Query lcl|Aclame:protein:vir:79150|NCBI_annot:bacteriophage gpQ|genbank:acc:YP_001165254;genbank:gi:145708079;genbank:GeneID:5247161 Match_columns 368 No_of_seqs 205 out of 1076 Neff 8.9 Searched_HMMs 1612 Date Mon Dec 2 10:16:51 2013 Command /home/guerois/workspace/virfam/python/lib/hhsearch//hhsearch2 -i .//seq/seq_39 -d /home/guerois/workspace/virfam/python/profile_database/capsid_neck_tail.hhm -glob -cpu 7 -o .//seq/HHR/seq_39_vs_rec_db.hhr No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM 1 protein:vir:79150 Length: 368 100.0 2E-105 1E-108 594.5 37.3 368 1-368 1-368 (368) 2 protein:vir:79207 Length: 351 100.0 1.3E-99 8E-103 562.7 35.7 351 1-359 1-351 (351) 3 protein:vir:103971 Length: 376 100.0 9E-100 5E-103 563.6 33.7 351 1-359 26-376 (376) 4 protein:vir:78191 Length: 351 100.0 5.4E-99 3E-102 559.3 35.1 351 1-359 1-351 (351) 5 protein:vir:98567 Length: 340 100.0 1.1E-97 7E-101 552.1 34.1 340 1-356 1-340 (340) 6 protein:vir:1150 Length: 350 # 100.0 1.7E-96 1.1E-99 545.6 35.0 350 1-355 1-350 (350) 7 protein:vir:2013 Length: 344 # 100.0 2.1E-96 1.3E-99 545.1 34.2 344 1-357 1-344 (344) 8 protein:vir:5691 Length: 344 # 100.0 2.7E-96 1.7E-99 544.5 34.4 344 1-357 1-344 (344) 9 protein:vir:6058 Length: 344 # 100.0 3.9E-96 2.4E-99 543.6 34.5 344 1-357 1-344 (344) 10 protein:vir:100328 Length: 346 100.0 2E-93 1.3E-96 528.8 35.4 342 1-357 1-346 (346) 11 protein:vir:267 Length: 348 # 100.0 1.6E-90 1E-93 512.8 34.0 340 1-368 1-347 (348) 12 protein:vir:78749 Length: 337 100.0 2.6E-87 1.6E-90 495.3 32.1 329 1-353 1-337 (337) 13 protein:vir:3780 Length: 345 # 100.0 4.7E-86 2.9E-89 488.4 33.4 334 1-354 1-345 (345) 14 protein:vir:3743 Length: 345 # 100.0 1.6E-85 9.7E-89 485.5 32.6 334 1-354 1-345 (345) 15 protein:vir:1884 Length: 424 # 100.0 2.7E-74 1.7E-77 423.9 29.1 349 1-368 17-376 (424) 16 protein:vir:189 Length: 424 # 100.0 8.1E-74 5.1E-77 421.3 29.4 344 1-368 17-376 (424) 17 protein:vir:100150 Length: 437 100.0 1.7E-73 1.1E-76 419.5 30.4 352 1-368 1-370 (437) 18 protein:vir:93610 Length: 454 100.0 8.3E-73 5.1E-76 415.8 30.1 349 1-368 4-367 (454) 19 protein:vir:100249 Length: 431 100.0 1E-72 6.5E-76 415.2 30.6 346 1-368 1-381 (431) 20 protein:vir:4337 Length: 434 # 100.0 9.9E-73 6.1E-76 415.3 30.2 350 1-368 1-373 (434) 21 protein:vir:4509 Length: 424 # 100.0 7.7E-72 4.8E-75 410.5 28.7 342 1-368 17-374 (424) 22 protein:vir:8100 Length: 466 # 100.0 1.7E-70 1E-73 403.1 29.4 350 1-368 1-404 (466) 23 protein:vir:10362 Length: 432 100.0 2E-70 1.2E-73 402.7 29.6 344 1-368 10-372 (432) 24 protein:vir:101648 Length: 518 100.0 4.9E-70 3E-73 400.6 30.8 342 1-368 1-366 (518) 25 protein:vir:5737 Length: 419 # 100.0 4.3E-70 2.7E-73 400.9 30.2 347 1-368 1-360 (419) 26 protein:vir:6240 Length: 457 # 100.0 5.8E-70 3.6E-73 400.2 29.9 347 1-368 1-375 (457) 27 protein:vir:105064 Length: 421 100.0 5.5E-70 3.4E-73 400.3 29.5 342 1-368 1-362 (421) 28 protein:vir:1326 Length: 457 # 100.0 1E-69 6.4E-73 398.8 30.1 347 1-368 1-375 (457) 29 protein:vir:7853 Length: 518 # 100.0 1.6E-69 1E-72 397.7 31.2 342 1-368 1-366 (518) 30 protein:vir:102080 Length: 429 100.0 1.7E-69 1E-72 397.7 30.4 349 1-368 1-370 (429) 31 protein:vir:97060 Length: 432 100.0 1.3E-69 8.3E-73 398.2 29.3 344 1-368 10-372 (432) 32 protein:vir:81072 Length: 432 100.0 1.8E-69 1.1E-72 397.5 29.9 344 1-368 7-372 (432) 33 protein:vir:8317 Length: 409 # 100.0 2.3E-69 1.4E-72 396.9 30.1 336 1-368 32-379 (409) 34 protein:vir:79984 Length: 441 100.0 1.2E-68 7.3E-72 393.0 31.0 345 1-368 1-380 (441) 35 protein:vir:9408 Length: 441 # 100.0 1.2E-68 7.3E-72 393.0 31.0 345 1-368 1-380 (441) 36 protein:vir:107605 Length: 432 100.0 1.2E-68 7.6E-72 392.9 29.5 348 1-368 1-373 (432) 37 protein:vir:102855 Length: 432 100.0 1.2E-68 7.6E-72 392.9 29.5 348 1-368 1-373 (432) 38 protein:vir:105002 Length: 432 100.0 1.2E-68 7.6E-72 392.9 29.5 348 1-368 1-373 (432) 39 protein:vir:1380 Length: 422 # 100.0 3.2E-68 2E-71 390.6 31.6 347 1-368 1-372 (422) 40 protein:vir:4454 Length: 414 # 100.0 2.5E-68 1.5E-71 391.2 29.7 343 1-368 1-359 (414) 41 protein:vir:98396 Length: 441 100.0 4.5E-68 2.8E-71 389.8 31.0 345 1-368 1-380 (441) 42 protein:vir:4194 Length: 540 # 100.0 2E-68 1.2E-71 391.7 28.4 331 38-368 1-389 (540) 43 protein:vir:1431 Length: 419 # 100.0 3.6E-68 2.3E-71 390.3 29.5 344 1-368 1-359 (419) 44 protein:vir:80333 Length: 419 100.0 5.2E-68 3.2E-71 389.5 29.8 344 1-368 1-359 (419) 45 protein:vir:81152 Length: 411 100.0 3E-68 1.9E-71 390.8 28.3 343 1-368 1-364 (411) 46 protein:vir:102118 Length: 409 100.0 1.2E-67 7.6E-71 387.4 30.0 342 1-368 1-362 (409) 47 protein:vir:94666 Length: 723 100.0 1.8E-67 1.1E-70 386.4 30.6 331 1-368 1-358 (723) 48 protein:vir:81218 Length: 423 100.0 1.3E-67 8.3E-71 387.2 28.9 346 1-368 1-376 (423) 49 protein:vir:483 Length: 413 # 100.0 6.6E-67 4.1E-70 383.4 30.1 339 1-368 1-358 (413) 50 protein:vir:4156 Length: 542 # 100.0 3.6E-67 2.2E-70 384.8 28.3 346 1-368 6-391 (542) 51 protein:vir:1266 Length: 416 # 100.0 1.2E-66 7.7E-70 381.9 30.1 344 1-368 1-358 (416) 52 protein:vir:4598 Length: 416 # 100.0 4.4E-66 2.7E-69 378.9 31.2 337 1-368 1-355 (416) 53 protein:vir:81095 Length: 416 100.0 4.4E-66 2.7E-69 378.9 31.2 337 1-368 1-355 (416) 54 protein:vir:8418 Length: 409 # 100.0 5E-66 3.1E-69 378.6 29.4 341 1-368 1-353 (409) 55 protein:vir:101647 Length: 460 100.0 3.1E-66 1.9E-69 379.8 26.9 353 1-368 1-412 (460) 56 protein:vir:93943 Length: 409 100.0 2.3E-65 1.5E-68 374.9 30.2 339 1-368 1-355 (409) 57 protein:vir:94426 Length: 409 100.0 2.8E-65 1.8E-68 374.4 30.2 339 1-368 1-355 (409) 58 protein:vir:96980 Length: 409 100.0 7.9E-65 4.9E-68 372.0 30.0 338 1-368 1-355 (409) 59 protein:vir:9702 Length: 406 # 100.0 1.7E-64 1.1E-67 370.2 31.6 334 1-368 1-348 (406) 60 protein:vir:1082 Length: 359 # 100.0 1E-64 6.5E-68 371.4 29.9 334 1-368 1-352 (359) 61 protein:vir:3868 Length: 417 # 100.0 1.5E-64 9.5E-68 370.4 30.4 335 1-368 1-351 (417) 62 protein:vir:2683 Length: 412 # 100.0 1.3E-63 7.8E-67 365.4 29.7 341 1-368 1-358 (412) 63 protein:vir:102727 Length: 945 100.0 2.4E-63 1.5E-66 363.9 29.1 351 1-368 71-461 (945) 64 protein:vir:100187 Length: 385 100.0 5.8E-63 3.6E-66 361.8 30.7 333 1-368 1-343 (385) 65 protein:vir:80644 Length: 551 100.0 4.9E-63 3E-66 362.2 29.9 348 1-368 39-444 (551) 66 protein:vir:100691 Length: 535 100.0 9.8E-63 6.1E-66 360.5 28.2 356 1-368 13-437 (535) 67 protein:vir:4854 Length: 386 # 100.0 4.1E-62 2.5E-65 357.1 30.8 330 1-368 1-357 (386) 68 protein:vir:63755 Length: 547 100.0 4.6E-62 2.9E-65 356.8 30.6 350 1-368 31-440 (547) 69 protein:vir:7407 Length: 392 # 100.0 7.2E-62 4.4E-65 355.8 29.8 332 1-368 3-349 (392) 70 protein:vir:80796 Length: 574 100.0 6.5E-62 4E-65 356.0 29.5 357 1-368 27-448 (574) 71 protein:vir:3843 Length: 397 # 100.0 1.1E-61 6.6E-65 354.9 30.4 330 1-368 1-339 (397) 72 protein:vir:96579 Length: 576 100.0 5E-62 3.1E-65 356.6 28.4 350 1-368 35-445 (576) 73 protein:vir:100882 Length: 383 100.0 2.1E-61 1.3E-64 353.2 31.1 334 1-368 1-343 (383) 74 protein:vir:4995 Length: 384 # 100.0 1.6E-61 9.8E-65 353.9 28.0 338 1-368 1-357 (384) 75 protein:vir:9359 Length: 348 # 100.0 4.4E-61 2.7E-64 351.5 28.4 280 65-368 1-294 (348) 76 protein:vir:3153 Length: 467 # 100.0 5.8E-61 3.6E-64 350.8 29.0 321 36-368 1-386 (467) 77 protein:vir:960 Length: 413 # 100.0 1.2E-60 7.2E-64 349.2 28.0 342 1-368 4-365 (413) 78 protein:vir:99312 Length: 563 100.0 2E-60 1.2E-63 347.9 28.6 344 1-368 46-446 (563) 79 protein:vir:95599 Length: 563 100.0 2E-60 1.2E-63 347.9 28.6 344 1-368 46-446 (563) 80 protein:vir:99452 Length: 651 100.0 6E-61 3.7E-64 350.7 25.0 343 1-368 1-478 (651) 81 protein:vir:104259 Length: 403 100.0 1.4E-60 8.5E-64 348.8 26.9 330 1-368 4-348 (403) 82 protein:vir:1023 Length: 392 # 100.0 9.4E-60 5.8E-63 344.2 30.1 333 1-368 3-349 (392) 83 protein:vir:3989 Length: 392 # 100.0 9.4E-60 5.8E-63 344.2 30.1 333 1-368 3-349 (392) 84 protein:vir:4828 Length: 382 # 100.0 5E-60 3.1E-63 345.7 28.6 328 1-368 1-354 (382) 85 protein:vir:4952 Length: 386 # 100.0 2.1E-59 1.3E-62 342.3 29.5 330 1-368 1-342 (386) 86 protein:vir:80134 Length: 403 100.0 2.7E-59 1.7E-62 341.7 26.2 336 1-368 1-347 (403) 87 protein:vir:95378 Length: 406 100.0 1.4E-58 8.5E-62 337.8 28.8 340 1-368 1-350 (406) 88 protein:vir:98853 Length: 219 100.0 2.7E-58 1.7E-61 336.2 22.4 210 147-356 1-219 (219) 89 protein:vir:78641 Length: 278 100.0 1.5E-56 9.3E-60 326.6 27.5 264 65-352 1-278 (278) 90 protein:vir:79772 Length: 648 100.0 1.4E-55 8.6E-59 321.3 30.5 359 1-368 1-431 (648) 91 protein:vir:6210 Length: 394 # 100.0 3.9E-56 2.4E-59 324.4 27.0 326 1-368 1-342 (394) 92 protein:vir:95965 Length: 385 100.0 6.5E-52 4E-55 301.2 26.7 320 1-368 1-338 (385) 93 protein:vir:100650 Length: 395 100.0 8.1E-52 5E-55 300.7 26.1 318 1-368 1-334 (395) 94 protein:vir:101289 Length: 395 100.0 8.1E-52 5E-55 300.7 26.1 318 1-368 1-334 (395) 95 protein:vir:9507 Length: 395 # 100.0 8.1E-52 5E-55 300.7 26.1 318 1-368 1-334 (395) 96 protein:vir:78310 Length: 376 100.0 9.7E-50 6E-53 289.3 25.4 320 1-368 1-333 (376) 97 protein:vir:9641 Length: 395 # 100.0 1.1E-47 6.5E-51 278.1 25.4 322 1-368 1-346 (395) 98 protein:vir:4089 Length: 395 # 100.0 1.4E-47 9E-51 277.4 24.8 322 1-368 1-340 (395) 99 protein:vir:98643 Length: 395 100.0 3E-47 1.8E-50 275.7 26.1 325 1-368 1-346 (395) 100 protein:vir:93867 Length: 378 100.0 1.3E-46 8E-50 272.2 23.9 298 1-368 1-322 (378) 101 protein:vir:94002 Length: 378 100.0 1.1E-45 7E-49 267.0 25.6 298 1-368 1-322 (378) 102 protein:vir:1661 Length: 378 # 100.0 1.2E-45 7.6E-49 266.8 25.4 298 1-368 1-322 (378) 103 protein:vir:858 Length: 378 # 100.0 2.8E-43 1.7E-46 253.9 24.6 295 1-368 1-322 (378) 104 protein:vir:94869 Length: 378 100.0 4E-43 2.5E-46 253.0 24.8 297 1-368 1-322 (378) 105 protein:vir:4698 Length: 251 # 100.0 1.7E-39 1E-42 233.1 21.2 239 1-267 1-251 (251) 106 protein:vir:5249 Length: 437 # 99.7 1.6E-17 9.9E-21 112.7 21.8 332 1-368 1-372 (437) 107 protein:vir:79647 Length: 435 99.4 5.9E-14 3.7E-17 93.1 18.4 332 1-368 5-379 (435) 108 protein:vir:104338 Length: 422 99.3 5.2E-13 3.2E-16 87.9 19.6 325 1-368 1-367 (422) 109 protein:vir:79511 Length: 448 99.3 9.4E-13 5.9E-16 86.5 20.8 351 1-368 1-395 (448) 110 protein:vir:94049 Length: 532 99.3 1.4E-12 8.9E-16 85.5 20.2 347 1-368 24-437 (532) 111 protein:vir:80040 Length: 461 99.3 3.6E-12 2.2E-15 83.3 20.7 338 1-368 1-403 (461) 112 protein:vir:107742 Length: 537 99.3 5.4E-12 3.4E-15 82.4 21.4 348 1-368 25-450 (537) 113 protein:vir:77981 Length: 448 99.3 3.2E-12 2E-15 83.6 19.9 354 1-368 1-395 (448) 114 protein:vir:107662 Length: 427 99.2 2E-11 1.2E-14 79.3 20.4 326 8-368 1-368 (427) 115 protein:vir:103860 Length: 528 99.0 2.3E-09 1.4E-12 68.0 25.7 339 1-368 1-388 (528) 116 protein:vir:99232 Length: 526 99.0 2.6E-09 1.6E-12 67.7 24.2 338 1-368 1-388 (526) 117 protein:vir:79233 Length: 526 98.9 4.8E-09 3E-12 66.2 24.4 339 1-368 1-388 (526) 118 protein:vir:99563 Length: 862 98.9 5.1E-10 3.2E-13 71.5 18.9 346 1-368 66-483 (862) 119 protein:vir:96068 Length: 765 98.9 1.3E-09 8.1E-13 69.3 20.3 338 1-368 37-455 (765) 120 protein:vir:1986 Length: 512 # 98.9 1.3E-08 7.8E-12 63.9 24.6 339 1-368 1-386 (512) 121 protein:vir:79063 Length: 491 98.8 3.9E-08 2.4E-11 61.2 25.5 324 1-368 1-369 (491) 122 protein:vir:389 Length: 530 # 98.8 4.9E-09 3E-12 66.2 18.9 353 1-368 1-467 (530) 123 protein:vir:6382 Length: 553 # 98.7 5.6E-09 3.5E-12 65.8 18.5 356 1-368 1-484 (553) 124 protein:vir:108215 Length: 469 98.7 8E-08 5E-11 59.5 24.7 339 1-368 1-397 (469) 125 protein:vir:107880 Length: 491 98.7 3.1E-08 1.9E-11 61.8 21.9 338 1-368 1-369 (491) 126 protein:vir:99853 Length: 488 98.7 3.5E-08 2.2E-11 61.5 20.9 334 1-368 1-362 (488) 127 protein:vir:96738 Length: 505 98.7 2.8E-09 1.8E-12 67.4 14.7 353 1-368 1-446 (505) 128 protein:vir:79538 Length: 502 98.6 1E-08 6.5E-12 64.3 17.3 346 1-368 11-436 (502) 129 protein:vir:3420 Length: 533 # 98.6 1.2E-08 7.3E-12 64.1 17.0 355 1-368 1-470 (533) 130 protein:vir:10321 Length: 495 98.4 2.4E-07 1.5E-10 56.9 19.0 348 1-368 1-433 (495) 131 protein:vir:95542 Length: 548 98.4 1.9E-09 1.2E-12 68.4 7.4 338 1-368 1-440 (548) 132 protein:vir:78161 Length: 355 98.1 2.7E-06 1.7E-09 51.1 19.3 232 125-368 1-267 (355) 133 protein:vir:106716 Length: 698 98.1 7.3E-07 4.5E-10 54.2 16.0 346 1-368 1-477 (698) 134 protein:vir:78589 Length: 695 98.0 2.4E-06 1.5E-09 51.4 16.5 348 1-368 1-477 (695) 135 protein:vir:98816 Length: 446 98.0 5.3E-06 3.3E-09 49.5 18.1 342 1-368 1-420 (446) 136 protein:vir:101541 Length: 694 97.8 1.8E-05 1.1E-08 46.5 18.2 348 1-368 1-476 (694) 137 protein:vir:3648 Length: 695 # 97.7 8.7E-06 5.4E-09 48.3 15.5 351 1-368 1-477 (695) 138 protein:vir:102426 Length: 631 97.6 1.1E-06 6.7E-10 53.3 9.3 359 1-368 1-435 (631) 139 protein:vir:105782 Length: 449 97.5 3.8E-06 2.4E-09 50.3 10.7 344 1-368 1-399 (449) 140 protein:vir:8654 Length: 629 # 97.4 1.5E-05 9.1E-09 47.1 12.5 358 1-368 1-430 (629) 141 protein:vir:99088 Length: 629 97.3 1.9E-05 1.2E-08 46.5 12.2 358 1-368 1-430 (629) 142 protein:vir:106027 Length: 629 97.3 7.4E-05 4.6E-08 43.2 15.4 358 1-368 1-426 (629) 143 protein:vir:9568 Length: 410 # 97.0 0.00022 1.4E-07 40.7 20.8 300 36-368 1-374 (410) 144 protein:vir:80680 Length: 441 97.0 0.00022 1.4E-07 40.6 20.1 310 1-368 20-390 (441) 145 protein:vir:95254 Length: 488 96.9 0.00026 1.6E-07 40.2 22.4 342 1-368 1-418 (488) 146 protein:vir:9751 Length: 422 # 96.8 0.00035 2.2E-07 39.5 22.1 294 48-368 1-387 (422) 147 protein:vir:1634 Length: 409 # 96.6 0.00045 2.8E-07 38.9 20.8 302 48-368 1-387 (409) 148 protein:vir:107517 Length: 639 96.6 0.00011 6.7E-08 42.3 11.3 352 1-368 1-435 (639) 149 protein:vir:97900 Length: 639 96.6 0.00011 6.7E-08 42.3 11.3 352 1-368 1-435 (639) 150 protein:vir:94742 Length: 409 96.5 0.00058 3.6E-07 38.3 22.0 302 48-368 1-387 (409) 151 protein:vir:3609 Length: 452 # 96.1 0.00099 6.2E-07 37.1 21.0 308 1-368 26-396 (452) 152 protein:vir:98444 Length: 434 95.6 0.0017 1E-06 35.8 20.4 299 47-368 1-376 (434) 153 protein:vir:99522 Length: 470 95.5 0.002 1.2E-06 35.4 20.1 322 1-368 34-416 (470) 154 protein:vir:93747 Length: 472 94.8 0.0035 2.2E-06 34.1 23.2 311 1-368 36-413 (472) 155 protein:vir:99916 Length: 504 94.5 0.0042 2.6E-06 33.6 24.9 318 29-368 1-424 (504) 156 protein:vir:733 Length: 453 # 94.4 0.0046 2.8E-06 33.4 20.8 324 1-368 26-402 (453) 157 protein:vir:103219 Length: 201 94.3 0.00057 3.6E-07 38.4 7.0 133 221-368 1-147 (201) 158 protein:vir:2427 Length: 485 # 94.0 0.0057 3.5E-06 32.9 20.4 310 36-368 1-412 (485) 159 protein:vir:1236 Length: 483 # 93.3 0.0079 4.9E-06 32.1 23.3 321 1-368 44-424 (483) 160 protein:vir:3964 Length: 453 # 93.2 0.0083 5.2E-06 32.0 21.4 308 1-368 29-397 (453) 161 protein:vir:2732 Length: 501 # 93.1 0.0089 5.5E-06 31.8 20.0 327 1-368 48-436 (501) 162 protein:vir:95113 Length: 474 92.5 0.011 6.8E-06 31.3 22.8 313 1-368 36-416 (474) 163 protein:vir:106491 Length: 646 92.4 0.012 7.1E-06 31.2 17.0 352 1-368 1-409 (646) 164 protein:vir:5839 Length: 533 # 91.9 0.014 8.6E-06 30.8 15.8 350 1-368 4-427 (533) 165 protein:vir:79043 Length: 479 91.9 0.014 8.6E-06 30.8 22.0 320 1-368 32-429 (479) 166 protein:vir:96494 Length: 501 91.8 0.014 8.9E-06 30.7 22.6 325 1-368 48-436 (501) 167 protein:vir:8184 Length: 474 # 91.7 0.015 9.1E-06 30.6 20.9 319 1-368 27-421 (474) 168 protein:vir:4898 Length: 502 # 91.3 0.017 1E-05 30.4 21.7 329 1-368 49-437 (502) 169 protein:vir:97336 Length: 492 90.8 0.019 1.2E-05 30.0 22.8 318 1-368 53-433 (492) 170 protein:vir:38 Length: 496 # N 89.9 0.024 1.5E-05 29.5 19.3 331 1-368 16-448 (496) 171 protein:vir:102950 Length: 471 89.4 0.026 1.6E-05 29.2 24.3 330 1-368 17-422 (471) 172 protein:vir:94101 Length: 474 89.3 0.027 1.7E-05 29.2 23.4 329 1-368 24-420 (474) 173 protein:vir:105889 Length: 474 89.3 0.027 1.7E-05 29.2 23.4 329 1-368 24-420 (474) 174 protein:vir:97447 Length: 474 89.3 0.027 1.7E-05 29.1 22.6 316 1-368 36-416 (474) 175 protein:vir:94498 Length: 474 89.3 0.027 1.7E-05 29.1 22.6 316 1-368 36-416 (474) 176 protein:vir:9871 Length: 429 # 89.2 0.028 1.7E-05 29.1 24.3 286 48-368 1-379 (429) 177 protein:vir:7768 Length: 484 # 89.0 0.029 1.8E-05 29.0 19.8 309 32-368 1-411 (484) 178 protein:vir:94805 Length: 492 87.2 0.041 2.5E-05 28.2 23.4 322 1-368 53-433 (492) 179 protein:vir:95899 Length: 474 87.1 0.041 2.5E-05 28.2 22.0 320 1-368 36-416 (474) 180 protein:vir:96266 Length: 474 87.1 0.041 2.5E-05 28.2 22.0 320 1-368 36-416 (474) 181 protein:vir:105292 Length: 478 86.6 0.044 2.7E-05 28.0 20.2 312 1-368 35-421 (478) 182 protein:vir:78805 Length: 511 86.4 0.046 2.8E-05 27.9 22.3 324 1-368 49-447 (511) 183 protein:vir:96366 Length: 511 86.4 0.046 2.8E-05 27.9 22.3 324 1-368 49-447 (511) 184 protein:vir:99072 Length: 479 84.0 0.064 4E-05 27.1 21.2 300 38-368 1-402 (479) 185 protein:vir:9306 Length: 511 # 82.7 0.075 4.6E-05 26.8 21.5 327 1-368 49-447 (511) 186 protein:vir:96839 Length: 474 81.1 0.089 5.5E-05 26.4 20.9 317 1-368 35-420 (474) 187 protein:vir:2341 Length: 488 # 81.1 0.089 5.5E-05 26.4 17.2 321 1-368 24-418 (488) 188 protein:vir:107112 Length: 478 81.0 0.09 5.6E-05 26.3 22.4 323 1-368 35-421 (478) 189 protein:vir:104082 Length: 485 79.9 0.1 6.2E-05 26.1 19.6 311 32-368 1-412 (485) 190 protein:vir:97171 Length: 512 79.5 0.1 6.4E-05 26.0 20.0 325 1-368 49-448 (512) 191 protein:vir:78537 Length: 480 79.2 0.11 6.6E-05 25.9 19.2 294 47-368 1-403 (480) 192 protein:vir:106639 Length: 481 78.6 0.11 7E-05 25.8 21.5 327 1-368 39-425 (481) 193 protein:vir:103951 Length: 511 78.5 0.11 7E-05 25.8 21.6 326 1-368 49-447 (511) 194 protein:vir:4073 Length: 279 # 78.3 0.12 7.2E-05 25.7 10.6 267 1-368 1-273 (279) 195 protein:vir:105461 Length: 470 78.1 0.12 7.3E-05 25.7 22.7 305 1-368 38-419 (470) 196 protein:vir:96240 Length: 511 78.0 0.12 7.3E-05 25.7 22.3 327 1-368 49-447 (511) 197 protein:vir:95806 Length: 440 76.0 0.14 8.7E-05 25.3 22.0 324 1-368 6-390 (440) 198 protein:vir:106571 Length: 499 75.8 0.14 8.9E-05 25.2 22.1 320 1-368 25-422 (499) 199 protein:vir:4223 Length: 486 # 75.0 0.15 9.4E-05 25.1 20.6 306 32-368 1-412 (486) 200 protein:vir:102602 Length: 456 72.5 0.18 0.00011 24.6 18.4 300 45-368 1-406 (456) 201 protein:vir:105819 Length: 456 72.5 0.18 0.00011 24.6 18.4 300 45-368 1-406 (456) 202 protein:vir:7987 Length: 456 # 72.0 0.19 0.00012 24.6 16.9 304 39-368 1-406 (456) 203 protein:vir:101418 Length: 569 71.9 0.19 0.00012 24.5 14.0 360 1-368 1-488 (569) 204 protein:vir:94709 Length: 522 71.3 0.2 0.00012 24.4 13.7 340 1-368 1-441 (522) 205 protein:vir:99781 Length: 511 67.3 0.25 0.00016 23.8 21.2 324 1-368 49-447 (511) 206 protein:vir:5961 Length: 503 # 66.1 0.27 0.00017 23.7 22.7 328 1-368 38-435 (503) 207 protein:vir:96179 Length: 468 60.7 0.37 0.00023 23.0 23.0 319 1-368 35-421 (468) 208 protein:vir:78227 Length: 480 52.7 0.55 0.00034 22.0 22.1 295 47-368 1-403 (480) 209 protein:vir:94546 Length: 506 52.5 0.55 0.00034 22.0 19.9 322 1-368 36-446 (506) 210 protein:vir:2500 Length: 501 # 42.2 0.9 0.00056 20.8 23.1 310 1-368 1-430 (501) 211 protein:vir:98265 Length: 524 38.0 1.1 0.00067 20.4 21.4 349 1-368 13-474 (524) 212 protein:vir:5665 Length: 511 # 30.4 1.6 0.00098 19.5 17.6 351 1-368 1-464 (511) 213 protein:vir:80959 Length: 499 22.8 2.4 0.0015 18.5 22.3 328 1-368 16-451 (499) No 1 >protein:vir:79150 Length: 368 # NCBI annotation: bacteriophage gpQ # Family: family:all:196 # MgeID: mge:1863 # MgeName: RSA1 # Cross-refs: genbank:acc:YP_001165254;genbank:gi:145708079;genbank:GeneID:5247161 Probab=100.00 E-value=2.1e-105 Score=594.47 Aligned_cols=368 Identities=100% Similarity=1.515 Sum_probs=356.4 Q ss_pred CCcCCCCccccccccccccccCCCcchhhccccCceEEEECCCceeccChHHHHHHHHHHhccchhcccccHHHHHHHHH Q lcl|Aclame:pro 1 MSRNKTRRAARAASAHVRTANTDAPTEHHTDRAAQAEVFSFGDPVEVLDRRELLDYVECMRMGQWYEPPMPWDGLARSFR 80 (368) Q Consensus 1 m~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~r 80 (368) |||||++..++.++.+.+++...++....+..++++++|+||+|++|++.+++++|++|+++|.|+++||++..|+.+.+ T Consensus 1 m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fg~p~~~~~~~~~~~~~~~~~~~~~~~~pi~~~~la~~~~ 80 (368) T protein:vir:79 1 MSRNKTRRAARAASAHVRTANTDAPTEHHTDRAAQAEVFSFGDPVEVLDRRELLDYVECMRMGQWYEPPMPWDGLARSFR 80 (368) T ss_pred CCccccccchhccCcccccccccCcchhhccccCceEEEEcCCceeecchhhHHHHHHHHhccchhccCcCHHHHHHHHh Confidence 99999999988888888888888888888889999999999999999999999999999999999999999999999999 Q ss_pred hcccccchhhhccchHHhhccCCCCcCHHHHHHHHHhHhhhCCeeEEEEecCCcceEEEEEecccccccccCCCeeEEEe Q lcl|Aclame:pro 81 AAAHHSSAVYVKRNILVSTFIPHPLLSRATFERLVLDWQVFGNAYLERRENVLGGTIRLDTPLAKYVRRGLDLNTYFFVQ 160 (368) Q Consensus 81 ~~~~~~~~~~~~~~~~l~~~~~n~~~~~~~~~~~~~~~ll~Gnay~~i~r~~~G~~~~L~~l~p~~v~~~~~~~~~~~~~ 160 (368) .+++|++++..+||.+.+++.|||+++...|++++.|++++||||++++||..|++++|+|++|.+|++..+++.|+++. T Consensus 81 ~~~~h~~~~~~~~n~l~l~~~Pn~~~t~~~f~~l~~d~ll~Gnay~~~~r~~~G~~~~L~~l~~~~v~~~~~~~~~~~~~ 160 (368) T protein:vir:79 81 AAAHHSSAVYVKRNILVSTFIPHPLLSRATFERLVLDWQVFGNAYLERRENVLGGTIRLDTPLAKYVRRGLDLNTYFFVQ 160 (368) T ss_pred hccccchhhhhhcchhhhhcCCCcCCCHHHHHHHHHHHhhcCCeEEEEEEcCCCCEEEEEEeCcccceeeccCCEEEEEe Confidence 99999999999999999999999999987778899999999999999999999999999999999999999999999999 Q ss_pred CCceEEEEcCccEEEecCCCCcCCccccchhhHHHHHHHHHHHHHHHHHHHHhccCCCceeEEeCCCCccHHHHHHHHHH Q lcl|Aclame:pro 161 NWQQPYTFAAGSVFHLQEPDINQEVYGLPEYLSALNATWLNESATLFRRRYYKNGSHAGFILYMTDAAQKQEDVDTLREA 240 (368) Q Consensus 161 ~~~~~~~~~~~dviH~r~~~~~~~~~G~spi~~a~~~i~~~~~a~~~~~~~f~ng~~p~gil~~~~~~l~~e~~~~~k~~ 240 (368) .+++.++|+++||||||.+++.+++||+|||.++++++.++.++++|++++|+||++|+|||++++..+++|+++++++. T Consensus 161 ~~~~~~~~~~~dIihir~~~~~~~~yGlsp~~~a~~si~l~~aa~~~~~~~~~NGa~~~gil~~~~~~l~~e~~~~lk~~ 240 (368) T protein:vir:79 161 NWQQPYTFAAGSVFHLQEPDINQEVYGLPEYLSALNATWLNESATLFRRRYYKNGSHAGFILYMTDAAQKQEDVDTLREA 240 (368) T ss_pred cCCeEEEEccccEEEecCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEeCCCCCCHHHHHHHHHH Confidence 99999999999999999999999999999999999999999999999999999999999999999888999999999999 Q ss_pred HHHhccccccccccccccCccccccccccccchhhHHHHHHHHHHHHHHHHHHhCCChHHhcccccccccccCHHHHHHH Q lcl|Aclame:pro 241 MKSAKGPGNFRNLFMYAPNGKKDGIQLLPVSEVAAKDEFWNIKNVTRDDQLAAHRVPPQLMGIIPNNTGGFGDVEKAAMV 320 (368) Q Consensus 241 ~~~~~g~~n~~~~~~l~~~g~~~g~~~~pl~~~~~d~qf~e~~~~~~~~Ia~~fgVPp~~lg~~~~~~~~~sn~e~~~~~ 320 (368) |++++|.+|+|+++++.++|+++|++|+|++++++|+||+|++++++++||++|||||.+||+.++++++|+|+|++.+. T Consensus 241 ~~~~~G~~N~g~~~vl~~~g~~~g~~~~pls~~~~d~qf~e~k~~~~~eIa~af~VPp~llGi~~~~t~~~sn~e~~~~~ 320 (368) T protein:vir:79 241 MKSAKGPGNFRNLFMYAPNGKKDGIQLLPVSEVAAKDEFWNIKNVTRDDQLAAHRVPPQLMGIIPNNTGGFGDVEKAAMV 320 (368) T ss_pred HHHhcCCcccCceeEecCCCCccceeEEEcCCCHHHHHHHHHHHHhHHHHHHHhCCCHHHccccCCCCCccccHHHHHHH Confidence 99999999999999999999999999999999999999999999999999999999999999998888899999999999 Q ss_pred HHHHHHHHHHHHHHHHHhhcCcceEeechhhhhcCChhhhhhhhhhcC Q lcl|Aclame:pro 321 FARNEVKPLQDRLLAINDWIGDEVVRFAPYALGGHDQPAAAPGGQRSA 368 (368) Q Consensus 321 f~~~tl~P~~~~ie~l~~~l~~~~~~F~~~~Llr~D~~~ra~~~~~~~ 368 (368) |++++|.|++++||++|++|++++++||.+.|+++|.++||++++|+| T Consensus 321 f~~~~l~Pl~~~ie~ln~~l~~e~~rF~~~~l~~~D~~a~a~~~~rsa 368 (368) T protein:vir:79 321 FARNEVKPLQDRLLAINDWIGDEVVRFAPYALGGHDQPAAAPGGQRSA 368 (368) T ss_pred HHHHHHHHHHHHHHHHHhccCcceeeechhHhhcccccccCCcccccC Confidence 999999999999999999999999999999999999999999999999 No 2 >protein:vir:79207 Length: 351 # NCBI annotation: gp5, phage portal protein, pbsx family # Family: family:all:196 # MgeID: mge:1866 # MgeName: phiE202 # Cross-refs: genbank:acc:YP_001111036;genbank:gi:134288763;genbank:GeneID:4960726 Probab=100.00 E-value=1.3e-99 Score=562.74 Aligned_cols=351 Identities=62% Similarity=1.077 Sum_probs=329.5 Q ss_pred CCcCCCCccccccccccccccCCCcchhhccccCceEEEECCCceeccChHHHHHHHHHHhccchhcccccHHHHHHHHH Q lcl|Aclame:pro 1 MSRNKTRRAARAASAHVRTANTDAPTEHHTDRAAQAEVFSFGDPVEVLDRRELLDYVECMRMGQWYEPPMPWDGLARSFR 80 (368) Q Consensus 1 m~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~r 80 (368) |||||+++.+.... .......+..++.+.+|+||+|+||++.+++++|++|+.+|.|+++|+++..|+.+.+ T Consensus 1 ~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~~pp~~~~~la~~~~ 72 (351) T protein:vir:79 1 MSKRRSRAPRTFAA--------APNPSAGSAAPARAEVFTFDDPTPVMNRAEILDYVECWSNGEWFEPPVSFAGLAKSFR 72 (351) T ss_pred CCCCCCCCCCCCCC--------CCchhhhhcccceeEEEEcCCceeecCcchhhhhhhhhhcCceecCCCCHHHHHHHHh Confidence 99988765431111 1112234444567899999999999999999999999999999999999999999999 Q ss_pred hcccccchhhhccchHHhhccCCCCcCHHHHHHHHHhHhhhCCeeEEEEecCCcceEEEEEecccccccccCCCeeEEEe Q lcl|Aclame:pro 81 AAAHHSSAVYVKRNILVSTFIPHPLLSRATFERLVLDWQVFGNAYLERRENVLGGTIRLDTPLAKYVRRGLDLNTYFFVQ 160 (368) Q Consensus 81 ~~~~~~~~~~~~~~~~l~~~~~n~~~~~~~~~~~~~~~ll~Gnay~~i~r~~~G~~~~L~~l~p~~v~~~~~~~~~~~~~ 160 (368) .+++|++++..+++..+.+++|||+++...|++++.|++++||||++++||+.|++++|+|++|.+|++..+.++|+++. T Consensus 73 ~~~~h~~~l~~k~n~l~~~~~Pnp~~t~~~f~~~v~d~ll~Gnay~~~~r~~~G~~~~L~~l~~~~v~~~~~~~~~~~~~ 152 (351) T protein:vir:79 73 ASTHHSSALFFKANVLASTFRPHRWLSRHAFERWALDFLTFGNGYLERRRNMVGGTLRLEPALAKYVRRKADFSGFVYVN 152 (351) T ss_pred hhHhhhhhhhhhhhHHhhcccCCCCCCHHHHHHHHHHHHhcCCeEEEEEECCCCCEEEEEEeCCcceeeeecCCeEEEEe Confidence 99999999999999999999999999998778899999999999999999999999999999999999999999999999 Q ss_pred CCceEEEEcCccEEEecCCCCcCCccccchhhHHHHHHHHHHHHHHHHHHHHhccCCCceeEEeCCCCccHHHHHHHHHH Q lcl|Aclame:pro 161 NWQQPYTFAAGSVFHLQEPDINQEVYGLPEYLSALNATWLNESATLFRRRYYKNGSHAGFILYMTDAAQKQEDVDTLREA 240 (368) Q Consensus 161 ~~~~~~~~~~~dviH~r~~~~~~~~~G~spi~~a~~~i~~~~~a~~~~~~~f~ng~~p~gil~~~~~~l~~e~~~~~k~~ 240 (368) .+++.+.|+++||||||.+++.+++||+||+.++++++.++.+++.|+++||+||++|+|||+++++.+++|++++++++ T Consensus 153 ~~g~~~~~~~~eIihir~~~~~~~~yGl~~~~~a~~si~l~~~a~~~~~~~f~NGa~pg~il~~~~~~ls~e~~~~lk~~ 232 (351) T protein:vir:79 153 GWQERHEFEPDSVFQLVRPDINQEVYGLPEYLSSLHSAWLNESSTLFRRKYYENGSHAGFILYMTDAAQKQDDVDNMRDA 232 (351) T ss_pred cCceEEEEcCccEEEeCCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEecCCCCCHHHHHHHHHH Confidence 99999999999999999999999999999999999999999999999999999999999999999888999999999999 Q ss_pred HHHhccccccccccccccCccccccccccccchhhHHHHHHHHHHHHHHHHHHhCCChHHhcccccccccccCHHHHHHH Q lcl|Aclame:pro 241 MKSAKGPGNFRNLFMYAPNGKKDGIQLLPVSEVAAKDEFWNIKNVTRDDQLAAHRVPPQLMGIIPNNTGGFGDVEKAAMV 320 (368) Q Consensus 241 ~~~~~g~~n~~~~~~l~~~g~~~g~~~~pl~~~~~d~qf~e~~~~~~~~Ia~~fgVPp~~lg~~~~~~~~~sn~e~~~~~ 320 (368) |++.+|.+|+++++++.++|+++|++|+|++++++|+||+|+++++++|||++|||||.++|+.++++++|+|+|++.+. T Consensus 233 ~~~~~G~~N~~~~~v~~~~g~~~gi~~~pl~~~~~d~ef~e~k~~s~~eI~~a~~VPp~llGi~~~~t~~~~n~e~~~~~ 312 (351) T protein:vir:79 233 LKNAKGPGNFRNVFMYAPGGKKDGIQLIPVSEVAAKDEFFNIKNVTRDDLLAAHRVPPQLLGIVPSNSGGFGTPDTAARV 312 (351) T ss_pred HHHhcCccccCceeEecCCCCccceEEEEcCCChhHHHHHHHHHHhHHHHHHHhCCCHHHhcccCCCCCCcccHHHHHHH Confidence 99999999999999999999999999999999999999999999999999999999999999998888899999999999 Q ss_pred HHHHHHHHHHHHHHHHHhhcCcceEeechhhhhcCChhh Q lcl|Aclame:pro 321 FARNEVKPLQDRLLAINDWIGDEVVRFAPYALGGHDQPA 359 (368) Q Consensus 321 f~~~tl~P~~~~ie~l~~~l~~~~~~F~~~~Llr~D~~~ 359 (368) |+++||.|++++||++|++|+.++++||.++|+|+|.++ T Consensus 313 f~~~~l~Pl~~~ie~ln~~lg~~~~~F~~~~llr~d~~a 351 (351) T protein:vir:79 313 FGRNEIRPLQARFAELNDWLGDEVVTFDDYEIPPAPVAA 351 (351) T ss_pred HHHHHHHHHHHHHHHHHhhcCcceeeeChhhhccccccC Confidence 999999999999999999999999999999999999999 No 3 >protein:vir:103971 Length: 376 # NCBI annotation: pbsx family phage portal protein # Family: family:all:196 # MgeID: mge:1665 # MgeName: phi52237 # Cross-refs: genbank:acc:YP_293752;genbank:gi:72537722;genbank:GeneID:3608098 Probab=100.00 E-value=8.8e-100 Score=563.64 Aligned_cols=351 Identities=63% Similarity=1.083 Sum_probs=329.8 Q ss_pred CCcCCCCccccccccccccccCCCcchhhccccCceEEEECCCceeccChHHHHHHHHHHhccchhcccccHHHHHHHHH Q lcl|Aclame:pro 1 MSRNKTRRAARAASAHVRTANTDAPTEHHTDRAAQAEVFSFGDPVEVLDRRELLDYVECMRMGQWYEPPMPWDGLARSFR 80 (368) Q Consensus 1 m~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~r 80 (368) |||+|+++.+.....+... ..+..++...+|+||+|+||++.+++++|.+|+++|.|+++|+++..|+++.+ T Consensus 26 ~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~f~fg~p~~v~~~~~~~~~~~~~~~~~~~~pp~~~~~La~~~~ 97 (376) T protein:vir:10 26 MSKRRSRAPRTFAAAPNPS--------AGSAAPARAEVFTFDDPTPVMNRAEILDYVECWSNGEWFEPPVSFAGLAKSFR 97 (376) T ss_pred chhccCCCcccchhhhhHh--------hhccCcceeEEEEcCCceeccCcchhhhhhhhhhcCceecCCCCHHHHHHHHh Confidence 9999877665333322222 22233456789999999999999999999999999999999999999999999 Q ss_pred hcccccchhhhccchHHhhccCCCCcCHHHHHHHHHhHhhhCCeeEEEEecCCcceEEEEEecccccccccCCCeeEEEe Q lcl|Aclame:pro 81 AAAHHSSAVYVKRNILVSTFIPHPLLSRATFERLVLDWQVFGNAYLERRENVLGGTIRLDTPLAKYVRRGLDLNTYFFVQ 160 (368) Q Consensus 81 ~~~~~~~~~~~~~~~~l~~~~~n~~~~~~~~~~~~~~~ll~Gnay~~i~r~~~G~~~~L~~l~p~~v~~~~~~~~~~~~~ 160 (368) .+++|++++..+++....++.|||+++...|++++.|++++||||++++||..|+|++|+|++|.+|++..++++|+++. T Consensus 98 ~~~~h~s~l~~k~n~l~~~~~Pnp~lT~~~f~~~v~d~ll~Gnay~~~~rn~~G~~~~L~pl~~~~vr~~~d~~~~~~~~ 177 (376) T protein:vir:10 98 ASTHHSSALFFKANVLASTFRPHRWLSRHAFERWALDFLTFGNGYLERRRNMVGGTLRLEPALAKYVRRKADFNGFVYVN 177 (376) T ss_pred hhHHhhhhHHHHhHHHHhccCCCCCCCHHHHHHHHHHHHhcCCeEEEEEECCCCCEEEEEEeCCcceEEEeeCCeEEEEE Confidence 99999999999999999999999999998888999999999999999999999999999999999999999999999999 Q ss_pred CCceEEEEcCccEEEecCCCCcCCccccchhhHHHHHHHHHHHHHHHHHHHHhccCCCceeEEeCCCCccHHHHHHHHHH Q lcl|Aclame:pro 161 NWQQPYTFAAGSVFHLQEPDINQEVYGLPEYLSALNATWLNESATLFRRRYYKNGSHAGFILYMTDAAQKQEDVDTLREA 240 (368) Q Consensus 161 ~~~~~~~~~~~dviH~r~~~~~~~~~G~spi~~a~~~i~~~~~a~~~~~~~f~ng~~p~gil~~~~~~l~~e~~~~~k~~ 240 (368) .+++.+.|+++|||||+.+++.+++||+||+.++++++.++.++++|+++||+||++|+|||++++..+++|++++++++ T Consensus 178 ~~~~~~~~~~~eViHir~~~~~~~~yGls~~~~a~~si~l~~aa~~f~~~~f~NGa~pggIl~~~d~~l~~e~~~~lr~~ 257 (376) T protein:vir:10 178 GWQERHEFEPDSVFQLVRPDINQEVYGLPEYLSSLHSAWLNESSTLFRRKYYENGSHAGFILYMTDAAQKQDDVDNMRDA 257 (376) T ss_pred cCCeEEEEccccEEEecCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEecCCCCCHHHHHHHHHH Confidence 99999999999999999999999999999999999999999999999999999999999999999888999999999999 Q ss_pred HHHhccccccccccccccCccccccccccccchhhHHHHHHHHHHHHHHHHHHhCCChHHhcccccccccccCHHHHHHH Q lcl|Aclame:pro 241 MKSAKGPGNFRNLFMYAPNGKKDGIQLLPVSEVAAKDEFWNIKNVTRDDQLAAHRVPPQLMGIIPNNTGGFGDVEKAAMV 320 (368) Q Consensus 241 ~~~~~g~~n~~~~~~l~~~g~~~g~~~~pl~~~~~d~qf~e~~~~~~~~Ia~~fgVPp~~lg~~~~~~~~~sn~e~~~~~ 320 (368) |++..|.+|+++++++.++|+++|++|+|++++++|+||+|+++++++|||++|||||.++|+.++++++|+|+|++.+. T Consensus 258 ~~~~~G~~N~~~~~vl~~~g~~~Gi~~~pls~~~~d~qf~e~k~~~~~eIa~af~VPp~llGi~~~~t~~~sn~eq~~~~ 337 (376) T protein:vir:10 258 LKNAKGPGNFRNVFMYAPGGKKDGIQLIPVSEVAAKDEFFNIKNVTRDDLLAAHRVPPQLLGIVPSNSGGFGTPDTAARV 337 (376) T ss_pred HHHhcCccccCceeEecCCCCccceEEEEccCCHHHHHHHHHHHHhHHHHHHHhCCCHHHhcccCCCCCCcccHHHHHHH Confidence 99999999999999999999999999999999999999999999999999999999999999999888899999999999 Q ss_pred HHHHHHHHHHHHHHHHHhhcCcceEeechhhhhcCChhh Q lcl|Aclame:pro 321 FARNEVKPLQDRLLAINDWIGDEVVRFAPYALGGHDQPA 359 (368) Q Consensus 321 f~~~tl~P~~~~ie~l~~~l~~~~~~F~~~~Llr~D~~~ 359 (368) |+++||.|++++||++|++|+.++++||.++|+|+|.|+ T Consensus 338 f~~~~L~Pl~~~ieeln~~L~~~~~~F~~~~Llr~d~ka 376 (376) T protein:vir:10 338 FGRNEIRPLQARFAELNDWLGEEVVRFDDYEIPPAPVAA 376 (376) T ss_pred HHHHHHHHHHHHHHHHHhhccccccccChhHhhcccccC Confidence 999999999999999999999999999999999999999 No 4 >protein:vir:78191 Length: 351 # NCBI annotation: gp5, phage portal protein, pbsx family # Family: family:all:196 # MgeID: mge:1848 # MgeName: phiE12-2 # Cross-refs: genbank:acc:YP_001111155;genbank:gi:134288732;genbank:GeneID:4960651 Probab=100.00 E-value=5.4e-99 Score=559.33 Aligned_cols=351 Identities=63% Similarity=1.084 Sum_probs=329.4 Q ss_pred CCcCCCCccccccccccccccCCCcchhhccccCceEEEECCCceeccChHHHHHHHHHHhccchhcccccHHHHHHHHH Q lcl|Aclame:pro 1 MSRNKTRRAARAASAHVRTANTDAPTEHHTDRAAQAEVFSFGDPVEVLDRRELLDYVECMRMGQWYEPPMPWDGLARSFR 80 (368) Q Consensus 1 m~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~r 80 (368) |||||+++.+.... .......+..++.+.+|+||+|+||++.+++++|++|+.+|.|+++|+++..|+.+.+ T Consensus 1 ~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~~pp~~~~~la~~~~ 72 (351) T protein:vir:78 1 MSKRRSRAPRTFAA--------APNPSAGSAAPARAEVFTFDDPTPVMNRAEILDYVECWSNGEWFEPPVSFAGLAKSFR 72 (351) T ss_pred CCCCCCCCCCCCCC--------CCchhhhhcccceeEEEEcCCceeecCcchhhhhhhhhccCceecCCCCHHHHHHHHh Confidence 99988765432111 1112234444567899999999999999999999999999999999999999999999 Q ss_pred hcccccchhhhccchHHhhccCCCCcCHHHHHHHHHhHhhhCCeeEEEEecCCcceEEEEEecccccccccCCCeeEEEe Q lcl|Aclame:pro 81 AAAHHSSAVYVKRNILVSTFIPHPLLSRATFERLVLDWQVFGNAYLERRENVLGGTIRLDTPLAKYVRRGLDLNTYFFVQ 160 (368) Q Consensus 81 ~~~~~~~~~~~~~~~~l~~~~~n~~~~~~~~~~~~~~~ll~Gnay~~i~r~~~G~~~~L~~l~p~~v~~~~~~~~~~~~~ 160 (368) .+++|++++..+++..+.++.|||+++...|++++.+++++||||++++||..|++++|+|+++.+|++..+.++|+++. T Consensus 73 ~~~~h~~~l~~k~n~l~~~~~Pn~~~t~~~f~~~~~d~ll~Gnay~~~~rn~~G~~~~L~pl~~~~v~~~~~~~~~~~~~ 152 (351) T protein:vir:78 73 ASTHHSSALFFKANVLASTFRPHRWLSRHAFERWALDFLTFGNGYLERRRNMVGGTLRLEPALAKYVRRKADFSGFVYVN 152 (351) T ss_pred hhHhhhhhhhhhhhHHhhcccCCCCCCHHHHHHHHHHHHhcCCeEEEEEECCCCCEEEEEEecCcceEEeeeCCeEEEEe Confidence 99999999999999999999999999998888899999999999999999999999999999999999999999999999 Q ss_pred CCceEEEEcCccEEEecCCCCcCCccccchhhHHHHHHHHHHHHHHHHHHHHhccCCCceeEEeCCCCccHHHHHHHHHH Q lcl|Aclame:pro 161 NWQQPYTFAAGSVFHLQEPDINQEVYGLPEYLSALNATWLNESATLFRRRYYKNGSHAGFILYMTDAAQKQEDVDTLREA 240 (368) Q Consensus 161 ~~~~~~~~~~~dviH~r~~~~~~~~~G~spi~~a~~~i~~~~~a~~~~~~~f~ng~~p~gil~~~~~~l~~e~~~~~k~~ 240 (368) .+++.+.|+++||||||.+++.+++||+||+..+++++.++.+++.|+++||+||++|+|||+++++.+++|++++++++ T Consensus 153 ~~~~~~~~~~~eVihir~~~~~~~~yGl~~~~~a~~si~l~~~a~~~~~~~f~NGa~pggIl~~~~~~ls~e~~~~lr~~ 232 (351) T protein:vir:78 153 GWQERHEFAPDSVFQLVRPDINQEVYGLPEYLSSLHSAWLNESSTLFRRKYYENGSHAGFILYMTDAAQKQDDVDNMRDA 232 (351) T ss_pred cCCeEEEEccccEEEEcCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEecCCCCCHHHHHHHHHH Confidence 99999999999999999999999999999999999999999999999999999999999999999888999999999999 Q ss_pred HHHhccccccccccccccCccccccccccccchhhHHHHHHHHHHHHHHHHHHhCCChHHhcccccccccccCHHHHHHH Q lcl|Aclame:pro 241 MKSAKGPGNFRNLFMYAPNGKKDGIQLLPVSEVAAKDEFWNIKNVTRDDQLAAHRVPPQLMGIIPNNTGGFGDVEKAAMV 320 (368) Q Consensus 241 ~~~~~g~~n~~~~~~l~~~g~~~g~~~~pl~~~~~d~qf~e~~~~~~~~Ia~~fgVPp~~lg~~~~~~~~~sn~e~~~~~ 320 (368) |++++|.+|+++++++.++|+++|++|+|++++++|+||+|+++++++|||++|||||.++|+.++++++|+|+|++.+. T Consensus 233 ~~~~~G~~N~~~~~v~~~~g~~~g~k~~pls~~~~d~qf~e~k~~~~~eIa~a~~VPp~llGi~~~~t~~~sn~e~~~~~ 312 (351) T protein:vir:78 233 LKNAKGPGNFRNVFMYAPGGKKDGIQLIPVSEVAAKDEFFNIKNVTRDDLLAAHRVPPQLLGIVPSNSGGFGTPDTAARV 312 (351) T ss_pred HHHhcCcccccceeeecCCCCccceeEEEcCCChhHHHHHHHHHHhHHHHHHHhCCCHHHhcccCCCCCCcccHHHHHHH Confidence 99999999999999999999999999999999999999999999999999999999999999998888899999999999 Q ss_pred HHHHHHHHHHHHHHHHHhhcCcceEeechhhhhcCChhh Q lcl|Aclame:pro 321 FARNEVKPLQDRLLAINDWIGDEVVRFAPYALGGHDQPA 359 (368) Q Consensus 321 f~~~tl~P~~~~ie~l~~~l~~~~~~F~~~~Llr~D~~~ 359 (368) |++++|.|++++||++|++|+.++|+||.++|+|+|.|+ T Consensus 313 f~~~~l~P~~~~iee~n~~l~~~~~~F~~~~Llr~d~ka 351 (351) T protein:vir:78 313 FGRNEIRPLQARFAELNDWLGDEVVRFDDYEIPPAPVAA 351 (351) T ss_pred HHHHHHHHHHHHHHHHHhhcCccceecChhhhccccccC Confidence 999999999999999999999999999999999999999 No 5 >protein:vir:98567 Length: 340 # NCBI annotation: gp1 # Family: family:all:196 # MgeID: mge:1533 # MgeName: PSP3 # Cross-refs: genbank:acc:NP_958056;genbank:gi:41057353;genbank:GeneID:2744238 Probab=100.00 E-value=1.1e-97 Score=552.12 Aligned_cols=340 Identities=59% Similarity=1.066 Sum_probs=322.9 Q ss_pred CCcCCCCccccccccccccccCCCcchhhccccCceEEEECCCceeccChHHHHHHHHHHhccchhcccccHHHHHHHHH Q lcl|Aclame:pro 1 MSRNKTRRAARAASAHVRTANTDAPTEHHTDRAAQAEVFSFGDPVEVLDRRELLDYVECMRMGQWYEPPMPWDGLARSFR 80 (368) Q Consensus 1 m~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~r 80 (368) |||+|+++++.+ ....++.+.+||||+|++|++++++++|++|+.+|.|+++|+++..|+.+.+ T Consensus 1 m~~~~~~~~~~~----------------~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~pp~~~~~la~l~~ 64 (340) T protein:vir:98 1 MSKRKPRKAVAM----------------TASAPQKMEAFTFGEPVPVLDKRDILDYVECISNGKWYEPPVSFSGLAKSLR 64 (340) T ss_pred CCCCCCCccccc----------------cccCccceeEEEcCCceeecCcchhhhhhhhhhcCceecCCCCHHHHHHHHH Confidence 998876544311 1123345789999999999999999999999999999999999999999999 Q ss_pred hcccccchhhhccchHHhhccCCCCcCHHHHHHHHHhHhhhCCeeEEEEecCCcceEEEEEecccccccccCCCeeEEEe Q lcl|Aclame:pro 81 AAAHHSSAVYVKRNILVSTFIPHPLLSRATFERLVLDWQVFGNAYLERRENVLGGTIRLDTPLAKYVRRGLDLNTYFFVQ 160 (368) Q Consensus 81 ~~~~~~~~~~~~~~~~l~~~~~n~~~~~~~~~~~~~~~ll~Gnay~~i~r~~~G~~~~L~~l~p~~v~~~~~~~~~~~~~ 160 (368) .+++|++++..+++....++.|||++++..|++++.|++++||||++++||..|++++|+|+++.+|++..+++.||++. T Consensus 65 a~~~h~s~i~~k~n~l~~~~~Pn~~lt~~~f~~~~~d~ll~Gnay~~~~rn~~G~~~~L~pl~~~~vr~~~~~~~~~~~~ 144 (340) T protein:vir:98 65 SAVHHSSPIYVKRNVLASTYIPHPLLSRQDFSRFALDYLVFGNAFLEQRHSVTGQLIKLLTSPAKYTRRGVDDSVFWFVE 144 (340) T ss_pred hccccchhhhhhhhHHhhccCCCCCCCHHHHHHHHHHHHhcCCeEEEEEECCCCcEEEEEEeCCceEEEcccCcEEEEEe Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred CCceEEEEcCccEEEecCCCCcCCccccchhhHHHHHHHHHHHHHHHHHHHHhccCCCceeEEeCCCCccHHHHHHHHHH Q lcl|Aclame:pro 161 NWQQPYTFAAGSVFHLQEPDINQEVYGLPEYLSALNATWLNESATLFRRRYYKNGSHAGFILYMTDAAQKQEDVDTLREA 240 (368) Q Consensus 161 ~~~~~~~~~~~dviH~r~~~~~~~~~G~spi~~a~~~i~~~~~a~~~~~~~f~ng~~p~gil~~~~~~l~~e~~~~~k~~ 240 (368) .+++.+.|.++||||||.+++.+++||+||+..+++++.++.++++|+++||+||++|+|||+++++.+++|+++++|++ T Consensus 145 ~~~~~~~~~~~eViHir~~~~~~~~~Gls~~~~a~~si~l~~aa~~~~~~~f~NGa~pg~il~~~~~~ls~e~~~~lk~~ 224 (340) T protein:vir:98 145 NFTQPHEFAPDTVFHLLEPDINQEIYGLPEYLSALNSAWLNESATLFRRKYYQNGAHAGYIMYVTDPAQSATDVESLRDA 224 (340) T ss_pred cCCeEEEEccccEEEEcCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEecCCCCCHHHHHHHHHH Confidence 99999999999999999999999999999999999999999999999999999999999999999888999999999999 Q ss_pred HHHhccccccccccccccCccccccccccccchhhHHHHHHHHHHHHHHHHHHhCCChHHhcccccccccccCHHHHHHH Q lcl|Aclame:pro 241 MKSAKGPGNFRNLFMYAPNGKKDGIQLLPVSEVAAKDEFWNIKNVTRDDQLAAHRVPPQLMGIIPNNTGGFGDVEKAAMV 320 (368) Q Consensus 241 ~~~~~g~~n~~~~~~l~~~g~~~g~~~~pl~~~~~d~qf~e~~~~~~~~Ia~~fgVPp~~lg~~~~~~~~~sn~e~~~~~ 320 (368) |++++|.+|+++++++.++|+++|++|+|++.+++|+||+|++++++++||++|||||+++|+.++++++|+|+|++.+. T Consensus 225 ~~~~~G~~n~~~~~vl~~~g~~~g~~~~pls~~~~d~qf~e~k~~~~~eIa~a~~VPp~llGi~~~~t~~~sn~e~~~~~ 304 (340) T protein:vir:98 225 MRNSKGLGNFKNLFFYSPNGKPDGIKIVPLSEVATKDDFFNIKKASAADLMDAHRVPFQLMGGKPENIGSLGDVEKVAKV 304 (340) T ss_pred HHHhcCccccCceeEecCCCCccceEEEEcCCChhHHHHHHHHHhhHHHHHHHhCCCHHHhcccCCCCCccccHHHHHHH Confidence 99999999999999999999999999999999999999999999999999999999999999998888899999999999 Q ss_pred HHHHHHHHHHHHHHHHHhhcCcceEeechhhhhcCC Q lcl|Aclame:pro 321 FARNEVKPLQDRLLAINDWIGDEVVRFAPYALGGHD 356 (368) Q Consensus 321 f~~~tl~P~~~~ie~l~~~l~~~~~~F~~~~Llr~D 356 (368) |+++||.|++++||++|++|++++++|+.+.|+++| T Consensus 305 f~~~~l~Pl~~~iee~n~~L~~e~~rF~~~~l~~~d 340 (340) T protein:vir:98 305 FVRNELSPLQDRFREVNDWLGMEVIRFKEYTLDNPE 340 (340) T ss_pred HHHHHHHHHHHHHHHHHhcccccccccCccccccCC Confidence 999999999999999999999999999999999999 No 6 >protein:vir:1150 Length: 350 # NCBI annotation: predicted capsid packaging protein # Family: family:all:196 # MgeID: mge:24 # MgeName: phi CTX # Cross-refs: genbank:acc:NP_490599;genbank:gi:17313219;genbank:GeneID:927315 Probab=100.00 E-value=1.7e-96 Score=545.60 Aligned_cols=350 Identities=57% Similarity=0.986 Sum_probs=326.9 Q ss_pred CCcCCCCccccccccccccccCCCcchhhccccCceEEEECCCceeccChHHHHHHHHHHhccchhcccccHHHHHHHHH Q lcl|Aclame:pro 1 MSRNKTRRAARAASAHVRTANTDAPTEHHTDRAAQAEVFSFGDPVEVLDRRELLDYVECMRMGQWYEPPMPWDGLARSFR 80 (368) Q Consensus 1 m~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~r 80 (368) |||+|+++.++.+. .+........+.+.+.+++||||+|++|++++++++|++||++|.++++|+++..|+++.+ T Consensus 1 m~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~p~~v~~~~~~~~y~~~~~~~~~~~pp~~~~~la~~~~ 75 (350) T protein:vir:11 1 MSKRRSHRRQQPVT-----VQSAQEGEFIPRQGGRAEAFTFGDPMPVLDGRGILDYLECWPNGRWYEPPLSMEGLAKSVG 75 (350) T ss_pred CCccccCCCcCccc-----cCCcchhhhccccccceEEEEeCCceeecCcchhhHHHHHhhcCccccCCCCHHHHHHHHh Confidence 99988766664433 3334444556677778999999999999999999999999999999999999999999999 Q ss_pred hcccccchhhhccchHHhhccCCCCcCHHHHHHHHHhHhhhCCeeEEEEecCCcceEEEEEecccccccccCCCeeEEEe Q lcl|Aclame:pro 81 AAAHHSSAVYVKRNILVSTFIPHPLLSRATFERLVLDWQVFGNAYLERRENVLGGTIRLDTPLAKYVRRGLDLNTYFFVQ 160 (368) Q Consensus 81 ~~~~~~~~~~~~~~~~l~~~~~n~~~~~~~~~~~~~~~ll~Gnay~~i~r~~~G~~~~L~~l~p~~v~~~~~~~~~~~~~ 160 (368) .+++|++++..+++....+++|||+++...|++++.|++++||||++++||..|++++|+|+++.+|++..+++.||++. T Consensus 76 ~~~~h~~~l~~k~n~l~~~~~Pn~~~t~~~f~~~v~d~ll~Gnay~~~~rn~~G~~~~L~~l~~~~vr~~~~~~~~~~~~ 155 (350) T protein:vir:11 76 SSVYLQSGLKFKRNMLAKTFIPHRLLSRATFEQFSLDWLTFGSAYLEQPRSRLGTRMPLQAPLAKYMRRGTDLETFYQVR 155 (350) T ss_pred hhhhhccchhhhhhhhhhcccCCCCCCHHHHHHHHHHHHhcCCeEEEEEEcCCCCEEEEEEeCCceeEeeecCCeEEEEe Confidence 99999999999999999999999999998888899999999999999999999999999999999999999999999999 Q ss_pred CCceEEEEcCccEEEecCCCCcCCccccchhhHHHHHHHHHHHHHHHHHHHHhccCCCceeEEeCCCCccHHHHHHHHHH Q lcl|Aclame:pro 161 NWQQPYTFAAGSVFHLQEPDINQEVYGLPEYLSALNATWLNESATLFRRRYYKNGSHAGFILYMTDAAQKQEDVDTLREA 240 (368) Q Consensus 161 ~~~~~~~~~~~dviH~r~~~~~~~~~G~spi~~a~~~i~~~~~a~~~~~~~f~ng~~p~gil~~~~~~l~~e~~~~~k~~ 240 (368) .++..+.|+++||||||.+++.+++||+||+.++++++.++.++++|+++||+||++|+|||++++..+++|+++++++. T Consensus 156 ~~~~~~~~~~~eVihir~~~~~~~~yGls~~~~a~~si~l~~~a~~~~~~~f~NGa~~~gil~~~~~~ls~e~~~~l~~~ 235 (350) T protein:vir:11 156 SWKDEHEFEKGSVIQLREADINQEIYGVPEWFCALQSALLNESATLFRRKYYNNGSHAGFILYMTDAAQNEEDIDALRTA 235 (350) T ss_pred eCCeEEEECcccEEEeCCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEecCCCCCHHHHHHHHHH Confidence 99999999999999999999999999999999999999999999999999999999999999999888999999999999 Q ss_pred HHHhccccccccccccccCccccccccccccchhhHHHHHHHHHHHHHHHHHHhCCChHHhcccccccccccCHHHHHHH Q lcl|Aclame:pro 241 MKSAKGPGNFRNLFMYAPNGKKDGIQLLPVSEVAAKDEFWNIKNVTRDDQLAAHRVPPQLMGIIPNNTGGFGDVEKAAMV 320 (368) Q Consensus 241 ~~~~~g~~n~~~~~~l~~~g~~~g~~~~pl~~~~~d~qf~e~~~~~~~~Ia~~fgVPp~~lg~~~~~~~~~sn~e~~~~~ 320 (368) |++++|++|+++++++.++|+++|++|+|++++++|+||+|+++++++|||++|||||+++|+.++++++|+|+|++.+. T Consensus 236 ~~~~~G~~N~~~~~v~~~~g~~~g~~~~pl~~~~~d~qf~e~k~~~~~eIa~a~~VPp~llGi~~~~t~~~sn~e~~~~~ 315 (350) T protein:vir:11 236 LKTAKGPGNFRNLFVYAPNGKKEGIQLIPVSEVAAKDEFGSIKNISRDDQLAGLRVYPQLMGVVPQNAGGFGSISDAAAV 315 (350) T ss_pred HHHhcCccccCceeeecCCCCccceEEEEcCCChhHHHHHHHHHHhHHHHHHHhCCCHHHhcccCCCCCCcCCHHHHHHH Confidence 99999999999999999999999999999999999999999999999999999999999999998888899999999999 Q ss_pred HHHHHHHHHHHHHHHHHhhcCcceEeechhhhhcC Q lcl|Aclame:pro 321 FARNEVKPLQDRLLAINDWIGDEVVRFAPYALGGH 355 (368) Q Consensus 321 f~~~tl~P~~~~ie~l~~~l~~~~~~F~~~~Llr~ 355 (368) |++++|.|++++||++|++|++++++|+.+.+-.. T Consensus 316 f~~~~L~P~~~~ie~ln~~l~~~~~~F~~~~~~~l 350 (350) T protein:vir:11 316 WASLELAPMQTRLQQVNEMIGEEVVRFAQFDAPGL 350 (350) T ss_pred HHHHHHHHHHHHHHHHHhhcCccccccCcccccCC Confidence 99999999999999999999998888776665444 No 7 >protein:vir:2013 Length: 344 # NCBI annotation: gpQ # Family: family:all:196 # MgeID: mge:315 # MgeName: P2 # Cross-refs: genbank:acc:NP_046757;genbank:gi:9630328;genbank:GeneID:1261529 Probab=100.00 E-value=2.1e-96 Score=545.08 Aligned_cols=344 Identities=58% Similarity=1.048 Sum_probs=322.1 Q ss_pred CCcCCCCccccccccccccccCCCcchhhccccCceEEEECCCceeccChHHHHHHHHHHhccchhcccccHHHHHHHHH Q lcl|Aclame:pro 1 MSRNKTRRAARAASAHVRTANTDAPTEHHTDRAAQAEVFSFGDPVEVLDRRELLDYVECMRMGQWYEPPMPWDGLARSFR 80 (368) Q Consensus 1 m~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~r 80 (368) |||||+++.+.. ....+..++.+++|+||+|+||++++++++|++|+.+|.|+++|+++..|+.+.+ T Consensus 1 ~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~f~~p~~v~~~~~~~~~~~~~~~~~~~~pp~~~~~la~~~~ 67 (344) T protein:vir:20 1 MSKKKGKTPQPA-------------AKTMTASGPKMEAFTFGEPVPVLDRRDILDYVECISNGRWYEPPVSFTGLAKSLR 67 (344) T ss_pred CCcccCCCCcch-------------hhhhhccCCceEEEEcCCceEecCcchhhhhhhhhhcCceecCCCCHHHHHHHHh Confidence 999998644311 1223344566899999999999999999999999999999999999999999999 Q ss_pred hcccccchhhhccchHHhhccCCCCcCHHHHHHHHHhHhhhCCeeEEEEecCCcceEEEEEecccccccccCCCeeEEEe Q lcl|Aclame:pro 81 AAAHHSSAVYVKRNILVSTFIPHPLLSRATFERLVLDWQVFGNAYLERRENVLGGTIRLDTPLAKYVRRGLDLNTYFFVQ 160 (368) Q Consensus 81 ~~~~~~~~~~~~~~~~l~~~~~n~~~~~~~~~~~~~~~ll~Gnay~~i~r~~~G~~~~L~~l~p~~v~~~~~~~~~~~~~ 160 (368) .+++|++++..+++....+++|||++++..|++++.|++++||||++++||..|+|++|+|+++.+|++..+++.||++. T Consensus 68 a~~~h~~~i~~k~n~l~~~~~Pn~~lt~~~f~~~~~d~ll~Gnay~~i~rn~~G~~~~L~pl~~~~vr~~~~~~~~~~~~ 147 (344) T protein:vir:20 68 AAVHHSSPIYVKRNILASTFIPHPWLSQQDFSRFVLDFLVFGNAFLEKRYSTTGKVIRLETSPAKYTRRGVEEDVYWWVP 147 (344) T ss_pred hhhhhCccceehhhhHHHhccCCCCCCHHHHHHHHHHHHhcCCeEEEEEECCCCcEEEEEEcCCceeEeeecCCEEEEEc Confidence 99999999999999999999999999998889999999999999999999999999999999999999999999999999 Q ss_pred CCceEEEEcCccEEEecCCCCcCCccccchhhHHHHHHHHHHHHHHHHHHHHhccCCCceeEEeCCCCccHHHHHHHHHH Q lcl|Aclame:pro 161 NWQQPYTFAAGSVFHLQEPDINQEVYGLPEYLSALNATWLNESATLFRRRYYKNGSHAGFILYMTDAAQKQEDVDTLREA 240 (368) Q Consensus 161 ~~~~~~~~~~~dviH~r~~~~~~~~~G~spi~~a~~~i~~~~~a~~~~~~~f~ng~~p~gil~~~~~~l~~e~~~~~k~~ 240 (368) .++..+.|+++||||+|.+++.+++||+|||.++++++.++.++++|+++||+||++|++||++++..+++|+++++++. T Consensus 148 ~~~~~~~~~~~eIiHir~~~~~~~~yGls~~~~a~~si~l~~~a~~~~~~~f~NGa~p~~Il~~~d~~l~~e~~~~ik~~ 227 (344) T protein:vir:20 148 SFNEPTAFAPGSVFHLLEPDINQELYGLPEYLSALNSAWLNESATLFRRKYYENGAHAGYIMYVTDAVQDRNDIEMLREN 227 (344) T ss_pred cCCeEEEEcCccEEEeCCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEecCcCCCHHHHHHHHHH Confidence 99999999999999999999989999999999999999999999999999999999999999999888999999999999 Q ss_pred HHHhccccccccccccccCccccccccccccchhhHHHHHHHHHHHHHHHHHHhCCChHHhcccccccccccCHHHHHHH Q lcl|Aclame:pro 241 MKSAKGPGNFRNLFMYAPNGKKDGIQLLPVSEVAAKDEFWNIKNVTRDDQLAAHRVPPQLMGIIPNNTGGFGDVEKAAMV 320 (368) Q Consensus 241 ~~~~~g~~n~~~~~~l~~~g~~~g~~~~pl~~~~~d~qf~e~~~~~~~~Ia~~fgVPp~~lg~~~~~~~~~sn~e~~~~~ 320 (368) |++.+|++|.+..++..++|+++|++|+|++.+++|+||+|+++++++|||++|||||+++|+.++++++++|+|++.+. T Consensus 228 ~~~~~g~~n~r~l~l~~p~g~~~gi~~~pis~~~~d~qf~e~k~~s~~eIa~af~VPp~llGi~~~~t~~~~n~e~~~~~ 307 (344) T protein:vir:20 228 MVKSKGRNNFKNLFLYAPQGKADGIKIIPLSEVATKDDFFNIKKASAADLLDAHRIPFQLMGGKPENVGSLGDIEKVAKV 307 (344) T ss_pred HHHhcCCCCccceEEecCCCCccceeEEEcCCChhHHHHHHHHHhhHHHHHHHhCCCHHHhccCCCCCCccccHHHHHHH Confidence 99988876655566677888889999999999999999999999999999999999999999998888899999999999 Q ss_pred HHHHHHHHHHHHHHHHHhhcCcceEeechhhhhcCCh Q lcl|Aclame:pro 321 FARNEVKPLQDRLLAINDWIGDEVVRFAPYALGGHDQ 357 (368) Q Consensus 321 f~~~tl~P~~~~ie~l~~~l~~~~~~F~~~~Llr~D~ 357 (368) |++++|.||+++||++|++|+.++++|+.++|...|+ T Consensus 308 f~~~~l~P~~~~~e~in~~lg~~~i~F~~~~l~~~d~ 344 (344) T protein:vir:20 308 FVRNELIPLQDRIREINGWLGQEVIRFKNYSLDTDND 344 (344) T ss_pred HHHHHHHHHHHHHHHHHHhcCCcccccCccccccCCC Confidence 9999999999999999999999999999999988888 No 8 >protein:vir:5691 Length: 344 # NCBI annotation: gpQ # Family: family:all:196 # MgeID: mge:120 # MgeName: L-413C # Cross-refs: genbank:acc:NP_839850;genbank:gi:30065705;genbank:GeneID:1260599 Probab=100.00 E-value=2.7e-96 Score=544.54 Aligned_cols=344 Identities=59% Similarity=1.049 Sum_probs=320.0 Q ss_pred CCcCCCCccccccccccccccCCCcchhhccccCceEEEECCCceeccChHHHHHHHHHHhccchhcccccHHHHHHHHH Q lcl|Aclame:pro 1 MSRNKTRRAARAASAHVRTANTDAPTEHHTDRAAQAEVFSFGDPVEVLDRRELLDYVECMRMGQWYEPPMPWDGLARSFR 80 (368) Q Consensus 1 m~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~r 80 (368) |||||+++.+.. .+..+..++.+++|+||+|+||++++++++|++|+.+|.|+++|+++..|+.+.| T Consensus 1 ~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~~pp~~~~~la~~~~ 67 (344) T protein:vir:56 1 MSKKKGKTPQPA-------------AKTMTASAPKMEAFTFGEPVPVLDRRDILDYVECISNGRWYEPPVSFTGLAKSLR 67 (344) T ss_pred CCCCCCCCCchh-------------hHHhhcCCCceEEEEcCCceeecCcchhhhHHHhhhcCccccCCCCHHHHHHHHh Confidence 999988543311 1223344566899999999999999999999999999999999999999999999 Q ss_pred hcccccchhhhccchHHhhccCCCCcCHHHHHHHHHhHhhhCCeeEEEEecCCcceEEEEEecccccccccCCCeeEEEe Q lcl|Aclame:pro 81 AAAHHSSAVYVKRNILVSTFIPHPLLSRATFERLVLDWQVFGNAYLERRENVLGGTIRLDTPLAKYVRRGLDLNTYFFVQ 160 (368) Q Consensus 81 ~~~~~~~~~~~~~~~~l~~~~~n~~~~~~~~~~~~~~~ll~Gnay~~i~r~~~G~~~~L~~l~p~~v~~~~~~~~~~~~~ 160 (368) .+++|++++..+++....+++|||+++...|++++.|++++||||++++||..|+|++|+|+++.+|++..+++.||++. T Consensus 68 a~~~h~s~i~~k~n~l~~~~~Pnp~~t~~~f~~~~~d~ll~Gnay~~~~rn~~G~~~~L~pl~~~~v~~~~~~~~~~~~~ 147 (344) T protein:vir:56 68 AAVHHSSPIYVKRNILASTFIPHPWLSQQDFSRFVLDFLVFGNAFLEKRYSTTGKVIRLETSPAKYTRRGVEEDVYWWVP 147 (344) T ss_pred hhhhhCccceehhhhHHhhcCCCCCCCHHHHHHHHHHHHhcCCeEEEEEECCCCcEEEEEEeCCceeEEeecCCEEEEEe Confidence 99999999999999999999999999998889999999999999999999999999999999999999999999999999 Q ss_pred CCceEEEEcCccEEEecCCCCcCCccccchhhHHHHHHHHHHHHHHHHHHHHhccCCCceeEEeCCCCccHHHHHHHHHH Q lcl|Aclame:pro 161 NWQQPYTFAAGSVFHLQEPDINQEVYGLPEYLSALNATWLNESATLFRRRYYKNGSHAGFILYMTDAAQKQEDVDTLREA 240 (368) Q Consensus 161 ~~~~~~~~~~~dviH~r~~~~~~~~~G~spi~~a~~~i~~~~~a~~~~~~~f~ng~~p~gil~~~~~~l~~e~~~~~k~~ 240 (368) .+|..+.|.++||||+|.+++.+++||+|||.++++++.++.++++|+++||+||++|+|||+++++.+++|++++++++ T Consensus 148 ~~g~~~~~~~~dIiHir~~~~~~~~~Gls~~~~a~~si~l~~~a~~~~~~~f~NGa~pg~Il~~~d~~ls~e~~~~lk~~ 227 (344) T protein:vir:56 148 SFNEPTAFAPGSVFHLLEPDINQELYGLPEYLSALNSAWLNESATLFRRKYYENGAHAGYIMYVTDAVQDRNDIEMLREN 227 (344) T ss_pred cCCeEEEEcCccEEEECCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEecCCCCCHHHHHHHHHH Confidence 99999999999999999999999999999999999999999999999999999999999999999888999999999999 Q ss_pred HHHhccccccccccccccCccccccccccccchhhHHHHHHHHHHHHHHHHHHhCCChHHhcccccccccccCHHHHHHH Q lcl|Aclame:pro 241 MKSAKGPGNFRNLFMYAPNGKKDGIQLLPVSEVAAKDEFWNIKNVTRDDQLAAHRVPPQLMGIIPNNTGGFGDVEKAAMV 320 (368) Q Consensus 241 ~~~~~g~~n~~~~~~l~~~g~~~g~~~~pl~~~~~d~qf~e~~~~~~~~Ia~~fgVPp~~lg~~~~~~~~~sn~e~~~~~ 320 (368) |++.+|++|.+..++..++|+++|++|+|++++++|+||+|++++++++||++|||||+++|+.++++++++|+|++.+. T Consensus 228 ~~~~~g~~~~r~l~l~~p~g~~~G~~~~pis~~~~d~qf~e~k~~s~~eIa~afrVPp~llGi~~~~t~~~~n~eq~~~~ 307 (344) T protein:vir:56 228 MVKSKGRNNFKNLFLYAPQGKADGIKIIPLSEVATKDDFFNIKKASAADLLDAHRIPFQLMGGKPENVGSLGDIEKVAKV 307 (344) T ss_pred HHHhcCCCCccceEEecCCCCccceeEEEcCCChHHHHHHHHHHhhHHHHHHHhCCCHHHhccCCCCCCccccHHHHHHH Confidence 99988765544444556888889999999999999999999999999999999999999999998888899999999999 Q ss_pred HHHHHHHHHHHHHHHHHhhcCcceEeechhhhhcCCh Q lcl|Aclame:pro 321 FARNEVKPLQDRLLAINDWIGDEVVRFAPYALGGHDQ 357 (368) Q Consensus 321 f~~~tl~P~~~~ie~l~~~l~~~~~~F~~~~Llr~D~ 357 (368) |+++||.||+++||++|++|+.++++|+.+.|...|. T Consensus 308 f~~~tL~Pl~~~ie~~n~~l~~~~~~F~~y~l~~~~~ 344 (344) T protein:vir:56 308 FVRNELIPLQDRIREINGWIGQEVIRFKNYSLDTDNG 344 (344) T ss_pred HHHHHHHHHHHHHHHHHhhhccccccCCCccccccCC Confidence 9999999999999999999999999999999998887 No 9 >protein:vir:6058 Length: 344 # NCBI annotation: gpQ # Family: family:all:196 # MgeID: mge:126 # MgeName: WPhi # Cross-refs: genbank:acc:NP_878199;genbank:gi:33438898;genbank:GeneID:1457733 Probab=100.00 E-value=3.9e-96 Score=543.63 Aligned_cols=344 Identities=58% Similarity=1.047 Sum_probs=322.6 Q ss_pred CCcCCCCccccccccccccccCCCcchhhccccCceEEEECCCceeccChHHHHHHHHHHhccchhcccccHHHHHHHHH Q lcl|Aclame:pro 1 MSRNKTRRAARAASAHVRTANTDAPTEHHTDRAAQAEVFSFGDPVEVLDRRELLDYVECMRMGQWYEPPMPWDGLARSFR 80 (368) Q Consensus 1 m~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~r 80 (368) |||||+++.+ ...+..+..++.+.+|+||+|+||++++++++|++|+.+|.|+++|+++..|+++.| T Consensus 1 m~~~~~~~~~-------------~~~~~~~~~~~~~~~~~f~~p~~v~~~~~~~~~~~~~~~~~~~~pp~~~~~la~~~~ 67 (344) T protein:vir:60 1 MSKKKGKTLQ-------------PAAKKMTASAPKMEAFTFGEPVPVLDRRDILDYVECISNGRWYEPPISFTGLAKSLR 67 (344) T ss_pred CCcccCCCCC-------------chHHhhcCCcCcEEEEEcCCceeecCCcchhHHHHhhhcCccccCCCCHHHHHHHHH Confidence 9988875432 112233445666899999999999999999999999999999999999999999999 Q ss_pred hcccccchhhhccchHHhhccCCCCcCHHHHHHHHHhHhhhCCeeEEEEecCCcceEEEEEecccccccccCCCeeEEEe Q lcl|Aclame:pro 81 AAAHHSSAVYVKRNILVSTFIPHPLLSRATFERLVLDWQVFGNAYLERRENVLGGTIRLDTPLAKYVRRGLDLNTYFFVQ 160 (368) Q Consensus 81 ~~~~~~~~~~~~~~~~l~~~~~n~~~~~~~~~~~~~~~ll~Gnay~~i~r~~~G~~~~L~~l~p~~v~~~~~~~~~~~~~ 160 (368) .+++|++++..+++....+++|||++++..|+.++.|++++||||++++||..|+|++|+|+++.+|++..+++.||++. T Consensus 68 a~~~h~~~i~~k~n~l~~~~~Pn~~~t~~~f~~~~~d~ll~Gnay~~i~rn~~G~~~~L~~l~~~~vr~~~~~~~~~~v~ 147 (344) T protein:vir:60 68 AAVHHSSPIYVKRNILASTFIPHPWLSQQDFSRFVLDFLVFGNAFLEKRYSTTGKVIRLETSPAKYTRRGVEEDVYWWVP 147 (344) T ss_pred hhhhhccchhhhhhHHHhhccCCCCCCHHHHHHHHHHHHhcCCeEEEEEECCCCcEEEEEEcCcceEEEeecCCeEEEEc Confidence 99999999999999999999999999998889999999999999999999999999999999999999999999999999 Q ss_pred CCceEEEEcCccEEEecCCCCcCCccccchhhHHHHHHHHHHHHHHHHHHHHhccCCCceeEEeCCCCccHHHHHHHHHH Q lcl|Aclame:pro 161 NWQQPYTFAAGSVFHLQEPDINQEVYGLPEYLSALNATWLNESATLFRRRYYKNGSHAGFILYMTDAAQKQEDVDTLREA 240 (368) Q Consensus 161 ~~~~~~~~~~~dviH~r~~~~~~~~~G~spi~~a~~~i~~~~~a~~~~~~~f~ng~~p~gil~~~~~~l~~e~~~~~k~~ 240 (368) .++..+.|+++||||++.+++.+++||+|||.++++++.++.++++|+++||+||++|+|||++++..+++|+++++++. T Consensus 148 ~~~~~~~~~~~eIiHir~~~~~~~~yGlsp~~~a~~si~l~~~a~~~~~~~f~NG~~pg~il~~~~~~ls~e~~~~ik~~ 227 (344) T protein:vir:60 148 SFNEPTAFAPGSVFHLLEPDINQELYGLPEYLSALNSAWLNESATLFRRKYYENGAHAGYIMYVTDAVQDRNDIEMLREN 227 (344) T ss_pred cCCeEEEEcCccEEEEcCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEecCcCCCHHHHHHHHHH Confidence 99999999999999999999999999999999999999999999999999999999999999999888999999999999 Q ss_pred HHHhccccccccccccccCccccccccccccchhhHHHHHHHHHHHHHHHHHHhCCChHHhcccccccccccCHHHHHHH Q lcl|Aclame:pro 241 MKSAKGPGNFRNLFMYAPNGKKDGIQLLPVSEVAAKDEFWNIKNVTRDDQLAAHRVPPQLMGIIPNNTGGFGDVEKAAMV 320 (368) Q Consensus 241 ~~~~~g~~n~~~~~~l~~~g~~~g~~~~pl~~~~~d~qf~e~~~~~~~~Ia~~fgVPp~~lg~~~~~~~~~sn~e~~~~~ 320 (368) |++.+|++|.+.+++..++|+++|++|+|++.+++|+||+|++++++++||++|||||+++|+.++++++|+|+|++.+. T Consensus 228 ~~~~~g~~~~r~~~l~~p~g~~~g~~~~pis~~~~d~qf~e~k~~~~~eIa~af~VPp~llGi~~~~t~~~~n~e~~~~~ 307 (344) T protein:vir:60 228 MVKSKGRNNFKNLFLYAPQGKADGIKIIPLSEVATKDDFFNIKKASAADLLDAHRIPFQLMGGKPENVGSLGDIEKVAKV 307 (344) T ss_pred HHHhcCCCCCcceEEecCCCCccceeEEEcCCChhHHHHHHHHHhhHHHHHHHhCCCHHHhcccCCCCCccccHHHHHHH Confidence 99988877766666777899999999999999999999999999999999999999999999998888899999999999 Q ss_pred HHHHHHHHHHHHHHHHHhhcCcceEeechhhhhcCCh Q lcl|Aclame:pro 321 FARNEVKPLQDRLLAINDWIGDEVVRFAPYALGGHDQ 357 (368) Q Consensus 321 f~~~tl~P~~~~ie~l~~~l~~~~~~F~~~~Llr~D~ 357 (368) |++++|.||+++||++|++|+.+.++|+.++|...|. T Consensus 308 f~~~~L~Pl~~~~e~ln~~lg~~~i~F~~~~l~~~d~ 344 (344) T protein:vir:60 308 FVRNELIPLQDRIREINGWLGQEVIRFKNYSLDTDNG 344 (344) T ss_pred HHHHHHHHHHHHHHHHHHhcCCcccccCccccCCCCC Confidence 9999999999999999999999999999999999998 No 10 >protein:vir:100328 Length: 346 # NCBI annotation: capsid portal protein Q # Family: family:all:196 # MgeID: mge:1484 # MgeName: phi-MhaA1-PHL101 # Cross-refs: genbank:acc:YP_655469;genbank:gi:109289937;genbank:GeneID:4157371 Probab=100.00 E-value=2e-93 Score=528.77 Aligned_cols=342 Identities=56% Similarity=1.001 Sum_probs=315.3 Q ss_pred CCcCCCCccccccccccccccCCCcchhhccccCceEEEECCCceeccChHHHHHHHHHHh-ccchhcccccHHHHHHHH Q lcl|Aclame:pro 1 MSRNKTRRAARAASAHVRTANTDAPTEHHTDRAAQAEVFSFGDPVEVLDRRELLDYVECMR-MGQWYEPPMPWDGLARSF 79 (368) Q Consensus 1 m~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~-~~~~~~~p~~~~~l~~~~ 79 (368) |||+|++.+.. ...+...+.+++|+||+|+|||+++++++|++|+. +|.|+++|+++..|+++. T Consensus 1 m~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~pp~~~~~la~l~ 65 (346) T protein:vir:10 1 MKKQLRKNLTQ---------------NDRLQPQAQTEIFSFGDPIPVLDRADILNYLECSAMYEKWYNPPMSFDGLAKSL 65 (346) T ss_pred CCcccCCCCCc---------------ccccccccCeEEEecCCcceecCchhHHHHHHHhhcCCceEecCCCHHHHHHHH Confidence 99887643331 11122345589999999999999999999999986 688999999999999999 Q ss_pred HhcccccchhhhccchHHhhc-cCCCCcCHHHHHHHHHhHhhhCCeeEEEEecCCcceEEEEEecccccccccCCCeeEE Q lcl|Aclame:pro 80 RAAAHHSSAVYVKRNILVSTF-IPHPLLSRATFERLVLDWQVFGNAYLERRENVLGGTIRLDTPLAKYVRRGLDLNTYFF 158 (368) Q Consensus 80 r~~~~~~~~~~~~~~~~l~~~-~~n~~~~~~~~~~~~~~~ll~Gnay~~i~r~~~G~~~~L~~l~p~~v~~~~~~~~~~~ 158 (368) +.+++|++++..+.+.+...+ .|||+++...|++++.|++++||||++++||..|++++|+|++|.+|++..+.++|++ T Consensus 66 ~~~~~h~~~i~~k~n~l~~l~~~Pn~~~t~~~f~~~~~d~ll~Gnay~~i~r~~~G~~~~L~pl~~~~v~~~~~~~~~~~ 145 (346) T protein:vir:10 66 RSSTHHESAIITKANILLSTCEVDSRYLSRRDLSSFVKDYLVFGNAYFEVVRNRLGQVQRIESPLAKYVRKGLEAGQFYY 145 (346) T ss_pred HhhhhcchhhhhhhhhHHHHHhCCCCCCCHHHHHHHHHHHHhcCCeEEEEEEcCCCcEEEEEEecCCceEEEEcCCeEEE Confidence 999999999999888766655 7999999988888899999999999999999999999999999999999887776533 Q ss_pred --EeCCceEEEEcCccEEEecCCCCcCCccccchhhHHHHHHHHHHHHHHHHHHHHhccCCCceeEEeCCCCccHHHHHH Q lcl|Aclame:pro 159 --VQNWQQPYTFAAGSVFHLQEPDINQEVYGLPEYLSALNATWLNESATLFRRRYYKNGSHAGFILYMTDAAQKQEDVDT 236 (368) Q Consensus 159 --~~~~~~~~~~~~~dviH~r~~~~~~~~~G~spi~~a~~~i~~~~~a~~~~~~~f~ng~~p~gil~~~~~~l~~e~~~~ 236 (368) ...+|+.+.|+++||||+|.+++.+++||+||+..+++++.++.++++|++++|+||++|+|||++++..+++|++++ T Consensus 146 ~~~~~~g~~~~~~~~dIih~r~~~~~~~~~G~~~~~~a~~si~l~~~a~~~~~~~~~NG~~~~~il~~~d~~l~~e~~~~ 225 (346) T protein:vir:10 146 VPQRFDHQEHEFAKGSIYHLLEPDINQDIYGLPQYLSALQSAWLNESATLFRRKYFLNGAHAGFVFYMSDASQKQEDVEN 225 (346) T ss_pred EEEccCCeEEEEecccEEEecCCCCCCCeeeccHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEeCCCCCCHHHHHH Confidence 345788899999999999999998999999999999999999999999999999999999999999988899999999 Q ss_pred HHHHHHHhccccccccccccccCccccccccccccchhhHHHHHHHHHHHHHHHHHHhCCChHHhcccccccccccCHHH Q lcl|Aclame:pro 237 LREAMKSAKGPGNFRNLFMYAPNGKKDGIQLLPVSEVAAKDEFWNIKNVTRDDQLAAHRVPPQLMGIIPNNTGGFGDVEK 316 (368) Q Consensus 237 ~k~~~~~~~g~~n~~~~~~l~~~g~~~g~~~~pl~~~~~d~qf~e~~~~~~~~Ia~~fgVPp~~lg~~~~~~~~~sn~e~ 316 (368) ++++|++.+|++|+++++++.++|+++|++++|++.+++|+||+|++++++++||++|||||.+||+.++++++++|+|+ T Consensus 226 i~~~~~~~~g~~n~~~~~vl~~~~~~~gi~~~pis~~~~d~qf~e~k~~~~~~I~~af~VPp~llG~~~~~~~~~s~~e~ 305 (346) T protein:vir:10 226 IRQQLKQSKGVGNFKNLFVHAPNGKKDGIQIIPIADVSAKDEFFNIKNVSRDDVLAAHRVPPQLMGIIPNNTGGFGNVAD 305 (346) T ss_pred HHHHHHHhcCccccCceeEecCCCCccceeEEecCCChhHHHHHHHHHHhHHHHHHHhCCCHHHhcccCCCCCCcccHHH Confidence 99999999999999999999999999999999999999999999999999999999999999999999988889999999 Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCcceEeechhhhhcCCh Q lcl|Aclame:pro 317 AAMVFARNEVKPLQDRLLAINDWIGDEVVRFAPYALGGHDQ 357 (368) Q Consensus 317 ~~~~f~~~tl~P~~~~ie~l~~~l~~~~~~F~~~~Llr~D~ 357 (368) +.+.|++++|.|++++||++|++|+.++++||.++|||+|+ T Consensus 306 ~~~~f~~~~l~P~~~~iee~n~~L~~e~i~F~~~~ll~~~~ 346 (346) T protein:vir:10 306 AAEVFFITEIEPLQERLKEFNQWLGQEVIKFKPSKLLQRTQ 346 (346) T ss_pred HHHHHHHHHHHHHHHHHHHHHhhcccceeeechhhhcccCC Confidence 99999999999999999999999999999999999999999 No 11 >protein:vir:267 Length: 348 # NCBI annotation: putative capsid portal protein # Family: family:all:196 # MgeID: mge:7 # MgeName: K139 # Cross-refs: genbank:acc:NP_536647;genbank:gi:17975125;genbank:GeneID:929081 Probab=100.00 E-value=1.6e-90 Score=512.83 Aligned_cols=340 Identities=31% Similarity=0.515 Sum_probs=306.6 Q ss_pred CCcCCCCccccccccccccccCCCcchhhccccCceEEEECC-CceeccChHHHHHHHHHHhcc--chhcccccHHHHHH Q lcl|Aclame:pro 1 MSRNKTRRAARAASAHVRTANTDAPTEHHTDRAAQAEVFSFG-DPVEVLDRRELLDYVECMRMG--QWYEPPMPWDGLAR 77 (368) Q Consensus 1 m~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~p~~~~~~~~~~~~~~~~~~~--~~~~~p~~~~~l~~ 77 (368) |++... .......+.+.++|||| +|+||++.+++++|++||+++ .|+++|+++..|++ T Consensus 1 ~~~~~~-------------------~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~epp~~~~~La~ 61 (348) T protein:vir:26 1 MTEQLI-------------------HSHTTDGTESKSVYSFDPNPEPVDTNSWMTRYCELFYNDFDDYWEPPISLKGLAE 61 (348) T ss_pred CCcccc-------------------chhhccccCCceEEEecCCCeeecCcchHHHHHHHHhcCCCccccCCCCHHHHHH Confidence 663332 11222334457899999 899999999999999999975 89999999999999 Q ss_pred HHHhcccccchhhhccchHHhhccCCCCcCHHHHHHHHHhHhhhCCeeEEEEecCCcceEEEEEecccccccccCCCeeE Q lcl|Aclame:pro 78 SFRAAAHHSSAVYVKRNILVSTFIPHPLLSRATFERLVLDWQVFGNAYLERRENVLGGTIRLDTPLAKYVRRGLDLNTYF 157 (368) Q Consensus 78 ~~r~~~~~~~~~~~~~~~~l~~~~~n~~~~~~~~~~~~~~~ll~Gnay~~i~r~~~G~~~~L~~l~p~~v~~~~~~~~~~ 157 (368) +.+.+++|++++..+++..+.++.|||++++..|++++.+++++||||++++||..|+|++|+|+++.+|++..+++ || T Consensus 62 l~~~n~~h~~~i~~k~N~l~~~~~Pn~~~t~~~f~~~~~d~ll~Gnay~~~~rn~~G~~~~L~~l~~~~v~~~~d~~-~~ 140 (348) T protein:vir:26 62 IANANGYHGSLLKARANYVAGRFMNGGGLPMYKMNSACWDYFGLGMSAFVKIRSYLKNVIALEPLPMVHMRKRKNGD-FV 140 (348) T ss_pred HHhhhhhhhhhHhhhhhHHhhcccCCCCCCHHHHHHHHHHHHhcCCeEEEEEEcCCCcEEEEEEecCceeEeeecCc-EE Confidence 99999999999999999999999999999998888899999999999999999999999999999999999987766 55 Q ss_pred EEeCCceEEEEcCccEEEecCCCCcCCccccchhhHHHHHHHHHHHHHHHHHHHHhccCCCceeEEeCCCCccHHHHHHH Q lcl|Aclame:pro 158 FVQNWQQPYTFAAGSVFHLQEPDINQEVYGLPEYLSALNATWLNESATLFRRRYYKNGSHAGFILYMTDAAQKQEDVDTL 237 (368) Q Consensus 158 ~~~~~~~~~~~~~~dviH~r~~~~~~~~~G~spi~~a~~~i~~~~~a~~~~~~~f~ng~~p~gil~~~~~~l~~e~~~~~ 237 (368) ++..+++.+.|.++||||||.+++.+++||+||+.++++++.++.++++|+++||+||++|++||+++++.+++|+++++ T Consensus 141 ~~~~~g~~~~f~~~dIiHir~~~~~~~~~Gls~~~~a~~si~l~~~a~~~~~~~f~NGa~pg~Il~~~~~~ls~e~~~~l 220 (348) T protein:vir:26 141 QLLRNNEQKVFKAKDVIFIPQYDPQQQIYGLPDYLGSIQSSLLNRDATLFRRRYYLNGAHMGFIFYATDPNLSEADEKAL 220 (348) T ss_pred EEEecCeEEEEcCccEEEEcCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEecCCCCCHHHHHHH Confidence 56667888999999999999999999999999999999999999999999999999999999999999888999999999 Q ss_pred HHHHHHhccccccccccccccCccccccccccccchhhHHHHHHHHHHHHHHHHHHhCCChHHhcccccccccccCHHHH Q lcl|Aclame:pro 238 REAMKSAKGPGNFRNLFMYAPNGKKDGIQLLPVSEVAAKDEFWNIKNVTRDDQLAAHRVPPQLMGIIPNNTGGFGDVEKA 317 (368) Q Consensus 238 k~~~~~~~g~~n~~~~~~l~~~g~~~g~~~~pl~~~~~d~qf~e~~~~~~~~Ia~~fgVPp~~lg~~~~~~~~~sn~e~~ 317 (368) |+.|++.+|++|+++++++.++|+++|++|+|++++++|+||+|++++++++||++|||||+++|+.+.++++|+|+|++ T Consensus 221 k~~~~~~~G~~n~~~~~vl~~~g~~~Gi~~~pis~~~~d~qf~e~k~~t~~dIa~af~VPp~llGi~~~~~~~~sn~e~~ 300 (348) T protein:vir:26 221 KEKIASSKGIGNFRSMFVNIPNGKEKGIQLIPVGDIATKDEFERIKNITAQDIFVGHRFPAGMGGMLPQQGANVPDPLKV 300 (348) T ss_pred HHHHHHhcCcccccceeEEcCCCCccceeEEEccCChhHHHHHHHHHhhHHHHHHHhCCCHHHccccCCCCCccccHHHH Confidence 99999999999999999999999999999999999999999999999999999999999999999988888999999999 Q ss_pred HHHHHHHHHHHHHHHHHH-HHhhcCc--c-eEeechhhhhcCChhhhhhhhhhcC Q lcl|Aclame:pro 318 AMVFARNEVKPLQDRLLA-INDWIGD--E-VVRFAPYALGGHDQPAAAPGGQRSA 368 (368) Q Consensus 318 ~~~f~~~tl~P~~~~ie~-l~~~l~~--~-~~~F~~~~Llr~D~~~ra~~~~~~~ 368 (368) .+.|++++|.||+++||+ ||++|+. . +++||++-. +++..++| T Consensus 301 ~~~f~~~~l~P~~~~ie~~ln~~l~~~~~~~~~fdl~~~--------~e~~~~~a 347 (348) T protein:vir:26 301 SQVYDFYEVIPVCKRFMDAVNNDPEIPDNLKLKFNLNPG--------VESANGSA 347 (348) T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhCCCCccEEEEecCcc--------cccchhhc Confidence 999999999999999986 9998752 2 567775421 34444555 No 12 >protein:vir:78749 Length: 337 # NCBI annotation: putative portal protein # Family: family:all:196 # MgeID: mge:1857 # MgeName: phiO18P # Cross-refs: genbank:acc:YP_001285643;genbank:gi:148727149;genbank:GeneID:5220095 Probab=100.00 E-value=2.6e-87 Score=495.31 Aligned_cols=329 Identities=37% Similarity=0.617 Sum_probs=294.9 Q ss_pred CCcCCCCccccccccccccccCCCcchhhccccCceEEEECCCceeccChHHHHHHHHHHhc--cchhcccccHHHHHHH Q lcl|Aclame:pro 1 MSRNKTRRAARAASAHVRTANTDAPTEHHTDRAAQAEVFSFGDPVEVLDRRELLDYVECMRM--GQWYEPPMPWDGLARS 78 (368) Q Consensus 1 m~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~--~~~~~~p~~~~~l~~~ 78 (368) |||+|+++...+ ..++.++|+||+|+||++.+++++|++|+++ |.|+++|+++..|+++ T Consensus 1 m~~~~~~~~~~~-------------------~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~pP~~~~~La~l 61 (337) T protein:vir:78 1 MTKRQQQPAQAA-------------------ASSPRPSVVFSMPEAIDPTAWMTDYTGVFYNPYGEYYQPPIDRKGLAKV 61 (337) T ss_pred CCCcccCccccc-------------------ccCceeEEEecCcccccCcchhHhhhhhhhccCcceecCCCCHHHHHHH Confidence 999988644311 2234689999999999999999999999987 8899999999999999 Q ss_pred HHhcccccchhhhccchHHhhccCCCCcCHHHHHHHHHhHhhhCCeeEEEEecCCcceEEEEEecccccccccCCCeeEE Q lcl|Aclame:pro 79 FRAAAHHSSAVYVKRNILVSTFIPHPLLSRATFERLVLDWQVFGNAYLERRENVLGGTIRLDTPLAKYVRRGLDLNTYFF 158 (368) Q Consensus 79 ~r~~~~~~~~~~~~~~~~l~~~~~n~~~~~~~~~~~~~~~ll~Gnay~~i~r~~~G~~~~L~~l~p~~v~~~~~~~~~~~ 158 (368) .+.+++|.+++..+.|.....+.|. ++++++++.|++++||||++++||+.|+|++|+|+++.+|++..+++.|| T Consensus 62 ~~~~~~h~~~L~~k~N~~~~~f~~~----~~~~~~~~~d~ll~GNay~~~~rn~~G~~~~L~pl~~~~v~~~~d~~~~~- 136 (337) T protein:vir:78 62 ARANAHHGAILMARRNMVAGRFTNQ----RATITAFVHNYLQFGDGGLLKLRNSFGQVVGLHPLSSVYLRRREDGCFVY- 136 (337) T ss_pred hhcchhhhhHHHhhhccccccCcCc----HHHHHHHHHHHHhhCCeEEEEEECCCCcEEEEEEeCCceeEeeeCCeEEE- Confidence 9999999999888777655555443 57899999999999999999999999999999999999999988766554 Q ss_pred EeCCceEEEEcCccEEEecCCCCcCCccccchhhHHHHHHHHHHHHHHHHHHHHhccCCCceeEEeCCCCccHHHHHHHH Q lcl|Aclame:pro 159 VQNWQQPYTFAAGSVFHLQEPDINQEVYGLPEYLSALNATWLNESATLFRRRYYKNGSHAGFILYMTDAAQKQEDVDTLR 238 (368) Q Consensus 159 ~~~~~~~~~~~~~dviH~r~~~~~~~~~G~spi~~a~~~i~~~~~a~~~~~~~f~ng~~p~gil~~~~~~l~~e~~~~~k 238 (368) +..+++.+.|+++||||+|.+++.+++||+||+.++++++.++.++++|+++||+||++|+|||++++..+++|++++++ T Consensus 137 ~~~~~~~~~~~~~eIiHik~~~~~~~~~Gls~~~~a~~si~l~~aa~~~~~~~f~NGa~p~~il~~~~~~l~~e~~~~lk 216 (337) T protein:vir:78 137 LQQGKPNLIYRPDDVIWLAQYDPEQQVYGMPDYLGGLQSALLNQDATLFRRRYFLNGAHMGFIFYATDPNMDDDTEEEMK 216 (337) T ss_pred EEcCCceEEECCccEEEECCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhccCCCceeEEcCCCCCCHHHHHHHH Confidence 45567788999999999999999999999999999999999999999999999999999999999998889999999999 Q ss_pred HHHHHhccccccccccccccCccccccccccccchhhHHHHHHHHHHHHHHHHHHhCCChHHhcccccc-cccccCHHHH Q lcl|Aclame:pro 239 EAMKSAKGPGNFRNLFMYAPNGKKDGIQLLPVSEVAAKDEFWNIKNVTRDDQLAAHRVPPQLMGIIPNN-TGGFGDVEKA 317 (368) Q Consensus 239 ~~~~~~~g~~n~~~~~~l~~~g~~~g~~~~pl~~~~~d~qf~e~~~~~~~~Ia~~fgVPp~~lg~~~~~-~~~~sn~e~~ 317 (368) ++|++.+|++|+++++++.++|+++|++|+|++++++|+||+|++++++++||++|||||+++|+.+++ +++++|+|++ T Consensus 217 ~~~~~~~G~~n~~~~~v~~~~g~~~Gi~~~pis~~~~d~qfle~k~~s~~eIa~a~~VPp~llGi~~~~~~~~~~n~e~~ 296 (337) T protein:vir:78 217 EMIANSKGVGNFRSMFVNIPDGKPDGIKLIPVGDIATKDEFAAIKGITAQDVLTAHRYPPALAGIIPTNGGGGLGDPEKY 296 (337) T ss_pred HHHHHhcCcccccceEEEcCCCCccceeEEEcCCChhHHHHHHHHHHhHHHHHHHhCCCHHHcccccCCCcCccccHHHH Confidence 999999999999999999999999999999999999999999999999999999999999999998764 5789999999 Q ss_pred HHHHHHHHHHHHHHHHHH-HHhhcCcc--e--Eeechhhhh Q lcl|Aclame:pro 318 AMVFARNEVKPLQDRLLA-INDWIGDE--V--VRFAPYALG 353 (368) Q Consensus 318 ~~~f~~~tl~P~~~~ie~-l~~~l~~~--~--~~F~~~~Ll 353 (368) ++.|+++||.||+++||+ +|.+|.+. + ++|+..+|+ T Consensus 297 ~~~f~~~~L~P~~~~ie~~~n~~ll~~~~~~~f~~~~~~~~ 337 (337) T protein:vir:78 297 DATYARNEVLPLCELVQDAINSAGLPRALWVTFRETIGAAV 337 (337) T ss_pred HHHHHHHHHHHHHHHHHHHHhhhcCChhhceeccccccccC Confidence 999999999999999997 55554332 2 566778888 No 13 >protein:vir:3780 Length: 345 # NCBI annotation: orf15 # Family: family:all:196 # MgeID: mge:328 # MgeName: HP2 # Cross-refs: genbank:acc:NP_536820;genbank:gi:17981829;genbank:GeneID:929208 Probab=100.00 E-value=4.7e-86 Score=488.38 Aligned_cols=334 Identities=32% Similarity=0.505 Sum_probs=301.7 Q ss_pred CCcCCCCccccccccccccccCCCcchhhccccCceEEEECCCceeccChHHHHHHHHHHh--ccchhcccccHHHHHHH Q lcl|Aclame:pro 1 MSRNKTRRAARAASAHVRTANTDAPTEHHTDRAAQAEVFSFGDPVEVLDRRELLDYVECMR--MGQWYEPPMPWDGLARS 78 (368) Q Consensus 1 m~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~--~~~~~~~p~~~~~l~~~ 78 (368) |++++.+... . ..+.+..+..+||||+|+++ ++++|.+|+. +|.|+++|+++..|+.+ T Consensus 1 ~~~~~~~~~~---~-------------~~~~~~~~~~~f~~~~~~~~----~~~~y~~~~~~~~~~~~epp~~~~~la~l 60 (345) T protein:vir:37 1 MKTNVKTDNK---K-------------GIVIAPINDRTFSLNEISAS----PALDYVGIGFDENYNCYLPPVNRHALAKL 60 (345) T ss_pred CCCCccccch---h-------------hcccCcceeEEeecCCcccc----cchhhhhhhhcCCccccCCCCCHHHHHHH Confidence 8766542211 0 01122335789999999997 4789999985 67899999999999999 Q ss_pred HHhcccccchhhhccchHHhhccCCCCcCHHHHHHHHHhHhhhCCeeEEEEecCCcceEEEEEecccccccccCCCeeEE Q lcl|Aclame:pro 79 FRAAAHHSSAVYVKRNILVSTFIPHPLLSRATFERLVLDWQVFGNAYLERRENVLGGTIRLDTPLAKYVRRGLDLNTYFF 158 (368) Q Consensus 79 ~r~~~~~~~~~~~~~~~~l~~~~~n~~~~~~~~~~~~~~~ll~Gnay~~i~r~~~G~~~~L~~l~p~~v~~~~~~~~~~~ 158 (368) .|.+++|++++..|++..+.++.|||+++++.|++++.+++++||||++++||..|+|++|+|+++.+|++..+++.++. T Consensus 61 ~~~~~~h~~~i~~k~n~l~~~~~Pn~~lt~~~f~~~~~d~ll~Gnay~~~~rn~~G~~~~L~pl~~~~vr~~~d~~~~~~ 140 (345) T protein:vir:37 61 PHQNAQHGGILHSRANMVSSLYEGGKALSRMDMRALCLNLIQFGDVGLLKVRNGFGQVVRLVPLSSLYLRVRKDGGYSYL 140 (345) T ss_pred hhcccccccceeeechHHHhhccCCCCCCHHHHHHHHHHHHhcCCeEEEEEEcCCCcEEEEEEEcCceeEEEEeCCeeEE Confidence 99999999999999999999999999999988888899999999999999999999999999999999999998887654 Q ss_pred Ee-----CCceEEEEcCccEEEecCCCCcCCccccchhhHHHHHHHHHHHHHHHHHHHHhccCCCceeEEeCCCCccHHH Q lcl|Aclame:pro 159 VQ-----NWQQPYTFAAGSVFHLQEPDINQEVYGLPEYLSALNATWLNESATLFRRRYYKNGSHAGFILYMTDAAQKQED 233 (368) Q Consensus 159 ~~-----~~~~~~~~~~~dviH~r~~~~~~~~~G~spi~~a~~~i~~~~~a~~~~~~~f~ng~~p~gil~~~~~~l~~e~ 233 (368) +. .+|....|+++||||+|.+++.+++||+||+.++++++.++.++++|+++||+||++|+|||+++++.+++|+ T Consensus 141 ~~~~~~~~~g~~~~~~~~dVihir~~~~~~~~~Gls~~~~a~~si~l~~~a~~~~~~~f~NG~~p~~Il~~~d~~l~~e~ 220 (345) T protein:vir:37 141 MKKSLYDTAQEIYRYDAKDIIFIKLYDPMQQVYGSPDYVGGIQSALLNSDATVFRRRYFSNGAHMGFILYSTDPDLTEEM 220 (345) T ss_pred EEEeEecCCceEEEEccccEEEecCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEecCCCCCHHH Confidence 43 3577889999999999999999999999999999999999999999999999999999999999988899999 Q ss_pred HHHHHHHHHHhccccccccccccccCccccccccccccchhhHHHHHHHHHHHHHHHHHHhCCChHHhcccccccccccC Q lcl|Aclame:pro 234 VDTLREAMKSAKGPGNFRNLFMYAPNGKKDGIQLLPVSEVAAKDEFWNIKNVTRDDQLAAHRVPPQLMGIIPNNTGGFGD 313 (368) Q Consensus 234 ~~~~k~~~~~~~g~~n~~~~~~l~~~g~~~g~~~~pl~~~~~d~qf~e~~~~~~~~Ia~~fgVPp~~lg~~~~~~~~~sn 313 (368) +++++++|++++|.+|+++++++.++|+++|++|+|++++++|+||+|++++++++||++|||||+++|+.++++++++| T Consensus 221 ~~~lk~~~~~~~g~~n~~~~~i~~p~g~~~G~~~~pls~~~~d~qf~e~k~~~~~dIa~a~~VPp~llGi~~~~~~~~~~ 300 (345) T protein:vir:37 221 EEEIARKISESKGVGNFRSMFVNIANGHPDGLKVIPIGDTGTKDEFANIKNISAQDVLTAHRFPAGLSGIIPTNTGGLGD 300 (345) T ss_pred HHHHHHHHHHhcCcccccceEEEcCCCcccceEEEEccCChhHHHHHHHHHHhHHHHHHHhCCCHHHhCccCCCCCCccc Confidence 99999999999999999999999999999999999999999999999999999999999999999999999888889999 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhc----CcceEeechhhhhc Q lcl|Aclame:pro 314 VEKAAMVFARNEVKPLQDRLLAINDWI----GDEVVRFAPYALGG 354 (368) Q Consensus 314 ~e~~~~~f~~~tl~P~~~~ie~l~~~l----~~~~~~F~~~~Llr 354 (368) +|++.+.|++++|.|++++||+.++++ +..+++|+.++|.+ T Consensus 301 ~e~~~~~f~~~~l~P~~~~ie~~ln~~~~~~~~~~i~F~~~~L~~ 345 (345) T protein:vir:37 301 PLKYREVYHYDEVMPLQEIIAETINQDPEIKNLLKIKFREQNFAK 345 (345) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCcceEEecchhhcC Confidence 999999999999999999999754444 23579999999988 No 14 >protein:vir:3743 Length: 345 # NCBI annotation: orf15 # Family: family:all:196 # MgeID: mge:79 # MgeName: HP1 # Cross-refs: genbank:acc:NP_043484;genbank:gi:9628619;genbank:GeneID:1261113 Probab=100.00 E-value=1.6e-85 Score=485.52 Aligned_cols=334 Identities=32% Similarity=0.514 Sum_probs=300.8 Q ss_pred CCcCCCCccccccccccccccCCCcchhhccccCceEEEECCCceeccChHHHHHHHHHHh--ccchhcccccHHHHHHH Q lcl|Aclame:pro 1 MSRNKTRRAARAASAHVRTANTDAPTEHHTDRAAQAEVFSFGDPVEVLDRRELLDYVECMR--MGQWYEPPMPWDGLARS 78 (368) Q Consensus 1 m~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~--~~~~~~~p~~~~~l~~~ 78 (368) |+|+|..-.. .. .+....+..+|+||+|++ .++++|.+|+. +|.|+++|+++..|+.+ T Consensus 1 ~~~~~~~~~~--------~~--------~~~~~~~~~~~~~~~~~~----~~~~~y~~~~~~~~~~~~epp~~~~~la~~ 60 (345) T protein:vir:37 1 MKTNVKTDNK--------KG--------IVIAPINDRTFSLSEITA----SPALDYVGIGFDENYNCYLPPVNRHALAKL 60 (345) T ss_pred CCccccccch--------hh--------hcCCCceEEEeecCCccc----chhhcccceeeecCCccccCCCCHHHHHHH Confidence 8877652211 00 111223468899999986 46889999985 57899999999999999 Q ss_pred HHhcccccchhhhccchHHhhccCCCCcCHHHHHHHHHhHhhhCCeeEEEEecCCcceEEEEEecccccccccCCCeeEE Q lcl|Aclame:pro 79 FRAAAHHSSAVYVKRNILVSTFIPHPLLSRATFERLVLDWQVFGNAYLERRENVLGGTIRLDTPLAKYVRRGLDLNTYFF 158 (368) Q Consensus 79 ~r~~~~~~~~~~~~~~~~l~~~~~n~~~~~~~~~~~~~~~ll~Gnay~~i~r~~~G~~~~L~~l~p~~v~~~~~~~~~~~ 158 (368) .|.+++|++++..|++.++.++.|||+++.+.|++++.|++++||||++++||+.|++++|+|++|.+|++..+++.+++ T Consensus 61 ~~~~~~h~~~i~~k~n~l~~~~~Pn~~~t~~~f~~~v~d~ll~Gnay~~i~rn~~G~~~~L~pl~~~~vr~~~d~~~~~~ 140 (345) T protein:vir:37 61 PHQNAQHGGILHSRANMVSATYEGGKALSKMEMRALCLNLIQFGDVGLLKVRNGFGQVVRLVPLSSLYLRVHKDGGYSYL 140 (345) T ss_pred hhcchhhcchhhhhhhHHhhccCCCCCCCHHHHHHHHHHHHhcCCeEEEEEECCCCCEEEEEEecCceeEEeecCCeeEE Confidence 99999999999999999999999999999988888999999999999999999999999999999999999988887655 Q ss_pred Ee-----CCceEEEEcCccEEEecCCCCcCCccccchhhHHHHHHHHHHHHHHHHHHHHhccCCCceeEEeCCCCccHHH Q lcl|Aclame:pro 159 VQ-----NWQQPYTFAAGSVFHLQEPDINQEVYGLPEYLSALNATWLNESATLFRRRYYKNGSHAGFILYMTDAAQKQED 233 (368) Q Consensus 159 ~~-----~~~~~~~~~~~dviH~r~~~~~~~~~G~spi~~a~~~i~~~~~a~~~~~~~f~ng~~p~gil~~~~~~l~~e~ 233 (368) +. .+|+..+|+++||||||.+++.+++||+||+..+++++.++.++++|+++||+||++|+|||+++++.+++|+ T Consensus 141 ~~~~~~~~~g~~~~~~~~eViHir~~~~~~~~~Gl~~~~~a~~si~l~~~a~~~~~~~f~NGa~~~~Il~~t~~~l~~e~ 220 (345) T protein:vir:37 141 MKKSLYDTAQEIYRYDAKDIIFIKLYDPMQQVYGSPDYVGGIQSALLNSDATVFRRRYFSNGAHMGFILYSTDPDLTEEM 220 (345) T ss_pred EeeeeeccCceEEEEccccEEEEcCCCCCCCcccchHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEeCCCCCCHHH Confidence 43 3577889999999999999999999999999999999999999999999999999999999999988899999 Q ss_pred HHHHHHHHHHhccccccccccccccCccccccccccccchhhHHHHHHHHHHHHHHHHHHhCCChHHhcccccccccccC Q lcl|Aclame:pro 234 VDTLREAMKSAKGPGNFRNLFMYAPNGKKDGIQLLPVSEVAAKDEFWNIKNVTRDDQLAAHRVPPQLMGIIPNNTGGFGD 313 (368) Q Consensus 234 ~~~~k~~~~~~~g~~n~~~~~~l~~~g~~~g~~~~pl~~~~~d~qf~e~~~~~~~~Ia~~fgVPp~~lg~~~~~~~~~sn 313 (368) +++++++|++.+|++|.++++++.++|+++|++|+|++.+++|+||+|++++++++||++|||||.++|+.++++++++| T Consensus 221 ~~~lk~~~~~~~g~~n~~~~~i~~~~g~~~G~~~~pl~~~~~d~qf~e~k~~~~~dI~~a~~VPp~liGi~~~~t~~~s~ 300 (345) T protein:vir:37 221 EEEIARKISESKGVGNFRSMFVNIAGGHPDGLKVIPIGDTGTKDEFANIKNISAQDVLTAHRFPAGLSGIIPTNTGGLGD 300 (345) T ss_pred HHHHHHHHHHhcCccccCceeEecCCCCccceeEEEccCChhHHHHHHHHHHhHHHHHHHhCCCHHHhccccCCCCCccc Confidence 99999999999999999999999999999999999999999999999999999999999999999999999888889999 Q ss_pred HHHHHHHHHHHHHHHHHHHHHH-HHhhc---CcceEeechhhhhc Q lcl|Aclame:pro 314 VEKAAMVFARNEVKPLQDRLLA-INDWI---GDEVVRFAPYALGG 354 (368) Q Consensus 314 ~e~~~~~f~~~tl~P~~~~ie~-l~~~l---~~~~~~F~~~~Llr 354 (368) +|++.+.|+++||.||+++||+ +|+.+ +..+++||.++|+| T Consensus 301 ~e~~~~~f~~~~l~P~~~~ie~~ln~~~e~~~~~~i~F~~~~l~k 345 (345) T protein:vir:37 301 PLKYREVYHYDEVMPLQEIIAETINQDPEIKNLLKIKFREQNFAK 345 (345) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhhccCCcceEEECchhhcC Confidence 9999999999999999999997 55432 33579999999999 No 15 >protein:vir:1884 Length: 424 # NCBI annotation: head portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:41 # MgeName: HK022 # Cross-refs: genbank:acc:NP_037664;genbank:gi:9634122;genbank:GeneID:1262519 Probab=100.00 E-value=2.7e-74 Score=423.92 Aligned_cols=349 Identities=15% Similarity=0.186 Sum_probs=276.5 Q ss_pred CCcCCCCccccccccccccccCCCcchhhccccCceEEEECCCceeccChHHHHHHHHHHhccchhcccccHHHHHHHHH Q lcl|Aclame:pro 1 MSRNKTRRAARAASAHVRTANTDAPTEHHTDRAAQAEVFSFGDPVEVLDRRELLDYVECMRMGQWYEPPMPWDGLARSFR 80 (368) Q Consensus 1 m~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~r 80 (368) .++-|+....+....+.+.+ ...+. ......+...+ .+..++...+|+.|+.++. .+++..|+.+ ++ T Consensus 17 ~~~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~v---~~~~al~~~~v~~cv~~Ia-~~iA~lp~~~------~~ 83 (424) T protein:vir:18 17 WARLQSWFVGGRLVTPNQGS-QTGPV--SAHGHLGDSSI---NDERILQISTVWRCVSLIS-TLTACLPLDV------FE 83 (424) T ss_pred HHHHHhhhcccccccccccc-ccccc--ccccccccccc---cHHHhhccHHHHHHHHHHH-HhhccCceEE------EE Confidence 22112111111001011100 00000 00000011111 2445566677777777664 6688888753 34 Q ss_pred hcccccc-hhhhccchH-HhhccCCCCcCH-HHHHHHHHhHhhhCCeeEEEEecCCcceEEEEEecccccccccCCCe-e Q lcl|Aclame:pro 81 AAAHHSS-AVYVKRNIL-VSTFIPHPLLSR-ATFERLVLDWQVFGNAYLERRENVLGGTIRLDTPLAKYVRRGLDLNT-Y 156 (368) Q Consensus 81 ~~~~~~~-~~~~~~~~~-l~~~~~n~~~~~-~~~~~~~~~~ll~Gnay~~i~r~~~G~~~~L~~l~p~~v~~~~~~~~-~ 156 (368) ....+++ .+..+|+.. ++...||++++. +||+.++.+++++||||++|.|+..|+|++|+|++|.+|++..+++. + T Consensus 84 ~~~~~~~~~~~~~~~l~~lL~~~PN~~~t~~~f~~~~~~~lll~Gnay~~i~r~~~G~~~~L~pl~~~~V~v~~~~~~~~ 163 (424) T protein:vir:18 84 TDQNDNRKKVDLSNPLARLLRYSPNQYMTAQEFREAMTMQLCFYGNAYALVDRNSAGDVISLLPLQSANMDVKLVGKKVV 163 (424) T ss_pred eecCCceeeeccccHHHHHHhhccCCCCCHHHHHHHHHHHHhhcCCeEEEEEECCCCcEEEEEEecCcceEEEEcCCeEE Confidence 4433333 334466644 455689998875 78899999999999999999999999999999999999999776554 5 Q ss_pred EEEeCCceEEEEcCccEEEecCCCCcCCccccchhhHHHHHHHHHHHHHHHHHHHHhccCCCceeEEeCCCCccHHHHHH Q lcl|Aclame:pro 157 FFVQNWQQPYTFAAGSVFHLQEPDINQEVYGLPEYLSALNATWLNESATLFRRRYYKNGSHAGFILYMTDAAQKQEDVDT 236 (368) Q Consensus 157 ~~~~~~~~~~~~~~~dviH~r~~~~~~~~~G~spi~~a~~~i~~~~~a~~~~~~~f~ng~~p~gil~~~~~~l~~e~~~~ 236 (368) |.+..+|+...|+++||||||++++ ++++|+||+.+++++|+++.++++|..++|+||++|+|||++++..++++++++ T Consensus 164 y~~~~~g~~~~~~~~eIih~r~~~~-dg~~G~spi~~~~~~i~~~~a~~~~~~~~f~ng~~p~gil~~~~~~l~~e~~~~ 242 (424) T protein:vir:18 164 YRYQRDSEYADFSQKEIFHLKGFGF-TGLVGLSPIAFACKSAGVAVAMEDQQRDFFANGAKSPQILSTGEKVLTEQQRSQ 242 (424) T ss_pred EEEEeCCeEEEeccccEEEecCcCC-CCcccccHHHHHHHHHHHHHHHHHHHHHHHHccCCcceEEEeCCcCCCHHHHHH Confidence 6777888889999999999998875 789999999999999999999999999999999999999999877789999999 Q ss_pred HHHHHHHhccccccccccccccCccccccccccccchhhHHHHHHHHHHHHHHHHHHhCCChHHhcccccccccccCHHH Q lcl|Aclame:pro 237 LREAMKSAKGPGNFRNLFMYAPNGKKDGIQLLPVSEVAAKDEFWNIKNVTRDDQLAAHRVPPQLMGIIPNNTGGFGDVEK 316 (368) Q Consensus 237 ~k~~~~~~~g~~n~~~~~~l~~~g~~~g~~~~pl~~~~~d~qf~e~~~~~~~~Ia~~fgVPp~~lg~~~~~~~~~sn~e~ 316 (368) +++.|++.+|+.|+|++++| +.|++|++++++++|+||+|++++++++||++|||||++||+.++++.+++|+|| T Consensus 243 ~~~~~~~~~~g~nag~~~vl-----~~g~~~~~l~~~~~d~q~le~~~~~~~~Ia~~fgVPp~~lg~~~~~t~~~sn~eq 317 (424) T protein:vir:18 243 VEENFKEIAGGPVKKRLWIL-----EAGFSTSAIGVTPQDAEMMASRKFQVSELARFFGVPPHLVGDVEKSTSWGSGIEQ 317 (424) T ss_pred HHHHHHHHhCCcccCCceec-----cCCceEEecCCChhHHHHHHHHHHHHHHHHHHhCCCHHHhCCCCCcccccccHHH Confidence 99999998888999999998 6789999999999999999999999999999999999999999887778899999 Q ss_pred HHHHHHHHHHHHHHHHHH-HHHhhcCcc------eEeechhhhhcCChhhhhhhhhhcC Q lcl|Aclame:pro 317 AAMVFARNEVKPLQDRLL-AINDWIGDE------VVRFAPYALGGHDQPAAAPGGQRSA 368 (368) Q Consensus 317 ~~~~f~~~tl~P~~~~ie-~l~~~l~~~------~~~F~~~~Llr~D~~~ra~~~~~~~ 368 (368) +.+.|+++||.||+++|| +||++|.+. +++||.++|+|+|.++|++..++.- T Consensus 318 ~~~~f~~~tl~P~~~~ie~~l~~~L~~~~~~~~~~~~fd~~~llr~d~~~r~~~~~~~~ 376 (424) T protein:vir:18 318 QNLGFLQYTLQPYISRWENSIQRWLIPAKDVGRIHAEHNLDGLLRGDSASRAAFMKAMG 376 (424) T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCccccCCeEEEEechhhhccCHHHHHHHHHHHH Confidence 999999999999999998 599887432 5999999999999999999877764 No 16 >protein:vir:189 Length: 424 # NCBI annotation: portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:6 # MgeName: HK97 # Cross-refs: genbank:acc:NP_037699;genbank:gi:9634156;genbank:GeneID:1262529 Probab=100.00 E-value=8.1e-74 Score=421.28 Aligned_cols=344 Identities=15% Similarity=0.185 Sum_probs=275.8 Q ss_pred CCcCCCCccccccccccccccCCCcchhhccccCceEE--EECCC---ceeccChHHHHHHHHHHhccchhcccccHHHH Q lcl|Aclame:pro 1 MSRNKTRRAARAASAHVRTANTDAPTEHHTDRAAQAEV--FSFGD---PVEVLDRRELLDYVECMRMGQWYEPPMPWDGL 75 (368) Q Consensus 1 m~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~g~---p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l 75 (368) +++-|+-..++. ...+..+.. .++..+ +-.|. +...+...+++.|+.++. .+++..|+.+ T Consensus 17 ~~~~~~~f~~~~-----~~~~~~~~~------~~~~~~~~~~~~~~v~~~~al~~~~v~~cv~~Ia-~~iA~lp~~v--- 81 (424) T protein:vir:18 17 WARLKSWFVGGR-----LVTPNQGSQ------TGPVSAHGYLGDSSINDERILQISTVWRCVSLIS-TLTACLPLDV--- 81 (424) T ss_pred HHHHHhhccccc-----cccccchhh------ccccccccccccccccHHHhhccHHHHHHHHHHH-HhhccCceEE--- Confidence 333232211111 111111100 001111 11111 334455566777776654 5678888753 Q ss_pred HHHHHhcccccc-hhhhccch-HHhhccCCCCcCH-HHHHHHHHhHhhhCCeeEEEEecCCcceEEEEEecccccccccC Q lcl|Aclame:pro 76 ARSFRAAAHHSS-AVYVKRNI-LVSTFIPHPLLSR-ATFERLVLDWQVFGNAYLERRENVLGGTIRLDTPLAKYVRRGLD 152 (368) Q Consensus 76 ~~~~r~~~~~~~-~~~~~~~~-~l~~~~~n~~~~~-~~~~~~~~~~ll~Gnay~~i~r~~~G~~~~L~~l~p~~v~~~~~ 152 (368) ++....++. .+..+|+. .++...|||+++. +||+.++.+++++||||++|+|+..|++++|+|++|.+|++..+ T Consensus 82 ---y~~~~~~~~~~~~~~~~l~~lL~~~PN~~~t~~~f~~~~~~~lll~Gnay~~i~r~~~G~~~~L~~l~~~~v~v~~~ 158 (424) T protein:vir:18 82 ---FETDQNDNRKKVDLSNPLARLLRYSPNQYMTAQEFREAMTMQLCFYGNAYALVDRNSAGDVISLLPLQSANMDVKLV 158 (424) T ss_pred ---EEeccCCceeeeccccHHHHHHhhccCCCCCHHHHHHHHHHHHhhcCCeEEEEEECCCCcEEEEEEecCcceEEEEc Confidence 344433333 33345664 3555689998775 78899999999999999999999999999999999999999876 Q ss_pred CC-eeEEEeCCceEEEEcCccEEEecCCCCcCCccccchhhHHHHHHHHHHHHHHHHHHHHhccCCCceeEEeCCCCccH Q lcl|Aclame:pro 153 LN-TYFFVQNWQQPYTFAAGSVFHLQEPDINQEVYGLPEYLSALNATWLNESATLFRRRYYKNGSHAGFILYMTDAAQKQ 231 (368) Q Consensus 153 ~~-~~~~~~~~~~~~~~~~~dviH~r~~~~~~~~~G~spi~~a~~~i~~~~~a~~~~~~~f~ng~~p~gil~~~~~~l~~ 231 (368) ++ .+|.+..+|+...|+++||||+|+++. ++++|+||+..++++|+++.++++|..++|+||++|+|||++++..