Query lcl|Aclame:protein:vir:79798|NCBI_annot:tail sheath subunit|genbank:acc:YP_001429630;genbank:gi:156564120;genbank:GeneID:5525563 Match_columns 717 No_of_seqs 205 out of 726 Neff 6.9 Searched_HMMs 1612 Date Tue Dec 3 01:01:24 2013 Command /home/guerois/workspace/virfam/python/lib/hhsearch//hhsearch2 -i .//seq/seq_75 -d /home/guerois/workspace/virfam/python/profile_database/capsid_neck_tail.hhm -glob -cpu 7 -o .//seq/HHR/seq_75_vs_rec_db.hhr No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM 1 protein:vir:79798 Length: 717 100.0 8E-201 5E-204 1117.5 46.2 717 1-717 1-717 (717) 2 protein:vir:106427 Length: 679 100.0 1.7E-80 1E-83 457.9 47.0 623 5-717 1-665 (679) 3 protein:vir:101804 Length: 663 100.0 1.4E-79 8.7E-83 452.9 48.1 613 5-717 1-648 (663) 4 protein:vir:106984 Length: 743 100.0 6.4E-80 3.9E-83 454.8 45.5 658 1-717 1-732 (743) 5 protein:vir:5663 Length: 671 # 100.0 4.2E-79 2.6E-82 450.3 45.9 625 5-717 1-661 (671) 6 protein:vir:7206 Length: 659 # 100.0 4.2E-78 2.6E-81 444.8 50.9 620 5-717 1-646 (659) 7 protein:vir:101187 Length: 663 100.0 2.7E-78 1.7E-81 445.8 49.8 616 5-717 1-648 (663) 8 protein:vir:6894 Length: 660 # 100.0 1.3E-78 8E-82 447.6 47.3 606 1-717 1-646 (660) 9 protein:vir:103456 Length: 659 100.0 2E-78 1.3E-81 446.5 48.1 615 5-717 1-646 (659) 10 protein:vir:98263 Length: 664 100.0 2.9E-79 1.8E-82 451.2 43.3 574 1-717 1-650 (664) 11 protein:vir:80984 Length: 666 100.0 3.1E-78 1.9E-81 445.5 48.0 595 1-717 1-651 (666) 12 protein:vir:108052 Length: 660 100.0 1.1E-77 6.6E-81 442.6 47.9 593 5-717 1-647 (660) 13 protein:vir:104858 Length: 729 100.0 2E-78 1.2E-81 446.6 43.7 660 1-717 1-717 (729) 14 protein:vir:6594 Length: 666 # 100.0 4.3E-78 2.6E-81 444.8 45.3 615 5-717 1-651 (666) 15 protein:vir:100539 Length: 663 100.0 6.9E-78 4.3E-81 443.6 45.0 596 5-717 1-648 (663) 16 protein:vir:104477 Length: 749 100.0 6.7E-77 4.2E-80 438.2 49.4 665 1-717 1-739 (749) 17 protein:vir:80488 Length: 562 100.0 5E-75 3.1E-78 427.9 37.7 493 147-717 1-557 (562) 18 protein:vir:63742 Length: 562 100.0 2.5E-74 1.6E-77 424.1 38.8 511 147-717 1-557 (562) 19 protein:vir:80779 Length: 569 100.0 2.9E-72 1.8E-75 412.8 39.6 497 132-717 1-564 (569) 20 protein:vir:99306 Length: 587 100.0 1.9E-72 1.2E-75 413.8 38.1 512 132-717 1-582 (587) 21 protein:vir:95741 Length: 587 100.0 2.1E-71 1.3E-74 408.0 38.1 512 132-717 1-582 (587) 22 protein:vir:96586 Length: 587 100.0 1.1E-70 6.9E-74 404.1 38.4 494 147-717 1-582 (587) 23 protein:vir:98824 Length: 774 100.0 2.8E-69 1.7E-72 396.4 37.2 448 1-717 270-767 (774) 24 protein:vir:100829 Length: 607 100.0 8.4E-69 5.2E-72 393.8 35.4 544 132-717 1-596 (607) 25 protein:vir:79092 Length: 477 100.0 1.9E-66 1.2E-69 380.9 34.6 445 1-717 1-467 (477) 26 protein:vir:107865 Length: 477 100.0 1.7E-65 1E-68 375.7 35.5 452 1-717 1-467 (477) 27 protein:vir:102819 Length: 648 100.0 4.3E-59 2.7E-62 340.6 38.2 604 1-717 1-645 (648) 28 protein:vir:6079 Length: 396 # 100.0 7.1E-57 4.4E-60 328.4 34.2 364 1-717 1-383 (396) 29 protein:vir:5711 Length: 396 # 100.0 1.1E-56 7E-60 327.3 34.6 364 1-717 1-383 (396) 30 protein:vir:78206 Length: 390 100.0 3.3E-57 2E-60 330.3 30.9 359 1-717 1-378 (390) 31 protein:vir:103993 Length: 390 100.0 3.3E-57 2E-60 330.3 30.9 359 1-717 1-378 (390) 32 protein:vir:1845 Length: 392 # 100.0 1.6E-56 1E-59 326.5 31.6 361 1-717 1-380 (392) 33 protein:vir:98553 Length: 395 100.0 6.6E-56 4.1E-59 323.1 33.3 364 1-717 1-383 (395) 34 protein:vir:96740 Length: 388 100.0 4.2E-56 2.6E-59 324.2 31.9 362 1-717 1-377 (388) 35 protein:vir:2035 Length: 396 # 100.0 5.3E-56 3.3E-59 323.6 31.5 364 1-717 1-383 (396) 36 protein:vir:79181 Length: 390 100.0 7.5E-56 4.6E-59 322.8 30.9 359 1-717 1-378 (390) 37 protein:vir:100323 Length: 393 100.0 1.4E-55 8.6E-59 321.3 29.2 360 1-717 1-380 (393) 38 protein:vir:102957 Length: 437 100.0 9.6E-54 5.9E-57 311.3 37.0 422 1-716 1-437 (437) 39 protein:vir:5833 Length: 742 # 100.0 1.9E-51 1.2E-54 298.6 39.6 627 10-717 1-736 (742) 40 protein:vir:10336 Length: 386 100.0 7.5E-53 4.6E-56 306.4 22.5 361 305-717 1-379 (386) 41 protein:vir:79141 Length: 391 100.0 1E-52 6.2E-56 305.7 22.1 352 330-717 1-378 (391) 42 protein:vir:1172 Length: 391 # 100.0 7.8E-52 4.8E-55 300.8 22.8 351 304-717 1-379 (391) 43 protein:vir:105470 Length: 451 100.0 4E-48 2.5E-51 280.4 37.8 435 1-716 1-451 (451) 44 protein:vir:78986 Length: 436 100.0 6.6E-44 4.1E-47 257.3 37.3 416 1-716 3-436 (436) 45 protein:vir:103168 Length: 641 100.0 2.3E-44 1.4E-47 259.9 31.0 547 1-625 3-641 (641) 46 protein:vir:107310 Length: 581 100.0 1.2E-43 7.2E-47 256.0 31.0 514 169-717 1-566 (581) 47 protein:vir:7653 Length: 581 # 100.0 2.1E-42 1.3E-45 249.1 31.7 520 132-717 1-566 (581) 48 protein:vir:102359 Length: 356 99.9 1.9E-27 1.2E-30 167.0 28.6 325 277-715 1-356 (356) 49 protein:vir:101326 Length: 529 99.9 2.7E-22 1.7E-25 138.8 34.9 492 1-717 1-529 (529) 50 protein:vir:4517 Length: 498 # 99.6 5E-15 3.1E-18 99.0 27.9 447 1-717 1-495 (498) 51 protein:vir:489 Length: 498 # 99.6 4.4E-15 2.7E-18 99.3 27.5 447 1-717 1-495 (498) 52 protein:vir:1996 Length: 495 # 99.6 2E-14 1.2E-17 95.7 30.3 453 1-717 1-495 (495) 53 protein:vir:4463 Length: 498 # 99.6 8.9E-15 5.5E-18 97.6 27.6 441 1-717 1-495 (498) 54 protein:vir:80488 Length: 562 99.5 7.3E-15 4.5E-18 98.1 22.2 516 1-717 1-562 (562) 55 protein:vir:63742 Length: 562 99.5 4.4E-14 2.7E-17 93.8 25.0 440 1-585 1-562 (562) 56 protein:vir:99306 Length: 587 99.5 4.6E-15 2.9E-18 99.2 16.2 542 1-717 1-587 (587) 57 protein:vir:95741 Length: 587 99.4 5.6E-14 3.5E-17 93.2 20.9 545 1-717 1-587 (587) 58 protein:vir:3788 Length: 376 # 99.4 5.1E-14 3.2E-17 93.4 20.6 341 308-717 1-371 (376) 59 protein:vir:3751 Length: 376 # 99.4 1.1E-13 7.1E-17 91.5 21.5 342 308-717 1-371 (376) 60 protein:vir:78782 Length: 370 99.3 6.1E-13 3.8E-16 87.5 18.7 336 308-717 1-363 (370) 61 protein:vir:276 Length: 369 # 99.3 5E-12 3.1E-15 82.6 23.2 339 307-717 1-366 (369) 62 protein:vir:80779 Length: 569 99.2 2.3E-10 1.5E-13 73.4 29.3 531 1-717 1-569 (569) 63 protein:vir:100829 Length: 607 99.1 1.4E-10 8.4E-14 74.7 21.5 548 1-717 5-601 (607) 64 protein:vir:96586 Length: 587 99.0 7.3E-10 4.5E-13 70.7 23.7 482 1-551 1-587 (587) 65 protein:vir:102819 Length: 648 99.0 1.1E-10 6.9E-14 75.2 16.2 487 145-717 1-571 (648) 66 protein:vir:95263 Length: 450 98.0 9.2E-06 5.7E-09 48.2 22.2 383 308-717 1-449 (450) 67 protein:vir:80052 Length: 331 97.9 1.2E-05 7.6E-09 47.5 22.0 280 399-717 1-331 (331) 68 protein:vir:3165 Length: 426 # 97.8 4.5E-06 2.8E-09 49.9 15.2 379 308-717 1-426 (426) 69 protein:vir:5260 Length: 502 # 95.7 0.0016 9.7E-07 36.0 25.4 453 122-717 1-502 (502) 70 protein:vir:94073 Length: 494 40.9 0.95 0.00059 20.7 22.2 421 228-717 1-494 (494) 71 protein:vir:106730 Length: 501 37.7 1.1 0.00068 20.4 21.8 415 189-717 1-499 (501) 72 protein:vir:99586 Length: 507 36.1 1.2 0.00074 20.2 26.1 448 122-716 1-507 (507) 73 protein:vir:96104 Length: 504 29.0 1.7 0.0011 19.3 22.0 393 277-716 1-504 (504) 74 protein:vir:107720 Length: 515 27.9 1.8 0.0011 19.2 24.2 454 155-716 1-515 (515) No 1 >protein:vir:79798 Length: 717 # NCBI annotation: tail sheath subunit # Family: family:all:12069 # MgeID: mge:1874 # MgeName: 0305phi8-36 # Cross-refs: genbank:acc:YP_001429630;genbank:gi:156564120;genbank:GeneID:5525563 Probab=100.00 E-value=8.2e-201 Score=1117.54 Aligned_cols=717 Identities=100% Similarity=1.394 Sum_probs=693.4 Q ss_pred CCcchhcccCCceeEEEecCccccCcCCCCCcceeEEEEEeeccCCcccceecCHHHHHHhhCCcccccCCcchHHHHHH Q lcl|Aclame:pro 1 MAGFDQYQAIPGHNARFKDGNLNLKSDPNPRETESVVLLGTATDGPVMQPVRVTPETAYNIFGKVAHENGVYNGATLLPK 80 (717) Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~gp~~~~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~~ 80 (717) |+|||||||||||+++|||||||++|++||++|++++|||+|+||||||||.|+||.||+||||.+|||||||+|||+++ T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (717) T protein:vir:79 1 MAGFDQYQAIPGHNARFKDGNLNLKSDPNPRETESVVLLGTATDGPVMQPVRVTPETAYNIFGKVAHENGVYNGATLLPK 80 (717) T ss_pred CCchhhhhcCCCceeeeecCceecCCCCCccccceEEEEeeccCCcccCceeeChhHHHhhhhhhhhhcccccchhhhHH Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred HHHHHHccCCcEEEEEEecCcceeeeeecccccccccccCCcccceeecCcccceeeccCCcceeeeEEEeecceeecCc Q lcl|Aclame:pro 81 FEELWAAGNRDIRLMRTTGVNAVSSLLGTSYSKNSKEVAEDKLGGAQARGNVAATFTLPNGGIVEATFLLKARGVIIPPN 160 (717) Q Consensus 81 ~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (717) |||+|++|++||||||++|.+++++++++++++++++|+++|+|++++||||++||+||+||+++.++|+++||.++||+ T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (717) T protein:vir:79 81 FEELWAAGNRDIRLMRTTGVNAVSSLLGTSYSKNSKEVAEDKLGGAQARGNVAATFTLPNGGIVEATFLLKARGVIIPPN 160 (717) T ss_pred HHHHHhcCCcceEEEEecchhHHHHHhhcccccchhhHHHHhhcccccccceEEEEEcCCCceeeeeeeeeecceEeCCC Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred eeEeccccceeeccccccchhheeecCCcccccccceeehhhhhhhhheeeeeeeEeecccccccccCcccCCceEEEEE Q lcl|Aclame:pro 161 NYTLDVGTEEDMKAGTQPTFAQVLLNENVADMESEITVSYEFTYKDAQGETKTSEVLDNNTDKDGKPMIAKGADVTIKLE 240 (717) Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~gelld~~ie~~~~p~~~~~ag~i~a~r 240 (717) +||||++++|||++|++|+|+++++++|.+++...++++|+++|.+|+.+.+..|+||+|.|++++|+..+|++..+++| T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (717) T protein:vir:79 161 NYTLDVGTEEDMKAGTQPTFAQVLLNENVADMESEITVSYEFTYKDAQGETKTSEVLDNNTDKDGKPMIAKGADVTIKLE 240 (717) T ss_pred cceEeccChhhhhcCCCchhhhhhhccchhhccceeEEEEEEEeecccCcchhhhhhcCCCCCCCceeEEecccceeehh Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred eeccccceeeecCccccccchheeccceeEEEEecCccccceEEEEeecccccccccceEEEeeccccccceEEEEEecC Q lcl|Aclame:pro 241 HVALAGLKLYADGIEVVDAKAFTVAGDQLTIHSNSKMKLGASLEAQYAYNLVEVIQPVIELESIFGGGVYNDIMRKVESK 320 (717) Q Consensus 241 ~~~a~~a~~~~~g~~~~~s~~~g~~an~i~v~l~d~~~t~~~l~v~~a~~~~~~~~d~i~l~a~~~G~~GN~i~I~v~~~ 320 (717) |.+.-.-+++.+|++|.+.+.|-.+..++++|++..+..|++++..|++...+..|+++.|+++|+|+..|++++++++. T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~n~~~~~v~~~ 320 (717) T protein:vir:79 241 HVALAGLKLYADGIEVVDAKAFTVAGDQLTIHSNSKMKLGASLEAQYAYNLVEVIQPVIELESIFGGGVYNDIMRKVESK 320 (717) T ss_pred hhhhhhhHHhhcchhhhhhhheeeecceEEEEecCCcccchhhHHHHHhhHHHhhccceEEeecccCceeeeeeeEEecC Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred CceEEEEEeeeccCccceeeeeeeeccccchhHHHHHHHhhcCccceeEEeeeccccccccccccchhhhhhccCCccCc Q lcl|Aclame:pro 321 DGAVTVTITKPESKRGMISEDPLVFKSGDYTNFKMLVDAINNHPFNNVVRARTKPEFEATFTSTLQAAADAKFSGGKDEL 400 (717) Q Consensus 321 ~~~~t~~lt~~~~~~~~~~~~~~~l~~g~~~~~~~lv~~IN~~~~~~~~~a~~~~~~~~~l~s~~~~~~~~~ltgG~dG~ 400 (717) |...++++|+++++++.+++.++++++|+|..+..+++.||.+|.+.+..+...++.+..+...........|.||.||. T Consensus 321 D~~~~~~~t~~~~~~g~~~~~pl~~ts~dy~~~~~~vdgI~~~~~~~V~~~g~~s~a~a~~~~g~~s~d~a~f~Gg~dgl 400 (717) T protein:vir:79 321 DGAVTVTITKPESKRGMISEDPLVFKSGDYTNFKMLVDAINNHPFNNVVRARTKPEFEATFTSTLQAAADAKFSGGKDEL 400 (717) T ss_pred CceEEEEEecccccCcceeccccccccCceeeeeeeecccccCchhheeeeecccccceeeeecccCchhhccCCCcccc Confidence 99999999999999999999999999999999999999999999999998888888888888777777788899999999 Q ss_pred ccchhhhhhhcccccccccchhhhhhhhccccccceeEEeccccCCcccccccchhHHHHHHHHHHHhhcccceeEEecC Q lcl|Aclame:pro 401 SLDKEEMYKRLGGEKNEEGFVTKQGAYQYLENYEVDYVIPLGVHADTKLIGKYDDFAYQLALACAVMSHYNSVTIGIIPT 480 (717) Q Consensus 401 ~~~a~e~~~al~~~~~~~~~v~~~~~~~~le~~~vd~vi~~~~~a~t~~~~~~~~~~~~~a~~~~~~s~~~~~~i~ii~~ 480 (717) .+..+++|..+++.....+.+..+++|+.|++++||++++.+...+++..+..+++..++++||..++...+.++++++. T Consensus 401 ~~~~ee~Y~~lGgk~~d~g~lt~~aays~LE~~dVDlVil~ga~adtt~ga~~d~va~alad~caalSal~r~ai~VI~l 480 (717) T protein:vir:79 401 SLDKEEMYKRLGGEKNEEGFVTKQGAYQYLENYEVDYVIPLGVHADTKLIGKYDDFAYQLALACAVMSHYNSVTIGIIPT 480 (717) T ss_pred ccchhhhhccccccccccccccchhhhhhcCcceeEEEEecCccccccccchhhhHHHHHHHHHHHhhhccccceeeecc Confidence 99999999988888888888888899999999999999999988888888888889999999999999888999999999 Q ss_pred CCcchhhHHHHHHHHHHHHhhhhhhhhcccccccccchhhhhccccceeEEEeCcEEEEecccCcceeechhHHHHHHHh Q lcl|Aclame:pro 481 TTPSDISLAGVEEHVKKLENYANEFYMRDRFGNIIFDADRNKIDLGQFIEVVAGPDFIVRNTRLGQMASTPDASYIGMVS 560 (717) Q Consensus 481 ~~~~~~~~a~v~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~v~~p~~~v~~~~~~~~~~~p~ag~vAGl~A 560 (717) .++.+...+.++.+++++..+.+.++.++.......+......+.+.|..++++++.++.+...+.++.||+|++||+++ T Consensus 481 ~sp~D~~~AtVe~~~~kLs~~Aaa~~~~d~~~a~a~~~~~~~idis~y~~vv~~~~~iv~~~~~~~~~~p~AG~vAGldA 560 (717) T protein:vir:79 481 TTPSDISLAGVEEHVKKLENYANEFYMRDRFGNIIFDADRNKIDLGQFIEVVAGPDFIVRNTRLGQMASTPDASYIGMVS 560 (717) T ss_pred ccccccchhhHHHHHHHHHhhhhhhhhhcchhccccccccccccccceeeeeecceeEEEcCCCceeecCHHHHHHHHHh Confidence 88888888999999999998888889998888888888888888889999999999999998889999999999999999 Q ss_pred cCCcccccCCceecccccccccCCHHHHHHHHhCCcEEEEEEcCceEEEEeceecCCCCccceeeehhhhHHHHHHHHHH Q lcl|Aclame:pro 561 QLKTQSAPTNKPLPSVTALRYTYSANQLNRLTKARFATFKYKQDGSIGVVDAPTSAHAGSDYTRLSTARIVKEAVNAVRE 640 (717) Q Consensus 561 ~~gv~~SpaNk~L~gv~~l~~~lt~~e~d~L~~~GI~~ir~~~g~G~~v~g~rTt~s~ds~~~~I~vrR~~d~I~~~I~~ 640 (717) ++|+|+||+|++|.|+.++.++++++|++.|+++||+||++++++|+++||+||+++++++|+||++||++|+|+++|++ T Consensus 561 ~rGVwkSPANk~I~GVvgLa~~lT~sE~d~Ln~aGIntIr~~~GrGirVWGaRTtasd~sdWryInVRRl~D~Ie~sIr~ 640 (717) T protein:vir:79 561 QLKTQSAPTNKPLPSVTALRYTYSANQLNRLTKARFATFKYKQDGSIGVVDAPTSAHAGSDYTRLSTARIVKEAVNAVRE 640 (717) T ss_pred cCCcccccccceecccccCcccCCHHHHHHHhhCCeEEEEEeCCceEEEEeeeecCCCCcccceeehhhhHHHHHHHHHH Confidence 99999999999999999999999999999999999999999999999999999998777899999999999999999999 Q ss_pred HHHHhccccCCHHHHHHHHHHHHHHHHHHHhCCceecceeeeecChhhhhCCEEEEEEEEEccccccEEEEEEEEeC Q lcl|Aclame:pro 641 VADPFIGEPNDTGNRNALTAAVDKRLSKMIENKALLGFDFRLVVTPQQELLGEGSIELSLEAPNELRRLTTIVSLSA 717 (717) Q Consensus 641 ~~~~~IgepN~~~~~~~i~~~I~~fL~~L~~~GaI~G~~~~~~~t~~~i~~G~l~v~i~v~P~~p~e~I~v~i~~ta 717 (717) .++|||||||++.+|.+|++.|++||++||++|+|.||+|+++|+|+++..|+++++|.++|++|+|||+++++++| T Consensus 641 al~~yVgEPNd~~tr~~Ik~sI~afL~~L~r~GAI~GykvdvtnT~~di~~G~l~V~I~vaPv~PaEfI~ititITA 717 (717) T protein:vir:79 641 VADPFIGEPNDTGNRNALTAAVDKRLSKMIENKALLGFDFRLVVTPQQELLGEGSIELSLEAPNELRRLTTIVSLSA 717 (717) T ss_pred HHHHhccccCCHHHHHHHHHHHHHHHHHHHhcCceecceeeEecChhHhhCCEEEEEEEEEecCcccEEEEEEEEeC Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999 No 2 >protein:vir:106427 Length: 679 # NCBI annotation: gp18 tail sheath protein # Family: family:all:661 # MgeID: mge:1474 # MgeName: Aeh1 # Cross-refs: genbank:acc:NP_944106;genbank:gi:38640150;genbank:GeneID:2658188 Probab=100.00 E-value=1.7e-80 Score=457.92 Aligned_cols=623 Identities=12% Similarity=0.052 Sum_probs=318.2 Q ss_pred hhcccCCceeEEEecCccccCcCCCCCcceeEEEEEeeccCCcccceecC-HHHHHHhhCCcccccCCcchHHHHHHHHH Q lcl|Aclame:pro 5 DQYQAIPGHNARFKDGNLNLKSDPNPRETESVVLLGTATDGPVMQPVRVT-PETAYNIFGKVAHENGVYNGATLLPKFEE 83 (717) Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~gp~~~~~~~~-~~~~~~~fg~~~~~~~~~~~~~~~~~~~~ 83 (717) =+|- -||||||+.| +. ..+++++|++.++||.++|||+++|++|+ ..++++.||++.+.+ ++...+.+ T Consensus 1 ~~~~-~Pgvyv~e~~-~~---~~i~~~~t~~~~~vg~~~~gp~~~p~~i~s~~~~~~~fg~~~~~~---~~~~~~~~--- 69 (679) T protein:vir:10 1 MTLL-SPGVETKEIN-LQ---TTIARSSTGRAALVGKFNWGPAYQISQVVSEVDLVDKFGRPDDQT---ADSFFSGV--- 69 (679) T ss_pred Ccee-cCceEEEeec-CC---cccccCccccceeeecccCCCCccCEEecCHHHHHHHcCCccccc---chHHHHHH--- Confidence 3343 4999999997 44 58999999999999999999999999996 556689999986655 23334555 Q ss_pred HHHccCCcEEEEEEecCcceeeeeecccccccccccCCcccceeecCc---ccceeecc---CCcceeeeEEEeecceee Q lcl|Aclame:pro 84 LWAAGNRDIRLMRTTGVNAVSSLLGTSYSKNSKEVAEDKLGGAQARGN---VAATFTLP---NGGIVEATFLLKARGVII 157 (717) Q Consensus 84 ~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~---~~~~~~~~~~~~~~~~~~ 157 (717) +|.|||.+||++|++|.++.....+-.+... ..+..+|. +..++++. +++......-+.. T Consensus 70 ~f~~gg~~~~vvrv~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~v~~~~~~s~~~~~~~~~~~~----- 135 (679) T protein:vir:10 70 NFLNYGNDLRLVRVLNETKSRNSSALYQSLS---------YTITSPGVDYKVGDVVNVLQGGNVIATGKVTVVNA----- 135 (679) T ss_pred HHHhCCCeEEEEEccCccccccccccccccc---------ccccccccccccccceeeeeCCCcccceeEEEeec----- Confidence 5999999999999998876543222221110 01112221 22222221 1111100000111 Q ss_pred cCceeEe--ccccceeeccccccchhheeecCCcccccccceeehhhhhhhhheeeeeeeEeecccccccccCcccCC-c Q lcl|Aclame:pro 158 PPNNYTL--DVGTEEDMKAGTQPTFAQVLLNENVADMESEITVSYEFTYKDAQGETKTSEVLDNNTDKDGKPMIAKGA-D 234 (717) Q Consensus 158 ~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~gelld~~ie~~~~p~~~~~a-g 234 (717) +....++ .++.. ...+.+....... . ...... .....++.......-+.....+...-+.....+ . T Consensus 136 ~~~~~~~~v~~~~~-~~~a~~~~~~~~l----~---~a~~~~---~~~~t~~~g~~~~~~v~~v~~~~~~~~~~~~~a~~ 204 (679) T protein:vir:10 136 SGGIVAFYVPTAAI-IDKAKSLNDYPAL----D---NAWQIQ---FAAGGPGAGQAATATVVGINLDSTIFVPNDEYAMS 204 (679) T ss_pred cCceeeeeeccccc-cccccccccccee----c---ccceee---eeeccccccceeeeeeeeeccCCceeecccccccc Confidence 1111111 11000 0000000000000 0 000000 000001000000000000000000000000000 0 Q ss_pred eEEEEEeec-cccceeeecCccccccchheeccceeEEEEecCcccc------ceEEEEee-cc--cccccccceEEEee Q lcl|Aclame:pro 235 VTIKLEHVA-LAGLKLYADGIEVVDAKAFTVAGDQLTIHSNSKMKLG------ASLEAQYA-YN--LVEVIQPVIELESI 304 (717) Q Consensus 235 ~i~a~r~~~-a~~a~~~~~g~~~~~s~~~g~~an~i~v~l~d~~~t~------~~l~v~~a-~~--~~~~~~d~i~l~a~ 304 (717) .+..+-... .-+..+...+........-|...|.+.+.....+... ....+... .. ............+. T Consensus 205 ~i~~~~~~~~t~~~~~~~~~~~~~~A~~~g~~gn~i~v~~va~~~~~~~~~~~a~v~~~~~~~~~~~~~~~~~~~~~~~~ 284 (679) T protein:vir:10 205 AISERSETKRTFIDICEEMKVPAIVARYAGTYGDNIKVLMIAYKDYYKFNEAGKIVSVNTINPKVFPTGLDYGNVTPSSY 284 (679) T ss_pred ccccccccchhhhhhhhccccceeeeecccccCCcceEEEEeecccccccccccccccccccccccccccccccceeeee Confidence 000000000 0000011111101111111223333333321111100 00000000 00 00000000111111 Q ss_pred ccccccceE--EEEEecCC-ceEEEEEeeeccCccceeeeeeeeccccc--hhHHHHHHHhhcCccceeEEeeecccccc Q lcl|Aclame:pro 305 FGGGVYNDI--MRKVESKD-GAVTVTITKPESKRGMISEDPLVFKSGDY--TNFKMLVDAINNHPFNNVVRARTKPEFEA 379 (717) Q Consensus 305 ~~G~~GN~i--~I~v~~~~-~~~t~~lt~~~~~~~~~~~~~~~l~~g~~--~~~~~lv~~IN~~~~~~~~~a~~~~~~~~ 379 (717) .++...+.- .+.+.... ...++.++ ...++. .....++...-.++....+.+. .. T Consensus 285 ~~~~~~~~~~~~vvv~~~g~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~--- 344 (679) T protein:vir:10 285 LEFGPQNESQFAFIVFNNGVAVESKILS---------------TKPGDRDIYGTSIYINEYFGNGYSSFVQGV--AE--- 344 (679) T ss_pred cccccccccceeeEEecccccccceeee---------------cccccccccchhhhhhhhhcCcccceeeec--cc--- Confidence 111111111 11110000 00000000 001110 0011111111111111111110 00 Q ss_pred ccccccchhhhhhccCCccCcccch-hhhhhhcccccccccchhhhhhhhccccccceeEEeccccCCcccccccchhHH Q lcl|Aclame:pro 380 TFTSTLQAAADAKFSGGKDELSLDK-EEMYKRLGGEKNEEGFVTKQGAYQYLENYEVDYVIPLGVHADTKLIGKYDDFAY 458 (717) Q Consensus 380 ~l~s~~~~~~~~~ltgG~dG~~~~a-~e~~~al~~~~~~~~~v~~~~~~~~le~~~vd~vi~~~~~a~t~~~~~~~~~~~ 458 (717) ...........+.||.++..... .++. ...+++...+...+++++..+...+.. .....+.. T Consensus 345 --~~~~~~~~~~~~~gg~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~l~~p~~~~~~~--~~~~~v~~ 407 (679) T protein:vir:10 345 --SWPVGYTGVLAFGGGQSSNTDISAAEFM-------------KGWDMFADREHTDVNLFIAGAVAGEGA--QIASTVQK 407 (679) T ss_pred --cccccccceeeccCCccCCCccchhhhh-------------hhhhhhhcccccccceEEecCCCCCch--hhhHHHHH Confidence 00111122345677777643211 1111 112233444556677766544332211 11223455 Q ss_pred HHHHHHHHHhhcccceeEEecCCC------cchhhHHHHHHHHHHHHhhhhhhhhcccccccccchhhhhccccceeEEE Q lcl|Aclame:pro 459 QLALACAVMSHYNSVTIGIIPTTT------PSDISLAGVEEHVKKLENYANEFYMRDRFGNIIFDADRNKIDLGQFIEVV 532 (717) Q Consensus 459 ~~a~~~~~~s~~~~~~i~ii~~~~------~~~~~~a~v~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~v~ 532 (717) .+..||..+. .++.++..+. +.......+..+...+ ... ...........+.|+.++ T Consensus 408 ~l~~~~~~~~----~~~ai~d~p~~~~~~~~~~~~~~~~~~~r~~~---~~~----------~~~~~~~~~~~s~~~~~~ 470 (679) T protein:vir:10 408 AVVAIADERR----DCLVLISPPREYMINQPAASVVRKLVDWRRGV---NQA----------GISLDDNMNIGTTYASVD 470 (679) T ss_pred HHHHHHHhhC----CeEEEEeccccccccccccchHHHHHHHHhhc---ccc----------cchhhhhhccCcceEEEE Confidence 6667776542 3444442211 1111112222222111 000 000011112246789999 Q ss_pred eCcEEEEecccCcceeechhHHHHHHHhcC----CcccccCCceec---ccccccccCCHHHHHHHHhCCcEEEEEEcCc Q lcl|Aclame:pro 533 AGPDFIVRNTRLGQMASTPDASYIGMVSQL----KTQSAPTNKPLP---SVTALRYTYSANQLNRLTKARFATFKYKQDG 605 (717) Q Consensus 533 ~p~~~v~~~~~~~~~~~p~ag~vAGl~A~~----gv~~SpaNk~L~---gv~~l~~~lt~~e~d~L~~~GI~~ir~~~g~ 605 (717) +||++++++..+..+++||||++||++|++ |+|+||+|+++. |+.++...+++.|++.||++|||+|++++++ T Consensus 471 ~p~~~~~d~~~~~~~~~p~sg~vAGl~Ar~D~~~g~~~sPan~~~~~i~g~~~~~~~~~~~~~~~Ln~~gin~i~~~~g~ 550 (679) T protein:vir:10 471 GNYKYQYDKYNDVNRWIPLAADIAGLCARTDTVGQPWQSPAGFNRGQIVNVIKLAVDTRQAHRDEMYTNGINPIVGFAGQ 550 (679) T ss_pred ccceeeecccCCceEEechHHHHHHHHHHhhccCCcEECcCCeeeccccccccceeecChhhHHhhhhCCceEEEEecCC Confidence 999999999988899999999999999985 799999998754 5567888899999999999999999999999 Q ss_pred eEEEEeceecCCCCccceeeehhhhHHHHHHHHHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHhCCceecceeee--- Q lcl|Aclame:pro 606 SIGVVDAPTSAHAGSDYTRLSTARIVKEAVNAVREVADPFIGEPNDTGNRNALTAAVDKRLSKMIENKALLGFDFRL--- 682 (717) Q Consensus 606 G~~v~g~rTt~s~ds~~~~I~vrR~~d~I~~~I~~~~~~~IgepN~~~~~~~i~~~I~~fL~~L~~~GaI~G~~~~~--- 682 (717) |+++||+||+++++++|+||++||++++|+++|++.++|+|||||++.+|.+|++.|+.||++||++|+|.||+++. T Consensus 551 G~~~wG~rT~~~~~s~~~~i~vrR~~~~i~~si~~~~~~~v~epn~~~~~~~i~~~i~~fL~~l~~~gal~gf~v~~d~~ 630 (679) T protein:vir:10 551 GYILYGDKTASQAPTPFDRINVRRLFNLLKKSISESAKYKLFELNDAFTRSSFRSEVGSYLDTIRSLGGIYDFRVVCDES 630 (679) T ss_pred eEEEEcccccCCCCcccceEehhhHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeEEEEcCC Confidence 99999999998777899999999999999999999999999999999999999999999999999999999998743 Q ss_pred ecChhhhhCCEEEEEEEEEccccccEEEEEEEEeC Q lcl|Aclame:pro 683 VVTPQQELLGEGSIELSLEAPNELRRLTTIVSLSA 717 (717) Q Consensus 683 ~~t~~~i~~G~l~v~i~v~P~~p~e~I~v~i~~ta 717 (717) +|+++++++|+|+++|+++|++|+|||+|+|...+ T Consensus 631 ~nt~~~i~~G~~~~~i~~~p~~pae~i~~~~~~~~ 665 (679) T protein:vir:10 631 NNTPAVIDRNEFVATILIKPARSINYITLSFVATS 665 (679) T ss_pred CCCHHHhhCCeEEEEEEEEecCCccEEEEEEEEee Confidence 68889999999999999999999999999999987 No 3 >protein:vir:101804 Length: 663 # NCBI annotation: gp18 # Family: family:all:661 # MgeID: mge:1580 # MgeName: 31 # Cross-refs: genbank:acc:YP_238881;genbank:gi:66391956;genbank:GeneID:3416631 Probab=100.00 E-value=1.4e-79 Score=452.89 Aligned_cols=613 Identities=12% Similarity=0.071 Sum_probs=323.7 Q ss_pred hhcccCCceeEEEecCccccCcCCCCCcceeEEEEEeeccCCcccceecC-HHHHHHhhCCcccccCCcchHHHHHHHHH Q lcl|Aclame:pro 5 DQYQAIPGHNARFKDGNLNLKSDPNPRETESVVLLGTATDGPVMQPVRVT-PETAYNIFGKVAHENGVYNGATLLPKFEE 83 (717) Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~gp~~~~~~~~-~~~~~~~fg~~~~~~~~~~~~~~~~~~~~ 83 (717) =+| --||||||+.| +. +.+++++|++.++||.++|||+++|++|| ..+++++||++.+.+ ++..++.+ T Consensus 1 ~~~-~~Pgvyv~e~~-~~---~~i~~~~t~~~~~vG~~~~Gp~~~p~~v~~~~~~~~~fg~~~~~~---~~~~~~~~--- 69 (663) T protein:vir:10 1 MAL-LSPGIEMKETS-IN---STVVRSATGRAAIVGKFAWGPAYEVRQVTNEVELVDMFGSPDNVT---APYFMSAM--- 69 (663) T ss_pred Cce-ecCceEEEEec-CC---ccccccCcccceeEeecccCCCCccEEecCHHHHHHhcCCcCCcc---hhHHHHHH--- Confidence 233 24999999997 45 68999999999999999999999999996 566689999986655 33344554 Q ss_pred HHHccCCcEEEEEEecCcceeeeeecccccccccccCCcccceeecCcccceeeccCCcceeeeEEEeecceeecCceeE Q lcl|Aclame:pro 84 LWAAGNRDIRLMRTTGVNAVSSLLGTSYSKNSKEVAEDKLGGAQARGNVAATFTLPNGGIVEATFLLKARGVIIPPNNYT 163 (717) Q Consensus 84 ~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (717) ||.|||.+||++|+++.++.....+-.+....+...+.. .. .+...+++ .+.++.+.++..++ T Consensus 70 ~f~ngg~~~~vvRv~~~~~~~~a~~~~~~~~~~~~~~~~---~~---~~g~~i~v-----------~~~~~~~~~~~~~~ 132 (663) T protein:vir:10 70 NFLQYGNDLRLVRVIDMEKAKNASPLVNQVSVTITTEGQ---GY---TVGDAITV-----------KYNNATITEAGKVT 132 (663) T ss_pred HHHhCCCeEEEEEccCCccccccccccccceeEEeeccc---cc---cccccccc-----------ccccccccccccce Confidence 599999999999999765543222211111111000000 00 01111111 11111111111110 Q ss_pred e--ccccceeeccccccchhheeecCCcccccccceeehhhhhhhhheeeeeeeEeeccccccccc---C-cccCCceEE Q lcl|Aclame:pro 164 L--DVGTEEDMKAGTQPTFAQVLLNENVADMESEITVSYEFTYKDAQGETKTSEVLDNNTDKDGKP---M-IAKGADVTI 237 (717) Q Consensus 164 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~gelld~~ie~~~~p---~-~~~~ag~i~ 237 (717) - .++.......++. .... .+.. .. .+.. ...+... ++-.. ......+ . ....++..+ T Consensus 133 ~~~~~~~~~~v~~~ta---~~~~--~~~~-----v~-~~~~-~~~~~~~----~~s~~-s~~~~~a~~v~~v~~d~~~~v 195 (663) T protein:vir:10 133 AVDSDGKIKSLFVPTA---EIIA--KTRQ-----LG-TYPT-LGDNWRI----DVSGA-SGGSAAALALGNIVVDSGVTF 195 (663) T ss_pred eeecccceEEEeeccc---cccc--cccc-----cc-ccee-eccceee----Eeeec-cCccccccccceeccccceEE Confidence 0 0000000000000 0000 0000 00 0000 0000000 00000 0000000 0 000011111 Q ss_pred EE-Eeecc-ccce-----eeecCccccccchheeccceeEEEEecCccccceEEEEeecccccccccceEEEeecccccc Q lcl|Aclame:pro 238 KL-EHVAL-AGLK-----LYADGIEVVDAKAFTVAGDQLTIHSNSKMKLGASLEAQYAYNLVEVIQPVIELESIFGGGVY 310 (717) Q Consensus 238 a~-r~~~a-~~a~-----~~~~g~~~~~s~~~g~~an~i~v~l~d~~~t~~~l~v~~a~~~~~~~~d~i~l~a~~~G~~G 310 (717) .. +...+ ..+. ....+...++...-|.-+|.+++.+.+...........-.... ........-.....+... T Consensus 196 ~~~~~a~~~~t~~~~~~~~~~~~~~~i~A~~~G~~Gn~i~V~i~~~~~~~~~~~~~~~~~~-~~~~~~~~~v~~~~~~~~ 274 (663) T protein:vir:10 196 GNSEDAPAVMTSPAVMEKYAKFGMPLISAVYPGEIGSTVEVEIVSKTAFNSGAQQTIYPFG-GTRTSNARGVIQYGPMTD 274 (663) T ss_pred eeccccccccccccccccccccccceEEeccCCcccceeeeeeccccccccccccceeccc-ccccccccceeecccccc Confidence 10 00000 0000 0011111122333456667777776544322211111111000 000000000001111111 Q ss_pred ceEEEEEecCCce-EEEEEeeeccCccceeeeeeeecccc--chhHHHHHHHhhcCccceeEEeeeccccccccccccch Q lcl|Aclame:pro 311 NDIMRKVESKDGA-VTVTITKPESKRGMISEDPLVFKSGD--YTNFKMLVDAINNHPFNNVVRARTKPEFEATFTSTLQA 387 (717) Q Consensus 311 N~i~I~v~~~~~~-~t~~lt~~~~~~~~~~~~~~~l~~g~--~~~~~~lv~~IN~~~~~~~~~a~~~~~~~~~l~s~~~~ 387 (717) +...+.+...... ....+. ...++ +......+.+.-.+.......+... ..+... T Consensus 275 ~~~~~~~~~~~~~~~~~~~s---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~ 332 (663) T protein:vir:10 275 DQFAIIVRRDGIVVESTVLS---------------TRKGDRDVYGSNIFMDDYFRNGGSNFIFASSE-------GWPAGF 332 (663) T ss_pred cceeeEeecCCcceeeeccc---------------ccccccccccchhhhhhhhcCCcceEEEEeec-------ccCccc Confidence 2222211111110 000000 00011 0011111112111111111111111 111112 Q ss_pred hhhhhccCCccCcccch-hhhhhhcccccccccchhhhhhhhccccccceeEEeccccCCcccccccchhHHHHHHHHHH Q lcl|Aclame:pro 388 AADAKFSGGKDELSLDK-EEMYKRLGGEKNEEGFVTKQGAYQYLENYEVDYVIPLGVHADTKLIGKYDDFAYQLALACAV 466 (717) Q Consensus 388 ~~~~~ltgG~dG~~~~a-~e~~~al~~~~~~~~~v~~~~~~~~le~~~vd~vi~~~~~a~t~~~~~~~~~~~~~a~~~~~ 466 (717) .....+.+|.|+..... .++...+. .+...+...++++++.....+.. .....+...+..+|.. T Consensus 333 ~~~~~l~gg~d~~~~~~~~~~~~~~~-------------~l~~~~~~~~~~~i~~~~~~~~~--~~~~~v~~~l~~~a~~ 397 (663) T protein:vir:10 333 TGIIQLGGGTSANADVGADELIKGWD-------------LFSDREALHVNLMIAGACGSDGA--EIASTVQKYVVSLADD 397 (663) T ss_pred cceeEeccccCCccccchhhhHHHHH-------------hhhcccccceeEEEeccCCCCch--hhHHHHHHHHHHHHHh Confidence 22346778888754322 22322211 11223334555665543222111 1111234445556654 Q ss_pred HhhcccceeEEecCCCcc------hhhHHHHHHHHHHHHhhhhhhhhcccccccccchhhhhccccceeEEEeCcEEEEe Q lcl|Aclame:pro 467 MSHYNSVTIGIIPTTTPS------DISLAGVEEHVKKLENYANEFYMRDRFGNIIFDADRNKIDLGQFIEVVAGPDFIVR 540 (717) Q Consensus 467 ~s~~~~~~i~ii~~~~~~------~~~~a~v~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~v~~p~~~v~~ 540 (717) + +.++.++..+... ....+.+..+.+.+..... .........+.|..++|||+++++ T Consensus 398 ~----~~~~ai~d~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~s~~~~~~~p~~~~~d 460 (663) T protein:vir:10 398 R----QDCVAIVNPPAELMVGIPTSTAVKNIVEWRNGMTGSGE-------------VVDNNMNISSTYAFIIGNYKYQYD 460 (663) T ss_pred h----CCEEEEEecCcccccccccccchHHHHHHHHhcccccc-------------chhhhcccCccceEEEcCceEEec Confidence 3 2344444332211 1122233333322211000 001111223678899999999999 Q ss_pred cccCcceeechhHHHHHHHhcC----CcccccCCce---ecccccccccCCHHHHHHHHhCCcEEEEEEcC-ceEEEEec Q lcl|Aclame:pro 541 NTRLGQMASTPDASYIGMVSQL----KTQSAPTNKP---LPSVTALRYTYSANQLNRLTKARFATFKYKQD-GSIGVVDA 612 (717) Q Consensus 541 ~~~~~~~~~p~ag~vAGl~A~~----gv~~SpaNk~---L~gv~~l~~~lt~~e~d~L~~~GI~~ir~~~g-~G~~v~g~ 612 (717) +.....+++|||+++||++|++ |+|+||+|+. +.|+++++..+++.|++.||++|||||+++++ +|+++||+ T Consensus 461 ~~~~~~~~~p~sg~vAGl~Ar~D~~~g~~~sPan~~~~~i~g~~~~~~~~~~~e~~~Ln~~gin~i~~~~~~~G~~~wG~ 540 (663) T protein:vir:10 461 KYNDINRWVPLAADIAGLCAYTDQVSHPWMSPAGYRRGQIRNCIKLAIEPKQSMRDTMYQVAINPVTGFAGGDGFVLFGD 540 (663) T ss_pred ccCCceEEechhHHHHHHHHHhhccCCceEccCCceeccccccccceeecChhHHHHHhhCCceEEEEEeCCCcEEEEcc Confidence 9888899999999999999975 7999999986 55778888999999999999999999999987 79999999 Q ss_pred eecCCCCccceeeehhhhHHHHHHHHHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHhCCceecceee---eecChhhh Q lcl|Aclame:pro 613 PTSAHAGSDYTRLSTARIVKEAVNAVREVADPFIGEPNDTGNRNALTAAVDKRLSKMIENKALLGFDFR---LVVTPQQE 689 (717) Q Consensus 613 rTt~s~ds~~~~I~vrR~~d~I~~~I~~~~~~~IgepN~~~~~~~i~~~I~~fL~~L~~~GaI~G~~~~---~~~t~~~i 689 (717) ||+.+++++|+||++||++++|+++|++.++|+|||||++.+|.+|++.|+.||++||++|+|.||+++ .+|+++++ T Consensus 541 rT~~~~~s~~~~i~vrR~~~~i~~si~~~~~~~v~epn~~~l~~~i~~~i~~~L~~l~~~gal~g~~v~~d~~~nt~~~i 620 (663) T protein:vir:10 541 KMATQVPSPFDRINVRRLFNMLKKNIGDTSKYELFENNDAFTRQSFRMETSQYLDGIRSLGGCYDFRVVCDTTNNTPNVI 620 (663) T ss_pred cccCCCCcccceEehhhHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeEEEEcCCCCCHHHh Confidence 999877789999999999999999999999999999999999999999999999999999999999875 36888999 Q ss_pred hCCEEEEEEEEEccccccEEEEEEEEeC Q lcl|Aclame:pro 690 LLGEGSIELSLEAPNELRRLTTIVSLSA 717 (717) Q Consensus 690 ~~G~l~v~i~v~P~~p~e~I~v~i~~ta 717 (717) ++|+|+++|+++|++|+|||+++|..++ T Consensus 621 ~~G~~~~~i~~~p~~pae~i~~~~~~~~ 648 (663) T protein:vir:10 621 DRNEFVGTIYVKPPRSINYITLNMVATS 648 (663) T ss_pred hCCeEEEEEEEEecCCcceEEEEEEEee Confidence 9999999999999999999999999988 No 4 >protein:vir:106984 Length: 743 # NCBI annotation: contractile sheath protein gp18 # Family: family:all:661 # MgeID: mge:1459 # MgeName: S-PM2 # Cross-refs: genbank:acc:YP_195136;genbank:gi:58532913;uniprot:Q5GQN6;genbank:GeneID:3260481 Probab=100.00 E-value=6.4e-80 Score=454.77 Aligned_cols=658 Identities=14% Similarity=0.088 Sum_probs=322.6 Q ss_pred CCcchhcccCCceeEEEecCccccCcCCCCCcceeEEEEEeeccCCcccceecC-HHHHHHhhCCcccccCCcchHHHHH Q lcl|Aclame:pro 1 MAGFDQYQAIPGHNARFKDGNLNLKSDPNPRETESVVLLGTATDGPVMQPVRVT-PETAYNIFGKVAHENGVYNGATLLP 79 (717) Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~gp~~~~~~~~-~~~~~~~fg~~~~~~~~~~~~~~~~ 79 (717) |.. |-. |||+||+.|.+. ..++.++|++.++||.++|||+++|++|+ ..++++.||++.+.+ +++.+++ T Consensus 1 m~~---~~~-Pgvyv~e~~~~~---~~i~~~~t~~~~~vg~~~~Gp~~~p~~i~s~~~~~~~fG~~~~~~---~~~~~v~ 70 (743) T protein:vir:10 1 MAS---QVS-PGILIKERDLTN---AVVTGALQIRAAHASTFAKGPIGDIVNINTQKELVSVFGEPKEDN---AEDWMVA 70 (743) T ss_pred Ccc---ccC-CceEEEEecCCC---ceeccCCcceeEEEEeccCCCCCcCEEecCHHHHHHHcCCccCCc---chHHHHH Confidence 874 544 999999999888 89999999999999999999999999995 556689999985443 4455566 Q ss_pred HHHHHHHccCCcEEEEEEecCcceeeeeecccc----ccc--ccccCCcccceeecCcccceeecc--CCcc-eeeeE-- Q lcl|Aclame:pro 80 KFEELWAAGNRDIRLMRTTGVNAVSSLLGTSYS----KNS--KEVAEDKLGGAQARGNVAATFTLP--NGGI-VEATF-- 148 (717) Q Consensus 80 ~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~----~~~--~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-~~~~~-- 148 (717) + ||+|||.+||++|+.|+++.......... ... ........-.|..||.|.--+.+. +++. ...+. T Consensus 71 ~---~f~ngg~~~~vvrv~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~G~~gN~i~V~v~~~~~d~~~~~~~ 147 (743) T protein:vir:10 71 S---EFLNYGGRLAVVRAETTGVLNATTGSAGVLVKNRESWDAGSGNGEVFVARTAGSWGNSLMGVLVDRGADYIVTFAA 147 (743) T ss_pred H---HHHhCCceEEEEEccCccccccccccccccccccccccccccceeEEEEeeccccccceEEEEecCCCcceeeeec Confidence 5 59999999999999987643322111000 000 011222333466777766332221 1111 00000 Q ss_pred ----------EEe-ecceeecCcee--EeccccceeeccccccchhheeecCCcccccccceeehhhhhhhhheeeeeee Q lcl|Aclame:pro 149 ----------LLK-ARGVIIPPNNY--TLDVGTEEDMKAGTQPTFAQVLLNENVADMESEITVSYEFTYKDAQGETKTSE 215 (717) Q Consensus 149 ----------~~~-~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~ge 215 (717) +.+ .-+...+...+ ..+.........+.. +..-+ ...+.. ...+.-+.+............... T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~-~~~a~~~~~~~~~~~~~~~~~~~~ 224 (743) T protein:vir:10 148 TPTDTAVGTQLLFSYSGTLVTGEILSYDSATNTATITASGTL-TSQYL-LDTPEQ-GLIGSFTDNSTTEVGRTPGTYSNV 224 (743) T ss_pred cccccccceeeeecccccccccceeeeeecCcceeeeecccc-ceeee-cccccc-cccccccccccccccccccceeeE Confidence 000 00000000000 000000000000000 00000 000000 000000000000000000000011 Q ss_pred EeecccccccccCcc--cC----CceEEEEEeeccccceeeecCccc---cccchh-------eeccceeEEEEecCccc Q lcl|Aclame:pro 216 VLDNNTDKDGKPMIA--KG----ADVTIKLEHVALAGLKLYADGIEV---VDAKAF-------TVAGDQLTIHSNSKMKL 279 (717) Q Consensus 216 lld~~ie~~~~p~~~--~~----ag~i~a~r~~~a~~a~~~~~g~~~---~~s~~~-------g~~an~i~v~l~d~~~t 279 (717) ..+.....+..++.. .. ++.+. ...+........+... ...... +...+..++.+...... T Consensus 225 ~~~~~~~~~~~~tv~v~~~~~~vg~~v~---~~~~~~~~~~~~~~~~~v~~~~~~~~t~~~~~~~~~~~g~~~~~a~~~~ 301 (743) T protein:vir:10 225 PASGGTGTGATFNVVVADAGGGVGGSVV---VTLANPGTGYNQGETLTIASAATGDGTDILVTVATLSDGTIAITELKDW 301 (743) T ss_pred Eecccccccccccccccccccccccccc---cccccccceeeeccccccccccccccccchhheecccccceeeeecccc Confidence 111111111111100 00 11111 1111111111111000 000000 00011111111110000 Q ss_pred cceEEEEee--cccccccccceEEEeeccccccceEEEEEecCCceEEEEEeeeccCccceeeeeeeeccc--cc---hh Q lcl|Aclame:pro 280 GASLEAQYA--YNLVEVIQPVIELESIFGGGVYNDIMRKVESKDGAVTVTITKPESKRGMISEDPLVFKSG--DY---TN 352 (717) Q Consensus 280 ~~~l~v~~a--~~~~~~~~d~i~l~a~~~G~~GN~i~I~v~~~~~~~t~~lt~~~~~~~~~~~~~~~l~~g--~~---~~ 352 (717) .....+... ..............+...+..++.+.+.+-...+..+. ..+...+....+... .. .. T Consensus 302 ~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~d~~~v~v~~~~~~~~~-------~~~~v~~~~~~~s~~~~~~~~~~~ 374 (743) T protein:vir:10 302 YLNTEIGSTGIKLGDIGPRPGTSQFATDNGITDDQVHFAVIDTTGELTG-------TANTIVERLTYLSKLSDARSEENA 374 (743) T ss_pred cccchhhccccccccccccceeeeccccccccccceEEEEecCcceeee-------ccCceeEEEeeeecccccccccCc Confidence 000000000 00000000111111222344455555444332222110 000000000000000 00 00 Q ss_pred HHHHHHHhhcCccceeE--------Eee--ecccccccc------ccccchhhhhhccCCccCcccchhhhhhhcccccc Q lcl|Aclame:pro 353 FKMLVDAINNHPFNNVV--------RAR--TKPEFEATF------TSTLQAAADAKFSGGKDELSLDKEEMYKRLGGEKN 416 (717) Q Consensus 353 ~~~lv~~IN~~~~~~~~--------~a~--~~~~~~~~l------~s~~~~~~~~~ltgG~dG~~~~a~e~~~al~~~~~ 416 (717) ...+...++........ .+. ......... ...........+.||.|+....+.++...+. T Consensus 375 ~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gG~d~~~~~~~~~~~~~~---- 450 (743) T protein:vir:10 375 NIYYKNVINEQSAYLYHGNDAAVQIAASGEAWGQSSDQVLADAGTAFSRTTGYWVNLAGGNDDFAYDAGEFGAAMD---- 450 (743) T ss_pred ceeecceeccccceeeccCcccceeeeccccCccccceeeeecccccccccceEEEeecCccccccchhHHHHHHH---- Confidence 00000111111100000 000 000000000 0000111223456666665444333321110 Q ss_pred cccchhhhhhhhccccccceeEEeccccCCcccccccchhHHHHHHHHHHHhhcccceeEEecCCCcchhhHHHHHHHHH Q lcl|Aclame:pro 417 EEGFVTKQGAYQYLENYEVDYVIPLGVHADTKLIGKYDDFAYQLALACAVMSHYNSVTIGIIPTTTPSDISLAGVEEHVK 496 (717) Q Consensus 417 ~~~~v~~~~~~~~le~~~vd~vi~~~~~a~t~~~~~~~~~~~~~a~~~~~~s~~~~~~i~ii~~~~~~~~~~a~v~~~~~ 496 (717) .+...+...+++++..+...+. .....+..++..+|..+ +.++.++..+........... ... T Consensus 451 ---------~~~~~~~~~~~ll~~p~~~~~~---~~~~~v~~a~~~~~~~~----~~~~a~~d~p~~~~~~~~~~~-~~~ 513 (743) T protein:vir:10 451 ---------LFLDTEETEIDFVLMGGSMADE---ADTKSKATKVIAIAASR----KDALAFVSPHKGNQIASTGNV-ALS 513 (743) T ss_pred ---------HhhhccccCcceEEecCcccCc---cchHHHHHHHHHHHHhh----CCeEEEEecCCCccccccccc-ccc Confidence 1112233334444432211110 00112334444455432 123333322111100000000 000 Q ss_pred HHHhhhhhhhhcccccccccchhhhhccccceeEEEeCcEEEEecccCcceeechhHHHHHHHhcC----CcccccCCce Q lcl|Aclame:pro 497 KLENYANEFYMRDRFGNIIFDADRNKIDLGQFIEVVAGPDFIVRNTRLGQMASTPDASYIGMVSQL----KTQSAPTNKP 572 (717) Q Consensus 497 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~v~~p~~~v~~~~~~~~~~~p~ag~vAGl~A~~----gv~~SpaNk~ 572 (717) .. .........++....+.|+.+++||+.++++.....+++|||+++||++|++ |+|+||+|++ T Consensus 514 ~~------------~~~~~~~~~~~~~~~s~~~~~~~p~~~~~d~~~~~~~~~p~s~~~AGl~a~~D~~~g~~~span~~ 581 (743) T protein:vir:10 514 SA------------QQKENTIAFFSDLTSTSYAVFDSGYKYVYDRFTDKYRYIPCNGDVAGLCVQTSNQLDDWYSPAGLN 581 (743) T ss_pred cc------------ccchHHHHHHHhccCCeeEEEEccceeeeccccCceeEechhHHHHHHHHHhhccCCcEEccCCee Confidence 00 0000000112223456788999999999999988999999999999999985 8999999998 Q ss_pred eccc---ccccccCCHHHHHHHHhCCcEEEEEEcCceEEEEeceecCCCCccceeeehhhhHHHHHHHHHHHHHHhcccc Q lcl|Aclame:pro 573 LPSV---TALRYTYSANQLNRLTKARFATFKYKQDGSIGVVDAPTSAHAGSDYTRLSTARIVKEAVNAVREVADPFIGEP 649 (717) Q Consensus 573 L~gv---~~l~~~lt~~e~d~L~~~GI~~ir~~~g~G~~v~g~rTt~s~ds~~~~I~vrR~~d~I~~~I~~~~~~~Igep 649 (717) +.|+ .++...+++.|++.||++||+||++++++|+++||+||+.++|++|+||++||++++|+++|++.++|++||| T Consensus 582 ~~gi~g~~~~~~~~~~~~~~~Ln~~gIn~i~~~~~~G~~~wG~rT~~s~d~~~~~i~vrR~~~~i~~si~~~~~~~v~e~ 661 (743) T protein:vir:10 582 RGGILNAVKLAYNPNKADRDELYQNRINPVVSLRGQGITLFGDKTALAAPSAFDRINVRRLFLNLEKRARRLAEGVLFEQ 661 (743) T ss_pred eeeeeccccceecCChhHHHhHhhCCceEEEEecCCeEEEEcccccCCCCcccceEeehhhHHHHHHHHHHHHHHhccCC Confidence 6655 4566778999999999999999999999999999999998889999999999999999999999999999999 Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCceecceeee---ecChhhhhCCEEEEEEEEEccccccEEEEEEEEeC Q lcl|Aclame:pro 650 NDTGNRNALTAAVDKRLSKMIENKALLGFDFRL---VVTPQQELLGEGSIELSLEAPNELRRLTTIVSLSA 717 (717) Q Consensus 650 N~~~~~~~i~~~I~~fL~~L~~~GaI~G~~~~~---~~t~~~i~~G~l~v~i~v~P~~p~e~I~v~i~~ta 717 (717) |++.+|.+|++.|+.||++||++|+|.||+++. +|+++++.+|+++++|+++|++|+|||+|+|.... T Consensus 662 n~~~~~~~i~~~i~~fL~~l~~~gal~~~~V~~d~~~nt~~~i~~G~~~~~i~~~p~~pae~I~~~~~~~~ 732 (743) T protein:vir:10 662 NDATTRAGFSSALNSYLSEVQARRGVTDYLVICDESNNTPDIIDRNEFVAEVYVKPTRSINFITITFTATK 732 (743) T ss_pred CCHHHHHHHHHHHHHHHHHHHhcCceeeeEEEEcCCCCCHHHhhCCeEEEEEEEEecCCcceEEEEEEEee Confidence 999999999999999999999999999998754 68889999999999999999999999999999887 No 5 >protein:vir:5663 Length: 671 # NCBI annotation: tail sheath protein # Family: family:all:661 # MgeID: mge:119 # MgeName: KVP40 # Cross-refs: genbank:acc:NP_899602;genbank:gi:34419589;genbank:GeneID:2545776 Probab=100.00 E-value=4.2e-79 Score=450.29 Aligned_cols=625 Identities=11% Similarity=0.083 Sum_probs=316.9 Q ss_pred hhcccCCceeEEEecCccccCcCCCCCcceeEEEEEeeccCCcccceecC-HHHHHHhhCCcccccCCcchHHHHHHHHH Q lcl|Aclame:pro 5 DQYQAIPGHNARFKDGNLNLKSDPNPRETESVVLLGTATDGPVMQPVRVT-PETAYNIFGKVAHENGVYNGATLLPKFEE 83 (717) Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~gp~~~~~~~~-~~~~~~~fg~~~~~~~~~~~~~~~~~~~~ 83 (717) =+| --||||||+.+ +. .++++++|++.++||.++|||+++|++|+ ..++++.||++.+.+ ++...+++ T Consensus 1 ~~~-~~Pgvyv~e~~-~~---~~i~~v~t~~~~fvG~~~~Gp~~~p~~v~s~~~~~~~fG~~~~~~---~~~~~v~~--- 69 (671) T protein:vir:56 1 MTL-LSPGIENKEIN-LA---SAIGRAATGRAAMVGKFEWGPAYSITQVTSESDLVTIFGRPNDYT---AASFMTAN--- 69 (671) T ss_pred Cce-ecCceEEEeec-Cc---ccccccCcccceEEecccCCCCccCEEcCCHHHHHHHcCCcCCCc---chhHHHHH--- Confidence 223 35999999997 44 58999999999999999999999999995 566689999985544 34455665 Q ss_pred HHHccCCcEEEEEEecCcceeeeeecccccccccccCCcccceeecCcccceeeccCCcceeeeEEEeecceeecCceeE Q lcl|Aclame:pro 84 LWAAGNRDIRLMRTTGVNAVSSLLGTSYSKNSKEVAEDKLGGAQARGNVAATFTLPNGGIVEATFLLKARGVIIPPNNYT 163 (717) Q Consensus 84 ~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (717) ||.|||..||++|+++.++.....+..+....+.. +...+.+..++.+..+. + +....+...+ T Consensus 70 ~f~ngg~~~~vvrv~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~----~------~~~~~~~~~~ 132 (671) T protein:vir:56 70 NFLKYGNDLRLVRICDATTAQNATPLYNAVEYTIG-------ASNGCVVGDDITITYSG----V------GALTAKGKVL 132 (671) T ss_pred HHHhcCCeEEEEEecCccccccchhhccccccccc-------cCcceeeceeeeeecCc----c------cccccCccee Confidence 59999999999999987544322221111111100 11111111111111000 0 0001111111 Q ss_pred ecc-ccceeeccccccchhheeecCCcccccccceeehhhhhhhhheeeeeeeEeecccccccccCccc-CCceEEEEEe Q lcl|Aclame:pro 164 LDV-GTEEDMKAGTQPTFAQVLLNENVADMESEITVSYEFTYKDAQGETKTSEVLDNNTDKDGKPMIAK-GADVTIKLEH 241 (717) Q Consensus 164 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~gelld~~ie~~~~p~~~~-~ag~i~a~r~ 241 (717) ..+ ...+...+...+.+..+....... +-+.........+..... +.. ++..-.+.... ..... + T Consensus 133 ~~~~~a~~~~~~~~~~~~~~v~~~~~~~----~~~~~~~~t~~~~~~~~~---v~~--~~~~~~~~~~~~~~~~~----~ 199 (671) T protein:vir:56 133 EVDAGNNNAASKIFLPSAEIVAAAKSDG----NYPSVGTITLQPTQGDIA---LTN--IEIIDTGSVYFPNIELA----F 199 (671) T ss_pred EEeeeccceeeeeeccceeEEEeeeccc----ccccccccccccccccee---eee--ecccccceEEEeccccc----c Confidence 111 111111111122111111100000 000000000000000000 000 00000000000 00000 0 Q ss_pred eccccceeeecCccccccchheeccceeEEEEecCccccceEEEEeecccccccccceEEEeeccccccceEEEEEecCC Q lcl|Aclame:pro 242 VALAGLKLYADGIEVVDAKAFTVAGDQLTIHSNSKMKLGASLEAQYAYNLVEVIQPVIELESIFGGGVYNDIMRKVESKD 321 (717) Q Consensus 242 ~~a~~a~~~~~g~~~~~s~~~g~~an~i~v~l~d~~~t~~~l~v~~a~~~~~~~~d~i~l~a~~~G~~GN~i~I~v~~~~ 321 (717) ............... ...........++.......+..+.+... ...+...+.++.++.++|.+.+.+.... T Consensus 200 ~~~~~~~~~~~~~~~---~~~~~~~~~~~~~a~~~g~~g~~~~v~v~-----~~~~~~~~~a~~~~~~~~~~~~~~~~~~ 271 (671) T protein:vir:56 200 DALTAIETEGGALKY---ADLIEKQGFPRLSARYVGDFGDAISVEII-----NYADYQTAFAFAAGHTLGDIELPIYPDG 271 (671) T ss_pred ccccccccccccccc---hhhhhcccccccccccccccCcceEEEEe-----cccccccccccccceeeeeccccccccc Confidence 000000000000000 00000000000000001111112222111 0112233445555666666655543222 Q ss_pred ceEEEEEeee--------------ccCccceeeeee-eecccc--chhHHHHHHHhhcCccceeEEeeeccccccccccc Q lcl|Aclame:pro 322 GAVTVTITKP--------------ESKRGMISEDPL-VFKSGD--YTNFKMLVDAINNHPFNNVVRARTKPEFEATFTST 384 (717) Q Consensus 322 ~~~t~~lt~~--------------~~~~~~~~~~~~-~l~~g~--~~~~~~lv~~IN~~~~~~~~~a~~~~~~~~~l~s~ 384 (717) .......... ....+...+... ....++ ......++....+.+......+... .. T Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~------ 343 (671) T protein:vir:56 272 GTRSINLSSYFTFGPSNSNQYAVIVRVSGEVEEAFIVSTNPGDKDVNGQSIFIDEYFENSGSAYITAIAE--GW------ 343 (671) T ss_pred cccccccceeecccccccccceeEEeecCccceeEEEeecccccccchhhhhhhhhhcccCceEEEecCc--cc------ Confidence 1111100000 000011111100 000011 0111122333333332222222111 10 Q ss_pred cchhhhhhccCCccCcccchhhhhhhcccccccccchhhhhhhhccccccceeEEeccccCCcccccccchhHHHHHHHH Q lcl|Aclame:pro 385 LQAAADAKFSGGKDELSLDKEEMYKRLGGEKNEEGFVTKQGAYQYLENYEVDYVIPLGVHADTKLIGKYDDFAYQLALAC 464 (717) Q Consensus 385 ~~~~~~~~ltgG~dG~~~~a~e~~~al~~~~~~~~~v~~~~~~~~le~~~vd~vi~~~~~a~t~~~~~~~~~~~~~a~~~ 464 (717) ........+.||.++... ..++...+.. +...+...+++++......... ............+| T Consensus 344 ~~~~~~~~~~gg~d~~~~-~~~~~~~~~~-------------~~~~~~~~~~~~~a~~~~~~~~--~~~~~~~~~~~~~~ 407 (671) T protein:vir:56 344 KTESGAYNFGGGSDANAG-ADDWMFGLDM-------------LSDPEVLYTNLVIAGNAAAEEV--SIASTVQKYAIDSV 407 (671) T ss_pred CCccccccccCccccccc-hhHHHHHHHh-------------hhhccccceeEEEcCCCCCccc--hhHHHHHHHHHHHH Confidence 111223345666665421 2222211110 1111223344444332222111 00111112222233 Q ss_pred HHHhhcccceeEEecCCCc------chhhHHHHHHHHHHHHhhhhhhhhcccccccccchhhhhccccceeEEEeCcEEE Q lcl|Aclame:pro 465 AVMSHYNSVTIGIIPTTTP------SDISLAGVEEHVKKLENYANEFYMRDRFGNIIFDADRNKIDLGQFIEVVAGPDFI 538 (717) Q Consensus 465 ~~~s~~~~~~i~ii~~~~~------~~~~~a~v~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~v~~p~~~v 538 (717) ..+ .+..+.++..... .......+.++.+.. . ..+ ... ........+.|+.++|||+++ T Consensus 408 ~~~---~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~---~----~~~---~~~--~~~~~~~~s~~~~~~~p~~~~ 472 (671) T protein:vir:56 408 GNV---RQDCVVFVSPPQSLIVNKQAGTAVANIQGWRTGI---D----PTN---GQA--VVDNLNVSTTYAVIDGNYKYQ 472 (671) T ss_pred Hhh---cCCEEEEEeccccccccccccccHHHHHHHhhhc---c----ccc---hhh--hhhhccCCcceEEEecCceEE Confidence 221 1223333321110 011112222222211 0 000 000 001122346789999999999 Q ss_pred EecccCcceeechhHHHHHHHhcC----CcccccCCce---ecccccccccCCHHHHHHHHhCCcEEEEEEcCceEEEEe Q lcl|Aclame:pro 539 VRNTRLGQMASTPDASYIGMVSQL----KTQSAPTNKP---LPSVTALRYTYSANQLNRLTKARFATFKYKQDGSIGVVD 611 (717) Q Consensus 539 ~~~~~~~~~~~p~ag~vAGl~A~~----gv~~SpaNk~---L~gv~~l~~~lt~~e~d~L~~~GI~~ir~~~g~G~~v~g 611 (717) +++..+..+++|||+++||++|++ |+|+||+|+. |.|+.++...+++.|++.||++|||+|++++++|+++|| T Consensus 473 ~d~~~~~~~~~p~s~~~AGl~Ar~D~~~g~~~span~~~~~i~g~~~~~~~~~~~~~~~Ln~~gIn~i~~~~~~G~~~wG 552 (671) T protein:vir:56 473 YDKYNDRNRWVPLAGDIAGLCAYTDQVSQPWMSPAGFNRGQIKGVNRLAVDLRRAHRDALYQIGINPVVGFAGQGFVLYG 552 (671) T ss_pred ecccCCceeEechHHHHHHHHHHhhccCCcEECcCCceeccccccccceeecChhHHHHHhhCCceEEEEecCCeEEEEc Confidence 999988999999999999999975 7999999986 456778888999999999999999999999999999999 Q ss_pred ceecCCCCccceeeehhhhHHHHHHHHHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHhCCceecceee---eecChhh Q lcl|Aclame:pro 612 APTSAHAGSDYTRLSTARIVKEAVNAVREVADPFIGEPNDTGNRNALTAAVDKRLSKMIENKALLGFDFR---LVVTPQQ 688 (717) Q Consensus 612 ~rTt~s~ds~~~~I~vrR~~d~I~~~I~~~~~~~IgepN~~~~~~~i~~~I~~fL~~L~~~GaI~G~~~~---~~~t~~~ 688 (717) +||+++++++|+||++||++++|+++|++.++|++||||++.+|.+|++.|+.||++||++|+|.||+++ .+|++++ T Consensus 553 ~rT~~~~~~~~~~i~vrR~~~~i~~si~~~~~~~v~epn~~~~~~~i~~~i~~fL~~l~~~gal~g~~v~~d~~~nt~~~ 632 (671) T protein:vir:56 553 DKTATQQASAFDRINVRRLFNLLKKAISDAAKYRLFELNDEFTRSSFKSEIDAYLTNIQDLGGVYDFRVVCDETNNPGSV 632 (671) T ss_pred ceecCCCCcccceEehhhHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeEEEEcCCCCCHHH Confidence 9999877789999999999999999999999999999999999999999999999999999999999864 3678889 Q ss_pred hhCCEEEEEEEEEccccccEEEEEEEEeC Q lcl|Aclame:pro 689 ELLGEGSIELSLEAPNELRRLTTIVSLSA 717 (717) Q Consensus 689 i~~G~l~v~i~v~P~~p~e~I~v~i~~ta 717 (717) +++|+++++|+++|++|+|||+|+|.... T Consensus 633 i~~G~~~~~i~~~p~~Pae~I~~~~~~~~ 661 (671) T protein:vir:56 633 IDRNEFVASIYVKPAKSINFITLNFVATS 661 (671) T ss_pred hhCCeEEEEEEEEecCCcceEEEEEEEee Confidence 99999999999999999999999999888 No 6 >protein:vir:7206 Length: 659 # NCBI annotation: gp18 tail sheath protein # Family: family:all:661 # MgeID: mge:142 # MgeName: T4 # Cross-refs: genbank:acc:NP_049780;genbank:gi:9632592;genbank:GeneID:1258597 Probab=100.00 E-value=4.2e-78 Score=444.80 Aligned_cols=620 Identities=13% Similarity=0.049 Sum_probs=314.8 Q ss_pred hhcccCCceeEEEecCccccCcCCCCCcceeEEEEEeeccCCcccceecC-HHHHHHhhCCcccccCCcchHHHHHHHHH Q lcl|Aclame:pro 5 DQYQAIPGHNARFKDGNLNLKSDPNPRETESVVLLGTATDGPVMQPVRVT-PETAYNIFGKVAHENGVYNGATLLPKFEE 83 (717) Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~gp~~~~~~~~-~~~~~~~fg~~~~~~~~~~~~~~~~~~~~ 83 (717) -+| --||||||+.|.+. +.++. +|++.+++|.+++||+++|++|+ ..++++.||++.+.+- +...+. + T Consensus 1 ~~~-~~PgVyvee~~~~~---~~~~~-~ts~~~fvG~~~~Gp~~~p~~i~s~~~~~~~fG~~~~~~~---~~~~~~---~ 69 (659) T protein:vir:72 1 MTL-LSPGIELKETTVQS---TVVNN-STGTAALAGKFQWGPAFQIKQVTNEVDLVNTFGQPTAETA---DYFMSA---M 69 (659) T ss_pred Cce-ecCceEEEEecCCc---ccccC-CCcceEEEeecCCCCCcccEEecCHHHHHHHcCCcCCCCc---hhHHHH---H Confidence 233 35999999999887 55555 89999999999999999999995 6777999999866553 222344 4 Q ss_pred HHHccCCcEEEEEEecCcceeeeeecccccccc--cccCCcccceeecCcccceeeccCCcceeeeEEEeecceeecCce Q lcl|Aclame:pro 84 LWAAGNRDIRLMRTTGVNAVSSLLGTSYSKNSK--EVAEDKLGGAQARGNVAATFTLPNGGIVEATFLLKARGVIIPPNN 161 (717) Q Consensus 84 ~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (717) +|.|||.+||++|+++.++.....+........ .+......++...+.++.... |.-.....+...+....... T Consensus 70 ~f~ngg~~~~vvRv~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----g~~g~v~~~~~~~~~~~~~v 145 (659) T protein:vir:72 70 NFLQYGNDLRVVRAVDRDTAKNSSPIAGNIDYTISTPGSNYAVGDKITVKYVSDDI----ETEGKITEVDADGKIKKINI 145 (659) T ss_pred HHHhCCceEEEEEccCCcccccccccccccceeecccccccccceeeeeeeccccc----cccceEEEeeccccceeeee Confidence 589999999999999765443221111110000 000001111222222221111 10000000110010000000 Q ss_pred eEeccccceeeccccccchhheeecCCcccccccceeehhhhhhh---hheeeeeeeEeecccccccccCcccCCceEEE Q lcl|Aclame:pro 162 YTLDVGTEEDMKAGTQPTFAQVLLNENVADMESEITVSYEFTYKD---AQGETKTSEVLDNNTDKDGKPMIAKGADVTIK 238 (717) Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---A~~~~~~gelld~~ie~~~~p~~~~~ag~i~a 238 (717) .+-. .........+...-... . ....+.. ....++-..+.+.+ . .. .....+++. + T Consensus 146 ~t~~-------------~~a~~~~~~~~~~~~~~-~--~~~~~~~~~~~a~~~~~v~v~~~~-~-~~-~~~v~~~~~--a 204 (659) T protein:vir:72 146 PTGK-------------NYAKAKEVGEYPTLGSN-W--TAEISSSSSGLAAVITLGKIITDS-G-IL-LAEIENAEA--A 204 (659) T ss_pred cccc-------------ccccccccccccccccc-e--eeEEeeccccccceEEEEEeecCc-c-ee-eeeccccch--h Confidence 0000 00000000000000000 0 0000000 00000000000000 0 00 000000000 0 Q ss_pred EEeeccccceeeecCccccccchheeccceeEEEEecCccccceEEEEeecccccccccceEE-EeeccccccceEEEEE Q lcl|Aclame:pro 239 LEHVALAGLKLYADGIEVVDAKAFTVAGDQLTIHSNSKMKLGASLEAQYAYNLVEVIQPVIEL-ESIFGGGVYNDIMRKV 317 (717) Q Consensus 239 ~r~~~a~~a~~~~~g~~~~~s~~~g~~an~i~v~l~d~~~t~~~l~v~~a~~~~~~~~d~i~l-~a~~~G~~GN~i~I~v 317 (717) +..... ..+....+........-|...+.+++.+...........+.-.............. ...+.+..-+...+.+ T Consensus 205 ~~~~~~-~~~v~~~~~~~~~a~~~gt~g~~~tv~i~~~~~~~~~~~~~v~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~ 283 (659) T protein:vir:72 205 MTAVDF-QANLKKYGIPGVVALYPGELGDKIEIEIVSKADYAKGASALLPIYPGGGTRASTAKAVFGYGPQTDSQYAIIV 283 (659) T ss_pred hhcccc-cccccccccceeeeccccccccceeEEEccccccccceeeeeecccccccccccceeeeeeecccccccceee Confidence 000000 00111111100011112344455555543221111111111000000000000000 0000111111111111 Q ss_pred ecCC-ceEEEEEeeeccCccceeeeeeeeccccchhHH-HHHHHhhcCccceeEEeeeccccccccccccchhhhhhccC Q lcl|Aclame:pro 318 ESKD-GAVTVTITKPESKRGMISEDPLVFKSGDYTNFK-MLVDAINNHPFNNVVRARTKPEFEATFTSTLQAAADAKFSG 395 (717) Q Consensus 318 ~~~~-~~~t~~lt~~~~~~~~~~~~~~~l~~g~~~~~~-~lv~~IN~~~~~~~~~a~~~~~~~~~l~s~~~~~~~~~ltg 395 (717) .... ....+.+.. ..+.+.+.... .+...+...... .+.+..... +........+.+ T Consensus 284 ~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~~~~~-------~~~~~~~~~l~g 342 (659) T protein:vir:72 284 RRNDAIVQSVVLST-------------KRGEKDIYDSNIYIDDFFAKGGSE-YIFATAQNW-------PEGFSGILTLSG 342 (659) T ss_pred ecccceeeeeeeee-------------ccccccccchhhhhhhhhhcCCce-EEEEEeccc-------CCcccccccccc Confidence 0000 000011100 00111111111 111222222111 111111100 011112234566 Q ss_pred CccCccc-chhhhhhhcccccccccchhhhhhhhccccccceeEEeccccCCcccccccchhHHHHHHHHHHHhhcccce Q lcl|Aclame:pro 396 GKDELSL-DKEEMYKRLGGEKNEEGFVTKQGAYQYLENYEVDYVIPLGVHADTKLIGKYDDFAYQLALACAVMSHYNSVT 474 (717) Q Consensus 396 G~dG~~~-~a~e~~~al~~~~~~~~~v~~~~~~~~le~~~vd~vi~~~~~a~t~~~~~~~~~~~~~a~~~~~~s~~~~~~ 474 (717) |.++... ...++..+ ...+...+..++++++..+...... .....+...+..+|..+. .+ T Consensus 343 g~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~l~~p~~~~~~~--~~~~~v~~~l~~~~~~~~----~~ 403 (659) T protein:vir:72 343 GLSSNAEVTAGDLMEA-------------WDFFADRESVDVQLFIAGSCAGESL--ETASTVQKHVVSIGDARQ----DC 403 (659) T ss_pred cccccccccchhHHHH-------------HHHhhhccccceeEEEecCCCCcch--hhhHHHHHHHHHHHhhhC----CE Confidence 6655321 11112111 1122233445667665544322211 111224455666776542 23 Q ss_pred eEEecCCC------cchhhHHHHHHHHHHHHhhhhhhhhcccccccccchhhhhccccceeEEEeCcEEEEecccCccee Q lcl|Aclame:pro 475 IGIIPTTT------PSDISLAGVEEHVKKLENYANEFYMRDRFGNIIFDADRNKIDLGQFIEVVAGPDFIVRNTRLGQMA 548 (717) Q Consensus 475 i~ii~~~~------~~~~~~a~v~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~v~~p~~~v~~~~~~~~~~ 548 (717) +.++.... ........+..+...+.... .......+.|+.++|||++++++.....++ T Consensus 404 ~~~~d~~~~~~~~~~~~~~~~~~~~~r~~~~~~~----------------~~~~~~~s~~~~~~~p~~~~~d~~~~~~~~ 467 (659) T protein:vir:72 404 LVLCSPPRETVVGIPVTRAVDNLVNWRTAAGSYT----------------DNNFNISSTYAAIDGNHKYQYDKYNDVNRW 467 (659) T ss_pred EEEEcCccccccCCCcccCHHHHHHHHhhccccc----------------cccccccceeEEEEcCceeeccccCCceEE Confidence 33332211 01111222222222211100 011112357889999999999999999999 Q ss_pred echhHHHHHHHhc----CCcccccCCcee---cccccccccCCHHHHHHHHhCCcEEEEEEcCceEEEEeceecCCCCcc Q lcl|Aclame:pro 549 STPDASYIGMVSQ----LKTQSAPTNKPL---PSVTALRYTYSANQLNRLTKARFATFKYKQDGSIGVVDAPTSAHAGSD 621 (717) Q Consensus 549 ~p~ag~vAGl~A~----~gv~~SpaNk~L---~gv~~l~~~lt~~e~d~L~~~GI~~ir~~~g~G~~v~g~rTt~s~ds~ 621 (717) +|||+++||++|+ +|+|+||+|+++ .|+.++...+++.|++.||++|||||++++++|+++||+||+.+++++ T Consensus 468 ~p~sg~vAGl~Ar~D~~~G~~~span~~~~~i~g~~~~~~~~~~~~~~~Ln~~gIn~i~~~~g~G~~~wG~rT~~~~~s~ 547 (659) T protein:vir:72 468 VPLAADIAGLCARTDNVSQTWMSPAGYNRGQILNVIKLAIETRQAQRDRLYQEAINPVTGTGGDGYVLYGDKTATSVPSP 547 (659) T ss_pred echHHHHHHHHHHhhccCCcEEccCCeeeceeeccccccccCChhHHHHHhhCCceEEEEecCCeEEEEcccccCCCCcc Confidence 9999999999996 589999999974 456677888999999999999999999999999999999999777779 Q ss_pred ceeeehhhhHHHHHHHHHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHhCCceecceeee---ecChhhhhCCEEEEEE Q lcl|Aclame:pro 622 YTRLSTARIVKEAVNAVREVADPFIGEPNDTGNRNALTAAVDKRLSKMIENKALLGFDFRL---VVTPQQELLGEGSIEL 698 (717) Q Consensus 622 ~~~I~vrR~~d~I~~~I~~~~~~~IgepN~~~~~~~i~~~I~~fL~~L~~~GaI~G~~~~~---~~t~~~i~~G~l~v~i 698 (717) |+||++||++++|+++|++.++|++||||++.+|.+|+..|+.||++||++|+|++|.++. +|+++++++|+|+++| T Consensus 548 ~~~i~vrR~~~~i~~si~~~~~~~v~e~n~~~l~~~i~~~i~~fL~~l~~~gal~~~~V~~d~~~nt~~~i~~G~~~~~i 627 (659) T protein:vir:72 548 FDRINVRRLFNMLKTNIGRSSKYRLFELNNAFTRSSFRTETAQYLQGNKALGGIYEYRVVCDTTNNTPSVIDRNEFVATF 627 (659) T ss_pred cceEeehhHHHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCceeeEEEEEcCCCCCHHHhhCCeEEEEE Confidence 9999999999999999999999999999999999999999999999999999999998754 6888899999999999 Q ss_pred EEEccccccEEEEEEEEeC Q lcl|Aclame:pro 699 SLEAPNELRRLTTIVSLSA 717 (717) Q Consensus 699 ~v~P~~p~e~I~v~i~~ta 717 (717) +|+|++|+|||+|+|.... T Consensus 628 ~~~p~~pae~I~~~~~~~~ 646 (659) T protein:vir:72 628 YIQPARSINYITLNFVATA 646 (659) T ss_pred EEEecCCccEEEEEEEEee Confidence 9999999999999999887 No 7 >protein:vir:101187 Length: 663 # NCBI annotation: tail sheath protein # Family: family:all:661 # MgeID: mge:1582 # MgeName: 44RR2.8t # Cross-refs: genbank:acc:NP_932509;genbank:gi:37651635;genbank:GeneID:2610680 Probab=100.00 E-value=2.7e-78 Score=445.83 Aligned_cols=616 Identities=12% Similarity=0.070 Sum_probs=320.2 Q ss_pred hhcccCCceeEEEecCccccCcCCCCCcceeEEEEEeeccCCcccceecC-HHHHHHhhCCcccccCCcchHHHHHHHHH Q lcl|Aclame:pro 5 DQYQAIPGHNARFKDGNLNLKSDPNPRETESVVLLGTATDGPVMQPVRVT-PETAYNIFGKVAHENGVYNGATLLPKFEE 83 (717) Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~gp~~~~~~~~-~~~~~~~fg~~~~~~~~~~~~~~~~~~~~ 83 (717) =+|- -||||||+.| +. .++++++|++.++||.++|||+++|++|+ ..++++.||++.+.+ ++...++. T Consensus 1 ~~~~-~PgVyv~e~~-~~---~~i~~v~ts~~~fvG~~~~Gp~~~p~~i~s~~d~~~~fG~~~~~~---~~~~~v~~--- 69 (663) T protein:vir:10 1 MALL-SPGIEMKETS-IN---STVVRSATGRAAIVGKFAWGPAYEVRQVTNEVELVDMFGSPDNVT---APYFMSAM--- 69 (663) T ss_pred Ccee-cCceEEEEec-Cc---ccccccCccceeEEeeeccCCCCccEEecCHHHHHHHhCCcCccc---hhHHHHHH--- Confidence 2332 4999999996 44 57999999999999999999999999995 667799999986554 33344554 Q ss_pred HHHccCCcEEEEEEecCcceeeeeecccccccccccCCcccceeecCcccceeecc--CCcceeeeEEEeecceeecCce Q lcl|Aclame:pro 84 LWAAGNRDIRLMRTTGVNAVSSLLGTSYSKNSKEVAEDKLGGAQARGNVAATFTLP--NGGIVEATFLLKARGVIIPPNN 161 (717) Q Consensus 84 ~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 161 (717) ||.|||.+||++|+++.++.-...+-.+....+...+ ...+.+..++++. .+...+.. +-..+..+. T Consensus 70 ~f~ngg~~~~vvRv~~~~~~~~a~~~~~~~~~~~~~~------~~~~~~g~~~~v~~~~~~~~~~~-----~~~~~~~n~ 138 (663) T protein:vir:10 70 NFLQYGNDLRLVRVIDMEKAKNASPLVNQVSVTITTE------GQGYTVGDAITVKYNNATITEAG-----KVTAVDSDG 138 (663) T ss_pred HHHhCCCeEEEEEccCCcccccccccCCcceeeeecc------ccCcccccccccccccccccccc-----ceeeeccCC Confidence 5999999999999997654432211111111110000 0011111111111 11111000 000111100 Q ss_pred ----eEeccccceeeccccccchhheeecCCcccccccceeehh-hhhhhh---heee-eeeeEeecccccccccCcccC Q lcl|Aclame:pro 162 ----YTLDVGTEEDMKAGTQPTFAQVLLNENVADMESEITVSYE-FTYKDA---QGET-KTSEVLDNNTDKDGKPMIAKG 232 (717) Q Consensus 162 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~A---~~~~-~~gelld~~ie~~~~p~~~~~ 232 (717) .++.... ..+............. ...+++.-. ....++ ..++ .++-+.. ..+ ..+..... T Consensus 139 ~~~~v~~~~a~---~~~~~~~v~~~~~~~~-----~~~~~~~~~~~~~~~~~~v~~vv~~~~~~~~-~~~--~a~~~~~~ 207 (663) T protein:vir:10 139 KIKSLFVPTAE---IIAKTRQLGTYPTLGD-----NWRIDVSGASGGSAAALALGNIVVDSGVTFG-NSE--DAPAVMTS 207 (663) T ss_pred ceEEEEecccc---ccccccccceeeeccc-----cceeEeeeccccccccccccceecccceeeE-eec--cccccccc Confidence 0000000 0000000000000000 000000000 000000 0000 0000000 000 00000000 Q ss_pred CceEEEEEeeccccceeeecCccccccchheeccceeEEEEecCccccceEEEEeecccccccccceEEEeeccccccce Q lcl|Aclame:pro 233 ADVTIKLEHVALAGLKLYADGIEVVDAKAFTVAGDQLTIHSNSKMKLGASLEAQYAYNLVEVIQPVIELESIFGGGVYND 312 (717) Q Consensus 233 ag~i~a~r~~~a~~a~~~~~g~~~~~s~~~g~~an~i~v~l~d~~~t~~~l~v~~a~~~~~~~~d~i~l~a~~~G~~GN~ 312 (717) . . ... . ....+...++...-|...|.+.+.+.+.........+.-..... ...........+....... T Consensus 208 ~----~--~~~---~-~~~~~~~~~~a~~~G~~Gn~i~v~i~~~~~~~~~~~~~v~~~~~-~~~~~~~~~~~~~~~~~~~ 276 (663) T protein:vir:10 208 P----A--VME---K-YAKFGMPLVSAVYPGEIGSTVEVEIVSKTAFNSGAQQTIYPFGG-TRTSNARGVIQYGPMTDDQ 276 (663) T ss_pred c----c--hhh---h-cccccceeeeeecccccccceeEEeccccccccccccccccccc-ccccccceeeeeccccccc Confidence 0 0 000 0 00000001122333556677777665443222111111000000 0000000000000111111 Q ss_pred EEEEEecCCce-EEEEEeeeccCccceeeeeeeeccccchhHHH-HHHHhhcCccceeEEeeeccccccccccccchhhh Q lcl|Aclame:pro 313 IMRKVESKDGA-VTVTITKPESKRGMISEDPLVFKSGDYTNFKM-LVDAINNHPFNNVVRARTKPEFEATFTSTLQAAAD 390 (717) Q Consensus 313 i~I~v~~~~~~-~t~~lt~~~~~~~~~~~~~~~l~~g~~~~~~~-lv~~IN~~~~~~~~~a~~~~~~~~~l~s~~~~~~~ 390 (717) +.+.+...... .+..++... +...+..... +...+.+.. ..+..+.... .+...... T Consensus 277 ~~~~~~~~~~~~~~~~~s~~~-------------~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-------~~~~~~~~ 335 (663) T protein:vir:10 277 FAIIVRRDGIVVESTVLSTRK-------------GDRDVYGSNIFMDDYFRNGG-SNFIFASSEG-------WPAGFTGI 335 (663) T ss_pred eeEEEecCCcceeeeeeeecc-------------cccccchhhhhhhhhhccCc-ceEEEEeecc-------cCccccce Confidence 11111111100 000000000 0000011111 111111111 1222221111 01111223 Q ss_pred hhccCCccCcccch-hhhhhhcccccccccchhhhhhhhccccccceeEEeccccCCcccccccchhHHHHHHHHHHHhh Q lcl|Aclame:pro 391 AKFSGGKDELSLDK-EEMYKRLGGEKNEEGFVTKQGAYQYLENYEVDYVIPLGVHADTKLIGKYDDFAYQLALACAVMSH 469 (717) Q Consensus 391 ~~ltgG~dG~~~~a-~e~~~al~~~~~~~~~v~~~~~~~~le~~~vd~vi~~~~~a~t~~~~~~~~~~~~~a~~~~~~s~ 469 (717) ..+.||.|+..... .++...+. .+...+...++++++........ .....+...+..+|..+ T Consensus 336 ~~l~gg~d~~~~~~~~~~~~~~~-------------~l~~~~~~~~~~~i~~~~~~~~~--~~~~~v~~al~~~a~~~-- 398 (663) T protein:vir:10 336 IQLGGGTSANADVGADELIKGWD-------------LFSDREALHVNLMIAGACGSDGA--EIASTVQKYVVSLADDR-- 398 (663) T ss_pred eEcccccCCCccccchhhHHHHH-------------hhhcccccceeEEEeccCCCCch--hhHHHHHHHHHHHHHhh-- Confidence 46778888754322 23322211 12223445566666543222111 11112344455566543 Q ss_pred cccceeEEecCCCcc------hhhHHHHHHHHHHHHhhhhhhhhcccccccccchhhhhccccceeEEEeCcEEEEeccc Q lcl|Aclame:pro 470 YNSVTIGIIPTTTPS------DISLAGVEEHVKKLENYANEFYMRDRFGNIIFDADRNKIDLGQFIEVVAGPDFIVRNTR 543 (717) Q Consensus 470 ~~~~~i~ii~~~~~~------~~~~a~v~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~v~~p~~~v~~~~~ 543 (717) +.++.++..+... ......+..+.+.+..... .........+.|..++|||++++++.. T Consensus 399 --~~~~ai~d~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~s~~~~l~~P~~~~~d~~~ 463 (663) T protein:vir:10 399 --QDCVAIVNPPAELMVGIPTSTAVKNIVEWRNGMTGSGE-------------VVDNNMNISSTYAFIIGNYKYQYDKYN 463 (663) T ss_pred --CCEEEEEecCcccccccccccchHHHHHHHHhcccccc-------------chhhccccCcceEEEEccceEEecccC Confidence 2345555332211 1111222222221110000 000112234678999999999999998 Q ss_pred CcceeechhHHHHHHHhcC----CcccccCCce---ecccccccccCCHHHHHHHHhCCcEEEEEEcC-ceEEEEeceec Q lcl|Aclame:pro 544 LGQMASTPDASYIGMVSQL----KTQSAPTNKP---LPSVTALRYTYSANQLNRLTKARFATFKYKQD-GSIGVVDAPTS 615 (717) Q Consensus 544 ~~~~~~p~ag~vAGl~A~~----gv~~SpaNk~---L~gv~~l~~~lt~~e~d~L~~~GI~~ir~~~g-~G~~v~g~rTt 615 (717) +..+++|||+++||++|++ |+|+||+|+. +.|+.+++..+++.|++.||++|||||+++++ +|+++||+||+ T Consensus 464 ~~~~~~p~s~~vAGl~Ar~D~~~g~~~sPan~~~~~i~g~~~~~~~~~~~~~~~Ln~~gin~i~~~~~~~G~~~wG~rT~ 543 (663) T protein:vir:10 464 DINRWVPLAADIAGLCAYTDQVSHPWMSPAGYRRGQIRNCIKLAIEPKQSMRDTMYQVAINPVTGFAGGDGFVLFGDKMA 543 (663) T ss_pred CceEEechhHHHHHHHHHhhccCCceEccCCceeccccccccceeccChhHHHHHhhCCceEEEEEeCCCcEEEEccccc Confidence 8899999999999999974 7999999986 55778899999999999999999999999987 79999999999 Q ss_pred CCCCccceeeehhhhHHHHHHHHHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHhCCceecceeee---ecChhhhhCC Q lcl|Aclame:pro 616 AHAGSDYTRLSTARIVKEAVNAVREVADPFIGEPNDTGNRNALTAAVDKRLSKMIENKALLGFDFRL---VVTPQQELLG 692 (717) Q Consensus 616 ~s~ds~~~~I~vrR~~d~I~~~I~~~~~~~IgepN~~~~~~~i~~~I~~fL~~L~~~GaI~G~~~~~---~~t~~~i~~G 692 (717) ++++++|+||++||++++|+++|++.++|++||||++.+|.+|++.|+.||++||++|+|.||+++. +|+++++++| T Consensus 544 s~~~s~~~~i~vrR~~~~i~~si~~~~~~~v~e~n~~~l~~~i~~~i~~~L~~l~~~gal~g~~v~~d~~~nt~~~i~~G 623 (663) T protein:vir:10 544 TQVPSPFDRINVRRLFNMLKKNIGDTSKYELFENNDAFTRQSFRMETSQYLDGIRSLGGCYDFRVVCDTTNNTPNVIDRN 623 (663) T ss_pred CCCCcccceEehhhHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhcCceeeeEEEEcCCCCCHHHhhCC Confidence 7777899999999999999999999999999999999999999999999999999999999998753 6788999999 Q ss_pred EEEEEEEEEccccccEEEEEEEEeC Q lcl|Aclame:pro 693 EGSIELSLEAPNELRRLTTIVSLSA 717 (717) Q Consensus 693 ~l~v~i~v~P~~p~e~I~v~i~~ta 717 (717) +++++|+++|++|+|||+|||...+ T Consensus 624 ~~~~~i~~~p~~pae~i~~~~~~~~ 648 (663) T protein:vir:10 624 EFVGTIYVKPPRSINYITLNMVATS 648 (663) T ss_pred eEEEEEEEEecCCcceEEEEEEEee Confidence 9999999999999999999999988 No 8 >protein:vir:6894 Length: 660 # NCBI annotation: gp18 tail sheath protein # Family: family:all:661 # MgeID: mge:140 # MgeName: RB69 # Cross-refs: genbank:acc:NP_861870;genbank:gi:32453661;genbank:GeneID:1494296 Probab=100.00 E-value=1.3e-78 Score=447.60 Aligned_cols=606 Identities=14% Similarity=0.107 Sum_probs=316.5 Q ss_pred CCcchhcccCCceeEEEecCccccCcCCCCCcceeEEEEEeeccCCcccceecC-HHHHHHhhCCcccccCCcchHHHHH Q lcl|Aclame:pro 1 MAGFDQYQAIPGHNARFKDGNLNLKSDPNPRETESVVLLGTATDGPVMQPVRVT-PETAYNIFGKVAHENGVYNGATLLP 79 (717) Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~gp~~~~~~~~-~~~~~~~fg~~~~~~~~~~~~~~~~ 79 (717) |. | --||||||+.| +. .++++++|++.++||.++|||+++|++|| ..+++++||++.+.+-. ..++. T Consensus 1 ~~----~-~~PgVyv~e~~-~~---~~i~~v~ts~~~fvG~~~~Gp~~~p~~i~s~~~~~~~fG~~~~~~~~---~~~~~ 68 (660) T protein:vir:68 1 MA----L-LSPGVELKETT-VQ---STVVNNSTGTAALAGKFQWGPAFQIKQITDEVALVDMFGTPNTDTAD---YFMSA 68 (660) T ss_pred Cc----c-ccCceEEEEec-CC---cccccCCCcceeEEecccCCCCccCEEecCHHHHHHhcCCccCccch---hHHHH Confidence 32 2 34999999996 44 67999999999999999999999999996 56668999998666533 33455 Q ss_pred HHHHHHHccCCcEEEEEEecCcceeeeeecccccccccccCCcccceeecCc---ccceeeccCCcceeeeEEEeeccee Q lcl|Aclame:pro 80 KFEELWAAGNRDIRLMRTTGVNAVSSLLGTSYSKNSKEVAEDKLGGAQARGN---VAATFTLPNGGIVEATFLLKARGVI 156 (717) Q Consensus 80 ~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (717) . +|.|||.+||++|+++....- +.+.........+..+|+ +..++++.-+ +.. T Consensus 69 ~---~f~~~g~~~~vvRv~~~~~~~---------~~~~~~~~~~~t~~~~g~~~~~g~~~~v~~~------------~~~ 124 (660) T protein:vir:68 69 M---NFLQYGNDLRVVRAVDRDTAK---------NSSPVAGNINFTISSAGTNYRVGDKVVVKYS------------TDI 124 (660) T ss_pred H---HHHhCCCeEEEEEeccccccc---------ccccccccceeeeeccCcceeeeeeeeeecc------------ccc Confidence 5 488999999999998643221 111000000111222222 1111111100 011 Q ss_pred ecCce--eEeccccceee--------ccccccc--hh------heeecCCcccccccceeehhhhhhhhheeeeeeeEee Q lcl|Aclame:pro 157 IPPNN--YTLDVGTEEDM--------KAGTQPT--FA------QVLLNENVADMESEITVSYEFTYKDAQGETKTSEVLD 218 (717) Q Consensus 157 ~~~~~--~~~~~~~~~~~--------~~~~~~~--~~------~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~gelld 218 (717) ..+.. ..++..+.... .++.... +. ...+.... .+....+.....+.+ .+..+. T Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~ta~~~~~a~~~~~~~~~~~~~~~~v~~~~--~~~~~~~~v~~~~~d------~~~~~~ 196 (660) T protein:vir:68 125 IEPDGEVTSVDSDGKILNIFIPSGKIIAKAKEIGEYPELGSNWTAEMSGSS--SGLSAVITIDSVVMD------SGILLT 196 (660) T ss_pred ccccccceeeeecCceeeeeeccccccccceeeccccccccceeEEeeccc--ccceeeeeecccccc------ccceee Confidence 11100 01111000000 0000000 00 00000000 000000000000000 000000 Q ss_pred cccccccccCcccCCceEEEEEeeccccceeeecCccccccchheeccceeEEEEecCccccceEEEEeecccccccccc Q lcl|Aclame:pro 219 NNTDKDGKPMIAKGADVTIKLEHVALAGLKLYADGIEVVDAKAFTVAGDQLTIHSNSKMKLGASLEAQYAYNLVEVIQPV 298 (717) Q Consensus 219 ~~ie~~~~p~~~~~ag~i~a~r~~~a~~a~~~~~g~~~~~s~~~g~~an~i~v~l~d~~~t~~~l~v~~a~~~~~~~~d~ 298 (717) + .. ..|... .+..+.. . ....+..-......|...|.+++.+.