCceeEEecceeeeecCcCCceee Confidence 000011233344568888888887654 67888888888999999999999999999999987543 23344455 Q ss_pred echHHHHHHHHHHhhcCc----hhcCccceeec-cccccccCCH------HHHHHHHhcCcEEEEEecCCcceEEEEeec Q lcl|Aclame:pro 390 LPGYMMASQIAGIASGLE----VGEAITFKHFN-VTSVDRVFES------SQLDMLNESGVISIEFVRNRTLTAFRVVQD 458 (569) Q Consensus 390 ~~~~~~aa~vAG~~A~~~----~~~s~T~~~~~-~~~~~~~~t~------~e~~~l~~~Gv~~l~~~~~~~~~~~ri~~~ 458 (569) +|++ +.+||++|..+ +++||.|+.+. +.++...++. .|.+.|+++|++++.+ +.++|+|.+ T Consensus 200 ~p~s---~~~AG~~a~~D~~~g~~~spaN~~l~gi~~~~~~~~~~~~~~~~~~~~Ln~~~I~t~~~-----~~G~~~wG~ 271 (391) T protein:vir:79 200 LWAT---ARAVGLRAKIDNDTGWHKTLSNVAVGGVTGLSRDVFWDLQDPATDAGYLNANEVTTLVH-----RDGYRFWGS 271 (391) T ss_pred echH---HHHHHHHHHhhhcccceeccCCceehhhhccccccccccccccchhhhhhhcCceEEEC-----CCcEEEEcc Confidence 6654 78888888887 77899999985 6677665543 3567899999999842 346899999 Q ss_pred eeccCCCCchhhhhhhHHHHHHHHHHHHHHHHHhcCCcccCChHHHHHHHHHHHHHHHHHHhCCcccCCCcc-----ccE Q lcl|Aclame:pro 459 VTTYNDKSDPVKNEMSVGEANDFLVSELKIELDNNFIGTKVIDTSASLIKNFIQSFLDNKKRAREIQDYTPE-----EVQ 533 (569) Q Consensus 459 itT~~~~~d~~~~~i~v~R~~d~i~~~i~~~~~~~~iGk~nn~~~~~~v~~~i~~~L~~l~~~gaI~~~~~~-----d~~ 533 (569) .|+ +.|+.|++|++||++|+|+++|++.+ .+|++|||++.+|..|+..|+.||..||++|+|.|+... +.+ T Consensus 272 rT~---~~d~~~~~i~~rR~~~~i~~~i~~~~-~~~v~epn~~~~~~~i~~~i~~~l~~l~~~g~l~g~~v~~~~~~nt~ 347 (391) T protein:vir:79 272 RTC---SADPLFAFENYTRTAQVLADTMAEAH-MWANDLPMTPTLVRDLLEGINAKLRMLTRNGYLLGGAAWFDADANSK 347 (391) T ss_pred ccc---CCCcccceeehhhHHHHHHHHHHHHH-HHhccCCCCHHHHHHHHHHHHHHHHHHHhCCceeceEEEEecCCCCH Confidence 987 34788999999999999999999987 589999999999999999999999999999999998532 234 Q ss_pred EecCCCEEEEEEEEEEccceeEEEEEEEEEeeeeeC Q lcl|Aclame:pro 534 VVLEGDVASISMTVMPIRSLNKITVQLVYKQQILTA 569 (569) Q Consensus 534 v~~~~d~~~v~~~v~pv~~~e~I~~ti~v~~~~~~~ 569 (569) .++++++++++++++|+.|+|||.+++.+..+.++. T Consensus 348 ~~i~~G~~~~~i~~~p~~p~e~i~~~~~~~~~~~~~ 383 (391) T protein:vir:79 348 DTLKAGQLAIDYDYTPVPPLENLTFRQRITDRYLMQ 383 (391) T ss_pred HHhhCCEEEEEEEEEecCCcceEEEEEEEchHHHHH Confidence 456789999999999999999999999999999875 No 40 >protein:vir:2035 Length: 396 # NCBI annotation: gpFI # Family: family:all:115 # MgeID: mge:315 # MgeName: P2 # Cross-refs: genbank:acc:NP_046778;genbank:gi:9630349;genbank:GeneID:1261516 Probab=100.00 E-value=4.2e-51 Score=296.75 Aligned_cols=365 Identities=16% Similarity=0.108 Sum_probs=266.6 Q ss_pred CcceecCceEEEEEcCCCccccCCCCceEEEEeccCCC-----CCceeEEEcChHHHHHHhcCc-chHHHHHHHhhhhhh Q lcl|Aclame:pro 8 RKKVSRPHTEITVDTSGIGGSSSSSDKTLMLVGSAKGG-----KPDTVYRFRNYQQAKQVLRSG-DLLDAIELAWNASDV 81 (569) Q Consensus 8 ~~~~~~PGvyi~~~~~~~~~~~~~~~~~~~~~g~a~~G-----~~~~~~~i~~~~~~~~~fg~g-~l~~~~~~~~~~~~~ 81 (569) +-.|. |||||++.++|++++..+++++.+|+|.+..+ |.++|++|+++.++...||.+ .|.++++.+| T Consensus 1 m~~~~-~GV~v~e~~~g~~~i~~v~tav~~~vg~a~~a~~~~~~l~~pvlvts~~~~~~~~g~~~tL~~al~~~~----- 74 (396) T protein:vir:20 1 MSDYH-HGVQVLEINEGTRVISTVSTAIVGMVCTASDADAETFPLNKPVLITNVQSAISKAGKKGTLAASLQAIA----- 74 (396) T ss_pred CCCCC-CCeEEEEcCCCcceeeecCCceeEEEeeeccCCCccccCccCEEeechHHHHhhcccccchhhhhhhhh----- Confidence 44574 99999999999999999999999999998665 568999999999999999964 4778877766 Q ss_pred hccCCceEEEEEcCCCccceeeccceEEEEecCCcccceeEEEEecCCCCcceEEEEEecCCceeeecccccceeEEEec Q lcl|Aclame:pro 82 NTASAGDILAVRVEDAKNATLTKGGLTFASTIYGVDANEIQVALEDNNLTHTKRLTVAFSKDGYKKVFDNLGKIFSIQYK 161 (569) Q Consensus 82 ~~~g~~~~~~~rv~~~~~a~~~~~~l~~~a~~~G~~gn~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 161 (569) .+|+..++++++..+..... ......+. T Consensus 75 -~ngg~~~~v~~~~~~~~~~~--------------------------~~~~a~t~------------------------- 102 (396) T protein:vir:20 75 -DQSKPVTVVMRVEDGTGDDE--------------------------ETKLAQTV------------------------- 102 (396) T ss_pred -ccCceeEEEEeccccccccc--------------------------cccccccc------------------------- Confidence 57899999888743211000 00000000 Q ss_pred CcccceeEEEEecCccceeeeeeeccccccccceeeeeccccccccceehhhhhhcccccceeEEecccCCcceeccccc Q lcl|Aclame:pro 162 GSEAQANFTIAQDSISKKATTLTLNVGSEPESTTEVMKYELGQGVYSETNVLVSAINSLPDWEAKFFPIGDKNLPTDALE 241 (569) Q Consensus 162 G~~a~a~~~v~~~~~s~~~~~lt~~~~~~~~~~~~v~~~~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~d 241 (569) +.+. .... . .+..+ ++. T Consensus 103 -----~~~~--------------~~~~-~-------------~~~~t-------------g~~----------------- 119 (396) T protein:vir:20 103 -----SNII--------------GTTD-E-------------NGQYT-------------GLK----------------- 119 (396) T ss_pred -----cccc--------------cccc-c-------------ccccc-------------hhh----------------- Confidence 0000 0000 0 00000 000 Q ss_pred chhhccccccceeehhhhhhhhhhhccCceEEEEeccCccccccceeeeecCCCCCchhHHHHHHHHHHhcCccEEEecC Q lcl|Aclame:pro 242 AVTKVDVKTEAVFVGALAGDIAKQLEYNDYVTVAVDATKPVEDFELTNLTGGSDGTAPESWANKFPLLANEGGYYLVPLT 321 (569) Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~a~~~~~~LtGG~dg~~~~~~~~~l~~le~~~~~~i~~~~ 321 (569) .+. ...+ +.+ ..+ . ..+.+.. T Consensus 120 -------------------al~---~~~~-------------------~~~----~~p----~----------i~~ap~~ 140 (396) T protein:vir:20 120 -------------------AML---AAES-------------------VTG----VKP----R----------ILGVPGL 140 (396) T ss_pred -------------------hhh---hhcc-------------------ccc----cch----h----------hhhhhhh Confidence 000 0000 000 000 0 0111223 Q ss_pred CCHHHHHHHHHHHHHHhcCCCeEEEEEcCCCCCCHHHHHHHhhhcCCceEEEEeccceecc-CCcceeeechHHHHHHHH Q lcl|Aclame:pro 322 DKQAVHSEALAFVKDRTDNGDPMRIIVGGGTNETVEESITRATNLRDPRASLVGFSGTRKM-DDGRLLKLPGYMMASQIA 400 (569) Q Consensus 322 ~d~~v~~~l~~~v~~~~~~g~~~~~vv~~~~~~~~~~~~~~a~~~n~~~v~~v~~~~~~~~-~~g~~~~~~~~~~aa~vA 400 (569) .++.+++++.++|++++ +++++..+...+++++++....|++.++++++|++.... ..+....+|++ +++| T Consensus 141 ~~~~v~~al~~~~~~~~-----~~~~iD~p~~~~~~~a~~~r~~~~s~~~~~~~P~~~~~d~~~~~~~~~p~s---~~~A 212 (396) T protein:vir:20 141 DTKEVAVALASVCQKLR-----AFGYISAWGCKTISEVKAYRQNFSQRELMVIWPDFLAWDTVTSTTATAYAT---ARAL 212 (396) T ss_pred ccHHHHHHHHHHHhcCC-----cEEEEecCCCCCHHHHHHHhhCCCCceEEEEcCccccccCcCCcceeechh---HHHH Confidence 34678888999987763 688999888889999999999999999999999886432 23444556654 7888 Q ss_pred HHhhcCc----hhcCccceeec-ccccccc------CCHHHHHHHHhcCcEEEEEecCCcceEEEEeeceeccCCCCchh Q lcl|Aclame:pro 401 GIASGLE----VGEAITFKHFN-VTSVDRV------FESSQLDMLNESGVISIEFVRNRTLTAFRVVQDVTTYNDKSDPV 469 (569) Q Consensus 401 G~~A~~~----~~~s~T~~~~~-~~~~~~~------~t~~e~~~l~~~Gv~~l~~~~~~~~~~~ri~~~itT~~~~~d~~ 469 (569) |++|..+ +++||.|+.+. +.++... ++..|.+.|+++|++++.. +.++|+|.+.|+ +.|+. T Consensus 213 g~~a~~d~~~g~~~spaN~~l~gi~~~~~~~~~~~~~~~~~~~~Ln~~gi~~~~~-----~~G~~~wG~rT~---s~d~~ 284 (396) T protein:vir:20 213 GLRAKIDQEQGWHKTLSNVGVNGVTGISASVFWDLQESGTDADLLNESGVTTLIR-----RDGFRFWGNRTC---SDDPL 284 (396) T ss_pred HHHHHhhhhcCcEeccCCceeccceecceecccccCCCcchhhhhhhcCcEEEEc-----CCCEEEEccccc---CCCcc Confidence 8888777 66799999986 4455443 4578899999999999842 346899999887 45778 Q ss_pred hhhhhHHHHHHHHHHHHHHHHHhcCCcccCChHHHHHHHHHHHHHHHHHHhCCcccCCCcc-----ccEEecCCCEEEEE Q lcl|Aclame:pro 470 KNEMSVGEANDFLVSELKIELDNNFIGTKVIDTSASLIKNFIQSFLDNKKRAREIQDYTPE-----EVQVVLEGDVASIS 544 (569) Q Consensus 470 ~~~i~v~R~~d~i~~~i~~~~~~~~iGk~nn~~~~~~v~~~i~~~L~~l~~~gaI~~~~~~-----d~~v~~~~d~~~v~ 544 (569) |++|++||++|+|+++|++.+ .+|+||+|+..+|..|+..++.||.+||++|+|.||..+ +.+.++..++++++ T Consensus 285 ~~~i~~rR~~~~i~~~~~~~~-~~~v~e~~~~~~~~~i~~~i~~~L~~l~~~G~l~g~~v~~d~~~nt~~~i~~G~~~~~ 363 (396) T protein:vir:20 285 FLFENYTRTAQVVADTMAEAH-MWAVDKPITATLIRDIVDGINAKFRELKTNGYIVDATCWFSEESNDAETLKAGKLYID 363 (396) T ss_pred cceeehhhHHHHHHHHHHHHH-HHhccCCCCHHHHHHHHHHHHHHHHHHHhCcceeceEEEEecCCCCHHHhhCCEEEEE Confidence 999999999999999999987 589999999999999999999999999999999997642 22345678999999 Q ss_pred EEEEEccceeEEEEEEEEEeeeeeC Q lcl|Aclame:pro 545 MTVMPIRSLNKITVQLVYKQQILTA 569 (569) Q Consensus 545 ~~v~pv~~~e~I~~ti~v~~~~~~~ 569 (569) +.++|+.|+|||.+++.+.++.+++ T Consensus 364 i~~~p~~p~e~i~~~~~~~~~~~~~ 388 (396) T protein:vir:20 364 YDYTPVPPLENLTLRQRITDKYLAN 388 (396) T ss_pred EEEEecCCcceEEEEEEEchHHHHH Confidence 9999999999999999999999998 No 41 >protein:vir:1172 Length: 391 # NCBI annotation: hypothetical protein # Family: family:all:115 # MgeID: mge:24 # MgeName: phi CTX # Cross-refs: genbank:acc:NP_490621;genbank:gi:17313241;genbank:GeneID:927300 Probab=100.00 E-value=6e-51 Score=295.91 Aligned_cols=361 Identities=18% Similarity=0.149 Sum_probs=269.7 Q ss_pred CCCccccCcceecCceEEEEEcCCCccccCCCCceEEEEeccC-----CCCCceeEEEcChHHHHHHhcC-cchHHHHHH Q lcl|Aclame:pro 1 MAVEQFPRKKVSRPHTEITVDTSGIGGSSSSSDKTLMLVGSAK-----GGKPDTVYRFRNYQQAKQVLRS-GDLLDAIEL 74 (569) Q Consensus 1 ma~~~~~~~~~~~PGvyi~~~~~~~~~~~~~~~~~~~~~g~a~-----~G~~~~~~~i~~~~~~~~~fg~-g~l~~~~~~ 74 (569) |+-.++ +|||||++..++.+++..+++++.+|+|.+. -+|.++|++|+++.++...||. |.|.++++. T Consensus 1 M~~~~~------~~GV~v~e~~~~~~~i~~v~tavig~vg~a~~a~~~~~~~~~p~~v~s~~~~~~~~g~~~tl~~al~~ 74 (391) T protein:vir:11 1 MAADQY------HHGVRVQEINDGTRPIRTIATAIIGLVATAEDADATAFPLDTPVLITNVQAAIGKAGTSGTLPASLQA 74 (391) T ss_pred CCCCcC------CCcEEEEECCCCcceecccCCceeEEEEecCCCCCccccccccEEEecchhhheecCCCccchhhhhh Confidence 665544 7999999999999999999999999999988 4588999999999999999985 568888887 Q ss_pred HhhhhhhhccCCceEEEEEcCCCccceeeccceEEEEecCCcccceeEEEEecCCCCcceEEEEEecCCceeeecccccc Q lcl|Aclame:pro 75 AWNASDVNTASAGDILAVRVEDAKNATLTKGGLTFASTIYGVDANEIQVALEDNNLTHTKRLTVAFSKDGYKKVFDNLGK 154 (569) Q Consensus 75 ~~~~~~~~~~g~~~~~~~rv~~~~~a~~~~~~l~~~a~~~G~~gn~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (569) .| .++++.||++++..+.....+. .+. T Consensus 75 ~~------~~~g~~~~vv~~~~~~~~~~t~--------------------------------------------~d~--- 101 (391) T protein:vir:11 75 IA------DQANAATVVVRVKPGEDEAATN--------------------------------------------SAV--- 101 (391) T ss_pred hh------ccccceeEEeeecccccccccc--------------------------------------------hhh--- Confidence 76 4789999999885322111100 000 Q ss_pred eeEEEecCcccceeEEEEecCccceeeeeeeccccccccceeeeeccccccccceehhhhhhcccccceeEEecccCCcc Q lcl|Aclame:pro 155 IFSIQYKGSEAQANFTIAQDSISKKATTLTLNVGSEPESTTEVMKYELGQGVYSETNVLVSAINSLPDWEAKFFPIGDKN 234 (569) Q Consensus 155 ~~~v~~~G~~a~a~~~v~~~~~s~~~~~lt~~~~~~~~~~~~v~~~~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 234 (569) .|. .+.. ........+... T Consensus 102 ------~g~-----------------------~~a~--------------~~~~g~~a~~~~------------------ 120 (391) T protein:vir:11 102 ------IGG-----------------------VSAD--------------GKYTGMKALLAA------------------ 120 (391) T ss_pred ------hcc-----------------------cccc--------------cchhhhhhhhhh------------------ Confidence 000 0000 000000000000 Q ss_pred eecccccchhhccccccceeehhhhhhhhhhhccCceEEEEeccCccccccceeeeecCCCCCchhHHHHHHHHHHhcCc Q lcl|Aclame:pro 235 LPTDALEAVTKVDVKTEAVFVGALAGDIAKQLEYNDYVTVAVDATKPVEDFELTNLTGGSDGTAPESWANKFPLLANEGG 314 (569) Q Consensus 235 ~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~a~~~~~~LtGG~dg~~~~~~~~~l~~le~~~~ 314 (569) ..... . ... T Consensus 121 ----------------------------------~~~~~--~-----------------------------------~p~ 129 (391) T protein:vir:11 121 ----------------------------------KARLG--V-----------------------------------VPR 129 (391) T ss_pred ----------------------------------hhhhe--e-----------------------------------ccc Confidence 00000 0 000 Q ss_pred cEEEecCCCHHHHHHHHHHHHHHhcCCCeEEEEEcCCCCCCHHHHHHHhhhcCCceEEEEeccceecc-CCcceeeechH Q lcl|Aclame:pro 315 YYLVPLTDKQAVHSEALAFVKDRTDNGDPMRIIVGGGTNETVEESITRATNLRDPRASLVGFSGTRKM-DDGRLLKLPGY 393 (569) Q Consensus 315 ~~i~~~~~d~~v~~~l~~~v~~~~~~g~~~~~vv~~~~~~~~~~~~~~a~~~n~~~v~~v~~~~~~~~-~~g~~~~~~~~ 393 (569) ....+..++.++++++.++|+++ .+++++..+...+++++++....|+++++++++|++.... ..+....+|++ T Consensus 130 ~~~ap~~~~~~v~~al~~~~~~~-----~~~~i~D~p~~~t~~~a~~~r~~~~s~~~~~~~p~~~~~~~~~~~~~~~p~s 204 (391) T protein:vir:11 130 ILGVPGLDTQPVATALIAIAQQL-----RAFAYVSASGCKTKEEATAYRENFAAREAMVIWPDFLTWSTVVNQTVPAPAV 204 (391) T ss_pred cccccccccHHHHHHHHHhhccc-----ceEEEEEcCCCCCHHHHHHHhhhcCCceEEEEcCcceecccccCceEEechH Confidence 01111222356788888888765 4889999888889999999999999999999999986542 33444556654 Q ss_pred HHHHHHHHHhhcCc----hhcCccceeec-cccccccC------CHHHHHHHHhcCcEEEEEecCCcceEEEEeeceecc Q lcl|Aclame:pro 394 MMASQIAGIASGLE----VGEAITFKHFN-VTSVDRVF------ESSQLDMLNESGVISIEFVRNRTLTAFRVVQDVTTY 462 (569) Q Consensus 394 ~~aa~vAG~~A~~~----~~~s~T~~~~~-~~~~~~~~------t~~e~~~l~~~Gv~~l~~~~~~~~~~~ri~~~itT~ 462 (569) +++||++|.++ +++||.|+.+. +.++...+ ++.|.+.|+++|++++.. +.++|+|.+.|+ T Consensus 205 ---~~~ag~~a~~d~~~g~~~span~~l~gi~~~~~~~~~~~~~~~~~~~~Ln~~gi~~~~~-----~~G~~~wG~rT~- 275 (391) T protein:vir:11 205 ---AQALGLRARIDQEVGWHKTLSNVAVNGVTGISADVFWDLQSPSTDANYLNENEVTTLVQ-----EGGFRFWGSRTC- 275 (391) T ss_pred ---HHHHHHHHHhhccCCcEEccCCceeeceeecccccccccCCCcchhhhhhhcCcEEEEc-----CCCEEEEccccc- Confidence 88899998877 88899999986 55555443 467889999999999832 346899999987 Q ss_pred CCCCchhhhhhhHHHHHHHHHHHHHHHHHhcCCcccCChHHHHHHHHHHHHHHHHHHhCCcccCCCcc-----ccEEecC Q lcl|Aclame:pro 463 NDKSDPVKNEMSVGEANDFLVSELKIELDNNFIGTKVIDTSASLIKNFIQSFLDNKKRAREIQDYTPE-----EVQVVLE 537 (569) Q Consensus 463 ~~~~d~~~~~i~v~R~~d~i~~~i~~~~~~~~iGk~nn~~~~~~v~~~i~~~L~~l~~~gaI~~~~~~-----d~~v~~~ 537 (569) +.|+.|+++++||++|+|+++|++.+ .+|++|||+..+|..|+..++.||.+||++|+|.|+... +.+.+++ T Consensus 276 --~~d~~~~~i~vrR~~~~i~~~~~~~~-~~~v~e~n~~~~~~~i~~~i~~~l~~l~~~g~l~g~~~~~~~~~n~~~~i~ 352 (391) T protein:vir:11 276 --SDDPLFAFENYTRTAQVLADTIAEAH-MWAVDKPMHPSLVRDILEGVNAKFRELKGLGLIIDAQAWYDPNVNDKDTLK 352 (391) T ss_pred --CCCcccceeehhhHHHHHHHHHHHHH-HHhccCCCCHHHHHHHHHHHHHHHHHHHhccceeceEEEEecCCCCHHHhh Confidence 34678999999999999999999987 589999999999999999999999999999999997532 2344567 Q ss_pred CCEEEEEEEEEEccceeEEEEEEEEEeeeeeC Q lcl|Aclame:pro 538 GDVASISMTVMPIRSLNKITVQLVYKQQILTA 569 (569) Q Consensus 538 ~d~~~v~~~v~pv~~~e~I~~ti~v~~~~~~~ 569 (569) +++++++++++|+.|+|||.+++.+..+.++. T Consensus 353 ~G~~~~~i~~~p~~p~e~i~~~~~~~~~~~~~ 384 (391) T protein:vir:11 353 AGKLRITYDYTPVPPLEDLTFFQKITDSYLVD 384 (391) T ss_pred CCeEEEEEEEEecCCcceEEEEEEEchHHHHH Confidence 89999999999999999999999999999887 No 42 >protein:vir:98553 Length: 395 # NCBI annotation: gp21 # Family: family:all:115 # MgeID: mge:1533 # MgeName: PSP3 # Cross-refs: genbank:acc:NP_958076;genbank:gi:41057373;genbank:GeneID:2744224 Probab=100.00 E-value=4.1e-50 Score=291.35 Aligned_cols=361 Identities=16% Similarity=0.100 Sum_probs=268.5 Q ss_pred CcceecCceEEEEEcCCCccccCCCCceEEEEeccCCC-----CCceeEEEcChHHHHHHhcC-cchHHHHHHHhhhhhh Q lcl|Aclame:pro 8 RKKVSRPHTEITVDTSGIGGSSSSSDKTLMLVGSAKGG-----KPDTVYRFRNYQQAKQVLRS-GDLLDAIELAWNASDV 81 (569) Q Consensus 8 ~~~~~~PGvyi~~~~~~~~~~~~~~~~~~~~~g~a~~G-----~~~~~~~i~~~~~~~~~fg~-g~l~~~~~~~~~~~~~ 81 (569) +.+| .|||||++.+++.+++..+++++.+|+|.++.+ |.++|++|+++.++...||. +.|.+++...| T Consensus 1 m~~~-~~GV~v~e~~~g~~~v~~v~tav~~~vgta~~~~~~~~p~~~pv~v~s~~~~~~~~g~~~tl~~al~~~~----- 74 (395) T protein:vir:98 1 MSDF-HHGTQVIEINDGTRVISTVATAVVGMVCTASDADATLFPLNEPVLITNVQSAIAKAGKKGTLAASLQAIA----- 74 (395) T ss_pred CCCC-CCCeEEEEcCCCcccccccCcceEEEEeeccCCCccccccccceEeechHHhHhhcccccchhhHHHHHh----- Confidence 6677 489999999999999999999999999998765 56899999999999999995 56777877766 Q ss_pred hccCCceEEEEEcCCCccceeeccceEEEEecCCcccceeEEEEecCCCCcceEEEEEecCCceeeecccccceeEEEec Q lcl|Aclame:pro 82 NTASAGDILAVRVEDAKNATLTKGGLTFASTIYGVDANEIQVALEDNNLTHTKRLTVAFSKDGYKKVFDNLGKIFSIQYK 161 (569) Q Consensus 82 ~~~g~~~~~~~rv~~~~~a~~~~~~l~~~a~~~G~~gn~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 161 (569) .+|++.|+++++..+....... . . T Consensus 75 -~~~~~~~~vv~~~~~~~~~~~~----------------------------~--~------------------------- 98 (395) T protein:vir:98 75 -DQSKPVTVVVRVEDGTGDDEEA----------------------------A--L------------------------- 98 (395) T ss_pred -hccCceEEEeeccccccccccc----------------------------c--c------------------------- Confidence 5788999988774211110000 0 0 Q ss_pred CcccceeEEEEecCccceeeeeeeccccccccceeeeeccccccccceehhhhhhcccccceeEEecccCCcceeccccc Q lcl|Aclame:pro 162 GSEAQANFTIAQDSISKKATTLTLNVGSEPESTTEVMKYELGQGVYSETNVLVSAINSLPDWEAKFFPIGDKNLPTDALE 241 (569) Q Consensus 162 G~~a~a~~~v~~~~~s~~~~~lt~~~~~~~~~~~~v~~~~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~d 241 (569) .. +.. . T Consensus 99 ------------------a~--------------~~~--~---------------------------------------- 104 (395) T protein:vir:98 99 ------------------AQ--------------TVS--N---------------------------------------- 104 (395) T ss_pred ------------------cc--------------ccc--c---------------------------------------- Confidence 00 000 0 Q ss_pred chhhccccccceeehhhhhhhhhhhccCceEEEEeccCccccccceeeeecCCCCCchhHHHHHHHHHHh----cCccEE Q lcl|Aclame:pro 242 AVTKVDVKTEAVFVGALAGDIAKQLEYNDYVTVAVDATKPVEDFELTNLTGGSDGTAPESWANKFPLLAN----EGGYYL 317 (569) Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~a~~~~~~LtGG~dg~~~~~~~~~l~~le~----~~~~~i 317 (569) +.|+.+.....+..++|...+. .....+ T Consensus 105 ------------------------------------------------i~g~~~~~~~~Tgl~al~~~~~~~~~~p~il~ 136 (395) T protein:vir:98 105 ------------------------------------------------IIGGTDENGKYTGIKALLTAQAVTGVKPRILG 136 (395) T ss_pred ------------------------------------------------cccccccccchhHHHHHhhhhhhhccchhhcc Confidence 0000000000000001110000 001122 Q ss_pred EecCCCHHHHHHHHHHHHHHhcCCCeEEEEEcCCCCCCHHHHHHHhhhcCCceEEEEeccceecc-CCcceeeechHHHH Q lcl|Aclame:pro 318 VPLTDKQAVHSEALAFVKDRTDNGDPMRIIVGGGTNETVEESITRATNLRDPRASLVGFSGTRKM-DDGRLLKLPGYMMA 396 (569) Q Consensus 318 ~~~~~d~~v~~~l~~~v~~~~~~g~~~~~vv~~~~~~~~~~~~~~a~~~n~~~v~~v~~~~~~~~-~~g~~~~~~~~~~a 396 (569) .+...++.+++++.++|++++ +++++..+...+++++++....|+|+++++++|++.... .++....+|++ T Consensus 137 ap~~~~~~v~~al~~~~~~~~-----~~~~~d~p~~~t~~~a~~~~~~~~s~~~~~~~p~~~~~d~~~~~~~~~p~s--- 208 (395) T protein:vir:98 137 VPGLDTKEVAVALASAAIKLR-----AFAYVSAWGCKTISEAMEYRKNFSQRELMVIWPDFLAWDTVKNTTATAYAT--- 208 (395) T ss_pred cccccccHHHHHHHHHhhhcC-----cEEEEEcCCCCCHHHHHHHHhccCCceEEEEecceeEecccCCceeeechH--- Confidence 333456678889999998764 688999888889999999999999999999999986432 33444556654 Q ss_pred HHHHHHhhcCc----hhcCccceeec-ccccccc------CCHHHHHHHHhcCcEEEEEecCCcceEEEEeeceeccCCC Q lcl|Aclame:pro 397 SQIAGIASGLE----VGEAITFKHFN-VTSVDRV------FESSQLDMLNESGVISIEFVRNRTLTAFRVVQDVTTYNDK 465 (569) Q Consensus 397 a~vAG~~A~~~----~~~s~T~~~~~-~~~~~~~------~t~~e~~~l~~~Gv~~l~~~~~~~~~~~ri~~~itT~~~~ 465 (569) +++||++|..+ +++||.|+.+. +.++... ++..|++.|+++|++++.. +.++|+|.+.|+ + T Consensus 209 ~~~AG~~a~~d~~~g~~~spaN~~i~gi~~~~~~~~~~~~~~~~~~~~Ln~~gI~~~~~-----~~G~~~wG~rT~---s 280 (395) T protein:vir:98 209 ARALGLRAYIDQTVGWHKTLSNVGVQGVTGISASVFWDLQASGTDADLLNEAGVTTLVR-----KDGFRFWGNRTC---S 280 (395) T ss_pred HHHHHHHHHhhcccCcEeccCCceeecccccceecccccCCCcchHHhhhhcCcEEEEc-----CCCEEEEccccc---C Confidence 77888888775 78899999885 5555443 3578999999999999942 246899999886 4 Q ss_pred CchhhhhhhHHHHHHHHHHHHHHHHHhcCCcccCChHHHHHHHHHHHHHHHHHHhCCcccCCCcc-----ccEEecCCCE Q lcl|Aclame:pro 466 SDPVKNEMSVGEANDFLVSELKIELDNNFIGTKVIDTSASLIKNFIQSFLDNKKRAREIQDYTPE-----EVQVVLEGDV 540 (569) Q Consensus 466 ~d~~~~~i~v~R~~d~i~~~i~~~~~~~~iGk~nn~~~~~~v~~~i~~~L~~l~~~gaI~~~~~~-----d~~v~~~~d~ 540 (569) .|+.|++|++||++|+|+++|++.. .+|++|||+..+|..|+..|+.||.+||++|+|.||... +.+.++.+++ T Consensus 281 ~d~~~~~i~~rR~~~~i~~~i~~~~-~~~v~e~~~~~~~~~i~~~i~~~L~~l~~~g~l~g~~v~~d~~~nt~~~i~~G~ 359 (395) T protein:vir:98 281 DDPLFLFENYTRTAQVLADTMAEAH-MWAVDKPITATLIRDIVDGINAKFRELKSNGYIVEGKCWFDEESNDKETLKAGK 359 (395) T ss_pred CCcccceeehhhHHHHHHHHHHHHH-HHhccCCCCHHHHHHHHHHHHHHHHHHHhCCceeceEEEEecCCCCHHHhhCCe Confidence 5778999999999999999999987 589999999999999999999999999999999997531 2233456789 Q ss_pred EEEEEEEEEccceeEEEEEEEEEeeeeeC Q lcl|Aclame:pro 541 ASISMTVMPIRSLNKITVQLVYKQQILTA 569 (569) Q Consensus 541 ~~v~~~v~pv~~~e~I~~ti~v~~~~~~~ 569 (569) +++++.++|+.|+|||.+++.+..+.+++ T Consensus 360 ~~~~i~~~p~~p~e~I~~~~~~~~~~~~~ 388 (395) T protein:vir:98 360 LYIDYDYTPVPPLESLTLRQRITDKYLVN 388 (395) T ss_pred EEEEEEEEecCCcceEEEEEEEchHHHHH Confidence 99999999999999999999999999987 No 43 >protein:vir:100323 Length: 393 # NCBI annotation: tail sheath protein FI # Family: family:all:115 # MgeID: mge:1484 # MgeName: phi-MhaA1-PHL101 # Cross-refs: genbank:acc:YP_655492;genbank:gi:109289960;genbank:GeneID:4157366 Probab=100.00 E-value=1.5e-48 Score=282.72 Aligned_cols=357 Identities=14% Similarity=0.114 Sum_probs=263.7 Q ss_pred CCCccccCcceecCceEEEEEcCCCccccCCCCceEEEEeccCCC-----CCceeEEEcChHHHHHHhcC-cchHHHHHH Q lcl|Aclame:pro 1 MAVEQFPRKKVSRPHTEITVDTSGIGGSSSSSDKTLMLVGSAKGG-----KPDTVYRFRNYQQAKQVLRS-GDLLDAIEL 74 (569) Q Consensus 1 ma~~~~~~~~~~~PGvyi~~~~~~~~~~~~~~~~~~~~~g~a~~G-----~~~~~~~i~~~~~~~~~fg~-g~l~~~~~~ 74 (569) |+= -.+..|||||++.+++.+++..+++++.+|+|.+..+ |.++|++|+++.++.+.||. |.|.++++. T Consensus 1 m~m-----~~~~~~GV~v~e~~~g~~~i~~~~tav~~~vgta~~~~~~~~pln~pv~i~s~~~~~~~~g~~g~L~~al~~ 75 (393) T protein:vir:10 1 MSI-----LDTYLHGVEVVEVNAGGVTISTAATSVIGVVCTGDQADAETFPLNTPVLITNPLNYLEKAGSTGTLRRTLNS 75 (393) T ss_pred CCC-----CCccCCCeEEEEcCCCcceecccCcceeEEEeeccCcCcccccCccceEecchHHHHHhhCCccchhhhhhh Confidence 553 3344599999999999999999999999999999887 88999999999999999995 678888888 Q ss_pred HhhhhhhhccCCceEEEEEcCCCccceeeccceEEEEecCCcccceeEEEEecCCCCcceEEEEEecCCceeeecccccc Q lcl|Aclame:pro 75 AWNASDVNTASAGDILAVRVEDAKNATLTKGGLTFASTIYGVDANEIQVALEDNNLTHTKRLTVAFSKDGYKKVFDNLGK 154 (569) Q Consensus 75 ~~~~~~~~~~g~~~~~~~rv~~~~~a~~~~~~l~~~a~~~G~~gn~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (569) .| .+++..||++|+..+..+..+.. + T Consensus 76 ~~------~~~~~~~~vv~v~~~~~~~~t~~------------------------------------------------~ 101 (393) T protein:vir:10 76 IG------SIVKTPTVIVRVAESDDSDTLTA------------------------------------------------N 101 (393) T ss_pred hh------cccCceEEEeecccCcccccccc------------------------------------------------c Confidence 77 47899999999853221111000 0 Q ss_pred eeEEEecCcccceeEEEEecCccceeeeeeeccccccccceeeeeccccccccceehhhhhhcccccceeEEecccCCcc Q lcl|Aclame:pro 155 IFSIQYKGSEAQANFTIAQDSISKKATTLTLNVGSEPESTTEVMKYELGQGVYSETNVLVSAINSLPDWEAKFFPIGDKN 234 (569) Q Consensus 155 ~~~v~~~G~~a~a~~~v~~~~~s~~~~~lt~~~~~~~~~~~~v~~~~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 234 (569) + .| + ... ...+. . T Consensus 102 i-----ig-----------~---------------~~~------------~~~tg-l----------------------- 114 (393) T protein:vir:10 102 I-----VG-----------T---------------QEN------------GKFTG-I----------------------- 114 (393) T ss_pred c-----cc-----------c---------------ccc------------chhhH-H----------------------- Confidence 0 00 0 000 00000 0 Q ss_pred eecccccchhhccccccceeehhhhhhhhhhhccCceEEEEeccCccccccceeeeecCCCCCchhHHHHHHHHHHh--- Q lcl|Aclame:pro 235 LPTDALEAVTKVDVKTEAVFVGALAGDIAKQLEYNDYVTVAVDATKPVEDFELTNLTGGSDGTAPESWANKFPLLAN--- 311 (569) Q Consensus 235 ~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~a~~~~~~LtGG~dg~~~~~~~~~l~~le~--- 311 (569) .+|...+. T Consensus 115 ---------------------------------------------------------------------~al~~~~~~~~ 125 (393) T protein:vir:10 115 ---------------------------------------------------------------------KALLTAQSTVF 125 (393) T ss_pred ---------------------------------------------------------------------HHHHhhhhhcc Confidence 00000000 Q ss_pred -cCccEEEecCCCHHHHHHHHHHHHHHhcCCCeEEEEEcCCCCCCHHHHHHHhhhcCCceEEEEeccceec-cCCcceee Q lcl|Aclame:pro 312 -EGGYYLVPLTDKQAVHSEALAFVKDRTDNGDPMRIIVGGGTNETVEESITRATNLRDPRASLVGFSGTRK-MDDGRLLK 389 (569) Q Consensus 312 -~~~~~i~~~~~d~~v~~~l~~~v~~~~~~g~~~~~vv~~~~~~~~~~~~~~a~~~n~~~v~~v~~~~~~~-~~~g~~~~ 389 (569) .....+.+..++.+++.++.++|++++. + .++..++..+.++++.....+++.+.++++|+.... ...