+++ T Consensus 159 ~~~~~y~~~~~g~~~~~~~~eVihir~~~~-dg~~G~spi~~~~~~i~~~~~~~~~~~~~f~ng~~~~gil~~~~~~l~~ 237 (424) T protein:vir:18 159 GKKVVYRYQRDSEYADFSQKEIFHLKGFGF-TGLVGLSPIAFACKSAGVAVAMEDQQRDFFANGAKSPQILSTGEKVLTE 237 (424) T ss_pred CCeEEEEEEeCCeEEEeccccEEEecCcCC-CCcccccHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEeCCcCCCH Confidence 55 457777888889999999999998874 7899999999999999999999999999999999999999998777899 Q ss_pred HHHHHHHHHHHHhccccccccccccccCccccccccccccchhhHHHHHHHHHHHHHHHHHHhCCChHHhcccccccccc Q lcl|Aclame:pro 232 EDVDTLREAMKSAKGPGNFRNLFMYAPNGKKDGIQLLPVSEVAAKDEFWNIKNVTRDDQLAAHRVPPQLMGIIPNNTGGF 311 (368) Q Consensus 232 e~~~~~k~~~~~~~g~~n~~~~~~l~~~g~~~g~~~~pl~~~~~d~qf~e~~~~~~~~Ia~~fgVPp~~lg~~~~~~~~~ 311 (368) |+++++++.|++.+|+.|+|++++| +.|++|++++++++|+||+|++++++++||++|||||++||+.++++.++ T Consensus 238 e~~~~~~~~~~~~~~~~nag~~~vl-----~~g~~~~~l~~~~~d~q~~e~~~~~~~~Ia~~fgVPp~~lg~~~~~t~~~ 312 (424) T protein:vir:18 238 QQRSQVEENFKEIAGGPVKKRLWIL-----EAGFSTSAIGVTPQDAEMMASRKFQVSELARFFGVPPHLVGDVEKSTSWG 312 (424) T ss_pred HHHHHHHHHHHHHhCCcccCCceec-----cCCceEEecCCChhHHHHHHHHHHhHHHHHHHhCCCHHHhCCCCCccccc Confidence 9999999999998999999999998 67899999999999999999999999999999999999999998887888 Q ss_pred cCHHHHHHHHHHHHHHHHHHHHH-HHHhhcCcc------eEeechhhhhcCChhhhhhhhhhcC Q lcl|Aclame:pro 312 GDVEKAAMVFARNEVKPLQDRLL-AINDWIGDE------VVRFAPYALGGHDQPAAAPGGQRSA 368 (368) Q Consensus 312 sn~e~~~~~f~~~tl~P~~~~ie-~l~~~l~~~------~~~F~~~~Llr~D~~~ra~~~~~~~ 368 (368) +|+||+.+.|+++||.||+++|| +||++|.+. +++||.++|+|+|.++|++..++.- T Consensus 313 sn~eq~~~~f~~~tl~P~~~~ie~~ln~~L~~~~~~~~~~~~fd~~~llr~d~~~r~~~~~~~~ 376 (424) T protein:vir:18 313 SGIEQQNLGFLQYTLQPYISRWENSIQRWLIPSKDVGRLHAEHNLDGLLRGDSASRAAFMKAMG 376 (424) T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccccCCeEEEEechhhhccCHHHHHHHHHHHH Confidence 99999999999999999999998 599887432 6999999999999999999887765 No 17 >protein:vir:100150 Length: 437 # NCBI annotation: gp3 # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:1639 # MgeName: phi1026b # Cross-refs: genbank:acc:NP_945033;genbank:gi:38707893;genbank:GeneID:2744197 Probab=100.00 E-value=1.7e-73 Score=419.51 Aligned_cols=352 Identities=15% Similarity=0.151 Sum_probs=283.8 Q ss_pred CCcCCCCccccccccccccccCCCc--chhhccccCceEEEECCC---ceeccChHHHHHHHHHHhccchhcccccHHHH Q lcl|Aclame:pro 1 MSRNKTRRAARAASAHVRTANTDAP--TEHHTDRAAQAEVFSFGD---PVEVLDRRELLDYVECMRMGQWYEPPMPWDGL 75 (368) Q Consensus 1 m~~~k~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~g~---p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l 75 (368) |+|.|+|...+...+...+-..... ........+... ...|. +.+++...+|+.|+.++. .+++..|+. T Consensus 1 ~~~~~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~~~-~~~g~~v~~~~al~~~~v~~ci~~Ia-~~ia~lp~~---- 74 (437) T protein:vir:10 1 MKQGKQRALGRIKSSFLKWLGVPISLTDGSFWSAWGGMG-SSSGETVTADSALQLSAVWSCVRLIA-ETIATLPLN---- 74 (437) T ss_pred CCcchhhhhhhhHHhhhhhcCCcccCCchhHHHhhcccc-cCCCceechHhhhccHHHHHHHHHHH-HHHhhCcee---- Confidence 9999998888776654443222111 111111111000 01222 334566677777777654 567777865 Q ss_pred HHHHHhcccccchhhhccch-HHhhccCCCCcCH-HHHHHHHHhHhhhCCeeEEEEecCCcceEEEEEecccccccccCC Q lcl|Aclame:pro 76 ARSFRAAAHHSSAVYVKRNI-LVSTFIPHPLLSR-ATFERLVLDWQVFGNAYLERRENVLGGTIRLDTPLAKYVRRGLDL 153 (368) Q Consensus 76 ~~~~r~~~~~~~~~~~~~~~-~l~~~~~n~~~~~-~~~~~~~~~~ll~Gnay~~i~r~~~G~~~~L~~l~p~~v~~~~~~ 153 (368) +++....+...+..+|+. .++...|||+++. +|++.++.+++++||||++|+|+. |++++|+|++|..|++.... T Consensus 75 --~~~~~~~g~~~~~~~~~l~~lL~~~PN~~~t~~~f~~~~~~~lll~Gnay~~i~r~~-g~~~~L~~l~p~~v~i~~~~ 151 (437) T protein:vir:10 75 --LYQTKPDGTRVLAKQHRLYTVIHSQPNAENTAAEFWEVIVASMLLWGNGYARKLRSA-GVLIGLELMLPQRTTVKRLT 151 (437) T ss_pred --EEEEcCCCceeeccccHHHHHhhccCCcCCCHHHHHHHHHHHHhhcCCeEEEEEecC-CcEEEEEEEcCcceEEEECC Confidence 345455555556667764 3455689998875 788899999999999999999995 99999999999999987765 Q ss_pred Ce---eEEEeCCceEEEEcCccEEEecCCCCcCCccccchhhHHHHHHHHHHHHHHHHHHHHhccCCCceeEEeCCCCcc Q lcl|Aclame:pro 154 NT---YFFVQNWQQPYTFAAGSVFHLQEPDINQEVYGLPEYLSALNATWLNESATLFRRRYYKNGSHAGFILYMTDAAQK 230 (368) Q Consensus 154 ~~---~~~~~~~~~~~~~~~~dviH~r~~~~~~~~~G~spi~~a~~~i~~~~~a~~~~~~~f~ng~~p~gil~~~~~~l~ 230 (368) ++ |++...+|....++++||||||.++ .|+++|+||+..++.+|+++.++++|..++|+||++|+|||++++ .++ T Consensus 152 ~g~~~y~~~~~~g~~~~~~~~dIih~r~~~-~d~~~G~spi~~~~~~i~~~~~~~~~~~~~f~ng~~p~gil~~~~-~l~ 229 (437) T protein:vir:10 152 SGALQYTYRNVDGTVSTLAEDDVFHVRGFS-LDGLMGLTPIQYAREVLGNSTAANKTSASVFRNGLRPSGVLSTDQ-ILQ 229 (437) T ss_pred CCeEEEEEEecCceEEEEccccEEEecCcC-CCCcccccHHHHHHHHHHHHHHHHHHHHHHHhccCCccEEEEcCC-CCC Confidence 43 3344567888899999999999887 478999999999999999999999999999999999999999875 689 Q ss_pred HHHHHHHHHHHHHh-ccccccccccccccCccccccccccccchhhHHHHHHHHHHHHHHHHHHhCCChHHhcccccccc Q lcl|Aclame:pro 231 QEDVDTLREAMKSA-KGPGNFRNLFMYAPNGKKDGIQLLPVSEVAAKDEFWNIKNVTRDDQLAAHRVPPQLMGIIPNNTG 309 (368) Q Consensus 231 ~e~~~~~k~~~~~~-~g~~n~~~~~~l~~~g~~~g~~~~pl~~~~~d~qf~e~~~~~~~~Ia~~fgVPp~~lg~~~~~~~ 309 (368) +|+.+++++.|++. .|..|+|+++++ +.|++|+|++++++|+||+|++++++++||++|||||++||+.++++. T Consensus 230 ~e~~~~~~~~~~~~~~g~~nag~~~vl-----~~g~~~~~l~~~~~d~q~~e~~~~~~~~Ia~~fgVPp~~lg~~~~~t~ 304 (437) T protein:vir:10 230 KEKRAEIRTDLAEQFGGAMQAGKTMVL-----EAGMKYQAITMNPGDVQLLETRAFNIEEICRWYRVPPFMVGHSEKSTS 304 (437) T ss_pred HHHHHHHHHHHHHHhcCccccCcceec-----cCCceEEeccCChhhHHHHHHHHHHHHHHHHHhCCCHHHhCCCCCccc Confidence 99999999999875 566899999998 678999999999999999999999999999999999999999888778 Q ss_pred cccCHHHHHHHHHHHHHHHHHHHHH-HHHhhcCc------ceEeechhhhhcCChhhhhhhhhhcC Q lcl|Aclame:pro 310 GFGDVEKAAMVFARNEVKPLQDRLL-AINDWIGD------EVVRFAPYALGGHDQPAAAPGGQRSA 368 (368) Q Consensus 310 ~~sn~e~~~~~f~~~tl~P~~~~ie-~l~~~l~~------~~~~F~~~~Llr~D~~~ra~~~~~~~ 368 (368) +++|+|++.+.|+++||.||+..|| ++|++|.+ .+++||.++|+|+|.++|++..+..- T Consensus 305 ~~sn~e~~~~~f~~~tl~P~~~~ie~~l~~kll~~~e~~~~~~~fd~~~ll~~d~~~r~~~~~~~~ 370 (437) T protein:vir:10 305 WGTGIEQQTLGFLTFTLRPWLTRIEQAARRSLLRPGERDQFYAEFSVEGLLRADSAGRAAFYSTMT 370 (437) T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHHhhccCccccCceEEEEechhhhccCHHHHHHHHHHHH Confidence 8899999999999999999999998 59987743 26999999999999999999876654 No 18 >protein:vir:93610 Length: 454 # NCBI annotation: putative portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:157 # MgeName: phi 4795 # Cross-refs: genbank:acc:YP_001449295;genbank:gi:157166043;interpro:IPR006427;interpro:IPR006944;uniprot:Q6H9U6;genbank:GeneID:5580432 Probab=100.00 E-value=8.3e-73 Score=415.77 Aligned_cols=349 Identities=14% Similarity=0.118 Sum_probs=274.4 Q ss_pred CCcCCCCccccccccccccccCCCcchhhccccCceEEEECCC---ceeccChHHHHHHHHHHhccchhcccccHHHHHH Q lcl|Aclame:pro 1 MSRNKTRRAARAASAHVRTANTDAPTEHHTDRAAQAEVFSFGD---PVEVLDRRELLDYVECMRMGQWYEPPMPWDGLAR 77 (368) Q Consensus 1 m~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~---p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~ 77 (368) +-||..+.++ .+.+. +.+.....-. .... ....+...|. |..++...+|+.|+.++. .+++..|+. T Consensus 4 ~~~~~~~~~~-~~~~~-~~~~~~~~~~-~~~~-~~~g~~~~g~~v~~~~al~~~~V~~~v~~Ia-~~iA~lp~~------ 72 (454) T protein:vir:93 4 LLRRTRKNQK-SGRDV-REAGWTSLFQ-AVAE-PFAGAWQQGVKADPEAVLSFHAVFACISLIS-QDIAKMRLR------ 72 (454) T ss_pred ccccCccccc-ccccc-cchhhhhhhh-hhhh-hhcchhhcCcccChHHhhccHHHHHHHHHHH-HhhccCceE------ Confidence 4544222221 11111 1111110000 0000 0000111122 445566677777776654 678888875 Q ss_pred HHHhcccccchhhhccchHHhhccCCCCcCH-HHHHHHHHhHhhhCCeeEEEEecCCcceEEEEEecccccccccCCC-- Q lcl|Aclame:pro 78 SFRAAAHHSSAVYVKRNILVSTFIPHPLLSR-ATFERLVLDWQVFGNAYLERRENVLGGTIRLDTPLAKYVRRGLDLN-- 154 (368) Q Consensus 78 ~~r~~~~~~~~~~~~~~~~l~~~~~n~~~~~-~~~~~~~~~~ll~Gnay~~i~r~~~G~~~~L~~l~p~~v~~~~~~~-- 154 (368) +++....+.......|+..++...|||+++. +||+.++.+++++||||++|+|+..|++++|+|++|.+|++..+.+ T Consensus 73 ~~~~~~~g~~~~~~~~~~~~L~~~PN~~~t~~~f~~~l~~~lll~Gna~~~i~r~~~G~~~~L~~i~~~~v~v~~~~~g~ 152 (454) T protein:vir:93 73 LMQTDAQGIRRETRRGDIARLCRRPNAQQNRIQFFELWLNAKLRHGNTVVLKIRNARGQIKELRILDWNRVEPLVADDGE 152 (454) T ss_pred EEEeccCCccchhhhHHHHHHHhcCCCCCCHHHHHHHHHHHHhhcCceEEEEEECCCCcEEEEEEEcCcceEEEEcCCCc Confidence 3455555555556667777777899998875 7888999999999999999999999999999999999999876654 Q ss_pred eeEEEeCC-----ceEEEEcCccEEEecCCCCcCCccccchhhHHHHHHHHHHHHHHHHHHHHhccCCCceeEEeCCCCc Q lcl|Aclame:pro 155 TYFFVQNW-----QQPYTFAAGSVFHLQEPDINQEVYGLPEYLSALNATWLNESATLFRRRYYKNGSHAGFILYMTDAAQ 229 (368) Q Consensus 155 ~~~~~~~~-----~~~~~~~~~dviH~r~~~~~~~~~G~spi~~a~~~i~~~~~a~~~~~~~f~ng~~p~gil~~~~~~l 229 (368) .+|.+... +....++++||||||...+.++++|+||+..++++|.++.++++|..++|+||++|+|||++++ .+ T Consensus 153 ~~y~~~~~~~~~~~~~~~~~~~eViH~k~~~~~~~~~G~sp~~~~~~~i~~~~~~~~~~~~~f~ng~~p~gil~~~~-~l 231 (454) T protein:vir:93 153 VFYRITPDRNCGITEAVTVPAREVIHDRFNCFFHPLIGLPPVYAAGLAATQGHHIQENSTSFFRNGGRPSGVIEIPG-SI 231 (454) T ss_pred EEEEEEeccccccceeEEecCcceEEeccCCCCCCceeccHHHHHHHHHHHHHHHHHHHHHHHhccCCccEEEecCC-CC Confidence 34444332 3467899999999997666789999999999999999999999999999999999999999875 68 Q ss_pred cHHHHHHHHHHHHHhccccccccccccccCccccccccccccchhhHHHHHHHHHHHHHHHHHHhCCChHHhcccccccc Q lcl|Aclame:pro 230 KQEDVDTLREAMKSAKGPGNFRNLFMYAPNGKKDGIQLLPVSEVAAKDEFWNIKNVTRDDQLAAHRVPPQLMGIIPNNTG 309 (368) Q Consensus 230 ~~e~~~~~k~~~~~~~g~~n~~~~~~l~~~g~~~g~~~~pl~~~~~d~qf~e~~~~~~~~Ia~~fgVPp~~lg~~~~~~~ 309 (368) ++|+.+++++.|++.+++.|+|++++| +.|++|++++++++|+||+|++++++++||++|||||++||+.++ + T Consensus 232 ~~e~~~~~~~~~~~~~~g~n~g~~~vl-----~~g~~~~~l~~~~~d~q~le~~~~~~~~Ia~~fgVPp~~lg~~~~--~ 304 (454) T protein:vir:93 232 TEENAKKLKSNWDSGYTGENAGKTAIL-----SNGAKYNPTTFSPVDSQTVEQLKMTAEIVCSVFRVPAYKIGVGQP--P 304 (454) T ss_pred CHHHHHHHHHHHHHHhcccccCCceec-----cCCceEEEcccChhHHHHHHHHHHHHHHHHHHhCCCHHHcCCCCC--C Confidence 999999999999998888999999998 678999999999999999999999999999999999999998765 6 Q ss_pred cccCHHHHHHHHHHHHHHHHHHHHH-HHHhhcCc---ceEeechhhhhcCChhhhhhhhhhcC Q lcl|Aclame:pro 310 GFGDVEKAAMVFARNEVKPLQDRLL-AINDWIGD---EVVRFAPYALGGHDQPAAAPGGQRSA 368 (368) Q Consensus 310 ~~sn~e~~~~~f~~~tl~P~~~~ie-~l~~~l~~---~~~~F~~~~Llr~D~~~ra~~~~~~~ 368 (368) +++|+|++.+.|+++||.||++.|| ++|++|.. .+++||.++|+++|.++|++..++.. T Consensus 305 t~sn~e~~~~~f~~~~l~P~~~~ie~~ln~~L~~~~~~~~~f~~~~ll~~D~~~r~~~~~~~~ 367 (454) T protein:vir:93 305 SSDNVEALEQQYYSQCLQTLIESIELLLDEALETGENESTEFDVTTLLRMDSERRMKTLGDAV 367 (454) T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCcEEEeechhhhccCHHHHHHHHHHHH Confidence 8999999999999999999999998 59998853 36999999999999999998876654 No 19 >protein:vir:100249 Length: 431 # NCBI annotation: gp78 # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:1619 # MgeName: Bcep176 # Cross-refs: genbank:acc:YP_355414;genbank:gi:77864704;genbank:GeneID:3725971 Probab=100.00 E-value=1e-72 Score=415.21 Aligned_cols=346 Identities=17% Similarity=0.119 Sum_probs=265.7 Q ss_pred CC---cCCCCccccccccccccccCCCcchhhccccCceEEEE----------------CC---CceeccChHHHHHHHH Q lcl|Aclame:pro 1 MS---RNKTRRAARAASAHVRTANTDAPTEHHTDRAAQAEVFS----------------FG---DPVEVLDRRELLDYVE 58 (368) Q Consensus 1 m~---~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------~g---~p~~~~~~~~~~~~~~ 58 (368) |. +-|+++. ..+....+..+........... .+..|. .| .+...+...+|+.|+. T Consensus 1 Mgl~d~~r~~~~-~~~~~~~~~~~~~~~~~~~~~~--~g~~~~~~~~~~~~~~~~~~~~~g~~v~~~~al~~~~V~~ci~ 77 (431) T protein:vir:10 1 MGLFDFIRREKQ-PEAQARPHVEPSFQASTPTTSI--PGETFEGLDDPRLKEYIRRGELNGGTGRETRALRNMAVLRCVT 77 (431) T ss_pred CcchhhhhcCcc-cccccccccccccccccccccc--cccccccccchHHHHhhccCccCcceechhhhhccHHHHHHHH Confidence 54 4333221 1111111111111000000000 011111 01 1233444566666766 Q ss_pred HHhccchhcccccHHHHHHHHHhcccccchhhhccc-hHHhhccCCCCcCH-HHHHHHHHhHhhhCCeeEEEEecCCcce Q lcl|Aclame:pro 59 CMRMGQWYEPPMPWDGLARSFRAAAHHSSAVYVKRN-ILVSTFIPHPLLSR-ATFERLVLDWQVFGNAYLERRENVLGGT 136 (368) Q Consensus 59 ~~~~~~~~~~p~~~~~l~~~~r~~~~~~~~~~~~~~-~~l~~~~~n~~~~~-~~~~~~~~~~ll~Gnay~~i~r~~~G~~ 136 (368) ++. .+++..|+.++ +.. .+.....+|+ ..++...|||+++. +||+.++.+++++||+|++|.|++ |++ T Consensus 78 ~Ia-~~iA~lp~~v~------~~~--~~~~~~~~~~~~~lL~~~PN~~~t~~~f~~~l~~~lll~Gna~~~i~r~~-g~~ 147 (431) T protein:vir:10 78 LIS-GTIGMLPMNLI------SSD--DSKQVLTDDPAHRLLKYKPNDWQTPMEFKSLMQLRALLDGESMARIVWSG-NRP 147 (431) T ss_pred HHH-HhhccCceEEE------Eec--CceeeeccchHHHHHhhccCCCCCHHHHHHHHHHHHhhcCCeEEEEEEcC-Cce Confidence 554 56788887532 322 2334455666 34566789998876 688899999999999999999985 899 Q ss_pred EEEEEecccccccccCCCe---eEEEeCCceEEEEcCccEEEecCCCCcCCccccchhhHHHHHHHHHHHHHHHHHHHHh Q lcl|Aclame:pro 137 IRLDTPLAKYVRRGLDLNT---YFFVQNWQQPYTFAAGSVFHLQEPDINQEVYGLPEYLSALNATWLNESATLFRRRYYK 213 (368) Q Consensus 137 ~~L~~l~p~~v~~~~~~~~---~~~~~~~~~~~~~~~~dviH~r~~~~~~~~~G~spi~~a~~~i~~~~~a~~~~~~~f~ 213 (368) ++|+|++|.+|++..+.++ |+++..+|..+.|+++||||||+++. |+++|+||+..++++|+++.++++|..++|+ T Consensus 148 ~~L~pl~~~~v~~~~~~~~~~~y~~~~~~g~~~~~~~~dViHir~~~~-dg~~G~spi~~~~~~i~~~~~~~~~~~~~f~ 226 (431) T protein:vir:10 148 IRLIPMDRGSAKGRLTSTWQIVYDYTTPTGDKIELPAREVFHLRDLSI-DGVSGVSRVKLSGNALELAEQAERAASRTFR 226 (431) T ss_pred EEEEEEcCceeEEEEcCCCeEEEEEEeCCceEEEEchhhEEEecCcCC-CCcccccHHHHHHHHHHHHHHHHHHHHHHHh Confidence 9999999999988655443 44556678889999999999998874 7899999999999999999999999999999 Q ss_pred ccCCCceeEEeCCCCccHHHHHHHHHHHHHh-ccccccccccccccCccccccccccccchhhHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 214 NGSHAGFILYMTDAAQKQEDVDTLREAMKSA-KGPGNFRNLFMYAPNGKKDGIQLLPVSEVAAKDEFWNIKNVTRDDQLA 292 (368) Q Consensus 214 ng~~p~gil~~~~~~l~~e~~~~~k~~~~~~-~g~~n~~~~~~l~~~g~~~g~~~~pl~~~~~d~qf~e~~~~~~~~Ia~ 292 (368) ||++|+|||++++ .+++|+++++++.|++. .|.+|+|+++++ +.|++|+|++++++|+||+|++++++++||+ T Consensus 227 ng~~p~gil~~~~-~ls~e~~~~~~~~~~~~~~g~~n~g~~~vl-----~~g~~~~~l~~~~~d~q~le~r~~~~~~Ia~ 300 (431) T protein:vir:10 227 TGVMAGGAIEVPK-ELSDNAYGRMKASVQENHTGSENAGSWMLL-----EEGATAKQFSNTAASAQQIENRNHQIEEVAR 300 (431) T ss_pred ccCCccEEEecCC-CCCHHHHHHHHHHHHHHhcCccccCCceec-----CCCceEEEccCChhHHHHHHHHHHhHHHHHH Confidence 9999999999875 69999999999999876 456899999998 6789999999999999999999999999999 Q ss_pred HhCCChHHhcccccccccccCHHHHHHHHHHHHHHHHHHHHH-HHHhhcCc------ceEeechhhhhcCChhhhhhhhh Q lcl|Aclame:pro 293 AHRVPPQLMGIIPNNTGGFGDVEKAAMVFARNEVKPLQDRLL-AINDWIGD------EVVRFAPYALGGHDQPAAAPGGQ 365 (368) Q Consensus 293 ~fgVPp~~lg~~~~~~~~~sn~e~~~~~f~~~tl~P~~~~ie-~l~~~l~~------~~~~F~~~~Llr~D~~~ra~~~~ 365 (368) +|||||++||+.+ ++||+|+||+.+.|+++||.||+++|| ++|++|.+ .+|+||.++|+|+|.++|++..+ T Consensus 301 ~fgVPp~~lg~~~--~~t~sn~eq~~~~f~~~tL~P~~~~ie~~ln~~Ll~~~~~~~~~~~fd~~~llr~d~~~r~~~~~ 378 (431) T protein:vir:10 301 MYGVPRPLLMMDD--TSWGSGIEQLAIFFIQYGLSHWFVSWEQAAARAFLPEKMLGQRQFKFNEGALLRGTLNDQAAFFS 378 (431) T ss_pred HhCCCHHHhCCCC--CCccccHHHHHHHHHHHHHHHHHHHHHHHHHhhccChhhcCCceEEEechhhhccCHHHHHHHHH Confidence 9999999999864 478999999999999999999999999 59988743 26999999999999999999877 Q ss_pred hcC Q lcl|Aclame:pro 366 RSA 368 (368) Q Consensus 366 ~~~ 368 (368) ++- T Consensus 379 ~~~ 381 (431) T protein:vir:10 379 KAL 381 (431) T ss_pred HHH Confidence 653 No 20 >protein:vir:4337 Length: 434 # NCBI annotation: portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:93 # MgeName: D3 # Cross-refs: genbank:acc:NP_061500;genbank:gi:9635589;genbank:GeneID:1262858 Probab=100.00 E-value=9.9e-73 Score=415.34 Aligned_cols=350 Identities=16% Similarity=0.136 Sum_probs=279.0 Q ss_pred CCcCCCCccccccccccccccCC----C--cchh----hccc-cCceEEEECCCceeccChHHHHHHHHHHhccchhccc Q lcl|Aclame:pro 1 MSRNKTRRAARAASAHVRTANTD----A--PTEH----HTDR-AAQAEVFSFGDPVEVLDRRELLDYVECMRMGQWYEPP 69 (368) Q Consensus 1 m~~~k~~~~~~~~~~~~~~~~~~----~--~~~~----~~~~-~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~p 69 (368) ||+.=.+..++..+.+......- . ..+. ..+. +.+...+ .+...+...+|+.|+.++. .+++.+| T Consensus 1 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~v---~~~~al~~~~V~~~i~~ia-~~ia~lp 76 (434) T protein:vir:43 1 MSKSLGKVLSSATSAPRSSLFGWGGKTIRLTDGAFWSQFLGRESSSGKKV---TVDKAMKLSAVWACVRLIS-TSVAGLP 76 (434) T ss_pred CccchhhhhhhcccccchhhhcccccccccCchHHHHHHhcCCccCCcee---chhhhhccHHHHHHHHHHH-HhhhhCc Confidence 88764444443333332210000 0 0000 0000 0011111 1334466667777776554 5678888 Q ss_pred ccHHHHHHHHHhcccccchhhhccchH-HhhccCCCCcCH-HHHHHHHHhHhhhCCeeEEEEecCCcceEEEEEeccccc Q lcl|Aclame:pro 70 MPWDGLARSFRAAAHHSSAVYVKRNIL-VSTFIPHPLLSR-ATFERLVLDWQVFGNAYLERRENVLGGTIRLDTPLAKYV 147 (368) Q Consensus 70 ~~~~~l~~~~r~~~~~~~~~~~~~~~~-l~~~~~n~~~~~-~~~~~~~~~~ll~Gnay~~i~r~~~G~~~~L~~l~p~~v 147 (368) +. +++....+++....+|+.. ++...||++++. +||+.++.+++++||+|++|.++ .|+|++|+||+|.+| T Consensus 77 ~~------~~~~~~~g~~~~~~~~~l~~lL~~~PN~~~t~~~f~~~~~~~lll~Gnay~~i~~~-~G~~~~L~~l~p~~v 149 (434) T protein:vir:43 77 LG------VYERKADGSRVDARSFPLYDVVHNSPNDDMTAFQFWQAMVASMLLWGNAYAEIRRA-AGRPAALDFLLPSRV 149 (434) T ss_pred eE------EEEEcCCCccccccccHHHHHHhccCCCCCCHHHHHHHHHHHHhhcCCeEEEEEeC-CCcEEEEEEEcCcce Confidence 75 3455555555556677744 555789998764 78899999999999999999887 699999999999999 Q ss_pred ccccCCCe---eEEEeCCceEEEEcCccEEEecCCCCcCCccccchhhHHHHHHHHHHHHHHHHHHHHhccCCCceeEEe Q lcl|Aclame:pro 148 RRGLDLNT---YFFVQNWQQPYTFAAGSVFHLQEPDINQEVYGLPEYLSALNATWLNESATLFRRRYYKNGSHAGFILYM 224 (368) Q Consensus 148 ~~~~~~~~---~~~~~~~~~~~~~~~~dviH~r~~~~~~~~~G~spi~~a~~~i~~~~~a~~~~~~~f~ng~~p~gil~~ 224 (368) ++..+.++ |+++..+|..+.|+++||||+|+++ .++++|+||+..++++|+++.++++|..++|+||++|+|||++ T Consensus 150 ~~~~~~~g~~~y~~~~~~g~~~~~~~~eVih~~~~~-~dg~~G~spi~~~~~~i~~~~~~~~~~~~~f~ng~~~~gil~~ 228 (434) T protein:vir:43 150 DLECDENGRLKYFYTTKKGARREIERTNMLHIPAFT-LDGRIGLSAIRYGVDVFGSVMSAEDAANGTFKNGLLPTVAFKV 228 (434) T ss_pred EEEEcCCCeEEEEEEecCceEEEEccccEEEecCcC-CCCccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEec Confidence 98876553 4555677888999999999999885 5789999999999999999999999999999999999999998 Q ss_pred CCCCccHHHHHHHHHHHHHhccccccccccccccCccccccccccccchhhHHHHHHHHHHHHHHHHHHhCCChHHhccc Q lcl|Aclame:pro 225 TDAAQKQEDVDTLREAMKSAKGPGNFRNLFMYAPNGKKDGIQLLPVSEVAAKDEFWNIKNVTRDDQLAAHRVPPQLMGII 304 (368) Q Consensus 225 ~~~~l~~e~~~~~k~~~~~~~g~~n~~~~~~l~~~g~~~g~~~~pl~~~~~d~qf~e~~~~~~~~Ia~~fgVPp~~lg~~ 304 (368) ++ .+++|+.+++|++|+++.|+.|+|+++++ +.|++|++++++++|+||+|++++++++||++|||||++||+. T Consensus 229 ~~-~l~~e~~~~~r~~~~~~~g~~nag~~~vl-----~~g~~~~~l~~~~~d~q~~e~~~~~~~~Ia~~fgVPp~~lg~~ 302 (434) T protein:vir:43 229 DR-ILQPAQREEFREYVKSVSGAMNSGRSPVL-----EQGITPETIGINPVDAQLLETREHGVIEICRWFGVPPWMIGQT 302 (434) T ss_pred CC-CCCHHHHHHHHHHHHHhcCccccCCcccc-----CCCceEEEccCChhHHHHHHHHHHHHHHHHHHhCCCHHHhCCC Confidence 75 68999999999999999999999999998 5789999999999999999999999999999999999999998 Q ss_pred ccccccccCHHHHHHHHHHHHHHHHHHHHH-HHHhhcCc------ceEeechhhhhcCChhhhhhhhhhcC Q lcl|Aclame:pro 305 PNNTGGFGDVEKAAMVFARNEVKPLQDRLL-AINDWIGD------EVVRFAPYALGGHDQPAAAPGGQRSA 368 (368) Q Consensus 305 ~~~~~~~sn~e~~~~~f~~~tl~P~~~~ie-~l~~~l~~------~~~~F~~~~Llr~D~~~ra~~~~~~~ 368 (368) ++.+.+++|+|++.+.|+++||.||+..|| ++|++|.+ .+++||.+.|+|+|.++|++.+++.- T Consensus 303 ~~~~~~~s~~e~~~~~f~~~~L~P~~~~ie~~ln~kL~~~~~~~~~~~~fd~~~llr~d~~~r~~~~~~~~ 373 (434) T protein:vir:43 303 DKGSNWGTGLEQQMLAFLTFSISSITNQIQQCVNKRLLTAPERIRYYAEFSLEGFLKADSAGRAAWYSTMA 373 (434) T ss_pred cCCccccchHHHHHHHHHHHHHHHHHHHHHHHHHhhcCChhhhcCceEEEechhhhccCHHHHHHHHHHHH Confidence 877778999999999999999999999998 58988743 36999999999999999999877655 No 21 >protein:vir:4509 Length: 424 # NCBI annotation: portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:97 # MgeName: V # Cross-refs: genbank:acc:NP_599035;genbank:gi:19548993;genbank:GeneID:935206 Probab=100.00 E-value=7.7e-72 Score=410.45 Aligned_cols=342 Identities=11% Similarity=0.116 Sum_probs=269.5 Q ss_pred CCcCCCCccccccccccccccCCCcchhhccccCceEEEECC---CceeccChHHHHHHHHHHhccchhcccccHHHHHH Q lcl|Aclame:pro 1 MSRNKTRRAARAASAHVRTANTDAPTEHHTDRAAQAEVFSFG---DPVEVLDRRELLDYVECMRMGQWYEPPMPWDGLAR 77 (368) Q Consensus 1 m~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g---~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~ 77 (368) |-..+ -.+++... .+......+..... ..+..| .+..++...+|+.|+.++. .+++..|+.++ T Consensus 17 ~~~~~-lf~~~~~~-----~~~~~~~~~~~~~~---~~~~~~~~vs~~~al~~~~v~~cv~~Ia-~~iA~lp~~v~---- 82 (424) T protein:vir:45 17 VLLDA-LFRSKSLE-----NPSTPITGDAVDTD---GLFRADVYVSPETAMKLAAVYSCIYVLS-SSLAQMPLHVM---- 82 (424) T ss_pred HHHHh-hccccCCC-----CCccccchhhhhhh---ccccCCceechHHhhccHHHHHHHHHHH-HHHhhCceEEE---- Confidence 33221 11111000 11111111111111 111112 2445566677777776654 66888887532 Q ss_pred HHHhcccccchhhhccchH-HhhccCCCCcCH-HHHHHHHHhHhhhCCeeEEEEecCCcceEEEEEecccccccccCCCe Q lcl|Aclame:pro 78 SFRAAAHHSSAVYVKRNIL-VSTFIPHPLLSR-ATFERLVLDWQVFGNAYLERRENVLGGTIRLDTPLAKYVRRGLDLNT 155 (368) Q Consensus 78 ~~r~~~~~~~~~~~~~~~~-l~~~~~n~~~~~-~~~~~~~~~~ll~Gnay~~i~r~~~G~~~~L~~l~p~~v~~~~~~~~ 155 (368) +.. .++.....+|+.. ++...|||+++. +||+.++.+++++||+|++|.|+..|+|++|+|++|..|++...++. T Consensus 83 --~~~-~~~~~~~~~~~l~~lL~~~PN~~~t~~~f~~~~v~~lll~Gna~~~i~r~~~G~~~~L~~l~~~~v~i~~~~~~ 159 (424) T protein:vir:45 83 --RRH-KGKVEPARDHPAFYLVHDEPNTWQTSYKWRELKQRHILGWGNGYTWVKRNRRGEVISLDCCMPWETTLMNTGGR 159 (424) T ss_pred --Eec-CCceeecccchHHHHHHhhcccCCCHHHHHHHHHHHHhhcCCeEEEEEEcCCCcEEEEEEecCceEEEEEcCCe Confidence 332 3344445566644 455689998876 67888999999999999999999999999999999999999876654 Q ss_pred -eEEEeCCceEEEEcCccEEEecCCCCcCCccccchhhHHHHHHHHHHHHHHHHHHHHhccCCCceeEEeCCCCccHHHH Q lcl|Aclame:pro 156 -YFFVQNWQQPYTFAAGSVFHLQEPDINQEVYGLPEYLSALNATWLNESATLFRRRYYKNGSHAGFILYMTDAAQKQEDV 234 (368) Q Consensus 156 -~~~~~~~~~~~~~~~~dviH~r~~~~~~~~~G~spi~~a~~~i~~~~~a~~~~~~~f~ng~~p~gil~~~~~~l~~e~~ 234 (368) +|.+..++....+.++||||||.+++ ++++|+||+.+++++|+++.++++|+.++|+||++|+|||++++ .+++|++ T Consensus 160 ~~y~~~~~~~~~~~~~~eVih~r~~~~-d~~~G~spi~~~~~~i~~~~~~~~~~~~~f~ng~~p~gil~~~~-~l~~e~~ 237 (424) T protein:vir:45 160 YTYGLYNEYGAFAISPDDMIHIRALGN-NQKMGLSPIMQHAETIGMGMSGQKYTESFFSGNARPAGIVSVKS-GLNKESW 237 (424) T ss_pred EEEEEEecCceEEECcccEEEecCcCC-CCcccccHHHHHHHHHHHHHHHHHHHHHHHhccCCccEEEEeCC-CCCHHHH Confidence 45555555677899999999998875 79999999999999999999999999999999999999999886 5899999 Q ss_pred HHHHHHHHHhc-cc-cccccccccccCccccccccccccchhhHHHHHHHHHHHHHHHHHHhCCChHHhccccccccccc Q lcl|Aclame:pro 235 DTLREAMKSAK-GP-GNFRNLFMYAPNGKKDGIQLLPVSEVAAKDEFWNIKNVTRDDQLAAHRVPPQLMGIIPNNTGGFG 312 (368) Q Consensus 235 ~~~k~~~~~~~-g~-~n~~~~~~l~~~g~~~g~~~~pl~~~~~d~qf~e~~~~~~~~Ia~~fgVPp~~lg~~~~~~~~~s 312 (368) +++++.|++.+ |. .|+|+++++ +.|++|++++++++|+||+|++++++++||++|||||++||+.++ ++|+ T Consensus 238 ~~~~~~~~~~~~g~~~n~g~~~vl-----~~g~~~~~l~~~~~d~q~~e~~~~~~~~Ia~~fgVPp~~lg~~~~--~t~s 310 (424) T protein:vir:45 238 GWLKDQWQKASQALRRQENKTMLL-----PADLDYKALTVSPVDAQIIDMMKLNRSMIAGIFNIPAHMINDLEK--ATFS 310 (424) T ss_pred HHHHHHHHHHhccccccCCceeEc-----CCCceEEEccCChhHHHHHHHHHHHHHHHHHHhCCCHHHhCCCCC--CCcc Confidence 99999998765 43 689999998 678999999999999999999999999999999999999998754 6899 Q ss_pred CHHHHHHHHHHHHHHHHHHHHH-HHHhhcCc-------ceEeechhhhhcCChhhhhhhhhhcC Q lcl|Aclame:pro 313 DVEKAAMVFARNEVKPLQDRLL-AINDWIGD-------EVVRFAPYALGGHDQPAAAPGGQRSA 368 (368) Q Consensus 313 n~e~~~~~f~~~tl~P~~~~ie-~l~~~l~~-------~~~~F~~~~Llr~D~~~ra~~~~~~~ 368 (368) |+||+.+.|+++||.||++.|| ++|++|.+ .+++||.++|+|+|.++|++..++.. T Consensus 311 n~eq~~~~f~~~tL~P~~~~ie~~ln~kLl~~~e~~~g~~i~fd~~~llr~d~~~r~~~~~~~~ 374 (424) T protein:vir:45 311 NISAQAIQFVRYTMMPWVTNWEQELNRRLFTRAELAAGYYVRFNLTGLLRGTPQERAQFYHFAI 374 (424) T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhhhcCCcEEEeechhhhccCHHHHHHHHHHHH Confidence 9999999999999999999998 59988743 25999999999999999999887766 No 22 >protein:vir:8100 Length: 466 # NCBI annotation: gp4 # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:152 # MgeName: Che9c # Cross-refs: genbank:acc:NP_817681;genbank:gi:29566112;genbank:GeneID:1259306 Probab=100.00 E-value=1.7e-70 Score=403.13 Aligned_cols=350 Identities=14% Similarity=0.115 Sum_probs=263.5 Q ss_pred CCcC---CCCccc--cccccccccccCCCcchhhccccCc----------------eEEEE--CCC---ceeccChHHHH Q lcl|Aclame:pro 1 MSRN---KTRRAA--RAASAHVRTANTDAPTEHHTDRAAQ----------------AEVFS--FGD---PVEVLDRRELL 54 (368) Q Consensus 1 m~~~---k~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~----------------~~~~~--~g~---p~~~~~~~~~~ 54 (368) |+.- +++..+ +++.+...... +....+..+. ...++ .|. +...+...+++ T Consensus 1 M~~~~~l~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~v~~~~a~~~~~v~ 76 (466) T protein:vir:81 1 MRLIDRLLSTRGAAPRMSIDDYAQML----NEFAFNGIGYGFGGGVPRIQQTLAGPSTELAPDTFVGLATQAYQANGPVF 76 (466) T ss_pred CchhHHHhhccCcccccchhhhhhhh----hhhhccccccccccccHHHHHhhccccccccCccccccchhhhhccHHHH Confidence 6533 222221 11111111000 0000000000 00011 111 12234445566 Q ss_pred HHHHHHhccchhcccccHHHHHHHHHhcccccchhhhccchHHhhccCCCCcCH-HHHHHHHHhHhhhCCeeEEEEecCC Q lcl|Aclame:pro 55 DYVECMRMGQWYEPPMPWDGLARSFRAAAHHSSAVYVKRNILVSTFIPHPLLSR-ATFERLVLDWQVFGNAYLERRENVL 133 (368) Q Consensus 55 ~~~~~~~~~~~~~~p~~~~~l~~~~r~~~~~~~~~~~~~~~~l~~~~~n~~~~~-~~~~~~~~~~ll~Gnay~~i~r~~~ 133 (368) .|+..+. ..++..|+.++ +.. ..++.....|+.+.+...|||+++. +|++.++.+++++||||++|+|+.. T Consensus 77 ~~i~~Ia-~~ia~lp~~~~------~~~-~~~~~~~~~~~~~~L~~~PN~~~t~~~f~~~l~~~lll~Gnay~~i~r~~~ 148 (466) T protein:vir:81 77 ACMLVRQ-LVFSSVRFRWQ------RLR-DGKPSDTFGSRDLQILETPWKGGTTQDMLSRMIQDADLAGNSYWTIVDGEF 148 (466) T ss_pred HHHHHHH-HhhccCceEEE------Eec-CCceeeccccHHHHHhhCCCCCCCHHHHHHHHHHHHHhcCCeEEEEEecCc Confidence 6665544 56778887643 222 2344445566776677799998875 7888999999999999999999765 Q ss_pred --------cceEEEEEecccccccccCCCe----eEEEeCC-----ceEEEEcCccEEEecCC-CCcCCccccchhhHHH Q lcl|Aclame:pro 134 --------GGTIRLDTPLAKYVRRGLDLNT----YFFVQNW-----QQPYTFAAGSVFHLQEP-DINQEVYGLPEYLSAL 195 (368) Q Consensus 134 --------G~~~~L~~l~p~~v~~~~~~~~----~~~~~~~-----~~~~~~~~~dviH~r~~-~~~~~~~G~spi~~a~ 195 (368) |.+++|+|++|.+|++....++ +|.++.+ ++..+|+++||||||.+ ++.++++|+||+.+++ T Consensus 149 g~l~~~~~g~~~~l~~l~~~~v~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~dviHir~~~~~~d~~~G~s~i~~~~ 228 (466) T protein:vir:81 149 VRMRPDWVDVVVEERMVRGGRGELGGGQLGWRKVGYLYTEGGRQSGNESVGFLAEDVVHFAPIPDPLASYRGMSWLTPIL 228 (466) T ss_pred cccccccCcceeEEEEecCcceEEEEcCCCceEEEEEEEecCcccccceeeeccccEEEEcCCCCcccccccccHHHHHH Confidence 5589999999999998876653 2333332 35678999999999975 4678999999999999 Q ss_pred HHHHHHHHHHHHHHHHHhccCCCceeEEeCCCCccHHHHHHHHHHHHHh-ccccccccccccccCccccccccccccchh Q lcl|Aclame:pro 196 NATWLNESATLFRRRYYKNGSHAGFILYMTDAAQKQEDVDTLREAMKSA-KGPGNFRNLFMYAPNGKKDGIQLLPVSEVA 274 (368) Q Consensus 196 ~~i~~~~~a~~~~~~~f~ng~~p~gil~~~~~~l~~e~~~~~k~~~~~~-~g~~n~~~~~~l~~~g~~~g~~~~pl~~~~ 274 (368) ++|+++.++++|..++|+||++|+|||+++. .+++|+++++++.|++. .|.+|+|+++++ +.|++|+|+++++ T Consensus 229 ~~i~~~~a~~~~~~~~f~ng~~p~gil~~~~-~l~~e~~~~~~~~~~~~~~g~~n~g~~~vl-----~~g~~~~~l~~~~ 302 (466) T protein:vir:81 229 REIRADQAMSKHQAKFFDNGATVNLVIKHNP-MADPAAVKKWADEVNSKHAGVDNAWKNLNL-----YPGADADVVGSNL 302 (466) T ss_pred HHHHHHHHHHHHHHHHHhcCCCcceEEecCC-CCCHHHHHHHHHHHHHHhcCccccccceEc-----CCCceEEEccCCh Confidence 9999999999999999999999999999764 68999999999999875 566899999998 6789999999999 Q ss_pred hHHHHHHHHHHHHHHHHHHhCCChHHhccccc-ccccccCHHHHHHHHHHHHHHHHHHHHHH-HHhhcCc------ceEe Q lcl|Aclame:pro 275 AKDEFWNIKNVTRDDQLAAHRVPPQLMGIIPN-NTGGFGDVEKAAMVFARNEVKPLQDRLLA-INDWIGD------EVVR 346 (368) Q Consensus 275 ~d~qf~e~~~~~~~~Ia~~fgVPp~~lg~~~~-~~~~~sn~e~~~~~f~~~tl~P~~~~ie~-l~~~l~~------~~~~ 346 (368) +|+||+|++++++++||++|||||++||+.++ +++||+|+||+.+.|+++||.||+++||+ ||++|.. .+++ T Consensus 303 ~d~q~le~~~~~~~~Ia~~fgVPp~~lG~~~~~~~st~sn~eq~~~~f~~~tl~P~~~~ie~~l~~~L~~~~~~~~~~~~ 382 (466) T protein:vir:81 303 QEIDFKNVRGGGETRIAAAAGVPPVIVGLSEGLAAATYSNYGQARRRLADGTAHPLWQNLSGCIGHVMPDMGPDVRLWYD 382 (466) T ss_pred hHHHHHHHHHHHHHHHHHHhCCCHHHcccccCCCccccccHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcccCcceEEE Confidence 99999999999999999999999999998765 56899999999999999999999999995 9998854 2689 Q ss_pred echhhhhcCChhhhhhhhhhcC Q lcl|Aclame:pro 347 FAPYALGGHDQPAAAPGGQRSA 368 (368) Q Consensus 347 F~~~~Llr~D~~~ra~~~~~~~ 368 (368) ||..+|+|+|.++|++.....+ T Consensus 383 f~~~~llr~d~~~r~~~~~~~~ 404 (466) T protein:vir:81 383 ADDVPFLREDEKDAADIQKVRA 404 (466) T ss_pred ecchhhhccCHHHHHHHHHHHH Confidence 9999999999999988644332 No 23 >protein:vir:10362 Length: 432 # NCBI annotation: head portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:183 # MgeName: Xp10 # Cross-refs: genbank:acc:NP_858954;genbank:gi:32128419;genbank:GeneID:2648396 Probab=100.00 E-value=2e-70 Score=402.68 Aligned_cols=344 Identities=12% Similarity=0.101 Sum_probs=264.2 Q ss_pred CCcCCCCcccccccc---ccccccCCCcchhhccccCceEEEECCC---ceeccChHHHHHHHHHHhccchhcccccHHH Q lcl|Aclame:pro 1 MSRNKTRRAARAASA---HVRTANTDAPTEHHTDRAAQAEVFSFGD---PVEVLDRRELLDYVECMRMGQWYEPPMPWDG 74 (368) Q Consensus 1 m~~~k~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~g~---p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 74 (368) |++-|.......... ....++....... . + ...-..|. +...+...+|+.|+.++. .+++..|+.+ T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~---~-~~~s~~g~~v~~~~al~~~~V~~~i~~Ia-~~ia~lp~~~-- 81 (432) T protein:vir:10 10 LGQLKAMFVPPDPVDIGGGQTFTPVNATARD-L---G-IIISDTGAAVNADAIMRLDAVAACVKLVS-QAIAAMPLTM-- 81 (432) T ss_pred hhhhHhhcCCccccccccccccccCcchhhh-h---c-ccccccCcccchhhhhcchHHHHHHHHHH-HhhhhCceeE-- Confidence 443332221111100 0001111100000 0 0 00001222 233555666667766554 5678888753 Q ss_pred HHHHHHhcccccchhhhccchH-HhhccCCCCcCH-HHHHHHHHhHhhhCCeeEEEEecCCcceEEEEEecccccccccC Q lcl|Aclame:pro 75 LARSFRAAAHHSSAVYVKRNIL-VSTFIPHPLLSR-ATFERLVLDWQVFGNAYLERRENVLGGTIRLDTPLAKYVRRGLD 152 (368) Q Consensus 75 l~~~~r~~~~~~~~~~~~~~~~-l~~~~~n~~~~~-~~~~~~~~~~ll~Gnay~~i~r~~~G~~~~L~~l~p~~v~~~~~ 152 (368) ++.... ++....+|+.+ ++...||++++. +||+.++.+++++||||++++|+ +|++++|+|++|.+|++..+ T Consensus 82 ----y~~~~~-g~~~~~~~~l~~lL~~~PN~~~t~~~f~~~l~~~lll~Gnay~~~~~~-~g~~~~L~~l~~~~v~v~~~ 155 (432) T protein:vir:10 82 ----YMRTPD-GRKEAVNHPLYTLLLDGPNSTQTAFDFWQVVVTRLLLDGTAYVRKVVT-DGRIESLQYLANDRLTITTD 155 (432) T ss_pred ----EEecCC-CcccccccHHHHHHHhcccccCCHHHHHHHHHHHHhhcCCeEEEEEec-CCcEEEEEEEcCCceEEEEc Confidence 333333 34445567644 455789998875 78889999999999999999997 59999999999999998876 Q ss_pred CCe---eEEEeCCceEEEEcCccEEEecCCCCcCCccccchhhHHHHHHHHHHHHHHHHHHHHhccCCCceeEEeCCCCc Q lcl|Aclame:pro 153 LNT---YFFVQNWQQPYTFAAGSVFHLQEPDINQEVYGLPEYLSALNATWLNESATLFRRRYYKNGSHAGFILYMTDAAQ 229 (368) Q Consensus 153 ~~~---~~~~~~~~~~~~~~~~dviH~r~~~~~~~~~G~spi~~a~~~i~~~~~a~~~~~~~f~ng~~p~gil~~~~~~l 229 (368) .++ |+++..+|+.+.|+++||||+|.++. ++++|+||+..++++|+++.++++|..++|+||++|+|||++++ .+ T Consensus 156 ~~g~~~y~~~~~~g~~~~~~~~~iih~~~~~~-dg~~G~spi~~~~~~i~~~~~~~~~~~~~f~ng~~~~gil~~~~-~l 233 (432) T protein:vir:10 156 TKGNTAYRYRRTDGQMIDIPKQQIWKIMGYSL-DGENGLSAIRYGAQIFGTAIAAEAQAARAFRNGQLQSVYYQIDR-FL 233 (432) T ss_pred CCCcEEEEEEecCceEEEEcCccEEEecCCCC-CCcccccHHHHHHHHHHHHHHHHHHHHHHHhcCCCcceEEecCC-CC Confidence 543 44556788889999999999998764 78999999999999999999999999999999999999999875 68 Q ss_pred cHHHHHHHHHHHHHhccccccccccccccCccccccccccccchhhHHHHHHHHHHHHHHHHHHhCCChHHhccccc-cc Q lcl|Aclame:pro 230 KQEDVDTLREAMKSAKGPGNFRNLFMYAPNGKKDGIQLLPVSEVAAKDEFWNIKNVTRDDQLAAHRVPPQLMGIIPN-NT 308 (368) Q Consensus 230 ~~e~~~~~k~~~~~~~g~~n~~~~~~l~~~g~~~g~~~~pl~~~~~d~qf~e~~~~~~~~Ia~~fgVPp~~lg~~~~-~~ 308 (368) ++|+++++++.|+ |..|+|++++| +.|++|++++++++|+||+|++++++++||++|||||++||+.+. +. T Consensus 234 ~~e~~~~~~~~~~---~~~nag~~~vl-----~~g~~~~~l~~~~~d~q~le~~~~~~~~Ia~afgVPp~~lg~~~~~t~ 305 (432) T protein:vir:10 234 TDDQYDSFAKKVS---GSVEAGRAPLL-----EGGMDVKSLGLNPVDAQLLQSRQYSVESICRFFGVPPSMIGHSSAGTT 305 (432) T ss_pred CHHHHHHHHHHHh---hhhhCCCceec-----CCCceEEEccCChHHHHHHHHHHHHHHHHHHHhCCCHHHcCCccCCcc Confidence 9999999888875 45788999988 678999999999999999999999999999999999999998875 44 Q ss_pred ccccCHHHHHHHHHHHHHHHHHHHHHH-HHhhcCc------ceEeechhhhhcCChhhhhhhhhhcC Q lcl|Aclame:pro 309 GGFGDVEKAAMVFARNEVKPLQDRLLA-INDWIGD------EVVRFAPYALGGHDQPAAAPGGQRSA 368 (368) Q Consensus 309 ~~~sn~e~~~~~f~~~tl~P~~~~ie~-l~~~l~~------~~~~F~~~~Llr~D~~~ra~~~~~~~ 368 (368) ++++|+|++.+.|+++||.||++.||+ ||++|.. .+++||.++|+++|.++|++..++.- T Consensus 306 ~~~sn~e~~~~~f~~~tl~P~~~~ie~~ln~kL~~~~~~~~~~~~fd~~~ll~~d~~~r~~~~~~~~ 372 (432) T protein:vir:10 306 SWGSGIESQQLGFLSMTLSPWLRRIEQSIALNLLSPAERRRYFADFDTSALLRADSAARSSYYSQLV 372 (432) T ss_pred cccchHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCccccCceEEEeechhhhccCHHHHHHHHHHHH Confidence 677999999999999999999999994 9987743 26899999999999999999877665 No 24 >protein:vir:101648 Length: 518 # NCBI annotation: gp11 # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:1515 # MgeName: 244 # Cross-refs: genbank:acc:YP_654766;genbank:gi:109302764;genbank:GeneID:4156082 Probab=100.00 E-value=4.9e-70 Score=400.57 Aligned_cols=342 Identities=15% Similarity=0.188 Sum_probs=262.8 Q ss_pred CCcCCCCccccccccccccccCCCcchhhccccCceEEEECCCcee---------ccChHHHHHHHHHHhccchhccccc Q lcl|Aclame:pro 1 MSRNKTRRAARAASAHVRTANTDAPTEHHTDRAAQAEVFSFGDPVE---------VLDRRELLDYVECMRMGQWYEPPMP 71 (368) Q Consensus 1 m~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~p~~---------~~~~~~~~~~~~~~~~~~~~~~p~~ 71 (368) |=--..+.. ++|..+.........- ..+..+|.+.+ .+...+|++|+.++. .+++..|+. T Consensus 1 ~~~~~~~~~---------~~p~~~e~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~a~~~~~V~acV~~IA-~~iA~lpl~ 69 (518) T protein:vir:10 1 MLLANGQTL---------SAPAMAELSPQMQDSY-YYAPAVGMQLERQFSLYGGIYKNQPWVRTVIAKRA-QALARLPVK 69 (518) T ss_pred CcccCceee---------cCchhhhhhhhhhccc-ccccccceecccccchhhHHHhhhHHHHHHHHHHH-HhhccCceE Confidence 322221111 1221111110000000 00001121111 123345666666544 567777764 Q ss_pred HHHHHHHHHhcccccchhhhccchHHhhccCCCCcCH-HHHHHHHHhHhhhCCeeEEEEecCCcceEEEEEecccccccc Q lcl|Aclame:pro 72 WDGLARSFRAAAHHSSAVYVKRNILVSTFIPHPLLSR-ATFERLVLDWQVFGNAYLERRENVLGGTIRLDTPLAKYVRRG 150 (368) Q Consensus 72 ~~~l~~~~r~~~~~~~~~~~~~~~~l~~~~~n~~~~~-~~~~~~~~~~ll~Gnay~~i~r~~~G~~~~L~~l~p~~v~~~ 150 (368) +++....+. ....+|+...+...|||+++. +||+.++.+++++||+|++|.|+..|+|++|+|++|.+|++. T Consensus 70 ------l~~~~~~~~-~~~~~~~~~~Ll~~PN~~~t~~~F~~~lv~~lll~Gnay~~i~r~~~G~~~~L~~l~p~~v~v~ 142 (518) T protein:vir:10 70 ------CMFTSGDTE-TEESDTGYAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQKNKSGTPEKLMPMHPSRVAIK 142 (518) T ss_pred ------EEEEcCCCc-eeccchHHHHHHcCCCCCCCHHHHHHHHHHHHhhcCCeEEEEEECCCCcEEEEEEECCCceEEE Confidence 334444333 344566666777899998875 788999999999999999999999999999999999999987 Q ss_pred cCCC---eeEEEeC----CceEEEEcCccEEEecCCCCcCCccccchhhHHHHHHHHHHHHHHHHHHHHhccCCCceeEE Q lcl|Aclame:pro 151 LDLN---TYFFVQN----WQQPYTFAAGSVFHLQEPDINQEVYGLPEYLSALNATWLNESATLFRRRYYKNGSHAGFILY 223 (368) Q Consensus 151 ~~~~---~~~~~~~----~~~~~~~~~~dviH~r~~~~~~~~~G~spi~~a~~~i~~~~~a~~~~~~~f~ng~~p~gil~ 223 (368) .+.+ .+|.+.. ++..+.|+++||||||.+++.+.++|+||+.+++++|.++.++++|+.++|+||++|+|||+ T Consensus 143 ~~~~~~~~~y~~~~~~~~~~~~~~~~~~eViHir~~s~dg~~~G~spi~~a~~~i~~~~a~~~~~~~~f~ng~~p~gil~ 222 (518) T protein:vir:10 143 RNSRTGRYEYYFQAGAGVGTQLVSFADDEVVPIRFFNPDGLERGLSLMESLKSTIFSEDSSRNATAAMWKNAGRPNLVLR 222 (518) T ss_pred EcCCCCEEEEEEEecCCccceEEEecCCcEEEecCCCCCcccccccHHHHHHHHHHHHHHHHHHHHHHHhcCCCccEEEe Confidence 6543 2333332 33567899999999999987555689999999999999999999999999999999999999 Q ss_pred eCCCCccHHHHHHHHHHHHHhc-cccccccccccccCccccccccccccchhhHHHHHHHHHHHHHHHHHHhCCChHHhc Q lcl|Aclame:pro 224 MTDAAQKQEDVDTLREAMKSAK-GPGNFRNLFMYAPNGKKDGIQLLPVSEVAAKDEFWNIKNVTRDDQLAAHRVPPQLMG 302 (368) Q Consensus 224 ~~~~~l~~e~~~~~k~~~~~~~-g~~n~~~~~~l~~~g~~~g~~~~pl~~~~~d~qf~e~~~~~~~~Ia~~fgVPp~~lg 302 (368) +++ .+++++++++++.|++.+ |..|+|++++| +.|++|+|++++++|+||+|++++++++||++|||||++|| T Consensus 223 ~~~-~ls~e~~~~~k~~~~~~~~G~~nag~v~vL-----~~G~~~~~l~~s~~D~q~le~r~~~~~eIa~afgVPp~~lg 296 (518) T protein:vir:10 223 HEK-RLSEAAQQRLREQFDRAHSGSSNTGKTMVV-----EEGMEPIPLQLTAVEMQFIEARQLNREEVCGVYDIAPPIVH 296 (518) T ss_pred cCC-CCCHHHHHHHHHHHHHHhcCccccCcceEc-----CCCceEEEccCChhHHHHHHHHHHHHHHHHHHhCCCHHHhc Confidence 875 589999999999998865 55899999998 67899999999999999999999999999999999999999 Q ss_pred ccccccccccCHHHHHHHHHHHHHHHHHHHHH-HHHhhcCc-----ceEeechhhhhcCChhhhhhhhhhcC Q lcl|Aclame:pro 303 IIPNNTGGFGDVEKAAMVFARNEVKPLQDRLL-AINDWIGD-----EVVRFAPYALGGHDQPAAAPGGQRSA 368 (368) Q Consensus 303 ~~~~~~~~~sn~e~~~~~f~~~tl~P~~~~ie-~l~~~l~~-----~~~~F~~~~Llr~D~~~ra~~~~~~~ 368 (368) +.++ +||+|+|++.+.|+++||.||++.|| ++|++|.+ .+++||.+.|+++|.++|++..+..- T Consensus 297 ~~~~--~t~sn~eq~~~~f~~~tL~P~l~~ie~~ln~~L~~~~~~~~~~~fd~~~llr~D~~~r~~~~~~~~ 366 (518) T protein:vir:10 297 ILDR--ATFSNISAQMRAFYRDTMAIPIARIQSAMDKYVGQYWVRKNRMKFDIDDVIQPDWEAKSESTQKMV 366 (518) T ss_pred cCCC--CCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCCceEEEechhhhccCHHHHHHHHHHHH Confidence 8765 68999999999999999999999999 59988754 36899999999999999998766554 No 25 >protein:vir:5737 Length: 419 # NCBI annotation: portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:122 # MgeName: PY54 # Cross-refs: genbank:acc:NP_892048;genbank:gi:33770511;goa:Q7Y412;interpro:IPR006427;interpro:IPR006944;uniprot:Q7Y412;genbank:GeneID:1732929;interpro:IPR010994 Probab=100.00 E-value=4.3e-70 Score=400.86 Aligned_cols=347 Identities=12% Similarity=0.067 Sum_probs=271.2 Q ss_pred CCcCCCCccccccccccccccCCCcchhhccccCceEEEECCCceeccChHHHHHHHHHHhccchhcccccHHHHHHHHH Q lcl|Aclame:pro 1 MSRNKTRRAARAASAHVRTANTDAPTEHHTDRAAQAEVFSFGDPVEVLDRRELLDYVECMRMGQWYEPPMPWDGLARSFR 80 (368) Q Consensus 1 m~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~r 80 (368) |.-.|-.+++. ......+..... .........+..+ .+..++...+|..|+..+. .+++..|+. +++ T Consensus 1 m~~~~~~~~~~-~~~~~~~~~~~~--~~~~~~~~~g~~v---~~~~al~~~~v~~~i~~ia-~~ia~lp~~------~~~ 67 (419) T protein:vir:57 1 MFIPQFWKGRP-SENRVNWQVVPG--GMRSSSSQAGVII---TPETALALSAVRACVTLLA-ESVAQLPCV------LYR 67 (419) T ss_pred CcchhhhccCC-cccccccccccc--ccccccccCCcee---chHHhhccHHHHHHHHHHH-HhhccCceE------EEE Confidence 76554322221 111111111110 0011111111122 1344566667777776654 567778875 345 Q ss_pred hcccccchhhhccch-HHhhccCCCCcCH-HHHHHHHHhHhhhCCeeEEEEecCCcceEEEEEecccccccccCCCeeEE Q lcl|Aclame:pro 81 AAAHHSSAVYVKRNI-LVSTFIPHPLLSR-ATFERLVLDWQVFGNAYLERRENVLGGTIRLDTPLAKYVRRGLDLNTYFF 158 (368) Q Consensus 81 ~~~~~~~~~~~~~~~-~l~~~~~n~~~~~-~~~~~~~~~~ll~Gnay~~i~r~~~G~~~~L~~l~p~~v~~~~~~~~~~~ 158 (368) ....++..+..+|+. .++...|||+++. +||+.++.+++++||||++|+|+..|+|++|+|++|.+|++..+.+++.+ T Consensus 68 ~~~~g~~~~~~~~~l~~lL~~~PN~~~t~~~f~~~~~~~l~l~Gna~~~i~r~~~G~~~~L~pl~~~~v~v~~~~~g~~~ 147 (419) T protein:vir:57 68 RTENGGREIAFDHPLHDLIRYQPNRKDTAFEYHEQTQGVLGLEGNSYSLIDRNGRGDITELIPINPHKVIVLKGPDGMPY 147 (419) T ss_pred EcCCCceeccccchHHHHHhhccccCCCHHHHHHHHHHHHhhcCCeEEEEEECCCCcEEEEEEEcCcceEEEECCCceEE Confidence 555555566667764 3555789998775 78889999999999999999999999999999999999999887776443 Q ss_pred EeCCceEEEEcCccEEEecCCCCcCCccccchhhHHHHHHHHHHHHHHHHHHHHhccCCCceeEEeCC---CCccHHHHH Q lcl|Aclame:pro 159 VQNWQQPYTFAAGSVFHLQEPDINQEVYGLPEYLSALNATWLNESATLFRRRYYKNGSHAGFILYMTD---AAQKQEDVD 235 (368) Q Consensus 159 ~~~~~~~~~~~~~dviH~r~~~~~~~~~G~spi~~a~~~i~~~~~a~~~~~~~f~ng~~p~gil~~~~---~~l~~e~~~ 235 (368) +...+....++++||||+|.++ .++++|+||+..++.+|.++.++++|..++|+||++|+|||+++. ..+++++++ T Consensus 148 y~~~~~~~~~~~~~vih~r~~~-~d~~~G~s~i~~~~~~i~~~~~~~~~~~~~f~ng~~p~gil~~~~~~~~~~~~e~~~ 226 (419) T protein:vir:57 148 YDIPSIGEILPMRMVHHIKSFS-LDGYIGTSPIQTNPDVLGLGIAVEQHAAQVFARGTTMSGVIERPFEAKAIASQAAVD 226 (419) T ss_pred EEEcCCceEEchhhEEEecCcC-CCCcccccHHHHHHHHHHHHHHHHHHHHHHHHccCCccEEEEecCcCCcccCHHHHH Confidence 3434444678999999999886 578999999999999999999999999999999999999999853 457999999 Q ss_pred HHHHHHHHhc-cccccccccccccCccccccccccccchhhHHHHHHHHHHHHHHHHHHhCCChHHhcccccccccccCH Q lcl|Aclame:pro 236 TLREAMKSAK-GPGNFRNLFMYAPNGKKDGIQLLPVSEVAAKDEFWNIKNVTRDDQLAAHRVPPQLMGIIPNNTGGFGDV 314 (368) Q Consensus 236 ~~k~~~~~~~-g~~n~~~~~~l~~~g~~~g~~~~pl~~~~~d~qf~e~~~~~~~~Ia~~fgVPp~~lg~~~~~~~~~sn~ 314 (368) ++++.|.+.+ |..|+|+++++ +.|++|++++++++|+||+|++++++++||++|||||++||..++ ++++|+ T Consensus 227 ~~~~~~~~~~~g~~nag~~~vl-----~~g~~~~~l~~~~~d~q~~e~~~~~~~~Ia~~fgVPp~~lg~~~~--~t~sn~ 299 (419) T protein:vir:57 227 AILAKWTERYGGVRNAFSVGML-----QEGMTYKQLSQDNEKAQLLQSRQYTVNEVCRLYKVPPHMIQDLQK--STNNNI 299 (419) T ss_pred HHHHHHHHHhccccccccceec-----CCCceEEEcCCChhhHHHHHHHHHHHHHHHHHhCCCHHHhCCCCC--CccccH Confidence 9999998765 55899999998 678999999999999999999999999999999999999998654 689999 Q ss_pred HHHHHHHHHHHHHHHHHHHH-HHHhhcCc------ceEeechhhhhcCChhhhhhhhhhcC Q lcl|Aclame:pro 315 EKAAMVFARNEVKPLQDRLL-AINDWIGD------EVVRFAPYALGGHDQPAAAPGGQRSA 368 (368) Q Consensus 315 e~~~~~f~~~tl~P~~~~ie-~l~~~l~~------~~~~F~~~~Llr~D~~~ra~~~~~~~ 368 (368) |++.+.|+++||.||++.|| ++|++|.. .+++||.+.|+++|.++|++..+..- T Consensus 300 e~~~~~f~~~~l~P~~~~ie~~l~~~ll~~~~~~~~~i~fd~~~ll~~d~~~~~~~~~~~~ 360 (419) T protein:vir:57 300 EHQGLQYVIYTMLAILKRHESAMMRDLLLPSERRDFYIEFNVSSLLRGDQKSRYESYALGR 360 (419) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhccCccccCCeEEEEechhhhccCHHHHHHHHHHHH Confidence 99999999999999999998 58887643 26999999999999999999877654 No 26 >protein:vir:6240 Length: 457 # NCBI annotation: gp34 # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:131 # MgeName: phi-BT1 # Cross-refs: genbank:acc:NP_813694;swissprot:trembl:q859c3;genbank:gi:29366754;interpro:IPR006427;interpro:IPR006944;uniprot:Q859C3;genbank:GeneID:1258894 Probab=100.00 E-value=5.8e-70 Score=400.17 Aligned_cols=347 Identities=15% Similarity=0.145 Sum_probs=264.4 Q ss_pred CCcCCCCccccccc-----cccccccCCCcchhhccccCceEEEECCCc---eeccChHHHHHHHHHHhccchhcccccH Q lcl|Aclame:pro 1 MSRNKTRRAARAAS-----AHVRTANTDAPTEHHTDRAAQAEVFSFGDP---VEVLDRRELLDYVECMRMGQWYEPPMPW 72 (368) Q Consensus 1 m~~~k~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~g~p---~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 72 (368) |.....-.++..+. ......+...........+ ..|.+ ..+|...+|++|+.++. .+++..|+.+ T Consensus 1 Mg~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~g~~v~~~~al~~~~v~~~i~~ia-~~iA~lp~~~ 73 (457) T protein:vir:62 1 MGFWSALFGRGHSPALDAAEGRAWEPYDPSIYNLGATA------SSGERVTPHDALQVSAVFASVRLLS-ETIATLPLST 73 (457) T ss_pred Cchhhhhhccccccccccccccccccchhhhhhccccc------cCCceechHHhhccHHHHHHHHHHH-HhHhhCceEE Confidence 88664322111110 0000111111000000000 12333 33455667777777654 5688888764 Q ss_pred HHHHHHHHhcccccchhhhccchHHhhccCCCCcC-HHHHHHHHHhHhhhCCeeEEEEecCCcceEEEEEeccccccccc Q lcl|Aclame:pro 73 DGLARSFRAAAHHSSAVYVKRNILVSTFIPHPLLS-RATFERLVLDWQVFGNAYLERRENVLGGTIRLDTPLAKYVRRGL 151 (368) Q Consensus 73 ~~l~~~~r~~~~~~~~~~~~~~~~l~~~~~n~~~~-~~~~~~~~~~~ll~Gnay~~i~r~~~G~~~~L~~l~p~~v~~~~ 151 (368) ++... +++.....+....+...||++++ .+||+.++.+++++||||++|.++ .|++++|+|++|.+|++.. T Consensus 74 ------~~~~~-~~~~~~~~~~~~~ll~~pn~~~t~~~f~~~~~~~l~l~Gna~~~i~~~-~g~~~~l~~l~p~~v~v~~ 145 (457) T protein:vir:62 74 ------YSKRG-GTRKEIDTPEWLDFPNAEPGGMGRIDILSQTVLSLLLQGNAFLAVRWA-GPNIAGLDVLDPTKIHVHM 145 (457) T ss_pred ------EEecC-CccccccchHHHHhccccCCCCCHHHHHHHHHHHHhhcCCeEEEEEeC-CCcEEEEEEEcCcceEEEE Confidence 33332 23333333444555667777665 589999999999999999999776 5899999999999998765 Q ss_pred CCC------ee--EEEeCCce---EEEEcCccEEEecCCCCcCCccccchhhHHHHHHHHHHHHHHHHHHHHhccCCCce Q lcl|Aclame:pro 152 DLN------TY--FFVQNWQQ---PYTFAAGSVFHLQEPDINQEVYGLPEYLSALNATWLNESATLFRRRYYKNGSHAGF 220 (368) Q Consensus 152 ~~~------~~--~~~~~~~~---~~~~~~~dviH~r~~~~~~~~~G~spi~~a~~~i~~~~~a~~~~~~~f~ng~~p~g 220 (368) ... .| |.+..++. ...|+++||||||.+++.+.++|+||+.+++.+|+++.++++|+.++|+||++|+| T Consensus 146 ~~~~~~~~~~~~~y~~~~~g~~~~~~~~~~~eiih~r~~~~~~~~~G~sp~~~~~~~i~~~~~~~~~~~~~f~ng~~p~g 225 (457) T protein:vir:62 146 VMVDGLRRKVFEAYDIDADGNEVLLGWFTPRDVLHIPGMMLPGDFVGCSPISYARESIGLALAAQKYGAHFFRNGAMPGA 225 (457) T ss_pred eccCCccceeEEEEEEccCCceeEEEeeCccceEEecCCCCCCceecccHHHHHHHHHHHHHHHHHHHHHHHhccCCcce Confidence 422 12 22333333 24689999999999988777999999999999999999999999999999999999 Q ss_pred eEEeCCCCccHHHHHHHHHHHHHhc-cccccccccccccCccccccccccccchhhHHHHHHHHHHHHHHHHHHhCCChH Q lcl|Aclame:pro 221 ILYMTDAAQKQEDVDTLREAMKSAK-GPGNFRNLFMYAPNGKKDGIQLLPVSEVAAKDEFWNIKNVTRDDQLAAHRVPPQ 299 (368) Q Consensus 221 il~~~~~~l~~e~~~~~k~~~~~~~-g~~n~~~~~~l~~~g~~~g~~~~pl~~~~~d~qf~e~~~~~~~~Ia~~fgVPp~ 299 (368) ||++++ .+++|+++++++.|++.+ |..|+|++++| +.|++|+|++++++|+||+|++++++++||++|||||+ T Consensus 226 il~~~~-~ls~e~~~~~~~~~~~~~~G~~nag~~~vl-----~~g~~~~~l~~~~~d~q~~e~~~~~~~~Ia~~fgVPp~ 299 (457) T protein:vir:62 226 VVEVPG-TMSEEGLARAREAWRAANSGVDNAHRVALL-----TEGAKFSKVAMSPDEAQFLQTRQFQVPEIARIFGVPPH 299 (457) T ss_pred EEEcCC-CCCHHHHHHHHHHHHHHhcCccccCcceec-----CCCceEEEccCChhHHHHHHHHHHHHHHHHHHhCCCHH Confidence 999875 689999999999998865 56899999998 67899999999999999999999999999999999999 Q ss_pred HhcccccccccccCHHHHHHHHHHHHHHHHHHHHH-HHHhhcCcc------eEeechhhhhcCChhhhhhhhhhcC Q lcl|Aclame:pro 300 LMGIIPNNTGGFGDVEKAAMVFARNEVKPLQDRLL-AINDWIGDE------VVRFAPYALGGHDQPAAAPGGQRSA 368 (368) Q Consensus 300 ~lg~~~~~~~~~sn~e~~~~~f~~~tl~P~~~~ie-~l~~~l~~~------~~~F~~~~Llr~D~~~ra~~~~~~~ 368 (368) +||+.++++.+++|+|++.+.|+++||.||+++|| ++|++|.+. +++||.++|+|+|.++|++..++.. T Consensus 300 ~lg~~~~~~~~~sn~eq~~~~f~~~~l~P~~~~ie~~ln~~L~~~~~~~~~~i~fd~~~l~~~d~~~r~~~~~~~~ 375 (457) T protein:vir:62 300 LISDATNSTSWGSGLAEQNIAFTMFSLRPWLERIEAGFNRLLFAETADRFRFVKFNLDEIKRGAPKERMELWSLGL 375 (457) T ss_pred HcCCCCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCccccCceEEEeechhhhccCHHHHHHHHHHHH Confidence 99999887778899999999999999999999999 499887543 5899999999999999999887765 No 27 >protein:vir:105064 Length: 421 # NCBI annotation: putative portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:1465 # MgeName: phiKO2 # Cross-refs: genbank:acc:YP_006584;genbank:gi:46402090;genbank:GeneID:2777930 Probab=100.00 E-value=5.5e-70 Score=400.28 Aligned_cols=342 Identities=13% Similarity=0.104 Sum_probs=269.4 Q ss_pred CCcCCCCccccccccccccccCCCcchhhcc-----ccCceEEEECCCceeccChHHHHHHHHHHhccchhcccccHHHH Q lcl|Aclame:pro 1 MSRNKTRRAARAASAHVRTANTDAPTEHHTD-----RAAQAEVFSFGDPVEVLDRRELLDYVECMRMGQWYEPPMPWDGL 75 (368) Q Consensus 1 m~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l 75 (368) |-..+-.+.+..+ .+..+. -..... .+.++..++ +..++...+|+.|+.++. .+++.+|+. T Consensus 1 m~~~~~~~~~~~~-----~s~~~~-w~~~~~~~~~~~~~~g~~vt---~~~al~~~~v~~~i~~Ia-~~iA~lp~~---- 66 (421) T protein:vir:10 1 MFIPQMFEGKKRS-----VSGGGF-WEAMLGGVRSSHSKAGVMIT---PETALALSAVRACVTLLA-ESVAQLPVE---- 66 (421) T ss_pred CCCcchhcccccc-----cCcchh-hHHHhhhhccCcccCCceec---hHHhhccHHHHHHHHHHH-HhhccCceE---- Confidence 6533322111111 011110 000011 011111222 344566677777777665 568888875 Q ss_pred HHHHHhcccccchhhhccchH-HhhccCCCCcCH-HHHHHHHHhHhhhCCeeEEEEecCCcceEEEEEecccccccccCC Q lcl|Aclame:pro 76 ARSFRAAAHHSSAVYVKRNIL-VSTFIPHPLLSR-ATFERLVLDWQVFGNAYLERRENVLGGTIRLDTPLAKYVRRGLDL 153 (368) Q Consensus 76 ~~~~r~~~~~~~~~~~~~~~~-l~~~~~n~~~~~-~~~~~~~~~~ll~Gnay~~i~r~~~G~~~~L~~l~p~~v~~~~~~ 153 (368) +++.+..++.....+|+.. ++..+|||+++. +||+.++.+++++||||++|+|+..|+|++||||+|..|++..+. T Consensus 67 --~~~~~~~g~~~~~~~~~l~~lL~~~PN~~~t~~~f~~~~~~~lll~Gna~~~i~r~~~G~~~~L~~l~~~~v~v~~~~ 144 (421) T protein:vir:10 67 --LYRRDKNGGRQRATDHPIYDLIHSQPNKKDTSFEYFEQQQGLLGLEGNCYSIIDRDGKGYPKELIPINPKKVIVLKGP 144 (421) T ss_pred --EEEEcCCCceeecccchHHHHHhhcccCCCCHHHHHHHHHHHHhhcCCeEEEEEEcCCCcEEEEEEecCceEEEEECC Confidence 3455555666666677643 556789998875 788899999999999999999999999999999999999987766 Q ss_pred Ce--eEEEeCCceEEEEcCccEEEecCCCCcCCccccchhhHHHHHHHHHHHHHHHHHHHHhccCCCceeEEeCCC---C Q lcl|Aclame:pro 154 NT--YFFVQNWQQPYTFAAGSVFHLQEPDINQEVYGLPEYLSALNATWLNESATLFRRRYYKNGSHAGFILYMTDA---A 228 (368) Q Consensus 154 ~~--~~~~~~~~~~~~~~~~dviH~r~~~~~~~~~G~spi~~a~~~i~~~~~a~~~~~~~f~ng~~p~gil~~~~~---~ 228 (368) ++ ||++...| .+++++||||++.++ .++++|+||+..++++|+++.++++|..++|+||++|+|||+++.. . T Consensus 145 ~g~~~y~~~~~g--~~~~~~eiih~~~~~-~d~~~G~spi~~~~~~i~~~~~~~~~~~~~f~ng~~~~gil~~~~~~~~~ 221 (421) T protein:vir:10 145 DGMPYYEIPEIG--ETLPMRMMHHVKVFS-LDGYIGSSPIQTNADVLGLNLAVEEHASAVFRRGATMSGVIERPKEAPAI 221 (421) T ss_pred CceEEEEEcCCC--cEEchhhEEEecCcC-CCCcccccHHHHHHHHHHHHHHHHHHHHHHHhcCCCccEEEEecCccCcc Confidence 55 45554444 468899999999887 4799999999999999999999999999999999999999998642 3 Q ss_pred ccHHHHHHHHHHHHHhc-cccccccccccccCccccccccccccchhhHHHHHHHHHHHHHHHHHHhCCChHHhcccccc Q lcl|Aclame:pro 229 QKQEDVDTLREAMKSAK-GPGNFRNLFMYAPNGKKDGIQLLPVSEVAAKDEFWNIKNVTRDDQLAAHRVPPQLMGIIPNN 307 (368) Q Consensus 229 l~~e~~~~~k~~~~~~~-g~~n~~~~~~l~~~g~~~g~~~~pl~~~~~d~qf~e~~~~~~~~Ia~~fgVPp~~lg~~~~~ 307 (368) +++|+++++++.|++.+ |.+|+++++++ +.|++|++++++++|+||+|.+++++++||++|||||++||+.++ T Consensus 222 ~~~e~~~~~~~~~~~~~~g~~n~~~~~vl-----~~g~~~~~l~~~~~d~q~~e~~~~~~~~Ia~~fgVPp~~lg~~~~- 295 (421) T protein:vir:10 222 KSQEKIDQLLAKWTDRYSGINNMFSVALL-----QEGMSYKQMSQDNEKAQLLQSRQWGVEEVCRLYKIPPHMVQMLAK- 295 (421) T ss_pred CCHHHHHHHHHHHHHHhcCccccCcceec-----CCCceEEecCCChhHHHHHHHHHHhHHHHHHHhCCCHHHcCCCcC- Confidence 59999999999998865 56899999998 678999999999999999999999999999999999999998764 Q ss_pred cccccCHHHHHHHHHHHHHHHHHHHHH-HHHhhcCcc------eEeechhhhhcCChhhhhhhhhhcC Q lcl|Aclame:pro 308 TGGFGDVEKAAMVFARNEVKPLQDRLL-AINDWIGDE------VVRFAPYALGGHDQPAAAPGGQRSA 368 (368) Q Consensus 308 ~~~~sn~e~~~~~f~~~tl~P~~~~ie-~l~~~l~~~------~~~F~~~~Llr~D~~~ra~~~~~~~ 368 (368) +||+|+|++.+.|+++||.||++.|| ++|++|... +++||.+.|+++|.++|++..++.- T Consensus 296 -~t~sn~e~~~~~f~~~tl~P~~~~ie~~ln~kL~~~~~~~~~~v~fd~~~l~~~d~~~~~~~~~~~~ 362 (421) T protein:vir:10 296 -ATNNNIEHQGLQFVMYTLLAWLKRHEGALQRDLLLPSERRDLYIEFNVSGLLRGDQKSRYESYALGR 362 (421) T ss_pred -CccccHHHHHHHHHHHHHHHHHHHHHHHHhhhccCccccCCeEEEEechhhhccCHHHHHHHHHHHH Confidence 68999999999999999999999998 599887432 6899999999999999999877764 No 28 >protein:vir:1326 Length: 457 # NCBI annotation: gp34 # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:28 # MgeName: phi-C31 # Cross-refs: genbank:acc:NP_047925;swissprot:trembl:q9zxb2;genbank:gi:9631143;uniprot:Q9ZXB2;genbank:GeneID:2715872 Probab=100.00 E-value=1e-69 Score=398.80 Aligned_cols=347 Identities=16% Similarity=0.166 Sum_probs=263.2 Q ss_pred CCcCCCCcccccc-----ccccccccCCCcchhhccccCceEEEECCCce---eccChHHHHHHHHHHhccchhcccccH Q lcl|Aclame:pro 1 MSRNKTRRAARAA-----SAHVRTANTDAPTEHHTDRAAQAEVFSFGDPV---EVLDRRELLDYVECMRMGQWYEPPMPW 72 (368) Q Consensus 1 m~~~k~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~p~---~~~~~~~~~~~~~~~~~~~~~~~p~~~ 72 (368) |...+.-.++-.. .......+.+.......... ..|.++ ..+...+|++|+.++. .+++..|+.+ T Consensus 1 Mg~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~g~~V~~~~al~~~~V~~~v~~Ia-~~iA~lp~~~ 73 (457) T protein:vir:13 1 MGFWSALFGRGHSPALDGIEARAWEPYDPSIYNLGAVA------ASGETVTPHDALQVSAVFASVRLLS-ETIATLPLST 73 (457) T ss_pred CchhhhhhcccccccccccccccccccchHHHhhcccc------cCCceechHHhhccHHHHHHHHHHH-HhhccCceEE Confidence 8765432221111 11111111111110111111 123333 3455566777776654 5688888763 Q ss_pred HHHHHHHHhcccccchhhhccchHH-hhccCCCCcCHHHHHHHHHhHhhhCCeeEEEEecCCcceEEEEEeccccccccc Q lcl|Aclame:pro 73 DGLARSFRAAAHHSSAVYVKRNILV-STFIPHPLLSRATFERLVLDWQVFGNAYLERRENVLGGTIRLDTPLAKYVRRGL 151 (368) Q Consensus 73 ~~l~~~~r~~~~~~~~~~~~~~~~l-~~~~~n~~~~~~~~~~~~~~~ll~Gnay~~i~r~~~G~~~~L~~l~p~~v~~~~ 151 (368) ++....+ ......|+... +...||.++..+||+.++.+++++||||++|.++ .|+|++|+|++|.+|++.. T Consensus 74 ------~~~~~~~-~~~~~~~~l~~~ln~~~n~~t~~~f~~~~~~~lll~Gna~~~i~~~-~g~~~~l~~l~p~~v~v~~ 145 (457) T protein:vir:13 74 ------YSKRGGS-RKEIVTPEWLDYPNAEPGGMGRIDILSQTVLSLLLQGNAFLAVRWQ-GPNIVGLDVLDPTKIHVHM 145 (457) T ss_pred ------EEecCCc-ccccccchHHHhccccCCCCCHHHHHHHHHHHHhhcCCeEEEEEec-CCcEEEEEEEccCceEEEE Confidence 3333322 22233444333 3334455566789999999999999999999887 4999999999999998865 Q ss_pred CCC------ee--EEEeCCce---EEEEcCccEEEecCCCCcCCccccchhhHHHHHHHHHHHHHHHHHHHHhccCCCce Q lcl|Aclame:pro 152 DLN------TY--FFVQNWQQ---PYTFAAGSVFHLQEPDINQEVYGLPEYLSALNATWLNESATLFRRRYYKNGSHAGF 220 (368) Q Consensus 152 ~~~------~~--~~~~~~~~---~~~~~~~dviH~r~~~~~~~~~G~spi~~a~~~i~~~~~a~~~~~~~f~ng~~p~g 220 (368) ... .| |.+..++. ...|+++||||++.+++.++++|+||+.+++.+|+++.++++|..++|+||++|+| T Consensus 146 ~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~diih~~~~~~~~~~~G~s~i~~~~~~i~~~~~~~~~~~~~f~ng~~p~g 225 (457) T protein:vir:13 146 VMVDGLRRKVFEAYDIDADGNEVLLGWFTPRDVLHIPGMMLPGDFVGCSPISYARESIGLALAAQKYGSKFFANGAMPGA 225 (457) T ss_pred ecCCCccceeEEEEEEecCCceeeEEeeCccceEEecCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHHhcCCCcce Confidence 432 12 33333333 24688999999999988777999999999999999999999999999999999999 Q ss_pred eEEeCCCCccHHHHHHHHHHHHHhc-cccccccccccccCccccccccccccchhhHHHHHHHHHHHHHHHHHHhCCChH Q lcl|Aclame:pro 221 ILYMTDAAQKQEDVDTLREAMKSAK-GPGNFRNLFMYAPNGKKDGIQLLPVSEVAAKDEFWNIKNVTRDDQLAAHRVPPQ 299 (368) Q Consensus 221 il~~~~~~l~~e~~~~~k~~~~~~~-g~~n~~~~~~l~~~g~~~g~~~~pl~~~~~d~qf~e~~~~~~~~Ia~~fgVPp~ 299 (368) ||++++ .+++|+++++++.|++.+ |.+|+|++++| +.|++|++++++++|+||+|++++++++||++|||||+ T Consensus 226 il~~~~-~ls~e~~~~~~~~~~~~~~g~~nag~~~vl-----~~g~~~~~l~~~~~d~q~~e~~~~~~~~Ia~~fgVPp~ 299 (457) T protein:vir:13 226 VVEVPG-TMSEEGLARAREAWRAANSGVDNAHRVALL-----TEGAKFSKVAMSPDEAQFLQTRQFQVPEIARIFGVPPH 299 (457) T ss_pred EEEcCC-CCCHHHHHHHHHHHHHHhcCccccCcceec-----CCCceEEEccCChhHHHHHHHHHHHHHHHHHHhCCCHH Confidence 999875 689999999999998865 56899999998 67899999999999999999999999999999999999 Q ss_pred HhcccccccccccCHHHHHHHHHHHHHHHHHHHHHH-HHhhcCcc------eEeechhhhhcCChhhhhhhhhhcC Q lcl|Aclame:pro 300 LMGIIPNNTGGFGDVEKAAMVFARNEVKPLQDRLLA-INDWIGDE------VVRFAPYALGGHDQPAAAPGGQRSA 368 (368) Q Consensus 300 ~lg~~~~~~~~~sn~e~~~~~f~~~tl~P~~~~ie~-l~~~l~~~------~~~F~~~~Llr~D~~~ra~~~~~~~ 368 (368) +||+.++++.+++|+|++.+.|+++||.||+++||+ +|++|.+. +++||.++|+++|.++|++..++.. T Consensus 300 ~lg~~~~~~~~~sn~eq~~~~f~~~tl~P~~~~ie~~ln~~L~~~~~~~~~~i~fd~~~l~~~D~~~r~~~~~~~~ 375 (457) T protein:vir:13 300 LISDATNSTSWGSGLAEQNIAFTMFSLRPWLERIEAGFNRLLFAETADRFRFVKFNLDEIKRGAPKERMELWSLGL 375 (457) T ss_pred HcCCCCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCccccCceeEEeechhhhccCHHHHHHHHHHHH Confidence 999998877788999999999999999999999995 99887543 5899999999999999999887764 No 29 >protein:vir:7853 Length: 518 # NCBI annotation: gp10 # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:150 # MgeName: CJW1 # Cross-refs: genbank:acc:NP_817460;genbank:gi:29565889;genbank:GeneID:1259085 Probab=100.00 E-value=1.6e-69 Score=397.72 Aligned_cols=342 Identities=15% Similarity=0.187 Sum_probs=261.6 Q ss_pred CCcCCCCccccccccccccccCCCcchhhccccCceEEEECCCcee---------ccChHHHHHHHHHHhccchhccccc Q lcl|Aclame:pro 1 MSRNKTRRAARAASAHVRTANTDAPTEHHTDRAAQAEVFSFGDPVE---------VLDRRELLDYVECMRMGQWYEPPMP 71 (368) Q Consensus 1 m~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~p~~---------~~~~~~~~~~~~~~~~~~~~~~p~~ 71 (368) |=-...+... +|..+.........- ..+..+|.+.. .+...+|+.|+.++. .+++..|+. T Consensus 1 ~~~~~~~~~~---------~p~~~~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~V~acV~~IA-~~iA~lp~~ 69 (518) T protein:vir:78 1 MLLANGQTLS---------APAMAELSPQMQDSY-YYAPAVGMQLERQFSLYGGIYKNQPWVRTVIAKRA-QALARLPVK 69 (518) T ss_pred CcccCceeec---------cchhhhhhhhhhhcc-cccceeceecccccchhhHHhhhhHHHHHHHHHHH-HhhccCceE Confidence 3222221111 222111111000000 00011122211 123345566665544 567777765 Q ss_pred HHHHHHHHHhcccccchhhhccchHHhhccCCCCcCH-HHHHHHHHhHhhhCCeeEEEEecCCcceEEEEEecccccccc Q lcl|Aclame:pro 72 WDGLARSFRAAAHHSSAVYVKRNILVSTFIPHPLLSR-ATFERLVLDWQVFGNAYLERRENVLGGTIRLDTPLAKYVRRG 150 (368) Q Consensus 72 ~~~l~~~~r~~~~~~~~~~~~~~~~l~~~~~n~~~~~-~~~~~~~~~~ll~Gnay~~i~r~~~G~~~~L~~l~p~~v~~~ 150 (368) + ++.+... .....++...++...|||+++. +||+.++.+++++||+|++|.|+..|+|++|+|++|.+|++. T Consensus 70 l------~~~~~~~-~~~~~~~~~~~Ll~~PN~~~t~~~F~~~lv~~lll~Gnay~~i~r~~~G~~~~L~~l~p~~Vtv~ 142 (518) T protein:vir:78 70 C------MFTSGDT-ETEEHDTGYAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQKNKSGTPEKLMPMHPSRVAIK 142 (518) T ss_pred E------EEEcCCc-cccccchHHHHHHhCCCCCCCHHHHHHHHHHHHhhcCCeEEEEEEcCCCcEEEEEEECCCceEEE Confidence 3 3444333 3333455666677799998875 788999999999999999999999999999999999999987 Q ss_pred cCCC---eeEEEeC----CceEEEEcCccEEEecCCCCcCCccccchhhHHHHHHHHHHHHHHHHHHHHhccCCCceeEE Q lcl|Aclame:pro 151 LDLN---TYFFVQN----WQQPYTFAAGSVFHLQEPDINQEVYGLPEYLSALNATWLNESATLFRRRYYKNGSHAGFILY 223 (368) Q Consensus 151 ~~~~---~~~~~~~----~~~~~~~~~~dviH~r~~~~~~~~~G~spi~~a~~~i~~~~~a~~~~~~~f~ng~~p~gil~ 223 (368) .+.+ .+|++.. ++..+.|+++||||||.+++.+.++|+||+.+++++|..+.++++|+.++|+||++|+|||+ T Consensus 143 ~~~~~~~~~y~~~~~~~~~~~~~~~~~~eIiHir~~~~dg~~~G~Spi~~~~~~i~~~~aa~~~~~~~f~Ng~~p~gvl~ 222 (518) T protein:vir:78 143 RNSRTGRYEYYFQAGAGVGTQLVSFADDEVVPIRFFNPDGLERGLSLMESLKSTIFSEDSSRNATAAMWKNAGRPNLVLR 222 (518) T ss_pred EcCCCCEEEEEEEecCCccceeEEecCCcEEEecCCCCCcccccccHHHHHHHHHHHHHHHHHHHHHHHhcCCCccEEEe Confidence 6543 2333332 34567899999999999987555689999999999999999999999999999999999999 Q ss_pred eCCCCccHHHHHHHHHHHHHhc-cccccccccccccCccccccccccccchhhHHHHHHHHHHHHHHHHHHhCCChHHhc Q lcl|Aclame:pro 224 MTDAAQKQEDVDTLREAMKSAK-GPGNFRNLFMYAPNGKKDGIQLLPVSEVAAKDEFWNIKNVTRDDQLAAHRVPPQLMG 302 (368) Q Consensus 224 ~~~~~l~~e~~~~~k~~~~~~~-g~~n~~~~~~l~~~g~~~g~~~~pl~~~~~d~qf~e~~~~~~~~Ia~~fgVPp~~lg 302 (368) +++ .+++++++++++.|++.+ |..|+|++++| +.|++|++++++++|+||+|++++++++||++|||||++|| T Consensus 223 ~~~-~ls~e~~~~~k~~~~~~~~G~~nag~~~vL-----~~G~~~~~l~~~~~d~q~le~r~~~~~eIa~afgVPp~~lg 296 (518) T protein:vir:78 223 HEK-RLSPEAQQRLREQFDRAHAGSSNTGKTMVV-----EEGMEPIPLQLTAVEMQFIEARQLNREEVCGVYDIAPPIVH 296 (518) T ss_pred cCC-CCCHHHHHHHHHHHHHHhcCcccCCceeEc-----CCCceEEeccCChhHHHHHHHHHHHHHHHHHHhCCCHHHhc Confidence 875 689999999999998765 55899999998 67899999999999999999999999999999999999999 Q ss_pred ccccccccccCHHHHHHHHHHHHHHHHHHHHH-HHHhhcCc-----ceEeechhhhhcCChhhhhhhhhhcC Q lcl|Aclame:pro 303 IIPNNTGGFGDVEKAAMVFARNEVKPLQDRLL-AINDWIGD-----EVVRFAPYALGGHDQPAAAPGGQRSA 368 (368) Q Consensus 303 ~~~~~~~~~sn~e~~~~~f~~~tl~P~~~~ie-~l~~~l~~-----~~~~F~~~~Llr~D~~~ra~~~~~~~ 368 (368) +.++ +||+|+|++.+.|+++||.||+++|| ++|++|.+ .+++||.+.|+++|.++|++..+..- T Consensus 297 ~~~~--st~sn~e~~~~~f~~~tL~P~~~~ie~eln~~L~~~~~~~~~~~fd~~~Llr~D~~~r~~~~~~~~ 366 (518) T protein:vir:78 297 ILDR--ATFSNISAQMRAFYRDTMAIPIARIQSAMDKYVGQYWVRKNRMKFDIDDVIQPDWEAKSESTQKMV 366 (518) T ss_pred cCCC--CCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcceEEeechhhhccCHHHHHHHHHHHH Confidence 8765 68999999999999999999999999 49988754 36899999999999999998776654 No 30 >protein:vir:102080 Length: 429 # NCBI annotation: portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:1503 # MgeName: Fah # Cross-refs: genbank:acc:YP_512313;genbank:gi:89152482;genbank:GeneID:3953073 Probab=100.00 E-value=1.7e-69 Score=397.66 Aligned_cols=349 Identities=14% Similarity=0.134 Sum_probs=275.3 Q ss_pred CCcCCCCcc--ccccccccccccCCCcchhhccccCceEEEECCCceeccChHHHHHHHHHHhccchhcccccHHHHHHH Q lcl|Aclame:pro 1 MSRNKTRRA--ARAASAHVRTANTDAPTEHHTDRAAQAEVFSFGDPVEVLDRRELLDYVECMRMGQWYEPPMPWDGLARS 78 (368) Q Consensus 1 m~~~k~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~ 78 (368) |+.-++... +|.+.+....+.......+......+...+ .+...+...+++.|+.++. .+++..|+.+ T Consensus 1 M~~~~~~f~~~~r~~~~~~~~~~~~~~~~~~~g~~~~~~~v---~~~~al~~~~v~~~i~~ia-~~ia~l~~~~------ 70 (429) T protein:vir:10 1 MDSVKKFFNFEKRQTSQVIELNKDDEKLLEWLGISPSTISV---KGKNALKVATVFACIKILS-ESVSKLPLKI------ 70 (429) T ss_pred CchhhhhhcccccCcccccccCCChHHHHHHhcCCCCccee---chhhhhccHHHHHHHHHHH-HhhccCceEE------ Confidence 776654322 122211111111111112222211111111 1334566777778887664 5677777653 Q ss_pred HHhcccccchhhhccchH-HhhccCCCCcCH-HHHHHHHHhHhhhCCeeEEEEecCCcceEEEEEecccccccccCCC-- Q lcl|Aclame:pro 79 FRAAAHHSSAVYVKRNIL-VSTFIPHPLLSR-ATFERLVLDWQVFGNAYLERRENVLGGTIRLDTPLAKYVRRGLDLN-- 154 (368) Q Consensus 79 ~r~~~~~~~~~~~~~~~~-l~~~~~n~~~~~-~~~~~~~~~~ll~Gnay~~i~r~~~G~~~~L~~l~p~~v~~~~~~~-- 154 (368) ++... .+.....+|+.. ++...|||+++. +||+.++.+++++||+|++|.|+..|+|++|+|++|++|++..+.. T Consensus 71 ~~~~~-~~~~~~~~~~l~~lL~~~PN~~~t~~~f~~~~~~~lll~Gnay~~i~r~~~G~~~~L~~i~~~~v~v~~~~~~~ 149 (429) T protein:vir:10 71 YQEDE-YGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVYIDDVGL 149 (429) T ss_pred EEecC-CceeeccccHHHHHHHhhccCCCCHHHHHHHHHHHHhhcCCeEEEEEECCCCcEEEEEEEcCceeEEEEcCccc Confidence 33332 234445566643 455689998875 7889999999999999999999999999999999999999876543 Q ss_pred ------eeEEEeCCceEEEEcCccEEEecCCCCcCCccccchhhHHHHHHHHHHHHHHHHHHHHhccCCCceeEEeCCCC Q lcl|Aclame:pro 155 ------TYFFVQNWQQPYTFAAGSVFHLQEPDINQEVYGLPEYLSALNATWLNESATLFRRRYYKNGSHAGFILYMTDAA 228 (368) Q Consensus 155 ------~~~~~~~~~~~~~~~~~dviH~r~~~~~~~~~G~spi~~a~~~i~~~~~a~~~~~~~f~ng~~p~gil~~~~~~ 228 (368) .||.+..+|..+.|+++||||||.+.+.++++|+||+..++.+|+++.+++++..++|+||++|+|||++++ . T Consensus 150 ~~~~~~~~~~~~~~g~~~~~~~~evih~~~~~~~~~~~G~s~i~~~~~~i~~~~~~~~~~~~~~~ng~~~~~il~~~~-~ 228 (429) T protein:vir:10 150 LNSKTKMWYVVNTGGQQRVLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVG-D 228 (429) T ss_pred ccccceEEEEEccCCeEEEEccccEEEecCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhccCCccEEEEcCC-C Confidence 256777788889999999999998777899999999999999999999999999999999999999999875 6 Q ss_pred ccHHHHHHHHHHHHHhc-cccccccccccccCccccccccccccchhhHHHHHHHHHHHHHHHHHHhCCChHHhcccccc Q lcl|Aclame:pro 229 QKQEDVDTLREAMKSAK-GPGNFRNLFMYAPNGKKDGIQLLPVSEVAAKDEFWNIKNVTRDDQLAAHRVPPQLMGIIPNN 307 (368) Q Consensus 229 l~~e~~~~~k~~~~~~~-g~~n~~~~~~l~~~g~~~g~~~~pl~~~~~d~qf~e~~~~~~~~Ia~~fgVPp~~lg~~~~~ 307 (368) +++|+.+++++.|++.+ |..|+++++++ +.|++|+|++++++|+||+|++++++++||++|||||++||..++ T Consensus 229 l~~e~~~~~~~~~~~~~~g~~n~~~~~vl-----~~g~~~~~l~~~~~d~q~~e~~~~~~~~Ia~~fgVP~~~lg~~~~- 302 (429) T protein:vir:10 229 LNEDAKKVFRENFESMSSGLQNSHRIALM-----PVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSK- 302 (429) T ss_pred CCHHHHHHHHHHHHHHhccccccCceeec-----CCCceEEEccCChhHHHHHHHHHHHHHHHHHHhCCCHHHhCCCCC- Confidence 89999999999998865 55899999998 678999999999999999999999999999999999999998654 Q ss_pred cccccCHHHHHHHHHHHHHHHHHHHHH-HHHhhcCc-------ceEeechhhhhcCChhhhhhhhhhcC Q lcl|Aclame:pro 308 TGGFGDVEKAAMVFARNEVKPLQDRLL-AINDWIGD-------EVVRFAPYALGGHDQPAAAPGGQRSA 368 (368) Q Consensus 308 ~~~~sn~e~~~~~f~~~tl~P~~~~ie-~l~~~l~~-------~~~~F~~~~Llr~D~~~ra~~~~~~~ 368 (368) ++|+|+|++.+.|++++|.||++.|| ++|++|.+ .+++||.+.|+++|.+++++..++.- T Consensus 303 -~~~sn~e~~~~~f~~~~l~P~~~~ie~~ln~kl~~~~~~~~g~~~~fd~~~ll~~d~~~~~~~~~~~~ 370 (429) T protein:vir:10 303 -ATLNNIEQQQQQFYTDTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAILRADIKTRYEAYRTGI 370 (429) T ss_pred -CCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhhcChhhcCCCcEEEeechhhhcCCHHHHHHHHHHHH Confidence 68999999999999999999999998 58987743 26899999999999999999887765 No 31 >protein:vir:97060 Length: 432 # NCBI annotation: putative head portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:1653 # MgeName: OP1 # Cross-refs: genbank:acc:YP_453563;genbank:gi:84662598;genbank:GeneID:5142475 Probab=100.00 E-value=1.3e-69 Score=398.16 Aligned_cols=344 Identities=12% Similarity=0.097 Sum_probs=263.4 Q ss_pred CCcCCCCcccccccc---ccccccCCCcchhhccccCceEEEECCC---ceeccChHHHHHHHHHHhccchhcccccHHH Q lcl|Aclame:pro 1 MSRNKTRRAARAASA---HVRTANTDAPTEHHTDRAAQAEVFSFGD---PVEVLDRRELLDYVECMRMGQWYEPPMPWDG 74 (368) Q Consensus 1 m~~~k~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~g~---p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 74 (368) |++-|.......... ....++........ + ...-..|. ++.++...+|+.|+.++. ++++..|+.+ T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~-~~~~~~g~~v~~~~a~~~~aV~~~v~~Ia-~~ia~lp~~~-- 81 (432) T protein:vir:97 10 LGQLKAMFVPPDPVDIGGGQTFTPVNATARDL----G-IIISDTGAAVNADAIMRLDAVAACVKLVS-QAVAAMPLMM-- 81 (432) T ss_pred hhhhHhhcCCccccccccccccccCchhhhhh----c-ccccccCcccchHhhhcchHHHHHHHHHH-HhhccCceEE-- Confidence 454443222211100 00011111000000 0 00001232 233555666666766554 5688888753 Q ss_pred HHHHHHhcccccchhhhccchH-HhhccCCCCcCH-HHHHHHHHhHhhhCCeeEEEEecCCcceEEEEEecccccccccC Q lcl|Aclame:pro 75 LARSFRAAAHHSSAVYVKRNIL-VSTFIPHPLLSR-ATFERLVLDWQVFGNAYLERRENVLGGTIRLDTPLAKYVRRGLD 152 (368) Q Consensus 75 l~~~~r~~~~~~~~~~~~~~~~-l~~~~~n~~~~~-~~~~~~~~~~ll~Gnay~~i~r~~~G~~~~L~~l~p~~v~~~~~ 152 (368) ++...+ +.....+|+.+ ++...||++++. +||+.++.+++++||||++++|+ +|++.+|+|++|.+|++..+ T Consensus 82 ----y~~~~~-g~~~~~~~pl~~lL~~~PN~~~t~~~f~~~l~~~lll~Gnay~~~~~~-~g~~~~L~~l~p~~v~v~~~ 155 (432) T protein:vir:97 82 ----YMRTPD-GRKEAVNHPLYTLLLDGPNSTQTAFDFWQVVVTRLLLDGTAYVRKVVT-DGRIESLQYLANDRLTITTD 155 (432) T ss_pred ----EEecCC-CcccccccHHHHHHHhcccccCCHHHHHHHHHHHHhhcCCeEEEEEec-CCcEEEEEEEcCcceEEEEc Confidence 343333 34445567644 555789998875 78889999999999999999997 59999999999999998765 Q ss_pred CCe---eEEEeCCceEEEEcCccEEEecCCCCcCCccccchhhHHHHHHHHHHHHHHHHHHHHhccCCCceeEEeCCCCc Q lcl|Aclame:pro 153 LNT---YFFVQNWQQPYTFAAGSVFHLQEPDINQEVYGLPEYLSALNATWLNESATLFRRRYYKNGSHAGFILYMTDAAQ 229 (368) Q Consensus 153 ~~~---~~~~~~~~~~~~~~~~dviH~r~~~~~~~~~G~spi~~a~~~i~~~~~a~~~~~~~f~ng~~p~gil~~~~~~l 229 (368) .++ |++...+|+.+.++++||||+|.++. ++++|+||+..++++|+++.++++|..++|+||++|+|||++++ .+ T Consensus 156 ~~g~~~y~~~~~~g~~~~~~~~~iih~r~~~~-dg~~G~spi~~~~~~i~~~~a~~~~~~~~f~ng~~~~gil~~~~-~l 233 (432) T protein:vir:97 156 TKGNTAYRYRRTDGQMIDIPRQQIWKIMGYSL-DGENGLSAIRYGAQIFGTAIAAEAQAARAFRNGQLQSVYYQIDR-FL 233 (432) T ss_pred CCCcEEEEEEecCceEEEEccccEEEecCcCC-CCcccccHHHHHHHHHHHHHHHHHHHHHHHhccCCcceeEecCC-CC Confidence 543 44445678888999999999998764 78999999999999999999999999999999999999999875 68 Q ss_pred cHHHHHHHHHHHHHhccccccccccccccCccccccccccccchhhHHHHHHHHHHHHHHHHHHhCCChHHhccccc-cc Q lcl|Aclame:pro 230 KQEDVDTLREAMKSAKGPGNFRNLFMYAPNGKKDGIQLLPVSEVAAKDEFWNIKNVTRDDQLAAHRVPPQLMGIIPN-NT 308 (368) Q Consensus 230 ~~e~~~~~k~~~~~~~g~~n~~~~~~l~~~g~~~g~~~~pl~~~~~d~qf~e~~~~~~~~Ia~~fgVPp~~lg~~~~-~~ 308 (368) ++|+++++++.|. |..|+|++++| +.|++|++++++++|+||+|++++++++||++|||||++||+.+. +. T Consensus 234 ~~e~~~~~~~~~~---~~~nag~~~vl-----~~g~~~~~l~~~~~d~q~~e~~~~~~~~Ia~~fgVPp~~lg~~~~~t~ 305 (432) T protein:vir:97 234 TDDQYDSFSKKVS---GSVEAGRAPLL-----EGGMDVKSLGLNPVDAQLLQSRQYSVESICRFFGVPPSMIGHSSAGTT 305 (432) T ss_pred CHHHHHHHHHHHh---hhhcCCCceec-----CCCceEEEccCChhHHHHHHHHHHHHHHHHHHhCCCHHHcCCcCCccc Confidence 9999988887775 45788999998 678999999999999999999999999999999999999998765 34 Q ss_pred ccccCHHHHHHHHHHHHHHHHHHHHHH-HHhhcCc------ceEeechhhhhcCChhhhhhhhhhcC Q lcl|Aclame:pro 309 GGFGDVEKAAMVFARNEVKPLQDRLLA-INDWIGD------EVVRFAPYALGGHDQPAAAPGGQRSA 368 (368) Q Consensus 309 ~~~sn~e~~~~~f~~~tl~P~~~~ie~-l~~~l~~------~~~~F~~~~Llr~D~~~ra~~~~~~~ 368 (368) ++++|+|++.+.|+++||.||++.||+ ||++|.. .+++||.+.|+++|.++|++..++.- T Consensus 306 ~~~s~~e~~~~~f~~~tl~P~~~~ie~~ln~kLl~~~e~~~~~~~fd~~~llr~d~~~r~~~~~~~~ 372 (432) T protein:vir:97 306 SWGSGIESQQLGFLTMTLSPWLRRIEQSIALNLLTPAERRRYFADFDTSALLRADSAARSSYYSQLV 372 (432) T ss_pred ccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCccccCceEEEeechhhhccCHHHHHHHHHHHH Confidence 567899999999999999999999995 9987743 26999999999999999999877655 No 32 >protein:vir:81072 Length: 432 # NCBI annotation: p07 # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:1889 # MgeName: Xop411 # Cross-refs: genbank:acc:YP_001285677;genbank:gi:148727185;genbank:GeneID:5247117 Probab=100.00 E-value=1.8e-69 Score=397.53 Aligned_cols=344 Identities=12% Similarity=0.091 Sum_probs=263.3 Q ss_pred CCcCCCCccccccccc------cccccCCCcchhhccccCceEEEECCC---ceeccChHHHHHHHHHHhccchhccccc Q lcl|Aclame:pro 1 MSRNKTRRAARAASAH------VRTANTDAPTEHHTDRAAQAEVFSFGD---PVEVLDRRELLDYVECMRMGQWYEPPMP 71 (368) Q Consensus 1 m~~~k~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~g~---p~~~~~~~~~~~~~~~~~~~~~~~~p~~ 71 (368) |....+.+........ ...++....... .+.... ..|. +...+...+|+.|+.++. ++++..|+. T Consensus 7 mg~f~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~-~~g~~v~~~~al~~~~V~~~i~~Ia-~~ia~lp~~ 80 (432) T protein:vir:81 7 LGLFGQLKAMFVPPDPVDIGGGQTFTPVNATARD----LGIIIS-DTGAAVNADAIMRLDAVAACVKLVS-QAIAAMPLT 80 (432) T ss_pred cchhhhhhhhcccccccccccccccccCccchhh----hccccc-ccCcccchHhhhccHHHHHHHHHHH-HhhhhCcee Confidence 3322211110000000 000111100000 000000 0122 334566677777776654 668888875 Q ss_pred HHHHHHHHHhcccccchhhhccchH-HhhccCCCCcCH-HHHHHHHHhHhhhCCeeEEEEecCCcceEEEEEeccccccc Q lcl|Aclame:pro 72 WDGLARSFRAAAHHSSAVYVKRNIL-VSTFIPHPLLSR-ATFERLVLDWQVFGNAYLERRENVLGGTIRLDTPLAKYVRR 149 (368) Q Consensus 72 ~~~l~~~~r~~~~~~~~~~~~~~~~-l~~~~~n~~~~~-~~~~~~~~~~ll~Gnay~~i~r~~~G~~~~L~~l~p~~v~~ 149 (368) + ++.... +.....+|+.. ++...||++++. +||+.++.+++++||||+++.|+ +|++++|+|++|..|++ T Consensus 81 ~------y~~~~~-g~~~~~~~~l~~lL~~~PN~~~t~~~f~~~l~~~lll~Gnayv~i~~~-~g~~~~L~~l~~~~v~v 152 (432) T protein:vir:81 81 M------YMRTPD-GRKEAVNHPLYTLLLDGPNSTQTAFDFWQVVVTRLLLDGTAYVRKVVT-DGRIESLQYLANDRLTI 152 (432) T ss_pred e------EEecCC-cceecccchHHHHHHhcccccCCHHHHHHHHHHHHhhcCCeEEEEEec-CCcEEEEEEEcCCceEE Confidence 3 333333 34444567644 556789998875 78889999999999999999997 59999999999999998 Q ss_pred ccCCCe---eEEEeCCceEEEEcCccEEEecCCCCcCCccccchhhHHHHHHHHHHHHHHHHHHHHhccCCCceeEEeCC Q lcl|Aclame:pro 150 GLDLNT---YFFVQNWQQPYTFAAGSVFHLQEPDINQEVYGLPEYLSALNATWLNESATLFRRRYYKNGSHAGFILYMTD 226 (368) Q Consensus 150 ~~~~~~---~~~~~~~~~~~~~~~~dviH~r~~~~~~~~~G~spi~~a~~~i~~~~~a~~~~~~~f~ng~~p~gil~~~~ 226 (368) ..+.++ |+++..+|..+.++++||||||.++ .++++|+||+.+++++|+++.++++|..++|+||++|+|||++++ T Consensus 153 ~~~~~g~~~y~~~~~~g~~~~~~~~~iih~r~~~-~dg~~G~spi~~~~~~i~~~~~~~~~~~~~f~ng~~~~gil~~~~ 231 (432) T protein:vir:81 153 TTDPKGNTAYRYRRTDGQMIDIPKQQIWKIMGYS-LDGENGLSAIRYGAQIFGTAIAAEAQAARAFRNGQLQSVYYQIDR 231 (432) T ss_pred EECCCCcEEEEEEecCceEEEEccccEEEecCCC-CCCcccccHHHHHHHHHHHHHHHHHHHHHHHhcCCCcceEEecCC Confidence 876553 4455668888999999999999876 478999999999999999999999999999999999999999875 Q ss_pred CCccHHHHHHHHHHHHHhccccccccccccccCccccccccccccchhhHHHHHHHHHHHHHHHHHHhCCChHHhccccc Q lcl|Aclame:pro 227 AAQKQEDVDTLREAMKSAKGPGNFRNLFMYAPNGKKDGIQLLPVSEVAAKDEFWNIKNVTRDDQLAAHRVPPQLMGIIPN 306 (368) Q Consensus 227 ~~l~~e~~~~~k~~~~~~~g~~n~~~~~~l~~~g~~~g~~~~pl~~~~~d~qf~e~~~~~~~~Ia~~fgVPp~~lg~~~~ 306 (368) .+++|+++++++.|+ |..|+|++++| +.|++|++++++++|+||+|++++++++||++|||||++||+.+. T Consensus 232 -~l~~e~~~~~~~~~~---~~~nag~~~vl-----~~g~~~~~l~~~~~d~q~le~~~~~~~~Ia~~fgVPp~~lg~~~~ 302 (432) T protein:vir:81 232 -FLTDDQYDSFAKKVS---GSVEAGRAPLL-----EGGMDVKSLGLNPVDAQLLQSRQYSVESICRFFGVPPSMIGHSSA 302 (432) T ss_pred -CCCHHHHHHHHHHHh---hhhcCCCceec-----CCCceEEEccCCHHHHHHHHHHHHHHHHHHHHhCCCHHHcCCcCC Confidence 689999999888775 55789999998 678999999999999999999999999999999999999998875 Q ss_pred -ccccccCHHHHHHHHHHHHHHHHHHHHH-HHHhhcCc------ceEeechhhhhcCChhhhhhhhhhcC Q lcl|Aclame:pro 307 -NTGGFGDVEKAAMVFARNEVKPLQDRLL-AINDWIGD------EVVRFAPYALGGHDQPAAAPGGQRSA 368 (368) Q Consensus 307 -~~~~~sn~e~~~~~f~~~tl~P~~~~ie-~l~~~l~~------~~~~F~~~~Llr~D~~~ra~~~~~~~ 368 (368) +.++++|+||+.+.|+++||.||++.|| ++|++|.. .+++||.++|+|+|.++|++..++.- T Consensus 303 ~~~~~~sn~eq~~~~f~~~tl~P~~~~ie~~l~~kLl~~~~~~~~~~~fd~~~llr~d~~~r~~~~~~~~ 372 (432) T protein:vir:81 303 GTTSWGSGIESQQLGFLTMTLSPWLRRIEQSIALNLLSPAERRRYFADFDTSALLRADSAARSSYYSQLV 372 (432) T ss_pred ccccccchHHHHHHHHHHHHHHHHHHHHHHHHHhhccCccccCceEEEeechhhhccCHHHHHHHHHHHH Confidence 3457799999999999999999999999 59988743 26999999999999999998877655 No 33 >protein:vir:8317 Length: 409 # NCBI annotation: gp34 # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:154 # MgeName: Corndog # Cross-refs: genbank:acc:NP_817885;genbank:gi:29566318;genbank:GeneID:1259513 Probab=100.00 E-value=2.3e-69 Score=396.87 Aligned_cols=336 Identities=13% Similarity=0.076 Sum_probs=250.4 Q ss_pred CCcCCCCccccccccccccccCCCcchhhccccCceEEEECCCcee-----ccChHHHHHHHHHHhccchhcccccHHHH Q lcl|Aclame:pro 1 MSRNKTRRAARAASAHVRTANTDAPTEHHTDRAAQAEVFSFGDPVE-----VLDRRELLDYVECMRMGQWYEPPMPWDGL 75 (368) Q Consensus 1 m~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~p~~-----~~~~~~~~~~~~~~~~~~~~~~p~~~~~l 75 (368) |.+-++......++ ..+...+ ....+....++.+..++ .+...+++.|+.++. ..++..|+.++ T Consensus 32 ~~~~~~~~~~~~~~----~~~~~~~----~~~~g~~~~~~~~~~~~~t~~~~~~~~~v~acV~~Ia-~~iA~lpl~~~-- 100 (409) T protein:vir:83 32 MVEFRGPEEEPEAR----ALPWIRP----TAWSGYPESWATPSWGSAQDKLRTLIDVAWACIDLNA-SVLSSMPIYRM-- 100 (409) T ss_pred eeeccCCCcchhhh----hcccccc----cccccccccccccCccccchhhHhhhHHHHHHHHHHH-HhhccCceEEe-- Confidence 33222111111111 0111000 01111112222222222 233344555555544 56778787532 Q ss_pred HHHHHhcccccchhhhccchHHhhccCCCCcCH-HHHHHHHHhHhhhCCeeEEE-EecCCcceEEEEEecccccccccCC Q lcl|Aclame:pro 76 ARSFRAAAHHSSAVYVKRNILVSTFIPHPLLSR-ATFERLVLDWQVFGNAYLER-RENVLGGTIRLDTPLAKYVRRGLDL 153 (368) Q Consensus 76 ~~~~r~~~~~~~~~~~~~~~~l~~~~~n~~~~~-~~~~~~~~~~ll~Gnay~~i-~r~~~G~~~~L~~l~p~~v~~~~~~ 153 (368) +. +. . .+....++...||++++. +|++.++.++++ ||+|+++ .|+.+|+|++|+||+|..|++..+. T Consensus 101 ----~~----~~-~-~~~~~~ll~~~PN~~~t~~~f~~~l~~~lll-Gnay~~~i~r~~~G~~~~L~pl~p~~v~v~~~~ 169 (409) T protein:vir:83 101 ----RN----GR-I-IDSVAWMSNPDPEVYTSWQEFAKQLFWDFQL-GEAFVLPMAHGSDGYPIRFRVVPPWLVNVELKK 169 (409) T ss_pred ----eC----Cc-c-ccchhhhcccCCCCCCCHHHHHHHHHHHHhh-CCcEEEEEEECCCCcEEEEEEECCcceEEEEcC Confidence 21 11 1 122234566789998875 788888889877 9999985 5888999999999999999987776 Q ss_pred CeeEEEeCCceEEEEcCccEEEecCCCCcCCccccchhhHHHHHHHHHHHHHHHHHHHHhccCCCceeEEeCCCCccHHH Q lcl|Aclame:pro 154 NTYFFVQNWQQPYTFAAGSVFHLQEPDINQEVYGLPEYLSALNATWLNESATLFRRRYYKNGSHAGFILYMTDAAQKQED 233 (368) Q Consensus 154 ~~~~~~~~~~~~~~~~~~dviH~r~~~~~~~~~G~spi~~a~~~i~~~~~a~~~~~~~f~ng~~p~gil~~~~~~l~~e~ 233 (368) ++.+.++.++ ...++||||||.+++.+++||+||+.+++++|.++.++++|..++|+||++|+|||++++ .+++|+ T Consensus 170 ~g~~~y~~~~---~~~~~eiiHir~~~~~~~~~G~spi~~~~~~i~~~~a~~~~~~~~f~nga~p~gil~~~~-~ls~e~ 245 (409) T protein:vir:83 170 GARREYRIGG---LNVTDEILHIRYQGNTADAHGHGPLESAAPRQVVIGLLQKYVQNLAETGGVPLYWLGVER-RLSETE 245 (409) T ss_pred CceEEEEEcc---ccCccceEEeCCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhcCCCcceEeecCC-CCCHHH Confidence 6543333333 234689999999888899999999999999999999999999999999999999999875 699999 Q ss_pred HHHHHHHHHHhccccccccccccccCcccccccc-ccccchhhHHHHHHHHHHHHHHHHHHhCCChHHhccccc-ccccc Q lcl|Aclame:pro 234 VDTLREAMKSAKGPGNFRNLFMYAPNGKKDGIQL-LPVSEVAAKDEFWNIKNVTRDDQLAAHRVPPQLMGIIPN-NTGGF 311 (368) Q Consensus 234 ~~~~k~~~~~~~g~~n~~~~~~l~~~g~~~g~~~-~pl~~~~~d~qf~e~~~~~~~~Ia~~fgVPp~~lg~~~~-~~~~~ 311 (368) ++++++.|++.++ +|+|+++++ +.|+++ ++++++++|+||+|++++++++||++|||||++||+.++ ++.|| T Consensus 246 ~~~~~~~~~~~~~-~nag~~~il-----~~g~~~~~~~~~s~~d~q~le~r~~~~~eIa~~fgVPp~llg~~~~~~~~ty 319 (409) T protein:vir:83 246 AVDLMDRWIESRS-KYAGHPALV-----TGGATLNQAKSMSAQDLSLMELTQFNEARIAILLGVPPFLVGLPGATGSLTY 319 (409) T ss_pred HHHHHHHHHHhhC-CccCcccee-----cCCcccccccCCCHHHHHHHHHHHhhHHHHHHHhCCCHHHccCCCCcccccc Confidence 9999999987654 489999888 455665 689999999999999999999999999999999998764 45689 Q ss_pred cCHHHHHHHHHHHHHHHHHHHHHH-HHhhcC--cceEeechhhhhcCChhhhhhhhhhcC Q lcl|Aclame:pro 312 GDVEKAAMVFARNEVKPLQDRLLA-INDWIG--DEVVRFAPYALGGHDQPAAAPGGQRSA 368 (368) Q Consensus 312 sn~e~~~~~f~~~tl~P~~~~ie~-l~~~l~--~~~~~F~~~~Llr~D~~~ra~~~~~~~ 368 (368) +|+||+.+.|+++||.||+++||+ +|++|. .++++||.++|+|+|.++|++..++.- T Consensus 320 sn~eq~~~~f~~~tL~P~~~~ie~~l~~~Ll~~~~~~~f~~~~llr~d~~~r~~~~~~~~ 379 (409) T protein:vir:83 320 SNIEQLFSFHDRSSLRPKATAVMAALDRWALPSPQHLELNRDDYTRPSLVERATAYKIMI 379 (409) T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCcEEEeehhhhhccCHHHHHHHHHHHH Confidence 999999999999999999999995 998874 358999999999999999999877654 No 34 >protein:vir:79984 Length: 441 # NCBI annotation: portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:1875 # MgeName: tp310-3 # Cross-refs: genbank:acc:YP_001430000;genbank:gi:156604055;genbank:GeneID:5525444 Probab=100.00 E-value=1.2e-68 Score=392.98 Aligned_cols=345 Identities=13% Similarity=0.162 Sum_probs=257.3 Q ss_pred CCc---------CCCCcccc--------ccccccccccCCCcc-hhhccccCceE--EEECCCceeccChHHHHHHHHHH Q lcl|Aclame:pro 1 MSR---------NKTRRAAR--------AASAHVRTANTDAPT-EHHTDRAAQAE--VFSFGDPVEVLDRRELLDYVECM 60 (368) Q Consensus 1 m~~---------~k~~~~~~--------~~~~~~~~~~~~~~~-~~~~~~~~~~~--~~~~g~p~~~~~~~~~~~~~~~~ 60 (368) |-| .|+|++.| +.+..++........ ........+.+ ....-.++..+...+|+.|+.++ T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lf~~~e~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~V~~cv~~I 80 (441) T protein:vir:79 1 MHWYNTDCYFVDFKSRKQSRKELVVVGIFYKNEKRDLQYNEDDLQMMVQTLPGFQGTKLRQYKDIEAIRHSDIFTAVMMI 80 (441) T ss_pred CccccCccccccccccccchhhhhccccccccccccccCCCcchHHHHHHhcccCcccccccchhhhhccHHHHHHHHHH Confidence 222 12222221 122223322111111 11111111000 00011134456677777777765 Q ss_pred hccchhcccccHHHHHHHHHhcccccchhhhccc-hHHhhccCCCCcCH-HHHHHHHHhHhhhCCeeEEEEecCCcceEE Q lcl|Aclame:pro 61 RMGQWYEPPMPWDGLARSFRAAAHHSSAVYVKRN-ILVSTFIPHPLLSR-ATFERLVLDWQVFGNAYLERRENVLGGTIR 138 (368) Q Consensus 61 ~~~~~~~~p~~~~~l~~~~r~~~~~~~~~~~~~~-~~l~~~~~n~~~~~-~~~~~~~~~~ll~Gnay~~i~r~~~G~~~~ 138 (368) . .+++..|+.+. + .+ .+..+|+ ..++...|||+++. +||+.++.+++++||||++|+|+..|+|++ T Consensus 81 a-~~iA~lp~~~~------~----~~-~~~~~~~~~~lL~~~PN~~~t~~~f~~~~~~~lll~Gnay~~i~r~~~G~~~~ 148 (441) T protein:vir:79 81 A-SDLARMPIRVT------V----NG-QINYSDRIVNLLNTRPNPMYNGYIFKLVVFVSALLTSHGYIEITRDKTGEPMN 148 (441) T ss_pred H-HhhccCceeee------c----Cc-cccccchHHHHHhcccCcCCCHHHHHHHHHHHHhhcCCeEEEEEECCCCcEEE Confidence 4 56788886532 2 12 2233454 34556789998875 788899999999999999999999999999 Q ss_pred EEEecccccccccCCCe--eEEEe-----CCceEEEEcCccEEEecCCCCcCCccccchhhHHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 139 LDTPLAKYVRRGLDLNT--YFFVQ-----NWQQPYTFAAGSVFHLQEPDINQEVYGLPEYLSALNATWLNESATLFRRRY 211 (368) Q Consensus 139 L~~l~p~~v~~~~~~~~--~~~~~-----~~~~~~~~~~~dviH~r~~~~~~~~~G~spi~~a~~~i~~~~~a~~~~~~~ 211 (368) |+|++|+.|++..+.++ +|.+. ..+....++++||||||.++ .++++|+||+.+++++|+++.++++|..++ T Consensus 149 L~~i~~~~v~v~~d~~g~~~~~~~~~~~~~~~~~~~~~~~dvih~k~~~-~dg~~G~spl~~~~~~i~~~~~~~~~~~~~ 227 (441) T protein:vir:79 149 LTFRKTSEIELKSDARGRLYYFHQRIDSNGNNIERNVKFEDMLDIKFYS-LDGINGLSLLDTLSRTIESDNNGKDFLNNF 227 (441) T ss_pred EEEEcCceeEEEECCCccEEEEEEEeccCCceeEEEEccccEEEeccCC-CCCccccCHHHHHHHHHHHHHHHHHHHHHH Confidence 99999999998876553 33322 22345789999999999875 578999999999999999999999999999 Q ss_pred HhccCCCceeEEeCCCCccHHHHHHHHHHHHHhc-cccccccccccccCccccccccccccchhhHHHHHHHHHHHHHHH Q lcl|Aclame:pro 212 YKNGSHAGFILYMTDAAQKQEDVDTLREAMKSAK-GPGNFRNLFMYAPNGKKDGIQLLPVSEVAAKDEFWNIKNVTRDDQ 290 (368) Q Consensus 212 f~ng~~p~gil~~~~~~l~~e~~~~~k~~~~~~~-g~~n~~~~~~l~~~g~~~g~~~~pl~~~~~d~qf~e~~~~~~~~I 290 (368) |+||++|+|||++++...++++++++++.|++.+ |..|+|++++| +.|++|+|++++++|+||+|++++++++| T Consensus 228 f~ng~~p~gil~~~~~~~~~e~~e~~r~~~~~~~~G~~nag~~~vl-----~~G~~~~~l~~~~~d~q~~e~~~~~~~~I 302 (441) T protein:vir:79 228 LRNGTHAGGILKMKGVLDNKKARDRAREEFHKSFSGTKQAGKVVVL-----DESMTFDQLEVDTEVLKLIRENKSSTREI 302 (441) T ss_pred HhccCCCcEEEEcCCCCCCHHHHHHHHHHHHHHhcCccccCcceec-----CCCceEEEccCChhHHHHHHHHHHhHHHH Confidence 9999999999999876667899999999998765 56899999988 67899999999999999999999999999 Q ss_pred HHHhCCChHHhcccccccccccCHHHHHHHHHHHHHHHHHHHHH-HHHhhcCcc----eEeechhhhhcCChhhhhhhhh Q lcl|Aclame:pro 291 LAAHRVPPQLMGIIPNNTGGFGDVEKAAMVFARNEVKPLQDRLL-AINDWIGDE----VVRFAPYALGGHDQPAAAPGGQ 365 (368) Q Consensus 291 a~~fgVPp~~lg~~~~~~~~~sn~e~~~~~f~~~tl~P~~~~ie-~l~~~l~~~----~~~F~~~~Llr~D~~~ra~~~~ 365 (368) |++|||||++||... .+ ++.+++...|. +||.||+++|| +||++|.+. +++||.++|+|+|.++|++..+ T Consensus 303 a~~fgVPp~~lg~~~---~~-~s~~q~~~~~~-~tl~P~~~~ie~eln~kl~~~~~~~~~~fd~~~llr~D~~~~~~~~~ 377 (441) T protein:vir:79 303 AGVFGIPLHKFGIET---AN-MSITDANLDYL-STLKPYITCVCAELNFKFNDEYVNREFKFDTTEIRVVDEKTQAEIDK 377 (441) T ss_pred HHHhCCCHHHcCCCC---CC-ccHHHHHHHHH-HHHHHHHHHHHHHHhhhccccccCceEEeechhhhccCHHHHHHHHH Confidence 999999999999632 22 35677777665 69999999998 599988643 6899999999999999999887 Q ss_pred hcC Q lcl|Aclame:pro 366 RSA 368 (368) Q Consensus 366 ~~~ 368 (368) .+- T Consensus 378 ~~i 380 (441) T protein:vir:79 378 INI 380 (441) T ss_pred HHH Confidence 764 No 35 >protein:vir:9408 Length: 441 # NCBI annotation: portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:167 # MgeName: phi 13 # Cross-refs: genbank:acc:NP_803386;genbank:gi:29028698;genbank:GeneID:1258164 Probab=100.00 E-value=1.2e-68 Score=392.98 Aligned_cols=345 Identities=13% Similarity=0.162 Sum_probs=257.3 Q ss_pred CCc---------CCCCcccc--------ccccccccccCCCcc-hhhccccCceE--EEECCCceeccChHHHHHHHHHH Q lcl|Aclame:pro 1 MSR---------NKTRRAAR--------AASAHVRTANTDAPT-EHHTDRAAQAE--VFSFGDPVEVLDRRELLDYVECM 60 (368) Q Consensus 1 m~~---------~k~~~~~~--------~~~~~~~~~~~~~~~-~~~~~~~~~~~--~~~~g~p~~~~~~~~~~~~~~~~ 60 (368) |-| .|+|++.| +.+..++........ ........+.+ ....-.++..+...+|+.|+.++ T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lf~~~e~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~V~~cv~~I 80 (441) T protein:vir:94 1 MHWYNTDCYFVDFKSRKQSRKELVVVGIFYKNEKRDLQYNEDDLQMMVQTLPGFQGTKLRQYKDIEAIRHSDIFTAVMMI 80 (441) T ss_pred CccccCccccccccccccchhhhhccccccccccccccCCCcchHHHHHHhcccCcccccccchhhhhccHHHHHHHHHH Confidence 222 12222221 122223322111111 11111111000 00011134456677777777765 Q ss_pred hccchhcccccHHHHHHHHHhcccccchhhhccc-hHHhhccCCCCcCH-HHHHHHHHhHhhhCCeeEEEEecCCcceEE Q lcl|Aclame:pro 61 RMGQWYEPPMPWDGLARSFRAAAHHSSAVYVKRN-ILVSTFIPHPLLSR-ATFERLVLDWQVFGNAYLERRENVLGGTIR 138 (368) Q Consensus 61 ~~~~~~~~p~~~~~l~~~~r~~~~~~~~~~~~~~-~~l~~~~~n~~~~~-~~~~~~~~~~ll~Gnay~~i~r~~~G~~~~ 138 (368) . .+++..|+.+. + .+ .+..+|+ ..++...|||+++. +||+.++.+++++||||++|+|+..|+|++ T Consensus 81 a-~~iA~lp~~~~------~----~~-~~~~~~~~~~lL~~~PN~~~t~~~f~~~~~~~lll~Gnay~~i~r~~~G~~~~ 148 (441) T protein:vir:94 81 A-SDLARMPIRVT------V----NG-QINYSDRIVNLLNTRPNPMYNGYIFKLVVFVSALLTSHGYIEITRDKTGEPMN 148 (441) T ss_pred H-HhhccCceeee------c----Cc-cccccchHHHHHhcccCcCCCHHHHHHHHHHHHhhcCCeEEEEEECCCCcEEE Confidence 4 56788886532 2 12 2233454 34556789998875 788899999999999999999999999999 Q ss_pred EEEecccccccccCCCe--eEEEe-----CCceEEEEcCccEEEecCCCCcCCccccchhhHHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 139 LDTPLAKYVRRGLDLNT--YFFVQ-----NWQQPYTFAAGSVFHLQEPDINQEVYGLPEYLSALNATWLNESATLFRRRY 211 (368) Q Consensus 139 L~~l~p~~v~~~~~~~~--~~~~~-----~~~~~~~~~~~dviH~r~~~~~~~~~G~spi~~a~~~i~~~~~a~~~~~~~ 211 (368) |+|++|+.|++..+.++ +|.+. ..+....++++||||||.++ .++++|+||+.+++++|+++.++++|..++ T Consensus 149 L~~i~~~~v~v~~d~~g~~~~~~~~~~~~~~~~~~~~~~~dvih~k~~~-~dg~~G~spl~~~~~~i~~~~~~~~~~~~~ 227 (441) T protein:vir:94 149 LTFRKTSEIELKSDARGRLYYFHQRIDSNGNNIERNVKFEDMLDIKFYS-LDGINGLSLLDTLSRTIESDNNGKDFLNNF 227 (441) T ss_pred EEEEcCceeEEEECCCccEEEEEEEeccCCceeEEEEccccEEEeccCC-CCCccccCHHHHHHHHHHHHHHHHHHHHHH Confidence 99999999998876553 33322 22345789999999999875 578999999999999999999999999999 Q ss_pred HhccCCCceeEEeCCCCccHHHHHHHHHHHHHhc-cccccccccccccCccccccccccccchhhHHHHHHHHHHHHHHH Q lcl|Aclame:pro 212 YKNGSHAGFILYMTDAAQKQEDVDTLREAMKSAK-GPGNFRNLFMYAPNGKKDGIQLLPVSEVAAKDEFWNIKNVTRDDQ 290 (368) Q Consensus 212 f~ng~~p~gil~~~~~~l~~e~~~~~k~~~~~~~-g~~n~~~~~~l~~~g~~~g~~~~pl~~~~~d~qf~e~~~~~~~~I 290 (368) |+||++|+|||++++...