+............. ......... T Consensus 197 ~-~~--ta~~~~-~~~~~~~--~-------~~~~~~~~~~A~~~g~~G~~i~v~~~~~a~~~~~~~~~~~-~~~~~~~~~ 262 (660) T protein:vir:68 197 E-VE--TSEEAI-TSLTFQE--S-------IKKYGVPGVVALYPGELGDQLEIEIVSKADYDKGASAQLK-IYPDGGTRY 262 (660) T ss_pred e-ec--cccccc-cccceee--e-------ecccCccccccccccccccceEEEEeccccccccccccce-eeecccccc Confidence 0 00 000000 0000000 0 0001100001222345556666665333222111111000 000000000 Q ss_pred eEEEeec--cccccceEEEEEecCCce-EEEEEeeeccCccceeeeeeeeccccchhHHHHHHHhhcCccceeEEeeecc Q lcl|Aclame:pro 299 IELESIF--GGGVYNDIMRKVESKDGA-VTVTITKPESKRGMISEDPLVFKSGDYTNFKMLVDAINNHPFNNVVRARTKP 375 (717) Q Consensus 299 i~l~a~~--~G~~GN~i~I~v~~~~~~-~t~~lt~~~~~~~~~~~~~~~l~~g~~~~~~~lv~~IN~~~~~~~~~a~~~~ 375 (717) ......+ .....+.+.+.+...+.. .++.++.. .+... ..+....+..+ ..|. ....+.+.... T Consensus 263 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~---~~~~~------~~~~~~~~~~~--~~~~--~~~~v~~~~~~ 329 (660) T protein:vir:68 263 STAKAIFGYGPQTDDQYAIIVRRNDSVVQSVVLSTK---RGERD------IYGSNIFIDDF--FAKG--ASNYIFATAQG 329 (660) T ss_pred cceeeEeecccccccceeeeeecCCcceeeeeeecc---ccccc------ccccceeeehh--hccC--cccEEEEeecC Confidence 0000000 011111222222211111 11111110 00000 00000000000 0111 11111111110 Q ss_pred ccccccccccchhhhhhccCCccCcccchh-hhhhhcccccccccchhhhhhhhccccccceeEEeccccCCcccccccc Q lcl|Aclame:pro 376 EFEATFTSTLQAAADAKFSGGKDELSLDKE-EMYKRLGGEKNEEGFVTKQGAYQYLENYEVDYVIPLGVHADTKLIGKYD 454 (717) Q Consensus 376 ~~~~~l~s~~~~~~~~~ltgG~dG~~~~a~-e~~~al~~~~~~~~~v~~~~~~~~le~~~vd~vi~~~~~a~t~~~~~~~ 454 (717) .+........+.||.++...... ++. ....++..++.+.++++++.....+.. .... T Consensus 330 -------~~~~~~~~~~~~gg~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~l~~~~~~~~~~--~~~~ 387 (660) T protein:vir:68 330 -------WPKGFSGVIKLNGGLSSNETVEAGDLM-------------EAWDLFADRESVNAQLFIAGSCAGESL--EVAS 387 (660) T ss_pred -------CCccccceeeeccccccccccccchhh-------------hHHHHhhhhhccccceeeccccCCCch--HHHH Confidence 01111222345677665432211 111 111233445556666666544332211 1111 Q ss_pred hhHHHHHHHHHHHhhc----ccceeEEecCCCcchhhHHHHHHHHHHHHhhhhhhhhcccccccccchhhhhccccceeE Q lcl|Aclame:pro 455 DFAYQLALACAVMSHY----NSVTIGIIPTTTPSDISLAGVEEHVKKLENYANEFYMRDRFGNIIFDADRNKIDLGQFIE 530 (717) Q Consensus 455 ~~~~~~a~~~~~~s~~----~~~~i~ii~~~~~~~~~~a~v~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~ 530 (717) .+...+..||..+..+ .-.+..++.. +.......+.++...+... ........+.|+. T Consensus 388 ~v~~~l~~~~~~~~~~~~~~d~~~~~~~~~--~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~s~~~~ 449 (660) T protein:vir:68 388 TVQKHVVAIGDSRQDCLVLCSPPRAAVVGI--PVNRAVDNLVDWRTASGTY----------------TDNNFNISSTYAA 449 (660) T ss_pred HHHHHHHHHHHhhCCeEEEEcccceeEecC--CCCCCHHHHHHHHhhcccc----------------cccccccCcceEE Confidence 2445566677654211 0011122211 1112222333332211100 0011123367899 Q ss_pred EEeCcEEEEecccCcceeechhHHHHHHHhcC----CcccccCCceec---ccccccccCCHHHHHHHHhCCcEEEEEEc Q lcl|Aclame:pro 531 VVAGPDFIVRNTRLGQMASTPDASYIGMVSQL----KTQSAPTNKPLP---SVTALRYTYSANQLNRLTKARFATFKYKQ 603 (717) Q Consensus 531 v~~p~~~v~~~~~~~~~~~p~ag~vAGl~A~~----gv~~SpaNk~L~---gv~~l~~~lt~~e~d~L~~~GI~~ir~~~ 603 (717) +++||++++++..+..+++|||+++||++|++ |+|+||+|+++. |+.++...+++.|++.||++|||+|++++ T Consensus 450 ~~~p~~~~~d~~~~~~~~~p~sg~~AGl~Ar~d~~~g~~~span~~~~~i~g~~~~~~~~~~~~~~~Ln~~gIn~i~~~~ 529 (660) T protein:vir:68 450 IDGNYKYQYDKYNDVNRWVPLAADIAGLCARTDNISQPWMSPAGYNRGQILNVIKLAIETRQAQRDRLYQEAINPVTGTG 529 (660) T ss_pred EEcCceEEecccCCceEEechhHHHHHHHHHHhccCCcEEccCCeeeceeeccceeeecCChhHHHHHhhCCceEEEEec Confidence 99999999999999999999999999999974 799999999754 55677888999999999999999999999 Q ss_pred CceEEEEeceecCCCCccceeeehhhhHHHHHHHHHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHhCCceecceee-- Q lcl|Aclame:pro 604 DGSIGVVDAPTSAHAGSDYTRLSTARIVKEAVNAVREVADPFIGEPNDTGNRNALTAAVDKRLSKMIENKALLGFDFR-- 681 (717) Q Consensus 604 g~G~~v~g~rTt~s~ds~~~~I~vrR~~d~I~~~I~~~~~~~IgepN~~~~~~~i~~~I~~fL~~L~~~GaI~G~~~~-- 681 (717) ++|+++||+||+++++++|+||++||++++|+++|++.++|++||||++.+|.+|++.|+.||++||++|+|.||+++ T Consensus 530 ~~G~~~wG~rT~~~~~s~~~~i~vrR~~~~i~~si~~~~~~~v~epn~~~~~~~i~~~i~~~L~~l~~~gal~gf~V~~d 609 (660) T protein:vir:68 530 GDGYVLYGDKTATSVPSPFDRINVRRLFNMVKTNIGSASKYRLFELNNAFTRSSFRTETSQYLQGIKALGGVYNFKVVCD 609 (660) T ss_pred CCeEEEEcceecCCCCcccceEehhhHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhcCceeeeEEEEe Confidence 999999999999877789999999999999999999999999999999999999999999999999999999999863 Q ss_pred -eecChhhhhCCEEEEEEEEEccccccEEEEEEEEeC Q lcl|Aclame:pro 682 -LVVTPQQELLGEGSIELSLEAPNELRRLTTIVSLSA 717 (717) Q Consensus 682 -~~~t~~~i~~G~l~v~i~v~P~~p~e~I~v~i~~ta 717 (717) ++|+++++++|+|+++|+++|++|+|||+|+|.... T Consensus 610 ~~~nt~~~i~~G~~~~~i~~~p~~pae~i~l~~~~~~ 646 (660) T protein:vir:68 610 TTNNTPAVIDRNEFVATFYLQPARSINYITLNFVATA 646 (660) T ss_pred cCCCCHHHhhCCeEEEEEEEEecCCcceEEEEEEEee Confidence 468889999999999999999999999999999887 No 9 >protein:vir:103456 Length: 659 # NCBI annotation: tail sheath monomer # Family: family:all:661 # MgeID: mge:1542 # MgeName: RB32 # Cross-refs: genbank:acc:YP_803108;genbank:gi:116326388;genbank:GeneID:4405485 Probab=100.00 E-value=2e-78 Score=446.50 Aligned_cols=615 Identities=12% Similarity=0.066 Sum_probs=318.4 Q ss_pred hhcccCCceeEEEecCccccCcCCCCCcceeEEEEEeeccCCcccceecC-HHHHHHhhCCcccccCCcchHHHHHHHHH Q lcl|Aclame:pro 5 DQYQAIPGHNARFKDGNLNLKSDPNPRETESVVLLGTATDGPVMQPVRVT-PETAYNIFGKVAHENGVYNGATLLPKFEE 83 (717) Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~gp~~~~~~~~-~~~~~~~fg~~~~~~~~~~~~~~~~~~~~ 83 (717) -+| --||||||+.|.+. +.++. +|++.+++|.++|||+++|++|+ ..++++.||++.+.+ +++ ++..+ T Consensus 1 ~~~-~~PgVyv~e~~~~~---~~~~~-~ts~~~fvG~~~~Gp~~~p~~i~s~~d~~~~fG~~~~~~---~~~---~~v~~ 69 (659) T protein:vir:10 1 MTL-LSPGIELKETTVQS---TVVNN-STGTAALAGKFQWGPAFQIKQVTNEVDLVNTFGQPTAET---ADY---FMSAM 69 (659) T ss_pred Cce-ecCceEEEEecCCc---eeccc-CccceEEEecccCCCCCccEEecCHHHHHHHcCCcCCCc---chh---HHHHH Confidence 223 35999999999988 66665 79999999999999999999995 777799999985544 233 34445 Q ss_pred HHHccCCcEEEEEEecCcceeeeeecccccccccccCCcccceeecCcc-----cceeeccCCccee--eeEEEeeccee Q lcl|Aclame:pro 84 LWAAGNRDIRLMRTTGVNAVSSLLGTSYSKNSKEVAEDKLGGAQARGNV-----AATFTLPNGGIVE--ATFLLKARGVI 156 (717) Q Consensus 84 ~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~--~~~~~~~~~~~ 156 (717) ||.|||.+||++|++|.++........+..+.+ +..+|.. ..+.+.+.+.... ...++-..+. T Consensus 70 ~f~ngg~~~~vvRv~~~~~~~~a~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~g~~~~v~~vd~~~~- 139 (659) T protein:vir:10 70 NFLQYGNDLRVVRAVDRDTAKNSSPIAGNIEYT---------ISTPGSNYAVGDKITVKYVSDAIETEGKITEVDTDGK- 139 (659) T ss_pred HHhhCCCeEEEEEccCcccccccccccccceee---------EeecccccccccceeeeecCCCccccceeeEEecccc- Confidence 699999999999999876543222221111111 1111110 0111111111100 0000000000 Q ss_pred ecCceeEeccccceeeccccccchhheeecCCcccccccceeehhhhhhhhheeeeeeeEeeccccc--ccccCcccCCc Q lcl|Aclame:pro 157 IPPNNYTLDVGTEEDMKAGTQPTFAQVLLNENVADMESEITVSYEFTYKDAQGETKTSEVLDNNTDK--DGKPMIAKGAD 234 (717) Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~gelld~~ie~--~~~p~~~~~ag 234 (717) +...++.......... ........ ..+ ..+.+.-...... ..+.-+.+.+..... ++..... T Consensus 140 --~~~~~i~~~~~~~~~~-~~g~~~~~--~~~-----~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~v~~~~~---- 203 (659) T protein:vir:10 140 --IKKINIPTAKIIAKAK-EVGEYPTL--GSN-----WTAEISSSSSGLA--AVITLGKIITDSGILLAEIENAEA---- 203 (659) T ss_pred --cceeeecccccccccc-ccccccee--eee-----eeeeeeeeccccc--eeeEEeeeecCCceeEEeeccccc---- Confidence 0000000000000000 00000000 000 0000000000000 000000000000000 0000000 Q ss_pred eEEEEEeeccccceeeecCccccccchheeccceeEEEEecCccccceEEEEeecccccccccceEEEeec--cccccce Q lcl|Aclame:pro 235 VTIKLEHVALAGLKLYADGIEVVDAKAFTVAGDQLTIHSNSKMKLGASLEAQYAYNLVEVIQPVIELESIF--GGGVYND 312 (717) Q Consensus 235 ~i~a~r~~~a~~a~~~~~g~~~~~s~~~g~~an~i~v~l~d~~~t~~~l~v~~a~~~~~~~~d~i~l~a~~--~G~~GN~ 312 (717) ++.. ...+......+........-|...|.+++.............+.-........ -....++.. .+...+. T Consensus 204 ---a~t~-~~~~~~~~~~~~~~v~a~~~G~~g~~~tv~~~~~a~~~~~~~v~v~~~~~~~~-~a~~~t~~~~~~~~~~~~ 278 (659) T protein:vir:10 204 ---AMTA-VDFQANLKKYGIPGVVALYPGELGDKIEIEIVSKADYAKGASALLPIYPGGGT-RASTAKAVFGYGPQTDSQ 278 (659) T ss_pred ---cccc-cccccceeecccccccccccceecccceEEEechhhccccceeeeeeeeeccc-ccccceeeeeeccccccc Confidence 0000 00111111111111122233555566666654333322222221100000000 000000000 1111111 Q ss_pred EEEEEecCCc-eEEEEEeeeccCccceeeeeeeeccccchhHHHHHH-HhhcCccceeEEeeeccccccccccccchhhh Q lcl|Aclame:pro 313 IMRKVESKDG-AVTVTITKPESKRGMISEDPLVFKSGDYTNFKMLVD-AINNHPFNNVVRARTKPEFEATFTSTLQAAAD 390 (717) Q Consensus 313 i~I~v~~~~~-~~t~~lt~~~~~~~~~~~~~~~l~~g~~~~~~~lv~-~IN~~~~~~~~~a~~~~~~~~~l~s~~~~~~~ 390 (717) ..+.+..... ..++.+. ...+...+........ .+.+.... .+....... +...... T Consensus 279 ~~~~v~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~~~~~-------~~~~~~~ 337 (659) T protein:vir:10 279 YAIIVRRNDAIVQSVVLS-------------TKRGEKDIYDSNIYIDDFFAKGGSE-YIFATAQNW-------PEGFSGI 337 (659) T ss_pred hhhccccccceeeeeeee-------------ccccccccccchhhhhhhhccCccc-EEEEeeccc-------CCCccce Confidence 1111100000 0000000 0001111111111111 12111111 111111100 0111112 Q ss_pred hhccCCccCcc-cchhhhhhhcccccccccchhhhhhhhccccccceeEEeccccCCcccccccchhHHHHHHHHHHHhh Q lcl|Aclame:pro 391 AKFSGGKDELS-LDKEEMYKRLGGEKNEEGFVTKQGAYQYLENYEVDYVIPLGVHADTKLIGKYDDFAYQLALACAVMSH 469 (717) Q Consensus 391 ~~ltgG~dG~~-~~a~e~~~al~~~~~~~~~v~~~~~~~~le~~~vd~vi~~~~~a~t~~~~~~~~~~~~~a~~~~~~s~ 469 (717) ..+.+|.++.. ..+.++... ..++...+.+++++++..+...+.. .....+...+..||..+. T Consensus 338 ~~l~gg~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~il~~p~~~~~~~--~~~~~v~~al~~~~~~~~- 401 (659) T protein:vir:10 338 LTLSGGLSSNAEVTAGDLMEA-------------WDFFADRESVDVQLFIAGSCAGESL--ETASTVQKHVVSIGDARQ- 401 (659) T ss_pred eeecccccccccccchhHHHH-------------HHHhhhccccceeEEEecCCCCcch--hhhHHHHHHHHHHHHhhC- Confidence 34566665532 122122111 1122334455666665443322111 111234555666776542 Q ss_pred cccceeEEecCCC------cchhhHHHHHHHHHHHHhhhhhhhhcccccccccchhhhhccccceeEEEeCcEEEEeccc Q lcl|Aclame:pro 470 YNSVTIGIIPTTT------PSDISLAGVEEHVKKLENYANEFYMRDRFGNIIFDADRNKIDLGQFIEVVAGPDFIVRNTR 543 (717) Q Consensus 470 ~~~~~i~ii~~~~------~~~~~~a~v~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~v~~p~~~v~~~~~ 543 (717) .++.++.... +.......+..+.+..... ........+.|+.++|||++++++.. T Consensus 402 ---~~~~~~d~p~~~~~~~~~~~~~~~~~~~r~~~~~~----------------~~~~~~~~s~~~~l~~p~~~~~d~~~ 462 (659) T protein:vir:10 402 ---DCLVLCSPPRETVVGIPVTRAVDNLVNWRTAAGSY----------------TDNNFNISSTYAAIDGNYKYQYDKYN 462 (659) T ss_pred ---CeEEEEcCccccccCCCcccCHHHHHHHHHhcccc----------------cccccccCcceEEEEeCcEEEecccC Confidence 2333332211 1111122222222211000 00111123678999999999999999 Q ss_pred CcceeechhHHHHHHHhcC----CcccccCCcee---cccccccccCCHHHHHHHHhCCcEEEEEEcCceEEEEeceecC Q lcl|Aclame:pro 544 LGQMASTPDASYIGMVSQL----KTQSAPTNKPL---PSVTALRYTYSANQLNRLTKARFATFKYKQDGSIGVVDAPTSA 616 (717) Q Consensus 544 ~~~~~~p~ag~vAGl~A~~----gv~~SpaNk~L---~gv~~l~~~lt~~e~d~L~~~GI~~ir~~~g~G~~v~g~rTt~ 616 (717) +..+++|||+++||++|++ |+|+||+|+++ .|+.++...+++.|++.||++|||||++++++|+++||+||+. T Consensus 463 ~~~~~~p~sg~~AGl~Ar~D~~~g~~~span~~~~~i~g~~~~~~~~~~~~~~~Ln~~gIn~i~~~~~~G~~~wG~rT~~ 542 (659) T protein:vir:10 463 DVNRWVPLAADIAGLCARTDNVSQTWMSPAGYNRGQILNVIKLAIETRQAQRDRLYQEAINPVTGTGGDGYVLYGDKTAT 542 (659) T ss_pred CceEEechHHHHHHHHHHHhccCCceEccCCceeeeeeccccceecCCHhHHHHHhhCCeeEEEEeCCCeEEEEcccccC Confidence 9999999999999999975 89999999974 4666778889999999999999999999999999999999998 Q ss_pred CCCccceeeehhhhHHHHHHHHHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHhCCceecceeee---ecChhhhhCCE Q lcl|Aclame:pro 617 HAGSDYTRLSTARIVKEAVNAVREVADPFIGEPNDTGNRNALTAAVDKRLSKMIENKALLGFDFRL---VVTPQQELLGE 693 (717) Q Consensus 617 s~ds~~~~I~vrR~~d~I~~~I~~~~~~~IgepN~~~~~~~i~~~I~~fL~~L~~~GaI~G~~~~~---~~t~~~i~~G~ 693 (717) +++++|+||++||++++|+++|++.++|++||||++.+|.+|+..|+.||++||++|+|.+|+|+. +|+++++++|+ T Consensus 543 ~~~s~~~~i~vrR~~~~i~~si~~~~~~~v~e~n~~~l~~~i~~~i~~fL~~l~~~gal~~~~V~~d~~~nt~~~i~~G~ 622 (659) T protein:vir:10 543 SVPSPFDRINVRRLFNMLKTNIGRSSKYRLFELNNAFTRSSFRTETAQYLQGIKALGGIYEYRVVCDTTNNTPSVIDRNE 622 (659) T ss_pred CCCcccceEehhhHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhcCceeeEEEEEcCCCCCHHHhhCCe Confidence 777899999999999999999999999999999999999999999999999999999999998754 67888999999 Q ss_pred EEEEEEEEccccccEEEEEEEEeC Q lcl|Aclame:pro 694 GSIELSLEAPNELRRLTTIVSLSA 717 (717) Q Consensus 694 l~v~i~v~P~~p~e~I~v~i~~ta 717 (717) ++++|+++|++|+|||+|+|..++ T Consensus 623 ~~~~i~~~p~~pae~i~~~~~~~~ 646 (659) T protein:vir:10 623 FVATFYIQPARSINYITLNFVATA 646 (659) T ss_pred EEEEEEEEecCCcceEEEEEEEEe Confidence 999999999999999999999998 No 10 >protein:vir:98263 Length: 664 # NCBI annotation: gp18 tail sheath monomer # Family: family:all:661 # MgeID: mge:1667 # MgeName: RB43 # Cross-refs: genbank:acc:YP_239196;genbank:gi:66391671;genbank:GeneID:3416365 Probab=100.00 E-value=2.9e-79 Score=451.18 Aligned_cols=574 Identities=12% Similarity=0.071 Sum_probs=305.5 Q ss_pred CCcchhcccCCceeEEEecCccccCcCCCCCcceeEEEEEeeccCCcccceecC-HHHHHHhhCCcccccCCcchHHHHH Q lcl|Aclame:pro 1 MAGFDQYQAIPGHNARFKDGNLNLKSDPNPRETESVVLLGTATDGPVMQPVRVT-PETAYNIFGKVAHENGVYNGATLLP 79 (717) Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~gp~~~~~~~~-~~~~~~~fg~~~~~~~~~~~~~~~~ 79 (717) |+ |. -|||+||+.| +. +++++++|++.++||.++|||+++|++|+ ..++++.||++.+.+ +++.++. T Consensus 1 ma----~~-~PgVyv~E~~-~~---~~i~~~~ts~~~~vG~~~~Gp~~~p~~i~s~~d~~~~fG~~~~~~---~~~~~v~ 68 (664) T protein:vir:98 1 MA----LQ-SPGIETKETS-VQ---STVVRNSTGRAAIVGKFSWGPAYQIRQISNEVELVNYFGAPDNLT---ADYFMSA 68 (664) T ss_pred Cc----ee-cCceEEEecC-CC---cccccccccceEEEeeccCCCCCccEEecCHHHHHHhcCCccccc---hhHHHHH Confidence 88 33 6999999997 45 79999999999999999999999999995 667799999985544 3344455 Q ss_pred HHHHHHHccCCcEEEEEEecCcceeeeeecccccccccccCCcccceeecCcccceeeccCCcceeeeEEEeecceeecC Q lcl|Aclame:pro 80 KFEELWAAGNRDIRLMRTTGVNAVSSLLGTSYSKNSKEVAEDKLGGAQARGNVAATFTLPNGGIVEATFLLKARGVIIPP 159 (717) Q Consensus 80 ~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (717) + ||.|||.+||++|+++.++.. +.+.........+..+|.-. .......+.+..+..... T Consensus 69 ~---~f~ngg~~~~vvRv~~~~~~~---------~a~~~~~~~~~~~~~~~~~~--------~~g~~~~~~~~~~~~~~~ 128 (664) T protein:vir:98 69 V---NFLQYGNDLRLVRVVDKDAAK---------NASAIFNQIKTTIASQGSNY--------NVGDVIKVKYSNTVVEEN 128 (664) T ss_pred H---HHHhcCCeEEEEEecCccccc---------cccccccccceeeccCCccc--------ccccceeEeecCcccccc Confidence 4 599999999999999775432 11111111111112222100 001111111111100000 Q ss_pred ceeEeccccceeeccccccchhheeecCCcccccccceeehhhhh----hhhheeeeeeeEeecccccccccCcccCCce Q lcl|Aclame:pro 160 NNYTLDVGTEEDMKAGTQPTFAQVLLNENVADMESEITVSYEFTY----KDAQGETKTSEVLDNNTDKDGKPMIAKGADV 235 (717) Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~A~~~~~~gelld~~ie~~~~p~~~~~ag~ 235 (717) . ....+++. |..+.+...... .-+.........+.. .+ . T Consensus 129 ~----------------------~~~~~~~~--gn~~~v~i~~~~~~~~~~~~~~~~~~~~~~~----~~---------s 171 (664) T protein:vir:98 129 G----------------------KVTQVDSN--GKILAVTIPKRKKSLLVLNRSVLTQIFLLVG----TT---------E 171 (664) T ss_pred e----------------------eeccCCCC--CceeeEeeccCccceeecccccccccceecc----cc---------e Confidence 0 00001100 111111100000 000001000110000 00 0 Q ss_pred EEEEEeeccccceeeecCccccccchheeccceeEEEEecCc---cccceEEEEeecccccccccceEEEeeccccccce Q lcl|Aclame:pro 236 TIKLEHVALAGLKLYADGIEVVDAKAFTVAGDQLTIHSNSKM---KLGASLEAQYAYNLVEVIQPVIELESIFGGGVYND 312 (717) Q Consensus 236 i~a~r~~~a~~a~~~~~g~~~~~s~~~g~~an~i~v~l~d~~---~t~~~l~v~~a~~~~~~~~d~i~l~a~~~G~~GN~ 312 (717) + ...... ...+....+. .....+++...+.. ....... ..........+.+.++|.|||. T Consensus 172 ~-~~~s~g-~a~a~~v~~v---------~~d~~~~~~~~~~a~~~i~~~~~~------~~~~~~~~~~~~a~~~G~~Gn~ 234 (664) T protein:vir:98 172 I-VSQSSG-VSASITIDGI---------ESDSGITLLNLDIAKETIQGTSFQ------TLTQKYQIPSVVALYPGELGST 234 (664) T ss_pred e-eeeecc-cceeeecccc---------cccceeeccccceeeeccccccce------eeeeccccceeeeeecccccce Confidence 0 000000 0000111110 00000011100000 0011100 1112234557888999999999 Q ss_pred EEEEEecCCceE-EEEEeeeccCccceeeeeeeeccccc-hhHHHHHHHhhcCccceeEEee---eccc-cccccc---- Q lcl|Aclame:pro 313 IMRKVESKDGAV-TVTITKPESKRGMISEDPLVFKSGDY-TNFKMLVDAINNHPFNNVVRAR---TKPE-FEATFT---- 382 (717) Q Consensus 313 i~I~v~~~~~~~-t~~lt~~~~~~~~~~~~~~~l~~g~~-~~~~~lv~~IN~~~~~~~~~a~---~~~~-~~~~l~---- 382 (717) +.+.+....... ...++..................+.. .....++ +... ....+.. ..+. .+.... T Consensus 235 isv~i~s~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~--~~~~e~~~~~~~~~~~~~~~~~~~~ 310 (664) T protein:vir:98 235 VQVEIISKAAYDTGAMISGYPSGISVKNSGRSVMTYGPQTDNQYAFV--VRRG--GIVQESFIVSTDKTDKDIYGVNIYM 310 (664) T ss_pred eeeeecccccccCcceEeeccCceecccceeeeeeccccCccceeEE--EecC--CceeeeEEeecccCcccceeeeeec Confidence 998874322111 11111100000000000000000000 0000000 0000 0000000 0000 000000 Q ss_pred ------------------cccchhhhhhccCCccCcccch-hhhhhhcccccccccchhhhhh--hhccccccceeEEec Q lcl|Aclame:pro 383 ------------------STLQAAADAKFSGGKDELSLDK-EEMYKRLGGEKNEEGFVTKQGA--YQYLENYEVDYVIPL 441 (717) Q Consensus 383 ------------------s~~~~~~~~~ltgG~dG~~~~a-~e~~~al~~~~~~~~~v~~~~~--~~~le~~~vd~vi~~ 441 (717) .+........+.+|.+..+... .+. ..++ +...+.+.++++ T Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gg~~~~~~~g~~~~---------------~tgl~~l~~~~~~~~~ll--- 372 (664) T protein:vir:98 311 DDFFANGGSQYVFGTSMNWPKGFSGILEFGGGLSSNDTVGADEL---------------MTGWDMFADREALHVPLL--- 372 (664) T ss_pred hhheecccceeeeeecccCCcccceeEeccCccccccccCchhH---------------HHHHHhhhcccccccceE--- Confidence 0000000011122221110000 000 0000 000111222322 Q ss_pred cccCCcccccccchhHHHHHHHHHHHhhcccceeEEecCCCcch--hhHHHHHHHHHHHHhhhhhhhhcccccccccc-- Q lcl|Aclame:pro 442 GVHADTKLIGKYDDFAYQLALACAVMSHYNSVTIGIIPTTTPSD--ISLAGVEEHVKKLENYANEFYMRDRFGNIIFD-- 517 (717) Q Consensus 442 ~~~a~t~~~~~~~~~~~~~a~~~~~~s~~~~~~i~ii~~~~~~~--~~~a~v~~~~~~~~~~~~~~~~~d~~~~~~~~-- 517 (717) +.|.....+ ...+.....+..|+++.+.+++++.+.....+ T Consensus 373 -----------------------------------~~p~~~~~~~~~~~~v~~al~~~a~~~~~~~a~~d~~~~~~~~~~ 417 (664) T protein:vir:98 373 -----------------------------------IAGGCAGESVEIASTVQKHVISIGDERQDCTVFVSPPRSLLVNIP 417 (664) T ss_pred -----------------------------------EecCCCCCcHHHHHHHHHHHHHHHHhcCCeEEEEccccceeccCC Confidence 233222111 11111222223333333333333322110000 Q ss_pred ----------------------hhhhhccccceeEEEeCcEEEEecccCcceeechhHHHHHHHhcC----CcccccCCc Q lcl|Aclame:pro 518 ----------------------ADRNKIDLGQFIEVVAGPDFIVRNTRLGQMASTPDASYIGMVSQL----KTQSAPTNK 571 (717) Q Consensus 518 ----------------------~~~~~~~~~~~~~v~~p~~~v~~~~~~~~~~~p~ag~vAGl~A~~----gv~~SpaNk 571 (717) ........+.|+.++|||++++++..+..+++|||+++||++|++ |+|+||+|+ T Consensus 418 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~p~~~~~d~~~~~~~~~p~sg~~AGl~A~~D~~~g~~~span~ 497 (664) T protein:vir:98 418 LATAVDNIVEWRTGYKISGGTPVDNNLNVSSSYGFLDGNYKYQYDKYNDVNRWVPLAGDIAGLCVYTDSVANPWMSPAGY 497 (664) T ss_pred ccccHHHHHHHhhhccccccchhhhhcCCccceEEEEcCeEEEecccCCceEEechHHHHHHHHHHhhhcCCcEECcCCc Confidence 000111236789999999999999999999999999999999975 799999999 Q ss_pred ee---cccccccccCCHHHHHHHHhCCcEEEEEEcC-ceEEEEeceecCCCCccceeeehhhhHHHHHHHHHHHHHHhcc Q lcl|Aclame:pro 572 PL---PSVTALRYTYSANQLNRLTKARFATFKYKQD-GSIGVVDAPTSAHAGSDYTRLSTARIVKEAVNAVREVADPFIG 647 (717) Q Consensus 572 ~L---~gv~~l~~~lt~~e~d~L~~~GI~~ir~~~g-~G~~v~g~rTt~s~ds~~~~I~vrR~~d~I~~~I~~~~~~~Ig 647 (717) ++ .|+.++...+++.|++.||++|||+|+.+++ +|+++||+||+++++++|+||++||++++|+++|++.++|++| T Consensus 498 ~~~~i~g~~~~~~~~~~~~~~~Ln~~gIn~i~~~~~~~G~~~wG~rT~~~~~s~~~~i~vrR~~~~i~~si~~~~~~~v~ 577 (664) T protein:vir:98 498 NRGQIRNCIKLAIEPRTAHRDAMYQVQINPVTGFAGGSGFVLYGDKTLTSVPSPFDRINVRRLFNMIKKDIGDNAKYKLF 577 (664) T ss_pred eeeeeeccccceeecChhhHHHHHhCCCeEEEEeeCCCcEEEEcccccCCCCcccceEeehhHHHHHHHHHHHHHHHhhc Confidence 64 4667788889999999999999999999987 6999999999987778999999999999999999999999999 Q ss_pred ccCCHHHHHHHHHHHHHHHHHHHhCCceecceeee---ecChhhhhCCEEEEEEEEEccccccEEEEEEEEeC Q lcl|Aclame:pro 648 EPNDTGNRNALTAAVDKRLSKMIENKALLGFDFRL---VVTPQQELLGEGSIELSLEAPNELRRLTTIVSLSA 717 (717) Q Consensus 648 epN~~~~~~~i~~~I~~fL~~L~~~GaI~G~~~~~---~~t~~~i~~G~l~v~i~v~P~~p~e~I~v~i~~ta 717 (717) |||++.+|.+|++.|+.||++||++|+|.||.++. +|+++++++|+++++|+++|++|+|||+|+|..+. T Consensus 578 epn~~~l~~~i~~~i~~~L~~l~~~gal~g~~V~~d~~~nt~~~i~~G~~~~~i~~~p~~pae~I~~~~~q~~ 650 (664) T protein:vir:98 578 ENNDDFTRASFRMDTGQYMTNIRALGGCYDYRVICDTTNNTPDVIDRNEFVATVYVKPPRSINYITLNFVATS 650 (664) T ss_pred CCCCHHHHHHHHHHHHHHHHHHHhcCceeeeEEEEcCCCCCHHHhhCCeEEEEEEEEecCCcceEEEEEEEee Confidence 99999999999999999999999999999998643 67888999999999999999999999999999997 No 11 >protein:vir:80984 Length: 666 # NCBI annotation: gp18 tail sheath protein # Family: family:all:661 # MgeID: mge:1888 # MgeName: Phi1 # Cross-refs: genbank:acc:YP_001469499;genbank:gi:157311456;genbank:GeneID:5602117 Probab=100.00 E-value=3.1e-78 Score=445.52 Aligned_cols=595 Identities=13% Similarity=0.120 Sum_probs=309.5 Q ss_pred CCcchhcccCCceeEEEecCccccCcCCCCCcceeEEEEEeeccCCcccceecC-HHHHHHhhCCcccccCCcchHHHHH Q lcl|Aclame:pro 1 MAGFDQYQAIPGHNARFKDGNLNLKSDPNPRETESVVLLGTATDGPVMQPVRVT-PETAYNIFGKVAHENGVYNGATLLP 79 (717) Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~gp~~~~~~~~-~~~~~~~fg~~~~~~~~~~~~~~~~ 79 (717) |. .--||||||+.|+ . ..+++++|++.++||.++|||+++|++|| ..++++.||++.+.+ +...++. T Consensus 1 ~~-----~~~Pgvyv~e~~~-~---~~~~~~~t~~~~~vg~~~~gp~~~p~~i~~~~~~~~~fg~~~~~~---~~~~~~~ 68 (666) T protein:vir:80 1 MT-----LLSPGFETKETTL-S---TTIVQSATGRAALVGKFQWGPAFQIIQVTNEVELVNKFGQPDNNT---ADYFMSG 68 (666) T ss_pred Cc-----eecCceEEEEecC-C---ccccccCcccceEEeccccCCCccceEecCHHHHHHhcCCccCcc---chHHHHH Confidence 32 2349999999974 3 46889999999999999999999999996 666689999986554 2334455 Q ss_pred HHHHHHHccCCcEEEEEEecCcceeeeeecccccccccccCCcccceeecCc---ccceeeccCCcceeeeEEEeeccee Q lcl|Aclame:pro 80 KFEELWAAGNRDIRLMRTTGVNAVSSLLGTSYSKNSKEVAEDKLGGAQARGN---VAATFTLPNGGIVEATFLLKARGVI 156 (717) Q Consensus 80 ~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (717) + +|.|||.+||++|+++.++.....+..++ ....+..+|. +...++. .+.+.-. T Consensus 69 ~---~f~~~g~~~~v~R~~~~~~~~~a~~~~~~---------~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~ 125 (666) T protein:vir:80 69 A---NFLQYGNDLRVVRVLNKEKAKNATALAGN---------IEFEITNEGSNYEVGDTIKI-----------KHNRQDI 125 (666) T ss_pred H---HHhcCCCeEEEEEecCccccccccccccc---------eeEEEeeccccccccccccc-----------cccCccc Confidence 5 48899999999999976544322111111 1111222221 1111111 0000000 Q ss_pred ecC-ceeEeccccceeeccccccchhheeecCCcccccccceeehhhhhhhhheeeeeeeEeecccccccccCcccCCce Q lcl|Aclame:pro 157 IPP-NNYTLDVGTEEDMKAGTQPTFAQVLLNENVADMESEITVSYEFTYKDAQGETKTSEVLDNNTDKDGKPMIAKGADV 235 (717) Q Consensus 157 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~gelld~~ie~~~~p~~~~~ag~ 235 (717) ..+ ....+.........+ .++ .++. ......+.. ..+..+ ..+++... ..+. T Consensus 126 ~~~g~~~~i~~~~~~~~~~--~~t-a~~~--~~a~~~~~~------~~v~~~----~~~~~~~~------------~~~~ 178 (666) T protein:vir:80 126 ETAGKVTKVDGDGKVKGVF--IPT-GKII--AHAKAIGVY------PELDGD----WTAEFTSS------------SGNG 178 (666) T ss_pred ccCcceEEEeecceeeeee--cch-hhhc--ccccccccc------ceeecc----ceeeeccc------------cccc Confidence 001 000111111000000 000 0000 000000000 000000 00000000 0000 Q ss_pred EEEEEeeccccceeeecCccccccchheeccceeEEEEecCccccceEEEEeecccccccccceEEEeeccccccceEEE Q lcl|Aclame:pro 236 TIKLEHVALAGLKLYADGIEVVDAKAFTVAGDQLTIHSNSKMKLGASLEAQYAYNLVEVIQPVIELESIFGGGVYNDIMR 315 (717) Q Consensus 236 i~a~r~~~a~~a~~~~~g~~~~~s~~~g~~an~i~v~l~d~~~t~~~l~v~~a~~~~~~~~d~i~l~a~~~G~~GN~i~I 315 (717) ..++.+... . .++-.+...... ..+.+ +...+.... ...+...+.+.++|.|||.+.+ T Consensus 179 ~~a~~V~~~----~-~~~~~~~~~~~~--a~~~~---------t~~~~~~~~------~~~~~~a~~a~~~g~~g~~l~v 236 (666) T protein:vir:80 179 SAALSVTKI----V-TDSGLLLTDLET--SRANI---------TNQTFLTKL------QKYDMPAVSAIYAGEIGNSLEV 236 (666) T ss_pred eeeeeeeee----e-cCCccceeeecc--ccccc---------ccccccccc------ccccchhhhhhcccccccceee Confidence 001101000 0 000000000000 00000 000000000 0000011122223333333332 Q ss_pred EEecCC--------------------------------ceEEEEEeeeccCccceeeeeeeecc--cc---chhHHHHHH Q lcl|Aclame:pro 316 KVESKD--------------------------------GAVTVTITKPESKRGMISEDPLVFKS--GD---YTNFKMLVD 358 (717) Q Consensus 316 ~v~~~~--------------------------------~~~t~~lt~~~~~~~~~~~~~~~l~~--g~---~~~~~~lv~ 358 (717) .+.... ...+..+... +...+. +.+.. ++ ......+-. T Consensus 237 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~----g~~~e~-~~~~~~~~~~~~~~~~~~~~~ 311 (666) T protein:vir:80 237 EILARSAFKNTAPDLTMYPYGGERTAARNLIPYAPQNDNQYAFIVRRD----GVVVES-YVLSTLKGDKDVYGNSIYMDD 311 (666) T ss_pred eeccccccccccccceeeeccccccccceeeeeccccccceeeEeccC----Ccccee-eecccccccccccchhhhhhh Confidence 221100 0000000000 000000 00000 00 000000111 Q ss_pred HhhcCccceeEEeeeccccccccccccchhhhhhccCCccCcccchhhhhhhcccccccccchhhhhhhhccccccceeE Q lcl|Aclame:pro 359 AINNHPFNNVVRARTKPEFEATFTSTLQAAADAKFSGGKDELSLDKEEMYKRLGGEKNEEGFVTKQGAYQYLENYEVDYV 438 (717) Q Consensus 359 ~IN~~~~~~~~~a~~~~~~~~~l~s~~~~~~~~~ltgG~dG~~~~a~e~~~al~~~~~~~~~v~~~~~~~~le~~~vd~v 438 (717) .+++.....+. .... .. .........+.+|.++.....+.. +............+++...+.++++++ T Consensus 312 ~~~~~~~~~~~-~~~~--~~-----~~~~~~~~~~~~g~~~~~~~~~~~----~~~~~~g~~~~~~~~~~~~~~~~~~~l 379 (666) T protein:vir:80 312 FFGRGSSQYIY-ATAQ--GW-----VDGFSGIISLAGGVSANEATTGGV----GADPFIGAMMQGWGLFAERESIHVNLL 379 (666) T ss_pred hhccccceeee-eccc--cc-----ccccceEEEecCCCCccccccccc----ccccccccchhhhhhhhhhcccccceE Confidence 11111111010 0000 00 000111123455554432211111 000000000112344555566667776 Q ss_pred EeccccCCcccccccchhHHHHHHHHHHHhhc----ccceeEEecCCCcchhhHHHHHHHHHHHHhhhhhhhhccccccc Q lcl|Aclame:pro 439 IPLGVHADTKLIGKYDDFAYQLALACAVMSHY----NSVTIGIIPTTTPSDISLAGVEEHVKKLENYANEFYMRDRFGNI 514 (717) Q Consensus 439 i~~~~~a~t~~~~~~~~~~~~~a~~~~~~s~~----~~~~i~ii~~~~~~~~~~a~v~~~~~~~~~~~~~~~~~d~~~~~ 514 (717) +..+...+.. ....+...+..+|..+..+ .-.+..++... .....+.+.++.+.+.... T Consensus 380 ~~p~~~~~~~---~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~vd~~--~~~~~~~~~~~~~~~~~~~------------ 442 (666) T protein:vir:80 380 IAGACAGEGD---AFSTVQKHAVSIGDERQDCLVMVSPPRSTVVNIP--VTTAIDNLIAWREGSGNYN------------ 442 (666) T ss_pred eecCcCCccc---chHHHHHHHHHHHHhhcceEEEeecceeEEeecC--CCCCHHHHHHHHHhcccch------------ Confidence 6543332211 1123445566677654321 11123333221 1222333433333221110 Q ss_pred ccchhhhhccccceeEEEeCcEEEEecccCcceeechhHHHHHHHhc----CCcccccCCce---ecccccccccCCHHH Q lcl|Aclame:pro 515 IFDADRNKIDLGQFIEVVAGPDFIVRNTRLGQMASTPDASYIGMVSQ----LKTQSAPTNKP---LPSVTALRYTYSANQ 587 (717) Q Consensus 515 ~~~~~~~~~~~~~~~~v~~p~~~v~~~~~~~~~~~p~ag~vAGl~A~----~gv~~SpaNk~---L~gv~~l~~~lt~~e 587 (717) .......+.|+.++|||++++++.....+++|||+++||++|+ +|+|+||+|++ +.|+.++...+++.| T Consensus 443 ----~~~~~~~s~~~~l~~p~~~~~d~~~~~~~~~p~sg~~AGl~Ar~D~~~g~~~sPan~~~~~i~g~~~~~~~~~~~~ 518 (666) T protein:vir:80 443 ----ENNMNINTTYAVIDGNYKYQYDKYNDVNRWVPLAADIAGLCARTDAVSQPWMSPAGYNRGQIMNVVKLAIEPRKAH 518 (666) T ss_pred ----hhhcccCcceEEEEcCceEEecccCCceeEechHHHHHHHHHHHhhcCCceEccCCeecceeeccccceeecChhH Confidence 0111223678999999999999998889999999999999997 48999999996 456678888999999 Q ss_pred HHHHHhCCcEEEEEEcCceEEEEeceecCCCCccceeeehhhhHHHHHHHHHHHHHHhccccCCHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 588 LNRLTKARFATFKYKQDGSIGVVDAPTSAHAGSDYTRLSTARIVKEAVNAVREVADPFIGEPNDTGNRNALTAAVDKRLS 667 (717) Q Consensus 588 ~d~L~~~GI~~ir~~~g~G~~v~g~rTt~s~ds~~~~I~vrR~~d~I~~~I~~~~~~~IgepN~~~~~~~i~~~I~~fL~ 667 (717) ++.||++|||||++++++|+++||+||+.+++++|+||++||++++|+++|++.++|+||||||+.+|.+|++.|+.||+ T Consensus 519 ~~~Ln~~gIn~i~~~~g~G~~~wG~rT~~~~~s~~~~i~vRRl~~~i~~si~~~~~~~v~epn~~~l~~~i~~~i~~~L~ 598 (666) T protein:vir:80 519 RDRLYQAAINPVIGAGGEGFILMGDKTATTVPSPFDRINVRRLFNMLKKNIGDSSKYKLFENNDNFTRASFRMEVSQYLS 598 (666) T ss_pred HHhhhhCCeeEEEEeCCCeEEEEccccCCCCCcccceeehhhHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHH Confidence 99999999999999999999999999998777899999999999999999999999999999999999999999999999 Q ss_pred HHHhCCceecceee---eecChhhhhCCEEEEEEEEEccccccEEEEEEEEeC Q lcl|Aclame:pro 668 KMIENKALLGFDFR---LVVTPQQELLGEGSIELSLEAPNELRRLTTIVSLSA 717 (717) Q Consensus 668 ~L~~~GaI~G~~~~---~~~t~~~i~~G~l~v~i~v~P~~p~e~I~v~i~~ta 717 (717) +||++|+|.||+++ .+|+++++++|+++++|+++|++|+|||+|+|...+ T Consensus 599 ~l~~~gal~g~~V~~d~~~nt~~di~~G~~~~~i~~~P~~Pae~I~~~~~~~~ 651 (666) T protein:vir:80 599 TIRSLGGIYDFRVQCDTTNNTPDVIDRNEFVASMFIKPAKSINYIMLNFTAVA 651 (666) T ss_pred HHHhcCceeeeEEEEcCCCCCHHHhhCCeEEEEEEEEecCCcceEEEEEEEee Confidence 99999999999864 367888999999999999999999999999999887 No 12 >protein:vir:108052 Length: 660 # NCBI annotation: gp18 tail sheath protein # Family: family:all:661 # MgeID: mge:2002 # MgeName: JS98 # Cross-refs: genbank:acc:YP_001595294;genbank:gi:161622600;genbank:GeneID:5783771 Probab=100.00 E-value=1.1e-77 Score=442.56 Aligned_cols=593 Identities=11% Similarity=0.055 Sum_probs=313.6 Q ss_pred hhcccCCceeEEEecCccccCcCCCCCcceeEEEEEeeccCCcccceecC-HHHHHHhhCCcccccCCcchHHHHHHHHH Q lcl|Aclame:pro 5 DQYQAIPGHNARFKDGNLNLKSDPNPRETESVVLLGTATDGPVMQPVRVT-PETAYNIFGKVAHENGVYNGATLLPKFEE 83 (717) Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~gp~~~~~~~~-~~~~~~~fg~~~~~~~~~~~~~~~~~~~~ 83 (717) =.| --||||||+.| +. +++++++|++.+++|.++|||+++|++|+ ..++++.||++.+.+- +..++++ T Consensus 1 ~~~-~~Pgvyv~e~~-~~---~~i~~~~t~~~~~vg~~~~gp~~~p~~v~s~~~~~~~fg~~~~~~~---~~~~~~~--- 69 (660) T protein:vir:10 1 MAL-LSPGIELKETS-VQ---STVVRNATGRAALVGKFQWGPAFQVTQITNEVELVDLFGGPNNEVA---DYFMSGM--- 69 (660) T ss_pred Cce-ecCceEEEeec-CC---ccccCCCcccceEEeecCCCCCccCeEcCCHHHHHHHcCCcCCCch---hHHHHHH--- Confidence 122 34999999997 45 68999999999999999999999999995 6666999999866652 3344555 Q ss_pred HHHccCCcEEEEEEecCcceeeeeecccccccccccCCcccceeecCc---ccceeeccCCcceeeeEEEeecceeecCc Q lcl|Aclame:pro 84 LWAAGNRDIRLMRTTGVNAVSSLLGTSYSKNSKEVAEDKLGGAQARGN---VAATFTLPNGGIVEATFLLKARGVIIPPN 160 (717) Q Consensus 84 ~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (717) +|.|||.+||++|+++.+... ..++ ........+..+|. |..+++. .+.+.-..+.. T Consensus 70 ~f~~~g~~~~vvrv~~~~~~~--------~~~~-~~~~~~~~~~~~~~~~~~g~~~~v-----------~~~~~~~~~~~ 129 (660) T protein:vir:10 70 NFLQYGNDLRTVRVVSREFAK--------NASP-IAGNIETTITTAGSNYAVGDKINI-----------KYNQTVVESEG 129 (660) T ss_pred HHHhCCceEEEEEeccccccc--------cccc-ccccceeEEeeccccccccceeeE-----------eeccccccccc Confidence 589999999999998653111 1111 11111112233332 2211111 11100000000 Q ss_pred ee-EeccccceeeccccccchhheeecCCcccccccceeehhhhhhhhheeeeeeeEeecccccccccCcccC-CceEEE Q lcl|Aclame:pro 161 NY-TLDVGTEEDMKAGTQPTFAQVLLNENVADMESEITVSYEFTYKDAQGETKTSEVLDNNTDKDGKPMIAKG-ADVTIK 238 (717) Q Consensus 161 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~gelld~~ie~~~~p~~~~~-ag~i~a 238 (717) .. ..+... ..+.... .+ ......++..+ . +.. ....|....... .+...+ T Consensus 130 ~v~~~~a~g-------~~~~~~~-----~t-----------a~~~~~a~~v~---~-~~~-~~~~~~~~~~~~~~~~~~a 181 (660) T protein:vir:10 130 RVTSVDTDG-------KILSVFI-----PS-----------AKIIAYARSLN---Q-YPT-LGPAWTAEVTSASSGVSGT 181 (660) T ss_pred cceeecccc-------ceeeecc-----cc-----------ccccccccccc---c-ccc-cccceeEEEecccCccccc Confidence 00 000000 0000000 00 00000011000 0 000 001111100000 000000 Q ss_pred EEeeccccceeeecCccccccchheeccceeEEEEecCccc--cceEEEEeecccccccccceEEEeeccccccceEEEE Q lcl|Aclame:pro 239 LEHVALAGLKLYADGIEVVDAKAFTVAGDQLTIHSNSKMKL--GASLEAQYAYNLVEVIQPVIELESIFGGGVYNDIMRK 316 (717) Q Consensus 239 ~r~~~a~~a~~~~~g~~~~~s~~~g~~an~i~v~l~d~~~t--~~~l~v~~a~~~~~~~~d~i~l~a~~~G~~GN~i~I~ 316 (717) + ...+. +.-. .+.+...+.... ..+... ..........+.+.++|.|||.+.+. T Consensus 182 ~----------sv~~~-------v~~~--~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~a~~~g~~G~~i~v~ 237 (660) T protein:vir:10 182 I----------TVGKI-------VTDS--GILLTEAENSEEAITSLEFQ-----AALKKFAMPGVVALYPGEIGSTLEVE 237 (660) T ss_pred e----------eeeee-------eccC--cceEEeeeccccccccccce-----eeccccccceeeeecccccCcceeEE Confidence 0 00000 0000 000111010000 000000 11112234567788889999988777 Q ss_pred EecC-C--ceEEEEEeeeccCccceeeeeeeeccccch-hHHHHHHHhhcCccc-----------------eeEEe-eec Q lcl|Aclame:pro 317 VESK-D--GAVTVTITKPESKRGMISEDPLVFKSGDYT-NFKMLVDAINNHPFN-----------------NVVRA-RTK 374 (717) Q Consensus 317 v~~~-~--~~~t~~lt~~~~~~~~~~~~~~~l~~g~~~-~~~~lv~~IN~~~~~-----------------~~~~a-~~~ 374 (717) +... + ......+...................+... ....++ ++.+... ..... ... T Consensus 238 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--v~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (660) T protein:vir:10 238 IVSKAAYEAGSSKMLDVYPGGGTRASIAKAVFNYGPQTDDQYAII--VRRDGAIVESVVLSTKEGEKDVYGNNIYLDDYF 315 (660) T ss_pred EeeccccCCcceeEEeeeeccceeeEEeeeecccccccccccccc--cccCCcccceeeeeccccccccccceeeeehhh Confidence 6321 1 111111111100000000000000000000 000000 0000000 00000 000 Q ss_pred cccccc------cccccchhhhhhccCCccCcccchh-hhhhhcccccccccchhhhhhhhccccccceeEEeccccCCc Q lcl|Aclame:pro 375 PEFEAT------FTSTLQAAADAKFSGGKDELSLDKE-EMYKRLGGEKNEEGFVTKQGAYQYLENYEVDYVIPLGVHADT 447 (717) Q Consensus 375 ~~~~~~------l~s~~~~~~~~~ltgG~dG~~~~a~-e~~~al~~~~~~~~~v~~~~~~~~le~~~vd~vi~~~~~a~t 447 (717) ..+... ...+........+.+|.++...... ++... ..++...+...+++++..+..... T Consensus 316 ~~~~~~~v~~~~~~~~~~~~~~~~l~gg~~~~~~~t~~~~~~~-------------~~~~~~~~~~~~~~l~~p~~~~~~ 382 (660) T protein:vir:10 316 AKGTSNYIYATSLNWPKGFSGIINLSGGISANDKVTAGDLMQG-------------WDLFADREALHINLLIAGAVAGEG 382 (660) T ss_pred cCCCccEEEEEeccCCCCcccceeeeccccCccccccchhhhh-------------hhhhhhhhhcccceEEEcCcCCCc Confidence 000000 0000011112344555554322111 11100 111222233345554433221111 Q ss_pred ccccccchhHHHHHHHHHHHhhcccceeEEecCCCcc------hhhHHHHHHHHHHHHhhhhhhhhcccccccccchhhh Q lcl|Aclame:pro 448 KLIGKYDDFAYQLALACAVMSHYNSVTIGIIPTTTPS------DISLAGVEEHVKKLENYANEFYMRDRFGNIIFDADRN 521 (717) Q Consensus 448 ~~~~~~~~~~~~~a~~~~~~s~~~~~~i~ii~~~~~~------~~~~a~v~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 521 (717) . .....+...+..||..+ +.++.++..+... ....+.+.++.+.+..+. ... T Consensus 383 ~--~~~~~v~~al~~~~~~~----~~~~aiid~p~~~~~~~~~~~~~~~~~~~r~~~~~~~----------------~~~ 440 (660) T protein:vir:10 383 D--EVASTVQKHVVSIADER----QDCLAFISPPKGLLVNVPLTRAVDNLIDWRTGAGTFD----------------ANN 440 (660) T ss_pred h--hhhHHHHHHHHHHHHhh----CCEEEEEecCcccccccccccCHHHHHHHHhhccccc----------------ccc Confidence 0 01112334445555543 2344444322111 111222222222111000 011 Q ss_pred hccccceeEEEeCcEEEEecccCcceeechhHHHHHHHhcC----CcccccCCceec---ccccccccCCHHHHHHHHhC Q lcl|Aclame:pro 522 KIDLGQFIEVVAGPDFIVRNTRLGQMASTPDASYIGMVSQL----KTQSAPTNKPLP---SVTALRYTYSANQLNRLTKA 594 (717) Q Consensus 522 ~~~~~~~~~v~~p~~~v~~~~~~~~~~~p~ag~vAGl~A~~----gv~~SpaNk~L~---gv~~l~~~lt~~e~d~L~~~ 594 (717) ....+.|+.++|||+.++++...+.+++|||+++||++|++ |+|+||+|+++. |+.++...+++.|++.||++ T Consensus 441 ~~~~s~~~~~~~p~~~~~d~~~~~~~~~p~sg~~AGl~Ar~D~~~g~~~sPan~~~~~i~g~~~~~~~~~~~e~~~Ln~~ 520 (660) T protein:vir:10 441 MNISTTYAAIDGNYKYQYDKYNDVNRWVPLAADLAGLCARTDDVSQPWMSPAGYNRGQILNVLKLAIEPRQAQRDRMYQE 520 (660) T ss_pred cccCcceEEEEcCceEEecccCCceeEechhHHHHHHHHHhhccCCcEEccCCeeeceeeccceeeecCChhhHHhHhhC Confidence 12236789999999999999999999999999999999975 799999999754 66778889999999999999 Q ss_pred CcEEEEEEcC-ceEEEEeceecCCCCccceeeehhhhHHHHHHHHHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHhCC Q lcl|Aclame:pro 595 RFATFKYKQD-GSIGVVDAPTSAHAGSDYTRLSTARIVKEAVNAVREVADPFIGEPNDTGNRNALTAAVDKRLSKMIENK 673 (717) Q Consensus 595 GI~~ir~~~g-~G~~v~g~rTt~s~ds~~~~I~vrR~~d~I~~~I~~~~~~~IgepN~~~~~~~i~~~I~~fL~~L~~~G 673 (717) |||+|+++++ +|+++||+||+++++++|+||++||++++|+++|++.++|+|||||++.+|.+|++.|+.||++||++| T Consensus 521 gIn~i~~~~~~~G~~~wG~rT~~~~~s~~~~i~vrR~~~~i~~si~~~~~~~v~epn~~~l~~~i~~~i~~fL~~l~~~g 600 (660) T protein:vir:10 521 AINPVVGFAGGDGFVLFGDKTATKVPSPMDHINVRRLFNMLKKNIGDASKYKLFELNDNFTRSSFRMEVSQYLDGIKALG 600 (660) T ss_pred CceEEEEeeCCCcEEEEcccccCCCCcccceEehhhHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCC Confidence 9999999986 799999999997777899999999999999999999999999999999999999999999999999999 Q ss_pred ceecceee---eecChhhhhCCEEEEEEEEEccccccEEEEEEEEeC Q lcl|Aclame:pro 674 ALLGFDFR---LVVTPQQELLGEGSIELSLEAPNELRRLTTIVSLSA 717 (717) Q Consensus 674 aI~G~~~~---~~~t~~~i~~G~l~v~i~v~P~~p~e~I~v~i~~ta 717 (717) +|.||+++ .+|+++++++|+++++|+++|++|+|||+|+|.... T Consensus 601 al~g~~V~~d~~~nt~~di~~G~~~~~i~~~P~~pae~I~~~~~~~~ 647 (660) T protein:vir:10 601 GIYEGRVVCDTTVNTPAVIDRNEFIANIYVKPARSINYITLNFVATS 647 (660) T ss_pred ceeeeEEEEcCCCCCHHHhhCCeEEEEEEEEecCCccEEEEEEEEee Confidence 99999864 367888999999999999999999999999999998 No 13 >protein:vir:104858 Length: 729 # NCBI annotation: T4-like tail sheath protein # Family: family:all:661 # MgeID: mge:1630 # MgeName: P-SSM2 # Cross-refs: genbank:acc:YP_214361;genbank:gi:61806001;genbank:GeneID:3294378 Probab=100.00 E-value=2e-78 Score=446.57 Aligned_cols=660 Identities=12% Similarity=0.069 Sum_probs=303.9 Q ss_pred CC-cchhcccCCceeEEEecCccccCcCCCCCcceeEEEEEeeccCCcccceecC-HHHHHHhhCCcccccCCcchHHHH Q lcl|Aclame:pro 1 MA-GFDQYQAIPGHNARFKDGNLNLKSDPNPRETESVVLLGTATDGPVMQPVRVT-PETAYNIFGKVAHENGVYNGATLL 78 (717) Q Consensus 1 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~gp~~~~~~~~-~~~~~~~fg~~~~~~~~~~~~~~~ 78 (717) |. . | .-||||||+.|.+. +.+++++|++.++||.++|||+++|++|+ ..++++.||++...+ -.++...+ T Consensus 1 m~~~---~-~~PgVyv~e~~~~~---~~i~~v~ts~~~fvG~~~~Gp~~~p~~i~s~~~~~~~fG~~~~~~-~~~~~~~~ 72 (729) T protein:vir:10 1 MPLN---L-ASPGIVVREVDLTI---GRVDPTSGSIGALVAPFAKGPVNDPQLIESEEDLLQTFGQPYSTD-KHYEYWMV 72 (729) T ss_pred CCcc---c-cCCceEEEEecCCC---cccccccccceeEEeccccCCCccCeEcCCHHHHHHHcCccccCC-cchhHHHH Confidence 65 3 2 36999999999999 99999999999999999999999999996 666689999975433 12344555 Q ss_pred HHHHHHHHccCCcEEEEEEecCcceeeeeecccccccccccCCcccceeecCcc-----------cceeeccCCcc-eee Q lcl|Aclame:pro 79 PKFEELWAAGNRDIRLMRTTGVNAVSSLLGTSYSKNSKEVAEDKLGGAQARGNV-----------AATFTLPNGGI-VEA 146 (717) Q Consensus 79 ~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~-~~~ 146 (717) +. ||.|||.+||++|+++..+................+..........+.. .+.+...+.|. -.. T Consensus 73 ~~---~f~ngg~~~~vvRv~~~~~~~a~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~G~~gn~ 149 (729) T protein:vir:10 73 AS---SYLAYGGTMQVVRADDYNTQTGVGLKNAFVTGGVGVGATMLRITSNTHYNQLGYDENTISGVSVAAKNPGTWANG 149 (729) T ss_pred HH---HHHhCCceEEEEecCcccccccccccccccccccccccccccccccccccccccccCCCcceEEEEeccCccccc Confidence 65 4899999999999998755433222211111110000000000000000 01111111111 011 Q ss_pred eEEEeecceeec----CceeEeccccceeeccccccchhheeecCCcccccccceeehhhh----hh-hhh--------e Q lcl|Aclame:pro 147 TFLLKARGVIIP----PNNYTLDVGTEEDMKAGTQPTFAQVLLNENVADMESEITVSYEFT----YK-DAQ--------G 209 (717) Q Consensus 147 ~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~-~A~--------~ 209 (717) ..+...++.... +...+..++.. ..............+.++.-..+ .. +.. . T Consensus 150 ~~v~v~~~~~~~~~~~~~~~~~~~~t~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~s~~ 218 (729) T protein:vir:10 150 IKVAIIDGKADQILTVASGNTTAVGSA-----------VTQSISKTIGTATGTTTIDGVLKGIVTGSTDTTLEVKVISHI 218 (729) T ss_pred eeeEEecccCcceeeeeccccccceee-----------eeeeccccccccccceeeeeeecccccccccccccceecccc Confidence 111111110000 00000000000 00000000000000000000000 00 000 0 Q ss_pred eeeeeeEeecccccccccCcccCCceEEEEEeeccccceeeecCccccccchheeccceeEEEEecCc------cccceE Q lcl|Aclame:pro 210 ETKTSEVLDNNTDKDGKPMIAKGADVTIKLEHVALAGLKLYADGIEVVDAKAFTVAGDQLTIHSNSKM------KLGASL 283 (717) Q Consensus 210 ~~~~gelld~~ie~~~~p~~~~~ag~i~a~r~~~a~~a~~~~~g~~~~~s~~~g~~an~i~v~l~d~~------~t~~~l 283 (717) .+.+..+-...++....+-.. .+.+..+.. ....++.... ..-..+....+.....+. ...... T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~--~~s~~~~a~------~~~~~~~~~~--~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (729) T protein:vir:10 219 SAAGVETAVEYQQNGTYTFDN--SGSVNVIAA------GSSGSGSAKS--YTAQTDWFESQNIVLSNSTLEWDSIADAPG 288 (729) T ss_pred cccccceeccccccceeeecc--cCccceeee------cccccccccc--ceeeeccccccccccccccccccccccccc Confidence 000000000000000000000 000000000 0000000000 000000000000000000 000000 Q ss_pred EEEeeccccc----ccccceEEEeeccccccceEEEEEec-CCceEEEEEeeeccCccceee-eeeeeccccchhHHHHH Q lcl|Aclame:pro 284 EAQYAYNLVE----VIQPVIELESIFGGGVYNDIMRKVES-KDGAVTVTITKPESKRGMISE-DPLVFKSGDYTNFKMLV 357 (717) Q Consensus 284 ~v~~a~~~~~----~~~d~i~l~a~~~G~~GN~i~I~v~~-~~~~~t~~lt~~~~~~~~~~~-~~~~l~~g~~~~~~~lv 357 (717) +..++..... ...........+.|..|+.+...... ..................+.. ..+++..+......... T Consensus 289 t~~~~~~~~~~~d~~~~~~~d~~~~~~~~~g~vve~~~~~s~~~~~~~~~~~~~~~~~vi~~~s~~~~~~~~~~~~~~~~ 368 (729) T protein:vir:10 289 TSTYVSTRGGKNDEIHVLVIDDKGTITGNSGTILEKHLSLSKAKDAEYSVGSSSYWRDFLATNSKYIFGGGATSGITTTG 368 (729) T ss_pred cccccccccccccccceeeeccccccccCcccceeeeeeeeeccccccccccccccceeeccccceeeeccccccccccc Confidence 0000000000 00000111122233333322221100 000000000000000000000 01111111111000000 Q ss_pred HHhhcCccceeEEeeeccccccccccccchhhhhhccCCccCcccchhhhhhhcccccccccchhhhhhhhc--cccccc Q lcl|Aclame:pro 358 DAINNHPFNNVVRARTKPEFEATFTSTLQAAADAKFSGGKDELSLDKEEMYKRLGGEKNEEGFVTKQGAYQY--LENYEV 435 (717) Q Consensus 358 ~~IN~~~~~~~~~a~~~~~~~~~l~s~~~~~~~~~ltgG~dG~~~~a~e~~~al~~~~~~~~~v~~~~~~~~--le~~~v 435 (717) ...+. ............................+.+|.++............ ...... ...++... .+...+ T Consensus 369 ~~~~~--~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~---~~~~~~-~~~g~~~l~~~~~~~~ 442 (729) T protein:vir:10 369 YSVSS--TNTLDTDSGWDQNAEGVNFGASGVATLTLAGGTNYGDKTDLTTSGAL---SSGVDD-IISGYTLFENTEEIEV 442 (729) T ss_pred ccccc--cceeccccccccccccccccccceeEEEeeccccccccccccccccc---ccchhH-HHHHHHHhhccccccc Confidence 00000 00000000000000000001111112234444443322211111000 000000 01111111 122223 Q ss_pred eeEEeccccCCcccccccchhHHHHHHHHHHHhhcccceeEEecCCCcchhhHHHHHHHHHHHHhhhhhhhhcccccc-- Q lcl|Aclame:pro 436 DYVIPLGVHADTKLIGKYDDFAYQLALACAVMSHYNSVTIGIIPTTTPSDISLAGVEEHVKKLENYANEFYMRDRFGN-- 513 (717) Q Consensus 436 d~vi~~~~~a~t~~~~~~~~~~~~~a~~~~~~s~~~~~~i~ii~~~~~~~~~~a~v~~~~~~~~~~~~~~~~~d~~~~-- 513 (717) +.++......+.. ........+..+|..+. .++.++.... ....... .... ...+.... T Consensus 443 ~~~~~~~~~~~~~---~~~~v~~a~~~~~~~~~----~~~a~~~~~~--~~~i~~~------~~~~----~~~~~~~~~~ 503 (729) T protein:vir:10 443 DFILMGAAHHPKE---QSQAVAEKVTAVAEARK----DAVAFISPYR--QAFLNDT------VSGT----VTVSNIDQTT 503 (729) T ss_pred ceeeecCCCCCcc---chHHHHHHHHHHHHhcC----CeEEEecccc--ccccccc------cccc----ccccccchhh Confidence 3333322211111 11223445555665432 2222222110 0000000 0000 00000000 Q ss_pred cccchhhhhccccceeEEEeCcEEEEecccCcceeechhHHHHHHHhcC----CcccccCCceec---ccccccccCCHH Q lcl|Aclame:pro 514 IIFDADRNKIDLGQFIEVVAGPDFIVRNTRLGQMASTPDASYIGMVSQL----KTQSAPTNKPLP---SVTALRYTYSAN 586 (717) Q Consensus 514 ~~~~~~~~~~~~~~~~~v~~p~~~v~~~~~~~~~~~p~ag~vAGl~A~~----gv~~SpaNk~L~---gv~~l~~~lt~~ 586 (717) ......+..+..+.|+.+++||+.++++.....+++|||+++||++|++ |+||||+|+++. |+.++...+++. T Consensus 504 ~~~~~~~~~~~~~~~~~~~~p~~~~~d~~~~~~~~~p~s~~~aGl~a~~d~~~g~~~span~~~~~i~g~~~~~~~~~~~ 583 (729) T protein:vir:10 504 ENVVGFYAPLSSSTYSVFDSGYKYMFDRFNNTFRYVPLNGDIAGTCARTDIEQFPWFSPAGTARGPILNSVKLVYNPGKK 583 (729) T ss_pred HHHHHHHhhccCCceEEEEcCeeEEecccCCceEEechhHHHHHHHHHhhccCCcEEccCCccccceecccceeeecChh Confidence 0001112333456788999999999999888899999999999999985 799999999865 455677789999 Q ss_pred HHHHHHhCCcEEEEEEcCceEEEEeceecCCCCccceeeehhhhHHHHHHHHHHHHHHhccccCCHHHHHHHHHHHHHHH Q lcl|Aclame:pro 587 QLNRLTKARFATFKYKQDGSIGVVDAPTSAHAGSDYTRLSTARIVKEAVNAVREVADPFIGEPNDTGNRNALTAAVDKRL 666 (717) Q Consensus 587 e~d~L~~~GI~~ir~~~g~G~~v~g~rTt~s~ds~~~~I~vrR~~d~I~~~I~~~~~~~IgepN~~~~~~~i~~~I~~fL 666 (717) |++.||++||++|++++++|+++||+||+.+.|++|+||++||++|+|+++|++.++|||||||++.+|.+|++.|+.|| T Consensus 584 ~~~~Ln~~gIn~i~~~~~~G~~~wG~rT~~~~d~~~~~i~vrR~~~~i~~si~~~~~~~v~epn~~~~~~~i~~~i~~~L 663 (729) T protein:vir:10 584 QRDILYSNRINPVILSPGAGIILFGDKTGFGKSSAFDRINVRRLFIYLEDAISAAAKDQLFEFNDELTRTNFVNIVEPFL 663 (729) T ss_pred hHhhhhhCCceEEEEecCCeEEEEcceecCCCCcccceeehhhhHHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHH Confidence 99999999999999999999999999999888999999999999999999999999999999999999999999999999 Q ss_pred HHHHhCCceecceee---eecChhhhhCCEEEEEEEEEccccccEEEEEEEEeC Q lcl|Aclame:pro 667 SKMIENKALLGFDFR---LVVTPQQELLGEGSIELSLEAPNELRRLTTIVSLSA 717 (717) Q Consensus 667 ~~L~~~GaI~G~~~~---~~~t~~~i~~G~l~v~i~v~P~~p~e~I~v~i~~ta 717 (717) ++||++|+|.||+++ .+|+++++.+|+++++|+++|++|+|||+++|.... T Consensus 664 ~~l~~~g~l~g~~v~~d~~~nt~~~i~~G~~~~~v~~~p~~p~e~i~~~~~~~~ 717 (729) T protein:vir:10 664 RDVQAKRGIFDFVVICDETNNTAAVIDSNEFVADIFIKPARSINFIGLTFVATR 717 (729) T ss_pred HHHHhccceeeeEEEEcCCCCCHHHhhCCeEEEEEEEEecCCccEEEEEEEEee Confidence 999999999999864 357888999999999999999999999999998888 No 14 >protein:vir:6594 Length: 666 # NCBI annotation: tail sheath protein # Family: family:all:661 # MgeID: mge:139 # MgeName: RB49 # Cross-refs: genbank:acc:NP_891725;genbank:gi:33620670;genbank:GeneID:1725344 Probab=100.00 E-value=4.3e-78 Score=444.75 Aligned_cols=615 Identities=13% Similarity=0.076 Sum_probs=305.2 Q ss_pred hhcccCCceeEEEecCccccCcCCCCCcceeEEEEEeeccCCcccceecC-HHHHHHhhCCcccccCCcchHHHHHHHHH Q lcl|Aclame:pro 5 DQYQAIPGHNARFKDGNLNLKSDPNPRETESVVLLGTATDGPVMQPVRVT-PETAYNIFGKVAHENGVYNGATLLPKFEE 83 (717) Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~gp~~~~~~~~-~~~~~~~fg~~~~~~~~~~~~~~~~~~~~ 83 (717) =+| --||||||+.|+ . ..+++++|++.++||.++|||+++|++|| ..++++.||++.+.+ ++...+.+ T Consensus 1 ~~~-~~PgVyv~e~~~-~---~~i~~v~ts~~~fvG~~~~Gp~~~p~~v~s~~~~~~~fG~~~~~~---~~~~~~~~--- 69 (666) T protein:vir:65 1 MTL-LSPGFETKETTL-S---TTIVQSETGRAALVGKFQWGPAFQIIQVTNEVELVNKFGQPDNNT---ADYFMSGA--- 69 (666) T ss_pred Cce-ecCceEEEEecC-c---ccccccCcccceEEecccCCCCccCEEecCHHHHHHHcCCccccc---hhHHHHHH--- Confidence 233 359999999973 3 46999999999999999999999999996 666689999986555 23344555 Q ss_pred HHHccCCcEEEEEEecCcceeeeeecccccccccccCCcccceeecCcccceeeccCCcceeeeEEEeecceeecCc-ee Q lcl|Aclame:pro 84 LWAAGNRDIRLMRTTGVNAVSSLLGTSYSKNSKEVAEDKLGGAQARGNVAATFTLPNGGIVEATFLLKARGVIIPPN-NY 162 (717) Q Consensus 84 ~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 162 (717) +|.|||.+||++|+++.++........+.... .+.-+|+ .++...+..+.+.+.-..++. .. T Consensus 70 ~f~ngg~~~~vvrv~~~~~~~~~~~~~~~~~~---------~~~~~g~--------~~~~g~~~~V~~~~~~~~~~~~~~ 132 (666) T protein:vir:65 70 NFLQYGNDLRVVRVLNKEKAKNATALAGNVEF---------EITNEGS--------NYEVGDTIKIKHNRQDIETAGKVT 132 (666) T ss_pred HHHhcCceEEEEEccCcccccccccccCceee---------eEeeccc--------cccccceEEEEecccccccccccc Confidence 58999999999999977554322211111000 0111111 001111111111110000000 00 Q ss_pred EeccccceeeccccccchhheeecCCcccccccceeehhhhhhhhheeeeeeeEeecc--cccccccCcccCCceEEEEE Q lcl|Aclame:pro 163 TLDVGTEEDMKAGTQPTFAQVLLNENVADMESEITVSYEFTYKDAQGETKTSEVLDNN--TDKDGKPMIAKGADVTIKLE 240 (717) Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~gelld~~--ie~~~~p~~~~~ag~i~a~r 240 (717) .++...... .-..++...+..... .+ .+.....+ ..+++.... +.....-......+.+...+ T Consensus 133 ~~~~~~~~~--g~~~~t~~~~~~~~~---~g-----~~~~l~~~-----~~~~~~~~~~~~~~a~sv~~~~~~g~~~~~~ 197 (666) T protein:vir:65 133 KVDGDGKVK--GVFIPTGKIIAHAKA---IG-----VYPELDGG-----WTAEFTSSSGNGSAALSVTKIVTDSGLLLTD 197 (666) T ss_pred ccccccccc--ccccccceeeccccc---cC-----cceeEeec-----cceeecccCcccccceeeeecccccceeeee Confidence 000000000 000000000000000 00 00000000 000000000 00000000000000010001 Q ss_pred eeccccc--------eeeecCccccccchheeccceeEEEEecCccccceEEEEeecccccccccceEEEeeccccccce Q lcl|Aclame:pro 241 HVALAGL--------KLYADGIEVVDAKAFTVAGDQLTIHSNSKMKLGASLEAQYAYNLVEVIQPVIELESIFGGGVYND 312 (717) Q Consensus 241 ~~~a~~a--------~~~~~g~~~~~s~~~g~~an~i~v~l~d~~~t~~~l~v~~a~~~~~~~~d~i~l~a~~~G~~GN~ 312 (717) +..+... .....+........-|...+.+++.+-+.... ......++....+..++. T Consensus 198 ~~~a~~~~~~~~~~~~~~~~~~~a~~A~~~g~~g~~i~v~i~~~~~~---------------~~~~~~l~~~~~~~~~~~ 262 (666) T protein:vir:65 198 LETSRANITNQTFLTKLKKYDMPAVSAIYAGEIGNSLEVEILARSAF---------------KNTAPDLTMYPYGGERTA 262 (666) T ss_pred ecccccccccccccccccccccceeeeeeccccccceeEEeeccccc---------------cccccccccccccccccc Confidence 1100000 00000000000000011111222221111000 000001111111111111 Q ss_pred EEEEEec---CCceEEEEEeeeccCccceeeeeee-eccccch---hHHHHHHHhhcCccceeEEeeecccccccccccc Q lcl|Aclame:pro 313 IMRKVES---KDGAVTVTITKPESKRGMISEDPLV-FKSGDYT---NFKMLVDAINNHPFNNVVRARTKPEFEATFTSTL 385 (717) Q Consensus 313 i~I~v~~---~~~~~t~~lt~~~~~~~~~~~~~~~-l~~g~~~---~~~~lv~~IN~~~~~~~~~a~~~~~~~~~l~s~~ 385 (717) .+-.+.. .+...+..+... +...+.... ...++.. ....+.+.+.+... ..+.+..... .. T Consensus 263 ~~~~~~~~~~~~~~~~~~v~~~----g~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~~~-------~~ 330 (666) T protein:vir:65 263 ARNLIPYAPQNDNQYAFIVRRD----GVVVESYVLSTLKGDKDVYGNSIYMDDFFARGSS-QYIYATAQGW-------VD 330 (666) T ss_pred ceeeecccccccccceeeeecC----CcccceeecccCcccccccchhhhhhhhhccccc-ceeeeecccc-------cc Confidence 1111100 000011111100 111111100 0001100 00011111111111 0111100000 00 Q ss_pred chhhhhhccCCccCcccchhhhhhhcccccccccch-hhhhhhhccccccceeEEeccccCCcccccccchhHHHHHHHH Q lcl|Aclame:pro 386 QAAADAKFSGGKDELSLDKEEMYKRLGGEKNEEGFV-TKQGAYQYLENYEVDYVIPLGVHADTKLIGKYDDFAYQLALAC 464 (717) Q Consensus 386 ~~~~~~~ltgG~dG~~~~a~e~~~al~~~~~~~~~v-~~~~~~~~le~~~vd~vi~~~~~a~t~~~~~~~~~~~~~a~~~ 464 (717) .......+.+|.++....++.+. . ....+.. ....++...+...+++++..+...+. .....+...+..+| T Consensus 331 ~~~~~~~~~~g~~~~~~~~~~~g-~----~~~~~~~~~~~~~~~~~~~~~~~~l~~p~~~~~~---~~~~~v~~~l~~~~ 402 (666) T protein:vir:65 331 GFSGIISLAGGVSANEATTGGVG-A----DPFIGAMMQGWDLFAERESIHVNLLIAGACAGEG---DAFSTVQKHAVSIG 402 (666) T ss_pred cccceEEccCCCCcCcccccccc-c----ccccccHHHHHHHHhhhhhccCCceeecCcCCcc---chhHHHHHHHHHHH Confidence 01112345666665443332110 0 0000000 00112222233345544332221111 11223445566666 Q ss_pred HHHhhcccceeEEecCC------CcchhhHHHHHHHHHHHHhhhhhhhhcccccccccchhhhhccccceeEEEeCcEEE Q lcl|Aclame:pro 465 AVMSHYNSVTIGIIPTT------TPSDISLAGVEEHVKKLENYANEFYMRDRFGNIIFDADRNKIDLGQFIEVVAGPDFI 538 (717) Q Consensus 465 ~~~s~~~~~~i~ii~~~------~~~~~~~a~v~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~v~~p~~~v 538 (717) ..+.. ++.++... .+.....+.+..+.+.+... ........+.|..++|||+++ T Consensus 403 ~~~~~----~~a~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~s~~~~~~~p~~~~ 462 (666) T protein:vir:65 403 DERQD----CLVMVSPPRSTVVNIPVTTAIDNLIAWREGSGNY----------------NENNMNINTTYAVIDGNYKYQ 462 (666) T ss_pred hhccc----eEEEeccccceeeecCCCCCHHHHHHHHHhcccc----------------cccccccCcceEEEEcCceEE Confidence 54422 22222111 11111222222222211110 001112235789999999999 Q ss_pred EecccCcceeechhHHHHHHHhcC----CcccccCCcee---cccccccccCCHHHHHHHHhCCcEEEEEEcCceEEEEe Q lcl|Aclame:pro 539 VRNTRLGQMASTPDASYIGMVSQL----KTQSAPTNKPL---PSVTALRYTYSANQLNRLTKARFATFKYKQDGSIGVVD 611 (717) Q Consensus 539 ~~~~~~~~~~~p~ag~vAGl~A~~----gv~~SpaNk~L---~gv~~l~~~lt~~e~d~L~~~GI~~ir~~~g~G~~v~g 611 (717) +++..+..+++|||+++||++|++ |+|+||+|+++ .|+.++...+++.|++.||++||+||++++++|+++|| T Consensus 463 ~d~~~~~~~~~p~sg~vAGl~Ar~D~~~g~~~span~~~~~i~g~~~~~~~~~~~~~~~Ln~~gIn~i~~~~~~G~~~wG 542 (666) T protein:vir:65 463 YDKYNDVNRWVPLAADIAGLCARTDAVSQPWMSPAGYNRGQIMNVVKLAIEPRKAHRDRLYQAAINPVIGAGGEGFILMG 542 (666) T ss_pred ecccCCceeEechHHHHHHHHHHHhccCCcEEccCCeecceeeccccceeecChhHHHhhhhCCceEEEEeCCCeEEEEe Confidence 999989999999999999999975 79999999964 45667888999999999999999999999999999999 Q ss_pred ceecCCCCccceeeehhhhHHHHHHHHHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHhCCceecceee---eecChhh Q lcl|Aclame:pro 612 APTSAHAGSDYTRLSTARIVKEAVNAVREVADPFIGEPNDTGNRNALTAAVDKRLSKMIENKALLGFDFR---LVVTPQQ 688 (717) Q Consensus 612 ~rTt~s~ds~~~~I~vrR~~d~I~~~I~~~~~~~IgepN~~~~~~~i~~~I~~fL~~L~~~GaI~G~~~~---~~~t~~~ 688 (717) +||+++.+++|+||++||++++|+++|++.++|++||||++.+|.+|++.|+.||++||++|+|.||+++ .+|++++ T Consensus 543 ~rT~~~~~s~~~~i~vrR~~~~i~~si~~~~~~~v~epn~~~l~~~i~~~i~~~L~~l~~~gal~g~~V~~d~~~nt~~~ 622 (666) T protein:vir:65 543 DKTATTVPSPFDRINVRRLFNMLKKNIGDSSKYKLFENNDNFTRASFRMEVSQYLSTIRSLGGIYDFRVQCDTTNNTPDV 622 (666) T ss_pred cccCCCCCcccceEehhhHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeEEEEcCCCCCHHH Confidence 9999877789999999999999999999999999999999999999999999999999999999999864 3678889 Q ss_pred hhCCEEEEEEEEEccccccEEEEEEEEeC Q lcl|Aclame:pro 689 ELLGEGSIELSLEAPNELRRLTTIVSLSA 717 (717) Q Consensus 689 i~~G~l~v~i~v~P~~p~e~I~v~i~~ta 717 (717) +++|+++++|+++|++|+|||+++|...+ T Consensus 623 i~~G~~~~~i~~~p~~pae~i~~~~~~~~ 651 (666) T protein:vir:65 623 IDRNEFVASMFIKPAKSINYIMLNFTAVA 651 (666) T ss_pred hhCCeEEEEEEEEecCCcceEEEEEEEee Confidence 99999999999999999999999999998 No 15 >protein:vir:100539 Length: 663 # NCBI annotation: gp18 tail sheath monomer # Family: family:all:661 # MgeID: mge:1488 # MgeName: 25 # Cross-refs: genbank:acc:YP_656380;genbank:gi:109290131;genbank:GeneID:4156517 Probab=100.00 E-value=6.9e-78 Score=443.61 Aligned_cols=596 Identities=12% Similarity=0.075 Sum_probs=319.3 Q ss_pred hhcccCCceeEEEecCccccCcCCCCCcceeEEEEEeeccCCcccceecC-HHHHHHhhCCcccccCCcchHHHHHHHHH Q lcl|Aclame:pro 5 DQYQAIPGHNARFKDGNLNLKSDPNPRETESVVLLGTATDGPVMQPVRVT-PETAYNIFGKVAHENGVYNGATLLPKFEE 83 (717) Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~gp~~~~~~~~-~~~~~~~fg~~~~~~~~~~~~~~~~~~~~ 83 (717) =+|. -||||||+.|+ . ..+++++|++.++||.++|||+++|++|+ ..++++.||++.+.+ +++..+++| T Consensus 1 ~~~~-~Pgvyv~e~~~-~---~~~~~v~t~~~~fvG~~~~gp~~~p~~i~s~~~~~~~fG~~~~~~---~~~~~v~~~-- 70 (663) T protein:vir:10 1 MALL-SPGIEMKETSI-N---STVVRSATGRAALVGKFAWGPAYEIRQVTNEVELVDMFGSPDNVT---APYFMSAMN-- 70 (663) T ss_pred Cccc-cCceEEEEecC-c---ccccccccccceeeeccccCCCCcCEEecCHHHHHHHcCCccccc---chHHHHHHH-- Confidence 2332 49999999974 3 45899999999999999999999999996 566699999986655 345667765 Q ss_pred HHHccCCcEEEEEEecCcceeeeeecccccccccccCCcccceeecCcccceeeccCCcceeeeEEEeecceeecCceeE Q lcl|Aclame:pro 84 LWAAGNRDIRLMRTTGVNAVSSLLGTSYSKNSKEVAEDKLGGAQARGNVAATFTLPNGGIVEATFLLKARGVIIPPNNYT 163 (717) Q Consensus 84 ~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (717) |.|||.+||++|+++.++........+....+..+ + ...|.+.-. . .+.+.... T Consensus 71 -f~ngg~~~~vvRv~~~~~~~~~~~~~~~~~~~~~~----~--~~~~~~g~~-----------~--------~v~~~~~~ 124 (663) T protein:vir:10 71 -FLQYGNDLRLVRVIDMEQAKNASPLFNQIEVTITT----E--GQGYTVGDT-----------V--------SIKHNTTT 124 (663) T ss_pred -HHhCCCeEEEEecCCcccccccccccccceeeEee----c--ccCccccce-----------e--------eecccccc Confidence 99999999999999764433221111111110000 0 000111111 0 01111111 Q ss_pred eccccceeeccccccchhheeecCCcccccccceeehhhhhhhhheeeeeeeEeecccccccccCcccCCceEEEEEeec Q lcl|Aclame:pro 164 LDVGTEEDMKAGTQPTFAQVLLNENVADMESEITVSYEFTYKDAQGETKTSEVLDNNTDKDGKPMIAKGADVTIKLEHVA 243 (717) Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~gelld~~ie~~~~p~~~~~ag~i~a~r~~~ 243 (717) ...... ....+.......+.. +.+ .....++.. ..... ...+|.... ..+.. T Consensus 125 ~~~~~~-~~~~~~~g~~~~~~~--~~a-----------~~~~~a~~~----~~~~~-~~~a~~~~v---------~~~~~ 176 (663) T protein:vir:10 125 VTEEGK-VTKVDADGKIKALFV--PSS-----------AVIAKAKQL----GTYPV-LGDNWRAEV---------SGASG 176 (663) T ss_pred cccCcc-eeeeccCCceeEEEe--ccc-----------ccccccccc----ccccc-cccceeeEE---------eeccc Confidence 111000 000000000000000 000 000000000 00000 000010000 00000 Q ss_pred cccceeeecCccccccchheeccceeEEEEecCcccc-ceEEEEeecccccccccceEEEeeccccccceEEEEEecCCc Q lcl|Aclame:pro 244 LAGLKLYADGIEVVDAKAFTVAGDQLTIHSNSKMKLG-ASLEAQYAYNLVEVIQPVIELESIFGGGVYNDIMRKVESKDG 322 (717) Q Consensus 244 a~~a~~~~~g~~~~~s~~~g~~an~i~v~l~d~~~t~-~~l~v~~a~~~~~~~~d~i~l~a~~~G~~GN~i~I~v~~~~~ 322 (717) .....+...++. . ...+++...+..... .+.++. .....+....+.+.++|.+||.+.+.+..... T Consensus 177 ~~~~a~av~~i~--------~-dg~vt~~~~~~a~~~~~~~~~~----~~~~~~~~~~~~a~~~g~~G~~i~v~~~~~~~ 243 (663) T protein:vir:10 177 GSAATLTLGGIV--------V-DSGVTFGNSEEAPDVMTSTKVL----ANFAKYGMPLISAVYPGEIGSTVEVEVISKTA 243 (663) T ss_pred cccccceeEeee--------c-CCceeEEeeeccccccccceee----eeccccccceeeeecccccCcceeEeeccccc Confidence 000011111110 0 011222211111111 111111 11112334567788899999999888743322 Q ss_pred eE---EEEEeeeccCccceee------------------------eeeeecc--ccch---hHHHHHHHhhcCccceeEE Q lcl|Aclame:pro 323 AV---TVTITKPESKRGMISE------------------------DPLVFKS--GDYT---NFKMLVDAINNHPFNNVVR 370 (717) Q Consensus 323 ~~---t~~lt~~~~~~~~~~~------------------------~~~~l~~--g~~~---~~~~lv~~IN~~~~~~~~~ 370 (717) .. ...+............ ....+.. ++.. ....+.+.+.+.. ...+. T Consensus 244 ~~~~~~~~v~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~e~~~ls~~~~~~~~~~~~~~~~~~~~~~~-s~~v~ 322 (663) T protein:vir:10 244 FQSGAAQPIYPFGGTRASNARSVIQYGPMTDDQFAIIVRRDGIVVESTVLSTRRGDRDVYGNNIFMDDYFRNGS-SNFIY 322 (663) T ss_pred ccccceeeecccCcccccccccccccccccchhhcccccCCCcccceeeeeccccccccchhhhhhhhhhcCcc-cceeE Confidence 11 1111110000000000 0000000 0000 0000111111100 00000 Q ss_pred eeeccccccccccccchhhhhhccCCccCcccch-hhhhhhcccccccccchhhhhhhhccccccceeEEeccccCCccc Q lcl|Aclame:pro 371 ARTKPEFEATFTSTLQAAADAKFSGGKDELSLDK-EEMYKRLGGEKNEEGFVTKQGAYQYLENYEVDYVIPLGVHADTKL 449 (717) Q Consensus 371 a~~~~~~~~~l~s~~~~~~~~~ltgG~dG~~~~a-~e~~~al~~~~~~~~~v~~~~~~~~le~~~vd~vi~~~~~a~t~~ 449 (717) +.. ...+........+.+|.++..... .++...+ ..+..++..+...+++....++.. T Consensus 323 ~~~-------~~~~~~~~~~~~l~gg~~~~~~~~~~d~~~~~-------------~~l~~~~~~~~~~~i~~~~~~~~~- 381 (663) T protein:vir:10 323 ASS-------VNWPAGFTGIIQLGGGASANNAVGSDELIAGW-------------DLFADREALHVNLMIAGACKSDGV- 381 (663) T ss_pred eec-------cccCcccceeEEecccccCcccchhhhhhhHH-------------hhhccccccCceEEEeecCCCCch- Confidence 000 000000111124556665543222 2221111 111223333334444443332221 Q ss_pred ccccchhHHHHHHHHHHHhhcccceeEEecCCCcchh------hHHHHHHHHHHHHhhhhhhhhcccccccccchhhhhc Q lcl|Aclame:pro 450 IGKYDDFAYQLALACAVMSHYNSVTIGIIPTTTPSDI------SLAGVEEHVKKLENYANEFYMRDRFGNIIFDADRNKI 523 (717) Q Consensus 450 ~~~~~~~~~~~a~~~~~~s~~~~~~i~ii~~~~~~~~------~~a~v~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 523 (717) .....+...+..+|..+ +.++.++..+..... ..+.+..+.+.+.... ........ T Consensus 382 -~~~~~v~~~l~~~~~~~----~~~~ai~d~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~ 443 (663) T protein:vir:10 382 -AVASTVQKHVVALADDR----QDCVAFVNPPSELLVGVPTTQAVKNIVEWRNGVTTGG-------------EVVDNNMN 443 (663) T ss_pred -hhHHHHHHHHHHHHHhh----CCEEEEEecCcccccccchhhhHHHHHHHhhhccccc-------------hhhhhhcc Confidence 01112333444455432 234455433221111 1111111111110000 00011222 Q ss_pred cccceeEEEeCcEEEEecccCcceeechhHHHHHHHhcC----CcccccCCcee---cccccccccCCHHHHHHHHhCCc Q lcl|Aclame:pro 524 DLGQFIEVVAGPDFIVRNTRLGQMASTPDASYIGMVSQL----KTQSAPTNKPL---PSVTALRYTYSANQLNRLTKARF 596 (717) Q Consensus 524 ~~~~~~~v~~p~~~v~~~~~~~~~~~p~ag~vAGl~A~~----gv~~SpaNk~L---~gv~~l~~~lt~~e~d~L~~~GI 596 (717) ..+.|+.++|||++++++.....+++|||+++||++|++ |+|+||+|+.+ .|+.++...+++.|++.||++|| T Consensus 444 ~~s~~~~l~~p~~~~~d~~~~~~~~~p~s~~vAGl~Ar~D~~~g~~~span~~~~~i~g~~~~~~~~~~~~~~~Ln~~gi 523 (663) T protein:vir:10 444 ISSTYAFISGNYKYQYDKYNDINRWVPLSADIAGLCAYTDQVGHPWMSPAGYRRGQLRNTIKLAIEPKQSLRDTMYQVSI 523 (663) T ss_pred cCcceEEEEecceeEecccCCceEEechHHHHHHHHHHhhccCCcEEccCCeeecceeccccceeecCchhHHHHHhCCC Confidence 346789999999999999999999999999999999974 79999999964 46677778899999999999999 Q ss_pred EEEEEEcC-ceEEEEeceecCCCCccceeeehhhhHHHHHHHHHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHhCCce Q lcl|Aclame:pro 597 ATFKYKQD-GSIGVVDAPTSAHAGSDYTRLSTARIVKEAVNAVREVADPFIGEPNDTGNRNALTAAVDKRLSKMIENKAL 675 (717) Q Consensus 597 ~~ir~~~g-~G~~v~g~rTt~s~ds~~~~I~vrR~~d~I~~~I~~~~~~~IgepN~~~~~~~i~~~I~~fL~~L~~~GaI 675 (717) |+|+.+++ +|+++||+||+++++++|+||++||++++|+++|++.++|++||||++.+|.+|++.|+.||++||++|+| T Consensus 524 n~i~~~~~~~G~~~wG~rT~s~~~s~~~~i~vrR~~~~i~~si~~~~~~~v~epn~~~l~~~i~~~i~~~L~~l~~~gal 603 (663) T protein:vir:10 524 NPVTGFAGGDGFVLFGDKMATQVPSPFDRINVRRLFNMLKKNIGDTSKYELFENNDAFTRQSFRMEVSQYLDNIRSLGGV 603 (663) T ss_pred cEEEEeeCCCcEEEEcccccCCCCcccceEehhhHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCce Confidence 99999987 79999999999877789999999999999999999999999999999999999999999999999999999 Q ss_pred ecceee---eecChhhhhCCEEEEEEEEEccccccEEEEEEEEeC Q lcl|Aclame:pro 676 LGFDFR---LVVTPQQELLGEGSIELSLEAPNELRRLTTIVSLSA 717 (717) Q Consensus 676 ~G~~~~---~~~t~~~i~~G~l~v~i~v~P~~p~e~I~v~i~~ta 717 (717) .||+++ .+|+++++++|+++++|+++|++|+|||+|+|..+. T Consensus 604 ~gf~V~~d~~~nt~~~i~~G~~~~~i~~~p~~pae~I~~~~~~~~ 648 (663) T protein:vir:10 604 YDFRVVCDTTNNTPQVIDSNEFVATIYIKAPRSINYITLNFVATS 648 (663) T ss_pred eeeEEEEcCCCCCHHHhhCCeEEEEEEEEecCCcceEEEEEEEEe Confidence 999864 367888999999999999999999999999999998 No 16 >protein:vir:104477 Length: 749 # NCBI annotation: gp18 # Family: family:all:661 # MgeID: mge:1548 # MgeName: P-SSM4 # Cross-refs: genbank:acc:YP_214663;genbank:gi:61806304;genbank:GeneID:3294532 Probab=100.00 E-value=6.7e-77 Score=438.18 Aligned_cols=665 Identities=14% Similarity=0.089 Sum_probs=318.6 Q ss_pred CCcchhcccCCceeEEEecCccccCcCCCCCcceeEEEEEeeccCCcccceecC-HHHHHHhhCCcccccCCcchHHHHH Q lcl|Aclame:pro 1 MAGFDQYQAIPGHNARFKDGNLNLKSDPNPRETESVVLLGTATDGPVMQPVRVT-PETAYNIFGKVAHENGVYNGATLLP 79 (717) Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~gp~~~~~~~~-~~~~~~~fg~~~~~~~~~~~~~~~~ 79 (717) |+. ..--|||+||+.|.+. .+++.+|++.++||.++|||+++|++|+ ..++++.||++.+.+ ++..+++ T Consensus 1 M~~---~~~~PgVyv~e~~~~~----~~~~~~t~~~~fvG~~~~Gp~~~p~~v~s~~~~~~~fG~~~~~~---~~~~~v~ 70 (749) T protein:vir:10 1 MAT---NQSSPGVVIQERDLTT----VSTIPTANVGVIAAPFTKGPVEEVIEITSERQLAEKFGEPNESN---YEYWFSA 70 (749) T ss_pred CCc---cccCCeeEEEEecCCc----ccccccCceeEEEeccCCCCCccCEEcCCHHHHHHHcCCccCCc---ccHHHHH Confidence 763 1224999999999764 3778999999999999999999999995 666699999986544 3444455 Q ss_pred HHHHHHHccCCcEEEEEEecCcceeeeeecc----cccc---cccccC--CcccceeecCcccceeecc--CCcceeeeE Q lcl|Aclame:pro 80 KFEELWAAGNRDIRLMRTTGVNAVSSLLGTS----YSKN---SKEVAE--DKLGGAQARGNVAATFTLP--NGGIVEATF 148 (717) Q Consensus 80 ~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~----~~~~---~~~~~~--~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 148 (717) + ||+|||.+||++|+.|..+.-...+-. ++.. .....+ ...-.|.-||.|+-.+++. +++.-... T Consensus 71 ~---~F~ngg~~~~vvRv~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~pG~~gn~l~v~v~~~~~~~~~- 146 (749) T protein:vir:10 71 A---QFLSYGGLLKTIRVNSSSLKNAVDTGTAPLVKNLQDYETSIEDASNNFSWVARTPGDTGNSIGIFVTDAGADQVV- 146 (749) T ss_pred H---HHhhcCCeEEEEEccCccccccccccccccccccccccccccccccceEEEeccCCCcCCceEEEEEcCCCceee- Confidence 5 599999999999998875432211000 0000 000000 1111244566666433322 22221110 Q ss_pred EEeecceeecCceeEeccccceeeccccccc---hhheee---cCCcccccccceeehhhhhhhhheee--eee-eEeec Q lcl|Aclame:pro 149 LLKARGVIIPPNNYTLDVGTEEDMKAGTQPT---FAQVLL---NENVADMESEITVSYEFTYKDAQGET--KTS-EVLDN 219 (717) Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~---~~~~~~~~~~~~~~~~~~~~~A~~~~--~~g-elld~ 219 (717) .+..........++.+... ....+.... .-.... ..+....+...++.... ...+-... .++ ..+. T Consensus 147 -~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~-~~~a~~~~~~~~~~~~~~- 221 (749) T protein:vir:10 147 -VVPAPGSGNEHEFVADAAV--SAASGAAGKVFKYSIILTIDDVVGTFAPGSATTITIGG-SAESVNVLAYDATNKKLE- 221 (749) T ss_pred -eeecCCccceeeEEeeecc--cccccccccccccceeeeeccccceeecccceeeeccC-cccccccccccCCcceEE- Confidence 0000000000111111100 000000000 000000 00000000000110000 00000000 000 0000 Q ss_pred ccccccccCcccCCceEEEE------Eeeccccc---------eeeecCccccccchheeccceeEEE--EecCccccce Q lcl|Aclame:pro 220 NTDKDGKPMIAKGADVTIKL------EHVALAGL---------KLYADGIEVVDAKAFTVAGDQLTIH--SNSKMKLGAS 282 (717) Q Consensus 220 ~ie~~~~p~~~~~ag~i~a~------r~~~a~~a---------~~~~~g~~~~~s~~~g~~an~i~v~--l~d~~~t~~~ 282 (717) +.. ++. +++...+. ......++ .....++. +.-..=..+++..++. .......... T Consensus 222 -~~~---~s~--~~~~~~a~~~~v~~~~~~~~~~~~i~~~~~~~~~~~~~~-~a~~~~~~~~~g~~~~it~v~~~~~~~~ 294 (749) T protein:vir:10 222 -IGL---PSG--GVTGILADNQVITQGTNTAKINVTIERKLLVALNKSSIE-FAASDVVQDTNSTNITITSVRDEYTERE 294 (749) T ss_pred -Eee---ecc--cccceeeeeecccccccccccccccccchhhhhccccce-eeccccccCCccceeEEEeeeccccccc Confidence 000 000 00111110 00000000 01111110 0000111122222222 1111000000 Q ss_pred -EEEEeecccccccccce-EEEeeccccccceEEEEEecCCceEEEEEeeeccCccceeeeeeeecc-----ccchhHHH Q lcl|Aclame:pro 283 -LEAQYAYNLVEVIQPVI-ELESIFGGGVYNDIMRKVESKDGAVTVTITKPESKRGMISEDPLVFKS-----GDYTNFKM 355 (717) Q Consensus 283 -l~v~~a~~~~~~~~d~i-~l~a~~~G~~GN~i~I~v~~~~~~~t~~lt~~~~~~~~~~~~~~~l~~-----g~~~~~~~ 355 (717) .+....+.. ...+.. .+.+. .|...+.+.+.+...++..+-.. +.+-+....+.. -.+.+... T Consensus 295 ~~t~~~~~~~--a~~~gt~~~~~~-~~g~~D~~~v~v~~~~g~~~~~~-------g~v~e~~~~~~~~~~~~~~~~~~~~ 364 (749) T protein:vir:10 295 YLPGVKWINV--APRPGTSLYANG-VGGHRDEMHVILVDIDGGVTGTV-------GALLERYIDVSKASDAKTSVGETNY 364 (749) T ss_pred cccceeeccc--cccccceeeeec-ccCCCCceEEEEecCCCeeeecc-------cceeeeeeeccccccccccccccch Confidence 000000000 000000 11111 12223444444332222211100 011000000000 00011112 Q ss_pred HHHHhhcCccceeEEeeeccccccccccccchhhhhhccCCccCc---ccchhhhhhhcccccccccchhhhhhhhcccc Q lcl|Aclame:pro 356 LVDAINNHPFNNVVRARTKPEFEATFTSTLQAAADAKFSGGKDEL---SLDKEEMYKRLGGEKNEEGFVTKQGAYQYLEN 432 (717) Q Consensus 356 lv~~IN~~~~~~~~~a~~~~~~~~~l~s~~~~~~~~~ltgG~dG~---~~~a~e~~~al~~~~~~~~~v~~~~~~~~le~ 432 (717) +.