Query lcl|Aclame:protein:vir:80984|NCBI_annot:gp18 tail sheath protein|genbank:acc:YP_001469499;genbank:gi:157311456;genbank:GeneID:5602117 Match_columns 666 No_of_seqs 213 out of 903 Neff 9.7 Searched_HMMs 1612 Date Tue Dec 3 04:07:50 2013 Command /home/guerois/workspace/virfam/python/lib/hhsearch//hhsearch2 -i .//seq/seq_8 -d /home/guerois/workspace/virfam/python/profile_database/capsid_neck_tail.hhm -glob -cpu 7 -o .//seq/HHR/seq_8_vs_rec_db.hhr No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM 1 protein:vir:80984 Length: 666 100.0 3E-171 2E-174 955.8 56.9 666 1-666 1-666 (666) 2 protein:vir:6594 Length: 666 # 100.0 3E-170 2E-173 949.7 58.2 666 1-666 1-666 (666) 3 protein:vir:101804 Length: 663 100.0 1E-162 9E-166 907.8 57.6 657 1-666 1-663 (663) 4 protein:vir:101187 Length: 663 100.0 8E-162 5E-165 903.9 57.8 658 1-666 1-663 (663) 5 protein:vir:6894 Length: 660 # 100.0 3E-161 2E-164 900.7 57.7 657 1-665 1-660 (660) 6 protein:vir:108052 Length: 660 100.0 3E-161 2E-164 900.5 57.4 653 1-664 1-660 (660) 7 protein:vir:100539 Length: 663 100.0 2E-159 1E-162 890.3 56.7 658 1-666 1-663 (663) 8 protein:vir:106427 Length: 679 100.0 4E-159 2E-162 889.3 56.2 656 1-665 1-679 (679) 9 protein:vir:103456 Length: 659 100.0 2E-157 1E-160 880.0 56.0 656 1-664 1-659 (659) 10 protein:vir:98263 Length: 664 100.0 2E-157 1E-160 879.6 55.8 654 1-665 1-664 (664) 11 protein:vir:7206 Length: 659 # 100.0 3E-156 2E-159 872.9 56.9 656 1-664 1-659 (659) 12 protein:vir:5663 Length: 671 # 100.0 4E-146 3E-149 817.5 51.7 641 1-661 1-671 (671) 13 protein:vir:104477 Length: 749 100.0 4E-141 2E-144 790.5 55.7 641 1-661 1-749 (749) 14 protein:vir:106984 Length: 743 100.0 2E-140 1E-143 786.8 53.2 632 1-662 1-743 (743) 15 protein:vir:104858 Length: 729 100.0 2E-138 1E-141 775.2 51.8 644 1-663 3-729 (729) 16 protein:vir:79092 Length: 477 100.0 4E-107 2E-110 604.1 41.4 465 1-663 1-477 (477) 17 protein:vir:107865 Length: 477 100.0 8E-107 5E-110 602.2 42.2 465 1-663 1-477 (477) 18 protein:vir:98824 Length: 774 100.0 4E-103 3E-106 581.8 38.8 471 1-658 281-774 (774) 19 protein:vir:103168 Length: 641 100.0 1.4E-96 9E-100 546.1 37.2 528 1-553 3-641 (641) 20 protein:vir:6079 Length: 396 # 100.0 1.8E-94 1.1E-97 534.5 39.6 387 1-666 1-396 (396) 21 protein:vir:103993 Length: 390 100.0 1.7E-94 1E-97 534.7 37.2 380 1-665 2-390 (390) 22 protein:vir:78206 Length: 390 100.0 1.7E-94 1E-97 534.7 37.2 380 1-665 2-390 (390) 23 protein:vir:5711 Length: 396 # 100.0 5.9E-94 3.6E-97 531.7 40.2 387 1-666 1-396 (396) 24 protein:vir:79141 Length: 391 100.0 1.4E-94 8.4E-98 535.2 36.5 381 1-666 2-391 (391) 25 protein:vir:79181 Length: 390 100.0 2.1E-94 1.3E-97 534.2 37.4 380 1-665 2-390 (390) 26 protein:vir:98553 Length: 395 100.0 1.5E-93 9.2E-97 529.5 38.4 381 1-665 1-395 (395) 27 protein:vir:2035 Length: 396 # 100.0 1.7E-93 1E-96 529.2 37.5 387 1-666 1-396 (396) 28 protein:vir:1172 Length: 391 # 100.0 1.1E-93 6.8E-97 530.2 36.1 380 1-665 3-391 (391) 29 protein:vir:1845 Length: 392 # 100.0 7.9E-93 4.9E-96 525.5 37.6 381 1-665 1-392 (392) 30 protein:vir:100323 Length: 393 100.0 7.6E-93 4.7E-96 525.6 37.3 379 1-666 4-393 (393) 31 protein:vir:96740 Length: 388 100.0 1.8E-90 1.1E-93 512.5 37.4 376 1-664 4-388 (388) 32 protein:vir:10336 Length: 386 100.0 2.3E-88 1.4E-91 501.1 35.6 376 1-660 1-386 (386) 33 protein:vir:5833 Length: 742 # 100.0 4.5E-79 2.8E-82 450.1 45.7 586 5-657 1-742 (742) 34 protein:vir:79798 Length: 717 100.0 4.8E-65 3E-68 373.2 39.3 624 1-651 1-717 (717) 35 protein:vir:63742 Length: 562 100.0 1.1E-64 7E-68 371.2 36.8 539 1-656 9-562 (562) 36 protein:vir:80488 Length: 562 100.0 2.9E-63 1.8E-66 363.5 38.9 539 1-656 9-562 (562) 37 protein:vir:95741 Length: 587 100.0 5.9E-62 3.6E-65 356.3 35.9 565 1-656 9-587 (587) 38 protein:vir:102819 Length: 648 100.0 5.5E-62 3.4E-65 356.4 34.7 584 1-655 1-648 (648) 39 protein:vir:80779 Length: 569 100.0 2.9E-60 1.8E-63 347.0 39.6 542 1-656 1-569 (569) 40 protein:vir:99306 Length: 587 100.0 8.1E-60 5E-63 344.5 38.7 561 1-656 9-587 (587) 41 protein:vir:96586 Length: 587 100.0 1.4E-57 8.7E-61 332.3 38.5 561 1-656 9-587 (587) 42 protein:vir:102957 Length: 437 100.0 1.4E-51 8.7E-55 299.4 36.8 417 1-650 9-437 (437) 43 protein:vir:100829 Length: 607 100.0 3.6E-51 2.3E-54 297.1 33.7 554 1-662 18-607 (607) 44 protein:vir:101326 Length: 529 100.0 1.3E-45 8E-49 266.7 31.9 490 1-651 1-529 (529) 45 protein:vir:105470 Length: 451 100.0 4.5E-42 2.8E-45 247.2 37.3 425 1-650 9-451 (451) 46 protein:vir:7653 Length: 581 # 100.0 5.6E-36 3.4E-39 213.9 30.7 529 67-666 1-581 (581) 47 protein:vir:107310 Length: 581 100.0 3E-36 1.9E-39 215.3 27.1 535 40-666 1-581 (581) 48 protein:vir:78986 Length: 436 100.0 7.3E-29 4.6E-32 174.8 35.9 405 1-650 1-436 (436) 49 protein:vir:102359 Length: 356 99.3 1E-12 6.4E-16 86.3 21.7 317 251-649 1-356 (356) 50 protein:vir:4517 Length: 498 # 99.2 6E-11 3.7E-14 76.6 26.0 443 1-654 10-498 (498) 51 protein:vir:489 Length: 498 # 99.2 6.3E-11 3.9E-14 76.5 25.5 443 1-666 10-496 (498) 52 protein:vir:4463 Length: 498 # 99.2 1.1E-10 6.6E-14 75.2 25.3 443 1-666 10-496 (498) 53 protein:vir:276 Length: 369 # 99.0 2.1E-09 1.3E-12 68.1 23.4 345 274-654 1-369 (369) 54 protein:vir:3751 Length: 376 # 98.9 7.7E-09 4.7E-12 65.1 22.9 358 229-658 1-376 (376) 55 protein:vir:3788 Length: 376 # 98.9 8.8E-09 5.5E-12 64.7 23.0 358 229-658 1-376 (376) 56 protein:vir:95263 Length: 450 98.8 2.8E-08 1.8E-11 62.0 25.5 433 163-652 1-450 (450) 57 protein:vir:78782 Length: 370 98.8 4.2E-09 2.6E-12 66.5 20.0 349 229-654 1-370 (370) 58 protein:vir:1996 Length: 495 # 98.7 7.1E-08 4.4E-11 59.8 30.6 449 1-651 11-495 (495) 59 protein:vir:5260 Length: 502 # 98.4 9.1E-07 5.6E-10 53.7 34.0 463 1-651 1-502 (502) 60 protein:vir:80052 Length: 331 98.4 1.1E-06 6.6E-10 53.3 25.0 299 287-651 1-331 (331) 61 protein:vir:99586 Length: 507 96.3 0.00077 4.8E-07 37.7 25.7 457 1-650 1-507 (507) 62 protein:vir:3165 Length: 426 # 95.2 0.0024 1.5E-06 34.9 21.6 361 240-651 1-426 (426) 63 protein:vir:96104 Length: 504 93.4 0.0076 4.7E-06 32.2 26.4 453 1-650 1-504 (504) 64 protein:vir:101576 Length: 501 93.4 0.0077 4.8E-06 32.2 33.0 450 1-651 1-501 (501) 65 protein:vir:107720 Length: 515 93.0 0.0091 5.7E-06 31.8 27.5 463 1-650 1-515 (515) 66 protein:vir:106730 Length: 501 81.0 0.089 5.5E-05 26.3 34.9 450 1-651 1-501 (501) 67 protein:vir:3636 Length: 501 # 76.7 0.13 8.3E-05 25.4 36.1 447 1-651 1-501 (501) 68 protein:vir:78611 Length: 501 76.2 0.14 8.6E-05 25.3 34.9 453 1-651 1-501 (501) 69 protein:vir:94073 Length: 494 54.7 0.5 0.00031 22.2 32.4 445 1-651 1-494 (494) No 1 >protein:vir:80984 Length: 666 # NCBI annotation: gp18 tail sheath protein # Family: family:all:661 # MgeID: mge:1888 # MgeName: Phi1 # Cross-refs: genbank:acc:YP_001469499;genbank:gi:157311456;genbank:GeneID:5602117 Probab=100.00 E-value=2.6e-171 Score=955.79 Aligned_cols=666 Identities=100% Similarity=1.453 Sum_probs=578.1 Q ss_pred CceecCceEEEEecCCccccccCcCceEEEEeccCCCCCcCEEeCCHHHHHHHcCCcCCCchhHHHHHHHHHhCCCeEEE Q lcl|Aclame:pro 1 MTLLSPGFETKETTLSTTIVQSATGRAALVGKFQWGPAFQIIQVTNEVELVNKFGQPDNNTADYFMSGANFLQYGNDLRV 80 (666) Q Consensus 1 ~~~~~PGVyvee~~~~~~i~~v~tsv~~fvG~~~~Gpv~~p~~i~s~~~~~~~fG~~~~~~~~~~~~~~~f~ngg~~~~v 80 (666) |+|++|||||||+|++++|.+|+||++||||+|+|||+|+|++|+||.||++.||++.+.+|++|++++||+|||++||| T Consensus 1 ~~~~~Pgvyv~e~~~~~~~~~~~t~~~~~vg~~~~gp~~~p~~i~~~~~~~~~fg~~~~~~~~~~~~~~~f~~~g~~~~v 80 (666) T protein:vir:80 1 MTLLSPGFETKETTLSTTIVQSATGRAALVGKFQWGPAFQIIQVTNEVELVNKFGQPDNNTADYFMSGANFLQYGNDLRV 80 (666) T ss_pred CceecCceEEEEecCCccccccCcccceEEeccccCCCccceEecCHHHHHHhcCCccCccchHHHHHHHHhcCCCeEEE Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred EEcccCcccccccccccccceeeecccccccccccceeeeccccccccccccccccccceeEEeecccccccccccccee Q lcl|Aclame:pro 81 VRVLNKEKAKNATALAGNIEFEITNEGSNYEVGDTIKIKHNRQDIETAGKVTKVDGDGKVKGVFIPTGKIIAHAKAIGVY 160 (666) Q Consensus 81 vRv~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~a~~~~~~ 160 (666) |||.+.+..+++....+.+..+...++....+++.+.+..................+.........+...+..+...... T Consensus 81 ~R~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~ta~~~~~a~~~~~~ 160 (666) T protein:vir:80 81 VRVLNKEKAKNATALAGNIEFEITNEGSNYEVGDTIKIKHNRQDIETAGKVTKVDGDGKVKGVFIPTGKIIAHAKAIGVY 160 (666) T ss_pred EEecCccccccccccccceeEEEeeccccccccccccccccCcccccCcceEEEeecceeeeeecchhhhcccccccccc Confidence 99999888888887777777777778777667776666655544444444444444444444444444444444444444 Q ss_pred eecccceeEEEeecccccceeeeeeeeeccceeeeeeccchhhccccceeeeeecccceeeeeeccccccccceeeeeec Q lcl|Aclame:pro 161 PELDGDWTAEFTSSSGNGSAALSVTKIVTDSGLLLTDLETSRANITNQTFLTKLQKYDMPAVSAIYAGEIGNSLEVEILA 240 (666) Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~A~~~g~~gn~i~v~v~~ 240 (666) ..+.......+.........+..+...+.+++........+................+.+...+..++.|++.+++.+.. T Consensus 161 ~~v~~~~~~~~~~~~~~~~~a~~V~~~~~~~~~~~~~~~~a~~~~t~~~~~~~~~~~~~~a~~a~~~g~~g~~l~v~i~~ 240 (666) T protein:vir:80 161 PELDGDWTAEFTSSSGNGSAALSVTKIVTDSGLLLTDLETSRANITNQTFLTKLQKYDMPAVSAIYAGEIGNSLEVEILA 240 (666) T ss_pred ceeeccceeeeccccccceeeeeeeeeecCCccceeeeccccccccccccccccccccchhhhhhcccccccceeeeecc Confidence 44555556666666666666667777777666655554444444444444444445556667788899999999988877 Q ss_pred cccccccccccccccccccccceeeeeeccCcCcccceeeecccccccceeeecccccccccccchhhhHhHhcccCceE Q lcl|Aclame:pro 241 RSAFKNTAPDLTMYPYGGERTAARNLIPYAPQNDNQYAFIVRRDGVVVESYVLSTLKGDKDVYGNSIYMDDFFGRGSSQY 320 (666) Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~et~~ls~~~~~~~~~~~~~~~~~~~~~~~s~~ 320 (666) ..........+.........................+.+++...|.++|++.++...+.+...+...++.+.+++..+.+ T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (666) T protein:vir:80 241 RSAFKNTAPDLTMYPYGGERTAARNLIPYAPQNDNQYAFIVRRDGVVVESYVLSTLKGDKDVYGNSIYMDDFFGRGSSQY 320 (666) T ss_pred ccccccccccceeeeccccccccceeeeeccccccceeeEeccCCccceeeecccccccccccchhhhhhhhhcccccee Confidence 66666665666555555444445556666666777788899999999999999998888888888888999988888888 Q ss_pred EEEeccccccccceeeeecCcccccccccccccccccccchhhhhhhhhcchhhcCccEEecccCCCchhHHHHHHHHHH Q lcl|Aclame:pro 321 IYATAQGWVDGFSGIISLAGGVSANEATTGGVGADPFIGAMMQGWGLFAERESIHVNLLIAGACAGEGDAFSTVQKHAVS 400 (666) Q Consensus 321 i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ll~~p~~~~~~~~~~~v~~~~~~ 400 (666) +...............++.++.+......+..+..+..++..++++++++.+.+++++|++|+++.+.++...++.++++ T Consensus 321 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~p~~~~~~~~~~~v~~~~~~ 400 (666) T protein:vir:80 321 IYATAQGWVDGFSGIISLAGGVSANEATTGGVGADPFIGAMMQGWGLFAERESIHVNLLIAGACAGEGDAFSTVQKHAVS 400 (666) T ss_pred eeecccccccccceEEEecCCCCcccccccccccccccccchhhhhhhhhhcccccceEeecCcCCcccchHHHHHHHHH Confidence 88888888888888889999998888888888888899999999999999999999999999999988888999999999 Q ss_pred HhhccccEEEEEcCCccccccccccCCHHHHHHHHhhccccchhhcccCcceEEEEcCeEEEecCcCCceeEechHHHHH Q lcl|Aclame:pro 401 IGDERQDCLVMVSPPRSTVVNIPVTTAIDNLIAWREGSGNYNENNMNINTTYAVIDGNYKYQYDKYNDVNRWVPLAADIA 480 (666) Q Consensus 401 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~p~~~~~d~~~~~~~~~p~s~~~a 480 (666) ||+++++||+++|+|+..+++.++.++++++++||+..+.....+.+++|+|+++||||++++|+.+++.+++|||+++| T Consensus 401 ~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~p~~~~~d~~~~~~~~~p~sg~~A 480 (666) T protein:vir:80 401 IGDERQDCLVMVSPPRSTVVNIPVTTAIDNLIAWREGSGNYNENNMNINTTYAVIDGNYKYQYDKYNDVNRWVPLAADIA 480 (666) T ss_pred HHHhhcceEEEeecceeEEeecCCCCCHHHHHHHHHhcccchhhhcccCcceEEEEcCceEEecccCCceeEechHHHHH Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred HHHHhhhhcCCceecccceecceeeeeeeeeecCChhHHhhhhhccceEEEEecCCeEEEEcceecCCCccccceeehhh Q lcl|Aclame:pro 481 GLCARTDAVSQPWMSPAGYNRGQIMNVVKLAIEPRKAHRDRLYQAAINPVIGAGGEGFILMGDKTATTVPSPFDRINVRR 560 (666) Q Consensus 481 g~~a~~d~~~g~~~span~~~~~i~g~~~~~~~~~~~~~~~Ln~~gIn~i~~~~g~G~~~wG~rT~~~~~~~~~~i~vrR 560 (666) |+|||+|.++||||||||+++++|.|+.++++.+++.|++.||++|||||++|+++|+++||+||+++++++|+|||||| T Consensus 481 Gl~Ar~D~~~g~~~sPan~~~~~i~g~~~~~~~~~~~~~~~Ln~~gIn~i~~~~g~G~~~wG~rT~~~~~s~~~~i~vRR 560 (666) T protein:vir:80 481 GLCARTDAVSQPWMSPAGYNRGQIMNVVKLAIEPRKAHRDRLYQAAINPVIGAGGEGFILMGDKTATTVPSPFDRINVRR 560 (666) T ss_pred HHHHHHhhcCCceEccCCeecceeeccccceeecChhHHHhhhhCCeeEEEEeCCCeEEEEccccCCCCCcccceeehhh Confidence 99999999999999999999999999999999999999999999999999999999999999999999889999999999 Q ss_pred HHHHHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHhcCCeeeeEEEEcccCCCHHHhhCCEEEEEEEEEecCCc Q lcl|Aclame:pro 561 LFNMLKKNIGDSSKYKLFENNDNFTRASFRMEVSQYLSTIRSLGGIYDFRVQCDTTNNTPDVIDRNEFVASMFIKPAKSI 640 (666) Q Consensus 561 ~~~~i~~~~~~~~~~~v~epn~~~~~~~i~~~i~~~l~~l~~~gal~g~~v~~d~~~n~~~~i~~G~~~~~i~~~p~~p~ 640 (666) ||+||+++|++.++|+||||||+.||++|+++|+.||++||++|+|+||+|+||+++||++||++|+|+|+|+++|++|| T Consensus 561 l~~~i~~si~~~~~~~v~epn~~~l~~~i~~~i~~~L~~l~~~gal~g~~V~~d~~~nt~~di~~G~~~~~i~~~P~~Pa 640 (666) T protein:vir:80 561 LFNMLKKNIGDSSKYKLFENNDNFTRASFRMEVSQYLSTIRSLGGIYDFRVQCDTTNNTPDVIDRNEFVASMFIKPAKSI 640 (666) T ss_pred HHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhcCceeeeEEEEcCCCCCHHHhhCCeEEEEEEEEecCCc Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred cEEEEEEEEeecchhHHHHHHHHhcC Q lcl|Aclame:pro 641 NYIMLNFTAVATGSDFDEIIGPVNQA 666 (666) Q Consensus 641 e~i~~~~~~~~~~~~~~e~~~~~~~~ 666 (666) |||+|||+|++++++|+|++++|||| T Consensus 641 e~I~~~~~~~~~~~~~~e~~~~~~~~ 666 (666) T protein:vir:80 641 NYIMLNFTAVATGSDFDEIIGPVNQA 666 (666) T ss_pred ceEEEEEEEeecCccHHHHHHHHhcC Confidence 99999999999999999999999999 No 2 >protein:vir:6594 Length: 666 # NCBI annotation: tail sheath protein # Family: family:all:661 # MgeID: mge:139 # MgeName: RB49 # Cross-refs: genbank:acc:NP_891725;genbank:gi:33620670;genbank:GeneID:1725344 Probab=100.00 E-value=3.4e-170 Score=949.66 Aligned_cols=666 Identities=99% Similarity=1.441 Sum_probs=578.3 Q ss_pred CceecCceEEEEecCCccccccCcCceEEEEeccCCCCCcCEEeCCHHHHHHHcCCcCCCchhHHHHHHHHHhCCCeEEE Q lcl|Aclame:pro 1 MTLLSPGFETKETTLSTTIVQSATGRAALVGKFQWGPAFQIIQVTNEVELVNKFGQPDNNTADYFMSGANFLQYGNDLRV 80 (666) Q Consensus 1 ~~~~~PGVyvee~~~~~~i~~v~tsv~~fvG~~~~Gpv~~p~~i~s~~~~~~~fG~~~~~~~~~~~~~~~f~ngg~~~~v 80 (666) |+|+||||||||+|++++|+||+||++||||+|+|||+|+|++|+||.||+++||++.+.+|++|++++||+|||++||| T Consensus 1 ~~~~~PgVyv~e~~~~~~i~~v~ts~~~fvG~~~~Gp~~~p~~v~s~~~~~~~fG~~~~~~~~~~~~~~~f~ngg~~~~v 80 (666) T protein:vir:65 1 MTLLSPGFETKETTLSTTIVQSETGRAALVGKFQWGPAFQIIQVTNEVELVNKFGQPDNNTADYFMSGANFLQYGNDLRV 80 (666) T ss_pred CceecCceEEEEecCcccccccCcccceEEecccCCCCccCEEecCHHHHHHHcCCccccchhHHHHHHHHHhcCceEEE Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred EEcccCcccccccccccccceeeecccccccccccceeeeccccccccccccccccccceeEEeecccccccccccccee Q lcl|Aclame:pro 81 VRVLNKEKAKNATALAGNIEFEITNEGSNYEVGDTIKIKHNRQDIETAGKVTKVDGDGKVKGVFIPTGKIIAHAKAIGVY 160 (666) Q Consensus 81 vRv~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~a~~~~~~ 160 (666) ||+.+.+..+++....++...+...++....+++.+.++.+.........+.....++.......++...+......+.. T Consensus 81 vrv~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~V~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~~~~~~~~g~~ 160 (666) T protein:vir:65 81 VRVLNKEKAKNATALAGNVEFEITNEGSNYEVGDTIKIKHNRQDIETAGKVTKVDGDGKVKGVFIPTGKIIAHAKAIGVY 160 (666) T ss_pred EEccCcccccccccccCceeeeEeeccccccccceEEEEecccccccccccccccccccccccccccceeeccccccCcc Confidence 99999888888887777778888888888888888888777665555444444444444444444444444444444444 Q ss_pred eecccceeEEEeecccccceeeeeeeeeccceeeeeeccchhhccccceeeeeecccceeeeeeccccccccceeeeeec Q lcl|Aclame:pro 161 PELDGDWTAEFTSSSGNGSAALSVTKIVTDSGLLLTDLETSRANITNQTFLTKLQKYDMPAVSAIYAGEIGNSLEVEILA 240 (666) Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~A~~~g~~gn~i~v~v~~ 240 (666) ..+..+...++...+.....+..+...+.+++........+......................+..++.|++.+++++.. T Consensus 161 ~~l~~~~~~~~~~~~~~~~~a~sv~~~~~~g~~~~~~~~~a~~~~~~~~~~~~~~~~~~~a~~A~~~g~~g~~i~v~i~~ 240 (666) T protein:vir:65 161 PELDGGWTAEFTSSSGNGSAALSVTKIVTDSGLLLTDLETSRANITNQTFLTKLKKYDMPAVSAIYAGEIGNSLEVEILA 240 (666) T ss_pred eeEeeccceeecccCcccccceeeeecccccceeeeeecccccccccccccccccccccceeeeeeccccccceeEEeec Confidence 44444444555555555555566666666666665555555544444444444445556677888999999999998877 Q ss_pred cccccccccccccccccccccceeeeeeccCcCcccceeeecccccccceeeecccccccccccchhhhHhHhcccCceE Q lcl|Aclame:pro 241 RSAFKNTAPDLTMYPYGGERTAARNLIPYAPQNDNQYAFIVRRDGVVVESYVLSTLKGDKDVYGNSIYMDDFFGRGSSQY 320 (666) Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~et~~ls~~~~~~~~~~~~~~~~~~~~~~~s~~ 320 (666) ..........+...............+.........+.+++...|...|+|.++...+.+.......++.+.+.+..+.+ T Consensus 241 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (666) T protein:vir:65 241 RSAFKNTAPDLTMYPYGGERTAARNLIPYAPQNDNQYAFIVRRDGVVVESYVLSTLKGDKDVYGNSIYMDDFFARGSSQY 320 (666) T ss_pred ccccccccccccccccccccccceeeecccccccccceeeeecCCcccceeecccCcccccccchhhhhhhhhcccccce Confidence 77766666666666666666666666667777778889999999999999999988888888888888888888888888 Q ss_pred EEEeccccccccceeeeecCcccccccccccccccccccchhhhhhhhhcchhhcCccEEecccCCCchhHHHHHHHHHH Q lcl|Aclame:pro 321 IYATAQGWVDGFSGIISLAGGVSANEATTGGVGADPFIGAMMQGWGLFAERESIHVNLLIAGACAGEGDAFSTVQKHAVS 400 (666) Q Consensus 321 i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ll~~p~~~~~~~~~~~v~~~~~~ 400 (666) +...............++.++.+......+.++..+..++...+++++...+...+++|++|+++..+++...|+.+|++ T Consensus 321 v~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~p~~~~~~~~~~~v~~~l~~ 400 (666) T protein:vir:65 321 IYATAQGWVDGFSGIISLAGGVSANEATTGGVGADPFIGAMMQGWDLFAERESIHVNLLIAGACAGEGDAFSTVQKHAVS 400 (666) T ss_pred eeeecccccccccceEEccCCCCcCcccccccccccccccHHHHHHHHhhhhhccCCceeecCcCCccchhHHHHHHHHH Confidence 88877776667777788999998888877778888888888888888888887889999999999988889999999999 Q ss_pred HhhccccEEEEEcCCccccccccccCCHHHHHHHHhhccccchhhcccCcceEEEEcCeEEEecCcCCceeEechHHHHH Q lcl|Aclame:pro 401 IGDERQDCLVMVSPPRSTVVNIPVTTAIDNLIAWREGSGNYNENNMNINTTYAVIDGNYKYQYDKYNDVNRWVPLAADIA 480 (666) Q Consensus 401 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~p~~~~~d~~~~~~~~~p~s~~~a 480 (666) ||+++++||+++|+|+..+++.++.++++++++||+.++.....+.+++|+|+++||||++++|+.++..+++|||+++| T Consensus 401 ~~~~~~~~~a~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~p~~~~~d~~~~~~~~~p~sg~vA 480 (666) T protein:vir:65 401 IGDERQDCLVMVSPPRSTVVNIPVTTAIDNLIAWREGSGNYNENNMNINTTYAVIDGNYKYQYDKYNDVNRWVPLAADIA 480 (666) T ss_pred HHhhccceEEEeccccceeeecCCCCCHHHHHHHHHhcccccccccccCcceEEEEcCceEEecccCCceeEechHHHHH Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred HHHHhhhhcCCceecccceecceeeeeeeeeecCChhHHhhhhhccceEEEEecCCeEEEEcceecCCCccccceeehhh Q lcl|Aclame:pro 481 GLCARTDAVSQPWMSPAGYNRGQIMNVVKLAIEPRKAHRDRLYQAAINPVIGAGGEGFILMGDKTATTVPSPFDRINVRR 560 (666) Q Consensus 481 g~~a~~d~~~g~~~span~~~~~i~g~~~~~~~~~~~~~~~Ln~~gIn~i~~~~g~G~~~wG~rT~~~~~~~~~~i~vrR 560 (666) |+|||+|.++||||||+|+++.+|.|+.++++.+++.|++.||++|||||++|+++|+++||+||+++++++|+|||||| T Consensus 481 Gl~Ar~D~~~g~~~span~~~~~i~g~~~~~~~~~~~~~~~Ln~~gIn~i~~~~~~G~~~wG~rT~~~~~s~~~~i~vrR 560 (666) T protein:vir:65 481 GLCARTDAVSQPWMSPAGYNRGQIMNVVKLAIEPRKAHRDRLYQAAINPVIGAGGEGFILMGDKTATTVPSPFDRINVRR 560 (666) T ss_pred HHHHHHhccCCcEEccCCeecceeeccccceeecChhHHHhhhhCCceEEEEeCCCeEEEEecccCCCCCcccceEehhh Confidence 99999999999999999999999999999999999999999999999999999999999999999998888999999999 Q ss_pred HHHHHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHhcCCeeeeEEEEcccCCCHHHhhCCEEEEEEEEEecCCc Q lcl|Aclame:pro 561 LFNMLKKNIGDSSKYKLFENNDNFTRASFRMEVSQYLSTIRSLGGIYDFRVQCDTTNNTPDVIDRNEFVASMFIKPAKSI 640 (666) Q Consensus 561 ~~~~i~~~~~~~~~~~v~epn~~~~~~~i~~~i~~~l~~l~~~gal~g~~v~~d~~~n~~~~i~~G~~~~~i~~~p~~p~ 640 (666) ||+||+++|++.++|+||||||+.||++|+++|+.||++||++|+|+||+|+||+++||+++|++|+|+|+|+++|++|+ T Consensus 561 ~~~~i~~si~~~~~~~v~epn~~~l~~~i~~~i~~~L~~l~~~gal~g~~V~~d~~~nt~~~i~~G~~~~~i~~~p~~pa 640 (666) T protein:vir:65 561 LFNMLKKNIGDSSKYKLFENNDNFTRASFRMEVSQYLSTIRSLGGIYDFRVQCDTTNNTPDVIDRNEFVASMFIKPAKSI 640 (666) T ss_pred HHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeEEEEcCCCCCHHHhhCCeEEEEEEEEecCCc Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred cEEEEEEEEeecchhHHHHHHHHhcC Q lcl|Aclame:pro 641 NYIMLNFTAVATGSDFDEIIGPVNQA 666 (666) Q Consensus 641 e~i~~~~~~~~~~~~~~e~~~~~~~~ 666 (666) |||+|||+|++++++|+|++++|||| T Consensus 641 e~i~~~~~~~~~~~~~~e~~~~~~~~ 666 (666) T protein:vir:65 641 NYIMLNFTAVATGSDFDEIIGPANQA 666 (666) T ss_pred ceEEEEEEEeecCccHHHHHHHHhcC Confidence 99999999999999999999999999 No 3 >protein:vir:101804 Length: 663 # NCBI annotation: gp18 # Family: family:all:661 # MgeID: mge:1580 # MgeName: 31 # Cross-refs: genbank:acc:YP_238881;genbank:gi:66391956;genbank:GeneID:3416631 Probab=100.00 E-value=1.5e-162 Score=907.83 Aligned_cols=657 Identities=60% Similarity=1.044 Sum_probs=552.7 Q ss_pred CceecCceEEEEecCCccccccCcCceEEEEeccCCCCCcCEEeCCHHHHHHHcCCcCCCchhHHHHHHHHHhCCCeEEE Q lcl|Aclame:pro 1 MTLLSPGFETKETTLSTTIVQSATGRAALVGKFQWGPAFQIIQVTNEVELVNKFGQPDNNTADYFMSGANFLQYGNDLRV 80 (666) Q Consensus 1 ~~~~~PGVyvee~~~~~~i~~v~tsv~~fvG~~~~Gpv~~p~~i~s~~~~~~~fG~~~~~~~~~~~~~~~f~ngg~~~~v 80 (666) |+|++|||||||+|++++|+||+||++||||+|+|||+|+|++|+||.||++.||+|.+.+|++|++++||+|||++||| T Consensus 1 ~~~~~Pgvyv~e~~~~~~i~~~~t~~~~~vG~~~~Gp~~~p~~v~~~~~~~~~fg~~~~~~~~~~~~~~~f~ngg~~~~v 80 (663) T protein:vir:10 1 MALLSPGIEMKETSINSTVVRSATGRAAIVGKFAWGPAYEVRQVTNEVELVDMFGSPDNVTAPYFMSAMNFLQYGNDLRL 80 (663) T ss_pred CceecCceEEEEecCCccccccCcccceeEeecccCCCCccEEecCHHHHHHhcCCcCCcchhHHHHHHHHHhCCCeEEE Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred EEcccCcccccccccccccceeeecccccccccccceeeeccccccccccccccccccceeEEeecccccccccccccee Q lcl|Aclame:pro 81 VRVLNKEKAKNATALAGNIEFEITNEGSNYEVGDTIKIKHNRQDIETAGKVTKVDGDGKVKGVFIPTGKIIAHAKAIGVY 160 (666) Q Consensus 81 vRv~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~a~~~~~~ 160 (666) ||+.+++..+++....+....+....+....+++.+.++..........+++..+++.........+......+...... T Consensus 81 vRv~~~~~~~~a~~~~~~~~~~~~~~~~~~~~g~~i~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~ta~~~~~~~~v~~~ 160 (663) T protein:vir:10 81 VRVIDMEKAKNASPLVNQVSVTITTEGQGYTVGDAITVKYNNATITEAGKVTAVDSDGKIKSLFVPTAEIIAKTRQLGTY 160 (663) T ss_pred EEccCCccccccccccccceeEEeecccccccccccccccccccccccccceeeecccceEEEeeccccccccccccccc Confidence 99999888887776666777777778777888888888888777777788888888877777777666655555556666 Q ss_pred eecccceeEEEeecccccceeeeeeeeeccceeeeeeccchhhccccceeeeeecccceeeeeeccccccccceeeeeec Q lcl|Aclame:pro 161 PELDGDWTAEFTSSSGNGSAALSVTKIVTDSGLLLTDLETSRANITNQTFLTKLQKYDMPAVSAIYAGEIGNSLEVEILA 240 (666) Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~A~~~g~~gn~i~v~v~~ 240 (666) +.........+...+.....+..+...+.+.+..+..........+.............+.+.+..+|.||+.+++.+.. T Consensus 161 ~~~~~~~~~~~s~~s~~~~~a~~v~~v~~d~~~~v~~~~~a~~~~t~~~~~~~~~~~~~~~i~A~~~G~~Gn~i~V~i~~ 240 (663) T protein:vir:10 161 PTLGDNWRIDVSGASGGSAAALALGNIVVDSGVTFGNSEDAPAVMTSPAVMEKYAKFGMPLISAVYPGEIGSTVEVEIVS 240 (663) T ss_pred eeeccceeeEeeeccCccccccccceeccccceEEeeccccccccccccccccccccccceEEeccCCcccceeeeeecc Confidence 66666666667666666666666777777777777666666555555555555555666778899999999999998865 Q ss_pred cccccccccccccccc-cccccceeeeeeccCcCcccceeeecccccccceeeecccccccccccchhhhHhHhcccCce Q lcl|Aclame:pro 241 RSAFKNTAPDLTMYPY-GGERTAARNLIPYAPQNDNQYAFIVRRDGVVVESYVLSTLKGDKDVYGNSIYMDDFFGRGSSQ 319 (666) Q Consensus 241 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~et~~ls~~~~~~~~~~~~~~~~~~~~~~~s~ 319 (666) ........ .+..... ..................+.+.+.+..++...+.+.++...+.....+...++.+.+.+..+. T Consensus 241 ~~~~~~~~-~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (663) T protein:vir:10 241 KTAFNSGA-QQTIYPFGGTRTSNARGVIQYGPMTDDQFAIIVRRDGIVVESTVLSTRKGDRDVYGSNIFMDDYFRNGGSN 319 (663) T ss_pred cccccccc-ccceecccccccccccceeecccccccceeeEeecCCcceeeecccccccccccccchhhhhhhhcCCcce Confidence 54333222 2222222 222333344444555667778888888888889898988888888888888888888888888 Q ss_pred EEEEeccccccccceeeeecCcccccccccccccccccccchhhhhhhhhcchhhcCccEEecccCCC-chhHHHHHHHH Q lcl|Aclame:pro 320 YIYATAQGWVDGFSGIISLAGGVSANEATTGGVGADPFIGAMMQGWGLFAERESIHVNLLIAGACAGE-GDAFSTVQKHA 398 (666) Q Consensus 320 ~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ll~~p~~~~~-~~~~~~v~~~~ 398 (666) ++.+.............++.+|.+.....+ .+++.+.+..+...+...++++++|..... .+....++.+| T Consensus 320 ~~~~~~~~~~~~~~~~~~l~gg~d~~~~~~--------~~~~~~~~~~l~~~~~~~~~~~i~~~~~~~~~~~~~~v~~~l 391 (663) T protein:vir:10 320 FIFASSEGWPAGFTGIIQLGGGTSANADVG--------ADELIKGWDLFSDREALHVNLMIAGACGSDGAEIASTVQKYV 391 (663) T ss_pred EEEEeecccCccccceeEeccccCCccccc--------hhhhHHHHHhhhcccccceeEEEeccCCCCchhhHHHHHHHH Confidence 887777776666677788888877543322 233444444455556667888888765443 34567899999 Q ss_pred HHHhhccccEEEEEcCCccccccccccCCHHHHHHHHhhcc---ccchhhcccCcceEEEEcCeEEEecCcCCceeEech Q lcl|Aclame:pro 399 VSIGDERQDCLVMVSPPRSTVVNIPVTTAIDNLIAWREGSG---NYNENNMNINTTYAVIDGNYKYQYDKYNDVNRWVPL 475 (666) Q Consensus 399 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~s~~~~~~~p~~~~~d~~~~~~~~~p~ 475 (666) ++||+++++||+++|+|+.........++.+++++|++... .......+++|+|+++||||++++|+.+++.+++|| T Consensus 392 ~~~a~~~~~~~ai~d~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~p~~~~~d~~~~~~~~~p~ 471 (663) T protein:vir:10 392 VSLADDRQDCVAIVNPPAELMVGIPTSTAVKNIVEWRNGMTGSGEVVDNNMNISSTYAFIIGNYKYQYDKYNDINRWVPL 471 (663) T ss_pred HHHHHhhCCEEEEEecCcccccccccccchHHHHHHHHhccccccchhhhcccCccceEEEcCceEEecccCCceEEech Confidence 99999999999999999988888888899999999998754 233445678999999999999999999999999999 Q ss_pred HHHHHHHHHhhhhcCCceecccceecceeeeeeeeeecCChhHHhhhhhccceEEEEecC-CeEEEEcceecCCCccccc Q lcl|Aclame:pro 476 AADIAGLCARTDAVSQPWMSPAGYNRGQIMNVVKLAIEPRKAHRDRLYQAAINPVIGAGG-EGFILMGDKTATTVPSPFD 554 (666) Q Consensus 476 s~~~ag~~a~~d~~~g~~~span~~~~~i~g~~~~~~~~~~~~~~~Ln~~gIn~i~~~~g-~G~~~wG~rT~~~~~~~~~ 554 (666) |+++||+|||+|.++||||||||+++++|.|++++++.+++.|++.||++|||||++|++ +||++||+||+++++++|+ T Consensus 472 sg~vAGl~Ar~D~~~g~~~sPan~~~~~i~g~~~~~~~~~~~e~~~Ln~~gin~i~~~~~~~G~~~wG~rT~~~~~s~~~ 551 (663) T protein:vir:10 472 AADIAGLCAYTDQVSHPWMSPAGYRRGQIRNCIKLAIEPKQSMRDTMYQVAINPVTGFAGGDGFVLFGDKMATQVPSPFD 551 (663) T ss_pred hHHHHHHHHHhhccCCceEccCCceeccccccccceeecChhHHHHHhhCCceEEEEEeCCCcEEEEcccccCCCCcccc Confidence 999999999999999999999999999999999999999999999999999999999997 7999999999999889999 Q ss_pred eeehhhHHHHHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHhcCCeeeeEEEEcccCCCHHHhhCCEEEEEEEE Q lcl|Aclame:pro 555 RINVRRLFNMLKKNIGDSSKYKLFENNDNFTRASFRMEVSQYLSTIRSLGGIYDFRVQCDTTNNTPDVIDRNEFVASMFI 634 (666) Q Consensus 555 ~i~vrR~~~~i~~~~~~~~~~~v~epn~~~~~~~i~~~i~~~l~~l~~~gal~g~~v~~d~~~n~~~~i~~G~~~~~i~~ 634 (666) ||||||||+||+++|++.++|+||||||+.+|++|+++|+.||++||++|+|+||+|+||+++||+++|++|+|+|+|+| T Consensus 552 ~i~vrR~~~~i~~si~~~~~~~v~epn~~~l~~~i~~~i~~~L~~l~~~gal~g~~v~~d~~~nt~~~i~~G~~~~~i~~ 631 (663) T protein:vir:10 552 RINVRRLFNMLKKNIGDTSKYELFENNDAFTRQSFRMETSQYLDGIRSLGGCYDFRVVCDTTNNTPNVIDRNEFVGTIYV 631 (663) T ss_pred eEehhhHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeEEEEcCCCCCHHHhhCCeEEEEEEE Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred EecCCccEEEEEEEEeecchhHHHHHHHHhcC Q lcl|Aclame:pro 635 KPAKSINYIMLNFTAVATGSDFDEIIGPVNQA 666 (666) Q Consensus 635 ~p~~p~e~i~~~~~~~~~~~~~~e~~~~~~~~ 666 (666) +|.+|+|||+|||+|++++++|+|++++|+|| T Consensus 632 ~p~~pae~i~~~~~~~~~~~~~~e~~~~~~~~ 663 (663) T protein:vir:10 632 KPPRSINYITLNMVATSTGANFDELIGPMQLA 663 (663) T ss_pred EecCCcceEEEEEEEeecCccHHHHHHHHhcC Confidence 99999999999999999999999999999999 No 4 >protein:vir:101187 Length: 663 # NCBI annotation: tail sheath protein # Family: family:all:661 # MgeID: mge:1582 # MgeName: 44RR2.8t # Cross-refs: genbank:acc:NP_932509;genbank:gi:37651635;genbank:GeneID:2610680 Probab=100.00 E-value=7.6e-162 Score=903.89 Aligned_cols=658 Identities=60% Similarity=1.024 Sum_probs=542.2 Q ss_pred CceecCceEEEEecCCccccccCcCceEEEEeccCCCCCcCEEeCCHHHHHHHcCCcCCCchhHHHHHHHHHhCCCeEEE Q lcl|Aclame:pro 1 MTLLSPGFETKETTLSTTIVQSATGRAALVGKFQWGPAFQIIQVTNEVELVNKFGQPDNNTADYFMSGANFLQYGNDLRV 80 (666) Q Consensus 1 ~~~~~PGVyvee~~~~~~i~~v~tsv~~fvG~~~~Gpv~~p~~i~s~~~~~~~fG~~~~~~~~~~~~~~~f~ngg~~~~v 80 (666) |+|++|||||||+|++++|+||+||++||||+|+|||+|+|++|+||.||++.||++.+.+|++|++++||+|||++||| T Consensus 1 ~~~~~PgVyv~e~~~~~~i~~v~ts~~~fvG~~~~Gp~~~p~~i~s~~d~~~~fG~~~~~~~~~~~v~~~f~ngg~~~~v 80 (663) T protein:vir:10 1 MALLSPGIEMKETSINSTVVRSATGRAAIVGKFAWGPAYEVRQVTNEVELVDMFGSPDNVTAPYFMSAMNFLQYGNDLRL 80 (663) T ss_pred CceecCceEEEEecCcccccccCccceeEEeeeccCCCCccEEecCHHHHHHHhCCcCccchhHHHHHHHHHhCCCeEEE Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred EEcccCcccccccccccccceeeecccccccccccceeeeccccccccccccccccccceeEEeecccccccccccccee Q lcl|Aclame:pro 81 VRVLNKEKAKNATALAGNIEFEITNEGSNYEVGDTIKIKHNRQDIETAGKVTKVDGDGKVKGVFIPTGKIIAHAKAIGVY 160 (666) Q Consensus 81 vRv~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~a~~~~~~ 160 (666) ||+.+++..+++....+....+....+....+++.+.+...........+.+..+++........++............. T Consensus 81 vRv~~~~~~~~a~~~~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~~~~n~~~~~v~~~~a~~~~~~~~v~~~ 160 (663) T protein:vir:10 81 VRVIDMEKAKNASPLVNQVSVTITTEGQGYTVGDAITVKYNNATITEAGKVTAVDSDGKIKSLFVPTAEIIAKTRQLGTY 160 (663) T ss_pred EEccCCcccccccccCCcceeeeeccccCccccccccccccccccccccceeeeccCCceEEEEecccccccccccccee Confidence 99999888877776666777777777777888888888887777777778888888887766666655544444455555 Q ss_pred eecccceeEEEeecccccceeeeeeeeeccceeeeeeccchhhccccceeeeeecccceeeeeeccccccccceeeeeec Q lcl|Aclame:pro 161 PELDGDWTAEFTSSSGNGSAALSVTKIVTDSGLLLTDLETSRANITNQTFLTKLQKYDMPAVSAIYAGEIGNSLEVEILA 240 (666) Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~A~~~g~~gn~i~v~v~~ 240 (666) ..........+................+.+.+..+.....+..................+...+.++|.||+.+++.+.. T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~v~~vv~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~a~~~G~~Gn~i~v~i~~ 240 (663) T protein:vir:10 161 PTLGDNWRIDVSGASGGSAAALALGNIVVDSGVTFGNSEDAPAVMTSPAVMEKYAKFGMPLVSAVYPGEIGSTVEVEIVS 240 (663) T ss_pred eeccccceeEeeeccccccccccccceecccceeeEeeccccccccccchhhhcccccceeeeeecccccccceeEEecc Confidence 55555555555554444444555555666666665555555555554444444555556678889999999999988765 Q ss_pred cccccccccccccccccccccceeeeeeccCcCcccceeeecccccccceeeecccccccccccchhhhHhHhcccCceE Q lcl|Aclame:pro 241 RSAFKNTAPDLTMYPYGGERTAARNLIPYAPQNDNQYAFIVRRDGVVVESYVLSTLKGDKDVYGNSIYMDDFFGRGSSQY 320 (666) Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~et~~ls~~~~~~~~~~~~~~~~~~~~~~~s~~ 320 (666) .................................++.+.+.+..++.+.+.+.++...+.....+...++...+.+..+.+ T Consensus 241 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (663) T protein:vir:10 241 KTAFNSGAQQTIYPFGGTRTSNARGVIQYGPMTDDQFAIIVRRDGIVVESTVLSTRKGDRDVYGSNIFMDDYFRNGGSNF 320 (663) T ss_pred cccccccccccccccccccccccceeeeeccccccceeEEEecCCcceeeeeeeecccccccchhhhhhhhhhccCcceE Confidence 44332221111111122223333344444555667778888888888888888888888888888888888888888888 Q ss_pred EEEeccccccccceeeeecCcccccccccccccccccccchhhhhhhhhcchhhcCccEEecccCCC-chhHHHHHHHHH Q lcl|Aclame:pro 321 IYATAQGWVDGFSGIISLAGGVSANEATTGGVGADPFIGAMMQGWGLFAERESIHVNLLIAGACAGE-GDAFSTVQKHAV 399 (666) Q Consensus 321 i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ll~~p~~~~~-~~~~~~v~~~~~ 399 (666) +.+.............++.+|.+.....+ .+++.+....+...+..+++++++|..... .....+|+.+|+ T Consensus 321 ~~~~~~~~~~~~~~~~~l~gg~d~~~~~~--------~~~~~~~~~~l~~~~~~~~~~~i~~~~~~~~~~~~~~v~~al~ 392 (663) T protein:vir:10 321 IFASSEGWPAGFTGIIQLGGGTSANADVG--------ADELIKGWDLFSDREALHVNLMIAGACGSDGAEIASTVQKYVV 392 (663) T ss_pred EEEeecccCccccceeEcccccCCCcccc--------chhhHHHHHhhhcccccceeEEEeccCCCCchhhHHHHHHHHH Confidence 87777666666666778888877543322 223333444444555667888888765433 345678999999 Q ss_pred HHhhccccEEEEEcCCccccccccccCCHHHHHHHHhhccc---cchhhcccCcceEEEEcCeEEEecCcCCceeEechH Q lcl|Aclame:pro 400 SIGDERQDCLVMVSPPRSTVVNIPVTTAIDNLIAWREGSGN---YNENNMNINTTYAVIDGNYKYQYDKYNDVNRWVPLA 476 (666) Q Consensus 400 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~s~~~~~~~p~~~~~d~~~~~~~~~p~s 476 (666) +||+++++||+++|+|..........++.+++++|++.... ......+++|+|+++||||++++|+.+++.+++||| T Consensus 393 ~~a~~~~~~~ai~d~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~P~~~~~d~~~~~~~~~p~s 472 (663) T protein:vir:10 393 SLADDRQDCVAIVNPPAELMVGIPTSTAVKNIVEWRNGMTGSGEVVDNNMNISSTYAFIIGNYKYQYDKYNDINRWVPLA 472 (663) T ss_pred HHHHhhCCEEEEEecCcccccccccccchHHHHHHHHhccccccchhhccccCcceEEEEccceEEecccCCceEEechh Confidence 99999999999999999888888889999999999987543 233456789999999999999999999999999999 Q ss_pred HHHHHHHHhhhhcCCceecccceecceeeeeeeeeecCChhHHhhhhhccceEEEEecC-CeEEEEcceecCCCccccce Q lcl|Aclame:pro 477 ADIAGLCARTDAVSQPWMSPAGYNRGQIMNVVKLAIEPRKAHRDRLYQAAINPVIGAGG-EGFILMGDKTATTVPSPFDR 555 (666) Q Consensus 477 ~~~ag~~a~~d~~~g~~~span~~~~~i~g~~~~~~~~~~~~~~~Ln~~gIn~i~~~~g-~G~~~wG~rT~~~~~~~~~~ 555 (666) +++||+|||+|.++||||||||+++++|.|+.++++.+++.|++.||++|||||++|++ +|+++||+||+++++++|+| T Consensus 473 ~~vAGl~Ar~D~~~g~~~sPan~~~~~i~g~~~~~~~~~~~~~~~Ln~~gin~i~~~~~~~G~~~wG~rT~s~~~s~~~~ 552 (663) T protein:vir:10 473 ADIAGLCAYTDQVSHPWMSPAGYRRGQIRNCIKLAIEPKQSMRDTMYQVAINPVTGFAGGDGFVLFGDKMATQVPSPFDR 552 (663) T ss_pred HHHHHHHHHhhccCCceEccCCceeccccccccceeccChhHHHHHhhCCceEEEEEeCCCcEEEEcccccCCCCcccce Confidence 99999999999999999999999999999999999999999999999999999999997 79999999999988889999 Q ss_pred eehhhHHHHHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHhcCCeeeeEEEEcccCCCHHHhhCCEEEEEEEEE Q lcl|Aclame:pro 556 INVRRLFNMLKKNIGDSSKYKLFENNDNFTRASFRMEVSQYLSTIRSLGGIYDFRVQCDTTNNTPDVIDRNEFVASMFIK 635 (666) Q Consensus 556 i~vrR~~~~i~~~~~~~~~~~v~epn~~~~~~~i~~~i~~~l~~l~~~gal~g~~v~~d~~~n~~~~i~~G~~~~~i~~~ 635 (666) |||||||+||+++|++.++|+||||||+.+|++|+++|+.||++||++|+|+||+|+||+++||+++|++|+|+|+|+|+ T Consensus 553 i~vrR~~~~i~~si~~~~~~~v~e~n~~~l~~~i~~~i~~~L~~l~~~gal~g~~v~~d~~~nt~~~i~~G~~~~~i~~~ 632 (663) T protein:vir:10 553 INVRRLFNMLKKNIGDTSKYELFENNDAFTRQSFRMETSQYLDGIRSLGGCYDFRVVCDTTNNTPNVIDRNEFVGTIYVK 632 (663) T ss_pred EehhhHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhcCceeeeEEEEcCCCCCHHHhhCCeEEEEEEEE Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred ecCCccEEEEEEEEeecchhHHHHHHHHhcC Q lcl|Aclame:pro 636 PAKSINYIMLNFTAVATGSDFDEIIGPVNQA 666 (666) Q Consensus 636 p~~p~e~i~~~~~~~~~~~~~~e~~~~~~~~ 666 (666) |++|+|||+|||+|++++++|+|++++|+|| T Consensus 633 p~~pae~i~~~~~~~~~~~~~~e~~~~~~~~ 663 (663) T protein:vir:10 633 PPRSINYITLNMVATSTGANFDELIGPMQLA 663 (663) T ss_pred ecCCcceEEEEEEEeecCccHHHHHHHHhcC Confidence 9999999999999999999999999999999 No 5 >protein:vir:6894 Length: 660 # NCBI annotation: gp18 tail sheath protein # Family: family:all:661 # MgeID: mge:140 # MgeName: RB69 # Cross-refs: genbank:acc:NP_861870;genbank:gi:32453661;genbank:GeneID:1494296 Probab=100.00 E-value=2.9e-161 Score=900.74 Aligned_cols=657 Identities=62% Similarity=1.080 Sum_probs=526.9 Q ss_pred CceecCceEEEEecCCccccccCcCceEEEEeccCCCCCcCEEeCCHHHHHHHcCCcCCCchhHHHHHHHHHhCCCeEEE Q lcl|Aclame:pro 1 MTLLSPGFETKETTLSTTIVQSATGRAALVGKFQWGPAFQIIQVTNEVELVNKFGQPDNNTADYFMSGANFLQYGNDLRV 80 (666) Q Consensus 1 ~~~~~PGVyvee~~~~~~i~~v~tsv~~fvG~~~~Gpv~~p~~i~s~~~~~~~fG~~~~~~~~~~~~~~~f~ngg~~~~v 80 (666) |+|++|||||||+|++++|+||+||++||||+|+|||+|+|++|+||.||+|.||++.+.+|++|++++||+|||++||| T Consensus 1 ~~~~~PgVyv~e~~~~~~i~~v~ts~~~fvG~~~~Gp~~~p~~i~s~~~~~~~fG~~~~~~~~~~~~~~~f~~~g~~~~v 80 (660) T protein:vir:68 1 MALLSPGVELKETTVQSTVVNNSTGTAALAGKFQWGPAFQIKQITDEVALVDMFGTPNTDTADYFMSAMNFLQYGNDLRV 80 (660) T ss_pred CccccCceEEEEecCCcccccCCCcceeEEecccCCCCccCEEecCHHHHHHhcCCccCccchhHHHHHHHHhCCCeEEE Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred EEcccCcccccccccccccceeeecccccccccccceeeeccccccccccccccccccceeEEeecccccccccccccee Q lcl|Aclame:pro 81 VRVLNKEKAKNATALAGNIEFEITNEGSNYEVGDTIKIKHNRQDIETAGKVTKVDGDGKVKGVFIPTGKIIAHAKAIGVY 160 (666) Q Consensus 81 vRv~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~a~~~~~~ 160 (666) ||+.+++..++++...+....+...++....+++.+.++.+......................+.++............. T Consensus 81 vRv~~~~~~~~~~~~~~~~~~t~~~~g~~~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ta~~~~~a~~~~~~ 160 (660) T protein:vir:68 81 VRAVDRDTAKNSSPVAGNINFTISSAGTNYRVGDKVVVKYSTDIIEPDGEVTSVDSDGKILNIFIPSGKIIAKAKEIGEY 160 (660) T ss_pred EEecccccccccccccccceeeeeccCcceeeeeeeeeecccccccccccceeeeecCceeeeeeccccccccceeeccc Confidence 99998888877776666667777777766667777766665443333333333333333333333333333333334444 Q ss_pred eecccceeEEEeecccccceeeeeeeeeccceeeeeeccchhhccccceeeeeecccceeeeeeccccccccceeeeeec Q lcl|Aclame:pro 161 PELDGDWTAEFTSSSGNGSAALSVTKIVTDSGLLLTDLETSRANITNQTFLTKLQKYDMPAVSAIYAGEIGNSLEVEILA 240 (666) Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~A~~~g~~gn~i~v~v~~ 240 (666) ..........+............+.....+.+........++...............+.....+...+.||+.+++.+.. T Consensus 161 ~~~~~~~~~~v~~~~~~~~~~~~v~~~~~d~~~~~~~~~ta~~~~~~~~~~~~~~~~~~~~~~A~~~g~~G~~i~v~~~~ 240 (660) T protein:vir:68 161 PELGSNWTAEMSGSSSGLSAVITIDSVVMDSGILLTEVETSEEAITSLTFQESIKKYGVPGVVALYPGELGDQLEIEIVS 240 (660) T ss_pred cccccceeEEeecccccceeeeeeccccccccceeeeeccccccccccceeeeecccCccccccccccccccceEEEEec Confidence 44444444445444444444445555555666555555555554444444444455555667788899999999988755 Q ss_pred ccccccccc-ccccc-cccccccceeeeeeccCcCcccceeeecccccccceeeecccccccccccchhhhHhHhcccCc Q lcl|Aclame:pro 241 RSAFKNTAP-DLTMY-PYGGERTAARNLIPYAPQNDNQYAFIVRRDGVVVESYVLSTLKGDKDVYGNSIYMDDFFGRGSS 318 (666) Q Consensus 241 ~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~et~~ls~~~~~~~~~~~~~~~~~~~~~~~s 318 (666) ......... ..... .....+.....+........+.+.+.+..+|...+++.++...+.........++.....+..+ T Consensus 241 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (660) T protein:vir:68 241 KADYDKGASAQLKIYPDGGTRYSTAKAIFGYGPQTDDQYAIIVRRNDSVVQSVVLSTKRGERDIYGSNIFIDDFFAKGAS 320 (660) T ss_pred cccccccccccceeeecccccccceeeEeecccccccceeeeeecCCcceeeeeeecccccccccccceeeehhhccCcc Confidence 443332211 11111 1112223334444455556677888888899999999998888888777777777777777778 Q ss_pred eEEEEeccccccccceeeeecCcccccccccccccccccccchhhhhhhhhcchhhcCccEEecccCCCc-hhHHHHHHH Q lcl|Aclame:pro 319 QYIYATAQGWVDGFSGIISLAGGVSANEATTGGVGADPFIGAMMQGWGLFAERESIHVNLLIAGACAGEG-DAFSTVQKH 397 (666) Q Consensus 319 ~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ll~~p~~~~~~-~~~~~v~~~ 397 (666) .++.+.............++.+|.+...... .+++.....++...+...+.+|++++...+. ++..+++.+ T Consensus 321 ~~v~~~~~~~~~~~~~~~~~~gg~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~v~~~ 392 (660) T protein:vir:68 321 NYIFATAQGWPKGFSGVIKLNGGLSSNETVE--------AGDLMEAWDLFADRESVNAQLFIAGSCAGESLEVASTVQKH 392 (660) T ss_pred cEEEEeecCCCccccceeeeccccccccccc--------cchhhhHHHHhhhhhccccceeeccccCCCchHHHHHHHHH Confidence 8777766665555555566777665433221 2333444555555666667777777665543 456789999 Q ss_pred HHHHhhccccEEEEEcCCccccccccccCCHHHHHHHHhhccccchhhcccCcceEEEEcCeEEEecCcCCceeEechHH Q lcl|Aclame:pro 398 AVSIGDERQDCLVMVSPPRSTVVNIPVTTAIDNLIAWREGSGNYNENNMNINTTYAVIDGNYKYQYDKYNDVNRWVPLAA 477 (666) Q Consensus 398 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~p~~~~~d~~~~~~~~~p~s~ 477 (666) |++||+++++||+++|+|+.++++.+.+++++++++||+..+.....+.+++|+|+++||||++++|+.++..+++|||+ T Consensus 393 l~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~p~~~~~d~~~~~~~~~p~sg 472 (660) T protein:vir:68 393 VVAIGDSRQDCLVLCSPPRAAVVGIPVNRAVDNLVDWRTASGTYTDNNFNISSTYAAIDGNYKYQYDKYNDVNRWVPLAA 472 (660) T ss_pred HHHHHHhhCCeEEEEcccceeEecCCCCCCHHHHHHHHhhcccccccccccCcceEEEEcCceEEecccCCceEEechhH Confidence 99999999999999999999999999999999999999999999888999999999999999999999999999999999 Q ss_pred HHHHHHHhhhhcCCceecccceecceeeeeeeeeecCChhHHhhhhhccceEEEEecCCeEEEEcceecCCCccccceee Q lcl|Aclame:pro 478 DIAGLCARTDAVSQPWMSPAGYNRGQIMNVVKLAIEPRKAHRDRLYQAAINPVIGAGGEGFILMGDKTATTVPSPFDRIN 557 (666) Q Consensus 478 ~~ag~~a~~d~~~g~~~span~~~~~i~g~~~~~~~~~~~~~~~Ln~~gIn~i~~~~g~G~~~wG~rT~~~~~~~~~~i~ 557 (666) ++||+|||+|.++||||||+|+++.+|.|+.++++.+++.|++.||++||||||+|+++|+++||+||+++++++|+||| T Consensus 473 ~~AGl~Ar~d~~~g~~~span~~~~~i~g~~~~~~~~~~~~~~~Ln~~gIn~i~~~~~~G~~~wG~rT~~~~~s~~~~i~ 552 (660) T protein:vir:68 473 DIAGLCARTDNISQPWMSPAGYNRGQILNVIKLAIETRQAQRDRLYQEAINPVTGTGGDGYVLYGDKTATSVPSPFDRIN 552 (660) T ss_pred HHHHHHHHHhccCCcEEccCCeeeceeeccceeeecCChhHHHHHhhCCceEEEEecCCeEEEEcceecCCCCcccceEe Confidence 99999999999999999999999999999999999999999999999999999999999999999999999989999999 Q ss_pred hhhHHHHHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHhcCCeeeeEEEEcccCCCHHHhhCCEEEEEEEEEec Q lcl|Aclame:pro 558 VRRLFNMLKKNIGDSSKYKLFENNDNFTRASFRMEVSQYLSTIRSLGGIYDFRVQCDTTNNTPDVIDRNEFVASMFIKPA 637 (666) Q Consensus 558 vrR~~~~i~~~~~~~~~~~v~epn~~~~~~~i~~~i~~~l~~l~~~gal~g~~v~~d~~~n~~~~i~~G~~~~~i~~~p~ 637 (666) |||||+||+++|++.++|+||||||+.+|++|+++|+.||++||++|+|+||+|+||+++||++||++|+|+|+|+++|+ T Consensus 553 vrR~~~~i~~si~~~~~~~v~epn~~~~~~~i~~~i~~~L~~l~~~gal~gf~V~~d~~~nt~~~i~~G~~~~~i~~~p~ 632 (660) T protein:vir:68 553 VRRLFNMVKTNIGSASKYRLFELNNAFTRSSFRTETSQYLQGIKALGGVYNFKVVCDTTNNTPAVIDRNEFVATFYLQPA 632 (660) T ss_pred hhhHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhcCceeeeEEEEecCCCCHHHhhCCeEEEEEEEEec Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred CCccEEEEEEEEeecchhHHHHHHHHhc Q lcl|Aclame:pro 638 KSINYIMLNFTAVATGSDFDEIIGPVNQ 665 (666) Q Consensus 638 ~p~e~i~~~~~~~~~~~~~~e~~~~~~~ 665 (666) +|+|||+|||+|++++++|+|++++|.+ T Consensus 633 ~pae~i~l~~~~~~~~~~~~e~~~~v~~ 660 (660) T protein:vir:68 633 RSINYITLNFVATATGADFDELIGAVGG 660 (660) T ss_pred CCcceEEEEEEEeecCccHHHHHHhhcC Confidence 9999999999999999999999999999 No 6 >protein:vir:108052 Length: 660 # NCBI annotation: gp18 tail sheath protein # Family: family:all:661 # MgeID: mge:2002 # MgeName: JS98 # Cross-refs: genbank:acc:YP_001595294;genbank:gi:161622600;genbank:GeneID:5783771 Probab=100.00 E-value=3.2e-161 Score=900.48 Aligned_cols=653 Identities=66% Similarity=1.084 Sum_probs=537.3 Q ss_pred CceecCceEEEEecCCccccccCcCceEEEEeccCCCCCcCEEeCCHHHHHHHcCCcCCCchhHHHHHHHHHhCCCeEEE Q lcl|Aclame:pro 1 MTLLSPGFETKETTLSTTIVQSATGRAALVGKFQWGPAFQIIQVTNEVELVNKFGQPDNNTADYFMSGANFLQYGNDLRV 80 (666) Q Consensus 1 ~~~~~PGVyvee~~~~~~i~~v~tsv~~fvG~~~~Gpv~~p~~i~s~~~~~~~fG~~~~~~~~~~~~~~~f~ngg~~~~v 80 (666) |+|+||||||||+|++++|+||+||++||||+|+|||+++|++|+||.||++.||+|++.+|++|++++||+|||++||| T Consensus 1 ~~~~~Pgvyv~e~~~~~~i~~~~t~~~~~vg~~~~gp~~~p~~v~s~~~~~~~fg~~~~~~~~~~~~~~~f~~~g~~~~v 80 (660) T protein:vir:10 1 MALLSPGIELKETSVQSTVVRNATGRAALVGKFQWGPAFQVTQITNEVELVDLFGGPNNEVADYFMSGMNFLQYGNDLRT 80 (660) T ss_pred CceecCceEEEeecCCccccCCCcccceEEeecCCCCCccCeEcCCHHHHHHHcCCcCCCchhHHHHHHHHHhCCceEEE Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred EEcccCcccccccccccccceeeecccccccccccceeeeccccccccccccccccccceeEEeecccccccccccccee Q lcl|Aclame:pro 81 VRVLNKEKAKNATALAGNIEFEITNEGSNYEVGDTIKIKHNRQDIETAGKVTKVDGDGKVKGVFIPTGKIIAHAKAIGVY 160 (666) Q Consensus 81 vRv~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~a~~~~~~ 160 (666) ||+.+.+..++++...+.+..+...++....+++.+.+..........+.+.....++........+......+...... T Consensus 81 vrv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~v~~~~a~g~~~~~~~~ta~~~~~a~~v~~~ 160 (660) T protein:vir:10 81 VRVVSREFAKNASPIAGNIETTITTAGSNYAVGDKINIKYNQTVVESEGRVTSVDTDGKILSVFIPSAKIIAYARSLNQY 160 (660) T ss_pred EEecccccccccccccccceeEEeeccccccccceeeEeeccccccccccceeeccccceeeeccccccccccccccccc Confidence 99999887777777777778888888888888988888777665554444444444444444444444444444455555 Q ss_pred eecccceeEEEeecccccceeeeeeeeeccceeeeeeccchhhccccceeeeeecccceeeeeeccccccccceeeeeec Q lcl|Aclame:pro 161 PELDGDWTAEFTSSSGNGSAALSVTKIVTDSGLLLTDLETSRANITNQTFLTKLQKYDMPAVSAIYAGEIGNSLEVEILA 240 (666) Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~A~~~g~~gn~i~v~v~~ 240 (666) ......+...+.........+.++...+.+++..+........................+...+...+.||+.+++.+.. T Consensus 161 ~~~~~~~~~~~~~~~~~~~~a~sv~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~g~~G~~i~v~i~~ 240 (660) T protein:vir:10 161 PTLGPAWTAEVTSASSGVSGTITVGKIVTDSGILLTEAENSEEAITSLEFQAALKKFAMPGVVALYPGEIGSTLEVEIVS 240 (660) T ss_pred cccccceeEEEecccCccccceeeeeeeccCcceEEeeeccccccccccceeeccccccceeeeecccccCcceeEEEee Confidence 55556666666666666666667777777766655554444333333333333334444566777889999998887754 Q ss_pred cccccccccccccccccccccce-----eeeeeccCcCcccceeeecccccccceeeecccccccccccchhhhHhHhcc Q lcl|Aclame:pro 241 RSAFKNTAPDLTMYPYGGERTAA-----RNLIPYAPQNDNQYAFIVRRDGVVVESYVLSTLKGDKDVYGNSIYMDDFFGR 315 (666) Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~v~~~g~~~et~~ls~~~~~~~~~~~~~~~~~~~~~ 315 (666) ...... .+........+..+ ...........+.+.+++..+|...|++.++...+.........++.+.+.+ T Consensus 241 ~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (660) T protein:vir:10 241 KAAYEA---GSSKMLDVYPGGGTRASIAKAVFNYGPQTDDQYAIIVRRDGAIVESVVLSTKEGEKDVYGNNIYLDDYFAK 317 (660) T ss_pred ccccCC---cceeEEeeeeccceeeEEeeeecccccccccccccccccCCcccceeeeeccccccccccceeeeehhhcC Confidence 332221 22222222222211 1112223345566778888899999999888877777777776777777767 Q ss_pred cCceEEEEeccccccccceeeeecCcccccccccccccccccccchhhhhhhhhcchhhcCccEEecccCCCc-hhHHHH Q lcl|Aclame:pro 316 GSSQYIYATAQGWVDGFSGIISLAGGVSANEATTGGVGADPFIGAMMQGWGLFAERESIHVNLLIAGACAGEG-DAFSTV 394 (666) Q Consensus 316 ~~s~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ll~~p~~~~~~-~~~~~v 394 (666) ..+.++.+.............++.++.+..... ..+++..+++++...+...++||++|++.+.. .+..+| T Consensus 318 ~~~~~v~~~~~~~~~~~~~~~~l~gg~~~~~~~--------t~~~~~~~~~~~~~~~~~~~~~l~~p~~~~~~~~~~~~v 389 (660) T protein:vir:10 318 GTSNYIYATSLNWPKGFSGIINLSGGISANDKV--------TAGDLMQGWDLFADREALHINLLIAGAVAGEGDEVASTV 389 (660) T ss_pred CCccEEEEEeccCCCCcccceeeeccccCcccc--------ccchhhhhhhhhhhhhhcccceEEEcCcCCCchhhhHHH Confidence 777777776666655556667777776653322 23456667778888888889999999987643 456789 Q ss_pred HHHHHHHhhccccEEEEEcCCccccccccccCCHHHHHHHHhhccccchhhcccCcceEEEEcCeEEEecCcCCceeEec Q lcl|Aclame:pro 395 QKHAVSIGDERQDCLVMVSPPRSTVVNIPVTTAIDNLIAWREGSGNYNENNMNINTTYAVIDGNYKYQYDKYNDVNRWVP 474 (666) Q Consensus 395 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~p~~~~~d~~~~~~~~~p 474 (666) +++|++||+++++||+++|+|.....+....++++++++||+..+.....+.+++|+|+++||||++++|+.+++.+++| T Consensus 390 ~~al~~~~~~~~~~~aiid~p~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~s~~~~~~~p~~~~~d~~~~~~~~~p 469 (660) T protein:vir:10 390 QKHVVSIADERQDCLAFISPPKGLLVNVPLTRAVDNLIDWRTGAGTFDANNMNISTTYAAIDGNYKYQYDKYNDVNRWVP 469 (660) T ss_pred HHHHHHHHHhhCCEEEEEecCcccccccccccCHHHHHHHHhhcccccccccccCcceEEEEcCceEEecccCCceeEec Confidence 99999999999999999999999889999999999999999999999999999999999999999999999999999999 Q ss_pred hHHHHHHHHHhhhhcCCceecccceecceeeeeeeeeecCChhHHhhhhhccceEEEEecC-CeEEEEcceecCCCcccc Q lcl|Aclame:pro 475 LAADIAGLCARTDAVSQPWMSPAGYNRGQIMNVVKLAIEPRKAHRDRLYQAAINPVIGAGG-EGFILMGDKTATTVPSPF 553 (666) Q Consensus 475 ~s~~~ag~~a~~d~~~g~~~span~~~~~i~g~~~~~~~~~~~~~~~Ln~~gIn~i~~~~g-~G~~~wG~rT~~~~~~~~ 553 (666) ||+++||+|||+|.++||||||||+++++|.|+.++++.+++.|++.||++|||||++|++ +||++||+||+++++++| T Consensus 470 ~sg~~AGl~Ar~D~~~g~~~sPan~~~~~i~g~~~~~~~~~~~e~~~Ln~~gIn~i~~~~~~~G~~~wG~rT~~~~~s~~ 549 (660) T protein:vir:10 470 LAADLAGLCARTDDVSQPWMSPAGYNRGQILNVLKLAIEPRQAQRDRMYQEAINPVVGFAGGDGFVLFGDKTATKVPSPM 549 (660) T ss_pred hhHHHHHHHHHhhccCCcEEccCCeeeceeeccceeeecCChhhHHhHhhCCceEEEEeeCCCcEEEEcccccCCCCccc Confidence 9999999999999999999999999999999999999999999999999999999999986 799999999999998999 Q ss_pred ceeehhhHHHHHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHhcCCeeeeEEEEcccCCCHHHhhCCEEEEEEE Q lcl|Aclame:pro 554 DRINVRRLFNMLKKNIGDSSKYKLFENNDNFTRASFRMEVSQYLSTIRSLGGIYDFRVQCDTTNNTPDVIDRNEFVASMF 633 (666) Q Consensus 554 ~~i~vrR~~~~i~~~~~~~~~~~v~epn~~~~~~~i~~~i~~~l~~l~~~gal~g~~v~~d~~~n~~~~i~~G~~~~~i~ 633 (666) +||||||||+||+++|++.++|+||||||+.||++|+++|+.||++||++|+|+||+|+||+++||++||++|+|+|+|+ T Consensus 550 ~~i~vrR~~~~i~~si~~~~~~~v~epn~~~l~~~i~~~i~~fL~~l~~~gal~g~~V~~d~~~nt~~di~~G~~~~~i~ 629 (660) T protein:vir:10 550 DHINVRRLFNMLKKNIGDASKYKLFELNDNFTRSSFRMEVSQYLDGIKALGGIYEGRVVCDTTVNTPAVIDRNEFIANIY 629 (660) T ss_pred ceEehhhHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeEEEEcCCCCCHHHhhCCeEEEEEE Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred EEecCCccEEEEEEEEeecchhHHHHHHHHh Q lcl|Aclame:pro 634 IKPAKSINYIMLNFTAVATGSDFDEIIGPVN 664 (666) Q Consensus 634 ~~p~~p~e~i~~~~~~~~~~~~~~e~~~~~~ 664 (666) ++|++|||||+|||+|++++++|+|++++|- T Consensus 630 ~~P~~pae~I~~~~~~~~~~~~~~e~~~~~~ 660 (660) T protein:vir:10 630 VKPARSINYITLNFVATSTGADFDELIGPLV 660 (660) T ss_pred EEecCCccEEEEEEEEeecCccHHHHhhhcC Confidence 9999999999999999999999999999999 No 7 >protein:vir:100539 Length: 663 # NCBI annotation: gp18 tail sheath monomer # Family: family:all:661 # MgeID: mge:1488 # MgeName: 25 # Cross-refs: genbank:acc:YP_656380;genbank:gi:109290131;genbank:GeneID:4156517 Probab=100.00 E-value=2.3e-159 Score=890.27 Aligned_cols=658 Identities=59% Similarity=0.996 Sum_probs=531.8 Q ss_pred CceecCceEEEEecCCccccccCcCceEEEEeccCCCCCcCEEeCCHHHHHHHcCCcCCCchhHHHHHHHHHhCCCeEEE Q lcl|Aclame:pro 1 MTLLSPGFETKETTLSTTIVQSATGRAALVGKFQWGPAFQIIQVTNEVELVNKFGQPDNNTADYFMSGANFLQYGNDLRV 80 (666) Q Consensus 1 ~~~~~PGVyvee~~~~~~i~~v~tsv~~fvG~~~~Gpv~~p~~i~s~~~~~~~fG~~~~~~~~~~~~~~~f~ngg~~~~v 80 (666) |+|++|||||||+|++++|+||+||++||||+|+|||+|+|++|+||.||++.||+|++.+|++|++++||+|||++||| T Consensus 1 ~~~~~Pgvyv~e~~~~~~~~~v~t~~~~fvG~~~~gp~~~p~~i~s~~~~~~~fG~~~~~~~~~~~v~~~f~ngg~~~~v 80 (663) T protein:vir:10 1 MALLSPGIEMKETSINSTVVRSATGRAALVGKFAWGPAYEIRQVTNEVELVDMFGSPDNVTAPYFMSAMNFLQYGNDLRL 80 (663) T ss_pred CccccCceEEEEecCcccccccccccceeeeccccCCCCcCEEecCHHHHHHHcCCcccccchHHHHHHHHHhCCCeEEE Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred EEcccCcccccccccccccceeeecccccccccccceeeeccccccccccccccccccceeEEeecccccccccccccee Q lcl|Aclame:pro 81 VRVLNKEKAKNATALAGNIEFEITNEGSNYEVGDTIKIKHNRQDIETAGKVTKVDGDGKVKGVFIPTGKIIAHAKAIGVY 160 (666) Q Consensus 81 vRv~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~a~~~~~~ 160 (666) |||.+.++.+++++.......+....++++.+++.+.+...................+.....+.+.............. T Consensus 81 vRv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~~~~~g~~~~~~~~~a~~~~~a~~~~~~ 160 (663) T protein:vir:10 81 VRVIDMEQAKNASPLFNQIEVTITTEGQGYTVGDTVSIKHNTTTVTEEGKVTKVDADGKIKALFVPSSAVIAKAKQLGTY 160 (663) T ss_pred EecCCcccccccccccccceeeEeecccCccccceeeecccccccccCcceeeeccCCceeEEEeccccccccccccccc Confidence 99999888888777766667777777788888888877766655444443333344444444444443333333334444 Q ss_pred eecccceeEEEeecccccceeeeeeeeeccceeeeeeccchhhccccceeeeeecccceeeeeeccccccccceeeeeec Q lcl|Aclame:pro 161 PELDGDWTAEFTSSSGNGSAALSVTKIVTDSGLLLTDLETSRANITNQTFLTKLQKYDMPAVSAIYAGEIGNSLEVEILA 240 (666) Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~A~~~g~~gn~i~v~v~~ 240 (666) ......+...+.........+..+...+.+++.++.....+..................+...+..++.||+.+++.+.. T Consensus 161 ~~~~~a~~~~v~~~~~~~~~a~av~~i~~dg~vt~~~~~~a~~~~~~~~~~~~~~~~~~~~~~a~~~g~~G~~i~v~~~~ 240 (663) T protein:vir:10 161 PVLGDNWRAEVSGASGGSAATLTLGGIVVDSGVTFGNSEEAPDVMTSTKVLANFAKYGMPLISAVYPGEIGSTVEVEVIS 240 (663) T ss_pred cccccceeeEEeeccccccccceeEeeecCCceeEEeeeccccccccceeeeeccccccceeeeecccccCcceeEeecc Confidence 44444555555455555555556666667777776666666655555555555666666778888999999999998766 Q ss_pred cccccccccccccccccccccceeeeeeccCcCcccceeeecccccccceeeecccccccccccchhhhHhHhcccCceE Q lcl|Aclame:pro 241 RSAFKNTAPDLTMYPYGGERTAARNLIPYAPQNDNQYAFIVRRDGVVVESYVLSTLKGDKDVYGNSIYMDDFFGRGSSQY 320 (666) Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~et~~ls~~~~~~~~~~~~~~~~~~~~~~~s~~ 320 (666) ................+.............+...+.+.+++..+|...|++.++...+.....+...++...+.+..+.+ T Consensus 241 ~~~~~~~~~~~v~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~e~~~ls~~~~~~~~~~~~~~~~~~~~~~~s~~ 320 (663) T protein:vir:10 241 KTAFQSGAAQPIYPFGGTRASNARSVIQYGPMTDDQFAIIVRRDGIVVESTVLSTRRGDRDVYGNNIFMDDYFRNGSSNF 320 (663) T ss_pred cccccccceeeecccCcccccccccccccccccchhhcccccCCCcccceeeeeccccccccchhhhhhhhhhcCcccce Confidence 55443332222211112222223333444556667788888889999999999998888888888888888887878888 Q ss_pred EEEeccccccccceeeeecCcccccccccccccccccccchhhhhhhhhcch-hhcCccEEecccCCCchhHHHHHHHHH Q lcl|Aclame:pro 321 IYATAQGWVDGFSGIISLAGGVSANEATTGGVGADPFIGAMMQGWGLFAERE-SIHVNLLIAGACAGEGDAFSTVQKHAV 399 (666) Q Consensus 321 i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~ll~~p~~~~~~~~~~~v~~~~~ 399 (666) +.+.............++.+|.+.....+ .+++.+....+...+ .+.+.+++.|..........+|+.+|+ T Consensus 321 v~~~~~~~~~~~~~~~~l~gg~~~~~~~~--------~~d~~~~~~~l~~~~~~~~~~~i~~~~~~~~~~~~~~v~~~l~ 392 (663) T protein:vir:10 321 IYASSVNWPAGFTGIIQLGGGASANNAVG--------SDELIAGWDLFADREALHVNLMIAGACKSDGVAVASTVQKHVV 392 (663) T ss_pred eEeeccccCcccceeEEecccccCcccch--------hhhhhhHHhhhccccccCceEEEeecCCCCchhhHHHHHHHHH Confidence 87776666666666678888776543222 122222333333333 333445556666666667789999999 Q ss_pred HHhhccccEEEEEcCCccccccccccCCHHHHHHHHhhcccc---chhhcccCcceEEEEcCeEEEecCcCCceeEechH Q lcl|Aclame:pro 400 SIGDERQDCLVMVSPPRSTVVNIPVTTAIDNLIAWREGSGNY---NENNMNINTTYAVIDGNYKYQYDKYNDVNRWVPLA 476 (666) Q Consensus 400 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~s~~~~~~~p~~~~~d~~~~~~~~~p~s 476 (666) .||+++++||+++|+|+....+.......+++.+||+.+... .....+++|+|+++||||++++|+.+++.+++||| T Consensus 393 ~~~~~~~~~~ai~d~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~p~~~~~d~~~~~~~~~p~s 472 (663) T protein:vir:10 393 ALADDRQDCVAFVNPPSELLVGVPTTQAVKNIVEWRNGVTTGGEVVDNNMNISSTYAFISGNYKYQYDKYNDINRWVPLS 472 (663) T ss_pred HHHHhhCCEEEEEecCcccccccchhhhHHHHHHHhhhccccchhhhhhcccCcceEEEEecceeEecccCCceEEechH Confidence 999999999999999999888888888999999999865432 23345789999999999999999999999999999 Q ss_pred HHHHHHHHhhhhcCCceecccceecceeeeeeeeeecCChhHHhhhhhccceEEEEecC-CeEEEEcceecCCCccccce Q lcl|Aclame:pro 477 ADIAGLCARTDAVSQPWMSPAGYNRGQIMNVVKLAIEPRKAHRDRLYQAAINPVIGAGG-EGFILMGDKTATTVPSPFDR 555 (666) Q Consensus 477 ~~~ag~~a~~d~~~g~~~span~~~~~i~g~~~~~~~~~~~~~~~Ln~~gIn~i~~~~g-~G~~~wG~rT~~~~~~~~~~ 555 (666) +++||+|||+|.++||||||+|+++++|.|+.++++.+++.|++.||++|||+|+.|++ +||++||+||+++++++|+| T Consensus 473 ~~vAGl~Ar~D~~~g~~~span~~~~~i~g~~~~~~~~~~~~~~~Ln~~gin~i~~~~~~~G~~~wG~rT~s~~~s~~~~ 552 (663) T protein:vir:10 473 ADIAGLCAYTDQVGHPWMSPAGYRRGQLRNTIKLAIEPKQSLRDTMYQVSINPVTGFAGGDGFVLFGDKMATQVPSPFDR 552 (663) T ss_pred HHHHHHHHHhhccCCcEEccCCeeecceeccccceeecCchhHHHHHhCCCcEEEEeeCCCcEEEEcccccCCCCcccce Confidence 99999999999999999999999999999999999999999999999999999999997 79999999999998889999 Q ss_pred eehhhHHHHHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHhcCCeeeeEEEEcccCCCHHHhhCCEEEEEEEEE Q lcl|Aclame:pro 556 INVRRLFNMLKKNIGDSSKYKLFENNDNFTRASFRMEVSQYLSTIRSLGGIYDFRVQCDTTNNTPDVIDRNEFVASMFIK 635 (666) Q Consensus 556 i~vrR~~~~i~~~~~~~~~~~v~epn~~~~~~~i~~~i~~~l~~l~~~gal~g~~v~~d~~~n~~~~i~~G~~~~~i~~~ 635 (666) ||+||||+||+++|++.++|+||||||+.||++|+++|+.||++||++|+|+||+|+||+++||++||++|+|+|+|+++ T Consensus 553 i~vrR~~~~i~~si~~~~~~~v~epn~~~l~~~i~~~i~~~L~~l~~~gal~gf~V~~d~~~nt~~~i~~G~~~~~i~~~ 632 (663) T protein:vir:10 553 INVRRLFNMLKKNIGDTSKYELFENNDAFTRQSFRMEVSQYLDNIRSLGGVYDFRVVCDTTNNTPQVIDSNEFVATIYIK 632 (663) T ss_pred EehhhHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeEEEEcCCCCCHHHhhCCeEEEEEEEE Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred ecCCccEEEEEEEEeecchhHHHHHHHHhcC Q lcl|Aclame:pro 636 PAKSINYIMLNFTAVATGSDFDEIIGPVNQA 666 (666) Q Consensus 636 p~~p~e~i~~~~~~~~~~~~~~e~~~~~~~~ 666 (666) |++|+|||+|||+|++++++|+|++++|||| T Consensus 633 p~~pae~I~~~~~~~~~~~~f~e~~~~~~~~ 663 (663) T protein:vir:10 633 APRSINYITLNFVATSTGANFDELIGPAQLA 663 (663) T ss_pred ecCCcceEEEEEEEEecCccHHHHHHHHhcC Confidence 9999999999999999999999999999999 No 8 >protein:vir:106427 Length: 679 # NCBI annotation: gp18 tail sheath protein # Family: family:all:661 # MgeID: mge:1474 # MgeName: Aeh1 # Cross-refs: genbank:acc:NP_944106;genbank:gi:38640150;genbank:GeneID:2658188 Probab=100.00 E-value=3.5e-159 Score=889.29 Aligned_cols=656 Identities=53% Similarity=0.934 Sum_probs=503.6 Q ss_pred CceecCceEEEEecCCccccccCcCceEEEEeccCCCCCcCEEeCCHHHHHHHcCCcCCCchhHHHHHHHHHhCCCeEEE Q lcl|Aclame:pro 1 MTLLSPGFETKETTLSTTIVQSATGRAALVGKFQWGPAFQIIQVTNEVELVNKFGQPDNNTADYFMSGANFLQYGNDLRV 80 (666) Q Consensus 1 ~~~~~PGVyvee~~~~~~i~~v~tsv~~fvG~~~~Gpv~~p~~i~s~~~~~~~fG~~~~~~~~~~~~~~~f~ngg~~~~v 80 (666) |+|+||||||||+|++++|+||+||++||||+|+|||+|+|++|+||.||++.||+|++.+|++|++++||+|||++||| T Consensus 1 ~~~~~Pgvyv~e~~~~~~i~~~~t~~~~~vg~~~~gp~~~p~~i~s~~~~~~~fg~~~~~~~~~~~~~~~f~~gg~~~~v 80 (679) T protein:vir:10 1 MTLLSPGVETKEINLQTTIARSSTGRAALVGKFNWGPAYQISQVVSEVDLVDKFGRPDDQTADSFFSGVNFLNYGNDLRL 80 (679) T ss_pred CceecCceEEEeecCCcccccCccccceeeecccCCCCccCEEecCHHHHHHHcCCcccccchHHHHHHHHHhCCCeEEE Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred EEcccCcccccccccccccceeeecccccccccccceeeeccccccccccccccccccceeEEeecccccccccccccee Q lcl|Aclame:pro 81 VRVLNKEKAKNATALAGNIEFEITNEGSNYEVGDTIKIKHNRQDIETAGKVTKVDGDGKVKGVFIPTGKIIAHAKAIGVY 160 (666) Q Consensus 81 vRv~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~a~~~~~~ 160 (666) |||.+.+..+++....+....+....+....+++.+++...... ............+.....+.........+...+.. T Consensus 81 vrv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~s~-~~~~~~~~~~~~~~~~~~~v~~~~~~~~a~~~~~~ 159 (679) T protein:vir:10 81 VRVLNETKSRNSSALYQSLSYTITSPGVDYKVGDVVNVLQGGNV-IATGKVTVVNASGGIVAFYVPTAAIIDKAKSLNDY 159 (679) T ss_pred EEccCcccccccccccccccccccccccccccccceeeeeCCCc-ccceeEEEeeccCceeeeeeccccccccccccccc Confidence 99999888877776666666777777766667776665544322 11222222222222222222222222222222222 Q ss_pred eecccceeEEEeecccc--cceeeeeeeeeccceeeeeeccchhhccc-----cceeeeeecccceeeeeeccccccccc Q lcl|Aclame:pro 161 PELDGDWTAEFTSSSGN--GSAALSVTKIVTDSGLLLTDLETSRANIT-----NQTFLTKLQKYDMPAVSAIYAGEIGNS 233 (666) Q Consensus 161 ~~~~~~~~~~~~~~~~~--~~~a~~~~~~~~~~~~~~~~~~~a~~~~~-----~~~~~~~~~~~~~~~~~A~~~g~~gn~ 233 (666) ..+.............. ......+.....+.+..+.....+..... .............+...+..++.|++. T Consensus 160 ~~l~~a~~~~~~~~t~~~g~~~~~~v~~v~~~~~~~~~~~~~a~~~i~~~~~~~~t~~~~~~~~~~~~~~A~~~g~~gn~ 239 (679) T protein:vir:10 160 PALDNAWQIQFAAGGPGAGQAATATVVGINLDSTIFVPNDEYAMSAISERSETKRTFIDICEEMKVPAIVARYAGTYGDN 239 (679) T ss_pred ceecccceeeeeeccccccceeeeeeeeeccCCceeeccccccccccccccccchhhhhhhhccccceeeeecccccCCc Confidence 22222222221111111 11122222233333333322222221111 111112222334456677788999999 Q ss_pred eeeeeecccccccccc-ccccccccc-----------cccceeeeeeccCcCcccceeeecccccccceeeecccccccc Q lcl|Aclame:pro 234 LEVEILARSAFKNTAP-DLTMYPYGG-----------ERTAARNLIPYAPQNDNQYAFIVRRDGVVVESYVLSTLKGDKD 301 (666) Q Consensus 234 i~v~v~~~~~~~~~~~-~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~et~~ls~~~~~~~ 301 (666) +.