++++++++++.|++.+ |..|+|++++| +.|++|+|++++++|+||+|++++++++| T Consensus 228 f~ng~~p~gil~~~~~~~~~e~~e~~r~~~~~~~~G~~nag~~~vl-----~~G~~~~~l~~~~~d~q~~e~~~~~~~~I 302 (441) T protein:vir:94 228 LRNGTHAGGILKMKGVLDNKKARDRAREEFHKSFSGTKQAGKVVVL-----DESMTFDQLEVDTEVLKLIRENKSSTREI 302 (441) T ss_pred HhccCCCcEEEEcCCCCCCHHHHHHHHHHHHHHhcCccccCcceec-----CCCceEEEccCChhHHHHHHHHHHhHHHH Confidence 9999999999999876667899999999998765 56899999988 67899999999999999999999999999 Q ss_pred HHHhCCChHHhcccccccccccCHHHHHHHHHHHHHHHHHHHHH-HHHhhcCcc----eEeechhhhhcCChhhhhhhhh Q lcl|Aclame:pro 291 LAAHRVPPQLMGIIPNNTGGFGDVEKAAMVFARNEVKPLQDRLL-AINDWIGDE----VVRFAPYALGGHDQPAAAPGGQ 365 (368) Q Consensus 291 a~~fgVPp~~lg~~~~~~~~~sn~e~~~~~f~~~tl~P~~~~ie-~l~~~l~~~----~~~F~~~~Llr~D~~~ra~~~~ 365 (368) |++|||||++||... .+ ++.+++...|. +||.||+++|| +||++|.+. +++||.++|+|+|.++|++..+ T Consensus 303 a~~fgVPp~~lg~~~---~~-~s~~q~~~~~~-~tl~P~~~~ie~eln~kl~~~~~~~~~~fd~~~llr~D~~~~~~~~~ 377 (441) T protein:vir:94 303 AGVFGIPLHKFGIET---AN-MSITDANLDYL-STLKPYITCVCAELNFKFNDEYVNREFKFDTTEIRVVDEKTQAEIDK 377 (441) T ss_pred HHHhCCCHHHcCCCC---CC-ccHHHHHHHHH-HHHHHHHHHHHHHHhhhccccccCceEEeechhhhccCHHHHHHHHH Confidence 999999999999632 22 35677777665 69999999998 599988643 6899999999999999999887 Q ss_pred hcC Q lcl|Aclame:pro 366 RSA 368 (368) Q Consensus 366 ~~~ 368 (368) .+- T Consensus 378 ~~i 380 (441) T protein:vir:94 378 INI 380 (441) T ss_pred HHH Confidence 764 No 36 >protein:vir:107605 Length: 432 # NCBI annotation: phage portal protein, HK97 family # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:1491 # MgeName: Gamma # Cross-refs: genbank:acc:YP_338186;genbank:gi:77020175;genbank:GeneID:3703736 Probab=100.00 E-value=1.2e-68 Score=392.89 Aligned_cols=348 Identities=14% Similarity=0.125 Sum_probs=270.1 Q ss_pred CCcC------CCCccccccccccccccCCCcchhhccccCceEEEECCCceeccChHHHHHHHHHHhccchhcccccHHH Q lcl|Aclame:pro 1 MSRN------KTRRAARAASAHVRTANTDAPTEHHTDRAAQAEVFSFGDPVEVLDRRELLDYVECMRMGQWYEPPMPWDG 74 (368) Q Consensus 1 m~~~------k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 74 (368) |+-. .+..++ .+.+....+..............+...++ +..++...+++.|+.++. ..++..|+.+ T Consensus 1 M~~~~r~~~~~~~~~r-~~~~~~~~~~~~~~~~~~~g~~~~~~~v~---~~~al~~~~v~~~i~~ia-~~ia~lp~~~-- 73 (432) T protein:vir:10 1 MKIVDSVKKFFNFEKR-QTSQVIELNKDDEKLLEWLGISPSTISVK---GKNALKVATVFACIKILS-ESVSKLPLKI-- 73 (432) T ss_pred CChHHHHHHhcCcccc-CcccccccCCchHHHHHHhCCCcCccccc---hhhhhccHHHHHHHHHHH-HhhccCceEE-- Confidence 3321 111111 11111111111111111221111111111 334566667777777654 5677888653 Q ss_pred HHHHHHhcccccchhhhccchH-HhhccCCCCcCH-HHHHHHHHhHhhhCCeeEEEEecCCcceEEEEEecccccccccC Q lcl|Aclame:pro 75 LARSFRAAAHHSSAVYVKRNIL-VSTFIPHPLLSR-ATFERLVLDWQVFGNAYLERRENVLGGTIRLDTPLAKYVRRGLD 152 (368) Q Consensus 75 l~~~~r~~~~~~~~~~~~~~~~-l~~~~~n~~~~~-~~~~~~~~~~ll~Gnay~~i~r~~~G~~~~L~~l~p~~v~~~~~ 152 (368) ++... .+.....+|+.. ++...|||+++. +|++.++.+++++||+|++|.|+..|++++|+|++|..|++..+ T Consensus 74 ----~~~~~-~~~~~~~~~~l~~lL~~~PN~~~t~~~f~~~~~~~lll~Gnay~~i~r~~~G~~~~L~~i~~~~v~v~~d 148 (432) T protein:vir:10 74 ----YQEDE-YGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVYID 148 (432) T ss_pred ----EEecC-CceeeccccHHHHHHHhhccCCCCHHHHHHHHHHHHhhcCCeEEEEEECCCCcEEEEEEEcCceeEEEEc Confidence 33332 233344566643 455689998875 78899999999999999999999999999999999999988665 Q ss_pred CC--------eeEEEeCCceEEEEcCccEEEecCCCCcCCccccchhhHHHHHHHHHHHHHHHHHHHHhccCCCceeEEe Q lcl|Aclame:pro 153 LN--------TYFFVQNWQQPYTFAAGSVFHLQEPDINQEVYGLPEYLSALNATWLNESATLFRRRYYKNGSHAGFILYM 224 (368) Q Consensus 153 ~~--------~~~~~~~~~~~~~~~~~dviH~r~~~~~~~~~G~spi~~a~~~i~~~~~a~~~~~~~f~ng~~p~gil~~ 224 (368) .. .||.+..+|....|+++||||||.+.+.++++|+||+..++.+|+.+.++++|..++|+||++|+|||++ T Consensus 149 ~~~~~~~~~~~~y~~~~~g~~~~~~~~eiih~r~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~p~gil~~ 228 (432) T protein:vir:10 149 DVGLLNSKTKMWYVVNTGGQQRVLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQY 228 (432) T ss_pred CcccccccceEEEEEecCCeEEEEccccEEEecCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhccCCccEEEEc Confidence 32 3567778888899999999999987778999999999999999999999999999999999999999998 Q ss_pred CCCCccHHHHHHHHHHHHHhc-cccccccccccccCccccccccccccchhhHHHHHHHHHHHHHHHHHHhCCChHHhcc Q lcl|Aclame:pro 225 TDAAQKQEDVDTLREAMKSAK-GPGNFRNLFMYAPNGKKDGIQLLPVSEVAAKDEFWNIKNVTRDDQLAAHRVPPQLMGI 303 (368) Q Consensus 225 ~~~~l~~e~~~~~k~~~~~~~-g~~n~~~~~~l~~~g~~~g~~~~pl~~~~~d~qf~e~~~~~~~~Ia~~fgVPp~~lg~ 303 (368) ++ .+++|+.+++++.|++.+ |..|+++++++ +.|++|++++++++|+||+|++++++++||++|||||++||. T Consensus 229 ~~-~l~~e~~~~~~~~~~~~~~g~~n~~~~~vl-----~~g~~~~~l~~~~~d~q~~e~~~~~~~~Ia~~fgVP~~~lg~ 302 (432) T protein:vir:10 229 VG-DLNEDAKKVFRENFESMSSGLQNSHRIALM-----PVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLND 302 (432) T ss_pred CC-CCCHHHHHHHHHHHHHHhcccccCCcceec-----CCCceEEEccCChhHHHHHHHHHHHHHHHHHHhCCCHHHhCC Confidence 75 689999999999998865 55899999988 578999999999999999999999999999999999999998 Q ss_pred cccccccccCHHHHHHHHHHHHHHHHHHHHH-HHHhhcCc-------ceEeechhhhhcCChhhhhhhhhhcC Q lcl|Aclame:pro 304 IPNNTGGFGDVEKAAMVFARNEVKPLQDRLL-AINDWIGD-------EVVRFAPYALGGHDQPAAAPGGQRSA 368 (368) Q Consensus 304 ~~~~~~~~sn~e~~~~~f~~~tl~P~~~~ie-~l~~~l~~-------~~~~F~~~~Llr~D~~~ra~~~~~~~ 368 (368) .++ ++|+|+|++.+.|+++||.||++.|| ++|++|.+ .+++||.+.|+++|.+++++..++.- T Consensus 303 ~~~--~~~s~~e~~~~~~~~~~l~P~~~~ie~~ln~kLl~~~~~~~g~~~~fd~~~l~~~d~~~~~~~~~~~~ 373 (432) T protein:vir:10 303 LSK--ATLNNIEQQQQQFYTDTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAILRADIKTRYEAYRTGI 373 (432) T ss_pred CCC--CCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhhcChhhcCCCcEEEeechhhhcCCHHHHHHHHHHHH Confidence 654 68999999999999999999999998 58987743 26899999999999999999876654 No 37 >protein:vir:102855 Length: 432 # NCBI annotation: phage portal protein, HK97 family # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:1492 # MgeName: Cherry # Cross-refs: genbank:acc:YP_338135;genbank:gi:77020228;genbank:GeneID:3703764 Probab=100.00 E-value=1.2e-68 Score=392.89 Aligned_cols=348 Identities=14% Similarity=0.125 Sum_probs=270.1 Q ss_pred CCcC------CCCccccccccccccccCCCcchhhccccCceEEEECCCceeccChHHHHHHHHHHhccchhcccccHHH Q lcl|Aclame:pro 1 MSRN------KTRRAARAASAHVRTANTDAPTEHHTDRAAQAEVFSFGDPVEVLDRRELLDYVECMRMGQWYEPPMPWDG 74 (368) Q Consensus 1 m~~~------k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 74 (368) |+-. .+..++ .+.+....+..............+...++ +..++...+++.|+.++. ..++..|+.+ T Consensus 1 M~~~~r~~~~~~~~~r-~~~~~~~~~~~~~~~~~~~g~~~~~~~v~---~~~al~~~~v~~~i~~ia-~~ia~lp~~~-- 73 (432) T protein:vir:10 1 MKIVDSVKKFFNFEKR-QTSQVIELNKDDEKLLEWLGISPSTISVK---GKNALKVATVFACIKILS-ESVSKLPLKI-- 73 (432) T ss_pred CChHHHHHHhcCcccc-CcccccccCCchHHHHHHhCCCcCccccc---hhhhhccHHHHHHHHHHH-HhhccCceEE-- Confidence 3321 111111 11111111111111111221111111111 334566667777777654 5677888653 Q ss_pred HHHHHHhcccccchhhhccchH-HhhccCCCCcCH-HHHHHHHHhHhhhCCeeEEEEecCCcceEEEEEecccccccccC Q lcl|Aclame:pro 75 LARSFRAAAHHSSAVYVKRNIL-VSTFIPHPLLSR-ATFERLVLDWQVFGNAYLERRENVLGGTIRLDTPLAKYVRRGLD 152 (368) Q Consensus 75 l~~~~r~~~~~~~~~~~~~~~~-l~~~~~n~~~~~-~~~~~~~~~~ll~Gnay~~i~r~~~G~~~~L~~l~p~~v~~~~~ 152 (368) ++... .+.....+|+.. ++...|||+++. +|++.++.+++++||+|++|.|+..|++++|+|++|..|++..+ T Consensus 74 ----~~~~~-~~~~~~~~~~l~~lL~~~PN~~~t~~~f~~~~~~~lll~Gnay~~i~r~~~G~~~~L~~i~~~~v~v~~d 148 (432) T protein:vir:10 74 ----YQEDE-YGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVYID 148 (432) T ss_pred ----EEecC-CceeeccccHHHHHHHhhccCCCCHHHHHHHHHHHHhhcCCeEEEEEECCCCcEEEEEEEcCceeEEEEc Confidence 33332 233344566643 455689998875 78899999999999999999999999999999999999988665 Q ss_pred CC--------eeEEEeCCceEEEEcCccEEEecCCCCcCCccccchhhHHHHHHHHHHHHHHHHHHHHhccCCCceeEEe Q lcl|Aclame:pro 153 LN--------TYFFVQNWQQPYTFAAGSVFHLQEPDINQEVYGLPEYLSALNATWLNESATLFRRRYYKNGSHAGFILYM 224 (368) Q Consensus 153 ~~--------~~~~~~~~~~~~~~~~~dviH~r~~~~~~~~~G~spi~~a~~~i~~~~~a~~~~~~~f~ng~~p~gil~~ 224 (368) .. .||.+..+|....|+++||||||.+.+.++++|+||+..++.+|+.+.++++|..++|+||++|+|||++ T Consensus 149 ~~~~~~~~~~~~y~~~~~g~~~~~~~~eiih~r~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~p~gil~~ 228 (432) T protein:vir:10 149 DVGLLNSKTKMWYVVNTGGQQRVLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQY 228 (432) T ss_pred CcccccccceEEEEEecCCeEEEEccccEEEecCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhccCCccEEEEc Confidence 32 3567778888899999999999987778999999999999999999999999999999999999999998 Q ss_pred CCCCccHHHHHHHHHHHHHhc-cccccccccccccCccccccccccccchhhHHHHHHHHHHHHHHHHHHhCCChHHhcc Q lcl|Aclame:pro 225 TDAAQKQEDVDTLREAMKSAK-GPGNFRNLFMYAPNGKKDGIQLLPVSEVAAKDEFWNIKNVTRDDQLAAHRVPPQLMGI 303 (368) Q Consensus 225 ~~~~l~~e~~~~~k~~~~~~~-g~~n~~~~~~l~~~g~~~g~~~~pl~~~~~d~qf~e~~~~~~~~Ia~~fgVPp~~lg~ 303 (368) ++ .+++|+.+++++.|++.+ |..|+++++++ +.|++|++++++++|+||+|++++++++||++|||||++||. T Consensus 229 ~~-~l~~e~~~~~~~~~~~~~~g~~n~~~~~vl-----~~g~~~~~l~~~~~d~q~~e~~~~~~~~Ia~~fgVP~~~lg~ 302 (432) T protein:vir:10 229 VG-DLNEDAKKVFRENFESMSSGLQNSHRIALM-----PVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLND 302 (432) T ss_pred CC-CCCHHHHHHHHHHHHHHhcccccCCcceec-----CCCceEEEccCChhHHHHHHHHHHHHHHHHHHhCCCHHHhCC Confidence 75 689999999999998865 55899999988 578999999999999999999999999999999999999998 Q ss_pred cccccccccCHHHHHHHHHHHHHHHHHHHHH-HHHhhcCc-------ceEeechhhhhcCChhhhhhhhhhcC Q lcl|Aclame:pro 304 IPNNTGGFGDVEKAAMVFARNEVKPLQDRLL-AINDWIGD-------EVVRFAPYALGGHDQPAAAPGGQRSA 368 (368) Q Consensus 304 ~~~~~~~~sn~e~~~~~f~~~tl~P~~~~ie-~l~~~l~~-------~~~~F~~~~Llr~D~~~ra~~~~~~~ 368 (368) .++ ++|+|+|++.+.|+++||.||++.|| ++|++|.+ .+++||.+.|+++|.+++++..++.- T Consensus 303 ~~~--~~~s~~e~~~~~~~~~~l~P~~~~ie~~ln~kLl~~~~~~~g~~~~fd~~~l~~~d~~~~~~~~~~~~ 373 (432) T protein:vir:10 303 LSK--ATLNNIEQQQQQFYTDTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAILRADIKTRYEAYRTGI 373 (432) T ss_pred CCC--CCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhhcChhhcCCCcEEEeechhhhcCCHHHHHHHHHHHH Confidence 654 68999999999999999999999998 58987743 26899999999999999999876654 No 38 >protein:vir:105002 Length: 432 # NCBI annotation: putative phage portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:1490 # MgeName: W Beta # Cross-refs: genbank:acc:YP_459967;genbank:gi:85701382;genbank:GeneID:3882143 Probab=100.00 E-value=1.2e-68 Score=392.89 Aligned_cols=348 Identities=14% Similarity=0.125 Sum_probs=270.1 Q ss_pred CCcC------CCCccccccccccccccCCCcchhhccccCceEEEECCCceeccChHHHHHHHHHHhccchhcccccHHH Q lcl|Aclame:pro 1 MSRN------KTRRAARAASAHVRTANTDAPTEHHTDRAAQAEVFSFGDPVEVLDRRELLDYVECMRMGQWYEPPMPWDG 74 (368) Q Consensus 1 m~~~------k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 74 (368) |+-. .+..++ .+.+....+..............+...++ +..++...+++.|+.++. ..++..|+.+ T Consensus 1 M~~~~r~~~~~~~~~r-~~~~~~~~~~~~~~~~~~~g~~~~~~~v~---~~~al~~~~v~~~i~~ia-~~ia~lp~~~-- 73 (432) T protein:vir:10 1 MKIVDSVKKFFNFEKR-QTSQVIELNKDDEKLLEWLGISPSTISVK---GKNALKVATVFACIKILS-ESVSKLPLKI-- 73 (432) T ss_pred CChHHHHHHhcCcccc-CcccccccCCchHHHHHHhCCCcCccccc---hhhhhccHHHHHHHHHHH-HhhccCceEE-- Confidence 3321 111111 11111111111111111221111111111 334566667777777654 5677888653 Q ss_pred HHHHHHhcccccchhhhccchH-HhhccCCCCcCH-HHHHHHHHhHhhhCCeeEEEEecCCcceEEEEEecccccccccC Q lcl|Aclame:pro 75 LARSFRAAAHHSSAVYVKRNIL-VSTFIPHPLLSR-ATFERLVLDWQVFGNAYLERRENVLGGTIRLDTPLAKYVRRGLD 152 (368) Q Consensus 75 l~~~~r~~~~~~~~~~~~~~~~-l~~~~~n~~~~~-~~~~~~~~~~ll~Gnay~~i~r~~~G~~~~L~~l~p~~v~~~~~ 152 (368) ++... .+.....+|+.. ++...|||+++. +|++.++.+++++||+|++|.|+..|++++|+|++|..|++..+ T Consensus 74 ----~~~~~-~~~~~~~~~~l~~lL~~~PN~~~t~~~f~~~~~~~lll~Gnay~~i~r~~~G~~~~L~~i~~~~v~v~~d 148 (432) T protein:vir:10 74 ----YQEDE-YGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVYID 148 (432) T ss_pred ----EEecC-CceeeccccHHHHHHHhhccCCCCHHHHHHHHHHHHhhcCCeEEEEEECCCCcEEEEEEEcCceeEEEEc Confidence 33332 233344566643 455689998875 78899999999999999999999999999999999999988665 Q ss_pred CC--------eeEEEeCCceEEEEcCccEEEecCCCCcCCccccchhhHHHHHHHHHHHHHHHHHHHHhccCCCceeEEe Q lcl|Aclame:pro 153 LN--------TYFFVQNWQQPYTFAAGSVFHLQEPDINQEVYGLPEYLSALNATWLNESATLFRRRYYKNGSHAGFILYM 224 (368) Q Consensus 153 ~~--------~~~~~~~~~~~~~~~~~dviH~r~~~~~~~~~G~spi~~a~~~i~~~~~a~~~~~~~f~ng~~p~gil~~ 224 (368) .. .||.+..+|....|+++||||||.+.+.++++|+||+..++.+|+.+.++++|..++|+||++|+|||++ T Consensus 149 ~~~~~~~~~~~~y~~~~~g~~~~~~~~eiih~r~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~p~gil~~ 228 (432) T protein:vir:10 149 DVGLLNSKTKMWYVVNTGGQQRVLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQY 228 (432) T ss_pred CcccccccceEEEEEecCCeEEEEccccEEEecCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhccCCccEEEEc Confidence 32 3567778888899999999999987778999999999999999999999999999999999999999998 Q ss_pred CCCCccHHHHHHHHHHHHHhc-cccccccccccccCccccccccccccchhhHHHHHHHHHHHHHHHHHHhCCChHHhcc Q lcl|Aclame:pro 225 TDAAQKQEDVDTLREAMKSAK-GPGNFRNLFMYAPNGKKDGIQLLPVSEVAAKDEFWNIKNVTRDDQLAAHRVPPQLMGI 303 (368) Q Consensus 225 ~~~~l~~e~~~~~k~~~~~~~-g~~n~~~~~~l~~~g~~~g~~~~pl~~~~~d~qf~e~~~~~~~~Ia~~fgVPp~~lg~ 303 (368) ++ .+++|+.+++++.|++.+ |..|+++++++ +.|++|++++++++|+||+|++++++++||++|||||++||. T Consensus 229 ~~-~l~~e~~~~~~~~~~~~~~g~~n~~~~~vl-----~~g~~~~~l~~~~~d~q~~e~~~~~~~~Ia~~fgVP~~~lg~ 302 (432) T protein:vir:10 229 VG-DLNEDAKKVFRENFESMSSGLQNSHRIALM-----PVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLND 302 (432) T ss_pred CC-CCCHHHHHHHHHHHHHHhcccccCCcceec-----CCCceEEEccCChhHHHHHHHHHHHHHHHHHHhCCCHHHhCC Confidence 75 689999999999998865 55899999988 578999999999999999999999999999999999999998 Q ss_pred cccccccccCHHHHHHHHHHHHHHHHHHHHH-HHHhhcCc-------ceEeechhhhhcCChhhhhhhhhhcC Q lcl|Aclame:pro 304 IPNNTGGFGDVEKAAMVFARNEVKPLQDRLL-AINDWIGD-------EVVRFAPYALGGHDQPAAAPGGQRSA 368 (368) Q Consensus 304 ~~~~~~~~sn~e~~~~~f~~~tl~P~~~~ie-~l~~~l~~-------~~~~F~~~~Llr~D~~~ra~~~~~~~ 368 (368) .++ ++|+|+|++.+.|+++||.||++.|| ++|++|.+ .+++||.+.|+++|.+++++..++.- T Consensus 303 ~~~--~~~s~~e~~~~~~~~~~l~P~~~~ie~~ln~kLl~~~~~~~g~~~~fd~~~l~~~d~~~~~~~~~~~~ 373 (432) T protein:vir:10 303 LSK--ATLNNIEQQQQQFYTDTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAILRADIKTRYEAYRTGI 373 (432) T ss_pred CCC--CCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhhcChhhcCCCcEEEeechhhhcCCHHHHHHHHHHHH Confidence 654 68999999999999999999999998 58987743 26899999999999999999876654 No 39 >protein:vir:1380 Length: 422 # NCBI annotation: putative portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:314 # MgeName: phi3626 # Cross-refs: genbank:acc:NP_612832;genbank:gi:20065966;genbank:GeneID:935782 Probab=100.00 E-value=3.2e-68 Score=390.59 Aligned_cols=347 Identities=13% Similarity=0.121 Sum_probs=267.9 Q ss_pred CCcCCCCccccccccccccccCC-----CcchhhccccCceEEEECCCceeccChHHHHHHHHHHhccchhcccccHHHH Q lcl|Aclame:pro 1 MSRNKTRRAARAASAHVRTANTD-----APTEHHTDRAAQAEVFSFGDPVEVLDRRELLDYVECMRMGQWYEPPMPWDGL 75 (368) Q Consensus 1 m~~~k~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l 75 (368) |....+-.+++......++.+.. ..........+....++ -.+...+...+++.|+.++. ++++..|+.+. T Consensus 1 MG~f~~lf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~-v~~~~al~~~~v~~ci~~ia-~~iA~lp~~~~-- 76 (422) T protein:vir:13 1 MGFLRGLFNKKNNNDEKRSNYDEDIGIDISDSNFWEKFGIKLNFS-VRGKRALKENTVYVCTKIRA-ESIGKLSLKIY-- 76 (422) T ss_pred CchhhhhhhccCCccchhhhhhhccccccCcchhhhhccccCCcc-cchhhhhccHHHHHHHHHHH-HhhhhCceEEE-- Confidence 65443222222222222221111 00011111111000111 01234466677777776654 67888887642 Q ss_pred HHHHHhcccccchhhhccc-hHHhhccCCCCcCH-HHHHHHHHhHhhhCCeeEEEEecCCcceEEEEEecccccccccCC Q lcl|Aclame:pro 76 ARSFRAAAHHSSAVYVKRN-ILVSTFIPHPLLSR-ATFERLVLDWQVFGNAYLERRENVLGGTIRLDTPLAKYVRRGLDL 153 (368) Q Consensus 76 ~~~~r~~~~~~~~~~~~~~-~~l~~~~~n~~~~~-~~~~~~~~~~ll~Gnay~~i~r~~~G~~~~L~~l~p~~v~~~~~~ 153 (368) +.. ....+|+ ..++...|||+++. +|++.++.+++++||||++|.|+..|+|++|+|++|.+|++..+. T Consensus 77 ----~~~-----~~~~~~~~~~lL~~~PN~~~t~~~f~~~~~~~lll~Gna~~~i~r~~~G~~~~L~~i~~~~v~~~~~~ 147 (422) T protein:vir:13 77 ----KDK-----EEYKEHELYYLLRYKPNPLMSSINFWKCLETQRTLKGNAYAYIERDRKGKIIGLYPINSDNVTKIIDD 147 (422) T ss_pred ----ecC-----cccccchHHHHHhhhcccCCCHHHHHHHHHHHHhhcCCeEEEEEECCCCcEEEEEEECCcceEEEEcC Confidence 211 1122444 34556689998875 788999999999999999999999999999999999999987765 Q ss_pred Ce---------eEEEeCCceEEEEcCccEEEecCCCCcCCccccchhhHHHHHHHHHHHHHHHHHHHHhccCCCceeEEe Q lcl|Aclame:pro 154 NT---------YFFVQNWQQPYTFAAGSVFHLQEPDINQEVYGLPEYLSALNATWLNESATLFRRRYYKNGSHAGFILYM 224 (368) Q Consensus 154 ~~---------~~~~~~~~~~~~~~~~dviH~r~~~~~~~~~G~spi~~a~~~i~~~~~a~~~~~~~f~ng~~p~gil~~ 224 (368) ++ |.+...+|....+.++||||++.+.+.++++|+||+..+.++|+++.++++|..++|+||++|+|||++ T Consensus 148 ~~~~~~~~~~~y~~~~~~g~~~~~~~~eiih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~f~ng~~p~gil~~ 227 (422) T protein:vir:13 148 DNFLSSLSKVWYVVTDKNGKEHKLLPDEMLHFIGDITLDGLIGIKPLDYLRCTIENGRATQEFINKFFKNGLSIKGIVQY 227 (422) T ss_pred CcceeccceEEEEEEeCCCeEEEEcccceEEEcCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhccCCccEEEEe Confidence 43 233446788889999999999987677999999999999999999999999999999999999999998 Q ss_pred CCCCccHHHHHHHHHHHHHhc-cccccccccccccCccccccccccccchhhHHHHHHHHHHHHHHHHHHhCCChHHhcc Q lcl|Aclame:pro 225 TDAAQKQEDVDTLREAMKSAK-GPGNFRNLFMYAPNGKKDGIQLLPVSEVAAKDEFWNIKNVTRDDQLAAHRVPPQLMGI 303 (368) Q Consensus 225 ~~~~l~~e~~~~~k~~~~~~~-g~~n~~~~~~l~~~g~~~g~~~~pl~~~~~d~qf~e~~~~~~~~Ia~~fgVPp~~lg~ 303 (368) ++ .+++|+.+++++.|++.+ |.+|+++++++ +.|++|+|++++++|+||+|++++++++||++|||||++||. T Consensus 228 ~~-~l~~e~~~~~~~~~~~~~~g~~n~~~~~vl-----~~g~~~~~l~~~~~d~q~le~~~~~~~~Ia~~fgVpp~~lg~ 301 (422) T protein:vir:13 228 VG-DLDEKAKKIFKKEFESMSNGLENAHSISLL-----PFGYQFQPISLSMADAQFLENSKLTKRELAATFGMKSYHLND 301 (422) T ss_pred CC-CCCHHHHHHHHHHHHHHhcCccccCCceec-----CCCceeeeccCChhHHHHHHHHHHHHHHHHHHhCCCHHHhCC Confidence 75 689999999999998865 55899999988 678999999999999999999999999999999999999998 Q ss_pred cccccccccCHHHHHHHHHHHHHHHHHHHHH-HHHhhcCc-------ceEeechhhhhcCChhhhhhhhhhcC Q lcl|Aclame:pro 304 IPNNTGGFGDVEKAAMVFARNEVKPLQDRLL-AINDWIGD-------EVVRFAPYALGGHDQPAAAPGGQRSA 368 (368) Q Consensus 304 ~~~~~~~~sn~e~~~~~f~~~tl~P~~~~ie-~l~~~l~~-------~~~~F~~~~Llr~D~~~ra~~~~~~~ 368 (368) .++ ++|+|+|++.+.|+++||.||+++|| ++|++|.+ .+++||.+.|+|+|.+++++..+..- T Consensus 302 ~~~--~~~sn~e~~~~~f~~~~l~P~~~~ie~~l~~~Ll~~~~~~~g~~i~fd~~~l~r~d~~~~~~~~~~~~ 372 (422) T protein:vir:13 302 LER--ATFNNLTEQQKDFYVTTLQSSLTVYEQEIQDKLFSQYETLQDVKAEFNVDTILRSDIKTRYEAYRIGI 372 (422) T ss_pred CCC--CCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhhCChhhhcCCceEEeechhhhcCCHHHHHHHHHHHH Confidence 754 68999999999999999999999998 48987743 25899999999999999999876654 No 40 >protein:vir:4454 Length: 414 # NCBI annotation: Portal Protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:96 # MgeName: ST64B # Cross-refs: genbank:acc:NP_700377;genbank:gi:23505449;genbank:GeneID:955656 Probab=100.00 E-value=2.5e-68 Score=391.21 Aligned_cols=343 Identities=13% Similarity=0.145 Sum_probs=267.5 Q ss_pred CCcCCCCccccccccccccccCCCcchhhccccCceEEEECC---CceeccChHHHHHHHHHHhccchhcccccHHHHHH Q lcl|Aclame:pro 1 MSRNKTRRAARAASAHVRTANTDAPTEHHTDRAAQAEVFSFG---DPVEVLDRRELLDYVECMRMGQWYEPPMPWDGLAR 77 (368) Q Consensus 1 m~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g---~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~ 77 (368) |.--++-..++.. ...+... ....... .+...+ .| .++..+...++++|+.++. .+++..|+.+ T Consensus 1 Mg~f~~lf~r~~~---~~~~~~~-~~~~~~~--~~~~~~-~g~~v~~~~al~~~~v~~~i~~Ia-~~ia~~p~~~----- 67 (414) T protein:vir:44 1 MVFFSGLFQRKSD---APVTTPA-ELADAIG--LSYDTY-TGKQISSQRAMRLTAVFSCVRVLA-ESVGMLPCNL----- 67 (414) T ss_pred CchhhhhhccCcc---Ccccchh-hHhHhhc--cCcccc-CCceechhhhhccHHHHHHHHHHH-HHhccCceEE----- Confidence 6654421111000 0000000 0111110 011111 11 1344566777888887765 5678888753 Q ss_pred HHHhcccccchhhhccc-hHHhhccCCCCcCH-HHHHHHHHhHhhhCCeeEEEEecCCcceEEEEEecccccccccCCCe Q lcl|Aclame:pro 78 SFRAAAHHSSAVYVKRN-ILVSTFIPHPLLSR-ATFERLVLDWQVFGNAYLERRENVLGGTIRLDTPLAKYVRRGLDLNT 155 (368) Q Consensus 78 ~~r~~~~~~~~~~~~~~-~~l~~~~~n~~~~~-~~~~~~~~~~ll~Gnay~~i~r~~~G~~~~L~~l~p~~v~~~~~~~~ 155 (368) ++.+. .+.....+|+ ..++..+|||+++. +||+.++.+++++||||++|+|+ .|+|++|+|++|.+|++..+.++ T Consensus 68 -~~~~~-~~~~~~~~~~~~~lL~~~PN~~~t~~~f~~~~~~~~ll~Gna~~~i~~~-~g~~~~L~~l~~~~v~~~~~~~~ 144 (414) T protein:vir:44 68 -YHLNG-SLKQRATGERLHKLISTHPNGYMTPQEFWELVVTCLCLRGNFYAYKVKA-FGEVAELLPVDPGCVVPKLNSSW 144 (414) T ss_pred -EEecC-CceeecccchHHHHHHhhcccCCCHHHHHHHHHHHHhhcCCeEEEEEeC-CCcEEEEEEEcCceEEEEECCCC Confidence 33332 2333444555 34566789998875 78889999999999999999987 59999999999999988765543 Q ss_pred ---eEEEeCCceEEEEcCccEEEecCCCCcCCccccchhhHHHHHHHHHHHHHHHHHHHHhccCCCceeEEeCCCCccHH Q lcl|Aclame:pro 156 ---YFFVQNWQQPYTFAAGSVFHLQEPDINQEVYGLPEYLSALNATWLNESATLFRRRYYKNGSHAGFILYMTDAAQKQE 232 (368) Q Consensus 156 ---~~~~~~~~~~~~~~~~dviH~r~~~~~~~~~G~spi~~a~~~i~~~~~a~~~~~~~f~ng~~p~gil~~~~~~l~~e 232 (368) |++...+|....|+++|||||+.++ .++++|+||+..++++|+++.++++|..++|+||++|+|||++++ .+++| T Consensus 145 ~~~y~~~~~~g~~~~~~~~evih~~~~~-~d~~~G~s~i~~~~~~i~~~~~~~~~~~~~f~ng~~p~gil~~~~-~l~~e 222 (414) T protein:vir:44 145 EPVYQVTFPDGSTDVLSQEDIWHVRTLT-LDGLVGLNPIAYAREAISLAAATEEHGARLFSNGAVTSGVLRTEQ-TLSDQ 222 (414) T ss_pred cEEEEEEecCceEEEEccccEEEecCCC-CCCcccccHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEeCC-CCCHH Confidence 4455567788899999999999876 478999999999999999999999999999999999999999875 68999 Q ss_pred HHHHHHHHHHHhc-cccccccccccccCccccccccccccchhhHHHHHHHHHHHHHHHHHHhCCChHHhcccccccccc Q lcl|Aclame:pro 233 DVDTLREAMKSAK-GPGNFRNLFMYAPNGKKDGIQLLPVSEVAAKDEFWNIKNVTRDDQLAAHRVPPQLMGIIPNNTGGF 311 (368) Q Consensus 233 ~~~~~k~~~~~~~-g~~n~~~~~~l~~~g~~~g~~~~pl~~~~~d~qf~e~~~~~~~~Ia~~fgVPp~~lg~~~~~~~~~ 311 (368) +.+++++.|++.+ |.+|+|+++++ +.|++|++++++++|+||+|++++++++||++|||||++||+.++ +++ T Consensus 223 ~~~~~~~~~~~~~~g~~n~~~~~vl-----~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgVpp~~l~~~~~--~t~ 295 (414) T protein:vir:44 223 AYERLKKDFEERHTGLGNAHRPMIL-----EMGLDWKSMALNAEDSQFLETRKFQLEEICRLFRVPLHMVQNTDR--ATF 295 (414) T ss_pred HHHHHHHHHHHHhcCccccCcceec-----CCCceEEEccCChHHHHHHHHHHHHHHHHHHHhCCCHHHhCCCCC--CCc Confidence 9999999998764 56899999998 578999999999999999999999999999999999999998654 689 Q ss_pred cCHHHHHHHHHHHHHHHHHHHHH-HHHhhcCcc------eEeechhhhhcCChhhhhhhhhhcC Q lcl|Aclame:pro 312 GDVEKAAMVFARNEVKPLQDRLL-AINDWIGDE------VVRFAPYALGGHDQPAAAPGGQRSA 368 (368) Q Consensus 312 sn~e~~~~~f~~~tl~P~~~~ie-~l~~~l~~~------~~~F~~~~Llr~D~~~ra~~~~~~~ 368 (368) +|+|++.+.|+++||.||++.|| ++|++|.+. +++||.++|+++|.+++++..++.- T Consensus 296 ~n~e~~~~~~~~~~l~P~~~~ie~~ln~~L~~~~~~~~~~i~fd~~~ll~~d~~~~~~~~~~~~ 359 (414) T protein:vir:44 296 NNIEELGLGFINYSLVPYLTRIEQRINTGLVRKSKQGVFYAKFNAGALLRGDMKSRFEAYATGI 359 (414) T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccccCceEEEEechhhhccCHHHHHHHHHHHH Confidence 99999999999999999999998 599887533 6899999999999999999877665 No 41 >protein:vir:98396 Length: 441 # NCBI annotation: portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:1581 # MgeName: phiPVL(108) # Cross-refs: genbank:acc:YP_918929;genbank:gi:119443691;genbank:GeneID:4594558 Probab=100.00 E-value=4.5e-68 Score=389.78 Aligned_cols=345 Identities=13% Similarity=0.163 Sum_probs=258.3 Q ss_pred CCcCCC---------Ccccc--------ccccccccccCCCc-chhhccccCceE--EEECCCceeccChHHHHHHHHHH Q lcl|Aclame:pro 1 MSRNKT---------RRAAR--------AASAHVRTANTDAP-TEHHTDRAAQAE--VFSFGDPVEVLDRRELLDYVECM 60 (368) Q Consensus 1 m~~~k~---------~~~~~--------~~~~~~~~~~~~~~-~~~~~~~~~~~~--~~~~g~p~~~~~~~~~~~~~~~~ 60 (368) |-|+.. |+..+ ..+..++....... ...........+ ....-.++..|...+|++|+.++ T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~e~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~V~acv~~I 80 (441) T protein:vir:98 1 MHWYNTDCYFVDFKSRKQSRKELVVVGIFYKNEKRDLQYNEDDLQMMVQTLPGFQGTKLRQYKDIEAIRHSDIFTAVMMI 80 (441) T ss_pred CceecCccceeccccccchhhhhhccccccccccccccCCCcchHHHHHHhhcccccCccccchhhhhccHHHHHHHHHH Confidence 332211 11111 11222222211111 111111110000 00011234456667777887766 Q ss_pred hccchhcccccHHHHHHHHHhcccccchhhhccc-hHHhhccCCCCcCH-HHHHHHHHhHhhhCCeeEEEEecCCcceEE Q lcl|Aclame:pro 61 RMGQWYEPPMPWDGLARSFRAAAHHSSAVYVKRN-ILVSTFIPHPLLSR-ATFERLVLDWQVFGNAYLERRENVLGGTIR 138 (368) Q Consensus 61 ~~~~~~~~p~~~~~l~~~~r~~~~~~~~~~~~~~-~~l~~~~~n~~~~~-~~~~~~~~~~ll~Gnay~~i~r~~~G~~~~ 138 (368) . .+++..|+.+. + .+ .+..+|+ ..++...|||+++. +||+.++.+++++||||++|+|+..|+|++ T Consensus 81 a-~~iA~lpl~~~------~----~~-~~~~~~~~~~lL~~~PN~~~t~~~f~~~l~~~lll~Gnay~~i~r~~~G~~~~ 148 (441) T protein:vir:98 81 A-SDLARMPIRVT------V----NG-QINYSDRIVNLLNTRPNPMYNGYIFKLVVFVSALLTSHGYIEITRDKTGEPMN 148 (441) T ss_pred H-HhhccCceEEe------c----CC-cccccchHHHHHhcccccCCCHHHHHHHHHHHHhhcCCeEEEEEEcCCCcEEE Confidence 5 56888887542 2 12 2233454 44566789998875 788999999999999999999999999999 Q ss_pred EEEecccccccccCCCe--eEEEe-----CCceEEEEcCccEEEecCCCCcCCccccchhhHHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 139 LDTPLAKYVRRGLDLNT--YFFVQ-----NWQQPYTFAAGSVFHLQEPDINQEVYGLPEYLSALNATWLNESATLFRRRY 211 (368) Q Consensus 139 L~~l~p~~v~~~~~~~~--~~~~~-----~~~~~~~~~~~dviH~r~~~~~~~~~G~spi~~a~~~i~~~~~a~~~~~~~ 211 (368) |+|++|+.|++..+.++ +|++. ..+....++++||||||.++ .++++|+||+.+++++|+++.++++|..++ T Consensus 149 L~~i~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~~~~dviHir~~~-~dg~~G~spi~~~~~~i~~~~a~~~~~~~~ 227 (441) T protein:vir:98 149 LTFRKTSEIELKLDARGRLYYFHQRIDSNGNNIERNVKFEDMLDIKFYS-LDGINGLSLLDTLSRTIESDNNGKDFLNNF 227 (441) T ss_pred EEEEcCceeEEEECCCCcEEEEEEEeccCcceeeEEEccccEEEeccCC-CCCccccCHHHHHHHHHHHHHHHHHHHHHH Confidence 99999999998776553 33332 23346789999999999876 578999999999999999999999999999 Q ss_pred HhccCCCceeEEeCCCCccHHHHHHHHHHHHHhc-cccccccccccccCccccccccccccchhhHHHHHHHHHHHHHHH Q lcl|Aclame:pro 212 YKNGSHAGFILYMTDAAQKQEDVDTLREAMKSAK-GPGNFRNLFMYAPNGKKDGIQLLPVSEVAAKDEFWNIKNVTRDDQ 290 (368) Q Consensus 212 f~ng~~p~gil~~~~~~l~~e~~~~~k~~~~~~~-g~~n~~~~~~l~~~g~~~g~~~~pl~~~~~d~qf~e~~~~~~~~I 290 (368) |+||++|+|||++++...++++++++++.|++.+ |.+|+|++++| +.|++|+|++++++|+||+|++++++++| T Consensus 228 f~ng~~~~gil~~~~~~~~~e~~~~~~~~~~~~~~G~~nag~~~vl-----~~g~~~~~l~~~~~d~q~~e~r~~~~~~I 302 (441) T protein:vir:98 228 LRNGTHAGGILKMKGVLDNKKARDRAREEFHKSFSGTKQAGKVVVL-----DESMTFDQLEVDTEVLKLIRENKSSTREI 302 (441) T ss_pred HhccCCCcEEEEeCCCCCCHHHHHHHHHHHHHHhcCccccCcceec-----CCCceEEEccCChhHHHHHHHHHHhHHHH Confidence 9999999999999876567899999999998765 56899999988 67899999999999999999999999999 Q ss_pred HHHhCCChHHhcccccccccccCHHHHHHHHHHHHHHHHHHHHH-HHHhhcCcc----eEeechhhhhcCChhhhhhhhh Q lcl|Aclame:pro 291 LAAHRVPPQLMGIIPNNTGGFGDVEKAAMVFARNEVKPLQDRLL-AINDWIGDE----VVRFAPYALGGHDQPAAAPGGQ 365 (368) Q Consensus 291 a~~fgVPp~~lg~~~~~~~~~sn~e~~~~~f~~~tl~P~~~~ie-~l~~~l~~~----~~~F~~~~Llr~D~~~ra~~~~ 365 (368) |++|||||++||... +.++.+|+...|+ +||.||+++|| +||++|.+. +++||.++|+|+|.++|++..+ T Consensus 303 a~~fgVPp~~lg~~~----~~~s~~q~~~~y~-~tl~P~~~~ie~~ln~~L~~~~~~~~~~fd~~~llr~d~~~~~~~~~ 377 (441) T protein:vir:98 303 AGVFGIPLHKFGIET----ANMSITDANLDYL-STLKPYITCVCAELNFKFNDEYVNREFKFDTTEIRVVDEKTQAEIDK 377 (441) T ss_pred HHHhCCCHHHcCCCC----CCccHHHHHHHHH-HHHHHHHHHHHHHHHhhccccccCceEEEechhhhccCHHHHHHHHH Confidence 999999999998632 2246788887776 59999999998 599988653 6899999999999999999877 Q ss_pred hcC Q lcl|Aclame:pro 366 RSA 368 (368) Q Consensus 366 ~~~ 368 (368) ... T Consensus 378 ~~~ 380 (441) T protein:vir:98 378 INI 380 (441) T ss_pred HHH Confidence 654 No 42 >protein:vir:4194 Length: 540 # NCBI annotation: putative portal protein # Family: family:all:1379 # ACLAME annotation(s): phi:0000161 - phage head/capsid # MgeID: mge:88 # MgeName: psiM100 # Cross-refs: genbank:acc:NP_071819;genbank:gi:11863102;genbank:GeneID:1257604 Probab=100.00 E-value=2e-68 Score=391.74 Aligned_cols=331 Identities=18% Similarity=0.209 Sum_probs=257.2 Q ss_pred EEECCCceeccChHH-HH-----HHHHHHhccchhcccccHHHHHHHHHhcccccchhhhccc-------------hHHh Q lcl|Aclame:pro 38 VFSFGDPVEVLDRRE-LL-----DYVECMRMGQWYEPPMPWDGLARSFRAAAHHSSAVYVKRN-------------ILVS 98 (368) Q Consensus 38 ~~~~g~p~~~~~~~~-~~-----~~~~~~~~~~~~~~p~~~~~l~~~~r~~~~~~~~~~~~~~-------------~~l~ 98 (368) +|+++...+.+.... +. ..+..-+.+.|+.+|+++..|+.+.+.++.+.+|+....+ ..+. T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pp~~~~~La~~~~~n~~v~scI~~ia~~ia~~~~~i~~~~~~~~ 80 (540) T protein:vir:41 1 MFNYHLSIKSLEKYRAIKGDTDSQALKEDRFEEYVEPKVHPLVLLSLLQVNPYHASACSIKANDILRTGYLIDGDDGGVE 80 (540) T ss_pred CCCcccChhhccchhhhhccccccccccCCCCccccCCCCHHHHHHHHHhcHHHHHHHHHHHHHHhcCCceEecCccchh Confidence 333333222222110 00 0111112245667777777777776666666666543322 2244 Q ss_pred hccCCCCcCH-HHHHHHHHhHhhhCCeeEEEEecCCcceEEEEEecccccccccCCCeeEEEeCC--------------- Q lcl|Aclame:pro 99 TFIPHPLLSR-ATFERLVLDWQVFGNAYLERRENVLGGTIRLDTPLAKYVRRGLDLNTYFFVQNW--------------- 162 (368) Q Consensus 99 ~~~~n~~~~~-~~~~~~~~~~ll~Gnay~~i~r~~~G~~~~L~~l~p~~v~~~~~~~~~~~~~~~--------------- 162 (368) .+.||++++. +|++.++.+++++||||++++|+..|+|++|+|++|.+|++..++++|++...+ T Consensus 81 ~~lpN~~~t~~~f~~~~v~dlll~Gnayv~i~r~~~G~~~~L~~i~~~~V~v~~~~~~~~~~~d~~~~~~~~~~~~~~~~ 160 (540) T protein:vir:41 81 ELLRACRPSFEFILLQALEDLQVFNYCTLEVVRDDQGEPVRLDYIPAHTVRVHRDGSRYMQTWDGIHVTYFKDYRYEGEV 160 (540) T ss_pred hhccCCCCCHHHHHHHHHHHHHhcCCeEEEEEECCCCcEEEEEEeCCcceEEeEcCceeEeeecCceeeeeeccccccee Confidence 5678998775 788899999999999999999999999999999999999998877765543322 Q ss_pred -----ceEEEEcCccEEEecCCCCcCCccccchhhHHHHHHHHHHHHHHHHHHHHhccCCCceeEEeCCCCccH------ Q lcl|Aclame:pro 163 -----QQPYTFAAGSVFHLQEPDINQEVYGLPEYLSALNATWLNESATLFRRRYYKNGSHAGFILYMTDAAQKQ------ 231 (368) Q Consensus 163 -----~~~~~~~~~dviH~r~~~~~~~~~G~spi~~a~~~i~~~~~a~~~~~~~f~ng~~p~gil~~~~~~l~~------ 231 (368) .....++++||||||.+++.+++||+||+.+++.+|.++.++++|+.++|+||++|+|||++++...++ T Consensus 161 ~~~~g~~~~~~~~~eViHir~~~~~~~~~G~Spi~~~~~~i~~~~~~~~~~~~~f~Ng~~p~giL~~~g~l~~e~~~~~~ 240 (540) T protein:vir:41 161 NPDNGEDQDGVGANEIIFIHLPSPICSYYGVPRYLSAAPSILAMQKIDEYNYAFFDNYTIPSYVITVTGEFEDEMELGSD 240 (540) T ss_pred eccccccceeecccceEEecCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEeCcccCchhccchH Confidence 223568899999999999889999999999999999999999999999999999999999987643222 Q ss_pred ---HHHHHHHHHHHHhc-c-ccccccccccc-cCccccccccccccchhhHHHHHHHHHHHHHHHHHHhCCChHHhcccc Q lcl|Aclame:pro 232 ---EDVDTLREAMKSAK-G-PGNFRNLFMYA-PNGKKDGIQLLPVSEVAAKDEFWNIKNVTRDDQLAAHRVPPQLMGIIP 305 (368) Q Consensus 232 ---e~~~~~k~~~~~~~-g-~~n~~~~~~l~-~~g~~~g~~~~pl~~~~~d~qf~e~~~~~~~~Ia~~fgVPp~~lg~~~ 305 (368) +.++++++.|++.+ | .+|+|++++|. +++.++|++|+|++++++|+||+|++++++++||++|||||++||+.+ T Consensus 241 ~~~~~~~~~~~~~~~~~~g~~~nag~~~vLe~~~~~~~g~~~~pl~~~~~d~qfle~~~~~~~eIa~afgVPp~~lG~~~ 320 (540) T protein:vir:41 241 GEPTGRTVLQGLIEDNFKYLKEAPHTPLVFSIPGGDTVEVTFTPLNTSQKELSFREYAAEKKHDIAAAHMIDPYRLGITD 320 (540) T ss_pred HHHHHHHHHHHHHHHHhccccccccceEEEecCCCcccceeEEecccchhHHHHHHHHHHHHHHHHHHhCCCHHHcCccc Confidence 23466777776643 4 36999999885 444567999999999999999999999999999999999999999988 Q ss_pred cccccccCHHHHHHHHHHHHHHHHHHHHHH-HHhhcCcc-----eEeechhhhhcCChhhhhhhhhhcC Q lcl|Aclame:pro 306 NNTGGFGDVEKAAMVFARNEVKPLQDRLLA-INDWIGDE-----VVRFAPYALGGHDQPAAAPGGQRSA 368 (368) Q Consensus 306 ~~~~~~sn~e~~~~~f~~~tl~P~~~~ie~-l~~~l~~~-----~~~F~~~~Llr~D~~~ra~~~~~~~ 368 (368) +++.+++|+|++.+.|+++||.|+++.||+ ||++|.+. +|+||...|+++|.+++.+..-+.. T Consensus 321 ~~~~n~sn~eq~~~~f~~~tL~P~~~~ie~~ln~~L~~~~~~~~~i~f~~~~ll~~D~~~~~~~lv~~G 389 (540) T protein:vir:41 321 VGPLGGNFAEVARRTYYESVVRPQQEIVSSVLTDFIQLKLDPGARFVFNEEILMESEFVHNYALLVQCG 389 (540) T ss_pred CCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCceEEEecchhhcchHHHHHHHHHHhCC Confidence 777889999999999999999999999995 88887433 5899999999999988866554443 No 43 >protein:vir:1431 Length: 419 # NCBI annotation: putative portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:30 # MgeName: phiE125 # Cross-refs: genbank:acc:NP_536360;genbank:gi:17975165;genbank:GeneID:929165 Probab=100.00 E-value=3.6e-68 Score=390.32 Aligned_cols=344 Identities=13% Similarity=0.123 Sum_probs=265.3 Q ss_pred CCcCCCCccccccccccccccCCCcchhhcccc--CceEEEECCCceeccChHHHHHHHHHHhccchhcccccHHHHHHH Q lcl|Aclame:pro 1 MSRNKTRRAARAASAHVRTANTDAPTEHHTDRA--AQAEVFSFGDPVEVLDRRELLDYVECMRMGQWYEPPMPWDGLARS 78 (368) Q Consensus 1 m~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~ 78 (368) |=.+|..... .. ....++. .......+.. .+...+ .+..++...+|+.|+.++. ..++..|+.+ T Consensus 1 ~~~~r~~~~~--~~-~~~~~~~-~~~~~~~g~~~s~~~~~v---t~~~al~~~~v~~~v~~ia-~~iA~lp~~~------ 66 (419) T protein:vir:14 1 MFFSRQLLSN--LG-QTQMSAG-GWVSALLGSSRSDSGQVV---TPASALALTVLQNCVTLLA-ESIAQLPIEL------ 66 (419) T ss_pred Cccccccccc--cc-ccccCcc-hhhHHhhcCCCccCCccc---chHHhhccHHHHHHHHHHH-HhhccCceEE------ Confidence 6544432211 00 0111111 1111121111 111112 1344566677777777654 5688888753 Q ss_pred HHhcccccchhhhccchH-HhhccCCCCcCH-HHHHHHHHhHhhhCCeeEEEEecCCcceEEEEEecccccccccCCCee Q lcl|Aclame:pro 79 FRAAAHHSSAVYVKRNIL-VSTFIPHPLLSR-ATFERLVLDWQVFGNAYLERRENVLGGTIRLDTPLAKYVRRGLDLNTY 156 (368) Q Consensus 79 ~r~~~~~~~~~~~~~~~~-l~~~~~n~~~~~-~~~~~~~~~~ll~Gnay~~i~r~~~G~~~~L~~l~p~~v~~~~~~~~~ 156 (368) ++... .++....+|+.. ++...|||+++. +||+.++.+++++||+|++|.|+..|+|++|||++|.+|++..+.++. T Consensus 67 ~~~~~-~~~~~~~~~~l~~lL~~~PN~~~t~~~f~~~~~~~l~l~Gna~~~i~r~~~G~~~~l~pl~~~~v~v~~~~~~~ 145 (419) T protein:vir:14 67 YERSG-EDRKPATDHPLYSILKYEPNSWQTPFEYQEQSQVAVGLRGNSYSFIDRDSDGVIQGLYPLDNEAVTVMRGSDLK 145 (419) T ss_pred EEecC-CccccccccHHHHHHHhhcccCCCHHHHHHHHHHHHhhcCCeEEEEEECCCCcEEEEEEecCceEEEEECCCce Confidence 33333 234455566644 455689998775 788899999999999999999999999999999999999998777654 Q ss_pred EEEeCCceEEEEcCccEEEecCCCCcCCccccchhhHHHHHHHHHHHHHHHHHHHHhccCCCceeEEeCCC---CccHHH Q lcl|Aclame:pro 157 FFVQNWQQPYTFAAGSVFHLQEPDINQEVYGLPEYLSALNATWLNESATLFRRRYYKNGSHAGFILYMTDA---AQKQED 233 (368) Q Consensus 157 ~~~~~~~~~~~~~~~dviH~r~~~~~~~~~G~spi~~a~~~i~~~~~a~~~~~~~f~ng~~p~gil~~~~~---~l~~e~ 233 (368) +.+...+. ..++.++|+|++.++ .++++|+||+.+++++|+.+.++++|..++|+||++|+|||++++. .+++++ T Consensus 146 ~~y~~~~~-~~~~~~~i~h~~~~~-~dg~~G~s~i~~~~~~i~~~~~~~~~~~~~f~ng~~p~gil~~~~~~~~~~~~~~ 223 (419) T protein:vir:14 146 PVYRVRGS-DPMPQRLVHHVRWMS-INGYTGLSPVLLHANAIGHAQAIQQYAGKSFMNGTALSGVIERPKDAPALKDQAS 223 (419) T ss_pred EEEEEccC-cccchhheeEecCcC-CCCcccccHHHHHHHHHHHHHHHHHHHHHHHhccCCccEEEEecCCCCcccCHHH Confidence 33332222 247889999999876 4799999999999999999999999999999999999999998753 346899 Q ss_pred HHHHHHHHHHhc-cccccccccccccCccccccccccccchhhHHHHHHHHHHHHHHHHHHhCCChHHhccccccccccc Q lcl|Aclame:pro 234 VDTLREAMKSAK-GPGNFRNLFMYAPNGKKDGIQLLPVSEVAAKDEFWNIKNVTRDDQLAAHRVPPQLMGIIPNNTGGFG 312 (368) Q Consensus 234 ~~~~k~~~~~~~-g~~n~~~~~~l~~~g~~~g~~~~pl~~~~~d~qf~e~~~~~~~~Ia~~fgVPp~~lg~~~~~~~~~s 312 (368) ++++++.|++.+ |.+|+|+++++ +.|++|+|++++++|+||+|++++++++||++|||||++||..++ ++++ T Consensus 224 ~~~~~~~~~~~~~g~~nag~~~vl-----~~g~~~~~l~~~~~d~q~~e~~~~~~~~Ia~~fgVpp~~lg~~~~--~t~s 296 (419) T protein:vir:14 224 VDRITDGWNAKFGGSGNAKKVALL-----QEGMTFRPLSMTNVDAALIDALRLSALDIARIYKIPAHMVNELER--ATFS 296 (419) T ss_pred HHHHHHHHHHHhcCccccCCceec-----CCCceEEEccCChhhHHHHHHHHHHHHHHHHHhCCCHHHhcCCCC--CCcc Confidence 999999998764 56899999998 678999999999999999999999999999999999999998654 6899 Q ss_pred CHHHHHHHHHHHHHHHHHHHHH-HHHhhcCc------ceEeechhhhhcCChhhhhhhhhhcC Q lcl|Aclame:pro 313 DVEKAAMVFARNEVKPLQDRLL-AINDWIGD------EVVRFAPYALGGHDQPAAAPGGQRSA 368 (368) Q Consensus 313 n~e~~~~~f~~~tl~P~~~~ie-~l~~~l~~------~~~~F~~~~Llr~D~~~ra~~~~~~~ 368 (368) |+|++.+.|+++||.||++.|| ++|++|.. .+++||.++|+|+|.++|++..++.- T Consensus 297 ~~E~~~~~f~~~~L~P~~~~ie~~l~~kll~~~~~~~~~i~fd~~~l~r~d~~~~~~~~~~~~ 359 (419) T protein:vir:14 297 NIEHQSLQFVIYTLLPWVKRHEQAKTRDLLLPSERKQYFIEYNLAGLLRGDQSSRYAAYAVGR 359 (419) T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHhhhccCccccCCeEEEEechhhhccCHHHHHHHHHHHH Confidence 9999999999999999999998 59987743 25899999999999999999887754 No 44 >protein:vir:80333 Length: 419 # NCBI annotation: gp4, phage portal protein, HK97 family # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:1881 # MgeName: phi644-2 # Cross-refs: genbank:acc:YP_001111083;genbank:gi:134288632;genbank:GeneID:4960580 Probab=100.00 E-value=5.2e-68 Score=389.46 Aligned_cols=344 Identities=14% Similarity=0.130 Sum_probs=268.2 Q ss_pred CCcCCCCccccccccccccccCCCcchhhccccCc--eEEEECCCceeccChHHHHHHHHHHhccchhcccccHHHHHHH Q lcl|Aclame:pro 1 MSRNKTRRAARAASAHVRTANTDAPTEHHTDRAAQ--AEVFSFGDPVEVLDRRELLDYVECMRMGQWYEPPMPWDGLARS 78 (368) Q Consensus 1 m~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~ 78 (368) |-.+|.+... . .. ..+...+......+...+ ...+ .+..++...+|+.|+.++. .+++..|+. + T Consensus 1 m~~~~~~~~~-~-~~--~~~~~~~~~~~~~g~~~s~~~~~v---~~~~al~~~~v~~cv~~ia-~~ia~lp~~------~ 66 (419) T protein:vir:80 1 MFFSRQLLSN-L-GQ--TQPGSGGWVSALLGSARSEAGQVV---TPASALSLTVLQNCVTLLA-ESIAQLPVE------L 66 (419) T ss_pred CCcccccccc-c-Cc--CCCCcchhhHHhhcccccccCccc---ChHHhhccHHHHHHHHHHH-HhhccCceE------E Confidence 8765542221 1 10 001111111122211111 1111 2445666777777777765 568888875 3 Q ss_pred HHhcccccchhhhccch-HHhhccCCCCcCH-HHHHHHHHhHhhhCCeeEEEEecCCcceEEEEEecccccccccCCCee Q lcl|Aclame:pro 79 FRAAAHHSSAVYVKRNI-LVSTFIPHPLLSR-ATFERLVLDWQVFGNAYLERRENVLGGTIRLDTPLAKYVRRGLDLNTY 156 (368) Q Consensus 79 ~r~~~~~~~~~~~~~~~-~l~~~~~n~~~~~-~~~~~~~~~~ll~Gnay~~i~r~~~G~~~~L~~l~p~~v~~~~~~~~~ 156 (368) ++.... +.....+|+. .++..+|||+++. +|++.++.+++++||||++|.|+..|+|++|+|++|..|++..+.++. T Consensus 67 ~~~~~~-~~~~~~~~~l~~lL~~~PN~~~t~~~f~~~~~~~l~l~Gna~~~i~r~~~G~~~~L~~i~~~~v~i~~~~~~~ 145 (419) T protein:vir:80 67 YERSGD-DRKPATDHPLYSILKYEPNPWQTPFEYQEQSQVAVGLRGNSYSFIDRDQDGVIQGLYPLDNEAVTVMKGPDLK 145 (419) T ss_pred EEecCC-CcccccccHHHHHHHhhcccCCCHHHHHHHHHHHHhhcCCeEEEEEECCCCcEEEEEEecCceEEEEECCCce Confidence 344433 3444556664 3556789998765 788999999999999999999999999999999999999998887764 Q ss_pred EEEeCCceEEEEcCccEEEecCCCCcCCccccchhhHHHHHHHHHHHHHHHHHHHHhccCCCceeEEeCC---CCccHHH Q lcl|Aclame:pro 157 FFVQNWQQPYTFAAGSVFHLQEPDINQEVYGLPEYLSALNATWLNESATLFRRRYYKNGSHAGFILYMTD---AAQKQED 233 (368) Q Consensus 157 ~~~~~~~~~~~~~~~dviH~r~~~~~~~~~G~spi~~a~~~i~~~~~a~~~~~~~f~ng~~p~gil~~~~---~~l~~e~ 233 (368) +.+...+. ..+++++|+|++.++ .++++|+||+.+++++|+++.++++|..++|+||++|+|||++++ ...++++ T Consensus 146 ~~y~~~~~-~~~~~~~i~h~~~~~-~d~~~G~s~i~~~~~~i~~~~~~~~~~~~~f~ng~~~~gil~~~~~~~~~~~~~~ 223 (419) T protein:vir:80 146 PMYRVAGA-DPLPQRLVHHVRWMS-INGYTGLSPVLLHANAIGHAQAIQQYAGKSFMNGTALSGVIERPTDAPALKDQAS 223 (419) T ss_pred EEEEEcCc-cccchhheEEecCCC-CCCcccccHHHHHHHHHHHHHHHHHHHHHHHhcCCCccEEEEecCCCCcccCHHH Confidence 44433332 358899999999876 478999999999999999999999999999999999999999864 3457899 Q ss_pred HHHHHHHHHHhc-cccccccccccccCccccccccccccchhhHHHHHHHHHHHHHHHHHHhCCChHHhccccccccccc Q lcl|Aclame:pro 234 VDTLREAMKSAK-GPGNFRNLFMYAPNGKKDGIQLLPVSEVAAKDEFWNIKNVTRDDQLAAHRVPPQLMGIIPNNTGGFG 312 (368) Q Consensus 234 ~~~~k~~~~~~~-g~~n~~~~~~l~~~g~~~g~~~~pl~~~~~d~qf~e~~~~~~~~Ia~~fgVPp~~lg~~~~~~~~~s 312 (368) .+++++.|++.+ |..|+|+++++ +.|++|+|++++++|+||+|++++++++||++|||||++||+.++ +|++ T Consensus 224 ~~~~~~~~~~~~~g~~n~g~~~vl-----~~g~~~~~l~~s~~d~q~~e~~~~~~~~Ia~~fgVPp~llg~~~~--~t~~ 296 (419) T protein:vir:80 224 VDRITDGWNAKFGGSGNAKKVALL-----QEGMKFKPLSMTNVDAALIDALRLSALDIARIYKIPAHMVNELER--ATFS 296 (419) T ss_pred HHHHHHHHHHHhcCccccCCceec-----CCCceEEeccCChhhHHHHHHHHHHHHHHHHHhCCCHHHhcCCCC--CCcc Confidence 999999998765 56899999998 678999999999999999999999999999999999999998654 6899 Q ss_pred CHHHHHHHHHHHHHHHHHHHHH-HHHhhcCc------ceEeechhhhhcCChhhhhhhhhhcC Q lcl|Aclame:pro 313 DVEKAAMVFARNEVKPLQDRLL-AINDWIGD------EVVRFAPYALGGHDQPAAAPGGQRSA 368 (368) Q Consensus 313 n~e~~~~~f~~~tl~P~~~~ie-~l~~~l~~------~~~~F~~~~Llr~D~~~ra~~~~~~~ 368 (368) |+|++.+.|+++||.||++.|| ++|++|.. .+++||.+.|+++|.++|++..++.- T Consensus 297 n~e~~~~~f~~~~l~P~~~~ie~~l~~kll~~~~~~~~~i~fd~~~l~~~d~~~~~~~~~~~~ 359 (419) T protein:vir:80 297 NIEHQSLQFVIYTLLPWVKRHEQAKTRDLLLPSERKQYFIEYNLAGLLRGDQSSRYAAYAVGR 359 (419) T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHhhhccCccccCCeEEEEechhhhccCHHHHHHHHHHHH Confidence 9999999999999999999998 58887643 26899999999999999999877754 No 45 >protein:vir:81152 Length: 411 # NCBI annotation: putative portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:1892 # MgeName: Geobacillus virus E2 # Cross-refs: genbank:acc:YP_001285809;genbank:gi:148747730;genbank:GeneID:5247195 Probab=100.00 E-value=3e-68 Score=390.76 Aligned_cols=343 Identities=14% Similarity=0.139 Sum_probs=266.5 Q ss_pred CCcCCCCccccccccccccccCCCcchhhccccCceEEEECCCceeccChHHHHHHHHHHhccchhcccccHHHHHHHHH Q lcl|Aclame:pro 1 MSRNKTRRAARAASAHVRTANTDAPTEHHTDRAAQAEVFSFGDPVEVLDRRELLDYVECMRMGQWYEPPMPWDGLARSFR 80 (368) Q Consensus 1 m~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~r 80 (368) |...++.+ +...+. ........ . ..........+ .++..+...+|+.|+.++. ..++..|+.+ ++ T Consensus 1 MG~~~~~~-~~~~~~-~~~~~~~~--~-~~~~~~g~~~~---~~~~al~~~~V~~~v~~Ia-~~iA~lp~~~------~~ 65 (411) T protein:vir:81 1 MGWWSRLT-RFFRPR-NETVDMTN--P-LLLQWLGVDPD---TPRNQLSEATYFACLKILS-ESLGKLPLKM------YQ 65 (411) T ss_pred CchHHHHH-hhccCc-ccccccch--H-HHHHHhcCccc---ChhhhhccHHHHHHHHHHH-HhHhhCceeE------EE Confidence 77553211 111110 01111111 0 11100011111 1344555667777777654 5688888753 34 Q ss_pred hcccccchhhhccch-HHhhccCCCCcCH-HHHHHHHHhHhhhCCeeEEEEecCCcceEEEEEecccccccccCCCe--- Q lcl|Aclame:pro 81 AAAHHSSAVYVKRNI-LVSTFIPHPLLSR-ATFERLVLDWQVFGNAYLERRENVLGGTIRLDTPLAKYVRRGLDLNT--- 155 (368) Q Consensus 81 ~~~~~~~~~~~~~~~-~l~~~~~n~~~~~-~~~~~~~~~~ll~Gnay~~i~r~~~G~~~~L~~l~p~~v~~~~~~~~--- 155 (368) ....+ .....+|+. .++...|||+++. +|++.++.+++++||||++|+|+ .|++.+|+|++|+.|++..+..+ T Consensus 66 ~~~~~-~~~~~~~~l~~lL~~~PN~~~t~~~f~~~l~~~lll~Gna~~~i~r~-~g~~~~l~~l~~~~v~~~~~~~~~~~ 143 (411) T protein:vir:81 66 KTERG-IVKSDREELYNLLKLRPNPYMTSSVFWSTVEMNRNHYGNAYVWCQYS-GPQLQALWILPSQYVTIVVDDRGLLG 143 (411) T ss_pred ecCCc-eeeecccHHHHHHhhccCCCCCHHHHHHHHHHHHhhcCCeEEEEEec-CCceEEEEEECCceEEEEEcCccccc Confidence 43333 333445663 3556689998875 78889999999999999999998 59999999999999998776432 Q ss_pred -----eEEEe--CCceEEEEcCccEEEecCCCCcCCccccchhhHHHHHHHHHHHHHHHHHHHHhccCCCceeEEeCCCC Q lcl|Aclame:pro 156 -----YFFVQ--NWQQPYTFAAGSVFHLQEPDINQEVYGLPEYLSALNATWLNESATLFRRRYYKNGSHAGFILYMTDAA 228 (368) Q Consensus 156 -----~~~~~--~~~~~~~~~~~dviH~r~~~~~~~~~G~spi~~a~~~i~~~~~a~~~~~~~f~ng~~p~gil~~~~~~ 228 (368) +|.+. .+|....|+++||||||.+.+.++++|+||+.+++.+|.++.++++|..++|+||++|+|||++++ . T Consensus 144 ~~~~~~~~~~~~~~g~~~~~~~~eiih~k~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~f~ng~~p~gil~~~~-~ 222 (411) T protein:vir:81 144 EKNAIWYRYNDPYDGKMYVFRNDEILHFKTSVTFDGITGLSVRDVLKHTVDGALESQKFMNNLYKTGLTGKAVLEYTG-D 222 (411) T ss_pred ccceEEEEEEecCCceEEEEccccEEEEcCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEeCC-C Confidence 33333 467788899999999997666789999999999999999999999999999999999999999875 6 Q ss_pred ccHHHHHHHHHHHHHhc-cccccccccccccCccccccccccccchhhHHHHHHHHHHHHHHHHHHhCCChHHhcccccc Q lcl|Aclame:pro 229 QKQEDVDTLREAMKSAK-GPGNFRNLFMYAPNGKKDGIQLLPVSEVAAKDEFWNIKNVTRDDQLAAHRVPPQLMGIIPNN 307 (368) Q Consensus 229 l~~e~~~~~k~~~~~~~-g~~n~~~~~~l~~~g~~~g~~~~pl~~~~~d~qf~e~~~~~~~~Ia~~fgVPp~~lg~~~~~ 307 (368) +++|+++++++.|++.+ |.+|+|+++++ ++|++|+|++++++|+||+|++++++++||++|||||++||+.++ T Consensus 223 l~~e~~~~~~~~~~~~~~g~~n~g~~~vl-----~~g~~~~~l~~~~~d~q~~e~~~~~~~~Ia~~fgVPp~~lg~~~~- 296 (411) T protein:vir:81 223 LNQEARDRLVKGFEQFANGSKNAGKIIPV-----PLGMKLVPLDIKLTDSQFFELKKYTALQIAAAFGIKPNQINDYEK- 296 (411) T ss_pred CCHHHHHHHHHHHHHHhcCccccCCceec-----CCCceEEEccCCHHHHHHHHHHHHHHHHHHHHhCCCHHHhCCCCC- Confidence 89999999999998865 56899999888 678999999999999999999999999999999999999998765 Q ss_pred cccccCHHHHHHHHHHHHHHHHHHHHHH-HHhhcCc-------ceEeechhhhhcCChhhhhhhhhhcC Q lcl|Aclame:pro 308 TGGFGDVEKAAMVFARNEVKPLQDRLLA-INDWIGD-------EVVRFAPYALGGHDQPAAAPGGQRSA 368 (368) Q Consensus 308 ~~~~sn~e~~~~~f~~~tl~P~~~~ie~-l~~~l~~-------~~~~F~~~~Llr~D~~~ra~~~~~~~ 368 (368) ++|+|+|++.+.|+++||.||++.||+ +|++|.+ .+++||.++|+++|.+++++..+..- T Consensus 297 -~t~~n~e~~~~~f~~~~l~P~~~~ie~~l~~~ll~~~~~~~~~~~~fd~~~ll~~d~~~~~~~~~~~~ 364 (411) T protein:vir:81 297 -SSYASAEAQNLAFYVDTLLYVLKQYEEEITYKILSNDLISQGHYFKFNVNVILRADIKTQMDSLSTAV 364 (411) T ss_pred -CCchhHHHHHHHHHHHHHHHHHHHHHHHHHhhcCChhhcCCCcEEEeechhhhccCHHHHHHHHHHHH Confidence 689999999999999999999999984 8887642 25899999999999999999877665 No 46 >protein:vir:102118 Length: 409 # NCBI annotation: phage portal protein, HK97 family # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:1641 # MgeName: phiSM101 # Cross-refs: genbank:acc:YP_699943;genbank:gi:110804051;genbank:GeneID:4206661 Probab=100.00 E-value=1.2e-67 Score=387.41 Aligned_cols=342 Identities=12% Similarity=0.136 Sum_probs=267.3 Q ss_pred CCcCCCCccccccccccccccCCCcchhhccccCceEEEECCCceeccChHHHHHHHHHHhccchhcccccHHHHHHHHH Q lcl|Aclame:pro 1 MSRNKTRRAARAASAHVRTANTDAPTEHHTDRAAQAEVFSFGDPVEVLDRRELLDYVECMRMGQWYEPPMPWDGLARSFR 80 (368) Q Consensus 1 m~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~r 80 (368) |==+|.++.+ ....+..+...........+...+ .+..++...+++.|+.++. ..++..|+.++ + T Consensus 1 m~f~~~~~~~-----~~~~~~~~~~~~~~~g~~~~~~~v---~~~~al~~~~v~~~i~~ia-~~ia~lp~~~~------~ 65 (409) T protein:vir:10 1 MLFRKGFKNQ-----SQEISIDDKKILEWLGINPSETYV---NGKSCLKQATVFGCIRILS-DNISKLPIKIY------Q 65 (409) T ss_pred CcccccccCc-----CCCCCCChHHHHHHhcCCcCccee---chhhhhccHHHHHHHHHHH-HhhhhCceEEE------E Confidence 4322222111 000011111111121212222222 2345677777888887664 56788887542 2 Q ss_pred hcccccchhhhccch-HHhhccCCCCcCH-HHHHHHHHhHhhhCCeeEEEEecCCcceEEEEEecccccccccCCCe--- Q lcl|Aclame:pro 81 AAAHHSSAVYVKRNI-LVSTFIPHPLLSR-ATFERLVLDWQVFGNAYLERRENVLGGTIRLDTPLAKYVRRGLDLNT--- 155 (368) Q Consensus 81 ~~~~~~~~~~~~~~~-~l~~~~~n~~~~~-~~~~~~~~~~ll~Gnay~~i~r~~~G~~~~L~~l~p~~v~~~~~~~~--- 155 (368) .. .+.....+|+. .++...||++++. +||+.++.+++++||||++++|+..|++++|+|++|.+|++..+.++ T Consensus 66 ~~--~~~~~~~~~~l~~lL~~~PN~~~t~~~f~~~~~~~lll~Gna~~~i~r~~~G~~~~L~~i~~~~V~v~~~~~~~~~ 143 (409) T protein:vir:10 66 KK--DGIKRVPDHYLEYLLKLRPNPYMSSSDFWKCIEVQRNIYGNAYVALDFKKNGEIKGLYPLKSDGMKIFVDDTGLLN 143 (409) T ss_pred ec--CCeeeccCchHHHHHhhccCCCCCHHHHHHHHHHHHhhcCCeEEEEEEcCCCcEEEEEEEcCCceEEEEcCCcccc Confidence 21 22333445654 3455789998875 78889999999999999999999999999999999999998765432 Q ss_pred ------eEEEeCCceEEEEcCccEEEecCCCCcCCccccchhhHHHHHHHHHHHHHHHHHHHHhccCCCceeEEeCCCCc Q lcl|Aclame:pro 156 ------YFFVQNWQQPYTFAAGSVFHLQEPDINQEVYGLPEYLSALNATWLNESATLFRRRYYKNGSHAGFILYMTDAAQ 229 (368) Q Consensus 156 ------~~~~~~~~~~~~~~~~dviH~r~~~~~~~~~G~spi~~a~~~i~~~~~a~~~~~~~f~ng~~p~gil~~~~~~l 229 (368) |.+....|....++++||||+|.+++ ++++|+||+.++.++|+++.++++|+.++|+||++|+|||++++ .+ T Consensus 144 ~~~~~~y~~~~~~g~~~~~~~~evih~r~~~~-d~~~G~s~i~~~~~~i~~~~~~~~~~~~~f~ng~~~~gil~~~~-~l 221 (409) T protein:vir:10 144 SENNVWYLYTDDLGQRHKFMSDEILHFKGLTA-DGLAGLSVIELLNHLIENGKSSETYLNNFFKNGLQVKGLVQYAG-DL 221 (409) T ss_pred ccceEEEEEEeCCceeEEeccccEEEecCcCC-CCcccccHHHHHHHHHHHHHHHHHHHHHHHhccCCCcEEEEcCC-CC Confidence 33445667888999999999998875 78999999999999999999999999999999999999999875 68 Q ss_pred cHHHHHHHHHHHHHhc-cccccccccccccCccccccccccccchhhHHHHHHHHHHHHHHHHHHhCCChHHhccccccc Q lcl|Aclame:pro 230 KQEDVDTLREAMKSAK-GPGNFRNLFMYAPNGKKDGIQLLPVSEVAAKDEFWNIKNVTRDDQLAAHRVPPQLMGIIPNNT 308 (368) Q Consensus 230 ~~e~~~~~k~~~~~~~-g~~n~~~~~~l~~~g~~~g~~~~pl~~~~~d~qf~e~~~~~~~~Ia~~fgVPp~~lg~~~~~~ 308 (368) ++++.+++++.|++.+ |..|+|+++++ +.|++|+|++.+++|+||+|++++++++||++|||||++||+.++ T Consensus 222 ~~e~~~~~~~~~~~~~~g~~n~~~~~vl-----~~g~~~~~l~~~~~d~q~~e~~~~~~~~Ia~~fgVPp~~lg~~~~-- 294 (409) T protein:vir:10 222 NPEAEEVFKENFERMSSGLKNAHRIAML-----PIGYKFEPISQKLVDAQFLENSQLTIRQIASVFGVKMHQLNDLDR-- 294 (409) T ss_pred CHHHHHHHHHHHHHHhccccccCCceec-----CCCceEEEccCChhhHHHHHHHHHHHHHHHHHhCCCHHHcCCCCC-- Confidence 9999999999998855 55789999998 578999999999999999999999999999999999999998754 Q ss_pred ccccCHHHHHHHHHHHHHHHHHHHHHH-HHhhcCc-------ceEeechhhhhcCChhhhhhhhhhcC Q lcl|Aclame:pro 309 GGFGDVEKAAMVFARNEVKPLQDRLLA-INDWIGD-------EVVRFAPYALGGHDQPAAAPGGQRSA 368 (368) Q Consensus 309 ~~~sn~e~~~~~f~~~tl~P~~~~ie~-l~~~l~~-------~~~~F~~~~Llr~D~~~ra~~~~~~~ 368 (368) ++++|+|++.+.|+++||.||++.||+ ||++|.. .+++||.++|+++|.+++++..++.- T Consensus 295 ~~~~~~e~~~~~f~~~~l~P~~~~ie~~ln~kL~~~~~~~~~~~~~fd~~~ll~~d~~~~~~~~~~~~ 362 (409) T protein:vir:10 295 ATHSNITEQNREFYIDTLQSILNMYELEINYKLFLISEIKNGFYSKFNVDTILRADIKTRYESYKEAI 362 (409) T ss_pred CccccHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCchhccCCcEEEEechhhhccCHHHHHHHHHHHH Confidence 689999999999999999999999984 8887642 26999999999999999999777664 No 47 >protein:vir:94666 Length: 723 # NCBI annotation: portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:1527 # MgeName: mu1/6 # Cross-refs: genbank:acc:YP_579205;genbank:gi:93007441;genbank:GeneID:5076785 Probab=100.00 E-value=1.8e-67 Score=386.44 Aligned_cols=331 Identities=12% Similarity=0.072 Sum_probs=254.7 Q ss_pred CCcCCCCccccccccccccccCCCcchhhccccCceEEEECCCceeccChHHHHHHHHHHhccchhcccccHHHHHHHHH Q lcl|Aclame:pro 1 MSRNKTRRAARAASAHVRTANTDAPTEHHTDRAAQAEVFSFGDPVEVLDRRELLDYVECMRMGQWYEPPMPWDGLARSFR 80 (368) Q Consensus 1 m~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~r 80 (368) || . -|+.... ... .+......++ -...+...+++.|+.++. ++++..|+.++ + T Consensus 1 ~~-----------~-----~~~~~g~--~~~-~~~~~~~~~~-~~~~~~~~~V~acV~~Ia-~~iA~lpl~l~------~ 53 (723) T protein:vir:94 1 MT-----------T-----FPSGAGG--WNA-WSADSVFGNG-AKGWSNSAVAYRCISMLA-NNAASVDLVVR------G 53 (723) T ss_pred Cc-----------c-----cccCCCc--ccc-cccccccccc-HHHHhhhHHHHHHHHHHH-HhhccceeEEE------c Confidence 32 1 0111100 000 0000111100 122345556666666554 67888887642 2 Q ss_pred hcccccchhhhccchH-HhhccCCCCcCH-HHHHHHHHhHhhhCCeeEEEEecC---CcceEEEEEecccccccccCCC- Q lcl|Aclame:pro 81 AAAHHSSAVYVKRNIL-VSTFIPHPLLSR-ATFERLVLDWQVFGNAYLERRENV---LGGTIRLDTPLAKYVRRGLDLN- 154 (368) Q Consensus 81 ~~~~~~~~~~~~~~~~-l~~~~~n~~~~~-~~~~~~~~~~ll~Gnay~~i~r~~---~G~~~~L~~l~p~~v~~~~~~~- 154 (368) .+ ..+..+|+.+ ++..+|||+++. +||+.++.+++++||+|++|.|++ .|.|++|+|+++..+.+....+ T Consensus 54 ~~----~~~~~~~~l~~lL~~~PN~~~t~~~f~~~~~~~lll~Gnay~~i~r~~r~~~g~p~~l~~l~~~~~~v~~~~~~ 129 (723) T protein:vir:94 54 PD----GELDELHPLSQLWNVMPNRAMPAQVLKALSMTRLQLDGQCHLWLNYNGRTPAGVPDEIWYVYDRVTTIVATRAA 129 (723) T ss_pred CC----CccchhhHHHHHHhhCCCCCCCHHHHHHHHHHHHhhcCCeEEEEEecCCccccceeEEEEecCcceEEeecCCC Confidence 21 2233456644 455689998875 788889999999999999999765 4899999999998776543322 Q ss_pred ---------eeEEEeCCceEEEEcCccEEEecCCCCcCCccccchhhHHHHHHHHHHHHHHHHHHHHhccCCCceeEEeC Q lcl|Aclame:pro 155 ---------TYFFVQNWQQPYTFAAGSVFHLQEPDINQEVYGLPEYLSALNATWLNESATLFRRRYYKNGSHAGFILYMT 225 (368) Q Consensus 155 ---------~~~~~~~~~~~~~~~~~dviH~r~~~~~~~~~G~spi~~a~~~i~~~~~a~~~~~~~f~ng~~p~gil~~~ 225 (368) .|.+...+|..+.++++||||||.+++.++++|+|||.+++++|+++.++++|+.++|+||++|+|||+++ T Consensus 130 ~~~~~~~~~~y~~~~~~G~~~~~~~~dIiHir~~~~~dg~~G~Spi~~a~~~i~~~~aa~~~~~~~f~NG~~p~giL~~~ 209 (723) T protein:vir:94 130 DAVPQAQIIGYVIERTDGVRVPVLADEMLWLRFSDPYDPLAVMAPWKAARAAVDADFYAATWQRQSFKNGARPGGVVNLG 209 (723) T ss_pred ccceeeeeeEEEEEecCceeEEecccceEEecCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhcCCCcceEEEcC Confidence 12234467888899999999999998889999999999999999999999999999999999999999965 Q ss_pred CCCccHHHHHHHHHHHHHh-ccccccccccccccCc-----cccccccccccchhhHHHHHHHHHHHHHHHHHHhCCChH Q lcl|Aclame:pro 226 DAAQKQEDVDTLREAMKSA-KGPGNFRNLFMYAPNG-----KKDGIQLLPVSEVAAKDEFWNIKNVTRDDQLAAHRVPPQ 299 (368) Q Consensus 226 ~~~l~~e~~~~~k~~~~~~-~g~~n~~~~~~l~~~g-----~~~g~~~~pl~~~~~d~qf~e~~~~~~~~Ia~~fgVPp~ 299 (368) .+++++.+++++.|++. .|..|+|++++|...+ .+.|++|+|++++++|+||+|++++++++||++|||||+ T Consensus 210 --~l~~e~~~~~~~~~~~~~~G~~Nagk~~vL~g~~~~~~vl~~G~~~~~l~~s~~D~q~le~r~~~~~eIa~afgVPp~ 287 (723) T protein:vir:94 210 --DMDEQTFTKTVAAFRSQVEGVQNAGRHLLIAGQGSDGGAAGKGATFTSLSMSPAEMDYINSRMHSAEEVMLAFGIRKD 287 (723) T ss_pred --CCCHHHHHHHHHHHHHHhhchhhcCcceeecccccccccccCCceEEEccCCHHHHHHHHHHHHhHHHHHHHhCCChh Confidence 48999999999999875 5668999999986432 246899999999999999999999999999999999999 Q ss_pred HhcccccccccccCHHHHHHHHHHHHHHHHHHHHHH-HHhhcCcc-----eEeechhhhhcCChhhhhhhhhhcC Q lcl|Aclame:pro 300 LMGIIPNNTGGFGDVEKAAMVFARNEVKPLQDRLLA-INDWIGDE-----VVRFAPYALGGHDQPAAAPGGQRSA 368 (368) Q Consensus 300 ~lg~~~~~~~~~sn~e~~~~~f~~~tl~P~~~~ie~-l~~~l~~~-----~~~F~~~~Llr~D~~~ra~~~~~~~ 368 (368) +||. .++++|++++.+.|+++||.||+++||+ +|.+|.+. +++||...|||+|.++|++..+..- T Consensus 288 ~i~~----~st~sN~e~~~~~f~~~tL~P~~~~ie~~ln~~Ll~~~g~~~~~~f~~~~lLr~D~~~r~~~~~~~v 358 (723) T protein:vir:94 288 ALLG----GSTYENQAEAKAAVWTETLIPQMEVMASITDLQLLPDIGWTVEWDFNSVPALQEDLEAQAGRNQGYL 358 (723) T ss_pred HcCC----CCCcccHHHHHHHHHHHHHHHHHHHHHHHHhHhhcccccCceEEeecchhhhhcCHHHHHHHHHHHH Confidence 9963 3689999999999999999999999994 89887543 3788888999999999998776544 No 48 >protein:vir:81218 Length: 423 # NCBI annotation: gp3, phage portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:1893 # MgeName: BFK20 # Cross-refs: genbank:acc:YP_001456733;genbank:gi:157168376;interpro:IPR006427;interpro:IPR006944;uniprot:Q9MBK2;genbank:GeneID:5580341 Probab=100.00 E-value=1.3e-67 Score=387.21 Aligned_cols=346 Identities=10% Similarity=0.095 Sum_probs=260.5 Q ss_pred CCcCCCCccccccccccccccCCCcchhhccccCceEEEECCCcee----ccChHHHHHHHHHHhccchhcccccHHHHH Q lcl|Aclame:pro 1 MSRNKTRRAARAASAHVRTANTDAPTEHHTDRAAQAEVFSFGDPVE----VLDRRELLDYVECMRMGQWYEPPMPWDGLA 76 (368) Q Consensus 1 m~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~p~~----~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~ 76 (368) |.-.+.-..++.... ++......... ....... +..+. +....+|+.|+.++. .+++..|+. T Consensus 1 Mg~~~~~~~~~~~~~----~~~~~~~~~~~--~~~~~~~--~~~~~~~~~~~~~~~v~~~i~~ia-~~ia~lp~~----- 66 (423) T protein:vir:81 1 MGFLQKLGLAPSVVA----TPEPIELVGPI--FESLKLS--TKNMTVEQIWEDQPHLRTVTTFIA-RNVASLQLQ----- 66 (423) T ss_pred CchhHhhcccccccc----Ccccccccccc--ccccccc--cchhhHHHHHHhhhHHHHHHHHHH-HhHhhCceE----- Confidence 554433211111111 11110000000 0000111 11111 122345556666554 567888865 Q ss_pred HHHHhcccccchhhhccchHHhhccCCCCcCH-HHHHHHHHhHhhhCCeeEEEEecC--CcceEEEEEecccccccccCC Q lcl|Aclame:pro 77 RSFRAAAHHSSAVYVKRNILVSTFIPHPLLSR-ATFERLVLDWQVFGNAYLERRENV--LGGTIRLDTPLAKYVRRGLDL 153 (368) Q Consensus 77 ~~~r~~~~~~~~~~~~~~~~l~~~~~n~~~~~-~~~~~~~~~~ll~Gnay~~i~r~~--~G~~~~L~~l~p~~v~~~~~~ 153 (368) +++...+++.....+|+...+...|||+++. +||+.++.+++++||||++|.|+. .+.++.|+|+++..+++.... T Consensus 67 -~~~~~~dg~~~~~~~~~~~~ll~~PN~~~t~~~f~~~~~~~l~l~Gna~~~i~rd~~~~~~~~~l~p~~~~~v~~~~~~ 145 (423) T protein:vir:81 67 -AFERVEDGGRERVREGHLARVCKLANSDMTMYDLLERTMFDLCLYDEFFWLLPGDLGVDTPTLDIRPIPVSWVQRRAYK 145 (423) T ss_pred -EEEEecCCceeeeccchHHHHhhcCCCCCCHHHHHHHHHHHHhhcCCeEEEEEecCCcCcceEEEeecccceeeeeecc Confidence 3455555555556667765555689998875 788899999999999999999975 356778888888877665432 Q ss_pred C----eeEEEe----CCceEEEEcCccEEEecCCCCcCCccccchhhHHHHHHHHHHHHHHHHHHHHhccCCCceeEEeC Q lcl|Aclame:pro 154 N----TYFFVQ----NWQQPYTFAAGSVFHLQEPDINQEVYGLPEYLSALNATWLNESATLFRRRYYKNGSHAGFILYMT 225 (368) Q Consensus 154 ~----~~~~~~----~~~~~~~~~~~dviH~r~~~~~~~~~G~spi~~a~~~i~~~~~a~~~~~~~f~ng~~p~gil~~~ 225 (368) + .+|.+. .+|....++++||||+|.+++.+.++|+||+..++++|+.+.++++|..++|+||++|+|||+++ T Consensus 146 ~~~~~~~Y~~~~~~~~~g~~~~~~~~evih~r~~~~~~~~~G~spi~~~~~~i~~~~~~~~~~~~~f~ng~~p~gvi~~~ 225 (423) T protein:vir:81 146 DGWGSLDYIIIESGDNDGRSVKVPGERVIHRHGYNPKTMKRGKSPVQSLRDILGEQIEAAIFRAQMWRNGPRPGMVIMRD 225 (423) T ss_pred CCCcceEEEEEEecCCCceEEEEcccceEEecCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEec Confidence 2 233322 36778899999999999999877789999999999999999999999999999999999999875 Q ss_pred C----CCccHHHHHHHHHHHHHhc--cccccccccccccCccccccccccccchhhHHHHHHHHHHHHHHHHHHhCCChH Q lcl|Aclame:pro 226 D----AAQKQEDVDTLREAMKSAK--GPGNFRNLFMYAPNGKKDGIQLLPVSEVAAKDEFWNIKNVTRDDQLAAHRVPPQ 299 (368) Q Consensus 226 ~----~~l~~e~~~~~k~~~~~~~--g~~n~~~~~~l~~~g~~~g~~~~pl~~~~~d~qf~e~~~~~~~~Ia~~fgVPp~ 299 (368) . ..+++|+++++++.|++.+ |.+|+|++++| +.|++|+|++++++|+||+|++++++++||++|||||+ T Consensus 226 ~~~~~~~l~~e~~~~~~~~~~~~~~~~~~n~g~~~vl-----~~g~~~~~l~~s~~d~q~~e~~~~~~~eIa~~fgVPp~ 300 (423) T protein:vir:81 226 PESKAGKWDAESRTRFMANLRASFSPKSSDVGGTLLL-----EDGMKAENFHTTSKDEQTVETTKLSLQTVAQVYGINPT 300 (423) T ss_pred CcccCccCCHHHHHHHHHHHHHHhccccccCCcceec-----CCCceEEeccCChhhHHHHHHHHhhHHHHHHHhCCCHH Confidence 3 3589999999999998864 56899999998 67899999999999999999999999999999999999 Q ss_pred HhcccccccccccCHHHHHHHHHHHHHHHHHHHHH-HHHhhcCc--------ceEeechhhhhcCChhhhhhhhhhcC Q lcl|Aclame:pro 300 LMGIIPNNTGGFGDVEKAAMVFARNEVKPLQDRLL-AINDWIGD--------EVVRFAPYALGGHDQPAAAPGGQRSA 368 (368) Q Consensus 300 ~lg~~~~~~~~~sn~e~~~~~f~~~tl~P~~~~ie-~l~~~l~~--------~~~~F~~~~Llr~D~~~ra~~~~~~~ 368 (368) +||+.++ ++|+|+|++.+.|+++||.||++.|| ++|++|.+ .+++||.++|+|+|.++|++..+++- T Consensus 301 ~lg~~~~--~t~sn~e~~~~~f~~~~L~P~~~~ie~~l~~~L~~~~~~~~~~~~~~fd~~~llr~d~~~r~~~~~~~l 376 (423) T protein:vir:81 301 MVGQLDN--ANYSNVREFRKALYGDNLGSWIRIIQDVMNLFLLPRVGIDNEKFYFEFNLEEKLRASFEEAAEIKRAAV 376 (423) T ss_pred HhcCCCC--CCcccHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCccccccCccEEEecchhhhccCHHHHHHHHHHHH Confidence 9998765 68999999999999999999999998 58988753 26999999999999999999876642 No 49 >protein:vir:483 Length: 413 # NCBI annotation: putative portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:11 # MgeName: P27 # Cross-refs: genbank:acc:NP_543090;swissprot:trembl:q8w629;genbank:gi:18249902;uniprot:Q8W629;genbank:GeneID:929685 Probab=100.00 E-value=6.6e-67 Score=383.40 Aligned_cols=339 Identities=15% Similarity=0.188 Sum_probs=265.4 Q ss_pred CCc--C-CCCccccccccccccccCCCcchhhccccCceEEEECCC---ceeccChHHHHHHHHHHhccchhcccccHHH Q lcl|Aclame:pro 1 MSR--N-KTRRAARAASAHVRTANTDAPTEHHTDRAAQAEVFSFGD---PVEVLDRRELLDYVECMRMGQWYEPPMPWDG 74 (368) Q Consensus 1 m~~--~-k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~---p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 74 (368) |=- . |+|.... ..+......... .+...+ .|. ++..+...+++.|+..+. ..++..|+.+ T Consensus 1 ~~f~~~f~r~~~~~--------~~~~~~~~~~~~--~~~~~~-~g~~v~~~~~l~~~~v~~~i~~Ia-~~iA~~p~~~-- 66 (413) T protein:vir:48 1 MFFSGLFQRKSDAP--------VTTPAELAEAIG--LSYDTY-TGKRISSQRAMRLTAVYSCVRVLA-ESVGMLPCSL-- 66 (413) T ss_pred CccchhhccCccCC--------ccchHHHHHhhh--cCcccc-cCceechhhhhccHHHHHHHHHHH-HhhhhCceEE-- Confidence 432 2 2221111 111111111111 111111 121 233455667777777665 5678888653 Q ss_pred HHHHHHhcccccchhhhccchH-HhhccCCCCcCH-HHHHHHHHhHhhhCCeeEEEEecCCcceEEEEEecccccccccC Q lcl|Aclame:pro 75 LARSFRAAAHHSSAVYVKRNIL-VSTFIPHPLLSR-ATFERLVLDWQVFGNAYLERRENVLGGTIRLDTPLAKYVRRGLD 152 (368) Q Consensus 75 l~~~~r~~~~~~~~~~~~~~~~-l~~~~~n~~~~~-~~~~~~~~~~ll~Gnay~~i~r~~~G~~~~L~~l~p~~v~~~~~ 152 (368) ++... .+.....+|+.. ++...|||+++. +||+.++.+++++||||++++|+ .|+|++|+|++|++|++..+ T Consensus 67 ----~~~~~-~~~~~~~~~~~~~lL~~~PN~~~t~~~f~~~~~~~lll~Gn~~~~i~~~-~g~~~~L~~l~~~~v~~~~~ 140 (413) T protein:vir:48 67 ----YKISG-TLKTRVVDERLHKLVSAKPNGYMTPQEFWELVIVCLCLRGNFYAYKVKA-LGEVVELLPIDPGCVEPKLN 140 (413) T ss_pred ----EEecC-CcceeecccHHHHHHHhhccCCCCHHHHHHHHHHHHhhcCceEEEEEeC-CCcEEEEEEEcCceEEEEEc Confidence 23333 233344566643 555689998875 78889999999999999999997 58999999999999998776 Q ss_pred CCe---eEEEeCCceEEEEcCccEEEecCCCCcCCccccchhhHHHHHHHHHHHHHHHHHHHHhccCCCceeEEeCCCCc Q lcl|Aclame:pro 153 LNT---YFFVQNWQQPYTFAAGSVFHLQEPDINQEVYGLPEYLSALNATWLNESATLFRRRYYKNGSHAGFILYMTDAAQ 229 (368) Q Consensus 153 ~~~---~~~~~~~~~~~~~~~~dviH~r~~~~~~~~~G~spi~~a~~~i~~~~~a~~~~~~~f~ng~~p~gil~~~~~~l 229 (368) .++ |++...+|...+|+++||||++.++. ++++|+||+..++.+|+++.++++|..++|+||++|+|||++++ .+ T Consensus 141 ~~~~~~y~~~~~~g~~~~~~~~evih~~~~~~-d~~~G~s~i~~~~~~i~~~~~~~~~~~~~~~ng~~p~gil~~~~-~~ 218 (413) T protein:vir:48 141 SQWQPVYQVTFPDGSVDVLTQDEIWHVRTLTL-DGLVGLNPIAYAREAISLAAATEEHGARLFGNGAVTSGVLRTEQ-KL 218 (413) T ss_pred CCceEEEEEEecCceEEEEccccEEEecCcCC-CCcccccHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEeCC-CC Confidence 654 34445678888999999999998874 78999999999999999999999999999999999999999875 58 Q ss_pred cHHHHHHHHHHHHHhc-cccccccccccccCccccccccccccchhhHHHHHHHHHHHHHHHHHHhCCChHHhccccccc Q lcl|Aclame:pro 230 KQEDVDTLREAMKSAK-GPGNFRNLFMYAPNGKKDGIQLLPVSEVAAKDEFWNIKNVTRDDQLAAHRVPPQLMGIIPNNT 308 (368) Q Consensus 230 ~~e~~~~~k~~~~~~~-g~~n~~~~~~l~~~g~~~g~~~~pl~~~~~d~qf~e~~~~~~~~Ia~~fgVPp~~lg~~~~~~ 308 (368) ++|+.+++++.|++.+ |..|+|+++++ +.|++|++++++++|+||+|++++++++||++|||||++||..++ T Consensus 219 ~~e~~~~~~~~~~~~~~g~~n~g~~~vl-----~~g~~~~~l~~~~~d~q~~e~~~~~~~~Ia~~fgVPp~~lg~~~~-- 291 (413) T protein:vir:48 219 TPDAYERLKKDFEERHTGLGNAHRPMIL-----EMGLDWKSMALNAEDSQFLETRKFQLEEICRLFRVPLHMVQNTDR-- 291 (413) T ss_pred CHHHHHHHHHHHHHHhcCccccCcceec-----CCCceEEeccCChhHHHHHHHHHHHHHHHHHHhCCCHHHhCCCcC-- Confidence 9999999999998865 55899999988 678999999999999999999999999999999999999998654 Q ss_pred ccccCHHHHHHHHHHHHHHHHHHHHH-HHHhhcCcc------eEeechhhhhcCChhhhhhhhhhcC Q lcl|Aclame:pro 309 GGFGDVEKAAMVFARNEVKPLQDRLL-AINDWIGDE------VVRFAPYALGGHDQPAAAPGGQRSA 368 (368) Q Consensus 309 ~~~sn~e~~~~~f~~~tl~P~~~~ie-~l~~~l~~~------~~~F~~~~Llr~D~~~ra~~~~~~~ 368 (368) ++++|+|++.+.|+++||.||+++|| ++|++|.+. +++||.+.|+++|.+++++..++.- T Consensus 292 ~t~~n~e~~~~~f~~~~i~P~~~~ie~~l~~~L~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~ 358 (413) T protein:vir:48 292 ATFNNIEELGLGFINYSLVPYLTRIEQRINTGLVRESKQGKFYAKFNAGALLRGDMKSRFEAYATGI 358 (413) T ss_pred CCcccHHHHHHHHHHHHHHHHHHHHHHHHHhhccCccccCCeEEEEechhhhccCHHHHHHHHHHHH Confidence 78999999999999999999999998 599887532 6999999999999999999877654 No 50 >protein:vir:4156 Length: 542 # NCBI annotation: portal protein # Family: family:all:1379 # ACLAME annotation(s): phi:0000161 - phage head/capsid # MgeID: mge:87 # MgeName: psiM2 # Cross-refs: genbank:acc:NP_046965;genbank:gi:9630535;genbank:GeneID:1261709 Probab=100.00 E-value=3.6e-67 Score=384.85 Aligned_cols=346 Identities=17% Similarity=0.170 Sum_probs=249.8 Q ss_pred CCcC-CCCccccccccccccccCCCcchhhccccCceEEEECCCceeccChHHHHHHHHHHhccchhcccccHHHHHHHH Q lcl|Aclame:pro 1 MSRN-KTRRAARAASAHVRTANTDAPTEHHTDRAAQAEVFSFGDPVEVLDRRELLDYVECMRMGQWYEPPMPWDGLARSF 79 (368) Q Consensus 1 m~~~-k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~ 79 (368) ||=+ ..+.++..+. ...... .........+ ..|.. ...+. .+ +...|+...|+..+. T Consensus 6 ~~i~s~~~~~~i~~~----~~~s~~-----~~~~~~~~~~--~pp~~---~~~la---~l-----~~~n~~v~scI~~ia 63 (542) T protein:vir:41 6 LSIRSLEKYKAIKRE----EVESQA-----LGETRFEEYV--EPKVN---PLVLL---SL-----LQVNPYHASACSIKA 63 (542) T ss_pred ccccccccchhhhhc----cccccc-----cccccCCccc--cCCCC---HHHHH---HH-----HhhcHHHHHHHHHHH Confidence 4422 1111111100 000000 0000000111 11211 11000 00 011122222222222 Q ss_pred HhcccccchhhhccchHHhhccCCCCcCH-HHHHHHHHhHhhhCCeeEEEEecCCcceEEEEEecccccccccCCCeeEE Q lcl|Aclame:pro 80 RAAAHHSSAVYVKRNILVSTFIPHPLLSR-ATFERLVLDWQVFGNAYLERRENVLGGTIRLDTPLAKYVRRGLDLNTYFF 158 (368) Q Consensus 80 r~~~~~~~~~~~~~~~~l~~~~~n~~~~~-~~~~~~~~~~ll~Gnay~~i~r~~~G~~~~L~~l~p~~v~~~~~~~~~~~ 158 (368) +..+..+-.+..+....+..+.|||+++. +|++.++.+++++||||++++||..|+|++|+|++|.+|++..+++.|+. T Consensus 64 ~~IA~l~~~~~~~~~~~l~~~lpN~~~s~~~f~~~~v~~lll~Gnayi~i~rd~~G~~~~L~~l~~~~v~v~~d~~~~~~ 143 (542) T protein:vir:41 64 NDIIRTGYILEGDDEGVVDEFIRACKPSFEYVLLRALEDLQVFNYCTLEVVRDDRGDPIRFEYIPSHTIRVHKDGSRYRQ 143 (542) T ss_pred HHHhhCceeeecccchhhhhhcCCCCCCHHHHHHHHHHHHhhcCCeEEEEEEcCCCcEEEEEEEcCcceEEEEcCCeeEe Confidence 22222222222233344566789998876 68889999999999999999999999999999999999999887776543 Q ss_pred EeCCc--------------------eEEEEcCccEEEecCCCCcCCccccchhhHHHHHHHHHHHHHHHHHHHHhccCCC Q lcl|Aclame:pro 159 VQNWQ--------------------QPYTFAAGSVFHLQEPDINQEVYGLPEYLSALNATWLNESATLFRRRYYKNGSHA 218 (368) Q Consensus 159 ~~~~~--------------------~~~~~~~~dviH~r~~~~~~~~~G~spi~~a~~~i~~~~~a~~~~~~~f~ng~~p 218 (368) +..+. ....++++||||||.+++.+++||+|||.+++.+|.++.++++|+.++|+||++| T Consensus 144 ~~~~~~~~~~~~y~~~~~~~~~~g~~~~~~~~~eIiHir~~~~~~~~~Glspi~~~~~~i~~~~~~~~~~~~~f~Ng~~p 223 (542) T protein:vir:41 144 TWDGVNITHFKDYRYEGEINPETGEDQDSVGANELVFIHIPSPVCSYYGVPRYVSAAPAILAMQKIDEYNYAFFDNYTIP 223 (542) T ss_pred eecCCcceeEEeecccccccccccccccccCcccEEEecCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhccCCc Confidence 32221 1234778899999999988999999999999999999999999999999999999 Q ss_pred ceeEEeCC---------CCccHHHHHHHHHHHHHh-ccc-cccccccccc-cCccccccccccccchhhHHHHHHHHHHH Q lcl|Aclame:pro 219 GFILYMTD---------AAQKQEDVDTLREAMKSA-KGP-GNFRNLFMYA-PNGKKDGIQLLPVSEVAAKDEFWNIKNVT 286 (368) Q Consensus 219 ~gil~~~~---------~~l~~e~~~~~k~~~~~~-~g~-~n~~~~~~l~-~~g~~~g~~~~pl~~~~~d~qf~e~~~~~ 286 (368) +|||++++ ..+++++.+++++.|++. .|. +|+|+++++. +++.++|++|+|++++++|+||+|+++++ T Consensus 224 ~gIL~~~~~l~de~~~~~~~~~e~~~~lk~~~~~~~~g~~~n~gk~~vL~~~~~~~~g~~~~pl~~~~~d~qfle~~~~~ 303 (542) T protein:vir:41 224 SYVITVTGEFEDELEEDPDGNPTGRTVIQALIEDNFKHLKEAPHTPLVFSIPGGDTVKVTFTPLNTSQKELSFREYAAEK 303 (542) T ss_pred cEEEEeCCccccccccccccCHHHHHHHHHHHHHHHhhhhcccCceeEeeccCCcccceeEEEcCCChhHHHHHHHHHHH Confidence 99998864 356889999999999875 454 6899999885 44556899999999999999999999999 Q ss_pred HHHHHHHhCCChHHhcccccccccccCHHHHHHHHHHHHHHHHHHHHHH-HHhhcCcc-----eEeechhhhhcCChhhh Q lcl|Aclame:pro 287 RDDQLAAHRVPPQLMGIIPNNTGGFGDVEKAAMVFARNEVKPLQDRLLA-INDWIGDE-----VVRFAPYALGGHDQPAA 360 (368) Q Consensus 287 ~~~Ia~~fgVPp~~lg~~~~~~~~~sn~e~~~~~f~~~tl~P~~~~ie~-l~~~l~~~-----~~~F~~~~Llr~D~~~r 360 (368) +++||++|||||++||+.++++.+++|+|++.+.|+++||.|+++.||+ ||++|.+. +++|+...|+++|.+++ T Consensus 304 ~~~Ia~afgVPp~~lG~~~~~t~n~sn~Eq~~~~f~~~tL~P~~~~ie~~ln~~L~~~~~~~~~~~f~~~~ll~~d~~~~ 383 (542) T protein:vir:41 304 KYDIAAAHMIDPYRLGIADTGPLGGNFAEVTRRTYYESVVRPQQNIISSILTDFFQVKFNPKTRFKFNDETLLESDSVRN 383 (542) T ss_pred HHHHHHHhCCCHHHhCcCCCcccccccHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCCceEEEecchhhcchHHHHH Confidence 9999999999999999988777788999999999999999999999985 99887543 58999999999998877 Q ss_pred hhhhhhcC Q lcl|Aclame:pro 361 APGGQRSA 368 (368) Q Consensus 361 a~~~~~~~ 368 (368) +...-+.. T Consensus 384 ~~~~v~~G 391 (542) T protein:vir:41 384 CALLVQSG 391 (542) T ss_pred HHHHHhCC Confidence 66543333 No 51 >protein:vir:1266 Length: 416 # NCBI annotation: hypothetical protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:329 # MgeName: phi-105 # Cross-refs: genbank:acc:NP_690758;genbank:gi:22854998;genbank:GeneID:955213 Probab=100.00 E-value=1.2e-66 Score=381.90 Aligned_cols=344 Identities=13% Similarity=0.126 Sum_probs=262.4 Q ss_pred CCcCCCCccccccccccccccCCCcchhhccccC-ceEEEECCCceeccChHHHHHHHHHHhccchhcccccHHHHHHHH Q lcl|Aclame:pro 1 MSRNKTRRAARAASAHVRTANTDAPTEHHTDRAA-QAEVFSFGDPVEVLDRRELLDYVECMRMGQWYEPPMPWDGLARSF 79 (368) Q Consensus 1 m~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~ 79 (368) |=-.|=.+++-..+..... .............. +...+ .+...+...+++.|+.++. .+++..|+.+ + T Consensus 1 m~~~~~f~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~v---~~~~al~~~~v~~~i~~Ia-~~ia~l~~~~------~ 69 (416) T protein:vir:12 1 MLLERMFEKRSGSSDHEDG-FNNILLNMFGGRKTASGERV---SESNSLVQPDIFACVNVLS-DDIAKLPIHT------Y 69 (416) T ss_pred CccchhcccccCccccCcc-chhHHHHhhcCcccccCcee---chhhhhccHHHHHHHHHHH-HhhhhCceEE------E Confidence 3222211111001101110 00000011100000 00111 1233455666777776654 5677778643 2 Q ss_pred HhcccccchhhhccchH-HhhccCCCCcCH-HHHHHHHHhHhhhCCeeEEEEecCCcceEEEEEecccccccccCCC--- Q lcl|Aclame:pro 80 RAAAHHSSAVYVKRNIL-VSTFIPHPLLSR-ATFERLVLDWQVFGNAYLERRENVLGGTIRLDTPLAKYVRRGLDLN--- 154 (368) Q Consensus 80 r~~~~~~~~~~~~~~~~-l~~~~~n~~~~~-~~~~~~~~~~ll~Gnay~~i~r~~~G~~~~L~~l~p~~v~~~~~~~--- 154 (368) +.. ..+.....+|+.. ++...|||+++. +|++.++.+++++||||++|.|+..|+|.+|+|++|.+|++..+.+ T Consensus 70 ~~~-~~~~~~~~~~~l~~~l~~~PN~~~t~~~f~~~~v~~lll~Gna~~~i~r~~~G~~~~L~~l~~~~v~v~~~~~~~~ 148 (416) T protein:vir:12 70 KRT-DGGIERKPEHKSAHAVYARPNPYMTAFTWKKLMMTHVLTWGNAYSYIQFGSHGYPEALFPLRPDYTNAYVHPTTGM 148 (416) T ss_pred Eec-CCccccccccHHHHHHHhhcccCCCHHHHHHHHHHHHhhcCCeEEEEEECCCCcEEEEEEECCcceEEEEeCCCcE Confidence 322 2344444556633 455689998875 7888999999999999999999999999999999999999765433 Q ss_pred eeEEEeCCceEEEEcCccEEEecCCCCcCCccccchhhHHHHHHHHHHHHHHHHHHHHhccCCCceeEEeCCCCccHHHH Q lcl|Aclame:pro 155 TYFFVQNWQQPYTFAAGSVFHLQEPDINQEVYGLPEYLSALNATWLNESATLFRRRYYKNGSHAGFILYMTDAAQKQEDV 234 (368) Q Consensus 155 ~~~~~~~~~~~~~~~~~dviH~r~~~~~~~~~G~spi~~a~~~i~~~~~a~~~~~~~f~ng~~p~gil~~~~~~l~~e~~ 234 (368) .||.+..+|..+.++++||||+|.+++ ++++|+||+.+++.++.++.++++|..++|+||++|++||++++ .+++|++ T Consensus 149 ~~~~~~~~g~~~~~~~~eiih~~~~~~-~~~~G~s~i~~~~~~i~~~~~~~~~~~~~~~ng~~p~~il~~~~-~~~~e~~ 226 (416) T protein:vir:12 149 LWYQTVLNGKAIELYDYEVLHFKGLST-DGIHGKSPIGVVREHIGAQAAATKYNAKLYKNEATPRGILKVPA-FLDEKPK 226 (416) T ss_pred EEEEEecCCeEEEecCccEEEecCcCC-CCcccccHHHHHHHHHHHHHHHHHHHHHHHhcCCCCceEEecCC-CCCHHHH Confidence 367777788889999999999998875 78999999999999999999999999999999999999999875 6899999 Q ss_pred HHHHHHHHHhccccccccccccccCccccccccccccchhhHHHHHHHHHHHHHHHHHHhCCChHHhcccccccccccCH Q lcl|Aclame:pro 235 DTLREAMKSAKGPGNFRNLFMYAPNGKKDGIQLLPVSEVAAKDEFWNIKNVTRDDQLAAHRVPPQLMGIIPNNTGGFGDV 314 (368) Q Consensus 235 ~~~k~~~~~~~g~~n~~~~~~l~~~g~~~g~~~~pl~~~~~d~qf~e~~~~~~~~Ia~~fgVPp~~lg~~~~~~~~~sn~ 314 (368) +++++.|+... |+++++++ +.|++|+|++++++|+||+|++++++++||++|||||++||...+ ++|+|+ T Consensus 227 ~~~~~~~~~~~---~~~~~~vl-----~~g~~~~~l~~~~~d~q~~e~~~~~~~~Ia~~fgVPp~~lg~~~~--~t~sn~ 296 (416) T protein:vir:12 227 ENVRKEWKRVN---KVENIAII-----DYGLEYQSISMPLQEAQFVESMKFNKAQISMIYKVPLHKLNELDK--ATFSNI 296 (416) T ss_pred HHHHHHHHHHh---cCCCeeec-----CCCceEEEccCChhhHHHHHHHHHHHHHHHHHhCCCHHHhCCccC--CCcccH Confidence 99999998754 56778877 578999999999999999999999999999999999999998654 689999 Q ss_pred HHHHHHHHHHHHHHHHHHHH-HHHhhcCc-------ceEeechhhhhcCChhhhhhhhhhcC Q lcl|Aclame:pro 315 EKAAMVFARNEVKPLQDRLL-AINDWIGD-------EVVRFAPYALGGHDQPAAAPGGQRSA 368 (368) Q Consensus 315 e~~~~~f~~~tl~P~~~~ie-~l~~~l~~-------~~~~F~~~~Llr~D~~~ra~~~~~~~ 368 (368) |++.+.|+++||.||+..|| ++|++|.+ .+++||.++|+++|.+++++.+++.. T Consensus 297 e~~~~~f~~~~l~P~~~~ie~~l~~~l~~~~~~~~g~~i~fd~~~l~~~d~~~~~~~~~~~~ 358 (416) T protein:vir:12 297 EHQSIEYVRNTLQPWIVNFEQELNVKLFLDHDQKSGHYVKFNIDSELRGDSKTQAEYLKTLH 358 (416) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcCchhhcCCceEEeechhhhccCHHHHHHHHHHHH Confidence 99999999999999999998 48988743 26999999999999999999766655 No 52 >protein:vir:4598 Length: 416 # NCBI annotation: portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:101 # MgeName: PVL # Cross-refs: genbank:acc:NP_058443;genbank:gi:9635169;genbank:GeneID:1262702 Probab=100.00 E-value=4.4e-66 Score=378.88 Aligned_cols=337 Identities=12% Similarity=0.154 Sum_probs=257.1 Q ss_pred CCcCCCCccccccccccccccCCCc--chhhcccc-CceEEEECCCceeccChHHHHHHHHHHhccchhcccccHHHHHH Q lcl|Aclame:pro 1 MSRNKTRRAARAASAHVRTANTDAP--TEHHTDRA-AQAEVFSFGDPVEVLDRRELLDYVECMRMGQWYEPPMPWDGLAR 77 (368) Q Consensus 1 m~~~k~~~~~~~~~~~~~~~~~~~~--~~~~~~~~-~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~ 77 (368) |..-+++.++... ..+.+.. ........ .....+ .+..++...+|+.|+.++. .+++..|+.+. T Consensus 1 Mg~f~~~~~r~~~-----~~~~~~~~~~~~~~~~~~~~~~~~---~~~~al~~~~v~~cv~~Ia-~~iA~~p~~~~---- 67 (416) T protein:vir:45 1 MGIFYKNEKRDLQ-----YNEDDLQMMVQTLPGFQGTKLRQY---KDIEAIRHSDIFTAVMMIA-SDLARMPIRVT---- 67 (416) T ss_pred CCccccccccccc-----CCCcchhHHHHHhccccccCcccc---chhhhhcchHHHHHHHHHH-HhhccCceEEe---- Confidence 8876543333111 1111110 01111100 011111 1344567777888877764 56777786532 Q ss_pred HHHhcccccchhhhccc-hHHhhccCCCCcCH-HHHHHHHHhHhhhCCeeEEEEecCCcceEEEEEecccccccccCCCe Q lcl|Aclame:pro 78 SFRAAAHHSSAVYVKRN-ILVSTFIPHPLLSR-ATFERLVLDWQVFGNAYLERRENVLGGTIRLDTPLAKYVRRGLDLNT 155 (368) Q Consensus 78 ~~r~~~~~~~~~~~~~~-~~l~~~~~n~~~~~-~~~~~~~~~~ll~Gnay~~i~r~~~G~~~~L~~l~p~~v~~~~~~~~ 155 (368) + .+ ....+|+ ..++...|||+++. +||+.++.+++++||||++|+|+..|+|++|+|++|++|++..+.++ T Consensus 68 --~----~~-~~~~~~~~~~lL~~~PN~~~t~~~f~~~~~~~lll~Gna~~~i~r~~~G~~~~L~~i~~~~v~v~~~~~g 140 (416) T protein:vir:45 68 --V----NG-QINYSDRIVNLLNTRPNPMYNGYIFKLVVFVSALLTSHGYIEITRDKTGEPMNLTFRKTSEIELKSDARG 140 (416) T ss_pred --c----Cc-cccccchHHHHHhcccccCCCHHHHHHHHHHHHhhcCCeEEEEEECCCCcEEEEEEEcCceeEEEECCCc Confidence 1 11 2223444 33556789998875 78899999999999999999999999999999999999998776553 Q ss_pred --eEEE-e----CCceEEEEcCccEEEecCCCCcCCccccchhhHHHHHHHHHHHHHHHHHHHHhccCCCceeEEeCCCC Q lcl|Aclame:pro 156 --YFFV-Q----NWQQPYTFAAGSVFHLQEPDINQEVYGLPEYLSALNATWLNESATLFRRRYYKNGSHAGFILYMTDAA 228 (368) Q Consensus 156 --~~~~-~----~~~~~~~~~~~dviH~r~~~~~~~~~G~spi~~a~~~i~~~~~a~~~~~~~f~ng~~p~gil~~~~~~ 228 (368) +|.+ . ..+....++++||||||.++ .++++|+||+..++++|+++.++++|..++|+||++|+|||++++.. T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~evihir~~~-~d~~~G~s~i~~~~~~i~~~~~~~~~~~~~f~ng~~~~gil~~~~~~ 219 (416) T protein:vir:45 141 RLYYFHQRIDSNGNNIERNVKFEDMLDIKFYS-LDGINGLSLLDTLSRTIESDNNGKDFLNNFLRNGTHAGGILKMKGVL 219 (416) T ss_pred cEEEEEEEecCCCceeEEEEccccEEEeccCC-CCCccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCCcEEEEeCCCC Confidence 3222 2 12345789999999999876 47899999999999999999999999999999999999999998766 Q ss_pred ccHHHHHHHHHHHHHhc-cccccccccccccCccccccccccccchhhHHHHHHHHHHHHHHHHHHhCCChHHhcccccc Q lcl|Aclame:pro 229 QKQEDVDTLREAMKSAK-GPGNFRNLFMYAPNGKKDGIQLLPVSEVAAKDEFWNIKNVTRDDQLAAHRVPPQLMGIIPNN 307 (368) Q Consensus 229 l~~e~~~~~k~~~~~~~-g~~n~~~~~~l~~~g~~~g~~~~pl~~~~~d~qf~e~~~~~~~~Ia~~fgVPp~~lg~~~~~ 307 (368) .++++++++++.|++.+ |..|+|+++++ +.|++|+|++++++|+||+|++++++++||++|||||+++|... T Consensus 220 ~~~~~~~~~~~~~~~~~~g~~nag~~~vl-----~~g~~~~~l~~~~~d~q~~e~~~~~~~~Ia~~fgVPp~~lg~~~-- 292 (416) T protein:vir:45 220 DNKKARDRAREEFHKSFSGTKQAGKVVVL-----DESMTFDQLEVDTEVLKLIRENKSSTREIAGVFGIPLHKFGIET-- 292 (416) T ss_pred CCHHHHHHHHHHHHHHhcCccccCceeec-----CCCceeEeccCCHHHHHHHHHHHHHHHHHHHHhCCCHHHcCCCC-- Confidence 67889999999998765 56899999988 67899999999999999999999999999999999999998632 Q ss_pred cccccCHHHHHHHHHHHHHHHHHHHHH-HHHhhcCc----ceEeechhhhhcCChhhhhhhhhhcC Q lcl|Aclame:pro 308 TGGFGDVEKAAMVFARNEVKPLQDRLL-AINDWIGD----EVVRFAPYALGGHDQPAAAPGGQRSA 368 (368) Q Consensus 308 ~~~~sn~e~~~~~f~~~tl~P~~~~ie-~l~~~l~~----~~~~F~~~~Llr~D~~~ra~~~~~~~ 368 (368) .+ ++.+++...|. +||.|+++.|| ++|++|.+ .+++||.+.|+++|.++|++..++.- T Consensus 293 -~~-~~~~~~~~~~~-~~l~P~~~~ie~~ln~~l~~~~~~~~~~f~~~~l~~~D~~~~~~~~~~~~ 355 (416) T protein:vir:45 293 -AN-MSITDANLDYL-STLKPYITCVCAELNFKFNDEYVNREFKFDTTEIRVVDEKTQAEIDKINI 355 (416) T ss_pred -CC-ccHHHHHHHHH-HHHHHHHHHHHHHHhhhccccccCceEEEechhhhccCHHHHHHHHHHHH Confidence 22 35677776664 69999999998 59998864 36899999999999999999877754 No 53 >protein:vir:81095 Length: 416 # NCBI annotation: portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:1891 # MgeName: tp310-1 # Cross-refs: genbank:acc:YP_001429872;genbank:gi:156603925;genbank:GeneID:5525315 Probab=100.00 E-value=4.4e-66 Score=378.88 Aligned_cols=337 Identities=12% Similarity=0.154 Sum_probs=257.1 Q ss_pred CCcCCCCccccccccccccccCCCc--chhhcccc-CceEEEECCCceeccChHHHHHHHHHHhccchhcccccHHHHHH Q lcl|Aclame:pro 1 MSRNKTRRAARAASAHVRTANTDAP--TEHHTDRA-AQAEVFSFGDPVEVLDRRELLDYVECMRMGQWYEPPMPWDGLAR 77 (368) Q Consensus 1 m~~~k~~~~~~~~~~~~~~~~~~~~--~~~~~~~~-~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~ 77 (368) |..-+++.++... ..+.+.. ........ .....+ .+..++...+|+.|+.++. .+++..|+.+. T Consensus 1 Mg~f~~~~~r~~~-----~~~~~~~~~~~~~~~~~~~~~~~~---~~~~al~~~~v~~cv~~Ia-~~iA~~p~~~~---- 67 (416) T protein:vir:81 1 MGIFYKNEKRDLQ-----YNEDDLQMMVQTLPGFQGTKLRQY---KDIEAIRHSDIFTAVMMIA-SDLARMPIRVT---- 67 (416) T ss_pred CCccccccccccc-----CCCcchhHHHHHhccccccCcccc---chhhhhcchHHHHHHHHHH-HhhccCceEEe---- Confidence 8876543333111 1111110 01111100 011111 1344567777888877764 56777786532 Q ss_pred HHHhcccccchhhhccc-hHHhhccCCCCcCH-HHHHHHHHhHhhhCCeeEEEEecCCcceEEEEEecccccccccCCCe Q lcl|Aclame:pro 78 SFRAAAHHSSAVYVKRN-ILVSTFIPHPLLSR-ATFERLVLDWQVFGNAYLERRENVLGGTIRLDTPLAKYVRRGLDLNT 155 (368) Q Consensus 78 ~~r~~~~~~~~~~~~~~-~~l~~~~~n~~~~~-~~~~~~~~~~ll~Gnay~~i~r~~~G~~~~L~~l~p~~v~~~~~~~~ 155 (368) + .+ ....+|+ ..++...|||+++. +||+.++.+++++||||++|+|+..|+|++|+|++|++|++..+.++ T Consensus 68 --~----~~-~~~~~~~~~~lL~~~PN~~~t~~~f~~~~~~~lll~Gna~~~i~r~~~G~~~~L~~i~~~~v~v~~~~~g 140 (416) T protein:vir:81 68 --V----NG-QINYSDRIVNLLNTRPNPMYNGYIFKLVVFVSALLTSHGYIEITRDKTGEPMNLTFRKTSEIELKSDARG 140 (416) T ss_pred --c----Cc-cccccchHHHHHhcccccCCCHHHHHHHHHHHHhhcCCeEEEEEECCCCcEEEEEEEcCceeEEEECCCc Confidence 1 11 2223444 33556789998875 78899999999999999999999999999999999999998776553 Q ss_pred --eEEE-e----CCceEEEEcCccEEEecCCCCcCCccccchhhHHHHHHHHHHHHHHHHHHHHhccCCCceeEEeCCCC Q lcl|Aclame:pro 156 --YFFV-Q----NWQQPYTFAAGSVFHLQEPDINQEVYGLPEYLSALNATWLNESATLFRRRYYKNGSHAGFILYMTDAA 228 (368) Q Consensus 156 --~~~~-~----~~~~~~~~~~~dviH~r~~~~~~~~~G~spi~~a~~~i~~~~~a~~~~~~~f~ng~~p~gil~~~~~~ 228 (368) +|.+ . ..+....++++||||||.++ .++++|+||+..++++|+++.++++|..++|+||++|+|||++++.. T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~evihir~~~-~d~~~G~s~i~~~~~~i~~~~~~~~~~~~~f~ng~~~~gil~~~~~~ 219 (416) T protein:vir:81 141 RLYYFHQRIDSNGNNIERNVKFEDMLDIKFYS-LDGINGLSLLDTLSRTIESDNNGKDFLNNFLRNGTHAGGILKMKGVL 219 (416) T ss_pred cEEEEEEEecCCCceeEEEEccccEEEeccCC-CCCccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCCcEEEEeCCCC Confidence 3222 2 12345789999999999876 47899999999999999999999999999999999999999998766 Q ss_pred ccHHHHHHHHHHHHHhc-cccccccccccccCccccccccccccchhhHHHHHHHHHHHHHHHHHHhCCChHHhcccccc Q lcl|Aclame:pro 229 QKQEDVDTLREAMKSAK-GPGNFRNLFMYAPNGKKDGIQLLPVSEVAAKDEFWNIKNVTRDDQLAAHRVPPQLMGIIPNN 307 (368) Q Consensus 229 l~~e~~~~~k~~~~~~~-g~~n~~~~~~l~~~g~~~g~~~~pl~~~~~d~qf~e~~~~~~~~Ia~~fgVPp~~lg~~~~~ 307 (368) .++++++++++.|++.+ |..|+|+++++ +.|++|+|++++++|+||+|++++++++||++|||||+++|... T Consensus 220 ~~~~~~~~~~~~~~~~~~g~~nag~~~vl-----~~g~~~~~l~~~~~d~q~~e~~~~~~~~Ia~~fgVPp~~lg~~~-- 292 (416) T protein:vir:81 220 DNKKARDRAREEFHKSFSGTKQAGKVVVL-----DESMTFDQLEVDTEVLKLIRENKSSTREIAGVFGIPLHKFGIET-- 292 (416) T ss_pred CCHHHHHHHHHHHHHHhcCccccCceeec-----CCCceeEeccCCHHHHHHHHHHHHHHHHHHHHhCCCHHHcCCCC-- Confidence 67889999999998765 56899999988 67899999999999999999999999999999999999998632 Q ss_pred cccccCHHHHHHHHHHHHHHHHHHHHH-HHHhhcCc----ceEeechhhhhcCChhhhhhhhhhcC Q lcl|Aclame:pro 308 TGGFGDVEKAAMVFARNEVKPLQDRLL-AINDWIGD----EVVRFAPYALGGHDQPAAAPGGQRSA 368 (368) Q Consensus 308 ~~~~sn~e~~~~~f~~~tl~P~~~~ie-~l~~~l~~----~~~~F~~~~Llr~D~~~ra~~~~~~~ 368 (368) .+ ++.+++...|. +||.|+++.|| ++|++|.+ .+++||.+.|+++|.++|++..++.- T Consensus 293 -~~-~~~~~~~~~~~-~~l~P~~~~ie~~ln~~l~~~~~~~~~~f~~~~l~~~D~~~~~~~~~~~~ 355 (416) T protein:vir:81 293 -AN-MSITDANLDYL-STLKPYITCVCAELNFKFNDEYVNREFKFDTTEIRVVDEKTQAEIDKINI 355 (416) T ss_pred -CC-ccHHHHHHHHH-HHHHHHHHHHHHHHhhhccccccCceEEEechhhhccCHHHHHHHHHHHH Confidence 22 35677776664 69999999998 59998864 36899999999999999999877754 No 54 >protein:vir:8418 Length: 409 # NCBI annotation: gp13 # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:155 # MgeName: Omega # Cross-refs: genbank:acc:NP_818314;genbank:gi:29566750;genbank:GeneID:1260067 Probab=100.00 E-value=5e-66 Score=378.60 Aligned_cols=341 Identities=15% Similarity=0.135 Sum_probs=259.6 Q ss_pred CCcCCCCccccccccccccccCCCcchhhccccCceEEEE-CCC---ceeccChHHHHHHHHHHhccchhcccccHHHHH Q lcl|Aclame:pro 1 MSRNKTRRAARAASAHVRTANTDAPTEHHTDRAAQAEVFS-FGD---PVEVLDRRELLDYVECMRMGQWYEPPMPWDGLA 76 (368) Q Consensus 1 m~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~---p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~ 76 (368) |+--.+-.+++.. ........... .....++ .|+ +...+...+|++|+..+. .+++..|+.+. T Consensus 1 Mgl~~~~f~~~~~--~~~~~~~~~~~-------~~~~~~~~~g~~v~~~~al~~~~v~~~v~~ia-~~iA~lp~~~~--- 67 (409) T protein:vir:84 1 MSLFTRIFSGPSE--ERTLTKISGIP-------SPAEDWAMHGDRPGANSAMTLGAFYACVTLLA-DTVASLSIDAY--- 67 (409) T ss_pred CchhhhhhcCCCc--ccccccccccc-------cccchhhccCcccchhhhhccHHHHHHHHHHH-HhhhhCceEEE--- Confidence 6644321111100 00011111000 0011111 122 234455566777776554 56777786532 Q ss_pred HHHHhcccccchhhhccch-HHhhccCCCCcCH-HHHHHHHHhHhhhCCeeEEEE-ecCCcceEEEEEecccccccccCC Q lcl|Aclame:pro 77 RSFRAAAHHSSAVYVKRNI-LVSTFIPHPLLSR-ATFERLVLDWQVFGNAYLERR-ENVLGGTIRLDTPLAKYVRRGLDL 153 (368) Q Consensus 77 ~~~r~~~~~~~~~~~~~~~-~l~~~~~n~~~~~-~~~~~~~~~~ll~Gnay~~i~-r~~~G~~~~L~~l~p~~v~~~~~~ 153 (368) +.. ..+ ....|+. .++...|||+++. +|++.++.+++++||+|++|. ++..|+|++|+|++|.+|++.... T Consensus 68 ---~~~-~~~--~~~~~~l~~lL~~~PN~~~t~~~f~~~l~~~l~l~Gn~~~~i~~~~~~g~~~~L~~l~p~~v~v~~~~ 141 (409) T protein:vir:84 68 ---RKK-DNV--RIPVSPAPKLLESTPYPGLTWFDWLWMLMESLAVTGNAFGYISARDEANRPTAIMPIHPDCIHVTDAK 141 (409) T ss_pred ---Eec-CCc--ccccchHHHHhhccCCCCCCHHHHHHHHHHHHhhcCCeEEEEEEECCCCceEEEEEEcCceeEEEEcC Confidence 222 112 2234553 3455689998875 788899999999999999986 678899999999999999876443 Q ss_pred C--e-eEEEeCCceEEEEcCccEEEecCCCCcCCccccchhhHHHHHHHHHHHHHHHHHHHHhccCCCceeEEeCCCCcc Q lcl|Aclame:pro 154 N--T-YFFVQNWQQPYTFAAGSVFHLQEPDINQEVYGLPEYLSALNATWLNESATLFRRRYYKNGSHAGFILYMTDAAQK 230 (368) Q Consensus 154 ~--~-~~~~~~~~~~~~~~~~dviH~r~~~~~~~~~G~spi~~a~~~i~~~~~a~~~~~~~f~ng~~p~gil~~~~~~l~ 230 (368) + + ++++.......+|+++||||++.+++.+.++|+||+..+..+|.++.++++|..++|+||++|+|||++++ .++ T Consensus 142 ~~~~~~~~~~~~~~g~~~~~~dvih~~~~~~~~~~~G~s~i~~~~~~i~~~~~~~~~~~~~f~ng~~p~gil~~~~-~l~ 220 (409) T protein:vir:84 142 DEDGDWIEPVYRIDGKVVPNHRIMHIKRYPVAGCALGMSPIEKAASAIGLGLAAERYGLRWFRDSANPSGILSSDA-DLT 220 (409) T ss_pred CCcceEEEEEecCCceEEchhhEEEecCCCCCcccccccHHHHHHHHHHHHHHHHHHHHHHHhcCCCccEEEecCC-CCC Confidence 2 2 33332222335689999999999988777899999999999999999999999999999999999999875 689 Q ss_pred HHHHHHHHHHHHHhccccccccccccccCccccccccccccchhhHHHHHHHHHHHHHHHHHHhCCChHHhccccccccc Q lcl|Aclame:pro 231 QEDVDTLREAMKSAKGPGNFRNLFMYAPNGKKDGIQLLPVSEVAAKDEFWNIKNVTRDDQLAAHRVPPQLMGIIPNNTGG 310 (368) Q Consensus 231 ~e~~~~~k~~~~~~~g~~n~~~~~~l~~~g~~~g~~~~pl~~~~~d~qf~e~~~~~~~~Ia~~fgVPp~~lg~~~~~~~~ 310 (368) +|+++++++.|.+.. .|+|+++++ +.|++|++++++++|+||+|++++++++||++|||||++||+.++++.+ T Consensus 221 ~e~~~~~~~~~~~~~--~n~g~~~vl-----~~g~~~~~~~~~~~d~q~~e~~~~~~~~Ia~~fgVPp~~lg~~~~~~~~ 293 (409) T protein:vir:84 221 PDQVKQTQKQWIQSH--HNRRLPAVM-----SAGIKWQSVSITPNESQFLETRSFQRSEIAMWFRIPPHMIGDVEKSTSW 293 (409) T ss_pred HHHHHHHHHHHHHHh--ccCCCeeec-----CCCceEEEccCChhHHHHHHHHHHHHHHHHHHhCCCHHHhCCCCCcccc Confidence 999999999997643 578888888 6789999999999999999999999999999999999999998887778 Q ss_pred ccCHHHHHHHHHHHHHHHHHHHHH-HHHhhcCc-ceEeechhhhhcCChhhhhhhhhhcC Q lcl|Aclame:pro 311 FGDVEKAAMVFARNEVKPLQDRLL-AINDWIGD-EVVRFAPYALGGHDQPAAAPGGQRSA 368 (368) Q Consensus 311 ~sn~e~~~~~f~~~tl~P~~~~ie-~l~~~l~~-~~~~F~~~~Llr~D~~~ra~~~~~~~ 368 (368) ++|+|++.