+.... T Consensus 126 ~~p~li~apg~~~~~~~~al~~~~~~~~~----~-~~v~d~~~~t~~~ai~~~~~~~s~~~~~~~P~~~~~d~~~~~~~~ 200 (393) T protein:vir:10 126 VKPKLLCVPQHDNQAVATELLSVAKKLNA----F-AFISDNGATTKEQAYTYRQNFSQREGMMIFGDWKSYNTDKKAYDT 200 (393) T ss_pred eeeeeeeeccccchHHHHHHHHHhhccCc----E-EEEEcCCCCCHHHHHHHhhhcCCceEEEEecccccccccCCceeE Confidence 0000112223345677888899987642 3 344445667889999999999999999999987543 23344455 Q ss_pred echHHHHHHHHHHhhcCc----hhcCccceeec-ccccccc------CCHHHHHHHHhcCcEEEEEecCCcceEEEEeec Q lcl|Aclame:pro 390 LPGYMMASQIAGIASGLE----VGEAITFKHFN-VTSVDRV------FESSQLDMLNESGVISIEFVRNRTLTAFRVVQD 458 (569) Q Consensus 390 ~~~~~~aa~vAG~~A~~~----~~~s~T~~~~~-~~~~~~~------~t~~e~~~l~~~Gv~~l~~~~~~~~~~~ri~~~ 458 (569) +|++ +++||++|..+ +++||.|+.+. +.++... +++.|.+.|+++|++++. + +.++|+|.+ T Consensus 201 ~p~s---~~~Ag~~a~~d~~~G~~~spaN~~l~gi~~~~~~~~~~~~~~~~~~~~Ln~~gI~t~~--~---~~G~~~wG~ 272 (393) T protein:vir:10 201 DYAV---ARACALQAYIDKTVGWHKNISNVELDGVTGITKAVEFDINESSTEANYLNEKGITICL--N---HNGFRYWGS 272 (393) T ss_pred eehh---HHHHHHHHHhhcCCCcEEccCCceeeceeecceecccccCCCcchhHhHhhcCceEEE--c---CCCEEEEcc Confidence 6654 77788888776 77899999986 5555543 347889999999999983 2 346899999 Q ss_pred eeccCCCCchhhhhhhHHHHHHHHHHHHHHHHHhcCCcccCChHHHHHHHHHHHHHHHHHHhCC--cccCCCc----ccc Q lcl|Aclame:pro 459 VTTYNDKSDPVKNEMSVGEANDFLVSELKIELDNNFIGTKVIDTSASLIKNFIQSFLDNKKRAR--EIQDYTP----EEV 532 (569) Q Consensus 459 itT~~~~~d~~~~~i~v~R~~d~i~~~i~~~~~~~~iGk~nn~~~~~~v~~~i~~~L~~l~~~g--aI~~~~~----~d~ 532 (569) .|+ +.|+.|+++++||++|+|+++|++.+ .+|++|||+..+|..|+..++.||..||+.| +|.++.. ++- T Consensus 273 rT~---s~d~~~~~i~vrR~~~~i~~~i~~~~-~~~v~e~~~~~~~~~i~~~i~~~L~~l~~~g~~al~g~~v~~~~~nt 348 (393) T protein:vir:10 273 RTL---ATDTRWAFQQSVRTAQIIKETIGAGL-AWAVDMPLTPLRVKTMLEAINNKLRSWASGDDPRILGARVWVAEEIT 348 (393) T ss_pred ccc---CCCcccceeehhhHHHHHHHHHHHHH-HHhccCCCCHHHHHHHHHHHHHHHHHHHhccccccccceEEecCCCC Confidence 886 35788999999999999999999987 5799999999999999999999999999855 7888642 233 Q ss_pred EEecCCCEEEEEEEEEEccceeEEEEEEEEEeeeeeC Q lcl|Aclame:pro 533 QVVLEGDVASISMTVMPIRSLNKITVQLVYKQQILTA 569 (569) Q Consensus 533 ~v~~~~d~~~v~~~v~pv~~~e~I~~ti~v~~~~~~~ 569 (569) ..++..+++++++.++|+.|+|||.+++.+.++.++. T Consensus 349 ~~~i~~G~~~~~i~~~p~~p~e~I~~~~~~~~~~~~~ 385 (393) T protein:vir:10 349 ADIIKSGKFVIKYDYHWIPSLESLGLEQRVNDEYVVD 385 (393) T ss_pred HHHhhCCEEEEEEEEEecCCcceEEEEEEEchHHHHH Confidence 3456789999999999999999999999999998877 No 44 >protein:vir:96740 Length: 388 # NCBI annotation: phage tail sheath protein FI-like # Family: family:all:115 # MgeID: mge:1628 # MgeName: VP882 # Cross-refs: genbank:acc:YP_001039839;genbank:gi:126010913;genbank:GeneID:5076250 Probab=100.00 E-value=6.2e-48 Score=279.39 Aligned_cols=353 Identities=14% Similarity=0.105 Sum_probs=260.4 Q ss_pred CCCccccCcceecCceEEEEEcCCCccccCCCCceEEEEeccCCC----CCceeEEEcChHHHHHHhcC----cchHHHH Q lcl|Aclame:pro 1 MAVEQFPRKKVSRPHTEITVDTSGIGGSSSSSDKTLMLVGSAKGG----KPDTVYRFRNYQQAKQVLRS----GDLLDAI 72 (569) Q Consensus 1 ma~~~~~~~~~~~PGvyi~~~~~~~~~~~~~~~~~~~~~g~a~~G----~~~~~~~i~~~~~~~~~fg~----g~l~~~~ 72 (569) |+--+ .| +|||||++.+++.+++..+++++++|+|.++-+ |.++|+.+.+++++..+++. |.|.+++ T Consensus 1 m~~~~----~~-~hGv~v~ev~~g~~~i~~~~tavi~~Vgta~~ad~~~p~~~~~~i~~~~d~~~~~~~~~~~gtl~~al 75 (388) T protein:vir:96 1 MPVID----QF-EHNGISIETHEPPPPMGPPGDNVVAWVVTAPDKHADVAFSVPFRVANTADAQYLDSTGNELGTGWHAA 75 (388) T ss_pred CCCCC----CC-CCceEEEEcCCCcccccccCcceeEEEEecCCCccccccccceeeecchhhhhhhccccccccchhhh Confidence 65421 23 479999999999999999999999999998765 78999999999999999874 3466776 Q ss_pred HHHhhhhhhhccCCceEEEEEcCCCccceeeccceEEEEecCCcccceeEEEEecCCCCcceEEEEEecCCceeeecccc Q lcl|Aclame:pro 73 ELAWNASDVNTASAGDILAVRVEDAKNATLTKGGLTFASTIYGVDANEIQVALEDNNLTHTKRLTVAFSKDGYKKVFDNL 152 (569) Q Consensus 73 ~~~~~~~~~~~~g~~~~~~~rv~~~~~a~~~~~~l~~~a~~~G~~gn~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (569) ...| .+++..|+++|+..+....++.. T Consensus 76 ~~~~------~~~~~~~~vv~v~~g~~~~at~a----------------------------------------------- 102 (388) T protein:vir:96 76 SETL------KKTSVPQYFIVVPEGADDAATMA----------------------------------------------- 102 (388) T ss_pred Hhhh------ccCCceEEEEEeccccccccccc----------------------------------------------- Confidence 6655 46778888888743222111000 Q ss_pred cceeEEEecCcccceeEEEEecCccceeeeeeeccccccccceeeeeccccccccceehhhhhhcccccceeEEecccCC Q lcl|Aclame:pro 153 GKIFSIQYKGSEAQANFTIAQDSISKKATTLTLNVGSEPESTTEVMKYELGQGVYSETNVLVSAINSLPDWEAKFFPIGD 232 (569) Q Consensus 153 ~~~~~v~~~G~~a~a~~~v~~~~~s~~~~~lt~~~~~~~~~~~~v~~~~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 232 (569) ++ T Consensus 103 -~i----------------------------------------------------------------------------- 104 (388) T protein:vir:96 103 -NI----------------------------------------------------------------------------- 104 (388) T ss_pred -ee----------------------------------------------------------------------------- Confidence 00 Q ss_pred cceecccccchhhccccccceeehhhhhhhhhhhccCceEEEEeccCccccccceeeeecCCCCCchhHHHHHHHHHHhc Q lcl|Aclame:pro 233 KNLPTDALEAVTKVDVKTEAVFVGALAGDIAKQLEYNDYVTVAVDATKPVEDFELTNLTGGSDGTAPESWANKFPLLANE 312 (569) Q Consensus 233 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~a~~~~~~LtGG~dg~~~~~~~~~l~~le~~ 312 (569) .||.+..+. -...+.+++.. T Consensus 105 ----------------------------------------------------------ig~~~~~tg--~~~gl~al~~~ 124 (388) T protein:vir:96 105 ----------------------------------------------------------IGGIDPTTG--RRTGIAALTEC 124 (388) T ss_pred ----------------------------------------------------------eeecccccc--hhhHHHHhhhc Confidence 000000000 00111111111 Q ss_pred Cc--cEEE-ec-CCCHHHHHHHHHHHHHHhcCCCeEEEEEcCCCCCCHHHHHH-----HhhhcCCceEEEEeccceec-c Q lcl|Aclame:pro 313 GG--YYLV-PL-TDKQAVHSEALAFVKDRTDNGDPMRIIVGGGTNETVEESIT-----RATNLRDPRASLVGFSGTRK-M 382 (569) Q Consensus 313 ~~--~~i~-~~-~~d~~v~~~l~~~v~~~~~~g~~~~~vv~~~~~~~~~~~~~-----~a~~~n~~~v~~v~~~~~~~-~ 382 (569) +. ..++ |. ++.+++++++.++|++++ ++++++++.... ++... ....|+|+++++++|++... . T Consensus 125 ~~~p~il~aPg~s~~~~v~~al~~~~~~~~-----~~~i~D~p~~~~-~~~~~~~~~~~~~~~~s~~~~~~~P~~~~~d~ 198 (388) T protein:vir:96 125 TERPTLIGAPGFSQNKAVIDALASMAKRLK-----CRAVIDGPSGST-QDAIDLSGLLGGEGTGHDRVYMVDPMPAIYSR 198 (388) T ss_pred ccceeEEEeeccccchHHHHHHHHHHhhcC-----cEEEEeccCCch-hHHHHHHhhhhccCcCcceEEEEeCceeeecc Confidence 11 1121 22 234678999999998763 788898875543 33332 23458999999999987543 3 Q ss_pred CCcceeeechHHHHHHHHHHhhcCchhcCccceeecccccc------ccCCHHHHHHHHhcCcEEEEEecCCcceEEEEe Q lcl|Aclame:pro 383 DDGRLLKLPGYMMASQIAGIASGLEVGEAITFKHFNVTSVD------RVFESSQLDMLNESGVISIEFVRNRTLTAFRVV 456 (569) Q Consensus 383 ~~g~~~~~~~~~~aa~vAG~~A~~~~~~s~T~~~~~~~~~~------~~~t~~e~~~l~~~Gv~~l~~~~~~~~~~~ri~ 456 (569) ..+....+|++ +.+||++|..+.++||.|+.+.+.++. ..+++.|.+.|+++|++++.. ..+.++|+| T Consensus 199 ~~~~~~~~p~s---~~~AG~~a~~D~~~spaN~~i~i~g~~~~~~~~~~~~~~~~~~Ln~~gI~~i~~---~~~~G~~~w 272 (388) T protein:vir:96 199 KAQGNIYVPPS---TIAMGAVAAVKPWESPGNQGVLIQDVARVIDYNILDKSTEGDLLNRNGVSYFAR---TSMGGFSLI 272 (388) T ss_pred cCCceeeechH---HHHHHHHHhhcCcccccCeeEEeeeecccccccccCChhhHHhhhhcCceEEEE---ecCCcEEEE Confidence 34455666664 899999999999999999988654443 344678999999999999964 455689999 Q ss_pred eceeccCCCCchhhhhhhHHHHHHHHHHHHHHHHHhcCCcccCChHHHHHHHHHHHHHHHHHHhCCcccCCCc-----cc Q lcl|Aclame:pro 457 QDVTTYNDKSDPVKNEMSVGEANDFLVSELKIELDNNFIGTKVIDTSASLIKNFIQSFLDNKKRAREIQDYTP-----EE 531 (569) Q Consensus 457 ~~itT~~~~~d~~~~~i~v~R~~d~i~~~i~~~~~~~~iGk~nn~~~~~~v~~~i~~~L~~l~~~gaI~~~~~-----~d 531 (569) .+.|+ .|+++++||++|+|+++|++.+ .+|++|||+..+|..|+..|+.||.+||++|+|.|++. .+ T Consensus 273 G~rT~-------~~~~i~vrR~~~~i~~si~~~~-~~~v~epn~~~~~~~i~~~i~~fL~~l~~~Gal~g~~~~~d~~~n 344 (388) T protein:vir:96 273 GNRTV-------TGKFISFVGLEDAIARKLEAAS-QRAMSKQLTKSFMEQEIKKINLFMQDLVAAEIIPGGEVYLHPTLN 344 (388) T ss_pred ccccc-------CCcceeehhhHHHHHHHHHHHH-HHhccCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeEEEEecCCC Confidence 98875 3999999999999999999987 58999999999999999999999999999999999743 12 Q ss_pred cEEecCCCEEEEEEEEEEccceeEEEEEEEEEeeeeeC Q lcl|Aclame:pro 532 VQVVLEGDVASISMTVMPIRSLNKITVQLVYKQQILTA 569 (569) Q Consensus 532 ~~v~~~~d~~~v~~~v~pv~~~e~I~~ti~v~~~~~~~ 569 (569) .+.++..++++++++++|+.|+|||.+++.+.++.++. T Consensus 345 t~~~i~~G~~~~~i~~~p~~pae~I~~~~~~~~~~~~~ 382 (388) T protein:vir:96 345 TVERYKNGSWYIVIDYGRYSPNEHMIFHLNAVDRIVEE 382 (388) T ss_pred CHHHhhCCEEEEEEEEEecCCcceEEEEEEEchHHHHH Confidence 34456789999999999999999999999999999997 No 45 >protein:vir:79798 Length: 717 # NCBI annotation: tail sheath subunit # Family: family:all:12069 # MgeID: mge:1874 # MgeName: 0305phi8-36 # Cross-refs: genbank:acc:YP_001429630;genbank:gi:156564120;genbank:GeneID:5525563 Probab=100.00 E-value=8.6e-47 Score=273.13 Aligned_cols=536 Identities=15% Similarity=0.161 Sum_probs=283.5 Q ss_pred CCCccccCcceecCceEEEEEcCCCc---cccCCCCceEEEEeccCCCCCceeEEEcChHHHHHHhcC----------cc Q lcl|Aclame:pro 1 MAVEQFPRKKVSRPHTEITVDTSGIG---GSSSSSDKTLMLVGSAKGGKPDTVYRFRNYQQAKQVLRS----------GD 67 (569) Q Consensus 1 ma~~~~~~~~~~~PGvyi~~~~~~~~---~~~~~~~~~~~~~g~a~~G~~~~~~~i~~~~~~~~~fg~----------g~ 67 (569) ||| | .|.---||+-+.+++.-+. ..+...+-.+.+.|.|.-||+.+|+.++ ..-+.++||. +- T Consensus 1 ~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 76 (717) T protein:vir:79 1 MAG--F-DQYQAIPGHNARFKDGNLNLKSDPNPRETESVVLLGTATDGPVMQPVRVT-PETAYNIFGKVAHENGVYNGAT 76 (717) T ss_pred CCc--h-hhhhcCCCceeeeecCceecCCCCCccccceEEEEeeccCCcccCceeeC-hhHHHhhhhhhhhhcccccchh Confidence 886 3 3444569999999998664 3444455567789999999999999998 5667789993 44 Q ss_pred hHHHHHHHhhhhhhhccCCceEEEEEcCCCccc--------ee--e------------ccc--eEEEEecCCcccceeE- Q lcl|Aclame:pro 68 LLDAIELAWNASDVNTASAGDILAVRVEDAKNA--------TL--T------------KGG--LTFASTIYGVDANEIQ- 122 (569) Q Consensus 68 l~~~~~~~~~~~~~~~~g~~~~~~~rv~~~~~a--------~~--~------------~~~--l~~~a~~~G~~gn~i~- 122 (569) |+.+.+.+| ..|...+-++|...-++- +. + -|. .|++-++.|..--..- T Consensus 77 ~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (717) T protein:vir:79 77 LLPKFEELW------AAGNRDIRLMRTTGVNAVSSLLGTSYSKNSKEVAEDKLGGAQARGNVAATFTLPNGGIVEATFLL 150 (717) T ss_pred hhHHHHHHH------hcCCcceEEEEecchhHHHHHhhcccccchhhHHHHhhcccccccceEEEEEcCCCceeeeeeee Confidence 777777777 458888999997321110 00 0 011 2333333332211100 Q ss_pred ----EEEecCCCCcceEEEEEec---CCc----------eeeecccccceeEEE----ecCccc-ceeEEEEecCcccee Q lcl|Aclame:pro 123 ----VALEDNNLTHTKRLTVAFS---KDG----------YKKVFDNLGKIFSIQ----YKGSEA-QANFTIAQDSISKKA 180 (569) Q Consensus 123 ----v~~~~~~~~~~~~~~~~~~---~~~----------~~~~~~~~~~~~~v~----~~G~~a-~a~~~v~~~~~s~~~ 180 (569) |.+.|| ..++.+--. +.+ -+.+.++.+.+ +++ |..... .-+-++-.....+.- T Consensus 151 ~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (717) T protein:vir:79 151 KARGVIIPPN----NYTLDVGTEEDMKAGTQPTFAQVLLNENVADMESEI-TVSYEFTYKDAQGETKTSEVLDNNTDKDG 225 (717) T ss_pred eecceEeCCC----cceEeccChhhhhcCCCchhhhhhhccchhhcccee-EEEEEEEeecccCcchhhhhhcCCCCCCC Confidence 111111 111111000 000 01111222211 122 111100 000000000000000 Q ss_pred -eee------eecc------------c---cccccceeee----ecccccc-ccceehhhhhhccc----ccceeE--Ee Q lcl|Aclame:pro 181 -TTL------TLNV------------G---SEPESTTEVM----KYELGQG-VYSETNVLVSAINS----LPDWEA--KF 227 (569) Q Consensus 181 -~~l------t~~~------------~---~~~~~~~~v~----~~~l~~~-~~~~~~~~~~~i~~----~~~~~~--~~ 227 (569) +-+ +.|. + .......++. ..-+..+ ......+.....+. .+-|.. .+ T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (717) T protein:vir:79 226 KPMIAKGADVTIKLEHVALAGLKLYADGIEVVDAKAFTVAGDQLTIHSNSKMKLGASLEAQYAYNLVEVIQPVIELESIF 305 (717) T ss_pred ceeEEecccceeehhhhhhhhhHHhhcchhhhhhhheeeecceEEEEecCCcccchhhHHHHHhhHHHhhccceEEeecc Confidence 000 0000 0 0000000110 0001111 00000000000000 111111 11 Q ss_pred cccCCcc--eecccccc--hhhcc--------ccccc-------eeehhhhhhhhhhhccCceEEEEeccC--cc----- Q lcl|Aclame:pro 228 FPIGDKN--LPTDALEA--VTKVD--------VKTEA-------VFVGALAGDIAKQLEYNDYVTVAVDAT--KP----- 281 (569) Q Consensus 228 ~~~~~~~--~~~~~~d~--~~~~~--------~~~~~-------~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~----- 281 (569) .+.-.+. ++.+..|. ..... +...+ +.......+.++ .++.-.+...+. .. T Consensus 306 ~g~~~n~~~~~v~~~D~~~~~~~t~~~~~~g~~~~~pl~~ts~dy~~~~~~vdgI~---~~~~~~V~~~g~~s~a~a~~~ 382 (717) T protein:vir:79 306 GGGVYNDIMRKVESKDGAVTVTITKPESKRGMISEDPLVFKSGDYTNFKMLVDAIN---NHPFNNVVRARTKPEFEATFT 382 (717) T ss_pred cCceeeeeeeEEecCCceEEEEEecccccCcceeccccccccCceeeeeeeecccc---cCchhheeeeecccccceeee Confidence 1111111 11111121 00000 00011 111111111111 000000000000 00 Q ss_pred --ccccceeeeecCCCCCch---hHH---------------HHHHHHHHhcCccEEEecCC--C-------HHHHHHHHH Q lcl|Aclame:pro 282 --VEDFELTNLTGGSDGTAP---ESW---------------ANKFPLLANEGGYYLVPLTD--K-------QAVHSEALA 332 (569) Q Consensus 282 --~a~~~~~~LtGG~dg~~~---~~~---------------~~~l~~le~~~~~~i~~~~~--d-------~~v~~~l~~ 332 (569) ........|.||.||-.+ +-| ..++..|+.+++++++++.. + ..++..+.+ T Consensus 383 ~g~~s~d~a~f~Gg~dgl~~~~ee~Y~~lGgk~~d~g~lt~~aays~LE~~dVDlVil~ga~adtt~ga~~d~va~alad 462 (717) T protein:vir:79 383 STLQAAADAKFSGGKDELSLDKEEMYKRLGGEKNEEGFVTKQGAYQYLENYEVDYVIPLGVHADTKLIGKYDDFAYQLAL 462 (717) T ss_pred ecccCchhhccCCCccccccchhhhhccccccccccccccchhhhhhcCcceeEEEEecCccccccccchhhhHHHHHHH Confidence 011122347777776432 112 24677888888887766532 1 256788999 Q ss_pred HHHHHhcCCCeEEEEEcCCCC--CCHHHHHHHhhhc------------------CC--------ceE-EEEeccceeccC Q lcl|Aclame:pro 333 FVKDRTDNGDPMRIIVGGGTN--ETVEESITRATNL------------------RD--------PRA-SLVGFSGTRKMD 383 (569) Q Consensus 333 ~v~~~~~~g~~~~~vv~~~~~--~~~~~~~~~a~~~------------------n~--------~~v-~~v~~~~~~~~~ 383 (569) ||..++...+.++++++.... .......++...+ +. .+. .+..++...... T Consensus 463 ~caalSal~r~ai~VI~l~sp~D~~~AtVe~~~~kLs~~Aaa~~~~d~~~a~a~~~~~~~idis~y~~vv~~~~~iv~~~ 542 (717) T protein:vir:79 463 ACAVMSHYNSVTIGIIPTTTPSDISLAGVEEHVKKLENYANEFYMRDRFGNIIFDADRNKIDLGQFIEVVAGPDFIVRNT 542 (717) T ss_pred HHHHhhhccccceeeeccccccccchhhHHHHHHHHHhhhhhhhhhcchhccccccccccccccceeeeeecceeEEEcC Confidence 999887666677777764322 2222221211111 11 011 111222222222 Q ss_pred CcceeeechHHHHHHHHHHhhcCchhcCccceeec-cccccccCCHHHHHHHHhcCcEEEEEecCCcceEEEEeeceecc Q lcl|Aclame:pro 384 DGRLLKLPGYMMASQIAGIASGLEVGEAITFKHFN-VTSVDRVFESSQLDMLNESGVISIEFVRNRTLTAFRVVQDVTTY 462 (569) Q Consensus 384 ~g~~~~~~~~~~aa~vAG~~A~~~~~~s~T~~~~~-~~~~~~~~t~~e~~~l~~~Gv~~l~~~~~~~~~~~ri~~~itT~ 462 (569) ....... .+|+++||+.++.++++||+|+++. +.++...++++|++.|+++|++||++. .+.++|+|.++|+. T Consensus 543 ~~~~~~~---p~AG~vAGldA~rGVwkSPANk~I~GVvgLa~~lT~sE~d~Ln~aGIntIr~~---~GrGirVWGaRTta 616 (717) T protein:vir:79 543 RLGQMAS---TPDASYIGMVSQLKTQSAPTNKPLPSVTALRYTYSANQLNRLTKARFATFKYK---QDGSIGVVDAPTSA 616 (717) T ss_pred CCceeec---CHHHHHHHHHhcCCcccccccceecccccCcccCCHHHHHHHhhCCeEEEEEe---CCceEEEEeeeecC Confidence 2222222 3469999999999999999999996 789999999999999999999999754 45689999999984 Q ss_pred CCCCchhhhhhhHHHHHHHHHHHHHHHHHhcCCcccCChHHHHHHHHHHHHHHHHHHhCCcccCCCccccEE---ecCCC Q lcl|Aclame:pro 463 NDKSDPVKNEMSVGEANDFLVSELKIELDNNFIGTKVIDTSASLIKNFIQSFLDNKKRAREIQDYTPEEVQV---VLEGD 539 (569) Q Consensus 463 ~~~~d~~~~~i~v~R~~d~i~~~i~~~~~~~~iGk~nn~~~~~~v~~~i~~~L~~l~~~gaI~~~~~~d~~v---~~~~d 539 (569) .. +..|++|++||++|+|+++|++.++ +||||||+..+|..|+..|++||.+||++|+|.||.++ ++. +++.+ T Consensus 617 sd--~sdWryInVRRl~D~Ie~sIr~al~-~yVgEPNd~~tr~~Ik~sI~afL~~L~r~GAI~Gykvd-vtnT~~di~~G 692 (717) T protein:vir:79 617 HA--GSDYTRLSTARIVKEAVNAVREVAD-PFIGEPNDTGNRNALTAAVDKRLSKMIENKALLGFDFR-LVVTPQQELLG 692 (717) T ss_pred CC--CcccceeehhhhHHHHHHHHHHHHH-HhccccCCHHHHHHHHHHHHHHHHHHHhcCceecceee-EecChhHhhCC Confidence 33 3469999999999999999999875 89999999999999999999999999999999999863 333 34567 Q ss_pred EEEEEEEEEEccceeEEEEEEEEEe Q lcl|Aclame:pro 540 VASISMTVMPIRSLNKITVQLVYKQ 564 (569) Q Consensus 540 ~~~v~~~v~pv~~~e~I~~ti~v~~ 564 (569) +++|++.++|++|||||++++++.. T Consensus 693 ~l~V~I~vaPv~PaEfI~ititITA 717 (717) T protein:vir:79 693 EGSIELSLEAPNELRRLTTIVSLSA 717 (717) T ss_pred EEEEEEEEEecCcccEEEEEEEEeC Confidence 9999999999999999999997655 No 46 >protein:vir:103168 Length: 641 # NCBI annotation: gp122 # Family: family:all:661 # MgeID: mge:1583 # MgeName: Syn9 # Cross-refs: genbank:acc:YP_717789;genbank:gi:113200626;genbank:GeneID:4239177 Probab=100.00 E-value=4.2e-47 Score=274.82 Aligned_cols=446 Identities=13% Similarity=0.070 Sum_probs=229.1 Q ss_pred ccCcceecCceEEEEEcCCCccccCCCCceEEEEeccCCCCCceeEEEcChHHHHHHhcCcchHHHHHHHhhhhhhhccC Q lcl|Aclame:pro 6 FPRKKVSRPHTEITVDTSGIGGSSSSSDKTLMLVGSAKGGKPDTVYRFRNYQQAKQVLRSGDLLDAIELAWNASDVNTAS 85 (569) Q Consensus 6 ~~~~~~~~PGvyi~~~~~~~~~~~~~~~~~~~~~g~a~~G~~~~~~~i~~~~~~~~~fg~g~l~~~~~~~~~~~~~~~~g 85 (569) -++.+|++|||||||.+.+ ++++++++++++|+|.++|||+++|++|+||.||++.||+- .+.-.+.|....+|+|| T Consensus 1 ~~m~~~~sPGVyv~E~~~~-~~i~~v~tsvaafvG~~~~GP~~~p~~v~s~~d~~~~FG~~--~~~~~l~~av~~fF~ng 77 (641) T protein:vir:10 1 MSVSNQLSPGVVIQERDLT-AVTTPIGLNVGVLAAPFTKGPVEEIFEVSTERDLASVFGEP--NDYNYEYWFTASQFLSY 77 (641) T ss_pred CCCccccCCceEEEEecCC-CcccccCCccceEEecccCCCCCccEEecCHHHHHHHcCCc--CCCcchHHHHHHHHHhc Confidence 5677899999999999987 68999999999999999999999999999999999999962 22223444455556899 Q ss_pred CceEEEEEcCC--Ccccee--------------------eccceEEEEecCCcccceeEEEEecCCCCcceEEEEEecCC Q lcl|Aclame:pro 86 AGDILAVRVED--AKNATL--------------------TKGGLTFASTIYGVDANEIQVALEDNNLTHTKRLTVAFSKD 143 (569) Q Consensus 86 ~~~~~~~rv~~--~~~a~~--------------------~~~~l~~~a~~~G~~gn~i~v~~~~~~~~~~~~~~~~~~~~ 143 (569) |++|||+|+.. +.+|+. ...+++++|++||.|||.|+|.|.+........+....... T Consensus 78 G~~~~vvRv~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~pG~~gn~l~v~i~~~~~~~~~~~~~~~~~~ 157 (641) T protein:vir:10 78 GGVLKAIRLNAASLKNSVDSGTAPLIKNLQEYETTYESSNSNTFKFASRDAGALGNSVGIFITDAGPDQIAVLPAPGTGN 157 (641) T ss_pred CCEEEEEEecCccccccccccchhhccccccccccccCcCccccEEEeccCCCcCCceEEEEEcCCCcceeeeecccccc Confidence 99999999953 223221 12358899999999999999999766432221111100000 Q ss_pred c--------eeeeccccc---------------------ceeEEEecCcccce----------eEEEEecCccceeeeee Q lcl|Aclame:pro 144 G--------YKKVFDNLG---------------------KIFSIQYKGSEAQA----------NFTIAQDSISKKATTLT 184 (569) Q Consensus 144 ~--------~~~~~~~~~---------------------~~~~v~~~G~~a~a----------~~~v~~~~~s~~~~~lt 184 (569) . +.......+ +.-.+.+.+.-... .+.+...........+. T Consensus 158 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~~a~~~~~~~~~~~~a~~~~~~i~~~~~g~~g~~~~ 237 (641) T protein:vir:10 158 EWEFVADEAVTAASGASAKVYRYSIRLTLTNVVGTFVPGGATTISISGSDESVDVLAWDAGNKYLEIALPAGGVTGIFAD 237 (641) T ss_pred cceeccceeeeeccCcccccccccccccccceeeecccCCcceeEecccccccccccccCCcceeeeeecCCcceeeeee Confidence 0 000000000 00001111100000 00000000000000000 Q ss_pred eccccccccceeee---------------------eccccccccceehhh--hhhccc---ccceeEE-ecccCC-ccee Q lcl|Aclame:pro 185 LNVGSEPESTTEVM---------------------KYELGQGVYSETNVL--VSAINS---LPDWEAK-FFPIGD-KNLP 236 (569) Q Consensus 185 ~~~~~~~~~~~~v~---------------------~~~l~~~~~~~~~~~--~~~i~~---~~~~~~~-~~~~~~-~~~~ 236 (569) ...........+.. .+....+........ .+.... .++.+.. +...+. .... T Consensus 238 ~~~~t~gt~~~t~a~~g~~~~~~~~~~~~~ia~aat~ag~~g~~~~v~~~~v~d~~~a~~~~~g~~~~~va~~~gts~~a 317 (641) T protein:vir:10 238 AQVVTQGTNTAAIASSGIERRLYIGKDSGSINFAATDAVVDTNATSATISSVRNEYAEREYLPGSKWVNVAARPGTSLYA 317 (641) T ss_pred eeeccCCccceeeecccchhhhhhccccccceeeeecccccccceeeEeeeeeeeecccccccccccccccccchhhhhh Confidence 00000000000000 000000000000000 000000 0000000 000000 0000 Q ss_pred cc---cccchhhcccc-------ccceee-----hhhhhhhh----------hh-hccCceEEEEeccC----------- Q lcl|Aclame:pro 237 TD---ALEAVTKVDVK-------TEAVFV-----GALAGDIA----------KQ-LEYNDYVTVAVDAT----------- 279 (569) Q Consensus 237 ~~---~~d~~~~~~~~-------~~~~~~-----~~~~~~~~----------~~-~~~~~~v~~~~~~~----------- 279 (569) .+ ..|......+. +...++ .+...+.. .. ...+.||......+ T Consensus 318 ~~~g~~~D~~~~lv~d~~~~~~g~~g~v~e~~~~~s~~~~~~~~~~~~~~~~~~~~~~s~~v~~~~~~~~~~~~~~~~~~ 397 (641) T protein:vir:10 318 NSVGGVNDELHVLVIDVDGKITGNPGSVLERFIGVSKASDAKTSIGEVNYYKEVIKQQSAYVYWGSHETAPFLGTAANAA 397 (641) T ss_pred hhcCCcccceEEEEEeecceeeccccceeeeeecccccCCcccccccceeeeeeeccccceEEEeccccccccccccccc Confidence 00 00000000000 000000 00000000 00 01233332110000 Q ss_pred --------------------c---c------c----cccceeeeecCCCCCch--------hHHHHHHHHHHhcC---cc Q lcl|Aclame:pro 280 --------------------K---P------V----EDFELTNLTGGSDGTAP--------ESWANKFPLLANEG---GY 315 (569) Q Consensus 280 --------------------~---~------~----a~~~~~~LtGG~dg~~~--------~~~~~~l~~le~~~---~~ 315 (569) + . . .......|+||.|+..+ .+...++++|++.+ ++ T Consensus 398 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gG~d~~~~~~~~~~~~~~~~tg~~~~~~~e~~~i~ 477 (641) T protein:vir:10 398 AGDWGASALNRRYNLLRSTAGTTSFPAGAVTVGSKNNATHYYRLANGADYSASGALYNLSNVDIATAYELIEDPESQVID 477 (641) T ss_pred ccccccccccccccccccccccccccccccccCCCCcceeEEEeecCcccccccccccccchhHHHHHHHhhhhhhhccc Confidence 0 0 0 00112469999997642 34567777776654 44 Q ss_pred EEEecC------CCHHHHHHHHHHHHHHhcCCCeEEEEEcCCCCC---------CHHHHHHHhh-hcCCceEEEEeccce Q lcl|Aclame:pro 316 YLVPLT------DKQAVHSEALAFVKDRTDNGDPMRIIVGGGTNE---------TVEESITRAT-NLRDPRASLVGFSGT 379 (569) Q Consensus 316 ~i~~~~------~d~~v~~~l~~~v~~~~~~g~~~~~vv~~~~~~---------~~~~~~~~a~-~~n~~~v~~v~~~~~ 379 (569) .++++. ...+++.++.+||++|++ ||++++.+.+. ..+.++...+ .+++.+.++++||.. T Consensus 478 ~l~~~~~~~~~~~~~~v~~~~i~~ce~~~d----~~ailD~p~~~~~~~~~~~~~~~~~~~~~~~~~~s~yaa~y~P~~~ 553 (641) T protein:vir:10 478 YVLSGPAGADEAAAIAKATTITTIVESRKD----CMAFLSPLRSDVIGVSNTTTVTENLVNYFNQLPSSNYVVFDSGYKY 553 (641) T ss_pred eeeecCCCCCcchhHHHHHHHHHHHHhcCC----EEEEEcCCcccccCCCchhhHHHHHHHHHhhcCCCceEEEEeceeE Confidence 444432 236788999999998865 99999987543 1344444443 357889999999985 Q ss_pred e-ccCCcceeeechHHHHHHHHHHhhcCc----hhcCccce---ee-ccccccccCCHHHHHHHHhcCcEEEEEecCCcc Q lcl|Aclame:pro 380 R-KMDDGRLLKLPGYMMASQIAGIASGLE----VGEAITFK---HF-NVTSVDRVFESSQLDMLNESGVISIEFVRNRTL 450 (569) Q Consensus 380 ~-~~~~g~~~~~~~~~~aa~vAG~~A~~~----~~~s~T~~---~~-~~~~~~~~~t~~e~~~l~~~Gv~~l~~~~~~~~ 450 (569) . .+..++.+.+|++ +.+||++|+.| ++++|.|. .+ ++.++...+++.|++.|+++|+|||+.+.+ T Consensus 554 v~dp~~~~~~~vPps---G~iAGv~ArtD~~rGvwkAPAn~~~~~i~gv~~l~~~~~~~e~~~Lnp~gIN~ir~fpg--- 627 (641) T protein:vir:10 554 IYDKYNDVYRYVPCN---GDIAGLILETGLEEEPWFSPAGFQRGVLRNAVKLAYSPNKTQRDRLYANRINPVVSFPG--- 627 (641) T ss_pred eecccCCceeEecCC---HHHHHHHHhhhccCCceECcCCcccceeeeeeeeeEecChhHHhhhhhcccceEEecCC--- Confidence 4 3445666777775 89999999887 77899997 45 477999999999999999999999976543 Q ss_pred eEEEEeeceeccCCCC Q lcl|Aclame:pro 451 TAFRVVQDVTTYNDKS 466 (569) Q Consensus 451 ~~~ri~~~itT~~~~~ 466 (569) .+ +++.+-.|..+- T Consensus 628 ~G--~v~~~~~~~~~~ 641 (641) T protein:vir:10 628 HA--MINNNIAFHTKL 641 (641) T ss_pred ce--eecceeeeeecC Confidence 33 444443333221 No 47 >protein:vir:10336 Length: 386 # NCBI annotation: ORF39 # Family: family:all:115 # MgeID: mge:182 # MgeName: VHML # Cross-refs: genbank:acc:NP_758931;genbank:gi:27311206;genbank:GeneID:956116 Probab=100.00 E-value=3.8e-46 Score=269.61 Aligned_cols=361 Identities=17% Similarity=0.159 Sum_probs=254.0 Q ss_pred CCCccccCcceecCceEEEEEcCCCccccCCCCceEEEEeccCCC-----CCceeEEEcChHHHHHHhcC-cchHHHHHH Q lcl|Aclame:pro 1 MAVEQFPRKKVSRPHTEITVDTSGIGGSSSSSDKTLMLVGSAKGG-----KPDTVYRFRNYQQAKQVLRS-GDLLDAIEL 74 (569) Q Consensus 1 ma~~~~~~~~~~~PGvyi~~~~~~~~~~~~~~~~~~~~~g~a~~G-----~~~~~~~i~~~~~~~~~fg~-g~l~~~~~~ 74 (569) |+ .|.+|||||++.+++.+++..+++++.+|+|.+..+ |.++|++++++.++...||. +.|.