+.+........... ......... ..................+.+.+...+...|.+.++...+... T Consensus 240 i~v~~va~~~~~~~~~~~a~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvv~~~g~~~~~~~~~~~~~~~~ 319 (679) T protein:vir:10 240 IKVLMIAYKDYYKFNEAGKIVSVNTINPKVFPTGLDYGNVTPSSYLEFGPQNESQFAFIVFNNGVAVESKILSTKPGDRD 319 (679) T ss_pred ceEEEEeecccccccccccccccccccccccccccccccceeeeecccccccccceeeEEecccccccceeeeccccccc Confidence 8876644322211100 000000000 0111111222233444566777778888889999888888887 Q ss_pred cccchhhhHhHhcccCceEEEEeccccccccceeeeecCcccccccccccccccccccchhhhhhhhhcchhhcCccEEe Q lcl|Aclame:pro 302 VYGNSIYMDDFFGRGSSQYIYATAQGWVDGFSGIISLAGGVSANEATTGGVGADPFIGAMMQGWGLFAERESIHVNLLIA 381 (666) Q Consensus 302 ~~~~~~~~~~~~~~~~s~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ll~~ 381 (666) ......++...+.+..+.++..............+++.+|.+..... ..+++.++++++++.+...++||++ T Consensus 320 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~gg~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~l~~ 391 (679) T protein:vir:10 320 IYGTSIYINEYFGNGYSSFVQGVAESWPVGYTGVLAFGGGQSSNTDI--------SAAEFMKGWDMFADREHTDVNLFIA 391 (679) T ss_pred ccchhhhhhhhhcCcccceeeeccccccccccceeeccCCccCCCcc--------chhhhhhhhhhhhcccccccceEEe Confidence 77788888888877777777777666666666677788877653322 2456778889999999999999999 Q ss_pred cccCCCc-hhHHHHHHHHHHHhhccccEEEEEcCCccccccccccCCHHHHHHHHhhccc---cchhhcccCcceEEEEc Q lcl|Aclame:pro 382 GACAGEG-DAFSTVQKHAVSIGDERQDCLVMVSPPRSTVVNIPVTTAIDNLIAWREGSGN---YNENNMNINTTYAVIDG 457 (666) Q Consensus 382 p~~~~~~-~~~~~v~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~s~~~~~~~ 457 (666) |++.... +....|+.+|++||+++++||+++|+|+....+.+..++.+++..||+..+. ......+++|+|+++|| T Consensus 392 p~~~~~~~~~~~~v~~~l~~~~~~~~~~~ai~d~p~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~s~~~~~~~ 471 (679) T protein:vir:10 392 GAVAGEGAQIASTVQKAVVAIADERRDCLVLISPPREYMINQPAASVVRKLVDWRRGVNQAGISLDDNMNIGTTYASVDG 471 (679) T ss_pred cCCCCCchhhhHHHHHHHHHHHHhhCCeEEEEeccccccccccccchHHHHHHHHhhcccccchhhhhhccCcceEEEEc Confidence 9987654 3457899999999999999999999999999999999999999999987543 33445678999999999 Q ss_pred CeEEEecCcCCceeEechHHHHHHHHHhhhhcCCceecccceecceeeeeeeeeecCChhHHhhhhhccceEEEEecCCe Q lcl|Aclame:pro 458 NYKYQYDKYNDVNRWVPLAADIAGLCARTDAVSQPWMSPAGYNRGQIMNVVKLAIEPRKAHRDRLYQAAINPVIGAGGEG 537 (666) Q Consensus 458 p~~~~~d~~~~~~~~~p~s~~~ag~~a~~d~~~g~~~span~~~~~i~g~~~~~~~~~~~~~~~Ln~~gIn~i~~~~g~G 537 (666) ||++++|+.++..+++|||+++||+|||+|.++||||||+|+++.+|.|+.++++.+++.|++.||++|||||++|+++| T Consensus 472 p~~~~~d~~~~~~~~~p~sg~vAGl~Ar~D~~~g~~~sPan~~~~~i~g~~~~~~~~~~~~~~~Ln~~gin~i~~~~g~G 551 (679) T protein:vir:10 472 NYKYQYDKYNDVNRWIPLAADIAGLCARTDTVGQPWQSPAGFNRGQIVNVIKLAVDTRQAHRDEMYTNGINPIVGFAGQG 551 (679) T ss_pred cceeeecccCCceEEechHHHHHHHHHHhhccCCcEECcCCeeeccccccccceeecChhhHHhhhhCCceEEEEecCCe Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred EEEEcceecCCCccccceeehhhHHHHHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHhcCCeeeeEEEEcccC Q lcl|Aclame:pro 538 FILMGDKTATTVPSPFDRINVRRLFNMLKKNIGDSSKYKLFENNDNFTRASFRMEVSQYLSTIRSLGGIYDFRVQCDTTN 617 (666) Q Consensus 538 ~~~wG~rT~~~~~~~~~~i~vrR~~~~i~~~~~~~~~~~v~epn~~~~~~~i~~~i~~~l~~l~~~gal~g~~v~~d~~~ 617 (666) +++||+||+++++++|+||||||||+|||++|++.++|+||||||+.+|++|+++|+.||++||++|+|+||+|+||+++ T Consensus 552 ~~~wG~rT~~~~~s~~~~i~vrR~~~~i~~si~~~~~~~v~epn~~~~~~~i~~~i~~fL~~l~~~gal~gf~v~~d~~~ 631 (679) T protein:vir:10 552 YILYGDKTASQAPTPFDRINVRRLFNLLKKSISESAKYKLFELNDAFTRSSFRSEVGSYLDTIRSLGGIYDFRVVCDESN 631 (679) T ss_pred EEEEcccccCCCCcccceEehhhHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeEEEEcCCC Confidence 99999999999888999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred CCHHHhhCCEEEEEEEEEecCCccEEEEEEEEeecchhHHHHHHHHhc Q lcl|Aclame:pro 618 NTPDVIDRNEFVASMFIKPAKSINYIMLNFTAVATGSDFDEIIGPVNQ 665 (666) Q Consensus 618 n~~~~i~~G~~~~~i~~~p~~p~e~i~~~~~~~~~~~~~~e~~~~~~~ 665 (666) ||++||++|+|+|+|+++|++|+|||+|||+|++++.+|+|++++||| T Consensus 632 nt~~~i~~G~~~~~i~~~p~~pae~i~~~~~~~~~~~~~~e~~~~~~~ 679 (679) T protein:vir:10 632 NTPAVIDRNEFVATILIKPARSINYITLSFVATSTGADFDELVGSFQQ 679 (679) T ss_pred CCHHHhhCCeEEEEEEEEecCCccEEEEEEEEeecCccHHHHHHHhcC Confidence 999999999999999999999999999999999999999999999999 No 9 >protein:vir:103456 Length: 659 # NCBI annotation: tail sheath monomer # Family: family:all:661 # MgeID: mge:1542 # MgeName: RB32 # Cross-refs: genbank:acc:YP_803108;genbank:gi:116326388;genbank:GeneID:4405485 Probab=100.00 E-value=1.7e-157 Score=880.02 Aligned_cols=656 Identities=63% Similarity=1.064 Sum_probs=512.0 Q ss_pred CceecCceEEEEecCCccccccCcCceEEEEeccCCCCCcCEEeCCHHHHHHHcCCcCCCchhHHHHHHHHHhCCCeEEE Q lcl|Aclame:pro 1 MTLLSPGFETKETTLSTTIVQSATGRAALVGKFQWGPAFQIIQVTNEVELVNKFGQPDNNTADYFMSGANFLQYGNDLRV 80 (666) Q Consensus 1 ~~~~~PGVyvee~~~~~~i~~v~tsv~~fvG~~~~Gpv~~p~~i~s~~~~~~~fG~~~~~~~~~~~~~~~f~ngg~~~~v 80 (666) |+|++|||||||+|++..+.+++||++||||+|+|||+|+|++|+||.||++.||++++.+|++|++++||+|||++||| T Consensus 1 ~~~~~PgVyv~e~~~~~~~~~~~ts~~~fvG~~~~Gp~~~p~~i~s~~d~~~~fG~~~~~~~~~~~v~~~f~ngg~~~~v 80 (659) T protein:vir:10 1 MTLLSPGIELKETTVQSTVVNNSTGTAALAGKFQWGPAFQIKQVTNEVDLVNTFGQPTAETADYFMSAMNFLQYGNDLRV 80 (659) T ss_pred CceecCceEEEEecCCceecccCccceEEEecccCCCCCccEEecCHHHHHHHcCCcCCCcchhHHHHHHHhhCCCeEEE Confidence 99999999999998655555668999999999999999999999999999999999999999999999999999999999 Q ss_pred EEcccCcccccccccccccceeeecccccccccccceeeeccccccccccccccccccceeEEeecccccccccccccee Q lcl|Aclame:pro 81 VRVLNKEKAKNATALAGNIEFEITNEGSNYEVGDTIKIKHNRQDIETAGKVTKVDGDGKVKGVFIPTGKIIAHAKAIGVY 160 (666) Q Consensus 81 vRv~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~a~~~~~~ 160 (666) ||+.+.+..+++....++..++...++.....+..+..++....++....+.....++........+..........+.. T Consensus 81 vRv~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~v~~vd~~~~~~~~~i~~~~~~~~~~~~g~~ 160 (659) T protein:vir:10 81 VRAVDRDTAKNSSPIAGNIEYTISTPGSNYAVGDKITVKYVSDAIETEGKITEVDTDGKIKKINIPTAKIIAKAKEVGEY 160 (659) T ss_pred EEccCcccccccccccccceeeEeecccccccccceeeeecCCCccccceeeEEecccccceeeeccccccccccccccc Confidence 99999888877777667777777777666666666667766666666666555555444333333333322222222233 Q ss_pred eecccceeEEEeecccccceeeeeeeeeccceeeeeeccchhhccccceeeeeecccceeeeeeccccccccceeeeeec Q lcl|Aclame:pro 161 PELDGDWTAEFTSSSGNGSAALSVTKIVTDSGLLLTDLETSRANITNQTFLTKLQKYDMPAVSAIYAGEIGNSLEVEILA 240 (666) Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~A~~~g~~gn~i~v~v~~ 240 (666) ..........+..................+...........................+.....+..+|.+++.+++.+.. T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~a~t~~~~~~~~~~~~~~~v~a~~~G~~g~~~tv~~~~ 240 (659) T protein:vir:10 161 PTLGSNWTAEISSSSSGLAAVITLGKIITDSGILLAEIENAEAAMTAVDFQANLKKYGIPGVVALYPGELGDKIEIEIVS 240 (659) T ss_pred ceeeeeeeeeeeeeccccceeeEEeeeecCCceeEEeeccccccccccccccceeecccccccccccceecccceEEEec Confidence 32222222222222222222222222222222222222222222222222223333344556677889999999988766 Q ss_pred cccccccccccccc--cccccccceeeeeeccCcCcccceeeecccccccceeeecccccccccccchhhhHhHhcccCc Q lcl|Aclame:pro 241 RSAFKNTAPDLTMY--PYGGERTAARNLIPYAPQNDNQYAFIVRRDGVVVESYVLSTLKGDKDVYGNSIYMDDFFGRGSS 318 (666) Q Consensus 241 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~et~~ls~~~~~~~~~~~~~~~~~~~~~~~s 318 (666) ...+.......... ............+......++.+.+.+...+.+.+++.++...+.........++...+.+..+ T Consensus 241 ~a~~~~~~~v~v~~~~~~~~~a~~~t~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (659) T protein:vir:10 241 KADYAKGASALLPIYPGGGTRASTAKAVFGYGPQTDSQYAIIVRRNDAIVQSVVLSTKRGEKDIYDSNIYIDDFFAKGGS 320 (659) T ss_pred hhhccccceeeeeeeeecccccccceeeeeeccccccchhhccccccceeeeeeeeccccccccccchhhhhhhhccCcc Confidence 54443222111111 0111122223333344445566677777888888888887777777777777778888888888 Q ss_pred eEEEEeccccccccceeeeecCcccccccccccccccccccchhhhhhhhhcchhhcCccEEecccCCCc-hhHHHHHHH Q lcl|Aclame:pro 319 QYIYATAQGWVDGFSGIISLAGGVSANEATTGGVGADPFIGAMMQGWGLFAERESIHVNLLIAGACAGEG-DAFSTVQKH 397 (666) Q Consensus 319 ~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ll~~p~~~~~~-~~~~~v~~~ 397 (666) .++.+.............++.+|.+..... ..+++...+.++...+..+++||++|+++.+. +...+|+.+ T Consensus 321 ~~v~~~~~~~~~~~~~~~~l~gg~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~il~~p~~~~~~~~~~~~v~~a 392 (659) T protein:vir:10 321 EYIFATAQNWPEGFSGILTLSGGLSSNAEV--------TAGDLMEAWDFFADRESVDVQLFIAGSCAGESLETASTVQKH 392 (659) T ss_pred cEEEEeecccCCCccceeeecccccccccc--------cchhHHHHHHHhhhccccceeEEEecCCCCcchhhhHHHHHH Confidence 888877766666666667777776643221 23445555666666777789999999997654 356789999 Q ss_pred HHHHhhccccEEEEEcCCccccccccccCCHHHHHHHHhhccccchhhcccCcceEEEEcCeEEEecCcCCceeEechHH Q lcl|Aclame:pro 398 AVSIGDERQDCLVMVSPPRSTVVNIPVTTAIDNLIAWREGSGNYNENNMNINTTYAVIDGNYKYQYDKYNDVNRWVPLAA 477 (666) Q Consensus 398 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~p~~~~~d~~~~~~~~~p~s~ 477 (666) |++||+++++||+++|+|....++.+..++.+++++||+..+.......+++|+|+++||||++++|+.+++.+++|||+ T Consensus 393 l~~~~~~~~~~~~~~d~p~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~s~~~~l~~p~~~~~d~~~~~~~~~p~sg 472 (659) T protein:vir:10 393 VVSIGDARQDCLVLCSPPRETVVGIPVTRAVDNLVNWRTAAGSYTDNNFNISSTYAAIDGNYKYQYDKYNDVNRWVPLAA 472 (659) T ss_pred HHHHHHhhCCeEEEEcCccccccCCCcccCHHHHHHHHHhcccccccccccCcceEEEEeCcEEEecccCCceEEechHH Confidence 99999999999999999999999999999999999999999988888899999999999999999999999999999999 Q ss_pred HHHHHHHhhhhcCCceecccceecceeeeeeeeeecCChhHHhhhhhccceEEEEecCCeEEEEcceecCCCccccceee Q lcl|Aclame:pro 478 DIAGLCARTDAVSQPWMSPAGYNRGQIMNVVKLAIEPRKAHRDRLYQAAINPVIGAGGEGFILMGDKTATTVPSPFDRIN 557 (666) Q Consensus 478 ~~ag~~a~~d~~~g~~~span~~~~~i~g~~~~~~~~~~~~~~~Ln~~gIn~i~~~~g~G~~~wG~rT~~~~~~~~~~i~ 557 (666) ++||+|||+|.+|||||||+|+++++|.|+.++++.+++.|++.||++|||||++|+++|+++||+||+++++++|+||| T Consensus 473 ~~AGl~Ar~D~~~g~~~span~~~~~i~g~~~~~~~~~~~~~~~Ln~~gIn~i~~~~~~G~~~wG~rT~~~~~s~~~~i~ 552 (659) T protein:vir:10 473 DIAGLCARTDNVSQTWMSPAGYNRGQILNVIKLAIETRQAQRDRLYQEAINPVTGTGGDGYVLYGDKTATSVPSPFDRIN 552 (659) T ss_pred HHHHHHHHHhccCCceEccCCceeeeeeccccceecCCHhHHHHHhhCCeeEEEEeCCCeEEEEcccccCCCCcccceEe Confidence 99999999999999999999999999999999999999999999999999999999999999999999998888999999 Q ss_pred hhhHHHHHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHhcCCeeeeEEEEcccCCCHHHhhCCEEEEEEEEEec Q lcl|Aclame:pro 558 VRRLFNMLKKNIGDSSKYKLFENNDNFTRASFRMEVSQYLSTIRSLGGIYDFRVQCDTTNNTPDVIDRNEFVASMFIKPA 637 (666) Q Consensus 558 vrR~~~~i~~~~~~~~~~~v~epn~~~~~~~i~~~i~~~l~~l~~~gal~g~~v~~d~~~n~~~~i~~G~~~~~i~~~p~ 637 (666) |||||+||+++|++.++|+||||||+.||++|+++|+.||++||++|+|+||+|+||+++||+++|++|+|+|+|+++|+ T Consensus 553 vrR~~~~i~~si~~~~~~~v~e~n~~~l~~~i~~~i~~fL~~l~~~gal~~~~V~~d~~~nt~~~i~~G~~~~~i~~~p~ 632 (659) T protein:vir:10 553 VRRLFNMLKTNIGRSSKYRLFELNNAFTRSSFRTETAQYLQGIKALGGIYEYRVVCDTTNNTPSVIDRNEFVATFYIQPA 632 (659) T ss_pred hhhHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhcCceeeEEEEEcCCCCCHHHhhCCeEEEEEEEEec Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred CCccEEEEEEEEeecchhHHHHHHHHh Q lcl|Aclame:pro 638 KSINYIMLNFTAVATGSDFDEIIGPVN 664 (666) Q Consensus 638 ~p~e~i~~~~~~~~~~~~~~e~~~~~~ 664 (666) +|+|||+|||+|++++.+|+|++++=- T Consensus 633 ~pae~i~~~~~~~~~~~~~~e~~~~~~ 659 (659) T protein:vir:10 633 RSINYITLNFVATATGADFDELTGLAG 659 (659) T ss_pred CCcceEEEEEEEEecCcchHHhhccCC Confidence 999999999999999999999987644 No 10 >protein:vir:98263 Length: 664 # NCBI annotation: gp18 tail sheath monomer # Family: family:all:661 # MgeID: mge:1667 # MgeName: RB43 # Cross-refs: genbank:acc:YP_239196;genbank:gi:66391671;genbank:GeneID:3416365 Probab=100.00 E-value=2e-157 Score=879.63 Aligned_cols=654 Identities=56% Similarity=0.931 Sum_probs=510.7 Q ss_pred CceecCceEEEEecCCccccccCcCceEEEEeccCCCCCcCEEeCCHHHHHHHcCCcCCCchhHHHHHHHHHhCCCeEEE Q lcl|Aclame:pro 1 MTLLSPGFETKETTLSTTIVQSATGRAALVGKFQWGPAFQIIQVTNEVELVNKFGQPDNNTADYFMSGANFLQYGNDLRV 80 (666) Q Consensus 1 ~~~~~PGVyvee~~~~~~i~~v~tsv~~fvG~~~~Gpv~~p~~i~s~~~~~~~fG~~~~~~~~~~~~~~~f~ngg~~~~v 80 (666) |+|+||||||||+|++++|+||+||++||||+|+|||+|+|++|+||.||++.||+|++.+|++|++++||+|||++||| T Consensus 1 ma~~~PgVyv~E~~~~~~i~~~~ts~~~~vG~~~~Gp~~~p~~i~s~~d~~~~fG~~~~~~~~~~~v~~~f~ngg~~~~v 80 (664) T protein:vir:98 1 MALQSPGIETKETSVQSTVVRNSTGRAAIVGKFSWGPAYQIRQISNEVELVNYFGAPDNLTADYFMSAVNFLQYGNDLRL 80 (664) T ss_pred CceecCceEEEecCCCcccccccccceEEEeeccCCCCCccEEecCHHHHHHhcCCccccchhHHHHHHHHHhcCCeEEE Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred EEcccCcccccccccccccceeeecccccccccccceeeecccccc--ccccccccccccceeEEeeccccccccccccc Q lcl|Aclame:pro 81 VRVLNKEKAKNATALAGNIEFEITNEGSNYEVGDTIKIKHNRQDIE--TAGKVTKVDGDGKVKGVFIPTGKIIAHAKAIG 158 (666) Q Consensus 81 vRv~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~t~~~~~~a~~~~ 158 (666) |||.+.+..++++...+....+....++.+.+++.+.+........ ...+.+..+++..................... T Consensus 81 vRv~~~~~~~~a~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~gn~~~v~i~~~~~~~~~~~~~~~ 160 (664) T protein:vir:98 81 VRVVDKDAAKNASAIFNQIKTTIASQGSNYNVGDVIKVKYSNTVVEENGKVTQVDSNGKILAVTIPKRKKSLLVLNRSVL 160 (664) T ss_pred EEecCccccccccccccccceeeccCCcccccccceeEeecCcccccceeeccCCCCCceeeEeeccCccceeecccccc Confidence 9999988888777777777777777777777888777766554322 23444555554433222221211111111111 Q ss_pred eeeecccceeEEEeecccccceeeeeeeeeccceeeeeeccchhhccccceeeeeecccceeeeeeccccccccceeeee Q lcl|Aclame:pro 159 VYPELDGDWTAEFTSSSGNGSAALSVTKIVTDSGLLLTDLETSRANITNQTFLTKLQKYDMPAVSAIYAGEIGNSLEVEI 238 (666) Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~A~~~g~~gn~i~v~v 238 (666) ...... .....+............+.....+.+........+...+................+.+..+|.|||.+++.+ T Consensus 161 ~~~~~~-~~~~s~~~~s~g~a~a~~v~~v~~d~~~~~~~~~~a~~~i~~~~~~~~~~~~~~~~~~a~~~G~~Gn~isv~i 239 (664) T protein:vir:98 161 TQIFLL-VGTTEIVSQSSGVSASITIDGIESDSGITLLNLDIAKETIQGTSFQTLTQKYQIPSVVALYPGELGSTVQVEI 239 (664) T ss_pred ccccee-cccceeeeeecccceeeecccccccceeeccccceeeeccccccceeeeeccccceeeeeecccccceeeeee Confidence 111000 0011122222222222333333333333333333333333344444444455566778889999999999988 Q ss_pred eccccccccccccccccccccccceeeeeeccCcCcccceeeecccccccceeeecccccccccccchhhhHhHhcccCc Q lcl|Aclame:pro 239 LARSAFKNTAPDLTMYPYGGERTAARNLIPYAPQNDNQYAFIVRRDGVVVESYVLSTLKGDKDVYGNSIYMDDFFGRGSS 318 (666) Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~et~~ls~~~~~~~~~~~~~~~~~~~~~~~s 318 (666) ................................+..++.+.+++..++.+.|++.++...+.+.......+....+.+..+ T Consensus 240 ~s~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (664) T protein:vir:98 240 ISKAAYDTGAMISGYPSGISVKNSGRSVMTYGPQTDNQYAFVVRRGGIVQESFIVSTDKTDKDIYGVNIYMDDFFANGGS 319 (664) T ss_pred cccccccCcceEeeccCceecccceeeeeeccccCccceeEEEecCCceeeeEEeecccCcccceeeeeechhheecccc Confidence 66554433221111111122233344555556667788888999999999999999888888777777777777777777 Q ss_pred eEEEEeccccccccceeeeecCcccccccccccccccccccchhhhhhhhhcchh--hcCccEEecccCCCc-hhHHHHH Q lcl|Aclame:pro 319 QYIYATAQGWVDGFSGIISLAGGVSANEATTGGVGADPFIGAMMQGWGLFAERES--IHVNLLIAGACAGEG-DAFSTVQ 395 (666) Q Consensus 319 ~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~~ll~~p~~~~~~-~~~~~v~ 395 (666) .++................+.++.+. .+..+....++|+.++++. ..++||++|++.+.. +...+++ T Consensus 320 ~~~~~~~~~~~~~~~~~~~~~gg~~~----------~~~~g~~~~~tgl~~l~~~~~~~~~ll~~p~~~~~~~~~~~~v~ 389 (664) T protein:vir:98 320 QYVFGTSMNWPKGFSGILEFGGGLSS----------NDTVGADELMTGWDMFADREALHVPLLIAGGCAGESVEIASTVQ 389 (664) T ss_pred eeeeeecccCCcccceeEeccCcccc----------ccccCchhHHHHHHhhhcccccccceEEecCCCCCcHHHHHHHH Confidence 77666655554444555566655543 2233444556676666544 468999999997654 4556899 Q ss_pred HHHHHHhhccccEEEEEcCCccccccccccCCHHHHHHHHhhccc----cchhhcccCcceEEEEcCeEEEecCcCCcee Q lcl|Aclame:pro 396 KHAVSIGDERQDCLVMVSPPRSTVVNIPVTTAIDNLIAWREGSGN----YNENNMNINTTYAVIDGNYKYQYDKYNDVNR 471 (666) Q Consensus 396 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~s~~~~~~~p~~~~~d~~~~~~~ 471 (666) .+|++||+++++||+++|+|+...++.+..++.+++++||+.... ......+++|+|+++||||++++|+.++..+ T Consensus 390 ~al~~~a~~~~~~~a~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~p~~~~~d~~~~~~~ 469 (664) T protein:vir:98 390 KHVISIGDERQDCTVFVSPPRSLLVNIPLATAVDNIVEWRTGYKISGGTPVDNNLNVSSSYGFLDGNYKYQYDKYNDVNR 469 (664) T ss_pred HHHHHHHHhcCCeEEEEccccceeccCCccccHHHHHHHhhhccccccchhhhhcCCccceEEEEcCeEEEecccCCceE Confidence 999999999999999999999999999999999999999986543 3333457999999999999999999999999 Q ss_pred EechHHHHHHHHHhhhhcCCceecccceecceeeeeeeeeecCChhHHhhhhhccceEEEEecC-CeEEEEcceecCCCc Q lcl|Aclame:pro 472 WVPLAADIAGLCARTDAVSQPWMSPAGYNRGQIMNVVKLAIEPRKAHRDRLYQAAINPVIGAGG-EGFILMGDKTATTVP 550 (666) Q Consensus 472 ~~p~s~~~ag~~a~~d~~~g~~~span~~~~~i~g~~~~~~~~~~~~~~~Ln~~gIn~i~~~~g-~G~~~wG~rT~~~~~ 550 (666) ++|||+++||+|||+|.++||||||+|+++.+|.|+.++++.+++.|++.||++|||||++|++ +|+++||+||+++++ T Consensus 470 ~~p~sg~~AGl~A~~D~~~g~~~span~~~~~i~g~~~~~~~~~~~~~~~Ln~~gIn~i~~~~~~~G~~~wG~rT~~~~~ 549 (664) T protein:vir:98 470 WVPLAGDIAGLCVYTDSVANPWMSPAGYNRGQIRNCIKLAIEPRTAHRDAMYQVQINPVTGFAGGSGFVLYGDKTLTSVP 549 (664) T ss_pred EechHHHHHHHHHHhhhcCCcEECcCCceeeeeeccccceeecChhhHHHHHhCCCeEEEEeeCCCcEEEEcccccCCCC Confidence 9999999999999999999999999999999999999999999999999999999999999997 799999999999888 Q ss_pred cccceeehhhHHHHHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHhcCCeeeeEEEEcccCCCHHHhhCCEEEE Q lcl|Aclame:pro 551 SPFDRINVRRLFNMLKKNIGDSSKYKLFENNDNFTRASFRMEVSQYLSTIRSLGGIYDFRVQCDTTNNTPDVIDRNEFVA 630 (666) Q Consensus 551 ~~~~~i~vrR~~~~i~~~~~~~~~~~v~epn~~~~~~~i~~~i~~~l~~l~~~gal~g~~v~~d~~~n~~~~i~~G~~~~ 630 (666) ++|+|||+||||+||+++|++.++|+||||||+.||++|+++|+.||++||++|+|+||+|+||+++||++||++|+|+| T Consensus 550 s~~~~i~vrR~~~~i~~si~~~~~~~v~epn~~~l~~~i~~~i~~~L~~l~~~gal~g~~V~~d~~~nt~~~i~~G~~~~ 629 (664) T protein:vir:98 550 SPFDRINVRRLFNMIKKDIGDNAKYKLFENNDDFTRASFRMDTGQYMTNIRALGGCYDYRVICDTTNNTPDVIDRNEFVA 629 (664) T ss_pred cccceEeehhHHHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCceeeeEEEEcCCCCCHHHhhCCeEEE Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred EEEEEecCCccEEEEEEEEeecchhHHHHHHHHhc Q lcl|Aclame:pro 631 SMFIKPAKSINYIMLNFTAVATGSDFDEIIGPVNQ 665 (666) Q Consensus 631 ~i~~~p~~p~e~i~~~~~~~~~~~~~~e~~~~~~~ 665 (666) +|+++|.+|+|||+|||+|++++++|+|++++-.- T Consensus 630 ~i~~~p~~pae~I~~~~~q~~~~~~~~e~~~~~~~ 664 (664) T protein:vir:98 630 TVYVKPPRSINYITLNFVATSTGADFDELVGPQAV 664 (664) T ss_pred EEEEEecCCcceEEEEEEEeecCcchhHhcccccC Confidence 99999999999999999999999999999997544 No 11 >protein:vir:7206 Length: 659 # NCBI annotation: gp18 tail sheath protein # Family: family:all:661 # MgeID: mge:142 # MgeName: T4 # Cross-refs: genbank:acc:NP_049780;genbank:gi:9632592;genbank:GeneID:1258597 Probab=100.00 E-value=3.4e-156 Score=872.91 Aligned_cols=656 Identities=63% Similarity=1.065 Sum_probs=504.6 Q ss_pred CceecCceEEEEecCCccccccCcCceEEEEeccCCCCCcCEEeCCHHHHHHHcCCcCCCchhHHHHHHHHHhCCCeEEE Q lcl|Aclame:pro 1 MTLLSPGFETKETTLSTTIVQSATGRAALVGKFQWGPAFQIIQVTNEVELVNKFGQPDNNTADYFMSGANFLQYGNDLRV 80 (666) Q Consensus 1 ~~~~~PGVyvee~~~~~~i~~v~tsv~~fvG~~~~Gpv~~p~~i~s~~~~~~~fG~~~~~~~~~~~~~~~f~ngg~~~~v 80 (666) |+|++|||||||+|++..+.+++|||+||||+|+|||+|+|++|+||.||++.||++++.+|++|++++||+|||++||| T Consensus 1 ~~~~~PgVyvee~~~~~~~~~~~ts~~~fvG~~~~Gp~~~p~~i~s~~~~~~~fG~~~~~~~~~~~~~~~f~ngg~~~~v 80 (659) T protein:vir:72 1 MTLLSPGIELKETTVQSTVVNNSTGTAALAGKFQWGPAFQIKQVTNEVDLVNTFGQPTAETADYFMSAMNFLQYGNDLRV 80 (659) T ss_pred CceecCceEEEEecCCcccccCCCcceEEEeecCCCCCcccEEecCHHHHHHHcCCcCCCCchhHHHHHHHHhCCceEEE Confidence 99999999999998655666779999999999999999999999999999999999999999999999999999999999 Q ss_pred EEcccCcccccccccccccceeeecccccccccccceeeeccccccccccccccccccceeEEeecccccccccccccee Q lcl|Aclame:pro 81 VRVLNKEKAKNATALAGNIEFEITNEGSNYEVGDTIKIKHNRQDIETAGKVTKVDGDGKVKGVFIPTGKIIAHAKAIGVY 160 (666) Q Consensus 81 vRv~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~a~~~~~~ 160 (666) |||.+....++++....++..+....+.....+.....++....++....+.....++........+............. T Consensus 81 vRv~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~v~~~~~~~~~~~~~v~t~~~~a~~~~~~~~ 160 (659) T protein:vir:72 81 VRAVDRDTAKNSSPIAGNIDYTISTPGSNYAVGDKITVKYVSDDIETEGKITEVDADGKIKKINIPTGKNYAKAKEVGEY 160 (659) T ss_pred EEccCCcccccccccccccceeecccccccccceeeeeeeccccccccceEEEeeccccceeeeeccccccccccccccc Confidence 99998877777766666666666666555555555555554444444334444443333333333322222222222222 Q ss_pred eecccceeEEEeecccccceeeeeeeeeccceeeeeeccchhhccccceeeeeecccceeeeeeccccccccceeeeeec Q lcl|Aclame:pro 161 PELDGDWTAEFTSSSGNGSAALSVTKIVTDSGLLLTDLETSRANITNQTFLTKLQKYDMPAVSAIYAGEIGNSLEVEILA 240 (666) Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~A~~~g~~gn~i~v~v~~ 240 (666) ..........+..................+.................................+..++.+++.+++++.. T Consensus 161 ~~~~~~~~~~~~~~~~~~a~~~~~v~v~~~~~~~~~~v~~~~~a~~~~~~~~~v~~~~~~~~~a~~~gt~g~~~tv~i~~ 240 (659) T protein:vir:72 161 PTLGSNWTAEISSSSSGLAAVITLGKIITDSGILLAEIENAEAAMTAVDFQANLKKYGIPGVVALYPGELGDKIEIEIVS 240 (659) T ss_pred cccccceeeEEeeccccccceEEEEEeecCcceeeeeccccchhhhcccccccccccccceeeeccccccccceeEEEcc Confidence 22222222233222222222222222222222222222222222222222222233344556777888999999888765 Q ss_pred ccccccccccccc-cc-ccccccceeeeeeccCcCcccceeeecccccccceeeecccccccccccchhhhHhHhcccCc Q lcl|Aclame:pro 241 RSAFKNTAPDLTM-YP-YGGERTAARNLIPYAPQNDNQYAFIVRRDGVVVESYVLSTLKGDKDVYGNSIYMDDFFGRGSS 318 (666) Q Consensus 241 ~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~et~~ls~~~~~~~~~~~~~~~~~~~~~~~s 318 (666) ............. .. ...................+.+.+.+...+...+.+.++...+.........++...+.+.++ T Consensus 241 ~~~~~~~~~~~v~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (659) T protein:vir:72 241 KADYAKGASALLPIYPGGGTRASTAKAVFGYGPQTDSQYAIIVRRNDAIVQSVVLSTKRGEKDIYDSNIYIDDFFAKGGS 320 (659) T ss_pred ccccccceeeeeecccccccccccceeeeeeecccccccceeeecccceeeeeeeeeccccccccchhhhhhhhhhcCCc Confidence 5443322211111 11 111122222333334445566677777888888888888777777777788888888888888 Q ss_pred eEEEEeccccccccceeeeecCcccccccccccccccccccchhhhhhhhhcchhhcCccEEecccCCCc-hhHHHHHHH Q lcl|Aclame:pro 319 QYIYATAQGWVDGFSGIISLAGGVSANEATTGGVGADPFIGAMMQGWGLFAERESIHVNLLIAGACAGEG-DAFSTVQKH 397 (666) Q Consensus 319 ~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ll~~p~~~~~~-~~~~~v~~~ 397 (666) .++.+.............++.+|.+..... ..+++...+..+...+..+++||++|++.+.. +....++++ T Consensus 321 ~~v~~~~~~~~~~~~~~~~l~gg~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~l~~p~~~~~~~~~~~~v~~~ 392 (659) T protein:vir:72 321 EYIFATAQNWPEGFSGILTLSGGLSSNAEV--------TAGDLMEAWDFFADRESVDVQLFIAGSCAGESLETASTVQKH 392 (659) T ss_pred eEEEEEecccCCcccccccccccccccccc--------cchhHHHHHHHhhhccccceeEEEecCCCCcchhhhHHHHHH Confidence 888877666665556666777766543221 12344455566666677789999999998654 345789999 Q ss_pred HHHHhhccccEEEEEcCCccccccccccCCHHHHHHHHhhccccchhhcccCcceEEEEcCeEEEecCcCCceeEechHH Q lcl|Aclame:pro 398 AVSIGDERQDCLVMVSPPRSTVVNIPVTTAIDNLIAWREGSGNYNENNMNINTTYAVIDGNYKYQYDKYNDVNRWVPLAA 477 (666) Q Consensus 398 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~p~~~~~d~~~~~~~~~p~s~ 477 (666) |++||+++++||+++|+|+...++.+..++.+++++||+.++.......+++|+|+++||||++++|+.+++.+++|||+ T Consensus 393 l~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~s~~~~~~~p~~~~~d~~~~~~~~~p~sg 472 (659) T protein:vir:72 393 VVSIGDARQDCLVLCSPPRETVVGIPVTRAVDNLVNWRTAAGSYTDNNFNISSTYAAIDGNHKYQYDKYNDVNRWVPLAA 472 (659) T ss_pred HHHHHhhhCCEEEEEcCccccccCCCcccCHHHHHHHHhhccccccccccccceeEEEEcCceeeccccCCceEEechHH Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred HHHHHHHhhhhcCCceecccceecceeeeeeeeeecCChhHHhhhhhccceEEEEecCCeEEEEcceecCCCccccceee Q lcl|Aclame:pro 478 DIAGLCARTDAVSQPWMSPAGYNRGQIMNVVKLAIEPRKAHRDRLYQAAINPVIGAGGEGFILMGDKTATTVPSPFDRIN 557 (666) Q Consensus 478 ~~ag~~a~~d~~~g~~~span~~~~~i~g~~~~~~~~~~~~~~~Ln~~gIn~i~~~~g~G~~~wG~rT~~~~~~~~~~i~ 557 (666) ++||+|||+|.++||||||+|+++++|.|+.++++.+++.|++.||++|||||++|+++|+++||+||+++++++|+||| T Consensus 473 ~vAGl~Ar~D~~~G~~~span~~~~~i~g~~~~~~~~~~~~~~~Ln~~gIn~i~~~~g~G~~~wG~rT~~~~~s~~~~i~ 552 (659) T protein:vir:72 473 DIAGLCARTDNVSQTWMSPAGYNRGQILNVIKLAIETRQAQRDRLYQEAINPVTGTGGDGYVLYGDKTATSVPSPFDRIN 552 (659) T ss_pred HHHHHHHHhhccCCcEEccCCeeeceeeccccccccCChhHHHHHhhCCceEEEEecCCeEEEEcccccCCCCcccceEe Confidence 99999999999999999999999999999999999999999999999999999999999999999999998888999999 Q ss_pred hhhHHHHHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHhcCCeeeeEEEEcccCCCHHHhhCCEEEEEEEEEec Q lcl|Aclame:pro 558 VRRLFNMLKKNIGDSSKYKLFENNDNFTRASFRMEVSQYLSTIRSLGGIYDFRVQCDTTNNTPDVIDRNEFVASMFIKPA 637 (666) Q Consensus 558 vrR~~~~i~~~~~~~~~~~v~epn~~~~~~~i~~~i~~~l~~l~~~gal~g~~v~~d~~~n~~~~i~~G~~~~~i~~~p~ 637 (666) |||||+||+++|++.++|+||||||+.||++|+++|+.||++||++|+|+||+|+||+++||++||++|+|+|+|+|+|+ T Consensus 553 vrR~~~~i~~si~~~~~~~v~e~n~~~l~~~i~~~i~~fL~~l~~~gal~~~~V~~d~~~nt~~~i~~G~~~~~i~~~p~ 632 (659) T protein:vir:72 553 VRRLFNMLKTNIGRSSKYRLFELNNAFTRSSFRTETAQYLQGNKALGGIYEYRVVCDTTNNTPSVIDRNEFVATFYIQPA 632 (659) T ss_pred ehhHHHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCceeeEEEEEcCCCCCHHHhhCCeEEEEEEEEec Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred CCccEEEEEEEEeecchhHHHHHHHHh Q lcl|Aclame:pro 638 KSINYIMLNFTAVATGSDFDEIIGPVN 664 (666) Q Consensus 638 ~p~e~i~~~~~~~~~~~~~~e~~~~~~ 664 (666) +|+|||+|||+|++++++|+|+++.-- T Consensus 633 ~pae~I~~~~~~~~~~~~~~e~~~~~~ 659 (659) T protein:vir:72 633 RSINYITLNFVATATGADFDELTGLAG 659 (659) T ss_pred CCccEEEEEEEEeecCcchHHhcccCC Confidence 999999999999999999999998755 No 12 >protein:vir:5663 Length: 671 # NCBI annotation: tail sheath protein # Family: family:all:661 # MgeID: mge:119 # MgeName: KVP40 # Cross-refs: genbank:acc:NP_899602;genbank:gi:34419589;genbank:GeneID:2545776 Probab=100.00 E-value=4.3e-146 Score=817.55 Aligned_cols=641 Identities=50% Similarity=0.810 Sum_probs=445.9 Q ss_pred CceecCceEEEEecCCccccccCcCceEEEEeccCCCCCcCEEeCCHHHHHHHcCCcCCCchhHHHHHHHHHhCCCeEEE Q lcl|Aclame:pro 1 MTLLSPGFETKETTLSTTIVQSATGRAALVGKFQWGPAFQIIQVTNEVELVNKFGQPDNNTADYFMSGANFLQYGNDLRV 80 (666) Q Consensus 1 ~~~~~PGVyvee~~~~~~i~~v~tsv~~fvG~~~~Gpv~~p~~i~s~~~~~~~fG~~~~~~~~~~~~~~~f~ngg~~~~v 80 (666) |+|++|||||||+|++++|+||+||++||||+|+|||+|+|++|+||.||++.||++++.+|++|++++||+|||++||| T Consensus 1 ~~~~~Pgvyv~e~~~~~~i~~v~t~~~~fvG~~~~Gp~~~p~~v~s~~~~~~~fG~~~~~~~~~~~v~~~f~ngg~~~~v 80 (671) T protein:vir:56 1 MTLLSPGIENKEINLASAIGRAATGRAAMVGKFEWGPAYSITQVTSESDLVTIFGRPNDYTAASFMTANNFLKYGNDLRL 80 (671) T ss_pred CceecCceEEEeecCcccccccCcccceEEecccCCCCccCEEcCCHHHHHHHcCCcCCCcchhHHHHHHHHhcCCeEEE Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred EEcccCcccccccccccccceeeecccccccccccceeeecccc-ccccccccccccc--cceeEEeecccccccccccc Q lcl|Aclame:pro 81 VRVLNKEKAKNATALAGNIEFEITNEGSNYEVGDTIKIKHNRQD-IETAGKVTKVDGD--GKVKGVFIPTGKIIAHAKAI 157 (666) Q Consensus 81 vRv~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~--~~~~~~~~~t~~~~~~a~~~ 157 (666) ||+.+++..++++........+. ..+..+.+++.+.+...... +....++...... .................... T Consensus 81 vrv~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~v~~~~~~ 159 (671) T protein:vir:56 81 VRICDATTAQNATPLYNAVEYTI-GASNGCVVGDDITITYSGVGALTAKGKVLEVDAGNNNAASKIFLPSAEIVAAAKSD 159 (671) T ss_pred EEecCccccccchhhcccccccc-ccCcceeeceeeeeecCcccccccCcceeEEeeeccceeeeeeccceeEEEeeecc Confidence 99999887776655443333322 22334444554444333211 1111222111111 11111111111111111111 Q ss_pred ceeeecccceeEEEeecccccceeeeeeeeecccee-ee-------eeccchhhccccceeeeeecccceeeeeeccccc Q lcl|Aclame:pro 158 GVYPELDGDWTAEFTSSSGNGSAALSVTKIVTDSGL-LL-------TDLETSRANITNQTFLTKLQKYDMPAVSAIYAGE 229 (666) Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~-~~-------~~~~~a~~~~~~~~~~~~~~~~~~~~~~A~~~g~ 229 (666) .....+... ...+.......... .....+. .. ........................+.+.+...+. T Consensus 160 ~~~~~~~~~-----t~~~~~~~~~v~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~g~ 233 (671) T protein:vir:56 160 GNYPSVGTI-----TLQPTQGDIALTNI-EIIDTGSVYFPNIELAFDALTAIETEGGALKYADLIEKQGFPRLSARYVGD 233 (671) T ss_pred ccccccccc-----cccccccceeeeee-cccccceEEEeccccccccccccccccccccchhhhhcccccccccccccc Confidence 111100000 00000000000000 0000000 00 0000000000111111112222334566777888 Q ss_pred cccceeeeeeccccccc-ccccccccccccccc----------ceeeeeeccCcCcccceeeecccccccceeeeccccc Q lcl|Aclame:pro 230 IGNSLEVEILARSAFKN-TAPDLTMYPYGGERT----------AARNLIPYAPQNDNQYAFIVRRDGVVVESYVLSTLKG 298 (666) Q Consensus 230 ~gn~i~v~v~~~~~~~~-~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~v~~~g~~~et~~ls~~~~ 298 (666) |++.+.+.+........ .............+. .............+.+.+.+..+|.+.|++.++...+ T Consensus 234 ~g~~~~v~v~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~ 313 (671) T protein:vir:56 234 FGDAISVEIINYADYQTAFAFAAGHTLGDIELPIYPDGGTRSINLSSYFTFGPSNSNQYAVIVRVSGEVEEAFIVSTNPG 313 (671) T ss_pred cCcceEEEEecccccccccccccceeeeeccccccccccccccccceeecccccccccceeEEeecCccceeEEEeeccc Confidence 99988887654322221 111111111111111 1111122223344556667777888888888887777 Q ss_pred ccccccchhhhHhHhcccCceEEEEeccccccccceeeeecCcccccccccccccccccccchhhhhhhhhcc--hhhcC Q lcl|Aclame:pro 299 DKDVYGNSIYMDDFFGRGSSQYIYATAQGWVDGFSGIISLAGGVSANEATTGGVGADPFIGAMMQGWGLFAER--ESIHV 376 (666) Q Consensus 299 ~~~~~~~~~~~~~~~~~~~s~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~ 376 (666) .........+......+..+.++....... ........+.++.+.. .+......++.++. +...+ T Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~gg~d~~------------~~~~~~~~~~~~~~~~~~~~~ 380 (671) T protein:vir:56 314 DKDVNGQSIFIDEYFENSGSAYITAIAEGW-KTESGAYNFGGGSDAN------------AGADDWMFGLDMLSDPEVLYT 380 (671) T ss_pred ccccchhhhhhhhhhcccCceEEEecCccc-CCccccccccCccccc------------cchhHHHHHHHhhhhccccce Confidence 666666665555555555554443332222 2222233444443321 11112223333333 33457 Q ss_pred ccEEecccCCCchh-HH-HHHHHHHHHhhccccEEEEEcCCccccccccccCCHHHHHHHHhhccccch----hhcccCc Q lcl|Aclame:pro 377 NLLIAGACAGEGDA-FS-TVQKHAVSIGDERQDCLVMVSPPRSTVVNIPVTTAIDNLIAWREGSGNYNE----NNMNINT 450 (666) Q Consensus 377 ~ll~~p~~~~~~~~-~~-~v~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~s 450 (666) +++++|+....... .. ..+.++..+|+.+++|++++|+|+...++.+...+.+++.+|++.....+. ...+++| T Consensus 381 ~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s 460 (671) T protein:vir:56 381 NLVIAGNAAAEEVSIASTVQKYAIDSVGNVRQDCVVFVSPPQSLIVNKQAGTAVANIQGWRTGIDPTNGQAVVDNLNVST 460 (671) T ss_pred eEEEcCCCCCccchhHHHHHHHHHHHHHhhcCCEEEEEeccccccccccccccHHHHHHHhhhccccchhhhhhhccCCc Confidence 88999887664432 22 334456667778899999999999999999999999999999987665443 3457899 Q ss_pred ceEEEEcCeEEEecCcCCceeEechHHHHHHHHHhhhhcCCceecccceecceeeeeeeeeecCChhHHhhhhhccceEE Q lcl|Aclame:pro 451 TYAVIDGNYKYQYDKYNDVNRWVPLAADIAGLCARTDAVSQPWMSPAGYNRGQIMNVVKLAIEPRKAHRDRLYQAAINPV 530 (666) Q Consensus 451 ~~~~~~~p~~~~~d~~~~~~~~~p~s~~~ag~~a~~d~~~g~~~span~~~~~i~g~~~~~~~~~~~~~~~Ln~~gIn~i 530 (666) +|+++||||++++|+.++..+++|||+++||+|||+|.++||||||||+++++|.|+.++++.+++.|++.||++||||| T Consensus 461 ~~~~~~~p~~~~~d~~~~~~~~~p~s~~~AGl~Ar~D~~~g~~~span~~~~~i~g~~~~~~~~~~~~~~~Ln~~gIn~i 540 (671) T protein:vir:56 461 TYAVIDGNYKYQYDKYNDRNRWVPLAGDIAGLCAYTDQVSQPWMSPAGFNRGQIKGVNRLAVDLRRAHRDALYQIGINPV 540 (671) T ss_pred ceEEEecCceEEecccCCceeEechHHHHHHHHHHhhccCCcEECcCCceeccccccccceeecChhHHHHHhhCCceEE Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred EEecCCeEEEEcceecCCCccccceeehhhHHHHHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHhcCCeeeeE Q lcl|Aclame:pro 531 IGAGGEGFILMGDKTATTVPSPFDRINVRRLFNMLKKNIGDSSKYKLFENNDNFTRASFRMEVSQYLSTIRSLGGIYDFR 610 (666) Q Consensus 531 ~~~~g~G~~~wG~rT~~~~~~~~~~i~vrR~~~~i~~~~~~~~~~~v~epn~~~~~~~i~~~i~~~l~~l~~~gal~g~~ 610 (666) ++|+++|+++||+||+++++++|+||+|||||+||+++|++.++|+||||||+.||++|+++|+.||++||++|+|+||+ T Consensus 541 ~~~~~~G~~~wG~rT~~~~~~~~~~i~vrR~~~~i~~si~~~~~~~v~epn~~~~~~~i~~~i~~fL~~l~~~gal~g~~ 620 (671) T protein:vir:56 541 VGFAGQGFVLYGDKTATQQASAFDRINVRRLFNLLKKAISDAAKYRLFELNDEFTRSSFKSEIDAYLTNIQDLGGVYDFR 620 (671) T ss_pred EEecCCeEEEEcceecCCCCcccceEehhhHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeE Confidence 99999999999999999888899999999999999999999999999999999999999999999999999999999999 Q ss_pred EEEcccCCCHHHhhCCEEEEEEEEEecCCccEEEEEEEEeecchhHHHHHH Q lcl|Aclame:pro 611 VQCDTTNNTPDVIDRNEFVASMFIKPAKSINYIMLNFTAVATGSDFDEIIG 661 (666) Q Consensus 611 v~~d~~~n~~~~i~~G~~~~~i~~~p~~p~e~i~~~~~~~~~~~~~~e~~~ 661 (666) |+||+++||++||++|+|+++|+++|.+|+|||+|||+|++++++|+|+++ T Consensus 621 v~~d~~~nt~~~i~~G~~~~~i~~~p~~Pae~I~~~~~~~~~~~~f~e~~~ 671 (671) T protein:vir:56 621 VVCDETNNPGSVIDRNEFVASIYVKPAKSINFITLNFVATSTDADFAEIIG 671 (671) T ss_pred EEEcCCCCCHHHhhCCeEEEEEEEEecCCcceEEEEEEEeecCcchhhhcC Confidence 999999999999999999999999999999999999999999999999999 No 13 >protein:vir:104477 Length: 749 # NCBI annotation: gp18 # Family: family:all:661 # MgeID: mge:1548 # MgeName: P-SSM4 # Cross-refs: genbank:acc:YP_214663;genbank:gi:61806304;genbank:GeneID:3294532 Probab=100.00 E-value=3.6e-141 Score=790.55 Aligned_cols=641 Identities=29% Similarity=0.450 Sum_probs=415.0 Q ss_pred Cc--eecCceEEEEecCCccccccCcCceEEEEeccCCCCCcCEEeCCHHHHHHHcCCcCCCchhHHHHHHHHHhCCCeE Q lcl|Aclame:pro 1 MT--LLSPGFETKETTLSTTIVQSATGRAALVGKFQWGPAFQIIQVTNEVELVNKFGQPDNNTADYFMSGANFLQYGNDL 78 (666) Q Consensus 1 ~~--~~~PGVyvee~~~~~~i~~v~tsv~~fvG~~~~Gpv~~p~~i~s~~~~~~~fG~~~~~~~~~~~~~~~f~ngg~~~ 78 (666) |+ |++|||||||+|.+++|.+++||++||||.|+|||+++|++|+||.||++.||+|++.+|++|++++||+|||++| T Consensus 1 M~~~~~~PgVyv~e~~~~~~~~~~~t~~~~fvG~~~~Gp~~~p~~v~s~~~~~~~fG~~~~~~~~~~~v~~~F~ngg~~~ 80 (749) T protein:vir:10 1 MATNQSSPGVVIQERDLTTVSTIPTANVGVIAAPFTKGPVEEVIEITSERQLAEKFGEPNESNYEYWFSAAQFLSYGGLL 80 (749) T ss_pred CCccccCCeeEEEEecCCcccccccCceeEEEeccCCCCCccCEEcCCHHHHHHHcCCccCCcccHHHHHHHHhhcCCeE Confidence 87 8999999999998889999999999999999999999999999999999999999999999999999999999999 Q ss_pred EEEEcccCcccccccccccccc----------------eeeecccccccccccceeeecccccccccc-ccccccccc-e Q lcl|Aclame:pro 79 RVVRVLNKEKAKNATALAGNIE----------------FEITNEGSNYEVGDTIKIKHNRQDIETAGK-VTKVDGDGK-V 140 (666) Q Consensus 79 ~vvRv~~~~~~~~a~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~ 140 (666) ||||+.+....++ +...+... .....+..++.+++.+.+.+.......... ......+.. . T Consensus 81 ~vvRv~~~~~~~a-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~pG~~gn~l~v~v~~~~~~~~~~~~~~~~~~~~~~ 159 (749) T protein:vir:10 81 KTIRVNSSSLKNA-VDTGTAPLVKNLQDYETSIEDASNNFSWVARTPGDTGNSIGIFVTDAGADQVVVVPAPGSGNEHEF 159 (749) T ss_pred EEEEccCcccccc-ccccccccccccccccccccccccceEEEeccCCCcCCceEEEEEcCCCceeeeeecCCccceeeE Confidence 9999976543322 21111110 011222344556665555443211000000 000000000 0 Q ss_pred eEEeecc-cccc-ccccccceee---eccc---------------------------ceeEEEeecccccceeeeeeeee Q lcl|Aclame:pro 141 KGVFIPT-GKII-AHAKAIGVYP---ELDG---------------------------DWTAEFTSSSGNGSAALSVTKIV 188 (666) Q Consensus 141 ~~~~~~t-~~~~-~~a~~~~~~~---~~~~---------------------------~~~~~~~~~~~~~~~a~~~~~~~ 188 (666) ....... .... ......+... .... .....+................. T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~a~~~~~~~~~~~~~~~~~~s~~~~~~~a~~~~v 239 (749) T protein:vir:10 160 VADAAVSAASGAAGKVFKYSIILTIDDVVGTFAPGSATTITIGGSAESVNVLAYDATNKKLEIGLPSGGVTGILADNQVI 239 (749) T ss_pred EeeecccccccccccccccceeeeeccccceeecccceeeeccCcccccccccccCCcceEEEeeecccccceeeeeecc Confidence 0000000 0000 0000000000 0000 00000000000000000000000 Q ss_pred ccceeeeeeccchhhccccceeeeeecccceeeeeeccccccccceeeeeeccccccccccccccc---cccccccceee Q lcl|Aclame:pro 189 TDSGLLLTDLETSRANITNQTFLTKLQKYDMPAVSAIYAGEIGNSLEVEILARSAFKNTAPDLTMY---PYGGERTAARN 265 (666) Q Consensus 189 ~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~A~~~g~~gn~i~v~v~~~~~~~~~~~~~~~~---~~~~~~~~~~~ 265 (666) ......... ..........................+..+..+.+... ............. .....+..... T Consensus 240 ~~~~~~~~~----~~~i~~~~~~~~~~~~~~~a~~~~~~~~~g~~~~it~v--~~~~~~~~~~t~~~~~~~a~~~gt~~~ 313 (749) T protein:vir:10 240 TQGTNTAKI----NVTIERKLLVALNKSSIEFAASDVVQDTNSTNITITSV--RDEYTEREYLPGVKWINVAPRPGTSLY 313 (749) T ss_pred ccccccccc----ccccccchhhhhccccceeeccccccCCccceeEEEee--eccccccccccceeeccccccccceee Confidence 000000000 00000000000000000011111122222333322221 1111111111111 11111112122 Q ss_pred eeeccCcCcccceeeeccc-------ccccceee-ecccccccccccchhhhHhHhcccCceEEEEeccccccccc---- Q lcl|Aclame:pro 266 LIPYAPQNDNQYAFIVRRD-------GVVVESYV-LSTLKGDKDVYGNSIYMDDFFGRGSSQYIYATAQGWVDGFS---- 333 (666) Q Consensus 266 ~~~~~~~~~~~~~~~v~~~-------g~~~et~~-ls~~~~~~~~~~~~~~~~~~~~~~~s~~i~~~~~~~~~~~~---- 333 (666) ........+..+..+...+ |.++|++. ++...+.+...+...++..+++.. +.++.+.......... T Consensus 314 ~~~~~g~~D~~~v~v~~~~g~~~~~~g~v~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~-s~~v~~~~~~~~~~~~~~~~ 392 (749) T protein:vir:10 314 ANGVGGHRDEMHVILVDIDGGVTGTVGALLERYIDVSKASDAKTSVGETNYYAEVIKQK-SEFIYWAEHESTLYAATSSA 392 (749) T ss_pred eecccCCCCceEEEEecCCCeeeecccceeeeeeeccccccccccccccchhhhhhccC-CCEEEEEecccccccccccc Confidence 2222233333344343333 45667776 455667777777777888777654 4444332221100000 Q ss_pred ----------------------------------------eeeeecCcccccccccccccccccccchhhhhhhhhcchh Q lcl|Aclame:pro 334 ----------------------------------------GIISLAGGVSANEATTGGVGADPFIGAMMQGWGLFAERES 373 (666) Q Consensus 334 ----------------------------------------~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 373 (666) ..+.+.++.+.... .........++.+.+.++...+. T Consensus 393 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gg~d~~~~---~~~~~~~~~~~~~~~~~l~~~~~ 469 (749) T protein:vir:10 393 SDGLFGQTAANRQFNLFRSAAGSVDYPAGVTTLGSKNNATYYYRLSGGVNYTVS---AGQYTITNTDIGSAYELIGDPES 469 (749) T ss_pred cccccccccccceeeccccccccceeccccccccccCCcEEEEEccCCcccccc---cccccccchhHHHHHHHhhhhhh Confidence 00112222221111 01112233456666777777777 Q ss_pred hcCccEEecccCCCchhHHHHHHHHHHHhhccccEEEEEcCCccccccccc-cCCHHHHHHHHhhccccchhhcccCcce Q lcl|Aclame:pro 374 IHVNLLIAGACAGEGDAFSTVQKHAVSIGDERQDCLVMVSPPRSTVVNIPV-TTAIDNLIAWREGSGNYNENNMNINTTY 452 (666) Q Consensus 374 ~~~~ll~~p~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~s~~ 452 (666) ..+++++++.......+..+++++|+++|+++++||+++|+|+....+... .....++..|++. +++|+| T Consensus 470 ~~~~~li~~~~~~~~~~~~~v~~al~~~~~~~~~~~~~~d~p~~~~~~~~~~~~~~~~~~~~~~~---------~~~s~~ 540 (749) T protein:vir:10 470 QIVDFIISGPSGTSDANALAKITSLVNIAEERRDCMVFVSPRRGNVIGISNTTTITTNIVDFFKK---------LPSSSY 540 (749) T ss_pred cccceEEEecCCCCcchhHHHHHHHHHHHhhcCCEEEEEcCCCCcccccccchhhhhHHHHHHhh---------ccCcee Confidence 788888876655555677889999999999999999999999876554333 3334556666654 467899 Q ss_pred EEEEcCeEEEecCcCCceeEechHHHHHHHHHhhhhcCCceecccceecceeeeeeeeeecCChhHHhhhhhccceEEEE Q lcl|Aclame:pro 453 AVIDGNYKYQYDKYNDVNRWVPLAADIAGLCARTDAVSQPWMSPAGYNRGQIMNVVKLAIEPRKAHRDRLYQAAINPVIG 532 (666) Q Consensus 453 ~~~~~p~~~~~d~~~~~~~~~p~s~~~ag~~a~~d~~~g~~~span~~~~~i~g~~~~~~~~~~~~~~~Ln~~gIn~i~~ 532 (666) +++||||++++|+.++..+++|||+|+||+|||+|.++||||||||+++.+|+|+.++++.+++.|++.||++|||||++ T Consensus 541 ~~~~~p~~~~~d~~~~~~~~~p~s~~vAGl~Ar~D~~~g~~~SPan~~~~~i~g~~~~~~~~~~~e~~~Ln~~gIn~i~~ 620 (749) T protein:vir:10 541 MVFDSGYKYIYDKYNDVYRYIPCNGDTAGLCLQTNEISEPWFSPAGFQRGVLRNAIKLAYTPNKAQRDQLYANRVNPIVS 620 (749) T ss_pred EEEEccceeeeccccCceEEechHHHHHHHHHHhhccCCcEECcCCceeeeeeccccceeecChhHHHhhhhCCceEEEE Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred ecCCeEEEEcceecCCCccccceeehhhHHHHHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHhcCCeeeeEEE Q lcl|Aclame:pro 533 AGGEGFILMGDKTATTVPSPFDRINVRRLFNMLKKNIGDSSKYKLFENNDNFTRASFRMEVSQYLSTIRSLGGIYDFRVQ 612 (666) Q Consensus 533 ~~g~G~~~wG~rT~~~~~~~~~~i~vrR~~~~i~~~~~~~~~~~v~epn~~~~~~~i~~~i~~~l~~l~~~gal~g~~v~ 612 (666) |+++|+++||+||+.+.+++|+||||||||+|||++|++.++|+||||||+.||++|+++|+.||++||++|+|.||+|+ T Consensus 621 ~~g~G~~~wG~rT~~s~d~~~~~i~vRRl~~~ie~si~~~~~~~v~epn~~~l~~~i~~~i~~fL~~l~~~G~i~~f~V~ 700 (749) T protein:vir:10 621 FPGQGVVLYGDKTALGFASAFDRINIRRLFLTVERVISTAAKAQLFEQNDEAQRSLFINIVEPYLRDVQGRRGVVDFLVK 700 (749) T ss_pred ecCCeEEEEcceecCCCCcccceeehhhhHHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCeeeeEEE Confidence 99999999999999777789999999999999999999999999999999999999999999999999999999999999 Q ss_pred EcccCCCHHHhhCCEEEEEEEEEecCCccEEEEEEEEeecchhHHHHHH Q lcl|Aclame:pro 613 CDTTNNTPDVIDRNEFVASMFIKPAKSINYIMLNFTAVATGSDFDEIIG 661 (666) Q Consensus 613 ~d~~~n~~~~i~~G~~~~~i~~~p~~p~e~i~~~~~~~~~~~~~~e~~~ 661 (666) ||+++||+++|++|+|+++|+++|++|+|||+|||+|++++.+|+|+++ T Consensus 701 ~d~~~Nt~~~i~~G~~~~~i~~~P~~pae~I~~~~~~~~~~~~~~e~~s 749 (749) T protein:vir:10 701 CDSTNNTPEAVDRGEFYAEVFLKPTRTINYVQLTFVATRTGVSFAEVAS 749 (749) T ss_pred EcCCCCCHHHhhCCEEEEEEEEEecCCccEEEEEEEEeecCcchHHHhC Confidence 9999999999999999999999999999999999999999999999999 No 14 >protein:vir:106984 Length: 743 # NCBI annotation: contractile sheath protein gp18 # Family: family:all:661 # MgeID: mge:1459 # MgeName: S-PM2 # Cross-refs: genbank:acc:YP_195136;genbank:gi:58532913;uniprot:Q5GQN6;genbank:GeneID:3260481 Probab=100.00 E-value=1.7e-140 Score=786.80 Aligned_cols=632 Identities=30% Similarity=0.475 Sum_probs=403.3 Q ss_pred Cc-eecCceEEEEec-CCccccccCcCceEEEEeccCCCCCcCEEeCCHHHHHHHcCCcCCCchhHHHHHHHHHhCCCeE Q lcl|Aclame:pro 1 MT-LLSPGFETKETT-LSTTIVQSATGRAALVGKFQWGPAFQIIQVTNEVELVNKFGQPDNNTADYFMSGANFLQYGNDL 78 (666) Q Consensus 1 ~~-~~~PGVyvee~~-~~~~i~~v~tsv~~fvG~~~~Gpv~~p~~i~s~~~~~~~fG~~~~~~~~~~~~~~~f~ngg~~~ 78 (666) |. |++|||||||++ ++++|++|+|+++||||+|+|||+|+|++|+||.||++.||++++.+|++|++++||+|||++| T Consensus 1 m~~~~~Pgvyv~e~~~~~~~i~~~~t~~~~~vg~~~~Gp~~~p~~i~s~~~~~~~fG~~~~~~~~~~~v~~~f~ngg~~~ 80 (743) T protein:vir:10 1 MASQVSPGILIKERDLTNAVVTGALQIRAAHASTFAKGPIGDIVNINTQKELVSVFGEPKEDNAEDWMVASEFLNYGGRL 80 (743) T ss_pred CccccCCceEEEEecCCCceeccCCcceeEEEEeccCCCCCcCEEecCHHHHHHHcCCccCCcchHHHHHHHHHhCCceE Confidence 87 899999999997 6789999999999999999999999999999999999999999999999999999999999999 Q ss_pred EEEEcccCccccccccccc------------ccceeeecccccccccccceeeeccccccccccccccccccc-eeEEee Q lcl|Aclame:pro 79 RVVRVLNKEKAKNATALAG------------NIEFEITNEGSNYEVGDTIKIKHNRQDIETAGKVTKVDGDGK-VKGVFI 145 (666) Q Consensus 79 ~vvRv~~~~~~~~a~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 145 (666) ||||+.+....+++..... ........+..++.+++.+++.+................... ...... T Consensus 81 ~vvrv~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~G~~gN~i~V~v~~~~~d~~~~~~~~~~~~~~~~~~~~ 160 (743) T protein:vir:10 81 AVVRAETTGVLNATTGSAGVLVKNRESWDAGSGNGEVFVARTAGSWGNSLMGVLVDRGADYIVTFAATPTDTAVGTQLLF 160 (743) T ss_pred EEEEccCccccccccccccccccccccccccccceeEEEEeeccccccceEEEEecCCCcceeeeeccccccccceeeee Confidence 9999987654443322111 111122223344455655555443211100000000000000 000000 Q ss_pred ccccccccccccceeeecc--------cc-eeEEEeeccccc-------------------ceeeeeeeeeccceeeeee Q lcl|Aclame:pro 146 PTGKIIAHAKAIGVYPELD--------GD-WTAEFTSSSGNG-------------------SAALSVTKIVTDSGLLLTD 197 (666) Q Consensus 146 ~t~~~~~~a~~~~~~~~~~--------~~-~~~~~~~~~~~~-------------------~~a~~~~~~~~~~~~~~~~ 197 (666) . ................. .. ....+....... ....... ........... T Consensus 161 ~-~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~tv 238 (743) T protein:vir:10 161 S-YSGTLVTGEILSYDSATNTATITASGTLTSQYLLDTPEQGLIGSFTDNSTTEVGRTPGTYSNVPAS-GGTGTGATFNV 238 (743) T ss_pred c-ccccccccceeeeeecCcceeeeeccccceeeecccccccccccccccccccccccccceeeEEec-ccccccccccc Confidence 0 00000000000000000 00 000000000000 0000000 00000000000 Q ss_pred -ccchhhccccceeeeeecccceeeeeeccccccccce-----------------------eeeeecccc-ccccccccc Q lcl|Aclame:pro 198 -LETSRANITNQTFLTKLQKYDMPAVSAIYAGEIGNSL-----------------------EVEILARSA-FKNTAPDLT 252 (666) Q Consensus 198 -~~~a~~~~~~~~~~~~~~~~~~~~~~A~~~g~~gn~i-----------------------~v~v~~~~~-~~~~~~~~~ 252 (666) ........ +...... .........+++.. ++.+..... ......... T Consensus 239 ~v~~~~~~v-g~~v~~~-------~~~~~~~~~~~~~~~v~~~~~~~~t~~~~~~~~~~~g~~~~~a~~~~~~~~~~~~~ 310 (743) T protein:vir:10 239 VVADAGGGV-GGSVVVT-------LANPGTGYNQGETLTIASAATGDGTDILVTVATLSDGTIAITELKDWYLNTEIGST 310 (743) T ss_pred ccccccccc-ccccccc-------cccccceeeeccccccccccccccccchhheecccccceeeeecccccccchhhcc Confidence 00000000 0000000 00000000000000 000000000 000000000 Q ss_pred ccc---ccccccceeeeeeccCcCccccee--------eecccccccceee-ecccccccccccchhhhHhHhcccCceE Q lcl|Aclame:pro 253 MYP---YGGERTAARNLIPYAPQNDNQYAF--------IVRRDGVVVESYV-LSTLKGDKDVYGNSIYMDDFFGRGSSQY 320 (666) Q Consensus 253 ~~~---~~~~~~~~~~~~~~~~~~~~~~~~--------~v~~~g~~~et~~-ls~~~~~~~~~~~~~~~~~~~~~~~s~~ 320 (666) ... ....+..... ........+.+.+ .....+.++|++. ++...+.+...+...++..+++.. +.+ T Consensus 311 ~~~~~~~~~~~~t~~~-~~~~~~~~d~~~v~v~~~~~~~~~~~~~v~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~-s~~ 388 (743) T protein:vir:10 311 GIKLGDIGPRPGTSQF-ATDNGITDDQVHFAVIDTTGELTGTANTIVERLTYLSKLSDARSEENANIYYKNVINEQ-SAY 388 (743) T ss_pred ccccccccccceeeec-cccccccccceEEEEecCcceeeeccCceeEEEeeeecccccccccCcceeecceeccc-cce Confidence 000 0000000000 0000111111111 1233456667775 455566666666666666655432 333 Q ss_pred EEEecccccc-------------------------ccceeeeecCcccccccccccccccccccchhhhhhhhhcchhhc Q lcl|Aclame:pro 321 IYATAQGWVD-------------------------GFSGIISLAGGVSANEATTGGVGADPFIGAMMQGWGLFAERESIH 375 (666) Q Consensus 321 i~~~~~~~~~-------------------------~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 375 (666) +......... ......++.||.+ +.....+++.....++...+..+ T Consensus 389 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gG~d---------~~~~~~~~~~~~~~~~~~~~~~~ 459 (743) T protein:vir:10 389 LYHGNDAAVQIAASGEAWGQSSDQVLADAGTAFSRTTGYWVNLAGGND---------DFAYDAGEFGAAMDLFLDTEETE 459 (743) T ss_pred eeccCcccceeeeccccCccccceeeeecccccccccceEEEeecCcc---------ccccchhHHHHHHHHhhhccccC Confidence 2222111100 0011112222221 11222334444555555566667 Q ss_pred CccEEecccCCCchhHHHHHHHHHHHhhccccEEEEEcCCccccc------cccccCCHHHHHHHHhhccccchhhcccC Q lcl|Aclame:pro 376 VNLLIAGACAGEGDAFSTVQKHAVSIGDERQDCLVMVSPPRSTVV------NIPVTTAIDNLIAWREGSGNYNENNMNIN 449 (666) Q Consensus 376 ~~ll~~p~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 449 (666) ++||++|+++.+..+..+++++++++|+++++||+++|+|..... ......+..++..|++. +++ T Consensus 460 ~~ll~~p~~~~~~~~~~~v~~a~~~~~~~~~~~~a~~d~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~ 530 (743) T protein:vir:10 460 IDFVLMGGSMADEADTKSKATKVIAIAASRKDALAFVSPHKGNQIASTGNVALSSAQQKENTIAFFSD---------LTS 530 (743) T ss_pred cceEEecCcccCccchHHHHHHHHHHHHhhCCeEEEEecCCCccccccccccccccccchHHHHHHHh---------ccC Confidence 899999999988888899999999999999999999999975432 23344556666666654 478 Q ss_pred cceEEEEcCeEEEecCcCCceeEechHHHHHHHHHhhhhcCCceecccceecceeeeeeeeeecCChhHHhhhhhccceE Q lcl|Aclame:pro 450 TTYAVIDGNYKYQYDKYNDVNRWVPLAADIAGLCARTDAVSQPWMSPAGYNRGQIMNVVKLAIEPRKAHRDRLYQAAINP 529 (666) Q Consensus 450 s~~~~~~~p~~~~~d~~~~~~~~~p~s~~~ag~~a~~d~~~g~~~span~~~~~i~g~~~~~~~~~~~~~~~Ln~~gIn~ 529 (666) |+|+++||||++++|+.++..+++|||+++||+|||+|.++||||||+|+++.+|.|+.++++.+++.|++.||++|||| T Consensus 531 s~~~~~~~p~~~~~d~~~~~~~~~p~s~~~AGl~a~~D~~~g~~~span~~~~gi~g~~~~~~~~~~~~~~~Ln~~gIn~ 610 (743) T protein:vir:10 531 TSYAVFDSGYKYVYDRFTDKYRYIPCNGDVAGLCVQTSNQLDDWYSPAGLNRGGILNAVKLAYNPNKADRDELYQNRINP 610 (743) T ss_pred CeeEEEEccceeeeccccCceeEechhHHHHHHHHHhhccCCcEEccCCeeeeeeeccccceecCChhHHHhHhhCCceE Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred EEEecCCeEEEEcceecCCCccccceeehhhHHHHHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHhcCCeeee Q lcl|Aclame:pro 530 VIGAGGEGFILMGDKTATTVPSPFDRINVRRLFNMLKKNIGDSSKYKLFENNDNFTRASFRMEVSQYLSTIRSLGGIYDF 609 (666) Q Consensus 530 i~~~~g~G~~~wG~rT~~~~~~~~~~i~vrR~~~~i~~~~~~~~~~~v~epn~~~~~~~i~~~i~~~l~~l~~~gal~g~ 609 (666) |++|+++|+++||+||+++++++|+|||+||||+||+++|++.++|+||||||+.+|++|+++|+.||++||++|+|.|| T Consensus 611 i~~~~~~G~~~wG~rT~~s~d~~~~~i~vrR~~~~i~~si~~~~~~~v~e~n~~~~~~~i~~~i~~fL~~l~~~gal~~~ 690 (743) T protein:vir:10 611 VVSLRGQGITLFGDKTALAAPSAFDRINVRRLFLNLEKRARRLAEGVLFEQNDATTRAGFSSALNSYLSEVQARRGVTDY 690 (743) T ss_pred EEEecCCeEEEEcccccCCCCcccceEeehhhHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhcCceeee Confidence 99999999999999999877789999999999999999999999999999999999999999999999999999999999 Q ss_pred EEEEcccCCCHHHhhCCEEEEEEEEEecCCccEEEEEEEEeecchhHHHHHHH Q lcl|Aclame:pro 610 RVQCDTTNNTPDVIDRNEFVASMFIKPAKSINYIMLNFTAVATGSDFDEIIGP 662 (666) Q Consensus 610 ~v~~d~~~n~~~~i~~G~~~~~i~~~p~~p~e~i~~~~~~~~~~~~~~e~~~~ 662 (666) +|+||+++||+++|++|+|+++|+++|++|+|||+|||+|++++.+|+|++++ T Consensus 691 ~V~~d~~~nt~~~i~~G~~~~~i~~~p~~pae~I~~~~~~~~~~~~~~e~~~~ 743 (743) T protein:vir:10 691 LVICDESNNTPDIIDRNEFVAEVYVKPTRSINFITITFTATKTGVTFSEVVGR 743 (743) T ss_pred EEEEcCCCCCHHHhhCCeEEEEEEEEecCCcceEEEEEEEeecCcchHhhhcC Confidence 99999999999999999999999999999999999999999999999999999 No 15 >protein:vir:104858 Length: 729 # NCBI annotation: T4-like tail sheath protein # Family: family:all:661 # MgeID: mge:1630 # MgeName: P-SSM2 # Cross-refs: genbank:acc:YP_214361;genbank:gi:61806001;genbank:GeneID:3294378 Probab=100.00 E-value=2.3e-138 Score=775.20 Aligned_cols=644 Identities=30% Similarity=0.432 Sum_probs=393.2 Q ss_pred CceecCceEEEEec-CCccccccCcCceEEEEeccCCCCCcCEEeCCHHHHHHHcCCcC--CCchhHHHHHHHHHhCCCe Q lcl|Aclame:pro 1 MTLLSPGFETKETT-LSTTIVQSATGRAALVGKFQWGPAFQIIQVTNEVELVNKFGQPD--NNTADYFMSGANFLQYGND 77 (666) Q Consensus 1 ~~~~~PGVyvee~~-~~~~i~~v~tsv~~fvG~~~~Gpv~~p~~i~s~~~~~~~fG~~~--~~~~~~~~~~~~f~ngg~~ 77 (666) |+|++|||||||++ ++++|+||+||++||||+|+|||+|+|++|+||.||+|+||+|. +.++++|++++||+|||++ T Consensus 3 ~~~~~PgVyv~e~~~~~~~i~~v~ts~~~fvG~~~~Gp~~~p~~i~s~~~~~~~fG~~~~~~~~~~~~~~~~~f~ngg~~ 82 (729) T protein:vir:10 3 LNLASPGIVVREVDLTIGRVDPTSGSIGALVAPFAKGPVNDPQLIESEEDLLQTFGQPYSTDKHYEYWMVASSYLAYGGT 82 (729) T ss_pred ccccCCceEEEEecCCCcccccccccceeEEeccccCCCccCeEcCCHHHHHHHcCccccCCcchhHHHHHHHHHhCCce Confidence 66999999999996 57999999999999999999999999999999999999999984 5678899999999999999 Q ss_pred EEEEEcccCcccccccccccccceeeecccccc-----cccccceeee-ccccccccccccccccccceeEEeecccccc Q lcl|Aclame:pro 78 LRVVRVLNKEKAKNATALAGNIEFEITNEGSNY-----EVGDTIKIKH-NRQDIETAGKVTKVDGDGKVKGVFIPTGKII 151 (666) Q Consensus 78 ~~vvRv~~~~~~~~a~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~ 151 (666) |||||+.+....++................... .......... ....+....+.++.|++...........+.+ T Consensus 83 ~~vvRv~~~~~~~a~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~G~~gn~~~v~v~~~~~~~~ 162 (729) T protein:vir:10 83 MQVVRADDYNTQTGVGLKNAFVTGGVGVGATMLRITSNTHYNQLGYDENTISGVSVAAKNPGTWANGIKVAIIDGKADQI 162 (729) T ss_pred EEEEecCcccccccccccccccccccccccccccccccccccccccccCCCcceEEEEeccCccccceeeEEecccCcce Confidence 999999876654433211100000000000000 0000000000 0011122233444444433322211111100 Q ss_pred ccc-cc----cceeeeccc-----ceeE--EEeecccccceeee--eeeeeccceeeeeeccchhhccccceeeeeeccc Q lcl|Aclame:pro 152 AHA-KA----IGVYPELDG-----DWTA--EFTSSSGNGSAALS--VTKIVTDSGLLLTDLETSRANITNQTFLTKLQKY 217 (666) Q Consensus 152 ~~a-~~----~~~~~~~~~-----~~~~--~~~~~~~~~~~a~~--~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~ 217 (666) ... .. ......... .... .............. ......................... ........ T Consensus 163 ~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~s~~~~~~~~~~~~~~~~~-~~~~~~~~ 241 (729) T protein:vir:10 163 LTVASGNTTAVGSAVTQSISKTIGTATGTTTIDGVLKGIVTGSTDTTLEVKVISHISAAGVETAVEYQQNG-TYTFDNSG 241 (729) T ss_pred eeeeccccccceeeeeeeccccccccccceeeeeeecccccccccccccceecccccccccceeccccccc-eeeecccC Confidence 000 00 000000000 0000 00000000000000 0000000000000000000000000 00000000 Q ss_pred ceeeeeeccc-----------cccccceeeeeeccccccccccccccccccccccceeeeeeccCcCcccce-------e Q lcl|Aclame:pro 218 DMPAVSAIYA-----------GEIGNSLEVEILARSAFKNTAPDLTMYPYGGERTAARNLIPYAPQNDNQYA-------F 279 (666) Q Consensus 218 ~~~~~~A~~~-----------g~~gn~i~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~ 279 (666) .......... ..|.+......... ..........+.............+..+. . T Consensus 242 s~~~~a~~~~~~~~~~~~t~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~t~~~~~~~~~~~d~~~~~~~d~~~~ 313 (729) T protein:vir:10 242 SVNVIAAGSSGSGSAKSYTAQTDWFESQNIVLSNS--------TLEWDSIADAPGTSTYVSTRGGKNDEIHVLVIDDKGT 313 (729) T ss_pred ccceeeeccccccccccceeeeccccccccccccc--------cccccccccccccccccccccccccccceeeeccccc Confidence 0000000000 11111100000000 00000000000000000000000111111 1 Q ss_pred eecccccccceee-ecccccccccccchhhhHhHhcccCceEEEEecccc------------------------------ Q lcl|Aclame:pro 280 IVRRDGVVVESYV-LSTLKGDKDVYGNSIYMDDFFGRGSSQYIYATAQGW------------------------------ 328 (666) Q Consensus 280 ~v~~~g~~~et~~-ls~~~~~~~~~~~~~~~~~~~~~~~s~~i~~~~~~~------------------------------ 328 (666) .+...+.+++.+. ++...+.....+...++.+++.+.. .++....... T Consensus 314 ~~~~~g~vve~~~~~s~~~~~~~~~~~~~~~~~vi~~~s-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~ 392 (729) T protein:vir:10 314 ITGNSGTILEKHLSLSKAKDAEYSVGSSSYWRDFLATNS-KYIFGGGATSGITTTGYSVSSTNTLDTDSGWDQNAEGVNF 392 (729) T ss_pred cccCcccceeeeeeeeeccccccccccccccceeecccc-ceeeecccccccccccccccccceeccccccccccccccc Confidence 2233455555554 4555555555555555555544332 2221111100 Q ss_pred ccccceeeeecCcccccccccccccccccccchhhhhhhhhcchh--hcCccEEecccCCCchhHHHHHHHHHHHhhccc Q lcl|Aclame:pro 329 VDGFSGIISLAGGVSANEATTGGVGADPFIGAMMQGWGLFAERES--IHVNLLIAGACAGEGDAFSTVQKHAVSIGDERQ 406 (666) Q Consensus 329 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~~ll~~p~~~~~~~~~~~v~~~~~~~~~~~~ 406 (666) .........+.++.+...............+....+.++.++... ..++++++++...++.+...++++|++||++++ T Consensus 393 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~ 472 (729) T protein:vir:10 393 GASGVATLTLAGGTNYGDKTDLTTSGALSSGVDDIISGYTLFENTEEIEVDFILMGAAHHPKEQSQAVAEKVTAVAEARK 472 (729) T ss_pred cccceeEEEeecccccccccccccccccccchhHHHHHHHHhhcccccccceeeecCCCCCccchHHHHHHHHHHHHhcC Confidence 001111233444433222211111111111222234555555443 345667777777677788999999999999999 Q ss_pred cEEEEEcCCcccccccc---------ccCCHHHHHHHHhhccccchhhcccCcceEEEEcCeEEEecCcCCceeEechHH Q lcl|Aclame:pro 407 DCLVMVSPPRSTVVNIP---------VTTAIDNLIAWREGSGNYNENNMNINTTYAVIDGNYKYQYDKYNDVNRWVPLAA 477 (666) Q Consensus 407 ~~~~~~d~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~p~~~~~d~~~~~~~~~p~s~ 477 (666) +|++++|+|+...+... ..+..+++..|++.+ .+++|+++||||++++|+.++..+++|||+ T Consensus 473 ~~~a~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~p~~~~~d~~~~~~~~~p~s~ 543 (729) T protein:vir:10 473 DAVAFISPYRQAFLNDTVSGTVTVSNIDQTTENVVGFYAPL---------SSSTYSVFDSGYKYMFDRFNNTFRYVPLNG 543 (729) T ss_pred CeEEEecccccccccccccccccccccchhhHHHHHHHhhc---------cCCceEEEEcCeeEEecccCCceEEechhH Confidence 99999999866433221 223445555565542 468899999999999999999999999999 Q ss_pred HHHHHHHhhhhcCCceecccceecceeeeeeeeeecCChhHHhhhhhccceEEEEecCCeEEEEcceecCCCccccceee Q lcl|Aclame:pro 478 DIAGLCARTDAVSQPWMSPAGYNRGQIMNVVKLAIEPRKAHRDRLYQAAINPVIGAGGEGFILMGDKTATTVPSPFDRIN 557 (666) Q Consensus 478 ~~ag~~a~~d~~~g~~~span~~~~~i~g~~~~~~~~~~~~~~~Ln~~gIn~i~~~~g~G~~~wG~rT~~~~~~~~~~i~ 557 (666) |+||+|||+|.++||||||+|+++.+|.|+.++++.+++.|++.||++|||||++|+++|+++||+||+.+.+++|+||| T Consensus 544 ~~aGl~a~~d~~~g~~~span~~~~~i~g~~~~~~~~~~~~~~~Ln~~gIn~i~~~~~~G~~~wG~rT~~~~d~~~~~i~ 623 (729) T protein:vir:10 544 DIAGTCARTDIEQFPWFSPAGTARGPILNSVKLVYNPGKKQRDILYSNRINPVILSPGAGIILFGDKTGFGKSSAFDRIN 623 (729) T ss_pred HHHHHHHHhhccCCcEEccCCccccceecccceeeecChhhHhhhhhCCceEEEEecCCeEEEEcceecCCCCcccceee Confidence 99999999999999999999999999999999999999999999999999999999999999999999977778999999 Q ss_pred hhhHHHHHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHhcCCeeeeEEEEcccCCCHHHhhCCEEEEEEEEEec Q lcl|Aclame:pro 558 VRRLFNMLKKNIGDSSKYKLFENNDNFTRASFRMEVSQYLSTIRSLGGIYDFRVQCDTTNNTPDVIDRNEFVASMFIKPA 637 (666) Q Consensus 558 vrR~~~~i~~~~~~~~~~~v~epn~~~~~~~i~~~i~~~l~~l~~~gal~g~~v~~d~~~n~~~~i~~G~~~~~i~~~p~ 637 (666) +||||+||+++|++.++|+||||||+.+|++|+++|+.||++||++|+|+||+|+||+++||++||++|+|+|+|+++|. T Consensus 624 vrR~~~~i~~si~~~~~~~v~epn~~~~~~~i~~~i~~~L~~l~~~g~l~g~~v~~d~~~nt~~~i~~G~~~~~v~~~p~ 703 (729) T protein:vir:10 624 VRRLFIYLEDAISAAAKDQLFEFNDELTRTNFVNIVEPFLRDVQAKRGIFDFVVICDETNNTAAVIDSNEFVADIFIKPA 703 (729) T ss_pred hhhhHHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhccceeeeEEEEcCCCCCHHHhhCCeEEEEEEEEec Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred CCccEEEEEEEEeecchhHHHHHHHH Q lcl|Aclame:pro 638 KSINYIMLNFTAVATGSDFDEIIGPV 663 (666) Q Consensus 638 ~p~e~i~~~~~~~~~~~~~~e~~~~~ 663 (666) +|+|||+|||+|++++.+|+|++++| T Consensus 704 ~p~e~i~~~~~~~~~~~~~~e~~~~~ 729 (729) T protein:vir:10 704 RSINFIGLTFVATRTGVAFEEVIGSV 729 (729) T ss_pred CCccEEEEEEEEeecCccHHHHHhcC Confidence 99999999999999999999999999 No 16 >protein:vir:79092 Length: 477 # NCBI annotation: gp13, phage tail sheath protein # Family: family:all:115 # MgeID: mge:1862 # MgeName: phiE255 # Cross-refs: genbank:acc:YP_001111213;genbank:gi:134288804;genbank:GeneID:4960766 Probab=100.00 E-value=3.7e-107 Score=604.08 Aligned_cols=465 Identities=17% Similarity=0.160 Sum_probs=326.5 Q ss_pred Cc-eecCceEEEEec-CCccccccCcCceEEEEeccCCCCCcCEEeCCHHHHHHHcCCcCCCchhHHHHHHHHHhCCCeE Q lcl|Aclame:pro 1 MT-LLSPGFETKETT-LSTTIVQSATGRAALVGKFQWGPAFQIIQVTNEVELVNKFGQPDNNTADYFMSGANFLQYGNDL 78 (666) Q Consensus 1 ~~-~~~PGVyvee~~-~~~~i~~v~tsv~~fvG~~~~Gpv~~p~~i~s~~~~~~~fG~~~~~~~~~~~~~~~f~ngg~~~ 78 (666) |+ |++|||||||++ ++++|++|+|+|++|||++++||+|+|++|+||.||++ ||+.....++++++++||.|||++| T Consensus 1 M~~~~~pGVyv~E~~~g~~~I~~v~Tsv~~~VG~a~~~p~n~pv~its~~d~~~-~g~~~~~~tL~~Av~~~f~ngg~~~ 79 (477) T protein:vir:79 1 MAANYLHGVETIEKETGSRPVKVVKSAVIGLIGTAPIGPVNTPVQSLSDVDAAQ-FGPQLAGFTIPQALDAVYDYGSGTV 79 (477) T ss_pred CcCCCCCCeEEEEecCCcccccccCCceEEEEeecccCCCcccEEEccHHHHHH-hcCCCCCCcHHHHHHHHhhcCCceE Confidence 76 779999999995 78999999999999999999999999999999999986 7878888999999999999999999 Q ss_pred EEEEcccCcccccccccccccceeeecccccccccccceeeeccccccccccccccccccceeEEeeccccccccccccc Q lcl|Aclame:pro 79 RVVRVLNKEKAKNATALAGNIEFEITNEGSNYEVGDTIKIKHNRQDIETAGKVTKVDGDGKVKGVFIPTGKIIAHAKAIG 158 (666) Q Consensus 79 ~vvRv~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~a~~~~ 158 (666) |||||.+....+......... ... .. ........... T Consensus 80 ~vvrV~~~~~~~~~~a~~~~~------------~~~--------~~------~~~~~~~~~~~----------------- 116 (477) T protein:vir:79 80 IVINVLDPAVHKSNAASESVT------------FDA--------AT------GRAKLAHPAAA----------------- 116 (477) T ss_pred EEEeccCCccccccccccccc------------ccc--------cc------ccccccccccc----------------- Confidence 999997754333211100000 000 00 00000000000 Q ss_pred eeeecccceeEEEeecccccceeeeeeeeeccceeeeeeccchhhccccceeeeeecccceeeeeeccccccccceeeee Q lcl|Aclame:pro 159 VYPELDGDWTAEFTSSSGNGSAALSVTKIVTDSGLLLTDLETSRANITNQTFLTKLQKYDMPAVSAIYAGEIGNSLEVEI 238 (666) Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~A~~~g~~gn~i~v~v 238 (666) ...+............. . ...... ............