+.++..+..........+....... ...+.-+. ....+.+.... +.... ......+..... T Consensus 365 ~~~~~~~~s~~v~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~-~~~~~---~~~~~~~~~~~~ 430 (749) T protein:vir:10 365 YAEVIKQKSEFIYWAEHESTLYAATSS----------ASDGLFGQTAANRQFNLFRSAA-GSVDY---PAGVTTLGSKNN 430 (749) T ss_pred hhhhhccCCCEEEEEeccccccccccc----------ccccccccccccceeecccccc-cccee---ccccccccccCC Confidence 233444433222211110000000000 00000000 00000000000 00000 000000000000 Q ss_pred ccceeEEeccccCCcccccccch-hHHHHHHHHHHHhhcc--cceeEEecCC-CcchhhHHHHHHHHHHHHhhhhhhhhc Q lcl|Aclame:pro 433 YEVDYVIPLGVHADTKLIGKYDD-FAYQLALACAVMSHYN--SVTIGIIPTT-TPSDISLAGVEEHVKKLENYANEFYMR 508 (717) Q Consensus 433 ~~vd~vi~~~~~a~t~~~~~~~~-~~~~~a~~~~~~s~~~--~~~i~ii~~~-~~~~~~~a~v~~~~~~~~~~~~~~~~~ 508 (717) . ...+....-.+......... ................ .....+++.. ...+...+.....+..|+++...+.++ T Consensus 431 ~--~~~~~~~gg~d~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~li~~~~~~~~~~~~~v~~al~~~~~~~~~~~~~~ 508 (749) T protein:vir:10 431 A--TYYYRLSGGVNYTVSAGQYTITNTDIGSAYELIGDPESQIVDFIISGPSGTSDANALAKITSLVNIAEERRDCMVFV 508 (749) T ss_pred c--EEEEEccCCcccccccccccccchhHHHHHHHhhhhhhcccceEEEecCCCCcchhHHHHHHHHHHHhhcCCEEEEE Confidence 0 00000000011100000000 0001111111111111 1111222211 122223344555666777777766666 Q ss_pred ccccccccc------------hhhhhccccceeEEEeCcEEEEecccCcceeechhHHHHHHHhcC----CcccccCCce Q lcl|Aclame:pro 509 DRFGNIIFD------------ADRNKIDLGQFIEVVAGPDFIVRNTRLGQMASTPDASYIGMVSQL----KTQSAPTNKP 572 (717) Q Consensus 509 d~~~~~~~~------------~~~~~~~~~~~~~v~~p~~~v~~~~~~~~~~~p~ag~vAGl~A~~----gv~~SpaNk~ 572 (717) +.+.....+ ..+.....+.|+.+++||++++++..+..+++|||+++||++|++ |+|+||+|++ T Consensus 509 d~p~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~p~~~~~d~~~~~~~~~p~s~~vAGl~Ar~D~~~g~~~SPan~~ 588 (749) T protein:vir:10 509 SPRRGNVIGISNTTTITTNIVDFFKKLPSSSYMVFDSGYKYIYDKYNDVYRYIPCNGDTAGLCLQTNEISEPWFSPAGFQ 588 (749) T ss_pred cCCCCcccccccchhhhhHHHHHHhhccCceeEEEEccceeeeccccCceEEechHHHHHHHHHHhhccCCcEECcCCce Confidence 654332111 011222346789999999999999888899999999999999986 7999999986 Q ss_pred ---ecccccccccCCHHHHHHHHhCCcEEEEEEcCceEEEEeceecCCCCccceeeehhhhHHHHHHHHHHHHHHhcccc Q lcl|Aclame:pro 573 ---LPSVTALRYTYSANQLNRLTKARFATFKYKQDGSIGVVDAPTSAHAGSDYTRLSTARIVKEAVNAVREVADPFIGEP 649 (717) Q Consensus 573 ---L~gv~~l~~~lt~~e~d~L~~~GI~~ir~~~g~G~~v~g~rTt~s~ds~~~~I~vrR~~d~I~~~I~~~~~~~Igep 649 (717) |.|+.++...+++.|++.||++|||||++++++|+++||+||+.+.|++|+||++||++|+|+++|++.++||+||| T Consensus 589 ~~~i~g~~~~~~~~~~~e~~~Ln~~gIn~i~~~~g~G~~~wG~rT~~s~d~~~~~i~vRRl~~~ie~si~~~~~~~v~ep 668 (749) T protein:vir:10 589 RGVLRNAIKLAYTPNKAQRDQLYANRVNPIVSFPGQGVVLYGDKTALGFASAFDRINIRRLFLTVERVISTAAKAQLFEQ 668 (749) T ss_pred eeeeeccccceeecChhHHHhhhhCCceEEEEecCCeEEEEcceecCCCCcccceeehhhhHHHHHHHHHHHHHHhhcCC Confidence 66788899999999999999999999999999999999999998889999999999999999999999999999999 Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCceecceeee---ecChhhhhCCEEEEEEEEEccccccEEEEEEEEeC Q lcl|Aclame:pro 650 NDTGNRNALTAAVDKRLSKMIENKALLGFDFRL---VVTPQQELLGEGSIELSLEAPNELRRLTTIVSLSA 717 (717) Q Consensus 650 N~~~~~~~i~~~I~~fL~~L~~~GaI~G~~~~~---~~t~~~i~~G~l~v~i~v~P~~p~e~I~v~i~~ta 717 (717) |++.+|.+|++.|+.||++||++|+|.+|+++. +|+|+++++|+++++|+++|++|+|||+++|..++ T Consensus 669 n~~~l~~~i~~~i~~fL~~l~~~G~i~~f~V~~d~~~Nt~~~i~~G~~~~~i~~~P~~pae~I~~~~~~~~ 739 (749) T protein:vir:10 669 NDEAQRSLFINIVEPYLRDVQGRRGVVDFLVKCDSTNNTPEAVDRGEFYAEVFLKPTRTINYVQLTFVATR 739 (749) T ss_pred CCHHHHHHHHHHHHHHHHHHHhcCCeeeeEEEEcCCCCCHHHhhCCEEEEEEEEEecCCccEEEEEEEEee Confidence 999999999999999999999999999998753 68888999999999999999999999999999887 No 17 >protein:vir:80488 Length: 562 # NCBI annotation: Tsh # Family: family:all:2449 # MgeID: mge:1883 # MgeName: A511 # Cross-refs: genbank:acc:YP_001468473;genbank:gi:157325048;genbank:GeneID:5601446 Probab=100.00 E-value=5e-75 Score=427.92 Aligned_cols=493 Identities=15% Similarity=0.156 Sum_probs=356.1 Q ss_pred eEE-EeecceeecCcee-EeccccceeeccccccchhheeecCCcccccccceeehhhhhhhhheeeeeeeEeecccccc Q lcl|Aclame:pro 147 TFL-LKARGVIIPPNNY-TLDVGTEEDMKAGTQPTFAQVLLNENVADMESEITVSYEFTYKDAQGETKTSEVLDNNTDKD 224 (717) Q Consensus 147 ~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~gelld~~ie~~ 224 (717) .-+ +|.+-....|..| ..|++.+..+... +.++.+..|.+..|.+.++...++++|||..|++|+||++ |++| T Consensus 1 ~~~~~~~~~~~~~pgv~~~~~~s~~~~~~~~----~~~~~~~ig~a~~G~~~~~~~~~~~~~~~~~f~~g~l~~~-i~~a 75 (562) T protein:vir:80 1 MAIEIYPRKPVSRPHTEISVDTSGIGGSSSG----SEKILCLVGSATGGKPNAVYKVRNYSQAKSVFRSGELLDA-IERA 75 (562) T ss_pred CeeeeeCCCcccCCceEEEEecCCcccCCCC----CCceEEEEEEeCCCCcceeEEEccHHHHHHHhcCCChHHH-HHHh Confidence 122 4544446667777 7777766444444 4455555699999999999999999999999999999998 9999 Q ss_pred cccCcccCCceEEEEEeeccccceeeecCccccccchheeccceeEEEEecCcccc-ceEEEEeecccccccccceEEEe Q lcl|Aclame:pro 225 GKPMIAKGADVTIKLEHVALAGLKLYADGIEVVDAKAFTVAGDQLTIHSNSKMKLG-ASLEAQYAYNLVEVIQPVIELES 303 (717) Q Consensus 225 ~~p~~~~~ag~i~a~r~~~a~~a~~~~~g~~~~~s~~~g~~an~i~v~l~d~~~t~-~~l~v~~a~~~~~~~~d~i~l~a 303 (717) |+|+...|+|.+|||||+++++++++++|++ |+|++||+.+|+||++|++++.++ +++++.|.+..+..+++ T Consensus 76 ~~~~~~~g~~~~~~~rv~~a~~a~~~~~~~~-~~~~~~g~~~n~i~v~~~~~~~~~~~~~~v~~~~~~~~ev~~------ 148 (562) T protein:vir:80 76 WNPGEGTGAGDILAMRVEEAKEATFEAEGVK-VSSTIYGADANDIQVALEDNTITGTKRLSIVFAKERVNQVYD------ 148 (562) T ss_pred cccccccCceEEEEEEcCCCCcceEEecceE-EEEeecccCCCceEEEEecCCCCCCcceEEEecCCcceEEee------ Confidence 9999999999999999999999999999995 589999999999999999999998 56999999988888877 Q ss_pred eccccccceEEEEEecCCceEEEEEe---------eeccCccceeeeeeeeccccchhHHHHHHHhhcCccceeEEeeec Q lcl|Aclame:pro 304 IFGGGVYNDIMRKVESKDGAVTVTIT---------KPESKRGMISEDPLVFKSGDYTNFKMLVDAINNHPFNNVVRARTK 374 (717) Q Consensus 304 ~~~G~~GN~i~I~v~~~~~~~t~~lt---------~~~~~~~~~~~~~~~l~~g~~~~~~~lv~~IN~~~~~~~~~a~~~ 374 (717) ..|+-+.|+|+...+.++.++. +..++.+......+.|+.|.+.+...++.+||..+. +++.+. T Consensus 149 ----~~g~v~~i~y~g~~~~a~~~i~~~~~~~~a~~l~~~~g~~~v~~~~l~~g~~~~~~~l~~~i~~~~~---~tAky~ 221 (562) T protein:vir:80 149 ----NLGSIFSIKYKGTEASATFTVAVDPVTFKATKLTLKAGDKTVKEYDLGSGAYAETNVLISDINNLPD---FEAKFF 221 (562) T ss_pred ----ccCceeeeeeccccccceeEEEecCccceEEEEEEecCCcceeEEEeCCCccchhhhhhhhhccccc---eEEEec Confidence 2245556666666555544442 223333445566788999999999999999986543 222222 Q ss_pred cccccccccc-c------ch------------------------------------hhhhhccCCccCcccchhhhhhhc Q lcl|Aclame:pro 375 PEFEATFTST-L------QA------------------------------------AADAKFSGGKDELSLDKEEMYKRL 411 (717) Q Consensus 375 ~~~~~~l~s~-~------~~------------------------------------~~~~~ltgG~dG~~~~a~e~~~al 411 (717) +.....+... . .. .....|+||.||+ T Consensus 222 g~~~n~i~~~~~d~~~~~~~kt~~~~v~~~~~d~~~~~~~n~~v~~~~~~~~~la~~~~~~LtGG~dG~----------- 290 (562) T protein:vir:80 222 PIGDKNLTTDNFDAQIDVDIKTKEAYVKAVGGDIEKQTAYNGYVEFEFDRSKEIANFPLTKLTGGDNGT----------- 290 (562) T ss_pred ccCCceeeecccccchhhhcccceeeeeehhhhhhhcccccceEEEEeccCccccccceeeeeCCCCCC----------- Confidence 1111111000 0 00 0012333333332 Q ss_pred ccccccccchhhhhhhhccccccceeEEeccccCCcccccccchhHHHHHHHHHHHhhcccceeEEecCCCcchhhHHHH Q lcl|Aclame:pro 412 GGEKNEEGFVTKQGAYQYLENYEVDYVIPLGVHADTKLIGKYDDFAYQLALACAVMSHYNSVTIGIIPTTTPSDISLAGV 491 (717) Q Consensus 412 ~~~~~~~~~v~~~~~~~~le~~~vd~vi~~~~~a~t~~~~~~~~~~~~~a~~~~~~s~~~~~~i~ii~~~~~~~~~~a~v 491 (717) ....++..++.+++++++.+++.. ....++..+..||+.++..++.++.+++..+..+. T Consensus 291 -------~~~~~~dal~~Le~~~~~~i~~~t---------~d~ai~~~~~a~vkr~r~~g~~~~aVvg~~~~~~~----- 349 (562) T protein:vir:80 291 -------IPESWADKFSYFANEGGYYLVPLT---------SKQAVHAEALQFVRDCSYNGNPMRVFVGGGIGESM----- 349 (562) T ss_pred -------ccccHHHHHHHHHhCCcEEEEecC---------CChHHHHHHHHHHHHHHhCCCeEEEEecCCCCCCH----- Confidence 122234445566666666554431 01124566778888888777777777776554332 Q ss_pred HHHHHHHHhhhhhhhhcccccccccchhhhhccccceeEEEeCcEEEEecccCcceeech---hHHHHHHHhcCCccccc Q lcl|Aclame:pro 492 EEHVKKLENYANEFYMRDRFGNIIFDADRNKIDLGQFIEVVAGPDFIVRNTRLGQMASTP---DASYIGMVSQLKTQSAP 568 (717) Q Consensus 492 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~v~~p~~~v~~~~~~~~~~~p~---ag~vAGl~A~~gv~~Sp 568 (717) ++...+...+. +.++..+.++..+.... ......|| ++++||++|++++++|| T Consensus 350 ~~~~~~a~~~n-----------------------~e~vv~v~~~~~~~~~~-~~~~~~~~~~~aa~vAGl~Ag~~~~~S~ 405 (562) T protein:vir:80 350 EQLFTRAIGLQ-----------------------NERAGLIGFSGTVKMDD-GRSLKMPGYMFAAQVAGLTCGLEIGEAI 405 (562) T ss_pred HHHHHHhhhcC-----------------------CCeEEEEecCeeEECCC-CceeeechhHHHHHHHHHHhcCccccCc Confidence 11111111111 12233445554443332 23334444 88999999999999999 Q ss_pred CCceecccccccccCCHHHHHHHHhCCcEEEEEEcCceEEEE---eceecC--CCCccceeeehhhhHHHHHHHHHHHH- Q lcl|Aclame:pro 569 TNKPLPSVTALRYTYSANQLNRLTKARFATFKYKQDGSIGVV---DAPTSA--HAGSDYTRLSTARIVKEAVNAVREVA- 642 (717) Q Consensus 569 aNk~L~gv~~l~~~lt~~e~d~L~~~GI~~ir~~~g~G~~v~---g~rTt~--s~ds~~~~I~vrR~~d~I~~~I~~~~- 642 (717) +|+++++ .++..+|++.|+++|+++|+++++..++++.++| .+.|+. .+++.|++|+++|++|+|.++|++.+ T Consensus 406 T~~~i~~-~~v~~~lt~~e~~~li~~G~l~l~~~~~~~v~~~riv~~itT~t~~~~~~~~ki~viRv~D~i~~dir~~~~ 484 (562) T protein:vir:80 406 TFKNIAI-ETLDTIYEGSQLDQLNESGIITAEFVRNRAVTNFRIVDDVTTFNDKTDPVKSEIGVGEANDFLVSELKISLD 484 (562) T ss_pred cceeecc-ccccccCCHHHHHHHHhCCeEEEEEecCCcEEEEEeeccceeccCCCCchhhhhhhhHHHHHHHHHHHHHHH Confidence 9999985 6899999999999999999999998887765554 566654 45788999999999999999999887 Q ss_pred HHhccccCCHHHHHHHHHHHHHHHHHHHhCCceecceeeeecChhhhhCCEEEEEEEEEccccccEEEEEEEEeC Q lcl|Aclame:pro 643 DPFIGEPNDTGNRNALTAAVDKRLSKMIENKALLGFDFRLVVTPQQELLGEGSIELSLEAPNELRRLTTIVSLSA 717 (717) Q Consensus 643 ~~~IgepN~~~~~~~i~~~I~~fL~~L~~~GaI~G~~~~~~~t~~~i~~G~l~v~i~v~P~~p~e~I~v~i~~ta 717 (717) +|||||||++.+|..|+..|..||++|++.|+|.||++++. +.....+++++++.++|++|||||++++++.. T Consensus 485 ~~yIGk~Nn~~~r~~v~~~i~~~L~~l~~~gaI~~~~~~dv--~v~~~~d~~~v~~~v~Pv~~mekIy~ti~~~~ 557 (562) T protein:vir:80 485 NEYIGTKIIDTSASLVKNFVQSFLDRKKLAKEIQDYSPEEV--QVVIEGDIARISLTVFPIRSMKKIEVSLVYRQ 557 (562) T ss_pred hcCCccccChHHHHHHHHHHHHHHHHHHhCCcccCCCccce--EEEecCCEEEEEEEEEEcccceEEEEEEEEEe Confidence 69999999999999999999999999999999999987532 12245678999999999999999999999887 No 18 >protein:vir:63742 Length: 562 # NCBI annotation: Tsh # Family: family:all:2449 # MgeID: mge:1517 # MgeName: P100 # Cross-refs: genbank:gi:82547629;genbank:GeneID:3783475 Probab=100.00 E-value=2.5e-74 Score=424.07 Aligned_cols=511 Identities=15% Similarity=0.147 Sum_probs=352.2 Q ss_pred eEE-EeecceeecCcee-EeccccceeeccccccchhheeecCCcccccccceeehhhhhhhhheeeeeeeEeecccccc Q lcl|Aclame:pro 147 TFL-LKARGVIIPPNNY-TLDVGTEEDMKAGTQPTFAQVLLNENVADMESEITVSYEFTYKDAQGETKTSEVLDNNTDKD 224 (717) Q Consensus 147 ~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~gelld~~ie~~ 224 (717) .-+ +|.+-...+|..| ..+++.+.-+.+. ...+.+..|.+..|.+.++...++++||+..|++|+|+++ |+++ T Consensus 1 ~~~~~~~~~~~~~Pgv~~~~~~s~~~~~~~~----~~~~~~~iG~a~~G~~~~~~~~~~~~~~~~~fg~g~l~~~-i~~a 75 (562) T protein:vir:63 1 MAIEIYPRKPVSRPHTEISVDTSGIGGSSSG----SEKILCLVGSATGGKPNAVYKVRNYSQAKSVFRSGELLDA-IERA 75 (562) T ss_pred CeeeeeCCCcccCCceEEEEecCCCcccCCC----CCceEEEEEEeCCCCCceeEEEccHHHHHHHhcCCchHHH-HHHh Confidence 222 5655557778888 6666665444444 4445555599999999999999999999999999999998 9999 Q ss_pred cccCcccCCceEEEEEeeccccceeeecCccccccchheeccceeEEEEecCcccc-ceEEEEeecccccccccceEEEe Q lcl|Aclame:pro 225 GKPMIAKGADVTIKLEHVALAGLKLYADGIEVVDAKAFTVAGDQLTIHSNSKMKLG-ASLEAQYAYNLVEVIQPVIELES 303 (717) Q Consensus 225 ~~p~~~~~ag~i~a~r~~~a~~a~~~~~g~~~~~s~~~g~~an~i~v~l~d~~~t~-~~l~v~~a~~~~~~~~d~i~l~a 303 (717) |+|+...|+|.+|+|||+++++|+++++|++ |+|+.||+.+|+||++|++++.++ +++++.|.++.+..+++ +| T Consensus 76 ~~~~~~~g~~~~~~~rv~~a~~a~~~~~~~~-~~a~~~g~~~n~i~v~~~~~~~~~~~~~~v~~~~~~~~ev~~--~~-- 150 (562) T protein:vir:63 76 WNPGEGTGAGDILAMRVEEAKEATFEAEGVK-VSSTIYGADANDIQVALEDNTITGTKRLSIVFAKERVNQVYD--NL-- 150 (562) T ss_pred ccccccCCceEEEEEEcCCCccceeEeccee-EEEeecccCCCeEEEEEecCCCCCCcceEEEecCCCcchhhh--hc-- Confidence 9999999999999999999999999999995 589999999999999999999998 57999999998888877 22 Q ss_pred eccccccceEEEEEecCCceEEEEE---------eeeccCccceeeeeeeeccccchhHHHHHHHhhcCccceeEEeeec Q lcl|Aclame:pro 304 IFGGGVYNDIMRKVESKDGAVTVTI---------TKPESKRGMISEDPLVFKSGDYTNFKMLVDAINNHPFNNVVRARTK 374 (717) Q Consensus 304 ~~~G~~GN~i~I~v~~~~~~~t~~l---------t~~~~~~~~~~~~~~~l~~g~~~~~~~lv~~IN~~~~~~~~~a~~~ 374 (717) |+-+.|+|++..+..+.++ .+..++.+......+.|+.|.+.....++.+||..+. +++.+. T Consensus 151 ------g~V~~i~y~g~~~~~~~~v~~~~~~~~a~~l~~~~g~~~v~~~~L~~g~~~~~~~l~~~in~~~~---~~aky~ 221 (562) T protein:vir:63 151 ------GSIFSIKYKGTEASATFTVAVDPVTFKATKLTLKAGDKTVKEYDLGSGAYAETNVLISDINNLPD---FEAKFF 221 (562) T ss_pred ------cceeeeeeecccccceEEEEecCcceeEEEEEeecCCcceeEEEecCCccchhHHHHHhhccccc---eEEEee Confidence 3334455555544443333 1223344445566788999999999999999997543 223222 Q ss_pred cccccccccc-------cchhhh------------------hhccCCccCcccchhhhhhhcccccccccchhhhhhhhc Q lcl|Aclame:pro 375 PEFEATFTST-------LQAAAD------------------AKFSGGKDELSLDKEEMYKRLGGEKNEEGFVTKQGAYQY 429 (717) Q Consensus 375 ~~~~~~l~s~-------~~~~~~------------------~~ltgG~dG~~~~a~e~~~al~~~~~~~~~v~~~~~~~~ 429 (717) +.....+... ...... .......++....++-....|.+-.+......++..++. T Consensus 222 ~~~gn~i~~~~~d~~~~~~vkt~~~~v~t~~~d~~~~~~~~~~v~~~~~~~~~la~~~~~~LtGG~dGt~~~~~~~al~a 301 (562) T protein:vir:63 222 PIGDKNLTTDNFDAQIDVDIKTKEAYVKAVGGDIEKQTAYNGYVDFEFDRSKEIANFPLTKLTGGDNGTIPESWADKFSY 301 (562) T ss_pred ccCCceeeeeccccccccchhhhhhhhhhhhhhhhhcccccceeeeeeccccceecccceeeecCCCCCchhhHHHHHHH Confidence 2211111100 000000 000000000000000011112111222122223344455 Q ss_pred cccccceeEEeccccCCcccccccchhHHHHHHHHHHHhhcccceeEEecCCCcchhhHHHHHHHHHHHHhhhhhhhhcc Q lcl|Aclame:pro 430 LENYEVDYVIPLGVHADTKLIGKYDDFAYQLALACAVMSHYNSVTIGIIPTTTPSDISLAGVEEHVKKLENYANEFYMRD 509 (717) Q Consensus 430 le~~~vd~vi~~~~~a~t~~~~~~~~~~~~~a~~~~~~s~~~~~~i~ii~~~~~~~~~~a~v~~~~~~~~~~~~~~~~~d 509 (717) ++.++++.+++.. ....++..+..||+.++..++.++.+++..+..+. ++...+... T Consensus 302 le~~~~~~i~~~t---------~d~av~~~l~a~vkr~~~~g~~~~aVlg~~~~~~~-----~~~~~~a~~--------- 358 (562) T protein:vir:63 302 FANEGGYYLVPLT---------SKQAVHAEALQFVRDCSYNGNPMRVFVGGGIGESM-----EQLFTRAIG--------- 358 (562) T ss_pred HHhCCcEEEEecC---------CCHHHHHHHHHHHHHHHhCCCcEEEEecCCCCCCH-----HHHHHHhhh--------- Confidence 5666665554421 01123455667777776666666666665443321 111111101 Q ss_pred cccccccchhhhhccccceeEEEeCcEEEEecccCcceeech---hHHHHHHHhcCCcccccCCceecccccccccCCHH Q lcl|Aclame:pro 510 RFGNIIFDADRNKIDLGQFIEVVAGPDFIVRNTRLGQMASTP---DASYIGMVSQLKTQSAPTNKPLPSVTALRYTYSAN 586 (717) Q Consensus 510 ~~~~~~~~~~~~~~~~~~~~~v~~p~~~v~~~~~~~~~~~p~---ag~vAGl~A~~gv~~SpaNk~L~gv~~l~~~lt~~ 586 (717) ++ +.++..+.++....+. .......|+ ++++||++|++++++||+|++++ +.++..+|++. T Consensus 359 -------------~n-~ervv~v~~~~~~~~~-~~~~~~~~~~~~aa~vAGl~A~~~~~~SlT~~~i~-~~~v~~~~t~~ 422 (562) T protein:vir:63 359 -------------LQ-NERAGLIGFSGTVKMD-DGRSLKMPGYMFAAQVAGLTCGLEIGEAITFKNIA-IETLDTIYEGS 422 (562) T ss_pred -------------cC-CCcEEEEecCeeEECC-CCceeeechhHHHHHHHHHhhcCchhcCccceeec-cccccccCCHH Confidence 11 1233344555443333 333444555 78999999999999999999997 77999999999 Q ss_pred HHHHHHhCCcEEEEEEcCceEEEE---eceecC--CCCccceeeehhhhHHHHHHHHHHHH-HHhccccCCHHHHHHHHH Q lcl|Aclame:pro 587 QLNRLTKARFATFKYKQDGSIGVV---DAPTSA--HAGSDYTRLSTARIVKEAVNAVREVA-DPFIGEPNDTGNRNALTA 660 (717) Q Consensus 587 e~d~L~~~GI~~ir~~~g~G~~v~---g~rTt~--s~ds~~~~I~vrR~~d~I~~~I~~~~-~~~IgepN~~~~~~~i~~ 660 (717) |+++|+++|+++|+..++++.++| .+.|+. .+++.|++|+++|++|+|.++|++.+ +||||+||+..+|..|+. T Consensus 423 e~~~li~~Gv~~l~~~~~~~v~~~~iv~~itT~t~~~~~~~~ki~viRv~D~i~~dir~~~~~~yiGk~Nn~~~r~~v~~ 502 (562) T protein:vir:63 423 QLDQLNESGIITAEFVRNRAVTNFRIVDDVTTFNDKTDPVKSEIGVGEANDFLVSELKISLDNEYIGTKIIDTSASLVKN 502 (562) T ss_pred HHHHHHhCCeEEEEEecCCcEEEEEeeccceecCCCCCchhhhhhhhHHHHHHHHHHHHHHHhcCCccccChHHHHHHHH Confidence 999999999999998888766555 455553 45778999999999999999999876 599999999999999999 Q ss_pred HHHHHHHHHHhCCceecceeeeecChhhhhCCEEEEEEEEEccccccEEEEEEEEeC Q lcl|Aclame:pro 661 AVDKRLSKMIENKALLGFDFRLVVTPQQELLGEGSIELSLEAPNELRRLTTIVSLSA 717 (717) Q Consensus 661 ~I~~fL~~L~~~GaI~G~~~~~~~t~~~i~~G~l~v~i~v~P~~p~e~I~v~i~~ta 717 (717) .|.+||++|++.|+|+||++++. +.....+++++++.++|++|||||++++++.. T Consensus 503 ~i~~~L~~l~~~gaI~~~~~~dv--~v~~~~d~~~v~~~v~pv~~mekIy~ti~~~~ 557 (562) T protein:vir:63 503 FVQSFLDRKKLAKEIQDYSPEEV--QVVIEGDVARISLTVFPIRSMKKIEVSLVYRQ 557 (562) T ss_pred HHHHHHHHHHhCCcccCCCccce--EEEecCCEEEEEEEEEEcccceEEEEEEEEee Confidence 99999999999999999987532 12245678999999999999999999999887 No 19 >protein:vir:80779 Length: 569 # NCBI annotation: putative tail sheath protein # Family: family:all:2449 # MgeID: mge:1885 # MgeName: phiEF24C # Cross-refs: genbank:acc:YP_001504132;genbank:gi:158079319;genbank:GeneID:5666428 Probab=100.00 E-value=2.9e-72 Score=412.79 Aligned_cols=497 Identities=13% Similarity=0.109 Sum_probs=357.4 Q ss_pred ccceeeccCCcceeeeEEEeecceeecCcee-EeccccceeeccccccchhheeecCCcccccccceeehhhhhhhhhee Q lcl|Aclame:pro 132 VAATFTLPNGGIVEATFLLKARGVIIPPNNY-TLDVGTEEDMKAGTQPTFAQVLLNENVADMESEITVSYEFTYKDAQGE 210 (717) Q Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~ 210 (717) .| .+ +|-+-.++.|..| ..+++.+.-+... +..+.+..|++..|.+.++....+++|||+. T Consensus 1 ~~-------------~~-~~~~~~~~~Pgv~~~~~~~~~~~~~~~----~~~~~~~ig~a~~G~~~~~~~~~~~~~~~~~ 62 (569) T protein:vir:80 1 MA-------------VE-QFPRKKVSRPHTEITVDTSGIGGSSSS----SDKTLMLVGSAKGGKPDTVYRFRNYQQAKQV 62 (569) T ss_pred Ce-------------ee-eecCCccccCceEEEEecCCCcCCCCC----CceeEEEEEEeCCCCCceeEEecCHHHHHHH Confidence 11 11 2433446666677 7777765444444 4445555599999999999999999999999 Q ss_pred eeeeeEeecccccccccCc--ccCCceEEEEEeeccccceeeecCccccccchheeccceeEEEEecCcccc-ceEEEEe Q lcl|Aclame:pro 211 TKTSEVLDNNTDKDGKPMI--AKGADVTIKLEHVALAGLKLYADGIEVVDAKAFTVAGDQLTIHSNSKMKLG-ASLEAQY 287 (717) Q Consensus 211 ~~~gelld~~ie~~~~p~~--~~~ag~i~a~r~~~a~~a~~~~~g~~~~~s~~~g~~an~i~v~l~d~~~t~-~~l~v~~ 287 (717) |++|+|+++ |+++|+|+. ..++|.+++||++++++++++.+|+ .++++.||..+|+||++|++++.++ +++++.| T Consensus 63 f~~g~l~~a-~~~a~~~~~~~~~~~~~~~~~rv~~a~~a~~~~~~~-~~~a~~~g~~~n~i~v~l~~~~~~~~~~~~v~~ 140 (569) T protein:vir:80 63 LRSGDLLDA-IELAWNASDVNTASAGDILAVRVEDAKNATLTKGGL-TFASTIYGVDANEIQVALEDNNLTHTKRLTVAF 140 (569) T ss_pred hcCCchhHH-HHhhccCccccccCceEEEEEEcCCCeeeeeeccce-eeeeeeccCCCceEEEEEecCcCCcceeeEEee Confidence 999999998 999999975 4678999999999999999999999 5789999999999999999999998 7899999 Q ss_pred ecccccccccceEEEeeccccccceEEEEEecCCceEEEEEee---------eccC-----ccceeeeeeeeccccchhH Q lcl|Aclame:pro 288 AYNLVEVIQPVIELESIFGGGVYNDIMRKVESKDGAVTVTITK---------PESK-----RGMISEDPLVFKSGDYTNF 353 (717) Q Consensus 288 a~~~~~~~~d~i~l~a~~~G~~GN~i~I~v~~~~~~~t~~lt~---------~~~~-----~~~~~~~~~~l~~g~~~~~ 353 (717) .++.++..++.| |+-+.|+|++..+.+++++.. ...+ +..+....++++.+.+.++ T Consensus 141 ~~~~~~~~~~~i----------g~v~si~ytg~~~~a~~~~~~~~~~~~a~~l~~~~g~~~~~~~~v~~~~~~~~~~~~~ 210 (569) T protein:vir:80 141 SKDGYKKVFDNL----------GKIFSIQYKGSEAQANFTIAQDSISKKATTLTLNVGSEPESTTEVMKYELGQGVYSET 210 (569) T ss_pred ecCCCccccccc----------cceeeEEEeeccccceEEeecCcCcceeEEEEEEecCCcceeEEEEeeccCCccchhh Confidence 998888887732 444556666555554443321 1111 2234456678888899999 Q ss_pred HHHHHHhhcCccceeEEeeecc---------cccc----c----ccc---c--------------------cchhhhhhc Q lcl|Aclame:pro 354 KMLVDAINNHPFNNVVRARTKP---------EFEA----T----FTS---T--------------------LQAAADAKF 393 (717) Q Consensus 354 ~~lv~~IN~~~~~~~~~a~~~~---------~~~~----~----l~s---~--------------------~~~~~~~~l 393 (717) ..++++||..+.+.+....... +... + .+. . ........| T Consensus 211 ~~lv~~~~~~~~f~a~~~~~~~~~~~~~~~d~~~~~~~~t~~~~~~~~~~di~~~~~~~~~v~~~~~~~~~l~~~~~~~L 290 (569) T protein:vir:80 211 NVLVSAINSLPDWEAKFFPIGDKNLPTDALEAVTKVDVKTEAVFVGALAGDIAKQLEYNDYVTVAVDATKPVEDFELTNL 290 (569) T ss_pred hhhhhhcCCccCceEEEEecCCCcceehhccchhheeccccceeeehhHHHHHHhhcCCceEEEEecCCcceeeecceee Confidence 9999999987655443221100 0000 0 000 0 000001123 Q ss_pred cCCccCcccchhhhhhhcccccccccchhhhhhhhccccccceeEEeccccCCcccccccchhHHHHHHHHHHHhhcccc Q lcl|Aclame:pro 394 SGGKDELSLDKEEMYKRLGGEKNEEGFVTKQGAYQYLENYEVDYVIPLGVHADTKLIGKYDDFAYQLALACAVMSHYNSV 473 (717) Q Consensus 394 tgG~dG~~~~a~e~~~al~~~~~~~~~v~~~~~~~~le~~~vd~vi~~~~~a~t~~~~~~~~~~~~~a~~~~~~s~~~~~ 473 (717) +||.||+ ....++..++.+++++++.+++... ...++..+..||+.++..++. T Consensus 291 tGG~dG~------------------~~~~~~~~l~~le~~~~~~i~~~t~---------d~av~~~l~a~vkr~r~~g~~ 343 (569) T protein:vir:80 291 TGGSDGT------------------APESWANKFPLLANEGGYYLVPLTD---------KQAVHSEALAFVKDRTDNGDP 343 (569) T ss_pred cCCCCCC------------------ccchHHHHHHHHhhCCcEEEEecCC---------ChHHHHHHHHHHHHHHhCCCc Confidence 3444332 2223444566677777777655311 123567788899888887778 Q ss_pred eeEEecCCCcchhhHHHHHHHHHHHHhhhhhhhhcccccccccchhhhhccccceeEEEeCcEEEEecccCcceeech-- Q lcl|Aclame:pro 474 TIGIIPTTTPSDISLAGVEEHVKKLENYANEFYMRDRFGNIIFDADRNKIDLGQFIEVVAGPDFIVRNTRLGQMASTP-- 551 (717) Q Consensus 474 ~i~ii~~~~~~~~~~a~v~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~v~~p~~~v~~~~~~~~~~~p~-- 551 (717) ++.+++..+..+. ++...+...+. +.++..++++..+++..... ...|+ T Consensus 344 ~~aVvg~~~~~~~-----~~~~~~a~~~n-----------------------~e~vv~v~~~~~~~~~~g~~-~~~~~~~ 394 (569) T protein:vir:80 344 MRIIVGGGTNETV-----EESITRATNLR-----------------------DPRASLVGFSGTRKMDDGRL-LKLPGYM 394 (569) T ss_pred EEEEecCCCCCCH-----HHHHHHHhhcC-----------------------CCeEEEEecCceeecCCCcc-eeechhh Confidence 8888876554331 21111111111 22355566666555432222 23333 Q ss_pred -hHHHHHHHhcCCcccccCCceecccccccccCCHHHHHHHHhCCcEEEEEEcCceEEEE---eceecC--CCCccceee Q lcl|Aclame:pro 552 -DASYIGMVSQLKTQSAPTNKPLPSVTALRYTYSANQLNRLTKARFATFKYKQDGSIGVV---DAPTSA--HAGSDYTRL 625 (717) Q Consensus 552 -ag~vAGl~A~~gv~~SpaNk~L~gv~~l~~~lt~~e~d~L~~~GI~~ir~~~g~G~~v~---g~rTt~--s~ds~~~~I 625 (717) ++++||++|++++++||+|++++ +.++.++|+++|++.|+++|+++|++.+++..++| .+.|+. ..++.|++| T Consensus 395 ~aa~vAG~~A~~~~~~S~T~k~i~-~~~i~~~lt~~e~~~li~~G~~~l~~~~~~~~~v~~~vn~itT~t~~~~~~~~~i 473 (569) T protein:vir:80 395 MASQIAGIASGLEVGEAITFKHFN-VTSVDRVFESSQLDMLNESGVISIEFVRNRTLTAFRVVQDVTTYNDKSDPVKNEM 473 (569) T ss_pred HHHHHHHHHhcCccccCccceeec-cccccccCCHHHHHHHHhCCeEEEEEecCceEEEEEEeccceecCCCCCchhhhh Confidence 78999999999999999999997 67999999999999999999999998888766555 456653 456779999 Q ss_pred ehhhhHHHHHHHHHHHH-HHhccccCCHHHHHHHHHHHHHHHHHHHhCCceecceeeeecChhhhhCCEEEEEEEEEccc Q lcl|Aclame:pro 626 STARIVKEAVNAVREVA-DPFIGEPNDTGNRNALTAAVDKRLSKMIENKALLGFDFRLVVTPQQELLGEGSIELSLEAPN 704 (717) Q Consensus 626 ~vrR~~d~I~~~I~~~~-~~~IgepN~~~~~~~i~~~I~~fL~~L~~~GaI~G~~~~~~~t~~~i~~G~l~v~i~v~P~~ 704 (717) +++|++|+|.++|++.+ +||||+||+..+|..|+..|++||++||++|+|.||++++. +..+..+++++++.++|++ T Consensus 474 ~viRv~D~i~~dir~~~~~~yiGk~nn~~~r~~v~~~i~~~L~~l~~~gaI~~~~~~dv--~v~~~~d~~~v~~~v~Pv~ 551 (569) T protein:vir:80 474 SVGEANDFLVSELKIELDNNFIGTKVIDTSASLIKNFIQSFLDNKKRAREIQDYTPEEV--QVVLEGDVASISMTVMPIR 551 (569) T ss_pred hhhHHHHHHHHHHHHHHHhhcCcccCChhHHHHHHHHHHHHHHHHHhCCcccCCCccce--EEEecCCEEEEEEEEEEcc Confidence 99999999999999876 68999999999999999999999999999999999986532 2235567899999999999 Q ss_pred cccEEEEEEEEeC Q lcl|Aclame:pro 705 ELRRLTTIVSLSA 717 (717) Q Consensus 705 p~e~I~v~i~~ta 717 (717) |||||++|+++.. T Consensus 552 ~~ekI~~ti~~~~ 564 (569) T protein:vir:80 552 SLNKITVQLVYKQ 564 (569) T ss_pred cccEEEEEEEEee Confidence 9999999999887 No 20 >protein:vir:99306 Length: 587 # NCBI annotation: putative major tail sheath protein # Family: family:all:2449 # MgeID: mge:1655 # MgeName: K # Cross-refs: genbank:acc:YP_024479;genbank:gi:48696438;genbank:GeneID:2948034 Probab=100.00 E-value=1.9e-72 Score=413.79 Aligned_cols=512 Identities=14% Similarity=0.127 Sum_probs=354.3 Q ss_pred ccceeeccCCcceeeeEEEeecceeecCcee-EeccccceeeccccccchhheeecCCcccccccceeehhhhhhhhhee Q lcl|Aclame:pro 132 VAATFTLPNGGIVEATFLLKARGVIIPPNNY-TLDVGTEEDMKAGTQPTFAQVLLNENVADMESEITVSYEFTYKDAQGE 210 (717) Q Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~ 210 (717) .| .. .|-+-.+..|..| ..|++.+.-+..+. ....+..+++..|.+.++..-++++|||+. T Consensus 1 ~a-------~~-------~~~~~~~~~pgv~~~~~~~~~~~~~~~~----~~~~~~~g~a~~G~~~~~~~~~~~~~~~~~ 62 (587) T protein:vir:99 1 MA-------VE-------PFPRRPITRPHASIEVDTSGIGGSAGSS----EKVFCLIGQAEGGEPNTVYELRNYSQAKRL 62 (587) T ss_pred Cc-------cc-------ccCCcccccCceEEEEecCCccccCCCC----CceEEEEEEecCCccceeEEeccHHHHHHH Confidence 11 11 1333346677777 66666654444444 445555599999999999999999999999 Q ss_pred eeeeeEeecccccccccCcccCCceEEEEEeeccccceeeecCccccccchheeccceeEEEEecCcccc-ceEEEEeec Q lcl|Aclame:pro 211 TKTSEVLDNNTDKDGKPMIAKGADVTIKLEHVALAGLKLYADGIEVVDAKAFTVAGDQLTIHSNSKMKLG-ASLEAQYAY 289 (717) Q Consensus 211 ~~~gelld~~ie~~~~p~~~~~ag~i~a~r~~~a~~a~~~~~g~~~~~s~~~g~~an~i~v~l~d~~~t~-~~l~v~~a~ 289 (717) |+||||+++ |+++|+|+..+|+|.++||||+++++|+++++|+ +|+|+.||..+|.|||+++++.+++ ++|++.|.+ T Consensus 63 ~~~g~l~~~-~~~a~~~~~~~g~~~~~~~rv~~~~~a~~~~~~l-~~~a~~~G~~gN~i~v~~~~~~~~~~~~~~~~~~~ 140 (587) T protein:vir:99 63 FRSGELLDA-IELAWGSNPNYTAGRILAMRIEDAKPASAEIGGL-KITSKIYGNVANNIQVGLEKNTLSDSLRLRVIFQD 140 (587) T ss_pred hcCcchHHH-HHHHhccccCCCceEEEEEEcCCCceeEEEecCe-EEEEeeccccccceEEEEccCCCCcceeEEEEEec Confidence 999999998 9999999999999999999999999999999999 5789999999999999999999998 589999999 Q ss_pred ccccccccceEEEeeccccccceEEEEEecCCceEEEEE---------eeeccCccceeeeeeeeccccchhHHHHHHHh Q lcl|Aclame:pro 290 NLVEVIQPVIELESIFGGGVYNDIMRKVESKDGAVTVTI---------TKPESKRGMISEDPLVFKSGDYTNFKMLVDAI 360 (717) Q Consensus 290 ~~~~~~~d~i~l~a~~~G~~GN~i~I~v~~~~~~~t~~l---------t~~~~~~~~~~~~~~~l~~g~~~~~~~lv~~I 360 (717) ++...+++.+ |+-+.|++++.+..+++++ .+..++.+..++..|.|+.|.+.+...++++| T Consensus 141 ~~~~~~~~~~----------g~v~~i~y~g~~~~a~~~v~~~~~t~~a~~~~l~~g~~~v~~yrL~~g~~~~~~~~~~~i 210 (587) T protein:vir:99 141 DRFNEVYDNI----------GNIFTIKYKGEEANATFSVEHDEETQKASRLVLKVGDQEVKSYDLTGGAYDYTNAIITDI 210 (587) T ss_pred ccceeeeeec----------cceeeEEeecccccceeeEeecCcceeeeeeeeecCCceeEEEEecCCchHHHHHHHhhh Confidence 8888777722 4556677777766655444 44556666677788999999999999999999 Q ss_pred hcCccceeEEeeecccccccccc-------ccchhh----------------------hhhccCCccCccc--------- Q lcl|Aclame:pro 361 NNHPFNNVVRARTKPEFEATFTS-------TLQAAA----------------------DAKFSGGKDELSL--------- 402 (717) Q Consensus 361 N~~~~~~~~~a~~~~~~~~~l~s-------~~~~~~----------------------~~~ltgG~dG~~~--------- 402 (717) |..+.. +|...+.++..+.+ ...+.. ......|...... T Consensus 211 ~~~~~~---tAky~~~~~~~i~~~~~~~~~~~~v~~~~~~v~a~~~D~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 287 (587) T protein:vir:99 211 NQLPDF---EAKLSPFGDKNLESSKLDKIENANIKDKAVYVKAVFGDLEKQTAYNGIVSFEQLNAEGEVPSNVEVEAGEE 287 (587) T ss_pred ccccce---eEEeeccCCceeEeecccccccceeeeeeeeeehhccceeeecccceeeeeeecccccchhhhhhhhhccc Confidence 975431 22222111110000 000000 0000000000000 Q ss_pred ------------chhhhhhhcccccccccchhhhhhhhccccccceeEEeccccCCcccccccchhHHHHHHHHHHHhhc Q lcl|Aclame:pro 403 ------------DKEEMYKRLGGEKNEEGFVTKQGAYQYLENYEVDYVIPLGVHADTKLIGKYDDFAYQLALACAVMSHY 470 (717) Q Consensus 403 ------------~a~e~~~al~~~~~~~~~v~~~~~~~~le~~~vd~vi~~~~~a~t~~~~~~~~~~~~~a~~~~~~s~~ 470 (717) .++-....|.+-.+......++..+..++.++++.+++.. ....++..+..||+.++.. T Consensus 288 ~~~~~~~~~~~~~a~~~~t~LtGG~dG~~~~sy~~al~ale~~~~~~i~~~t---------~d~~i~a~l~a~vk~~r~~ 358 (587) T protein:vir:99 288 SATVTATSPIKTIEPFELTKLKGGTNGEPPATWADKLDKFAHEGGYYIVPLS---------SKQSVHAEVASFVKERSDA 358 (587) T ss_pred cceeeeeccccceecccceeeecCCCCCccccHHHHHHHHhhCCcEEEEecC---------CCHHHHHHHHHHHHHHHhC Confidence 0000000121111111112234445556666666654421 1112455677777777766 Q ss_pred ccceeEEecCCCcchhhHHHHHHHHHHHHhhhhhhhhcccccccccchhhhhccccceeEEEeCcEEEEecccCcceeec Q lcl|Aclame:pro 471 NSVTIGIIPTTTPSDISLAGVEEHVKKLENYANEFYMRDRFGNIIFDADRNKIDLGQFIEVVAGPDFIVRNTRLGQMAST 550 (717) Q Consensus 471 ~~~~i~ii~~~~~~~~~~a~v~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~v~~p~~~v~~~~~~~~~~~p 550 (717) ++.++.+++..+..+. ++...+... ++. .++..+.++...... ......+| T Consensus 359 g~~~~aVlg~~~~~~~-----~~~~~~a~~----------------------~n~-e~vi~v~~~~~~~~~-dg~~~~~~ 409 (587) T protein:vir:99 359 GEPMRAIVGGGFNESK-----EQLFGRQAS----------------------LSN-PRVSLVANSGTFVMD-DGRKNHVP 409 (587) T ss_pred CCcEEEEecCCCCCCH-----HHHHHHhhh----------------------cCC-CcEEEEeccceEecC-CCceeeec Confidence 6667777765443321 111111000 111 112223333222111 11223455 Q ss_pred h---hHHHHHHHhcCCcccccCCceecccccccccCCHHHHHHHHhCCcEEEEEEcCc---eEEEEeceecC--CCCccc Q lcl|Aclame:pro 551 P---DASYIGMVSQLKTQSAPTNKPLPSVTALRYTYSANQLNRLTKARFATFKYKQDG---SIGVVDAPTSA--HAGSDY 622 (717) Q Consensus 551 ~---ag~vAGl~A~~gv~~SpaNk~L~gv~~l~~~lt~~e~d~L~~~GI~~ir~~~g~---G~~v~g~rTt~--s~ds~~ 622 (717) | ++++||++|++++++||+|+++. +.++..+|++.|++.|+++|+++|+..+++ ++++..+.|+. .++..| T Consensus 410 ~~~~aa~vAGl~Ag~~~~~SlT~~~i~-~~~v~~~~t~~e~e~li~~Gvl~l~~~~~~~~~~vriv~~ItT~t~~~~~~~ 488 (587) T protein:vir:99 410 AYMVAVALGGLASGLEIGESITFKPLR-VSSLDQIYESIDLDELNENGIISIEFVRNRTNTFFRIVDDVTTFNDKSDPVK 488 (587) T ss_pred hHHHHHHHHHHHhcCchhcCccceeee-cccccccCCHHHHHHHHhCCeEEEEEecCCcceEEEEeeceeeccCCCCchh Confidence 5 78999999999999999999997 678999999999999999999999887765 47888888874 456779 Q ss_pred eeeehhhhHHHHHHHHHHHH-HHhccccCCHHHHHHHHHHHHHHHHHHHhCCceecceeeeecChhhhhCCEEEEEEEEE Q lcl|Aclame:pro 623 TRLSTARIVKEAVNAVREVA-DPFIGEPNDTGNRNALTAAVDKRLSKMIENKALLGFDFRLVVTPQQELLGEGSIELSLE 701 (717) Q Consensus 623 ~~I~vrR~~d~I~~~I~~~~-~~~IgepN~~~~~~~i~~~I~~fL~~L~~~GaI~G~~~~~~~t~~~i~~G~l~v~i~v~ 701 (717) ++|+++|++|+|.++|++.+ ++|||+||++.+|..|+..|..||.+|++.|+|++|++++.. -+...++++|++.++ T Consensus 489 ~~i~viRv~D~i~~di~~~~~~~yiGk~Nn~~~r~~i~~~i~~~L~~l~~~gaI~~~~~~dv~--v~~~~d~~~v~~~v~ 566 (587) T protein:vir:99 489 AEMAVGEANDFLVSELKVQLEDQFIGTRTINTSASIIKDFIQSYLGRKKRDNEIQDFPAEDVQ--VIVEGNEARISMTVY 566 (587) T ss_pred hhhhhhhhHHHHHHHHHHHHHhhCCccccchHHHHHHHHHHHHHHHHHHhCCcccCCCccceE--EEecCCEEEEEEEEE Confidence 99999999999999999876 689999999999999999999999999999999999874321 123456899999999 Q ss_pred ccccccEEEEEEEEeC Q lcl|Aclame:pro 702 APNELRRLTTIVSLSA 717 (717) Q Consensus 702 P~~p~e~I~v~i~~ta 717 (717) |++|||||++++++.. T Consensus 567 Pv~~mekIy~tv~~~~ 582 (587) T protein:vir:99 567 PIRSFKKISVSLVYKQ 582 (587) T ss_pred EcccceEEEEEEEEEe Confidence 9999999999999977 No 21 >protein:vir:95741 Length: 587 # NCBI annotation: ORF011 # Family: family:all:2449 # MgeID: mge:1577 # MgeName: G1 # Cross-refs: genbank:acc:YP_240910;genbank:gi:66394960;genbank:GeneID:5132682 Probab=100.00 E-value=2.1e-71 Score=408.05 Aligned_cols=512 Identities=15% Similarity=0.132 Sum_probs=344.4 Q ss_pred ccceeeccCCcceeeeEEEeecceeecCcee-EeccccceeeccccccchhheeecCCcccccccceeehhhhhhhhhee Q lcl|Aclame:pro 132 VAATFTLPNGGIVEATFLLKARGVIIPPNNY-TLDVGTEEDMKAGTQPTFAQVLLNENVADMESEITVSYEFTYKDAQGE 210 (717) Q Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~ 210 (717) .| .. .|-+-.+..|..| ..+++.+..+.... ....+..|++..|.+.++..-++++|||.. T Consensus 1 ~a-------~~-------~~~~~~~~~pgv~~~~~~~~~~~~~~~~----~~~~~~~g~a~~G~~~~~~~~~~~~~~~~~ 62 (587) T protein:vir:95 1 MA-------VE-------PFPRRPITRPHASIEVDTSGIGGSAGSS----EKVFCLIGQAEGGEPNTVYELRNYSQAKRL 62 (587) T ss_pred Cc-------cc-------ccCCcccccCceEEEEecCCccccCCCC----CceEEEEEEeCCCCCceeEEeccHHHHHHH Confidence 11 11 1333346667777 66666554444444 445555699999999999999999999999 Q ss_pred eeeeeEeecccccccccCcccCCceEEEEEeeccccceeeecCccccccchheeccceeEEEEecCcccc-ceEEEEeec Q lcl|Aclame:pro 211 TKTSEVLDNNTDKDGKPMIAKGADVTIKLEHVALAGLKLYADGIEVVDAKAFTVAGDQLTIHSNSKMKLG-ASLEAQYAY 289 (717) Q Consensus 211 ~~~gelld~~ie~~~~p~~~~~ag~i~a~r~~~a~~a~~~~~g~~~~~s~~~g~~an~i~v~l~d~~~t~-~~l~v~~a~ 289 (717) |+||||+++ |+++|+|+..+|++.++||||+++++|+++++|+ +|+|+.||..+|.|||+++++.+++ ++|++.|.+ T Consensus 63 ~~~g~l~~~-~~~a~~~~~~~g~~~~~~~rv~~~~~a~~~~~~l-~~~a~~~G~~gN~i~v~~~~~~~~~~~~~~~~~~~ 140 (587) T protein:vir:95 63 FRSGELLDA-IELAWGSNPNYTAGRILAMRIEDAKPASAEIGGL-KITSKIYGNVANNIQVGLEKNTLSDSLRLRVIFQD 140 (587) T ss_pred hcCcchHHH-HHHHhccccCCCceEEEEEEcCCCceeEEEecCe-EEEEecccccccceEEEEecCCCCCceeEEEEEec Confidence 999999998 9999999999999999999999999999999999 5789999999999999999999998 689999998 Q ss_pred ccccccccceEEEeeccccccceEEEEEecCCceEEEE---------EeeeccCccceeeeeeeeccccchhHHHHHHHh Q lcl|Aclame:pro 290 NLVEVIQPVIELESIFGGGVYNDIMRKVESKDGAVTVT---------ITKPESKRGMISEDPLVFKSGDYTNFKMLVDAI 360 (717) Q Consensus 290 ~~~~~~~d~i~l~a~~~G~~GN~i~I~v~~~~~~~t~~---------lt~~~~~~~~~~~~~~~l~~g~~~~~~~lv~~I 360 (717) +....+|+.+ |+-+.|++++.+..++.+ ..+..++.+..++..|.|+.|.+.++..++.+| T Consensus 141 ~~~~~~~~~~----------g~v~si~y~g~~~~~~~~v~~~~~t~~a~~~~l~~g~~~v~~yrL~~g~~~~~~~~~~~i 210 (587) T protein:vir:95 141 DRFNEVYDNI----------GNIFTIKYKGEEANATFSVEHDEETQKASRLVLKVGDQEVKSYDLTGGAYDYTNAIITDI 210 (587) T ss_pred ccceeeeeec----------cceeeeeeeccccccceeeeecccceeeeeeeeecCCceEEEEEecCCchHHHHHHHHhh Confidence 8777777722 445567776665554433 344566666677788999999999999999999 Q ss_pred hcCccceeEEeeeccccccccccc-------cchhhh---hhccCCc-------------------cCccc--------- Q lcl|Aclame:pro 361 NNHPFNNVVRARTKPEFEATFTST-------LQAAAD---AKFSGGK-------------------DELSL--------- 402 (717) Q Consensus 361 N~~~~~~~~~a~~~~~~~~~l~s~-------~~~~~~---~~ltgG~-------------------dG~~~--------- 402 (717) |..+... |.....++..+... ..+.+. ..-..++ ..... T Consensus 211 n~~~~~t---Aky~g~~~~~i~~~~~~~~~~~~v~~~~~~v~a~~~d~~~~~~~~~~v~~~~~~g~~~~~~~~~~~~~~~ 287 (587) T protein:vir:95 211 NQLPDFE---AKLSPFGDKNLESSKLDKIENANIKDKAVYVKAVFGDLEKQTAYNGIVSFEQLNAEGEVPSNVEVEAGEE 287 (587) T ss_pred ccccceE---EEEecccCceeEEeecCcccccceehhhhhhhhhhcceeeeeeceeeeeeecccccceeccchhhhhccc Confidence 9866322 22111111000000 000000 0000000 00000 Q ss_pred ------------chhhhhhhcccccccccchhhhhhhhccccccceeEEeccccCCcccccccchhHHHHHHHHHHHhhc Q lcl|Aclame:pro 403 ------------DKEEMYKRLGGEKNEEGFVTKQGAYQYLENYEVDYVIPLGVHADTKLIGKYDDFAYQLALACAVMSHY 470 (717) Q Consensus 403 ------------~a~e~~~al~~~~~~~~~v~~~~~~~~le~~~vd~vi~~~~~a~t~~~~~~~~~~~~~a~~~~~~s~~ 470 (717) .++-....|.+-.+......++..+..++.++++.+++.. ....++..+..||+.++.. T Consensus 288 ~a~~~~~~~~~~~a~~~~t~LtGG~dG~~~~~y~~~l~ale~~~~~~i~~~t---------~d~~v~a~l~a~vk~~~~~ 358 (587) T protein:vir:95 288 SATVTATSPIKTIEPFELTKLKGGTNGEPPATWADKLDKFAHEGGYYIVPLS---------SKQSVHAEVASFVKERSDA 358 (587) T ss_pred chheeccccccceeccceeeeecCCCCCCcccHHHHHHHHHhCCcEEEEecC---------CCHHHHHHHHHHHHHHHhC Confidence 0000000111111111111223333444555555443320 0112334455566555555 Q ss_pred ccceeEEecCCCcchhhHHHHHHHHHHHHhhhhhhhhcccccccccchhhhhccccceeEEEeCcEEEEecccCcceeec Q lcl|Aclame:pro 471 NSVTIGIIPTTTPSDISLAGVEEHVKKLENYANEFYMRDRFGNIIFDADRNKIDLGQFIEVVAGPDFIVRNTRLGQMAST 550 (717) Q Consensus 471 ~~~~i~ii~~~~~~~~~~a~v~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~v~~p~~~v~~~~~~~~~~~p 550 (717) ++.++.+++..+..+. ++...+ ...++ +.++..++++..+. ........+| T Consensus 359 g~~~~aVvg~~~~~~~-----~~~~~~----------------------a~~~n-~ervi~v~~~~~~~-~~dg~~~~~~ 409 (587) T protein:vir:95 359 GEPMRAIVGGGFNESK-----EQLFGR----------------------QESLS-NPRVSLVANSGTFV-MDDGRKNHVP 409 (587) T ss_pred CCcEEEEEcCCCCCCH-----HHHHHH----------------------HhhcC-CCcEEEecccceEe-cCCCceeeec Confidence 5555555544332211 111000 00111 11222333332222 1112223455 Q ss_pred h---hHHHHHHHhcCCcccccCCceecccccccccCCHHHHHHHHhCCcEEEEEEcCc---eEEEEeceecC--CCCccc Q lcl|Aclame:pro 551 P---DASYIGMVSQLKTQSAPTNKPLPSVTALRYTYSANQLNRLTKARFATFKYKQDG---SIGVVDAPTSA--HAGSDY 622 (717) Q Consensus 551 ~---ag~vAGl~A~~gv~~SpaNk~L~gv~~l~~~lt~~e~d~L~~~GI~~ir~~~g~---G~~v~g~rTt~--s~ds~~ 622 (717) | ++++||++|++++++||+|+++. +.++.++|++.|++.|+++|+++|+..+++ ++++..+.|+. .+++.| T Consensus 410 ~~~~aa~vAGl~Ag~~~~~SlT~~~i~-~~~v~~~~t~~e~e~ai~~Gvl~l~~~~~~~~~~vriv~~itT~t~~~d~~~ 488 (587) T protein:vir:95 410 AYMVAVALGGLASGLEIGESITFKPLR-VSSLDQIYESIDLDELNENGIISIEFVRNRTNTFFRIVDDVTTFNDKSDPVK 488 (587) T ss_pred hHHHHHHHHHHHhcCchhcCccceeee-cccccccCCHHHHHHHHhCCeEEEEEecCCcceEEEEeecceeccCCCCcch Confidence 5 78999999999999999999997 678999999999999999999999887765 36777788874 456779 Q ss_pred eeeehhhhHHHHHHHHHHHH-HHhccccCCHHHHHHHHHHHHHHHHHHHhCCceecceeeeecChhhhhCCEEEEEEEEE Q lcl|Aclame:pro 623 TRLSTARIVKEAVNAVREVA-DPFIGEPNDTGNRNALTAAVDKRLSKMIENKALLGFDFRLVVTPQQELLGEGSIELSLE 701 (717) Q Consensus 623 ~~I~vrR~~d~I~~~I~~~~-~~~IgepN~~~~~~~i~~~I~~fL~~L~~~GaI~G~~~~~~~t~~~i~~G~l~v~i~v~ 701 (717) ++|+++|++|+|.++|++.+ +|||||||++.+|..|++.|..||++|++.|+|.+|++++.. -+...+++++++.++ T Consensus 489 ~~i~viRv~D~i~~dir~~~~~~~iGk~nn~~~r~~v~~~i~~~L~~l~~~gaI~~~~~~dv~--v~~~~d~~~v~~~v~ 566 (587) T protein:vir:95 489 AEMAVGEANDFLVSELKVQLEDQFIGTRTINTSASIIKDFIQSYLGRKKRDNEIQDFPAEDVQ--VIVEGNEARISMTVY 566 (587) T ss_pred hhhhhhhhHHHHHHHHHHHHHhhCCccccchHHHHHHHHHHHHHHHHHHhCCcccCCCccceE--EEecCCEEEEEEEEE Confidence 99999999999999999876 699999999999999999999999999999999999875321 123456899999999 Q ss_pred ccccccEEEEEEEEeC Q lcl|Aclame:pro 702 APNELRRLTTIVSLSA 717 (717) Q Consensus 702 P~~p~e~I~v~i~~ta 717 (717) |++|||||++++++.- T Consensus 567 Pv~~mekI~vt~~~~~ 582 (587) T protein:vir:95 567 PIRSFKKISVSLVYKQ 582 (587) T ss_pred EcccceEEEEEEEEee Confidence 9999999999999866 No 22 >protein:vir:96586 Length: 587 # NCBI annotation: ORF011 # Family: family:all:2449 # MgeID: mge:1623 # MgeName: Twort # Cross-refs: genbank:acc:YP_238553;genbank:gi:66391266;genbank:GeneID:5130368 Probab=100.00 E-value=1.1e-70 Score=404.09 Aligned_cols=494 Identities=15% Similarity=0.151 Sum_probs=351.1 Q ss_pred eEE-EeecceeecCcee-EeccccceeeccccccchhheeecCCcccccccceeehhhhhhhhheeeeeeeEeecccccc Q lcl|Aclame:pro 147 TFL-LKARGVIIPPNNY-TLDVGTEEDMKAGTQPTFAQVLLNENVADMESEITVSYEFTYKDAQGETKTSEVLDNNTDKD 224 (717) Q Consensus 147 ~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~gelld~~ie~~ 224 (717) .-+ +|-+....+|..| ..+++.+.-+...+. .+.+..|++..|.+.++..-++++|||+.|++|+|+++ |+++ T Consensus 1 ~~~~~~~~~~~~~Pgv~~~~~~~~~~~~~~~~~----~~~~~iG~a~~g~~~~~~~~~~~~~~~~~~g~G~l~~a-i~~a 75 (587) T protein:vir:96 1 MAKDIFPRRPIQRPHASIEVDSSGIGGSASNSE----KILCLIGKAEGGEPNTVYQVRNYAQAKSVFRSGELLDA-IELA 75 (587) T ss_pred CeeeeeCCCcccCCceEEEEecCCccCCCCCCC----ceEEEEEEecCCCCceeEEEcChHHHHHhhcCCcHHHH-HHHH Confidence 111 3555556777777 788877655544444 45555599999999999999999999999999999999 9999 Q ss_pred cccCcccCCceEEEEEeeccccceeeecCccccccchheeccceeEEEEecCcccc-ceEEEEeecccccccccceEEEe Q lcl|Aclame:pro 225 GKPMIAKGADVTIKLEHVALAGLKLYADGIEVVDAKAFTVAGDQLTIHSNSKMKLG-ASLEAQYAYNLVEVIQPVIELES 303 (717) Q Consensus 225 ~~p~~~~~ag~i~a~r~~~a~~a~~~~~g~~~~~s~~~g~~an~i~v~l~d~~~t~-~~l~v~~a~~~~~~~~d~i~l~a 303 (717) |+|+...|++.++||||++++++++++.|++ |+++.||+.+|+||++|++++..+ +++++.|.++.+..++| T Consensus 76 ~~~~~~~g~~~~~a~rv~~~~~a~~~~~~~~-~~~~~~g~~~n~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 148 (587) T protein:vir:96 76 WGSNPQYTAGKILAMRVEDAKASQLEKGGLR-VTSKIFGSVSNDIQVALEKNTITDSLRLRVVFQKDNYQEVFD------ 148 (587) T ss_pred hccCcCCCceEEEEEecCCCccceeeccccc-ccccccCCCCceEEEEEEeccCCCccceEEEEecCCceeecc------ Confidence 9999999999999999999999999999996 589999999999999999999998 68999999887777766 Q ss_pred eccccccceEEEEEecCCceEEEEEee---------eccCccceeeeeeeeccccchhHHHHHHHhhcCccceeEEeeec Q lcl|Aclame:pro 304 IFGGGVYNDIMRKVESKDGAVTVTITK---------PESKRGMISEDPLVFKSGDYTNFKMLVDAINNHPFNNVVRARTK 374 (717) Q Consensus 304 ~~~G~~GN~i~I~v~~~~~~~t~~lt~---------~~~~~~~~~~~~~~l~~g~~~~~~~lv~~IN~~~~~~~~~a~~~ 374 (717) .||+.+.|+++.+++.+..++.. ..++.+......|.+..|.+.+...++.++|..+. .++.+. T Consensus 149 ----n~G~v~~i~y~g~~~~a~~~~~~~~~~~~A~~l~l~gg~~~v~~yrl~~g~~~~~~~~~~~~~~~~~---~tAky~ 221 (587) T protein:vir:96 149 ----NLGNIFSINYKGEGEKATFSVEKDKETQEAKRLVLKVDEKEVKAYELNGGAYSFTNEIITDINELPD---FEAKLS 221 (587) T ss_pred ----ccCceEEEEecccccceeEeeccCcccceeeeeEEEecCceEEEEEeCCCchhhhhhhhhhhccccc---eEEEee Confidence 67788888888877766665532 22333344556788889999999999999987542 112111 Q ss_pred cccccccccc-------cchhh---------------------------------------------------------- Q lcl|Aclame:pro 375 PEFEATFTST-------LQAAA---------------------------------------------------------- 389 (717) Q Consensus 375 ~~~~~~l~s~-------~~~~~---------------------------------------------------------- 389 (717) ......++.. ....+ T Consensus 222 g~~~n~~~v~v~d~~~~~~~k~~~~y~~t~~~di~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 301 (587) T protein:vir:96 222 PFGDKNLESRKLDEATDVDIKGKAVYVKAVFGDIENQTQYNQYVKFEQLPEQASEPSDVEVHAETESATVTATSKPKAIE 301 (587) T ss_pred cccCceeEEEeeccccccccceEEEeehhhhhhhhhhhccccceeeccccchhhhhhcccccccccceeeeecccccccc Confidence 1000000000 00000 Q ss_pred ---hhhccCCccCcccchhhhhhhcccccccccchhhhhhhhccccccceeEEeccccCCcccccccchhHHHHHHHHHH Q lcl|Aclame:pro 390 ---DAKFSGGKDELSLDKEEMYKRLGGEKNEEGFVTKQGAYQYLENYEVDYVIPLGVHADTKLIGKYDDFAYQLALACAV 466 (717) Q Consensus 390 ---~~~ltgG~dG~~~~a~e~~~al~~~~~~~~~v~~~~~~~~le~~~vd~vi~~~~~a~t~~~~~~~~~~~~~a~~~~~ 466 (717) ...|+||.||. ....++..+..+++++++.+.+.. ....++..+..||+. T Consensus 302 ~~~~~aLtGG~dG~------------------~~~~y~~~l~ale~~~~~~i~~~t---------~d~ai~~~l~a~vk~ 354 (587) T protein:vir:96 302 PFELTKLSGGTNGE------------------PPTSWSAKLEKFKNEGGYYIVPLT---------DRQSVHSEVATFVKN 354 (587) T ss_pred cccceeeecCCCCC------------------CcccHHHHHHHHhhCCcEEEEecC---------CCHHHHHHHHHHHHH Confidence 00022222221 111223334455666665554321 011234556667766 Q ss_pred HhhcccceeEEecCCCcchhhHHHHHHHHHHHHhhhhhhhhcccccccccchhhhhccccceeEEEeCcEEEEecccCcc Q lcl|Aclame:pro 467 MSHYNSVTIGIIPTTTPSDISLAGVEEHVKKLENYANEFYMRDRFGNIIFDADRNKIDLGQFIEVVAGPDFIVRNTRLGQ 546 (717) Q Consensus 467 ~s~~~~~~i~ii~~~~~~~~~~a~v~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~v~~p~~~v~~~~~~~~ 546 (717) ++..++.++.+++..+..+. ++...+. ..++ +.++..++++..+.+...... T Consensus 355 ~r~~gk~~~aVlg~~~~~~~-----~~~~~~a----------------------~~~n-~e~vi~v~~~~~~~~~~~~~~ 406 (587) T protein:vir:96 355 RSDAGEPMRAIVGGGTSETK-----EKLFGRQ----------------------AILN-NPRVALVANSGKFVMGNGRIL 406 (587) T ss_pred HHhCCCeEEEEecCCCCCCH-----HHHHHHH----------------------hhcC-CCcEEEEecceEEecCCCcee Confidence 66655666666655443221 1111110 1111 122334555555444432222 Q ss_pred eee--chhHHHHHHHhcCCcccccCCceecccccccccCCHHHHHHHHhCCcEEEEEEcCceEEEE---eceecC--CCC Q lcl|Aclame:pro 547 MAS--TPDASYIGMVSQLKTQSAPTNKPLPSVTALRYTYSANQLNRLTKARFATFKYKQDGSIGVV---DAPTSA--HAG 619 (717) Q Consensus 547 ~~~--p~ag~vAGl~A~~gv~~SpaNk~L~gv~~l~~~lt~~e~d~L~~~GI~~ir~~~g~G~~v~---g~rTt~--s~d 619 (717) .+. .+++++||++|++++++||+|+++. +.++..+|+++|+++|+++|+++|+..++++.++| .+.|+. ..+ T Consensus 407 ~~~~~~~aa~vAG~~Ag~~~~~S~T~~~~~-~~~v~~~~t~~e~~~~i~~G~~~l~~~~~~~~~v~~~vnsitT~t~~~~ 485 (587) T protein:vir:96 407 QAPAYMVASAVAGLVSGLDIGESITFKPLF-VNSLDKVYESEELDELNENGIITIEFVRNRMTTMFRIVDDVTTFPDKND 485 (587) T ss_pred eechhhHHHHHHHHHhcCccccCccceeee-cccccccCCHHHHHHHHhCCeEEEEEecCCcEEEEEeeccceecCCCCC Confidence 222 2378999999999999999999998 46899999999999999999999998888765555 456653 346 Q ss_pred ccceeeehhhhHHHHHHHHHHHH-HHhccccCCHHHHHHHHHHHHHHHHHHHhCCceecceeeeecChhhhhCCEEEEEE Q lcl|Aclame:pro 620 SDYTRLSTARIVKEAVNAVREVA-DPFIGEPNDTGNRNALTAAVDKRLSKMIENKALLGFDFRLVVTPQQELLGEGSIEL 698 (717) Q Consensus 620 s~~~~I~vrR~~d~I~~~I~~~~-~~~IgepN~~~~~~~i~~~I~~fL~~L~~~GaI~G~~~~~~~t~~~i~~G~l~v~i 698 (717) ..|++|+++|++|+|.++|++.+ ++||||||++.+|..|+..|+.||++|+++|+|.+|++++. +-....++++|++ T Consensus 486 ~~~~~i~virv~D~i~~di~~~~~~~yiGk~nn~~~r~~v~~~i~~~L~~l~~~g~I~~~~~~dv--~v~~~~D~~~v~~ 563 (587) T protein:vir:96 486 PVKSEMALGEANDFLVSELKILLEEQYIGTRTINTSASQIKDFVQSYLGRKKRDNEIQDFPPEDV--QVIIEGNEARISL 563 (587) T ss_pred chhhhhhhHHHHHHHHHHHHHHHHhcCCccccCHHHHHHHHHHHHHHHHHHHhCCcccCCCccce--EEEecCCEEEEEE Confidence 67999999999999999999887 58999999999999999999999999999999999987432 1123456899999 Q ss_pred EEEccccccEEEEEEEEeC Q lcl|Aclame:pro 699 SLEAPNELRRLTTIVSLSA 717 (717) Q Consensus 699 ~v~P~~p~e~I~v~i~~ta 717 (717) .++|++|||||++++++.- T Consensus 564 ~v~Pv~~mekIy~tv~~~~ 582 (587) T protein:vir:96 564 TIFPIRALKKISVSLVYRQ 582 (587) T ss_pred EEEEcccceEEEEEEEEEe Confidence 9999999999999999876 No 23 >protein:vir:98824 Length: 774 # NCBI annotation: putative phage tail sheath protein # Family: family:all:661 # MgeID: mge:1530 # MgeName: Ma-LMM01 # Cross-refs: genbank:acc:YP_851105;genbank:gi:117530262;genbank:GeneID:4484488 Probab=100.00 E-value=2.8e-69 Score=396.40 Aligned_cols=448 Identities=14% Similarity=0.139 Sum_probs=280.6 Q ss_pred CCcch-------hcccCCceeEEEecCccccCcCCCC-CcceeEEEEEeeccCCcccceecCHHHH-HHhhCCcccccCC Q lcl|Aclame:pro 1 MAGFD-------QYQAIPGHNARFKDGNLNLKSDPNP-RETESVVLLGTATDGPVMQPVRVTPETA-YNIFGKVAHENGV 71 (717) Q Consensus 1 ~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~g~~~~gp~~~~~~~~~~~~-~~~fg~~~~~~~~ 71 (717) .+|-| ||+. ||||||+.+.+. +++++ .+|++.+.||.|+|||+++|+||+++.. .+-||+. T Consensus 270 ~~~~~~~~~~~~~v~~-~GVYVEEVpSGv---rtIeGGV~TSVAAFVG~A~rGPvn~PvlITS~aD~~~~Fg~~------ 339 (774) T protein:vir:98 270 CAGVEPFGEITRNVED-NGVVIQLEPALT---GSISNRFSFYVTANDNTANRGFTTSPALVTTIPDPAIHFTSF------ 339 (774) T ss_pred hcccccccceEEEEec-CceEEEEeCCCC---ccccccccceeeeecccccCCCCCcCEEEeehhHhhhhhccc------ Confidence 44433 5666 999999999998 88987 8999999999999999999999975554 4447753 Q ss_pred cchHHHHHHHHHHHHccCCcEEEEEEecCcceeeeeecccccccccccCCcccceeecCcccceeeccCCcceeeeEEEe Q lcl|Aclame:pro 72 YNGATLLPKFEELWAAGNRDIRLMRTTGVNAVSSLLGTSYSKNSKEVAEDKLGGAQARGNVAATFTLPNGGIVEATFLLK 151 (717) Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (717) ..|. +|+.+++ |. + T Consensus 340 -~GGl----------~GassA~--r~-----------------------------------------------------~ 353 (774) T protein:vir:98 340 -QGGL----------DGPRSAF--RD-----------------------------------------------------F 353 (774) T ss_pred -cCCc----------cccceee--ee-----------------------------------------------------e Confidence 1110 0000000 00 0 Q ss_pred ecceeecCceeEeccccceeeccccccchhheeecCCcccccccceeehhhhhhhhheeeeeeeEeecccccccccCccc Q lcl|Aclame:pro 152 ARGVIIPPNNYTLDVGTEEDMKAGTQPTFAQVLLNENVADMESEITVSYEFTYKDAQGETKTSEVLDNNTDKDGKPMIAK 231 (717) Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~gelld~~ie~~~~p~~~~ 231 (717) ++. . + T Consensus 354 ----------~~~---------s-------------G------------------------------------------- 358 (774) T protein:vir:98 354 ----------YTF---------N-------------G------------------------------------------- 358 (774) T ss_pred ----------eee---------c-------------c------------------------------------------- Confidence 000 0 0 Q ss_pred CCceEEEEEeeccccceeeecCccccccchheeccceeEEEEecCccccceEEEEeecccccccccceEEEeeccccccc Q lcl|Aclame:pro 232 GADVTIKLEHVALAGLKLYADGIEVVDAKAFTVAGDQLTIHSNSKMKLGASLEAQYAYNLVEVIQPVIELESIFGGGVYN 311 (717) Q Consensus 232 ~ag~i~a~r~~~a~~a~~~~~g~~~~~s~~~g~~an~i~v~l~d~~~t~~~l~v~~a~~~~~~~~d~i~l~a~~~G~~GN 311 (717) .+.+.|+|+.+|.||| T Consensus 359 ----------------------------------------------------------------~~~L~i~A~~pGawGN 374 (774) T protein:vir:98 359 ----------------------------------------------------------------TPLLRLQAVSEGNWGN 374 (774) T ss_pred ----------------------------------------------------------------cceEEEEEeecCcCCC Confidence 0123344445555555 Q ss_pred eEEEEEecCCc-eEEEEEeeeccCcc--ceeeeeeeeccccchhHH-----------------HHHHHhhcCccceeEEe Q lcl|Aclame:pro 312 DIMRKVESKDG-AVTVTITKPESKRG--MISEDPLVFKSGDYTNFK-----------------MLVDAINNHPFNNVVRA 371 (717) Q Consensus 312 ~i~I~v~~~~~-~~t~~lt~~~~~~~--~~~~~~~~l~~g~~~~~~-----------------~lv~~IN~~~~~~~~~a 371 (717) .+++++..... .....+.......- ......+....++..... ...+.+|..+....... T Consensus 375 ~ItV~I~~~t~~~~~l~v~~~~~s~f~~~~a~e~~tv~~~~~~~~~~v~e~~dn~~i~~~~~~~~~~~in~vs~lv~~~~ 454 (774) T protein:vir:98 375 QVTVSIYPVNNSEFRLNVQDLNGSAFNPPLADEVYTVKLGDTNESGELNALLDSKFIRGFFLPKSIDSINYDAALVRQSP 454 (774) T ss_pred ceEEEEEecCCceeEEEEEecCCccccccccceeEEEecccccccceeeeeeceeeEeecccccccccccccccccccch Confidence 55554432211 11111111000000 000000000000000000 00011111111111000 Q ss_pred ee--ccc-ccccc--cc-----ccchhhhhhccCCccCcccchhhhhhhcccccccccchhhhhhhhccccccceeEEec Q lcl|Aclame:pro 372 RT--KPE-FEATF--TS-----TLQAAADAKFSGGKDELSLDKEEMYKRLGGEKNEEGFVTKQGAYQYLENYEVDYVIPL 441 (717) Q Consensus 372 ~~--~~~-~~~~l--~s-----~~~~~~~~~ltgG~dG~~~~a~e~~~al~~~~~~~~~v~~~~~~~~le~~~vd~vi~~ 441 (717) .. .++ ....+ .. .........+.+|.||.....+.+-. .....+...++.+... T Consensus 455 ~~~a~~d~~~~~~~~~~~~~~~~~~~~v~v~lagG~Dg~~tt~~~igg----------------~~~~~~~tgi~aLl~a 518 (774) T protein:vir:98 455 LRLAPPDESETDVENPAHVDFYGPNVLVDVTLENGYDGPPVTNDDYVS----------------IIRTLENQPVHILLVG 518 (774) T ss_pred hcccccccccccccccccccccCCcceEEEeecCCCCcccccchheec----------------ccccccccceeEEEcC Confidence 00 000 00000 00 00001123456676665444433311 1112233334443321 Q ss_pred cccCCcccccccchhHHHHHHHHHHHhhcccceeEEecCCCcchhhHHHHHHHHHHHHhhhhhhhhcccccccccchhhh Q lcl|Aclame:pro 442 GVHADTKLIGKYDDFAYQLALACAVMSHYNSVTIGIIPTTTPSDISLAGVEEHVKKLENYANEFYMRDRFGNIIFDADRN 521 (717) Q Consensus 442 ~~~a~t~~~~~~~~~~~~~a~~~~~~s~~~~~~i~ii~~~~~~~~~~a~v~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 521 (717) . ...++...+..||..+....+.++.++...+. .....+.++.. T Consensus 519 ~---------~~~~V~~aii~~~e~~~~~~~~r~avid~p~g--~t~~~Ai~~r~------------------------- 562 (774) T protein:vir:98 519 T---------TNVGVQQALITEAERASDSDGLRIAVLAAPPR--TTPTLAASVTR------------------------- 562 (774) T ss_pred c---------cchhhHHHHHHHHHHhhhcccceEEEEECCCC--CCHHHHHHHHh------------------------- Confidence 1 12234566777888776666667766653322 21122211110 Q ss_pred hccccceeEEEeCcEEEEecccCcceeechhHHHHHHHhcCCcccccCCceeccccccccc------CCHHHHHHHHhCC Q lcl|Aclame:pro 522 KIDLGQFIEVVAGPDFIVRNTRLGQMASTPDASYIGMVSQLKTQSAPTNKPLPSVTALRYT------YSANQLNRLTKAR 595 (717) Q Consensus 522 ~~~~~~~~~v~~p~~~v~~~~~~~~~~~p~ag~vAGl~A~~gv~~SpaNk~L~gv~~l~~~------lt~~e~d~L~~~G 595 (717) ...+.|+.+++||++++++.....+++|||+++||++|++++|+||+|++|.|++++..+ +++.|++.|+.++ T Consensus 563 -~f~S~~aal~~Pwvkv~D~~~g~~~~vPpSg~vAGl~ArtDv~kSPANk~I~Givg~ai~~~l~~~~t~ae~d~Ln~~g 641 (774) T protein:vir:98 563 -GFNSTRAVMVAGWFTYAGQPNSSRYGVPGAAVYAGKLAAIDFFVSPAARSLVGPLFNIIESDTDNYTSRSNQDIYSAAR 641 (774) T ss_pred -ccCCceEEEEeCcEEEeccCCCceeecChhHHHHHHHHhcCcccccCCceeecceeccccccccccccchhhhhhcccc Confidence 012467889999999999998899999999999999999999999999999999876544 4688999999999 Q ss_pred cEEEE-EEcCceEEEEeceecCCCCccceeeehhhhHHHHHHHHHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHhCCc Q lcl|Aclame:pro 596 FATFK-YKQDGSIGVVDAPTSAHAGSDYTRLSTARIVKEAVNAVREVADPFIGEPNDTGNRNALTAAVDKRLSKMIENKA 674 (717) Q Consensus 596 I~~ir-~~~g~G~~v~g~rTt~s~ds~~~~I~vrR~~d~I~~~I~~~~~~~IgepN~~~~~~~i~~~I~~fL~~L~~~Ga 674 (717) ||+++ .++++|+++||+||+ +.|++|+||++||++|+|+++|++.++|++||||++.+|.+|++.|+.||++||++|+ T Consensus 642 IN~i~itt~g~G~rvWG~RTl-ssDp~wr~InVRRlfd~Ie~SI~~~~~~~VfEPNd~~l~~~I~~sI~~fL~~L~~~Ga 720 (774) T protein:vir:98 642 LEVLSLDTVDRTYRFASGVTL-STDPAWERIYLRRVHDVVRQGAHAILRNYVAMPNSRLVRNQIAAALNAFMGELKRNGN 720 (774) T ss_pred cceeEEEEcCCcEEEEccccc-CCCcccceEeehhhHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCc Confidence 99998 678999999999998 4689999999999999999999999999999999999999999999999999999999 Q ss_pred eecce---eee-ecChhhhhCCEEEEEEEEEccccccEEEEEEEEeC Q lcl|Aclame:pro 675 LLGFD---FRL-VVTPQQELLGEGSIELSLEAPNELRRLTTIVSLSA 717 (717) Q Consensus 675 I~G~~---~~~-~~t~~~i~~G~l~v~i~v~P~~p~e~I~v~i~~ta 717 (717) |.|++ |+. +|+|+++++|+++++|+++|++|+|||++++.+.. T Consensus 721 L~G~~~V~~D~etNt~~dI~~G~l~i~I~vaP~~PAEfIilri~q~t 767 (774) T protein:vir:98 721 IVSFRPAIIDGSNNSTAAYFSRELYVSLQFQPLYSADYIYVTISRDT 767 (774) T ss_pred eecceEEEEcCCCCCHHHhhCCEEEEEEEEEecCCcceEEEEEEEee Confidence 99986 343 47778899999999999999999999999999988 No 24 >protein:vir:100829 Length: 607 # NCBI annotation: hypothetical protein # Family: family:all:2449 # MgeID: mge:1633 # MgeName: LP65 # Cross-refs: genbank:acc:YP_164738;genbank:gi:56693151;genbank:GeneID:3197462 Probab=100.00 E-value=8.4e-69 Score=393.79 Aligned_cols=544 Identities=14% Similarity=0.105 Sum_probs=337.2 Q ss_pred ccceeeccCCcceeeeEEEeecceeecCcee-EeccccceeeccccccchhheeecCCcccccccceeehhhhhhhhhee Q lcl|Aclame:pro 132 VAATFTLPNGGIVEATFLLKARGVIIPPNNY-TLDVGTEEDMKAGTQPTFAQVLLNENVADMESEITVSYEFTYKDAQGE 210 (717) Q Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~ 210 (717) .-++| -|.--|.+ +|-+-...+|..| ..|++.+.-+... ...+.+..|.+..|.+.++..-++++|||+. T Consensus 1 ~~~~~--~~~~~~~~---~~~~~~~~~pgv~~~~~~~~~~~~~~~----~~~~~~~iG~a~~G~~~~~~~~~~~~~a~~~ 71 (607) T protein:vir:10 1 MTTTI--TSAESYKR---IYPLFYDSRPHVETNFDDSRLSNTASD----SAKNIFMLGSATNGDPTKVYEIRTSQQATKI 71 (607) T ss_pred Cccee--cchhhHHH---HhCCCCccCCceEEEEecCcCcCCCCC----CcceEEEEEEeCCCCCceEEEEcchhHHHHh Confidence 11122 12222222 2333446677777 7777776444443 4455566699999999999999999999999 Q ss_pred eeeeeEeecccccccccCcc--cCCceEEEEEeeccccceeeecCccccccchheeccceeEEEEecCcccc-ceEEEEe Q lcl|Aclame:pro 211 TKTSEVLDNNTDKDGKPMIA--KGADVTIKLEHVALAGLKLYADGIEVVDAKAFTVAGDQLTIHSNSKMKLG-ASLEAQY 287 (717) Q Consensus 211 ~~~gelld~~ie~~~~p~~~--~~ag~i~a~r~~~a~~a~~~~~g~~~~~s~~~g~~an~i~v~l~d~~~t~-~~l~v~~ 287 (717) |++|+||++ |+++|+|+.. .|+|.+++|||+++++|++.++|+. |+|+.||+.+|+||++| ++.+++ +++++.| T Consensus 72 f~~g~l~~a-~~~a~~~~~~~~~g~~~~~~~rv~~~~~a~~~~~~~~-~~~~~~~~~~~~i~~~l-~~~~~~~~~~~~~~ 148 (607) T protein:vir:10 72 FGSGDLVDG-IKLAFDPTGNSVTNGGTVYALRVDNAKQASLVKDGLT-FTSSIFGTNANQVSVAL-DNDVFGVPRITVNY 148 (607) T ss_pred hcCcchHHH-HHHhhccccCCccCCceEEEEeCCCccccceeccccc-ccccccccCCCceEEEE-EecCCCccceeEEe Confidence 999999998 9999999754 6889999999999999999999996 58999999999999999 677775 7899999 Q ss_pred ecccccccccceEEEeeccccccceEEEEEecCCceEEEEEeee--------ccC-----ccceeeeeeeeccccchhHH Q lcl|Aclame:pro 288 AYNLVEVIQPVIELESIFGGGVYNDIMRKVESKDGAVTVTITKP--------ESK-----RGMISEDPLVFKSGDYTNFK 354 (717) Q Consensus 288 a~~~~~~~~d~i~l~a~~~G~~GN~i~I~v~~~~~~~t~~lt~~--------~~~-----~~~~~~~~~~l~~g~~~~~~ 354 (717) .++.++.+|+ +| |+-++|+|++..+.++.++... +++ ...+++..+++..+.|.++. T Consensus 149 ~~d~~~~~~~--n~--------g~~~~i~y~g~~~~a~~~v~~~~~g~~~~lt~~~~~~~~~~~~V~~~~l~~~~~~t~~ 218 (607) T protein:vir:10 149 SPDNYERTYT--NI--------GQMFSITYSGKSASAGYTVSHDTDGKAILLTLGSGDSIDKLTNVATFDLTMSKYDTIA 218 (607) T ss_pred ecccceeeee--ec--------cceeecccCcccccccceeeecCCCceeEEEecCCCccceeeeeecccccccccchHH Confidence 9988777777 33 5556677766666655555421 111 12355677889999999999 Q ss_pred HHHHHhhcCccceeEEee-------ecccc--ccccccccc---h-hhhhhccCCccCcc-----cchhhhhhhcccccc Q lcl|Aclame:pro 355 MLVDAINNHPFNNVVRAR-------TKPEF--EATFTSTLQ---A-AADAKFSGGKDELS-----LDKEEMYKRLGGEKN 416 (717) Q Consensus 355 ~lv~~IN~~~~~~~~~a~-------~~~~~--~~~l~s~~~---~-~~~~~ltgG~dG~~-----~~a~e~~~al~~~~~ 416 (717) +++++||..|.+.+.... +.+.. +........ + ..+..+.-+.++.. ....+....... T Consensus 219 ~l~~din~~~~~~A~~~g~~~i~tky~d~~~~~i~V~~~~~iv~a~~~D~~~~~~~~~~~~~t~~~~~~~~~~~~~~--- 295 (607) T protein:vir:10 219 KLMQAISATPNFSASVVGSPSVNTSYLDEVTSPVDVKTAPAVVTAKIGDAISKLGYDPYVVVTQTSNNKPIVNGVSA--- 295 (607) T ss_pred HHHHHhhcCCceEEEEecccceeeeccccccceeEEEEeeeeechhhhhhhhcccccceEEeeecccchhhhhhhhc--- Confidence 999999999875443221 11110 000000000 0 00000000000000 000000000000 Q ss_pred cccchhhhhhhhccccccceeEEeccccCCcccccccchh-HHHHHHHHHHHhhcccceeEEecCCCcchhhHHHHHHHH Q lcl|Aclame:pro 417 EEGFVTKQGAYQYLENYEVDYVIPLGVHADTKLIGKYDDF-AYQLALACAVMSHYNSVTIGIIPTTTPSDISLAGVEEHV 495 (717) Q Consensus 417 ~~~~v~~~~~~~~le~~~vd~vi~~~~~a~t~~~~~~~~~-~~~~a~~~~~~s~~~~~~i~ii~~~~~~~~~~a~v~~~~ 495 (717) ........ ....... .+ ..++.+.+.++.++. ..++.+++..+.... ...+++ .+.....++.+..|+ T Consensus 296 ~~~~~~~~-~~~~~~~------~~-a~~a~~~LtGGtdG~~~~ty~dal~aLe~~e--~~~i~~-~t~d~ai~~~l~a~v 364 (607) T protein:vir:10 296 GTGSATAS-VTTAPES------FP-ANFDTAFLTGGSTGDVPVSWADKFNGAIGNN--VYYIIP-LTSEENIHAELQAFI 364 (607) T ss_pred cccceeee-eeccccc------cc-cccceeeeeCCCCCCchhhHHHHHHHHhhcC--ceEEEe-cCCCHHHHHHHHHHH Confidence 00000000 0000000 00 001111122222211 122333333332211 111121 122333344455555 Q ss_pred HHHHhhhhh-hhhcccccccccc---hhhhhccccceeEEEeCcEEEEecccCcceeec---hhHHHHHHHhcCCccccc Q lcl|Aclame:pro 496 KKLENYANE-FYMRDRFGNIIFD---ADRNKIDLGQFIEVVAGPDFIVRNTRLGQMAST---PDASYIGMVSQLKTQSAP 568 (717) Q Consensus 496 ~~~~~~~~~-~~~~d~~~~~~~~---~~~~~~~~~~~~~v~~p~~~v~~~~~~~~~~~p---~ag~vAGl~A~~gv~~Sp 568 (717) ++++..... .+++....+.... .....++ +..+..+.++..+.+.. .....| .++++||++|++++++|| T Consensus 365 kr~~~~g~~~~aVlg~~~~~t~~~~~t~a~~~N-~ervv~V~~~~~~~~~G--~~~~~~~~~~Aa~vAGl~Ag~~~~~Sl 441 (607) T protein:vir:10 365 DEQHVLGYNYHAFVGGGFAEPLEQILSRQVNIN-DSRFGLVGQSGHVQEGG--ESVHVPAYLMAAYVGGLSSSLGVAVPI 441 (607) T ss_pred HHHHhCCCcEEEEecCCCCCCHHHHHHHHHhhC-CCcEEEEecCeeEeeCC--cceeccHHHHHHHHHHHHhcCccccCc Confidence 544332221 1111111111000 0011111 22233444544433321 123333 378999999999999999 Q ss_pred CCceecccccccccCCHHHHHHHHhCCcEEEEEEcC----ceEEEEeceecC--CCCccceeeehhhhHHHHHHHHHHHH Q lcl|Aclame:pro 569 TNKPLPSVTALRYTYSANQLNRLTKARFATFKYKQD----GSIGVVDAPTSA--HAGSDYTRLSTARIVKEAVNAVREVA 642 (717) Q Consensus 569 aNk~L~gv~~l~~~lt~~e~d~L~~~GI~~ir~~~g----~G~~v~g~rTt~--s~ds~~~~I~vrR~~d~I~~~I~~~~ 642 (717) +|+++. +.++..+|+++|+++|+++|+++|+..++ +++|++.+.|+. .++..|++|+++|++|+|.+.|++.+ T Consensus 442 T~k~i~-~~~v~~~lt~~e~e~ai~~Gv~~l~~~~~~~~~~~vrIv~~ItT~t~~~~~~~~~i~viRv~D~i~~dir~~~ 520 (607) T protein:vir:10 442 TNKKLA-LVDLDQNFSGDDLNTLNQNGVIGIEHLVNRNATGGYYIVQDVSTNTVSSSHVDGSLYLGELTDFLFDNLRFVL 520 (607) T ss_pred ccceec-cccccccCCHHHHHHHHhCCeEEEEEccCccccceEEEeeeeeeccCCCCcchheeehhhhHHHHHHHHHHHH Confidence 999996 67899999999999999999999976543 479999999984 45677999999999999999999887 Q ss_pred -HHhccccCCHHHHHHHHHHHHHHHHHH--HhCCceecceeeeecChhhhhCCEEEEEEEEEccccccEEEEEEEEeC Q lcl|Aclame:pro 643 -DPFIGEPNDTGNRNALTAAVDKRLSKM--IENKALLGFDFRLVVTPQQELLGEGSIELSLEAPNELRRLTTIVSLSA 717 (717) Q Consensus 643 -~~~IgepN~~~~~~~i~~~I~~fL~~L--~~~GaI~G~~~~~~~t~~~i~~G~l~v~i~v~P~~p~e~I~v~i~~ta 717 (717) ++||||+|++..|..++..+..+|..+ ...|+|.+|++++.. -....+++++++.++|+++||+|++++++.. T Consensus 521 ~~~yIGk~nnd~~~~~vk~~i~~~L~~~~l~~~gaI~df~~edv~--v~~~~D~v~v~~~v~Pv~~iekIyvtv~v~~ 596 (607) T protein:vir:10 521 RDTYIGSNIRSTSADDIKSTVASYLYSEMNNDDGLIVDFSESDIV--VTISGTVVYIQFAVAPTQEIKNIVVSGTYSN 596 (607) T ss_pred hhcCCcccCCcchHHHHHHHHHHHHHHHHHHhcCceeCCCccccE--EeeCCCEEEEEEEEEEcccceEEEEEEEEEE Confidence 589999999999999999999999654 457999999864321 1123468999999999999999999999988 No 25 >protein:vir:79092 Length: 477 # NCBI annotation: gp13, phage tail sheath protein # Family: family:all:115 # MgeID: mge:1862 # MgeName: phiE255 # Cross-refs: genbank:acc:YP_001111213;genbank:gi:134288804;genbank:GeneID:4960766 Probab=100.00 E-value=1.9e-66 Score=380.86 Aligned_cols=445 Identities=17% Similarity=0.171 Sum_probs=271.6 Q ss_pred CCcchhcccCCceeEEEecCccccCcCCCCCcceeEEEEEeeccCCcccceecC-HHHHHHhhCCcccccCCcchHHHHH Q lcl|Aclame:pro 1 MAGFDQYQAIPGHNARFKDGNLNLKSDPNPRETESVVLLGTATDGPVMQPVRVT-PETAYNIFGKVAHENGVYNGATLLP 79 (717) Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~gp~~~~~~~~-~~~~~~~fg~~~~~~~~~~~~~~~~ 79 (717) |+. +| +|||+|++.+.+. .+++.++|++.++||+|++||+++|++|+ +.++.+.||.. ..++|-+ T Consensus 1 M~~--~~--~pGVyv~E~~~g~---~~I~~v~Tsv~~~VG~a~~~p~n~pv~its~~d~~~~g~~~-------~~~tL~~ 66 (477) T protein:vir:79 1 MAA--NY--LHGVETIEKETGS---RPVKVVKSAVIGLIGTAPIGPVNTPVQSLSDVDAAQFGPQL-------AGFTIPQ 66 (477) T ss_pred CcC--CC--CCCeEEEEecCCc---ccccccCCceEEEEeecccCCCcccEEEccHHHHHHhcCCC-------CCCcHHH Confidence 994 55 6999999999999 89999999999999999999999999996 55666544432 2345555 Q ss_pred HHHHHHHccCCcEEEEEEecCcceeeeeecccccccccccCCcccceeecCcccceeeccCCcceeeeEEEeeccee--e Q lcl|Aclame:pro 80 KFEELWAAGNRDIRLMRTTGVNAVSSLLGTSYSKNSKEVAEDKLGGAQARGNVAATFTLPNGGIVEATFLLKARGVI--I 157 (717) Q Consensus 80 ~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 157 (717) |...+|.+|+.+||++|+.++.......+. ..............+ +.......+.-..+.. . T Consensus 67 Av~~~f~ngg~~~~vvrV~~~~~~~~~~a~---------~~~~~~~~~~~~~~~-------~~~~~~~~v~~~~~~~~~~ 130 (477) T protein:vir:79 67 ALDAVYDYGSGTVIVINVLDPAVHKSNAAS---------ESVTFDAATGRAKLA-------HPAAANLVLKNDSGGTTYT 130 (477) T ss_pred HHHHHhhcCCceEEEEeccCCccccccccc---------ccccccccccccccc-------ccccceeEEeecccccccc Confidence 555569999999999999976432211110 000000000000000 0111000000000000 0 Q ss_pred cCceeEeccccceeeccccccchhheeecCCcccccccceeehhhhhhhhheeeeeeeE---eecccccccccCcccCCc Q lcl|Aclame:pro 158 PPNNYTLDVGTEEDMKAGTQPTFAQVLLNENVADMESEITVSYEFTYKDAQGETKTSEV---LDNNTDKDGKPMIAKGAD 234 (717) Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~gel---ld~~ie~~~~p~~~~~ag 234 (717) ....++++. + .. +. ........ +.. ++...+ ..++.....+ T Consensus 131 ~~~~~~~~~----------------~---~~----~~----~~~~~~~~-------~~~~~~~~~~~~-~~~~~~~~~~- 174 (477) T protein:vir:79 131 EGTDYAVDL----------------I---NG----VI----TRIKTGTI-------PAAATAAKATYD-YADPTKVTAA- 174 (477) T ss_pred cCccccccc----------------c---ch----hh----hhhhcccc-------ccccceeeceec-cCCcccceee- Confidence 000011100 0 00 00 00000000 111 110000 0000000000 Q ss_pred eEEEEEeeccccceeeecCccccccchheeccceeEEEEecCccccceEEEEeecccccccccceEEEeeccccccceEE Q lcl|Aclame:pro 235 VTIKLEHVALAGLKLYADGIEVVDAKAFTVAGDQLTIHSNSKMKLGASLEAQYAYNLVEVIQPVIELESIFGGGVYNDIM 314 (717) Q Consensus 235 ~i~a~r~~~a~~a~~~~~g~~~~~s~~~g~~an~i~v~l~d~~~t~~~l~v~~a~~~~~~~~d~i~l~a~~~G~~GN~i~ 314 (717) . + .|. .+. T Consensus 175 ------------------~--~-----~g~---------~~a-------------------------------------- 182 (477) T protein:vir:79 175 ------------------D--I-----IGA---------VNA-------------------------------------- 182 (477) T ss_pred ------------------e--e-----ccc---------ccc-------------------------------------- Confidence 0 0 000 000 Q ss_pred EEEecCCceEEEEEeeeccCccceeeeeeeeccccchhHHHHHHHhhcCccceeEEeeeccccccccccccchhhhhhcc Q lcl|Aclame:pro 315 RKVESKDGAVTVTITKPESKRGMISEDPLVFKSGDYTNFKMLVDAINNHPFNNVVRARTKPEFEATFTSTLQAAADAKFS 394 (717) Q Consensus 315 I~v~~~~~~~t~~lt~~~~~~~~~~~~~~~l~~g~~~~~~~lv~~IN~~~~~~~~~a~~~~~~~~~l~s~~~~~~~~~lt 394 (717) . . ..+|. ..|- .... T Consensus 183 ------~----------~------------~~tg~----~al~-~~~~-------------------------------- 197 (477) T protein:vir:79 183 ------A----------G------------MRTGM----KALK-DTYN-------------------------------- 197 (477) T ss_pred ------c----------c------------cchhh----hhhh-hhhh-------------------------------- Confidence 0 0 00000 0000 0000 Q ss_pred CCccCcccchhhhhhhcccccccccchhhhhhhhccccccceeE-EeccccCCcccccccchhHHHHHHHHHHHhhcccc Q lcl|Aclame:pro 395 GGKDELSLDKEEMYKRLGGEKNEEGFVTKQGAYQYLENYEVDYV-IPLGVHADTKLIGKYDDFAYQLALACAVMSHYNSV 473 (717) Q Consensus 395 gG~dG~~~~a~e~~~al~~~~~~~~~v~~~~~~~~le~~~vd~v-i~~~~~a~t~~~~~~~~~~~~~a~~~~~~s~~~~~ 473 (717) .+ ....+++ .|... ....+...+..+|... . T Consensus 198 ------------~~-----------------------~~~~~iv~apg~~--------~~~~v~~~l~~~~~~~-----~ 229 (477) T protein:vir:79 198 ------------LY-----------------------GYFSKILIAPAYC--------TQNSVSVELEAMAVQL-----G 229 (477) T ss_pred ------------hc-----------------------ccccceeeccccc--------cchhHHHHHHHHHhhc-----C Confidence 00 0000000 00000 0011233444455432 1 Q ss_pred eeEEecCCCcchhhHHHHHHHHHHHHhhhhhhhhcccccccccchhhhhccccceeEEEeCcEEEEecccCcceeechhH Q lcl|Aclame:pro 474 TIGIIPTTTPSDISLAGVEEHVKKLENYANEFYMRDRFGNIIFDADRNKIDLGQFIEVVAGPDFIVRNTRLGQMASTPDA 553 (717) Q Consensus 474 ~i~ii~~~~~~~~~~a~v~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~v~~p~~~v~~~~~~~~~~~p~ag 553 (717) .+.++.... ....+.+..+.+.... ......+.++.++|||+.++++...+.+++|||+ T Consensus 230 ~~a~~d~p~--~~~~~~~~~~~~~~~~-------------------~~~~~~s~~~~~~~p~~~~~~~~~~~~~~~p~s~ 288 (477) T protein:vir:79 230 AIAYIDAPI--GTTLAQALAGRGPAGT-------------------INFNTSSDRVRLCYPHVKVYDIATNAERLEPLSS 288 (477) T ss_pred eEEEEecCC--CCChHHHhhhhhhccc-------------------cccccccceEEEEcCeeEEecccCCceeeechHH Confidence 233433221 1112222222211100 0011235778899999999999989999999999 Q ss_pred HHHHHHhcC----CcccccCCceecccccccccC------CHHHHHHHHhCCcEEEEEEcCceEEEEeceecC--CCCcc Q lcl|Aclame:pro 554 SYIGMVSQL----KTQSAPTNKPLPSVTALRYTY------SANQLNRLTKARFATFKYKQDGSIGVVDAPTSA--HAGSD 621 (717) Q Consensus 554 ~vAGl~A~~----gv~~SpaNk~L~gv~~l~~~l------t~~e~d~L~~~GI~~ir~~~g~G~~v~g~rTt~--s~ds~ 621 (717) ++||++|++ |+|+||+|++|.|+.++.+++ ++.|++.|+++||++|++++++|+++||+||+. +.++. T Consensus 289 ~~ag~~a~~d~~~g~~~span~~~~gv~~~~~~~~~~~~~~~~~~~~L~~~~i~~i~~~~~~G~~~wG~rT~~~~~~~~~ 368 (477) T protein:vir:79 289 RAAGLRARVDLDKGYWWSSSNQQLVGVTGVERPLSAMIDDPQSDVNMLNEQGITTVFSSYGSGLRLWGNRTAAWPTVTHM 368 (477) T ss_pred HHHHHHHHhhccCCceEccCCceeecceecccccccccCCChhhHHHHhhCCceEEEEecCCcEEEEcccccCCCCCCcc Confidence 999999975 899999999999999988775 357899999999999999999999999999995 45677 Q ss_pred ceeeehhhhHHHHHHHHHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHhCCceecceee---eecChhhhhCCEEEEEE Q lcl|Aclame:pro 622 YTRLSTARIVKEAVNAVREVADPFIGEPNDTGNRNALTAAVDKRLSKMIENKALLGFDFR---LVVTPQQELLGEGSIEL 698 (717) Q Consensus 622 ~~~I~vrR~~d~I~~~I~~~~~~~IgepN~~~~~~~i~~~I~~fL~~L~~~GaI~G~~~~---~~~t~~~i~~G~l~v~i 698 (717) |+|+++||++++|+++|++.++|++||||++.+|.+|++.|+.||++||++|+|.||+++ ++|+++++.