+.|+++||.||++.|| ++|++|.. .+++||.+.|+++|.++|++..+... T Consensus 294 ~sn~e~~~~~f~~~~l~P~~~~ie~~l~~~L~~g~~i~fd~~~l~~~d~~~~~~~~~~~~ 353 (409) T protein:vir:84 294 GTGIEEQGINFVRHTLLPWLRCIEQALDTFLPRGQFVKFNVDGLMRGDVTARFTAYQMGL 353 (409) T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeEEEechhhhccCHHHHHHHHHHHH Confidence 899999999999999999999998 59998865 46899999999999999998777665 No 55 >protein:vir:101647 Length: 460 # NCBI annotation: phage portal protein # Family: family:all:26542 # MgeID: mge:1646 # MgeName: 11b # Cross-refs: genbank:acc:YP_112492;genbank:gi:53793592;uniprot:Q5ZGG1;genbank:GeneID:3101755 Probab=100.00 E-value=3.1e-66 Score=379.76 Aligned_cols=353 Identities=13% Similarity=0.107 Sum_probs=265.9 Q ss_pred CCcCCCCccccccccccccccCCCcchhhccccCceEEEE----CCCc---eeccChHHHHHHHHHHhccchhcccccHH Q lcl|Aclame:pro 1 MSRNKTRRAARAASAHVRTANTDAPTEHHTDRAAQAEVFS----FGDP---VEVLDRRELLDYVECMRMGQWYEPPMPWD 73 (368) Q Consensus 1 m~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~g~p---~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 73 (368) |+..-+|.-++.+. ......+.....-+ ..++ .|.+ ...+...+|+.|+.++. ..++..|+.++ T Consensus 1 ~~~~~~~~~~~~~~------~~~~~~~~~~~~~g--~~~~~~~~~~~~~~~~~a~~~~~v~~~v~~ia-~~iA~lp~~v~ 71 (460) T protein:vir:10 1 MANRIIRALRELTG------LDNKFNDAFIKYIG--QTFTKYDNNGKTYLEQGYNINPDVYSCISQMA-AKTVAVPYTIK 71 (460) T ss_pred CchhHHHHHhhhhc------cCCCchHHHHHhhc--cccCCCccchhhhhHHHHhcchHHHHHHHHHH-HhhhhCceEEE Confidence 88665544332221 11111112211111 1111 1111 22344566666766554 56788887643 Q ss_pred HHHH-------------------HHHhcccccch--hhhccchHHhhccCCCCcCH-HHHHHHHHhHhhhCCeeEEEEec Q lcl|Aclame:pro 74 GLAR-------------------SFRAAAHHSSA--VYVKRNILVSTFIPHPLLSR-ATFERLVLDWQVFGNAYLERREN 131 (368) Q Consensus 74 ~l~~-------------------~~r~~~~~~~~--~~~~~~~~l~~~~~n~~~~~-~~~~~~~~~~ll~Gnay~~i~r~ 131 (368) .... ..+....|... ....+....+...|||+++. +||+.++.+++++||||++|+|+ T Consensus 72 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~PN~~~t~~~f~~~~~~~lll~Gnay~~i~r~ 151 (460) T protein:vir:10 72 VVKDTKAYQQLNNLNISTKGLYSFTQSLQKNRLDTKAFSETEKAFPLESPNPTQTWADIYSLYKTYMRLNGNCYFYLMSP 151 (460) T ss_pred eccCCccchhhhhhhhhhhhhHHHHHHhhcchhhhcccchhHHHHHHhCCCCCCCHHHHHHHHHHHHhhcCCeEEEEEec Confidence 1110 01111111111 11112234566689998875 78889999999999999999996 Q ss_pred C----CcceEEEEEecccccccccCCCe----------eEEEeCCceEEEEcCccEEEecCCCCc-----CCccccchhh Q lcl|Aclame:pro 132 V----LGGTIRLDTPLAKYVRRGLDLNT----------YFFVQNWQQPYTFAAGSVFHLQEPDIN-----QEVYGLPEYL 192 (368) Q Consensus 132 ~----~G~~~~L~~l~p~~v~~~~~~~~----------~~~~~~~~~~~~~~~~dviH~r~~~~~-----~~~~G~spi~ 192 (368) . .|+|++|+|++|+.|++..+.++ +|.+..+|....|+++||||||.+++. ++++|+||+. T Consensus 152 ~~~~~~G~~~~L~~l~~~~v~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~evih~r~~~~~~~~~~~~~~G~sp~~ 231 (460) T protein:vir:10 152 DDGINAGVPSQMYVLPAHLIKIVLKDDINLLSTDSPIKSYMLIQGDQFIEFNEDEVIHTKYANPNFDLQGSHLYGMSPIR 231 (460) T ss_pred CCCccCceeEEEEEEcCceEEEEEcCCCceeeeeeeeeEEEEecCceeEEecccceEEEecCCCCcccccCccccccHHH Confidence 4 47999999999999999876553 234456788899999999999987664 4689999999 Q ss_pred HHHHHHHHHHHHHHHHHHHHhccCCCceeEEeCCCCccHHHHHHHHHHHHHhc-cccccccccccccCcccccccccccc Q lcl|Aclame:pro 193 SALNATWLNESATLFRRRYYKNGSHAGFILYMTDAAQKQEDVDTLREAMKSAK-GPGNFRNLFMYAPNGKKDGIQLLPVS 271 (368) Q Consensus 193 ~a~~~i~~~~~a~~~~~~~f~ng~~p~gil~~~~~~l~~e~~~~~k~~~~~~~-g~~n~~~~~~l~~~g~~~g~~~~pl~ 271 (368) .++++|.++.++++|..++|+||+.|++|++.+ ..+++|+++++++.|++.+ |.+|+|+++++ +.|++|++++ T Consensus 232 ~~~~~i~~~~~~~~~~~~~f~ng~~~~~i~~~~-~~l~~e~~~~~~~~~~~~~~g~~n~g~~~vl-----~~g~~~~~l~ 305 (460) T protein:vir:10 232 AILRNINSQNSTIDNNVKTMQNGGVFGFIHGGS-TGLTQPQADSLKQRLTEMDKSPDRLSQIAGA-----SGEIAFTKIS 305 (460) T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCcceeeecC-CCCCHHHHHHHHHHHHHHhcCccccCCceec-----CCCceEEEcc Confidence 999999999999999999999999999998765 5799999999999998864 56899999988 6789999999 Q ss_pred chhhHHHHHHHHHHHHHHHHHHhCCChHHhcccccccccccCHHHHHHHHHHHHHHHHHHHHH-HHHhhcCcc------- Q lcl|Aclame:pro 272 EVAAKDEFWNIKNVTRDDQLAAHRVPPQLMGIIPNNTGGFGDVEKAAMVFARNEVKPLQDRLL-AINDWIGDE------- 343 (368) Q Consensus 272 ~~~~d~qf~e~~~~~~~~Ia~~fgVPp~~lg~~~~~~~~~sn~e~~~~~f~~~tl~P~~~~ie-~l~~~l~~~------- 343 (368) ++++|+||+|++++++++||++|||||++||+.++.+++|+|+|++.+.|+++||.||++.|| ++|++|.+. T Consensus 306 ~~~~d~q~~e~~~~~~~~Ia~~fgVPp~~lg~~~~~t~~~sn~e~~~~~f~~~~l~P~~~~ie~~ln~kl~~~~~~~~~~ 385 (460) T protein:vir:10 306 LNTDELKPFDYLKYDQKAICNALGWSDKLLNNNEGGGLNTGNLEEERKRVVTDNIQPDLVILKQAFDKKFIKRFKGYENA 385 (460) T ss_pred CChhHHHHHHHHHHHHHHHHHHhCCCHHHhCCCCCCCCccccHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcccccCCc Confidence 999999999999999999999999999999998887789999999999999999999999998 599887542 Q ss_pred eEeechhhh--hcCChhhhhhhhhhcC Q lcl|Aclame:pro 344 VVRFAPYAL--GGHDQPAAAPGGQRSA 368 (368) Q Consensus 344 ~~~F~~~~L--lr~D~~~ra~~~~~~~ 368 (368) +++||.+.| +++|.+++++...+.. T Consensus 386 ~i~~d~~~l~~l~~d~~~~~~~~~~g~ 412 (460) T protein:vir:10 386 VIEWDISELPEMQTDMVAMASWLNTIP 412 (460) T ss_pred eEEeecchhhhHHHHHHHHHHHHhCCC Confidence 589999888 7889999888766555 No 56 >protein:vir:93943 Length: 409 # NCBI annotation: ORF010 # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:1485 # MgeName: 3A # Cross-refs: genbank:acc:YP_239936;genbank:gi:66395598;genbank:GeneID:5131009 Probab=100.00 E-value=2.3e-65 Score=374.91 Aligned_cols=339 Identities=12% Similarity=0.135 Sum_probs=258.9 Q ss_pred CCcCC--CCccccccccccccccCCCcchhhccccCceEEEECCCceeccChHHHHHHHHHHhccchhcccccHHHHHHH Q lcl|Aclame:pro 1 MSRNK--TRRAARAASAHVRTANTDAPTEHHTDRAAQAEVFSFGDPVEVLDRRELLDYVECMRMGQWYEPPMPWDGLARS 78 (368) Q Consensus 1 m~~~k--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~ 78 (368) |+|.+ +|.|.-........ ......+...... ...+. -.+..++...+|+.|+.++. .+++..|+.+. T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~-~~~~~-v~~~~~~~~~~V~~ci~~Ia-~~ia~lp~~~~----- 70 (409) T protein:vir:93 1 MAKENIVTRIKKKLIDNWIDQ--STSKLYDFSPWKN-RSFWG-VINNTLETNETIFSAITKLS-NSMASLPLKMY----- 70 (409) T ss_pred CCccchhhhhhhhhhhhhhcc--ccccccccccccC-ccccc-cchhhhhccHHHHHHHHHHH-HhhhhCceeEe----- Confidence 99875 33333221111111 1111111111111 11111 12344566777778877665 66888887642 Q ss_pred HHhcccccchhhhccc-hHHhhccCCCCcCH-HHHHHHHHhHhhhCCeeEEEEecCCcceEEEEEecccccccccCCCe- Q lcl|Aclame:pro 79 FRAAAHHSSAVYVKRN-ILVSTFIPHPLLSR-ATFERLVLDWQVFGNAYLERRENVLGGTIRLDTPLAKYVRRGLDLNT- 155 (368) Q Consensus 79 ~r~~~~~~~~~~~~~~-~~l~~~~~n~~~~~-~~~~~~~~~~ll~Gnay~~i~r~~~G~~~~L~~l~p~~v~~~~~~~~- 155 (368) +.. ...+|+ ..++...|||+++. +||+.++.+++++||||++|.|+..|++++|+|++|++|++..+.++ T Consensus 71 -~~~------~~~~~~~~~lL~~~PN~~~t~~~f~~~~~~~lll~Gnay~~i~r~~~G~~~~L~~l~~~~v~~~~~~~~~ 143 (409) T protein:vir:93 71 -EDY------KVVNTEVSDLLTVSPNNSLSSFDFINQIETIRNEKGNAYVLIERDIYHQPSKLFLLNPDVVEMLIENQSR 143 (409) T ss_pred -ecc------ccccchHHHHHhhhcccCCCHHHHHHHHHHHHhhcCceEEEEEECCCCcEEEEEEEcCceeEEEEeCCCc Confidence 211 112344 34566789998875 78889999999999999999999999999999999999998765432 Q ss_pred --eE-EEeCCceEEEEcCccEEEecCCCCcCCccccchhhHHHHHHHHHHHHHHHHHHHHhccCCCceeEEeCCCCccHH Q lcl|Aclame:pro 156 --YF-FVQNWQQPYTFAAGSVFHLQEPDINQEVYGLPEYLSALNATWLNESATLFRRRYYKNGSHAGFILYMTDAAQKQE 232 (368) Q Consensus 156 --~~-~~~~~~~~~~~~~~dviH~r~~~~~~~~~G~spi~~a~~~i~~~~~a~~~~~~~f~ng~~p~gil~~~~~~l~~e 232 (368) +| +...+|..+.|+++||||||.+++.++++|+||+.+++++|+++.+++++. ++.++..++++++. +..+++| T Consensus 144 ~~~y~~~~~~g~~~~~~~~eVih~r~~~~~~~~~G~s~i~~~~~~i~~~~~~~~~~--~~~~~~~~~~i~~~-~~~l~~e 220 (409) T protein:vir:93 144 ELYYSIHAATGNKLIVHNMDMLHFKHIVASNMVQGISPIDVLKNTTDFDNAVRTFN--LTEMQKPDSFMLKY-GSNVGKE 220 (409) T ss_pred EEEEEEEcCCceEEEEccccEEEeCCCCCCCccccccHHHHHHHHHHHHHHHHHHH--HHhcCCCCceEEec-CCCCCHH Confidence 33 344567788999999999998877899999999999999999999999984 66666666777765 4679999 Q ss_pred HHHHHHHHHHHhccccccccccccccCccccccccccccchhhHHHHHHHHHHHHHHHHHHhCCChHHhccccccccccc Q lcl|Aclame:pro 233 DVDTLREAMKSAKGPGNFRNLFMYAPNGKKDGIQLLPVSEVAAKDEFWNIKNVTRDDQLAAHRVPPQLMGIIPNNTGGFG 312 (368) Q Consensus 233 ~~~~~k~~~~~~~g~~n~~~~~~l~~~g~~~g~~~~pl~~~~~d~qf~e~~~~~~~~Ia~~fgVPp~~lg~~~~~~~~~s 312 (368) +++++++.|++.. +|+++++++ ++|++|+|++++++|+||+|++++++++||++|||||++||... +++++ T Consensus 221 ~~~~~~~~~~~~~--~~~g~~~vl-----~~g~~~~~l~~~~~d~q~~e~r~~~~~~Ia~~fgVPp~~lg~~~--~~~~s 291 (409) T protein:vir:93 221 KRQQVLEDFKQYY--EENGGILFQ-----EPGVEIEPLPKKYVSEDIVASENLTRERVANVFQLPSVFLNARS--NTNFA 291 (409) T ss_pred HHHHHHHHHHHHh--hcCCCeeec-----CCCceEEEcCCChhHHHHHHHHHHHHHHHHHHhCCCHHHhCCCC--CCCcc Confidence 9999999998765 367788887 67899999999999999999999999999999999999999754 47999 Q ss_pred CHHHHHHHHHHHHHHHHHHHHH-HHHhhcCc-------ceEeechhhhhcCChhhhhhhhhhcC Q lcl|Aclame:pro 313 DVEKAAMVFARNEVKPLQDRLL-AINDWIGD-------EVVRFAPYALGGHDQPAAAPGGQRSA 368 (368) Q Consensus 313 n~e~~~~~f~~~tl~P~~~~ie-~l~~~l~~-------~~~~F~~~~Llr~D~~~ra~~~~~~~ 368 (368) |+|++.+.|+++||.||++.|| ++|++|.+ .+|+||.++|+++|.++|++..++.- T Consensus 292 n~e~~~~~f~~~~l~P~~~~ie~~l~~~Ll~~~~~~~~~~~~fd~~~ll~~d~~~~~~~~~~~~ 355 (409) T protein:vir:93 292 KNEELNRFYLQHTLLPIVKQYEEEFNRKLLTKTDREKNRYFKFNVKSYLRADSATQAEVYFKAV 355 (409) T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcccccCcceEEeechhhhccCHHHHHHHHHHHH Confidence 9999999999999999999998 59988753 25899999999999999999776654 No 57 >protein:vir:94426 Length: 409 # NCBI annotation: ORF009 # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:1506 # MgeName: 47 # Cross-refs: genbank:acc:YP_240003;genbank:gi:66395665;genbank:GeneID:5133086 Probab=100.00 E-value=2.8e-65 Score=374.45 Aligned_cols=339 Identities=12% Similarity=0.135 Sum_probs=257.3 Q ss_pred CCcCC--CCccccccccccccccCCCcchhhccccCceEEEECCCceeccChHHHHHHHHHHhccchhcccccHHHHHHH Q lcl|Aclame:pro 1 MSRNK--TRRAARAASAHVRTANTDAPTEHHTDRAAQAEVFSFGDPVEVLDRRELLDYVECMRMGQWYEPPMPWDGLARS 78 (368) Q Consensus 1 m~~~k--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~ 78 (368) |||.+ +|.|...-........+.. .+..... ..+.+. -.+...+...+|+.|+.++. ++++..|+.+. T Consensus 1 ~~~~~~~~~~k~~~~~~~~~~~~~~~--~~~~~~~-~~~~~~-v~~~~a~~~~~v~~~i~~Ia-~~ia~lp~~~~----- 70 (409) T protein:vir:94 1 MAKENIVTRIKKKLIDNWIDQSASKL--YDFSPWK-NKSFWG-VINNTLETNETIFSAITKLS-NSMASLPLKMY----- 70 (409) T ss_pred CcccccchhhhhHHhhhhhcCCcccc--ccccccc-Cccccc-cchhhhhccHHHHHHHHHHH-HhhhhCceeEe----- Confidence 99764 3333322111111111110 0111100 011111 11233556677777777654 66888887542 Q ss_pred HHhcccccchhhhccc-hHHhhccCCCCcCH-HHHHHHHHhHhhhCCeeEEEEecCCcceEEEEEecccccccccCCCe- Q lcl|Aclame:pro 79 FRAAAHHSSAVYVKRN-ILVSTFIPHPLLSR-ATFERLVLDWQVFGNAYLERRENVLGGTIRLDTPLAKYVRRGLDLNT- 155 (368) Q Consensus 79 ~r~~~~~~~~~~~~~~-~~l~~~~~n~~~~~-~~~~~~~~~~ll~Gnay~~i~r~~~G~~~~L~~l~p~~v~~~~~~~~- 155 (368) +... ..+|+ ..++...||++++. +||+.++.+++++||+|++|.|+..|+|++|+|++|++|++..+.++ T Consensus 71 -~~~~------~~~~~~~~lL~~~PN~~~t~~~f~~~~~~~lll~Gnay~~i~r~~~G~~~~L~~l~~~~v~v~~~~~~~ 143 (409) T protein:vir:94 71 -EDYK------VVNTEVSDLLTVSPNNSLSSFDFINQIETIRNEKGNAYVLIERDIYHQPSKLFLLNPDVVEMLIENQSR 143 (409) T ss_pred -eccc------ccchhHHHHHhhhcccCCCHHHHHHHHHHHHhhcCCeEEEEEECCCCcEEEEEEEcCceeEEEEeCCCc Confidence 2111 12344 33566689998875 78889999999999999999999999999999999999988765432 Q ss_pred --eEE-EeCCceEEEEcCccEEEecCCCCcCCccccchhhHHHHHHHHHHHHHHHHHHHHhccCCCceeEEeCCCCccHH Q lcl|Aclame:pro 156 --YFF-VQNWQQPYTFAAGSVFHLQEPDINQEVYGLPEYLSALNATWLNESATLFRRRYYKNGSHAGFILYMTDAAQKQE 232 (368) Q Consensus 156 --~~~-~~~~~~~~~~~~~dviH~r~~~~~~~~~G~spi~~a~~~i~~~~~a~~~~~~~f~ng~~p~gil~~~~~~l~~e 232 (368) +|. ...+|..+.|+++||||||.+++.++++|+||+.+++.+++++.+++++. ++.++..++++++. +..+++| T Consensus 144 ~~~y~~~~~~g~~~~~~~~dvih~r~~~~~~~~~G~s~l~~~~~~i~~~~~~~~~~--~~~~~~~~~~i~~~-~~~l~~e 220 (409) T protein:vir:94 144 ELYYSIHAATGNKLIVHNMDMLHFKHIVASNMVQGISPIDVLKNTTDFDNAVRTFN--LTEMQKPDSFMLKY-GSNVGKE 220 (409) T ss_pred EEEEEEEcCCceEEEEccccEEEecCCCCCCccccccHHHHHHHHHHHHHHHHHHH--HHhcCCCCeeEEec-CCCCCHH Confidence 333 34567788999999999998878899999999999999999999999984 56666666777765 4579999 Q ss_pred HHHHHHHHHHHhccccccccccccccCccccccccccccchhhHHHHHHHHHHHHHHHHHHhCCChHHhccccccccccc Q lcl|Aclame:pro 233 DVDTLREAMKSAKGPGNFRNLFMYAPNGKKDGIQLLPVSEVAAKDEFWNIKNVTRDDQLAAHRVPPQLMGIIPNNTGGFG 312 (368) Q Consensus 233 ~~~~~k~~~~~~~g~~n~~~~~~l~~~g~~~g~~~~pl~~~~~d~qf~e~~~~~~~~Ia~~fgVPp~~lg~~~~~~~~~s 312 (368) +++++++.|++.+ +|+++++++ ++|++|+|++++++|+||+|++++++++||++|||||++||... .++|+ T Consensus 221 ~~~~~~~~~~~~~--~~~g~~~vl-----~~g~~~~~l~~~~~d~q~~e~~~~~~~~Ia~~fgVPp~~lg~~~--~~~~s 291 (409) T protein:vir:94 221 KRQQVLEDFKQYY--EENGGILFQ-----EPGVEIEPLPKKYVSEDIVASENLTRERVANVFQLPSVFLNARS--NTNFA 291 (409) T ss_pred HHHHHHHHHHHHh--hcCCCeeec-----CCCceEEEcCCChhHHHHHHHHHHHHHHHHHHhCCCHHHhCCCC--CCCcc Confidence 9999999998865 367888887 67899999999999999999999999999999999999999754 37999 Q ss_pred CHHHHHHHHHHHHHHHHHHHHH-HHHhhcCc-------ceEeechhhhhcCChhhhhhhhhhcC Q lcl|Aclame:pro 313 DVEKAAMVFARNEVKPLQDRLL-AINDWIGD-------EVVRFAPYALGGHDQPAAAPGGQRSA 368 (368) Q Consensus 313 n~e~~~~~f~~~tl~P~~~~ie-~l~~~l~~-------~~~~F~~~~Llr~D~~~ra~~~~~~~ 368 (368) |+|++.+.|+++||.|+++.|| ++|++|.+ .+|+||.++|+++|.++|++..++.- T Consensus 292 n~e~~~~~f~~~~l~P~~~~ie~~ln~~Ll~~~~~~~~~~i~fd~~~ll~~d~~~~~~~~~~~~ 355 (409) T protein:vir:94 292 KNEELNRFYLQHTLLPIVKQYEEEFNRKLLTKTDREKNRYFKFNVKSYLRADSATQAEVYFKAV 355 (409) T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCcccccCcceEEeechhhhccCHHHHHHHHHHHH Confidence 9999999999999999999998 59998753 35999999999999999999877653 No 58 >protein:vir:96980 Length: 409 # NCBI annotation: ORF008 # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:1643 # MgeName: 42e # Cross-refs: genbank:acc:YP_239857;genbank:gi:66395516;genbank:GeneID:5133013 Probab=100.00 E-value=7.9e-65 Score=372.02 Aligned_cols=338 Identities=12% Similarity=0.136 Sum_probs=257.6 Q ss_pred CCcCC--CCcccc-ccccccccccCCCcchhhccccCceEEEECCCceeccChHHHHHHHHHHhccchhcccccHHHHHH Q lcl|Aclame:pro 1 MSRNK--TRRAAR-AASAHVRTANTDAPTEHHTDRAAQAEVFSFGDPVEVLDRRELLDYVECMRMGQWYEPPMPWDGLAR 77 (368) Q Consensus 1 m~~~k--~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~ 77 (368) |+|-+ +|.|.. ..+...++.. .. -+.....+ .+.+. -.+..++...+|+.|+.++. .+++..|+.++ T Consensus 1 ~~~~~~~~~~k~~~~~~~~~~~~~-~~--~~~~~~~~-~~~~~-v~~~~a~~~~~V~~ci~~ia-~~ia~lp~~~~---- 70 (409) T protein:vir:96 1 MAKENIVTRIKKKLIDNWIDQSAS-KL--YDFSPWKN-KSFWG-VINNTLETNETIFSAITKLS-NSMASLPLKMY---- 70 (409) T ss_pred CccccchhhhhhHHhhhhhccccc-cc--cccccccC-ccccc-cchhhHhhhHHHHHHHHHHH-HhhhhCceEEe---- Confidence 98775 333332 2222222111 10 01111111 11111 11334566677777777654 66888887542 Q ss_pred HHHhcccccchhhhccc-hHHhhccCCCCcCH-HHHHHHHHhHhhhCCeeEEEEecCCcceEEEEEecccccccccCCCe Q lcl|Aclame:pro 78 SFRAAAHHSSAVYVKRN-ILVSTFIPHPLLSR-ATFERLVLDWQVFGNAYLERRENVLGGTIRLDTPLAKYVRRGLDLNT 155 (368) Q Consensus 78 ~~r~~~~~~~~~~~~~~-~~l~~~~~n~~~~~-~~~~~~~~~~ll~Gnay~~i~r~~~G~~~~L~~l~p~~v~~~~~~~~ 155 (368) +... ..+|+ ..++...|||+++. +||+.++.+++++||||++|.|+..|+|++|+|++|.+|++..+.+. T Consensus 71 --~~~~------~~~~~l~~lL~~~PN~~~t~~~f~~~~~~~lll~Gnay~~i~r~~~G~~~~L~~l~~~~v~v~~~~~~ 142 (409) T protein:vir:96 71 --EDYK------VVNTEVSDLLTVSPNNSLSSFDFINQIETIRNEKGNAYVLIERDIYHQPSKLFLLNPDVVEMLIENQS 142 (409) T ss_pred --eccc------ccchhHHHHHhhhcccCCCHHHHHHHHHHHHhhcCceEEEEEECCCCcEEEEEEEcCceeEEEEeCCC Confidence 2111 12344 34566789998875 78899999999999999999999999999999999999998765442 Q ss_pred ---eE-EEeCCceEEEEcCccEEEecCCCCcCCccccchhhHHHHHHHHHHHHHHHHHHHHhccCCCceeEEeCCCCccH Q lcl|Aclame:pro 156 ---YF-FVQNWQQPYTFAAGSVFHLQEPDINQEVYGLPEYLSALNATWLNESATLFRRRYYKNGSHAGFILYMTDAAQKQ 231 (368) Q Consensus 156 ---~~-~~~~~~~~~~~~~~dviH~r~~~~~~~~~G~spi~~a~~~i~~~~~a~~~~~~~f~ng~~p~gil~~~~~~l~~ 231 (368) +| +...+|+.+.|+++||||||.+++.++++|+||+..++.++.++.+++++. ++.++..++++++. +..+++ T Consensus 143 ~~~~y~~~~~~g~~~~~~~~evih~r~~~~~~~~~G~s~l~~~~~~i~~~~~~~~~~--~~~~~~~~~~i~~~-~~~l~~ 219 (409) T protein:vir:96 143 RELYYSIHAATGNKLIVHNMDMLHFKHIVASNMVQGISPIDVLKNTTDFDNAVRTFN--LTEMQKPDSFMLKY-GSNVST 219 (409) T ss_pred cEEEEEEEcCCceEEEEccccEEEeCCCCCCCccccccHHHHHHHHHHHHHHHHHHH--HHhcCCCceeEEec-CCCCCH Confidence 33 344567888999999999998877899999999999999999999998874 55555555556654 567999 Q ss_pred HHHHHHHHHHHHhccccccccccccccCccccccccccccchhhHHHHHHHHHHHHHHHHHHhCCChHHhcccccccccc Q lcl|Aclame:pro 232 EDVDTLREAMKSAKGPGNFRNLFMYAPNGKKDGIQLLPVSEVAAKDEFWNIKNVTRDDQLAAHRVPPQLMGIIPNNTGGF 311 (368) Q Consensus 232 e~~~~~k~~~~~~~g~~n~~~~~~l~~~g~~~g~~~~pl~~~~~d~qf~e~~~~~~~~Ia~~fgVPp~~lg~~~~~~~~~ 311 (368) |+++++++.|++.+ +|+|+++++ +.|++|+|++++++|+||+|++++++++||++|||||++||...+ ++| T Consensus 220 e~~~~~~~~~~~~~--~n~g~~~vl-----~~g~~~~~l~~~~~d~q~~e~~~~~~~~Ia~~fgVPp~~lg~~~~--~~~ 290 (409) T protein:vir:96 220 EKRQQVLEDFKQYY--EENGGILFQ-----EPGVEIEPLPKKYVSEDIVASENLTRERVANVFQLPSIFLNARSN--TNF 290 (409) T ss_pred HHHHHHHHHHHHHh--hcCCCeeec-----CCCceEEEcCCChhHHHHHHHHHHHHHHHHHHhCCCHHHhCCCCC--CCc Confidence 99999999998765 467888887 678999999999999999999999999999999999999997543 699 Q ss_pred cCHHHHHHHHHHHHHHHHHHHHH-HHHhhcCc-------ceEeechhhhhcCChhhhhhhhhhcC Q lcl|Aclame:pro 312 GDVEKAAMVFARNEVKPLQDRLL-AINDWIGD-------EVVRFAPYALGGHDQPAAAPGGQRSA 368 (368) Q Consensus 312 sn~e~~~~~f~~~tl~P~~~~ie-~l~~~l~~-------~~~~F~~~~Llr~D~~~ra~~~~~~~ 368 (368) +|+|++.+.|+++||.|+++.|| ++|++|.+ .+++||.++|+++|.++|++..++.- T Consensus 291 s~~e~~~~~f~~~~l~P~~~~ie~~l~~~Ll~~~~~~~g~~i~fd~~~ll~~d~~~~~e~~~~~~ 355 (409) T protein:vir:96 291 AKNEELNRFYLQHTLLPIVKQYEEEFNRKLLTKTDREKNRYFKFNVKSYLRADSATQAEVYFKAV 355 (409) T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcccccCcceEEeechhhhccCHHHHHHHHHHHH Confidence 99999999999999999999998 59988753 35899999999999999999877664 No 59 >protein:vir:9702 Length: 406 # NCBI annotation: hypothetical protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:174 # MgeName: 315.2 # Cross-refs: genbank:acc:NP_795464;genbank:gi:28876227;genbank:GeneID:1257772 Probab=100.00 E-value=1.7e-64 Score=370.15 Aligned_cols=334 Identities=11% Similarity=0.091 Sum_probs=259.2 Q ss_pred CCcCCCCccccccccccccccCCCcchhhccccCceEEEECCCceeccChHHHHHHHHHHhccchhcccccHHHHHHHHH Q lcl|Aclame:pro 1 MSRNKTRRAARAASAHVRTANTDAPTEHHTDRAAQAEVFSFGDPVEVLDRRELLDYVECMRMGQWYEPPMPWDGLARSFR 80 (368) Q Consensus 1 m~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~r 80 (368) ||..+.+..+..+. .+. ......... .... ..++++...+|+.|+.++. ..++..|+.. .+ T Consensus 1 m~~f~~~~~~~~~~-------~~~-~~~~~~~~~-~~~~---~~~~Al~~~~V~~~i~~Ia-~~iA~lp~~~------~~ 61 (406) T protein:vir:97 1 MSFFQPLGTSKVSY-------DDY-ISSVLAGDV-SQKY---LGVSALKNSDILTATSIIA-GDIARFPLVK------KD 61 (406) T ss_pred CccccccCCCCCCc-------chH-HHHHhcCCC-Cccc---ccchhhccHHHHHHHHHHH-HhhhhCeeEE------Ee Confidence 99888654442211 111 111111111 1111 2334567777877777654 4677777531 22 Q ss_pred hcccccchhhhccch-HHhhccCCCCcCH-HHHHHHHHhHhhhCCeeEEEEecC-CcceEEEEEecccccccccCCC--e Q lcl|Aclame:pro 81 AAAHHSSAVYVKRNI-LVSTFIPHPLLSR-ATFERLVLDWQVFGNAYLERRENV-LGGTIRLDTPLAKYVRRGLDLN--T 155 (368) Q Consensus 81 ~~~~~~~~~~~~~~~-~l~~~~~n~~~~~-~~~~~~~~~~ll~Gnay~~i~r~~-~G~~~~L~~l~p~~v~~~~~~~--~ 155 (368) .++ .+..+|+. .++...|||+++. +||+.++.++++.||||++|.|++ .|++.+|+|++|+.|++....+ . T Consensus 62 ~~g----~~~~~~~~~~lL~~~PN~~~t~~~f~~~~~~~l~l~Gnay~~i~r~~~~g~~~~L~~i~p~~v~v~~~~~~~~ 137 (406) T protein:vir:97 62 VNG----DIIHDEDINYLLNVKSTSNASARTWKFAMAVNAILTGNSFSRILRDPKTNQALQFQFYRPSETTVEETDNHEI 137 (406) T ss_pred cCc----cccccchHHHHhhccCCCCCCHHHHHHHHHHHHhhcCCeEEEEEecCCCCeEEEEEEECCCeeEEEEcCCceE Confidence 221 23345653 4455789998875 788899999999999999999985 6899999999999999876544 3 Q ss_pred eEEEe--CCceEEEEcCccEEEecCCCCcCCccccchhhHHHHHHHHHHHHHHHHHHHHhccCCCceeEEeCCCCccHHH Q lcl|Aclame:pro 156 YFFVQ--NWQQPYTFAAGSVFHLQEPDINQEVYGLPEYLSALNATWLNESATLFRRRYYKNGSHAGFILYMTDAAQKQED 233 (368) Q Consensus 156 ~~~~~--~~~~~~~~~~~dviH~r~~~~~~~~~G~spi~~a~~~i~~~~~a~~~~~~~f~ng~~p~gil~~~~~~l~~e~ 233 (368) +|.+. .++....++++||||||.++ .++++|+||+.+++++|.++.++++|..++|+||+.|++++.. +..+++++ T Consensus 138 ~y~~~~~~~~~~~~~~~~evih~r~~~-~dg~~G~spi~~~~~~i~~~~a~~~~~~~~f~ng~~~~~i~~~-~~~l~~e~ 215 (406) T protein:vir:97 138 VYTFTDMLTAKQVKCFAHDVIHWKFFS-HDTILGRSPLLSLGDEIDLQTGGINTLIKFFKDGFSSGILTMK-GAQLSGDA 215 (406) T ss_pred EEEEEecCCceEEEEccccEEEecCCC-CCCcccccHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEec-CCCCCHHH Confidence 44443 46778899999999999875 5789999999999999999999999999999999998877764 56799999 Q ss_pred HHHHHHHHHHhccccccccccccccCccccccccccccchhhHHHHHHHHHHHHHHHHHHhCCChHHhcccccccccccC Q lcl|Aclame:pro 234 VDTLREAMKSAKGPGNFRNLFMYAPNGKKDGIQLLPVSEVAAKDEFWNIKNVTRDDQLAAHRVPPQLMGIIPNNTGGFGD 313 (368) Q Consensus 234 ~~~~k~~~~~~~g~~n~~~~~~l~~~g~~~g~~~~pl~~~~~d~qf~e~~~~~~~~Ia~~fgVPp~~lg~~~~~~~~~sn 313 (368) ++++++.|++.+++.|+|+++++ +.|++|+||+++++|+||+|++++++++||++|||||++||. +++++| T Consensus 216 ~~~~~~~~~~~~~g~n~g~~~vl-----~~g~~~~~l~~~~~d~q~le~~~~~~~~Ia~afgVPp~~lg~----~~~~~~ 286 (406) T protein:vir:97 216 RQRARQEFEKMREGSVGGSPLVF-----DSTMEYTPLEIDTNVLQLITSNNFSTAQIAKALRVPSYKLGV----NSPNQS 286 (406) T ss_pred HHHHHHHHHHHhcccccCceeec-----CCCceEEEccCCHHHHHHHHHHHhhHHHHHHHhCCCHHHcCC----CCCcch Confidence 99999999998888999999988 678999999999999999999999999999999999999985 357889 Q ss_pred HHHHHHHHHHHHHHHHHHHHH-HHHhhcCcc------eEeechhhhhcCChhhhhhhhhhcC Q lcl|Aclame:pro 314 VEKAAMVFARNEVKPLQDRLL-AINDWIGDE------VVRFAPYALGGHDQPAAAPGGQRSA 368 (368) Q Consensus 314 ~e~~~~~f~~~tl~P~~~~ie-~l~~~l~~~------~~~F~~~~Llr~D~~~ra~~~~~~~ 368 (368) ++++.+.|+++||.||++.|| +++++|.+. +++||..++++.|.++.+....+.. T Consensus 287 ~e~~~~~f~~~~l~P~~~~ie~~l~~kll~~~~~~~~~i~fd~~~~~~~~~~~~~~~~~~g~ 348 (406) T protein:vir:97 287 VAQLMEDYVTNDLPFYFDAITSELGLKTLNDKDRRLYHIEFDTRSVTGRNVDEIVKLVNNQI 348 (406) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhhcChhhccceeEEEecCccchhhHHHHHHHHhCCC Confidence 999999999999999999998 488877532 5899988887777666655444433 No 60 >protein:vir:1082 Length: 359 # NCBI annotation: portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:21 # MgeName: bIL309 # Cross-refs: genbank:acc:NP_076736;genbank:gi:13095846;genbank:GeneID:920394 Probab=100.00 E-value=1e-64 Score=371.35 Aligned_cols=334 Identities=13% Similarity=0.105 Sum_probs=250.7 Q ss_pred CCcCCCCccccccccccccccCCCcchhhccccCceEEEECCCceeccChHHHHHHHHHHhccchhcccccHHHHHHHHH Q lcl|Aclame:pro 1 MSRNKTRRAARAASAHVRTANTDAPTEHHTDRAAQAEVFSFGDPVEVLDRRELLDYVECMRMGQWYEPPMPWDGLARSFR 80 (368) Q Consensus 1 m~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~r 80 (368) ||+...++ +|-. .++.+... .....++...-..-.+.+++...+|++|+.++. ++++..|+. T Consensus 1 M~~~~~f~-~r~~-----~~~~~~~~--~~~~~~~~~~~~~v~~~~al~~~av~~cv~~ia-~~ia~~p~~--------- 62 (359) T protein:vir:10 1 MSILNPFE-RRSS-----ITPNNYYP--FMVQNGSIVPNSLVDATEALKNSDLYAVTSLIS-SDIAGTRFI--------- 62 (359) T ss_pred Ccccchhh-cccc-----CCCCcchh--hhhccccccCCcccCHHHhhcchHHHHHHHHHH-HhhhcCccc--------- Confidence 99875332 2211 11111111 111111111001112444566667777766554 456666641 Q ss_pred hcccccchhhhccchHHhhccCCCCcCH-HHHHHHHHhHhhhCCeeEEEEecCCcceEEEEEecccccccccCCCe-eEE Q lcl|Aclame:pro 81 AAAHHSSAVYVKRNILVSTFIPHPLLSR-ATFERLVLDWQVFGNAYLERRENVLGGTIRLDTPLAKYVRRGLDLNT-YFF 158 (368) Q Consensus 81 ~~~~~~~~~~~~~~~~l~~~~~n~~~~~-~~~~~~~~~~ll~Gnay~~i~r~~~G~~~~L~~l~p~~v~~~~~~~~-~~~ 158 (368) ..+...++...|||+++. +||+.++.+++++||||++|+|+..|+|++|+|++|+.|++....+. +|. T Consensus 63 ----------~~~~~~~L~~~PN~~~t~~~f~~~~~~~lll~Gnay~~i~r~~~g~~~~l~~l~~~~v~i~~~~~~~~y~ 132 (359) T protein:vir:10 63 ----------GNQVFTSVLNNPSHLTNAFSFWQTAILNLLLNGNVFLAILKGDNSLMKELRLIPSNAITIDLTDDTLTYE 132 (359) T ss_pred ----------cchHHHHHhhcccccCCHHHHHHHHHHhccccCceEEEEEECCCCeEEEEEEeCCceEEEEEcCCeEEEE Confidence 234456677889998775 78899999999999999999999999999999999999998766554 344 Q ss_pred Ee--CCceEEEEcCccEEEecCCCC----cCCccccchhhHHHHHHHHHHHHHHHHHHHHhccCCCceeEEeCCCCccHH Q lcl|Aclame:pro 159 VQ--NWQQPYTFAAGSVFHLQEPDI----NQEVYGLPEYLSALNATWLNESATLFRRRYYKNGSHAGFILYMTDAAQKQE 232 (368) Q Consensus 159 ~~--~~~~~~~~~~~dviH~r~~~~----~~~~~G~spi~~a~~~i~~~~~a~~~~~~~f~ng~~p~gil~~~~~~l~~e 232 (368) +. .++....++++||||||.++. .++++|+||+.+++.+|+++.++++|..++|+||++|+|||++++..+++| T Consensus 133 ~~~~~~~~~~~~~~~evih~~~~~~~~~~~dg~~G~spi~~~~~~i~~~~~~~~~~~~~f~ng~~~~gil~~~~~~l~~e 212 (359) T protein:vir:10 133 VNQFDDYPSAKYNASEMIHVKIMAYGVDTLHNLVGHSPLESLTSEIGQQKEANRLSLSTLKGALNPTSVVKVPQGTLSSE 212 (359) T ss_pred EEecCCceEEEEcccceEEeccCCCCCCccCccccccHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEeCCCCCCHH Confidence 33 457788999999999997653 478999999999999999999999999999999999999999987679999 Q ss_pred HHHHHHHHHHHhccccccccccccccCccccccccccccchhhHHHHHHHHHHHHHHHHHHhCCChHHhccccccccccc Q lcl|Aclame:pro 233 DVDTLREAMKSAKGPGNFRNLFMYAPNGKKDGIQLLPVSEVAAKDEFWNIKNVTRDDQLAAHRVPPQLMGIIPNNTGGFG 312 (368) Q Consensus 233 ~~~~~k~~~~~~~g~~n~~~~~~l~~~g~~~g~~~~pl~~~~~d~qf~e~~~~~~~~Ia~~fgVPp~~lg~~~~~~~~~s 312 (368) +++++++.|++.+|++|+|++++| ++|++|+|++++++|+||+|++++++++||++|||||++||...+.+++++ T Consensus 213 ~~~~~~~~~~~~~~~~n~g~~~vl-----~~g~~~~~l~~~~~d~q~le~~~~~~~~Ia~~fgVPp~~lg~~~~~~~~~~ 287 (359) T protein:vir:10 213 AKDSIRKEFEKANGGNNSGRVMVL-----DQSADFSTVSINADVANYLNSMNWGRTQIAKAFGVSDSYLNGTGDQQSSLD 287 (359) T ss_pred HHHHHHHHHHHHhCccccCCceec-----CCCcceeeecCCHHHHHHHHHHHHHHHHHHHHhCCCHHHhCCCCcccccHH Confidence 999999999999999999999998 678999999999999999999999999999999999999998777778999 Q ss_pred CHHHHHHHHHHHHHHHHHHHHHH-HHhhcCcc---eEeechhhhhcCChhhhhhh------hhhcC Q lcl|Aclame:pro 313 DVEKAAMVFARNEVKPLQDRLLA-INDWIGDE---VVRFAPYALGGHDQPAAAPG------GQRSA 368 (368) Q Consensus 313 n~e~~~~~f~~~tl~P~~~~ie~-l~~~l~~~---~~~F~~~~Llr~D~~~ra~~------~~~~~ 368 (368) +++++...|+..+|.||.+.|++ +++.+..+ +++|+. +++++|.++.... +.|+- T Consensus 288 ~~e~~~~~~l~~~l~p~~~~l~~~l~~~~~~~~~~~~~~d~-~~~~~~~~~~~~~G~~t~NE~R~~ 352 (359) T protein:vir:10 288 QIKDLYVNALNRFIEPLISELRIKCDSSIGVDMSPITDYSN-SVFKADILNWVKEGIIEPTEAKTL 352 (359) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhhhcccchhhhhcCH-HHHHHHHHHHHhCCCcCHHHHHHH Confidence 99999999999999999998884 76654321 234442 3334433321110 00000 No 61 >protein:vir:3868 Length: 417 # NCBI annotation: putative portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:82 # MgeName: A2 # Cross-refs: genbank:acc:NP_680485;swissprot:trembl:q8ltc2;genbank:gi:22296525;interpro:IPR006427;interpro:IPR006944;uniprot:Q8LTC2;genbank:GeneID:951699 Probab=100.00 E-value=1.5e-64 Score=370.45 Aligned_cols=335 Identities=14% Similarity=0.114 Sum_probs=250.8 Q ss_pred CCcCCCCccccccccccccccCCCcchhhccccCceEEEECCCc--eeccChHHHHHHHHHHhccchhcccccHHHHHHH Q lcl|Aclame:pro 1 MSRNKTRRAARAASAHVRTANTDAPTEHHTDRAAQAEVFSFGDP--VEVLDRRELLDYVECMRMGQWYEPPMPWDGLARS 78 (368) Q Consensus 1 m~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~p--~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~ 78 (368) |+-.|.+..-.... + .. .....+....+ .|.. ...+...+|+.|+.++. ..++..|+.+. T Consensus 1 m~~~~~~~~~~~~~----~--~~-----~~~~~~~~~~~-~g~~~~~~Al~~~~V~~cv~~ia-~~iA~lp~~~~----- 62 (417) T protein:vir:38 1 MKLFRGLATEVDPH----W--AD-----HLLDSGVIPSF-RGGYLGISALRNSDVLTAVSIVS-GDVSRFPLVIT----- 62 (417) T ss_pred CccccccccCCCcc----c--hh-----hhccccccccc-CCceechhhcccHHHHHHHHHHH-HhhccCeeEEE----- Confidence 88654322111110 1 01 00001111111 1111 23455666777766554 56777786532 Q ss_pred HHhcccccchhhhccc-hHHhhccCCCCcCH-HHHHHHHHhHhhhCCeeEEEEecCC-cceEEEEEecccccccccCCC- Q lcl|Aclame:pro 79 FRAAAHHSSAVYVKRN-ILVSTFIPHPLLSR-ATFERLVLDWQVFGNAYLERRENVL-GGTIRLDTPLAKYVRRGLDLN- 154 (368) Q Consensus 79 ~r~~~~~~~~~~~~~~-~~l~~~~~n~~~~~-~~~~~~~~~~ll~Gnay~~i~r~~~-G~~~~L~~l~p~~v~~~~~~~- 154 (368) +...+ + ....|+ ..++...|||+++. +|++.++.+++++||+|++|+|+.. |.|.+|+|++|+.|++....+ T Consensus 63 -~~~~~-~--~~~~~~~~~lL~~~PN~~~t~~~f~~~~~~~lll~Gn~y~~i~r~~~g~~~~~l~~l~p~~v~v~~~~~~ 138 (417) T protein:vir:38 63 -DSSTD-E--VIDLANIEYLMNTKVNKRLSAYQWKFPMMVNAILTGNAYSRIVRDPITNEPAMFEFYAPSQTQVDTSDPD 138 (417) T ss_pred -EcCCc-c--eeccchHHHHHhcccCcCCCHHHHHHHHHHHHhhcCCeEEEEEEcCCCCEEEEEEEeCCceEEEEEcCCC Confidence 22211 1 122334 34555789998875 7888999999999999999999864 679999999999998865433 Q ss_pred -eeEEEe--CCceEEEEcCccEEEecCCCCcCCccccchhhHHHHHHHHHHHHHHHHHHHHhccCCCceeEEeCCCCccH Q lcl|Aclame:pro 155 -TYFFVQ--NWQQPYTFAAGSVFHLQEPDINQEVYGLPEYLSALNATWLNESATLFRRRYYKNGSHAGFILYMTDAAQKQ 231 (368) Q Consensus 155 -~~~~~~--~~~~~~~~~~~dviH~r~~~~~~~~~G~spi~~a~~~i~~~~~a~~~~~~~f~ng~~p~gil~~~~~~l~~ 231 (368) .+|.+. .++....++++||||||.++ .++++|+||+.+++++|.++.++++|+.++|+||++|++||+.++ .+++ T Consensus 139 ~~~y~~~~~~~~~~~~~~~~dviH~r~~~-~d~~~G~s~l~~~~~~i~~~~~~~~~~~~~f~ng~~p~~il~~~~-~l~~ 216 (417) T protein:vir:38 139 NIIYRFTPYNSSMQKVCGFEDVIHWKFFS-YDTIMGRSPLLSLGDEIGLQESGVSTLQKFFKSGLKGSIIKAKES-RLSA 216 (417) T ss_pred eEEEEEEEcCCcEEEEecCcceEEecCCC-CCCccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCCcEEEEeCC-CCCH Confidence 334332 34556779999999999876 578999999999999999999999999999999999999999765 6899 Q ss_pred HHHHHHHHHHHHhccccccccccccccCccccccccccccchhhHHHHHHHHHHHHHHHHHHhCCChHHhcccccccccc Q lcl|Aclame:pro 232 EDVDTLREAMKSAKGPGNFRNLFMYAPNGKKDGIQLLPVSEVAAKDEFWNIKNVTRDDQLAAHRVPPQLMGIIPNNTGGF 311 (368) Q Consensus 232 e~~~~~k~~~~~~~g~~n~~~~~~l~~~g~~~g~~~~pl~~~~~d~qf~e~~~~~~~~Ia~~fgVPp~~lg~~~~~~~~~ 311 (368) ++.+++++.|++.+++.|+|+++++ +.|++|+|++++++|+||+|.+++++++||++|||||++||. ++++ T Consensus 217 e~~~~~~~~~~~~~~g~n~g~~~vl-----~~g~~~~~l~~~~~d~q~le~~~~~~~~Ia~~fgVPp~~lg~----~~~~ 287 (417) T protein:vir:38 217 EARQKIREDFERAQAGADAGSPIIV-----DATMDYQPLEVDTNVLNLINSNNYSTAQIAKALRVPAYRLAQ----NSPN 287 (417) T ss_pred HHHHHHHHHHHHHhcccccCCceec-----cCCceEEEccCCHHHHHHHHHHHhhHHHHHHHhCCCHHHhCC----CCcc Confidence 9999999999998888899999998 578999999999999999999999999999999999999984 3689 Q ss_pred cCHHHHHHHHHHHHHHHHHHHHH-HHHhhcCcc------eEeechhhhhcCChhhhhhhhhhcC Q lcl|Aclame:pro 312 GDVEKAAMVFARNEVKPLQDRLL-AINDWIGDE------VVRFAPYALGGHDQPAAAPGGQRSA 368 (368) Q Consensus 312 sn~e~~~~~f~~~tl~P~~~~ie-~l~~~l~~~------~~~F~~~~Llr~D~~~ra~~~~~~~ 368 (368) +|+|++.+.|+++||.||++.|| ++|++|.+. +++||.+.|.+.+..+-+...++.. T Consensus 288 s~~e~~~~~~~~~tl~P~~~~ie~~l~~~Ll~~~~~~~~~~~fd~~~l~~~~~~~~~~~~~~G~ 351 (417) T protein:vir:38 288 QSVKQLADDYIRNDLPFYFEPITSEFELKLLDDAQRHQYCIGFDTKSVNGLPIADVNTAVNGGL 351 (417) T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcChhhcccceEEechhhhhHHHHHHHHHHHhCCC Confidence 99999999999999999999998 599877532 5899998887766543322222222 No 62 >protein:vir:2683 Length: 412 # NCBI annotation: portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:57 # MgeName: phiSLT # Cross-refs: genbank:acc:NP_075502;genbank:gi:12719431;genbank:GeneID:920150 Probab=100.00 E-value=1.3e-63 Score=365.43 Aligned_cols=341 Identities=12% Similarity=0.124 Sum_probs=254.0 Q ss_pred CCcC-CCCcccccccccc-cc-ccCCCcchhhccccCceEEEECCCceeccChHHHHHHHHHHhccchhcccccHHHHHH Q lcl|Aclame:pro 1 MSRN-KTRRAARAASAHV-RT-ANTDAPTEHHTDRAAQAEVFSFGDPVEVLDRRELLDYVECMRMGQWYEPPMPWDGLAR 77 (368) Q Consensus 1 m~~~-k~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~ 77 (368) |+== |++...|..+.-. ++ ........+...... .+.++. .+...+...+++.|+..+. .+++..|+.+. T Consensus 1 m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v-~~~~a~~~~~v~~~i~~ia-~~iA~lp~~~~---- 73 (412) T protein:vir:26 1 MNVIAKENIVTRIKKKLIDNWIDQSTSKLYDFSPWKN-RSFWGV-INNTLETNETIFSAITKLS-NSMASLPLKMY---- 73 (412) T ss_pred CccchhhhhhhhhhhhHhhhhhcccccccccccccCC-cccccc-chhhhhccHHHHHHHHHHH-HhHhhCceeEe---- Confidence 4311 1111111111100 00 000000001111011 111111 1334556666777776554 56788887542 Q ss_pred HHHhcccccchhhhccc-hHHhhccCCCCcCH-HHHHHHHHhHhhhCCeeEEEEecCCcceEEEEEecccccccccCCCe Q lcl|Aclame:pro 78 SFRAAAHHSSAVYVKRN-ILVSTFIPHPLLSR-ATFERLVLDWQVFGNAYLERRENVLGGTIRLDTPLAKYVRRGLDLNT 155 (368) Q Consensus 78 ~~r~~~~~~~~~~~~~~-~~l~~~~~n~~~~~-~~~~~~~~~~ll~Gnay~~i~r~~~G~~~~L~~l~p~~v~~~~~~~~ 155 (368) +.. ...+|+ ..++...|||+++. +||+.++.+++++||||++|.|+..|++++|+|++|..|++..+.++ T Consensus 74 --~~~------~~~~~~~~~lL~~~PN~~~t~~~f~~~~~~~lll~Gnay~~i~r~~~G~~~~L~~l~~~~v~v~~~~~~ 145 (412) T protein:vir:26 74 --EDY------KVVNTEVSDLLTVSPNNSLSSFDFINQIETIRNEKGNAYVLIERDIYHQPSKLFLLNPDVVEMLIENQS 145 (412) T ss_pred --ecc------ccccchHHHHHHhhcccCCCHHHHHHHHHHHHhhcCceEEEEEECCCCcEEEEEEEcCceeEEEEeCCC Confidence 211 112444 33555689998875 78899999999999999999999999999999999999998766542 Q ss_pred ---eE-EEeCCceEEEEcCccEEEecCCCCcCCccccchhhHHHHHHHHHHHHHHHHHHHHhccCCCceeEEeCCCCccH Q lcl|Aclame:pro 156 ---YF-FVQNWQQPYTFAAGSVFHLQEPDINQEVYGLPEYLSALNATWLNESATLFRRRYYKNGSHAGFILYMTDAAQKQ 231 (368) Q Consensus 156 ---~~-~~~~~~~~~~~~~~dviH~r~~~~~~~~~G~spi~~a~~~i~~~~~a~~~~~~~f~ng~~p~gil~~~~~~l~~ 231 (368) +| +...+|....|+++||||||.+++.+++||+||+.+++++|+++.+++++. ++.++..++++++.+ ..+++ T Consensus 146 ~~~~y~~~~~~g~~~~~~~~evih~~~~~~~~~~~G~s~i~~~~~~i~~~~a~~~~~--~~~~~~~~~~i~~~~-~~l~~ 222 (412) T protein:vir:26 146 RELYYSIHAATGNKLIVHNMDMLHFKHIVASNMVQGISPIDVLKNTTDFDNAVRTFN--LTEMQKPDSFMLKYG-SNVGK 222 (412) T ss_pred cEEEEEEEcCCceEEEEccccEEEeCCCCCCCCcccccHHHHHHHHHHHHHHHHHHH--HHhcCCCCceEEecC-CCCCH Confidence 33 344567788999999999999878899999999999999999999999984 666666677777654 57999 Q ss_pred HHHHHHHHHHHHhccccccccccccccCccccccccccccchhhHHHHHHHHHHHHHHHHHHhCCChHHhcccccccccc Q lcl|Aclame:pro 232 EDVDTLREAMKSAKGPGNFRNLFMYAPNGKKDGIQLLPVSEVAAKDEFWNIKNVTRDDQLAAHRVPPQLMGIIPNNTGGF 311 (368) Q Consensus 232 e~~~~~k~~~~~~~g~~n~~~~~~l~~~g~~~g~~~~pl~~~~~d~qf~e~~~~~~~~Ia~~fgVPp~~lg~~~~~~~~~ 311 (368) |+++++++.|++.. +|+|+++++ ++|++|+|++++++|+||+|++++++++||++|||||++||... +++| T Consensus 223 e~~~~~~~~~~~~~--~~~g~~~vl-----~~g~~~~~l~~~~~d~q~~e~~~~~~~~Ia~afgVPp~~lg~~~--~~~~ 293 (412) T protein:vir:26 223 EKRQQVLEDFKQYY--EENGGILFQ-----EPGVEIEPLPKKYVSEDIVASENLTRERVANVFQLPSVFLNARS--NTNF 293 (412) T ss_pred HHHHHHHHHHHHHh--hcCCCeeec-----CCCceEEEcCCChhHHHHHHHHHHHHHHHHHHhCCCHHHhCCCC--CCCc Confidence 99999999998765 367788887 67899999999999999999999999999999999999999754 4699 Q ss_pred cCHHHHHHHHHHHHHHHHHHHHH-HHHhhcCc-------ceEeechhhhhcCChhhhhhhhhhcC Q lcl|Aclame:pro 312 GDVEKAAMVFARNEVKPLQDRLL-AINDWIGD-------EVVRFAPYALGGHDQPAAAPGGQRSA 368 (368) Q Consensus 312 sn~e~~~~~f~~~tl~P~~~~ie-~l~~~l~~-------~~~~F~~~~Llr~D~~~ra~~~~~~~ 368 (368) +|+|++.+.|+++||.||++.|| +||++|.+ .+|+||.++|+++|.++|++..++.- T Consensus 294 sn~e~~~~~f~~~~l~P~~~~ie~~ln~kLl~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~ 358 (412) T protein:vir:26 294 AKNEELNRFYLQHTLLPIVKQYEEEFNRKLLTKTDREKNRYFKFNVKSYLRADSATQAEVYFKAV 358 (412) T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcccccCcceEEeechhhhccCHHHHHHHHHHHH Confidence 99999999999999999999998 59988743 25999999999999999999877665 No 63 >protein:vir:102727 Length: 945 # NCBI annotation: portal protein # Family: family:all:2446 # MgeID: mge:1610 # MgeName: YS40 # Cross-refs: genbank:acc:YP_874016;genbank:gi:118197623;genbank:GeneID:4495919 Probab=100.00 E-value=2.4e-63 Score=363.90 Aligned_cols=351 Identities=12% Similarity=0.067 Sum_probs=251.1 Q ss_pred CCcCCCCccccccccccccc----cCCCcchhhccccCceEEEECCCce---eccChHHHHHHHHHHhccchhcccccHH Q lcl|Aclame:pro 1 MSRNKTRRAARAASAHVRTA----NTDAPTEHHTDRAAQAEVFSFGDPV---EVLDRRELLDYVECMRMGQWYEPPMPWD 73 (368) Q Consensus 1 m~~~k~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~g~p~---~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 73 (368) |+|.| ......+...++. ...+.........+...+|+ +..+ ..+...+++.|+.++. ++++..|+.++ T Consensus 71 ~kk~~--i~~pfkkk~~~~~~d~f~~s~es~s~vtsls~pdaf~-~vnVs~~~AlknsaV~scI~~IA-~sIAsLPlklY 146 (945) T protein:vir:10 71 LKKEK--IIVPYNHQEPPFKFNLFEYSPESLMYLPSISDPDAFF-LINLFRKYRFNNDSKLIKVSEIP-KKLTSKELEIY 146 (945) T ss_pred HHhhc--ccccccccccchhhhhhhccCccceecccccCcccee-eehhhhhhhhccHHHHHHHHHHH-hhhccCceEEE Confidence 44433 1222222111111 01111000111111112222 1121 1233445555555543 66888887532 Q ss_pred HHHHHHHhccccc-----chhhhccchHHhhccCCCCcCH-H----HHHHHHHhHhhhCCeeEEEEecCCcceEEEEEec Q lcl|Aclame:pro 74 GLARSFRAAAHHS-----SAVYVKRNILVSTFIPHPLLSR-A----TFERLVLDWQVFGNAYLERRENVLGGTIRLDTPL 143 (368) Q Consensus 74 ~l~~~~r~~~~~~-----~~~~~~~~~~l~~~~~n~~~~~-~----~~~~~~~~~ll~Gnay~~i~r~~~G~~~~L~~l~ 143 (368) +....+. ..+...|+...+..+|||+++. + |++.++.+++++||+|+++.|+..|+|++|+|++ T Consensus 147 ------rr~edG~~~~~~kk~~~~hpL~~LL~rPNp~mT~~eFwqsFl~~Lv~dLLL~GNAYieIiRd~~G~ii~L~pLd 220 (945) T protein:vir:10 147 ------KHIEDKHVNYYLKRIRDARNILEFLERPDPYFSEVNSWEYLLGMVLDDILTIDRGAIVKIRDEQGNLVAITPVD 220 (945) T ss_pred ------EecccCcccccccccccchHHHHHHhCCCcccChhHHHHHHHHHHHHHHhhcCCeEEEEEECCCCcEEEEEEEC Confidence 2221111 1223445544444589998875 4 4456778999999999999999999999999999 Q ss_pred ccccccccCCCe---e-EEEe-CCceEEEEcCccEE-EecCCCCcCC--ccccchhhHHHHHHHHHHHHHHHHHHHH-hc Q lcl|Aclame:pro 144 AKYVRRGLDLNT---Y-FFVQ-NWQQPYTFAAGSVF-HLQEPDINQE--VYGLPEYLSALNATWLNESATLFRRRYY-KN 214 (368) Q Consensus 144 p~~v~~~~~~~~---~-~~~~-~~~~~~~~~~~dvi-H~r~~~~~~~--~~G~spi~~a~~~i~~~~~a~~~~~~~f-~n 214 (368) |.+|++..+.++ | |... +++....+.++|+| |++.+++.+. .||+||+.+++++|+.+.++++|+.++| +| T Consensus 221 Ps~Vti~~ddDG~~~y~Yv~~idG~~~~~v~a~DvIlhirn~s~DG~~~GyGlSPIeaa~~aI~~alAaek~aar~FskN 300 (945) T protein:vir:10 221 GTTIKPILSEDTGIVVGYVQEVDGAIVAHFDKRDVVLFRQNLTPDVYMYGYSLPPIEILYKVILSDIFIDKGNLDYYRKG 300 (945) T ss_pred CcceEEEEcCCCcEEEEEEEecCCceEEEecCCceEEEeccCCCCcccccCCchHHHHHHHHHHHHHHHHHHHHHHHHhC Confidence 999998776553 2 2223 44455678888865 6677766433 3699999999999999999999999999 58 Q ss_pred cCCCceeEEeCC---------CCccHHHHHHHHHHHHHhccccccccccccccCccccccccccccchhhHHHHHHHHHH Q lcl|Aclame:pro 215 GSHAGFILYMTD---------AAQKQEDVDTLREAMKSAKGPGNFRNLFMYAPNGKKDGIQLLPVSEVAAKDEFWNIKNV 285 (368) Q Consensus 215 g~~p~gil~~~~---------~~l~~e~~~~~k~~~~~~~g~~n~~~~~~l~~~g~~~g~~~~pl~~~~~d~qf~e~~~~ 285 (368) |++|+|||++++ ..+++++++++++.|++.+++.|.|+++++ ++|++|+|++++++|+||+|++++ T Consensus 301 Ga~PsGILsvkg~~~~d~k~~~~LseEq~erlKe~wee~~sG~NnG~piVL-----deGmef~pLs~s~~DaQfLEsrkf 375 (945) T protein:vir:10 301 GSIPEGILAIEPPSYKEGDIYPQLSREQLESIQRQLQAIMMGDYTQVPILS-----GGKFTWIDFKGKRRDMQFKELAEF 375 (945) T ss_pred CCccceEEEecCccccccccccccCHHHHHHHHHHHHHHhCCcccccceec-----CCCceEEEccCChhHHHHHHHHHH Confidence 999999998752 458999999999999998887888888887 578999999999999999999999 Q ss_pred HHHHHHHHhCCChHHhcccccccccccCHHHHHHHHHHHHHHHHHHHHHH-HHhhcCc----ceEeechhhhhcCChhhh Q lcl|Aclame:pro 286 TRDDQLAAHRVPPQLMGIIPNNTGGFGDVEKAAMVFARNEVKPLQDRLLA-INDWIGD----EVVRFAPYALGGHDQPAA 360 (368) Q Consensus 286 ~~~~Ia~~fgVPp~~lg~~~~~~~~~sn~e~~~~~f~~~tl~P~~~~ie~-l~~~l~~----~~~~F~~~~Llr~D~~~r 360 (368) ++++||++|||||++||+.++ ++++|+|++.+.|++++|.||++.||+ +|++|.+ ..++|+++.+.++|.+++ T Consensus 376 s~eeIArAFGVPP~lLG~~e~--st~SNiEqq~~~Fv~~tL~Pil~~IEqeLNrkLl~~~eg~~i~fdFd~ldl~D~ksr 453 (945) T protein:vir:10 376 VARKICAVYQVSPQDVGILEG--SNKATAEVMASLTKAKGLEPLMATISKGFDEVVSEFRNEKDIKLWFKEDDLEKERDW 453 (945) T ss_pred HHHHHHHHhCCCHHHcccCCC--CCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccCceeEEEecchhccCHHHH Confidence 999999999999999998755 689999999999999999999999995 8988743 246777777778899999 Q ss_pred hhhhhhcC Q lcl|Aclame:pro 361 APGGQRSA 368 (368) Q Consensus 361 a~~~~~~~ 368 (368) ++..+... T Consensus 454 aEal~kli 461 (945) T protein:vir:10 454 WNIIQGQL 461 (945) T ss_pred HHHHHHHH Confidence 98776544 No 64 >protein:vir:100187 Length: 385 # NCBI annotation: putative portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:1524 # MgeName: phi AT3 # Cross-refs: genbank:acc:YP_025029;genbank:gi:48697262;genbank:GeneID:2948285 Probab=100.00 E-value=5.8e-63 Score=361.77 Aligned_cols=333 Identities=12% Similarity=0.110 Sum_probs=253.3 Q ss_pred CCcCCCC--ccccccccccccccCCCcchhhccccCceEEEECCCceeccChHHHHHHHHHHhccchhcccccHHHHHHH Q lcl|Aclame:pro 1 MSRNKTR--RAARAASAHVRTANTDAPTEHHTDRAAQAEVFSFGDPVEVLDRRELLDYVECMRMGQWYEPPMPWDGLARS 78 (368) Q Consensus 1 m~~~k~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~ 78 (368) |.....+ .++... ....... ........+.... ..-.+...+...++..|+.++. +.++..|+... T Consensus 1 Mg~~~~~~~~~~~~~---~~~~~~~--~~~~~~~~~~~~~-~~v~~~~al~~~~v~~~i~~ia-~~ia~~p~~v~----- 68 (385) T protein:vir:10 1 MGLLTPRNFNKRKAK---NMVYPSN--PAFFTTTVGGMQL-SYVSALSALQNTNVYSVINRIA-SDVASAHFKTE----- 68 (385) T ss_pred Cccccchhccccccc---ccccccc--hhhhhhhccccCc-cccCHHHhhccHHHHHHHHHHH-HHHhhCceeee----- Confidence 5533211 111000 0000000 0000000000000 0011233444556666665543 55667776421 Q ss_pred HHhcccccchhhhccchHHhhccCCCCcCH-HHHHHHHHhHhhhCCeeEEEEecCCcceEEEEEecccccccccCCCe-e Q lcl|Aclame:pro 79 FRAAAHHSSAVYVKRNILVSTFIPHPLLSR-ATFERLVLDWQVFGNAYLERRENVLGGTIRLDTPLAKYVRRGLDLNT-Y 156 (368) Q Consensus 79 ~r~~~~~~~~~~~~~~~~l~~~~~n~~~~~-~~~~~~~~~~ll~Gnay~~i~r~~~G~~~~L~~l~p~~v~~~~~~~~-~ 156 (368) +|...-+..+|||+++. +|++.++.+++++||||++++|+ +++++|+++.+|++..+.++ + T Consensus 69 -------------~~~~~~ll~~PN~~~t~~~f~~~~~~~l~l~Gn~~~~i~r~----~~~~~p~~~~~v~~~~~~~~~~ 131 (385) T protein:vir:10 69 -------------NTATLNRLESPSSLIGRFSFWQGALMQLCLSGNDYIPLVGQ----NLEHIPNSDVQINYLPGNMGIV 131 (385) T ss_pred -------------ccchhhhhhcCCCCCCHHHHHHHHHHHhhhcCCeEEEEEcC----ceeEeecCCceEEEEEcCCceE Confidence 23333344589998775 78889999999999999999875 57899999999998776655 2 Q ss_pred EE--EeCCceEEEEcCccEEEecCCCC--cCCccccchhhHHHHHHHHHHHHHHHHHHHHhccCCCceeEEeCCCCccHH Q lcl|Aclame:pro 157 FF--VQNWQQPYTFAAGSVFHLQEPDI--NQEVYGLPEYLSALNATWLNESATLFRRRYYKNGSHAGFILYMTDAAQKQE 232 (368) Q Consensus 157 ~~--~~~~~~~~~~~~~dviH~r~~~~--~~~~~G~spi~~a~~~i~~~~~a~~~~~~~f~ng~~p~gil~~~~~~l~~e 232 (368) |. ...++..+.|+++||||||.+++ .++++|+||+.+++.+|.++.++++|..++|+||++|+|||++++...+++ T Consensus 132 ~~~~~~~~~~~~~~~~~eiihik~~~~~~~~~~~G~s~i~~~~~~i~~~~~~~~~~~~~~~ng~~~~gil~~~~~~~~~e 211 (385) T protein:vir:10 132 YTVLESNDRPQMVLRQDQMLHFRLMPDPQYRYLIGRSPLESLQNALNLDDKASKSNMSAMENQINPAGKLTISNYLSDGK 211 (385) T ss_pred EEEEEcCCceEEEEccccEEEeccCCCCcccccccccHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEeCCCCCCHH Confidence 22 23456788899999999997654 458899999999999999999999999999999999999999987666889 Q ss_pred HHHHHHHHHHHhccccccccccccccCccccccccccccchhhHHHHH-HHHHHHHHHHHHHhCCChHHhcccccccccc Q lcl|Aclame:pro 233 DVDTLREAMKSAKGPGNFRNLFMYAPNGKKDGIQLLPVSEVAAKDEFW-NIKNVTRDDQLAAHRVPPQLMGIIPNNTGGF 311 (368) Q Consensus 233 ~~~~~k~~~~~~~g~~n~~~~~~l~~~g~~~g~~~~pl~~~~~d~qf~-e~~~~~~~~Ia~~fgVPp~~lg~~~~~~~~~ 311 (368) +++++++.|++.+++.|+|+++++ +.|++|+++++++.|+||+ |.+++++++||++|||||++||..+.+++++ T Consensus 212 ~~~~~~~~~~~~~~~~n~~~~~vl-----~~g~~~~~l~~~~~d~~~l~e~~~~~~~~Ia~~fgVp~~~lg~~~~~~~~~ 286 (385) T protein:vir:10 212 DLESAREEFEKANTGDNSGRLMVL-----PDGFDYTQLEMKTDVFKALADNSAYSADQISKAFGVPSDILGGGTSTESQH 286 (385) T ss_pred HHHHHHHHHHHHhCccccCCcccc-----CCCceEEecCCChhHHHHHHHHHHHHHHHHHHHhCCCHHHcCCccCCCccc Confidence 999999999998888999999998 6789999999999999986 9999999999999999999999877677899 Q ss_pred cCHHHHHHHHHHHHHHHHHHHHH-HHHhhcCcceEeechhhhhcCChhhhhhhhhhcC Q lcl|Aclame:pro 312 GDVEKAAMVFARNEVKPLQDRLL-AINDWIGDEVVRFAPYALGGHDQPAAAPGGQRSA 368 (368) Q Consensus 312 sn~e~~~~~f~~~tl~P~~~~ie-~l~~~l~~~~~~F~~~~Llr~D~~~ra~~~~~~~ 368 (368) +|+||+...| ..||.||++.|| +++++|....++||.+.|+++|.+++++..++.. T Consensus 287 sn~eq~~~~~-~~~l~P~~~~ie~~l~~~l~~~~~~f~~~~ll~~d~~~~~~~~~~~~ 343 (385) T protein:vir:10 287 SNIDQIKATY-LANLNSYVNPIVDELRLKMNAPDLELDIKDMLDVDDSALINQVSNLA 343 (385) T ss_pred ccHHHHHHHH-HHHHHHHHHHHHHHHHHhhCCceEEeechhhhccCHHHHHHHHHHHH Confidence 9999886655 569999999998 5999998888999999999999999999877665 No 65 >protein:vir:80644 Length: 551 # NCBI annotation: gp23 # Family: family:all:2446 # MgeID: mge:1883 # MgeName: A511 # Cross-refs: genbank:acc:YP_001468463;genbank:gi:157325038;genbank:GeneID:5601615 Probab=100.00 E-value=4.9e-63 Score=362.19 Aligned_cols=348 Identities=14% Similarity=0.086 Sum_probs=235.1 Q ss_pred CCcCCCCccccccccccccccCCCcchhhccccCceEEEECCCceeccChHHHHHHHHHHhccchhcccccHHHHHHHHH Q lcl|Aclame:pro 1 MSRNKTRRAARAASAHVRTANTDAPTEHHTDRAAQAEVFSFGDPVEVLDRRELLDYVECMRMGQWYEPPMPWDGLARSFR 80 (368) Q Consensus 1 m~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~r 80 (368) |-...+|.+.-+.++-.+ +. .+.... . ..+. ..|.+ .+..++-+... .++..|+...++..+.+ T Consensus 39 ~~~~~~k~~~~~~~a~~~--~~-~~~~~~----~--~~~~-~r~~~-~~~~~l~~~~~-----~~~~npiv~~~I~~ia~ 102 (551) T protein:vir:80 39 EQEQISKAMNNKEVAYSQ--PV-IGSMSA----N--PGFK-TKPSI-RNNQDLHGVLK-----KFGGNIILNAIINTRSN 102 (551) T ss_pred cHHHHHHhhccCcceeec--cc-ccceec----C--cccc-cCccc-cChhHHHHHHH-----HhhcCHHHHHHHHHHHH Confidence 111111111100100000 00 000000 0 0011 01211 11111111110 12223333333333332 Q ss_pred hccc-----------ccchhh--------hcc------chHHhhccCCCC------cCHHHHHHHHHhHhhhCCeeEEEE Q lcl|Aclame:pro 81 AAAH-----------HSSAVY--------VKR------NILVSTFIPHPL------LSRATFERLVLDWQVFGNAYLERR 129 (368) Q Consensus 81 ~~~~-----------~~~~~~--------~~~------~~~l~~~~~n~~------~~~~~~~~~~~~~ll~Gnay~~i~ 129 (368) ..+. .+-.+. .++ ...-+...||++ +..+|++.++.+++++||+|++++ T Consensus 103 ~IA~~~~~~~~~~~g~~~~i~~kd~~~~~~~~~~~~~~~i~~~l~~pn~~~~p~~~s~~~f~~~lv~dlll~Gnay~~i~ 182 (551) T protein:vir:80 103 QVSMYCKPARHSEKGVGFEVRLKDLDKKPTSHDEATIKRIESFIEKTGVDNDINRDSFSSFVKKIVRDTYMYDQVNFEKV 182 (551) T ss_pred HHhhhhhhhhhhcCCCCceEEecccCcccChhHHHHHHHHHHHHHhcCCCCCCccchHHHHHHHHHHHHHhcCCEEEEEE Confidence 2211 000000 000 011123456654 334789999999999999999999 Q ss_pred ecCCcceEEEEEecccccccccCCCe--------eEEEeCCceEEEEcCccEEEecCCC---CcCCccccchhhHHHHHH Q lcl|Aclame:pro 130 ENVLGGTIRLDTPLAKYVRRGLDLNT--------YFFVQNWQQPYTFAAGSVFHLQEPD---INQEVYGLPEYLSALNAT 198 (368) Q Consensus 130 r~~~G~~~~L~~l~p~~v~~~~~~~~--------~~~~~~~~~~~~~~~~dviH~r~~~---~~~~~~G~spi~~a~~~i 198 (368) |+..|+|++|+||+|.+|++..+.++ |+++..++....|+++||||++.+. +.+++||+|||.+++.+| T Consensus 183 rd~~G~~~~L~~l~p~~V~v~~~~~g~~~~~~~~y~~~~~g~~~~~~~~~eiiH~~~n~~~~~~~~~~G~spi~~a~~~i 262 (551) T protein:vir:80 183 FNRNQSMVRFVAKDPTTIFFATTADGKIPDNGNRFVQVIDQKIVATFNAREMAFAVRNPRSDIYATGYGYPELEIALKQF 262 (551) T ss_pred ECCCCcEEEEEEeCCceeEEEECCccccccCceEEEEEeCCcEEEEEcccceEEecccCCCCcccccccccHHHHHHHHH Confidence 99999999999999999998765443 4455566667889999999999643 345789999999999999 Q ss_pred HHHHHHHHHHHHHHhccCCCceeEEeCC-CCccHHHHHHHHHHHHHhc-cccccccccccccCccccccccccccchhhH Q lcl|Aclame:pro 199 WLNESATLFRRRYYKNGSHAGFILYMTD-AAQKQEDVDTLREAMKSAK-GPGNFRNLFMYAPNGKKDGIQLLPVSEVAAK 276 (368) Q Consensus 199 ~~~~~a~~~~~~~f~ng~~p~gil~~~~-~~l~~e~~~~~k~~~~~~~-g~~n~~~~~~l~~~g~~~g~~~~pl~~~~~d 276 (368) ..+.++++|+.+||+||++|+|||.+++ ..+++++++++++.|++.+ |..|+|+++++. ++|++|+|++++++| T Consensus 263 ~~~~a~~~~~~~~f~Ng~~p~giL~~~~~~~lt~e~~~~lk~~~~~~~~G~~nag~~~vl~----~~g~~~~~l~~~~~D 338 (551) T protein:vir:80 263 IAHENTEAFNDRFFSHGGTTRGILQIKAAQQQSQHALEIFKREWKNSLSGINGSWQIPVVS----AEDVKFVNMTPSARD 338 (551) T ss_pred HHHHHHHHHHHHHHHcCCCcceEEEEcCCCCCCHHHHHHHHHHHHHHhcCccccCcccccc----CCCceEEEccCChhH Confidence 9999999999999999999999999864 4589999999999998855 668999987664 467999999999999 Q ss_pred HHHHHHHHHHHHHHHHHhCCChHHhcccccc--------cccccCHHHHHHHHHHHHHHHHHHHHH-HHHhhcCcc---e Q lcl|Aclame:pro 277 DEFWNIKNVTRDDQLAAHRVPPQLMGIIPNN--------TGGFGDVEKAAMVFARNEVKPLQDRLL-AINDWIGDE---V 344 (368) Q Consensus 277 ~qf~e~~~~~~~~Ia~~fgVPp~~lg~~~~~--------~~~~sn~e~~~~~f~~~tl~P~~~~ie-~l~~~l~~~---~ 344 (368) +||+|++++++++||++|||||++||+..+. +.+++|+|++.+.|+++||.||+++|| +||++|.+. . T Consensus 339 ~qfle~~~~~~~~Ia~aFgVPp~~lG~~~~~~~~~~~~~s~t~sn~e~~~~~f~~~tL~P~~~~ie~~ln~~L~~~~~~~ 418 (551) T protein:vir:80 339 MEFEKWLNYLINVISALYGIDPAEINIPNNGGATGSKGGSLNEGNSAEKNQASKNKGLQPLLGFIEDFINKHIVAEFGDK 418 (551) T ss_pred HHHHHHHHHHHHHHHHHhcCCHHHcCcccccccccccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCc Confidence 9999999999999999999999999986543 247899999999999999999999999 489888653 3 Q ss_pred EeechhhhhcCChhhhhhhhh--hcC Q lcl|Aclame:pro 345 VRFAPYALGGHDQPAAAPGGQ--RSA 368 (368) Q Consensus 345 ~~F~~~~Llr~D~~~ra~~~~--~~~ 368 (368) ++|+++.+.+.|.+.++..+. .+. T Consensus 419 ~~f~f~~~~~~~~~~~~~~~~~~~~g 444 (551) T protein:vir:80 419 YTFQFVGGDIKSELESVKILAEKAKV 444 (551) T ss_pred eEEEeeccChhhHHHHHHHHHHHhcC Confidence 567777777777666554221 111 No 66 >protein:vir:100691 Length: 535 # NCBI annotation: hypothetical protein # Family: family:all:2446 # MgeID: mge:1633 # MgeName: LP65 # Cross-refs: genbank:acc:YP_164747;genbank:gi:56693160;genbank:GeneID:3197324 Probab=100.00 E-value=9.8e-63 Score=360.53 Aligned_cols=356 Identities=13% Similarity=0.051 Sum_probs=241.1 Q ss_pred CCcCCCC----ccccccccccc-------cccCCCcchhhccccCceEEEE-CCCceeccChHHHH-------------- Q lcl|Aclame:pro 1 MSRNKTR----RAARAASAHVR-------TANTDAPTEHHTDRAAQAEVFS-FGDPVEVLDRRELL-------------- 54 (368) Q Consensus 1 m~~~k~~----~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~-~g~p~~~~~~~~~~-------------- 54 (368) |+.+|.- ...+......+ +++.....-... .+....|. -..+...++..+++ T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~ 90 (535) T protein:vir:10 13 LSNKKSTSYIELGDYDKDIVNKAIRPGRASARDTVDGIDIA--DGNVAGQYSVASISDVLSTKKLLKAYADNDIVQAIIR 90 (535) T ss_pred hhhhhhhhhHHHhhhhHHHHHhhhhhhhhhhhccccccccc--cCCcccccccCccccccCHHHHHHHhccChhHHHHHH Confidence 5544421 11111111000 000000000000 00000010 00011111111111 Q ss_pred ------HHHHHHhc--cchhcccccHHHHHHHHHhcccc-cchhhhccch-HHhhccCCCCcCH-----HHHHHHHHhHh Q lcl|Aclame:pro 55 ------DYVECMRM--GQWYEPPMPWDGLARSFRAAAHH-SSAVYVKRNI-LVSTFIPHPLLSR-----ATFERLVLDWQ 119 (368) Q Consensus 55 ------~~~~~~~~--~~~~~~p~~~~~l~~~~r~~~~~-~~~~~~~~~~-~l~~~~~n~~~~~-----~~~~~~~~~~l 119 (368) +++.|++. ...+..|+.+ ++.+... ...+...|+. .++...||++++. +|+++++.+++ T Consensus 91 t~~~~va~~~~i~~~s~~~~~~~i~l------~~~~~~~~~~~~~~~~~l~~lL~~~PN~~~~~~~~~~~~~~~lv~d~l 164 (535) T protein:vir:10 91 TRTNQVLTYSNPSRYNRNGVGFKVEL------KDATKVMSKAQIKRAHEIEDFIYNTGSEYYEWRDTFPRLLTKIINDMY 164 (535) T ss_pred HHHHHHHHHHHHHHHhcccCcceeEE------EeccCCCcchhhhhhhHHHHHHHhCCCCCCChhHHHHHHHHHHHHHHH Confidence 11112111 1111222211 1111111 1122333443 3566789998764 35556777766 Q ss_pred hh-CCeeEEEEecCCcceEEEEEecccccccccCCC------eeEEEeCCceEEEEcCccEEEecCCCC---cCCccccc Q lcl|Aclame:pro 120 VF-GNAYLERRENVLGGTIRLDTPLAKYVRRGLDLN------TYFFVQNWQQPYTFAAGSVFHLQEPDI---NQEVYGLP 189 (368) Q Consensus 120 l~-Gnay~~i~r~~~G~~~~L~~l~p~~v~~~~~~~------~~~~~~~~~~~~~~~~~dviH~r~~~~---~~~~~G~s 189 (368) ++ ||+|++|.|+..|+|++|+||+|.+|++..+.+ .||++..++....|.++|||||+.++. .+++||+| T Consensus 165 ~~~g~ay~~i~r~~~G~~~~L~~l~p~~V~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~eiih~~~~~~~~~~~~~~G~S 244 (535) T protein:vir:10 165 VQDQINIERIFKNDSNELDHFNAVDASKVVISYSPRSKDQPRKFEQFVSETKSVKFSERNLTFINYWNLSDTDRRGYGYS 244 (535) T ss_pred hhCCceEEEEEECCCCcEEEEEEeCCceeEEEEcCccccCceEEEEEecCceeEEECcccEEEEeccCCCCccccccccc Confidence 55 589999999999999999999999999865432 356677777888999999999997543 34778999 Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHhccCCCceeEEeCC---CCccHHHHHHHHHHHHHhc-cccccccccccccCcccccc Q lcl|Aclame:pro 190 EYLSALNATWLNESATLFRRRYYKNGSHAGFILYMTD---AAQKQEDVDTLREAMKSAK-GPGNFRNLFMYAPNGKKDGI 265 (368) Q Consensus 190 pi~~a~~~i~~~~~a~~~~~~~f~ng~~p~gil~~~~---~~l~~e~~~~~k~~~~~~~-g~~n~~~~~~l~~~g~~~g~ 265 (368) |+.+++.+|+++.++++|+.++|+||++|+|||++++ ..+++|++++|++.|++.+ |..|+|+++++. ..|+ T Consensus 245 pi~~~~~~i~~~~aa~~~~~~~f~ng~~p~giL~~~~~~~~~ls~e~~e~lk~~~~~~~~G~~nag~~~vl~----~~g~ 320 (535) T protein:vir:10 245 PVEASIPLIRAIYDTEQFNARFFSQGGTTRGILVIDQDGDAQANQMMLAGIRRQWTSQGSGLGGAWKIPILA----AKDA 320 (535) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccCCccEEEEecCCCCcccCHHHHHHHHHHHHHHhcCccccccccccc----CCCc Confidence 9999999999999999999999999999999999874 3589999999999998865 668999987774 3579 Q ss_pred ccccccchhhHHHHHHHHHHHHHHHHHHhCCChHHhccccccc----------ccccCHHHHHHHHHHHHHHHHHHHHH- Q lcl|Aclame:pro 266 QLLPVSEVAAKDEFWNIKNVTRDDQLAAHRVPPQLMGIIPNNT----------GGFGDVEKAAMVFARNEVKPLQDRLL- 334 (368) Q Consensus 266 ~~~pl~~~~~d~qf~e~~~~~~~~Ia~~fgVPp~~lg~~~~~~----------~~~sn~e~~~~~f~~~tl~P~~~~ie- 334 (368) +|++++++++|+||+|++++++++||++|||||++||+.++.+ .+.+++|++...|+++||.||++.|| T Consensus 321 ~~~~l~~~~~D~qfle~~~~~~~eIa~afgVPp~~lG~~~~at~sn~~~~~~~~~~s~~E~~~~~~~~~~L~P~l~~ie~ 400 (535) T protein:vir:10 321 KFVNMTQNSRDMEFDKFLNFMIYDTAAIFQMQPEEINFPNNGGSTGKSGTKSVNEGSTAKAKLESSKDKGLTPLLSFIEQ 400 (535) T ss_pred eEEecCCChhHHHHHHHHHHHHHHHHHHhCCCHHHhccccCcccccchhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHH Confidence 9999999999999999999999999999999999999976521 23456788888999999999999999 Q ss_pred HHHhhcCcc---eEeechhhhhcCChhhhhhhhhhcC Q lcl|Aclame:pro 335 AINDWIGDE---VVRFAPYALGGHDQPAAAPGGQRSA 368 (368) Q Consensus 335 ~l~~~l~~~---~~~F~~~~Llr~D~~~ra~~~~~~~ 368 (368) +||++|.+. .++|+++.|+++|.++|++.++..- T Consensus 401 ~ln~~Ll~~~~~~~~f~f~~l~~~d~~~r~~~~~~~~ 437 (535) T protein:vir:10 401 VINDKIMRYVDTDYRFSFTLGDAQDKLQEEQVWKLKL 437 (535) T ss_pred HHhhhcccccCCeEEEEeccccccCHHHHHHHHHHHH Confidence 599888654 4789999999999999887554332 No 67 >protein:vir:4854 Length: 386 # NCBI annotation: putative portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:106 # MgeName: DT1 # Cross-refs: genbank:acc:NP_049394;genbank:gi:9632422;genbank:GeneID:1258515 Probab=100.00 E-value=4.1e-62 Score=357.13 Aligned_cols=330 Identities=11% Similarity=0.075 Sum_probs=247.1 Q ss_pred CCcCCCCccccccccccccccCCCcchhhccccCceEEEECCC---ceeccChHHHHHHHHHHhccchhcccccHHHHHH Q lcl|Aclame:pro 1 MSRNKTRRAARAASAHVRTANTDAPTEHHTDRAAQAEVFSFGD---PVEVLDRRELLDYVECMRMGQWYEPPMPWDGLAR 77 (368) Q Consensus 1 m~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~---p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~ 77 (368) |+--+..++.+++....+.........+. .+.+..|. +...+...++..|+.++. ..++..|+.+. T Consensus 1 M~~f~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~v~~~~~~~~~~v~~~i~~ia-~~ia~~p~~~~---- 69 (386) T protein:vir:48 1 MPIFNITNLATESPPISQGGFFDITDPDF------LSTLNGSEWVSAESALRNSDLFSIINQLS-NDLATVKLTAS---- 69 (386) T ss_pred Ccccccccccccccccccccccccccchh------cccccCCceechhhhhcchHHHHHHHHHH-HhhccCceeec---- Confidence 88776544443322111111111000011 11122222 233355566777776654 55777776432 Q ss_pred HHHhcccccchhhhccchHHhhccCCCCcCH-HHHHHHHHhHhhhCCeeEEEEecCCcceEEEEEecccccccccCCCe- Q lcl|Aclame:pro 78 SFRAAAHHSSAVYVKRNILVSTFIPHPLLSR-ATFERLVLDWQVFGNAYLERRENVLGGTIRLDTPLAKYVRRGLDLNT- 155 (368) Q Consensus 78 ~~r~~~~~~~~~~~~~~~~l~~~~~n~~~~~-~~~~~~~~~~ll~Gnay~~i~r~~~G~~~~L~~l~p~~v~~~~~~~~- 155 (368) ++....+...|||+++. +|++.++.+++++||||++|+|+..|++++|+|++|++|++..+.++ T Consensus 70 --------------~~~~~~l~~~pN~~~t~~~f~~~~~~~lll~Gna~~~i~r~~~g~~~~L~~l~~~~v~v~~~~~~~ 135 (386) T protein:vir:48 70 --------------RKQLQGIIDNPSNNANRFNFYQSIFAQMLLGGEAFAYRWRNENGRDMKWEYLRPSQVSFNRLDNKD 135 (386) T ss_pred --------------cchhHHHhhcCCCCCCHHHHHHHHHHHhhhcCcEEEEEEECCCCcEEEEEEecCceeEEEEcCCCc Confidence 23344566789998775 78889999999999999999999999999999999999998776432 Q ss_pred --eEEEeCC----ceEEEEcCccEEEecCCCCcCCccccchhhHHHHHHHHHHHHHHHHHHHHhccCCCceeEEeCCCCc Q lcl|Aclame:pro 156 --YFFVQNW----QQPYTFAAGSVFHLQEPDINQEVYGLPEYLSALNATWLNESATLFRRRYYKNGSHAGFILYMTDAAQ 229 (368) Q Consensus 156 --~~~~~~~----~~~~~~~~~dviH~r~~~~~~~~~G~spi~~a~~~i~~~~~a~~~~~~~f~ng~~p~gil~~~~~~l 229 (368) +|.+..+ +..+.|+++||||+|.+++.++++|+||+.+++.+|+++.++++|..++|+||++|+|||++++ .+ T Consensus 136 ~~~y~~~~~~~~~~~~~~~~~~evih~~~~~~~~~~~G~s~i~~~~~~i~~~~~~~~~~~~~~~ng~~~~~ii~~~~-~~ 214 (386) T protein:vir:48 136 GIYYNITFDDPRIPPKQHVPQGDVLHFKLLSVDGGLTSVSPLMALSRELNIQKASDKLTLNSLKNALNANGILKIKG-GG 214 (386) T ss_pred eEEEEEEecCccccceeEecCccEEEecCCCCCCceeeccHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEeCC-CC Confidence 4444322 3567899999999999998778999999999999999999999999999999999999999876 58 Q ss_pred cHHHHHHHHHHHHHhccccccccccccccCccccccccccccchhhHHHHHHHHHHHHHHHHHHhCCChHHhcccccccc Q lcl|Aclame:pro 230 KQEDVDTLREAMKSAKGPGNFRNLFMYAPNGKKDGIQLLPVSEVAAKDEFWNIKNVTRDDQLAAHRVPPQLMGIIPNNTG 309 (368) Q Consensus 230 ~~e~~~~~k~~~~~~~g~~n~~~~~~l~~~g~~~g~~~~pl~~~~~d~qf~e~~~~~~~~Ia~~fgVPp~~lg~~~~~~~ 309 (368) ++|+.+++++.|.. +..|+|+++++ +.|++|++++++++|+||+|++++++++||++|||||++||. ++ T Consensus 215 ~~e~~~~~~~~~~~--~~~n~g~~~vl-----~~g~~~~~l~~~~~d~q~~e~~~~~~~~Ia~~fgVPp~~lg~----~~ 283 (386) T protein:vir:48 215 LLDFKTKLSRSRQA--MKQMQGGPLVL-----DDLEEFTPLEIKSNVSQLLKQADWTTGQFAKVYGIPENVVGG----QG 283 (386) T ss_pred CHHHHHHHHHHHHH--hhcCCCCceec-----CCCceEEEcCCChhHHHHHHHHHHHHHHHHHHhCCCHHHhCC----CC Confidence 99999999988865 44688999888 578999999999999999999999999999999999999985 25 Q ss_pred cccCHHHHHHHHHHHHHHHHHHHHH-HHHhhcCcceEeec---------------hhhhhcCChhhhhhhhhhcC Q lcl|Aclame:pro 310 GFGDVEKAAMVFARNEVKPLQDRLL-AINDWIGDEVVRFA---------------PYALGGHDQPAAAPGGQRSA 368 (368) Q Consensus 310 ~~sn~e~~~~~f~~~tl~P~~~~ie-~l~~~l~~~~~~F~---------------~~~Llr~D~~~ra~~~~~~~ 368 (368) +++|++++.+.|++++|.|+++.|| ++|++|.++ ++|+ .+.|++++..++.|.-+..- T Consensus 284 ~~~~~e~~~~~~~~~~l~P~~~~ie~~l~~~l~~~-~~~~~~~~~~~d~~~~~~~~~~l~~~g~~t~nE~r~~lg 357 (386) T protein:vir:48 284 DQQSSLEMSLDLYNKAVSRYLRPFLSELSQKLSCD-VDADILPAVDPTGSNSVSRINSMVKSGTLAQNQGLYILQ 357 (386) T ss_pred CcccHHHHHHHHHHHHHHHHHHHHHHHHHHhhcch-hhcchhhhhccChHHHHHHHHHHHhCCCcCHHHHHHHhh Confidence 7889999999999999999999998 599988754 3444 44444444444444222110 No 68 >protein:vir:63755 Length: 547 # NCBI annotation: gp14 # Family: family:all:2446 # MgeID: mge:1517 # MgeName: P100 # Cross-refs: genbank:gi:82547619;genbank:GeneID:3783506 Probab=100.00 E-value=4.6e-62 Score=356.85 Aligned_cols=350 Identities=13% Similarity=0.095 Sum_probs=233.7 Q ss_pred CCcCCCCccccccccccccccCCCcchhhccccCceEEEE-CC-CceeccChHHHHHHHHHHhccchhcccccHHHHHHH Q lcl|Aclame:pro 1 MSRNKTRRAARAASAHVRTANTDAPTEHHTDRAAQAEVFS-FG-DPVEVLDRRELLDYVECMRMGQWYEPPMPWDGLARS 78 (368) Q Consensus 1 m~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g-~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~ 78 (368) |.++....-. +.+.. -+.+...+.-.+..+-. ++ .|.+ .+..++-+... .++..|+...++..+ T Consensus 31 ~~~~~~~~~~-------k~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~-~~~~~l~~l~~-----~~~~npiv~~~I~~~ 96 (547) T protein:vir:63 31 IQQREQEQIS-------KAMNN-KEVAYSQPVIGSMSANPGFKTKPSI-RNNQDLHGVLK-----KFGGNIILNAIINTR 96 (547) T ss_pred hhhhhHHHHH-------Hhhcc-cchhhhchhhheeecccccccCCcc-CChhHHHHHHH-----HhhcCHHHHHHHHHH Confidence 2211100000 00000 00000000001111100 11 1221 22222211111 112223333333222 Q ss_pred HHhcc-----------cccchh--------hhcc------chHHhhccCCCC------cCHHHHHHHHHhHhhhCCeeEE Q lcl|Aclame:pro 79 FRAAA-----------HHSSAV--------YVKR------NILVSTFIPHPL------LSRATFERLVLDWQVFGNAYLE 127 (368) Q Consensus 79 ~r~~~-----------~~~~~~--------~~~~------~~~l~~~~~n~~------~~~~~~~~~~~~~ll~Gnay~~ 127 (368) .+..+ ..+-.+ ..++ ...-+...||++ +..+|++.++.+++++||+|++ T Consensus 97 a~~ia~~~~~~~~~~~~~~~~ir~k~~~~~~~~~~~~~~~~l~~~l~~pn~~~~p~~~s~~~f~~~lv~d~ll~Gn~~~~ 176 (547) T protein:vir:63 97 SNQVSMYCKPARHSEKGVGFEVRLKDLDKKPTSHDEATIKRIESFIEKTGVDNDINRDSFSSFVKKIVRDTYMYDQVNFE 176 (547) T ss_pred HHHHhhhhhhhhhhccCCCceeEecccccccChhhHHHHHHHHHHHHhhCCCCCCccchHHHHHHHHHHHHHhhCCEEEE Confidence 22111 000000 0000 111122345543 3457999999999999999999 Q ss_pred EEecCCcceEEEEEecccccccccCCCe--------eEEEeCCceEEEEcCccEEEecCCCC---cCCccccchhhHHHH Q lcl|Aclame:pro 128 RRENVLGGTIRLDTPLAKYVRRGLDLNT--------YFFVQNWQQPYTFAAGSVFHLQEPDI---NQEVYGLPEYLSALN 196 (368) Q Consensus 128 i~r~~~G~~~~L~~l~p~~v~~~~~~~~--------~~~~~~~~~~~~~~~~dviH~r~~~~---~~~~~G~spi~~a~~ 196 (368) ++|+..|+|++|+||+|.+|++..+.++ |+++..++....|.++||||++.+.. .++.||+|||.+++. T Consensus 177 i~rd~~G~~~~L~~l~p~~V~~~~~~~g~~~~~~~~y~~~~~~~~~~~~~~~eiih~r~n~~~~~~~~~~G~Spi~~~~~ 256 (547) T protein:vir:63 177 KVFNRNQSMVRFVAKDPTTIFFATTADGKIPDNGNRFVQVIDQKIVATFNAREMAFAVRNPRSDIYATGYGYPELEIALK 256 (547) T ss_pred EEECCCCcEEEEEEecCceeEEEECCccccccCceEEEEEcCCcEEEEeccccEEEecccCCCCcccccccccHHHHHHH Confidence 9999999999999999999998754432 45555666778899999999996543 346789999999999 Q ss_pred HHHHHHHHHHHHHHHHhccCCCceeEEeCC-CCccHHHHHHHHHHHHHh-ccccccccccccccCccccccccccccchh Q lcl|Aclame:pro 197 ATWLNESATLFRRRYYKNGSHAGFILYMTD-AAQKQEDVDTLREAMKSA-KGPGNFRNLFMYAPNGKKDGIQLLPVSEVA 274 (368) Q Consensus 197 ~i~~~~~a~~~~~~~f~ng~~p~gil~~~~-~~l~~e~~~~~k~~~~~~-~g~~n~~~~~~l~~~g~~~g~~~~pl~~~~ 274 (368) +|..+.++++|+.++|+||++|+|||.+++ ..+++++++++++.|++. .|.+|+|+++++. ++|++|+|+++++ T Consensus 257 ~i~~~~~a~~~~~~~f~Ng~~p~giL~~~~~~~ls~e~~~~lk~~~~~~~~G~~nagk~~vl~----~~g~~~~~l~~~~ 332 (547) T protein:vir:63 257 QFIAHENTEAFNDRFFSHGGTTRGILQIKAAQQQSQHALEIFKREWKNSLSGINGSWQIPVVS----AEDVKFVNMTPSA 332 (547) T ss_pred HHHHHHHHHHHHHHHHHcCCCcceEEEecCCCCCCHHHHHHHHHHHHHHhcCccccccccccc----CCCceEEEcCCCh Confidence 999999999999999999999999998864 458999999999999875 4668999987664 4679999999999 Q ss_pred hHHHHHHHHHHHHHHHHHHhCCChHHhcccccc--------cccccCHHHHHHHHHHHHHHHHHHHHH-HHHhhcCcc-- Q lcl|Aclame:pro 275 AKDEFWNIKNVTRDDQLAAHRVPPQLMGIIPNN--------TGGFGDVEKAAMVFARNEVKPLQDRLL-AINDWIGDE-- 343 (368) Q Consensus 275 ~d~qf~e~~~~~~~~Ia~~fgVPp~~lg~~~~~--------~~~~sn~e~~~~~f~~~tl~P~~~~ie-~l~~~l~~~-- 343 (368) +|+||+|++++++++||++|||||++||+..++ +.+++|+|++.+.|+++||.||+++|| +||++|.+. T Consensus 333 ~d~qfle~~~~~~~~Ia~afgVPP~~lG~~~~~~~~~~~~~s~t~sn~e~~~~~~~~~tL~P~~~~ie~~ln~~L~~~~~ 412 (547) T protein:vir:63 333 RDMEFEKWLNYLINVISALYGIDPAEINIPNNGGATGSKGGSLNEGNSAEKNQASKNKGLQPLLGFIEDFINKHIVAEFG 412 (547) T ss_pred hHHHHHHHHHHHHHHHHHHhCCCHHHcCcccccccccccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccC Confidence 999999999999999999999999999986542 347899999999999999999999999 589888653 Q ss_pred -eEeechhhhhcCChhhhhhhhh--hcC Q lcl|Aclame:pro 344 -VVRFAPYALGGHDQPAAAPGGQ--RSA 368 (368) Q Consensus 344 -~~~F~~~~Llr~D~~~ra~~~~--~~~ 368 (368) .++|+++.+.+.|...++.-.. .+. T Consensus 413 ~~~~~~f~~~~~~~~~~~~~~~~~~~~g 440 (547) T protein:vir:63 413 DKYTFQFVGGDIKSELESVKILAEKAKV 440 (547) T ss_pred CceEEEeeccccccHHHHHHHHHHHhCC Confidence 3566666776776655543221 111 No 69 >protein:vir:7407 Length: 392 # NCBI annotation: putative portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:146 # MgeName: P335 # Cross-refs: genbank:acc:NP_839924;genbank:gi:30089894;genbank:GeneID:1260681 Probab=100.00 E-value=7.2e-62 Score=355.80 Aligned_cols=332 Identities=8% Similarity=0.021 Sum_probs=241.6 Q ss_pred CCc---CCCCccccccccccccccCCCcchhhcccc--CceEEEECCCceeccChHHHHHHHHHHhccchhcccccHHHH Q lcl|Aclame:pro 1 MSR---NKTRRAARAASAHVRTANTDAPTEHHTDRA--AQAEVFSFGDPVEVLDRRELLDYVECMRMGQWYEPPMPWDGL 75 (368) Q Consensus 1 m~~---~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l 75 (368) |+- .|++++...++...... ......+..... .+...+ .+...+...+++.|+.++. ..++..|+.+. T Consensus 3 m~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~v---~~~~al~~~~v~~~v~~ia-~~ia~lp~~~~-- 75 (392) T protein:vir:74 3 LPILNFINQTNDPPEAGSVQSYF-PDGNDAQIMESLLGDNNEWV---SARAALRNSDLFSIILQLS-SDLAIVKINAE-- 75 (392) T ss_pred chhhhhhhcccCccccccccccc-ccCchhhhhhhccCCCCccc---chhhhhcchHHHHHHHHHH-HhhccCceeec-- Confidence 432 23222221111111000 000000111000 011111 2344566677777777654 45677776532 Q ss_pred HHHHHhcccccchhhhccchHHhhccCCCCcCH-HHHHHHHHhHhhhCCeeEEEEecCCcceEEEEEecccccccccCCC Q lcl|Aclame:pro 76 ARSFRAAAHHSSAVYVKRNILVSTFIPHPLLSR-ATFERLVLDWQVFGNAYLERRENVLGGTIRLDTPLAKYVRRGLDLN 154 (368) Q Consensus 76 ~~~~r~~~~~~~~~~~~~~~~l~~~~~n~~~~~-~~~~~~~~~~ll~Gnay~~i~r~~~G~~~~L~~l~p~~v~~~~~~~ 154 (368) ++....+...||++++. +|++.++.+++++||||++++|+..|++++|+|++|.+|++..+.+ T Consensus 76 ----------------~~~~~~l~~~PN~~~t~~~f~~~~~~~lll~Gna~~~i~r~~~G~~~~L~~i~~~~v~v~~~~~ 139 (392) T protein:vir:74 76 ----------------KKKNQGIIDNPSTNANKHGFWQSMFAQLLLGGEAFAYRWRNANGADMKWEYLRPSQVNTYYFEY 139 (392) T ss_pred ----------------cchhhhhhhhcCCCCCHHHHHHHHHHHhhhcCCEEEEEEECCCCcEEEEEEEcCceeEEEEcCC Confidence 11122345579998775 7888999999999999999999999999999999999998876543 Q ss_pred e---eEEEeCC----ceEEEEcCccEEEecCCCCcCCccccchhhHHHHHHHHHHHHHHHHHHHHhccCCCceeEEeCCC Q lcl|Aclame:pro 155 T---YFFVQNW----QQPYTFAAGSVFHLQEPDINQEVYGLPEYLSALNATWLNESATLFRRRYYKNGSHAGFILYMTDA 227 (368) Q Consensus 155 ~---~~~~~~~----~~~~~~~~~dviH~r~~~~~~~~~G~spi~~a~~~i~~~~~a~~~~~~~f~ng~~p~gil~~~~~ 227 (368) + +|.+..+ +....++++|||||+.+++.+.++|+||+.+++.+|+++.++++|..++|+||++|+|||++++. T Consensus 140 ~~~~~y~~~~~~~~~~~~~~~~~~evih~~~~~~~~~~~G~s~i~~~~~~i~~~~~~~~~~~~~f~ng~~p~~il~~~~~ 219 (392) T protein:vir:74 140 ENGMYYNITFDDPKIEPILQAPQSDLIHMKLLSIDGGKTGISPLYSLRRESKIQRASDRLTISSLNSSLNVPGVLTVKGG 219 (392) T ss_pred CceEEEEEEecCCccceeEEEcCccEEEecCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEeCCC Confidence 2 4444432 34578999999999998887668999999999999999999999999999999999999999764 Q ss_pred C-ccHHHHHHHHHHHHHhccccccccccccccCccccccccccccchhhHHHHHHHHHHHHHHHHHHhCCChHHhccccc Q lcl|Aclame:pro 228 A-QKQEDVDTLREAMKSAKGPGNFRNLFMYAPNGKKDGIQLLPVSEVAAKDEFWNIKNVTRDDQLAAHRVPPQLMGIIPN 306 (368) Q Consensus 228 ~-l~~e~~~~~k~~~~~~~g~~n~~~~~~l~~~g~~~g~~~~pl~~~~~d~qf~e~~~~~~~~Ia~~fgVPp~~lg~~~~ 306 (368) . .+++++++++ +++.|..|+|++++| +.|++|++++++++|+||+|++++++++||++|||||++||...+ T Consensus 220 ~~~~~~~~~~~~---~~~~~~~n~g~~~vl-----~~g~~~~~l~~~~~d~q~~e~~~~~~~~Ia~~fgVPp~~lg~~~~ 291 (392) T protein:vir:74 220 GLLSDKDKASRS---RSFMKRSRSGGPVVL-----DDLEEFTALEIKSNVAQLLSQTDWTSKQYAKVYGLPDSYIGGQGD 291 (392) T ss_pred CCchHHHHHHHH---HHHhccccCCCeeec-----CCCceEEEccCChhHHHHHHHHHHHHHHHHHHhCCCHHHhCCCCC Confidence 3 3333433333 334577899999988 678999999999999999999999999999999999999997543 Q ss_pred ccccccCHHHHHHHHHHHHHHHHHHHHH-HHHhhcCcceEeechhhhhcCChhhhhhhhhhcC Q lcl|Aclame:pro 307 NTGGFGDVEKAAMVFARNEVKPLQDRLL-AINDWIGDEVVRFAPYALGGHDQPAAAPGGQRSA 368 (368) Q Consensus 307 ~~~~~sn~e~~~~~f~~~tl~P~~~~ie-~l~~~l~~~~~~F~~~~Llr~D~~~ra~~~~~~~ 368 (368) + ++.+++.+.|++++|.||++.|| +++++|.++ ++||...+++.|.++++....... T Consensus 292 ---~-~~~~e~~~~~~~~~l~p~~~~ie~~l~~~l~~~-~~~~~~~~~~~d~~~~~~~~~~l~ 349 (392) T protein:vir:74 292 ---Q-QSSIQQISGMYASALNRYLRPAISELEYKLSDH-ISVNMRPAIDPLGDNYLSTISTAT 349 (392) T ss_pred ---c-ccHHHHHHHHHHHHHHHHHHHHHHHHHHhccch-hcccchhhhcCCHHHHHHHHHHHH Confidence 2 24456788999999999999998 599998765 789999999999988877654433 No 70 >protein:vir:80796 Length: 574 # NCBI annotation: putative portal protein # Family: family:all:2446 # MgeID: mge:1885 # MgeName: phiEF24C # Cross-refs: genbank:acc:YP_001504121;genbank:gi:158079308;genbank:GeneID:5666445 Probab=100.00 E-value=6.5e-62 Score=356.04 Aligned_cols=357 Identities=14% Similarity=0.111 Sum_probs=240.0 Q ss_pred CCcCCCCccccccccccccc---cCCCcc-hhhccccCceEEEECC---Cc--eeccChHHHHH---------------- Q lcl|Aclame:pro 1 MSRNKTRRAARAASAHVRTA---NTDAPT-EHHTDRAAQAEVFSFG---DP--VEVLDRRELLD---------------- 55 (368) Q Consensus 1 m~~~k~~~~~~~~~~~~~~~---~~~~~~-~~~~~~~~~~~~~~~g---~p--~~~~~~~~~~~---------------- 55 (368) |.++..++............ .....+ +......+. ..|..| .| .+.-+...++. T Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~iv~~~i~~~~ 105 (574) T protein:vir:80 27 MHLREIDTNVVNNEPYSMESIEKGMNGKTTAYMQPIIGE-MSVNPGYKTKPSIRNSQDLHKTLKKFGNNIILNAIINTRS 105 (574) T ss_pred cccchhhhhhhhccCCCHHHHHHhHhhhcccccchhhhh-ccccccccCcCccCCcccHHHHHHhhccChhHHHHHHHHH Confidence 66554322222211111000 000000 000000000 000000 01 11011111111 Q ss_pred --HHHHHhc--cchhcccccHHHHHHHHHhccc---ccchhhhccchHHhh----ccCCCCc-C-HHHHHHHHHhHhhhC Q lcl|Aclame:pro 56 --YVECMRM--GQWYEPPMPWDGLARSFRAAAH---HSSAVYVKRNILVST----FIPHPLL-S-RATFERLVLDWQVFG 122 (368) Q Consensus 56 --~~~~~~~--~~~~~~p~~~~~l~~~~r~~~~---~~~~~~~~~~~~l~~----~~~n~~~-~-~~~~~~~~~~~ll~G 122 (368) +..|++. .+++..|+.++ +.+.. .++.....|+...+. ..+||++ + .+|++.++.+++++| T Consensus 106 ~~V~~~~~~i~~~ia~lp~~i~------~kd~~~~~~~~~~~~~~~l~~ll~~~~~~~nP~~~s~~ef~~~lv~~lll~G 179 (574) T protein:vir:80 106 NQVSMYCKPARNSETGVGYEIR------LKDIEAEPTSHDIANIKRIESFLENTAQFRDPNRDNFTTFCKKLVRATYMYD 179 (574) T ss_pred HHHHHHHHHHHhhhccCceEEE------EeccCCCccchhhhhhhHHHHHHhccCCCCCCccccHHHHHHHHHHHHHhcC Confidence 1112111 22333343321 11111 112233334432221 1345553 3 479999999999999 Q ss_pred CeeEEEEecCCcceEEEEEecccccccccCCC--------eeEEEeCCceEEEEcCccEEEecCCCC---cCCccccchh Q lcl|Aclame:pro 123 NAYLERRENVLGGTIRLDTPLAKYVRRGLDLN--------TYFFVQNWQQPYTFAAGSVFHLQEPDI---NQEVYGLPEY 191 (368) Q Consensus 123 nay~~i~r~~~G~~~~L~~l~p~~v~~~~~~~--------~~~~~~~~~~~~~~~~~dviH~r~~~~---~~~~~G~spi 191 (368) |+|++++|+..|+|++|+||+|.+|++..+.+ .||++..++....|+++||||++.... .+++||+||| T Consensus 180 nayi~i~r~~~G~~~~L~pl~p~~V~v~~d~~~~~~~~~~~y~~~~~g~~~~~~~~~eiih~~~~~~~~~~~~~~G~spi 259 (574) T protein:vir:80 180 QVNFEKVFDKDGNFIKFDTVDPTTIFLATNGEGKLIKNGERFVQVIDNRIVAKFNERELAFAVRNPRADIEVGQYGYPEL 259 (574) T ss_pred CeEEEEEECCCCcEEEEEEEcCceeEEEEcCccccccCceEEEEEeCCceEEEEccccEEEEeccCCCCcccccccccHH Confidence 99999999999999999999999999876543 356677778888999999999986433 3478999999 Q ss_pred hHHHHHHHHHHHHHHHHHHHHhccCCCceeEEeCC-CCccHHHHHHHHHHHHHhc-cccccccccccccCcccccccccc Q lcl|Aclame:pro 192 LSALNATWLNESATLFRRRYYKNGSHAGFILYMTD-AAQKQEDVDTLREAMKSAK-GPGNFRNLFMYAPNGKKDGIQLLP 269 (368) Q Consensus 192 ~~a~~~i~~~~~a~~~~~~~f~ng~~p~gil~~~~-~~l~~e~~~~~k~~~~~~~-g~~n~~~~~~l~~~g~~~g~~~~p 269 (368) .+++.+|.++.++++|+.++|+||++|+|||+++. ..+++++++++++.|++.+ |..|+|+++++. +.|++|+| T Consensus 260 ~~a~~~i~~~~~a~~~~~~~f~ng~~p~gil~~~~~~~ls~e~~~~lk~~~~~~~~G~~n~g~~~vl~----~~G~~~~~ 335 (574) T protein:vir:80 260 EIALKQFIAHENTEVFNDRFFSHGGTTRGILHVKTGQQQSQQALDIFRREWRSSLAGINGSWQIPVVS----AEDVKFVN 335 (574) T ss_pred HHHHHHHHHHHHHHHHHHHHHhccCCCceEEEeCCCCCCCHHHHHHHHHHHHHHhccccccccceeec----CCCceEEE Confidence 99999999999999999999999999999999864 4589999999999998864 568999986663 35799999 Q ss_pred ccchhhHHHHHHHHHHHHHHHHHHhCCChHHhccccccc--------ccccCHHHHHHHHHHHHHHHHHHHHH-HHHhhc Q lcl|Aclame:pro 270 VSEVAAKDEFWNIKNVTRDDQLAAHRVPPQLMGIIPNNT--------GGFGDVEKAAMVFARNEVKPLQDRLL-AINDWI 340 (368) Q Consensus 270 l~~~~~d~qf~e~~~~~~~~Ia~~fgVPp~~lg~~~~~~--------~~~sn~e~~~~~f~~~tl~P~~~~ie-~l~~~l 340 (368) ++++++|+||+|++++++++||++|||||++||+.++.+ .+++|+|++.+.|+++||.||+++|| +||++| T Consensus 336 l~~s~~D~qfle~~~~~~~~Ia~afgVPp~~lG~~~~~t~~gs~~~~~n~sn~E~~~~~f~~~tL~P~~~~ie~~ln~~L 415 (574) T protein:vir:80 336 MTPSANDMQFEKWLNYLINVISALYGIDPAEINFPNNGGATGSKGGSLNEGNSKEKMQASQNKGLQPLLRFIEDTVNTYI 415 (574) T ss_pred ccCChhHHHHHHHHHHHHHHHHHHhCCCHHHhcccccccccccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhh Confidence 999999999999999999999999999999999877543 46789999999999999999999999 489887 Q ss_pred Ccc-----eEeechhhhhcCChhhhhhhhhhcC Q lcl|Aclame:pro 341 GDE-----VVRFAPYALGGHDQPAAAPGGQRSA 368 (368) Q Consensus 341 ~~~-----~~~F~~~~Llr~D~~~ra~~~~~~~ 368 (368) .+. +++|+...+++.|.+.++.....+. T Consensus 416 l~~~~~~~~~~f~~~d~~~~~~~~~~~~~~~~G 448 (574) T protein:vir:80 416 VAEFGEKYQFQFRGGDLSAQLDKLKIIEQEGKV 448 (574) T ss_pred hhhcCCceEEEecccchhhHHHHHHHHHHHhCC Confidence 544 4677766666655555443333222 No 71 >protein:vir:3843 Length: 397 # NCBI annotation: hypothetical protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:322 # MgeName: phi adh # Cross-refs: genbank:acc:NP_050149;swissprot:trembl:q9t1f8;genbank:gi:9633041;uniprot:Q9T1F8;genbank:GeneID:1262206 Probab=100.00 E-value=1.1e-61 Score=354.85 Aligned_cols=330 Identities=11% Similarity=0.052 Sum_probs=256.7 Q ss_pred CCcCCCCccccccccccccccCCCcchhhccccCceEEEECCCceeccChHHHHHHHHHHhccchhcccccHHHHHHHHH Q lcl|Aclame:pro 1 MSRNKTRRAARAASAHVRTANTDAPTEHHTDRAAQAEVFSFGDPVEVLDRRELLDYVECMRMGQWYEPPMPWDGLARSFR 80 (368) Q Consensus 1 m~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~r 80 (368) |+--+..++.. +..+..+..--...........++ +...+...+|.+|+.++. .+++..|+. T Consensus 1 M~~f~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~v~---~~~al~~~~V~~~v~~ia-~~ia~~p~~--------- 62 (397) T protein:vir:38 1 MPLLKLNKSHS-----QGFSLNDPDWVNFLTGGEAQKYVS---ADTALKNSDIFSLIMQLS-GDLAMVRYT--------- 62 (397) T ss_pred Ccchhhhhccc-----CcccCCchhhhhhhcCCcCCceec---hHHhhccHHHHHHHHHHH-HHHhhCccc--------- Confidence 87654322110 001111100000111111111111 233566677777777654 456666652 Q ss_pred hcccccchhhhccchHHhhccCCCCcCH-HHHHHHHHhHhhhCCeeEEEEecCCcceEEEEEecccccccccCCCe---e Q lcl|Aclame:pro 81 AAAHHSSAVYVKRNILVSTFIPHPLLSR-ATFERLVLDWQVFGNAYLERRENVLGGTIRLDTPLAKYVRRGLDLNT---Y 156 (368) Q Consensus 81 ~~~~~~~~~~~~~~~~l~~~~~n~~~~~-~~~~~~~~~~ll~Gnay~~i~r~~~G~~~~L~~l~p~~v~~~~~~~~---~ 156 (368) ..++...++...|||+++. +||+.++.+++++||||++|+|+..|++++|+|++|.+|++..+.++ + T Consensus 63 ---------~~~~~~~~l~~~PN~~~s~~~f~~~~~~~lll~Gna~~~i~r~~~g~~~~l~~l~~~~v~i~~~~~~~~~~ 133 (397) T protein:vir:38 63 ---------SESDRSQSIISNPSVTANGYSFWQGMFAQLLLDGNCYAYRHKNTNGVDLSWEYLRPSQVQPMLLQDGSGLI 133 (397) T ss_pred ---------ccccHHHHHHhcCCCCCCHHHHHHHHHHHhhhcCCEEEEEEECCCCcEEEEEEEcCceeEEEEcCCCceEE Confidence 1234456677889998775 78889999999999999999999999999999999999988765443 4 Q ss_pred EEEe----CCceEEEEcCccEEEecCCCCcCCccccchhhHHHHHHHHHHHHHHHHHHHHhccCCCceeEEeCCCCccHH Q lcl|Aclame:pro 157 FFVQ----NWQQPYTFAAGSVFHLQEPDINQEVYGLPEYLSALNATWLNESATLFRRRYYKNGSHAGFILYMTDAAQKQE 232 (368) Q Consensus 157 ~~~~----~~~~~~~~~~~dviH~r~~~~~~~~~G~spi~~a~~~i~~~~~a~~~~~~~f~ng~~p~gil~~~~~~l~~e 232 (368) |.+. .++..+.|+++||||++.+++.+.+||+||+.++..+|.++.++++|..++|+||++|+|+|+++. .++++ T Consensus 134 y~~~~~~~~~~~~~~~~~~eiih~~~~~~~~~~~G~s~i~~~~~~i~~~~~~~~~~~~~f~ng~~~~~il~~~~-~~~~e 212 (397) T protein:vir:38 134 YNINFDEPAIGYMENVPAADVIHIRLLSKNGGKTGISPLSALINEQQIKDASNELTLKALKQSVTASAVLTIQK-GGLLD 212 (397) T ss_pred EEEEeccccccceeEecCccEEEecCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHHhccCCccEEEEeCC-CCCHH Confidence 4443 245668899999999999988778899999999999999999999999999999999999999876 58899 Q ss_pred HHHHHHHHHHHhccccccccccccccCccccccccccccchhhHHHHHHHHHHHHHHHHHHhCCChHHhccccccccccc Q lcl|Aclame:pro 233 DVDTLREAMKSAKGPGNFRNLFMYAPNGKKDGIQLLPVSEVAAKDEFWNIKNVTRDDQLAAHRVPPQLMGIIPNNTGGFG 312 (368) Q Consensus 233 ~~~~~k~~~~~~~g~~n~~~~~~l~~~g~~~g~~~~pl~~~~~d~qf~e~~~~~~~~Ia~~fgVPp~~lg~~~~~~~~~s 312 (368) +.+++++.|+..+++.|+|+++++ +.|++|++++.++.|+||+|.+++++++||++|||||++||..++ +++ T Consensus 213 ~~~~~~~~~~~~~~~~n~~~~~vl-----~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~afgVp~~~lg~~~~---~~~ 284 (397) T protein:vir:38 213 AETRIARSKEISKQIHNSDGPVVI-----DALEDYKPLEVKGNIASLLNQVDWTRDQIAKVYGVPDSYLNGQGD---QQS 284 (397) T ss_pred HHHHHHHHHHHHhcccccCCceec-----CCCceEEecCCChhHHHHHHHHHHHHHHHHHHhCCCHHHhCCCCC---ccc Confidence 999999999998888999999988 578999999999999999999999999999999999999997543 346 Q ss_pred CHHHHHHHHHHHHHHHHHHHHH-HHHhhcCcceEeechhhhhcCChhhhhhhhhhcC Q lcl|Aclame:pro 313 DVEKAAMVFARNEVKPLQDRLL-AINDWIGDEVVRFAPYALGGHDQPAAAPGGQRSA 368 (368) Q Consensus 313 n~e~~~~~f~~~tl~P~~~~ie-~l~~~l~~~~~~F~~~~Llr~D~~~ra~~~~~~~ 368 (368) |+|++ ..|+.+||.|+++.|| ++|++|.++ ++|+...++++|.+++++..++.. T Consensus 285 ~~e~~-~~~~~~~l~P~~~~ie~~ln~~l~~~-~~~~~~~~~~~d~~~~~~~~~~~~ 339 (397) T protein:vir:38 285 SITQI-SGQYAKSLNRYVQAIVGELNDKLHAN-ISANIRFAIDAMGDQYASTISSSV 339 (397) T ss_pred HHHHH-HHHHHHHHHHHHHHHHHHHHHhccCh-hcccccccccCCHHHHHHHHHHHH Confidence 77766 5577899999999998 599988765 568888899999999999777665 No 72 >protein:vir:96579 Length: 576 # NCBI annotation: ORF012 # Family: family:all:2446 # MgeID: mge:1623 # MgeName: Twort # Cross-refs: genbank:acc:YP_238542;genbank:gi:66391267;genbank:GeneID:5130361 Probab=100.00 E-value=5e-62 Score=356.64 Aligned_cols=350 Identities=14% Similarity=0.076 Sum_probs=231.6 Q ss_pred CCcCC----CCccccccccccccccCCCcchhhccccCceEEEECCCceeccChHH-------------HHHHHHHHhcc Q lcl|Aclame:pro 1 MSRNK----TRRAARAASAHVRTANTDAPTEHHTDRAAQAEVFSFGDPVEVLDRRE-------------LLDYVECMRMG 63 (368) Q Consensus 1 m~~~k----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~p~~~~~~~~-------------~~~~~~~~~~~ 63 (368) |+..+ ...|...+++ +....|..... .+... +.. .|.......+ +..|+.++. . T Consensus 35 ~~~~~~~~~~~~~~~~~~~----~a~~~p~~~~~--~~~~~-~~~-~p~~~~~~~~~~~~l~~~~~npiv~~~I~~ia-~ 105 (576) T protein:vir:96 35 IRNIEEKSKELNKSLYGKQ----QAYAEPFLEVM--DTNPE-FRT-KRSYMKNSDNLHDVLKQFGNNPILNAIILTRS-N 105 (576) T ss_pred HHHhhhhhhhhccccCCcc----chhhcceeeee--ecCCC-ccc-cCcchhhhhhhHHHHHHhhcCHHHHHHHHHHH-H Confidence 33332 2222211111 11111100000 00000 100 1222111111 222332221 1 Q ss_pred chhcccccHHHHHHHHHhcc---------ccc---chhhhcc--chHHh--hccCCCC--cCHHHHHHHHHhHhhhCCee Q lcl|Aclame:pro 64 QWYEPPMPWDGLARSFRAAA---------HHS---SAVYVKR--NILVS--TFIPHPL--LSRATFERLVLDWQVFGNAY 125 (368) Q Consensus 64 ~~~~~p~~~~~l~~~~r~~~---------~~~---~~~~~~~--~~~l~--~~~~n~~--~~~~~~~~~~~~~ll~Gnay 125 (368) .++..+.. ..+.+... .+. ......+ ...+. ...+||+ +..+|++.++.+++++||+| T Consensus 106 ~vA~~~~~----~~~~~~~~~~~i~lk~~~~~~~~~~~~~~~~l~~~l~~~~~~~~p~~~t~~~f~~~lv~dlll~Gna~ 181 (576) T protein:vir:96 106 QVAMYCQP----SRYNERGLGFEVRMRDLDAEPGKKEKEEIKRIENFILNTGRDKDIDRDSFQSFCRKIVRDTYTYDQVN 181 (576) T ss_pred HHHhhhhh----hhhccccccceeEEecCcCccchhhhHhhhhHHhhHhhccCCCCCccccHHHHHHHHHHHHHhcCCeE Confidence 12211110 00000000 000 0000001 11122 1234554 33579999999999999999 Q ss_pred EEEEe--cCCcceEEEEEecccccccccCCCe--------eEEEeCCceEEEEcCccEEEecC-CCC--cCCccccchhh Q lcl|Aclame:pro 126 LERRE--NVLGGTIRLDTPLAKYVRRGLDLNT--------YFFVQNWQQPYTFAAGSVFHLQE-PDI--NQEVYGLPEYL 192 (368) Q Consensus 126 ~~i~r--~~~G~~~~L~~l~p~~v~~~~~~~~--------~~~~~~~~~~~~~~~~dviH~r~-~~~--~~~~~G~spi~ 192 (368) +++++ ++.|++++|+||+|.+|++..+.++ |+++..++....|.++||||++. +.+ ..+.||+|||. T Consensus 182 ~~i~~~rd~~g~~~~L~pl~p~~V~v~~~~dg~~~~~~~~~~~~~~~~~~~~~~~~dii~~~~~~~~d~~~~~~G~Spi~ 261 (576) T protein:vir:96 182 FEKVFNKKNATTMDKFIAVDPSTIFYATDKNGKIIKGGKRFVQVINKKVVASFTSREMAMGIRNPRTELSSSGYGLSEVE 261 (576) T ss_pred EEEEEecCCCCceEEEEEeCCceeEEEECCCCceeeeeeEEEEecCCceEEEecccceEEEeecCCCCcccCcccccHHH Confidence 99885 5568899999999999999877654 23344566678899999987753 332 23789999999 Q ss_pred HHHHHHHHHHHHHHHHHHHHhccCCCceeEEeCC-CCccHHHHHHHHHHHHHh-ccccccccc-cccccCcccccccccc Q lcl|Aclame:pro 193 SALNATWLNESATLFRRRYYKNGSHAGFILYMTD-AAQKQEDVDTLREAMKSA-KGPGNFRNL-FMYAPNGKKDGIQLLP 269 (368) Q Consensus 193 ~a~~~i~~~~~a~~~~~~~f~ng~~p~gil~~~~-~~l~~e~~~~~k~~~~~~-~g~~n~~~~-~~l~~~g~~~g~~~~p 269 (368) +++.+|.++.++++|+.++|+||++|+|||++++ ..+++++++++++.|++. .|..|+|++ +++ +.|++|+| T Consensus 262 ~a~~~i~~~~~~~~~~~~~f~Ng~~p~giL~~~~~~~ls~e~~~~lr~~~~~~~~G~~nag~~p~vl-----~~G~~~~~ 336 (576) T protein:vir:96 262 IAMKQFIAYNNTETFNDRFFSHGGTTRGILQIKSEQQQSQRALENFKREWKSSFSGINGSWQVPVVM-----ADDIKFVN 336 (576) T ss_pred HHHHHHHHHHHHHHHHHHHHhccCCCceEEEeCCCCCCCHHHHHHHHHHHHHHhccccccccceeec-----CCCceEEe Confidence 9999999999999999999999999999999875 468999999999999875 466899995 555 57899999 Q ss_pred ccchhhHHHHHHHHHHHHHHHHHHhCCChHHhccccccc---------ccccCHHHHHHHHHHHHHHHHHHHHHH-HHhh Q lcl|Aclame:pro 270 VSEVAAKDEFWNIKNVTRDDQLAAHRVPPQLMGIIPNNT---------GGFGDVEKAAMVFARNEVKPLQDRLLA-INDW 339 (368) Q Consensus 270 l~~~~~d~qf~e~~~~~~~~Ia~~fgVPp~~lg~~~~~~---------~~~sn~e~~~~~f~~~tl~P~~~~ie~-l~~~ 339 (368) ++++++|+||+|++++++++||++|||||++||+.+..+ .+|+|+|++.+.|+++||.||+++||+ ||++ T Consensus 337 ls~~~~d~qfle~~~~~~~~Ia~afgVPp~~lG~~~~~~~~g~~~~~s~t~sn~e~~~~~f~~~tL~P~~~~ie~~ln~~ 416 (576) T protein:vir:96 337 MTPTANDMQFEKWLTYLINIISALYGIDPAEIGFPNRGGATGGKGGNTLNEADPGKKQQQSQNKGLQPLLRFIEDLINTH 416 (576) T ss_pred ccCChhhHHHHHHHHHhHHHHHHHhCCCHHHccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHhh Confidence 999999999999999999999999999999999876542 378999999999999999999999995 9998 Q ss_pred cCcceEeechhhhhcCChhhhhhhhhhcC Q lcl|Aclame:pro 340 IGDEVVRFAPYALGGHDQPAAAPGGQRSA 368 (368) Q Consensus 340 l~~~~~~F~~~~Llr~D~~~ra~~~~~~~ 368 (368) |.+.+.......++++|.+++++..+..- T Consensus 417 Ll~~~~~~~~~~f~r~d~~~~~e~~~~~~ 445 (576) T protein:vir:96 417 IISEYSDKYVFQFVGGDTKSELDKIKILQ 445 (576) T ss_pred hchhccCceEEEeccCCHHHHHHHHHHHH Confidence 87654222222378999999988665321 No 73 >protein:vir:100882 Length: 383 # NCBI annotation: putative portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:1473 # MgeName: Lc-Nu # Cross-refs: genbank:acc:YP_358762;genbank:gi:78000027;genbank:GeneID:3726153 Probab=100.00 E-value=2.1e-61 Score=353.23 Aligned_cols=334 Identities=12% Similarity=0.102 Sum_probs=253.7 Q ss_pred CCcCCCC-ccccccccccccccCCCcchhhccccCceEEEECCCceeccChHHHHHHHHHHhccchhcccccHHHHHHHH Q lcl|Aclame:pro 1 MSRNKTR-RAARAASAHVRTANTDAPTEHHTDRAAQAEVFSFGDPVEVLDRRELLDYVECMRMGQWYEPPMPWDGLARSF 79 (368) Q Consensus 1 m~~~k~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~ 79 (368) |..-..+ ..++..+..... ........... ......+ .+..++...++..|+.++. +.++..|+... T Consensus 1 Mg~~~~~~~~k~~~~~~~~~-~~~~~~~~~~~-~~~~~~v---~~~~~l~~~~v~~~i~~ia-~~ia~~~~~~~------ 68 (383) T protein:vir:10 1 MGLLTPKNFSKRNAKNMVYP-SNPAFFTTTVG-GMQLSYV---SALSALQNTNVYSVINRIA-SDVSSAHFKTE------ 68 (383) T ss_pred CCcccccccccccccccccc-cchhhhhhhcc-Ccccccc---chhHhhcchHHHHHHHHHH-HhhccCceeec------ Confidence 5443211 111111100000 00000100000 0001111 1334555666777776554 45666665321 Q ss_pred HhcccccchhhhccchHHhhccCCCCcCH-HHHHHHHHhHhhhCCeeEEEEecCCcceEEEEEecccccccccCCCe-eE Q lcl|Aclame:pro 80 RAAAHHSSAVYVKRNILVSTFIPHPLLSR-ATFERLVLDWQVFGNAYLERRENVLGGTIRLDTPLAKYVRRGLDLNT-YF 157 (368) Q Consensus 80 r~~~~~~~~~~~~~~~~l~~~~~n~~~~~-~~~~~~~~~~ll~Gnay~~i~r~~~G~~~~L~~l~p~~v~~~~~~~~-~~ 157 (368) +|+..-+...|||+++. +|++.++.++++.||||++++|+ +++++|+++.+|++..+.++ +| T Consensus 69 ------------~~~~~~ll~~PN~~~t~~~f~~~~~~~l~l~Gn~~~~i~~~----~~~~~p~~~~~v~~~~~~~~~~~ 132 (383) T protein:vir:10 69 ------------NTATLNRLESPSSLIGRFSFWQGALMQLCLSGNDYIPLVGQ----NLEHIPNSDVQINYLPGNMGIVY 132 (383) T ss_pred ------------ccchhhhhhCCCCCCCHHHHHHHHHHHhhhcCCeEEEEEcC----ceeEeecCcceEEEEEcCCceEE Confidence 23323334579998775 78889999999999999999875 57899999999988776654 22 Q ss_pred --EEeCCceEEEEcCccEEEecCCCC--cCCccccchhhHHHHHHHHHHHHHHHHHHHHhccCCCceeEEeCCCCccHHH Q lcl|Aclame:pro 158 --FVQNWQQPYTFAAGSVFHLQEPDI--NQEVYGLPEYLSALNATWLNESATLFRRRYYKNGSHAGFILYMTDAAQKQED 233 (368) Q Consensus 158 --~~~~~~~~~~~~~~dviH~r~~~~--~~~~~G~spi~~a~~~i~~~~~a~~~~~~~f~ng~~p~gil~~~~~~l~~e~ 233 (368) ....++..++|+++||||||.+++ .++++|+||+.++..+|..+.++++++.++|+||++|+|||++++...++|+ T Consensus 133 ~~~~~~~~~~~~~~~~evih~r~~~~~~~~~~~G~s~l~~~~~~i~~~~~~~~~~~~~f~ng~~~~~il~~~~~~~~~e~ 212 (383) T protein:vir:10 133 TVLESNDRPKMVLRQDQMLHFRLMPDPQYRYLIGRSPLESLQNALNLDDKASKSNMSAMENQINPAGKLTISNYLSDGKD 212 (383) T ss_pred EEEEcCCceEEEEcccceEEeccCCCCcccccccccHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEeCCCCCCHHH Confidence 334567788999999999997654 3578999999999999999999999999999999999999999876668999 Q ss_pred HHHHHHHHHHhccccccccccccccCccccccccccccchhhHHHHH-HHHHHHHHHHHHHhCCChHHhccccccccccc Q lcl|Aclame:pro 234 VDTLREAMKSAKGPGNFRNLFMYAPNGKKDGIQLLPVSEVAAKDEFW-NIKNVTRDDQLAAHRVPPQLMGIIPNNTGGFG 312 (368) Q Consensus 234 ~~~~k~~~~~~~g~~n~~~~~~l~~~g~~~g~~~~pl~~~~~d~qf~-e~~~~~~~~Ia~~fgVPp~~lg~~~~~~~~~s 312 (368) ++++++.