+. T Consensus 117 ---------~~~v~~~~~~~~~~~~~--~-----~~~~~~-----------------~~~~~~~~~~~~~~--------- 154 (477) T protein:vir:79 117 ---------NLVLKNDSGGTTYTEGT--D-----YAVDLI-----------------NGVITRIKTGTIPA--------- 154 (477) T ss_pred ---------eeEEeecccccccccCc--c-----cccccc-----------------chhhhhhhcccccc--------- Confidence 00000000000000000 0 000000 00000000000000 Q ss_pred eccccccccccccccccccccccceeeeeeccCcCcccceeeecccccccceeeecccccccccccchhhhHhHhcccCc Q lcl|Aclame:pro 239 LARSAFKNTAPDLTMYPYGGERTAARNLIPYAPQNDNQYAFIVRRDGVVVESYVLSTLKGDKDVYGNSIYMDDFFGRGSS 318 (666) Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~et~~ls~~~~~~~~~~~~~~~~~~~~~~~s 318 (666) ....+....+.. + .. T Consensus 155 ------------------------------------~~~~~~~~~~~~---------------------------~--~~ 169 (477) T protein:vir:79 155 ------------------------------------AATAAKATYDYA---------------------------D--PT 169 (477) T ss_pred ------------------------------------ccceeeceeccC---------------------------C--cc Confidence 000000000000 0 00 Q ss_pred eEEEEeccccccccceeeeecCcccccccccccccccccccchhhhhhhhhcchh-----hcCccEEecccCCCchhHHH Q lcl|Aclame:pro 319 QYIYATAQGWVDGFSGIISLAGGVSANEATTGGVGADPFIGAMMQGWGLFAERES-----IHVNLLIAGACAGEGDAFST 393 (666) Q Consensus 319 ~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-----~~~~ll~~p~~~~~~~~~~~ 393 (666) .. ......+..+. .+ ..+++.++.+. ..++++++|++.. ... T Consensus 170 ~~-------------~~~~~~g~~~a-------------~~---~~tg~~al~~~~~~~~~~~~iv~apg~~~----~~~ 216 (477) T protein:vir:79 170 KV-------------TAADIIGAVNA-------------AG---MRTGMKALKDTYNLYGYFSKILIAPAYCT----QNS 216 (477) T ss_pred cc-------------eeeeecccccc-------------cc---cchhhhhhhhhhhhcccccceeecccccc----chh Confidence 00 00000000000 00 01111111111 1357888898754 467 Q ss_pred HHHHHHHHhhccccEEEEEcCCccccccccccCCHHHHHHHHhhccccchhhcccCcceEEEEcCeEEEecCcCCceeEe Q lcl|Aclame:pro 394 VQKHAVSIGDERQDCLVMVSPPRSTVVNIPVTTAIDNLIAWREGSGNYNENNMNINTTYAVIDGNYKYQYDKYNDVNRWV 473 (666) Q Consensus 394 v~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~p~~~~~d~~~~~~~~~ 473 (666) +..+|.++|+++ .+++++|+|. ..+.+++.+|++..... ..+++|+|+++||||++++|+.++..+++ T Consensus 217 v~~~l~~~~~~~-~~~a~~d~p~--------~~~~~~~~~~~~~~~~~---~~~~~s~~~~~~~p~~~~~~~~~~~~~~~ 284 (477) T protein:vir:79 217 VSVELEAMAVQL-GAIAYIDAPI--------GTTLAQALAGRGPAGTI---NFNTSSDRVRLCYPHVKVYDIATNAERLE 284 (477) T ss_pred HHHHHHHHHhhc-CeEEEEecCC--------CCChHHHhhhhhhcccc---ccccccceEEEEcCeeEEecccCCceeee Confidence 889999999987 4688888764 45678899999876543 34788999999999999999999999999 Q ss_pred chHHHHHHHHHhhhhcCCceecccceecceeeeee---eeeecCChhHHhhhhhccceEEEEecCCeEEEEcceecC--C Q lcl|Aclame:pro 474 PLAADIAGLCARTDAVSQPWMSPAGYNRGQIMNVV---KLAIEPRKAHRDRLYQAAINPVIGAGGEGFILMGDKTAT--T 548 (666) Q Consensus 474 p~s~~~ag~~a~~d~~~g~~~span~~~~~i~g~~---~~~~~~~~~~~~~Ln~~gIn~i~~~~g~G~~~wG~rT~~--~ 548 (666) |||+++||++||+|.++||||||+|+++.++.+.. ......++.|++.||++|||||++|+++|+++||+||++ + T Consensus 285 p~s~~~ag~~a~~d~~~g~~~span~~~~gv~~~~~~~~~~~~~~~~~~~~L~~~~i~~i~~~~~~G~~~wG~rT~~~~~ 364 (477) T protein:vir:79 285 PLSSRAAGLRARVDLDKGYWWSSSNQQLVGVTGVERPLSAMIDDPQSDVNMLNEQGITTVFSSYGSGLRLWGNRTAAWPT 364 (477) T ss_pred chHHHHHHHHHHhhccCCceEccCCceeecceecccccccccCCChhhHHHHhhCCceEEEEecCCcEEEEcccccCCCC Confidence 99999999999999999999999999987666542 233445678999999999999999999999999999996 3 Q ss_pred CccccceeehhhHHHHHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHhcCCeeeeEEEEcccCCCHHHhhCCEE Q lcl|Aclame:pro 549 VPSPFDRINVRRLFNMLKKNIGDSSKYKLFENNDNFTRASFRMEVSQYLSTIRSLGGIYDFRVQCDTTNNTPDVIDRNEF 628 (666) Q Consensus 549 ~~~~~~~i~vrR~~~~i~~~~~~~~~~~v~epn~~~~~~~i~~~i~~~l~~l~~~gal~g~~v~~d~~~n~~~~i~~G~~ 628 (666) .+++|+||++||+|+||+++|++.++|+|||||++.+|++|+++|+.||++||++|+|+||+|+||+++||++||++|+| T Consensus 365 ~~~~~~~i~vrR~~~~i~~~~~~~~~~~v~e~~~~~~~~~i~~~i~~~l~~l~~~g~l~g~~v~~~~~~nt~~~i~~G~~ 444 (477) T protein:vir:79 365 VTHMRNFENVRRTGDVINESLRYFSQQFVDAPIDQGLIDSLVESVNGFGRKLIGDGALLGFKAWFDPARNPKEELAAGHL 444 (477) T ss_pred CCccceeeehhhHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeEEEEecCCCCHHHhhCCeE Confidence 34689999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred EEEEEEEecCCccEEEEEEEEeecchhHHHHHHHH Q lcl|Aclame:pro 629 VASMFIKPAKSINYIMLNFTAVATGSDFDEIIGPV 663 (666) Q Consensus 629 ~~~i~~~p~~p~e~i~~~~~~~~~~~~~~e~~~~~ 663 (666) +++|+++|++|+|||+|+|++... .|+++.+.= T Consensus 445 ~~~i~~~p~~p~e~i~~~~~~~~~--~~~~~~~~~ 477 (477) T protein:vir:79 445 LINYKYTVPPPLERLTYETEITSE--YLLTLKGGN 477 (477) T ss_pred EEEEEEEecCCceeEEEEEEEech--HHhhhccCC Confidence 999999999999999999998766 477776554 No 17 >protein:vir:107865 Length: 477 # NCBI annotation: gp39 # Family: family:all:115 # MgeID: mge:1565 # MgeName: BcepMu # Cross-refs: genbank:acc:YP_024712;genbank:gi:48696949;genbank:GeneID:2845953 Probab=100.00 E-value=8e-107 Score=602.23 Aligned_cols=465 Identities=18% Similarity=0.149 Sum_probs=332.5 Q ss_pred Cc-eecCceEEEEec-CCccccccCcCceEEEEeccCCCCCcCEEeCCHHHHHHHcCCcCCCchhHHHHHHHHHhCCCeE Q lcl|Aclame:pro 1 MT-LLSPGFETKETT-LSTTIVQSATGRAALVGKFQWGPAFQIIQVTNEVELVNKFGQPDNNTADYFMSGANFLQYGNDL 78 (666) Q Consensus 1 ~~-~~~PGVyvee~~-~~~~i~~v~tsv~~fvG~~~~Gpv~~p~~i~s~~~~~~~fG~~~~~~~~~~~~~~~f~ngg~~~ 78 (666) |+ |++|||||||++ ++++|.+|+|+|++|||++++||+|+|++|+||.|| +.||+.....++++++++||.|||++| T Consensus 1 M~~~~~pGVyv~E~~~~~~~i~~v~T~v~~~VG~a~~gp~n~pv~its~~d~-~~~g~~~~~~tL~~Av~~~f~nGg~~~ 79 (477) T protein:vir:10 1 MAANYLHGVETIEKETGSRPVKVVKSAVIGLIGTAPIGPVNTPVQSLSDVDA-AQFGPQLAGFTIPQALDAVYDYGSGTV 79 (477) T ss_pred CcccCCCCeEEEEccCCcccccccCCceeEEEecccCCCCCcCEEEccHHHH-HHhccCCCCCcHHHHHHHHHhccceEE Confidence 77 568999999995 789999999999999999999999999999999999 569999999999999999999999999 Q ss_pred EEEEcccCcccccccccccccceeeecccccccccccceeeeccccccccccccccccccceeEEeeccccccccccccc Q lcl|Aclame:pro 79 RVVRVLNKEKAKNATALAGNIEFEITNEGSNYEVGDTIKIKHNRQDIETAGKVTKVDGDGKVKGVFIPTGKIIAHAKAIG 158 (666) Q Consensus 79 ~vvRv~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~a~~~~ 158 (666) |||||.+....+...... . ........ T Consensus 80 ~vVrV~~~~~~~~~~~~~----------~-----------------------~~~~~~~~-------------------- 106 (477) T protein:vir:10 80 IVINVLDPAVHKSNAANE----------P-----------------------VTFDAATG-------------------- 106 (477) T ss_pred EEEecCcccccccccccc----------c-----------------------cccccccc-------------------- Confidence 999997643322110000 0 00000000 Q ss_pred eeeecccceeEEEeecccccceeeeeeeeeccceeeeeeccchhhccccceeeeeecccceeeeeeccccccccceeeee Q lcl|Aclame:pro 159 VYPELDGDWTAEFTSSSGNGSAALSVTKIVTDSGLLLTDLETSRANITNQTFLTKLQKYDMPAVSAIYAGEIGNSLEVEI 238 (666) Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~A~~~g~~gn~i~v~v 238 (666) ... ..+.+.+...+.. T Consensus 107 ~~~----------------------------------------------------------------~~~~~~~~~~v~~ 122 (477) T protein:vir:10 107 RAK----------------------------------------------------------------LAHPAAANLVLKN 122 (477) T ss_pred eec----------------------------------------------------------------ccccccccccccc Confidence 000 0000000000000 Q ss_pred eccccccccccccccccccccccceeeeeeccCcCcccceeeecccccccceeeecccccccccccchhhhHhHhcccCc Q lcl|Aclame:pro 239 LARSAFKNTAPDLTMYPYGGERTAARNLIPYAPQNDNQYAFIVRRDGVVVESYVLSTLKGDKDVYGNSIYMDDFFGRGSS 318 (666) Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~et~~ls~~~~~~~~~~~~~~~~~~~~~~~s 318 (666) ..... ...............+. .... ........ T Consensus 123 ~a~~~--------------------------~~~~~~~~~~~~~~~~~--~~~~------------------~~~~~~~~ 156 (477) T protein:vir:10 123 DSGGT--------------------------TYAEGTDYAVDLINGVI--TRIK------------------TGTIPPGA 156 (477) T ss_pred ccccc--------------------------ccccchhhhhhhccccc--eecc------------------cccccccc Confidence 00000 00000000000000000 0000 00000000 Q ss_pred eEEEEeccccccccceeeeecCcccccccccccccccccccchhhhhhhhhcchhh-----cCccEEecccCCCchhHHH Q lcl|Aclame:pro 319 QYIYATAQGWVDGFSGIISLAGGVSANEATTGGVGADPFIGAMMQGWGLFAERESI-----HVNLLIAGACAGEGDAFST 393 (666) Q Consensus 319 ~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-----~~~ll~~p~~~~~~~~~~~ 393 (666) ......... +...........+..+ .....+|+.++++.+ .+.+|++|++.. ... T Consensus 157 ~~~~~~~~~-------------~~~~~~~~~~~~g~~~---~~~~~tGl~al~~~~~~~~~~~~~l~apg~~~----~~~ 216 (477) T protein:vir:10 157 TAAKATYDY-------------ADPTKVTAADIIGAVN---AAGMRTGMKALKDTYNLYGYFSKILIAPAYCT----QNS 216 (477) T ss_pred eeeeecccc-------------cccccccccccccccc---ccchhhhhhhhhhhhhhcchhccccccccccc----chh Confidence 000000000 0000000011111111 112234444444432 247888898854 456 Q ss_pred HHHHHHHHhhccccEEEEEcCCccccccccccCCHHHHHHHHhhccccchhhcccCcceEEEEcCeEEEecCcCCceeEe Q lcl|Aclame:pro 394 VQKHAVSIGDERQDCLVMVSPPRSTVVNIPVTTAIDNLIAWREGSGNYNENNMNINTTYAVIDGNYKYQYDKYNDVNRWV 473 (666) Q Consensus 394 v~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~p~~~~~d~~~~~~~~~ 473 (666) |+.+|.++|++++ +++++|+|. .++.+++.+|++..... ..+++|+|+++||||++++|+.++..+++ T Consensus 217 v~~~l~~~~~~~~-~~~~~d~p~--------~~~~~~~~~~~~~~~~~---~~~~~s~~~~~~~p~~~~~d~~~~~~~~~ 284 (477) T protein:vir:10 217 VSVELEAMAVQLG-AIAYIDAPI--------GTTLAQALAGRGPAGTI---NFNTSSDRVRLCYPHVKVYDTATNAERLE 284 (477) T ss_pred hHHHHHHHHhhCC-EEEEEecCC--------CCCHHHHHhhhhhcccc---ccccccceEEEEcCeEEEecccCCceeEE Confidence 8899999999875 688888764 46778899999876543 34678999999999999999999999999 Q ss_pred chHHHHHHHHHhhhhcCCceecccceecceeeeee---eeeecCChhHHhhhhhccceEEEEecCCeEEEEcceecCC-- Q lcl|Aclame:pro 474 PLAADIAGLCARTDAVSQPWMSPAGYNRGQIMNVV---KLAIEPRKAHRDRLYQAAINPVIGAGGEGFILMGDKTATT-- 548 (666) Q Consensus 474 p~s~~~ag~~a~~d~~~g~~~span~~~~~i~g~~---~~~~~~~~~~~~~Ln~~gIn~i~~~~g~G~~~wG~rT~~~-- 548 (666) |||+++||++||+|.++||||||+|+++.+|.++. ......++.|++.||++|||+|++|+++|+++||+||++. T Consensus 285 p~s~~~ag~~a~~d~~~g~~~span~~~~gi~~~~~~~~~~~~~~~~~~~~L~~~gi~~i~~~~~~G~~~wG~rT~~~~~ 364 (477) T protein:vir:10 285 PLSSRAAGLRARVDLDKGYWWSSSNQQLVGVTGVERPLSAMIDDPQSDVNMLNEQGITTVFSSYGSGLRLWGNRTAAWPT 364 (477) T ss_pred chHHHHHHHHHHhhhcCCceeccCCceeccccccccccccccCCChhhHHHHhhCCceEEEEecCCcEEEEcccccCCCC Confidence 99999999999999999999999999987777653 2334456789999999999999999999999999999954 Q ss_pred CccccceeehhhHHHHHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHhcCCeeeeEEEEcccCCCHHHhhCCEE Q lcl|Aclame:pro 549 VPSPFDRINVRRLFNMLKKNIGDSSKYKLFENNDNFTRASFRMEVSQYLSTIRSLGGIYDFRVQCDTTNNTPDVIDRNEF 628 (666) Q Consensus 549 ~~~~~~~i~vrR~~~~i~~~~~~~~~~~v~epn~~~~~~~i~~~i~~~l~~l~~~gal~g~~v~~d~~~n~~~~i~~G~~ 628 (666) .++.|+||++||||+||+++|++.++|+|||||++.+|++|+++|+.||++||++|+|+||+|+||+++||++||++|+| T Consensus 365 ~~~~~~~~~vrR~~~~i~~~~~~~~~~~v~~~~~~~~~~~i~~~i~~~l~~l~~~g~l~g~~v~~~~~~nt~~~i~~G~~ 444 (477) T protein:vir:10 365 VTHMRNFENVRRTGDVINESLRYFSQQFVDAPIDQGLIDSLVESVNGFGRKLIGDGALLGFKAWFDPARNPKEELAAGHL 444 (477) T ss_pred CCcccceeehhhHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeEEEEecCCCCHHHhhCCeE Confidence 34579999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred EEEEEEEecCCccEEEEEEEEeecchhHHHHHHHH Q lcl|Aclame:pro 629 VASMFIKPAKSINYIMLNFTAVATGSDFDEIIGPV 663 (666) Q Consensus 629 ~~~i~~~p~~p~e~i~~~~~~~~~~~~~~e~~~~~ 663 (666) +++|+++|++|+|||+|++++... .|+|+.+.= T Consensus 445 ~~~i~~~p~~p~e~i~~~~~~~~~--~~~~~~~g~ 477 (477) T protein:vir:10 445 LINYKYTVPPPLERLTYETEITSE--YLLTLKGGN 477 (477) T ss_pred EEEEEEEecCCcceEEEEEEEcch--HHhhhhcCC Confidence 999999999999999999988665 577777655 No 18 >protein:vir:98824 Length: 774 # NCBI annotation: putative phage tail sheath protein # Family: family:all:661 # MgeID: mge:1530 # MgeName: Ma-LMM01 # Cross-refs: genbank:acc:YP_851105;genbank:gi:117530262;genbank:GeneID:4484488 Probab=100.00 E-value=4.2e-103 Score=581.83 Aligned_cols=471 Identities=16% Similarity=0.137 Sum_probs=309.9 Q ss_pred CceecCceEEEEec-CCccccc-cCcCceEEEEeccCCCCCcCEEeCCHHHHHHHcCCcCCCchhHHHHHHHHHhCCCeE Q lcl|Aclame:pro 1 MTLLSPGFETKETT-LSTTIVQ-SATGRAALVGKFQWGPAFQIIQVTNEVELVNKFGQPDNNTADYFMSGANFLQYGNDL 78 (666) Q Consensus 1 ~~~~~PGVyvee~~-~~~~i~~-v~tsv~~fvG~~~~Gpv~~p~~i~s~~~~~~~fG~~~~~~~~~~~~~~~f~ngg~~~ 78 (666) -++-.|||||||++ ++++|+| |+||++||||.++|||+|+|++|+||.||.+.||..... ++|++.+ T Consensus 281 ~~v~~~GVYVEEVpSGvrtIeGGV~TSVAAFVG~A~rGPvn~PvlITS~aD~~~~Fg~~~GG-----------l~GassA 349 (774) T protein:vir:98 281 RNVEDNGVVIQLEPALTGSISNRFSFYVTANDNTANRGFTTSPALVTTIPDPAIHFTSFQGG-----------LDGPRSA 349 (774) T ss_pred EEEecCceEEEEeCCCCccccccccceeeeecccccCCCCCcCEEEeehhHhhhhhccccCC-----------cccccee Confidence 56779999999995 7899987 999999999999999999999999999988888754322 1333333 Q ss_pred EEEEcccCcccccccccccccceeeecccccccccccceeeeccccccccccccccccccceeEEeeccccccccccccc Q lcl|Aclame:pro 79 RVVRVLNKEKAKNATALAGNIEFEITNEGSNYEVGDTIKIKHNRQDIETAGKVTKVDGDGKVKGVFIPTGKIIAHAKAIG 158 (666) Q Consensus 79 ~vvRv~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~a~~~~ 158 (666) |.+.... .+ T Consensus 350 ~r~~~~~--------------------sG--------------------------------------------------- 358 (774) T protein:vir:98 350 FRDFYTF--------------------NG--------------------------------------------------- 358 (774) T ss_pred eeeeeee--------------------cc--------------------------------------------------- Confidence 3111000 00 Q ss_pred eeeecccceeEEEeecccccceeeeeeeeeccceeeeeeccchhhccccceeeeeecccceeeeeeccccccccceeeee Q lcl|Aclame:pro 159 VYPELDGDWTAEFTSSSGNGSAALSVTKIVTDSGLLLTDLETSRANITNQTFLTKLQKYDMPAVSAIYAGEIGNSLEVEI 238 (666) Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~A~~~g~~gn~i~v~v 238 (666) .....+.|..+|.|||.++|++ T Consensus 359 ----------------------------------------------------------~~~L~i~A~~pGawGN~ItV~I 380 (774) T protein:vir:98 359 ----------------------------------------------------------TPLLRLQAVSEGNWGNQVTVSI 380 (774) T ss_pred ----------------------------------------------------------cceEEEEEeecCcCCCceEEEE Confidence 0012344556667777666666 Q ss_pred eccccccccccccccccccccccceeeeeeccCcCcccceeeec---ccccccceeeecccc-----cccc---cccchh Q lcl|Aclame:pro 239 LARSAFKNTAPDLTMYPYGGERTAARNLIPYAPQNDNQYAFIVR---RDGVVVESYVLSTLK-----GDKD---VYGNSI 307 (666) Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~---~~g~~~et~~ls~~~-----~~~~---~~~~~~ 307 (666) ......... .... ......... ...++.+.+... ..+.+.|.+.-.... .... ...... T Consensus 381 ~~~t~~~~~---l~v~--~~~~s~f~~-----~~a~e~~tv~~~~~~~~~~v~e~~dn~~i~~~~~~~~~~~in~vs~lv 450 (774) T protein:vir:98 381 YPVNNSEFR---LNVQ--DLNGSAFNP-----PLADEVYTVKLGDTNESGELNALLDSKFIRGFFLPKSIDSINYDAALV 450 (774) T ss_pred EecCCceeE---EEEE--ecCCccccc-----cccceeEEEecccccccceeeeeeceeeEeeccccccccccccccccc Confidence 433211100 0000 000000000 000000010000 001111111000000 0000 000000 Q ss_pred hhH----hHhcccCceEE-EEeccccccccceeeeecCcccccccccccccccccccchhhhhhhhhcchhhcCccEEec Q lcl|Aclame:pro 308 YMD----DFFGRGSSQYI-YATAQGWVDGFSGIISLAGGVSANEATTGGVGADPFIGAMMQGWGLFAERESIHVNLLIAG 382 (666) Q Consensus 308 ~~~----~~~~~~~s~~i-~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ll~~p 382 (666) ... ...+......- ..............+++.+|.++.....+.++. .....+...+++|+.+ T Consensus 451 ~~~~~~~a~~d~~~~~~~~~~~~~~~~~~~~v~v~lagG~Dg~~tt~~~igg------------~~~~~~~tgi~aLl~a 518 (774) T protein:vir:98 451 RQSPLRLAPPDESETDVENPAHVDFYGPNVLVDVTLENGYDGPPVTNDDYVS------------IIRTLENQPVHILLVG 518 (774) T ss_pred ccchhcccccccccccccccccccccCCcceEEEeecCCCCcccccchheec------------ccccccccceeEEEcC Confidence 000 00000000000 000000001111234455655543332222111 1112223345566553 Q ss_pred ccCCCchhHHHHHHHHHHHhhccccEEEEEcCCccccccccccCCHHHHHHHHhhccccchhhcccCcceEEEEcCeEEE Q lcl|Aclame:pro 383 ACAGEGDAFSTVQKHAVSIGDERQDCLVMVSPPRSTVVNIPVTTAIDNLIAWREGSGNYNENNMNINTTYAVIDGNYKYQ 462 (666) Q Consensus 383 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~p~~~~ 462 (666) ... .....+++.++..+|..+++|++++|+|. +.+.+++++|++ +++|+|+++||||+++ T Consensus 519 ~~~--~~V~~aii~~~e~~~~~~~~r~avid~p~--------g~t~~~Ai~~r~----------~f~S~~aal~~Pwvkv 578 (774) T protein:vir:98 519 TTN--VGVQQALITEAERASDSDGLRIAVLAAPP--------RTTPTLAASVTR----------GFNSTRAVMVAGWFTY 578 (774) T ss_pred ccc--hhhHHHHHHHHHHhhhcccceEEEEECCC--------CCCHHHHHHHHh----------ccCCceEEEEeCcEEE Confidence 321 11223333444444444588999988764 467889999997 3679999999999999 Q ss_pred ecCcCCceeEechHHHHHHHHHhhhhcCCceecccceecceeeeee---eeeecCChhHHhhhhhccceEEE-EecCCeE Q lcl|Aclame:pro 463 YDKYNDVNRWVPLAADIAGLCARTDAVSQPWMSPAGYNRGQIMNVV---KLAIEPRKAHRDRLYQAAINPVI-GAGGEGF 538 (666) Q Consensus 463 ~d~~~~~~~~~p~s~~~ag~~a~~d~~~g~~~span~~~~~i~g~~---~~~~~~~~~~~~~Ln~~gIn~i~-~~~g~G~ 538 (666) +|+.++..+++|||+++||++||+| |||||+|+.+.++.+.. .+....++.|++.|++++||+++ .++++|+ T Consensus 579 ~D~~~g~~~~vPpSg~vAGl~ArtD----v~kSPANk~I~Givg~ai~~~l~~~~t~ae~d~Ln~~gIN~i~itt~g~G~ 654 (774) T protein:vir:98 579 AGQPNSSRYGVPGAAVYAGKLAAID----FFVSPAARSLVGPLFNIIESDTDNYTSRSNQDIYSAARLEVLSLDTVDRTY 654 (774) T ss_pred eccCCCceeecChhHHHHHHHHhcC----cccccCCceeecceeccccccccccccchhhhhhcccccceeEEEEcCCcE Confidence 9999999999999999999999999 99999999877665532 23445678999999999999997 6889999 Q ss_pred EEEcceecCCCccccceeehhhHHHHHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHhcCCeeeeE-EEEcccC Q lcl|Aclame:pro 539 ILMGDKTATTVPSPFDRINVRRLFNMLKKNIGDSSKYKLFENNDNFTRASFRMEVSQYLSTIRSLGGIYDFR-VQCDTTN 617 (666) Q Consensus 539 ~~wG~rT~~~~~~~~~~i~vrR~~~~i~~~~~~~~~~~v~epn~~~~~~~i~~~i~~~l~~l~~~gal~g~~-v~~d~~~ 617 (666) ++||+||++++ ++|+||++||||+||+++|.+.++|+||||||+.+|++|+++++.||++||++|+|+||+ |+||+++ T Consensus 655 rvWG~RTlssD-p~wr~InVRRlfd~Ie~SI~~~~~~~VfEPNd~~l~~~I~~sI~~fL~~L~~~GaL~G~~~V~~D~et 733 (774) T protein:vir:98 655 RFASGVTLSTD-PAWERIYLRRVHDVVRQGAHAILRNYVAMPNSRLVRNQIAAALNAFMGELKRNGNIVSFRPAIIDGSN 733 (774) T ss_pred EEEcccccCCC-cccceEeehhhHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCceecceEEEEcCCC Confidence 99999999876 489999999999999999999999999999999999999999999999999999999997 8999999 Q ss_pred CCHHHhhCCEEEEEEEEEecCCccEEEEEEEEeecchhHHH Q lcl|Aclame:pro 618 NTPDVIDRNEFVASMFIKPAKSINYIMLNFTAVATGSDFDE 658 (666) Q Consensus 618 n~~~~i~~G~~~~~i~~~p~~p~e~i~~~~~~~~~~~~~~e 658 (666) ||+++|++|+|+|+|+++|.+|+|||+|||+|+.++++|+| T Consensus 734 Nt~~dI~~G~l~i~I~vaP~~PAEfIilri~q~t~~~~l~E 774 (774) T protein:vir:98 734 NSTAAYFSRELYVSLQFQPLYSADYIYVTISRDTETSPLGE 774 (774) T ss_pred CCHHHhhCCEEEEEEEEEecCCcceEEEEEEEeecceeccC Confidence 99999999999999999999999999999999999999999 No 19 >protein:vir:103168 Length: 641 # NCBI annotation: gp122 # Family: family:all:661 # MgeID: mge:1583 # MgeName: Syn9 # Cross-refs: genbank:acc:YP_717789;genbank:gi:113200626;genbank:GeneID:4239177 Probab=100.00 E-value=1.4e-96 Score=546.09 Aligned_cols=528 Identities=23% Similarity=0.322 Sum_probs=316.5 Q ss_pred Cc-eecCceEEEEecCCccccccCcCceEEEEeccCCCCCcCEEeCCHHHHHHHcCCcCCCchhHHHHHHHHHhCCCeEE Q lcl|Aclame:pro 1 MT-LLSPGFETKETTLSTTIVQSATGRAALVGKFQWGPAFQIIQVTNEVELVNKFGQPDNNTADYFMSGANFLQYGNDLR 79 (666) Q Consensus 1 ~~-~~~PGVyvee~~~~~~i~~v~tsv~~fvG~~~~Gpv~~p~~i~s~~~~~~~fG~~~~~~~~~~~~~~~f~ngg~~~~ 79 (666) |. |++|||||||+|++++|++|+|+++||||+|+|||+++|++|+||.||+++||+|++.+|++|++++||+|||++|| T Consensus 3 m~~~~sPGVyv~E~~~~~~i~~v~tsvaafvG~~~~GP~~~p~~v~s~~d~~~~FG~~~~~~~l~~av~~fF~ngG~~~~ 82 (641) T protein:vir:10 3 VSNQLSPGVVIQERDLTAVTTPIGLNVGVLAAPFTKGPVEEIFEVSTERDLASVFGEPNDYNYEYWFTASQFLSYGGVLK 82 (641) T ss_pred CccccCCceEEEEecCCCcccccCCccceEEecccCCCCCccEEecCHHHHHHHcCCcCCCcchHHHHHHHHHhcCCEEE Confidence 76 99999999999988899999999999999999999999999999999999999999999999999999999999999 Q ss_pred EEEcccCccccccccccccc-----------------ceeeecccccccccccceeeeccccccccc--cccccccccc- Q lcl|Aclame:pro 80 VVRVLNKEKAKNATALAGNI-----------------EFEITNEGSNYEVGDTIKIKHNRQDIETAG--KVTKVDGDGK- 139 (666) Q Consensus 80 vvRv~~~~~~~~a~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~- 139 (666) |||+.+....++. ...+.. ......+..++.+++.+.+.+......... ..+....... T Consensus 83 vvRv~~~~~~~a~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~pG~~gn~l~v~i~~~~~~~~~~~~~~~~~~~~~~ 161 (641) T protein:vir:10 83 AIRLNAASLKNSV-DSGTAPLIKNLQEYETTYESSNSNTFKFASRDAGALGNSVGIFITDAGPDQIAVLPAPGTGNEWEF 161 (641) T ss_pred EEEecCccccccc-cccchhhccccccccccccCcCccccEEEeccCCCcCCceEEEEEcCCCcceeeeeccccccccee Confidence 9999765433322 111111 111122334455666555544321100000 0000000000 Q ss_pred -eeEEeeccccccc---ccc---ccceee-ec--ccceeEEE---------------------eecccccceeeeeeeee Q lcl|Aclame:pro 140 -VKGVFIPTGKIIA---HAK---AIGVYP-EL--DGDWTAEF---------------------TSSSGNGSAALSVTKIV 188 (666) Q Consensus 140 -~~~~~~~t~~~~~---~a~---~~~~~~-~~--~~~~~~~~---------------------~~~~~~~~~a~~~~~~~ 188 (666) ............. ... ...... .. .......+ ................. T Consensus 162 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~~a~~~~~~~~~~~~a~~~~~~i~~~~~g~~g~~~~~~~~ 241 (641) T protein:vir:10 162 VADEAVTAASGASAKVYRYSIRLTLTNVVGTFVPGGATTISISGSDESVDVLAWDAGNKYLEIALPAGGVTGIFADAQVV 241 (641) T ss_pred ccceeeeeccCcccccccccccccccceeeecccCCcceeEecccccccccccccCCcceeeeeecCCcceeeeeeeeec Confidence 0000000000000 000 000000 00 00000000 00000000000000000 Q ss_pred ccceeeeeeccchhhccccceeeeeecccceeeeeeccccccccceeeeeecccccccccccccccc---ccccccceee Q lcl|Aclame:pro 189 TDSGLLLTDLETSRANITNQTFLTKLQKYDMPAVSAIYAGEIGNSLEVEILARSAFKNTAPDLTMYP---YGGERTAARN 265 (666) Q Consensus 189 ~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~A~~~g~~gn~i~v~v~~~~~~~~~~~~~~~~~---~~~~~~~~~~ 265 (666) ..+...... ...... .............+++...+.++....+.+.....+......+.... ....+..... T Consensus 242 t~gt~~~t~----a~~g~~-~~~~~~~~~~~ia~aat~ag~~g~~~~v~~~~v~d~~~a~~~~~g~~~~~va~~~gts~~ 316 (641) T protein:vir:10 242 TQGTNTAAI----ASSGIE-RRLYIGKDSGSINFAATDAVVDTNATSATISSVRNEYAEREYLPGSKWVNVAARPGTSLY 316 (641) T ss_pred cCCccceee----ecccch-hhhhhccccccceeeeecccccccceeeEeeeeeeeecccccccccccccccccchhhhh Confidence 000000000 000000 00011112233345666777777777766554444333333332211 1112222233 Q ss_pred eeeccCcCcccceeeec-------ccccccceee-ecccccccccccchhhhHhHhcccCceEEEEecccccccc----- Q lcl|Aclame:pro 266 LIPYAPQNDNQYAFIVR-------RDGVVVESYV-LSTLKGDKDVYGNSIYMDDFFGRGSSQYIYATAQGWVDGF----- 332 (666) Q Consensus 266 ~~~~~~~~~~~~~~~v~-------~~g~~~et~~-ls~~~~~~~~~~~~~~~~~~~~~~~s~~i~~~~~~~~~~~----- 332 (666) .....+..++.+.+++. ..|.++|++. +++..+.++..+...++..++++ .+.++........... T Consensus 317 a~~~g~~~D~~~~lv~d~~~~~~g~~g~v~e~~~~~s~~~~~~~~~~~~~~~~~~~~~-~s~~v~~~~~~~~~~~~~~~~ 395 (641) T protein:vir:10 317 ANSVGGVNDELHVLVIDVDGKITGNPGSVLERFIGVSKASDAKTSIGEVNYYKEVIKQ-QSAYVYWGSHETAPFLGTAAN 395 (641) T ss_pred hhhcCCcccceEEEEEeecceeeccccceeeeeecccccCCcccccccceeeeeeecc-ccceEEEeccccccccccccc Confidence 33444555566665554 3567889986 78888888888888888888876 4555554322111000 Q ss_pred ----------------------------------------ceeeeecCcccccccccccccccccccchhhhhhhhhc-- Q lcl|Aclame:pro 333 ----------------------------------------SGIISLAGGVSANEATTGGVGADPFIGAMMQGWGLFAE-- 370 (666) Q Consensus 333 ----------------------------------------~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-- 370 (666) ...+.+.+|.+...... ....+....++++..+ T Consensus 396 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gG~d~~~~~~-----~~~~~~~~~~tg~~~~~~ 470 (641) T protein:vir:10 396 AAAGDWGASALNRRYNLLRSTAGTTSFPAGAVTVGSKNNATHYYRLANGADYSASGA-----LYNLSNVDIATAYELIED 470 (641) T ss_pred ccccccccccccccccccccccccccccccccccCCCCcceeEEEeecCcccccccc-----cccccchhHHHHHHHhhh Confidence 00111222222111100 0111122223444444 Q ss_pred chhhcCccEEecccCCCchhHHHHHHHHHHHhhccccEEEEEcCCccccccccc-cCCHHHHHHHHhhccccchhhcccC Q lcl|Aclame:pro 371 RESIHVNLLIAGACAGEGDAFSTVQKHAVSIGDERQDCLVMVSPPRSTVVNIPV-TTAIDNLIAWREGSGNYNENNMNIN 449 (666) Q Consensus 371 ~~~~~~~ll~~p~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 449 (666) .|...+++||+|+...+..+..+++.++++|||+||+||+|+|+|+...++.+. ....+++++||+. +++ T Consensus 471 ~e~~~i~~l~~~~~~~~~~~~~~v~~~~i~~ce~~~d~~ailD~p~~~~~~~~~~~~~~~~~~~~~~~---------~~~ 541 (641) T protein:vir:10 471 PESQVIDYVLSGPAGADEAAAIAKATTITTIVESRKDCMAFLSPLRSDVIGVSNTTTVTENLVNYFNQ---------LPS 541 (641) T ss_pred hhhhccceeeecCCCCCcchhHHHHHHHHHHHHhcCCEEEEEcCCcccccCCCchhhHHHHHHHHHhh---------cCC Confidence 444567889999888887888999999999999999999999999876665543 3456788899864 467 Q ss_pred cceEEEEcCeEEEecCcCCceeEechHHHHHHHHHhhhhcCCceecccceecceeeeeeeeeecCChhHHhhhhhccceE Q lcl|Aclame:pro 450 TTYAVIDGNYKYQYDKYNDVNRWVPLAADIAGLCARTDAVSQPWMSPAGYNRGQIMNVVKLAIEPRKAHRDRLYQAAINP 529 (666) Q Consensus 450 s~~~~~~~p~~~~~d~~~~~~~~~p~s~~~ag~~a~~d~~~g~~~span~~~~~i~g~~~~~~~~~~~~~~~Ln~~gIn~ 529 (666) |+|+++||||++++||.+++.+++||||||||+|||+|.+|||||||||.+++.|+|++++++.+++.|++.||++|||| T Consensus 542 s~yaa~y~P~~~v~dp~~~~~~~vPpsG~iAGv~ArtD~~rGvwkAPAn~~~~~i~gv~~l~~~~~~~e~~~Lnp~gIN~ 621 (641) T protein:vir:10 542 SNYVVFDSGYKYIYDKYNDVYRYVPCNGDIAGLILETGLEEEPWFSPAGFQRGVLRNAVKLAYSPNKTQRDRLYANRINP 621 (641) T ss_pred CceEEEEeceeEeecccCCceeEecCCHHHHHHHHhhhccCCceECcCCcccceeeeeeeeeEecChhHHhhhhhcccce Confidence 99999999999999999999999999999999999999999999999999988899999999999999999999999999 Q ss_pred EEEecCCeEEEEcceecCCCcccc Q lcl|Aclame:pro 530 VIGAGGEGFILMGDKTATTVPSPF 553 (666) Q Consensus 530 i~~~~g~G~~~wG~rT~~~~~~~~ 553 (666) ||.|||+|++- +.-.-. .+. T Consensus 622 ir~fpg~G~v~--~~~~~~--~~~ 641 (641) T protein:vir:10 622 VVSFPGHAMIN--NNIAFH--TKL 641 (641) T ss_pred EEecCCceeec--ceeeee--ecC Confidence 99999999862 110000 000 No 20 >protein:vir:6079 Length: 396 # NCBI annotation: gpFI # Family: family:all:115 # MgeID: mge:126 # MgeName: WPhi # Cross-refs: genbank:acc:NP_878220;genbank:gi:33438919;genbank:GeneID:1457754 Probab=100.00 E-value=1.8e-94 Score=534.50 Aligned_cols=387 Identities=14% Similarity=0.126 Sum_probs=313.5 Q ss_pred CceecCceEEEEe-cCCccccccCcCceEEEEeccCC-----CCCcCEEeCCHHHHHHHcCCcCCCchhHHHHHHHHHhC Q lcl|Aclame:pro 1 MTLLSPGFETKET-TLSTTIVQSATGRAALVGKFQWG-----PAFQIIQVTNEVELVNKFGQPDNNTADYFMSGANFLQY 74 (666) Q Consensus 1 ~~~~~PGVyvee~-~~~~~i~~v~tsv~~fvG~~~~G-----pv~~p~~i~s~~~~~~~fG~~~~~~~~~~~~~~~f~ng 74 (666) |+.-.|||||+|+ +++++|.+++|++++|||.++++ |.++|++|+|+.+|...|| ....+.+++..+|.|| T Consensus 1 m~~~~~Gv~v~e~~~~~~~v~~~~tav~~fvGta~~~~~~~~p~~~p~~v~s~~~~~~~~g---~~~tl~~a~~~~~~~g 77 (396) T protein:vir:60 1 MSDYHHGVQVLEINEGTRVISTVSTAIVGMVCTASDADAEIFPLNKPVLITNVQSAIAKAG---KKGTLAASLQAIADQS 77 (396) T ss_pred CCCCCCCeEEEEcCCCcccccccCceeEEEEecccccccccccCccCeEeechHHHHHhhc---CcchhHHHHHHHhhcc Confidence 9999999999999 58899999999999999999764 8899999999999999999 4667889999999999 Q ss_pred CCeEEEEEcccCcccccccccccccceeeecccccccccccceeeeccccccccccccccccccceeEEeeccccccccc Q lcl|Aclame:pro 75 GNDLRVVRVLNKEKAKNATALAGNIEFEITNEGSNYEVGDTIKIKHNRQDIETAGKVTKVDGDGKVKGVFIPTGKIIAHA 154 (666) Q Consensus 75 g~~~~vvRv~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~a 154 (666) |..||++|+..+....... T Consensus 78 g~~~~vv~~~~~~~~~~~~------------------------------------------------------------- 96 (396) T protein:vir:60 78 KPVTVVVRVEDGTGEDEET------------------------------------------------------------- 96 (396) T ss_pred CceEEEEeccccccccccc------------------------------------------------------------- Confidence 9999999974421000000 Q ss_pred cccceeeecccceeEEEeecccccceeeeeeeeeccceeeeeeccchhhccccceeeeeecccceeeeeeccccccccce Q lcl|Aclame:pro 155 KAIGVYPELDGDWTAEFTSSSGNGSAALSVTKIVTDSGLLLTDLETSRANITNQTFLTKLQKYDMPAVSAIYAGEIGNSL 234 (666) Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~A~~~g~~gn~i 234 (666) . .... . ..+ T Consensus 97 ----------------------~--~~~~-------------------------------------------~----~~~ 105 (396) T protein:vir:60 97 ----------------------K--LAQT-------------------------------------------V----SNI 105 (396) T ss_pred ----------------------c--cccc-------------------------------------------c----ccc Confidence 0 0000 0 000 Q ss_pred eeeeeccccccccccccccccccccccceeeeeeccCcCcccceeeecccccccceeeecccccccccccchhhhHhHhc Q lcl|Aclame:pro 235 EVEILARSAFKNTAPDLTMYPYGGERTAARNLIPYAPQNDNQYAFIVRRDGVVVESYVLSTLKGDKDVYGNSIYMDDFFG 314 (666) Q Consensus 235 ~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~et~~ls~~~~~~~~~~~~~~~~~~~~ 314 (666) .... +... ...|. .. T Consensus 106 ~~~~-----------------------------------d~~~----~~tg~-----------------------~a--- 120 (396) T protein:vir:60 106 IGTT-----------------------------------DENG----QYTGL-----------------------KA--- 120 (396) T ss_pred cccc-----------------------------------cccc----cccch-----------------------hh--- Confidence 0000 0000 00000 00 Q ss_pred ccCceEEEEeccccccccceeeeecCcccccccccccccccccccchhhhhhhhhcchhhcCccEEecccCCCchhHHHH Q lcl|Aclame:pro 315 RGSSQYIYATAQGWVDGFSGIISLAGGVSANEATTGGVGADPFIGAMMQGWGLFAERESIHVNLLIAGACAGEGDAFSTV 394 (666) Q Consensus 315 ~~~s~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ll~~p~~~~~~~~~~~v 394 (666) +. ....+ ....+.++++|++. ...+ T Consensus 121 -----------------------l~-----------------------~~~~~----~~~~~~il~ap~~~-----~~~v 145 (396) T protein:vir:60 121 -----------------------LL-----------------------AAESV----TGVKPRILGVPGLD-----TKEV 145 (396) T ss_pred -----------------------hh-----------------------hcccc----eeeeeeeccccccc-----cHHH Confidence 00 00000 01135677788763 3568 Q ss_pred HHHHHHHhhccccEEEEEcCCccccccccccCCHHHHHHHHhhccccchhhcccCcceEEEEcCeEEEecCcCCceeEec Q lcl|Aclame:pro 395 QKHAVSIGDERQDCLVMVSPPRSTVVNIPVTTAIDNLIAWREGSGNYNENNMNINTTYAVIDGNYKYQYDKYNDVNRWVP 474 (666) Q Consensus 395 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~p~~~~~d~~~~~~~~~p 474 (666) +++++++|++++ +++++|.|. .++++++++||+. ++|+|+++||||++++|+.++..+++| T Consensus 146 ~~al~~~~~~~~-~~~i~d~p~--------~~~~~~a~~~~~~----------~~s~~~~~~~p~~~~~d~~~~~~~~~p 206 (396) T protein:vir:60 146 AVALASVCQKLR-AFGYISAWG--------CKTISEVKAYRQN----------FSQRELMVIWPDFLAWDTVASTTATAY 206 (396) T ss_pred HHHHHHHhccCC-eEEEEeCCC--------CCCHHHHHHHHhh----------cCCceEEEEeCceeeecccCCceeEEc Confidence 999999999876 467777653 4788999999974 578999999999999999999999999 Q ss_pred hHHHHHHHHHhhhhcCCceecccceecceeeeeee---eeecCChhHHhhhhhccceEEEEecCCeEEEEcceecCCCcc Q lcl|Aclame:pro 475 LAADIAGLCARTDAVSQPWMSPAGYNRGQIMNVVK---LAIEPRKAHRDRLYQAAINPVIGAGGEGFILMGDKTATTVPS 551 (666) Q Consensus 475 ~s~~~ag~~a~~d~~~g~~~span~~~~~i~g~~~---~~~~~~~~~~~~Ln~~gIn~i~~~~g~G~~~wG~rT~~~~~~ 551 (666) ||+++||++||+|.++|+|+||||+.+.++.+... ....+++.|++.||++|||++++ ++|+++||+||+++++ T Consensus 207 ~s~~~AG~~a~~d~~~g~~~spaN~~l~gi~~~~~~~~~~~~~~~~~~~~Ln~~gI~~~~~--~~G~~~wG~rT~~~d~- 283 (396) T protein:vir:60 207 ATARALGLRAKIDQEQGWHKTLSNVGVNGVTGISASVFWDLQESGTDADLLNESGVTTLIR--RDGFRFWGNRTCSDDP- 283 (396) T ss_pred hhHHHHHHHHHhhhccCcEeCcCCceecceeeceeecccccCCCcchhhhhhhcCcEEEEc--CCCEEEEcccccCCCc- Confidence 99999999999999999999999998776665432 23445788999999999999954 6899999999998764 Q ss_pred ccceeehhhHHHHHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHhcCCeeeeEEEEcccCCCHHHhhCCEEEEE Q lcl|Aclame:pro 552 PFDRINVRRLFNMLKKNIGDSSKYKLFENNDNFTRASFRMEVSQYLSTIRSLGGIYDFRVQCDTTNNTPDVIDRNEFVAS 631 (666) Q Consensus 552 ~~~~i~vrR~~~~i~~~~~~~~~~~v~epn~~~~~~~i~~~i~~~l~~l~~~gal~g~~v~~d~~~n~~~~i~~G~~~~~ 631 (666) +|+||++||||+||+++|++.++|+|||||++.+|++|+.+|+.||++||++|+|+||+|+||+++||+++|++|+|+++ T Consensus 284 ~~~~i~~rR~~~~i~~~i~~~~~~~v~e~n~~~~~~~i~~~i~~~l~~l~~~gal~g~~~~~d~~~nt~~~i~~G~~~~~ 363 (396) T protein:vir:60 284 LFLFENYTRTAQVLADTMAEAHMWAVDKPITATLIRDIVDGINAKFRELKTNGYIVDATCWFSEESNDAETLKAGKLYID 363 (396) T ss_pred ccceeehhhHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCceeceEEEEecCCCCHHHhhCCEEEEE Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred EEEEecCCccEEEEEEEEeecchhHHHHHHHHhcC Q lcl|Aclame:pro 632 MFIKPAKSINYIMLNFTAVATGSDFDEIIGPVNQA 666 (666) Q Consensus 632 i~~~p~~p~e~i~~~~~~~~~~~~~~e~~~~~~~~ 666 (666) |+++|++|+|||+|++++... .++++++.|+.= T Consensus 364 i~~~p~~pae~I~~~~~~~~~--~~~~~~~~~~~~ 396 (396) T protein:vir:60 364 YDYTPVPPLENLTLRQRITDK--YLANLVTSVNSN 396 (396) T ss_pred EEEEecCCcceEEEEEEEchH--HHHHHHHHhhcC Confidence 999999999999999998776 688999999888 No 21 >protein:vir:103993 Length: 390 # NCBI annotation: phage tail sheath protein # Family: family:all:115 # MgeID: mge:1665 # MgeName: phi52237 # Cross-refs: genbank:acc:YP_293729;genbank:gi:72537699;genbank:GeneID:3608123 Probab=100.00 E-value=1.7e-94 Score=534.68 Aligned_cols=380 Identities=15% Similarity=0.116 Sum_probs=310.3 Q ss_pred CceecCceEEEEe-cCCccccccCcCceEEEEeccCC-----CCCcCEEeCCHHHHHHHcCCcCCCchhHHHHHHHHHhC Q lcl|Aclame:pro 1 MTLLSPGFETKET-TLSTTIVQSATGRAALVGKFQWG-----PAFQIIQVTNEVELVNKFGQPDNNTADYFMSGANFLQY 74 (666) Q Consensus 1 ~~~~~PGVyvee~-~~~~~i~~v~tsv~~fvG~~~~G-----pv~~p~~i~s~~~~~~~fG~~~~~~~~~~~~~~~f~ng 74 (666) |+|.+|||||+|+ +++++|..+.|++.+|||+++++ |+++|++|+|+.+|...|| .+.++.+++..+|.|| T Consensus 2 ~~~~~~Gv~v~e~~~g~~~i~~~~tav~g~vg~a~~ad~~~~pln~pv~i~s~~~~~~~~g---~~gtL~~al~~~~~~g 78 (390) T protein:vir:10 2 PQDYHHGVRVIEINEGGRPIRSVSTAVLGVVCTAADADASAFPLNTPVLLTNVVAALGKAG---KKGTLRRTLDAIGKQT 78 (390) T ss_pred cccccCCeEEEEcCCCcccccccCcceeEEEEcccCcCccccccccceEeccHHHHHhhcC---CCceehhhhhhhcccc Confidence 7788999999999 58899999999999999999876 9999999999999999999 4678899999999999 Q ss_pred CCeEEEEEcccCcccccccccccccceeeecccccccccccceeeeccccccccccccccccccceeEEeeccccccccc Q lcl|Aclame:pro 75 GNDLRVVRVLNKEKAKNATALAGNIEFEITNEGSNYEVGDTIKIKHNRQDIETAGKVTKVDGDGKVKGVFIPTGKIIAHA 154 (666) Q Consensus 75 g~~~~vvRv~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~a 154 (666) |..||+||+..+.+.+...... ..+. ..... T Consensus 79 g~~~~vv~v~~~~~~~~~~~~~-------------------------------------ig~~-------~~~~~----- 109 (390) T protein:vir:10 79 KPLTVVVRVAEGKDADETTSNV-------------------------------------IGTV-------TPDGK----- 109 (390) T ss_pred CceEEEEEeccccccccccccc-------------------------------------cccc-------ccccc----- Confidence 9999999985432211000000 0000 00000 Q ss_pred cccceeeecccceeEEEeecccccceeeeeeeeeccceeeeeeccchhhccccceeeeeecccceeeeeeccccccccce Q lcl|Aclame:pro 155 KAIGVYPELDGDWTAEFTSSSGNGSAALSVTKIVTDSGLLLTDLETSRANITNQTFLTKLQKYDMPAVSAIYAGEIGNSL 234 (666) Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~A~~~g~~gn~i 234 (666) .. T Consensus 110 -----------------------------------------------------------------------~t------- 111 (390) T protein:vir:10 110 -----------------------------------------------------------------------YT------- 111 (390) T ss_pred -----------------------------------------------------------------------cc------- Confidence 00 Q ss_pred eeeeeccccccccccccccccccccccceeeeeeccCcCcccceeeecccccccceeeecccccccccccchhhhHhHhc Q lcl|Aclame:pro 235 EVEILARSAFKNTAPDLTMYPYGGERTAARNLIPYAPQNDNQYAFIVRRDGVVVESYVLSTLKGDKDVYGNSIYMDDFFG 314 (666) Q Consensus 235 ~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~et~~ls~~~~~~~~~~~~~~~~~~~~ 314 (666) |. +. ... T Consensus 112 --------------------------------------------------g~--~a------------------l~~--- 118 (390) T protein:vir:10 112 --------------------------------------------------GI--KA------------------LLA--- 118 (390) T ss_pred --------------------------------------------------hh--hh------------------hhh--- Confidence 00 00 000 Q ss_pred ccCceEEEEeccccccccceeeeecCcccccccccccccccccccchhhhhhhhhcchhhcCccEEecccCCCchhHHHH Q lcl|Aclame:pro 315 RGSSQYIYATAQGWVDGFSGIISLAGGVSANEATTGGVGADPFIGAMMQGWGLFAERESIHVNLLIAGACAGEGDAFSTV 394 (666) Q Consensus 315 ~~~s~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ll~~p~~~~~~~~~~~v 394 (666) ... . -...++++++|++. +.++ T Consensus 119 -~~~------------------------------------------------~----~~~~p~il~ap~~~-----~~~v 140 (390) T protein:vir:10 119 -AQG------------------------------------------------A----LGVKPRILAAPGLD-----TQPV 140 (390) T ss_pred -hhh------------------------------------------------h----hcceehhhcccccc-----hHHH Confidence 000 0 00123456666664 3458 Q ss_pred HHHHHHHhhccccEEEEEcCCccccccccccCCHHHHHHHHhhccccchhhcccCcceEEEEcCeEEEecCcCCceeEec Q lcl|Aclame:pro 395 QKHAVSIGDERQDCLVMVSPPRSTVVNIPVTTAIDNLIAWREGSGNYNENNMNINTTYAVIDGNYKYQYDKYNDVNRWVP 474 (666) Q Consensus 395 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~p~~~~~d~~~~~~~~~p 474 (666) +.+|+.+|++++. ++++|.| ..++.+++++||+. ++|+|+++||||++++|+.++..+++| T Consensus 141 ~~~l~~~a~~~~~-~aivD~p--------~~~t~~~a~~~~~~----------~~s~~~~~~~p~~~~~d~~~~~~~~~p 201 (390) T protein:vir:10 141 AAALAATAQSLRA-MAYVSAS--------GCKTKEEAAAYRKQ----------FGQREIMVIWPDWLGWDDTTNSTAVIP 201 (390) T ss_pred HHHHHHhhcccce-EEEEecC--------CCCCHHHHHHHhhc----------cCCceEEEEcCceEeecccCCcccccc Confidence 9999999998874 6777765 35688899999874 678999999999999999999999999 Q ss_pred hHHHHHHHHHhhhhcCCceecccceecceeeeeee---eeecCChhHHhhhhhccceEEEEecCCeEEEEcceecCCCcc Q lcl|Aclame:pro 475 LAADIAGLCARTDAVSQPWMSPAGYNRGQIMNVVK---LAIEPRKAHRDRLYQAAINPVIGAGGEGFILMGDKTATTVPS 551 (666) Q Consensus 475 ~s~~~ag~~a~~d~~~g~~~span~~~~~i~g~~~---~~~~~~~~~~~~Ln~~gIn~i~~~~g~G~~~wG~rT~~~~~~ 551 (666) ||+++||+++|+|.++||||||||+.+.++.+... ........|.+.||++||+++++ ++||++||+||++.+ + T Consensus 202 ~s~~~Agl~a~~D~~~g~~~spaN~~l~gi~~~~~~~~~~~~~~~~~~~~ln~~gi~t~~~--~~G~~~wG~rT~s~d-~ 278 (390) T protein:vir:10 202 APAIAAGLRAKIDNDIGWHKTISNVVVNGVSGISADVSWDLQDPATDAGYLNEHEVTTLVN--RNGFRFWGERTCSDD-P 278 (390) T ss_pred hHHHHHHHHHHhhcCCCcEECcCCceeeceeecceecccccccccchhhhhhhcCcEEEEc--CCCEEEEcccccCCC-c Confidence 99999999999999999999999998776665422 22334566789999999999965 579999999999876 5 Q ss_pred ccceeehhhHHHHHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHhcCCeeeeEEEEcccCCCHHHhhCCEEEEE Q lcl|Aclame:pro 552 PFDRINVRRLFNMLKKNIGDSSKYKLFENNDNFTRASFRMEVSQYLSTIRSLGGIYDFRVQCDTTNNTPDVIDRNEFVAS 631 (666) Q Consensus 552 ~~~~i~vrR~~~~i~~~~~~~~~~~v~epn~~~~~~~i~~~i~~~l~~l~~~gal~g~~v~~d~~~n~~~~i~~G~~~~~ 631 (666) +|+||++||||+||+++|++.++|+|||||++.+|++|+++++.||++||++|+|+||+|+||+++||++||++|+|+++ T Consensus 279 ~~~~i~~rR~~~~i~~~i~~~~~~~v~e~n~~~~~~~i~~~i~~~L~~l~~~g~l~g~~v~~d~~~nt~~~i~~G~~~~~ 358 (390) T protein:vir:10 279 KFAFENYTRTAQVAGDSIAEAQMPVVDGPLNPSLARDIVESINGWFRQQVANGYLIGGSAWIDPEPNTADILASGKAYID 358 (390) T ss_pred ccceeehhhHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeEEEEccCCCCHHHhhCCeEEEE Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred EEEEecCCccEEEEEEEEeecchhHHHHHHHHhc Q lcl|Aclame:pro 632 MFIKPAKSINYIMLNFTAVATGSDFDEIIGPVNQ 665 (666) Q Consensus 632 i~~~p~~p~e~i~~~~~~~~~~~~~~e~~~~~~~ 665 (666) |+++|++|+|||+|++++... .++++++.|++ T Consensus 359 v~~~p~~pae~I~~~~~~~~~--~~~~~~~~~~~ 390 (390) T protein:vir:10 359 YDYTPVPPLENLVLRQRITDR--FLADFPARVAG 390 (390) T ss_pred EEEEecCCcceEEEEEEEchH--HHHHHHHHhcC Confidence 999999999999999997766 69999999999 No 22 >protein:vir:78206 Length: 390 # NCBI annotation: gp33, phage tail sheath protein # Family: family:all:115 # MgeID: mge:1848 # MgeName: phiE12-2 # Cross-refs: genbank:acc:YP_001111183;genbank:gi:134288694;genbank:GeneID:4960666 Probab=100.00 E-value=1.7e-94 Score=534.68 Aligned_cols=380 Identities=15% Similarity=0.116 Sum_probs=310.3 Q ss_pred CceecCceEEEEe-cCCccccccCcCceEEEEeccCC-----CCCcCEEeCCHHHHHHHcCCcCCCchhHHHHHHHHHhC Q lcl|Aclame:pro 1 MTLLSPGFETKET-TLSTTIVQSATGRAALVGKFQWG-----PAFQIIQVTNEVELVNKFGQPDNNTADYFMSGANFLQY 74 (666) Q Consensus 1 ~~~~~PGVyvee~-~~~~~i~~v~tsv~~fvG~~~~G-----pv~~p~~i~s~~~~~~~fG~~~~~~~~~~~~~~~f~ng 74 (666) |+|.+|||||+|+ +++++|..+.|++.+|||+++++ |+++|++|+|+.+|...|| .+.++.+++..+|.|| T Consensus 2 ~~~~~~Gv~v~e~~~g~~~i~~~~tav~g~vg~a~~ad~~~~pln~pv~i~s~~~~~~~~g---~~gtL~~al~~~~~~g 78 (390) T protein:vir:78 2 PQDYHHGVRVIEINEGGRPIRSVSTAVLGVVCTAADADASAFPLNTPVLLTNVVAALGKAG---KKGTLRRTLDAIGKQT 78 (390) T ss_pred cccccCCeEEEEcCCCcccccccCcceeEEEEcccCcCccccccccceEeccHHHHHhhcC---CCceehhhhhhhcccc Confidence 7788999999999 58899999999999999999876 9999999999999999999 4678899999999999 Q ss_pred CCeEEEEEcccCcccccccccccccceeeecccccccccccceeeeccccccccccccccccccceeEEeeccccccccc Q lcl|Aclame:pro 75 GNDLRVVRVLNKEKAKNATALAGNIEFEITNEGSNYEVGDTIKIKHNRQDIETAGKVTKVDGDGKVKGVFIPTGKIIAHA 154 (666) Q Consensus 75 g~~~~vvRv~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~a 154 (666) |..||+||+..+.+.+...... ..+. ..... T Consensus 79 g~~~~vv~v~~~~~~~~~~~~~-------------------------------------ig~~-------~~~~~----- 109 (390) T protein:vir:78 79 KPLTVVVRVAEGKDADETTSNV-------------------------------------IGTV-------TPDGK----- 109 (390) T ss_pred CceEEEEEeccccccccccccc-------------------------------------cccc-------ccccc----- Confidence 9999999985432211000000 0000 00000 Q ss_pred cccceeeecccceeEEEeecccccceeeeeeeeeccceeeeeeccchhhccccceeeeeecccceeeeeeccccccccce Q lcl|Aclame:pro 155 KAIGVYPELDGDWTAEFTSSSGNGSAALSVTKIVTDSGLLLTDLETSRANITNQTFLTKLQKYDMPAVSAIYAGEIGNSL 234 (666) Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~A~~~g~~gn~i 234 (666) .. T Consensus 110 -----------------------------------------------------------------------~t------- 111 (390) T protein:vir:78 110 -----------------------------------------------------------------------YT------- 111 (390) T ss_pred -----------------------------------------------------------------------cc------- Confidence 00 Q ss_pred eeeeeccccccccccccccccccccccceeeeeeccCcCcccceeeecccccccceeeecccccccccccchhhhHhHhc Q lcl|Aclame:pro 235 EVEILARSAFKNTAPDLTMYPYGGERTAARNLIPYAPQNDNQYAFIVRRDGVVVESYVLSTLKGDKDVYGNSIYMDDFFG 314 (666) Q Consensus 235 ~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~et~~ls~~~~~~~~~~~~~~~~~~~~ 314 (666) |. +. ... T Consensus 112 --------------------------------------------------g~--~a------------------l~~--- 118 (390) T protein:vir:78 112 --------------------------------------------------GI--KA------------------LLA--- 118 (390) T ss_pred --------------------------------------------------hh--hh------------------hhh--- Confidence 00 00 000 Q ss_pred ccCceEEEEeccccccccceeeeecCcccccccccccccccccccchhhhhhhhhcchhhcCccEEecccCCCchhHHHH Q lcl|Aclame:pro 315 RGSSQYIYATAQGWVDGFSGIISLAGGVSANEATTGGVGADPFIGAMMQGWGLFAERESIHVNLLIAGACAGEGDAFSTV 394 (666) Q Consensus 315 ~~~s~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ll~~p~~~~~~~~~~~v 394 (666) ... . -...++++++|++. +.++ T Consensus 119 -~~~------------------------------------------------~----~~~~p~il~ap~~~-----~~~v 140 (390) T protein:vir:78 119 -AQG------------------------------------------------A----LGVKPRILAAPGLD-----TQPV 140 (390) T ss_pred -hhh------------------------------------------------h----hcceehhhcccccc-----hHHH Confidence 000 0 00123456666664 3458 Q ss_pred HHHHHHHhhccccEEEEEcCCccccccccccCCHHHHHHHHhhccccchhhcccCcceEEEEcCeEEEecCcCCceeEec Q lcl|Aclame:pro 395 QKHAVSIGDERQDCLVMVSPPRSTVVNIPVTTAIDNLIAWREGSGNYNENNMNINTTYAVIDGNYKYQYDKYNDVNRWVP 474 (666) Q Consensus 395 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~p~~~~~d~~~~~~~~~p 474 (666) +.+|+.+|++++. ++++|.| ..++.+++++||+. ++|+|+++||||++++|+.++..+++| T Consensus 141 ~~~l~~~a~~~~~-~aivD~p--------~~~t~~~a~~~~~~----------~~s~~~~~~~p~~~~~d~~~~~~~~~p 201 (390) T protein:vir:78 141 AAALAATAQSLRA-MAYVSAS--------GCKTKEEAAAYRKQ----------FGQREIMVIWPDWLGWDDTTNSTAVIP 201 (390) T ss_pred HHHHHHhhcccce-EEEEecC--------CCCCHHHHHHHhhc----------cCCceEEEEcCceEeecccCCcccccc Confidence 9999999998874 6777765 35688899999874 678999999999999999999999999 Q ss_pred hHHHHHHHHHhhhhcCCceecccceecceeeeeee---eeecCChhHHhhhhhccceEEEEecCCeEEEEcceecCCCcc Q lcl|Aclame:pro 475 LAADIAGLCARTDAVSQPWMSPAGYNRGQIMNVVK---LAIEPRKAHRDRLYQAAINPVIGAGGEGFILMGDKTATTVPS 551 (666) Q Consensus 475 ~s~~~ag~~a~~d~~~g~~~span~~~~~i~g~~~---~~~~~~~~~~~~Ln~~gIn~i~~~~g~G~~~wG~rT~~~~~~ 551 (666) ||+++||+++|+|.++||||||||+.+.++.+... ........|.+.||++||+++++ ++||++||+||++.+ + T Consensus 202 ~s~~~Agl~a~~D~~~g~~~spaN~~l~gi~~~~~~~~~~~~~~~~~~~~ln~~gi~t~~~--~~G~~~wG~rT~s~d-~ 278 (390) T protein:vir:78 202 APAIAAGLRAKIDNDIGWHKTISNVVVNGVSGISADVSWDLQDPATDAGYLNEHEVTTLVN--RNGFRFWGERTCSDD-P 278 (390) T ss_pred hHHHHHHHHHHhhcCCCcEECcCCceeeceeecceecccccccccchhhhhhhcCcEEEEc--CCCEEEEcccccCCC-c Confidence 99999999999999999999999998776665422 22334566789999999999965 579999999999876 5 Q ss_pred ccceeehhhHHHHHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHhcCCeeeeEEEEcccCCCHHHhhCCEEEEE Q lcl|Aclame:pro 552 PFDRINVRRLFNMLKKNIGDSSKYKLFENNDNFTRASFRMEVSQYLSTIRSLGGIYDFRVQCDTTNNTPDVIDRNEFVAS 631 (666) Q Consensus 552 ~~~~i~vrR~~~~i~~~~~~~~~~~v~epn~~~~~~~i~~~i~~~l~~l~~~gal~g~~v~~d~~~n~~~~i~~G~~~~~ 631 (666) +|+||++||||+||+++|++.++|+|||||++.+|++|+++++.||++||++|+|+||+|+||+++||++||++|+|+++ T Consensus 279 ~~~~i~~rR~~~~i~~~i~~~~~~~v~e~n~~~~~~~i~~~i~~~L~~l~~~g~l~g~~v~~d~~~nt~~~i~~G~~~~~ 358 (390) T protein:vir:78 279 KFAFENYTRTAQVAGDSIAEAQMPVVDGPLNPSLARDIVESINGWFRQQVANGYLIGGSAWIDPEPNTADILASGKAYID 358 (390) T ss_pred ccceeehhhHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeEEEEccCCCCHHHhhCCeEEEE Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred EEEEecCCccEEEEEEEEeecchhHHHHHHHHhc Q lcl|Aclame:pro 632 MFIKPAKSINYIMLNFTAVATGSDFDEIIGPVNQ 665 (666) Q Consensus 632 i~~~p~~p~e~i~~~~~~~~~~~~~~e~~~~~~~ 665 (666) |+++|++|+|||+|++++... .++++++.|++ T Consensus 359 v~~~p~~pae~I~~~~~~~~~--~~~~~~~~~~~ 390 (390) T protein:vir:78 359 YDYTPVPPLENLVLRQRITDR--FLADFPARVAG 390 (390) T ss_pred EEEEecCCcceEEEEEEEchH--HHHHHHHHhcC Confidence 999999999999999997766 69999999999 No 23 >protein:vir:5711 Length: 396 # NCBI annotation: gpFI # Family: family:all:115 # MgeID: mge:120 # MgeName: L-413C # Cross-refs: genbank:acc:NP_839870;genbank:gi:30065725;genbank:GeneID:1260618 Probab=100.00 E-value=5.9e-94 Score=531.72 Aligned_cols=387 Identities=14% Similarity=0.120 Sum_probs=312.2 Q ss_pred CceecCceEEEEec-CCccccccCcCceEEEEeccCC-----CCCcCEEeCCHHHHHHHcCCcCCCchhHHHHHHHHHhC Q lcl|Aclame:pro 1 MTLLSPGFETKETT-LSTTIVQSATGRAALVGKFQWG-----PAFQIIQVTNEVELVNKFGQPDNNTADYFMSGANFLQY 74 (666) Q Consensus 1 ~~~~~PGVyvee~~-~~~~i~~v~tsv~~fvG~~~~G-----pv~~p~~i~s~~~~~~~fG~~~~~~~~~~~~~~~f~ng 74 (666) |++-+|||||+|++ ++++|.++.|++++|||+++++ |.++|++|+|+.||.+.||. ..++.+++..+|.|| T Consensus 1 m~~~~~GV~v~e~~~g~~~i~~v~tav~~~vg~a~~~d~~~~~~~~pv~i~s~~~~~~~~g~---~~tl~~al~~~~~~~ 77 (396) T protein:vir:57 1 MSDYHHGVQVLEINDGTRVISTVSTAIVGMVCTASDADAETFPLNKPVLITNVQSAIAKAGK---KGTLAASLQAIADQS 77 (396) T ss_pred CCCCCCceEEEEcCCCcccccccCCceEEEEEeccCCCcccccCccCeEeecchhhhhhccc---ccchHHHHHHhhhcC Confidence 99999999999995 8899999999999999999986 78999999999999999984 568899999999999 Q ss_pred CCeEEEEEcccCcccccccccccccceeeecccccccccccceeeeccccccccccccccccccceeEEeeccccccccc Q lcl|Aclame:pro 75 GNDLRVVRVLNKEKAKNATALAGNIEFEITNEGSNYEVGDTIKIKHNRQDIETAGKVTKVDGDGKVKGVFIPTGKIIAHA 154 (666) Q Consensus 75 g~~~~vvRv~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~a 154 (666) |..||++|+..+......... ..+. T Consensus 78 ~~~~~vv~~~~~~~~~~~~~~-------------------------------------------------a~t~------ 102 (396) T protein:vir:57 78 KPVTVVVRVEDGTGDDEETKL-------------------------------------------------AQTV------ 102 (396) T ss_pred CceeEeeeccccccccccccc-------------------------------------------------cccc------ Confidence 999999987442211100000 0000 Q ss_pred cccceeeecccceeEEEeecccccceeeeeeeeeccceeeeeeccchhhccccceeeeeecccceeeeeeccccccccce Q lcl|Aclame:pro 155 KAIGVYPELDGDWTAEFTSSSGNGSAALSVTKIVTDSGLLLTDLETSRANITNQTFLTKLQKYDMPAVSAIYAGEIGNSL 234 (666) Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~A~~~g~~gn~i 234 (666) .. +. | T Consensus 103 --------------~~---------------------------------------------------ii----G------ 107 (396) T protein:vir:57 103 --------------SN---------------------------------------------------II----G------ 107 (396) T ss_pred --------------ee---------------------------------------------------ee----e------ Confidence 00 00 0 Q ss_pred eeeeeccccccccccccccccccccccceeeeeeccCcCcccceeeecccccccceeeecccccccccccchhhhHhHhc Q lcl|Aclame:pro 235 EVEILARSAFKNTAPDLTMYPYGGERTAARNLIPYAPQNDNQYAFIVRRDGVVVESYVLSTLKGDKDVYGNSIYMDDFFG 314 (666) Q Consensus 235 ~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~et~~ls~~~~~~~~~~~~~~~~~~~~ 314 (666) .... . . ...|. .. +. T Consensus 108 --~~~~--------------------------------~-~------~~tgl-----------------------~a-l~ 122 (396) T protein:vir:57 108 --TTDE--------------------------------N-G------QYTGL-----------------------KA-LM 122 (396) T ss_pred --eccc--------------------------------c-c------cchhh-----------------------hh-hh Confidence 0000 0 0 00000 00 00 Q ss_pred ccCceEEEEeccccccccceeeeecCcccccccccccccccccccchhhhhhhhhcchhhcCccEEecccCCCchhHHHH Q lcl|Aclame:pro 315 RGSSQYIYATAQGWVDGFSGIISLAGGVSANEATTGGVGADPFIGAMMQGWGLFAERESIHVNLLIAGACAGEGDAFSTV 394 (666) Q Consensus 315 ~~~s~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ll~~p~~~~~~~~~~~v 394 (666) ..... + ...++++++|++. ...+ T Consensus 123 ~~~~~------------------------------------------------~----~~~p~i~~ap~~~-----~~~v 145 (396) T protein:vir:57 123 GAESV------------------------------------------------T----GVKPRILGVPGLD-----TKEV 145 (396) T ss_pred hcccc------------------------------------------------e----eEEeccccCcccc-----hhHH Confidence 00000 0 0124456666653 3568 Q ss_pred HHHHHHHhhccccEEEEEcCCccccccccccCCHHHHHHHHhhccccchhhcccCcceEEEEcCeEEEecCcCCceeEec Q lcl|Aclame:pro 395 QKHAVSIGDERQDCLVMVSPPRSTVVNIPVTTAIDNLIAWREGSGNYNENNMNINTTYAVIDGNYKYQYDKYNDVNRWVP 474 (666) Q Consensus 395 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~p~~~~~d~~~~~~~~~p 474 (666) +.+|..+|+++ .+++++|+|. +++++++++||+. ++|.|+++||||++++|+.++..+++| T Consensus 146 ~~al~~~~~~~-~~~~~~d~p~--------~~~~~~~~~~~~~----------~~s~~~~~~~p~~~~~d~~~~~~~~~p 206 (396) T protein:vir:57 146 AVALASVCQEL-NAFGYISAWG--------CKTISEVKAYRQN----------FSQRELMVIWPDFLAWDTVTSTTATAY 206 (396) T ss_pred HHHHHHHhhhC-ceEEEEcCCC--------CCCHHHHHHHHhc----------cCCceEEEEcceeeeecccCCceeEEe Confidence 89999999876 5678877764 4678999999974 678999999999999999999999999 Q ss_pred hHHHHHHHHHhhhhcCCceecccceecceeeeee---eeeecCChhHHhhhhhccceEEEEecCCeEEEEcceecCCCcc Q lcl|Aclame:pro 475 LAADIAGLCARTDAVSQPWMSPAGYNRGQIMNVV---KLAIEPRKAHRDRLYQAAINPVIGAGGEGFILMGDKTATTVPS 551 (666) Q Consensus 475 ~s~~~ag~~a~~d~~~g~~~span~~~~~i~g~~---~~~~~~~~~~~~~Ln~~gIn~i~~~~g~G~~~wG~rT~~~~~~ 551 (666) ||+++||++||+|.++|+||||||+.+.++.+.. ..+...++.|++.||++||||+++ ++||++||+||++++ + T Consensus 207 ~s~~~Ag~~a~~d~~~g~~~spaN~~l~gi~~~~~~~~~~~~~~~~~~~~Ln~~gi~t~~~--~~G~~~wG~rT~~~d-~ 283 (396) T protein:vir:57 207 ATARALGLRAKIDQEQGWHKTLSNVGVNGVTGISASVFWDLQKPGTDADLLNEAGVTTLVR--RDGFRFWGNRTCSDD-P 283 (396) T ss_pred hhHHHHHHHHHhhhccCcEeccCCceeccccccceecccccCCcchhhhhhhhcCcEEEEc--CCCEEEEcccccCCC-c Confidence 9999999999999999999999999877665542 223445678999999999999965 679999999999876 4 Q ss_pred ccceeehhhHHHHHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHhcCCeeeeEEEEcccCCCHHHhhCCEEEEE Q lcl|Aclame:pro 552 PFDRINVRRLFNMLKKNIGDSSKYKLFENNDNFTRASFRMEVSQYLSTIRSLGGIYDFRVQCDTTNNTPDVIDRNEFVAS 631 (666) Q Consensus 552 ~~~~i~vrR~~~~i~~~~~~~~~~~v~epn~~~~~~~i~~~i~~~l~~l~~~gal~g~~v~~d~~~n~~~~i~~G~~~~~ 631 (666) +|+||++|||++||+++|++.++|+|||||++.+|++|+++|+.||++||++|+|+||+|+||+++||+++|++|+|+++ T Consensus 284 ~~~~i~vrR~~~~i~~~i~~~~~~~v~e~n~~~~~~~i~~~i~~~l~~l~~~gal~g~~v~~d~~~n~~~~i~~G~~~~~ 363 (396) T protein:vir:57 284 LFLFESYTRTAQVLADTMAEAHMWAIDKPITATLIRDIIDGINAKFRELKNNGYIVDGTCWFSEESNDAETLKAGKLYID 363 (396) T ss_pred ccceeehhhHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCceeceEEEEecCCCCHHHhhCCeEEEE Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred EEEEecCCccEEEEEEEEeecchhHHHHHHHHhcC Q lcl|Aclame:pro 632 MFIKPAKSINYIMLNFTAVATGSDFDEIIGPVNQA 666 (666) Q Consensus 632 i~~~p~~p~e~i~~~~~~~~~~~~~~e~~~~~~~~ 666 (666) |+++|++|+|||+|++++... .++++++.|++- T Consensus 364 v~~~p~~p~e~I~~~~~~~~~--~~~~~~~~~~~~ 396 (396) T protein:vir:57 364 YDYTPVPPLENLTLRQRITSR--YLASLVTSVNSN 396 (396) T ss_pred EEEEecCCcceEEEEEEEchH--HHHHHHHHhhcC Confidence 999999999999999998776 689999999877 No 24 >protein:vir:79141 Length: 391 # NCBI annotation: major tail seath protein gpFI # Family: family:all:115 # MgeID: mge:1863 # MgeName: RSA1 # Cross-refs: genbank:acc:YP_001165276;genbank:gi:145708101;genbank:GeneID:5247152 Probab=100.00 E-value=1.4e-94 Score=535.20 Aligned_cols=381 Identities=14% Similarity=0.116 Sum_probs=308.0 Q ss_pred CceecCceEEEEe-cCCccccccCcCceEEEEecc-----CCCCCcCEEeCCHHHHHHHcCCcCCCchhHHHHHHHHHhC Q lcl|Aclame:pro 1 MTLLSPGFETKET-TLSTTIVQSATGRAALVGKFQ-----WGPAFQIIQVTNEVELVNKFGQPDNNTADYFMSGANFLQY 74 (666) Q Consensus 1 ~~~~~PGVyvee~-~~~~~i~~v~tsv~~fvG~~~-----~Gpv~~p~~i~s~~~~~~~fG~~~~~~~~~~~~~~~f~ng 74 (666) |++.+|||||+|+ +++++|.+++|++++|||+++ .+|+|+|++|+|+.||...||. ..++.+++..+|.|| T Consensus 2 ~~~~~pGv~v~e~~~~~~~i~~~~tav~~~vg~a~~a~~~~~p~n~pv~iss~~~~~~~~g~---~gtl~~al~~~~~~g 78 (391) T protein:vir:79 2 PTDYHHGVRVVELNDGTRPIRTIETAVAGIVCTADDADAATFPLDTPVLLTNPQAYIGKAGD---KGTLAHTLDAITDQT 78 (391) T ss_pred CCCCCCCeEEEECCCCcccccccCCceEEEEeecccccccccccccCEEeccHHHHHHhcCC---ccccchhhhhhhccc Confidence 8888999999999 588999999999999999987 6899999999999999999994 567888999999999 Q ss_pred CCeEEEEEcccCcccccccccccccceeeecccccccccccceeeeccccccccccccccccccceeEEeeccccccccc Q lcl|Aclame:pro 75 GNDLRVVRVLNKEKAKNATALAGNIEFEITNEGSNYEVGDTIKIKHNRQDIETAGKVTKVDGDGKVKGVFIPTGKIIAHA 154 (666) Q Consensus 75 g~~~~vvRv~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~a 154 (666) |..||+|++.......... .. T Consensus 79 g~~~~vv~~~~~~~~~~~~------------------------------------------------------~~----- 99 (391) T protein:vir:79 79 NPLTVVVRVAGGASEAETT------------------------------------------------------SN----- 99 (391) T ss_pred ccceeeecccccccccccc------------------------------------------------------cc----- Confidence 9999999874321100000 00 Q ss_pred cccceeeecccceeEEEeecccccceeeeeeeeeccceeeeeeccchhhccccceeeeeecccceeeeeeccccccccce Q lcl|Aclame:pro 155 KAIGVYPELDGDWTAEFTSSSGNGSAALSVTKIVTDSGLLLTDLETSRANITNQTFLTKLQKYDMPAVSAIYAGEIGNSL 234 (666) Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~A~~~g~~gn~i 234 (666) . .+.. . ..... T Consensus 100 -----------------------------~---------------------~g~~--~---------~~~~~-------- 110 (391) T protein:vir:79 100 -----------------------------L---------------------IGTT--N---------AAGRY-------- 110 (391) T ss_pred -----------------------------c---------------------cccc--c---------chhhh-------- Confidence 0 0000 0 00000 Q ss_pred eeeeeccccccccccccccccccccccceeeeeeccCcCcccceeeecccccccceeeecccccccccccchhhhHhHhc Q lcl|Aclame:pro 235 EVEILARSAFKNTAPDLTMYPYGGERTAARNLIPYAPQNDNQYAFIVRRDGVVVESYVLSTLKGDKDVYGNSIYMDDFFG 314 (666) Q Consensus 235 ~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~et~~ls~~~~~~~~~~~~~~~~~~~~ 314 (666) .|. .. +. T Consensus 111 -------------------------------------------------tGl-----------------------~~-l~ 117 (391) T protein:vir:79 111 -------------------------------------------------TGM-----------------------KA-LL 117 (391) T ss_pred -------------------------------------------------HHH-----------------------hh-hh Confidence 000 00 00 Q ss_pred ccCceEEEEeccccccccceeeeecCcccccccccccccccccccchhhhhhhhhcchhhcCccEEecccCCCchhHHHH Q lcl|Aclame:pro 315 RGSSQYIYATAQGWVDGFSGIISLAGGVSANEATTGGVGADPFIGAMMQGWGLFAERESIHVNLLIAGACAGEGDAFSTV 394 (666) Q Consensus 315 ~~~s~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ll~~p~~~~~~~~~~~v 394 (666) .... .. ...+.++++|++. ...+ T Consensus 118 ~~~~---------------------------------------------~~-------~~~p~~l~~p~~~-----~~~v 140 (391) T protein:vir:79 118 TARN---------------------------------------------RF-------GVAPRILAVPGLD-----SLPV 140 (391) T ss_pred hhhh---------------------------------------------hh-------cccchhhcCCccc-----hhHH Confidence 0000 00 0013344555553 3568 Q ss_pred HHHHHHHhhccccEEEEEcCCccccccccccCCHHHHHHHHhhccccchhhcccCcceEEEEcCeEEEecCcCCceeEec Q lcl|Aclame:pro 395 QKHAVSIGDERQDCLVMVSPPRSTVVNIPVTTAIDNLIAWREGSGNYNENNMNINTTYAVIDGNYKYQYDKYNDVNRWVP 474 (666) Q Consensus 395 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~p~~~~~d~~~~~~~~~p 474 (666) +.+++.+|+++++ ++++|.| ..++.+++++|++. ++|+|+++||||++++|+.++..+++| T Consensus 141 ~~al~~~~~~~~~-~ai~d~p--------~~~t~~~a~~~~~~----------~~s~~~a~~~P~~~~~d~~~~~~~~~p 201 (391) T protein:vir:79 141 GTELVTIAQKLRA-FAYLSAY--------GCQTKEEAVAYRSN----------FGQREAMVMWPDFVGWDTAANAETTLW 201 (391) T ss_pred HHHHHHHHhhcCc-EEEEECC--------CCCCHHHHHHHHhc----------cCCceeEEecceeeeecCcCCceeeec Confidence 8999999999875 5666665 35678899999974 678999999999999999999999999 Q ss_pred hHHHHHHHHHhhhhcCCceecccceecceeeeeee---eeecCChhHHhhhhhccceEEEEecCCeEEEEcceecCCCcc Q lcl|Aclame:pro 475 LAADIAGLCARTDAVSQPWMSPAGYNRGQIMNVVK---LAIEPRKAHRDRLYQAAINPVIGAGGEGFILMGDKTATTVPS 551 (666) Q Consensus 475 ~s~~~ag~~a~~d~~~g~~~span~~~~~i~g~~~---~~~~~~~~~~~~Ln~~gIn~i~~~~g~G~~~wG~rT~~~~~~ 551 (666) ||+++||++||+|.++||||||+|+.+.++.+... ........|.+.||++||+|+++ ++||++||+||++++ + T Consensus 202 ~s~~~AG~~a~~D~~~g~~~spaN~~l~gi~~~~~~~~~~~~~~~~~~~~Ln~~~I~t~~~--~~G~~~wG~rT~~~d-~ 278 (391) T protein:vir:79 202 ATARAVGLRAKIDNDTGWHKTLSNVAVGGVTGLSRDVFWDLQDPATDAGYLNANEVTTLVH--RDGYRFWGSRTCSAD-P 278 (391) T ss_pred hHHHHHHHHHHhhhcccceeccCCceehhhhccccccccccccccchhhhhhhcCceEEEC--CCcEEEEcccccCCC-c Confidence 99999999999999999999999998765544322 12334456788999999999864 689999999999876 5 Q ss_pred ccceeehhhHHHHHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHhcCCeeeeEEEEcccCCCHHHhhCCEEEEE Q lcl|Aclame:pro 552 PFDRINVRRLFNMLKKNIGDSSKYKLFENNDNFTRASFRMEVSQYLSTIRSLGGIYDFRVQCDTTNNTPDVIDRNEFVAS 631 (666) Q Consensus 552 ~~~~i~vrR~~~~i~~~~~~~~~~~v~epn~~~~~~~i~~~i~~~l~~l~~~gal~g~~v~~d~~~n~~~~i~~G~~~~~ 631 (666) +|+||++|||++||+++|++.++|+|||||++.+|++|+++++.||++||++|+|+||+|+||+++||+++|++|+|+++ T Consensus 279 ~~~~i~~rR~~~~i~~~i~~~~~~~v~epn~~~~~~~i~~~i~~~l~~l~~~g~l~g~~v~~~~~~nt~~~i~~G~~~~~ 358 (391) T protein:vir:79 279 LFAFENYTRTAQVLADTMAEAHMWANDLPMTPTLVRDLLEGINAKLRMLTRNGYLLGGAAWFDADANSKDTLKAGQLAID 358 (391) T ss_pred ccceeehhhHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCceeceEEEEecCCCCHHHhhCCEEEEE Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred EEEEecCCccEEEEEEEEeecchhHHHHHHHHhcC Q lcl|Aclame:pro 632 MFIKPAKSINYIMLNFTAVATGSDFDEIIGPVNQA 666 (666) Q Consensus 632 i~~~p~~p~e~i~~~~~~~~~~~~~~e~~~~~~~~ 666 (666) |+++|++|+|||+|+++.... .++++++.|.+| T Consensus 359 i~~~p~~p~e~i~~~~~~~~~--~~~~~~~~v~~a 391 (391) T protein:vir:79 359 YDYTPVPPLENLTFRQRITDR--YLMQFAEAVKAA 391 (391) T ss_pred EEEEecCCcceEEEEEEEchH--HHHHHHHHhhcC Confidence 999999999999999997766 689999999999 No 25 >protein:vir:79181 Length: 390 # NCBI annotation: gp30, phage tail sheath protein # Family: family:all:115 # MgeID: mge:1866 # MgeName: phiE202 # Cross-refs: genbank:acc:YP_001111061;genbank:gi:134288772;genbank:GeneID:4960700 Probab=100.00 E-value=2.1e-94 Score=534.21 Aligned_cols=380 Identities=14% Similarity=0.110 Sum_probs=309.6 Q ss_pred CceecCceEEEEe-cCCccccccCcCceEEEEeccCC-----CCCcCEEeCCHHHHHHHcCCcCCCchhHHHHHHHHHhC Q lcl|Aclame:pro 1 MTLLSPGFETKET-TLSTTIVQSATGRAALVGKFQWG-----PAFQIIQVTNEVELVNKFGQPDNNTADYFMSGANFLQY 74 (666) Q Consensus 1 ~~~~~PGVyvee~-~~~~~i~~v~tsv~~fvG~~~~G-----pv~~p~~i~s~~~~~~~fG~~~~~~~~~~~~~~~f~ng 74 (666) |++.+|||||+|+ +++++|..++|++.+|+|+++++ |+++|++|+|+.+|.+.|| .+.++.+++..+|.