+|+++++| T Consensus 369 ~~~i~vrR~~~~i~~~~~~~~~~~v~e~~~~~~~~~i~~~i~~~l~~l~~~g~l~g~~v~~~~~~nt~~~i~~G~~~~~i 448 (477) T protein:vir:79 369 RNFENVRRTGDVINESLRYFSQQFVDAPIDQGLIDSLVESVNGFGRKLIGDGALLGFKAWFDPARNPKEELAAGHLLINY 448 (477) T ss_pred ceeeehhhHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeEEEEecCCCCHHHhhCCeEEEEE Confidence 999999999999999999999999999999999999999999999999999999999863 46889999999999999 Q ss_pred EEEccccccEEEEEEEEeC Q lcl|Aclame:pro 699 SLEAPNELRRLTTIVSLSA 717 (717) Q Consensus 699 ~v~P~~p~e~I~v~i~~ta 717 (717) +++|++|+|||++++.+.- T Consensus 449 ~~~p~~p~e~i~~~~~~~~ 467 (477) T protein:vir:79 449 KYTVPPPLERLTYETEITS 467 (477) T ss_pred EEEecCCceeEEEEEEEec Confidence 9999999999999999988 No 26 >protein:vir:107865 Length: 477 # NCBI annotation: gp39 # Family: family:all:115 # MgeID: mge:1565 # MgeName: BcepMu # Cross-refs: genbank:acc:YP_024712;genbank:gi:48696949;genbank:GeneID:2845953 Probab=100.00 E-value=1.7e-65 Score=375.74 Aligned_cols=452 Identities=17% Similarity=0.168 Sum_probs=272.4 Q ss_pred CCcchhcccCCceeEEEecCccccCcCCCCCcceeEEEEEeeccCCcccceecCHHHHHHhhCCcccccCCcchHHHHHH Q lcl|Aclame:pro 1 MAGFDQYQAIPGHNARFKDGNLNLKSDPNPRETESVVLLGTATDGPVMQPVRVTPETAYNIFGKVAHENGVYNGATLLPK 80 (717) Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~gp~~~~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~~ 80 (717) |+. +| +|||+|++.+.+. .+++.++|++.++||+|++||+++|++||.....+.||.. ...++|.+| T Consensus 1 M~~--~~--~pGVyv~E~~~~~---~~i~~v~T~v~~~VG~a~~gp~n~pv~its~~d~~~~g~~------~~~~tL~~A 67 (477) T protein:vir:10 1 MAA--NY--LHGVETIEKETGS---RPVKVVKSAVIGLIGTAPIGPVNTPVQSLSDVDAAQFGPQ------LAGFTIPQA 67 (477) T ss_pred Ccc--cC--CCCeEEEEccCCc---ccccccCCceeEEEecccCCCCCcCEEEccHHHHHHhccC------CCCCcHHHH Confidence 985 35 6999999999999 8999999999999999999999999999754333457643 344677777 Q ss_pred HHHHHHccCCcEEEEEEecCcceeeeeecccccccccccCCcccceeecCcccceeeccCCcceeeeEEEeecceeecCc Q lcl|Aclame:pro 81 FEELWAAGNRDIRLMRTTGVNAVSSLLGTSYSKNSKEVAEDKLGGAQARGNVAATFTLPNGGIVEATFLLKARGVIIPPN 160 (717) Q Consensus 81 ~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (717) ...+|++|+..||++|+.++....... .....+..... +.... .+.. .. + T Consensus 68 v~~~f~nGg~~~~vVrV~~~~~~~~~~-----~~~~~~~~~~~--~~~~~----------~~~~------------~~-~ 117 (477) T protein:vir:10 68 LDAVYDYGSGTVIVINVLDPAVHKSNA-----ANEPVTFDAAT--GRAKL----------AHPA------------AA-N 117 (477) T ss_pred HHHHHhccceEEEEEecCccccccccc-----ccccccccccc--ceecc----------cccc------------cc-c Confidence 777899999999999998664322100 00000000000 00000 0000 00 0 Q ss_pred eeEeccccceeeccccccchhheeecCCcccccccceeehhhhhhhhheeeeeeeEeecccccccccCcccCCceEEEEE Q lcl|Aclame:pro 161 NYTLDVGTEEDMKAGTQPTFAQVLLNENVADMESEITVSYEFTYKDAQGETKTSEVLDNNTDKDGKPMIAKGADVTIKLE 240 (717) Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~gelld~~ie~~~~p~~~~~ag~i~a~r 240 (717) ......... . ..++...+...+.+ .. ...+... .. ...+ .....+ T Consensus 118 ~~v~~~a~~------~----------------~~~~~~~~~~~~~~--~~---~~~~~~~-~~------~~~~-~~~~~~ 162 (477) T protein:vir:10 118 LVLKNDSGG------T----------------TYAEGTDYAVDLIN--GV---ITRIKTG-TI------PPGA-TAAKAT 162 (477) T ss_pred ccccccccc------c----------------ccccchhhhhhhcc--cc---ceecccc-cc------cccc-eeeeec Confidence 000000000 0 00000001111111 00 0001110 00 0000 000000 Q ss_pred eeccccceeeecCccccccchheeccceeEEEEecCccccceEEEEeecccccccccceEEEeeccccccceEEEEEecC Q lcl|Aclame:pro 241 HVALAGLKLYADGIEVVDAKAFTVAGDQLTIHSNSKMKLGASLEAQYAYNLVEVIQPVIELESIFGGGVYNDIMRKVESK 320 (717) Q Consensus 241 ~~~a~~a~~~~~g~~~~~s~~~g~~an~i~v~l~d~~~t~~~l~v~~a~~~~~~~~d~i~l~a~~~G~~GN~i~I~v~~~ 320 (717) +.... +. . +. .. + .+... T Consensus 163 ~~~~~-------~~-------------~--~~--~~--------------------~--~~g~~---------------- 180 (477) T protein:vir:10 163 YDYAD-------PT-------------K--VT--AA--------------------D--IIGAV---------------- 180 (477) T ss_pred ccccc-------cc-------------c--cc--cc--------------------c--ccccc---------------- Confidence 00000 00 0 00 00 0 00000 Q ss_pred CceEEEEEeeeccCccceeeeeeeeccccchhHHHHHHHhhcCccceeEEeeeccccccccccccchhhhhhccCCccCc Q lcl|Aclame:pro 321 DGAVTVTITKPESKRGMISEDPLVFKSGDYTNFKMLVDAINNHPFNNVVRARTKPEFEATFTSTLQAAADAKFSGGKDEL 400 (717) Q Consensus 321 ~~~~t~~lt~~~~~~~~~~~~~~~l~~g~~~~~~~lv~~IN~~~~~~~~~a~~~~~~~~~l~s~~~~~~~~~ltgG~dG~ 400 (717) + ..+..+.+..|-... T Consensus 181 ~------------------------~~~~~tGl~al~~~~---------------------------------------- 196 (477) T protein:vir:10 181 N------------------------AAGMRTGMKALKDTY---------------------------------------- 196 (477) T ss_pred c------------------------ccchhhhhhhhhhhh---------------------------------------- Confidence 0 000000000000000 Q ss_pred ccchhhhhhhcccccccccchhhhhhhhccccccceeEEeccccCCcccccccchhHHHHHHHHHHHhhcccceeEEecC Q lcl|Aclame:pro 401 SLDKEEMYKRLGGEKNEEGFVTKQGAYQYLENYEVDYVIPLGVHADTKLIGKYDDFAYQLALACAVMSHYNSVTIGIIPT 480 (717) Q Consensus 401 ~~~a~e~~~al~~~~~~~~~v~~~~~~~~le~~~vd~vi~~~~~a~t~~~~~~~~~~~~~a~~~~~~s~~~~~~i~ii~~ 480 (717) ..+.. .. -.+..|... ....+...+..+|.... .+.++.. T Consensus 197 -----~~~~~-------------------~~---~~l~apg~~--------~~~~v~~~l~~~~~~~~-----~~~~~d~ 236 (477) T protein:vir:10 197 -----NLYGY-------------------FS---KILIAPAYC--------TQNSVSVELEAMAVQLG-----AIAYIDA 236 (477) T ss_pred -----hhcch-------------------hc---ccccccccc--------cchhhHHHHHHHHhhCC-----EEEEEec Confidence 00000 00 000000000 00012233344444321 2333322 Q ss_pred CCcchhhHHHHHHHHHHHHhhhhhhhhcccccccccchhhhhccccceeEEEeCcEEEEecccCcceeechhHHHHHHHh Q lcl|Aclame:pro 481 TTPSDISLAGVEEHVKKLENYANEFYMRDRFGNIIFDADRNKIDLGQFIEVVAGPDFIVRNTRLGQMASTPDASYIGMVS 560 (717) Q Consensus 481 ~~~~~~~~a~v~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~v~~p~~~v~~~~~~~~~~~p~ag~vAGl~A 560 (717) +.....+.+..+.+.... ......+.++.++|||..++++...+.+++|||+++||++| T Consensus 237 --p~~~~~~~~~~~~~~~~~-------------------~~~~~~s~~~~~~~p~~~~~d~~~~~~~~~p~s~~~ag~~a 295 (477) T protein:vir:10 237 --PIGTTLAQALAGRGPAGT-------------------INFNTSSDRVRLCYPHVKVYDTATNAERLEPLSSRAAGLRA 295 (477) T ss_pred --CCCCCHHHHHhhhhhccc-------------------cccccccceEEEEcCeEEEecccCCceeEEchHHHHHHHHH Confidence 112222222222211111 00112356788999999999999999999999999999999 Q ss_pred cC----CcccccCCceecccccccccC------CHHHHHHHHhCCcEEEEEEcCceEEEEeceecCC--CCccceeeehh Q lcl|Aclame:pro 561 QL----KTQSAPTNKPLPSVTALRYTY------SANQLNRLTKARFATFKYKQDGSIGVVDAPTSAH--AGSDYTRLSTA 628 (717) Q Consensus 561 ~~----gv~~SpaNk~L~gv~~l~~~l------t~~e~d~L~~~GI~~ir~~~g~G~~v~g~rTt~s--~ds~~~~I~vr 628 (717) ++ |+|+||+|++|.|+.++.+++ ++.|++.|+++||++|++++++|+++||+||+.. .++.|+|+++| T Consensus 296 ~~d~~~g~~~span~~~~gi~~~~~~~~~~~~~~~~~~~~L~~~gi~~i~~~~~~G~~~wG~rT~~~~~~~~~~~~~~vr 375 (477) T protein:vir:10 296 RVDLDKGYWWSSSNQQLVGVTGVERPLSAMIDDPQSDVNMLNEQGITTVFSSYGSGLRLWGNRTAAWPTVTHMRNFENVR 375 (477) T ss_pred HhhhcCCceeccCCceeccccccccccccccCCChhhHHHHhhCCceEEEEecCCcEEEEcccccCCCCCCcccceeehh Confidence 74 799999999999999988775 4578999999999999999999999999999953 46679999999 Q ss_pred hhHHHHHHHHHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHhCCceecceee---eecChhhhhCCEEEEEEEEEcccc Q lcl|Aclame:pro 629 RIVKEAVNAVREVADPFIGEPNDTGNRNALTAAVDKRLSKMIENKALLGFDFR---LVVTPQQELLGEGSIELSLEAPNE 705 (717) Q Consensus 629 R~~d~I~~~I~~~~~~~IgepN~~~~~~~i~~~I~~fL~~L~~~GaI~G~~~~---~~~t~~~i~~G~l~v~i~v~P~~p 705 (717) |++|+|+++|++.++|++||||++.+|.+|++.|+.||++||++|+|.||+++ ++|+++++.+|+++++|+++|++| T Consensus 376 R~~~~i~~~~~~~~~~~v~~~~~~~~~~~i~~~i~~~l~~l~~~g~l~g~~v~~~~~~nt~~~i~~G~~~~~i~~~p~~p 455 (477) T protein:vir:10 376 RTGDVINESLRYFSQQFVDAPIDQGLIDSLVESVNGFGRKLIGDGALLGFKAWFDPARNPKEELAAGHLLINYKYTVPPP 455 (477) T ss_pred hHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeEEEEecCCCCHHHhhCCeEEEEEEEEecCC Confidence 99999999999999999999999999999999999999999999999999874 368889999999999999999999 Q ss_pred ccEEEEEEEEeC Q lcl|Aclame:pro 706 LRRLTTIVSLSA 717 (717) Q Consensus 706 ~e~I~v~i~~ta 717 (717) +|||++++++.- T Consensus 456 ~e~i~~~~~~~~ 467 (477) T protein:vir:10 456 LERLTYETEITS 467 (477) T ss_pred cceEEEEEEEcc Confidence 999999999988 No 27 >protein:vir:102819 Length: 648 # NCBI annotation: tail sheath protein # Family: family:all:2449 # MgeID: mge:1610 # MgeName: YS40 # Cross-refs: genbank:acc:YP_874082;genbank:gi:118197689;genbank:GeneID:4496011 Probab=100.00 E-value=4.3e-59 Score=340.57 Aligned_cols=604 Identities=15% Similarity=0.118 Sum_probs=302.6 Q ss_pred CCcchhc-c----cCCceeEEEecCccccCcCCCCCcceeEEEEEeeccCCcccceecC-HHHHHHhhCCcccccCCcch Q lcl|Aclame:pro 1 MAGFDQY-Q----AIPGHNARFKDGNLNLKSDPNPRETESVVLLGTATDGPVMQPVRVT-PETAYNIFGKVAHENGVYNG 74 (717) Q Consensus 1 ~~~~~~~-~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~gp~~~~~~~~-~~~~~~~fg~~~~~~~~~~~ 74 (717) |+- ++| + --||||||+.|++. +++++.+|+++++||.|++||+++|++|+ +.+++++||. T Consensus 1 ma~-~~yf~~~~~~~PGVyvee~~sg~---~~i~gv~tsva~fvG~a~~Gp~~~p~~v~s~~~~~~~fgg---------- 66 (648) T protein:vir:10 1 MAI-SVYFDGKLIKQLGAYVKTDLSAV---KQINGVGTGIVALLGLAEGGETYKPYRLTSFAEAVSIFKG---------- 66 (648) T ss_pred Cee-eeeeCCCCccCCceEEEEecccc---ccccCCCCceEEEEEeeCCCCCceeEEecCHHHHHHHhcC---------- Confidence 653 455 3 46999999999999 89999999999999999999999999995 7788999993 Q ss_pred HHHHHHHHHHHHccCCcEEEEEEecCcceeeeeecccccccccccCCcccceeecCcccceee----ccCCcceeeeEEE Q lcl|Aclame:pro 75 ATLLPKFEELWAAGNRDIRLMRTTGVNAVSSLLGTSYSKNSKEVAEDKLGGAQARGNVAATFT----LPNGGIVEATFLL 150 (717) Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~ 150 (717) |.|.+|.++||.||+..||+||+.+.+..+ .........|..+|.|+--++ +.+|...+. T Consensus 67 g~l~~av~~~F~nGg~~~~~vRv~~~~~a~------------~~~~~~~~~a~~~g~~gn~i~~~v~~~~~~~~~~---- 130 (648) T protein:vir:10 67 GPLLEHIKAAFIGGAGEVVAVRIGNPTTAS------------VSIPVAQNTSDTSPANLNFVSYEASTRSNQIYVS---- 130 (648) T ss_pred ccHHHHHHHHHhCCCcEEEEEEcCCCcccc------------eecceeEEeecccCCCCCceEEEEEEcCCCcCce---- Confidence 457778888899999999999998654322 112233334666777763221 112222111 Q ss_pred eecceeecCceeEeccccceeeccccccchhheeecCCcccccccceeehhhhhhhhheeeeeeeEeecccccccccCcc Q lcl|Aclame:pro 151 KARGVIIPPNNYTLDVGTEEDMKAGTQPTFAQVLLNENVADMESEITVSYEFTYKDAQGETKTSEVLDNNTDKDGKPMIA 230 (717) Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~gelld~~ie~~~~p~~~ 230 (717) ..+++..+. ....|..+.......+..-+. ++..-.+. ++.++ ++.. T Consensus 131 ---------~~l~v~~~~-------~~~~~d~~v~~i~~~~~~y~g-----------t~~~~t~~-----v~~~~-~~~~ 177 (648) T protein:vir:10 131 ---------FDLDENFTS-------ANEADDTIIFTIYQKHPDFSV-----------TRETFTFP-----RKFTT-PTVL 177 (648) T ss_pred ---------eEEEEEecC-------CCcccceeEEEeccCCCcccc-----------cceecccc-----ccccc-cccc Confidence 111111100 000011110000000000000 00000000 00000 0000 Q ss_pred cCCceEEEEEeecc-ccceeeecCccccccchheeccceeEEEEecCccccceEEEEeecc----cccccccceEEEeec Q lcl|Aclame:pro 231 KGADVTIKLEHVAL-AGLKLYADGIEVVDAKAFTVAGDQLTIHSNSKMKLGASLEAQYAYN----LVEVIQPVIELESIF 305 (717) Q Consensus 231 ~~ag~i~a~r~~~a-~~a~~~~~g~~~~~s~~~g~~an~i~v~l~d~~~t~~~l~v~~a~~----~~~~~~d~i~l~a~~ 305 (717) ...+. .-++++.. -.+++...+. +.+... +.+...+ ....++...+. ..+..-....+++++ T Consensus 178 ~~~~~-~~~~~~~~~v~~~~~~~~~--~~~~~v----~~~~~~~------~~~~~~~~~~~s~~~~~d~~~~~~~~~a~~ 244 (648) T protein:vir:10 178 VKRGS-TLFFVDRSIVNAALAAGPA--FQTALI----NLLKEQL------QPTDVVQIFDASDTNPVDIPLGLFVYEVLY 244 (648) T ss_pred ccccc-ceeecCccchhhhhccCcc--chhhhh----hchhhhh------hhhhhheecccccccccccccccccccccc Confidence 00000 00011100 0001111111 000000 0000000 00000000000 000000011122222 Q ss_pred cccccceEEEEEecCCceEEEEEeeeccCccce--eeeeeeeccccchhHHHHHHHhhcCccceeEEeeecccccccccc Q lcl|Aclame:pro 306 GGGVYNDIMRKVESKDGAVTVTITKPESKRGMI--SEDPLVFKSGDYTNFKMLVDAINNHPFNNVVRARTKPEFEATFTS 383 (717) Q Consensus 306 ~G~~GN~i~I~v~~~~~~~t~~lt~~~~~~~~~--~~~~~~l~~g~~~~~~~lv~~IN~~~~~~~~~a~~~~~~~~~l~s 383 (717) ++..+..-..-++...+... ........+ ...+ .+...++. ...+-.++.+...............++ T Consensus 245 ~~~~~~~~~~~~~~~~gd~~----~~~~~~~~~~~~~tp-~~~~~~~~-----~~~~~~~~~~~~~v~~~~~~~l~~~~~ 314 (648) T protein:vir:10 245 GGLFGFTKSRLVKTSFGTVD----DLLSNPLLFNLSATP-FFDGSDYQ-----DYTSLSDPANWFAKDAYTINHLVDTTI 314 (648) T ss_pred hhhhcCCcchhhhhhhcccc----ccccccceecccccc-ccccccee-----eeeccccccceeeeeccchhhcccccc Confidence 22111100000000000000 000000000 0000 00000000 001111111111100000000000000 Q ss_pred ccch--hhhhhccCCccCcccchhhhhhhcccccccccchhhhhhhhccccccceeEEeccccCCcc----cccccchhH Q lcl|Aclame:pro 384 TLQA--AADAKFSGGKDELSLDKEEMYKRLGGEKNEEGFVTKQGAYQYLENYEVDYVIPLGVHADTK----LIGKYDDFA 457 (717) Q Consensus 384 ~~~~--~~~~~ltgG~dG~~~~a~e~~~al~~~~~~~~~v~~~~~~~~le~~~vd~vi~~~~~a~t~----~~~~~~~~~ 457 (717) .... ..-..|.||.||..+... ++....... -.++..+..+++++...++|........ .......++ T Consensus 315 ~p~~~~~~~t~L~GGtdG~~p~s~-~~~~~~~~~-----~d~~d~l~~~~~~~~~~ivp~~~~~~~~~~~~~lt~~q~i~ 388 (648) T protein:vir:10 315 NPHILATRIFSLSGGTNGDDGTGY-YQTAVSNYI-----NIWSQGLATLEEEEVNFVIPAYKFTNVTQLNDRLTIFKGIA 388 (648) T ss_pred cCcccccccceecccccCCCcccc-cccccccch-----hhHHHHhhhccCCCceEEEeecccccccccccccCCccchH Confidence 0000 011248899999877442 111111111 1234456667788777777754222211 112223456 Q ss_pred HHHHHHHHHHhhccc--c---eeEEecCCCcchhhHHHHHHHHHHHHhhhhhhhhcccccccccchhhhhccccceeEEE Q lcl|Aclame:pro 458 YQLALACAVMSHYNS--V---TIGIIPTTTPSDISLAGVEEHVKKLENYANEFYMRDRFGNIIFDADRNKIDLGQFIEVV 532 (717) Q Consensus 458 ~~~a~~~~~~s~~~~--~---~i~ii~~~~~~~~~~a~v~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~v~ 532 (717) ..+..|+..|+...+ . ..++++..+.... ...|+.... ..+... .......++ ..++... T Consensus 389 a~a~shv~~~s~~~~~~~r~~~~~~vg~~~~es~--~~se~~~~~-~~~~~~-------~a~~~~~d~-----~~~~~~~ 453 (648) T protein:vir:10 389 STFLSHVQTMSQVNRRKARVGVFGLPAPSPNESV--TASEYLYNR-NILNTI-------SAMFGGTDR-----AQAVVFP 453 (648) T ss_pred HHHHHHHHHhhhccccccccCeEEEeCCCCchhH--HHHHHHhhh-hccccc-------ceeeeecCC-----ceEEeec Confidence 777788888876553 1 2333333222111 111111111 011110 000000001 1111111 Q ss_pred eCcEEEEecccCcceeech---hHHHHHHHhcCCcccccCCceeccccccc--ccCCHHHHHHHHhCCcEEEEEEcCc-- Q lcl|Aclame:pro 533 AGPDFIVRNTRLGQMASTP---DASYIGMVSQLKTQSAPTNKPLPSVTALR--YTYSANQLNRLTKARFATFKYKQDG-- 605 (717) Q Consensus 533 ~p~~~v~~~~~~~~~~~p~---ag~vAGl~A~~gv~~SpaNk~L~gv~~l~--~~lt~~e~d~L~~~GI~~ir~~~g~-- 605 (717) +.+.. .+........|| ++++||+++++++++||+||+|+++ +++ .+++++|+++|+++||+||++.+++ T Consensus 454 ~~~~~--~~~~G~~~~~p~~~~Aa~VAGl~a~l~~~~s~T~k~i~~~-~id~~~~~t~~qld~L~~~Gv~~ie~~~~~~~ 530 (648) T protein:vir:10 454 FYSNV--FNDEGKVELLGGEFFASYVAGMHANREPQDSITFLPISGI-GAEPLYNWTYTQKDDLISNRVLFVEKVKTSFG 530 (648) T ss_pred cccee--ECCCCcEEecchhhHHHHHHhhhhccccccCcccceeecc-ccccccCCCHHHHHHHhcCCcEEEEEecCCcc Confidence 11111 122222344566 7899999999999999999999844 454 5899999999999999999998775 Q ss_pred --eEEEEeceecCC--CCccceeeehhhhHHHHHHHHHH-HHHHhccccCCHHHHHHHHHHHHHHHHHHHhCCceeccee Q lcl|Aclame:pro 606 --SIGVVDAPTSAH--AGSDYTRLSTARIVKEAVNAVRE-VADPFIGEPNDTGNRNALTAAVDKRLSKMIENKALLGFDF 680 (717) Q Consensus 606 --G~~v~g~rTt~s--~ds~~~~I~vrR~~d~I~~~I~~-~~~~~IgepN~~~~~~~i~~~I~~fL~~L~~~GaI~G~~~ 680 (717) ++|+..+.|+.. +++.|++|+++|+.|++.+.|++ ..++|||+||++..|..++..|..||.++++.++|.+|+. T Consensus 531 ~~~~rvv~gITT~~~~~~~~~~eisv~ri~D~l~~~vr~~l~~~fIG~~n~~~~~~~ik~~i~~~L~~~~~~~~I~~y~~ 610 (648) T protein:vir:10 531 GIVYRIHHNPTTWLGPVTQGFQEFVLRRIDDFLQSYVYKNLQEQFIGRKSYGRKTENDIKVYTEALLSNLVGKQIVAYKD 610 (648) T ss_pred eeeEEEeccceeecCCCCcceeeeeeeehhhHHHHHHHHHHhhhcCcccccHHHHHHHHHHHHHHHhhHhhcCcccCccc Confidence 688999999864 56779999999999999999987 5569999999999999999999999999999999999973 Q ss_pred -eeecChhhhhCCEEEEEEEEEccccccEEEEEEEEeC Q lcl|Aclame:pro 681 -RLVVTPQQELLGEGSIELSLEAPNELRRLTTIVSLSA 717 (717) Q Consensus 681 -~~~~t~~~i~~G~l~v~i~v~P~~p~e~I~v~i~~ta 717 (717) ++. .+...++++|++.++|++|++||+++++++= T Consensus 611 ~~v~---~~~~~~vv~V~~~v~Pv~~i~~I~vti~it~ 645 (648) T protein:vir:10 611 VKVT---SNEDKTVYYVEFFYQPVTEIKFILVTMKVTF 645 (648) T ss_pred ceEE---EEecCCEEEEEEEEEecceeeEEEEEEEEEe Confidence 322 2234589999999999999999999999999 No 28 >protein:vir:6079 Length: 396 # NCBI annotation: gpFI # Family: family:all:115 # MgeID: mge:126 # MgeName: WPhi # Cross-refs: genbank:acc:NP_878220;genbank:gi:33438919;genbank:GeneID:1457754 Probab=100.00 E-value=7.1e-57 Score=328.41 Aligned_cols=364 Identities=15% Similarity=0.126 Sum_probs=257.4 Q ss_pred CCcchhcccCCceeEEEecCccccCcCCCCCcceeEEEEEeeccC-----CcccceecC-HHHHHHhhCCcccccCCcch Q lcl|Aclame:pro 1 MAGFDQYQAIPGHNARFKDGNLNLKSDPNPRETESVVLLGTATDG-----PVMQPVRVT-PETAYNIFGKVAHENGVYNG 74 (717) Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g-----p~~~~~~~~-~~~~~~~fg~~~~~~~~~~~ 74 (717) |+.| +|||+|++.+.+. .++..++|.+.+++|++.+. |+.+|++|+ .++++.-||.. T Consensus 1 m~~~-----~~Gv~v~e~~~~~---~~v~~~~tav~~fvGta~~~~~~~~p~~~p~~v~s~~~~~~~~g~~--------- 63 (396) T protein:vir:60 1 MSDY-----HHGVQVLEINEGT---RVISTVSTAIVGMVCTASDADAEIFPLNKPVLITNVQSAIAKAGKK--------- 63 (396) T ss_pred CCCC-----CCCeEEEEcCCCc---ccccccCceeEEEEecccccccccccCccCeEeechHHHHHhhcCc--------- Confidence 8875 5999999999999 89999999999999999664 999999994 66677779952 Q ss_pred HHHHHHHHHHHHccCCcEEEEEEecCcceeeeeecccccccccccCCcccceeecCcccceeeccCCcceeeeEEEeecc Q lcl|Aclame:pro 75 ATLLPKFEELWAAGNRDIRLMRTTGVNAVSSLLGTSYSKNSKEVAEDKLGGAQARGNVAATFTLPNGGIVEATFLLKARG 154 (717) Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (717) ++|.++...++.+|+..++++|+.+.. ... . ++..+ T Consensus 64 ~tl~~a~~~~~~~gg~~~~vv~~~~~~------------~~~-----~------~~~~~--------------------- 99 (396) T protein:vir:60 64 GTLAASLQAIADQSKPVTVVVRVEDGT------------GED-----E------ETKLA--------------------- 99 (396) T ss_pred chhHHHHHHHhhccCceEEEEeccccc------------ccc-----c------ccccc--------------------- Confidence 456666666689999999998877320 000 0 00000 Q ss_pred eeecCceeEeccccceeeccccccchhheeecCCcccccccceeehhhhhhhhheeeeeeeEeecccccccccCcccCCc Q lcl|Aclame:pro 155 VIIPPNNYTLDVGTEEDMKAGTQPTFAQVLLNENVADMESEITVSYEFTYKDAQGETKTSEVLDNNTDKDGKPMIAKGAD 234 (717) Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~gelld~~ie~~~~p~~~~~ag 234 (717) .+. ..+. T Consensus 100 -------~~~------------------------------------------------------~~~~------------ 106 (396) T protein:vir:60 100 -------QTV------------------------------------------------------SNII------------ 106 (396) T ss_pred -------ccc------------------------------------------------------cccc------------ Confidence 000 0000 Q ss_pred eEEEEEeeccccceeeecCccccccchheeccceeEEEEecCccccceEEEEeecccccccccceEEEeeccccccceEE Q lcl|Aclame:pro 235 VTIKLEHVALAGLKLYADGIEVVDAKAFTVAGDQLTIHSNSKMKLGASLEAQYAYNLVEVIQPVIELESIFGGGVYNDIM 314 (717) Q Consensus 235 ~i~a~r~~~a~~a~~~~~g~~~~~s~~~g~~an~i~v~l~d~~~t~~~l~v~~a~~~~~~~~d~i~l~a~~~G~~GN~i~ 314 (717) ++. |.+ + . T Consensus 107 -----------------~~~--------------------d~~--~-------~-------------------------- 114 (396) T protein:vir:60 107 -----------------GTT--------------------DEN--G-------Q-------------------------- 114 (396) T ss_pred -----------------ccc--------------------ccc--c-------c-------------------------- Confidence 000 000 0 0 Q ss_pred EEEecCCceEEEEEeeeccCccceeeeeeeeccccchhHHHHHHHhhcCccceeEEeeeccccccccccccchhhhhhcc Q lcl|Aclame:pro 315 RKVESKDGAVTVTITKPESKRGMISEDPLVFKSGDYTNFKMLVDAINNHPFNNVVRARTKPEFEATFTSTLQAAADAKFS 394 (717) Q Consensus 315 I~v~~~~~~~t~~lt~~~~~~~~~~~~~~~l~~g~~~~~~~lv~~IN~~~~~~~~~a~~~~~~~~~l~s~~~~~~~~~lt 394 (717) .+|- ..|. +.. .. . T Consensus 115 -------------------------------~tg~----~al~-~~~---------~~-------~-------------- 128 (396) T protein:vir:60 115 -------------------------------YTGL----KALL-AAE---------SV-------T-------------- 128 (396) T ss_pred -------------------------------ccch----hhhh-hcc---------cc-------e-------------- Confidence 0000 0000 000 00 0 Q ss_pred CCccCcccchhhhhhhcccccccccchhhhhhhhccccccceeEEeccccCCcccccccchhHHHHHHHHHHHhhcccce Q lcl|Aclame:pro 395 GGKDELSLDKEEMYKRLGGEKNEEGFVTKQGAYQYLENYEVDYVIPLGVHADTKLIGKYDDFAYQLALACAVMSHYNSVT 474 (717) Q Consensus 395 gG~dG~~~~a~e~~~al~~~~~~~~~v~~~~~~~~le~~~vd~vi~~~~~a~t~~~~~~~~~~~~~a~~~~~~s~~~~~~ 474 (717) + .. ..++. ++.. ....+...+..+|..+ .. T Consensus 129 ----~---~~------------------------------~~il~-----ap~~---~~~~v~~al~~~~~~~-----~~ 158 (396) T protein:vir:60 129 ----G---VK------------------------------PRILG-----VPGL---DTKEVAVALASVCQKL-----RA 158 (396) T ss_pred ----e---ee------------------------------eeecc-----cccc---ccHHHHHHHHHHhccC-----Ce Confidence 0 00 00000 0000 0011233444555432 23 Q ss_pred eEEecCCCcchhhHHHHHHHHHHHHhhhhhhhhcccccccccchhhhhccccceeEEEeCcEEEEecccCcceeechhHH Q lcl|Aclame:pro 475 IGIIPTTTPSDISLAGVEEHVKKLENYANEFYMRDRFGNIIFDADRNKIDLGQFIEVVAGPDFIVRNTRLGQMASTPDAS 554 (717) Q Consensus 475 i~ii~~~~~~~~~~a~v~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~v~~p~~~v~~~~~~~~~~~p~ag~ 554 (717) +.++...... ..+.+.++.+ . ..+.+..+++||++++++...+.+++|||++ T Consensus 159 ~~i~d~p~~~--~~~~a~~~~~---~-----------------------~~s~~~~~~~p~~~~~d~~~~~~~~~p~s~~ 210 (396) T protein:vir:60 159 FGYISAWGCK--TISEVKAYRQ---N-----------------------FSQRELMVIWPDFLAWDTVASTTATAYATAR 210 (396) T ss_pred EEEEeCCCCC--CHHHHHHHHh---h-----------------------cCCceEEEEeCceeeecccCCceeEEchhHH Confidence 3343332211 1112211111 0 1245788999999999999889999999999 Q ss_pred HHHHHhcC----CcccccCCceecccccccccC------CHHHHHHHHhCCcEEEEEEcCceEEEEeceecCCCCcccee Q lcl|Aclame:pro 555 YIGMVSQL----KTQSAPTNKPLPSVTALRYTY------SANQLNRLTKARFATFKYKQDGSIGVVDAPTSAHAGSDYTR 624 (717) Q Consensus 555 vAGl~A~~----gv~~SpaNk~L~gv~~l~~~l------t~~e~d~L~~~GI~~ir~~~g~G~~v~g~rTt~s~ds~~~~ 624 (717) +||++|++ |+|+||+|++|.|+.++.+++ +..|++.||++||+++ ++++|+++||+||++ .|++|+| T Consensus 211 ~AG~~a~~d~~~g~~~spaN~~l~gi~~~~~~~~~~~~~~~~~~~~Ln~~gI~~~--~~~~G~~~wG~rT~~-~d~~~~~ 287 (396) T protein:vir:60 211 ALGLRAKIDQEQGWHKTLSNVGVNGVTGISASVFWDLQESGTDADLLNESGVTTL--IRRDGFRFWGNRTCS-DDPLFLF 287 (396) T ss_pred HHHHHHHhhhccCcEeCcCCceecceeeceeecccccCCCcchhhhhhhcCcEEE--EcCCCEEEEcccccC-CCcccce Confidence 99999974 799999999999999987765 5678999999999999 568899999999985 5889999 Q ss_pred eehhhhHHHHHHHHHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHhCCceecceee---eecChhhhhCCEEEEEEEEE Q lcl|Aclame:pro 625 LSTARIVKEAVNAVREVADPFIGEPNDTGNRNALTAAVDKRLSKMIENKALLGFDFR---LVVTPQQELLGEGSIELSLE 701 (717) Q Consensus 625 I~vrR~~d~I~~~I~~~~~~~IgepN~~~~~~~i~~~I~~fL~~L~~~GaI~G~~~~---~~~t~~~i~~G~l~v~i~v~ 701 (717) |++||++++|+++|++.++|++||||++.+|.+|+..|+.||++||++|+|.||+++ ++|+++++.+|+++++|+++ T Consensus 288 i~~rR~~~~i~~~i~~~~~~~v~e~n~~~~~~~i~~~i~~~l~~l~~~gal~g~~~~~d~~~nt~~~i~~G~~~~~i~~~ 367 (396) T protein:vir:60 288 ENYTRTAQVLADTMAEAHMWAVDKPITATLIRDIVDGINAKFRELKTNGYIVDATCWFSEESNDAETLKAGKLYIDYDYT 367 (396) T ss_pred eehhhHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCceeceEEEEecCCCCHHHhhCCEEEEEEEEE Confidence 999999999999999999999999999999999999999999999999999999863 46888999999999999999 Q ss_pred ccccccEEEEEEEEeC Q lcl|Aclame:pro 702 APNELRRLTTIVSLSA 717 (717) Q Consensus 702 P~~p~e~I~v~i~~ta 717 (717) |++|+|||++++.+.. T Consensus 368 p~~pae~I~~~~~~~~ 383 (396) T protein:vir:60 368 PVPPLENLTLRQRITD 383 (396) T ss_pred ecCCcceEEEEEEEch Confidence 9999999999999998 No 29 >protein:vir:5711 Length: 396 # NCBI annotation: gpFI # Family: family:all:115 # MgeID: mge:120 # MgeName: L-413C # Cross-refs: genbank:acc:NP_839870;genbank:gi:30065725;genbank:GeneID:1260618 Probab=100.00 E-value=1.1e-56 Score=327.31 Aligned_cols=364 Identities=15% Similarity=0.119 Sum_probs=253.0 Q ss_pred CCcchhcccCCceeEEEecCccccCcCCCCCcceeEEEEEeeccC-----CcccceecC-HHHHHHhhCCcccccCCcch Q lcl|Aclame:pro 1 MAGFDQYQAIPGHNARFKDGNLNLKSDPNPRETESVVLLGTATDG-----PVMQPVRVT-PETAYNIFGKVAHENGVYNG 74 (717) Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g-----p~~~~~~~~-~~~~~~~fg~~~~~~~~~~~ 74 (717) |+.| +|||+|++.+.+. ..+..++|.+++++|++.++ |+.+|++|+ ..++..-||.. T Consensus 1 m~~~-----~~GV~v~e~~~g~---~~i~~v~tav~~~vg~a~~~d~~~~~~~~pv~i~s~~~~~~~~g~~--------- 63 (396) T protein:vir:57 1 MSDY-----HHGVQVLEINDGT---RVISTVSTAIVGMVCTASDADAETFPLNKPVLITNVQSAIAKAGKK--------- 63 (396) T ss_pred CCCC-----CCceEEEEcCCCc---ccccccCCceEEEEEeccCCCcccccCccCeEeecchhhhhhcccc--------- Confidence 8765 4999999999999 68999999999999999987 889999995 56667778853 Q ss_pred HHHHHHHHHHHHccCCcEEEEEEecCcceeeeeecccccccccccCCcccceeecCcccceeeccCCcceeeeEEEeecc Q lcl|Aclame:pro 75 ATLLPKFEELWAAGNRDIRLMRTTGVNAVSSLLGTSYSKNSKEVAEDKLGGAQARGNVAATFTLPNGGIVEATFLLKARG 154 (717) Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (717) ++|..+...++.+|+..++++|..+..... ..... +. T Consensus 64 ~tl~~al~~~~~~~~~~~~vv~~~~~~~~~------------~~~~~-----------a~-------------------- 100 (396) T protein:vir:57 64 GTLAASLQAIADQSKPVTVVVRVEDGTGDD------------EETKL-----------AQ-------------------- 100 (396) T ss_pred cchHHHHHHhhhcCCceeEeeecccccccc------------ccccc-----------cc-------------------- Confidence 344455555689999988888765221100 00000 00 Q ss_pred eeecCceeEeccccceeeccccccchhheeecCCcccccccceeehhhhhhhhheeeeeeeEeecccccccccCcccCCc Q lcl|Aclame:pro 155 VIIPPNNYTLDVGTEEDMKAGTQPTFAQVLLNENVADMESEITVSYEFTYKDAQGETKTSEVLDNNTDKDGKPMIAKGAD 234 (717) Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~gelld~~ie~~~~p~~~~~ag 234 (717) +.+. + . |. ++. ++ T Consensus 101 --------t~~~----------------i----------------------------i-G~-----~~~---------~~ 113 (396) T protein:vir:57 101 --------TVSN----------------I----------------------------I-GT-----TDE---------NG 113 (396) T ss_pred --------ccee----------------e----------------------------e-ee-----ccc---------cc Confidence 0000 0 0 00 000 00 Q ss_pred eEEEEEeeccccceeeecCccccccchheeccceeEEEEecCccccceEEEEeecccccccccceEEEeeccccccceEE Q lcl|Aclame:pro 235 VTIKLEHVALAGLKLYADGIEVVDAKAFTVAGDQLTIHSNSKMKLGASLEAQYAYNLVEVIQPVIELESIFGGGVYNDIM 314 (717) Q Consensus 235 ~i~a~r~~~a~~a~~~~~g~~~~~s~~~g~~an~i~v~l~d~~~t~~~l~v~~a~~~~~~~~d~i~l~a~~~G~~GN~i~ 314 (717) . ..|++. |.+. + + ++ T Consensus 114 ~---------------~tgl~a----------------l~~~----------~---------~------~~--------- 128 (396) T protein:vir:57 114 Q---------------YTGLKA----------------LMGA----------E---------S------VT--------- 128 (396) T ss_pred c---------------chhhhh----------------hhhc----------c---------c------ce--------- Confidence 0 000000 0000 0 0 00 Q ss_pred EEEecCCceEEEEEeeeccCccceeeeeeeeccccchhHHHHHHHhhcCccceeEEeeeccccccccccccchhhhhhcc Q lcl|Aclame:pro 315 RKVESKDGAVTVTITKPESKRGMISEDPLVFKSGDYTNFKMLVDAINNHPFNNVVRARTKPEFEATFTSTLQAAADAKFS 394 (717) Q Consensus 315 I~v~~~~~~~t~~lt~~~~~~~~~~~~~~~l~~g~~~~~~~lv~~IN~~~~~~~~~a~~~~~~~~~l~s~~~~~~~~~lt 394 (717) +.. |. T Consensus 129 ---------------------------------~~~-------------p~----------------------------- 133 (396) T protein:vir:57 129 ---------------------------------GVK-------------PR----------------------------- 133 (396) T ss_pred ---------------------------------eEE-------------ec----------------------------- Confidence 000 00 Q ss_pred CCccCcccchhhhhhhcccccccccchhhhhhhhccccccceeEEeccccCCcccccccchhHHHHHHHHHHHhhcccce Q lcl|Aclame:pro 395 GGKDELSLDKEEMYKRLGGEKNEEGFVTKQGAYQYLENYEVDYVIPLGVHADTKLIGKYDDFAYQLALACAVMSHYNSVT 474 (717) Q Consensus 395 gG~dG~~~~a~e~~~al~~~~~~~~~v~~~~~~~~le~~~vd~vi~~~~~a~t~~~~~~~~~~~~~a~~~~~~s~~~~~~ 474 (717) ++ ..+... ...+...+..+|..+ .. T Consensus 134 ------------------------------------------i~-----~ap~~~---~~~v~~al~~~~~~~-----~~ 158 (396) T protein:vir:57 134 ------------------------------------------IL-----GVPGLD---TKEVAVALASVCQEL-----NA 158 (396) T ss_pred ------------------------------------------cc-----cCcccc---hhHHHHHHHHHhhhC-----ce Confidence 00 000000 001122333444332 12 Q ss_pred eEEecCCCcchhhHHHHHHHHHHHHhhhhhhhhcccccccccchhhhhccccceeEEEeCcEEEEecccCcceeechhHH Q lcl|Aclame:pro 475 IGIIPTTTPSDISLAGVEEHVKKLENYANEFYMRDRFGNIIFDADRNKIDLGQFIEVVAGPDFIVRNTRLGQMASTPDAS 554 (717) Q Consensus 475 i~ii~~~~~~~~~~a~v~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~v~~p~~~v~~~~~~~~~~~p~ag~ 554 (717) +.++....... ...+.++.+ . ..+.+..+++||++++++...+.+++|||++ T Consensus 159 ~~~~d~p~~~~--~~~~~~~~~---~-----------------------~~s~~~~~~~p~~~~~d~~~~~~~~~p~s~~ 210 (396) T protein:vir:57 159 FGYISAWGCKT--ISEVKAYRQ---N-----------------------FSQRELMVIWPDFLAWDTVTSTTATAYATAR 210 (396) T ss_pred EEEEcCCCCCC--HHHHHHHHh---c-----------------------cCCceEEEEcceeeeecccCCceeEEehhHH Confidence 33332221111 111211111 0 1245678999999999998888999999999 Q ss_pred HHHHHhcC----CcccccCCceecccccccccC------CHHHHHHHHhCCcEEEEEEcCceEEEEeceecCCCCcccee Q lcl|Aclame:pro 555 YIGMVSQL----KTQSAPTNKPLPSVTALRYTY------SANQLNRLTKARFATFKYKQDGSIGVVDAPTSAHAGSDYTR 624 (717) Q Consensus 555 vAGl~A~~----gv~~SpaNk~L~gv~~l~~~l------t~~e~d~L~~~GI~~ir~~~g~G~~v~g~rTt~s~ds~~~~ 624 (717) +||++|++ |+|+||+|++|.|+.++.+.+ ++.|++.||++||+++ ++++|+++||+||++ .|+.|+| T Consensus 211 ~Ag~~a~~d~~~g~~~spaN~~l~gi~~~~~~~~~~~~~~~~~~~~Ln~~gi~t~--~~~~G~~~wG~rT~~-~d~~~~~ 287 (396) T protein:vir:57 211 ALGLRAKIDQEQGWHKTLSNVGVNGVTGISASVFWDLQKPGTDADLLNEAGVTTL--VRRDGFRFWGNRTCS-DDPLFLF 287 (396) T ss_pred HHHHHHHhhhccCcEeccCCceeccccccceecccccCCcchhhhhhhhcCcEEE--EcCCCEEEEcccccC-CCcccce Confidence 99999974 799999999999999988775 4678999999999999 457899999999985 5889999 Q ss_pred eehhhhHHHHHHHHHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHhCCceecceee---eecChhhhhCCEEEEEEEEE Q lcl|Aclame:pro 625 LSTARIVKEAVNAVREVADPFIGEPNDTGNRNALTAAVDKRLSKMIENKALLGFDFR---LVVTPQQELLGEGSIELSLE 701 (717) Q Consensus 625 I~vrR~~d~I~~~I~~~~~~~IgepN~~~~~~~i~~~I~~fL~~L~~~GaI~G~~~~---~~~t~~~i~~G~l~v~i~v~ 701 (717) |++||++|+|+++|++.++|++||||++.+|.+|++.|+.||++||++|+|.||+++ .+|+++++.+|+++++|+++ T Consensus 288 i~vrR~~~~i~~~i~~~~~~~v~e~n~~~~~~~i~~~i~~~l~~l~~~gal~g~~v~~d~~~n~~~~i~~G~~~~~v~~~ 367 (396) T protein:vir:57 288 ESYTRTAQVLADTMAEAHMWAIDKPITATLIRDIIDGINAKFRELKNNGYIVDGTCWFSEESNDAETLKAGKLYIDYDYT 367 (396) T ss_pred eehhhHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCceeceEEEEecCCCCHHHhhCCeEEEEEEEE Confidence 999999999999999999999999999999999999999999999999999999863 35888999999999999999 Q ss_pred ccccccEEEEEEEEeC Q lcl|Aclame:pro 702 APNELRRLTTIVSLSA 717 (717) Q Consensus 702 P~~p~e~I~v~i~~ta 717 (717) |++|+|||++++.++. T Consensus 368 p~~p~e~I~~~~~~~~ 383 (396) T protein:vir:57 368 PVPPLENLTLRQRITS 383 (396) T ss_pred ecCCcceEEEEEEEch Confidence 9999999999999999 No 30 >protein:vir:78206 Length: 390 # NCBI annotation: gp33, phage tail sheath protein # Family: family:all:115 # MgeID: mge:1848 # MgeName: phiE12-2 # Cross-refs: genbank:acc:YP_001111183;genbank:gi:134288694;genbank:GeneID:4960666 Probab=100.00 E-value=3.3e-57 Score=330.26 Aligned_cols=359 Identities=15% Similarity=0.124 Sum_probs=251.9 Q ss_pred CCcchhcccCCceeEEEecCccccCcCCCCCcceeEEEEEeeccC-----CcccceecCH-HHHHHhhCCcccccCCcch Q lcl|Aclame:pro 1 MAGFDQYQAIPGHNARFKDGNLNLKSDPNPRETESVVLLGTATDG-----PVMQPVRVTP-ETAYNIFGKVAHENGVYNG 74 (717) Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g-----p~~~~~~~~~-~~~~~~fg~~~~~~~~~~~ 74 (717) |+. +| +||++|++.+.+. .++..++|.+++++|++.++ |+.+||+++. .++..-||. . T Consensus 1 M~~--~~--~~Gv~v~e~~~g~---~~i~~~~tav~g~vg~a~~ad~~~~pln~pv~i~s~~~~~~~~g~---------~ 64 (390) T protein:vir:78 1 MPQ--DY--HHGVRVIEINEGG---RPIRSVSTAVLGVVCTAADADASAFPLNTPVLLTNVVAALGKAGK---------K 64 (390) T ss_pred Ccc--cc--cCCeEEEEcCCCc---ccccccCcceeEEEEcccCcCccccccccceEeccHHHHHhhcCC---------C Confidence 874 44 7999999999999 89999999999999999887 9999999964 444556884 3 Q ss_pred HHHHHHHHHHHHccCCcEEEEEEecCcceeeeeecccccccccccCCcccceeecCcccceeeccCCcceeeeEEEeecc Q lcl|Aclame:pro 75 ATLLPKFEELWAAGNRDIRLMRTTGVNAVSSLLGTSYSKNSKEVAEDKLGGAQARGNVAATFTLPNGGIVEATFLLKARG 154 (717) Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (717) ++|..+...+|.+|+..++++|+.+.. ..+...... +.+..+ + +.. T Consensus 65 gtL~~al~~~~~~gg~~~~vv~v~~~~------------~~~~~~~~~-----ig~~~~-~------~~~---------- 110 (390) T protein:vir:78 65 GTLRRTLDAIGKQTKPLTVVVRVAEGK------------DADETTSNV-----IGTVTP-D------GKY---------- 110 (390) T ss_pred ceehhhhhhhccccCceEEEEEecccc------------ccccccccc-----cccccc-c------ccc---------- Confidence 677777777799999999999987321 000000000 000000 0 000 Q ss_pred eeecCceeEeccccceeeccccccchhheeecCCcccccccceeehhhhhhhhheeeeeeeEeecccccccccCcccCCc Q lcl|Aclame:pro 155 VIIPPNNYTLDVGTEEDMKAGTQPTFAQVLLNENVADMESEITVSYEFTYKDAQGETKTSEVLDNNTDKDGKPMIAKGAD 234 (717) Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~gelld~~ie~~~~p~~~~~ag 234 (717) + + -++|.. ++. T Consensus 111 --------t------------------------g-------------------------~~al~~-~~~----------- 121 (390) T protein:vir:78 111 --------T------------------------G-------------------------IKALLA-AQG----------- 121 (390) T ss_pred --------c------------------------h-------------------------hhhhhh-hhh----------- Confidence 0 0 000000 000 Q ss_pred eEEEEEeeccccceeeecCccccccchheeccceeEEEEecCccccceEEEEeecccccccccceEEEeeccccccceEE Q lcl|Aclame:pro 235 VTIKLEHVALAGLKLYADGIEVVDAKAFTVAGDQLTIHSNSKMKLGASLEAQYAYNLVEVIQPVIELESIFGGGVYNDIM 314 (717) Q Consensus 235 ~i~a~r~~~a~~a~~~~~g~~~~~s~~~g~~an~i~v~l~d~~~t~~~l~v~~a~~~~~~~~d~i~l~a~~~G~~GN~i~ 314 (717) . ++...+ T Consensus 122 -------------------~-------~~~~p~----------------------------------------------- 128 (390) T protein:vir:78 122 -------------------A-------LGVKPR----------------------------------------------- 128 (390) T ss_pred -------------------h-------hcceeh----------------------------------------------- Confidence 0 000000 Q ss_pred EEEecCCceEEEEEeeeccCccceeeeeeeeccccchhHHHHHHHhhcCccceeEEeeeccccccccccccchhhhhhcc Q lcl|Aclame:pro 315 RKVESKDGAVTVTITKPESKRGMISEDPLVFKSGDYTNFKMLVDAINNHPFNNVVRARTKPEFEATFTSTLQAAADAKFS 394 (717) Q Consensus 315 I~v~~~~~~~t~~lt~~~~~~~~~~~~~~~l~~g~~~~~~~lv~~IN~~~~~~~~~a~~~~~~~~~l~s~~~~~~~~~lt 394 (717) . +. .| T Consensus 129 ----------------------i------------------l~-----ap------------------------------ 133 (390) T protein:vir:78 129 ----------------------I------------------LA-----AP------------------------------ 133 (390) T ss_pred ----------------------h------------------hc-----cc------------------------------ Confidence 0 00 00 Q ss_pred CCccCcccchhhhhhhcccccccccchhhhhhhhccccccceeEEeccccCCcccccccchhHHHHHHHHHHHhhcccce Q lcl|Aclame:pro 395 GGKDELSLDKEEMYKRLGGEKNEEGFVTKQGAYQYLENYEVDYVIPLGVHADTKLIGKYDDFAYQLALACAVMSHYNSVT 474 (717) Q Consensus 395 gG~dG~~~~a~e~~~al~~~~~~~~~v~~~~~~~~le~~~vd~vi~~~~~a~t~~~~~~~~~~~~~a~~~~~~s~~~~~~ 474 (717) |.+ .. .+...+..+|..+ .. T Consensus 134 -~~~-----~~-------------------------------------------------~v~~~l~~~a~~~-----~~ 153 (390) T protein:vir:78 134 -GLD-----TQ-------------------------------------------------PVAAALAATAQSL-----RA 153 (390) T ss_pred -ccc-----hH-------------------------------------------------HHHHHHHHhhccc-----ce Confidence 000 00 0001111111111 01 Q ss_pred eEEecCCCcchhhHHHHHHHHHHHHhhhhhhhhcccccccccchhhhhccccceeEEEeCcEEEEecccCcceeechhHH Q lcl|Aclame:pro 475 IGIIPTTTPSDISLAGVEEHVKKLENYANEFYMRDRFGNIIFDADRNKIDLGQFIEVVAGPDFIVRNTRLGQMASTPDAS 554 (717) Q Consensus 475 i~ii~~~~~~~~~~a~v~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~v~~p~~~v~~~~~~~~~~~p~ag~ 554 (717) +.++.... .. ....+..+.+ ...+.+..++|||+.++++.....+++|||++ T Consensus 154 ~aivD~p~-~~-t~~~a~~~~~--------------------------~~~s~~~~~~~p~~~~~d~~~~~~~~~p~s~~ 205 (390) T protein:vir:78 154 MAYVSASG-CK-TKEEAAAYRK--------------------------QFGQREIMVIWPDWLGWDDTTNSTAVIPAPAI 205 (390) T ss_pred EEEEecCC-CC-CHHHHHHHhh--------------------------ccCCceEEEEcCceEeecccCCcccccchHHH Confidence 12221111 11 1111111100 01245678999999999998888999999999 Q ss_pred HHHHHhcC----CcccccCCceecccccccccCCHHH------HHHHHhCCcEEEEEEcCceEEEEeceecCCCCcccee Q lcl|Aclame:pro 555 YIGMVSQL----KTQSAPTNKPLPSVTALRYTYSANQ------LNRLTKARFATFKYKQDGSIGVVDAPTSAHAGSDYTR 624 (717) Q Consensus 555 vAGl~A~~----gv~~SpaNk~L~gv~~l~~~lt~~e------~d~L~~~GI~~ir~~~g~G~~v~g~rTt~s~ds~~~~ 624 (717) +||+++++ |+|+||+|+.|.|+.++.++++..+ .+.||++||+++ ++++|+++||+||++ .|+.|+| T Consensus 206 ~Agl~a~~D~~~g~~~spaN~~l~gi~~~~~~~~~~~~~~~~~~~~ln~~gi~t~--~~~~G~~~wG~rT~s-~d~~~~~ 282 (390) T protein:vir:78 206 AAGLRAKIDNDIGWHKTISNVVVNGVSGISADVSWDLQDPATDAGYLNEHEVTTL--VNRNGFRFWGERTCS-DDPKFAF 282 (390) T ss_pred HHHHHHHhhcCCCcEECcCCceeeceeecceecccccccccchhhhhhhcCcEEE--EcCCCEEEEcccccC-CCcccce Confidence 99999974 7999999999999999988876544 468999999998 557899999999984 5899999 Q ss_pred eehhhhHHHHHHHHHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHhCCceecceee---eecChhhhhCCEEEEEEEEE Q lcl|Aclame:pro 625 LSTARIVKEAVNAVREVADPFIGEPNDTGNRNALTAAVDKRLSKMIENKALLGFDFR---LVVTPQQELLGEGSIELSLE 701 (717) Q Consensus 625 I~vrR~~d~I~~~I~~~~~~~IgepN~~~~~~~i~~~I~~fL~~L~~~GaI~G~~~~---~~~t~~~i~~G~l~v~i~v~ 701 (717) |++||++|+|+++|++.++|++||||++.+|.+|++.|+.||++||++|+|.||+++ ++|+++++.+|+++++|+++ T Consensus 283 i~~rR~~~~i~~~i~~~~~~~v~e~n~~~~~~~i~~~i~~~L~~l~~~g~l~g~~v~~d~~~nt~~~i~~G~~~~~v~~~ 362 (390) T protein:vir:78 283 ENYTRTAQVAGDSIAEAQMPVVDGPLNPSLARDIVESINGWFRQQVANGYLIGGSAWIDPEPNTADILASGKAYIDYDYT 362 (390) T ss_pred eehhhHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeEEEEccCCCCHHHhhCCeEEEEEEEE Confidence 999999999999999999999999999999999999999999999999999999863 36888999999999999999 Q ss_pred ccccccEEEEEEEEeC Q lcl|Aclame:pro 702 APNELRRLTTIVSLSA 717 (717) Q Consensus 702 P~~p~e~I~v~i~~ta 717 (717) |++|+|||++++.++. T Consensus 363 p~~pae~I~~~~~~~~ 378 (390) T protein:vir:78 363 PVPPLENLVLRQRITD 378 (390) T ss_pred ecCCcceEEEEEEEch Confidence 9999999999999998 No 31 >protein:vir:103993 Length: 390 # NCBI annotation: phage tail sheath protein # Family: family:all:115 # MgeID: mge:1665 # MgeName: phi52237 # Cross-refs: genbank:acc:YP_293729;genbank:gi:72537699;genbank:GeneID:3608123 Probab=100.00 E-value=3.3e-57 Score=330.26 Aligned_cols=359 Identities=15% Similarity=0.124 Sum_probs=251.9 Q ss_pred CCcchhcccCCceeEEEecCccccCcCCCCCcceeEEEEEeeccC-----CcccceecCH-HHHHHhhCCcccccCCcch Q lcl|Aclame:pro 1 MAGFDQYQAIPGHNARFKDGNLNLKSDPNPRETESVVLLGTATDG-----PVMQPVRVTP-ETAYNIFGKVAHENGVYNG 74 (717) Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g-----p~~~~~~~~~-~~~~~~fg~~~~~~~~~~~ 74 (717) |+. +| +||++|++.+.+. .++..++|.+++++|++.++ |+.+||+++. .++..-||. . T Consensus 1 M~~--~~--~~Gv~v~e~~~g~---~~i~~~~tav~g~vg~a~~ad~~~~pln~pv~i~s~~~~~~~~g~---------~ 64 (390) T protein:vir:10 1 MPQ--DY--HHGVRVIEINEGG---RPIRSVSTAVLGVVCTAADADASAFPLNTPVLLTNVVAALGKAGK---------K 64 (390) T ss_pred Ccc--cc--cCCeEEEEcCCCc---ccccccCcceeEEEEcccCcCccccccccceEeccHHHHHhhcCC---------C Confidence 874 44 7999999999999 89999999999999999887 9999999964 444556884 3 Q ss_pred HHHHHHHHHHHHccCCcEEEEEEecCcceeeeeecccccccccccCCcccceeecCcccceeeccCCcceeeeEEEeecc Q lcl|Aclame:pro 75 ATLLPKFEELWAAGNRDIRLMRTTGVNAVSSLLGTSYSKNSKEVAEDKLGGAQARGNVAATFTLPNGGIVEATFLLKARG 154 (717) Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (717) ++|..+...+|.+|+..++++|+.+.. ..+...... +.+..+ + +.. T Consensus 65 gtL~~al~~~~~~gg~~~~vv~v~~~~------------~~~~~~~~~-----ig~~~~-~------~~~---------- 110 (390) T protein:vir:10 65 GTLRRTLDAIGKQTKPLTVVVRVAEGK------------DADETTSNV-----IGTVTP-D------GKY---------- 110 (390) T ss_pred ceehhhhhhhccccCceEEEEEecccc------------ccccccccc-----cccccc-c------ccc---------- Confidence 677777777799999999999987321 000000000 000000 0 000 Q ss_pred eeecCceeEeccccceeeccccccchhheeecCCcccccccceeehhhhhhhhheeeeeeeEeecccccccccCcccCCc Q lcl|Aclame:pro 155 VIIPPNNYTLDVGTEEDMKAGTQPTFAQVLLNENVADMESEITVSYEFTYKDAQGETKTSEVLDNNTDKDGKPMIAKGAD 234 (717) Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~gelld~~ie~~~~p~~~~~ag 234 (717) + + -++|.. ++. T Consensus 111 --------t------------------------g-------------------------~~al~~-~~~----------- 121 (390) T protein:vir:10 111 --------T------------------------G-------------------------IKALLA-AQG----------- 121 (390) T ss_pred --------c------------------------h-------------------------hhhhhh-hhh----------- Confidence 0 0 000000 000 Q ss_pred eEEEEEeeccccceeeecCccccccchheeccceeEEEEecCccccceEEEEeecccccccccceEEEeeccccccceEE Q lcl|Aclame:pro 235 VTIKLEHVALAGLKLYADGIEVVDAKAFTVAGDQLTIHSNSKMKLGASLEAQYAYNLVEVIQPVIELESIFGGGVYNDIM 314 (717) Q Consensus 235 ~i~a~r~~~a~~a~~~~~g~~~~~s~~~g~~an~i~v~l~d~~~t~~~l~v~~a~~~~~~~~d~i~l~a~~~G~~GN~i~ 314 (717) . ++...+ T Consensus 122 -------------------~-------~~~~p~----------------------------------------------- 128 (390) T protein:vir:10 122 -------------------A-------LGVKPR----------------------------------------------- 128 (390) T ss_pred -------------------h-------hcceeh----------------------------------------------- Confidence 0 000000 Q ss_pred EEEecCCceEEEEEeeeccCccceeeeeeeeccccchhHHHHHHHhhcCccceeEEeeeccccccccccccchhhhhhcc Q lcl|Aclame:pro 315 RKVESKDGAVTVTITKPESKRGMISEDPLVFKSGDYTNFKMLVDAINNHPFNNVVRARTKPEFEATFTSTLQAAADAKFS 394 (717) Q Consensus 315 I~v~~~~~~~t~~lt~~~~~~~~~~~~~~~l~~g~~~~~~~lv~~IN~~~~~~~~~a~~~~~~~~~l~s~~~~~~~~~lt 394 (717) . +. .| T Consensus 129 ----------------------i------------------l~-----ap------------------------------ 133 (390) T protein:vir:10 129 ----------------------I------------------LA-----AP------------------------------ 133 (390) T ss_pred ----------------------h------------------hc-----cc------------------------------ Confidence 0 00 00 Q ss_pred CCccCcccchhhhhhhcccccccccchhhhhhhhccccccceeEEeccccCCcccccccchhHHHHHHHHHHHhhcccce Q lcl|Aclame:pro 395 GGKDELSLDKEEMYKRLGGEKNEEGFVTKQGAYQYLENYEVDYVIPLGVHADTKLIGKYDDFAYQLALACAVMSHYNSVT 474 (717) Q Consensus 395 gG~dG~~~~a~e~~~al~~~~~~~~~v~~~~~~~~le~~~vd~vi~~~~~a~t~~~~~~~~~~~~~a~~~~~~s~~~~~~ 474 (717) |.+ .. .+...+..+|..+ .. T Consensus 134 -~~~-----~~-------------------------------------------------~v~~~l~~~a~~~-----~~ 153 (390) T protein:vir:10 134 -GLD-----TQ-------------------------------------------------PVAAALAATAQSL-----RA 153 (390) T ss_pred -ccc-----hH-------------------------------------------------HHHHHHHHhhccc-----ce Confidence 000 00 0001111111111 01 Q ss_pred eEEecCCCcchhhHHHHHHHHHHHHhhhhhhhhcccccccccchhhhhccccceeEEEeCcEEEEecccCcceeechhHH Q lcl|Aclame:pro 475 IGIIPTTTPSDISLAGVEEHVKKLENYANEFYMRDRFGNIIFDADRNKIDLGQFIEVVAGPDFIVRNTRLGQMASTPDAS 554 (717) Q Consensus 475 i~ii~~~~~~~~~~a~v~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~v~~p~~~v~~~~~~~~~~~p~ag~ 554 (717) +.++.... .. ....+..+.+ ...+.+..++|||+.++++.....+++|||++ T Consensus 154 ~aivD~p~-~~-t~~~a~~~~~--------------------------~~~s~~~~~~~p~~~~~d~~~~~~~~~p~s~~ 205 (390) T protein:vir:10 154 MAYVSASG-CK-TKEEAAAYRK--------------------------QFGQREIMVIWPDWLGWDDTTNSTAVIPAPAI 205 (390) T ss_pred EEEEecCC-CC-CHHHHHHHhh--------------------------ccCCceEEEEcCceEeecccCCcccccchHHH Confidence 12221111 11 1111111100 01245678999999999998888999999999 Q ss_pred HHHHHhcC----CcccccCCceecccccccccCCHHH------HHHHHhCCcEEEEEEcCceEEEEeceecCCCCcccee Q lcl|Aclame:pro 555 YIGMVSQL----KTQSAPTNKPLPSVTALRYTYSANQ------LNRLTKARFATFKYKQDGSIGVVDAPTSAHAGSDYTR 624 (717) Q Consensus 555 vAGl~A~~----gv~~SpaNk~L~gv~~l~~~lt~~e------~d~L~~~GI~~ir~~~g~G~~v~g~rTt~s~ds~~~~ 624 (717) +||+++++ |+|+||+|+.|.|+.++.++++..+ .+.||++||+++ ++++|+++||+||++ .|+.|+| T Consensus 206 ~Agl~a~~D~~~g~~~spaN~~l~gi~~~~~~~~~~~~~~~~~~~~ln~~gi~t~--~~~~G~~~wG~rT~s-~d~~~~~ 282 (390) T protein:vir:10 206 AAGLRAKIDNDIGWHKTISNVVVNGVSGISADVSWDLQDPATDAGYLNEHEVTTL--VNRNGFRFWGERTCS-DDPKFAF 282 (390) T ss_pred HHHHHHHhhcCCCcEECcCCceeeceeecceecccccccccchhhhhhhcCcEEE--EcCCCEEEEcccccC-CCcccce Confidence 99999974 7999999999999999988876544 468999999998 557899999999984 5899999 Q ss_pred eehhhhHHHHHHHHHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHhCCceecceee---eecChhhhhCCEEEEEEEEE Q lcl|Aclame:pro 625 LSTARIVKEAVNAVREVADPFIGEPNDTGNRNALTAAVDKRLSKMIENKALLGFDFR---LVVTPQQELLGEGSIELSLE 701 (717) Q Consensus 625 I~vrR~~d~I~~~I~~~~~~~IgepN~~~~~~~i~~~I~~fL~~L~~~GaI~G~~~~---~~~t~~~i~~G~l~v~i~v~ 701 (717) |++||++|+|+++|++.++|++||||++.+|.+|++.|+.||++||++|+|.||+++ ++|+++++.+|+++++|+++ T Consensus 283 i~~rR~~~~i~~~i~~~~~~~v~e~n~~~~~~~i~~~i~~~L~~l~~~g~l~g~~v~~d~~~nt~~~i~~G~~~~~v~~~ 362 (390) T protein:vir:10 283 ENYTRTAQVAGDSIAEAQMPVVDGPLNPSLARDIVESINGWFRQQVANGYLIGGSAWIDPEPNTADILASGKAYIDYDYT 362 (390) T ss_pred eehhhHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeEEEEccCCCCHHHhhCCeEEEEEEEE Confidence 999999999999999999999999999999999999999999999999999999863 36888999999999999999 Q ss_pred ccccccEEEEEEEEeC Q lcl|Aclame:pro 702 APNELRRLTTIVSLSA 717 (717) Q Consensus 702 P~~p~e~I~v~i~~ta 717 (717) |++|+|||++++.++. T Consensus 363 p~~pae~I~~~~~~~~ 378 (390) T protein:vir:10 363 PVPPLENLVLRQRITD 378 (390) T ss_pred ecCCcceEEEEEEEch Confidence 9999999999999998 No 32 >protein:vir:1845 Length: 392 # NCBI annotation: tail sheath protein FI # Family: family:all:115 # MgeID: mge:324 # MgeName: 186 # Cross-refs: genbank:acc:NP_052269;genbank:gi:9634076;genbank:GeneID:1262448 Probab=100.00 E-value=1.6e-56 Score=326.47 Aligned_cols=361 Identities=15% Similarity=0.121 Sum_probs=251.1 Q ss_pred CCcchhcccCCceeEEEecCccccCcCCCCCcceeEEEEEeeccC-----CcccceecC-HHHHHHhhCCcccccCCcch Q lcl|Aclame:pro 1 MAGFDQYQAIPGHNARFKDGNLNLKSDPNPRETESVVLLGTATDG-----PVMQPVRVT-PETAYNIFGKVAHENGVYNG 74 (717) Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g-----p~~~~~~~~-~~~~~~~fg~~~~~~~~~~~ 74 (717) |+.| +|||+++..+.+. .++...+|.+++++|+|.++ |+.+|++|+ ..++...||+. T Consensus 1 m~~~-----~~Gv~v~e~~~g~---~~i~~~~tav~g~vgta~~~~~~~~~~~~p~~its~~~~~~~~g~~--------- 63 (392) T protein:vir:18 1 MSDF-----HHGTKVIEINDGT---RVISTVATAIVGMVWTASDADAETFPLNEPVLITNVQSAIAKAGKK--------- 63 (392) T ss_pred CCCC-----CCCeEEEEcCCCc---eeeeccCcceeEEEEeccCCCCcccccccceEeechHHHHhhcCCC--------- Confidence 8765 5899999999999 78999999999999999887 999999995 66667779852 Q ss_pred HHHHHHHHHHHHccCCcEEEEEEecCcceeeeeecccccccccccCCcccceeecCcccceeeccCCcceeeeEEEeecc Q lcl|Aclame:pro 75 ATLLPKFEELWAAGNRDIRLMRTTGVNAVSSLLGTSYSKNSKEVAEDKLGGAQARGNVAATFTLPNGGIVEATFLLKARG 154 (717) Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (717) ++|..+...+|.+|+..++++|+.+.... .. .+ T Consensus 64 gtl~~al~~~~~ngg~~~~vv~v~~~~~~---------~~-----------------~~--------------------- 96 (392) T protein:vir:18 64 GTLSASLQAIADQSKPVTVVVRVAEGTGD---------DA-----------------EA--------------------- 96 (392) T ss_pred cchHHHHHHhhcccCceEEEecccccccc---------cc-----------------cc--------------------- Confidence 34445555568889888888877632100 00 00 Q ss_pred eeecCceeEeccccceeeccccccchhheeecCCcccccccceeehhhhhhhhheeeeeeeEeecccccccccCcccCCc Q lcl|Aclame:pro 155 VIIPPNNYTLDVGTEEDMKAGTQPTFAQVLLNENVADMESEITVSYEFTYKDAQGETKTSEVLDNNTDKDGKPMIAKGAD 234 (717) Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~gelld~~ie~~~~p~~~~~ag 234 (717) .+.++ ++-. ++.. T Consensus 97 -------~t~~d-------------------------------------------------liG~-~~~~---------- 109 (392) T protein:vir:18 97 -------QTTSN-------------------------------------------------IIGG-TDEN---------- 109 (392) T ss_pred -------cchhh-------------------------------------------------heec-cccc---------- Confidence 00000 0000 0000 Q ss_pred eEEEEEeeccccceeeecCccccccchheeccceeEEEEecCccccceEEEEeecccccccccceEEEeeccccccceEE Q lcl|Aclame:pro 235 VTIKLEHVALAGLKLYADGIEVVDAKAFTVAGDQLTIHSNSKMKLGASLEAQYAYNLVEVIQPVIELESIFGGGVYNDIM 314 (717) Q Consensus 235 ~i~a~r~~~a~~a~~~~~g~~~~~s~~~g~~an~i~v~l~d~~~t~~~l~v~~a~~~~~~~~d~i~l~a~~~G~~GN~i~ 314 (717) + ...|+ T Consensus 110 ---~-----------~~tg~------------------------------------------------------------ 115 (392) T protein:vir:18 110 ---G-----------KYTGI------------------------------------------------------------ 115 (392) T ss_pred ---c-----------hhhhH------------------------------------------------------------ Confidence 0 00000 Q ss_pred EEEecCCceEEEEEeeeccCccceeeeeeeeccccchhHHHHHHHhhcCccceeEEeeeccccccccccccchhhhhhcc Q lcl|Aclame:pro 315 RKVESKDGAVTVTITKPESKRGMISEDPLVFKSGDYTNFKMLVDAINNHPFNNVVRARTKPEFEATFTSTLQAAADAKFS 394 (717) Q Consensus 315 I~v~~~~~~~t~~lt~~~~~~~~~~~~~~~l~~g~~~~~~~lv~~IN~~~~~~~~~a~~~~~~~~~l~s~~~~~~~~~lt 394 (717) ..|. +..... . T Consensus 116 ---------------------------------------~al~-~~~~~~--~--------------------------- 126 (392) T protein:vir:18 116 ---------------------------------------KALL-TAEAVT--G--------------------------- 126 (392) T ss_pred ---------------------------------------HHHH-hhhhhh--c--------------------------- Confidence 0000 000000 0 Q ss_pred CCccCcccchhhhhhhcccccccccchhhhhhhhccccccceeEEeccccCCcccccccchhHHHHHHHHHHHhhcccce Q lcl|Aclame:pro 395 GGKDELSLDKEEMYKRLGGEKNEEGFVTKQGAYQYLENYEVDYVIPLGVHADTKLIGKYDDFAYQLALACAVMSHYNSVT 474 (717) Q Consensus 395 gG~dG~~~~a~e~~~al~~~~~~~~~v~~~~~~~~le~~~vd~vi~~~~~a~t~~~~~~~~~~~~~a~~~~~~s~~~~~~ 474 (717) ..+++++..+ +. .......+..+|... .. T Consensus 127 --------------------------------------~~p~il~ap~-~~-------~~~v~~~l~~~~~~~-----~~ 155 (392) T protein:vir:18 127 --------------------------------------VKPRILGVPG-LD-------TQEVATALASVCISL-----RA 155 (392) T ss_pred --------------------------------------eeehhcccCc-cc-------hHHHHHHHHHHHhhc-----Cc Confidence 0000000000 00 000111222222211 12 Q ss_pred eEEecCCCcchhhHHHHHHHHHHHHhhhhhhhhcccccccccchhhhhccccceeEEEeCcEEEEecccCcceeechhHH Q lcl|Aclame:pro 475 IGIIPTTTPSDISLAGVEEHVKKLENYANEFYMRDRFGNIIFDADRNKIDLGQFIEVVAGPDFIVRNTRLGQMASTPDAS 554 (717) Q Consensus 475 i~ii~~~~~~~~~~a~v~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~v~~p~~~v~~~~~~~~~~~p~ag~ 554 (717) +.++...+.. ....+.++.+ . ..+.+..+++||++++++.....+++|||++ T Consensus 156 ~~~~d~~~~~--~~~~a~~~~~---~-----------------------~~s~~~~~~~p~~~~~d~~~~~~~~~p~s~~ 207 (392) T protein:vir:18 156 FGYVSAWGCK--TISEAMAYRE---N-----------------------FSQRELMVIWPDFLAWDTTANATATAYATAR 207 (392) T ss_pred EEEEecCCCC--CHHHHHHHHh---h-----------------------ccCceEEEEeCceeeecccCCceEEechHHH Confidence 2333221111 1111111110 0 1145678999999999998888999999999 Q ss_pred HHHHHhcC----CcccccCCceecccccccccCC------HHHHHHHHhCCcEEEEEEcCceEEEEeceecCCCCcccee Q lcl|Aclame:pro 555 YIGMVSQL----KTQSAPTNKPLPSVTALRYTYS------ANQLNRLTKARFATFKYKQDGSIGVVDAPTSAHAGSDYTR 624 (717) Q Consensus 555 vAGl~A~~----gv~~SpaNk~L~gv~~l~~~lt------~~e~d~L~~~GI~~ir~~~g~G~~v~g~rTt~s~ds~~~~ 624 (717) +||+++++ |+|+||+|++|.|+.++.++++ +.|++.||++||+++ ++++|+++||+||++ .|++|+| T Consensus 208 ~AG~~a~~d~~~g~~~spaN~~l~gi~~~~~~~~~~~~~~~~~~~~Ln~~gI~t~--~~~~G~~~wG~rT~~-~d~~~~~ 284 (392) T protein:vir:18 208 ALGLRAYIDQTIGWHKTLSNVGVQGVTGISASVFWDLQASGTDADLLNEAGVTTL--VRKDGFRFWGNRTCS-DDPLFLF 284 (392) T ss_pred HHHHHHhhhccCCceEccCCceeeceeecceecccccCCCcchhhhhhhcCceEE--EcCCCEEEEcccccC-CCcccce Confidence 99999874 7999999999999999887754 668899999999999 567899999999985 5889999 Q ss_pred eehhhhHHHHHHHHHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHhCCceecceee---eecChhhhhCCEEEEEEEEE Q lcl|Aclame:pro 625 LSTARIVKEAVNAVREVADPFIGEPNDTGNRNALTAAVDKRLSKMIENKALLGFDFR---LVVTPQQELLGEGSIELSLE 701 (717) Q Consensus 625 I~vrR~~d~I~~~I~~~~~~~IgepN~~~~~~~i~~~I~~fL~~L~~~GaI~G~~~~---~~~t~~~i~~G~l~v~i~v~ 701 (717) |++||++|+|+++|++.++||+||||++.+|.+|++.|+.||++||++|+|.||+++ ++|+++++.+|+++++|+++ T Consensus 285 i~~rR~~~~i~~~i~~~~~~~v~e~n~~~~~~~i~~~i~~~L~~l~~~gal~g~~v~~d~~~nt~~~i~~G~~~~~v~~~ 364 (392) T protein:vir:18 285 ENYTRTAQVLADTMAEAHMWAVDKPITASLIRDIVDGINAKFRELKSNGYIVDGECWFDEESNDKETLKAGKLYIDYDYT 364 (392) T ss_pred eehhhHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhcCcccceEEEEecCCCCHHHhhCCeEEEEEEEE Confidence 999999999999999999999999999999999999999999999999999999863 46888999999999999999 Q ss_pred ccccccEEEEEEEEeC Q lcl|Aclame:pro 702 APNELRRLTTIVSLSA 717 (717) Q Consensus 702 P~~p~e~I~v~i~~ta 717 (717) |++|+|||++++.+.- T Consensus 365 p~~p~e~I~~~~~~~~ 380 (392) T protein:vir:18 365 PVPPLESLTLRQRITD 380 (392) T ss_pred ecCCcceEEEEEEEch Confidence 9999999999999988 No 33 >protein:vir:98553 Length: 395 # NCBI annotation: gp21 # Family: family:all:115 # MgeID: mge:1533 # MgeName: PSP3 # Cross-refs: genbank:acc:NP_958076;genbank:gi:41057373;genbank:GeneID:2744224 Probab=100.00 E-value=6.6e-56 Score=323.11 Aligned_cols=364 Identities=16% Similarity=0.124 Sum_probs=252.6 Q ss_pred CCcchhcccCCceeEEEecCccccCcCCCCCcceeEEEEEeeccC-----CcccceecC-HHHHHHhhCCcccccCCcch Q lcl|Aclame:pro 1 MAGFDQYQAIPGHNARFKDGNLNLKSDPNPRETESVVLLGTATDG-----PVMQPVRVT-PETAYNIFGKVAHENGVYNG 74 (717) Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g-----p~~~~~~~~-~~~~~~~fg~~~~~~~~~~~ 74 (717) |+.| +|||+++..+.+. .++..++|.+++++|++.++ |+.+||+|+ ..++..-||.. T Consensus 1 m~~~-----~~GV~v~e~~~g~---~~v~~v~tav~~~vgta~~~~~~~~p~~~pv~v~s~~~~~~~~g~~--------- 63 (395) T protein:vir:98 1 MSDF-----HHGTQVIEINDGT---RVISTVATAVVGMVCTASDADATLFPLNEPVLITNVQSAIAKAGKK--------- 63 (395) T ss_pred CCCC-----CCCeEEEEcCCCc---ccccccCcceEEEEeeccCCCccccccccceEeechHHhHhhcccc--------- Confidence 8876 5899999999999 78999999999999999876 899999996 44556668852 Q ss_pred HHHHHHHHHHHHccCCcEEEEEEecCcceeeeeecccccccccccCCcccceeecCcccceeeccCCcceeeeEEEeecc Q lcl|Aclame:pro 75 ATLLPKFEELWAAGNRDIRLMRTTGVNAVSSLLGTSYSKNSKEVAEDKLGGAQARGNVAATFTLPNGGIVEATFLLKARG 154 (717) Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (717) ++|..|...+|.+|+..++++|+.+..... . +. ..+. T Consensus 64 ~tl~~al~~~~~~~~~~~~vv~~~~~~~~~-----------~-~~-----------~~a~-------------------- 100 (395) T protein:vir:98 64 GTLAASLQAIADQSKPVTVVVRVEDGTGDD-----------E-EA-----------ALAQ-------------------- 100 (395) T ss_pred cchhhHHHHHhhccCceEEEeecccccccc-----------c-cc-----------cccc-------------------- Confidence 345555555689999999888776221000 0 00 0000 Q ss_pred eeecCceeEeccccceeeccccccchhheeecCCcccccccceeehhhhhhhhheeeeeeeEeecccccccccCcccCCc Q lcl|Aclame:pro 155 VIIPPNNYTLDVGTEEDMKAGTQPTFAQVLLNENVADMESEITVSYEFTYKDAQGETKTSEVLDNNTDKDGKPMIAKGAD 234 (717) Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~gelld~~ie~~~~p~~~~~ag 234 (717) +. + .+. T Consensus 101 --------~~-----------------------------------------------------~-~i~------------ 106 (395) T protein:vir:98 101 --------TV-----------------------------------------------------S-NII------------ 106 (395) T ss_pred --------cc-----------------------------------------------------c-ccc------------ Confidence 00 0 000 Q ss_pred eEEEEEeeccccceeeecCccccccchheeccceeEEEEecCccccceEEEEeecccccccccceEEEeeccccccceEE Q lcl|Aclame:pro 235 VTIKLEHVALAGLKLYADGIEVVDAKAFTVAGDQLTIHSNSKMKLGASLEAQYAYNLVEVIQPVIELESIFGGGVYNDIM 314 (717) Q Consensus 235 ~i~a~r~~~a~~a~~~~~g~~~~~s~~~g~~an~i~v~l~d~~~t~~~l~v~~a~~~~~~~~d~i~l~a~~~G~~GN~i~ 314 (717) ++. +.+ T Consensus 107 -----------------g~~--------------------~~~------------------------------------- 112 (395) T protein:vir:98 107 -----------------GGT--------------------DEN------------------------------------- 112 (395) T ss_pred -----------------ccc--------------------ccc------------------------------------- Confidence 000 000 Q ss_pred EEEecCCceEEEEEeeeccCccceeeeeeeeccccchhHHHHHHHhhcCccceeEEeeeccccccccccccchhhhhhcc Q lcl|Aclame:pro 315 RKVESKDGAVTVTITKPESKRGMISEDPLVFKSGDYTNFKMLVDAINNHPFNNVVRARTKPEFEATFTSTLQAAADAKFS 394 (717) Q Consensus 315 I~v~~~~~~~t~~lt~~~~~~~~~~~~~~~l~~g~~~~~~~lv~~IN~~~~~~~~~a~~~~~~~~~l~s~~~~~~~~~lt 394 (717) +..+.+..|....... T Consensus 113 ---------------------------------~~~Tgl~al~~~~~~~------------------------------- 128 (395) T protein:vir:98 113 ---------------------------------GKYTGIKALLTAQAVT------------------------------- 128 (395) T ss_pred ---------------------------------cchhHHHHHhhhhhhh------------------------------- Confidence 0000000000000000 Q ss_pred CCccCcccchhhhhhhcccccccccchhhhhhhhccccccceeEEeccccCCcccccccchhHHHHHHHHHHHhhcccce Q lcl|Aclame:pro 395 GGKDELSLDKEEMYKRLGGEKNEEGFVTKQGAYQYLENYEVDYVIPLGVHADTKLIGKYDDFAYQLALACAVMSHYNSVT 474 (717) Q Consensus 395 gG~dG~~~~a~e~~~al~~~~~~~~~v~~~~~~~~le~~~vd~vi~~~~~a~t~~~~~~~~~~~~~a~~~~~~s~~~~~~ 474 (717) + ....+++..+ +. ......++..+|..+ .. T Consensus 129 ----~---------------------------------~~p~il~ap~-~~-------~~~v~~al~~~~~~~-----~~ 158 (395) T protein:vir:98 129 ----G---------------------------------VKPRILGVPG-LD-------TKEVAVALASAAIKL-----RA 158 (395) T ss_pred ----c---------------------------------cchhhccccc-cc-------ccHHHHHHHHHhhhc-----Cc Confidence 0 0000000000 00 000112233333322 12 Q ss_pred eEEecCCCcchhhHHHHHHHHHHHHhhhhhhhhcccccccccchhhhhccccceeEEEeCcEEEEecccCcceeechhHH Q lcl|Aclame:pro 475 IGIIPTTTPSDISLAGVEEHVKKLENYANEFYMRDRFGNIIFDADRNKIDLGQFIEVVAGPDFIVRNTRLGQMASTPDAS 554 (717) Q Consensus 475 i~ii~~~~~~~~~~a~v~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~v~~p~~~v~~~~~~~~~~~p~ag~ 554 (717) +.++....... ...+.++.+ . ..+.+..++|||++++++.....+++|||++ T Consensus 159 ~~~~d~p~~~t--~~~a~~~~~---~-----------------------~~s~~~~~~~p~~~~~d~~~~~~~~~p~s~~ 210 (395) T protein:vir:98 159 FAYVSAWGCKT--ISEAMEYRK---N-----------------------FSQRELMVIWPDFLAWDTVKNTTATAYATAR 210 (395) T ss_pred EEEEEcCCCCC--HHHHHHHHh---c-----------------------cCCceEEEEecceeEecccCCceeeechHHH Confidence 23332221111 111111110 0 1245688999999999998888999999999 Q ss_pred HHHHHhcC----CcccccCCceecccccccccC------CHHHHHHHHhCCcEEEEEEcCceEEEEeceecCCCCcccee Q lcl|Aclame:pro 555 YIGMVSQL----KTQSAPTNKPLPSVTALRYTY------SANQLNRLTKARFATFKYKQDGSIGVVDAPTSAHAGSDYTR 624 (717) Q Consensus 555 vAGl~A~~----gv~~SpaNk~L~gv~~l~~~l------t~~e~d~L~~~GI~~ir~~~g~G~~v~g~rTt~s~ds~~~~ 624 (717) +||++|++ |+|+||+|++|.|+.++.+++ ++.|++.||++||+++ ++++|+++||+||++ .|++|+| T Consensus 211 ~AG~~a~~d~~~g~~~spaN~~i~gi~~~~~~~~~~~~~~~~~~~~Ln~~gI~~~--~~~~G~~~wG~rT~s-~d~~~~~ 287 (395) T protein:vir:98 211 ALGLRAYIDQTVGWHKTLSNVGVQGVTGISASVFWDLQASGTDADLLNEAGVTTL--VRKDGFRFWGNRTCS-DDPLFLF 287 (395) T ss_pred HHHHHHHhhcccCcEeccCCceeecccccceecccccCCCcchHHhhhhcCcEEE--EcCCCEEEEcccccC-CCcccce Confidence 99999975 899999999999999988765 4788999999999999 567899999999984 5889999 Q ss_pred eehhhhHHHHHHHHHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHhCCceecceee---eecChhhhhCCEEEEEEEEE Q lcl|Aclame:pro 625 LSTARIVKEAVNAVREVADPFIGEPNDTGNRNALTAAVDKRLSKMIENKALLGFDFR---LVVTPQQELLGEGSIELSLE 701 (717) Q Consensus 625 I~vrR~~d~I~~~I~~~~~~~IgepN~~~~~~~i~~~I~~fL~~L~~~GaI~G~~~~---~~~t~~~i~~G~l~v~i~v~ 701 (717) |++||++|+|+++|++.++|++||||++.+|.+|++.|+.||++||++|+|.||++. ++|+++++.+|+++++|+++ T Consensus 288 i~~rR~~~~i~~~i~~~~~~~v~e~~~~~~~~~i~~~i~~~L~~l~~~g~l~g~~v~~d~~~nt~~~i~~G~~~~~i~~~ 367 (395) T protein:vir:98 288 ENYTRTAQVLADTMAEAHMWAVDKPITATLIRDIVDGINAKFRELKSNGYIVEGKCWFDEESNDKETLKAGKLYIDYDYT 367 (395) T ss_pred eehhhHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCceeceEEEEecCCCCHHHhhCCeEEEEEEEE Confidence 999999999999999999999999999999999999999999999999999999863 46888999999999999999 Q ss_pred ccccccEEEEEEEEeC Q lcl|Aclame:pro 702 APNELRRLTTIVSLSA 717 (717) Q Consensus 702 P~~p~e~I~v~i~~ta 717 (717) |++|+|||++++.++. T Consensus 368 p~~p~e~I~~~~~~~~ 383 (395) T protein:vir:98 368 PVPPLESLTLRQRITD 383 (395) T ss_pred ecCCcceEEEEEEEch Confidence 9999999999999999 No 34 >protein:vir:96740 Length: 388 # NCBI annotation: phage tail sheath protein FI-like # Family: family:all:115 # MgeID: mge:1628 # MgeName: VP882 # Cross-refs: genbank:acc:YP_001039839;genbank:gi:126010913;genbank:GeneID:5076250 Probab=100.00 E-value=4.2e-56 Score=324.16 Aligned_cols=362 Identities=12% Similarity=0.082 Sum_probs=256.0 Q ss_pred CCcchhcccCCceeEEEecCccccCcCCCCCcceeEEEEEeeccC----CcccceecC-HHHHHHhhCCcccccCCcchH Q lcl|Aclame:pro 1 MAGFDQYQAIPGHNARFKDGNLNLKSDPNPRETESVVLLGTATDG----PVMQPVRVT-PETAYNIFGKVAHENGVYNGA 75 (717) Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g----p~~~~~~~~-~~~~~~~fg~~~~~~~~~~~~ 75 (717) |+--++|. ||+++++.+.+. .++..++|.+++++|+|.++ |..+|++++ ..++.++||.- ...+ T Consensus 1 m~~~~~~~--hGv~v~ev~~g~---~~i~~~~tavi~~Vgta~~ad~~~p~~~~~~i~~~~d~~~~~~~~------~~~g 69 (388) T protein:vir:96 1 MPVIDQFE--HNGISIETHEPP---PPMGPPGDNVVAWVVTAPDKHADVAFSVPFRVANTADAQYLDSTG------NELG 69 (388) T ss_pred CCCCCCCC--CceEEEEcCCCc---ccccccCcceeEEEEecCCCccccccccceeeecchhhhhhhccc------cccc Confidence 88777775 899999999999 99999999999999999886 999999994 45556667632 3345 Q ss_pred HHHHHHHHHHHccCCcEEEEEEecCcceeeeeecccccccccccCCcccceeecCcccceeeccCCcceeeeEEEeecce Q lcl|Aclame:pro 76 TLLPKFEELWAAGNRDIRLMRTTGVNAVSSLLGTSYSKNSKEVAEDKLGGAQARGNVAATFTLPNGGIVEATFLLKARGV 155 (717) Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (717) ||..|-..++.+|+..++++|+.+..+ .. + T Consensus 70 tl~~al~~~~~~~~~~~~vv~v~~g~~------------~~----------------a---------------------- 99 (388) T protein:vir:96 70 TGWHAASETLKKTSVPQYFIVVPEGAD------------DA----------------A---------------------- 99 (388) T ss_pred cchhhhHhhhccCCceEEEEEeccccc------------cc----------------c---------------------- Confidence 666665556677777777766652100 00 0 Q ss_pred eecCceeEeccccceeeccccccchhheeecCCcccccccceeehhhhhhhhheeeeeeeEeecccccccccCcccCCce Q lcl|Aclame:pro 156 IIPPNNYTLDVGTEEDMKAGTQPTFAQVLLNENVADMESEITVSYEFTYKDAQGETKTSEVLDNNTDKDGKPMIAKGADV 235 (717) Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~gelld~~ie~~~~p~~~~~ag~ 235 (717) +.. + + T Consensus 100 -------t~a-------------------------------------------------~-----i-------------- 104 (388) T protein:vir:96 100 -------TMA-------------------------------------------------N-----I-------------- 104 (388) T ss_pred -------ccc-------------------------------------------------e-----e-------------- Confidence 000 0 0 Q ss_pred EEEEEeeccccceeeecCccccccchheeccceeEEEEecCccccceEEEEeecccccccccceEEEeeccccccceEEE Q lcl|Aclame:pro 236 TIKLEHVALAGLKLYADGIEVVDAKAFTVAGDQLTIHSNSKMKLGASLEAQYAYNLVEVIQPVIELESIFGGGVYNDIMR 315 (717) Q Consensus 236 i~a~r~~~a~~a~~~~~g~~~~~s~~~g~~an~i~v~l~d~~~t~~~l~v~~a~~~~~~~~d~i~l~a~~~G~~GN~i~I 315 (717) .+|. + . T Consensus 105 ---------------ig~~----------~----------~--------------------------------------- 110 (388) T protein:vir:96 105 ---------------IGGI----------D----------P--------------------------------------- 110 (388) T ss_pred ---------------eeec----------c----------c--------------------------------------- Confidence 0000 0 0 Q ss_pred EEecCCceEEEEEeeeccCccceeeeeeeeccccchhHHHHHHHhhcCccceeEEeeeccccccccccccchhhhhhccC Q lcl|Aclame:pro 316 KVESKDGAVTVTITKPESKRGMISEDPLVFKSGDYTNFKMLVDAINNHPFNNVVRARTKPEFEATFTSTLQAAADAKFSG 395 (717) Q Consensus 316 ~v~~~~~~~t~~lt~~~~~~~~~~~~~~~l~~g~~~~~~~lv~~IN~~~~~~~~~a~~~~~~~~~l~s~~~~~~~~~ltg 395 (717) .+|.++....+ .++... T Consensus 111 ------------------------------~tg~~~gl~al-~~~~~~-------------------------------- 127 (388) T protein:vir:96 111 ------------------------------TTGRRTGIAAL-TECTER-------------------------------- 127 (388) T ss_pred ------------------------------ccchhhHHHHh-hhcccc-------------------------------- Confidence 00000000000 000000 Q ss_pred CccCcccchhhhhhhcccccccccchhhhhhhhccccccceeE-EeccccCCcccccccchhHHHHHHHHHHHhhcccce Q lcl|Aclame:pro 396 GKDELSLDKEEMYKRLGGEKNEEGFVTKQGAYQYLENYEVDYV-IPLGVHADTKLIGKYDDFAYQLALACAVMSHYNSVT 474 (717) Q Consensus 396 G~dG~~~~a~e~~~al~~~~~~~~~v~~~~~~~~le~~~vd~v-i~~~~~a~t~~~~~~~~~~~~~a~~~~~~s~~~~~~ 474 (717) .+++ .|. +.+ ...+...+..+|... .. T Consensus 128 ---------------------------------------p~il~aPg--~s~------~~~v~~al~~~~~~~-----~~ 155 (388) T protein:vir:96 128 ---------------------------------------PTLIGAPG--FSQ------NKAVIDALASMAKRL-----KC 155 (388) T ss_pred ---------------------------------------eeEEEeec--ccc------chHHHHHHHHHHhhc-----Cc Confidence 0011 111 000 012344555566533 12 Q ss_pred eEEecCCCcchhhHHHHHHHHHHHHhhhhhhhhcccccccccchhhhhccccceeEEEeCcEEEEecccCcceeechhHH Q lcl|Aclame:pro 475 IGIIPTTTPSDISLAGVEEHVKKLENYANEFYMRDRFGNIIFDADRNKIDLGQFIEVVAGPDFIVRNTRLGQMASTPDAS 554 (717) Q Consensus 475 i~ii~~~~~~~~~~a~v~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~v~~p~~~v~~~~~~~~~~~p~ag~ 554 (717) +.++........ ..+ ++.... ......+.+..++|||++++++.....+++|||++ T Consensus 156 ~~i~D~p~~~~~--~~~-~~~~~~---------------------~~~~~~s~~~~~~~P~~~~~d~~~~~~~~~p~s~~ 211 (388) T protein:vir:96 156 RAVIDGPSGSTQ--DAI-DLSGLL---------------------GGEGTGHDRVYMVDPMPAIYSRKAQGNIYVPPSTI 211 (388) T ss_pred EEEEeccCCchh--HHH-HHHhhh---------------------hccCcCcceEEEEeCceeeecccCCceeeechHHH Confidence 334332221111 000 000000 00111356789999999999998889999999999 Q ss_pred HHHHHhcCCcccccCCceeccccccccc------CCHHHHHHHHhCCcEEEEEEcCceEEEEeceecCCCCccceeeehh Q lcl|Aclame:pro 555 YIGMVSQLKTQSAPTNKPLPSVTALRYT------YSANQLNRLTKARFATFKYKQDGSIGVVDAPTSAHAGSDYTRLSTA 628 (717) Q Consensus 555 vAGl~A~~gv~~SpaNk~L~gv~~l~~~------lt~~e~d~L~~~GI~~ir~~~g~G~~v~g~rTt~s~ds~~~~I~vr 628 (717) +||++|++++|+||+|+++ ++.++.+. .++.|++.||++||++|++++++|+++||+||++ |+||++| T Consensus 212 ~AG~~a~~D~~~spaN~~i-~i~g~~~~~~~~~~~~~~~~~~Ln~~gI~~i~~~~~~G~~~wG~rT~~-----~~~i~vr 285 (388) T protein:vir:96 212 AMGAVAAVKPWESPGNQGV-LIQDVARVIDYNILDKSTEGDLLNRNGVSYFARTSMGGFSLIGNRTVT-----GKFISFV 285 (388) T ss_pred HHHHHHhhcCcccccCeeE-EeeeecccccccccCChhhHHhhhhcCceEEEEecCCcEEEEcccccC-----Ccceeeh Confidence 9999999999999999998 47666543 4678899999999999999999999999999983 9999999 Q ss_pred hhHHHHHHHHHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHhCCceecceee---eecChhhhhCCEEEEEEEEEcccc Q lcl|Aclame:pro 629 RIVKEAVNAVREVADPFIGEPNDTGNRNALTAAVDKRLSKMIENKALLGFDFR---LVVTPQQELLGEGSIELSLEAPNE 705 (717) Q Consensus 629 R~~d~I~~~I~~~~~~~IgepN~~~~~~~i~~~I~~fL~~L~~~GaI~G~~~~---~~~t~~~i~~G~l~v~i~v~P~~p 705 (717) |++|+|+++|++.