|++.+++.|+|+++++ +.|++|++++++++|+||+ |++++++++||++|||||++||..+.++++++ T Consensus 213 ~~~~~~~~~~~~~~~n~~~~~vl-----~~g~~~~~l~~~~~d~~~l~e~~~~~~~~Ia~afgVPp~~lg~~~~~~~~~s 287 (383) T protein:vir:10 213 LESAREEFEKANTGDNSGRLMVL-----PDGFDYTQLEMKTDVFKALADNSAYSADQISKAFGVPSDILGGGTSTESQHS 287 (383) T ss_pred HHHHHHHHHHHhCccccCCcccc-----CCCceEEecCCChhHHHHHHHHHHHHHHHHHHHhCCCHHHcCCccCCCCccc Confidence 99999999998888999999998 6789999999999999986 99999999999999999999998776678999 Q ss_pred CHHHHHHHHHHHHHHHHHHHHHH-HHhhcCcceEeechhhhhcCChhhhhhhhhhcC Q lcl|Aclame:pro 313 DVEKAAMVFARNEVKPLQDRLLA-INDWIGDEVVRFAPYALGGHDQPAAAPGGQRSA 368 (368) Q Consensus 313 n~e~~~~~f~~~tl~P~~~~ie~-l~~~l~~~~~~F~~~~Llr~D~~~ra~~~~~~~ 368 (368) |+||++..|. .+|.|+++.||+ ++++|....++||.+.|+++|.+++++..++.. T Consensus 288 n~eq~~~~~~-~~l~P~~~~ie~~l~~~l~~~~~~f~~~~l~~~d~~~~~~~~~~~~ 343 (383) T protein:vir:10 288 NIDQIKATYL-ANLNSYVNPIVDELRLKMNAPDLELDIKDMLDVDDSILINQVSNLA 343 (383) T ss_pred cHHHHHHHHH-HHHHHHHHHHHHHHHHhhCCceEEeechhhhccCHHHHHHHHHHHH Confidence 9999987665 699999999985 999998788999999999999999999777665 No 74 >protein:vir:4995 Length: 384 # NCBI annotation: putative portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:109 # MgeName: Sfi21 # Cross-refs: genbank:acc:NP_049969;genbank:gi:9632941;genbank:GeneID:1262104 Probab=100.00 E-value=1.6e-61 Score=353.92 Aligned_cols=338 Identities=10% Similarity=0.057 Sum_probs=254.0 Q ss_pred CCcCCCCccccccccccccccCCCcchhhccccCceEEEECCCceeccChHHHHHHHHHHhccchhcccccHHHHHHHHH Q lcl|Aclame:pro 1 MSRNKTRRAARAASAHVRTANTDAPTEHHTDRAAQAEVFSFGDPVEVLDRRELLDYVECMRMGQWYEPPMPWDGLARSFR 80 (368) Q Consensus 1 m~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~r 80 (368) |..-+.+.+++...............+...+...+...+ .+.+.+...+|+.|+..+. ..++..|+... T Consensus 1 Mglf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v---~~~~al~~~~V~~~i~~Ia-~~ia~l~~~~~------- 69 (384) T protein:vir:49 1 MPIFNITNLATESPPSNQDSFFDITDPEFLDALNGSEWV---SAETALKNSDLFSIISQLS-NDLATAKITTS------- 69 (384) T ss_pred CccccccccCcccccccchhhccccchhhcccccCCcee---chhhhhccHHHHHHHHHHH-HHHhhCceeee------- Confidence 887544333322221111111111111111111111111 1233455666777766553 45677776532 Q ss_pred hcccccchhhhccchHHhhccCCCCcCH-HHHHHHHHhHhhhCCeeEEEEecCCcceEEEEEecccccccccCCC---ee Q lcl|Aclame:pro 81 AAAHHSSAVYVKRNILVSTFIPHPLLSR-ATFERLVLDWQVFGNAYLERRENVLGGTIRLDTPLAKYVRRGLDLN---TY 156 (368) Q Consensus 81 ~~~~~~~~~~~~~~~~l~~~~~n~~~~~-~~~~~~~~~~ll~Gnay~~i~r~~~G~~~~L~~l~p~~v~~~~~~~---~~ 156 (368) ++....+...|||+++. +|++.++.+++++||||++++|+..|+|++|+|++|.+|++....+ .+ T Consensus 70 -----------~~~~~~l~~~PN~~~t~~~f~~~l~~~lll~Gna~~~i~r~~~g~~~~L~~l~~~~v~v~~~~~~~~~~ 138 (384) T protein:vir:49 70 -----------RKQLQGIVDNPSNNANRFNFYQSIFAQMLLGGEAFAYRWRNENGRDMKWEYLRPSQVSFNRLDNQNGLY 138 (384) T ss_pred -----------cchhhhhhhccCCCCCHHHHHHHHHHHhhhcCCeEEEEEECCCCcEEEEEEEcCceeEEEEcCCCceEE Confidence 11222345689998775 7888899999999999999999999999999999999999866433 24 Q ss_pred EEEeC----CceEEEEcCccEEEecCCCCcCCccccchhhHHHHHHHHHHHHHHHHHHHHhccCCCceeEEeCCCCccHH Q lcl|Aclame:pro 157 FFVQN----WQQPYTFAAGSVFHLQEPDINQEVYGLPEYLSALNATWLNESATLFRRRYYKNGSHAGFILYMTDAAQKQE 232 (368) Q Consensus 157 ~~~~~----~~~~~~~~~~dviH~r~~~~~~~~~G~spi~~a~~~i~~~~~a~~~~~~~f~ng~~p~gil~~~~~~l~~e 232 (368) |.+.. .+..+.|+++||||++.+++.+.++|+||+.+++.+|+++.++++|..++|+||++|++||++++.. +++ T Consensus 139 y~~~~~~~~~~~~~~~~~~eVih~~~~~~~~~~~G~s~i~~~~~~i~~~~~~~~~~~~~~~ng~~~~~il~~~~~~-~~~ 217 (384) T protein:vir:49 139 YNITFDDPRIPPKQHVPQGDILHFRLLSVDGGLTSVSPLMALGRELNIQKASDKLTLNALKNALNANGILKIKGGG-LLD 217 (384) T ss_pred EEEEecCccccceeEecCccEEEecCCCCCCceeeccHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEeCCCC-ChH Confidence 44442 3456889999999999998877799999999999999999999999999999999999999998754 444 Q ss_pred HHHHHHHHHHHhccccccccccccccCccccccccccccchhhHHHHHHHHHHHHHHHHHHhCCChHHhccccccccccc Q lcl|Aclame:pro 233 DVDTLREAMKSAKGPGNFRNLFMYAPNGKKDGIQLLPVSEVAAKDEFWNIKNVTRDDQLAAHRVPPQLMGIIPNNTGGFG 312 (368) Q Consensus 233 ~~~~~k~~~~~~~g~~n~~~~~~l~~~g~~~g~~~~pl~~~~~d~qf~e~~~~~~~~Ia~~fgVPp~~lg~~~~~~~~~s 312 (368) +.+ ++.++.+.|.+|+|+++++ +.|++|++++++++|+||+|.+++++++||++|||||++||...+++++++ T Consensus 218 ~~~--~~~~~~~~~~~n~~~~~vl-----~~g~~~~~l~~~~~d~q~~e~~~~~~~~Ia~~fgVp~~~lg~~~~~~~~~~ 290 (384) T protein:vir:49 218 FKT--KQSRSRQAMKQMQGGPLVL-----DDLEDFTPLEIKSNVAQLLSQADWTTGQFAKVYGIPESVVGGEGDKQSSLE 290 (384) T ss_pred HHH--HHHHHHHhcccCCccceec-----CCCceEEEccCChhhHHHHHHHHHHHHHHHHHhCCCHHHhCCCCCccccHH Confidence 432 3334456678999999988 678999999999999999999999999999999999999998777778899 Q ss_pred CHHHHHHHHHHHHHHHHHHHHHH-HHhhcCc----------ceEeechhhhhcCChhhhhhhhhhcC Q lcl|Aclame:pro 313 DVEKAAMVFARNEVKPLQDRLLA-INDWIGD----------EVVRFAPYALGGHDQPAAAPGGQRSA 368 (368) Q Consensus 313 n~e~~~~~f~~~tl~P~~~~ie~-l~~~l~~----------~~~~F~~~~Llr~D~~~ra~~~~~~~ 368 (368) +++++...|++.+|.||+..|++ ++.+|.. .+++|+.+.|+++|.+++++..+... T Consensus 291 ~~~~~~~~~i~~~l~pi~~~i~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~t~~e~~~~l~ 357 (384) T protein:vir:49 291 MIYNIYFKAVSRFLRPFVSELSKKLSCEVDADILPAVDPTGSNYIGLINSMVKTGTLAQNQGLYVLQ 357 (384) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhchhhhhhhhhhhhccchHHHHHHHHHhhcCcccHHHHHHHHh Confidence 99999999999999999999984 7766521 24789999999999999999766543 No 75 >protein:vir:9359 Length: 348 # NCBI annotation: head portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:166 # MgeName: phi 12 # Cross-refs: genbank:acc:NP_803337;genbank:gi:29028648;genbank:GeneID:1258089 Probab=100.00 E-value=4.4e-61 Score=351.49 Aligned_cols=280 Identities=13% Similarity=0.143 Sum_probs=234.5 Q ss_pred hhcccccHHHHHHHHHhcccccchhhhccch-HHhhccCCCCcCH-HHHHHHHHhHhhhCCeeEEEEecCCcceEEEEEe Q lcl|Aclame:pro 65 WYEPPMPWDGLARSFRAAAHHSSAVYVKRNI-LVSTFIPHPLLSR-ATFERLVLDWQVFGNAYLERRENVLGGTIRLDTP 142 (368) Q Consensus 65 ~~~~p~~~~~l~~~~r~~~~~~~~~~~~~~~-~l~~~~~n~~~~~-~~~~~~~~~~ll~Gnay~~i~r~~~G~~~~L~~l 142 (368) ++..|+.+. +.. ...+|+. .++..+|||+++. +||+.++.+++++||||++|+|+..|+|++|+|+ T Consensus 1 ia~lp~~~~------~~~------~~~~~~l~~lL~~~PN~~~t~~~f~~~~~~~l~l~Gna~~~i~r~~~G~~~~L~~l 68 (348) T protein:vir:93 1 MASLPLKMY------EDY------KVVNTEVSDLLTVSPNNSLSSFDFINQIETIRNEKGNAYVLIERDIYHQPSKLFLL 68 (348) T ss_pred CcccceEeE------ecC------cCcccHHHHHHHhCCCCCCCHHHHHHHHHHHHhhcCCeEEEEEECCCCcEEEEEEE Confidence 777787542 211 1234553 3555789998775 7888999999999999999999999999999999 Q ss_pred cccccccccCCCe----eEEEeCCceEEEEcCccEEEecCCCCcCCccccchhhHHHHHHHHHHHHHHHHHHHHhccCCC Q lcl|Aclame:pro 143 LAKYVRRGLDLNT----YFFVQNWQQPYTFAAGSVFHLQEPDINQEVYGLPEYLSALNATWLNESATLFRRRYYKNGSHA 218 (368) Q Consensus 143 ~p~~v~~~~~~~~----~~~~~~~~~~~~~~~~dviH~r~~~~~~~~~G~spi~~a~~~i~~~~~a~~~~~~~f~ng~~p 218 (368) +|..|++..+.++ |.+...+|..++|+++||||||++++.++++|+||+.+++.++.++.++++++ ++.++..+ T Consensus 69 ~~~~v~~~~~~~~~~~~y~~~~~~g~~~~~~~~eiih~r~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~--~~~~~~~~ 146 (348) T protein:vir:93 69 NPDVVEMLIENQSRELYYSIHAATGNKLIVHNMDMLHFKHIVASNMVQGISPIDVLKNTTDFDNAVRTFN--LTEMQKPD 146 (348) T ss_pred cCCceEEEEeCCCcEEEEEEEcCCCeEEEEccccEEEecCCCCCCceeeccHHHHHHHHHHHHHHHHHHH--HHhcCCCc Confidence 9999998765543 33444567888999999999999888899999999999999999999999986 44444445 Q ss_pred ceeEEeCCCCccHHHHHHHHHHHHHhccccccccccccccCccccccccccccchhhHHHHHHHHHHHHHHHHHHhCCCh Q lcl|Aclame:pro 219 GFILYMTDAAQKQEDVDTLREAMKSAKGPGNFRNLFMYAPNGKKDGIQLLPVSEVAAKDEFWNIKNVTRDDQLAAHRVPP 298 (368) Q Consensus 219 ~gil~~~~~~l~~e~~~~~k~~~~~~~g~~n~~~~~~l~~~g~~~g~~~~pl~~~~~d~qf~e~~~~~~~~Ia~~fgVPp 298 (368) +++++. +..+++|+++++++.|++.+ +|+++++++ +.|++|+|++++++|+||+|++++++++||++||||| T Consensus 147 ~~i~~~-~~~l~~e~~~~~~~~~~~~~--~n~~~~~vl-----~~g~~~~~l~~~~~d~q~~e~~~~~~~~Ia~~fgVP~ 218 (348) T protein:vir:93 147 SFMLKY-GSNVSTEKRQQVLEDFKQYY--EENGGILFQ-----EPGVEIEPLPKKYVSEDIVASENLTRERVANVFQLPS 218 (348) T ss_pred eeEEec-CCCCCHHHHHHHHHHHHHHh--hcCCCeeec-----CCCceEEEcCCChhHHHHHHHHHHHHHHHHHHhCCCH Confidence 666665 45799999999999998876 477888887 5789999999999999999999999999999999999 Q ss_pred HHhcccccccccccCHHHHHHHHHHHHHHHHHHHHH-HHHhhcCc-------ceEeechhhhhcCChhhhhhhhhhcC Q lcl|Aclame:pro 299 QLMGIIPNNTGGFGDVEKAAMVFARNEVKPLQDRLL-AINDWIGD-------EVVRFAPYALGGHDQPAAAPGGQRSA 368 (368) Q Consensus 299 ~~lg~~~~~~~~~sn~e~~~~~f~~~tl~P~~~~ie-~l~~~l~~-------~~~~F~~~~Llr~D~~~ra~~~~~~~ 368 (368) ++||... +++|+|+|++.+.|+++||.|+++.|| +||++|.+ .+++||.+.|+++|.++||+..++.- T Consensus 219 ~~lg~~~--~~~~~~~e~~~~~~~~~~l~P~~~~ie~~l~~~l~~~~~~~~g~~i~fd~~~l~~~d~~~~a~~~~~~~ 294 (348) T protein:vir:93 219 IFLNARS--NTNFAKNEELNRFYLQHTLLPIVKQYEEEFNRKLLTKTDREKNRYFKFNVKSYLRADSATQAEVYFKAV 294 (348) T ss_pred HHhCCCC--CCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCcccccCcceEEeechhhhccCHHHHHHHHHHHH Confidence 9999754 468999999999999999999999998 59988743 25899999999999999999777654 No 76 >protein:vir:3153 Length: 467 # NCBI annotation: capsid protein # Family: family:all:1379 # ACLAME annotation(s): phi:0000161 - phage head/capsid # MgeID: mge:316 # MgeName: PhiCh1 # Cross-refs: genbank:acc:NP_665924;genbank:gi:22091110;genbank:GeneID:951257 Probab=100.00 E-value=5.8e-61 Score=350.82 Aligned_cols=321 Identities=12% Similarity=0.137 Sum_probs=248.2 Q ss_pred eEEEECCCceeccChHHHHHHHHHHhccchhcccccHHHHHHHHHhcccccc-hhhhccchHHhhccCCCCcC------- Q lcl|Aclame:pro 36 AEVFSFGDPVEVLDRRELLDYVECMRMGQWYEPPMPWDGLARSFRAAAHHSS-AVYVKRNILVSTFIPHPLLS------- 107 (368) Q Consensus 36 ~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~r~~~~~~~-~~~~~~~~~l~~~~~n~~~~------- 107 (368) +.-+ +-...++..|+.++. ..++..|+.+..... ....... .........++...||+.++ T Consensus 1 l~~l-------~~~n~~v~~ci~~ia-~~ia~~p~~i~~~~~---~~~~~~~~~~~~~~~~~l~~~~pn~~~~~~~~~~~ 69 (467) T protein:vir:31 1 MAEL-------LEHNETHAKCVHAKS-RYVAGFGINIIPHPE---AEDPDRDGEQYERVWDFWFGDDSNWQVGPMESERA 69 (467) T ss_pred Chhh-------hhcCHHHHHHHHHHH-HhhhcCCeEEEEccC---cccccchhhhhhhHHHHhhccCCCccccchhhHhh Confidence 1111 112345666776654 567777876422110 0000111 11111122345556676443 Q ss_pred --HHHHHHHHHhHhhhCCeeEEEEecCCcceEEEEEecccccccccCCCeeEEE-------------------------- Q lcl|Aclame:pro 108 --RATFERLVLDWQVFGNAYLERRENVLGGTIRLDTPLAKYVRRGLDLNTYFFV-------------------------- 159 (368) Q Consensus 108 --~~~~~~~~~~~ll~Gnay~~i~r~~~G~~~~L~~l~p~~v~~~~~~~~~~~~-------------------------- 159 (368) .+||+.++.+++++||||++++|+..|+|++|+||+|.+|++..+...|+.. T Consensus 70 t~~~~~~~~~~~l~l~Gn~~i~~~r~~~G~~~~l~~l~~~~v~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (467) T protein:vir:31 70 TATNVLQTAWTDYEAIGWLTIEILTQTDGTPTGLAYVPGHTIRKRMDERGFVQLLEEKEKYFGVAGDRYQTNGNGDLDPV 149 (467) T ss_pred HHHHHHHHHHHHHHhcCCeEEEEEECCCCcEEEEEEeCCceeEeeeecceeEeecCCceeeEEeccccceeecccceeee Confidence 3677889999999999999999999999999999999999887665432111 Q ss_pred ------eCCceEEEEcCccEEEecCCCCcCCccccchhhHHHHHHHHHHHHHHHHHHHHhccCCCceeEEeCCCCccHHH Q lcl|Aclame:pro 160 ------QNWQQPYTFAAGSVFHLQEPDINQEVYGLPEYLSALNATWLNESATLFRRRYYKNGSHAGFILYMTDAAQKQED 233 (368) Q Consensus 160 ------~~~~~~~~~~~~dviH~r~~~~~~~~~G~spi~~a~~~i~~~~~a~~~~~~~f~ng~~p~gil~~~~~~l~~e~ 233 (368) ...+..+.++++||||+|.+++.+++||+||+.+++.+|.++.++++|+.++|+||++|+|||++++..+++++ T Consensus 150 ~~~~~~~~~~~~~~~~~~diih~r~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~f~ng~~p~gil~~~~~~l~~e~ 229 (467) T protein:vir:31 150 FVDADDGSTGTSVSNPANELIFKRNHSPLYPHYGAPDIIPAVKTIRGDSAAQDYNIDFFENDGVPRIAIIVKGAELTEKG 229 (467) T ss_pred eeeeccccccceeEeccccEEEecCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEecCcCCCHHH Confidence 01345667899999999999988999999999999999999999999999999999999999998887899999 Q ss_pred HHHHHHHHHHhc------------cccccccccccccCcc--ccccccccccc-hhhHHHHHHHHHHHHHHHHHHhCCCh Q lcl|Aclame:pro 234 VDTLREAMKSAK------------GPGNFRNLFMYAPNGK--KDGIQLLPVSE-VAAKDEFWNIKNVTRDDQLAAHRVPP 298 (368) Q Consensus 234 ~~~~k~~~~~~~------------g~~n~~~~~~l~~~g~--~~g~~~~pl~~-~~~d~qf~e~~~~~~~~Ia~~fgVPp 298 (368) .+++++.|++.+ |..|+++++++..+.+ ..+++++|++. +++|+||+|++++++++||++||||| T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~g~~n~~~~~~l~~g~~~~~~~~~~~~ls~~~~~d~qf~e~~~~~~~~Ia~~fgVpp 309 (467) T protein:vir:31 230 REEMRNLIEDNNEDNHRTAFIETEKIVQNEDYLNLADGADRSDVEIRLEPLTVGIDEEASFLEFRGRNEHDILKVHDVPP 309 (467) T ss_pred HHHHHHHHHhhhcchhhhhhhhhcccccccccccccCCCcccccceeEEeccccChhhHHHHHHHHHHHHHHHHHhCCCH Confidence 999999998644 4578899988865543 34678888864 68899999999999999999999999 Q ss_pred HHhcccccccccccCHHHHHHHHHHHHHHHHHHHHHH-HHhhcCc-------ceEeechhhhhcCChhhhhhhhhhcC Q lcl|Aclame:pro 299 QLMGIIPNNTGGFGDVEKAAMVFARNEVKPLQDRLLA-INDWIGD-------EVVRFAPYALGGHDQPAAAPGGQRSA 368 (368) Q Consensus 299 ~~lg~~~~~~~~~sn~e~~~~~f~~~tl~P~~~~ie~-l~~~l~~-------~~~~F~~~~Llr~D~~~ra~~~~~~~ 368 (368) ++||+.++. ++++|+|++.+.|++++|.|+++.||+ +|++|.+ .+++|+...|+++|.+++++...... T Consensus 310 ~~lG~~~~~-~~~s~~e~~~~~f~~~~l~P~~~~ie~~ln~~l~~~~~~~~~~~i~f~~~~l~~~d~~~~~~~~~~~~ 386 (467) T protein:vir:31 310 VIAGVVESG-AFSTDAEEQRKEFAEETIQPKQHDFGELLYELVHKQGLDAPDWTIEFELAKPDTKLQDVEIASQRVQA 386 (467) T ss_pred HHcccCCCC-CcccCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhhccCCceEEEecchhhccCHHHHHHHHHHHH Confidence 999987653 456899999999999999999999985 8888743 25899999999999999998776654 No 77 >protein:vir:960 Length: 413 # NCBI annotation: portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:19 # MgeName: bIL285 # Cross-refs: genbank:acc:NP_076614;genbank:gi:13095722;genbank:GeneID:920279 Probab=100.00 E-value=1.2e-60 Score=349.15 Aligned_cols=342 Identities=12% Similarity=0.121 Sum_probs=246.8 Q ss_pred CC---------cCCCCccccccccccccccCCCcchhhccccCceEEEECCCce-eccChHHHHHHHHHHhccchhcccc Q lcl|Aclame:pro 1 MS---------RNKTRRAARAASAHVRTANTDAPTEHHTDRAAQAEVFSFGDPV-EVLDRRELLDYVECMRMGQWYEPPM 70 (368) Q Consensus 1 m~---------~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~p~-~~~~~~~~~~~~~~~~~~~~~~~p~ 70 (368) || .-|+++............+....... ........+ ++++. ..+...+++.|+.++. .+++..|+ T Consensus 4 ~~~~~~~~~m~~F~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~-~~~~~~~~~~~~~v~~cI~~ia-~~ia~~~~ 79 (413) T protein:vir:96 4 VSEIRKDKNLKFFNNKRSPTEESKAKDEIPKAPQVVM--TLPNFFKEL-ISDGYTKLSDSPEVRMAVDCIA-DLVSNMTI 79 (413) T ss_pred cchhhhhhcCCccccCCCcchhhhhhccccccccccc--cchhhHhhh-ccchhHHHhhchHHHHHHHHHH-HhhccCce Confidence 44 22221111000000001111100000 000000101 11221 2234556667776654 55777776 Q ss_pred cHHHHHHHHHhcccccchhhhccch-HHhhccCCCCcCH-HHHHHHHHhHhhhCCeeEEEEecCCc-ceEEEEEeccccc Q lcl|Aclame:pro 71 PWDGLARSFRAAAHHSSAVYVKRNI-LVSTFIPHPLLSR-ATFERLVLDWQVFGNAYLERRENVLG-GTIRLDTPLAKYV 147 (368) Q Consensus 71 ~~~~l~~~~r~~~~~~~~~~~~~~~-~l~~~~~n~~~~~-~~~~~~~~~~ll~Gnay~~i~r~~~G-~~~~L~~l~p~~v 147 (368) .+ ++....+. ...+|+. .++...||++++. +||+.++.+++++||||++++|+..| ++++|+|++|.+| T Consensus 80 ~~------~~~~~~~~--~~~~~~~~~ll~~~PN~~~t~~~f~~~~~~~lll~Gn~~~~i~r~~~g~~~~~L~~l~~~~v 151 (413) T protein:vir:96 80 QL------MQNGETGD--KRIKNDLSRVVDIEPNKYLSRKTFIQWLVRSMLLEGNGNAVVKPQVSGDKIIGLTPISPYKV 151 (413) T ss_pred EE------EEecCCCc--cccccHHHHHHHhccccCCCHHHHHHHHHHHHhhcCCeEEEEEEcCCCCceEEEEEecCcee Confidence 53 23332222 2234553 3555789998875 78899999999999999999999877 5789999999999 Q ss_pred ccccCCCe-eEEEeCCceEEEEcCccEEEecC-CCCcCCccccchhhHHHHHHHHHHHHHHHHHHHHhccCCCceeEEeC Q lcl|Aclame:pro 148 RRGLDLNT-YFFVQNWQQPYTFAAGSVFHLQE-PDINQEVYGLPEYLSALNATWLNESATLFRRRYYKNGSHAGFILYMT 225 (368) Q Consensus 148 ~~~~~~~~-~~~~~~~~~~~~~~~~dviH~r~-~~~~~~~~G~spi~~a~~~i~~~~~a~~~~~~~f~ng~~p~gil~~~ 225 (368) ++..+.+. +|.+..++ .++.++||||||. +++.++++|+||+.++..+|.++.++++|..++|+||++|+|||+++ T Consensus 152 ~~~~~~~~~~y~~~~~~--~~~~~~evih~k~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~p~gil~~~ 229 (413) T protein:vir:96 152 TFNVSDDDLDYSITFDN--KEYDPSTLLHFVLNPSIERPFIGTGYKVALKDIVGNLKQASVTKKGFMASEYMPNLIVSVD 229 (413) T ss_pred EEEEcCCeEEEEEeecC--cEEchhhEEEEeccCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHHhccCCccEEEEeC Confidence 98877665 34444444 4678999999994 66778999999999999999999999999999999999999999987 Q ss_pred CCCccHHHHHHHHHHHHHhc-cccccccccccccCccccccccccc-cchhhHHHHHHHHHHHHHHHHHHhCCChHHhcc Q lcl|Aclame:pro 226 DAAQKQEDVDTLREAMKSAK-GPGNFRNLFMYAPNGKKDGIQLLPV-SEVAAKDEFWNIKNVTRDDQLAAHRVPPQLMGI 303 (368) Q Consensus 226 ~~~l~~e~~~~~k~~~~~~~-g~~n~~~~~~l~~~g~~~g~~~~pl-~~~~~d~qf~e~~~~~~~~Ia~~fgVPp~~lg~ 303 (368) + .+++++.+++++.|++.+ |..|+|+++++..++ .+++++ +++++|+||+|++++++++||++|||||++||. T Consensus 230 ~-~l~~e~~~~~~~~~~~~~~g~~n~g~~~vl~~~~----~~~~~~~~~~~~d~q~~e~~~~~~~~Ia~~fgVP~~~lg~ 304 (413) T protein:vir:96 230 S-DSDELSDEEGRENFEEMYLKRKEAGKPWIIPEGM----VNVQQIKPLTLNDLAINDAVTLDKKTVAGIFGVPAFLLGV 304 (413) T ss_pred C-CCCHHHHHHHHHHHHHHhcCccccCceeeecCCc----ccccccccCChhHHHHHHHHHHHHHHHHHHhCCCHHHcCC Confidence 5 689999999999998864 568999999885433 345555 357899999999999999999999999999985 Q ss_pred cccccccccCHHHHHHHHHHHHHHHHHHHHH-HHHhhcCc--ceEeechhhhhcCChhhhhhhhhhcC Q lcl|Aclame:pro 304 IPNNTGGFGDVEKAAMVFARNEVKPLQDRLL-AINDWIGD--EVVRFAPYALGGHDQPAAAPGGQRSA 368 (368) Q Consensus 304 ~~~~~~~~sn~e~~~~~f~~~tl~P~~~~ie-~l~~~l~~--~~~~F~~~~Llr~D~~~ra~~~~~~~ 368 (368) . ++.+++...|+++||.||++.|| +||++|.+ .+++||.+.|+++|.+++++..+..- T Consensus 305 ~-------~~~~~~~~~~~~~~l~P~~~~ie~~ln~~ll~~~~~~~fd~~~ll~~d~~~~~~~~~~~~ 365 (413) T protein:vir:96 305 G-------TYNKDEFNNFINTKIMSIAQVIQQTYNKLIVEEDMYFSLNPRSLYNYSLTEMVSAGAQMT 365 (413) T ss_pred C-------cchHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCcEEEEechhhhccCHHHHHHHHHHHH Confidence 2 23588889999999999999999 48987744 36899999999999999998776554 No 78 >protein:vir:99312 Length: 563 # NCBI annotation: putative portal protein # Family: family:all:2446 # MgeID: mge:1655 # MgeName: K # Cross-refs: genbank:acc:YP_024471;genbank:gi:48696430;genbank:GeneID:2948040 Probab=100.00 E-value=2e-60 Score=347.92 Aligned_cols=344 Identities=14% Similarity=0.097 Sum_probs=230.6 Q ss_pred CCcCCCCccccccccccccccCCCcchhhccccCceEEEECCCceeccCh---HHH----------HHHHHHHhccchhc Q lcl|Aclame:pro 1 MSRNKTRRAARAASAHVRTANTDAPTEHHTDRAAQAEVFSFGDPVEVLDR---REL----------LDYVECMRMGQWYE 67 (368) Q Consensus 1 m~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~p~~~~~~---~~~----------~~~~~~~~~~~~~~ 67 (368) .+|.+.++...-.++...... ..+-|. +.|..+-.. ..+ ..|+.+.. ..++. T Consensus 46 ~~~~~~~~~~a~~~~~~~~~~-------------~~~~~~-~~~~~~~~~~~l~~~l~~~~~n~i~~~~I~t~~-~~vA~ 110 (563) T protein:vir:99 46 LTKSLYGQQQAYAEPFIEMMD-------------TNPEFR-DKRSYMKNEHNLHDVLKKFGNNPILNAIILTRS-NQVAM 110 (563) T ss_pred HHhhhccCCCcchhhhHhhhc-------------cccccc-ccccCCCCcccHHHHHHHhhcchHHHHHHHHHH-HHHHH Confidence 333222211111111110000 001111 111111110 011 11222111 11111 Q ss_pred ccccHHHHHHHHH-----------hccccc-chhhhccc--hHHhhcc--CCCC--cCHHHHHHHHHhHhhhCCeeEEEE Q lcl|Aclame:pro 68 PPMPWDGLARSFR-----------AAAHHS-SAVYVKRN--ILVSTFI--PHPL--LSRATFERLVLDWQVFGNAYLERR 129 (368) Q Consensus 68 ~p~~~~~l~~~~r-----------~~~~~~-~~~~~~~~--~~l~~~~--~n~~--~~~~~~~~~~~~~ll~Gnay~~i~ 129 (368) .+ +...+.+ ...... ......+. ..+.... ++|+ +.++|++.++.+++++||+|++++ T Consensus 111 ~~----~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~p~~~t~~~f~~~lv~~lll~Gn~~~~~~ 186 (563) T protein:vir:99 111 YC----QPARYSEKGLGFEVRLRDLDAEPGRKEKEEMKRIEDFIVNTGKDKDVDRDSFQTFCKKIVRDTYIYDQVNFEKV 186 (563) T ss_pred Hh----hhhhhhcccccceeEEeecCCCcchhhhhhhHHHHHHhhhcCCCCCCCcchHHHHHHHHHHHHHhcCCeEEEEE Confidence 11 1111111 111111 11111111 1222222 3343 345899999999999999999866 Q ss_pred --ecCCcceEEEEEecccccccccCCCe--------eEEEeCCceEEEEcCccEEEec-CCCC--cCCccccchhhHHHH Q lcl|Aclame:pro 130 --ENVLGGTIRLDTPLAKYVRRGLDLNT--------YFFVQNWQQPYTFAAGSVFHLQ-EPDI--NQEVYGLPEYLSALN 196 (368) Q Consensus 130 --r~~~G~~~~L~~l~p~~v~~~~~~~~--------~~~~~~~~~~~~~~~~dviH~r-~~~~--~~~~~G~spi~~a~~ 196 (368) |++.|+|++|+|++|.+|++..+.++ |+++..++....|.++||||++ ++++ ..++||+|||.+++. T Consensus 187 ~~rd~~G~~~~L~pl~p~~V~v~~~~~g~~~~~~~~y~~~~~g~~~~~~~~~evI~~~~~~~~d~~~~~~G~Spi~~a~~ 266 (563) T protein:vir:99 187 FNKNNKTKLEKFIAVDPSTIFYATDKKGKIIKGGKRFVQVVDKRVVASFTSRELAMGIRNPRTELSSSGYGLSEVEIAMK 266 (563) T ss_pred EEecCCCceEEEEEeCCceeEEEECCCCceeccceeEEEEeCCceeEEecCcceEEEeccCCCCcccCcccchHHHHHHH Confidence 78889999999999999998766553 3455566677789999987554 4432 337899999999999 Q ss_pred HHHHHHHHHHHHHHHHhccCCCceeEEeCC-CCccHHHHHHHHHHHHHhc-cccccccc-cccccCccccccccccccch Q lcl|Aclame:pro 197 ATWLNESATLFRRRYYKNGSHAGFILYMTD-AAQKQEDVDTLREAMKSAK-GPGNFRNL-FMYAPNGKKDGIQLLPVSEV 273 (368) Q Consensus 197 ~i~~~~~a~~~~~~~f~ng~~p~gil~~~~-~~l~~e~~~~~k~~~~~~~-g~~n~~~~-~~l~~~g~~~g~~~~pl~~~ 273 (368) +|.++.++++|+.++|+||++|+|||++++ ..+++|+++++++.|++.+ |..|+|++ +++ +.|++|+|++++ T Consensus 267 ~i~~~~~~~~~~~~~f~ng~~p~giL~~~~~~~ls~e~~~~~~~~~~~~~~G~~nagk~~~vl-----~~G~~~~~l~~~ 341 (563) T protein:vir:99 267 EFIAYNNTESFNDRFFSHGGTTRGILQIRSDQQQSQHALENFKREWKSSLSGINGSWQIPVVM-----ADDIKFVNMTPT 341 (563) T ss_pred HHHHHHHHHHHHHHHHHccCCCceEEEeCCCCCCCHHHHHHHHHHHHHHhccccccccceEEc-----CCCceEEeccCC Confidence 999999999999999999999999999875 3589999999999998864 66899997 455 578999999999 Q ss_pred hhHHHHHHHHHHHHHHHHHHhCCChHHhcccccc---------cccccCHHHHHHHHHHHHHHHHHHHHH-HHHhhcCcc Q lcl|Aclame:pro 274 AAKDEFWNIKNVTRDDQLAAHRVPPQLMGIIPNN---------TGGFGDVEKAAMVFARNEVKPLQDRLL-AINDWIGDE 343 (368) Q Consensus 274 ~~d~qf~e~~~~~~~~Ia~~fgVPp~~lg~~~~~---------~~~~sn~e~~~~~f~~~tl~P~~~~ie-~l~~~l~~~ 343 (368) ++|+||+|++++++++||++|||||++||+.++. +.+++|+|++.+.|+++||.||++.|| +||++|.+. T Consensus 342 ~~d~qfle~~~~~~~~Ia~afgVPp~~lG~~~~~~~~~~~~~ss~~~sn~e~~~~~f~~~tL~P~l~~ie~~ln~~L~~~ 421 (563) T protein:vir:99 342 ANDMQFEKWLNYLINIISALYGIDPAEIGFPNRGGATGSKGGSTLNEADPGKKQQQSQNKGLQPLLRFIEDLVNRHIISE 421 (563) T ss_pred hhHHHHHHHHHHHHHHHHHHhCCCHHHccccccccccccccccchhhccHHHHHHHHHHHHHHHHHHHHHHHHHhhhchh Confidence 9999999999999999999999999999987643 236689999999999999999999999 599888766 Q ss_pred eEeechhhhhcCChhhhhhhhhhcC Q lcl|Aclame:pro 344 VVRFAPYALGGHDQPAAAPGGQRSA 368 (368) Q Consensus 344 ~~~F~~~~Llr~D~~~ra~~~~~~~ 368 (368) +.......|+|+|.++|++.++-.. T Consensus 422 ~~~~~~~~f~r~D~~~~~e~~~~~~ 446 (563) T protein:vir:99 422 YGDKYTFQFVGGDTKSATDKLNILK 446 (563) T ss_pred cccccEEEeccCCHHHHHHHHHHHH Confidence 4222223378999999988765332 No 79 >protein:vir:95599 Length: 563 # NCBI annotation: ORF014 # Family: family:all:2446 # MgeID: mge:1577 # MgeName: G1 # Cross-refs: genbank:acc:YP_240900;genbank:gi:66394963;genbank:GeneID:5132540 Probab=100.00 E-value=2e-60 Score=347.92 Aligned_cols=344 Identities=14% Similarity=0.097 Sum_probs=230.6 Q ss_pred CCcCCCCccccccccccccccCCCcchhhccccCceEEEECCCceeccCh---HHH----------HHHHHHHhccchhc Q lcl|Aclame:pro 1 MSRNKTRRAARAASAHVRTANTDAPTEHHTDRAAQAEVFSFGDPVEVLDR---REL----------LDYVECMRMGQWYE 67 (368) Q Consensus 1 m~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~p~~~~~~---~~~----------~~~~~~~~~~~~~~ 67 (368) .+|.+.++...-.++...... ..+-|. +.|..+-.. ..+ ..|+.+.. ..++. T Consensus 46 ~~~~~~~~~~a~~~~~~~~~~-------------~~~~~~-~~~~~~~~~~~l~~~l~~~~~n~i~~~~I~t~~-~~vA~ 110 (563) T protein:vir:95 46 LTKSLYGQQQAYAEPFIEMMD-------------TNPEFR-DKRSYMKNEHNLHDVLKKFGNNPILNAIILTRS-NQVAM 110 (563) T ss_pred HHhhhccCCCcchhhhHhhhc-------------cccccc-ccccCCCCcccHHHHHHHhhcchHHHHHHHHHH-HHHHH Confidence 333222211111111110000 001111 111111110 011 11222111 11111 Q ss_pred ccccHHHHHHHHH-----------hccccc-chhhhccc--hHHhhcc--CCCC--cCHHHHHHHHHhHhhhCCeeEEEE Q lcl|Aclame:pro 68 PPMPWDGLARSFR-----------AAAHHS-SAVYVKRN--ILVSTFI--PHPL--LSRATFERLVLDWQVFGNAYLERR 129 (368) Q Consensus 68 ~p~~~~~l~~~~r-----------~~~~~~-~~~~~~~~--~~l~~~~--~n~~--~~~~~~~~~~~~~ll~Gnay~~i~ 129 (368) .+ +...+.+ ...... ......+. ..+.... ++|+ +.++|++.++.+++++||+|++++ T Consensus 111 ~~----~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~p~~~t~~~f~~~lv~~lll~Gn~~~~~~ 186 (563) T protein:vir:95 111 YC----QPARYSEKGLGFEVRLRDLDAEPGRKEKEEMKRIEDFIVNTGKDKDVDRDSFQTFCKKIVRDTYIYDQVNFEKV 186 (563) T ss_pred Hh----hhhhhhcccccceeEEeecCCCcchhhhhhhHHHHHHhhhcCCCCCCCcchHHHHHHHHHHHHHhcCCeEEEEE Confidence 11 1111111 111111 11111111 1222222 3343 345899999999999999999866 Q ss_pred --ecCCcceEEEEEecccccccccCCCe--------eEEEeCCceEEEEcCccEEEec-CCCC--cCCccccchhhHHHH Q lcl|Aclame:pro 130 --ENVLGGTIRLDTPLAKYVRRGLDLNT--------YFFVQNWQQPYTFAAGSVFHLQ-EPDI--NQEVYGLPEYLSALN 196 (368) Q Consensus 130 --r~~~G~~~~L~~l~p~~v~~~~~~~~--------~~~~~~~~~~~~~~~~dviH~r-~~~~--~~~~~G~spi~~a~~ 196 (368) |++.|+|++|+|++|.+|++..+.++ |+++..++....|.++||||++ ++++ ..++||+|||.+++. T Consensus 187 ~~rd~~G~~~~L~pl~p~~V~v~~~~~g~~~~~~~~y~~~~~g~~~~~~~~~evI~~~~~~~~d~~~~~~G~Spi~~a~~ 266 (563) T protein:vir:95 187 FNKNNKTKLEKFIAVDPSTIFYATDKKGKIIKGGKRFVQVVDKRVVASFTSRELAMGIRNPRTELSSSGYGLSEVEIAMK 266 (563) T ss_pred EEecCCCceEEEEEeCCceeEEEECCCCceeccceeEEEEeCCceeEEecCcceEEEeccCCCCcccCcccchHHHHHHH Confidence 78889999999999999998766553 3455566677789999987554 4432 337899999999999 Q ss_pred HHHHHHHHHHHHHHHHhccCCCceeEEeCC-CCccHHHHHHHHHHHHHhc-cccccccc-cccccCccccccccccccch Q lcl|Aclame:pro 197 ATWLNESATLFRRRYYKNGSHAGFILYMTD-AAQKQEDVDTLREAMKSAK-GPGNFRNL-FMYAPNGKKDGIQLLPVSEV 273 (368) Q Consensus 197 ~i~~~~~a~~~~~~~f~ng~~p~gil~~~~-~~l~~e~~~~~k~~~~~~~-g~~n~~~~-~~l~~~g~~~g~~~~pl~~~ 273 (368) +|.++.++++|+.++|+||++|+|||++++ ..+++|+++++++.|++.+ |..|+|++ +++ +.|++|+|++++ T Consensus 267 ~i~~~~~~~~~~~~~f~ng~~p~giL~~~~~~~ls~e~~~~~~~~~~~~~~G~~nagk~~~vl-----~~G~~~~~l~~~ 341 (563) T protein:vir:95 267 EFIAYNNTESFNDRFFSHGGTTRGILQIRSDQQQSQHALENFKREWKSSLSGINGSWQIPVVM-----ADDIKFVNMTPT 341 (563) T ss_pred HHHHHHHHHHHHHHHHHccCCCceEEEeCCCCCCCHHHHHHHHHHHHHHhccccccccceEEc-----CCCceEEeccCC Confidence 999999999999999999999999999875 3589999999999998864 66899997 455 578999999999 Q ss_pred hhHHHHHHHHHHHHHHHHHHhCCChHHhcccccc---------cccccCHHHHHHHHHHHHHHHHHHHHH-HHHhhcCcc Q lcl|Aclame:pro 274 AAKDEFWNIKNVTRDDQLAAHRVPPQLMGIIPNN---------TGGFGDVEKAAMVFARNEVKPLQDRLL-AINDWIGDE 343 (368) Q Consensus 274 ~~d~qf~e~~~~~~~~Ia~~fgVPp~~lg~~~~~---------~~~~sn~e~~~~~f~~~tl~P~~~~ie-~l~~~l~~~ 343 (368) ++|+||+|++++++++||++|||||++||+.++. +.+++|+|++.+.|+++||.||++.|| +||++|.+. T Consensus 342 ~~d~qfle~~~~~~~~Ia~afgVPp~~lG~~~~~~~~~~~~~ss~~~sn~e~~~~~f~~~tL~P~l~~ie~~ln~~L~~~ 421 (563) T protein:vir:95 342 ANDMQFEKWLNYLINIISALYGIDPAEIGFPNRGGATGSKGGSTLNEADPGKKQQQSQNKGLQPLLRFIEDLVNRHIISE 421 (563) T ss_pred hhHHHHHHHHHHHHHHHHHHhCCCHHHccccccccccccccccchhhccHHHHHHHHHHHHHHHHHHHHHHHHHhhhchh Confidence 9999999999999999999999999999987643 236689999999999999999999999 599888766 Q ss_pred eEeechhhhhcCChhhhhhhhhhcC Q lcl|Aclame:pro 344 VVRFAPYALGGHDQPAAAPGGQRSA 368 (368) Q Consensus 344 ~~~F~~~~Llr~D~~~ra~~~~~~~ 368 (368) +.......|+|+|.++|++.++-.. T Consensus 422 ~~~~~~~~f~r~D~~~~~e~~~~~~ 446 (563) T protein:vir:95 422 YGDKYTFQFVGGDTKSATDKLNILK 446 (563) T ss_pred cccccEEEeccCCHHHHHHHHHHHH Confidence 4222223378999999988765332 No 80 >protein:vir:99452 Length: 651 # NCBI annotation: hypothetical protein # Family: family:all:1379 # ACLAME annotation(s): phi:0000161 - phage head/capsid # MgeID: mge:1595 # MgeName: BJ1 # Cross-refs: genbank:acc:YP_919077;genbank:gi:119757035;genbank:GeneID:4606105 Probab=100.00 E-value=6e-61 Score=350.74 Aligned_cols=343 Identities=14% Similarity=0.176 Sum_probs=247.1 Q ss_pred CCcCCCCccccccccccccccCCCcchhhccccCceEEEECCCceeccChHHHHHHHHHHhccchhcccccHHHHHHHHH Q lcl|Aclame:pro 1 MSRNKTRRAARAASAHVRTANTDAPTEHHTDRAAQAEVFSFGDPVEVLDRRELLDYVECMRMGQWYEPPMPWDGLARSFR 80 (368) Q Consensus 1 m~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~r 80 (368) |+-.|.+.|++.-+... .+..++......+-+. + .....+...+..+|++...|..+.+ T Consensus 1 ~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~-------~---------~~~~~~~~~~~~p~~~~~~L~~~~e 59 (651) T protein:vir:99 1 MTDTTGETQETKVHVEG-----LGGEADLAKSPNSTQI-------P---------DHRIQSHNVGVNPPYNPDRLAAFLE 59 (651) T ss_pred CCCccceeeeeEEEeec-----cccccccccccccccc-------c---------hhhhcccCCCCCCCCCHHHHHHHHh Confidence 99888666664333211 1111111111110000 0 0001111223444444444444444 Q ss_pred hcccccchhhhccchH--------------------------------------HhhccCCCCcC-HHHHHHHHHhHhhh Q lcl|Aclame:pro 81 AAAHHSSAVYVKRNIL--------------------------------------VSTFIPHPLLS-RATFERLVLDWQVF 121 (368) Q Consensus 81 ~~~~~~~~~~~~~~~~--------------------------------------l~~~~~n~~~~-~~~~~~~~~~~ll~ 121 (368) .+..|.+|+....+.. ......|+.++ .++++.++.|++.+ T Consensus 60 ~~~~~~~~i~~~~~~iag~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~n~~~t~~~i~~~~~~Dle~t 139 (651) T protein:vir:99 60 LNETLATGIRKKSRYEVGFGFDLVPAQGVDGDDASDAQREVARNFWRGRSSRWQTGPNQAKTPATPERVKELARQDYHGV 139 (651) T ss_pred cChHHHHHHHHHhhhhhccCceeeecccCCCCccchHHHHHHHHHhhccchhhcccccccCCCCCHHHHHHHHHHHHHHH Confidence 4444444433222111 00111344344 46777888999999 Q ss_pred CCeeEEEEecCCcceEEEEEecccccccccCCC----------------------------------ee----------- Q lcl|Aclame:pro 122 GNAYLERRENVLGGTIRLDTPLAKYVRRGLDLN----------------------------------TY----------- 156 (368) Q Consensus 122 Gnay~~i~r~~~G~~~~L~~l~p~~v~~~~~~~----------------------------------~~----------- 156 (368) ||+|++++|+..|+|++|+++++..+++..+.+ .| T Consensus 140 Gna~ieiIrn~~g~pv~L~~lp~~~~Rv~~~~~~~~~~~~~ll~~~pn~~~~~~~~~~~~q~~~~~~~~~~~~g~~~~~~ 219 (651) T protein:vir:99 140 GWLALEMLTDIEGRPVGLAYVPARTVRVRRPQNRFDQPRHPEEGRYVDGDVADIASRGYVQIRNGNRRYFGEAGDRYRGQ 219 (651) T ss_pred hhHhhhhhhcCccchhhhhhcChhheeeecccccccchhhhhhhcccccccchhHHHHHHHHHhcCcceEEEeeccccce Confidence 999999999999999999999987665432110 00 Q ss_pred ----------------------------------EEEeCCceEEEEcCccEEEecCCCCcCCccccchhhHHHHHHHHHH Q lcl|Aclame:pro 157 ----------------------------------FFVQNWQQPYTFAAGSVFHLQEPDINQEVYGLPEYLSALNATWLNE 202 (368) Q Consensus 157 ----------------------------------~~~~~~~~~~~~~~~dviH~r~~~~~~~~~G~spi~~a~~~i~~~~ 202 (368) |.....+...+++++||||||.+++.+++||+|||..++.+|.++. T Consensus 220 ~~~~~~~~~~v~~~~~~d~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~eViHir~~~~~~g~~G~spl~~a~~~i~~a~ 299 (651) T protein:vir:99 220 EVVIDESGDEPTIRYREDEESEREPIFVDRETGDVTTGDANGLENRPANELIFIPNPSILEDDYGVPDWVSAIRTISADE 299 (651) T ss_pred eeeeccCCcceeEEeccCcceeeeeecccceeeeEEEcCCCceeEecccceEEecCCCCCCCcccccHHHHHHHHHHHHH Confidence 0111122345678899999999988899999999999999999999 Q ss_pred HHHHHHHHHHhccCCCceeEEeCCCCccHHHHHHHHHHHHHhccccccccccccccCc------cccccccccccchh-h Q lcl|Aclame:pro 203 SATLFRRRYYKNGSHAGFILYMTDAAQKQEDVDTLREAMKSAKGPGNFRNLFMYAPNG------KKDGIQLLPVSEVA-A 275 (368) Q Consensus 203 ~a~~~~~~~f~ng~~p~gil~~~~~~l~~e~~~~~k~~~~~~~g~~n~~~~~~l~~~g------~~~g~~~~pl~~~~-~ 275 (368) ++++|+.++|+||++|+|||++++..+++++++++++.|++.. +|+|++++|..++ .+.|++|+||++++ + T Consensus 300 ~a~~~~~~~f~NG~~p~gil~~~~~~ls~e~~~~lr~~~~~~~--~nagk~~vL~~~~~~~~~~~~~g~~~~pls~~~~~ 377 (651) T protein:vir:99 300 AAKDYNRDFFDNDTIPRMVIKVTGGELSEESKRDLRQMLNGLR--EESHRAVVLEVEKFQSQLDEDVEIELEPMGQGISE 377 (651) T ss_pred HHHHHHHHHHhccCCCceEEEecCCCCCHHHHHHHHHHHHHHh--ccCCceEEeecccccccccccCCceEEEcCcCchh Confidence 9999999999999999999999887899999999999999855 4789999886532 23589999999987 5 Q ss_pred HHHHHHHHHHHHHHHHHHhCCChHHhcccccccccccCHHHHHHHHHHHHHHHHHHHHH-HHHhhcCcc---------eE Q lcl|Aclame:pro 276 KDEFWNIKNVTRDDQLAAHRVPPQLMGIIPNNTGGFGDVEKAAMVFARNEVKPLQDRLL-AINDWIGDE---------VV 345 (368) Q Consensus 276 d~qf~e~~~~~~~~Ia~~fgVPp~~lg~~~~~~~~~sn~e~~~~~f~~~tl~P~~~~ie-~l~~~l~~~---------~~ 345 (368) |+||+|++++++++||++|||||++||+.++ +||+|+|++.+.|+++||.||+++|| +||++|.+. ++ T Consensus 378 D~qfle~r~~~~~eIa~afgVPp~~lG~~~~--~~~sn~E~~~~~f~~~tL~P~~~~ie~eln~kLl~~~e~~~~~~i~~ 455 (651) T protein:vir:99 378 EMDFRQFREKNEHEIAKVLEVPPVKIGVTDS--ANRSNSDQQDKDFALEVIQPEQHTFAEWLYQIIHQQALGVTDWTIEY 455 (651) T ss_pred hHHHHHHHHHHHHHHHHHhCCCHHHhccCCC--CCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCccccccCceEEE Confidence 9999999999999999999999999998764 68999999999999999999999999 499887542 47 Q ss_pred eechhhhhcCChhhhhhhhhhcC Q lcl|Aclame:pro 346 RFAPYALGGHDQPAAAPGGQRSA 368 (368) Q Consensus 346 ~F~~~~Llr~D~~~ra~~~~~~~ 368 (368) +|+...|+|+|.+++++.....- T Consensus 456 ef~~~~llr~D~~~~~e~~~~~i 478 (651) T protein:vir:99 456 ELRGADQPKQEAQLAEQRVRAMR 478 (651) T ss_pred EeccchhhhccHHHHHHHHHHHH Confidence 89999999999999999766533 No 81 >protein:vir:104259 Length: 403 # NCBI annotation: portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:1504 # MgeName: T5 # Cross-refs: genbank:acc:YP_006980;genbank:gi:46401881;genbank:GeneID:2777676 Probab=100.00 E-value=1.4e-60 Score=348.77 Aligned_cols=330 Identities=12% Similarity=0.119 Sum_probs=244.8 Q ss_pred CCcCCCCccccccccccccccCCCcchhhccccC--ceEEEECCCceeccChHHHHHHHHHHhccchhcccccHHHHHHH Q lcl|Aclame:pro 1 MSRNKTRRAARAASAHVRTANTDAPTEHHTDRAA--QAEVFSFGDPVEVLDRRELLDYVECMRMGQWYEPPMPWDGLARS 78 (368) Q Consensus 1 m~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~ 78 (368) +||-+.+.- |+.....+..+.++ ....+++ +..++...++..|+.++. .+++..|+.+.. T Consensus 4 ~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~t--~~~~~~~~~v~~cv~~Ia-~~ia~~p~~v~~---- 65 (403) T protein:vir:10 4 KSWITEKLN-----------PGQRIIRDMEPVSHRTNRKPFTT--GQAYSKIEILNRTANMVI-DSAAECSYTVGD---- 65 (403) T ss_pred hhhhhhccc-----------hhhhhhhcccccccccCCccccc--HHHHHHHHHHHHHHHHHH-HHHhhCceeEee---- Confidence 443332110 00000000000000 0111222 233445566777777665 568888865321 Q ss_pred HHhcc-cccchhhhccc-hHHhhccCCCCcCH-HHHHHHHHhHhhhCCeeEEEEecCCcceEEEEEecccccccccCCCe Q lcl|Aclame:pro 79 FRAAA-HHSSAVYVKRN-ILVSTFIPHPLLSR-ATFERLVLDWQVFGNAYLERRENVLGGTIRLDTPLAKYVRRGLDLNT 155 (368) Q Consensus 79 ~r~~~-~~~~~~~~~~~-~~l~~~~~n~~~~~-~~~~~~~~~~ll~Gnay~~i~r~~~G~~~~L~~l~p~~v~~~~~~~~ 155 (368) +... ..+..+ .+|+ ..++..+|||+++. +|++.++.+++++||||+++.+ .+|+++++..+++..+.+. T Consensus 66 -~~~~~~~~~~~-~~~~l~~lL~~~PN~~~t~~~f~~~~~~~~ll~Gnayi~~~~------~~l~~l~~~~~~v~~~~~~ 137 (403) T protein:vir:10 66 -KYNIVTYANGV-KTKTLDTLLNVRPNPFMDISTFRRLVVTDLLFEGCAYIYWDG------TSLYHVPAALMQVEADANK 137 (403) T ss_pred -ccccccccccc-ccchHHHHHhhCCCCCCCHHHHHHHHHHHHhhcCCeEEEEeC------ceeEeecCcceEEEEcCCc Confidence 1111 112222 2343 45677789998875 7888999999999999988743 2589999999988776655 Q ss_pred eEEEeCCceEEEEcCccEEEecCCC----CcCCccccchhhHHHHHHHHHHHHHHHHHHHHhccCCCceeEEeCCCCccH Q lcl|Aclame:pro 156 YFFVQNWQQPYTFAAGSVFHLQEPD----INQEVYGLPEYLSALNATWLNESATLFRRRYYKNGSHAGFILYMTDAAQKQ 231 (368) Q Consensus 156 ~~~~~~~~~~~~~~~~dviH~r~~~----~~~~~~G~spi~~a~~~i~~~~~a~~~~~~~f~ng~~p~gil~~~~~~l~~ 231 (368) .+.....+....+.++|||||+.++ +.++++|+||+.+++++++++.++++|..++|+||++|+|||++++ .+++ T Consensus 138 ~~~~~~~~~~~~~~~~eiih~~~~~~~~~~~~~~~G~s~i~~~~~~i~~~~~~~~~~~~~f~ng~~~~gil~~~~-~l~~ 216 (403) T protein:vir:10 138 FIKKFIFNNQINYRVDEIIFIKDNSYVCGTNSQISGQSRVATVIDSLEKRSKMLNFKEKFLDNGTVIGLILETDE-ILNK 216 (403) T ss_pred eEEEEEecCceeecccceEEecccccccCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEeCC-CCCH Confidence 3333333344678899999999654 3478999999999999999999999999999999999999999865 6999 Q ss_pred HHHHHHHHHHHHhc-cccccccccccccCccccccccccccc--hhhHHHHHHHHHHHHHHHHHHhCCChHHhccccccc Q lcl|Aclame:pro 232 EDVDTLREAMKSAK-GPGNFRNLFMYAPNGKKDGIQLLPVSE--VAAKDEFWNIKNVTRDDQLAAHRVPPQLMGIIPNNT 308 (368) Q Consensus 232 e~~~~~k~~~~~~~-g~~n~~~~~~l~~~g~~~g~~~~pl~~--~~~d~qf~e~~~~~~~~Ia~~fgVPp~~lg~~~~~~ 308 (368) ++++++++.|++.+ |.+|+|++++| +.|++|+|+++ +++|+||+|++++++++||++|||||++||. T Consensus 217 e~~~~~~~~~~~~~~g~~n~g~~~vl-----~~g~~~~~~~~~~~~~d~q~~e~~~~~~~~Ia~~fgVPp~~lg~----- 286 (403) T protein:vir:10 217 KLRERKQEELQLDYNPSTGQSSVLIL-----DGGMKAKPYSQISSFKDLDFKEDIEGFNKSICLAFGVPQVLLDG----- 286 (403) T ss_pred HHHHHHHHHHHHHhCCcccCcceeec-----CCCceeEEecccCCHHHHHHHHHHHHHHHHHHHHhCCCHHHcCC----- Confidence 99999999998765 66899999998 57899999986 5789999999999999999999999999974 Q ss_pred ccccCHHHHHHHHHHHHHHHHHHHHHH-HHhhcCcceEeechhhh--hcCChhhhhhhhhhcC Q lcl|Aclame:pro 309 GGFGDVEKAAMVFARNEVKPLQDRLLA-INDWIGDEVVRFAPYAL--GGHDQPAAAPGGQRSA 368 (368) Q Consensus 309 ~~~sn~e~~~~~f~~~tl~P~~~~ie~-l~~~l~~~~~~F~~~~L--lr~D~~~ra~~~~~~~ 368 (368) ++++|+|++.+.|+++||.||++.||+ +|++|+. +++||.+.+ +++|.+++++..++.- T Consensus 287 ~~~sn~e~~~~~f~~~tl~P~~~~ie~~l~~~L~~-~~~~d~~~~~~l~~D~~~~~~~~~~~~ 348 (403) T protein:vir:10 287 GNNANIRPNIELFYYMTIIPMLNKLTSSLTFFFGY-KITPNTKEVAALTPDKEAEAKHLTSLV 348 (403) T ss_pred CCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCc-eeeeccchhhhcccCHHHHHHHHHHHH Confidence 478899999999999999999999995 9999865 567877755 9999999988776543 No 82 >protein:vir:1023 Length: 392 # NCBI annotation: portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:20 # MgeName: bIL286 # Cross-refs: genbank:acc:NP_076677;genbank:gi:13095786;genbank:GeneID:920364 Probab=100.00 E-value=9.4e-60 Score=344.20 Aligned_cols=333 Identities=7% Similarity=0.008 Sum_probs=239.6 Q ss_pred CCcCCCCccccccccccccccCCCc--chhhcccc--CceEEEECCCceeccChHHHHHHHHHHhccchhcccccHHHHH Q lcl|Aclame:pro 1 MSRNKTRRAARAASAHVRTANTDAP--TEHHTDRA--AQAEVFSFGDPVEVLDRRELLDYVECMRMGQWYEPPMPWDGLA 76 (368) Q Consensus 1 m~~~k~~~~~~~~~~~~~~~~~~~~--~~~~~~~~--~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~ 76 (368) |+--+..++.+.+............ ..+..... .+...+ .+...+...+++.|+.++. +.++..|+.+. T Consensus 3 m~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v---~~~~al~~~~v~~~i~~ia-~~ia~lp~~~~--- 75 (392) T protein:vir:10 3 LPILNFINQTNDPPEVGSVQSYFPDGNDAQIMESLLGDNNEWV---SARAALRNSDLFSIILQLS-SDLAIVKINAE--- 75 (392) T ss_pred chhhhhhhcccccccccccccccccCchhhhhhhhcCCCCcee---chHHhhccHHHHHHHHHHH-HhhccCceeec--- Confidence 5533221111111111100000000 00000000 001111 1333455566777776654 55777776432 Q ss_pred HHHHhcccccchhhhccchHHhhccCCCCcCH-HHHHHHHHhHhhhCCeeEEEEecCCcceEEEEEecccccccccCCCe Q lcl|Aclame:pro 77 RSFRAAAHHSSAVYVKRNILVSTFIPHPLLSR-ATFERLVLDWQVFGNAYLERRENVLGGTIRLDTPLAKYVRRGLDLNT 155 (368) Q Consensus 77 ~~~r~~~~~~~~~~~~~~~~l~~~~~n~~~~~-~~~~~~~~~~ll~Gnay~~i~r~~~G~~~~L~~l~p~~v~~~~~~~~ 155 (368) ++....+...||++++. +|++.++.+++++||||++|+|+..|++++|+|++|.+|++..+.++ T Consensus 76 ---------------~~~~~~l~~~PN~~~t~~~f~~~~~~~lll~Gna~~~i~r~~~g~~~~L~~l~~~~v~~~~~~~~ 140 (392) T protein:vir:10 76 ---------------KKKNQGIIDNPSTNANKHGFWQSMFAQLLLGGEAFAYRWRNANGADMKWEYLRPSQVNTYYFEYE 140 (392) T ss_pred ---------------cchhhhHhhcCCCCCCHHHHHHHHHHHhhhcCcEEEEEEECCCCcEEEEEEEcCceeEEEEcCCC Confidence 11222345689997775 78889999999999999999999999999999999999988775432 Q ss_pred ---eEEEeC----CceEEEEcCccEEEecCCCCcCCccccchhhHHHHHHHHHHHHHHHHHHHHhccCCCceeEEeCCCC Q lcl|Aclame:pro 156 ---YFFVQN----WQQPYTFAAGSVFHLQEPDINQEVYGLPEYLSALNATWLNESATLFRRRYYKNGSHAGFILYMTDAA 228 (368) Q Consensus 156 ---~~~~~~----~~~~~~~~~~dviH~r~~~~~~~~~G~spi~~a~~~i~~~~~a~~~~~~~f~ng~~p~gil~~~~~~ 228 (368) +|.+.. ++....++++||||++.+++.+.++|+||+.+++.+|+++.++++|..++|+||++|+|+|++++.. T Consensus 141 ~~~~y~~~~~~~~~~~~~~~~~~eiih~~~~~~~~~~~G~s~i~~~~~~i~~~~~~~~~~~~~f~ng~~p~gil~~~~~~ 220 (392) T protein:vir:10 141 NGMYYNITFDDPKIEPILQAPQSDLIHMKLLSIDGGKTGISPLYSLRRESKIQRASDRLTISSLNSSLNVPGVLTVKGGG 220 (392) T ss_pred ceEEEEEEecCcccceeEEEccccEEEecCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEeCCCC Confidence 444432 2245789999999999998776789999999999999999999999999999999999999997643 Q ss_pred -ccHHHHHHHHHHHHHhccccccccccccccCccccccccccccchhhHHHHHHHHHHHHHHHHHHhCCChHHhcccccc Q lcl|Aclame:pro 229 -QKQEDVDTLREAMKSAKGPGNFRNLFMYAPNGKKDGIQLLPVSEVAAKDEFWNIKNVTRDDQLAAHRVPPQLMGIIPNN 307 (368) Q Consensus 229 -l~~e~~~~~k~~~~~~~g~~n~~~~~~l~~~g~~~g~~~~pl~~~~~d~qf~e~~~~~~~~Ia~~fgVPp~~lg~~~~~ 307 (368) .+++++++++ +++.|..|+|+++++ +.|++|++++++++|+||+|++++++++||++|||||++||.... T Consensus 221 ~~~~~~~~~~~---~~~~~~~~~g~~~vl-----~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgVpp~~lg~~~~- 291 (392) T protein:vir:10 221 LLSDKDKASRS---RSFMKRSRSGGPVVL-----DDLEEFTALEIKSNVAQLLSQTDWTSKQYAKVYGLPDSYIGGQGD- 291 (392) T ss_pred CchHHHHHHHH---HHHhccccCCCeeec-----CCCceEEEccCChhHHHHHHHHHHHHHHHHHHhCCCHHHhCCCCC- Confidence 3343433333 334567899999988 578999999999999999999999999999999999999996532 Q ss_pred cccccCHHHHHHHHHHHHHHHHHHHHH-HHHhhcCcceEeechhhhhcCChhhhhhhhhhcC Q lcl|Aclame:pro 308 TGGFGDVEKAAMVFARNEVKPLQDRLL-AINDWIGDEVVRFAPYALGGHDQPAAAPGGQRSA 368 (368) Q Consensus 308 ~~~~sn~e~~~~~f~~~tl~P~~~~ie-~l~~~l~~~~~~F~~~~Llr~D~~~ra~~~~~~~ 368 (368) .++.+++.+.|+++||.|+++.|| ++|++|.++ ++||...+++.|.+++++..+... T Consensus 292 ---~~~~~~~~~~f~~~~l~P~~~~ie~~l~~~L~~~-~~~d~~~~~~~d~~~~~~~~~~l~ 349 (392) T protein:vir:10 292 ---QQSSIQQISGMYASALNRYLRPAISELEYKLSDH-ISVNMRPAIDPLGDNYLSTISTAT 349 (392) T ss_pred ---cccHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc-ccccchhhhccCHHHHHHHHHHHH Confidence 234567788999999999999998 599988764 689999999999888876554432 No 83 >protein:vir:3989 Length: 392 # NCBI annotation: putative portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:319 # MgeName: BK5-T # Cross-refs: genbank:acc:NP_116497;genbank:gi:14251130;genbank:GeneID:921299 Probab=100.00 E-value=9.4e-60 Score=344.20 Aligned_cols=333 Identities=7% Similarity=0.008 Sum_probs=239.6 Q ss_pred CCcCCCCccccccccccccccCCCc--chhhcccc--CceEEEECCCceeccChHHHHHHHHHHhccchhcccccHHHHH Q lcl|Aclame:pro 1 MSRNKTRRAARAASAHVRTANTDAP--TEHHTDRA--AQAEVFSFGDPVEVLDRRELLDYVECMRMGQWYEPPMPWDGLA 76 (368) Q Consensus 1 m~~~k~~~~~~~~~~~~~~~~~~~~--~~~~~~~~--~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~ 76 (368) |+--+..++.+.+............ ..+..... .+...+ .+...+...+++.|+.++. +.++..|+.+. T Consensus 3 m~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v---~~~~al~~~~v~~~i~~ia-~~ia~lp~~~~--- 75 (392) T protein:vir:39 3 LPILNFINQTNDPPEVGSVQSYFPDGNDAQIMESLLGDNNEWV---SARAALRNSDLFSIILQLS-SDLAIVKINAE--- 75 (392) T ss_pred chhhhhhhcccccccccccccccccCchhhhhhhhcCCCCcee---chHHhhccHHHHHHHHHHH-HhhccCceeec--- Confidence 5533221111111111100000000 00000000 001111 1333455566777776654 55777776432 Q ss_pred HHHHhcccccchhhhccchHHhhccCCCCcCH-HHHHHHHHhHhhhCCeeEEEEecCCcceEEEEEecccccccccCCCe Q lcl|Aclame:pro 77 RSFRAAAHHSSAVYVKRNILVSTFIPHPLLSR-ATFERLVLDWQVFGNAYLERRENVLGGTIRLDTPLAKYVRRGLDLNT 155 (368) Q Consensus 77 ~~~r~~~~~~~~~~~~~~~~l~~~~~n~~~~~-~~~~~~~~~~ll~Gnay~~i~r~~~G~~~~L~~l~p~~v~~~~~~~~ 155 (368) ++....+...||++++. +|++.++.+++++||||++|+|+..|++++|+|++|.+|++..+.++ T Consensus 76 ---------------~~~~~~l~~~PN~~~t~~~f~~~~~~~lll~Gna~~~i~r~~~g~~~~L~~l~~~~v~~~~~~~~ 140 (392) T protein:vir:39 76 ---------------KKKNQGIIDNPSTNANKHGFWQSMFAQLLLGGEAFAYRWRNANGADMKWEYLRPSQVNTYYFEYE 140 (392) T ss_pred ---------------cchhhhHhhcCCCCCCHHHHHHHHHHHhhhcCcEEEEEEECCCCcEEEEEEEcCceeEEEEcCCC Confidence 11222345689997775 78889999999999999999999999999999999999988775432 Q ss_pred ---eEEEeC----CceEEEEcCccEEEecCCCCcCCccccchhhHHHHHHHHHHHHHHHHHHHHhccCCCceeEEeCCCC Q lcl|Aclame:pro 156 ---YFFVQN----WQQPYTFAAGSVFHLQEPDINQEVYGLPEYLSALNATWLNESATLFRRRYYKNGSHAGFILYMTDAA 228 (368) Q Consensus 156 ---~~~~~~----~~~~~~~~~~dviH~r~~~~~~~~~G~spi~~a~~~i~~~~~a~~~~~~~f~ng~~p~gil~~~~~~ 228 (368) +|.+.. ++....++++||||++.+++.+.++|+||+.+++.+|+++.++++|..++|+||++|+|+|++++.. T Consensus 141 ~~~~y~~~~~~~~~~~~~~~~~~eiih~~~~~~~~~~~G~s~i~~~~~~i~~~~~~~~~~~~~f~ng~~p~gil~~~~~~ 220 (392) T protein:vir:39 141 NGMYYNITFDDPKIEPILQAPQSDLIHMKLLSIDGGKTGISPLYSLRRESKIQRASDRLTISSLNSSLNVPGVLTVKGGG 220 (392) T ss_pred ceEEEEEEecCcccceeEEEccccEEEecCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEeCCCC Confidence 444432 2245789999999999998776789999999999999999999999999999999999999997643 Q ss_pred -ccHHHHHHHHHHHHHhccccccccccccccCccccccccccccchhhHHHHHHHHHHHHHHHHHHhCCChHHhcccccc Q lcl|Aclame:pro 229 -QKQEDVDTLREAMKSAKGPGNFRNLFMYAPNGKKDGIQLLPVSEVAAKDEFWNIKNVTRDDQLAAHRVPPQLMGIIPNN 307 (368) Q Consensus 229 -l~~e~~~~~k~~~~~~~g~~n~~~~~~l~~~g~~~g~~~~pl~~~~~d~qf~e~~~~~~~~Ia~~fgVPp~~lg~~~~~ 307 (368) .+++++++++ +++.|..|+|+++++ +.|++|++++++++|+||+|++++++++||++|||||++||.... T Consensus 221 ~~~~~~~~~~~---~~~~~~~~~g~~~vl-----~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgVpp~~lg~~~~- 291 (392) T protein:vir:39 221 LLSDKDKASRS---RSFMKRSRSGGPVVL-----DDLEEFTALEIKSNVAQLLSQTDWTSKQYAKVYGLPDSYIGGQGD- 291 (392) T ss_pred CchHHHHHHHH---HHHhccccCCCeeec-----CCCceEEEccCChhHHHHHHHHHHHHHHHHHHhCCCHHHhCCCCC- Confidence 3343433333 334567899999988 578999999999999999999999999999999999999996532 Q ss_pred cccccCHHHHHHHHHHHHHHHHHHHHH-HHHhhcCcceEeechhhhhcCChhhhhhhhhhcC Q lcl|Aclame:pro 308 TGGFGDVEKAAMVFARNEVKPLQDRLL-AINDWIGDEVVRFAPYALGGHDQPAAAPGGQRSA 368 (368) Q Consensus 308 ~~~~sn~e~~~~~f~~~tl~P~~~~ie-~l~~~l~~~~~~F~~~~Llr~D~~~ra~~~~~~~ 368 (368) .++.+++.+.|+++||.|+++.|| ++|++|.++ ++||...+++.|.+++++..+... T Consensus 292 ---~~~~~~~~~~f~~~~l~P~~~~ie~~l~~~L~~~-~~~d~~~~~~~d~~~~~~~~~~l~ 349 (392) T protein:vir:39 292 ---QQSSIQQISGMYASALNRYLRPAISELEYKLSDH-ISVNMRPAIDPLGDNYLSTISTAT 349 (392) T ss_pred ---cccHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc-ccccchhhhccCHHHHHHHHHHHH Confidence 234567788999999999999998 599988764 689999999999888876554432 No 84 >protein:vir:4828 Length: 382 # NCBI annotation: ORF24 # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:105 # MgeName: 7201 # Cross-refs: genbank:acc:NP_038325;genbank:gi:9634651;genbank:GeneID:1262630 Probab=100.00 E-value=5e-60 Score=345.70 Aligned_cols=328 Identities=10% Similarity=0.025 Sum_probs=250.3 Q ss_pred CCcCCCCccccccccccccccCCCcchhhccccCceEEEECCCc---eeccChHHHHHHHHHHhccchhcccccHHHHHH Q lcl|Aclame:pro 1 MSRNKTRRAARAASAHVRTANTDAPTEHHTDRAAQAEVFSFGDP---VEVLDRRELLDYVECMRMGQWYEPPMPWDGLAR 77 (368) Q Consensus 1 m~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~p---~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~ 77 (368) |+.-+...+++... ...... ... ......+..|.. ...+...+++.|+.++. ..++..|+... T Consensus 1 Mg~f~~~~~~~~~~--~~~~~~------~~~-~~~~~~~~~~~~v~~~~~l~~~~v~~~i~~ia-~~ia~~~~~~~---- 66 (382) T protein:vir:48 1 MPIFNLATESPPDN--QGGFFD------VVD-SDFLASLKGNEWVSAETALRNSDLFSIINQLS-NDLATVKLITS---- 66 (382) T ss_pred CccccccccCCccc--cccccc------chh-hhccccccCCcccchHhhhccHHHHHHHHHHH-HhhccCceeee---- Confidence 88765544332111 000000 000 000111122222 23445566667766654 55777776432 Q ss_pred HHHhcccccchhhhccchHHhhccCCCCcCH-HHHHHHHHhHhhhCCeeEEEEecCCcceEEEEEecccccccccCCCe- Q lcl|Aclame:pro 78 SFRAAAHHSSAVYVKRNILVSTFIPHPLLSR-ATFERLVLDWQVFGNAYLERRENVLGGTIRLDTPLAKYVRRGLDLNT- 155 (368) Q Consensus 78 ~~r~~~~~~~~~~~~~~~~l~~~~~n~~~~~-~~~~~~~~~~ll~Gnay~~i~r~~~G~~~~L~~l~p~~v~~~~~~~~- 155 (368) + +....+...|||+++. +|++.++.+++++||||++|+|+..|++++|+|++|++|++..+.++ T Consensus 67 --~------------~~~~~L~~~PN~~~t~~~f~~~l~~~l~l~Gna~~~i~rd~~G~~~~l~~i~~~~v~v~~~~~~~ 132 (382) T protein:vir:48 67 --R------------KKLQGIVDNPSNNANRFNFYQSIFAQMLLGGEAFAYRWRNENGRDMKWEYLRPSQVSFNRLDNKD 132 (382) T ss_pred --c------------chhhhhhhhcCCCCCHHHHHHHHHHHhhhcCCEEEEEEECCCCcEEEEEEEcCceeEEEEcCCCC Confidence 1 1122455689998765 78889999999999999999999999999999999999998765432 Q ss_pred --eEEEeCC----ceEEEEcCccEEEecCCCCcCCccccchhhHHHHHHHHHHHHHHHHHHHHhccCCCceeEEeCCCCc Q lcl|Aclame:pro 156 --YFFVQNW----QQPYTFAAGSVFHLQEPDINQEVYGLPEYLSALNATWLNESATLFRRRYYKNGSHAGFILYMTDAAQ 229 (368) Q Consensus 156 --~~~~~~~----~~~~~~~~~dviH~r~~~~~~~~~G~spi~~a~~~i~~~~~a~~~~~~~f~ng~~p~gil~~~~~~l 229 (368) +|.+..+ +..+.|+++|||||+.+++.+.++|+||+.+++.+|.++.++++|..++|+||++|+|||++++ .+ T Consensus 133 ~~~y~~~~~~~~~~~~~~~~~~evih~~~~~~~~~~~G~s~l~~~~~~i~~~~~~~~~~~~~~~ng~~p~~il~~~~-~~ 211 (382) T protein:vir:48 133 GIYYNITFDDPRIPPKQHVPQNDVLHFRLLSVDGGMTSVSPLMALSRELDIQKASGNLTINSLKNALNANGILKIKG-GG 211 (382) T ss_pred eEEEEEEecCccccceeEEcCccEEEecCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEeCC-CC Confidence 4444332 4567899999999999988777999999999999999999999999999999999999999976 57 Q ss_pred cHHHHHHHHHHHHHhccccccccccccccCccccccccccccchhhHHHHHHHHHHHHHHHHHHhCCChHHhcccccccc Q lcl|Aclame:pro 230 KQEDVDTLREAMKSAKGPGNFRNLFMYAPNGKKDGIQLLPVSEVAAKDEFWNIKNVTRDDQLAAHRVPPQLMGIIPNNTG 309 (368) Q Consensus 230 ~~e~~~~~k~~~~~~~g~~n~~~~~~l~~~g~~~g~~~~pl~~~~~d~qf~e~~~~~~~~Ia~~fgVPp~~lg~~~~~~~ 309 (368) ++|+.+++++.|.. +..|+|+++++ +.|++|+|++.+++|+||+|++++++++||++|||||.+||... T Consensus 212 ~~e~~~~~~~~~~~--~~~n~g~~~vl-----~~g~~~~~l~~~~~d~q~~e~~~~~~~~Ia~afgVp~~~lg~~~---- 280 (382) T protein:vir:48 212 LLDFKTKLSRSRQA--MKQMQGGPLVL-----DDLEDFTPLEIKSNVSQLLKQADWTTGQFAKVYGIPDNVVGGQG---- 280 (382) T ss_pred ChHHHHHHHHHHHh--hccCCCCeeEc-----CCCceEEEccCChhHHHHHHHHHHHHHHHHHHhCCCHHHhCCCC---- Confidence 88888888888865 44688999888 57899999999999999999999999999999999999999743 Q ss_pred cccCHHHHHHHHHHHHHHHHHHHHH-HHHhhcCcc--------------eEeechhhhhcCChhhhhhhhhhcC Q lcl|Aclame:pro 310 GFGDVEKAAMVFARNEVKPLQDRLL-AINDWIGDE--------------VVRFAPYALGGHDQPAAAPGGQRSA 368 (368) Q Consensus 310 ~~sn~e~~~~~f~~~tl~P~~~~ie-~l~~~l~~~--------------~~~F~~~~Llr~D~~~ra~~~~~~~ 368 (368) ++++.+++.+.|++++|.|+++.|+ +++.+|.++ .++|+.+.|+++|..++.+..+..- T Consensus 281 ~~~~~~~~~~~~~~~~l~p~~~~i~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~t~~e~r~~l~ 354 (382) T protein:vir:48 281 DQQSSLEMSSDLYSKAVSRYLRPFLSELSQKLSCDVDADIFPAVDPTGSNYISRINSLVKTGTLAQNQGLYILQ 354 (382) T ss_pred CcccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhhhhhhhccchhHHHHHHHHHhhcCccCHHHHHHHHh Confidence 3357788899999999999999998 588877543 2467888999999999988765431 No 85 >protein:vir:4952 Length: 386 # NCBI annotation: portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:108 # MgeName: Sfi19 # Cross-refs: genbank:acc:NP_049928;genbank:gi:9632899;genbank:GeneID:1262075 Probab=100.00 E-value=2.1e-59 Score=342.28 Aligned_cols=330 Identities=9% Similarity=0.038 Sum_probs=250.2 Q ss_pred CCcCCCCccccccccccccccCCCcchhhccccCceEEEECCC---ceeccChHHHHHHHHHHhccchhcccccHHHHHH Q lcl|Aclame:pro 1 MSRNKTRRAARAASAHVRTANTDAPTEHHTDRAAQAEVFSFGD---PVEVLDRRELLDYVECMRMGQWYEPPMPWDGLAR 77 (368) Q Consensus 1 m~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~---p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~ 77 (368) |...+..++++........... ... .......+..|. +...+...+++.|+.++. ..++..|+.+. T Consensus 1 M~~f~~~~~~~~~~~~~~~~~~-----~~~-~~~~~~~~~~~~~v~~~~al~~~~v~~~i~~ia-~~ia~~p~~~~---- 69 (386) T protein:vir:49 1 MPIFNITNLATESPPINQESFF-----DIA-DSDFLASLNSSEWVSAENALKNSDLFSIISQLS-NDLATAKITTS---- 69 (386) T ss_pred CchhhhhccCCCCcccchhhhh-----hhh-hccccccccCCceechhhhhccHHHHHHHHHHH-HHhhhCceeec---- Confidence 8876554444332211111000 000 001111111122 234456677777777664 56777776532 Q ss_pred HHHhcccccchhhhccchHHhhccCCCCcCH-HHHHHHHHhHhhhCCeeEEEEecCCcceEEEEEecccccccccCCCe- Q lcl|Aclame:pro 78 SFRAAAHHSSAVYVKRNILVSTFIPHPLLSR-ATFERLVLDWQVFGNAYLERRENVLGGTIRLDTPLAKYVRRGLDLNT- 155 (368) Q Consensus 78 ~~r~~~~~~~~~~~~~~~~l~~~~~n~~~~~-~~~~~~~~~~ll~Gnay~~i~r~~~G~~~~L~~l~p~~v~~~~~~~~- 155 (368) + +....+...|||+++. +||+.++.+++++||||++|+|+..|++++|+|++|.+|++..+.++ T Consensus 70 --~------------~~~~~l~~~PN~~~t~~~f~~~~~~~lll~Gna~~~i~r~~~g~~~~l~~i~~~~v~v~~~~~~~ 135 (386) T protein:vir:49 70 --R------------KQLQGIVDNPSNNANRFNFYQSIFAQMLLGGEAFAYRWRNDNGRDMKWEYLRPSQVSFNRLDNQN 135 (386) T ss_pred --c------------chhhhhhhccCCCCCHHHHHHHHHHHhhhcCCEEEEEEECCCCcEEEEEEecCceeEEEEcCCCc Confidence 1 1122345689997765 78899999999999999999999999999999999999998776432 Q ss_pred --eEEEe----CCceEEEEcCccEEEecCCCCcCCccccchhhHHHHHHHHHHHHHHHHHHHHhccCCCceeEEeCCCCc Q lcl|Aclame:pro 156 --YFFVQ----NWQQPYTFAAGSVFHLQEPDINQEVYGLPEYLSALNATWLNESATLFRRRYYKNGSHAGFILYMTDAAQ 229 (368) Q Consensus 156 --~~~~~----~~~~~~~~~~~dviH~r~~~~~~~~~G~spi~~a~~~i~~~~~a~~~~~~~f~ng~~p~gil~~~~~~l 229 (368) +|.+. .++..+.|+++|||||+.+++.++++|+||+.+++.+|+++.++++|..++|+||++|++||++++ .+ T Consensus 136 ~~~y~~~~~~~~~~~~~~~~~~evih~~~~~~~~~~~G~s~l~~~~~~i~~~~~~~~~~~~~~~ng~~~~~il~~~~-~~ 214 (386) T protein:vir:49 136 GLYYNITFDDPHIAPKQHVPQNDILHFRLLSVDGGLTSVSPLMALGREFNIQKASDKLTISALKNALNANGILKIKG-GG 214 (386) T ss_pred eEEEEEEEcCccccceeEEccccEEEecCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHHHccCCccEEEEeCC-CC Confidence 34433 245678999999999999988777999999999999999999999999999999999999999986 57 Q ss_pred cHHHHHHHHHHHHHhccccccccccccccCccccccccccccchhhHHHHHHHHHHHHHHHHHHhCCChHHhcccccccc Q lcl|Aclame:pro 230 KQEDVDTLREAMKSAKGPGNFRNLFMYAPNGKKDGIQLLPVSEVAAKDEFWNIKNVTRDDQLAAHRVPPQLMGIIPNNTG 309 (368) Q Consensus 230 ~~e~~~~~k~~~~~~~g~~n~~~~~~l~~~g~~~g~~~~pl~~~~~d~qf~e~~~~~~~~Ia~~fgVPp~~lg~~~~~~~ 309 (368) ++++.+++++.|+. +..|+|+++++ +.|++|++++.+++|+||+|++++++++||++|||||++||.... T Consensus 215 ~~~~~~~~~~~~~~--~~~n~g~~~vl-----~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgVPp~~lg~~~~--- 284 (386) T protein:vir:49 215 LLDFKTKVSRSRQA--MKQMQGGPLVL-----DDLEDFTPLEIKSNVAQLLSQADWTTGQFAKVYGIPESIVGGDGD--- 284 (386) T ss_pred ChHHHHHHHHHHHH--hccCCCCceec-----CCCceEEEccCChhHHHHHHHHHHHHHHHHHHhCCCHHHhCCCCC--- Confidence 88888888888865 45789999988 678999999999999999999999999999999999999996433 Q ss_pred cccCHHHHHHHHHHHHHHHHHHHHH-HHHhhcCcceEeechhhhhcCChhhhhhhhhhcC Q lcl|Aclame:pro 310 GFGDVEKAAMVFARNEVKPLQDRLL-AINDWIGDEVVRFAPYALGGHDQPAAAPGGQRSA 368 (368) Q Consensus 310 ~~sn~e~~~~~f~~~tl~P~~~~ie-~l~~~l~~~~~~F~~~~Llr~D~~~ra~~~~~~~ 368 (368) +++|.++ .+.|+..+|.|+++.|+ +++++|+. .++|+...+++.|.+.++...+... T Consensus 285 ~~~~~~~-~~~~~~~~i~~~l~~i~~~~~~~l~~-~~~~~~~~~~~~d~~~~~~~~~~l~ 342 (386) T protein:vir:49 285 QQSSLEM-IYNIYFKSVSRYLRPFVSEMSKKLSC-EVDVDISPAVDPTGSNYISLINSMV 342 (386) T ss_pred ccchHHH-HHHHHHHHHHHHHHHHHHHHHHHhcc-hhcccchhhhccCHHHHHHHHHHHH Confidence 4455554 46788899999999997 58888875 4789999999999988877655443 No 86 >protein:vir:80134 Length: 403 # NCBI annotation: Phage portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:1877 # MgeName: bacteriophage bv1 # Cross-refs: genbank:acc:YP_001425602;genbank:gi:155042935;genbank:GeneID:5469563 Probab=100.00 E-value=2.7e-59 Score=341.69 Aligned_cols=336 Identities=14% Similarity=0.056 Sum_probs=245.5 Q ss_pred CCcCCCCccccccccccccccCCCcchhhccccCceEEEECCCce-eccChHHHHHHHHHHhccchhcccccHHHHHHHH Q lcl|Aclame:pro 1 MSRNKTRRAARAASAHVRTANTDAPTEHHTDRAAQAEVFSFGDPV-EVLDRRELLDYVECMRMGQWYEPPMPWDGLARSF 79 (368) Q Consensus 1 m~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~p~-~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~ 79 (368) |.-.+-.+++ ... .+.. +...... .......+..+. ......+|++|+.++. .+++..|+.+ + T Consensus 1 Mg~~~~f~~k-~~~-----~~~~-~~~~~~~--~~~~~~~~~~~~~~~~~~~~V~~~I~~ia-~~iA~~p~~~------~ 64 (403) T protein:vir:80 1 MGLFNFFRRK-TRS-----EPTN-AISWFLT--QEAYDTLAIPGYTRLSDNPEVRMAVHKIA-ELISSMTIHL------M 64 (403) T ss_pred Cccccccccc-ccc-----cccc-hhhhhcc--cccccccccchhhhhhhhHHHHHHHHHHH-HhhhhCceEE------E Confidence 8855321111 000 0000 0111111 111111112222 2223456777776554 5678888753 2 Q ss_pred Hhcccccchhhhccc-hHHhhccCCCCcCH-HHHHHHHHhHhh--hCCeeEEEEecCCcceEEEEEecccccccccCCCe Q lcl|Aclame:pro 80 RAAAHHSSAVYVKRN-ILVSTFIPHPLLSR-ATFERLVLDWQV--FGNAYLERRENVLGGTIRLDTPLAKYVRRGLDLNT 155 (368) Q Consensus 80 r~~~~~~~~~~~~~~-~~l~~~~~n~~~~~-~~~~~~~~~~ll--~Gnay~~i~r~~~G~~~~L~~l~p~~v~~~~~~~~ 155 (368) +.... +.. ..+|+ ..++...|||+++. +||+.++.++++ .||||+++.|+..|+|++|||++|..|++..+.++ T Consensus 65 ~~~~~-g~~-~~~~~~~~lL~~~PN~~~t~~~f~~~~v~~~ll~~~Gna~i~~~~~~~g~~~~L~~l~p~~v~~~~~~~g 142 (403) T protein:vir:80 65 QNTDN-GDI-RIKNELSRKIDINPYSLMTRKAWMYNIVYTMLLDGEGNSVVFPKYTTSGLIDELIPLAPSKVSFVDTDTG 142 (403) T ss_pred EecCC-cee-ecCChHHHHHhccCCcCCCHHHHHHHHHHHHhhcCCccEEEEEEEcCCCcEEEEEEEcCCeeEEEEcCCc Confidence 33222 222 23444 44566789998775 788899999988 58899999999999999999999999999888777 Q ss_pred eEEEeCCceEEEEcCccEEEec-CCCCcCCccccchhhHHHHHHHHHHHHHHHHHHHHhccCCCceeEEeCCCCccHHHH Q lcl|Aclame:pro 156 YFFVQNWQQPYTFAAGSVFHLQ-EPDINQEVYGLPEYLSALNATWLNESATLFRRRYYKNGSHAGFILYMTDAAQKQEDV 234 (368) Q Consensus 156 ~~~~~~~~~~~~~~~~dviH~r-~~~~~~~~~G~spi~~a~~~i~~~~~a~~~~~~~f~ng~~p~gil~~~~~~l~~e~~ 234 (368) |..+..+ ..|.++|||||+ .+.+.++++|+||+..++.+++...+++++..++|+||++|++||++++ .+++++. T Consensus 143 ~~~~y~~---~~~~~~eiih~~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~p~~il~~~~-~~~~~~~ 218 (403) T protein:vir:80 143 YQIWYQG---KAYNYDEVLHFIVNPDPEKPYMGRGYRVVLKDIVNNLKQATTTKKSFMSGKYMPSLIVKVDA-ATAELSS 218 (403) T ss_pred eEEEEee---cccchhhEEEEeccCCCcCccccccHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEeCC-CCChHHH Confidence 6443322 468899999999 4667789999999999999999999999999999999999999999875 5788888 Q ss_pred HHHHHHHHH-hccccccccccccccCccccccccccccchhhHHHHHHHHHHHHHHHHHHhCCChHHhcccccccccccC Q lcl|Aclame:pro 235 DTLREAMKS-AKGPGNFRNLFMYAPNGKKDGIQLLPVSEVAAKDEFWNIKNVTRDDQLAAHRVPPQLMGIIPNNTGGFGD 313 (368) Q Consensus 235 ~~~k~~~~~-~~g~~n~~~~~~l~~~g~~~g~~~~pl~~~~~d~qf~e~~~~~~~~Ia~~fgVPp~~lg~~~~~~~~~sn 313 (368) +++++.|.+ +.|..|+|+++++..++ ....+++|+ +++|+||+|.+++++++||++|||||++||..+ + T Consensus 219 ~~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~~l--~~~d~q~~e~~~~~~~~Ia~~fgVPp~~lg~~~-------~ 288 (403) T protein:vir:80 219 EEGRNAVFKKYLEASEAGQPWIIPAEL-LDVEQVKPL--SLKDLAIHETVELDKRTVAGIFGVPAFLLGVGK-------Y 288 (403) T ss_pred HHHHHHHHHHHhhhhhcCCeeeecccc-cccceeccC--CHHHHHHHHHHHHhHHHHHHHhCCCHHHcCCCC-------c Confidence 899999866 45778999998875433 234456665 578999999999999999999999999998632 2 Q ss_pred HHHHHHHHHHHHHHHHHHHHH-HHHhhcCc---ceEeechhhhhcCChhhhhhhhhhcC Q lcl|Aclame:pro 314 VEKAAMVFARNEVKPLQDRLL-AINDWIGD---EVVRFAPYALGGHDQPAAAPGGQRSA 368 (368) Q Consensus 314 ~e~~~~~f~~~tl~P~~~~ie-~l~~~l~~---~~~~F~~~~Llr~D~~~ra~~~~~~~ 368 (368) .+++...|+++||.|+++.|| +|+++|.. .+++||.+.|+++|.++|++..+..- T Consensus 289 ~~~~~~~f~~~~l~P~~~~ie~~l~~kll~~~~~~~~f~~~~ll~~d~~~~~~~~~~~~ 347 (403) T protein:vir:80 289 DKDEYNNFINSTILPIAKGIEQELTRKLLISPDLYFKFNPRSLYAYDLKELAEVGSNMY 347 (403) T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEeechhhhccCHHHHHHHHHHHH Confidence 245556799999999999999 59987743 36899999999999999998766654 No 87 >protein:vir:95378 Length: 406 # NCBI annotation: phage portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:1567 # MgeName: GBSV1 # Cross-refs: genbank:acc:YP_764474;genbank:gi:115334628;genbank:GeneID:5179265 Probab=100.00 E-value=1.4e-58 Score=337.80 Aligned_cols=340 Identities=13% Similarity=0.056 Sum_probs=249.8 Q ss_pred CCcCCCCccccccccccccccCCCcchhhccccCceEEEECCCceeccChHHHHHHHHHHhccchhcccccHHHHHHHHH Q lcl|Aclame:pro 1 MSRNKTRRAARAASAHVRTANTDAPTEHHTDRAAQAEVFSFGDPVEVLDRRELLDYVECMRMGQWYEPPMPWDGLARSFR 80 (368) Q Consensus 1 m~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~r 80 (368) |.-....++...++. . ............ +....+..-....++...++++|+.++. ..++..|+.+ ++ T Consensus 1 Mg~f~~~~~~~~~~~-~--~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~v~~~i~~ia-~~ia~~~~~~------~~ 68 (406) T protein:vir:95 1 MGLFDRWRRTKRKSK-I--RADTGYVGLFMS--GEDVSFLVPGYVRLSDNPEVRMAVHKIA-DLISSMTIYL------MQ 68 (406) T ss_pred Ccchhhhcccccccc-c--cccchhhhhhcc--CcccCccccCHHHHhhcHHHHHHHHHHH-HhhccCceEE------EE Confidence 665532221100000 0 001100000100 0000111111223445566777776654 5577777653 23 Q ss_pred hcccccchhhhccchHHhhccCCCCcCH-HHHHHHHHhHhhhCCe--eEEEEecCCcceEEEEEecccccccccCCCeeE Q lcl|Aclame:pro 81 AAAHHSSAVYVKRNILVSTFIPHPLLSR-ATFERLVLDWQVFGNA--YLERRENVLGGTIRLDTPLAKYVRRGLDLNTYF 157 (368) Q Consensus 81 ~~~~~~~~~~~~~~~~l~~~~~n~~~~~-~~~~~~~~~~ll~Gna--y~~i~r~~~G~~~~L~~l~p~~v~~~~~~~~~~ 157 (368) ... .+......+...++...|||+++. +||+.++.++++.||+ |+.+.|+..|+|++|+|++|.+|++..+.++|. T Consensus 69 ~~~-~~~~~~~~~~~~~l~~~PN~~~t~~~f~~~~~~~~ll~g~g~a~~~~~~~~~g~~~~l~~i~~~~v~~~~~~~~~~ 147 (406) T protein:vir:95 69 NTE-DGDIRIRNELSRKIDITPYSLMTRKSWMYNIVYTMLLDGEGNSVVFPKYTADGLIDELVPLTPSKVNFLDTPDGYQ 147 (406) T ss_pred ecC-CcceeecchHHHHHhhccCCCCCHHHHHHHHHHHHHhcCCceEEEEEEECCCCcEEEEEEEcCceeEEEEcCCeEE Confidence 332 223333333455677899998775 7889999999998765 556779999999999999999999998888765 Q ss_pred EEeCCceEEEEcCccEEEecC-CCCcCCccccchhhHHHHHHHHHHHHHHHHHHHHhccCCCceeEEeCCCCccHHHHHH Q lcl|Aclame:pro 158 FVQNWQQPYTFAAGSVFHLQE-PDINQEVYGLPEYLSALNATWLNESATLFRRRYYKNGSHAGFILYMTDAAQKQEDVDT 236 (368) Q Consensus 158 ~~~~~~~~~~~~~~dviH~r~-~~~~~~~~G~spi~~a~~~i~~~~~a~~~~~~~f~ng~~p~gil~~~~~~l~~e~~~~ 236 (368) +.. ++ ..|+++||||++. +.+.++++|+||+.++..+|.++.+++++..++|+||++|+|||++++ .+++++.++ T Consensus 148 ~~~-~~--~~~~~~evih~~~~~~~~~~~~G~s~i~~~~~~i~~~~~~~~~~~~~~~ng~~~~~il~~~~-~l~~e~~~~ 223 (406) T protein:vir:95 148 VLY-GG--QTFNYDEVLHFIYNPDPERPYIGRGYRVVLKDIADNLKQATATKKSFMSGKYMPSLIVKVDA-ATAELSSEE 223 (406) T ss_pred EEe-cc--EEEchhHEEEeeccCCCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEeCC-CCCHHHHHH Confidence 544 33 4689999999995 466689999999999999999999999999999999999999999875 589999999 Q ss_pred HHHHHHHh-ccccccccccccccCcccccccccccc-chhhHHHHHHHHHHHHHHHHHHhCCChHHhcccccccccccCH Q lcl|Aclame:pro 237 LREAMKSA-KGPGNFRNLFMYAPNGKKDGIQLLPVS-EVAAKDEFWNIKNVTRDDQLAAHRVPPQLMGIIPNNTGGFGDV 314 (368) Q Consensus 237 ~k~~~~~~-~g~~n~~~~~~l~~~g~~~g~~~~pl~-~~~~d~qf~e~~~~~~~~Ia~~fgVPp~~lg~~~~~~~~~sn~ 314 (368) +++.|++. .|..|+++++++..+ +.+++++. ++++|+||+|.+++++++||++|||||++||.. ++. T Consensus 224 ~~~~~~~~~~g~~n~~~~~v~~~~----~~~~~~~~~~~~~d~q~~e~~~~~~~~Ia~~fgVp~~~lg~~-------~~~ 292 (406) T protein:vir:95 224 GRNAVFKKYLQATEAGQPWIIPAE----LLEVEQVKPLSLKDIAINEAVELDKRTVAGMFGVPAFLLGIG-------EFN 292 (406) T ss_pred HHHHHHHHhccccccCCceeecCC----CccccccccCChhHHHHHHHHHHHHHHHHHHhCCCHHHcCCC-------Cch Confidence 99999775 567899999887543 34556654 689999999999999999999999999999853 245 Q ss_pred HHHHHHHHHHHHHHHHHHHH-HHHhhcCcc---eEeechhhhhcCChhhhhhhhhhcC Q lcl|Aclame:pro 315 EKAAMVFARNEVKPLQDRLL-AINDWIGDE---VVRFAPYALGGHDQPAAAPGGQRSA 368 (368) Q Consensus 315 e~~~~~f~~~tl~P~~~~ie-~l~~~l~~~---~~~F~~~~Llr~D~~~ra~~~~~~~ 368 (368) +++...|+++||.||++.|| +||++|... +++||.+.|+++|.+++++.+.+.- T Consensus 293 ~~~~~~~~~~~l~P~~~~ie~~l~~~l~~~~~~~~~fd~~~l~~~d~~~~~~~~~~l~ 350 (406) T protein:vir:95 293 RDEYNNFINSTILPIAKGIEQELTRKLLISPDLYFKFNPRSLYAYDLKELAEVGSNMY 350 (406) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcEEEeechhhhcCCHHHHHHHHHHHH Confidence 88889999999999999999 589877432 6999999999999999998776655 No 88 >protein:vir:98853 Length: 219 # NCBI annotation: hypothetical protein # Family: family:all:196 # MgeID: mge:1495 # MgeName: F108 # Cross-refs: genbank:acc:YP_654729;genbank:gi:109302914;genbank:GeneID:4156058 Probab=100.00 E-value=2.7e-58 Score=336.20 Aligned_cols=210 Identities=38% Similarity=0.657 Sum_probs=191.8 Q ss_pred cccccCCCeeEEEeC-----CceEEEEcCccEEEecCCCCcCCccccchhhHHHHHHHHHHHHHHHHHHHHhccCCCcee Q lcl|Aclame:pro 147 VRRGLDLNTYFFVQN-----WQQPYTFAAGSVFHLQEPDINQEVYGLPEYLSALNATWLNESATLFRRRYYKNGSHAGFI 221 (368) Q Consensus 147 v~~~~~~~~~~~~~~-----~~~~~~~~~~dviH~r~~~~~~~~~G~spi~~a~~~i~~~~~a~~~~~~~f~ng~~p~gi 221 (368) |++..+++.+|.+.. +|+..++.++||||||.+++.+++||+|||.+++.+|.++.++++|+.+||+||++|+|| T Consensus 1 ~r~~~dg~~~y~~~~~~~~~~g~~~~~~~~eilH~r~~~~~~~~~Glspi~~a~~~i~~~~aa~~~~~~~f~Ng~~p~gi 80 (219) T protein:vir:98 1 MRVCKDGNYKYLMKKSLYDTKSEIYEYNKNDVIFIKLYDPMQQVYGSPDYVGGITSALLNSDATIFRRRYYSNGAHMGFI 80 (219) T ss_pred CceeecCeEEEEEecceecCCceeEEeccccEEEecCCCCCCCcceecHHHHHHHHHHHHHHHHHHHHHHHhcCCCCceE Confidence 777777777666543 377899999999999999988999999999999999999999999999999999999999 Q ss_pred EEeCCCCccHHHHHHHHHHHHHhccccccccccccccCccccccccccccchhhHHHHHHHHHHHHHHHHHHhCCChHHh Q lcl|Aclame:pro 222 LYMTDAAQKQEDVDTLREAMKSAKGPGNFRNLFMYAPNGKKDGIQLLPVSEVAAKDEFWNIKNVTRDDQLAAHRVPPQLM 301 (368) Q Consensus 222 l~~~~~~l~~e~~~~~k~~~~~~~g~~n~~~~~~l~~~g~~~g~~~~pl~~~~~d~qf~e~~~~~~~~Ia~~fgVPp~~l 301 (368) |++++..+++|++++++++|++++|++|+++++++.++|.++|++|+|++++++|+||+|++++++++||++|||||++| T Consensus 81 l~~~~~~l~~e~~~~~~~~~~~~~g~~n~~~~~l~~~gg~~~G~~~~~~~~~~~d~qfle~rk~~~~eIa~~fgVPp~~l 160 (219) T protein:vir:98 81 LYSTDPDMTEEMEDEIAERIRDSKGVGNFRSMFVNIAGGHPDGLKVIPIGDTGQKDEFANIKNISAQDVLTSHRFPPGLS 160 (219) T ss_pred EEeCCCCCCHHHHHHHHHHHHHhcCcccccceeEecCCCCccceeEEEccCCHHHHHHHHHHHhhHHHHHHHhCCCHHHc Confidence 99888789999999999999999999999888888899988999999999999999999999999999999999999999 Q ss_pred cccccccccccCHHHHHHHHHHHHHHHHHHHHHH-HHhh-c-Cc-ceEeechhhhhcCC Q lcl|Aclame:pro 302 GIIPNNTGGFGDVEKAAMVFARNEVKPLQDRLLA-INDW-I-GD-EVVRFAPYALGGHD 356 (368) Q Consensus 302 g~~~~~~~~~sn~e~~~~~f~~~tl~P~~~~ie~-l~~~-l-~~-~~~~F~~~~Llr~D 356 (368) |+.+.+++||+|+|++++.|+++||.||+++||+ ||+. + ++ ..++|+.+.+...+ T Consensus 161 G~~~~~~~~~sn~eq~~~~f~~~tL~P~~~~ie~~ln~~~~~~~~~~~~F~~~~~~d~~ 219 (219) T protein:vir:98 161 GIIPVNTAGLGDPLKIREAYQADEVLPLQEIIAESINSDYEIKSALKVNFKQPEKRDKN 219 (219) T ss_pred ccccCCCCCccCHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCccEEeecCcccccCC Confidence 9988778999999999999999999999999995 8875 3 22 26889988887666 No 89 >protein:vir:78641 Length: 278 # NCBI annotation: portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:1855 # MgeName: tp310-2 # Cross-refs: genbank:acc:YP_001429941;genbank:gi:156603995;genbank:GeneID:5525387 Probab=100.00 E-value=1.5e-56 Score=326.63 Aligned_cols=264 Identities=13% Similarity=0.166 Sum_probs=223.4 Q ss_pred hhcccccHHHHHHHHHhcccccchhhhccc-hHHhhccCCCCcCH-HHHHHHHHhHhhhCCeeEEEEecCCcceEEEEEe Q lcl|Aclame:pro 65 WYEPPMPWDGLARSFRAAAHHSSAVYVKRN-ILVSTFIPHPLLSR-ATFERLVLDWQVFGNAYLERRENVLGGTIRLDTP 142 (368) Q Consensus 65 ~~~~p~~~~~l~~~~r~~~~~~~~~~~~~~-~~l~~~~~n~~~~~-~~~~~~~~~~ll~Gnay~~i~r~~~G~~~~L~~l 142 (368) ++..|+.+. +... ..+|+ ..++...|||+++. +||+.++.++++.||||++++|+..|++++|+|+ T Consensus 1 ia~l~~~~~------~~~~------~~~~~l~~lL~~~PN~~~t~~~f~~~~~~~ll~~Gna~~~i~r~~~G~~~~l~~l 68 (278) T protein:vir:78 1 MASLPLKMY------EDYK------VVNTEVSDLLTVSPNNSLSSFDFINQIETIRNEKGNAYVLIERDIYHQPSKLFLL 68 (278) T ss_pred CccceeEEE------ecCc------ccccHHHHHHHhcCCCCCCHHHHHHHHHHHHhhcCCEEEEEEECCCCcEEEEEEE Confidence 666676532 2111 12344 34455689998875 7888999999999999999999999999999999 Q ss_pred cccccccccCCCe---eE-EEeCCceEEEEcCccEEEecCCCCcCCccccchhhHHHHHHHHHHHHHHHHHHHHhccCCC Q lcl|Aclame:pro 143 LAKYVRRGLDLNT---YF-FVQNWQQPYTFAAGSVFHLQEPDINQEVYGLPEYLSALNATWLNESATLFRRRYYKNGSHA 218 (368) Q Consensus 143 ~p~~v~~~~~~~~---~~-~~~~~~~~~~~~~~dviH~r~~~~~~~~~G~spi~~a~~~i~~~~~a~~~~~~~f~ng~~p 218 (368) +|++|++..+.++ +| +...+|....|+++||||+|.+++.++++|+||+.++..++..+.++++++...|.| .| T Consensus 69 ~~~~v~v~~~~~~~~~~y~~~~~~g~~~~~~~~evih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~~--~~ 146 (278) T protein:vir:78 69 NPDVVEMLIENQSRELYYSIHAATGNKLIVHNMDMLHFKHIVASNMVQGISPIDVLKNTTDFDNAVRTFNLTEMQK--PD 146 (278) T ss_pred CCceeEEEEcCCCceEEEEEEcCCceEEEEccccEEEECCCCCCCCeeeccHHHHHHHHHHHHHHHHHHHHHHhcC--CC Confidence 9999999876553 34 344567888999999999999988899999999999999999999999997666655 47 Q ss_pred ceeEEeCCCCccHHHHHHHHHHHHHhccccccccccccccCccccccccccccchhhHHHHHHHHHHHHHHHHHHhCCCh Q lcl|Aclame:pro 219 GFILYMTDAAQKQEDVDTLREAMKSAKGPGNFRNLFMYAPNGKKDGIQLLPVSEVAAKDEFWNIKNVTRDDQLAAHRVPP 298 (368) Q Consensus 219 ~gil~~~~~~l~~e~~~~~k~~~~~~~g~~n~~~~~~l~~~g~~~g~~~~pl~~~~~d~qf~e~~~~~~~~Ia~~fgVPp 298 (368) +++++.+ ..+++|+.+++++.|++.. +|+|+++++ +.|++|++++++++|+||+|.+++++++||++||||| T Consensus 147 ~~i~~~~-~~l~~e~~~~~~~~~~~~~--~~~g~~~vl-----~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgVpp 218 (278) T protein:vir:78 147 SFMLKYG-SNVGKEKRQQVLEDFKQYY--EENGGILFQ-----EPGVEIEPLPKKYVSEDIVASENLTRERVANVFQLPS 218 (278) T ss_pred cEEEEeC-CCCCHHHHHHHHHHHHHHh--ccCCCceec-----CCCceEEEccCChhHHHHHHHHHHHHHHHHHHhCCCH Confidence 8998865 4689999999999998765 467888887 5789999999999999999999999999999999999 Q ss_pred HHhcccccccccccCHHHHHHHHHHHHHHHHHHHHH-HHHhhcCc-------ceEeechhhh Q lcl|Aclame:pro 299 QLMGIIPNNTGGFGDVEKAAMVFARNEVKPLQDRLL-AINDWIGD-------EVVRFAPYAL 352 (368) Q Consensus 299 ~~lg~~~~~~~~~sn~e~~~~~f~~~tl~P~~~~ie-~l~~~l~~-------~~~~F~~~~L 352 (368) .+||..++ ++++|++++.+.|+++||.|+++.|| ++|++|.+ .+++||.++| T Consensus 219 ~~lg~~~~--~~~sn~~~~~~~~~~~~l~P~~~~i~~~ln~~L~~~~e~~~g~~~~f~~~~l 278 (278) T protein:vir:78 219 VFLNARSN--TNFAKNEELNRFYLQHTLLPIVKQYEEEFNRKLLTKTDREKIGILNLTLNLI 278 (278) T ss_pred HHhCCCCC--CCcccHHHHHHHHHHHHHHHHHHHHHHHHHhhcCChhHhcCCceEEEecccC Confidence 99998754 68999999999999999999999998 58988753 2699999999 No 90 >protein:vir:79772 Length: 648 # NCBI annotation: portal protein # Family: family:all:3222 # MgeID: mge:1874 # MgeName: 0305phi8-36 # Cross-refs: genbank:acc:YP_001429612;genbank:gi:156564103;genbank:GeneID:5525537 Probab=100.00 E-value=1.4e-55 Score=321.34 Aligned_cols=359 Identities=10% Similarity=0.046 Sum_probs=236.7 Q ss_pred CCcCC------CCcccccc--cccc--ccccCCCcchhhc---cccCceEEEECCCceeccChHHHHHHHHHHhcc-chh Q lcl|Aclame:pro 1 MSRNK------TRRAARAA--SAHV--RTANTDAPTEHHT---DRAAQAEVFSFGDPVEVLDRRELLDYVECMRMG-QWY 66 (368) Q Consensus 1 m~~~k------~~~~~~~~--~~~~--~~~~~~~~~~~~~---~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~-~~~ 66 (368) |+++- ++...-.+ ++.+ .....+.-...++ +..+.......++|....-.+....+......+ ++. T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~d~~~~~~~r~g~~~~~~~~g~~~~~ 80 (648) T protein:vir:79 1 MARKVWGRGFWSRISLMWRDEDDDKEPLVLEESMQLGEAPGAMPKGGGGGGSAKRDPKMSLVKRIGLAIMDGGGGGRDFE 80 (648) T ss_pred CccchhcchhhhhhhhhccCccccccccccccccccCCCccccCCCCcccccccccchhHHHHHhHHHHHhhcCCccccc Confidence 76431 11111111 0001 0001111111111 111222333455665443333222233222222 467 Q ss_pred cccccHHHHHHHHHhcccccchhhhc---------------------cchHHhhccCCCCcCH-HHHHHHHHhHhhhCCe Q lcl|Aclame:pro 67 EPPMPWDGLARSFRAAAHHSSAVYVK---------------------RNILVSTFIPHPLLSR-ATFERLVLDWQVFGNA 124 (368) Q Consensus 67 ~~p~~~~~l~~~~r~~~~~~~~~~~~---------------------~~~~l~~~~~n~~~~~-~~~~~~~~~~ll~Gna 124 (368) .+|+++..+..+++.++++.+|+..- ++..++...||++++. +||+.++.+++++||| T Consensus 81 epp~d~~~l~~l~~~np~V~~aI~iia~~ia~l~~~i~~~~~~~~~~~~~~~ll~rPn~~~t~~~f~~~l~~~lll~GNA 160 (648) T protein:vir:79 81 EPEFDFNEITSAYNTEGYVRQAVDKYIEMMFKADWDFVSKNPNAVEYIRMRFTLMAEATQIPTNQLFIEIAEDLVKYCNV 160 (648) T ss_pred cCCcCHHHHHHHHhcChHHHHHHHHHHHHHhhCcceEEecCCccchhhHHHHHhhccCCCCCHHHHHHHHHHHHHhcCCe Confidence 78998888888777777766665211 1223455689998765 7899999999999999 Q ss_pred eEEEEecCCcc---------------eEEEEEecccccccccCCCe---eEEE--eCCceEEEEcCccEEEecCCCCcCC Q lcl|Aclame:pro 125 YLERRENVLGG---------------TIRLDTPLAKYVRRGLDLNT---YFFV--QNWQQPYTFAAGSVFHLQEPDINQE 184 (368) Q Consensus 125 y~~i~r~~~G~---------------~~~L~~l~p~~v~~~~~~~~---~~~~--~~~~~~~~~~~~dviH~r~~~~~~~ 184 (368) |++|+|+.+|. +.+|+|++|.+|++..+..+ +|.+ ..++..+.|.++||||||.+.+.++ T Consensus 161 YveiiRd~~G~~~~~l~~~~~~~~~~v~~l~pl~p~~v~v~~d~~g~~~~Y~y~~~g~~~~~~~~~~dIIHik~~~~~d~ 240 (648) T protein:vir:79 161 VIAKSRAKDALPFQGMNVMGVGDSMPVAGYFPLNLASMKVKRDKFGMIKGWQQEQEGQDKPQKFKPEDIVHIYYKREKGR 240 (648) T ss_pred EEEEEecCCCccchhhhhhhhccccceeeeEeecCceeEEEEcCCCceeeeEEEecCCceeEEecCccEEEEccCCCCCC Confidence 99999998873 47899999999998766543 2322 3445667899999999998877899 Q ss_pred ccccchhhHHHHHHHHHHHHHHHHHHHHhccCCCceeEEeCCCCccHHHHHHHHHHHHHhccccccccccccccCccccc Q lcl|Aclame:pro 185 VYGLPEYLSALNATWLNESATLFRRRYYKNGSHAGFILYMTDAAQKQEDVDTLREAMKSAKGPGNFRNLFMYAPNGKKDG 264 (368) Q Consensus 185 ~~G~spi~~a~~~i~~~~~a~~~~~~~f~ng~~p~gil~~~~~~l~~e~~~~~k~~~~~~~g~~n~~~~~~l~~~g~~~g 264 (368) +||+|||.+++++|+++.++++|..+||+||++|+|||+++......++.+++++.|++...+.+.+... ..... T Consensus 241 ~~GlSpi~~a~~aI~l~~aa~~~~~~fF~NGa~P~gil~~~~~~~~~e~~k~~~e~~~~~~~~~~i~gg~-----v~~~~ 315 (648) T protein:vir:79 241 AFGTPWLLPALDDIRALRQVEENVLRLVYRNLHPLWHVKVGLEQEGFGAEEGEVDLVRGEVENMDVEGGM-----VTTER 315 (648) T ss_pred ceeccHHHHHHHHHHHHHHHHHHHHHHHhccCCccEEEEeCCCccchHHHHHHHHHHHHhcccccccccc-----cccce Confidence 9999999999999999999999999999999999999998643445555566666676554332211111 11223 Q ss_pred cccccccchhhHHHHHHHHHHHHHHHHHHhCCChHHhcccccccccccCHHHHHHHHHHHHHHHHHHHHH-----HHHhh Q lcl|Aclame:pro 265 IQLLPVSEVAAKDEFWNIKNVTRDDQLAAHRVPPQLMGIIPNNTGGFGDVEKAAMVFARNEVKPLQDRLL-----AINDW 339 (368) Q Consensus 265 ~~~~pl~~~~~d~qf~e~~~~~~~~Ia~~fgVPp~~lg~~~~~~~~~sn~e~~~~~f~~~tl~P~~~~ie-----~l~~~ 339 (368) +.+.+. .+++|+||+|++++++++||++|||||++||+.++ +++++.+++...| ..++.|++..++ ++++. T Consensus 316 ~~i~~~-~s~~dlqfle~rk~~~~eIa~aFgVPP~lLG~~~~--ss~stae~~~~~~-~~~i~~l~~~i~~~le~~~~~~ 391 (648) T protein:vir:79 316 VNISSI-ASNQIIDAKEYLKHFEQRAFTVLGVSELMMGRGGT--ASRSTGDNLSSDF-KDRIKALQKVMATFINEFMVKE 391 (648) T ss_pred eecccc-CCHHHHHHHHHHHHHHHHHHHHhCCCHhHcccCCC--ccchHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHH Confidence 333333 26789999999999999999999999999998643 6778888776655 556777665443 12221 Q ss_pred ----------cC-cceEeechhhhhcCChhhhhhhhhhcC Q lcl|Aclame:pro 340 ----------IG-DEVVRFAPYALGGHDQPAAAPGGQRSA 368 (368) Q Consensus 340 ----------l~-~~~~~F~~~~Llr~D~~~ra~~~~~~~ 368 (368) +. ..+++|++++|+++|.+++++.+.+.. T Consensus 392 ll~e~~l~~~l~~d~~ieF~~~~Llr~D~~~~a~~~~~l~ 431 (648) T protein:vir:79 392 ILMEGGFDPVLNPDDKVEFRFNEIDMDSKIKLENQAVFLY 431 (648) T ss_pred HhhhhhccccccccceEEEeecccchhhHHHHHHHHHHHH Confidence 22 235899999999999999998776532 No 91 >protein:vir:6210 Length: 394 # NCBI annotation: Portal protein # Family: family:all:10882 # MgeID: mge:128 # MgeName: phBC6A52 # Cross-refs: genbank:acc:NP_852590;genbank:gi:31415850;genbank:GeneID:1489208 Probab=100.00 E-value=3.9e-56 Score=324.38 Aligned_cols=326 Identities=12% Similarity=0.029 Sum_probs=235.4 Q ss_pred CC---cCCCCccccccccccccccCCCcchhhccccCceEEEECCC---ceeccChHHHHHHHHHHhccchhcccccHHH Q lcl|Aclame:pro 1 MS---RNKTRRAARAASAHVRTANTDAPTEHHTDRAAQAEVFSFGD---PVEVLDRRELLDYVECMRMGQWYEPPMPWDG 74 (368) Q Consensus 1 m~---~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~---p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 74 (368) |. |-+.+.. .+.. .+.. ..+..... . ...|. +..++...+++.|+.++. ..++..|+.++ T Consensus 1 MGl~~~~~~~~~---~~~~---~~~~--~~~~~~~~---~-~~~~~~vt~~~al~~~~v~~~i~~Ia-~~iA~lp~~v~- 66 (394) T protein:vir:62 1 MGLRDRFSNYLF---KKAE---KRGY--LDNVLGKS---I-RYSGVYVTDSNILQSSDVYELLQDIS-NQMVLADIVVE- 66 (394) T ss_pred Cchhhhhhhhcc---CCCC---chhh--hhhhhhcc---c-ccCccccChhhhhccHHHHHHHHHHH-HhhcccceEEE- Confidence 55 3222211 1111 1111 11111110 1 11122 223455566666666554 56788887542 Q ss_pred HHHHHHhcccccchhhhccchHHhhccCCCCcCH-HHHHHHHHhHhhhCCeeEEEEecCCcceEEEEEecccccccccCC Q lcl|Aclame:pro 75 LARSFRAAAHHSSAVYVKRNILVSTFIPHPLLSR-ATFERLVLDWQVFGNAYLERRENVLGGTIRLDTPLAKYVRRGLDL 153 (368) Q Consensus 75 l~~~~r~~~~~~~~~~~~~~~~l~~~~~n~~~~~-~~~~~~~~~~ll~Gnay~~i~r~~~G~~~~L~~l~p~~v~~~~~~ 153 (368) +.++ . ...+|+.+.+...|||++++ +||+.++.+++++||+|++|.++..+.+ ..+.+..+. T Consensus 67 -----~~~g---~-~~~~~~~~~Ll~~PN~~~t~~~f~~~~~~~lll~Gn~~~~i~~~~~~~~--------~~~~~~~~~ 129 (394) T protein:vir:62 67 -----DEFG---N-EIKDDIALQILRNPNNYLTQSEFIKLMTNTYLLEGETFPILNGAQIHLA--------SNVFTELDD 129 (394) T ss_pred -----cCCC---c-ccchhhHHHHhccCCCCCCHHHHHHHHHHHHHhcCCeEEEEecceeecc--------ccceEEECC Confidence 2222 1 23456666666789998875 7888999999999999999976543322 234444555 Q ss_pred CeeEEEeCCceEEEEcCccEEEecCCCCcCCccccchhhHHHHHHHHHHHHHHHHHHHHhccCCCceeEEeCCCC-ccHH Q lcl|Aclame:pro 154 NTYFFVQNWQQPYTFAAGSVFHLQEPDINQEVYGLPEYLSALNATWLNESATLFRRRYYKNGSHAGFILYMTDAA-QKQE 232 (368) Q Consensus 154 ~~~~~~~~~~~~~~~~~~dviH~r~~~~~~~~~G~spi~~a~~~i~~~~~a~~~~~~~f~ng~~p~gil~~~~~~-l~~e 232 (368) ++++.+..++ ++|+++||||+|.++. |+++|+||+..+..+|..+.++++|..++|+||++|+|||+++... .+++ T Consensus 130 ~~~~~~~~~~--~~~~~~eiih~r~~~~-d~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~il~~~~~~~~~~~ 206 (394) T protein:vir:62 130 NLVEHFNIGG--HEIPPCMIRHVKNIGA-DHLRGKGILDLGRDTLEGVMSAEKTLTDKYKKGGLLTFLLNLDAHINPQNG 206 (394) T ss_pred ceEEEEeeCC--EEechhheEEecCcCC-CCccccChHHHHHHHHHHHHHHHHHHHHHHHccCCcceEEEeCCCCCcCHH Confidence 6666665554 5789999999998874 7899999999999999999999999999999999999999987542 3566 Q ss_pred HHHHHHHHHHHh-ccccccccccccccCccccccccccccchhhHHHHHHHHHHHHHHHHHHhCCChHHhcccccccccc Q lcl|Aclame:pro 233 DVDTLREAMKSA-KGPGNFRNLFMYAPNGKKDGIQLLPVSEVAAKDEFWNIKNVTRDDQLAAHRVPPQLMGIIPNNTGGF 311 (368) Q Consensus 233 ~~~~~k~~~~~~-~g~~n~~~~~~l~~~g~~~g~~~~pl~~~~~d~qf~e~~~~~~~~Ia~~fgVPp~~lg~~~~~~~~~ 311 (368) +++++++.|++. .|..|+|+++++..+ .++++++++.+++|+||+|++++++++||++|||||++||. .++ T Consensus 207 ~~~~~~~~~~~~~~g~~n~g~~~vl~~g---~~~~~~~l~~~~~d~q~~e~~~~~~~~Ia~~fgVPp~~lg~-----~~~ 278 (394) T protein:vir:62 207 AQSKLINAILDQLESIDEARSVKMIPLG---KGYSIDTLKSPLDDEKTLAYLNVYKKDLGKFLGINVDTYTE-----LIK 278 (394) T ss_pred HHHHHHHHHHHHhccccccCceeEeeCC---CceeEEecCCCcchHHHHHHHHHHHHHHHHHhCCCHHHcCC-----CCC Confidence 789999999775 466899999888432 35678899999999999999999999999999999999985 356 Q ss_pred cCHHHHHHHHHHHHHHHHHHHHH-HHHhhcCcc------eEeechhhhhcCChhhhhhhhhhcC Q lcl|Aclame:pro 312 GDVEKAAMVFARNEVKPLQDRLL-AINDWIGDE------VVRFAPYALGGHDQPAAAPGGQRSA 368 (368) Q Consensus 312 sn~e~~~~~f~~~tl~P~~~~ie-~l~~~l~~~------~~~F~~~~Llr~D~~~ra~~~~~~~ 368 (368) +|+|++.+.|+++||.||+++|| +|+++|... +|+||...++++|..+++......+ T Consensus 279 sn~e~~~~~~~~~~l~P~~~~ie~~l~~kll~~~~~~~~~~~fd~~~~~~~~~~~~~~~~~~~~ 342 (394) T protein:vir:62 279 EDIEKAMMYIHNKAVRPIMKNFEDHLSLLFYAQNSGKRIKFKINILDFVTYSNKTNIGYNLVRT 342 (394) T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCccccCceEEEechhhhcCHHHHHHHHHHHHhC Confidence 89999999999999999999998 588876432 5899999999888766554322222 No 92 >protein:vir:95965 Length: 385 # NCBI annotation: ORF011 # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:1594 # MgeName: 2638A # Cross-refs: genbank:acc:YP_239800;genbank:gi:66395461;genbank:GeneID:5132882 Probab=100.00 E-value=6.5e-52 Score=301.23 Aligned_cols=320 Identities=12% Similarity=0.059 Sum_probs=229.9 Q ss_pred CCcCCCCccccccccccccccCCCcchhhccccCceEEEECCCceeccChHHHHHHHHHHhccchhcccccHHHHHHHHH Q lcl|Aclame:pro 1 MSRNKTRRAARAASAHVRTANTDAPTEHHTDRAAQAEVFSFGDPVEVLDRRELLDYVECMRMGQWYEPPMPWDGLARSFR 80 (368) Q Consensus 1 m~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~r 80 (368) |+-.+...++... +.... ..+.+........+...++..|+.++. +.++..|+.+. + T Consensus 1 Mg~f~~~f~~~~~-------~~~~~---------~~~~~~~~~~~~a~~~~~v~~~i~~ia-~~ia~~p~~~~------~ 57 (385) T protein:vir:95 1 MGLFDSVFKRHSE-------LSWMY---------DLEFLQDKSKKAYLKQIALNTVVEMVA-RTISQSEFRVM------K 57 (385) T ss_pred CchhhhhhccCcc-------ccccc---------chhhhhccchhhhhhhHHHHHHHHHHH-HHHcccceeee------e Confidence 8876543332110 11100 011111112334456677777777654 56788887542 2 Q ss_pred hcccccchhhhccc-hHHhhccCCCCcCH-HHHHHHHHhHhhhCCeeEEEEecCCcceEEEEEecccccccccCCCeeEE Q lcl|Aclame:pro 81 AAAHHSSAVYVKRN-ILVSTFIPHPLLSR-ATFERLVLDWQVFGNAYLERRENVLGGTIRLDTPLAKYVRRGLDLNTYFF 158 (368) Q Consensus 81 ~~~~~~~~~~~~~~-~~l~~~~~n~~~~~-~~~~~~~~~~ll~Gnay~~i~r~~~G~~~~L~~l~p~~v~~~~~~~~~~~ 158 (368) .. . ..+|+ ..++...|||+++. +||+.++.++++.||||+++.+++ +.++.++++.+..+......-.... T Consensus 58 ~~----~--~~~~~l~~lL~~~PN~~~t~~~f~~~~~~~l~l~Gna~i~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (385) T protein:vir:95 58 NN----T--KEKGTLYYLLNVRPNRNQNAVDFWQKFIFKLIMDNEVLVVKNDEG-HFFVADDFEKEDELGLYSHRFTNVL 130 (385) T ss_pred cC----c--cccchHHHHHhcccCcCCCHHHHHHHHHHHHhhcCceEEEEecCC-Ceeeccccccccccccccccceeee Confidence 11 1 12344 34555789998875 788999999999999999988765 4566666666665554332211112 Q ss_pred EeCCceEEEEcCccEEEecCCCCcCCccccchhhHHHHHHHHHHHHHHHHHHHHhccCCCceeEEeCC-CCccHHHHHHH Q lcl|Aclame:pro 159 VQNWQQPYTFAAGSVFHLQEPDINQEVYGLPEYLSALNATWLNESATLFRRRYYKNGSHAGFILYMTD-AAQKQEDVDTL 237 (368) Q Consensus 159 ~~~~~~~~~~~~~dviH~r~~~~~~~~~G~spi~~a~~~i~~~~~a~~~~~~~f~ng~~p~gil~~~~-~~l~~e~~~~~ 237 (368) +...+....++++||||+|.+++.+..+|+||+..++.++..+.++.. | ++.|+|+|+++. ..+++|+.+++ T Consensus 131 ~~~~~~~~~~~~~eiih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~-----~--~~~~~g~l~~~~~~~~~~e~~~~~ 203 (385) T protein:vir:95 131 VNDFEFKRVFTMDDVIYLKYNNQKLDAFSLGLFEDYGEIFGRMIDLQM-----L--NNQIRGILKVDATKFYNKEKQKEL 203 (385) T ss_pred ecccceeeeeccccEEEecCCCCCcccccchHHHHHHHHHHHHHHHHH-----h--cCCCceEEEeCCccCCCHHHHHHH Confidence 223345578999999999999887778999999999999987766543 2 334788888763 45799999999 Q ss_pred HHHHHHhc-ccccccc-ccccccCccccccccccccc------hhhHHHHHHHHHHHHHHHHHHhCCChHHhcccccccc Q lcl|Aclame:pro 238 REAMKSAK-GPGNFRN-LFMYAPNGKKDGIQLLPVSE------VAAKDEFWNIKNVTRDDQLAAHRVPPQLMGIIPNNTG 309 (368) Q Consensus 238 k~~~~~~~-g~~n~~~-~~~l~~~g~~~g~~~~pl~~------~~~d~qf~e~~~~~~~~Ia~~fgVPp~~lg~~~~~~~ 309 (368) ++.|++.+ |..|.+. ++++ ++|++|+++++ +++|+||+|++++++++||++|||||++|+ + T Consensus 204 ~~~~~~~~~g~~~~~~~i~~l-----~~g~~~~~l~~~~~~~~s~~d~~~~e~~~~~~~~Ia~~fgVpp~~l~------~ 272 (385) T protein:vir:95 204 QAYIDTLFDAFQNNTIAVVPL-----TEGLAYEEHSNRGAAQSAQQFSELNELKKTVLTDVARMIGVPPSLVL------G 272 (385) T ss_pred HHHHHHHhhhhhhcCCceEEc-----CCCceeEeecccccccCCHHHHHHHHHHHHHHHHHHHHhCCCHHHhc------C Confidence 99998875 4445444 4555 57889999875 667999999999999999999999999995 5 Q ss_pred cccCHHHHHHHHHHHHHHHHHHHHHH-HHhhcCcc------eEeechhhhhcCChhhhhhhhhhcC Q lcl|Aclame:pro 310 GFGDVEKAAMVFARNEVKPLQDRLLA-INDWIGDE------VVRFAPYALGGHDQPAAAPGGQRSA 368 (368) Q Consensus 310 ~~sn~e~~~~~f~~~tl~P~~~~ie~-l~~~l~~~------~~~F~~~~Llr~D~~~ra~~~~~~~ 368 (368) +++|+|++.+.|+++||.||+..||+ +|++|.+. +++||.+.|+++|.+++++..++.- T Consensus 273 ~~sn~e~~~~~~~~~~l~P~~~~ie~~l~~~L~~~~~~~~~~~~fd~~~l~~~D~~~~~~~~~~~~ 338 (385) T protein:vir:95 273 EMADLEKTIESYLQFCINPLLRKIEAELNSKFFYQDEYLNDDMHIKVVGIDKRDPLKLSEAIDKLV 338 (385) T ss_pred CCcCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCChhhcccceEEEechhhhccCHHHHHHHHHHHH Confidence 78999999999999999999999995 88877543 5899999999999999999876543 No 93 >protein:vir:100650 Length: 395 # NCBI annotation: 77ORF008 # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:1476 # MgeName: 77 # Cross-refs: genbank:acc:NP_958604;genbank:gi:41189523;genbank:GeneID:2743796 Probab=100.00 E-value=8.1e-52 Score=300.69 Aligned_cols=318 Identities=13% Similarity=0.075 Sum_probs=228.7 Q ss_pred CCcCCCCccccccccccccccCCCcchhhccccCceEEEECCCceeccChHHHHHHHHHHhccchhcccccHHHHHHHHH Q lcl|Aclame:pro 1 MSRNKTRRAARAASAHVRTANTDAPTEHHTDRAAQAEVFSFGDPVEVLDRRELLDYVECMRMGQWYEPPMPWDGLARSFR 80 (368) Q Consensus 1 m~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~r 80 (368) |+--+.-.+++... ... .+ ..++..-.....+...+++.|+..+. +.++..|+.+. + T Consensus 1 Mg~f~~lf~~~~~~--~~~----------~~----~~~~~~v~~~~~~~~~~v~~~i~~Ia-~~iA~~p~~~~------~ 57 (395) T protein:vir:10 1 MSILEKIFKTRKDI--TYM----------LD----LDMIEDLSQQAYVKRLAIDSCIEFVA-RAVAQSHFKVL------E 57 (395) T ss_pred CchhhhhhccCccc--ccc----------cc----chhccccchhhhhhhHHHHHHHHHHH-HhhccceeEec------c Confidence 88654332221110 000 00 11111011222345566666666544 56777787542 2 Q ss_pred hcccccchhhhccc-hHHhhccCCCCcCH-HHHHHHHHhHhhhCCeeEEEEecCCcceEEEEEecccccccccCC-Cee- Q lcl|Aclame:pro 81 AAAHHSSAVYVKRN-ILVSTFIPHPLLSR-ATFERLVLDWQVFGNAYLERRENVLGGTIRLDTPLAKYVRRGLDL-NTY- 156 (368) Q Consensus 81 ~~~~~~~~~~~~~~-~~l~~~~~n~~~~~-~~~~~~~~~~ll~Gnay~~i~r~~~G~~~~L~~l~p~~v~~~~~~-~~~- 156 (368) . + ...+|+ ..++...|||+++. +||+.++.++++.|++|+++.+++. ++++++..++..... +.