|| T Consensus 2 ~~~~~~Gv~v~e~~~~~~~i~~~~tav~~~vg~a~dad~~~~p~n~pv~its~~~~~~~~g---~~~tL~~al~~~~~~~ 78 (390) T protein:vir:79 2 PQDYHHGVRVIEINEGGRPIRSVSTAVLGVVCTAADADASAFPLNTPVLLTNVVAALGKAG---KKGTLRRTLDAIGKQT 78 (390) T ss_pred ccccCCCeEEEEcCCCcccccccCCceeEEEEecCCCCccccccccceEeecHHHHHHhcC---CCccchhhhhhhcccc Confidence 8899999999999 57899999999999999999987 9999999999999999999 4667888999999999 Q ss_pred CCeEEEEEcccCcccccccccccccceeeecccccccccccceeeeccccccccccccccccccceeEEeeccccccccc Q lcl|Aclame:pro 75 GNDLRVVRVLNKEKAKNATALAGNIEFEITNEGSNYEVGDTIKIKHNRQDIETAGKVTKVDGDGKVKGVFIPTGKIIAHA 154 (666) Q Consensus 75 g~~~~vvRv~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~a 154 (666) |+.||+||+..+.+..... .. T Consensus 79 ~~~~~vv~v~~~~~~~~~~------------------------------------------------------~~----- 99 (390) T protein:vir:79 79 KPLTVVVRVAEGKDADETT------------------------------------------------------SN----- 99 (390) T ss_pred cceEEEEeecccccccccc------------------------------------------------------ce----- Confidence 9999999984321110000 00 Q ss_pred cccceeeecccceeEEEeecccccceeeeeeeeeccceeeeeeccchhhccccceeeeeecccceeeeeeccccccccce Q lcl|Aclame:pro 155 KAIGVYPELDGDWTAEFTSSSGNGSAALSVTKIVTDSGLLLTDLETSRANITNQTFLTKLQKYDMPAVSAIYAGEIGNSL 234 (666) Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~A~~~g~~gn~i 234 (666) ...... . T Consensus 100 -------------------------------------------------------------------~ig~~~-~----- 106 (390) T protein:vir:79 100 -------------------------------------------------------------------VIGTVT-P----- 106 (390) T ss_pred -------------------------------------------------------------------eeeccc-c----- Confidence 000000 0 Q ss_pred eeeeeccccccccccccccccccccccceeeeeeccCcCcccceeeecccccccceeeecccccccccccchhhhHhHhc Q lcl|Aclame:pro 235 EVEILARSAFKNTAPDLTMYPYGGERTAARNLIPYAPQNDNQYAFIVRRDGVVVESYVLSTLKGDKDVYGNSIYMDDFFG 314 (666) Q Consensus 235 ~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~et~~ls~~~~~~~~~~~~~~~~~~~~ 314 (666) . . ...|. + . +. T Consensus 107 --------------------------------------~-~------~~tgl--~---------------------a-l~ 117 (390) T protein:vir:79 107 --------------------------------------D-G------KYTGI--K---------------------A-LL 117 (390) T ss_pred --------------------------------------c-c------cchhh--h---------------------h-hh Confidence 0 0 00000 0 0 00 Q ss_pred ccCceEEEEeccccccccceeeeecCcccccccccccccccccccchhhhhhhhhcchhhcCccEEecccCCCchhHHHH Q lcl|Aclame:pro 315 RGSSQYIYATAQGWVDGFSGIISLAGGVSANEATTGGVGADPFIGAMMQGWGLFAERESIHVNLLIAGACAGEGDAFSTV 394 (666) Q Consensus 315 ~~~s~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ll~~p~~~~~~~~~~~v 394 (666) .... . -...++++++|++.+ ..+ T Consensus 118 ~~~~------------------------------------------------~----~~~~p~il~ap~~~~-----~~v 140 (390) T protein:vir:79 118 AAQG------------------------------------------------A----LGVKPRILAAPGLDT-----QPV 140 (390) T ss_pred hhhh------------------------------------------------h----hccccccccCCcccc-----hHH Confidence 0000 0 001356777777643 458 Q ss_pred HHHHHHHhhccccEEEEEcCCccccccccccCCHHHHHHHHhhccccchhhcccCcceEEEEcCeEEEecCcCCceeEec Q lcl|Aclame:pro 395 QKHAVSIGDERQDCLVMVSPPRSTVVNIPVTTAIDNLIAWREGSGNYNENNMNINTTYAVIDGNYKYQYDKYNDVNRWVP 474 (666) Q Consensus 395 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~p~~~~~d~~~~~~~~~p 474 (666) +.++..+|++++ +++++|.|. +.+.+++.+||+ +++|+|+++||||++++|+.++..+++| T Consensus 141 ~~~l~~~a~~~~-~~ai~D~p~--------~~t~~~a~~~~~----------~~~s~~~~~~~p~~~~~d~~~~~~~~~p 201 (390) T protein:vir:79 141 AAALAATAQSLR-AMAYVSASG--------CKTKEEAAAYRR----------QFGQREIMVIWPDWLGWDDTTNSTAVIP 201 (390) T ss_pred HHHHHHhhhhcc-eEEEEEccC--------CCCHHHHHHHhc----------CCCCceEEEEcCceeecccccCceeEee Confidence 889999999875 578887653 567889999986 3679999999999999999999999999 Q ss_pred hHHHHHHHHHhhhhcCCceecccceecceeeeeee---eeecCChhHHhhhhhccceEEEEecCCeEEEEcceecCCCcc Q lcl|Aclame:pro 475 LAADIAGLCARTDAVSQPWMSPAGYNRGQIMNVVK---LAIEPRKAHRDRLYQAAINPVIGAGGEGFILMGDKTATTVPS 551 (666) Q Consensus 475 ~s~~~ag~~a~~d~~~g~~~span~~~~~i~g~~~---~~~~~~~~~~~~Ln~~gIn~i~~~~g~G~~~wG~rT~~~~~~ 551 (666) ||+++||++||+|.++|||+||||+.+.++.+... ........|++.||++||+++++ ++||++||+||+++++ T Consensus 202 ~s~~~Ag~~a~~D~~~g~~~spsN~~i~gi~~~~~~~~~~~~~~~~~a~~Ln~~gi~t~~~--~~G~~~wG~rT~~~d~- 278 (390) T protein:vir:79 202 APAIAAGLRAKIDNDIGWHKTISNVVVNGVSGISADVSWDLQDPATDAGYLNEHEVTTLVN--RNGFRFWGERTCSDDP- 278 (390) T ss_pred hHHHHHHHHHhhhccCCcEEccCCceeeccceeeeeccccccccchhhhhhhhcCcEEEEc--CCCEEEEeccccCCCc- Confidence 99999999999999999999999998765555432 12233456788999999999864 6899999999998764 Q ss_pred ccceeehhhHHHHHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHhcCCeeeeEEEEcccCCCHHHhhCCEEEEE Q lcl|Aclame:pro 552 PFDRINVRRLFNMLKKNIGDSSKYKLFENNDNFTRASFRMEVSQYLSTIRSLGGIYDFRVQCDTTNNTPDVIDRNEFVAS 631 (666) Q Consensus 552 ~~~~i~vrR~~~~i~~~~~~~~~~~v~epn~~~~~~~i~~~i~~~l~~l~~~gal~g~~v~~d~~~n~~~~i~~G~~~~~ 631 (666) +|+||++||||+||+++|++.++|+|||||++.+|++|+++++.||++||++|+|+||+|+||+++||++||++|+|+++ T Consensus 279 ~~~~i~vrR~~~~i~~~i~~~~~~~v~e~~~~~~~~~i~~~i~~~L~~l~~~gal~g~~v~~d~~~nt~~~i~~G~~~~~ 358 (390) T protein:vir:79 279 KFAFENYTRTAQVAADSIAEAQMPVVDGPLNPSLARDIVESINGWFRQQVANGYLIGGSAWIDPEPNTADILASGKAYID 358 (390) T ss_pred ccceeeehhhHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeEEEEecCCCCHHHhhCCEEEEE Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred EEEEecCCccEEEEEEEEeecchhHHHHHHHHhc Q lcl|Aclame:pro 632 MFIKPAKSINYIMLNFTAVATGSDFDEIIGPVNQ 665 (666) Q Consensus 632 i~~~p~~p~e~i~~~~~~~~~~~~~~e~~~~~~~ 665 (666) |+++|++|+|||+|++..... .++++.+.|++ T Consensus 359 i~~~p~~p~e~i~~~~~~~~~--~~~~~~~~v~~ 390 (390) T protein:vir:79 359 YDYTPVPPLENLVLRQRITDR--FLADFPARVAG 390 (390) T ss_pred EEEEecCCcceEEEEEEEchH--HHHHHHHHhcC Confidence 999999999999999997655 58999999999 No 26 >protein:vir:98553 Length: 395 # NCBI annotation: gp21 # Family: family:all:115 # MgeID: mge:1533 # MgeName: PSP3 # Cross-refs: genbank:acc:NP_958076;genbank:gi:41057373;genbank:GeneID:2744224 Probab=100.00 E-value=1.5e-93 Score=529.50 Aligned_cols=381 Identities=15% Similarity=0.117 Sum_probs=313.2 Q ss_pred CceecCceEEEEe-cCCccccccCcCceEEEEeccCC-----CCCcCEEeCCHHHHHHHcCCcCCCchhHHHHHHHHHhC Q lcl|Aclame:pro 1 MTLLSPGFETKET-TLSTTIVQSATGRAALVGKFQWG-----PAFQIIQVTNEVELVNKFGQPDNNTADYFMSGANFLQY 74 (666) Q Consensus 1 ~~~~~PGVyvee~-~~~~~i~~v~tsv~~fvG~~~~G-----pv~~p~~i~s~~~~~~~fG~~~~~~~~~~~~~~~f~ng 74 (666) |+...|||||+|+ ++++++.+++|++.+|||+++.+ |+++|++|+|+.+|+..||. ..++..++..+|.|| T Consensus 1 m~~~~~GV~v~e~~~g~~~v~~v~tav~~~vgta~~~~~~~~p~~~pv~v~s~~~~~~~~g~---~~tl~~al~~~~~~~ 77 (395) T protein:vir:98 1 MSDFHHGTQVIEINDGTRVISTVATAVVGMVCTASDADATLFPLNEPVLITNVQSAIAKAGK---KGTLAASLQAIADQS 77 (395) T ss_pred CCCCCCCeEEEEcCCCcccccccCcceEEEEeeccCCCccccccccceEeechHHhHhhccc---ccchhhHHHHHhhcc Confidence 9999999999999 58899999999999999999875 88999999999999999994 567888999999999 Q ss_pred CCeEEEEEcccCcccccccccccccceeeecccccccccccceeeeccccccccccccccccccceeEEeeccccccccc Q lcl|Aclame:pro 75 GNDLRVVRVLNKEKAKNATALAGNIEFEITNEGSNYEVGDTIKIKHNRQDIETAGKVTKVDGDGKVKGVFIPTGKIIAHA 154 (666) Q Consensus 75 g~~~~vvRv~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~a 154 (666) |+.|+++|+..+...... .. T Consensus 78 ~~~~~vv~~~~~~~~~~~-------------------------------------------------------~~----- 97 (395) T protein:vir:98 78 KPVTVVVRVEDGTGDDEE-------------------------------------------------------AA----- 97 (395) T ss_pred CceEEEeecccccccccc-------------------------------------------------------cc----- Confidence 999999987432111000 00 Q ss_pred cccceeeecccceeEEEeecccccceeeeeeeeeccceeeeeeccchhhccccceeeeeecccceeeeeeccccccccce Q lcl|Aclame:pro 155 KAIGVYPELDGDWTAEFTSSSGNGSAALSVTKIVTDSGLLLTDLETSRANITNQTFLTKLQKYDMPAVSAIYAGEIGNSL 234 (666) Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~A~~~g~~gn~i 234 (666) ... .. ..+. |. T Consensus 98 ---------------------------~a~---------------------------~~------~~i~----g~----- 108 (395) T protein:vir:98 98 ---------------------------LAQ---------------------------TV------SNII----GG----- 108 (395) T ss_pred ---------------------------ccc---------------------------cc------cccc----cc----- Confidence 000 00 0000 00 Q ss_pred eeeeeccccccccccccccccccccccceeeeeeccCcCcccceeeecccccccceeeecccccccccccchhhhHhHhc Q lcl|Aclame:pro 235 EVEILARSAFKNTAPDLTMYPYGGERTAARNLIPYAPQNDNQYAFIVRRDGVVVESYVLSTLKGDKDVYGNSIYMDDFFG 314 (666) Q Consensus 235 ~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~et~~ls~~~~~~~~~~~~~~~~~~~~ 314 (666) . . . T Consensus 109 ---~----------------------------------~-~--------------------------------------- 111 (395) T protein:vir:98 109 ---T----------------------------------D-E--------------------------------------- 111 (395) T ss_pred ---c----------------------------------c-c--------------------------------------- Confidence 0 0 0 Q ss_pred ccCceEEEEeccccccccceeeeecCcccccccccccccccccccchhhhhhhhhcch-----hhcCccEEecccCCCch Q lcl|Aclame:pro 315 RGSSQYIYATAQGWVDGFSGIISLAGGVSANEATTGGVGADPFIGAMMQGWGLFAERE-----SIHVNLLIAGACAGEGD 389 (666) Q Consensus 315 ~~~s~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-----~~~~~ll~~p~~~~~~~ 389 (666) .+ .++|+.++.+ ...+.++++|++.. T Consensus 112 -------------------------------------------~~---~~Tgl~al~~~~~~~~~~p~il~ap~~~~--- 142 (395) T protein:vir:98 112 -------------------------------------------NG---KYTGIKALLTAQAVTGVKPRILGVPGLDT--- 142 (395) T ss_pred -------------------------------------------cc---chhHHHHHhhhhhhhccchhhcccccccc--- Confidence 00 0000000000 01357788888753 Q ss_pred hHHHHHHHHHHHhhccccEEEEEcCCccccccccccCCHHHHHHHHhhccccchhhcccCcceEEEEcCeEEEecCcCCc Q lcl|Aclame:pro 390 AFSTVQKHAVSIGDERQDCLVMVSPPRSTVVNIPVTTAIDNLIAWREGSGNYNENNMNINTTYAVIDGNYKYQYDKYNDV 469 (666) Q Consensus 390 ~~~~v~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~p~~~~~d~~~~~ 469 (666) ..++.+|..+|++++ +++++|.|. +.+++++++||+. ++|+|+++||||++++|+.++. T Consensus 143 --~~v~~al~~~~~~~~-~~~~~d~p~--------~~t~~~a~~~~~~----------~~s~~~~~~~p~~~~~d~~~~~ 201 (395) T protein:vir:98 143 --KEVAVALASAAIKLR-AFAYVSAWG--------CKTISEAMEYRKN----------FSQRELMVIWPDFLAWDTVKNT 201 (395) T ss_pred --cHHHHHHHHHhhhcC-cEEEEEcCC--------CCCHHHHHHHHhc----------cCCceEEEEecceeEecccCCc Confidence 458889999999876 577777653 5688999999974 6789999999999999999999 Q ss_pred eeEechHHHHHHHHHhhhhcCCceecccceecceeeeeee---eeecCChhHHhhhhhccceEEEEecCCeEEEEcceec Q lcl|Aclame:pro 470 NRWVPLAADIAGLCARTDAVSQPWMSPAGYNRGQIMNVVK---LAIEPRKAHRDRLYQAAINPVIGAGGEGFILMGDKTA 546 (666) Q Consensus 470 ~~~~p~s~~~ag~~a~~d~~~g~~~span~~~~~i~g~~~---~~~~~~~~~~~~Ln~~gIn~i~~~~g~G~~~wG~rT~ 546 (666) .+++|||+++||++||+|.++||||||+|+.+.++.+... .+..+++.|++.||++|||++++ ++|+++||+||+ T Consensus 202 ~~~~p~s~~~AG~~a~~d~~~g~~~spaN~~i~gi~~~~~~~~~~~~~~~~~~~~Ln~~gI~~~~~--~~G~~~wG~rT~ 279 (395) T protein:vir:98 202 TATAYATARALGLRAYIDQTVGWHKTLSNVGVQGVTGISASVFWDLQASGTDADLLNEAGVTTLVR--KDGFRFWGNRTC 279 (395) T ss_pred eeeechHHHHHHHHHHhhcccCcEeccCCceeecccccceecccccCCCcchHHhhhhcCcEEEEc--CCCEEEEccccc Confidence 9999999999999999999999999999998776666432 24456788999999999999954 689999999999 Q ss_pred CCCccccceeehhhHHHHHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHhcCCeeeeEEEEcccCCCHHHhhCC Q lcl|Aclame:pro 547 TTVPSPFDRINVRRLFNMLKKNIGDSSKYKLFENNDNFTRASFRMEVSQYLSTIRSLGGIYDFRVQCDTTNNTPDVIDRN 626 (666) Q Consensus 547 ~~~~~~~~~i~vrR~~~~i~~~~~~~~~~~v~epn~~~~~~~i~~~i~~~l~~l~~~gal~g~~v~~d~~~n~~~~i~~G 626 (666) +++ ++|+||++||||+||+++|++.++|+|||||++.+|++|+++++.||++||++|+|+||+|+||+++||+++|++| T Consensus 280 s~d-~~~~~i~~rR~~~~i~~~i~~~~~~~v~e~~~~~~~~~i~~~i~~~L~~l~~~g~l~g~~v~~d~~~nt~~~i~~G 358 (395) T protein:vir:98 280 SDD-PLFLFENYTRTAQVLADTMAEAHMWAVDKPITATLIRDIVDGINAKFRELKSNGYIVEGKCWFDEESNDKETLKAG 358 (395) T ss_pred CCC-cccceeehhhHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCceeceEEEEecCCCCHHHhhCC Confidence 876 5899999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred EEEEEEEEEecCCccEEEEEEEEeecchhHHHHHHHHhc Q lcl|Aclame:pro 627 EFVASMFIKPAKSINYIMLNFTAVATGSDFDEIIGPVNQ 665 (666) Q Consensus 627 ~~~~~i~~~p~~p~e~i~~~~~~~~~~~~~~e~~~~~~~ 665 (666) +|+++|+++|++|+|||+|+++.... .++++++.|+. T Consensus 359 ~~~~~i~~~p~~p~e~I~~~~~~~~~--~~~~~~~~~~~ 395 (395) T protein:vir:98 359 KLYIDYDYTPVPPLESLTLRQRITDK--YLVNLAESVNS 395 (395) T ss_pred eEEEEEEEEecCCcceEEEEEEEchH--HHHHHHHHhcC Confidence 99999999999999999999998776 57888888888 No 27 >protein:vir:2035 Length: 396 # NCBI annotation: gpFI # Family: family:all:115 # MgeID: mge:315 # MgeName: P2 # Cross-refs: genbank:acc:NP_046778;genbank:gi:9630349;genbank:GeneID:1261516 Probab=100.00 E-value=1.7e-93 Score=529.19 Aligned_cols=387 Identities=13% Similarity=0.106 Sum_probs=312.2 Q ss_pred CceecCceEEEEec-CCccccccCcCceEEEEeccCC-----CCCcCEEeCCHHHHHHHcCCcCCCchhHHHHHHHHHhC Q lcl|Aclame:pro 1 MTLLSPGFETKETT-LSTTIVQSATGRAALVGKFQWG-----PAFQIIQVTNEVELVNKFGQPDNNTADYFMSGANFLQY 74 (666) Q Consensus 1 ~~~~~PGVyvee~~-~~~~i~~v~tsv~~fvG~~~~G-----pv~~p~~i~s~~~~~~~fG~~~~~~~~~~~~~~~f~ng 74 (666) |+.-.|||||+|++ +++++.++.|++++|||.++++ |+++|++|+|+.+|...||+ ...++.++.+||.|| T Consensus 1 m~~~~~GV~v~e~~~g~~~i~~v~tav~~~vg~a~~a~~~~~~l~~pvlvts~~~~~~~~g~---~~tL~~al~~~~~ng 77 (396) T protein:vir:20 1 MSDYHHGVQVLEINEGTRVISTVSTAIVGMVCTASDADAETFPLNKPVLITNVQSAISKAGK---KGTLAASLQAIADQS 77 (396) T ss_pred CCCCCCCeEEEEcCCCcceeeecCCceeEEEeeeccCCCccccCccCEEeechHHHHhhccc---ccchhhhhhhhhccC Confidence 99999999999995 8899999999999999999765 78999999999999999994 567788999999999 Q ss_pred CCeEEEEEcccCcccccccccccccceeeecccccccccccceeeeccccccccccccccccccceeEEeeccccccccc Q lcl|Aclame:pro 75 GNDLRVVRVLNKEKAKNATALAGNIEFEITNEGSNYEVGDTIKIKHNRQDIETAGKVTKVDGDGKVKGVFIPTGKIIAHA 154 (666) Q Consensus 75 g~~~~vvRv~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~a 154 (666) |..||++|+......... . T Consensus 78 g~~~~v~~~~~~~~~~~~----------------------------------------------------~--------- 96 (396) T protein:vir:20 78 KPVTVVMRVEDGTGDDEE----------------------------------------------------T--------- 96 (396) T ss_pred ceeEEEEecccccccccc----------------------------------------------------c--------- Confidence 999999997432110000 0 Q ss_pred cccceeeecccceeEEEeecccccceeeeeeeeeccceeeeeeccchhhccccceeeeeecccceeeeeeccccccccce Q lcl|Aclame:pro 155 KAIGVYPELDGDWTAEFTSSSGNGSAALSVTKIVTDSGLLLTDLETSRANITNQTFLTKLQKYDMPAVSAIYAGEIGNSL 234 (666) Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~A~~~g~~gn~i 234 (666) .. .. .. ..+ T Consensus 97 ----------------------~~--a~------------------------------------------t~-----~~~ 105 (396) T protein:vir:20 97 ----------------------KL--AQ------------------------------------------TV-----SNI 105 (396) T ss_pred ----------------------cc--cc------------------------------------------cc-----ccc Confidence 00 00 00 000 Q ss_pred eeeeeccccccccccccccccccccccceeeeeeccCcCcccceeeecccccccceeeecccccccccccchhhhHhHhc Q lcl|Aclame:pro 235 EVEILARSAFKNTAPDLTMYPYGGERTAARNLIPYAPQNDNQYAFIVRRDGVVVESYVLSTLKGDKDVYGNSIYMDDFFG 314 (666) Q Consensus 235 ~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~et~~ls~~~~~~~~~~~~~~~~~~~~ 314 (666) ...... ... ..+. .. +. T Consensus 106 ~~~~~~--------------------------------~~~-------~tg~-----------------------~a-l~ 122 (396) T protein:vir:20 106 IGTTDE--------------------------------NGQ-------YTGL-----------------------KA-ML 122 (396) T ss_pred cccccc--------------------------------ccc-------cchh-----------------------hh-hh Confidence 000000 000 0000 00 00 Q ss_pred ccCceEEEEeccccccccceeeeecCcccccccccccccccccccchhhhhhhhhcchhhcCccEEecccCCCchhHHHH Q lcl|Aclame:pro 315 RGSSQYIYATAQGWVDGFSGIISLAGGVSANEATTGGVGADPFIGAMMQGWGLFAERESIHVNLLIAGACAGEGDAFSTV 394 (666) Q Consensus 315 ~~~s~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ll~~p~~~~~~~~~~~v 394 (666) ... .+ -...+.++++|++. ...+ T Consensus 123 ~~~------------------------------------------------~~----~~~~p~i~~ap~~~-----~~~v 145 (396) T protein:vir:20 123 AAE------------------------------------------------SV----TGVKPRILGVPGLD-----TKEV 145 (396) T ss_pred hhc------------------------------------------------cc----cccchhhhhhhhhc-----cHHH Confidence 000 00 00124566777764 3568 Q ss_pred HHHHHHHhhccccEEEEEcCCccccccccccCCHHHHHHHHhhccccchhhcccCcceEEEEcCeEEEecCcCCceeEec Q lcl|Aclame:pro 395 QKHAVSIGDERQDCLVMVSPPRSTVVNIPVTTAIDNLIAWREGSGNYNENNMNINTTYAVIDGNYKYQYDKYNDVNRWVP 474 (666) Q Consensus 395 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~p~~~~~d~~~~~~~~~p 474 (666) +.+|+++|++++. ++++|+|. ..+++++++||+. ++|+|+++||||++++|+.++..+++| T Consensus 146 ~~al~~~~~~~~~-~~~iD~p~--------~~~~~~a~~~r~~----------~~s~~~~~~~P~~~~~d~~~~~~~~~p 206 (396) T protein:vir:20 146 AVALASVCQKLRA-FGYISAWG--------CKTISEVKAYRQN----------FSQRELMVIWPDFLAWDTVTSTTATAY 206 (396) T ss_pred HHHHHHHHhcCCc-EEEEecCC--------CCCHHHHHHHhhC----------CCCceEEEEcCccccccCcCCcceeec Confidence 9999999998875 56676654 4678999999973 678999999999999999999999999 Q ss_pred hHHHHHHHHHhhhhcCCceecccceecceeeeeee---eeecCChhHHhhhhhccceEEEEecCCeEEEEcceecCCCcc Q lcl|Aclame:pro 475 LAADIAGLCARTDAVSQPWMSPAGYNRGQIMNVVK---LAIEPRKAHRDRLYQAAINPVIGAGGEGFILMGDKTATTVPS 551 (666) Q Consensus 475 ~s~~~ag~~a~~d~~~g~~~span~~~~~i~g~~~---~~~~~~~~~~~~Ln~~gIn~i~~~~g~G~~~wG~rT~~~~~~ 551 (666) ||+++||++||+|.++|+|+||||+++.+|.+... ....+++.|++.||++|||++++ ++||++||+||++++ + T Consensus 207 ~s~~~Ag~~a~~d~~~g~~~spaN~~l~gi~~~~~~~~~~~~~~~~~~~~Ln~~gi~~~~~--~~G~~~wG~rT~s~d-~ 283 (396) T protein:vir:20 207 ATARALGLRAKIDQEQGWHKTLSNVGVNGVTGISASVFWDLQESGTDADLLNESGVTTLIR--RDGFRFWGNRTCSDD-P 283 (396) T ss_pred hhHHHHHHHHHhhhhcCcEeccCCceeccceecceecccccCCCcchhhhhhhcCcEEEEc--CCCEEEEcccccCCC-c Confidence 99999999999999999999999998777666532 23446788999999999999965 689999999999875 5 Q ss_pred ccceeehhhHHHHHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHhcCCeeeeEEEEcccCCCHHHhhCCEEEEE Q lcl|Aclame:pro 552 PFDRINVRRLFNMLKKNIGDSSKYKLFENNDNFTRASFRMEVSQYLSTIRSLGGIYDFRVQCDTTNNTPDVIDRNEFVAS 631 (666) Q Consensus 552 ~~~~i~vrR~~~~i~~~~~~~~~~~v~epn~~~~~~~i~~~i~~~l~~l~~~gal~g~~v~~d~~~n~~~~i~~G~~~~~ 631 (666) +|+||++|||++||+++|++.++|+|||||++.+|++|+++++.||++||++|+|+||+|+||+++||+++|++|+|+++ T Consensus 284 ~~~~i~~rR~~~~i~~~~~~~~~~~v~e~~~~~~~~~i~~~i~~~L~~l~~~G~l~g~~v~~d~~~nt~~~i~~G~~~~~ 363 (396) T protein:vir:20 284 LFLFENYTRTAQVVADTMAEAHMWAVDKPITATLIRDIVDGINAKFRELKTNGYIVDATCWFSEESNDAETLKAGKLYID 363 (396) T ss_pred ccceeehhhHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCcceeceEEEEecCCCCHHHhhCCEEEEE Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred EEEEecCCccEEEEEEEEeecchhHHHHHHHHhcC Q lcl|Aclame:pro 632 MFIKPAKSINYIMLNFTAVATGSDFDEIIGPVNQA 666 (666) Q Consensus 632 i~~~p~~p~e~i~~~~~~~~~~~~~~e~~~~~~~~ 666 (666) |+++|++|+|||+|+++.... +|++++++|++= T Consensus 364 i~~~p~~p~e~i~~~~~~~~~--~~~~~~~~~~~~ 396 (396) T protein:vir:20 364 YDYTPVPPLENLTLRQRITDK--YLANLVTSVNSN 396 (396) T ss_pred EEEEecCCcceEEEEEEEchH--HHHHHHHHhhcC Confidence 999999999999999997766 699999999888 No 28 >protein:vir:1172 Length: 391 # NCBI annotation: hypothetical protein # Family: family:all:115 # MgeID: mge:24 # MgeName: phi CTX # Cross-refs: genbank:acc:NP_490621;genbank:gi:17313241;genbank:GeneID:927300 Probab=100.00 E-value=1.1e-93 Score=530.22 Aligned_cols=380 Identities=16% Similarity=0.126 Sum_probs=311.4 Q ss_pred CceecCceEEEEe-cCCccccccCcCceEEEEeccC-----CCCCcCEEeCCHHHHHHHcCCcCCCchhHHHHHHHHHhC Q lcl|Aclame:pro 1 MTLLSPGFETKET-TLSTTIVQSATGRAALVGKFQW-----GPAFQIIQVTNEVELVNKFGQPDNNTADYFMSGANFLQY 74 (666) Q Consensus 1 ~~~~~PGVyvee~-~~~~~i~~v~tsv~~fvG~~~~-----Gpv~~p~~i~s~~~~~~~fG~~~~~~~~~~~~~~~f~ng 74 (666) |++.+|||||+|+ +++++|..+.|++.+|+|.++. +|+++|++|+|+.+|...|| ...++.+++..+|.|+ T Consensus 3 ~~~~~~GV~v~e~~~~~~~i~~v~tavig~vg~a~~a~~~~~~~~~p~~v~s~~~~~~~~g---~~~tl~~al~~~~~~~ 79 (391) T protein:vir:11 3 ADQYHHGVRVQEINDGTRPIRTIATAIIGLVATAEDADATAFPLDTPVLITNVQAAIGKAG---TSGTLPASLQAIADQA 79 (391) T ss_pred CCcCCCcEEEEECCCCcceecccCCceeEEEEecCCCCCccccccccEEEecchhhheecC---CCccchhhhhhhhccc Confidence 7889999999999 5889999999999999999994 69999999999999999998 4567888999999999 Q ss_pred CCeEEEEEcccCcccccccccccccceeeecccccccccccceeeeccccccccccccccccccceeEEeeccccccccc Q lcl|Aclame:pro 75 GNDLRVVRVLNKEKAKNATALAGNIEFEITNEGSNYEVGDTIKIKHNRQDIETAGKVTKVDGDGKVKGVFIPTGKIIAHA 154 (666) Q Consensus 75 g~~~~vvRv~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~a 154 (666) |+.||+||+..+...+.. . .+ T Consensus 80 g~~~~vv~~~~~~~~~~t----------------------------------------------------~--~d----- 100 (391) T protein:vir:11 80 NAATVVVRVKPGEDEAAT----------------------------------------------------N--SA----- 100 (391) T ss_pred cceeEEeeeccccccccc----------------------------------------------------c--hh----- Confidence 999999997432110000 0 00 Q ss_pred cccceeeecccceeEEEeecccccceeeeeeeeeccceeeeeeccchhhccccceeeeeecccceeeeeeccccccccce Q lcl|Aclame:pro 155 KAIGVYPELDGDWTAEFTSSSGNGSAALSVTKIVTDSGLLLTDLETSRANITNQTFLTKLQKYDMPAVSAIYAGEIGNSL 234 (666) Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~A~~~g~~gn~i 234 (666) . .+. ..+.. T Consensus 101 --------------------------------~------------------~g~-------------~~a~~-------- 109 (391) T protein:vir:11 101 --------------------------------V------------------IGG-------------VSADG-------- 109 (391) T ss_pred --------------------------------h------------------hcc-------------ccccc-------- Confidence 0 000 00000 Q ss_pred eeeeeccccccccccccccccccccccceeeeeeccCcCcccceeeecccccccceeeecccccccccccchhhhHhHhc Q lcl|Aclame:pro 235 EVEILARSAFKNTAPDLTMYPYGGERTAARNLIPYAPQNDNQYAFIVRRDGVVVESYVLSTLKGDKDVYGNSIYMDDFFG 314 (666) Q Consensus 235 ~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~et~~ls~~~~~~~~~~~~~~~~~~~~ 314 (666) ...+. +. .... T Consensus 110 -----------------------------------------------~~~g~--~a------------------~~~~-- 120 (391) T protein:vir:11 110 -----------------------------------------------KYTGM--KA------------------LLAA-- 120 (391) T ss_pred -----------------------------------------------chhhh--hh------------------hhhh-- Confidence 00000 00 0000 Q ss_pred ccCceEEEEeccccccccceeeeecCcccccccccccccccccccchhhhhhhhhcchhhcCccEEecccCCCchhHHHH Q lcl|Aclame:pro 315 RGSSQYIYATAQGWVDGFSGIISLAGGVSANEATTGGVGADPFIGAMMQGWGLFAERESIHVNLLIAGACAGEGDAFSTV 394 (666) Q Consensus 315 ~~~s~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ll~~p~~~~~~~~~~~v 394 (666) .. .+ ...+.++++|++. ..++ T Consensus 121 --~~------------------------------------------------~~----~~~p~~~~ap~~~-----~~~v 141 (391) T protein:vir:11 121 --KA------------------------------------------------RL----GVVPRILGVPGLD-----TQPV 141 (391) T ss_pred --hh------------------------------------------------hh----eeccccccccccc-----cHHH Confidence 00 00 0124566777764 3468 Q ss_pred HHHHHHHhhccccEEEEEcCCccccccccccCCHHHHHHHHhhccccchhhcccCcceEEEEcCeEEEecCcCCceeEec Q lcl|Aclame:pro 395 QKHAVSIGDERQDCLVMVSPPRSTVVNIPVTTAIDNLIAWREGSGNYNENNMNINTTYAVIDGNYKYQYDKYNDVNRWVP 474 (666) Q Consensus 395 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~p~~~~~d~~~~~~~~~p 474 (666) +.+|+++|+++ ++++++|+|. ..+++++.+||+. ++|+|+++||||++++|+.++..+++| T Consensus 142 ~~al~~~~~~~-~~~~i~D~p~--------~~t~~~a~~~r~~----------~~s~~~~~~~p~~~~~~~~~~~~~~~p 202 (391) T protein:vir:11 142 ATALIAIAQQL-RAFAYVSASG--------CKTKEEATAYREN----------FAAREAMVIWPDFLTWSTVVNQTVPAP 202 (391) T ss_pred HHHHHHhhccc-ceEEEEEcCC--------CCCHHHHHHHhhh----------cCCceEEEEcCcceecccccCceEEec Confidence 99999999887 5688887663 4678899999973 679999999999999999999999999 Q ss_pred hHHHHHHHHHhhhhcCCceecccceecceeeeeee---eeecCChhHHhhhhhccceEEEEecCCeEEEEcceecCCCcc Q lcl|Aclame:pro 475 LAADIAGLCARTDAVSQPWMSPAGYNRGQIMNVVK---LAIEPRKAHRDRLYQAAINPVIGAGGEGFILMGDKTATTVPS 551 (666) Q Consensus 475 ~s~~~ag~~a~~d~~~g~~~span~~~~~i~g~~~---~~~~~~~~~~~~Ln~~gIn~i~~~~g~G~~~wG~rT~~~~~~ 551 (666) ||+++||++||+|.++|||+||||+++.++.+... .+..+++.|++.||++||++++ +++||++||+||++.+ + T Consensus 203 ~s~~~ag~~a~~d~~~g~~~span~~l~gi~~~~~~~~~~~~~~~~~~~~Ln~~gi~~~~--~~~G~~~wG~rT~~~d-~ 279 (391) T protein:vir:11 203 AVAQALGLRARIDQEVGWHKTLSNVAVNGVTGISADVFWDLQSPSTDANYLNENEVTTLV--QEGGFRFWGSRTCSDD-P 279 (391) T ss_pred hHHHHHHHHHHhhccCCcEEccCCceeeceeecccccccccCCCcchhhhhhhcCcEEEE--cCCCEEEEcccccCCC-c Confidence 99999999999999999999999999876666532 3344568899999999999985 4789999999999876 5 Q ss_pred ccceeehhhHHHHHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHhcCCeeeeEEEEcccCCCHHHhhCCEEEEE Q lcl|Aclame:pro 552 PFDRINVRRLFNMLKKNIGDSSKYKLFENNDNFTRASFRMEVSQYLSTIRSLGGIYDFRVQCDTTNNTPDVIDRNEFVAS 631 (666) Q Consensus 552 ~~~~i~vrR~~~~i~~~~~~~~~~~v~epn~~~~~~~i~~~i~~~l~~l~~~gal~g~~v~~d~~~n~~~~i~~G~~~~~ 631 (666) +|+||++||||+||+++|++.++|+|||||++.+|++|+++|+.||++||++|+|+||+|+||+++||+++|++|+|+++ T Consensus 280 ~~~~i~vrR~~~~i~~~~~~~~~~~v~e~n~~~~~~~i~~~i~~~l~~l~~~g~l~g~~~~~~~~~n~~~~i~~G~~~~~ 359 (391) T protein:vir:11 280 LFAFENYTRTAQVLADTIAEAHMWAVDKPMHPSLVRDILEGVNAKFRELKGLGLIIDAQAWYDPNVNDKDTLKAGKLRIT 359 (391) T ss_pred ccceeehhhHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhccceeceEEEEecCCCCHHHhhCCeEEEE Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred EEEEecCCccEEEEEEEEeecchhHHHHHHHHhc Q lcl|Aclame:pro 632 MFIKPAKSINYIMLNFTAVATGSDFDEIIGPVNQ 665 (666) Q Consensus 632 i~~~p~~p~e~i~~~~~~~~~~~~~~e~~~~~~~ 665 (666) |+++|++|+|||++++++... .|+|+++.|++ T Consensus 360 i~~~p~~p~e~i~~~~~~~~~--~~~~~~~~~~a 391 (391) T protein:vir:11 360 YDYTPVPPLEDLTFFQKITDS--YLVDFASRVNA 391 (391) T ss_pred EEEEecCCcceEEEEEEEchH--HHHHHHHHhcC Confidence 999999999999999997766 59999999999 No 29 >protein:vir:1845 Length: 392 # NCBI annotation: tail sheath protein FI # Family: family:all:115 # MgeID: mge:324 # MgeName: 186 # Cross-refs: genbank:acc:NP_052269;genbank:gi:9634076;genbank:GeneID:1262448 Probab=100.00 E-value=7.9e-93 Score=525.54 Aligned_cols=381 Identities=15% Similarity=0.119 Sum_probs=312.8 Q ss_pred CceecCceEEEEe-cCCccccccCcCceEEEEeccCC-----CCCcCEEeCCHHHHHHHcCCcCCCchhHHHHHHHHHhC Q lcl|Aclame:pro 1 MTLLSPGFETKET-TLSTTIVQSATGRAALVGKFQWG-----PAFQIIQVTNEVELVNKFGQPDNNTADYFMSGANFLQY 74 (666) Q Consensus 1 ~~~~~PGVyvee~-~~~~~i~~v~tsv~~fvG~~~~G-----pv~~p~~i~s~~~~~~~fG~~~~~~~~~~~~~~~f~ng 74 (666) |+.-.|||||+|+ +++++|.+++|++.+|||.++++ |+++|++|+|+.+|...||. ...+.+++..+|.|| T Consensus 1 m~~~~~Gv~v~e~~~g~~~i~~~~tav~g~vgta~~~~~~~~~~~~p~~its~~~~~~~~g~---~gtl~~al~~~~~ng 77 (392) T protein:vir:18 1 MSDFHHGTKVIEINDGTRVISTVATAIVGMVWTASDADAETFPLNEPVLITNVQSAIAKAGK---KGTLSASLQAIADQS 77 (392) T ss_pred CCCCCCCeEEEEcCCCceeeeccCcceeEEEEeccCCCCcccccccceEeechHHHHhhcCC---CcchHHHHHHhhccc Confidence 9998899999999 58899999999999999999876 89999999999999999995 567888999999999 Q ss_pred CCeEEEEEcccCcccccccccccccceeeecccccccccccceeeeccccccccccccccccccceeEEeeccccccccc Q lcl|Aclame:pro 75 GNDLRVVRVLNKEKAKNATALAGNIEFEITNEGSNYEVGDTIKIKHNRQDIETAGKVTKVDGDGKVKGVFIPTGKIIAHA 154 (666) Q Consensus 75 g~~~~vvRv~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~a 154 (666) |..|+++|+..+........ +.. T Consensus 78 g~~~~vv~v~~~~~~~~~~~----------------------------------------------------t~~----- 100 (392) T protein:vir:18 78 KPVTVVVRVAEGTGDDAEAQ----------------------------------------------------TTS----- 100 (392) T ss_pred CceEEEeccccccccccccc----------------------------------------------------chh----- Confidence 99999998743110000000 000 Q ss_pred cccceeeecccceeEEEeecccccceeeeeeeeeccceeeeeeccchhhccccceeeeeecccceeeeeeccccccccce Q lcl|Aclame:pro 155 KAIGVYPELDGDWTAEFTSSSGNGSAALSVTKIVTDSGLLLTDLETSRANITNQTFLTKLQKYDMPAVSAIYAGEIGNSL 234 (666) Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~A~~~g~~gn~i 234 (666) + +. |.. T Consensus 101 -----------d-------------------------------------------------------li----G~~---- 106 (392) T protein:vir:18 101 -----------N-------------------------------------------------------II----GGT---- 106 (392) T ss_pred -----------h-------------------------------------------------------he----ecc---- Confidence 0 00 000 Q ss_pred eeeeeccccccccccccccccccccccceeeeeeccCcCcccceeeecccccccceeeecccccccccccchhhhHhHhc Q lcl|Aclame:pro 235 EVEILARSAFKNTAPDLTMYPYGGERTAARNLIPYAPQNDNQYAFIVRRDGVVVESYVLSTLKGDKDVYGNSIYMDDFFG 314 (666) Q Consensus 235 ~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~et~~ls~~~~~~~~~~~~~~~~~~~~ 314 (666) . . .....+ ... T Consensus 107 --------------------------------------~-~----~~~~tg-----------------------~~a--- 117 (392) T protein:vir:18 107 --------------------------------------D-E----NGKYTG-----------------------IKA--- 117 (392) T ss_pred --------------------------------------c-c----cchhhh-----------------------HHH--- Confidence 0 0 000000 000 Q ss_pred ccCceEEEEeccccccccceeeeecCcccccccccccccccccccchhhhhhhhhcc--hhhcCccEEecccCCCchhHH Q lcl|Aclame:pro 315 RGSSQYIYATAQGWVDGFSGIISLAGGVSANEATTGGVGADPFIGAMMQGWGLFAER--ESIHVNLLIAGACAGEGDAFS 392 (666) Q Consensus 315 ~~~s~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~ll~~p~~~~~~~~~~ 392 (666) +.... ....++++++|++. +. T Consensus 118 ----------------------------------------------------l~~~~~~~~~~p~il~ap~~~-----~~ 140 (392) T protein:vir:18 118 ----------------------------------------------------LLTAEAVTGVKPRILGVPGLD-----TQ 140 (392) T ss_pred ----------------------------------------------------HHhhhhhhceeehhcccCccc-----hH Confidence 00000 00125788899875 35 Q ss_pred HHHHHHHHHhhccccEEEEEcCCccccccccccCCHHHHHHHHhhccccchhhcccCcceEEEEcCeEEEecCcCCceeE Q lcl|Aclame:pro 393 TVQKHAVSIGDERQDCLVMVSPPRSTVVNIPVTTAIDNLIAWREGSGNYNENNMNINTTYAVIDGNYKYQYDKYNDVNRW 472 (666) Q Consensus 393 ~v~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~p~~~~~d~~~~~~~~ 472 (666) .++.+|.++|++++. ++++|+| ++++++++.+||+. ++|+|+++||||++++|+.++..++ T Consensus 141 ~v~~~l~~~~~~~~~-~~~~d~~--------~~~~~~~a~~~~~~----------~~s~~~~~~~p~~~~~d~~~~~~~~ 201 (392) T protein:vir:18 141 EVATALASVCISLRA-FGYVSAW--------GCKTISEAMAYREN----------FSQRELMVIWPDFLAWDTTANATAT 201 (392) T ss_pred HHHHHHHHHHhhcCc-EEEEecC--------CCCCHHHHHHHHhh----------ccCceEEEEeCceeeecccCCceEE Confidence 689999999998865 6666654 45788999999973 6789999999999999999999999 Q ss_pred echHHHHHHHHHhhhhcCCceecccceecceeeeeee---eeecCChhHHhhhhhccceEEEEecCCeEEEEcceecCCC Q lcl|Aclame:pro 473 VPLAADIAGLCARTDAVSQPWMSPAGYNRGQIMNVVK---LAIEPRKAHRDRLYQAAINPVIGAGGEGFILMGDKTATTV 549 (666) Q Consensus 473 ~p~s~~~ag~~a~~d~~~g~~~span~~~~~i~g~~~---~~~~~~~~~~~~Ln~~gIn~i~~~~g~G~~~wG~rT~~~~ 549 (666) +|||+++||+++|+|.++|||+||+|+++.++.++.. .+..+++.|++.||++|||+++ +++|+++||+||++++ T Consensus 202 ~p~s~~~AG~~a~~d~~~g~~~spaN~~l~gi~~~~~~~~~~~~~~~~~~~~Ln~~gI~t~~--~~~G~~~wG~rT~~~d 279 (392) T protein:vir:18 202 AYATARALGLRAYIDQTIGWHKTLSNVGVQGVTGISASVFWDLQASGTDADLLNEAGVTTLV--RKDGFRFWGNRTCSDD 279 (392) T ss_pred echHHHHHHHHHhhhccCCceEccCCceeeceeecceecccccCCCcchhhhhhhcCceEEE--cCCCEEEEcccccCCC Confidence 9999999999999999999999999998876666432 2445678899999999999995 4689999999999876 Q ss_pred ccccceeehhhHHHHHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHhcCCeeeeEEEEcccCCCHHHhhCCEEE Q lcl|Aclame:pro 550 PSPFDRINVRRLFNMLKKNIGDSSKYKLFENNDNFTRASFRMEVSQYLSTIRSLGGIYDFRVQCDTTNNTPDVIDRNEFV 629 (666) Q Consensus 550 ~~~~~~i~vrR~~~~i~~~~~~~~~~~v~epn~~~~~~~i~~~i~~~l~~l~~~gal~g~~v~~d~~~n~~~~i~~G~~~ 629 (666) ++|+||++||||+||+++|++.++|+|||||++.+|++|+++|+.||++||++|+|+||+|+||+++||+++|++|+|+ T Consensus 280 -~~~~~i~~rR~~~~i~~~i~~~~~~~v~e~n~~~~~~~i~~~i~~~L~~l~~~gal~g~~v~~d~~~nt~~~i~~G~~~ 358 (392) T protein:vir:18 280 -PLFLFENYTRTAQVLADTMAEAHMWAVDKPITASLIRDIVDGINAKFRELKSNGYIVDGECWFDEESNDKETLKAGKLY 358 (392) T ss_pred -cccceeehhhHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhcCcccceEEEEecCCCCHHHhhCCeEE Confidence 5999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred EEEEEEecCCccEEEEEEEEeecchhHHHHHHHHhc Q lcl|Aclame:pro 630 ASMFIKPAKSINYIMLNFTAVATGSDFDEIIGPVNQ 665 (666) Q Consensus 630 ~~i~~~p~~p~e~i~~~~~~~~~~~~~~e~~~~~~~ 665 (666) ++|+++|++|+|||+|+++.... .++++.+.|++ T Consensus 359 ~~v~~~p~~p~e~I~~~~~~~~~--~~~~~~~~~~~ 392 (392) T protein:vir:18 359 IDYDYTPVPPLESLTLRQRITDK--YLVNLAESVNS 392 (392) T ss_pred EEEEEEecCCcceEEEEEEEchH--HHHHHHHHhcC Confidence 99999999999999999997766 68889999888 No 30 >protein:vir:100323 Length: 393 # NCBI annotation: tail sheath protein FI # Family: family:all:115 # MgeID: mge:1484 # MgeName: phi-MhaA1-PHL101 # Cross-refs: genbank:acc:YP_655492;genbank:gi:109289960;genbank:GeneID:4157366 Probab=100.00 E-value=7.6e-93 Score=525.61 Aligned_cols=379 Identities=14% Similarity=0.107 Sum_probs=311.9 Q ss_pred CceecCceEEEEe-cCCccccccCcCceEEEEeccCC-----CCCcCEEeCCHHHHHHHcCCcCCCchhHHHHHHHHHhC Q lcl|Aclame:pro 1 MTLLSPGFETKET-TLSTTIVQSATGRAALVGKFQWG-----PAFQIIQVTNEVELVNKFGQPDNNTADYFMSGANFLQY 74 (666) Q Consensus 1 ~~~~~PGVyvee~-~~~~~i~~v~tsv~~fvG~~~~G-----pv~~p~~i~s~~~~~~~fG~~~~~~~~~~~~~~~f~ng 74 (666) |++..|||||+|+ +++++|.+++|++.+|||+++++ |+|+|++|+|+.||.+.||+ ..++.+++..+|.|+ T Consensus 4 ~~~~~~GV~v~e~~~g~~~i~~~~tav~~~vgta~~~~~~~~pln~pv~i~s~~~~~~~~g~---~g~L~~al~~~~~~~ 80 (393) T protein:vir:10 4 LDTYLHGVEVVEVNAGGVTISTAATSVIGVVCTGDQADAETFPLNTPVLITNPLNYLEKAGS---TGTLRRTLNSIGSIV 80 (393) T ss_pred CCccCCCeEEEEcCCCcceecccCcceeEEEeeccCcCcccccCccceEecchHHHHHhhCC---ccchhhhhhhhhccc Confidence 5555799999999 58899999999999999999987 99999999999999999994 578889999999999 Q ss_pred CCeEEEEEcccCcccccccccccccceeeecccccccccccceeeeccccccccccccccccccceeEEeeccccccccc Q lcl|Aclame:pro 75 GNDLRVVRVLNKEKAKNATALAGNIEFEITNEGSNYEVGDTIKIKHNRQDIETAGKVTKVDGDGKVKGVFIPTGKIIAHA 154 (666) Q Consensus 75 g~~~~vvRv~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~a 154 (666) |+.||+||+......+.. .. T Consensus 81 ~~~~~vv~v~~~~~~~~t-------------------------------------------------------~~----- 100 (393) T protein:vir:10 81 KTPTVIVRVAESDDSDTL-------------------------------------------------------TA----- 100 (393) T ss_pred CceEEEeecccCcccccc-------------------------------------------------------cc----- Confidence 999999998432111000 00 Q ss_pred cccceeeecccceeEEEeecccccceeeeeeeeeccceeeeeeccchhhccccceeeeeecccceeeeeeccccccccce Q lcl|Aclame:pro 155 KAIGVYPELDGDWTAEFTSSSGNGSAALSVTKIVTDSGLLLTDLETSRANITNQTFLTKLQKYDMPAVSAIYAGEIGNSL 234 (666) Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~A~~~g~~gn~i 234 (666) . +..... T Consensus 101 --------------------------------~----------------------------------iig~~~------- 107 (393) T protein:vir:10 101 --------------------------------N----------------------------------IVGTQE------- 107 (393) T ss_pred --------------------------------c----------------------------------cccccc------- Confidence 0 000000 Q ss_pred eeeeeccccccccccccccccccccccceeeeeeccCcCcccceeeecccccccceeeecccccccccccchhhhHhHhc Q lcl|Aclame:pro 235 EVEILARSAFKNTAPDLTMYPYGGERTAARNLIPYAPQNDNQYAFIVRRDGVVVESYVLSTLKGDKDVYGNSIYMDDFFG 314 (666) Q Consensus 235 ~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~et~~ls~~~~~~~~~~~~~~~~~~~~ 314 (666) . .. ..| +. .+. T Consensus 108 --------------------------------------~-~~------~tg-----------------------l~-al~ 118 (393) T protein:vir:10 108 --------------------------------------N-GK------FTG-----------------------IK-ALL 118 (393) T ss_pred --------------------------------------c-ch------hhH-----------------------HH-HHH Confidence 0 00 000 00 000 Q ss_pred ccCceEEEEeccccccccceeeeecCcccccccccccccccccccchhhhhhhhhcchhhcCccEEecccCCCchhHHHH Q lcl|Aclame:pro 315 RGSSQYIYATAQGWVDGFSGIISLAGGVSANEATTGGVGADPFIGAMMQGWGLFAERESIHVNLLIAGACAGEGDAFSTV 394 (666) Q Consensus 315 ~~~s~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ll~~p~~~~~~~~~~~v 394 (666) .... . ....++||++||+.+ .++ T Consensus 119 ~~~~------------------------------------------------~----~~~~p~li~apg~~~-----~~~ 141 (393) T protein:vir:10 119 TAQS------------------------------------------------T----VFVKPKLLCVPQHDN-----QAV 141 (393) T ss_pred hhhh------------------------------------------------h----cceeeeeeeeccccc-----hHH Confidence 0000 0 001256788888753 457 Q ss_pred HHHHHHHhhccccEEEEEcCCccccccccccCCHHHHHHHHhhccccchhhcccCcceEEEEcCeEEEecCcCCceeEec Q lcl|Aclame:pro 395 QKHAVSIGDERQDCLVMVSPPRSTVVNIPVTTAIDNLIAWREGSGNYNENNMNINTTYAVIDGNYKYQYDKYNDVNRWVP 474 (666) Q Consensus 395 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~p~~~~~d~~~~~~~~~p 474 (666) +.+++++|++++++++++|+| .++.++++.|++. ++|.|+++||||++++|+.++..+++| T Consensus 142 ~~al~~~~~~~~~~~~v~d~~---------~~t~~~ai~~~~~----------~~s~~~~~~~P~~~~~d~~~~~~~~~p 202 (393) T protein:vir:10 142 ATELLSVAKKLNAFAFISDNG---------ATTKEQAYTYRQN----------FSQREGMMIFGDWKSYNTDKKAYDTDY 202 (393) T ss_pred HHHHHHHhhccCcEEEEEcCC---------CCCHHHHHHHhhh----------cCCceEEEEecccccccccCCceeEee Confidence 899999999999999888765 4578899999974 578899999999999999999999999 Q ss_pred hHHHHHHHHHhhhhcCCceecccceecceeeeee---eeeecCChhHHhhhhhccceEEEEecCCeEEEEcceecCCCcc Q lcl|Aclame:pro 475 LAADIAGLCARTDAVSQPWMSPAGYNRGQIMNVV---KLAIEPRKAHRDRLYQAAINPVIGAGGEGFILMGDKTATTVPS 551 (666) Q Consensus 475 ~s~~~ag~~a~~d~~~g~~~span~~~~~i~g~~---~~~~~~~~~~~~~Ln~~gIn~i~~~~g~G~~~wG~rT~~~~~~ 551 (666) ||+++||++||+|.++|||+||||+.+.++.+.. .....+++.|++.||++|||||+ +++|+++||+||++++ + T Consensus 203 ~s~~~Ag~~a~~d~~~G~~~spaN~~l~gi~~~~~~~~~~~~~~~~~~~~Ln~~gI~t~~--~~~G~~~wG~rT~s~d-~ 279 (393) T protein:vir:10 203 AVARACALQAYIDKTVGWHKNISNVELDGVTGITKAVEFDINESSTEANYLNEKGITICL--NHNGFRYWGSRTLATD-T 279 (393) T ss_pred hhHHHHHHHHHhhcCCCcEEccCCceeeceeecceecccccCCCcchhHhHhhcCceEEE--cCCCEEEEcccccCCC-c Confidence 9999999999999999999999999877666643 23445678899999999999995 4689999999999876 5 Q ss_pred ccceeehhhHHHHHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHhcC--CeeeeEEEEcccCCCHHHhhCCEEE Q lcl|Aclame:pro 552 PFDRINVRRLFNMLKKNIGDSSKYKLFENNDNFTRASFRMEVSQYLSTIRSLG--GIYDFRVQCDTTNNTPDVIDRNEFV 629 (666) Q Consensus 552 ~~~~i~vrR~~~~i~~~~~~~~~~~v~epn~~~~~~~i~~~i~~~l~~l~~~g--al~g~~v~~d~~~n~~~~i~~G~~~ 629 (666) +|+||++|||++||+++|++.++|+|||||++.+|++|+++++.||++||+.| +|+||+|.||++ ||++||++|+|+ T Consensus 280 ~~~~i~vrR~~~~i~~~i~~~~~~~v~e~~~~~~~~~i~~~i~~~L~~l~~~g~~al~g~~v~~~~~-nt~~~i~~G~~~ 358 (393) T protein:vir:10 280 RWAFQQSVRTAQIIKETIGAGLAWAVDMPLTPLRVKTMLEAINNKLRSWASGDDPRILGARVWVAEE-ITADIIKSGKFV 358 (393) T ss_pred ccceeehhhHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhccccccccceEEecCC-CCHHHhhCCEEE Confidence 89999999999999999999999999999999999999999999999999866 899999999875 888999999999 Q ss_pred EEEEEEecCCccEEEEEEEEeecchhHHHHHHHHhcC Q lcl|Aclame:pro 630 ASMFIKPAKSINYIMLNFTAVATGSDFDEIIGPVNQA 666 (666) Q Consensus 630 ~~i~~~p~~p~e~i~~~~~~~~~~~~~~e~~~~~~~~ 666 (666) ++|+++|++|+|||+|++..... .|+|+++.|++- T Consensus 359 ~~i~~~p~~p~e~I~~~~~~~~~--~~~~l~~~v~a~ 393 (393) T protein:vir:10 359 IKYDYHWIPSLESLGLEQRVNDE--YVVDLVNTLKAL 393 (393) T ss_pred EEEEEEecCCcceEEEEEEEchH--HHHHHHHHHhcC Confidence 99999999999999999988766 599999999988 No 31 >protein:vir:96740 Length: 388 # NCBI annotation: phage tail sheath protein FI-like # Family: family:all:115 # MgeID: mge:1628 # MgeName: VP882 # Cross-refs: genbank:acc:YP_001039839;genbank:gi:126010913;genbank:GeneID:5076250 Probab=100.00 E-value=1.8e-90 Score=512.54 Aligned_cols=376 Identities=15% Similarity=0.132 Sum_probs=312.1 Q ss_pred CceecCceEEEEec-CCccccccCcCceEEEEeccCC----CCCcCEEeCCHHHHHHHcCCcCCCchhHHHHHHHHHhCC Q lcl|Aclame:pro 1 MTLLSPGFETKETT-LSTTIVQSATGRAALVGKFQWG----PAFQIIQVTNEVELVNKFGQPDNNTADYFMSGANFLQYG 75 (666) Q Consensus 1 ~~~~~PGVyvee~~-~~~~i~~v~tsv~~fvG~~~~G----pv~~p~~i~s~~~~~~~fG~~~~~~~~~~~~~~~f~ngg 75 (666) |+..+|||||+|++ ++++|..+.|++.+|||+++.+ |.++|++|.++.|+...||.......+..++..+|.++| T Consensus 4 ~~~~~hGv~v~ev~~g~~~i~~~~tavi~~Vgta~~ad~~~p~~~~~~i~~~~d~~~~~~~~~~~gtl~~al~~~~~~~~ 83 (388) T protein:vir:96 4 IDQFEHNGISIETHEPPPPMGPPGDNVVAWVVTAPDKHADVAFSVPFRVANTADAQYLDSTGNELGTGWHAASETLKKTS 83 (388) T ss_pred CCCCCCceEEEEcCCCcccccccCcceeEEEEecCCCccccccccceeeecchhhhhhhccccccccchhhhHhhhccCC Confidence 77778999999995 7899999999999999999875 899999999999999999988888889999999999999 Q ss_pred CeEEEEEcccCcccccccccccccceeeecccccccccccceeeeccccccccccccccccccceeEEeecccccccccc Q lcl|Aclame:pro 76 NDLRVVRVLNKEKAKNATALAGNIEFEITNEGSNYEVGDTIKIKHNRQDIETAGKVTKVDGDGKVKGVFIPTGKIIAHAK 155 (666) Q Consensus 76 ~~~~vvRv~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~a~ 155 (666) ..|+++|+..+.+.... . . T Consensus 84 ~~~~vv~v~~g~~~~at----------------------------------------------------~--a------- 102 (388) T protein:vir:96 84 VPQYFIVVPEGADDAAT----------------------------------------------------M--A------- 102 (388) T ss_pred ceEEEEEeccccccccc----------------------------------------------------c--c------- Confidence 99999998542111000 0 0 Q ss_pred ccceeeecccceeEEEeecccccceeeeeeeeeccceeeeeeccchhhccccceeeeeecccceeeeeecccccccccee Q lcl|Aclame:pro 156 AIGVYPELDGDWTAEFTSSSGNGSAALSVTKIVTDSGLLLTDLETSRANITNQTFLTKLQKYDMPAVSAIYAGEIGNSLE 235 (666) Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~A~~~g~~gn~i~ 235 (666) . +. |.+ T Consensus 103 --------------~---------------------------------------------------ii----g~~----- 108 (388) T protein:vir:96 103 --------------N---------------------------------------------------II----GGI----- 108 (388) T ss_pred --------------e---------------------------------------------------ee----eec----- Confidence 0 00 000 Q ss_pred eeeeccccccccccccccccccccccceeeeeeccCcCcccceeeecccccccceeeecccccccccccchhhhHhHhcc Q lcl|Aclame:pro 236 VEILARSAFKNTAPDLTMYPYGGERTAARNLIPYAPQNDNQYAFIVRRDGVVVESYVLSTLKGDKDVYGNSIYMDDFFGR 315 (666) Q Consensus 236 v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~et~~ls~~~~~~~~~~~~~~~~~~~~~ 315 (666) . . ..| T Consensus 109 -------------------------------------~-~-------~tg------------------------------ 113 (388) T protein:vir:96 109 -------------------------------------D-P-------TTG------------------------------ 113 (388) T ss_pred -------------------------------------c-c-------ccc------------------------------ Confidence 0 0 000 Q ss_pred cCceEEEEeccccccccceeeeecCcccccccccccccccccccchhhhhhhhhcchhh-cCccEEecccCCCchhHHHH Q lcl|Aclame:pro 316 GSSQYIYATAQGWVDGFSGIISLAGGVSANEATTGGVGADPFIGAMMQGWGLFAERESI-HVNLLIAGACAGEGDAFSTV 394 (666) Q Consensus 316 ~~s~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~ll~~p~~~~~~~~~~~v 394 (666) ..+++.++.+.. .++||++||++. ...| T Consensus 114 -----------------------------------------------~~~gl~al~~~~~~p~il~aPg~s~----~~~v 142 (388) T protein:vir:96 114 -----------------------------------------------RRTGIAALTECTERPTLIGAPGFSQ----NKAV 142 (388) T ss_pred -----------------------------------------------hhhHHHHhhhcccceeEEEeecccc----chHH Confidence 000111111111 257899998763 4579 Q ss_pred HHHHHHHhhccccEEEEEcCCccccccccccCCHHHHHHHHhhccccchhhcccCcceEEEEcCeEEEecCcCCceeEec Q lcl|Aclame:pro 395 QKHAVSIGDERQDCLVMVSPPRSTVVNIPVTTAIDNLIAWREGSGNYNENNMNINTTYAVIDGNYKYQYDKYNDVNRWVP 474 (666) Q Consensus 395 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~p~~~~~d~~~~~~~~~p 474 (666) +.+|+++|++++ +|+++|+|. .+.+++.+|+...+ ..+++|+|+++||||++++|+.++..+++| T Consensus 143 ~~al~~~~~~~~-~~~i~D~p~---------~~~~~~~~~~~~~~-----~~~~~s~~~~~~~P~~~~~d~~~~~~~~~p 207 (388) T protein:vir:96 143 IDALASMAKRLK-CRAVIDGPS---------GSTQDAIDLSGLLG-----GEGTGHDRVYMVDPMPAIYSRKAQGNIYVP 207 (388) T ss_pred HHHHHHHHhhcC-cEEEEeccC---------CchhHHHHHHhhhh-----ccCcCcceEEEEeCceeeecccCCceeeec Confidence 999999999885 689999874 24455666665432 346889999999999999999999999999 Q ss_pred hHHHHHHHHHhhhhcCCceecccceecceeeee---eeeeecCChhHHhhhhhccceEEEEecCCeEEEEcceecCCCcc Q lcl|Aclame:pro 475 LAADIAGLCARTDAVSQPWMSPAGYNRGQIMNV---VKLAIEPRKAHRDRLYQAAINPVIGAGGEGFILMGDKTATTVPS 551 (666) Q Consensus 475 ~s~~~ag~~a~~d~~~g~~~span~~~~~i~g~---~~~~~~~~~~~~~~Ln~~gIn~i~~~~g~G~~~wG~rT~~~~~~ 551 (666) ||+++||++||+| +||||||+++ ++.|+ +..+..+++.|++.||++|||||++|+++|+++||+||++ T Consensus 208 ~s~~~AG~~a~~D----~~~spaN~~i-~i~g~~~~~~~~~~~~~~~~~~Ln~~gI~~i~~~~~~G~~~wG~rT~~---- 278 (388) T protein:vir:96 208 PSTIAMGAVAAVK----PWESPGNQGV-LIQDVARVIDYNILDKSTEGDLLNRNGVSYFARTSMGGFSLIGNRTVT---- 278 (388) T ss_pred hHHHHHHHHHhhc----CcccccCeeE-EeeeecccccccccCChhhHHhhhhcCceEEEEecCCcEEEEcccccC---- Confidence 9999999999999 6999999987 46655 3445667889999999999999999999999999999984 Q ss_pred ccceeehhhHHHHHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHhcCCeeeeEEEEcccCCCHHHhhCCEEEEE Q lcl|Aclame:pro 552 PFDRINVRRLFNMLKKNIGDSSKYKLFENNDNFTRASFRMEVSQYLSTIRSLGGIYDFRVQCDTTNNTPDVIDRNEFVAS 631 (666) Q Consensus 552 ~~~~i~vrR~~~~i~~~~~~~~~~~v~epn~~~~~~~i~~~i~~~l~~l~~~gal~g~~v~~d~~~n~~~~i~~G~~~~~ 631 (666) |+||++||||+||+++|++.++|+|||||++.+|++|+++|+.||++||++|+|+||+++||+++||+++|++|+|+++ T Consensus 279 -~~~i~vrR~~~~i~~si~~~~~~~v~epn~~~~~~~i~~~i~~fL~~l~~~Gal~g~~~~~d~~~nt~~~i~~G~~~~~ 357 (388) T protein:vir:96 279 -GKFISFVGLEDAIARKLEAASQRAMSKQLTKSFMEQEIKKINLFMQDLVAAEIIPGGEVYLHPTLNTVERYKNGSWYIV 357 (388) T ss_pred -CcceeehhhHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeEEEEecCCCCHHHhhCCEEEEE Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred EEEEecCCccEEEEEEEEeecchhHHHHHHHHh Q lcl|Aclame:pro 632 MFIKPAKSINYIMLNFTAVATGSDFDEIIGPVN 664 (666) Q Consensus 632 i~~~p~~p~e~i~~~~~~~~~~~~~~e~~~~~~ 664 (666) |+++|++|+|||+|+++...+ +++|+++.|- T Consensus 358 i~~~p~~pae~I~~~~~~~~~--~~~~~~~~~~ 388 (388) T protein:vir:96 358 IDYGRYSPNEHMIFHLNAVDR--IVEEFIEEVL 388 (388) T ss_pred EEEEecCCcceEEEEEEEchH--HHHHHHHHhC Confidence 999999999999999988665 7788888877 No 32 >protein:vir:10336 Length: 386 # NCBI annotation: ORF39 # Family: family:all:115 # MgeID: mge:182 # MgeName: VHML # Cross-refs: genbank:acc:NP_758931;genbank:gi:27311206;genbank:GeneID:956116 Probab=100.00 E-value=2.3e-88 Score=501.05 Aligned_cols=376 Identities=18% Similarity=0.197 Sum_probs=299.2 Q ss_pred Cc-eecCceEEEEe-cCCccccccCcCceEEEEeccCC-----CCCcCEEeCCHHHHHHHcCCcCCCchhHHHHHHHHHh Q lcl|Aclame:pro 1 MT-LLSPGFETKET-TLSTTIVQSATGRAALVGKFQWG-----PAFQIIQVTNEVELVNKFGQPDNNTADYFMSGANFLQ 73 (666) Q Consensus 1 ~~-~~~PGVyvee~-~~~~~i~~v~tsv~~fvG~~~~G-----pv~~p~~i~s~~~~~~~fG~~~~~~~~~~~~~~~f~n 73 (666) |. |.+|||||+|+ ++++++.+++|++.+|||.++.+ |+++|++++|+.++...||+ ...+..++.++|.| T Consensus 1 M~~~~~~Gv~v~ev~~~~~~i~~v~tav~~~vg~a~~a~~~~~~~~~pv~i~s~~~~~~~~g~---~~tl~~a~~~~~~~ 77 (386) T protein:vir:10 1 MAEQYLHGAEVVEIDNGARPIRTAQSGVIGLVGTAPDADATAFPLNTPVLIAGSRREAAKLGA---GGTLPQAIDGIFDQ 77 (386) T ss_pred CccccCCCeEEEEcCCCcccccccCcceeEEEEecCCCCCcccccccceEecchHHHHhhcCC---CcchhHHHHHHhcc Confidence 55 88999999999 57899999999999999998875 89999999999999999984 45678899999999 Q ss_pred CCCeEEEEEcccCcccccccccccccceeeecccccccccccceeeeccccccccccccccccccceeEEeecccccccc Q lcl|Aclame:pro 74 YGNDLRVVRVLNKEKAKNATALAGNIEFEITNEGSNYEVGDTIKIKHNRQDIETAGKVTKVDGDGKVKGVFIPTGKIIAH 153 (666) Q Consensus 74 gg~~~~vvRv~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~ 153 (666) ||+.||++++..+.+..... ...+ T Consensus 78 gg~~~~vv~~~~~~~~~~t~------------------------------------------------------~~~i-- 101 (386) T protein:vir:10 78 TGAVVVVIRVDEGVDSAATQ------------------------------------------------------SNVI-- 101 (386) T ss_pred CceeEEEeeccccccccccc------------------------------------------------------hhhh-- Confidence 99999999874322111000 0000 Q ss_pred ccccceeeecccceeEEEeecccccceeeeeeeeeccceeeeeeccchhhccccceeeeeecccceeeeeeccccccccc Q lcl|Aclame:pro 154 AKAIGVYPELDGDWTAEFTSSSGNGSAALSVTKIVTDSGLLLTDLETSRANITNQTFLTKLQKYDMPAVSAIYAGEIGNS 233 (666) Q Consensus 154 a~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~A~~~g~~gn~ 233 (666) +. .. .. .... T Consensus 102 -----------g~--------------------~~-----------------------~~---------t~~~------- 111 (386) T protein:vir:10 102 -----------GK--------------------VD-----------------------AD---------TEQY------- 111 (386) T ss_pred -----------cc--------------------cc-----------------------cc---------cchh------- Confidence 00 00 00 0000 Q ss_pred eeeeeeccccccccccccccccccccccceeeeeeccCcCcccceeeecccccccceeeecccccccccccchhhhHhHh Q lcl|Aclame:pro 234 LEVEILARSAFKNTAPDLTMYPYGGERTAARNLIPYAPQNDNQYAFIVRRDGVVVESYVLSTLKGDKDVYGNSIYMDDFF 313 (666) Q Consensus 234 i~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~et~~ls~~~~~~~~~~~~~~~~~~~ 313 (666) .|. ... T Consensus 112 --------------------------------------------------tgl-----------------------~~l- 117 (386) T protein:vir:10 112 --------------------------------------------------TGI-----------------------LAL- 117 (386) T ss_pred --------------------------------------------------hhh-----------------------HHh- Confidence 000 000 Q ss_pred cccCceEEEEeccccccccceeeeecCcccccccccccccccccccchhhhhhhhhcchhhcCccEEecccCCCchhHHH Q lcl|Aclame:pro 314 GRGSSQYIYATAQGWVDGFSGIISLAGGVSANEATTGGVGADPFIGAMMQGWGLFAERESIHVNLLIAGACAGEGDAFST 393 (666) Q Consensus 314 ~~~~s~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ll~~p~~~~~~~~~~~ 393 (666) ......+ + ..++++.+|++. +... T Consensus 118 ~~~~~~~---------------------------------------------~-------~~p~i~~ap~~~----~~~~ 141 (386) T protein:vir:10 118 LSAENTV---------------------------------------------K-------VQPRILIAPGFS----NQKA 141 (386) T ss_pred hhhcccc---------------------------------------------c-------cccccccccccc----chhH Confidence 0000000 0 012334444443 3356 Q ss_pred HHHHHHHHhhccccEEEEEcCCccccccccccCCHHHHHHHHhhccccchhhcccCcceEEEEcCeEEEecCcCCceeEe Q lcl|Aclame:pro 394 VQKHAVSIGDERQDCLVMVSPPRSTVVNIPVTTAIDNLIAWREGSGNYNENNMNINTTYAVIDGNYKYQYDKYNDVNRWV 473 (666) Q Consensus 394 v~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~p~~~~~d~~~~~~~~~ 473 (666) +..+|..+|++++. +++.+++ .++.+++.+|++. ++|+|+++||||++++|+.++..+++ T Consensus 142 v~~~l~~~~~~~~~-~~~~~~~---------~~~~~~a~~~~~~----------~~s~~~~~~~p~~~v~~~~~~~~~~~ 201 (386) T protein:vir:10 142 VADQLVSVADTAAW-LCHSGWS---------NTTDAAAITYREL----------FGSRRCEVVDPWYKVWDVETSAHIIQ 201 (386) T ss_pred HHHHHHHhhcceEE-EEEeCCC---------CCchHHHHHhhhc----------ccccceEEecCceeeeccccccceee Confidence 77888888887754 4444433 4567778888864 67899999999999999999999999 Q ss_pred chHHHHHHHHHhhhhcCCceecccceecceeeeee---eeeecCChhHHhhhhhccceEEEEecCCeEEEEcceecCCCc Q lcl|Aclame:pro 474 PLAADIAGLCARTDAVSQPWMSPAGYNRGQIMNVV---KLAIEPRKAHRDRLYQAAINPVIGAGGEGFILMGDKTATTVP 550 (666) Q Consensus 474 p~s~~~ag~~a~~d~~~g~~~span~~~~~i~g~~---~~~~~~~~~~~~~Ln~~gIn~i~~~~g~G~~~wG~rT~~~~~ 550 (666) |||+++||++||+|.++||||||+|+++.++.+.. ..+...++.|++.||++||+++. +++|+++||+||++.+ T Consensus 202 p~s~~~ag~~a~~D~~~G~~~spaN~~l~gv~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~--~~~G~~~wG~rT~~~d- 278 (386) T protein:vir:10 202 PPSARHAGVMAKVHNTLGFWWSNSNQEILGIDGLCRPVDFKLDDPTCRANLLNAKEVTTTI--QQNGFRVWGDRTCSAD- 278 (386) T ss_pred chHHHHHHHHHHhhhcCCcEEccCCceeecccccceecccccccCcchhhhhhhcCcEEEE--cCCCEEEEcccccCCC- Confidence 99999999999999999999999999987776653 33455678899999999999874 6799999999999875 Q ss_pred cccceeehhhHHHHHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHhcCCeeeeEEEEcccCCCHHHhhCCEEEE Q lcl|Aclame:pro 551 SPFDRINVRRLFNMLKKNIGDSSKYKLFENNDNFTRASFRMEVSQYLSTIRSLGGIYDFRVQCDTTNNTPDVIDRNEFVA 630 (666) Q Consensus 551 ~~~~~i~vrR~~~~i~~~~~~~~~~~v~epn~~~~~~~i~~~i~~~l~~l~~~gal~g~~v~~d~~~n~~~~i~~G~~~~ 630 (666) ++|+||++|||++||+++|++.++|+|||||++.+|++|+++|+.||++||++|+|+||+|+||+++||+++|++|+|++ T Consensus 279 ~~~~~i~vrR~~~~i~~~~~~~~~~~v~e~~~~~~~~~i~~~i~~~L~~l~~~g~l~g~~v~~d~~~nt~~~~~~G~~~~ 358 (386) T protein:vir:10 279 SKWAFKNVVITNDMIADSLVRNHLWAVDRNITKTYVEDVTEGVNNYLRHLKNIGAIAGGECWVDPELNSPDQIQQGKVYF 358 (386) T ss_pred cccceeehhhHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeEEEEcccCCCHHHhhCCeEEE Confidence 59999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred EEEEEecCCccEEEEEEEEeecchhHHHHH Q lcl|Aclame:pro 631 SMFIKPAKSINYIMLNFTAVATGSDFDEII 660 (666) Q Consensus 631 ~i~~~p~~p~e~i~~~~~~~~~~~~~~e~~ 660 (666) +|+++|++|+|||+|++++... .|++++ T Consensus 359 ~i~~~p~~p~e~i~~~~~~~~~--~~~~~~ 386 (386) T protein:vir:10 359 DYDFSAYAPAEHITFRSHMVNG--YLTEVV 386 (386) T ss_pred EEEEEecCCceeEEEEEEEehh--HHHhhC Confidence 9999999999999999998876 699999 No 33 >protein:vir:5833 Length: 742 # NCBI annotation: similar to tail sheath protein # Family: family:all:661 # MgeID: mge:123 # MgeName: RM 378 # Cross-refs: genbank:acc:NP_835619;genbank:gi:30044022 Probab=100.00 E-value=4.5e-79 Score=450.08 Aligned_cols=586 Identities=20% Similarity=0.209 Sum_probs=304.3 Q ss_pred cCceEEEEecCCccccccCcCceEEEEeccCC-CCCcCEEeCCHHHHHHHcCCcCCCchhHHHHHHHHHhCCCeEEEEEc Q lcl|Aclame:pro 5 SPGFETKETTLSTTIVQSATGRAALVGKFQWG-PAFQIIQVTNEVELVNKFGQPDNNTADYFMSGANFLQYGNDLRVVRV 83 (666) Q Consensus 5 ~PGVyvee~~~~~~i~~v~tsv~~fvG~~~~G-pv~~p~~i~s~~~~~~~fG~~~~~~~~~~~~~~~f~ngg~~~~vvRv 83 (666) .=-|-|+|++.+.+.+---.-..++||.|.-- |-..|+.++ ..||.|. |+- .++ ..+--+-||.+.-|+|- T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~----~~~--~~~~~~~~~~~~~~~~~ 72 (742) T protein:vir:58 1 MYRVNVKEVDLSITPEVGTPVQTALVGAFDLPIPSELPVSVT-PDEFRRV-GST----ELS--LIADSLVGGQEVTVIRP 72 (742) T ss_pred CeeeeeeeeeeeeccccCCchhhheeeeecCCCCccccceec-hhHHhhc-ccc----eee--ehhhhhcCcceEEEEcc Confidence 23577899987654332222245788888763 556777776 4677553 431 111 22334567777777775 Q ss_pred ccCccccccccc---------------------------cccccee-eecccc------------ccccccccee----- Q lcl|Aclame:pro 84 LNKEKAKNATAL---------------------------AGNIEFE-ITNEGS------------NYEVGDTIKI----- 118 (666) Q Consensus 84 ~~~~~~~~a~~~---------------------------~~~~~~~-~~~~~~------------~~~~~~~~~~----- 118 (666) -+.+..-++... .+++... ...++. +...-+.+.+ T Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (742) T protein:vir:58 73 RGETQSLNAAFVVVGGYNVTLGAFNVFYLMFLGYDPQKGYTDVSYVDVQLAGTPTDTILFSYSLDGSSTTHSLTINLNAP 152 (742) T ss_pred CCcccccceeEEEEecceeeehhhheeeeeeeecccCCCcccceeEEEEEccCCCeeEEEeeecCCCcceeEEEEEeece Confidence 443332222110 0110000 000000 0000000001 Q ss_pred --eecccccccccc---------------ccccccccceeEEeec----------ccccccc----------ccccceee Q lcl|Aclame:pro 119 --KHNRQDIETAGK---------------VTKVDGDGKVKGVFIP----------TGKIIAH----------AKAIGVYP 161 (666) Q Consensus 119 --~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~----------t~~~~~~----------a~~~~~~~ 161 (666) .......+.+.. .+..-++.+.+...++ +...+.. ..-..++. T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (742) T protein:vir:58 153 SVTLPSNIVPLFFYYEPYTGSITLQSSVNYSGLTLNYTVSKATTPWVYFAEYGTPTSSLTLYKGFYLEGIDLNSFNKQFV 232 (742) T ss_pred eEeeccccceeeeEeccccceEEEeeecccCCCcccceeeeeecCcccccccCCCccceeeeecccccccccCcccceee Confidence 000000000000 1111112222211111 0000000 00000000 Q ss_pred e----------------cccceeEEEe---ecccccce------------eeeeeeeeccceeeeeeccchhhcccccee Q lcl|Aclame:pro 162 E----------------LDGDWTAEFT---SSSGNGSA------------ALSVTKIVTDSGLLLTDLETSRANITNQTF 210 (666) Q Consensus 162 ~----------------~~~~~~~~~~---~~~~~~~~------------a~~~~~~~~~~~~~~~~~~~a~~~~~~~~~ 210 (666) . ...+.+..+. .++..... ...+.....+.+.....-... T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------- 303 (742) T protein:vir:58 233 VSIENITVNREKGQVLYPSFDVVVHFRDIRGVSANTEYIRFRQVNLNPESPNYIERVIGNMTFEFDGERIV--------- 303 (742) T ss_pred EEEeeeeecccCCceeccceeEEEEEeeccCCCCCccceeeeeeecCCCCcceeeecccceeeeeccceee--------- Confidence 0 0000000000 00000000 000111111111111100000 Q ss_pred eeeecccceeeeeeccccccccc---eeeeeecc--------------ccccccccc-------------cccccccccc Q lcl|Aclame:pro 211 LTKLQKYDMPAVSAIYAGEIGNS---LEVEILAR--------------SAFKNTAPD-------------LTMYPYGGER 260 (666) Q Consensus 211 ~~~~~~~~~~~~~A~~~g~~gn~---i~v~v~~~--------------~~~~~~~~~-------------~~~~~~~~~~ 260 (666) ..|..-|+ +++.+... ......... +........| T Consensus 304 ---------------~g~~~~n~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~v~d~~~~~~~~~~v~~~~t~~~~~p 368 (742) T protein:vir:58 304 ---------------TGGEYPNQVPFLRVVVSQDIKQNVAGVEKWVPVGFEGIYSVGDFTVIVNELTNVSIPVTDSAIIP 368 (742) T ss_pred ---------------ecccccccccceeeEeccccCcCccceeEEEeccccccccccceeeeccccccceeeccccccCC Confidence 01111111 11111000 000000000 0000000000 Q ss_pred cceeeeeec-cCcCcccceeeecc-ccccc----ceeeecccccccccccchhhhHhHhcccCceEEEEeccccccccce Q lcl|Aclame:pro 261 TAARNLIPY-APQNDNQYAFIVRR-DGVVV----ESYVLSTLKGDKDVYGNSIYMDDFFGRGSSQYIYATAQGWVDGFSG 334 (666) Q Consensus 261 ~~~~~~~~~-~~~~~~~~~~~v~~-~g~~~----et~~ls~~~~~~~~~~~~~~~~~~~~~~~s~~i~~~~~~~~~~~~~ 334 (666) ......... ....+..+.+.... .|..+ ..+.++.........+.... .+.. .................... T Consensus 369 p~~~~~~e~v~~ngG~~f~v~s~~~~g~~i~~~~as~~~s~ln~~~~V~Gt~aa-~~~~-d~~t~~~v~s~~~alp~~a~ 446 (742) T protein:vir:58 369 PMRFTRIEQITLSGGASFSVISNQPYGFNIQDSRHSYWLSPFKDDELIIGTELV-LPAL-DVSTEFGVSSWEEALPEFSF 446 (742) T ss_pred cccccccceeecccCcceEEEEecccCcceeccCcceEEeccCCceEEEeehhh-cccc-ccchheeccccccccceeeE Confidence 000000000 00111111111100 01000 01111111111111111100 0000 00111111112222222233 Q ss_pred eeeecCcccccccc----ccccccccccc-chhhhhhhhhcchhhcCccEEecccCCCchhHHHHHHHHHHHhhccccEE Q lcl|Aclame:pro 335 IISLAGGVSANEAT----TGGVGADPFIG-AMMQGWGLFAERESIHVNLLIAGACAGEGDAFSTVQKHAVSIGDERQDCL 409 (666) Q Consensus 335 ~~~~~~g~~~~~~~----~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~ll~~p~~~~~~~~~~~v~~~~~~~~~~~~~~~ 409 (666) ...+.||.+..... .+.++.....+ ...+++|+.++.+..+++||++||+.. ..++.++.++|+..++|+ T Consensus 447 sv~laGG~dg~v~v~~~~~D~iG~~~~~d~~~adrTGL~ALlev~eVtILiAPG~t~-----~~v~aav~A~la~a~~Rl 521 (742) T protein:vir:58 447 LMPFQGGSDGYIRVDENEPDTIGRVKITPALLANYERLLPLLTEDQFDLVLTPYLTF-----ADHAGTVNAFINRAENRF 521 (742) T ss_pred EEeecCCccccccccCCCcccccccccccccccchhHHHHhhhcCCCcEEEEcCCCc-----hHHHHHHHHHHHhhcCCe Confidence 45566666543221 11111111111 123467888888888999999999964 234556666666554443 Q ss_pred -EEEcCCccccccccccCCHHHHHHHHhhccccchhhcccCcceEEEEcCeEEEecCcCCceeEechHHHHHHHHHhhhh Q lcl|Aclame:pro 410 -VMVSPPRSTVVNIPVTTAIDNLIAWREGSGNYNENNMNINTTYAVIDGNYKYQYDKYNDVNRWVPLAADIAGLCARTDA 488 (666) Q Consensus 410 -~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~p~~~~~d~~~~~~~~~p~s~~~ag~~a~~d~ 488 (666) +++|+|.. .++.+++.+|++ +++|+|+++||||+++.|+ +..+++|||+++||++||+|. T Consensus 522 ~vL~D~P~~-------~tt~~~A~a~r~----------~~nSsraaly~PwVkv~d~--~~~r~vPpSgaIAGL~ARtD~ 582 (742) T protein:vir:58 522 LYLFDIAGD-------DDTENLAISLAG----------YINSSFATTFFPWVRRLTN--KGMRTVPASLAAYRSIRTTDP 582 (742) T ss_pred EEEEecCCC-------CchHHHHHHHHh----------ccCCceEEEEeceeeeccC--CcceeechHHHHHHHHHHhcc Confidence 44555532 234566777775 4678999999999998764 677999999999999999999 Q ss_pred cCCceecccceecceeeeeeeeeecCChhHHhhhhhccceEEEEecCCeEEEEcceecCCCccccceeehhhHHHHHHHH Q lcl|Aclame:pro 489 VSQPWMSPAGYNRGQIMNVVKLAIEPRKAHRDRLYQAAINPVIGAGGEGFILMGDKTATTVPSPFDRINVRRLFNMLKKN 568 (666) Q Consensus 489 ~~g~~~span~~~~~i~g~~~~~~~~~~~~~~~Ln~~gIn~i~~~~g~G~~~wG~rT~~~~~~~~~~i~vrR~~~~i~~~ 568 (666) ++|+|+||+|+.+ +.+ ..+++.|++.||++|||||++| |+||++||+||+++.