++|++||||++.+|.+|++.|+.||++||++|+|.|+++. .+|+++++.+|+++++|+++|++| T Consensus 286 R~~~~i~~si~~~~~~~v~epn~~~~~~~i~~~i~~fL~~l~~~Gal~g~~~~~d~~~nt~~~i~~G~~~~~i~~~p~~p 365 (388) T protein:vir:96 286 GLEDAIARKLEAASQRAMSKQLTKSFMEQEIKKINLFMQDLVAAEIIPGGEVYLHPTLNTVERYKNGSWYIVIDYGRYSP 365 (388) T ss_pred hhHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeEEEEecCCCCHHHhhCCEEEEEEEEEecCC Confidence 99999999999999999999999999999999999999999999999999864 458889999999999999999999 Q ss_pred ccEEEEEEEEeC Q lcl|Aclame:pro 706 LRRLTTIVSLSA 717 (717) Q Consensus 706 ~e~I~v~i~~ta 717 (717) +|||++++.++. T Consensus 366 ae~I~~~~~~~~ 377 (388) T protein:vir:96 366 NEHMIFHLNAVD 377 (388) T ss_pred cceEEEEEEEch Confidence 999999999999 No 35 >protein:vir:2035 Length: 396 # NCBI annotation: gpFI # Family: family:all:115 # MgeID: mge:315 # MgeName: P2 # Cross-refs: genbank:acc:NP_046778;genbank:gi:9630349;genbank:GeneID:1261516 Probab=100.00 E-value=5.3e-56 Score=323.61 Aligned_cols=364 Identities=14% Similarity=0.126 Sum_probs=252.4 Q ss_pred CCcchhcccCCceeEEEecCccccCcCCCCCcceeEEEEEeeccC-----CcccceecC-HHHHHHhhCCcccccCCcch Q lcl|Aclame:pro 1 MAGFDQYQAIPGHNARFKDGNLNLKSDPNPRETESVVLLGTATDG-----PVMQPVRVT-PETAYNIFGKVAHENGVYNG 74 (717) Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g-----p~~~~~~~~-~~~~~~~fg~~~~~~~~~~~ 74 (717) |+.| +|||+|++.+.+. .++...+|.+++++|++.++ |+.+||+|+ ..++...||+. +.+ T Consensus 1 m~~~-----~~GV~v~e~~~g~---~~i~~v~tav~~~vg~a~~a~~~~~~l~~pvlvts~~~~~~~~g~~------~tL 66 (396) T protein:vir:20 1 MSDY-----HHGVQVLEINEGT---RVISTVSTAIVGMVCTASDADAETFPLNKPVLITNVQSAISKAGKK------GTL 66 (396) T ss_pred CCCC-----CCCeEEEEcCCCc---ceeeecCCceeEEEeeeccCCCccccCccCEEeechHHHHhhcccc------cch Confidence 8875 4999999999999 78999999999999999775 789999995 66667779853 334 Q ss_pred HHHHHHHHHHHHccCCcEEEEEEecCcceeeeeecccccccccccCCcccceeecCcccceeeccCCcceeeeEEEeecc Q lcl|Aclame:pro 75 ATLLPKFEELWAAGNRDIRLMRTTGVNAVSSLLGTSYSKNSKEVAEDKLGGAQARGNVAATFTLPNGGIVEATFLLKARG 154 (717) Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (717) .+.+.+ +|.+|+..++++|+.+.... + . . T Consensus 67 ~~al~~---~~~ngg~~~~v~~~~~~~~~-------------------------~-~-~--------------------- 95 (396) T protein:vir:20 67 AASLQA---IADQSKPVTVVMRVEDGTGD-------------------------D-E-E--------------------- 95 (396) T ss_pred hhhhhh---hhccCceeEEEEeccccccc-------------------------c-c-c--------------------- Confidence 444444 47777777777665422000 0 0 0 Q ss_pred eeecCceeEeccccceeeccccccchhheeecCCcccccccceeehhhhhhhhheeeeeeeEeecccccccccCcccCCc Q lcl|Aclame:pro 155 VIIPPNNYTLDVGTEEDMKAGTQPTFAQVLLNENVADMESEITVSYEFTYKDAQGETKTSEVLDNNTDKDGKPMIAKGAD 234 (717) Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~gelld~~ie~~~~p~~~~~ag 234 (717) + .. T Consensus 96 ---------------------------------------------------------------~---~~----------- 98 (396) T protein:vir:20 96 ---------------------------------------------------------------T---KL----------- 98 (396) T ss_pred ---------------------------------------------------------------c---cc----------- Confidence 0 00 Q ss_pred eEEEEEeeccccceeeecCccccccchheeccceeEEEEecCccccceEEEEeecccccccccceEEEeeccccccceEE Q lcl|Aclame:pro 235 VTIKLEHVALAGLKLYADGIEVVDAKAFTVAGDQLTIHSNSKMKLGASLEAQYAYNLVEVIQPVIELESIFGGGVYNDIM 314 (717) Q Consensus 235 ~i~a~r~~~a~~a~~~~~g~~~~~s~~~g~~an~i~v~l~d~~~t~~~l~v~~a~~~~~~~~d~i~l~a~~~G~~GN~i~ 314 (717) + .+...+ . + ..... T Consensus 99 ---a----------~t~~~~--~-----~--------~~~~~-------------------------------------- 112 (396) T protein:vir:20 99 ---A----------QTVSNI--I-----G--------TTDEN-------------------------------------- 112 (396) T ss_pred ---c----------cccccc--c-----c--------ccccc-------------------------------------- Confidence 0 000000 0 0 00000 Q ss_pred EEEecCCceEEEEEeeeccCccceeeeeeeeccccchhHHHHHHHhhcCccceeEEeeeccccccccccccchhhhhhcc Q lcl|Aclame:pro 315 RKVESKDGAVTVTITKPESKRGMISEDPLVFKSGDYTNFKMLVDAINNHPFNNVVRARTKPEFEATFTSTLQAAADAKFS 394 (717) Q Consensus 315 I~v~~~~~~~t~~lt~~~~~~~~~~~~~~~l~~g~~~~~~~lv~~IN~~~~~~~~~a~~~~~~~~~l~s~~~~~~~~~lt 394 (717) . . .++ ...+... . +. . T Consensus 113 -----------------~----~--------~tg----~~al~~~-~--~~--------------~-------------- 128 (396) T protein:vir:20 113 -----------------G----Q--------YTG----LKAMLAA-E--SV--------------T-------------- 128 (396) T ss_pred -----------------c----c--------cch----hhhhhhh-c--cc--------------c-------------- Confidence 0 0 000 0000000 0 00 0 Q ss_pred CCccCcccchhhhhhhcccccccccchhhhhhhhccccccceeEEeccccCCcccccccchhHHHHHHHHHHHhhcccce Q lcl|Aclame:pro 395 GGKDELSLDKEEMYKRLGGEKNEEGFVTKQGAYQYLENYEVDYVIPLGVHADTKLIGKYDDFAYQLALACAVMSHYNSVT 474 (717) Q Consensus 395 gG~dG~~~~a~e~~~al~~~~~~~~~v~~~~~~~~le~~~vd~vi~~~~~a~t~~~~~~~~~~~~~a~~~~~~s~~~~~~ 474 (717) +. ...+. +.|. . ........+..+|..+ .. T Consensus 129 ----~~---~p~i~-----------------------------~ap~------~---~~~~v~~al~~~~~~~-----~~ 158 (396) T protein:vir:20 129 ----GV---KPRIL-----------------------------GVPG------L---DTKEVAVALASVCQKL-----RA 158 (396) T ss_pred ----cc---chhhh-----------------------------hhhh------h---ccHHHHHHHHHHHhcC-----Cc Confidence 00 00000 0000 0 0011234445555432 23 Q ss_pred eEEecCCCcchhhHHHHHHHHHHHHhhhhhhhhcccccccccchhhhhccccceeEEEeCcEEEEecccCcceeechhHH Q lcl|Aclame:pro 475 IGIIPTTTPSDISLAGVEEHVKKLENYANEFYMRDRFGNIIFDADRNKIDLGQFIEVVAGPDFIVRNTRLGQMASTPDAS 554 (717) Q Consensus 475 i~ii~~~~~~~~~~a~v~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~v~~p~~~v~~~~~~~~~~~p~ag~ 554 (717) +.++......+ .+.+.++.+ . ..+.+..+++||++++++.....+++|||++ T Consensus 159 ~~~iD~p~~~~--~~~a~~~r~-------------------------~-~~s~~~~~~~P~~~~~d~~~~~~~~~p~s~~ 210 (396) T protein:vir:20 159 FGYISAWGCKT--ISEVKAYRQ-------------------------N-FSQRELMVIWPDFLAWDTVTSTTATAYATAR 210 (396) T ss_pred EEEEecCCCCC--HHHHHHHhh-------------------------C-CCCceEEEEcCccccccCcCCcceeechhHH Confidence 34443322211 122221110 0 1145788999999999998888999999999 Q ss_pred HHHHHhcC----CcccccCCceecccccccccC------CHHHHHHHHhCCcEEEEEEcCceEEEEeceecCCCCcccee Q lcl|Aclame:pro 555 YIGMVSQL----KTQSAPTNKPLPSVTALRYTY------SANQLNRLTKARFATFKYKQDGSIGVVDAPTSAHAGSDYTR 624 (717) Q Consensus 555 vAGl~A~~----gv~~SpaNk~L~gv~~l~~~l------t~~e~d~L~~~GI~~ir~~~g~G~~v~g~rTt~s~ds~~~~ 624 (717) +||++|++ |+|+||+|++|.|+.++.+.+ +..|++.||++||+++ ++++|+++||+||++ .|+.|+| T Consensus 211 ~Ag~~a~~d~~~g~~~spaN~~l~gi~~~~~~~~~~~~~~~~~~~~Ln~~gi~~~--~~~~G~~~wG~rT~s-~d~~~~~ 287 (396) T protein:vir:20 211 ALGLRAKIDQEQGWHKTLSNVGVNGVTGISASVFWDLQESGTDADLLNESGVTTL--IRRDGFRFWGNRTCS-DDPLFLF 287 (396) T ss_pred HHHHHHHhhhhcCcEeccCCceeccceecceecccccCCCcchhhhhhhcCcEEE--EcCCCEEEEcccccC-CCcccce Confidence 99999974 799999999999999988764 4678999999999999 568899999999985 5889999 Q ss_pred eehhhhHHHHHHHHHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHhCCceecceee---eecChhhhhCCEEEEEEEEE Q lcl|Aclame:pro 625 LSTARIVKEAVNAVREVADPFIGEPNDTGNRNALTAAVDKRLSKMIENKALLGFDFR---LVVTPQQELLGEGSIELSLE 701 (717) Q Consensus 625 I~vrR~~d~I~~~I~~~~~~~IgepN~~~~~~~i~~~I~~fL~~L~~~GaI~G~~~~---~~~t~~~i~~G~l~v~i~v~ 701 (717) |++||++|+|+++|++.++|++||||++.+|.++++.|+.||++||++|+|.||+++ ++|+++++.+|+++++|+++ T Consensus 288 i~~rR~~~~i~~~~~~~~~~~v~e~~~~~~~~~i~~~i~~~L~~l~~~G~l~g~~v~~d~~~nt~~~i~~G~~~~~i~~~ 367 (396) T protein:vir:20 288 ENYTRTAQVVADTMAEAHMWAVDKPITATLIRDIVDGINAKFRELKTNGYIVDATCWFSEESNDAETLKAGKLYIDYDYT 367 (396) T ss_pred eehhhHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCcceeceEEEEecCCCCHHHhhCCEEEEEEEEE Confidence 999999999999999999999999999999999999999999999999999999864 35788899999999999999 Q ss_pred ccccccEEEEEEEEeC Q lcl|Aclame:pro 702 APNELRRLTTIVSLSA 717 (717) Q Consensus 702 P~~p~e~I~v~i~~ta 717 (717) |++|+|||++++.+.. T Consensus 368 p~~p~e~i~~~~~~~~ 383 (396) T protein:vir:20 368 PVPPLENLTLRQRITD 383 (396) T ss_pred ecCCcceEEEEEEEch Confidence 9999999999999998 No 36 >protein:vir:79181 Length: 390 # NCBI annotation: gp30, phage tail sheath protein # Family: family:all:115 # MgeID: mge:1866 # MgeName: phiE202 # Cross-refs: genbank:acc:YP_001111061;genbank:gi:134288772;genbank:GeneID:4960700 Probab=100.00 E-value=7.5e-56 Score=322.81 Aligned_cols=359 Identities=14% Similarity=0.105 Sum_probs=252.9 Q ss_pred CCcchhcccCCceeEEEecCccccCcCCCCCcceeEEEEEeeccC-----CcccceecC-HHHHHHhhCCcccccCCcch Q lcl|Aclame:pro 1 MAGFDQYQAIPGHNARFKDGNLNLKSDPNPRETESVVLLGTATDG-----PVMQPVRVT-PETAYNIFGKVAHENGVYNG 74 (717) Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g-----p~~~~~~~~-~~~~~~~fg~~~~~~~~~~~ 74 (717) |+- +| +||++|++.+.+. .+++.++|.+++++|++.++ |+.+|++|+ ..++...||. . T Consensus 1 M~~--~~--~~Gv~v~e~~~~~---~~i~~~~tav~~~vg~a~dad~~~~p~n~pv~its~~~~~~~~g~---------~ 64 (390) T protein:vir:79 1 MPQ--DY--HHGVRVIEINEGG---RPIRSVSTAVLGVVCTAADADASAFPLNTPVLLTNVVAALGKAGK---------K 64 (390) T ss_pred Ccc--cc--CCCeEEEEcCCCc---ccccccCCceeEEEEecCCCCccccccccceEeecHHHHHHhcCC---------C Confidence 765 34 7999999999999 89999999999999999998 999999996 4455667884 2 Q ss_pred HHHHHHHHHHHHccCCcEEEEEEecCcceeeeeecccccccccccCCcccceeecCcccceeeccCCcceeeeEEEeecc Q lcl|Aclame:pro 75 ATLLPKFEELWAAGNRDIRLMRTTGVNAVSSLLGTSYSKNSKEVAEDKLGGAQARGNVAATFTLPNGGIVEATFLLKARG 154 (717) Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (717) ++|..+...+|.+|+..+|++|+....+ .. .. T Consensus 65 ~tL~~al~~~~~~~~~~~~vv~v~~~~~------------~~---------------~~--------------------- 96 (390) T protein:vir:79 65 GTLRRTLDAIGKQTKPLTVVVRVAEGKD------------AD---------------ET--------------------- 96 (390) T ss_pred ccchhhhhhhcccccceEEEEeeccccc------------cc---------------cc--------------------- Confidence 4555566556788888888888762200 00 00 Q ss_pred eeecCceeEeccccceeeccccccchhheeecCCcccccccceeehhhhhhhhheeeeeeeEeecccccccccCcccCCc Q lcl|Aclame:pro 155 VIIPPNNYTLDVGTEEDMKAGTQPTFAQVLLNENVADMESEITVSYEFTYKDAQGETKTSEVLDNNTDKDGKPMIAKGAD 234 (717) Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~gelld~~ie~~~~p~~~~~ag 234 (717) ..+ + . |. .++ . T Consensus 97 --------~~~-----------------~----------------------------i-g~-~~~--~------------ 107 (390) T protein:vir:79 97 --------TSN-----------------V----------------------------I-GT-VTP--D------------ 107 (390) T ss_pred --------cce-----------------e----------------------------e-ec-ccc--c------------ Confidence 000 0 0 00 000 0 Q ss_pred eEEEEEeeccccceeeecCccccccchheeccceeEEEEecCccccceEEEEeecccccccccceEEEeeccccccceEE Q lcl|Aclame:pro 235 VTIKLEHVALAGLKLYADGIEVVDAKAFTVAGDQLTIHSNSKMKLGASLEAQYAYNLVEVIQPVIELESIFGGGVYNDIM 314 (717) Q Consensus 235 ~i~a~r~~~a~~a~~~~~g~~~~~s~~~g~~an~i~v~l~d~~~t~~~l~v~~a~~~~~~~~d~i~l~a~~~G~~GN~i~ 314 (717) + ...|+.. +++. ++ T Consensus 108 ---~-----------~~tgl~a----------------l~~~----------------------------~~-------- 121 (390) T protein:vir:79 108 ---G-----------KYTGIKA----------------LLAA----------------------------QG-------- 121 (390) T ss_pred ---c-----------cchhhhh----------------hhhh----------------------------hh-------- Confidence 0 0000000 0000 00 Q ss_pred EEEecCCceEEEEEeeeccCccceeeeeeeeccccchhHHHHHHHhhcCccceeEEeeeccccccccccccchhhhhhcc Q lcl|Aclame:pro 315 RKVESKDGAVTVTITKPESKRGMISEDPLVFKSGDYTNFKMLVDAINNHPFNNVVRARTKPEFEATFTSTLQAAADAKFS 394 (717) Q Consensus 315 I~v~~~~~~~t~~lt~~~~~~~~~~~~~~~l~~g~~~~~~~lv~~IN~~~~~~~~~a~~~~~~~~~l~s~~~~~~~~~lt 394 (717) . .+. .| T Consensus 122 ----------------------~---------~~~-------------~p------------------------------ 127 (390) T protein:vir:79 122 ----------------------A---------LGV-------------KP------------------------------ 127 (390) T ss_pred ----------------------h---------hcc-------------cc------------------------------ Confidence 0 000 00 Q ss_pred CCccCcccchhhhhhhcccccccccchhhhhhhhccccccceeEEeccccCCcccccccchhHHHHHHHHHHHhhcccce Q lcl|Aclame:pro 395 GGKDELSLDKEEMYKRLGGEKNEEGFVTKQGAYQYLENYEVDYVIPLGVHADTKLIGKYDDFAYQLALACAVMSHYNSVT 474 (717) Q Consensus 395 gG~dG~~~~a~e~~~al~~~~~~~~~v~~~~~~~~le~~~vd~vi~~~~~a~t~~~~~~~~~~~~~a~~~~~~s~~~~~~ 474 (717) ++++.. .+. .......+..+|... .. T Consensus 128 -----------------------------------------~il~ap-~~~-------~~~v~~~l~~~a~~~-----~~ 153 (390) T protein:vir:79 128 -----------------------------------------RILAAP-GLD-------TQPVAAALAATAQSL-----RA 153 (390) T ss_pred -----------------------------------------ccccCC-ccc-------chHHHHHHHHhhhhc-----ce Confidence 000000 000 001123334444432 12 Q ss_pred eEEecCCCcchhhHHHHHHHHHHHHhhhhhhhhcccccccccchhhhhccccceeEEEeCcEEEEecccCcceeechhHH Q lcl|Aclame:pro 475 IGIIPTTTPSDISLAGVEEHVKKLENYANEFYMRDRFGNIIFDADRNKIDLGQFIEVVAGPDFIVRNTRLGQMASTPDAS 554 (717) Q Consensus 475 i~ii~~~~~~~~~~a~v~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~v~~p~~~v~~~~~~~~~~~p~ag~ 554 (717) +.++...+. .....+..+. ....+.+..+++||+.++++.....+++|||++ T Consensus 154 ~ai~D~p~~--~t~~~a~~~~--------------------------~~~~s~~~~~~~p~~~~~d~~~~~~~~~p~s~~ 205 (390) T protein:vir:79 154 MAYVSASGC--KTKEEAAAYR--------------------------RQFGQREIMVIWPDWLGWDDTTNSTAVIPAPAI 205 (390) T ss_pred EEEEEccCC--CCHHHHHHHh--------------------------cCCCCceEEEEcCceeecccccCceeEeehHHH Confidence 333332211 1111111111 001245788999999999998888999999999 Q ss_pred HHHHHhcC----CcccccCCceecccccccccCCHH------HHHHHHhCCcEEEEEEcCceEEEEeceecCCCCcccee Q lcl|Aclame:pro 555 YIGMVSQL----KTQSAPTNKPLPSVTALRYTYSAN------QLNRLTKARFATFKYKQDGSIGVVDAPTSAHAGSDYTR 624 (717) Q Consensus 555 vAGl~A~~----gv~~SpaNk~L~gv~~l~~~lt~~------e~d~L~~~GI~~ir~~~g~G~~v~g~rTt~s~ds~~~~ 624 (717) +||++|++ |+|+||+|++|.|+.++.++++.. |.+.||++||+++ ++++|+++||+||++ .|+.|+| T Consensus 206 ~Ag~~a~~D~~~g~~~spsN~~i~gi~~~~~~~~~~~~~~~~~a~~Ln~~gi~t~--~~~~G~~~wG~rT~~-~d~~~~~ 282 (390) T protein:vir:79 206 AAGLRAKIDNDIGWHKTISNVVVNGVSGISADVSWDLQDPATDAGYLNEHEVTTL--VNRNGFRFWGERTCS-DDPKFAF 282 (390) T ss_pred HHHHHHhhhccCCcEEccCCceeeccceeeeeccccccccchhhhhhhhcCcEEE--EcCCCEEEEeccccC-CCcccce Confidence 99999875 699999999999999998877654 4468999999998 567899999999984 5889999 Q ss_pred eehhhhHHHHHHHHHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHhCCceecceee---eecChhhhhCCEEEEEEEEE Q lcl|Aclame:pro 625 LSTARIVKEAVNAVREVADPFIGEPNDTGNRNALTAAVDKRLSKMIENKALLGFDFR---LVVTPQQELLGEGSIELSLE 701 (717) Q Consensus 625 I~vrR~~d~I~~~I~~~~~~~IgepN~~~~~~~i~~~I~~fL~~L~~~GaI~G~~~~---~~~t~~~i~~G~l~v~i~v~ 701 (717) |++||++|+|+++|++.++|++||||++.+|.+|++.|+.||++||++|+|.||+++ .+|+++++.+|+++++|+++ T Consensus 283 i~vrR~~~~i~~~i~~~~~~~v~e~~~~~~~~~i~~~i~~~L~~l~~~gal~g~~v~~d~~~nt~~~i~~G~~~~~i~~~ 362 (390) T protein:vir:79 283 ENYTRTAQVAADSIAEAQMPVVDGPLNPSLARDIVESINGWFRQQVANGYLIGGSAWIDPEPNTADILASGKAYIDYDYT 362 (390) T ss_pred eeehhhHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeEEEEecCCCCHHHhhCCEEEEEEEEE Confidence 999999999999999999999999999999999999999999999999999999864 36888999999999999999 Q ss_pred ccccccEEEEEEEEeC Q lcl|Aclame:pro 702 APNELRRLTTIVSLSA 717 (717) Q Consensus 702 P~~p~e~I~v~i~~ta 717 (717) |++|+|||++++.++- T Consensus 363 p~~p~e~i~~~~~~~~ 378 (390) T protein:vir:79 363 PVPPLENLVLRQRITD 378 (390) T ss_pred ecCCcceEEEEEEEch Confidence 9999999999999988 No 37 >protein:vir:100323 Length: 393 # NCBI annotation: tail sheath protein FI # Family: family:all:115 # MgeID: mge:1484 # MgeName: phi-MhaA1-PHL101 # Cross-refs: genbank:acc:YP_655492;genbank:gi:109289960;genbank:GeneID:4157366 Probab=100.00 E-value=1.4e-55 Score=321.34 Aligned_cols=360 Identities=13% Similarity=0.082 Sum_probs=254.5 Q ss_pred CCcchhcccCCceeEEEecCccccCcCCCCCcceeEEEEEeeccC-----CcccceecC-HHHHHHhhCCcccccCCcch Q lcl|Aclame:pro 1 MAGFDQYQAIPGHNARFKDGNLNLKSDPNPRETESVVLLGTATDG-----PVMQPVRVT-PETAYNIFGKVAHENGVYNG 74 (717) Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g-----p~~~~~~~~-~~~~~~~fg~~~~~~~~~~~ 74 (717) |+-=++|. |||++++.+.+. .++...+|.+++++|++.++ |+++|++|+ ..++.+-||+. T Consensus 1 m~m~~~~~--~GV~v~e~~~g~---~~i~~~~tav~~~vgta~~~~~~~~pln~pv~i~s~~~~~~~~g~~--------- 66 (393) T protein:vir:10 1 MSILDTYL--HGVEVVEVNAGG---VTISTAATSVIGVVCTGDQADAETFPLNTPVLITNPLNYLEKAGST--------- 66 (393) T ss_pred CCCCCccC--CCeEEEEcCCCc---ceecccCcceeEEEeeccCcCcccccCccceEecchHHHHHhhCCc--------- Confidence 77777775 999999999998 78999999999999999998 999999996 45556678842 Q ss_pred HHHHHHHHHHHHccCCcEEEEEEecCcceeeeeecccccccccccCCcccceeecCcccceeeccCCcceeeeEEEeecc Q lcl|Aclame:pro 75 ATLLPKFEELWAAGNRDIRLMRTTGVNAVSSLLGTSYSKNSKEVAEDKLGGAQARGNVAATFTLPNGGIVEATFLLKARG 154 (717) Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (717) ++|..|...+|.+++..++++|+.... ... . T Consensus 67 g~L~~al~~~~~~~~~~~~vv~v~~~~------------~~~----------------~--------------------- 97 (393) T protein:vir:10 67 GTLRRTLNSIGSIVKTPTVIVRVAESD------------DSD----------------T--------------------- 97 (393) T ss_pred cchhhhhhhhhcccCceEEEeecccCc------------ccc----------------c--------------------- Confidence 455666666678888888887775220 000 0 Q ss_pred eeecCceeEeccccceeeccccccchhheeecCCcccccccceeehhhhhhhhheeeeeeeEeecccccccccCcccCCc Q lcl|Aclame:pro 155 VIIPPNNYTLDVGTEEDMKAGTQPTFAQVLLNENVADMESEITVSYEFTYKDAQGETKTSEVLDNNTDKDGKPMIAKGAD 234 (717) Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~gelld~~ie~~~~p~~~~~ag 234 (717) +.+. + .|...+. T Consensus 98 --------t~~~----------------i-----------------------------ig~~~~~--------------- 109 (393) T protein:vir:10 98 --------LTAN----------------I-----------------------------VGTQENG--------------- 109 (393) T ss_pred --------cccc----------------c-----------------------------ccccccc--------------- Confidence 0000 0 0000000 Q ss_pred eEEEEEeeccccceeeecCccccccchheeccceeEEEEecCccccceEEEEeecccccccccceEEEeeccccccceEE Q lcl|Aclame:pro 235 VTIKLEHVALAGLKLYADGIEVVDAKAFTVAGDQLTIHSNSKMKLGASLEAQYAYNLVEVIQPVIELESIFGGGVYNDIM 314 (717) Q Consensus 235 ~i~a~r~~~a~~a~~~~~g~~~~~s~~~g~~an~i~v~l~d~~~t~~~l~v~~a~~~~~~~~d~i~l~a~~~G~~GN~i~ 314 (717) . .-|++ T Consensus 110 ---~------------~tgl~----------------------------------------------------------- 115 (393) T protein:vir:10 110 ---K------------FTGIK----------------------------------------------------------- 115 (393) T ss_pred ---h------------hhHHH----------------------------------------------------------- Confidence 0 00000 Q ss_pred EEEecCCceEEEEEeeeccCccceeeeeeeeccccchhHHHHHHHhhcCccceeEEeeeccccccccccccchhhhhhcc Q lcl|Aclame:pro 315 RKVESKDGAVTVTITKPESKRGMISEDPLVFKSGDYTNFKMLVDAINNHPFNNVVRARTKPEFEATFTSTLQAAADAKFS 394 (717) Q Consensus 315 I~v~~~~~~~t~~lt~~~~~~~~~~~~~~~l~~g~~~~~~~lv~~IN~~~~~~~~~a~~~~~~~~~l~s~~~~~~~~~lt 394 (717) .|-...+... T Consensus 116 ----------------------------------------al~~~~~~~~------------------------------ 125 (393) T protein:vir:10 116 ----------------------------------------ALLTAQSTVF------------------------------ 125 (393) T ss_pred ----------------------------------------HHHhhhhhcc------------------------------ Confidence 0000000000 Q ss_pred CCccCcccchhhhhhhcccccccccchhhhhhhhccccccceeEEeccccCCcccccccchhHHHHHHHHHHHhhcccce Q lcl|Aclame:pro 395 GGKDELSLDKEEMYKRLGGEKNEEGFVTKQGAYQYLENYEVDYVIPLGVHADTKLIGKYDDFAYQLALACAVMSHYNSVT 474 (717) Q Consensus 395 gG~dG~~~~a~e~~~al~~~~~~~~~v~~~~~~~~le~~~vd~vi~~~~~a~t~~~~~~~~~~~~~a~~~~~~s~~~~~~ 474 (717) ...++++..+ +.. .....++..+|..+. . T Consensus 126 --------------------------------------~~p~li~apg-~~~-------~~~~~al~~~~~~~~-----~ 154 (393) T protein:vir:10 126 --------------------------------------VKPKLLCVPQ-HDN-------QAVATELLSVAKKLN-----A 154 (393) T ss_pred --------------------------------------eeeeeeeecc-ccc-------hHHHHHHHHHhhccC-----c Confidence 0000000000 000 001223334443321 1 Q ss_pred eEEecCCCcchhhHHHHHHHHHHHHhhhhhhhhcccccccccchhhhhccccceeEEEeCcEEEEecccCcceeechhHH Q lcl|Aclame:pro 475 IGIIPTTTPSDISLAGVEEHVKKLENYANEFYMRDRFGNIIFDADRNKIDLGQFIEVVAGPDFIVRNTRLGQMASTPDAS 554 (717) Q Consensus 475 i~ii~~~~~~~~~~a~v~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~v~~p~~~v~~~~~~~~~~~p~ag~ 554 (717) ..++.. ++... ...+..+.+ ...+.+..+++||+.++++.....+++|||++ T Consensus 155 ~~~v~d-~~~~t-~~~ai~~~~--------------------------~~~s~~~~~~~P~~~~~d~~~~~~~~~p~s~~ 206 (393) T protein:vir:10 155 FAFISD-NGATT-KEQAYTYRQ--------------------------NFSQREGMMIFGDWKSYNTDKKAYDTDYAVAR 206 (393) T ss_pred EEEEEc-CCCCC-HHHHHHHhh--------------------------hcCCceEEEEecccccccccCCceeEeehhHH Confidence 112111 11111 111111110 01135678999999999998888999999999 Q ss_pred HHHHHhcC----CcccccCCceecccccccccC------CHHHHHHHHhCCcEEEEEEcCceEEEEeceecCCCCcccee Q lcl|Aclame:pro 555 YIGMVSQL----KTQSAPTNKPLPSVTALRYTY------SANQLNRLTKARFATFKYKQDGSIGVVDAPTSAHAGSDYTR 624 (717) Q Consensus 555 vAGl~A~~----gv~~SpaNk~L~gv~~l~~~l------t~~e~d~L~~~GI~~ir~~~g~G~~v~g~rTt~s~ds~~~~ 624 (717) +||++|++ |+|+||+|++|.|+.++.+.+ ++.|++.||++||+++ ++++|+++||+||++ .|+.|+| T Consensus 207 ~Ag~~a~~d~~~G~~~spaN~~l~gi~~~~~~~~~~~~~~~~~~~~Ln~~gI~t~--~~~~G~~~wG~rT~s-~d~~~~~ 283 (393) T protein:vir:10 207 ACALQAYIDKTVGWHKNISNVELDGVTGITKAVEFDINESSTEANYLNEKGITIC--LNHNGFRYWGSRTLA-TDTRWAF 283 (393) T ss_pred HHHHHHHhhcCCCcEEccCCceeeceeecceecccccCCCcchhHhHhhcCceEE--EcCCCEEEEcccccC-CCcccce Confidence 99999975 799999999999999988764 4778999999999999 567899999999985 5889999 Q ss_pred eehhhhHHHHHHHHHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHhCC--ceeccee--eeecChhhhhCCEEEEEEEE Q lcl|Aclame:pro 625 LSTARIVKEAVNAVREVADPFIGEPNDTGNRNALTAAVDKRLSKMIENK--ALLGFDF--RLVVTPQQELLGEGSIELSL 700 (717) Q Consensus 625 I~vrR~~d~I~~~I~~~~~~~IgepN~~~~~~~i~~~I~~fL~~L~~~G--aI~G~~~--~~~~t~~~i~~G~l~v~i~v 700 (717) |++||++++|+++|++.++|++||||++.+|.++++.|+.||++||+.| +|.|+++ +.+|+++++.+|+++++|++ T Consensus 284 i~vrR~~~~i~~~i~~~~~~~v~e~~~~~~~~~i~~~i~~~L~~l~~~g~~al~g~~v~~~~~nt~~~i~~G~~~~~i~~ 363 (393) T protein:vir:10 284 QQSVRTAQIIKETIGAGLAWAVDMPLTPLRVKTMLEAINNKLRSWASGDDPRILGARVWVAEEITADIIKSGKFVIKYDY 363 (393) T ss_pred eehhhHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhccccccccceEEecCCCCHHHhhCCEEEEEEEE Confidence 9999999999999999999999999999999999999999999999865 8999985 56799999999999999999 Q ss_pred EccccccEEEEEEEEeC Q lcl|Aclame:pro 701 EAPNELRRLTTIVSLSA 717 (717) Q Consensus 701 ~P~~p~e~I~v~i~~ta 717 (717) +|++|+|||++++.++. T Consensus 364 ~p~~p~e~I~~~~~~~~ 380 (393) T protein:vir:10 364 HWIPSLESLGLEQRVND 380 (393) T ss_pred EecCCcceEEEEEEEch Confidence 99999999999999998 No 38 >protein:vir:102957 Length: 437 # NCBI annotation: sheath tail protein # Family: family:all:632 # MgeID: mge:1461 # MgeName: EJ-1 # Cross-refs: genbank:acc:NP_945292;genbank:gi:39653727;uniprot:Q708M0;genbank:GeneID:2672871 Probab=100.00 E-value=9.6e-54 Score=311.25 Aligned_cols=422 Identities=15% Similarity=0.137 Sum_probs=283.5 Q ss_pred CCcc---hhcccCCceeEEEecCccccCcCCCCCcceeEEEEEeeccCCcccceecC-HHHHHHhhCCcccccCCcchHH Q lcl|Aclame:pro 1 MAGF---DQYQAIPGHNARFKDGNLNLKSDPNPRETESVVLLGTATDGPVMQPVRVT-PETAYNIFGKVAHENGVYNGAT 76 (717) Q Consensus 1 ~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~gp~~~~~~~~-~~~~~~~fg~~~~~~~~~~~~~ 76 (717) |+|. .|=.-+||+||+|+..+. ..++.++|++++++|.+.|||+++|++|+ ..++.+.||... .+.+. T Consensus 1 m~gg~~~~~~k~~PGvYi~~~~~~~---~~i~~~~~~~~a~~~~~~~Gp~~~~~~i~s~~d~~~~fG~~~-----~~~~~ 72 (437) T protein:vir:10 1 MAGGIWKRQNKVRPGAYINVKSKDI---AMTRLGGDGVVTVPLALSFGQSKKLMKIRRGEDLFKKLGYEQ-----ESPQL 72 (437) T ss_pred CCcceecccceecCceeEEEecCCc---ceeeccCCcEEEEEEEecCCCCceeEEEecHHHHHHHcCCcc-----chhHH Confidence 9984 344469999999998877 78999999999999999999999999996 566699999531 12221 Q ss_pred HHHHHHHHHHccCCcEEEEEEecCcceeeeeecccccccccccCCcccceeecCcccceeeccCCcceeeeEEEeeccee Q lcl|Aclame:pro 77 LLPKFEELWAAGNRDIRLMRTTGVNAVSSLLGTSYSKNSKEVAEDKLGGAQARGNVAATFTLPNGGIVEATFLLKARGVI 156 (717) Q Consensus 77 ~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (717) + +.. ++.+|++.+|++|+.+- + .| +. T Consensus 73 ~--~~~-~~~~g~~~~~~~R~~~g------------~------------------~a-~~-------------------- 98 (437) T protein:vir:10 73 L--LLN-EAFKRVSEVLLYRLNTG------------E------------------KA-NV-------------------- 98 (437) T ss_pred H--HHH-HHhcCCCEEEEEECCCC------------c------------------ee-eE-------------------- Confidence 1 122 34489999999998611 0 01 00 Q ss_pred ecCceeEeccccceeeccccccchhheeecCCcccccccceeehhhhhhhhheeeeeeeEeecccccccccCcccCCceE Q lcl|Aclame:pro 157 IPPNNYTLDVGTEEDMKAGTQPTFAQVLLNENVADMESEITVSYEFTYKDAQGETKTSEVLDNNTDKDGKPMIAKGADVT 236 (717) Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~gelld~~ie~~~~p~~~~~ag~i 236 (717) +| T Consensus 99 ------tl------------------------------------------------------------------------ 100 (437) T protein:vir:10 99 ------SL------------------------------------------------------------------------ 100 (437) T ss_pred ------ee------------------------------------------------------------------------ Confidence 00 Q ss_pred EEEEeeccccceeeecCccccccchheeccceeEEEEecCccccceEEEEeecccccccccceEEEeeccccccceEEEE Q lcl|Aclame:pro 237 IKLEHVALAGLKLYADGIEVVDAKAFTVAGDQLTIHSNSKMKLGASLEAQYAYNLVEVIQPVIELESIFGGGVYNDIMRK 316 (717) Q Consensus 237 ~a~r~~~a~~a~~~~~g~~~~~s~~~g~~an~i~v~l~d~~~t~~~l~v~~a~~~~~~~~d~i~l~a~~~G~~GN~i~I~ 316 (717) .+.++++|+|||.|||.|+|. T Consensus 101 -----------------------------------------------------------~~~~~~~A~~~G~~gn~i~v~ 121 (437) T protein:vir:10 101 -----------------------------------------------------------SDNVTAQAKYSGVRGNDITVT 121 (437) T ss_pred -----------------------------------------------------------ccceEEEeccCCcccceeEEE Confidence 011246788999999999988 Q ss_pred EecCCce-EEEEEeeeccCccceeeeeeeeccccchhHHHHHHHhhcCccceeEEeeeccccccccccccchhhhhhccC Q lcl|Aclame:pro 317 VESKDGA-VTVTITKPESKRGMISEDPLVFKSGDYTNFKMLVDAINNHPFNNVVRARTKPEFEATFTSTLQAAADAKFSG 395 (717) Q Consensus 317 v~~~~~~-~t~~lt~~~~~~~~~~~~~~~l~~g~~~~~~~lv~~IN~~~~~~~~~a~~~~~~~~~l~s~~~~~~~~~ltg 395 (717) |+..-.. ..+.+.... +........+.. ...+ .+ +.+... .++..+. ......|+| T Consensus 122 v~~~~~d~~~~~v~~~~---~~~~~d~~~v~~-----~~~~---~~----n~~v~~----~~~~~l~----~~a~~~LtG 178 (437) T protein:vir:10 122 VKTNVDDPSSFDVVTFL---DTVVMDLQTVKV-----LADL---KN----NALVEF----SGTGELQ----PVAGAKLTG 178 (437) T ss_pred EeeccCCccceEEEEec---Ccceeeeeehhh-----hhhh---hh----hccccc----ccccccc----cccceeeec Confidence 8643211 111221111 111111111111 1111 11 111111 1222221 112357899 Q ss_pred CccCcccchhhhhhhcccccccccchhhhhhhhccccccceeEEeccccCCcccccccchhHHHHHHHHHHHhhccccee Q lcl|Aclame:pro 396 GKDELSLDKEEMYKRLGGEKNEEGFVTKQGAYQYLENYEVDYVIPLGVHADTKLIGKYDDFAYQLALACAVMSHYNSVTI 475 (717) Q Consensus 396 G~dG~~~~a~e~~~al~~~~~~~~~v~~~~~~~~le~~~vd~vi~~~~~a~t~~~~~~~~~~~~~a~~~~~~s~~~~~~i 475 (717) |.||.. +..+|. .++..+|+++++.+.+... .......+..||+.++......+ T Consensus 179 G~dg~~-t~~dy~----------------~al~~le~~~~n~l~~~~~---------d~~~~t~~~~~ik~~r~~~g~~~ 232 (437) T protein:vir:10 179 GTDGAI-STQDYL----------------EYFKALETVEFNYMALPVE---------DASIKKAAINFIKRMREDEGLGA 232 (437) T ss_pred cccCCC-ChhHHH----------------HHHHHhccCcceEEEecCC---------ChhHHHHHHHHHHHHHhccCceE Confidence 999863 222232 2345577888887765421 12356788899998876544444 Q ss_pred EE-ecCCCcchhhHHHHHHHHHHHHhhhhhhhhcccccccccchhhhhccccceeEEEeCcEEEEecccCccee--echh Q lcl|Aclame:pro 476 GI-IPTTTPSDISLAGVEEHVKKLENYANEFYMRDRFGNIIFDADRNKIDLGQFIEVVAGPDFIVRNTRLGQMA--STPD 552 (717) Q Consensus 476 ~i-i~~~~~~~~~~a~v~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~v~~p~~~v~~~~~~~~~~--~p~a 552 (717) .. ++..+... .++. + +.+.... .++..+ ...+ T Consensus 233 ~~V~~~~~~d~-------------------e~Ii---------------------n-~~n~~~~----~~~~~~~~~~~~ 267 (437) T protein:vir:10 233 QLVVADSDADS-------------------EAVI---------------------N-VKNGVIL----SDKTVIDKTKAT 267 (437) T ss_pred EEEeCCCCCCC-------------------ceEE---------------------E-eecceee----cCcceechhhHH Confidence 33 33211100 0000 0 0010000 011111 1237 Q ss_pred HHHHHHHhcCCcccccCCceecccccccccCCHHHHHHHHhCCcEEEEEEcCceEEEEeceecC-----CCCccceeeeh Q lcl|Aclame:pro 553 ASYIGMVSQLKTQSAPTNKPLPSVTALRYTYSANQLNRLTKARFATFKYKQDGSIGVVDAPTSA-----HAGSDYTRLST 627 (717) Q Consensus 553 g~vAGl~A~~gv~~SpaNk~L~gv~~l~~~lt~~e~d~L~~~GI~~ir~~~g~G~~v~g~rTt~-----s~ds~~~~I~v 627 (717) +++||++|++++++|++|+.+.++.++..+|+++|+++|+++|++++++ +++.+++..+.|+. ..+++|++|++ T Consensus 268 a~vAG~~Ag~~~~~S~t~~~~~~~~~v~~~~t~~e~~~~i~~G~~vl~~-~~~~v~i~~gInTltt~~~~~~~~~~ki~v 346 (437) T protein:vir:10 268 VWVAAASANAGVEKSLTYEKYEDSVDVVGRLSHTETEDALLKGQFVFTA-RRGRAVVEQDINSHVSFTIEKNQDFRKNRI 346 (437) T ss_pred HHHHHHhccCccccCccccccCCcccccccCCHHHHHHHHhCCcEEEEE-eCCeEEEEEccccccccCCCCCchhhhhhH Confidence 8999999999999999999999999999999999999999999999965 57778887776552 34678999999 Q ss_pred hhhHHHHHHHHHHHHH-Hhccc-cCCHHHHHHHHHHHHHHHHHHHhCCceecceeeeecChhhhhCCEEEEEEEEEcccc Q lcl|Aclame:pro 628 ARIVKEAVNAVREVAD-PFIGE-PNDTGNRNALTAAVDKRLSKMIENKALLGFDFRLVVTPQQELLGEGSIELSLEAPNE 705 (717) Q Consensus 628 rR~~d~I~~~I~~~~~-~~Ige-pN~~~~~~~i~~~I~~fL~~L~~~GaI~G~~~~~~~t~~~i~~G~l~v~i~v~P~~p 705 (717) +|++|+|.++|++.++ +|||+ ||+...|..|+..|++||++|+++|+|.+|+.++....+....+.+++++.++|+.+ T Consensus 347 ir~~D~i~~di~~~~~~~yiGk~~N~~~~r~~~~~~i~~yl~~l~~~g~I~~~~~~d~~v~~~~~~~~v~v~~~v~~~da 426 (437) T protein:vir:10 347 LRTLDDIVNDTRYAFSEYFLGKVSNNEDGRQAFKANRIRYFKDLEARGAIEDFKVEDIEVLRGELKESVVVNVKVKPVDS 426 (437) T ss_pred HHHHHHHHHHHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCceeEEeecCCCCCEEEEEEEEEEeee Confidence 9999999999999876 69999 699999999999999999999999999999886654444455688999999999999 Q ss_pred ccEEEEEEEEe Q lcl|Aclame:pro 706 LRRLTTIVSLS 716 (717) Q Consensus 706 ~e~I~v~i~~t 716 (717) ||+|++++.+- T Consensus 427 me~iy~ti~v~ 437 (437) T protein:vir:10 427 MEKLYMTVTVE 437 (437) T ss_pred eeeEEEEEEec Confidence 99999999999 No 39 >protein:vir:5833 Length: 742 # NCBI annotation: similar to tail sheath protein # Family: family:all:661 # MgeID: mge:123 # MgeName: RM 378 # Cross-refs: genbank:acc:NP_835619;genbank:gi:30044022 Probab=100.00 E-value=1.9e-51 Score=298.60 Aligned_cols=627 Identities=14% Similarity=0.111 Sum_probs=274.2 Q ss_pred CCceeEEEecCccccCcC-CCCCcceeEEEEEeeccCCc--ccceecCHHHHHHhhCCcccccCCcchHHHHHHHHHHHH Q lcl|Aclame:pro 10 IPGHNARFKDGNLNLKSD-PNPRETESVVLLGTATDGPV--MQPVRVTPETAYNIFGKVAHENGVYNGATLLPKFEELWA 86 (717) Q Consensus 10 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~gp~--~~~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~~~~~~~~ 86 (717) +=-|++.+-|=.. ..+ -++..| .||| |.|=|| --||.||++++||+ |+ ..+.-.+. -. T Consensus 1 ~~~~~~~~~~~~~--~~~~~~~~~~---~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~-------~~~~~~~~-----~~ 61 (742) T protein:vir:58 1 MYRVNVKEVDLSI--TPEVGTPVQT---ALVG-AFDLPIPSELPVSVTPDEFRRV-GS-------TELSLIAD-----SL 61 (742) T ss_pred Ceeeeeeeeeeee--ccccCCchhh---heee-eecCCCCccccceechhHHhhc-cc-------ceeeehhh-----hh Confidence 2223444433222 111 122233 3444 456677 56999999999976 43 12221111 24 Q ss_pred ccCCcEEEEEEecCcceee----e---------------------eecccccccccccCCcccceeecCcccceeecc-C Q lcl|Aclame:pro 87 AGNRDIRLMRTTGVNAVSS----L---------------------LGTSYSKNSKEVAEDKLGGAQARGNVAATFTLP-N 140 (717) Q Consensus 87 ~~~~~~~~~r~~~~~~~~~----~---------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 140 (717) -||...-++|.-|.+..+. + +.+.--+++++.+--.-+ .-|....|...|. | T Consensus 62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 139 (742) T protein:vir:58 62 VGGQEVTVIRPRGETQSLNAAFVVVGGYNVTLGAFNVFYLMFLGYDPQKGYTDVSYVDVQLAG--TPTDTILFSYSLDGS 139 (742) T ss_pred cCcceEEEEccCCcccccceeEEEEecceeeehhhheeeeeeeecccCCCcccceeEEEEEcc--CCCeeEEEeeecCCC Confidence 5666666777665543221 0 011111111111100000 0001111111111 1 Q ss_pred CcceeeeEEEeecceeecCceeEeccccceeeccccccchhheeecCCcccccccceeehhhhhhhh---heeeeeeeEe Q lcl|Aclame:pro 141 GGIVEATFLLKARGVIIPPNNYTLDVGTEEDMKAGTQPTFAQVLLNENVADMESEITVSYEFTYKDA---QGETKTSEVL 217 (717) Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A---~~~~~~gell 217 (717) +..+.- + -+..+.++-+-.+ +. +++.+|+-.-... .++-.+|--+ T Consensus 140 ~~~~~~-~---------------------------~~~~~~~~~~~~~---~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (742) T protein:vir:58 140 STTHSL-T---------------------------INLNAPSVTLPSN---IV-PLFFYYEPYTGSITLQSSVNYSGLTL 187 (742) T ss_pred cceeEE-E---------------------------EEeeceeEeeccc---cc-eeeeEeccccceEEEeeecccCCCcc Confidence 111111 1 1122222211111 11 3333332211110 0111222333 Q ss_pred ecccccccccCc--------------------------ccCCceEEEE---Eeeccccceeee--cCccccccchheecc Q lcl|Aclame:pro 218 DNNTDKDGKPMI--------------------------AKGADVTIKL---EHVALAGLKLYA--DGIEVVDAKAFTVAG 266 (717) Q Consensus 218 d~~ie~~~~p~~--------------------------~~~ag~i~a~---r~~~a~~a~~~~--~g~~~~~s~~~g~~a 266 (717) |-+|.++..|-. .+.-+.++++ .+..-|+..++. ++.--| -..-|..+ T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 266 (742) T protein:vir:58 188 NYTVSKATTPWVYFAEYGTPTSSLTLYKGFYLEGIDLNSFNKQFVVSIENITVNREKGQVLYPSFDVVVHF-RDIRGVSA 266 (742) T ss_pred cceeeeeecCcccccccCCCccceeeeecccccccccCcccceeeEEEeeeeecccCCceeccceeEEEEE-eeccCCCC Confidence 333443333211 0111333333 333334333222 111000 11113333 Q ss_pred ceeEEEEecCccccceEEEEeecccccccccce-EEEeeccc-------cccceE---EEEEecC----CceEEEEEeee Q lcl|Aclame:pro 267 DQLTIHSNSKMKLGASLEAQYAYNLVEVIQPVI-ELESIFGG-------GVYNDI---MRKVESK----DGAVTVTITKP 331 (717) Q Consensus 267 n~i~v~l~d~~~t~~~l~v~~a~~~~~~~~d~i-~l~a~~~G-------~~GN~i---~I~v~~~----~~~~t~~lt~~ 331 (717) |.--|.. -++.+.+..+.-...++ +.+..+.| +.-|+. ++.++.+ .......+. T Consensus 267 ~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~n~~~~~~~~~~~~~~~~~~~~s~~~~-- 335 (742) T protein:vir:58 267 NTEYIRF---------RQVNLNPESPNYIERVIGNMTFEFDGERIVTGGEYPNQVPFLRVVVSQDIKQNVAGVEKWVP-- 335 (742) T ss_pred Cccceee---------eeeecCCCCcceeeecccceeeeeccceeeecccccccccceeeEeccccCcCccceeEEEe-- Confidence 3322210 02222221111111111 33333333 333552 2333221 111111111 Q ss_pred ccCccceeeeeeee-----ccccch---------hHHHHHHHhhcCccceeEEeeecccccccccccc-----chhhhhh Q lcl|Aclame:pro 332 ESKRGMISEDPLVF-----KSGDYT---------NFKMLVDAINNHPFNNVVRARTKPEFEATFTSTL-----QAAADAK 392 (717) Q Consensus 332 ~~~~~~~~~~~~~l-----~~g~~~---------~~~~lv~~IN~~~~~~~~~a~~~~~~~~~l~s~~-----~~~~~~~ 392 (717) ....+...+...++ +.-... .-...++.+..+.......+...+.+.....+.. ....... T Consensus 336 ~~~~~~~~v~d~~~~~~~~~~v~~~~t~~~~~pp~~~~~~e~v~~ngG~~f~v~s~~~~g~~i~~~~as~~~s~ln~~~~ 415 (742) T protein:vir:58 336 VGFEGIYSVGDFTVIVNELTNVSIPVTDSAIIPPMRFTRIEQITLSGGASFSVISNQPYGFNIQDSRHSYWLSPFKDDEL 415 (742) T ss_pred ccccccccccceeeeccccccceeeccccccCCcccccccceeecccCcceEEEEecccCcceeccCcceEEeccCCceE Confidence 00000011110000 000000 0000000111011111101111110000000000 0000000 Q ss_pred ccCCccCcccchhhhhhhcccccccccchhhhhhhhccccccceeEEeccccCCcccccccchhHHHHHHHHHHHh--hc Q lcl|Aclame:pro 393 FSGGKDELSLDKEEMYKRLGGEKNEEGFVTKQGAYQYLENYEVDYVIPLGVHADTKLIGKYDDFAYQLALACAVMS--HY 470 (717) Q Consensus 393 ltgG~dG~~~~a~e~~~al~~~~~~~~~v~~~~~~~~le~~~vd~vi~~~~~a~t~~~~~~~~~~~~~a~~~~~~s--~~ 470 (717) .. |.+... .+.......... .....+........+.. ..|-.+.......... +.........+++....+ .. T Consensus 416 V~-Gt~aa~-~~~d~~t~~~v~-s~~~alp~~a~sv~laG-G~dg~v~v~~~~~D~i-G~~~~~d~~~adrTGL~ALlev 490 (742) T protein:vir:58 416 II-GTELVL-PALDVSTEFGVS-SWEEALPEFSFLMPFQG-GSDGYIRVDENEPDTI-GRVKITPALLANYERLLPLLTE 490 (742) T ss_pred EE-eehhhc-cccccchheecc-ccccccceeeEEEeecC-CccccccccCCCcccc-cccccccccccchhHHHHhhhc Confidence 00 000000 000000000000 00000000000000000 0000000000000000 000000000111111111 12 Q ss_pred ccceeEEecCCCcchhhHHHHHHHHHHHHhhhhhh-hhcccccccccch---hhhhccccceeEEEeCcEEEEecccCcc Q lcl|Aclame:pro 471 NSVTIGIIPTTTPSDISLAGVEEHVKKLENYANEF-YMRDRFGNIIFDA---DRNKIDLGQFIEVVAGPDFIVRNTRLGQ 546 (717) Q Consensus 471 ~~~~i~ii~~~~~~~~~~a~v~~~~~~~~~~~~~~-~~~d~~~~~~~~~---~~~~~~~~~~~~v~~p~~~v~~~~~~~~ 546 (717) ....+.+.|..+..+... .+..+ ++...++. .+.+.+....... .......+.++.++|||+++.++ ... T Consensus 491 ~eVtILiAPG~t~~~v~a-av~A~---la~a~~Rl~vL~D~P~~~tt~~~A~a~r~~~nSsraaly~PwVkv~d~--~~~ 564 (742) T protein:vir:58 491 DQFDLVLTPYLTFADHAG-TVNAF---INRAENRFLYLFDIAGDDDTENLAISLAGYINSSFATTFFPWVRRLTN--KGM 564 (742) T ss_pred CCCcEEEEcCCCchHHHH-HHHHH---HHhhcCCeEEEEecCCCCchHHHHHHHHhccCCceEEEEeceeeeccC--Ccc Confidence 234566677665433322 22222 22222222 2333333222111 11222346789999999987765 456 Q ss_pred eeechhHHHHHHHhcC----CcccccCCceecccccccccCCHHHHHHHHhCCcEEEEEEcCceEEEEeceecCCCCccc Q lcl|Aclame:pro 547 MASTPDASYIGMVSQL----KTQSAPTNKPLPSVTALRYTYSANQLNRLTKARFATFKYKQDGSIGVVDAPTSAHAGSDY 622 (717) Q Consensus 547 ~~~p~ag~vAGl~A~~----gv~~SpaNk~L~gv~~l~~~lt~~e~d~L~~~GI~~ir~~~g~G~~v~g~rTt~s~ds~~ 622 (717) +++|||+++||++|++ |+|+||+|+.+.+. ..+++.|++.||++||++|+++ ++|+++||+||+.+.|++| T Consensus 565 r~vPpSgaIAGL~ARtD~erGvw~SPANrgii~~----~~~s~se~d~LN~~GINtIrsf-G~G~rlWGnRTlassDs~w 639 (742) T protein:vir:58 565 RTVPASLAAYRSIRTTDPETGLAPVGARRGVVTG----EPVRQVDWEDLYNNRINPIVRV-GNDVLLFGQKTMLNVNSAL 639 (742) T ss_pred eeechHHHHHHHHHHhccCCceEecCCcceeeec----cccchhhHHHHhhCCceEEEEC-CCcEEEEcceecCCCCccc Confidence 8899999999999985 69999999865432 2467899999999999999987 7799999999998889999 Q ss_pred eeeehhhhHHHHHHHHHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHhCCceeccee--eeecChhhhhCCEEEEEEEE Q lcl|Aclame:pro 623 TRLSTARIVKEAVNAVREVADPFIGEPNDTGNRNALTAAVDKRLSKMIENKALLGFDF--RLVVTPQQELLGEGSIELSL 700 (717) Q Consensus 623 ~~I~vrR~~d~I~~~I~~~~~~~IgepN~~~~~~~i~~~I~~fL~~L~~~GaI~G~~~--~~~~t~~~i~~G~l~v~i~v 700 (717) +||++||++|+|+++|++.++|++||||++.+|.+|++.|++||++||++|+|.||+| +.+|+|+++++|+++++|++ T Consensus 640 ryInVRRlfd~Ie~SI~~a~q~~VfEPNd~~L~~sIk~sInafL~~L~aqGALlGfrV~lDetNTpeDI~~Gklvv~I~v 719 (742) T protein:vir:58 640 NRINVRRLLIVMRNRISQILSSYLFENNTSENRLRAEALVRQYLESLRLRGAVTDYEVAIDSVTTPTDIDNNTLRARVTV 719 (742) T ss_pred ceEeehhhHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeEEEEcCCCCHHHhhCCEEEEEEEE Confidence 9999999999999999999999999999999999999999999999999999999985 56899999999999999999 Q ss_pred EccccccEEEEEEEEeC Q lcl|Aclame:pro 701 EAPNELRRLTTIVSLSA 717 (717) Q Consensus 701 ~P~~p~e~I~v~i~~ta 717 (717) +|++|+|||+++++++. T Consensus 720 AP~~PAEfI~lrf~it~ 736 (742) T protein:vir:58 720 QPARSIEYIDITFVITP 736 (742) T ss_pred EccCCcceEEEEEEEEe Confidence 99999999999999988 No 40 >protein:vir:10336 Length: 386 # NCBI annotation: ORF39 # Family: family:all:115 # MgeID: mge:182 # MgeName: VHML # Cross-refs: genbank:acc:NP_758931;genbank:gi:27311206;genbank:GeneID:956116 Probab=100.00 E-value=7.5e-53 Score=306.36 Aligned_cols=361 Identities=12% Similarity=0.022 Sum_probs=196.4 Q ss_pred ccccccceEEEEEecCCceEEEEEeeeccCccceeeeeeeeccccchhHHHHHHHhhcCccceeEEeeeccccccccccc Q lcl|Aclame:pro 305 FGGGVYNDIMRKVESKDGAVTVTITKPESKRGMISEDPLVFKSGDYTNFKMLVDAINNHPFNNVVRARTKPEFEATFTST 384 (717) Q Consensus 305 ~~G~~GN~i~I~v~~~~~~~t~~lt~~~~~~~~~~~~~~~l~~g~~~~~~~lv~~IN~~~~~~~~~a~~~~~~~~~l~s~ 384 (717) .+-.....+.|.-....... + .. ....+.....++ -..++ ...+.+...+.. T Consensus 1 M~~~~~~Gv~v~ev~~~~~~---i-------~~--v~tav~~~vg~a--------~~a~~-------~~~~~~~pv~i~- 52 (386) T protein:vir:10 1 MAEQYLHGAEVVEIDNGARP---I-------RT--AQSGVIGLVGTA--------PDADA-------TAFPLNTPVLIA- 52 (386) T ss_pred CccccCCCeEEEEcCCCccc---c-------cc--cCcceeEEEEec--------CCCCC-------cccccccceEec- Confidence 11111111111000000000 0 00 000000000000 00000 000000000000 Q ss_pred cchhhhhhccCCccCcccchhhhhhhcccccccccchhhhhhhhccccccceeEEeccccCCcccccccc---hhHHHHH Q lcl|Aclame:pro 385 LQAAADAKFSGGKDELSLDKEEMYKRLGGEKNEEGFVTKQGAYQYLENYEVDYVIPLGVHADTKLIGKYD---DFAYQLA 461 (717) Q Consensus 385 ~~~~~~~~ltgG~dG~~~~a~e~~~al~~~~~~~~~v~~~~~~~~le~~~vd~vi~~~~~a~t~~~~~~~---~~~~~~a 461 (717) ........-|.+++-. .++.....+.+..... .. ..... +. ..... ...+... .....+. T Consensus 53 --s~~~~~~~~g~~~tl~------~a~~~~~~~gg~~~~v--v~-~~~~~-~~----~~t~~-~~ig~~~~~t~~~tgl~ 115 (386) T protein:vir:10 53 --GSRREAAKLGAGGTLP------QAIDGIFDQTGAVVVV--IR-VDEGV-DS----AATQS-NVIGKVDADTEQYTGIL 115 (386) T ss_pred --chHHHHhhcCCCcchh------HHHHHHhccCceeEEE--ee-ccccc-cc----cccch-hhhcccccccchhhhhH Confidence 0011111122222211 1111111111000000 00 00000 00 00000 0000000 0000110 Q ss_pred HHHHHHh-hcccceeEEecCCCcchhhHHHHHHHHHHHHhhhhhhhhcccccccccc-hhhhhccccceeEEEeCcEEEE Q lcl|Aclame:pro 462 LACAVMS-HYNSVTIGIIPTTTPSDISLAGVEEHVKKLENYANEFYMRDRFGNIIFD-ADRNKIDLGQFIEVVAGPDFIV 539 (717) Q Consensus 462 ~~~~~~s-~~~~~~i~ii~~~~~~~~~~a~v~~~~~~~~~~~~~~~~~d~~~~~~~~-~~~~~~~~~~~~~v~~p~~~v~ 539 (717) ....... ......+...|.........+.++. .+.++... ...+........ ........+.+..+++||+.++ T Consensus 116 ~l~~~~~~~~~~p~i~~ap~~~~~~~v~~~l~~---~~~~~~~~-~~~~~~~~~~~~a~~~~~~~~s~~~~~~~p~~~v~ 191 (386) T protein:vir:10 116 ALLSAENTVKVQPRILIAPGFSNQKAVADQLVS---VADTAAWL-CHSGWSNTTDAAAITYRELFGSRRCEVVDPWYKVW 191 (386) T ss_pred HhhhhcccccccccccccccccchhHHHHHHHH---hhcceEEE-EEeCCCCCchHHHHHhhhcccccceEEecCceeee Confidence 0000000 0000111111111111111111221 11121111 111111111111 0111122467889999999999 Q ss_pred ecccCcceeechhHHHHHHHhcC----CcccccCCceecccccccccC------CHHHHHHHHhCCcEEEEEEcCceEEE Q lcl|Aclame:pro 540 RNTRLGQMASTPDASYIGMVSQL----KTQSAPTNKPLPSVTALRYTY------SANQLNRLTKARFATFKYKQDGSIGV 609 (717) Q Consensus 540 ~~~~~~~~~~p~ag~vAGl~A~~----gv~~SpaNk~L~gv~~l~~~l------t~~e~d~L~~~GI~~ir~~~g~G~~v 609 (717) ++...+.+++|||+++||++|++ |+|+||+|++|.|+.++.+++ ++.|.+.|+++||+++ ++++|+++ T Consensus 192 ~~~~~~~~~~p~s~~~ag~~a~~D~~~G~~~spaN~~l~gv~~~~~~~~~~~~~~~~~~~~l~~~gi~~~--~~~~G~~~ 269 (386) T protein:vir:10 192 DVETSAHIIQPPSARHAGVMAKVHNTLGFWWSNSNQEILGIDGLCRPVDFKLDDPTCRANLLNAKEVTTT--IQQNGFRV 269 (386) T ss_pred ccccccceeechHHHHHHHHHHhhhcCCcEEccCCceeecccccceecccccccCcchhhhhhhcCcEEE--EcCCCEEE Confidence 99988999999999999999985 799999999999999988765 4678899999999988 67899999 Q ss_pred EeceecCCCCccceeeehhhhHHHHHHHHHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHhCCceecceee---eecCh Q lcl|Aclame:pro 610 VDAPTSAHAGSDYTRLSTARIVKEAVNAVREVADPFIGEPNDTGNRNALTAAVDKRLSKMIENKALLGFDFR---LVVTP 686 (717) Q Consensus 610 ~g~rTt~s~ds~~~~I~vrR~~d~I~~~I~~~~~~~IgepN~~~~~~~i~~~I~~fL~~L~~~GaI~G~~~~---~~~t~ 686 (717) ||+||++ .|+.|+||++||++++|+++|++.++||+||||++.+|.+|++.|+.||++||++|+|.||+++ .+|++ T Consensus 270 wG~rT~~-~d~~~~~i~vrR~~~~i~~~~~~~~~~~v~e~~~~~~~~~i~~~i~~~L~~l~~~g~l~g~~v~~d~~~nt~ 348 (386) T protein:vir:10 270 WGDRTCS-ADSKWAFKNVVITNDMIADSLVRNHLWAVDRNITKTYVEDVTEGVNNYLRHLKNIGAIAGGECWVDPELNSP 348 (386) T ss_pred EcccccC-CCcccceeehhhHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeEEEEcccCCCH Confidence 9999984 5889999999999999999999999999999999999999999999999999999999999874 36888 Q ss_pred hhhhCCEEEEEEEEEccccccEEEEEEEEeC Q lcl|Aclame:pro 687 QQELLGEGSIELSLEAPNELRRLTTIVSLSA 717 (717) Q Consensus 687 ~~i~~G~l~v~i~v~P~~p~e~I~v~i~~ta 717 (717) +++.+|+++++|+++|++|+|||++++.++. T Consensus 349 ~~~~~G~~~~~i~~~p~~p~e~i~~~~~~~~ 379 (386) T protein:vir:10 349 DQIQQGKVYFDYDFSAYAPAEHITFRSHMVN 379 (386) T ss_pred HHhhCCeEEEEEEEEecCCceeEEEEEEEeh Confidence 9999999999999999999999999999999 No 41 >protein:vir:79141 Length: 391 # NCBI annotation: major tail seath protein gpFI # Family: family:all:115 # MgeID: mge:1863 # MgeName: RSA1 # Cross-refs: genbank:acc:YP_001165276;genbank:gi:145708101;genbank:GeneID:5247152 Probab=100.00 E-value=1e-52 Score=305.65 Aligned_cols=352 Identities=12% Similarity=0.034 Sum_probs=204.5 Q ss_pred eeccCccceeeeeeeeccccchhHHHHHHHhhcCcccee-EEeee-------ccccccccccccchhhhhhccCCccCcc Q lcl|Aclame:pro 330 KPESKRGMISEDPLVFKSGDYTNFKMLVDAINNHPFNNV-VRART-------KPEFEATFTSTLQAAADAKFSGGKDELS 401 (717) Q Consensus 330 ~~~~~~~~~~~~~~~l~~g~~~~~~~lv~~IN~~~~~~~-~~a~~-------~~~~~~~l~s~~~~~~~~~ltgG~dG~~ 401 (717) +.+....-++... ...+. ..|........ +.... .+.+...+ .....+....-|++|+- T Consensus 1 M~~~~~pGv~v~e--~~~~~--------~~i~~~~tav~~~vg~a~~a~~~~~p~n~pv~---iss~~~~~~~~g~~gtl 67 (391) T protein:vir:79 1 MPTDYHHGVRVVE--LNDGT--------RPIRTIETAVAGIVCTADDADAATFPLDTPVL---LTNPQAYIGKAGDKGTL 67 (391) T ss_pred CCCCCCCCeEEEE--CCCCc--------ccccccCCceEEEEeecccccccccccccCEE---eccHHHHHHhcCCcccc Confidence 1110000000000 00000 00000001111 10100 11111111 11111222334555542 Q ss_pred cchhhhhhhcccccccccchhhhhhhhccccccceeEEeccccCCcccccccch--hHHHHHHHHHHHh-hcccceeEEe Q lcl|Aclame:pro 402 LDKEEMYKRLGGEKNEEGFVTKQGAYQYLENYEVDYVIPLGVHADTKLIGKYDD--FAYQLALACAVMS-HYNSVTIGII 478 (717) Q Consensus 402 ~~a~e~~~al~~~~~~~~~v~~~~~~~~le~~~vd~vi~~~~~a~t~~~~~~~~--~~~~~a~~~~~~s-~~~~~~i~ii 478 (717) ..+-+.+ ..+.+..... .. +...... . .....+.+..+. ..+.+........ ......+... T Consensus 68 ~~al~~~------~~~gg~~~~v--v~-~~~~~~~-----~-~~~~~~~g~~~~~~~~tGl~~l~~~~~~~~~~p~~l~~ 132 (391) T protein:vir:79 68 AHTLDAI------TDQTNPLTVV--VR-VAGGASE-----A-ETTSNLIGTTNAAGRYTGMKALLTARNRFGVAPRILAV 132 (391) T ss_pred chhhhhh------hcccccceee--ec-ccccccc-----c-cccccccccccchhhhHHHhhhhhhhhhhcccchhhcC Confidence 2221111 1110000000 00 0000000 0 000000001100 0011111001000 0001111222 Q ss_pred cCCCcchhhHHHHHHHHHHHHhhhhhhhhcccccccccch--hhhhccccceeEEEeCcEEEEecccCcceeechhHHHH Q lcl|Aclame:pro 479 PTTTPSDISLAGVEEHVKKLENYANEFYMRDRFGNIIFDA--DRNKIDLGQFIEVVAGPDFIVRNTRLGQMASTPDASYI 556 (717) Q Consensus 479 ~~~~~~~~~~a~v~~~~~~~~~~~~~~~~~d~~~~~~~~~--~~~~~~~~~~~~v~~p~~~v~~~~~~~~~~~p~ag~vA 556 (717) |..+ ..+........++++. .+.+++.+....... .......+.+..+++||+.++++...+.+++|||+++| T Consensus 133 p~~~----~~~v~~al~~~~~~~~-~~ai~d~p~~~t~~~a~~~~~~~~s~~~a~~~P~~~~~d~~~~~~~~~p~s~~~A 207 (391) T protein:vir:79 133 PGLD----SLPVGTELVTIAQKLR-AFAYLSAYGCQTKEEAVAYRSNFGQREAMVMWPDFVGWDTAANAETTLWATARAV 207 (391) T ss_pred Cccc----hhHHHHHHHHHHhhcC-cEEEEECCCCCCHHHHHHHHhccCCceeEEecceeeeecCcCCceeeechHHHHH Confidence 2222 1222223333333333 234555544322221 11112246788999999999999888899999999999 Q ss_pred HHHhcC----CcccccCCceecccccccccCCHH------HHHHHHhCCcEEEEEEcCceEEEEeceecCCCCccceeee Q lcl|Aclame:pro 557 GMVSQL----KTQSAPTNKPLPSVTALRYTYSAN------QLNRLTKARFATFKYKQDGSIGVVDAPTSAHAGSDYTRLS 626 (717) Q Consensus 557 Gl~A~~----gv~~SpaNk~L~gv~~l~~~lt~~------e~d~L~~~GI~~ir~~~g~G~~v~g~rTt~s~ds~~~~I~ 626 (717) |++|++ |+|+||+|+.|.|+.++.++++.. |.+.||.+||+++ ++++|+++||+||++ .|+.|+||+ T Consensus 208 G~~a~~D~~~g~~~spaN~~l~gi~~~~~~~~~~~~~~~~~~~~Ln~~~I~t~--~~~~G~~~wG~rT~~-~d~~~~~i~ 284 (391) T protein:vir:79 208 GLRAKIDNDTGWHKTLSNVAVGGVTGLSRDVFWDLQDPATDAGYLNANEVTTL--VHRDGYRFWGSRTCS-ADPLFAFEN 284 (391) T ss_pred HHHHHhhhcccceeccCCceehhhhccccccccccccccchhhhhhhcCceEE--ECCCcEEEEcccccC-CCcccceee Confidence 999975 699999999999999999877644 4578999999998 467899999999985 588999999 Q ss_pred hhhhHHHHHHHHHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHhCCceecceee---eecChhhhhCCEEEEEEEEEcc Q lcl|Aclame:pro 627 TARIVKEAVNAVREVADPFIGEPNDTGNRNALTAAVDKRLSKMIENKALLGFDFR---LVVTPQQELLGEGSIELSLEAP 703 (717) Q Consensus 627 vrR~~d~I~~~I~~~~~~~IgepN~~~~~~~i~~~I~~fL~~L~~~GaI~G~~~~---~~~t~~~i~~G~l~v~i~v~P~ 703 (717) +||++++|+++|++.++||+||||++.+|.+|++.|+.||++||++|+|.||+++ ++|+++++.+|+++++|+++|+ T Consensus 285 ~rR~~~~i~~~i~~~~~~~v~epn~~~~~~~i~~~i~~~l~~l~~~g~l~g~~v~~~~~~nt~~~i~~G~~~~~i~~~p~ 364 (391) T protein:vir:79 285 YTRTAQVLADTMAEAHMWANDLPMTPTLVRDLLEGINAKLRMLTRNGYLLGGAAWFDADANSKDTLKAGQLAIDYDYTPV 364 (391) T ss_pred hhhHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCceeceEEEEecCCCCHHHhhCCEEEEEEEEEec Confidence 9999999999999999999999999999999999999999999999999999853 4688899999999999999999 Q ss_pred ccccEEEEEEEEeC Q lcl|Aclame:pro 704 NELRRLTTIVSLSA 717 (717) Q Consensus 704 ~p~e~I~v~i~~ta 717 (717) +|+|||++++.+.. T Consensus 365 ~p~e~i~~~~~~~~ 378 (391) T protein:vir:79 365 PPLENLTFRQRITD 378 (391) T ss_pred CCcceEEEEEEEch Confidence 99999999999988 No 42 >protein:vir:1172 Length: 391 # NCBI annotation: hypothetical protein # Family: family:all:115 # MgeID: mge:24 # MgeName: phi CTX # Cross-refs: genbank:acc:NP_490621;genbank:gi:17313241;genbank:GeneID:927300 Probab=100.00 E-value=7.8e-52 Score=300.77 Aligned_cols=351 Identities=11% Similarity=0.051 Sum_probs=199.3 Q ss_pred eccccccceEEEEEecCCceEEEEEeeeccCccceeeeeeeeccccchhHHHHHHHhhcCccceeEEeeeccccc---cc Q lcl|Aclame:pro 304 IFGGGVYNDIMRKVESKDGAVTVTITKPESKRGMISEDPLVFKSGDYTNFKMLVDAINNHPFNNVVRARTKPEFE---AT 380 (717) Q Consensus 304 ~~~G~~GN~i~I~v~~~~~~~t~~lt~~~~~~~~~~~~~~~l~~g~~~~~~~lv~~IN~~~~~~~~~a~~~~~~~---~~ 380 (717) ..+-.. .--|.+. +...+... |..-......-....++.+ .. T Consensus 1 M~~~~~--~~GV~v~-------------e~~~~~~~--------------------i~~v~tavig~vg~a~~a~~~~~~ 45 (391) T protein:vir:11 1 MAADQY--HHGVRVQ-------------EINDGTRP--------------------IRTIATAIIGLVATAEDADATAFP 45 (391) T ss_pred CCCCcC--CCcEEEE-------------ECCCCcce--------------------ecccCCceeEEEEecCCCCCcccc Confidence 100000 0000000 00000000 0000000000000000000 00 Q ss_pred cccc--cchhhhhhccCCccCcccchhhhhhhcccccccccchhhhhhhhccccccceeEEeccccCCc-----cccccc Q lcl|Aclame:pro 381 FTST--LQAAADAKFSGGKDELSLDKEEMYKRLGGEKNEEGFVTKQGAYQYLENYEVDYVIPLGVHADT-----KLIGKY 453 (717) Q Consensus 381 l~s~--~~~~~~~~ltgG~dG~~~~a~e~~~al~~~~~~~~~v~~~~~~~~le~~~vd~vi~~~~~a~t-----~~~~~~ 453 (717) +..+ ...........|++++ ++.++.....+.+... .++......+. ...+.. T Consensus 46 ~~~p~~v~s~~~~~~~~g~~~t------l~~al~~~~~~~g~~~--------------~vv~~~~~~~~~~t~~d~~g~~ 105 (391) T protein:vir:11 46 LDTPVLITNVQAAIGKAGTSGT------LPASLQAIADQANAAT--------------VVVRVKPGEDEAATNSAVIGGV 105 (391) T ss_pred ccccEEEecchhhheecCCCcc------chhhhhhhhcccccee--------------EEeeecccccccccchhhhccc Confidence 0000 0011111122233332 1111111111110000 00000000000 000000 Q ss_pred chh--HHHHHHHHHHH-hhcccceeEEecCCCcchhhHHHHHHHHHHHHhhhhhhhhcccccccccch-h-hhhccccce Q lcl|Aclame:pro 454 DDF--AYQLALACAVM-SHYNSVTIGIIPTTTPSDISLAGVEEHVKKLENYANEFYMRDRFGNIIFDA-D-RNKIDLGQF 528 (717) Q Consensus 454 ~~~--~~~~a~~~~~~-s~~~~~~i~ii~~~~~~~~~~a~v~~~~~~~~~~~~~~~~~d~~~~~~~~~-~-~~~~~~~~~ 528 (717) +.. ........... .......+...|..... +........++++ ..+.+++.+....... . ......+.| T Consensus 106 ~a~~~~~g~~a~~~~~~~~~~~p~~~~ap~~~~~----~v~~al~~~~~~~-~~~~i~D~p~~~t~~~a~~~r~~~~s~~ 180 (391) T protein:vir:11 106 SADGKYTGMKALLAAKARLGVVPRILGVPGLDTQ----PVATALIAIAQQL-RAFAYVSASGCKTKEEATAYRENFAARE 180 (391) T ss_pred ccccchhhhhhhhhhhhhheeccccccccccccH----HHHHHHHHhhccc-ceEEEEEcCCCCCHHHHHHHhhhcCCce Confidence 000 00000000000 00001111122222211 1112222223333 3344555443321111 1 111223578 Q ss_pred eEEEeCcEEEEecccCcceeechhHHHHHHHhcC----CcccccCCceecccccccccCC------HHHHHHHHhCCcEE Q lcl|Aclame:pro 529 IEVVAGPDFIVRNTRLGQMASTPDASYIGMVSQL----KTQSAPTNKPLPSVTALRYTYS------ANQLNRLTKARFAT 598 (717) Q Consensus 529 ~~v~~p~~~v~~~~~~~~~~~p~ag~vAGl~A~~----gv~~SpaNk~L~gv~~l~~~lt------~~e~d~L~~~GI~~ 598 (717) ..+++||++++++.....+++|||+++||++|++ |+|+||+|++|.|+.++..+++ +.|.+.||++||++ T Consensus 181 ~~~~~p~~~~~~~~~~~~~~~p~s~~~ag~~a~~d~~~g~~~span~~l~gi~~~~~~~~~~~~~~~~~~~~Ln~~gi~~ 260 (391) T protein:vir:11 181 AMVIWPDFLTWSTVVNQTVPAPAVAQALGLRARIDQEVGWHKTLSNVAVNGVTGISADVFWDLQSPSTDANYLNENEVTT 260 (391) T ss_pred EEEEcCcceecccccCceEEechHHHHHHHHHHhhccCCcEEccCCceeeceeecccccccccCCCcchhhhhhhcCcEE Confidence 8999999999999888899999999999999874 7999999999999999887764 56889999999999 Q ss_pred EEEEcCceEEEEeceecCCCCccceeeehhhhHHHHHHHHHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHhCCceecc Q lcl|Aclame:pro 599 FKYKQDGSIGVVDAPTSAHAGSDYTRLSTARIVKEAVNAVREVADPFIGEPNDTGNRNALTAAVDKRLSKMIENKALLGF 678 (717) Q Consensus 599 ir~~~g~G~~v~g~rTt~s~ds~~~~I~vrR~~d~I~~~I~~~~~~~IgepN~~~~~~~i~~~I~~fL~~L~~~GaI~G~ 678 (717) + ++++|+++||+||++ .|+.|+||++||++|+|+++|++.++|++||||++.+|.+|++.|+.||++||++|+|.|| T Consensus 261 ~--~~~~G~~~wG~rT~~-~d~~~~~i~vrR~~~~i~~~~~~~~~~~v~e~n~~~~~~~i~~~i~~~l~~l~~~g~l~g~ 337 (391) T protein:vir:11 261 L--VQEGGFRFWGSRTCS-DDPLFAFENYTRTAQVLADTIAEAHMWAVDKPMHPSLVRDILEGVNAKFRELKGLGLIIDA 337 (391) T ss_pred E--EcCCCEEEEcccccC-CCcccceeehhhHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhccceece Confidence 8 568899999999985 5889999999999999999999999999999999999999999999999999999999999 Q ss_pred eee---eecChhhhhCCEEEEEEEEEccccccEEEEEEEEeC Q lcl|Aclame:pro 679 DFR---LVVTPQQELLGEGSIELSLEAPNELRRLTTIVSLSA 717 (717) Q Consensus 679 ~~~---~~~t~~~i~~G~l~v~i~v~P~~p~e~I~v~i~~ta 717 (717) +++ ++|+++++.+|+++++|+++|++|+|||++++.+.. T Consensus 338 ~~~~~~~~n~~~~i~~G~~~~~i~~~p~~p~e~i~~~~~~~~ 379 (391) T protein:vir:11 338 QAWYDPNVNDKDTLKAGKLRITYDYTPVPPLEDLTFFQKITD 379 (391) T ss_pred EEEEecCCCCHHHhhCCeEEEEEEEEecCCcceEEEEEEEch Confidence 853 468889999999999999999999999999999998 No 43 >protein:vir:105470 Length: 451 # NCBI annotation: putative phage sheath tail protein # Family: family:all:632 # MgeID: mge:1502 # MgeName: KC5a # Cross-refs: genbank:acc:YP_529880;genbank:gi:90592620;genbank:GeneID:3974534 Probab=100.00 E-value=4e-48 Score=280.43 Aligned_cols=435 Identities=13% Similarity=0.150 Sum_probs=277.3 Q ss_pred CCcc---hhcccCCceeEEEecCccccCcCCCCCcceeEEEEEeeccCCcccceec-CHHHHHHhhCCcccccCCcchHH Q lcl|Aclame:pro 1 MAGF---DQYQAIPGHNARFKDGNLNLKSDPNPRETESVVLLGTATDGPVMQPVRV-TPETAYNIFGKVAHENGVYNGAT 76 (717) Q Consensus 1 ~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~gp~~~~~~~-~~~~~~~~fg~~~~~~~~~~~~~ 76 (717) |+|. .|=.-+||+||+|+..+. .+..+.+|+.++.||.+.+||.-+||.| +.+++++.||... .+.+ T Consensus 1 magg~~~~~~K~~PGvYi~~~~~~~---~~~~~~~~~~~~~i~~~~~~g~~~~v~i~~~~d~~~~fG~~~-----~~~~- 71 (451) T protein:vir:10 1 MAGGTWKAQDKRRPGTYINVVGNGQ---REAASSLGRVLLIRDKGLGWGKNGVIEVEANSDFTKKLGTTL-----DDPS- 71 (451) T ss_pred CCceeeccceeecCceEEEEeccCc---ceeeccCCcEEEEEeeecCCCCcccEEeecHHHHHHHcCCcc-----cchh- Confidence 9984 344459999999999887 6788999999999997665433668888 6777899999531 1221 Q ss_pred HHHHHHHHHHccCCcEEEEEEecCcceeeeeecccccccccccCCcccceeecCcccceeeccCCcceeeeEEEeeccee Q lcl|Aclame:pro 77 LLPKFEELWAAGNRDIRLMRTTGVNAVSSLLGTSYSKNSKEVAEDKLGGAQARGNVAATFTLPNGGIVEATFLLKARGVI 156 (717) Q Consensus 77 ~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (717) ..+..+|+ +|++.+++.|+.+-+... + T Consensus 72 -~~~~~~~~-~g~~~v~~yrl~~g~~a~-----------------------~---------------------------- 98 (451) T protein:vir:10 72 -LTALKETL-KGASKVLVLNPNEGTAAT-----------------------L---------------------------- 98 (451) T ss_pred -HHHHHHHh-cCCcEEEEEEcCCCceEE-----------------------E---------------------------- Confidence 12333344 589999999986221000 0 Q ss_pred ecCceeEeccccceeeccccccchhheeecCCcccccccceeehhhhhhhhheeeeeeeEeecccccccccCcccCCceE Q lcl|Aclame:pro 157 IPPNNYTLDVGTEEDMKAGTQPTFAQVLLNENVADMESEITVSYEFTYKDAQGETKTSEVLDNNTDKDGKPMIAKGADVT 236 (717) Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~gelld~~ie~~~~p~~~~~ag~i 236 (717) ++ + T Consensus 99 ------t~-----------------------------------------------------~------------------ 101 (451) T protein:vir:10 99 ------TK-----------------------------------------------------E------------------ 101 (451) T ss_pred ------Ee-----------------------------------------------------e------------------ Confidence 00 0 Q ss_pred EEEEeeccccceeeecCccccccchheeccceeEEEEecCccccceEEEEeecccccccccceEEEeeccccccceEEEE Q lcl|Aclame:pro 237 IKLEHVALAGLKLYADGIEVVDAKAFTVAGDQLTIHSNSKMKLGASLEAQYAYNLVEVIQPVIELESIFGGGVYNDIMRK 316 (717) Q Consensus 237 ~a~r~~~a~~a~~~~~g~~~~~s~~~g~~an~i~v~l~d~~~t~~~l~v~~a~~~~~~~~d~i~l~a~~~G~~GN~i~I~ 316 (717) . +.++++|+|||+|||+|+|+ T Consensus 102 --------------~---------------------------------------------~~~~~~Aky~G~~Gn~i~v~ 122 (451) T protein:vir:10 102 --------------G---------------------------------------------LPWTVTANYPGEKGNQITVS 122 (451) T ss_pred --------------c---------------------------------------------CceEEEEeeCCcCCceEEEE Confidence 0 00124588999999999998 Q ss_pred EecCCce-EEEEEeeeccCccceeeeeeeeccccchhHHHHHHHhhcCccceeEEeeeccccccccccccchhhhhhccC Q lcl|Aclame:pro 317 VESKDGA-VTVTITKPESKRGMISEDPLVFKSGDYTNFKMLVDAINNHPFNNVVRARTKPEFEATFTSTLQAAADAKFSG 395 (717) Q Consensus 317 v~~~~~~-~t~~lt~~~~~~~~~~~~~~~l~~g~~~~~~~lv~~IN~~~~~~~~~a~~~~~~~~~l~s~~~~~~~~~ltg 395 (717) |+..-.. ..+.+.... ++......... +.+ +++...+.++.+....++...... ...+++ T Consensus 123 v~~~~~d~~~~~v~t~~---g~~~vd~qtv~---~~~-------~~el~~nd~V~a~~~~~g~~~~~~------~~~l~~ 183 (451) T protein:vir:10 123 VEVSPADQNAATVSTIF---GTKLVDEQSIK---FNE-------LDKFKGNDYITAKVVEEGSSKPVA------FTNVSG 183 (451) T ss_pred EecccCCcCceEEEEEE---CCeEEEEEEee---ccc-------hhhccCCceEEEEeccccccccee------eeeccc Confidence 8543211 112222111 11111111101 111 222223334434332232221111 122333 Q ss_pred Ccc-CcccchhhhhhhcccccccccchhhhhhhhccccccceeEEeccccCCcccccccchhHHHHHHHHHHHhhc-ccc Q lcl|Aclame:pro 396 GKD-ELSLDKEEMYKRLGGEKNEEGFVTKQGAYQYLENYEVDYVIPLGVHADTKLIGKYDDFAYQLALACAVMSHY-NSV 473 (717) Q Consensus 396 G~d-G~~~~a~e~~~al~~~~~~~~~v~~~~~~~~le~~~vd~vi~~~~~a~t~~~~~~~~~~~~~a~~~~~~s~~-~~~ 473 (717) |.+ |+...+++.|. ..+..+|++.++.+.+.....+ ..++..+..||+.++.. +.. T Consensus 184 ~~~gg~~~~~~~~~~---------------~~l~~~e~~~~n~l~~~~~~~~-------~~i~~~~~a~ik~~r~~~g~~ 241 (451) T protein:vir:10 184 TLTGGTTTESNKVES---------------LLNDALENEEYAVVTTAGFEPS-------SNMNKLVVEAVKRLRENEGRK 241 (451) T ss_pred ccccccccCCccchH---------------HHHHHhccceeeEEEEccCCCc-------hHHHHHHHHHHHHHHHhcCCe Confidence 322 23223333221 1234578888887654332111 22466778899888643 344 Q ss_pred eeEEecCCCcchhhHHHHHHHHHHHHhhhhhhhhcccccccccchhhhhccccceeEEEeCcEEEEecccCcceee--ch Q lcl|Aclame:pro 474 TIGIIPTTTPSDISLAGVEEHVKKLENYANEFYMRDRFGNIIFDADRNKIDLGQFIEVVAGPDFIVRNTRLGQMAS--TP 551 (717) Q Consensus 474 ~i~ii~~~~~~~~~~a~v~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~v~~p~~~v~~~~~~~~~~~--p~ 551 (717) ...+++..+... .+.++ .+++ .+.... .++..+- -. T Consensus 242 ~~aVl~~~~~~~------------------------------~d~eg-------iinv-~n~~~~----~dg~~~~~~~~ 279 (451) T protein:vir:10 242 VRGVIPTDADTT------------------------------YNYEG-------ISTV-VNGYTL----SDGTNVDVKDA 279 (451) T ss_pred EEEEecCccCCC------------------------------CCCcc-------eEEe-ecceEe----cCceeechhhh Confidence 445554322110 00000 0111 111110 1111111 13 Q ss_pred hHHHHHHHhcCCcccccCCceecccccccccCCHHHHHHHHhCCcEEEEEEcCceEEEEeceec-----CCCCccceeee Q lcl|Aclame:pro 552 DASYIGMVSQLKTQSAPTNKPLPSVTALRYTYSANQLNRLTKARFATFKYKQDGSIGVVDAPTS-----AHAGSDYTRLS 626 (717) Q Consensus 552 ag~vAGl~A~~gv~~SpaNk~L~gv~~l~~~lt~~e~d~L~~~GI~~ir~~~g~G~~v~g~rTt-----~s~ds~~~~I~ 626 (717) ++++||++|++++++|++|+.+.++.++..+|+++|++.+.++|.++++..++++++|..++++ ...+.+|++|+ T Consensus 280 ~~~vAG~~Ag~~~~~S~T~~~~~~~~~v~~~~t~~e~~~~i~~G~lvl~~~~g~~v~i~~~INTltt~~~~k~~~~~ki~ 359 (451) T protein:vir:10 280 TGYFAGISASADVATSLTYFEVEDAVSAYPKFDNEKTIKALDAGQIVFTTRPGQRVVIEQDINSLHKFTAEKPQAFSKNR 359 (451) T ss_pred HHHHHHHHcccccccCccceecCCceeeeeeCCHHHHHHHHhCCeEEEEEEcCCeEEEEEccccceecCCCCCcchhhhh Confidence 6899999999999999999999999999999999999999999999998778888999888765 23467899999 Q ss_pred hhhhHHHHHHHHHHHHH-Hhccc-cCCHHHHHHHHHHHHHHHHHHHhCCceecceeeeecChhhhhCCEEEEEEEEEccc Q lcl|Aclame:pro 627 TARIVKEAVNAVREVAD-PFIGE-PNDTGNRNALTAAVDKRLSKMIENKALLGFDFRLVVTPQQELLGEGSIELSLEAPN 704 (717) Q Consensus 627 vrR~~d~I~~~I~~~~~-~~Ige-pN~~~~~~~i~~~I~~fL~~L~~~GaI~G~~~~~~~t~~~i~~G~l~v~i~v~P~~ 704 (717) ++|++|+|.++|++.++ .|||+ ||+...|..|++.|++||++|+++|+|.+|...+....+....+.+++++.++|+. T Consensus 360 vir~~D~i~~di~~~~~~~yiGk~~N~~~gr~~~~~~i~~yl~~l~~~g~i~~~~~~d~~v~~~~~~~~v~v~~~v~pvd 439 (451) T protein:vir:10 360 VIRTLDEIATNTENTFERTYLGNVGNNAAGRDLFKADRIAYLTSLQNRNMIQSFANTDITVEAGNDMDSIVVNLAVTPVD 439 (451) T ss_pred HHHHHHHHHHHHHHHhhhccceecCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCccceEEeecCCCCEEEEEEEEEEEe Confidence 99999999999999987 59998 69999999999999999999999999999875332222334567899999999999 Q ss_pred cccEEEEEEEEe Q lcl|Aclame:pro 705 ELRRLTTIVSLS 716 (717) Q Consensus 705 p~e~I~v~i~~t 716 (717) .||+|++++.+- T Consensus 440 ame~iy~t~~v~ 451 (451) T protein:vir:10 440 AMEKLYMTMVVR 451 (451) T ss_pred eeeeEEEEEEEc Confidence 999999999999 No 44 >protein:vir:78986 Length: 436 # NCBI annotation: putative sheath tail protein # Family: family:all:632 # MgeID: mge:1861 # MgeName: phiC2 # Cross-refs: genbank:acc:YP_001110731;genbank:gi:134287348;genbank:GeneID:4955160 Probab=100.00 E-value=6.6e-44 Score=257.32 Aligned_cols=416 Identities=16% Similarity=0.163 Sum_probs=280.4 Q ss_pred CCcc---hhcccCCceeEEEecCccccCcCCCCCcceeEEEEEeeccCCcccceecCHH----HHHHhhCCcccccCCcc Q lcl|Aclame:pro 1 MAGF---DQYQAIPGHNARFKDGNLNLKSDPNPRETESVVLLGTATDGPVMQPVRVTPE----TAYNIFGKVAHENGVYN 73 (717) Q Consensus 1 ~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~gp~~~~~~~~~~----~~~~~fg~~~~~~~~~~ 73 (717) |+|. .|=.-+||+|++|+-..- ........-.+.+...+-|||+++|+-|+.+ +..+.||.. +. T Consensus 3 magg~~~~~~K~~PG~Y~n~~~~~~---~~~~~~~rGi~a~p~~~~wGp~~~v~~i~~~~~~~~~~~~~G~~------~~ 73 (436) T protein:vir:78 3 LGGGTFVTQNKVLPGSYINFVSATR---ATSSLSDRGIVAMPLELDWGIDEEVFQVTSDDFEKYSTKYFGYD------YT 73 (436) T ss_pred ccceeeccceeecCceEEEEEecCc---ceeeccCCeEEEEEEEecCCCCceeEEeecccchHHHHHHhcCc------cc Confidence 8873 344569999999995444 5667788889999999999999999999754 457789952 11 Q ss_pred hHHHHHHHHHHHHccCCcEEEEEEecCcceeeeeecccccccccccCCcccceeecCcccceeeccCCcceeeeEEEeec Q lcl|Aclame:pro 74 GATLLPKFEELWAAGNRDIRLMRTTGVNAVSSLLGTSYSKNSKEVAEDKLGGAQARGNVAATFTLPNGGIVEATFLLKAR 153 (717) Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (717) .-.| ....+++ .|.+-+++.|+.+ |..+ + T Consensus 74 ~~~~-~~l~~~~-~~~~tv~~yrl~~------------------------------G~~a-~------------------ 102 (436) T protein:vir:78 74 HEKL-KGLRDLF-KNIRLGYFYKLNK------------------------------GVKA-S------------------ 102 (436) T ss_pred hHHH-HHHHHHh-cCCCEEEEEECCC------------------------------ccee-e------------------ Confidence 1111 1222344 4666677777640 0000 0 Q ss_pred ceeecCceeEeccccceeeccccccchhheeecCCcccccccceeehhhhhhhhheeeeeeeEeecccccccccCcccCC Q lcl|Aclame:pro 154 GVIIPPNNYTLDVGTEEDMKAGTQPTFAQVLLNENVADMESEITVSYEFTYKDAQGETKTSEVLDNNTDKDGKPMIAKGA 233 (717) Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~gelld~~ie~~~~p~~~~~a 233 (717) + T Consensus 103 -----------------------------------------------------------------~-------------- 103 (436) T protein:vir:78 103 -----------------------------------------------------------------C-------------- 103 (436) T ss_pred -----------------------------------------------------------------e-------------- Confidence 0 Q ss_pred ceEEEEEeeccccceeeecCccccccchheeccceeEEEEecCccccceEEEEeecccccccccceEEEeeccccccceE Q lcl|Aclame:pro 234 DVTIKLEHVALAGLKLYADGIEVVDAKAFTVAGDQLTIHSNSKMKLGASLEAQYAYNLVEVIQPVIELESIFGGGVYNDI 313 (717) Q Consensus 234 g~i~a~r~~~a~~a~~~~~g~~~~~s~~~g~~an~i~v~l~d~~~t~~~l~v~~a~~~~~~~~d~i~l~a~~~G~~GN~i 313 (717) + .++|+|+|.+||.| T Consensus 104 --------------~---------------------------------------------------v~~Aky~g~~gn~i 118 (436) T protein:vir:78 104 --------------S---------------------------------------------------IATARCSGIRGNDL 118 (436) T ss_pred --------------e---------------------------------------------------eeeeecCCCCCcEE Confidence 0 01456888888888 Q ss_pred EEEEecCC-ceEEEEEeeeccCccceeeeeeeeccccchhHHHHHHHhhcCccceeEEeeeccccccccccccchhhhhh Q lcl|Aclame:pro 314 MRKVESKD-GAVTVTITKPESKRGMISEDPLVFKSGDYTNFKMLVDAINNHPFNNVVRARTKPEFEATFTSTLQAAADAK 392 (717) Q Consensus 314 ~I~v~~~~-~~~t~~lt~~~~~~~~~~~~~~~l~~g~~~~~~~lv~~IN~~~~~~~~~a~~~~~~~~~l~s~~~~~~~~~ 392 (717) +|.|+..- ....+.+.... ....+ . ...+..+++...+.++.... +.. +....... T Consensus 119 ~v~v~~~~~d~~~~dv~~~~--------g~~~~----d---~~~~~~~~~l~~n~~V~~~~----~g~----la~~a~~~ 175 (436) T protein:vir:78 119 KVIVTTNIDDNAKFDVVTLL--------DNKKV----D---TQIAKVITELQDNDYVTWKK----EAT----LEATAGLT 175 (436) T ss_pred EEEecccccccCceEEEEEe--------cchhh----h---hhhHHHHhhccCCceEEEEe----ccc----ccccceee Confidence 88875431 11111111111 00000 0 12344566555555554431 111 22223467 Q ss_pred ccCCccCcccchhhhhhhcccccccccchhhhhhhhccccccceeEEeccccCCcccccccchhHHHHHHHHHHHhhc-c Q lcl|Aclame:pro 393 FSGGKDELSLDKEEMYKRLGGEKNEEGFVTKQGAYQYLENYEVDYVIPLGVHADTKLIGKYDDFAYQLALACAVMSHY-N 471 (717) Q Consensus 393 ltgG~dG~~~~a~e~~~al~~~~~~~~~v~~~~~~~~le~~~vd~vi~~~~~a~t~~~~~~~~~~~~~a~~~~~~s~~-~ 471 (717) |+||.||...+..+|.++ +..+|++.++.+.+... .......++.|++.++.. + T Consensus 176 LtGG~dG~~~T~~dy~~a----------------l~~le~~~fn~l~~~~~---------d~~~~~~~~a~ikr~re~~g 230 (436) T protein:vir:78 176 FTNGTNGEAVTGTEYQAF----------------LDKIESYSFNALGCLAT---------TAEIKSLFVEFTKRMRDKVG 230 (436) T ss_pred eeccccccccchHHHHHH----------------HHHHcccceeEEEecCC---------ChHHHHHHHHHHHHHHhhcC Confidence 999999986655555443 34578888987765432 123467788888887643 2 Q ss_pred cceeEEecCCCcchhhHHHHHHHHHHHHhhhhhhhhcccccccccchhhhhccccceeEEEeCcEEEEecccCcceeec- Q lcl|Aclame:pro 472 SVTIGIIPTTTPSDISLAGVEEHVKKLENYANEFYMRDRFGNIIFDADRNKIDLGQFIEVVAGPDFIVRNTRLGQMAST- 550 (717) Q Consensus 472 ~~~i~ii~~~~~~~~~~a~v~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~v~~p~~~v~~~~~~~~~~~p- 550 (717) +....+++..+..+ .++ -+++ .....+..+.