++++. T Consensus 1 M~-------~~~~~Gv~v~ev~~~~~~i~~v~tav~~~vg~a~~a~~~~~~~~~pv~i~s~~~~~~~~g~~~tl~~a~~~ 73 (386) T protein:vir:10 1 MA-------EQYLHGAEVVEIDNGARPIRTAQSGVIGLVGTAPDADATAFPLNTPVLIAGSRREAAKLGAGGTLPQAIDG 73 (386) T ss_pred Cc-------cccCCCeEEEEcCCCcccccccCcceeEEEEecCCCCCcccccccceEecchHHHHhhcCCCcchhHHHHH Confidence 65 446899999999999999999999999999998765 77999999999999999986 457777777 Q ss_pred HhhhhhhhccCCceEEEEEcCCCccceeeccceEEEEecCCcccceeEEEEecCCCCcceEEEEEecCCceeeecccccc Q lcl|Aclame:pro 75 AWNASDVNTASAGDILAVRVEDAKNATLTKGGLTFASTIYGVDANEIQVALEDNNLTHTKRLTVAFSKDGYKKVFDNLGK 154 (569) Q Consensus 75 ~~~~~~~~~~g~~~~~~~rv~~~~~a~~~~~~l~~~a~~~G~~gn~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (569) .| .+|++.|+++++..+..+..+.. +.++. T Consensus 74 ~~------~~gg~~~~vv~~~~~~~~~~t~~--------------------------------------------~~ig~ 103 (386) T protein:vir:10 74 IF------DQTGAVVVVIRVDEGVDSAATQS--------------------------------------------NVIGK 103 (386) T ss_pred Hh------ccCceeEEEeeccccccccccch--------------------------------------------hhhcc Confidence 66 58899999988853222211100 00000 Q ss_pred eeEEEecCcccceeEEEEecCccceeeeeeeccccccccceeeeeccccccccceehhhhhhcccccceeEEecccCCcc Q lcl|Aclame:pro 155 IFSIQYKGSEAQANFTIAQDSISKKATTLTLNVGSEPESTTEVMKYELGQGVYSETNVLVSAINSLPDWEAKFFPIGDKN 234 (569) Q Consensus 155 ~~~v~~~G~~a~a~~~v~~~~~s~~~~~lt~~~~~~~~~~~~v~~~~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 234 (569) .+.. .+....+..+ .... T Consensus 104 --------------------------------~~~~-------------t~~~tgl~~l-------~~~~---------- 121 (386) T protein:vir:10 104 --------------------------------VDAD-------------TEQYTGILAL-------LSAE---------- 121 (386) T ss_pred --------------------------------cccc-------------cchhhhhHHh-------hhhc---------- Confidence 0000 0000000000 0000 Q ss_pred eecccccchhhccccccceeehhhhhhhhhhhccCceEEEEeccCccccccceeeeecCCCCCchhHHHHHHHHHHhcCc Q lcl|Aclame:pro 235 LPTDALEAVTKVDVKTEAVFVGALAGDIAKQLEYNDYVTVAVDATKPVEDFELTNLTGGSDGTAPESWANKFPLLANEGG 314 (569) Q Consensus 235 ~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~a~~~~~~LtGG~dg~~~~~~~~~l~~le~~~~ 314 (569) +. +. ..+ . ..+. ..+ T Consensus 122 ----------------------------------~~-~~--~~p-----~---i~~a--------p~~------------ 136 (386) T protein:vir:10 122 ----------------------------------NT-VK--VQP-----R---ILIA--------PGF------------ 136 (386) T ss_pred ----------------------------------cc-cc--ccc-----c---cccc--------ccc------------ Confidence 00 00 000 0 0000 000 Q ss_pred cEEEecCCCHHHHHHHHHHHHHHhcCCCeEEEEEcCCCCCCHHHHHHHhhhcCCceEEEEeccceec-cCCcceeeechH Q lcl|Aclame:pro 315 YYLVPLTDKQAVHSEALAFVKDRTDNGDPMRIIVGGGTNETVEESITRATNLRDPRASLVGFSGTRK-MDDGRLLKLPGY 393 (569) Q Consensus 315 ~~i~~~~~d~~v~~~l~~~v~~~~~~g~~~~~vv~~~~~~~~~~~~~~a~~~n~~~v~~v~~~~~~~-~~~g~~~~~~~~ 393 (569) ....++.+.+.+.+++++ .++ +......+.+++......+++.+.++++|+.... ..++....+|++ T Consensus 137 ------~~~~~v~~~l~~~~~~~~-----~~~-~~~~~~~~~~~a~~~~~~~~s~~~~~~~p~~~v~~~~~~~~~~~p~s 204 (386) T protein:vir:10 137 ------SNQKAVADQLVSVADTAA-----WLC-HSGWSNTTDAAAITYRELFGSRRCEVVDPWYKVWDVETSAHIIQPPS 204 (386) T ss_pred ------cchhHHHHHHHHhhcceE-----EEE-EeCCCCCchHHHHHhhhcccccceEEecCceeeeccccccceeechH Confidence 111233344444443321 223 3344566778888889999999999999987532 334455566654 Q ss_pred HHHHHHHHHhhcCc----hhcCccceeec-ccccccc------CCHHHHHHHHhcCcEEEEEecCCcceEEEEeeceecc Q lcl|Aclame:pro 394 MMASQIAGIASGLE----VGEAITFKHFN-VTSVDRV------FESSQLDMLNESGVISIEFVRNRTLTAFRVVQDVTTY 462 (569) Q Consensus 394 ~~aa~vAG~~A~~~----~~~s~T~~~~~-~~~~~~~------~t~~e~~~l~~~Gv~~l~~~~~~~~~~~ri~~~itT~ 462 (569) +++||++|..+ +++||.|+.+. +.++... .+..|.+.|+++|++++. .+.++|+|.+.|+ T Consensus 205 ---~~~ag~~a~~D~~~G~~~spaN~~l~gv~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~-----~~~G~~~wG~rT~- 275 (386) T protein:vir:10 205 ---ARHAGVMAKVHNTLGFWWSNSNQEILGIDGLCRPVDFKLDDPTCRANLLNAKEVTTTI-----QQNGFRVWGDRTC- 275 (386) T ss_pred ---HHHHHHHHHhhhcCCcEEccCCceeecccccceecccccccCcchhhhhhhcCcEEEE-----cCCCEEEEccccc- Confidence 78888888876 78899999985 5565543 357789999999999884 2346899999886 Q ss_pred CCCCchhhhhhhHHHHHHHHHHHHHHHHHhcCCcccCChHHHHHHHHHHHHHHHHHHhCCcccCCCcc-----ccEEecC Q lcl|Aclame:pro 463 NDKSDPVKNEMSVGEANDFLVSELKIELDNNFIGTKVIDTSASLIKNFIQSFLDNKKRAREIQDYTPE-----EVQVVLE 537 (569) Q Consensus 463 ~~~~d~~~~~i~v~R~~d~i~~~i~~~~~~~~iGk~nn~~~~~~v~~~i~~~L~~l~~~gaI~~~~~~-----d~~v~~~ 537 (569) +.|+.|++|++||++|+|+++|++.+ .+|++|||+..+|..|+..|+.||..||++|+|.||..+ +.+.++. T Consensus 276 --~~d~~~~~i~vrR~~~~i~~~~~~~~-~~~v~e~~~~~~~~~i~~~i~~~L~~l~~~g~l~g~~v~~d~~~nt~~~~~ 352 (386) T protein:vir:10 276 --SADSKWAFKNVVITNDMIADSLVRNH-LWAVDRNITKTYVEDVTEGVNNYLRHLKNIGAIAGGECWVDPELNSPDQIQ 352 (386) T ss_pred --CCCcccceeehhhHHHHHHHHHHHHH-HHhccCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeEEEEcccCCCHHHhh Confidence 45778999999999999999999987 589999999999999999999999999999999997431 2233567 Q ss_pred CCEEEEEEEEEEccceeEEEEEEEEEeeeeeC Q lcl|Aclame:pro 538 GDVASISMTVMPIRSLNKITVQLVYKQQILTA 569 (569) Q Consensus 538 ~d~~~v~~~v~pv~~~e~I~~ti~v~~~~~~~ 569 (569) ++++++++.++|+.|+|||.+++.+..+.++- T Consensus 353 ~G~~~~~i~~~p~~p~e~i~~~~~~~~~~~~~ 384 (386) T protein:vir:10 353 QGKVYFDYDFSAYAPAEHITFRSHMVNGYLTE 384 (386) T ss_pred CCeEEEEEEEEecCCceeEEEEEEEehhHHHh Confidence 89999999999999999999999999999888 No 48 >protein:vir:5833 Length: 742 # NCBI annotation: similar to tail sheath protein # Family: family:all:661 # MgeID: mge:123 # MgeName: RM 378 # Cross-refs: genbank:acc:NP_835619;genbank:gi:30044022 Probab=100.00 E-value=3.7e-36 Score=214.86 Aligned_cols=503 Identities=13% Similarity=0.138 Sum_probs=240.8 Q ss_pred CCCccccCcce----------------------------ecCceEEEEEcCCCcccc-----------CCCC---ceEEE Q lcl|Aclame:pro 1 MAVEQFPRKKV----------------------------SRPHTEITVDTSGIGGSS-----------SSSD---KTLML 38 (569) Q Consensus 1 ma~~~~~~~~~----------------------------~~PGvyi~~~~~~~~~~~-----------~~~~---~~~~~ 38 (569) +++..-+-.-| -.|=+|..+..-+..++. ..++ -+++ T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 234 (742) T protein:vir:58 156 LPSNIVPLFFYYEPYTGSITLQSSVNYSGLTLNYTVSKATTPWVYFAEYGTPTSSLTLYKGFYLEGIDLNSFNKQFVVS- 234 (742) T ss_pred eccccceeeeEeccccceEEEeeecccCCCcccceeeeeecCcccccccCCCccceeeeecccccccccCcccceeeEE- Confidence 22221111111 123333222211111110 0000 0111 Q ss_pred EeccCCCCCceeEEEcChH---HHHHHhcCcchHHHHHHHhhhhhhhccCCceEEEEEcCCCccceeeccceEEEEe--- Q lcl|Aclame:pro 39 VGSAKGGKPDTVYRFRNYQ---QAKQVLRSGDLLDAIELAWNASDVNTASAGDILAVRVEDAKNATLTKGGLTFAST--- 112 (569) Q Consensus 39 ~g~a~~G~~~~~~~i~~~~---~~~~~fg~g~l~~~~~~~~~~~~~~~~g~~~~~~~rv~~~~~a~~~~~~l~~~a~--- 112 (569) |--..-|....|++..|++ .|+.+-|-..-.+-|+ | ..-.+|-+++-|+.||-.. +++. ++++ T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~--~~~~~~~~~~~~~~~~~~~--~~~~-----~~~~~~~ 303 (742) T protein:vir:58 235 IENITVNREKGQVLYPSFDVVVHFRDIRGVSANTEYIR--F--RQVNLNPESPNYIERVIGN--MTFE-----FDGERIV 303 (742) T ss_pred EeeeeecccCCceeccceeEEEEEeeccCCCCCcccee--e--eeeecCCCCcceeeecccc--eeee-----eccceee Confidence 1011111222233333322 1222212100111121 0 0112355677777777321 1111 1111 Q ss_pred cCCcccce---eEEEEecCCCCcceEEEEEecCCceeeecccccceeEEEecCcccceeEEEEecCccceeeeeeecccc Q lcl|Aclame:pro 113 IYGVDANE---IQVALEDNNLTHTKRLTVAFSKDGYKKVFDNLGKIFSIQYKGSEAQANFTIAQDSISKKATTLTLNVGS 189 (569) Q Consensus 113 ~~G~~gn~---i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~G~~a~a~~~v~~~~~s~~~~~lt~~~~~ 189 (569) -.|.-=|+ +++.+....-.+- ... ...+.+.+.|.-+..-+.+..+........++-+... T Consensus 304 ~g~~~~n~~~~~~~~~~~~~~~~~---------~~~-------s~~~~~~~~~~~~v~d~~~~~~~~~~v~~~~t~~~~~ 367 (742) T protein:vir:58 304 TGGEYPNQVPFLRVVVSQDIKQNV---------AGV-------EKWVPVGFEGIYSVGDFTVIVNELTNVSIPVTDSAII 367 (742) T ss_pred ecccccccccceeeEeccccCcCc---------cce-------eEEEeccccccccccceeeeccccccceeeccccccC Confidence 12221132 4444432110000 000 0011111122222222222222111111111111100 Q ss_pred ccccceeeeeccccccccceehhhhhhcccccceeEEecccCCcceecccccchhhccccccceeehh-hhhhhhhhhcc Q lcl|Aclame:pro 190 EPESTTEVMKYELGQGVYSETNVLVSAINSLPDWEAKFFPIGDKNLPTDALEAVTKVDVKTEAVFVGA-LAGDIAKQLEY 268 (569) Q Consensus 190 ~~~~~~~v~~~~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 268 (569) +.......-.-.++.+..-.+. .+...++. +.....+... ..+.....+... ...+... .. T Consensus 368 pp~~~~~~e~v~~ngG~~f~v~-----s~~~~g~~----------i~~~~as~~~-s~ln~~~~V~Gt~aa~~~~d--~~ 429 (742) T protein:vir:58 368 PPMRFTRIEQITLSGGASFSVI-----SNQPYGFN----------IQDSRHSYWL-SPFKDDELIIGTELVLPALD--VS 429 (742) T ss_pred CcccccccceeecccCcceEEE-----EecccCcc----------eeccCcceEE-eccCCceEEEeehhhccccc--cc Confidence 0000000000000111000000 00000010 0000000000 000000000000 0000000 00 Q ss_pred CceEEEEeccCcccccc-ceeeeecCCCCCc-------------------hhHHHHHHHHHHhc-CccEEE-ecCCCHHH Q lcl|Aclame:pro 269 NDYVTVAVDATKPVEDF-ELTNLTGGSDGTA-------------------PESWANKFPLLANE-GGYYLV-PLTDKQAV 326 (569) Q Consensus 269 ~~~v~~~~~~~~~~a~~-~~~~LtGG~dg~~-------------------~~~~~~~l~~le~~-~~~~i~-~~~~d~~v 326 (569) ..+..- .....+... ....|.||.++.+ ..++ ..|.+|.+. ++.+++ +.-++... T Consensus 430 t~~~v~--s~~~alp~~a~sv~laGG~dg~v~v~~~~~D~iG~~~~~d~~~adr-TGL~ALlev~eVtILiAPG~t~~~v 506 (742) T protein:vir:58 430 TEFGVS--SWEEALPEFSFLMPFQGGSDGYIRVDENEPDTIGRVKITPALLANY-ERLLPLLTEDQFDLVLTPYLTFADH 506 (742) T ss_pred hheecc--ccccccceeeEEEeecCCccccccccCCCcccccccccccccccch-hHHHHhhhcCCCcEEEEcCCCchHH Confidence 000000 001111111 1233555555421 1123 345555544 444444 34466778 Q ss_pred HHHHHHHHHHHhcCCCeEEEEEcCCCCC-CHHHHHHHhhhcCCceEEEEeccceeccCCcceeeechHHHHHHHHHHhhc Q lcl|Aclame:pro 327 HSEALAFVKDRTDNGDPMRIIVGGGTNE-TVEESITRATNLRDPRASLVGFSGTRKMDDGRLLKLPGYMMASQIAGIASG 405 (569) Q Consensus 327 ~~~l~~~v~~~~~~g~~~~~vv~~~~~~-~~~~~~~~a~~~n~~~v~~v~~~~~~~~~~g~~~~~~~~~~aa~vAG~~A~ 405 (569) +..+.+||+.+++ ..++++..+... ..+++++....+++.+.++++||+.....++ ....|+ ++++||++|. T Consensus 507 ~aav~A~la~a~~---Rl~vL~D~P~~~tt~~~A~a~r~~~nSsraaly~PwVkv~d~~~-~r~vPp---SgaIAGL~AR 579 (742) T protein:vir:58 507 AGTVNAFINRAEN---RFLYLFDIAGDDDTENLAISLAGYINSSFATTFFPWVRRLTNKG-MRTVPA---SLAAYRSIRT 579 (742) T ss_pred HHHHHHHHHhhcC---CeEEEEecCCCCchHHHHHHHHhccCCceEEEEeceeeeccCCc-ceeech---HHHHHHHHHH Confidence 8899999988754 234444444433 4567788889999999999999976544433 344555 4788899888 Q ss_pred Cc----hhcCccceeeccccccccCCHHHHHHHHhcCcEEEEEecCCcceEEEEeeceeccCCCCchhhhhhhHHHHHHH Q lcl|Aclame:pro 406 LE----VGEAITFKHFNVTSVDRVFESSQLDMLNESGVISIEFVRNRTLTAFRVVQDVTTYNDKSDPVKNEMSVGEANDF 481 (569) Q Consensus 406 ~~----~~~s~T~~~~~~~~~~~~~t~~e~~~l~~~Gv~~l~~~~~~~~~~~ri~~~itT~~~~~d~~~~~i~v~R~~d~ 481 (569) .| +++||.|+.+.. ...+++.|++.|+++|+++++.. +.++|+|.+.|.. ..|+.|++|++||++|+ T Consensus 580 tD~erGvw~SPANrgii~---~~~~s~se~d~LN~~GINtIrsf----G~G~rlWGnRTla--ssDs~wryInVRRlfd~ 650 (742) T protein:vir:58 580 TDPETGLAPVGARRGVVT---GEPVRQVDWEDLYNNRINPIVRV----GNDVLLFGQKTML--NVNSALNRINVRRLLIV 650 (742) T ss_pred hccCCceEecCCcceeee---ccccchhhHHHHhhCCceEEEEC----CCcEEEEcceecC--CCCcccceEeehhhHHH Confidence 87 567888875532 22457889999999999999642 3479999998763 45779999999999999 Q ss_pred HHHHHHHHHHhcCCcccCChHHHHHHHHHHHHHHHHHHhCCcccCCCc----cccEEecCCCEEEEEEEEEEccceeEEE Q lcl|Aclame:pro 482 LVSELKIELDNNFIGTKVIDTSASLIKNFIQSFLDNKKRAREIQDYTP----EEVQVVLEGDVASISMTVMPIRSLNKIT 557 (569) Q Consensus 482 i~~~i~~~~~~~~iGk~nn~~~~~~v~~~i~~~L~~l~~~gaI~~~~~----~d~~v~~~~d~~~v~~~v~pv~~~e~I~ 557 (569) |+++|++.+ .+|++|||++.+|..|+..|+.||..||++|+|.||.. .+-+.+++++++++++.++|+.|||||. T Consensus 651 Ie~SI~~a~-q~~VfEPNd~~L~~sIk~sInafL~~L~aqGALlGfrV~lDetNTpeDI~~Gklvv~I~vAP~~PAEfI~ 729 (742) T protein:vir:58 651 MRNRISQIL-SSYLFENNTSENRLRAEALVRQYLESLRLRGAVTDYEVAIDSVTTPTDIDNNTLRARVTVQPARSIEYID 729 (742) T ss_pred HHHHHHHHH-HHhccCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeEEEEcCCCCHHHhhCCEEEEEEEEEccCCcceEE Confidence 999999886 68999999999999999999999999999999999742 2223356789999999999999999999 Q ss_pred EEEEEEeeeeeC Q lcl|Aclame:pro 558 VQLVYKQQILTA 569 (569) Q Consensus 558 ~ti~v~~~~~~~ 569 (569) ++++..+.+++= T Consensus 730 lrf~it~tga~F 741 (742) T protein:vir:58 730 ITFVITPTGVEI 741 (742) T ss_pred EEEEEEeccccc Confidence 999988887776 No 49 >protein:vir:489 Length: 498 # NCBI annotation: putative sheath protein # Family: family:all:369 # MgeID: mge:11 # MgeName: P27 # Cross-refs: genbank:acc:NP_543096;swissprot:trembl:q8w623;genbank:gi:18249908;uniprot:Q8W623;genbank:GeneID:929698 Probab=100.00 E-value=4.7e-36 Score=214.28 Aligned_cols=444 Identities=13% Similarity=0.150 Sum_probs=289.1 Q ss_pred CCCcccc-CcceecCceEEEEEcCCCccccCCCCceEEEEeccCCC---CCceeEEEcChHHHHHHhcCcchHHHHHHHh Q lcl|Aclame:pro 1 MAVEQFP-RKKVSRPHTEITVDTSGIGGSSSSSDKTLMLVGSAKGG---KPDTVYRFRNYQQAKQVLRSGDLLDAIELAW 76 (569) Q Consensus 1 ma~~~~~-~~~~~~PGvyi~~~~~~~~~~~~~~~~~~~~~g~a~~G---~~~~~~~i~~~~~~~~~fg~g~l~~~~~~~~ 76 (569) |..+.=. -.+..-||+|+||+.+........ .-+.+||...-+ ++++|++|.|.+|++..||-|-.+...-.+| T Consensus 1 M~IsF~~IP~~iRvP~~y~E~dns~A~~~~~~--qrvLiiGq~la~gt~~~~~~v~v~s~~~a~~~fG~GS~l~~M~~a~ 78 (498) T protein:vir:48 1 MTISFSAVPSDTLVPLFYAEMDNSAANTAVTS--APALLIGHASNDAAIEVNSLVLMPSADYARQICGAGSQLARMVDVY 78 (498) T ss_pred CCccccccCcccccceEEEEEecCCCccccCC--cceEEEeecCccccccccceEEecCHHHHHHhcCcccHHHHHHHHH Confidence 8887221 223344999999999876654443 346788885533 7799999999999999999776544333333 Q ss_pred hhhhhhccCCceEEEEEcCCCccceeeccceEEEEecCCcccceeEEEEecCCCCcceEEEEEecCCceeeeccccccee Q lcl|Aclame:pro 77 NASDVNTASAGDILAVRVEDAKNATLTKGGLTFASTIYGVDANEIQVALEDNNLTHTKRLTVAFSKDGYKKVFDNLGKIF 156 (569) Q Consensus 77 ~~~~~~~~g~~~~~~~rv~~~~~a~~~~~~l~~~a~~~G~~gn~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (569) .. .|--..++++=+.++ .+.+..+.++++-. ....+++.++-.+..+ T Consensus 79 ~~----~n~~~~l~~i~~~D~-ag~aA~g~it~tg~-----------------at~~G~l~l~Igg~~v----------- 125 (498) T protein:vir:48 79 RQ----TDPFGELYVIAVPEA-RGAAATVRVTVTGE-----------------AEESGTLSLYVGRSSV----------- 125 (498) T ss_pred HH----hCCCceeEEEeeCCc-ccceeEEEEEeccc-----------------ccCCceEEEEECCEEE----------- Confidence 21 345567898888764 23333333333221 1122223222211111 Q ss_pred EEEecCcccceeEEEEecCccceeeeeeeccccccccceeeeeccccccccceehhhhhhcccccce------------- Q lcl|Aclame:pro 157 SIQYKGSEAQANFTIAQDSISKKATTLTLNVGSEPESTTEVMKYELGQGVYSETNVLVSAINSLPDW------------- 223 (569) Q Consensus 157 ~v~~~G~~a~a~~~v~~~~~s~~~~~lt~~~~~~~~~~~~v~~~~l~~~~~~~~~~~~~~i~~~~~~------------- 223 (569) ...+..+.... .-...+.+.|+..+++ T Consensus 126 -------------------------~v~V~~gdTaa---------------~vA~al~aai~a~~~lPVTA~~~~~~Vtl 165 (498) T protein:vir:48 126 -------------------------QVPVVNGDDAT---------------AVATAIKEAVNGVITLPFAASSDAGVVTL 165 (498) T ss_pred -------------------------EEeecCCCCHH---------------HHHHHHHHHHhCCCCcceEEEecCcEEEE Confidence 01111110000 0001112223322222 Q ss_pred eEEecccCCcceecccccchhhccccccceeehhhhhhhhhhhccCceEEEE--ec--cCcccc--ccceeeeecCCCCC Q lcl|Aclame:pro 224 EAKFFPIGDKNLPTDALEAVTKVDVKTEAVFVGALAGDIAKQLEYNDYVTVA--VD--ATKPVE--DFELTNLTGGSDGT 297 (569) Q Consensus 224 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~--~~~~~a--~~~~~~LtGG~dg~ 297 (569) +|+--+.-++.+. +.+. .+ +....+ .++.+.++||+ T Consensus 166 TAr~kG~~GN~I~-----------------------------------l~~~~~~~~~ge~~p~Glt~~itamsgGa--- 207 (498) T protein:vir:48 166 TARHKGLYGNELP-----------------------------------VCLNYYGSGGGEILPAGLQVVTEAGTAGS--- 207 (498) T ss_pred Eeeecccccccce-----------------------------------eeeeeccCcccccccceeeEEEEcccCCc--- Confidence 2221111111100 1110 00 111111 22345677774 Q ss_pred chhHHHHHHHHHHhcCccEEEecCCCHHHHHHHHHHHHHHhc---CCCeEEEEEcCCCCCCHHHHHHHhhhcCCceEEEE Q lcl|Aclame:pro 298 APESWANKFPLLANEGGYYLVPLTDKQAVHSEALAFVKDRTD---NGDPMRIIVGGGTNETVEESITRATNLRDPRASLV 374 (569) Q Consensus 298 ~~~~~~~~l~~le~~~~~~i~~~~~d~~v~~~l~~~v~~~~~---~g~~~~~vv~~~~~~~~~~~~~~a~~~n~~~v~~v 374 (569) ...|++++|++|.+..+++|+++..|++-..++.+|+..++. --+.+.+++......++.+..+.....|+.++.+. T Consensus 208 g~PDia~aLaal~~~~~~~I~~p~~D~asl~al~~~L~~~sgRw~~~~q~~g~~~~a~~gT~~~l~t~g~~~N~~~it~~ 287 (498) T protein:vir:48 208 GAPDLTAAVAAMGDEAFDFIGLPFNDAASINMMMTEMNDSSGRWSYARQLYGHVYTAKLGTLSELVNAGDMHNQQHITLA 287 (498) T ss_pred cCcchHHHHHhhccCCccEEEEeecCHHHHHHHHHHHhhhhhhhhHHhhcCeEEEEeccCCHHHHHHhhhccCCceEEEE Confidence 344899999999999999999999999888999999986432 12345555555566789999999999999999876 Q ss_pred eccceeccCCcceeeechHHHHHHHHHHhh---cCchhcCccceeeccc---cccccCCHHHHHHHHhcCcEEEEEecCC Q lcl|Aclame:pro 375 GFSGTRKMDDGRLLKLPGYMMASQIAGIAS---GLEVGEAITFKHFNVT---SVDRVFESSQLDMLNESGVISIEFVRNR 448 (569) Q Consensus 375 ~~~~~~~~~~g~~~~~~~~~~aa~vAG~~A---~~~~~~s~T~~~~~~~---~~~~~~t~~e~~~l~~~Gv~~l~~~~~~ 448 (569) +... ..+.|++..|+..|++.| ..|+.+++..-.++++ ....+|+..|++.|+.+|+-.++- . T Consensus 288 ~~~~--------~~~~p~~~~AAa~a~~aA~~l~~DPArPLqtl~L~Gi~~p~~~~r~~~~ern~LL~~Gist~~V-~-- 356 (498) T protein:vir:48 288 GYEK--------ETQSPVDELVASRLAREAVFIRNDPARPTQTGELVGMLPAPKGKRFIMTEQQTLLSHGVATAYV-E-- 356 (498) T ss_pred ecCC--------CCCChHHHHHHHHHHHHHHhhhccccccccceeeeccccCCchhcCChHHHHHHHhcCcceEEE-c-- Confidence 4321 124577888888888887 7899999988888743 566789999999999999999964 2 Q ss_pred cceEEEEeeceeccC----CCCchhhhhhhHHHHHHHHHHHHHHHHHhcCCcccCChH-----------HHHHHHHHHHH Q lcl|Aclame:pro 449 TLTAFRVVQDVTTYN----DKSDPVKNEMSVGEANDFLVSELKIELDNNFIGTKVIDT-----------SASLIKNFIQS 513 (569) Q Consensus 449 ~~~~~ri~~~itT~~----~~~d~~~~~i~v~R~~d~i~~~i~~~~~~~~iGk~nn~~-----------~~~~v~~~i~~ 513 (569) ++.++|++.||||+ ...|+.|.+|.++|+++|+.+.+|..+..+|-+++.-++ +.+.||+++.. T Consensus 357 -~G~V~I~R~ITTY~~n~~G~~D~syLDi~T~~tl~yvr~~~r~~i~~kfpR~KLa~dg~~~~~gq~IvTp~~ir~eli~ 435 (498) T protein:vir:48 357 -GGTLRIQRSVTTYKKNAYGVADNSYLDSETLHTSAYVLRKLKSVITSKYGRHKLANDGTRFGPGQAIVTPAVIKGELLA 435 (498) T ss_pred -CCeEEEEeeeeeeeecCCCCcchhhhhhhhHHHHHHHHHHHHHHhhhhcCCceecccCcccCCCCcccchHHHHHHHHH Confidence 23589999999998 356899999999999999999999999999999876665 66889999999 Q ss_pred HHHHHHhCCcccCCCc--cccEEecCC---CEEEEEEEEEEccceeEEEEEEEEEeeeeeC Q lcl|Aclame:pro 514 FLDNKKRAREIQDYTP--EEVQVVLEG---DVASISMTVMPIRSLNKITVQLVYKQQILTA 569 (569) Q Consensus 514 ~L~~l~~~gaI~~~~~--~d~~v~~~~---d~~~v~~~v~pv~~~e~I~~ti~v~~~~~~~ 569 (569) .+++|+..|.+++++. +.+.|+++. +|+.+.+-...+..+.-+=.++.++=|.-+| T Consensus 436 ~y~~le~~given~~~~~~~LiVerd~~dpnRln~~~p~d~vn~L~V~A~~~~f~lq~~~~ 496 (498) T protein:vir:48 436 TYRQMERAGIVENYDLFKQYLIVERDADNPNRLNTLFPPDYVNQLRVFAVVNQFRLQYSEE 496 (498) T ss_pred HHHhhhhhccccChhhhcceeEEEECCCCCcEEEEEecccccCchhhhhhhhhhhhhhhhc Confidence 9999999999999875 567777653 4566665555566665555555555554444 No 50 >protein:vir:4517 Length: 498 # NCBI annotation: tail sheath protein # Family: family:all:369 # MgeID: mge:97 # MgeName: V # Cross-refs: genbank:acc:NP_599043;genbank:gi:19549001;genbank:GeneID:935236 Probab=100.00 E-value=9.6e-36 Score=212.57 Aligned_cols=455 Identities=15% Similarity=0.167 Sum_probs=286.6 Q ss_pred CCCcccc-CcceecCceEEEEEcCCCccccCCCCceEEEEeccCC-C--CCceeEEEcChHHHHHHhcCcchHHH-HHHH Q lcl|Aclame:pro 1 MAVEQFP-RKKVSRPHTEITVDTSGIGGSSSSSDKTLMLVGSAKG-G--KPDTVYRFRNYQQAKQVLRSGDLLDA-IELA 75 (569) Q Consensus 1 ma~~~~~-~~~~~~PGvyi~~~~~~~~~~~~~~~~~~~~~g~a~~-G--~~~~~~~i~~~~~~~~~fg~g~l~~~-~~~~ 75 (569) |..+.=. -.+..-||+|+||+.+.... .....-+.+||...- | ++++|++|.|.+|++..||-|..+.. .+.+ T Consensus 1 M~IsF~~IP~~iRvP~~y~E~dns~A~~--~~~~q~vLiiGq~la~gs~~~~~~v~v~s~~~a~~lfG~GSml~~M~~a~ 78 (498) T protein:vir:45 1 MTISFNTIPSNTLVPLFYAEMDNQAANT--AQDSGASLLIGHANNGAEIVANSLVLMPSADYARQICGAGSQLARMVEAY 78 (498) T ss_pred CCCchhhcCcccccCeEEEEEeCCCCCC--CCCCcceEEEEecCCccccccceeEEecCHHHHHHhcCcCcHHHHHHHHH Confidence 8888221 22334499999999876632 223344668887533 3 78999999999999999997765443 3333 Q ss_pred hhhhhhhccCCceEEEEEcCCCccceeeccceEEEEecCCcccceeEEEEecCCCCcceEEEEEecCCceeeecccccce Q lcl|Aclame:pro 76 WNASDVNTASAGDILAVRVEDAKNATLTKGGLTFASTIYGVDANEIQVALEDNNLTHTKRLTVAFSKDGYKKVFDNLGKI 155 (569) Q Consensus 76 ~~~~~~~~~g~~~~~~~rv~~~~~a~~~~~~l~~~a~~~G~~gn~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (569) .+ .|--..++++-+.++ .+.+..+.++++-.. ...+++.++-.+..+ T Consensus 79 ~~-----~n~~~~l~~i~~~d~-aG~aA~g~it~tg~a-----------------t~~G~l~l~Igg~~v---------- 125 (498) T protein:vir:45 79 RQ-----TDPFGELYVIAVPEA-TGAAATVTLTVTGEA-----------------TESGTVNVYVGRTRV---------- 125 (498) T ss_pred HH-----hCCcceEEEEeeCCc-ccceeEEEEEeeccc-----------------CCCcEEEEEECCEEE---------- Confidence 32 234457888888764 233333333332211 122223222211111 Q ss_pred eEEEecCcccceeEEEEecCccceeeeeeeccccccccceeeeeccccccccceehhhhhhcccccceeEEecccCCcce Q lcl|Aclame:pro 156 FSIQYKGSEAQANFTIAQDSISKKATTLTLNVGSEPESTTEVMKYELGQGVYSETNVLVSAINSLPDWEAKFFPIGDKNL 235 (569) Q Consensus 156 ~~v~~~G~~a~a~~~v~~~~~s~~~~~lt~~~~~~~~~~~~v~~~~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 235 (569) ...+..+.... .-...+...|+..+++...-....+. + T Consensus 126 --------------------------~v~V~~gdTaa---------------~vA~al~aaina~~~lPVTA~~~~~~-V 163 (498) T protein:vir:45 126 --------------------------QAPVTNGDNVT---------------TIASSIQDAINAVPTLPFTASSSAGV-V 163 (498) T ss_pred --------------------------EEEecCCCCHH---------------HHHHHHHHHHhCCCCCceEEEecCce-E Confidence 01111110000 00011222333322211110000000 0 Q ss_pred ecccccchhhccccccceeehhhhhhhhhhhccCce-EEEEe--c--cCcccc--ccceeeeecCCCCCchhHHHHHHHH Q lcl|Aclame:pro 236 PTDALEAVTKVDVKTEAVFVGALAGDIAKQLEYNDY-VTVAV--D--ATKPVE--DFELTNLTGGSDGTAPESWANKFPL 308 (569) Q Consensus 236 ~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-v~~~~--~--~~~~~a--~~~~~~LtGG~dg~~~~~~~~~l~~ 308 (569) +. ..+- +...+|+. +++.. . +....+ .++.+.++||. ...|++++|++ T Consensus 164 tl---------TAr~-------------kG~~GN~I~l~~~~~~~~~ge~~p~Glt~~itamagGa---g~PD~a~alaa 218 (498) T protein:vir:45 164 TL---------TARH-------------KGLCGNEIPVSLNYYGFGGGEVLPAGVQIAVATGTAGT---GAPVLTGAVAA 218 (498) T ss_pred EE---------Eeec-------------cCccccceeEEEeeccccccccccceeeEEEEccCCCc---cCchhHHHHHH Confidence 00 0000 00011111 11100 0 111111 12345677764 44589999999 Q ss_pred HHhcCccEEEecCCCHHHHHHHHHHHHHHhc---CCCeEEEEEcCCCCCCHHHHHHHhhhcCCceEEEEeccceeccCCc Q lcl|Aclame:pro 309 LANEGGYYLVPLTDKQAVHSEALAFVKDRTD---NGDPMRIIVGGGTNETVEESITRATNLRDPRASLVGFSGTRKMDDG 385 (569) Q Consensus 309 le~~~~~~i~~~~~d~~v~~~l~~~v~~~~~---~g~~~~~vv~~~~~~~~~~~~~~a~~~n~~~v~~v~~~~~~~~~~g 385 (569) |.+..+++|+++..|.+-..++.+|+..++. --+.+.+++......++.+..+.....|+.++.+.+... T Consensus 219 l~~~~~~~I~~p~~D~asL~al~~~L~~~sgRw~~~~q~~g~~~~a~~gT~~~l~t~g~~~N~~~it~~~~~~------- 291 (498) T protein:vir:45 219 MADEPFDYIGLPFNDTASVNTLVTEMNDTSGRWSYARQLYGHVYTAKTGTLSELVNAGDQFNQQHITLAGYEK------- 291 (498) T ss_pred hccCCccEEEEeeCCHHHHHHHHHHHhhhhhhhhHHhhcCeEEEEeccCCHHHHHHhhhccCCceEEEEecCC------- Confidence 9999999999999999988999999986432 123455555555667899999999999999998865321 Q ss_pred ceeeechHHHHHHHHHHhh---cCchhcCccceeeccc---cccccCCHHHHHHHHhcCcEEEEEecCCcceEEEEeece Q lcl|Aclame:pro 386 RLLKLPGYMMASQIAGIAS---GLEVGEAITFKHFNVT---SVDRVFESSQLDMLNESGVISIEFVRNRTLTAFRVVQDV 459 (569) Q Consensus 386 ~~~~~~~~~~aa~vAG~~A---~~~~~~s~T~~~~~~~---~~~~~~t~~e~~~l~~~Gv~~l~~~~~~~~~~~ri~~~i 459 (569) ...-|+++.||.+||..| ..|+.+++..-.+.++ ....+|+..|++.|+.+|+-+++- . +| .++|++.| T Consensus 292 -~~~sp~~~~AAa~aa~~A~~l~~DPArPL~tl~L~Gi~~p~~~~r~~~~ern~LL~~Gist~~V-~--~G-~V~I~R~I 366 (498) T protein:vir:45 292 -ETQTPADELAASRTARAAVFIRNDPARPTQTGELVGMLPAPKGKRFTMTEQQTLLSHGVATAYV-E--SG-VLRIQRDV 366 (498) T ss_pred -CCCChHHHHHHHHHHHHHHHhhcccccccCceeecceecCCchhcCChHHHHHHHhCCcceEEE-c--CC-eEEEEeee Confidence 123477888888888887 7899999988888743 556789999999999999999964 2 44 58999999 Q ss_pred eccC----CCCchhhhhhhHHHHHHHHHHHHHHHHHhcCCcccCChH-----------HHHHHHHHHHHHHHHHHhCCcc Q lcl|Aclame:pro 460 TTYN----DKSDPVKNEMSVGEANDFLVSELKIELDNNFIGTKVIDT-----------SASLIKNFIQSFLDNKKRAREI 524 (569) Q Consensus 460 tT~~----~~~d~~~~~i~v~R~~d~i~~~i~~~~~~~~iGk~nn~~-----------~~~~v~~~i~~~L~~l~~~gaI 524 (569) |||+ ...|+.|.+|.++|+++|+.+.+|..+..+|-+++.-++ +.+.||+++...+++|+..|.