|++|+||+|||||+||+++ T Consensus 583 erGvw~SPANrgi--i~~-----~~~s~se~d~LN~~GINtIrsf-G~G~rlWGnRTlassDs~wryInVRRlfd~Ie~S 654 (742) T protein:vir:58 583 ETGLAPVGARRGV--VTG-----EPVRQVDWEDLYNNRINPIVRV-GNDVLLFGQKTMLNVNSALNRINVRRLLIVMRNR 654 (742) T ss_pred CCceEecCCccee--eec-----cccchhhHHHHhhCCceEEEEC-CCcEEEEcceecCCCCcccceEeehhhHHHHHHH Confidence 9999999999853 222 3467899999999999999998 6899999999997777899999999999999999 Q ss_pred HHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHhcCCeeeeEEEEcccCCCHHHhhCCEEEEEEEEEecCCccEEEEEEE Q lcl|Aclame:pro 569 IGDSSKYKLFENNDNFTRASFRMEVSQYLSTIRSLGGIYDFRVQCDTTNNTPDVIDRNEFVASMFIKPAKSINYIMLNFT 648 (666) Q Consensus 569 ~~~~~~~~v~epn~~~~~~~i~~~i~~~l~~l~~~gal~g~~v~~d~~~n~~~~i~~G~~~~~i~~~p~~p~e~i~~~~~ 648 (666) |++.++|+||||||+.+|++|+++|++||++||++|+|+||+|+||+ +||++||++|+|+++|+++|++|||||+|+|. T Consensus 655 I~~a~q~~VfEPNd~~L~~sIk~sInafL~~L~aqGALlGfrV~lDe-tNTpeDI~~Gklvv~I~vAP~~PAEfI~lrf~ 733 (742) T protein:vir:58 655 ISQILSSYLFENNTSENRLRAEALVRQYLESLRLRGAVTDYEVAIDS-VTTPTDIDNNTLRARVTVQPARSIEYIDITFV 733 (742) T ss_pred HHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeEEEEcC-CCCHHHhhCCEEEEEEEEEccCCcceEEEEEE Confidence 99999999999999999999999999999999999999999999995 68899999999999999999999999999999 Q ss_pred EeecchhHH Q lcl|Aclame:pro 649 AVATGSDFD 657 (666) Q Consensus 649 ~~~~~~~~~ 657 (666) +..++++|. T Consensus 734 it~tga~Fs 742 (742) T protein:vir:58 734 ITPTGVEIT 742 (742) T ss_pred EEecccccC Confidence 999999999 No 34 >protein:vir:79798 Length: 717 # NCBI annotation: tail sheath subunit # Family: family:all:12069 # MgeID: mge:1874 # MgeName: 0305phi8-36 # Cross-refs: genbank:acc:YP_001429630;genbank:gi:156564120;genbank:GeneID:5525563 Probab=100.00 E-value=4.8e-65 Score=373.21 Aligned_cols=624 Identities=14% Similarity=0.107 Sum_probs=319.6 Q ss_pred Cc-----eecCceEEEEecC----CccccccCcCceEEEEeccCCCCCcCEEeCCHHHHHHHcCCcCCCch------hHH Q lcl|Aclame:pro 1 MT-----LLSPGFETKETTL----STTIVQSATGRAALVGKFQWGPAFQIIQVTNEVELVNKFGQPDNNTA------DYF 65 (666) Q Consensus 1 ~~-----~~~PGVyvee~~~----~~~i~~v~tsv~~fvG~~~~Gpv~~p~~i~s~~~~~~~fG~~~~~~~------~~~ 65 (666) |+ .-.||+-+.--|+ .+.++...|--..+.|.+--|||.+||+|+-.. -+..||+....+- +-- T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 79 (717) T protein:vir:79 1 MAGFDQYQAIPGHNARFKDGNLNLKSDPNPRETESVVLLGTATDGPVMQPVRVTPET-AYNIFGKVAHENGVYNGATLLP 79 (717) T ss_pred CCchhhhhcCCCceeeeecCceecCCCCCccccceEEEEeeccCCcccCceeeChhH-HHhhhhhhhhhcccccchhhhH Confidence 54 2389999986664 345778888888999999999999999999544 4589998654442 222 Q ss_pred HHHHHHHhCCCeEEEEEcccCcccc---------ccccc----------ccccceeeecccccccccccceeeecccccc Q lcl|Aclame:pro 66 MSGANFLQYGNDLRVVRVLNKEKAK---------NATAL----------AGNIEFEITNEGSNYEVGDTIKIKHNRQDIE 126 (666) Q Consensus 66 ~~~~~f~ngg~~~~vvRv~~~~~~~---------~a~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (666) +.-.....|-.+....|+.+....+ +.+.. -+.+.++...+. ++.+..+..+++.+-..+ T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 158 (717) T protein:vir:79 80 KFEELWAAGNRDIRLMRTTGVNAVSSLLGTSYSKNSKEVAEDKLGGAQARGNVAATFTLPN-GGIVEATFLLKARGVIIP 158 (717) T ss_pred HHHHHHhcCCcceEEEEecchhHHHHHhhcccccchhhHHHHhhcccccccceEEEEEcCC-CceeeeeeeeeecceEeC Confidence 2223345688899999986533211 11110 012222222221 122222222222211111 Q ss_pred ccccccccccccceeEEeeccccccccccccceeee---cccceeEEEeecccccceeeeeeeeeccc--eeeeeeccch Q lcl|Aclame:pro 127 TAGKVTKVDGDGKVKGVFIPTGKIIAHAKAIGVYPE---LDGDWTAEFTSSSGNGSAALSVTKIVTDS--GLLLTDLETS 201 (666) Q Consensus 127 ~~~~~~~~~~~~~~~~~~~~t~~~~~~a~~~~~~~~---~~~~~~~~~~~~~~~~~~a~~~~~~~~~~--~~~~~~~~~a 201 (666) .......+......+....++.+...-.....++.. +...++- ....+-.....+....++. .........+ T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (717) T protein:vir:79 159 PNNYTLDVGTEEDMKAGTQPTFAQVLLNENVADMESEITVSYEFTY---KDAQGETKTSEVLDNNTDKDGKPMIAKGADV 235 (717) T ss_pred CCcceEeccChhhhhcCCCchhhhhhhccchhhccceeEEEEEEEe---ecccCcchhhhhhcCCCCCCCceeEEecccc Confidence 111111111111112222222221111111111100 0000000 0000000000111111111 1111111111 Q ss_pred hhcccccee-eeeecccceeeeeeccccccccceeeeeeccccccc-----cccccccccccccccceeeeeeccCcCcc Q lcl|Aclame:pro 202 RANITNQTF-LTKLQKYDMPAVSAIYAGEIGNSLEVEILARSAFKN-----TAPDLTMYPYGGERTAARNLIPYAPQNDN 275 (666) Q Consensus 202 ~~~~~~~~~-~~~~~~~~~~~~~A~~~g~~gn~i~v~v~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (666) ...+-...+ .+.....+.....|....-.++.+++...++-.... .+..+. ......-.-..+.. ...-+ T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~--g~~~n 311 (717) T protein:vir:79 236 TIKLEHVALAGLKLYADGIEVVDAKAFTVAGDQLTIHSNSKMKLGASLEAQYAYNLV--EVIQPVIELESIFG--GGVYN 311 (717) T ss_pred eeehhhhhhhhhHHhhcchhhhhhhheeeecceEEEEecCCcccchhhHHHHHhhHH--HhhccceEEeeccc--Cceee Confidence 111100000 011122233333444444555666665544311100 000000 00000000000000 11111 Q ss_pred cceeeecccc-cccceeeecccc-cccccccc----hhh------hHhHhcccCceEEEEeccccccccc-------eee Q lcl|Aclame:pro 276 QYAFIVRRDG-VVVESYVLSTLK-GDKDVYGN----SIY------MDDFFGRGSSQYIYATAQGWVDGFS-------GII 336 (666) Q Consensus 276 ~~~~~v~~~g-~~~et~~ls~~~-~~~~~~~~----~~~------~~~~~~~~~s~~i~~~~~~~~~~~~-------~~~ 336 (666) .+.+.+..++ .+.-++++..+. +....... ..+ ++.+-+.....+......+...... .-. T Consensus 312 ~~~~~v~~~D~~~~~~~t~~~~~~g~~~~~pl~~ts~dy~~~~~~vdgI~~~~~~~V~~~g~~s~a~a~~~~g~~s~d~a 391 (717) T protein:vir:79 312 DIMRKVESKDGAVTVTITKPESKRGMISEDPLVFKSGDYTNFKMLVDAINNHPFNNVVRARTKPEFEATFTSTLQAAADA 391 (717) T ss_pred eeeeEEecCCceEEEEEecccccCcceeccccccccCceeeeeeeecccccCchhheeeeecccccceeeeecccCchhh Confidence 2223333322 222222221111 11111100 000 1111111111111111111110000 001 Q ss_pred eecCccccccccccc----cccc-ccccchhhhhhhhhcchhhcCccEEecccCCCc---hhHHHHHHHHHHHhhcc--- Q lcl|Aclame:pro 337 SLAGGVSANEATTGG----VGAD-PFIGAMMQGWGLFAERESIHVNLLIAGACAGEG---DAFSTVQKHAVSIGDER--- 405 (666) Q Consensus 337 ~~~~g~~~~~~~~~~----~~~~-~~~~~~~~~~~l~~~~~~~~~~ll~~p~~~~~~---~~~~~v~~~~~~~~~~~--- 405 (666) .+.++.++....... .+.. ...++... .+.+...+.+++++++.|+...+. .....++.++++||+.+ T Consensus 392 ~f~Gg~dgl~~~~ee~Y~~lGgk~~d~g~lt~-~aays~LE~~dVDlVil~ga~adtt~ga~~d~va~alad~caalSal 470 (717) T protein:vir:79 392 KFSGGKDELSLDKEEMYKRLGGEKNEEGFVTK-QGAYQYLENYEVDYVIPLGVHADTKLIGKYDDFAYQLALACAVMSHY 470 (717) T ss_pred ccCCCccccccchhhhhccccccccccccccc-hhhhhhcCcceeEEEEecCccccccccchhhhHHHHHHHHHHHhhhc Confidence 233333332222111 0000 01111111 134445556779999999864322 34456788899999754 Q ss_pred -ccEEEEEcCCccccccccccCCHHHHHHHHhhccccch-----------------hhcccCcceEEEEcCeEEEecCcC Q lcl|Aclame:pro 406 -QDCLVMVSPPRSTVVNIPVTTAIDNLIAWREGSGNYNE-----------------NNMNINTTYAVIDGNYKYQYDKYN 467 (666) Q Consensus 406 -~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~s~~~~~~~p~~~~~d~~~ 467 (666) +.++.+++... +.......+.+|++.+..... ....+ +.|...++++..+..+.. T Consensus 471 ~r~ai~VI~l~s------p~D~~~AtVe~~~~kLs~~Aaa~~~~d~~~a~a~~~~~~~idi-s~y~~vv~~~~~iv~~~~ 543 (717) T protein:vir:79 471 NSVTIGIIPTTT------PSDISLAGVEEHVKKLENYANEFYMRDRFGNIIFDADRNKIDL-GQFIEVVAGPDFIVRNTR 543 (717) T ss_pred cccceeeecccc------ccccchhhHHHHHHHHHhhhhhhhhhcchhccccccccccccc-cceeeeeecceeEEEcCC Confidence 23344343211 112222333344433211100 00111 334444555444555566 Q ss_pred CceeEechHHHHHHHHHhhhhcCCceecccceecceeeeeeeeeecCChhHHhhhhhccceEEEEecCCeEEEEcceecC Q lcl|Aclame:pro 468 DVNRWVPLAADIAGLCARTDAVSQPWMSPAGYNRGQIMNVVKLAIEPRKAHRDRLYQAAINPVIGAGGEGFILMGDKTAT 547 (666) Q Consensus 468 ~~~~~~p~s~~~ag~~a~~d~~~g~~~span~~~~~i~g~~~~~~~~~~~~~~~Ln~~gIn~i~~~~g~G~~~wG~rT~~ 547 (666) +..+..||+|++||+ |..+|+|+||+|+. |.|+.++++.++..|++.||++|||||++++|+|+++||+||++ T Consensus 544 ~~~~~~p~AG~vAGl----dA~rGVwkSPANk~---I~GVvgLa~~lT~sE~d~Ln~aGIntIr~~~GrGirVWGaRTta 616 (717) T protein:vir:79 544 LGQMASTPDASYIGM----VSQLKTQSAPTNKP---LPSVTALRYTYSANQLNRLTKARFATFKYKQDGSIGVVDAPTSA 616 (717) T ss_pred CceeecCHHHHHHHH----HhcCCcccccccce---ecccccCcccCCHHHHHHHhhCCeEEEEEeCCceEEEEeeeecC Confidence 667888887666555 55689999999996 45677789999999999999999999999999999999999999 Q ss_pred CCccccceeehhhHHHHHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHhcCCeeeeEEEEcccCCCHHHhhCCE Q lcl|Aclame:pro 548 TVPSPFDRINVRRLFNMLKKNIGDSSKYKLFENNDNFTRASFRMEVSQYLSTIRSLGGIYDFRVQCDTTNNTPDVIDRNE 627 (666) Q Consensus 548 ~~~~~~~~i~vrR~~~~i~~~~~~~~~~~v~epn~~~~~~~i~~~i~~~l~~l~~~gal~g~~v~~d~~~n~~~~i~~G~ 627 (666) +++++|+||++||++++|+++|++.++|+|||||++.+|.+|+.+|+.||++||++|+|+||++.+ +||++++++|+ T Consensus 617 sd~sdWryInVRRl~D~Ie~sIr~al~~yVgEPNd~~tr~~Ik~sI~afL~~L~r~GAI~Gykvdv---tnT~~di~~G~ 693 (717) T protein:vir:79 617 HAGSDYTRLSTARIVKEAVNAVREVADPFIGEPNDTGNRNALTAAVDKRLSKMIENKALLGFDFRL---VVTPQQELLGE 693 (717) T ss_pred CCCcccceeehhhhHHHHHHHHHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHhcCceecceeeE---ecChhHhhCCE Confidence 888899999999999999999999999999999999999999999999999999999999999865 89999999999 Q ss_pred EEEEEEEEecCCccEEEEEEEEee Q lcl|Aclame:pro 628 FVASMFIKPAKSINYIMLNFTAVA 651 (666) Q Consensus 628 ~~~~i~~~p~~p~e~i~~~~~~~~ 651 (666) ++++|+++|++|+|||+|++..+. T Consensus 694 l~V~I~vaPv~PaEfI~ititITA 717 (717) T protein:vir:79 694 GSIELSLEAPNELRRLTTIVSLSA 717 (717) T ss_pred EEEEEEEEecCcccEEEEEEEEeC Confidence 999999999999999999998887 No 35 >protein:vir:63742 Length: 562 # NCBI annotation: Tsh # Family: family:all:2449 # MgeID: mge:1517 # MgeName: P100 # Cross-refs: genbank:gi:82547629;genbank:GeneID:3783475 Probab=100.00 E-value=1.1e-64 Score=371.17 Aligned_cols=539 Identities=14% Similarity=0.025 Sum_probs=312.6 Q ss_pred CceecCceEEEEec-CCccccccCcCceEEEEeccCCCCCcCEEeCCHHHHHHHcCCcCCCchhHHHHHHHHHhCCCeEE Q lcl|Aclame:pro 1 MTLLSPGFETKETT-LSTTIVQSATGRAALVGKFQWGPAFQIIQVTNEVELVNKFGQPDNNTADYFMSGANFLQYGNDLR 79 (666) Q Consensus 1 ~~~~~PGVyvee~~-~~~~i~~v~tsv~~fvG~~~~Gpv~~p~~i~s~~~~~~~fG~~~~~~~~~~~~~~~f~ngg~~~~ 79 (666) =-|+.|||||||.+ +.+++++++|++++|||.+++||++.|++|+||+||++.||+-.-..+..++...+|.|||++|| T Consensus 9 ~~~~~Pgv~~~~~~s~~~~~~~~~~~~~~~iG~a~~G~~~~~~~~~~~~~~~~~fg~g~l~~~i~~a~~~~~~~g~~~~~ 88 (562) T protein:vir:63 9 KPVSRPHTEISVDTSGIGGSSSGSEKILCLVGSATGGKPNAVYKVRNYSQAKSVFRSGELLDAIERAWNPGEGTGAGDIL 88 (562) T ss_pred CcccCCceEEEEecCCCcccCCCCCceEEEEEEeCCCCCceeEEEccHHHHHHHhcCCchHHHHHHhccccccCCceEEE Confidence 34679999999995 67899999999999999999999999999999999999998744333344445556689999999 Q ss_pred EEEcccCcccccccccccccceeeecccccccccccceeeeccccccccccccccccccceeEEeeccccccccccccce Q lcl|Aclame:pro 80 VVRVLNKEKAKNATALAGNIEFEITNEGSNYEVGDTIKIKHNRQDIETAGKVTKVDGDGKVKGVFIPTGKIIAHAKAIGV 159 (666) Q Consensus 80 vvRv~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~a~~~~~ 159 (666) +|||.+ +++++...+++.++.... +.+++.+++....+......+..+..--..... ..+.++.-..+ . T Consensus 89 ~~rv~~---a~~a~~~~~~~~~~a~~~---g~~~n~i~v~~~~~~~~~~~~~~v~~~~~~~~e----v~~~~g~V~~i-~ 157 (562) T protein:vir:63 89 AMRVEE---AKEATFEAEGVKVSSTIY---GADANDIQVALEDNTITGTKRLSIVFAKERVNQ----VYDNLGSIFSI-K 157 (562) T ss_pred EEEcCC---CccceeEecceeEEEeec---ccCCCeEEEEEecCCCCCCcceEEEecCCCcch----hhhhccceeee-e Confidence 999933 344455555555544444 456776666654333222222111100000000 00000000000 0 Q ss_pred eeecccceeEEEeecccccceeeeeeeeeccceeeeeeccchhhccccceeeeeecccceeeeeeccccccccceeeeee Q lcl|Aclame:pro 160 YPELDGDWTAEFTSSSGNGSAALSVTKIVTDSGLLLTDLETSRANITNQTFLTKLQKYDMPAVSAIYAGEIGNSLEVEIL 239 (666) Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~A~~~g~~gn~i~v~v~ 239 (666) +..........+...... ..+....-................ ...........+..+.+.+.+.+.-+|.+++... T Consensus 158 y~g~~~~~~~~v~~~~~~-~~a~~l~~~~g~~~v~~~~L~~g~---~~~~~~l~~~in~~~~~~aky~~~~gn~i~~~~~ 233 (562) T protein:vir:63 158 YKGTEASATFTVAVDPVT-FKATKLTLKAGDKTVKEYDLGSGA---YAETNVLISDINNLPDFEAKFFPIGDKNLTTDNF 233 (562) T ss_pred eecccccceEEEEecCcc-eeEEEEEeecCCcceeEEEecCCc---cchhHHHHHhhccccceEEEeeccCCceeeeecc Confidence 000000000000000000 000000000000000000000000 0000000111122233455566665665554322 Q ss_pred ccccccccccccccccccccccceeeeeeccCcCcccceeeecccccccceeeecccccccccccchhhhHhHhcccCce Q lcl|Aclame:pro 240 ARSAFKNTAPDLTMYPYGGERTAARNLIPYAPQNDNQYAFIVRRDGVVVESYVLSTLKGDKDVYGNSIYMDDFFGRGSSQ 319 (666) Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~et~~ls~~~~~~~~~~~~~~~~~~~~~~~s~ 319 (666) ...... +....... .+.+.. +......... T Consensus 234 d~~~~~-----------------------------~vkt~~~~-v~t~~~--------------------d~~~~~~~~~ 263 (562) T protein:vir:63 234 DAQIDV-----------------------------DIKTKEAY-VKAVGG--------------------DIEKQTAYNG 263 (562) T ss_pred cccccc-----------------------------chhhhhhh-hhhhhh--------------------hhhhcccccc Confidence 110000 00000000 000000 0000001111 Q ss_pred EEEEeccccc-cccceeeeecCcccccccccccccccccccchhhhhhhhhcchhhcCccEEecccCCCchhHHHHHHHH Q lcl|Aclame:pro 320 YIYATAQGWV-DGFSGIISLAGGVSANEATTGGVGADPFIGAMMQGWGLFAERESIHVNLLIAGACAGEGDAFSTVQKHA 398 (666) Q Consensus 320 ~i~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ll~~p~~~~~~~~~~~v~~~~ 398 (666) ++.....+.. ........|.||.++... .++.+.... .+..+.++|+++ .+..+++.++ T Consensus 264 ~v~~~~~~~~~la~~~~~~LtGG~dGt~~-----------~~~~~al~a---le~~~~~~i~~~------t~d~av~~~l 323 (562) T protein:vir:63 264 YVDFEFDRSKEIANFPLTKLTGGDNGTIP-----------ESWADKFSY---FANEGGYYLVPL------TSKQAVHAEA 323 (562) T ss_pred eeeeeeccccceecccceeeecCCCCCch-----------hhHHHHHHH---HHhCCcEEEEec------CCCHHHHHHH Confidence 1111111110 011122455666554221 122222222 233445555432 1345677888 Q ss_pred HHHhhcccc----EEEEEcCCccccccccccCCHHHHHHHHhhccccchhhcccCcceEEEEcCeEEEecCcCCceeEec Q lcl|Aclame:pro 399 VSIGDERQD----CLVMVSPPRSTVVNIPVTTAIDNLIAWREGSGNYNENNMNINTTYAVIDGNYKYQYDKYNDVNRWVP 474 (666) Q Consensus 399 ~~~~~~~~~----~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~p~~~~~d~~~~~~~~~p 474 (666) .+||+++++ ++++++.+ ...+++++.++.+ .+++.+.+.++|+....+. .+..+.+| T Consensus 324 ~a~vkr~~~~g~~~~aVlg~~--------~~~~~~~~~~~a~----------~~n~ervv~v~~~~~~~~~-~~~~~~~~ 384 (562) T protein:vir:63 324 LQFVRDCSYNGNPMRVFVGGG--------IGESMEQLFTRAI----------GLQNERAGLIGFSGTVKMD-DGRSLKMP 384 (562) T ss_pred HHHHHHHHhCCCcEEEEecCC--------CCCCHHHHHHHhh----------hcCCCcEEEEecCeeEECC-CCceeeec Confidence 888876655 77777654 3456677666544 4678999999999876655 45666777 Q ss_pred h---HHHHHHHHHhhhhcCCceecccceecceeeeeeeeeecCChhHHhhhhhccceEEEEecCCeEEEEcc-eec---- Q lcl|Aclame:pro 475 L---AADIAGLCARTDAVSQPWMSPAGYNRGQIMNVVKLAIEPRKAHRDRLYQAAINPVIGAGGEGFILMGD-KTA---- 546 (666) Q Consensus 475 ~---s~~~ag~~a~~d~~~g~~~span~~~~~i~g~~~~~~~~~~~~~~~Ln~~gIn~i~~~~g~G~~~wG~-rT~---- 546 (666) + ++++||++|..| +++||.|+.+. ..++...+++.|++.|+++|+++++..++++.++|.. +++ T Consensus 385 ~~~~aa~vAGl~A~~~----~~~SlT~~~i~----~~~v~~~~t~~e~~~li~~Gv~~l~~~~~~~v~~~~iv~~itT~t 456 (562) T protein:vir:63 385 GYMFAAQVAGLTCGLE----IGEAITFKNIA----IETLDTIYEGSQLDQLNESGIITAEFVRNRAVTNFRIVDDVTTFN 456 (562) T ss_pred hhHHHHHHHHHhhcCc----hhcCccceeec----cccccccCCHHHHHHHHhCCeEEEEEecCCcEEEEEeeccceecC Confidence 7 789999999888 88999998753 3466778999999999999999999988887777754 322 Q ss_pred CCCccccceeehhhHHHHHHHHHHHHH-HHHhhCCCCHHHHHHHHHHHHHHHHHHHhcCCeeeeEEEEcccCCCHHHhhC Q lcl|Aclame:pro 547 TTVPSPFDRINVRRLFNMLKKNIGDSS-KYKLFENNDNFTRASFRMEVSQYLSTIRSLGGIYDFRVQCDTTNNTPDVIDR 625 (666) Q Consensus 547 ~~~~~~~~~i~vrR~~~~i~~~~~~~~-~~~v~epn~~~~~~~i~~~i~~~l~~l~~~gal~g~~v~~d~~~n~~~~i~~ 625 (666) ...+..|++|+++|++|+|++.++..+ +||++|||+...|.+|+..+..||.+|+++|+|.+|... +-+..+.+ T Consensus 457 ~~~~~~~~ki~viRv~D~i~~dir~~~~~~yiGk~Nn~~~r~~v~~~i~~~L~~l~~~gaI~~~~~~-----dv~v~~~~ 531 (562) T protein:vir:63 457 DKTDPVKSEIGVGEANDFLVSELKISLDNEYIGTKIIDTSASLVKNFVQSFLDRKKLAKEIQDYSPE-----EVQVVIEG 531 (562) T ss_pred CCCCchhhhhhhhHHHHHHHHHHHHHHHhcCCccccChHHHHHHHHHHHHHHHHHHhCCcccCCCcc-----ceEEEecC Confidence 233458999999999999999998776 599999999999999999999999999999999998532 12223567 Q ss_pred CEEEEEEEEEecCCccEEEEEEEEeecchhH Q lcl|Aclame:pro 626 NEFVASMFIKPAKSINYIMLNFTAVATGSDF 656 (666) Q Consensus 626 G~~~~~i~~~p~~p~e~i~~~~~~~~~~~~~ 656 (666) ++++|++.++|+.|+|+|++++....+..+- T Consensus 532 d~~~v~~~v~pv~~mekIy~ti~~~~~~~~~ 562 (562) T protein:vir:63 532 DVARISLTVFPIRSMKKIEVSLVYRQQILTA 562 (562) T ss_pred CEEEEEEEEEEcccceEEEEEEEEeeeeecC Confidence 8899999999999999999998877665443 No 36 >protein:vir:80488 Length: 562 # NCBI annotation: Tsh # Family: family:all:2449 # MgeID: mge:1883 # MgeName: A511 # Cross-refs: genbank:acc:YP_001468473;genbank:gi:157325048;genbank:GeneID:5601446 Probab=100.00 E-value=2.9e-63 Score=363.47 Aligned_cols=539 Identities=14% Similarity=0.044 Sum_probs=316.0 Q ss_pred CceecCceEEEEec-CCccccccCcCceEEEEeccCCCCCcCEEeCCHHHHHHHcCCcCCCchhHHHHHHHHHhCCCeEE Q lcl|Aclame:pro 1 MTLLSPGFETKETT-LSTTIVQSATGRAALVGKFQWGPAFQIIQVTNEVELVNKFGQPDNNTADYFMSGANFLQYGNDLR 79 (666) Q Consensus 1 ~~~~~PGVyvee~~-~~~~i~~v~tsv~~fvG~~~~Gpv~~p~~i~s~~~~~~~fG~~~~~~~~~~~~~~~f~ngg~~~~ 79 (666) =.+..|||||||.+ +.+++++++|++++|||.+++||+++|++|+||+||++.||+-.-..+..++...||.|||++|| T Consensus 9 ~~~~~pgv~~~~~~s~~~~~~~~~~~~~~~ig~a~~G~~~~~~~~~~~~~~~~~f~~g~l~~~i~~a~~~~~~~g~~~~~ 88 (562) T protein:vir:80 9 KPVSRPHTEISVDTSGIGGSSSGSEKILCLVGSATGGKPNAVYKVRNYSQAKSVFRSGELLDAIERAWNPGEGTGAGDIL 88 (562) T ss_pred CcccCCceEEEEecCCcccCCCCCCceEEEEEEeCCCCcceeEEEccHHHHHHHhcCCChHHHHHHhcccccccCceEEE Confidence 34568999999995 67899999999999999999999999999999999999998755444455566667789999999 Q ss_pred EEEcccCcccccccccccccceeeecccccccccccceeeeccccccccccccccccccceeEEeeccccccccccccce Q lcl|Aclame:pro 80 VVRVLNKEKAKNATALAGNIEFEITNEGSNYEVGDTIKIKHNRQDIETAGKVTKVDGDGKVKGVFIPTGKIIAHAKAIGV 159 (666) Q Consensus 80 vvRv~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~a~~~~~ 159 (666) +|||.+ +.+++...+++.++.... +.+++.+++....+......+..+.--......++..-+..... . T Consensus 89 ~~rv~~---a~~a~~~~~~~~~~~~~~---g~~~n~i~v~~~~~~~~~~~~~~v~~~~~~~~ev~~~~g~v~~i-----~ 157 (562) T protein:vir:80 89 AMRVEE---AKEATFEAEGVKVSSTIY---GADANDIQVALEDNTITGTKRLSIVFAKERVNQVYDNLGSIFSI-----K 157 (562) T ss_pred EEEcCC---CCcceEEecceEEEEeec---ccCCCceEEEEecCCCCCCcceEEEecCCcceEEeeccCceeee-----e Confidence 999943 334444455555544444 45666666655433322222221111111111111100000000 0 Q ss_pred eeecccceeEEEeecccccceeeeeeeeeccceeeeeeccchhhccccceeeeeecccceeeeeeccccccccceeeeee Q lcl|Aclame:pro 160 YPELDGDWTAEFTSSSGNGSAALSVTKIVTDSGLLLTDLETSRANITNQTFLTKLQKYDMPAVSAIYAGEIGNSLEVEIL 239 (666) Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~A~~~g~~gn~i~v~v~ 239 (666) +..........+...... ..+....-............... ............+....+.+.+++.-+|.+++... T Consensus 158 y~g~~~~a~~~i~~~~~~-~~a~~l~~~~g~~~v~~~~l~~g---~~~~~~~l~~~i~~~~~~tAky~g~~~n~i~~~~~ 233 (562) T protein:vir:80 158 YKGTEASATFTVAVDPVT-FKATKLTLKAGDKTVKEYDLGSG---AYAETNVLISDINNLPDFEAKFFPIGDKNLTTDNF 233 (562) T ss_pred eccccccceeEEEecCcc-ceEEEEEEecCCcceeEEEeCCC---ccchhhhhhhhhccccceEEEecccCCceeeeccc Confidence 000000000000000000 00000000000000000000000 00000001111122233555566655565544221 Q ss_pred ccccccccccccccccccccccceeeeeeccCcCcccceeeecccccccceeeecccccccccccchhhhHhHhcccCce Q lcl|Aclame:pro 240 ARSAFKNTAPDLTMYPYGGERTAARNLIPYAPQNDNQYAFIVRRDGVVVESYVLSTLKGDKDVYGNSIYMDDFFGRGSSQ 319 (666) Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~et~~ls~~~~~~~~~~~~~~~~~~~~~~~s~ 319 (666) ....... ..... . .++...+. ......... T Consensus 234 d~~~~~~------------------------~kt~~---~------------~v~~~~~d-----------~~~~~~~n~ 263 (562) T protein:vir:80 234 DAQIDVD------------------------IKTKE---A------------YVKAVGGD-----------IEKQTAYNG 263 (562) T ss_pred ccchhhh------------------------cccce---e------------eeeehhhh-----------hhhcccccc Confidence 1000000 00000 0 00000000 000001111 Q ss_pred EEEEeccc-cccccceeeeecCcccccccccccccccccccchhhhhhhhhcchhhcCccEEecccCCCchhHHHHHHHH Q lcl|Aclame:pro 320 YIYATAQG-WVDGFSGIISLAGGVSANEATTGGVGADPFIGAMMQGWGLFAERESIHVNLLIAGACAGEGDAFSTVQKHA 398 (666) Q Consensus 320 ~i~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ll~~p~~~~~~~~~~~v~~~~ 398 (666) ++.....+ ..........|.||.++... .++.+.... .+..+.+.|+++. ...+++.++ T Consensus 264 ~v~~~~~~~~~la~~~~~~LtGG~dG~~~-----------~~~~dal~~---Le~~~~~~i~~~t------~d~ai~~~~ 323 (562) T protein:vir:80 264 YVEFEFDRSKEIANFPLTKLTGGDNGTIP-----------ESWADKFSY---FANEGGYYLVPLT------SKQAVHAEA 323 (562) T ss_pred eEEEEeccCccccccceeeeeCCCCCCcc-----------ccHHHHHHH---HHhCCcEEEEecC------CChHHHHHH Confidence 22111111 11111223466777665321 122333222 2334455555431 235688888 Q ss_pred HHHhhcccc----EEEEEcCCccccccccccCCHHHHHHHHhhccccchhhcccCcceEEEEcCeEEEecCcCCceeEec Q lcl|Aclame:pro 399 VSIGDERQD----CLVMVSPPRSTVVNIPVTTAIDNLIAWREGSGNYNENNMNINTTYAVIDGNYKYQYDKYNDVNRWVP 474 (666) Q Consensus 399 ~~~~~~~~~----~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~p~~~~~d~~~~~~~~~p 474 (666) .+||+++++ ++++++.+ .+.+++++.++.+ .+++++.++++|+..+.+. ++..+.+| T Consensus 324 ~a~vkr~r~~g~~~~aVvg~~--------~~~~~~~~~~~a~----------~~n~e~vv~v~~~~~~~~~-~~~~~~~~ 384 (562) T protein:vir:80 324 LQFVRDCSYNGNPMRVFVGGG--------IGESMEQLFTRAI----------GLQNERAGLIGFSGTVKMD-DGRSLKMP 384 (562) T ss_pred HHHHHHHHhCCCeEEEEecCC--------CCCCHHHHHHHhh----------hcCCCeEEEEecCeeEECC-CCceeeec Confidence 888887766 77777654 3566777776554 3678999999998876655 45556666 Q ss_pred h---HHHHHHHHHhhhhcCCceecccceecceeeeeeeeeecCChhHHhhhhhccceEEEEecCCeEEEEcc-e---ec- Q lcl|Aclame:pro 475 L---AADIAGLCARTDAVSQPWMSPAGYNRGQIMNVVKLAIEPRKAHRDRLYQAAINPVIGAGGEGFILMGD-K---TA- 546 (666) Q Consensus 475 ~---s~~~ag~~a~~d~~~g~~~span~~~~~i~g~~~~~~~~~~~~~~~Ln~~gIn~i~~~~g~G~~~wG~-r---T~- 546 (666) + ++++||++|+.| +++||.|+.+. + .++...+++.|++.|+++|++++++.++++.++|.. + |. T Consensus 385 ~~~~aa~vAGl~Ag~~----~~~S~T~~~i~---~-~~v~~~lt~~e~~~li~~G~l~l~~~~~~~v~~~riv~~itT~t 456 (562) T protein:vir:80 385 GYMFAAQVAGLTCGLE----IGEAITFKNIA---I-ETLDTIYEGSQLDQLNESGIITAEFVRNRAVTNFRIVDDVTTFN 456 (562) T ss_pred hhHHHHHHHHHHhcCc----cccCccceeec---c-ccccccCCHHHHHHHHhCCeEEEEEecCCcEEEEEeeccceecc Confidence 6 889999999988 88899999764 2 356778999999999999999999988877777622 2 22 Q ss_pred CCCccccceeehhhHHHHHHHHHHHHH-HHHhhCCCCHHHHHHHHHHHHHHHHHHHhcCCeeeeEEEEcccCCCHHHhhC Q lcl|Aclame:pro 547 TTVPSPFDRINVRRLFNMLKKNIGDSS-KYKLFENNDNFTRASFRMEVSQYLSTIRSLGGIYDFRVQCDTTNNTPDVIDR 625 (666) Q Consensus 547 ~~~~~~~~~i~vrR~~~~i~~~~~~~~-~~~v~epn~~~~~~~i~~~i~~~l~~l~~~gal~g~~v~~d~~~n~~~~i~~ 625 (666) ...+..|++|+++|++|+|++.+++.+ +||++|||+...|..|+..+..||.+|+++|+|.+|... +-+-++.+ T Consensus 457 ~~~~~~~~ki~viRv~D~i~~dir~~~~~~yIGk~Nn~~~r~~v~~~i~~~L~~l~~~gaI~~~~~~-----dv~v~~~~ 531 (562) T protein:vir:80 457 DKTDPVKSEIGVGEANDFLVSELKISLDNEYIGTKIIDTSASLVKNFVQSFLDRKKLAKEIQDYSPE-----EVQVVIEG 531 (562) T ss_pred CCCCchhhhhhhhHHHHHHHHHHHHHHHhcCCccccChHHHHHHHHHHHHHHHHHHhCCcccCCCcc-----ceEEEecC Confidence 233568999999999999999998886 689999999999999999999999999999999998532 12233577 Q ss_pred CEEEEEEEEEecCCccEEEEEEEEeecchhH Q lcl|Aclame:pro 626 NEFVASMFIKPAKSINYIMLNFTAVATGSDF 656 (666) Q Consensus 626 G~~~~~i~~~p~~p~e~i~~~~~~~~~~~~~ 656 (666) ++++|++.++|+.|+|+|.+++....+..+- T Consensus 532 d~~~v~~~v~Pv~~mekIy~ti~~~~~~~~~ 562 (562) T protein:vir:80 532 DIARISLTVFPIRSMKKIEVSLVYRQQILTA 562 (562) T ss_pred CEEEEEEEEEEcccceEEEEEEEEEeeeecC Confidence 8899999999999999999999877765443 No 37 >protein:vir:95741 Length: 587 # NCBI annotation: ORF011 # Family: family:all:2449 # MgeID: mge:1577 # MgeName: G1 # Cross-refs: genbank:acc:YP_240910;genbank:gi:66394960;genbank:GeneID:5132682 Probab=100.00 E-value=5.9e-62 Score=356.28 Aligned_cols=565 Identities=14% Similarity=0.078 Sum_probs=317.6 Q ss_pred CceecCceEEEEec-CCccccccCcCceEEEEeccCCCCCcCEEeCCHHHHHHHcCCcCCCchhHHHHHHHHHhCCCeEE Q lcl|Aclame:pro 1 MTLLSPGFETKETT-LSTTIVQSATGRAALVGKFQWGPAFQIIQVTNEVELVNKFGQPDNNTADYFMSGANFLQYGNDLR 79 (666) Q Consensus 1 ~~~~~PGVyvee~~-~~~~i~~v~tsv~~fvG~~~~Gpv~~p~~i~s~~~~~~~fG~~~~~~~~~~~~~~~f~ngg~~~~ 79 (666) =-+..|||||||.+ +..++++++|++++|||.++|||+++|++++||+||++.||+-.-....-++..+||.|||++|| T Consensus 9 ~~~~~pgv~~~~~~~~~~~~~~~~~~~~~~~g~a~~G~~~~~~~~~~~~~~~~~~~~g~l~~~~~~a~~~~~~~g~~~~~ 88 (587) T protein:vir:95 9 RPITRPHASIEVDTSGIGGSAGSSEKVFCLIGQAEGGEPNTVYELRNYSQAKRLFRSGELLDAIELAWGSNPNYTAGRIL 88 (587) T ss_pred cccccCceEEEEecCCccccCCCCCceEEEEEEeCCCCCceeEEeccHHHHHHHhcCcchHHHHHHHhccccCCCceEEE Confidence 33568999999995 57889999999999999999999999999999999999998844223333344444579999999 Q ss_pred EEEcccCcccccccccccccceeeecccccccccccceeeeccccccccccccccccccceeEEeeccccccccccccce Q lcl|Aclame:pro 80 VVRVLNKEKAKNATALAGNIEFEITNEGSNYEVGDTIKIKHNRQDIETAGKVTKVDGDGKVKGVFIPTGKIIAHAKAIGV 159 (666) Q Consensus 80 vvRv~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~a~~~~~ 159 (666) +|||.+.. +++...+++.+++. .++.+++.++++......+...+.............+...+....-. T Consensus 89 ~~rv~~~~---~a~~~~~~l~~~a~---~~G~~gN~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~si~----- 157 (587) T protein:vir:95 89 AMRIEDAK---PASAEIGGLKITSK---IYGNVANNIQVGLEKNTLSDSLRLRVIFQDDRFNEVYDNIGNIFTIK----- 157 (587) T ss_pred EEEcCCCc---eeEEEecCeEEEEe---cccccccceEEEEecCCCCCceeEEEEEecccceeeeeeccceeeee----- Confidence 99994433 34444455555544 45577888887766444444333332222211111111111000000 Q ss_pred eeecccceeEEEeecccccceeeeeeeeeccceeeeeeccchhhccccceeeeeecccceeeeeeccccccccceeeeee Q lcl|Aclame:pro 160 YPELDGDWTAEFTSSSGNGSAALSVTKIVTDSGLLLTDLETSRANITNQTFLTKLQKYDMPAVSAIYAGEIGNSLEVEIL 239 (666) Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~A~~~g~~gn~i~v~v~ 239 (666) +..........+-..... ..+....-.........+...... ...........+..+.+.|.+.+..++.+.+... T Consensus 158 y~g~~~~~~~~v~~~~~t-~~a~~~~l~~g~~~v~~yrL~~g~---~~~~~~~~~~in~~~~~tAky~g~~~~~i~~~~~ 233 (587) T protein:vir:95 158 YKGEEANATFSVEHDEET-QKASRLVLKVGDQEVKSYDLTGGA---YDYTNAIITDINQLPDFEAKLSPFGDKNLESSKL 233 (587) T ss_pred eeccccccceeeeecccc-eeeeeeeeecCCceEEEEEecCCc---hHHHHHHHHhhccccceEEEEecccCceeEEeec Confidence 000000000000000000 000000000000011111110000 0000111122233445677777777777765432 Q ss_pred ccccccccccccccccccccccceeeeeeccCcCcccceeeecccccccceeeecccccccccccchhhhHhHhcccCce Q lcl|Aclame:pro 240 ARSAFKNTAPDLTMYPYGGERTAARNLIPYAPQNDNQYAFIVRRDGVVVESYVLSTLKGDKDVYGNSIYMDDFFGRGSSQ 319 (666) Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~et~~ls~~~~~~~~~~~~~~~~~~~~~~~s~ 319 (666) ............. ...... .+....... ..+.......+...+... ... ....... T Consensus 234 ~~~~~~~v~~~~~-~v~a~~----~d~~~~~~~--~~~v~~~~~~g~~~~~~~----------------~~~-~~~~~~a 289 (587) T protein:vir:95 234 DKIENANIKDKAV-YVKAVF----GDLEKQTAY--NGIVSFEQLNAEGEVPSN----------------VEV-EAGEESA 289 (587) T ss_pred Ccccccceehhhh-hhhhhh----cceeeeeec--eeeeeeecccccceeccc----------------hhh-hhcccch Confidence 2110000000000 000000 000000000 000000000000000000 000 0000000 Q ss_pred EEEEeccccccccceeeeecCcccccccccccccccccccchhhhhhhhhcchhhcCccEEecccCCCchhHHHHHHHHH Q lcl|Aclame:pro 320 YIYATAQGWVDGFSGIISLAGGVSANEATTGGVGADPFIGAMMQGWGLFAERESIHVNLLIAGACAGEGDAFSTVQKHAV 399 (666) Q Consensus 320 ~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ll~~p~~~~~~~~~~~v~~~~~ 399 (666) ..................|.||.++... .++.+... ..+..+.++|+++. +..+++.++. T Consensus 290 ~~~~~~~~~~~a~~~~t~LtGG~dG~~~-----------~~y~~~l~---ale~~~~~~i~~~t------~d~~v~a~l~ 349 (587) T protein:vir:95 290 TVTATSPIKTIEPFELTKLKGGTNGEPP-----------ATWADKLD---KFAHEGGYYIVPLS------SKQSVHAEVA 349 (587) T ss_pred heeccccccceeccceeeeecCCCCCCc-----------ccHHHHHH---HHHhCCcEEEEecC------CCHHHHHHHH Confidence 0000000000011112336666554221 12333332 23344566665431 3356788888 Q ss_pred HHhhcccc----EEEEEcCCccccccccccCCHHHHHHHHhhccccchhhcccCcceEEEEcCeEEEecCcCCceeEech Q lcl|Aclame:pro 400 SIGDERQD----CLVMVSPPRSTVVNIPVTTAIDNLIAWREGSGNYNENNMNINTTYAVIDGNYKYQYDKYNDVNRWVPL 475 (666) Q Consensus 400 ~~~~~~~~----~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~p~~~~~d~~~~~~~~~p~ 475 (666) +||+++++ ++++++.+ .+.+.+++.+... .+|+.+.++++|+..+. ..++....+|| T Consensus 350 a~vk~~~~~g~~~~aVvg~~--------~~~~~~~~~~~a~----------~~n~ervi~v~~~~~~~-~~dg~~~~~~~ 410 (587) T protein:vir:95 350 SFVKERSDAGEPMRAIVGGG--------FNESKEQLFGRQE----------SLSNPRVSLVANSGTFV-MDDGRKNHVPA 410 (587) T ss_pred HHHHHHHhCCCcEEEEEcCC--------CCCCHHHHHHHHh----------hcCCCcEEEecccceEe-cCCCceeeech Confidence 88877655 77777643 3456777776554 46789999999986543 23456677777 Q ss_pred ---HHHHHHHHHhhhhcCCceecccceecceeeeeeeeeecCChhHHhhhhhccceEEEEecCCe---EEE-Ecceec-C Q lcl|Aclame:pro 476 ---AADIAGLCARTDAVSQPWMSPAGYNRGQIMNVVKLAIEPRKAHRDRLYQAAINPVIGAGGEG---FIL-MGDKTA-T 547 (666) Q Consensus 476 ---s~~~ag~~a~~d~~~g~~~span~~~~~i~g~~~~~~~~~~~~~~~Ln~~gIn~i~~~~g~G---~~~-wG~rT~-~ 547 (666) ++++||++|..| +++||.|+.+. ..++...+++.|++.|+++|+++++..++++ +++ .+=.|. . T Consensus 411 ~~~aa~vAGl~Ag~~----~~~SlT~~~i~----~~~v~~~~t~~e~e~ai~~Gvl~l~~~~~~~~~~vriv~~itT~t~ 482 (587) T protein:vir:95 411 YMVAVALGGLASGLE----IGESITFKPLR----VSSLDQIYESIDLDELNENGIISIEFVRNRTNTFFRIVDDVTTFND 482 (587) T ss_pred HHHHHHHHHHHhcCc----hhcCccceeee----cccccccCCHHHHHHHHhCCeEEEEEecCCcceEEEEeecceeccC Confidence 788999999888 77899998753 3456678999999999999999998877664 443 344443 2 Q ss_pred CCccccceeehhhHHHHHHHHHHHHH-HHHhhCCCCHHHHHHHHHHHHHHHHHHHhcCCeeeeEEEEcccCCCHHHhhCC Q lcl|Aclame:pro 548 TVPSPFDRINVRRLFNMLKKNIGDSS-KYKLFENNDNFTRASFRMEVSQYLSTIRSLGGIYDFRVQCDTTNNTPDVIDRN 626 (666) Q Consensus 548 ~~~~~~~~i~vrR~~~~i~~~~~~~~-~~~v~epn~~~~~~~i~~~i~~~l~~l~~~gal~g~~v~~d~~~n~~~~i~~G 626 (666) .++..|++|+++|++|+|++.+++.+ +||++|||+...|..|+..+..||.+|+++|+|.+|... +.+-++... T Consensus 483 ~~d~~~~~i~viRv~D~i~~dir~~~~~~~iGk~nn~~~r~~v~~~i~~~L~~l~~~gaI~~~~~~-----dv~v~~~~d 557 (587) T protein:vir:95 483 KSDPVKAEMAVGEANDFLVSELKVQLEDQFIGTRTINTSASIIKDFIQSYLGRKKRDNEIQDFPAE-----DVQVIVEGN 557 (587) T ss_pred CCCcchhhhhhhhhHHHHHHHHHHHHHhhCCccccchHHHHHHHHHHHHHHHHHHhCCcccCCCcc-----ceEEEecCC Confidence 34458999999999999999999886 689999999999999999999999999999999998542 122234566 Q ss_pred EEEEEEEEEecCCccEEEEEEEEeecchhH Q lcl|Aclame:pro 627 EFVASMFIKPAKSINYIMLNFTAVATGSDF 656 (666) Q Consensus 627 ~~~~~i~~~p~~p~e~i~~~~~~~~~~~~~ 656 (666) +++|++.++|+.|+|+|.+++..+.+.++- T Consensus 558 ~~~v~~~v~Pv~~mekI~vt~~~~~~~~~~ 587 (587) T protein:vir:95 558 EARISMTVYPIRSFKKISVSLVYKQQTLQA 587 (587) T ss_pred EEEEEEEEEEcccceEEEEEEEEeeeeecC Confidence 899999999999999999998876654332 No 38 >protein:vir:102819 Length: 648 # NCBI annotation: tail sheath protein # Family: family:all:2449 # MgeID: mge:1610 # MgeName: YS40 # Cross-refs: genbank:acc:YP_874082;genbank:gi:118197689;genbank:GeneID:4496011 Probab=100.00 E-value=5.5e-62 Score=356.42 Aligned_cols=584 Identities=14% Similarity=0.061 Sum_probs=287.6 Q ss_pred Ccee---------cCceEEEEec-CCccccccCcCceEEEEeccCCCCCcCEEeCCHHHHHHHcCCcCCCchhHHHHHHH Q lcl|Aclame:pro 1 MTLL---------SPGFETKETT-LSTTIVQSATGRAALVGKFQWGPAFQIIQVTNEVELVNKFGQPDNNTADYFMSGAN 70 (666) Q Consensus 1 ~~~~---------~PGVyvee~~-~~~~i~~v~tsv~~fvG~~~~Gpv~~p~~i~s~~~~~~~fG~~~~~~~~~~~~~~~ 70 (666) |+.. +|||||||++ +.++|+||+|++++|||.++|||+|+|++|+||.||++.||+ .++.+++++| T Consensus 1 ma~~~yf~~~~~~~PGVyvee~~sg~~~i~gv~tsva~fvG~a~~Gp~~~p~~v~s~~~~~~~fgg----g~l~~av~~~ 76 (648) T protein:vir:10 1 MAISVYFDGKLIKQLGAYVKTDLSAVKQINGVGTGIVALLGLAEGGETYKPYRLTSFAEAVSIFKG----GPLLEHIKAA 76 (648) T ss_pred CeeeeeeCCCCccCCceEEEEeccccccccCCCCceEEEEEeeCCCCCceeEEecCHHHHHHHhcC----ccHHHHHHHH Confidence 6554 4999999996 679999999999999999999999999999999999999996 4699999999 Q ss_pred HHhCCCeEEEEEcccCcccccccccccccceeeecccccccccccceeeec--cccccccccccccccccceeEEeeccc Q lcl|Aclame:pro 71 FLQYGNDLRVVRVLNKEKAKNATALAGNIEFEITNEGSNYEVGDTIKIKHN--RQDIETAGKVTKVDGDGKVKGVFIPTG 148 (666) Q Consensus 71 f~ngg~~~~vvRv~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~t~ 148 (666) |+|||++||+|||.+.+.+. ...+...+++. ..+.+++.+++.+. .+.+....+........... . T Consensus 77 F~nGg~~~~~vRv~~~~~a~---~~~~~~~~~a~---~~g~~gn~i~~~v~~~~~~~~~~~~l~v~~~~~~~~------~ 144 (648) T protein:vir:10 77 FIGGAGEVVAVRIGNPTTAS---VSIPVAQNTSD---TSPANLNFVSYEASTRSNQIYVSFDLDENFTSANEA------D 144 (648) T ss_pred HhCCCcEEEEEEcCCCcccc---eecceeEEeec---ccCCCCCceEEEEEEcCCCcCceeEEEEEecCCCcc------c Confidence 99999999999997654332 22223333333 33455665543332 22222222221111110000 0 Q ss_pred cccccccccceeeecccceeEEEeecccccceeeeee-eeec-cceeeeeeccchhhccccceeeeeecccceeeeeec- Q lcl|Aclame:pro 149 KIIAHAKAIGVYPELDGDWTAEFTSSSGNGSAALSVT-KIVT-DSGLLLTDLETSRANITNQTFLTKLQKYDMPAVSAI- 225 (666) Q Consensus 149 ~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~-~~~~-~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~A~- 225 (666) +.. ..........+...-. ... ...... ..+. ..+.+....+....... ... ........... T Consensus 145 d~~-----v~~i~~~~~~y~gt~~--~~t--~~v~~~~~~~~~~~~~~~~~~~~~~v~~~----~~~-~~~~~~~~v~~~ 210 (648) T protein:vir:10 145 DTI-----IFTIYQKHPDFSVTRE--TFT--FPRKFTTPTVLVKRGSTLFFVDRSIVNAA----LAA-GPAFQTALINLL 210 (648) T ss_pred cee-----EEEeccCCCcccccce--ecc--ccccccccccccccccceeecCccchhhh----hcc-Cccchhhhhhch Confidence 000 0000000000000000 000 000000 0000 00000000000000000 000 00000000000 Q ss_pred -cccccccceeeeeeccccccccccccccccccccccceeeeeeccCcCcccceeeeccccccc------ceeeeccccc Q lcl|Aclame:pro 226 -YAGEIGNSLEVEILARSAFKNTAPDLTMYPYGGERTAARNLIPYAPQNDNQYAFIVRRDGVVV------ESYVLSTLKG 298 (666) Q Consensus 226 -~~g~~gn~i~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~------et~~ls~~~~ 298 (666) ..-.|-. .+.+.... ...................... .. .....+....|.+. ..+.++.... T Consensus 211 ~~~~~~~~--~~~~~~~s--~~~~~d~~~~~~~~~a~~~~~~-----~~-~~~~~~~~~~gd~~~~~~~~~~~~~~~tp~ 280 (648) T protein:vir:10 211 KEQLQPTD--VVQIFDAS--DTNPVDIPLGLFVYEVLYGGLF-----GF-TKSRLVKTSFGTVDDLLSNPLLFNLSATPF 280 (648) T ss_pred hhhhhhhh--hheecccc--cccccccccccccccccchhhh-----cC-Ccchhhhhhhccccccccccceeccccccc Confidence 0000000 00000000 0000000000000000000000 00 00000000000000 0000000000 Q ss_pred ccccccchhhhHhHhcccCceEEEE---------ecccccc-ccceeeeecCcccccccccccc-cccccccchhhhhhh Q lcl|Aclame:pro 299 DKDVYGNSIYMDDFFGRGSSQYIYA---------TAQGWVD-GFSGIISLAGGVSANEATTGGV-GADPFIGAMMQGWGL 367 (666) Q Consensus 299 ~~~~~~~~~~~~~~~~~~~s~~i~~---------~~~~~~~-~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~~~~~~~~l 367 (666) .... ......... ........ ....... .....+.|.||.++........ +.....+++.+...+ T Consensus 281 ~~~~---~~~~~~~~~-~~~~~~~v~~~~~~~l~~~~~~p~~~~~~~t~L~GGtdG~~p~s~~~~~~~~~~~d~~d~l~~ 356 (648) T protein:vir:10 281 FDGS---DYQDYTSLS-DPANWFAKDAYTINHLVDTTINPHILATRIFSLSGGTNGDDGTGYYQTAVSNYINIWSQGLAT 356 (648) T ss_pred cccc---ceeeeeccc-cccceeeeeccchhhcccccccCcccccccceecccccCCCcccccccccccchhhHHHHhhh Confidence 0000 000000000 00000000 0000111 1122345788888766544221 122345667666666 Q ss_pred hhcchhhcCccEEec------ccCCCchhHHHHHHHHHHHhhccc------c---EEEEEcCCccccccccccCCHHHHH Q lcl|Aclame:pro 368 FAERESIHVNLLIAG------ACAGEGDAFSTVQKHAVSIGDERQ------D---CLVMVSPPRSTVVNIPVTTAIDNLI 432 (666) Q Consensus 368 ~~~~~~~~~~ll~~p------~~~~~~~~~~~v~~~~~~~~~~~~------~---~~~~~d~~~~~~~~~~~~~~~~~~~ 432 (666) +..++.+ -++.++ ..........+++.++++||..+. . .++++.++. .....+.. T Consensus 357 ~~~~~~~--~ivp~~~~~~~~~~~~~lt~~q~i~a~a~shv~~~s~~~~~~~r~~~~~~vg~~~--------~es~~~se 426 (648) T protein:vir:10 357 LEEEEVN--FVIPAYKFTNVTQLNDRLTIFKGIASTFLSHVQTMSQVNRRKARVGVFGLPAPSP--------NESVTASE 426 (648) T ss_pred ccCCCce--EEEeecccccccccccccCCccchHHHHHHHHHHhhhccccccccCeEEEeCCCC--------chhHHHHH Confidence 5544332 222222 222222344677788888876442 1 244433321 22322222 Q ss_pred HHH--hhccccchhhcccCcceEEE-EcCeEEEecCcCCceeEech---HHHHHHHHHhhhhcCCceecccceecceeee Q lcl|Aclame:pro 433 AWR--EGSGNYNENNMNINTTYAVI-DGNYKYQYDKYNDVNRWVPL---AADIAGLCARTDAVSQPWMSPAGYNRGQIMN 506 (666) Q Consensus 433 ~~~--~~~~~~~~~~~~~~s~~~~~-~~p~~~~~d~~~~~~~~~p~---s~~~ag~~a~~d~~~g~~~span~~~~~i~g 506 (666) .-+ ..++..+......+...++. .+.+... ..+++...+|| ++++||+++++. ++.||.||++.+ .+ T Consensus 427 ~~~~~~~~~~~~a~~~~~d~~~~~~~~~~~~~~--~~~G~~~~~p~~~~Aa~VAGl~a~l~----~~~s~T~k~i~~-~~ 499 (648) T protein:vir:10 427 YLYNRNILNTISAMFGGTDRAQAVVFPFYSNVF--NDEGKVELLGGEFFASYVAGMHANRE----PQDSITFLPISG-IG 499 (648) T ss_pred HHhhhhcccccceeeeecCCceEEeecccceeE--CCCCcEEecchhhHHHHHHhhhhccc----cccCcccceeec-cc Confidence 111 11111110000111112222 2222222 22456677888 778899998865 889999998752 33 Q ss_pred eeeeeecCChhHHhhhhhccceEEEEecCC----eEEEEcceecCC--CccccceeehhhHHHHHHHHHHHHH-HHHhhC Q lcl|Aclame:pro 507 VVKLAIEPRKAHRDRLYQAAINPVIGAGGE----GFILMGDKTATT--VPSPFDRINVRRLFNMLKKNIGDSS-KYKLFE 579 (666) Q Consensus 507 ~~~~~~~~~~~~~~~Ln~~gIn~i~~~~g~----G~~~wG~rT~~~--~~~~~~~i~vrR~~~~i~~~~~~~~-~~~v~e 579 (666) +.+.+.++++|++.|+++||+||.+++++ ++++-.+-|... ++..|+.|+++|++||+.+.+++.+ ++|+++ T Consensus 500 -id~~~~~t~~qld~L~~~Gv~~ie~~~~~~~~~~~rvv~gITT~~~~~~~~~~eisv~ri~D~l~~~vr~~l~~~fIG~ 578 (648) T protein:vir:10 500 -AEPLYNWTYTQKDDLISNRVLFVEKVKTSFGGIVYRIHHNPTTWLGPVTQGFQEFVLRRIDDFLQSYVYKNLQEQFIGR 578 (648) T ss_pred -cccccCCCHHHHHHHhcCCcEEEEEecCCcceeeEEEeccceeecCCCCcceeeeeeeehhhHHHHHHHHHHhhhcCcc Confidence 33347899999999999999999988764 466666666532 3467999999999999999998755 589999 Q ss_pred CCCHHHHHHHHHHHHHHHHHHHhcCCeeeeE---EEEcccCCCHHHhhCCEEEEEEEEEecCCccEEEEEEEEeecchh Q lcl|Aclame:pro 580 NNDNFTRASFRMEVSQYLSTIRSLGGIYDFR---VQCDTTNNTPDVIDRNEFVASMFIKPAKSINYIMLNFTAVATGSD 655 (666) Q Consensus 580 pn~~~~~~~i~~~i~~~l~~l~~~gal~g~~---v~~d~~~n~~~~i~~G~~~~~i~~~p~~p~e~i~~~~~~~~~~~~ 655 (666) ||++..|.+|++.|.+||.++++.++|++|. |.++ ++++++++++.++|++|++||.+++.-+.. .+ T Consensus 579 ~n~~~~~~~ik~~i~~~L~~~~~~~~I~~y~~~~v~~~--------~~~~vv~V~~~v~Pv~~i~~I~vti~it~~-~~ 648 (648) T protein:vir:10 579 KSYGRKTENDIKVYTEALLSNLVGKQIVAYKDVKVTSN--------EDKTVYYVEFFYQPVTEIKFILVTMKVTFD-LE 648 (648) T ss_pred cccHHHHHHHHHHHHHHHhhHhhcCcccCcccceEEEE--------ecCCEEEEEEEEEecceeeEEEEEEEEEec-cC Confidence 9999999999999999999999999999974 4443 356999999999999999999998766543 22 No 39 >protein:vir:80779 Length: 569 # NCBI annotation: putative tail sheath protein # Family: family:all:2449 # MgeID: mge:1885 # MgeName: phiEF24C # Cross-refs: genbank:acc:YP_001504132;genbank:gi:158079319;genbank:GeneID:5666428 Probab=100.00 E-value=2.9e-60 Score=347.03 Aligned_cols=542 Identities=13% Similarity=0.063 Sum_probs=301.0 Q ss_pred Cc--------eecCceEEEEec-CCccccccCcCceEEEEeccCCCCCcCEEeCCHHHHHHHcCC--cCCCchhHHHHHH Q lcl|Aclame:pro 1 MT--------LLSPGFETKETT-LSTTIVQSATGRAALVGKFQWGPAFQIIQVTNEVELVNKFGQ--PDNNTADYFMSGA 69 (666) Q Consensus 1 ~~--------~~~PGVyvee~~-~~~~i~~v~tsv~~fvG~~~~Gpv~~p~~i~s~~~~~~~fG~--~~~~~~~~~~~~~ 69 (666) |+ ...|||||||.+ +.+++++++|++++|||.+++||+|+|++|+||+||.+.||+ +.+-.++.|.... T Consensus 1 ~~~~~~~~~~~~~Pgv~~~~~~~~~~~~~~~~~~~~~~ig~a~~G~~~~~~~~~~~~~~~~~f~~g~l~~a~~~a~~~~~ 80 (569) T protein:vir:80 1 MAVEQFPRKKVSRPHTEITVDTSGIGGSSSSSDKTLMLVGSAKGGKPDTVYRFRNYQQAKQVLRSGDLLDAIELAWNASD 80 (569) T ss_pred CeeeeecCCccccCceEEEEecCCCcCCCCCCceeEEEEEEeCCCCCceeEEecCHHHHHHHhcCCchhHHHHhhccCcc Confidence 43 458999999995 678899999999999999999999999999999999999965 4444455666666 Q ss_pred HHHhCCCeEEEEEcccCcccccccccccccceeeecccccccccccceeeeccccccccccccccccccceeEEeecccc Q lcl|Aclame:pro 70 NFLQYGNDLRVVRVLNKEKAKNATALAGNIEFEITNEGSNYEVGDTIKIKHNRQDIETAGKVTKVDGDGKVKGVFIPTGK 149 (666) Q Consensus 70 ~f~ngg~~~~vvRv~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~ 149 (666) +|.|||+.||++|+.+. .+++...+++.++....+ .+++.+.++...+......+.+... .... T Consensus 81 ~~~~~~~~~~~~rv~~a---~~a~~~~~~~~~~a~~~g---~~~n~i~v~l~~~~~~~~~~~~v~~---------~~~~- 144 (569) T protein:vir:80 81 VNTASAGDILAVRVEDA---KNATLTKGGLTFASTIYG---VDANEIQVALEDNNLTHTKRLTVAF---------SKDG- 144 (569) T ss_pred ccccCceEEEEEEcCCC---eeeeeeccceeeeeeecc---CCCceEEEEEecCcCCcceeeEEee---------ecCC- Confidence 67899999999999432 233333333333333332 2344444433222111111111000 0000 Q ss_pred ccccccccceeeecccceeEEEeecccccceeeeeeeeeccceeeeeeccchhhccccceeeeeecccceeeeeeccccc Q lcl|Aclame:pro 150 IIAHAKAIGVYPELDGDWTAEFTSSSGNGSAALSVTKIVTDSGLLLTDLETSRANITNQTFLTKLQKYDMPAVSAIYAGE 229 (666) Q Consensus 150 ~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~A~~~g~ 229 (666) .......++. ..+........+..+.... ......... ......+. T Consensus 145 --------------~~~~~~~ig~-------v~si~ytg~~~~a~~~~~~---~~~~~~a~~----------l~~~~g~~ 190 (569) T protein:vir:80 145 --------------YKKVFDNLGK-------IFSIQYKGSEAQANFTIAQ---DSISKKATT----------LTLNVGSE 190 (569) T ss_pred --------------Cccccccccc-------eeeEEEeeccccceEEeec---CcCcceeEE----------EEEEecCC Confidence 0000000000 0000000000000000000 000000000 00000000 Q ss_pred cccceeeeeecccccc-ccccccccccccccccceeeeeeccCcCcccceeeecccccccceeeecccccccccccchhh Q lcl|Aclame:pro 230 IGNSLEVEILARSAFK-NTAPDLTMYPYGGERTAARNLIPYAPQNDNQYAFIVRRDGVVVESYVLSTLKGDKDVYGNSIY 308 (666) Q Consensus 230 ~gn~i~v~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~et~~ls~~~~~~~~~~~~~~ 308 (666) .....++......... .....+...... .+.....+.... +............ .+..++... ..... T Consensus 191 ~~~~~~v~~~~~~~~~~~~~~~lv~~~~~-~~~f~a~~~~~~---~~~~~~~~~d~~~---~~~~~t~~~-----~~~~~ 258 (569) T protein:vir:80 191 PESTTEVMKYELGQGVYSETNVLVSAINS-LPDWEAKFFPIG---DKNLPTDALEAVT---KVDVKTEAV-----FVGAL 258 (569) T ss_pred cceeEEEEeeccCCccchhhhhhhhhcCC-ccCceEEEEecC---CCcceehhccchh---heeccccce-----eeehh Confidence 0000000000000000 000000000000 000000000000 0000000000000 000000000 00001 Q ss_pred hHhHhcc-cCceEEEEecccccc-ccceeeeecCcccccccccccccccccccchhhhhhhhhcchhhcCccEEecccCC Q lcl|Aclame:pro 309 MDDFFGR-GSSQYIYATAQGWVD-GFSGIISLAGGVSANEATTGGVGADPFIGAMMQGWGLFAERESIHVNLLIAGACAG 386 (666) Q Consensus 309 ~~~~~~~-~~s~~i~~~~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ll~~p~~~~ 386 (666) ..++.+. ....++.....+... .......|.||.++.. ..++.+... ..+.+++++|+++. T Consensus 259 ~~di~~~~~~~~~v~~~~~~~~~l~~~~~~~LtGG~dG~~-----------~~~~~~~l~---~le~~~~~~i~~~t--- 321 (569) T protein:vir:80 259 AGDIAKQLEYNDYVTVAVDATKPVEDFELTNLTGGSDGTA-----------PESWANKFP---LLANEGGYYLVPLT--- 321 (569) T ss_pred HHHHHHhhcCCceEEEEecCCcceeeecceeecCCCCCCc-----------cchHHHHHH---HHhhCCcEEEEecC--- Confidence 1111111 112233332222111 1122245666665321 112333332 33345567766532 Q ss_pred CchhHHHHHHHHHHHhhcccc----EEEEEcCCccccccccccCCHHHHHHHHhhccccchhhcccCcceEEEEcCeEEE Q lcl|Aclame:pro 387 EGDAFSTVQKHAVSIGDERQD----CLVMVSPPRSTVVNIPVTTAIDNLIAWREGSGNYNENNMNINTTYAVIDGNYKYQ 462 (666) Q Consensus 387 ~~~~~~~v~~~~~~~~~~~~~----~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~p~~~~ 462 (666) +..+++.++.+||+++++ ++++++.+ .+.+++++.++.+ +++++|.++++||..+ T Consensus 322 ---~d~av~~~l~a~vkr~r~~g~~~~aVvg~~--------~~~~~~~~~~~a~----------~~n~e~vv~v~~~~~~ 380 (569) T protein:vir:80 322 ---DKQAVHSEALAFVKDRTDNGDPMRIIVGGG--------TNETVEESITRAT----------NLRDPRASLVGFSGTR 380 (569) T ss_pred ---CChHHHHHHHHHHHHHHhCCCcEEEEecCC--------CCCCHHHHHHHHh----------hcCCCeEEEEecCcee Confidence 345688999999988865 78877754 3456777777665 4789999999999888 Q ss_pred ecCcCCceeEech---HHHHHHHHHhhhhcCCceecccceecceeeeeeeeeecCChhHHhhhhhccceEEEEecCCeEE Q lcl|Aclame:pro 463 YDKYNDVNRWVPL---AADIAGLCARTDAVSQPWMSPAGYNRGQIMNVVKLAIEPRKAHRDRLYQAAINPVIGAGGEGFI 539 (666) Q Consensus 463 ~d~~~~~~~~~p~---s~~~ag~~a~~d~~~g~~~span~~~~~i~g~~~~~~~~~~~~~~~Ln~~gIn~i~~~~g~G~~ 539 (666) .+. ++..+.+|+ ++++||++|..+ +++||.|+.+. ..++...+++.|++.|+++|+.++++.+++..+ T Consensus 381 ~~~-~g~~~~~~~~~~aa~vAG~~A~~~----~~~S~T~k~i~----~~~i~~~lt~~e~~~li~~G~~~l~~~~~~~~~ 451 (569) T protein:vir:80 381 KMD-DGRLLKLPGYMMASQIAGIASGLE----VGEAITFKHFN----VTSVDRVFESSQLDMLNESGVISIEFVRNRTLT 451 (569) T ss_pred ecC-CCcceeechhhHHHHHHHHHhcCc----cccCccceeec----cccccccCCHHHHHHHHhCCeEEEEEecCceEE Confidence 764 345556665 677888888766 88999998753 346677899999999999999999998887777 Q ss_pred EEcc---eec--CCCccccceeehhhHHHHHHHHHHHHH-HHHhhCCCCHHHHHHHHHHHHHHHHHHHhcCCeeeeEEEE Q lcl|Aclame:pro 540 LMGD---KTA--TTVPSPFDRINVRRLFNMLKKNIGDSS-KYKLFENNDNFTRASFRMEVSQYLSTIRSLGGIYDFRVQC 613 (666) Q Consensus 540 ~wG~---rT~--~~~~~~~~~i~vrR~~~~i~~~~~~~~-~~~v~epn~~~~~~~i~~~i~~~l~~l~~~gal~g~~v~~ 613 (666) +|.. .|. ...+..|++++++|++|+|++.++... +||++|||+...|..|+..++.||.+||++|+|.+|... T Consensus 452 v~~~vn~itT~t~~~~~~~~~i~viRv~D~i~~dir~~~~~~yiGk~nn~~~r~~v~~~i~~~L~~l~~~gaI~~~~~~- 530 (569) T protein:vir:80 452 AFRVVQDVTTYNDKSDPVKNEMSVGEANDFLVSELKIELDNNFIGTKVIDTSASLIKNFIQSFLDNKKRAREIQDYTPE- 530 (569) T ss_pred EEEEeccceecCCCCCchhhhhhhhHHHHHHHHHHHHHHHhhcCcccCChhHHHHHHHHHHHHHHHHHhCCcccCCCcc- Confidence 7743 222 233468999999999999999998875 689999999999999999999999999999999998531 Q ss_pred cccCCCHHHhhCCEEEEEEEEEecCCccEEEEEEEEeecchhH Q lcl|Aclame:pro 614 DTTNNTPDVIDRNEFVASMFIKPAKSINYIMLNFTAVATGSDF 656 (666) Q Consensus 614 d~~~n~~~~i~~G~~~~~i~~~p~~p~e~i~~~~~~~~~~~~~ 656 (666) +-+.++..++++|++.++|+.|+|||++|+....+..+- T Consensus 531 ----dv~v~~~~d~~~v~~~v~Pv~~~ekI~~ti~~~~~~~~~ 569 (569) T protein:vir:80 531 ----EVQVVLEGDVASISMTVMPIRSLNKITVQLVYKQQILTA 569 (569) T ss_pred ----ceEEEecCCEEEEEEEEEEcccccEEEEEEEEeeeeecC Confidence 123345678999999999999999999999987765444 No 40 >protein:vir:99306 Length: 587 # NCBI annotation: putative major tail sheath protein # Family: family:all:2449 # MgeID: mge:1655 # MgeName: K # Cross-refs: genbank:acc:YP_024479;genbank:gi:48696438;genbank:GeneID:2948034 Probab=100.00 E-value=8.1e-60 Score=344.54 Aligned_cols=561 Identities=14% Similarity=0.078 Sum_probs=317.0 Q ss_pred CceecCceEEEEec-CCccccccCcCceEEEEeccCCCCCcCEEeCCHHHHHHHcCCcCCCchhHHHHHHHH----HhCC Q lcl|Aclame:pro 1 MTLLSPGFETKETT-LSTTIVQSATGRAALVGKFQWGPAFQIIQVTNEVELVNKFGQPDNNTADYFMSGANF----LQYG 75 (666) Q Consensus 1 ~~~~~PGVyvee~~-~~~~i~~v~tsv~~fvG~~~~Gpv~~p~~i~s~~~~~~~fG~~~~~~~~~~~~~~~f----~ngg 75 (666) =-+..|||||||.+ +..+++++++++++|||.++|||+++|++|+||+||++.||+ .++..++..+| .||| T Consensus 9 ~~~~~pgv~~~~~~~~~~~~~~~~~~~~~~~g~a~~G~~~~~~~~~~~~~~~~~~~~----g~l~~~~~~a~~~~~~~g~ 84 (587) T protein:vir:99 9 RPITRPHASIEVDTSGIGGSAGSSEKVFCLIGQAEGGEPNTVYELRNYSQAKRLFRS----GELLDAIELAWGSNPNYTA 84 (587) T ss_pred cccccCceEEEEecCCccccCCCCCceEEEEEEecCCccceeEEeccHHHHHHHhcC----cchHHHHHHHhccccCCCc Confidence 34568999999995 567899999999999999999999999999999999999987 33666666666 7899 Q ss_pred CeEEEEEcccCcccccccccccccceeeecccccccccccceeeeccccccccccccccccccceeEEeecccccccccc Q lcl|Aclame:pro 76 NDLRVVRVLNKEKAKNATALAGNIEFEITNEGSNYEVGDTIKIKHNRQDIETAGKVTKVDGDGKVKGVFIPTGKIIAHAK 155 (666) Q Consensus 76 ~~~~vvRv~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~a~ 155 (666) ++||++||.+.. +++...+++.++.. .++.+++.++++......+...+............++...+...... T Consensus 85 ~~~~~~rv~~~~---~a~~~~~~l~~~a~---~~G~~gN~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~~i~- 157 (587) T protein:vir:99 85 GRILAMRIEDAK---PASAEIGGLKITSK---IYGNVANNIQVGLEKNTLSDSLRLRVIFQDDRFNEVYDNIGNIFTIK- 157 (587) T ss_pred eEEEEEEcCCCc---eeEEEecCeEEEEe---eccccccceEEEEccCCCCcceeEEEEEecccceeeeeeccceeeEE- Confidence 999999994433 44444555555554 45577888888766554444433333222211111111111000000 Q ss_pred ccceeeecccceeEEEeecccccceeeeeeeeeccceeeeeeccchhhccccceeeeeecccceeeeeecccccccccee Q lcl|Aclame:pro 156 AIGVYPELDGDWTAEFTSSSGNGSAALSVTKIVTDSGLLLTDLETSRANITNQTFLTKLQKYDMPAVSAIYAGEIGNSLE 235 (666) Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~A~~~g~~gn~i~ 235 (666) +..........+...... ..+....-.........+..... ............+..+.+.|.+.+..++++. T Consensus 158 ----y~g~~~~a~~~v~~~~~t-~~a~~~~l~~g~~~v~~yrL~~g---~~~~~~~~~~~i~~~~~~tAky~~~~~~~i~ 229 (587) T protein:vir:99 158 ----YKGEEANATFSVEHDEET-QKASRLVLKVGDQEVKSYDLTGG---AYDYTNAIITDINQLPDFEAKLSPFGDKNLE 229 (587) T ss_pred ----eecccccceeeEeecCcc-eeeeeeeeecCCceeEEEEecCC---chHHHHHHHhhhccccceeEEeeccCCceeE Confidence 000000000000000000 00000000000000111111000 0000001111222334456677766666665 Q ss_pred eeeeccccccccccccccccccccccceeeeeeccCcCcccceeeecccccccceeeecccccccccccchhhhHhHhcc Q lcl|Aclame:pro 236 VEILARSAFKNTAPDLTMYPYGGERTAARNLIPYAPQNDNQYAFIVRRDGVVVESYVLSTLKGDKDVYGNSIYMDDFFGR 315 (666) Q Consensus 236 v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~et~~ls~~~~~~~~~~~~~~~~~~~~~ 315 (666) ............... ...+.... . + .... ........ ++...+..... ..... ... T Consensus 230 ~~~~~~~~~~~v~~~-------------~~~v~a~~-~-D-~~~~--~~~~~~~~--~~~~~g~~~~~---~~~~~-~~~ 285 (587) T protein:vir:99 230 SSKLDKIENANIKDK-------------AVYVKAVF-G-D-LEKQ--TAYNGIVS--FEQLNAEGEVP---SNVEV-EAG 285 (587) T ss_pred eecccccccceeeee-------------eeeeehhc-c-c-eeee--cccceeee--eeecccccchh---hhhhh-hhc Confidence 432211000000000 00000000 0 0 0000 00000000 00000000000 00000 000 Q ss_pred cCceEEEEeccccccccceeeeecCcccccccccccccccccccchhhhhhhhhcchhhcCccEEecccCCCchhHHHHH Q lcl|Aclame:pro 316 GSSQYIYATAQGWVDGFSGIISLAGGVSANEATTGGVGADPFIGAMMQGWGLFAERESIHVNLLIAGACAGEGDAFSTVQ 395 (666) Q Consensus 316 ~~s~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ll~~p~~~~~~~~~~~v~ 395 (666) ......................|.||.++... .++.+... ..+..+.++|+++. +..+++ T Consensus 286 ~~~~~~~~~~~~~~~a~~~~t~LtGG~dG~~~-----------~sy~~al~---ale~~~~~~i~~~t------~d~~i~ 345 (587) T protein:vir:99 286 EESATVTATSPIKTIEPFELTKLKGGTNGEPP-----------ATWADKLD---KFAHEGGYYIVPLS------SKQSVH 345 (587) T ss_pred cccceeeeeccccceecccceeeecCCCCCcc-----------ccHHHHHH---HHhhCCcEEEEecC------CCHHHH Confidence 01111111111111111112345566554221 12333322 22344566665431 335678 Q ss_pred HHHHHHhhcccc----EEEEEcCCccccccccccCCHHHHHHHHhhccccchhhcccCcceEEEEcCeEEEecCcCCcee Q lcl|Aclame:pro 396 KHAVSIGDERQD----CLVMVSPPRSTVVNIPVTTAIDNLIAWREGSGNYNENNMNINTTYAVIDGNYKYQYDKYNDVNR 471 (666) Q Consensus 396 ~~~~~~~~~~~~----~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~p~~~~~d~~~~~~~ 471 (666) .++.+||+++++ ++++++.+ .+.+.+++.++.. .+|+.+.+.++|+..+. ..++... T Consensus 346 a~l~a~vk~~r~~g~~~~aVlg~~--------~~~~~~~~~~~a~----------~~n~e~vi~v~~~~~~~-~~dg~~~ 406 (587) T protein:vir:99 346 AEVASFVKERSDAGEPMRAIVGGG--------FNESKEQLFGRQA----------SLSNPRVSLVANSGTFV-MDDGRKN 406 (587) T ss_pred HHHHHHHHHHHhCCCcEEEEecCC--------CCCCHHHHHHHhh----------hcCCCcEEEEeccceEe-cCCCcee Confidence 888888877755 77777654 3457777777654 36788999999976543 2345667 Q ss_pred Eech---HHHHHHHHHhhhhcCCceecccceecceeeeeeeeeecCChhHHhhhhhccceEEEEecCCe---EEE-Ecce Q lcl|Aclame:pro 472 WVPL---AADIAGLCARTDAVSQPWMSPAGYNRGQIMNVVKLAIEPRKAHRDRLYQAAINPVIGAGGEG---FIL-MGDK 544 (666) Q Consensus 472 ~~p~---s~~~ag~~a~~d~~~g~~~span~~~~~i~g~~~~~~~~~~~~~~~Ln~~gIn~i~~~~g~G---~~~-wG~r 544 (666) .+|+ ++++||++|..| +++||.|+.+. ..++...+++.|++.|+++|+++++..++++ +++ .+=. T Consensus 407 ~~~~~~~aa~vAGl~Ag~~----~~~SlT~~~i~----~~~v~~~~t~~e~e~li~~Gvl~l~~~~~~~~~~vriv~~It 478 (587) T protein:vir:99 407 HVPAYMVAVALGGLASGLE----IGESITFKPLR----VSSLDQIYESIDLDELNENGIISIEFVRNRTNTFFRIVDDVT 478 (587) T ss_pred eechHHHHHHHHHHHhcCc----hhcCccceeee----cccccccCCHHHHHHHHhCCeEEEEEecCCcceEEEEeecee Confidence 7777 688999999887 78899998753 3456778999999999999999998877654 443 3444 Q ss_pred ec-CCCccccceeehhhHHHHHHHHHHHHH-HHHhhCCCCHHHHHHHHHHHHHHHHHHHhcCCeeeeEEEEcccCCCHHH Q lcl|Aclame:pro 545 TA-TTVPSPFDRINVRRLFNMLKKNIGDSS-KYKLFENNDNFTRASFRMEVSQYLSTIRSLGGIYDFRVQCDTTNNTPDV 622 (666) Q Consensus 545 T~-~~~~~~~~~i~vrR~~~~i~~~~~~~~-~~~v~epn~~~~~~~i~~~i~~~l~~l~~~gal~g~~v~~d~~~n~~~~ 622 (666) |. ..++..|++|+++|++|+|++.+++.+ ++|++|||+...|..|+..|..||.+|++.|+|.+|... ..+-+ T Consensus 479 T~t~~~~~~~~~i~viRv~D~i~~di~~~~~~~yiGk~Nn~~~r~~i~~~i~~~L~~l~~~gaI~~~~~~-----dv~v~ 553 (587) T protein:vir:99 479 TFNDKSDPVKAEMAVGEANDFLVSELKVQLEDQFIGTRTINTSASIIKDFIQSYLGRKKRDNEIQDFPAE-----DVQVI 553 (587) T ss_pred eccCCCCchhhhhhhhhhHHHHHHHHHHHHHhhCCccccchHHHHHHHHHHHHHHHHHHhCCcccCCCcc-----ceEEE Confidence 43 234458999999999999999999886 689999999999999999999999999999999998542 11112 Q ss_pred hhCCEEEEEEEEEecCCccEEEEEEEEeecchhH Q lcl|Aclame:pro 623 IDRNEFVASMFIKPAKSINYIMLNFTAVATGSDF 656 (666) Q Consensus 623 i~~G~~~~~i~~~p~~p~e~i~~~~~~~~~~~~~ 656 (666) ....+++|++.++|+.|+|+|.+++....+..+- T Consensus 554 ~~~d~~~v~~~v~Pv~~mekIy~tv~~~~~~~~~ 587 (587) T protein:vir:99 554 VEGNEARISMTVYPIRSFKKISVSLVYKQQTLQA 587 (587) T ss_pred ecCCEEEEEEEEEEcccceEEEEEEEEEeeeecC Confidence 3455799999999999999999998887765433 No 41 >protein:vir:96586 Length: 587 # NCBI annotation: ORF011 # Family: family:all:2449 # MgeID: mge:1623 # MgeName: Twort # Cross-refs: genbank:acc:YP_238553;genbank:gi:66391266;genbank:GeneID:5130368 Probab=100.00 E-value=1.4e-57 Score=332.27 Aligned_cols=561 Identities=13% Similarity=0.058 Sum_probs=313.0 Q ss_pred CceecCceEEEEec-CCccccccCcCceEEEEeccCCCCCcCEEeCCHHHHHHHcCCcCCCchhHHHHHHHH----HhCC Q lcl|Aclame:pro 1 MTLLSPGFETKETT-LSTTIVQSATGRAALVGKFQWGPAFQIIQVTNEVELVNKFGQPDNNTADYFMSGANF----LQYG 75 (666) Q Consensus 1 ~~~~~PGVyvee~~-~~~~i~~v~tsv~~fvG~~~~Gpv~~p~~i~s~~~~~~~fG~~~~~~~~~~~~~~~f----~ngg 75 (666) =-+..||||||+.+ +-.+++++++++.+|||.+++||+++|++|++++||++.||+- .+..++.++| .||| T Consensus 9 ~~~~~Pgv~~~~~~~~~~~~~~~~~~~~~~iG~a~~g~~~~~~~~~~~~~~~~~~g~G----~l~~ai~~a~~~~~~~g~ 84 (587) T protein:vir:96 9 RPIQRPHASIEVDSSGIGGSASNSEKILCLIGKAEGGEPNTVYQVRNYAQAKSVFRSG----ELLDAIELAWGSNPQYTA 84 (587) T ss_pred CcccCCceEEEEecCCccCCCCCCCceEEEEEEecCCCCceeEEEcChHHHHHhhcCC----cHHHHHHHHhccCcCCCc Confidence 34568999999996 4567899999999999999999999999999999999999874 3666777777 6999 Q ss_pred CeEEEEEcccCcccccccccccccceeeecccccccccccceeeeccccccccccccccccccceeEEeecccccccccc Q lcl|Aclame:pro 76 NDLRVVRVLNKEKAKNATALAGNIEFEITNEGSNYEVGDTIKIKHNRQDIETAGKVTKVDGDGKVKGVFIPTGKIIAHAK 155 (666) Q Consensus 76 ~~~~vvRv~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~a~ 155 (666) +.||+|||.+.. +++....+...+ ....+.+++.++++..........+....-........+..-+.... T Consensus 85 ~~~~a~rv~~~~---~a~~~~~~~~~~---~~~~g~~~n~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~n~G~v~~--- 155 (587) T protein:vir:96 85 GKILAMRVEDAK---ASQLEKGGLRVT---SKIFGSVSNDIQVALEKNTITDSLRLRVVFQKDNYQEVFDNLGNIFS--- 155 (587) T ss_pred eEEEEEecCCCc---cceeeccccccc---ccccCCCCceEEEEEEeccCCCccceEEEEecCCceeeccccCceEE--- Confidence 999999995432 233333333332 22334566666666543322222222111000000000000000000 Q ss_pred ccceeeecccceeEEEeecccccceeeeeeeeeccceeeeeeccchhhccccceeeeeecccceeeeeecccccccccee Q lcl|Aclame:pro 156 AIGVYPELDGDWTAEFTSSSGNGSAALSVTKIVTDSGLLLTDLETSRANITNQTFLTKLQKYDMPAVSAIYAGEIGNSLE 235 (666) Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~A~~~g~~gn~i~ 235 (666) + .+......-...+...... ..+. ......+...+...+..... ...........+..+.+.+.++|.-+|.++ T Consensus 156 -i-~y~g~~~~a~~~~~~~~~~-~~A~--~l~l~gg~~~v~~yrl~~g~-~~~~~~~~~~~~~~~~~tAky~g~~~n~~~ 229 (587) T protein:vir:96 156 -I-NYKGEGEKATFSVEKDKET-QEAK--RLVLKVDEKEVKAYELNGGA-YSFTNEIITDINELPDFEAKLSPFGDKNLE 229 (587) T ss_pred -E-EecccccceeEeeccCccc-ceee--eeEEEecCceEEEEEeCCCc-hhhhhhhhhhhccccceEEEeecccCceeE Confidence 0 0000000000000000000 0000 00000110111111100000 001111122223345677888888888887 Q ss_pred eeeeccccccccccccccccccccccceeeeeeccCcCcccceeeecccccccceeeecccccccccccchhhhHhHhcc Q lcl|Aclame:pro 236 VEILARSAFKNTAPDLTMYPYGGERTAARNLIPYAPQNDNQYAFIVRRDGVVVESYVLSTLKGDKDVYGNSIYMDDFFGR 315 (666) Q Consensus 236 v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~et~~ls~~~~~~~~~~~~~~~~~~~~~ 315 (666) +.+........ ......+........... ..+...+...+.. ... ..... ..+... T Consensus 230 v~v~d~~~~~~-~k~~~~y~~t~~~di~~~---------~~~~~~~~~~~~~----------~~~---~~~~~-~~v~~~ 285 (587) T protein:vir:96 230 SRKLDEATDVD-IKGKAVYVKAVFGDIENQ---------TQYNQYVKFEQLP----------EQA---SEPSD-VEVHAE 285 (587) T ss_pred EEeeccccccc-cceEEEeehhhhhhhhhh---------hccccceeecccc----------chh---hhhhc-cccccc Confidence 76532110000 000000000000000000 0000000000000 000 00000 000000 Q ss_pred cCceEEEEeccccccccceeeeecCcccccccccccccccccccchhhhhhhhhcchhhcCccEEecccCCCchhHHHHH Q lcl|Aclame:pro 316 GSSQYIYATAQGWVDGFSGIISLAGGVSANEATTGGVGADPFIGAMMQGWGLFAERESIHVNLLIAGACAGEGDAFSTVQ 395 (666) Q Consensus 316 ~~s~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ll~~p~~~~~~~~~~~v~ 395 (666) ......................|.||.++... .++.+... ..+..++++|+++. +..+++ T Consensus 286 ~~~~~~~~~~~~~~~~~~~~~aLtGG~dG~~~-----------~~y~~~l~---ale~~~~~~i~~~t------~d~ai~ 345 (587) T protein:vir:96 286 TESATVTATSKPKAIEPFELTKLSGGTNGEPP-----------TSWSAKLE---KFKNEGGYYIVPLT------DRQSVH 345 (587) T ss_pred ccceeeeecccccccccccceeeecCCCCCCc-----------ccHHHHHH---HHhhCCcEEEEecC------CCHHHH Confidence 00111111111111111112235566554221 12333332 23445677776542 235688 Q ss_pred HHHHHHhhcccc----EEEEEcCCccccccccccCCHHHHHHHHhhccccchhhcccCcceEEEEcCeEEEecCcCCcee Q lcl|Aclame:pro 396 KHAVSIGDERQD----CLVMVSPPRSTVVNIPVTTAIDNLIAWREGSGNYNENNMNINTTYAVIDGNYKYQYDKYNDVNR 471 (666) Q Consensus 396 ~~~~~~~~~~~~----~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~p~~~~~d~~~~~~~ 471 (666) .++.+||+++++ ++++++.+ .+.+++++.+.+. .+|++|.++++++..+.+.. +... T Consensus 346 ~~l~a~vk~~r~~gk~~~aVlg~~--------~~~~~~~~~~~a~----------~~n~e~vi~v~~~~~~~~~~-~~~~ 406 (587) T protein:vir:96 346 SEVATFVKNRSDAGEPMRAIVGGG--------TSETKEKLFGRQA----------ILNNPRVALVANSGKFVMGN-GRIL 406 (587) T ss_pred HHHHHHHHHHHhCCCeEEEEecCC--------CCCCHHHHHHHHh----------hcCCCcEEEEecceEEecCC-Ccee Confidence 888888877755 77777654 3467777766554 47789999999988877653 3444 Q ss_pred Eech---HHHHHHHHHhhhhcCCceecccceecceeeeeeeeeecCChhHHhhhhhccceEEEEecCCeEEEEcc-eec- Q lcl|Aclame:pro 472 WVPL---AADIAGLCARTDAVSQPWMSPAGYNRGQIMNVVKLAIEPRKAHRDRLYQAAINPVIGAGGEGFILMGD-KTA- 546 (666) Q Consensus 472 ~~p~---s~~~ag~~a~~d~~~g~~~span~~~~~i~g~~~~~~~~~~~~~~~Ln~~gIn~i~~~~g~G~~~wG~-rT~- 546 (666) .+|+ ++++||++|..+ +++||.|+.+. + .++...+++.|++.|.++|+.+++..++++.++|.. +++ T Consensus 407 ~~~~~~~aa~vAG~~Ag~~----~~~S~T~~~~~---~-~~v~~~~t~~e~~~~i~~G~~~l~~~~~~~~~v~~~vnsit 478 (587) T protein:vir:96 407 QAPAYMVASAVAGLVSGLD----IGESITFKPLF---V-NSLDKVYESEELDELNENGIITIEFVRNRMTTMFRIVDDVT 478 (587) T ss_pred eechhhHHHHHHHHHhcCc----cccCccceeee---c-ccccccCCHHHHHHHHhCCeEEEEEecCCcEEEEEeeccce Confidence 4543 688999999887 78899998754 2 356678999999999999999999988877777743 333 Q ss_pred ---CCCccccceeehhhHHHHHHHHHHHHH-HHHhhCCCCHHHHHHHHHHHHHHHHHHHhcCCeeeeEEEEcccCCCHHH Q lcl|Aclame:pro 547 ---TTVPSPFDRINVRRLFNMLKKNIGDSS-KYKLFENNDNFTRASFRMEVSQYLSTIRSLGGIYDFRVQCDTTNNTPDV 622 (666) Q Consensus 547 ---~~~~~~~~~i~vrR~~~~i~~~~~~~~-~~~v~epn~~~~~~~i~~~i~~~l~~l~~~gal~g~~v~~d~~~n~~~~ 622 (666) ..++..|++|+++|++|+|.+.+++.+ ++|++|||+...|..|+..|..||.+|+++|+|.+|... +-+-+ T Consensus 479 T~t~~~~~~~~~i~virv~D~i~~di~~~~~~~yiGk~nn~~~r~~v~~~i~~~L~~l~~~g~I~~~~~~-----dv~v~ 553 (587) T protein:vir:96 479 TFPDKNDPVKSEMALGEANDFLVSELKILLEEQYIGTRTINTSASQIKDFVQSYLGRKKRDNEIQDFPPE-----DVQVI 553 (587) T ss_pred ecCCCCCchhhhhhhHHHHHHHHHHHHHHHHhcCCccccCHHHHHHHHHHHHHHHHHHHhCCcccCCCcc-----ceEEE Confidence 223457999999999999999999886 689999999999999999999999999999999998541 11112 Q ss_pred hhCCEEEEEEEEEecCCccEEEEEEEEeecchhH Q lcl|Aclame:pro 623 IDRNEFVASMFIKPAKSINYIMLNFTAVATGSDF 656 (666) Q Consensus 623 i~~G~~~~~i~~~p~~p~e~i~~~~~~~~~~~~~ 656 (666) +...+++|++.++|+.|+|+|.+++....+.++- T Consensus 554 ~~~D~~~v~~~v~Pv~~mekIy~tv~~~~~~~~~ 587 (587) T protein:vir:96 554 IEGNEARISLTIFPIRALKKISVSLVYRQQTLQA 587 (587) T ss_pred ecCCEEEEEEEEEEcccceEEEEEEEEEeeeecC Confidence 3455799999999999999999998855443322 No 42 >protein:vir:102957 Length: 437 # NCBI annotation: sheath tail protein # Family: family:all:632 # MgeID: mge:1461 # MgeName: EJ-1 # Cross-refs: genbank:acc:NP_945292;genbank:gi:39653727;uniprot:Q708M0;genbank:GeneID:2672871 Probab=100.00 E-value=1.4e-51 Score=299.38 Aligned_cols=417 Identities=14% Similarity=0.146 Sum_probs=271.5 Q ss_pred CceecCceEEEEec-CCccccccCcCceEEEEeccCCCCCcCEEeCCHHHHHHHcCCcCCCchhHHHHHHHHHhCCCeEE Q lcl|Aclame:pro 1 MTLLSPGFETKETT-LSTTIVQSATGRAALVGKFQWGPAFQIIQVTNEVELVNKFGQPDNNTADYFMSGANFLQYGNDLR 79 (666) Q Consensus 1 ~~~~~PGVyvee~~-~~~~i~~v~tsv~~fvG~~~~Gpv~~p~~i~s~~~~~~~fG~~~~~~~~~~~~~~~f~ngg~~~~ 79 (666) +...