+ T Consensus 58 ~----~--~~~~~~~~~ll~~~PN~~~t~~~f~~~~~~~lll~g~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~ 126 (395) T protein:vir:10 58 G----N--RIQKNDVYYKLNIKPNTDLSSDSFWQQVIYKLIYDNEVLIVVSDSKE-----LLIADSFYREEYALYDDIFK 126 (395) T ss_pred C----C--ccccchHHHHHHhccCcCCCHHHHHHHHHHHHhhCCceEEEEecCCC-----eEecCCccceeEeecCccee Confidence 1 1 123444 34455689998775 7888999999999999987766532 455554444432222 222 Q ss_pred -EEEeCCceEEEEcCccEEEecCCCCcCCccccchhhHHHHHHHHHHHHHHHHHHHHhccCCCceeEEeCCCCccHHHHH Q lcl|Aclame:pro 157 -FFVQNWQQPYTFAAGSVFHLQEPDINQEVYGLPEYLSALNATWLNESATLFRRRYYKNGSHAGFILYMTDAAQKQEDVD 235 (368) Q Consensus 157 -~~~~~~~~~~~~~~~dviH~r~~~~~~~~~G~spi~~a~~~i~~~~~a~~~~~~~f~ng~~p~gil~~~~~~l~~e~~~ 235 (368) +.+...+....++++||||+|.+++.+..||+||+..++.++..+.+ .|++|+.++|+|.+++..+++++++ T Consensus 127 ~~~~~~~~~~~~~~~~evih~~~~~~~~~~~G~spi~~~~~~~~~~~~-------~~~~~~~~~gii~~~~~~~~~e~~~ 199 (395) T protein:vir:10 127 DVTVKDYTYQRTFTMQEVIYLKYNNNKVTHFVESLFEDYGKIFGRMIG-------AQLKNYQIRGILKSASSAYDEKNIE 199 (395) T ss_pred EEEEcCceeeeeeccccEEEEccCCCCcccccchHHHHHHHHHHHHHH-------HHHhcCCCceEEEeCCCCCCHHHHH Confidence 23334445678999999999988888888999999999988876553 4677888999999888788999999 Q ss_pred HHHHHHHHhccccccccccccccCccccccccccccchhhHH-----HHHHHHHHHHHHHHHHhCCChHHhccccccccc Q lcl|Aclame:pro 236 TLREAMKSAKGPGNFRNLFMYAPNGKKDGIQLLPVSEVAAKD-----EFWNIKNVTRDDQLAAHRVPPQLMGIIPNNTGG 310 (368) Q Consensus 236 ~~k~~~~~~~g~~n~~~~~~l~~~g~~~g~~~~pl~~~~~d~-----qf~e~~~~~~~~Ia~~fgVPp~~lg~~~~~~~~ 310 (368) ++++.|++.+++.|+++..++.. ++|++|+++++++.++ ||+|++++++++||++|||||++|| ++ T Consensus 200 ~~~~~~~~~~~~~~~~~~~v~~l---~~g~~~~~l~~~~~~~~~~~~q~~e~~~~~~~~Ia~~f~VPp~~l~------~~ 270 (395) T protein:vir:10 200 KLQAFTNKLFNTFNKNQLAIAPL---IEGFDYEELSNGGKNSNMPFSELSELMRDAIKNVALMIGIPPGLIY------GE 270 (395) T ss_pred HHHHHHHHHhccccccCcceEEc---CCCceeeeccccccccchhHHHHHHHHHHHHHHHHHHhCCCHHHhc------Cc Confidence 99999999888777776655421 4678999999988765 9999999999999999999999996 47 Q ss_pred ccCHHHHHHHHHHHHHHHHHHHHH-HHHhhcCcc-----eEeechhhhhcCChhhhhhhhhhcC Q lcl|Aclame:pro 311 FGDVEKAAMVFARNEVKPLQDRLL-AINDWIGDE-----VVRFAPYALGGHDQPAAAPGGQRSA 368 (368) Q Consensus 311 ~sn~e~~~~~f~~~tl~P~~~~ie-~l~~~l~~~-----~~~F~~~~Llr~D~~~ra~~~~~~~ 368 (368) ++|+|++.+.|+++||.|++..|| ++|++|.+. .++||.+.|+++|.+++++..++.- T Consensus 271 ~sn~e~~~~~~~~~~l~P~~~~ie~~l~~kL~~~~~~~~~~~f~~~~l~~~D~~~~~~~~~~~~ 334 (395) T protein:vir:10 271 TADLEKNTLVFEKFCLTPLLKKIQNELNAKLITQSMYLKDTRIEIVGVNKKDPLQYAEAIDKLV 334 (395) T ss_pred ccCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcChhhhcccceecchhhhccCHHHHHHHHHHHH Confidence 899999999999999999999998 599887542 3789999999999999999776444 No 94 >protein:vir:101289 Length: 395 # NCBI annotation: phage portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:1591 # MgeName: phiNM3 # Cross-refs: genbank:acc:YP_908829;genbank:gi:118725093;genbank:GeneID:4555860 Probab=100.00 E-value=8.1e-52 Score=300.69 Aligned_cols=318 Identities=13% Similarity=0.075 Sum_probs=228.7 Q ss_pred CCcCCCCccccccccccccccCCCcchhhccccCceEEEECCCceeccChHHHHHHHHHHhccchhcccccHHHHHHHHH Q lcl|Aclame:pro 1 MSRNKTRRAARAASAHVRTANTDAPTEHHTDRAAQAEVFSFGDPVEVLDRRELLDYVECMRMGQWYEPPMPWDGLARSFR 80 (368) Q Consensus 1 m~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~r 80 (368) |+--+.-.+++... ... .+ ..++..-.....+...+++.|+..+. +.++..|+.+. + T Consensus 1 Mg~f~~lf~~~~~~--~~~----------~~----~~~~~~v~~~~~~~~~~v~~~i~~Ia-~~iA~~p~~~~------~ 57 (395) T protein:vir:10 1 MSILEKIFKTRKDI--TYM----------LD----LDMIEDLSQQAYVKRLAIDSCIEFVA-RAVAQSHFKVL------E 57 (395) T ss_pred CchhhhhhccCccc--ccc----------cc----chhccccchhhhhhhHHHHHHHHHHH-HhhccceeEec------c Confidence 88654332221110 000 00 11111011222345566666666544 56777787542 2 Q ss_pred hcccccchhhhccc-hHHhhccCCCCcCH-HHHHHHHHhHhhhCCeeEEEEecCCcceEEEEEecccccccccCC-Cee- Q lcl|Aclame:pro 81 AAAHHSSAVYVKRN-ILVSTFIPHPLLSR-ATFERLVLDWQVFGNAYLERRENVLGGTIRLDTPLAKYVRRGLDL-NTY- 156 (368) Q Consensus 81 ~~~~~~~~~~~~~~-~~l~~~~~n~~~~~-~~~~~~~~~~ll~Gnay~~i~r~~~G~~~~L~~l~p~~v~~~~~~-~~~- 156 (368) . + ...+|+ ..++...|||+++. +||+.++.++++.|++|+++.+++. ++++++..++..... +.+ T Consensus 58 ~----~--~~~~~~~~~ll~~~PN~~~t~~~f~~~~~~~lll~g~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~ 126 (395) T protein:vir:10 58 G----N--RIQKNDVYYKLNIKPNTDLSSDSFWQQVIYKLIYDNEVLIVVSDSKE-----LLIADSFYREEYALYDDIFK 126 (395) T ss_pred C----C--ccccchHHHHHHhccCcCCCHHHHHHHHHHHHhhCCceEEEEecCCC-----eEecCCccceeEeecCccee Confidence 1 1 123444 34455689998775 7888999999999999987766532 455554444432222 222 Q ss_pred -EEEeCCceEEEEcCccEEEecCCCCcCCccccchhhHHHHHHHHHHHHHHHHHHHHhccCCCceeEEeCCCCccHHHHH Q lcl|Aclame:pro 157 -FFVQNWQQPYTFAAGSVFHLQEPDINQEVYGLPEYLSALNATWLNESATLFRRRYYKNGSHAGFILYMTDAAQKQEDVD 235 (368) Q Consensus 157 -~~~~~~~~~~~~~~~dviH~r~~~~~~~~~G~spi~~a~~~i~~~~~a~~~~~~~f~ng~~p~gil~~~~~~l~~e~~~ 235 (368) +.+...+....++++||||+|.+++.+..||+||+..++.++..+.+ .|++|+.++|+|.+++..+++++++ T Consensus 127 ~~~~~~~~~~~~~~~~evih~~~~~~~~~~~G~spi~~~~~~~~~~~~-------~~~~~~~~~gii~~~~~~~~~e~~~ 199 (395) T protein:vir:10 127 DVTVKDYTYQRTFTMQEVIYLKYNNNKVTHFVESLFEDYGKIFGRMIG-------AQLKNYQIRGILKSASSAYDEKNIE 199 (395) T ss_pred EEEEcCceeeeeeccccEEEEccCCCCcccccchHHHHHHHHHHHHHH-------HHHhcCCCceEEEeCCCCCCHHHHH Confidence 23334445678999999999988888888999999999988876553 4677888999999888788999999 Q ss_pred HHHHHHHHhccccccccccccccCccccccccccccchhhHH-----HHHHHHHHHHHHHHHHhCCChHHhccccccccc Q lcl|Aclame:pro 236 TLREAMKSAKGPGNFRNLFMYAPNGKKDGIQLLPVSEVAAKD-----EFWNIKNVTRDDQLAAHRVPPQLMGIIPNNTGG 310 (368) Q Consensus 236 ~~k~~~~~~~g~~n~~~~~~l~~~g~~~g~~~~pl~~~~~d~-----qf~e~~~~~~~~Ia~~fgVPp~~lg~~~~~~~~ 310 (368) ++++.|++.+++.|+++..++.. ++|++|+++++++.++ ||+|++++++++||++|||||++|| ++ T Consensus 200 ~~~~~~~~~~~~~~~~~~~v~~l---~~g~~~~~l~~~~~~~~~~~~q~~e~~~~~~~~Ia~~f~VPp~~l~------~~ 270 (395) T protein:vir:10 200 KLQAFTNKLFNTFNKNQLAIAPL---IEGFDYEELSNGGKNSNMPFSELSELMRDAIKNVALMIGIPPGLIY------GE 270 (395) T ss_pred HHHHHHHHHhccccccCcceEEc---CCCceeeeccccccccchhHHHHHHHHHHHHHHHHHHhCCCHHHhc------Cc Confidence 99999999888777776655421 4678999999988765 9999999999999999999999996 47 Q ss_pred ccCHHHHHHHHHHHHHHHHHHHHH-HHHhhcCcc-----eEeechhhhhcCChhhhhhhhhhcC Q lcl|Aclame:pro 311 FGDVEKAAMVFARNEVKPLQDRLL-AINDWIGDE-----VVRFAPYALGGHDQPAAAPGGQRSA 368 (368) Q Consensus 311 ~sn~e~~~~~f~~~tl~P~~~~ie-~l~~~l~~~-----~~~F~~~~Llr~D~~~ra~~~~~~~ 368 (368) ++|+|++.+.|+++||.|++..|| ++|++|.+. .++||.+.|+++|.+++++..++.- T Consensus 271 ~sn~e~~~~~~~~~~l~P~~~~ie~~l~~kL~~~~~~~~~~~f~~~~l~~~D~~~~~~~~~~~~ 334 (395) T protein:vir:10 271 TADLEKNTLVFEKFCLTPLLKKIQNELNAKLITQSMYLKDTRIEIVGVNKKDPLQYAEAIDKLV 334 (395) T ss_pred ccCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcChhhhcccceecchhhhccCHHHHHHHHHHHH Confidence 899999999999999999999998 599887542 3789999999999999999776444 No 95 >protein:vir:9507 Length: 395 # NCBI annotation: hypothetical protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:170 # MgeName: phiN315 # Cross-refs: genbank:acc:NP_835554;genbank:gi:30043953;genbank:GeneID:1260535 Probab=100.00 E-value=8.1e-52 Score=300.69 Aligned_cols=318 Identities=13% Similarity=0.075 Sum_probs=228.7 Q ss_pred CCcCCCCccccccccccccccCCCcchhhccccCceEEEECCCceeccChHHHHHHHHHHhccchhcccccHHHHHHHHH Q lcl|Aclame:pro 1 MSRNKTRRAARAASAHVRTANTDAPTEHHTDRAAQAEVFSFGDPVEVLDRRELLDYVECMRMGQWYEPPMPWDGLARSFR 80 (368) Q Consensus 1 m~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~r 80 (368) |+--+.-.+++... ... .+ ..++..-.....+...+++.|+..+. +.++..|+.+. + T Consensus 1 Mg~f~~lf~~~~~~--~~~----------~~----~~~~~~v~~~~~~~~~~v~~~i~~Ia-~~iA~~p~~~~------~ 57 (395) T protein:vir:95 1 MSILEKIFKTRKDI--TYM----------LD----LDMIEDLSQQAYVKRLAIDSCIEFVA-RAVAQSHFKVL------E 57 (395) T ss_pred CchhhhhhccCccc--ccc----------cc----chhccccchhhhhhhHHHHHHHHHHH-HhhccceeEec------c Confidence 88654332221110 000 00 11111011222345566666666544 56777787542 2 Q ss_pred hcccccchhhhccc-hHHhhccCCCCcCH-HHHHHHHHhHhhhCCeeEEEEecCCcceEEEEEecccccccccCC-Cee- Q lcl|Aclame:pro 81 AAAHHSSAVYVKRN-ILVSTFIPHPLLSR-ATFERLVLDWQVFGNAYLERRENVLGGTIRLDTPLAKYVRRGLDL-NTY- 156 (368) Q Consensus 81 ~~~~~~~~~~~~~~-~~l~~~~~n~~~~~-~~~~~~~~~~ll~Gnay~~i~r~~~G~~~~L~~l~p~~v~~~~~~-~~~- 156 (368) . + ...+|+ ..++...|||+++. +||+.++.++++.|++|+++.+++. ++++++..++..... +.+ T Consensus 58 ~----~--~~~~~~~~~ll~~~PN~~~t~~~f~~~~~~~lll~g~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~ 126 (395) T protein:vir:95 58 G----N--RIQKNDVYYKLNIKPNTDLSSDSFWQQVIYKLIYDNEVLIVVSDSKE-----LLIADSFYREEYALYDDIFK 126 (395) T ss_pred C----C--ccccchHHHHHHhccCcCCCHHHHHHHHHHHHhhCCceEEEEecCCC-----eEecCCccceeEeecCccee Confidence 1 1 123444 34455689998775 7888999999999999987766532 455554444432222 222 Q ss_pred -EEEeCCceEEEEcCccEEEecCCCCcCCccccchhhHHHHHHHHHHHHHHHHHHHHhccCCCceeEEeCCCCccHHHHH Q lcl|Aclame:pro 157 -FFVQNWQQPYTFAAGSVFHLQEPDINQEVYGLPEYLSALNATWLNESATLFRRRYYKNGSHAGFILYMTDAAQKQEDVD 235 (368) Q Consensus 157 -~~~~~~~~~~~~~~~dviH~r~~~~~~~~~G~spi~~a~~~i~~~~~a~~~~~~~f~ng~~p~gil~~~~~~l~~e~~~ 235 (368) +.+...+....++++||||+|.+++.+..||+||+..++.++..+.+ .|++|+.++|+|.+++..+++++++ T Consensus 127 ~~~~~~~~~~~~~~~~evih~~~~~~~~~~~G~spi~~~~~~~~~~~~-------~~~~~~~~~gii~~~~~~~~~e~~~ 199 (395) T protein:vir:95 127 DVTVKDYTYQRTFTMQEVIYLKYNNNKVTHFVESLFEDYGKIFGRMIG-------AQLKNYQIRGILKSASSAYDEKNIE 199 (395) T ss_pred EEEEcCceeeeeeccccEEEEccCCCCcccccchHHHHHHHHHHHHHH-------HHHhcCCCceEEEeCCCCCCHHHHH Confidence 23334445678999999999988888888999999999988876553 4677888999999888788999999 Q ss_pred HHHHHHHHhccccccccccccccCccccccccccccchhhHH-----HHHHHHHHHHHHHHHHhCCChHHhccccccccc Q lcl|Aclame:pro 236 TLREAMKSAKGPGNFRNLFMYAPNGKKDGIQLLPVSEVAAKD-----EFWNIKNVTRDDQLAAHRVPPQLMGIIPNNTGG 310 (368) Q Consensus 236 ~~k~~~~~~~g~~n~~~~~~l~~~g~~~g~~~~pl~~~~~d~-----qf~e~~~~~~~~Ia~~fgVPp~~lg~~~~~~~~ 310 (368) ++++.|++.+++.|+++..++.. ++|++|+++++++.++ ||+|++++++++||++|||||++|| ++ T Consensus 200 ~~~~~~~~~~~~~~~~~~~v~~l---~~g~~~~~l~~~~~~~~~~~~q~~e~~~~~~~~Ia~~f~VPp~~l~------~~ 270 (395) T protein:vir:95 200 KLQAFTNKLFNTFNKNQLAIAPL---IEGFDYEELSNGGKNSNMPFSELSELMRDAIKNVALMIGIPPGLIY------GE 270 (395) T ss_pred HHHHHHHHHhccccccCcceEEc---CCCceeeeccccccccchhHHHHHHHHHHHHHHHHHHhCCCHHHhc------Cc Confidence 99999999888777776655421 4678999999988765 9999999999999999999999996 47 Q ss_pred ccCHHHHHHHHHHHHHHHHHHHHH-HHHhhcCcc-----eEeechhhhhcCChhhhhhhhhhcC Q lcl|Aclame:pro 311 FGDVEKAAMVFARNEVKPLQDRLL-AINDWIGDE-----VVRFAPYALGGHDQPAAAPGGQRSA 368 (368) Q Consensus 311 ~sn~e~~~~~f~~~tl~P~~~~ie-~l~~~l~~~-----~~~F~~~~Llr~D~~~ra~~~~~~~ 368 (368) ++|+|++.+.|+++||.|++..|| ++|++|.+. .++||.+.|+++|.+++++..++.- T Consensus 271 ~sn~e~~~~~~~~~~l~P~~~~ie~~l~~kL~~~~~~~~~~~f~~~~l~~~D~~~~~~~~~~~~ 334 (395) T protein:vir:95 271 TADLEKNTLVFEKFCLTPLLKKIQNELNAKLITQSMYLKDTRIEIVGVNKKDPLQYAEAIDKLV 334 (395) T ss_pred ccCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcChhhhcccceecchhhhccCHHHHHHHHHHHH Confidence 899999999999999999999998 599887542 3789999999999999999776444 No 96 >protein:vir:78310 Length: 376 # NCBI annotation: gp3 # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:1850 # MgeName: B025 # Cross-refs: genbank:acc:YP_001468642;genbank:gi:157325220;genbank:GeneID:5601655 Probab=100.00 E-value=9.7e-50 Score=289.30 Aligned_cols=320 Identities=10% Similarity=0.023 Sum_probs=217.4 Q ss_pred CCcCCCCccccccccccccccCCCcchhhccccCceEEEECCCceeccChHHHHHHHHHHhccchhcccccHHHHHHHHH Q lcl|Aclame:pro 1 MSRNKTRRAARAASAHVRTANTDAPTEHHTDRAAQAEVFSFGDPVEVLDRRELLDYVECMRMGQWYEPPMPWDGLARSFR 80 (368) Q Consensus 1 m~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~r 80 (368) |+--..-.+++ + .... ......+.....+..+...++..|+..+. .+++..|+.++ + T Consensus 1 Mg~f~~l~~~~-~------~~~~---------~~~~~~~~~~~~~~~l~~~~v~~~i~~Ia-~~ia~~p~~~~------~ 57 (376) T protein:vir:78 1 MGFFSELFKRN-K------EIEW---------MWDLDFLEDKTTKVYLKKMALNTCVKHIA-RTIAKSDFRLK------N 57 (376) T ss_pred CchhhhhhccC-C------cccc---------ccchhhccccchhhhhhhHHHHHHHHHHH-Hhhcccceeec------c Confidence 87543211110 0 0000 00112222222344566677777766554 56788887542 1 Q ss_pred hcccccchhhhccc-hHHhhccCCCCcCH-HHHHHHHHhHhhhCCeeEEEEecCCcceEEEEEecccccccccCCCeeEE Q lcl|Aclame:pro 81 AAAHHSSAVYVKRN-ILVSTFIPHPLLSR-ATFERLVLDWQVFGNAYLERRENVLGGTIRLDTPLAKYVRRGLDLNTYFF 158 (368) Q Consensus 81 ~~~~~~~~~~~~~~-~~l~~~~~n~~~~~-~~~~~~~~~~ll~Gnay~~i~r~~~G~~~~L~~l~p~~v~~~~~~~~~~~ 158 (368) . ....+|+ ..++..+|||+++. +||+.++.++++.||+|+++.|++.|.+.+++|+.+..+...... .+. T Consensus 58 ~------~~~~~~~l~~ll~~~PN~~~t~~~f~~~~~~~lll~Gn~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~--~~~ 129 (376) T protein:vir:78 58 G------ETSVRDKLYYKLNIRPNTDMSSSSFWEKVIYKLIYDNECLIVLSDTDDFLIADSYVRKEFAFFPDVFE--GVT 129 (376) T ss_pred c------cccccchHHHHHhhccccCCCHHHHHHHHHHHHhHcCcEEEEEEeCCCeeeccceeecccceeeeeee--eee Confidence 1 1223455 33555689998875 788899999999999999999999999999999988766433211 111 Q ss_pred EeCCceEEEEcCccEEEecCCCCcCCccccchhhHHHHHHHHHHHHHHHHHHHHhccCCCceeEEeCCCCccHHHHHHHH Q lcl|Aclame:pro 159 VQNWQQPYTFAAGSVFHLQEPDINQEVYGLPEYLSALNATWLNESATLFRRRYYKNGSHAGFILYMTDAAQKQEDVDTLR 238 (368) Q Consensus 159 ~~~~~~~~~~~~~dviH~r~~~~~~~~~G~spi~~a~~~i~~~~~a~~~~~~~f~ng~~p~gil~~~~~~l~~e~~~~~k 238 (368) ....+....|+++||||+|........++.+++..+...+... ....++.||.++.+++.. ...+++++.++++ T Consensus 130 ~~~~~~~~~~~~~evih~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~-~~~~~~e~~~~~~ 203 (376) T protein:vir:78 130 VKDYRYNRNFSMDDVIFLEYGNERLSAFTDGMFEDYGELFGKM-----IRAQMRNFQIRGAVNFKM-AGVADKDKQTKLQ 203 (376) T ss_pred eecceeeeeeccccEEEeccCCCCchhhhhHHHHHHHHHHHHH-----HHHHHhcCCCceeEEEcc-CCCCCHHHHHHHH Confidence 2222335679999999999654322222333333333222211 123344555555555554 4578999999999 Q ss_pred HHHHHhccc-cc-cccccccccCccccccccccccchhhH-----HHHHHHHHHHHHHHHHHhCCChHHhcccccccccc Q lcl|Aclame:pro 239 EAMKSAKGP-GN-FRNLFMYAPNGKKDGIQLLPVSEVAAK-----DEFWNIKNVTRDDQLAAHRVPPQLMGIIPNNTGGF 311 (368) Q Consensus 239 ~~~~~~~g~-~n-~~~~~~l~~~g~~~g~~~~pl~~~~~d-----~qf~e~~~~~~~~Ia~~fgVPp~~lg~~~~~~~~~ 311 (368) +.|++.+++ .+ .+.++++ +.|++|+|+++++.| +||+|++++++++||++|||||++|| +++ T Consensus 204 ~~~~~~~~g~~~~~~~v~~l-----~~g~~~~~l~~~~~~~~~~~~q~~e~~~~~~~~Ia~~fgVPp~~l~------~~~ 272 (376) T protein:vir:78 204 EYIDKVYASFNNNEIAIVPQ-----LEGFNYEEFGTTSVNNSQSFDEVKKLRKEMIDYVASILGIPSSLLH------GDM 272 (376) T ss_pred HHHHHHhccccccCcceEEc-----CCCceEEeeccCccccchhHHHHHHHHHHHHHHHHHHhCCCHHHhC------CCC Confidence 999887654 33 4444445 578999999988865 59999999999999999999999996 468 Q ss_pred cCHHHHHHHHHHHHHHHHHHHHH-HHHhhcCcc---eEeechhhhhcCChhhhhhhhhhcC Q lcl|Aclame:pro 312 GDVEKAAMVFARNEVKPLQDRLL-AINDWIGDE---VVRFAPYALGGHDQPAAAPGGQRSA 368 (368) Q Consensus 312 sn~e~~~~~f~~~tl~P~~~~ie-~l~~~l~~~---~~~F~~~~Llr~D~~~ra~~~~~~~ 368 (368) +|+|++.+.|+++||.||++.|| ++|++|.+. +++|+.+.++|+|.+++++..++.- T Consensus 273 s~~e~~~~~f~~~~l~P~~~~ie~~l~~kll~~~~~~~~~~~~~ll~~d~~~~~~~~~~~~ 333 (376) T protein:vir:78 273 ADLSNNMKAYMEYCIDPLTKKLEDELNAKLFTFSEFLAGEHIKIIHKKDIIENAEAVDKLV 333 (376) T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCcccceecccchhhcccCHHHHHHHHHHHH Confidence 99999999999999999999999 599877432 5789999999999999999877555 No 97 >protein:vir:9641 Length: 395 # NCBI annotation: portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:173 # MgeName: 315.1 # Cross-refs: genbank:acc:NP_795403;genbank:gi:28876176;genbank:GeneID:1257709 Probab=100.00 E-value=1.1e-47 Score=278.13 Aligned_cols=322 Identities=10% Similarity=-0.037 Sum_probs=214.3 Q ss_pred CCcCCCCccccccccccccccCCCcchhhccccCceEEEECCCceeccChHHHHHHHHHHhccchhcccccHHHHHHHHH Q lcl|Aclame:pro 1 MSRNKTRRAARAASAHVRTANTDAPTEHHTDRAAQAEVFSFGDPVEVLDRRELLDYVECMRMGQWYEPPMPWDGLARSFR 80 (368) Q Consensus 1 m~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~r 80 (368) |+--...+.++.. ..+.. ...+.++--.+...+...+++.|+.++. ++++..|+.+. + T Consensus 1 Mgl~d~~~~~~~~-----~~~~~----------~~~~~~~~~~~~~~l~~~~v~~~i~~Ia-~~ia~lp~~v~------~ 58 (395) T protein:vir:96 1 MGILDFFSFKKSG-----TLSDD----------DSGSTTSEKLTNVVLKEDALYKCVNYLA-RIISKSTFRIK------A 58 (395) T ss_pred CcchhhhcCCCCc-----ccccc----------ccccchhhhcchhhhhhHHHHHHHHHHH-HhhccceeEEE------e Confidence 6643211111000 00000 0111121111334466677777777665 66788887543 2 Q ss_pred hcccccchhhhccch-HHhhccCCCCcCH-HHHHHHHHhHhhhCCeeEEEEecCCcceEEEEEecccccccccCCCeeEE Q lcl|Aclame:pro 81 AAAHHSSAVYVKRNI-LVSTFIPHPLLSR-ATFERLVLDWQVFGNAYLERRENVLGGTIRLDTPLAKYVRRGLDLNTYFF 158 (368) Q Consensus 81 ~~~~~~~~~~~~~~~-~l~~~~~n~~~~~-~~~~~~~~~~ll~Gnay~~i~r~~~G~~~~L~~l~p~~v~~~~~~~~~~~ 158 (368) . +.....+|+. .++...|||+++. +||+.++.++++.||||+++.|+..+.+ .+...+.....+..|+. T Consensus 59 ~----~~~~~~~~~~~~lL~~~PN~~~t~~~f~~~l~~~lll~Gna~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~ 129 (395) T protein:vir:96 59 P----EKLTENQKDWLYWINTKANPNQSASQFWVEVVQKLLVDGETLIFVIPGKGIYV-----ADAFTQDKKLSGNKFKV 129 (395) T ss_pred C----CccccccchHHHHHhhcCCCCCCHHHHHHHHHHHHhhcCceEEEEEcCCceec-----CCccccccccccceeee Confidence 1 1222334553 4666789998774 7899999999999999999999764322 22222222222334444 Q ss_pred EeCCc--eEEEEcCccEEEecCCCCcCCccccchhhHHHHHHHHHH------HHHHHHHHHHhccCCCceeEEeCCCCcc Q lcl|Aclame:pro 159 VQNWQ--QPYTFAAGSVFHLQEPDINQEVYGLPEYLSALNATWLNE------SATLFRRRYYKNGSHAGFILYMTDAAQK 230 (368) Q Consensus 159 ~~~~~--~~~~~~~~dviH~r~~~~~~~~~G~spi~~a~~~i~~~~------~a~~~~~~~f~ng~~p~gil~~~~~~l~ 230 (368) +..++ ....++++||||||...+....++.+++......+.... .+.++..++|+||+.|++++..++. .. T Consensus 130 v~~~~~~~~~~~~~~dvih~k~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 208 (395) T protein:vir:96 130 SRVQGQTYEKIFTFDQVIYLKNDNSDLMLKVESLWEEYGELLGHVINNQKIANQIRFTMTPPKDKVRERAQENSDGG-RQ 208 (395) T ss_pred eeeccceeeeEeccCceEEecccCCccccccccccchHHHHHHHHHHHHHHHHHHHHHhhhcccccccceeeccCch-hh Confidence 33222 356799999999997765545555555555444444433 3447888999999999999987643 23 Q ss_pred HHHHHHHHHHHHHhccccc--cccccccccCccccccccccccchhhHHHHHHHHHHH------HHHHHHHhCCChHHhc Q lcl|Aclame:pro 231 QEDVDTLREAMKSAKGPGN--FRNLFMYAPNGKKDGIQLLPVSEVAAKDEFWNIKNVT------RDDQLAAHRVPPQLMG 302 (368) Q Consensus 231 ~e~~~~~k~~~~~~~g~~n--~~~~~~l~~~g~~~g~~~~pl~~~~~d~qf~e~~~~~------~~~Ia~~fgVPp~~lg 302 (368) + +..++.|++.++..+ .+.++++ +.|++|+++++++.|+||+|.++++ +++||++|||||++|| T Consensus 209 ~---~~~~~~~~~~~~~~~~~~~~v~~l-----~~g~~~~~l~~~~~d~q~~e~~~~~~~~~~~~~eIa~~fgVPp~~l~ 280 (395) T protein:vir:96 209 P---KSDKDFFKRTIEKIRTESVVGIPV-----TANTNYEEYGSKNTGSVKSYVDDIKKLKDQYMAEFAEMLGIPISLLH 280 (395) T ss_pred H---HHHHHHHHHHHHHhhcCCcceEEc-----cCCceeEecccChhhhhhhhHHHHHHHHHHHHHHHHHHhCCCHHHhc Confidence 3 344555555554433 3334445 6789999999999999999998876 5899999999999996 Q ss_pred ccccccccccCHHHHHHHHHHHHHHHHHHHHH-HHHhhcCcc-----eEeechhhhhcCChhhhhhhhhhcC Q lcl|Aclame:pro 303 IIPNNTGGFGDVEKAAMVFARNEVKPLQDRLL-AINDWIGDE-----VVRFAPYALGGHDQPAAAPGGQRSA 368 (368) Q Consensus 303 ~~~~~~~~~sn~e~~~~~f~~~tl~P~~~~ie-~l~~~l~~~-----~~~F~~~~Llr~D~~~ra~~~~~~~ 368 (368) ++++|+|++.+.|+++||.||++.|| +++++|.++ .++|+.+.|+++|.++|++.++..- T Consensus 281 ------~~~sn~e~~~~~f~~~~L~P~~~~ie~~l~~~Ll~~~e~~~~~~f~~~~l~~~d~~~~~~~~~~~~ 346 (395) T protein:vir:96 281 ------GDIADNQKNYELLLEGPIESLITNIVDGLEYAIFDKSETLEGSFIKVTGLKNYDLFSISSQADKLI 346 (395) T ss_pred ------CCCccHHHHHHHHHHHHHHHHHHHHHHHHHhhcCChhhhcCceeEeecchhccCHHHHHHHHHHHH Confidence 47899999999999999999999999 599877542 3679999999999999999876654 No 98 >protein:vir:4089 Length: 395 # NCBI annotation: hypothetical protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:86 # MgeName: 2389 # Cross-refs: genbank:acc:NP_510984;swissprot:trembl:q8w606;genbank:gi:17488506;uniprot:Q8W606;genbank:GeneID:1260314 Probab=100.00 E-value=1.4e-47 Score=277.38 Aligned_cols=322 Identities=12% Similarity=0.017 Sum_probs=213.0 Q ss_pred CCcCCCCccccccccccccccCCCcchhhccccCceEEEECCCceeccChHHHHHHHHHHhccchhcccccHHHHHHHHH Q lcl|Aclame:pro 1 MSRNKTRRAARAASAHVRTANTDAPTEHHTDRAAQAEVFSFGDPVEVLDRRELLDYVECMRMGQWYEPPMPWDGLARSFR 80 (368) Q Consensus 1 m~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~r 80 (368) |.-.+ +......+.. +.... . +... ...+.....+..+...+++.|+.++. ++++..|+.+. + T Consensus 1 Mg~~~-~~~~~~~~~~-~~~~~---~-~~~~----~~~~~~~~~~~~l~~~~v~~~v~~Ia-~~ia~~p~~~~------~ 63 (395) T protein:vir:40 1 MGFKS-WVSGFFNEEQ-RTLNL---T-DTVW----CSIPSEKLKELSIKKWAIDSCANKIA-NTLSCAEVLTY------E 63 (395) T ss_pred CchHH-HHHhhhcccc-ccccc---c-cchh----hccccccchhhhhhhHHHHHHHHHHH-HHHhhCceeec------c Confidence 76422 1111111111 01000 0 0000 01111112344566777878877765 56888887532 2 Q ss_pred hcccccchhhhccc-hHHhhccCCCCcCH-HHHHHHHHhHhhhCCeeEEEEecCCcceEEEEEeccccccc-ccCCCeeE Q lcl|Aclame:pro 81 AAAHHSSAVYVKRN-ILVSTFIPHPLLSR-ATFERLVLDWQVFGNAYLERRENVLGGTIRLDTPLAKYVRR-GLDLNTYF 157 (368) Q Consensus 81 ~~~~~~~~~~~~~~-~~l~~~~~n~~~~~-~~~~~~~~~~ll~Gnay~~i~r~~~G~~~~L~~l~p~~v~~-~~~~~~~~ 157 (368) . +.. .+++ ..++...|||+++. +||+.++.+++++||||+++.++.. ++.+...+.. ......|+ T Consensus 64 ~----~~~--~~~~~~~lL~~~PN~~~t~~~f~~~~~~~lll~Gnay~~~~~~~~------~~~~~~~~~~~~~~~~~~~ 131 (395) T protein:vir:40 64 K----GEE--VRKKNWYMFNVEANQNQNATEFWKKAIYKLVYDNEALIFMQDEYI------YVADSFTKNDKSLYENTYT 131 (395) T ss_pred C----Ccc--ccchHHHHHHhcCCCCCCHHHHHHHHHHHHhhcCceEEEEecCce------eecCCccccccccccceee Confidence 1 111 2233 45677789998875 7888899999999999999987642 2222222211 11122343 Q ss_pred EEeCCc--eEEEEcCccEEEecCCCCcCCccccchhhHHHHHHHHHHHHHHHHHHHHhccCCCceeEEeCCCCccHHHHH Q lcl|Aclame:pro 158 FVQNWQ--QPYTFAAGSVFHLQEPDINQEVYGLPEYLSALNATWLNESATLFRRRYYKNGSHAGFILYMTDAAQKQEDVD 235 (368) Q Consensus 158 ~~~~~~--~~~~~~~~dviH~r~~~~~~~~~G~spi~~a~~~i~~~~~a~~~~~~~f~ng~~p~gil~~~~~~l~~e~~~ 235 (368) .+..++ -...|+++||||||........++.+.+......+... .....+.|+.++.+++..+ ..+++++.+ T Consensus 132 ~v~~~~~~~~~~~~~~evih~r~~~~~~~~~~~~l~~~~~~~~~~~-----~~~~~~~~~~~~~l~~~~~-~~~~~~~~~ 205 (395) T protein:vir:40 132 EVTLKDLTLKKEFKESEVLHLTLNNESIKSIIDGFYLLYGDLLTAA-----VNKYKKLNSRKIIVKLKAM-FGQTPEAEE 205 (395) T ss_pred eeeecCceeeeeeccccEEEeecCCCCccccchhHHHHHHHHHHHH-----HHHHHhcCCCCceEEEecc-cCCCHHHHH Confidence 333333 24578999999999544322223333334444333332 2334456666666666654 468999999 Q ss_pred HHHHHHHHhccc--cccccccccccCccccccccccccchhhHHHHHHHHHHHH---HHHHHHhCCChHHhccccccccc Q lcl|Aclame:pro 236 TLREAMKSAKGP--GNFRNLFMYAPNGKKDGIQLLPVSEVAAKDEFWNIKNVTR---DDQLAAHRVPPQLMGIIPNNTGG 310 (368) Q Consensus 236 ~~k~~~~~~~g~--~n~~~~~~l~~~g~~~g~~~~pl~~~~~d~qf~e~~~~~~---~~Ia~~fgVPp~~lg~~~~~~~~ 310 (368) ++++.|++.+++ .|+++++++ ++|++|+|++++++|+||+|+++++. ++||++|||||++|| ++ T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~vl-----~~g~~~~~l~~~~~d~q~~e~~~~~~~~~~~Ia~~fgVPp~~l~------~~ 274 (395) T protein:vir:40 206 KLRLMLSERMKKFLAEGDSALPV-----EDGMEIDELAGDSKIAESRDIKKMIDDVFEMVANSFNIPLGLAK------GD 274 (395) T ss_pred HHHHHHHHHHHHhhccCCceeec-----CCCceEEeccCChhhhhHHHHHHHHHHHHHHHHHHhCCCHHHhc------CC Confidence 999999886543 578888877 67899999999999999999999985 799999999999996 46 Q ss_pred ccCHHHHHHHHHHHHHHHHHHHHH-HHHhhcCc-------ceEeechhhhhcCChhhhhhhhhhcC Q lcl|Aclame:pro 311 FGDVEKAAMVFARNEVKPLQDRLL-AINDWIGD-------EVVRFAPYALGGHDQPAAAPGGQRSA 368 (368) Q Consensus 311 ~sn~e~~~~~f~~~tl~P~~~~ie-~l~~~l~~-------~~~~F~~~~Llr~D~~~ra~~~~~~~ 368 (368) ++|+|++.+.|+++||.||+++|| ++|++|.+ .+++||.+.|+++|.+++++..++.- T Consensus 275 ~sn~e~~~~~f~~~~L~P~~~~ie~~l~~kLl~~~~~~~g~~i~fd~~~ll~~d~~~~~~~~~~~~ 340 (395) T protein:vir:40 275 TVGLSEQVNSFLMFSINPIAEMFTDEGNRKFYGRDSVLERTYMKLDTTRIKVQDIQEIASSMDVLF 340 (395) T ss_pred CcCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhhhcCCceEEEechhhhccCHHHHHHHHHHHH Confidence 889999999999999999999998 59987743 25899999999999999999877655 No 99 >protein:vir:98643 Length: 395 # NCBI annotation: putative portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:1601 # MgeName: phi3396 # Cross-refs: genbank:acc:YP_001039921;genbank:gi:126011096;genbank:GeneID:4818479 Probab=100.00 E-value=3e-47 Score=275.65 Aligned_cols=325 Identities=9% Similarity=-0.020 Sum_probs=220.3 Q ss_pred CCcCCCCccccccccccccccCCCcchhhccccCceEEEECCCceeccChHHHHHHHHHHhccchhcccccHHHHHHHHH Q lcl|Aclame:pro 1 MSRNKTRRAARAASAHVRTANTDAPTEHHTDRAAQAEVFSFGDPVEVLDRRELLDYVECMRMGQWYEPPMPWDGLARSFR 80 (368) Q Consensus 1 m~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~r 80 (368) |.--.....++ .. . .... .+.+.++.-..+..+...+++.|+.++. .+++..|+.+. + T Consensus 1 MGlf~~~~~~~-~~---~-~~~~----------~~~~~~~~~~~~~~~~~~~v~~~I~~ia-~~iA~lp~~~~------~ 58 (395) T protein:vir:98 1 MGILDFFSFKK-SG---T-LSDD----------DSGSTTSEKLTNVVLKEDALYKCVNYLA-RIISKSTFRLK------T 58 (395) T ss_pred CcchhhhcCCC-cc---c-cccc----------ccchhhhhhcchhhhhhHHHHHHHHHHH-HHHhhCceeEE------e Confidence 54322111110 00 0 0000 0011111111234456677777776654 56888887532 2 Q ss_pred hcccccchhhhccc-hHHhhccCCCCcCH-HHHHHHHHhHhhhCCeeEEEEecCCcceEEEEEeccccccc-ccCCCeeE Q lcl|Aclame:pro 81 AAAHHSSAVYVKRN-ILVSTFIPHPLLSR-ATFERLVLDWQVFGNAYLERRENVLGGTIRLDTPLAKYVRR-GLDLNTYF 157 (368) Q Consensus 81 ~~~~~~~~~~~~~~-~~l~~~~~n~~~~~-~~~~~~~~~~ll~Gnay~~i~r~~~G~~~~L~~l~p~~v~~-~~~~~~~~ 157 (368) .. .+ ...+|+ ..++...|||+++. +||+.++.+++++||||+++.++..+. + ++..+.. ......++ T Consensus 59 ~~--~~--~~~~~~~~~lL~~~PN~~~t~~~f~~~~~~~lll~Gnayi~~~~~~~~~-----~-~~~~~~~~~~~~~~~~ 128 (395) T protein:vir:98 59 PE--KL--TENQKDWLYWINTKANPNQSASQFWVEVIQKLLVDGETLIFVIPGKGIY-----V-ADSFTQDKKISGSQFK 128 (395) T ss_pred cC--Cc--ccccchHHHHHhhcCCCCCCHHHHHHHHHHHHhhcCceEEEEEeCCcee-----c-CCcccccccccCcccc Confidence 11 11 122444 45666799998775 788899999999999999999976432 2 2222222 22233333 Q ss_pred EEeCC--ceEEEEcCccEEEecCCCCcCCccccchhhHHHHHHHHHHHH--HHHHHHHHhccCCCceeEEeCCCCccHHH Q lcl|Aclame:pro 158 FVQNW--QQPYTFAAGSVFHLQEPDINQEVYGLPEYLSALNATWLNESA--TLFRRRYYKNGSHAGFILYMTDAAQKQED 233 (368) Q Consensus 158 ~~~~~--~~~~~~~~~dviH~r~~~~~~~~~G~spi~~a~~~i~~~~~a--~~~~~~~f~ng~~p~gil~~~~~~l~~e~ 233 (368) .+..+ +-..++.++||||+|..++....++.+++......+....+. ..+..+++.++..+++++..+....++++ T Consensus 129 ~~~~~~~~~~~~~~~~evih~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (395) T protein:vir:98 129 VSRVQGQTYEKTFTFDQVIYLKNDNSDLMSKVESLWEEYGELLGHVINNQKIANQIRFTMIPPKDKVRERAQENSDGGRQ 208 (395) T ss_pred eeeecCceeeeEecCccEEEecCCCCCccccccchhhhHHHHHHHHHHHHHHHHHHHHhhccccccccccccccCCcHHH Confidence 33322 224688999999999876544455666666666666544443 44567799999999999877666667788 Q ss_pred HHHHHHHHHHhccccc--cccccccccCccccccccccccc------hhhHHHHHHHHHHHHHHHHHHhCCChHHhcccc Q lcl|Aclame:pro 234 VDTLREAMKSAKGPGN--FRNLFMYAPNGKKDGIQLLPVSE------VAAKDEFWNIKNVTRDDQLAAHRVPPQLMGIIP 305 (368) Q Consensus 234 ~~~~k~~~~~~~g~~n--~~~~~~l~~~g~~~g~~~~pl~~------~~~d~qf~e~~~~~~~~Ia~~fgVPp~~lg~~~ 305 (368) .+..++.|++..++.+ .+.++++ +.|++|+|+++ +++|+||+|++++++++||++|||||++|| T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~v~~l-----~~g~~~~~l~~~~~~~~~~~~~q~~e~~~~~~~~Ia~~fgVP~~~l~--- 280 (395) T protein:vir:98 209 SKSDKDFFKRTVEKIRTESVVGIPV-----TANTNYEEYGSKNTGAVKSYVDDIKKLKDQYMAEFAEMLGIPISLLH--- 280 (395) T ss_pred HHHHHHHHHHHHhhhhcCCcceeec-----CCCceeEecccccccccChhHHHHHHHHHHHHHHHHHHhCCCHHHhc--- Confidence 8888888888776543 3334444 57899999984 467889999999999999999999999996 Q ss_pred cccccccCHHHHHHHHHHHHHHHHHHHHH-HHHhhcCcc-----eEeechhhhhcCChhhhhhhhhhcC Q lcl|Aclame:pro 306 NNTGGFGDVEKAAMVFARNEVKPLQDRLL-AINDWIGDE-----VVRFAPYALGGHDQPAAAPGGQRSA 368 (368) Q Consensus 306 ~~~~~~sn~e~~~~~f~~~tl~P~~~~ie-~l~~~l~~~-----~~~F~~~~Llr~D~~~ra~~~~~~~ 368 (368) ++|+|+|++.+.|+++||.||+++|| +||++|.+. .++|+.+.|+++|.+++++.+++.- T Consensus 281 ---~~~sn~e~~~~~f~~~tl~P~~~~ie~~l~~kll~~~~~~~g~~f~~~~l~~~d~~~~~~~~~~~~ 346 (395) T protein:vir:98 281 ---GDIADNQKNYELLLEGPIESLITNIVDGLEYAIFDKSETLQGSFIKVTGLKNYDLFSISNQADKLI 346 (395) T ss_pred ---CCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhhhcCcceeeehhhhccCHHHHHHHHHHHH Confidence 57899999999999999999999999 599876542 3678999999999999999887654 No 100 >protein:vir:93867 Length: 378 # NCBI annotation: putative portal protein # Family: family:all:2379 # MgeID: mge:1479 # MgeName: 712 # Cross-refs: genbank:acc:YP_764264;genbank:gi:115315577;genbank:GeneID:5141561 Probab=100.00 E-value=1.3e-46 Score=272.16 Aligned_cols=298 Identities=8% Similarity=0.004 Sum_probs=206.3 Q ss_pred CCcCCCCccccccccccccccCCCcchhhccccCceEEEECCCceeccChHHHHHHHHHHhccchhcccccHHHHHHHHH Q lcl|Aclame:pro 1 MSRNKTRRAARAASAHVRTANTDAPTEHHTDRAAQAEVFSFGDPVEVLDRRELLDYVECMRMGQWYEPPMPWDGLARSFR 80 (368) Q Consensus 1 m~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~r 80 (368) |.-...-+.- ++.. .+.. .+...+| ......+...+++.|+..+. +.++..|+.+. .+ T Consensus 1 Mg~f~~~~~f--~~~~---~~~~---------~~~~~~~--~~~~~~~~~~~v~~~i~~Ia-~~iA~lp~~~~-----~~ 58 (378) T protein:vir:93 1 MNLFGKVVSF--SRGK---LNND---------TQRVTAW--QNEAVEYTSAFVTNIHNKIA-NEITKVEFNHV-----KY 58 (378) T ss_pred Cccchhhhhh--hccc---cCCC---------cceeeec--ccchhHHHHHHHHHHHHHHH-hhhhhCceeeE-----EE Confidence 8765332111 0000 0000 0111112 11112233444566666554 66888886431 12 Q ss_pred hcccc---cchhhhccch-HHhhccCCCCcCH-HHHHHHHHhHhhhCCeeEEEEecCC-cceEEEEEecccccccccCCC Q lcl|Aclame:pro 81 AAAHH---SSAVYVKRNI-LVSTFIPHPLLSR-ATFERLVLDWQVFGNAYLERRENVL-GGTIRLDTPLAKYVRRGLDLN 154 (368) Q Consensus 81 ~~~~~---~~~~~~~~~~-~l~~~~~n~~~~~-~~~~~~~~~~ll~Gnay~~i~r~~~-G~~~~L~~l~p~~v~~~~~~~ 154 (368) ..... ......+|+. .++...|||+++. +||+.++.+++++||+|++++|++. |+++.++|. T Consensus 59 ~~~~~~~~~~~~~~~~~l~~lL~~~PN~~~t~~~f~~~~~~~lll~Gn~~i~~~~~~~~g~~~~l~~~------------ 126 (378) T protein:vir:93 59 KKSDVGSDTLISMAGSDLDEVLNWSPKGERNSMDFWRKVIKKLLRAPYVDLYAVFDDNTGELLDLLFA------------ 126 (378) T ss_pred cccccccccccccccchHHHHHhhcCCCCCCHHHHHHHHHHHHhhcCceEEEEEeecCCceEEEEEec------------ Confidence 11111 1122345553 4555689998875 7888999999999999999887643 666666552 Q ss_pred eeEEEeCCceEEEEcCccEEEecCCCCcCCccccchhhHHHHHHHHHHHHHHHHHHHHhccCCCceeEEeCCCCccHHHH Q lcl|Aclame:pro 155 TYFFVQNWQQPYTFAAGSVFHLQEPDINQEVYGLPEYLSALNATWLNESATLFRRRYYKNGSHAGFILYMTDAAQKQEDV 234 (368) Q Consensus 155 ~~~~~~~~~~~~~~~~~dviH~r~~~~~~~~~G~spi~~a~~~i~~~~~a~~~~~~~f~ng~~p~gil~~~~~~l~~e~~ 234 (368) +...+|+++||||+|.+ .++..|.||+..+++++. .+|++| .|+|+|++++ .+++++. T Consensus 127 --------~~~~~~~~~diih~r~~--~~~~~~~s~l~~~~~~i~----------~~~~~~-~~~g~l~~~~-~l~~~~~ 184 (378) T protein:vir:93 127 --------DDKKEYKTEELVRLTSP--FYINEDTSILDNALASIQ----------TKLEQG-KLRGLLKINA-FLDIDNT 184 (378) T ss_pred --------CCeeEeccceeEEecCc--cccchhhHHHHHHHHHHH----------HHHhcC-cccceeeeCC-cCCHHHH Confidence 22356889999999964 467779999988877653 355665 5899999875 5777765 Q ss_pred HHHHHHH----HHhccccccccccccccCccccccccccccchhhHHHHHHHHHHHHHHHHHHhCCChHHhccccccccc Q lcl|Aclame:pro 235 DTLREAM----KSAKGPGNFRNLFMYAPNGKKDGIQLLPVSEVAAKDEFWNIKNVTRDDQLAAHRVPPQLMGIIPNNTGG 310 (368) Q Consensus 235 ~~~k~~~----~~~~g~~n~~~~~~l~~~g~~~g~~~~pl~~~~~d~qf~e~~~~~~~~Ia~~fgVPp~~lg~~~~~~~~ 310 (368) +++++.| ++..+++|+++++++ +.|++|+|++++++|+|+ +.+++++++||++|||||++|+ T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~l-----~~g~~~~~l~~~~~~~~~-~~~~~~~~~Ia~~fgVPp~~l~-------- 250 (378) T protein:vir:93 185 QEYREKALTTIKNMQEGSSYNGLTPV-----DNKTEIVELKKDYSVLNK-DEIDLIKSELLTGYFMNENILL-------- 250 (378) T ss_pred HHHHHHHHHHHHHhhcccccccceEc-----CCCceEEEccCChhhhhH-HHHHHHHHHHHHHhCCCHHHhc-------- Confidence 5555555 455677889999888 678999999999999997 6678999999999999999984 Q ss_pred ccCHHHHHHHHHHHHHHHHHHHHH-HHHhhcCcc-------------eEeechhhhhcCChhhhhhhhhhcC Q lcl|Aclame:pro 311 FGDVEKAAMVFARNEVKPLQDRLL-AINDWIGDE-------------VVRFAPYALGGHDQPAAAPGGQRSA 368 (368) Q Consensus 311 ~sn~e~~~~~f~~~tl~P~~~~ie-~l~~~l~~~-------------~~~F~~~~Llr~D~~~ra~~~~~~~ 368 (368) +++.|++...|+++||.||++.|| +||++|.+. .++||.+.|+++|.++|++.++..- T Consensus 251 g~~~e~~~~~f~~~tl~P~~~~ie~~l~~kLl~~~er~~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~ 322 (378) T protein:vir:93 251 GTATQEQQIYFYNSTIIPLLIQLEKELTYKLISTNRRRVVKGNLYYERIIVDNQLFKFATLKELIDLYHENI 322 (378) T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHHHhhcCChhHhhhhhhcccccceeeccchhhhcCHHHHHHHHHHHH Confidence 234589999999999999999999 599887532 2789999999999999999876655 No 101 >protein:vir:94002 Length: 378 # NCBI annotation: putative portal protein # Family: family:all:2379 # MgeID: mge:1487 # MgeName: jj50 # Cross-refs: genbank:acc:YP_764318;genbank:gi:115315632;genbank:GeneID:5176589 Probab=100.00 E-value=1.1e-45 Score=267.01 Aligned_cols=298 Identities=8% Similarity=0.026 Sum_probs=205.0 Q ss_pred CCcCCCCccccccccccccccCCCcchhhccccCceEEEECCCceeccChHHHHHHHHHHhccchhcccccHHHHHHHHH Q lcl|Aclame:pro 1 MSRNKTRRAARAASAHVRTANTDAPTEHHTDRAAQAEVFSFGDPVEVLDRRELLDYVECMRMGQWYEPPMPWDGLARSFR 80 (368) Q Consensus 1 m~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~r 80 (368) |--...-+.- ++ ...+.. .....++. +... .....++..|+.++. ++++..|+.+ +.+ T Consensus 1 Mg~f~~~~~~--~~---~~~~~~---------~~~~~~~~-~~~~-~~~~~~v~~~v~~IA-~~iA~lp~~~-----~~~ 58 (378) T protein:vir:94 1 MNLFGKVVSF--SR---GKLNND---------TQRVTAWQ-NEAV-EYTSAFVTNIHNKIA-NEITKVEFNH-----VKY 58 (378) T ss_pred CCccccchhc--cc---ccccCC---------cceeeeec-cchh-HHHHHHHHHHHHHHH-hhhhhCceee-----EEE Confidence 5433111000 00 000000 00111111 1111 122334556666554 6688888642 112 Q ss_pred hcccc---cchhhhccchH-HhhccCCCCcCH-HHHHHHHHhHhhhCCeeEEEEec-CCcceEEEEEecccccccccCCC Q lcl|Aclame:pro 81 AAAHH---SSAVYVKRNIL-VSTFIPHPLLSR-ATFERLVLDWQVFGNAYLERREN-VLGGTIRLDTPLAKYVRRGLDLN 154 (368) Q Consensus 81 ~~~~~---~~~~~~~~~~~-l~~~~~n~~~~~-~~~~~~~~~~ll~Gnay~~i~r~-~~G~~~~L~~l~p~~v~~~~~~~ 154 (368) ...++ ......+|+.. ++...|||+++. +||+.++.+++++||||++++++ ..|+++.++|. T Consensus 59 ~~~~~~~~~~~~~~~~~l~~lL~~~PN~~~t~~~f~~~~~~~lll~Gna~i~~~~~~~~g~~~~l~p~------------ 126 (378) T protein:vir:94 59 KKSDVGSDTLISMAGSDLDEVLNWSPKGERNSMDFWRKVIKKLLSAPYVDLYAVFDDNTGELLDLLFA------------ 126 (378) T ss_pred cccCcccccccccccchHHHHHhhcCCCCCCHHHHHHHHHHHHhhcCceEEEEEeeCCCceEEEEEec------------ Confidence 21111 12233456643 556689998875 78889999999999999997765 45777777663 Q ss_pred eeEEEeCCceEEEEcCccEEEecCCCCcCCccccchhhHHHHHHHHHHHHHHHHHHHHhccCCCceeEEeCCCCccHHHH Q lcl|Aclame:pro 155 TYFFVQNWQQPYTFAAGSVFHLQEPDINQEVYGLPEYLSALNATWLNESATLFRRRYYKNGSHAGFILYMTDAAQKQEDV 234 (368) Q Consensus 155 ~~~~~~~~~~~~~~~~~dviH~r~~~~~~~~~G~spi~~a~~~i~~~~~a~~~~~~~f~ng~~p~gil~~~~~~l~~e~~ 234 (368) +...+|+++||||||.+ .++..|+||+..+++++.. ++++| .|+|+|++++ .+++++. T Consensus 127 --------~~~~~~~~~diiH~~~~--~~~~~g~s~l~~~~~~i~~----------~~~~~-~~~gil~~~~-~l~~~~~ 184 (378) T protein:vir:94 127 --------DDKKEYKPEELVRLTSP--FYINEDTSILDNALASIQT----------KLEQG-KLRGLLKINA-FLDIDNT 184 (378) T ss_pred --------CCeeEeeeeeeEEecCc--CCccchhHHHHHHHHHHHH----------HHhcc-cccceeeeCC-cCCHHHH Confidence 12346789999999964 4677899999999887753 24444 6899999875 5777665 Q ss_pred HHHHHHH----HHhccccccccccccccCccccccccccccchhhHHHHHHHHHHHHHHHHHHhCCChHHhccccccccc Q lcl|Aclame:pro 235 DTLREAM----KSAKGPGNFRNLFMYAPNGKKDGIQLLPVSEVAAKDEFWNIKNVTRDDQLAAHRVPPQLMGIIPNNTGG 310 (368) Q Consensus 235 ~~~k~~~----~~~~g~~n~~~~~~l~~~g~~~g~~~~pl~~~~~d~qf~e~~~~~~~~Ia~~fgVPp~~lg~~~~~~~~ 310 (368) +++++.| ++..+++|+|+++++ +.|++|++++++++|+|+ +.+++++++||++|||||++|+ ++ T Consensus 185 ~~~~~~~~~~~~~~~~~~~~g~~~vl-----~~g~~~~~l~~~~~~~~~-~~~~~~~~~Ia~~fgVP~~~l~------~~ 252 (378) T protein:vir:94 185 QEYREKALTTIKNMQEGSSYNGLTPV-----DNKTEIVELKKDYSVLNK-DEIDLIKSELLTGYFMNENILL------GT 252 (378) T ss_pred HHHHHHHHHHHHHhhcccccccceec-----CCCceEEEccCChhhhhH-HHHHHHHHHHHHHhCCCHHHhc------CC Confidence 5555555 445677889998888 678999999999999997 5678999999999999999994 22 Q ss_pred ccCHHHHHHHHHHHHHHHHHHHHH-HHHhhcCcc-------------eEeechhhhhcCChhhhhhhhhhcC Q lcl|Aclame:pro 311 FGDVEKAAMVFARNEVKPLQDRLL-AINDWIGDE-------------VVRFAPYALGGHDQPAAAPGGQRSA 368 (368) Q Consensus 311 ~sn~e~~~~~f~~~tl~P~~~~ie-~l~~~l~~~-------------~~~F~~~~Llr~D~~~ra~~~~~~~ 368 (368) +.|++.+.|+++||.||+++|| +++++|.+. .++||.+.|+++|.++|++.+++.. T Consensus 253 --~se~~~~~f~~~tL~P~~~~ie~~l~~~Ll~~~er~~g~~~~~~~~~~f~~~~l~~~d~~~~~~~~~~~~ 322 (378) T protein:vir:94 253 --ASQEQQIYFYNSTIIPLLIQLEKELTYKLISTNRRRVVKGNLYYERIIVDNQLFKFATLKELIDLYHENI 322 (378) T ss_pred --hHHHHHHHHHHHHHHHHHHHHHHHHHhhcCChhHhhhhhhcccccceeecchhhhhcCHHHHHHHHHHHH Confidence 4478999999999999999999 599887542 2789999999999999999887766 No 102 >protein:vir:1661 Length: 378 # NCBI annotation: unknown # Family: family:all:2379 # MgeID: mge:34 # MgeName: sk1 # Cross-refs: genbank:acc:NP_044950;genbank:gi:9629657;genbank:GeneID:1261302 Probab=100.00 E-value=1.2e-45 Score=266.82 Aligned_cols=298 Identities=7% Similarity=-0.015 Sum_probs=204.5 Q ss_pred CCcCCCCccccccccccccccCCCcchhhccccCceEEEECCCceeccChHHHHHHHHHHhccchhcccccHHHHHHHHH Q lcl|Aclame:pro 1 MSRNKTRRAARAASAHVRTANTDAPTEHHTDRAAQAEVFSFGDPVEVLDRRELLDYVECMRMGQWYEPPMPWDGLARSFR 80 (368) Q Consensus 1 m~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~r 80 (368) |.-...-+.-... ..+.. .+....+ ......+...++..|+.++. ++++..|+.+ +.+ T Consensus 1 Mg~f~~~~~~~~~-----~~~~~---------~~~~~~~--~~~~~~~~~~~v~~~i~~Ia-~~iA~l~~~~-----~~~ 58 (378) T protein:vir:16 1 MNLFGKVVSFSRG-----KLNND---------TQRVTAW--QNEAVEYTSAFVTNIHNKIA-NEITKVEFNH-----VKY 58 (378) T ss_pred Cccchhhhhhhcc-----cccCC---------cceeeec--ccchhhHHHHHHHHHHHHHH-hhhhhCceeE-----EEE Confidence 7655321110000 00000 0111111 11112233444556666554 6688888642 112 Q ss_pred hcccc---cchhhhccch-HHhhccCCCCcCH-HHHHHHHHhHhhhCCeeEEEEecCC-cceEEEEEecccccccccCCC Q lcl|Aclame:pro 81 AAAHH---SSAVYVKRNI-LVSTFIPHPLLSR-ATFERLVLDWQVFGNAYLERRENVL-GGTIRLDTPLAKYVRRGLDLN 154 (368) Q Consensus 81 ~~~~~---~~~~~~~~~~-~l~~~~~n~~~~~-~~~~~~~~~~ll~Gnay~~i~r~~~-G~~~~L~~l~p~~v~~~~~~~ 154 (368) ..... ......+|+. .++...|||+++. +||+.++.+++++||||++++|++. |+++.++|.. T Consensus 59 ~~~~~~~~~~~~~~~~~l~~lL~~~PN~~~t~~~f~~~~~~~lll~Gna~i~~~~d~~~g~~~~l~~~~----------- 127 (378) T protein:vir:16 59 KKSDVGSDTLISMAGSDLDEVLNWSPKGERNSMDFWRKVIKKLLRAPYVDLYAVFDDNTGELLDLLFAD----------- 127 (378) T ss_pred cccccccccccccccchHHHHHhhcCCCCCCHHHHHHHHHHHHhhcCceEEEEEeecCCceEEEEEecC----------- Confidence 11111 1122345553 4555689998875 7889999999999999999988764 6666665531 Q ss_pred eeEEEeCCceEEEEcCccEEEecCCCCcCCccccchhhHHHHHHHHHHHHHHHHHHHHhccCCCceeEEeCCCCccHHHH Q lcl|Aclame:pro 155 TYFFVQNWQQPYTFAAGSVFHLQEPDINQEVYGLPEYLSALNATWLNESATLFRRRYYKNGSHAGFILYMTDAAQKQEDV 234 (368) Q Consensus 155 ~~~~~~~~~~~~~~~~~dviH~r~~~~~~~~~G~spi~~a~~~i~~~~~a~~~~~~~f~ng~~p~gil~~~~~~l~~e~~ 234 (368) ...+|+++||||||.+ .++..|.||+..+++++.. .+++ +.|+|+|+++. .+++++. T Consensus 128 ---------~~~~~~~~diih~r~~--~~~~~~~s~l~~~~~~i~~----------~~~~-~~~~g~l~~~~-~l~~~~~ 184 (378) T protein:vir:16 128 ---------DKKEYKPEELVRLTSP--FYINEDTSILDNALASIQT----------KLEQ-GKLRGLLKINA-FLDIDNT 184 (378) T ss_pred ---------CeeEecccceEEecCc--cCccchhHHHHHHHHHHHH----------HHhc-CccceeeEeCC-cCCHHHH Confidence 2356789999999964 4577799999888876642 3444 46899999875 5677655 Q ss_pred HHHH----HHHHHhccccccccccccccCccccccccccccchhhHHHHHHHHHHHHHHHHHHhCCChHHhccccccccc Q lcl|Aclame:pro 235 DTLR----EAMKSAKGPGNFRNLFMYAPNGKKDGIQLLPVSEVAAKDEFWNIKNVTRDDQLAAHRVPPQLMGIIPNNTGG 310 (368) Q Consensus 235 ~~~k----~~~~~~~g~~n~~~~~~l~~~g~~~g~~~~pl~~~~~d~qf~e~~~~~~~~Ia~~fgVPp~~lg~~~~~~~~ 310 (368) ++++ +.|++..+++|+|+++++ +.|++|++++++++|+|+.+ +++++++||++|||||.+|+ T Consensus 185 ~~~~~~~~~~~~~~~~~~~~g~~~vl-----~~g~~~~~l~~~~~~~~~~~-~~~~~~~Ia~~fgVPp~~l~-------- 250 (378) T protein:vir:16 185 QEYREKALTTIKNMQEGSSYNGLTPV-----DNKTEIVELKKDYSVLNKDE-IDLIKSELLTGYFMNENILL-------- 250 (378) T ss_pred HHHHHHHHHHHHHhhcccccccceEc-----CCCceEEEccCChhhhhHHH-HHHHHHHHHHHhCCCHHHhc-------- Confidence 5444 444455678899999988 67899999999999999855 57999999999999999984 Q ss_pred ccCHHHHHHHHHHHHHHHHHHHHH-HHHhhcCcc-------------eEeechhhhhcCChhhhhhhhhhcC Q lcl|Aclame:pro 311 FGDVEKAAMVFARNEVKPLQDRLL-AINDWIGDE-------------VVRFAPYALGGHDQPAAAPGGQRSA 368 (368) Q Consensus 311 ~sn~e~~~~~f~~~tl~P~~~~ie-~l~~~l~~~-------------~~~F~~~~Llr~D~~~ra~~~~~~~ 368 (368) +++.|++.+.|+++||.||+++|| ++|++|.+. .++|+.+.|+++|.++|++..++.- T Consensus 251 g~~~e~~~~~f~~~tl~P~~~~ie~~l~~kLl~~~e~~~~~~~~~~~~~~f~~~~l~~~d~~~~~~~~~~~~ 322 (378) T protein:vir:16 251 GTASQEQQIYFYNSTIIPLLIQLEKELTYKLISTNRRRVVKGNLYYERIIVDNQLFKFATLKELIDLYHENI 322 (378) T ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHhhcCChhhhhhhhhcccccceeeccchhhhcCHHHHHHHHHHHH Confidence 234589999999999999999998 599887542 2789999999999999999876655 No 103 >protein:vir:858 Length: 378 # NCBI annotation: putative portal protein # Family: family:all:2379 # MgeID: mge:18 # MgeName: bIL170 # Cross-refs: genbank:acc:NP_047117;genbank:gi:9630570;genbank:GeneID:1261758 Probab=100.00 E-value=2.8e-43 Score=253.90 Aligned_cols=295 Identities=8% Similarity=0.005 Sum_probs=197.8 Q ss_pred CCcCCCCcc-ccccccccccccCCCcchhhccccCceEEEE-CCCceeccChHHHHHHHHHHhccchhcccccHHHHHHH Q lcl|Aclame:pro 1 MSRNKTRRA-ARAASAHVRTANTDAPTEHHTDRAAQAEVFS-FGDPVEVLDRRELLDYVECMRMGQWYEPPMPWDGLARS 78 (368) Q Consensus 1 m~~~k~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~ 78 (368) |+.-.+-+. .+... .. +. ...|+ +|+-. .+...+++.|+.++. ++++..|+.+ T Consensus 1 M~~f~k~~~~~~~~~------~~--------~~---~~~~~~~~~~~-~~~~~~v~~~v~~ia-~~iA~lp~~~------ 55 (378) T protein:vir:85 1 MNLFGKVVSFSRGKL------NN--------DT---QRVTAWQNEAV-EYTSAFVTNIHNKIA-NEITKVEFNH------ 55 (378) T ss_pred Cchhhhhhhhhhccc------cc--------CC---cceeeeeccch-hhhhHHHHHHHHHHH-HhHhhCceeE------ Confidence 886432111 11000 00 00 11122 23222 234455666766654 6688888653 Q ss_pred HHhccc-cc---chhhhccc-hHHhhccCCCCcCH-HHHHHHHHhHhhhCCeeEEEE-ecCCcceEEEEEeccccccccc Q lcl|Aclame:pro 79 FRAAAH-HS---SAVYVKRN-ILVSTFIPHPLLSR-ATFERLVLDWQVFGNAYLERR-ENVLGGTIRLDTPLAKYVRRGL 151 (368) Q Consensus 79 ~r~~~~-~~---~~~~~~~~-~~l~~~~~n~~~~~-~~~~~~~~~~ll~Gnay~~i~-r~~~G~~~~L~~l~p~~v~~~~ 151 (368) ++.... ++ .....+|+ ..++..+|||+++. +||+.++.+++++||||++++ ++..|++..+++ T Consensus 56 ~~~~~~~~~~~~~~~~~~~~l~~lL~~~PN~~~t~~~f~~~~~~~lll~Gnayi~~i~~~~~g~~~~~~~---------- 125 (378) T protein:vir:85 56 VKYKKSDVGSDTLISMAGSDLDEVLNWSYKGEHNSMEFWQKVIKKLLCTRYVDLYPIFDSETGELLDLLF---------- 125 (378) T ss_pred EEEeccccccccccccccchHHHHHhccCCCCCCHHHHHHHHHHHHhhcCCeEEEEeecCCCceEEEEEe---------- Confidence 222221 11 12234555 34566789998875 788899999999999999864 444555443332 Q ss_pred CCCeeEEEeCCceEEEEcCccEEEecCCCCcCCccccchhhHHHHHHHHHHHHHHHHHHHHhccCCCceeEEeCCCCccH Q lcl|Aclame:pro 152 DLNTYFFVQNWQQPYTFAAGSVFHLQEPDINQEVYGLPEYLSALNATWLNESATLFRRRYYKNGSHAGFILYMTDAAQKQ 231 (368) Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~dviH~r~~~~~~~~~G~spi~~a~~~i~~~~~a~~~~~~~f~ng~~p~gil~~~~~~l~~ 231 (368) .+ ..+.+.++||||++.+...++ +.+++..+.+.+ ...+++ +.|+|+|++++ .+++ T Consensus 126 ---------~~-~~~~~~~~dvih~~~~~~~~~--~~~~~~~a~~~~----------~~~~~~-~~~~g~l~~~~-~l~~ 181 (378) T protein:vir:85 126 ---------AN-DKKEYKPEELVRLVSPFYINE--DTSILDNALASI----------QTKLEQ-GKLRGLLKINA-FLDI 181 (378) T ss_pred ---------cC-CCEEEcccceEEEecCcCccc--hhhHHHHHHHHH----------HHHHhc-CCcceEEEeCC-cCCH Confidence 12 234677899999985432222 344444444333 233455 47899999875 5787 Q ss_pred HHHHHHHHHHH----HhccccccccccccccCccccccccccccchhhHHHHHHHHHHHHHHHHHHhCCChHHhcccccc Q lcl|Aclame:pro 232 EDVDTLREAMK----SAKGPGNFRNLFMYAPNGKKDGIQLLPVSEVAAKDEFWNIKNVTRDDQLAAHRVPPQLMGIIPNN 307 (368) Q Consensus 232 e~~~~~k~~~~----~~~g~~n~~~~~~l~~~g~~~g~~~~pl~~~~~d~qf~e~~~~~~~~Ia~~fgVPp~~lg~~~~~ 307 (368) ++.+++++.|+ +..+++|++++++| +.|++|++++++++++|+ +.+++++++||++|||||++|+ T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~g~~~vl-----~~g~~~~~l~~~~~~~~~-~~~~~~~~~Ia~~fgVPp~~l~----- 250 (378) T protein:vir:85 182 DNTQEYREKALATIKNMQEGSSYNGLTPV-----DNKTEIVELKKDYSVLNK-DEIELIKSELLTGYFMNENILL----- 250 (378) T ss_pred HHHHHHHHHHHHHHHHhhcccccccceec-----CCCceEEeccCChhhhhH-HHHHHHHHHHHHHhCCCHHHhc----- Confidence 77666666654 44577899999888 678999999999999997 6679999999999999999984 Q ss_pred cccccCHHHHHHHHHHHHHHHHHHHHH-HHHhhcCcc-------------eEeechhhhhcCChhhhhhhhhhcC Q lcl|Aclame:pro 308 TGGFGDVEKAAMVFARNEVKPLQDRLL-AINDWIGDE-------------VVRFAPYALGGHDQPAAAPGGQRSA 368 (368) Q Consensus 308 ~~~~sn~e~~~~~f~~~tl~P~~~~ie-~l~~~l~~~-------------~~~F~~~~Llr~D~~~ra~~~~~~~ 368 (368) +++.|++.+.|+++||.||+++|| +||++|.+. .++||.+.|+++|.++|++.+++.- T Consensus 251 ---~s~~e~~~~~f~~~tL~P~~~~ie~~l~~kLl~~~er~~~~~~~~~~~~~f~~~~l~~~d~~~~~~~~~~~~ 322 (378) T protein:vir:85 251 ---GTATQEQQIYFYNSTIIPLLIQLEKELTYKLISTNRRRVVKGNLYYERIIVDNQLFKFATLKELIDLYHENI 322 (378) T ss_pred ---CCchHHHHHHHHHHHHHHHHHHHHHHHHhhcCChhhhhhhhhccccceeeecchhhhhcCHHHHHHHHHHHH Confidence 234589999999999999999999 599887532 1679999999999999999877766 No 104 >protein:vir:94869 Length: 378 # NCBI annotation: putative portal protein # Family: family:all:2379 # MgeID: mge:1532 # MgeName: P008 # Cross-refs: genbank:acc:YP_762515;genbank:gi:115304214;genbank:GeneID:5141182 Probab=100.00 E-value=4e-43 Score=253.01 Aligned_cols=297 Identities=7% Similarity=-0.007 Sum_probs=201.3 Q ss_pred CCcCCCCccccccccccccccCCCcchhhccccCceEEEE-CCCceeccChHHHHHHHHHHhccchhcccccHHHHHHHH Q lcl|Aclame:pro 1 MSRNKTRRAARAASAHVRTANTDAPTEHHTDRAAQAEVFS-FGDPVEVLDRRELLDYVECMRMGQWYEPPMPWDGLARSF 79 (368) Q Consensus 1 m~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~ 79 (368) |+--.+.+...... .. .+...+++ +|..+ .+...++..|+..+. ..++..|+.. +. T Consensus 1 M~if~~~~~~~~~~----~~------------~~~~~~~~~~~~~~-~~~~~~v~~~v~~Ia-~~iA~lp~~~-----~~ 57 (378) T protein:vir:94 1 MNLFGKVVSFSRGK----LN------------NDTQRVTAWQNEAV-EYTSAFVTNIHNKIA-NEITKVEFNH-----VK 57 (378) T ss_pred CchhHHhHhhhhcc----cc------------cCcceeeeeecchh-hhhhHHHHHHHHHHH-HhHhhCceee-----ee Confidence 76443222110000 00 01112222 34332 234455677776654 5678888642 22 Q ss_pred Hhccccc---chhhhccc-hHHhhccCCCCcCH-HHHHHHHHhHhhhCCeeEEE-EecCCcceEEEEEecccccccccCC Q lcl|Aclame:pro 80 RAAAHHS---SAVYVKRN-ILVSTFIPHPLLSR-ATFERLVLDWQVFGNAYLER-RENVLGGTIRLDTPLAKYVRRGLDL 153 (368) Q Consensus 80 r~~~~~~---~~~~~~~~-~~l~~~~~n~~~~~-~~~~~~~~~~ll~Gnay~~i-~r~~~G~~~~L~~l~p~~v~~~~~~ 153 (368) +....++ .....+|+ ..++...|||+++. +||+.++.++++.||||+++ .++..|++..+++. T Consensus 58 ~~~~~~~~~~~~~~~~~~l~~lLn~~PN~~~t~~~f~~~~~~~lll~Gnayi~~i~~~~~g~~~~~~~~----------- 126 (378) T protein:vir:94 58 YKKSDVGSDTLISMAGSDLDEVLNWSSKGERNSMEFWQKVIKKLLTTRYIDLYPIFDSETGELLDLLFA----------- 126 (378) T ss_pred ecccccccccccccccchHHHHHhhcCCCCCCHHHHHHHHHHHHhhcCCeEEEEEeeCCCCcEEEEEEe----------- Confidence 2222121 12234455 34566789998875 78889999999999999985 45566776655442 Q ss_pred CeeEEEeCCceEEEEcCccEEEecCCCCcCCccccchhhHHHHHHHHHHHHHHHHHHHHhccCCCceeEEeCCCCccHHH Q lcl|Aclame:pro 154 NTYFFVQNWQQPYTFAAGSVFHLQEPDINQEVYGLPEYLSALNATWLNESATLFRRRYYKNGSHAGFILYMTDAAQKQED 233 (368) Q Consensus 154 ~~~~~~~~~~~~~~~~~~dviH~r~~~~~~~~~G~spi~~a~~~i~~~~~a~~~~~~~f~ng~~p~gil~~~~~~l~~e~ 233 (368) .+ ..+|+++||||++.+...++ +.+++..+.+.+. ..+++ +.++|+|+.+. .+++++ T Consensus 127 -------~~--~~~~~~~dvih~~~~~~~~~--~~~~~~~~~~~~~----------~~~~~-~~~~g~l~~~~-~l~~~~ 183 (378) T protein:vir:94 127 -------ND--KKEYKPEELVRLTSPFYINE--DTSILDNALASIQ----------TKLEQ-GKLRGLLKINA-FLDIDN 183 (378) T ss_pred -------cC--cEEechhceeeecCcCCccc--chhHHHHHHHHHH----------HHHhh-CCcccceeeCC-cCCHHH Confidence 12 24678999999996543333 5566666655443 23344 46789999875 577655 Q ss_pred H----HHHHHHHHHhccccccccccccccCccccccccccccchhhHHHHHHHHHHHHHHHHHHhCCChHHhcccccccc Q lcl|Aclame:pro 234 V----DTLREAMKSAKGPGNFRNLFMYAPNGKKDGIQLLPVSEVAAKDEFWNIKNVTRDDQLAAHRVPPQLMGIIPNNTG 309 (368) Q Consensus 234 ~----~~~k~~~~~~~g~~n~~~~~~l~~~g~~~g~~~~pl~~~~~d~qf~e~~~~~~~~Ia~~fgVPp~~lg~~~~~~~ 309 (368) . +++++.|++..++.|+++++++ ++|++|++++++++|+|+ +.+++++++||++|||||++|+ + T Consensus 184 ~~~~~e~~~~~~~~~~~~~n~~~~~vl-----~~g~~~~~l~~~~~~~~~-~~~~~~~~~Ia~~fgvPp~~l~------g 251 (378) T protein:vir:94 184 TQEYREKALATIKNMQEGSSYNGLTPV-----DNKTEIVELKKDYSVLNK-DEIDLIKSELLTGYFMNENILL------G 251 (378) T ss_pred HHHHHHHHHHHHHHhhcccccccceec-----cCCceEEEccCChHHhhH-HHHHHHHHHHHHHhCCCHHHhc------C Confidence 4 5555555666778888998888 678999999999999996 6678999999999999999984 2 Q ss_pred cccCHHHHHHHHHHHHHHHHHHHHH-HHHhhcCcc-------------eEeechhhhhcCChhhhhhhhhhcC Q lcl|Aclame:pro 310 GFGDVEKAAMVFARNEVKPLQDRLL-AINDWIGDE-------------VVRFAPYALGGHDQPAAAPGGQRSA 368 (368) Q Consensus 310 ~~sn~e~~~~~f~~~tl~P~~~~ie-~l~~~l~~~-------------~~~F~~~~Llr~D~~~ra~~~~~~~ 368 (368) ++ .|++.+.|+++||.||+++|| +||++|.+. .++||.+.|+++|.+++++.+++.- T Consensus 252 ~~--~e~~~~~f~~~tl~P~~~~ie~~l~~~Ll~~~e~~~g~~~~~~~~~~f~~~~l~~~d~~~~~e~~~~~~ 322 (378) T protein:vir:94 252 TA--TQEQQIYFYNSTIIPLLIQLEKELTYKLISTNRRRVVKGNLYYERIIVDNQLFKFATLKELIDLYHENI 322 (378) T ss_pred Cc--hHHHHHHHHHHHHHHHHHHHHHHHHhhcCChhHhhhhhhhcccceeEeecchhhhcCHHHHHHHHHHHH Confidence 32 378899999999999999999 599887532 2679999999999999999888766 No 105 >protein:vir:4698 Length: 251 # NCBI annotation: hypothetical protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:102 # MgeName: phiPV83 # Cross-refs: genbank:acc:NP_061630;genbank:gi:9635717;genbank:GeneID:1262980 Probab=100.00 E-value=1.7e-39 Score=233.14 Aligned_cols=239 Identities=12% Similarity=0.143 Sum_probs=167.9 Q ss_pred CCcCCCCccccccccccccccCCCcchhhc-cccC-ceEEEECCCceeccChHHHHHHHHHHhccchhcccccHHHHHHH Q lcl|Aclame:pro 1 MSRNKTRRAARAASAHVRTANTDAPTEHHT-DRAA-QAEVFSFGDPVEVLDRRELLDYVECMRMGQWYEPPMPWDGLARS 78 (368) Q Consensus 1 m~~~k~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~ 78 (368) |.--+.+.++. ..... .......... ...+ ....++ +...+...++++|+.++. .+++..|+.+. T Consensus 1 MglF~~~~~r~-~~~~~---~~~~~~~~~~~~~~~~~~~~v~---~~~al~~~~v~~~i~~ia-~~iA~lp~~~~----- 67 (251) T protein:vir:46 1 MGIFYKNEKRD-LQYNE---DDLQMMVQTLPSFQGTKLRQYK---DIEAIRHSDIFTAVMMIA-SDLARMPIRVT----- 67 (251) T ss_pred CCccccccccc-cCCCc---cchhhhhhhhccccCcCcceec---hhhhhccHHHHHHHHHHH-HhHhhCceEEe----- Confidence 87553332221 11110 0000000100 0000 011111 233456667777776654 66888887643 Q ss_pred HHhcccccchhhhccchH-HhhccCCCCcCH-HHHHHHHHhHhhhCCeeEEEEecCCcceEEEEEecccccccccCCCe- Q lcl|Aclame:pro 79 FRAAAHHSSAVYVKRNIL-VSTFIPHPLLSR-ATFERLVLDWQVFGNAYLERRENVLGGTIRLDTPLAKYVRRGLDLNT- 155 (368) Q Consensus 79 ~r~~~~~~~~~~~~~~~~-l~~~~~n~~~~~-~~~~~~~~~~ll~Gnay~~i~r~~~G~~~~L~~l~p~~v~~~~~~~~- 155 (368) +. .....+|+.. ++...|||+++. +||+.++.+++++||||++|.||..|+|++|+|++|.+|++..+.++ T Consensus 68 -~~-----~~~~~~~~~~~ll~~~Pn~~~t~~~f~~~l~~~lll~Gnay~~i~r~~~G~~~~L~~i~~~~v~v~~~~~g~ 141 (251) T protein:vir:46 68 -VN-----GQINYSDRIVNLLNTRPNPMYNGYIFKLVVFVSALLTSHGYIEITRDKTGEPMNLTFRKTSEIELKSDARGR 141 (251) T ss_pred -eC-----ccccccchHHHHHhccCCCCCCHHHHHHHHHHHHhhcCCeEEEEEECCCCcEEEEEEECCceEEEEECCCCc Confidence 21 1222355543 455789998875 78899999999999999999999999999999999999999876553 Q ss_pred -eEEE-e----CCceEEEEcCccEEEecCCCCcCCccccchhhHHHHHHHHHHHHHHHHHHHHhccCCCceeEEeCCCCc Q lcl|Aclame:pro 156 -YFFV-Q----NWQQPYTFAAGSVFHLQEPDINQEVYGLPEYLSALNATWLNESATLFRRRYYKNGSHAGFILYMTDAAQ 229 (368) Q Consensus 156 -~~~~-~----~~~~~~~~~~~dviH~r~~~~~~~~~G~spi~~a~~~i~~~~~a~~~~~~~f~ng~~p~gil~~~~~~l 229 (368) +|.+ . .++....++++||||||.++ .++++|+||+.+++++|.++.++++|..++|+||++|+|||++++... T Consensus 142 ~~~~~~~~~~~~~g~~~~~~~~diiH~r~~~-~dg~~G~spi~~~~~~i~~~~~~~~~~~~~f~ng~~p~gil~~~~~l~ 220 (251) T protein:vir:46 142 LYYFHQRIDSNGNNIERNVKFEDMLDIKFYS-LDGINGLSLLDTLSRTIESDNNGKDFLNNFLRNGTHAGGILKMKGVLD 220 (251) T ss_pred EEEEEEEeccCCcceeEEECCccEEEecCcC-CCCeeecCHHHHHHHHHHHHHHHHHHHHHHHHccCCCcEEEEeCCCCC Confidence 3222 1 24667899999999999887 479999999999999999999999999999999999999999987656 Q ss_pred cHHHHHHHHHHHHHhc-cccccccccccccCcccccccc Q lcl|Aclame:pro 230 KQEDVDTLREAMKSAK-GPGNFRNLFMYAPNGKKDGIQL 267 (368) Q Consensus 230 ~~e~~~~~k~~~~~~~-g~~n~~~~~~l~~~g~~~g~~~ 267 (368) ++++++++++.|++.+ |.+|+|++.+ ||+= T Consensus 221 ~~e~~~~~~~~~~~~~~g~~n~g~~~~--------gm~~ 251 (251) T protein:vir:46 221 NKKARDRAREEFPKVLVELNKLGKLSY--------SMNQ 251 (251) T ss_pred CHHHHHHHHHHHHHHhcCccccccccc--------ccCC Confidence 7888999999998875 4589998654 2221 No 106 >protein:vir:5249 Length: 437 # NCBI annotation: hypothetical protein # Family: family:all:297 # MgeID: mge:117 # MgeName: Aaphi23 # Cross-refs: genbank:acc:NP_852754;genbank:gi:31544029;interpro:IPR006445;uniprot:Q7Y5U6;genbank:GeneID:2753529 Probab=99.68 E-value=1.6e-17 Score=112.66 Aligned_cols=332 Identities=10% Similarity=0.015 Sum_probs=175.5 Q ss_pred CCcCCCCccccccccccccccCCCcchhhccccCceEEEECCCceeccChHHHHHHHHHHhccchhcccccHHHHHHHHH Q lcl|Aclame:pro 1 MSRNKTRRAARAASAHVRTANTDAPTEHHTDRAAQAEVFSFGDPVEVLDRRELLDYVECMRMGQWYEPPMPWDGLARSFR 80 (368) Q Consensus 1 m~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~r 80 (368) |. ....-..... -.++......+++|.|... +... +..+++.+.++ ...++.+.. T Consensus 1 ~~---------~~D~~~~~~~-------~~g~~~~~~~~~~~~~~~~-~~~~---l~a~Y~~~~l~-----~~~vd~~a~ 55 (437) T protein:vir:52 1 MK---------FFDGIKSLAL-------KLGSKQEQTYYSPSLSLTD-DLVQ---LEALWRDNWIA-----NKVCIKRPE 55 (437) T ss_pred Cc---------hhhhhHhHHh-------cCCCccccceeecCccccc-cHHH---HHHHHHhCchh-----hHHhhcchH Confidence 21 1110000000 0011111233445555432 2222 22222222222 222222111 Q ss_pred hcccccchhhhc---cchH-HhhccCCCCcCHHHHHHHHHhHhhhCCeeEEEEecCC---------cceEEEEEeccccc Q lcl|Aclame:pro 81 AAAHHSSAVYVK---RNIL-VSTFIPHPLLSRATFERLVLDWQVFGNAYLERRENVL---------GGTIRLDTPLAKYV 147 (368) Q Consensus 81 ~~~~~~~~~~~~---~~~~-l~~~~~n~~~~~~~~~~~~~~~ll~Gnay~~i~r~~~---------G~~~~L~~l~p~~v 147 (368) -....+..+..+ .... .+....+..--.+-+...+...-++|+||+++.+++. |.+..|.++++..+ T Consensus 56 d~~r~~~~i~~~d~~~~~~~~~~~~~~~l~~~~~l~~a~~~~rl~G~a~i~i~~d~~~~~~pl~~~~~~~~~~v~~~~~v 135 (437) T protein:vir:52 56 DMVRNWREIYSNDLNSKQLDLFTKFERSLKLRETLTKALQWSSLYGSVGLLVVTDSQNTSAPLKPTERLKRLIILPKWKI 135 (437) T ss_pred HhhcCCceEecCCCCHHHHHHHHHHHHhhcHHHHHHHHHHhcccccceEEEEEecCCCcccccccCCceeEEEEechhhc Confidence 100011111110 0000 0000000000112223333344489999999998763 67889999998888 Q ss_pred ccccCC-----------CeeEEEeCCceEEEEcCccEEEecCC---CCcCCccccchhhHHHHHHHHHHHHHHHHHHHHh Q lcl|Aclame:pro 148 RRGLDL-----------NTYFFVQNWQQPYTFAAGSVFHLQEP---DINQEVYGLPEYLSALNATWLNESATLFRRRYYK 213 (368) Q Consensus 148 ~~~~~~-----------~~~~~~~~~~~~~~~~~~dviH~r~~---~~~~~~~G~spi~~a~~~i~~~~~a~~~~~~~f~ 213 (368) +..... ..+|.+..++..+.+.++.||||.+. -+.+.++|+|.++.+.+.|.....+......++. T Consensus 136 ~~~~~~~~dp~s~~fg~p~~y~v~~~~~~~~iH~SRii~~~~~~~~~~~~~~~G~s~le~~~~~i~~~~~~~~~~~~l~~ 215 (437) T protein:vir:52 136 SPTGTKDDDVLSPNFGRYSEYSILGGSQSITVHHSRLIILNANDAPLSDNDIWGVSDLEKIIDVLKRFDSASVNVGDLIF 215 (437) T ss_pred cccccccccccccccCcceEEEEecCCcceeEccceeEEecCccCCCccccccCCchHHHHHHHHHHHHHHHHHHHHHHH Confidence 642211 12566776667788999999999743 2346788999999999999999888888888776 Q ss_pred ccCCCceeEEeCC--CCccHHHHHHHHHHHHHhccccccccccccccCccccccccccccchhhHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 214 NGSHAGFILYMTD--AAQKQEDVDTLREAMKSAKGPGNFRNLFMYAPNGKKDGIQLLPVSEVAAKDEFWNIKNVTRDDQL 291 (368) Q Consensus 214 ng~~p~gil~~~~--~~l~~e~~~~~k~~~~~~~g~~n~~~~~~l~~~g~~~g~~~~pl~~~~~d~qf~e~~~~~~~~Ia 291 (368) +...+ ++++++ ..++....+.+.+.++......+.+..+++.. +-+|+.++.+..+ +-+...+..++|| T Consensus 216 ~~~~~--v~k~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~d~-----~~~~e~~~~~~sg--l~~~l~~~~~~ia 286 (437) T protein:vir:52 216 ESKID--IFKIAGLSDKIAAGMENEVASVISAVQEIKSATNSLLLDA-----ENEYDRKELTFTG--LKDLLTEFRNAVA 286 (437) T ss_pred HcCCC--ceecchHHHHhcCCcHHHHHHHHHHHHHhcCCCceEEEcC-----CcceEEEecCcCC--HHHHHHHHHHHHH Confidence 64443 344442 12333333444555544332344466666632 3345555544433 3355667788999 Q ss_pred HHhCCChHHhcccccccccccCHHHHHHHHHH-------HHHHHHHHHHHH-HHhh-cCc--ceEeechhhhhcCChhhh Q lcl|Aclame:pro 292 AAHRVPPQLMGIIPNNTGGFGDVEKAAMVFAR-------NEVKPLQDRLLA-INDW-IGD--EVVRFAPYALGGHDQPAA 360 (368) Q Consensus 292 ~~fgVPp~~lg~~~~~~~~~sn~e~~~~~f~~-------~tl~P~~~~ie~-l~~~-l~~--~~~~F~~~~Llr~D~~~r 360 (368) ++++||..+|... +.++.++.++..+.|+. ..|.|.++++-. +-+. ++. .-+.|.+..|...|.+.+ T Consensus 287 aa~~iP~t~L~G~--s~~Glasge~D~~~yyd~i~~~Qe~~l~p~le~l~~~i~~~~~g~~~~~~~~~f~pL~~~s~kek 364 (437) T protein:vir:52 287 GAADMPVTILFGQ--SVSGLASGDEDIQNYHEAIRRLQETRLRPIFEIIDPLICNELFGGLPADWWFEFVPLTTVKQEQQ 364 (437) T ss_pred HHhcCchhhhcCc--CcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCcCCcCHHHH Confidence 9999999887322 23455777778888876 456777766543 2221 221 124555668999999998 Q ss_pred hhhhhhcC Q lcl|Aclame:pro 361 APGGQRSA 368 (368) Q Consensus 361 a~~~~~~~ 368 (368) |+...+-| T Consensus 365 ae~~~~~a 372 (437) T protein:vir:52 365 INMLNTFA 372 (437) T ss_pred HHHHHHHH Confidence 88654444 No 107 >protein:vir:79647 Length: 435 # NCBI annotation: PorT # Family: family:all:297 # MgeID: mge:1872 # MgeName: TLS # Cross-refs: genbank:acc:YP_001285520;genbank:gi:148734503;genbank:GeneID:5220005 Probab=99.40 E-value=5.9e-14 Score=93.10 Aligned_cols=332 Identities=8% Similarity=-0.043 Sum_probs=157.6 Q ss_pred CCcCCCCccccccccccccccCCCcchhhccccCc--eEEEECCCceeccChHHHHHHHHHHhccchhcccccHHHHHHH Q lcl|Aclame:pro 1 MSRNKTRRAARAASAHVRTANTDAPTEHHTDRAAQ--AEVFSFGDPVEVLDRRELLDYVECMRMGQWYEPPMPWDGLARS 78 (368) Q Consensus 1 m~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~ 78 (368) |||+|++.....+= . +. .....+. -..++ + ..++.. .+..+++.+.++..-|..-. ..+ T Consensus 5 m~~~~~~~~~~D~~---~-------~~-~~~~~g~~~~~~~~-~---~~~~~~---~l~~~Y~~~~l~~~~Vd~~a-ed~ 65 (435) T protein:vir:79 5 MSDKVKAITKEDGY---N-------EI-FGSKDGTFRPNAFY-M---QRAAFK---ALSQFYEEDGMARRIVDVIP-EEM 65 (435) T ss_pred cccccccchhhcch---h-------hh-hcccccccccCccc-C---CcCCHH---HHHHHHhcCchhhhhhccch-HHh Confidence 99776543331110 0 00 0000000 00010 0 011111 12222222222221111100 111 Q ss_pred HHhcccccchhhhccchHHhhccCCCCcCHHHHHHHHHhHhhhCCeeEEEEe-cC---------CcceEEEEEecccccc Q lcl|Aclame:pro 79 FRAAAHHSSAVYVKRNILVSTFIPHPLLSRATFERLVLDWQVFGNAYLERRE-NV---------LGGTIRLDTPLAKYVR 148 (368) Q Consensus 79 ~r~~~~~~~~~~~~~~~~l~~~~~n~~~~~~~~~~~~~~~ll~Gnay~~i~r-~~---------~G~~~~L~~l~p~~v~ 148 (368) .|. +..+.-+.+...........-..+-+...+....++|.+++.+.. +. .|.+..|.++++..++ T Consensus 66 ~r~----g~~i~g~~~~~~~~~~~~~l~~~~~l~~a~~~~rl~G~~~i~i~~~d~~~~~~Pl~~~g~i~~i~v~d~~~i~ 141 (435) T protein:vir:79 66 VTP----GFKVDGVKNEKSFKSRWDELRLNAKIIDALSWSRLFGGSAILAVVADNKMLKSPVKPGAQLEDIRVYDRYQIT 141 (435) T ss_pred hcC----CceecCCChHHHHHHHHHHhhHHHHHHHHHHhhhccccEEEEEEecCCCCcccccccCCceeeEEeechhhcc Confidence 121 111111101000000000011113334445555688998888774 22 2456688888887776 Q ss_pred cccC-----CC-----eeEEEeCCc--eEEEEcCccEEEecCC------CCcCCccccchh-hHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 149 RGLD-----LN-----TYFFVQNWQ--QPYTFAAGSVFHLQEP------DINQEVYGLPEY-LSALNATWLNESATLFRR 209 (368) Q Consensus 149 ~~~~-----~~-----~~~~~~~~~--~~~~~~~~dviH~r~~------~~~~~~~G~spi-~~a~~~i~~~~~a~~~~~ 209 (368) +... .. .+|.+..++ ..+.+.++.||||.+. .+...++|.||+ +.+.+.|.....+..... T Consensus 142 ~~~~~~dp~sp~fg~P~~y~v~~~~~~~~~~iH~SRli~~~g~~~p~~~~~~~~~~G~S~l~e~~~~~l~~~~~~~~~~~ 221 (435) T protein:vir:79 142 IHERETNARSVRYGEPKLYKISPGGDIPEFFVHYSRICIIDGERVSNEKRRQNDGWGASILNKRLIEAIVDYNYCQELAT 221 (435) T ss_pred chhhccCCcccccCcceEEEEecCCCCCceEEcceeEEEecCCcchhhhccccCcccchHHHHHHHHHHHHHHHHHHHHH Confidence 4321 11 245554332 3567889999999642 233567899998 578888888888888777 Q ss_pred HHHhccCCCceeEEeCC--CCc-cHHHHHHHHHHHHHhccccccccccccccCccccccccccccchhhHHHHHHHHHHH Q lcl|Aclame:pro 210 RYYKNGSHAGFILYMTD--AAQ-KQEDVDTLREAMKSAKGPGNFRNLFMYAPNGKKDGIQLLPVSEVAAKDEFWNIKNVT 286 (368) Q Consensus 210 ~~f~ng~~p~gil~~~~--~~l-~~e~~~~~k~~~~~~~g~~n~~~~~~l~~~g~~~g~~~~pl~~~~~d~qf~e~~~~~ 286 (368) .++...... ++++++ ..+ +++....+.+.++......+....+++.. .+-+++.++.+..+ +-+..... T Consensus 222 ~l~~~~~~~--v~~~~~l~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~i~~----~~e~~e~~~~~lsg--l~~~~~~~ 293 (435) T protein:vir:79 222 QLLRRKQQA--VWKARDLALMCDDEEGRYAARLRLAQVDDESGVGKAIGIDA----TDEEYEVLNSDVSG--VPEFLQEK 293 (435) T ss_pred HHHHHhcCc--cccchhHHHhhcCccchHHHHHHHHHHHHhcCCCCceeEec----CCcceEEEecccCC--HHHHHHHH Confidence 765433322 334332 111 22223333334433222222222333322 11245555544433 45566777 Q ss_pred HHHHHHHhCCChHHh-cccccccccc-cCHHHHHHHHHHH-------HHHHHHHHHHHHHhhcCcceEeechhhhhcCCh Q lcl|Aclame:pro 287 RDDQLAAHRVPPQLM-GIIPNNTGGF-GDVEKAAMVFARN-------EVKPLQDRLLAINDWIGDEVVRFAPYALGGHDQ 357 (368) Q Consensus 287 ~~~Ia~~fgVPp~~l-g~~~~~~~~~-sn~e~~~~~f~~~-------tl~P~~~~ie~l~~~l~~~~~~F~~~~Llr~D~ 357 (368) .++||.+.+||..+| |...+ +. ++.+.....|+.. .+.|.+.++-.+.-+ .++ +.|.+..|...|. T Consensus 294 ~~~iaaa~~IP~t~L~G~s~~---glnstgd~d~~~yyd~i~~~Qe~~l~p~l~~l~~li~~-s~d-~~~~f~pL~~~se 368 (435) T protein:vir:79 294 IDRIVALTGIHEIIIKNKNTG---GVSASQNTALETFYKLIDRKRVEDYKPILEFLLPFMIS-ETE-WSIEFEPLSVPSD 368 (435) T ss_pred HHHHHhhhCCCeeeeccCCcc---ccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CCC-CeEEeCCCCCCCH Confidence 889999999999776 54432 22 3445566666653 356665554433211 122 3444456999999 Q ss_pred hhhhhhhhhcC Q lcl|Aclame:pro 358 PAAAPGGQRSA 368 (368) Q Consensus 358 ~~ra~~~~~~~ 368 (368) +.+|+...+-| T Consensus 369 kEkAei~~~~a 379 (435) T protein:vir:79 369 KDKAEIMAKNV 379 (435) T ss_pred HHHHHHHHHHH Confidence 99988766665 No 108 >protein:vir:104338 Length: 422 # NCBI annotation: putative portal protein # Family: family:all:297 # MgeID: mge:1593 # MgeName: RTP # Cross-refs: genbank:acc:YP_398967;genbank:gi:81343951;genbank:GeneID:3778870 Probab=99.33 E-value=5.2e-13 Score=87.94 Aligned_cols=325 Identities=10% Similarity=-0.008 Sum_probs=159.6 Q ss_pred CCcCCCCccccccccccccccCCCcchhhccccCceEEEECCCceeccChHHHHHHHHHHhccchhcccccHHHHHHHHH Q lcl|Aclame:pro 1 MSRNKTRRAARAASAHVRTANTDAPTEHHTDRAAQAEVFSFGDPVEVLDRRELLDYVECMRMGQWYEPPMPWDGLARSFR 80 (368) Q Consensus 1 m~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~r 80 (368) |- ..+...-+......... .++.|.+. +.. .+..+++.+ ++....++...+ T Consensus 1 ~~------------------~~D~~~n~~~gg~~~~~--~~~~~~~~-~~~---~l~a~Y~~~-----~l~~~~Vd~~ae 51 (422) T protein:vir:10 1 MV------------------KTDSYANIFLGGSDGSE--IYGSLQNQ-APT---ILASLYADN-----ALVRRIIDTIPE 51 (422) T ss_pred Cc------------------cchhhHHHHcCCCCCcc--ccCccccc-CHH---HHHHHHHhC-----hhhHHHHhhhhH Confidence 21 11111111111111111 13444332 222 122222222 222222222111 Q ss_pred hcccccchhhhccchHHhhccCCCCcCHHHHHHHHHhHhhhCCeeEEEEe-c---------CCcceEEEEEecccccccc Q lcl|Aclame:pro 81 AAAHHSSAVYVKRNILVSTFIPHPLLSRATFERLVLDWQVFGNAYLERRE-N---------VLGGTIRLDTPLAKYVRRG 150 (368) Q Consensus 81 ~~~~~~~~~~~~~~~~l~~~~~n~~~~~~~~~~~~~~~ll~Gnay~~i~r-~---------~~G~~~~L~~l~p~~v~~~ 150 (368) -....+..+.-+.+...........--..-+...+...-++|.+++.+.. + ..|.+..|.++++..+++. T Consensus 52 d~~r~g~~i~~~~~~~~~~~~~~~l~~~~~l~~a~~~~rl~G~a~i~i~v~d~~~~~~Pl~~~g~~~~l~v~d~~~i~~~ 131 (422) T protein:vir:10 52 TALAAGFHIDGIDDEPAFWSRWDDLEMTQNINDAWSWARLFGGAAIVAIVKDNRALTSPVREGAELETVRVYDRTQVKVQ 131 (422) T ss_pred HHhcCCccccCCCHHHHHHHHHHHhhHHHHHHHHHHhhccccceEEEEEecCCCCccccccccCceeeEEeeccccccch Confidence 11111111111111100000000011123334445555689999999874 2 2356778889988887653 Q ss_pred cC-----CC-----eeEEEeCC--ceEEEEcCccEEEecCCC------CcCCccccchhhH-HHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 151 LD-----LN-----TYFFVQNW--QQPYTFAAGSVFHLQEPD------INQEVYGLPEYLS-ALNATWLNESATLFRRRY 211 (368) Q Consensus 151 ~~-----~~-----~~~~~~~~--~~~~~~~~~dviH~r~~~------~~~~~~G~spi~~-a~~~i~~~~~a~~~~~~~ 211 (368) .. .. .+|.+..+ +..+.+.++.||||.+.. +...++|.|+++. +.+.|.....+......+ T Consensus 132 ~~~~dp~s~~fg~P~~y~v~~~~~~~~~~iH~SRli~~~g~~~p~~~~~~~~~~G~S~l~~~~~~~i~~~~~~~~~~~~l 211 (422) T protein:vir:10 132 TREENPRNARFGEPLTYRITTNESDMFYDVHYSRIHIIDGERIPNVMRRQNDGWGRSVLSSDILDSIKDYTNCERLATQL 211 (422) T ss_pred hcccCccccccCcceEEEEecCCCCcceeeccceeEEeCCCCchhhhcccCCcccchhHHHHHHHHHHHHHHHHHHHHHH Confidence 21 11 24555443 234678889999996532 3456789999986 678888887777777776 Q ss_pred HhccCCCceeEEeCC--CCc-cHHHHHHHHHHHHHhc-cccccccccccccCccccccccccccchhhHHHHHHHHHHHH Q lcl|Aclame:pro 212 YKNGSHAGFILYMTD--AAQ-KQEDVDTLREAMKSAK-GPGNFRNLFMYAPNGKKDGIQLLPVSEVAAKDEFWNIKNVTR 287 (368) Q Consensus 212 f~ng~~p~gil~~~~--~~l-~~e~~~~~k~~~~~~~-g~~n~~~~~~l~~~g~~~g~~~~pl~~~~~d~qf~e~~~~~~ 287 (368) +...... ++++++ ..+ +.+....++++++... ..+|.+. +++.. .+-+|+.++.+..+ +-+...... T Consensus 212 ~~~~~~~--v~~~~~l~~~~~~~~~~~~~~~r~~~~~~~~~~~~~-~~l~~----~~e~~e~~~~~lsg--l~~~~~~~~ 282 (422) T protein:vir:10 212 LKRKQQA--VWKAKGLAELCDDSEGFGAARLRLAQVDNNSGVGQA-IGIDA----ESEEYSVLNSDIGG--IDAFLDKKF 282 (422) T ss_pred HHHhccc--cccchhHHHhcCCccchHHHHHHHHHHHHhcCCccc-eeEec----CCcceEEEecccCC--hHHHHHHHH Confidence 6443322 344432 111 2223333444444322 1223333 33332 22346666555544 456677788 Q ss_pred HHHHHHhCCChHHh-cccccccccc-cCHHHHHHHHHHH-------HHHHHHHHHHHHHhhcCcceEeechhhhhcCChh Q lcl|Aclame:pro 288 DDQLAAHRVPPQLM-GIIPNNTGGF-GDVEKAAMVFARN-------EVKPLQDRLLAINDWIGDEVVRFAPYALGGHDQP 358 (368) Q Consensus 288 ~~Ia~~fgVPp~~l-g~~~~~~~~~-sn~e~~~~~f~~~-------tl~P~~~~ie~l~~~l~~~~~~F~~~~Llr~D~~ 358 (368) ++||++.+||..+| |... ++. ++.+...+.|+.. .|.|.+.++-.+.- .++-+.|.+..|...|.+ T Consensus 283 ~~iaaa~~IP~t~L~G~s~---~Glnatgd~d~~~yyd~i~~~Qe~~l~p~l~~l~~~i~--~s~~~~~~f~pL~~~sek 357 (422) T protein:vir:10 283 DRIVALSGIHEIILKNKNV---GGVSSSQNTALETFHKLVDRKRNAELLPILEFLIPFIV--NAEEWSVEFNPLAQESSK 357 (422) T ss_pred HHHHhhhCCCeeeeccCCc---ccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc--ccCCcEEEeCCCCCCCHH Confidence 99999999999877 5433 233 3445566666653 45665554433221 122244445588899999 Q ss_pred hhhhhhhhcC Q lcl|Aclame:pro 359 AAAPGGQRSA 368 (368) Q Consensus 359 ~ra~~~~~~~ 368 (368) .+|+...+-| T Consensus 358 ekaei~~~~a 367 (422) T protein:vir:10 358 DKAEILEKNV 367 (422) T ss_pred HHHHHHHHHH Confidence 9999766666 No 109 >protein:vir:79511 Length: 448 # NCBI annotation: portal protein # Family: family:all:2372 # MgeID: mge:1870 # MgeName: P74-26 # Cross-refs: genbank:acc:YP_001468055;genbank:gi:157265497;genbank:GeneID:5600628 Probab=99.33 E-value=9.4e-13 Score=86.51 Aligned_cols=351 Identities=9% Similarity=-0.047 Sum_probs=162.3 Q ss_pred CCcCCCCccccccccccccccCCCcchhhccc---cCceEEEECCCceeccChHHHHHHHHHHhccchhcccccHHHHHH Q lcl|Aclame:pro 1 MSRNKTRRAARAASAHVRTANTDAPTEHHTDR---AAQAEVFSFGDPVEVLDRRELLDYVECMRMGQWYEPPMPWDGLAR 77 (368) Q Consensus 1 m~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~ 77 (368) |+||++|.+..... +....+.+++....... ..+..-.+..++-++|..+..+..+.-+.....+..-+..+.+.. T Consensus 1 m~k~~~k~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~iLr~~~~~~ly~~m~~D~hi~s~l~~Rk~av 79 (448) T protein:vir:79 1 MAKRGRKPKELVPG-PGSIDPSDVPKLEGASVPVMSTSYDVVVDREFDELLQGKDGLLVYHKMLSDGTVKNALNYIFGRI 79 (448) T ss_pred CCCCCCCCccccCc-ccccccccchhhhhhhhhhcccccccccccchhHhhccccchHHHHHHhhChHHHHHHHHHHHHH Confidence 99988876553222 11111222211110000 000011111112233322111111111111111111111000000 Q ss_pred H---HHhcccccchhhhccchHHhhccCCC-----CcCHHHHHHHHHhHhhhCCeeEEEEec--CCcc--eEEEEEeccc Q lcl|Aclame:pro 78 S---FRAAAHHSSAVYVKRNILVSTFIPHP-----LLSRATFERLVLDWQVFGNAYLERREN--VLGG--TIRLDTPLAK 145 (368) Q Consensus 78 ~---~r~~~~~~~~~~~~~~~~l~~~~~n~-----~~~~~~~~~~~~~~ll~Gnay~~i~r~--~~G~--~~~L~~l~p~ 145 (368) . .+..+........+.-..+......+ ...+..+-.-+++.+++|-++.+|++. .+|. +..|.+.++. T Consensus 80 ~~~~w~v~p~~~~~~~~~~ae~v~~~l~~~~~~~~~~~f~~~~~~~lda~~~G~s~~Eivw~~~~~g~~~~~~l~~r~~~ 159 (448) T protein:vir:79 80 RSAKWYVEPASTDPEDIAIAAFIHAQLGIDDASVGKYPFGRLFAIYENAYIYGMAAGEIVLTLGADGKLILDKIVPIHPF 159 (448) T ss_pred hcCCceEecCCCCHHHHHHHHHHHHHhhhhhhhhccCCHHHHHHHHHHhhhhcceeEEEEeeecCCCceecccccccCCc Confidence 0 00000000000000000011111111 112222223355678999999999864 3454 4567777776 Q ss_pred cc---ccccCCCeeEEEeCC--------ceEEEEcCccEEEecCCCCcCCccccchhhHHHHHHHHHHHHHHHHHHHHhc Q lcl|Aclame:pro 146 YV---RRGLDLNTYFFVQNW--------QQPYTFAAGSVFHLQEPDINQEVYGLPEYLSALNATWLNESATLFRRRYYKN 214 (368) Q Consensus 146 ~v---~~~~~~~~~~~~~~~--------~~~~~~~~~dviH~r~~~~~~~~~G~spi~~a~~~i~~~~~a~~~~~~~f~n 214 (368) ++ ....++...+....+ .....++.+-++|.... ..+..||.+.+..+.-....-....++...|... T Consensus 160 ~~~~f~~~~d~~l~~~~~~~~~~~~~~~~~~~~lP~~~~i~~~~~-~~g~p~g~gLlr~~~w~~~fK~~~~~~w~~f~E~ 238 (448) T protein:vir:79 160 NIDEVLYDEEGGPKALKLSGEVKGGSQFVSGLEIPIWKTVVFLHN-DDGSFTGQSALRAAVPHWLAKRALILLINHGLER 238 (448) T ss_pred cccceeeecCCceEEeecCCcccccccCCCccccccceEEEEecC-ccCCcccchhHHHHHHHHHHHHHHHHHHHHHHHH Confidence 43 334443333322221 23345677788888754 3456899999999999999999999999999999 Q ss_pred cCCCceeEEeCCC-CccHHHHHHHHHHHHHhccccccccccccccCccccccccccccchhhHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 215 GSHAGFILYMTDA-AQKQEDVDTLREAMKSAKGPGNFRNLFMYAPNGKKDGIQLLPVSEVAAKDEFWNIKNVTRDDQLAA 293 (368) Q Consensus 215 g~~p~gil~~~~~-~l~~e~~~~~k~~~~~~~g~~n~~~~~~l~~~g~~~g~~~~pl~~~~~d~qf~e~~~~~~~~Ia~~ 293 (368) -++|--|.+.+.+ .-++++++.+.+...+..++.+++.+ + +.+ ..+++...+ ..-..+.+.-++.-++|+.+ T Consensus 239 yG~P~~vgky~~ga~~~~~~~~~l~~av~~i~~g~~a~~i--i-P~~--~~ie~~ea~--~~~~~~~~~i~~~d~~Isk~ 311 (448) T protein:vir:79 239 FMIGVPTLTIPKSVRQGTKQWEAAKEIVKNFVQKPRHGII--L-PDD--WKFDTVDLK--SAMPDAIPYLTYHDAGIARA 311 (448) T ss_pred cCCceEEEecCCCCCcCHHHHHHHHHHHHHHhcCCceEEE--e-cCC--ceEEEEecC--CCcccHHHHHHHHHHHHHHH Confidence 9998888887643 23467777777777776655565533 2 222 234444433 33344667778888888887 Q ss_pred hCCChHHhcccc---cccccccCHHHHHHHHHHHHHHHHHHHHHH-HHhhcCcc-------------eEeechhhhhcCC Q lcl|Aclame:pro 294 HRVPPQLMGIIP---NNTGGFGDVEKAAMVFARNEVKPLQDRLLA-INDWIGDE-------------VVRFAPYALGGHD 356 (368) Q Consensus 294 fgVPp~~lg~~~---~~~~~~sn~e~~~~~f~~~tl~P~~~~ie~-l~~~l~~~-------------~~~F~~~~Llr~D 356 (368) . ||..- .++++++...+.......+.+.-.++.|++ +|+.|.+. .++|+.. ..-| T Consensus 312 i------LGqtlTs~~~~g~~~~~~~~~~~v~~~~~~aDa~~i~~tln~~li~~l~~lNfg~~~~~P~~~f~~~--e~~D 383 (448) T protein:vir:79 312 L------GIDFNTVQLNMGVQAINIGEFVSLTQQTIISLQREFASAVNLYLIPKLVLPNWPSATRFPRLTFEME--ERND 383 (448) T ss_pred H------hhhhhccccccchhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcCCCcEEEecCC--ChHH Confidence 6 44321 111222222222222233444445555543 55433221 2444422 2235 Q ss_pred hhhhhhhhhhcC Q lcl|Aclame:pro 357 QPAAAPGGQRSA 368 (368) Q Consensus 357 ~~~ra~~~~~~~ 368 (368) .++.|++-.+-+ T Consensus 384 l~~~a~~~~~l~ 395 (448) T protein:vir:79 384 FSAAANLMGMLI 395 (448) T ss_pred HHHHHHHhhhhh Confidence 455555444333 No 110 >protein:vir:94049 Length: 532 # NCBI annotation: hypothetical protein # Family: family:all:297 # MgeID: mge:1493 # MgeName: OP2 # Cross-refs: genbank:acc:YP_453629;genbank:gi:84662665;genbank:GeneID:5142559 Probab=99.29 E-value=1.4e-12 Score=85.51 Aligned_cols=347 Identities=12% Similarity=0.060 Sum_probs=162.3 Q ss_pred CCcCCCCccccccccccccccC-CCcchhhcc---------ccC--ceEEEECCCceeccChHHHHHHHHHHhccchhcc Q lcl|Aclame:pro 1 MSRNKTRRAARAASAHVRTANT-DAPTEHHTD---------RAA--QAEVFSFGDPVEVLDRRELLDYVECMRMGQWYEP 68 (368) Q Consensus 1 m~~~k~~~~~~~~~~~~~~~~~-~~~~~~~~~---------~~~--~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~ 68 (368) =+||+.+.....+++|.--.+. .+...+... ..+ +...+.++.+..+ +...++ .+++.+.++.. T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~g~~~~~~~~~~~~~~~~~~~-~~~~l~---a~Y~~~~l~r~ 99 (532) T protein:vir:94 24 DAKRATHTSLGLATAHEIDPTAYSPYERNAAQNAMAMDYGLQTGRNGRNALSFVEATSW-PGFPTL---ALLAQLPEYRT 99 (532) T ss_pred hhhhhhhhhhhhhhhhhhcccccccccccccccccccccccCccccccccccccccccc-chHHHH---HHHHcCchhhh Confidence 2222222222233332211100 000001000 000 0011112222221 111111 11111111111 Q ss_pred cccHHHHHHHHHhccc----ccchhhhccchHHhhccCCCCcCHHHHHHHHHhHhhhCCeeEEEEecC------------ Q lcl|Aclame:pro 69 PMPWDGLARSFRAAAH----HSSAVYVKRNILVSTFIPHPLLSRATFERLVLDWQVFGNAYLERRENV------------ 132 (368) Q Consensus 69 p~~~~~l~~~~r~~~~----~~~~~~~~~~~~l~~~~~n~~~~~~~~~~~~~~~ll~Gnay~~i~r~~------------ 132 (368) -|..- ...+.|..-. .+..+..+ ....+.......-....+...+...-++|.+++++...+ T Consensus 100 ~Vd~~-aed~~r~~~~i~~~~~~~~~~~-~~~~i~~~~~~l~v~~~l~~a~~~~rlyG~a~i~i~v~~~~~~~~~~~p~~ 177 (532) T protein:vir:94 100 MHETP-ADECVRAWGKITCSSKDELAAD-KATRITQKLEQYNVRTLVRTVVIHDQAYGGAHVFPHLKMDGDSVPADAPLL 177 (532) T ss_pred hhccc-hHHHhhCCceEeeCCccccchH-HHHHHHHHHHhhhHHHHHHHHHHhhhcccceEEEEEeccCCcccccccccc Confidence 11110 0112221110 00000000 000000000001011223334444568999998875432 Q ss_pred -------CcceEEEEEecccccccccCC--C----e-----eEEEeCCceEEEEcCccEEEecCCCCc------CCcccc Q lcl|Aclame:pro 133 -------LGGTIRLDTPLAKYVRRGLDL--N----T-----YFFVQNWQQPYTFAAGSVFHLQEPDIN------QEVYGL 188 (368) Q Consensus 133 -------~G~~~~L~~l~p~~v~~~~~~--~----~-----~~~~~~~~~~~~~~~~dviH~r~~~~~------~~~~G~ 188 (368) .|.+++|.+++|..|.+.... + . +|.+.. + ..+.++.||||.+.... .+++|+ T Consensus 178 l~~~~I~~g~~~~l~vld~~~v~p~~~~~~dp~sp~fg~P~~y~v~~-g--~~iH~SRli~f~g~~~p~~~~~~~~~~G~ 254 (532) T protein:vir:94 178 LSPSFVQRGCLIGFATIEPMWLSPNAYNATDPTLPSFYKPDSWIATS-G--KKIHSSRIHTVVGRPVGDMLKAAYSFRGV 254 (532) T ss_pred ccccccccceeeEEEeechheecccccccccccccccCCceeEEEcc-C--eeeccceEEEecCCCchhhhccccccccc Confidence 234568889998887654221 1 1 333332 2 36788999999754322 355799 Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHhccCCCceeEEeC-CCCccHHHHHHHHHHHHHhc-cccccccccccccCccccccc Q lcl|Aclame:pro 189 PEYLSALNATWLNESATLFRRRYYKNGSHAGFILYMT-DAAQKQEDVDTLREAMKSAK-GPGNFRNLFMYAPNGKKDGIQ 266 (368) Q Consensus 189 spi~~a~~~i~~~~~a~~~~~~~f~ng~~p~gil~~~-~~~l~~e~~~~~k~~~~~~~-g~~n~~~~~~l~~~g~~~g~~ 266 (368) |.++.+.+.|.....+......+....... ++++. ...++.+..+.+.+.++... +.+|.+ ++++..+ +-+ T Consensus 255 Svlq~~~~~l~~~~~t~~~~~~l~~~~~~~--v~k~~~a~~ls~~~~~~~~~r~~~~~~~~~n~g-~~~id~~----~e~ 327 (532) T protein:vir:94 255 SISQLAMPYVDNWLRTRQSVSDTVKQFSMT--NLATDMAQLLAPGGAQSLDARLQLFNLYRDNRN-IGALDKG----TEE 327 (532) T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHhcCCc--eeeechHHhhcchhHHHHHHHHHHHHhhcCCcc-ceEEcCC----Cce Confidence 999999999998888887777765543332 23332 12356666777777776543 334443 3444321 124 Q ss_pred cccccchhhHHHHHHHHHHHHHHHHHHhCCChHHh-cccccccccc-cCHHHHHHHHHH-------HHHHHHHHHHHHHH Q lcl|Aclame:pro 267 LLPVSEVAAKDEFWNIKNVTRDDQLAAHRVPPQLM-GIIPNNTGGF-GDVEKAAMVFAR-------NEVKPLQDRLLAIN 337 (368) Q Consensus 267 ~~pl~~~~~d~qf~e~~~~~~~~Ia~~fgVPp~~l-g~~~~~~~~~-sn~e~~~~~f~~-------~tl~P~~~~ie~l~ 337 (368) |+.++.+..+ +-+......++||.+.|||...| |...+ ++ ++.+.....|+. ..|.|.+++|-++. T Consensus 328 ~e~~~~~lsg--l~~~l~~~~~~iAaa~~IP~t~LfG~sp~---GlnstGe~D~~~yyd~I~s~Qe~~l~p~le~l~~~l 402 (532) T protein:vir:94 328 IQQTNTPLSG--LDSLQAQSQEQMAAVSHIPLVKLLGITPN---GLNASSDGEIRVWYDFIAGYQATNLTPLMEWIIDLI 402 (532) T ss_pred eEEEecccCC--HHHHHHHHHHHHHhHhCCCeeeeecCCcc---cccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Confidence 5555444333 34456677789999999999865 64332 23 334555566655 34778877765432 Q ss_pred -hh-cCc--ceEeechhhhhcCChhhhhhhhhhcC Q lcl|Aclame:pro 338 -DW-IGD--EVVRFAPYALGGHDQPAAAPGGQRSA 368 (368) Q Consensus 338 -~~-l~~--~~~~F~~~~Llr~D~~~ra~~~~~~~ 368 (368) +. ++. .-+.|.+..|...|.+.+|+...+-| T Consensus 403 ~~s~~g~~~~d~~~~f~pL~~~s~kEkAei~~~~a 437 (532) T protein:vir:94 403 QLSEYGQIDPGLAWEWSPLMELDDKELAEVRQLNA 437 (532) T ss_pred HHHhcCCCCCCceEEeCCCCCCCHHHHHHHHHHHH Confidence 21 221 12444445699999999998765555 No 111 >protein:vir:80040 Length: 461 # NCBI annotation: gp3 # Family: family:all:297 # MgeID: mge:1876 # MgeName: B054 # Cross-refs: genbank:acc:YP_001468707;genbank:gi:157325287;genbank:GeneID:5601731 Probab=99.26 E-value=3.6e-12 Score=83.31 Aligned_cols=338 Identities=13% Similarity=0.064 Sum_probs=171.2 Q ss_pred CCcCCCCccccccc---cccccccCCCcchhhccccCce-EEEECCCceeccChHHHHHHHHHHhccchhcccccHHHHH Q lcl|Aclame:pro 1 MSRNKTRRAARAAS---AHVRTANTDAPTEHHTDRAAQA-EVFSFGDPVEVLDRRELLDYVECMRMGQWYEPPMPWDGLA 76 (368) Q Consensus 1 m~~~k~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~ 76 (368) |+++.+.+..+..+ ....-.-.-+ . +..... ..-.++.|..+ +. ..|..+++.+.++..-|+. ... T Consensus 1 ~~~~~~a~~~~~~~~a~~~~~~~~~~g-~----~~~~d~~~~~~~~~~~~~-~~---~~l~~lY~~~~l~r~iVd~-~a~ 70 (461) T protein:vir:80 1 MYSIDKAKQAKIDSKIVNRNDFMVGHG-K----ANSRDKLTRQTPGNGQKL-DL---KACENLYASNSIAMNIVDI-ISE 70 (461) T ss_pred CccchhhhhhhhhhhhhhhhHHHhhcC-C----cchhhhhhccccCccccc-CH---HHHHHHHHhCCccchhhcc-chH Confidence 99886544332221 1111000000 0 000001 11123334322 22 1222233322222222221 112 Q ss_pred HHHHhcccccchhhhccch---HHhhccCCCCcCHHHHHHHHHhHhhhCCeeEEEEe-cCC------------c---ceE Q lcl|Aclame:pro 77 RSFRAAAHHSSAVYVKRNI---LVSTFIPHPLLSRATFERLVLDWQVFGNAYLERRE-NVL------------G---GTI 137 (368) Q Consensus 77 ~~~r~~~~~~~~~~~~~~~---~l~~~~~n~~~~~~~~~~~~~~~ll~Gnay~~i~r-~~~------------G---~~~ 137 (368) .+.|.-. .+..+.+. .+... .+..-...-+...+....++|.+|++|.- +.. + .+. T Consensus 71 d~~r~g~----~i~~~~~~~~~~~~~~-~~~l~~~~~l~~~~~~~rl~G~a~i~i~v~d~~~~~~~~~~pl~~~~~~~~~ 145 (461) T protein:vir:80 71 DMVRAGW----SLKTDNKEMKKNIESK-WRKLKTKDRFQKLYADKRLYGDGFLSIGVVSSNREQADLSTAIDPKTIKSIP 145 (461) T ss_pred HhhcCCe----eeecCCHHHHHHHHHH-HHHhhHHHHHHHHHHhhcccccEEEEEEeecCCccccCccCCccccccccee Confidence 2333211 11111110 01000 00001123344555667799999999853 211 1 222 Q ss_pred EEEEeccccccccc---C--CC-----eeEEEeC-------------CceEEEEcCccEEEecCCCCcCCccccchhhHH Q lcl|Aclame:pro 138 RLDTPLAKYVRRGL---D--LN-----TYFFVQN-------------WQQPYTFAAGSVFHLQEPDINQEVYGLPEYLSA 194 (368) Q Consensus 138 ~L~~l~p~~v~~~~---~--~~-----~~~~~~~-------------~~~~~~~~~~dviH~r~~~~~~~~~G~spi~~a 194 (368) .|.|+.+..+.... + .. .+|.+.. +...+.+.+..||||.+....+..+|.|.++.+ T Consensus 146 ~l~~~~~~~i~~~~~~~dp~sp~fg~P~~y~i~~~~~~~~~~~~~~~~~~~~~iH~SRii~~~~~~~~~~~~G~S~le~~ 225 (461) T protein:vir:80 146 YINTFNTQKVTQLYLNQDMFSEHFGEVEFFEVNRVSQLGEEILSGTTASTSEQIHRSRIIHEQGLRFEGETKGRSIFESL 225 (461) T ss_pred EEEeccccccchhhhcccCcCcccccceEEEEeccccccccccccccCccceEEccccEEEecCCCCCccccCcchHHHH Confidence 34444333332211 1 11 1344432 233577899999999987777888999999999 Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCceeEEeCC-CCccHHHHHHHHHHHHHhccccccccccccccCccccccccccccch Q lcl|Aclame:pro 195 LNATWLNESATLFRRRYYKNGSHAGFILYMTD-AAQKQEDVDTLREAMKSAKGPGNFRNLFMYAPNGKKDGIQLLPVSEV 273 (368) Q Consensus 195 ~~~i~~~~~a~~~~~~~f~ng~~p~gil~~~~-~~l~~e~~~~~k~~~~~~~g~~n~~~~~~l~~~g~~~g~~~~pl~~~ 273 (368) .+.|.....+......+..+...+ ++++++ ..+..+....+.+.++..++ |-+ .+++.. ++ +++.++.+ T Consensus 226 ~~~l~~~~~~~~~~~~l~~~~~~~--v~k~~~l~~~~~~~~~~~~~~~~~~~~--~~g-~~~~d~---~e--~~e~~~~~ 295 (461) T protein:vir:80 226 YDIITVMDTSLWSVGQILYDFAFK--VYKTDDIDALNKDDKANLTAMLDFMFR--TEA-LAIIKG---DE--QLTKESTN 295 (461) T ss_pred HHHHHHHHHHHHHHHHHHHHhCCC--ceecchHHhhhchHHHHHHHHHHHhcC--Cce-EEEEcC---Cc--ceEEEecC Confidence 999998888888888877765443 455543 12334455556666665543 222 344422 22 35555544 Q ss_pred hhHHHHHHHHHHHHHHHHHHhCCChHHh-cccccccccccCHHHHHHHHHHH-------HHHHHHHHHHHHH-hh-cC-- Q lcl|Aclame:pro 274 AAKDEFWNIKNVTRDDQLAAHRVPPQLM-GIIPNNTGGFGDVEKAAMVFARN-------EVKPLQDRLLAIN-DW-IG-- 341 (368) Q Consensus 274 ~~d~qf~e~~~~~~~~Ia~~fgVPp~~l-g~~~~~~~~~sn~e~~~~~f~~~-------tl~P~~~~ie~l~-~~-l~-- 341 (368) ..+ +-+........||.+-+||..+| |... +..++.+...+.|+.. .+.|+++++.++- +. ++ T Consensus 296 lsg--l~~~l~~~~~~iaa~s~iP~t~L~G~s~---g~~asge~D~~~yyd~i~~~qe~~l~p~le~l~~~i~~s~~~~~ 370 (461) T protein:vir:80 296 VSG--MKDLLDYGWDYLAGAVRMPKTVLKGQEA---GTLTGAQYDVMNYYARVSSIQENRLRPQLEYLTRLLMWASDDCG 370 (461) T ss_pred cCC--HHHHHHHHHHHHhhhhcCCeeeeecccC---CccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc Confidence 433 34667788889999999999876 5432 3445666666666543 4667766655421 11 11 Q ss_pred ----c--ceEeechhhhhcCChhhhhhhhhhcC Q lcl|Aclame:pro 342 ----D--EVVRFAPYALGGHDQPAAAPGGQRSA 368 (368) Q Consensus 342 ----~--~~~~F~~~~Llr~D~~~ra~~~~~~~ 368 (368) + .-++|.+..|...|.+.+|+...+-| T Consensus 371 ~~~~p~~~~~~i~f~~L~~~s~kekAe~~~~~a 403 (461) T protein:vir:80 371 PSIDPDSFEWAIEFNPLWNLDSKTDAEVRKLTA 403 (461) T ss_pred cccCccccceEEEeCCCCCCCHHHHHHHHHHHH Confidence 1 13567777999999999999766555 No 112 >protein:vir:107742 Length: 537 # NCBI annotation: gp28 # Family: family:all:297 # MgeID: mge:1520 # MgeName: BcepB1A # Cross-refs: genbank:acc:YP_024875;genbank:gi:48697517;genbank:GeneID:2948359 Probab=99.26 E-value=5.4e-12 Score=82.35 Aligned_cols=348 Identities=9% Similarity=0.033 Sum_probs=154.6 Q ss_pred CCcC----CCCccccccccccccccCCCcchhhccc-cCceEEEE-CCCceeccChHHHHHHHHHH-hc--cc-hhcccc Q lcl|Aclame:pro 1 MSRN----KTRRAARAASAHVRTANTDAPTEHHTDR-AAQAEVFS-FGDPVEVLDRRELLDYVECM-RM--GQ-WYEPPM 70 (368) Q Consensus 1 m~~~----k~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~g~p~~~~~~~~~~~~~~~~-~~--~~-~~~~p~ 70 (368) |+.. +.+...++...+.+......+....... .++..+++ -+.+... ++...+.... .+ .+ ++..-+ T Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~d~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 101 (537) T protein:vir:10 25 VGIFGAGDDEKPFTRAQLVHQTMMAIRDHAIAMMPKVDGSHPDMAMDGLDVEG---GTFSAYANPNLSEGLVLWYAQQAF 101 (537) T ss_pred cCCCcccchhhHHHHHHhhhhccCCCCCccCcccccccccccchhccccccch---hhhhhhccccccchhhhhccccCC Confidence 2211 1111111111111111110000000000 00000000 0000000 0000000000 00 00 111111 Q ss_pred cHHHHHHHHHhcccccchhhhccchH---------------------HhhccCCCCcCHHHHHHHHHhHhhhCCeeEEEE Q lcl|Aclame:pro 71 PWDGLARSFRAAAHHSSAVYVKRNIL---------------------VSTFIPHPLLSRATFERLVLDWQVFGNAYLERR 129 (368) Q Consensus 71 ~~~~l~~~~r~~~~~~~~~~~~~~~~---------------------l~~~~~n~~~~~~~~~~~~~~~ll~Gnay~~i~ 129 (368) .-+.+..+++.+.-....+..-.... .+....+......-+...+...-++|.++++|. T Consensus 102 ~~~~l~a~Y~~~~l~r~iVd~~A~d~~r~~~~i~~~~~~~~~~~~~~~l~~~~~~l~~~~~l~~a~~~~rlyG~~~i~i~ 181 (537) T protein:vir:10 102 IGHQMCALIATHWLVNKACSQMPRDAMRKGYKIISDDGNELDPKDAKFIDRYDRAFNIKKHAIQFVRKGRIFGIRIALFK 181 (537) T ss_pred ccHHHHHHHHhCchhhhhhhhhhHHhhcCCceeecCCcccccHHHHHHHHHHHHHhhHHHHHHHHHHhcccccceEEEEe Confidence 11222222332221111111000000 000000000111222333344457899998876 Q ss_pred ec-C---------------CcceEEEEEeccccccccc--------CCCe-----eEEEeCCceEEEEcCccEEEecCCC Q lcl|Aclame:pro 130 EN-V---------------LGGTIRLDTPLAKYVRRGL--------DLNT-----YFFVQNWQQPYTFAAGSVFHLQEPD 180 (368) Q Consensus 130 r~-~---------------~G~~~~L~~l~p~~v~~~~--------~~~~-----~~~~~~~~~~~~~~~~dviH~r~~~ 180 (368) -. . .|....|..++|..+.... .... +|.+ .+ ..+.++.||||.+.. T Consensus 182 v~~~D~~~~~~Pl~~~~i~kg~~k~l~vidp~~~~~~~~~~~~~dp~sp~fg~P~~y~v--~g--~~iH~SRli~f~g~~ 257 (537) T protein:vir:10 182 VDSPDPYYYEKPFNIDGVMPGAYKGIVQIDPYWCAPLLDAQASSNPVSMHFYEPTYWLI--NG--KKYHRSHLAIYINDE 257 (537) T ss_pred ecCcCCcccccccccccccccceeEEEEechhhcccccchhhhccCCccccCCceeeee--cC--eEecceeEEEecCCC Confidence 32 1 2345678888887665421 1111 2333 23 467889999997543 Q ss_pred C------cCCccccchhhHHHHHHHHHHHHHHHHHHHHhccCCCceeEEeCC--CCccHHHHHHHHHHHHHhcccccccc Q lcl|Aclame:pro 181 I------NQEVYGLPEYLSALNATWLNESATLFRRRYYKNGSHAGFILYMTD--AAQKQEDVDTLREAMKSAKGPGNFRN 252 (368) Q Consensus 181 ~------~~~~~G~spi~~a~~~i~~~~~a~~~~~~~f~ng~~p~gil~~~~--~~l~~e~~~~~k~~~~~~~g~~n~~~ 252 (368) + ..+++|+|.++.+.+.|.....+......++...... ++++.. ...++++..+.-+.|... .+|.