+ T Consensus 367 TTY~~n~~G~~D~syLDi~T~~tl~yvr~~~r~~i~~kfpR~KLa~dg~~~~~gq~IvTp~~ir~ell~~y~~le~~giv 446 (498) T protein:vir:45 367 TTYRKNAYGVADNSYLDSETLHTSAYVLRKLKSVITSKYGRHKLASDGTRFGPGQAIVTPAVIKGELLATYRQLERAGIV 446 (498) T ss_pred eeeeecCCCCcchhhhhhhhHHHHHHHHHHHHHHhhhhcCCeeecccCcccCCCCcccchHHHHHHHHHHHHhhhhhccc Confidence 9998 356899999999999999999999999999999886555 5688999999999999999999 Q ss_pred cCCCc--cccEEecCC---CEEEEEEEEEEccceeEEEEEEEEEeeeeeC Q lcl|Aclame:pro 525 QDYTP--EEVQVVLEG---DVASISMTVMPIRSLNKITVQLVYKQQILTA 569 (569) Q Consensus 525 ~~~~~--~d~~v~~~~---d~~~v~~~v~pv~~~e~I~~ti~v~~~~~~~ 569 (569) ++++. +.+.|+++. +|+.+.+-...+..+.-+=.++.++=|.-++ T Consensus 447 En~~~~~~~LiVerd~~dpnRln~~~p~d~vn~L~V~A~~~~f~lq~~~~ 496 (498) T protein:vir:45 447 ENYELFKQYLVVERDASVPNRLNTLFPPDYVNQLRVFAVVNQFRLQYSEE 496 (498) T ss_pred cChhhhcceeEEEECCCCCcEEEEEecccccCchhhhhhhhhhheehhhc Confidence 99875 567777653 4566655555566665544445444444444 No 51 >protein:vir:4463 Length: 498 # NCBI annotation: Tail Sheath protein # Family: family:all:369 # MgeID: mge:96 # MgeName: ST64B # Cross-refs: genbank:acc:NP_700386;genbank:gi:23505458;genbank:GeneID:955665 Probab=100.00 E-value=1.7e-35 Score=211.22 Aligned_cols=455 Identities=14% Similarity=0.167 Sum_probs=286.1 Q ss_pred CCCcccc-CcceecCceEEEEEcCCCccccCCCCceEEEEeccCC-C--CCceeEEEcChHHHHHHhcCcchHHH-HHHH Q lcl|Aclame:pro 1 MAVEQFP-RKKVSRPHTEITVDTSGIGGSSSSSDKTLMLVGSAKG-G--KPDTVYRFRNYQQAKQVLRSGDLLDA-IELA 75 (569) Q Consensus 1 ma~~~~~-~~~~~~PGvyi~~~~~~~~~~~~~~~~~~~~~g~a~~-G--~~~~~~~i~~~~~~~~~fg~g~l~~~-~~~~ 75 (569) |..+.=. -.+..-||+|+||+.+... ..... .-+.+||...- | ++++|++|.|.+|++..||-|..+.. .+.+ T Consensus 1 M~IsF~~IP~~iRvP~~y~E~dns~A~-~~~~~-q~vLiiGq~la~gs~~~~~~v~v~s~~~a~~~fG~GSml~~M~~a~ 78 (498) T protein:vir:44 1 MAISFNSIPSDTRVPLFYAEMDNSAAN-TARDS-GASLLIGHASNDASIAVNSLVLVSSVDYARQICGAGSQLARMVGAY 78 (498) T ss_pred CCCchhhcCcccccCeEEEEEeCCCCC-CCcCC-cceEEEEecCcccccccceeEeecCHHHHHHhcCcccHHHHHHHHH Confidence 9888221 2233349999999887652 22333 34567887543 3 77999999999999999997765443 3333 Q ss_pred hhhhhhhccCCceEEEEEcCCCccceeeccceEEEEecCCcccceeEEEEecCCCCcceEEEEEecCCceeeecccccce Q lcl|Aclame:pro 76 WNASDVNTASAGDILAVRVEDAKNATLTKGGLTFASTIYGVDANEIQVALEDNNLTHTKRLTVAFSKDGYKKVFDNLGKI 155 (569) Q Consensus 76 ~~~~~~~~~g~~~~~~~rv~~~~~a~~~~~~l~~~a~~~G~~gn~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (569) .+ .+.-..++++-+.++ ...+..+.++++-.. ...+++.++-.+..+ T Consensus 79 ~~-----~n~~~~l~~i~~~D~-aG~aAtg~it~tg~a-----------------t~~G~l~l~Igg~~v---------- 125 (498) T protein:vir:44 79 RK-----TDPFGELYVIAVPES-TGAAATVALTVTGEA-----------------TETGTVNVYTGRTRV---------- 125 (498) T ss_pred HH-----hCCCceeEEEecCCc-ccceeEEEEEeeccc-----------------CCCcEEEEEECCEEE---------- Confidence 32 345567888888764 233333344433221 122223222211111 Q ss_pred eEEEecCcccceeEEEEecCccceeeeeeeccccccccceeeeeccccccccceehhhhhhcccccceeEEecccCCcce Q lcl|Aclame:pro 156 FSIQYKGSEAQANFTIAQDSISKKATTLTLNVGSEPESTTEVMKYELGQGVYSETNVLVSAINSLPDWEAKFFPIGDKNL 235 (569) Q Consensus 156 ~~v~~~G~~a~a~~~v~~~~~s~~~~~lt~~~~~~~~~~~~v~~~~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 235 (569) ...+..+.... .-...+...|+..+++...-....+ .+ T Consensus 126 --------------------------~v~V~~gdTaa---------------~vA~al~aaina~~~lPVTA~~~~~-~v 163 (498) T protein:vir:44 126 --------------------------QAPVTSGDDAA---------------AVAVSIKDAVNANPDLPFTATSEAG-VV 163 (498) T ss_pred --------------------------EEEecCCCCHH---------------HHHHHHHHHHhCCCCCceEEeeccc-eE Confidence 01111110000 0001122233322221111000000 00 Q ss_pred ecccccchhhccccccceeehhhhhhhhhhhccCce-EEEEe--c--cCcc--ccccceeeeecCCCCCchhHHHHHHHH Q lcl|Aclame:pro 236 PTDALEAVTKVDVKTEAVFVGALAGDIAKQLEYNDY-VTVAV--D--ATKP--VEDFELTNLTGGSDGTAPESWANKFPL 308 (569) Q Consensus 236 ~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-v~~~~--~--~~~~--~a~~~~~~LtGG~dg~~~~~~~~~l~~ 308 (569) . ...|-| + ..+|+. +.+.. . +... .-.++.+.++|| ....|++++|++ T Consensus 164 t---------lTAr~k--------G-----~~GN~I~l~~~~~~~~~ge~~p~Glt~titamsgG---ag~PDia~alaa 218 (498) T protein:vir:44 164 T---------LTARHK--------G-----LYGNEIPVTLNYYGFGGGEVLPAGVNITVASGVKG---AGAPALNDAVAA 218 (498) T ss_pred E---------EEEecc--------C-----cccCcceEEEeeccCccccccccceeEEEEcccCC---ccCchhHHHHHh Confidence 0 000000 0 001110 11100 0 0111 112234566676 445589999999 Q ss_pred HHhcCccEEEecCCCHHHHHHHHHHHHHHhc---CCCeEEEEEcCCCCCCHHHHHHHhhhcCCceEEEEeccceeccCCc Q lcl|Aclame:pro 309 LANEGGYYLVPLTDKQAVHSEALAFVKDRTD---NGDPMRIIVGGGTNETVEESITRATNLRDPRASLVGFSGTRKMDDG 385 (569) Q Consensus 309 le~~~~~~i~~~~~d~~v~~~l~~~v~~~~~---~g~~~~~vv~~~~~~~~~~~~~~a~~~n~~~v~~v~~~~~~~~~~g 385 (569) |.+..+++|+++..|.+-..++.+|+..++. --+.+-+++......++.+..+.....|++++.+.+... T Consensus 219 l~~~~~~~i~~p~~D~asl~al~~~L~~~sgRw~~~~q~~g~~~~a~~gT~a~l~t~g~~~N~~~it~~~~~~------- 291 (498) T protein:vir:44 219 MGDEPFDYIGLPFNDTASVNSMATEMNDSSGRWSYVRQLYGHVYTAKTGTLSELVAAGDQFNLQHITLAGYEK------- 291 (498) T ss_pred hccCCccEEEEeecCHHHHHHHHHHHhhhhcchHHHhhcCeEEEEeccCCHHHHHHhhhccCCceEEEEecCC------- Confidence 9999999999999999888899999976432 223455555556677899999999999999998764311 Q ss_pred ceeeechHHHHHHHHHHhh---cCchhcCccceeeccc---cccccCCHHHHHHHHhcCcEEEEEecCCcceEEEEeece Q lcl|Aclame:pro 386 RLLKLPGYMMASQIAGIAS---GLEVGEAITFKHFNVT---SVDRVFESSQLDMLNESGVISIEFVRNRTLTAFRVVQDV 459 (569) Q Consensus 386 ~~~~~~~~~~aa~vAG~~A---~~~~~~s~T~~~~~~~---~~~~~~t~~e~~~l~~~Gv~~l~~~~~~~~~~~ri~~~i 459 (569) ...-|+++.||.+|+..| ..|+.+++..-.+.++ ....+|+..|++.|+.+|+-+++- . +| .++|++.| T Consensus 292 -~~~sp~~~~AAa~a~~aA~~l~~DPArPL~tl~L~Gi~~p~~~~r~~~~ern~LL~~Gist~~V-~--~G-~V~I~R~I 366 (498) T protein:vir:44 292 -DTQTPADELAASRTARAAVFIRNDPARPTQTGELVDMLPAPKGKRFTTTEQQTLLSHGVATAYV-E--SG-VLRIQRDI 366 (498) T ss_pred -CCCCHHHHHHHHHHHHHHHHhhcccccccCceeecccccCCchhcCChHHHHHHHhcCcceEEE-c--CC-eEEEEeee Confidence 112467888888888888 7899999988888643 556789999999999999999964 2 44 58999999 Q ss_pred eccC----CCCchhhhhhhHHHHHHHHHHHHHHHHHhcCCcccCChH-----------HHHHHHHHHHHHHHHHHhCCcc Q lcl|Aclame:pro 460 TTYN----DKSDPVKNEMSVGEANDFLVSELKIELDNNFIGTKVIDT-----------SASLIKNFIQSFLDNKKRAREI 524 (569) Q Consensus 460 tT~~----~~~d~~~~~i~v~R~~d~i~~~i~~~~~~~~iGk~nn~~-----------~~~~v~~~i~~~L~~l~~~gaI 524 (569) |||+ ...|+.|.+|.++|+++|+.+.+|..+..+|-+++.-++ +.+.||+++...+++|+..|.+ T Consensus 367 TTY~~n~~G~~D~syLDi~T~~tl~yvr~~~r~~i~~kfpR~KLa~d~~~~~~gq~IvTp~~ir~eli~~y~~le~~giv 446 (498) T protein:vir:44 367 TTYRKNAYGVADNSYLDSETLHTSAYVLRRLKSVITSKYGRHKLANDGTRFGSGQAIVTPAVIRGELGSTYRQMEREGIV 446 (498) T ss_pred eeeeecCCCCcchhhhhhhhHHHHHHHHHHHHHHhhhhcCCcccccCCcccCCCcccccHHHHHHHHHHHHHhhhhhccc Confidence 9998 356899999999999999999999999999999875443 5678999999999999999999 Q ss_pred cCCCc--cccEEecC---CCEEEEEEEEEEccceeEEEEEEEEEeeeeeC Q lcl|Aclame:pro 525 QDYTP--EEVQVVLE---GDVASISMTVMPIRSLNKITVQLVYKQQILTA 569 (569) Q Consensus 525 ~~~~~--~d~~v~~~---~d~~~v~~~v~pv~~~e~I~~ti~v~~~~~~~ 569 (569) ++++. +.+.|+++ ++|+.+.+-...+..+.-+=.++.++=|.-++ T Consensus 447 En~~~~~~~LiVerd~~dpnRln~~~p~d~vn~L~V~A~~~~f~lq~~~~ 496 (498) T protein:vir:44 447 ENFDLFQQHLIVERNANDSNRLDVLFPPDYVNQLRVFAVLNQFRLQYSEE 496 (498) T ss_pred cChhhhcceeEEEECCCCCcEEEEEecccccCchhhhhhhhhhhhhhhhh Confidence 99875 56777765 34565555555566665554555555444444 No 52 >protein:vir:1996 Length: 495 # NCBI annotation: major tail subunit # Family: family:all:369 # MgeID: mge:320 # MgeName: Mu # Cross-refs: genbank:acc:NP_050643;genbank:gi:9633530;genbank:GeneID:2636269 Probab=100.00 E-value=4.6e-34 Score=203.34 Aligned_cols=457 Identities=16% Similarity=0.204 Sum_probs=293.6 Q ss_pred CCCccccC--cceecCceEEEEEcCCCccccCCCCceEEEEeccC-CC--CCceeEEEcChHHHHHHhcCcchHHH-HHH Q lcl|Aclame:pro 1 MAVEQFPR--KKVSRPHTEITVDTSGIGGSSSSSDKTLMLVGSAK-GG--KPDTVYRFRNYQQAKQVLRSGDLLDA-IEL 74 (569) Q Consensus 1 ma~~~~~~--~~~~~PGvyi~~~~~~~~~~~~~~~~~~~~~g~a~-~G--~~~~~~~i~~~~~~~~~fg~g~l~~~-~~~ 74 (569) |+.-.|.. .+..-||+|+||+.+.....-.....-+.+||... .| ++++|++|.|.+|++..||-|..+.. ++. T Consensus 1 m~~i~F~~IP~~iRvP~~y~E~dns~A~~g~~~~~q~vLiiGq~la~gs~~~~~pv~v~s~~~a~~~fG~GS~la~M~~a 80 (495) T protein:vir:19 1 MSDISFNAIPSDVRVPLTYIEFDNSNAVSGTPAPRQRVLMFGQSGSKASAAPNVPVRIRSGSQASAAFGQGSMLALMADA 80 (495) T ss_pred CCCCchhhCCcccccCeEEEEEccCCCCcCCcCCCceEEEEEecCcccccccceeEEecCHHHHHHhcCcCcHHHHHHHH Confidence 88887743 34455999999999976654444455557888843 33 77999999999999999997764433 333 Q ss_pred HhhhhhhhccCCceEEEEEcCCCccceeeccceEEEEecCCcccceeEEEEecCCCCcceEEEEEecCCceeeecccccc Q lcl|Aclame:pro 75 AWNASDVNTASAGDILAVRVEDAKNATLTKGGLTFASTIYGVDANEIQVALEDNNLTHTKRLTVAFSKDGYKKVFDNLGK 154 (569) Q Consensus 75 ~~~~~~~~~~g~~~~~~~rv~~~~~a~~~~~~l~~~a~~~G~~gn~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (569) +.+ .|.-..++++=+.++ ...+..|.++++-.. ..++++..+-.+..+. T Consensus 81 ~~~-----~n~~~~l~~i~~~D~-aG~aA~g~it~tg~a-----------------t~~G~l~l~I~g~~v~-------- 129 (495) T protein:vir:19 81 FLN-----ANRVAELWCIPQGNG-TGNAAVGEISLSGTA-----------------GENGSLVTYIAGQRLA-------- 129 (495) T ss_pred HHH-----hCCcceEEEEeeCCh-hhceeEEEEEEeecC-----------------CCCcEEEEEECCEEEE-------- Confidence 332 355677899888764 233333444432221 1222333322221110 Q ss_pred eeEEEecCcccceeEEEEecCccceeeeeeeccccccccceeeeeccccccccceehhhhhhcccccce--eEEecccCC Q lcl|Aclame:pro 155 IFSIQYKGSEAQANFTIAQDSISKKATTLTLNVGSEPESTTEVMKYELGQGVYSETNVLVSAINSLPDW--EAKFFPIGD 232 (569) Q Consensus 155 ~~~v~~~G~~a~a~~~v~~~~~s~~~~~lt~~~~~~~~~~~~v~~~~l~~~~~~~~~~~~~~i~~~~~~--~~~~~~~~~ 232 (569) ..+..+.... +-...+...|+..+++ ++......+ T Consensus 130 ----------------------------v~V~~gdTaa---------------~vA~al~aaina~~~lPvTA~~~~~~~ 166 (495) T protein:vir:19 130 ----------------------------VSVAAGATGA---------------ALADLLVARIKGQPDLPVTAEVRADSG 166 (495) T ss_pred ----------------------------EEecCCCCHH---------------HHHHHHHHHhcCCccCceEEEeeccCC Confidence 0111110000 0001112223322221 111100000 Q ss_pred cceecccccchhhccccccceeehh-hhhhhhhhhccCceEEEEe-ccCcccc--ccceeeeecCCCCCchhHHHHHHHH Q lcl|Aclame:pro 233 KNLPTDALEAVTKVDVKTEAVFVGA-LAGDIAKQLEYNDYVTVAV-DATKPVE--DFELTNLTGGSDGTAPESWANKFPL 308 (569) Q Consensus 233 ~~~~~~~~d~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~v~~~~-~~~~~~a--~~~~~~LtGG~dg~~~~~~~~~l~~ 308 (569) +.. . ...+..++ ..+. ..+.+ +++.. .+....+ .++.+.++||. ...|++++|++ T Consensus 167 --------~~~-a----~~~VtlTAr~kG~----~n~id-i~~~~~~ge~~p~Glt~titamsgGa---g~PDia~alaa 225 (495) T protein:vir:19 167 --------DDD-T----HADVVLSAKFTGA----LSAVD-VRWNYYAGETTPYGIITAFKAASGKN---GNPDISASIAG 225 (495) T ss_pred --------CCc-C----ceeEEEEEeeccc----cccce-eEEEeecccccccceeEEEEecCCCC---CCcchHHHHHH Confidence 000 0 00000000 0000 00000 11111 1111111 22345677775 44589999999 Q ss_pred HHhcCccEEEecCCCHHHHHHHHHHHHHHhcCCCeEEEEEcCCCCCCHHHHHHHhhhcCCceEEEEeccceeccCCccee Q lcl|Aclame:pro 309 LANEGGYYLVPLTDKQAVHSEALAFVKDRTDNGDPMRIIVGGGTNETVEESITRATNLRDPRASLVGFSGTRKMDDGRLL 388 (569) Q Consensus 309 le~~~~~~i~~~~~d~~v~~~l~~~v~~~~~~g~~~~~vv~~~~~~~~~~~~~~a~~~n~~~v~~v~~~~~~~~~~g~~~ 388 (569) |.+..+++|+++.+|.+-..+|.+|++.+..--+++-+++......++.+..+.....|+.++.+.+-. + - T Consensus 226 l~~~~~~~I~~P~tD~asL~al~~~l~~rw~~~~q~~g~~~~a~~gT~~~l~t~g~~~N~~~it~~~~~-------g--s 296 (495) T protein:vir:19 226 MGDLQYKYIVMPYTDEPNLNLLRTELQERWGPVNQADGFAVTVLSGTYGDISTFGVSRNDHLISCMGIA-------G--A 296 (495) T ss_pred hccCCCcEEEEecCcHHHHHHHHHHHHHhhhHHHhcCeEEEEeecCCHHHHHHhhhccCCceEEEEecC-------C--C Confidence 999999999999999988899999999877655556666655667799999999999999999886431 1 1 Q ss_pred eechHHHHHHHHHHhh---cCchhcCccceeeccc---cccccCCHHHHHHHHhcCcEEEEEecCCcceEEEEeeceecc Q lcl|Aclame:pro 389 KLPGYMMASQIAGIAS---GLEVGEAITFKHFNVT---SVDRVFESSQLDMLNESGVISIEFVRNRTLTAFRVVQDVTTY 462 (569) Q Consensus 389 ~~~~~~~aa~vAG~~A---~~~~~~s~T~~~~~~~---~~~~~~t~~e~~~l~~~Gv~~l~~~~~~~~~~~ri~~~itT~ 462 (569) .-|+++.||.+|+..| ..|+.+++..-.++++ ....+|+..|++.|+.+|+-+++.. .++.++|++.|||| T Consensus 297 p~~~~~~AAA~aa~~A~~l~~DPArPL~tl~L~Gi~~p~~~~r~~~~ern~LL~~Gist~~V~---~~G~V~I~R~ITTY 373 (495) T protein:vir:19 297 PEPSYLYAATLCAVASQALSIDPARPLQTLTLPGRMPPAVGDRFTWSERNALLFDGISTFNVN---DGGEMQIERMITMY 373 (495) T ss_pred CCcHHHHHHHHHHHHHHHhhcccccccCceeecceecCCccccCChHHHHHHHhCCcceEEEC---CCCeEEEEeeeeee Confidence 2367777777766655 7899999998888743 5667899999999999999999752 34468999999999 Q ss_pred CC----CCchhhhhhhHHHHHHHHHHHHHHHHHhcCCcccCChH-----------HHHHHHHHHHHHHHHHHhCCcccCC Q lcl|Aclame:pro 463 ND----KSDPVKNEMSVGEANDFLVSELKIELDNNFIGTKVIDT-----------SASLIKNFIQSFLDNKKRAREIQDY 527 (569) Q Consensus 463 ~~----~~d~~~~~i~v~R~~d~i~~~i~~~~~~~~iGk~nn~~-----------~~~~v~~~i~~~L~~l~~~gaI~~~ 527 (569) +. ..|+.|..|.+.++++|+.+.+|..+..+|-+++.-++ +-..||+++...+++|+..|.++++ T Consensus 374 ~~n~~G~~D~syLDi~T~~tl~yvr~~~r~~i~~kfpR~KLa~d~~~~~~gq~IvTp~~ir~ell~~~~~le~~given~ 453 (495) T protein:vir:19 374 RTNKYGDSDPSYLNVNTIATLSYLRYSLRTRITQKFPNYKLASDGTRFATGQAVVTPSVIKTELLALFEEWENAGLVEDF 453 (495) T ss_pred eecCCCCcchhhhhhHHHHHHHHHHHHHHHHHhhhcCCcccccCCCCCCCcccccChHHHHHHHHHHHHhhhhhccccCh Confidence 64 46899999999999999999999999999999876554 5578999999999999999999998 Q ss_pred Cc--cccEEecCC---CEEEEEEEEEEccceeEEEEEEEEEe Q lcl|Aclame:pro 528 TP--EEVQVVLEG---DVASISMTVMPIRSLNKITVQLVYKQ 564 (569) Q Consensus 528 ~~--~d~~v~~~~---d~~~v~~~v~pv~~~e~I~~ti~v~~ 564 (569) +. +.+.|+++. +|+.+.+-...+..+.-+=.++.++= T Consensus 454 ~~~~~~LiVerd~~dpnRln~~~p~d~vn~L~V~A~~i~f~L 495 (495) T protein:vir:19 454 DTFKEELYVARNKDDKDRLDVLCGPNLINQFRIFAAQVQFIL 495 (495) T ss_pred hhhcceeEEEECCCCCcEEEEEecceeeCceeeeeeeeeeeC Confidence 75 566777653 56766666666666666655555555 No 53 >protein:vir:101326 Length: 529 # NCBI annotation: gp22 # Family: family:all:9453 # MgeID: mge:1512 # MgeName: P1 # Cross-refs: genbank:acc:YP_006525;genbank:gi:46401679;genbank:GeneID:2777386 Probab=99.91 E-value=5.4e-24 Score=148.13 Aligned_cols=474 Identities=13% Similarity=0.072 Sum_probs=272.5 Q ss_pred CCC---ccccCcceecCceEEEEEc--CCCccccCCCCceEEEEeccCCCCCceeEEEc--ChHHHHHHhcC---cchHH Q lcl|Aclame:pro 1 MAV---EQFPRKKVSRPHTEITVDT--SGIGGSSSSSDKTLMLVGSAKGGKPDTVYRFR--NYQQAKQVLRS---GDLLD 70 (569) Q Consensus 1 ma~---~~~~~~~~~~PGvyi~~~~--~~~~~~~~~~~~~~~~~g~a~~G~~~~~~~i~--~~~~~~~~fg~---g~l~~ 70 (569) |.- ..+.|| +-||=|+... .-.+...+.+.++.++||.+.+|++++|+.++ +|+++.-.+++ |-+.+ T Consensus 1 ~~~ysi~q~ig~---aSGvav~pi~~d~t~~~~~g~g~~v~a~Vgif~RG~i~k~~~Vt~~n~~~~LGep~~~~~ga~~E 77 (529) T protein:vir:10 1 MSQYSIQQSLGN---ASGVAVSPINADATLSTGVALNSSLWAGIGVFARGKPFTVLAVTESNYEDVLGEPLKPSSGSQFE 77 (529) T ss_pred CCceehhhhhhh---hcccccCCcCcccccchheecCceEEEEEEEeecCCCcceEEEchhHHHHHhccccCCCcchhhh Confidence 321 111222 3677776443 22344556688999999999999999999998 66655444432 44455 Q ss_pred HHHHHhhhhhhhccCCceEEEEEcC--CCccceee--------ccceEEEEecCCcccceeEEEEecCCC--CcceEEEE Q lcl|Aclame:pro 71 AIELAWNASDVNTASAGDILAVRVE--DAKNATLT--------KGGLTFASTIYGVDANEIQVALEDNNL--THTKRLTV 138 (569) Q Consensus 71 ~~~~~~~~~~~~~~g~~~~~~~rv~--~~~~a~~~--------~~~l~~~a~~~G~~gn~i~v~~~~~~~--~~~~~~~~ 138 (569) ++++-|.+ .+++ .|||+|+. +++..... ...+-+.++..+.||+.+.|-+++... ....++++ T Consensus 78 ~~~h~~eA----~~~~-s~yVVRvv~~dak~p~i~~~~~~~~~~s~~~~s~~~~l~~G~~~~iy~~Dgd~~~s~~~~l~i 152 (529) T protein:vir:10 78 PIRHVYEA----IQQT-SGYVVRAVPDDAKFPIIMFDESGEPAYSALPYGSEIELDSGEAFAIYVDDGDPCISPTRELTI 152 (529) T ss_pred hHhhhhhh----hcCC-ceEEEEEcccccCCceEEecCCccchhhcccccccccccccceEEEEEecCcCccCCceEEEE Confidence 55544432 3444 59999984 33322211 235678888889999999888876542 22333333 Q ss_pred EecCCceeeecccccceeEEEecCcccceeEEEEecCccceeeeeeeccccccccceeeeeccccccccceehhhhhhcc Q lcl|Aclame:pro 139 AFSKDGYKKVFDNLGKIFSIQYKGSEAQANFTIAQDSISKKATTLTLNVGSEPESTTEVMKYELGQGVYSETNVLVSAIN 218 (569) Q Consensus 139 ~~~~~~~~~~~~~~~~~~~v~~~G~~a~a~~~v~~~~~s~~~~~lt~~~~~~~~~~~~v~~~~l~~~~~~~~~~~~~~i~ 218 (569) .... ..+..++-..+.++-.-. .+.....+..+..+..+ . .+++. T Consensus 153 ~~~~---ads~g~e~~~l~~~~~~~--------~g~~~~let~~~sl~~~-----------------a-------~dd~G 197 (529) T protein:vir:10 153 ETAT---ADSAGNERFLLKLTQTTS--------LGVVTTLETHTVSLAEE-----------------A-------KDDMG 197 (529) T ss_pred Eeec---cccCCCccceeeEEEEee--------cCCceEEEEEEeeeeec-----------------h-------hhhcC Confidence 2110 000111111111110000 00000000000001000 0 00110 Q ss_pred cccceeEEecccCCcceecccccchhhccccccceeehhhhhhhhhhhccCceEEEEeccCccccccceeeeecCCCCCc Q lcl|Aclame:pro 219 SLPDWEAKFFPIGDKNLPTDALEAVTKVDVKTEAVFVGALAGDIAKQLEYNDYVTVAVDATKPVEDFELTNLTGGSDGTA 298 (569) Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~a~~~~~~LtGG~dg~~ 298 (569) ...-+. .....+ +..+.++....+. .+-++.......|+||+||.- T Consensus 198 ~~~yl~-svle~~-----s~~l~ai~~~e~~----------------------------~t~~~~t~~d~~f~~GtdG~~ 243 (529) T protein:vir:10 198 RLCYLP-TALEAR-----SKYLRAVVNEELI----------------------------STAKVTNKKSLAFTGGTNGDQ 243 (529) T ss_pred Cccchh-HHHhhc-----cCceeeeeeeccc----------------------------cccchhhhhhhhccCCccccc Confidence 000000 000000 0000000000000 000111111236899999864 Q ss_pred ----hhHHHHHHHHHHhcCccEEEe--cC-CCHHHHHHHHHHHHHHhcCCCeEEEEEcCCCCCCHHHHHHHhhhcCC--- Q lcl|Aclame:pro 299 ----PESWANKFPLLANEGGYYLVP--LT-DKQAVHSEALAFVKDRTDNGDPMRIIVGGGTNETVEESITRATNLRD--- 368 (569) Q Consensus 299 ----~~~~~~~l~~le~~~~~~i~~--~~-~d~~v~~~l~~~v~~~~~~g~~~~~vv~~~~~~~~~~~~~~a~~~n~--- 368 (569) +++|..++.+|++-.+++..+ +. -+.++-++|...|.+.+ +.++...++..++++++.....++- T Consensus 244 ~~i~s~~y~~A~~~L~n~p~d~~~il~~g~y~~a~I~~L~~ic~~~~-----~d~f~DV~~~LT~~aA~~~~e~~gl~~~ 318 (529) T protein:vir:10 244 SKISTAAYLRAVKVLNNAPYMYTAVLGLGCYDNAAITALGKICADRL-----IDGFFDVKPTLTYAEALPAVEDTGLLGT 318 (529) T ss_pred cccchHHHHHHHHHhcCCcceeeeeeccCCccHHHHHHHHHHHhhhh-----hcEEEcCCCCcCHHHHHHHHHhcCcccc Confidence 368999999998776655433 33 36777788888885432 5566788899999999988777664 Q ss_pred ceE---EEEeccceeccCCcceeeechHHHHHHHHHHhh------cCchhcCccce---eeccccccccCCHH--HHHHH Q lcl|Aclame:pro 369 PRA---SLVGFSGTRKMDDGRLLKLPGYMMASQIAGIAS------GLEVGEAITFK---HFNVTSVDRVFESS--QLDML 434 (569) Q Consensus 369 ~~v---~~v~~~~~~~~~~g~~~~~~~~~~aa~vAG~~A------~~~~~~s~T~~---~~~~~~~~~~~t~~--e~~~l 434 (569) +++ .+.+|.....+..|....++.+-. |++|+.-. -.+.|.+|..+ .++-.++.+.++.+ |.++| T Consensus 319 ~~~~~s~y~~P~~~~D~~tg~k~~~GlsG~-A~~akargv~~na~v~g~hY~pAGe~r~~inr~~I~~ly~~d~~e~~~l 397 (529) T protein:vir:10 319 DYVSCSVYHYPFSCKDKWTQSRVVFGLSGV-AYAAKARGVKKNSDVGGWHYSPAGEERAVIARASIQPLYPEDTPDEEAM 397 (529) T ss_pred CceeeEEEEcceeeccccccCceeeCCCcc-eeeccccceeecccccccccccCCCccceeecccceeccCCCccCHHHH Confidence 333 455666666666666555554421 34443221 12246777665 24445777777655 45678 Q ss_pred HhcCcEEEEEecCCcceEEEEeeceeccCCCCchhhhhhhHHHHHHHHHHHHHHHHHhcCCcccCChHHHHHHHHHHHHH Q lcl|Aclame:pro 435 NESGVISIEFVRNRTLTAFRVVQDVTTYNDKSDPVKNEMSVGEANDFLVSELKIELDNNFIGTKVIDTSASLIKNFIQSF 514 (569) Q Consensus 435 ~~~Gv~~l~~~~~~~~~~~ri~~~itT~~~~~d~~~~~i~v~R~~d~i~~~i~~~~~~~~iGk~nn~~~~~~v~~~i~~~ 514 (569) ..+.+|++.... ++...|...+|.+. +|..||+++++++|..|.+.+-+.. .+...+|+....|. ++.-+..+ T Consensus 398 v~~riNPV~~~~---~g~~~idDsLt~~~--knny~R~~hv~~lmn~I~~~~~k~a-~~~~~~Pd~it~~g-l~~~l~~~ 470 (529) T protein:vir:10 398 VKGRLNKVSVGT---SGQMIIDDALTCCT--QDNYLHFQHVPSLMNAISRFFVQLA-RQMKHSPDGITAAG-LTKGMTKL 470 (529) T ss_pred HhhccCeeeeec---cCcceeeeeeceee--eCCchhhhhHHHHHHHHHHHHHHHH-HHHhhCCChHHHHH-HHHhHHHH Confidence 889999887632 33344567788766 5889999999999999999998864 57788898888888 89999999 Q ss_pred HHHHHhCCcccCCC-c-------cccEEe-cCCCEEEEEEEEEEccceeEEEEEEEEEe Q lcl|Aclame:pro 515 LDNKKRAREIQDYT-P-------EEVQVV-LEGDVASISMTVMPIRSLNKITVQLVYKQ 564 (569) Q Consensus 515 L~~l~~~gaI~~~~-~-------~d~~v~-~~~d~~~v~~~v~pv~~~e~I~~ti~v~~ 564 (569) |+.+++.|+|.... | --++|. .+-|++.+++++.|.-....|++.=+.-- T Consensus 471 L~r~~asgalv~prdp~~~G~epy~~~V~q~d~D~~~v~~~~~ptGv~Rri~~~p~l~~ 529 (529) T protein:vir:10 471 LDRFVASGALVAPRDPDADGTEPYVLKVTQAEFDKWEVVWACCPTGVARRIQGVPLLIK 529 (529) T ss_pred HHHHHhcCceecccCccCCCCCceEEEEeecccCeEEEEEEeecCCceeeEEeeeeecC Confidence 99999999998643 2 123343 46799999999999999998887543322 No 54 >protein:vir:95263 Length: 450 # NCBI annotation: Phage conserved protein # Family: family:all:396 # MgeID: mge:1561 # MgeName: Felix 01 # Cross-refs: genbank:acc:NP_944896;genbank:gi:38707836;genbank:GeneID:2744049 Probab=99.20 E-value=6.4e-10 Score=70.99 Aligned_cols=420 Identities=11% Similarity=0.110 Sum_probs=214.5 Q ss_pred cccCcceecCceEEEEEcC-CCccccCCCCceEEEEeccCCCCCceeEEEcChHHHHHHhcCc-chHHHHHHHhhhhhhh Q lcl|Aclame:pro 5 QFPRKKVSRPHTEITVDTS-GIGGSSSSSDKTLMLVGSAKGGKPDTVYRFRNYQQAKQVLRSG-DLLDAIELAWNASDVN 82 (569) Q Consensus 5 ~~~~~~~~~PGvyi~~~~~-~~~~~~~~~~~~~~~~g~a~~G~~~~~~~i~~~~~~~~~fg~g-~l~~~~~~~~~~~~~~ 82 (569) -|. + -|++..+ ...++...+.+.+.|+|... -|++++...++.++...-||.. +.+.+...+|+- T Consensus 1 ~~s------~--iVnV~i~~~~~a~~~~~f~~~l~~~~~~-~~~~r~~~yss~~~V~~~FG~~S~ey~aA~~yF~q---- 67 (450) T protein:vir:95 1 MWN------P--IVNVDITLNTAGTTREGFGLPLFLASTD-NFEERVRGYTSLTEVAEDFDENTAAYKAAKQLWSQ---- 67 (450) T ss_pred CCC------c--eEEEeecccccccccccceeEEEEcCCC-CCccceeeecCHHHHHHhcCCCcHHHHHHHHHHhC---- Confidence 221 1 1333332 23455566677777887654 5778888999999999999964 577788888863 Q ss_pred ccCCceEEEEEcCCCccceeeccceEEEEecCCcccceeEEEEecCCCCcceEEEEEecCCceeeecccccceeEEEecC Q lcl|Aclame:pro 83 TASAGDILAVRVEDAKNATLTKGGLTFASTIYGVDANEIQVALEDNNLTHTKRLTVAFSKDGYKKVFDNLGKIFSIQYKG 162 (569) Q Consensus 83 ~~g~~~~~~~rv~~~~~a~~~~~~l~~~a~~~G~~gn~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~G 162 (569) ..-++++|+.|-+....+....+. ++ ...++.++++ T Consensus 68 ~p~p~~l~igr~~~~~t~~~~~~~---~~-----------------~~~g~lt~tv------------------------ 103 (450) T protein:vir:95 68 TPKVTQLYIGRRAMQYTVSIPDAV---TE-----------------STDYSITVAA------------------------ 103 (450) T ss_pred CCcccEEEEEeeccchhhhhhhhh---cc-----------------ccceeEEEEe------------------------ Confidence 234777899886432212111110 00 0011111110 Q ss_pred cccceeEEEEecCccceeeeeeeccccccccceeeeeccccccccceehhhhhhcccccceeEEecccCCcceecccccc Q lcl|Aclame:pro 163 SEAQANFTIAQDSISKKATTLTLNVGSEPESTTEVMKYELGQGVYSETNVLVSAINSLPDWEAKFFPIGDKNLPTDALEA 242 (569) Q Consensus 163 ~~a~a~~~v~~~~~s~~~~~lt~~~~~~~~~~~~v~~~~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~d~ 242 (569) ++..+....+.+.....-........-.+.. .. .+. ..++....+.+.. T Consensus 104 -----------~G~~~~~~~i~~s~a~s~~~va~~~~tai~~--~~-------~~~--~~~~~~s~g~~~~--------- 152 (450) T protein:vir:95 104 -----------GGGISQPYQYTAQSSDTAENVLQQFKTQIEA--DP-------TIK--DKVSVNVTGSNGS--------- 152 (450) T ss_pred -----------cceeeeeeEEEEEecCChhhHHHHhhhhhcc--cc-------eee--eeeeeeeecccce--------- Confidence 1000000000000000000000000000000 00 000 0000000000000 Q ss_pred hhhccccccceeehhhhhhhhhhhccCceEEEEeccCccccccceeeeecCCCCCchhHHHHHHHHHHhcC--ccEEEec Q lcl|Aclame:pro 243 VTKVDVKTEAVFVGALAGDIAKQLEYNDYVTVAVDATKPVEDFELTNLTGGSDGTAPESWANKFPLLANEG--GYYLVPL 320 (569) Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~a~~~~~~LtGG~dg~~~~~~~~~l~~le~~~--~~~i~~~ 320 (569) .... +...... .... +.......+.+|.+. +...++++++.+.. ++.+... T Consensus 153 -~t~~------~~~~~~~---------~~~~--------l~~~~~~~~~~g~~a---et~~~a~~a~~~~~~~w~~~~~~ 205 (450) T protein:vir:95 153 -ATMI------IAKAGDN---------DFVK--------VTTTAQTVYIASTTA---DTASTALAAIEAYSTDWYFIAAE 205 (450) T ss_pred -eeee------eeccccc---------hhhc--------cccccceeEeccccc---ccHHHHHHHHHHhhCCeEEEEec Confidence 0000 0000000 0000 011112233444433 34567778777664 4444444 Q ss_pred CCCHHHHHHHHHHHHHHhcCCCeEEEEEcCCCCCC-------HHHHHHHhhhcCCceEEEEeccceeccCCcceeeechH Q lcl|Aclame:pro 321 TDKQAVHSEALAFVKDRTDNGDPMRIIVGGGTNET-------VEESITRATNLRDPRASLVGFSGTRKMDDGRLLKLPGY 393 (569) Q Consensus 321 ~~d~~v~~~l~~~v~~~~~~g~~~~~vv~~~~~~~-------~~~~~~~a~~~n~~~v~~v~~~~~~~~~~g~~~~~~~~ 393 (569) ..+.+...++.+|++.. .++++....+.... ...+...-+.-++.|.+.