-|||||||++ ..++|++++|++++|+|.++|||+++|++|+||.||++.||... .+..+.+..+|++||+.|| T Consensus 9 ~~k~~PGvYi~~~~~~~~~i~~~~~~~~a~~~~~~~Gp~~~~~~i~s~~d~~~~fG~~~--~~~~~~~~~~~~~g~~~~~ 86 (437) T protein:vir:10 9 QNKVRPGAYINVKSKDIAMTRLGGDGVVTVPLALSFGQSKKLMKIRRGEDLFKKLGYEQ--ESPQLLLLNEAFKRVSEVL 86 (437) T ss_pred cceecCceeEEEecCCcceeeccCCcEEEEEEEecCCCCceeEEEecHHHHHHHcCCcc--chhHHHHHHHHhcCCCEEE Confidence 77789999999995 67899999999999999999999999999999999999999744 3455556667779999999 Q ss_pred EEEcccCcccccccccccccceeeecccccccccccceeeeccccccccccccccccccceeEEeeccccccccccccce Q lcl|Aclame:pro 80 VVRVLNKEKAKNATALAGNIEFEITNEGSNYEVGDTIKIKHNRQDIETAGKVTKVDGDGKVKGVFIPTGKIIAHAKAIGV 159 (666) Q Consensus 80 vvRv~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~a~~~~~ 159 (666) ++|+.+++.+. . + . T Consensus 87 ~~R~~~g~~a~---~----------------------------------------------t---l-------------- 100 (437) T protein:vir:10 87 LYRLNTGEKAN---V----------------------------------------------S---L-------------- 100 (437) T ss_pred EEECCCCceee---E----------------------------------------------e---e-------------- Confidence 99985421000 0 0 0 Q ss_pred eeecccceeEEEeecccccceeeeeeeeeccceeeeeeccchhhccccceeeeeecccceeeeeeccccccccceeeeee Q lcl|Aclame:pro 160 YPELDGDWTAEFTSSSGNGSAALSVTKIVTDSGLLLTDLETSRANITNQTFLTKLQKYDMPAVSAIYAGEIGNSLEVEIL 239 (666) Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~A~~~g~~gn~i~v~v~ 239 (666) .+...+.|.++|.|||+++|.+. T Consensus 101 ---------------------------------------------------------~~~~~~~A~~~G~~gn~i~v~v~ 123 (437) T protein:vir:10 101 ---------------------------------------------------------SDNVTAQAKYSGVRGNDITVTVK 123 (437) T ss_pred ---------------------------------------------------------ccceEEEeccCCcccceeEEEEe Confidence 00012456788999999888775 Q ss_pred ccccccccccccccccccccccceeeeeeccCcCcccceeeecccccccceeeecccccccccccchhhhHhHhcccCce Q lcl|Aclame:pro 240 ARSAFKNTAPDLTMYPYGGERTAARNLIPYAPQNDNQYAFIVRRDGVVVESYVLSTLKGDKDVYGNSIYMDDFFGRGSSQ 319 (666) Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~et~~ls~~~~~~~~~~~~~~~~~~~~~~~s~ 319 (666) ..... ...+.+.+...+...+...+....+. .+ .. T Consensus 124 ~~~~d-----------------------------~~~~~v~~~~~~~~~d~~~v~~~~~~-------------~~---n~ 158 (437) T protein:vir:10 124 TNVDD-----------------------------PSSFDVVTFLDTVVMDLQTVKVLADL-------------KN---NA 158 (437) T ss_pred eccCC-----------------------------ccceEEEEecCcceeeeeehhhhhhh-------------hh---hc Confidence 32110 01111222222222222111111000 00 00 Q ss_pred EEEEeccccccccceeeeecCcccccccccccccccccccchhhhhhhhhcchhhcCccEEecccCCCchhHHHHHHHHH Q lcl|Aclame:pro 320 YIYATAQGWVDGFSGIISLAGGVSANEATTGGVGADPFIGAMMQGWGLFAERESIHVNLLIAGACAGEGDAFSTVQKHAV 399 (666) Q Consensus 320 ~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ll~~p~~~~~~~~~~~v~~~~~ 399 (666) ++.....+. ........|.+|.++... ..++.+. +...+..+++.|++|.. ..++++++. T Consensus 159 ~v~~~~~~~-l~~~a~~~LtGG~dg~~t----------~~dy~~a---l~~le~~~~n~l~~~~~------d~~~~t~~~ 218 (437) T protein:vir:10 159 LVEFSGTGE-LQPVAGAKLTGGTDGAIS----------TQDYLEY---FKALETVEFNYMALPVE------DASIKKAAI 218 (437) T ss_pred ccccccccc-cccccceeeeccccCCCC----------hhHHHHH---HHHhccCcceEEEecCC------ChhHHHHHH Confidence 000011111 111122356666654211 1123332 33334567899999863 245677788 Q ss_pred HHhhccccE-----EEEEcCCccccccccccCCHHHHHHHHhhccccchhhcccCcceEEEEcCeEEEecCcCCceeEec Q lcl|Aclame:pro 400 SIGDERQDC-----LVMVSPPRSTVVNIPVTTAIDNLIAWREGSGNYNENNMNINTTYAVIDGNYKYQYDKYNDVNRWVP 474 (666) Q Consensus 400 ~~~~~~~~~-----~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~p~~~~~d~~~~~~~~~p 474 (666) +||+++++. .+++..+. .++....-+.+.....|. ...--.- T Consensus 219 ~~ik~~r~~~g~~~~~V~~~~~-------------------------------~d~e~Iin~~n~~~~~~~--~~~~~~~ 265 (437) T protein:vir:10 219 NFIKRMREDEGLGAQLVVADSD-------------------------------ADSEAVINVKNGVILSDK--TVIDKTK 265 (437) T ss_pred HHHHHHHhccCceEEEEeCCCC-------------------------------CCCceEEEeecceeecCc--ceechhh Confidence 887765442 23322110 112222222232222221 0000112 Q ss_pred hHHHHHHHHHhhhhcCCceecccceecceeeeeeeeeecCChhHHhhhhhccceEEEEecCCeEEEEcceecC----CCc Q lcl|Aclame:pro 475 LAADIAGLCARTDAVSQPWMSPAGYNRGQIMNVVKLAIEPRKAHRDRLYQAAINPVIGAGGEGFILMGDKTAT----TVP 550 (666) Q Consensus 475 ~s~~~ag~~a~~d~~~g~~~span~~~~~i~g~~~~~~~~~~~~~~~Ln~~gIn~i~~~~g~G~~~wG~rT~~----~~~ 550 (666) ..+.+||++|..+ +++|+.|+.+. ++..+...+++.|++.|.++|+.++.+..++-+.++|=.|+. ..+ T Consensus 266 ~~a~vAG~~Ag~~----~~~S~t~~~~~---~~~~v~~~~t~~e~~~~i~~G~~vl~~~~~~v~i~~gInTltt~~~~~~ 338 (437) T protein:vir:10 266 ATVWVAAASANAG----VEKSLTYEKYE---DSVDVVGRLSHTETEDALLKGQFVFTARRGRAVVEQDINSHVSFTIEKN 338 (437) T ss_pred HHHHHHHHhccCc----cccCccccccC---CcccccccCCHHHHHHHHhCCcEEEEEeCCeEEEEEccccccccCCCCC Confidence 3577899999875 77799998754 555667789999999999999999987654444557766653 234 Q ss_pred cccceeehhhHHHHHHHHHHHHHH-HHhhC-CCCHHHHHHHHHHHHHHHHHHHhcCCeeeeEEEEcccCCCHHHhhCCEE Q lcl|Aclame:pro 551 SPFDRINVRRLFNMLKKNIGDSSK-YKLFE-NNDNFTRASFRMEVSQYLSTIRSLGGIYDFRVQCDTTNNTPDVIDRNEF 628 (666) Q Consensus 551 ~~~~~i~vrR~~~~i~~~~~~~~~-~~v~e-pn~~~~~~~i~~~i~~~l~~l~~~gal~g~~v~~d~~~n~~~~i~~G~~ 628 (666) .+|++|.++|++|+|.+.+++... +|+++ ||++..|..++..|+.||++|+++|+|.+|.+...+..+.. ....+ T Consensus 339 ~~~~ki~vir~~D~i~~di~~~~~~~yiGk~~N~~~~r~~~~~~i~~yl~~l~~~g~I~~~~~~d~~v~~~~---~~~~v 415 (437) T protein:vir:10 339 QDFRKNRILRTLDDIVNDTRYAFSEYFLGKVSNNEDGRQAFKANRIRYFKDLEARGAIEDFKVEDIEVLRGE---LKESV 415 (437) T ss_pred chhhhhhHHHHHHHHHHHHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCceeEEeecCC---CCCEE Confidence 689999999999999999999876 48888 79999999999999999999999999999988766544322 35688 Q ss_pred EEEEEEEecCCccEEEEEEEEe Q lcl|Aclame:pro 629 VASMFIKPAKSINYIMLNFTAV 650 (666) Q Consensus 629 ~~~i~~~p~~p~e~i~~~~~~~ 650 (666) ++.+.++|+.+||+|.+++..+ T Consensus 416 ~v~~~v~~~dame~iy~ti~v~ 437 (437) T protein:vir:10 416 VVNVKVKPVDSMEKLYMTVTVE 437 (437) T ss_pred EEEEEEEEeeeeeeEEEEEEec Confidence 9999999999999999998877 No 43 >protein:vir:100829 Length: 607 # NCBI annotation: hypothetical protein # Family: family:all:2449 # MgeID: mge:1633 # MgeName: LP65 # Cross-refs: genbank:acc:YP_164738;genbank:gi:56693151;genbank:GeneID:3197462 Probab=100.00 E-value=3.6e-51 Score=297.10 Aligned_cols=554 Identities=13% Similarity=0.121 Sum_probs=298.9 Q ss_pred CceecCceEEEEec-CCccccccCcCceEEEEeccCCCCCcCEEeCCHHHHHHHcCC--cCCCchhHHHHHHHHHhCCCe Q lcl|Aclame:pro 1 MTLLSPGFETKETT-LSTTIVQSATGRAALVGKFQWGPAFQIIQVTNEVELVNKFGQ--PDNNTADYFMSGANFLQYGND 77 (666) Q Consensus 1 ~~~~~PGVyvee~~-~~~~i~~v~tsv~~fvG~~~~Gpv~~p~~i~s~~~~~~~fG~--~~~~~~~~~~~~~~f~ngg~~ 77 (666) --+..|||||++.+ +...++++++++++|||.+++||+++|++++||+|+.+.||+ +.+-.++.|.+..||.|||+. T Consensus 18 ~~~~~pgv~~~~~~~~~~~~~~~~~~~~~~iG~a~~G~~~~~~~~~~~~~a~~~f~~g~l~~a~~~a~~~~~~~~~g~~~ 97 (607) T protein:vir:10 18 FYDSRPHVETNFDDSRLSNTASDSAKNIFMLGSATNGDPTKVYEIRTSQQATKIFGSGDLVDGIKLAFDPTGNSVTNGGT 97 (607) T ss_pred CCccCCceEEEEecCcCcCCCCCCcceEEEEEEeCCCCCceEEEEcchhHHHHhhcCcchHHHHHHhhccccCCccCCce Confidence 23458999999996 567899999999999999999999999999999999999965 344556777777888999999 Q ss_pred EEEEEcccCcccccccccccccceeeecccccccccccceeeeccccccccccccc-cccccceeEEeeccccccccccc Q lcl|Aclame:pro 78 LRVVRVLNKEKAKNATALAGNIEFEITNEGSNYEVGDTIKIKHNRQDIETAGKVTK-VDGDGKVKGVFIPTGKIIAHAKA 156 (666) Q Consensus 78 ~~vvRv~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~t~~~~~~a~~ 156 (666) ||+|||.+...+ +...++...+.. ..+.+++.+++...++. +...+.+. ...+. ...++..-+.... T Consensus 98 ~~~~rv~~~~~a---~~~~~~~~~~~~---~~~~~~~~i~~~l~~~~-~~~~~~~~~~~~d~-~~~~~~n~g~~~~---- 165 (607) T protein:vir:10 98 VYALRVDNAKQA---SLVKDGLTFTSS---IFGTNANQVSVALDNDV-FGVPRITVNYSPDN-YERTYTNIGQMFS---- 165 (607) T ss_pred EEEEeCCCcccc---ceeccccccccc---ccccCCCceEEEEEecC-CCccceeEEeeccc-ceeeeeeccceee---- Confidence 999999544332 222222222222 22334555555442221 11111111 00000 0000000000000 Q ss_pred cceeeecccceeEEEeecccccceeeeeeeee-ccceeeeeeccchhhccccceeee----eecccce----------ee Q lcl|Aclame:pro 157 IGVYPELDGDWTAEFTSSSGNGSAALSVTKIV-TDSGLLLTDLETSRANITNQTFLT----KLQKYDM----------PA 221 (666) Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~-~~~~~~~~~~~~a~~~~~~~~~~~----~~~~~~~----------~~ 221 (666) -.+..........+.....+. +....... .+......+ ....+....+.. ....+.. .. T Consensus 166 -i~y~g~~~~a~~~v~~~~~g~--~~~lt~~~~~~~~~~~~V---~~~~l~~~~~~t~~~l~~din~~~~~~A~~~g~~~ 239 (607) T protein:vir:10 166 -ITYSGKSASAGYTVSHDTDGK--AILLTLGSGDSIDKLTNV---ATFDLTMSKYDTIAKLMQAISATPNFSASVVGSPS 239 (607) T ss_pred -cccCcccccccceeeecCCCc--eeEEEecCCCccceeeee---ecccccccccchHHHHHHHhhcCCceEEEEecccc Confidence 000000000000000000000 00000000 000000000 000000000000 0000001 11 Q ss_pred eeeccccccccceeeeeeccccccccccccccccccccccceeeeeeccCcCcccceeeecccccccceeeecccccccc Q lcl|Aclame:pro 222 VSAIYAGEIGNSLEVEILARSAFKNTAPDLTMYPYGGERTAARNLIPYAPQNDNQYAFIVRRDGVVVESYVLSTLKGDKD 301 (666) Q Consensus 222 ~~A~~~g~~gn~i~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~et~~ls~~~~~~~ 301 (666) +.+.+.+..++.++|.+....- .....+....... ..+.......+. .+. T Consensus 240 i~tky~d~~~~~i~V~~~~~iv----------------~a~~~D~~~~~~~--~~~~~~t~~~~~-~~~----------- 289 (607) T protein:vir:10 240 VNTSYLDEVTSPVDVKTAPAVV----------------TAKIGDAISKLGY--DPYVVVTQTSNN-KPI----------- 289 (607) T ss_pred eeeeccccccceeEEEEeeeee----------------chhhhhhhhcccc--cceEEeeecccc-hhh----------- Confidence 2222222222222222210000 0000000000000 000000000000 000 Q ss_pred cccchhhhHhHhcccCceEEEEeccc-cccccceeeeecCcccccccccccccccccccchhhhhhhhhcchhhcCccEE Q lcl|Aclame:pro 302 VYGNSIYMDDFFGRGSSQYIYATAQG-WVDGFSGIISLAGGVSANEATTGGVGADPFIGAMMQGWGLFAERESIHVNLLI 380 (666) Q Consensus 302 ~~~~~~~~~~~~~~~~s~~i~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ll~ 380 (666) ............-.....+ ..........|.||.++... .++.+... ..+.++.++++ T Consensus 290 -------~~~~~~~~~~~~~~~~~~~~~~~a~~a~~~LtGGtdG~~~-----------~ty~dal~---aLe~~e~~~i~ 348 (607) T protein:vir:10 290 -------VNGVSAGTGSATASVTTAPESFPANFDTAFLTGGSTGDVP-----------VSWADKFN---GAIGNNVYYII 348 (607) T ss_pred -------hhhhhccccceeeeeeccccccccccceeeeeCCCCCCch-----------hhHHHHHH---HHhhcCceEEE Confidence 0000000000000000000 00111112345565554211 12333333 23334566665 Q ss_pred ecccCCCchhHHHHHHHHHHHhhcccc----EEEEEcCCccccccccccCCHHHHHHHHhhccccchhhcccCcceEEEE Q lcl|Aclame:pro 381 AGACAGEGDAFSTVQKHAVSIGDERQD----CLVMVSPPRSTVVNIPVTTAIDNLIAWREGSGNYNENNMNINTTYAVID 456 (666) Q Consensus 381 ~p~~~~~~~~~~~v~~~~~~~~~~~~~----~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~ 456 (666) ++. ...+++.++.+||+++++ +.++++.+ .+.+++++.++.+. +|+.+.+.+ T Consensus 349 ~~t------~d~ai~~~l~a~vkr~~~~g~~~~aVlg~~--------~~~t~~~~~t~a~~----------~N~ervv~V 404 (607) T protein:vir:10 349 PLT------SEENIHAELQAFIDEQHVLGYNYHAFVGGG--------FAEPLEQILSRQVN----------INDSRFGLV 404 (607) T ss_pred ecC------CCHHHHHHHHHHHHHHHhCCCcEEEEecCC--------CCCCHHHHHHHHHh----------hCCCcEEEE Confidence 542 235688888888877655 77776654 35678888877654 678999999 Q ss_pred cCeEEEecCcCCceeEech---HHHHHHHHHhhhhcCCceecccceecceeeeeeeeeecCChhHHhhhhhccceEEEEe Q lcl|Aclame:pro 457 GNYKYQYDKYNDVNRWVPL---AADIAGLCARTDAVSQPWMSPAGYNRGQIMNVVKLAIEPRKAHRDRLYQAAINPVIGA 533 (666) Q Consensus 457 ~p~~~~~d~~~~~~~~~p~---s~~~ag~~a~~d~~~g~~~span~~~~~i~g~~~~~~~~~~~~~~~Ln~~gIn~i~~~ 533 (666) +|+..+.|. +..+.+|+ ++++||++|..+ +.+||.|+.+. ..++...+++.|++.|.++|+.++... T Consensus 405 ~~~~~~~~~--G~~~~~~~~~~Aa~vAGl~Ag~~----~~~SlT~k~i~----~~~v~~~lt~~e~e~ai~~Gv~~l~~~ 474 (607) T protein:vir:10 405 GQSGHVQEG--GESVHVPAYLMAAYVGGLSSSLG----VAVPITNKKLA----LVDLDQNFSGDDLNTLNQNGVIGIEHL 474 (607) T ss_pred ecCeeEeeC--CcceeccHHHHHHHHHHHHhcCc----cccCcccceec----cccccccCCHHHHHHHHhCCeEEEEEc Confidence 998877653 45566665 688999999887 78899998753 346677899999999999999999765 Q ss_pred cC----CeEEEEcceecC--CCccccceeehhhHHHHHHHHHHHHH-HHHhhCCCCHHHHHHHHHHHHHHHHHHHh--cC Q lcl|Aclame:pro 534 GG----EGFILMGDKTAT--TVPSPFDRINVRRLFNMLKKNIGDSS-KYKLFENNDNFTRASFRMEVSQYLSTIRS--LG 604 (666) Q Consensus 534 ~g----~G~~~wG~rT~~--~~~~~~~~i~vrR~~~~i~~~~~~~~-~~~v~epn~~~~~~~i~~~i~~~l~~l~~--~g 604 (666) ++ ++++++.+.|.- .++..|++|+++|++|+|.+.+++.. ++|++|+|++..|.+++..+..||..+|+ .| T Consensus 475 ~~~~~~~~vrIv~~ItT~t~~~~~~~~~i~viRv~D~i~~dir~~~~~~yIGk~nnd~~~~~vk~~i~~~L~~~~l~~~g 554 (607) T protein:vir:10 475 VNRNATGGYYIVQDVSTNTVSSSHVDGSLYLGELTDFLFDNLRFVLRDTYIGSNIRSTSADDIKSTVASYLYSEMNNDDG 554 (607) T ss_pred cCccccceEEEeeeeeeccCCCCcchheeehhhhHHHHHHHHHHHHhhcCCcccCCcchHHHHHHHHHHHHHHHHHHhcC Confidence 43 368888887763 34568999999999999999999876 58999999999999999999999976655 68 Q ss_pred CeeeeEEEEcccCCCHHHhhCCEEEEEEEEEecCCccEEEEEEEEeecchhHHHHHHH Q lcl|Aclame:pro 605 GIYDFRVQCDTTNNTPDVIDRNEFVASMFIKPAKSINYIMLNFTAVATGSDFDEIIGP 662 (666) Q Consensus 605 al~g~~v~~d~~~n~~~~i~~G~~~~~i~~~p~~p~e~i~~~~~~~~~~~~~~e~~~~ 662 (666) +|.+|..+ +-+-...+.+++|++.++|+.++|+|.+++....+..+-++---. T Consensus 555 aI~df~~e-----dv~v~~~~D~v~v~~~v~Pv~~iekIyvtv~v~~~~~~~~~~~~~ 607 (607) T protein:vir:10 555 LIVDFSES-----DIVVTISGTVVYIQFAVAPTQEIKNIVVSGTYSNYSATSEDNTTK 607 (607) T ss_pred ceeCCCcc-----ccEEeeCCCEEEEEEEEEEcccceEEEEEEEEEEEEEeeccCCCC Confidence 99997421 112123556899999999999999999998887765443321111 No 44 >protein:vir:101326 Length: 529 # NCBI annotation: gp22 # Family: family:all:9453 # MgeID: mge:1512 # MgeName: P1 # Cross-refs: genbank:acc:YP_006525;genbank:gi:46401679;genbank:GeneID:2777386 Probab=100.00 E-value=1.3e-45 Score=266.68 Aligned_cols=490 Identities=13% Similarity=0.106 Sum_probs=315.6 Q ss_pred Ccee--------cCceEEEEec--CCc-cccccCcCceEEEEeccCCCCCcCEEeC--CHHHHHHHcCCcCCCchhHHHH Q lcl|Aclame:pro 1 MTLL--------SPGFETKETT--LST-TIVQSATGRAALVGKFQWGPAFQIIQVT--NEVELVNKFGQPDNNTADYFMS 67 (666) Q Consensus 1 ~~~~--------~PGVyvee~~--~~~-~i~~v~tsv~~fvG~~~~Gpv~~p~~i~--s~~~~~~~fG~~~~~~~~~~~~ 67 (666) |.+- ..||.|.+++ .+. .-.|+.+++.|+||.|+||++++|++|+ +|.+|.-.++++....+..+.+ T Consensus 1 ~~~ysi~q~ig~aSGvav~pi~~d~t~~~~~g~g~~v~a~Vgif~RG~i~k~~~Vt~~n~~~~LGep~~~~~ga~~E~~~ 80 (529) T protein:vir:10 1 MSQYSIQQSLGNASGVAVSPINADATLSTGVALNSSLWAGIGVFARGKPFTVLAVTESNYEDVLGEPLKPSSGSQFEPIR 80 (529) T ss_pred CCceehhhhhhhhcccccCCcCcccccchheecCceEEEEEEEeecCCCcceEEEchhHHHHHhccccCCCcchhhhhHh Confidence 5543 5799999985 333 4577899999999999999999999999 7999999999999999999999 Q ss_pred HHHHHhCCCeEEEEEcccCcccccccccccccceeeecccccccccccceeeeccccccccccccccccccceeEEeecc Q lcl|Aclame:pro 68 GANFLQYGNDLRVVRVLNKEKAKNATALAGNIEFEITNEGSNYEVGDTIKIKHNRQDIETAGKVTKVDGDGKVKGVFIPT 147 (666) Q Consensus 68 ~~~f~ngg~~~~vvRv~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t 147 (666) ..|+.-+++.|||||++..+.+...- .+ ..+...+..+.. T Consensus 81 h~~eA~~~~s~yVVRvv~~dak~p~i-------------------------~~---------~~~~~~~~s~~~------ 120 (529) T protein:vir:10 81 HVYEAIQQTSGYVVRAVPDDAKFPII-------------------------MF---------DESGEPAYSALP------ 120 (529) T ss_pred hhhhhhcCCceEEEEEcccccCCceE-------------------------Ee---------cCCccchhhccc------ Confidence 99998888889999986543222100 00 000000000000 Q ss_pred ccccccccccceeeecccceeEEEeecccccceeeeeeeeeccceeeeeeccchhhccccceeeeeecccceeeeeeccc Q lcl|Aclame:pro 148 GKIIAHAKAIGVYPELDGDWTAEFTSSSGNGSAALSVTKIVTDSGLLLTDLETSRANITNQTFLTKLQKYDMPAVSAIYA 227 (666) Q Consensus 148 ~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~A~~~ 227 (666) .. .... T Consensus 121 -----------------~s---------------------------------------------------------~~~~ 126 (529) T protein:vir:10 121 -----------------YG---------------------------------------------------------SEIE 126 (529) T ss_pred -----------------cc---------------------------------------------------------cccc Confidence 00 0000 Q ss_pred cccccceeeeeeccccccccccccccccccccccceeeeeeccCcCcccc----eeee-cccccccceeeeccccccccc Q lcl|Aclame:pro 228 GEIGNSLEVEILARSAFKNTAPDLTMYPYGGERTAARNLIPYAPQNDNQY----AFIV-RRDGVVVESYVLSTLKGDKDV 302 (666) Q Consensus 228 g~~gn~i~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~v-~~~g~~~et~~ls~~~~~~~~ 302 (666) ..||+.+.+.+.+..........+++. ..+......+-| +.++ .-.+..+|+|+.+...++.+. T Consensus 127 l~~G~~~~iy~~Dgd~~~s~~~~l~i~-----------~~~ads~g~e~~~l~~~~~~~~g~~~~let~~~sl~~~a~dd 195 (529) T protein:vir:10 127 LDSGEAFAIYVDDGDPCISPTRELTIE-----------TATADSAGNERFLLKLTQTTSLGVVTTLETHTVSLAEEAKDD 195 (529) T ss_pred ccccceEEEEEecCcCccCCceEEEEE-----------eeccccCCCccceeeEEEEeecCCceEEEEEEeeeeechhhh Confidence 111111111111111000000000000 000000011111 1111 235677899999999999999 Q ss_pred ccchhhhHhHhcccCceEEEEeccccccccce----eeeecCcccccccccccccccccccchhhhhhhhhcchhhcCcc Q lcl|Aclame:pro 303 YGNSIYMDDFFGRGSSQYIYATAQGWVDGFSG----IISLAGGVSANEATTGGVGADPFIGAMMQGWGLFAERESIHVNL 378 (666) Q Consensus 303 ~~~~~~~~~~~~~~~s~~i~~~~~~~~~~~~~----~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l 378 (666) .+...++..++.+....+......+....... -.++.+|+++..... ...++..+...+.....+.-.+ T Consensus 196 ~G~~~yl~svle~~s~~l~ai~~~e~~~t~~~~t~~d~~f~~GtdG~~~~i-------~s~~y~~A~~~L~n~p~d~~~i 268 (529) T protein:vir:10 196 MGRLCYLPTALEARSKYLRAVVNEELISTAKVTNKKSLAFTGGTNGDQSKI-------STAAYLRAVKVLNNAPYMYTAV 268 (529) T ss_pred cCCccchhHHHhhccCceeeeeeeccccccchhhhhhhhccCCcccccccc-------chHHHHHHHHHhcCCcceeeee Confidence 99999999988775554444333322222111 123444444322110 1223444444443333333333 Q ss_pred EEecccCCCchhHHHHHHHHHHHhhcc-ccEEEEEcCCccccccccccCCHHHHHHHHhhccccchhhcccCcceEEEEc Q lcl|Aclame:pro 379 LIAGACAGEGDAFSTVQKHAVSIGDER-QDCLVMVSPPRSTVVNIPVTTAIDNLIAWREGSGNYNENNMNINTTYAVIDG 457 (666) Q Consensus 379 l~~p~~~~~~~~~~~v~~~~~~~~~~~-~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~ 457 (666) |..+ +-..++..+|+.+|+++ +++| .|.++..++.++++|++..+....+..+ . +.+|| T Consensus 269 l~~g------~y~~a~I~~L~~ic~~~~~d~f----------~DV~~~LT~~aA~~~~e~~gl~~~~~~~--~--s~y~~ 328 (529) T protein:vir:10 269 LGLG------CYDNAAITALGKICADRLIDGF----------FDVKPTLTYAEALPAVEDTGLLGTDYVS--C--SVYHY 328 (529) T ss_pred eccC------CccHHHHHHHHHHHhhhhhcEE----------EcCCCCcCHHHHHHHHHhcCccccCcee--e--EEEEc Confidence 3333 33467899999999654 4443 2456789999999999998765544322 1 34788 Q ss_pred CeEEEecCcCCceeEechHHH--HHHH--HHhhhhcCCceecccceecceeeee-eeeeecCChhHHhhhhhccceEEEE Q lcl|Aclame:pro 458 NYKYQYDKYNDVNRWVPLAAD--IAGL--CARTDAVSQPWMSPAGYNRGQIMNV-VKLAIEPRKAHRDRLYQAAINPVIG 532 (666) Q Consensus 458 p~~~~~d~~~~~~~~~p~s~~--~ag~--~a~~d~~~g~~~span~~~~~i~g~-~~~~~~~~~~~~~~Ln~~gIn~i~~ 532 (666) ||. ..||.++....+++||. +|.. .++.-...|+|++|||+.++.|... +.+-+..++.|...|-.++||++.. T Consensus 329 P~~-~~D~~tg~k~~~GlsG~A~~akargv~~na~v~g~hY~pAGe~r~~inr~~I~~ly~~d~~e~~~lv~~riNPV~~ 407 (529) T protein:vir:10 329 PFS-CKDKWTQSRVVFGLSGVAYAAKARGVKKNSDVGGWHYSPAGEERAVIARASIQPLYPEDTPDEEAMVKGRLNKVSV 407 (529) T ss_pred cee-eccccccCceeeCCCcceeeccccceeecccccccccccCCCccceeecccceeccCCCccCHHHHHhhccCeeee Confidence 886 89999999999999984 3321 1233333345999999987644321 2334666778888899999999977 Q ss_pred ecCCeEEEEcceecCCCccccceeehhhHHHHHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHhcCCeee---- Q lcl|Aclame:pro 533 AGGEGFILMGDKTATTVPSPFDRINVRRLFNMLKKNIGDSSKYKLFENNDNFTRASFRMEVSQYLSTIRSLGGIYD---- 608 (666) Q Consensus 533 ~~g~G~~~wG~rT~~~~~~~~~~i~vrR~~~~i~~~~~~~~~~~v~epn~~~~~~~i~~~i~~~l~~l~~~gal~g---- 608 (666) -.++++.+-.+-|+...++.||++|+++||++|++.+.+..+|.+||||+..+|. +++.+..+|+.+|+.|+|++ T Consensus 408 ~~~g~~~idDsLt~~~knny~R~~hv~~lmn~I~~~~~k~a~~~~~~Pd~it~~g-l~~~l~~~L~r~~asgalv~prdp 486 (529) T protein:vir:10 408 GTSGQMIIDDALTCCTQDNYLHFQHVPSLMNAISRFFVQLARQMKHSPDGITAAG-LTKGMTKLLDRFVASGALVAPRDP 486 (529) T ss_pred eccCcceeeeeeceeeeCCchhhhhHHHHHHHHHHHHHHHHHHHhhCCChHHHHH-HHHhHHHHHHHHHhcCceecccCc Confidence 6666666555555555678999999999999999999999999999999999997 99999999999999999975 Q ss_pred -------eEEEEcccCCCHHHhhCCEEEEEEEEEecCCccEEEEEEEEee Q lcl|Aclame:pro 609 -------FRVQCDTTNNTPDVIDRNEFVASMFIKPAKSINYIMLNFTAVA 651 (666) Q Consensus 609 -------~~v~~d~~~n~~~~i~~G~~~~~i~~~p~~p~e~i~~~~~~~~ 651 (666) |++++ +|. +.+++.+++.++|...++.|.+.=...+ T Consensus 487 ~~~G~epy~~~V-----~q~--d~D~~~v~~~~~ptGv~Rri~~~p~l~~ 529 (529) T protein:vir:10 487 DADGTEPYVLKV-----TQA--EFDKWEVVWACCPTGVARRIQGVPLLIK 529 (529) T ss_pred cCCCCCceEEEE-----eec--ccCeEEEEEEeecCCceeeEEeeeeecC Confidence 77766 344 4489999999999999999876533333 No 45 >protein:vir:105470 Length: 451 # NCBI annotation: putative phage sheath tail protein # Family: family:all:632 # MgeID: mge:1502 # MgeName: KC5a # Cross-refs: genbank:acc:YP_529880;genbank:gi:90592620;genbank:GeneID:3974534 Probab=100.00 E-value=4.5e-42 Score=247.24 Aligned_cols=425 Identities=16% Similarity=0.127 Sum_probs=270.4 Q ss_pred CceecCceEEEEec-CCccccccCcCceEEEEec-cCCCCCcCEEeCCHHHHHHHcCCcCCCchhHHHHHHHHHhCCCeE Q lcl|Aclame:pro 1 MTLLSPGFETKETT-LSTTIVQSATGRAALVGKF-QWGPAFQIIQVTNEVELVNKFGQPDNNTADYFMSGANFLQYGNDL 78 (666) Q Consensus 1 ~~~~~PGVyvee~~-~~~~i~~v~tsv~~fvG~~-~~Gpv~~p~~i~s~~~~~~~fG~~~~~~~~~~~~~~~f~ngg~~~ 78 (666) +.=.-|||||||++ +.+++.+++|++++|+|.+ .||| ++|+.|.|++||++.||... .+..+....+|++||+.+ T Consensus 9 ~~K~~PGvYi~~~~~~~~~~~~~~~~~~~~i~~~~~~g~-~~~v~i~~~~d~~~~fG~~~--~~~~~~~~~~~~~g~~~v 85 (451) T protein:vir:10 9 QDKRRPGTYINVVGNGQREAASSLGRVLLIRDKGLGWGK-NGVIEVEANSDFTKKLGTTL--DDPSLTALKETLKGASKV 85 (451) T ss_pred ceeecCceEEEEeccCcceeeccCCcEEEEEeeecCCCC-cccEEeecHHHHHHHcCCcc--cchhHHHHHHHhcCCcEE Confidence 55569999999996 6789999999999999965 5677 77999999999999999644 333444445566899999 Q ss_pred EEEEcccCcccccccccccccceeeecccccccccccceeeeccccccccccccccccccceeEEeeccccccccccccc Q lcl|Aclame:pro 79 RVVRVLNKEKAKNATALAGNIEFEITNEGSNYEVGDTIKIKHNRQDIETAGKVTKVDGDGKVKGVFIPTGKIIAHAKAIG 158 (666) Q Consensus 79 ~vvRv~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~a~~~~ 158 (666) |+.|+.+++.++. +.. T Consensus 86 ~~yrl~~g~~a~~-t~~--------------------------------------------------------------- 101 (451) T protein:vir:10 86 LVLNPNEGTAATL-TKE--------------------------------------------------------------- 101 (451) T ss_pred EEEEcCCCceEEE-Eee--------------------------------------------------------------- Confidence 9999854321100 000 Q ss_pred eeeecccceeEEEeecccccceeeeeeeeeccceeeeeeccchhhccccceeeeeecccceeeeeeccccccccceeeee Q lcl|Aclame:pro 159 VYPELDGDWTAEFTSSSGNGSAALSVTKIVTDSGLLLTDLETSRANITNQTFLTKLQKYDMPAVSAIYAGEIGNSLEVEI 238 (666) Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~A~~~g~~gn~i~v~v 238 (666) .....+.|.++|.|||+++|.+ T Consensus 102 ----------------------------------------------------------~~~~~~~Aky~G~~Gn~i~v~v 123 (451) T protein:vir:10 102 ----------------------------------------------------------GLPWTVTANYPGEKGNQITVSV 123 (451) T ss_pred ----------------------------------------------------------cCceEEEEeeCCcCCceEEEEE Confidence 0001134788999999999887 Q ss_pred eccccccccccccccccccccccceeeeeeccCcCcccceeeecccccccceeeecccccccccccchhhhHhHhcccCc Q lcl|Aclame:pro 239 LARSAFKNTAPDLTMYPYGGERTAARNLIPYAPQNDNQYAFIVRRDGVVVESYVLSTLKGDKDVYGNSIYMDDFFGRGSS 318 (666) Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~et~~ls~~~~~~~~~~~~~~~~~~~~~~~s 318 (666) ..... ....+.+.+..++..++....+... .. +...+ T Consensus 124 ~~~~~-----------------------------d~~~~~v~t~~g~~~vd~qtv~~~~-----------~~---el~~n 160 (451) T protein:vir:10 124 EVSPA-----------------------------DQNAATVSTIFGTKLVDEQSIKFNE-----------LD---KFKGN 160 (451) T ss_pred ecccC-----------------------------CcCceEEEEEECCeEEEEEEeeccc-----------hh---hccCC Confidence 53211 1122333333333333332221100 00 01112 Q ss_pred eEEEEec-cccccccceeeeecCcccccccccccccccccccchhhhhhhhhcchhhcCccEEecccCCCchhHHHHHHH Q lcl|Aclame:pro 319 QYIYATA-QGWVDGFSGIISLAGGVSANEATTGGVGADPFIGAMMQGWGLFAERESIHVNLLIAGACAGEGDAFSTVQKH 397 (666) Q Consensus 319 ~~i~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ll~~p~~~~~~~~~~~v~~~ 397 (666) .++.... ............+.++.++...... ..+ ....+...|...++.|++|+...+ ..++.. T Consensus 161 d~V~a~~~~~g~~~~~~~~~l~~~~~gg~~~~~-------~~~---~~~~l~~~e~~~~n~l~~~~~~~~----~~i~~~ 226 (451) T protein:vir:10 161 DYITAKVVEEGSSKPVAFTNVSGTLTGGTTTES-------NKV---ESLLNDALENEEYAVVTTAGFEPS----SNMNKL 226 (451) T ss_pred ceEEEEecccccccceeeeecccccccccccCC-------ccc---hHHHHHHhccceeeEEEEccCCCc----hHHHHH Confidence 2332321 1112222223333333222111110 111 122344556677899999876432 446667 Q ss_pred HHHHhhcccc-----EEEEEcCCccccccccccCCHHHHHHHHhhccccchhhcccCcceEEEEcCeEEEecCcCCceeE Q lcl|Aclame:pro 398 AVSIGDERQD-----CLVMVSPPRSTVVNIPVTTAIDNLIAWREGSGNYNENNMNINTTYAVIDGNYKYQYDKYNDVNRW 472 (666) Q Consensus 398 ~~~~~~~~~~-----~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~p~~~~~d~~~~~~~~ 472 (666) +.++|+++|+ +.+++..+... . ++.....-+.+.....| .+. T Consensus 227 ~~a~ik~~r~~~g~~~~aVl~~~~~~--------~--------------------~d~egiinv~n~~~~~d-----g~~ 273 (451) T protein:vir:10 227 VVEAVKRLRENEGRKVRGVIPTDADT--------T--------------------YNYEGISTVVNGYTLSD-----GTN 273 (451) T ss_pred HHHHHHHHHHhcCCeEEEEecCccCC--------C--------------------CCCcceEEeecceEecC-----cee Confidence 7777776543 34555322110 0 12223333333332222 122 Q ss_pred ech---HHHHHHHHHhhhhcCCceecccceecceeeeeeeeeecCChhHHhhhhhccceEEEEecCCeEEE-EcceecC- Q lcl|Aclame:pro 473 VPL---AADIAGLCARTDAVSQPWMSPAGYNRGQIMNVVKLAIEPRKAHRDRLYQAAINPVIGAGGEGFIL-MGDKTAT- 547 (666) Q Consensus 473 ~p~---s~~~ag~~a~~d~~~g~~~span~~~~~i~g~~~~~~~~~~~~~~~Ln~~gIn~i~~~~g~G~~~-wG~rT~~- 547 (666) +++ .+.+||++|.++ +.+|+.|+.+ .++......+++.|++.+.++|..+++...++++++ +|=.|+. T Consensus 274 ~~~~~~~~~vAG~~Ag~~----~~~S~T~~~~---~~~~~v~~~~t~~e~~~~i~~G~lvl~~~~g~~v~i~~~INTltt 346 (451) T protein:vir:10 274 VDVKDATGYFAGISASAD----VATSLTYFEV---EDAVSAYPKFDNEKTIKALDAGQIVFTTRPGQRVVIEQDINSLHK 346 (451) T ss_pred echhhhHHHHHHHHcccc----cccCccceec---CCceeeeeeCCHHHHHHHHhCCeEEEEEEcCCeEEEEEcccccee Confidence 333 478899999876 6679999864 456667788999999999999999887667777765 7766653 Q ss_pred ---CCccccceeehhhHHHHHHHHHHHHHHH-HhhC-CCCHHHHHHHHHHHHHHHHHHHhcCCeeeeEEEEcccCCCHHH Q lcl|Aclame:pro 548 ---TVPSPFDRINVRRLFNMLKKNIGDSSKY-KLFE-NNDNFTRASFRMEVSQYLSTIRSLGGIYDFRVQCDTTNNTPDV 622 (666) Q Consensus 548 ---~~~~~~~~i~vrR~~~~i~~~~~~~~~~-~v~e-pn~~~~~~~i~~~i~~~l~~l~~~gal~g~~v~~d~~~n~~~~ 622 (666) ..+..|+.|.++|++|+|.+.+++.... |+++ |||...|..++..|+.||++|+++|+|..|... |.+-. .- T Consensus 347 ~~~~k~~~~~ki~vir~~D~i~~di~~~~~~~yiGk~~N~~~gr~~~~~~i~~yl~~l~~~g~i~~~~~~-d~~v~--~~ 423 (451) T protein:vir:10 347 FTAEKPQAFSKNRVIRTLDEIATNTENTFERTYLGNVGNNAAGRDLFKADRIAYLTSLQNRNMIQSFANT-DITVE--AG 423 (451) T ss_pred cCCCCCcchhhhhHHHHHHHHHHHHHHHhhhccceecCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCcc-ceEEe--ec Confidence 2346899999999999999999998864 8886 699999999999999999999999999998632 21111 11 Q ss_pred hhCCEEEEEEEEEecCCccEEEEEEEEe Q lcl|Aclame:pro 623 IDRNEFVASMFIKPAKSINYIMLNFTAV 650 (666) Q Consensus 623 i~~G~~~~~i~~~p~~p~e~i~~~~~~~ 650 (666) -....+++.+.++|+..||+|.+++.-+ T Consensus 424 ~~~~~v~v~~~v~pvdame~iy~t~~v~ 451 (451) T protein:vir:10 424 NDMDSIVVNLAVTPVDAMEKLYMTMVVR 451 (451) T ss_pred CCCCEEEEEEEEEEEeeeeeEEEEEEEc Confidence 2367789999999999999999998877 No 46 >protein:vir:7653 Length: 581 # NCBI annotation: gp124 # Family: family:all:1196 # MgeID: mge:148 # MgeName: Bxz1 # Cross-refs: genbank:acc:NP_818197;genbank:gi:29566631;genbank:GeneID:1259809 Probab=100.00 E-value=5.6e-36 Score=213.87 Aligned_cols=529 Identities=14% Similarity=0.067 Sum_probs=218.5 Q ss_pred HHHHHHhCC-CeEEEEEcccCcccccccccccc---cceeeeccc--ccccccccceeeecccccccccc--c--ccccc Q lcl|Aclame:pro 67 SGANFLQYG-NDLRVVRVLNKEKAKNATALAGN---IEFEITNEG--SNYEVGDTIKIKHNRQDIETAGK--V--TKVDG 136 (666) Q Consensus 67 ~~~~f~ngg-~~~~vvRv~~~~~~~~a~~~~~~---~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~--~--~~~~~ 136 (666) ...-|..+- .-.|-.++.. ...+. +.......+ .++. +....++.........-. + +.... T Consensus 1 ~~~~~~~~~~~~~~t~~~~~--------~~~g~~~~~~~~~~i~g~~~g~~-g~~~s~r~~p~~~~~~evq~v~~~~~~t 71 (581) T protein:vir:76 1 MAIDFSQYQTPGVYTEAVGA--------PQLGIRSSVPTAVAIFGTAVGYQ-TYRESIRINPDTGETITTQILALVGEPT 71 (581) T ss_pred Ccccccccccchhhhhhccc--------cccCcceeeeeeeeecccccccc-cccceeeecCCCCCCCceEEEEEeecCC Confidence 000000000 0000000000 00000 000000000 0000 000111110000000000 0 00000 Q ss_pred ccceeEEee--cccccccccccc------ceeeecccceeEEEeecccccceeeeeeeeeccceeeeeeccchhhccccc Q lcl|Aclame:pro 137 DGKVKGVFI--PTGKIIAHAKAI------GVYPELDGDWTAEFTSSSGNGSAALSVTKIVTDSGLLLTDLETSRANITNQ 208 (666) Q Consensus 137 ~~~~~~~~~--~t~~~~~~a~~~------~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~a~~~~~~~ 208 (666) .++++..+- .+......+... ..+....... ..++..... ...+. +..+.+..... ...+.+. T Consensus 72 ~G~ftLt~~g~tT~~I~~~asa~~v~~AL~~L~~i~~~~-v~vtg~~~~---~~~V~-F~g~~~~~~~~----~~~ltg~ 142 (581) T protein:vir:76 72 GGSFKLSLAGEPTGNIPFNATQGQVQSALRALPNVEDDE-VTVLGDPGG---PWTVT-FTKAVAALTKD----VTGLTGG 142 (581) T ss_pred cceEEEEeCceeccccccCCCHHHHHHHHhhccCCCCce-EEEEcCCCc---eEEEE-EcCCccceeEe----eeeeecC Confidence 011111110 011000000000 0000000000 000000000 00000 00000000000 0000000 Q ss_pred eeeeeecccceeeeeeccccccccceeeee------------eccccccccccccccccccccccceeeeeeccCcCccc Q lcl|Aclame:pro 209 TFLTKLQKYDMPAVSAIYAGEIGNSLEVEI------------LARSAFKNTAPDLTMYPYGGERTAARNLIPYAPQNDNQ 276 (666) Q Consensus 209 ~~~~~~~~~~~~~~~A~~~g~~gn~i~v~v------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (666) . .....+.-...|..+.+.++.. +.............. ...+..........++. T Consensus 143 ~-------~~~~~V~~~~~G~~~~~~~l~~~g~~~~~~~~~~s~~~~~~~l~~~~~~------~~~~~~~~~~~~~~~~~ 209 (581) T protein:vir:76 143 D-------NPDLNIASEQTGVPAMNRALAKKGIKTDTIRVVNPNSGQVYVLGTDYVV------TRVNAGEDGEANTRDDL 209 (581) T ss_pred C-------cceeEEEEEecCcCCcCceeeeccccccccceeecCCcceeeecccccc------eeeccCcccceeeeeee Confidence 0 0000000000000000000000 000000000000000 00000000000111111 Q ss_pred ceeeecccccccceee---ecccccc-----cccccchhhhHhH----hcccC---ceEEEEeccccccccceeeeecCc Q lcl|Aclame:pro 277 YAFIVRRDGVVVESYV---LSTLKGD-----KDVYGNSIYMDDF----FGRGS---SQYIYATAQGWVDGFSGIISLAGG 341 (666) Q Consensus 277 ~~~~v~~~g~~~et~~---ls~~~~~-----~~~~~~~~~~~~~----~~~~~---s~~i~~~~~~~~~~~~~~~~~~~g 341 (666) ++.....+|....... ++..... ...+......... .+..+ +.+............ ...|.++ T Consensus 210 ~t~~~~~~g~~~~~~~i~~~~~~~~D~~~~~~v~~~~~~~~~~~~~~~~~~~g~~~~e~~~~~~~~~t~~~--~~~l~~g 287 (581) T protein:vir:76 210 YTIQRVVDGGHIDPGDIVQLSYRYTDPNYHEVIRFTDPDDIQDFYGPAFDEAGNVQSEITLCAQLAITNGA--STILACA 287 (581) T ss_pred eeeEeecccccccceeEEEEEEEeecCCccceEEEecccccccceeeehhhcCccccchhhhhheeecccc--ceEEEee Confidence 2222222222111111 1100000 0000000000000 00000 000000000000000 0112222 Q ss_pred ccccccccccccccccccchhhhhhhhhcchhhcCccEEecccCCCchhHHHHHHHHHHHhhccc----cEEEEEcCCcc Q lcl|Aclame:pro 342 VSANEATTGGVGADPFIGAMMQGWGLFAERESIHVNLLIAGACAGEGDAFSTVQKHAVSIGDERQ----DCLVMVSPPRS 417 (666) Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ll~~p~~~~~~~~~~~v~~~~~~~~~~~~----~~~~~~d~~~~ 417 (666) .++.. .....+++..+. ...+..+.+.+++|+. ....++..+.+||++++ .+.++++.+. T Consensus 288 vd~~g-------~tvt~~dy~~aL---~ale~~~~~~ivvp~t-----~~~~i~a~l~ahv~~~s~~~~~~ra~igv~g- 351 (581) T protein:vir:76 288 VDPEG-------DTVTMGDYQNAL---NKFRDEDEIAIIVAGT-----GAQPIQALVQQHVSAQSNNKYERRAILGMDG- 351 (581) T ss_pred ecCCC-------CccchHHHHHHH---HHHhcCCeEEEEEecC-----CChHHHHHHHHHHHHHHhccCCceEEEEeeC- Confidence 22110 011122333333 3333345566667764 23456777777775542 2333332211 Q ss_pred ccccccccCCHHHHHHHHhhccccchhhcccCcceEEEEcCeEEEecCcCCceeEechHHHHHHHHHhhhhcCCceeccc Q lcl|Aclame:pro 418 TVVNIPVTTAIDNLIAWREGSGNYNENNMNINTTYAVIDGNYKYQYDKYNDVNRWVPLAADIAGLCARTDAVSQPWMSPA 497 (666) Q Consensus 418 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~p~~~~~d~~~~~~~~~p~s~~~ag~~a~~d~~~g~~~spa 497 (666) .+.....+++++. ...+|++|.+++|||.++.+..........|..++|+.+|.+..+.++++||. T Consensus 352 ----~~~~~~~~~~~~~----------a~~~ns~Rvvlv~p~~~~~~g~~~~~~~~lp~~~~AA~vAG~~a~~~~~~slT 417 (581) T protein:vir:76 352 ----SVTPVPSATRIAN----------AQSIKDQRVALISPSSFVYYAPELNREVVLGGQFMAAAVAGKSVSAIAAMPLT 417 (581) T ss_pred ----CCCCchHHHHHHh----------hcccCCCcEEEEEcCceEeccccCCcceecchhhhhhhHHhhhhccccccCcc Confidence 1112223333322 23578999999999999988765544444455566666677777777999999 Q ss_pred ceecceeeeeeeeeecCChhHHhhhhhccceEEEEecCCeEEE-EcceecCCCccccceeehhhHHHHHHHHHHHHHH-- Q lcl|Aclame:pro 498 GYNRGQIMNVVKLAIEPRKAHRDRLYQAAINPVIGAGGEGFIL-MGDKTATTVPSPFDRINVRRLFNMLKKNIGDSSK-- 574 (666) Q Consensus 498 n~~~~~i~g~~~~~~~~~~~~~~~Ln~~gIn~i~~~~g~G~~~-wG~rT~~~~~~~~~~i~vrR~~~~i~~~~~~~~~-- 574 (666) |+.+. |+..+...+++.|++.|+++|+++++.++++++++ ||-+|+.++ .+|++|++||+++++++.+++.++ T Consensus 418 ~~~i~---g~~~~~~~~s~~e~e~ll~~Gv~~l~~~~~~~v~Iv~gItT~~s~-~~~k~i~viR~~D~v~~~vr~~~~~~ 493 (581) T protein:vir:76 418 RKVIR---GFSGPAEVQRDGEKSRESSEGLMVIEKTPRNLVHVRHGVTTDPTS-LHTREWNIIGQQDVMVYRIRDYLDAD 493 (581) T ss_pred ccccc---ccccccccCCHHHHHHHHhCCeEEEEEecCCeEEEEEeeecCCCC-CccceeeehhhhHHHHHHHHHHHhhh Confidence 99755 56677888999999999999999999999999985 666776655 589999999999999999999986 Q ss_pred HHhhCCCCHHHHHHHHHHHHHHHHHHHhcCCeeeeEEEEcccCCCHHHhhCCEEEEEEEEEecCCccEEEEEEEEeecch Q lcl|Aclame:pro 575 YKLFENNDNFTRASFRMEVSQYLSTIRSLGGIYDFRVQCDTTNNTPDVIDRNEFVASMFIKPAKSINYIMLNFTAVATGS 654 (666) Q Consensus 575 ~~v~epn~~~~~~~i~~~i~~~l~~l~~~gal~g~~v~~d~~~n~~~~i~~G~~~~~i~~~p~~p~e~i~~~~~~~~~~~ 654 (666) .|++|||++.+|.+|+..+..||..||++|+|.||... +.++.+++.+++++++.++|++|+|||.+++......- T Consensus 494 ~fiG~~n~~~~r~~ik~~i~~~L~~l~~~g~I~g~~~~----~~~~~~~~~d~v~V~i~v~Pv~~ie~I~vt~~~~p~~~ 569 (581) T protein:vir:76 494 GLIGMPIYDTTIVQVKASAEAALVWLVDNNIIRGYRNL----KARQIERQPDVIEVRYEWRPAYPLNYIVVRYSIAPETG 569 (581) T ss_pred cCCCcccChHHHHHHHHHHHHHHHHHHhcCcccCcccc----eeeEEecCCCEEEEEEEEEecccceEEEEEEEEeeCCC Confidence 47889999999999999999999999999999998632 34566678899999999999999999999988776443 Q ss_pred hHHHHHHHHhcC Q lcl|Aclame:pro 655 DFDEIIGPVNQA 666 (666) Q Consensus 655 ~~~e~~~~~~~~ 666 (666) .+.--+..---= T Consensus 570 ~~~~~~~~~~~~ 581 (581) T protein:vir:76 570 DITSTIEGTTSF 581 (581) T ss_pred ceEEEEeccccC Confidence 222111100000 No 47 >protein:vir:107310 Length: 581 # NCBI annotation: gp123 # Family: family:all:1196 # MgeID: mge:1550 # MgeName: Catera # Cross-refs: genbank:acc:YP_656131;genbank:gi:109393333;genbank:GeneID:4156791 Probab=100.00 E-value=3e-36 Score=215.31 Aligned_cols=535 Identities=13% Similarity=0.056 Sum_probs=229.1 Q ss_pred cCEEeCC---HHHHHHHcCCcCCCc--hhHHHH--HHHHHh-CCCeEEEEEcccCcccccccccccccceeeeccccccc Q lcl|Aclame:pro 40 QIIQVTN---EVELVNKFGQPDNNT--ADYFMS--GANFLQ-YGNDLRVVRVLNKEKAKNATALAGNIEFEITNEGSNYE 111 (666) Q Consensus 40 ~p~~i~s---~~~~~~~fG~~~~~~--~~~~~~--~~~f~n-gg~~~~vvRv~~~~~~~~a~~~~~~~~~~~~~~~~~~~ 111 (666) +.+.+.- -.||...|+.+.... ..++++ .+.+-- .|-+|..-.+..++...... ..+. .+.+ T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~g~~~g~~g~~~s~~~~p~~~~~~e~q------~v~~--~~~~-- 70 (581) T protein:vir:10 1 MAIDFSQYQTPGVYTEAVGAPQLGIRSSVPTAVAIFGTAVGYQTYRESIRINPDTGETITTQ------ILAL--VGEP-- 70 (581) T ss_pred CeeeeccccccchhhhhccccccceeeeeccccccccccccccccccccccCCCCCCccceE------EEEE--EecC-- Confidence 4444322 234455555443221 111111 111220 12233222221111110000 0000 0000 Q ss_pred ccccceeeeccccccccccccccccccceeEEeecccccccccc-cccee--------eecccceeEEEeecccccceee Q lcl|Aclame:pro 112 VGDTIKIKHNRQDIETAGKVTKVDGDGKVKGVFIPTGKIIAHAK-AIGVY--------PELDGDWTAEFTSSSGNGSAAL 182 (666) Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~a~-~~~~~--------~~~~~~~~~~~~~~~~~~~~a~ 182 (666) .+-...+.+.+.. + ....+.+++..+..+. .+... ......+..++....... .. T Consensus 71 t~GtFtLsf~G~t-------T-------~~I~~~asa~~v~~AL~~L~~i~~~~v~v~g~~g~~~~VtF~g~~~~l--~~ 134 (581) T protein:vir:10 71 TGGSFKLSLAGEP-------T-------GNIPFNATQGQVQSALRALPNVEDDEVTVLGDPGGPWTVTFTKAVAAL--TK 134 (581) T ss_pred CCceEEEEeCcee-------c-------ccccccCCHHHHHHHHhccCCCCcceEEEECCCCceEEEEEcCCccce--ee Confidence 0000111111100 0 0000000000000000 00000 000001111111000000 00 Q ss_pred eeeeeeccceeeeeeccchhhccccceeeeeecccceeeeee--ccccccccceeeeeeccccccccccc-ccccccccc Q lcl|Aclame:pro 183 SVTKIVTDSGLLLTDLETSRANITNQTFLTKLQKYDMPAVSA--IYAGEIGNSLEVEILARSAFKNTAPD-LTMYPYGGE 259 (666) Q Consensus 183 ~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~A--~~~g~~gn~i~v~v~~~~~~~~~~~~-~~~~~~~~~ 259 (666) .........+..+....... +.....+ ...+--.....++-.........+.. .....+.. T Consensus 135 ~~~~lt~g~~~~vtV~~~~~---------------g~~~~~~~~s~~gi~~~~~~l~~~~~~~~~~~gsd~~~~~~~~~- 198 (581) T protein:vir:10 135 DVTGLTGGDDPDLNIASEQT---------------GVPAMNRALAKKGIKTDTIRVVNPNSGQVYVLGTDYVVTRVNAG- 198 (581) T ss_pred eeceecCCCceeEEEecccc---------------CcccccccccccccccccccccccccCcceeccccceeeecccC- Confidence 00000000000000000000 0000000 00000000000000000000000000 00000000 Q ss_pred ccceeeeeeccCcCcccceeeecccccccceeee---ccccccc-----ccccchhhhHhH----hcccC---ceEEEEe Q lcl|Aclame:pro 260 RTAARNLIPYAPQNDNQYAFIVRRDGVVVESYVL---STLKGDK-----DVYGNSIYMDDF----FGRGS---SQYIYAT 324 (666) Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~v~~~g~~~et~~l---s~~~~~~-----~~~~~~~~~~~~----~~~~~---s~~i~~~ 324 (666) ........++.++++....|.+.++..+ +...... ............ .+..+ +.+.... T Consensus 199 ------~~~~~~~~~D~~t~~~~~~g~~~~~~~v~~~~~~~~d~~~~~~v~~~~~~~~~~~~~~~~~~~g~~~~~~t~~~ 272 (581) T protein:vir:10 199 ------EDGEANTRDDLYTIQRVVDGGHIDPGDIVQLSYRYTDPNYHEVIRFTDPDDIQDFYGPAFDEAGNVQSEITLCA 272 (581) T ss_pred ------ccccccccccceeeeeeecccccccceEEEEEEEeecCCcceeEEeecCcchhhhhhhhhhccCccccchhhhh Confidence 0000011122233333333333332211 1100000 000000000111 01000 0000000 Q ss_pred ccccccccceeeeecCcccccccccccccccccccchhhhhhhhhcchhhcCccEEecccCCCchhHHHHHHHHHHHhhc Q lcl|Aclame:pro 325 AQGWVDGFSGIISLAGGVSANEATTGGVGADPFIGAMMQGWGLFAERESIHVNLLIAGACAGEGDAFSTVQKHAVSIGDE 404 (666) Q Consensus 325 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ll~~p~~~~~~~~~~~v~~~~~~~~~~ 404 (666) ........ ...|.++.++.. .....+++..+. ...+..+.+.+++|+. ....++.++.+||++ T Consensus 273 ~~~~tn~~--~~~l~~gvd~~g-------~tvt~~dy~~Al---~ale~~~~~~ivv~~t-----~~~~v~a~l~ahv~~ 335 (581) T protein:vir:10 273 QLAITNGA--STILACAVDPEG-------DTVTMGDYQNAL---NKFRDEDEIAIIVAGT-----GAQPIQALVQQHVSA 335 (581) T ss_pred eeeeeccc--ceeEEeeccCCC-------CccchHHHHHHH---HHHhcCCceEEEEeCC-----CCHHHHHHHHHHHHH Confidence 00000000 011122221111 011222343333 3333445566667763 335677778888866 Q ss_pred cc----cEEEEEcCCccccccccccCCHHHHHHHHhhccccchhhcccCcceEEEEcCeEEEecCcCC-ceeEech---H Q lcl|Aclame:pro 405 RQ----DCLVMVSPPRSTVVNIPVTTAIDNLIAWREGSGNYNENNMNINTTYAVIDGNYKYQYDKYND-VNRWVPL---A 476 (666) Q Consensus 405 ~~----~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~p~~~~~d~~~~-~~~~~p~---s 476 (666) +. .+.++++... .+.....+++++. +.++|++|.+++||+.++.+...+ ....+|+ + T Consensus 336 ~s~~~~~~ravigV~g-----~~~~~~~~~~~~~----------a~~~n~~Rvvlv~p~~~~~~g~~~~~~v~lp~y~~A 400 (581) T protein:vir:10 336 QSNNKYERRAILGMDG-----SVTPVPSATRIAN----------AQSIKDQRVALISPSSFVYYAPELNREVVLGGQFMA 400 (581) T ss_pred HHhccCCcEEEEEecC-----CCCCccHHHHHHh----------hccCCCceEEEEecCceeecCcccCceeccchhhHH Confidence 42 3334433211 1112233333322 235789999999999988877643 4444555 3 Q ss_pred HHHHHHHHhhhhcCCceecccceecceeeeeeeeeecCChhHHhhhhhccceEEEEecCCeEEEEcc-eecCCCccccce Q lcl|Aclame:pro 477 ADIAGLCARTDAVSQPWMSPAGYNRGQIMNVVKLAIEPRKAHRDRLYQAAINPVIGAGGEGFILMGD-KTATTVPSPFDR 555 (666) Q Consensus 477 ~~~ag~~a~~d~~~g~~~span~~~~~i~g~~~~~~~~~~~~~~~Ln~~gIn~i~~~~g~G~~~wG~-rT~~~~~~~~~~ 555 (666) +++||+++.. ++++||.|+.+. |+.++...+++.|++.|+++|+++++..+++++++|.+ +|+.+ +..|++ T Consensus 401 A~vAGl~a~~----~~~~slT~~~i~---gi~~l~~~~s~~e~e~ll~~Gv~~l~~~~~~~v~Iv~gItT~~s-~~~~~~ 472 (581) T protein:vir:10 401 AAVAGKSVSA----IAAMPLTRKVIR---GFSGPAEVQRDGEKSRESSEGLMVIEKTPRNLVHVRHGVTTDPT-SLHTRE 472 (581) T ss_pred HHHHHHhhcc----ccccCccccccc---ccccccccCCHHHHHHHHhCCeEEEEEecCCeEEEEeeeecCCC-CCccee Confidence 4455555554 588899999765 45667888999999999999999999999999987555 55554 458999 Q ss_pred eehhhHHHHHHHHHHHHHH--HHhhCCCCHHHHHHHHHHHHHHHHHHHhcCCeeeeEEEEcccCCCHHHhhCCEEEEEEE Q lcl|Aclame:pro 556 INVRRLFNMLKKNIGDSSK--YKLFENNDNFTRASFRMEVSQYLSTIRSLGGIYDFRVQCDTTNNTPDVIDRNEFVASMF 633 (666) Q Consensus 556 i~vrR~~~~i~~~~~~~~~--~~v~epn~~~~~~~i~~~i~~~l~~l~~~gal~g~~v~~d~~~n~~~~i~~G~~~~~i~ 633 (666) |++||+++++.+.+++.++ +|++|||++.+|.+|+..+..||..||++|+|.||+.. +.++.+.+.++++++|. T Consensus 473 i~~iR~~D~v~~~ir~~~~~~~fIG~~n~~~~r~~ik~~i~~~L~~l~~~g~I~~~~~~----~~~~~~~~~d~v~V~i~ 548 (581) T protein:vir:10 473 WNIIGQQDVMVYRIRDYLDADGLIGMPIYDTTIVQVKASAEAALVWLVDNNIIRGYRNL----KARQIERQPDVIEVRYE 548 (581) T ss_pred eeeehhhhHHHHHHHHHhhhhcCCCcccCHHHHHHHHHHHHHHHHHHHhcCcccCCccc----eeeeeecCCCEEEEEEE Confidence 9999999999999999985 48889999999999999999999999999999998642 23566678899999999 Q ss_pred EEecCCccEEEEEEEEeecchhHHHHHHHHhcC Q lcl|Aclame:pro 634 IKPAKSINYIMLNFTAVATGSDFDEIIGPVNQA 666 (666) Q Consensus 634 ~~p~~p~e~i~~~~~~~~~~~~~~e~~~~~~~~ 666 (666) ++|++|+|||.+|+......-.+.--+..---- T Consensus 549 v~Pv~~i~~I~vti~~~p~~~~~~~~~~~~~~~ 581 (581) T protein:vir:10 549 WRPAYPLNYIVVRYSIAPETGDITSTIEGTTSF 581 (581) T ss_pred EEecccceEEEEEEEEecCCCceEEEEeccccC Confidence 999999999999988776443222111100000 No 48 >protein:vir:78986 Length: 436 # NCBI annotation: putative sheath tail protein # Family: family:all:632 # MgeID: mge:1861 # MgeName: phiC2 # Cross-refs: genbank:acc:YP_001110731;genbank:gi:134287348;genbank:GeneID:4955160 Probab=99.96 E-value=7.3e-29 Score=174.82 Aligned_cols=405 Identities=16% Similarity=0.153 Sum_probs=254.0 Q ss_pred Cc----------eecCceEEEEecCC-ccccccCcCceEEEEeccCCCCCcCEEeCC---HHHHHHHcCCcCCCchhHHH Q lcl|Aclame:pro 1 MT----------LLSPGFETKETTLS-TTIVQSATGRAALVGKFQWGPAFQIIQVTN---EVELVNKFGQPDNNTADYFM 66 (666) Q Consensus 1 ~~----------~~~PGVyvee~~~~-~~i~~v~tsv~~fvG~~~~Gpv~~p~~i~s---~~~~~~~fG~~~~~~~~~~~ 66 (666) |+ =.-||+|++-++.. ..+.+....+.++...+.|||+++++.|++ ..++...||.. ...+.... T Consensus 1 ~~magg~~~~~~K~~PG~Y~n~~~~~~~~~~~~~rGi~a~p~~~~wGp~~~v~~i~~~~~~~~~~~~~G~~-~~~~~~~~ 79 (436) T protein:vir:78 1 MALGGGTFVTQNKVLPGSYINFVSATRATSSLSDRGIVAMPLELDWGIDEEVFQVTSDDFEKYSTKYFGYD-YTHEKLKG 79 (436) T ss_pred CcccceeeccceeecCceEEEEEecCcceeeccCCeEEEEEEEecCCCCceeEEeecccchHHHHHHhcCc-cchHHHHH Confidence 33 24799999999755 568899999999999999999999999998 56899999953 22222334 Q ss_pred HHHHHHhCCCeEEEEEcccCcccccccccccccceeeecccccccccccceeeeccccccccccccccccccceeEEeec Q lcl|Aclame:pro 67 SGANFLQYGNDLRVVRVLNKEKAKNATALAGNIEFEITNEGSNYEVGDTIKIKHNRQDIETAGKVTKVDGDGKVKGVFIP 146 (666) Q Consensus 67 ~~~~f~ngg~~~~vvRv~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (666) ++.. +.|++.+++.|+.++..+++. T Consensus 80 l~~~-~~~~~tv~~yrl~~G~~a~~~------------------------------------------------------ 104 (436) T protein:vir:78 80 LRDL-FKNIRLGYFYKLNKGVKASCS------------------------------------------------------ 104 (436) T ss_pred HHHH-hcCCCEEEEEECCCcceeeee------------------------------------------------------ Confidence 5554 477899999998543211100 Q ss_pred cccccccccccceeeecccceeEEEeecccccceeeeeeeeeccceeeeeeccchhhccccceeeeeecccceeeeeecc Q lcl|Aclame:pro 147 TGKIIAHAKAIGVYPELDGDWTAEFTSSSGNGSAALSVTKIVTDSGLLLTDLETSRANITNQTFLTKLQKYDMPAVSAIY 226 (666) Q Consensus 147 t~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~A~~ 226 (666) ...|.+ T Consensus 105 --------------------------------------------------------------------------v~~Aky 110 (436) T protein:vir:78 105 --------------------------------------------------------------------------IATARC 110 (436) T ss_pred --------------------------------------------------------------------------eeeeec Confidence 012356 Q ss_pred ccccccceeeeeeccccccccccccccccccccccceeeeeeccCcCcccceeeecccccccceeeecccccccccccch Q lcl|Aclame:pro 227 AGEIGNSLEVEILARSAFKNTAPDLTMYPYGGERTAARNLIPYAPQNDNQYAFIVRRDGVVVESYVLSTLKGDKDVYGNS 306 (666) Q Consensus 227 ~g~~gn~i~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~et~~ls~~~~~~~~~~~~ 306 (666) +|..||.++|.+..... ....+.+.+......+++-.+... T Consensus 111 ~g~~gn~i~v~v~~~~~-----------------------------d~~~~dv~~~~g~~~~d~~~~~~~---------- 151 (436) T protein:vir:78 111 SGIRGNDLKVIVTTNID-----------------------------DNAKFDVVTLLDNKKVDTQIAKVI---------- 151 (436) T ss_pred CCCCCcEEEEEeccccc-----------------------------ccCceEEEEEecchhhhhhhHHHH---------- Confidence 67777777766532110 111122222222222221111100 Q ss_pred hhhHhHhcccCceEEEEeccccccccceeeeecCcccccccccccccccccccchhhhhhhhhcchhhcCccEEecccCC Q lcl|Aclame:pro 307 IYMDDFFGRGSSQYIYATAQGWVDGFSGIISLAGGVSANEATTGGVGADPFIGAMMQGWGLFAERESIHVNLLIAGACAG 386 (666) Q Consensus 307 ~~~~~~~~~~~s~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ll~~p~~~~ 386 (666) .+. ..+.++.....+. ........|.||.++... ...++.+ .+...|...++.|++|+. T Consensus 152 ---~~l---~~n~~V~~~~~g~-la~~a~~~LtGG~dG~~~---------T~~dy~~---al~~le~~~fn~l~~~~~-- 210 (436) T protein:vir:78 152 ---TEL---QDNDYVTWKKEAT-LEATAGLTFTNGTNGEAV---------TGTEYQA---FLDKIESYSFNALGCLAT-- 210 (436) T ss_pred ---hhc---cCCceEEEEeccc-ccccceeeeecccccccc---------chHHHHH---HHHHHcccceeEEEecCC-- Confidence 000 1122222222111 112223456666654321 1123333 333445567999999874 Q ss_pred CchhHHHHHHHHHHHhhccccE-----EEEEcCCccccccccccCCHHHHHHHHhhccccchhhcccCcceEEEEcCeEE Q lcl|Aclame:pro 387 EGDAFSTVQKHAVSIGDERQDC-----LVMVSPPRSTVVNIPVTTAIDNLIAWREGSGNYNENNMNINTTYAVIDGNYKY 461 (666) Q Consensus 387 ~~~~~~~v~~~~~~~~~~~~~~-----~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~p~~~ 461 (666) ..++++.+.+++.++|+. -+++.... ..+.....-+. T Consensus 211 ----d~~~~~~~~a~ikr~re~~g~~~~aV~~~~~------------------------------~~d~EgIInv~---- 252 (436) T protein:vir:78 211 ----TAEIKSLFVEFTKRMRDKVGAKFQTVLYKKN------------------------------DADYEGVVSVE---- 252 (436) T ss_pred ----ChHHHHHHHHHHHHHHhhcCCeEEEEecCCC------------------------------CCCCceEEEee---- Confidence 245777888888877642 12211100 01111111111 Q ss_pred EecCcCCceeE--echHHHHHHHHHhhhhcCCceecccceecceeeeeeeeeecCChhHHhhhhhccceEEEEecCCeEE Q lcl|Aclame:pro 462 QYDKYNDVNRW--VPLAADIAGLCARTDAVSQPWMSPAGYNRGQIMNVVKLAIEPRKAHRDRLYQAAINPVIGAGGEGFI 539 (666) Q Consensus 462 ~~d~~~~~~~~--~p~s~~~ag~~a~~d~~~g~~~span~~~~~i~g~~~~~~~~~~~~~~~Ln~~gIn~i~~~~g~G~~ 539 (666) +...+. .+ .-.++.+||++|.++ +.+|+.|+.+. ++......+++.|++.+.++|.-++.+. +++++ T Consensus 253 --n~v~g~-~~~~~~~~a~vAG~~Ag~~----~~~S~T~~~~~---~~~~v~~~~t~~e~~~ai~~G~lvl~~d-~~~v~ 321 (436) T protein:vir:78 253 --NKIKDT-GLLESSLIYWTTGAIAGCD----INKSNTNKRYD---GEFDVDVNYTQIHLEEALKTGKFIFHKV-GDEVH 321 (436) T ss_pred --cccCCc-eechhHHHHHHHHHHhcCc----cccCccceecC---ccccccccCCHHHHHHHHhCCeEEEEEe-CCeEE Confidence 112221 11 124677889998877 55688888643 5566777899999999999999888765 55666 Q ss_pred EEccee-c----CCCccccceeehhhHHHHHHHHHHHHHH-HHhhC-CCCHHHHHHHHHHHHHHHHHHHhcCCeeeeE-- Q lcl|Aclame:pro 540 LMGDKT-A----TTVPSPFDRINVRRLFNMLKKNIGDSSK-YKLFE-NNDNFTRASFRMEVSQYLSTIRSLGGIYDFR-- 610 (666) Q Consensus 540 ~wG~rT-~----~~~~~~~~~i~vrR~~~~i~~~~~~~~~-~~v~e-pn~~~~~~~i~~~i~~~l~~l~~~gal~g~~-- 610 (666) +--+-+ + ...+..|+.|.++|++|+|.+.+++... .|+++ ||+..-|..++..|+.||++|.++|+|..|. T Consensus 322 I~~~VNTltt~~~~k~~~~~kI~vir~~D~i~~di~~~~~~~yiGKv~N~~dgr~~l~~~i~~yl~~L~~~g~I~~f~~~ 401 (436) T protein:vir:78 322 VLEDINTFVSFTDEKNDDFSSNQSVRVLDQIANDIATLFNTKYLGEVPNDKSGRISFWNDVVKHHEQLQNMRAIEDFKAD 401 (436) T ss_pred EEEccccceecCCCCCcchhhhhHHHHHHHHHHHHHHHhhhccccccCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCc Confidence 655543 2 2234689999999999999999998875 59996 5999999999999999999999999999886 Q ss_pred -EEEcccCCCHHHhhCCEEEEEEEEEecCCccEEEEEEEEe Q lcl|Aclame:pro 611 -VQCDTTNNTPDVIDRNEFVASMFIKPAKSINYIMLNFTAV 650 (666) Q Consensus 611 -v~~d~~~n~~~~i~~G~~~~~i~~~p~~p~e~i~~~~~~~ 650 (666) +..++. + ....+++.+.++|+..||+|.+++..- T Consensus 402 Dv~v~~~-~-----~~~~v~v~~~v~pvdamekiy~ti~v~ 436 (436) T protein:vir:78 402 DVSVEPG-S-----DKKTVVVSDAVKVISAMSKLYMTVSVS 436 (436) T ss_pred ceEEeec-C-----CCCEEEEEEEEEEEEeeeeEEEEEEEC Confidence 333221 1 356788999999999999999997765 No 49 >protein:vir:102359 Length: 356 # NCBI annotation: XkdK protein # Family: family:all:632 # MgeID: mge:1566 # MgeName: phi CD119 # Cross-refs: genbank:acc:YP_529565;genbank:gi:90592650;genbank:GeneID:3974491 Probab=99.34 E-value=1e-12 Score=86.29 Aligned_cols=317 Identities=15% Similarity=0.064 Sum_probs=164.5 Q ss_pred cccccccccccceeeeeeccC---cCcccce-eeecccccccceee-ecccccc--cccccchhhhHhHhcccCceEEEE Q lcl|Aclame:pro 251 LTMYPYGGERTAARNLIPYAP---QNDNQYA-FIVRRDGVVVESYV-LSTLKGD--KDVYGNSIYMDDFFGRGSSQYIYA 323 (666) Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~~-~~v~~~g~~~et~~-ls~~~~~--~~~~~~~~~~~~~~~~~~s~~i~~ 323 (666) ..+ -|.....+..... ....... ..+..+.. +.+. ++....- .....+..++...+. T Consensus 1 ~~g-----lp~i~i~f~~~a~ta~~~g~rGiv~~il~d~~--~~~~~~~~~~~v~~~~~~~n~~~i~~~~~--------- 64 (356) T protein:vir:10 1 MAG-----LVNINIEFKELATSFIQRSKAGIVAIILKDTT--KMYKELTSEDDIPISLSADNKKYIKYGFV--------- 64 (356) T ss_pred CCC-----CCceeEEEeecceeeccCCccceEEEEEecCC--cceeEEeccccchhHHHHHHHHHHHHHhh--------- Confidence 110 0111111110000 0000001 11111111 0000 0000000 000000001111110 Q ss_pred eccccccccceeeeecCcccccccccccccccccccchhhhhhhhhcchhhcCccEEecccCCCchhHHHHHHHHHHHhh Q lcl|Aclame:pro 324 TAQGWVDGFSGIISLAGGVSANEATTGGVGADPFIGAMMQGWGLFAERESIHVNLLIAGACAGEGDAFSTVQKHAVSIGD 403 (666) Q Consensus 324 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ll~~p~~~~~~~~~~~v~~~~~~~~~ 403 (666) +.........+..+.. +.....+++... +...|.+.++.|++|+. ..++++.+.+++. T Consensus 65 ---g~~~~~~~~~p~~~~~----------~~~~t~~~y~~a---L~~le~~~fn~l~~~~~------d~~~~~~~~a~ik 122 (356) T protein:vir:10 65 ---GATDNEKVLRPSKVII----------STFTEDGKVEDI---LEELESVEFNYLCMPEA------IEAEKTKIVTWIK 122 (356) T ss_pred ---ccccccccccceeeee----------ecccCchhHHHH---HHHhcCccceEEEecCC------ChHHHHHHHHHHH Confidence 0000000000000000 000011233333 33445678999999963 2346667777776 Q ss_pred cccc----EEEEEcCCccccccccccCCHHHHHHHHhhccccchhhcccCcceEEEEcCeEEEecCcCCceeE--echHH Q lcl|Aclame:pro 404 ERQD----CLVMVSPPRSTVVNIPVTTAIDNLIAWREGSGNYNENNMNINTTYAVIDGNYKYQYDKYNDVNRW--VPLAA 477 (666) Q Consensus 404 ~~~~----~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~p~~~~~d~~~~~~~~--~p~s~ 477 (666) ++|+ .+..+-+.. + .+.....=+-..+ +.+ + ..+ .-.++ T Consensus 123 r~r~~~~~~~~~V~~~~----------~--------------------aD~EgIInv~n~~-~~~---g-~~~t~~~~~~ 167 (356) T protein:vir:10 123 KIREEESTEAKAVLANI----------K--------------------ADNEAIINFTENV-VVD---G-EEITAEKYTT 167 (356) T ss_pred HHHhcCCcEEEEEecCC----------C--------------------CCCceeEEeecCe-Eec---c-eeechhHHHH Confidence 6553 222221110 0 0111111111111 111 1 111 12357 Q ss_pred HHHHHHHhhhhcCCceecccceecceeeeeeeeeecCChhHHhhhhhccceEEEEecCCeEEEEcc-eec----CCCccc Q lcl|Aclame:pro 478 DIAGLCARTDAVSQPWMSPAGYNRGQIMNVVKLAIEPRKAHRDRLYQAAINPVIGAGGEGFILMGD-KTA----TTVPSP 552 (666) Q Consensus 478 ~~ag~~a~~d~~~g~~~span~~~~~i~g~~~~~~~~~~~~~~~Ln~~gIn~i~~~~g~G~~~wG~-rT~----~~~~~~ 552 (666) .+||++|..+ +.+|+.|+.+.. +. ....+++.|.+...++|--++.+.. +.+++--+ .|+ ...+.. T Consensus 168 ~vAG~~Ag~~----~n~S~T~~~~~~---~~-~~~~~t~~e~~~ai~~G~lvl~~d~-~~V~I~~~VNSltt~t~~k~~~ 238 (356) T protein:vir:10 168 RVASLIASTP----NTQSITYAPLDE---VE-SIVKIDKASADAKVQAGELILRRLS-GKIRIARGINSLTTLTAEKGEI 238 (356) T ss_pred HHHHHHhccc----hhccccceecCC---cc-ccccCCHHHHHHHHhCCeEEEEEEc-CeEEEEecCccceecCCCCCcc Confidence 8999999887 455888886543 22 2245889999999999999887764 44554444 343 223467 Q ss_pred cceeehhhHHHHHHHHHHHHHH-HHhhC-CCCHHHHHHHHHHHHHHHHHHHhcCCee-eeEEEEcccCC----------- Q lcl|Aclame:pro 553 FDRINVRRLFNMLKKNIGDSSK-YKLFE-NNDNFTRASFRMEVSQYLSTIRSLGGIY-DFRVQCDTTNN----------- 618 (666) Q Consensus 553 ~~~i~vrR~~~~i~~~~~~~~~-~~v~e-pn~~~~~~~i~~~i~~~l~~l~~~gal~-g~~v~~d~~~n----------- 618 (666) |+.|.+.|+++.|.+.+++... .|+++ ||+..-|..+...++.||++|.+.|+|. +|.+..|.+.. T Consensus 239 f~Kirvvr~~D~i~~Di~~~f~~~yiGKv~N~~dgr~~l~~ai~~y~~~L~~~~~I~~~~~~eid~e~q~~~~~~~g~d~ 318 (356) T protein:vir:10 239 FQKIKLVDTKDLISKDIKNIYVEKYLRKCPNTYDNKCLFIVAVQSYLTELAKQELIDSNFTVEIDLEKQKEYLEGKKIAV 318 (356) T ss_pred hhhhHHHHHHHHHHHHHHHHHhhccccccCCCHHHHHHHHHHHHHHHHHHHhCCccccCceeEecccchHHHhhhccccc Confidence 9999999999999999998875 69999 4999999999999999999999999996 56777765432 Q ss_pred ---CHHHhh----CCEEEEEEEEEecCCccEEEEEEEE Q lcl|Aclame:pro 619 ---TPDVID----RNEFVASMFIKPAKSINYIMLNFTA 649 (666) Q Consensus 619 ---~~~~i~----~G~~~~~i~~~p~~p~e~i~~~~~~ 649 (666) +...+. .-.+++.+.++|+-.||.|.+++.. T Consensus 319 ~~~~d~~v~~~~~~~~v~~~~~v~~vdamE~iy~ti~v 356 (356) T protein:vir:10 319 SKMKENEIKEANTGSNGFYLINLKLVDAMEDINIRVQM 356 (356) T ss_pred cccccceeecccCCcEEEEEEEEEEEeeeeeEEeEEeC Confidence 222222 2447799999999999999999887 No 50 >protein:vir:4517 Length: 498 # NCBI annotation: tail sheath protein # Family: family:all:369 # MgeID: mge:97 # MgeName: V # Cross-refs: genbank:acc:NP_599043;genbank:gi:19549001;genbank:GeneID:935236 Probab=99.23 E-value=6e-11 Score=76.64 Aligned_cols=443 Identities=14% Similarity=0.085 Sum_probs=218.9 Q ss_pred CceecCceEEEEecCCccccccCcCceEEEEecc---CCCCCcCEEeCCHHHHHHHcCCcCCCchhHHHHHHHHHhCC-C Q lcl|Aclame:pro 1 MTLLSPGFETKETTLSTTIVQSATGRAALVGKFQ---WGPAFQIIQVTNEVELVNKFGQPDNNTADYFMSGANFLQYG-N 76 (666) Q Consensus 1 ~~~~~PGVyvee~~~~~~i~~v~tsv~~fvG~~~---~Gpv~~p~~i~s~~~~~~~fG~~~~~~~~~~~~~~~f~ngg-~ 76 (666) =....||+|+| ++.+....+......-+||..- ..+.++|++|+|..|-...|| ..+.+..+++.+..+.- . T Consensus 10 ~~iRvP~~y~E-~dns~A~~~~~~q~vLiiGq~la~gs~~~~~~v~v~s~~~a~~lfG---~GSml~~M~~a~~~~n~~~ 85 (498) T protein:vir:45 10 SNTLVPLFYAE-MDNQAANTAQDSGASLLIGHANNGAEIVANSLVLMPSADYARQICG---AGSQLARMVEAYRQTDPFG 85 (498) T ss_pred cccccCeEEEE-EeCCCCCCCCCCcceEEEEecCCccccccceeEEecCHHHHHHhcC---cCcHHHHHHHHHHHhCCcc Confidence 23558999999 5433334444556778888863 347899999999999999999 67888888888888765 7 Q ss_pred eEEEEEcccCcccccccccccccceeeecccccccccccceeeeccccccccccccccccccceeEEeeccccccccccc Q lcl|Aclame:pro 77 DLRVVRVLNKEKAKNATALAGNIEFEITNEGSNYEVGDTIKIKHNRQDIETAGKVTKVDGDGKVKGVFIPTGKIIAHAKA 156 (666) Q Consensus 77 ~~~vvRv~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~a~~ 156 (666) ++|++-+.|.... +++ + .++...+.+. .| .+.+.++ +....+.+..++. .. T Consensus 86 ~l~~i~~~d~aG~-aA~---g--~it~tg~at~--~G-~l~l~Ig----------------g~~v~v~V~~gdT-aa--- 136 (498) T protein:vir:45 86 ELYVIAVPEATGA-AAT---V--TLTVTGEATE--SG-TVNVYVG----------------RTRVQAPVTNGDN-VT--- 136 (498) T ss_pred eEEEEeeCCcccc-eeE---E--EEEeecccCC--Cc-EEEEEEC----------------CEEEEEEecCCCC-HH--- Confidence 9999998653211 111 1 1111111000 00 0111110 0001111110000 00 Q ss_pred cceeeecccceeEEEeecccccceeeeeeeeeccceeeeeeccchhhccccceeeeeecccceeeeeeccccccccceee Q lcl|Aclame:pro 157 IGVYPELDGDWTAEFTSSSGNGSAALSVTKIVTDSGLLLTDLETSRANITNQTFLTKLQKYDMPAVSAIYAGEIGNSLEV 236 (666) Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~A~~~g~~gn~i~v 236 (666) ..+..+. +..+....-...+....+...+++...|..||.+.+ T Consensus 137 ----------------------~vA~al~---------------aaina~~~lPVTA~~~~~~VtlTAr~kG~~GN~I~l 179 (498) T protein:vir:45 137 ----------------------TIASSIQ---------------DAINAVPTLPFTASSSAGVVTLTARHKGLCGNEIPV 179 (498) T ss_pred ----------------------HHHHHHH---------------HHHhCCCCCceEEEecCceEEEEeeccCccccceeE Confidence 0000000 000000000001111234466788888999998887 Q ss_pred eeeccccccccccccccccccccccceeeeeeccCcCcccceeeecccccccceeeecccccccccccchhhhHhHhccc Q lcl|Aclame:pro 237 EILARSAFKNTAPDLTMYPYGGERTAARNLIPYAPQNDNQYAFIVRRDGVVVESYVLSTLKGDKDVYGNSIYMDDFFGRG 316 (666) Q Consensus 237 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~et~~ls~~~~~~~~~~~~~~~~~~~~~~ 316 (666) .+.-+.... |.. . T Consensus 180 ~~~~~~~~~---------------------------------------ge~----------------------------~ 192 (498) T protein:vir:45 180 SLNYYGFGG---------------------------------------GEV----------------------------L 192 (498) T ss_pred EEeeccccc---------------------------------------ccc----------------------------c Confidence 764211000 000 0 Q ss_pred CceEEEEeccccccccceeeeecCcccccccccccccccccccchhhhhhhhhcchhhcCccEEecccCCCchhHHHHHH Q lcl|Aclame:pro 317 SSQYIYATAQGWVDGFSGIISLAGGVSANEATTGGVGADPFIGAMMQGWGLFAERESIHVNLLIAGACAGEGDAFSTVQK 396 (666) Q Consensus 317 ~s~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ll~~p~~~~~~~~~~~v~~ 396 (666) ...+. .....+.||.... ++. ..++.......++|++|-. + .+-.. T Consensus 193 p~Glt-----------~~itamagGag~P--------------D~a---~alaal~~~~~~~I~~p~~--D----~asL~ 238 (498) T protein:vir:45 193 PAGVQ-----------IAVATGTAGTGAP--------------VLT---GAVAAMADEPFDYIGLPFN--D----TASVN 238 (498) T ss_pred cceee-----------EEEEccCCCccCc--------------hhH---HHHHHhccCCccEEEEeeC--C----HHHHH Confidence 00000 0011122221100 111 1122222345678888743 1 11223 Q ss_pred HHHHHhh---------ccccEEEEEcCCccccccccccCCHHHHHHHHhhccccchhhcccCcceEEEEcCeEEEecCcC Q lcl|Aclame:pro 397 HAVSIGD---------ERQDCLVMVSPPRSTVVNIPVTTAIDNLIAWREGSGNYNENNMNINTTYAVIDGNYKYQYDKYN 467 (666) Q Consensus 397 ~~~~~~~---------~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~p~~~~~d~~~ 467 (666) ++.+|++ +++.+.++.. ...+..+..+|-.. .|+.|..+.|.... T Consensus 239 al~~~L~~~sgRw~~~~q~~g~~~~a----------~~gT~~~l~t~g~~----------~N~~~it~~~~~~~------ 292 (498) T protein:vir:45 239 TLVTEMNDTSGRWSYARQLYGHVYTA----------KTGTLSELVNAGDQ----------FNQQHITLAGYEKE------ 292 (498) T ss_pred HHHHHHhhhhhhhhHHhhcCeEEEEe----------ccCCHHHHHHhhhc----------cCCceEEEEecCCC------ Confidence 3334332 2233333322 23356777776654 45677766542110 Q ss_pred CceeEech---HHHHHHHHH---hhhhcCCceecccceecceeeeeeeeeecCChhHHhhhhhccceEEEEecCCeEEEE Q lcl|Aclame:pro 468 DVNRWVPL---AADIAGLCA---RTDAVSQPWMSPAGYNRGQIMNVVKLAIEPRKAHRDRLYQAAINPVIGAGGEGFILM 541 (666) Q Consensus 468 ~~~~~~p~---s~~~ag~~a---~~d~~~g~~~span~~~~~i~g~~~~~~~~~~~~~~~Ln~~gIn~i~~~~g~G~~~w 541 (666) ..-|| ++.+||..| +.|..| .--...+.||.- ..+...++..|+|.|..+||.++.--.|+ ..+- T Consensus 293 ---~~sp~~~~AAa~aa~~A~~l~~DPAr----PL~tl~L~Gi~~-p~~~~r~~~~ern~LL~~Gist~~V~~G~-V~I~ 363 (498) T protein:vir:45 293 ---TQTPADELAASRTARAAVFIRNDPAR----PTQTGELVGMLP-APKGKRFTMTEQQTLLSHGVATAYVESGV-LRIQ 363 (498) T ss_pred ---CCChHHHHHHHHHHHHHHHhhccccc----ccCceeecceec-CCchhcCChHHHHHHHhCCcceEEEcCCe-EEEE Confidence 11133 334444444 344332 112233333321 14456689999999999999999765443 4444 Q ss_pred cceec-----C-CCccccceeehhhHHHHHHHHHHHHHHHH-hhCC----CCHH-------HHHHHHHHHHHHHHHHHhc Q lcl|Aclame:pro 542 GDKTA-----T-TVPSPFDRINVRRLFNMLKKNIGDSSKYK-LFEN----NDNF-------TRASFRMEVSQYLSTIRSL 603 (666) Q Consensus 542 G~rT~-----~-~~~~~~~~i~vrR~~~~i~~~~~~~~~~~-v~ep----n~~~-------~~~~i~~~i~~~l~~l~~~ 603 (666) =..|. . ..|..|..|...|+.+|+.+.++...... --+. +++. +-..||..+-.-+++|..+ T Consensus 364 R~ITTY~~n~~G~~D~syLDi~T~~tl~yvr~~~r~~i~~kfpR~KLa~dg~~~~~gq~IvTp~~ir~ell~~y~~le~~ 443 (498) T protein:vir:45 364 RDVTTYRKNAYGVADNSYLDSETLHTSAYVLRKLKSVITSKYGRHKLASDGTRFGPGQAIVTPAVIKGELLATYRQLERA 443 (498) T ss_pred eeeeeeeecCCCCcchhhhhhhhHHHHHHHHHHHHHHhhhhcCCeeecccCcccCCCCcccchHHHHHHHHHHHHhhhhh Confidence 44443 1 23457999999999999999999887543 1111 1111 5678899999999999999 Q ss_pred CCeeee---E--EEEcccCCCHHHhhCCEEEEEEEEEecCCccE----EEEEEEEeecch Q lcl|Aclame:pro 604 GGIYDF---R--VQCDTTNNTPDVIDRNEFVASMFIKPAKSINY----IMLNFTAVATGS 654 (666) Q Consensus 604 gal~g~---~--v~~d~~~n~~~~i~~G~~~~~i~~~p~~p~e~----i~~~~~~~~~~~ 654 (666) |.