| T Consensus 231 ~~~~aV~~~~~~~d--------------------------------~Eg-------IInv--------~n~v~g~~~~~~ 263 (436) T protein:vir:78 231 AKFQTVLYKKNDAD--------------------------------YEG-------VVSV--------ENKIKDTGLLES 263 (436) T ss_pred CeEEEEecCCCCCC--------------------------------Cce-------EEEe--------ecccCCceechh Confidence 22223332211111 000 0000 00112222222 Q ss_pred -hhHHHHHHHhcCCcccccCCceecccccccccCCHHHHHHHHhCCcEEEEEEcCceEEEEeceec-----CCCCcccee Q lcl|Aclame:pro 551 -PDASYIGMVSQLKTQSAPTNKPLPSVTALRYTYSANQLNRLTKARFATFKYKQDGSIGVVDAPTS-----AHAGSDYTR 624 (717) Q Consensus 551 -~ag~vAGl~A~~gv~~SpaNk~L~gv~~l~~~lt~~e~d~L~~~GI~~ir~~~g~G~~v~g~rTt-----~s~ds~~~~ 624 (717) .++++||++|++++.+|++|+.+.++.++..+|+++|++++.++|..++++ .+++++|..++|+ ...+.+|++ T Consensus 264 ~~~a~vAG~~Ag~~~~~S~T~~~~~~~~~v~~~~t~~e~~~ai~~G~lvl~~-d~~~v~I~~~VNTltt~~~~k~~~~~k 342 (436) T protein:vir:78 264 SLIYWTTGAIAGCDINKSNTNKRYDGEFDVDVNYTQIHLEEALKTGKFIFHK-VGDEVHVLEDINTFVSFTDEKNDDFSS 342 (436) T ss_pred HHHHHHHHHHhcCccccCccceecCccccccccCCHHHHHHHHhCCeEEEEE-eCCeEEEEEccccceecCCCCCcchhh Confidence 478999999999999999999999999999999999999999999999974 6788999999876 245678999 Q ss_pred eehhhhHHHHHHHHHHHHH-Hhccc-cCCHHHHHHHHHHHHHHHHHHHhCCceecceeeeecChhhhhCCEEEEEEEEEc Q lcl|Aclame:pro 625 LSTARIVKEAVNAVREVAD-PFIGE-PNDTGNRNALTAAVDKRLSKMIENKALLGFDFRLVVTPQQELLGEGSIELSLEA 702 (717) Q Consensus 625 I~vrR~~d~I~~~I~~~~~-~~Ige-pN~~~~~~~i~~~I~~fL~~L~~~GaI~G~~~~~~~t~~~i~~G~l~v~i~v~P 702 (717) |+++|++|+|.++|++.++ .|||+ ||+...|..|+..|++||++|+++|+|.+|..++....+......+++++.++| T Consensus 343 I~vir~~D~i~~di~~~~~~~yiGKv~N~~dgr~~l~~~i~~yl~~L~~~g~I~~f~~~Dv~v~~~~~~~~v~v~~~v~p 422 (436) T protein:vir:78 343 NQSVRVLDQIANDIATLFNTKYLGEVPNDKSGRISFWNDVVKHHEQLQNMRAIEDFKADDVSVEPGSDKKTVVVSDAVKV 422 (436) T ss_pred hhHHHHHHHHHHHHHHHhhhccccccCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEeecCCCCEEEEEEEEEE Confidence 9999999999999999875 69998 699999999999999999999999999999865433333345678999999999 Q ss_pred cccccEEEEEEEEe Q lcl|Aclame:pro 703 PNELRRLTTIVSLS 716 (717) Q Consensus 703 ~~p~e~I~v~i~~t 716 (717) +..||+|++++.++ T Consensus 423 vdamekiy~ti~v~ 436 (436) T protein:vir:78 423 ISAMSKLYMTVSVS 436 (436) T ss_pred EEeeeeEEEEEEEC Confidence 99999999999999 No 45 >protein:vir:103168 Length: 641 # NCBI annotation: gp122 # Family: family:all:661 # MgeID: mge:1583 # MgeName: Syn9 # Cross-refs: genbank:acc:YP_717789;genbank:gi:113200626;genbank:GeneID:4239177 Probab=100.00 E-value=2.3e-44 Score=259.86 Aligned_cols=547 Identities=14% Similarity=0.088 Sum_probs=217.9 Q ss_pred CCcchhcccCCceeEEEecCccccCcCCCCCcceeEEEEEeeccCCcccceecC-HHHHHHhhCCcccccCCcchHHHHH Q lcl|Aclame:pro 1 MAGFDQYQAIPGHNARFKDGNLNLKSDPNPRETESVVLLGTATDGPVMQPVRVT-PETAYNIFGKVAHENGVYNGATLLP 79 (717) Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~gp~~~~~~~~-~~~~~~~fg~~~~~~~~~~~~~~~~ 79 (717) |++ | .-||||||+.|.. ..+++++|++.++||.++|||+++|++|+ ..++++.||++.+.+ ++...++ T Consensus 3 m~~---~-~sPGVyv~E~~~~----~~i~~v~tsvaafvG~~~~GP~~~p~~v~s~~d~~~~FG~~~~~~---~l~~av~ 71 (641) T protein:vir:10 3 VSN---Q-LSPGVVIQERDLT----AVTTPIGLNVGVLAAPFTKGPVEEIFEVSTERDLASVFGEPNDYN---YEYWFTA 71 (641) T ss_pred Ccc---c-cCCceEEEEecCC----CcccccCCccceEEecccCCCCCccEEecCHHHHHHHcCCcCCCc---chHHHHH Confidence 774 4 3499999999853 37999999999999999999999999995 666699999985443 4444455 Q ss_pred HHHHHHHccCCcEEEEEEecCcceeeeeecc----cccc------cccccCCcccceeecCcccceee--ccCCcceeee Q lcl|Aclame:pro 80 KFEELWAAGNRDIRLMRTTGVNAVSSLLGTS----YSKN------SKEVAEDKLGGAQARGNVAATFT--LPNGGIVEAT 147 (717) Q Consensus 80 ~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~----~~~~------~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 147 (717) . ||+|||.+||++|+.|.++.-...... .+.. .....+...-.|.-||.|.-.+. +.+++..... T Consensus 72 ~---fF~ngG~~~~vvRv~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~pG~~gn~l~v~i~~~~~~~~~ 148 (641) T protein:vir:10 72 S---QFLSYGGVLKAIRLNAASLKNSVDSGTAPLIKNLQEYETTYESSNSNTFKFASRDAGALGNSVGIFITDAGPDQIA 148 (641) T ss_pred H---HHHhcCCEEEEEEecCccccccccccchhhccccccccccccCcCccccEEEeccCCCcCCceEEEEEcCCCccee Confidence 5 599999999999999765332111000 0000 00011111112444666653222 2233222111 Q ss_pred EEE-eecce---eecCceeEeccccceeeccccccchhheeecCCcccccccceeehhhhhhhhheeeeeeeEeeccccc Q lcl|Aclame:pro 148 FLL-KARGV---IIPPNNYTLDVGTEEDMKAGTQPTFAQVLLNENVADMESEITVSYEFTYKDAQGETKTSEVLDNNTDK 223 (717) Q Consensus 148 ~~~-~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~gelld~~ie~ 223 (717) ... -+.+. ......++..++.- +....+.......... . ...-.-+..+...+..... ... T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~v~~~~~~~~~~~~~--------~-~~~~~~~~~i~~a~~~~~~-~~~ 213 (641) T protein:vir:10 149 VLPAPGTGNEWEFVADEAVTAASGAS-----AKVYRYSIRLTLTNVV--------G-TFVPGGATTISISGSDESV-DVL 213 (641) T ss_pred eeecccccccceeccceeeeeccCcc-----ccccccccccccccee--------e-ecccCCcceeEeccccccc-ccc Confidence 000 00000 00001111111000 0000000000000000 0 0000001111111110000 011 Q ss_pred ccccCcc-----cCC----ceEEEEEeecccc--ceeeecCccccccchheeccceeEEEEecCccccceEEE--Eeecc Q lcl|Aclame:pro 224 DGKPMIA-----KGA----DVTIKLEHVALAG--LKLYADGIEVVDAKAFTVAGDQLTIHSNSKMKLGASLEA--QYAYN 290 (717) Q Consensus 224 ~~~p~~~-----~~a----g~i~a~r~~~a~~--a~~~~~g~~~~~s~~~g~~an~i~v~l~d~~~t~~~l~v--~~a~~ 290 (717) +|..... ..+ +.+........-. .++...|.+. ...-+.+...+.++.......+....+ .-..+ T Consensus 214 ~~~a~~~~~~i~~~~~g~~g~~~~~~~~t~gt~~~t~a~~g~~~--~~~~~~~~~~ia~aat~ag~~g~~~~v~~~~v~d 291 (641) T protein:vir:10 214 AWDAGNKYLEIALPAGGVTGIFADAQVVTQGTNTAAIASSGIER--RLYIGKDSGSINFAATDAVVDTNATSATISSVRN 291 (641) T ss_pred cccCCcceeeeeecCCcceeeeeeeeeccCCccceeeecccchh--hhhhccccccceeeeecccccccceeeEeeeeee Confidence 1111100 000 1111000110000 0111112110 001111222222222221111111111 00000 Q ss_pred ccccc-c-cceEEEee------------ccccccceEEEEEecCCceEEEEEeeeccCccceeeeeeeecc-cc----ch Q lcl|Aclame:pro 291 LVEVI-Q-PVIELESI------------FGGGVYNDIMRKVESKDGAVTVTITKPESKRGMISEDPLVFKS-GD----YT 351 (717) Q Consensus 291 ~~~~~-~-d~i~l~a~------------~~G~~GN~i~I~v~~~~~~~t~~lt~~~~~~~~~~~~~~~l~~-g~----~~ 351 (717) .+... + ...+...+ +++...+...+.+..+. ..+ ...+.+.|...-+.. .+ +. T Consensus 292 ~~~a~~~~~g~~~~~va~~~gts~~a~~~g~~~D~~~~lv~d~~~-~~~-------g~~g~v~e~~~~~s~~~~~~~~~~ 363 (641) T protein:vir:10 292 EYAEREYLPGSKWVNVAARPGTSLYANSVGGVNDELHVLVIDVDG-KIT-------GNPGSVLERFIGVSKASDAKTSIG 363 (641) T ss_pred eecccccccccccccccccchhhhhhhhcCCcccceEEEEEeecc-eee-------ccccceeeeeecccccCCcccccc Confidence 00000 0 00011111 11222222122121110 000 000011111000000 00 00 Q ss_pred hHHHHHHHhhcCccceeEE-eee-----------------------------------ccccccccccccchhhhhhccC Q lcl|Aclame:pro 352 NFKMLVDAINNHPFNNVVR-ART-----------------------------------KPEFEATFTSTLQAAADAKFSG 395 (717) Q Consensus 352 ~~~~lv~~IN~~~~~~~~~-a~~-----------------------------------~~~~~~~l~s~~~~~~~~~ltg 395 (717) +....++.+|+.+...... ... .+.....+...........|.| T Consensus 364 ~~~~~~~~~~~~s~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g 443 (641) T protein:vir:10 364 EVNYYKEVIKQQSAYVYWGSHETAPFLGTAANAAAGDWGASALNRRYNLLRSTAGTTSFPAGAVTVGSKNNATHYYRLAN 443 (641) T ss_pred cceeeeeeeccccceEEEecccccccccccccccccccccccccccccccccccccccccccccccCCCCcceeEEEeec Confidence 0001111222211111000 000 0000000000111111234566 Q ss_pred CccCcccchhhhhhhcccccccccchhhhhhhhccccccceeEEeccccCCcccccccchhHHHHHHHHHHHhhccccee Q lcl|Aclame:pro 396 GKDELSLDKEEMYKRLGGEKNEEGFVTKQGAYQYLENYEVDYVIPLGVHADTKLIGKYDDFAYQLALACAVMSHYNSVTI 475 (717) Q Consensus 396 G~dG~~~~a~e~~~al~~~~~~~~~v~~~~~~~~le~~~vd~vi~~~~~a~t~~~~~~~~~~~~~a~~~~~~s~~~~~~i 475 (717) |.|+............ + ....-.++...+...+++++......+.. ....+...+..||..+ +.++ T Consensus 444 G~d~~~~~~~~~~~~~-~------~~tg~~~~~~~e~~~i~~l~~~~~~~~~~---~~~~v~~~~i~~ce~~----~d~~ 509 (641) T protein:vir:10 444 GADYSASGALYNLSNV-D------IATAYELIEDPESQVIDYVLSGPAGADEA---AAIAKATTITTIVESR----KDCM 509 (641) T ss_pred Ccccccccccccccch-h------HHHHHHHhhhhhhhccceeeecCCCCCcc---hhHHHHHHHHHHHHhc----CCEE Confidence 6665433322111000 0 00011112223333455555443322211 1112344555666644 2344 Q ss_pred EEecCCCcchhhHHHHHHHHHHHHhhhhhhhhcccccccccchhhhhccccceeEEEeCcEEEEecccCcceeechhHHH Q lcl|Aclame:pro 476 GIIPTTTPSDISLAGVEEHVKKLENYANEFYMRDRFGNIIFDADRNKIDLGQFIEVVAGPDFIVRNTRLGQMASTPDASY 555 (717) Q Consensus 476 ~ii~~~~~~~~~~a~v~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~v~~p~~~v~~~~~~~~~~~p~ag~v 555 (717) .++.................+.+.. .++....+.|..+|+||++++++..+..+++||||++ T Consensus 510 ailD~p~~~~~~~~~~~~~~~~~~~------------------~~~~~~~s~yaa~y~P~~~v~dp~~~~~~~vPpsG~i 571 (641) T protein:vir:10 510 AFLSPLRSDVIGVSNTTTVTENLVN------------------YFNQLPSSNYVVFDSGYKYIYDKYNDVYRYVPCNGDI 571 (641) T ss_pred EEEcCCcccccCCCchhhHHHHHHH------------------HHhhcCCCceEEEEeceeEeecccCCceeEecCCHHH Confidence 4443211100000000000000000 0112234689999999999999999999999999999 Q ss_pred HHHHhc----CCcccccCCc---eecccccccccCCHHHHHHHHhCCcEEEEEEcCceEEEEeceecCCCCccceee Q lcl|Aclame:pro 556 IGMVSQ----LKTQSAPTNK---PLPSVTALRYTYSANQLNRLTKARFATFKYKQDGSIGVVDAPTSAHAGSDYTRL 625 (717) Q Consensus 556 AGl~A~----~gv~~SpaNk---~L~gv~~l~~~lt~~e~d~L~~~GI~~ir~~~g~G~~v~g~rTt~s~ds~~~~I 625 (717) ||++|| +||||||+|. .|.|+++|++++++.|++.||++||||||.|+|+|++- +.-...+ ++ T Consensus 572 AGv~ArtD~~rGvwkAPAn~~~~~i~gv~~l~~~~~~~e~~~Lnp~gIN~ir~fpg~G~v~--~~~~~~~-----~~ 641 (641) T protein:vir:10 572 AGLILETGLEEEPWFSPAGFQRGVLRNAVKLAYSPNKTQRDRLYANRINPVVSFPGHAMIN--NNIAFHT-----KL 641 (641) T ss_pred HHHHHhhhccCCceECcCCcccceeeeeeeeeEecChhHHhhhhhcccceEEecCCceeec--ceeeeee-----cC Confidence 999998 5899999997 58999999999999999999999999999999998652 2221111 11 No 46 >protein:vir:107310 Length: 581 # NCBI annotation: gp123 # Family: family:all:1196 # MgeID: mge:1550 # MgeName: Catera # Cross-refs: genbank:acc:YP_656131;genbank:gi:109393333;genbank:GeneID:4156791 Probab=100.00 E-value=1.2e-43 Score=255.97 Aligned_cols=514 Identities=13% Similarity=0.065 Sum_probs=260.8 Q ss_pred ceeeccccccchh-heeecCCcccccccceeehhhhhhhhheeeeeeeEeecccccccccCcc-cCCceEEEEEeecccc Q lcl|Aclame:pro 169 EEDMKAGTQPTFA-QVLLNENVADMESEITVSYEFTYKDAQGETKTSEVLDNNTDKDGKPMIA-KGADVTIKLEHVALAG 246 (717) Q Consensus 169 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~gelld~~ie~~~~p~~~-~~ag~i~a~r~~~a~~ 246 (717) |..-.++..++.+ .... +..-.|..-.+.+. -+-..-+-+=+-.| ..+...|+.. ..-..++.+.-. +.+ T Consensus 1 ~~~~~~~~~~~~~~~~~~--~~~~~g~~~~~~~~---~~i~g~~~g~~g~~--~s~~~~p~~~~~~e~q~v~~~~~-~t~ 72 (581) T protein:vir:10 1 MAIDFSQYQTPGVYTEAV--GAPQLGIRSSVPTA---VAIFGTAVGYQTYR--ESIRINPDTGETITTQILALVGE-PTG 72 (581) T ss_pred Ceeeeccccccchhhhhc--cccccceeeeeccc---cccccccccccccc--cccccCCCCCCccceEEEEEEec-CCC Confidence 3333333333311 1100 11111111111110 00000000000001 1223444321 222233333222 232 Q ss_pred --ceeeecCccccccchheeccceeEEEEecCcccc-ceEEEEeecccccccccceEEEeeccccccceEEEEEecCCce Q lcl|Aclame:pro 247 --LKLYADGIEVVDAKAFTVAGDQLTIHSNSKMKLG-ASLEAQYAYNLVEVIQPVIELESIFGGGVYNDIMRKVESKDGA 323 (717) Q Consensus 247 --a~~~~~g~~~~~s~~~g~~an~i~v~l~d~~~t~-~~l~v~~a~~~~~~~~d~i~l~a~~~G~~GN~i~I~v~~~~~~ 323 (717) =+|...|. +..+-.|.+.|+.+|.+|++....+ .++++++. -||.+.|+++..-+. T Consensus 73 GtFtLsf~G~-tT~~I~~~asa~~v~~AL~~L~~i~~~~v~v~g~--------------------~g~~~~VtF~g~~~~ 131 (581) T protein:vir:10 73 GSFKLSLAGE-PTGNIPFNATQGQVQSALRALPNVEDDEVTVLGD--------------------PGGPWTVTFTKAVAA 131 (581) T ss_pred ceEEEEeCce-ecccccccCCHHHHHHHHhccCCCCcceEEEECC--------------------CCceEEEEEcCCccc Confidence 25777886 3457789999999999887654332 34554432 222333333222221 Q ss_pred EE-----------EEEeeeccCccceeeeeeeeccccchhHHHHHHHhhcCc----cceeEEeeecc-ccccccccccch Q lcl|Aclame:pro 324 VT-----------VTITKPESKRGMISEDPLVFKSGDYTNFKMLVDAINNHP----FNNVVRARTKP-EFEATFTSTLQA 387 (717) Q Consensus 324 ~t-----------~~lt~~~~~~~~~~~~~~~l~~g~~~~~~~lv~~IN~~~----~~~~~~a~~~~-~~~~~l~s~~~~ 387 (717) .+ .+++..+...+...........|.......+..-..... ....+...+.+ +++.... .+. T Consensus 132 l~~~~~~lt~g~~~~vtV~~~~~g~~~~~~~~s~~gi~~~~~~l~~~~~~~~~~~gsd~~~~~~~~~~~~~~~~~--~D~ 209 (581) T protein:vir:10 132 LTKDVTGLTGGDDPDLNIASEQTGVPAMNRALAKKGIKTDTIRVVNPNSGQVYVLGTDYVVTRVNAGEDGEANTR--DDL 209 (581) T ss_pred eeeeeceecCCCceeEEEeccccCcccccccccccccccccccccccccCcceeccccceeeecccCcccccccc--ccc Confidence 11 111111111111000000001111111112222111110 01111111110 0000000 000 Q ss_pred hhhhhccCCccCc--ccchhh--hhh-------hcccccccccchhhhhhhhcccc--ccceeE--EeccccCCcccccc Q lcl|Aclame:pro 388 AADAKFSGGKDEL--SLDKEE--MYK-------RLGGEKNEEGFVTKQGAYQYLEN--YEVDYV--IPLGVHADTKLIGK 452 (717) Q Consensus 388 ~~~~~ltgG~dG~--~~~a~e--~~~-------al~~~~~~~~~v~~~~~~~~le~--~~vd~v--i~~~~~a~t~~~~~ 452 (717) .+.....+|.-.- +...-. +.+ .+.+.......+.. ++..-.+ .++... +.....+...+.+. T Consensus 210 ~t~~~~~~g~~~~~~~v~~~~~~~~d~~~~~~v~~~~~~~~~~~~~~--~~~~~g~~~~~~t~~~~~~~tn~~~~~l~~g 287 (581) T protein:vir:10 210 YTIQRVVDGGHIDPGDIVQLSYRYTDPNYHEVIRFTDPDDIQDFYGP--AFDEAGNVQSEITLCAQLAITNGASTILACA 287 (581) T ss_pred eeeeeeecccccccceEEEEEEEeecCCcceeEEeecCcchhhhhhh--hhhccCccccchhhhheeeeecccceeEEee Confidence 1111111221000 000000 000 00000000000000 0000000 000000 00000000111111 Q ss_pred cchh--HHHHHHHHHHHhhcccc-eeE-EecCCCcchhhHHHHHHHHHHHHhhhhh-hhhcccccccccch--h---hhh Q lcl|Aclame:pro 453 YDDF--AYQLALACAVMSHYNSV-TIG-IIPTTTPSDISLAGVEEHVKKLENYANE-FYMRDRFGNIIFDA--D---RNK 522 (717) Q Consensus 453 ~~~~--~~~~a~~~~~~s~~~~~-~i~-ii~~~~~~~~~~a~v~~~~~~~~~~~~~-~~~~d~~~~~~~~~--~---~~~ 522 (717) .+.. .....+|...+..+... .+. ++|. +.....++.++.|+++++....+ ++++.......... . ... T Consensus 288 vd~~g~tvt~~dy~~Al~ale~~~~~~ivv~~-t~~~~v~a~l~ahv~~~s~~~~~~ravigV~g~~~~~~~~~~~~~a~ 366 (581) T protein:vir:10 288 VDPEGDTVTMGDYQNALNKFRDEDEIAIIVAG-TGAQPIQALVQQHVSAQSNNKYERRAILGMDGSVTPVPSATRIANAQ 366 (581) T ss_pred ccCCCCccchHHHHHHHHHHhcCCceEEEEeC-CCCHHHHHHHHHHHHHHHhccCCcEEEEEecCCCCCccHHHHHHhhc Confidence 1110 11234555544444333 333 3444 44455678889999988765443 23322221111111 1 111 Q ss_pred ccccceeEEEeCcEEEEecccCcc-eeech---hHHHHHHHhcCCcccccCCceecccccccccCCHHHHHHHHhCCcEE Q lcl|Aclame:pro 523 IDLGQFIEVVAGPDFIVRNTRLGQ-MASTP---DASYIGMVSQLKTQSAPTNKPLPSVTALRYTYSANQLNRLTKARFAT 598 (717) Q Consensus 523 ~~~~~~~~v~~p~~~v~~~~~~~~-~~~p~---ag~vAGl~A~~gv~~SpaNk~L~gv~~l~~~lt~~e~d~L~~~GI~~ 598 (717) ...+.++.+++|+..+.+....+. ..+|+ ++++||++++.++++||+|++++|+.++...|++.|+++|+++|+++ T Consensus 367 ~~n~~Rvvlv~p~~~~~~g~~~~~~v~lp~y~~AA~vAGl~a~~~~~~slT~~~i~gi~~l~~~~s~~e~e~ll~~Gv~~ 446 (581) T protein:vir:10 367 SIKDQRVALISPSSFVYYAPELNREVVLGGQFMAAAVAGKSVSAIAAMPLTRKVIRGFSGPAEVQRDGEKSRESSEGLMV 446 (581) T ss_pred cCCCceEEEEecCceeecCcccCceeccchhhHHHHHHHHhhccccccCcccccccccccccccCCHHHHHHHHhCCeEE Confidence 122466777888888877765443 33555 68999999999999999999999999999999999999999999999 Q ss_pred EEEEcCceEEEEeceecCCCCccceeeehhhhHHHHHHHHHHHHH--HhccccCCHHHHHHHHHHHHHHHHHHHhCCcee Q lcl|Aclame:pro 599 FKYKQDGSIGVVDAPTSAHAGSDYTRLSTARIVKEAVNAVREVAD--PFIGEPNDTGNRNALTAAVDKRLSKMIENKALL 676 (717) Q Consensus 599 ir~~~g~G~~v~g~rTt~s~ds~~~~I~vrR~~d~I~~~I~~~~~--~~IgepN~~~~~~~i~~~I~~fL~~L~~~GaI~ 676 (717) |+..++++++++.++|+...++.|++|++||++|++.+.+|+.++ +||||||++.+|.+|++.+++||++||++|+|. T Consensus 447 l~~~~~~~v~Iv~gItT~~s~~~~~~i~~iR~~D~v~~~ir~~~~~~~fIG~~n~~~~r~~ik~~i~~~L~~l~~~g~I~ 526 (581) T protein:vir:10 447 IEKTPRNLVHVRHGVTTDPTSLHTREWNIIGQQDVMVYRIRDYLDADGLIGMPIYDTTIVQVKASAEAALVWLVDNNIIR 526 (581) T ss_pred EEEecCCeEEEEeeeecCCCCCcceeeeeehhhhHHHHHHHHHhhhhcCCCcccCHHHHHHHHHHHHHHHHHHHhcCccc Confidence 999999999999999888889999999999999999999999974 699999999999999999999999999999999 Q ss_pred cceeeeecChhhhhCCEEEEEEEEEccccccEEEEEEEEeC Q lcl|Aclame:pro 677 GFDFRLVVTPQQELLGEGSIELSLEAPNELRRLTTIVSLSA 717 (717) Q Consensus 677 G~~~~~~~t~~~i~~G~l~v~i~v~P~~p~e~I~v~i~~ta 717 (717) ||+. ...++.+++.++++|+|.++|++|||||++|+++.= T Consensus 527 ~~~~-~~~~~~~~~~d~v~V~i~v~Pv~~i~~I~vti~~~p 566 (581) T protein:vir:10 527 GYRN-LKARQIERQPDVIEVRYEWRPAYPLNYIVVRYSIAP 566 (581) T ss_pred CCcc-ceeeeeecCCCEEEEEEEEEecccceEEEEEEEEec Confidence 9984 233455677899999999999999999999999987 No 47 >protein:vir:7653 Length: 581 # NCBI annotation: gp124 # Family: family:all:1196 # MgeID: mge:148 # MgeName: Bxz1 # Cross-refs: genbank:acc:NP_818197;genbank:gi:29566631;genbank:GeneID:1259809 Probab=100.00 E-value=2.1e-42 Score=249.07 Aligned_cols=520 Identities=13% Similarity=0.081 Sum_probs=250.1 Q ss_pred ccceeeccCCcceeeeEEEeecceeecCceeEeccccceeeccccccc-hhheeecCCcccccccceeehhhhhhhhhee Q lcl|Aclame:pro 132 VAATFTLPNGGIVEATFLLKARGVIIPPNNYTLDVGTEEDMKAGTQPT-FAQVLLNENVADMESEITVSYEFTYKDAQGE 210 (717) Q Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~ 210 (717) .+.-|+. .-.+.+||...+....-.-...|+ .....|..+ +.|- T Consensus 1 ~~~~~~~-----------------~~~~~~~t~~~~~~~~g~~~~~~~~~~i~g~~~g--~~g~---------------- 45 (581) T protein:vir:76 1 MAIDFSQ-----------------YQTPGVYTEAVGAPQLGIRSSVPTAVAIFGTAVG--YQTY---------------- 45 (581) T ss_pred Ccccccc-----------------cccchhhhhhccccccCcceeeeeeeeecccccc--cccc---------------- Confidence 1111111 111122233211000000000111 111111111 0000 Q ss_pred eeeeeEeecccccccccCc-ccCCceEEEEEeeccccc--eeeecCccccccchheeccceeEEEEecCcccc-ceEEEE Q lcl|Aclame:pro 211 TKTSEVLDNNTDKDGKPMI-AKGADVTIKLEHVALAGL--KLYADGIEVVDAKAFTVAGDQLTIHSNSKMKLG-ASLEAQ 286 (717) Q Consensus 211 ~~~gelld~~ie~~~~p~~-~~~ag~i~a~r~~~a~~a--~~~~~g~~~~~s~~~g~~an~i~v~l~d~~~t~-~~l~v~ 286 (717) | ....-.|+. ....-..+.+.- .+.+. +|..+|.. ..+-.|.+.++.+|.+|++....+ ..++++ T Consensus 46 -------~--~s~r~~p~~~~~~evq~v~~~~-~~t~G~ftLt~~g~t-T~~I~~~asa~~v~~AL~~L~~i~~~~v~vt 114 (581) T protein:vir:76 46 -------R--ESIRINPDTGETITTQILALVG-EPTGGSFKLSLAGEP-TGNIPFNATQGQVQSALRALPNVEDDEVTVL 114 (581) T ss_pred -------c--ceeeecCCCCCCCceEEEEEee-cCCcceEEEEeCcee-ccccccCCCHHHHHHHHhhccCCCCceEEEE Confidence 0 011111211 111112222221 22222 45667763 346778899999998887654333 234443 Q ss_pred eecccccccccceEEEeeccccccceEEEEE---ecCCceEEEEEeeeccCccceeeeeeeec-cccchhHHHHHHHhhc Q lcl|Aclame:pro 287 YAYNLVEVIQPVIELESIFGGGVYNDIMRKV---ESKDGAVTVTITKPESKRGMISEDPLVFK-SGDYTNFKMLVDAINN 362 (717) Q Consensus 287 ~a~~~~~~~~d~i~l~a~~~G~~GN~i~I~v---~~~~~~~t~~lt~~~~~~~~~~~~~~~l~-~g~~~~~~~lv~~IN~ 362 (717) .... ....+ .|.|..|. +.+.+ +... ..+++++......... . +.+. .|.+.+....+...+ T Consensus 115 g~~~------~~~~V--~F~g~~~~-~~~~~~~ltg~~-~~~~~V~~~~~G~~~~--~-~~l~~~g~~~~~~~~~~s~~- 180 (581) T protein:vir:76 115 GDPG------GPWTV--TFTKAVAA-LTKDVTGLTGGD-NPDLNIASEQTGVPAM--N-RALAKKGIKTDTIRVVNPNS- 180 (581) T ss_pred cCCC------ceEEE--EEcCCccc-eeEeeeeeecCC-cceeEEEEEecCcCCc--C-ceeeeccccccccceeecCC- Confidence 2111 00111 11122221 11111 1100 0111111100000000 0 0010 111111111111000 Q ss_pred CccceeEEeeecccccccccccc------chhhhhhccCCccCc--ccchhhh-h------h--hcccccccccchhhhh Q lcl|Aclame:pro 363 HPFNNVVRARTKPEFEATFTSTL------QAAADAKFSGGKDEL--SLDKEEM-Y------K--RLGGEKNEEGFVTKQG 425 (717) Q Consensus 363 ~~~~~~~~a~~~~~~~~~l~s~~------~~~~~~~ltgG~dG~--~~~a~e~-~------~--al~~~~~~~~~v~~~~ 425 (717) ...... .........+..+.. +..+.....+|.... ......+ + + .+.+.......... T Consensus 181 ~~~~~l--~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~g~~~~~~~i~~~~~~~~D~~~~~~v~~~~~~~~~~~~~~-- 256 (581) T protein:vir:76 181 GQVYVL--GTDYVVTRVNAGEDGEANTRDDLYTIQRVVDGGHIDPGDIVQLSYRYTDPNYHEVIRFTDPDDIQDFYGP-- 256 (581) T ss_pred cceeee--cccccceeeccCcccceeeeeeeeeeEeecccccccceeEEEEEEEeecCCccceEEEecccccccceee-- Confidence 000000 000000000000000 000111111111000 0000000 0 0 00000000000000 Q ss_pred hhhc--cccccceeE--EeccccCCcccccccchh--HHHHHHHHHHHhhcccc-eeE-EecCCCcchhhHHHHHHHHHH Q lcl|Aclame:pro 426 AYQY--LENYEVDYV--IPLGVHADTKLIGKYDDF--AYQLALACAVMSHYNSV-TIG-IIPTTTPSDISLAGVEEHVKK 497 (717) Q Consensus 426 ~~~~--le~~~vd~v--i~~~~~a~t~~~~~~~~~--~~~~a~~~~~~s~~~~~-~i~-ii~~~~~~~~~~a~v~~~~~~ 497 (717) ++.. ...-++... ......+.+.+.+..+.. ..+.++|...+..+... ... ++|. +..+..++.++.|+++ T Consensus 257 ~~~~~g~~~~e~~~~~~~~~t~~~~~~l~~gvd~~g~tvt~~dy~~aL~ale~~~~~~ivvp~-t~~~~i~a~l~ahv~~ 335 (581) T protein:vir:76 257 AFDEAGNVQSEITLCAQLAITNGASTILACAVDPEGDTVTMGDYQNALNKFRDEDEIAIIVAG-TGAQPIQALVQQHVSA 335 (581) T ss_pred ehhhcCccccchhhhhheeeccccceEEEeeecCCCCccchHHHHHHHHHHhcCCeEEEEEec-CCChHHHHHHHHHHHH Confidence 0000 000000000 000000111111111110 12334565554444333 233 3444 4445566888899998 Q ss_pred HHhhhhh-hhhcccccccccchh-----hhhccccceeEEEeCcEEEEecccCcce-eech---hHHHHHHHhcCCcccc Q lcl|Aclame:pro 498 LENYANE-FYMRDRFGNIIFDAD-----RNKIDLGQFIEVVAGPDFIVRNTRLGQM-ASTP---DASYIGMVSQLKTQSA 567 (717) Q Consensus 498 ~~~~~~~-~~~~d~~~~~~~~~~-----~~~~~~~~~~~v~~p~~~v~~~~~~~~~-~~p~---ag~vAGl~A~~gv~~S 567 (717) ++..+.+ ++++........... ......+.++.+++|+..+++....+.. ..|+ ++++||++++.++++| T Consensus 336 ~s~~~~~~ra~igv~g~~~~~~~~~~~~~a~~~ns~Rvvlv~p~~~~~~g~~~~~~~~lp~~~~AA~vAG~~a~~~~~~s 415 (581) T protein:vir:76 336 QSNNKYERRAILGMDGSVTPVPSATRIANAQSIKDQRVALISPSSFVYYAPELNREVVLGGQFMAAAVAGKSVSAIAAMP 415 (581) T ss_pred HHhccCCceEEEEeeCCCCCchHHHHHHhhcccCCCcEEEEEcCceEeccccCCcceecchhhhhhhHHhhhhccccccC Confidence 8765443 222222221111111 1111235667788888888777655433 3444 6788999999999999 Q ss_pred cCCceecccccccccCCHHHHHHHHhCCcEEEEEEcCceEEEEeceecCCCCccceeeehhhhHHHHHHHHHHHHH--Hh Q lcl|Aclame:pro 568 PTNKPLPSVTALRYTYSANQLNRLTKARFATFKYKQDGSIGVVDAPTSAHAGSDYTRLSTARIVKEAVNAVREVAD--PF 645 (717) Q Consensus 568 paNk~L~gv~~l~~~lt~~e~d~L~~~GI~~ir~~~g~G~~v~g~rTt~s~ds~~~~I~vrR~~d~I~~~I~~~~~--~~ 645 (717) |+|++|+|+.++...|++.|+++|+++|+++|+..++++++++.++|+...+++|++|++||++|++.+.+++.++ +| T Consensus 416 lT~~~i~g~~~~~~~~s~~e~e~ll~~Gv~~l~~~~~~~v~Iv~gItT~~s~~~~k~i~viR~~D~v~~~vr~~~~~~~f 495 (581) T protein:vir:76 416 LTRKVIRGFSGPAEVQRDGEKSRESSEGLMVIEKTPRNLVHVRHGVTTDPTSLHTREWNIIGQQDVMVYRIRDYLDADGL 495 (581) T ss_pred cccccccccccccccCCHHHHHHHHhCCeEEEEEecCCeEEEEEeeecCCCCCccceeeehhhhHHHHHHHHHHHhhhcC Confidence 9999999999999999999999999999999999999999999998888889999999999999999999999975 69 Q ss_pred ccccCCHHHHHHHHHHHHHHHHHHHhCCceecceeeeecChhhhhCCEEEEEEEEEccccccEEEEEEEEeC Q lcl|Aclame:pro 646 IGEPNDTGNRNALTAAVDKRLSKMIENKALLGFDFRLVVTPQQELLGEGSIELSLEAPNELRRLTTIVSLSA 717 (717) Q Consensus 646 IgepN~~~~~~~i~~~I~~fL~~L~~~GaI~G~~~~~~~t~~~i~~G~l~v~i~v~P~~p~e~I~v~i~~ta 717 (717) ||+||++.+|.+|++.|..||.+||++|+|.||+.. ...+.+++.++++|++.++|++|||||++|+++.= T Consensus 496 iG~~n~~~~r~~ik~~i~~~L~~l~~~g~I~g~~~~-~~~~~~~~~d~v~V~i~v~Pv~~ie~I~vt~~~~p 566 (581) T protein:vir:76 496 IGMPIYDTTIVQVKASAEAALVWLVDNNIIRGYRNL-KARQIERQPDVIEVRYEWRPAYPLNYIVVRYSIAP 566 (581) T ss_pred CCcccChHHHHHHHHHHHHHHHHHHhcCcccCcccc-eeeEEecCCCEEEEEEEEEecccceEEEEEEEEee Confidence 999999999999999999999999999999999842 33445567789999999999999999999999977 No 48 >protein:vir:102359 Length: 356 # NCBI annotation: XkdK protein # Family: family:all:632 # MgeID: mge:1566 # MgeName: phi CD119 # Cross-refs: genbank:acc:YP_529565;genbank:gi:90592650;genbank:GeneID:3974491 Probab=99.94 E-value=1.9e-27 Score=167.03 Aligned_cols=325 Identities=11% Similarity=0.085 Sum_probs=196.4 Q ss_pred ccccceEEEEeecccccccccceEEEeeccccccceEEEEEecCCceEEEEEeeeccCccceeeeeeeeccccchhHHHH Q lcl|Aclame:pro 277 MKLGASLEAQYAYNLVEVIQPVIELESIFGGGVYNDIMRKVESKDGAVTVTITKPESKRGMISEDPLVFKSGDYTNFKML 356 (717) Q Consensus 277 ~~t~~~l~v~~a~~~~~~~~d~i~l~a~~~G~~GN~i~I~v~~~~~~~t~~lt~~~~~~~~~~~~~~~l~~g~~~~~~~l 356 (717) +.--..+.+.|. .+..+|+++|.+|..+.|-...+.. -..++.. ...+....... T Consensus 1 ~~glp~i~i~f~---------~~a~ta~~~g~rGiv~~il~d~~~~--~~~~~~~--------------~~v~~~~~~~n 55 (356) T protein:vir:10 1 MAGLVNINIEFK---------ELATSFIQRSKAGIVAIILKDTTKM--YKELTSE--------------DDIPISLSADN 55 (356) T ss_pred CCCCCceeEEEe---------ecceeeccCCccceEEEEEecCCcc--eeEEecc--------------ccchhHHHHHH Confidence 222244555553 2477899999999665443322111 0111100 00000000011 Q ss_pred HHHhhcCccceeEEeeeccccccccccccchhhhhhccCCccCcccchhhhhhhcccccccccchhhhhhhhccccccce Q lcl|Aclame:pro 357 VDAINNHPFNNVVRARTKPEFEATFTSTLQAAADAKFSGGKDELSLDKEEMYKRLGGEKNEEGFVTKQGAYQYLENYEVD 436 (717) Q Consensus 357 v~~IN~~~~~~~~~a~~~~~~~~~l~s~~~~~~~~~ltgG~dG~~~~a~e~~~al~~~~~~~~~v~~~~~~~~le~~~vd 436 (717) ...+... +.. + .+ .........++..+. .+..+ ++.++..+|++++| T Consensus 56 ~~~i~~~---------~~g-~--~~----~~~~~~p~~~~~~~~-~t~~~----------------y~~aL~~le~~~fn 102 (356) T protein:vir:10 56 KKYIKYG---------FVG-A--TD----NEKVLRPSKVIISTF-TEDGK----------------VEDILEELESVEFN 102 (356) T ss_pred HHHHHHH---------hhc-c--cc----ccccccceeeeeecc-cCchh----------------HHHHHHHhcCccce Confidence 1111100 000 0 00 000000011111000 00111 23344567888888 Q ss_pred eEEeccccCCcccccccchhHHHHHHHHHHHhhcccceeEEecCCCcchhhHHHHHHHHHHHHhhhhhhhhccccccccc Q lcl|Aclame:pro 437 YVIPLGVHADTKLIGKYDDFAYQLALACAVMSHYNSVTIGIIPTTTPSDISLAGVEEHVKKLENYANEFYMRDRFGNIIF 516 (717) Q Consensus 437 ~vi~~~~~a~t~~~~~~~~~~~~~a~~~~~~s~~~~~~i~ii~~~~~~~~~~a~v~~~~~~~~~~~~~~~~~d~~~~~~~ 516 (717) .+.+... .......++.|++.++......+.++...... T Consensus 103 ~l~~~~~---------d~~~~~~~~a~ikr~r~~~~~~~~~V~~~~~a-------------------------------- 141 (356) T protein:vir:10 103 YLCMPEA---------IEAEKTKIVTWIKKIREEESTEAKAVLANIKA-------------------------------- 141 (356) T ss_pred EEEecCC---------ChHHHHHHHHHHHHHHhcCCcEEEEEecCCCC-------------------------------- Confidence 6654321 12356778889988876554444333211100 Q ss_pred chhhhhccccceeEEEeCcEEEEecccCcceeec--hhHHHHHHHhcCCcccccCCceecccccccccCCHHHHHHHHhC Q lcl|Aclame:pro 517 DADRNKIDLGQFIEVVAGPDFIVRNTRLGQMAST--PDASYIGMVSQLKTQSAPTNKPLPSVTALRYTYSANQLNRLTKA 594 (717) Q Consensus 517 ~~~~~~~~~~~~~~v~~p~~~v~~~~~~~~~~~p--~ag~vAGl~A~~gv~~SpaNk~L~gv~~l~~~lt~~e~d~L~~~ 594 (717) +.++ -+++. .... + .+..+-+ .++++||++|++++.+|++|+.+.++... .+|+++|++.+.++ T Consensus 142 D~Eg-------IInv~-n~~~-~----~g~~~t~~~~~~~vAG~~Ag~~~n~S~T~~~~~~~~~~-~~~t~~e~~~ai~~ 207 (356) T protein:vir:10 142 DNEA-------IINFT-ENVV-V----DGEEITAEKYTTRVASLIASTPNTQSITYAPLDEVESI-VKIDKASADAKVQA 207 (356) T ss_pred CCce-------eEEee-cCeE-e----cceeechhHHHHHHHHHHhccchhccccceecCCcccc-ccCCHHHHHHHHhC Confidence 0000 01111 1111 1 1122222 37899999999999999999999986554 57999999999999 Q ss_pred CcEEEEEEcCceEEEEeceec-----CCCCccceeeehhhhHHHHHHHHHHHHH-Hhccc-cCCHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 595 RFATFKYKQDGSIGVVDAPTS-----AHAGSDYTRLSTARIVKEAVNAVREVAD-PFIGE-PNDTGNRNALTAAVDKRLS 667 (717) Q Consensus 595 GI~~ir~~~g~G~~v~g~rTt-----~s~ds~~~~I~vrR~~d~I~~~I~~~~~-~~Ige-pN~~~~~~~i~~~I~~fL~ 667 (717) |..++.+ .++.++|..+.++ ...+.+|++|+++|++|.|.++|++.++ .|||+ ||+...|..+++.|+.||+ T Consensus 208 G~lvl~~-d~~~V~I~~~VNSltt~t~~k~~~f~Kirvvr~~D~i~~Di~~~f~~~yiGKv~N~~dgr~~l~~ai~~y~~ 286 (356) T protein:vir:10 208 GELILRR-LSGKIRIARGINSLTTLTAEKGEIFQKIKLVDTKDLISKDIKNIYVEKYLRKCPNTYDNKCLFIVAVQSYLT 286 (356) T ss_pred CeEEEEE-EcCeEEEEecCccceecCCCCCcchhhhHHHHHHHHHHHHHHHHHhhccccccCCCHHHHHHHHHHHHHHHH Confidence 9999965 5678999988865 2456779999999999999999999986 69999 6999999999999999999 Q ss_pred HHHhCCcee-cceeeeecChhh---------------------hhCCEEEEEEEEEccccccEEEEEEEE Q lcl|Aclame:pro 668 KMIENKALL-GFDFRLVVTPQQ---------------------ELLGEGSIELSLEAPNELRRLTTIVSL 715 (717) Q Consensus 668 ~L~~~GaI~-G~~~~~~~t~~~---------------------i~~G~l~v~i~v~P~~p~e~I~v~i~~ 715 (717) +|++.|+|. +++++++...|. .....+++.+.++|+..||+|++++.+ T Consensus 287 ~L~~~~~I~~~~~~eid~e~q~~~~~~~g~d~~~~~d~~v~~~~~~~~v~~~~~v~~vdamE~iy~ti~v 356 (356) T protein:vir:10 287 ELAKQELIDSNFTVEIDLEKQKEYLEGKKIAVSKMKENEIKEANTGSNGFYLINLKLVDAMEDINIRVQM 356 (356) T ss_pred HHHhCCccccCceeEecccchHHHhhhccccccccccceeecccCCcEEEEEEEEEEEeeeeeEEeEEeC Confidence 999999996 556554432221 123568999999999999999999999 No 49 >protein:vir:101326 Length: 529 # NCBI annotation: gp22 # Family: family:all:9453 # MgeID: mge:1512 # MgeName: P1 # Cross-refs: genbank:acc:YP_006525;genbank:gi:46401679;genbank:GeneID:2777386 Probab=99.89 E-value=2.7e-22 Score=138.80 Aligned_cols=492 Identities=13% Similarity=0.087 Sum_probs=257.6 Q ss_pred CCcchhcc---cCCceeEEEecCccccCcCCCCCcceeEEEEEeeccCCcccceecCHHHHHHhhCCcccccCCcchHHH Q lcl|Aclame:pro 1 MAGFDQYQ---AIPGHNARFKDGNLNLKSDPNPRETESVVLLGTATDGPVMQPVRVTPETAYNIFGKVAHENGVYNGATL 77 (717) Q Consensus 1 ~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~gp~~~~~~~~~~~~~~~fg~~~~~~~~~~~~~~ 77 (717) |+.+.--| +--||-+.-.+-+.-++.-. .--+++...||.+.||+|+.|+.||....+.+.|++.+-+.-..+-.+ T Consensus 1 ~~~ysi~q~ig~aSGvav~pi~~d~t~~~~~-g~g~~v~a~Vgif~RG~i~k~~~Vt~~n~~~~LGep~~~~~ga~~E~~ 79 (529) T protein:vir:10 1 MSQYSIQQSLGNASGVAVSPINADATLSTGV-ALNSSLWAGIGVFARGKPFTVLAVTESNYEDVLGEPLKPSSGSQFEPI 79 (529) T ss_pred CCceehhhhhhhhcccccCCcCcccccchhe-ecCceEEEEEEEeecCCCcceEEEchhHHHHHhccccCCCcchhhhhH Confidence 65443222 33566665444333222221 224689999999999999999999999999999998766655666667 Q ss_pred HHHHHHHHHccCCcEEEEEEecCcceeeeeecccccccccccCCcccceeecCcccceeeccCCcceeeeEEEeecceee Q lcl|Aclame:pro 78 LPKFEELWAAGNRDIRLMRTTGVNAVSSLLGTSYSKNSKEVAEDKLGGAQARGNVAATFTLPNGGIVEATFLLKARGVII 157 (717) Q Consensus 78 ~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (717) ++=| ||+.+| ++|++|++ |++..++.+... . T Consensus 80 ~h~~-eA~~~~--s~yVVRvv-------------------~~dak~p~i~~~-~-------------------------- 110 (529) T protein:vir:10 80 RHVY-EAIQQT--SGYVVRAV-------------------PDDAKFPIIMFD-E-------------------------- 110 (529) T ss_pred hhhh-hhhcCC--ceEEEEEc-------------------ccccCCceEEec-C-------------------------- Confidence 7743 466666 79999987 222222101111 0 Q ss_pred cCceeEeccccceeeccccccchhheeecCCcccccccceeehhhhhhhhheeeeeeeEeecccccccccC--cccCCce Q lcl|Aclame:pro 158 PPNNYTLDVGTEEDMKAGTQPTFAQVLLNENVADMESEITVSYEFTYKDAQGETKTSEVLDNNTDKDGKPM--IAKGADV 235 (717) Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~gelld~~ie~~~~p~--~~~~ag~ 235 (717) +++. + ...|.++ .....|. T Consensus 111 -----~~~~---------------------~---------------------------------~s~~~~s~~~~l~~G~ 131 (529) T protein:vir:10 111 -----SGEP---------------------A---------------------------------YSALPYGSEIELDSGE 131 (529) T ss_pred -----Cccc---------------------h---------------------------------hhcccccccccccccc Confidence 0000 0 0011110 0001111 Q ss_pred EEEEEeeccccceeeecCccccccchheeccceeEEEEecCcc---ccceEEEEeecccccc-cccceEEEeeccccccc Q lcl|Aclame:pro 236 TIKLEHVALAGLKLYADGIEVVDAKAFTVAGDQLTIHSNSKMK---LGASLEAQYAYNLVEV-IQPVIELESIFGGGVYN 311 (717) Q Consensus 236 i~a~r~~~a~~a~~~~~g~~~~~s~~~g~~an~i~v~l~d~~~---t~~~l~v~~a~~~~~~-~~d~i~l~a~~~G~~GN 311 (717) - +.|.++|... ++.+|++++...+... .+..+++ T Consensus 132 ~--------------------------------~~iy~~Dgd~~~s~~~~l~i~~~~ads~g~e~~~l~~---------- 169 (529) T protein:vir:10 132 A--------------------------------FAIYVDDGDPCISPTRELTIETATADSAGNERFLLKL---------- 169 (529) T ss_pred e--------------------------------EEEEEecCcCccCCceEEEEEeeccccCCCccceeeE---------- Confidence 1 1122222211 1223333332111000 0000011 Q ss_pred eEEEEEecC--CceEEEEEeeeccCccceeeeeeeeccccchhHHHHHHHhhcCccceeEEeeeccccccccccccchhh Q lcl|Aclame:pro 312 DIMRKVESK--DGAVTVTITKPESKRGMISEDPLVFKSGDYTNFKMLVDAINNHPFNNVVRARTKPEFEATFTSTLQAAA 389 (717) Q Consensus 312 ~i~I~v~~~--~~~~t~~lt~~~~~~~~~~~~~~~l~~g~~~~~~~lv~~IN~~~~~~~~~a~~~~~~~~~l~s~~~~~~ 389 (717) +++++.. +..+++++...+. .+++ .|. .+-|-+...+.+.. ..+....+... +..+..+. T Consensus 170 --~~~~~~g~~~~let~~~sl~~~---a~dd------~G~---~~yl~svle~~s~~--l~ai~~~e~~~--t~~~~t~~ 231 (529) T protein:vir:10 170 --TQTTSLGVVTTLETHTVSLAEE---AKDD------MGR---LCYLPTALEARSKY--LRAVVNEELIS--TAKVTNKK 231 (529) T ss_pred --EEEeecCCceEEEEEEeeeeec---hhhh------cCC---ccchhHHHhhccCc--eeeeeeecccc--ccchhhhh Confidence 1111101 1112333322221 1111 011 11111221211110 11111111111 12223334 Q ss_pred hhhccCCccCccc--chhhhhhhcccccccccchhhhhhhhcccccccee--EEeccccCCcccccccchhHHHHHHHHH Q lcl|Aclame:pro 390 DAKFSGGKDELSL--DKEEMYKRLGGEKNEEGFVTKQGAYQYLENYEVDY--VIPLGVHADTKLIGKYDDFAYQLALACA 465 (717) Q Consensus 390 ~~~ltgG~dG~~~--~a~e~~~al~~~~~~~~~v~~~~~~~~le~~~vd~--vi~~~~~a~t~~~~~~~~~~~~~a~~~~ 465 (717) +..|+||.||... .+.++..+ ...|++-.+|. ++-.+++.+. ....+...|. T Consensus 232 d~~f~~GtdG~~~~i~s~~y~~A----------------~~~L~n~p~d~~~il~~g~y~~a--------~I~~L~~ic~ 287 (529) T protein:vir:10 232 SLAFTGGTNGDQSKISTAAYLRA----------------VKVLNNAPYMYTAVLGLGCYDNA--------AITALGKICA 287 (529) T ss_pred hhhccCCccccccccchHHHHHH----------------HHHhcCCcceeeeeeccCCccHH--------HHHHHHHHHh Confidence 4588999988542 22333322 23344433443 4444444332 2345555553 Q ss_pred HHhhcccceeEEecCCCcchhhHHHHHHHHHHHHhhhhhhhhcccccccccchhhhhccccceeEEEeCcEEEEecccCc Q lcl|Aclame:pro 466 VMSHYNSVTIGIIPTTTPSDISLAGVEEHVKKLENYANEFYMRDRFGNIIFDADRNKIDLGQFIEVVAGPDFIVRNTRLG 545 (717) Q Consensus 466 ~~s~~~~~~i~ii~~~~~~~~~~a~v~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~v~~p~~~v~~~~~~~ 545 (717) . +.+.+.... ++.. ..+....+.+.. .+... .+-+...+|-.+..-|+-+.+ T Consensus 288 ~-----~~~d~f~DV-~~~L-T~~aA~~~~e~~-gl~~~--------------------~~~~~s~y~~P~~~~D~~tg~ 339 (529) T protein:vir:10 288 D-----RLIDGFFDV-KPTL-TYAEALPAVEDT-GLLGT--------------------DYVSCSVYHYPFSCKDKWTQS 339 (529) T ss_pred h-----hhhcEEEcC-CCCc-CHHHHHHHHHhc-Ccccc--------------------CceeeEEEEcceeeccccccC Confidence 1 112222211 1111 122222332211 00000 001123344444466777777 Q ss_pred ceeechhH--HHHHHHh-----c-CCcccccCCce---eccccccccc--CCHHHHHHHHhCCcEEEEEEcCceEEEEec Q lcl|Aclame:pro 546 QMASTPDA--SYIGMVS-----Q-LKTQSAPTNKP---LPSVTALRYT--YSANQLNRLTKARFATFKYKQDGSIGVVDA 612 (717) Q Consensus 546 ~~~~p~ag--~vAGl~A-----~-~gv~~SpaNk~---L~gv~~l~~~--lt~~e~d~L~~~GI~~ir~~~g~G~~v~g~ 612 (717) ....+++| +.|+-.. . -|.|.+|+++. |+ =.++..- .++.|.+.|..++||++-.-.++++++..+ T Consensus 340 k~~~GlsG~A~~akargv~~na~v~g~hY~pAGe~r~~in-r~~I~~ly~~d~~e~~~lv~~riNPV~~~~~g~~~idDs 418 (529) T protein:vir:10 340 RVVFGLSGVAYAAKARGVKKNSDVGGWHYSPAGEERAVIA-RASIQPLYPEDTPDEEAMVKGRLNKVSVGTSGQMIIDDA 418 (529) T ss_pred ceeeCCCcceeeccccceeecccccccccccCCCccceee-cccceeccCCCccCHHHHHhhccCeeeeeccCcceeeee Confidence 66677766 3343221 1 25699999873 22 1233333 345567789999999987656677888778 Q ss_pred eecCCCCccceeeehhhhHHHHHHHHHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHhCCceecce--------ee-ee Q lcl|Aclame:pro 613 PTSAHAGSDYTRLSTARIVKEAVNAVREVADPFIGEPNDTGNRNALTAAVDKRLSKMIENKALLGFD--------FR-LV 683 (717) Q Consensus 613 rTt~s~ds~~~~I~vrR~~d~I~~~I~~~~~~~IgepN~~~~~~~i~~~I~~fL~~L~~~GaI~G~~--------~~-~~ 683 (717) .|++.+++-||++++++++++|.+..-+..+|..+||+....|. ++..++.+|+.+++.|+|.+-+ +. .+ T Consensus 419 Lt~~~knny~R~~hv~~lmn~I~~~~~k~a~~~~~~Pd~it~~g-l~~~l~~~L~r~~asgalv~prdp~~~G~epy~~~ 497 (529) T protein:vir:10 419 LTCCTQDNYLHFQHVPSLMNAISRFFVQLARQMKHSPDGITAAG-LTKGMTKLLDRFVASGALVAPRDPDADGTEPYVLK 497 (529) T ss_pred eceeeeCCchhhhhHHHHHHHHHHHHHHHHHHHhhCCChHHHHH-HHHhHHHHHHHHHhcCceecccCccCCCCCceEEE Confidence 88888899999999999999999999999999999999999998 9999999999999999997532 11 23 Q ss_pred cChhhhhCCEEEEEEEEEccccccEEEEEEEEeC Q lcl|Aclame:pro 684 VTPQQELLGEGSIELSLEAPNELRRLTTIVSLSA 717 (717) Q Consensus 684 ~t~~~i~~G~l~v~i~v~P~~p~e~I~v~i~~ta 717 (717) .+| .+.+++.|++.+.|....++|.+.-++=- T Consensus 498 V~q--~d~D~~~v~~~~~ptGv~Rri~~~p~l~~ 529 (529) T protein:vir:10 498 VTQ--AEFDKWEVVWACCPTGVARRIQGVPLLIK 529 (529) T ss_pred Eee--cccCeEEEEEEeecCCceeeEEeeeeecC Confidence 333 44589999999999999999998776666 No 50 >protein:vir:4517 Length: 498 # NCBI annotation: tail sheath protein # Family: family:all:369 # MgeID: mge:97 # MgeName: V # Cross-refs: genbank:acc:NP_599043;genbank:gi:19549001;genbank:GeneID:935236 Probab=99.60 E-value=5e-15 Score=98.96 Aligned_cols=447 Identities=13% Similarity=0.131 Sum_probs=225.1 Q ss_pred CC-cchhccc---CCceeEEEecCccccCcCCCCCcceeEEEEEeeccC---CcccceecC-HHHHHHhhCCcccccCCc Q lcl|Aclame:pro 1 MA-GFDQYQA---IPGHNARFKDGNLNLKSDPNPRETESVVLLGTATDG---PVMQPVRVT-PETAYNIFGKVAHENGVY 72 (717) Q Consensus 1 ~~-~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g---p~~~~~~~~-~~~~~~~fg~~~~~~~~~ 72 (717) |. .|++-|+ .||.|+||...... .+...+.++|+|=...+ |.++||+|+ .+++...||+ T Consensus 1 M~IsF~~IP~~iRvP~~y~E~dns~A~-----~~~~~q~vLiiGq~la~gs~~~~~~v~v~s~~~a~~lfG~-------- 67 (498) T protein:vir:45 1 MTISFNTIPSNTLVPLFYAEMDNQAAN-----TAQDSGASLLIGHANNGAEIVANSLVLMPSADYARQICGA-------- 67 (498) T ss_pred CCCchhhcCcccccCeEEEEEeCCCCC-----CCCCCcceEEEEecCCccccccceeEEecCHHHHHHhcCc-------- Confidence 43 5888775 79999999887763 23345679999987655 779999995 6778989995 Q ss_pred chHHHHHHHHHHHHccCC--cEEEEEEecCcceeeeeecccccccccccCCcccceeecCcccceeeccCCcceeeeEEE Q lcl|Aclame:pro 73 NGATLLPKFEELWAAGNR--DIRLMRTTGVNAVSSLLGTSYSKNSKEVAEDKLGGAQARGNVAATFTLPNGGIVEATFLL 150 (717) Q Consensus 73 ~~~~~~~~~~~~~~~~~~--~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (717) |-.++.|..+|++-+. ++|++=+. |. .| ..+.|.+.++=+...+|-+ + + T Consensus 68 --GSml~~M~~a~~~~n~~~~l~~i~~~------------d~----------aG-~aA~g~it~tg~at~~G~l---~-l 118 (498) T protein:vir:45 68 --GSQLARMVEAYRQTDPFGELYVIAVP------------EA----------TG-AAATVTLTVTGEATESGTV---N-V 118 (498) T ss_pred --CcHHHHHHHHHHHhCCcceEEEEeeC------------Cc----------cc-ceeEEEEEeecccCCCcEE---E-E Confidence 4557778888876654 33333322 11 11 2333333322111111111 0 1 Q ss_pred eecceeecCceeEeccccceeeccccccchhheeecCCcccccccceeehhhhhhhhheeeeeeeEeecccccccccCcc Q lcl|Aclame:pro 151 KARGVIIPPNNYTLDVGTEEDMKAGTQPTFAQVLLNENVADMESEITVSYEFTYKDAQGETKTSEVLDNNTDKDGKPMIA 230 (717) Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~gelld~~ie~~~~p~~~ 230 (717) |--|+.+ .+.+.. .-+..++ ... |-+.|. T Consensus 119 ~Igg~~v-----~v~V~~--------gdTaa~v-----------------A~a-------------l~aain-------- 147 (498) T protein:vir:45 119 YVGRTRV-----QAPVTN--------GDNVTTI-----------------ASS-------------IQDAIN-------- 147 (498) T ss_pred EECCEEE-----EEEecC--------CCCHHHH-----------------HHH-------------HHHHHh-------- Confidence 1111100 010000 0000000 000 000011 Q ss_pred cCCceEEEEEeeccccceeeecCccccccchheeccceeEEEEecCccccceEEEEeecccccccccceEEEeecccccc Q lcl|Aclame:pro 231 KGADVTIKLEHVALAGLKLYADGIEVVDAKAFTVAGDQLTIHSNSKMKLGASLEAQYAYNLVEVIQPVIELESIFGGGVY 310 (717) Q Consensus 231 ~~ag~i~a~r~~~a~~a~~~~~g~~~~~s~~~g~~an~i~v~l~d~~~t~~~l~v~~a~~~~~~~~d~i~l~a~~~G~~G 310 (717) + .-.+.|. -.. .-..++|+|++.|+.| T Consensus 148 ----------------a---~~~lPVT-------------A~~---------------------~~~~VtlTAr~kG~~G 174 (498) T protein:vir:45 148 ----------------A---VPTLPFT-------------ASS---------------------SAGVVTLTARHKGLCG 174 (498) T ss_pred ----------------C---CCCCceE-------------EEe---------------------cCceEEEEeeccCccc Confidence 0 0011110 000 0023689999999999 Q ss_pred ceEEEEEecCCceEEEEEeeeccCccceeeeeeeeccccchhHHHHHHHhhcCccceeEEeeeccccccccccccchhhh Q lcl|Aclame:pro 311 NDIMRKVESKDGAVTVTITKPESKRGMISEDPLVFKSGDYTNFKMLVDAINNHPFNNVVRARTKPEFEATFTSTLQAAAD 390 (717) Q Consensus 311 N~i~I~v~~~~~~~t~~lt~~~~~~~~~~~~~~~l~~g~~~~~~~lv~~IN~~~~~~~~~a~~~~~~~~~l~s~~~~~~~ 390 (717) |.|.++++.-.... ++ . .+ .|- -+. - T Consensus 175 N~I~l~~~~~~~~~---------ge-~---~p----~Gl------------------t~~-------------------i 200 (498) T protein:vir:45 175 NEIPVSLNYYGFGG---------GE-V---LP----AGV------------------QIA-------------------V 200 (498) T ss_pred cceeEEEeeccccc---------cc-c---cc----cee------------------eEE-------------------E Confidence 99998874321100 00 0 00 000 000 0 Q ss_pred hhccCCccCcccchhhhhhhcccccccccchhhhhhhhccccccceeEEeccccCCcccccccchhHHHHHHHHHHHhh- Q lcl|Aclame:pro 391 AKFSGGKDELSLDKEEMYKRLGGEKNEEGFVTKQGAYQYLENYEVDYVIPLGVHADTKLIGKYDDFAYQLALACAVMSH- 469 (717) Q Consensus 391 ~~ltgG~dG~~~~a~e~~~al~~~~~~~~~v~~~~~~~~le~~~vd~vi~~~~~a~t~~~~~~~~~~~~~a~~~~~~s~- 469 (717) ..++||. |. .++..++. .+....+|+++.. +.|+.. ...+.+|+...+. T Consensus 201 tamagGa-g~----PD~a~ala----------------al~~~~~~~I~~p--~~D~as-------L~al~~~L~~~sgR 250 (498) T protein:vir:45 201 ATGTAGT-GA----PVLTGAVA----------------AMADEPFDYIGLP--FNDTAS-------VNTLVTEMNDTSGR 250 (498) T ss_pred EccCCCc-cC----chhHHHHH----------------HhccCCccEEEEe--eCCHHH-------HHHHHHHHhhhhhh Confidence 0122331 10 01211221 1223445555443 222211 1233444433221 Q ss_pred ----cccceeEEecCCCcchhhHHHHHHHHHHHHhhhhhhhhcccccccccchhhhhccccceeEEEeCcEEEEecccCc Q lcl|Aclame:pro 470 ----YNSVTIGIIPTTTPSDISLAGVEEHVKKLENYANEFYMRDRFGNIIFDADRNKIDLGQFIEVVAGPDFIVRNTRLG 545 (717) Q Consensus 470 ----~~~~~i~ii~~~~~~~~~~a~v~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~v~~p~~~v~~~~~~~ 545 (717) ..+..+.+.+.. . .++.+..+.... | ++++.+.+ +.+. T Consensus 251 w~~~~q~~g~~~~a~~---g-T~~~l~t~g~~~------------------N--------~~~it~~~-----~~~~--- 292 (498) T protein:vir:45 251 WSYARQLYGHVYTAKT---G-TLSELVNAGDQF------------------N--------QQHITLAG-----YEKE--- 292 (498) T ss_pred hhHHhhcCeEEEEecc---C-CHHHHHHhhhcc------------------C--------CceEEEEe-----cCCC--- Confidence 111222222211 1 122222221100 0 11122111 1111 Q ss_pred ceeech---hHHHHHHHh---cCCcccccCCceecccc--cccccCCHHHHHHHHhCCcEEEEEEcCceEEEEeceecC- Q lcl|Aclame:pro 546 QMASTP---DASYIGMVS---QLKTQSAPTNKPLPSVT--ALRYTYSANQLNRLTKARFATFKYKQDGSIGVVDAPTSA- 616 (717) Q Consensus 546 ~~~~p~---ag~vAGl~A---~~gv~~SpaNk~L~gv~--~l~~~lt~~e~d~L~~~GI~~ir~~~g~G~~v~g~rTt~- 616 (717) ...|+ ++.+||..| +.+|-.+...-.|+|+. .+...|+..|++.|..+||.+++--+| -++|...+|++ T Consensus 293 -~~sp~~~~AAa~aa~~A~~l~~DPArPL~tl~L~Gi~~p~~~~r~~~~ern~LL~~Gist~~V~~G-~V~I~R~ITTY~ 370 (498) T protein:vir:45 293 -TQTPADELAASRTARAAVFIRNDPARPTQTGELVGMLPAPKGKRFTMTEQQTLLSHGVATAYVESG-VLRIQRDVTTYR 370 (498) T ss_pred -CCChHHHHHHHHHHHHHHHhhcccccccCceeecceecCCchhcCChHHHHHHHhCCcceEEEcCC-eEEEEeeeeeee Confidence 11232 344555555 45676666677888887 556679999999999999999975444 58899999984 Q ss_pred -----CCCccceeeehhhhHHHHHHHHHHHHH-HhccccCCHH-----------HHHHHHHHHHHHHHHHHhCCceecce Q lcl|Aclame:pro 617 -----HAGSDYTRLSTARIVKEAVNAVREVAD-PFIGEPNDTG-----------NRNALTAAVDKRLSKMIENKALLGFD 679 (717) Q Consensus 617 -----s~ds~~~~I~vrR~~d~I~~~I~~~~~-~~IgepN~~~-----------~~~~i~~~I~~fL~~L~~~GaI~G~~ 679 (717) ..|+.|..|++.|+.+|+.+.+|..+. .|-.+..-++ +...|++.+-.-+++|..+|.++++. T Consensus 371 ~n~~G~~D~syLDi~T~~tl~yvr~~~r~~i~~kfpR~KLa~dg~~~~~gq~IvTp~~ir~ell~~y~~le~~givEn~~ 450 (498) T protein:vir:45 371 KNAYGVADNSYLDSETLHTSAYVLRKLKSVITSKYGRHKLASDGTRFGPGQAIVTPAVIKGELLATYRQLERAGIVENYE 450 (498) T ss_pred ecCCCCcchhhhhhhhHHHHHHHHHHHHHHhhhhcCCeeecccCcccCCCCcccchHHHHHHHHHHHHhhhhhccccChh Confidence 245669999999999999999998764 5655543332 67889999999999999999999864 Q ss_pred e---eeecChhhhhCCEEEEEEEEEccccccE----EEEEEEEeC Q lcl|Aclame:pro 680 F---RLVVTPQQELLGEGSIELSLEAPNELRR----LTTIVSLSA 717 (717) Q Consensus 680 ~---~~~~t~~~i~~G~l~v~i~v~P~~p~e~----I~v~i~~ta 717 (717) . ......+..+.+|+.+.+-...+.+++- |.|++-++. T Consensus 451 ~~~~~LiVerd~~dpnRln~~~p~d~vn~L~V~A~~~~f~lq~~~ 495 (498) T protein:vir:45 451 LFKQYLVVERDASVPNRLNTLFPPDYVNQLRVFAVVNQFRLQYSE 495 (498) T ss_pred hhcceeEEEECCCCCcEEEEEecccccCchhhhhhhhhhheehhh Confidence 2 2233333344566666555444444443 223333333 No 51 >protein:vir:489 Length: 498 # NCBI annotation: putative sheath protein # Family: family:all:369 # MgeID: mge:11 # MgeName: P27 # Cross-refs: genbank:acc:NP_543096;swissprot:trembl:q8w623;genbank:gi:18249908;uniprot:Q8W623;genbank:GeneID:929698 Probab=99.60 E-value=4.4e-15 Score=99.28 Aligned_cols=447 Identities=13% Similarity=0.118 Sum_probs=227.3 Q ss_pred CC-cchhccc---CCceeEEEecCccccCcCCCCCcceeEEEEEeeccC---CcccceecC-HHHHHHhhCCcccccCCc Q lcl|Aclame:pro 1 MA-GFDQYQA---IPGHNARFKDGNLNLKSDPNPRETESVVLLGTATDG---PVMQPVRVT-PETAYNIFGKVAHENGVY 72 (717) Q Consensus 1 ~~-~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g---p~~~~~~~~-~~~~~~~fg~~~~~~~~~ 72 (717) |. .|++-|+ .||.|+||..++.....+ ++.++++|-...+ |.++|++|+ .+++...||+ T Consensus 1 M~IsF~~IP~~iRvP~~y~E~dns~A~~~~~-----~qrvLiiGq~la~gt~~~~~~v~v~s~~~a~~~fG~-------- 67 (498) T protein:vir:48 1 MTISFSAVPSDTLVPLFYAEMDNSAANTAVT-----SAPALLIGHASNDAAIEVNSLVLMPSADYARQICGA-------- 67 (498) T ss_pred CCccccccCcccccceEEEEEecCCCccccC-----CcceEEEeecCccccccccceEEecCHHHHHHhcCc-------- Confidence 43 5888775 699999999988755444 3679999988865 789999995 5778989995 Q ss_pred chHHHHHHHHHHHHccCC--cEEEEEEecCcceeeeeecccccccccccCCcccceeecCcccceeeccCCcceeeeEEE Q lcl|Aclame:pro 73 NGATLLPKFEELWAAGNR--DIRLMRTTGVNAVSSLLGTSYSKNSKEVAEDKLGGAQARGNVAATFTLPNGGIVEATFLL 150 (717) Q Consensus 73 ~~~~~~~~~~~~~~~~~~--~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (717) |..++.|..+|++-+. ++|++=+. |. .| ..+.|.+.++=+...+|-+ + + T Consensus 68 --GS~l~~M~~a~~~~n~~~~l~~i~~~------------D~----------ag-~aA~g~it~tg~at~~G~l---~-l 118 (498) T protein:vir:48 68 --GSQLARMVDVYRQTDPFGELYVIAVP------------EA----------RG-AAATVRVTVTGEAEESGTL---S-L 118 (498) T ss_pred --ccHHHHHHHHHHHhCCCceeEEEeeC------------Cc----------cc-ceeEEEEEecccccCCceE---E-E Confidence 5557778888876554 34444332 11 11 2233333322111111111 0 1 Q ss_pred eecceeecCceeEeccccceeeccccccchhheeecCCcccccccceeehhhhhhhhheeeeeeeEeecccccccccCcc Q lcl|Aclame:pro 151 KARGVIIPPNNYTLDVGTEEDMKAGTQPTFAQVLLNENVADMESEITVSYEFTYKDAQGETKTSEVLDNNTDKDGKPMIA 230 (717) Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~gelld~~ie~~~~p~~~ 230 (717) |--|+.+ .+.+.. .-+..++ ... |.+.|. T Consensus 119 ~Igg~~v-----~v~V~~--------gdTaa~v-----------------A~a-------------l~aai~-------- 147 (498) T protein:vir:48 119 YVGRSSV-----QVPVVN--------GDDATAV-----------------ATA-------------IKEAVN-------- 147 (498) T ss_pred EECCEEE-----EEeecC--------CCCHHHH-----------------HHH-------------HHHHHh-------- Confidence 1111100 110000 0000000 000 000011 Q ss_pred cCCceEEEEEeeccccceeeecCccccccchheeccceeEEEEecCccccceEEEEeecccccccccceEEEeecccccc Q lcl|Aclame:pro 231 KGADVTIKLEHVALAGLKLYADGIEVVDAKAFTVAGDQLTIHSNSKMKLGASLEAQYAYNLVEVIQPVIELESIFGGGVY 310 (717) Q Consensus 231 ~~ag~i~a~r~~~a~~a~~~~~g~~~~~s~~~g~~an~i~v~l~d~~~t~~~l~v~~a~~~~~~~~d~i~l~a~~~G~~G 310 (717) + .-.+.|. -.. .-..++|+|++.|+.| T Consensus 148 ----------------a---~~~lPVT-------------A~~---------------------~~~~VtlTAr~kG~~G 174 (498) T protein:vir:48 148 ----------------G---VITLPFA-------------ASS---------------------DAGVVTLTARHKGLYG 174 (498) T ss_pred ----------------C---CCCcceE-------------EEe---------------------cCcEEEEEeeeccccc Confidence 0 0011110 000 0023689999999999 Q ss_pred ceEEEEEecCCceEEEEEeeeccCccceeeeeeeeccccchhHHHHHHHhhcCccceeEEeeeccccccccccccchhhh Q lcl|Aclame:pro 311 NDIMRKVESKDGAVTVTITKPESKRGMISEDPLVFKSGDYTNFKMLVDAINNHPFNNVVRARTKPEFEATFTSTLQAAAD 390 (717) Q Consensus 311 N~i~I~v~~~~~~~t~~lt~~~~~~~~~~~~~~~l~~g~~~~~~~lv~~IN~~~~~~~~~a~~~~~~~~~l~s~~~~~~~ 390 (717) |.|.++++..... .|. ..|.-..+. - T Consensus 175 N~I~l~~~~~~~~-----------------------~ge------------~~p~Glt~~-------------------i 200 (498) T protein:vir:48 175 NELPVCLNYYGSG-----------------------GGE------------ILPAGLQVV-------------------T 200 (498) T ss_pred ccceeeeeeccCc-----------------------ccc------------cccceeeEE-------------------E Confidence 9999887432210 000 000000000 0 Q ss_pred hhccCCccCcccchhhhhhhcccccccccchhhhhhhhccccccceeEEeccccCCcccccccchhHHHHHHHHHHHhh- Q lcl|Aclame:pro 391 AKFSGGKDELSLDKEEMYKRLGGEKNEEGFVTKQGAYQYLENYEVDYVIPLGVHADTKLIGKYDDFAYQLALACAVMSH- 469 (717) Q Consensus 391 ~~ltgG~dG~~~~a~e~~~al~~~~~~~~~v~~~~~~~~le~~~vd~vi~~~~~a~t~~~~~~~~~~~~~a~~~~~~s~- 469 (717) ..++||. |. .++..++. .+....+|+++... .|+.. ...+.+|+...+. T Consensus 201 tamsgGa-g~----PDia~aLa----------------al~~~~~~~I~~p~--~D~as-------l~al~~~L~~~sgR 250 (498) T protein:vir:48 201 EAGTAGS-GA----PDLTAAVA----------------AMGDEAFDFIGLPF--NDAAS-------INMMMTEMNDSSGR 250 (498) T ss_pred EcccCCc-cC----cchHHHHH----------------hhccCCccEEEEee--cCHHH-------HHHHHHHHhhhhhh Confidence 0123331 10 01111111 12234455554432 22211 1234444433221 Q ss_pred ----cccceeEEecCCCcchhhHHHHHHHHHHHHhhhhhhhhcccccccccchhhhhccccceeEEEeCcEEEEecccCc Q lcl|Aclame:pro 470 ----YNSVTIGIIPTTTPSDISLAGVEEHVKKLENYANEFYMRDRFGNIIFDADRNKIDLGQFIEVVAGPDFIVRNTRLG 545 (717) Q Consensus 470 ----~~~~~i~ii~~~~~~~~~~a~v~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~v~~p~~~v~~~~~~~ 545 (717) ..+..+.+.+.. . .++.+..+... ++ ++++.+.+ +.+ T Consensus 251 w~~~~q~~g~~~~a~~---g-T~~~l~t~g~~----------------------~N----~~~it~~~-----~~~---- 291 (498) T protein:vir:48 251 WSYARQLYGHVYTAKL---G-TLSELVNAGDM----------------------HN----QQHITLAG-----YEK---- 291 (498) T ss_pred hhHHhhcCeEEEEecc---C-CHHHHHHhhhc----------------------cC----CceEEEEe-----cCC---- Confidence 112222332211 1 12222222110 00 11122111 111 Q ss_pred ceeech---hHHHHHHHh---cCCcccccCCceecccc--cccccCCHHHHHHHHhCCcEEEEEEcCceEEEEeceecCC Q lcl|Aclame:pro 546 QMASTP---DASYIGMVS---QLKTQSAPTNKPLPSVT--ALRYTYSANQLNRLTKARFATFKYKQDGSIGVVDAPTSAH 617 (717) Q Consensus 546 ~~~~p~---ag~vAGl~A---~~gv~~SpaNk~L~gv~--~l~~~lt~~e~d~L~~~GI~~ir~~~g~G~~v~g~rTt~s 617 (717) ....|+ ++.+|++.| ..+|-.+...-.|+|+. .+...|+..|++.|..+||.+++- .++.+++...+|++. T Consensus 292 ~~~~p~~~~AAa~a~~aA~~l~~DPArPLqtl~L~Gi~~p~~~~r~~~~ern~LL~~Gist~~V-~~G~V~I~R~ITTY~ 370 (498) T protein:vir:48 292 ETQSPVDELVASRLAREAVFIRNDPARPTQTGELVGMLPAPKGKRFIMTEQQTLLSHGVATAYV-EGGTLRIQRSVTTYK 370 (498) T ss_pred CCCChHHHHHHHHHHHHHHhhhccccccccceeeeccccCCchhcCChHHHHHHHhcCcceEEE-cCCeEEEEeeeeeee Confidence 111232 344555554 45676666667888887 556679999999999999999975 677799999999852 Q ss_pred ------CCccceeeehhhhHHHHHHHHHHHHH-HhccccCCHH-----------HHHHHHHHHHHHHHHHHhCCceecce Q lcl|Aclame:pro 618 ------AGSDYTRLSTARIVKEAVNAVREVAD-PFIGEPNDTG-----------NRNALTAAVDKRLSKMIENKALLGFD 679 (717) Q Consensus 618 ------~ds~~~~I~vrR~~d~I~~~I~~~~~-~~IgepN~~~-----------~~~~i~~~I~~fL~~L~~~GaI~G~~ 679 (717) .|+.|..|++.|+.+|+.+.+|..+. .|-.+..-++ +...|++.+-.-+++|..+|.++++. T Consensus 371 ~n~~G~~D~syLDi~T~~tl~yvr~~~r~~i~~kfpR~KLa~dg~~~~~gq~IvTp~~ir~eli~~y~~le~~given~~ 450 (498) T protein:vir:48 371 KNAYGVADNSYLDSETLHTSAYVLRKLKSVITSKYGRHKLANDGTRFGPGQAIVTPAVIKGELLATYRQMERAGIVENYD 450 (498) T ss_pred ecCCCCcchhhhhhhhHHHHHHHHHHHHHHhhhhcCCceecccCcccCCCCcccchHHHHHHHHHHHHhhhhhccccChh Confidence 35669999999999999999998764 5655443332 67889999999999999999999864 Q ss_pred e---eeecChhhhhCCEEEEEEEEEccccccEE----EEEEEEeC Q lcl|Aclame:pro 680 F---RLVVTPQQELLGEGSIELSLEAPNELRRL----TTIVSLSA 717 (717) Q Consensus 680 ~---~~~~t~~~i~~G~l~v~i~v~P~~p~e~I----~v~i~~ta 717 (717) . ......+..+.+|+.+.+-...+.+++-+ .|++-++. T Consensus 451 ~~~~~LiVerd~~dpnRln~~~p~d~vn~L~V~A~~~~f~lq~~~ 495 (498) T protein:vir:48 451 LFKQYLIVERDADNPNRLNTLFPPDYVNQLRVFAVVNQFRLQYSE 495 (498) T ss_pred hhcceeEEEECCCCCcEEEEEecccccCchhhhhhhhhhhhhhhh Confidence 2 22333333445666665555444444432 22222222 No 52 >protein:vir:1996 Length: 495 # NCBI annotation: major tail subunit # Family: family:all:369 # MgeID: mge:320 # MgeName: Mu # Cross-refs: genbank:acc:NP_050643;genbank:gi:9633530;genbank:GeneID:2636269 Probab=99.60 E-value=2e-14 Score=95.73 Aligned_cols=453 Identities=14% Similarity=0.169 Sum_probs=227.9 Q ss_pred CCc--chhccc---CCceeEEEecCccccCcCCCCCcceeEEEEEeeccC---CcccceecC-HHHHHHhhCCcccccCC Q lcl|Aclame:pro 1 MAG--FDQYQA---IPGHNARFKDGNLNLKSDPNPRETESVVLLGTATDG---PVMQPVRVT-PETAYNIFGKVAHENGV 71 (717) Q Consensus 1 ~~~--~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g---p~~~~~~~~-~~~~~~~fg~~~~~~~~ 71 (717) |++ |++-|+ .||+|+||..+....+.+ .-.+.++|+|-...+ |.++|++|+ .+++...||+ T Consensus 1 m~~i~F~~IP~~iRvP~~y~E~dns~A~~g~~---~~~q~vLiiGq~la~gs~~~~~pv~v~s~~~a~~~fG~------- 70 (495) T protein:vir:19 1 MSDISFNAIPSDVRVPLTYIEFDNSNAVSGTP---APRQRVLMFGQSGSKASAAPNVPVRIRSGSQASAAFGQ------- 70 (495) T ss_pred CCCCchhhCCcccccCeEEEEEccCCCCcCCc---CCCceEEEEEecCcccccccceeEEecCHHHHHHhcCc------- Confidence 775 888775 799999999998855544 344678888876654 779999995 5688989995 Q ss_pred cchHHHHHHHHHHHHccCC--cEEEEEEecCcceeeeeecccccccccccCCcccceeecCcccceeeccCCcceeeeEE Q lcl|Aclame:pro 72 YNGATLLPKFEELWAAGNR--DIRLMRTTGVNAVSSLLGTSYSKNSKEVAEDKLGGAQARGNVAATFTLPNGGIVEATFL 149 (717) Q Consensus 72 ~~~~~~~~~~~~~~~~~~~--~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (717) |-.++.|.++|++-+. ++|++=+. |. .| ..+.|.+.++=+...+|-+ + T Consensus 71 ---GS~la~M~~a~~~~n~~~~l~~i~~~------------D~----------aG-~aA~g~it~tg~at~~G~l---~- 120 (495) T protein:vir:19 71 ---GSMLALMADAFLNANRVAELWCIPQG------------NG----------TG-NAAVGEISLSGTAGENGSL---V- 120 (495) T ss_pred ---CcHHHHHHHHHHHhCCcceEEEEeeC------------Ch----------hh-ceeEEEEEEeecCCCCcEE---E- Confidence 4556777778876554 34444332 11 11 2333443333111111111 0 Q ss_pred EeecceeecCceeEeccccceeeccccccchhheeecCCcccccccceeehhhhhhhhheeeeeeeEeecccccccccCc Q lcl|Aclame:pro 150 LKARGVIIPPNNYTLDVGTEEDMKAGTQPTFAQVLLNENVADMESEITVSYEFTYKDAQGETKTSEVLDNNTDKDGKPMI 229 (717) Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~gelld~~ie~~~~p~~ 229 (717) +|--|+.+ .+.+.. .-+..++ ...+. +.|. T Consensus 121 l~I~g~~v-----~v~V~~--------gdTaa~v-----------------A~al~-------------aain------- 150 (495) T protein:vir:19 121 TYIAGQRL-----AVSVAA--------GATGAAL-----------------ADLLV-------------ARIK------- 150 (495) T ss_pred EEECCEEE-----EEEecC--------CCCHHHH-----------------HHHHH-------------HHhc------- Confidence 11111110 010000 0000000 00000 0000 Q ss_pred ccCCceEEEEEeeccccceeeecCccccccchheeccceeEEEEecCccccceEEEEeecccccccccceEEEeeccccc Q lcl|Aclame:pro 230 AKGADVTIKLEHVALAGLKLYADGIEVVDAKAFTVAGDQLTIHSNSKMKLGASLEAQYAYNLVEVIQPVIELESIFGGGV 309 (717) Q Consensus 230 ~~~ag~i~a~r~~~a~~a~~~~~g~~~~~s~~~g~~an~i~v~l~d~~~t~~~l~v~~a~~~~~~~~d~i~l~a~~~G~~ 309 (717) + .-.+.| +-..+-. .......-.++|+|++.|+ T Consensus 151 -----------------a---~~~lPv-------------TA~~~~~-------------~~~~~a~~~VtlTAr~kG~- 183 (495) T protein:vir:19 151 -----------------G---QPDLPV-------------TAEVRAD-------------SGDDDTHADVVLSAKFTGA- 183 (495) T ss_pred -----------------C---CccCce-------------EEEeecc-------------CCCCcCceeEEEEEeeccc- Confidence 0 000111 0000000 0000111346899999997 Q ss_pred cceEEEEEecCCceEEEEEeeeccCccceeeeeeeeccccchhHHHHHHHhhcCccceeEEeeeccccccccccccchhh Q lcl|Aclame:pro 310 YNDIMRKVESKDGAVTVTITKPESKRGMISEDPLVFKSGDYTNFKMLVDAINNHPFNNVVRARTKPEFEATFTSTLQAAA 389 (717) Q Consensus 310 GN~i~I~v~~~~~~~t~~lt~~~~~~~~~~~~~~~l~~g~~~~~~~lv~~IN~~~~~~~~~a~~~~~~~~~l~s~~~~~~ 389 (717) +|.|.|+++--+++.+ ..+ +... T Consensus 184 ~n~idi~~~~~~ge~~--------p~G-lt~t------------------------------------------------ 206 (495) T protein:vir:19 184 LSAVDVRWNYYAGETT--------PYG-IITA------------------------------------------------ 206 (495) T ss_pred cccceeEEEeeccccc--------ccc-eeEE------------------------------------------------ Confidence 6888877643221110 000 0000 Q ss_pred hhhccCCccCcccchhhhhhhcccccccccchhhhhhhhccccccceeEEeccccCCcccccccchhHHHHHHHHHHHhh Q lcl|Aclame:pro 390 DAKFSGGKDELSLDKEEMYKRLGGEKNEEGFVTKQGAYQYLENYEVDYVIPLGVHADTKLIGKYDDFAYQLALACAVMSH 469 (717) Q Consensus 390 ~~~ltgG~dG~~~~a~e~~~al~~~~~~~~~v~~~~~~~~le~~~vd~vi~~~~~a~t~~~~~~~~~~~~~a~~~~~~s~ 469 (717) -..++||. |. .++..++. .+....+|+++.. |.|+.. ...+.+|+..... T Consensus 207 itamsgGa-g~----PDia~ala----------------al~~~~~~~I~~P--~tD~as-------L~al~~~l~~rw~ 256 (495) T protein:vir:19 207 FKAASGKN-GN----PDISASIA----------------GMGDLQYKYIVMP--YTDEPN-------LNLLRTELQERWG 256 (495) T ss_pred EEecCCCC-CC----cchHHHHH----------------HhccCCCcEEEEe--cCcHHH-------HHHHHHHHHHhhh Confidence 00122221 10 01111111 1233445555543 222211 1234444432111 Q ss_pred cccce--eEEecCCCcchhhHHHHHHHHHHHHhhhhhhhhcccccccccchhhhhccccceeEEEeCcEEEEecccCcce Q lcl|Aclame:pro 470 YNSVT--IGIIPTTTPSDISLAGVEEHVKKLENYANEFYMRDRFGNIIFDADRNKIDLGQFIEVVAGPDFIVRNTRLGQM 547 (717) Q Consensus 470 ~~~~~--i~ii~~~~~~~~~~a~v~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~v~~p~~~v~~~~~~~~~ 547 (717) .-+.+ +.+.+.. . .++.+..+... ++ ++++.+.+ + ++ . T Consensus 257 ~~~q~~g~~~~a~~---g-T~~~l~t~g~~----------------------~N----~~~it~~~-----~----~g-s 296 (495) T protein:vir:19 257 PVNQADGFAVTVLS---G-TYGDISTFGVS----------------------RN----DHLISCMG-----I----AG-A 296 (495) T ss_pred HHHhcCeEEEEeec---C-CHHHHHHhhhc----------------------cC----CceEEEEe-----c----CC-C Confidence 11111 2222111 1 11222211110 00 11222111 0 11 1 Q ss_pred eech---hHHHHHHHh---cCCcccccCCceecccc--cccccCCHHHHHHHHhCCcEEEEEEcCceEEEEeceecCC-- Q lcl|Aclame:pro 548 ASTP---DASYIGMVS---QLKTQSAPTNKPLPSVT--ALRYTYSANQLNRLTKARFATFKYKQDGSIGVVDAPTSAH-- 617 (717) Q Consensus 548 ~~p~---ag~vAGl~A---~~gv~~SpaNk~L~gv~--~l~~~lt~~e~d~L~~~GI~~ir~~~g~G~~v~g~rTt~s-- 617 (717) ..|| ++.+|+..| ..+|..+...-.|+|+. .+...|+..|++.|..+||.++.--.++-+.|...+|++. T Consensus 297 p~~~~~~AAA~aa~~A~~l~~DPArPL~tl~L~Gi~~p~~~~r~~~~ern~LL~~Gist~~V~~~G~V~I~R~ITTY~~n 376 (495) T protein:vir:19 297 PEPSYLYAATLCAVASQALSIDPARPLQTLTLPGRMPPAVGDRFTWSERNALLFDGISTFNVNDGGEMQIERMITMYRTN 376 (495) T ss_pred CCcHHHHHHHHHHHHHHHhhcccccccCceeecceecCCccccCChHHHHHHHhCCcceEEECCCCeEEEEeeeeeeeec Confidence 1223 234444443 45777777777899987 5566799999999999999999755666789999999852 Q ss_pred ----CCccceeeehhhhHHHHHHHHHHHH-HHhccccCCHH-----------HHHHHHHHHHHHHHHHHhCCceeccee- Q lcl|Aclame:pro 618 ----AGSDYTRLSTARIVKEAVNAVREVA-DPFIGEPNDTG-----------NRNALTAAVDKRLSKMIENKALLGFDF- 680 (717) Q Consensus 618 ----~ds~~~~I~vrR~~d~I~~~I~~~~-~~~IgepN~~~-----------~~~~i~~~I~~fL~~L~~~GaI~G~~~- 680 (717) .|+.|..|++.|+++|+.+.+|... ..|-.++.-++ +-..|++.+-.-+++|..+|.++++.. T Consensus 377 ~~G~~D~syLDi~T~~tl~yvr~~~r~~i~~kfpR~KLa~d~~~~~~gq~IvTp~~ir~ell~~~~~le~~given~~~~ 456 (495) T protein:vir:19 377 KYGDSDPSYLNVNTIATLSYLRYSLRTRITQKFPNYKLASDGTRFATGQAVVTPSVIKTELLALFEEWENAGLVEDFDTF 456 (495) T ss_pred CCCCcchhhhhhHHHHHHHHHHHHHHHHHhhhcCCcccccCCCCCCCcccccChHHHHHHHHHHHHhhhhhccccChhhh Confidence 3556999999999999999999765 45655543332 567899999999999999999998642 Q ss_pred --eeecChhhhhCCEEEEEEEEEccccccEEEEEEEEeC Q lcl|Aclame:pro 681 --RLVVTPQQELLGEGSIELSLEAPNELRRLTTIVSLSA 717 (717) Q Consensus 681 --~~~~t~~~i~~G~l~v~i~v~P~~p~e~I~v~i~~ta 717 (717) ......+..+.+|+.+.+-...+..++-+-.++.|-= T Consensus 457 ~~~LiVerd~~dpnRln~~~p~d~vn~L~V~A~~i~f~L 495 (495) T protein:vir:19 457 KEELYVARNKDDKDRLDVLCGPNLINQFRIFAAQVQFIL 495 (495) T ss_pred cceeEEEECCCCCcEEEEEecceeeCceeeeeeeeeeeC Confidence 2333334445577777666665665554322222222 No 53 >protein:vir:4463 Length: 498 # NCBI annotation: Tail Sheath protein # Family: family:all:369 # MgeID: mge:96 # MgeName: ST64B # Cross-refs: genbank:acc:NP_700386;genbank:gi:23505458;genbank:GeneID:955665 Probab=99.59 E-value=8.9e-15 Score=97.61 Aligned_cols=441 Identities=16% Similarity=0.165 Sum_probs=217.4 Q ss_pred CC-cchhccc---CCceeEEEecCccccCcCCCCCcceeEEEEEeeccC---CcccceecC-HHHHHHhhCCcccccCCc Q lcl|Aclame:pro 1 MA-GFDQYQA---IPGHNARFKDGNLNLKSDPNPRETESVVLLGTATDG---PVMQPVRVT-PETAYNIFGKVAHENGVY 72 (717) Q Consensus 1 ~~-~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g---p~~~~~~~~-~~~~~~~fg~~~~~~~~~ 72 (717) |. .|++-|+ .||+|+||..+.. -.+...+.++|+|-...+ |.++||+|+ .+++...||. T Consensus 1 M~IsF~~IP~~iRvP~~y~E~dns~A-----~~~~~~q~vLiiGq~la~gs~~~~~~v~v~s~~~a~~~fG~-------- 67 (498) T protein:vir:44 1 MAISFNSIPSDTRVPLFYAEMDNSAA-----NTARDSGASLLIGHASNDASIAVNSLVLVSSVDYARQICGA-------- 67 (498) T ss_pred CCCchhhcCcccccCeEEEEEeCCCC-----CCCcCCcceEEEEecCcccccccceeEeecCHHHHHHhcCc-------- Confidence 53 5888775 7999999976555 234444679999988765 779999995 5578989995 Q ss_pred chHHHHHHHHHHHHccCC--cEEEEEEecCcceeeeeecccccccccccCCcccceeecCcccceeeccCCcceeeeEEE Q lcl|Aclame:pro 73 NGATLLPKFEELWAAGNR--DIRLMRTTGVNAVSSLLGTSYSKNSKEVAEDKLGGAQARGNVAATFTLPNGGIVEATFLL 150 (717) Q Consensus 73 ~~~~~~~~~~~~~~~~~~--~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (717) |-.++.|..+|++-+. ++|++=+. |. . |..+.|.+.++=+...+|-+ .+ T Consensus 68 --GSml~~M~~a~~~~n~~~~l~~i~~~------------D~----------a-G~aAtg~it~tg~at~~G~l----~l 118 (498) T protein:vir:44 68 --GSQLARMVGAYRKTDPFGELYVIAVP------------ES----------T-GAAATVALTVTGEATETGTV----NV 118 (498) T ss_pred --ccHHHHHHHHHHHhCCCceeEEEecC------------Cc----------c-cceeEEEEEeecccCCCcEE----EE Confidence 4557778888876554 33433222 11 1 12333333322111111111 01 Q ss_pred eecceeecCceeEeccccceeeccccccchhheeecCCcccccccceeehhhhhhhhheeeeeeeEeecccccccccCcc Q lcl|Aclame:pro 151 KARGVIIPPNNYTLDVGTEEDMKAGTQPTFAQVLLNENVADMESEITVSYEFTYKDAQGETKTSEVLDNNTDKDGKPMIA 230 (717) Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~gelld~~ie~~~~p~~~ 230 (717) |--|+.+ .+.+.. .-+..++ ... |.+.|. T Consensus 119 ~Igg~~v-----~v~V~~--------gdTaa~v-----------------A~a-------------l~aain-------- 147 (498) T protein:vir:44 119 YTGRTRV-----QAPVTS--------GDDAAAV-----------------AVS-------------IKDAVN-------- 147 (498) T ss_pred EECCEEE-----EEEecC--------CCCHHHH-----------------HHH-------------HHHHHh-------- Confidence 1111110 010000 0000000 000 000011 Q ss_pred cCCceEEEEEeeccccceeeecCccccccchheeccceeEEEEecCccccceEEEEeecccccccccceEEEeecccccc Q lcl|Aclame:pro 231 KGADVTIKLEHVALAGLKLYADGIEVVDAKAFTVAGDQLTIHSNSKMKLGASLEAQYAYNLVEVIQPVIELESIFGGGVY 310 (717) Q Consensus 231 ~~ag~i~a~r~~~a~~a~~~~~g~~~~~s~~~g~~an~i~v~l~d~~~t~~~l~v~~a~~~~~~~~d~i~l~a~~~G~~G 310 (717) +. -.+.|. -.. .-..++|+|++.|+.| T Consensus 148 ----------------a~---~~lPVT-------------A~~---------------------~~~~vtlTAr~kG~~G 174 (498) T protein:vir:44 148 ----------------AN---PDLPFT-------------ATS---------------------EAGVVTLTARHKGLYG 174 (498) T ss_pred ----------------CC---CCCceE-------------Eee---------------------ccceEEEEEeccCccc Confidence 00 011110 000 0023689999999999 Q ss_pred ceEEEEEecCC---ceE---EEEEeeeccCccceeeeeeeeccccchhHHHHHHHhhcCccceeEEeeeccccccccccc Q lcl|Aclame:pro 311 NDIMRKVESKD---GAV---TVTITKPESKRGMISEDPLVFKSGDYTNFKMLVDAINNHPFNNVVRARTKPEFEATFTST 384 (717) Q Consensus 311 N~i~I~v~~~~---~~~---t~~lt~~~~~~~~~~~~~~~l~~g~~~~~~~lv~~IN~~~~~~~~~a~~~~~~~~~l~s~ 384 (717) |.|.++++-.+ ++. -.+++...... +.|+ .++......+-+...+.+... T Consensus 175 N~I~l~~~~~~~~~ge~~p~Glt~titamsg----------Gag~-PDia~alaal~~~~~~~i~~p------------- 230 (498) T protein:vir:44 175 NEIPVTLNYYGFGGGEVLPAGVNITVASGVK----------GAGA-PALNDAVAAMGDEPFDYIGLP------------- 230 (498) T ss_pred CcceEEEeeccCccccccccceeEEEEcccC----------CccC-chhHHHHHhhccCCccEEEEe------------- Confidence 99999885332 111 11111111110 1111 122222223322221111100 Q ss_pred cchhhhhhccCCccCcccchhhhhhhcccccccccchhhhhhhhccccccceeEEeccccCCcccccccchhHHHHHHHH Q lcl|Aclame:pro 385 LQAAADAKFSGGKDELSLDKEEMYKRLGGEKNEEGFVTKQGAYQYLENYEVDYVIPLGVHADTKLIGKYDDFAYQLALAC 464 (717) Q Consensus 385 ~~~~~~~~ltgG~dG~~~~a~e~~~al~~~~~~~~~v~~~~~~~~le~~~vd~vi~~~~~a~t~~~~~~~~~~~~~a~~~ 464 (717) +.|+. -...+.+|+ T Consensus 231 -----------------------------------------------------------~~D~a-------sl~al~~~L 244 (498) T protein:vir:44 231 -----------------------------------------------------------FNDTA-------SVNSMATEM 244 (498) T ss_pred -----------------------------------------------------------ecCHH-------HHHHHHHHH Confidence 00000 001111222 Q ss_pred HHHhh-----cccceeEEecCCCcchhhHHHHHHHHHHHHhhhhhhhhcccccccccchhhhhccccceeEEEeCcEEEE Q lcl|Aclame:pro 465 AVMSH-----YNSVTIGIIPTTTPSDISLAGVEEHVKKLENYANEFYMRDRFGNIIFDADRNKIDLGQFIEVVAGPDFIV 539 (717) Q Consensus 465 ~~~s~-----~~~~~i~ii~~~~~~~~~~a~v~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~v~~p~~~v~ 539 (717) ...+. ..+..+.+.+. ...++.+..+.... + ++++.+.+ + T Consensus 245 ~~~sgRw~~~~q~~g~~~~a~----~gT~a~l~t~g~~~----------------------N----~~~it~~~-----~ 289 (498) T protein:vir:44 245 NDSSGRWSYVRQLYGHVYTAK----TGTLSELVAAGDQF----------------------N----LQHITLAG-----Y 289 (498) T ss_pred hhhhcchHHHhhcCeEEEEec----cCCHHHHHHhhhcc----------------------C----CceEEEEe-----c Confidence 11110 00111111111 11122222111100 0 11111110 0 Q ss_pred ecccCcceeech---hHHHHHHHh---cCCcccccCCceecccc--cccccCCHHHHHHHHhCCcEEEEEEcCceEEEEe Q lcl|Aclame:pro 540 RNTRLGQMASTP---DASYIGMVS---QLKTQSAPTNKPLPSVT--ALRYTYSANQLNRLTKARFATFKYKQDGSIGVVD 611 (717) Q Consensus 540 ~~~~~~~~~~p~---ag~vAGl~A---~~gv~~SpaNk~L~gv~--~l~~~lt~~e~d~L~~~GI~~ir~~~g~G~~v~g 611 (717) .+.. ..|+ ++.+|+..| +.+|-.+...-.|+|+. .+...|+..|++.|..+||.+++--+| -++|.. T Consensus 290 ~~~~----~sp~~~~AAa~a~~aA~~l~~DPArPL~tl~L~Gi~~p~~~~r~~~~ern~LL~~Gist~~V~~G-~V~I~R 364 (498) T protein:vir:44 290 EKDT----QTPADELAASRTARAAVFIRNDPARPTQTGELVDMLPAPKGKRFTTTEQQTLLSHGVATAYVESG-VLRIQR 364 (498) T ss_pred CCCC----CCHHHHHHHHHHHHHHHHhhcccccccCceeecccccCCchhcCChHHHHHHHhcCcceEEEcCC-eEEEEe Confidence 1110 1122 344555555 45777666677888887 456779999999999999999975444 588999 Q ss_pred ceecC------CCCccceeeehhhhHHHHHHHHHHHHH-HhccccCCH-----------HHHHHHHHHHHHHHHHHHhCC Q lcl|Aclame:pro 612 APTSA------HAGSDYTRLSTARIVKEAVNAVREVAD-PFIGEPNDT-----------GNRNALTAAVDKRLSKMIENK 673 (717) Q Consensus 612 ~rTt~------s~ds~~~~I~vrR~~d~I~~~I~~~~~-~~IgepN~~-----------~~~~~i~~~I~~fL~~L~~~G 673 (717) .+|++ ..|+.|..|++.|+.+|+.+.+|..+. .|-.++.-+ .+...|++.+-.-+++|..+| T Consensus 365 ~ITTY~~n~~G~~D~syLDi~T~~tl~yvr~~~r~~i~~kfpR~KLa~d~~~~~~gq~IvTp~~ir~eli~~y~~le~~g 444 (498) T protein:vir:44 365 DITTYRKNAYGVADNSYLDSETLHTSAYVLRRLKSVITSKYGRHKLANDGTRFGSGQAIVTPAVIRGELGSTYRQMEREG 444 (498) T ss_pred eeeeeeecCCCCcchhhhhhhhHHHHHHHHHHHHHHhhhhcCCcccccCCcccCCCcccccHHHHHHHHHHHHHhhhhhc Confidence 99984 245669999999999999999998664 565554222 267789999999999999999 Q ss_pred ceeccee---eeecChhhhhCCEEEEEEEEEccccccEE----EEEEEEeC Q lcl|Aclame:pro 674 ALLGFDF---RLVVTPQQELLGEGSIELSLEAPNELRRL----TTIVSLSA 717 (717) Q Consensus 674 aI~G~~~---~~~~t~~~i~~G~l~v~i~v~P~~p~e~I----~v~i~~ta 717 (717) .++++.. ......+..+.+|+.+.+-...+.+++-+ .