++... -+.. T Consensus 206 ~~~~~~i~a~a~w~~a~----~~~f~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~t~~~y~~~-----------~~~~ 270 (450) T protein:vir:95 206 DRTQQFVLAMASEIQAR----KKIFFTANSDVTALQGTELASANDVPAQLAKNMYTRTVCLWHHA-----------AAED 270 (450) T ss_pred CCCHHHHHHHHHHHhhc----CcEEEEEcCCchhhhhhhhhcccchHHHHHhccCCeeEEEeeCC-----------Cchh Confidence 45566778899999864 24566554443221 11122333444555655443210 1122 Q ss_pred HHHHHHHHHhhcCchh-cCccceeecccccc------ccCCHHHHHHHHhcCcEEEEEecCCcceEEEEeeceeccCCCC Q lcl|Aclame:pro 394 MMASQIAGIASGLEVG-EAITFKHFNVTSVD------RVFESSQLDMLNESGVISIEFVRNRTLTAFRVVQDVTTYNDKS 466 (569) Q Consensus 394 ~~aa~vAG~~A~~~~~-~s~T~~~~~~~~~~------~~~t~~e~~~l~~~Gv~~l~~~~~~~~~~~ri~~~itT~~~~~ 466 (569) .+.++++|......+. .++.||.++++... +.|+..|.+.|.++|.+++.+..+. -.+.+++++- T Consensus 271 ~~~aa~~g~~~~~~~g~~T~~fk~l~Gv~~~v~~~~~~~lt~~~~~al~~~~~n~y~~~~~~----~~~~~G~~~~---- 342 (450) T protein:vir:95 271 YPEMAYIAYGAPYDAGSIAWGNAQLTGVAASLQPSNQRPLTSIQKSALDVRHCNFIDLDGGV----PVVRRGITSG---- 342 (450) T ss_pred HHHHHHHHHhhhcccceeeeccccccceeeeccCccccccchHHHHHHHhCCcEEEEEecCc----eeeeCCeeeC---- Confidence 3445555665544332 24446666654322 4689999999999999988764322 2455666652 Q ss_pred chhhhhhhHHHHHHHHHHHHHHHHHhcCC----cc-cCChHHHHHHHHHHHHHHHHHHhCCcccCCCccccE------Ee Q lcl|Aclame:pro 467 DPVKNEMSVGEANDFLVSELKIELDNNFI----GT-KVIDTSASLIKNFIQSFLDNKKRAREIQDYTPEEVQ------VV 535 (569) Q Consensus 467 d~~~~~i~v~R~~d~i~~~i~~~~~~~~i----Gk-~nn~~~~~~v~~~i~~~L~~l~~~gaI~~~~~~d~~------v~ 535 (569) .. +|-+++-.|.+...|++.+-+.++ +| |-++....+|++.|+.-|++..+.|.|.+|...-.+ .+ T Consensus 343 -G~--~iD~~~~~~wl~~~iq~~l~~ll~~~~~~KiPy~~~G~~~i~a~i~~~l~~a~~~G~Ia~~~V~~~~~~~~~~~d 419 (450) T protein:vir:95 343 -GE--WIDIIRGVDWLESDLKTSLRDLLINQKGGKITYDDTGITRIRQVIETSLQRAVNRNFLSSYTVNVPKASQVALAD 419 (450) T ss_pred -cc--hhHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccChhhHHHHHHHHHHHHHHHHhcCcccceeEecCChHhcCHHH Confidence 12 566899999999999887765552 45 445667789999999999999999999887432111 11 Q ss_pred cCCCEE-EEEEEEEEccceeEEEEEEEEEee Q lcl|Aclame:pro 536 LEGDVA-SISMTVMPIRSLNKITVQLVYKQQ 565 (569) Q Consensus 536 ~~~d~~-~v~~~v~pv~~~e~I~~ti~v~~~ 565 (569) +.+.+. -+.+.+++.-++..+.++++|+=| T Consensus 420 r~~R~~~~i~~~~~laGAIh~~~i~~~v~~~ 450 (450) T protein:vir:95 420 KKARILKDVTFAGILAGAILDVDLKGTVAYE 450 (450) T ss_pred HhccCCCCeeEEEEEccceEEEEEEEEEEeC Confidence 122222 488899999999999999999988 No 55 >protein:vir:5260 Length: 502 # NCBI annotation: hypothetical protein # Family: family:all:396 # MgeID: mge:117 # MgeName: Aaphi23 # Cross-refs: genbank:acc:NP_852765;genbank:gi:31544040;uniprot:Q7Y5T5;genbank:GeneID:2753559 Probab=99.11 E-value=2e-09 Score=68.28 Aligned_cols=448 Identities=12% Similarity=0.086 Sum_probs=217.3 Q ss_pred CCCccccCcceecCceEEEEEcC-CCccccCCCCceEEEEecc----CCCCCceeEEEcChHHHHHHhcCc-chHHHHHH Q lcl|Aclame:pro 1 MAVEQFPRKKVSRPHTEITVDTS-GIGGSSSSSDKTLMLVGSA----KGGKPDTVYRFRNYQQAKQVLRSG-DLLDAIEL 74 (569) Q Consensus 1 ma~~~~~~~~~~~PGvyi~~~~~-~~~~~~~~~~~~~~~~g~a----~~G~~~~~~~i~~~~~~~~~fg~g-~l~~~~~~ 74 (569) |+.-. +. +|++..+ ...+..+.+.+.+.|+|+. ..+|..++....+-++..+.||.. +.+.+... T Consensus 1 msip~-------s~--ivnV~i~~~~~a~~~~~f~~~l~l~~~~~~~~~~~~~r~~~~~s~~~V~~~FG~~s~ey~aA~~ 71 (502) T protein:vir:52 1 MALSI-------SH--IVNVQLNTVPKSAARKSFGIVALFTPEAGQAFADEKTRYVYVENQRDVEQLFGTNSETAKAAQP 71 (502) T ss_pred CCCCc-------cc--eeEEeeccccccccccccCceEEEeeccCccccCCccceEEecCHHHHHHhcCCChHHHHHHHH Confidence 66532 22 4444433 2345566666788888764 345567788889999999999974 57778888 Q ss_pred HhhhhhhhccCCceEEEEEcC-CCccceeeccceEEEEecCCcccceeEEEEecCC--CCcceEEEEEecCCceeeeccc Q lcl|Aclame:pro 75 AWNASDVNTASAGDILAVRVE-DAKNATLTKGGLTFASTIYGVDANEIQVALEDNN--LTHTKRLTVAFSKDGYKKVFDN 151 (569) Q Consensus 75 ~~~~~~~~~~g~~~~~~~rv~-~~~~a~~~~~~l~~~a~~~G~~gn~i~v~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 151 (569) .|+- ..-++.+|+.|-+ .+..+.++.+.++- ..+.-.+..-+ ..++.+++ .++... +... T Consensus 72 yF~q----~p~P~~l~igR~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~G~l~i~--i~g~~~--t~~~ 134 (502) T protein:vir:52 72 FFAQ----SPRAKQLIVARWQKSASTIEATKNTLSG---------ATLSDDLERFKSVVNGRFSLT--IGGDVK--KVDG 134 (502) T ss_pred HhcC----CCccceEEEEeccccccceeechhhhhh---------hhhHHhHHHhhhhcCceeEEE--ecceee--eeec Confidence 8852 3457889999964 34444444333220 00000000000 01111111 111100 0000 Q ss_pred ccceeE--EEecCcccceeEEEEecCccceeeeeeeccccccccceeeeeccccccccceehhhhhhcccccceeEEecc Q lcl|Aclame:pro 152 LGKIFS--IQYKGSEAQANFTIAQDSISKKATTLTLNVGSEPESTTEVMKYELGQGVYSETNVLVSAINSLPDWEAKFFP 229 (569) Q Consensus 152 ~~~~~~--v~~~G~~a~a~~~v~~~~~s~~~~~lt~~~~~~~~~~~~v~~~~l~~~~~~~~~~~~~~i~~~~~~~~~~~~ 229 (569) +. |+ ..+++.+ ..+....... ... ....|+.... .|.....+ T Consensus 135 i~--lS~~ts~~~vA----------------~~i~~~l~~~-~~~-~tv~~d~~~~----------------~F~i~s~t 178 (502) T protein:vir:52 135 LS--FARLADFNAVA----------------TKIQEKLTTL-SVA-VSIAYDETGN----------------RFIVSANV 178 (502) T ss_pred cc--cccccchhHHH----------------HHHHhhhccc-ccc-eEEEEecCCc----------------eEEEEecc Confidence 00 00 0000000 0000000000 000 0001111000 00000000 Q ss_pred cCCcceecccccchhhccccccceeehhhhhhhhhhhccCceEEEEeccCccccccceeeeecC-CCCCchhHHHHHHHH Q lcl|Aclame:pro 230 IGDKNLPTDALEAVTKVDVKTEAVFVGALAGDIAKQLEYNDYVTVAVDATKPVEDFELTNLTGG-SDGTAPESWANKFPL 308 (569) Q Consensus 230 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~a~~~~~~LtGG-~dg~~~~~~~~~l~~ 308 (569) .+.. ...................+... +... ...-..|. ..|...+++.+++++ T Consensus 179 tg~~--------~~~~~~~a~~~~~~gt~~a~~l~-l~~~----------------~~av~v~~~~~g~~aet~~~al~a 233 (502) T protein:vir:52 179 AGED--------KKTEIDYAIDEGGEGEYIGALLK-LENG----------------QASRKVGKNSVSLKKETLGEALFN 233 (502) T ss_pred CCCc--------ceeEEEEeecCCcchhHHHHHhc-cccc----------------cceeeeeeecccccccCHHHHHHH Confidence 0000 00000000000000000000000 0000 00001110 123344678889999 Q ss_pred HHhcCccE--EEec-CCCHHHHHHHHHHHHHHhcCCCeEEEEEcCCCCC---CHHHHHHHhhhcCCceEEEEeccceecc Q lcl|Aclame:pro 309 LANEGGYY--LVPL-TDKQAVHSEALAFVKDRTDNGDPMRIIVGGGTNE---TVEESITRATNLRDPRASLVGFSGTRKM 382 (569) Q Consensus 309 le~~~~~~--i~~~-~~d~~v~~~l~~~v~~~~~~g~~~~~vv~~~~~~---~~~~~~~~a~~~n~~~v~~v~~~~~~~~ 382 (569) +.+...+| +.+. ..+.+.+.++.+|++.. ++++++...+... ....+....++.++.|.+.++.. . T Consensus 234 ~~~~~~~w~~~~~a~~~~~~~~la~a~~iea~----~~~f~~~~~d~~~~~~~~~~i~~~l~a~~~~~t~~~y~~----~ 305 (502) T protein:vir:52 234 VAEVNNTWYGFTVAAQLTDSEVEAAAKYAQAN----TKLFGANVIRAEQIEWSADNIYKKLYDAGLDHTLAMFDK----N 305 (502) T ss_pred HHhccCceEEEEEeecCChhHHHHHHHHHhhc----CcEEEEEecCcceeccccchHHHHHHhccCceeEEEecC----C Confidence 98775443 3332 22456677899999753 3455554433211 12233344455666676655431 0 Q ss_pred CCcceeeechHHHHHHHHHHhhcCchhcC-----ccceeeccccccccCCHHHHHHHHhcCcEEEEEecCCcceEEEEee Q lcl|Aclame:pro 383 DDGRLLKLPGYMMASQIAGIASGLEVGEA-----ITFKHFNVTSVDRVFESSQLDMLNESGVISIEFVRNRTLTAFRVVQ 457 (569) Q Consensus 383 ~~g~~~~~~~~~~aa~vAG~~A~~~~~~s-----~T~~~~~~~~~~~~~t~~e~~~l~~~Gv~~l~~~~~~~~~~~ri~~ 457 (569) ..+ +.+.+.|..++.++... +.|+.++++.. ..++..|++.|.++|.+++....+ ...+.+ T Consensus 306 -----~~~----~~aa~~g~~as~~f~~~~g~iT~~fk~l~GV~~-~~lt~t~~~al~~~~~N~y~~~~~----~~~~~~ 371 (502) T protein:vir:52 306 -----DMY----PVSSALARLLSTNFAANNSTLTLKFKQQPTITA-DEITATEFAKAKRLGINVYTYFDD----VAMIAE 371 (502) T ss_pred -----cch----hHHHHHHHHHhcCCCcCcceeeecccccCCccc-CcCCHHHHHHHHhcCceEEEEecC----eeEEec Confidence 012 22334577777765432 34455555432 368999999999999999976432 224556 Q ss_pred ceeccCCCCchhhhhhhHHHHHHHHHHHHHHHHHhc-C--Ccc-cCChHHHHHHHHHHHHHHHHHHhCCcccC-CCcc-- Q lcl|Aclame:pro 458 DVTTYNDKSDPVKNEMSVGEANDFLVSELKIELDNN-F--IGT-KVIDTSASLIKNFIQSFLDNKKRAREIQD-YTPE-- 530 (569) Q Consensus 458 ~itT~~~~~d~~~~~i~v~R~~d~i~~~i~~~~~~~-~--iGk-~nn~~~~~~v~~~i~~~L~~l~~~gaI~~-~~~~-- 530 (569) +.++- .+ +|-.++-.|.+...|++.+-+. | -+| |-++....+|++.|+.-|++..+.|.|.. ..-. T Consensus 372 G~~~~-----G~--~iD~~~~~~Wl~~~lq~~l~~~L~~s~~kIPy~~~G~~~l~a~i~~~l~~a~~~G~I~~G~~~~~~ 444 (502) T protein:vir:52 372 GTVIG-----GK--FADEIVILDWFVDAVQKEVFARLYKSPTKIPLTDKGQAILIAAVEKVCLEGINNGAFAPGKWTGAG 444 (502) T ss_pred CeeeC-----Cc--hhhHHHHHHHHHHHHHHHHHHHHHhcCCCcccChhHHHHHHHHHHHHHHHHHhcCccccccccCcc Confidence 66652 13 4557777788888887765332 2 245 45667788999999999999999999952 1100 Q ss_pred --------------ccEEe----c-CCC---E--EEEEEEEEEccceeEEEEEEEEEe Q lcl|Aclame:pro 531 --------------EVQVV----L-EGD---V--ASISMTVMPIRSLNKITVQLVYKQ 564 (569) Q Consensus 531 --------------d~~v~----~-~~d---~--~~v~~~v~pv~~~e~I~~ti~v~~ 564 (569) .+.+. + .+| | --|.+.+++..++++|.+.++|.. T Consensus 445 ~g~~~~~d~~~~gy~v~~~~~~~~s~~dr~~R~~~~~~~~~~~aGaIh~v~i~~nv~~ 502 (502) T protein:vir:52 445 FGNLSTGDYLDKGFYVWAAPMDTLSDSDRQARRATPIQTAVKLAGAIHSSDVIVNYNR 502 (502) T ss_pred cceeeecccccCceEEEeCchhhCCHHHHHcccCCCeEEEEEECceEEEEEEEEEEeC Confidence 01111 1 111 2 258999999999999999999999 No 56 >protein:vir:96104 Length: 504 # NCBI annotation: hypothetical protein ORF029 # Family: family:all:396 # MgeID: mge:1597 # MgeName: F8 # Cross-refs: genbank:acc:YP_001294446;genbank:gi:149408343;genbank:GeneID:5237223 Probab=98.88 E-value=2e-08 Score=62.76 Aligned_cols=443 Identities=10% Similarity=0.054 Sum_probs=205.2 Q ss_pred eecCceEEEEEcCCCccccCC-CCceEEEEeccCCCCCceeEEEcChHHHHHHhcCc-chHHHHHHHhhhhhhhccCCce Q lcl|Aclame:pro 11 VSRPHTEITVDTSGIGGSSSS-SDKTLMLVGSAKGGKPDTVYRFRNYQQAKQVLRSG-DLLDAIELAWNASDVNTASAGD 88 (569) Q Consensus 11 ~~~PGvyi~~~~~~~~~~~~~-~~~~~~~~g~a~~G~~~~~~~i~~~~~~~~~fg~g-~l~~~~~~~~~~~~~~~~g~~~ 88 (569) .+.==-||++..+=....... ...+..|++.-..=|++++....+-++..+.||.. +-+.+....|+=..-...-+++ T Consensus 1 mip~s~iV~V~~~v~~~~~~~~~~~~~l~l~~~~~~~~~r~~~y~s~~~V~~~FG~~S~ey~aA~~yF~~~~~~~~~P~~ 80 (504) T protein:vir:96 1 MISQSRYIRIISGVGAGAPVAGRKLILRVMTTNNVIPPGIVIEFDNANAVLSYFGAQSEEYQRAAAYFKFISKSVNSPSS 80 (504) T ss_pred CCCccceeEeeecccccccccccccceeEeecccCCCccceEEecCHHHHHHhcCCChHHHHHHHHHhhcCCCCCccccE Confidence 333345677766533322222 35666677776666789999999999999999964 5677778888633222335788 Q ss_pred EEEEEc-CCCccceeeccceEEEEecCCcccceeEEEEecCCCCcceEEEEEecCCceeeecccccceeEEEecCcccce Q lcl|Aclame:pro 89 ILAVRV-EDAKNATLTKGGLTFASTIYGVDANEIQVALEDNNLTHTKRLTVAFSKDGYKKVFDNLGKIFSIQYKGSEAQA 167 (569) Q Consensus 89 ~~~~rv-~~~~~a~~~~~~l~~~a~~~G~~gn~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~G~~a~a 167 (569) +|+.|= ..+..+.+..+.++-+ -.+-.+ ...++ T Consensus 81 l~igR~~~~a~~~~l~g~~~~~~------~~~~~~------i~~G~---------------------------------- 114 (504) T protein:vir:96 81 ISFARWVNTAIAPMVVGDNLPKT------IADFAG------FSAGV---------------------------------- 114 (504) T ss_pred EEEEeecCcCccceEEechhHHH------HHHHhh------hhceE---------------------------------- Confidence 999995 3444444433222100 000000 00011 Q ss_pred eEEEEecCccceeeeeeeccccccccceeeeeccccccccceehhhhhhcccccc-----eeEEecccCC-cceeccccc Q lcl|Aclame:pro 168 NFTIAQDSISKKATTLTLNVGSEPESTTEVMKYELGQGVYSETNVLVSAINSLPD-----WEAKFFPIGD-KNLPTDALE 241 (569) Q Consensus 168 ~~~v~~~~~s~~~~~lt~~~~~~~~~~~~v~~~~l~~~~~~~~~~~~~~i~~~~~-----~~~~~~~~~~-~~~~~~~~d 241 (569) +++..++..+....+ +.+...... .....+. ..+...+. -+..+....+ +.+... .+ T Consensus 115 -lsitv~G~~~~~~~i----~~S~~ts~~--------~vA~~i~---~al~~~~~~~~~~~tv~~d~~~~~f~its~-~t 177 (504) T protein:vir:96 115 -LTIMVGAAEKNITAI----DTSAATSMD--------NVASIIQ---TEIRKNTDPQLAQATVTWNPNTNQFTLVGA-TI 177 (504) T ss_pred -EEEEEcceeeeeccc----ccccccchH--------HHHHHHH---hhhhcccccccccceEEEeccCCeEEEEee-cc Confidence 111111111100000 000000000 0000000 00000000 0111111111 001000 00 Q ss_pred chhhccccccceeehhhhhhhhhhhccCceEEEE-eccCccccc-----cceeeeecCCCCCchhHHHHHHHHHHhcCcc Q lcl|Aclame:pro 242 AVTKVDVKTEAVFVGALAGDIAKQLEYNDYVTVA-VDATKPVED-----FELTNLTGGSDGTAPESWANKFPLLANEGGY 315 (569) Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~a~-----~~~~~LtGG~dg~~~~~~~~~l~~le~~~~~ 315 (569) . . ..++... .++. .++. ........|.+. +...++++++.+...+ T Consensus 178 g--------~-----------------~~~~~~~~a~~~-~~~~~lgl~~~~~~~v~g~~a---et~~~al~al~~~~~~ 228 (504) T protein:vir:96 178 G--------T-----------------GVLAVAKSADPQ-DMSTALGWSTSNVVNVAGQAA---DLPDAAVAKSTNVSNN 228 (504) T ss_pred c--------c-----------------ceeEEEeecccc-chhhhhhcccccceEEeeccc---ccHHHHHHHHHhhcCC Confidence 0 0 0000000 0000 0000 011112223333 3456778888776544 Q ss_pred E--EE-ecC-CCHHHHHHHHHHHHHHhcCCCeEEEEEcCCCCCCHHHHHHHhhhcCCceEEEEeccceeccCCcceeeec Q lcl|Aclame:pro 316 Y--LV-PLT-DKQAVHSEALAFVKDRTDNGDPMRIIVGGGTNETVEESITRATNLRDPRASLVGFSGTRKMDDGRLLKLP 391 (569) Q Consensus 316 ~--i~-~~~-~d~~v~~~l~~~v~~~~~~g~~~~~vv~~~~~~~~~~~~~~a~~~n~~~v~~v~~~~~~~~~~g~~~~~~ 391 (569) + +. +.. .+.+.+.++.+|++.. .++++.++... ..+.+.........+...+..++.. ....++ T Consensus 229 Wy~f~~a~~~~~dd~ilalA~w~ea~---~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~ 296 (504) T protein:vir:96 229 FGSFLFAGATLDNDQIKAVSAWNAAQ---NNQFIYTVATS-LANLGALFDLVKGNSGTALNVLSAT--------ASNDFV 296 (504) T ss_pred eEEEEEEeccCCHHHHHHHHHHHhhc---CceEEEEEeec-ccchhhHHHhhhhcceeEEEEeecC--------ccchhH Confidence 3 32 222 3445557888898753 34444444322 2222222222333333333322221 112234 Q ss_pred hHHHHHHHHHHh-hcCchhcCccceeeccccccccCCHHHHHHHHhcCcEEEEEecCCcceEEEE-eeceeccCCCCch- Q lcl|Aclame:pro 392 GYMMASQIAGIA-SGLEVGEAITFKHFNVTSVDRVFESSQLDMLNESGVISIEFVRNRTLTAFRV-VQDVTTYNDKSDP- 468 (569) Q Consensus 392 ~~~~aa~vAG~~-A~~~~~~s~T~~~~~~~~~~~~~t~~e~~~l~~~Gv~~l~~~~~~~~~~~ri-~~~itT~~~~~d~- 468 (569) .++.++++|+.- .+..-..++.|+.++++. ...++..|.+.|.++|.+++....+.. ....+ .++.++ ..+ T Consensus 297 ~~~~~~~~as~~f~~~ng~~T~~fk~l~GVt-a~~lt~t~~~aL~~~~~N~y~~~a~~~-~~~~~~~~G~~~----gG~~ 370 (504) T protein:vir:96 297 EQCPSEILAATNYDEPGASQNYMYYQFPGRN-ITVSDDTAANTVDKSRGNYIGVTQANG-QQLAFYQRGILC----GGPT 370 (504) T ss_pred HHHHHHHHHhcCcCcccccccccccccCCcC-cccCCHHHHHHHHhcCCeEEEEeeccc-ceeeEEecCeee----CCcc Confidence 443334433321 112222344556666554 347899999999999999986543322 23333 345554 122 Q ss_pred hhhhhhHHHHHHHHHHHHHHHHHhcCC--cc-cCChHHHHHHHHHHHHHHHHHHhCCcccC-CCcc-------------- Q lcl|Aclame:pro 469 VKNEMSVGEANDFLVSELKIELDNNFI--GT-KVIDTSASLIKNFIQSFLDNKKRAREIQD-YTPE-------------- 530 (569) Q Consensus 469 ~~~~i~v~R~~d~i~~~i~~~~~~~~i--Gk-~nn~~~~~~v~~~i~~~L~~l~~~gaI~~-~~~~-------------- 530 (569) +|..|.+.+-.|.|...++..+-+.|. +| |-|+....+|++.++.-|++-.+.|.|.. .... T Consensus 371 ~~~wiDv~~~~~WL~~~lq~~l~~l~~~~~kIPyt~~Gi~~l~a~i~~vl~~av~~G~I~~Gv~~~~~q~~~I~~~~~~d 450 (504) T protein:vir:96 371 DAVDMNVYANEIWLKSAIAQALLDLFLNVNAVPASMVGEAMTLAVLQPVLDKATSNGTFTYGKDISAVQQQYITQITGDR 450 (504) T ss_pred ccchhhhhhhHHHHHHHHHHHHHHHHhcCCCcccCHhhHHHHHHHHHHHHHHHHhcceeccCccCCccchheeccccccc Confidence 466777888877777777766544332 34 45677788999999999999999999853 1100 Q ss_pred ----c-------cEEec-----CCCE-----EEEEEEEEEccceeEEEEEEEEE Q lcl|Aclame:pro 531 ----E-------VQVVL-----EGDV-----ASISMTVMPIRSLNKITVQLVYK 563 (569) Q Consensus 531 ----d-------~~v~~-----~~d~-----~~v~~~v~pv~~~e~I~~ti~v~ 563 (569) + +.++. .+|| ..|.+...--.++.+|.+.-+.. T Consensus 451 ~~~~~~~~~GYyv~~~~~s~~s~~~r~~R~~~~~~~~y~~~gaI~~v~~~~~~v 504 (504) T protein:vir:96 451 RAWRQVQTLGYWINITFSSYTNSNTGLTEWKANYTLIYSKGDAIRFVEGSDVMI 504 (504) T ss_pred ccccceeccceEEEecChhccChhHhhhccccceEEEEEECCeEEEEEeccccC Confidence 0 11110 1111 24666666667777766665544 No 57 >protein:vir:99586 Length: 507 # NCBI annotation: hypothetical protein # Family: family:all:396 # MgeID: mge:1544 # MgeName: BcepF1 # Cross-refs: genbank:acc:YP_001039795;genbank:gi:126011045;genbank:GeneID:4818281 Probab=98.75 E-value=6.5e-08 Score=59.97 Aligned_cols=447 Identities=11% Similarity=0.059 Sum_probs=206.4 Q ss_pred eecCceEEEEEcCCCcccc-CCCCceEEEEeccCCCCCceeEEEcChHHHHHHhcCc-chHHHHHHHhhhhhhhccCCce Q lcl|Aclame:pro 11 VSRPHTEITVDTSGIGGSS-SSSDKTLMLVGSAKGGKPDTVYRFRNYQQAKQVLRSG-DLLDAIELAWNASDVNTASAGD 88 (569) Q Consensus 11 ~~~PGvyi~~~~~~~~~~~-~~~~~~~~~~g~a~~G~~~~~~~i~~~~~~~~~fg~g-~l~~~~~~~~~~~~~~~~g~~~ 88 (569) .+.==-+|++..+-..... ..+.++..|++....=|++++....+-++..+.||.. +-+.+....|+-..-...-+++ T Consensus 1 mip~s~iVnV~~~v~~~a~~~~~~~~~lilt~~~~~~~~r~~~y~s~~~V~~~FG~~S~ey~aA~~yFsq~p~~~~~P~~ 80 (507) T protein:vir:99 1 MISQSRYVRIVSGVGAGAPVAQRRLIMRVMTTNAVLPPGVVFESSSADAVGAYFGMASEEYKRAKAYMSFISKSINSPSY 80 (507) T ss_pred CCCccceeEEeeeccccCcccccccceeeeccccCCCccceEeecCHHHHHHhcCCChHHHHHHHHHhccCCCCCcccce Confidence 3444457777766444332 3345677777776666889999999999999999974 5677778888643322335788 Q ss_pred EEEEEcC-CCccceeeccceEEEEecCCcccceeEEEEecCCCCcceEEEEEecCCceeeecccccceeEEEecCcccce Q lcl|Aclame:pro 89 ILAVRVE-DAKNATLTKGGLTFASTIYGVDANEIQVALEDNNLTHTKRLTVAFSKDGYKKVFDNLGKIFSIQYKGSEAQA 167 (569) Q Consensus 89 ~~~~rv~-~~~~a~~~~~~l~~~a~~~G~~gn~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~G~~a~a 167 (569) +|+.|-+ .+..+.+..+.++ + .+..-...- .. T Consensus 81 L~igR~~~~~~~a~l~g~~~~--~------------~l~~~~~~~---------------------------------~G 113 (507) T protein:vir:99 81 ISFARWVNAAIASMIVGDSLV--K------------NLPALKAVA---------------------------------TP 113 (507) T ss_pred EEEEeecCccccceeecchhh--h------------hHHHHhhhc---------------------------------ce Confidence 9999964 4444444332221 0 000000000 00 Q ss_pred eEEEEecCccceeeeeeeccccccccceeeeeccccccccceehhhhhhccc-----ccceeEEecccCCc-ceeccccc Q lcl|Aclame:pro 168 NFTIAQDSISKKATTLTLNVGSEPESTTEVMKYELGQGVYSETNVLVSAINS-----LPDWEAKFFPIGDK-NLPTDALE 241 (569) Q Consensus 168 ~~~v~~~~~s~~~~~lt~~~~~~~~~~~~v~~~~l~~~~~~~~~~~~~~i~~-----~~~~~~~~~~~~~~-~~~~~~~d 241 (569) .+++..++..+....+.+.....-..... .+...+.. ....++.+...++. .+....-. T Consensus 114 ~lti~v~G~~~t~~~i~lS~~ts~~~vAs---------------~i~~~l~a~~~~~~~~~tv~~d~~~~~F~v~s~~tG 178 (507) T protein:vir:99 114 TLSLSIGGTVVPIAGIDLTAALTLTDVAA---------------TLQTKIRASANAELATATVTFNTTTNQFVLNGTTTG 178 (507) T ss_pred eEEEEEcCceeEeccccccccCCHHHHHH---------------HHHHhhhccccccccceEEEEecCCceEEEEeeecc Confidence 12222222111110000000000000000 00000000 01112222211111 11110000 Q ss_pred chhhccccccceeehhhhhhhhhhhccCceEEEEeccCccccccceeeeecCCCCCchhHHHHHHHHHHhcCccE--EEe Q lcl|Aclame:pro 242 AVTKVDVKTEAVFVGALAGDIAKQLEYNDYVTVAVDATKPVEDFELTNLTGGSDGTAPESWANKFPLLANEGGYY--LVP 319 (569) Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~a~~~~~~LtGG~dg~~~~~~~~~l~~le~~~~~~--i~~ 319 (569) .....+ .......+..+..+ ..+.+ .+.....|.+ .++-.++++++.+...+| +.. T Consensus 179 ~~s~i~-----~at~~~~gt~~s~l-------------~~~~~-~~a~~~~g~~---aet~~~a~~a~~~~~~nW~~~~~ 236 (507) T protein:vir:99 179 ALAPTI-----TAVRTDPATDISSL-------------LGWTN-TGTVFVKGQA---AETPDTSISKSAAISTNFGSFIY 236 (507) T ss_pred ccceeE-----EEEcCCchhhHHHH-------------hcccc-ccceEeeccc---ccCHHHHHHHHHhhcCCeEEEEE Confidence 000000 00000000000000 00000 1112222333 344567888887665554 332 Q ss_pred cC---CCHHHHHHHHHHHHHHhcCCCeEEEEEcCCCCCCHHHHHHHhhhcCCceEEEEeccceeccCCcceeeechHHHH Q lcl|Aclame:pro 320 LT---DKQAVHSEALAFVKDRTDNGDPMRIIVGGGTNETVEESITRATNLRDPRASLVGFSGTRKMDDGRLLKLPGYMMA 396 (569) Q Consensus 320 ~~---~d~~v~~~l~~~v~~~~~~g~~~~~vv~~~~~~~~~~~~~~a~~~n~~~v~~v~~~~~~~~~~g~~~~~~~~~~a 396 (569) .. -.++.+.++.+|++.+. ++++-+.. ........... .......+...+.. ...+.+..+ T Consensus 237 a~~~~~td~~~lalA~wiea~~---~~f~~~~~-~~~a~~~~~~~--~~~~~~~~~~~~~~----------~~~~~~~~~ 300 (507) T protein:vir:99 237 TSTPALTNDQITAVASWNASQN---NMYMYSVP-TTIANIGTLYA--AVKGFSGCALNITS----------DSLPVDYIE 300 (507) T ss_pred EeccccChHHHHHHHHHHhhcC---cEEEEEEe-cCchhhhhhhh--hhhhcceeEEEeec----------ccccchhHH Confidence 21 24566678889998642 33333332 22111111111 11111111111110 123334455 Q ss_pred HHHHHHhhcCchhcC-----ccceeeccccccccCCHHHHHHHHhcCcEEEEEecCCcceEEEEe-eceeccCCCCch-h Q lcl|Aclame:pro 397 SQIAGIASGLEVGEA-----ITFKHFNVTSVDRVFESSQLDMLNESGVISIEFVRNRTLTAFRVV-QDVTTYNDKSDP-V 469 (569) Q Consensus 397 a~vAG~~A~~~~~~s-----~T~~~~~~~~~~~~~t~~e~~~l~~~Gv~~l~~~~~~~~~~~ri~-~~itT~~~~~d~-~ 469 (569) +.+.|..++.+.... +.+|.++++.. ..++..|.+.|.++|.+++....+.. ..+++. ++.++ + .+ + T Consensus 301 aa~~g~~as~nf~~~ng~~T~~fk~l~GV~a-~~lt~t~a~al~~~n~N~y~~~a~~~-~~~~~~~~G~~~-g---G~~~ 374 (507) T protein:vir:99 301 QSPCEILAATDYTRVNATQNYMYYQFPSRNI-TVSDDTTANLVDANRGNYIGQTQSAG-QSLAFYQRGILC-G---GPND 374 (507) T ss_pred HHHHHHHHhhccCcCccceeecccccCCccc-ccCCHHHHHHHHhcCCeEEEEecccc-ceeeEEecCeee-C---Cccc Confidence 666777877765432 33444444433 36899999999999999997654432 334443 34444 1 11 3 Q ss_pred hhhhhHHHHHHHHHHHHHHHHHhcC--Ccc-cCChHHHHHHHHHHHHHHHHHHhCCcccC-CCccc-------------- Q lcl|Aclame:pro 470 KNEMSVGEANDFLVSELKIELDNNF--IGT-KVIDTSASLIKNFIQSFLDNKKRAREIQD-YTPEE-------------- 531 (569) Q Consensus 470 ~~~i~v~R~~d~i~~~i~~~~~~~~--iGk-~nn~~~~~~v~~~i~~~L~~l~~~gaI~~-~~~~d-------------- 531 (569) |..+.+.+=.|.|...++..+-+.| .+| |=++....+|++.++.-|++-.++|.|.. .+... T Consensus 375 fid~d~~~~~~WL~~~iq~~l~~l~~~~~kIPyt~~G~~~l~a~i~~~l~~av~nG~I~~Gvtl~~~q~~~in~~~~~~~ 454 (507) T protein:vir:99 375 AVDMNIYANEIWLKSAISAQILSLFLNVPRVPANETGESMLLSVIQSVVNTAKNNGTISAGKNLNVIQQQYITQISGDAN 454 (507) T ss_pred ceeeeeecchHHHHHHHHHHHHHHHhcCCCCccChhhHHHHHHHHHHHHHHHHhccccccCCcccccchheecccccccc Confidence 5455444444444444444333322 244 55677788999999999999999999963 21100 Q ss_pred ----c-------EEe-----cCCC-----EEEEEEEEEEccceeEEEEEEEEE Q lcl|Aclame:pro 532 ----V-------QVV-----LEGD-----VASISMTVMPIRSLNKITVQLVYK 563 (569) Q Consensus 532 ----~-------~v~-----~~~d-----~~~v~~~v~pv~~~e~I~~ti~v~ 563 (569) + .++ ...+ ...|.+-...-.++.+|.+.-+.. T Consensus 455 ~~~~~~~~Gyy~~~~~~s~~~~~~r~~r~~~~~~~~y~~~gaI~~v~~~~~~v 507 (507) T protein:vir:99 455 AWRQVANIGYWLNITFSSYTNPNTQLTEWKASYQLIYSKDDAIRFVEGTDTLI 507 (507) T ss_pred cccceeccceEEEeCChHhcChhhhhccccceEEEEEEeCCeEEEEEeeeecC Confidence 0 111 0112 245666677777888887777766 No 58 >protein:vir:276 Length: 369 # NCBI annotation: putative tail sheath protein # Family: family:all:669 # MgeID: mge:7 # MgeName: K139 # Cross-refs: genbank:acc:NP_536656;genbank:gi:17975134;genbank:GeneID:929090 Probab=98.59 E-value=2.4e-07 Score=56.92 Aligned_cols=326 Identities=15% Similarity=0.121 Sum_probs=166.4 Q ss_pred ccccceeeeeccccccccceehhhhhhcccccceeEEecccC------Ccceec---ccccchhhccccccceeehhhhh Q lcl|Aclame:pro 190 EPESTTEVMKYELGQGVYSETNVLVSAINSLPDWEAKFFPIG------DKNLPT---DALEAVTKVDVKTEAVFVGALAG 260 (569) Q Consensus 190 ~~~~~~~v~~~~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~~------~~~~~~---~~~d~~~~~~~~~~~~~~~~~~~ 260 (569) =.-..+.+....+.++... .+.. ...+++.+ ++.+.. ..+|.+. ...+....+... T Consensus 1 m~~~~V~in~~n~~qg~~~-------~ver----~~lfig~g~~~~~~g~~~~~~~~sdld~~l----g~~ds~lk~~v~ 65 (369) T protein:vir:27 1 MAWPTVIIKILNLMNGPIA-------DIEC----HFLFVIRGTVSGEVRNLIMVDSTSDLDDVL----AEASAEGLAIVK 65 (369) T ss_pred CCCCceEEecccccCCCcc-------cccc----eEEEEEeccccccccceEEecCccchHhhc----CCcChhHHHHHH Confidence 0001122211112222111 1111 11222112 111111 1111111 011111111111 Q ss_pred hhhhhhc-cCceEEEEeccCccccccceeeeecCCCCCchhHHHHHHHHHHhc---CccEEEecCCCHHHHHHHHHHHHH Q lcl|Aclame:pro 261 DIAKQLE-YNDYVTVAVDATKPVEDFELTNLTGGSDGTAPESWANKFPLLANE---GGYYLVPLTDKQAVHSEALAFVKD 336 (569) Q Consensus 261 ~~~~~~~-~~~~v~~~~~~~~~~a~~~~~~LtGG~dg~~~~~~~~~l~~le~~---~~~~i~~~~~d~~v~~~l~~~v~~ 336 (569) +..++ +..|-. .. ..+ ....+|.+|++..... ++..++.++++.+.-.++.+.... T Consensus 66 --aa~~naG~~w~a-~~-----------~p~------~~~~~~~~Av~~a~~~~s~E~V~v~~p~t~~a~i~aaq~~a~e 125 (369) T protein:vir:27 66 --AAQLNGKQAWTA-GV-----------MIL------SEEDNWQDAVKKANEVSSFEFVVLGFDAETKAMIEDAITLRTE 125 (369) T ss_pred --HHHhCCCCceEE-EE-----------EEe------CCchhHHHHHHhhhhhCCccEEEEecCcccHHHHHHHHHHHHH Confidence 11111 111110 00 001 1124688888776432 333344444565544555554444 Q ss_pred Hhc-CCCeEEEEEcCC-------CCCCHHH----HHHHhhhcCCceEEEEeccceeccCCcceeeechHHHHHHHHHHhh Q lcl|Aclame:pro 337 RTD-NGDPMRIIVGGG-------TNETVEE----SITRATNLRDPRASLVGFSGTRKMDDGRLLKLPGYMMASQIAGIAS 404 (569) Q Consensus 337 ~~~-~g~~~~~vv~~~-------~~~~~~~----~~~~a~~~n~~~v~~v~~~~~~~~~~g~~~~~~~~~~aa~vAG~~A 404 (569) +.. -+|.++.++... .+++.++ ..+....|.+.++..|.-.. ..| -.++.+||.