+..+ + +.|....+ +..|+.+.+-...+-+.+- |.|+++.....+ T Consensus 444 givEn~~~~~~~LiVerd~~-----dpnRln~~~p~d~vn~L~V~A~~~~f~lq~~~~~~ 498 (498) T protein:vir:45 444 GIVENYELFKQYLVVERDAS-----VPNRLNTLFPPDYVNQLRVFAVVNQFRLQYSEESA 498 (498) T ss_pred ccccChhhhcceeEEEECCC-----CCcEEEEEecccccCchhhhhhhhhhheehhhcCC Confidence 999873 1 33432221 2245555553333333322 233333332222 No 51 >protein:vir:489 Length: 498 # NCBI annotation: putative sheath protein # Family: family:all:369 # MgeID: mge:11 # MgeName: P27 # Cross-refs: genbank:acc:NP_543096;swissprot:trembl:q8w623;genbank:gi:18249908;uniprot:Q8W623;genbank:GeneID:929698 Probab=99.22 E-value=6.3e-11 Score=76.52 Aligned_cols=443 Identities=12% Similarity=0.064 Sum_probs=219.5 Q ss_pred CceecCceEEEEecCCccccccCcCceEEEEeccC---CCCCcCEEeCCHHHHHHHcCCcCCCchhHHHHHHHHHhCC-C Q lcl|Aclame:pro 1 MTLLSPGFETKETTLSTTIVQSATGRAALVGKFQW---GPAFQIIQVTNEVELVNKFGQPDNNTADYFMSGANFLQYG-N 76 (666) Q Consensus 1 ~~~~~PGVyvee~~~~~~i~~v~tsv~~fvG~~~~---Gpv~~p~~i~s~~~~~~~fG~~~~~~~~~~~~~~~f~ngg-~ 76 (666) =.+..||+|+| ++.+....+.++...-+||..-- .|.++|++|+|..|-...|| ..+.+..+++.|..+.- . T Consensus 10 ~~iRvP~~y~E-~dns~A~~~~~~qrvLiiGq~la~gt~~~~~~v~v~s~~~a~~~fG---~GS~l~~M~~a~~~~n~~~ 85 (498) T protein:vir:48 10 SDTLVPLFYAE-MDNSAANTAVTSAPALLIGHASNDAAIEVNSLVLMPSADYARQICG---AGSQLARMVDVYRQTDPFG 85 (498) T ss_pred cccccceEEEE-EecCCCccccCCcceEEEeecCccccccccceEEecCHHHHHHhcC---cccHHHHHHHHHHHhCCCc Confidence 34568999998 44344444555567788888553 47899999999999999999 67888888888888766 7 Q ss_pred eEEEEEcccCcccccccccccccceeeecccccccccccceeeeccccccccccccccccccceeEEeeccccccccccc Q lcl|Aclame:pro 77 DLRVVRVLNKEKAKNATALAGNIEFEITNEGSNYEVGDTIKIKHNRQDIETAGKVTKVDGDGKVKGVFIPTGKIIAHAKA 156 (666) Q Consensus 77 ~~~vvRv~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~a~~ 156 (666) ++|++-+.|.... +++ + .++.....+. .| .+.+.++ +....+.+..++. ... T Consensus 86 ~l~~i~~~D~ag~-aA~---g--~it~tg~at~--~G-~l~l~Ig----------------g~~v~v~V~~gdT-aa~-- 137 (498) T protein:vir:48 86 ELYVIAVPEARGA-AAT---V--RVTVTGEAEE--SG-TLSLYVG----------------RSSVQVPVVNGDD-ATA-- 137 (498) T ss_pred eeEEEeeCCcccc-eeE---E--EEEecccccC--Cc-eEEEEEC----------------CEEEEEeecCCCC-HHH-- Confidence 9999999763211 111 1 1111111000 00 0111100 0001111110000 000 Q ss_pred cceeeecccceeEEEeecccccceeeeeeeeeccceeeeeeccchhhccccceeeeeecccceeeeeeccccccccceee Q lcl|Aclame:pro 157 IGVYPELDGDWTAEFTSSSGNGSAALSVTKIVTDSGLLLTDLETSRANITNQTFLTKLQKYDMPAVSAIYAGEIGNSLEV 236 (666) Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~A~~~g~~gn~i~v 236 (666) .+..+. +..+....-..++....+...+++...|..||.+.+ T Consensus 138 -----------------------vA~al~---------------aai~a~~~lPVTA~~~~~~VtlTAr~kG~~GN~I~l 179 (498) T protein:vir:48 138 -----------------------VATAIK---------------EAVNGVITLPFAASSDAGVVTLTARHKGLYGNELPV 179 (498) T ss_pred -----------------------HHHHHH---------------HHHhCCCCcceEEEecCcEEEEEeeeccccccccee Confidence 000000 000000000001111223456777888888888877 Q ss_pred eeeccccccccccccccccccccccceeeeeeccCcCcccceeeecccccccceeeecccccccccccchhhhHhHhccc Q lcl|Aclame:pro 237 EILARSAFKNTAPDLTMYPYGGERTAARNLIPYAPQNDNQYAFIVRRDGVVVESYVLSTLKGDKDVYGNSIYMDDFFGRG 316 (666) Q Consensus 237 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~et~~ls~~~~~~~~~~~~~~~~~~~~~~ 316 (666) .+.-+... .|... T Consensus 180 ~~~~~~~~---------------------------------------~ge~~---------------------------- 192 (498) T protein:vir:48 180 CLNYYGSG---------------------------------------GGEIL---------------------------- 192 (498) T ss_pred eeeeccCc---------------------------------------ccccc---------------------------- Confidence 66321100 00000 Q ss_pred CceEEEEeccccccccceeeeecCcccccccccccccccccccchhhhhhhhhcchhhcCccEEecccCCCchhHHHHHH Q lcl|Aclame:pro 317 SSQYIYATAQGWVDGFSGIISLAGGVSANEATTGGVGADPFIGAMMQGWGLFAERESIHVNLLIAGACAGEGDAFSTVQK 396 (666) Q Consensus 317 ~s~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ll~~p~~~~~~~~~~~v~~ 396 (666) ...+. .....++||.... ++. ..++.......++|++|-. + .+-.. T Consensus 193 p~Glt-----------~~itamsgGag~P--------------Dia---~aLaal~~~~~~~I~~p~~--D----~asl~ 238 (498) T protein:vir:48 193 PAGLQ-----------VVTEAGTAGSGAP--------------DLT---AAVAAMGDEAFDFIGLPFN--D----AASIN 238 (498) T ss_pred cceee-----------EEEEcccCCccCc--------------chH---HHHHhhccCCccEEEEeec--C----HHHHH Confidence 00000 0011122221110 111 1122223345788888743 1 12223 Q ss_pred HHHHHhhc---------cccEEEEEcCCccccccccccCCHHHHHHHHhhccccchhhcccCcceEEEEcCeEEEecCcC Q lcl|Aclame:pro 397 HAVSIGDE---------RQDCLVMVSPPRSTVVNIPVTTAIDNLIAWREGSGNYNENNMNINTTYAVIDGNYKYQYDKYN 467 (666) Q Consensus 397 ~~~~~~~~---------~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~p~~~~~d~~~ 467 (666) ++.+|+++ ++.+.++.. ...+..+..+|-.. .|+.|..+.|-. T Consensus 239 al~~~L~~~sgRw~~~~q~~g~~~~a----------~~gT~~~l~t~g~~----------~N~~~it~~~~~-------- 290 (498) T protein:vir:48 239 MMMTEMNDSSGRWSYARQLYGHVYTA----------KLGTLSELVNAGDM----------HNQQHITLAGYE-------- 290 (498) T ss_pred HHHHHHhhhhhhhhHHhhcCeEEEEe----------ccCCHHHHHHhhhc----------cCCceEEEEecC-------- Confidence 34444432 233333321 23356777776654 456777654421 Q ss_pred CceeEech---HHHHHHHHH---hhhhcCCceecccceecceeeeee--eeeecCChhHHhhhhhccceEEEEecCCeEE Q lcl|Aclame:pro 468 DVNRWVPL---AADIAGLCA---RTDAVSQPWMSPAGYNRGQIMNVV--KLAIEPRKAHRDRLYQAAINPVIGAGGEGFI 539 (666) Q Consensus 468 ~~~~~~p~---s~~~ag~~a---~~d~~~g~~~span~~~~~i~g~~--~~~~~~~~~~~~~Ln~~gIn~i~~~~g~G~~ 539 (666) +. ..-|+ ++.+|++.| +.|..| .--... +.|+. .+...++..|+|.|.-+||.++.- .+.-.. T Consensus 291 ~~-~~~p~~~~AAa~a~~aA~~l~~DPAr----PLqtl~---L~Gi~~p~~~~r~~~~ern~LL~~Gist~~V-~~G~V~ 361 (498) T protein:vir:48 291 KE-TQSPVDELVASRLAREAVFIRNDPAR----PTQTGE---LVGMLPAPKGKRFIMTEQQTLLSHGVATAYV-EGGTLR 361 (498) T ss_pred CC-CCChHHHHHHHHHHHHHHhhhccccc----ccccee---eeccccCCchhcCChHHHHHHHhcCcceEEE-cCCeEE Confidence 11 11133 233444444 444333 111223 34443 445668999999999999999976 444455 Q ss_pred EEcceec-----C-CCccccceeehhhHHHHHHHHHHHHHHHH-hhCCC----CHH-------HHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 540 LMGDKTA-----T-TVPSPFDRINVRRLFNMLKKNIGDSSKYK-LFENN----DNF-------TRASFRMEVSQYLSTIR 601 (666) Q Consensus 540 ~wG~rT~-----~-~~~~~~~~i~vrR~~~~i~~~~~~~~~~~-v~epn----~~~-------~~~~i~~~i~~~l~~l~ 601 (666) +-=..|. . ..|..|..|...|+.+|+.+.++...... --+.. ++. +-..||..+-.-+++|. T Consensus 362 I~R~ITTY~~n~~G~~D~syLDi~T~~tl~yvr~~~r~~i~~kfpR~KLa~dg~~~~~gq~IvTp~~ir~eli~~y~~le 441 (498) T protein:vir:48 362 IQRSVTTYKKNAYGVADNSYLDSETLHTSAYVLRKLKSVITSKYGRHKLANDGTRFGPGQAIVTPAVIKGELLATYRQME 441 (498) T ss_pred EEeeeeeeeecCCCCcchhhhhhhhHHHHHHHHHHHHHHhhhhcCCceecccCcccCCCCcccchHHHHHHHHHHHHhhh Confidence 5555554 1 23457999999999999999999877532 21111 111 56788999999999999 Q ss_pred hcCCeeee---E--EEEcccCCCHHHhhCCEEEEEEEEEecCCccEEEEEEEEeecchhHHHHHHHHhcC Q lcl|Aclame:pro 602 SLGGIYDF---R--VQCDTTNNTPDVIDRNEFVASMFIKPAKSINYIMLNFTAVATGSDFDEIIGPVNQA 666 (666) Q Consensus 602 ~~gal~g~---~--v~~d~~~n~~~~i~~G~~~~~i~~~p~~p~e~i~~~~~~~~~~~~~~e~~~~~~~~ 666 (666) .+|.+..+ + +.|....+ +..|+.+.+-...+-+.+-+ +...+++-+.++| T Consensus 442 ~~given~~~~~~~LiVerd~~-----dpnRln~~~p~d~vn~L~V~----------A~~~~f~lq~~~~ 496 (498) T protein:vir:48 442 RAGIVENYDLFKQYLIVERDAD-----NPNRLNTLFPPDYVNQLRVF----------AVVNQFRLQYSEE 496 (498) T ss_pred hhccccChhhhcceeEEEECCC-----CCcEEEEEecccccCchhhh----------hhhhhhhhhhhhc Confidence 99999873 2 33432221 22455555533333332221 1222233333333 No 52 >protein:vir:4463 Length: 498 # NCBI annotation: Tail Sheath protein # Family: family:all:369 # MgeID: mge:96 # MgeName: ST64B # Cross-refs: genbank:acc:NP_700386;genbank:gi:23505458;genbank:GeneID:955665 Probab=99.19 E-value=1.1e-10 Score=75.25 Aligned_cols=443 Identities=15% Similarity=0.108 Sum_probs=216.7 Q ss_pred CceecCceEEEEecCCccccccCcCceEEEEeccC---CCCCcCEEeCCHHHHHHHcCCcCCCchhHHHHHHHHHhCC-C Q lcl|Aclame:pro 1 MTLLSPGFETKETTLSTTIVQSATGRAALVGKFQW---GPAFQIIQVTNEVELVNKFGQPDNNTADYFMSGANFLQYG-N 76 (666) Q Consensus 1 ~~~~~PGVyvee~~~~~~i~~v~tsv~~fvG~~~~---Gpv~~p~~i~s~~~~~~~fG~~~~~~~~~~~~~~~f~ngg-~ 76 (666) =....||+|+| ++.+..-........-+||..-- .|.++|++|+|.+|-...|| ..+.+..+++.+..+.- . T Consensus 10 ~~iRvP~~y~E-~dns~A~~~~~~q~vLiiGq~la~gs~~~~~~v~v~s~~~a~~~fG---~GSml~~M~~a~~~~n~~~ 85 (498) T protein:vir:44 10 SDTRVPLFYAE-MDNSAANTARDSGASLLIGHASNDASIAVNSLVLVSSVDYARQICG---AGSQLARMVGAYRKTDPFG 85 (498) T ss_pred cccccCeEEEE-EeCCCCCCCcCCcceEEEEecCcccccccceeEeecCHHHHHHhcC---cccHHHHHHHHHHHhCCCc Confidence 23458999999 44333333333446678887543 47899999999999999999 68888888999888766 7 Q ss_pred eEEEEEcccCcccccccccccccceeeecccccccccccceeeeccccccccccccccccccceeEEeeccccccccccc Q lcl|Aclame:pro 77 DLRVVRVLNKEKAKNATALAGNIEFEITNEGSNYEVGDTIKIKHNRQDIETAGKVTKVDGDGKVKGVFIPTGKIIAHAKA 156 (666) Q Consensus 77 ~~~vvRv~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~a~~ 156 (666) ++|++-+.|.. ..+++ + .++...+.+. .| .+.+.++ +....+.+..++. ... T Consensus 86 ~l~~i~~~D~a-G~aAt---g--~it~tg~at~--~G-~l~l~Ig----------------g~~v~v~V~~gdT-aa~-- 137 (498) T protein:vir:44 86 ELYVIAVPEST-GAAAT---V--ALTVTGEATE--TG-TVNVYTG----------------RTRVQAPVTSGDD-AAA-- 137 (498) T ss_pred eeEEEecCCcc-cceeE---E--EEEeecccCC--Cc-EEEEEEC----------------CEEEEEEecCCCC-HHH-- Confidence 99999886532 11111 1 1111111000 00 0111110 0001111111000 000 Q ss_pred cceeeecccceeEEEeecccccceeeeeeeeeccceeeeeeccchhhccccceeeeeecccceeeeeeccccccccceee Q lcl|Aclame:pro 157 IGVYPELDGDWTAEFTSSSGNGSAALSVTKIVTDSGLLLTDLETSRANITNQTFLTKLQKYDMPAVSAIYAGEIGNSLEV 236 (666) Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~A~~~g~~gn~i~v 236 (666) .+..+. +..+....-...+....+...+++...|..||.+.+ T Consensus 138 -----------------------vA~al~---------------aaina~~~lPVTA~~~~~~vtlTAr~kG~~GN~I~l 179 (498) T protein:vir:44 138 -----------------------VAVSIK---------------DAVNANPDLPFTATSEAGVVTLTARHKGLYGNEIPV 179 (498) T ss_pred -----------------------HHHHHH---------------HHHhCCCCCceEEeeccceEEEEEeccCcccCcceE Confidence 000000 000000000001111223456778888888888887 Q ss_pred eeeccccccccccccccccccccccceeeeeeccCcCcccceeeecccccccceeeecccccccccccchhhhHhHhccc Q lcl|Aclame:pro 237 EILARSAFKNTAPDLTMYPYGGERTAARNLIPYAPQNDNQYAFIVRRDGVVVESYVLSTLKGDKDVYGNSIYMDDFFGRG 316 (666) Q Consensus 237 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~et~~ls~~~~~~~~~~~~~~~~~~~~~~ 316 (666) .+.-+.... |... T Consensus 180 ~~~~~~~~~---------------------------------------ge~~---------------------------- 192 (498) T protein:vir:44 180 TLNYYGFGG---------------------------------------GEVL---------------------------- 192 (498) T ss_pred EEeeccCcc---------------------------------------cccc---------------------------- Confidence 764211000 0000 Q ss_pred CceEEEEeccccccccceeeeecCcccccccccccccccccccchhhhhhhhhcchhhcCccEEecccCCCchhHHHHHH Q lcl|Aclame:pro 317 SSQYIYATAQGWVDGFSGIISLAGGVSANEATTGGVGADPFIGAMMQGWGLFAERESIHVNLLIAGACAGEGDAFSTVQK 396 (666) Q Consensus 317 ~s~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ll~~p~~~~~~~~~~~v~~ 396 (666) ...+. .....++||.... ++. ..++.......++|++|-. + .+-.. T Consensus 193 p~Glt-----------~titamsgGag~P--------------Dia---~alaal~~~~~~~i~~p~~--D----~asl~ 238 (498) T protein:vir:44 193 PAGVN-----------ITVASGVKGAGAP--------------ALN---DAVAAMGDEPFDYIGLPFN--D----TASVN 238 (498) T ss_pred cccee-----------EEEEcccCCccCc--------------hhH---HHHHhhccCCccEEEEeec--C----HHHHH Confidence 00000 0011122221100 111 1122222335688888742 1 12223 Q ss_pred HHHHHhhc---------cccEEEEEcCCccccccccccCCHHHHHHHHhhccccchhhcccCcceEEEEcCeEEEecCcC Q lcl|Aclame:pro 397 HAVSIGDE---------RQDCLVMVSPPRSTVVNIPVTTAIDNLIAWREGSGNYNENNMNINTTYAVIDGNYKYQYDKYN 467 (666) Q Consensus 397 ~~~~~~~~---------~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~p~~~~~d~~~ 467 (666) ++.+|++. ++...++.. ..-+..++.+|-.. .|+.|..+.|.... T Consensus 239 al~~~L~~~sgRw~~~~q~~g~~~~a----------~~gT~a~l~t~g~~----------~N~~~it~~~~~~~------ 292 (498) T protein:vir:44 239 SMATEMNDSSGRWSYVRQLYGHVYTA----------KTGTLSELVAAGDQ----------FNLQHITLAGYEKD------ 292 (498) T ss_pred HHHHHHhhhhcchHHHhhcCeEEEEe----------ccCCHHHHHHhhhc----------cCCceEEEEecCCC------ Confidence 34444422 233333322 23456677776654 45667665432110 Q ss_pred CceeEech---HHHHHHHHH---hhhhcCCceecccceecceeeeee--eeeecCChhHHhhhhhccceEEEEecCCeEE Q lcl|Aclame:pro 468 DVNRWVPL---AADIAGLCA---RTDAVSQPWMSPAGYNRGQIMNVV--KLAIEPRKAHRDRLYQAAINPVIGAGGEGFI 539 (666) Q Consensus 468 ~~~~~~p~---s~~~ag~~a---~~d~~~g~~~span~~~~~i~g~~--~~~~~~~~~~~~~Ln~~gIn~i~~~~g~G~~ 539 (666) ..-|+ ++.+|++.| +.|..| .--... +.|+. .+...++..|+|.|..+||.++.--.|+ .. T Consensus 293 ---~~sp~~~~AAa~a~~aA~~l~~DPAr----PL~tl~---L~Gi~~p~~~~r~~~~ern~LL~~Gist~~V~~G~-V~ 361 (498) T protein:vir:44 293 ---TQTPADELAASRTARAAVFIRNDPAR----PTQTGE---LVDMLPAPKGKRFTTTEQQTLLSHGVATAYVESGV-LR 361 (498) T ss_pred ---CCCHHHHHHHHHHHHHHHHhhccccc----ccCcee---ecccccCCchhcCChHHHHHHHhcCcceEEEcCCe-EE Confidence 01122 234444444 344322 112233 33444 4456689999999999999999765443 44 Q ss_pred EEcceec-----C-CCccccceeehhhHHHHHHHHHHHHHHH-HhhCC----CCH-------HHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 540 LMGDKTA-----T-TVPSPFDRINVRRLFNMLKKNIGDSSKY-KLFEN----NDN-------FTRASFRMEVSQYLSTIR 601 (666) Q Consensus 540 ~wG~rT~-----~-~~~~~~~~i~vrR~~~~i~~~~~~~~~~-~v~ep----n~~-------~~~~~i~~~i~~~l~~l~ 601 (666) +-=..|. . ..|..|..|...|+.+|+.+.++..... |--+. +++ .+-..||..+-.-+++|. T Consensus 362 I~R~ITTY~~n~~G~~D~syLDi~T~~tl~yvr~~~r~~i~~kfpR~KLa~d~~~~~~gq~IvTp~~ir~eli~~y~~le 441 (498) T protein:vir:44 362 IQRDITTYRKNAYGVADNSYLDSETLHTSAYVLRRLKSVITSKYGRHKLANDGTRFGSGQAIVTPAVIRGELGSTYRQME 441 (498) T ss_pred EEeeeeeeeecCCCCcchhhhhhhhHHHHHHHHHHHHHHhhhhcCCcccccCCcccCCCcccccHHHHHHHHHHHHHhhh Confidence 4444443 1 2345799999999999999999988743 21122 111 366789999999999999 Q ss_pred hcCCeeee---E--EEEcccCCCHHHhhCCEEEEEEEEEecCCccEEEEEEEEeecchhHHHHHHHHhcC Q lcl|Aclame:pro 602 SLGGIYDF---R--VQCDTTNNTPDVIDRNEFVASMFIKPAKSINYIMLNFTAVATGSDFDEIIGPVNQA 666 (666) Q Consensus 602 ~~gal~g~---~--v~~d~~~n~~~~i~~G~~~~~i~~~p~~p~e~i~~~~~~~~~~~~~~e~~~~~~~~ 666 (666) .+|.+..+ + +.|...-+ +..|+.+.+-...+-+.+-+ +...+++-+.+++ T Consensus 442 ~~givEn~~~~~~~LiVerd~~-----dpnRln~~~p~d~vn~L~V~----------A~~~~f~lq~~~~ 496 (498) T protein:vir:44 442 REGIVENFDLFQQHLIVERNAN-----DSNRLDVLFPPDYVNQLRVF----------AVLNQFRLQYSEE 496 (498) T ss_pred hhccccChhhhcceeEEEECCC-----CCcEEEEEecccccCchhhh----------hhhhhhhhhhhhh Confidence 99999874 2 34432211 23556555533333333222 1122222223333 No 53 >protein:vir:276 Length: 369 # NCBI annotation: putative tail sheath protein # Family: family:all:669 # MgeID: mge:7 # MgeName: K139 # Cross-refs: genbank:acc:NP_536656;genbank:gi:17975134;genbank:GeneID:929090 Probab=98.96 E-value=2.1e-09 Score=68.11 Aligned_cols=345 Identities=12% Similarity=0.061 Sum_probs=184.1 Q ss_pred cccceeeecc----cccc--cceeeecc-------cccccccccchhhhHhHhcccCceEEEEeccccccccceeeeecC Q lcl|Aclame:pro 274 DNQYAFIVRR----DGVV--VESYVLST-------LKGDKDVYGNSIYMDDFFGRGSSQYIYATAQGWVDGFSGIISLAG 340 (666) Q Consensus 274 ~~~~~~~v~~----~g~~--~et~~ls~-------~~~~~~~~~~~~~~~~~~~~~~s~~i~~~~~~~~~~~~~~~~~~~ 340 (666) -...++.+.. .|.+ +|.+.|-- ..+.........+.+..+....+.+-.- -....+.+ T Consensus 1 m~~~~V~in~~n~~qg~~~~ver~~lfig~g~~~~~~g~~~~~~~~sdld~~lg~~ds~lk~~---------v~aa~~na 71 (369) T protein:vir:27 1 MAWPTVIIKILNLMNGPIADIECHFLFVIRGTVSGEVRNLIMVDSTSDLDDVLAEASAEGLAI---------VKAAQLNG 71 (369) T ss_pred CCCCceEEecccccCCCcccccceEEEEEeccccccccceEEecCccchHhhcCCcChhHHHH---------HHHHHhCC Confidence 0011112111 1111 23333211 1122222233333444433222221000 00011112 Q ss_pred cccccccccccccccccccchhhhhhhhhcchhhcCccEEecccCCCchhHHHHHHHHHHHhhcc-ccEEEEEcCCcccc Q lcl|Aclame:pro 341 GVSANEATTGGVGADPFIGAMMQGWGLFAERESIHVNLLIAGACAGEGDAFSTVQKHAVSIGDER-QDCLVMVSPPRSTV 419 (666) Q Consensus 341 g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ll~~p~~~~~~~~~~~v~~~~~~~~~~~-~~~~~~~d~~~~~~ 419 (666) |.+...... ......++.++.. ...+...+-.+.+-+.+.+.....+++.....+..++ |-.|+++..+... T Consensus 72 G~~w~a~~~----p~~~~~~~~~Av~--~a~~~~s~E~V~v~~p~t~~a~i~aaq~~a~el~~~~~R~vffi~e~~~~~- 144 (369) T protein:vir:27 72 KQAWTAGVM----ILSEEDNWQDAVK--KANEVSSFEFVVLGFDAETKAMIEDAITLRTELKNSLGREVGVLCQLPAIN- 144 (369) T ss_pred CCceEEEEE----EeCCchhHHHHHH--hhhhhCCccEEEEecCcccHHHHHHHHHHHHHHHHhcCCeEEEEEeccccC- Confidence 222111110 0011122222221 1223444555555554433344456666666666653 6677777644211 Q ss_pred ccccccCCHHHHHHHHhhccccchhhcccCcceEEEEcCeEEEecCcCCceeEechHHHHHHHHHhhhhcCCceecccce Q lcl|Aclame:pro 420 VNIPVTTAIDNLIAWREGSGNYNENNMNINTTYAVIDGNYKYQYDKYNDVNRWVPLAADIAGLCARTDAVSQPWMSPAGY 499 (666) Q Consensus 420 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~p~~~~~d~~~~~~~~~p~s~~~ag~~a~~d~~~g~~~span~ 499 (666) -+...+.+ ..+|...+. ..+..+.+.+..++.-+.... .-.|.+||+++.. ..-+..||.-. T Consensus 145 ~~~~~~e~---w~dy~a~l~---al~~g~a~~~V~vv~~~~~~g----------n~~G~~aGRl~n~--aVsIadsp~RV 206 (369) T protein:vir:27 145 NDPTNGQT---WSEWLADTV---DIPKDVASEYISVVPNVHAAG----------DTLGKYAGRLANK--EVSIADSPARV 206 (369) T ss_pred CCccccCC---HHHHHHHHH---HHhhccCcccceeeeeecccc----------chHHHHHHHHHhc--ccchhcCccee Confidence 01111222 333333222 223346677777763322211 2367788888642 22367788777 Q ss_pred ecceeeeeeeee-----ecCChhHHhhhhhccceEEEEecC-CeEEEEcceecCCCccccceeehhhHHHHHHHHHHHHH Q lcl|Aclame:pro 500 NRGQIMNVVKLA-----IEPRKAHRDRLYQAAINPVIGAGG-EGFILMGDKTATTVPSPFDRINVRRLFNMLKKNIGDSS 573 (666) Q Consensus 500 ~~~~i~g~~~~~-----~~~~~~~~~~Ln~~gIn~i~~~~g-~G~~~wG~rT~~~~~~~~~~i~vrR~~~~i~~~~~~~~ 573 (666) ..+.+.|...+. ..++.+.+..|..+|..+.+.++| .|+.+-++||+....+++++|..+|..+-+.|.++..+ T Consensus 207 ktG~l~g~~~~p~d~~g~~l~~a~l~aLd~agysvp~~Y~gy~G~Yw~d~~tl~~~gsDYq~iE~~RVvdKa~R~vR~~A 286 (369) T protein:vir:27 207 QTGSVLGNTELMKDKAGKALDLATLKALESNRIAVPMWYPDYPGQYWTTGRTLDVPGGDYQDIRHIRVAMKAARKVRIRA 286 (369) T ss_pred eecccccccccccCCCCcccCHHHHHHHHhCCCeEEEeeCCCCceEEeCceEeccCCCCeehhhhhhHHHHHHHHHHHHH Confidence 666566644332 236678889999999999999998 48989899999988899999999999999999998877 Q ss_pred HHHhhCCC---CHHHHHHHHHHHHHHHHHHHhcCCeeeeEEEEcccC-CCHHHhhCCEEEEEEEEEecCCccEEEEEEEE Q lcl|Aclame:pro 574 KYKLFENN---DNFTRASFRMEVSQYLSTIRSLGGIYDFRVQCDTTN-NTPDVIDRNEFVASMFIKPAKSINYIMLNFTA 649 (666) Q Consensus 574 ~~~v~epn---~~~~~~~i~~~i~~~l~~l~~~gal~g~~v~~d~~~-n~~~~i~~G~~~~~i~~~p~~p~e~i~~~~~~ 649 (666) -..+..|- ++.-.+..+..+..=|+.|.+.. ..++|.-.++. =+..-....++.|.+.++|.--...|+.+|.- T Consensus 287 i~~i~Dr~lnstp~sia~~~~~~~~pLr~M~ks~--fpgei~~P~d~dI~i~w~~k~~V~I~~~vrP~~~pk~it~~I~l 364 (369) T protein:vir:27 287 IARIADRTLNSTPQSIAAAKLYFTQDLRTMALTG--VPGEIYPPEDEDIQIKWVNSTDVEIYMSVQPYECPVKITIAISV 364 (369) T ss_pred HHHhcCcccccChhHHHHHHHHHhhHHHHHHhhc--CCeEEecCCCCceEEEeeccceEEEEEEEeeccCCceEEEEEEE Confidence 66665543 56666777777888888887653 33344433211 01111255678888889999989999988877 Q ss_pred eecch Q lcl|Aclame:pro 650 VATGS 654 (666) Q Consensus 650 ~~~~~ 654 (666) .-..- T Consensus 365 dl~~~ 369 (369) T protein:vir:27 365 KQGDY 369 (369) T ss_pred eccCC Confidence 66554 No 54 >protein:vir:3751 Length: 376 # NCBI annotation: orf23 # Family: family:all:669 # MgeID: mge:79 # MgeName: HP1 # Cross-refs: genbank:acc:NP_043492;genbank:gi:9628627;genbank:GeneID:1261129 Probab=98.86 E-value=7.7e-09 Score=65.08 Aligned_cols=358 Identities=9% Similarity=0.014 Sum_probs=181.6 Q ss_pred ccccceeeeeeccccccccccccccccccccccceeeeeeccCcCcccceeeecccccccceeeecccccccccccchhh Q lcl|Aclame:pro 229 EIGNSLEVEILARSAFKNTAPDLTMYPYGGERTAARNLIPYAPQNDNQYAFIVRRDGVVVESYVLSTLKGDKDVYGNSIY 308 (666) Q Consensus 229 ~~gn~i~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~et~~ls~~~~~~~~~~~~~~ 308 (666) -|+ +|.+..-.. .+........+.-++..+... ...+...+..+- +...-+..+. ..-.. T Consensus 1 ~~~---~v~vn~ln~---------~qg~~~~ver~~lfig~~~~~--~~~~~~~~~~sd-----ld~~lg~~ds-~lk~~ 60 (376) T protein:vir:37 1 MFP---SVQINALNQ---------LSGETKEIERHALFVGVGTTN--QGKLLALTPDSD-----FDKVFGETDT-DLKKQ 60 (376) T ss_pred CCC---eEEEeeeec---------cCCCcccccceEEEeeccccc--cCceEEecCCCC-----hHHhhCCCch-hHHHH Confidence 221 111111000 000001111111111111110 000000000000 0000000000 00011 Q ss_pred hHhHhcccCceEEEEeccccccccceeeeecCcccccccccccccccccccchhhhhhhhhcchhhcCccEEecccC-CC Q lcl|Aclame:pro 309 MDDFFGRGSSQYIYATAQGWVDGFSGIISLAGGVSANEATTGGVGADPFIGAMMQGWGLFAERESIHVNLLIAGACA-GE 387 (666) Q Consensus 309 ~~~~~~~~~s~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ll~~p~~~-~~ 387 (666) +.+...+.+..+...... . . ....+..++.. ...+...+-.+.+-+.+ .+ T Consensus 61 v~aa~~naG~~w~a~~~~-----------p-----------~-----~~~~~~~~Av~--~a~~~~s~E~V~v~~p~~t~ 111 (376) T protein:vir:37 61 VRAAMLNAGQNWFAHVYI-----------A-----------Q-----EDGYDFVECVK--KANQTASFEYCVNTRYLGVD 111 (376) T ss_pred HHHHHhCCCCceEEEEEe-----------c-----------C-----CChhhHHHHHH--HHHhhCCeeEEEEecCcchh Confidence 222222323222111100 0 0 00011222221 12333445455554432 22 Q ss_pred chhHHHHHHHHHHHhhc-cccEEEEEcCCccccccccccCCHHHHHHHHhhccccchhhcccCcceEEEEcCeEEEecCc Q lcl|Aclame:pro 388 GDAFSTVQKHAVSIGDE-RQDCLVMVSPPRSTVVNIPVTTAIDNLIAWREGSGNYNENNMNINTTYAVIDGNYKYQYDKY 466 (666) Q Consensus 388 ~~~~~~v~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~p~~~~~d~~ 466 (666) .....+++.....+..+ +|-.|+++..+... .+...+.+ ..+|...+. ..+..+.+.+..++.. +. T Consensus 112 ~a~i~a~qa~a~el~~~~~R~vffile~~g~d-~~~~~ge~---w~~y~~~l~---a~~~gia~~~V~vV~~-~~----- 178 (376) T protein:vir:37 112 KASIGKLQECYAELLAKFGRRTFFIQAVQGIN-HDQSDGET---WDQYVQKLT---TLQQTIVADHVCLVPL-LF----- 178 (376) T ss_pred HHHHHHHHHHHHHHHHhcCCeEEEEEeccCCC-CcccccCC---HHHHHHHHH---HHhccccccceeeeee-ec----- Confidence 33344555555566555 36677777765321 01111223 333333322 2234556667666532 11 Q ss_pred CCceeEechHHHHHHHHHhhhhcCCceecccceecceeeeeeeee-------ecCChhHHhhhhhccceEEEEecC-CeE Q lcl|Aclame:pro 467 NDVNRWVPLAADIAGLCARTDAVSQPWMSPAGYNRGQIMNVVKLA-------IEPRKAHRDRLYQAAINPVIGAGG-EGF 538 (666) Q Consensus 467 ~~~~~~~p~s~~~ag~~a~~d~~~g~~~span~~~~~i~g~~~~~-------~~~~~~~~~~Ln~~gIn~i~~~~g-~G~ 538 (666) + ...|.+||+++. +..-++.||.-..-+.|.|....+ ..++....+.|..+|..+.+.++| .|+ T Consensus 179 -g-----n~~G~~aGRl~n--aaVsVadspgRV~tGai~gl~~~~~p~d~~g~el~~a~l~aLd~arysvpr~Y~gydG~ 250 (376) T protein:vir:37 179 -G-----NETGVLAGRLAN--RAVTVADSPARVQTGALVSLGSANKPLDKDGNELTLAHLKSLETARYSVPMWYPDYDGY 250 (376) T ss_pred -c-----chHHHHHHHHHh--CCcchhcCccceeecccccccccccccccCCcccchHHHHHHHhCCCeEEEeeCCCCce Confidence 0 136888898875 233368899887766666654332 235678889999999999999998 489 Q ss_pred EEEcceecCCCccccceeehhhHHHHHHHHHHHHHHHHhhCC---CCHHHHHHHHHHHHHHHHHHHhcCCeeeeE----E Q lcl|Aclame:pro 539 ILMGDKTATTVPSPFDRINVRRLFNMLKKNIGDSSKYKLFEN---NDNFTRASFRMEVSQYLSTIRSLGGIYDFR----V 611 (666) Q Consensus 539 ~~wG~rT~~~~~~~~~~i~vrR~~~~i~~~~~~~~~~~v~ep---n~~~~~~~i~~~i~~~l~~l~~~gal~g~~----v 611 (666) .+-++||+....+++++|..+|.++.+.|.++..+-..+..+ .++.-.+..+..+..=|+.|.+.+-|.|.. | T Consensus 251 Yw~dg~tl~~~gsDYq~ie~~RVvdKa~R~vR~~Ai~~i~Dr~lnstp~sia~~~~~~~~pLr~M~ks~ei~g~~fpgei 330 (376) T protein:vir:37 251 YRADGRTLDVEGGDYQVIENLRVVDKVARKVRLLAIGKIADRSFNSTTSSTEYHKNYFAKPLRDMSKSATINGKDFPGEC 330 (376) T ss_pred EEeCCeEeccCCCCeeeehhchHHHHHHHHHHHHHHHHhcCccccCChhHHHHHHHHHhHHHHHHHhhhhhcccccccee Confidence 999999999888999999999999999999887776555443 367778888999999999999999999843 4 Q ss_pred EEcccC-CCHHHhhCCEEEEEEEEEecCCccEEEEEEEEeecchhHHH Q lcl|Aclame:pro 612 QCDTTN-NTPDVIDRNEFVASMFIKPAKSINYIMLNFTAVATGSDFDE 658 (666) Q Consensus 612 ~~d~~~-n~~~~i~~G~~~~~i~~~p~~p~e~i~~~~~~~~~~~~~~e 658 (666) +..++- =+..-....++.+.+.++|.--.+.|+..|--.-. ...| T Consensus 331 ~~P~d~dI~i~w~sk~~V~I~~~vrPy~cpk~i~~~I~LDls--~~~~ 376 (376) T protein:vir:37 331 MPPKDDAITIVWQSKTKVTIYIKVRPYDCPKEITANIFLDLD--SLGE 376 (376) T ss_pred ecCCCCceEEEeccCceEEEEEEEeeecCcceeEEEEEEecC--CCCC Confidence 443211 01111235678888888898778888777654433 2223 No 55 >protein:vir:3788 Length: 376 # NCBI annotation: tail sheath # Family: family:all:669 # MgeID: mge:328 # MgeName: HP2 # Cross-refs: genbank:acc:NP_536828;genbank:gi:17981837;genbank:GeneID:929216 Probab=98.85 E-value=8.8e-09 Score=64.75 Aligned_cols=358 Identities=10% Similarity=0.026 Sum_probs=176.7 Q ss_pred ccccceeeeeeccccccccccccccccccccccceeeeeeccCcCcccceeeecccccccceeeecccccccccccchhh Q lcl|Aclame:pro 229 EIGNSLEVEILARSAFKNTAPDLTMYPYGGERTAARNLIPYAPQNDNQYAFIVRRDGVVVESYVLSTLKGDKDVYGNSIY 308 (666) Q Consensus 229 ~~gn~i~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~et~~ls~~~~~~~~~~~~~~ 308 (666) -|+ +|.+..-.. .+........|.-++..+... ...+...+..+-++. .-+..+. ..-.. T Consensus 1 ~~~---~v~vn~~n~---------~~g~~~~~er~~Lfig~~~~~--~~~~~~~~~~sdld~-----~lg~~~~-~lk~~ 60 (376) T protein:vir:37 1 MFP---SVQINALNQ---------LSGETKEIERHALFVGVGTTN--QGKLLALTPDSDFDK-----VFGETDT-DLKKQ 60 (376) T ss_pred CCC---eEEEecccc---------cCCCcccccceEEeecccccc--ccceeeecCccchHh-----hhCCCch-HHHHH Confidence 221 111111000 000001111111111111110 000000000000000 0000000 00011 Q ss_pred hHhHhcccCceEEEEeccccccccceeeeecCcccccccccccccccccccchhhhhhhhhcchhhcCccEEecccC-CC Q lcl|Aclame:pro 309 MDDFFGRGSSQYIYATAQGWVDGFSGIISLAGGVSANEATTGGVGADPFIGAMMQGWGLFAERESIHVNLLIAGACA-GE 387 (666) Q Consensus 309 ~~~~~~~~~s~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ll~~p~~~-~~ 387 (666) +.+...+.+..+...... +. ....++.++... ..+...+-.+.+-+.+ .+ T Consensus 61 v~aa~~naG~~~~~~~~~-----------~~----------------~~~~~~~~Av~~--a~~~~s~E~V~v~~pv~t~ 111 (376) T protein:vir:37 61 VRAAMLNAGQNWFAHVYI-----------AQ----------------EDGYDFVECVKK--ANQTASFEYCVNTRYLGVD 111 (376) T ss_pred HHHHHhCCCCcEEEEEEe-----------ec----------------CCchHHHHHHHH--hhhhcCceEEEEecccccc Confidence 222222333322111100 00 000111111111 1223334444443332 23 Q ss_pred chhHHHHHHHHHHHhhc-cccEEEEEcCCccccccccccCCHHHHHHHHhhccccchhhcccCcceEEEEcCeEEEecCc Q lcl|Aclame:pro 388 GDAFSTVQKHAVSIGDE-RQDCLVMVSPPRSTVVNIPVTTAIDNLIAWREGSGNYNENNMNINTTYAVIDGNYKYQYDKY 466 (666) Q Consensus 388 ~~~~~~v~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~p~~~~~d~~ 466 (666) .....+++.....+..+ +|-.++++..+... .+...+.+.+ +|..... ..+..+.+.+..++. .+. T Consensus 112 ~a~i~aa~~~a~el~~~~~Rpv~file~r~~~-~~~~~~e~w~---~y~~~~~---al~~gia~~~V~~V~-~~~----- 178 (376) T protein:vir:37 112 KASIGKLQECYAELLAKFGRRTFFIQAVQGIN-HDQSDGETWD---QYVQKLT---TLQQTIVADHVCLVP-LLF----- 178 (376) T ss_pred HHHHHHHHHHHHHHHHhcCCeEEEEEeccCcC-cccccccCHH---HHHHHHH---Hhhcccccccceeee-eeh----- Confidence 34455666666666555 57778887765321 1111222333 3332221 122334445544321 110 Q ss_pred CCceeEechHHHHHHHHHhhhhcCCceecccceecceeeeeeeee-------ecCChhHHhhhhhccceEEEEecC-CeE Q lcl|Aclame:pro 467 NDVNRWVPLAADIAGLCARTDAVSQPWMSPAGYNRGQIMNVVKLA-------IEPRKAHRDRLYQAAINPVIGAGG-EGF 538 (666) Q Consensus 467 ~~~~~~~p~s~~~ag~~a~~d~~~g~~~span~~~~~i~g~~~~~-------~~~~~~~~~~Ln~~gIn~i~~~~g-~G~ 538 (666) + ...|.+||++++. ..-++.||.-...+.|.|....+ ..++...++.|..+|..+.+.++| .|+ T Consensus 179 -g-----n~~G~~aGRl~~a--aVsVadspgRV~tG~l~gl~~~~lp~d~~~~~l~~a~l~aLd~agy~vp~~Y~gy~G~ 250 (376) T protein:vir:37 179 -G-----NETGVLAGRLANR--AVTVADSPARVQTGALVSLGSANKPLDKDRNELTLAHLKSLETARYSVPMWYPDYDGY 250 (376) T ss_pred -h-----hhHHHHHHHHhhc--ccchhhCccceeccccccccccccccCcCcccCCHHHHHHHHhCCCeEEEeeCCCCce Confidence 0 1367888887643 22367788877666665553322 346788999999999999999998 489 Q ss_pred EEEcceecCCCccccceeehhhHHHHHHHHHHHHHHHHhhCCC---CHHHHHHHHHHHHHHHHHHHhcCCeee----eEE Q lcl|Aclame:pro 539 ILMGDKTATTVPSPFDRINVRRLFNMLKKNIGDSSKYKLFENN---DNFTRASFRMEVSQYLSTIRSLGGIYD----FRV 611 (666) Q Consensus 539 ~~wG~rT~~~~~~~~~~i~vrR~~~~i~~~~~~~~~~~v~epn---~~~~~~~i~~~i~~~l~~l~~~gal~g----~~v 611 (666) .+-++||+....+++++|..+|..+-+.|.++..+-.++...- ++.-.+..+.-+..=|+.|.+..-+.| .+| T Consensus 251 Y~~d~~tl~~~gsDY~~ie~~RVvdKa~R~vR~~ai~~i~D~~lnst~~sia~~~~yi~~pLr~M~~s~~i~g~~fpGeI 330 (376) T protein:vir:37 251 YWADGRTLDVEGGDYQVIENLRVVDKVARKVRLLAIGKIADRSFNSTTSSTEYHKNYFAKPLRDMSKSATINGKDFPGEC 330 (376) T ss_pred EEeCceEeccCCCChhhhhhhhHHHHHHHHHHHHHHHHhCCcccCcchhhHHHHHHHHHHHHHHHHhcchhcccccccee Confidence 9999999988889999999999999999999887766655422 344455666667777899988888877 245 Q ss_pred EEcccCC-CHHHhhCCEEEEEEEEEecCCccEEEEEEEEeecchhHHH Q lcl|Aclame:pro 612 QCDTTNN-TPDVIDRNEFVASMFIKPAKSINYIMLNFTAVATGSDFDE 658 (666) Q Consensus 612 ~~d~~~n-~~~~i~~G~~~~~i~~~p~~p~e~i~~~~~~~~~~~~~~e 658 (666) ...++.+ ++..+...++.+.+.+.|.--..+|+..|.-.-. ...| T Consensus 331 ~~p~d~Di~i~w~s~~~V~I~~~v~P~~~pk~Itv~I~Ldls--n~~~ 376 (376) T protein:vir:37 331 MPPKDDAITIVWQSKTKVTIYIKVRPYDCPKEITANIFLDLD--SLGE 376 (376) T ss_pred ecCCCCCceEEeeccceEEEEEEEEeccCCceEEEEEEeecC--CCCC Confidence 5543321 2333478889999999999999999866433222 1111 No 56 >protein:vir:95263 Length: 450 # NCBI annotation: Phage conserved protein # Family: family:all:396 # MgeID: mge:1561 # MgeName: Felix 01 # Cross-refs: genbank:acc:NP_944896;genbank:gi:38707836;genbank:GeneID:2744049 Probab=98.84 E-value=2.8e-08 Score=61.95 Aligned_cols=433 Identities=11% Similarity=-0.023 Sum_probs=164.6 Q ss_pred cccceeEEEeecccccceeeeeeeeeccceeeeeeccchhhccccceeeeeecccceeeeeeccccccccceeeeeeccc Q lcl|Aclame:pro 163 LDGDWTAEFTSSSGNGSAALSVTKIVTDSGLLLTDLETSRANITNQTFLTKLQKYDMPAVSAIYAGEIGNSLEVEILARS 242 (666) Q Consensus 163 ~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~A~~~g~~gn~i~v~v~~~~ 242 (666) ... .++........... .....+...+........ +.......... .+..-|.....+.. ... T Consensus 1 ~~s----~iVnV~i~~~~~a~--~~~~f~~~l~~~~~~~~~---~r~~~yss~~~-----V~~~FG~~S~ey~a---A~~ 63 (450) T protein:vir:95 1 MWN----PIVNVDITLNTAGT--TREGFGLPLFLASTDNFE---ERVRGYTSLTE-----VAEDFDENTAAYKA---AKQ 63 (450) T ss_pred CCC----ceEEEeeccccccc--ccccceeEEEEcCCCCCc---cceeeecCHHH-----HHHhcCCCcHHHHH---HHH Confidence 000 00000000000000 000000001100000000 00000000000 00000000000000 000 Q ss_pred cccccccccccccccccccceeeeeeccCcCcccceeeecccccccce--eeecccccccccccchhhhHhHhcccCceE Q lcl|Aclame:pro 243 AFKNTAPDLTMYPYGGERTAARNLIPYAPQNDNQYAFIVRRDGVVVES--YVLSTLKGDKDVYGNSIYMDDFFGRGSSQY 320 (666) Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~et--~~ls~~~~~~~~~~~~~~~~~~~~~~~s~~ 320 (666) .|. ..+.|.....+--...................+.+..+|..... ..++...... .....+...+....... T Consensus 64 yF~-q~p~p~~l~igr~~~~~t~~~~~~~~~~~~g~lt~tv~G~~~~~~~i~~s~a~s~~---~va~~~~tai~~~~~~~ 139 (450) T protein:vir:95 64 LWS-QTPKVTQLYIGRRAMQYTVSIPDAVTESTDYSITVAAGGGISQPYQYTAQSSDTAE---NVLQQFKTQIEADPTIK 139 (450) T ss_pred HHh-CCCcccEEEEEeeccchhhhhhhhhccccceeEEEEecceeeeeeEEEEEecCChh---hHHHHhhhhhcccceee Confidence 000 00001000000000000000000000111122222233332211 1222111110 00111111111110000 Q ss_pred EEEeccccccccceeeeecCcccc-ccccccccccccccc--chhhhhhhhhcchh-hcCccEEecccCCCchhHHHHHH Q lcl|Aclame:pro 321 IYATAQGWVDGFSGIISLAGGVSA-NEATTGGVGADPFIG--AMMQGWGLFAERES-IHVNLLIAGACAGEGDAFSTVQK 396 (666) Q Consensus 321 i~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~--~~~~~~~l~~~~~~-~~~~ll~~p~~~~~~~~~~~v~~ 396 (666) -...................+... ....+...+.....+ .......+.++... .+--.++.+.. ...-.. T Consensus 140 ~~~~~~s~g~~~~~t~~~~~~~~~~~~~l~~~~~~~~~~g~~aet~~~a~~a~~~~~~~w~~~~~~~~------~~~~i~ 213 (450) T protein:vir:95 140 DKVSVNVTGSNGSATMIIAKAGDNDFVKVTTTAQTVYIASTTADTASTALAAIEAYSTDWYFIAAEDR------TQQFVL 213 (450) T ss_pred eeeeeeeecccceeeeeeeccccchhhccccccceeEecccccccHHHHHHHHHHhhCCeEEEEecCC------CHHHHH Confidence 000000000000001111100000 000000000000000 00000011111111 01112222221 111223 Q ss_pred HHHHHhhccccEEEEEcCCccccccccccCCHHHHHHHHhhccccchhhcccCcceE-EEEcCeEEEecCcCCceeEech Q lcl|Aclame:pro 397 HAVSIGDERQDCLVMVSPPRSTVVNIPVTTAIDNLIAWREGSGNYNENNMNINTTYA-VIDGNYKYQYDKYNDVNRWVPL 475 (666) Q Consensus 397 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~-~~~~p~~~~~d~~~~~~~~~p~ 475 (666) ++..+++....+|.....-.......... ...++....+.. +..|. .+|++ .+. .-.+ T Consensus 214 a~a~w~~a~~~~f~~~~~~~~~~~~~~~~-~~~~i~~~l~~~----------~~~~t~~~y~~-------~~~---~~~~ 272 (450) T protein:vir:95 214 AMASEIQARKKIFFTANSDVTALQGTELA-SANDVPAQLAKN----------MYTRTVCLWHH-------AAA---EDYP 272 (450) T ss_pred HHHHHHhhcCcEEEEEcCCchhhhhhhhh-cccchHHHHHhc----------cCCeeEEEeeC-------CCc---hhHH Confidence 44455554444444332211100000000 000011100000 11122 22221 111 1124 Q ss_pred HHHHHHHHHhhhhcCCceecccceecceeeeee--eeeecCChhHHhhhhhccceEEEEecCCeEEEEcceecCCCcccc Q lcl|Aclame:pro 476 AADIAGLCARTDAVSQPWMSPAGYNRGQIMNVV--KLAIEPRKAHRDRLYQAAINPVIGAGGEGFILMGDKTATTVPSPF 553 (666) Q Consensus 476 s~~~ag~~a~~d~~~g~~~span~~~~~i~g~~--~~~~~~~~~~~~~Ln~~gIn~i~~~~g~G~~~wG~rT~~~~~~~~ 553 (666) .+.++|.....+.-+=-|+ +|.+.||..-+ .....++..|.+.|..+++|++.++.+.+ .++.++|+.+ T Consensus 273 ~aa~~g~~~~~~~g~~T~~---fk~l~Gv~~~v~~~~~~~lt~~~~~al~~~~~n~y~~~~~~~-~~~~G~~~~G----- 343 (450) T protein:vir:95 273 EMAYIAYGAPYDAGSIAWG---NAQLTGVAASLQPSNQRPLTSIQKSALDVRHCNFIDLDGGVP-VVRRGITSGG----- 343 (450) T ss_pred HHHHHHHhhhcccceeeec---cccccceeeeccCccccccchHHHHHHHhCCcEEEEEecCce-eeeCCeeeCc----- Confidence 5556665554433222333 66555544211 12346899999999999999999987764 4778888775 Q ss_pred ceeehhhHHHHHHHHHHHHHHHHhh------CCCCHHHHHHHHHHHHHHHHHHHhcCCeeeeEEEEcc-cCCCHHHhhCC Q lcl|Aclame:pro 554 DRINVRRLFNMLKKNIGDSSKYKLF------ENNDNFTRASFRMEVSQYLSTIRSLGGIYDFRVQCDT-TNNTPDVIDRN 626 (666) Q Consensus 554 ~~i~vrR~~~~i~~~~~~~~~~~v~------epn~~~~~~~i~~~i~~~l~~l~~~gal~g~~v~~d~-~~n~~~~i~~G 626 (666) .||-++|-.+|++..|++.+....- =|-|+.-...|+..|+.-|++..++|.|.||.|.+.+ +..++.|+.++ T Consensus 344 ~~iD~~~~~~wl~~~iq~~l~~ll~~~~~~KiPy~~~G~~~i~a~i~~~l~~a~~~G~Ia~~~V~~~~~~~~~~~dr~~R 423 (450) T protein:vir:95 344 EWIDIIRGVDWLESDLKTSLRDLLINQKGGKITYDDTGITRIRQVIETSLQRAVNRNFLSSYTVNVPKASQVALADKKAR 423 (450) T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccChhhHHHHHHHHHHHHHHHHhcCcccceeEecCChHhcCHHHHhcc Confidence 2678999999999999999987652 2678888889999999999999999999999999884 77899999988 Q ss_pred EEE-EEEEEEecCCccEEEEEEEEeec Q lcl|Aclame:pro 627 EFV-ASMFIKPAKSINYIMLNFTAVAT 652 (666) Q Consensus 627 ~~~-~~i~~~p~~p~e~i~~~~~~~~~ 652 (666) ++. +.+.++....++.+.|++.-+=. T Consensus 424 ~~~~i~~~~~laGAIh~~~i~~~v~~~ 450 (450) T protein:vir:95 424 ILKDVTFAGILAGAILDVDLKGTVAYE 450 (450) T ss_pred CCCCeeEEEEEccceEEEEEEEEEEeC Confidence 874 88889999999999998776654 No 57 >protein:vir:78782 Length: 370 # NCBI annotation: putative tail sheath protein # Family: family:all:669 # MgeID: mge:1857 # MgeName: phiO18P # Cross-refs: genbank:acc:YP_001285652;genbank:gi:148727158;genbank:GeneID:5220132 Probab=98.81 E-value=4.2e-09 Score=66.50 Aligned_cols=349 Identities=10% Similarity=-0.003 Sum_probs=169.8 Q ss_pred ccccceeeeeeccccccccccccccccccccc--cceeeeeeccCcCcccceeeecccccccceeeecccccccccccch Q lcl|Aclame:pro 229 EIGNSLEVEILARSAFKNTAPDLTMYPYGGER--TAARNLIPYAPQNDNQYAFIVRRDGVVVESYVLSTLKGDKDVYGNS 306 (666) Q Consensus 229 ~~gn~i~v~v~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~v~~~g~~~et~~ls~~~~~~~~~~~~ 306 (666) -|+ +|.+..-.. ..+..+ ..+.-++..+.. +...+...+..+-++. .-+..+.. .- T Consensus 1 ~~~---~v~vn~~n~-----------~~g~~~~~er~~lfig~~~~--~~g~~~~~~~~sdld~-----~l~~~ds~-lk 58 (370) T protein:vir:78 1 MWP---YVQIYNLNQ-----------MQGPVTEVERHLLFIGSAAS--NTGKLLSLNAQSDFDQ-----LLGAADSE-LK 58 (370) T ss_pred CCc---eEEEeeccc-----------cCCCcCccceeEEEEecccc--cccceEeecCccCHHH-----hcCCcChh-HH Confidence 221 111111000 001111 111111111110 1001100000000000 00000000 00 Q ss_pred hhhHhHhcccCceEEEEeccccccccceeeeecCcccccccccccccccccccchhhhhhhhhcchhhcCccEEecccCC Q lcl|Aclame:pro 307 IYMDDFFGRGSSQYIYATAQGWVDGFSGIISLAGGVSANEATTGGVGADPFIGAMMQGWGLFAERESIHVNLLIAGACAG 386 (666) Q Consensus 307 ~~~~~~~~~~~s~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ll~~p~~~~ 386 (666) ..+.....+.+..+... +.++.. ..+..++. ....+...+-.+.+-+... T Consensus 59 ~~v~aa~~naG~~~~~~-----------~~p~~~-----------------~~d~~~Av--~~a~~~~s~E~V~v~~~~s 108 (370) T protein:vir:78 59 ANLLAARDNAGQNWSAA-----------AYVLPT-----------------DKPWLDAA--RDAQQTQSFEGVVVLGQEW 108 (370) T ss_pred HHHHHHHhCCCCceEEE-----------EEEecC-----------------chhHHHHH--HHHHhhCCccEEEEecCcc Confidence 11222222333222111 111110 11122221 1122334455555555433 Q ss_pred CchhHHHHHHHHHHHhhcc-ccEEEEEcCCccccccccccCCHHHHHHHHhhccccchhhcccCcceEEEEcCeEEEecC Q lcl|Aclame:pro 387 EGDAFSTVQKHAVSIGDER-QDCLVMVSPPRSTVVNIPVTTAIDNLIAWREGSGNYNENNMNINTTYAVIDGNYKYQYDK 465 (666) Q Consensus 387 ~~~~~~~v~~~~~~~~~~~-~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~p~~~~~d~ 465 (666) +.....+++.....+..++ |-.++++..+... .+.+ ..+|...+. ..+..+.+.+..++.-|.. T Consensus 109 ~~a~~~a~~~~a~el~n~~~Rpv~file~~~~~-----~~e~---w~~y~~~l~---al~~gia~~~V~vvp~~~g---- 173 (370) T protein:vir:78 109 HQAAINAAHALNQELIAKWGRWQFMLLAVPAIA-----DEQD---WATYEAELA---TLQDGIAASSVSLIPQLWP---- 173 (370) T ss_pred hHHHHHHHHHHHHHHHHhcCCeEEEEEeecCCC-----CcCC---HHHHHHHHH---HhhhccccccceEEeeecc---- Confidence 3344556666666666655 5677777665321 1223 333332221 1223455566666533311 Q ss_pred cCCceeEechHHHHHHHHHhhhhcCCceecccceecceeeeeeee-----eecCChhHHhhhhhccceEEEEecC-CeEE Q lcl|Aclame:pro 466 YNDVNRWVPLAADIAGLCARTDAVSQPWMSPAGYNRGQIMNVVKL-----AIEPRKAHRDRLYQAAINPVIGAGG-EGFI 539 (666) Q Consensus 466 ~~~~~~~~p~s~~~ag~~a~~d~~~g~~~span~~~~~i~g~~~~-----~~~~~~~~~~~Ln~~gIn~i~~~~g-~G~~ 539 (666) -.-|.+||+++.. .--+..+|.-...+.+.|...+ ...++...++.|..+|..+.+.++| .|+. T Consensus 174 --------~~~G~~aGRL~na--avsVadsP~Rv~tG~l~gl~~~p~d~~~~~l~~a~l~aLd~agy~vp~~Y~gy~G~Y 243 (370) T protein:vir:78 174 --------TLAGAYAGRLCNR--AVSIADSPCRVKTGALVGLGNKPVGKDGIPLPLATLQTLEANRYSVPMWYPDYDGIY 243 (370) T ss_pred --------ccHHHHHHHHhcC--eeeecccceeeeccccccccccccccCCcccCHHHHHHHHhCCCeEEEeeCCCCceE Confidence 1247778865431 2226778877666556553322 2447788999999999999999998 4899 Q ss_pred EEcceecCCCccccceeehhhHHHHHHHHHHHHH-HHHhhCCCC--HHHHHHHHHHHHHHHHHHHhcCCeee--eEEEEc Q lcl|Aclame:pro 540 LMGDKTATTVPSPFDRINVRRLFNMLKKNIGDSS-KYKLFENND--NFTRASFRMEVSQYLSTIRSLGGIYD--FRVQCD 614 (666) Q Consensus 540 ~wG~rT~~~~~~~~~~i~vrR~~~~i~~~~~~~~-~~~v~epn~--~~~~~~i~~~i~~~l~~l~~~gal~g--~~v~~d 614 (666) +-++||+....+++++|..+|..+-+.|.++..+ +...+|-.| +......+..+..=|+++.+.+.+.| |.-+|. T Consensus 244 ~~d~~tl~~~gsDYq~ie~~RVvdKa~R~vR~~ai~~i~D~~lnst~gsia~~~~~~~~~L~ema~s~~i~~~~fpgeI~ 323 (370) T protein:vir:78 244 WADGRTLDAEGGDYQVIENLRIAYKVARRMRLRAIARIGDRSFNSTPGSTAAAITYFGKDLREMAKSTTINGQPFPGDIA 323 (370) T ss_pred EeCceEeccCCCChhhhhhhhHHHHHHHHHHHHHHHHhCCcccCCCCcchhHHHHHHHhhHHHHHhhhhhcccccceeEe Confidence 9999999888889999999999999999999544 444443222 22223344444555666666777776 433343 Q ss_pred ccC---CCHHHhhCCEEEEEEEEEecCCccEEEEEEEE----eecch Q lcl|Aclame:pro 615 TTN---NTPDVIDRNEFVASMFIKPAKSINYIMLNFTA----VATGS 654 (666) Q Consensus 615 ~~~---n~~~~i~~G~~~~~i~~~p~~p~e~i~~~~~~----~~~~~ 654 (666) ... =++.-+...++.+.+.+.|.--...|+..|.- ...+- T Consensus 324 ~p~d~Di~i~w~s~~~v~I~~~v~P~~~pk~Itv~I~LDls~e~~~~ 370 (370) T protein:vir:78 324 SPQDGDIRIQWVAKNLVSVFVVVRTVDCPKGITVNIMLDLSLNNGEG 370 (370) T ss_pred ccCCCcceEEeeccceEEEEEEEEeccCCceEEEEEEEeeccccCCC Confidence 211 12223478889999999999888888877643 32222 No 58 >protein:vir:1996 Length: 495 # NCBI annotation: major tail subunit # Family: family:all:369 # MgeID: mge:320 # MgeName: Mu # Cross-refs: genbank:acc:NP_050643;genbank:gi:9633530;genbank:GeneID:2636269 Probab=98.74 E-value=7.1e-08 Score=59.77 Aligned_cols=449 Identities=10% Similarity=0.053 Sum_probs=209.9 Q ss_pred CceecCceEEEEecCCccccccCc--CceEEEEecc---CCCCCcCEEeCCHHHHHHHcCCcCCCchhHHHHHHHHHhCC Q lcl|Aclame:pro 1 MTLLSPGFETKETTLSTTIVQSAT--GRAALVGKFQ---WGPAFQIIQVTNEVELVNKFGQPDNNTADYFMSGANFLQYG 75 (666) Q Consensus 1 ~~~~~PGVyvee~~~~~~i~~v~t--sv~~fvG~~~---~Gpv~~p~~i~s~~~~~~~fG~~~~~~~~~~~~~~~f~ngg 75 (666) =....||+|+| ++.+.-..|.++ ...-+||..- ..|.++|++|+|.+|-...|| ..+.+..+++.|..+.- T Consensus 11 ~~iRvP~~y~E-~dns~A~~g~~~~~q~vLiiGq~la~gs~~~~~pv~v~s~~~a~~~fG---~GS~la~M~~a~~~~n~ 86 (495) T protein:vir:19 11 SDVRVPLTYIE-FDNSNAVSGTPAPRQRVLMFGQSGSKASAAPNVPVRIRSGSQASAAFG---QGSMLALMADAFLNANR 86 (495) T ss_pred cccccCeEEEE-EccCCCCcCCcCCCceEEEEEecCcccccccceeEEecCHHHHHHhcC---cCcHHHHHHHHHHHhCC Confidence 34568999998 555544444444 4557888743 347899999999999999999 67888888888887655 Q ss_pred -CeEEEEEcccCcccccccccccccceeeecccccccccccceeeeccccccccccccccccccceeEEeeccccccccc Q lcl|Aclame:pro 76 -NDLRVVRVLNKEKAKNATALAGNIEFEITNEGSNYEVGDTIKIKHNRQDIETAGKVTKVDGDGKVKGVFIPTGKIIAHA 154 (666) Q Consensus 76 -~~~~vvRv~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~a 154 (666) .++|++-+.|.... +++ +.+++ . + .++.. T Consensus 87 ~~~l~~i~~~D~aG~-aA~---g~it~--t--g-------------------------------------~at~~----- 116 (495) T protein:vir:19 87 VAELWCIPQGNGTGN-AAV---GEISL--S--G-------------------------------------TAGEN----- 116 (495) T ss_pred cceEEEEeeCChhhc-eeE---EEEEE--e--e-------------------------------------cCCCC----- Confidence 79999988652111 110 00000 0 0 00000 Q ss_pred cccceeeecccceeEEEeecccccceeeeeeeeeccceeeeeeccchhhccccceeeeeecccceeeeeeccccccccce Q lcl|Aclame:pro 155 KAIGVYPELDGDWTAEFTSSSGNGSAALSVTKIVTDSGLLLTDLETSRANITNQTFLTKLQKYDMPAVSAIYAGEIGNSL 234 (666) Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~A~~~g~~gn~i 234 (666) +...-..++....+ .+...+++....... . ..+.+. ..+ T Consensus 117 ---G~l~l~I~g~~v~v----------------------~V~~gdTaa~vA~al----~------aaina~------~~l 155 (495) T protein:vir:19 117 ---GSLVTYIAGQRLAV----------------------SVAAGATGAALADLL----V------ARIKGQ------PDL 155 (495) T ss_pred ---cEEEEEECCEEEEE----------------------EecCCCCHHHHHHHH----H------HHhcCC------ccC Confidence 00000000000000 000000000000000 0 000000 001 Q ss_pred eeeeeccccccccccccccccccccccceeeeeeccCcCcccceeeecccccccceeeecccccccccccchhhhHhHhc Q lcl|Aclame:pro 235 EVEILARSAFKNTAPDLTMYPYGGERTAARNLIPYAPQNDNQYAFIVRRDGVVVESYVLSTLKGDKDVYGNSIYMDDFFG 314 (666) Q Consensus 235 ~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~et~~ls~~~~~~~~~~~~~~~~~~~~ 314 (666) .|+........ ........+++...+|.. ....+. ..++. T Consensus 156 PvTA~~~~~~~------------------------~~~a~~~VtlTAr~kG~~-n~idi~-----------~~~~~---- 195 (495) T protein:vir:19 156 PVTAEVRADSG------------------------DDDTHADVVLSAKFTGAL-SAVDVR-----------WNYYA---- 195 (495) T ss_pred ceEEEeeccCC------------------------CCcCceeEEEEEeecccc-ccceeE-----------EEeec---- Confidence 11110000000 000001112222222210 000000 00000 Q ss_pred ccCceEEEEecccccccc-ceeeeecCcccccccccccccccccccchhhhhhhhhcchhhcCccEEecccCCCchhHHH Q lcl|Aclame:pro 315 RGSSQYIYATAQGWVDGF-SGIISLAGGVSANEATTGGVGADPFIGAMMQGWGLFAERESIHVNLLIAGACAGEGDAFST 393 (666) Q Consensus 315 ~~~s~~i~~~~~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ll~~p~~~~~~~~~~~ 393 (666) .+..+... .....++||.... ++. ..++.......++|++|-- + .+ T Consensus 196 ----------ge~~p~Glt~titamsgGag~P--------------Dia---~alaal~~~~~~~I~~P~t-----D-~a 242 (495) T protein:vir:19 196 ----------GETTPYGIITAFKAASGKNGNP--------------DIS---ASIAGMGDLQYKYIVMPYT-----D-EP 242 (495) T ss_pred ----------ccccccceeEEEEecCCCCCCc--------------chH---HHHHHhccCCCcEEEEecC-----c-HH Confidence 01111111 1222334333211 111 1222333446788888732 1 22 Q ss_pred HHHHHHHHhhccccEEEEEcCCccccccccccCCHHHHHHHHhhccccchhhcccCcceEEEEcCeEEEecCcCCceeEe Q lcl|Aclame:pro 394 VQKHAVSIGDERQDCLVMVSPPRSTVVNIPVTTAIDNLIAWREGSGNYNENNMNINTTYAVIDGNYKYQYDKYNDVNRWV 473 (666) Q Consensus 394 v~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~p~~~~~d~~~~~~~~~ 473 (666) -..++.++++.++..+--.+ .+.-.....+..+..+|-.. .|+.|..+.+ + ++ -.- T Consensus 243 sL~al~~~l~~rw~~~~q~~----g~~~~a~~gT~~~l~t~g~~----------~N~~~it~~~--~------~g--sp~ 298 (495) T protein:vir:19 243 NLNLLRTELQERWGPVNQAD----GFAVTVLSGTYGDISTFGVS----------RNDHLISCMG--I------AG--APE 298 (495) T ss_pred HHHHHHHHHHHhhhHHHhcC----eEEEEeecCCHHHHHHhhhc----------cCCceEEEEe--c------CC--CCC Confidence 33577777776543211111 11111223456667766654 4566666542 1 11 111 Q ss_pred chHH---HHHHHHH---hhhhcCCceecccceecceeeeeeeeeecCChhHHhhhhhccceEEEEecCCeEEEEcceec- Q lcl|Aclame:pro 474 PLAA---DIAGLCA---RTDAVSQPWMSPAGYNRGQIMNVVKLAIEPRKAHRDRLYQAAINPVIGAGGEGFILMGDKTA- 546 (666) Q Consensus 474 p~s~---~~ag~~a---~~d~~~g~~~span~~~~~i~g~~~~~~~~~~~~~~~Ln~~gIn~i~~~~g~G~~~wG~rT~- 546 (666) ||.. .+|+..+ +.| |-+.--...+.||.- ..+...++..|+|.|.-+||.++.--++.-..+-=..|. T Consensus 299 ~~~~~AAA~aa~~A~~l~~D----PArPL~tl~L~Gi~~-p~~~~r~~~~ern~LL~~Gist~~V~~~G~V~I~R~ITTY 373 (495) T protein:vir:19 299 PSYLYAATLCAVASQALSID----PARPLQTLTLPGRMP-PAVGDRFTWSERNALLFDGISTFNVNDGGEMQIERMITMY 373 (495) T ss_pred cHHHHHHHHHHHHHHHhhcc----cccccCceeecceec-CCccccCChHHHHHHHhCCcceEEECCCCeEEEEeeeeee Confidence 3332 3333333 344 322222233333321 244566899999999999999987654433555555554 Q ss_pred ----C-CCccccceeehhhHHHHHHHHHHHHHHHHh-hCCCCHH-----------HHHHHHHHHHHHHHHHHhcCCeeee Q lcl|Aclame:pro 547 ----T-TVPSPFDRINVRRLFNMLKKNIGDSSKYKL-FENNDNF-----------TRASFRMEVSQYLSTIRSLGGIYDF 609 (666) Q Consensus 547 ----~-~~~~~~~~i~vrR~~~~i~~~~~~~~~~~v-~epn~~~-----------~~~~i~~~i~~~l~~l~~~gal~g~ 609 (666) . ..|..|..|+.-|+.+|+++.++......- -+..-+. +-..||..+-.-+++|..+|.+..+ T Consensus 374 ~~n~~G~~D~syLDi~T~~tl~yvr~~~r~~i~~kfpR~KLa~d~~~~~~gq~IvTp~~ir~ell~~~~~le~~given~ 453 (495) T protein:vir:19 374 RTNKYGDSDPSYLNVNTIATLSYLRYSLRTRITQKFPNYKLASDGTRFATGQAVVTPSVIKTELLALFEEWENAGLVEDF 453 (495) T ss_pred eecCCCCcchhhhhhHHHHHHHHHHHHHHHHHhhhcCCcccccCCCCCCCcccccChHHHHHHHHHHHHhhhhhccccCh Confidence 1 233578999999999999999998775322 1212111 5567899999999999999999873 Q ss_pred ---E--EEEcccCCCHHHhhCCEEEEEEEEEecCCccEEEEEEEEee Q lcl|Aclame:pro 610 ---R--VQCDTTNNTPDVIDRNEFVASMFIKPAKSINYIMLNFTAVA 651 (666) Q Consensus 610 ---~--v~~d~~~n~~~~i~~G~~~~~i~~~p~~p~e~i~~~~~~~~ 651 (666) + +.|...-+ +.+|+.+.+-...+-+.+-+-.+++-.- T Consensus 454 ~~~~~~LiVerd~~-----dpnRln~~~p~d~vn~L~V~A~~i~f~L 495 (495) T protein:vir:19 454 DTFKEELYVARNKD-----DKDRLDVLCGPNLINQFRIFAAQVQFIL 495 (495) T ss_pred hhhcceeEEEECCC-----CCcEEEEEecceeeCceeeeeeeeeeeC Confidence 2 33432221 2366776665555555444433333222 No 59 >protein:vir:5260 Length: 502 # NCBI annotation: hypothetical protein # Family: family:all:396 # MgeID: mge:117 # MgeName: Aaphi23 # Cross-refs: genbank:acc:NP_852765;genbank:gi:31544040;uniprot:Q7Y5T5;genbank:GeneID:2753559 Probab=98.39 E-value=9.1e-07 Score=53.71 Aligned_cols=463 Identities=11% Similarity=0.016 Sum_probs=216.6 Q ss_pred Ccee-cCceEEEEecCCccccccCcCceEEEEec-cCCCC---CcCEEeCCHHHHHHHcCCcCCCchhHHHHHHHHHhCC Q lcl|Aclame:pro 1 MTLL-SPGFETKETTLSTTIVQSATGRAALVGKF-QWGPA---FQIIQVTNEVELVNKFGQPDNNTADYFMSGANFLQYG 75 (666) Q Consensus 1 ~~~~-~PGVyvee~~~~~~i~~v~tsv~~fvG~~-~~Gpv---~~p~~i~s~~~~~~~fG~~~~~~~~~~~~~~~f~ngg 75 (666) |++= +.=|.|..-..+..+.+..=+...|+|.- ..-|. ..-...+|..|-...|| ..+.++.+++.+|-+-= T Consensus 1 msip~s~ivnV~i~~~~~a~~~~~f~~~l~l~~~~~~~~~~~~~r~~~~~s~~~V~~~FG---~~s~ey~aA~~yF~q~p 77 (502) T protein:vir:52 1 MALSISHIVNVQLNTVPKSAARKSFGIVALFTPEAGQAFADEKTRYVYVENQRDVEQLFG---TNSETAKAAQPFFAQSP 77 (502) T ss_pred CCCCccceeEEeeccccccccccccCceEEEeeccCccccCCccceEEecCHHHHHHhcC---CChHHHHHHHHHhcCCC Confidence 8875 44455553334555666666778888873 34333 33344578899999999 67788888999995422 Q ss_pred --CeEEEEEcccCcccccccccccccceeeecccccccccccceeeeccccccccccccccccccceeEEeecccccccc Q lcl|Aclame:pro 76 --NDLRVVRVLNKEKAKNATALAGNIEFEITNEGSNYEVGDTIKIKHNRQDIETAGKVTKVDGDGKVKGVFIPTGKIIAH 153 (666) Q Consensus 76 --~~~~vvRv~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~ 153 (666) +++||-|-......... ..+.. .+ ..+. .. .........| T Consensus 78 ~P~~l~igR~~~~~~~~~~--~~~~~------~~------~~~~-----~~--~~~~~~~~~G----------------- 119 (502) T protein:vir:52 78 RAKQLIVARWQKSASTIEA--TKNTL------SG------ATLS-----DD--LERFKSVVNG----------------- 119 (502) T ss_pred ccceEEEEeccccccceee--chhhh------hh------hhhH-----Hh--HHHhhhhcCc----------------- Confidence 57788776442211110 00000 00 0000 00 0000000000 Q ss_pred ccccceeeecccceeEEEeecccccceeeeeeeeeccceeeeeeccchhhccccceeeeeecccceeeeeeccccccccc Q lcl|Aclame:pro 154 AKAIGVYPELDGDWTAEFTSSSGNGSAALSVTKIVTDSGLLLTDLETSRANITNQTFLTKLQKYDMPAVSAIYAGEIGNS 233 (666) Q Consensus 154 a~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~A~~~g~~gn~ 233 (666) .+.-..++...... ...-+ ......+.....+...+..+.. T Consensus 120 -----~l~i~i~g~~~t~~--------------~i~lS--------------------~~ts~~~vA~~i~~~l~~~~~~ 160 (502) T protein:vir:52 120 -----RFSLTIGGDVKKVD--------------GLSFA--------------------RLADFNAVATKIQEKLTTLSVA 160 (502) T ss_pred -----eeEEEecceeeeee--------------ccccc--------------------cccchhHHHHHHHhhhcccccc Confidence 00000000000000 00000 0000000000000000000000 Q ss_pred eeeeeeccccccccccccccccccccccceeeeeeccCcCcccceeeecccccccc-eeeecccccccccccchhhhHhH Q lcl|Aclame:pro 234 LEVEILARSAFKNTAPDLTMYPYGGERTAARNLIPYAPQNDNQYAFIVRRDGVVVE-SYVLSTLKGDKDVYGNSIYMDDF 312 (666) Q Consensus 234 i~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~e-t~~ls~~~~~~~~~~~~~~~~~~ 312 (666) .++..... ...|.+.....|.... ++..... ......++... T Consensus 161 ~tv~~d~~--------------------------------~~~F~i~s~ttg~~~~~~~~~a~~-----~~~~gt~~a~~ 203 (502) T protein:vir:52 161 VSIAYDET--------------------------------GNRFIVSANVAGEDKKTEIDYAID-----EGGEGEYIGAL 203 (502) T ss_pred eEEEEecC--------------------------------CceEEEEeccCCCcceeEEEEeec-----CCcchhHHHHH Confidence 11111000 0001111100000000 0000000 00001111111 Q ss_pred hcc-cCceEEEEeccccccccceeeeecCcccccccccccccccccccchhhhhhhhhcchh-hcCccEEecccCCCchh Q lcl|Aclame:pro 313 FGR-GSSQYIYATAQGWVDGFSGIISLAGGVSANEATTGGVGADPFIGAMMQGWGLFAERES-IHVNLLIAGACAGEGDA 390 (666) Q Consensus 313 ~~~-~~s~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~ll~~p~~~~~~~~ 390 (666) +.. ..+..+.... ...+... ..+.. .+.++... .+.-.+.+... . T Consensus 204 l~l~~~~~av~v~~------------~~~g~~a--------------et~~~--al~a~~~~~~~w~~~~~a~~-----~ 250 (502) T protein:vir:52 204 LKLENGQASRKVGK------------NSVSLKK--------------ETLGE--ALFNVAEVNNTWYGFTVAAQ-----L 250 (502) T ss_pred hccccccceeeeee------------ecccccc--------------cCHHH--HHHHHHhccCceEEEEEeec-----C Confidence 110 0000000000 0000000 00000 01111110 11112222211 1 Q ss_pred HHHHHHHHHHHhhccccEEEEEcCCccccccccccCCHHHHHHHHhhccccchhhcccCcceEE-EEcCeEEEecCcCCc Q lcl|Aclame:pro 391 FSTVQKHAVSIGDERQDCLVMVSPPRSTVVNIPVTTAIDNLIAWREGSGNYNENNMNINTTYAV-IDGNYKYQYDKYNDV 469 (666) Q Consensus 391 ~~~v~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~-~~~p~~~~~d~~~~~ 469 (666) ..+...++..+++....+|........ ..+.. ..++....+.. +..|.. +|++ .+ T Consensus 251 ~~~~~la~a~~iea~~~~f~~~~~d~~-~~~~~----~~~i~~~l~a~----------~~~~t~~~y~~-------~~-- 306 (502) T protein:vir:52 251 TDSEVEAAAKYAQANTKLFGANVIRAE-QIEWS----ADNIYKKLYDA----------GLDHTLAMFDK-------ND-- 306 (502) T ss_pred ChhHHHHHHHHHhhcCcEEEEEecCcc-eeccc----cchHHHHHHhc----------cCceeEEEecC-------Cc-- Confidence 122344666777766666655432221 11111 11111111111 112222 2322 11 Q ss_pred eeEechHHHHHHHHHhhhhcCC-ceecccceecceeeeeeeeeecCChhHHhhhhhccceEEEEecCCeEEEEcceecCC Q lcl|Aclame:pro 470 NRWVPLAADIAGLCARTDAVSQ-PWMSPAGYNRGQIMNVVKLAIEPRKAHRDRLYQAAINPVIGAGGEGFILMGDKTATT 548 (666) Q Consensus 470 ~~~~p~s~~~ag~~a~~d~~~g-~~~span~~~~~i~g~~~~~~~~~~~~~~~Ln~~gIn~i~~~~g~G~~~wG~rT~~~ 548 (666) -.+.+.+.|.++.+|..+- -...-.+|.+. |+. .-.++..|.+.|..+++|++.++.+.+ .+..++++++ T Consensus 307 ---~~~~aa~~g~~as~~f~~~~g~iT~~fk~l~---GV~--~~~lt~t~~~al~~~~~N~y~~~~~~~-~~~~G~~~~G 377 (502) T protein:vir:52 307 ---MYPVSSALARLLSTNFAANNSTLTLKFKQQP---TIT--ADEITATEFAKAKRLGINVYTYFDDVA-MIAEGTVIGG 377 (502) T ss_pred ---chhHHHHHHHHHhcCCCcCcceeeecccccC---Ccc--cCcCCHHHHHHHHhcCceEEEEecCee-EEecCeeeCC Confidence 1256777888888875432 11222355444 332 235899999999999999999987665 4667777776 Q ss_pred CccccceeehhhHHHHHHHHHHHHHHHHhhC-----CCCHHHHHHHHHHHHHHHHHHHhcCCee---------------- Q lcl|Aclame:pro 549 VPSPFDRINVRRLFNMLKKNIGDSSKYKLFE-----NNDNFTRASFRMEVSQYLSTIRSLGGIY---------------- 607 (666) Q Consensus 549 ~~~~~~~i~vrR~~~~i~~~~~~~~~~~v~e-----pn~~~~~~~i~~~i~~~l~~l~~~gal~---------------- 607 (666) + ||-+.+-.+||+..|++.+...++. |-|+.=...|+..|+.-|++-+++|.|. T Consensus 378 ---~--~iD~~~~~~Wl~~~lq~~l~~~L~~s~~kIPy~~~G~~~l~a~i~~~l~~a~~~G~I~~G~~~~~~~g~~~~~d 452 (502) T protein:vir:52 378 ---K--FADEIVILDWFVDAVQKEVFARLYKSPTKIPLTDKGQAILIAAVEKVCLEGINNGAFAPGKWTGAGFGNLSTGD 452 (502) T ss_pred ---c--hhhHHHHHHHHHHHHHHHHHHHHHhcCCCcccChhHHHHHHHHHHHHHHHHHhcCccccccccCcccceeeecc Confidence 2 6778889999999999998876653 5577778999999999999999999984 Q ss_pred ----eeEEEEc-ccCCCHHHhhCCEE-EEEEEEEecCCccEEEEEEEEee Q lcl|Aclame:pro 608 ----DFRVQCD-TTNNTPDVIDRNEF-VASMFIKPAKSINYIMLNFTAVA 651 (666) Q Consensus 608 ----g~~v~~d-~~~n~~~~i~~G~~-~~~i~~~p~~p~e~i~~~~~~~~ 651 (666) ||.|.+. .++.+++|..+++. -|.+.+.+...+++|+|.+.-.+ T Consensus 453 ~~~~gy~v~~~~~~~~s~~dr~~R~~~~~~~~~~~aGaIh~v~i~~nv~~ 502 (502) T protein:vir:52 453 YLDKGFYVWAAPMDTLSDSDRQARRATPIQTAVKLAGAIHSSDVIVNYNR 502 (502) T ss_pred cccCceEEEeCchhhCCHHHHHcccCCCeEEEEEECceEEEEEEEEEEeC Confidence 5889887 56789999999988 89999999999999999877666 No 60 >protein:vir:80052 Length: 331 # NCBI annotation: gp14 # Family: family:all:396 # MgeID: mge:1876 # MgeName: B054 # Cross-refs: genbank:acc:YP_001468718;genbank:gi:157325298;genbank:GeneID:5601743 Probab=98.36 E-value=1.1e-06 Score=53.32 Aligned_cols=299 Identities=16% Similarity=0.091 Sum_probs=151.4 Q ss_pred ccceee-----eccc-ccccccccchhhhHhHhc--ccCceEEEEeccccccccce--------eeeecCcccccccccc Q lcl|Aclame:pro 287 VVESYV-----LSTL-KGDKDVYGNSIYMDDFFG--RGSSQYIYATAQGWVDGFSG--------IISLAGGVSANEATTG 350 (666) Q Consensus 287 ~~et~~-----ls~~-~~~~~~~~~~~~~~~~~~--~~~s~~i~~~~~~~~~~~~~--------~~~~~~g~~~~~~~~~ 350 (666) ++++.+ +... .-.....+ ...++- .......+...++....... ...+..+..+... T Consensus 1 ~~~~iv~V~v~~~~~~~~~~~~~~----~~~~~~~~t~~~~~~y~s~~~v~~d~~~~~~~Ykaa~~~f~Q~~~~~~i--- 73 (331) T protein:vir:80 1 MVETITDVRVHISVLYPSPRIGLG----RPAIFVKGTAMGYKEYTTLEELKDTFADNTEVYAKAKAVFLQKDRPDTV--- 73 (331) T ss_pred CccceecceeeecccccccccccC----cceeEEeccccceEEEechhhhccCCCCCcHHHHHHHHHHhccCccceE--- Confidence 111111 1000 00000000 000000 00000011111110000000 0000000000000 Q ss_pred cccccccccchhhhhhhhhcchhh--cCccEEecccCCCchhHHHHHHHHHHHhhccccEEEEEcCCccccccccccCCH Q lcl|Aclame:pro 351 GVGADPFIGAMMQGWGLFAERESI--HVNLLIAGACAGEGDAFSTVQKHAVSIGDERQDCLVMVSPPRSTVVNIPVTTAI 428 (666) Q Consensus 351 ~~~~~~~~~~~~~~~~l~~~~~~~--~~~ll~~p~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~ 428 (666) ..+.......+.++.+.. .--.+++.+. ..+-..++.++++....+|.+.+.. .. T Consensus 74 ------~v~~~~~~~~~~a~~a~~~~~w~~~~~~~~------~~~~~~a~a~~~~a~~~~f~~~~~~-----------~~ 130 (331) T protein:vir:80 74 ------AVITYEDTKLLEAAEAYFLKSWHFALLAEF------KAADALALSNLIEEQKFKFAVFQVT-----------AV 130 (331) T ss_pred ------EEeccchHHHHHHHHHhccCceeEEEeecC------CHHHHHHHHHHHhhCCcEEEEEecC-----------ch Confidence 000000001111111100 0002222221 1122335555556555555544321 11 Q ss_pred HHHHHHHhhccccchhhcccCcceEEEEcCeEEEecCcCCceeEechHHHHHHHHHhhhhcCCceecccceecceeeeee Q lcl|Aclame:pro 429 DNLIAWREGSGNYNENNMNINTTYAVIDGNYKYQYDKYNDVNRWVPLAADIAGLCARTDAVSQPWMSPAGYNRGQIMNVV 508 (666) Q Consensus 429 ~~~~~~~~~~~~~~~~~~~~~s~~~~~~~p~~~~~d~~~~~~~~~p~s~~~ag~~a~~d~~~g~~~span~~~~~i~g~~ 508 (666) .++....+ ++....++++. .+ - .+.+.+.|.++..+.-+--| ++|. .+.|+. T Consensus 131 ~~~~~~~~------------~~~t~~~~~~~-------~~---~-~~~aa~~g~~~~~~~g~~t~---~fk~--~l~GV~ 182 (331) T protein:vir:80 131 ADITPLAK------------NTRTIAIVHSK-------TG---E-KLDAALIGNVASLPVGSATW---KGRH--GLAGIT 182 (331) T ss_pred HHHHHhhc------------cccEEEEEcCC-------cc---c-hhHHHHHHHHHhcCccceee---eeec--ccCCCC Confidence 11111100 12233333331 11 1 13566667777776533223 2442 233443 Q ss_pred eeeecCChhHHhhhhhccceEEEEecCCeEEEEcceecCCCccccceeehhhHHHHHHHHHHHHHHHHhhC----CCCHH Q lcl|Aclame:pro 509 KLAIEPRKAHRDRLYQAAINPVIGAGGEGFILMGDKTATTVPSPFDRINVRRLFNMLKKNIGDSSKYKLFE----NNDNF 584 (666) Q Consensus 509 ~~~~~~~~~~~~~Ln~~gIn~i~~~~g~G~~~wG~rT~~~~~~~~~~i~vrR~~~~i~~~~~~~~~~~v~e----pn~~~ 584 (666) . -.++..|++.|..+++|++.++.+. -.++.+.|++++ ||-+.+-.+|++..|++.+...+-. |-|+. T Consensus 183 ~--~~lt~t~~~al~~~~~N~y~~~~~~-~~~~~G~~~~G~-----~iD~~~~~dWl~~~lq~~l~~ll~~~~kiPy~~~ 254 (331) T protein:vir:80 183 S--EELKVSEIDAIQKAGGMCYIEKAGI-AQTSEGKTVSGE-----FIDSIHGDDWIKATIETRLQKLLTETDKLTFDAR 254 (331) T ss_pred C--CCCCHHHHHHHHhcCceEEEEecCe-eEEecceEeCch-----hHHHHHHHHHHHHHHHHHHHHHHHhCCCCccChh Confidence 2 3579999999999999999998765 446677777662 6889999999999999998776543 45777 Q ss_pred HHHHHHHHHHHHHHHHHhcCCee--------eeEEEEc-ccCCCHHHhhCCEEE-EEEEEEecCCccEEEEEEEEee Q lcl|Aclame:pro 585 TRASFRMEVSQYLSTIRSLGGIY--------DFRVQCD-TTNNTPDVIDRNEFV-ASMFIKPAKSINYIMLNFTAVA 651 (666) Q Consensus 585 ~~~~i~~~i~~~l~~l~~~gal~--------g~~v~~d-~~~n~~~~i~~G~~~-~~i~~~p~~p~e~i~~~~~~~~ 651 (666) =...|+..++.-|++-+++|.|. ||.|.+. .++.+++|+.+++.. +.+.+.+...+++|+|++...- T Consensus 255 G~~~l~a~i~~~~~~av~~G~I~~g~~~~~~~~~v~~~~~~~~s~~dr~~R~~~~~~~~~~~~gaI~~v~i~~~v~~ 331 (331) T protein:vir:80 255 GIALLQSELTTVLNEGFANGIIDSNDETGEPNFSITALQRSDLNDDDIAKRNYKGLSFRYKRSGAIHSVDVYGEVEV 331 (331) T ss_pred hHHHHHHHHHHHHHHHHhCCceecCccCCCcceEEEeCchhcCCHHHHhccCCCCeEEEEEEcceEEEEEEEEEEeC Confidence 78899999999999999999996 6889887 467799999998886 8888999999999999877665 No 61 >protein:vir:99586 Length: 507 # NCBI annotation: hypothetical protein # Family: family:all:396 # MgeID: mge:1544 # MgeName: BcepF1 # Cross-refs: genbank:acc:YP_001039795;genbank:gi:126011045;genbank:GeneID:4818281 Probab=96.30 E-value=0.00077 Score=37.66 Aligned_cols=457 Identities=10% Similarity=0.024 Sum_probs=200.7 Q ss_pred CceecCceEEEEecCCccccc--cCcCceEEEEeccCCCCCcCEEeCCHHHHHHHcCCcCCCchhHHHHHHHHHhCC--- Q lcl|Aclame:pro 1 MTLLSPGFETKETTLSTTIVQ--SATGRAALVGKFQWGPAFQIIQVTNEVELVNKFGQPDNNTADYFMSGANFLQYG--- 75 (666) Q Consensus 1 ~~~~~PGVyvee~~~~~~i~~--v~tsv~~fvG~~~~Gpv~~p~~i~s~~~~~~~fG~~~~~~~~~~~~~~~f~ngg--- 75 (666) |--++= +|+..+...+-.+ ..-..+.|++.-..=|+++....+|..|-...|| ..+.++.+++.+|-+-- T Consensus 1 mip~s~--iVnV~~~v~~~a~~~~~~~~~lilt~~~~~~~~r~~~y~s~~~V~~~FG---~~S~ey~aA~~yFsq~p~~~ 75 (507) T protein:vir:99 1 MISQSR--YVRIVSGVGAGAPVAQRRLIMRVMTTNAVLPPGVVFESSSADAVGAYFG---MASEEYKRAKAYMSFISKSI 75 (507) T ss_pred CCCccc--eeEEeeeccccCcccccccceeeeccccCCCccceEeecCHHHHHHhcC---CChHHHHHHHHHhccCCCCC Confidence 655543 4443343333333 3345777888766668888888999999999999 67788888999998764 Q ss_pred ---CeEEEEEcccCcccccccccccccceeeecccccccccccceeeeccccccccccccccccccceeEEeeccc-ccc Q lcl|Aclame:pro 76 ---NDLRVVRVLNKEKAKNATALAGNIEFEITNEGSNYEVGDTIKIKHNRQDIETAGKVTKVDGDGKVKGVFIPTG-KII 151 (666) Q Consensus 76 ---~~~~vvRv~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~-~~~ 151 (666) ++|||-|-.+.... +...++...... ........| .+.+.+.+... +......... ... T Consensus 76 ~~P~~L~igR~~~~~~~--a~l~g~~~~~~l-~~~~~~~~G-~lti~v~G~~~-------------t~~~i~lS~~ts~~ 138 (507) T protein:vir:99 76 NSPSYISFARWVNAAIA--SMIVGDSLVKNL-PALKAVATP-TLSLSIGGTVV-------------PIAGIDLTAALTLT 138 (507) T ss_pred cccceEEEEeecCcccc--ceeecchhhhhH-HHHhhhcce-eEEEEEcCcee-------------EeccccccccCCHH Confidence 49999998652221 111111111000 000000000 01111111000 0000000000 000 Q ss_pred ccccccceeeecccceeEEEeecccccceeeeeeeeeccceeeeeeccchhhccccceeeeeecccceeeeeeccccccc Q lcl|Aclame:pro 152 AHAKAIGVYPELDGDWTAEFTSSSGNGSAALSVTKIVTDSGLLLTDLETSRANITNQTFLTKLQKYDMPAVSAIYAGEIG 231 (666) Q Consensus 152 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~A~~~g~~g 231 (666) ..