|++-++. T Consensus 445 ivEn~~~~~~~LiVerd~~dpnRln~~~p~d~vn~L~V~A~~~~f~lq~~~ 495 (498) T protein:vir:44 445 IVENFDLFQQHLIVERNANDSNRLDVLFPPDYVNQLRVFAVLNQFRLQYSE 495 (498) T ss_pred cccChhhhcceeEEEECCCCCcEEEEEecccccCchhhhhhhhhhhhhhhh Confidence 9998642 22333333445666665555445444432 22222222 No 54 >protein:vir:80488 Length: 562 # NCBI annotation: Tsh # Family: family:all:2449 # MgeID: mge:1883 # MgeName: A511 # Cross-refs: genbank:acc:YP_001468473;genbank:gi:157325048;genbank:GeneID:5601446 Probab=99.53 E-value=7.3e-15 Score=98.09 Aligned_cols=516 Identities=14% Similarity=0.079 Sum_probs=169.4 Q ss_pred CCcchhccc----CCceeEEEecCccccCcCCCCCcceeEEEEEeeccCCcccceec-CHHHHHHhhCCcccccCCcchH Q lcl|Aclame:pro 1 MAGFDQYQA----IPGHNARFKDGNLNLKSDPNPRETESVVLLGTATDGPVMQPVRV-TPETAYNIFGKVAHENGVYNGA 75 (717) Q Consensus 1 ~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~gp~~~~~~~-~~~~~~~~fg~~~~~~~~~~~~ 75 (717) |+ -+|||. -|||++|+.|+++ .++++.+|+++++||.|++||.+.|++| ++++|+++||. | T Consensus 1 ~~-~~~~~~~~~~~pgv~~~~~~s~~---~~~~~~~~~~~~~ig~a~~G~~~~~~~~~~~~~~~~~f~~----------g 66 (562) T protein:vir:80 1 MA-IEIYPRKPVSRPHTEISVDTSGI---GGSSSGSEKILCLVGSATGGKPNAVYKVRNYSQAKSVFRS----------G 66 (562) T ss_pred Ce-eeeeCCCcccCCceEEEEecCCc---ccCCCCCCceEEEEEEeCCCCcceeEEEccHHHHHHHhcC----------C Confidence 65 466654 6999999999999 9999999999999999999999999999 58999999984 5 Q ss_pred HHHHHHHHHH----HccCCcEEEEEEecCcceeeeeecccccccccccCCcccceeecCcccceeeccCCcceeeeEEEe Q lcl|Aclame:pro 76 TLLPKFEELW----AAGNRDIRLMRTTGVNAVSSLLGTSYSKNSKEVAEDKLGGAQARGNVAATFTLPNGGIVEATFLLK 151 (717) Q Consensus 76 ~~~~~~~~~~----~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (717) +|+.|.+.|| .+|+-+||.||+-+.++.+. ...+.+-.+...|.|+=.|+. T Consensus 67 ~l~~~i~~a~~~~~~~g~~~~~~~rv~~a~~a~~------------~~~~~~~~~~~~g~~~n~i~v------------- 121 (562) T protein:vir:80 67 ELLDAIERAWNPGEGTGAGDILAMRVEEAKEATF------------EAEGVKVSSTIYGADANDIQV------------- 121 (562) T ss_pred ChHHHHHHhcccccccCceEEEEEEcCCCCcceE------------EecceEEEEeecccCCCceEE------------- Confidence 5665555555 79999999999975443331 222333346666666622111 Q ss_pred ecceeecCceeEeccccceeeccccccchhheeecCCcccccccceeehhhhhhhhheeeeeeeEeeccccc---ccccC Q lcl|Aclame:pro 152 ARGVIIPPNNYTLDVGTEEDMKAGTQPTFAQVLLNENVADMESEITVSYEFTYKDAQGETKTSEVLDNNTDK---DGKPM 228 (717) Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~gelld~~ie~---~~~p~ 228 (717) .|. .+..|.+......-... .+.+.|.+- |.++. |.. .+.+. T Consensus 122 -----------~~~--------~~~~~~~~~~~v~~~~~--------~~~ev~~~~------g~v~~--i~y~g~~~~a~ 166 (562) T protein:vir:80 122 -----------ALE--------DNTITGTKRLSIVFAKE--------RVNQVYDNL------GSIFS--IKYKGTEASAT 166 (562) T ss_pred -----------EEe--------cCCCCCCcceEEEecCC--------cceEEeecc------Cceee--eeeccccccce Confidence 110 01111111000000000 011111110 11111 110 01110 Q ss_pred -c-ccCCceEEEEEeeccccceeeecCccccccchheeccceeEEEEecCccccceEEEEeecccccccccceEEEeecc Q lcl|Aclame:pro 229 -I-AKGADVTIKLEHVALAGLKLYADGIEVVDAKAFTVAGDQLTIHSNSKMKLGASLEAQYAYNLVEVIQPVIELESIFG 306 (717) Q Consensus 229 -~-~~~ag~i~a~r~~~a~~a~~~~~g~~~~~s~~~g~~an~i~v~l~d~~~t~~~l~v~~a~~~~~~~~d~i~l~a~~~ 306 (717) . ...+++..+++.. + ..|.+ ....+.|.++..... ....+..++...++|+|+ T Consensus 167 ~~i~~~~~~~~a~~l~------~-~~g~~-----------~v~~~~l~~g~~~~~-------~~l~~~i~~~~~~tAky~ 221 (562) T protein:vir:80 167 FTVAVDPVTFKATKLT------L-KAGDK-----------TVKEYDLGSGAYAET-------NVLISDINNLPDFEAKFF 221 (562) T ss_pred eEEEecCccceEEEEE------E-ecCCc-----------ceeEEEeCCCccchh-------hhhhhhhccccceEEEec Confidence 0 0111122222221 0 11111 122333433321110 011222334456899999 Q ss_pred ccccceEEEEEecCCceEEEEEeeeccCccceeeeeeeeccccchhHHHHHHHhhcCccceeEEeeecccc------ccc Q lcl|Aclame:pro 307 GGVYNDIMRKVESKDGAVTVTITKPESKRGMISEDPLVFKSGDYTNFKMLVDAINNHPFNNVVRARTKPEF------EAT 380 (717) Q Consensus 307 G~~GN~i~I~v~~~~~~~t~~lt~~~~~~~~~~~~~~~l~~g~~~~~~~lv~~IN~~~~~~~~~a~~~~~~------~~~ 380 (717) |..||.+.++....- ++...+....++ +. ...+.++....+.++.+.....+ ... T Consensus 222 g~~~n~i~~~~~d~~-------~~~~~kt~~~~v-----~~-------~~~d~~~~~~~n~~v~~~~~~~~~la~~~~~~ 282 (562) T protein:vir:80 222 PIGDKNLTTDNFDAQ-------IDVDIKTKEAYV-----KA-------VGGDIEKQTAYNGYVEFEFDRSKEIANFPLTK 282 (562) T ss_pred ccCCceeeecccccc-------hhhhcccceeee-----ee-------hhhhhhhcccccceEEEEeccCccccccceee Confidence 999999887542211 000100000000 00 00011122222222222111100 011 Q ss_pred cccccchhhhhhccCCccCcccchhhhhhhcccccc-------cccchhhhhhhhcc-----ccccceeEEeccccCCcc Q lcl|Aclame:pro 381 FTSTLQAAADAKFSGGKDELSLDKEEMYKRLGGEKN-------EEGFVTKQGAYQYL-----ENYEVDYVIPLGVHADTK 448 (717) Q Consensus 381 l~s~~~~~~~~~ltgG~dG~~~~a~e~~~al~~~~~-------~~~~v~~~~~~~~l-----e~~~vd~vi~~~~~a~t~ 448 (717) |+...+-+. ... -.++++.+..... .+.. ....+.+.. +.... +.+...... T Consensus 283 LtGG~dG~~---------~~~--~~dal~~Le~~~~~~i~~~t~d~a-i~~~~~a~vkr~r~~g~~~-~aVvg~~~~--- 346 (562) T protein:vir:80 283 LTGGDNGTI---------PES--WADKFSYFANEGGYYLVPLTSKQA-VHAEALQFVRDCSYNGNPM-RVFVGGGIG--- 346 (562) T ss_pred eeCCCCCCc---------ccc--HHHHHHHHHhCCcEEEEecCCChH-HHHHHHHHHHHHHhCCCeE-EEEecCCCC--- Confidence 111100000 000 0001111111000 0000 000011111 11111 112221111 Q ss_pred cccccchhHHHHHHHHHHHhhcccceeEEecCC-CcchhhHHHH----HHHHHHHHhhhhhhhhcccccccccchhhhhc Q lcl|Aclame:pro 449 LIGKYDDFAYQLALACAVMSHYNSVTIGIIPTT-TPSDISLAGV----EEHVKKLENYANEFYMRDRFGNIIFDADRNKI 523 (717) Q Consensus 449 ~~~~~~~~~~~~a~~~~~~s~~~~~~i~ii~~~-~~~~~~~a~v----~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 523 (717) .++ ..........+..++..+... .......... ..+.-.++.+ ..+... T Consensus 347 -----~~~----~~~~~~a~~~n~e~vv~v~~~~~~~~~~~~~~~~~~~~~aa~vAGl----------------~Ag~~~ 401 (562) T protein:vir:80 347 -----ESM----EQLFTRAIGLQNERAGLIGFSGTVKMDDGRSLKMPGYMFAAQVAGL----------------TCGLEI 401 (562) T ss_pred -----CCH----HHHHHHhhhcCCCeEEEEecCeeEECCCCceeeechhHHHHHHHHH----------------HhcCcc Confidence 111 111222223344444333110 0000000000 0000000000 001111 Q ss_pred cccceeEEEeCcEEEEecccCcceeechhHHHHHHHhcCCcccccCCc------eecccccccccCCHHHHHHHHhCCcE Q lcl|Aclame:pro 524 DLGQFIEVVAGPDFIVRNTRLGQMASTPDASYIGMVSQLKTQSAPTNK------PLPSVTALRYTYSANQLNRLTKARFA 597 (717) Q Consensus 524 ~~~~~~~v~~p~~~v~~~~~~~~~~~p~ag~vAGl~A~~gv~~SpaNk------~L~gv~~l~~~lt~~e~d~L~~~GI~ 597 (717) ..+.....+ +...+ ..++ ...-.-..+-++.-+-..--++ .++++..... -++.+...+ . T Consensus 402 ~~S~T~~~i-~~~~v------~~~l-t~~e~~~li~~G~l~l~~~~~~~v~~~riv~~itT~t~-~~~~~~~ki-----~ 467 (562) T protein:vir:80 402 GEAITFKNI-AIETL------DTIY-EGSQLDQLNESGIITAEFVRNRAVTNFRIVDDVTTFND-KTDPVKSEI-----G 467 (562) T ss_pred ccCccceee-ccccc------cccC-CHHHHHHHHhCCeEEEEEecCCcEEEEEeeccceeccC-CCCchhhhh-----h Confidence 111100101 00000 0000 1111111122211111111111 1112211110 011111111 1 Q ss_pred EEEEEcCceEEEEece-ecCCCCccceeeehhhhHHHHHHHHHHHHHHhccc--cCCHHHHHHHHHHHHHHHHHHHhCCc Q lcl|Aclame:pro 598 TFKYKQDGSIGVVDAP-TSAHAGSDYTRLSTARIVKEAVNAVREVADPFIGE--PNDTGNRNALTAAVDKRLSKMIENKA 674 (717) Q Consensus 598 ~ir~~~g~G~~v~g~r-Tt~s~ds~~~~I~vrR~~d~I~~~I~~~~~~~Ige--pN~~~~~~~i~~~I~~fL~~L~~~Ga 674 (717) ++|.+.. +..+. -+. .+.--.+.+.-+....+...|...++....+ .-+-. -..+. + .. ..+. T Consensus 468 viRv~D~----i~~dir~~~-~~~yIGk~Nn~~~r~~v~~~i~~~L~~l~~~gaI~~~~-~~dv~--v-----~~-~~d~ 533 (562) T protein:vir:80 468 VGEANDF----LVSELKISL-DNEYIGTKIIDTSASLVKNFVQSFLDRKKLAKEIQDYS-PEEVQ--V-----VI-EGDI 533 (562) T ss_pred hhHHHHH----HHHHHHHHH-HhcCCccccChHHHHHHHHHHHHHHHHHHhCCcccCCC-ccceE--E-----Ee-cCCE Confidence 1111100 00000 000 0000001222333344444555544433211 10000 00000 0 00 1111 Q ss_pred eecceeeeecChhhhhCCEEEEEEEEEccccccEEEEEEEEeC Q lcl|Aclame:pro 675 LLGFDFRLVVTPQQELLGEGSIELSLEAPNELRRLTTIVSLSA 717 (717) Q Consensus 675 I~G~~~~~~~t~~~i~~G~l~v~i~v~P~~p~e~I~v~i~~ta 717 (717) ..++....|- ..-.++++.+.+.|- +++| T Consensus 534 ---~~v~~~v~Pv-~~mekIy~ti~~~~~----------~~~~ 562 (562) T protein:vir:80 534 ---ARISLTVFPI-RSMKKIEVSLVYRQQ----------ILTA 562 (562) T ss_pred ---EEEEEEEEEc-ccceEEEEEEEEEee----------eecC Confidence 1122222221 223578888888872 2233 No 55 >protein:vir:63742 Length: 562 # NCBI annotation: Tsh # Family: family:all:2449 # MgeID: mge:1517 # MgeName: P100 # Cross-refs: genbank:gi:82547629;genbank:GeneID:3783475 Probab=99.51 E-value=4.4e-14 Score=93.80 Aligned_cols=440 Identities=15% Similarity=0.127 Sum_probs=153.8 Q ss_pred CCcchhccc----CCceeEEEecCccccCcCCCCCcceeEEEEEeeccCCcccceec-CHHHHHHhhCCcccccCCcchH Q lcl|Aclame:pro 1 MAGFDQYQA----IPGHNARFKDGNLNLKSDPNPRETESVVLLGTATDGPVMQPVRV-TPETAYNIFGKVAHENGVYNGA 75 (717) Q Consensus 1 ~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~gp~~~~~~~-~~~~~~~~fg~~~~~~~~~~~~ 75 (717) |+ -+|||. -|||++|+.|+++ .++++.+|+.+++||.|++||+++|++| ++++|+++||. | T Consensus 1 ~~-~~~~~~~~~~~Pgv~~~~~~s~~---~~~~~~~~~~~~~iG~a~~G~~~~~~~~~~~~~~~~~fg~----------g 66 (562) T protein:vir:63 1 MA-IEIYPRKPVSRPHTEISVDTSGI---GGSSSGSEKILCLVGSATGGKPNAVYKVRNYSQAKSVFRS----------G 66 (562) T ss_pred Ce-eeeeCCCcccCCceEEEEecCCC---cccCCCCCceEEEEEEeCCCCCceeEEEccHHHHHHHhcC----------C Confidence 65 456664 6999999999999 9999999999999999999999999999 58999999994 5 Q ss_pred HHHHHHHHHH----HccCCcEEEEEEecCcceeeeeecccccccccccCCcccceeecCcccceeeccCCcceeeeEEEe Q lcl|Aclame:pro 76 TLLPKFEELW----AAGNRDIRLMRTTGVNAVSSLLGTSYSKNSKEVAEDKLGGAQARGNVAATFTLPNGGIVEATFLLK 151 (717) Q Consensus 76 ~~~~~~~~~~----~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (717) +|+.|.+.|| ++|+.+||+||+-+.++.+ ..+.+..-.+..+|.|+=.|+-+ T Consensus 67 ~l~~~i~~a~~~~~~~g~~~~~~~rv~~a~~a~------------~~~~~~~~~a~~~g~~~n~i~v~------------ 122 (562) T protein:vir:63 67 ELLDAIERAWNPGEGTGAGDILAMRVEEAKEAT------------FEAEGVKVSSTIYGADANDIQVA------------ 122 (562) T ss_pred chHHHHHHhccccccCCceEEEEEEcCCCccce------------eEecceeEEEeecccCCCeEEEE------------ Confidence 5666666666 8999999999996433322 12233444577777777322211 Q ss_pred ecceeecCceeEeccccceeeccccccchhheeecCCcccccccceeehhhhhhhhheeeeeeeEeeccccc---ccccC Q lcl|Aclame:pro 152 ARGVIIPPNNYTLDVGTEEDMKAGTQPTFAQVLLNENVADMESEITVSYEFTYKDAQGETKTSEVLDNNTDK---DGKPM 228 (717) Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~gelld~~ie~---~~~p~ 228 (717) |.+ +..+.+.-........ .+.+.|.+ . |.++. |.. .+.+. T Consensus 123 ------------~~~--------~~~~~~~~~~v~~~~~--------~~~ev~~~---~---g~V~~--i~y~g~~~~~~ 166 (562) T protein:vir:63 123 ------------LED--------NTITGTKRLSIVFAKE--------RVNQVYDN---L---GSIFS--IKYKGTEASAT 166 (562) T ss_pred ------------Eec--------CCCCCCcceEEEecCC--------Ccchhhhh---c---cceee--eeeecccccce Confidence 100 0000000000000000 01222211 1 12221 111 11111 Q ss_pred -c-ccCCceEEEEEeeccccceeeecCccccccchheeccceeEEEEecCccccceEEEEeecccccccccceEEEeecc Q lcl|Aclame:pro 229 -I-AKGADVTIKLEHVALAGLKLYADGIEVVDAKAFTVAGDQLTIHSNSKMKLGASLEAQYAYNLVEVIQPVIELESIFG 306 (717) Q Consensus 229 -~-~~~ag~i~a~r~~~a~~a~~~~~g~~~~~s~~~g~~an~i~v~l~d~~~t~~~l~v~~a~~~~~~~~d~i~l~a~~~ 306 (717) . ...+++..+++..- ..|.+ ....+.|.++.... .....+..++...++++|+ T Consensus 167 ~~v~~~~~~~~a~~l~~-------~~g~~-----------~v~~~~L~~g~~~~-------~~~l~~~in~~~~~~aky~ 221 (562) T protein:vir:63 167 FTVAVDPVTFKATKLTL-------KAGDK-----------TVKEYDLGSGAYAE-------TNVLISDINNLPDFEAKFF 221 (562) T ss_pred EEEEecCcceeEEEEEe-------ecCCc-----------ceeEEEecCCccch-------hHHHHHhhccccceEEEee Confidence 0 11112233333211 11111 11223333332100 0112223344557899999 Q ss_pred ccccceEEEEEecCCceEEEEEeeeccCccceeeeeeeeccccchhHHHHHHHhhcCccceeEEeeeccccccccccccc Q lcl|Aclame:pro 307 GGVYNDIMRKVESKDGAVTVTITKPESKRGMISEDPLVFKSGDYTNFKMLVDAINNHPFNNVVRARTKPEFEATFTSTLQ 386 (717) Q Consensus 307 G~~GN~i~I~v~~~~~~~t~~lt~~~~~~~~~~~~~~~l~~g~~~~~~~lv~~IN~~~~~~~~~a~~~~~~~~~l~s~~~ 386 (717) |..||.+++++..... +...+.... |.. ....+.++....+.++..... +...+. T Consensus 222 ~~~gn~i~~~~~d~~~-------~~~vkt~~~-----------~v~-t~~~d~~~~~~~~~~v~~~~~--~~~~la---- 276 (562) T protein:vir:63 222 PIGDKNLTTDNFDAQI-------DVDIKTKEA-----------YVK-AVGGDIEKQTAYNGYVDFEFD--RSKEIA---- 276 (562) T ss_pred ccCCceeeeecccccc-------ccchhhhhh-----------hhh-hhhhhhhhcccccceeeeeec--ccccee---- Confidence 9999999875432111 001100000 000 011112233333333332211 111221 Q ss_pred hhhhhhccCCccCcccch-hhhhhhcccccccc--cchhhhh----hhhcc----c-cccceeEEeccccCCc------- Q lcl|Aclame:pro 387 AAADAKFSGGKDELSLDK-EEMYKRLGGEKNEE--GFVTKQG----AYQYL----E-NYEVDYVIPLGVHADT------- 447 (717) Q Consensus 387 ~~~~~~ltgG~dG~~~~a-~e~~~al~~~~~~~--~~v~~~~----~~~~l----e-~~~vd~vi~~~~~a~t------- 447 (717) ......|+||.||+...+ .++++.+......- .....+. +-+.. + ..+. +.+......++ T Consensus 277 ~~~~~~LtGG~dGt~~~~~~~al~ale~~~~~~i~~~t~d~av~~~l~a~vkr~~~~g~~~-~aVlg~~~~~~~~~~~~~ 355 (562) T protein:vir:63 277 NFPLTKLTGGDNGTIPESWADKFSYFANEGGYYLVPLTSKQAVHAEALQFVRDCSYNGNPM-RVFVGGGIGESMEQLFTR 355 (562) T ss_pred cccceeeecCCCCCchhhHHHHHHHHHhCCcEEEEecCCCHHHHHHHHHHHHHHHhCCCcE-EEEecCCCCCCHHHHHHH Confidence 112457899999874332 23334443221110 0000000 00000 0 0000 01111000000 Q ss_pred ----------------c-cccc--cchh-HHHHHHHHH------------------------------HHhhcccc---- Q lcl|Aclame:pro 448 ----------------K-LIGK--YDDF-AYQLALACA------------------------------VMSHYNSV---- 473 (717) Q Consensus 448 ----------------~-~~~~--~~~~-~~~~a~~~~------------------------------~~s~~~~~---- 473 (717) . ..+. .... ....+.|+. ........ T Consensus 356 a~~~n~ervv~v~~~~~~~~~~~~~~~~~~~~~aa~vAGl~A~~~~~~SlT~~~i~~~~v~~~~t~~e~~~li~~Gv~~l 435 (562) T protein:vir:63 356 AIGLQNERAGLIGFSGTVKMDDGRSLKMPGYMFAAQVAGLTCGLEIGEAITFKNIAIETLDTIYEGSQLDQLNESGIITA 435 (562) T ss_pred hhhcCCCcEEEEecCeeEECCCCceeeechhHHHHHHHHHhhcCchhcCccceeeccccccccCCHHHHHHHHhCCeEEE Confidence 0 0000 0000 000111111 00000000 Q ss_pred -----e-eE---Ee-cCC---CcchhhHHHH--HHHHHH----HHhhhhhhhhcccccccccchhhhh-c--cccce--- Q lcl|Aclame:pro 474 -----T-IG---II-PTT---TPSDISLAGV--EEHVKK----LENYANEFYMRDRFGNIIFDADRNK-I--DLGQF--- 528 (717) Q Consensus 474 -----~-i~---ii-~~~---~~~~~~~a~v--~~~~~~----~~~~~~~~~~~d~~~~~~~~~~~~~-~--~~~~~--- 528 (717) + +. ++ ... ...+.....+ ...++. +....+. .......++.... + .+..| T Consensus 436 ~~~~~~~v~~~~iv~~itT~t~~~~~~~~ki~viRv~D~i~~dir~~~~~-----~yiGk~Nn~~~r~~v~~~i~~~L~~ 510 (562) T protein:vir:63 436 EFVRNRAVTNFRIVDDVTTFNDKTDPVKSEIGVGEANDFLVSELKISLDN-----EYIGTKIIDTSASLVKNFVQSFLDR 510 (562) T ss_pred EEecCCcEEEEEeeccceecCCCCCchhhhhhhhHHHHHHHHHHHHHHHh-----cCCccccChHHHHHHHHHHHHHHHH Confidence 0 00 00 000 0111111111 111111 1110000 0001100000000 0 00000 Q ss_pred ----eEEE--eCcEEEEecccCcceeechhHHHHHHHhcCCcccccCC---cee-cccccccccCCH Q lcl|Aclame:pro 529 ----IEVV--AGPDFIVRNTRLGQMASTPDASYIGMVSQLKTQSAPTN---KPL-PSVTALRYTYSA 585 (717) Q Consensus 529 ----~~v~--~p~~~v~~~~~~~~~~~p~ag~vAGl~A~~gv~~SpaN---k~L-~gv~~l~~~lt~ 585 (717) -.+. .+....... .....+ ..+...|.+ +.+ ..... ...++- T Consensus 511 l~~~gaI~~~~~~dv~v~~-~~d~~~-------------v~~~v~pv~~mekIy~ti~~~-~~~~~~ 562 (562) T protein:vir:63 511 KKLAKEIQDYSPEEVQVVI-EGDVAR-------------ISLTVFPIRSMKKIEVSLVYR-QQILTA 562 (562) T ss_pred HHhCCcccCCCccceEEEe-cCCEEE-------------EEEEEEEcccceEEEEEEEEe-eeeecC Confidence 0000 000000000 000000 001111111 000 00000 000000 No 56 >protein:vir:99306 Length: 587 # NCBI annotation: putative major tail sheath protein # Family: family:all:2449 # MgeID: mge:1655 # MgeName: K # Cross-refs: genbank:acc:YP_024479;genbank:gi:48696438;genbank:GeneID:2948034 Probab=99.46 E-value=4.6e-15 Score=99.17 Aligned_cols=542 Identities=11% Similarity=0.048 Sum_probs=188.3 Q ss_pred CCcchhcc----cCCceeEEEecCccccCcCCCCCcceeEEEEEeeccCCcccceec-CHHHHHHhhCCcccccCCcchH Q lcl|Aclame:pro 1 MAGFDQYQ----AIPGHNARFKDGNLNLKSDPNPRETESVVLLGTATDGPVMQPVRV-TPETAYNIFGKVAHENGVYNGA 75 (717) Q Consensus 1 ~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~gp~~~~~~~-~~~~~~~~fg~~~~~~~~~~~~ 75 (717) |+. ++|+ --|||++++.|++. .+.++.+|+.++++|.|++||+++|+++ ++++|+++||. | +-+- T Consensus 1 ~a~-~~~~~~~~~~pgv~~~~~~~~~---~~~~~~~~~~~~~~g~a~~G~~~~~~~~~~~~~~~~~~~~-----g-~l~~ 70 (587) T protein:vir:99 1 MAV-EPFPRRPITRPHASIEVDTSGI---GGSAGSSEKVFCLIGQAEGGEPNTVYELRNYSQAKRLFRS-----G-ELLD 70 (587) T ss_pred Ccc-cccCCcccccCceEEEEecCCc---cccCCCCCceEEEEEEecCCccceeEEeccHHHHHHHhcC-----c-chHH Confidence 765 4454 46999999999999 9999999999999999999999999999 59999999984 1 1112 Q ss_pred HHHHHHHHHHHccCCcEEEEEEecCcceeeeeecccccccccccCCcccceeecCcccceeeccCCcceeeeEEEeecce Q lcl|Aclame:pro 76 TLLPKFEELWAAGNRDIRLMRTTGVNAVSSLLGTSYSKNSKEVAEDKLGGAQARGNVAATFTLPNGGIVEATFLLKARGV 155 (717) Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (717) .+-+||.+++.+|+.+||.||+...++.+ ....+.+-.|..||.|+=.|+. ++ .++. T Consensus 71 ~~~~a~~~~~~~g~~~~~~~rv~~~~~a~------------~~~~~l~~~a~~~G~~gN~i~v-------~~----~~~~ 127 (587) T protein:vir:99 71 AIELAWGSNPNYTAGRILAMRIEDAKPAS------------AEIGGLKITSKIYGNVANNIQV-------GL----EKNT 127 (587) T ss_pred HHHHHhccccCCCceEEEEEEcCCCceeE------------EEecCeEEEEeeccccccceEE-------EE----ccCC Confidence 22344445558999999999997554433 2224455567888888732211 11 1111 Q ss_pred eecCceeEeccccceeeccccccchhheeecCCcccccccceeehhhhhhhhheeee-eeeEeecccccccc---c-Cc- Q lcl|Aclame:pro 156 IIPPNNYTLDVGTEEDMKAGTQPTFAQVLLNENVADMESEITVSYEFTYKDAQGETK-TSEVLDNNTDKDGK---P-MI- 229 (717) Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~-~gelld~~ie~~~~---p-~~- 229 (717) +.++ +-+++.|.-...+ .+|+ -|.++. |...+. + .. T Consensus 128 ~~~~----------------------------------~~~~~~~~~~~~~--~~~~~~g~v~~--i~y~g~~~~a~~~v 169 (587) T protein:vir:99 128 LSDS----------------------------------LRLRVIFQDDRFN--EVYDNIGNIFT--IKYKGEEANATFSV 169 (587) T ss_pred CCcc----------------------------------eeEEEEEecccce--eeeeeccceee--EEeecccccceeeE Confidence 1111 1111111110000 0000 011110 111000 0 00 Q ss_pred ccCCceEEEEEeeccccceeeecCccccccchheeccceeEEEEecCccccceEEEEeecccccccccceEEEeeccccc Q lcl|Aclame:pro 230 AKGADVTIKLEHVALAGLKLYADGIEVVDAKAFTVAGDQLTIHSNSKMKLGASLEAQYAYNLVEVIQPVIELESIFGGGV 309 (717) Q Consensus 230 ~~~ag~i~a~r~~~a~~a~~~~~g~~~~~s~~~g~~an~i~v~l~d~~~t~~~l~v~~a~~~~~~~~d~i~l~a~~~G~~ 309 (717) ...+++..++|..= +.|. -..+.+.|.++.. ..+....+..++...++|+|+|.. T Consensus 170 ~~~~~t~~a~~~~l-------~~g~-----------~~v~~yrL~~g~~-------~~~~~~~~~i~~~~~~tAky~~~~ 224 (587) T protein:vir:99 170 EHDEETQKASRLVL-------KVGD-----------QEVKSYDLTGGAY-------DYTNAIITDINQLPDFEAKLSPFG 224 (587) T ss_pred eecCcceeeeeeee-------ecCC-----------ceeEEEEecCCch-------HHHHHHHhhhccccceeEEeeccC Confidence 00111111211110 1111 1223334433311 011123334445567899999999 Q ss_pred cceEEEEEecCCceEEEEEe--eeccCccce--ee--eee-eec--cccchhHHHHHHHhhcCccceeEEeeeccccccc Q lcl|Aclame:pro 310 YNDIMRKVESKDGAVTVTIT--KPESKRGMI--SE--DPL-VFK--SGDYTNFKMLVDAINNHPFNNVVRARTKPEFEAT 380 (717) Q Consensus 310 GN~i~I~v~~~~~~~t~~lt--~~~~~~~~~--~~--~~~-~l~--~g~~~~~~~lv~~IN~~~~~~~~~a~~~~~~~~~ 380 (717) +|++.+++...-...+++.. ........+ ++ ..+ .+. .+. ......+...+......+. ... +... T Consensus 225 ~~~i~~~~~~~~~~~~v~~~~~~v~a~~~D~~~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~--~~~--~~~~ 299 (587) T protein:vir:99 225 DKNLESSKLDKIENANIKDKAVYVKAVFGDLEKQTAYNGIVSFEQLNAE-GEVPSNVEVEAGEESATVT--ATS--PIKT 299 (587) T ss_pred CceeEeecccccccceeeeeeeeeehhccceeeecccceeeeeeecccc-cchhhhhhhhhccccceee--eec--cccc Confidence 99998776322111111111 000000100 00 011 000 111 1111122222222211111 011 1111 Q ss_pred cccccchhhhhhccCCccCcccch-hhhhhhcccccccccchh---hhh----hhhccccc---cceeE-EeccccCCcc Q lcl|Aclame:pro 381 FTSTLQAAADAKFSGGKDELSLDK-EEMYKRLGGEKNEEGFVT---KQG----AYQYLENY---EVDYV-IPLGVHADTK 448 (717) Q Consensus 381 l~s~~~~~~~~~ltgG~dG~~~~a-~e~~~al~~~~~~~~~v~---~~~----~~~~le~~---~vd~v-i~~~~~a~t~ 448 (717) +. ......|+||.||..... .++++.+...... ..+. .+. +-+..+.. .-..+ +..... T Consensus 300 ~a----~~~~t~LtGG~dG~~~~sy~~al~ale~~~~~-~i~~~t~d~~i~a~l~a~vk~~r~~g~~~~aVlg~~~---- 370 (587) T protein:vir:99 300 IE----PFELTKLKGGTNGEPPATWADKLDKFAHEGGY-YIVPLSSKQSVHAEVASFVKERSDAGEPMRAIVGGGF---- 370 (587) T ss_pred ee----cccceeeecCCCCCccccHHHHHHHHhhCCcE-EEEecCCCHHHHHHHHHHHHHHHhCCCcEEEEecCCC---- Confidence 10 111235899999864321 2344444332111 1000 001 11111100 00011 111111 Q ss_pred cccccchhHHHHHHHHHHHhhcccceeEEecCC---CcchhhHHHH--HHHHHHHHhhhhhhhhcccccccccchhhhhc Q lcl|Aclame:pro 449 LIGKYDDFAYQLALACAVMSHYNSVTIGIIPTT---TPSDISLAGV--EEHVKKLENYANEFYMRDRFGNIIFDADRNKI 523 (717) Q Consensus 449 ~~~~~~~~~~~~a~~~~~~s~~~~~~i~ii~~~---~~~~~~~a~v--~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 523 (717) ..+ ...........+..++..+... ...+...... ..+.-.++.+ ..+... T Consensus 371 ----~~~----~~~~~~~a~~~n~e~vi~v~~~~~~~~~dg~~~~~~~~~~aa~vAGl----------------~Ag~~~ 426 (587) T protein:vir:99 371 ----NES----KEQLFGRQASLSNPRVSLVANSGTFVMDDGRKNHVPAYMVAVALGGL----------------ASGLEI 426 (587) T ss_pred ----CCC----HHHHHHHhhhcCCCcEEEEeccceEecCCCceeeechHHHHHHHHHH----------------HhcCch Confidence 111 1122222233444444332110 0000000000 0000000000 001111 Q ss_pred cccceeEEEeCcEEEEecccCcceeechhHHHHHHHhcCC-cccccCC-----ceecccccccccCCHHHHHHHHhCCcE Q lcl|Aclame:pro 524 DLGQFIEVVAGPDFIVRNTRLGQMASTPDASYIGMVSQLK-TQSAPTN-----KPLPSVTALRYTYSANQLNRLTKARFA 597 (717) Q Consensus 524 ~~~~~~~v~~p~~~v~~~~~~~~~~~p~ag~vAGl~A~~g-v~~SpaN-----k~L~gv~~l~~~lt~~e~d~L~~~GI~ 597 (717) ..+.....+ +...+ ..++ ...=.-..+.++.= +..-+.+ +.++++..... -++.+..++ . T Consensus 427 ~~SlT~~~i-~~~~v------~~~~-t~~e~e~li~~Gvl~l~~~~~~~~~~vriv~~ItT~t~-~~~~~~~~i-----~ 492 (587) T protein:vir:99 427 GESITFKPL-RVSSL------DQIY-ESIDLDELNENGIISIEFVRNRTNTFFRIVDDVTTFND-KSDPVKAEM-----A 492 (587) T ss_pred hcCccceee-ecccc------cccC-CHHHHHHHHhCCeEEEEEecCCcceEEEEeeceeeccC-CCCchhhhh-----h Confidence 111000000 00000 0000 01111111222110 1111111 11222222110 011111111 1 Q ss_pred EEEEEcCceEEEEeceecCCCCccceeeehhhhHHHHHHHHHHHHHHhccccCCHHHHHHHHHHHHHHH-HHHHhCCcee Q lcl|Aclame:pro 598 TFKYKQDGSIGVVDAPTSAHAGSDYTRLSTARIVKEAVNAVREVADPFIGEPNDTGNRNALTAAVDKRL-SKMIENKALL 676 (717) Q Consensus 598 ~ir~~~g~G~~v~g~rTt~s~ds~~~~I~vrR~~d~I~~~I~~~~~~~IgepN~~~~~~~i~~~I~~fL-~~L~~~GaI~ 676 (717) ++|.++. +..+-+.... +.-=.+.+..+....+...|...+.+...+-. |..|= ....- ... T Consensus 493 viRv~D~---i~~di~~~~~-~~yiGk~Nn~~~r~~i~~~i~~~L~~l~~~ga-----------I~~~~~~dv~v--~~~ 555 (587) T protein:vir:99 493 VGEANDF---LVSELKVQLE-DQFIGTRTINTSASIIKDFIQSYLGRKKRDNE-----------IQDFPAEDVQV--IVE 555 (587) T ss_pred hhhhHHH---HHHHHHHHHH-hhCCccccchHHHHHHHHHHHHHHHHHHhCCc-----------ccCCCccceEE--Eec Confidence 1111100 0000000000 00000112233444444555555444331100 11110 00000 011 Q ss_pred cceeeeecChhh-hhCCEEEEEEEEEccccccEEEEEEEEeC Q lcl|Aclame:pro 677 GFDFRLVVTPQQ-ELLGEGSIELSLEAPNELRRLTTIVSLSA 717 (717) Q Consensus 677 G~~~~~~~t~~~-i~~G~l~v~i~v~P~~p~e~I~v~i~~ta 717 (717) +-++.+...-+. ..-.++++.+.+.|- +++| T Consensus 556 ~d~~~v~~~v~Pv~~mekIy~tv~~~~~----------~~~~ 587 (587) T protein:vir:99 556 GNEARISMTVYPIRSFKKISVSLVYKQQ----------TLQA 587 (587) T ss_pred CCEEEEEEEEEEcccceEEEEEEEEEee----------eecC Confidence 112222211111 223578888888762 2223 No 57 >protein:vir:95741 Length: 587 # NCBI annotation: ORF011 # Family: family:all:2449 # MgeID: mge:1577 # MgeName: G1 # Cross-refs: genbank:acc:YP_240910;genbank:gi:66394960;genbank:GeneID:5132682 Probab=99.44 E-value=5.6e-14 Score=93.24 Aligned_cols=545 Identities=10% Similarity=0.026 Sum_probs=187.4 Q ss_pred CCcchhcc----cCCceeEEEecCccccCcCCCCCcceeEEEEEeeccCCcccceec-CHHHHHHhhCCcccccCCcchH Q lcl|Aclame:pro 1 MAGFDQYQ----AIPGHNARFKDGNLNLKSDPNPRETESVVLLGTATDGPVMQPVRV-TPETAYNIFGKVAHENGVYNGA 75 (717) Q Consensus 1 ~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~gp~~~~~~~-~~~~~~~~fg~~~~~~~~~~~~ 75 (717) |+. ++|+ --|||+|++.|++. ...++.+|+.++++|.|++||+++|+++ ++++|+++||.- +-.. T Consensus 1 ~a~-~~~~~~~~~~pgv~~~~~~~~~---~~~~~~~~~~~~~~g~a~~G~~~~~~~~~~~~~~~~~~~~g------~l~~ 70 (587) T protein:vir:95 1 MAV-EPFPRRPITRPHASIEVDTSGI---GGSAGSSEKVFCLIGQAEGGEPNTVYELRNYSQAKRLFRSG------ELLD 70 (587) T ss_pred Ccc-cccCCcccccCceEEEEecCCc---cccCCCCCceEEEEEEeCCCCCceeEEeccHHHHHHHhcCc------chHH Confidence 765 4454 46999999999999 9999999999999999999999999999 599999999851 1122 Q ss_pred HHHHHHHHHHHccCCcEEEEEEecCcceeeeeecccccccccccCCcccceeecCcccceeeccCCcceeeeEEEeecce Q lcl|Aclame:pro 76 TLLPKFEELWAAGNRDIRLMRTTGVNAVSSLLGTSYSKNSKEVAEDKLGGAQARGNVAATFTLPNGGIVEATFLLKARGV 155 (717) Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (717) .+-+||.+++++|+.+||.||+...++.+ ...++.+-.|..||.|+=.|+. ++ .++. T Consensus 71 ~~~~a~~~~~~~g~~~~~~~rv~~~~~a~------------~~~~~l~~~a~~~G~~gN~i~v-------~~----~~~~ 127 (587) T protein:vir:95 71 AIELAWGSNPNYTAGRILAMRIEDAKPAS------------AEIGGLKITSKIYGNVANNIQV-------GL----EKNT 127 (587) T ss_pred HHHHHhccccCCCceEEEEEEcCCCceeE------------EEecCeEEEEecccccccceEE-------EE----ecCC Confidence 23344455558999999999997554433 2223455568888888832221 11 1111 Q ss_pred eecCceeEeccccceeeccccccchhheeecCCcccccccceeehhhhhhhhheeeeeeeEeecccccccccCc-ccCCc Q lcl|Aclame:pro 156 IIPPNNYTLDVGTEEDMKAGTQPTFAQVLLNENVADMESEITVSYEFTYKDAQGETKTSEVLDNNTDKDGKPMI-AKGAD 234 (717) Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~gelld~~ie~~~~p~~-~~~ag 234 (717) +.+.-.+++-.. .++....|-++ |.-+.++|.= +.++.-.. ...++ T Consensus 128 ~~~~~~~~~~~~-----~~~~~~~~~~~---------g~v~si~y~g-------------------~~~~~~~~v~~~~~ 174 (587) T protein:vir:95 128 LSDSLRLRVIFQ-----DDRFNEVYDNI---------GNIFTIKYKG-------------------EEANATFSVEHDEE 174 (587) T ss_pred CCCceeEEEEEe-----cccceeeeeec---------cceeeeeeec-------------------cccccceeeeeccc Confidence 111111111000 00000000000 0111111100 00000000 00111 Q ss_pred eEEEEEeeccccceeeecCccccccchheeccceeEEEEecCccccceEEEEeecccccccccceEEEeeccccccceEE Q lcl|Aclame:pro 235 VTIKLEHVALAGLKLYADGIEVVDAKAFTVAGDQLTIHSNSKMKLGASLEAQYAYNLVEVIQPVIELESIFGGGVYNDIM 314 (717) Q Consensus 235 ~i~a~r~~~a~~a~~~~~g~~~~~s~~~g~~an~i~v~l~d~~~t~~~l~v~~a~~~~~~~~d~i~l~a~~~G~~GN~i~ 314 (717) +..++|..= +.|. -..+.+.|.++.. ..+....+..+....++|+|+|..+|+++ T Consensus 175 t~~a~~~~l-------~~g~-----------~~v~~yrL~~g~~-------~~~~~~~~~in~~~~~tAky~g~~~~~i~ 229 (587) T protein:vir:95 175 TQKASRLVL-------KVGD-----------QEVKSYDLTGGAY-------DYTNAIITDINQLPDFEAKLSPFGDKNLE 229 (587) T ss_pred ceeeeeeee-------ecCC-----------ceEEEEEecCCch-------HHHHHHHHhhccccceEEEEecccCceeE Confidence 112211111 1111 1123334433311 11112233344556789999999999998 Q ss_pred EEEecCCceEEEEEeeec--cCccce--ee--eeeeeccccch--hHHHHHHHhhcCccceeEEeeeccccccccccccc Q lcl|Aclame:pro 315 RKVESKDGAVTVTITKPE--SKRGMI--SE--DPLVFKSGDYT--NFKMLVDAINNHPFNNVVRARTKPEFEATFTSTLQ 386 (717) Q Consensus 315 I~v~~~~~~~t~~lt~~~--~~~~~~--~~--~~~~l~~g~~~--~~~~lv~~IN~~~~~~~~~a~~~~~~~~~l~s~~~ 386 (717) +++...-...+++..... ....++ .+ ..++....... ..-..+..++......+ . ...+...+. T Consensus 230 ~~~~~~~~~~~v~~~~~~v~a~~~d~~~~~~~~~~v~~~~~~g~~~~~~~~~~~~~~~~a~~--~--~~~~~~~~a---- 301 (587) T protein:vir:95 230 SSKLDKIENANIKDKAVYVKAVFGDLEKQTAYNGIVSFEQLNAEGEVPSNVEVEAGEESATV--T--ATSPIKTIE---- 301 (587) T ss_pred EeecCcccccceehhhhhhhhhhcceeeeeeceeeeeeecccccceeccchhhhhcccchhe--e--cccccccee---- Confidence 876333222221111000 000110 00 00110000000 00011112222111110 0 001111110 Q ss_pred hhhhhhccCCccCcccch-hhhhhhcccccccccchh--hhh----hhhccccc---ccee-EEeccccCCcccccccch Q lcl|Aclame:pro 387 AAADAKFSGGKDELSLDK-EEMYKRLGGEKNEEGFVT--KQG----AYQYLENY---EVDY-VIPLGVHADTKLIGKYDD 455 (717) Q Consensus 387 ~~~~~~ltgG~dG~~~~a-~e~~~al~~~~~~~~~v~--~~~----~~~~le~~---~vd~-vi~~~~~a~t~~~~~~~~ 455 (717) ......|+||.||..... .++++++......--... .+. +-+..+.. .-.. .+...... .+ T Consensus 302 ~~~~t~LtGG~dG~~~~~y~~~l~ale~~~~~~i~~~t~d~~v~a~l~a~vk~~~~~g~~~~aVvg~~~~--------~~ 373 (587) T protein:vir:95 302 PFELTKLKGGTNGEPPATWADKLDKFAHEGGYYIVPLSSKQSVHAEVASFVKERSDAGEPMRAIVGGGFN--------ES 373 (587) T ss_pred ccceeeeecCCCCCCcccHHHHHHHHHhCCcEEEEecCCCHHHHHHHHHHHHHHHhCCCcEEEEEcCCCC--------CC Confidence 011235899999964321 234444433211110000 001 11111100 0001 11111111 11 Q ss_pred hHHHHHHHHHHHhhcccceeEEecCCC---cchh---h--HHHHHHHHHHHHhhhhhhhhcccccccccchhhhhccccc Q lcl|Aclame:pro 456 FAYQLALACAVMSHYNSVTIGIIPTTT---PSDI---S--LAGVEEHVKKLENYANEFYMRDRFGNIIFDADRNKIDLGQ 527 (717) Q Consensus 456 ~~~~~a~~~~~~s~~~~~~i~ii~~~~---~~~~---~--~a~v~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 527 (717) .+.........+..++..+.... ..+. . ......+ ++.+ ..+.....+. T Consensus 374 ----~~~~~~~a~~~n~ervi~v~~~~~~~~~dg~~~~~~~~~~aa~---vAGl----------------~Ag~~~~~Sl 430 (587) T protein:vir:95 374 ----KEQLFGRQESLSNPRVSLVANSGTFVMDDGRKNHVPAYMVAVA---LGGL----------------ASGLEIGESI 430 (587) T ss_pred ----HHHHHHHHhhcCCCcEEEecccceEecCCCceeeechHHHHHH---HHHH----------------HhcCchhcCc Confidence 12222223334455544331110 0000 0 0000000 0000 0011111010 Q ss_pred eeEEEeCcEEEEecccCcceeechhHHHHHHHhcCC-cccccCC-----ceecccccccccCCHHHHHHHHhCCcEEEEE Q lcl|Aclame:pro 528 FIEVVAGPDFIVRNTRLGQMASTPDASYIGMVSQLK-TQSAPTN-----KPLPSVTALRYTYSANQLNRLTKARFATFKY 601 (717) Q Consensus 528 ~~~v~~p~~~v~~~~~~~~~~~p~ag~vAGl~A~~g-v~~SpaN-----k~L~gv~~l~~~lt~~e~d~L~~~GI~~ir~ 601 (717) ....+ +...+ ..++ .-.=.-..+.++.= ...-+.+ +.++++..... -++.+...+ .++|. T Consensus 431 T~~~i-~~~~v------~~~~-t~~e~e~ai~~Gvl~l~~~~~~~~~~vriv~~itT~t~-~~d~~~~~i-----~viRv 496 (587) T protein:vir:95 431 TFKPL-RVSSL------DQIY-ESIDLDELNENGIISIEFVRNRTNTFFRIVDDVTTFND-KSDPVKAEM-----AVGEA 496 (587) T ss_pred cceee-ecccc------cccC-CHHHHHHHHhCCeEEEEEecCCcceEEEEeecceeccC-CCCcchhhh-----hhhhh Confidence 00000 00000 0000 00011111111110 1111111 11122221110 011111111 11111 Q ss_pred EcCceEEEEece-ecCCCCccceeeehhhhHHHHHHHHHHHHHHhccccCCHHHHHHHHHHHHHHH-HHHHhCCceecce Q lcl|Aclame:pro 602 KQDGSIGVVDAP-TSAHAGSDYTRLSTARIVKEAVNAVREVADPFIGEPNDTGNRNALTAAVDKRL-SKMIENKALLGFD 679 (717) Q Consensus 602 ~~g~G~~v~g~r-Tt~s~ds~~~~I~vrR~~d~I~~~I~~~~~~~IgepN~~~~~~~i~~~I~~fL-~~L~~~GaI~G~~ 679 (717) ++. +..+. -... +.-=.+.+..+....+...|...+++...+- .|..|= ..+.- .+.+-+ T Consensus 497 ~D~----i~~dir~~~~-~~~iGk~nn~~~r~~v~~~i~~~L~~l~~~g-----------aI~~~~~~dv~v--~~~~d~ 558 (587) T protein:vir:95 497 NDF----LVSELKVQLE-DQFIGTRTINTSASIIKDFIQSYLGRKKRDN-----------EIQDFPAEDVQV--IVEGNE 558 (587) T ss_pred HHH----HHHHHHHHHH-hhCCccccchHHHHHHHHHHHHHHHHHHhCC-----------cccCCCccceEE--EecCCE Confidence 100 00000 0000 0000011223344444444544444332110 011110 00000 011212 Q ss_pred eeeecChhhh-hCCEEEEEEEEEccccccEEEEEEEEeC Q lcl|Aclame:pro 680 FRLVVTPQQE-LLGEGSIELSLEAPNELRRLTTIVSLSA 717 (717) Q Consensus 680 ~~~~~t~~~i-~~G~l~v~i~v~P~~p~e~I~v~i~~ta 717 (717) +.+...-+.. .-.++++.+.++|- +++| T Consensus 559 ~~v~~~v~Pv~~mekI~vt~~~~~~----------~~~~ 587 (587) T protein:vir:95 559 ARISMTVYPIRSFKKISVSLVYKQQ----------TLQA 587 (587) T ss_pred EEEEEEEEEcccceEEEEEEEEeee----------eecC Confidence 2222111222 23578888888762 2222 No 58 >protein:vir:3788 Length: 376 # NCBI annotation: tail sheath # Family: family:all:669 # MgeID: mge:328 # MgeName: HP2 # Cross-refs: genbank:acc:NP_536828;genbank:gi:17981837;genbank:GeneID:929216 Probab=99.44 E-value=5.1e-14 Score=93.44 Aligned_cols=341 Identities=15% Similarity=0.128 Sum_probs=159.2 Q ss_pred cccceEEEEEecCCceEEEEEeeeccCccceee-eeeeeccccc-hhHHHHHHHhhcCccceeEEeeecccccccccccc Q lcl|Aclame:pro 308 GVYNDIMRKVESKDGAVTVTITKPESKRGMISE-DPLVFKSGDY-TNFKMLVDAINNHPFNNVVRARTKPEFEATFTSTL 385 (717) Q Consensus 308 ~~GN~i~I~v~~~~~~~t~~lt~~~~~~~~~~~-~~~~l~~g~~-~~~~~lv~~IN~~~~~~~~~a~~~~~~~~~l~s~~ 385 (717) .||. | ++...-+.|+.+.+ .-+.|-.|.- .+...+ ..+|..++.-. ...+.+..|.+.. T Consensus 1 ~~~~---v-----------~vn~~n~~~g~~~~~er~~Lfig~~~~~~~~~-~~~~~~sdld~----~lg~~~~~lk~~v 61 (376) T protein:vir:37 1 MFPS---V-----------QINALNQLSGETKEIERHALFVGVGTTNQGKL-LALTPDSDFDK----VFGETDTDLKKQV 61 (376) T ss_pred CCCe---E-----------EEecccccCCCcccccceEEeeccccccccce-eeecCccchHh----hhCCCchHHHHHH Confidence 3433 2 22222222222111 1111111110 111111 12232222100 0011111111111 Q ss_pred chhhhhhccCCccCcccchhhhhhhcccccccccchhhhhhh-hccccccceeEEeccccCCcccccccchhHHHHHH-H Q lcl|Aclame:pro 386 QAAADAKFSGGKDELSLDKEEMYKRLGGEKNEEGFVTKQGAY-QYLENYEVDYVIPLGVHADTKLIGKYDDFAYQLAL-A 463 (717) Q Consensus 386 ~~~~~~~ltgG~dG~~~~a~e~~~al~~~~~~~~~v~~~~~~-~~le~~~vd~vi~~~~~a~t~~~~~~~~~~~~~a~-~ 463 (717) ...++.+|++=+.... . +.. ...+. ..+. ...+.+.|-.+..+......+ ..+ .+... . T Consensus 62 ---~aa~~naG~~~~~~~~---~--~~~---~~~~~--~~Av~~a~~~~s~E~V~v~~pv~t~~-----a~i-~aa~~~a 122 (376) T protein:vir:37 62 ---RAAMLNAGQNWFAHVY---I--AQE---DGYDF--VECVKKANQTASFEYCVNTRYLGVDK-----ASI-GKLQECY 122 (376) T ss_pred ---HHHHhCCCCcEEEEEE---e--ecC---CchHH--HHHHHHhhhhcCceEEEEeccccccH-----HHH-HHHHHHH Confidence 0112333332110000 0 000 00000 0000 001222333332222110000 000 11111 0 Q ss_pred HHHHhhcccceeEEecCCCcc--hhhHHHHHHHHHHHHhhhhhhhhcccccccccchhhhhccccceeEEEeCcEEEEec Q lcl|Aclame:pro 464 CAVMSHYNSVTIGIIPTTTPS--DISLAGVEEHVKKLENYANEFYMRDRFGNIIFDADRNKIDLGQFIEVVAGPDFIVRN 541 (717) Q Consensus 464 ~~~~s~~~~~~i~ii~~~~~~--~~~~a~v~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~v~~p~~~v~~~ 541 (717) ......+.+....++...... ........+|...+..+..- + .+.++.++- T Consensus 123 ~el~~~~~Rpv~file~r~~~~~~~~~e~w~~y~~~~~al~~g------------------i-a~~~V~~V~-------- 175 (376) T protein:vir:37 123 AELLAKFGRRTFFIQAVQGINHDQSDGETWDQYVQKLTTLQQT------------------I-VADHVCLVP-------- 175 (376) T ss_pred HHHHHhcCCeEEEEEeccCcCcccccccCHHHHHHHHHHhhcc------------------c-ccccceeee-------- Confidence 111222233443333222111 00011122222211111000 0 001111110 Q ss_pred ccCcceeechhHHHHHHHhc--CCcccccCCce---eccccccc-------ccCCHHHHHHHHhCCcEEEEEEcCc-eEE Q lcl|Aclame:pro 542 TRLGQMASTPDASYIGMVSQ--LKTQSAPTNKP---LPSVTALR-------YTYSANQLNRLTKARFATFKYKQDG-SIG 608 (717) Q Consensus 542 ~~~~~~~~p~ag~vAGl~A~--~gv~~SpaNk~---L~gv~~l~-------~~lt~~e~d~L~~~GI~~ir~~~g~-G~~ 608 (717) ..+....|.+||.+|. ..++.||..+. |.|...++ ..++...++.|.++|+.+.+.++|+ |++ T Consensus 176 ----~~~gn~~G~~aGRl~~aaVsVadspgRV~tG~l~gl~~~~lp~d~~~~~l~~a~l~aLd~agy~vp~~Y~gy~G~Y 251 (376) T protein:vir:37 176 ----LLFGNETGVLAGRLANRAVTVADSPARVQTGALVSLGSANKPLDKDRNELTLAHLKSLETARYSVPMWYPDYDGYY 251 (376) T ss_pred ----eehhhhHHHHHHHHhhcccchhhCccceeccccccccccccccCcCcccCCHHHHHHHHhCCCeEEEeeCCCCceE Confidence 0112347889998864 46789998764 33332222 2478999999999999999999987 999 Q ss_pred EEeceecCCCCccceeeehhhhHHHHHHHHHHHHHHhcccc--CC-HHHHHHHHHHHHHHHHHHHhCCceeccee--eee Q lcl|Aclame:pro 609 VVDAPTSAHAGSDYTRLSTARIVKEAVNAVREVADPFIGEP--ND-TGNRNALTAAVDKRLSKMIENKALLGFDF--RLV 683 (717) Q Consensus 609 v~g~rTt~s~ds~~~~I~vrR~~d~I~~~I~~~~~~~Igep--N~-~~~~~~i~~~I~~fL~~L~~~GaI~G~~~--~~~ 683 (717) +-+++|++...+||++|..+|++|++.+.+|..+-.+|... |+ +......+.-+..-|++|.+...|.|..+ ++. T Consensus 252 ~~d~~tl~~~gsDY~~ie~~RVvdKa~R~vR~~ai~~i~D~~lnst~~sia~~~~yi~~pLr~M~~s~~i~g~~fpGeI~ 331 (376) T protein:vir:37 252 WADGRTLDVEGGDYQVIENLRVVDKVARKVRLLAIGKIADRSFNSTTSSTEYHKNYFAKPLRDMSKSATINGKDFPGECM 331 (376) T ss_pred EeCceEeccCCCChhhhhhhhHHHHHHHHHHHHHHHHhCCcccCcchhhHHHHHHHHHHHHHHHHhcchhccccccceee Confidence 99999999889999999999999999999998877777552 33 23344566667788999999999988643 332 Q ss_pred cCh------hhhhCCEEEEEEEEEccccccEEEEEEEEeC Q lcl|Aclame:pro 684 VTP------QQELLGEGSIELSLEAPNELRRLTTIVSLSA 717 (717) Q Consensus 684 ~t~------~~i~~G~l~v~i~v~P~~p~e~I~v~i~~ta 717 (717) ... ......++.|.+.+.|.....+|++.|-+.- T Consensus 332 ~p~d~Di~i~w~s~~~V~I~~~v~P~~~pk~Itv~I~Ldl 371 (376) T protein:vir:37 332 PPKDDAITIVWQSKTKVTIYIKVRPYDCPKEITANIFLDL 371 (376) T ss_pred cCCCCCceEEeeccceEEEEEEEEeccCCceEEEEEEeec Confidence 222 2235677888889999999999998877766 No 59 >protein:vir:3751 Length: 376 # NCBI annotation: orf23 # Family: family:all:669 # MgeID: mge:79 # MgeName: HP1 # Cross-refs: genbank:acc:NP_043492;genbank:gi:9628627;genbank:GeneID:1261129 Probab=99.42 E-value=1.1e-13 Score=91.55 Aligned_cols=342 Identities=15% Similarity=0.126 Sum_probs=162.5 Q ss_pred cccceEEEEEecCCceEEEEEeeeccCccceeee-eeee--ccccchhHHHHHHHhhcCccceeEEeeeccccccccccc Q lcl|Aclame:pro 308 GVYNDIMRKVESKDGAVTVTITKPESKRGMISED-PLVF--KSGDYTNFKMLVDAINNHPFNNVVRARTKPEFEATFTST 384 (717) Q Consensus 308 ~~GN~i~I~v~~~~~~~t~~lt~~~~~~~~~~~~-~~~l--~~g~~~~~~~lv~~IN~~~~~~~~~a~~~~~~~~~l~s~ 384 (717) .||. +++...-+.|+.+.+- -+.| +.+. .+.. -+..+|..++.-. ...+.+..|.+. T Consensus 1 ~~~~--------------v~vn~ln~~qg~~~~ver~~lfig~~~-~~~~-~~~~~~~~sdld~----~lg~~ds~lk~~ 60 (376) T protein:vir:37 1 MFPS--------------VQINALNQLSGETKEIERHALFVGVGT-TNQG-KLLALTPDSDFDK----VFGETDTDLKKQ 60 (376) T ss_pred CCCe--------------EEEeeeeccCCCcccccceEEEeeccc-cccC-ceEEecCCCChHH----hhCCCchhHHHH Confidence 3432 2222222222221111 1111 1111 0000 0111222211100 001111111111 Q ss_pred cchhhhhhccCCccCcccchhhhhhhcccccccccchhhhhhhhccccccceeEEeccccCCcccccccchhHHHHHHHH Q lcl|Aclame:pro 385 LQAAADAKFSGGKDELSLDKEEMYKRLGGEKNEEGFVTKQGAYQYLENYEVDYVIPLGVHADTKLIGKYDDFAYQLALAC 464 (717) Q Consensus 385 ~~~~~~~~ltgG~dG~~~~a~e~~~al~~~~~~~~~v~~~~~~~~le~~~vd~vi~~~~~a~t~~~~~~~~~~~~~a~~~ 464 (717) ..+ .++-+|++=+.... ....++ .+.. ..+-...+.+.|-.|..++..+... ..+...-+... T Consensus 61 v~a---a~~naG~~w~a~~~---~p~~~~-----~~~~-~Av~~a~~~~s~E~V~v~~p~~t~~-----a~i~a~qa~a~ 123 (376) T protein:vir:37 61 VRA---AMLNAGQNWFAHVY---IAQEDG-----YDFV-ECVKKANQTASFEYCVNTRYLGVDK-----ASIGKLQECYA 123 (376) T ss_pred HHH---HHhCCCCceEEEEE---ecCCCh-----hhHH-HHHHHHHhhCCeeEEEEecCcchhH-----HHHHHHHHHHH Confidence 111 11222221100000 000000 0000 0000001223333333322110000 00000000111 Q ss_pred HHHhhcccceeEEecCCCcch--hhHHHHHHHHHHHHhhhhhhhhcccccccccchhhhhccccceeEEEeCcEEEEecc Q lcl|Aclame:pro 465 AVMSHYNSVTIGIIPTTTPSD--ISLAGVEEHVKKLENYANEFYMRDRFGNIIFDADRNKIDLGQFIEVVAGPDFIVRNT 542 (717) Q Consensus 465 ~~~s~~~~~~i~ii~~~~~~~--~~~a~v~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~v~~p~~~v~~~~ 542 (717) ..+..+.+....++....... .......+|+..+..+..- ..+.++.++-. T Consensus 124 el~~~~~R~vffile~~g~d~~~~~ge~w~~y~~~l~a~~~g-------------------ia~~~V~vV~~-------- 176 (376) T protein:vir:37 124 ELLAKFGRRTFFIQAVQGINHDQSDGETWDQYVQKLTTLQQT-------------------IVADHVCLVPL-------- 176 (376) T ss_pred HHHHhcCCeEEEEEeccCCCCcccccCCHHHHHHHHHHHhcc-------------------ccccceeeeee-------- Confidence 222223344444443221110 0011122222222111100 00112222211 Q ss_pred cCcceeechhHHHHHHHhcC--CcccccCCceecccccc---c-------ccCCHHHHHHHHhCCcEEEEEEcCc-eEEE Q lcl|Aclame:pro 543 RLGQMASTPDASYIGMVSQL--KTQSAPTNKPLPSVTAL---R-------YTYSANQLNRLTKARFATFKYKQDG-SIGV 609 (717) Q Consensus 543 ~~~~~~~p~ag~vAGl~A~~--gv~~SpaNk~L~gv~~l---~-------~~lt~~e~d~L~~~GI~~ir~~~g~-G~~v 609 (717) .+....|.+||.++.+ .++.||..+.--.+.++ . ..++.+.++.|.++|+.+.+.++|. |+++ T Consensus 177 ----~~gn~~G~~aGRl~naaVsVadspgRV~tGai~gl~~~~~p~d~~g~el~~a~l~aLd~arysvpr~Y~gydG~Yw 252 (376) T protein:vir:37 177 ----LFGNETGVLAGRLANRAVTVADSPARVQTGALVSLGSANKPLDKDGNELTLAHLKSLETARYSVPMWYPDYDGYYR 252 (376) T ss_pred ----eccchHHHHHHHHHhCCcchhcCccceeecccccccccccccccCCcccchHHHHHHHhCCCeEEEeeCCCCceEE Confidence 1113478899998654 66999998753333332 1 2467889999999999999999986 9999 Q ss_pred EeceecCCCCccceeeehhhhHHHHHHHHHHHHHHhcccc--C-CHHHHHHHHHHHHHHHHHHHhCCceeccee--eeec Q lcl|Aclame:pro 610 VDAPTSAHAGSDYTRLSTARIVKEAVNAVREVADPFIGEP--N-DTGNRNALTAAVDKRLSKMIENKALLGFDF--RLVV 684 (717) Q Consensus 610 ~g~rTt~s~ds~~~~I~vrR~~d~I~~~I~~~~~~~Igep--N-~~~~~~~i~~~I~~fL~~L~~~GaI~G~~~--~~~~ 684 (717) -+++|++...+||++|..+|++|++.+.+|...-..|+.+ | ++......+..+..-|++|.+.+.|.|..+ ++.. T Consensus 253 ~dg~tl~~~gsDYq~ie~~RVvdKa~R~vR~~Ai~~i~Dr~lnstp~sia~~~~~~~~pLr~M~ks~ei~g~~fpgei~~ 332 (376) T protein:vir:37 253 ADGRTLDVEGGDYQVIENLRVVDKVARKVRLLAIGKIADRSFNSTTSSTEYHKNYFAKPLRDMSKSATINGKDFPGECMP 332 (376) T ss_pred eCCeEeccCCCCeeeehhchHHHHHHHHHHHHHHHHhcCccccCChhHHHHHHHHHhHHHHHHHhhhhhccccccceeec Confidence 9999999999999999999999999999998777777664 3 455667778888899999999999999753 3332 Q ss_pred Chhh-h-----hCCEEEEEEEEEccccccEEEEEEEEeC Q lcl|Aclame:pro 685 TPQQ-E-----LLGEGSIELSLEAPNELRRLTTIVSLSA 717 (717) Q Consensus 685 t~~~-i-----~~G~l~v~i~v~P~~p~e~I~v~i~~ta 717 (717) .+++ + .+.++.|-+.++|..--..|++.|-+-- T Consensus 333 P~d~dI~i~w~sk~~V~I~~~vrPy~cpk~i~~~I~LDl 371 (376) T protein:vir:37 333 PKDDAITIVWQSKTKVTIYIKVRPYDCPKEITANIFLDL 371 (376) T ss_pred CCCCceEEEeccCceEEEEEEEeeecCcceeEEEEEEec Confidence 2221 2 2456888888889988899999888876 No 60 >protein:vir:78782 Length: 370 # NCBI annotation: putative tail sheath protein # Family: family:all:669 # MgeID: mge:1857 # MgeName: phiO18P # Cross-refs: genbank:acc:YP_001285652;genbank:gi:148727158;genbank:GeneID:5220132 Probab=99.31 E-value=6.1e-13 Score=87.54 Aligned_cols=336 Identities=15% Similarity=0.096 Sum_probs=151.9 Q ss_pred cccceEEEEEecCCceEEEEEeeeccCccceeee-eeee--ccccchhHHHHHHHhhcCccceeEEeeeccccccccccc Q lcl|Aclame:pro 308 GVYNDIMRKVESKDGAVTVTITKPESKRGMISED-PLVF--KSGDYTNFKMLVDAINNHPFNNVVRARTKPEFEATFTST 384 (717) Q Consensus 308 ~~GN~i~I~v~~~~~~~t~~lt~~~~~~~~~~~~-~~~l--~~g~~~~~~~lv~~IN~~~~~~~~~a~~~~~~~~~l~s~ 384 (717) .|+. +++...-..|+.+.+. -+.| +.+. .+...+ ..+|..++.-.. ..+.+..|.+. T Consensus 1 ~~~~--------------v~vn~~n~~~g~~~~~er~~lfig~~~-~~~g~~-~~~~~~sdld~~----l~~~ds~lk~~ 60 (370) T protein:vir:78 1 MWPY--------------VQIYNLNQMQGPVTEVERHLLFIGSAA-SNTGKL-LSLNAQSDFDQL----LGAADSELKAN 60 (370) T ss_pred CCce--------------EEEeeccccCCCcCccceeEEEEeccc-ccccce-EeecCccCHHHh----cCCcChhHHHH Confidence 3332 2222222222211111 0111 1111 111111 122222221000 01111111111 Q ss_pred cchhhhhhccCCccCcccchhhhhhhcccccccccchhhhhhh-hccccccceeEEeccccCCcccccccchhHHHHHH- Q lcl|Aclame:pro 385 LQAAADAKFSGGKDELSLDKEEMYKRLGGEKNEEGFVTKQGAY-QYLENYEVDYVIPLGVHADTKLIGKYDDFAYQLAL- 462 (717) Q Consensus 385 ~~~~~~~~ltgG~dG~~~~a~e~~~al~~~~~~~~~v~~~~~~-~~le~~~vd~vi~~~~~a~t~~~~~~~~~~~~~a~- 462 (717) .. ..++.+|++=.-... .. ....+. ..+. ...+.+.|..|..++...+.. .+ ..... T Consensus 61 v~---aa~~naG~~~~~~~~----p~-----~~~~d~--~~Av~~a~~~~s~E~V~v~~~~s~~a------~~-~a~~~~ 119 (370) T protein:vir:78 61 LL---AARDNAGQNWSAAAY----VL-----PTDKPW--LDAARDAQQTQSFEGVVVLGQEWHQA------AI-NAAHAL 119 (370) T ss_pred HH---HHHhCCCCceEEEEE----Ee-----cCchhH--HHHHHHHHhhCCccEEEEecCcchHH------HH-HHHHHH Confidence 10 112222221100000 00 000000 0000 001122233333222111100 00 00100 Q ss_pred HHHHHhhcccceeEEecCCCcchhhHHHHHHHHHHHHhhhhhhhhcccccccccchhhhhccccceeEEEeCcEEEEecc Q lcl|Aclame:pro 463 ACAVMSHYNSVTIGIIPTTTPSDISLAGVEEHVKKLENYANEFYMRDRFGNIIFDADRNKIDLGQFIEVVAGPDFIVRNT 542 (717) Q Consensus 463 ~~~~~s~~~~~~i~ii~~~~~~~~~~a~v~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~v~~p~~~v~~~~ 542 (717) .......+.+....++....+.+. ....+|...+..+..- ..+.++.++-.++ T Consensus 120 a~el~n~~~Rpv~file~~~~~~~--e~w~~y~~~l~al~~g-------------------ia~~~V~vvp~~~------ 172 (370) T protein:vir:78 120 NQELIAKWGRWQFMLLAVPAIADE--QDWATYEAELATLQDG-------------------IAASSVSLIPQLW------ 172 (370) T ss_pred HHHHHHhcCCeEEEEEeecCCCCc--CCHHHHHHHHHHhhhc-------------------cccccceEEeeec------ Confidence 011122223344333332222211 1122222221111100 0012233322111 Q ss_pred cCcceeechhHHHHHHHhcC--CcccccCCce---ecccc-----cccccCCHHHHHHHHhCCcEEEEEEcCc-eEEEEe Q lcl|Aclame:pro 543 RLGQMASTPDASYIGMVSQL--KTQSAPTNKP---LPSVT-----ALRYTYSANQLNRLTKARFATFKYKQDG-SIGVVD 611 (717) Q Consensus 543 ~~~~~~~p~ag~vAGl~A~~--gv~~SpaNk~---L~gv~-----~l~~~lt~~e~d~L~~~GI~~ir~~~g~-G~~v~g 611 (717) ....|.+||..+.+ .+..+|..+. +.|.. +....++.+.++.|.++|+.+++.++|. |+++-+ T Consensus 173 ------g~~~G~~aGRL~naavsVadsP~Rv~tG~l~gl~~~p~d~~~~~l~~a~l~aLd~agy~vp~~Y~gy~G~Y~~d 246 (370) T protein:vir:78 173 ------PTLAGAYAGRLCNRAVSIADSPCRVKTGALVGLGNKPVGKDGIPLPLATLQTLEANRYSVPMWYPDYDGIYWAD 246 (370) T ss_pred ------cccHHHHHHHHhcCeeeecccceeeeccccccccccccccCCcccCHHHHHHHHhCCCeEEEeeCCCCceEEeC Confidence 11247788876543 4678887543 22322 2233578899999999999999999987 999999 Q ss_pred ceecCCCCccceeeehhhhHHHHHHHHHHHHHHhccc--cCCHH-HHHHHHHHHHHHHHHHHhCCceecce--eeeec-- Q lcl|Aclame:pro 612 APTSAHAGSDYTRLSTARIVKEAVNAVREVADPFIGE--PNDTG-NRNALTAAVDKRLSKMIENKALLGFD--FRLVV-- 684 (717) Q Consensus 612 ~rTt~s~ds~~~~I~vrR~~d~I~~~I~~~~~~~Ige--pN~~~-~~~~i~~~I~~fL~~L~~~GaI~G~~--~~~~~-- 684 (717) ++||+...+||++|..+|++|++.+.+|..+...|.. .|+.. .....+.....-|++|.+.+.|.+-. -++.. T Consensus 247 ~~tl~~~gsDYq~ie~~RVvdKa~R~vR~~ai~~i~D~~lnst~gsia~~~~~~~~~L~ema~s~~i~~~~fpgeI~~p~ 326 (370) T protein:vir:78 247 GRTLDAEGGDYQVIENLRIAYKVARRMRLRAIARIGDRSFNSTPGSTAAAITYFGKDLREMAKSTTINGQPFPGDIASPQ 326 (370) T ss_pred ceEeccCCCChhhhhhhhHHHHHHHHHHHHHHHHhCCcccCCCCcchhHHHHHHHhhHHHHHhhhhhcccccceeEeccC Confidence 9999988999999999999999999999766555543 23322 22333344445577888888888733 23322 Q ss_pred ----ChhhhhCCEEEEEEEEEccccccEEEEEEEEeC Q lcl|Aclame:pro 685 ----TPQQELLGEGSIELSLEAPNELRRLTTIVSLSA 717 (717) Q Consensus 685 ----t~~~i~~G~l~v~i~v~P~~p~e~I~v~i~~ta 717 (717) +.......++.|.+.+.|.....+|++.|.+.. T Consensus 327 d~Di~i~w~s~~~v~I~~~v~P~~~pk~Itv~I~LDl 363 (370) T protein:vir:78 327 DGDIRIQWVAKNLVSVFVVVRTVDCPKGITVNIMLDL 363 (370) T ss_pred CCcceEEeeccceEEEEEEEEeccCCceEEEEEEEee Confidence 222235677899999999999999999998887 No 61 >protein:vir:276 Length: 369 # NCBI annotation: putative tail sheath protein # Family: family:all:669 # MgeID: mge:7 # MgeName: K139 # Cross-refs: genbank:acc:NP_536656;genbank:gi:17975134;genbank:GeneID:929090 Probab=99.30 E-value=5e-12 Score=82.56 Aligned_cols=339 Identities=15% Similarity=0.069 Sum_probs=156.6 Q ss_pred ccccceEEEEEecCCceEEEEEeeeccCccceee-eeeee--ccccc-hhHHHHHHHhhcCccceeEEeeeccccccccc Q lcl|Aclame:pro 307 GGVYNDIMRKVESKDGAVTVTITKPESKRGMISE-DPLVF--KSGDY-TNFKMLVDAINNHPFNNVVRARTKPEFEATFT 382 (717) Q Consensus 307 G~~GN~i~I~v~~~~~~~t~~lt~~~~~~~~~~~-~~~~l--~~g~~-~~~~~lv~~IN~~~~~~~~~a~~~~~~~~~l~ 382 (717) =.||+ +++...-+.|+.+.+ .-+.| +.|.- .+.+. +..+|..++.-.. ..+.+..|. T Consensus 1 m~~~~--------------V~in~~n~~qg~~~~ver~~lfig~g~~~~~~g~-~~~~~~~sdld~~----lg~~ds~lk 61 (369) T protein:vir:27 1 MAWPT--------------VIIKILNLMNGPIADIECHFLFVIRGTVSGEVRN-LIMVDSTSDLDDV----LAEASAEGL 61 (369) T ss_pred CCCCc--------------eEEecccccCCCcccccceEEEEEeccccccccc-eEEecCccchHhh----cCCcChhHH Confidence 12222 233222223332222 11111 11210 01111 1122222221000 011111111 Q ss_pred cccchhhhhhccCCccCcccchhhhhhhcccccccccchhhhhhh-hccccccceeEEeccccCCcccccccchhHHHHH Q lcl|Aclame:pro 383 STLQAAADAKFSGGKDELSLDKEEMYKRLGGEKNEEGFVTKQGAY-QYLENYEVDYVIPLGVHADTKLIGKYDDFAYQLA 461 (717) Q Consensus 383 s~~~~~~~~~ltgG~dG~~~~a~e~~~al~~~~~~~~~v~~~~~~-~~le~~~vd~vi~~~~~a~t~~~~~~~~~~~~~a 461 (717) +.. ...++.+|++=....+ . +. ...+. +.+. ...+.+.|-.|..++..++. ..+...-+ T Consensus 62 ~~v---~aa~~naG~~w~a~~~----p-~~----~~~~~--~~Av~~a~~~~s~E~V~v~~p~t~~------a~i~aaq~ 121 (369) T protein:vir:27 62 AIV---KAAQLNGKQAWTAGVM----I-LS----EEDNW--QDAVKKANEVSSFEFVVLGFDAETK------AMIEDAIT 121 (369) T ss_pred HHH---HHHHhCCCCceEEEEE----E-eC----CchhH--HHHHHhhhhhCCccEEEEecCcccH------HHHHHHHH Confidence 111 1112233322110000 0 00 00000 0000 00112223333222211110 00000001 Q ss_pred HHHHHHhhcccceeEEecCC--CcchhhHHHHHHHHHHHHhhhhhhhhcccccccccchhhhhccccceeEEEeCcEEEE Q lcl|Aclame:pro 462 LACAVMSHYNSVTIGIIPTT--TPSDISLAGVEEHVKKLENYANEFYMRDRFGNIIFDADRNKIDLGQFIEVVAGPDFIV 539 (717) Q Consensus 462 ~~~~~~s~~~~~~i~ii~~~--~~~~~~~a~v~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~v~~p~~~v~ 539 (717) .....+..+.+....++... ...........+|+..+..+..- ..+.++.++-.++.. T Consensus 122 ~a~el~~~~~R~vffi~e~~~~~~~~~~~e~w~dy~a~l~al~~g-------------------~a~~~V~vv~~~~~~- 181 (369) T protein:vir:27 122 LRTELKNSLGREVGVLCQLPAINNDPTNGQTWSEWLADTVDIPKD-------------------VASEYISVVPNVHAA- 181 (369) T ss_pred HHHHHHHhcCCeEEEEEeccccCCCccccCCHHHHHHHHHHHhhc-------------------cCcccceeeeeeccc- Confidence 11112222333433333211 10001111122222222111100 012233333111110 Q ss_pred ecccCcceeechhHHHHHHHhcC--CcccccCCcee---ccccccc-----ccCCHHHHHHHHhCCcEEEEEEcCc-eEE Q lcl|Aclame:pro 540 RNTRLGQMASTPDASYIGMVSQL--KTQSAPTNKPL---PSVTALR-----YTYSANQLNRLTKARFATFKYKQDG-SIG 608 (717) Q Consensus 540 ~~~~~~~~~~p~ag~vAGl~A~~--gv~~SpaNk~L---~gv~~l~-----~~lt~~e~d~L~~~GI~~ir~~~g~-G~~ 608 (717) ....|.+||.++.+ .++.||....- .|...+. ..|+.+.++.|.++|+.+.+.++|. |++ T Consensus 182 ---------gn~~G~~aGRl~n~aVsIadsp~RVktG~l~g~~~~p~d~~g~~l~~a~l~aLd~agysvp~~Y~gy~G~Y 252 (369) T protein:vir:27 182 ---------GDTLGKYAGRLANKEVSIADSPARVQTGSVLGNTELMKDKAGKALDLATLKALESNRIAVPMWYPDYPGQY 252 (369) T ss_pred ---------cchHHHHHHHHHhcccchhcCcceeeecccccccccccCCCCcccCHHHHHHHHhCCCeEEEeeCCCCceE Confidence 12468889988765 56889987643 3332222 2377889999999999999999987 999 Q ss_pred EEeceecCCCCccceeeehhhhHHHHHHHHHHHHHHhcccc--C-CHHHHHHHHHHHHHHHHHHHhCCceecceeeeecC Q lcl|Aclame:pro 609 VVDAPTSAHAGSDYTRLSTARIVKEAVNAVREVADPFIGEP--N-DTGNRNALTAAVDKRLSKMIENKALLGFDFRLVVT 685 (717) Q Consensus 609 v~g~rTt~s~ds~~~~I~vrR~~d~I~~~I~~~~~~~Igep--N-~~~~~~~i~~~I~~fL~~L~~~GaI~G~~~~~~~t 685 (717) +-+++|++...+||++|..+|++|++.+.+|...-..|+.+ | ++......+..+..-|++|.+.+ |.-++... T Consensus 253 w~d~~tl~~~gsDYq~iE~~RVvdKa~R~vR~~Ai~~i~Dr~lnstp~sia~~~~~~~~pLr~M~ks~----fpgei~~P 328 (369) T protein:vir:27 253 WTTGRTLDVPGGDYQDIRHIRVAMKAARKVRIRAIARIADRTLNSTPQSIAAAKLYFTQDLRTMALTG----VPGEIYPP 328 (369) T ss_pred EeCceEeccCCCCeehhhhhhHHHHHHHHHHHHHHHHhcCcccccChhHHHHHHHHHhhHHHHHHhhc----CCeEEecC Confidence 99999999899999999999999999999998777777764 3 34455667777888899997653 33232222 Q ss_pred hh-hh-----hCCEEEEEEEEEccccccEEEEEEEEeC Q lcl|Aclame:pro 686 PQ-QE-----LLGEGSIELSLEAPNELRRLTTIVSLSA 717 (717) Q Consensus 686 ~~-~i-----~~G~l~v~i~v~P~~p~e~I~v~i~~ta 717 (717) ++ ++ .+.++.|-+.++|..--..|++.|.+-- T Consensus 329 ~d~dI~i~w~~k~~V~I~~~vrP~~~pk~it~~I~ldl 366 (369) T protein:vir:27 329 EDEDIQIKWVNSTDVEIYMSVQPYECPVKITIAISVKQ 366 (369) T ss_pred CCCceEEEeeccceEEEEEEEeeccCCceEEEEEEEec Confidence 21 12 3456778888889999999999999888 No 62 >protein:vir:80779 Length: 569 # NCBI annotation: putative tail sheath protein # Family: family:all:2449 # MgeID: mge:1885 # MgeName: phiEF24C # Cross-refs: genbank:acc:YP_001504132;genbank:gi:158079319;genbank:GeneID:5666428 Probab=99.23 E-value=2.3e-10 Score=73.37 Aligned_cols=531 Identities=12% Similarity=0.045 Sum_probs=173.5 Q ss_pred CCcchhccc----CCceeEEEecCccccCcCCCCCcceeEEEEEeeccCCcccceec-CHHHHHHhhCCcccccCCcchH Q lcl|Aclame:pro 1 MAGFDQYQA----IPGHNARFKDGNLNLKSDPNPRETESVVLLGTATDGPVMQPVRV-TPETAYNIFGKVAHENGVYNGA 75 (717) Q Consensus 1 ~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~gp~~~~~~~-~~~~~~~~fg~~~~~~~~~~~~ 75 (717) |+. +|||. -|||++++.|++. .++++.+|+.+++||.|++||.++|++| ++.+|+++||. | T Consensus 1 ~~~-~~~~~~~~~~Pgv~~~~~~~~~---~~~~~~~~~~~~~ig~a~~G~~~~~~~~~~~~~~~~~f~~----------g 66 (569) T protein:vir:80 1 MAV-EQFPRKKVSRPHTEITVDTSGI---GGSSSSSDKTLMLVGSAKGGKPDTVYRFRNYQQAKQVLRS----------G 66 (569) T ss_pred Cee-eeecCCccccCceEEEEecCCC---cCCCCCCceeEEEEEEeCCCCCceeEEecCHHHHHHHhcC----------C Confidence 764 44654 6999999999999 9999999999999999999999999999 69999999984 5 Q ss_pred HHHHHHHHHH------HccCCcEEEEEEecCcceeeeeecccccccccccCCcccceeecCcccceeeccCCcceeeeEE Q lcl|Aclame:pro 76 TLLPKFEELW------AAGNRDIRLMRTTGVNAVSSLLGTSYSKNSKEVAEDKLGGAQARGNVAATFTLPNGGIVEATFL 149 (717) Q Consensus 76 ~~~~~~~~~~------~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (717) .|+.|.+.|| -+|+..||+||+-+.++.+. ...+.+..+...|.|+-.+..+ | T Consensus 67 ~l~~a~~~a~~~~~~~~~~~~~~~~~rv~~a~~a~~------------~~~~~~~~a~~~g~~~n~i~v~---------l 125 (569) T protein:vir:80 67 DLLDAIELAWNASDVNTASAGDILAVRVEDAKNATL------------TKGGLTFASTIYGVDANEIQVA---------L 125 (569) T ss_pred chhHHHHhhccCccccccCceEEEEEEcCCCeeeee------------eccceeeeeeeccCCCceEEEE---------E Confidence 6788887777 48888999999964443321 1233444456666666332221 0 Q ss_pred EeecceeecCceeEeccccceeeccccccchhheeecCCcccccccceeehhhhhhhhheeeeeeeEeecccccccccCc Q lcl|Aclame:pro 150 LKARGVIIPPNNYTLDVGTEEDMKAGTQPTFAQVLLNENVADMESEITVSYEFTYKDAQGETKTSEVLDNNTDKDGKPMI 229 (717) Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~gelld~~ie~~~~p~~ 229 (717) .. +.....-. +++.|... .+.++.+. | T Consensus 126 ~~--~~~~~~~~----------------------------------~~v~~~~~--------~~~~~~~~-i-------- 152 (569) T protein:vir:80 126 ED--NNLTHTKR----------------------------------LTVAFSKD--------GYKKVFDN-L-------- 152 (569) T ss_pred ec--CcCCccee----------------------------------eEEeeecC--------CCcccccc-c-------- Confidence 00 10000000 11111110 00111110 0 Q ss_pred ccCCceEEEEEe-eccccceeeecCccccccchheeccceeEEEEecCccccceEEEEeeccccccccc-ceEEEeeccc Q lcl|Aclame:pro 230 AKGADVTIKLEH-VALAGLKLYADGIEVVDAKAFTVAGDQLTIHSNSKMKLGASLEAQYAYNLVEVIQP-VIELESIFGG 307 (717) Q Consensus 230 ~~~ag~i~a~r~-~~a~~a~~~~~g~~~~~s~~~g~~an~i~v~l~d~~~t~~~l~v~~a~~~~~~~~d-~i~l~a~~~G 307 (717) |+++.+.. .....+..+..+-.+ .-.+-.+.++. .....+.+++.. +++....++ ..++.+++++ T Consensus 153 ----g~v~si~ytg~~~~a~~~~~~~~~------~~~a~~l~~~~--g~~~~~~~~v~~-~~~~~~~~~~~~~lv~~~~~ 219 (569) T protein:vir:80 153 ----GKIFSIQYKGSEAQANFTIAQDSI------SKKATTLTLNV--GSEPESTTEVMK-YELGQGVYSETNVLVSAINS 219 (569) T ss_pred ----cceeeEEEeeccccceEEeecCcC------cceeEEEEEEe--cCCcceeEEEEe-eccCCccchhhhhhhhhcCC Confidence 11111110 001111111111100 00011111111 111122222222 222233332 2355666777 Q ss_pred cccceEEEEEecCCceEEEEEeeeccCccceeeeeeeeccccchhHHHHHHHhhcCccceeEEeeeccccc------ccc Q lcl|Aclame:pro 308 GVYNDIMRKVESKDGAVTVTITKPESKRGMISEDPLVFKSGDYTNFKMLVDAINNHPFNNVVRARTKPEFE------ATF 381 (717) Q Consensus 308 ~~GN~i~I~v~~~~~~~t~~lt~~~~~~~~~~~~~~~l~~g~~~~~~~lv~~IN~~~~~~~~~a~~~~~~~------~~l 381 (717) ++++..+.............+...+ .+.+.... ........+++..++.+. ++.+.....+. ..| T Consensus 220 ~~~f~a~~~~~~~~~~~~~~~d~~~----~~~~~t~~--~~~~~~~~di~~~~~~~~---~v~~~~~~~~~l~~~~~~~L 290 (569) T protein:vir:80 220 LPDWEAKFFPIGDKNLPTDALEAVT----KVDVKTEA--VFVGALAGDIAKQLEYND---YVTVAVDATKPVEDFELTNL 290 (569) T ss_pred ccCceEEEEecCCCcceehhccchh----heeccccc--eeeehhHHHHHHhhcCCc---eEEEEecCCcceeeecceee Confidence 7766665543222211111110000 00011000 011122344555544332 12111111110 111 Q ss_pred ccccchhhhhhccCCccCcccchhhhhhhcccccccccchhhhhhhhcccccc---ce-eEEeccccCCcccccccchhH Q lcl|Aclame:pro 382 TSTLQAAADAKFSGGKDELSLDKEEMYKRLGGEKNEEGFVTKQGAYQYLENYE---VD-YVIPLGVHADTKLIGKYDDFA 457 (717) Q Consensus 382 ~s~~~~~~~~~ltgG~dG~~~~a~e~~~al~~~~~~~~~v~~~~~~~~le~~~---vd-~vi~~~~~a~t~~~~~~~~~~ 457 (717) +...+-...... .+..+...++....+....... . ....+-+..+... -. +.+...... .+ T Consensus 291 tGG~dG~~~~~~---~~~l~~le~~~~~~i~~~t~d~-a-v~~~l~a~vkr~r~~g~~~~aVvg~~~~--------~~-- 355 (569) T protein:vir:80 291 TGGSDGTAPESW---ANKFPLLANEGGYYLVPLTDKQ-A-VHSEALAFVKDRTDNGDPMRIIVGGGTN--------ET-- 355 (569) T ss_pred cCCCCCCccchH---HHHHHHHhhCCcEEEEecCCCh-H-HHHHHHHHHHHHHhCCCcEEEEecCCCC--------CC-- Confidence 111000000000 0000000000000000000000 0 0000111111100 01 111211111 11 Q ss_pred HHHHHHHHHHhhcccceeEEecCCC-cchh----hHHHHHHHHHHHHhhhhhhhhcccccccccchhhhhccccceeEEE Q lcl|Aclame:pro 458 YQLALACAVMSHYNSVTIGIIPTTT-PSDI----SLAGVEEHVKKLENYANEFYMRDRFGNIIFDADRNKIDLGQFIEVV 532 (717) Q Consensus 458 ~~~a~~~~~~s~~~~~~i~ii~~~~-~~~~----~~a~v~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~v~ 532 (717) ...++.....++..++..+.... .... .......+.-.++.+. +-.+ ...+.....+ T Consensus 356 --~~~~~~~a~~~n~e~vv~v~~~~~~~~~~g~~~~~~~~~~aa~vAG~~---A~~~-------------~~~S~T~k~i 417 (569) T protein:vir:80 356 --VEESITRATNLRDPRASLVGFSGTRKMDDGRLLKLPGYMMASQIAGIA---SGLE-------------VGEAITFKHF 417 (569) T ss_pred --HHHHHHHHhhcCCCeEEEEecCceeecCCCcceeechhhHHHHHHHHH---hcCc-------------cccCccceee Confidence 12222223334445544432110 0000 0000000011111110 0000 0000000000 Q ss_pred eCcEEEEecccCcceeechhHHHHHHHhcCCc-ccccCC-----ceecccccccccCCHHHHHHHHhCCcEEEEEEcCce Q lcl|Aclame:pro 533 AGPDFIVRNTRLGQMASTPDASYIGMVSQLKT-QSAPTN-----KPLPSVTALRYTYSANQLNRLTKARFATFKYKQDGS 606 (717) Q Consensus 533 ~p~~~v~~~~~~~~~~~p~ag~vAGl~A~~gv-~~SpaN-----k~L~gv~~l~~~lt~~e~d~L~~~GI~~ir~~~g~G 606 (717) +...+... ..-.-.-..+.++.-+ ...+.. +.++++..... -++.+...+. ++|.+.- T Consensus 418 -~~~~i~~~-------lt~~e~~~li~~G~~~l~~~~~~~~~v~~~vn~itT~t~-~~~~~~~~i~-----viRv~D~-- 481 (569) T protein:vir:80 418 -NVTSVDRV-------FESSQLDMLNESGVISIEFVRNRTLTAFRVVQDVTTYND-KSDPVKNEMS-----VGEANDF-- 481 (569) T ss_pred -cccccccc-------CCHHHHHHHHhCCeEEEEEecCceEEEEEEeccceecCC-CCCchhhhhh-----hhHHHHH-- Confidence 00000000 0111122223332212 122211 11222222111 0111111111 1111100 Q ss_pred EEEEeceecCCCCccceeeehhhhHHHHHHHHHHHHHHhccc--cCCHHHHHHHHHHHHHHHHHHHhCCceeccee--ee Q lcl|Aclame:pro 607 IGVVDAPTSAHAGSDYTRLSTARIVKEAVNAVREVADPFIGE--PNDTGNRNALTAAVDKRLSKMIENKALLGFDF--RL 682 (717) Q Consensus 607 ~~v~g~rTt~s~ds~~~~I~vrR~~d~I~~~I~~~~~~~Ige--pN~~~~~~~i~~~I~~fL~~L~~~GaI~G~~~--~~ 682 (717) +..+-+.+.. +.--.+.+..+....+...|...+++...+ .-+-. -..+ +- .+.+-++ +. T Consensus 482 -i~~dir~~~~-~~yiGk~nn~~~r~~v~~~i~~~L~~l~~~gaI~~~~-~~dv-----------~v--~~~~d~~~v~~ 545 (569) T protein:vir:80 482 -LVSELKIELD-NNFIGTKVIDTSASLIKNFIQSFLDNKKRAREIQDYT-PEEV-----------QV--VLEGDVASISM 545 (569) T ss_pred -HHHHHHHHHH-hhcCcccCChhHHHHHHHHHHHHHHHHHhCCcccCCC-ccce-----------EE--EecCCEEEEEE Confidence 0000000000 000011222333444455555555443321 11000 0000 00 0111122 22 Q ss_pred ecChhhhhCCEEEEEEEEEccccccEEEEEEEEeC Q lcl|Aclame:pro 683 VVTPQQELLGEGSIELSLEAPNELRRLTTIVSLSA 717 (717) Q Consensus 683 ~~t~~~i~~G~l~v~i~v~P~~p~e~I~v~i~~ta 717 (717) ...|- ..-.++++.|.+.|- +++| T Consensus 546 ~v~Pv-~~~ekI~~ti~~~~~----------~~~~ 569 (569) T protein:vir:80 546 TVMPI-RSLNKITVQLVYKQQ----------ILTA 569 (569) T ss_pred EEEEc-ccccEEEEEEEEeee----------eecC Confidence 22221 223578888888872 2233 No 63 >protein:vir:100829 Length: 607 # NCBI annotation: hypothetical protein # Family: family:all:2449 # MgeID: mge:1633 # MgeName: LP65 # Cross-refs: genbank:acc:YP_164738;genbank:gi:56693151;genbank:GeneID:3197462 Probab=99.09 E-value=1.4e-10 Score=74.67 Aligned_cols=548 Identities=12% Similarity=0.112 Sum_probs=218.1 Q ss_pred CCcchh--------cccCCceeEEEecCccccCcCCCCCcceeEEEEEeeccCCcccceec-CHHHHHHhhCCcccccCC Q lcl|Aclame:pro 1 MAGFDQ--------YQAIPGHNARFKDGNLNLKSDPNPRETESVVLLGTATDGPVMQPVRV-TPETAYNIFGKVAHENGV 71 (717) Q Consensus 1 ~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~gp~~~~~~~-~~~~~~~~fg~~~~~~~~ 71 (717) +..-|. +---||+++++.|+++ ...++.++.+++++|+|++||+++|+++ ++.+|+++||. T Consensus 5 ~~~~~~~~~~~~~~~~~~pgv~~~~~~~~~---~~~~~~~~~~~~~iG~a~~G~~~~~~~~~~~~~a~~~f~~------- 74 (607) T protein:vir:10 5 ITSAESYKRIYPLFYDSRPHVETNFDDSRL---SNTASDSAKNIFMLGSATNGDPTKVYEIRTSQQATKIFGS------- 74 (607) T ss_pred ecchhhHHHHhCCCCccCCceEEEEecCcC---cCCCCCCcceEEEEEEeCCCCCceEEEEcchhHHHHhhcC------- Confidence 112222 3346999999999999 9999999999999999999999999999 59999999983 Q ss_pred cchHHHHHHHHHHH------HccCCcEEEEEEecCcceeeeeecccccccccccCCcccceeecCcccceeecc-CCcce Q lcl|Aclame:pro 72 YNGATLLPKFEELW------AAGNRDIRLMRTTGVNAVSSLLGTSYSKNSKEVAEDKLGGAQARGNVAATFTLP-NGGIV 144 (717) Q Consensus 72 ~~~~~~~~~~~~~~------~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 144 (717) |.|+.|++.|| .+|+..||+||+-..++.+.. .++..-.+...|.++-.|+.+ ++.+- T Consensus 75 ---g~l~~a~~~a~~~~~~~~~g~~~~~~~rv~~~~~a~~~------------~~~~~~~~~~~~~~~~~i~~~l~~~~~ 139 (607) T protein:vir:10 75 ---GDLVDGIKLAFDPTGNSVTNGGTVYALRVDNAKQASLV------------KDGLTFTSSIFGTNANQVSVALDNDVF 139 (607) T ss_pred ---cchHHHHHHhhccccCCccCCceEEEEeCCCcccccee------------cccccccccccccCCCceEEEEEecCC Confidence 67899998899 799999999999644433211 111111244555555433332 22111 Q ss_pred e--eeEEEeecceeecCceeEeccccceeeccccccchhheeecCCcccccccceeehhhhhhhhheeeeeeeEeecccc Q lcl|Aclame:pro 145 E--ATFLLKARGVIIPPNNYTLDVGTEEDMKAGTQPTFAQVLLNENVADMESEITVSYEFTYKDAQGETKTSEVLDNNTD 222 (717) Q Consensus 145 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~gelld~~ie 222 (717) + +.++.|.. |. ....|- +.|..+.+.|.-.-..|.-. ++ T Consensus 140 ~~~~~~~~~~~-----------d~---------~~~~~~---------n~g~~~~i~y~g~~~~a~~~----------v~ 180 (607) T protein:vir:10 140 GVPRITVNYSP-----------DN---------YERTYT---------NIGQMFSITYSGKSASAGYT----------VS 180 (607) T ss_pred CccceeEEeec-----------cc---------ceeeee---------eccceeecccCcccccccce----------ee Confidence 0 11122211 11 000000 11333333443322221111 12 Q ss_pred cccccCcccCCceEEEEEeeccccceeeecCccccccchheeccceeEEEEecCccccceEEEEeecccccccccceEEE Q lcl|Aclame:pro 223 KDGKPMIAKGADVTIKLEHVALAGLKLYADGIEVVDAKAFTVAGDQLTIHSNSKMKLGASLEAQYAYNLVEVIQPVIELE 302 (717) Q Consensus 223 ~~~~p~~~~~ag~i~a~r~~~a~~a~~~~~g~~~~~s~~~g~~an~i~v~l~d~~~t~~~l~v~~a~~~~~~~~d~i~l~ 302 (717) .+|+ |..+.+-+++.+.....++.....+ +...|. .+...+.|. .+.+.++.++. +...|+ T Consensus 181 ~~~~-----g~~~~lt~~~~~~~~~~~~V~~~~l-~~~~~~----t~~~l~~di-n~~~~~~A~~~--------g~~~i~ 241 (607) T protein:vir:10 181 HDTD-----GKAILLTLGSGDSIDKLTNVATFDL-TMSKYD----TIAKLMQAI-SATPNFSASVV--------GSPSVN 241 (607) T ss_pred ecCC-----CceeEEEecCCCccceeeeeecccc-cccccc----hHHHHHHHh-hcCCceEEEEe--------ccccee Confidence 2222 2234445555555555444433321 111221 111111110 11233333332 234689 Q ss_pred eeccccccceEEEEEecCCceEEEEEeeeccCccceeeeeeeeccccchhHHHHHHHhhcCccceeEEeeeccccccccc Q lcl|Aclame:pro 303 SIFGGGVYNDIMRKVESKDGAVTVTITKPESKRGMISEDPLVFKSGDYTNFKMLVDAINNHPFNNVVRARTKPEFEATFT 382 (717) Q Consensus 303 a~~~G~~GN~i~I~v~~~~~~~t~~lt~~~~~~~~~~~~~~~l~~g~~~~~~~lv~~IN~~~~~~~~~a~~~~~~~~~l~ 382 (717) ++|++..++.+.|++......+. ..+.....+.. ....+... .....++..+................+ .+ T Consensus 242 tky~d~~~~~i~V~~~~~iv~a~--~~D~~~~~~~~--~~~~~t~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~- 312 (607) T protein:vir:10 242 TSYLDEVTSPVDVKTAPAVVTAK--IGDAISKLGYD--PYVVVTQT--SNNKPIVNGVSAGTGSATASVTTAPES--FP- 312 (607) T ss_pred eeccccccceeEEEEeeeeechh--hhhhhhccccc--ceEEeeec--ccchhhhhhhhccccceeeeeeccccc--cc- Confidence 99999999999888742211000 00000000000 01111111 111222323222221111111111111 11 Q ss_pred cccchhhhhhccCCccCcccchhhhhhhcccccccccchhhhhhhhccccccceeEEeccccCCcccccccchhHHHHHH Q lcl|Aclame:pro 383 STLQAAADAKFSGGKDELSLDKEEMYKRLGGEKNEEGFVTKQGAYQYLENYEVDYVIPLGVHADTKLIGKYDDFAYQLAL 462 (717) Q Consensus 383 s~~~~~~~~~ltgG~dG~~~~a~e~~~al~~~~~~~~~v~~~~~~~~le~~~vd~vi~~~~~a~t~~~~~~~~~~~~~a~ 462 (717) . .-....|+||.||+...+ + +..+..++.++++.+++.. ....++..+.. T Consensus 313 --a-~~a~~~LtGGtdG~~~~t--y----------------~dal~aLe~~e~~~i~~~t---------~d~ai~~~l~a 362 (607) T protein:vir:10 313 --A-NFDTAFLTGGSTGDVPVS--W----------------ADKFNGAIGNNVYYIIPLT---------SEENIHAELQA 362 (607) T ss_pred --c-ccceeeeeCCCCCCchhh--H----------------HHHHHHHhhcCceEEEecC---------CCHHHHHHHHH Confidence 1 112346899999963211 1 1223446667777665431 11235678999 Q ss_pred HHHHHhhcccceeEEecCCCcchhhHHHHHHHHHHHHhhhhhhhhcccccccccchhhhhccccceeEEEeCcEEEEecc Q lcl|Aclame:pro 463 ACAVMSHYNSVTIGIIPTTTPSDISLAGVEEHVKKLENYANEFYMRDRFGNIIFDADRNKIDLGQFIEVVAGPDFIVRNT 542 (717) Q Consensus 463 ~~~~~s~~~~~~i~ii~~~~~~~~~~a~v~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~v~~p~~~v~~~~ 542 (717) ||+.++..++.++.+++..+.... ++...+...+..+..+.-.......+ .+.......| + T Consensus 363 ~vkr~~~~g~~~~aVlg~~~~~t~-----~~~~t~a~~~N~ervv~V~~~~~~~~-~G~~~~~~~~-------~------ 423 (607) T protein:vir:10 363 FIDEQHVLGYNYHAFVGGGFAEPL-----EQILSRQVNINDSRFGLVGQSGHVQE-GGESVHVPAY-------L------ 423 (607) T ss_pred HHHHHHhCCCcEEEEecCCCCCCH-----HHHHHHHHhhCCCcEEEEecCeeEee-CCcceeccHH-------H------ Confidence 999999888888888877654432 22222222222221111111100000 0000000000 0 Q ss_pred cCcceeechhHHHHHHHhcCCc----------ccccCCcee-----cccccccccCCHHHHH-HHHhCCcEEEEEEcCce Q lcl|Aclame:pro 543 RLGQMASTPDASYIGMVSQLKT----------QSAPTNKPL-----PSVTALRYTYSANQLN-RLTKARFATFKYKQDGS 606 (717) Q Consensus 543 ~~~~~~~p~ag~vAGl~A~~gv----------~~SpaNk~L-----~gv~~l~~~lt~~e~d-~L~~~GI~~ir~~~g~G 606 (717) ....-+|.+||+.....+ ..-.++.++ .|+.-+...-...... .-.-.+|+++....+.. T Consensus 424 ----~Aa~vAGl~Ag~~~~~SlT~k~i~~~~v~~~lt~~e~e~ai~~Gv~~l~~~~~~~~~~~vrIv~~ItT~t~~~~~~ 499 (607) T protein:vir:10 424 ----MAAYVGGLSSSLGVAVPITNKKLALVDLDQNFSGDDLNTLNQNGVIGIEHLVNRNATGGYYIVQDVSTNTVSSSHV 499 (607) T ss_pred ----HHHHHHHHHhcCccccCcccceeccccccccCCHHHHHHHHhCCeEEEEEccCccccceEEEeeeeeeccCCCCcc Confidence 000112333333211110 000000000 0111110000000000 00011222221111111 Q ss_pred EEEEe-ceecC--------CCCccc-eeeehhhhHHHHHHHHHHHH--HHhccccCCHHHHHHHHHHHHHH-HHHHHhCC Q lcl|Aclame:pro 607 IGVVD-APTSA--------HAGSDY-TRLSTARIVKEAVNAVREVA--DPFIGEPNDTGNRNALTAAVDKR-LSKMIENK 673 (717) Q Consensus 607 ~~v~g-~rTt~--------s~ds~~-~~I~vrR~~d~I~~~I~~~~--~~~IgepN~~~~~~~i~~~I~~f-L~~L~~~G 673 (717) ++=+. -|+++ .-...| .+.+..+....+...+...+ +|.. -...|..| ..+++- T Consensus 500 ~~~i~viRv~D~i~~dir~~~~~~yIGk~nnd~~~~~vk~~i~~~L~~~~l~-----------~~gaI~df~~edv~v-- 566 (607) T protein:vir:10 500 DGSLYLGELTDFLFDNLRFVLRDTYIGSNIRSTSADDIKSTVASYLYSEMNN-----------DDGLIVDFSESDIVV-- 566 (607) T ss_pred hheeehhhhHHHHHHHHHHHHhhcCCcccCCcchHHHHHHHHHHHHHHHHHH-----------hcCceeCCCccccEE-- Confidence 11110 00000 000000 01111122222222222221 1110 00011111 001100 Q ss_pred ceecceeee--ecChhhhhCCEEEEEEEEEccccccEEEEEEEEeC Q lcl|Aclame:pro 674 ALLGFDFRL--VVTPQQELLGEGSIELSLEAPNELRRLTTIVSLSA 717 (717) Q Consensus 674 aI~G~~~~~--~~t~~~i~~G~l~v~i~v~P~~p~e~I~v~i~~ta 717 (717) ...+-.|.+ ...|- ..-.++++.+.+.|. +++| T Consensus 567 ~~~~D~v~v~~~v~Pv-~~iekIyvtv~v~~~----------~~~~ 601 (607) T protein:vir:10 567 TISGTVVYIQFAVAPT-QEIKNIVVSGTYSNY----------SATS 601 (607) T ss_pred eeCCCEEEEEEEEEEc-ccceEEEEEEEEEEE----------EEee Confidence 011112222 22221 223578999988873 4455 No 64 >protein:vir:96586 Length: 587 # NCBI annotation: ORF011 # Family: family:all:2449 # MgeID: mge:1623 # MgeName: Twort # Cross-refs: genbank:acc:YP_238553;genbank:gi:66391266;genbank:GeneID:5130368 Probab=99.04 E-value=7.3e-10 Score=70.68 Aligned_cols=482 Identities=13% Similarity=0.021 Sum_probs=151.3 Q ss_pred CCcchhcc----cCCceeEEEecCccccCcCCCCCcceeEEEEEeeccCCcccceec-CHHHHHHhhCCcccccCCcchH Q lcl|Aclame:pro 1 MAGFDQYQ----AIPGHNARFKDGNLNLKSDPNPRETESVVLLGTATDGPVMQPVRV-TPETAYNIFGKVAHENGVYNGA 75 (717) Q Consensus 1 ~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~gp~~~~~~~-~~~~~~~~fg~~~~~~~~~~~~ 75 (717) |+- +||| --|||++++.