++ T Consensus 126 l~~~~~R~vffi~e~~~~~~~~~~~e~w~dy~a~l~al~~g~a~~~V~vv~~~~----~~g--------n~~G~~aGRl~ 193 (369) T protein:vir:27 126 LKNSLGREVGVLCQLPAINNDPTNGQTWSEWLADTVDIPKDVASEYISVVPNVH----AAG--------DTLGKYAGRLA 193 (369) T ss_pred HHHhcCCeEEEEEeccccCCCccccCCHHHHHHHHHHHhhccCcccceeeeeec----ccc--------chHHHHHHHHH Confidence 433 477888877521 2334443 44556778888887763211 011 12466778775 Q ss_pred --cCchhcCccceeec-ccc---c-----cccCCHHHHHHHHhcCcEEEEEecCCcceEEEEeeceeccCCCCchhhhhh Q lcl|Aclame:pro 405 --GLEVGEAITFKHFN-VTS---V-----DRVFESSQLDMLNESGVISIEFVRNRTLTAFRVVQDVTTYNDKSDPVKNEM 473 (569) Q Consensus 405 --~~~~~~s~T~~~~~-~~~---~-----~~~~t~~e~~~l~~~Gv~~l~~~~~~~~~~~ri~~~itT~~~~~d~~~~~i 473 (569) +.+++.||..-... +.+ + ...|+.+.+..|-++|-.++..-.+.+|.-| -++.+. . ....+|++| T Consensus 194 n~aVsIadsp~RVktG~l~g~~~~p~d~~g~~l~~a~l~aLd~agysvp~~Y~gy~G~Yw--~d~~tl-~-~~gsDYq~i 269 (369) T protein:vir:27 194 NKEVSIADSPARVQTGSVLGNTELMKDKAGKALDLATLKALESNRIAVPMWYPDYPGQYW--TTGRTL-D-VPGGDYQDI 269 (369) T ss_pred hcccchhcCcceeeecccccccccccCCCCcccCHHHHHHHHhCCCeEEEeeCCCCceEE--eCceEe-c-cCCCCeehh Confidence 44668888543332 112 1 1247788999999999999987666665433 344443 2 345579999 Q ss_pred hHHHHHHHHHHHHHHHHHhcCCccc--CCh-HHHHHHHHHHHHHHHHHHhC---CcccCCCccccEEec-CCCEEEEEEE Q lcl|Aclame:pro 474 SVGEANDFLVSELKIELDNNFIGTK--VID-TSASLIKNFIQSFLDNKKRA---REIQDYTPEEVQVVL-EGDVASISMT 546 (569) Q Consensus 474 ~v~R~~d~i~~~i~~~~~~~~iGk~--nn~-~~~~~v~~~i~~~L~~l~~~---gaI~~~~~~d~~v~~-~~d~~~v~~~ 546 (569) ..+|++|-+.+.+|..+=. .|+-+ |.. ......+..+..=|++|.+. |-|.-....|+.+.- ...++.+.+. T Consensus 270 E~~RVvdKa~R~vR~~Ai~-~i~Dr~lnstp~sia~~~~~~~~pLr~M~ks~fpgei~~P~d~dI~i~w~~k~~V~I~~~ 348 (369) T protein:vir:27 270 RHIRVAMKAARKVRIRAIA-RIADRTLNSTPQSIAAAKLYFTQDLRTMALTGVPGEIYPPEDEDIQIKWVNSTDVEIYMS 348 (369) T ss_pred hhhhHHHHHHHHHHHHHHH-HhcCcccccChhHHHHHHHHHhhHHHHHHhhcCCeEEecCCCCceEEEeeccceEEEEEE Confidence 9999999999999876533 35543 222 23445677777788888765 333323333455443 4567888999 Q ss_pred EEEccceeEEEEEEEEEeeee Q lcl|Aclame:pro 547 VMPIRSLNKITVQLVYKQQIL 567 (569) Q Consensus 547 v~pv~~~e~I~~ti~v~~~~~ 567 (569) ++|...-.+|.+.|.+.---- T Consensus 349 vrP~~~pk~it~~I~ldl~~~ 369 (369) T protein:vir:27 349 VQPYECPVKITIAISVKQGDY 369 (369) T ss_pred EeeccCCceEEEEEEEeccCC Confidence 999999999999998764332 No 59 >protein:vir:78782 Length: 370 # NCBI annotation: putative tail sheath protein # Family: family:all:669 # MgeID: mge:1857 # MgeName: phiO18P # Cross-refs: genbank:acc:YP_001285652;genbank:gi:148727158;genbank:GeneID:5220132 Probab=98.50 E-value=4.4e-07 Score=55.46 Aligned_cols=324 Identities=11% Similarity=0.038 Sum_probs=160.8 Q ss_pred cceeEEEEecCccceeeeeeeccccccccceeeeeccccccccceehhhhhhcccccceeEEecccCC----ccee---c Q lcl|Aclame:pro 165 AQANFTIAQDSISKKATTLTLNVGSEPESTTEVMKYELGQGVYSETNVLVSAINSLPDWEAKFFPIGD----KNLP---T 237 (569) Q Consensus 165 a~a~~~v~~~~~s~~~~~lt~~~~~~~~~~~~v~~~~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~----~~~~---~ 237 (569) -+..+ .+....+.++...+ + +-...+++.+. +.+. + T Consensus 1 ~~~~v--------------------------~vn~~n~~~g~~~~-------~----er~~lfig~~~~~~g~~~~~~~~ 43 (370) T protein:vir:78 1 MWPYV--------------------------QIYNLNQMQGPVTE-------V----ERHLLFIGSAASNTGKLLSLNAQ 43 (370) T ss_pred CCceE--------------------------EEeeccccCCCcCc-------c----ceeEEEEecccccccceEeecCc Confidence 01111 11111111111000 0 00111111111 1111 1 Q ss_pred ccccchhhccccccceeehhhhhhhhhhh-ccCceEEEEeccCccccccceeeeecCCCCCchhHHHHHHHHHHhc---C Q lcl|Aclame:pro 238 DALEAVTKVDVKTEAVFVGALAGDIAKQL-EYNDYVTVAVDATKPVEDFELTNLTGGSDGTAPESWANKFPLLANE---G 313 (569) Q Consensus 238 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~a~~~~~~LtGG~dg~~~~~~~~~l~~le~~---~ 313 (569) ..+|.+. ...+...++... +..+ .+..|-... ..+ ....+|.+|++..... + T Consensus 44 sdld~~l----~~~ds~lk~~v~--aa~~naG~~~~~~~------------~p~------~~~~d~~~Av~~a~~~~s~E 99 (370) T protein:vir:78 44 SDFDQLL----GAADSELKANLL--AARDNAGQNWSAAA------------YVL------PTDKPWLDAARDAQQTQSFE 99 (370) T ss_pred cCHHHhc----CCcChhHHHHHH--HHHhCCCCceEEEE------------EEe------cCchhHHHHHHHHHhhCCcc Confidence 1111111 111111111111 1111 122221100 001 1123788888766443 3 Q ss_pred ccEEEecCCCHHHHHHHHHHHHHHhc-CCCeEEEEEcCC---CCCCHHH----HHHHhhhcCCceEEEEeccceeccCCc Q lcl|Aclame:pro 314 GYYLVPLTDKQAVHSEALAFVKDRTD-NGDPMRIIVGGG---TNETVEE----SITRATNLRDPRASLVGFSGTRKMDDG 385 (569) Q Consensus 314 ~~~i~~~~~d~~v~~~l~~~v~~~~~-~g~~~~~vv~~~---~~~~~~~----~~~~a~~~n~~~v~~v~~~~~~~~~~g 385 (569) +..++-++++.+.-.++.+....+.+ -+|.++.++... .+.+.++ ..+....+.+.++.+|.-+. | T Consensus 100 ~V~v~~~~s~~a~~~a~~~~a~el~n~~~Rpv~file~~~~~~~e~w~~y~~~l~al~~gia~~~V~vvp~~~------g 173 (370) T protein:vir:78 100 GVVVLGQEWHQAAINAAHALNQELIAKWGRWQFMLLAVPAIADEQDWATYEAELATLQDGIAASSVSLIPQLW------P 173 (370) T ss_pred EEEEecCcchHHHHHHHHHHHHHHHHhcCCeEEEEEeecCCCCcCCHHHHHHHHHHhhhccccccceEEeeec------c Confidence 44444445666666777777666544 467888877543 2344443 44455677788877764321 1 Q ss_pred ceeeechHHHHHHHHHHhh--cCchhcCccceee----c-----cccccccCCHHHHHHHHhcCcEEEEEecCCcceEEE Q lcl|Aclame:pro 386 RLLKLPGYMMASQIAGIAS--GLEVGEAITFKHF----N-----VTSVDRVFESSQLDMLNESGVISIEFVRNRTLTAFR 454 (569) Q Consensus 386 ~~~~~~~~~~aa~vAG~~A--~~~~~~s~T~~~~----~-----~~~~~~~~t~~e~~~l~~~Gv~~l~~~~~~~~~~~r 454 (569) + ..+.+||.++ +..++.+|..-.. + ..+....++.+.++.|-++|-.++..-.+.+|.- T Consensus 174 ~--------~~G~~aGRL~naavsVadsP~Rv~tG~l~gl~~~p~d~~~~~l~~a~l~aLd~agy~vp~~Y~gy~G~Y-- 243 (370) T protein:vir:78 174 T--------LAGAYAGRLCNRAVSIADSPCRVKTGALVGLGNKPVGKDGIPLPLATLQTLEANRYSVPMWYPDYDGIY-- 243 (370) T ss_pred c--------cHHHHHHHHhcCeeeecccceeeeccccccccccccccCCcccCHHHHHHHHhCCCeEEEeeCCCCceE-- Confidence 1 1256677653 3345566643222 1 1122345788999999999999998766666433 Q ss_pred EeeceeccCCCCchhhhhhhHHHHHHHHHHHHHHHHHhcCCccc-CCh-HHHHHHHHHHHHHHHHHHhCCcccCCCc-cc Q lcl|Aclame:pro 455 VVQDVTTYNDKSDPVKNEMSVGEANDFLVSELKIELDNNFIGTK-VID-TSASLIKNFIQSFLDNKKRAREIQDYTP-EE 531 (569) Q Consensus 455 i~~~itT~~~~~d~~~~~i~v~R~~d~i~~~i~~~~~~~~iGk~-nn~-~~~~~v~~~i~~~L~~l~~~gaI~~~~~-~d 531 (569) .-++.|. . ....+|++|..+|++|-+.+.+|..+=.+...+. |+. .....-+..+..=|.+|.+.+.|-+... -+ T Consensus 244 ~~d~~tl-~-~~gsDYq~ie~~RVvdKa~R~vR~~ai~~i~D~~lnst~gsia~~~~~~~~~L~ema~s~~i~~~~fpge 321 (370) T protein:vir:78 244 WADGRTL-D-AEGGDYQVIENLRIAYKVARRMRLRAIARIGDRSFNSTPGSTAAAITYFGKDLREMAKSTTINGQPFPGD 321 (370) T ss_pred EeCceEe-c-cCCCChhhhhhhhHHHHHHHHHHHHHHHHhCCcccCCCCcchhHHHHHHHhhHHHHHhhhhhccccccee Confidence 3344443 2 3455799999999999999999965533333332 222 2223344445555556666666554221 12 Q ss_pred cEEe---------cCCCEEEEEEEEEEccceeEEEEEEEEE----eeee Q lcl|Aclame:pro 532 VQVV---------LEGDVASISMTVMPIRSLNKITVQLVYK----QQIL 567 (569) Q Consensus 532 ~~v~---------~~~d~~~v~~~v~pv~~~e~I~~ti~v~----~~~~ 567 (569) +..+ ....++.+.+.++|.....+|.+.|.+. ++.= T Consensus 322 I~~p~d~Di~i~w~s~~~v~I~~~v~P~~~pk~Itv~I~LDls~e~~~~ 370 (370) T protein:vir:78 322 IASPQDGDIRIQWVAKNLVSVFVVVRTVDCPKGITVNIMLDLSLNNGEG 370 (370) T ss_pred EeccCCCcceEEeeccceEEEEEEEEeccCCceEEEEEEEeeccccCCC Confidence 2222 3456688999999999999999988642 2222 No 60 >protein:vir:3751 Length: 376 # NCBI annotation: orf23 # Family: family:all:669 # MgeID: mge:79 # MgeName: HP1 # Cross-refs: genbank:acc:NP_043492;genbank:gi:9628627;genbank:GeneID:1261129 Probab=98.46 E-value=5.5e-07 Score=54.90 Aligned_cols=323 Identities=13% Similarity=0.060 Sum_probs=170.7 Q ss_pred cccceeeeeccccccccceehhhhhhcccccceeEEecccCC----ccee---cccccchhhccccccceeehhhhhhhh Q lcl|Aclame:pro 191 PESTTEVMKYELGQGVYSETNVLVSAINSLPDWEAKFFPIGD----KNLP---TDALEAVTKVDVKTEAVFVGALAGDIA 263 (569) Q Consensus 191 ~~~~~~v~~~~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~----~~~~---~~~~d~~~~~~~~~~~~~~~~~~~~~~ 263 (569) -=..+++....+.+|...+ |.. ...+.+.+. +.+. ++.+|.+. ...+....+...+ T Consensus 1 ~~~~v~vn~ln~~qg~~~~-------ver----~~lfig~~~~~~~~~~~~~~~sdld~~l----g~~ds~lk~~v~a-- 63 (376) T protein:vir:37 1 MFPSVQINALNQLSGETKE-------IER----HALFVGVGTTNQGKLLALTPDSDFDKVF----GETDTDLKKQVRA-- 63 (376) T ss_pred CCCeEEEeeeeccCCCccc-------ccc----eEEEeeccccccCceEEecCCCChHHhh----CCCchhHHHHHHH-- Confidence 0011222222222221111 111 111122211 1111 11122111 1111111111111 Q ss_pred hhhc-cCceEEEEeccCccccccceeeeecCCCC--CchhHHHHHHHHHHhc-CccEEEecC---CCHHHHHHHHHHHHH Q lcl|Aclame:pro 264 KQLE-YNDYVTVAVDATKPVEDFELTNLTGGSDG--TAPESWANKFPLLANE-GGYYLVPLT---DKQAVHSEALAFVKD 336 (569) Q Consensus 264 ~~~~-~~~~v~~~~~~~~~~a~~~~~~LtGG~dg--~~~~~~~~~l~~le~~-~~~~i~~~~---~d~~v~~~l~~~v~~ 336 (569) ..++ +..|- ..... ....+|.+|++.+... .+-++++.. ++.+.-.++.+.... T Consensus 64 a~~naG~~w~-------------------a~~~~p~~~~~~~~~Av~~a~~~~s~E~V~v~~p~~t~~a~i~a~qa~a~e 124 (376) T protein:vir:37 64 AMLNAGQNWF-------------------AHVYIAQEDGYDFVECVKKANQTASFEYCVNTRYLGVDKASIGKLQECYAE 124 (376) T ss_pred HHhCCCCceE-------------------EEEEecCCChhhHHHHHHHHHhhCCeeEEEEecCcchhHHHHHHHHHHHHH Confidence 1111 22221 00001 1125799998887443 333443332 344444455444444 Q ss_pred Hhc-CCCeEEEEEcCC-------CCCCHHH----HHHHhhhcCCceEEEEeccceeccCCcceeeechHHHHHHHHHHhh Q lcl|Aclame:pro 337 RTD-NGDPMRIIVGGG-------TNETVEE----SITRATNLRDPRASLVGFSGTRKMDDGRLLKLPGYMMASQIAGIAS 404 (569) Q Consensus 337 ~~~-~g~~~~~vv~~~-------~~~~~~~----~~~~a~~~n~~~v~~v~~~~~~~~~~g~~~~~~~~~~aa~vAG~~A 404 (569) ... -+|.++.++... .+++.++ ..+....+.+.++.+|..- + | -..+.+||.++ T Consensus 125 l~~~~~R~vffile~~g~d~~~~~ge~w~~y~~~l~a~~~gia~~~V~vV~~~--~----g--------n~~G~~aGRl~ 190 (376) T protein:vir:37 125 LLAKFGRRTFFIQAVQGINHDQSDGETWDQYVQKLTTLQQTIVADHVCLVPLL--F----G--------NETGVLAGRLA 190 (376) T ss_pred HHHhcCCeEEEEEeccCCCCcccccCCHHHHHHHHHHHhccccccceeeeeee--c----c--------chHHHHHHHHH Confidence 433 478888887643 1234443 3445567888888776431 1 1 12467788875 Q ss_pred --cCchhcCccceeec-cccc----------cccCCHHHHHHHHhcCcEEEEEecCCcceEEEEeeceeccCCCCchhhh Q lcl|Aclame:pro 405 --GLEVGEAITFKHFN-VTSV----------DRVFESSQLDMLNESGVISIEFVRNRTLTAFRVVQDVTTYNDKSDPVKN 471 (569) Q Consensus 405 --~~~~~~s~T~~~~~-~~~~----------~~~~t~~e~~~l~~~Gv~~l~~~~~~~~~~~ri~~~itT~~~~~d~~~~ 471 (569) +.+++.||..-... +.++ ...++.+-++.|-++|-.++..-.+.+|.-| -++.+. . ....+|+ T Consensus 191 naaVsVadspgRV~tGai~gl~~~~~p~d~~g~el~~a~l~aLd~arysvpr~Y~gydG~Yw--~dg~tl-~-~~gsDYq 266 (376) T protein:vir:37 191 NRAVTVADSPARVQTGALVSLGSANKPLDKDGNELTLAHLKSLETARYSVPMWYPDYDGYYR--ADGRTL-D-VEGGDYQ 266 (376) T ss_pred hCCcchhcCccceeecccccccccccccccCCcccchHHHHHHHhCCCeEEEeeCCCCceEE--eCCeEe-c-cCCCCee Confidence 55678888664442 2222 1246778889999999999987666665433 344443 2 3455799 Q ss_pred hhhHHHHHHHHHHHHHHHHHhcCCcc--cCCh-HHHHHHHHHHHHHHHHHHhCCcccCCC-ccccEEec---------CC Q lcl|Aclame:pro 472 EMSVGEANDFLVSELKIELDNNFIGT--KVID-TSASLIKNFIQSFLDNKKRAREIQDYT-PEEVQVVL---------EG 538 (569) Q Consensus 472 ~i~v~R~~d~i~~~i~~~~~~~~iGk--~nn~-~~~~~v~~~i~~~L~~l~~~gaI~~~~-~~d~~v~~---------~~ 538 (569) +|..+|++|-+.+.+|..+=. .|+- .|+. ......+..+..=|++|.+.+-|-+.. |-++..+. .. T Consensus 267 ~ie~~RVvdKa~R~vR~~Ai~-~i~Dr~lnstp~sia~~~~~~~~pLr~M~ks~ei~g~~fpgei~~P~d~dI~i~w~sk 345 (376) T protein:vir:37 267 VIENLRVVDKVARKVRLLAIG-KIADRSFNSTTSSTEYHKNYFAKPLRDMSKSATINGKDFPGECMPPKDDAITIVWQSK 345 (376) T ss_pred eehhchHHHHHHHHHHHHHHH-HhcCccccCChhHHHHHHHHHhHHHHHHHhhhhhccccccceeecCCCCceEEEeccC Confidence 999999999999999875533 3443 2332 335567888888899998888777643 22333333 34 Q ss_pred CEEEEEEEEEEccceeEEEEEEEEEee-eee Q lcl|Aclame:pro 539 DVASISMTVMPIRSLNKITVQLVYKQQ-ILT 568 (569) Q Consensus 539 d~~~v~~~v~pv~~~e~I~~ti~v~~~-~~~ 568 (569) .++.+.+.++|...-.+|.+.|.+.-- ..+ T Consensus 346 ~~V~I~~~vrPy~cpk~i~~~I~LDls~~~~ 376 (376) T protein:vir:37 346 TKVTIYIKVRPYDCPKEITANIFLDLDSLGE 376 (376) T ss_pred ceEEEEEEEeeecCcceeEEEEEEecCCCCC Confidence 568888999999999999999987532 222 No 61 >protein:vir:94073 Length: 494 # NCBI annotation: hypothetical protein # Family: family:all:396 # MgeID: mge:1493 # MgeName: OP2 # Cross-refs: genbank:acc:YP_453619;genbank:gi:84662655;genbank:GeneID:5142583 Probab=98.37 E-value=9.9e-07 Score=53.51 Aligned_cols=436 Identities=11% Similarity=0.034 Sum_probs=198.4 Q ss_pred CCCccccCcceecCceEEEEEcCCCc-cccCCCCceEEEEeccCCCCCceeEEEcChHHHHHHhcCc-chHHHHHHHhhh Q lcl|Aclame:pro 1 MAVEQFPRKKVSRPHTEITVDTSGIG-GSSSSSDKTLMLVGSAKGGKPDTVYRFRNYQQAKQVLRSG-DLLDAIELAWNA 78 (569) Q Consensus 1 ma~~~~~~~~~~~PGvyi~~~~~~~~-~~~~~~~~~~~~~g~a~~G~~~~~~~i~~~~~~~~~fg~g-~l~~~~~~~~~~ 78 (569) |.+=- ==-+|++..+=.. ++...+.+.+ |+.....=|++++..+.+.++..+.||.. +-+.+....|+- T Consensus 1 m~~ip--------~s~iV~V~~~v~~~~~~~~~f~~~-l~~~~~~~~~~r~~~y~s~~~V~~~FG~~S~ey~aA~~yFs~ 71 (494) T protein:vir:94 1 MPNIP--------ISQIVSINPQVVSAGGTQGTLDGL-LLTQATGFPVTQPQVYFSAADVGTAFGLTSDEYNAALVYFAG 71 (494) T ss_pred CCCCC--------cccEEEeeeeccccCCccccccee-EeecCccCCccceeeecCHHHHHHhcCCChHHHHHHHHHhhh Confidence 43211 1125555554322 3333444443 44445566788999999999999999974 567777888852 Q ss_pred hhhhccCCceEEEEEcC-CCccceeeccceEEEEecCCcccceeEEEEecCCCCcceEEEEEecCCceeeecccccceeE Q lcl|Aclame:pro 79 SDVNTASAGDILAVRVE-DAKNATLTKGGLTFASTIYGVDANEIQVALEDNNLTHTKRLTVAFSKDGYKKVFDNLGKIFS 157 (569) Q Consensus 79 ~~~~~~g~~~~~~~rv~-~~~~a~~~~~~l~~~a~~~G~~gn~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (569) ..-...-++++|+.|-+ .+..+.+..+.+ ...++.-+.. + T Consensus 72 ~~~q~p~P~~l~igR~~~~a~~~~l~g~~~--------------~~tl~~~~~~-~------------------------ 112 (494) T protein:vir:94 72 ILGGGQQPASLTIGRYASAATSAAVFGAPL--------------TLSLAQLQTL-S------------------------ 112 (494) T ss_pred ccCCCccccEEEEEeecCccccceeeccch--------------hhhHHhhhhc-c------------------------ Confidence 11113357889999964 333333321111 1111100000 0 Q ss_pred EEecCcccceeEEEEecCccceeeeeeeccccccccceeeeeccccccccceehhhhhhcccccceeEEecccCCc-cee Q lcl|Aclame:pro 158 IQYKGSEAQANFTIAQDSISKKATTLTLNVGSEPESTTEVMKYELGQGVYSETNVLVSAINSLPDWEAKFFPIGDK-NLP 236 (569) Q Consensus 158 v~~~G~~a~a~~~v~~~~~s~~~~~lt~~~~~~~~~~~~v~~~~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~~ 236 (569) ..+++..++ .+....+.+....+-...... ....+. .++.+..+.+.... .+. T Consensus 113 ---------g~l~iti~g-~~~~~~i~lS~~ts~~~vA~~---------------i~~ai~-~a~~~v~~d~~~~~f~v~ 166 (494) T protein:vir:94 113 ---------GTLIVTTDT-QRTSAAINLSGATSFANAASL---------------MTSGFT-TPNFAITYDAQRRRFVLS 166 (494) T ss_pred ---------eEEEEEEcc-eEEEeeecccccCChhhHHHH---------------Hhhhhc-cccceEEEcccCcEEEEE Confidence 111222221 111111111000000000000 000000 01111111111110 000 Q ss_pred cccccchhhccccccceeehhhhhhhhhhhccCceEEEEeccCcccccc------cee-eeecCCCCCchhHHHHHHHHH Q lcl|Aclame:pro 237 TDALEAVTKVDVKTEAVFVGALAGDIAKQLEYNDYVTVAVDATKPVEDF------ELT-NLTGGSDGTAPESWANKFPLL 309 (569) Q Consensus 237 ~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~a~~------~~~-~LtGG~dg~~~~~~~~~l~~l 309 (569) ...... ...+... ++.++.. ... -... |...++..++++++ T Consensus 167 s~ttG~--------------------------~s~is~~---t~~~a~~l~lt~~~~a~v~~~---g~~aet~~~a~~a~ 214 (494) T protein:vir:94 167 TTATGT--------------------------TASVSAV---TGTLADGVGLSTASGAYVEGS---GLAADTAASALDRL 214 (494) T ss_pred EccCCc--------------------------eeEEEEe---ccchhhhhhhhccccceEeec---CcccccHHHHHHHH Confidence 000000 0000000 0011000 000 1112 23345567888888 Q ss_pred HhcCccE--EEec-CCCHHHHHHHHHHHHHHhcCCCeEEEEE-cCCCCC----CHHHHHHHhhhcCCceEEEEeccceec Q lcl|Aclame:pro 310 ANEGGYY--LVPL-TDKQAVHSEALAFVKDRTDNGDPMRIIV-GGGTNE----TVEESITRATNLRDPRASLVGFSGTRK 381 (569) Q Consensus 310 e~~~~~~--i~~~-~~d~~v~~~l~~~v~~~~~~g~~~~~vv-~~~~~~----~~~~~~~~a~~~n~~~v~~v~~~~~~~ 381 (569) .+...+| +... ..+.+.+.++.+|++.+. ++++.+. ...... .-..+.+..+..+++|.+.++.. T Consensus 215 ~~~~~~Wy~f~~~~~~~~~~ilalA~wiea~~---~~~~~~~~~~d~~~~~~~~~~~i~~~l~~~~y~~t~~~y~~---- 287 (494) T protein:vir:94 215 AASSSTWAIFTTAWAASLSDRTALAQWTSDQV---FRRIYAAWDQDAAGLSVNNVSSFGNIVKTTPFSNTIPVYGL---- 287 (494) T ss_pred HhccCceEEEEEecCCCHHHHHHHHHHHhhcC---ccEEEEEecCCcceeecccchhHHHHHHhhcCCceEEEcCC---- Confidence 7765443 3333 335677788999998642 2233322 222111 11233344555667777665532 Q ss_pred cCCcceeeechHHHHHHHHHHhhcCchhcCccceeec----cccccc-cCCHHHHHHHHhcCcEEEEEecCCcceEEEEe Q lcl|Aclame:pro 382 MDDGRLLKLPGYMMASQIAGIASGLEVGEAITFKHFN----VTSVDR-VFESSQLDMLNESGVISIEFVRNRTLTAFRVV 456 (569) Q Consensus 382 ~~~g~~~~~~~~~~aa~vAG~~A~~~~~~s~T~~~~~----~~~~~~-~~t~~e~~~l~~~Gv~~l~~~~~~~~~~~ri~ 456 (569) .-|. +.+.|..+..+++....+..+. ..++.. .++.+|.+.|..+|.+++....+. +...+++ T Consensus 288 -------~~~~----aa~~g~~aa~~~~~~~g~~T~~~k~q~~gi~~~~l~~t~a~al~~~~~N~y~~~~~~-~~~~~~~ 355 (494) T protein:vir:94 288 -------LANA----MIVLAWGASTNLQIAEGRTTLALRSPVSSAGVRVDNLANANALLSNGYTYLGKYASA-TNTYTVT 355 (494) T ss_pred -------CChH----HHHHHHHHhccccccCcceeEEeeccCCCCCCccCCHHHHHHHHhcCCeEEEEeccc-CceEEEe Confidence 0121 3445667777765433222221 234444 468899999999999999775443 3455666 Q ss_pred eceeccCCCCchhhhhhhHHHHHHHHHHHHHHHHHhcCCcc-cCChHHHHHHHHHHHHHHHHHHhCCcccC-CCcccc-- Q lcl|Aclame:pro 457 QDVTTYNDKSDPVKNEMSVGEANDFLVSELKIELDNNFIGT-KVIDTSASLIKNFIQSFLDNKKRAREIQD-YTPEEV-- 532 (569) Q Consensus 457 ~~itT~~~~~d~~~~~i~v~R~~d~i~~~i~~~~~~~~iGk-~nn~~~~~~v~~~i~~~L~~l~~~gaI~~-~~~~d~-- 532 (569) ++-+.-+.-.+.+ ......-+...|..++...|.+ .+| |=++....+|++.++.-|++-.++|.|.. ..-.+. T Consensus 356 ~gg~~sG~~~~id-~~~~~~WL~~~iq~~l~~ll~~--~~KIPytd~G~~~l~a~i~~~l~~av~nG~I~~Gv~~~~~q~ 432 (494) T protein:vir:94 356 YNGAIGGQFLWAD-TALGWIALRRNLQQALFETLLA--YRSLPYNADGYNALYQGAQDVVSQFVAAGVIRAGVALSASQR 432 (494) T ss_pred cCceeccccceee-eeccHHHHHHHHHHHHHHHHHh--CCCcccChhhHHHHHHHHHHHHHHHHhCceeecccccCcchh Confidence 6554311110000 0111122334455555555432 256 55677788999999999999999999963 110000 Q ss_pred ---------------E--------Ee-c----CCCEE--EEEEEEEEccceeEEEEEEEEEe Q lcl|Aclame:pro 533 ---------------Q--------VV-L----EGDVA--SISMTVMPIRSLNKITVQLVYKQ 564 (569) Q Consensus 533 ---------------~--------v~-~----~~d~~--~v~~~v~pv~~~e~I~~ti~v~~ 564 (569) + .+ + ..+|. -+.+...--.++.+|.+..+... T Consensus 433 ~~i~~~~G~~~~~~~~~kGyy~~~~~~~s~~~ra~R~~~~~~~~y~~~GAIh~v~i~~~~v~ 494 (494) T protein:vir:94 433 AQIDQAAGVPISGDVVDKGWYLQVIDPITTTVRTDRGSPTVNFWYCDGGSIQRVVVSATTVI 494 (494) T ss_pred hhhhhhhcCccccceeccceeeeccCCCChhhhhccccCCceEEEEecCcEEEEEEeeEEeC Confidence 0 00 0 01221 23334444667777777777666 No 62 >protein:vir:3788 Length: 376 # NCBI annotation: tail sheath # Family: family:all:669 # MgeID: mge:328 # MgeName: HP2 # Cross-refs: genbank:acc:NP_536828;genbank:gi:17981837;genbank:GeneID:929216 Probab=98.34 E-value=1.2e-06 Score=53.10 Aligned_cols=323 Identities=13% Similarity=0.071 Sum_probs=166.8 Q ss_pred cccceeEEEecCcccceeEEEEecCccceeeeeeeccccccccceeeeeccccccccceehhhhhhcccccceeEEeccc Q lcl|Aclame:pro 151 NLGKIFSIQYKGSEAQANFTIAQDSISKKATTLTLNVGSEPESTTEVMKYELGQGVYSETNVLVSAINSLPDWEAKFFPI 230 (569) Q Consensus 151 ~~~~~~~v~~~G~~a~a~~~v~~~~~s~~~~~lt~~~~~~~~~~~~v~~~~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 230 (569) +. ..+.+....+.+|...+ + +-...+++. T Consensus 1 ~~----------------------------------------~~v~vn~~n~~~g~~~~-------~----er~~Lfig~ 29 (376) T protein:vir:37 1 MF----------------------------------------PSVQINALNQLSGETKE-------I----ERHALFVGV 29 (376) T ss_pred CC----------------------------------------CeEEEecccccCCCccc-------c----cceEEeecc Confidence 00 01111111111111110 0 011111212 Q ss_pred CC----ccee---cccccchhhccccccceeehhhhhhhhhhhc-cCceEEEEeccCccccccceeeeecCCCCC--chh Q lcl|Aclame:pro 231 GD----KNLP---TDALEAVTKVDVKTEAVFVGALAGDIAKQLE-YNDYVTVAVDATKPVEDFELTNLTGGSDGT--APE 300 (569) Q Consensus 231 ~~----~~~~---~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~a~~~~~~LtGG~dg~--~~~ 300 (569) +. +.+. ...+|.+. ...+...++... +..++ +..|- .+.-.. ... T Consensus 30 ~~~~~~~~~~~~~~sdld~~l----g~~~~~lk~~v~--aa~~naG~~~~-------------------~~~~~~~~~~~ 84 (376) T protein:vir:37 30 GTTNQGKLLALTPDSDFDKVF----GETDTDLKKQVR--AAMLNAGQNWF-------------------AHVYIAQEDGY 84 (376) T ss_pred ccccccceeeecCccchHhhh----CCCchHHHHHHH--HHHhCCCCcEE-------------------EEEEeecCCch Confidence 11 1111 01111111 001111111110 11111 12111 111111 124 Q ss_pred HHHHHHHHH-HhcCccEEEe--c-CCCHHHHHHHHHHHHHHhc-CCCeEEEEEcCCC-------CCCHH----HHHHHhh Q lcl|Aclame:pro 301 SWANKFPLL-ANEGGYYLVP--L-TDKQAVHSEALAFVKDRTD-NGDPMRIIVGGGT-------NETVE----ESITRAT 364 (569) Q Consensus 301 ~~~~~l~~l-e~~~~~~i~~--~-~~d~~v~~~l~~~v~~~~~-~g~~~~~vv~~~~-------~~~~~----~~~~~a~ 364 (569) +|.++++.. +...|..+++ + .++.+.-.++.+....+.. -+|.++.++.... .++.+ ...+... T Consensus 85 ~~~~Av~~a~~~~s~E~V~v~~pv~t~~a~i~aa~~~a~el~~~~~Rpv~file~r~~~~~~~~~e~w~~y~~~~~al~~ 164 (376) T protein:vir:37 85 DFVECVKKANQTASFEYCVNTRYLGVDKASIGKLQECYAELLAKFGRRTFFIQAVQGINHDQSDGETWDQYVQKLTTLQQ 164 (376) T ss_pred HHHHHHHHhhhhcCceEEEEeccccccHHHHHHHHHHHHHHHHhcCCeEEEEEeccCcCcccccccCHHHHHHHHHHhhc Confidence 788888774 3334444432 2 2355555556666666544 3788888886541 23444 3344556 Q ss_pred hcCCceEEEEeccceeccCCcceeeechHHHHHHHHHHhh--cCchhcCccceeec-cccc----------cccCCHHHH Q lcl|Aclame:pro 365 NLRDPRASLVGFSGTRKMDDGRLLKLPGYMMASQIAGIAS--GLEVGEAITFKHFN-VTSV----------DRVFESSQL 431 (569) Q Consensus 365 ~~n~~~v~~v~~~~~~~~~~g~~~~~~~~~~aa~vAG~~A--~~~~~~s~T~~~~~-~~~~----------~~~~t~~e~ 431 (569) .+.+.++.+|.-. + | ..++.+||.+| +.++++||..-... +.++ ...++...+ T Consensus 165 gia~~~V~~V~~~--~----g--------n~~G~~aGRl~~aaVsVadspgRV~tG~l~gl~~~~lp~d~~~~~l~~a~l 230 (376) T protein:vir:37 165 TIVADHVCLVPLL--F----G--------NETGVLAGRLANRAVTVADSPARVQTGALVSLGSANKPLDKDRNELTLAHL 230 (376) T ss_pred ccccccceeeeee--h----h--------hhHHHHHHHHhhcccchhhCccceeccccccccccccccCcCcccCCHHHH Confidence 6777777665421 0 1 23578889874 55678888654332 2221 135788999 Q ss_pred HHHHhcCcEEEEEecCCcceEEEEeeceeccCCCCchhhhhhhHHHHHHHHHHHHHHHHHhcCCcc-c-CCh-HHHHHHH Q lcl|Aclame:pro 432 DMLNESGVISIEFVRNRTLTAFRVVQDVTTYNDKSDPVKNEMSVGEANDFLVSELKIELDNNFIGT-K-VID-TSASLIK 508 (569) Q Consensus 432 ~~l~~~Gv~~l~~~~~~~~~~~ri~~~itT~~~~~d~~~~~i~v~R~~d~i~~~i~~~~~~~~iGk-~-nn~-~~~~~v~ 508 (569) +.|-++|-.++..-.+.+|.- .-++.+. . ....+|++|..+|++|-+.+.+|...=. +|.- . |.. ..-...+ T Consensus 231 ~aLd~agy~vp~~Y~gy~G~Y--~~d~~tl-~-~~gsDY~~ie~~RVvdKa~R~vR~~ai~-~i~D~~lnst~~sia~~~ 305 (376) T protein:vir:37 231 KSLETARYSVPMWYPDYDGYY--WADGRTL-D-VEGGDYQVIENLRVVDKVARKVRLLAIG-KIADRSFNSTTSSTEYHK 305 (376) T ss_pred HHHHhCCCeEEEeeCCCCceE--EeCceEe-c-cCCCChhhhhhhhHHHHHHHHHHHHHHH-HhCCcccCcchhhHHHHH Confidence 999999999998766666443 3344443 2 3455799999999999999999876533 3432 2 222 2234567 Q ss_pred HHHHHHHHHHHhCCcccCCC-ccccEEec---------CCCEEEEEEEEEEccceeEEEEEEEEEe-eeee Q lcl|Aclame:pro 509 NFIQSFLDNKKRAREIQDYT-PEEVQVVL---------EGDVASISMTVMPIRSLNKITVQLVYKQ-QILT 568 (569) Q Consensus 509 ~~i~~~L~~l~~~gaI~~~~-~~d~~v~~---------~~d~~~v~~~v~pv~~~e~I~~ti~v~~-~~~~ 568 (569) ..+..=|++|.+...|.+.. |-++..+. ...++.+.+.++|.....+|.+.|.+.- |-.+ T Consensus 306 ~yi~~pLr~M~~s~~i~g~~fpGeI~~p~d~Di~i~w~s~~~V~I~~~v~P~~~pk~Itv~I~Ldlsn~~~ 376 (376) T protein:vir:37 306 NYFAKPLRDMSKSATINGKDFPGECMPPKDDAITIVWQSKTKVTIYIKVRPYDCPKEITANIFLDLDSLGE 376 (376) T ss_pred HHHHHHHHHHHhcchhccccccceeecCCCCCceEEeeccceEEEEEEEEeccCCceEEEEEEeecCCCCC Confidence 77777788888887776643 22333333 4456888999999999999998877542 1222 No 63 >protein:vir:80052 Length: 331 # NCBI annotation: gp14 # Family: family:all:396 # MgeID: mge:1876 # MgeName: B054 # Cross-refs: genbank:acc:YP_001468718;genbank:gi:157325298;genbank:GeneID:5601743 Probab=98.31 E-value=7.4e-07 Score=54.18 Aligned_cols=309 Identities=9% Similarity=0.044 Sum_probs=141.9 Q ss_pred eeeccccccccceehhhhhhccc-ccceeEEec-ccCCcceecccccchhhccccccceeehhhhhhhhhhhccCceEEE Q lcl|Aclame:pro 197 VMKYELGQGVYSETNVLVSAINS-LPDWEAKFF-PIGDKNLPTDALEAVTKVDVKTEAVFVGALAGDIAKQLEYNDYVTV 274 (569) Q Consensus 197 v~~~~l~~~~~~~~~~~~~~i~~-~~~~~~~~~-~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 274 (569) |.+.-.+-. -.+. .....+. --++..... +...+......++.+ ..+.........+ .. ..