+..+........... ....++........+.+...... ...... ...+..+|+ T Consensus 139 ~vAs~i~~~l~a~~~~~----------~~~~tv~~d~~~~~F~v~s~~tG--~~s~i~-----------~at~~~~gt-- 193 (507) T protein:vir:99 139 DVAATLQTKIRASANAE----------LATATVTFNTTTNQFVLNGTTTG--ALAPTI-----------TAVRTDPAT-- 193 (507) T ss_pred HHHHHHHHhhhcccccc----------ccceEEEEecCCceEEEEeeecc--ccceeE-----------EEEcCCchh-- Confidence 00000000000000000 00000000000000010000000 000000 000001111 Q ss_pred cceeeeeeccccccccccccccccccccccceeeeeeccCcCcccceeeecccccccceeeecccccccccccchhhhHh Q lcl|Aclame:pro 232 NSLEVEILARSAFKNTAPDLTMYPYGGERTAARNLIPYAPQNDNQYAFIVRRDGVVVESYVLSTLKGDKDVYGNSIYMDD 311 (666) Q Consensus 232 n~i~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~et~~ls~~~~~~~~~~~~~~~~~ 311 (666) .+. .+...... . . +...|...|+ ....+.. T Consensus 194 -~~s--------------~l~~~~~~------------------~-a--~~~~g~~aet--------------~~~a~~a 223 (507) T protein:vir:99 194 -DIS--------------SLLGWTNT------------------G-T--VFVKGQAAET--------------PDTSISK 223 (507) T ss_pred -hHH--------------HHhccccc------------------c-c--eEeecccccC--------------HHHHHHH Confidence 000 00000000 0 0 0000110000 0001111 Q ss_pred HhcccCceEEEEeccccccccceeeeecCcccccccccccccccccccchhhhhhhhhcchhhcCccEEecccCCCchhH Q lcl|Aclame:pro 312 FFGRGSSQYIYATAQGWVDGFSGIISLAGGVSANEATTGGVGADPFIGAMMQGWGLFAERESIHVNLLIAGACAGEGDAF 391 (666) Q Consensus 312 ~~~~~~s~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ll~~p~~~~~~~~~ 391 (666) ..+. ...+.... +...|.. . T Consensus 224 ~~~~-~~nW~~~~-----------------------------------------------------~a~~~~~------t 243 (507) T protein:vir:99 224 SAAI-STNFGSFI-----------------------------------------------------YTSTPAL------T 243 (507) T ss_pred HHhh-cCCeEEEE-----------------------------------------------------EEecccc------C Confidence 1110 11110000 0000000 0 Q ss_pred HHHHHHHHHHhhccccEEEEEcCCccccccccccCCHHHHHHHHhhccccchhhcccCcceEEEEcCeEEEecCcCCcee Q lcl|Aclame:pro 392 STVQKHAVSIGDERQDCLVMVSPPRSTVVNIPVTTAIDNLIAWREGSGNYNENNMNINTTYAVIDGNYKYQYDKYNDVNR 471 (666) Q Consensus 392 ~~v~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~p~~~~~d~~~~~~~ 471 (666) .....++..++|....++.+.-.-.. . ....+..... ....+...++.+ ..- T Consensus 244 d~~~lalA~wiea~~~~f~~~~~~~~------a-----~~~~~~~~~~--------~~~~~~~~~~~~---------~~~ 295 (507) T protein:vir:99 244 NDQITAVASWNASQNNMYMYSVPTTI------A-----NIGTLYAAVK--------GFSGCALNITSD---------SLP 295 (507) T ss_pred hHHHHHHHHHHhhcCcEEEEEEecCc------h-----hhhhhhhhhh--------hcceeEEEeecc---------ccc Confidence 11224555566655555543311100 0 0000000000 000011111111 111 Q ss_pred EechHHHHHHHHHhhhhcC--C--ceecccceecceeeeeeeeeecCChhHHhhhhhccceEEEEecCC--eEEEEccee Q lcl|Aclame:pro 472 WVPLAADIAGLCARTDAVS--Q--PWMSPAGYNRGQIMNVVKLAIEPRKAHRDRLYQAAINPVIGAGGE--GFILMGDKT 545 (666) Q Consensus 472 ~~p~s~~~ag~~a~~d~~~--g--~~~span~~~~~i~g~~~~~~~~~~~~~~~Ln~~gIn~i~~~~g~--G~~~wG~rT 545 (666) ..++.+.+.|.++.+|.++ | -|+ .|.+ .|+. ...++..|.+.|..+++|++..+.+. .+.+|-.-. T Consensus 296 ~~~~~aa~~g~~as~nf~~~ng~~T~~---fk~l---~GV~--a~~lt~t~a~al~~~n~N~y~~~a~~~~~~~~~~~G~ 367 (507) T protein:vir:99 296 VDYIEQSPCEILAATDYTRVNATQNYM---YYQF---PSRN--ITVSDDTTANLVDANRGNYIGQTQSAGQSLAFYQRGI 367 (507) T ss_pred chhHHHHHHHHHHhhccCcCccceeec---cccc---CCcc--cccCCHHHHHHHHhcCCeEEEEeccccceeeEEecCe Confidence 1235677778888887533 2 222 3333 3332 23589999999999999999988764 366665544 Q ss_pred cCCCccccceeehhhHHHHHHHHHHHHHHHHhhC----CCCHHHHHHHHHHHHHHHHHHHhcCCee-------------- Q lcl|Aclame:pro 546 ATTVPSPFDRINVRRLFNMLKKNIGDSSKYKLFE----NNDNFTRASFRMEVSQYLSTIRSLGGIY-------------- 607 (666) Q Consensus 546 ~~~~~~~~~~i~vrR~~~~i~~~~~~~~~~~v~e----pn~~~~~~~i~~~i~~~l~~l~~~gal~-------------- 607 (666) +++-..+|.++.+-+=.+||++.++..+....-. |-|+.=...|+..|+.-|++-+++|.|. T Consensus 368 ~~gG~~~fid~d~~~~~~WL~~~iq~~l~~l~~~~~kIPyt~~G~~~l~a~i~~~l~~av~nG~I~~Gvtl~~~q~~~in 447 (507) T protein:vir:99 368 LCGGPNDAVDMNIYANEIWLKSAISAQILSLFLNVPRVPANETGESMLLSVIQSVVNTAKNNGTISAGKNLNVIQQQYIT 447 (507) T ss_pred eeCCcccceeeeeecchHHHHHHHHHHHHHHHhcCCCCccChhhHHHHHHHHHHHHHHHHhccccccCCcccccchheec Confidence 4433235777766666778888888888764332 4578888899999999999999998883 Q ss_pred ---------------eeEEEEcc-cCCCH-HHhhCCEEEEEEEEEecCCccEEEEEEEEe Q lcl|Aclame:pro 608 ---------------DFRVQCDT-TNNTP-DVIDRNEFVASMFIKPAKSINYIMLNFTAV 650 (666) Q Consensus 608 ---------------g~~v~~d~-~~n~~-~~i~~G~~~~~i~~~p~~p~e~i~~~~~~~ 650 (666) ||.+.++. ++.++ +...++-..+.+.+.---.+++|++.-... T Consensus 448 ~~~~~~~~~~~~~~~Gyy~~~~~~s~~~~~~r~~r~~~~~~~~y~~~gaI~~v~~~~~~v 507 (507) T protein:vir:99 448 QISGDANAWRQVANIGYWLNITFSSYTNPNTQLTEWKASYQLIYSKDDAIRFVEGTDTLI 507 (507) T ss_pred ccccccccccceeccceEEEeCChHhcChhhhhccccceEEEEEEeCCeEEEEEeeeecC Confidence 27777753 44454 444577777888888888889888764444 No 62 >protein:vir:3165 Length: 426 # NCBI annotation: capsid protein CP67 # Family: family:all:28419 # MgeID: mge:316 # MgeName: PhiCh1 # Cross-refs: genbank:acc:NP_665936;genbank:gi:22091122;genbank:GeneID:951267 Probab=95.25 E-value=0.0024 Score=34.90 Aligned_cols=361 Identities=11% Similarity=0.004 Sum_probs=142.7 Q ss_pred ccccccccccccccccccccccceeeeeeccCcCccccee--eecccccc-----ccee-eeccccc-ccc-cccchhhh Q lcl|Aclame:pro 240 ARSAFKNTAPDLTMYPYGGERTAARNLIPYAPQNDNQYAF--IVRRDGVV-----VESY-VLSTLKG-DKD-VYGNSIYM 309 (666) Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~v~~~g~~-----~et~-~ls~~~~-~~~-~~~~~~~~ 309 (666) +. . ....+.+.. ...+.....|.. .+...... .+.. .-+.... +.+ +...+.|. T Consensus 1 m~---~-~iVnV~Is~------------~t~A~~~~~Fg~~liigs~~~~~p~~~f~~~~~Yss~~~V~~Dfg~~s~~Y~ 64 (426) T protein:vir:31 1 MP---K-QIVEIELTA------------EIADRPQETFTDAAIVGTAEEEPPDAEFGEVNQYSTSTSVGDDYGEDSDVYT 64 (426) T ss_pred CC---c-ceEEEEeec------------ccccccccccceeeeeeeccccccccccchhhhhhhHHHHHhcCCCChHHHH Confidence 00 0 000000000 000011111111 11111000 0000 0000000 001 11122221 Q ss_pred --HhHhcccCceEEEEeccccccccceeeeecCcccccccccccccccccccchhhhhhhhhcchhhc------------ Q lcl|Aclame:pro 310 --DDFFGRGSSQYIYATAQGWVDGFSGIISLAGGVSANEATTGGVGADPFIGAMMQGWGLFAERESIH------------ 375 (666) Q Consensus 310 --~~~~~~~~s~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~------------ 375 (666) ..++.+. ....+.............. ..+.+-.........+....... -..++.+..+... T Consensus 65 AA~~~f~Q~-~~~~r~~v~~at~~~~~~~-t~~~tv~g~~~s~~a~~~~~a~~--i~~~~~~~~~~~~~~~~~~~~t~~g 140 (426) T protein:vir:31 65 ASEAIEEMG-AEQWRVMVLEATEVTEEEL-SDGDTIDKVPILGNHEVESPDGD--IEFTTDDDPDVEDFDAEIVINSATG 140 (426) T ss_pred HHHHHHhCC-ceeEEeeccccceeeeccC-CcceeecceeeeecccCcchHHH--HHHhhccccccccceeeeEeccccc Confidence 1223221 1111111111100000000 00000000000000000000000 0000000000000 Q ss_pred ---------------------------CccEEecccCCCchhHHHHHHHHHHHhhccccEEEEEcCCccccccccccCCH Q lcl|Aclame:pro 376 ---------------------------VNLLIAGACAGEGDAFSTVQKHAVSIGDERQDCLVMVSPPRSTVVNIPVTTAI 428 (666) Q Consensus 376 ---------------------------~~ll~~p~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~ 428 (666) ++.-.++..... -....+..++...++..+-.+...... ...-... T Consensus 141 ~~t~~~~~~~~~~s~~dw~~~~~~~s~~~~~~ia~~~~~-~~~~~~~~~~~~wa~~~~i~~va~~~e------~~~~~~~ 213 (426) T protein:vir:31 141 DVATSEDSIELTYFHADWSQLDEFPSDVNNFAVADRRFD-LKGVGVLDETHSWASDEDMGMIANGVN------VDDYDSV 213 (426) T ss_pred eeeccccceeeeeccCcchhhhcccccchhhhhhccccc-hhhhhhhHhhhhhhhhcceeeeeeccc------hhhhcch Confidence 110011111000 001111111111111111100000000 0000011 Q ss_pred HHHHHHHhhccccchhhcccCcceEEEEcCeEEEecCcCCceeEe-chHHHHHHHHHhhhhcCCceecccceecceee-- Q lcl|Aclame:pro 429 DNLIAWREGSGNYNENNMNINTTYAVIDGNYKYQYDKYNDVNRWV-PLAADIAGLCARTDAVSQPWMSPAGYNRGQIM-- 505 (666) Q Consensus 429 ~~~~~~~~~~~~~~~~~~~~~s~~~~~~~p~~~~~d~~~~~~~~~-p~s~~~ag~~a~~d~~~g~~~span~~~~~i~-- 505 (666) +..+.++.. .+-|.|........ . ..- -..+++++.++..+ ||..|.-+...+-. T Consensus 214 ~~~~a~~~~---------------~~~y~p~~~~~~~~-~--~~~~~~~~~~~~~~aa~~----~~~~~~~~~~~~~~~~ 271 (426) T protein:vir:31 214 DEAMDVAHE---------------VAGYVPSGDLMMIV-D--ASDDDLAAYQLGKFAVSE----PWYNPLWNELPAGETV 271 (426) T ss_pred hhhhhhhhc---------------ccccccchhheeeh-h--ccccchhhHHhhhhhhhc----cccchhhhhccccccc Confidence 112222211 11122221110000 0 000 12567778888776 56665322221111 Q ss_pred ----eeeeeeecCChhHHhhhhhccceEEEEecCCeEEEEcceecCCCccccceeehhhHHHHHHHHHHHHHHHHhh--- Q lcl|Aclame:pro 506 ----NVVKLAIEPRKAHRDRLYQAAINPVIGAGGEGFILMGDKTATTVPSPFDRINVRRLFNMLKKNIGDSSKYKLF--- 578 (666) Q Consensus 506 ----g~~~~~~~~~~~~~~~Ln~~gIn~i~~~~g~G~~~wG~rT~~~~~~~~~~i~vrR~~~~i~~~~~~~~~~~v~--- 578 (666) +-.+....+..+++-.++ +..|+++.+.+ +..+|-+-|..+....-.||-++|..+||++.++..++..+= T Consensus 272 ~~~~~~~gv~~t~~~~~~A~~~-~~~n~~~~~~~-~~~i~~~~~~~G~~~~G~~iD~~~g~dwl~~~iq~~l~~ll~~~~ 349 (426) T protein:vir:31 272 SKNVGDPEEQGTFEGGDEAEGE-GPVNVLIDVSD-ANRVSNAVTTAGADSDTSFFDIRRTKVYTAEMLELDLESLQVSDD 349 (426) T ss_pred eeeccccccccccchhhhhhhc-CCceEEEEecC-ceeeecceeecccccchhhhhhHHHHHHHHHHHHHHHHHHhhcCC Confidence 111222223334445565 77799998865 577777777766655667899999999999999999987653 Q ss_pred C-CCCHHHHHHHHHHHHHHHHHHHhcCC--eeeeEEEEcccCCCHHHhhCCEEE-EEEEEEecCCccEEEEEEEEee Q lcl|Aclame:pro 579 E-NNDNFTRASFRMEVSQYLSTIRSLGG--IYDFRVQCDTTNNTPDVIDRNEFV-ASMFIKPAKSINYIMLNFTAVA 651 (666) Q Consensus 579 e-pn~~~~~~~i~~~i~~~l~~l~~~ga--l~g~~v~~d~~~n~~~~i~~G~~~-~~i~~~p~~p~e~i~~~~~~~~ 651 (666) + |-|+.-...|+..|+.-|++.++.|. +.+|.|...+...++.|..+.++. +.+..+....++++.|+..-+- T Consensus 350 KIpyt~~Gi~~I~~~i~~~L~~~v~~~g~~~~~y~v~~P~~~~~~~dra~R~~~~i~~~~~laGAIh~v~I~g~v~v 426 (426) T protein:vir:31 350 DVPFTEDGQAMIEDAIKGTMSGLTGSVGQPLAEYEVDVPEWDDDDVDRVNRNWGGIDLDARLAQRAHTFSLGLNVSV 426 (426) T ss_pred CCccchhHHHHHHHHHHHHHHHHhcCCCccccceeecCCCccccchhhhhhccCCceEEEEEeCcEEEEEEEEEEeC Confidence 2 67888888999999999999998644 557998877555566788887776 8888899999999999877665 No 63 >protein:vir:96104 Length: 504 # NCBI annotation: hypothetical protein ORF029 # Family: family:all:396 # MgeID: mge:1597 # MgeName: F8 # Cross-refs: genbank:acc:YP_001294446;genbank:gi:149408343;genbank:GeneID:5237223 Probab=93.43 E-value=0.0076 Score=32.20 Aligned_cols=453 Identities=11% Similarity=0.043 Sum_probs=200.0 Q ss_pred CceecCceEEEEecCC--ccccccCcCceEEEEeccCCCCCcCEEeCCHHHHHHHcCCcCCCchhHHHHHHHHHhCC--- Q lcl|Aclame:pro 1 MTLLSPGFETKETTLS--TTIVQSATGRAALVGKFQWGPAFQIIQVTNEVELVNKFGQPDNNTADYFMSGANFLQYG--- 75 (666) Q Consensus 1 ~~~~~PGVyvee~~~~--~~i~~v~tsv~~fvG~~~~Gpv~~p~~i~s~~~~~~~fG~~~~~~~~~~~~~~~f~ngg--- 75 (666) |--++= +|+..+.. .......-.++-|++.-..=|+++....+|..|-...|| ..+.++.+++.+|-+-- T Consensus 1 mip~s~--iV~V~~~v~~~~~~~~~~~~~l~l~~~~~~~~~r~~~y~s~~~V~~~FG---~~S~ey~aA~~yF~~~~~~~ 75 (504) T protein:vir:96 1 MISQSR--YIRIISGVGAGAPVAGRKLILRVMTTNNVIPPGIVIEFDNANAVLSYFG---AQSEEYQRAAAYFKFISKSV 75 (504) T ss_pred CCCccc--eeEeeecccccccccccccceeEeecccCCCccceEEecCHHHHHHhcC---CChHHHHHHHHHhhcCCCCC Confidence 655554 44433333 233333456778888877778888888899999999999 56688889999998844 Q ss_pred ---CeEEEEEcccCcccccccccccccceeeecccccccccccceeeeccccccccccccccccccceeEEeeccccc-c Q lcl|Aclame:pro 76 ---NDLRVVRVLNKEKAKNATALAGNIEFEITNEGSNYEVGDTIKIKHNRQDIETAGKVTKVDGDGKVKGVFIPTGKI-I 151 (666) Q Consensus 76 ---~~~~vvRv~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~-~ 151 (666) +++||-|=.+.... +...++...... ........| .+.+.+.+... .......+.... . T Consensus 76 ~~P~~l~igR~~~~a~~--~~l~g~~~~~~~-~~~~~i~~G-~lsitv~G~~~-------------~~~~i~~S~~ts~~ 138 (504) T protein:vir:96 76 NSPSSISFARWVNTAIA--PMVVGDNLPKTI-ADFAGFSAG-VLTIMVGAAEK-------------NITAIDTSAATSMD 138 (504) T ss_pred ccccEEEEEeecCcCcc--ceEEechhHHHH-HHHhhhhce-EEEEEEcceee-------------eecccccccccchH Confidence 79999996432111 111111111000 000000000 01111111000 000000000000 0 Q ss_pred ccccccceeeecccceeEEEeecccccceeeeeeeeeccceeeeeeccchhhccccceeeeeecccceeeeeeccccccc Q lcl|Aclame:pro 152 AHAKAIGVYPELDGDWTAEFTSSSGNGSAALSVTKIVTDSGLLLTDLETSRANITNQTFLTKLQKYDMPAVSAIYAGEIG 231 (666) Q Consensus 152 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~A~~~g~~g 231 (666) ..+..+....... ........++........+.+.... ++. ..............+ T Consensus 139 ~vA~~i~~al~~~----------~~~~~~~~tv~~d~~~~~f~its~~------tg~--------~~~~~~~~a~~~~~~ 194 (504) T protein:vir:96 139 NVASIIQTEIRKN----------TDPQLAQATVTWNPNTNQFTLVGAT------IGT--------GVLAVAKSADPQDMS 194 (504) T ss_pred HHHHHHHhhhhcc----------cccccccceEEEeccCCeEEEEeec------ccc--------ceeEEEeeccccchh Confidence 0000000000000 0000000001000011111111000 000 000000000000000 Q ss_pred cceeeeeeccccccccccccccccccccccceeeeeeccCcCcccceeeecccccccceeeecccccccccccchhhhHh Q lcl|Aclame:pro 232 NSLEVEILARSAFKNTAPDLTMYPYGGERTAARNLIPYAPQNDNQYAFIVRRDGVVVESYVLSTLKGDKDVYGNSIYMDD 311 (666) Q Consensus 232 n~i~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~et~~ls~~~~~~~~~~~~~~~~~ 311 (666) ..+.+.. ..... ..|...|+ ....+.. T Consensus 195 ~~lgl~~------------------------------------~~~~~---v~g~~aet--------------~~~al~a 221 (504) T protein:vir:96 195 TALGWST------------------------------------SNVVN---VAGQAADL--------------PDAAVAK 221 (504) T ss_pred hhhhccc------------------------------------ccceE---Eeeccccc--------------HHHHHHH Confidence 0000000 00000 00000000 0000010 Q ss_pred HhcccCceEEEEeccccccccceeeeecCcccccccccccccccccccchhhhhhhhhcchhhcCccEEecccCCCchhH Q lcl|Aclame:pro 312 FFGRGSSQYIYATAQGWVDGFSGIISLAGGVSANEATTGGVGADPFIGAMMQGWGLFAERESIHVNLLIAGACAGEGDAF 391 (666) Q Consensus 312 ~~~~~~s~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ll~~p~~~~~~~~~ 391 (666) ..+ ....+ ..++.+... .. T Consensus 222 l~~-~~~~W-------------------------------------------------------y~f~~a~~~-----~~ 240 (504) T protein:vir:96 222 STN-VSNNF-------------------------------------------------------GSFLFAGAT-----LD 240 (504) T ss_pred HHh-hcCCe-------------------------------------------------------EEEEEEecc-----CC Confidence 000 00000 001111000 00 Q ss_pred HHHHHHHHHHhhccccEEEEEcCCccccccccccCCHHHHHHHHhhccccchhhcccCcceEEEEcCeEEEecCcCCcee Q lcl|Aclame:pro 392 STVQKHAVSIGDERQDCLVMVSPPRSTVVNIPVTTAIDNLIAWREGSGNYNENNMNINTTYAVIDGNYKYQYDKYNDVNR 471 (666) Q Consensus 392 ~~v~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~p~~~~~d~~~~~~~ 471 (666) .....++..+++....++...-. +.. ... ......... .+.....+++.. . .. T Consensus 241 dd~ilalA~w~ea~~~~~~~~~~------~~~-~~~-~~~~~~~~~----------~~~~~~~~~~~~------~---~~ 293 (504) T protein:vir:96 241 NDQIKAVSAWNAAQNNQFIYTVA------TSL-ANL-GALFDLVKG----------NSGTALNVLSAT------A---SN 293 (504) T ss_pred HHHHHHHHHHHhhcCceEEEEEe------ecc-cch-hhHHHhhhh----------cceeEEEEeecC------c---cc Confidence 11123455556554443332211 000 011 111111111 011111122111 1 11 Q ss_pred EechHHHHHHHHHhhhhcC--C--ceecccceecceeeeeeeeeecCChhHHhhhhhccceEEEEecCCe--EEEE-cce Q lcl|Aclame:pro 472 WVPLAADIAGLCARTDAVS--Q--PWMSPAGYNRGQIMNVVKLAIEPRKAHRDRLYQAAINPVIGAGGEG--FILM-GDK 544 (666) Q Consensus 472 ~~p~s~~~ag~~a~~d~~~--g--~~~span~~~~~i~g~~~~~~~~~~~~~~~Ln~~gIn~i~~~~g~G--~~~w-G~r 544 (666) . -++.+..+.++.+|..+ | .|+ .|.+ .|+. ...++..|.+.|..+|+|++..+.+.| +.+| .+. T Consensus 294 ~-~~~~~~~~~~as~~f~~~ng~~T~~---fk~l---~GVt--a~~lt~t~~~aL~~~~~N~y~~~a~~~~~~~~~~~G~ 364 (504) T protein:vir:96 294 D-FVEQCPSEILAATNYDEPGASQNYM---YYQF---PGRN--ITVSDDTAANTVDKSRGNYIGVTQANGQQLAFYQRGI 364 (504) T ss_pred h-hHHHHHHHHHHhcCcCccccccccc---cccc---CCcC--cccCCHHHHHHHHhcCCeEEEEeecccceeeEEecCe Confidence 1 23555667777777443 2 333 4443 3443 235799999999999999998887554 4455 555 Q ss_pred ecCCCccccceeehhhHHHHHHHHHHHHHHHHhhC----CCCHHHHHHHHHHHHHHHHHHHhcCCee------------- Q lcl|Aclame:pro 545 TATTVPSPFDRINVRRLFNMLKKNIGDSSKYKLFE----NNDNFTRASFRMEVSQYLSTIRSLGGIY------------- 607 (666) Q Consensus 545 T~~~~~~~~~~i~vrR~~~~i~~~~~~~~~~~v~e----pn~~~~~~~i~~~i~~~l~~l~~~gal~------------- 607 (666) ++++. .+|.+|.+-+-.+||++.|+..+....-. |.|+.=...|+..|+.-|++-+++|.|. T Consensus 365 ~~gG~-~~~~wiDv~~~~~WL~~~lq~~l~~l~~~~~kIPyt~~Gi~~l~a~i~~vl~~av~~G~I~~Gv~~~~~q~~~I 443 (504) T protein:vir:96 365 LCGGP-TDAVDMNVYANEIWLKSAIAQALLDLFLNVNAVPASMVGEAMTLAVLQPVLDKATSNGTFTYGKDISAVQQQYI 443 (504) T ss_pred eeCCc-cccchhhhhhhHHHHHHHHHHHHHHHHhcCCCcccCHhhHHHHHHHHHHHHHHHHhcceeccCccCCccchhee Confidence 55554 25778999999999999999999775433 4478888999999999999999999872 Q ss_pred ----------------eeEEEEcc-cCCCHHHh-hCCEEEEEEEEEecCCccEEEEEEEEe Q lcl|Aclame:pro 608 ----------------DFRVQCDT-TNNTPDVI-DRNEFVASMFIKPAKSINYIMLNFTAV 650 (666) Q Consensus 608 ----------------g~~v~~d~-~~n~~~~i-~~G~~~~~i~~~p~~p~e~i~~~~~~~ 650 (666) ||+|.++. ++.+++|. .++-..+.+.+.---.+++|++.-.-. T Consensus 444 ~~~~~~d~~~~~~~~~GYyv~~~~~s~~s~~~r~~R~~~~~~~~y~~~gaI~~v~~~~~~v 504 (504) T protein:vir:96 444 TQITGDRRAWRQVQTLGYWINITFSSYTNSNTGLTEWKANYTLIYSKGDAIRFVEGSDVMI 504 (504) T ss_pred cccccccccccceeccceEEEecChhccChhHhhhccccceEEEEEECCeEEEEEeccccC Confidence 48888763 44455544 455557777777888888887753322 No 64 >protein:vir:101576 Length: 501 # NCBI annotation: gp04 # Family: family:all:396 # MgeID: mge:1477 # MgeName: Bcep43 # Cross-refs: genbank:acc:NP_958108;genbank:gi:41057654;genbank:GeneID:2716834 Probab=93.40 E-value=0.0077 Score=32.18 Aligned_cols=450 Identities=11% Similarity=0.031 Sum_probs=201.6 Q ss_pred Cce--ecCceEEEEecCCccccccCcC-ceEEEEeccCCCCCcCEEeCCHHHHHHHcCCcCCCchhHHHHHHHHH---hC Q lcl|Aclame:pro 1 MTL--LSPGFETKETTLSTTIVQSATG-RAALVGKFQWGPAFQIIQVTNEVELVNKFGQPDNNTADYFMSGANFL---QY 74 (666) Q Consensus 1 ~~~--~~PGVyvee~~~~~~i~~v~ts-v~~fvG~~~~Gpv~~p~~i~s~~~~~~~fG~~~~~~~~~~~~~~~f~---ng 74 (666) |-+ +-=.-+|+..+...+-.+++-+ .+-|++....=|+++..+.+|..|-...|| ..+.++.+++.+|- |. T Consensus 1 m~~~~ip~s~iV~V~~~v~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~s~~~V~~~FG---~~S~ey~aA~~yFsg~~~q 77 (501) T protein:vir:10 1 MPTTTIPIDQIVQMLPGVIGAGGAPGRLTGLVLTQDTSVQPGQLADFFQETDVENWFG---ALSNEAKIADAYFPGIVNG 77 (501) T ss_pred CCCCCcccceEEEEeeecccCCCccccceeEEEeccCCCCccceEEecCHHHHHHhcC---CChHHHHHHHHHhhhhcCC Confidence 776 4445666655544443333333 234677777778999999999999999999 67778888888886 22 Q ss_pred C---CeEEEEEcccCcccccccccccccceeeecccccccccccceeeeccccccccccccccccccceeEEeecccccc Q lcl|Aclame:pro 75 G---NDLRVVRVLNKEKAKNATALAGNIEFEITNEGSNYEVGDTIKIKHNRQDIETAGKVTKVDGDGKVKGVFIPTGKII 151 (666) Q Consensus 75 g---~~~~vvRv~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~ 151 (666) . +++||-|-...... +...++.+. ...... ..... + T Consensus 78 ~p~P~~l~igR~~~~~~~--~~l~g~~l~---------------------~~~la~---~~~~s--g------------- 116 (501) T protein:vir:10 78 GQLPYDLKFARYVAADAP--ASVYGIPLT---------------------GVTLAQ---LQGYS--G------------- 116 (501) T ss_pred CccccEEEEEeecCCCcc--ceEeccchh---------------------hhhhhh---cceee--e------------- Confidence 2 68999997542111 000000000 000000 00000 0 Q ss_pred ccccccceeeecccceeEEEeecccccceeeeeeeeeccceeeeeeccchhhccccceeeeeecccceeeeeeccccccc Q lcl|Aclame:pro 152 AHAKAIGVYPELDGDWTAEFTSSSGNGSAALSVTKIVTDSGLLLTDLETSRANITNQTFLTKLQKYDMPAVSAIYAGEIG 231 (666) Q Consensus 152 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~A~~~g~~g 231 (666) .+.-..++. .. . .....+..+ ....+...+.. .+.+ T Consensus 117 -------~l~vti~g~-~~-------------~-~~i~ls~at--s~~~vAs~i~~-------------al~~------- 152 (501) T protein:vir:10 117 -------TLTVTTAAQ-HV-------------S-ANISLAAAT--SFANAATLIEA-------------AFTS------- 152 (501) T ss_pred -------EEEEeeccc-ee-------------e-ccccccccc--CHHHHHHHHhh-------------hccC------- Confidence 000000000 00 0 000000000 00000000000 0000 Q ss_pred cceeeeeeccccccccccccccccccccccceeeeeeccCcCcccceeeecccccccceeeecccccccccccchhhhHh Q lcl|Aclame:pro 232 NSLEVEILARSAFKNTAPDLTMYPYGGERTAARNLIPYAPQNDNQYAFIVRRDGVVVESYVLSTLKGDKDVYGNSIYMDD 311 (666) Q Consensus 232 n~i~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~et~~ls~~~~~~~~~~~~~~~~~ 311 (666) ...+|... .....|.+.....|... + ++...+ ..++.+ T Consensus 153 ~~~tv~~d--------------------------------~~~~~f~its~ttG~~~-~--i~~~~~-------~~~la~ 190 (501) T protein:vir:10 153 PDFVVAYD--------------------------------ALRNRFTVVTNATGTAA-A--ISAVTG-------TNNLAD 190 (501) T ss_pred CceEEEEc--------------------------------ccCceEEEEeeccCCce-e--EEEeeC-------chhhhh Confidence 00000000 00011111111111100 0 000000 000111 Q ss_pred Hhcc--cCceEEEEeccccccccceeeeecCcccccccccccccccccccchhhhhhhhhcchh-hc-CccEEecccCCC Q lcl|Aclame:pro 312 FFGR--GSSQYIYATAQGWVDGFSGIISLAGGVSANEATTGGVGADPFIGAMMQGWGLFAERES-IH-VNLLIAGACAGE 387 (666) Q Consensus 312 ~~~~--~~s~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~-~~ll~~p~~~~~ 387 (666) .+.- .....+ ....... ..+... +.++... .+ ..+..+.. T Consensus 191 ~l~Lt~~~~a~v-~~~g~~a-----------------------------et~~~a--~~a~~~~~~~Wy~f~~a~~---- 234 (501) T protein:vir:10 191 ELGLSAAAGATL-QAAGVAA-----------------------------DTPASA--MNRAVGLSRNWATFTTAWT---- 234 (501) T ss_pred hcCccccccceE-EecCccc-----------------------------ccHHHH--HHHHHhccCceEEEEEecC---- Confidence 0000 000000 0000000 000000 0011100 00 11111211 Q ss_pred chhHHHHHHHHHHHhhccccEEEEEcCCcc-ccccccccCCHHHHHHHHhhccccchhhcccCcceEEEEcCeEEEecCc Q lcl|Aclame:pro 388 GDAFSTVQKHAVSIGDERQDCLVMVSPPRS-TVVNIPVTTAIDNLIAWREGSGNYNENNMNINTTYAVIDGNYKYQYDKY 466 (666) Q Consensus 388 ~~~~~~v~~~~~~~~~~~~~~~~~~d~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~p~~~~~d~~ 466 (666) ...+...++..+++....++.+.-.... ...+ .....++....+. .+..+..++|+. T Consensus 235 --~~~~~~la~A~wiea~~~~f~~~~~~~~~~~~~---~~~~~~i~~~l~~----------~~y~~t~~~y~~------- 292 (501) T protein:vir:10 235 --AVIADRLAFAAWNSGQAYKYMYVAPDLEAASIV---TNNAASFGAQVFA----------APYQGTLPLYGD------- 292 (501) T ss_pred --CChHHHHHHHHHHHhcCceEEEEEecCchhhhh---hhhhhhHHHHHHh----------cCCCceEEECCC------- Confidence 1122334566666655444333211110 0010 1111111111111 123345555432 Q ss_pred CCceeEechHHHHHHHHHhhhhcCCce-ecccceecceeeeeeeeeecCChhHHhhhhhccceEEEEecCC--eEEEEcc Q lcl|Aclame:pro 467 NDVNRWVPLAADIAGLCARTDAVSQPW-MSPAGYNRGQIMNVVKLAIEPRKAHRDRLYQAAINPVIGAGGE--GFILMGD 543 (666) Q Consensus 467 ~~~~~~~p~s~~~ag~~a~~d~~~g~~-~span~~~~~i~g~~~~~~~~~~~~~~~Ln~~gIn~i~~~~g~--G~~~wG~ 543 (666) ..+.+.+.|.++.+|.++-.- ..-.+|.+. .|+ ..-.++..|.+.|..+|+|+...+.+. -+.+|-. T Consensus 293 ------~~~~aa~~g~~as~nf~~~~g~~T~~fkq~~--~Gi--~a~~lt~t~a~al~~~~~N~y~~~~~~~~~~~~~~~ 362 (501) T protein:vir:10 293 ------QATAGAVMGYAASINFQLRNGRTVLAFRQFN--AGV--PATAHDLPTANALRSNNYTYIGAYANAANNYTIAYD 362 (501) T ss_pred ------CcHHHHHHHHHHhhCcccCccceeeeccccC--CCc--CcccCCHHHHHHHHhcCCeEEEEeccccceeeEEec Confidence 125667788888888644210 011123211 011 123479999999999999999988653 4778865 Q ss_pred eecCCCccccceeehhhHHHHHHHHHHHHHHHHhhC----CCCHHHHHHHHHHHHHHHHHHHhcCCee------------ Q lcl|Aclame:pro 544 KTATTVPSPFDRINVRRLFNMLKKNIGDSSKYKLFE----NNDNFTRASFRMEVSQYLSTIRSLGGIY------------ 607 (666) Q Consensus 544 rT~~~~~~~~~~i~vrR~~~~i~~~~~~~~~~~v~e----pn~~~~~~~i~~~i~~~l~~l~~~gal~------------ 607 (666) -+++++ |.+|.+-+-.+|+++.++..+....-. |.|..=...|+..|+.-|++-+++|.|. T Consensus 363 G~~sG~---~~wiD~~~~~~Wl~~~iq~~l~~ll~~~~kIPyt~~G~~~l~a~v~~~l~~av~nG~I~~Gv~l~~~q~~~ 439 (501) T protein:vir:10 363 GKLSGK---FLWVDTYLDQIYLNAELQRAEFEAMLAYNSLPYNEDGYTALYRAGVDVIDAAVTSGIIRAGVTLTNSQLQQ 439 (501) T ss_pred Ceeecc---ceeehhhhhHHHHHHHHHHHHHHHHHhcCCcccCHHHHHHHHHHHHHHHHHHHhCceeecCCCCCccccee Confidence 566653 566777777788888888877664433 5588888899999999999999999883 Q ss_pred -----------------eeEEEEcccCC-CHHHhhCCEEEEEEEEEecCCccEEEEEEEEee Q lcl|Aclame:pro 608 -----------------DFRVQCDTTNN-TPDVIDRNEFVASMFIKPAKSINYIMLNFTAVA 651 (666) Q Consensus 608 -----------------g~~v~~d~~~n-~~~~i~~G~~~~~i~~~p~~p~e~i~~~~~~~~ 651 (666) ||.+.++...+ +++...+.-..+.+.+.--..+++|++-..... T Consensus 440 i~~~~g~~~~~~~v~~~Gyy~~~~~~~~~~~~R~~R~~p~~~~~y~~~gaIh~v~i~s~~v~ 501 (501) T protein:vir:10 440 IDAAAGVAGAGQLVQTRGWYFLIGDPANPGQARQNRTTPACTLWYSDGGSIQQLTIGSNAVI 501 (501) T ss_pred eccccCccccccceeccceeEeeccccCChhhhhhccccceEEEEEeCCceeEEEeeeeecC Confidence 37777775433 344444555677777777888888876543333 No 65 >protein:vir:107720 Length: 515 # NCBI annotation: gp17 # Family: family:all:396 # MgeID: mge:1520 # MgeName: BcepB1A # Cross-refs: genbank:acc:YP_024865;genbank:gi:48697507;genbank:GeneID:2948336 Probab=93.01 E-value=0.0091 Score=31.77 Aligned_cols=463 Identities=12% Similarity=0.015 Sum_probs=190.4 Q ss_pred CceecCceEEEEecCCccccccCc-C-ceEEEEeccCCCCCcCEEeCCHHHHHHHcCCcCCCchhHHHHHHHHH---hC- Q lcl|Aclame:pro 1 MTLLSPGFETKETTLSTTIVQSAT-G-RAALVGKFQWGPAFQIIQVTNEVELVNKFGQPDNNTADYFMSGANFL---QY- 74 (666) Q Consensus 1 ~~~~~PGVyvee~~~~~~i~~v~t-s-v~~fvG~~~~Gpv~~p~~i~s~~~~~~~fG~~~~~~~~~~~~~~~f~---ng- 74 (666) |. ++.-|+|+..+.+..-.|++. . ..-+++.-..=|++....-.|..|-...|| ..+.++.+++.+|- |. T Consensus 1 m~-I~~~~~V~i~~~v~aa~~~~~~~f~~li~t~~~~~p~~r~~~y~s~~~V~~~FG---~~S~ey~aA~~yFsg~~~q~ 76 (515) T protein:vir:10 1 MP-ISFDKYVAITSGVAAQQQIAARSFAIRVYTPNPMVSVDRLITATSAADVGAYFG---TASEEYKRAVKNFGFISKKT 76 (515) T ss_pred CC-CCceeEEEeecccccCCccccccceeeeeecccCCCccceeeecCHHHHHHhcC---CChHHHHHHHHHhhhccCCc Confidence 77 788899997787777666655 2 233456666668888888899999999999 67777888888886 22 Q ss_pred --CCeEEEEEcccCcccccccccccccceeeecccccccccccceeeeccccccccccccccccccceeEEeeccccccc Q lcl|Aclame:pro 75 --GNDLRVVRVLNKEKAKNATALAGNIEFEITNEGSNYEVGDTIKIKHNRQDIETAGKVTKVDGDGKVKGVFIPTGKIIA 152 (666) Q Consensus 75 --g~~~~vvRv~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~ 152 (666) =+++||-|-..... ++....+... + ..... .....+ T Consensus 77 p~P~~L~igR~~~~a~--~~~l~g~~~~------------~---------~~l~~--~~~is~----------------- 114 (515) T protein:vir:10 77 RRPTSIQFARWQREAG--PVAIYGGAKK------------A---------AALAT--LQAVTA----------------- 114 (515) T ss_pred ccccEEEEEeccCccc--ceEEEeccch------------h---------hhHHh--hhcccc----------------- Confidence 27899988543211 1000000000 0 00000 000000 Q ss_pred cccccceeeeccccee-EEEeecccccceeeeeeeeeccceeeeeeccchhhccccceeeeeecccceeeeeeccccccc Q lcl|Aclame:pro 153 HAKAIGVYPELDGDWT-AEFTSSSGNGSAALSVTKIVTDSGLLLTDLETSRANITNQTFLTKLQKYDMPAVSAIYAGEIG 231 (666) Q Consensus 153 ~a~~~~~~~~~~~~~~-~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~A~~~g~~g 231 (666) +.+.-..++.. ... .....+..+ ....+...+... +.+...... T Consensus 115 -----G~ltitidG~~~~t~--------------s~i~~S~at--s~~~vAs~i~ta-------------l~~~~~~~~- 159 (515) T protein:vir:10 115 -----GAISFLFGGATTVTV--------------SGISFSAAT--SLADVASELQTA-------------LRANADANL- 159 (515) T ss_pred -----eeEEEEEcceEEEEe--------------ecccccccc--CHHHHHHHHHhh-------------hcccccccc- Confidence 00000000000 000 000000000 000000000000 000000000 Q ss_pred cceeeeeeccccccccccccccccccccccceeeeeeccCcCcccceeeecccccccc-eeeecccccccccccchhhhH Q lcl|Aclame:pro 232 NSLEVEILARSAFKNTAPDLTMYPYGGERTAARNLIPYAPQNDNQYAFIVRRDGVVVE-SYVLSTLKGDKDVYGNSIYMD 310 (666) Q Consensus 232 n~i~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~e-t~~ls~~~~~~~~~~~~~~~~ 310 (666) ...+|... .....|.+.....|.... ++..... .....++. T Consensus 160 ~~~tv~~d--------------------------------~~~~~F~v~s~~tG~~~~is~~~~t~------~~~~t~~a 201 (515) T protein:vir:10 160 ATCTVSYD--------------------------------PVGARFNFAGSPSDDTVQESISIVPQ------SNPAIDVA 201 (515) T ss_pred ceeEEEEe--------------------------------cCCCeEEEEEeecCCceeEEEEEecC------CCchhhHH Confidence 00000000 000112222211111000 0000000 00011111 Q ss_pred hHhccc-CceEEEEeccccccccceeeeecCcccccccccccccccccccchhhhhhhhhcchh-hc-CccEEecccCCC Q lcl|Aclame:pro 311 DFFGRG-SSQYIYATAQGWVDGFSGIISLAGGVSANEATTGGVGADPFIGAMMQGWGLFAERES-IH-VNLLIAGACAGE 387 (666) Q Consensus 311 ~~~~~~-~s~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~-~~ll~~p~~~~~ 387 (666) +.+.-. .+..+. ..|.... .+.. .+.++.+. .+ ..++.+..... T Consensus 202 ~~lglt~~~~av~----------------~~g~aae--------------t~~~--a~~a~~~~s~nWy~f~~a~~~~~- 248 (515) T protein:vir:10 202 QLLGWNSAQGASY----------------IAASPVV--------------SPVD--TLIASVAGNNNFGSILFTKNGGT- 248 (515) T ss_pred HHhccccccceEE----------------ecccccc--------------cHHH--HHHHHHhccCCeEEEEEeecCcc- Confidence 111100 000000 0000000 0000 01111110 01 12222221111 Q ss_pred chhHHHHHHHHHHHhhccccEEEEEcCCccccccccccCCHHHHHHHHhhccccchhhcccCcceEEEEcCeEEEecCcC Q lcl|Aclame:pro 388 GDAFSTVQKHAVSIGDERQDCLVMVSPPRSTVVNIPVTTAIDNLIAWREGSGNYNENNMNINTTYAVIDGNYKYQYDKYN 467 (666) Q Consensus 388 ~~~~~~v~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~p~~~~~d~~~ 467 (666) ....+...++..+.+....++....... +.. ....... .+... ...+...+++-. ++ T Consensus 249 -~~~~a~~~a~a~~~e~~~~~~~~~~~~~----~~~-~~~~~a~--~~~~~----------~~~~~~~~~~~~---~~-- 305 (515) T protein:vir:10 249 -GITLSDAEAIALQNQSYNVAYKFQVGVD----DTT-YSSWQAA--LAAIG----------GVNMIYSPVALA---AE-- 305 (515) T ss_pred -ccchhHHHHHHHHHhhcCceEEEEeccC----ccc-eechhhh--hhhhh----------hcCceEEEEecc---Cc-- Confidence 1112233444555555443332221110 000 0001111 11100 001111111210 00 Q ss_pred CceeEechHHHHHHHHHhhhhcCC-ceecccceecceeeeeeeeeecCChhHHhhhhhccceEEEEecC--CeEEEEcce Q lcl|Aclame:pro 468 DVNRWVPLAADIAGLCARTDAVSQ-PWMSPAGYNRGQIMNVVKLAIEPRKAHRDRLYQAAINPVIGAGG--EGFILMGDK 544 (666) Q Consensus 468 ~~~~~~p~s~~~ag~~a~~d~~~g-~~~span~~~~~i~g~~~~~~~~~~~~~~~Ln~~gIn~i~~~~g--~G~~~wG~r 544 (666) . +.....|.++.+|.++- =...-..|.+. |+. .-.+++.|.+.|..+|+|+...+.+ ..+.+|-.- T Consensus 306 -----~-~~a~~~g~~asvnf~~~ng~iT~kfKq~~---Git--a~~lt~t~a~al~~~~~N~Y~~~~~~~~~~~~~~~G 374 (515) T protein:vir:10 306 -----Y-HDMQDGIIEAATDFTQQGGATGYMYVQFN---NQT--PAVNDDTLSGILDDLNINYYGQTQVNGTNLSFYQDG 374 (515) T ss_pred -----c-hHHHHHHHHHhcCCCccchhheeccccCC---CCc--cccCCHHHHHHHHhcCCeEEEEEeccCceEEEEeCC Confidence 1 24456777888775332 11112244333 322 2348999999999999999998865 358888655 Q ss_pred ecCCCccccceeehhhHHHHHHHHHHHHHHHHhhC-----CCCHHHHHHHHHHHH-HHHHHHHhcCCeee---------- Q lcl|Aclame:pro 545 TATTVPSPFDRINVRRLFNMLKKNIGDSSKYKLFE-----NNDNFTRASFRMEVS-QYLSTIRSLGGIYD---------- 608 (666) Q Consensus 545 T~~~~~~~~~~i~vrR~~~~i~~~~~~~~~~~v~e-----pn~~~~~~~i~~~i~-~~l~~l~~~gal~g---------- 608 (666) ++.+-..+|+||.+.|-.+||+..++..+... +. |.++.=...|+..|. .-|++-+++|.|.. T Consensus 375 ~~~gG~~~~~WiD~~~g~~WL~~~iq~~l~~L-~~s~~KIPytd~G~a~i~a~v~q~vl~~av~nG~I~~Gv~ls~~Q~~ 453 (515) T protein:vir:10 375 VMMGGPTDPRDSNVYANEQWLKSYAGASFMSL-QLAQGKIPANIEGRGLLLGKMTKDIIPAAKLNGTFSIGKTLTVDQQL 453 (515) T ss_pred eeeCCccchhHHHHHhhHHHHHHHHHHHHHHH-HhcCCCCccChhhHHHHHHHHHHHHHHHHHhCCeeecCcccchhHHH Confidence 55554446888999999999999999998764 44 346666667777664 57888888887753 Q ss_pred -------------------eEEEEc-ccCCCHHHhhCCEEEEEEEEEecCCccEEEEEEEEe Q lcl|Aclame:pro 609 -------------------FRVQCD-TTNNTPDVIDRNEFVASMFIKPAKSINYIMLNFTAV 650 (666) Q Consensus 609 -------------------~~v~~d-~~~n~~~~i~~G~~~~~i~~~p~~p~e~i~~~~~~~ 650 (666) |++... .+..++.+...+.+.+.....-=-.+++|+...... T Consensus 454 ~i~~~~g~d~~~~~~~~~Gyy~~~~~~~~~~~~~r~~~~~~~~~~y~~g~~i~~i~~~~~~v 515 (515) T protein:vir:10 454 FVTELTGDDTAWQKVQNLGYWYDVQISSFVDTGGTTKYQAVYSLVYSKDDLIRKVVGTHTLI 515 (515) T ss_pred HHHhhhcCcccccchhhcceeEecCcCCCCCcccccccCceeEEEEEcCceEEEEEeeeecC Confidence 333322 222333333333333223333344455555443332 No 66 >protein:vir:106730 Length: 501 # NCBI annotation: gp04 # Family: family:all:396 # MgeID: mge:1599 # MgeName: Bcep1 # Cross-refs: genbank:acc:NP_944312;genbank:gi:38638611;genbank:GeneID:2657359 Probab=81.03 E-value=0.089 Score=26.33 Aligned_cols=450 Identities=10% Similarity=0.015 Sum_probs=201.3 Q ss_pred Cce--ecCceEEEEecCCccccccCcCc-eEEEEeccCCCCCcCEEeCCHHHHHHHcCCcCCCchhHHHHHHHHH---hC Q lcl|Aclame:pro 1 MTL--LSPGFETKETTLSTTIVQSATGR-AALVGKFQWGPAFQIIQVTNEVELVNKFGQPDNNTADYFMSGANFL---QY 74 (666) Q Consensus 1 ~~~--~~PGVyvee~~~~~~i~~v~tsv-~~fvG~~~~Gpv~~p~~i~s~~~~~~~fG~~~~~~~~~~~~~~~f~---ng 74 (666) |-+ +-=.-+|+..+...+-.+++-+- +-+++....=|+++....+|..|-...|| ..+.++.+++.+|- |. T Consensus 1 m~~~~ip~s~iV~V~~~v~~~~~~~~~f~~lll~~~~~~~~~r~~~y~s~~~V~~~FG---~~S~ey~aA~~yFsg~~~q 77 (501) T protein:vir:10 1 MPTTTIPIDQIVQMLPGVIGAGGAPGRLTGLVLTQDTSVQPGQLADFFQKTDVENWFG---ALSNEAKIADAYFPGIVNG 77 (501) T ss_pred CCcCccccceEEEEeeecccCCCcccccceEEEecccCCCccceeeecCHHHHHHhcC---CChHHHHHHHHHhhhhcCC Confidence 877 44456666555444333333332 33666666678888888899999999999 67778888888885 22 Q ss_pred ---CCeEEEEEcccCcccccccccccccceeeecccccccccccceeeeccccccccccccccccccceeEEeecccccc Q lcl|Aclame:pro 75 ---GNDLRVVRVLNKEKAKNATALAGNIEFEITNEGSNYEVGDTIKIKHNRQDIETAGKVTKVDGDGKVKGVFIPTGKII 151 (666) Q Consensus 75 ---g~~~~vvRv~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~ 151 (666) =+++||-|-....... ...++.+............ + .+.+.+ ++.. +.....-...+ T Consensus 78 ~p~P~~l~igR~~~~~~~~--~l~g~~l~~~~la~~~~~~-g-~l~i~i--------------~g~~--~~~~i~~s~at 137 (501) T protein:vir:10 78 GQLPYDLKFARYVAADAPA--SVYGIPLTGITLAQLQGYS-G-TLTVTT--------------AAQH--VSANISLAAAT 137 (501) T ss_pred CccccEEEEEeecccCccc--eeeeceehhhhhhhhhhee-e-EEEEee--------------ccce--eeecccccccc Confidence 2689999975532111 1111111000000000000 0 000000 0000 00000000000 Q ss_pred ccccccceeeecccceeEEEeecccccceeeeeeeeeccceeeeeeccchhhccccceeeeeecccceeeeeeccccccc Q lcl|Aclame:pro 152 AHAKAIGVYPELDGDWTAEFTSSSGNGSAALSVTKIVTDSGLLLTDLETSRANITNQTFLTKLQKYDMPAVSAIYAGEIG 231 (666) Q Consensus 152 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~A~~~g~~g 231 (666) .+ ...+..+...+....+ ....+.......+..... | T Consensus 138 -------s~-----------------~~vA~~i~~al~~~~~----------------tv~~d~~~~~f~i~~~t~---G 174 (501) T protein:vir:10 138 -------SF-----------------ANAATLIEAAFTSPDF----------------VVAYDALRNRFTVVTNTT---G 174 (501) T ss_pred -------CH-----------------HHHHHHHHHhhcCCce----------------EEEEecccceEEEEeccc---C Confidence 00 0000000000000000 000000000111111000 0 Q ss_pred cceeeeeeccccccccccccccccccccccceeeeeeccCcCcccceeeecccccccceeeecccccccccccchhhhHh Q lcl|Aclame:pro 232 NSLEVEILARSAFKNTAPDLTMYPYGGERTAARNLIPYAPQNDNQYAFIVRRDGVVVESYVLSTLKGDKDVYGNSIYMDD 311 (666) Q Consensus 232 n~i~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~et~~ls~~~~~~~~~~~~~~~~~ 311 (666) ...++....... ............ ...+...|...|+ ....+.. T Consensus 175 ~~~~i~~~t~~~---------------------d~a~~l~Lt~~~-~a~v~~~g~~aet--------------~~~Al~a 218 (501) T protein:vir:10 175 TAAAISAVTGTN---------------------NLADELGLSAAA-GATLQAAGVAADT--------------PASAMNR 218 (501) T ss_pred cceeEEEeeccc---------------------cchhhhcccccC-ceeEEecCccccc--------------HHHHHHH Confidence 011111100000 000000000000 0000000000000 0000000 Q ss_pred HhcccCceEEEEeccccccccceeeeecCcccccccccccccccccccchhhhhhhhhcchhhcCccEEecccCCCchhH Q lcl|Aclame:pro 312 FFGRGSSQYIYATAQGWVDGFSGIISLAGGVSANEATTGGVGADPFIGAMMQGWGLFAERESIHVNLLIAGACAGEGDAF 391 (666) Q Consensus 312 ~~~~~~s~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ll~~p~~~~~~~~~ 391 (666) +. +.... | ..+..+.. .. T Consensus 219 ~~-~~~~~---------------------------------------------W----------y~f~~a~~------~~ 236 (501) T protein:vir:10 219 AV-GLSRN---------------------------------------------W----------ATFTTAWT------AV 236 (501) T ss_pred HH-hcccc---------------------------------------------e----------EEEEEEec------CC Confidence 00 00000 0 00111100 01 Q ss_pred HHHHHHHHHHhhccccEEEE--EcCCccccccccccCCHHHHHHHHhhccccchhhcccCcceEEEEcCeEEEecCcCCc Q lcl|Aclame:pro 392 STVQKHAVSIGDERQDCLVM--VSPPRSTVVNIPVTTAIDNLIAWREGSGNYNENNMNINTTYAVIDGNYKYQYDKYNDV 469 (666) Q Consensus 392 ~~v~~~~~~~~~~~~~~~~~--~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~p~~~~~d~~~~~ 469 (666) .+-..++..+++....++.+ .+.... ..+. ....++....+.. +.++..++|+. T Consensus 237 ~~~~la~A~wi~a~~~~f~~~~~~~~~~-~~~~---~~~~~i~~~l~~~----------~y~~t~~~y~~---------- 292 (501) T protein:vir:10 237 IADRLAFAAWNSGQAYKYMYVAPDLEAA-SIVT---NNAASFGAQVFAA----------PYQGTLPLYGD---------- 292 (501) T ss_pred hHHHHHHHHHHHhcCceEEEEEecCcce-eeec---ccchhHHHHHHhc----------CCCceEEECCC---------- Confidence 11223455555554433322 222111 1111 1111121111111 22344444431 Q ss_pred eeEechHHHHHHHHHhhhhcC--C--ceecccceecceeeeeeeeeecCChhHHhhhhhccceEEEEecCCe--EEEEcc Q lcl|Aclame:pro 470 NRWVPLAADIAGLCARTDAVS--Q--PWMSPAGYNRGQIMNVVKLAIEPRKAHRDRLYQAAINPVIGAGGEG--FILMGD 543 (666) Q Consensus 470 ~~~~p~s~~~ag~~a~~d~~~--g--~~~span~~~~~i~g~~~~~~~~~~~~~~~Ln~~gIn~i~~~~g~G--~~~wG~ 543 (666) -+|.+.+.|..+.+|.++ | -|+ +|.+. .|+ ..-.++..|.+.|..+|+|++..|.+.+ +.+|-. T Consensus 293 ---~~~~aa~~g~~as~nf~~~~g~~T~~---fkql~--~Gv--~a~~l~~t~a~al~~~~~N~y~~~~~~~~~~~~~~~ 362 (501) T protein:vir:10 293 ---QATAGAVMGYAASINFQLRNGRTVLA---FRQFN--AGV--PATAHDLPTANALRSNNYTYIGAYANAANNYTIAYD 362 (501) T ss_pred ---CCHHHHHHHHHHhcCcccCcceeeee---ecccC--CCc--CcccCCHHHHHHHHhcCCeEEEEEecccceeeEEEc Confidence 236778888888888654 2 222 33210 111 1234789999999999999998887544 778855 Q ss_pred eecCCCccccceeehhhHHHHHHHHHHHHHHHHhhC----CCCHHHHHHHHHHHHHHHHHHHhcCCee------------ Q lcl|Aclame:pro 544 KTATTVPSPFDRINVRRLFNMLKKNIGDSSKYKLFE----NNDNFTRASFRMEVSQYLSTIRSLGGIY------------ 607 (666) Q Consensus 544 rT~~~~~~~~~~i~vrR~~~~i~~~~~~~~~~~v~e----pn~~~~~~~i~~~i~~~l~~l~~~gal~------------ 607 (666) -+++++ |.||.+-+-.+|+++.++..+....-. |-|+.=...|+..|+.-|++-+++|.|. T Consensus 363 G~~sG~---~~wiD~~~g~dWl~~~iq~~l~~ll~~~~kIPyt~~G~~~l~a~i~~~l~~av~nG~Ia~Gv~l~~~q~~~ 439 (501) T protein:vir:10 363 GKLSGK---FLWVDTYLDQIYLNAELQRAEFEAMLAYNSLPYNEDGYTANYRAGVDVIDAAVTSGIIRAGVTLTNSQLQQ 439 (501) T ss_pred ceeecc---ceehhhHhhHHHHHHHHHHHHHHHHhcCCCcccCHHHHHHHHHHHHHHHHHHHhCcceecCcccCccccee Confidence 556653 567888888899999999888765433 4477888899999999999999999883 Q ss_pred -----------------eeEEEEcccC-CCHHHhhCCEEEEEEEEEecCCccEEEEEEEEee Q lcl|Aclame:pro 608 -----------------DFRVQCDTTN-NTPDVIDRNEFVASMFIKPAKSINYIMLNFTAVA 651 (666) Q Consensus 608 -----------------g~~v~~d~~~-n~~~~i~~G~~~~~i~~~p~~p~e~i~~~~~~~~ 651 (666) ||.+.++... .+++.-.+.-..+.+.+.--..+++|++-..... T Consensus 440 i~~~~g~~~~~~~v~~~Gyy~~~~~~~~~~~~R~~R~~p~~~~~y~~~gaIh~v~i~s~~v~ 501 (501) T protein:vir:10 440 IDAVAGVAGAGALVQTRGWYFLIGNPANPGQARQNRTSPACTLWYSDGGSIQELTIGSNAVI 501 (501) T ss_pred ecccccccccccceeccceEEeeCcccCChhhhhhcccCceEEEEEeCCceeEEEeeeeecC Confidence 3777777543 3444444555677777788888888877544333 No 67 >protein:vir:3636 Length: 501 # NCBI annotation: gp04 # Family: family:all:396 # MgeID: mge:75 # MgeName: Bcep781 # Cross-refs: genbank:acc:NP_705631;genbank:gi:23752316;genbank:GeneID:955753 Probab=76.67 E-value=0.13 Score=25.39 Aligned_cols=447 Identities=10% Similarity=0.005 Sum_probs=201.4 Q ss_pred Cce--ecCceEEEEecCCccccccCcCc-eEEEEeccCCCCCcCEEeCCHHHHHHHcCCcCCCchhHHHHHHHHH---hC Q lcl|Aclame:pro 1 MTL--LSPGFETKETTLSTTIVQSATGR-AALVGKFQWGPAFQIIQVTNEVELVNKFGQPDNNTADYFMSGANFL---QY 74 (666) Q Consensus 1 ~~~--~~PGVyvee~~~~~~i~~v~tsv-~~fvG~~~~Gpv~~p~~i~s~~~~~~~fG~~~~~~~~~~~~~~~f~---ng 74 (666) |-+ +.=.-+|+..+...+-.+.+-+. +-+++.-..=|+++...-+|..|-...|| ..+.++.+++.+|- |. T Consensus 1 m~~~~ip~s~iV~V~~~v~~~~~~~~~~~~lllt~~~~~~~~r~~~y~s~~~V~~~FG---~~S~ey~aA~~yFs~~~~q 77 (501) T protein:vir:36 1 MPTTTIPIDQIVQMLPGVIGAGGAPGRLTGLVLTQDTSVQPGQLADFFQETDVENWFG---ALSNEAKIADAYFPGIVNG 77 (501) T ss_pred CCcCCcccceEEEEeeeeccCCCcceeeeeEEEeccCCCCCcceeeecCHHHHHHhcC---CChHHHHHHHHHhhcccCC Confidence 877 44456666555544444444333 33555555558888888889999999999 67778888998886 22 Q ss_pred C---CeEEEEEcccCcccccccccccccceeeecccccccccccceeeeccccccccccccccccccceeEEeecccccc Q lcl|Aclame:pro 75 G---NDLRVVRVLNKEKAKNATALAGNIEFEITNEGSNYEVGDTIKIKHNRQDIETAGKVTKVDGDGKVKGVFIPTGKII 151 (666) Q Consensus 75 g---~~~~vvRv~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~ 151 (666) . +++||-|-.+..... ...++.+.. ...... .... +..+.. + ++. T Consensus 78 ~~~P~~l~igR~~~~a~~~--~l~g~~l~~---------------------~~~a~~---~~~s--g~l~vt-i---~g~ 125 (501) T protein:vir:36 78 GQLPYDLKFARYVAADAPA--SVYGIPLTG---------------------VTLAQL---QGYS--GTLTVT-T---AAQ 125 (501) T ss_pred CccccEEEEEeecCcCcce--eEeccchhh---------------------hhhhhc---ccee--EEEEEE-e---cce Confidence 2 589999975421110 000000000 000000 0000 000000 0 000 Q ss_pred ccccccceeeecccceeEEEeecccccceeeeeeeeeccceeeeeeccchhhccccc-eeeeeecccceeeeeecccccc Q lcl|Aclame:pro 152 AHAKAIGVYPELDGDWTAEFTSSSGNGSAALSVTKIVTDSGLLLTDLETSRANITNQ-TFLTKLQKYDMPAVSAIYAGEI 230 (666) Q Consensus 152 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~a~~~~~~~-~~~~~~~~~~~~~~~A~~~g~~ 230 (666) .......+.. .... .+. .......+... .....+.......+.....| T Consensus 126 ----~~~~~i~lS~------------------~ts~-~~v------A~~i~~al~~~~~tv~~d~~~~~f~i~s~t~G-- 174 (501) T protein:vir:36 126 ----HVSANISLAA------------------ATSF-ANA------ATLIEAAFTSPDFVVAYDALRNRFTVVTNATG-- 174 (501) T ss_pred ----eeeeeccccc------------------ccCH-HHH------HHHHhhhhcCcceEEEEcCcceeEEEEeccCC-- Confidence 0000000000 0000 000 00000000000 00000000000011100000 Q ss_pred ccceeeeeeccccccccccccccccccccccceeeeeeccCcCcccceeeecccccccceeeecccccccccccchhhhH Q lcl|Aclame:pro 231 GNSLEVEILARSAFKNTAPDLTMYPYGGERTAARNLIPYAPQNDNQYAFIVRRDGVVVESYVLSTLKGDKDVYGNSIYMD 310 (666) Q Consensus 231 gn~i~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~et~~ls~~~~~~~~~~~~~~~~ 310 (666) ...++.... .+. ++. T Consensus 175 -~~~~i~~~t-------------------------------------------~~~---------------------~ia 189 (501) T protein:vir:36 175 -TAAAISAVT-------------------------------------------GTN---------------------NFA 189 (501) T ss_pred -cceeeEeee-------------------------------------------ccc---------------------chh Confidence 000000000 000 000 Q ss_pred hHhc--ccCceEEEEeccccccccceeeeecCcccccccccccccccccccchhhhhhhhhcchh-hc-CccEEecccCC Q lcl|Aclame:pro 311 DFFG--RGSSQYIYATAQGWVDGFSGIISLAGGVSANEATTGGVGADPFIGAMMQGWGLFAERES-IH-VNLLIAGACAG 386 (666) Q Consensus 311 ~~~~--~~~s~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~-~~ll~~p~~~~ 386 (666) +.+. ......+. ......+ . +. ..+.++... .+ ..+..+... T Consensus 190 ~~l~Lt~~~~a~v~-~~g~~~e---------------t--------------~~--~al~a~~~~s~~Wy~f~~a~~~-- 235 (501) T protein:vir:36 190 DEIGLSAAAGATLQ-AAGVAAD---------------T--------------PA--SAMNRAVGLSRNWATFTTAWTA-- 235 (501) T ss_pred hhhcccccCcceEE-ecccccc---------------c--------------HH--HHHHHHHhccCceEEEEEecCC-- Confidence 0000 00000000 0000000 0 00 000000000 00 112222211 Q ss_pred CchhHHHHHHHHHHHhhccccEEEEEcCCccccccccccCCHHHHHHHHhhccccchhhcccCcceEEEEcCeEEEecCc Q lcl|Aclame:pro 387 EGDAFSTVQKHAVSIGDERQDCLVMVSPPRSTVVNIPVTTAIDNLIAWREGSGNYNENNMNINTTYAVIDGNYKYQYDKY 466 (666) Q Consensus 387 ~~~~~~~v~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~p~~~~~d~~ 466 (666) ..+-..++..++|....++.+.-.... ..........++....+.. +..|....|. + T Consensus 236 ----~~~~~la~A~wiea~~~~f~~~~~~~~--~~~~~~~~~~~i~~~l~~~----------~y~~t~~~y~------~- 292 (501) T protein:vir:36 236 ----VIADRLAFASWNSGQAYKYMYVAPDLE--AASIVSNNAASFGAQVFAA----------PYQGTLPLYG------D- 292 (501) T ss_pred ----ChHHHHHHHHHHhhcCceEEEEEecCc--hhhhhccchhhHHHHHHhc----------CCCcEEEEcC------C- Confidence 112233566666665554433211110 0011111112222222221 2233443332 1 Q ss_pred CCceeEechHHHHHHHHHhhhhcC--C--ceecccceecceeeeeeeeeecCChhHHhhhhhccceEEEEecC--CeEEE Q lcl|Aclame:pro 467 NDVNRWVPLAADIAGLCARTDAVS--Q--PWMSPAGYNRGQIMNVVKLAIEPRKAHRDRLYQAAINPVIGAGG--EGFIL 540 (666) Q Consensus 467 ~~~~~~~p~s~~~ag~~a~~d~~~--g--~~~span~~~~~i~g~~~~~~~~~~~~~~~Ln~~gIn~i~~~~g--~G~~~ 540 (666) ..+..++.|..+.+|.++ | -|+ +|.+. .|+ ..-.++..|.+.|..+|+|++..|.+ ..+.+ T Consensus 293 ------~~~~aa~~g~~as~nf~~~~g~~T~~---fkq~~--~Gi--~a~~l~~t~a~al~~~~~N~y~~~~~~~~~~~~ 359 (501) T protein:vir:36 293 ------QATAGAVMGYAASINFQLRNGRTVLA---FRQFN--AGV--PATVHDLPTANALRSNNYTYIGAYANAANNYTI 359 (501) T ss_pred ------CCHHHHHHHHHHhcCcccCcceeeee---ccccC--CCc--CcCcCCHHHHHHHHhcCCcEEEEEecccceeeE Confidence 125667788888887644 3 222 33220 111 12347899999999999999988764 34777 Q ss_pred EcceecCCCccccceeehhhHHHHHHHHHHHHHHHHhhC----CCCHHHHHHHHHHHHHHHHHHHhcCCee--------- Q lcl|Aclame:pro 541 MGDKTATTVPSPFDRINVRRLFNMLKKNIGDSSKYKLFE----NNDNFTRASFRMEVSQYLSTIRSLGGIY--------- 607 (666) Q Consensus 541 wG~rT~~~~~~~~~~i~vrR~~~~i~~~~~~~~~~~v~e----pn~~~~~~~i~~~i~~~l~~l~~~gal~--------- 607 (666) |-.-+++++ |.||.+-+-.+||++.+++.+....-. |.|+.=...|+..|+.-|++-+++|.|. T Consensus 360 ~~~G~~sG~---~~wiD~~~g~dWL~~~iq~~l~~ll~~~~KIPytd~G~~~l~a~i~~~l~~av~nG~I~~Gv~~~~~q 436 (501) T protein:vir:36 360 AYDGKLSGK---FLWVDTYLDQIYLNAELQRAEFEAMLAYNSLPYNEDGYTGLYRAGVDVIDAAVTSGIIRAGVTLTNSQ 436 (501) T ss_pred EEcCeeecc---chhhhHHHhHHHHHHHHHHHHHHHHhcCCCCccChhhHHHHHHHHHHHHHHHHhCceeecCCCCCccc Confidence 766666653 567888899999999999999875543 5578888899999999999999999882 Q ss_pred --------------------eeEEEEcccCCC-HHHhhCCEEEEEEEEEecCCccEEEEEEEEee Q lcl|Aclame:pro 608 --------------------DFRVQCDTTNNT-PDVIDRNEFVASMFIKPAKSINYIMLNFTAVA 651 (666) Q Consensus 608 --------------------g~~v~~d~~~n~-~~~i~~G~~~~~i~~~p~~p~e~i~~~~~~~~ 651 (666) ||.+.++...++ ++.-.+.-..+.+.+.--..+++|++-..... T Consensus 437 ~~~I~~~~g~~~~~~~v~~~Gyy~~~~~~~~~~~~R~~R~~p~~~~~y~~~gaIh~v~i~s~~v~ 501 (501) T protein:vir:36 437 LQQIDKAARVAGAGQLVQTRGWYFLIGDPANPGQARQNRTTPACTLWYSDGGSIQSLTIGSNAVI 501 (501) T ss_pred ceeecccccccccccceeccceEEeeCcccCChhhhhhcccCcEEEEEEeCCceeEEEeeeeeeC Confidence 477777754444 44444555677788888888888877544333 No 68 >protein:vir:78611 Length: 501 # NCBI annotation: BcepNY3gp03 # Family: family:all:396 # MgeID: mge:1854 # MgeName: BcepNY3 # Cross-refs: genbank:acc:YP_001294840;genbank:gi:149882903;genbank:GeneID:5291082 Probab=76.20 E-value=0.14 Score=25.30 Aligned_cols=453 Identities=10% Similarity=0.020 Sum_probs=199.7 Q ss_pred Cce--ecCceEEEEecCCccccccCcCc-eEEEEeccCCCCCcCEEeCCHHHHHHHcCCcCCCchhHHHHHHHHH----h Q lcl|Aclame:pro 1 MTL--LSPGFETKETTLSTTIVQSATGR-AALVGKFQWGPAFQIIQVTNEVELVNKFGQPDNNTADYFMSGANFL----Q 73 (666) Q Consensus 1 ~~~--~~PGVyvee~~~~~~i~~v~tsv-~~fvG~~~~Gpv~~p~~i~s~~~~~~~fG~~~~~~~~~~~~~~~f~----n 73 (666) |-+ +-=.-+|+..+...+-.+++-+- +-+++....=|+++....+|..|-...|| ..+.++.+++.+|- + T Consensus 1 m~~~~ip~s~iV~V~~~v~~~~~~~~~~~~lll~~~~~~~~~r~~~y~s~~~V~~~FG---~~S~ey~aA~~yFs~~~~q 77 (501) T protein:vir:78 1 MPTTTIPIDQIVQMLPGVIGAGGAPGRLTGLVLTQDTSIQPGQLADFFQKTDVENWFG---GLSNEAVIADAYFPGIVNG 77 (501) T ss_pred CCcCccccceEEEEeeecccCCCcceeeeeEEEecCCCCCccceeeecCHHHHHHhcC---CChHHHHHHHHHhhcCCCC Confidence 877 44456666555444433333332 33556556668888888889999999999 67778888999887 3 Q ss_pred C--CCeEEEEEcccCcccccccccccccceeeecccccccccccceeeeccccccccccccccccccceeEEeecccccc Q lcl|Aclame:pro 74 Y--GNDLRVVRVLNKEKAKNATALAGNIEFEITNEGSNYEVGDTIKIKHNRQDIETAGKVTKVDGDGKVKGVFIPTGKII 151 (666) Q Consensus 74 g--g~~~~vvRv~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~ 151 (666) - =+++||-|-....... ...++.+............ -.+.+.+. +............ + T Consensus 78 ~~~P~~l~igR~~~~a~~~--~l~g~~l~~~~la~~~~~~--G~l~iti~--------------g~~~~~~i~~S~~--t 137 (501) T protein:vir:78 78 GQLPYDLKFARYVAADAPA--SVYGIPLTGVTLTQLQGYS--GTLTVTTA--------------AQHVSSNISLAAA--T 137 (501) T ss_pred CcccceEEEEeecccCcce--eEeccceeccchhhhceee--eEEEEEec--------------cceeeeccccccc--c Confidence 2 2588999975532111 1111111000000000000 00111110 0000000000000 0 Q ss_pred ccccccceeeecccceeEEEeecccccceeeeeeeeeccceeeeeeccchhhccccceeeeeecccceeeeeeccccccc Q lcl|Aclame:pro 152 AHAKAIGVYPELDGDWTAEFTSSSGNGSAALSVTKIVTDSGLLLTDLETSRANITNQTFLTKLQKYDMPAVSAIYAGEIG 231 (666) Q Consensus 152 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~A~~~g~~g 231 (666) .+.. .+..+...+......+ ..+.......+.....|. T Consensus 138 -------s~~~-----------------vA~~i~~al~a~~~tv----------------~~ds~~~~f~its~t~G~-- 175 (501) T protein:vir:78 138 -------SFAN-----------------AATLIEAAFTSPDFVV----------------SYDALRNRFVVNTNATGT-- 175 (501) T ss_pred -------CHHH-----------------HHHHHHhhhcCcceEE----------------EEccccceEEEEeeecCC-- Confidence 0000 0000000000000000 000011111111111111 Q ss_pred cceeeeeeccccccccccccccccccccccceeeeeeccCcCcccceeeecccccccceeeecccccccccccchhhhHh Q lcl|Aclame:pro 232 NSLEVEILARSAFKNTAPDLTMYPYGGERTAARNLIPYAPQNDNQYAFIVRRDGVVVESYVLSTLKGDKDVYGNSIYMDD 311 (666) Q Consensus 232 n~i~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~et~~ls~~~~~~~~~~~~~~~~~ 311 (666) ..++........ .+..+. ..... ...+...|...|+ ....+.. T Consensus 176 -~~~i~~~t~~~~--~a~~l~-------------------Lt~~~-~a~v~~~g~~aet--------------~~~a~~a 218 (501) T protein:vir:78 176 -AAAISAVTGTNN--LADELG-------------------LSAAA-GASLQAAGVAADT--------------PASAMNR 218 (501) T ss_pred -ceeEEEEecccc--hhhhhc-------------------ccccC-ceeeEeccccccC--------------HHHHHHH Confidence 001111100000 000000 00000 0000000000000 0000000 Q ss_pred HhcccCceEEEEeccccccccceeeeecCcccccccccccccccccccchhhhhhhhhcchhhcCccEEecccCCCchhH Q lcl|Aclame:pro 312 FFGRGSSQYIYATAQGWVDGFSGIISLAGGVSANEATTGGVGADPFIGAMMQGWGLFAERESIHVNLLIAGACAGEGDAF 391 (666) Q Consensus 312 ~~~~~~s~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ll~~p~~~~~~~~~ 391 (666) ..+ ....+ ..+..+... . T Consensus 219 ~~~-~~~~W-------------------------------------------------------y~f~~a~~~------~ 236 (501) T protein:vir:78 219 AVG-LSRNW-------------------------------------------------------ATFTTAWTA------V 236 (501) T ss_pred HHh-ccCce-------------------------------------------------------EEEEEecCC------C Confidence 000 00000 001111110 1 Q ss_pred HHHHHHHHHHhhccccEEEE--EcCCccccccccccCCHHHHHHHHhhccccchhhcccCcceEEEEcCeEEEecCcCCc Q lcl|Aclame:pro 392 STVQKHAVSIGDERQDCLVM--VSPPRSTVVNIPVTTAIDNLIAWREGSGNYNENNMNINTTYAVIDGNYKYQYDKYNDV 469 (666) Q Consensus 392 ~~v~~~~~~~~~~~~~~~~~--~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~p~~~~~d~~~~~ 469 (666) .+-..++..+++....++.+ .|.... ..+.. ...++....+. -+..+..++|+. + T Consensus 237 ~~~~lalA~wiea~~~~f~~~~~~~~~~-~~~~~---~~~~i~~~l~a----------~~y~~t~~~y~~-----~---- 293 (501) T protein:vir:78 237 IADRLALASWNSGQAYKYMYVAPDLEPA-SIVTN---NSASFGAQVFA----------APYQGTLPLYGD-----Q---- 293 (501) T ss_pred HHHHHHHHHHHHhcCceEEEEEecCCcc-eeecc---cchhHHHHHhh----------cCCCceEEEcCC-----c---- Confidence 11233556666655443332 222111 11111 11111111111 122344444431 1 Q ss_pred eeEechHHHHHHHHHhhhhcCCc-eecccceecceeeeeeeeeecCChhHHhhhhhccceEEEEecCCe--EEEEcceec Q lcl|Aclame:pro 470 NRWVPLAADIAGLCARTDAVSQP-WMSPAGYNRGQIMNVVKLAIEPRKAHRDRLYQAAINPVIGAGGEG--FILMGDKTA 546 (666) Q Consensus 470 ~~~~p~s~~~ag~~a~~d~~~g~-~~span~~~~~i~g~~~~~~~~~~~~~~~Ln~~gIn~i~~~~g~G--~~~wG~rT~ 546 (666) .+.+.+.|.++.+|.++-. -..-.+|.+. .|+ ..-.++..|.+.|..+|+|++..|.+.+ +.+|-.-++ T Consensus 294 ----~~~aa~~g~~as~nf~~~~g~~T~~fkq~~--~Gv--~a~~l~~t~a~al~~~~~N~y~~~~~~~~~~~~~~~G~~ 365 (501) T protein:vir:78 294 ----ATAGAVMGYAASINFQLRNGRTVLAFRQFN--AGV--PATAHDLGTANALRSNNYTYIGAYANAANNYTIAYDGKL 365 (501) T ss_pred ----chHHHHHHHHHhcCcccCcceeeeeccccC--CCc--CcccCCHHHHHHHHhcCCeEEEEEecccceeeEEEcCee Confidence 2456778888888764421 0011123210 111 1234789999999999999998886544 778855566 Q ss_pred CCCccccceeehhhHHHHHHHHHHHHHHHHhhC----CCCHHHHHHHHHHHHHHHHHHHhcCCee--------------- Q lcl|Aclame:pro 547 TTVPSPFDRINVRRLFNMLKKNIGDSSKYKLFE----NNDNFTRASFRMEVSQYLSTIRSLGGIY--------------- 607 (666) Q Consensus 547 ~~~~~~~~~i~vrR~~~~i~~~~~~~~~~~v~e----pn~~~~~~~i~~~i~~~l~~l~~~gal~--------------- 607 (666) ++ .|.+|.+-+-.+|+++.++..+....-. |.|+.=...|+..|+.-|++-+++|.|. T Consensus 366 sG---~~~wiD~~~~~~Wl~~~iq~~l~~ll~~~~kIPyt~~G~~~l~a~v~~~l~~av~nG~I~~Gv~l~~~q~~~I~~ 442 (501) T protein:vir:78 366 SG---KFLWVDTYLDQIYLNAELQRAEFEAMLAYNSLPYNEDGYTALYRAGVDVIDAAVTSGIIRAGVTLTNSQLQQIDA 442 (501) T ss_pred ec---cceeehhhhhHHHHHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHHHHHHHHHhCceeecCCCCCCccceeecc Confidence 65 3566777777788888888888764422 5588888899999999999999999883 Q ss_pred --------------eeEEEEcccC-CCHHHhhCCEEEEEEEEEecCCccEEEEEEEEee Q lcl|Aclame:pro 608 --------------DFRVQCDTTN-NTPDVIDRNEFVASMFIKPAKSINYIMLNFTAVA 651 (666) Q Consensus 608 --------------g~~v~~d~~~-n~~~~i~~G~~~~~i~~~p~~p~e~i~~~~~~~~ 651 (666) ||.+.++... .+++...+.-..+.+.+.--..+++|++-..... T Consensus 443 ~~g~~~~~~~~~~~Gyy~~~~~~~~~~~~R~~R~~p~~~~~y~~~gaIh~v~i~s~~v~ 501 (501) T protein:vir:78 443 AAGVAGAGQLVQMRGWYFLIGDPANPGQARQNRTTPTCTLWYSDGGSIQELTIGSNAVI 501 (501) T ss_pred ccCccccccceeccceEEeeccccCChhhhhhcccCcEEEEEEeCCceeEEEeeeeecC Confidence 3777777543 3444444555677777777888888876543333 No 69 >protein:vir:94073 Length: 494 # NCBI annotation: hypothetical protein # Family: family:all:396 # MgeID: mge:1493 # MgeName: OP2 # Cross-refs: genbank:acc:YP_453619;genbank:gi:84662655;genbank:GeneID:5142583 Probab=54.67 E-value=0.5 Score=22.24 Aligned_cols=445 Identities=11% Similarity=0.021 Sum_probs=183.3 Q ss_pred CceecCceEEEEecCCccccccCcCc-eEEEEeccCCCCCcCEEeCCHHHHHHHcCCcCCCchhHHHHHHHHH----hC- Q lcl|Aclame:pro 1 MTLLSPGFETKETTLSTTIVQSATGR-AALVGKFQWGPAFQIIQVTNEVELVNKFGQPDNNTADYFMSGANFL----QY- 74 (666) Q Consensus 1 ~~~~~PGVyvee~~~~~~i~~v~tsv-~~fvG~~~~Gpv~~p~~i~s~~~~~~~fG~~~~~~~~~~~~~~~f~----ng- 74 (666) |-.+.=.-+|+..+...+-.+..-+- +-++.....=|+++....+|..|-...|| ..+.++.+++.+|- +- T Consensus 1 m~~ip~s~iV~V~~~v~~~~~~~~~f~~~l~~~~~~~~~~r~~~y~s~~~V~~~FG---~~S~ey~aA~~yFs~~~~q~p 77 (494) T protein:vir:94 1 MPNIPISQIVSINPQVVSAGGTQGTLDGLLLTQATGFPVTQPQVYFSAADVGTAFG---LTSDEYNAALVYFAGILGGGQ 77 (494) T ss_pred CCCCCcccEEEeeeeccccCCcccccceeEeecCccCCccceeeecCHHHHHHhcC---CChHHHHHHHHHhhhccCCCc Confidence 65554455666444433222222222 22444445567777778889999999999 67778888888886 21 Q ss_pred -CCeEEEEEcccCcccccccccccccceeeecccccccccccceeeeccccccccccccccccccceeEEeecccccccc Q lcl|Aclame:pro 75 -GNDLRVVRVLNKEKAKNATALAGNIEFEITNEGSNYEVGDTIKIKHNRQDIETAGKVTKVDGDGKVKGVFIPTGKIIAH 153 (666) Q Consensus 75 -g~~~~vvRv~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~ 153 (666) =+++||-|-.+..... ...+..... .... ++.-.+. ..++ .+|..+.......... T Consensus 78 ~P~~l~igR~~~~a~~~--~l~g~~~~~--tl~~----------~~~~~g~----l~it-i~g~~~~~~i~lS~~t---- 134 (494) T protein:vir:94 78 QPASLTIGRYASAATSA--AVFGAPLTL--SLAQ----------LQTLSGT----LIVT-TDTQRTSAAINLSGAT---- 134 (494) T ss_pred cccEEEEEeecCccccc--eeeccchhh--hHHh----------hhhcceE----EEEE-EcceEEEeeecccccC---- Confidence 2689999975421111 000000000 0000 0000000 0000 0000000000000000 Q ss_pred ccccceeeecccceeEEEeecccccceeeeeeeeeccceeeeeeccchhhcccc-ceeeeeecccceeeeeecccccccc Q lcl|Aclame:pro 154 AKAIGVYPELDGDWTAEFTSSSGNGSAALSVTKIVTDSGLLLTDLETSRANITN-QTFLTKLQKYDMPAVSAIYAGEIGN 232 (666) Q Consensus 154 a~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~a~~~~~~-~~~~~~~~~~~~~~~~A~~~g~~gn 232 (666) .....+.. ....+.. ......+.......+..... |. T Consensus 135 ----------------------s~~~vA~~-----------------i~~ai~~a~~~v~~d~~~~~f~v~s~tt---G~ 172 (494) T protein:vir:94 135 ----------------------SFANAASL-----------------MTSGFTTPNFAITYDAQRRRFVLSTTAT---GT 172 (494) T ss_pred ----------------------ChhhHHHH-----------------HhhhhccccceEEEcccCcEEEEEEccC---Cc Confidence 00000000 0000000 00000000000000000000 00 Q ss_pred ceeeeeeccccccccccccccccccccccceeeeeeccCcCcccceeeecccccccceeeecccccccccccchhhhHhH Q lcl|Aclame:pro 233 SLEVEILARSAFKNTAPDLTMYPYGGERTAARNLIPYAPQNDNQYAFIVRRDGVVVESYVLSTLKGDKDVYGNSIYMDDF 312 (666) Q Consensus 233 ~i~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~et~~ls~~~~~~~~~~~~~~~~~~ 312 (666) .-++... .+.+...+.+ T Consensus 173 ~s~is~~--------------------------------------------t~~~a~~l~l------------------- 189 (494) T protein:vir:94 173 TASVSAV--------------------------------------------TGTLADGVGL------------------- 189 (494) T ss_pred eeEEEEe--------------------------------------------ccchhhhhhh------------------- Confidence 0000000 0000000000 Q ss_pred hcccCceEEEEeccccccccceeeeecCcccccccccccccccccccchhhhhhhhhcchh-hc-CccEEecccCCCchh Q lcl|Aclame:pro 313 FGRGSSQYIYATAQGWVDGFSGIISLAGGVSANEATTGGVGADPFIGAMMQGWGLFAERES-IH-VNLLIAGACAGEGDA 390 (666) Q Consensus 313 ~~~~~s~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~-~~ll~~p~~~~~~~~ 390 (666) .......+... ....+.. .. .+.++... .+ ..+.++... + T Consensus 190 -t~~~~a~v~~~-g~~aet~-----------------------------~~--a~~a~~~~~~~Wy~f~~~~~~--~--- 231 (494) T protein:vir:94 190 -STASGAYVEGS-GLAADTA-----------------------------AS--ALDRLAASSSTWAIFTTAWAA--S--- 231 (494) T ss_pred -hccccceEeec-CcccccH-----------------------------HH--HHHHHHhccCceEEEEEecCC--C--- Confidence 00000000000 0000000 00 00000000 00 011222111 1 Q ss_pred HHHHHHHHHHHhhccccEEEE--EcCCccccccccccCCHHHHHHHHhhccccchhhcccCcceEEEEcCeEEEecCcCC Q lcl|Aclame:pro 391 FSTVQKHAVSIGDERQDCLVM--VSPPRSTVVNIPVTTAIDNLIAWREGSGNYNENNMNINTTYAVIDGNYKYQYDKYND 468 (666) Q Consensus 391 ~~~v~~~~~~~~~~~~~~~~~--~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~p~~~~~d~~~~ 468 (666) .+-..++.++.+....++.+ .+.... ..+. ....++....+.. +..|..+.|+. T Consensus 232 -~~~ilalA~wiea~~~~~~~~~~~~d~~-~~~~---~~~~~i~~~l~~~----------~y~~t~~~y~~--------- 287 (494) T protein:vir:94 232 -LSDRTALAQWTSDQVFRRIYAAWDQDAA-GLSV---NNVSSFGNIVKTT----------PFSNTIPVYGL--------- 287 (494) T ss_pred -HHHHHHHHHHHhhcCccEEEEEecCCcc-eeec---ccchhHHHHHHhh----------cCCceEEEcCC--------- Confidence 11223445555544332222 221111 1111 1112222222211 23344444432 Q ss_pred ceeEechHHHHHHHHHhhhhcCCceecccceecceeeeeeeee-ecCChhHHhhhhhccceEEEEecC--CeEEEEccee Q lcl|Aclame:pro 469 VNRWVPLAADIAGLCARTDAVSQPWMSPAGYNRGQIMNVVKLA-IEPRKAHRDRLYQAAINPVIGAGG--EGFILMGDKT 545 (666) Q Consensus 469 ~~~~~p~s~~~ag~~a~~d~~~g~~~span~~~~~i~g~~~~~-~~~~~~~~~~Ln~~gIn~i~~~~g--~G~~~wG~rT 545 (666) ..|.+.+.|..+.+|-++ .+.+..+..-.-..++. -.++..|.+.|..+|+|++..+.+ .-+.+|.+.+ T Consensus 288 ----~~~~aa~~g~~aa~~~~~----~~g~~T~~~k~q~~gi~~~~l~~t~a~al~~~~~N~y~~~~~~~~~~~~~~gg~ 359 (494) T protein:vir:94 288 ----LANAMIVLAWGASTNLQI----AEGRTTLALRSPVSSAGVRVDNLANANALLSNGYTYLGKYASATNTYTVTYNGA 359 (494) T ss_pred ----CChHHHHHHHHHhccccc----cCcceeEEeeccCCCCCCccCCHHHHHHHHhcCCeEEEEecccCceEEEecCce Confidence 114566777777777433 34444432100011222 336889999999999999998853 3467887777 Q ss_pred cCCCccccceeehhhHHHHHHHHHHHHHHHHhh----CCCCHHHHHHHHHHHHHHHHHHHhcCCee-------------- Q lcl|Aclame:pro 546 ATTVPSPFDRINVRRLFNMLKKNIGDSSKYKLF----ENNDNFTRASFRMEVSQYLSTIRSLGGIY-------------- 607 (666) Q Consensus 546 ~~~~~~~~~~i~vrR~~~~i~~~~~~~~~~~v~----epn~~~~~~~i~~~i~~~l~~l~~~gal~-------------- 607 (666) ++++ |.+|-.-+=.+|+++.++..+....- =|.|+.=...|+..|+.-|++-+++|.|. T Consensus 360 ~sG~---~~~id~~~~~~WL~~~iq~~l~~ll~~~~KIPytd~G~~~l~a~i~~~l~~av~nG~I~~Gv~~~~~q~~~i~ 436 (494) T protein:vir:94 360 IGGQ---FLWADTALGWIALRRNLQQALFETLLAYRSLPYNADGYNALYQGAQDVVSQFVAAGVIRAGVALSASQRAQID 436 (494) T ss_pred eccc---cceeeeeccHHHHHHHHHHHHHHHHHhCCCcccChhhHHHHHHHHHHHHHHHHhCceeecccccCcchhhhhh Confidence 7764 33332223345777777776655433 26688888999999999999999999994 Q ss_pred --------------eeEEEE-c-ccCCCHHHhhCCEEEEEEEEEecCCccEEEEEEEEee Q lcl|Aclame:pro 608 --------------DFRVQC-D-TTNNTPDVIDRNEFVASMFIKPAKSINYIMLNFTAVA 651 (666) Q Consensus 608 --------------g~~v~~-d-~~~n~~~~i~~G~~~~~i~~~p~~p~e~i~~~~~~~~ 651 (666) ||++.. + .+.+++.+.....+. +...--..+++|++...... T Consensus 437 ~~~G~~~~~~~~~kGyy~~~~~~~s~~~ra~R~~~~~~--~~y~~~GAIh~v~i~~~~v~ 494 (494) T protein:vir:94 437 QAAGVPISGDVVDKGWYLQVIDPITTTVRTDRGSPTVN--FWYCDGGSIQRVVVSATTVI 494 (494) T ss_pred hhhcCccccceeccceeeeccCCCChhhhhccccCCce--EEEEecCcEEEEEEeeEEeC Confidence 255543 3 344555444443333 33344778888888776666 Done!