|+++ ..+++.+++.++++|+|++||+++|++| ++.+|+++||. | T Consensus 1 ~~~-~~~~~~~~~~Pgv~~~~~~~~~---~~~~~~~~~~~~~iG~a~~g~~~~~~~~~~~~~~~~~~g~----------G 66 (587) T protein:vir:96 1 MAK-DIFPRRPIQRPHASIEVDSSGI---GGSASNSEKILCLIGKAEGGEPNTVYQVRNYAQAKSVFRS----------G 66 (587) T ss_pred Cee-eeeCCCcccCCceEEEEecCCc---cCCCCCCCceEEEEEEecCCCCceeEEEcChHHHHHhhcC----------C Confidence 652 3344 36999999999999 8899999999999999999999999999 69999999995 4 Q ss_pred HHHHHHHHHH----HccCCcEEEEEEecCcceeeeeecccccccccccCCcccceeecCcccceeecc--CCcceee--e Q lcl|Aclame:pro 76 TLLPKFEELW----AAGNRDIRLMRTTGVNAVSSLLGTSYSKNSKEVAEDKLGGAQARGNVAATFTLP--NGGIVEA--T 147 (717) Q Consensus 76 ~~~~~~~~~~----~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~--~ 147 (717) .|+.|.+.|| ++|+..|++||+-..++.+ ...+...-.+.++|.|+=.+..+ .+++.+. . T Consensus 67 ~l~~ai~~a~~~~~~~g~~~~~a~rv~~~~~a~------------~~~~~~~~~~~~~g~~~n~i~v~~~~~~~~~~~~~ 134 (587) T protein:vir:96 67 ELLDAIELAWGSNPQYTAGKILAMRVEDAKASQ------------LEKGGLRVTSKIFGSVSNDIQVALEKNTITDSLRL 134 (587) T ss_pred cHHHHHHHHhccCcCCCceEEEEEecCCCccce------------eecccccccccccCCCCceEEEEEEeccCCCccce Confidence 5777766667 7999999999996444432 11222222355566666443332 2222111 1 Q ss_pred EEEeecceeecCceeEeccccceeeccccccchhheeecCCcccccccceeehhhhhhh-hheeeeeeeEeecccccccc Q lcl|Aclame:pro 148 FLLKARGVIIPPNNYTLDVGTEEDMKAGTQPTFAQVLLNENVADMESEITVSYEFTYKD-AQGETKTSEVLDNNTDKDGK 226 (717) Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-A~~~~~~gelld~~ie~~~~ 226 (717) .++|.+++ ..++-|. + |..+.+.|.-.-+. .-+.+..+.-++| -. T Consensus 135 ~~~~~~~~----~~~~~~n-------~------------------G~v~~i~y~g~~~~a~~~~~~~~~~~~A-----~~ 180 (587) T protein:vir:96 135 RVVFQKDN----YQEVFDN-------L------------------GNIFSINYKGEGEKATFSVEKDKETQEA-----KR 180 (587) T ss_pred EEEEecCC----ceeeccc-------c------------------CceEEEEecccccceeEeeccCccccee-----ee Confidence 11221111 0001111 0 11122222110000 0000000000111 00 Q ss_pred cCcccCCceEEEEEeeccccce--eeec---CccccccchheeccceeEEEEecCccccceEEEEee-cccc---cc-c- Q lcl|Aclame:pro 227 PMIAKGADVTIKLEHVALAGLK--LYAD---GIEVVDAKAFTVAGDQLTIHSNSKMKLGASLEAQYA-YNLV---EV-I- 295 (717) Q Consensus 227 p~~~~~ag~i~a~r~~~a~~a~--~~~~---g~~~~~s~~~g~~an~i~v~l~d~~~t~~~l~v~~a-~~~~---~~-~- 295 (717) -....++.++++.|+..-...+ .... ....++.|--|...|.++++..|+...-...+..+. .... .. . T Consensus 181 l~l~gg~~~v~~yrl~~g~~~~~~~~~~~~~~~~~~tAky~g~~~n~~~v~v~d~~~~~~~k~~~~y~~t~~~di~~~~~ 260 (587) T protein:vir:96 181 LVLKVDEKEVKAYELNGGAYSFTNEIITDINELPDFEAKLSPFGDKNLESRKLDEATDVDIKGKAVYVKAVFGDIENQTQ 260 (587) T ss_pred eEEEecCceEEEEEeCCCchhhhhhhhhhhccccceEEEeecccCceeEEEeeccccccccceEEEeehhhhhhhhhhhc Confidence 0011123455666665433221 1111 111234555588889998887665433222222221 0000 00 0 Q ss_pred ccc-eEEE-----------eeccccccceEEEEEecCCc-eEEEEEeeecc-Cccc--------------eeeeeeeecc Q lcl|Aclame:pro 296 QPV-IELE-----------SIFGGGVYNDIMRKVESKDG-AVTVTITKPES-KRGM--------------ISEDPLVFKS 347 (717) Q Consensus 296 ~d~-i~l~-----------a~~~G~~GN~i~I~v~~~~~-~~t~~lt~~~~-~~~~--------------~~~~~~~l~~ 347 (717) .+. ..++ ......+++.+. +.+...+ ...+..+..+- ..+. .+.......+ T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~~~~~~~~~~~~~~aLtGG~dG~~~~~y~~~l~ale~~~~~~i~~~t 339 (587) T protein:vir:96 261 YNQYVKFEQLPEQASEPSDVEVHAETESATV-TATSKPKAIEPFELTKLSGGTNGEPPTSWSAKLEKFKNEGGYYIVPLT 339 (587) T ss_pred cccceeeccccchhhhhhcccccccccceee-eecccccccccccceeeecCCCCCCcccHHHHHHHHhhCCcEEEEecC Confidence 000 0000 000011111110 0000000 00000000000 0000 0001111111 Q ss_pred ccc---hhHHHHHHHhhcCccceeEEeee-ccccc-----------------cc---------------cccccchhhh- Q lcl|Aclame:pro 348 GDY---TNFKMLVDAINNHPFNNVVRART-KPEFE-----------------AT---------------FTSTLQAAAD- 390 (717) Q Consensus 348 g~~---~~~~~lv~~IN~~~~~~~~~a~~-~~~~~-----------------~~---------------l~s~~~~~~~- 390 (717) .+- +....++....+... .. .+.. .+.++ .. .......+.. T Consensus 340 ~d~ai~~~l~a~vk~~r~~gk-~~-~aVlg~~~~~~~~~~~~~a~~~n~e~vi~v~~~~~~~~~~~~~~~~~~~~~aa~v 417 (587) T protein:vir:96 340 DRQSVHSEVATFVKNRSDAGE-PM-RAIVGGGTSETKEKLFGRQAILNNPRVALVANSGKFVMGNGRILQAPAYMVASAV 417 (587) T ss_pred CCHHHHHHHHHHHHHHHhCCC-eE-EEEecCCCCCCHHHHHHHHhhcCCCcEEEEecceEEecCCCceeeechhhHHHHH Confidence 111 112223333322111 00 0100 00000 00 0000000000 Q ss_pred hhccCCccCcccchhhhhhhcccc----cccccchhhhhhhhc--cccccceeEEeccccCCccccc-ccchhH----HH Q lcl|Aclame:pro 391 AKFSGGKDELSLDKEEMYKRLGGE----KNEEGFVTKQGAYQY--LENYEVDYVIPLGVHADTKLIG-KYDDFA----YQ 459 (717) Q Consensus 391 ~~ltgG~dG~~~~a~e~~~al~~~----~~~~~~v~~~~~~~~--le~~~vd~vi~~~~~a~t~~~~-~~~~~~----~~ 459 (717) .-+..|.+-....++..+....-. +.+...+...+.+.+ ..+..+. +...+..-++... ....+. .. T Consensus 418 AG~~Ag~~~~~S~T~~~~~~~~v~~~~t~~e~~~~i~~G~~~l~~~~~~~~~--v~~~vnsitT~t~~~~~~~~~i~vir 495 (587) T protein:vir:96 418 AGLVSGLDIGESITFKPLFVNSLDKVYESEELDELNENGIITIEFVRNRMTT--MFRIVDDVTTFPDKNDPVKSEMALGE 495 (587) T ss_pred HHHHhcCccccCccceeeecccccccCCHHHHHHHHhCCeEEEEEecCCcEE--EEEeeccceecCCCCCchhhhhhhHH Confidence 000001100000011001000000 000000011111100 0000000 0000011111111 111111 11 Q ss_pred HHHHHHHHhhcccceeEEecCCCcchh---hHHHHHHHHHHHHhhhhhhhhcccc-cccccchhhhhccccceeEEEeCc Q lcl|Aclame:pro 460 LALACAVMSHYNSVTIGIIPTTTPSDI---SLAGVEEHVKKLENYANEFYMRDRF-GNIIFDADRNKIDLGQFIEVVAGP 535 (717) Q Consensus 460 ~a~~~~~~s~~~~~~i~ii~~~~~~~~---~~a~v~~~~~~~~~~~~~~~~~d~~-~~~~~~~~~~~~~~~~~~~v~~p~ 535 (717) ..|++..-... ...-..++....... ..+.+..+++.+...... .+-. ...............-.+.-+.+- T Consensus 496 v~D~i~~di~~-~~~~~yiGk~nn~~~r~~v~~~i~~~L~~l~~~g~I---~~~~~~dv~v~~~~D~~~v~~~v~Pv~~m 571 (587) T protein:vir:96 496 ANDFLVSELKI-LLEEQYIGTRTINTSASQIKDFVQSYLGRKKRDNEI---QDFPPEDVQVIIEGNEARISLTIFPIRAL 571 (587) T ss_pred HHHHHHHHHHH-HHHhcCCccccCHHHHHHHHHHHHHHHHHHHhCCcc---cCCCccceEEEecCCEEEEEEEEEEcccc Confidence 12222211100 001112222121111 223444555544333222 1100 000000000000000001111111 Q ss_pred EEEEecccCcceeech Q lcl|Aclame:pro 536 DFIVRNTRLGQMASTP 551 (717) Q Consensus 536 ~~v~~~~~~~~~~~p~ 551 (717) .+++-...-......+ T Consensus 572 ekIy~tv~~~~~~~~~ 587 (587) T protein:vir:96 572 KKISVSLVYRQQTLQA 587 (587) T ss_pred eEEEEEEEEEeeeecC Confidence 1111111111111111 No 65 >protein:vir:102819 Length: 648 # NCBI annotation: tail sheath protein # Family: family:all:2449 # MgeID: mge:1610 # MgeName: YS40 # Cross-refs: genbank:acc:YP_874082;genbank:gi:118197689;genbank:GeneID:4496011 Probab=98.96 E-value=1.1e-10 Score=75.15 Aligned_cols=487 Identities=9% Similarity=-0.056 Sum_probs=178.4 Q ss_pred eeeEEE-eecceeecCcee-EeccccceeeccccccchhheeecCCcccccccceeehhhhhhhhheeeeeeeEeecccc Q lcl|Aclame:pro 145 EATFLL-KARGVIIPPNNY-TLDVGTEEDMKAGTQPTFAQVLLNENVADMESEITVSYEFTYKDAQGETKTSEVLDNNTD 222 (717) Q Consensus 145 ~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~gelld~~ie 222 (717) -.. ++ |.+-.+.+|..| ..+++....+...... +.+-.|.+..|.+.++...++++|++..|++|+|.++ ++ T Consensus 1 ma~-~~yf~~~~~~~PGVyvee~~sg~~~i~gv~ts----va~fvG~a~~Gp~~~p~~v~s~~~~~~~fggg~l~~a-v~ 74 (648) T protein:vir:10 1 MAI-SVYFDGKLIKQLGAYVKTDLSAVKQINGVGTG----IVALLGLAEGGETYKPYRLTSFAEAVSIFKGGPLLEH-IK 74 (648) T ss_pred Cee-eeeeCCCCccCCceEEEEeccccccccCCCCc----eEEEEEeeCCCCCceeEEecCHHHHHHHhcCccHHHH-HH Confidence 111 24 355556778888 3444333333333333 3344489999999999999999999999999999998 89 Q ss_pred cccccCcccCCceEEEEEeeccccceeeecCccccccchheeccceeE--EEEecCcccc-ceEEEEeecccccccccce Q lcl|Aclame:pro 223 KDGKPMIAKGADVTIKLEHVALAGLKLYADGIEVVDAKAFTVAGDQLT--IHSNSKMKLG-ASLEAQYAYNLVEVIQPVI 299 (717) Q Consensus 223 ~~~~p~~~~~ag~i~a~r~~~a~~a~~~~~g~~~~~s~~~g~~an~i~--v~l~d~~~t~-~~l~v~~a~~~~~~~~d~i 299 (717) .+|.. |++.++++|+++++++++.++|++ ++++.+|..+|.|+ |+++++..++ .++++.|... ...+|.+ T Consensus 75 ~~F~n----Gg~~~~~vRv~~~~~a~~~~~~~~-~~a~~~g~~gn~i~~~v~~~~~~~~~~~~l~v~~~~~--~~~~d~~ 147 (648) T protein:vir:10 75 AAFIG----GAGEVVAVRIGNPTTASVSIPVAQ-NTSDTSPANLNFVSYEASTRSNQIYVSFDLDENFTSA--NEADDTI 147 (648) T ss_pred HHHhC----CCcEEEEEEcCCCcccceecceeE-EeecccCCCCCceEEEEEEcCCCcCceeEEEEEecCC--Cccccee Confidence 99955 689999999999999999999995 58999999999885 7788888776 5899988643 2444533 Q ss_pred --EEEeeccccccceEEEEEecCCceEEEEEeee-----------ccCccceeeeeeeeccccchhHHHHHHHhhcCccc Q lcl|Aclame:pro 300 --ELESIFGGGVYNDIMRKVESKDGAVTVTITKP-----------ESKRGMISEDPLVFKSGDYTNFKMLVDAINNHPFN 366 (717) Q Consensus 300 --~l~a~~~G~~GN~i~I~v~~~~~~~t~~lt~~-----------~~~~~~~~~~~~~l~~g~~~~~~~lv~~IN~~~~~ 366 (717) .+....+. ++++....+..+... .++.+.-....++..+ ......++..||..... T Consensus 148 v~~i~~~~~~---------y~gt~~~~t~~v~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~~~~v~~~~~~~~~ 216 (648) T protein:vir:10 148 IFTIYQKHPD---------FSVTRETFTFPRKFTTPTVLVKRGSTLFFVDRSIVNAALAAG--PAFQTALINLLKEQLQP 216 (648) T ss_pred EEEeccCCCc---------ccccceeccccccccccccccccccceeecCccchhhhhccC--ccchhhhhhchhhhhhh Confidence 22111111 122222222222111 0111111111122233 33566778888876321 Q ss_pred eeEEeeecccc-----ccccccccchhhhhhccCCccCcccchhhhhhhcccccccccchhhhhhhhcc----cccccee Q lcl|Aclame:pro 367 NVVRARTKPEF-----EATFTSTLQAAADAKFSGGKDELSLDKEEMYKRLGGEKNEEGFVTKQGAYQYL----ENYEVDY 437 (717) Q Consensus 367 ~~~~a~~~~~~-----~~~l~s~~~~~~~~~ltgG~dG~~~~a~e~~~al~~~~~~~~~v~~~~~~~~l----e~~~vd~ 437 (717) ..++...+.. +..+...... ...++... .....+...+. +++..+..++.+ ++..++. T Consensus 217 -~~~~~~~~~s~~~~~d~~~~~~~~~----a~~~~~~~--~~~~~~~~~~~------gd~~~~~~~~~~~~~~~tp~~~~ 283 (648) T protein:vir:10 217 -TDVVQIFDASDTNPVDIPLGLFVYE----VLYGGLFG--FTKSRLVKTSF------GTVDDLLSNPLLFNLSATPFFDG 283 (648) T ss_pred -hhhheeccccccccccccccccccc----ccchhhhc--CCcchhhhhhh------ccccccccccceecccccccccc Confidence 1112111111 1111100000 00000000 00000000110 011000000000 0000000 Q ss_pred ------------------------------EEecc-ccCCcccccccchhHHHHHHHHHHHhhcccceeEEecCCCcchh Q lcl|Aclame:pro 438 ------------------------------VIPLG-VHADTKLIGKYDDFAYQLALACAVMSHYNSVTIGIIPTTTPSDI 486 (717) Q Consensus 438 ------------------------------vi~~~-~~a~t~~~~~~~~~~~~~a~~~~~~s~~~~~~i~ii~~~~~~~~ 486 (717) ..|.. .+..+.+.++.++. .|..-.... T Consensus 284 ~~~~~~~~~~~~~~~~~v~~~~~~~l~~~~~~p~~~~~~~t~L~GGtdG~---------------------~p~s~~~~~ 342 (648) T protein:vir:10 284 SDYQDYTSLSDPANWFAKDAYTINHLVDTTINPHILATRIFSLSGGTNGD---------------------DGTGYYQTA 342 (648) T ss_pred cceeeeeccccccceeeeeccchhhcccccccCcccccccceecccccCC---------------------Ccccccccc Confidence 00000 00011111111111 000000000 Q ss_pred hHHHHHHHHHHHHhhhhhhhhcccccccccchhhhhccccceeEEEeCcEEEEecccCcceeechhHHHHHHHhcCCccc Q lcl|Aclame:pro 487 SLAGVEEHVKKLENYANEFYMRDRFGNIIFDADRNKIDLGQFIEVVAGPDFIVRNTRLGQMASTPDASYIGMVSQLKTQS 566 (717) Q Consensus 487 ~~a~v~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~v~~p~~~v~~~~~~~~~~~p~ag~vAGl~A~~gv~~ 566 (717) .......|.+.+..+.+.......+.....+.... .+..+.....- +-.++=+...-.... T Consensus 343 ~~~~~~d~~d~l~~~~~~~~~~ivp~~~~~~~~~~-----------------~~~lt~~q~i~--a~a~shv~~~s~~~~ 403 (648) T protein:vir:10 343 VSNYINIWSQGLATLEEEEVNFVIPAYKFTNVTQL-----------------NDRLTIFKGIA--STFLSHVQTMSQVNR 403 (648) T ss_pred cccchhhHHHHhhhccCCCceEEEeeccccccccc-----------------ccccCCccchH--HHHHHHHHHhhhccc Confidence 00022334444444443322111111100000000 00000000000 000000111001111 Q ss_pred ccCCceecccccccccCCHHHHHHHHhCC-cEEEEEE----cCceEEEEeceecCCCCccceeeehhh--------hHHH Q lcl|Aclame:pro 567 APTNKPLPSVTALRYTYSANQLNRLTKAR-FATFKYK----QDGSIGVVDAPTSAHAGSDYTRLSTAR--------IVKE 633 (717) Q Consensus 567 SpaNk~L~gv~~l~~~lt~~e~d~L~~~G-I~~ir~~----~g~G~~v~g~rTt~s~ds~~~~I~vrR--------~~d~ 633 (717) .-+..++.++++....=+..+.+++...+ +++.+.. +..-....+ -+.|.+....| +.-+ T Consensus 404 ~~~r~~~~~~vg~~~~es~~~se~~~~~~~~~~~~a~~~~~d~~~~~~~~-------~~~~~~~~~G~~~~~p~~~~Aa~ 476 (648) T protein:vir:10 404 RKARVGVFGLPAPSPNESVTASEYLYNRNILNTISAMFGGTDRAQAVVFP-------FYSNVFNDEGKVELLGGEFFASY 476 (648) T ss_pred cccccCeEEEeCCCCchhHHHHHHHhhhhcccccceeeeecCCceEEeec-------ccceeECCCCcEEecchhhHHHH Confidence 11222333433322221112223333222 3332210 000000000 11122222222 2222 Q ss_pred HHHHHHH--HHHHhccccCCHHHHHHHHHHHHHHHHHHHhCCceec-----------ceeeeecChhhhhCCEEEEEEEE Q lcl|Aclame:pro 634 AVNAVRE--VADPFIGEPNDTGNRNALTAAVDKRLSKMIENKALLG-----------FDFRLVVTPQQELLGEGSIELSL 700 (717) Q Consensus 634 I~~~I~~--~~~~~IgepN~~~~~~~i~~~I~~fL~~L~~~GaI~G-----------~~~~~~~t~~~i~~G~l~v~i~v 700 (717) +.-.+.. ..+..-|+|..-.....+.+.-..-|++|...|.+.= +++-...+.....++...= .+ T Consensus 477 VAGl~a~l~~~~s~T~k~i~~~~id~~~~~t~~qld~L~~~Gv~~ie~~~~~~~~~~~rvv~gITT~~~~~~~~~~--ei 554 (648) T protein:vir:10 477 VAGMHANREPQDSITFLPISGIGAEPLYNWTYTQKDDLISNRVLFVEKVKTSFGGIVYRIHHNPTTWLGPVTQGFQ--EF 554 (648) T ss_pred HHhhhhccccccCcccceeeccccccccCCCHHHHHHHhcCCcEEEEEecCCcceeeEEEeccceeecCCCCccee--ee Confidence 2111111 0111223332211111112223456788888876431 1110000000000111000 11 Q ss_pred EccccccEEEEEEEEeC Q lcl|Aclame:pro 701 EAPNELRRLTTIVSLSA 717 (717) Q Consensus 701 ~P~~p~e~I~v~i~~ta 717 (717) .-.+-.+|+.-.+.... T Consensus 555 sv~ri~D~l~~~vr~~l 571 (648) T protein:vir:10 555 VLRRIDDFLQSYVYKNL 571 (648) T ss_pred eeeehhhHHHHHHHHHH Confidence 11112222222221111 No 66 >protein:vir:95263 Length: 450 # NCBI annotation: Phage conserved protein # Family: family:all:396 # MgeID: mge:1561 # MgeName: Felix 01 # Cross-refs: genbank:acc:NP_944896;genbank:gi:38707836;genbank:GeneID:2744049 Probab=97.96 E-value=9.2e-06 Score=48.20 Aligned_cols=383 Identities=9% Similarity=0.071 Sum_probs=156.3 Q ss_pred cccceEEEEEecCCceE---E---EEEeee-ccCccceeee------eeeeccccchhHHHH-HHHhhcCcccee-EEee Q lcl|Aclame:pro 308 GVYNDIMRKVESKDGAV---T---VTITKP-ESKRGMISED------PLVFKSGDYTNFKML-VDAINNHPFNNV-VRAR 372 (717) Q Consensus 308 ~~GN~i~I~v~~~~~~~---t---~~lt~~-~~~~~~~~~~------~~~l~~g~~~~~~~l-v~~IN~~~~~~~-~~a~ 372 (717) .|-+-+.|.++...... . ..+.-. ....+.+-+. ...|+.. ...+.. ....++.|.-.. .... T Consensus 1 ~~s~iVnV~i~~~~~a~~~~~f~~~l~~~~~~~~~~r~~~yss~~~V~~~FG~~--S~ey~aA~~yF~q~p~p~~l~igr 78 (450) T protein:vir:95 1 MWNPIVNVDITLNTAGTTREGFGLPLFLASTDNFEERVRGYTSLTEVAEDFDEN--TAAYKAAKQLWSQTPKVTQLYIGR 78 (450) T ss_pred CCCceEEEeecccccccccccceeEEEEcCCCCCccceeeecCHHHHHHhcCCC--cHHHHHHHHHHhCCCcccEEEEEe Confidence 34444444443211111 0 011100 0000111100 0112222 122222 222333332111 1111 Q ss_pred eccccccccccccchhhhhhcc---CCc----cCcccc--------hhhhhhhcccccccccchhhhhhhhcc---cccc Q lcl|Aclame:pro 373 TKPEFEATFTSTLQAAADAKFS---GGK----DELSLD--------KEEMYKRLGGEKNEEGFVTKQGAYQYL---ENYE 434 (717) Q Consensus 373 ~~~~~~~~l~s~~~~~~~~~lt---gG~----dG~~~~--------a~e~~~al~~~~~~~~~v~~~~~~~~l---e~~~ 434 (717) ...+..............-.++ +|. .+.+.. +..+..++... .+... .+..- .... T Consensus 79 ~~~~~t~~~~~~~~~~~~g~lt~tv~G~~~~~~~i~~s~a~s~~~va~~~~tai~~~-----~~~~~-~~~~~s~g~~~~ 152 (450) T protein:vir:95 79 RAMQYTVSIPDAVTESTDYSITVAAGGGISQPYQYTAQSSDTAENVLQQFKTQIEAD-----PTIKD-KVSVNVTGSNGS 152 (450) T ss_pred eccchhhhhhhhhccccceeEEEEecceeeeeeEEEEEecCChhhHHHHhhhhhccc-----ceeee-eeeeeeecccce Confidence 1011000000000000000000 110 000000 00000011000 00000 00000 0000 Q ss_pred ceeEEeccccCCcc---cc---cc---cchhHHHHHHHHHHHhhcccceeEEecCCCcchhhHHHHHHHHHHHHhhhhhh Q lcl|Aclame:pro 435 VDYVIPLGVHADTK---LI---GK---YDDFAYQLALACAVMSHYNSVTIGIIPTTTPSDISLAGVEEHVKKLENYANEF 505 (717) Q Consensus 435 vd~vi~~~~~a~t~---~~---~~---~~~~~~~~a~~~~~~s~~~~~~i~ii~~~~~~~~~~a~v~~~~~~~~~~~~~~ 505 (717) ..+ ......... +. +. ...-.....+.+.........-.+.. .....+...-.+..|++.. ..+| T Consensus 153 ~t~--~~~~~~~~~~~~l~~~~~~~~~~g~~aet~~~a~~a~~~~~~~w~~~~-~~~~~~~~i~a~a~w~~a~---~~~f 226 (450) T protein:vir:95 153 ATM--IIAKAGDNDFVKVTTTAQTVYIASTTADTASTALAAIEAYSTDWYFIA-AEDRTQQFVLAMASEIQAR---KKIF 226 (450) T ss_pred eee--eeeccccchhhccccccceeEecccccccHHHHHHHHHHhhCCeEEEE-ecCCCHHHHHHHHHHHhhc---CcEE Confidence 000 000000000 00 00 00001112222221111111112222 1112222222334444322 1121 Q ss_pred hhccc-ccccc------cchhhhhccccceeEEEeCcEEEEecccCcceeechhHHHHHHHhcCCcc-cccCCceecccc Q lcl|Aclame:pro 506 YMRDR-FGNII------FDADRNKIDLGQFIEVVAGPDFIVRNTRLGQMASTPDASYIGMVSQLKTQ-SAPTNKPLPSVT 577 (717) Q Consensus 506 ~~~d~-~~~~~------~~~~~~~~~~~~~~~v~~p~~~v~~~~~~~~~~~p~ag~vAGl~A~~gv~-~SpaNk~L~gv~ 577 (717) ..... ..... ............| +.-+.++.+.... ..+.+.++|......+. ....+|.++|+. T Consensus 227 ~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~----~~t~~~y~~~~~~---~~~~aa~~g~~~~~~~g~~T~~fk~l~Gv~ 299 (450) T protein:vir:95 227 FTANSDVTALQGTELASANDVPAQLAKNMY----TRTVCLWHHAAAE---DYPEMAYIAYGAPYDAGSIAWGNAQLTGVA 299 (450) T ss_pred EEEcCCchhhhhhhhhcccchHHHHHhccC----CeeEEEeeCCCch---hHHHHHHHHHhhhcccceeeecccccccee Confidence 11000 00000 0000000000000 0111122222111 12456666665544322 234467787775 Q ss_pred cc-----cccCCHHHHHHHHhCCcEEEEEEcCceEEEEeceecCCCCccceeeehhhhHHHHHHHHHHHHHHhc-----c Q lcl|Aclame:pro 578 AL-----RYTYSANQLNRLTKARFATFKYKQDGSIGVVDAPTSAHAGSDYTRLSTARIVKEAVNAVREVADPFI-----G 647 (717) Q Consensus 578 ~l-----~~~lt~~e~d~L~~~GI~~ir~~~g~G~~v~g~rTt~s~ds~~~~I~vrR~~d~I~~~I~~~~~~~I-----g 647 (717) .- ...++..|.+.|.++++|++..+.+.+ .++.++++.+ .+|-.+|-.|++...|+..+..++ + T Consensus 300 ~~v~~~~~~~lt~~~~~al~~~~~n~y~~~~~~~-~~~~G~~~~G-----~~iD~~~~~~wl~~~iq~~l~~ll~~~~~~ 373 (450) T protein:vir:95 300 ASLQPSNQRPLTSIQKSALDVRHCNFIDLDGGVP-VVRRGITSGG-----EWIDIIRGVDWLESDLKTSLRDLLINQKGG 373 (450) T ss_pred eeccCccccccchHHHHHHHhCCcEEEEEecCce-eeeCCeeeCc-----chhHHHHHHHHHHHHHHHHHHHHHHhcCCC Confidence 31 246899999999999999998877654 4778888754 367899999999999998776543 3 Q ss_pred c-cCCHHHHHHHHHHHHHHHHHHHhCCceecceeee----ecChhhhhCCE-EEEEEEEEccccccEEEEEEEEeC Q lcl|Aclame:pro 648 E-PNDTGNRNALTAAVDKRLSKMIENKALLGFDFRL----VVTPQQELLGE-GSIELSLEAPNELRRLTTIVSLSA 717 (717) Q Consensus 648 e-pN~~~~~~~i~~~I~~fL~~L~~~GaI~G~~~~~----~~t~~~i~~G~-l~v~i~v~P~~p~e~I~v~i~~ta 717 (717) | |-++.+...|++.|+.-|++..+.|.|.||.+.. ..+++++.+.+ --+.+.+.....++.+.|+..++= T Consensus 374 KiPy~~~G~~~i~a~i~~~l~~a~~~G~Ia~~~V~~~~~~~~~~~dr~~R~~~~i~~~~~laGAIh~~~i~~~v~~ 449 (450) T protein:vir:95 374 KITYDDTGITRIRQVIETSLQRAVNRNFLSSYTVNVPKASQVALADKKARILKDVTFAGILAGAILDVDLKGTVAY 449 (450) T ss_pred CCccChhhHHHHHHHHHHHHHHHHhcCcccceeEecCChHhcCHHHHhccCCCCeeEEEEEccceEEEEEEEEEEe Confidence 4 7788999999999999999999999999998643 23444555444 347888899999999999999998 No 67 >protein:vir:80052 Length: 331 # NCBI annotation: gp14 # Family: family:all:396 # MgeID: mge:1876 # MgeName: B054 # Cross-refs: genbank:acc:YP_001468718;genbank:gi:157325298;genbank:GeneID:5601743 Probab=97.89 E-value=1.2e-05 Score=47.52 Aligned_cols=280 Identities=11% Similarity=0.045 Sum_probs=135.1 Q ss_pred Ccccchhh-h-hhhc-ccccccccchhhhhhhhccccccceeEEeccccCCcccccccchhH------HHHHHHHHHHhh Q lcl|Aclame:pro 399 ELSLDKEE-M-YKRL-GGEKNEEGFVTKQGAYQYLENYEVDYVIPLGVHADTKLIGKYDDFA------YQLALACAVMSH 469 (717) Q Consensus 399 G~~~~a~e-~-~~al-~~~~~~~~~v~~~~~~~~le~~~vd~vi~~~~~a~t~~~~~~~~~~------~~~a~~~~~~s~ 469 (717) ..+...+- + .... ...+...+.. .++..-.+..+ . .+.+ +.+...++. ...+.+.. . T Consensus 1 ~~~~iv~V~v~~~~~~~~~~~~~~~~---~~~~~~t~~~~--~----~y~s--~~~v~~d~~~~~~~Ykaa~~~f~---Q 66 (331) T protein:vir:80 1 MVETITDVRVHISVLYPSPRIGLGRP---AIFVKGTAMGY--K----EYTT--LEELKDTFADNTEVYAKAKAVFL---Q 66 (331) T ss_pred CccceecceeeecccccccccccCcc---eeEEeccccce--E----EEec--hhhhccCCCCCcHHHHHHHHHHh---c Confidence 11111110 0 0000 0000000000 00000000000 0 0000 000011111 11111111 1 Q ss_pred cccceeEEecCCCcc-----------------------hhhHHHHHHHHHHHHhhhhhhhhcccccccccchhhhhcccc Q lcl|Aclame:pro 470 YNSVTIGIIPTTTPS-----------------------DISLAGVEEHVKKLENYANEFYMRDRFGNIIFDADRNKIDLG 526 (717) Q Consensus 470 ~~~~~i~ii~~~~~~-----------------------~~~~a~v~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 526 (717) ........+...++. +...-.+.+|++.. ...+.... .. ....... .. T Consensus 67 ~~~~~~i~v~~~~~~~~~~a~~a~~~~~w~~~~~~~~~~~~~~a~a~~~~a~---~~~f~~~~-~~---~~~~~~~--~~ 137 (331) T protein:vir:80 67 KDRPDTVAVITYEDTKLLEAAEAYFLKSWHFALLAEFKAADALALSNLIEEQ---KFKFAVFQ-VT---AVADITP--LA 137 (331) T ss_pred cCccceEEEeccchHHHHHHHHHhccCceeEEEeecCCHHHHHHHHHHHhhC---CcEEEEEe-cC---chHHHHH--hh Confidence 111111111111111 11111122222111 11111000 00 0000000 00 Q ss_pred ceeEEEeCcEEEEecccCcceeechhHHHHHHHhcCCccc-ccCCce-ecccccccccCCHHHHHHHHhCCcEEEEEEcC Q lcl|Aclame:pro 527 QFIEVVAGPDFIVRNTRLGQMASTPDASYIGMVSQLKTQS-APTNKP-LPSVTALRYTYSANQLNRLTKARFATFKYKQD 604 (717) Q Consensus 527 ~~~~v~~p~~~v~~~~~~~~~~~p~ag~vAGl~A~~gv~~-SpaNk~-L~gv~~l~~~lt~~e~d~L~~~GI~~ir~~~g 604 (717) .+ .....++.+..+ .. +++.+.|..+...+.. ...+|. |+|+.. ..++..|++.|.++++|++..+.+ T Consensus 138 ~~----~~t~~~~~~~~~---~~-~~aa~~g~~~~~~~g~~t~~fk~~l~GV~~--~~lt~t~~~al~~~~~N~y~~~~~ 207 (331) T protein:vir:80 138 KN----TRTIAIVHSKTG---EK-LDAALIGNVASLPVGSATWKGRHGLAGITS--EELKVSEIDAIQKAGGMCYIEKAG 207 (331) T ss_pred cc----ccEEEEEcCCcc---ch-hHHHHHHHHHhcCccceeeeeecccCCCCC--CCCCHHHHHHHHhcCceEEEEecC Confidence 00 111122222222 11 3455666666666543 234664 777653 468999999999999999998876 Q ss_pred ceEEEEeceecCCCCccceeeehhhhHHHHHHHHHHHHHHhc---cc-cCCHHHHHHHHHHHHHHHHHHHhCCcee---- Q lcl|Aclame:pro 605 GSIGVVDAPTSAHAGSDYTRLSTARIVKEAVNAVREVADPFI---GE-PNDTGNRNALTAAVDKRLSKMIENKALL---- 676 (717) Q Consensus 605 ~G~~v~g~rTt~s~ds~~~~I~vrR~~d~I~~~I~~~~~~~I---ge-pN~~~~~~~i~~~I~~fL~~L~~~GaI~---- 676 (717) . ..+..+.++.+ .+|-.++-.|++...|++.+..++ ++ |-++.+...|++.++.-|++-++.|.|. T Consensus 208 ~-~~~~~G~~~~G-----~~iD~~~~~dWl~~~lq~~l~~ll~~~~kiPy~~~G~~~l~a~i~~~~~~av~~G~I~~g~~ 281 (331) T protein:vir:80 208 I-AQTSEGKTVSG-----EFIDSIHGDDWIKATIETRLQKLLTETDKLTFDARGIALLQSELTTVLNEGFANGIIDSNDE 281 (331) T ss_pred e-eEEecceEeCc-----hhHHHHHHHHHHHHHHHHHHHHHHHhCCCCccChhhHHHHHHHHHHHHHHHHhCCceecCcc Confidence 5 44667777754 268899999999999988765433 33 5678899999999999999999999996 Q ss_pred ----cceee----eecChhhhhCCEE-EEEEEEEccccccEEEEEEEEeC Q lcl|Aclame:pro 677 ----GFDFR----LVVTPQQELLGEG-SIELSLEAPNELRRLTTIVSLSA 717 (717) Q Consensus 677 ----G~~~~----~~~t~~~i~~G~l-~v~i~v~P~~p~e~I~v~i~~ta 717 (717) +|.+. .+.+++++.+++. -+.+.+.+...+++|.|.+.++= T Consensus 282 ~~~~~~~v~~~~~~~~s~~dr~~R~~~~~~~~~~~~gaI~~v~i~~~v~~ 331 (331) T protein:vir:80 282 TGEPNFSITALQRSDLNDDDIAKRNYKGLSFRYKRSGAIHSVDVYGEVEV 331 (331) T ss_pred CCCcceEEEeCchhcCCHHHHhccCCCCeEEEEEEcceEEEEEEEEEEeC Confidence 44432 2456777776664 48888999999999999998888 No 68 >protein:vir:3165 Length: 426 # NCBI annotation: capsid protein CP67 # Family: family:all:28419 # MgeID: mge:316 # MgeName: PhiCh1 # Cross-refs: genbank:acc:NP_665936;genbank:gi:22091122;genbank:GeneID:951267 Probab=97.81 E-value=4.5e-06 Score=49.89 Aligned_cols=379 Identities=10% Similarity=0.022 Sum_probs=147.9 Q ss_pred cccceEEEEEecCCceE-EEEEeeec-cC-cc---------------ceeeeeeeeccccchhHHHHHHH-hhcCcccee Q lcl|Aclame:pro 308 GVYNDIMRKVESKDGAV-TVTITKPE-SK-RG---------------MISEDPLVFKSGDYTNFKMLVDA-INNHPFNNV 368 (717) Q Consensus 308 ~~GN~i~I~v~~~~~~~-t~~lt~~~-~~-~~---------------~~~~~~~~l~~g~~~~~~~lv~~-IN~~~~~~~ 368 (717) .+-|-+.|.|+-..... +..+..+- +. .. .+++...+|+.. ...+..+.+ ..|.+.... T Consensus 1 m~~~iVnV~Is~~t~A~~~~~Fg~~liigs~~~~~p~~~f~~~~~Yss~~~V~~Dfg~~--s~~Y~AA~~~f~Q~~~~~r 78 (426) T protein:vir:31 1 MPKQIVEIELTAEIADRPQETFTDAAIVGTAEEEPPDAEFGEVNQYSTSTSVGDDYGED--SDVYTASEAIEEMGAEQWR 78 (426) T ss_pred CCcceEEEEeecccccccccccceeeeeeeccccccccccchhhhhhhHHHHHhcCCCC--hHHHHHHHHHHhCCceeEE Confidence 33455566664332221 11121110 00 00 000011112111 111121111 222221111 Q ss_pred E---Eee---eccccccccccccchhhhhhccCCccCcccchhhhhhhcccccccccchhhhhhhhccccccceeEEecc Q lcl|Aclame:pro 369 V---RAR---TKPEFEATFTSTLQAAADAKFSGGKDELSLDKEEMYKRLGGEKNEEGFVTKQGAYQYLENYEVDYVIPLG 442 (717) Q Consensus 369 ~---~a~---~~~~~~~~l~s~~~~~~~~~ltgG~dG~~~~a~e~~~al~~~~~~~~~v~~~~~~~~le~~~vd~vi~~~ 442 (717) . ++. .+.. +...+. .....+ |..+....+.++...+.+. +....++..+... T Consensus 79 ~~v~~at~~~~~~~-t~~~tv-----~g~~~s-~~a~~~~~a~~i~~~~~~~---------------~~~~~~~~~~~~~ 136 (426) T protein:vir:31 79 VMVLEATEVTEEEL-SDGDTI-----DKVPIL-GNHEVESPDGDIEFTTDDD---------------PDVEDFDAEIVIN 136 (426) T ss_pred eeccccceeeeccC-Ccceee-----cceeee-ecccCcchHHHHHHhhccc---------------cccccceeeeEec Confidence 1 000 0000 000000 000111 1111222222222222111 1111122111111 Q ss_pred ccCCcccccc--cchhHHHHHHHHHHHhhcccceeEEecCCCcchhhHHHHHHHHHHHHhhhhhhhhcccccccccchhh Q lcl|Aclame:pro 443 VHADTKLIGK--YDDFAYQLALACAVMSHYNSVTIGIIPTTTPSDISLAGVEEHVKKLENYANEFYMRDRFGNIIFDADR 520 (717) Q Consensus 443 ~~a~t~~~~~--~~~~~~~~a~~~~~~s~~~~~~i~ii~~~~~~~~~~a~v~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 520 (717) . .++..... .......-.+|..............++.............++.+..+.-. ...+.....+....... T Consensus 137 t-~~g~~t~~~~~~~~~~s~~dw~~~~~~~s~~~~~~ia~~~~~~~~~~~~~~~~~wa~~~~-i~~va~~~e~~~~~~~~ 214 (426) T protein:vir:31 137 S-ATGDVATSEDSIELTYFHADWSQLDEFPSDVNNFAVADRRFDLKGVGVLDETHSWASDED-MGMIANGVNVDDYDSVD 214 (426) T ss_pred c-ccceeeccccceeeeeccCcchhhhcccccchhhhhhccccchhhhhhhHhhhhhhhhcc-eeeeeeccchhhhcchh Confidence 0 00000000 00000001111110000000000011111111011111111111100000 00000000000000000 Q ss_pred hhccccceeEEEeCcEEEEecccCcceeechhHHHHHHHhcCCcccccCCceecccc---------cccccCCHHHHHHH Q lcl|Aclame:pro 521 NKIDLGQFIEVVAGPDFIVRNTRLGQMASTPDASYIGMVSQLKTQSAPTNKPLPSVT---------ALRYTYSANQLNRL 591 (717) Q Consensus 521 ~~~~~~~~~~v~~p~~~v~~~~~~~~~~~p~ag~vAGl~A~~gv~~SpaNk~L~gv~---------~l~~~lt~~e~d~L 591 (717) ..+....-...+.|....+ ...... .--..++++|.++.+.+|..|....+.+.. ++...+..+++-.+ T Consensus 215 ~~~a~~~~~~~y~p~~~~~-~~~~~~-~~~~~~~~~~~~aa~~~~~~~~~~~~~~~~~~~~~~~~~gv~~t~~~~~~A~~ 292 (426) T protein:vir:31 215 EAMDVAHEVAGYVPSGDLM-MIVDAS-DDDLAAYQLGKFAVSEPWYNPLWNELPAGETVSKNVGDPEEQGTFEGGDEAEG 292 (426) T ss_pred hhhhhhhcccccccchhhe-eehhcc-ccchhhHHhhhhhhhccccchhhhhccccccceeeccccccccccchhhhhhh Confidence 0000000011111111000 000000 000257889999999899888744433322 22333444455555 Q ss_pred HhCCcEEEEEEcCceEEEEeceecCCCCccceeeehhhhHHHHHHHHHHHHHHhc---cc-cCCHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 592 TKARFATFKYKQDGSIGVVDAPTSAHAGSDYTRLSTARIVKEAVNAVREVADPFI---GE-PNDTGNRNALTAAVDKRLS 667 (717) Q Consensus 592 ~~~GI~~ir~~~g~G~~v~g~rTt~s~ds~~~~I~vrR~~d~I~~~I~~~~~~~I---ge-pN~~~~~~~i~~~I~~fL~ 667 (717) + +..|+|+.+.+ +.+++.+.++.+...+-.||-++|..|||...|+..+...+ .| |-++.+...|++.|+.-|+ T Consensus 293 ~-~~~n~~~~~~~-~~~i~~~~~~~G~~~~G~~iD~~~g~dwl~~~iq~~l~~ll~~~~KIpyt~~Gi~~I~~~i~~~L~ 370 (426) T protein:vir:31 293 E-GPVNVLIDVSD-ANRVSNAVTTAGADSDTSFFDIRRTKVYTAEMLELDLESLQVSDDDVPFTEDGQAMIEDAIKGTMS 370 (426) T ss_pred c-CCceEEEEecC-ceeeecceeecccccchhhhhhHHHHHHHHHHHHHHHHHHhhcCCCCccchhHHHHHHHHHHHHHH Confidence 4 67788988765 57888888887777778899999999999999998876543 33 6788999999999999999 Q ss_pred HHHhCCc--eecceeeee---cChhhhhCCEE--EEEEEEEccccccEEEEEEEEeC Q lcl|Aclame:pro 668 KMIENKA--LLGFDFRLV---VTPQQELLGEG--SIELSLEAPNELRRLTTIVSLSA 717 (717) Q Consensus 668 ~L~~~Ga--I~G~~~~~~---~t~~~i~~G~l--~v~i~v~P~~p~e~I~v~i~~ta 717 (717) +.++.|. +.+|.+... ..+.|. ..|. -|.+.......++++.|...++= T Consensus 371 ~~v~~~g~~~~~y~v~~P~~~~~~~dr-a~R~~~~i~~~~~laGAIh~v~I~g~v~v 426 (426) T protein:vir:31 371 GLTGSVGQPLAEYEVDVPEWDDDDVDR-VNRNWGGIDLDARLAQRAHTFSLGLNVSV 426 (426) T ss_pred HHhcCCCccccceeecCCCccccchhh-hhhccCCceEEEEEeCcEEEEEEEEEEeC Confidence 8888644 566764321 111222 2332 26777788899999999988888 No 69 >protein:vir:5260 Length: 502 # NCBI annotation: hypothetical protein # Family: family:all:396 # MgeID: mge:117 # MgeName: Aaphi23 # Cross-refs: genbank:acc:NP_852765;genbank:gi:31544040;uniprot:Q7Y5T5;genbank:GeneID:2753559 Probab=95.73 E-value=0.0016 Score=35.98 Aligned_cols=453 Identities=13% Similarity=0.072 Sum_probs=169.5 Q ss_pred cccceeecCcccceeeccCCcceee---eEEEeecc--e-eecCceeEeccccceeeccccccchhheeecCCccccccc Q lcl|Aclame:pro 122 KLGGAQARGNVAATFTLPNGGIVEA---TFLLKARG--V-IIPPNNYTLDVGTEEDMKAGTQPTFAQVLLNENVADMESE 195 (717) Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (717) |.. =++--|-.++.+...+.-.+ .-|+.... . ++++.+--+.-+...++.. -++.+ T Consensus 1 msi--p~s~ivnV~i~~~~~a~~~~~f~~~l~l~~~~~~~~~~~~~r~~~~~s~~~V~~---------~FG~~------- 62 (502) T protein:vir:52 1 MAL--SISHIVNVQLNTVPKSAARKSFGIVALFTPEAGQAFADEKTRYVYVENQRDVEQ---------LFGTN------- 62 (502) T ss_pred CCC--CccceeEEeeccccccccccccCceEEEeeccCccccCCccceEEecCHHHHHH---------hcCCC------- Confidence 222 11111111222211111111 11111110 0 1111110000000000000 00000 Q ss_pred ceeehhhhhhhhheeeeeeeEeecccccccccCcccCCceEEEEEeeccccc-eeeecCcc--ccc---cchheecccee Q lcl|Aclame:pro 196 ITVSYEFTYKDAQGETKTSEVLDNNTDKDGKPMIAKGADVTIKLEHVALAGL-KLYADGIE--VVD---AKAFTVAGDQL 269 (717) Q Consensus 196 ~~~~~~~~~~~A~~~~~~gelld~~ie~~~~p~~~~~ag~i~a~r~~~a~~a-~~~~~g~~--~~~---s~~~g~~an~i 269 (717) ...|+-|+-.| +.++ . ...++--|-.....+ .++..-++ ..+ ..........+ T Consensus 63 -----s~ey~aA~~yF--------------~q~p-~-P~~l~igR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l 121 (502) T protein:vir:52 63 -----SETAKAAQPFF--------------AQSP-R-AKQLIVARWQKSASTIEATKNTLSGATLSDDLERFKSVVNGRF 121 (502) T ss_pred -----hHHHHHHHHHh--------------cCCC-c-cceEEEEeccccccceeechhhhhhhhhHHhHHHhhhhcCcee Confidence 11222233332 1110 0 111222222222221 22111110 000 00012222333 Q ss_pred EEEEecCccccceEEEEeecccccccccceEEEeeccccccceEEEEEecCCceEEEEEeeeccCccceeeeeeeecc-c Q lcl|Aclame:pro 270 TIHSNSKMKLGASLEAQYAYNLVEVIQPVIELESIFGGGVYNDIMRKVESKDGAVTVTITKPESKRGMISEDPLVFKS-G 348 (717) Q Consensus 270 ~v~l~d~~~t~~~l~v~~a~~~~~~~~d~i~l~a~~~G~~GN~i~I~v~~~~~~~t~~lt~~~~~~~~~~~~~~~l~~-g 348 (717) +|.+....++-..|.++.+....+.. . .|++.. +..++...+.+....... .++-.....+......+.... . T Consensus 122 ~i~i~g~~~t~~~i~lS~~ts~~~vA-~--~i~~~l-~~~~~~~tv~~d~~~~~F--~i~s~ttg~~~~~~~~~a~~~~~ 195 (502) T protein:vir:52 122 SLTIGGDVKKVDGLSFARLADFNAVA-T--KIQEKL-TTLSVAVSIAYDETGNRF--IVSANVAGEDKKTEIDYAIDEGG 195 (502) T ss_pred EEEecceeeeeeccccccccchhHHH-H--HHHhhh-cccccceEEEEecCCceE--EEEeccCCCcceeEEEEeecCCc Confidence 33332222222222222221110000 0 111111 111222333333332222 121111111100000000000 0 Q ss_pred cchhHHHHHHHhhcCccceeEEeeeccccccccccccchhhhhhccCCccCcccchhhhhhhcccccccccchhhhhhhh Q lcl|Aclame:pro 349 DYTNFKMLVDAINNHPFNNVVRARTKPEFEATFTSTLQAAADAKFSGGKDELSLDKEEMYKRLGGEKNEEGFVTKQGAYQ 428 (717) Q Consensus 349 ~~~~~~~lv~~IN~~~~~~~~~a~~~~~~~~~l~s~~~~~~~~~ltgG~dG~~~~a~e~~~al~~~~~~~~~v~~~~~~~ 428 (717) ++..++.+... .+.+ ...... ....|.. +..+.+++..... T Consensus 196 ~gt~~a~~l~l-~~~~--------------~av~v~-------~~~~g~~-----aet~~~al~a~~~------------ 236 (502) T protein:vir:52 196 EGEYIGALLKL-ENGQ--------------ASRKVG-------KNSVSLK-----KETLGEALFNVAE------------ 236 (502) T ss_pred chhHHHHHhcc-cccc--------------ceeeee-------eeccccc-----ccCHHHHHHHHHh------------ Confidence 01111111000 0000 000000 0000000 0001111100000 Q ss_pred ccccccce-eEEeccccCCcccccccchhHHHHHHHHHHHhhcccceeEEecCCCcchhhHHHHHHHHHHHHhhhhhhhh Q lcl|Aclame:pro 429 YLENYEVD-YVIPLGVHADTKLIGKYDDFAYQLALACAVMSHYNSVTIGIIPTTTPSDISLAGVEEHVKKLENYANEFYM 507 (717) Q Consensus 429 ~le~~~vd-~vi~~~~~a~t~~~~~~~~~~~~~a~~~~~~s~~~~~~i~ii~~~~~~~~~~a~v~~~~~~~~~~~~~~~~ 507 (717) .+.+.- +++.. ...++...+++.|+.... ...+.....+.. ..........++.. T Consensus 237 --~~~~w~~~~~a~---------~~~~~~~la~a~~iea~~----~~f~~~~~d~~~--~~~~~~~i~~~l~a------- 292 (502) T protein:vir:52 237 --VNNTWYGFTVAA---------QLTDSEVEAAAKYAQANT----KLFGANVIRAEQ--IEWSADNIYKKLYD------- 292 (502) T ss_pred --ccCceEEEEEee---------cCChhHHHHHHHHHhhcC----cEEEEEecCcce--eccccchHHHHHHh------- Confidence 001111 11111 111223455666655321 112221111100 00000000111100 Q ss_pred cccccccccchhhhhccccceeEEEeCcEEEEecccCcceeechhHHHHHHHhcCCccccc-----CCceeccccccccc Q lcl|Aclame:pro 508 RDRFGNIIFDADRNKIDLGQFIEVVAGPDFIVRNTRLGQMASTPDASYIGMVSQLKTQSAP-----TNKPLPSVTALRYT 582 (717) Q Consensus 508 ~d~~~~~~~~~~~~~~~~~~~~~v~~p~~~v~~~~~~~~~~~p~ag~vAGl~A~~gv~~Sp-----aNk~L~gv~~l~~~ 582 (717) ..|. .-+.++++.. ..+.+.+.|..+...+...+ .+|.++|+. ... T Consensus 293 ------------------~~~~----~t~~~y~~~~-----~~~~aa~~g~~as~~f~~~~g~iT~~fk~l~GV~--~~~ 343 (502) T protein:vir:52 293 ------------------AGLD----HTLAMFDKND-----MYPVSSALARLLSTNFAANNSTLTLKFKQQPTIT--ADE 343 (502) T ss_pred ------------------ccCc----eeEEEecCCc-----chhHHHHHHHHHhcCCCcCcceeeecccccCCcc--cCc Confidence 0110 0111222211 12455667777777654433 467788775 346 Q ss_pred CCHHHHHHHHhCCcEEEEEEcCceEEEEeceecCCCCccceeeehhhhHHHHHHHHHHHHHHhc----cc-cCCHHHHHH Q lcl|Aclame:pro 583 YSANQLNRLTKARFATFKYKQDGSIGVVDAPTSAHAGSDYTRLSTARIVKEAVNAVREVADPFI----GE-PNDTGNRNA 657 (717) Q Consensus 583 lt~~e~d~L~~~GI~~ir~~~g~G~~v~g~rTt~s~ds~~~~I~vrR~~d~I~~~I~~~~~~~I----ge-pN~~~~~~~ 657 (717) ++..|++.|.++++|++..+.+.+ .+..++++.+ .+|-.++-.|++...|+..+..++ ++ |-++..... T Consensus 344 lt~t~~~al~~~~~N~y~~~~~~~-~~~~G~~~~G-----~~iD~~~~~~Wl~~~lq~~l~~~L~~s~~kIPy~~~G~~~ 417 (502) T protein:vir:52 344 ITATEFAKAKRLGINVYTYFDDVA-MIAEGTVIGG-----KFADEIVILDWFVDAVQKEVFARLYKSPTKIPLTDKGQAI 417 (502) T ss_pred CCHHHHHHHHhcCceEEEEecCee-EEecCeeeCC-----chhhHHHHHHHHHHHHHHHHHHHHHhcCCCcccChhHHHH Confidence 899999999999999998886654 4567777754 267788888999999988765433 23 678899999 Q ss_pred HHHHHHHHHHHHHhCCcee--------------------cceee----eecChhhhhCCEE-EEEEEEEccccccEEEEE Q lcl|Aclame:pro 658 LTAAVDKRLSKMIENKALL--------------------GFDFR----LVVTPQQELLGEG-SIELSLEAPNELRRLTTI 712 (717) Q Consensus 658 i~~~I~~fL~~L~~~GaI~--------------------G~~~~----~~~t~~~i~~G~l-~v~i~v~P~~p~e~I~v~ 712 (717) |++.|+.-|++-++.|.|. ||.+. ...++.++.+.+. -+.+.+.+...+++|.|. T Consensus 418 l~a~i~~~l~~a~~~G~I~~G~~~~~~~g~~~~~d~~~~gy~v~~~~~~~~s~~dr~~R~~~~~~~~~~~aGaIh~v~i~ 497 (502) T protein:vir:52 418 LIAAVEKVCLEGINNGAFAPGKWTGAGFGNLSTGDYLDKGFYVWAAPMDTLSDSDRQARRATPIQTAVKLAGAIHSSDVI 497 (502) T ss_pred HHHHHHHHHHHHHhcCccccccccCcccceeeecccccCceEEEeCchhhCCHHHHHcccCCCeEEEEEECceEEEEEEE Confidence 9999999999999999995 33322 2345666666554 789999999999999998 Q ss_pred EEEeC Q lcl|Aclame:pro 713 VSLSA 717 (717) Q Consensus 713 i~~ta 717 (717) +.+-= T Consensus 498 ~nv~~ 502 (502) T protein:vir:52 498 VNYNR 502 (502) T ss_pred EEEeC Confidence 77777 No 70 >protein:vir:94073 Length: 494 # NCBI annotation: hypothetical protein # Family: family:all:396 # MgeID: mge:1493 # MgeName: OP2 # Cross-refs: genbank:acc:YP_453619;genbank:gi:84662655;genbank:GeneID:5142583 Probab=40.85 E-value=0.95 Score=20.70 Aligned_cols=421 Identities=11% Similarity=0.039 Sum_probs=137.3 Q ss_pred CcccCCceEEEEEeeccccc--eeeecCcccccc-------------------chheeccceeEEEEecCc----cccce Q lcl|Aclame:pro 228 MIAKGADVTIKLEHVALAGL--KLYADGIEVVDA-------------------KAFTVAGDQLTIHSNSKM----KLGAS 282 (717) Q Consensus 228 ~~~~~ag~i~a~r~~~a~~a--~~~~~g~~~~~s-------------------~~~g~~an~i~v~l~d~~----~t~~~ 282 (717) |....-..|+-+...=+.++ ..-.+++ +++. ..||.+.-..+-+..... -+-+. T Consensus 1 m~~ip~s~iV~V~~~v~~~~~~~~~f~~~-l~~~~~~~~~~r~~~y~s~~~V~~~FG~~S~ey~aA~~yFs~~~~q~p~P 79 (494) T protein:vir:94 1 MPNIPISQIVSINPQVVSAGGTQGTLDGL-LLTQATGFPVTQPQVYFSAADVGTAFGLTSDEYNAALVYFAGILGGGQQP 79 (494) T ss_pred CCCCCcccEEEeeeeccccCCccccccee-EeecCccCCccceeeecCHHHHHHhcCCChHHHHHHHHHhhhccCCCccc Confidence 33333333333322211111 1111111 1111 112222111111100000 00011 Q ss_pred EEEEeecccccccccceEEEeeccccccceEEEEE---ecCCceEEEEEeeeccCccceeeeeeeeccccchhHHHHHHH Q lcl|Aclame:pro 283 LEAQYAYNLVEVIQPVIELESIFGGGVYNDIMRKV---ESKDGAVTVTITKPESKRGMISEDPLVFKSGDYTNFKMLVDA 359 (717) Q Consensus 283 l~v~~a~~~~~~~~d~i~l~a~~~G~~GN~i~I~v---~~~~~~~t~~lt~~~~~~~~~~~~~~~l~~g~~~~~~~lv~~ 359 (717) -++.++.+.+...-. . | .|-.+..++ +.-+ .+.+++... ........|.. .+++...++. T Consensus 80 ~~l~igR~~~~a~~~-~-l-------~g~~~~~tl~~~~~~~--g~l~iti~g----~~~~~~i~lS~--~ts~~~vA~~ 142 (494) T protein:vir:94 80 ASLTIGRYASAATSA-A-V-------FGAPLTLSLAQLQTLS--GTLIVTTDT----QRTSAAINLSG--ATSFANAASL 142 (494) T ss_pred cEEEEEeecCccccc-e-e-------eccchhhhHHhhhhcc--eEEEEEEcc----eEEEeeecccc--cCChhhHHHH Confidence 122222221111100 0 0 000000000 1111 112222211 01111111111 1223333333 Q ss_pred hhcCccceeEEeeeccccccccccccchhhhhhccCCccCcccchhhhhhhcccccccccchhhhhhhhccccccceeEE Q lcl|Aclame:pro 360 INNHPFNNVVRARTKPEFEATFTSTLQAAADAKFSGGKDELSLDKEEMYKRLGGEKNEEGFVTKQGAYQYLENYEVDYVI 439 (717) Q Consensus 360 IN~~~~~~~~~a~~~~~~~~~l~s~~~~~~~~~ltgG~dG~~~~a~e~~~al~~~~~~~~~v~~~~~~~~le~~~vd~vi 439 (717) |+.......... ..+.....+ .... .-+|........+..+...+. |.+..-..+. T Consensus 143 i~~ai~~a~~~v-~~d~~~~~f----~v~s--~ttG~~s~is~~t~~~a~~l~-----------------lt~~~~a~v~ 198 (494) T protein:vir:94 143 MTSGFTTPNFAI-TYDAQRRRF----VLST--TATGTTASVSAVTGTLADGVG-----------------LSTASGAYVE 198 (494) T ss_pred HhhhhccccceE-EEcccCcEE----EEEE--ccCCceeEEEEeccchhhhhh-----------------hhccccceEe Confidence 332211100000 010000000 0000 000110000000000100000 0000000000 Q ss_pred eccccCCcccccccchhHHHHHHHHHHHhhcccceeEEecCCCcchhhHHHHHHHHHHHHhhhhhhhhccccccccc--- Q lcl|Aclame:pro 440 PLGVHADTKLIGKYDDFAYQLALACAVMSHYNSVTIGIIPTTTPSDISLAGVEEHVKKLENYANEFYMRDRFGNIIF--- 516 (717) Q Consensus 440 ~~~~~a~t~~~~~~~~~~~~~a~~~~~~s~~~~~~i~ii~~~~~~~~~~a~v~~~~~~~~~~~~~~~~~d~~~~~~~--- 516 (717) ..+..+ +.....+. .|.. ...+.-...+.. ...+...-.+..|++...+. -.+..++.-..... T Consensus 199 ~~g~~a--------et~~~a~~-a~~~--~~~~Wy~f~~~~-~~~~~~ilalA~wiea~~~~-~~~~~~~~d~~~~~~~~ 265 (494) T protein:vir:94 199 GSGLAA--------DTAASALD-RLAA--SSSTWAIFTTAW-AASLSDRTALAQWTSDQVFR-RIYAAWDQDAAGLSVNN 265 (494) T ss_pred ecCccc--------ccHHHHHH-HHHh--ccCceEEEEEec-CCCHHHHHHHHHHHhhcCcc-EEEEEecCCcceeeccc Confidence 000000 00111111 1111 111111111111 11122222233333322110 01111111000000 Q ss_pred -chhhhhccccceeEEEeCcEEEEecccCcceeechhHHHHHHHhcCCcccccCCceec--c-ccccccc-CCHHHHHHH Q lcl|Aclame:pro 517 -DADRNKIDLGQFIEVVAGPDFIVRNTRLGQMASTPDASYIGMVSQLKTQSAPTNKPLP--S-VTALRYT-YSANQLNRL 591 (717) Q Consensus 517 -~~~~~~~~~~~~~~v~~p~~~v~~~~~~~~~~~p~ag~vAGl~A~~gv~~SpaNk~L~--g-v~~l~~~-lt~~e~d~L 591 (717) ++-........| .+..+..+. ..+.+.+.|..+...+...+.+..+. . ..++..+ ++..|.+.| T Consensus 266 ~~~i~~~l~~~~y-----~~t~~~y~~------~~~~aa~~g~~aa~~~~~~~g~~T~~~k~q~~gi~~~~l~~t~a~al 334 (494) T protein:vir:94 266 VSSFGNIVKTTPF-----SNTIPVYGL------LANAMIVLAWGASTNLQIAEGRTTLALRSPVSSAGVRVDNLANANAL 334 (494) T ss_pred chhHHHHHHhhcC-----CceEEEcCC------CChHHHHHHHHHhccccccCcceeEEeeccCCCCCCccCCHHHHHHH Confidence 000001100111 111111111 11345667777877776665544332 1 2344444 688999999 Q ss_pred HhCCcEEEEEEcCc--eEEEEeceecCCCCccceeeehhhhHHHHHHHHHHHHHHhc---cc-cCCHHHHHHHHHHHHHH Q lcl|Aclame:pro 592 TKARFATFKYKQDG--SIGVVDAPTSAHAGSDYTRLSTARIVKEAVNAVREVADPFI---GE-PNDTGNRNALTAAVDKR 665 (717) Q Consensus 592 ~~~GI~~ir~~~g~--G~~v~g~rTt~s~ds~~~~I~vrR~~d~I~~~I~~~~~~~I---ge-pN~~~~~~~i~~~I~~f 665 (717) .++|+|++..+.+. -+.+|.+.++.+ +|..|-..+=.+++...|+..+..++ ++ |-++.....|++.|+.- T Consensus 335 ~~~~~N~y~~~~~~~~~~~~~~gg~~sG---~~~~id~~~~~~WL~~~iq~~l~~ll~~~~KIPytd~G~~~l~a~i~~~ 411 (494) T protein:vir:94 335 LSNGYTYLGKYASATNTYTVTYNGAIGG---QFLWADTALGWIALRRNLQQALFETLLAYRSLPYNADGYNALYQGAQDV 411 (494) T ss_pred HhcCCeEEEEecccCceEEEecCceecc---ccceeeeeccHHHHHHHHHHHHHHHHHhCCCcccChhhHHHHHHHHHHH Confidence 99999999888643 477887777643 34444444444566666665543322 44 77899999999999999 Q ss_pred HHHHHhCCceecce-e---------------------------e--eecChhhhhC-CEEEEEEEEEccccccEEEEEEE Q lcl|Aclame:pro 666 LSKMIENKALLGFD-F---------------------------R--LVVTPQQELL-GEGSIELSLEAPNELRRLTTIVS 714 (717) Q Consensus 666 L~~L~~~GaI~G~~-~---------------------------~--~~~t~~~i~~-G~l~v~i~v~P~~p~e~I~v~i~ 714 (717) |++-+++|.|.-.. . . ...++++..+ ..-.+.+...-...+++|.+..+ T Consensus 412 l~~av~nG~I~~Gv~~~~~q~~~i~~~~G~~~~~~~~~kGyy~~~~~~~s~~~ra~R~~~~~~~~y~~~GAIh~v~i~~~ 491 (494) T protein:vir:94 412 VSQFVAAGVIRAGVALSASQRAQIDQAAGVPISGDVVDKGWYLQVIDPITTTVRTDRGSPTVNFWYCDGGSIQRVVVSAT 491 (494) T ss_pred HHHHHhCceeecccccCcchhhhhhhhhcCccccceeccceeeeccCCCChhhhhccccCCceEEEEecCcEEEEEEeeE Confidence 99999999996321 0 0 0122222111 11122222333445555444332 Q ss_pred EeC Q lcl|Aclame:pro 715 LSA 717 (717) Q Consensus 715 ~ta 717 (717) .== T Consensus 492 ~v~ 494 (494) T protein:vir:94 492 TVI 494 (494) T ss_pred EeC Confidence 222 No 71 >protein:vir:106730 Length: 501 # NCBI annotation: gp04 # Family: family:all:396 # MgeID: mge:1599 # MgeName: Bcep1 # Cross-refs: genbank:acc:NP_944312;genbank:gi:38638611;genbank:GeneID:2657359 Probab=37.73 E-value=1.1 Score=20.35 Aligned_cols=415 Identities=11% Similarity=0.042 Sum_probs=145.6 Q ss_pred cccccccceeehhhhhhhhheeeeeeeEeecccccccccCcccCCceEEEEEeecccc--ceeeecCccccccchheecc Q lcl|Aclame:pro 189 VADMESEITVSYEFTYKDAQGETKTSEVLDNNTDKDGKPMIAKGADVTIKLEHVALAG--LKLYADGIEVVDAKAFTVAG 266 (717) Q Consensus 189 ~~~~~~~~~~~~~~~~~~A~~~~~~gelld~~ie~~~~p~~~~~ag~i~a~r~~~a~~--a~~~~~g~~~~~s~~~g~~a 266 (717) |+.-+ ..-..|+-+...=..+ +..-..|+ +|+.... ... T Consensus 1 m~~~~-------------------------------------ip~s~iV~V~~~v~~~~~~~~~f~~l-ll~~~~~-~~~ 41 (501) T protein:vir:10 1 MPTTT-------------------------------------IPIDQIVQMLPGVIGAGGAPGRLTGL-VLTQDTS-VQP 41 (501) T ss_pred CCcCc-------------------------------------cccceEEEEeeecccCCCcccccceE-EEecccC-CCc Confidence 11111 2223333332211111 11222222 2221111 122 Q ss_pred ceeEEEE-----ecCccc-------------------cceEEEEeecccccccccceEEEeeccccccceEEEEEecCCc Q lcl|Aclame:pro 267 DQLTIHS-----NSKMKL-------------------GASLEAQYAYNLVEVIQPVIELESIFGGGVYNDIMRKVESKDG 322 (717) Q Consensus 267 n~i~v~l-----~d~~~t-------------------~~~l~v~~a~~~~~~~~d~i~l~a~~~G~~GN~i~I~v~~~~~ 322 (717) +.++... .+.+.+ -+.-++.++.+.++..-. .-.+....+.. +. ..+.-++ T Consensus 42 ~r~~~y~s~~~V~~~FG~~S~ey~aA~~yFsg~~~q~p~P~~l~igR~~~~~~~~-~l~g~~l~~~~---la-~~~~~~g 116 (501) T protein:vir:10 42 GQLADFFQKTDVENWFGALSNEAKIADAYFPGIVNGGQLPYDLKFARYVAADAPA-SVYGIPLTGIT---LA-QLQGYSG 116 (501) T ss_pred cceeeecCHHHHHHhcCCChHHHHHHHHHhhhhcCCCccccEEEEEeecccCccc-eeeeceehhhh---hh-hhhheee Confidence 2222210 011111 111222222222111100 00000000000 00 0001111 Q ss_pred eEEEEEeeeccCccceeeeeeeeccccchhHHHHHHHhhcCccc-eeEEeeeccccccccccccchhhhhhccCCccCcc Q lcl|Aclame:pro 323 AVTVTITKPESKRGMISEDPLVFKSGDYTNFKMLVDAINNHPFN-NVVRARTKPEFEATFTSTLQAAADAKFSGGKDELS 401 (717) Q Consensus 323 ~~t~~lt~~~~~~~~~~~~~~~l~~g~~~~~~~lv~~IN~~~~~-~~~~a~~~~~~~~~l~s~~~~~~~~~ltgG~dG~~ 401 (717) +.+|+... .. ......+.. .++....++.|+..... .+... .+.....+ .++.-..|.. T Consensus 117 --~l~i~i~g--~~--~~~~i~~s~--ats~~~vA~~i~~al~~~~~tv~--~d~~~~~f----------~i~~~t~G~~ 176 (501) T protein:vir:10 117 --TLTVTTAA--QH--VSANISLAA--ATSFANAATLIEAAFTSPDFVVA--YDALRNRF----------TVVTNTTGTA 176 (501) T ss_pred --EEEEeecc--ce--eeecccccc--ccCHHHHHHHHHHhhcCCceEEE--EecccceE----------EEEecccCcc Confidence 22222111 10 111122211 12333333333332211 01101 00000000 0000001110 Q ss_pred cc---h---hhhhhhcccccccccchhhhhhhhccccccceeEEeccccCCcccccccchhHHHHHHHHHHHhhccccee Q lcl|Aclame:pro 402 LD---K---EEMYKRLGGEKNEEGFVTKQGAYQYLENYEVDYVIPLGVHADTKLIGKYDDFAYQLALACAVMSHYNSVTI 475 (717) Q Consensus 402 ~~---a---~e~~~al~~~~~~~~~v~~~~~~~~le~~~vd~vi~~~~~a~t~~~~~~~~~~~~~a~~~~~~s~~~~~~i 475 (717) .. + .++...++ |..-.-..+...+..++ ....++. .|... ..+.-. T Consensus 177 ~~i~~~t~~~d~a~~l~-----------------Lt~~~~a~v~~~g~~ae--------t~~~Al~-a~~~~--~~~Wy~ 228 (501) T protein:vir:10 177 AAISAVTGTNNLADELG-----------------LSAAAGATLQAAGVAAD--------TPASAMN-RAVGL--SRNWAT 228 (501) T ss_pred eeEEEeeccccchhhhc-----------------ccccCceeEEecCcccc--------cHHHHHH-HHHhc--ccceEE Confidence 00 0 00100000 00000000000000000 0011111 11111 111111 Q ss_pred EEecCCCcchhhHHHHHHHHHHHHhhhhhh--hhccccccccc----chhhhhccccceeEEEeCcEEEEecccCcceee Q lcl|Aclame:pro 476 GIIPTTTPSDISLAGVEEHVKKLENYANEF--YMRDRFGNIIF----DADRNKIDLGQFIEVVAGPDFIVRNTRLGQMAS 549 (717) Q Consensus 476 ~ii~~~~~~~~~~a~v~~~~~~~~~~~~~~--~~~d~~~~~~~----~~~~~~~~~~~~~~v~~p~~~v~~~~~~~~~~~ 549 (717) ..+- ....+...-.+..|++.. ..+| ...+....... ++-........|... +.+|++ . T Consensus 229 f~~a-~~~~~~~~la~A~wi~a~---~~~f~~~~~~~~~~~~~~~~~~~i~~~l~~~~y~~t----~~~y~~-------~ 293 (501) T protein:vir:10 229 FTTA-WTAVIADRLAFAAWNSGQ---AYKYMYVAPDLEAASIVTNNAASFGAQVFAAPYQGT----LPLYGD-------Q 293 (501) T ss_pred EEEE-ecCChHHHHHHHHHHHhc---CceEEEEEecCcceeeecccchhHHHHHHhcCCCce----EEECCC-------C Confidence 1111 112222222233333321 1111 11111000000 000001111111110 111111 2 Q ss_pred chhHHHHHHHhcCCcccccC-----Ccee-cccccccccCCHHHHHHHHhCCcEEEEEEcCce--EEEEeceecCCCCcc Q lcl|Aclame:pro 550 TPDASYIGMVSQLKTQSAPT-----NKPL-PSVTALRYTYSANQLNRLTKARFATFKYKQDGS--IGVVDAPTSAHAGSD 621 (717) Q Consensus 550 p~ag~vAGl~A~~gv~~Spa-----Nk~L-~gv~~l~~~lt~~e~d~L~~~GI~~ir~~~g~G--~~v~g~rTt~s~ds~ 621 (717) .+++.+.|..+...+...+. +|.+ .|+. ...++..|.+.|.++|+|++..+.+.+ +.+|..-++.+ + T Consensus 294 ~~~aa~~g~~as~nf~~~~g~~T~~fkql~~Gv~--a~~l~~t~a~al~~~~~N~y~~~~~~~~~~~~~~~G~~sG---~ 368 (501) T protein:vir:10 294 ATAGAVMGYAASINFQLRNGRTVLAFRQFNAGVP--ATAHDLPTANALRSNNYTYIGAYANAANNYTIAYDGKLSG---K 368 (501) T ss_pred CHHHHHHHHHHhcCcccCcceeeeeecccCCCcC--cccCCHHHHHHHHhcCCeEEEEEecccceeeEEEcceeec---c Confidence 25566777777776655443 4444 2332 235889999999999999998887644 77775544533 4 Q ss_pred ceeeehhhhHHHHHHHHHHHHHHhc---cc-cCCHHHHHHHHHHHHHHHHHHHhCCceecce-e------ee-------- Q lcl|Aclame:pro 622 YTRLSTARIVKEAVNAVREVADPFI---GE-PNDTGNRNALTAAVDKRLSKMIENKALLGFD-F------RL-------- 682 (717) Q Consensus 622 ~~~I~vrR~~d~I~~~I~~~~~~~I---ge-pN~~~~~~~i~~~I~~fL~~L~~~GaI~G~~-~------~~-------- 682 (717) |.+|.+.+-.|++...|+..+...+ ++ |-++.+...|++.|+.-|++-+++|.|.-.. . .+ T Consensus 369 ~~wiD~~~g~dWl~~~iq~~l~~ll~~~~kIPyt~~G~~~l~a~i~~~l~~av~nG~Ia~Gv~l~~~q~~~i~~~~g~~~ 448 (501) T protein:vir:10 369 FLWVDTYLDQIYLNAELQRAEFEAMLAYNSLPYNEDGYTANYRAGVDVIDAAVTSGIIRAGVTLTNSQLQQIDAVAGVAG 448 (501) T ss_pred ceehhhHhhHHHHHHHHHHHHHHHHhcCCCcccCHHHHHHHHHHHHHHHHHHHhCcceecCcccCcccceeecccccccc Confidence 7788899999999999987765433 33 6788999999999999999999999996321 0 00 Q ss_pred -----------------ecChhhhh-CCEEEEEEEEEccccccEEEEEEEEeC Q lcl|Aclame:pro 683 -----------------VVTPQQEL-LGEGSIELSLEAPNELRRLTTIVSLSA 717 (717) Q Consensus 683 -----------------~~t~~~i~-~G~l~v~i~v~P~~p~e~I~v~i~~ta 717 (717) ..++++.. +....+.+.+.--..+++|.+ ..+. T Consensus 449 ~~~~v~~~Gyy~~~~~~~~~~~~R~~R~~p~~~~~y~~~gaIh~v~i--~s~~ 499 (501) T protein:vir:10 449 AGALVQTRGWYFLIGNPANPGQARQNRTSPACTLWYSDGGSIQELTI--GSNA 499 (501) T ss_pred cccceeccceEEeeCcccCChhhhhhcccCceEEEEEeCCceeEEEe--eeee Confidence 01112211 122444555555556666544 2222 No 72 >protein:vir:99586 Length: 507 # NCBI annotation: hypothetical protein # Family: family:all:396 # MgeID: mge:1544 # MgeName: BcepF1 # Cross-refs: genbank:acc:YP_001039795;genbank:gi:126011045;genbank:GeneID:4818281 Probab=36.09 E-value=1.2 Score=20.16 Aligned_cols=448 Identities=11% Similarity=0.054 Sum_probs=162.1 Q ss_pred cccceeecCcccceeeccCCcceee---eEEEeecceeecCceeEeccccceeeccccccchhheeecCCccccccccee Q lcl|Aclame:pro 122 KLGGAQARGNVAATFTLPNGGIVEA---TFLLKARGVIIPPNNYTLDVGTEEDMKAGTQPTFAQVLLNENVADMESEITV 198 (717) Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (717) |++ ++--|-.++.+...+...+ .-|+......+|...+ T Consensus 1 mip---~s~iVnV~~~v~~~a~~~~~~~~~lilt~~~~~~~~r~------------------------------------ 41 (507) T protein:vir:99 1 MIS---QSRYVRIVSGVGAGAPVAQRRLIMRVMTTNAVLPPGVV------------------------------------ 41 (507) T ss_pred CCC---ccceeEEeeeccccCcccccccceeeeccccCCCccce------------------------------------ Confidence 443 2212223333332222211 1122222111111100 Q ss_pred ehhhhhhhhhee---eeee-eEeecccccccccC--cccCCceEEEEEeeccccceeeecC-ccccccchheeccceeEE Q lcl|Aclame:pro 199 SYEFTYKDAQGE---TKTS-EVLDNNTDKDGKPM--IAKGADVTIKLEHVALAGLKLYADG-IEVVDAKAFTVAGDQLTI 271 (717) Q Consensus 199 ~~~~~~~~A~~~---~~~g-elld~~ie~~~~p~--~~~~ag~i~a~r~~~a~~a~~~~~g-~~~~~s~~~g~~an~i~v 271 (717) ..|..++.+ |... +...+ ...-|+.. .....+.++--|-..+.-+....++ +.-.....-......++| T Consensus 42 ---~~y~s~~~V~~~FG~~S~ey~a-A~~yFsq~p~~~~~P~~L~igR~~~~~~~a~l~g~~~~~~l~~~~~~~~G~lti 117 (507) T protein:vir:99 42 ---FESSSADAVGAYFGMASEEYKR-AKAYMSFISKSINSPSYISFARWVNAAIASMIVGDSLVKNLPALKAVATPTLSL 117 (507) T ss_pred ---EeecCHHHHHHhcCCChHHHHH-HHHHhccCCCCCcccceEEEEeecCccccceeecchhhhhHHHHhhhcceeEEE Confidence 011111110 1100 11111 12223321 1111223333333322222222222 110000011112223444 Q ss_pred EEecCccccceEEEEeeccccccc---ccceEEEeec-cccccceEEEEEecCCceEEEEEeeeccCccceeeeeeeecc Q lcl|Aclame:pro 272 HSNSKMKLGASLEAQYAYNLVEVI---QPVIELESIF-GGGVYNDIMRKVESKDGAVTVTITKPESKRGMISEDPLVFKS 347 (717) Q Consensus 272 ~l~d~~~t~~~l~v~~a~~~~~~~---~d~i~l~a~~-~G~~GN~i~I~v~~~~~~~t~~lt~~~~~~~~~~~~~~~l~~ 347 (717) .+.-..++-+.+.++.+....+.. +. .|++.. +... ...+.+........++.+ +... .....+.... T Consensus 118 ~v~G~~~t~~~i~lS~~ts~~~vAs~i~~--~l~a~~~~~~~--~~tv~~d~~~~~F~v~s~--~tG~--~s~i~~at~~ 189 (507) T protein:vir:99 118 SIGGTVVPIAGIDLTAALTLTDVAATLQT--KIRASANAELA--TATVTFNTTTNQFVLNGT--TTGA--LAPTITAVRT 189 (507) T ss_pred EEcCceeEeccccccccCCHHHHHHHHHH--hhhcccccccc--ceEEEEecCCceEEEEee--eccc--cceeEEEEcC Confidence 432222222222222221111100 01 111100 0000 011112111111111111 1000 0000111111 Q ss_pred ccchhHHHHHHHhhcCccceeEEeeeccccccccccccchhhhhhccCCccCcccchhhhhhhcccccccccchhhhhhh Q lcl|Aclame:pro 348 GDYTNFKMLVDAINNHPFNNVVRARTKPEFEATFTSTLQAAADAKFSGGKDELSLDKEEMYKRLGGEKNEEGFVTKQGAY 427 (717) Q Consensus 348 g~~~~~~~lv~~IN~~~~~~~~~a~~~~~~~~~l~s~~~~~~~~~ltgG~dG~~~~a~e~~~al~~~~~~~~~v~~~~~~ 427 (717) +..+.+..|.. .+. +. .....|.+.. +..+....+.....+++.. T Consensus 190 ~~gt~~s~l~~-~~~-~~-------------------------a~~~~g~~ae--t~~~a~~a~~~~~~nW~~~------ 234 (507) T protein:vir:99 190 DPATDISSLLG-WTN-TG-------------------------TVFVKGQAAE--TPDTSISKSAAISTNFGSF------ 234 (507) T ss_pred CchhhHHHHhc-ccc-cc-------------------------ceEeeccccc--CHHHHHHHHHhhcCCeEEE------ Confidence 11111222210 000 00 0001111110 0011111111111111110 Q ss_pred hccccccceeEEeccccCCcccccccchhHHHHHHHHHHHhhcccceeEEecCCCcchhhHHHHHHHHHHHHhhhhhhhh Q lcl|Aclame:pro 428 QYLENYEVDYVIPLGVHADTKLIGKYDDFAYQLALACAVMSHYNSVTIGIIPTTTPSDISLAGVEEHVKKLENYANEFYM 507 (717) Q Consensus 428 ~~le~~~vd~vi~~~~~a~t~~~~~~~~~~~~~a~~~~~~s~~~~~~i~ii~~~~~~~~~~a~v~~~~~~~~~~~~~~~~ 507 (717) +.. . .....++...+++.|+.... ......... .+. ........+.. T Consensus 235 ----------~~a-----~--~~~~td~~~lalA~wiea~~---~~f~~~~~~---~~a---~~~~~~~~~~~------- 281 (507) T protein:vir:99 235 ----------IYT-----S--TPALTNDQITAVASWNASQN---NMYMYSVPT---TIA---NIGTLYAAVKG------- 281 (507) T ss_pred ----------EEE-----e--ccccChHHHHHHHHHHhhcC---cEEEEEEec---Cch---hhhhhhhhhhh------- Confidence 000 0 00112233456677766431 111222211 111 00000000000 Q ss_pred cccccccccchhhhhccccceeEEEeCcEEEEecccCcceeechhHHHHHHHhcCCccccc-----CCceeccccccccc Q lcl|Aclame:pro 508 RDRFGNIIFDADRNKIDLGQFIEVVAGPDFIVRNTRLGQMASTPDASYIGMVSQLKTQSAP-----TNKPLPSVTALRYT 582 (717) Q Consensus 508 ~d~~~~~~~~~~~~~~~~~~~~~v~~p~~~v~~~~~~~~~~~p~ag~vAGl~A~~gv~~Sp-----aNk~L~gv~~l~~~ 582 (717) ...+....+. .. .....+++.+.|..+...+...+ .+|.++|+. ... T Consensus 282 -----------------~~~~~~~~~~-------~~--~~~~~~~aa~~g~~as~nf~~~ng~~T~~fk~l~GV~--a~~ 333 (507) T protein:vir:99 282 -----------------FSGCALNITS-------DS--LPVDYIEQSPCEILAATDYTRVNATQNYMYYQFPSRN--ITV 333 (507) T ss_pred -----------------cceeEEEeec-------cc--ccchhHHHHHHHHHHhhccCcCccceeecccccCCcc--ccc Confidence 0000000000 00 00011356666777776544333 356777664 346 Q ss_pred CCHHHHHHHHhCCcEEEEEEcCc--eEEEEeceecCCCCccceeeehhhhHHHHHHHHHHHHHHhc---cc-cCCHHHHH Q lcl|Aclame:pro 583 YSANQLNRLTKARFATFKYKQDG--SIGVVDAPTSAHAGSDYTRLSTARIVKEAVNAVREVADPFI---GE-PNDTGNRN 656 (717) Q Consensus 583 lt~~e~d~L~~~GI~~ir~~~g~--G~~v~g~rTt~s~ds~~~~I~vrR~~d~I~~~I~~~~~~~I---ge-pN~~~~~~ 656 (717) ++..|.+.|.++++|++..+.+. .+.++..-.+.+-.-+|..+.+.+=.++|...++..+..++ ++ |-++.... T Consensus 334 lt~t~a~al~~~n~N~y~~~a~~~~~~~~~~~G~~~gG~~~fid~d~~~~~~WL~~~iq~~l~~l~~~~~kIPyt~~G~~ 413 (507) T protein:vir:99 334 SDDTTANLVDANRGNYIGQTQSAGQSLAFYQRGILCGGPNDAVDMNIYANEIWLKSAISAQILSLFLNVPRVPANETGES 413 (507) T ss_pred CCHHHHHHHHhcCCeEEEEeccccceeeEEecCeeeCCcccceeeeeecchHHHHHHHHHHHHHHHhcCCCCccChhhHH Confidence 99999999999999999888764 37777554443323368888787777888888877665432 33 67889999 Q ss_pred HHHHHHHHHHHHHHhCCceecce---------e------------------eee------cChhhhh-CCEEEEEEEEEc Q lcl|Aclame:pro 657 ALTAAVDKRLSKMIENKALLGFD---------F------------------RLV------VTPQQEL-LGEGSIELSLEA 702 (717) Q Consensus 657 ~i~~~I~~fL~~L~~~GaI~G~~---------~------------------~~~------~t~~~i~-~G~l~v~i~v~P 702 (717) .|++.|+.-|++-+++|.|.-.. . ++. .++++.. ++...+.+.+.- T Consensus 414 ~l~a~i~~~l~~av~nG~I~~Gvtl~~~q~~~in~~~~~~~~~~~~~~~Gyy~~~~~~s~~~~~~r~~r~~~~~~~~y~~ 493 (507) T protein:vir:99 414 MLLSVIQSVVNTAKNNGTISAGKNLNVIQQQYITQISGDANAWRQVANIGYWLNITFSSYTNPNTQLTEWKASYQLIYSK 493 (507) T ss_pred HHHHHHHHHHHHHHhccccccCCcccccchheecccccccccccceeccceEEEeCChHhcChhhhhccccceEEEEEEe Confidence 99999999999999999996421 0 011 1222222 344566666666 Q ss_pred cccccEEEEEEEEe Q lcl|Aclame:pro 703 PNELRRLTTIVSLS 716 (717) Q Consensus 703 ~~p~e~I~v~i~~t 716 (717) -..+++|++.-.+= T Consensus 494 ~gaI~~v~~~~~~v 507 (507) T protein:vir:99 494 DDAIRFVEGTDTLI 507 (507) T ss_pred CCeEEEEEeeeecC Confidence 67777766654444 No 73 >protein:vir:96104 Length: 504 # NCBI annotation: hypothetical protein ORF029 # Family: family:all:396 # MgeID: mge:1597 # MgeName: F8 # Cross-refs: genbank:acc:YP_001294446;genbank:gi:149408343;genbank:GeneID:5237223 Probab=28.98 E-value=1.7 Score=19.32 Aligned_cols=393 Identities=10% Similarity=0.027 Sum_probs=131.6 Q ss_pred ccccce-EEEEeecccccccccceEEEeeccccccceEEEEEecCCceEEEEEeeeccCccceeee------eeeecccc Q lcl|Aclame:pro 277 MKLGAS-LEAQYAYNLVEVIQPVIELESIFGGGVYNDIMRKVESKDGAVTVTITKPESKRGMISED------PLVFKSGD 349 (717) Q Consensus 277 ~~t~~~-l~v~~a~~~~~~~~d~i~l~a~~~G~~GN~i~I~v~~~~~~~t~~lt~~~~~~~~~~~~------~~~l~~g~ 349 (717) ++.-++ +.|. ..+.=.+.-++.-++-+.+ +... ..+.+.+.+. ...|+... T Consensus 1 mip~s~iV~V~----------~~v~~~~~~~~~~~~~l~l--~~~~----------~~~~~r~~~y~s~~~V~~~FG~~S 58 (504) T protein:vir:96 1 MISQSRYIRII----------SGVGAGAPVAGRKLILRVM--TTNN----------VIPPGIVIEFDNANAVLSYFGAQS 58 (504) T ss_pred CCCccceeEee----------ecccccccccccccceeEe--eccc----------CCCccceEEecCHHHHHHhcCCCh Confidence 222111 1110 0000000000001111111 0000 0001111110 01122221 Q ss_pred chhHHHH-HHHhhc------CccceeEEeeeccccccccccccchhhhhh---ccCCc-----cCcccchhh-------- Q lcl|Aclame:pro 350 YTNFKML-VDAINN------HPFNNVVRARTKPEFEATFTSTLQAAADAK---FSGGK-----DELSLDKEE-------- 406 (717) Q Consensus 350 ~~~~~~l-v~~IN~------~~~~~~~~a~~~~~~~~~l~s~~~~~~~~~---ltgG~-----dG~~~~a~e-------- 406 (717) ..+.. ....++ .|....+-..........+........-.. ++.|. +|+..+... T Consensus 59 --~ey~aA~~yF~~~~~~~~~P~~l~igR~~~~a~~~~l~g~~~~~~~~~~~~i~~G~lsitv~G~~~~~~~i~~S~~ts 136 (504) T protein:vir:96 59 --EEYQRAAAYFKFISKSVNSPSSISFARWVNTAIAPMVVGDNLPKTIADFAGFSAGVLTIMVGAAEKNITAIDTSAATS 136 (504) T ss_pred --HHHHHHHHHhhcCCCCCccccEEEEEeecCcCccceEEechhHHHHHHHhhhhceEEEEEEcceeeeecccccccccc Confidence 11222 222333 232222211111111111111111111011 11111 121111000 Q ss_pred -------hhhhcccccc---cccchhhhhhhhccccccceeEEecccc----------CC-cccc-------ccc----c Q lcl|Aclame:pro 407 -------MYKRLGGEKN---EEGFVTKQGAYQYLENYEVDYVIPLGVH----------AD-TKLI-------GKY----D 454 (717) Q Consensus 407 -------~~~al~~~~~---~~~~v~~~~~~~~le~~~vd~vi~~~~~----------a~-t~~~-------~~~----~ 454 (717) +..++..... ....+. ++...+ . +++..... ++ +.++ +.. . T Consensus 137 ~~~vA~~i~~al~~~~~~~~~~~tv~----~d~~~~-~--f~its~~tg~~~~~~~~~a~~~~~~~~lgl~~~~~~~v~g 209 (504) T protein:vir:96 137 MDNVASIIQTEIRKNTDPQLAQATVT----WNPNTN-Q--FTLVGATIGTGVLAVAKSADPQDMSTALGWSTSNVVNVAG 209 (504) T ss_pred hHHHHHHHHhhhhcccccccccceEE----EeccCC-e--EEEEeeccccceeEEEeeccccchhhhhhcccccceEEee Confidence 0000000000 000000 000000 0 01111000 00 0000 000 0 Q ss_pred hhHHHHHHHHHHHhhc-ccceeEEecCCCcchhhHHHHHHHHHHHHhhhhhhh--hcccccccccchhhhhccccceeEE Q lcl|Aclame:pro 455 DFAYQLALACAVMSHY-NSVTIGIIPTTTPSDISLAGVEEHVKKLENYANEFY--MRDRFGNIIFDADRNKIDLGQFIEV 531 (717) Q Consensus 455 ~~~~~~a~~~~~~s~~-~~~~i~ii~~~~~~~~~~a~v~~~~~~~~~~~~~~~--~~d~~~~~~~~~~~~~~~~~~~~~v 531 (717) .-+.+..+-+...... .+.....+...+..+...-.+.+|.+ ....++. ..+..... ...........+. T Consensus 210 ~~aet~~~al~al~~~~~~Wy~f~~a~~~~~dd~ilalA~w~e---a~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~-- 282 (504) T protein:vir:96 210 QAADLPDAAVAKSTNVSNNFGSFLFAGATLDNDQIKAVSAWNA---AQNNQFIYTVATSLANL--GALFDLVKGNSGT-- 282 (504) T ss_pred cccccHHHHHHHHHhhcCCeEEEEEEeccCCHHHHHHHHHHHh---hcCceEEEEEeecccch--hhHHHhhhhccee-- Confidence 0001111111111111 11111111111111211112222332 2122111 11110000 0000000000000 Q ss_pred EeCcEEEEecccCcceeechhHHHHHHHhcCCccc-----ccCCceecccccccccCCHHHHHHHHhCCcEEEEEEcCce Q lcl|Aclame:pro 532 VAGPDFIVRNTRLGQMASTPDASYIGMVSQLKTQS-----APTNKPLPSVTALRYTYSANQLNRLTKARFATFKYKQDGS 606 (717) Q Consensus 532 ~~p~~~v~~~~~~~~~~~p~ag~vAGl~A~~gv~~-----SpaNk~L~gv~~l~~~lt~~e~d~L~~~GI~~ir~~~g~G 606 (717) ...++...... .. +.+...|..++..+.. ...+|.++||. ...++..|.+.|.++|+|++..+.+.+ T Consensus 283 ---~~~~~~~~~~~--~~-~~~~~~~~~as~~f~~~ng~~T~~fk~l~GVt--a~~lt~t~~~aL~~~~~N~y~~~a~~~ 354 (504) T protein:vir:96 283 ---ALNVLSATASN--DF-VEQCPSEILAATNYDEPGASQNYMYYQFPGRN--ITVSDDTAANTVDKSRGNYIGVTQANG 354 (504) T ss_pred ---EEEEeecCccc--hh-HHHHHHHHHHhcCcCcccccccccccccCCcC--cccCCHHHHHHHHhcCCeEEEEeeccc Confidence 01111111111 11 2233344444443322 23467788775 446899999999999999998887654 Q ss_pred --EEEE-eceecCCCCccceeeehhhhHHHHHHHHHHHHHHhc---cc-cCCHHHHHHHHHHHHHHHHHHHhCCceecce Q lcl|Aclame:pro 607 --IGVV-DAPTSAHAGSDYTRLSTARIVKEAVNAVREVADPFI---GE-PNDTGNRNALTAAVDKRLSKMIENKALLGFD 679 (717) Q Consensus 607 --~~v~-g~rTt~s~ds~~~~I~vrR~~d~I~~~I~~~~~~~I---ge-pN~~~~~~~i~~~I~~fL~~L~~~GaI~G~~ 679 (717) +.++ .+.++ +-.-+|..|.+.+-.+++...|+..+...+ .+ |-++.....|+..|+.-|++-++.|.|.-.. T Consensus 355 ~~~~~~~~G~~~-gG~~~~~wiDv~~~~~WL~~~lq~~l~~l~~~~~kIPyt~~Gi~~l~a~i~~vl~~av~~G~I~~Gv 433 (504) T protein:vir:96 355 QQLAFYQRGILC-GGPTDAVDMNVYANEIWLKSAIAQALLDLFLNVNAVPASMVGEAMTLAVLQPVLDKATSNGTFTYGK 433 (504) T ss_pred ceeeEEecCeee-CCccccchhhhhhhHHHHHHHHHHHHHHHHhcCCCcccCHhhHHHHHHHHHHHHHHHHhcceeccCc Confidence 5555 45555 323368888999999999999988765533 23 6688999999999999999999999985321 Q ss_pred -----------------------------eee----ecChhhhh-CCEEEEEEEEEccccccEEEEEEEEe Q lcl|Aclame:pro 680 -----------------------------FRL----VVTPQQEL-LGEGSIELSLEAPNELRRLTTIVSLS 716 (717) Q Consensus 680 -----------------------------~~~----~~t~~~i~-~G~l~v~i~v~P~~p~e~I~v~i~~t 716 (717) +.. ..++++.. +....+.+.+.-...+++|++.-.+= T Consensus 434 ~~~~~q~~~I~~~~~~d~~~~~~~~~GYyv~~~~~s~~s~~~r~~R~~~~~~~~y~~~gaI~~v~~~~~~v 504 (504) T protein:vir:96 434 DISAVQQQYITQITGDRRAWRQVQTLGYWINITFSSYTNSNTGLTEWKANYTLIYSKGDAIRFVEGSDVMI 504 (504) T ss_pred cCCccchheecccccccccccceeccceEEEecChhccChhHhhhccccceEEEEEECCeEEEEEeccccC Confidence 000 01112211 12233444444444445444332222 No 74 >protein:vir:107720 Length: 515 # NCBI annotation: gp17 # Family: family:all:396 # MgeID: mge:1520 # MgeName: BcepB1A # Cross-refs: genbank:acc:YP_024865;genbank:gi:48697507;genbank:GeneID:2948336 Probab=27.92 E-value=1.8 Score=19.19 Aligned_cols=454 Identities=11% Similarity=0.006 Sum_probs=160.3 Q ss_pred eeecCcee-Eeccccceeeccccc-c-chhheeecCCcccccccceeehhhhhhhhhe---eeeee-eEeecccccccc- Q lcl|Aclame:pro 155 VIIPPNNY-TLDVGTEEDMKAGTQ-P-TFAQVLLNENVADMESEITVSYEFTYKDAQG---ETKTS-EVLDNNTDKDGK- 226 (717) Q Consensus 155 ~~~~~~~~-~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~---~~~~g-elld~~ie~~~~- 226 (717) ++++.-.+ +|--+.. .++.. - .|.-.++..+.-. +.+ -...|+.++. -|... +-..+ ...-|+ T Consensus 1 m~I~~~~~V~i~~~v~---aa~~~~~~~f~~li~t~~~~~---p~~--r~~~y~s~~~V~~~FG~~S~ey~a-A~~yFsg 71 (515) T protein:vir:10 1 MPISFDKYVAITSGVA---AQQQIAARSFAIRVYTPNPMV---SVD--RLITATSAADVGAYFGTASEEYKR-AVKNFGF 71 (515) T ss_pred CCCCceeEEEeecccc---cCCccccccceeeeeecccCC---Ccc--ceeeecCHHHHHHhcCCChHHHHH-HHHHhhh Confidence 55555322 3322111 11110 0 1111112222111 111 0112222221 12111 11111 122332 Q ss_pred --cCcccCCceEEEEEeeccccc-eeeecCccccc-cchheeccceeEEEEecCc-cccceEEEEeecccccccccceEE Q lcl|Aclame:pro 227 --PMIAKGADVTIKLEHVALAGL-KLYADGIEVVD-AKAFTVAGDQLTIHSNSKM-KLGASLEAQYAYNLVEVIQPVIEL 301 (717) Q Consensus 227 --p~~~~~ag~i~a~r~~~a~~a-~~~~~g~~~~~-s~~~g~~an~i~v~l~d~~-~t~~~l~v~~a~~~~~~~~d~i~l 301 (717) +...+. +.++--|...+..+ .++.+.++-.+ +..-......++|.+.-.. .+.+.|..+-+....+.. . .| T Consensus 72 ~~~q~p~P-~~L~igR~~~~a~~~~l~g~~~~~~~l~~~~~is~G~ltitidG~~~~t~s~i~~S~ats~~~vA-s--~i 147 (515) T protein:vir:10 72 ISKKTRRP-TSIQFARWQREAGPVAIYGGAKKAAALATLQAVTAGAISFLFGGATTVTVSGISFSAATSLADVA-S--EL 147 (515) T ss_pred ccCCcccc-cEEEEEeccCcccceEEEeccchhhhHHhhhcccceeEEEEEcceEEEEeeccccccccCHHHHH-H--HH Confidence 221122 23333343333333 23222221000 1111222333444441111 111222222111100000 0 11 Q ss_pred Eeecccc-cc--ceEEEEEecCCceEEEEEeeeccCccceeeeeeeeccccchhHHHHHHHhhcCccceeEEeeeccccc Q lcl|Aclame:pro 302 ESIFGGG-VY--NDIMRKVESKDGAVTVTITKPESKRGMISEDPLVFKSGDYTNFKMLVDAINNHPFNNVVRARTKPEFE 378 (717) Q Consensus 302 ~a~~~G~-~G--N~i~I~v~~~~~~~t~~lt~~~~~~~~~~~~~~~l~~g~~~~~~~lv~~IN~~~~~~~~~a~~~~~~~ 378 (717) ++.-... .. ....+.+....... +|+-.+..........+....++.+.++.+..--+.. T Consensus 148 ~tal~~~~~~~~~~~tv~~d~~~~~F--~v~s~~tG~~~~is~~~~t~~~~~t~~a~~lglt~~~--------------- 210 (515) T protein:vir:10 148 QTALRANADANLATCTVSYDPVGARF--NFAGSPSDDTVQESISIVPQSNPAIDVAQLLGWNSAQ--------------- 210 (515) T ss_pred HhhhccccccccceeEEEEecCCCeE--EEEEeecCCceeEEEEEecCCCchhhHHHHhcccccc--------------- Confidence 1111100 00 01122222222221 1111111000000000111111111122221000000 Q ss_pred cccccccchhhhhhccCCccCcccchhhhhhhcccccccccchhhhhhhhccccccceeEEeccccCCcccccccchhHH Q lcl|Aclame:pro 379 ATFTSTLQAAADAKFSGGKDELSLDKEEMYKRLGGEKNEEGFVTKQGAYQYLENYEVDYVIPLGVHADTKLIGKYDDFAY 458 (717) Q Consensus 379 ~~l~s~~~~~~~~~ltgG~dG~~~~a~e~~~al~~~~~~~~~v~~~~~~~~le~~~vd~vi~~~~~a~t~~~~~~~~~~~ 458 (717) ......|.+.. +..+...++.....+++. +. ... .+++ ....+... T Consensus 211 -----------~av~~~g~aae--t~~~a~~a~~~~s~nWy~----------------f~-~a~-~~~~---~~~~a~~~ 256 (515) T protein:vir:10 211 -----------GASYIAASPVV--SPVDTLIASVAGNNNFGS----------------IL-FTK-NGGT---GITLSDAE 256 (515) T ss_pred -----------ceEEecccccc--cHHHHHHHHHhccCCeEE----------------EE-Eee-cCcc---ccchhHHH Confidence 00011111110 011111111111111110 00 000 0111 11223344 Q ss_pred HHHHHHHHHhhcccceeEEecCCCcchhhHHHHHHHHHHHHhhhhhhhhcccccccccchhhhhccccceeEEEeCcEEE Q lcl|Aclame:pro 459 QLALACAVMSHYNSVTIGIIPTTTPSDISLAGVEEHVKKLENYANEFYMRDRFGNIIFDADRNKIDLGQFIEVVAGPDFI 538 (717) Q Consensus 459 ~~a~~~~~~s~~~~~~i~ii~~~~~~~~~~a~v~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~v~~p~~~v 538 (717) .++.|..... ......... .... +...-..+... .....+...+ T Consensus 257 a~a~~~e~~~---~~~~~~~~~--~~~~----~~~~~a~~~~~---------------------~~~~~~~~~~------ 300 (515) T protein:vir:10 257 AIALQNQSYN---VAYKFQVGV--DDTT----YSSWQAALAAI---------------------GGVNMIYSPV------ 300 (515) T ss_pred HHHHHHhhcC---ceEEEEecc--Cccc----eechhhhhhhh---------------------hhcCceEEEE------ Confidence 5555543221 111111111 0000 00000000000 0000011100 Q ss_pred EecccCcceeechhHHHHHHHhcCCccccc-----CCceecccccccccCCHHHHHHHHhCCcEEEEEEcCc--eEEEEe Q lcl|Aclame:pro 539 VRNTRLGQMASTPDASYIGMVSQLKTQSAP-----TNKPLPSVTALRYTYSANQLNRLTKARFATFKYKQDG--SIGVVD 611 (717) Q Consensus 539 ~~~~~~~~~~~p~ag~vAGl~A~~gv~~Sp-----aNk~L~gv~~l~~~lt~~e~d~L~~~GI~~ir~~~g~--G~~v~g 611 (717) .... . . +.+..+|..+...+...+ .+|.++|+. ...++..|.+.|.++|+|++..+.+. .+.+|. T Consensus 301 -~~~~---~-~-~~a~~~g~~asvnf~~~ng~iT~kfKq~~Git--a~~lt~t~a~al~~~~~N~Y~~~~~~~~~~~~~~ 372 (515) T protein:vir:10 301 -ALAA---E-Y-HDMQDGIIEAATDFTQQGGATGYMYVQFNNQT--PAVNDDTLSGILDDLNINYYGQTQVNGTNLSFYQ 372 (515) T ss_pred -eccC---c-c-hHHHHHHHHHhcCCCccchhheeccccCCCCc--cccCCHHHHHHHHhcCCeEEEEEeccCceEEEEe Confidence 0000 0 1 234456666776655443 345666553 34589999999999999999888664 588886 Q ss_pred ceecCCCCccceeeehhhhHHHHHHHHHHHHHHhc---cc-cCCHHHHHHHHHHH-HHHHHHHHhCCceecce-ee---- Q lcl|Aclame:pro 612 APTSAHAGSDYTRLSTARIVKEAVNAVREVADPFI---GE-PNDTGNRNALTAAV-DKRLSKMIENKALLGFD-FR---- 681 (717) Q Consensus 612 ~rTt~s~ds~~~~I~vrR~~d~I~~~I~~~~~~~I---ge-pN~~~~~~~i~~~I-~~fL~~L~~~GaI~G~~-~~---- 681 (717) .-.+.+-..+|..|-++|-.|++...|+..+...+ .+ |-++.....|+..| +.-|++-++.|.|.-.. .. T Consensus 373 ~G~~~gG~~~~~WiD~~~g~~WL~~~iq~~l~~L~~s~~KIPytd~G~a~i~a~v~q~vl~~av~nG~I~~Gv~ls~~Q~ 452 (515) T protein:vir:10 373 DGVMMGGPTDPRDSNVYANEQWLKSYAGASFMSLQLAQGKIPANIEGRGLLLGKMTKDIIPAAKLNGTFSIGKTLTVDQQ 452 (515) T ss_pred CCeeeCCccchhHHHHHhhHHHHHHHHHHHHHHHHhcCCCCccChhhHHHHHHHHHHHHHHHHHhCCeeecCcccchhHH Confidence 55554545578889999999999999988765432 23 66788888899877 46899999999986322 10 Q ss_pred ---------ee-------------------cChhhhhCCEEEEEEEEEccccccEEEEEEEEe Q lcl|Aclame:pro 682 ---------LV-------------------VTPQQELLGEGSIELSLEAPNELRRLTTIVSLS 716 (717) Q Consensus 682 ---------~~-------------------~t~~~i~~G~l~v~i~v~P~~p~e~I~v~i~~t 716 (717) +. .++.+.....+.+.+-+.--..+++|++..++= T Consensus 453 ~~i~~~~g~d~~~~~~~~~Gyy~~~~~~~~~~~~~r~~~~~~~~~~y~~g~~i~~i~~~~~~v 515 (515) T protein:vir:10 453 LFVTELTGDDTAWQKVQNLGYWYDVQISSFVDTGGTTKYQAVYSLVYSKDDLIRKVVGTHTLI 515 (515) T ss_pred HHHHhhhcCcccccchhhcceeEecCcCCCCCcccccccCceeEEEEEcCceEEEEEeeeecC Confidence 00 011112222333344444455566666555444 Done!