+.. T Consensus 1 ~~~~iv~V~--v~~~-~~~~~~~~~~~~~~~~~~~t~~~~~~y~s~~~v-~~d~~~~~~~Yka-a~---~~f~Q------ 66 (331) T protein:vir:80 1 MVETITDVR--VHIS-VLYPSPRIGLGRPAIFVKGTAMGYKEYTTLEEL-KDTFADNTEVYAK-AK---AVFLQ------ 66 (331) T ss_pred Cccceecce--eeec-ccccccccccCcceeEEeccccceEEEechhhh-ccCCCCCcHHHHH-HH---HHHhc------ Confidence 110000000 0000 0000000 000000000 000000000011111 0111110000000 00 00000 Q ss_pred EeccCccccccceeeeecCCCCCchhHHHHHHHHHHhcCccEEEecCCCHHHHHHHHHHHHHHhcCCCeEEEEEcCCCCC Q lcl|Aclame:pro 275 AVDATKPVEDFELTNLTGGSDGTAPESWANKFPLLANEGGYYLVPLTDKQAVHSEALAFVKDRTDNGDPMRIIVGGGTNE 354 (569) Q Consensus 275 ~~~~~~~~a~~~~~~LtGG~dg~~~~~~~~~l~~le~~~~~~i~~~~~d~~v~~~l~~~v~~~~~~g~~~~~vv~~~~~~ 354 (569) +.. ...+.++.. ++.+-.+++.+.-...++.+++...+.+.+.++.+|++.. ++++.++... T Consensus 67 ---~~~------~~~i~v~~~--~~~~~~~a~~a~~~~~w~~~~~~~~~~~~~~a~a~~~~a~----~~~f~~~~~~--- 128 (331) T protein:vir:80 67 ---KDR------PDTVAVITY--EDTKLLEAAEAYFLKSWHFALLAEFKAADALALSNLIEEQ----KFKFAVFQVT--- 128 (331) T ss_pred ---cCc------cceEEEecc--chHHHHHHHHHhccCceeEEEeecCCHHHHHHHHHHHhhC----CcEEEEEecC--- Confidence 000 001111111 1112223333333344555555555666677888999753 2355555322 Q ss_pred CHHHHHHHhhhcCCceEEEEeccceeccCCcceeeechHHHHHHHHHHhhcCchhc-Ccccee-eccccccccCCHHHHH Q lcl|Aclame:pro 355 TVEESITRATNLRDPRASLVGFSGTRKMDDGRLLKLPGYMMASQIAGIASGLEVGE-AITFKH-FNVTSVDRVFESSQLD 432 (569) Q Consensus 355 ~~~~~~~~a~~~n~~~v~~v~~~~~~~~~~g~~~~~~~~~~aa~vAG~~A~~~~~~-s~T~~~-~~~~~~~~~~t~~e~~ 432 (569) +...+....+ ++..+.+++.. . .++.. +.+.|..+..++.. ...++. ++++.. ..++..|++ T Consensus 129 ~~~~~~~~~~--~~~t~~~~~~~-----~-------~~~~~-aa~~g~~~~~~~g~~t~~fk~~l~GV~~-~~lt~t~~~ 192 (331) T protein:vir:80 129 AVADITPLAK--NTRTIAIVHSK-----T-------GEKLD-AALIGNVASLPVGSATWKGRHGLAGITS-EELKVSEID 192 (331) T ss_pred chHHHHHhhc--cccEEEEEcCC-----c-------cchhH-HHHHHHHHhcCccceeeeeecccCCCCC-CCCCHHHHH Confidence 2222222221 22233333321 1 12223 34446666666643 233443 454433 368999999 Q ss_pred HHHhcCcEEEEEecCCcceEEEEeeceeccCCCCchhhhhhhHHHHHHHHHHHHHHHHHhcCC--cc-cCChHHHHHHHH Q lcl|Aclame:pro 433 MLNESGVISIEFVRNRTLTAFRVVQDVTTYNDKSDPVKNEMSVGEANDFLVSELKIELDNNFI--GT-KVIDTSASLIKN 509 (569) Q Consensus 433 ~l~~~Gv~~l~~~~~~~~~~~ri~~~itT~~~~~d~~~~~i~v~R~~d~i~~~i~~~~~~~~i--Gk-~nn~~~~~~v~~ 509 (569) .|..+|.+++....+ .-.+.++.++- .. +|-.++-.|.+...+++.+-+.++ +| |=++.....|++ T Consensus 193 al~~~~~N~y~~~~~----~~~~~~G~~~~-----G~--~iD~~~~~dWl~~~lq~~l~~ll~~~~kiPy~~~G~~~l~a 261 (331) T protein:vir:80 193 AIQKAGGMCYIEKAG----IAQTSEGKTVS-----GE--FIDSIHGDDWIKATIETRLQKLLTETDKLTFDARGIALLQS 261 (331) T ss_pred HHHhcCceEEEEecC----eeEEecceEeC-----ch--hHHHHHHHHHHHHHHHHHHHHHHHhCCCCccChhhHHHHHH Confidence 999999999976432 23455666542 22 577888888888888876655553 33 345566789999 Q ss_pred HHHHHHHHHHhCCcccCC-C---cc-ccEEe-----cCCCE-----EEEEEEEEEccceeEEEEEEEEEe Q lcl|Aclame:pro 510 FIQSFLDNKKRAREIQDY-T---PE-EVQVV-----LEGDV-----ASISMTVMPIRSLNKITVQLVYKQ 564 (569) Q Consensus 510 ~i~~~L~~l~~~gaI~~~-~---~~-d~~v~-----~~~d~-----~~v~~~v~pv~~~e~I~~ti~v~~ 564 (569) .++.-|++..+.|.|..- . +. .+..+ ..+|+ --|.+.+.+..++.+|.++++|.- T Consensus 262 ~i~~~~~~av~~G~I~~g~~~~~~~~~v~~~~~~~~s~~dr~~R~~~~~~~~~~~~gaI~~v~i~~~v~~ 331 (331) T protein:vir:80 262 ELTTVLNEGFANGIIDSNDETGEPNFSITALQRSDLNDDDIAKRNYKGLSFRYKRSGAIHSVDVYGEVEV 331 (331) T ss_pred HHHHHHHHHHhCCceecCccCCCcceEEEeCchhcCCHHHHhccCCCCeEEEEEEcceEEEEEEEEEEeC Confidence 999999999999999621 1 10 01111 11222 248888999999999999999888 No 64 >protein:vir:107720 Length: 515 # NCBI annotation: gp17 # Family: family:all:396 # MgeID: mge:1520 # MgeName: BcepB1A # Cross-refs: genbank:acc:YP_024865;genbank:gi:48697507;genbank:GeneID:2948336 Probab=98.30 E-value=1.5e-06 Score=52.52 Aligned_cols=456 Identities=9% Similarity=-0.004 Sum_probs=201.3 Q ss_pred CCCccccCcceecCceEEEEEcCCCccccCCCCc--eEEEEeccCCCCCceeEEEcChHHHHHHhcCc-chHHHHHHHhh Q lcl|Aclame:pro 1 MAVEQFPRKKVSRPHTEITVDTSGIGGSSSSSDK--TLMLVGSAKGGKPDTVYRFRNYQQAKQVLRSG-DLLDAIELAWN 77 (569) Q Consensus 1 ma~~~~~~~~~~~PGvyi~~~~~~~~~~~~~~~~--~~~~~g~a~~G~~~~~~~i~~~~~~~~~fg~g-~l~~~~~~~~~ 77 (569) |+ +..=+||...+.-..+. +...+ ...+++....=|++++....+.++..+.||.. +-+.+....|+ T Consensus 1 m~---------I~~~~~V~i~~~v~aa~-~~~~~~f~~li~t~~~~~p~~r~~~y~s~~~V~~~FG~~S~ey~aA~~yFs 70 (515) T protein:vir:10 1 MP---------ISFDKYVAITSGVAAQQ-QIAARSFAIRVYTPNPMVSVDRLITATSAADVGAYFGTASEEYKRAVKNFG 70 (515) T ss_pred CC---------CCceeEEEeecccccCC-ccccccceeeeeecccCCCccceeeecCHHHHHHhcCCChHHHHHHHHHhh Confidence 43 44557777776643322 22222 23345666666889999999999999999974 56777777775 Q ss_pred hhhhhccCCceEEEEEcC-CCccceeeccceEEEEecCCcccceeEEEEecCCCCcceEEEEEecCCceeeeccccccee Q lcl|Aclame:pro 78 ASDVNTASAGDILAVRVE-DAKNATLTKGGLTFASTIYGVDANEIQVALEDNNLTHTKRLTVAFSKDGYKKVFDNLGKIF 156 (569) Q Consensus 78 ~~~~~~~g~~~~~~~rv~-~~~~a~~~~~~l~~~a~~~G~~gn~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (569) -..-...-++++|+.|-+ .+..+.+..+.+.- ..+..-+....+.+++..++....++.. T Consensus 71 g~~~q~p~P~~L~igR~~~~a~~~~l~g~~~~~-------------~~l~~~~~is~G~ltitidG~~~~t~s~------ 131 (515) T protein:vir:10 71 FISKKTRRPTSIQFARWQREAGPVAIYGGAKKA-------------AALATLQAVTAGAISFLFGGATTVTVSG------ 131 (515) T ss_pred hccCCcccccEEEEEeccCcccceEEEeccchh-------------hhHHhhhcccceeEEEEEcceEEEEeec------ Confidence 222223458889999954 44555554443320 0011100000111211111111111000 Q ss_pred EEEecCcccceeEEEEecCccceeeeeeeccc--cccccceeeeeccccccccceehhhhhhcccccceeEEecccCCcc Q lcl|Aclame:pro 157 SIQYKGSEAQANFTIAQDSISKKATTLTLNVG--SEPESTTEVMKYELGQGVYSETNVLVSAINSLPDWEAKFFPIGDKN 234 (569) Q Consensus 157 ~v~~~G~~a~a~~~v~~~~~s~~~~~lt~~~~--~~~~~~~~v~~~~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 234 (569) +.+++.- .-...+..+..+.. .+.........|+...+...-.. ....-++.. ...+. T Consensus 132 -i~~S~at----------s~~~vAs~i~tal~~~~~~~~~~~tv~~d~~~~~F~v~s-~~tG~~~~i--s~~~~------ 191 (515) T protein:vir:10 132 -ISFSAAT----------SLADVASELQTALRANADANLATCTVSYDPVGARFNFAG-SPSDDTVQE--SISIV------ 191 (515) T ss_pred -ccccccc----------CHHHHHHHHHhhhccccccccceeEEEEecCCCeEEEEE-eecCCceeE--EEEEe------ Confidence 0000000 00000000000000 00000001112221111110000 000000000 00000 Q ss_pred eecccccchhhccccccceeehhhhhhhhhhhccCceEEEEeccCccccccceeeeecCCCCCchhHHHHHHHHHHhcCc Q lcl|Aclame:pro 235 LPTDALEAVTKVDVKTEAVFVGALAGDIAKQLEYNDYVTVAVDATKPVEDFELTNLTGGSDGTAPESWANKFPLLANEGG 314 (569) Q Consensus 235 ~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~a~~~~~~LtGG~dg~~~~~~~~~l~~le~~~~ 314 (569) +.... .....++.. ++...+....+|.+ .++-.++++++.+... T Consensus 192 ---------------t~~~~-~t~~a~~lg-----------------lt~~~~av~~~g~a---aet~~~a~~a~~~~s~ 235 (515) T protein:vir:10 192 ---------------PQSNP-AIDVAQLLG-----------------WNSAQGASYIAASP---VVSPVDTLIASVAGNN 235 (515) T ss_pred ---------------cCCCc-hhhHHHHhc-----------------cccccceEEecccc---cccHHHHHHHHHhccC Confidence 00000 000000000 00011112334433 3345678888877655 Q ss_pred cEE--EecC-----CCHHHHHHHHHHHHHHhcCCCeEEEEEcCCC-CCCHHHHHHHhhhcCCceEEEEeccceeccCCcc Q lcl|Aclame:pro 315 YYL--VPLT-----DKQAVHSEALAFVKDRTDNGDPMRIIVGGGT-NETVEESITRATNLRDPRASLVGFSGTRKMDDGR 386 (569) Q Consensus 315 ~~i--~~~~-----~d~~v~~~l~~~v~~~~~~g~~~~~vv~~~~-~~~~~~~~~~a~~~n~~~v~~v~~~~~~~~~~g~ 386 (569) +|. .... ...+....+.+|+++.. +.++--..... ...-..+.-.... .+.+...+.+.. T Consensus 236 nWy~f~~a~~~~~~~~~a~~~a~a~~~e~~~---~~~~~~~~~~~~~~~~~~a~~~~~~-~~~~~~~~~~~~-------- 303 (515) T protein:vir:10 236 NFGSILFTKNGGTGITLSDAEAIALQNQSYN---VAYKFQVGVDDTTYSSWQAALAAIG-GVNMIYSPVALA-------- 303 (515) T ss_pred CeEEEEEeecCccccchhHHHHHHHHHhhcC---ceEEEEeccCccceechhhhhhhhh-hcCceEEEEecc-------- Confidence 543 3221 12455566777776532 23332222111 1100111000111 112222222210 Q ss_pred eeeechHHHHHHHHHHhhcCchhcC-----ccceeeccccccccCCHHHHHHHHhcCcEEEEEecCCcceEEEEee-cee Q lcl|Aclame:pro 387 LLKLPGYMMASQIAGIASGLEVGEA-----ITFKHFNVTSVDRVFESSQLDMLNESGVISIEFVRNRTLTAFRVVQ-DVT 460 (569) Q Consensus 387 ~~~~~~~~~aa~vAG~~A~~~~~~s-----~T~~~~~~~~~~~~~t~~e~~~l~~~Gv~~l~~~~~~~~~~~ri~~-~it 460 (569) ..++ ++...|..|+.+.... +-+|.++++.. ..++..|.+.|.++|.+++....+.+ ..+++++ +.. T Consensus 304 -~~~~----~a~~~g~~asvnf~~~ng~iT~kfKq~~Gita-~~lt~t~a~al~~~~~N~Y~~~~~~~-~~~~~~~~G~~ 376 (515) T protein:vir:10 304 -AEYH----DMQDGIIEAATDFTQQGGATGYMYVQFNNQTP-AVNDDTLSGILDDLNINYYGQTQVNG-TNLSFYQDGVM 376 (515) T ss_pred -Ccch----HHHHHHHHHhcCCCccchhheeccccCCCCcc-ccCCHHHHHHHHhcCCeEEEEEeccC-ceEEEEeCCee Confidence 0122 2344566677765433 33344443322 36899999999999999997655433 3345543 444 Q ss_pred ccCCCCchhhhhhhHHHHHHHHHHHHHHHHHhcCC--cc-cCChHHHHHHHHHHH-HHHHHHHhCCcccC-CCccc---- Q lcl|Aclame:pro 461 TYNDKSDPVKNEMSVGEANDFLVSELKIELDNNFI--GT-KVIDTSASLIKNFIQ-SFLDNKKRAREIQD-YTPEE---- 531 (569) Q Consensus 461 T~~~~~d~~~~~i~v~R~~d~i~~~i~~~~~~~~i--Gk-~nn~~~~~~v~~~i~-~~L~~l~~~gaI~~-~~~~d---- 531 (569) + ...-+|+-|-+++-.|.+...++..+-+.|. +| |=++....+|++.+. .-|++-++.|.|.. .+... T Consensus 377 ~---gG~~~~~WiD~~~g~~WL~~~iq~~l~~L~~s~~KIPytd~G~a~i~a~v~q~vl~~av~nG~I~~Gv~ls~~Q~~ 453 (515) T protein:vir:10 377 M---GGPTDPRDSNVYANEQWLKSYAGASFMSLQLAQGKIPANIEGRGLLLGKMTKDIIPAAKLNGTFSIGKTLTVDQQL 453 (515) T ss_pred e---CCccchhHHHHHhhHHHHHHHHHHHHHHHHhcCCCCccChhhHHHHHHHHHHHHHHHHHhCCeeecCcccchhHHH Confidence 3 1222466777888888888888876655443 34 456677778888874 69999999999863 21111 Q ss_pred --------------c--------------E--EecCCCEEEEEEEEEEccceeEEEEEEEEE Q lcl|Aclame:pro 532 --------------V--------------Q--VVLEGDVASISMTVMPIRSLNKITVQLVYK 563 (569) Q Consensus 532 --------------~--------------~--v~~~~d~~~v~~~v~pv~~~e~I~~ti~v~ 563 (569) + | ..++...+.+.+-...=+++.||.|..+.. T Consensus 454 ~i~~~~g~d~~~~~~~~~Gyy~~~~~~~~~~~~~r~~~~~~~~~~y~~g~~i~~i~~~~~~v 515 (515) T protein:vir:10 454 FVTELTGDDTAWQKVQNLGYWYDVQISSFVDTGGTTKYQAVYSLVYSKDDLIRKVVGTHTLI 515 (515) T ss_pred HHHhhhcCcccccchhhcceeEecCcCCCCCcccccccCceeEEEEEcCceEEEEEeeeecC Confidence 1 0 111111233334444466788888877766 No 65 >protein:vir:101576 Length: 501 # NCBI annotation: gp04 # Family: family:all:396 # MgeID: mge:1477 # MgeName: Bcep43 # Cross-refs: genbank:acc:NP_958108;genbank:gi:41057654;genbank:GeneID:2716834 Probab=98.30 E-value=1.5e-06 Score=52.51 Aligned_cols=437 Identities=11% Similarity=0.066 Sum_probs=197.9 Q ss_pred CCCccccCcceecCceEEEEEcCCCcc-ccCCCCceEEEEeccCCCCCceeEEEcChHHHHHHhcCc-chHHHHHHHhhh Q lcl|Aclame:pro 1 MAVEQFPRKKVSRPHTEITVDTSGIGG-SSSSSDKTLMLVGSAKGGKPDTVYRFRNYQQAKQVLRSG-DLLDAIELAWNA 78 (569) Q Consensus 1 ma~~~~~~~~~~~PGvyi~~~~~~~~~-~~~~~~~~~~~~g~a~~G~~~~~~~i~~~~~~~~~fg~g-~l~~~~~~~~~~ 78 (569) |.-.. +.==-||++..+=... ....+.+ ..|++....=|++++.++.|.++..+.||.. +-+.+....|+- T Consensus 1 m~~~~------ip~s~iV~V~~~v~~~~~~~~~~~-~l~l~~~~~~~~~~~~~~~s~~~V~~~FG~~S~ey~aA~~yFsg 73 (501) T protein:vir:10 1 MPTTT------IPIDQIVQMLPGVIGAGGAPGRLT-GLVLTQDTSVQPGQLADFFQETDVENWFGALSNEAKIADAYFPG 73 (501) T ss_pred CCCCC------cccceEEEEeeecccCCCccccce-eEEEeccCCCCccceEEecCHHHHHHhcCCChHHHHHHHHHhhh Confidence 44211 1223456665553222 2222333 3466667677889999999999999999964 567777888862 Q ss_pred hhhhccCCceEEEEEcC-CCccceeeccceEEEEecCCcccceeEEEEecCCCCcceEEEEEecCCceeeecccccceeE Q lcl|Aclame:pro 79 SDVNTASAGDILAVRVE-DAKNATLTKGGLTFASTIYGVDANEIQVALEDNNLTHTKRLTVAFSKDGYKKVFDNLGKIFS 157 (569) Q Consensus 79 ~~~~~~g~~~~~~~rv~-~~~~a~~~~~~l~~~a~~~G~~gn~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (569) ..-...-++++|+.|-+ .+..+.+..+.++-.. =.+++ .+. +. T Consensus 74 ~~~q~p~P~~l~igR~~~~~~~~~l~g~~l~~~~------la~~~------~~s--g~---------------------- 117 (501) T protein:vir:10 74 IVNGGQLPYDLKFARYVAADAPASVYGIPLTGVT------LAQLQ------GYS--GT---------------------- 117 (501) T ss_pred hcCCCccccEEEEEeecCCCccceEeccchhhhh------hhhcc------eee--eE---------------------- Confidence 22223457889999954 4555555433332000 00000 011 11 Q ss_pred EEecCcccceeEEEEecCccceeeeeeeccccccccceeeeeccccccccceehhh-hhhcccccceeEEecccCCc-ce Q lcl|Aclame:pro 158 IQYKGSEAQANFTIAQDSISKKATTLTLNVGSEPESTTEVMKYELGQGVYSETNVL-VSAINSLPDWEAKFFPIGDK-NL 235 (569) Q Consensus 158 v~~~G~~a~a~~~v~~~~~s~~~~~lt~~~~~~~~~~~~v~~~~l~~~~~~~~~~~-~~~i~~~~~~~~~~~~~~~~-~~ 235 (569) +++..++. +....+.+..... ...+... ...+.. +..+..+....+. .+ T Consensus 118 -----------l~vti~g~-~~~~~i~ls~ats----------------~~~vAs~i~~al~~-~~~tv~~d~~~~~f~i 168 (501) T protein:vir:10 118 -----------LTVTTAAQ-HVSANISLAAATS----------------FANAATLIEAAFTS-PDFVVAYDALRNRFTV 168 (501) T ss_pred -----------EEEeeccc-eeecccccccccC----------------HHHHHHHHhhhccC-CceEEEEcccCceEEE Confidence 11111110 0000000000000 0000000 000100 1112222211111 11 Q ss_pred ecccccchhhccccccceeehhhhhhhhhhhccCceEEEEeccCccccccceeeeecC------CCCCchhHHHHHHHHH Q lcl|Aclame:pro 236 PTDALEAVTKVDVKTEAVFVGALAGDIAKQLEYNDYVTVAVDATKPVEDFELTNLTGG------SDGTAPESWANKFPLL 309 (569) Q Consensus 236 ~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~a~~~~~~LtGG------~dg~~~~~~~~~l~~l 309 (569) ....-.. ..-|.+...++ .++. ...|+.+ ..|...++-.++++++ T Consensus 169 ts~ttG~--------------------------~~~i~~~~~~~-~la~--~l~Lt~~~~a~v~~~g~~aet~~~a~~a~ 219 (501) T protein:vir:10 169 VTNATGT--------------------------AAAISAVTGTN-NLAD--ELGLSAAAGATLQAAGVAADTPASAMNRA 219 (501) T ss_pred EeeccCC--------------------------ceeEEEeeCch-hhhh--hcCccccccceEEecCcccccHHHHHHHH Confidence 1100000 00011110000 0000 0011111 0122334556888888 Q ss_pred HhcCccE--EE-ecCCCHHHHHHHHHHHHHHhcCCCeEEEEEcCCCCCCH-----HHHHHHhhhcCCceEEEEeccceec Q lcl|Aclame:pro 310 ANEGGYY--LV-PLTDKQAVHSEALAFVKDRTDNGDPMRIIVGGGTNETV-----EESITRATNLRDPRASLVGFSGTRK 381 (569) Q Consensus 310 e~~~~~~--i~-~~~~d~~v~~~l~~~v~~~~~~g~~~~~vv~~~~~~~~-----~~~~~~a~~~n~~~v~~v~~~~~~~ 381 (569) .+...+| +. +...+.+.+.++.+|++.. .++++.+......... ..+....+.-++.|.+.++.. T Consensus 220 ~~~~~~Wy~f~~a~~~~~~~~la~A~wiea~---~~~f~~~~~~~~~~~~~~~~~~~i~~~l~~~~y~~t~~~y~~---- 292 (501) T protein:vir:10 220 VGLSRNWATFTTAWTAVIADRLAFAAWNSGQ---AYKYMYVAPDLEAASIVTNNAASFGAQVFAAPYQGTLPLYGD---- 292 (501) T ss_pred HhccCceEEEEEecCCChHHHHHHHHHHHhc---CceEEEEEecCchhhhhhhhhhhHHHHHHhcCCCceEEECCC---- Confidence 7776554 32 3445567777889999864 2344343322111111 112233344455565554421 Q ss_pred cCCcceeeechHHHHHHHHHHhhcCchhcCc---cc--eeecccccc-ccCCHHHHHHHHhcCcEEEEEecCCcceEEEE Q lcl|Aclame:pro 382 MDDGRLLKLPGYMMASQIAGIASGLEVGEAI---TF--KHFNVTSVD-RVFESSQLDMLNESGVISIEFVRNRTLTAFRV 455 (569) Q Consensus 382 ~~~g~~~~~~~~~~aa~vAG~~A~~~~~~s~---T~--~~~~~~~~~-~~~t~~e~~~l~~~Gv~~l~~~~~~~~~~~ri 455 (569) ...++.+.|..++.+..... |+ |.+. .++. ..++..|.+.|..+|.+++....+. +...++ T Consensus 293 -----------~~~~aa~~g~~as~nf~~~~g~~T~~fkq~~-~Gi~a~~lt~t~a~al~~~~~N~y~~~~~~-~~~~~~ 359 (501) T protein:vir:10 293 -----------QATAGAVMGYAASINFQLRNGRTVLAFRQFN-AGVPATAHDLPTANALRSNNYTYIGAYANA-ANNYTI 359 (501) T ss_pred -----------CcHHHHHHHHHHhhCcccCccceeeeccccC-CCcCcccCCHHHHHHHHhcCCeEEEEeccc-cceeeE Confidence 11223445667776655433 33 3332 1343 3689999999999999999765433 233455 Q ss_pred e-eceeccCCCCchhhhhhhHHHHHHHHHHHHHHHHHhcC--Ccc-cCChHHHHHHHHHHHHHHHHHHhCCcccC-CCcc Q lcl|Aclame:pro 456 V-QDVTTYNDKSDPVKNEMSVGEANDFLVSELKIELDNNF--IGT-KVIDTSASLIKNFIQSFLDNKKRAREIQD-YTPE 530 (569) Q Consensus 456 ~-~~itT~~~~~d~~~~~i~v~R~~d~i~~~i~~~~~~~~--iGk-~nn~~~~~~v~~~i~~~L~~l~~~gaI~~-~~~~ 530 (569) + ++..+ + .|..|.+.+=.|.+...++..+-+.| .+| |-++....+|++.++.-|++-.++|.|.. .+.. T Consensus 360 ~~~G~~s-G-----~~~wiD~~~~~~Wl~~~iq~~l~~ll~~~~kIPyt~~G~~~l~a~v~~~l~~av~nG~I~~Gv~l~ 433 (501) T protein:vir:10 360 AYDGKLS-G-----KFLWVDTYLDQIYLNAELQRAEFEAMLAYNSLPYNEDGYTALYRAGVDVIDAAVTSGIIRAGVTLT 433 (501) T ss_pred EecCeee-c-----cceeehhhhhHHHHHHHHHHHHHHHHHhcCCcccCHHHHHHHHHHHHHHHHHHHhCceeecCCCCC Confidence 4 34332 1 24445565544444444444332222 245 55677788999999999999999999953 2211 Q ss_pred cc---EEec--------------------------CCCE-----EEEEEEEEEccceeEEEEEEEEEe Q lcl|Aclame:pro 531 EV---QVVL--------------------------EGDV-----ASISMTVMPIRSLNKITVQLVYKQ 564 (569) Q Consensus 531 d~---~v~~--------------------------~~d~-----~~v~~~v~pv~~~e~I~~ti~v~~ 564 (569) .. ++.. .++| ..|.+.+.--.++.+|.|-.+-.- T Consensus 434 ~~q~~~i~~~~g~~~~~~~v~~~Gyy~~~~~~~~~~~~R~~R~~p~~~~~y~~~gaIh~v~i~s~~v~ 501 (501) T protein:vir:10 434 NSQLQQIDAAAGVAGAGQLVQTRGWYFLIGDPANPGQARQNRTTPACTLWYSDGGSIQQLTIGSNAVI 501 (501) T ss_pred cccceeeccccCccccccceeccceeEeeccccCChhhhhhccccceEEEEEeCCceeEEEeeeeecC Confidence 11 1110 0111 234445555556666544322111 No 66 >protein:vir:3636 Length: 501 # NCBI annotation: gp04 # Family: family:all:396 # MgeID: mge:75 # MgeName: Bcep781 # Cross-refs: genbank:acc:NP_705631;genbank:gi:23752316;genbank:GeneID:955753 Probab=98.29 E-value=1.7e-06 Score=52.27 Aligned_cols=442 Identities=11% Similarity=0.073 Sum_probs=200.2 Q ss_pred CCCccccCcceecCceEEEEEcCCCccccCCCCc-eEEEEeccCCCCCceeEEEcChHHHHHHhcCc-chHHHHHHHhhh Q lcl|Aclame:pro 1 MAVEQFPRKKVSRPHTEITVDTSGIGGSSSSSDK-TLMLVGSAKGGKPDTVYRFRNYQQAKQVLRSG-DLLDAIELAWNA 78 (569) Q Consensus 1 ma~~~~~~~~~~~PGvyi~~~~~~~~~~~~~~~~-~~~~~g~a~~G~~~~~~~i~~~~~~~~~fg~g-~l~~~~~~~~~~ 78 (569) |.-..-+ ==-+|++..+=. +..+...+ ..-|++....=|++++....+.++..+.||.. +-+.+....|+- T Consensus 1 m~~~~ip------~s~iV~V~~~v~-~~~~~~~~~~~lllt~~~~~~~~r~~~y~s~~~V~~~FG~~S~ey~aA~~yFs~ 73 (501) T protein:vir:36 1 MPTTTIP------IDQIVQMLPGVI-GAGGAPGRLTGLVLTQDTSVQPGQLADFFQETDVENWFGALSNEAKIADAYFPG 73 (501) T ss_pred CCcCCcc------cceEEEEeeeec-cCCCcceeeeeEEEeccCCCCCcceeeecCHHHHHHhcCCChHHHHHHHHHhhc Confidence 4422222 223555555422 22222222 22344555555789999999999999999974 567777888852 Q ss_pred hhhhccCCceEEEEEcC-CCccceeeccceEEEEecCCcccceeEEEEecCCCCcceEEEEEecCCceeeecccccceeE Q lcl|Aclame:pro 79 SDVNTASAGDILAVRVE-DAKNATLTKGGLTFASTIYGVDANEIQVALEDNNLTHTKRLTVAFSKDGYKKVFDNLGKIFS 157 (569) Q Consensus 79 ~~~~~~g~~~~~~~rv~-~~~~a~~~~~~l~~~a~~~G~~gn~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (569) ..-...-++++|+.|-+ .+..+.+..+.|+..+.. +++ ...+ .++ T Consensus 74 ~~~q~~~P~~l~igR~~~~a~~~~l~g~~l~~~~~a------~~~------~~sg--~l~-------------------- 119 (501) T protein:vir:36 74 IVNGGQLPYDLKFARYVAADAPASVYGIPLTGVTLA------QLQ------GYSG--TLT-------------------- 119 (501) T ss_pred ccCCCccccEEEEEeecCcCcceeEeccchhhhhhh------hcc------ceeE--EEE-------------------- Confidence 22223457889999964 444444443333210000 000 0011 111 Q ss_pred EEecCcccceeEEEEecCccceeeeeeeccccccccceeeeeccccccccceehhh-hhhcccccceeEEecccCCc-ce Q lcl|Aclame:pro 158 IQYKGSEAQANFTIAQDSISKKATTLTLNVGSEPESTTEVMKYELGQGVYSETNVL-VSAINSLPDWEAKFFPIGDK-NL 235 (569) Q Consensus 158 v~~~G~~a~a~~~v~~~~~s~~~~~lt~~~~~~~~~~~~v~~~~l~~~~~~~~~~~-~~~i~~~~~~~~~~~~~~~~-~~ 235 (569) +...|. +.+..+.+..... + ..+... ...+. .+..++.+.+..+. .+ T Consensus 120 vti~g~--------------~~~~~i~lS~~ts---------~-------~~vA~~i~~al~-~~~~tv~~d~~~~~f~i 168 (501) T protein:vir:36 120 VTTAAQ--------------HVSANISLAAATS---------F-------ANAATLIEAAFT-SPDFVVAYDALRNRFTV 168 (501) T ss_pred EEecce--------------eeeeecccccccC---------H-------HHHHHHHhhhhc-CcceEEEEcCcceeEEE Confidence 111110 0000000000000 0 000000 00000 01111112111110 11 Q ss_pred ecccccchhhccccccceeehhhhhhhhhhhccCceEEEEeccCccccccc-eeeeecCCCCCchhHHHHHHHHHHhcCc Q lcl|Aclame:pro 236 PTDALEAVTKVDVKTEAVFVGALAGDIAKQLEYNDYVTVAVDATKPVEDFE-LTNLTGGSDGTAPESWANKFPLLANEGG 314 (569) Q Consensus 236 ~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~a~~~-~~~LtGG~dg~~~~~~~~~l~~le~~~~ 314 (569) ..............+. ..++... + .+.... ..-...|.+ .+...++++++.+... T Consensus 169 ~s~t~G~~~~i~~~t~-------~~~ia~~------l--------~Lt~~~~a~v~~~g~~---~et~~~al~a~~~~s~ 224 (501) T protein:vir:36 169 VTNATGTAAAISAVTG-------TNNFADE------I--------GLSAAAGATLQAAGVA---ADTPASAMNRAVGLSR 224 (501) T ss_pred EeccCCcceeeEeeec-------ccchhhh------h--------cccccCcceEEecccc---cccHHHHHHHHHhccC Confidence 1100000000000000 0000000 0 000000 001122222 3345678888887765 Q ss_pred cE--EE-ecCCCHHHHHHHHHHHHHHhcCCCeEEEEEcCC-CCC----CHHHHHHHhhhcCCceEEEEeccceeccCCcc Q lcl|Aclame:pro 315 YY--LV-PLTDKQAVHSEALAFVKDRTDNGDPMRIIVGGG-TNE----TVEESITRATNLRDPRASLVGFSGTRKMDDGR 386 (569) Q Consensus 315 ~~--i~-~~~~d~~v~~~l~~~v~~~~~~g~~~~~vv~~~-~~~----~~~~~~~~a~~~n~~~v~~v~~~~~~~~~~g~ 386 (569) +| +. +...+.+.+.++..|++.. +++++.+.... ... .-..+....+.-++.|.+.++.. T Consensus 225 ~Wy~f~~a~~~~~~~~la~A~wiea~---~~~f~~~~~~~~~~~~~~~~~~~i~~~l~~~~y~~t~~~y~~--------- 292 (501) T protein:vir:36 225 NWATFTTAWTAVIADRLAFASWNSGQ---AYKYMYVAPDLEAASIVSNNAASFGAQVFAAPYQGTLPLYGD--------- 292 (501) T ss_pred ceEEEEEecCCChHHHHHHHHHHhhc---CceEEEEEecCchhhhhccchhhHHHHHHhcCCCcEEEEcCC--------- Confidence 55 33 3334456677899998754 23343333211 111 11123334455566666554421 Q ss_pred eeeechHHHHHHHHHHhhcCchhcCc---cc--eeecccccc-ccCCHHHHHHHHhcCcEEEEEecCCcceEEEEee-ce Q lcl|Aclame:pro 387 LLKLPGYMMASQIAGIASGLEVGEAI---TF--KHFNVTSVD-RVFESSQLDMLNESGVISIEFVRNRTLTAFRVVQ-DV 459 (569) Q Consensus 387 ~~~~~~~~~aa~vAG~~A~~~~~~s~---T~--~~~~~~~~~-~~~t~~e~~~l~~~Gv~~l~~~~~~~~~~~ri~~-~i 459 (569) ..+ ++.+.|..++.+....+ |+ |.+. .++. ..++..|.+.|..+|.+++....+.. ..+.+++ +. T Consensus 293 --~~~----~aa~~g~~as~nf~~~~g~~T~~fkq~~-~Gi~a~~l~~t~a~al~~~~~N~y~~~~~~~-~~~~~~~~G~ 364 (501) T protein:vir:36 293 --QAT----AGAVMGYAASINFQLRNGRTVLAFRQFN-AGVPATVHDLPTANALRSNNYTYIGAYANAA-NNYTIAYDGK 364 (501) T ss_pred --CCH----HHHHHHHHHhcCcccCcceeeeeccccC-CCcCcCcCCHHHHHHHHhcCCcEEEEEeccc-ceeeEEEcCe Confidence 111 23445666777665533 33 3321 2343 35788999999999999886544332 3344443 42 Q ss_pred eccCCCCchhhhhhhHHHHHHHHHHHHHHHHHhcCC--cc-cCChHHHHHHHHHHHHHHHHHHhCCcccC-CCcccc--- Q lcl|Aclame:pro 460 TTYNDKSDPVKNEMSVGEANDFLVSELKIELDNNFI--GT-KVIDTSASLIKNFIQSFLDNKKRAREIQD-YTPEEV--- 532 (569) Q Consensus 460 tT~~~~~d~~~~~i~v~R~~d~i~~~i~~~~~~~~i--Gk-~nn~~~~~~v~~~i~~~L~~l~~~gaI~~-~~~~d~--- 532 (569) .+ .+|..|.+++=.|.|...++..+-+.|. +| |=++....+|++.++.-|++-.++|.|.. .+.... T Consensus 365 ~s------G~~~wiD~~~g~dWL~~~iq~~l~~ll~~~~KIPytd~G~~~l~a~i~~~l~~av~nG~I~~Gv~~~~~q~~ 438 (501) T protein:vir:36 365 LS------GKFLWVDTYLDQIYLNAELQRAEFEAMLAYNSLPYNEDGYTGLYRAGVDVIDAAVTSGIIRAGVTLTNSQLQ 438 (501) T ss_pred ee------ccchhhhHHHhHHHHHHHHHHHHHHHHhcCCCCccChhhHHHHHHHHHHHHHHHHhCceeecCCCCCcccce Confidence 22 1356677888778888777776544442 34 45667788999999999999999999963 221111 Q ss_pred EEec--------------------------CCCE-----EEEEEEEEEccceeEEEEEEEEEe Q lcl|Aclame:pro 533 QVVL--------------------------EGDV-----ASISMTVMPIRSLNKITVQLVYKQ 564 (569) Q Consensus 533 ~v~~--------------------------~~d~-----~~v~~~v~pv~~~e~I~~ti~v~~ 564 (569) ++.. .+|| .-|.+.+.--.++.+|.|-.+-.- T Consensus 439 ~I~~~~g~~~~~~~v~~~Gyy~~~~~~~~~~~~R~~R~~p~~~~~y~~~gaIh~v~i~s~~v~ 501 (501) T protein:vir:36 439 QIDKAARVAGAGQLVQTRGWYFLIGDPANPGQARQNRTTPACTLWYSDGGSIQSLTIGSNAVI 501 (501) T ss_pred eecccccccccccceeccceEEeeCcccCChhhhhhcccCcEEEEEEeCCceeEEEeeeeeeC Confidence 1110 0111 234445555556666644322111 No 67 >protein:vir:106730 Length: 501 # NCBI annotation: gp04 # Family: family:all:396 # MgeID: mge:1599 # MgeName: Bcep1 # Cross-refs: genbank:acc:NP_944312;genbank:gi:38638611;genbank:GeneID:2657359 Probab=98.07 E-value=5.4e-06 Score=49.48 Aligned_cols=437 Identities=11% Similarity=0.063 Sum_probs=202.4 Q ss_pred CCCccccCcceecCceEEEEEcCCCc-cccCCCCceEEEEeccCCCCCceeEEEcChHHHHHHhcCc-chHHHHHHHhhh Q lcl|Aclame:pro 1 MAVEQFPRKKVSRPHTEITVDTSGIG-GSSSSSDKTLMLVGSAKGGKPDTVYRFRNYQQAKQVLRSG-DLLDAIELAWNA 78 (569) Q Consensus 1 ma~~~~~~~~~~~PGvyi~~~~~~~~-~~~~~~~~~~~~~g~a~~G~~~~~~~i~~~~~~~~~fg~g-~l~~~~~~~~~~ 78 (569) |.-..-+ ==-+|++..+=.. +....+.+. .|++....=|++++....+-++..+.||.. +-+.+....|+- T Consensus 1 m~~~~ip------~s~iV~V~~~v~~~~~~~~~f~~-lll~~~~~~~~~r~~~y~s~~~V~~~FG~~S~ey~aA~~yFsg 73 (501) T protein:vir:10 1 MPTTTIP------IDQIVQMLPGVIGAGGAPGRLTG-LVLTQDTSVQPGQLADFFQKTDVENWFGALSNEAKIADAYFPG 73 (501) T ss_pred CCcCccc------cceEEEEeeecccCCCcccccce-EEEecccCCCccceeeecCHHHHHHhcCCChHHHHHHHHHhhh Confidence 4422222 2235665555322 223333443 356666667889999999999999999964 567777888852 Q ss_pred hhhhccCCceEEEEEc-CCCccceeeccceEEEEecCCcccceeEEEEec-CCCCcceEEEEEecCCceeeeccccccee Q lcl|Aclame:pro 79 SDVNTASAGDILAVRV-EDAKNATLTKGGLTFASTIYGVDANEIQVALED-NNLTHTKRLTVAFSKDGYKKVFDNLGKIF 156 (569) Q Consensus 79 ~~~~~~g~~~~~~~rv-~~~~~a~~~~~~l~~~a~~~G~~gn~i~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (569) ..