+. T Consensus 258 ~p~~~~~~~~~~G~Svlq~~~~~l~~~~~t~~~~~~l~~~~~~~--v~k~~~~~~l~~~~~~~~r~~~~~~~--r~n~g~ 333 (537) T protein:vir:10 258 VVDFLKPSYIYGGVPLPQQIMERVYAAERTANEGPMLAMTKRQT--VLKVDAAQVLANKQQFDETMSWWTAT--RDNYQV 333 (537) T ss_pred CchhhhcccCcccccHHHHHHHHHHHHHHHHHHHHHHHHhcCCc--eeeechHHhhcCHHHHHHHHHHHHhh--cCCcce Confidence 2 2356799999999999988888887777777655544 333332 122344333322333332 234443 Q ss_pred ccccccCccccccccccccchhhHHHHHHHHHHHHHHHHHHhCCChHHh-cccccccccccCHHHHHHHHHHH------H Q lcl|Aclame:pro 253 LFMYAPNGKKDGIQLLPVSEVAAKDEFWNIKNVTRDDQLAAHRVPPQLM-GIIPNNTGGFGDVEKAAMVFARN------E 325 (368) Q Consensus 253 ~~~l~~~g~~~g~~~~pl~~~~~d~qf~e~~~~~~~~Ia~~fgVPp~~l-g~~~~~~~~~sn~e~~~~~f~~~------t 325 (368) +++... +-+|+.++.+..+ +-+......+.||.+.|||...| |.... +..++.+...+.|+.. . T Consensus 334 -~~id~e----~e~~e~~~~~lsg--l~~~l~~~~~~iAa~~~IP~t~L~G~sp~--GlnatGe~D~~~yyd~I~~~Qe~ 404 (537) T protein:vir:10 334 -RVVDKD----NEDVVQIDTTLND--LDKVIMNQYQLVCAIARTPAPKMLGTVPT--GFNSTGDYEEASYHEECESTQDD 404 (537) T ss_pred -eEecCC----CceeEEEeccCCC--HHHHHHHHHHHHHhhhCCCceeeccCCcc--ccccchhHHHHHHHHHHHHHHHH Confidence 444322 2344444433333 23556677788999999999965 54332 2223445555666533 4 Q ss_pred HHHHHHHHHHHH-h-hcCc-ceEeechhhhhcCChhhhhhhhhhcC Q lcl|Aclame:pro 326 VKPLQDRLLAIN-D-WIGD-EVVRFAPYALGGHDQPAAAPGGQRSA 368 (368) Q Consensus 326 l~P~~~~ie~l~-~-~l~~-~~~~F~~~~Llr~D~~~ra~~~~~~~ 368 (368) |.|.+.++.++- + .++. ..+.|.+..|...|.+.+|+...+-| T Consensus 405 l~p~l~~l~~ll~~~~~~~~~~~~i~f~pL~~~s~kEkAei~~~~a 450 (537) T protein:vir:10 405 MRPLIDRHHQLVCRSHLRKRIRVKVEFPPMDAPKESERADTFLKKM 450 (537) T ss_pred HHHHHHHHHHHHHHhcCCCCcceEEEeCCCCCCCHHHHHHHHHHHH Confidence 788877776532 2 2332 24677788999999999999766655 No 113 >protein:vir:77981 Length: 448 # NCBI annotation: portal protein # Family: family:all:2372 # MgeID: mge:1843 # MgeName: P23-45 # Cross-refs: genbank:acc:YP_001467939;genbank:gi:157265380;genbank:GeneID:5600471 Probab=99.25 E-value=3.2e-12 Score=83.60 Aligned_cols=354 Identities=9% Similarity=-0.036 Sum_probs=161.7 Q ss_pred CCcCCCCccccccccccccccCCCcchh-hcc--ccCceEEEECCCceeccChHHHHHHHHHHhccchhcccccHHHHHH Q lcl|Aclame:pro 1 MSRNKTRRAARAASAHVRTANTDAPTEH-HTD--RAAQAEVFSFGDPVEVLDRRELLDYVECMRMGQWYEPPMPWDGLAR 77 (368) Q Consensus 1 m~~~k~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~ 77 (368) |||+|+|.+.-... +.+..+.+.+.-. ... ...+....+..++-++|.....+..+.-+.....+..-+..+.+.. T Consensus 1 m~kk~~k~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~iLr~~~~~~ly~~m~~D~hi~s~l~~Rk~av 79 (448) T protein:vir:77 1 MAKRGRKPKELVPG-PGSIDPSDVPKLEGASVPVMSTSYDVVVDREFDELLQGKDGLLVYHKMLSDGTVKNALNYIFGRI 79 (448) T ss_pred CCCCCCCCcccCCc-ccccchhhhhhhccchhhhcccccccccccchhHhhccccchHHHHHHhhChHHHHHHHHHHHHH Confidence 99888765542211 1111111111000 000 0000011111122233332211111111111111111111000000 Q ss_pred H---HHhcccccchhhhccchHHhhccCCC-----CcCHHHHHHHHHhHhhhCCeeEEEEec--CCcc--eEEEEEeccc Q lcl|Aclame:pro 78 S---FRAAAHHSSAVYVKRNILVSTFIPHP-----LLSRATFERLVLDWQVFGNAYLERREN--VLGG--TIRLDTPLAK 145 (368) Q Consensus 78 ~---~r~~~~~~~~~~~~~~~~l~~~~~n~-----~~~~~~~~~~~~~~ll~Gnay~~i~r~--~~G~--~~~L~~l~p~ 145 (368) . .+..+........+....+......+ ...++.+-.-+++.+.+|-+..++++. .+|. +..|.+.++. T Consensus 80 ~~~~w~v~p~~~~~~d~~~ae~v~~~l~~~~~~~~~~~f~~~i~~~lda~~~G~s~~Eivw~~~~dg~~~~~~l~~r~~~ 159 (448) T protein:vir:77 80 RSAKWYVEPASTDPEDIAIAAFIHAQLGIDDASVGKYPFGRLFAIYENAYIYGMAAGEIVLTLGADGKLILDKIVPIHPF 159 (448) T ss_pred hcCCceEecCCCCHHHHHHHHHHHHHhhchhhhhccCCHHHHHHHHHHhhhhcceeEEEEEeecCCCceeeccccccCCC Confidence 0 00000000000000000011111111 112222223345778999999999874 3454 4567777775 Q ss_pred ccc---cccCCCeeEEEeCC--------ceEEEEcCccEEEecCCCCcCCccccchhhHHHHHHHHHHHHHHHHHHHHhc Q lcl|Aclame:pro 146 YVR---RGLDLNTYFFVQNW--------QQPYTFAAGSVFHLQEPDINQEVYGLPEYLSALNATWLNESATLFRRRYYKN 214 (368) Q Consensus 146 ~v~---~~~~~~~~~~~~~~--------~~~~~~~~~dviH~r~~~~~~~~~G~spi~~a~~~i~~~~~a~~~~~~~f~n 214 (368) +++ ...++...+....+ .....++.+-++|.+.. ..+..+|.+.+..+.-....-....++...|... T Consensus 160 ~~~~f~~~~~~~l~~~~~~~~~~~~~~~~~~~~lP~~~~i~~~~~-~~g~p~g~gLlr~~~w~~~fK~~~~~~w~~f~E~ 238 (448) T protein:vir:77 160 NIDEVLYDEEGGPKALKLSGEVKGGSQFVNGLEIPIWKTVVFLHN-DDGSFTGQSALRAAVPHWLAKRALILLINHGLER 238 (448) T ss_pred ccceeeeecCCceEEEecCCcccccccCCCccccccceEEEEecC-CcCCcccchHHHHHHHHHHHHHhhHHHHHHHHHH Confidence 443 33333322222211 12345677888888754 3467899999999999999999999999999999 Q ss_pred cCCCceeEEeCCC-CccHHHHHHHHHHHHHhccccccccccccccCccccccccccccchhhHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 215 GSHAGFILYMTDA-AQKQEDVDTLREAMKSAKGPGNFRNLFMYAPNGKKDGIQLLPVSEVAAKDEFWNIKNVTRDDQLAA 293 (368) Q Consensus 215 g~~p~gil~~~~~-~l~~e~~~~~k~~~~~~~g~~n~~~~~~l~~~g~~~g~~~~pl~~~~~d~qf~e~~~~~~~~Ia~~ 293 (368) -++|--|.+++.+ .-++++++.+.+...+..++.+++.+ + +.| ..+++...+- ....+.+.-++.-++|+.+ T Consensus 239 yG~P~~vgky~~ga~~~~~~~~~l~~av~~i~~g~~a~~i--i-P~g--~~ie~~ea~~--~~~~~~~~i~~~d~~Isk~ 311 (448) T protein:vir:77 239 FMIGVPTLTIPKSVRQGTKQWEAAKEIVKNFVQKPRHGII--L-PDD--WKFDTVDLKS--AMPDAIPYLTYHDAGIARA 311 (448) T ss_pred cCCceeEEecCCCCCCCHHHHHHHHHHHHHHhcCCceEEE--e-cCC--ceEEEEecCC--CccCHHHHHHHHHHHHHHH Confidence 9999888887643 23557777777777776555555432 2 222 2344554433 2334567777888889888 Q ss_pred hCCChHHhcccccccccccCHHHHHHHHHHHHHHHHHHHHHH-HHhhcCcc-------------eEeechhhhhcCChhh Q lcl|Aclame:pro 294 HRVPPQLMGIIPNNTGGFGDVEKAAMVFARNEVKPLQDRLLA-INDWIGDE-------------VVRFAPYALGGHDQPA 359 (368) Q Consensus 294 fgVPp~~lg~~~~~~~~~sn~e~~~~~f~~~tl~P~~~~ie~-l~~~l~~~-------------~~~F~~~~Llr~D~~~ 359 (368) ..-. .+ - .+.++++++...+.........+.-.++.|++ +|+.|-+. .+.|+..+ .-|.++ T Consensus 312 iLGq-tl-T-s~~~~g~~~~~~~~~~~v~~~~~~aDa~~i~~tln~~Li~~l~~lNfg~~~~~P~~~f~~~e--~eDl~~ 386 (448) T protein:vir:77 312 LGID-FN-T-VQLNMGVQAVNIGEFVSLTQQTIISLQREFASAVNLYLIPKLVLPNWPGATRFPRLTFEMEE--RNDFSA 386 (448) T ss_pred Hhcc-cc-c-cccccchhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCEEEecCCC--hhhHHH Confidence 7322 11 0 11122222333222222334444455555543 55433111 34554332 235455 Q ss_pred hhhhhhhcC Q lcl|Aclame:pro 360 AAPGGQRSA 368 (368) Q Consensus 360 ra~~~~~~~ 368 (368) .|++-.+-. T Consensus 387 ~a~~~~~l~ 395 (448) T protein:vir:77 387 AANLMGMLI 395 (448) T ss_pred HHHHhHHHH Confidence 554333222 No 114 >protein:vir:107662 Length: 427 # NCBI annotation: putative portal protein # Family: family:all:297 # MgeID: mge:1518 # MgeName: T1 # Cross-refs: genbank:acc:YP_003893;genbank:gi:45686310;genbank:GeneID:2773002 Probab=99.17 E-value=2e-11 Score=79.28 Aligned_cols=326 Identities=9% Similarity=-0.006 Sum_probs=151.0 Q ss_pred ccccccccccccccCCCcchhhccccCceEEEECCCceeccChHHHHHHHHHHhccchhcccccHHHHHHHHHhcccccc Q lcl|Aclame:pro 8 RAARAASAHVRTANTDAPTEHHTDRAAQAEVFSFGDPVEVLDRRELLDYVECMRMGQWYEPPMPWDGLARSFRAAAHHSS 87 (368) Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~r~~~~~~~ 87 (368) .+. -..+... .+.........+ |.. .+.. -.....+++.+.++..-|..-. ..+.|. +. T Consensus 1 ~~~---------~~~d~~~-~~~~~~~~~~~~----~~~-~~~~-~~~l~a~Y~~~~l~~~~Vd~~a-ed~~r~----g~ 59 (427) T protein:vir:10 1 MKI---------VKHDGYN-DIFNGGADGSPK----PFF-MSDA-SYHVGSFYNDNATAKRIVDVIP-EEMVTA----GF 59 (427) T ss_pred CCc---------cccchHH-HHhhcCCCCccc----Ccc-ccCc-hHHHHHHHHcCchhhhhhccch-HHhhcC----Cc Confidence 111 1111111 111100000000 101 1111 0111222222212211111100 111111 11 Q ss_pred hhhhccchHHhhccCCCCcCHHHHHHHHHhHhhhCCeeEEEEe----------cCCcceEEEEEecccccccccCC---- Q lcl|Aclame:pro 88 AVYVKRNILVSTFIPHPLLSRATFERLVLDWQVFGNAYLERRE----------NVLGGTIRLDTPLAKYVRRGLDL---- 153 (368) Q Consensus 88 ~~~~~~~~~l~~~~~n~~~~~~~~~~~~~~~ll~Gnay~~i~r----------~~~G~~~~L~~l~p~~v~~~~~~---- 153 (368) .+.-+.+...........--..-+...+...-++|.+++.+.- +..|.+..|.++++..+++.... T Consensus 60 ~i~g~~~~~~~~~~~~~l~~~~~l~~a~~~~rl~G~a~i~i~v~d~~~l~~p~~~~g~l~~l~v~d~~~~~~~~~~~dp~ 139 (427) T protein:vir:10 60 KMSGVKDEKEFKSLWDSYKLDSSLVDLLCWARLYGGAAMVAIIKDNRMLTSQAKPGAKLEGVRVYDRFAITVEKRVTNAR 139 (427) T ss_pred cccCccHHHHHHHHHHHhhHHHHHHHHHHhccccceeEEEEEecCCCccccccCCCcceeEEEEechhcccccccccCcc Confidence 1111000000000000000112333444455688999998753 23477889999998877653221 Q ss_pred ------CeeEEEeCCc--eEEEEcCccEEEecCCC------CcCCccccchhh-HHHHHHHHHHHHHHHHHHHHhccCCC Q lcl|Aclame:pro 154 ------NTYFFVQNWQ--QPYTFAAGSVFHLQEPD------INQEVYGLPEYL-SALNATWLNESATLFRRRYYKNGSHA 218 (368) Q Consensus 154 ------~~~~~~~~~~--~~~~~~~~dviH~r~~~------~~~~~~G~spi~-~a~~~i~~~~~a~~~~~~~f~ng~~p 218 (368) ..+|.+..++ ..+.+.++.||||.+.. +...++|.|++. .+.+.|.....+......++...... T Consensus 140 s~~fg~P~~y~v~~~~~~~~~~iH~SRli~~~g~~~p~~~~~~~~~~G~S~l~~~~~~~i~~~~~~~~~~~~l~~k~~~~ 219 (427) T protein:vir:10 140 SPRYGEPEIYKVSPGDNMQPYLIHHSRVFIADGERVAQQARKQNQGWGASVLNKSLIDAICDYDYCESLATQILRRKQQA 219 (427) T ss_pred ccccCcceEEEEecCCCCcceEEccccEEEecCCCchhhhcccCCcccchhhhHHHHHHHHHHHHHHHHHHHHHHHhccc Confidence 1245554432 34678899999997542 235678999986 57787877777777766655443222 Q ss_pred ceeEEeCCC--Cc-cHHHHHHHHHHHHHhc-cccccccccccccCccccccccccccchhhHHHHHHHHHHHHHHHHHHh Q lcl|Aclame:pro 219 GFILYMTDA--AQ-KQEDVDTLREAMKSAK-GPGNFRNLFMYAPNGKKDGIQLLPVSEVAAKDEFWNIKNVTRDDQLAAH 294 (368) Q Consensus 219 ~gil~~~~~--~l-~~e~~~~~k~~~~~~~-g~~n~~~~~~l~~~g~~~g~~~~pl~~~~~d~qf~e~~~~~~~~Ia~~f 294 (368) ++++++- .+ +.+....+++.++... ..+|.+.++ +.. .+-+|+.++.+..+ +-+......++||++. T Consensus 220 --v~k~~~l~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~-l~~----~~e~~e~~~~~lsg--l~~~~~~~~~~iaaa~ 290 (427) T protein:vir:10 220 --VWKVKGLAEMCDDDDAQYAARLRLAQVDDNSGVGRAIG-IDA----ETEEYDVLNSDISG--VPEFLSSKMDRIVSLS 290 (427) T ss_pred --cccchhHHHHhcCccchHHHHHHHHHHHHhcCccccee-eec----CCCceeEEecccCC--hHHHHHHHHHHHHhhh Confidence 3444321 11 1122223333343321 122333333 321 12245555444333 3455667788999999 Q ss_pred CCChHHh-cccccccccc-cCHHHHHHHHHH-------HHHHHHHHHHHHHHhhcCcceEeechhhhhcCChhhhhhhhh Q lcl|Aclame:pro 295 RVPPQLM-GIIPNNTGGF-GDVEKAAMVFAR-------NEVKPLQDRLLAINDWIGDEVVRFAPYALGGHDQPAAAPGGQ 365 (368) Q Consensus 295 gVPp~~l-g~~~~~~~~~-sn~e~~~~~f~~-------~tl~P~~~~ie~l~~~l~~~~~~F~~~~Llr~D~~~ra~~~~ 365 (368) +||...| |...+ +. ++.+...+.|+. ..|.|.+.++-++.-+ .+-+.|.+..|...+.+.+|+... T Consensus 291 ~IP~t~L~G~sp~---Glnstgd~D~~nyyd~i~~~Qe~~l~p~l~~l~~~i~~--s~~~~~~f~pL~~~s~kEkaei~~ 365 (427) T protein:vir:10 291 GIHEIIIKNKNVG---GVSASQNTALETFYKLVDRKREEDYRPLLEFLLPFIVD--EEEWSIEFEPLSVPSKKEESEITK 365 (427) T ss_pred CCCeeeeccCCcc---ccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc--CCCcEEEeCCCCCCCHHHHHHHHH Confidence 9999876 54332 33 344556666665 3466666555433221 122344455888899999998766 Q ss_pred hcC Q lcl|Aclame:pro 366 RSA 368 (368) Q Consensus 366 ~~~ 368 (368) +-| T Consensus 366 ~~a 368 (427) T protein:vir:10 366 NNV 368 (427) T ss_pred HHH Confidence 555 No 115 >protein:vir:103860 Length: 528 # NCBI annotation: portal protein # Family: family:all:313 # MgeID: mge:1522 # MgeName: D3112 # Cross-refs: genbank:acc:NP_938234;genbank:gi:38229139;genbank:GeneID:2648175 Probab=99.02 E-value=2.3e-09 Score=67.99 Aligned_cols=339 Identities=12% Similarity=0.006 Sum_probs=174.5 Q ss_pred CCcCCCCccccccccccccccCCCcchhhccccCceEEEECCCceeccChHHHHHHHHHHhccchhcccccHHHHHHHHH Q lcl|Aclame:pro 1 MSRNKTRRAARAASAHVRTANTDAPTEHHTDRAAQAEVFSFGDPVEVLDRRELLDYVECMRMGQWYEPPMPWDGLARSFR 80 (368) Q Consensus 1 m~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~r 80 (368) |++==..--+......... + +.+ ..+.....+ .+.|.+-++...+...+.-...|++... ......+.+ T Consensus 1 ~~~~~d~~g~p~~~~~~~~-~-~~~-----~~~~~~~~~-~~~~~~gltp~~l~~il~~a~~gd~~~~---~~L~~~m~e 69 (528) T protein:vir:10 1 MAAIVDIYGNPLRTQQLRK-Q-QTA-----HLAGLAKEF-ANHPAKGLTPAKLAHILIEAEQGHLQAQ---AELFMDMEE 69 (528) T ss_pred CCeeECCCCCccccccccc-h-hhh-----hhhhhhhhh-cccCCCCCCHHHHHHHHHhhhCCCHHHH---HHHHHHHHh Confidence 7754221111111111100 1 110 011111222 2455555665554444333223332110 011122233 Q ss_pred hcccccchhhhccchHHhh---ccCCCCc----------------CHHHHHHHH---HhHhhhCCeeEEEEecCC---cc Q lcl|Aclame:pro 81 AAAHHSSAVYVKRNILVST---FIPHPLL----------------SRATFERLV---LDWQVFGNAYLERRENVL---GG 135 (368) Q Consensus 81 ~~~~~~~~~~~~~~~~l~~---~~~n~~~----------------~~~~~~~~~---~~~ll~Gnay~~i~r~~~---G~ 135 (368) .+++..+++.......+.. ..|.... ....|+.++ .+.+++|-+..+|++..+ .. T Consensus 70 ~D~~i~s~l~~Rk~av~~~~w~I~p~~~~~~~~~~~a~~v~~~l~~~~~f~~~i~~~lda~~~G~s~~Ei~w~~~~g~~~ 149 (528) T protein:vir:10 70 RDAHLFAEMSKRKRAVLGLDWTIEPPRNASAAEKADAEYLHELLLDLEGIEDLMLDCMDGVGHGYSAIELDWSLQGREWL 149 (528) T ss_pred hChHHHHHHHHHHHHHhcCCceEecCCCCCHHHHHHHHHHHHHHhCCccHHHHHHHHHhhhhhcceeEEEEEeecCCcee Confidence 4444443333222111110 1111110 011244444 455679999999986433 35 Q ss_pred eEEEEEecccccccccCCCeeEEEeCC-ceEEEEcCccEEEecCCCCcCCccccchhhHHHHHHHHHHHHHHHHHHHHhc Q lcl|Aclame:pro 136 TIRLDTPLAKYVRRGLDLNTYFFVQNW-QQPYTFAAGSVFHLQEPDINQEVYGLPEYLSALNATWLNESATLFRRRYYKN 214 (368) Q Consensus 136 ~~~L~~l~p~~v~~~~~~~~~~~~~~~-~~~~~~~~~dviH~r~~~~~~~~~G~spi~~a~~~i~~~~~a~~~~~~~f~n 214 (368) |..+.++++.++.+...+...+....+ .....+++...+..++....+..||.+.+..+.-....-..+.++...|... T Consensus 150 ~~~~~~r~~~~f~~~~~~~~~l~~~~~~~~g~~l~~~k~iv~~~~~~~g~p~g~gLlr~~~w~~~fK~~~~~~w~~f~E~ 229 (528) T protein:vir:10 150 PQAFDHRPQSWFQLNPDDQDELRLRDNSIAGEVLQPFGWIMHKPRSRSGYVARSGLFRVLAWPYLFKHYSTADLAEMLEI 229 (528) T ss_pred EEEeeeecccceeeccCCCcEEeccCCCCCceeecCCCeEEEeecCCCCCccccchHHHHHHHHHHHHhhHHHHHHHHHH Confidence 778999999988887665554444333 3456677766444444444567789999999999999999999999999999 Q ss_pred cCCCceeEEeCCCCccHHHHHHHHHHHHHhccccccccccccccCccccccccccccchhhHHHHHHHHHHHHHHHHHHh Q lcl|Aclame:pro 215 GSHAGFILYMTDAAQKQEDVDTLREAMKSAKGPGNFRNLFMYAPNGKKDGIQLLPVSEVAAKDEFWNIKNVTRDDQLAAH 294 (368) Q Consensus 215 g~~p~gil~~~~~~l~~e~~~~~k~~~~~~~g~~n~~~~~~l~~~g~~~g~~~~pl~~~~~d~qf~e~~~~~~~~Ia~~f 294 (368) -++|--|.+++.. .++++++.+.+.+.+..+ +++ ++ .|.+ ..++++..+... -.-|.+..++..++|+++. T Consensus 230 yG~P~~igky~~~-a~~~ek~~L~~al~~i~~--~~~--~i-iP~~--~~ie~~ea~~~~-~~~f~~li~~~d~~Isk~i 300 (528) T protein:vir:10 230 YGLPIRLGKYPPG-TPDEEKVTLLRAVTGLGH--AAA--GI-IPES--MSIDFQEASKGS-AEPFMAMMRWCDDSMSKAI 300 (528) T ss_pred cCCCeEEEecCCC-CCHHHHHHHHHHHHHHhh--CcE--EE-ecCC--ceeEEeecCCCC-hhHHHHHHHHHHHHHHHHH Confidence 9999989888753 588888888887766532 222 22 2222 446666654332 2458888889999999886 Q ss_pred CCChHHhcccc------cccccccCHHHHHHHHHHHHHHHHHHHHHH-HHhhc---------Cc-----c--eEeechhh Q lcl|Aclame:pro 295 RVPPQLMGIIP------NNTGGFGDVEKAAMVFARNEVKPLQDRLLA-INDWI---------GD-----E--VVRFAPYA 351 (368) Q Consensus 295 gVPp~~lg~~~------~~~~~~sn~e~~~~~f~~~tl~P~~~~ie~-l~~~l---------~~-----~--~~~F~~~~ 351 (368) ||..- +.+++++-.+..+. -..+.+.-.++.|+. +|+.| ++ . .++|+. T Consensus 301 ------LGqtlTs~~~~g~~gS~Alg~vh~~-v~~di~~aDa~~i~~tln~~li~~l~~~N~~~~~~~~~~p~~~~~~-- 371 (528) T protein:vir:10 301 ------LGGTLTSQTSESGGGAYALGQVHNE-VRHDLLAADARQLAATLSRDLLWPLLVLNRSGNLDARRAPRLVFDL-- 371 (528) T ss_pred ------hhhhhhccccccccchhhhHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCccccceEEecC-- Confidence 44322 11123322221111 122223333333332 33322 11 1 234443 Q ss_pred hhcCChhhhhhhhhhcC Q lcl|Aclame:pro 352 LGGHDQPAAAPGGQRSA 368 (368) Q Consensus 352 Llr~D~~~ra~~~~~~~ 368 (368) -..-|.++.|++-.+-+ T Consensus 372 ~e~eDl~~~a~~~~~L~ 388 (528) T protein:vir:10 372 KDRADLAAMATSLPPLV 388 (528) T ss_pred CCcccHHHHHHHHHHHH Confidence 33456666666665554 No 116 >protein:vir:99232 Length: 526 # NCBI annotation: putative portal protein # Family: family:all:313 # MgeID: mge:1649 # MgeName: DMS3 # Cross-refs: genbank:acc:YP_950451;genbank:gi:119953652;genbank:GeneID:4643092 Probab=98.97 E-value=2.6e-09 Score=67.65 Aligned_cols=338 Identities=12% Similarity=0.017 Sum_probs=173.5 Q ss_pred CCcCCCCccccccccccccccCCCcchhhccccCceEEEECCCceeccChHHHHHHHHHHhccchhcccccHHHHHHHHH Q lcl|Aclame:pro 1 MSRNKTRRAARAASAHVRTANTDAPTEHHTDRAAQAEVFSFGDPVEVLDRRELLDYVECMRMGQWYEPPMPWDGLARSFR 80 (368) Q Consensus 1 m~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~r 80 (368) |++==..-=+....+..+. +.++ ..+.....+ .+.|.+-++...+...+.-...|++... ......+.+ T Consensus 1 ~~~~~d~~g~p~~~~~~~~-~~~~------~~~~~~~~~-~~~~~~gltp~~l~~iLr~a~~gd~~~~---~~L~e~m~e 69 (526) T protein:vir:99 1 MAQIVDVYGNPIRTQQLRE-PQTS------RLAGLAKEF-AQHPAKGLTPAKLARILVEAEQGNLQAQ---AELFMDMEE 69 (526) T ss_pred CCeeECCCCCccccccccc-hhhh------hhhhhhhhh-cccCcCCCCHHHHHHHHHhhhCCCHHHH---HHHHHHHHh Confidence 7754321111111111110 0000 111111222 2455555665544333332222322110 001112223 Q ss_pred hcccccchhhhccchHHhh---ccCCCCcC----------------HHHHHHHH---HhHhhhCCeeEEEEecCC---cc Q lcl|Aclame:pro 81 AAAHHSSAVYVKRNILVST---FIPHPLLS----------------RATFERLV---LDWQVFGNAYLERRENVL---GG 135 (368) Q Consensus 81 ~~~~~~~~~~~~~~~~l~~---~~~n~~~~----------------~~~~~~~~---~~~ll~Gnay~~i~r~~~---G~ 135 (368) .+++...++.......+.. ..|+...+ ...|..++ .+.+.+|-+..+|++... -. T Consensus 70 ~D~~i~s~l~~Rk~av~~~~w~I~p~~~~~~~~~~~a~~v~~~l~~~~~~~~~i~~~lda~~~G~s~~Eivw~~~~g~~~ 149 (526) T protein:vir:99 70 RDAHLFAEMSKRKRAILGLDWAVEPPRNASAAEKADADYLHELLLDLEGLEDLLLDALDGIGHGYSCIELEWALQGREWM 149 (526) T ss_pred hChHHHHHHHHHHHHHhCCCceEecCCCCCHHHHHHHHHHHHHHhcccCHHHHHHHHHHhhhhcceeEEEEEeecCCcee Confidence 3444333332222111110 11111110 01133333 456689999999986543 35 Q ss_pred eEEEEEecccccccccCCCeeEEEeC-CceEEEEcCcc-EEEecCCCCcCCccccchhhHHHHHHHHHHHHHHHHHHHHh Q lcl|Aclame:pro 136 TIRLDTPLAKYVRRGLDLNTYFFVQN-WQQPYTFAAGS-VFHLQEPDINQEVYGLPEYLSALNATWLNESATLFRRRYYK 213 (368) Q Consensus 136 ~~~L~~l~p~~v~~~~~~~~~~~~~~-~~~~~~~~~~d-viH~r~~~~~~~~~G~spi~~a~~~i~~~~~a~~~~~~~f~ 213 (368) |..+.+.++.++...........+.. +.....+++.. |+|.. ....+..||.+.+..+.-....-..+.++...|.. T Consensus 150 ~~~l~~r~~~~f~~~~~~~~~l~~~~~~~~g~~l~~~k~i~~~~-~~~~g~p~g~gLlr~~~w~~~fK~~~~~~w~~f~E 228 (526) T protein:vir:99 150 PLAFHHRPQSWFQLNPEDQNELRLRDNSPAGEALQPFGWIIHRP-RARSGYVARSGLFRVLAWPYLFRHYATSDLAEMLE 228 (526) T ss_pred EEEeeeecccceeeccCCCcEEEecCCCCCceeecCCCeEEEee-cCCcCCccccchHHHHHHHHHHHHhhHHHHHHHHH Confidence 77899999999888776665444433 34556677765 55554 44456789999999999999999999999999999 Q ss_pred ccCCCceeEEeCCCCccHHHHHHHHHHHHHhccccccccccccccCccccccccccccchhhHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 214 NGSHAGFILYMTDAAQKQEDVDTLREAMKSAKGPGNFRNLFMYAPNGKKDGIQLLPVSEVAAKDEFWNIKNVTRDDQLAA 293 (368) Q Consensus 214 ng~~p~gil~~~~~~l~~e~~~~~k~~~~~~~g~~n~~~~~~l~~~g~~~g~~~~pl~~~~~d~qf~e~~~~~~~~Ia~~ 293 (368) .-++|--|.+++.. -++++++++.+.+.+..+ +++ ++ .|.+ ..+++...+.. .-.-|.+.-++..++|+++ T Consensus 229 ~yG~P~~igky~~~-a~~~ek~~L~~av~~i~~--d~~--~i-iP~~--~~ie~~ea~~~-~~~~f~~li~~~d~~Isk~ 299 (526) T protein:vir:99 229 IYGLPIRLGKYPPG-TADEEKATLLRAVTGLGH--AAA--GI-IPET--MAIDFQQAAQG-SSEPFLAMMRQSEDAISKA 299 (526) T ss_pred HcCCceEEEecCCC-CCHHHHHHHHHHHHHHhh--CcE--EE-ecCC--ceeEEeecCCC-CHHHHHHHHHHHHHHHHHH Confidence 99999999888654 588888888887776532 222 22 2222 34666665432 2345888888999999988 Q ss_pred hCCChHHhcccc------cccccccCHHHHHHHHHHHHHHHHHHHHHH-HHhhcCc----------------ceEeechh Q lcl|Aclame:pro 294 HRVPPQLMGIIP------NNTGGFGDVEKAAMVFARNEVKPLQDRLLA-INDWIGD----------------EVVRFAPY 350 (368) Q Consensus 294 fgVPp~~lg~~~------~~~~~~sn~e~~~~~f~~~tl~P~~~~ie~-l~~~l~~----------------~~~~F~~~ 350 (368) . ||..- +.+++++..+..+.. ..+.+.-.++.|++ +|+.|-. ..++|+. T Consensus 300 i------LGqtlTs~~~~g~~gS~a~g~vh~~v-~~di~~aDa~~i~~tln~~Li~~l~~~N~~~~~~~~~~p~~~~~~- 371 (526) T protein:vir:99 300 V------LGGTLTSTTSQSGGGAFALGQVHNEV-RHDLLASDARQLAATLSRDLLWPLLVLNRPGSPDVRRAPRLVFDL- 371 (526) T ss_pred H------hhhhhccccccCcchhhhHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcCCccccceEEeCC- Confidence 6 44321 112333322222221 12222233333332 3332211 1244443 Q ss_pred hhhcCChhhhhhhhhhcC Q lcl|Aclame:pro 351 ALGGHDQPAAAPGGQRSA 368 (368) Q Consensus 351 ~Llr~D~~~ra~~~~~~~ 368 (368) -..-|.+++|++-.+-+ T Consensus 372 -~e~eDl~~~a~~~~~L~ 388 (526) T protein:vir:99 372 -REQADITSMAQSIPALV 388 (526) T ss_pred -CCcccHHHHHHHHHHHH Confidence 33456666666665555 No 117 >protein:vir:79233 Length: 526 # NCBI annotation: portal protein # Family: family:all:313 # MgeID: mge:1867 # MgeName: Phage MP22 # Cross-refs: genbank:acc:YP_001469155;genbank:gi:157834998;genbank:GeneID:5648814 Probab=98.93 E-value=4.8e-09 Score=66.20 Aligned_cols=339 Identities=12% Similarity=0.018 Sum_probs=176.3 Q ss_pred CCcCCCCccccccccccccccCCCcchhhccccCceEEEECCCceeccChHHHHHHHHHHhccchhcccccHHHHHHHHH Q lcl|Aclame:pro 1 MSRNKTRRAARAASAHVRTANTDAPTEHHTDRAAQAEVFSFGDPVEVLDRRELLDYVECMRMGQWYEPPMPWDGLARSFR 80 (368) Q Consensus 1 m~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~r 80 (368) |++==..-=+.......+ .+.++ ..+.....++ +.|.+-+|...+...+.-...|++... ......+.+ T Consensus 1 ~~~~~d~~g~p~~~~~~~-~~~~~------~~~~~~~~~~-~~~~~gltp~~l~~il~~a~~gd~~~~---~~L~edm~e 69 (526) T protein:vir:79 1 MAQIVDVYGNPIRPQQLR-EPQTS------RLAGLAKEFA-QHPAKGLTPAKLARILVEAEQGNLQAQ---AELFMDMEE 69 (526) T ss_pred CCeeeCCCCCccCccccc-hhhhh------hhhhhhhhcc-cCCCCCcCHHHHHHHHHHhhCCCHHHH---HHHHHHHHh Confidence 775422111101100000 00000 0011112222 345555555544333333223332111 011122333 Q ss_pred hcccccchhhhccchHHhh---ccCCCCcC----------------HHHHHHHH---HhHhhhCCeeEEEEecCCc---c Q lcl|Aclame:pro 81 AAAHHSSAVYVKRNILVST---FIPHPLLS----------------RATFERLV---LDWQVFGNAYLERRENVLG---G 135 (368) Q Consensus 81 ~~~~~~~~~~~~~~~~l~~---~~~n~~~~----------------~~~~~~~~---~~~ll~Gnay~~i~r~~~G---~ 135 (368) .+.+...++.......+.. ..|+...+ ...|..++ .+.+.+|-+..+|++...| . T Consensus 70 ~D~~i~s~l~~Rk~av~~~~w~I~p~~~~~~~~~~~a~~v~~~l~~~~~~~~~i~~~ldA~~~G~s~~Ei~w~~~~g~~~ 149 (526) T protein:vir:79 70 RDAHLFAEMSKRKRAILGLDWAVEPPRNASAAEKADADYLHELLLDLEGLEDLLLDALDGIGHGYSCIELEWALQGREWM 149 (526) T ss_pred hChHHHHHHHHHHHHHhCCCceEecCCCCChHHHHHHHHHHHHHhcccCHHHHHHHHHhhhhhcceeEEEEEeecCCcee Confidence 4444444433222111110 11111110 01244444 4556799999999865432 5 Q ss_pred eEEEEEecccccccccCCCeeEEEeC-CceEEEEcCccEEEecCCCCcCCccccchhhHHHHHHHHHHHHHHHHHHHHhc Q lcl|Aclame:pro 136 TIRLDTPLAKYVRRGLDLNTYFFVQN-WQQPYTFAAGSVFHLQEPDINQEVYGLPEYLSALNATWLNESATLFRRRYYKN 214 (368) Q Consensus 136 ~~~L~~l~p~~v~~~~~~~~~~~~~~-~~~~~~~~~~dviH~r~~~~~~~~~G~spi~~a~~~i~~~~~a~~~~~~~f~n 214 (368) |..|.+.++.++...........+.. ......+++...|..++....+..||.+.+..+.-....-..+.++...|... T Consensus 150 ~~~l~~r~~~~F~~~~~~~~~l~~~~~~~~g~~l~~~k~iv~~~~~~~g~p~g~gLlr~~~w~~~fK~~~~~~w~~F~E~ 229 (526) T protein:vir:79 150 PLAFHHRPQSWFQLNPEDQNELRLRDNSPAGEALQPFGWIIHRPRARSGYVARSGLFRVLAWPYLFRHYATSDLAEMLEI 229 (526) T ss_pred EEEeeeecccceEeccCCCcEEEecCCCCCceeecCCceEEEeecCCcCCccccchHHHHHHHHHHHHhhHHHHHHHHHH Confidence 77899999998887766665444433 34556777776544444444567899999999999999999999999999999 Q ss_pred cCCCceeEEeCCCCccHHHHHHHHHHHHHhccccccccccccccCccccccccccccchhhHHHHHHHHHHHHHHHHHHh Q lcl|Aclame:pro 215 GSHAGFILYMTDAAQKQEDVDTLREAMKSAKGPGNFRNLFMYAPNGKKDGIQLLPVSEVAAKDEFWNIKNVTRDDQLAAH 294 (368) Q Consensus 215 g~~p~gil~~~~~~l~~e~~~~~k~~~~~~~g~~n~~~~~~l~~~g~~~g~~~~pl~~~~~d~qf~e~~~~~~~~Ia~~f 294 (368) -++|--|.+++.. -++++++++.+.+.+..+ +++ ++ .|.+ ..++++..+.. .-.-|.+.-++..++|+++. T Consensus 230 yG~P~~igky~~~-a~~~ek~~L~~av~~i~~--da~--~i-iP~~--~~ie~~ea~~~-~~~~f~~li~~~d~~Isk~i 300 (526) T protein:vir:79 230 YGLPIRLGKYPPG-TADEEKATLLRAVTGLGH--AAA--GI-IPET--MAIDFQQAAQG-SSEPFLAMMRQSEDAISKAV 300 (526) T ss_pred cCCceEEEecCCC-CCHHHHHHHHHHHHHHhc--CcE--EE-ecCC--ceeEEeecCCC-CHHHHHHHHHHHHHHHHHHH Confidence 8999989888654 578888888877776532 222 22 2322 34666665432 33458888899999999886 Q ss_pred CCChHHhcccc------cccccccCHHHHHHHHHHHHHHHHHHHHHH-HHhhcCcc----------------eEeechhh Q lcl|Aclame:pro 295 RVPPQLMGIIP------NNTGGFGDVEKAAMVFARNEVKPLQDRLLA-INDWIGDE----------------VVRFAPYA 351 (368) Q Consensus 295 gVPp~~lg~~~------~~~~~~sn~e~~~~~f~~~tl~P~~~~ie~-l~~~l~~~----------------~~~F~~~~ 351 (368) ||..- +.+++++..+..+.. ..+.+.-.++.|++ +|+.|-+. .++|+. T Consensus 301 ------LGqtlTs~~~~g~~gS~a~g~vh~~v-~~di~~aDa~~i~~tln~~Li~~l~~~N~~~~~~~~~~p~~~~~~-- 371 (526) T protein:vir:79 301 ------LGGTLTSTTSQSGGGAFALGQVHNEV-RHDILASDARQLAATLSRDLLWPLLVLNRPGSPDVRRAPRLVFDL-- 371 (526) T ss_pred ------hhhhhccccccCcchhhhhHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcCCccccceEEeCC-- Confidence 44321 112333332222222 22233344444442 44432111 234443 Q ss_pred hhcCChhhhhhhhhhcC Q lcl|Aclame:pro 352 LGGHDQPAAAPGGQRSA 368 (368) Q Consensus 352 Llr~D~~~ra~~~~~~~ 368 (368) -..-|.+++|++..+-+ T Consensus 372 ~e~eDl~~~a~~~~~L~ 388 (526) T protein:vir:79 372 REQADITSMAQSIPALV 388 (526) T ss_pred CCcccHHHHHHHHHHHH Confidence 34456667777666555 No 118 >protein:vir:99563 Length: 862 # NCBI annotation: minor head protein-like protein # Family: family:all:297 # MgeID: mge:1544 # MgeName: BcepF1 # Cross-refs: genbank:acc:YP_001039808;genbank:gi:126011058;genbank:GeneID:4818258 Probab=98.93 E-value=5.1e-10 Score=71.52 Aligned_cols=346 Identities=11% Similarity=0.002 Sum_probs=150.9 Q ss_pred CCcCCCCccccccc--cccccccCC---CcchhhccccC-ceEEEE-C--CCceeccChHHH----------HHHHHHHh Q lcl|Aclame:pro 1 MSRNKTRRAARAAS--AHVRTANTD---APTEHHTDRAA-QAEVFS-F--GDPVEVLDRREL----------LDYVECMR 61 (368) Q Consensus 1 m~~~k~~~~~~~~~--~~~~~~~~~---~~~~~~~~~~~-~~~~~~-~--g~p~~~~~~~~~----------~~~~~~~~ 61 (368) |.+..+-...++.. -....+... +....+.+.-. ...+.. . ..+..+ +.... ..+..+++ T Consensus 66 ~~~~~~~~~~~~~~~~~a~~~a~~~~~~~~~~~~~Dgl~n~~~~lG~~~~~s~y~~-~~~~~~~~~~~~f~gyql~alY~ 144 (862) T protein:vir:99 66 VEISDSVNAKSVSGKNFAMDSAVRSAIKAITGFAMDDGGGAPVPIGAEGKQSSYAV-PEALQDWYLSQGFIGHQACALIA 144 (862) T ss_pred ccccccccchhhhhhhhcchhhcchhhhhhhhhhhhcchhhhhhcccccccccccc-chhccccccccCcccHHHHHHHH Confidence 33222111100000 000000000 00000000000 000000 0 001100 00000 00111111 Q ss_pred ccchhcccccHHHHHHHHHhcccccchhhh-------ccch-HHhhccCCCCcCHHHHHHHHHhHhhhCCeeEEEEecC- Q lcl|Aclame:pro 62 MGQWYEPPMPWDGLARSFRAAAHHSSAVYV-------KRNI-LVSTFIPHPLLSRATFERLVLDWQVFGNAYLERRENV- 132 (368) Q Consensus 62 ~~~~~~~p~~~~~l~~~~r~~~~~~~~~~~-------~~~~-~l~~~~~n~~~~~~~~~~~~~~~ll~Gnay~~i~r~~- 132 (368) ..++....+..+.+-....+..+.. +... ..+.......--..-+...+...-++|.+++++..++ T Consensus 145 -----~~~larkiVd~pAeDatR~g~~I~~~~d~~e~~~e~~~~ie~~~~rL~v~~~l~eair~~RLyGga~ililv~~~ 219 (862) T protein:vir:99 145 -----QHWLVDKACSLAGEDAIRNGWHLKSLGEGEEIDEESLEKFKAIDVEFKVKENLIEFNRFKNVFGIRVAIFVVDSE 219 (862) T ss_pred -----hCchhhhhhhhhhHHHhhCCceEeecCcccccCHHHHHHHHHHHHHhhHHHHHHHHHHhcccccceEEEEEecCc Confidence 1122111111111110000111100 0000 0000000000001112222333336788887765321 Q ss_pred C---------------cceEEEEEeccccccccc------C--CCeeEE---EeCCceEEEEcCccEEEecCCCC----- Q lcl|Aclame:pro 133 L---------------GGTIRLDTPLAKYVRRGL------D--LNTYFF---VQNWQQPYTFAAGSVFHLQEPDI----- 181 (368) Q Consensus 133 ~---------------G~~~~L~~l~p~~v~~~~------~--~~~~~~---~~~~~~~~~~~~~dviH~r~~~~----- 181 (368) + |.++.|..++|..+.... + ...|+. +...+ ..+.++-||||.+... T Consensus 220 D~~~LsqPLn~e~I~kG~lkgl~vlDp~w~~p~~v~~~~~Dp~sp~yGkP~~y~I~g--~~IH~SRliif~g~~vpd~lk 297 (862) T protein:vir:99 220 DPDYYEKPFNPDGITPGSYRGISQIDPYWMMPMLTAESTADPSSQFFYEPEFWIISG--QKYHRSHLIIARGPQPADILK 297 (862) T ss_pred CchhhhcCcCcccccccceeEEEEechhhhcccccccccccccccccCCceeeeecC--eeeccceeEEecCCCchhhhh Confidence 1 345677888877665321 1 111211 11222 3567788888865432 Q ss_pred -cCCccccchhhHHHHHHHHHHHHHHHHHHHHhccCCCceeEEeCCC-CccHHHHHHHHHHHHHh-cccccccccccccc Q lcl|Aclame:pro 182 -NQEVYGLPEYLSALNATWLNESATLFRRRYYKNGSHAGFILYMTDA-AQKQEDVDTLREAMKSA-KGPGNFRNLFMYAP 258 (368) Q Consensus 182 -~~~~~G~spi~~a~~~i~~~~~a~~~~~~~f~ng~~p~gil~~~~~-~l~~e~~~~~k~~~~~~-~g~~n~~~~~~l~~ 258 (368) ...++|+|.++.+.+.|.....+......++.+.... ++++... .+..+ +.+.+.++.. .+-+|.| ++++.. T Consensus 298 ~ay~f~G~SvLe~iyd~L~~~d~t~~saa~Ll~ka~l~--v~ktd~l~~l~~e--d~l~~r~~~~~~~rdN~G-i~liD~ 372 (862) T protein:vir:99 298 PTYIFGGIPLVQRIYERVYAAERTANEAPLLAMNKRTT--AIHTDTAKAIANE--DKFIQRLMFWVRYRDNHA-VKVLGT 372 (862) T ss_pred ccCCccCccHHHHHHHHHHHHHHHHHHHHHHHHHhccc--eeechhHhhhccH--HHHHHHHHHHHhccCcce-eEEecC Confidence 2345799999999999999999988888888774433 4444321 22222 2344444332 2234444 455532 Q ss_pred CccccccccccccchhhHHHHHHHHHHHHHHHHHHhCCChHHh-cccccccccccCHHHHHHHHHH-------HHHHHHH Q lcl|Aclame:pro 259 NGKKDGIQLLPVSEVAAKDEFWNIKNVTRDDQLAAHRVPPQLM-GIIPNNTGGFGDVEKAAMVFAR-------NEVKPLQ 330 (368) Q Consensus 259 ~g~~~g~~~~pl~~~~~d~qf~e~~~~~~~~Ia~~fgVPp~~l-g~~~~~~~~~sn~e~~~~~f~~-------~tl~P~~ 330 (368) +-+|+.++.+..+ +-+......+.||.+.+||...| |.... +..++.+...+.|+. ..|.|.+ T Consensus 373 -----eEe~e~ls~slSG--L~dll~~~~q~IAaas~IP~tiLfGqspa--GlnATGE~D~~nYyD~I~s~QE~~L~P~L 443 (862) T protein:vir:99 373 -----DETMEQFDTSLAD--FDAVIMGQYQLVASIAKTPATKLLGTAPK--GFNSTGEFETISYHEELESIQEHVYMPFL 443 (862) T ss_pred -----CCceeEEecccCC--hHHHHHHHHHHHHhhhCCCceeecccCcc--cccCchHHHHHHHHHHHHHHHHHHHHHHH Confidence 2245544443332 23445556678999999999864 64422 233455666676765 4578888 Q ss_pred HHHHHHH-hhcCc-ceEeechhhhhcCChhhhhhhhhhcC Q lcl|Aclame:pro 331 DRLLAIN-DWIGD-EVVRFAPYALGGHDQPAAAPGGQRSA 368 (368) Q Consensus 331 ~~ie~l~-~~l~~-~~~~F~~~~Llr~D~~~ra~~~~~~~ 368 (368) ++|..+. ..++. .-+.|.+..|...|.+.+|+...+-| T Consensus 444 erL~~li~~~lg~~~d~~ieFnpL~~~sekEkAEi~kk~A 483 (862) T protein:vir:99 444 QRHYLISRLSLGIQHEIDVVMEPVASMTAQQQADLNKTKA 483 (862) T ss_pred HHHHHHHHHhcCCCCcceEEeCCCCCCCHHHHHHHHHHHH Confidence 8887533 33432 23555666899999999999776655 No 119 >protein:vir:96068 Length: 765 # NCBI annotation: conserved hypothetical protein ORF017 # Family: family:all:297 # MgeID: mge:1597 # MgeName: F8 # Cross-refs: genbank:acc:YP_001294434;genbank:gi:149408331;genbank:GeneID:5237187 Probab=98.90 E-value=1.3e-09 Score=69.28 Aligned_cols=338 Identities=11% Similarity=0.016 Sum_probs=151.3 Q ss_pred CCcC-------CCCccccccccccccc-cCCCcchhhcccc---C---ceEEEE-CCCceeccChHHHHHHHHHHhccch Q lcl|Aclame:pro 1 MSRN-------KTRRAARAASAHVRTA-NTDAPTEHHTDRA---A---QAEVFS-FGDPVEVLDRRELLDYVECMRMGQW 65 (368) Q Consensus 1 m~~~-------k~~~~~~~~~~~~~~~-~~~~~~~~~~~~~---~---~~~~~~-~g~p~~~~~~~~~~~~~~~~~~~~~ 65 (368) |.+. +.+.+....+...... ++. ..+.+.+ + ....+. +.++..+-. ..+++ |.. +. T Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~a~ds~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~--~~~-~~- 107 (765) T protein:vir:96 37 MIKLGKIRGWNVEPEKAPVIRSVKDFLEPGL---SVAMDSAYGDGPTPAAKAAAGGQNPYVVPT--MLQDW--YNS-QG- 107 (765) T ss_pred chhHHHHhhcccccccCCCCCCCCcccCccc---ceeccccccccccchHHHhhhccCccchhh--HHHhh--hcc-cC- Confidence 2221 1111111110000000 000 0000000 0 000011 011111100 01110 000 00 Q ss_pred hcccccHHHHHHHHHhcccccchhhhccchHHhh-c----cCCCC------------c---CHHHHHHHHHhHhhhCCee Q lcl|Aclame:pro 66 YEPPMPWDGLARSFRAAAHHSSAVYVKRNILVST-F----IPHPL------------L---SRATFERLVLDWQVFGNAY 125 (368) Q Consensus 66 ~~~p~~~~~l~~~~r~~~~~~~~~~~~~~~~l~~-~----~~n~~------------~---~~~~~~~~~~~~ll~Gnay 125 (368) +.-+.+..+++.+.-....+..-....+.. + ..+.. . ..+-+...+...-++|.+| T Consensus 108 ----f~gyql~alY~~~~l~rkiVd~pAeDa~R~g~~I~~~~~e~~~~~~~~l~~~~~rl~v~~~l~ea~~~~RlyGga~ 183 (765) T protein:vir:96 108 ----FIGYQACAIISQHWLVDKACSMSGEDAARNGWELKSDGRKLSDEQSALIARRDMEFRVKDNLVELNRFKNVFGVRI 183 (765) T ss_pred ----CccHHHHHHHHhCchhhhhhhcchHHhhcCCceeecCccccCHHHHHHHHHHHHHhhHHHHHHHHHHHhhhceeeE Confidence 111223333443332222221111100000 0 00000 0 0111222233445789999 Q ss_pred EEEEecC-C---------------cceEEEEEecccccccccC--------CCeeEE---EeCCceEEEEcCccEEEecC Q lcl|Aclame:pro 126 LERRENV-L---------------GGTIRLDTPLAKYVRRGLD--------LNTYFF---VQNWQQPYTFAAGSVFHLQE 178 (368) Q Consensus 126 ~~i~r~~-~---------------G~~~~L~~l~p~~v~~~~~--------~~~~~~---~~~~~~~~~~~~~dviH~r~ 178 (368) +.+.-++ + |....|..++|..+..... ...|+. +...+ ..+.+..||||.+ T Consensus 184 i~i~i~~~D~~~l~~PL~~~~I~kg~~kgl~vldp~~~~~~~v~e~~~Dp~sp~fg~P~~y~i~g--~~IH~SRli~~~g 261 (765) T protein:vir:96 184 ALFVVESDDPDYYEKPFNPDGIAPGSYKGISQIDPYWAMPQLTAESTADPSAEHFYEPDFWIISG--KKYHRSHLVVVRG 261 (765) T ss_pred EEEEecccCcchhhccccccccccceeeEEEEechhhcccccchhccccccccccCcceeeeecC--ceeccceEEEecC Confidence 8875421 1 3445677777765543211 111221 11223 3567888999976 Q ss_pred CCC------cCCccccchhhHHHHHHHHHHHHHHHHHHHHhccCCCceeEEeCCC-CccHHHHHHHHHHHHHhc-ccccc Q lcl|Aclame:pro 179 PDI------NQEVYGLPEYLSALNATWLNESATLFRRRYYKNGSHAGFILYMTDA-AQKQEDVDTLREAMKSAK-GPGNF 250 (368) Q Consensus 179 ~~~------~~~~~G~spi~~a~~~i~~~~~a~~~~~~~f~ng~~p~gil~~~~~-~l~~e~~~~~k~~~~~~~-g~~n~ 250 (368) ..+ ..+++|+|.++.+.+.|.....+......++...... ++++... .+..+ +.+.+.++... .-+|- T Consensus 262 ~~lpd~lk~~~~~~G~Svlq~~yd~I~~~~~t~~~~a~Ll~k~~~~--v~k~~~~~~l~~~--~~l~~r~~~~~~~r~n~ 337 (765) T protein:vir:96 262 PQPPDILKPTYIFGGIPLTQRIYERVYAAERTANEAPLLAMSKRTS--TIHVDVEKAIANE--DAFNARLAFWIANRDNH 337 (765) T ss_pred CCchhhhccccCccCccHHHHHHHHHHHHHHHHHHHHHHHHHhccc--eeeechHhhhccH--HHHHHHHHHHHHhcCCc Confidence 542 2356799999999999999888887777777654433 4444321 12221 23444443322 22343 Q ss_pred ccccccccCccccccccccccchhhHHHHHHHHHHHHHHHHHHhCCChHHh-cccccccccccCHHHHHHHHHH------ Q lcl|Aclame:pro 251 RNLFMYAPNGKKDGIQLLPVSEVAAKDEFWNIKNVTRDDQLAAHRVPPQLM-GIIPNNTGGFGDVEKAAMVFAR------ 323 (368) Q Consensus 251 ~~~~~l~~~g~~~g~~~~pl~~~~~d~qf~e~~~~~~~~Ia~~fgVPp~~l-g~~~~~~~~~sn~e~~~~~f~~------ 323 (368) .++++.. +-+|+.++.+..+ +-+......++||.+.+||...| |.... +..++.|...+.|+. T Consensus 338 -g~~~id~-----ee~~e~~s~~lsg--l~d~l~~~~~~iAaas~IP~t~LfGqsp~--GlnATGe~D~~nYyD~I~s~Q 407 (765) T protein:vir:96 338 -GVKVIGI-----DETMEQFDTNLSD--FDSVIMNQYQLVAAIAKTPATKLLGTSPK--GFNATGEHETISYHEELESIQ 407 (765) T ss_pred -eeEEecC-----CcceeEEecccCC--HHHHHHHHHHHHHhhhCCCeeeeccCCcc--cccCcchHHHHHHHHHHHHHH Confidence 3444432 2345555544433 34556667889999999999765 54322 222445666666766 Q ss_pred -HHHHHHHHHHHHHHhh---cCcceEeechhhhhcCChhhhhhhhhhcC Q lcl|Aclame:pro 324 -NEVKPLQDRLLAINDW---IGDEVVRFAPYALGGHDQPAAAPGGQRSA 368 (368) Q Consensus 324 -~tl~P~~~~ie~l~~~---l~~~~~~F~~~~Llr~D~~~ra~~~~~~~ 368 (368) ..|.|.++++-.+..+ +.+ -+.|.+..|...|.+.+|+...+-| T Consensus 408 e~~l~p~le~L~~li~~s~~i~~-d~~i~FnpL~~~sekEkAei~~k~A 455 (765) T protein:vir:96 408 EHIFDPLLERHYLLLAKSESIDV-QLEIVWNPVDSTTSQQQAELNNKKA 455 (765) T ss_pred HHHHHHHHHHHHHHHHHhcCCCC-cceEEeCCCCCCCHHHHHHHHHHHH Confidence 4566666655443221 222 3566667899999999999766655 No 120 >protein:vir:1986 Length: 512 # NCBI annotation: Hypothetical protein # Family: family:all:313 # MgeID: mge:320 # MgeName: Mu # Cross-refs: genbank:acc:NP_050633;genbank:gi:9633520;genbank:GeneID:2636304 Probab=98.87 E-value=1.3e-08 Score=63.89 Aligned_cols=339 Identities=12% Similarity=-0.019 Sum_probs=174.4 Q ss_pred CCcCCCCccccccccccccccCCCcchhhccccCceEEEECCCceeccChHHHHHHHHHHhccchhcccccHHHHHHHHH Q lcl|Aclame:pro 1 MSRNKTRRAARAASAHVRTANTDAPTEHHTDRAAQAEVFSFGDPVEVLDRRELLDYVECMRMGQWYEPPMPWDGLARSFR 80 (368) Q Consensus 1 m~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~r 80 (368) ||+==..-=+....+.... +..+ ..+....-|+ +.|..-+|...+...+.-...|++...- .+ ...+.. T Consensus 1 m~~~~d~~g~p~~~~~~~~-~~~~------~~~~~~~~~~-~~~~~gltp~~l~~iL~~a~~gd~~~~~-~L--~~dm~~ 69 (512) T protein:vir:19 1 MGRILDISGQPFDFDDEMQ-SRSD------ELAMVMKRTQ-EHPSSGVTPNRAAQMLRDAERGDLTAQA-DL--AFDMEE 69 (512) T ss_pred CcceeCCCCCccccccccc-cccc------hhcccchhhc-cccccCCCHHHHHHHHHHhhCCCHHHHH-HH--HHHHHh Confidence 8754221111111111100 0010 0011112222 3455556655544433333233322110 00 112223 Q ss_pred hcccccchhhhccchHHhh---ccCCCCcC----------------HHHHHHHH---HhHhhhCCeeEEEEe---cCCcc Q lcl|Aclame:pro 81 AAAHHSSAVYVKRNILVST---FIPHPLLS----------------RATFERLV---LDWQVFGNAYLERRE---NVLGG 135 (368) Q Consensus 81 ~~~~~~~~~~~~~~~~l~~---~~~n~~~~----------------~~~~~~~~---~~~ll~Gnay~~i~r---~~~G~ 135 (368) .+++...++.......+.. ..|....+ ...|..++ .+.+.+|-+..+|++ ++... T Consensus 70 ~D~hi~s~l~~Rk~av~~~~w~I~p~~~~~~~~~~~a~~v~~~l~~~~~f~~~~~~lldA~~~G~s~~Ei~w~~~~g~~~ 149 (512) T protein:vir:19 70 KDTHLFSELSKRRLAIQALEWRIAPARDASAQEKKDADMLNEYLHDAAWFEDALFDAGDAILKGYSMQEIEWGWLGKMRV 149 (512) T ss_pred hChHHHHHHHHHHHHHhCCCceEecCCCCCHHHHHHHHHHHHHHhcCCCHHHHHHHHHhhhhhcceeeeeEeeeeCCcee Confidence 3443333332222111110 11111100 00133333 456679999999987 44456 Q ss_pred eEEEEEecccccccccCCCeeEEEe-CCceEEEEcCccEEEecCCCCcCCccccchhhHHHHHHHHHHHHHHHHHHHHhc Q lcl|Aclame:pro 136 TIRLDTPLAKYVRRGLDLNTYFFVQ-NWQQPYTFAAGSVFHLQEPDINQEVYGLPEYLSALNATWLNESATLFRRRYYKN 214 (368) Q Consensus 136 ~~~L~~l~p~~v~~~~~~~~~~~~~-~~~~~~~~~~~dviH~r~~~~~~~~~G~spi~~a~~~i~~~~~a~~~~~~~f~n 214 (368) |..+.++++.++....+......+. .+.....+++...+..++....+..||.+.+..+......-..+.++...|... T Consensus 150 ~~~~~~r~~~~f~~~~~~~~~lr~~~~~~~G~~l~~~k~i~~~~~~~~g~p~g~gLlr~~~w~~~fK~~~~~~w~~f~E~ 229 (512) T protein:vir:19 150 PVALHHRDPALFCANPDNLNELRLRDASYHGLELQPFGWFMHRAKSRTGYVGTNGLVRTLIWPFIFKNYSVRDFAEFLEI 229 (512) T ss_pred eeeeeeeccccceeccCCCcEEEecCCCCCceeecCCceEEEeccCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHHHH Confidence 7889999999888776655433333 333456677766554444444577899999999999999999999999999999 Q ss_pred cCCCceeEEeCCCCccHHHHHHHHHHHHHhccccccccccccccCccccccccccccchhhHHHHHHHHHHHHHHHHHHh Q lcl|Aclame:pro 215 GSHAGFILYMTDAAQKQEDVDTLREAMKSAKGPGNFRNLFMYAPNGKKDGIQLLPVSEVAAKDEFWNIKNVTRDDQLAAH 294 (368) Q Consensus 215 g~~p~gil~~~~~~l~~e~~~~~k~~~~~~~g~~n~~~~~~l~~~g~~~g~~~~pl~~~~~d~qf~e~~~~~~~~Ia~~f 294 (368) -++|--|-+++. ..++++++++.+.+.+.. .+++. ++ |.| ..++++..+- ....-|.+.-++-..+|+++. T Consensus 230 yG~P~~igky~~-~a~~~ek~~L~~al~~~~--~~a~~--ii-P~~--~~ie~~ea~~-~~~~~y~~li~~~d~~Isk~i 300 (512) T protein:vir:19 230 YGLPMRVGKYPT-GSTNREKATLMQAVMDIG--RRAGG--II-PMG--MTLDFQSAAD-GQSDPFMAMIGWAEKAISKAI 300 (512) T ss_pred cCCCeeEEecCC-CCCHHHHHHHHHHHHHHh--hCcEE--Ee-cCC--ceEEEeecCC-CCHHHHHHHHHHHHHHHHHHH Confidence 999988888764 357888888888777652 22222 22 222 3456655443 334558888999999999884 Q ss_pred CCChHHhcccc--c--ccccccCHHHHHHHHHHHHHHHHHHHHHH-HHhhcCcc----------------eEeechhhhh Q lcl|Aclame:pro 295 RVPPQLMGIIP--N--NTGGFGDVEKAAMVFARNEVKPLQDRLLA-INDWIGDE----------------VVRFAPYALG 353 (368) Q Consensus 295 gVPp~~lg~~~--~--~~~~~sn~e~~~~~f~~~tl~P~~~~ie~-l~~~l~~~----------------~~~F~~~~Ll 353 (368) +|..- + ++++++..+..+ .-..+.+.-.++.|++ +|+.|-+. +++|+.. . T Consensus 301 ------LGqtlTs~~g~~Gs~a~~~vh~-ev~~di~~aDa~~i~~tln~~li~~l~~~N~~~~~~~~~~p~~~f~~~--e 371 (512) T protein:vir:19 301 ------LGGTLTTEAGDKGARSLGEVHD-EVRREIRNADVGQLARSINRDLIYPLLALNSDSTIDINRLPGIVFDTS--E 371 (512) T ss_pred ------hhhhhcccccccchhhHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCccccceEEecCC--C Confidence 44331 1 122233222222 2233334445555543 55433211 2444432 2 Q ss_pred cCChhhhhhhhhhcC Q lcl|Aclame:pro 354 GHDQPAAAPGGQRSA 368 (368) Q Consensus 354 r~D~~~ra~~~~~~~ 368 (368) .-|.++.++.-.+-+ T Consensus 372 ~eDl~~~a~~~~~l~ 386 (512) T protein:vir:19 372 AGDITALSDAIPKLA 386 (512) T ss_pred hhhHHHHHHHHHHHh Confidence 345556665554433 No 121 >protein:vir:79063 Length: 491 # NCBI annotation: gp3 # Family: family:all:313 # MgeID: mge:1862 # MgeName: phiE255 # Cross-refs: genbank:acc:YP_001111203;genbank:gi:134288841;genbank:GeneID:4960737 Probab=98.81 E-value=3.9e-08 Score=61.17 Aligned_cols=324 Identities=12% Similarity=0.107 Sum_probs=158.0 Q ss_pred CCcC-----CCCccccccccccccccCCCcchhhccccCceEEEECCC--c--eeccChHHHHHHHHHHhccchhccccc Q lcl|Aclame:pro 1 MSRN-----KTRRAARAASAHVRTANTDAPTEHHTDRAAQAEVFSFGD--P--VEVLDRRELLDYVECMRMGQWYEPPMP 71 (368) Q Consensus 1 m~~~-----k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~--p--~~~~~~~~~~~~~~~~~~~~~~~~p~~ 71 (368) |+.. .+..+.-+ ..++. ...........+...++. | -+++..+. ++ T Consensus 1 ~~~~i~~~~g~~~~~~~---~~~~~-----~~~ia~~~~~~~~~~~~~~~p~~~~il~~~~----------~~------- 55 (491) T protein:vir:79 1 MSKGLWVSPTEFVKFGE---PDKSL-----SSQIATRARSIDFFALGMYLPNPDPVLKALG----------KD------- 55 (491) T ss_pred CCCeeeCCCCCcccccc---cchhH-----HHHHhhhccccccccccccCcchhHHHhhcc----------CC------- Confidence 5532 11111100 00000 000000000011111111 1 11111000 00 Q ss_pred HHHHHHHHHhcccccchhhhccch-------------------HHhhccCCCCcCHHHHHHHHHhHhhhCCeeEEEEecC Q lcl|Aclame:pro 72 WDGLARSFRAAAHHSSAVYVKRNI-------------------LVSTFIPHPLLSRATFERLVLDWQVFGNAYLERRENV 132 (368) Q Consensus 72 ~~~l~~~~r~~~~~~~~~~~~~~~-------------------~l~~~~~n~~~~~~~~~~~~~~~ll~Gnay~~i~r~~ 132 (368) +.....+. .+++...++...... .+....... .++.+-.-+.+.+.+|-+..+|++.. T Consensus 56 ~~~y~~m~-~D~~i~s~l~~Rk~av~~~~w~i~~~~~~~~~a~~i~e~l~~~--~~~~~i~~~lda~~~G~s~~Ei~w~~ 132 (491) T protein:vir:79 56 IRVYRELR-ADAHVGGCVRRRKAAVKALEWGLDRGKAKSRVAKSIADVFADL--DLSRIATEMLDAVLYGYQPMEITWGK 132 (491) T ss_pred HHHHHHHh-hChHHHHHHHHHHHHHhCCCcEEecCCCCHHHHHHHHHHHhcC--CHHHHHHHHHHhhhhcceeEEEEEee Confidence 00011111 111111111111000 000000010 11112222346678999999998654 Q ss_pred C---cceEEEEEecccccccccCCCeeEEEeCC-ceEEEEcCccEEEecCCCCcCCccccchhhHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 133 L---GGTIRLDTPLAKYVRRGLDLNTYFFVQNW-QQPYTFAAGSVFHLQEPDINQEVYGLPEYLSALNATWLNESATLFR 208 (368) Q Consensus 133 ~---G~~~~L~~l~p~~v~~~~~~~~~~~~~~~-~~~~~~~~~dviH~r~~~~~~~~~G~spi~~a~~~i~~~~~a~~~~ 208 (368) . -.|..|.++++.++.....+...+....+ .....+++...|++++....+..||.+.+..+......-....++. T Consensus 133 ~~g~~~~~~l~~r~~~~f~~d~~~~l~l~~~~~~~~g~~lp~~k~i~~~~~~~~g~p~g~gLl~~~~w~~~fK~~~~~~w 212 (491) T protein:vir:79 133 VGNYIVPIDVVGKPADWFVYDPENQLRFRSKEHWVQGEELPARKFLVPRQEATYLNPYGFPDLSMCFWPTTFKKGGLKFW 212 (491) T ss_pred cCCeeeEEeeeeecccceeeccCCceEEeecCCCCCceeecCCCeEEEEecCCCCCcccchhHHHHHHHHHHHHhhHHHH Confidence 3 34678999999999887766555544433 4557777877776665544567899999999999999999999999 Q ss_pred HHHHhccCCCceeEEeCCCCccHHHHHHHHHHHHHhccccccccccccccCccccccccccccc-hhhHHHHHHHHHHHH Q lcl|Aclame:pro 209 RRYYKNGSHAGFILYMTDAAQKQEDVDTLREAMKSAKGPGNFRNLFMYAPNGKKDGIQLLPVSE-VAAKDEFWNIKNVTR 287 (368) Q Consensus 209 ~~~f~ng~~p~gil~~~~~~l~~e~~~~~k~~~~~~~g~~n~~~~~~l~~~g~~~g~~~~pl~~-~~~d~qf~e~~~~~~ 287 (368) ..|...-++|--+.+++. ..++++++.+.+.+.+.. .+++ ++ .|.+ ..++++..+. +..-..|.+..++.. T Consensus 213 ~~f~E~~G~P~~igky~~-~a~~~ek~~l~~al~~~~--~~a~--~v-iP~~--~~ie~~ea~~~~g~~~~y~~li~~~d 284 (491) T protein:vir:79 213 VQFTEKYGSPMLVGKHPR-SASDAETNLLLDRLEDMV--QDAV--AV-IPDD--SSIEIKEAAGKSGSADVYERLLHFCR 284 (491) T ss_pred HHHHHHcCCCeEEEecCC-CCCHHHHHHHHHHHHHHh--cCeE--EE-ecCC--ceeEEEeccCCCCChhHHHHHHHHHH Confidence 999999999998888864 457888888877777652 2222 22 2222 3456655442 222334777788888 Q ss_pred HHHHHHhCCChHHhcccc--cccccccCHHHHHH----------HHHHHHHHHHHHHHHHHHhhcCcceEeechhhhhcC Q lcl|Aclame:pro 288 DDQLAAHRVPPQLMGIIP--NNTGGFGDVEKAAM----------VFARNEVKPLQDRLLAINDWIGDEVVRFAPYALGGH 355 (368) Q Consensus 288 ~~Ia~~fgVPp~~lg~~~--~~~~~~sn~e~~~~----------~f~~~tl~P~~~~ie~l~~~l~~~~~~F~~~~Llr~ 355 (368) .+|+.+. +|..- +++++++..+..+. .++..+|.-++..+-.+|-. +....+|...... - T Consensus 285 ~~Isk~i------LGqtlTt~~~gs~a~~~vh~~v~~~i~~~D~~~i~~tln~li~~l~~~N~~-~~~~p~f~~~e~e-e 356 (491) T protein:vir:79 285 GEVSIAL------LGQNQTTEATSTRASAQAGLEVTDDIRDGDKAIVVEAMNMLIRWICDLNFD-GAARPVFDMWEQE-Q 356 (491) T ss_pred HHHHHHH------hhhhhccCcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-CCCcceEeecCcC-c Confidence 8888876 44322 23344543333222 22333333222223333321 1122344433322 1 Q ss_pred ChhhhhhhhhhcC Q lcl|Aclame:pro 356 DQPAAAPGGQRSA 368 (368) Q Consensus 356 D~~~ra~~~~~~~ 368 (368) +.+.+|++.++-+ T Consensus 357 ~~~~~a~~~~~L~ 369 (491) T protein:vir:79 357 VDEIQAGRDEKLT 369 (491) T ss_pred hhHHHHHHHHHHH Confidence 2244555555544 No 122 >protein:vir:389 Length: 530 # NCBI annotation: gp4 # Family: family:all:47 # MgeID: mge:325 # MgeName: N15 # Cross-refs: genbank:acc:NP_046899;genbank:gi:9630468;genbank:GeneID:1261643 Probab=98.76 E-value=4.9e-09 Score=66.15 Aligned_cols=353 Identities=8% Similarity=-0.079 Sum_probs=157.8 Q ss_pred CCcCC-CCccccccccccccccCCCcchhhccccCceEEEECCCceeccChHHHHHHHHHH--hc-cchhcccccHHHHH Q lcl|Aclame:pro 1 MSRNK-TRRAARAASAHVRTANTDAPTEHHTDRAAQAEVFSFGDPVEVLDRRELLDYVECM--RM-GQWYEPPMPWDGLA 76 (368) Q Consensus 1 m~~~k-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~--~~-~~~~~~p~~~~~l~ 76 (368) |..+. ....++.+. +.. .+.-..+........-|. |...-...++....... +. .-+...|+....+. T Consensus 1 ~~~~~~~~~~~~~~~---~~~--~~~~~~a~~~~~~~~~w~---~~~~s~~~~i~~~~~~lr~RaRdl~rNn~~a~~av~ 72 (530) T protein:vir:38 1 MKIPSLVGPDGKTSL---REY--AGYHGGGGGFGGQLRGWN---PPSESADAALLPNYSRGNARADDLVRNNGYAANAVQ 72 (530) T ss_pred CccceeecCccccch---HHH--hhhhcccCCCCCcccccc---cCCCCHHHHHHHHHHHHHHHHHHHHhcChHHHHHHH Confidence 44321 101111110 000 000000001111111111 11100111111111100 00 11223344444444 Q ss_pred HHHHhcccccchhhhccc---------------------hHHhhccCC------CCcCHHHHHH-HHHhHhhhCCeeEEE Q lcl|Aclame:pro 77 RSFRAAAHHSSAVYVKRN---------------------ILVSTFIPH------PLLSRATFER-LVLDWQVFGNAYLER 128 (368) Q Consensus 77 ~~~r~~~~~~~~~~~~~~---------------------~~l~~~~~n------~~~~~~~~~~-~~~~~ll~Gnay~~i 128 (368) .+.......|-....+.+ +..-...++ ...++..++. ++..++..|.+|+.+ T Consensus 73 ~~~~nvVG~Gi~~~~~p~~~~l~~~~~~~~~~~~~ie~~w~~W~~~~~~~~D~~g~~~f~~~q~l~~r~~~~dGE~~~~~ 152 (530) T protein:vir:38 73 LHQDHIVGSFFRLSYRPSWRYLGINEEDSRAFSRDVEAAWNEYAEDDFCGIDAERKRTFTMMIREGVAMHAFNGELCVQA 152 (530) T ss_pred HHHHHhhCCCceeeeccchhhcCCCHhHHHHHHHHHHHHHHHhhcCCCcEEeeeccCCHHHHHHHHHHHHhhCCceEEEe Confidence 444433322322221110 000001122 1234544544 457889999999998 Q ss_pred EecCC-c--ceEEEEEecccccccccC---CC---------------eeEEEeC--Cc----------eEEEEcCccEEE Q lcl|Aclame:pro 129 RENVL-G--GTIRLDTPLAKYVRRGLD---LN---------------TYFFVQN--WQ----------QPYTFAAGSVFH 175 (368) Q Consensus 129 ~r~~~-G--~~~~L~~l~p~~v~~~~~---~~---------------~~~~~~~--~~----------~~~~~~~~dviH 175 (368) .+... | .++.|..|+|+++....+ +. .|+.+.. .+ .....++++||| T Consensus 153 ~~~~~~g~~~~~~lq~ie~d~l~~~~~~~~~~~i~~GIe~d~~Gr~~aY~i~~~~~~~~~~~~~~~~~~~~~v~a~~vlH 232 (530) T protein:vir:38 153 TWDSDSTRLFRTQFKMVSPKRVSNPNNIGDTRNCRAGVKINDSGAALGYYVSDDGYPGWMAQNWTYIPRELPGGRPSFIH 232 (530) T ss_pred eeccCCCCccceEEEEechhhcCCCCCCCCCCeeEeeeEECCCCceEEEEEeeccCCCccccccceeeeeeccChhHeEe Confidence 86543 3 367899999887753211 11 1444322 11 113345669999 Q ss_pred ecCCCCcCCccccchhhHHHHHHHHHHHHHHHHHHHHhccCCCceeEEeCCCCc----------cHHHHHHHHHHHHHhc Q lcl|Aclame:pro 176 LQEPDINQEVYGLPEYLSALNATWLNESATLFRRRYYKNGSHAGFILYMTDAAQ----------KQEDVDTLREAMKSAK 245 (368) Q Consensus 176 ~r~~~~~~~~~G~spi~~a~~~i~~~~~a~~~~~~~f~ng~~p~gil~~~~~~l----------~~e~~~~~k~~~~~~~ 245 (368) +......+...|+|.+..+...+.....-++....--+=.+.-.++|+.+.+.. .+++...+........ T Consensus 233 ~f~~~r~gQ~RGis~lapvl~~l~~l~~y~dael~~a~i~A~~a~fi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (530) T protein:vir:38 233 VFEPMEDGQTRGANAFYSVMEQMKMLDTLQNTQLQSAIVKAMYAATIESELDTQSAMDFILGADNKEQQSKLTGWLGEMA 312 (530) T ss_pred eccccCCCcccCCchHHHHHHHHHHHhHHHHHHHHHHHHhhhheeeeeccCCccccccccccCCcccccccccccchhhh Confidence 998776678899999988888777665555555444455566667776432110 1111111211111111 Q ss_pred cc-------cccccccccccCccccccccccccchhhHHHHHHHHHHHHHHHHHHhCCChHHh-cccccccccccCHHHH Q lcl|Aclame:pro 246 GP-------GNFRNLFMYAPNGKKDGIQLLPVSEVAAKDEFWNIKNVTRDDQLAAHRVPPQLM-GIIPNNTGGFGDVEKA 317 (368) Q Consensus 246 g~-------~n~~~~~~l~~~g~~~g~~~~pl~~~~~d~qf~e~~~~~~~~Ia~~fgVPp~~l-g~~~~~~~~~sn~e~~ 317 (368) +. -..|.+..| ..|-+++.+..+-.-.+|.+..+.....||+.+|||-++| |..++ .|||++.+. T Consensus 313 ~~~~~~~~~l~pG~i~~L-----~pGe~i~~~~p~~p~~~~~~f~~~~lr~iaaglGi~ye~lt~D~s~--~nYSS~R~~ 385 (530) T protein:vir:38 313 AYYSAAPVRLGGARVPHL-----LPGDSLNLQSAQDTDNGYSTFEQSLLRYIAAGLGVSYEQLSRNYSQ--MSYSTARAS 385 (530) T ss_pred hcccccceeccCceeeec-----CCCCeeeeeCCCCCCCCHHHHHHHHHHHHHhhcCCCHHHHhccccc--ccHHHHHHH Confidence 10 123333333 2344455555444456788889999999999999998887 55433 578877666 Q ss_pred HHHHHHH-----------HHHHHHHHH-HH--HHhhcC-cc--e------------EeechhhhhcCChhhhh--hhhhh Q lcl|Aclame:pro 318 AMVFARN-----------EVKPLQDRL-LA--INDWIG-DE--V------------VRFAPYALGGHDQPAAA--PGGQR 366 (368) Q Consensus 318 ~~~f~~~-----------tl~P~~~~i-e~--l~~~l~-~~--~------------~~F~~~~Llr~D~~~ra--~~~~~ 366 (368) ...|.+. -+.|+..+| ++ ++-.+. +. . ++|-.-...--|+.-.+ ...+- T Consensus 386 ~~e~~r~~~~~q~~~~~~~~~pi~~~wl~~av~~G~i~~p~~~~~~~~~~~~a~~~~~w~~p~~~~iDP~Ke~~a~~~~i 465 (530) T protein:vir:38 386 ANESWAYFMGRRKFVASRQACQMFLCWLEEAIVRRVVTLPSKARFSFQEARTAWGNANWIGSGRMAIDGLKEVQEAVMLI 465 (530) T ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHcCCccCCCCCCCCchhhHHhhhceeeecCCccccChHHHHHHHHHHH Confidence 5555443 344444433 22 222221 11 0 12222223333554332 22222 Q ss_pred cC Q lcl|Aclame:pro 367 SA 368 (368) Q Consensus 367 ~~ 368 (368) .+ T Consensus 466 ~~ 467 (530) T protein:vir:38 466 EA 467 (530) T ss_pred Hc Confidence 22 No 123 >protein:vir:6382 Length: 553 # NCBI annotation: portal protein Lambda B # Family: family:all:47 # MgeID: mge:133 # MgeName: BcepNazgul # Cross-refs: genbank:acc:NP_918995;genbank:gi:34610170;genbank:GeneID:2559575 Probab=98.73 E-value=5.6e-09 Score=65.81 Aligned_cols=356 Identities=8% Similarity=-0.016 Sum_probs=160.4 Q ss_pred CCcCCCCccccccccccc--cccCCCcchhhccccCceEEEECCCceeccChHHHHHHHHHH--hc-cchhcccccHHHH Q lcl|Aclame:pro 1 MSRNKTRRAARAASAHVR--TANTDAPTEHHTDRAAQAEVFSFGDPVEVLDRRELLDYVECM--RM-GQWYEPPMPWDGL 75 (368) Q Consensus 1 m~~~k~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~--~~-~~~~~~p~~~~~l 75 (368) |=+...+..+..+..... +......-..+........-| .|.......++....... +. .-+...|+....+ T Consensus 1 m~~~~~r~~~~~a~~~~~~~~~~~~~~y~gA~~~~r~~~~w---~~~~~s~~~~~~~~~~~lr~RaRdL~rNn~~a~~av 77 (553) T protein:vir:63 1 MTKVTVRKLSEVTSGRPEQSASLGGGGLEGASRLSRETVSW---NPSLRSPDALINPLKRIADARGRDMADNDGFTNGAV 77 (553) T ss_pred CcchhhhhhcccccccchhhhhhhcccccccccCCCccccc---ccCCCChHHHHHHHHHHHHHHHHHHHhcChHHHHHH Confidence 665544433322221110 000000000000000011111 121111111221111110 00 1122334444444 Q ss_pred HHHHHhcccccchhhhccchH----------------------HhhccCC------CCcCHHHHHHHH-HhHhhhCCeeE Q lcl|Aclame:pro 76 ARSFRAAAHHSSAVYVKRNIL----------------------VSTFIPH------PLLSRATFERLV-LDWQVFGNAYL 126 (368) Q Consensus 76 ~~~~r~~~~~~~~~~~~~~~~----------------------l~~~~~n------~~~~~~~~~~~~-~~~ll~Gnay~ 126 (368) ..+.......|-....+.+.. .-...++ ...+++.++.++ ..++..|.+|+ T Consensus 78 ~~~~~nvVG~Gi~~~~~~~~~~l~g~~~~~~~~~~~~ie~~w~~wa~~~~~~~D~~g~~~f~~~q~l~~r~~~~dGE~~~ 157 (553) T protein:vir:63 78 GYQRDSIVGAQYRLNSMPDINVIPGATEEWAEEYQTIVEAKFELYAESLACYIDNAAISTFTGLIRLGVVGYVKTGEVLA 157 (553) T ss_pred HHHHHhhccCCceeeeccchhhhcCCCHHHHHHHHHHHHHHHHHhcCCccceeeccccCCHHHHHHHHHHHHHhCCceEE Confidence 444444333333332222111 0011111 223455555554 68899999999 Q ss_pred EEEecCC-c--ceEEEEEecccccccccCC---C---------------eeEEEeC-Cc----------------eEEEE Q lcl|Aclame:pro 127 ERRENVL-G--GTIRLDTPLAKYVRRGLDL---N---------------TYFFVQN-WQ----------------QPYTF 168 (368) Q Consensus 127 ~i~r~~~-G--~~~~L~~l~p~~v~~~~~~---~---------------~~~~~~~-~~----------------~~~~~ 168 (368) .+.+... | .+..|..|+|+++....+. + .|+.... -| ....+ T Consensus 158 ~~~~~~~~~~~~~~~lq~ie~drl~~~~~~~~~~~i~~GVE~d~~Gr~vaY~i~~~hPgd~~~~~~~~~~~~r~~~~~~v 237 (553) T protein:vir:63 158 TAEWDRAANRPYATCFQMVSTDRLSNPYQQLDTPTLRRGVQYDKRGRPQGYWIQVAHPGDLYQMAPDMYKWKFVQQSKPW 237 (553) T ss_pred EeeeccCCCCcccceEEEechhhcCCCCCCCCCCeeEeeeEECCCCceEEEEeeccCCCccccccccccceeeecccccc Confidence 8875432 2 3578889998887533221 0 1332221 01 11246 Q ss_pred cCccEEEecCCCCcCCccccchhhHHHHHHHHHHHHHHHHHHHHhccCCCceeEEeCCCCccHHHHHHHHHHHH------ Q lcl|Aclame:pro 169 AAGSVFHLQEPDINQEVYGLPEYLSALNATWLNESATLFRRRYYKNGSHAGFILYMTDAAQKQEDVDTLREAMK------ 242 (368) Q Consensus 169 ~~~dviH~r~~~~~~~~~G~spi~~a~~~i~~~~~a~~~~~~~f~ng~~p~gil~~~~~~l~~e~~~~~k~~~~------ 242 (368) ++++|||+......+..-|+|.+..+...+.-...-++....--+=.+.-.++|+.+. -++...+.+..... T Consensus 238 ~a~~vlH~f~~~r~gQ~RGis~lapvl~~l~~l~~y~daeL~~a~i~A~~a~fi~~~~--~~~~~~~~~~~~~~~~~~~~ 315 (553) T protein:vir:63 238 GRRQVIHILEPREPDQSRGIADIVSGLKDMRMAKRFKEMSLQNAVINASYAAAIESEL--PPEFIHSQMSGGSPNADMVG 315 (553) T ss_pred ChhHheecccccCCCcccCCchHHHHHHHHHHHhHHHHHHHHHHHHhhhheeeeecCC--Chhhhhhhcccccccccccc Confidence 6889999998766678899999988887777665555554444444566677776432 12222222221110 Q ss_pred ----------Hhc-cc----cccccccccccCccccccccccccchhhHHHHHHHHHHHHHHHHHHhCCChHHh-ccccc Q lcl|Aclame:pro 243 ----------SAK-GP----GNFRNLFMYAPNGKKDGIQLLPVSEVAAKDEFWNIKNVTRDDQLAAHRVPPQLM-GIIPN 306 (368) Q Consensus 243 ----------~~~-g~----~n~~~~~~l~~~g~~~g~~~~pl~~~~~d~qf~e~~~~~~~~Ia~~fgVPp~~l-g~~~~ 306 (368) ... |. -+.|.+..|. .|-+++.+..+---.+|.+..+.....||+.+|||-+.| |..++ T Consensus 316 ~~~~~~~~~~~~~~~~~~~~l~pG~i~~L~-----pGe~i~~~~p~~p~~~~~~F~~~~lr~iaaglGi~Ye~lt~D~s~ 390 (553) T protein:vir:63 316 IFGKYMDALKAYVGGANNIQIDGAKIPHLF-----PGTKLNLKPMGTPGGVGSEFEASLNRHLASAFGMSYEEFTRDFSK 390 (553) T ss_pred cccccccccccccccccceeecCceeeecC-----CCCeeeecCCCCCCCCHHHHHHHHHHHHHhhcCCCHHHHhhhccc Confidence 000 00 1233333332 233444444443356788889999999999999998876 55433 Q ss_pred ccccccCHHHHHHHHHHH-----------HHHHHHHHHH-H--HHhhc--Ccce----------------Eeechhhhhc Q lcl|Aclame:pro 307 NTGGFGDVEKAAMVFARN-----------EVKPLQDRLL-A--INDWI--GDEV----------------VRFAPYALGG 354 (368) Q Consensus 307 ~~~~~sn~e~~~~~f~~~-----------tl~P~~~~ie-~--l~~~l--~~~~----------------~~F~~~~Llr 354 (368) .|||++.+....|.+. .+.|+...|. + ++-.+ +... ++|-.-...- T Consensus 391 --~nYSS~R~~~~e~~r~~~~~q~~~~~~~~~pi~~~wl~~a~l~G~i~~p~~~~~~~~~~p~~~~a~~~~~w~~p~~~~ 468 (553) T protein:vir:63 391 --ANYSSIQAGIAMTRRFLEGRKKMCADRLATEFFTLWLEEAIAAGEVPMPPGQTRDLFYQPLMKEALSKCEWIGASQGQ 468 (553) T ss_pred --ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccCCCcccchhhcchhhhhhhhceeeecCCccc Confidence 6888876555554443 3455444432 1 22222 1111 1122222222 Q ss_pred CChhhhhh--hhhhcC Q lcl|Aclame:pro 355 HDQPAAAP--GGQRSA 368 (368) Q Consensus 355 ~D~~~ra~--~~~~~~ 368 (368) .|+.-.+. ..+-.+ T Consensus 469 iDP~Ke~~A~~~~i~~ 484 (553) T protein:vir:63 469 IDQLKETQAAVMRIDA 484 (553) T ss_pred cChHHHHHHHHHHHHc Confidence 34432221 122222 No 124 >protein:vir:108215 Length: 469 # NCBI annotation: gp6 # Family: family:all:2372 # MgeID: mge:2004 # MgeName: Giles # Cross-refs: genbank:acc:YP_001552335;genbank:gi:160700655;genbank:GeneID:5758935 Probab=98.73 E-value=8e-08 Score=59.49 Aligned_cols=339 Identities=12% Similarity=0.012 Sum_probs=154.2 Q ss_pred CCcCCCCccccccccccccccC-CCcchhhccccCceEEEECCCceeccChHHHHHHH-HHHhccchhcccccHHHHHHH Q lcl|Aclame:pro 1 MSRNKTRRAARAASAHVRTANT-DAPTEHHTDRAAQAEVFSFGDPVEVLDRRELLDYV-ECMRMGQWYEPPMPWDGLARS 78 (368) Q Consensus 1 m~~~k~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~-~~~~~~~~~~~p~~~~~l~~~ 78 (368) |.-+.+ .++|. ..........+.....+.--+..+.|........+ .+......+..-+..+.+... T Consensus 1 ~~~~~~-----------~~~p~~~~g~~~~~~~~~~~~~~~~~e~~~~lr~~~~~~ly~~m~e~D~~i~s~l~~rk~av~ 69 (469) T protein:vir:10 1 MTERVK-----------TAAPVSEAGYVFGSGVVDGWTVWDPFEQTPELQWPQSVAVYSRMDNEDSRVTSLLEAISLPIR 69 (469) T ss_pred CCCccc-----------CCCCccchhhhhhcccccchhhccccccccccccccchHHHHHHHhhChHHHHHHHHHHHHHh Confidence 432211 11110 00000000000000000000001112111111111 111111111111110000000 Q ss_pred ---HHhcccccchhhhc--cchHHhhc------cCCC--CcC---HHHHHHHHHhHhhhCCeeEEEEecCC-----c--c Q lcl|Aclame:pro 79 ---FRAAAHHSSAVYVK--RNILVSTF------IPHP--LLS---RATFERLVLDWQVFGNAYLERRENVL-----G--G 135 (368) Q Consensus 79 ---~r~~~~~~~~~~~~--~~~~l~~~------~~n~--~~~---~~~~~~~~~~~ll~Gnay~~i~r~~~-----G--~ 135 (368) .+..+........+ +....... .+.+ .+. .+++..++.+.+.+|-++.++++... | . T Consensus 70 ~~~w~v~p~~~~~e~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~w~~~l~~~l~~a~~~G~s~~Eivw~~~~~~~dG~~~ 149 (469) T protein:vir:10 70 STPWRIRANGASDEVTEFVSRNLMVPIDGEDDVRNPGRSRGRFSWAEHLEEVTSPTLQFGHAVFEQVYRPRNQSPDGRFW 149 (469) T ss_pred cCCceEecCCCCHHHHHHHHHHHHhhhhhhhhhhhhhhhhccccHHHHHHHHHHHhhhhCceeeeeeeecccccCCCcee Confidence 01111111100000 00000000 0000 111 12233344456679999999987532 3 3 Q ss_pred eEEEEEecccccc---cccCCCeeEEE-------------eCCceEEEEcCccEEEecCCCCcCCccccchhhHHHHHHH Q lcl|Aclame:pro 136 TIRLDTPLAKYVR---RGLDLNTYFFV-------------QNWQQPYTFAAGSVFHLQEPDINQEVYGLPEYLSALNATW 199 (368) Q Consensus 136 ~~~L~~l~p~~v~---~~~~~~~~~~~-------------~~~~~~~~~~~~dviH~r~~~~~~~~~G~spi~~a~~~i~ 199 (368) +..|.+.++.++. ...++...... ..++....+++...|++++....+..||.|.+..+..... T Consensus 150 ~~~l~~rp~~~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lp~~k~i~~~~~~~~g~p~g~gLlr~~~~~~~ 229 (469) T protein:vir:10 150 LRKLAPRPQWTISKFNVAPDGGLESIEQIAPPARTRGSLYVANIAPPEIPVNRLVVYTRNKRPGQWQGKSILRSAYKHWL 229 (469) T ss_pred eeeeeecCcccceeeeeccCCceeeeeecCcccccccccccCCCCccccccCcEEEEEecCCCCCcccchhHHHHHHHHH Confidence 6677777776542 22222221111 1123345667777665555444567899999999999999 Q ss_pred HHHHHHHHHHHHHhccCCCceeEEeCCCCccHHHHHHHHHHHHHhccccccccccccccCccccccccccccchhhHHHH Q lcl|Aclame:pro 200 LNESATLFRRRYYKNGSHAGFILYMTDAAQKQEDVDTLREAMKSAKGPGNFRNLFMYAPNGKKDGIQLLPVSEVAAKDEF 279 (368) Q Consensus 200 ~~~~a~~~~~~~f~ng~~p~gil~~~~~~l~~e~~~~~k~~~~~~~g~~n~~~~~~l~~~g~~~g~~~~pl~~~~~d~qf 279 (368) .-....++...|...-++|--|.+++. ..++++++.+.+..++..++.+++.++ + .|++++-+..+.....| T Consensus 230 fK~~~~~~w~~f~EryG~P~~vgky~~-~a~~~ek~~l~~a~~~~~~g~~a~~ii---p----~~~~ie~~ea~g~~~~~ 301 (469) T protein:vir:10 230 LKDKLLRIEAATAERNGMGIPVGTASS-ATDEDEVRKMAALARSVRGGINAGVGL---A----QGQILELLGVSGNLPDI 301 (469) T ss_pred HHHHHHHHHHHHHHHcCCcceEEecCC-CCCHHHHHHHHHHHHHHhcCCceEEEc---c----CCceEEEeecCCCchHH Confidence 999999999999999899988888765 467888888888888776555554332 2 33444434444445568 Q ss_pred HHHHHHHHHHHHHHhCCChHHhcccc---cccccccCHHHHHHHHHHHHHHHHHHHHHH-HHhhc---------Cc--c- Q lcl|Aclame:pro 280 WNIKNVTRDDQLAAHRVPPQLMGIIP---NNTGGFGDVEKAAMVFARNEVKPLQDRLLA-INDWI---------GD--E- 343 (368) Q Consensus 280 ~e~~~~~~~~Ia~~fgVPp~~lg~~~---~~~~~~sn~e~~~~~f~~~tl~P~~~~ie~-l~~~l---------~~--~- 343 (368) .+.-++--.+|+++. +|..- .++++++-.+..+. .....+.-.++.|++ +|+.| ++ . T Consensus 302 ~~li~~~d~~Isk~i------LG~tlTs~~~gGS~a~~~vh~e-v~~d~~~sDa~~i~~tln~~li~~l~~lN~g~~~~~ 374 (469) T protein:vir:10 302 RRAIEGHDRSIALSG------LAHFLNLDGKGGSYALASVLED-PFTQAVHAYATSICRIANQHIIEDLVDINFGVDTPA 374 (469) T ss_pred HHHHHHHHHHHHHHH------hcccccccCccchhhHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCc Confidence 899999999999887 33321 12234433332222 223334444444442 44322 11 1 Q ss_pred -eEeechhhhhcCChhhhhhhhhhcC Q lcl|Aclame:pro 344 -VVRFAPYALGGHDQPAAAPGGQRSA 368 (368) Q Consensus 344 -~~~F~~~~Llr~D~~~ra~~~~~~~ 368 (368) .++|+ .. .-|.+..|+..++-+ T Consensus 375 P~~~~~--~~-e~~~~~~a~~i~~l~ 397 (469) T protein:vir:10 375 PVLTFD--PI-GSRQDLTAAAVKLLY 397 (469) T ss_pred cEEEec--CC-CCcHHHHHHHHHHHH Confidence 24444 22 234455555554432 No 125 >protein:vir:107880 Length: 491 # NCBI annotation: gp29 # Family: family:all:313 # MgeID: mge:1565 # MgeName: BcepMu # Cross-refs: genbank:acc:YP_024702;genbank:gi:48696939;genbank:GeneID:2845968 Probab=98.71 E-value=3.1e-08 Score=61.76 Aligned_cols=338 Identities=12% Similarity=0.099 Sum_probs=158.0 Q ss_pred CCcCC-----CCccccccccccccccCCCcchhhccccCceEEEECC-Cc---eeccChHH--HHHHHHHHhccchhccc Q lcl|Aclame:pro 1 MSRNK-----TRRAARAASAHVRTANTDAPTEHHTDRAAQAEVFSFG-DP---VEVLDRRE--LLDYVECMRMGQWYEPP 69 (368) Q Consensus 1 m~~~k-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~p---~~~~~~~~--~~~~~~~~~~~~~~~~p 69 (368) |+..= +..+..+.+. ..+ ... ++ .......+++| .| -++|..+. +..|-.+.+ ...+..- T Consensus 1 m~~~i~~~~g~p~~~~~~~~--~~~---~~i--a~-~~~~~~~~~~~~~~~~~~~iLr~~~~~~~~y~~m~~-D~~i~s~ 71 (491) T protein:vir:10 1 MSKGLWVSPTEFVTFGEPDK--SLS---SQI--AT-RARSIDFFALGMYLPNPDPVLKALGKDIRVYRELRA-DAHVGGC 71 (491) T ss_pred CCCceeCCCCCccCcccCCh--HHH---HHH--Hh-hhcccccccccCCccchHHHHHhcCCCHHHHHHHhh-ChHHHHH Confidence 55321 0000000000 000 000 00 00011111111 11 11221100 000101111 1111101 Q ss_pred ccHHHHHHH---HHhcccccchhhhccchHHhhccCCCCcCHHHHHHHHHhHhhhCCeeEEEEecCCc---ceEEEEEec Q lcl|Aclame:pro 70 MPWDGLARS---FRAAAHHSSAVYVKRNILVSTFIPHPLLSRATFERLVLDWQVFGNAYLERRENVLG---GTIRLDTPL 143 (368) Q Consensus 70 ~~~~~l~~~---~r~~~~~~~~~~~~~~~~l~~~~~n~~~~~~~~~~~~~~~ll~Gnay~~i~r~~~G---~~~~L~~l~ 143 (368) +.-+....+ ++..+...... ........ .... .++.+-.-+.+.+++|.+..+|++...| .|..|.+++ T Consensus 72 l~~Rk~av~~~~w~i~~~~~~~~--~~e~v~e~-l~~~--~~~~~l~~~lda~~~G~s~~Ei~w~~~~g~~~~~~l~~r~ 146 (491) T protein:vir:10 72 VRRRKAAVKALEWGLDRGKAKSR--VAKSIADV-FADL--DLSRIVTEMLDAVLYGYQPMEITWGKVGNYIVPIDVVGKP 146 (491) T ss_pred HHHHHHHHhCCCcEEecCCCCHH--HHHHHHHH-HhcC--CHHHHHHHHHHhhhhcceeEEEEEeecCCeeEEEEeeeec Confidence 100000000 00000000000 00000000 0010 1122222234667899999999875433 467899999 Q ss_pred ccccccccCCCeeEEEeCC-ceEEEEcCccEEEecCCCCcCCccccchhhHHHHHHHHHHHHHHHHHHHHhccCCCceeE Q lcl|Aclame:pro 144 AKYVRRGLDLNTYFFVQNW-QQPYTFAAGSVFHLQEPDINQEVYGLPEYLSALNATWLNESATLFRRRYYKNGSHAGFIL 222 (368) Q Consensus 144 p~~v~~~~~~~~~~~~~~~-~~~~~~~~~dviH~r~~~~~~~~~G~spi~~a~~~i~~~~~a~~~~~~~f~ng~~p~gil 222 (368) +.++.....+...+....+ .....+++...|++++....+..||.+.+..+......-....++...|...-++|--+. T Consensus 147 ~~~f~~d~~~~l~~~~~~~~~~g~~l~~~k~i~~~~~~~~~~p~g~gLl~~~~w~~~fK~~~~~~w~~f~E~yG~P~~ig 226 (491) T protein:vir:10 147 ADWFVYDPENQLRFRSKDHWMQGEELPARKFLVPRQEATYLNPYGFPDLSMCFWPTTFKKGGLKFWVQFTEKYGSPMLVG 226 (491) T ss_pred ccceeeccCCceEEecCCCCCCcceecCCCEEEEEecCCCCCcccchhHHHHHHHHHHHHHHHHHHHHHHHHcCCCeEEE Confidence 9999887766655554443 455677777766666544456789999999999999999999999999999999999888 Q ss_pred EeCCCCccHHHHHHHHHHHHHhccccccccccccccCccccccccccccchhh-HHHHHHHHHHHHHHHHHHhCCChHHh Q lcl|Aclame:pro 223 YMTDAAQKQEDVDTLREAMKSAKGPGNFRNLFMYAPNGKKDGIQLLPVSEVAA-KDEFWNIKNVTRDDQLAAHRVPPQLM 301 (368) Q Consensus 223 ~~~~~~l~~e~~~~~k~~~~~~~g~~n~~~~~~l~~~g~~~g~~~~pl~~~~~-d~qf~e~~~~~~~~Ia~~fgVPp~~l 301 (368) +++. ..++++++++.+.+.+..+ +++ ++ .+.+ ..++++..+.+.. -.-|.+.-++-.++|+++. + T Consensus 227 ky~~-~a~~~ek~~l~~al~~~~~--~a~--~v-iP~~--~~ie~~ea~~~~g~~~~y~~li~~~d~~Isk~i------L 292 (491) T protein:vir:10 227 KHPR-SASDGEKNLLLDCLEDMVQ--DAV--AV-VPDD--SSIEIKEAAGKTGSADVYERLLHFCRGEVSIAL------L 292 (491) T ss_pred ecCC-CCCHHHHHHHHHHHHHHhc--CcE--EE-ecCC--ceeEEEecCCCCCChhHHHHHHHHHHHHHHHHH------h Confidence 8865 3578888888887776522 222 22 2222 3455655443222 2347777788888888874 4 Q ss_pred cccc--cccccccCHHHHHHH----------HHHHHHHHHHHHHHHHHhhcCcceEeechhhhhcCChhhhhhhhhhcC Q lcl|Aclame:pro 302 GIIP--NNTGGFGDVEKAAMV----------FARNEVKPLQDRLLAINDWIGDEVVRFAPYALGGHDQPAAAPGGQRSA 368 (368) Q Consensus 302 g~~~--~~~~~~sn~e~~~~~----------f~~~tl~P~~~~ie~l~~~l~~~~~~F~~~~Llr~D~~~ra~~~~~~~ 368 (368) |..- +++++++..+..... ++..+|.-++..+-.+|-. +....+|...... -+.+++|+.-.+-+ T Consensus 293 GqtlTt~~~gs~a~~~vh~~v~~di~~~D~~~i~~tln~li~~l~~~N~~-~~~~p~f~~~~~~-e~~~~~a~~~~~L~ 369 (491) T protein:vir:10 293 GQNQTTEATSTRASAQAGLEVTDDIRDGDKAVVSEAMNMLIRWICDLNFD-GADRPVFDMWEQE-QVDEIQAGRDQKLT 369 (491) T ss_pred hhhcccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-CCCcceEEecCcC-chhHHHHHHHHHHH Confidence 4322 223444333222222 2333333222222233321 1122233322221 23356666655544 No 126 >protein:vir:99853 Length: 488 # NCBI annotation: portal protein # Family: family:all:313 # MgeID: mge:1480 # MgeName: B3 # Cross-refs: genbank:acc:YP_164068;genbank:gi:56692600;genbank:GeneID:3192581 Probab=98.67 E-value=3.5e-08 Score=61.48 Aligned_cols=334 Identities=14% Similarity=0.069 Sum_probs=158.2 Q ss_pred CCcCCCCccccccccccccccCCCcchhhccccCceEEEECCCceeccChHH---HHHHHHHHhccchhcccccHHHHHH Q lcl|Aclame:pro 1 MSRNKTRRAARAASAHVRTANTDAPTEHHTDRAAQAEVFSFGDPVEVLDRRE---LLDYVECMRMGQWYEPPMPWDGLAR 77 (368) Q Consensus 1 m~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~p~~~~~~~~---~~~~~~~~~~~~~~~~p~~~~~l~~ 77 (368) ++ +..-.....+ .. ...+... ...+..+..++. ++..+. +..|-.+.++. .+..-+..+.... T Consensus 1 v~-------~~~l~~e~at-~~--~~~d~~~--~~~~~l~~~~~~-il~~a~~g~~~~y~~l~~D~-~i~s~l~~rk~av 66 (488) T protein:vir:99 1 ME-------KPALGREIAT-SG--DGRDITR--PFISGLQVPNDS-ILQRRGGNDLRVYEEILSDA-QVKTVWGQRQLAV 66 (488) T ss_pred CC-------ccchhHHHHH-HH--hhhhhhc--cccCCCCCCChH-HHHhhccCCHHHHHHHhhCh-HHHHHHHHHHHHH Confidence 21 1110000000 00 0000100 000000101111 111000 11121222211 1111111000000 Q ss_pred H---HHhcccccchhhhccchHHhhccCCCCcCHHHHHHHHHhHhhhCCeeEEEEecCC---cceEEEEEeccccccccc Q lcl|Aclame:pro 78 S---FRAAAHHSSAVYVKRNILVSTFIPHPLLSRATFERLVLDWQVFGNAYLERRENVL---GGTIRLDTPLAKYVRRGL 151 (368) Q Consensus 78 ~---~r~~~~~~~~~~~~~~~~l~~~~~n~~~~~~~~~~~~~~~ll~Gnay~~i~r~~~---G~~~~L~~l~p~~v~~~~ 151 (368) . .+..+..+.....+.-..+.....++ .++.+-.-+++.+++|.++.++++..+ -.|..|.+.++.++.... T Consensus 67 ~~~~w~i~p~~~~~~~~~~ae~v~~~l~~~--~~~~~l~~~lda~~~G~s~~Ei~w~~~~g~~~~~~l~~r~~~~f~~d~ 144 (488) T protein:vir:99 67 VSREWKVEAGGDRPIDQAAAEHLEQQLQRV--GWDRVTSKMLFGVFYGYAVSELIYGRDDRYITLEAIKVRNRRRFRYDQ 144 (488) T ss_pred hcCCceEEcCCCChHHHHHHHHHHHHHhCC--CHHHHHHHHHhhhhhcceeEEEEEeecCCeeeEeeeeeecccceeecC Confidence 0 00000001000000001111111121 122222233466789999999987543 356789999999888776 Q ss_pred CCCeeEEEeCC-ceEEEEcCc-c-EEEecCCCCcCCccccchhhHHHHHHHHHHHHHHHHHHHHhccCCCceeEEeCCCC Q lcl|Aclame:pro 152 DLNTYFFVQNW-QQPYTFAAG-S-VFHLQEPDINQEVYGLPEYLSALNATWLNESATLFRRRYYKNGSHAGFILYMTDAA 228 (368) Q Consensus 152 ~~~~~~~~~~~-~~~~~~~~~-d-viH~r~~~~~~~~~G~spi~~a~~~i~~~~~a~~~~~~~f~ng~~p~gil~~~~~~ 228 (368) ++...+....+ .....++.. . |+|..... .+..||.|.+..+......-....++...|...-++|--+.+++... T Consensus 145 ~~~l~~~~~~~~~~g~~lp~~~~~i~~~~~~~-~g~p~g~gLl~~~~w~~~fK~~~~~~w~~f~E~yG~P~~igky~~~~ 223 (488) T protein:vir:99 145 DGGLRLLTPNNMFEGEPCPAPYFWHFSTGADN-DDEPYGLGLAHWLYWPVFFKRNGIKFWLIFLDKFGMPTAVGRYDDKT 223 (488) T ss_pred CCceEEeccCCCCCccccccCceEEEEeecCC-CCCcccchHHHHHHHHHHHHHhhHHHHHHHHHHcCCceeeeecCCCC Confidence 65554444332 234555432 2 45554444 35779999999999999999999999999999999998888876444 Q ss_pred ccHHHHHHHHHHHHHhccccccccccccccCccccccccccccchhhHHHHHHHHHHHHHHHHHHhCCChHHhcccc--- Q lcl|Aclame:pro 229 QKQEDVDTLREAMKSAKGPGNFRNLFMYAPNGKKDGIQLLPVSEVAAKDEFWNIKNVTRDDQLAAHRVPPQLMGIIP--- 305 (368) Q Consensus 229 l~~e~~~~~k~~~~~~~g~~n~~~~~~l~~~g~~~g~~~~pl~~~~~d~qf~e~~~~~~~~Ia~~fgVPp~~lg~~~--- 305 (368) -++++++++.+.+.+..+ +++ +++ |.+ ..+++...+... -.-|.+..++-.++|+++. +|..- T Consensus 224 a~~~ek~~l~~av~~~~~--~~~--~vi-P~~--~~ie~~ea~~~~-~~~~~~li~~~d~~Isk~i------LGqtlts~ 289 (488) T protein:vir:99 224 ATPEDKAKLLAALHAIQT--DSA--IIM-PAG--MQAELLEAGRSG-TADYKTLHDTMDATIAKVG------LGQVASTQ 289 (488) T ss_pred CCHHHHHHHHHHHHHHhc--CcE--EEe-cCC--ceeEEeecCCCC-hHHHHHHHHHHHHHHHHHH------hhhhhccc Confidence 578888888777766522 222 222 222 346666554332 2358888888999998884 33221 Q ss_pred cccccccCHHHHHHHHHHHHHHHHHHHHHH-HHhhcCcc------------eEeechhhhhcCChhhhhhhhhhcC Q lcl|Aclame:pro 306 NNTGGFGDVEKAAMVFARNEVKPLQDRLLA-INDWIGDE------------VVRFAPYALGGHDQPAAAPGGQRSA 368 (368) Q Consensus 306 ~~~~~~sn~e~~~~~f~~~tl~P~~~~ie~-l~~~l~~~------------~~~F~~~~Llr~D~~~ra~~~~~~~ 368 (368) .++++++..+.... -..+.+.-.++.|++ +|+.|-+. ++.|+. ...-|.+++|++-++-+ T Consensus 290 ~~~Gs~a~~~vh~~-v~~d~~~aDa~~i~~tln~~li~~l~~~N~~~~~~p~~~~~~--~e~edl~~~a~~~~~l~ 362 (488) T protein:vir:99 290 GTPGRLGNDDLQAD-VRLDLVKADADLICESFNLGPARWLTEWNFPGAQPPRVYRVI--EEPEDITAKAERDEKVF 362 (488) T ss_pred ccccchhhHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHhCcCCcCCceeEecC--CCcccHHHHHHHHHHHH Confidence 12233433333222 233334455555543 44433111 234432 23456677777666644 No 127 >protein:vir:96738 Length: 505 # NCBI annotation: putative phage-related protein # Family: family:all:47 # MgeID: mge:1628 # MgeName: VP882 # Cross-refs: genbank:acc:YP_001039817;genbank:gi:126010916;genbank:GeneID:5076248 Probab=98.66 E-value=2.8e-09 Score=67.44 Aligned_cols=353 Identities=9% Similarity=-0.036 Sum_probs=166.3 Q ss_pred CCcCCCCccccccccccccccC---------CCcchhhccccCceEEEECCCceeccChHHHHHHHHHH--hccc-hhcc Q lcl|Aclame:pro 1 MSRNKTRRAARAASAHVRTANT---------DAPTEHHTDRAAQAEVFSFGDPVEVLDRRELLDYVECM--RMGQ-WYEP 68 (368) Q Consensus 1 m~~~k~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~--~~~~-~~~~ 68 (368) |.+.+.+..-..+.- ....+. .+.. +.........|.+ .|.......++....... +.-+ +... T Consensus 1 ~~r~~~~~~~~dr~i-~~~~~~~~~~~~~~~~~y~--aa~~~r~~~~w~~-~~~~~s~~~~i~~~~~~lr~RaRdL~rNn 76 (505) T protein:vir:96 1 MKRAEKKPSLAQRMV-NWAWYRYVEPQKNAARAFE--AARRDRLGKAWLR-RASRLSADEEIYADLASLVQRAREQSINN 76 (505) T ss_pred CCCCccccchhhccc-chhhhhhHHHHHHhhhhcc--cccCCCccccccC-CCCCCChHHHHHHHHHHHHHHHHHHHhcC Confidence 776654443211110 000000 0000 1111112222221 121111111111111100 1111 2233 Q ss_pred cccHHHHHHHHHhccc-ccchhhhccc-----------------hHHhhccCCC----CcCHHHHHH-HHHhHhhhCCee Q lcl|Aclame:pro 69 PMPWDGLARSFRAAAH-HSSAVYVKRN-----------------ILVSTFIPHP----LLSRATFER-LVLDWQVFGNAY 125 (368) Q Consensus 69 p~~~~~l~~~~r~~~~-~~~~~~~~~~-----------------~~l~~~~~n~----~~~~~~~~~-~~~~~ll~Gnay 125 (368) |+....+..+...... .|.....+.. +..-...+|+ ..+++.++. ++..++..|.+| T Consensus 77 ~~a~~av~~~~~nvVG~~Gi~~~~~~~~~~~~~~~~~~~~ie~~w~~Wa~~~~~D~~g~~~f~~lq~l~~r~~~~dGE~f 156 (505) T protein:vir:96 77 PYAKRFYQLLKNNVIGPKGMTFQSRVKRRNGKPDDRANTLIEGNWQQWIKKGNCDVTGRYHFVTLLHLWMETLARDGEVL 156 (505) T ss_pred hHHHHHHHHHHHHhcCCCcceeeecCCcccccccHHHHHHHHHHHHHhcCCcCcceeccCCHHHHHHHHHHHHhhCCceE Confidence 4444444444443332 1221111100 1111112232 234554554 557889999999 Q ss_pred EEEEecC-CcceEEEEEecccccccccC-----CC---------------eeEEEeC--C----------ceEEEEcCcc Q lcl|Aclame:pro 126 LERRENV-LGGTIRLDTPLAKYVRRGLD-----LN---------------TYFFVQN--W----------QQPYTFAAGS 172 (368) Q Consensus 126 ~~i~r~~-~G~~~~L~~l~p~~v~~~~~-----~~---------------~~~~~~~--~----------~~~~~~~~~d 172 (368) +.+.+.. ...++.|..|+|+++....+ +. .|+.... + .....+++++ T Consensus 157 ~~~~~~~~~~~~~~lqliepd~l~~~~n~~~~~~~~i~~GIe~d~~Gr~~aY~i~~~hPgd~~~~~~~~~~~~~rvpa~~ 236 (505) T protein:vir:96 157 VREHRGYPNKWGYALQILECDRLDLNYNADLQNGNRIRMSIELDAWERPVAYHLLVNHPGDNSYCYHYAGQTYERVPADE 236 (505) T ss_pred EEEeecCCCCcceEEEEechhhcCCCCCcccCCcCeEEeceEECCCCceEEEEEeecCCCccccccccccccccccCHhH Confidence 9887643 23467899999888753221 11 1333221 0 1234578889 Q ss_pred EEEecCCCCcCCccccchhhHHHHHHHHHHHHHHHHHHHHhccCCCceeEEeCCCCccHHHHHHHHHHHHHhcccccccc Q lcl|Aclame:pro 173 VFHLQEPDINQEVYGLPEYLSALNATWLNESATLFRRRYYKNGSHAGFILYMTDAAQKQEDVDTLREAMKSAKGPGNFRN 252 (368) Q Consensus 173 viH~r~~~~~~~~~G~spi~~a~~~i~~~~~a~~~~~~~f~ng~~p~gil~~~~~~l~~e~~~~~k~~~~~~~g~~n~~~ 252 (368) |||+..+...+..-|+|.+..+...+.-...-++....--+=.+.-.++|+.+.+...+...+. .....-.-..|. T Consensus 237 vlH~f~~~r~gQ~RGis~lapvl~~l~~l~~y~dael~~a~i~A~~a~fi~~~~~~~~~~~~~~----~~~~~~~l~pG~ 312 (505) T protein:vir:96 237 IIHTFVPWRPHQNRGIPWTHASMVELHHIGEYRKSEMIAAELGAKKVGFYEQDPEAYDQPPEDD----QGEIVEEVEAGT 312 (505) T ss_pred hhhhhcccCCccccCcchHHHHHHHHHHHhHHHHHHHHHHHHhhhheeeeecCCccCCCccccc----cCccccccCCce Confidence 9999987766788999999888887776655555555555556677778875433222211110 000000112344 Q ss_pred ccccccCccccccccccccchhhHHHHHHHHHHHHHHHHHHhCCChHHh-cccccccccccCHHHHHHHHHH-------- Q lcl|Aclame:pro 253 LFMYAPNGKKDGIQLLPVSEVAAKDEFWNIKNVTRDDQLAAHRVPPQLM-GIIPNNTGGFGDVEKAAMVFAR-------- 323 (368) Q Consensus 253 ~~~l~~~g~~~g~~~~pl~~~~~d~qf~e~~~~~~~~Ia~~fgVPp~~l-g~~~~~~~~~sn~e~~~~~f~~-------- 323 (368) +..|. .|-+++.+..+.--..|.+..+.....||+..|||-+.| |...+ .+||++.+....|.+ T Consensus 313 i~~L~-----pGe~i~~~~~~~p~~~~~~f~~~~lr~iaaglgi~ye~lt~D~s~--~nYSS~R~~~~e~~r~~~~~q~~ 385 (505) T protein:vir:96 313 YQLLP-----YGIRFKEHKIDHPHTNFGAFVKSSLRGVAAGMGPAYNRLAHDLEG--VNFSSLRSGELDERDLYKLLQFF 385 (505) T ss_pred eeecC-----CCCeeeeeCCCCCCCCHHHHHHHHHHHHHhhcCCCHHHHhccccc--ccHHHHHHHHHHHHHHHHHHHHH Confidence 44442 344555555554457788999999999999999998876 54433 578887666655443 Q ss_pred ---HHHHHHHHHH-HH--HHhhcCc-c-------eEeechhhhhcCChhhhhh--hhhhcC Q lcl|Aclame:pro 324 ---NEVKPLQDRL-LA--INDWIGD-E-------VVRFAPYALGGHDQPAAAP--GGQRSA 368 (368) Q Consensus 324 ---~tl~P~~~~i-e~--l~~~l~~-~-------~~~F~~~~Llr~D~~~ra~--~~~~~~ 368 (368) ..+.|+...+ ++ ++-.+.. . .++|-.-...--|+.-.+. ..+-.+ T Consensus 386 ~~~~~~~pi~~~~l~~a~l~G~i~~p~~~~~~~~~~~w~~p~~~~iDP~Ke~~a~~~~i~~ 446 (505) T protein:vir:96 386 VVTELLERVAGNLISMSLLTQALPLNMVDIDRLSQYAFQPRGWDWVDPAKDSKAHSESIKN 446 (505) T ss_pred HHHHHHHHHHHHHHHHHHHcCCcCCCCccchhhceeeeccCCccccChHHHHHHHHHHHHc Confidence 3455555443 22 2222211 1 1233333333334432221 111122 No 128 >protein:vir:79538 Length: 502 # NCBI annotation: putative portal protein # Family: family:all:47 # MgeID: mge:1871 # MgeName: cdtI # Cross-refs: genbank:acc:YP_001272517;genbank:gi:148609386;genbank:GeneID:5204374 Probab=98.64 E-value=1e-08 Score=64.34 Aligned_cols=346 Identities=11% Similarity=0.015 Sum_probs=157.2 Q ss_pred CCcCCCCccccccccccccccCCCcchhhccccCceEEEECCCceeccChHHHHHHHHHH--hc-cchhcccccHHHHHH Q lcl|Aclame:pro 1 MSRNKTRRAARAASAHVRTANTDAPTEHHTDRAAQAEVFSFGDPVEVLDRRELLDYVECM--RM-GQWYEPPMPWDGLAR 77 (368) Q Consensus 1 m~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~--~~-~~~~~~p~~~~~l~~ 77 (368) +|= +...++..++...+ +..+...+. ... +.|..-....++....... +. .-+...|+....+.. T Consensus 11 ~sP-~~~~~R~~ar~~~~-----~y~aa~~~r---~~~---~~~~~~s~~~~~~~~~~~lr~RaRdl~rNn~~a~~av~~ 78 (502) T protein:vir:79 11 FSP-GWKAARLRSRAVIQ-----AYEAVKTTR---THK---ARRENRTADQLSQYGAVSLREQARYLDNNHDLVIGVFDK 78 (502) T ss_pred cCh-HHHHHHHhhHHHHh-----hccccCccc---ccC---CCCCCCChHHHHHHHHHHHHHHHHHHHhcChHHHHHHHH Confidence 221 10011101110000 000000000 000 1111101111111111000 00 112233444444444 Q ss_pred HHHhccc-ccchhhhccch---------------HHhhccCCC----CcCHHHHHH-HHHhHhhhCCeeEEEEecC---- Q lcl|Aclame:pro 78 SFRAAAH-HSSAVYVKRNI---------------LVSTFIPHP----LLSRATFER-LVLDWQVFGNAYLERRENV---- 132 (368) Q Consensus 78 ~~r~~~~-~~~~~~~~~~~---------------~l~~~~~n~----~~~~~~~~~-~~~~~ll~Gnay~~i~r~~---- 132 (368) +...... ++-.+..+... .-..+..|+ ..+++.++. ++..++..|.+|+.+++.. T Consensus 79 ~~~nvVG~ggi~~~~~~~~~~~~~~~~~~~~ie~~w~~Wa~~~D~~g~~~f~~~q~l~~r~~~~dGE~f~~~~~~~~~~~ 158 (502) T protein:vir:79 79 LEERVVGKNGIIVEPHPVLRNGAIARDLAAEIRTRWSEWSVSPEVTGQFTRPMLERLMLRTWLRDGEVFAQMVSGRINSL 158 (502) T ss_pred HHHhhccCCceeeeeccCCCChhHHHHHHHHHHHHHHHhhcCcCccccCCHHHHHHHHHHHHHhCCceEEEEeecccCcc Confidence 4333332 22211111100 000111232 334555555 4568899999999987543 Q ss_pred ---CcceEEEEEecccccccccCC--------------C--eeEEEeC------CceEEEEcCccEEEecCCCCcCCccc Q lcl|Aclame:pro 133 ---LGGTIRLDTPLAKYVRRGLDL--------------N--TYFFVQN------WQQPYTFAAGSVFHLQEPDINQEVYG 187 (368) Q Consensus 133 ---~G~~~~L~~l~p~~v~~~~~~--------------~--~~~~~~~------~~~~~~~~~~dviH~r~~~~~~~~~G 187 (368) .+.++.|..|+|+++....+. . .|+.... ..+...+++++|||+......+...| T Consensus 159 ~~g~~~~l~lq~iepd~l~~~~~~~~~i~~GVe~d~~Gr~~aY~i~~~hPgd~~~~~~~rvpA~~vlH~f~~~r~gQ~RG 238 (502) T protein:vir:79 159 TPSAGVHFWLEALEPDFIPMTSDESNRLNQGVFVDDWGRPEKYLVYKSRPVSGRQMETKEVDAERMLHLKFVRRLHQMRG 238 (502) T ss_pred CCCcccceEEEEecchhcCCCCCCCCeeEeeeEECCCCceEEEEEeecCCCCCcccceeEechhheEEeecccCCccccC Confidence 335789999999887532211 1 1333321 23456789999999998776678899 Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHHhccCCCceeEEeCCCCccHHHHHHHHHHH-HHhcccccccccc-ccccCcccccc Q lcl|Aclame:pro 188 LPEYLSALNATWLNESATLFRRRYYKNGSHAGFILYMTDAAQKQEDVDTLREAM-KSAKGPGNFRNLF-MYAPNGKKDGI 265 (368) Q Consensus 188 ~spi~~a~~~i~~~~~a~~~~~~~f~ng~~p~gil~~~~~~l~~e~~~~~k~~~-~~~~g~~n~~~~~-~l~~~g~~~g~ 265 (368) +|.+..+...+.....-.+....--+=.+...++|+.+++.... .+..-..- +....- ..|..+ .|. .|. T Consensus 239 is~lapvl~~l~~l~~~~dael~~a~i~A~~~~fi~~~~~~~~~--~~~~~~~~~~~~~~l-~pG~i~~~L~-----pGe 310 (502) T protein:vir:79 239 TSLLSGVLIRLSALKEYEDSELTAARIAAALGMYIRKGDGQSYE--PDGNGSKENERELTI-QPGIIYDDLK-----PGE 310 (502) T ss_pred CchHHHHHHHHHHHhHHHHHHHHHHHHhhhheeeeecCCCcccc--cccCCCCCccccccc-cCCccccccC-----CCc Confidence 99999888888776665555555555567777888754321100 00000000 000001 123322 232 344 Q ss_pred ccccccchhhHHHHHHHHHHHHHHHHHHhCCChHHhcccccccccccCHHHHHHHHHHH-----------HHHHHHHHH- Q lcl|Aclame:pro 266 QLLPVSEVAAKDEFWNIKNVTRDDQLAAHRVPPQLMGIIPNNTGGFGDVEKAAMVFARN-----------EVKPLQDRL- 333 (368) Q Consensus 266 ~~~pl~~~~~d~qf~e~~~~~~~~Ia~~fgVPp~~lg~~~~~~~~~sn~e~~~~~f~~~-----------tl~P~~~~i- 333 (368) +++.+..+..-..|.+..+.....||+.+|||-+.|..- -+.+||++.+....|.+. .+.|+...| T Consensus 311 ~i~~~~p~~p~~~~~~f~~~~lr~iaaglGi~ye~lt~D--~s~nySs~R~~~~e~~r~~~~~q~~~~~~~~~pi~~~~l 388 (502) T protein:vir:79 311 EIGMVKSDRPNPNLETFRNGQLRAVAAGSRLSFSSTARN--YNGTYSAQRQELVESTDGYLILQDWFIGAVTRPMYRAWL 388 (502) T ss_pred eeeeeCCCCCCCCHHHHHHHHHHHHHhhcCCCHHHHhcc--ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Confidence 555555444456788889999999999999998887322 234888887666655443 344444433 Q ss_pred HH--HHhhcC-cce--------EeechhhhhcCChhhhhh--hhhhcC Q lcl|Aclame:pro 334 LA--INDWIG-DEV--------VRFAPYALGGHDQPAAAP--GGQRSA 368 (368) Q Consensus 334 e~--l~~~l~-~~~--------~~F~~~~Llr~D~~~ra~--~~~~~~ 368 (368) ++ ++..+. +.+ ++|-.-...--|+.-.+. ..+-.+ T Consensus 389 ~~a~l~G~i~~p~~~~~~~~~~~~W~~p~~~~iDP~Ke~~a~~~~i~~ 436 (502) T protein:vir:79 389 KQAVASGVIRLPRDLDRSSLYTAVYSGPVMPWIDPVKEAEAWKIQIRG 436 (502) T ss_pred HHHHHcCCCCCCCCCCchhhcceeeecCCccccChHHHHHHHHHHHHc Confidence 21 222221 111 122222222234432221 111122 No 129 >protein:vir:3420 Length: 533 # NCBI annotation: capsid component # Family: family:all:47 # MgeID: mge:70 # MgeName: lambda # Cross-refs: genbank:acc:NP_040583;genbank:gi:9626247;genbank:GeneID:2703526 Probab=98.62 E-value=1.2e-08 Score=64.06 Aligned_cols=355 Identities=9% Similarity=-0.060 Sum_probs=157.6 Q ss_pred CCcCCCCccccccccccccc--cCCCcchhhccccCceEEEECCCceeccChHHHHHHHHHH--hc-cchhcccccHHHH Q lcl|Aclame:pro 1 MSRNKTRRAARAASAHVRTA--NTDAPTEHHTDRAAQAEVFSFGDPVEVLDRRELLDYVECM--RM-GQWYEPPMPWDGL 75 (368) Q Consensus 1 m~~~k~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~--~~-~~~~~~p~~~~~l 75 (368) |.-. ...+........+ ...+....+......+..|. |.......++....... +. .-+...|+....+ T Consensus 1 ~~~p---~~~~~~~~~~~~~~~~~~~y~~~a~~~~~~~~~w~---p~~~s~~~~~~~~~~~lr~RaRdl~rNn~~a~~av 74 (533) T protein:vir:34 1 MKTP---TIPTLLGPDGMTSLREYAGYHGGGSGFGGQLRSWN---PPSESVDAALLPNFTRGNARADDLVRNNGYAANAI 74 (533) T ss_pred CCCc---hhhhhhcccccchHHHHHhhhhccCCCCCcccccc---cCCCCHHHHHHHHHHHHHHHHHHHHhcChHHHHHH Confidence 3211 0000000000000 00000000000011111111 11111111111111110 00 1122334444444 Q ss_pred HHHHHhcccccchhhhccch---------------HH--hh----ccCC------CCcCHHHHHH-HHHhHhhhCCeeEE Q lcl|Aclame:pro 76 ARSFRAAAHHSSAVYVKRNI---------------LV--ST----FIPH------PLLSRATFER-LVLDWQVFGNAYLE 127 (368) Q Consensus 76 ~~~~r~~~~~~~~~~~~~~~---------------~l--~~----~~~n------~~~~~~~~~~-~~~~~ll~Gnay~~ 127 (368) ..+.......|-....+.+. .+ ++ ..++ ...+++.++. ++..++..|.+|+. T Consensus 75 ~~~~~nvVG~Gi~~~~~p~~~~lg~~~~~~~~~~~~ie~~w~~w~~~~~~~~D~~g~~~f~~~q~l~~r~~~~dGE~f~~ 154 (533) T protein:vir:34 75 QLHQDHIVGSFFRLSHRPSWRYLGIGEEEARAFSREVEAAWKEFAEDDCCCIDVERKRTFTMMIREGVAMHAFNGELFVQ 154 (533) T ss_pred HHHHHHhhCCCceeeeccchhhcCCChhHHHHHHHHHHHHHHHhhcCccceeccccccCHHHHHHHHHHHHHhCCceEEE Confidence 44444333223222221110 00 11 1122 2234444444 45788999999999 Q ss_pred EEecCC-c--ceEEEEEecccccccccC---CC---------------eeEEEeC--Cc----------eEEEEcCccEE Q lcl|Aclame:pro 128 RRENVL-G--GTIRLDTPLAKYVRRGLD---LN---------------TYFFVQN--WQ----------QPYTFAAGSVF 174 (368) Q Consensus 128 i~r~~~-G--~~~~L~~l~p~~v~~~~~---~~---------------~~~~~~~--~~----------~~~~~~~~dvi 174 (368) +.+... | .+++|..|+|+++....+ +. .|+.... .+ .....++++|| T Consensus 155 ~~~~~~~g~~~~~~lq~ie~d~l~~~~~~~~~~~i~~GIe~d~~Gr~~aY~i~~~~~~~~~~~~~~~~~~~~~v~a~~Vl 234 (533) T protein:vir:34 155 ATWDTSSSRLFRTQFRMVSPKRISNPNNTGDSRNCRAGVQINDSGAALGYYVSEDGYPGWMPQKWTWIPRELPGGRASFI 234 (533) T ss_pred eeeccCCCCccceEEEEechhhcCCCCCCCCCCceEeeeEECCCCCeEEEEEeecCCCCccccccceeeeeeccChhHee Confidence 876543 2 367889999887753221 11 1443321 11 12234567899 Q ss_pred EecCCCCcCCccccchhhHHHHHHHHHHHHHHHHHHHHhccCCCceeEEeCCCCc----------cHHHHHHHHHHHHH- Q lcl|Aclame:pro 175 HLQEPDINQEVYGLPEYLSALNATWLNESATLFRRRYYKNGSHAGFILYMTDAAQ----------KQEDVDTLREAMKS- 243 (368) Q Consensus 175 H~r~~~~~~~~~G~spi~~a~~~i~~~~~a~~~~~~~f~ng~~p~gil~~~~~~l----------~~e~~~~~k~~~~~- 243 (368) |+..+...+...|+|.+..+...+.....-.+....--+=.+.-.++|+.+.+.. .++..+.+...... T Consensus 235 H~f~~~r~gQ~RGis~lapvl~~l~~l~~y~dael~~a~i~A~~a~fi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (533) T protein:vir:34 235 HVFEPVEDGQTRGANVFYSVMEQMKMLDTLQNTQLQSAIVKAMYAATIESELDTQSAMDFILGANSQEQRERLTGWIGEI 314 (533) T ss_pred eeccccCCCcccCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhheeeeecCCCcccccccccCCCcccccccccccchhh Confidence 9998876678899999998888777765555555544555666777776432210 11111112111111 Q ss_pred --hccc----cccccccccccCccccccccccccchhhHHHHHHHHHHHHHHHHHHhCCChHHh-cccccccccccCHHH Q lcl|Aclame:pro 244 --AKGP----GNFRNLFMYAPNGKKDGIQLLPVSEVAAKDEFWNIKNVTRDDQLAAHRVPPQLM-GIIPNNTGGFGDVEK 316 (368) Q Consensus 244 --~~g~----~n~~~~~~l~~~g~~~g~~~~pl~~~~~d~qf~e~~~~~~~~Ia~~fgVPp~~l-g~~~~~~~~~sn~e~ 316 (368) ..++ -+.|.+..|. .|.+++.++.+.....|.+..+.....||+.+|||-++| |..+ ..|||++.+ T Consensus 315 ~~~~~~~~~~l~pG~i~~L~-----pGe~i~~~~~~~p~~~~~~f~~~~lr~iAaglGi~ye~lt~D~s--~~nYSS~R~ 387 (533) T protein:vir:34 315 AAYYAAAPVRLGGAKVPHLM-----PGDSLNLQTAQDTDNGYSVFEQSLLRYIAAGLGVSYEQLSRNYA--QMSYSTARA 387 (533) T ss_pred hhccCcceeeccCceeeecC-----CCCeeeecCCCCCCCCHHHHHHHHHHHHHhhcCCCHHHHhhhcc--cccHHHHHH Confidence 1111 1234443342 344455555444456788889999999999999998887 5443 368888755 Q ss_pred HHHHHHH-----------HHHHHHHHHHH-H--HHhhcC-cc--------------eEeechhhhhcCChhhhhh--hhh Q lcl|Aclame:pro 317 AAMVFAR-----------NEVKPLQDRLL-A--INDWIG-DE--------------VVRFAPYALGGHDQPAAAP--GGQ 365 (368) Q Consensus 317 ~~~~f~~-----------~tl~P~~~~ie-~--l~~~l~-~~--------------~~~F~~~~Llr~D~~~ra~--~~~ 365 (368) ....|.+ ..+.|+...|. + ++..+. +. .++|-.-...--|+.-.+. ..+ T Consensus 388 ~~~e~~r~~~~~q~~~~~~~~~pi~~~wl~~ail~G~i~~p~~~~~~~~~~~~~~~~~~w~~p~~~~iDP~Ke~~a~~~~ 467 (533) T protein:vir:34 388 SANESWAYFMGRRKFVASRQASQMFLCWLEEAIVRRVVTLPSKARFSFQEARSAWGNCDWIGSGRMAIDGLKEVQEAVML 467 (533) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcccCCCccCCCchhhHHhhhceeeccCCccccChHHHHHHHHHH Confidence 5544433 33455555432 2 232221 11 0223333333335433322 222 Q ss_pred hcC Q lcl|Aclame:pro 366 RSA 368 (368) Q Consensus 366 ~~~ 368 (368) -++ T Consensus 468 i~~ 470 (533) T protein:vir:34 468 IEA 470 (533) T ss_pred HHc Confidence 222 No 130 >protein:vir:10321 Length: 495 # NCBI annotation: ORF23 # Family: family:all:47 # MgeID: mge:182 # MgeName: VHML # Cross-refs: genbank:acc:NP_758916;genbank:gi:27311190;genbank:GeneID:956137 Probab=98.40 E-value=2.4e-07 Score=56.88 Aligned_cols=348 Identities=11% Similarity=0.032 Sum_probs=148.3 Q ss_pred CCcCCCCccccccccccccccCCCcchhhccccCceEEEECCCceeccChHHHHHHH----HHHhccchhcccccHHHHH Q lcl|Aclame:pro 1 MSRNKTRRAARAASAHVRTANTDAPTEHHTDRAAQAEVFSFGDPVEVLDRRELLDYV----ECMRMGQWYEPPMPWDGLA 76 (368) Q Consensus 1 m~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~----~~~~~~~~~~~p~~~~~l~ 76 (368) |......-.+.......+... .+..+. ........+..-.| ...+.... .-.+ .-+...|+....+. T Consensus 1 m~~~~~~~~a~~~~~~~~~~~-~~y~aa--~~~~~~~~~~~~s~-----d~~~~~~~~~lr~RaR-dl~rNn~~a~~av~ 71 (495) T protein:vir:10 1 MNMTPSGYQSLASGLLVPVGA-SAYEGA--SGGHRWQDIGDYGP-----DTAVASGIQTLRARSH-HNVRNNPWATNAVA 71 (495) T ss_pred CCcccccccccchhhhhHHHh-hhhhcc--ccCcccCCCCCCCh-----hHHHHHHHHHHHHHHH-HHHhcChHHHHHHH Confidence 766554222211111111110 000000 00000010100011 11111111 1111 11223344444444 Q ss_pred HHHHhcccccchhhhccchH-----H----hhccCCC----CcCHHHHHH-HHHhHhhhCCeeEEEEec--CC--cceEE Q lcl|Aclame:pro 77 RSFRAAAHHSSAVYVKRNIL-----V----STFIPHP----LLSRATFER-LVLDWQVFGNAYLERREN--VL--GGTIR 138 (368) Q Consensus 77 ~~~r~~~~~~~~~~~~~~~~-----l----~~~~~n~----~~~~~~~~~-~~~~~ll~Gnay~~i~r~--~~--G~~~~ 138 (368) .+.......|-....+++.. + ..+..++ .++++.+.. ++..++..|.+|+.+... .. ..