-...-++++|+.|- ..+..+.+..+.++... +.. ....+ T Consensus 74 ~~~q~p~P~~l~igR~~~~~~~~~l~g~~l~~~~-------------la~~~~~~g------------------------ 116 (501) T protein:vir:10 74 IVNGGQLPYDLKFARYVAADAPASVYGIPLTGIT-------------LAQLQGYSG------------------------ 116 (501) T ss_pred hcCCCccccEEEEEeecccCccceeeeceehhhh-------------hhhhhheee------------------------ Confidence 2222345788999995 44555555433332000 000 00011 Q ss_pred EEEecCcccceeEEEEecCccceeeeeeeccccccccceeeeeccccccccceehhh-hhhcccccceeEEecccCCc-c Q lcl|Aclame:pro 157 SIQYKGSEAQANFTIAQDSISKKATTLTLNVGSEPESTTEVMKYELGQGVYSETNVL-VSAINSLPDWEAKFFPIGDK-N 234 (569) Q Consensus 157 ~v~~~G~~a~a~~~v~~~~~s~~~~~lt~~~~~~~~~~~~v~~~~l~~~~~~~~~~~-~~~i~~~~~~~~~~~~~~~~-~ 234 (569) .+++..++. +....+.+....+ ...+... ...+.. +..+..+.+..+. . T Consensus 117 -----------~l~i~i~g~-~~~~~i~~s~ats----------------~~~vA~~i~~al~~-~~~tv~~d~~~~~f~ 167 (501) T protein:vir:10 117 -----------TLTVTTAAQ-HVSANISLAAATS----------------FANAATLIEAAFTS-PDFVVAYDALRNRFT 167 (501) T ss_pred -----------EEEEeeccc-eeeeccccccccC----------------HHHHHHHHHHhhcC-CceEEEEecccceEE Confidence 111111110 0000000000000 0000000 001100 1112222111111 0 Q ss_pred eecccccchhhccccccceeehhhhhhhhhhhccCceEEEEeccCccccccceeeeecCC------CCCchhHHHHHHHH Q lcl|Aclame:pro 235 LPTDALEAVTKVDVKTEAVFVGALAGDIAKQLEYNDYVTVAVDATKPVEDFELTNLTGGS------DGTAPESWANKFPL 308 (569) Q Consensus 235 ~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~a~~~~~~LtGG~------dg~~~~~~~~~l~~ 308 (569) +....... ..-+.+.. +.+.++. ...|+.++ .|...+.-.+++++ T Consensus 168 i~~~t~G~--------------------------~~~i~~~t-~~~d~a~--~l~Lt~~~~a~v~~~g~~aet~~~Al~a 218 (501) T protein:vir:10 168 VVTNTTGT--------------------------AAAISAVT-GTNNLAD--ELGLSAAAGATLQAAGVAADTPASAMNR 218 (501) T ss_pred EEecccCc--------------------------ceeEEEee-ccccchh--hhcccccCceeEEecCcccccHHHHHHH Confidence 10000000 00001000 0000110 01111110 12233455688888 Q ss_pred HHhcCccE--EE-ecCCCHHHHHHHHHHHHHHhcCCCeEEEEEcCC-CCC---C-HHHHHHHhhhcCCceEEEEecccee Q lcl|Aclame:pro 309 LANEGGYY--LV-PLTDKQAVHSEALAFVKDRTDNGDPMRIIVGGG-TNE---T-VEESITRATNLRDPRASLVGFSGTR 380 (569) Q Consensus 309 le~~~~~~--i~-~~~~d~~v~~~l~~~v~~~~~~g~~~~~vv~~~-~~~---~-~~~~~~~a~~~n~~~v~~v~~~~~~ 380 (569) +.+...+| +. +...+.+.+.++.+|++... ++++.+.... ... . -..+....+.-++.|...++.. T Consensus 219 ~~~~~~~Wy~f~~a~~~~~~~~la~A~wi~a~~---~~f~~~~~~~~~~~~~~~~~~~i~~~l~~~~y~~t~~~y~~--- 292 (501) T protein:vir:10 219 AVGLSRNWATFTTAWTAVIADRLAFAAWNSGQA---YKYMYVAPDLEAASIVTNNAASFGAQVFAAPYQGTLPLYGD--- 292 (501) T ss_pred HHhcccceEEEEEEecCChHHHHHHHHHHHhcC---ceEEEEEecCcceeeecccchhHHHHHHhcCCCceEEECCC--- Confidence 88776555 32 33445667778899987542 3443333211 111 0 1122233444456665554421 Q ss_pred ccCCcceeeechHHHHHHHHHHhhcCchhcCc---cceeecc-cccc-ccCCHHHHHHHHhcCcEEEEEecCCcceEEEE Q lcl|Aclame:pro 381 KMDDGRLLKLPGYMMASQIAGIASGLEVGEAI---TFKHFNV-TSVD-RVFESSQLDMLNESGVISIEFVRNRTLTAFRV 455 (569) Q Consensus 381 ~~~~g~~~~~~~~~~aa~vAG~~A~~~~~~s~---T~~~~~~-~~~~-~~~t~~e~~~l~~~Gv~~l~~~~~~~~~~~ri 455 (569) ...++.+.|..++.+..... |++=-.. .++. ..++..|.+.|..+|.+++....+.. ..+++ T Consensus 293 ------------~~~~aa~~g~~as~nf~~~~g~~T~~fkql~~Gv~a~~l~~t~a~al~~~~~N~y~~~~~~~-~~~~~ 359 (501) T protein:vir:10 293 ------------QATAGAVMGYAASINFQLRNGRTVLAFRQFNAGVPATAHDLPTANALRSNNYTYIGAYANAA-NNYTI 359 (501) T ss_pred ------------CCHHHHHHHHHHhcCcccCcceeeeeecccCCCcCcccCCHHHHHHHHhcCCeEEEEEeccc-ceeeE Confidence 11223445666777655433 3321122 2333 36889999999999999986544332 33444 Q ss_pred e-eceeccCCCCchhhhhhhHHHHHHHHHHHHHHHHHhcC--Ccc-cCChHHHHHHHHHHHHHHHHHHhCCcccC-CCcc Q lcl|Aclame:pro 456 V-QDVTTYNDKSDPVKNEMSVGEANDFLVSELKIELDNNF--IGT-KVIDTSASLIKNFIQSFLDNKKRAREIQD-YTPE 530 (569) Q Consensus 456 ~-~~itT~~~~~d~~~~~i~v~R~~d~i~~~i~~~~~~~~--iGk-~nn~~~~~~v~~~i~~~L~~l~~~gaI~~-~~~~ 530 (569) + ++..+ + .|..|.+.+=.|.+...++..+-+.| .+| |=++....+|++.++.-|++-.++|.|.. .+.. T Consensus 360 ~~~G~~s-G-----~~~wiD~~~g~dWl~~~iq~~l~~ll~~~~kIPyt~~G~~~l~a~i~~~l~~av~nG~Ia~Gv~l~ 433 (501) T protein:vir:10 360 AYDGKLS-G-----KFLWVDTYLDQIYLNAELQRAEFEAMLAYNSLPYNEDGYTANYRAGVDVIDAAVTSGIIRAGVTLT 433 (501) T ss_pred EEcceee-c-----cceehhhHhhHHHHHHHHHHHHHHHHhcCCCcccCHHHHHHHHHHHHHHHHHHHhCcceecCcccC Confidence 4 33322 1 35556677777777777766554333 244 45677788999999999999999999953 2111 Q ss_pred cc---EEecC-------CC------------------------EEEEEEEEEEccceeEEEEEEEEEe Q lcl|Aclame:pro 531 EV---QVVLE-------GD------------------------VASISMTVMPIRSLNKITVQLVYKQ 564 (569) Q Consensus 531 d~---~v~~~-------~d------------------------~~~v~~~v~pv~~~e~I~~ti~v~~ 564 (569) .. ++..+ .| ...|.+.+.--.++.+|.|-.+-.- T Consensus 434 ~~q~~~i~~~~g~~~~~~~v~~~Gyy~~~~~~~~~~~~R~~R~~p~~~~~y~~~gaIh~v~i~s~~v~ 501 (501) T protein:vir:10 434 NSQLQQIDAVAGVAGAGALVQTRGWYFLIGNPANPGQARQNRTSPACTLWYSDGGSIQELTIGSNAVI 501 (501) T ss_pred cccceeecccccccccccceeccceEEeeCcccCChhhhhhcccCceEEEEEeCCceeEEEeeeeecC Confidence 11 11100 01 1234445555556666644332221 No 68 >protein:vir:78611 Length: 501 # NCBI annotation: BcepNY3gp03 # Family: family:all:396 # MgeID: mge:1854 # MgeName: BcepNY3 # Cross-refs: genbank:acc:YP_001294840;genbank:gi:149882903;genbank:GeneID:5291082 Probab=97.83 E-value=1.6e-05 Score=46.82 Aligned_cols=436 Identities=11% Similarity=0.058 Sum_probs=195.4 Q ss_pred CCCccccCcceecCceEEEEEcCCCccccCCCCceEEEEeccCCCCCceeEEEcChHHHHHHhcCc-chHHHHHHHhhhh Q lcl|Aclame:pro 1 MAVEQFPRKKVSRPHTEITVDTSGIGGSSSSSDKTLMLVGSAKGGKPDTVYRFRNYQQAKQVLRSG-DLLDAIELAWNAS 79 (569) Q Consensus 1 ma~~~~~~~~~~~PGvyi~~~~~~~~~~~~~~~~~~~~~g~a~~G~~~~~~~i~~~~~~~~~fg~g-~l~~~~~~~~~~~ 79 (569) |.-..-+ ==-+|++..+=.......-.-..-|++....=|++++..+.+-++..+.||.. +-+.+...+|+-. T Consensus 1 m~~~~ip------~s~iV~V~~~v~~~~~~~~~~~~lll~~~~~~~~~r~~~y~s~~~V~~~FG~~S~ey~aA~~yFs~~ 74 (501) T protein:vir:78 1 MPTTTIP------IDQIVQMLPGVIGAGGAPGRLTGLVLTQDTSIQPGQLADFFQKTDVENWFGGLSNEAVIADAYFPGI 74 (501) T ss_pred CCcCccc------cceEEEEeeecccCCCcceeeeeEEEecCCCCCccceeeecCHHHHHHhcCCChHHHHHHHHHhhcC Confidence 4422222 22356655553322222222223355656666889999999999999999974 5677778888522 Q ss_pred hhhccCCceEEEEEcC-CCccceeeccceEEEEecCCcccceeEEEEecC-CCCcceEEEEEecCCceeeecccccceeE Q lcl|Aclame:pro 80 DVNTASAGDILAVRVE-DAKNATLTKGGLTFASTIYGVDANEIQVALEDN-NLTHTKRLTVAFSKDGYKKVFDNLGKIFS 157 (569) Q Consensus 80 ~~~~~g~~~~~~~rv~-~~~~a~~~~~~l~~~a~~~G~~gn~i~v~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (569) .-...-++++|+.|-+ .+..+.+..+.|+... +..- ... +.+ T Consensus 75 ~~q~~~P~~l~igR~~~~a~~~~l~g~~l~~~~-------------la~~~~~~--G~l--------------------- 118 (501) T protein:vir:78 75 VNGGQLPYDLKFARYVAADAPASVYGIPLTGVT-------------LTQLQGYS--GTL--------------------- 118 (501) T ss_pred CCCCcccceEEEEeecccCcceeEeccceeccc-------------hhhhceee--eEE--------------------- Confidence 2223457789999954 4455554433332100 0000 000 111 Q ss_pred EEecCcccceeEEEEecCccceeeeeeeccccccccceeeeeccccccccceehh-hhhhcccccceeEEecccCCc-ce Q lcl|Aclame:pro 158 IQYKGSEAQANFTIAQDSISKKATTLTLNVGSEPESTTEVMKYELGQGVYSETNV-LVSAINSLPDWEAKFFPIGDK-NL 235 (569) Q Consensus 158 v~~~G~~a~a~~~v~~~~~s~~~~~lt~~~~~~~~~~~~v~~~~l~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~~~-~~ 235 (569) ++..++. +.+..+.+..... ...+.. ....+.. +..+..+....+. .+ T Consensus 119 ------------~iti~g~-~~~~~i~~S~~ts----------------~~~vA~~i~~al~a-~~~tv~~ds~~~~f~i 168 (501) T protein:vir:78 119 ------------TVTTAAQ-HVSSNISLAAATS----------------FANAATLIEAAFTS-PDFVVSYDALRNRFVV 168 (501) T ss_pred ------------EEEeccc-eeeeccccccccC----------------HHHHHHHHHhhhcC-cceEEEEccccceEEE Confidence 1111110 0000000000000 000000 0000100 1111111111110 00 Q ss_pred ecccccchhhccccccceeehhhhhhhhhhhccCceEEEEeccCccccc------cceee-eecCCCCCchhHHHHHHHH Q lcl|Aclame:pro 236 PTDALEAVTKVDVKTEAVFVGALAGDIAKQLEYNDYVTVAVDATKPVED------FELTN-LTGGSDGTAPESWANKFPL 308 (569) Q Consensus 236 ~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~a~------~~~~~-LtGG~dg~~~~~~~~~l~~ 308 (569) ....... ..-+.+...+ ..++. ..... ...| ...++..+++++ T Consensus 169 ts~t~G~--------------------------~~~i~~~t~~-~~~a~~l~Lt~~~~a~v~~~g---~~aet~~~a~~a 218 (501) T protein:vir:78 169 NTNATGT--------------------------AAAISAVTGT-NNLADELGLSAAAGASLQAAG---VAADTPASAMNR 218 (501) T ss_pred EeeecCC--------------------------ceeEEEEecc-cchhhhhcccccCceeeEecc---ccccCHHHHHHH Confidence 0000000 0001110000 00000 00000 1122 223456688888 Q ss_pred HHhcCccE--EE-ecCCCHHHHHHHHHHHHHHhcCCCeEEEEEc-CCCCCC----HHHHHHHhhhcCCceEEEEecccee Q lcl|Aclame:pro 309 LANEGGYY--LV-PLTDKQAVHSEALAFVKDRTDNGDPMRIIVG-GGTNET----VEESITRATNLRDPRASLVGFSGTR 380 (569) Q Consensus 309 le~~~~~~--i~-~~~~d~~v~~~l~~~v~~~~~~g~~~~~vv~-~~~~~~----~~~~~~~a~~~n~~~v~~v~~~~~~ 380 (569) +.+...+| +. +...+.+.+.++.+|++... ++++.+.. .+.... -..+....+.-++.|.+.++.. T Consensus 219 ~~~~~~~Wy~f~~a~~~~~~~~lalA~wiea~~---~~f~~~~~~~~~~~~~~~~~~~i~~~l~a~~y~~t~~~y~~--- 292 (501) T protein:vir:78 219 AVGLSRNWATFTTAWTAVIADRLALASWNSGQA---YKYMYVAPDLEPASIVTNNSASFGAQVFAAPYQGTLPLYGD--- 292 (501) T ss_pred HHhccCceEEEEEecCCCHHHHHHHHHHHHhcC---ceEEEEEecCCcceeecccchhHHHHHhhcCCCceEEEcCC--- Confidence 88776554 33 34455677778999998642 33333332 111110 1112233444456665554421 Q ss_pred ccCCcceeeechHHHHHHHHHHhhcCchhcCc---cc--eeeccccccc-cCCHHHHHHHHhcCcEEEEEecCCcceEEE Q lcl|Aclame:pro 381 KMDDGRLLKLPGYMMASQIAGIASGLEVGEAI---TF--KHFNVTSVDR-VFESSQLDMLNESGVISIEFVRNRTLTAFR 454 (569) Q Consensus 381 ~~~~g~~~~~~~~~~aa~vAG~~A~~~~~~s~---T~--~~~~~~~~~~-~~t~~e~~~l~~~Gv~~l~~~~~~~~~~~r 454 (569) + ..++.+.|..++.+..... |+ |.+. .++.. .++..|.+.|..+|.+++....+. +..++ T Consensus 293 -----------~-~~~aa~~g~~as~nf~~~~g~~T~~fkq~~-~Gv~a~~l~~t~a~al~~~~~N~y~~~~~~-~~~~~ 358 (501) T protein:vir:78 293 -----------Q-ATAGAVMGYAASINFQLRNGRTVLAFRQFN-AGVPATAHDLGTANALRSNNYTYIGAYANA-ANNYT 358 (501) T ss_pred -----------c-chHHHHHHHHHhcCcccCcceeeeeccccC-CCcCcccCCHHHHHHHHhcCCeEEEEEecc-cceee Confidence 1 1223445666777655433 33 3321 23433 578999999999999998654332 23345 Q ss_pred Eee-ceeccCCCCchhhhhhhHHHHHHHHHHHHHHHHHhcC--Ccc-cCChHHHHHHHHHHHHHHHHHHhCCcccC-CCc Q lcl|Aclame:pro 455 VVQ-DVTTYNDKSDPVKNEMSVGEANDFLVSELKIELDNNF--IGT-KVIDTSASLIKNFIQSFLDNKKRAREIQD-YTP 529 (569) Q Consensus 455 i~~-~itT~~~~~d~~~~~i~v~R~~d~i~~~i~~~~~~~~--iGk-~nn~~~~~~v~~~i~~~L~~l~~~gaI~~-~~~ 529 (569) +++ +..+ + .|..|.+.+=.|.+...++..+-+.| .+| |-++....+|++.++.-|++-.++|.|.. ... T Consensus 359 ~~~~G~~s-G-----~~~wiD~~~~~~Wl~~~iq~~l~~ll~~~~kIPyt~~G~~~l~a~v~~~l~~av~nG~I~~Gv~l 432 (501) T protein:vir:78 359 IAYDGKLS-G-----KFLWVDTYLDQIYLNAELQRAEFEAMLAYNSLPYNEDGYTALYRAGVDVIDAAVTSGIIRAGVTL 432 (501) T ss_pred EEEcCeee-c-----cceeehhhhhHHHHHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHHHHHHHHHhCceeecCCCC Confidence 543 3322 1 24445566655555555544332222 245 55677788999999999999999999963 211 Q ss_pred ccc---EEecC-------CC------------------------EEEEEEEEEEccceeEEEEEEEEEe Q lcl|Aclame:pro 530 EEV---QVVLE-------GD------------------------VASISMTVMPIRSLNKITVQLVYKQ 564 (569) Q Consensus 530 ~d~---~v~~~-------~d------------------------~~~v~~~v~pv~~~e~I~~ti~v~~ 564 (569) ... ++... .| ...|.+.+.--.++.+|.|-.+-.- T Consensus 433 ~~~q~~~I~~~~g~~~~~~~~~~~Gyy~~~~~~~~~~~~R~~R~~p~~~~~y~~~gaIh~v~i~s~~v~ 501 (501) T protein:vir:78 433 TNSQLQQIDAAAGVAGAGQLVQMRGWYFLIGDPANPGQARQNRTTPTCTLWYSDGGSIQELTIGSNAVI 501 (501) T ss_pred CCccceeeccccCccccccceeccceEEeeccccCChhhhhhcccCcEEEEEEeCCceeEEEeeeeecC Confidence 111 11100 01 1234444455555666543322111 No 69 >protein:vir:96586 Length: 587 # NCBI annotation: ORF011 # Family: family:all:2449 # MgeID: mge:1623 # MgeName: Twort # Cross-refs: genbank:acc:YP_238553;genbank:gi:66391266;genbank:GeneID:5130368 Probab=91.68 E-value=0.015 Score=30.63 Aligned_cols=443 Identities=9% Similarity=0.047 Sum_probs=138.8 Q ss_pred CCCccccCcceecC--ceEEEEEcCCCccccCCCCceEEEE--e----ccCCCCCcee-EEEcChHHHHHHhcCcchHHH Q lcl|Aclame:pro 1 MAVEQFPRKKVSRP--HTEITVDTSGIGGSSSSSDKTLMLV--G----SAKGGKPDTV-YRFRNYQQAKQVLRSGDLLDA 71 (569) Q Consensus 1 ma~~~~~~~~~~~P--Gvyi~~~~~~~~~~~~~~~~~~~~~--g----~a~~G~~~~~-~~i~~~~~~~~~fg~g~l~~~ 71 (569) -+|-.+...+|-.= -+.+...+.+ +.+.-+-.+.+- + .-.|||+... +..++..+...+||.+.-.+| T Consensus 102 ~~~~~~~~~~~g~~~n~i~v~~~~~~---~~~~~~~~~~~~~~~~~~~~~n~G~v~~i~y~g~~~~a~~~~~~~~~~~~A 178 (587) T protein:vir:96 102 KGGLRVTSKIFGSVSNDIQVALEKNT---ITDSLRLRVVFQKDNYQEVFDNLGNIFSINYKGEGEKATFSVEKDKETQEA 178 (587) T ss_pred cccccccccccCCCCceEEEEEEecc---CCCccceEEEEecCCceeeccccCceEEEEecccccceeEeeccCccccee Confidence 11111111111000 0111121111 111111111110 1 1234443211 122333344455654333455 Q ss_pred HHHHhhhhhhhccCCceEEEEEcCCCcccee------eccceEEEEecCCcccceeEEEEecCCCCcc-eEEEEEecCCc Q lcl|Aclame:pro 72 IELAWNASDVNTASAGDILAVRVEDAKNATL------TKGGLTFASTIYGVDANEIQVALEDNNLTHT-KRLTVAFSKDG 144 (569) Q Consensus 72 ~~~~~~~~~~~~~g~~~~~~~rv~~~~~a~~------~~~~l~~~a~~~G~~gn~i~v~~~~~~~~~~-~~~~~~~~~~~ 144 (569) ..+++ ..|+++++.||++++..+++ +.....++|++||.+||++.+.+.++..... +.+.. +.... T Consensus 179 ~~l~l------~gg~~~v~~yrl~~g~~~~~~~~~~~~~~~~~~tAky~g~~~n~~~v~v~d~~~~~~~k~~~~-y~~t~ 251 (587) T protein:vir:96 179 KRLVL------KVDEKEVKAYELNGGAYSFTNEIITDINELPDFEAKLSPFGDKNLESRKLDEATDVDIKGKAV-YVKAV 251 (587) T ss_pred eeeEE------EecCceEEEEEeCCCchhhhhhhhhhhccccceEEEeecccCceeEEEeeccccccccceEEE-eehhh Confidence 45544 45788999999987653322 1234579999999999999998876643322 22222 21111 Q ss_pred eeeec-ccccceeEEEecCcccceeEEEEecCccceeeeeeeccccccccceeeeeccccccccceehhhhhhcccccce Q lcl|Aclame:pro 145 YKKVF-DNLGKIFSIQYKGSEAQANFTIAQDSISKKATTLTLNVGSEPESTTEVMKYELGQGVYSETNVLVSAINSLPDW 223 (569) Q Consensus 145 ~~~~~-~~~~~~~~v~~~G~~a~a~~~v~~~~~s~~~~~lt~~~~~~~~~~~~v~~~~l~~~~~~~~~~~~~~i~~~~~~ 223 (569) ..... ....+.+ +...+....... ........ ....... ....+. ..+...+. T Consensus 252 ~~di~~~~~~~~~-~~~~~~~~~~~~----------~~~~~v~~--~~~~~~~----~~~~~~--------~~~~~~~~- 305 (587) T protein:vir:96 252 FGDIENQTQYNQY-VKFEQLPEQASE----------PSDVEVHA--ETESATV----TATSKP--------KAIEPFEL- 305 (587) T ss_pred hhhhhhhhccccc-eeeccccchhhh----------hhcccccc--cccceee----eecccc--------cccccccc- Confidence 00000 0000000 000000000000 00000000 0000000 000000 00000000 Q ss_pred eEEecccCCcceecccccchhhccccccceeehhhhhhhhhhhccCceEEEEeccCccccccceeeeecCCCC-CchhHH Q lcl|Aclame:pro 224 EAKFFPIGDKNLPTDALEAVTKVDVKTEAVFVGALAGDIAKQLEYNDYVTVAVDATKPVEDFELTNLTGGSDG-TAPESW 302 (569) Q Consensus 224 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~a~~~~~~LtGG~dg-~~~~~~ 302 (569) ++.-.+..+ .. .....+..+.++..++-. +...++. ..-... T Consensus 306 ~aLtGG~dG-~~--------------------~~~y~~~l~ale~~~~~~----------------i~~~t~d~ai~~~l 348 (587) T protein:vir:96 306 TKLSGGTNG-EP--------------------PTSWSAKLEKFKNEGGYY----------------IVPLTDRQSVHSEV 348 (587) T ss_pred eeeecCCCC-CC--------------------cccHHHHHHHHhhCCcEE----------------EEecCCCHHHHHHH Confidence 000000000 00 001111222233222211 1112221 222335 Q ss_pred HHHHHHHHhcCccEEEec--CCCHHHHHHHHHHHHHHhcCCCeEEEEEcCCCCCCHHHHHHHhhhcCCceEEEEecc--c Q lcl|Aclame:pro 303 ANKFPLLANEGGYYLVPL--TDKQAVHSEALAFVKDRTDNGDPMRIIVGGGTNETVEESITRATNLRDPRASLVGFS--G 378 (569) Q Consensus 303 ~~~l~~le~~~~~~i~~~--~~d~~v~~~l~~~v~~~~~~g~~~~~vv~~~~~~~~~~~~~~a~~~n~~~v~~v~~~--~ 378 (569) ...++.+.+..-..+.+. ....... ...+|.+.. ..+++..+..+. ......+ . T Consensus 349 ~a~vk~~r~~gk~~~aVlg~~~~~~~~-~~~~~a~~~---n~e~vi~v~~~~------------------~~~~~~~~~~ 406 (587) T protein:vir:96 349 ATFVKNRSDAGEPMRAIVGGGTSETKE-KLFGRQAIL---NNPRVALVANSG------------------KFVMGNGRIL 406 (587) T ss_pred HHHHHHHHhCCCeEEEEecCCCCCCHH-HHHHHHhhc---CCCcEEEEecce------------------EEecCCCcee Confidence 555566655433333322 2222222 223333333 234555554321 1111000 0 Q ss_pred eeccCCcceeeechHHHHHHHHHHhhcCchhc-Cccceee----ccccccccCCHHHHHH-HHhcC-cEEEEEecCCcce Q lcl|Aclame:pro 379 TRKMDDGRLLKLPGYMMASQIAGIASGLEVGE-AITFKHF----NVTSVDRVFESSQLDM-LNESG-VISIEFVRNRTLT 451 (569) Q Consensus 379 ~~~~~~g~~~~~~~~~~aa~vAG~~A~~~~~~-s~T~~~~----~~~~~~~~~t~~e~~~-l~~~G-v~~l~~~~~~~~~ 451 (569) .+.. ....+..|+.+||+-...++.- .+....+ .-..++.-+....+-- ..+.+ +.+++ T Consensus 407 ~~~~------~~~aa~vAG~~Ag~~~~~S~T~~~~~~~~v~~~~t~~e~~~~i~~G~~~l~~~~~~~~~v~~-------- 472 (587) T protein:vir:96 407 QAPA------YMVASAVAGLVSGLDIGESITFKPLFVNSLDKVYESEELDELNENGIITIEFVRNRMTTMFR-------- 472 (587) T ss_pred eech------hhHHHHHHHHHhcCccccCccceeeecccccccCCHHHHHHHHhCCeEEEEEecCCcEEEEE-------- Confidence 0000 0123455666666654433321 1111111 0001111111110000 00111 11111 Q ss_pred EEEEeeceeccCCCCchhhhhhhHHHHHHHHHHH-HHHHHHhcCCcccCChHHHHHHHHHHHHHHHHHHhCCc----cc- Q lcl|Aclame:pro 452 AFRVVQDVTTYNDKSDPVKNEMSVGEANDFLVSE-LKIELDNNFIGTKVIDTSASLIKNFIQSFLDNKKRARE----IQ- 525 (569) Q Consensus 452 ~~ri~~~itT~~~~~d~~~~~i~v~R~~d~i~~~-i~~~~~~~~iGk~nn~~~~~~v~~~i~~~L~~l~~~ga----I~- 525 (569) .++-....|.-.+..-..++-+++...+..=.+. +++.+--...-..+....|..++..++.+...-.-++. ++ T Consensus 473 ~vnsitT~t~~~~~~~~~i~virv~D~i~~di~~~~~~~yiGk~nn~~~r~~v~~~i~~~L~~l~~~g~I~~~~~~dv~v 552 (587) T protein:vir:96 473 IVDDVTTFPDKNDPVKSEMALGEANDFLVSELKILLEEQYIGTRTINTSASQIKDFVQSYLGRKKRDNEIQDFPPEDVQV 552 (587) T ss_pred eeccceecCCCCCchhhhhhhHHHHHHHHHHHHHHHHhcCCccccCHHHHHHHHHHHHHHHHHHHhCCcccCCCccceEE Confidence 0111111222222222234444444444333332 22222111122333334455665655555433222221 11 Q ss_pred CCCcccc--EEec----CCCEEEEEEEEEE--ccc Q lcl|Aclame:pro 526 DYTPEEV--QVVL----EGDVASISMTVMP--IRS 552 (569) Q Consensus 526 ~~~~~d~--~v~~----~~d~~~v~~~v~p--v~~ 552 (569) ....+.+ .+.. .-+++|+.+.++| +-+ T Consensus 553 ~~~~D~~~v~~~v~Pv~~mekIy~tv~~~~~~~~~ 587 (587) T protein:vir:96 553 IIEGNEARISLTIFPIRALKKISVSLVYRQQTLQA 587 (587) T ss_pred EecCCEEEEEEEEEEcccceEEEEEEEEEeeeecC Confidence 1111111 2122 2467899888877 222 No 70 >protein:vir:3165 Length: 426 # NCBI annotation: capsid protein CP67 # Family: family:all:28419 # MgeID: mge:316 # MgeName: PhiCh1 # Cross-refs: genbank:acc:NP_665936;genbank:gi:22091122;genbank:GeneID:951267 Probab=86.77 E-value=0.043 Score=28.06 Aligned_cols=394 Identities=15% Similarity=0.135 Sum_probs=173.8 Q ss_pred CCCccccCcceecCceEEEEEcCCCccccCCCCceEEEEeccCCCCC----ceeEEEcChHHHHHHhcC-cchHHHHHHH Q lcl|Aclame:pro 1 MAVEQFPRKKVSRPHTEITVDTSGIGGSSSSSDKTLMLVGSAKGGKP----DTVYRFRNYQQAKQVLRS-GDLLDAIELA 75 (569) Q Consensus 1 ma~~~~~~~~~~~PGvyi~~~~~~~~~~~~~~~~~~~~~g~a~~G~~----~~~~~i~~~~~~~~~fg~-g~l~~~~~~~ 75 (569) |- ++=|-|+..-+ ..++..-+.+.+.|+|...-=|| +++.+.++.++...-||. .+.+.|.... T Consensus 1 m~----------~~iVnV~Is~~-t~A~~~~~Fg~~liigs~~~~~p~~~f~~~~~Yss~~~V~~Dfg~~s~~Y~AA~~~ 69 (426) T protein:vir:31 1 MP----------KQIVEIELTAE-IADRPQETFTDAAIVGTAEEEPPDAEFGEVNQYSTSTSVGDDYGEDSDVYTASEAI 69 (426) T ss_pred CC----------cceEEEEeecc-cccccccccceeeeeeeccccccccccchhhhhhhHHHHHhcCCCChHHHHHHHHH Confidence 32 23344444333 45677777899999999987665 457778888999999985 4577887887 Q ss_pred hhhhhhhccCCceEEEEEcCCCccceeeccceEEEEecCCcccceeEEEEecCCCCcceEEEEEecCCceeeecccccce Q lcl|Aclame:pro 76 WNASDVNTASAGDILAVRVEDAKNATLTKGGLTFASTIYGVDANEIQVALEDNNLTHTKRLTVAFSKDGYKKVFDNLGKI 155 (569) Q Consensus 76 ~~~~~~~~~g~~~~~~~rv~~~~~a~~~~~~l~~~a~~~G~~gn~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (569) |+ +| ++..|.....+...+ ..... ...++. + T Consensus 70 f~------Q~---~~~~r~~v~~at~~~----------------------~~~~t-~~~tv~---------------g-- 100 (426) T protein:vir:31 70 EE------MG---AEQWRVMVLEATEVT----------------------EEELS-DGDTID---------------K-- 100 (426) T ss_pred Hh------CC---ceeEEeeccccceee----------------------eccCC-cceeec---------------c-- Confidence 74 23 344443111111000 00000 000000 0 Q ss_pred eEEEecCcccceeEEEEecCccceeeeeeeccccccccceeeeeccccccccceehhhhhhcccccceeEEecccCCcce Q lcl|Aclame:pro 156 FSIQYKGSEAQANFTIAQDSISKKATTLTLNVGSEPESTTEVMKYELGQGVYSETNVLVSAINSLPDWEAKFFPIGDKNL 235 (569) Q Consensus 156 ~~v~~~G~~a~a~~~v~~~~~s~~~~~lt~~~~~~~~~~~~v~~~~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 235 (569) +-+++.+.. .+... .....+..-++.+... ..+ T Consensus 101 --~~~s~~a~~--------------------~~~a~--------------------~i~~~~~~~~~~~~~~-----~~~ 133 (426) T protein:vir:31 101 --VPILGNHEV--------------------ESPDG--------------------DIEFTTDDDPDVEDFD-----AEI 133 (426) T ss_pred --eeeeecccC--------------------cchHH--------------------HHHHhhccccccccce-----eee Confidence 000000000 00000 0000000000000000 000 Q ss_pred ecccccchhhccccccceeehhhhhhhhhhhccCceEEEEeccCccccccceeeeecCCCCCchhHHHHHHHHHHhcCcc Q lcl|Aclame:pro 236 PTDALEAVTKVDVKTEAVFVGALAGDIAKQLEYNDYVTVAVDATKPVEDFELTNLTGGSDGTAPESWANKFPLLANEGGY 315 (569) Q Consensus 236 ~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~a~~~~~~LtGG~dg~~~~~~~~~l~~le~~~~~ 315 (569) ..+..+ .+++... ..+....+++ ||. .++.+.. +.+ T Consensus 134 ~~~t~~----------------------------g~~t~~~-------~~~~~~~s~~-------dw~-~~~~~~s-~~~ 169 (426) T protein:vir:31 134 VINSAT----------------------------GDVATSE-------DSIELTYFHA-------DWS-QLDEFPS-DVN 169 (426) T ss_pred Eecccc----------------------------ceeeccc-------cceeeeeccC-------cch-hhhcccc-cch Confidence 000000 0000000 0000001110 121 1111110 000 Q ss_pred EEEecC-----CCHHHHHHHHHHHHHHhcCCCeEEEEEcCCCCCCHHHHHHHhhhcCCceEEEEeccceeccCCcceeee Q lcl|Aclame:pro 316 YLVPLT-----DKQAVHSEALAFVKDRTDNGDPMRIIVGGGTNETVEESITRATNLRDPRASLVGFSGTRKMDDGRLLKL 390 (569) Q Consensus 316 ~i~~~~-----~d~~v~~~l~~~v~~~~~~g~~~~~vv~~~~~~~~~~~~~~a~~~n~~~v~~v~~~~~~~~~~g~~~~~ 390 (569) ....+. .+..+-..+..|. .++ ..+.|...-...+++.. ...-+..+.-.- +.|+...... ....- T Consensus 170 ~~~ia~~~~~~~~~~~~~~~~~wa---~~~--~i~~va~~~e~~~~~~~-~~~~a~~~~~~~-y~p~~~~~~~--~~~~~ 240 (426) T protein:vir:31 170 NFAVADRRFDLKGVGVLDETHSWA---SDE--DMGMIANGVNVDDYDSV-DEAMDVAHEVAG-YVPSGDLMMI--VDASD 240 (426) T ss_pred hhhhhccccchhhhhhhHhhhhhh---hhc--ceeeeeeccchhhhcch-hhhhhhhhcccc-cccchhheee--hhccc Confidence 000000 0111111222332 111 12222211111111111 000000010000 1111100000 00001 Q ss_pred chHHHHHHHHHHhhcCchhcCccceeecc----------ccccccCCHHHHHHHHhcCcEEEEEecCCcceEEEEeecee Q lcl|Aclame:pro 391 PGYMMASQIAGIASGLEVGEAITFKHFNV----------TSVDRVFESSQLDMLNESGVISIEFVRNRTLTAFRVVQDVT 460 (569) Q Consensus 391 ~~~~~aa~vAG~~A~~~~~~s~T~~~~~~----------~~~~~~~t~~e~~~l~~~Gv~~l~~~~~~~~~~~ri~~~it 460 (569) + ...+|+++.++..++..+|+.+.+.. .++...+..++ ....++-.+.|+...+ ..++.++++ T Consensus 241 ~--~~~~~~~~~~aa~~~~~~~~~~~~~~~~~~~~~~~~~gv~~t~~~~~-~A~~~~~~n~~~~~~~----~~~i~~~~~ 313 (426) T protein:vir:31 241 D--DLAAYQLGKFAVSEPWYNPLWNELPAGETVSKNVGDPEEQGTFEGGD-EAEGEGPVNVLIDVSD----ANRVSNAVT 313 (426) T ss_pred c--chhhHHhhhhhhhccccchhhhhccccccceeeccccccccccchhh-hhhhcCCceEEEEecC----ceeeeccee Confidence 1 23578999999998877776554421 12222333333 3345566777775433 357888888 Q ss_pred ccCCCCchhhhhhhHHHHHHHHHHHHHHHHHhcCCc--c-cCChHHHHHHHHHHHHHHHHHHhCCc--ccCCC-----cc Q lcl|Aclame:pro 461 TYNDKSDPVKNEMSVGEANDFLVSELKIELDNNFIG--T-KVIDTSASLIKNFIQSFLDNKKRARE--IQDYT-----PE 530 (569) Q Consensus 461 T~~~~~d~~~~~i~v~R~~d~i~~~i~~~~~~~~iG--k-~nn~~~~~~v~~~i~~~L~~l~~~ga--I~~~~-----~~ 530 (569) |.+...+-. +|=++|..|++...|+..+.+.++. | |=++....+|++.|++-|++..+.|. +.+|. ++ T Consensus 314 ~~G~~~~G~--~iD~~~g~dwl~~~iq~~l~~ll~~~~KIpyt~~Gi~~I~~~i~~~L~~~v~~~g~~~~~y~v~~P~~~ 391 (426) T protein:vir:31 314 TAGADSDTS--FFDIRRTKVYTAEMLELDLESLQVSDDDVPFTEDGQAMIEDAIKGTMSGLTGSVGQPLAEYEVDVPEWD 391 (426) T ss_pred ecccccchh--hhhhHHHHHHHHHHHHHHHHHHhhcCCCCccchhHHHHHHHHHHHHHHHHhcCCCccccceeecCCCcc Confidence 866555545 5668999999999999988766653 3 33456677899999999998888643 33442 23 Q ss_pred ccEEecCCCEE--EEEEEEEEccceeEEEEEEEEEe Q lcl|Aclame:pro 531 EVQVVLEGDVA--SISMTVMPIRSLNKITVQLVYKQ 564 (569) Q Consensus 531 d~~v~~~~d~~--~v~~~v~pv~~~e~I~~ti~v~~ 564 (569) +++.++.+ |. -+.+.++..-++.++.+..+|+- T Consensus 392 ~~~~dra~-R~~~~i~~~~~laGAIh~v~I~g~v~v 426 (426) T protein:vir:31 392 DDDVDRVN-RNWGGIDLDARLAQRAHTFSLGLNVSV 426 (426) T ss_pred ccchhhhh-hccCCceEEEEEeCcEEEEEEEEEEeC Confidence 43333222 33 38889999999999999988887 Done!