++. T Consensus 72 ~~~~~vVG~Gi~p~~~~~~~~~~~~ie~~w~~wa~~~D~~g~~~f~~lq~l~~r~~~~dGE~f~~~~~~~~~~g~~~~~~ 151 (495) T protein:vir:10 72 TWVAAAVGNGLTPRWRMKEQELRQELQELWGDWVNEADFDEVQSFYGLQALVVRTVINSGEAFVIKKPRPLSEGLSVPLQ 151 (495) T ss_pred HHHHhhcCCCcccccCCchHHHHHHHHHHHHHhhcCcccccccCHHHHHHHHHHHHHhCCceEEEEeecccCCCCccceE Confidence 44444333332222221110 0 0112222 234444454 557889999999987643 22 34688 Q ss_pred EEEeccccccccc------CCC---------------eeEEEeC----------CceEEEEcCccEEEecCCCCcCCccc Q lcl|Aclame:pro 139 LDTPLAKYVRRGL------DLN---------------TYFFVQN----------WQQPYTFAAGSVFHLQEPDINQEVYG 187 (368) Q Consensus 139 L~~l~p~~v~~~~------~~~---------------~~~~~~~----------~~~~~~~~~~dviH~r~~~~~~~~~G 187 (368) |..|+|+++.... +++ .|+.... ......+++++|||+.... .+...| T Consensus 152 lqliepd~l~~~~~~~~~~~g~~i~~GIe~d~~Gr~vaY~i~~~hpgd~~~~~~~~~~~rvpA~~vlH~f~~r-~gQ~RG 230 (495) T protein:vir:10 152 LQIIEPDMLASDIPDETLPSGGYVKGGIRFSNGGKRKAYCFYRNHPAESSLIGDPVDTVWIKAEHVLHVTVLT-VRSDAG 230 (495) T ss_pred EEEechhhcCCCCCCCCCCCCCEEEeceEECCCCceEEEEEeecCCCcccccccccceeeechhheEeccccC-CCcccC Confidence 9999998885211 110 1333221 1134668899999996543 467789 Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHHhccCCCceeEEeCCCCccHHHHHHHHHHHHHhcc----ccccccccccccCcccc Q lcl|Aclame:pro 188 LPEYLSALNATWLNESATLFRRRYYKNGSHAGFILYMTDAAQKQEDVDTLREAMKSAKG----PGNFRNLFMYAPNGKKD 263 (368) Q Consensus 188 ~spi~~a~~~i~~~~~a~~~~~~~f~ng~~p~gil~~~~~~l~~e~~~~~k~~~~~~~g----~~n~~~~~~l~~~g~~~ 263 (368) +|.+. ....+.-....++....--+=.+...++|+.+.+ ++..-..+-..-.+..+ .-+.|.+..|. . T Consensus 231 is~la-~i~~l~~l~~y~dael~~a~i~A~~~~fi~~~~~--~~~~~~~~~~~~~~~~~~~~~~l~pG~i~~L~-----p 302 (495) T protein:vir:10 231 APWFQ-LLLRLNELDQYEDAELVRKKTAALFAAFIQEATA--DSTGGPTIGQPKRSKGGKRITGLNPGTLQYLQ-----P 302 (495) T ss_pred cchhH-HHHHHHHhhHHHHHHHHHHHHhhhheeeeecCCC--ccccccccCccccccCcccceecCCceeeecC-----C Confidence 98554 3333333222223222223335566667764332 11111000000000000 01234444442 3 Q ss_pred ccccccccchhhHHHHHHHHHHHHHHHHHHhCCChHHh-cccccccccccCHHHHHHHHHHHH------------HHHHH Q lcl|Aclame:pro 264 GIQLLPVSEVAAKDEFWNIKNVTRDDQLAAHRVPPQLM-GIIPNNTGGFGDVEKAAMVFARNE------------VKPLQ 330 (368) Q Consensus 264 g~~~~pl~~~~~d~qf~e~~~~~~~~Ia~~fgVPp~~l-g~~~~~~~~~sn~e~~~~~f~~~t------------l~P~~ 330 (368) |-+++.++.+..-..|.+..+.....||+.+|||-+.| |...+ .|||++.+....|.+.. +.|+. T Consensus 303 Ge~i~~~~p~~p~~~~~~f~~~~lr~iaaglGi~Ye~ltgD~s~--~nYSS~R~~~~e~~r~~~~~q~~~~~~~~~~pi~ 380 (495) T protein:vir:10 303 GQEVKFSNPADVGTTYEPWLRYQLLSIAKGYGITYEMLTGDLRG--VNYSSIRAGLLEFRRLCQQVQHHMIIHQFCRPVG 380 (495) T ss_pred CCeeeeeCCCCCCCCHHHHHHHHHHHHHhhcCCCHHHHhccccc--ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Confidence 34455555443446788888999999999999999887 55433 67888766655553332 23333 Q ss_pred HHH-HH--HHhhcC-cce---------EeechhhhhcCChhhhh--hhhhhcC Q lcl|Aclame:pro 331 DRL-LA--INDWIG-DEV---------VRFAPYALGGHDQPAAA--PGGQRSA 368 (368) Q Consensus 331 ~~i-e~--l~~~l~-~~~---------~~F~~~~Llr~D~~~ra--~~~~~~~ 368 (368) ..| ++ ++-.+. +.+ ++|-.-...-.|+.-.+ +..+-++ T Consensus 381 ~~~l~~a~l~G~i~~p~~~~~~~~~~~~~w~~p~~~~vDP~Ke~~A~~~~i~~ 433 (495) T protein:vir:10 381 RWFMDFAVASGAVVIPDYLQRRRYYNRVSWRTPRWEEVDPLKKHLADLGDVRA 433 (495) T ss_pred HHHHHHHHHcCCCCCCCchhhhHhhhccccccCCccccChHHHHHHHHHHHHc Confidence 332 21 222221 111 22333333333443322 2222222 No 131 >protein:vir:95542 Length: 548 # NCBI annotation: Putative portal protein # Family: family:all:47 # MgeID: mge:1574 # MgeName: F10 # Cross-refs: genbank:acc:YP_001293348;genbank:gi:148912769;genbank:GeneID:5228194 Probab=98.40 E-value=1.9e-09 Score=68.44 Aligned_cols=338 Identities=11% Similarity=-0.007 Sum_probs=154.2 Q ss_pred CCcCC------------CCccccccccccccccCCCcchhhccccCceEEEECCCceeccChHHHHH--------HHHHH Q lcl|Aclame:pro 1 MSRNK------------TRRAARAASAHVRTANTDAPTEHHTDRAAQAEVFSFGDPVEVLDRRELLD--------YVECM 60 (368) Q Consensus 1 m~~~k------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~--------~~~~~ 60 (368) |..-. ++..+|... .+..+... +... .+-|.+......+.. +-.++ T Consensus 1 Mn~iDr~i~~~sP~~a~~R~~ar~~~--------~~y~aa~~---~r~~---~~~~~~~s~~~~i~~~~~~lr~RaRdL~ 66 (548) T protein:vir:95 1 MNLIDRLLEPLAPELVARRLAAREAI--------QAYEAARP---GRTH---KAKRQPLGADTSLQKSAVSMREQCRKLD 66 (548) T ss_pred CchHHhHhhhcchHHHHHHHHhHHHh--------ccccccCc---cccc---cccCCCCChHHHHHHHHHHHHHHHHHHH Confidence 22111 000000000 00111100 0000 011111111111111 11123 Q ss_pred hccchhcccccHHHHHHHHHhccc-ccchhhhcc-----------chH--Hh--hccCCC----CcCHHHHHH-HHHhHh Q lcl|Aclame:pro 61 RMGQWYEPPMPWDGLARSFRAAAH-HSSAVYVKR-----------NIL--VS--TFIPHP----LLSRATFER-LVLDWQ 119 (368) Q Consensus 61 ~~~~~~~~p~~~~~l~~~~r~~~~-~~~~~~~~~-----------~~~--l~--~~~~n~----~~~~~~~~~-~~~~~l 119 (368) +++ |+....+..+...... .+..+..+. +.. .+ .+..++ ..+++.+.. ++..++ T Consensus 67 rNn-----~~a~~av~~~~~nvVG~~G~~i~p~~l~~d~~~a~~l~~~ie~~w~~Wa~~~D~~g~~~f~~lq~l~~R~~~ 141 (548) T protein:vir:95 67 EDH-----DLVTGLLDRLEERVVGGSGIGVEPLPLRLDGSVHAELAMEIRSAWAEWSLSPETSGELTRPQVERLMCRTWL 141 (548) T ss_pred hcC-----hHHHHHHHHHHHhccCccccceeeeecCCCHHHHHHHHHHHHHHHHHhhcCccccccCCHHHHHHHHHHHHH Confidence 333 4433444444333322 122111110 000 00 111222 234554554 557889 Q ss_pred hhCCeeEEEEecCC-------cceEEEEEecccccccccCCC-----------------eeEEEeC----------CceE Q lcl|Aclame:pro 120 VFGNAYLERRENVL-------GGTIRLDTPLAKYVRRGLDLN-----------------TYFFVQN----------WQQP 165 (368) Q Consensus 120 l~Gnay~~i~r~~~-------G~~~~L~~l~p~~v~~~~~~~-----------------~~~~~~~----------~~~~ 165 (368) ..|.+|+.+.+... ..+..|..|+|+++....+.. .|+.... .... T Consensus 142 ~dGE~f~~~~~~~~~~~~~g~~~~~~lqliepd~l~~~~~~~~~~i~~GIE~D~~Grp~aY~i~~~hPgd~~~~~~~~~~ 221 (548) T protein:vir:95 142 RDGEGLAQKLMGRVPNYTFATSVPFALELLEPDYLPFSYNNLSKGIVQGIERDTWRRKRAYHLLKDHPGNLQTLGGSLAV 221 (548) T ss_pred hCCceEEEeeecccccccCCcccceEEEEechhhcCCCCCCCCCceeeeeEECCCCceEEEEEeecCCCcccccccccce Confidence 99999999876432 246789999998874322111 1333321 1135 Q ss_pred EEEcCccEEEecCCCCcCCccccchhhHHHHHHHHHHHHHHHHHHHHhccCCCceeEEeCCCCccHHHHHHHHHHHHHhc Q lcl|Aclame:pro 166 YTFAAGSVFHLQEPDINQEVYGLPEYLSALNATWLNESATLFRRRYYKNGSHAGFILYMTDAAQKQEDVDTLREAMKSAK 245 (368) Q Consensus 166 ~~~~~~dviH~r~~~~~~~~~G~spi~~a~~~i~~~~~a~~~~~~~f~ng~~p~gil~~~~~~l~~e~~~~~k~~~~~~~ 245 (368) ..+++++|||+..+...+...|+|.+..+...+.....-++....--+=.+...++|+.+++.. ...+.-...-.... T Consensus 222 ~rvpA~~VlHif~~~r~gQ~RGvs~lapvl~~l~~l~~y~dael~~aki~A~~a~fi~~~~~~~--~~~~~~~~~~~~~~ 299 (548) T protein:vir:95 222 KRVEAERIIHIAYRKRIGQNRGVPMLHAVLIRLADLKDYEESERVAARISAALAMYIKKGNPDS--YTVEPGKDRKNRTI 299 (548) T ss_pred eeechhHheecccccCCccccCcchHHHHHHHHHHHhHHHHHHHHHHHHhhhheeeeecCCCcc--ccCCCCcccccccc Confidence 6789999999998776678899999998888877766555555555555667777877543211 11000000000000 Q ss_pred ccccccccc-ccccCccccccccccccchhhHHHHHHHHHHHHHHHHHHhCCChHHh-cccccccccccCHHHHHHHHHH Q lcl|Aclame:pro 246 GPGNFRNLF-MYAPNGKKDGIQLLPVSEVAAKDEFWNIKNVTRDDQLAAHRVPPQLM-GIIPNNTGGFGDVEKAAMVFAR 323 (368) Q Consensus 246 g~~n~~~~~-~l~~~g~~~g~~~~pl~~~~~d~qf~e~~~~~~~~Ia~~fgVPp~~l-g~~~~~~~~~sn~e~~~~~f~~ 323 (368) .- ..|..+ .| . .|-+++.++.+.-...|.+..+.....||+.+|||-+.| |.. +.|||++.+....|.+ T Consensus 300 ~~-~pG~iv~~L-~----pGe~i~~~~p~~p~~~~~~f~~~~lr~IAaglGipYe~ltgD~---s~nYSS~R~~l~e~~r 370 (548) T protein:vir:95 300 PI-APGMVFDDL-E----PGEDVGMIESNRPNPFLEGFRNGQLRMIGAGTRSTYSSVSRAY---DGTYSAQRQELVEGWL 370 (548) T ss_pred cc-cCCcccccc-C----CCceeeecCCCCCCCCHHHHHHHHHHHHHhhcCCCHHHHhccc---chhHHHHHHHHHHHHH Confidence 00 123222 23 2 233455555443456788999999999999999998876 432 2489888776665544 Q ss_pred H-----------HHHHHHHHH-HH--HHhhcC-cce--------EeechhhhhcCChhhhh--hhhhhcC Q lcl|Aclame:pro 324 N-----------EVKPLQDRL-LA--INDWIG-DEV--------VRFAPYALGGHDQPAAA--PGGQRSA 368 (368) Q Consensus 324 ~-----------tl~P~~~~i-e~--l~~~l~-~~~--------~~F~~~~Llr~D~~~ra--~~~~~~~ 368 (368) . .+.|+...| ++ ++..+. +.+ ++|-.-...--|+.-.+ ...+-.+ T Consensus 371 ~~~~~q~~~i~~~~~Pi~~~wle~a~l~G~i~lP~~~~~~~~~~~~W~~P~~~~iDP~Kea~A~~~~i~~ 440 (548) T protein:vir:95 371 GYDLLQHEFIDYWCRPVYRSWLQMYLLARKERLPADVDHRTLYAAVYQGPVMPWINPMHEANAWELLVKA 440 (548) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcCCCCCCCchhheeeeeecCCccccChHHHHHHHHHHHHc Confidence 4 344444333 21 222221 111 12222222222332221 1111111 No 132 >protein:vir:78161 Length: 355 # NCBI annotation: hypothetical protein # Family: family:all:2372 # MgeID: mge:1847 # MgeName: Min1 # Cross-refs: genbank:acc:YP_001294798;genbank:gi:149882819;genbank:GeneID:5309189 Probab=98.13 E-value=2.7e-06 Score=51.12 Aligned_cols=232 Identities=10% Similarity=-0.017 Sum_probs=118.8 Q ss_pred eEEEEecCC-c--ceEEEEEecccccc---cccCCCe--eEEEe-CCceEEEEcCccEEEecCCCCcCCccccchhhHHH Q lcl|Aclame:pro 125 YLERRENVL-G--GTIRLDTPLAKYVR---RGLDLNT--YFFVQ-NWQQPYTFAAGSVFHLQEPDINQEVYGLPEYLSAL 195 (368) Q Consensus 125 y~~i~r~~~-G--~~~~L~~l~p~~v~---~~~~~~~--~~~~~-~~~~~~~~~~~dviH~r~~~~~~~~~G~spi~~a~ 195 (368) +.+|++... | .|..|.+.++.++. ...++.. +.+.. .+.....+++...|++++....+..||.+.+..+. T Consensus 1 v~Eivw~~~~g~~~~~~l~~r~~~~~~~f~~~~~~~l~~~~~~~~~g~~~~~lp~~kfi~~~~~~~~g~p~G~gLlr~~~ 80 (355) T protein:vir:78 1 MFEQVYRIENGRARLGKLAWRPPRTISRFDVAPDGGLVAIEQWGVFGKATVRIPVDRLVVFVNEREGANWLGQSLLRQAY 80 (355) T ss_pred CeEEEEEeeCCeEEEeeeeecCccceeeeeeccCCceeEEEecCCCCCCcceeccCCEEEEEeCCCCCCccchhhHHHHH Confidence 788887543 3 36778888887554 3333322 22222 23355678887777665544456789999999999 Q ss_pred HHHHHHHHHHHHHHHHHhcc--CCCceeEEeCCCCc----------cHHHHHHHHHHHHHhccccccccccccccCcccc Q lcl|Aclame:pro 196 NATWLNESATLFRRRYYKNG--SHAGFILYMTDAAQ----------KQEDVDTLREAMKSAKGPGNFRNLFMYAPNGKKD 263 (368) Q Consensus 196 ~~i~~~~~a~~~~~~~f~ng--~~p~gil~~~~~~l----------~~e~~~~~k~~~~~~~g~~n~~~~~~l~~~g~~~ 263 (368) -....-....++...|..-- ++|-++........ +.+.++.+....+....+.+++.+ + +. T Consensus 81 w~~~fK~~~~~~w~~f~Er~g~g~p~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~~~~~i~~g~~a~~i--i-----p~ 153 (355) T protein:vir:78 81 KNWLLKDRFLRIQALVGERNGLGVPIYQGAPLPEAIARDTARAEQWLNDQKEEGLQLAKEFRAGEAAGGY--I-----PH 153 (355) T ss_pred HHHHHHHhhHHHHHHHHHHcCCCceEEEecCCCCcccchhhhHHHHHHHHHHHHHHHHHHhhCCcceeEe--e-----cC Confidence 99999999999999999865 44444443211111 122333344433443333343322 2 23 Q ss_pred ccccccccchhhHHHHHHHHHHHHHHHHHHhCCChHHhcccccccccccCHHHHHHHHHHHHHHHHHHHHHH-HHhhc-- Q lcl|Aclame:pro 264 GIQLLPVSEVAAKDEFWNIKNVTRDDQLAAHRVPPQLMGIIPNNTGGFGDVEKAAMVFARNEVKPLQDRLLA-INDWI-- 340 (368) Q Consensus 264 g~~~~pl~~~~~d~qf~e~~~~~~~~Ia~~fgVPp~~lg~~~~~~~~~sn~e~~~~~f~~~tl~P~~~~ie~-l~~~l-- 340 (368) |++++-+........|.+.-++-.++|+.+.--. .+-....+++++++-.+... .-..+.+.-.++.|++ +|+.| T Consensus 154 g~~ie~~ea~g~~~~~~~~i~~~d~~Isk~iLGq-tlTs~~~~~gGS~Alg~vh~-~v~~~~~~aD~~~i~~~ln~~li~ 231 (355) T protein:vir:78 154 GANFTLTGVQGKLPEMDGPIRYHDEQIARAVLAH-FLTLGGDKSTGSYALGDTFA-SFFTGSLNAVMKHIADVTQQHVVE 231 (355) T ss_pred CceEEEeecCCCcccHHHHHHHHHHHHHHHHhhh-hhccccCCccchhhHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHH Confidence 3444434333444557788888899999887332 11111111122333222222 2223333444444432 44332 Q ss_pred -------Cc--c--eEeechhhhhcCChhhhhhhhhhcC Q lcl|Aclame:pro 341 -------GD--E--VVRFAPYALGGHDQPAAAPGGQRSA 368 (368) Q Consensus 341 -------~~--~--~~~F~~~~Llr~D~~~ra~~~~~~~ 368 (368) ++ . .++|+. .. -|.++.|+.-.+-. T Consensus 232 ~l~~lN~~~~~~~P~~~~~~--~~-~~~~~~a~~~~~l~ 267 (355) T protein:vir:78 232 DLVDQNWGPEEPAPRLVPAQ--LG-KEQPVTAEAIRALV 267 (355) T ss_pred HHHHhcCCCCCCCCEEEecC--cC-hhHHHHHHHHHHHH Confidence 11 1 244432 22 23334444433332 No 133 >protein:vir:106716 Length: 698 # NCBI annotation: gp18 # Family: family:all:297 # MgeID: mge:1599 # MgeName: Bcep1 # Cross-refs: genbank:acc:NP_944326;genbank:gi:38638625;genbank:GeneID:2657345 Probab=98.12 E-value=7.3e-07 Score=54.22 Aligned_cols=346 Identities=13% Similarity=0.056 Sum_probs=143.8 Q ss_pred CCcCCCCccccccccccccccCCCcchhhccccCceEEEE----------------------CCCceeccChHHHHHHHH Q lcl|Aclame:pro 1 MSRNKTRRAARAASAHVRTANTDAPTEHHTDRAAQAEVFS----------------------FGDPVEVLDRRELLDYVE 58 (368) Q Consensus 1 m~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------~g~p~~~~~~~~~~~~~~ 58 (368) ||+|.-|+...-+-...++ ..+ .+.++..+.....-+ ..+|.|-+.....+. +. T Consensus 1 ~~~~~~~~~~~~~~~~~~~--~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 76 (698) T protein:vir:10 1 MSRRNAKKRTQLAHTGRRP--EVA-KAAALAAAATIATATAAQPVPADMGRRGALNALDAAPVAEPSPSLRLARQFE-VD 76 (698) T ss_pred CCccchhhhhhhhhcCCCc--chh-hhhhhhhhhhhhhhccccccchhhcccccccccccccccCCCccccccccce-ec Confidence 9976543322111110110 000 000111111111111 112222211111111 00 Q ss_pred H-----------Hhccchhcc---cccHH---------HHHHHHHhcccccchhh----hccchHH-------------h Q lcl|Aclame:pro 59 C-----------MRMGQWYEP---PMPWD---------GLARSFRAAAHHSSAVY----VKRNILV-------------S 98 (368) Q Consensus 59 ~-----------~~~~~~~~~---p~~~~---------~l~~~~r~~~~~~~~~~----~~~~~~l-------------~ 98 (368) + .+.-++... -+++. .|+.+.+.-.....+.. .-+++.. + T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~F~Gy~~la~laQ~~eyr~~~~~ia~e~~R~w~~~~~~~~e~~~~~g~ 156 (698) T protein:vir:10 77 VSNYTPRERRAASYALDFNGTSMDALSFVTSSGFPGFPTLVLLAQLPEYRAMHEVLADECIRTWGEAIGGTKEKADTSGL 156 (698) T ss_pred cccCCccccchhhhhhcccccccccchhhhccCcchHHHHHHHhhccchhhHHHHHHHHhhcccceeccccchhhhhhcc Confidence 0 000000000 01111 11111111000000000 0000000 0 Q ss_pred hccCCC--CcCHH-------------H---HHHHHHhHhhhCCeeEEEEecCC-----------------cceEEEEEec Q lcl|Aclame:pro 99 TFIPHP--LLSRA-------------T---FERLVLDWQVFGNAYLERRENVL-----------------GGTIRLDTPL 143 (368) Q Consensus 99 ~~~~n~--~~~~~-------------~---~~~~~~~~ll~Gnay~~i~r~~~-----------------G~~~~L~~l~ 143 (368) ....|- ....+ . +...+..--++|-+.+++.-.++ |....|..++ T Consensus 157 ~~~~~~~~~~d~dqi~~L~~e~erl~V~~~l~eai~~aRlfGGa~~~i~I~gdd~~l~~PL~~~~~~I~kGslKGL~ViD 236 (698) T protein:vir:10 157 AAGGNAASTSDGDQLKQINDEIERLRIRDAVRTTVIHDQAFGRAHPYFKIKGDDQIMDTPLVPRPYTVPKGSFQGLRVVE 236 (698) T ss_pred cccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHhcccccceEEEEEeecCccccccccccccccccCccceeeeeec Confidence 000010 00001 1 11222233367777766643332 3455588888 Q ss_pred ccccccccCC-------C----eeEEEeCCceEEEEcCccEEEecCCCCc------CCccccchhhHHHHHHHHHHHHHH Q lcl|Aclame:pro 144 AKYVRRGLDL-------N----TYFFVQNWQQPYTFAAGSVFHLQEPDIN------QEVYGLPEYLSALNATWLNESATL 206 (368) Q Consensus 144 p~~v~~~~~~-------~----~~~~~~~~~~~~~~~~~dviH~r~~~~~------~~~~G~spi~~a~~~i~~~~~a~~ 206 (368) |..|++.... + .||++. |+ .+...-++.|...... ..+.|+|-.+.+.+.+.....+.. T Consensus 237 p~~vtP~~~n~~dP~spdfgkP~~y~V~--G~--~IH~SRL~~~vg~pvpd~LKp~y~f~G~Sv~q~~~e~V~~~~rT~~ 312 (698) T protein:vir:10 237 PYWVTPNNYNSINPVADDFYKPSTWWMI--GS--EVHATRLHTIVSRPVGDMLKPTYSFAGISMTQLAMPYIDNWLRTRQ 312 (698) T ss_pred ccccccchhhhccchhhccCCCceEEEe--cc--eecceeEEEecCCCchhhhcchhccCCccHHHHHHHHHHHHHHHhh Confidence 8887764321 1 134443 22 3445555545433222 235699999999999888777776 Q ss_pred HHHHHHhccCCCceeEEeC-CCCccHHHHHHHHHHH---HHhccccccccccccccCccccccccccccchhhHHHHHHH Q lcl|Aclame:pro 207 FRRRYYKNGSHAGFILYMT-DAAQKQEDVDTLREAM---KSAKGPGNFRNLFMYAPNGKKDGIQLLPVSEVAAKDEFWNI 282 (368) Q Consensus 207 ~~~~~f~ng~~p~gil~~~-~~~l~~e~~~~~k~~~---~~~~g~~n~~~~~~l~~~g~~~g~~~~pl~~~~~d~qf~e~ 282 (368) ....+.+. .+.+++. +. ...++.+....+...+ +..+ +|-|- ++++. ++=+|...+.+.. .+-+. T Consensus 313 ~v~~Li~~-~~~~~l~-~dla~aL~~g~~~~l~~R~eli~~~R--sn~G~-~llDk----~~Eefeq~st~lS--GLddV 381 (698) T protein:vir:10 313 SVSDIVKQ-FSVSGIL-MDLAQALTPGANVDLSMRAELINRYR--DNRNI-LFLDK----ATEEFFQFNTPLS--GLDAL 381 (698) T ss_pred hHHHHHHH-hhHHHHH-HHHHHhcCChhhHHHHHHHHHHHHhc--Cccce-EEEec----CCcceEEEecCcC--CHHHH Confidence 66666654 2223221 10 0112222222233222 3333 34443 33431 1223444442222 23334 Q ss_pred HHHHHHHHHHHhCCChHHh-cccccccccccCHHHHHHHHHHH-------HHHHHHHHHHHH-Hh----hcCcceEeech Q lcl|Aclame:pro 283 KNVTRDDQLAAHRVPPQLM-GIIPNNTGGFGDVEKAAMVFARN-------EVKPLQDRLLAI-ND----WIGDEVVRFAP 349 (368) Q Consensus 283 ~~~~~~~Ia~~fgVPp~~l-g~~~~~~~~~sn~e~~~~~f~~~-------tl~P~~~~ie~l-~~----~l~~~~~~F~~ 349 (368) .....+.||.+-+||...| |..+.+ -.++-|.-.+.||.. .|.|.++++-++ -+ ...+ -+.|.+ T Consensus 382 i~qf~q~VAgaa~IPltkLfGqSPkG--lNATGE~D~rnYYD~I~s~Qe~~L~p~L~rl~~ii~rS~~G~idp-~i~~~f 458 (698) T protein:vir:10 382 QAQAQEQMSAVSHIPLIKLLGITPTG--LNASSEGEIRVWYDYVRAYQRNALQQLMNDVIVMIQLSLFGAVDP-SIKWQW 458 (698) T ss_pred HHHHHHHHHhhhcCchhhhhccCCcc--cCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCC-cceEEe Confidence 4445678999999998775 655431 224555566666654 577777765432 22 1223 366777 Q ss_pred hhhhcCChhhhhhhhhhcC Q lcl|Aclame:pro 350 YALGGHDQPAAAPGGQRSA 368 (368) Q Consensus 350 ~~Llr~D~~~ra~~~~~~~ 368 (368) ..|..+|.+.+|+...+-| T Consensus 459 nPL~qmtd~EkAeI~~k~A 477 (698) T protein:vir:10 459 NALRELDDLEVAEARYKQA 477 (698) T ss_pred CCCCCcCHHHHHHHHhhhh Confidence 7899999999999777666 No 134 >protein:vir:78589 Length: 695 # NCBI annotation: NUDIX hydrolase # Family: family:all:297 # MgeID: mge:1854 # MgeName: BcepNY3 # Cross-refs: genbank:acc:YP_001294854;genbank:gi:149882917;genbank:GeneID:5291060 Probab=97.99 E-value=2.4e-06 Score=51.36 Aligned_cols=348 Identities=13% Similarity=0.051 Sum_probs=143.4 Q ss_pred CCcCCCCccccccccccccccCCCcchhhccccCceEEEECC----------------------CceeccChHHHHH--- Q lcl|Aclame:pro 1 MSRNKTRRAARAASAHVRTANTDAPTEHHTDRAAQAEVFSFG----------------------DPVEVLDRRELLD--- 55 (368) Q Consensus 1 m~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g----------------------~p~~~~~~~~~~~--- 55 (368) ||+|.-|+...-+-...++ ..+ .+.++..+.....-+.. +|.|-+.....+. T Consensus 1 ~~~~~~~~~~~~~~~~~~~--~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (695) T protein:vir:78 1 MSRRNAKKRTQLAHTGRRP--EVA-KAAALAAAATIATATAAQPVPADMGRRGALNALDAAPVAEPSPSLRLARQFEVDV 77 (695) T ss_pred CCccchhhhhhhhhcCCCc--chh-hhhhhhhhhhhhhhccccccchhhcccccccccccccccCCCcccccceeceecc Confidence 9976543322111111110 000 00011111111111111 2222111111110 Q ss_pred ----------HHHHHhccchhcccccHH---------HHHHHHHhcccccchhh----hccchHH-------------hh Q lcl|Aclame:pro 56 ----------YVECMRMGQWYEPPMPWD---------GLARSFRAAAHHSSAVY----VKRNILV-------------ST 99 (368) Q Consensus 56 ----------~~~~~~~~~~~~~p~~~~---------~l~~~~r~~~~~~~~~~----~~~~~~l-------------~~ 99 (368) +......+....--+++. .++.+.+.......+.. .-+++.. +. T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~F~Gy~~la~laQ~~eyr~~~~~ia~e~~R~w~~~~~~~~e~~~~~g~~ 157 (695) T protein:vir:78 78 SNYTPRERRAASYALDFNGTSMDALSFVTSSGFPGFPTLVLLAQLPEYRAMHEVLADECIRTWGEAIGGTKEKADTSGLA 157 (695) T ss_pred ccCCccccchhhhhhcccccccccchhhhccCcchHHHHHHHhhccchhhHHHHHHHHhhcccceeccccchhhhhhccc Confidence 000000000000001111 11111111000000000 0000000 00 Q ss_pred ccCCC--CcC-------------H---HHHHHHHHhHhhhCCeeEEEEecCC-----------------cceEEEEEecc Q lcl|Aclame:pro 100 FIPHP--LLS-------------R---ATFERLVLDWQVFGNAYLERRENVL-----------------GGTIRLDTPLA 144 (368) Q Consensus 100 ~~~n~--~~~-------------~---~~~~~~~~~~ll~Gnay~~i~r~~~-----------------G~~~~L~~l~p 144 (368) ...|- ... . .-+...+..--++|-+.+++.-.++ |....|..++| T Consensus 158 ~~~~~~~~~d~dqi~~L~~e~erL~V~~~l~eaik~aRlfGGa~~~i~i~gdd~~l~~PL~~~~~~I~kGslKGl~ViDp 237 (695) T protein:vir:78 158 AGGNAASTSDGDQLKQINDEIERLRIRDAVRTTVIHDQAFGRAHPYFKIKGDDQIMDTPLVPRPYTVPKGSFQGLRVVEP 237 (695) T ss_pred ccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHhhccccceEEEEEeccCccccccccccccccccCcceeeeEeecc Confidence 00010 000 0 1111222233467887766654332 34555888888 Q ss_pred cccccccCC-------C----eeEEEeCCceEEEEcCccEEEecCCCCc------CCccccchhhHHHHHHHHHHHHHHH Q lcl|Aclame:pro 145 KYVRRGLDL-------N----TYFFVQNWQQPYTFAAGSVFHLQEPDIN------QEVYGLPEYLSALNATWLNESATLF 207 (368) Q Consensus 145 ~~v~~~~~~-------~----~~~~~~~~~~~~~~~~~dviH~r~~~~~------~~~~G~spi~~a~~~i~~~~~a~~~ 207 (368) ..+++.... + .||++. |+ .+...-++.|...... ..+.|+|-.+.+.+.+.....+... T Consensus 238 ~~vtP~~~n~~dP~spdfgkP~~y~V~--G~--kIH~SRL~~f~g~plPd~LKp~y~~~GiSv~q~~~e~V~~~~rT~~~ 313 (695) T protein:vir:78 238 YWVTPNNYNSINPVADDFYKPSTWWMI--GT--EVHATRLHTIVSRPVGDMLKPTYSFAGISMTQLAMPYIDNWLRTRQS 313 (695) T ss_pred cccccchhhhccchhhccCCCceEEEe--ce--EEeeeeEEEecCCCchhhhhcccccCcccHHHHHHHHHHHHHHHHhH Confidence 887764321 1 134443 22 3445555555433222 2457999999999888887777666 Q ss_pred HHHHHhccCCCceeEEeC-CCCccHHHHHHHHH---HHHHhccccccccccccccCccccccccccccchhhHHHHHHHH Q lcl|Aclame:pro 208 RRRYYKNGSHAGFILYMT-DAAQKQEDVDTLRE---AMKSAKGPGNFRNLFMYAPNGKKDGIQLLPVSEVAAKDEFWNIK 283 (368) Q Consensus 208 ~~~~f~ng~~p~gil~~~-~~~l~~e~~~~~k~---~~~~~~g~~n~~~~~~l~~~g~~~g~~~~pl~~~~~d~qf~e~~ 283 (368) ...+.+. .+..++ ++. ...+.......+.. .++..+ +|-|. ++++. ++-+|...+.+.. .+-+.. T Consensus 314 v~~Li~~-~~v~~l-k~dla~~L~~g~~~~l~~R~eli~~~R--sn~G~-~llDk----~~Eefeq~stslS--GLddVi 382 (695) T protein:vir:78 314 VSDIVKQ-FSVSGI-LMDLAQALMPGANVDLSMRAELINRYR--DNRNI-LFLDK----ATEEFFQFNTPLS--GLDALQ 382 (695) T ss_pred HHHHHHh-hhhHHH-HHHHHHhhcChhHHHHHHHHHHHHHhc--Cccce-EEEec----CCcceEEEecccC--CHHHHH Confidence 6666654 223332 111 01122222222222 223333 34443 34431 1223444442221 123333 Q ss_pred HHHHHHHHHHhCCChHHh-cccccccccccCHHHHHHHHHHH-------HHHHHHHHHHHH-Hhh-cCc--ceEeechhh Q lcl|Aclame:pro 284 NVTRDDQLAAHRVPPQLM-GIIPNNTGGFGDVEKAAMVFARN-------EVKPLQDRLLAI-NDW-IGD--EVVRFAPYA 351 (368) Q Consensus 284 ~~~~~~Ia~~fgVPp~~l-g~~~~~~~~~sn~e~~~~~f~~~-------tl~P~~~~ie~l-~~~-l~~--~~~~F~~~~ 351 (368) -...+.||.+-+||...| |..+. +-.++-|.-.+.||.. .|.|.++++-++ -+- +|. .-+.|.+.- T Consensus 383 ~qf~q~VAgaa~IPltkLfGqSPk--GlNATGE~D~rnYYD~I~s~Qe~~L~p~L~rl~~ii~rS~~G~idpdi~~~fnP 460 (695) T protein:vir:78 383 AQAQEQMSAVSHIPLIKLLGITPT--GLNASSEGEIRVWYDYVRAYQRNALQQLMNDVIVMIQLSLFGAVDPSIKWQWNA 460 (695) T ss_pred HHHHHHHHhhhcCchhhhhccCCc--cccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcceEEeCC Confidence 444677999999998775 66553 1224555566666654 577777665432 211 221 136677778 Q ss_pred hhcCChhhhhhhhhhcC Q lcl|Aclame:pro 352 LGGHDQPAAAPGGQRSA 368 (368) Q Consensus 352 Llr~D~~~ra~~~~~~~ 368 (368) |-.+|.+.+|+...+-| T Consensus 461 L~qmtd~EkAeI~~k~A 477 (695) T protein:vir:78 461 LRELDDLEVAESRYKQA 477 (695) T ss_pred CCCcCHHHHHHHHhhhh Confidence 99999999999777666 No 135 >protein:vir:98816 Length: 446 # NCBI annotation: hypothetical protein # Family: family:all:32558 # MgeID: mge:1530 # MgeName: Ma-LMM01 # Cross-refs: genbank:acc:YP_851097;genbank:gi:117530254;genbank:GeneID:4484480 Probab=97.97 E-value=5.3e-06 Score=49.51 Aligned_cols=342 Identities=10% Similarity=0.018 Sum_probs=150.3 Q ss_pred CCcCCCCccccccccccccccCCCcchhhcccc-CceEEEECCCceeccChH--HHHHHHHHH----hccchhcccccHH Q lcl|Aclame:pro 1 MSRNKTRRAARAASAHVRTANTDAPTEHHTDRA-AQAEVFSFGDPVEVLDRR--ELLDYVECM----RMGQWYEPPMPWD 73 (368) Q Consensus 1 m~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~p~~~~~~~--~~~~~~~~~----~~~~~~~~p~~~~ 73 (368) |- . +.+.+|...-........ +...+..+-+|-+++..+ ++..++.++ +....+..-+..+ T Consensus 1 ~~-------~-----~~~~~p~~~~~~~~~~~~~~~~~~~g~~~~D~~lr~~gg~~~~~~~l~~~m~e~D~~v~s~l~~R 68 (446) T protein:vir:98 1 MN-------M-----EVRNAPTPAIRRRTIYAMEHLGLATSYLSEDGGYKRAGKPTYQQLSAWDEAAQTEPIIAQGLDSI 68 (446) T ss_pred Cc-------c-----cccCCCchhhhhhhhhccccchhhcccCCcchHhhhcCCChHHHHHHHHHHHhcchHHHHHHHHH Confidence 11 0 111111111010110001 111111111344444321 112222221 1111111111100 Q ss_pred HHHHHHHhccc---ccchhhhccchHHhhccCCCCcCHHHHHHHHHhHhhhCCeeEEEEecCC---cceE-------EEE Q lcl|Aclame:pro 74 GLARSFRAAAH---HSSAVYVKRNILVSTFIPHPLLSRATFERLVLDWQVFGNAYLERRENVL---GGTI-------RLD 140 (368) Q Consensus 74 ~l~~~~r~~~~---~~~~~~~~~~~~l~~~~~n~~~~~~~~~~~~~~~ll~Gnay~~i~r~~~---G~~~-------~L~ 140 (368) +.......+ .+.... ... +.....+ ...++....+.+.+.+|-++.++++... ..|. .+. T Consensus 69 --k~av~~~~w~V~p~~~~~--a~~-v~~~l~~--~~~~~~~~~~ldai~~G~s~~Eivw~~~~g~~~p~~~~d~~~~~~ 141 (446) T protein:vir:98 69 --ALSVLNKVGPYQHGDKRI--KKF-IDDQLRN--RAKTWISHCVKSIMTYGFSLSEQIYAHGARDNMPATVLDDIVNYH 141 (446) T ss_pred --HHHhhcCCceecCccHHH--HHH-HHHHHhh--cCchhHHHHHHHHHhhCceeeeEEEeecccccccchhhccccccc Confidence 000000000 000000 000 0000111 1234455557788899999999987421 1222 223 Q ss_pred EecccccccccC--------------CCe-------------eEEEeCCceEEEEcCccEEEecCCCCcCCccccchhhH Q lcl|Aclame:pro 141 TPLAKYVRRGLD--------------LNT-------------YFFVQNWQQPYTFAAGSVFHLQEPDINQEVYGLPEYLS 193 (368) Q Consensus 141 ~l~p~~v~~~~~--------------~~~-------------~~~~~~~~~~~~~~~~dviH~r~~~~~~~~~G~spi~~ 193 (368) |+++..+ .... ..+ .......+....++.+.++|+++....+..||.|.+.. T Consensus 142 ~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~iP~~kfi~~~~~~~~~~p~G~gLlr~ 220 (446) T protein:vir:98 142 PLQVMLI-ANDNGRIVDGDTVTASQYKSGYWVPLPPYRIGDPPKKVDVVGSHVRLPSHKRLFINYNTKGNNPWGTSCLTS 220 (446) T ss_pred cccceee-eccCCccccccccchhhcccccccCcccchhhhhhhhcccCcccccccccceEEEEecCCCCCccccchHHH Confidence 3322211 0000 000 00111233456678888888887665677899999999 Q ss_pred HHHHHHHHHHHHHHHHHHHhccCCCceeEEeCCCCc-----cH---HHHHHHHHHH-HHhccc-ccccccc--ccccCcc Q lcl|Aclame:pro 194 ALNATWLNESATLFRRRYYKNGSHAGFILYMTDAAQ-----KQ---EDVDTLREAM-KSAKGP-GNFRNLF--MYAPNGK 261 (368) Q Consensus 194 a~~~i~~~~~a~~~~~~~f~ng~~p~gil~~~~~~l-----~~---e~~~~~k~~~-~~~~g~-~n~~~~~--~l~~~g~ 261 (368) +.-....-..+.++...|..--++|--+.+++.... ++ +..+.+.+.+ ++.... .+++.++ +..|.|. T Consensus 221 ~~w~~~fK~~~~~~w~~f~E~yG~P~~vGkyp~ga~~~~~~~~~~~~~~~~~~~~L~~av~~~~~da~~ii~~~~~P~g~ 300 (446) T protein:vir:98 221 VLDYSIFKRAFRDMMLIALDRYGTPLIYVIVPPGNTGVVEEAPDGTEITTTIAEQAEDALRRLSTDSGLVLTQLSKEQPV 300 (446) T ss_pred HHHHHHHHHhhHHHHHHHHhHcCCceeEEeecCCCCcccccchhHHHHHHHHHHHHHHHHHhccccceeeeecccCCCCc Confidence 999999999999999999999999988888764322 11 1112222333 333222 2222221 1113221 Q ss_pred ccccccccccchhhHHHHHHHHHHHHHHHHHHhCCChHHhcccccccccccCHHHHHHHHHHHHHHHHHHHHHH-HHhhc Q lcl|Aclame:pro 262 KDGIQLLPVSEVAAKDEFWNIKNVTRDDQLAAHRVPPQLMGIIPNNTGGFGDVEKAAMVFARNEVKPLQDRLLA-INDWI 340 (368) Q Consensus 262 ~~g~~~~pl~~~~~d~qf~e~~~~~~~~Ia~~fgVPp~~lg~~~~~~~~~sn~e~~~~~f~~~tl~P~~~~ie~-l~~~l 340 (368) .+++...+-+. -..|.+.-++-..+|+++....---+|...+.+++++-.+..+.. ..+.+.-..+.|++ +|+.| T Consensus 301 --eie~~ea~~~~-~~~~~~~i~~~d~~IskaiLg~~Ltl~~~~~~~GS~ala~vh~~V-~~d~~~aDa~~i~~tln~~L 376 (446) T protein:vir:98 301 --QVGALTTGNNF-SDSFERAISLCDNNMLMGMGIPNLLVQNRETTFGTGRASEIQLEL-FDGKINSIFDTVIHAFTEQV 376 (446) T ss_pred --eEEeeccccCC-hhhHHHHHHHHHHHHHHHHhcccccccccccccchhhhHHHHHHH-HHHHHHHHHHHHHHHHHHHH Confidence 23333333222 234888888999999999876655555443333344323333332 23334555555653 55544 Q ss_pred Ccce------------------EeechhhhhcCChhhhhhhhhhcC Q lcl|Aclame:pro 341 GDEV------------------VRFAPYALGGHDQPAAAPGGQRSA 368 (368) Q Consensus 341 ~~~~------------------~~F~~~~Llr~D~~~ra~~~~~~~ 368 (368) -..+ ++|++.+ ..|.++.|++-++-+ T Consensus 377 i~~l~~lNf~~~~~~~~~~~~~~~~~~~e--~eDl~~~a~~~~~L~ 420 (446) T protein:vir:98 377 IGNLIRLNFDPALYPLASNTGYITRLPGR--ATDLAALVEAIKQMH 420 (446) T ss_pred HHHHHHhCCCccccccccccccceeccCC--hhhHHHHHHHHHHHH Confidence 3322 2333222 235555555544433 No 136 >protein:vir:101541 Length: 694 # NCBI annotation: gp17 # Family: family:all:297 # MgeID: mge:1477 # MgeName: Bcep43 # Cross-refs: genbank:acc:NP_958122;genbank:gi:41057668;genbank:GeneID:2716798 Probab=97.79 E-value=1.8e-05 Score=46.55 Aligned_cols=348 Identities=14% Similarity=0.072 Sum_probs=146.5 Q ss_pred CCcCCCCcccccccccccc----c---cCCCcchhhccccCceEEEEC-----------CCceeccChHHHHHHHHHH-- Q lcl|Aclame:pro 1 MSRNKTRRAARAASAHVRT----A---NTDAPTEHHTDRAAQAEVFSF-----------GDPVEVLDRRELLDYVECM-- 60 (368) Q Consensus 1 m~~~k~~~~~~~~~~~~~~----~---~~~~~~~~~~~~~~~~~~~~~-----------g~p~~~~~~~~~~~~~~~~-- 60 (368) ||+|.-|+...-++...++ + +..+..+.+..++-....-+- -+|.|-+. +...+++- T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~ 77 (694) T protein:vir:10 1 MSRRNAKKRTQLARTGRRPEVAKAAALAAAATIATAAAQPVPADFARRGALNALDAAPVAEPSPSLR---LARQFEVDVS 77 (694) T ss_pred CCccchhhHHHHhhcCCCcchhhhhhhhhhhhhhhcCCCcccCCccccccchhhcccccCCCCcchh---hhhhcccccc Confidence 9977544332222211111 0 111111111111111111111 12332211 11112110 Q ss_pred -----------h---ccchhcccccH---------HHHHHHHHhcccccchhh----hccchHH-------------hhc Q lcl|Aclame:pro 61 -----------R---MGQWYEPPMPW---------DGLARSFRAAAHHSSAVY----VKRNILV-------------STF 100 (368) Q Consensus 61 -----------~---~~~~~~~p~~~---------~~l~~~~r~~~~~~~~~~----~~~~~~l-------------~~~ 100 (368) + .+....--+++ ..|+.+.+.......+.. .-+++.. +.. T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~F~Gy~~la~laQ~~eyr~~~~~ia~e~~R~w~~~~~~~~e~~~~~g~~~ 157 (694) T protein:vir:10 78 NYTPRERRAASYALDFNGTSMDALSFVTSSGFPGFPTLVLLAQLPEYRAMHEVLADECIRTWGEAIGGTKEKADTSGLAA 157 (694) T ss_pred CCCccccchhhhhhccCcccccchhhhhccCcchHHHHHHHhhccchhhHHHHHHHHhhcccceeccccchhhhhhcccc Confidence 0 00000000100 011222211100000000 0000000 000 Q ss_pred cCCC--CcC-------------H---HHHHHHHHhHhhhCCeeEEEEecCC-----------------cceEEEEEeccc Q lcl|Aclame:pro 101 IPHP--LLS-------------R---ATFERLVLDWQVFGNAYLERRENVL-----------------GGTIRLDTPLAK 145 (368) Q Consensus 101 ~~n~--~~~-------------~---~~~~~~~~~~ll~Gnay~~i~r~~~-----------------G~~~~L~~l~p~ 145 (368) ..|- ... . .-+...+..--++|-+.+++.-.++ |....|..++|. T Consensus 158 ~~~~~~~~d~dqi~~L~~e~erl~V~~~l~eaik~aRlfGGa~~~i~I~gdd~~l~~PL~~~~~~I~kGslKGl~ViDp~ 237 (694) T protein:vir:10 158 GGNAASTSDGDQLKQINDEIERLRIRDAVRTTVIHDQAFGRAHPYFKIKGDDQIMDTPLVPRPYTVPKGSFQGLRVVEPY 237 (694) T ss_pred cccccccccHHHHHHHHHHHHHHHHHHHHHHHHHhhccccceEEEEEeecCccccccccccccccccCcceeeeEeeccc Confidence 0010 000 0 1112223333467887766654332 445558888888 Q ss_pred ccccccCC-------C----eeEEEeCCceEEEEcCccEEEecCCCCc------CCccccchhhHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 146 YVRRGLDL-------N----TYFFVQNWQQPYTFAAGSVFHLQEPDIN------QEVYGLPEYLSALNATWLNESATLFR 208 (368) Q Consensus 146 ~v~~~~~~-------~----~~~~~~~~~~~~~~~~~dviH~r~~~~~------~~~~G~spi~~a~~~i~~~~~a~~~~ 208 (368) .+++.... + .||++. |+ .+...-++.|...... ..+.|+|-.+.+.+.+.....+.... T Consensus 238 ~vtP~~~n~~dP~spdfgkP~~y~V~--G~--~IH~SRL~~f~g~plPd~LKp~y~~~G~Sv~q~~~e~V~~~~rT~~~v 313 (694) T protein:vir:10 238 WVTPNNYNSINPVADDFYKPSTWWMI--GT--EVHATRLHTIVSRPVGDMLKPTYSFAGISMTQLAMPYIDNWLRTRQSV 313 (694) T ss_pred ccccchhhhccchhhccCCCceEEEe--ce--EEeeeeEEEecCCCchhhhhcccccCcccHHHHHHHHHHHHHHHHhHH Confidence 87764321 1 134443 22 3445555555433222 24579999999998888877776666 Q ss_pred HHHHhccCCCceeEEeC-CCCccHHHHHHHH---HHHHHhccccccccccccccCccccccccccccchhhHHHHHHHHH Q lcl|Aclame:pro 209 RRYYKNGSHAGFILYMT-DAAQKQEDVDTLR---EAMKSAKGPGNFRNLFMYAPNGKKDGIQLLPVSEVAAKDEFWNIKN 284 (368) Q Consensus 209 ~~~f~ng~~p~gil~~~-~~~l~~e~~~~~k---~~~~~~~g~~n~~~~~~l~~~g~~~g~~~~pl~~~~~d~qf~e~~~ 284 (368) ..+.+. .+..++. +. ...+.......+. +.++..+ +|-|. ++++. ++-+|...+.+.. .+-+..- T Consensus 314 ~~Li~~-~~v~~lk-~dla~~L~~g~~~~l~~R~eli~~~R--sn~G~-~llDk----~~Eefeq~stslS--GLddVi~ 382 (694) T protein:vir:10 314 SDIVKQ-FSVSGIL-MDLAQALMPGANVDLSMRAELINRYR--DNRNI-LFLDK----ATEEFFQFNTPLS--GLDALQA 382 (694) T ss_pred HHHHHh-hhhHHHH-HHHHHhhcChhHHHHHHHHHHHHHhc--Cccce-EEEec----CCcceEEEecccC--CHHHHHH Confidence 666654 2233321 11 0112222222222 2223333 34443 34431 1223444442221 1233334 Q ss_pred HHHHHHHHHhCCChHHh-cccccccccccCHHHHHHHHHHH-------HHHHHHHHHHHH-Hhh-cCc--ceEeechhhh Q lcl|Aclame:pro 285 VTRDDQLAAHRVPPQLM-GIIPNNTGGFGDVEKAAMVFARN-------EVKPLQDRLLAI-NDW-IGD--EVVRFAPYAL 352 (368) Q Consensus 285 ~~~~~Ia~~fgVPp~~l-g~~~~~~~~~sn~e~~~~~f~~~-------tl~P~~~~ie~l-~~~-l~~--~~~~F~~~~L 352 (368) ...+.||.+-+||...| |..+. +-.++-|.-.+.||.. .|.|.++++-++ -+- +|. .-+.|.+.-| T Consensus 383 qf~q~VAgaa~IPltkLfGqSPk--GlNATGE~D~rnYYD~I~s~Qe~~L~p~L~rl~~ii~rS~~G~idp~i~~~fnPL 460 (694) T protein:vir:10 383 QAQEQMSAVSHIPLIKLLGITPT--GLNASSEGEIRVWYDYVRAYQRNALQQLMNDVIVMIQLSLFGAVDPSIKWQWNAL 460 (694) T ss_pred HHHHHHHhhhcCchhhhhccCcc--cccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCC Confidence 44677999999998775 66553 1224555566666654 577777665432 211 221 1366777789 Q ss_pred hcCChhhhhhhhhhcC Q lcl|Aclame:pro 353 GGHDQPAAAPGGQRSA 368 (368) Q Consensus 353 lr~D~~~ra~~~~~~~ 368 (368) -.+|.+.+|+...+-| T Consensus 461 ~qmtd~EkAeI~~k~A 476 (694) T protein:vir:10 461 RELDDLEVAESRYKQA 476 (694) T ss_pred CCcCHHHHHHHHhhhh Confidence 9999999999776666 No 137 >protein:vir:3648 Length: 695 # NCBI annotation: gp17 # Family: family:all:297 # MgeID: mge:75 # MgeName: Bcep781 # Cross-refs: genbank:acc:NP_705643;genbank:gi:23752328;genbank:GeneID:955749 Probab=97.72 E-value=8.7e-06 Score=48.33 Aligned_cols=351 Identities=13% Similarity=0.054 Sum_probs=144.3 Q ss_pred CCcCCCCccccccccccccccC-CCcchhhc-------cccCce-----------EEEECCCceeccChHHHHH------ Q lcl|Aclame:pro 1 MSRNKTRRAARAASAHVRTANT-DAPTEHHT-------DRAAQA-----------EVFSFGDPVEVLDRRELLD------ 55 (368) Q Consensus 1 m~~~k~~~~~~~~~~~~~~~~~-~~~~~~~~-------~~~~~~-----------~~~~~g~p~~~~~~~~~~~------ 55 (368) ||+|.-|+.+.-++...++.-. .+..+.+. .++-+. .+-..-+|.|-+.....+. T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (695) T protein:vir:36 1 MSRRNAKKRAQLARTGRRPEVAKAATLAAAATIATAAAAQPVPADFARRGALNALDAAPVVEPSPSLRLARQFEVDVSNY 80 (695) T ss_pred CCccchhhHHHHhhcCCCcchhhhhhhhhhhhhhhhccccccchhhhhcccccccccccccCCCcccccceeceeccccc Confidence 9987655544333322221100 00000000 000000 0000111222111111110 Q ss_pred -------HHHHHhccchhcccccHH---------HHHHHHHhcccccchhh----hccchHH-------------hhccC Q lcl|Aclame:pro 56 -------YVECMRMGQWYEPPMPWD---------GLARSFRAAAHHSSAVY----VKRNILV-------------STFIP 102 (368) Q Consensus 56 -------~~~~~~~~~~~~~p~~~~---------~l~~~~r~~~~~~~~~~----~~~~~~l-------------~~~~~ 102 (368) +......+....--+++. .++.+.+.-.....+.. .-+++.. +.... T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~F~Gy~~la~laQ~~eyr~~~~~ia~e~~R~w~~~~~~~~e~~~~~g~~~~~ 160 (695) T protein:vir:36 81 TPRERRAASYALDFNGTSMDALSFVTSSGFPGFPTLVLLAQLPEYRAMHEVLADECIRTWGEAIGGTKEKADTSGLAAGG 160 (695) T ss_pred CccccchhhhhhcccccccccchhhhccCcchHHHHHHHhhccchhhHHHHHHHHhhcccceecccchhhhhhccccccc Confidence 000000000000001111 11111111000000000 0000000 00000 Q ss_pred CC--CcC-------------H---HHHHHHHHhHhhhCCeeEEEEecCC-----------------cceEEEEEeccccc Q lcl|Aclame:pro 103 HP--LLS-------------R---ATFERLVLDWQVFGNAYLERRENVL-----------------GGTIRLDTPLAKYV 147 (368) Q Consensus 103 n~--~~~-------------~---~~~~~~~~~~ll~Gnay~~i~r~~~-----------------G~~~~L~~l~p~~v 147 (368) |. ... . .-+...+..--++|-+.+++.-.++ |....|..++|..+ T Consensus 161 ~~~~~~d~dqik~L~~e~erL~V~~~l~eaik~aRlfGGa~~~i~i~gdd~~l~~PL~~~~~~I~kGslKGl~ViDp~~v 240 (695) T protein:vir:36 161 NAASTSDGDQLKQINDEIERLRIRDAVRTTVIHDQAFGRAHPYFKIKGDDQIMDTPLVPRPYTVPKGSFQGLRVVEPYWV 240 (695) T ss_pred cccccCchHHHHHHHHHHHHHHHHHHHHHHHHhhccccceEEEEEeccCccccccccccccccccCcceeeeEeeccccc Confidence 00 000 0 1111222233367887766654332 34555888888887 Q ss_pred ccccCC-------C----eeEEEeCCceEEEEcCccEEEecCCCCc------CCccccchhhHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 148 RRGLDL-------N----TYFFVQNWQQPYTFAAGSVFHLQEPDIN------QEVYGLPEYLSALNATWLNESATLFRRR 210 (368) Q Consensus 148 ~~~~~~-------~----~~~~~~~~~~~~~~~~~dviH~r~~~~~------~~~~G~spi~~a~~~i~~~~~a~~~~~~ 210 (368) ++.... + .||++. |+ .+...-++.|...... ..+.|+|-.+.+.+.+.....+...... T Consensus 241 tP~~~n~~dP~spdfgkP~~y~V~--G~--kIH~SRL~~f~g~plPd~LKp~y~~~GiSv~q~~~e~V~~~~rT~~~v~~ 316 (695) T protein:vir:36 241 TPNNYNSINPVADDFYKPSTWWMI--GT--EVHATRLHTIVSRPVGDMLKPTYSFAGISMTQLAMPYIDNWLRTRQSVSD 316 (695) T ss_pred ccchhhhccchhhccCCCceEEEe--ce--EEeeeeEEEecCCCchhhhhcccccCcccHHHHHHHHHHHHHHHHhHHHH Confidence 764321 1 134443 22 3445555555433222 2457999999999888887766666666 Q ss_pred HHhccCCCceeEEeC-CCCccHHHHHHHH---HHHHHhccccccccccccccCccccccccccccchhhHHHHHHHHHHH Q lcl|Aclame:pro 211 YYKNGSHAGFILYMT-DAAQKQEDVDTLR---EAMKSAKGPGNFRNLFMYAPNGKKDGIQLLPVSEVAAKDEFWNIKNVT 286 (368) Q Consensus 211 ~f~ng~~p~gil~~~-~~~l~~e~~~~~k---~~~~~~~g~~n~~~~~~l~~~g~~~g~~~~pl~~~~~d~qf~e~~~~~ 286 (368) +.+. .+..++ ++. ...+..+....+. +.++..+ +|-|. ++++. ++-+|...+.+.. .+-+..-.. T Consensus 317 Li~~-~~v~~l-k~dla~aL~~g~~~~l~~R~eli~~~R--sn~G~-~llDk----~~Eefeq~stslS--GLddVi~qf 385 (695) T protein:vir:36 317 IVKQ-FSVSGI-LMDLAQALMPGANVDLSMRAELINRYR--DNRNI-LFLDK----ATEEFFQFNTPLS--GLDALQAQA 385 (695) T ss_pred HHHh-hhHHHH-HHHHHHhhcChhHHHHHHHHHHHHHhc--Cccce-EEEec----CCcceEEEecccC--CHHHHHHHH Confidence 6544 222322 111 0111111111222 2223333 34443 34431 1223444442221 123333445 Q ss_pred HHHHHHHhCCChHHh-cccccccccccCHHHHHHHHHHH-------HHHHHHHHHHHH-Hhh-cCc--ceEeechhhhhc Q lcl|Aclame:pro 287 RDDQLAAHRVPPQLM-GIIPNNTGGFGDVEKAAMVFARN-------EVKPLQDRLLAI-NDW-IGD--EVVRFAPYALGG 354 (368) Q Consensus 287 ~~~Ia~~fgVPp~~l-g~~~~~~~~~sn~e~~~~~f~~~-------tl~P~~~~ie~l-~~~-l~~--~~~~F~~~~Llr 354 (368) .+.||.+-+||...| |..+.+ -.++-|.-.+.||.. .|.|.++++-++ -+- +|. .-+.|.+.-|-. T Consensus 386 ~q~VAgaa~IPltkLfGqSPkG--lNATGE~D~rnYYD~I~s~Qe~~L~p~L~rl~~ii~rS~~G~idpdi~~~fnPL~q 463 (695) T protein:vir:36 386 QEQMSAVSHIPLIKLLGITPTG--LNASSEGEIRVWYDYVRAYQRNALQQLMNDVIVMIQLSLFGAVDPSIKWQWNALRE 463 (695) T ss_pred HHHHHhhhcCchhhhhccCccc--ccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCC Confidence 677999999998775 665531 224555566666654 577777665432 211 221 136677778999 Q ss_pred CChhhhhhhhhhcC Q lcl|Aclame:pro 355 HDQPAAAPGGQRSA 368 (368) Q Consensus 355 ~D~~~ra~~~~~~~ 368 (368) +|.+.+|+...+-| T Consensus 464 mtd~EkAeI~~k~A 477 (695) T protein:vir:36 464 LDDLEVAESRYKQA 477 (695) T ss_pred cCHHHHHHHHhhhh Confidence 99999999777666 No 138 >protein:vir:102426 Length: 631 # NCBI annotation: gp11 # Family: family:all:2798 # MgeID: mge:1618 # MgeName: Pipefish # Cross-refs: genbank:acc:YP_655288;genbank:gi:109521851;genbank:GeneID:4157741 Probab=97.63 E-value=1.1e-06 Score=53.31 Aligned_cols=359 Identities=14% Similarity=0.089 Sum_probs=177.2 Q ss_pred CCcCCC-CccccccccccccccCCCcchhhccccCceEEEE--CCCceeccChHHHHHHHHHHhc-------cchhcccc Q lcl|Aclame:pro 1 MSRNKT-RRAARAASAHVRTANTDAPTEHHTDRAAQAEVFS--FGDPVEVLDRRELLDYVECMRM-------GQWYEPPM 70 (368) Q Consensus 1 m~~~k~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~g~p~~~~~~~~~~~~~~~~~~-------~~~~~~p~ 70 (368) |+..-+ +..+|.+..+.. +..+-.++...-+-...+++ +|.+- ...++.+..+|... -+|...-+ T Consensus 1 ~~a~~~lr~~rrpkg~~~a--~~r~L~aAs~~~~dpg~~~~~~~g~~~---~~~WQ~eAW~~~d~v~Elry~vgW~~~s~ 75 (631) T protein:vir:10 1 MAATQSLRLVRRPKGGRPA--PSRALTAASQPLPDPSQVFSKSTGISR---NSDWQTDAWEAVDLVGELRYYVGWRASSC 75 (631) T ss_pred CCcccceeeeecCCCCCcc--chhhhhhhhccccchhhhhhhhcCCcc---cchhhHHHHHHHHhhhhHHHHhhhhhhhh Confidence 543321 111211111100 00000000000001111111 22110 11112222212110 01111111 Q ss_pred cHHHHHHHHHhcccc----cchhhhccc-----hHHhhccCCCCcCHHHHHHHHHhHhhhCCeeEEEE-ecCCcc----- Q lcl|Aclame:pro 71 PWDGLARSFRAAAHH----SSAVYVKRN-----ILVSTFIPHPLLSRATFERLVLDWQVFGNAYLERR-ENVLGG----- 135 (368) Q Consensus 71 ~~~~l~~~~r~~~~~----~~~~~~~~~-----~~l~~~~~n~~~~~~~~~~~~~~~ll~Gnay~~i~-r~~~G~----- 135 (368) ++..| ...+.+.+. +.....+.. .+.......+....+.++.++.++-+-|.+|+.+. |+++|- T Consensus 76 sr~rL-~as~idpDtg~ptg~iee~~~~~~~v~~~~~~i~gG~lgQ~~llkrl~~~ltV~GE~wiv~l~~p~~~~~~~pd 154 (631) T protein:vir:10 76 SRCRL-VASELDENTGLPTGGISEDNTEGERVREIVSKIADGTLGQAALTKRVVECLTVPGELWIVILTRPVKGAPAQPD 154 (631) T ss_pred ceeee-EeeeeccCCCCCccccccCCchhHHHHHHHHhcCCCcchHHHHHHHHHhheecccceEEEEEeccCcCCCCCcc Confidence 11000 011222221 122221111 11222334445566889999999999999999875 333221 Q ss_pred -----eEEEEEecccccccccCCCeeEEEeCCceEEEEcCc-cE-EEecCCCCcCCccccchhhHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 136 -----TIRLDTPLAKYVRRGLDLNTYFFVQNWQQPYTFAAG-SV-FHLQEPDINQEVYGLPEYLSALNATWLNESATLFR 208 (368) Q Consensus 136 -----~~~L~~l~p~~v~~~~~~~~~~~~~~~~~~~~~~~~-dv-iH~r~~~~~~~~~G~spi~~a~~~i~~~~~a~~~~ 208 (368) .-+.+++....|.....+++--+....|....|..+ || +.+=.++|....+--||+.++...+.-.....+.. T Consensus 155 ~~~r~~~~W~~vt~~ei~~~~~g~g~~v~lp~g~~h~~~~~~D~l~RiW~P~prr~~e~dSpvra~l~~l~Ei~~~t~~i 234 (631) T protein:vir:10 155 GSVRTRQEWYAVSKEEIKKSNKGSGTNIVLPTGEEHEFVKGTDIIFRVWIPKPRKASEPDSPVRAVLDSIREIVRTTKTI 234 (631) T ss_pred cccccccceeeccHHHHhcccCcccceeecCCCCccceecCCceEEEeeCCCcccccCCcchhHHHHHHHHHHHHhhhHH Confidence 345677777788776666654444444555555442 33 33335677777889999999999998888888877 Q ss_pred HHHHhccCCCceeEEeCCCC-c-------------------cHHHHHHHHHHH-HHh------ccccccccccccccCcc Q lcl|Aclame:pro 209 RRYYKNGSHAGFILYMTDAA-Q-------------------KQEDVDTLREAM-KSA------KGPGNFRNLFMYAPNGK 261 (368) Q Consensus 209 ~~~f~ng~~p~gil~~~~~~-l-------------------~~e~~~~~k~~~-~~~------~g~~n~~~~~~l~~~g~ 261 (368) .+--+.-.+-.|||.+|... + .+-..++|.+.+ +.. .+..-+-.++++...++ T Consensus 235 ~aaakSRl~gnGvlflP~els~P~~~~~~~~~~g~~v~~~~g~pa~~~l~~~l~q~a~tai~De~S~aA~vPii~~~p~E 314 (631) T protein:vir:10 235 ANASKSRLIGNGVLFVPHEMSLPAAQGPVSEVEGEEIAPLVGEPAVQQLTDMLFQVAETAVEDEDSQAAFIPVIAGVPGE 314 (631) T ss_pred HHHHHHHHhhCceeEeccccccCCCCCCCCCcCCccCCccccchhHHHHHHHHHHHHhhhhcCCCCccceeeeeEeechH Confidence 77777777777888776421 1 112445555444 211 12333444555544442 Q ss_pred -ccccccccccchhhHHHHHHHHHHHHHHHHHHhCCChHHh-cccccccccccCHHHHHHHHHHHHHHHHHHHHHH-HHh Q lcl|Aclame:pro 262 -KDGIQLLPVSEVAAKDEFWNIKNVTRDDQLAAHRVPPQLM-GIIPNNTGGFGDVEKAAMVFARNEVKPLQDRLLA-IND 338 (368) Q Consensus 262 -~~g~~~~pl~~~~~d~qf~e~~~~~~~~Ia~~fgVPp~~l-g~~~~~~~~~sn~e~~~~~f~~~tl~P~~~~ie~-l~~ 338 (368) -++++...+. +.-+.--+.+|+-.+..||...-|||..| |+..+.+-|.+ =|....-++-.|.|.+..|.+ |.+ T Consensus 315 ~i~~i~hlkf~-~ei~e~aiktR~daI~RlA~glDi~pE~LLGlGsd~NHWsA--WqI~dedVrlHI~P~l~lic~AlT~ 391 (631) T protein:vir:10 315 QIKDVKHIRFD-NEITEVAIKTRNDAIARLAMGLDVSPERLLGLGSQTNHWSA--WQISDEDVQLHIAPVMEIFCQALTD 391 (631) T ss_pred HhcCeeEEeec-CchhHHHHhhHHHHHHHHHhccCCchhhheeccCCccceEE--EEecccceeeecchHHHHHHHHHHh Confidence 1334443333 34455678999999999999999999874 76433333321 123333455667888877753 433 Q ss_pred h-c-------C---c-ceEeechhhhhcC-Chhhhh-hhhhhcC Q lcl|Aclame:pro 339 W-I-------G---D-EVVRFAPYALGGH-DQPAAA-PGGQRSA 368 (368) Q Consensus 339 ~-l-------~---~-~~~~F~~~~Llr~-D~~~ra-~~~~~~~ 368 (368) . | | . +.+-||.+.|..- |....| +..+|.| T Consensus 392 q~Lrp~Le~eGvDp~kYvvW~DaS~Lt~dPdr~deA~qa~drGA 435 (631) T protein:vir:10 392 QILRVTLAREGIDPSKYVVWYDPSQLTIDPDKSDEAKFAYENGA 435 (631) T ss_pred hHHHHHHHHhCCCHHHhEeeecCcccccCCCCcHHHHHHHHcCC Confidence 2 2 1 1 2477998888543 333332 2455655 No 139 >protein:vir:105782 Length: 449 # NCBI annotation: gp5 # Family: family:all:6783 # MgeID: mge:1501 # MgeName: ES18 # Cross-refs: genbank:acc:YP_224143;genbank:gi:62362218;genbank:GeneID:3342535 Probab=97.49 E-value=3.8e-06 Score=50.28 Aligned_cols=344 Identities=11% Similarity=0.037 Sum_probs=141.7 Q ss_pred CCcCCCCccccccccccc-cccCCCcchhhccccCceEEE-ECCCceeccChHHHHHHHHHHhccchhcccccHHHHHHH Q lcl|Aclame:pro 1 MSRNKTRRAARAASAHVR-TANTDAPTEHHTDRAAQAEVF-SFGDPVEVLDRRELLDYVECMRMGQWYEPPMPWDGLARS 78 (368) Q Consensus 1 m~~~k~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~g~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~ 78 (368) ||++=+..+........- -++..-.+....-.+....+| .||-|.. ++...+. .+++.+.++..-|. ...+.+ T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~rd~l~~~~~glg~~r~~~~~~~g~~~~-~~~~~l~---~~Yr~~~ia~~iVd-~~~d~~ 75 (449) T protein:vir:10 1 MTDKLTLAVNHALNDARMARARMGLMVPTMGLDNKRHSAWCEYGFPEL-VTYENLY---SLYRRGGIAHGAVE-KLVGKC 75 (449) T ss_pred CchhhHHHHhhhcchhHHHHHHHHHHHHHhcCCcccchhhhhcCCccc-CCHHHHH---HHHhcCchhHHHHH-hhhhhh Confidence 987644322211111110 000000000000001111222 2555653 3433322 22332322222121 112233 Q ss_pred HHhcccc--cchhhhccchHHhhccCCCCcCHHHHHHHHH---hHhhhCCeeEEEE-ecCC---------cceEEEEEec Q lcl|Aclame:pro 79 FRAAAHH--SSAVYVKRNILVSTFIPHPLLSRATFERLVL---DWQVFGNAYLERR-ENVL---------GGTIRLDTPL 143 (368) Q Consensus 79 ~r~~~~~--~~~~~~~~~~~l~~~~~n~~~~~~~~~~~~~---~~ll~Gnay~~i~-r~~~---------G~~~~L~~l~ 143 (368) .+....- +.......................+|..+.. --.++|-+.+.+. +++. +.+..|.|+. T Consensus 76 ~~~~~~i~~g~~~~~~~~~~~~e~~~~~l~~~~~~~~l~ea~~~~rl~Gga~i~i~v~d~~~l~~Pl~~~~~i~~i~v~~ 155 (449) T protein:vir:10 76 WQTNPEIIEGDDADDSEDETSWEKKSKQVFTNRLWRSFAEADRRRLVGRYAGILLHIRDEKDWNLPATKGRGLQKVSVSW 155 (449) T ss_pred hhcCcccccCccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCcEEEEEEecCCCCCCcccccCcceeeEEeec Confidence 2221100 0000000000000000000001123333321 1235677777664 3322 3567777777 Q ss_pred cccccccc---C--CC-----eeEEEeC-----CceEEEEcCccEEEecCCCCcCCccccchhhHHHHHHHHH-HHHHHH Q lcl|Aclame:pro 144 AKYVRRGL---D--LN-----TYFFVQN-----WQQPYTFAAGSVFHLQEPDINQEVYGLPEYLSALNATWLN-ESATLF 207 (368) Q Consensus 144 p~~v~~~~---~--~~-----~~~~~~~-----~~~~~~~~~~dviH~r~~~~~~~~~G~spi~~a~~~i~~~-~~a~~~ 207 (368) ...+++.. + .. .+|++.. ....+.+.+.-|+||... +.-|.|-++.+.+.+... ..+..+ T Consensus 156 ~~~i~~~~~~~dp~sp~yg~P~~y~v~~~~~g~~~~~~~iH~SRl~~~~~~----~~~g~~~L~~~yn~l~~~~~~~~~~ 231 (449) T protein:vir:10 156 AGSLKVAEWDTGINSKTYGQPKLWKYTERLPNGSSRRVDIHPDRVFILGDY----SEDAIGFLEPAYNAFVSLEKVEGGS 231 (449) T ss_pred cccCChhhhhcCCCCCCCCCceEEEEeeeccCCCccceeeccceeEeecCC----CCCChhHHHHHHHHhhhHHHhhhhH Confidence 65554321 1 11 1444432 123456888889998543 334888888887755322 222233 Q ss_pred HHHHHhccCCCc-----------eeEEeCCCCccHHHHHHHHHHHHHhccccccccccccccCccccccccccccchhhH Q lcl|Aclame:pro 208 RRRYYKNGSHAG-----------FILYMTDAAQKQEDVDTLREAMKSAKGPGNFRNLFMYAPNGKKDGIQLLPVSEVAAK 276 (368) Q Consensus 208 ~~~~f~ng~~p~-----------gil~~~~~~l~~e~~~~~k~~~~~~~g~~n~~~~~~l~~~g~~~g~~~~pl~~~~~d 276 (368) ...+++|-.+-- ++....+ ...++..+++.+..+....+.+ .+++. .+-+|+.++.+..+ T Consensus 232 a~~~l~~~~rq~~~~~~~~~~~~~l~~~~~-~~~e~~~~~~~~~~~~~~~~~~---~~~i~-----~~~d~~~~~~~~sg 302 (449) T protein:vir:10 232 GESFLKNAARQLNVNFEKEIDFTNLASLYG-VSIDELQDKFNEVAGEINRGND---VLMTT-----QGATVTPLVTSVAD 302 (449) T ss_pred HHHHHHHHHHHHhhhhhhhhhhhhhhHHhh-CCchHHHHHHHHHHHHHhccch---heeec-----CCcceEEEecccCC Confidence 444444422111 1111111 1233333444444443322222 12222 22245555554443 Q ss_pred HHHHHHHHHHHHHHHHHhCCChHHh-cccccccccccCHHHHHHHHHHH------HHHHHHHHHHH-HHh-hcC--cceE Q lcl|Aclame:pro 277 DEFWNIKNVTRDDQLAAHRVPPQLM-GIIPNNTGGFGDVEKAAMVFARN------EVKPLQDRLLA-IND-WIG--DEVV 345 (368) Q Consensus 277 ~qf~e~~~~~~~~Ia~~fgVPp~~l-g~~~~~~~~~sn~e~~~~~f~~~------tl~P~~~~ie~-l~~-~l~--~~~~ 345 (368) +-+......++||.+-|||...| |...+ +.+..+ -.+.|+.. .|.|.++++-. |-+ .++ +.-+ T Consensus 303 --l~d~l~~~~q~iaaa~~IP~t~L~Gqsp~---glnst~-D~~nyyd~i~~~Q~~l~p~le~l~~~l~~s~~g~~~~d~ 376 (449) T protein:vir:10 303 --PTATYNVNLQTAAAGVDIPTRILIGNQQA---ERSSTE-DQKYFNARCQSRRVDLSFEIEDFCDKLIELKIIDAVAKK 376 (449) T ss_pred --hhHHHHHHHHHHHHHhCCCeeeeeccCcc---ccccch-hHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhcCCCCCce Confidence 33445556788999999998775 65443 222222 23344332 35555554432 211 122 2346 Q ss_pred eechhhhhcCChhhhhhhhhhcC Q lcl|Aclame:pro 346 RFAPYALGGHDQPAAAPGGQRSA 368 (368) Q Consensus 346 ~F~~~~Llr~D~~~ra~~~~~~~ 368 (368) .|.+..|...+.+.+|+...+-| T Consensus 377 ~i~f~pL~~~t~kEkAei~k~~A 399 (449) T protein:vir:10 377 AVIWDDLNEQTGTEKLTNAKTMG 399 (449) T ss_pred eEEeCCCCCCCHHHHHHHHHHHH Confidence 67777899999999999776655 No 140 >protein:vir:8654 Length: 629 # NCBI annotation: gp12 # Family: family:all:2798 # MgeID: mge:156 # MgeName: Rosebush # Cross-refs: genbank:acc:NP_817773;genbank:gi:29566205;genbank:GeneID:1259465 Probab=97.37 E-value=1.5e-05 Score=47.09 Aligned_cols=358 Identities=13% Similarity=0.048 Sum_probs=171.2 Q ss_pred CCcCCCCccccccccccccccCCCcchhhccccCceEEEECCCceeccCh-HHHHHHHHHHhc-------cchhcccccH Q lcl|Aclame:pro 1 MSRNKTRRAARAASAHVRTANTDAPTEHHTDRAAQAEVFSFGDPVEVLDR-RELLDYVECMRM-------GQWYEPPMPW 72 (368) Q Consensus 1 m~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~p~~~~~~-~~~~~~~~~~~~-------~~~~~~p~~~ 72 (368) |+-.-=+..+|.++.+.. ++..+-++....-.-....+...- -+... .++.+..+|... -+|...-+++ T Consensus 1 ma~~~lr~~rrpk~~p~~-~r~~al~aas~~i~~p~~~~~ks~--~~~~~~~WQ~eAW~~~d~v~Elry~vgW~~~s~Sr 77 (629) T protein:vir:86 1 MAPTSLRIVRRPKSEPVS-TRQRALVAASQPVENPGKAFRKAM--GSSTRTDWQEDAWKAYDAVGELRYYVGWRSSSASR 77 (629) T ss_pred CCccceeeeecCCCCChh-hhhhhhhhhhhccccccchhhhhc--CCCchhhhhHHHHHHHHhhhhHHHHhhhhhhhhce Confidence 765544444444332221 121111111111111122221100 01111 122222222210 0111111111 Q ss_pred HHHHHHHHhcccccc---hhhhccc------hHHhhccCCCCcCHHHHHHHHHhHhhhCCeeEEEEecC------CcceE Q lcl|Aclame:pro 73 DGLARSFRAAAHHSS---AVYVKRN------ILVSTFIPHPLLSRATFERLVLDWQVFGNAYLERRENV------LGGTI 137 (368) Q Consensus 73 ~~l~~~~r~~~~~~~---~~~~~~~------~~l~~~~~n~~~~~~~~~~~~~~~ll~Gnay~~i~r~~------~G~~~ 137 (368) .. ....+.+.+.+. .+....+ .+....-..+....+.++.+..++-+-|.+|+.+.--. .|.++ T Consensus 78 ~r-L~as~idpDtg~ptg~i~e~~~~~~~v~~~v~~i~gG~lgqa~lLkr~~~~ltV~GE~wiv~~~~~~~~~d~~~~~~ 156 (629) T protein:vir:86 78 VR-LIASAIDPDTGLPTGSIDEDDRVGARVQQIVNQIAGGALGQAQLIKRVVEQLTVAGETWVAILFTDKSRLDSNGNPV 156 (629) T ss_pred ee-eEeeeecCCCCCCccccCCCchhHHHHHHHHHhhcCChhhHHHHHHHHHhheecccceEEEEeecCCCccCCCCcch Confidence 00 001122222211 1111111 11222233445556889999999999999999987322 23333 Q ss_pred E-EEEecccccccccCCCeeEEEeCCceEEEE-cCccEEEec--CCCCcCCccccchhhHHHHHHHHHHHHHHHHHHHHh Q lcl|Aclame:pro 138 R-LDTPLAKYVRRGLDLNTYFFVQNWQQPYTF-AAGSVFHLQ--EPDINQEVYGLPEYLSALNATWLNESATLFRRRYYK 213 (368) Q Consensus 138 ~-L~~l~p~~v~~~~~~~~~~~~~~~~~~~~~-~~~dviH~r--~~~~~~~~~G~spi~~a~~~i~~~~~a~~~~~~~f~ 213 (368) . .+.+-+..+.-. .++.-.....|...+| ...+++ || .++|..-.+--||+.++...+.-..-..+...+--+ T Consensus 157 ~eW~~vt~~ei~~~--~~~~~i~lP~g~~~e~~~~~d~l-~RiW~P~Prr~~e~DSpvra~l~~l~Ei~~lt~~i~aaak 233 (629) T protein:vir:86 157 PEWLALTPEEVRAS--EKKTIIELPTGDKHEFRDGLDGM-FRVWNPRARRAREPDSPVRANLDSLKEIVRTTKTIANASK 233 (629) T ss_pred hhheeechHHhhhc--cCceeeEcCCCCcceeeCCCceE-EEeeCCCcccccCCcchhHHHHHHHHHHHHhhhHHHHHHH Confidence 3 333444444422 2222233344444444 444554 55 567777788999999999988887777777766666 Q ss_pred ccCCCceeEEeCCCC-c--------------------cHHHHHHHHHHHH----Hh---ccccccccccccccCcc-ccc Q lcl|Aclame:pro 214 NGSHAGFILYMTDAA-Q--------------------KQEDVDTLREAMK----SA---KGPGNFRNLFMYAPNGK-KDG 264 (368) Q Consensus 214 ng~~p~gil~~~~~~-l--------------------~~e~~~~~k~~~~----~~---~g~~n~~~~~~l~~~g~-~~g 264 (368) .-.+-.|||.++... + .....+.|.+.|- .. .+..-+-.++++...++ -++ T Consensus 234 SRL~gnGvlflP~e~slP~~~~p~~~n~pg~~~p~~~~~pa~~~l~~~l~q~a~tAi~De~S~aA~vPiia~~P~E~i~~ 313 (629) T protein:vir:86 234 SRLIGNGVVFVPHEMSLPSMNAPVASNKPGAPAPPILGTPAVQQLQELLFQVAQTAYDDEDSMAALIPMFAAAPGELIKN 313 (629) T ss_pred HHHhhCceeeeccCcccCccCCCCCCCCCCcccccccccchHHHHHHHHHHHHhhhhcCCCCccceeeeeEeechHHhcC Confidence 666666776554310 1 0113344544443 11 12333444555544442 133 Q ss_pred cccccccchhhHHHHHHHHHHHHHHHHHHhCCChHHh-cccccccccccCHHHHHHHHHHHHHHHHHHHHHH-HHhh-c- Q lcl|Aclame:pro 265 IQLLPVSEVAAKDEFWNIKNVTRDDQLAAHRVPPQLM-GIIPNNTGGFGDVEKAAMVFARNEVKPLQDRLLA-INDW-I- 340 (368) Q Consensus 265 ~~~~pl~~~~~d~qf~e~~~~~~~~Ia~~fgVPp~~l-g~~~~~~~~~sn~e~~~~~f~~~tl~P~~~~ie~-l~~~-l- 340 (368) ++...+. +.-+.--+.+|+-.+..||...-|||..| |+..+.+-|.+ =|....-++-.|.|.+..|.+ |.+. | T Consensus 314 i~hlkf~-~ei~e~aiktR~daI~RlA~glDippE~LLGlGsd~NHWsA--WqI~dedvrlHI~P~l~~ic~AlT~~~Lr 390 (629) T protein:vir:86 314 VTHLKFD-NQVTEVAIKTRNDAIARLAMGLDVSPERLLGLGSNSNHWSA--WQIGDEDVRLHILPPVEMLCEAITNQVLR 390 (629) T ss_pred eeEEeec-CchhHHHHhhHHHHHHHHHhccCCchhhheeccCCccceEE--EEecccceeeecchHHHHHHHHHHhhHHH Confidence 4443333 34455678999999999999999999874 76433333321 223333455667888877753 4332 2 Q ss_pred ------C---c-ceEeechhhhhcC-Chhhhh-hhhhhcC Q lcl|Aclame:pro 341 ------G---D-EVVRFAPYALGGH-DQPAAA-PGGQRSA 368 (368) Q Consensus 341 ------~---~-~~~~F~~~~Llr~-D~~~ra-~~~~~~~ 368 (368) | . +.+-||.+.|..- |....| +..+|.| T Consensus 391 p~Le~eGiDp~kYvvW~DaS~Lt~dPd~~deA~~a~drGA 430 (629) T protein:vir:86 391 TVLMREGIDPNAYVVWHDASQLTVDPDKTDEARDAFDRGA 430 (629) T ss_pred HHHHHhCCCHHHhEeeecCcccccCCCCcHHHHHHHHcCC Confidence 1 1 2477998888543 333332 2455655 No 141 >protein:vir:99088 Length: 629 # NCBI annotation: gp12 # Family: family:all:2798 # MgeID: mge:1608 # MgeName: Qyrzula # Cross-refs: genbank:acc:YP_655692;genbank:gi:109521770;genbank:GeneID:4157810 Probab=97.28 E-value=1.9e-05 Score=46.46 Aligned_cols=358 Identities=13% Similarity=0.048 Sum_probs=170.5 Q ss_pred CCcCCCCccccccccccccccCCCcchhhccccCceEEEECCCceeccCh-HHHHHHHHHHh-------ccchhcccccH Q lcl|Aclame:pro 1 MSRNKTRRAARAASAHVRTANTDAPTEHHTDRAAQAEVFSFGDPVEVLDR-RELLDYVECMR-------MGQWYEPPMPW 72 (368) Q Consensus 1 m~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~p~~~~~~-~~~~~~~~~~~-------~~~~~~~p~~~ 72 (368) |+-.-=+..+|.++.+.. ++..+-++....-.-....+...- -+... .++.+..+|.. --+|...-+++ T Consensus 1 ma~~~lr~~rrpk~~p~~-~r~~al~aas~~i~~p~~~~~ks~--~~~~~~~WQ~eAW~~~d~v~Elry~vgW~~~s~Sr 77 (629) T protein:vir:99 1 MAPTSLRIVRRPKSEPVS-TRQRALVAASQPVENPGKAFRKAM--GSSTRTDWQDDAWKAYDAVGELRYYVGWRSSSASR 77 (629) T ss_pred CCccceeeeecCCCCChh-hhhhhhhhhhhcccccchhhhhhc--CCCchhhhhHHHHHHHHhhhhHHHHhhhhhhhhce Confidence 765544444444332221 121111111111111122221100 01111 12222222221 00111111111 Q ss_pred HHHHHHHHhcccccc---hhhhccc------hHHhhccCCCCcCHHHHHHHHHhHhhhCCeeEEEEecC------CcceE Q lcl|Aclame:pro 73 DGLARSFRAAAHHSS---AVYVKRN------ILVSTFIPHPLLSRATFERLVLDWQVFGNAYLERRENV------LGGTI 137 (368) Q Consensus 73 ~~l~~~~r~~~~~~~---~~~~~~~------~~l~~~~~n~~~~~~~~~~~~~~~ll~Gnay~~i~r~~------~G~~~ 137 (368) .. ....+.+.+.+. .+....+ .+....-..+....+.++.+..++-+-|.+|+.+.--. .|.++ T Consensus 78 ~r-L~as~idpDtg~ptg~i~e~~~~~~~v~~~v~~i~gG~lgqa~lLkr~~~~ltV~GE~wiv~~~~~~~~~d~~~~~~ 156 (629) T protein:vir:99 78 VR-LIASAIDPDTGLPTGSIDEDDRVGARVQQIVNQIAGGALGQAQLIKRVVEQLTVAGETWVAILFTDKSRLDSNGNPV 156 (629) T ss_pred ee-eEeeeecCCCCCCccccCCCchhHHHHHHHHHhhcCChhhHHHHHHHHHhheecccceEEEEeecCCCccCCCCcch Confidence 00 001122222211 1111111 11222233445556889999999999999999987322 23333 Q ss_pred E-EEEecccccccccCCCeeEEEeCCceEEEE-cCccEEEec--CCCCcCCccccchhhHHHHHHHHHHHHHHHHHHHHh Q lcl|Aclame:pro 138 R-LDTPLAKYVRRGLDLNTYFFVQNWQQPYTF-AAGSVFHLQ--EPDINQEVYGLPEYLSALNATWLNESATLFRRRYYK 213 (368) Q Consensus 138 ~-L~~l~p~~v~~~~~~~~~~~~~~~~~~~~~-~~~dviH~r--~~~~~~~~~G~spi~~a~~~i~~~~~a~~~~~~~f~ 213 (368) . .+.+-+..+.-.. ++.-.....|...+| ..-|++ || .++|..-.+--||+.++...+.-..-..+...+--+ T Consensus 157 ~eW~~vt~~ei~~~~--~~~~i~lP~g~~~e~~~~~d~l-~RiW~P~Prr~~e~DSpvra~l~~l~Ei~~lt~~i~aaak 233 (629) T protein:vir:99 157 PEWLALTPEEVRASE--KKTIIELPTGDKHEFRDGLDGM-FRVWNPRARRAREPDSPVRANLDSLKEIVRTTKTIANASK 233 (629) T ss_pred hhheeechHHhhhcc--CceeEEcCCCCccceeCCCceE-EEeeCCCcccccCCcchhHHHHHHHHHHHHhhhHHHHHHH Confidence 3 3334444444222 222233333444444 444554 55 567777788999999999988887777777766666 Q ss_pred ccCCCceeEEeCCCC-c--------------------cHHHHHHHHHHHH----Hh---ccccccccccccccCcc-ccc Q lcl|Aclame:pro 214 NGSHAGFILYMTDAA-Q--------------------KQEDVDTLREAMK----SA---KGPGNFRNLFMYAPNGK-KDG 264 (368) Q Consensus 214 ng~~p~gil~~~~~~-l--------------------~~e~~~~~k~~~~----~~---~g~~n~~~~~~l~~~g~-~~g 264 (368) .-.+-.|||.++... + .....+.|.+.|- .. .+..-+-.++++...++ -++ T Consensus 234 SRL~gnGvlflP~e~slP~~~~p~~~n~pg~~~p~~~~~pa~~~l~~~l~q~a~tAi~De~S~aA~vPiia~~P~E~i~~ 313 (629) T protein:vir:99 234 SRLIGNGVVFVPHEMSLPSMNAPVASNKPGAPAPPILGTPAVQQLQELLFQVAQTAYDDEDSMAALIPMFAAAPGELIKN 313 (629) T ss_pred HHHhhCceeEeccCcccCccCCCCCCCCCCcccccccccchHHHHHHHHHHHHhhhhcCCCCccceeeeeEeechHHhcC Confidence 666666776554310 1 0113344544443 11 12333444555544442 133 Q ss_pred cccccccchhhHHHHHHHHHHHHHHHHHHhCCChHHh-cccccccccccCHHHHHHHHHHHHHHHHHHHHHH-HHhh-c- Q lcl|Aclame:pro 265 IQLLPVSEVAAKDEFWNIKNVTRDDQLAAHRVPPQLM-GIIPNNTGGFGDVEKAAMVFARNEVKPLQDRLLA-INDW-I- 340 (368) Q Consensus 265 ~~~~pl~~~~~d~qf~e~~~~~~~~Ia~~fgVPp~~l-g~~~~~~~~~sn~e~~~~~f~~~tl~P~~~~ie~-l~~~-l- 340 (368) ++...+. +.-+.--+.+|+-.+..||...-|||..| |+..+.+-|.+ =|....-++-.|.|.+..|.+ |.+. | T Consensus 314 i~hlkf~-~ei~e~aiktR~daI~RlA~glDippE~LLGlGsd~NHWsA--WqI~dedvrlHI~P~l~~ic~AlT~~~Lr 390 (629) T protein:vir:99 314 VTHLKFD-NQVTEVAIKTRNDAIARLAMGLDVSPERLLGLGSNSNHWSA--WQIGDEDVRLHILPPVEMLCEAITNQVLR 390 (629) T ss_pred eeEEeec-CchhHHHHhhHHHHHHHHHhccCCchhhheeccCCccceEE--EEecccceeeecchhHHHHHHHHHhhHHH Confidence 4443333 34455678999999999999999999874 76433333321 123333455667888877753 4332 2 Q ss_pred ------C---c-ceEeechhhhhcC-Chhhhh-hhhhhcC Q lcl|Aclame:pro 341 ------G---D-EVVRFAPYALGGH-DQPAAA-PGGQRSA 368 (368) Q Consensus 341 ------~---~-~~~~F~~~~Llr~-D~~~ra-~~~~~~~ 368 (368) | . +.+-||.+.|..- |....| +..+|.| T Consensus 391 p~Le~eGiDp~kYvvW~DaS~Lt~dPd~~deA~~a~drGA 430 (629) T protein:vir:99 391 TVLMREGIDPNAYVVWHDASQLTVDPDKTDEARDAFDRGA 430 (629) T ss_pred HHHHHhCCCHHHhEeeecCcccccCCCCcHHHHHHHHcCC Confidence 1 1 2477898888543 333332 2455655 No 142 >protein:vir:106027 Length: 629 # NCBI annotation: gp9 # Family: family:all:2798 # MgeID: mge:1505 # MgeName: Cooper # Cross-refs: genbank:acc:YP_654906;genbank:gi:109392362;genbank:GeneID:4157055 Probab=97.28 E-value=7.4e-05 Score=43.23 Aligned_cols=358 Identities=14% Similarity=0.049 Sum_probs=178.5 Q ss_pred CCcCCCCccccccccccccccCCCcchhhccccCceEEEECCCceeccChHHHHHHHHHHhc-c------chhcccccHH Q lcl|Aclame:pro 1 MSRNKTRRAARAASAHVRTANTDAPTEHHTDRAAQAEVFSFGDPVEVLDRRELLDYVECMRM-G------QWYEPPMPWD 73 (368) Q Consensus 1 m~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~-~------~~~~~p~~~~ 73 (368) |+-.-=|..+|.+..+.+-+=..+.... .+...++..---..+...++.+..+|... + +|...-+++. T Consensus 1 ma~~~lrv~rrpk~~p~~r~l~aasqp~-----~P~~~~~~~~~g~~~~~~WQ~eAW~~~d~VgElryyvgW~~ss~Sr~ 75 (629) T protein:vir:10 1 MAASTLRVSRRPKGSPARRSLTAASQPM-----EPGRTPSRQVAGTVVRTSWQNEAWECMDLVGELRYYVGWRASSCSRV 75 (629) T ss_pred CCccceeEEecCCCccceeeeccccCCC-----CcchhhchhhhhhhhhhhhhHHHHHHHHhhhhHHHHhhhhhhhheee Confidence 7766555555555544432111111111 11222221100011222333333323211 0 1111111110 Q ss_pred HHHHHHHhccccc---chhhhccchH------HhhccCCCCcCHHHHHHHHHhHhhhCCeeEEEEecCCcc----eE-EE Q lcl|Aclame:pro 74 GLARSFRAAAHHS---SAVYVKRNIL------VSTFIPHPLLSRATFERLVLDWQVFGNAYLERRENVLGG----TI-RL 139 (368) Q Consensus 74 ~l~~~~r~~~~~~---~~~~~~~~~~------l~~~~~n~~~~~~~~~~~~~~~ll~Gnay~~i~r~~~G~----~~-~L 139 (368) .| ...+.+.+.+ ..+..+++.. ....-..+.-..+.++.+..++-+-|..|+.++--+.++ +. +. T Consensus 76 rL-~as~idpDtg~ptg~i~ed~p~~~~v~~~v~~iagG~lGqaqLlkr~~~~ltV~GE~~i~il~~~~~~pd~~~r~~W 154 (629) T protein:vir:10 76 EL-IASELDPDTGKPTGGIRDDDPDGLRFLEIVKTMAGGPLGQAQLQKRAAECLTVPGEHRICLLDQGDKNPDGSVRHNW 154 (629) T ss_pred eE-EEeeecCCCCCCccccccCchhHHHHHHHHHHhcCccchHHHHHHHHHhheeccCceEEEEeecCCCCCCcccccce Confidence 00 0112222211 1122233321 223345566677889999999999999999988544443 33 23 Q ss_pred EEecccccccccCCCeeEEEeCCceEEEEcCcc-E-EEecCCCCcCCccccchhhHHHHHHHHHHHHHHHHHHHHhccCC Q lcl|Aclame:pro 140 DTPLAKYVRRGLDLNTYFFVQNWQQPYTFAAGS-V-FHLQEPDINQEVYGLPEYLSALNATWLNESATLFRRRYYKNGSH 217 (368) Q Consensus 140 ~~l~p~~v~~~~~~~~~~~~~~~~~~~~~~~~d-v-iH~r~~~~~~~~~G~spi~~a~~~i~~~~~a~~~~~~~f~ng~~ 217 (368) +.+....|..... +.--....+|....|..+. | +.+=.++|..-..--||+.++...+.-..-..+...+--+.-.+ T Consensus 155 ~vVt~~Ei~~kg~-g~~~i~lpdg~~he~~~~~D~l~RvW~P~Prr~~e~DSpvra~l~~lrEi~r~tk~i~~aakSRL~ 233 (629) T protein:vir:10 155 YVVTNDEVKNKGA-GKTDIELPDGTIHEYSKGRDVMFRVWNPRPRRAKEPDSPVRACLDSLREIIRTTKKIRNASKSRLI 233 (629) T ss_pred eeecHHHhccccC-ceeEEEcCCCceeeeeCCCeeEEEeeCCCcccccCCcchhHHHHHHHHHHHHhhhHhHHHHHhHHh Confidence 3334444442221 2223445566666665443 2 33335667777788999999999888877777776666666666 Q ss_pred CceeEEeCCCC-c----------c----------HHHHHHHHHHHHH----hc---cccccccccccccCcccccccccc Q lcl|Aclame:pro 218 AGFILYMTDAA-Q----------K----------QEDVDTLREAMKS----AK---GPGNFRNLFMYAPNGKKDGIQLLP 269 (368) Q Consensus 218 p~gil~~~~~~-l----------~----------~e~~~~~k~~~~~----~~---g~~n~~~~~~l~~~g~~~g~~~~p 269 (368) -.|||.++... + + ....+.|.+.|-+ .. +..-+-.++++...+ |.--+++. T Consensus 234 gnGvlflP~e~slp~~~ap~~~~~Pg~~~p~~~g~aa~d~l~~~l~q~a~aAi~De~S~aA~vPiia~vP~-E~l~~ikh 312 (629) T protein:vir:10 234 GNGVVFLPQELSLPRATAPVADNQPGAPVPIVDGVAAADELSNLLFQTAAAAVDDEDSQAALIPLLATVPG-EHLQKIFH 312 (629) T ss_pred hCceeEeccCcccccccCCCCCCCCcccccccCCCcchHHHHHHHHHHHHhhhcCCCCccceeeeEEeech-HHhcCeee Confidence 66776554210 1 1 1133445544422 11 223344455554444 33335666 Q ss_pred ccch-hhHHHHHHHHHHHHHHHHHHhCCChHHh-cccccccccccCHHHHHHHHHHHHHHHHHHHHHH-HHh-hc----- Q lcl|Aclame:pro 270 VSEV-AAKDEFWNIKNVTRDDQLAAHRVPPQLM-GIIPNNTGGFGDVEKAAMVFARNEVKPLQDRLLA-IND-WI----- 340 (368) Q Consensus 270 l~~~-~~d~qf~e~~~~~~~~Ia~~fgVPp~~l-g~~~~~~~~~sn~e~~~~~f~~~tl~P~~~~ie~-l~~-~l----- 340 (368) |.+. .-+.--+.+|+-.+..+|...-|||..| |+..+.+-|.+ =|..-.-++..|.|.+..|.+ |.+ +| T Consensus 313 Lkf~~eite~~iktR~daI~RlAmglDispErLLGlGsd~NHWsA--WqI~dedvrlHI~P~l~~ic~Ait~~~Lrp~L~ 390 (629) T protein:vir:10 313 LKIGNEITEVEIKTRNDAIARLAMGLDVSPERLLGLGSNSNHWSA--WQIGDEDVQLHIKPVMEVLCAAIYREVLVATLR 390 (629) T ss_pred eeecCchhHHHHhhHHHHHHHHHhccCCChhheeeccCCccceee--EEecccceeeecchHHHHHHHHHHhHHHHHHHH Confidence 6654 3355578899999999999999999875 76434333321 223333455567777777753 433 22 Q ss_pred -----Cc-ceEeechhhhhcC-Chhhhh-hhhhhcC Q lcl|Aclame:pro 341 -----GD-EVVRFAPYALGGH-DQPAAA-PGGQRSA 368 (368) Q Consensus 341 -----~~-~~~~F~~~~Llr~-D~~~ra-~~~~~~~ 368 (368) +. +.+-||.+.|..- |....| +..+|.| T Consensus 391 ~eGiDp~~Yvvw~DaS~Lt~dPd~~deA~~a~drGa 426 (629) T protein:vir:10 391 AEGIDPDRYVLWYDASGLTVDPDKTDEATAAKEQGA 426 (629) T ss_pred HhCCCHHHhEeeecCcccccCCCCcHHHHHHHHcCC Confidence 11 2467888887543 322222 2344555 No 143 >protein:vir:9568 Length: 410 # NCBI annotation: gp34 # Family: family:all:524 # MgeID: mge:171 # MgeName: SM1 # Cross-refs: genbank:acc:NP_862873;genbank:gi:32469465;genbank:GeneID:1461310 Probab=97.00 E-value=0.00022 Score=40.66 Aligned_cols=300 Identities=11% Similarity=0.071 Sum_probs=116.7 Q ss_pred eEEEECCCceeccChHHHHHHHHHHhccchhccccc------------------HHHHHHHHHhcccccchhhhccchHH Q lcl|Aclame:pro 36 AEVFSFGDPVEVLDRRELLDYVECMRMGQWYEPPMP------------------WDGLARSFRAAAHHSSAVYVKRNILV 97 (368) Q Consensus 36 ~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~p~~------------------~~~l~~~~r~~~~~~~~~~~~~~~~l 97 (368) +..+. + ......+| +.|......+. ...++.+.....-.|-. ..+. - T Consensus 1 l~~~~-----~--r~~~~~~y----Y~g~~~~~~~~~~~p~~~~~~~~~v~nw~~~~Vds~a~rl~~~Gf~---~~d~-~ 65 (410) T protein:vir:95 1 MNLYQ-----S--RVNLRYKH----YAMQHYEAPTGITIPAHIRAKYQAVLGWAAKGVDSLADRLIFRAFA---NDDF-N 65 (410) T ss_pred CCcch-----h--hHHHHHHH----hcCCCCccccchhccHHHHhHHHhhcchhHHHHHHhHhhhcccccc---CCCc-h Confidence 00000 0 00001111 11211110000 00011111100000100 0000 0 Q ss_pred hhccCCCCcCHHHHHHHHHhHhhhCCeeEEEEecCCcceEEEEEecccccccccCCCe------e--EEEeCCce---EE Q lcl|Aclame:pro 98 STFIPHPLLSRATFERLVLDWQVFGNAYLERRENVLGGTIRLDTPLAKYVRRGLDLNT------Y--FFVQNWQQ---PY 166 (368) Q Consensus 98 ~~~~~n~~~~~~~~~~~~~~~ll~Gnay~~i~r~~~G~~~~L~~l~p~~v~~~~~~~~------~--~~~~~~~~---~~ 166 (368) ++.....|.-......+..+.+.+|.+|+.|..+.+|+| .+.+++|.++....+... + +....++. .. T Consensus 66 l~~i~~~N~ld~~~~~~~~~al~~G~sf~~v~~~~d~~~-~i~~~sP~~~~~i~Dp~~~~~~~al~~~~~~~~~~~~~~~ 144 (410) T protein:vir:95 66 VTEIFDRNNPDIFFDSAILSALIGSCSFVYISKGEDDEV-RLQVIESSNATGVIDPITGLLVEGYAVLARDDYNRPTLEA 144 (410) T ss_pred HHHHHhhcChHHHHHHHHHHHHHhCceeEEEecCCCCce-EEEEEcccceEEEEeCCCCceEEEEEEEEecCCCeEEEEE Confidence 111111111112344567788999999999999888875 678888887765544320 1 11111111 11 Q ss_pred EEcCc---------------------cEEEecCCCCcCCccccch----hhHHHHHHHHHHHHHHHHHHHHhccCCCcee Q lcl|Aclame:pro 167 TFAAG---------------------SVFHLQEPDINQEVYGLPE----YLSALNATWLNESATLFRRRYYKNGSHAGFI 221 (368) Q Consensus 167 ~~~~~---------------------dviH~r~~~~~~~~~G~sp----i~~a~~~i~~~~~a~~~~~~~f~ng~~p~gi 221 (368) .+.++ .|++|.+..-.+..+|.|- +..+.+.+.-...-......||. .|--+ T Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~g~vPvV~f~n~~~l~~~~G~s~I~~~v~~l~da~~r~~~~~~~~~e~~a---~pqr~ 221 (410) T protein:vir:95 145 YFEPNATHFIPKDGEPYSVTNETGIPLLVPVIHRPDAVRPFGRSRITRAGMYYQKYAKRTLERADITAEFYS---WPQKY 221 (410) T ss_pred EEeCCcEEEEeeCCccccccCCCCCcceEEecccccCCccCCccccchhHHHHHHHHHHHHHHHHHHHHHhc---chhhe Confidence 22222 2456653322245577774 44444444444433344455554 45444 Q ss_pred EEeCCCCccHHHHHHHHHHHHHhccccccccccccccCccccccccccccchhhHHHHHHHHHHHHHHHHHHhCCChHHh Q lcl|Aclame:pro 222 LYMTDAAQKQEDVDTLREAMKSAKGPGNFRNLFMYAPNGKKDGIQLLPVSEVAAKDEFWNIKNVTRDDQLAAHRVPPQLM 301 (368) Q Consensus 222 l~~~~~~l~~e~~~~~k~~~~~~~g~~n~~~~~~l~~~g~~~g~~~~pl~~~~~d~qf~e~~~~~~~~Ia~~fgVPp~~l 301 (368) +. +...+.+..+ .|+.. .++.+.+..+....+.++..+....-+ .|++..+..+..|+..=++|++.+ T Consensus 222 i~--G~d~d~~~~~----~~~~~-----~~~i~~~~~~~~~~~~~v~q~~~~~l~-~~~~~l~~l~~~~a~~s~lP~~~l 289 (410) T protein:vir:95 222 IL--GLDPDAEPME----KWKAT-----VSSLLTISSSDKGVKPSVGQFTTASMS-PFTEQLRTAAAGFAGEMGLTLDDL 289 (410) T ss_pred ee--ccCCCCCcCc----hhhhh-----hhhheeccCCCCCCcceEEecCCCChH-HHHHHHHHHHHHHhhhcCCCHHHh Confidence 42 2111112222 23322 223333322211234555544432222 499999999999999999999999 Q ss_pred cccccccccccCHHHHHHHHHHHHHHHHH----HHHHHHHhh-------cC---cce----Eeech--hhhhcCChhhhh Q lcl|Aclame:pro 302 GIIPNNTGGFGDVEKAAMVFARNEVKPLQ----DRLLAINDW-------IG---DEV----VRFAP--YALGGHDQPAAA 361 (368) Q Consensus 302 g~~~~~~~~~sn~e~~~~~f~~~tl~P~~----~~ie~l~~~-------l~---~~~----~~F~~--~~Llr~D~~~ra 361 (368) |....+.++..-+......+... ..-.. ..++++.+. .+ ..+ ++|.+ +.-.+ ...+.| T Consensus 290 g~~~~NpsSa~Al~a~~~~L~~k-a~~k~~~fg~~l~~~~rla~~i~~~~~~~~~~~~~~~v~W~p~~d~~~~-s~a~~a 367 (410) T protein:vir:95 290 GFVSDNPSSVEAIKASHENLRLA-GRKAQRSLGAGLLNVAYVAACLRDEFRYTRSQFVRTAVKWEPLFEADAN-TMTMIG 367 (410) T ss_pred ccccCchhHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhcCCCCcccccceeeEEeeecCCcchh-hHHHHH Confidence 96543212111111111111111 10011 111222111 11 011 22321 11111 123344 Q ss_pred hhhhhcC Q lcl|Aclame:pro 362 PGGQRSA 368 (368) Q Consensus 362 ~~~~~~~ 368 (368) |...|-+ T Consensus 368 Da~~Kl~ 374 (410) T protein:vir:95 368 DGVVKLN 374 (410) T ss_pred HHHHHHH Confidence 5444433 No 144 >protein:vir:80680 Length: 441 # NCBI annotation: gp3 # Family: family:all:524 # MgeID: mge:1884 # MgeName: PA6 # Cross-refs: genbank:acc:YP_001285579;genbank:gi:148727085;genbank:GeneID:5247051 Probab=96.99 E-value=0.00022 Score=40.62 Aligned_cols=310 Identities=10% Similarity=0.038 Sum_probs=116.7 Q ss_pred CCcCCCCcccc-ccccccccccCCCcchhhccccCceEEEECCCceeccChHHHHHHHHHHhccchhcccccHHHHHHHH Q lcl|Aclame:pro 1 MSRNKTRRAAR-AASAHVRTANTDAPTEHHTDRAAQAEVFSFGDPVEVLDRRELLDYVECMRMGQWYEPPMPWDGLARSF 79 (368) Q Consensus 1 m~~~k~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~ 79 (368) ..+.+. ..++ ..+...+..+...+... .... .+.+.... ++....-+..|..+ T Consensus 20 ~~r~~~-l~~Yy~G~~~i~~~~~~~~~~~-----~~~k--------~~~n~~~~-----ivd~~~~~l~~~g~------- 73 (441) T protein:vir:80 20 SSWHCC-IEGYYEGSNRVRDLGVAIPPEL-----QRVQ--------TVVSWPGI-----AVDALEERLDWLGW------- 73 (441) T ss_pred HHHHHH-HHHHHhcCCcchhcCcccchhh-----hhhh--------hhcchHHH-----HHHHHHhhhccccc------- Confidence 111000 0010 00100000000000000 0000 01111100 11100000001100 Q ss_pred HhcccccchhhhccchHHhhccCCCCcCHHHHHHHHHhHhhhCCeeEEEEecCCcceEEEEEecccccccccCCCe---- Q lcl|Aclame:pro 80 RAAAHHSSAVYVKRNILVSTFIPHPLLSRATFERLVLDWQVFGNAYLERRENVLGGTIRLDTPLAKYVRRGLDLNT---- 155 (368) Q Consensus 80 r~~~~~~~~~~~~~~~~l~~~~~n~~~~~~~~~~~~~~~ll~Gnay~~i~r~~~G~~~~L~~l~p~~v~~~~~~~~---- 155 (368) +. +. +..+ ....+.+.-......+..+.+.+|.||..+.++.+|.+ .+..++|..+.+..+... T Consensus 74 ~~-~d---------~~~l-~~i~~~n~~~~~~~~~~~~~~~~G~a~~~v~~d~~g~~-~i~~~~p~~~~~i~d~~~~~~~ 141 (441) T protein:vir:80 74 TN-GD---------GYGL-DGVYAANRLATASCDVHLDALIFGLSFVAIIPHGDGTV-SVRPQSPKNCTGKFSADGSRLD 141 (441) T ss_pred cC-CC---------hHHH-HHHHHhcCHHHHHHHHHHHHhhcCeeEEEEEeCCCCce-EEEEEccceEEEEEeCCCCcee Confidence 00 00 0000 00001111234556677899999999999999988876 577888877765433210 Q ss_pred ----eEEEeC----------CceEEEE-----------cC-------ccEEEecCCCCcCCccccchhh----HHHHHHH Q lcl|Aclame:pro 156 ----YFFVQN----------WQQPYTF-----------AA-------GSVFHLQEPDINQEVYGLPEYL----SALNATW 199 (368) Q Consensus 156 ----~~~~~~----------~~~~~~~-----------~~-------~dviH~r~~~~~~~~~G~spi~----~a~~~i~ 199 (368) +|.... .+..++| .. =.|+||.+..-.+..+|.|.+. .+.+.+. T Consensus 142 ~~~~~~~~~~~~~~~~~vy~~~~~~~~~~~~~~~~~~~~~~~~~~g~vPvv~~~n~~~~~~~~G~s~l~~~v~~liDa~~ 221 (441) T protein:vir:80 142 AGLVVQQTCDPEVVEAELLLPDVIVQVERRGSREWVEVDRIPNVLGAVPLVPIVNRRRTSRIDGRSEITRSIRAYTDEAV 221 (441) T ss_pred EEEEEEEEecCceEEEEEEecCeEEEEEEcCCcceeeccccccCCCceeEEEeeccccCCccCCcccchhhHHHHHHHHH Confidence 010000 1111111 00 0256776543345667888553 3333333 Q ss_pred HHHHHHHHHHHHHhccCCCceeEEeCCCCccHHHHHHHHHHHHHhccccccccccccccCccccccccccccchhhHHHH Q lcl|Aclame:pro 200 LNESATLFRRRYYKNGSHAGFILYMTDAAQKQEDVDTLREAMKSAKGPGNFRNLFMYAPNGKKDGIQLLPVSEVAAKDEF 279 (368) Q Consensus 200 ~~~~a~~~~~~~f~ng~~p~gil~~~~~~l~~e~~~~~k~~~~~~~g~~n~~~~~~l~~~g~~~g~~~~pl~~~~~d~qf 279 (368) ....-..-...+| +.|--+| .+..++++..+. |+. ..++++.+..++...++++..+.... -..| T Consensus 222 ~~~s~~~~~~~~~---~~~~~~i--~G~~~~~~~~~~----~~~-----~~~~i~~~~~~~~~~~~~~~~~~~~~-~~~~ 286 (441) T protein:vir:80 222 RTLLGQSVNRDFY---AYPQRWV--TGVSADEFSQPG----WVL-----SMASVWAVDKDDDGDTPNVGSFPVNS-PTPY 286 (441) T ss_pred HHHHHHHHHHHhh---cCceeee--ecCCccccccch----hhh-----cccccccCCCCCCCCcceeEecCccc-hHHH Confidence 3333222233333 3454444 343344332221 221 12333333333322334554433222 2238 Q ss_pred HHHHHHHHHHHHHHhCCChHHhcccccccccccCHHHHHHHHHHHHHHHHHHHHH--------HHH----hhcCc----- Q lcl|Aclame:pro 280 WNIKNVTRDDQLAAHRVPPQLMGIIPNNTGGFGDVEKAAMVFARNEVKPLQDRLL--------AIN----DWIGD----- 342 (368) Q Consensus 280 ~e~~~~~~~~Ia~~fgVPp~~lg~~~~~~~~~sn~e~~~~~f~~~tl~P~~~~ie--------~l~----~~l~~----- 342 (368) ++..+..+..|+..-++|++.+|....+.++ .+. ..+....|.-.+.+.+ ++. ..++. T Consensus 287 ~~~l~~~i~~~~~~~~~p~~~~g~~~~~~~S---g~A--l~~~~~~l~~k~~~~~~~f~~~l~~~~~l~~~~~~~~~~~~ 361 (441) T protein:vir:80 287 SDQMRLLAQLTAGEAAVPERYFGFITSNPPS---GEA--LAAEESRLVKRAERRQTSFGQGWLSVGFLAAKALDSRVDEA 361 (441) T ss_pred HHHHHHHHHHHhcccCCCHHHhccCCCcchH---HHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccc Confidence 8888888999999999999999864332111 111 1122222222111111 111 11110 Q ss_pred ---ceEeechhhhhcCChhhhhhhhhhcC Q lcl|Aclame:pro 343 ---EVVRFAPYALGGHDQPAAAPGGQRSA 368 (368) Q Consensus 343 ---~~~~F~~~~Llr~D~~~ra~~~~~~~ 368 (368) .-+++....-+--|....|+...+.+ T Consensus 362 ~~~~~i~~~f~~~~~~~~~e~ad~~~kl~ 390 (441) T protein:vir:80 362 DFFGDVGLRWRDASTPTRAATADAVTKLV 390 (441) T ss_pred ccceeeeEEeCCCCCcCHHHHHHHHHHHH Confidence 01222222222334444444433321 No 145 >protein:vir:95254 Length: 488 # NCBI annotation: Phage conserved protein # Family: family:all:2372 # MgeID: mge:1561 # MgeName: Felix 01 # Cross-refs: genbank:acc:NP_944885;genbank:gi:158267601;genbank:GeneID:2744039 Probab=96.91 E-value=0.00026 Score=40.22 Aligned_cols=342 Identities=12% Similarity=0.043 Sum_probs=130.7 Q ss_pred CCcCCCCccccccccccccccCCCcc--hhhccccC--ceEEEECCCceeccChHHHHHHHHHHhccchhcccccHHHHH Q lcl|Aclame:pro 1 MSRNKTRRAARAASAHVRTANTDAPT--EHHTDRAA--QAEVFSFGDPVEVLDRRELLDYVECMRMGQWYEPPMPWDGLA 76 (368) Q Consensus 1 m~~~k~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~--~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~ 76 (368) |+-.-.. .++-.|. +-....+. ....+ +-+|.++|.....+..+.-+.....+..-+..+.+. T Consensus 1 ~~~~~~~------------~~gl~p~rl~~i~~~~~~~~~~~~-~~~~~~~Lr~~~~~~ly~~m~~D~hi~s~l~~Rk~a 67 (488) T protein:vir:95 1 MADITET------------QESLPPFRMGEVGSLGLKVKNGRI-YEEPRQALRFPESIKTFQLMMRDPAVAASVNIIKMF 67 (488) T ss_pred CCCcccc------------CCCCCHHHHHHHHHHhhccccchh-hccchhhhcccchHHHHHHHhhChHHHHHHHHHHHH Confidence 3311110 0000000 00000000 00000 112222222111111111111011111100000000 Q ss_pred HH---HHhcccccchhhhcc---chHHhhccCCCCcCHHHHHHHH---HhHhhhCCeeEEEEecC-------------Cc Q lcl|Aclame:pro 77 RS---FRAAAHHSSAVYVKR---NILVSTFIPHPLLSRATFERLV---LDWQVFGNAYLERRENV-------------LG 134 (368) Q Consensus 77 ~~---~r~~~~~~~~~~~~~---~~~l~~~~~n~~~~~~~~~~~~---~~~ll~Gnay~~i~r~~-------------~G 134 (368) .. .+..+.++.....+. ...+.....+-.. .|+.++ ++.+.+|-+..++++.. +| T Consensus 68 v~~~~w~v~p~~~~~~d~~~~~~a~~v~~~l~~~~~---~~~~~i~~~lda~~~G~s~~Eivw~~~~~~~~~~~~~~~dg 144 (488) T protein:vir:95 68 VRKVNWRFVPPKGKEQDPKMLERADFFNSLMDDMEH---DWADFINSVMSFCTYGFCVNEKVYKKRQGKKGKYQSKFDDG 144 (488) T ss_pred HhcCCceEecCCCCchhHHHHHHHHHHHHHHhccCc---cHHHHHHHHHHhhcccceeeeeeeeccccccccccccccCC Confidence 00 000000000000000 0000011111111 133333 35668899999998743 22 Q ss_pred --ceEEEEEecccc---cccccCCCeeEEEe----------------CCceEEEEcCccEEEecCCCCcCCccccchhhH Q lcl|Aclame:pro 135 --GTIRLDTPLAKY---VRRGLDLNTYFFVQ----------------NWQQPYTFAAGSVFHLQEPDINQEVYGLPEYLS 193 (368) Q Consensus 135 --~~~~L~~l~p~~---v~~~~~~~~~~~~~----------------~~~~~~~~~~~dviH~r~~~~~~~~~G~spi~~ 193 (368) .|..|.+.++.. +....++....... .......+++...|+.++....+..||.+.+.. T Consensus 145 ~~~~~~i~~Rpq~~~~~f~~d~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~lP~~kfi~~~~~~~~g~p~g~gLlr~ 224 (488) T protein:vir:95 145 LIGWAKLPIRNQSTLDKWYFDEDFRRVTGVRQNLRNVSHIAGAINLGERPLTRKLPRAKFMLFKYDDEYGNPEGRSPLLN 224 (488) T ss_pred eeeeeeeeecCcccccceeeccCCCceeecccccccccccccccccccccccccccccceEEEeecCCCCccchhhHHHH Confidence 255666666643 33322222111110 011234566666554444333567899999999 Q ss_pred HHHHHHHHHHHHHHHHHHHhccCCCceeEEeCCC---CccHHHHHHHHHHHHH----hccccccccccccccCccc---- Q lcl|Aclame:pro 194 ALNATWLNESATLFRRRYYKNGSHAGFILYMTDA---AQKQEDVDTLREAMKS----AKGPGNFRNLFMYAPNGKK---- 262 (368) Q Consensus 194 a~~~i~~~~~a~~~~~~~f~ng~~p~gil~~~~~---~l~~e~~~~~k~~~~~----~~g~~n~~~~~~l~~~g~~---- 262 (368) +......-....++...|...-+.|--+.+.+-. .-++++.+.+.+...+ ..++..++. ++ +.|.+ T Consensus 225 ~~w~~~fK~~~~~~w~~f~Er~g~g~p~~~~p~~~~~~~~~~e~~~l~~a~~~i~~~~~~~~~ag~--ii-P~g~~~~~k 301 (488) T protein:vir:95 225 AYVPWKYKVQIEEYEAVGVSRDLVGMPKIGLPPDYLDENAEPEKKAFVQYCKTVVNDMIANDRAGL--IW-PRYIDPDTK 301 (488) T ss_pred HHHHHHHHHHHHHHHHHHHHHhcccceeEeeccCCCCCcccHHHHHHHHHHHHHHHHhhccchhhe--ee-ccccccccc Confidence 9999998888889888888754333333333211 1233333333333332 222222332 22 22211 Q ss_pred -cccccccccch-hhHHHHHHHHHHHHHHHHHHhCCChHHhccc----ccccccccCHHHHHHHHHHHHHHHHHHHHHH- Q lcl|Aclame:pro 263 -DGIQLLPVSEV-AAKDEFWNIKNVTRDDQLAAHRVPPQLMGII----PNNTGGFGDVEKAAMVFARNEVKPLQDRLLA- 335 (368) Q Consensus 263 -~g~~~~pl~~~-~~d~qf~e~~~~~~~~Ia~~fgVPp~~lg~~----~~~~~~~sn~e~~~~~f~~~tl~P~~~~ie~- 335 (368) ..++++-++.. ..-..|.+.-++.-++|+++. +|.. .+++++++..+.... -..+.+.-.++.|++ T Consensus 302 ~~~~e~~l~~~~~~~~~~~~~li~~~d~~Isk~i------LGqtLT~~~~~~Gs~Al~~vh~e-v~~~i~~aDa~~i~~t 374 (488) T protein:vir:95 302 EDIFEFSLVSRQGAKAYDTGSIIDRYSKQIMMAF------MSDVLAMGQSKYGSFSLADSKTS-LLAMSVDILLKQIKNV 374 (488) T ss_pred hhhhhhhccccccCCchhHHHHHHHHHHHHHHHH------hccccccccCcchhhhHHHHHHH-HHHHHHHHHHHHHHHH Confidence 12233333322 222346666777778888876 4432 122233332222222 222333444444442 Q ss_pred HHhhc---------Cc--ceEeechhhhhcCChhhhhhhhhhcC Q lcl|Aclame:pro 336 INDWI---------GD--EVVRFAPYALGGHDQPAAAPGGQRSA 368 (368) Q Consensus 336 l~~~l---------~~--~~~~F~~~~Llr~D~~~ra~~~~~~~ 368 (368) +|+.| ++ .+.+|-.+....-|.++.|+.-++-+ T Consensus 375 ln~~li~~l~~~Nfg~~~~~P~~~~~~~e~~Dl~~~ae~~~~L~ 418 (488) T protein:vir:95 375 INRDLVAQTYALNMWDDEEHVQITYDDIETPDLEAIGSYIQKTV 418 (488) T ss_pred HHHHHHHHHHHhcCCCCCCccEEEecCcChhhHHHHHHHHHHHH Confidence 44432 11 12233334444556667776666543 No 146 >protein:vir:9751 Length: 422 # NCBI annotation: putative structural protein # Family: family:all:524 # MgeID: mge:175 # MgeName: 315.3 # Cross-refs: genbank:acc:NP_795513;genbank:gi:28876291;genbank:GeneID:1257832 Probab=96.76 E-value=0.00035 Score=39.50 Aligned_cols=294 Identities=9% Similarity=0.038 Sum_probs=116.6 Q ss_pred cChHHHH---HH----------HHHHhccchhc--ccccH-HHHHHHHHhc-ccccchhhh-------c---cchHHhhc Q lcl|Aclame:pro 48 LDRRELL---DY----------VECMRMGQWYE--PPMPW-DGLARSFRAA-AHHSSAVYV-------K---RNILVSTF 100 (368) Q Consensus 48 ~~~~~~~---~~----------~~~~~~~~~~~--~p~~~-~~l~~~~r~~-~~~~~~~~~-------~---~~~~l~~~ 100 (368) |+.+.+- .. ..-++.|.... .++.. ..+..+.+.- ++-...+.. + .+...++. T Consensus 1 m~~~~i~~L~~~~~~~~~r~~~~~~yy~g~~~~~~~~~~~p~~~~~~~~~v~nw~~~~Vd~~a~rl~~~Gf~~~d~~l~~ 80 (422) T protein:vir:97 1 MNYMGMGYLRRKLALFKTGVDKRYRYYAMDDRDDTRSIVMPNNVREMYRSVLEWTAKGVDSLADRIIFREFTNDDFNAWE 80 (422) T ss_pred CChHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhcCccccHHHHHHHHhhcchhHHHHHHHHhccccceeeCCchhHHH Confidence 3322211 10 00111221110 11100 1111111110 111000000 0 00000000 Q ss_pred cCCCCcCHHHHHHHHHhHhhhCCeeEEEEecC-CcceEEEEEecccccccccCCCe------e--EEEeCCceE---EEE Q lcl|Aclame:pro 101 IPHPLLSRATFERLVLDWQVFGNAYLERRENV-LGGTIRLDTPLAKYVRRGLDLNT------Y--FFVQNWQQP---YTF 168 (368) Q Consensus 101 ~~n~~~~~~~~~~~~~~~ll~Gnay~~i~r~~-~G~~~~L~~l~p~~v~~~~~~~~------~--~~~~~~~~~---~~~ 168 (368) ..+.|.--.....+..+.+.+|.+|+.|.++. +|.| .+.+++|.++....+... + +....+|.. ..+ T Consensus 81 ~w~~N~ld~~~~~~~~~al~~G~sf~~v~~~~~~~~p-~i~~~sp~~~~~i~D~~~~~~~~a~~~~~~~~~~~~~~~~~~ 159 (422) T protein:vir:97 81 IFKANNPDIFFDTAIQSALIASCCFVYIMPGAEDGLP-KMQVIEASKATGILDPTTFLLTEGYAILESDSNGNPTLEAYF 159 (422) T ss_pred HHHhcChHHHHHHHHHHHHHhcceeEEEeeCCCCCee-EEEEechhhEEEEEeCCCCcceeeEEEEEecCCCcEEEEEEE Confidence 00111111233355678899999999999874 5665 588888888765543221 1 111111211 111 Q ss_pred cCc---------------------cEEEecCCCCcCCccccchh----hHHHHHHHHHHHHHHHHHHHHhccCCCceeEE Q lcl|Aclame:pro 169 AAG---------------------SVFHLQEPDINQEVYGLPEY----LSALNATWLNESATLFRRRYYKNGSHAGFILY 223 (368) Q Consensus 169 ~~~---------------------dviH~r~~~~~~~~~G~spi----~~a~~~i~~~~~a~~~~~~~f~ng~~p~gil~ 223 (368) ..+ -|++|.+..-....+|.|.| ..+.+.+.-...-......||. .|--++. T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~g~vPvv~~~n~~~~~~~~G~s~I~e~v~~l~da~~r~~~~~~~~~e~~a---~pqr~i~ 236 (422) T protein:vir:97 160 TDKDIWYYPKKGKPYNIKNPTGHPLLVPIIHRPDAVRPFGRSRITKAGMYHQKAAKRTLERAEVTAEFYS---FPQKYVL 236 (422) T ss_pred cCceEEEEcCCCccccccCCCCCcceEEecccCCCccccCccccchhHHHHHHHHHHHHHHHHHHHHHhc---chhhhhc Confidence 111 25666654333566888865 2333333333322233344444 3443432 Q ss_pred eCCCCccHHHHHHHHHHHHHhccccccccccccccCccccccccccccchhhHH-HHHHHHHHHHHHHHHHhCCChHHhc Q lcl|Aclame:pro 224 MTDAAQKQEDVDTLREAMKSAKGPGNFRNLFMYAPNGKKDGIQLLPVSEVAAKD-EFWNIKNVTRDDQLAAHRVPPQLMG 302 (368) Q Consensus 224 ~~~~~l~~e~~~~~k~~~~~~~g~~n~~~~~~l~~~g~~~g~~~~pl~~~~~d~-qf~e~~~~~~~~Ia~~fgVPp~~lg 302 (368) +...+....+ .|+.. .++.+.+..+....++++..+... ++ .|++..+..+.+|+..=++|++.+| T Consensus 237 --G~d~d~~~~~----~~~~~-----~~~i~~~~~de~~~~~~v~q~~~~--~l~~~~~~l~~~~~~~a~~s~lP~~~lg 303 (422) T protein:vir:97 237 --GMDPDAKPME----KWRAT-----VSTLLEISKDEDGDKPTVGQFTTA--SMAPFMEHLKMYASLFAGGSGLTLDDLG 303 (422) T ss_pred --ccCcccccCc----hhhhh-----hhhhhccCCCCCCCcceeeecCCC--ChhHHHHHHHHHHHHHhcccCCCHHHhc Confidence 2111111111 23322 123333322211234555544433 33 4999999999999999999999999 Q ss_pred ccccccccccCHHHHHHHHHHHHHHHHHHHHH-----------HHHh-------hcCc---c----eEeechhhhhcCCh Q lcl|Aclame:pro 303 IIPNNTGGFGDVEKAAMVFARNEVKPLQDRLL-----------AIND-------WIGD---E----VVRFAPYALGGHDQ 357 (368) Q Consensus 303 ~~~~~~~~~sn~e~~~~~f~~~tl~P~~~~ie-----------~l~~-------~l~~---~----~~~F~~~~Llr~D~ 357 (368) ....+.++...+. ....|+.++.+ ++.+ .... . .++|. ...-.|. T Consensus 304 ~~~~NpsSa~Ai~--------a~~~~L~~ka~~k~~~fg~~l~~~~rla~~~~~~~~~~~~~~~~~~~~w~--p~~~~~~ 373 (422) T protein:vir:97 304 FPSDNPSSVESIK--------AAHENLRAAGRKAQRSFSSGFLNVAYIAVCLRDEFPYLRNQFMDTVIKWE--PLFEADA 373 (422) T ss_pred cccCchhHHHHHH--------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhhccceEEEc--cCCCCCh Confidence 7543212221222 12222222221 1111 1110 0 13343 2222332 Q ss_pred h---hhhhhhhhcC Q lcl|Aclame:pro 358 P---AAAPGGQRSA 368 (368) Q Consensus 358 ~---~ra~~~~~~~ 368 (368) . ..|+...|-+ T Consensus 374 ~s~a~~aDa~~Kl~ 387 (422) T protein:vir:97 374 NMLTLVGDGAIKLN 387 (422) T ss_pred HHHHHHHHHHHHHH Confidence 2 2344434432 No 147 >protein:vir:1634 Length: 409 # NCBI annotation: Structural protein # Family: family:all:524 # MgeID: mge:33 # MgeName: r1t # Cross-refs: genbank:acc:NP_695055;genbank:gi:23455746;genbank:GeneID:955506 Probab=96.63 E-value=0.00045 Score=38.91 Aligned_cols=302 Identities=9% Similarity=0.066 Sum_probs=118.6 Q ss_pred cChHHHHHHHHH-------------Hhccchhc--ccccH-HHHHHHHHh-cccccchhhh-------c---cchHHhhc Q lcl|Aclame:pro 48 LDRRELLDYVEC-------------MRMGQWYE--PPMPW-DGLARSFRA-AAHHSSAVYV-------K---RNILVSTF 100 (368) Q Consensus 48 ~~~~~~~~~~~~-------------~~~~~~~~--~p~~~-~~l~~~~r~-~~~~~~~~~~-------~---~~~~l~~~ 100 (368) |+...+-..... ++.|.... .++.. ..+....+. .++-..++.. + .+..-++. T Consensus 1 ~~~~~i~~L~~~~~~~~~r~~~~~~yY~g~~~~~~~~~~~p~~~~~~~~~v~nw~~~iVds~a~rl~~~Gf~~~d~~l~~ 80 (409) T protein:vir:16 1 MTEKGIGYLRFKLSVHKRRAEMRYEQYAMKHVDRFKGITIPQALSQQYRSILGWCAKGVDSLADRLVFREFENDDFTVNE 80 (409) T ss_pred CCHHHHHHHHHHHHHHhHHHHHHHHHHhccCchhhcchhhhHHHHHHHhhhcChhHHHHHHhHhhcccccccCcchHHHH Confidence 333222111111 11121100 00000 011111111 0010000000 0 00000000 Q ss_pred cCCCCcCHHHHHHHHHhHhhhCCeeEEEEecCCcceEEEEEecccccccccCCC------eeEEEe--CCceE---EEEc Q lcl|Aclame:pro 101 IPHPLLSRATFERLVLDWQVFGNAYLERRENVLGGTIRLDTPLAKYVRRGLDLN------TYFFVQ--NWQQP---YTFA 169 (368) Q Consensus 101 ~~n~~~~~~~~~~~~~~~ll~Gnay~~i~r~~~G~~~~L~~l~p~~v~~~~~~~------~~~~~~--~~~~~---~~~~ 169 (368) ....|.-......+..+.+.+|.+|+.|..+.+|+| .+.+++|.++....+.. .+.... .++.. ..+. T Consensus 81 i~~~N~ld~~~~~~~~~al~yG~sf~~v~~~~dg~~-~i~~~sP~~~~~i~D~~~~~~~~a~~~~~~d~~~~~~~~~~~~ 159 (409) T protein:vir:16 81 IFEENNPDIFFDSTVLSALIASCSFTYISKGENDAV-RLQVIEATNATGIIDPITGLLTEGYAVLERDENNNVVLEAHFL 159 (409) T ss_pred HHHhcChhHHHHHHHHHHHHhCceeEEEecCCCCce-EEEEEcccceEEEeecccccceeeeEEEEecCCCceEEEEEEe Confidence 000111112333556788899999999999888875 67788887766544321 011110 11110 0111 Q ss_pred Cc----------------------cEEEecCCCCcCCccccchh----hHHHHHHHHHHHHHHHHHHHHhccCCCceeEE Q lcl|Aclame:pro 170 AG----------------------SVFHLQEPDINQEVYGLPEY----LSALNATWLNESATLFRRRYYKNGSHAGFILY 223 (368) Q Consensus 170 ~~----------------------dviH~r~~~~~~~~~G~spi----~~a~~~i~~~~~a~~~~~~~f~ng~~p~gil~ 223 (368) ++ .|++|.+..-.++.+|.|.| ..+.+.+.-...-......||. .|--++. T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~g~vPvV~f~n~~~~~~~~G~seI~~~v~~l~da~~r~~~~~~~~~e~~a---~pqr~i~ 236 (409) T protein:vir:16 160 PDRTDYYYRDSRNNISIANPTGNPLLVPIIHRPDAVRPFGRSRITRSGMYWQSNAKRTLERADVTAEFYS---FPQKYVT 236 (409) T ss_pred cCcEEEEEecCccccceecCCCCcceEEecccccccccCCccccchhHHHHHHHHHHHHHHHHHHHHHhc---ChhheeE Confidence 11 25666543223466787744 4444555544444444555654 3554443 Q ss_pred eCCCCccHHHHHHHHHHHHHhccccccccccccccCccccccccccccchhhHHHHHHHHHHHHHHHHHHhCCChHHhcc Q lcl|Aclame:pro 224 MTDAAQKQEDVDTLREAMKSAKGPGNFRNLFMYAPNGKKDGIQLLPVSEVAAKDEFWNIKNVTRDDQLAAHRVPPQLMGI 303 (368) Q Consensus 224 ~~~~~l~~e~~~~~k~~~~~~~g~~n~~~~~~l~~~g~~~g~~~~pl~~~~~d~qf~e~~~~~~~~Ia~~fgVPp~~lg~ 303 (368) +...+.+..+ .|+.. .++.+.+..+....+.++..+....-+ .|++..+..+.+++..=++|++.+|. T Consensus 237 --G~d~d~~~~~----~~~~~-----~~~i~~~~~d~~g~~~~v~q~~~~~l~-~~~~~l~~~~~~~a~~s~lP~~~lg~ 304 (409) T protein:vir:16 237 --GLSDDAEPME----TWKAT-----VSSMLQFTKDEDGDKPTLGQFTQPSMS-PFTEQLRTAAAGFAGETGLTLDDLGF 304 (409) T ss_pred --ecCCCCCccc----hhhhh-----hhHhhccCCCCCCCCceEEecCCCChh-HHHHHHHHHHHHHhhhcCCCHHHccc Confidence 2111112222 23322 122333322211234555555433222 49999999999999999999999997 Q ss_pred cccccccccCHHHHHHHHHHHHHHHHHH----HHHHHHhh-------cCc---c----eEeechhhhhcCC---hhhhhh Q lcl|Aclame:pro 304 IPNNTGGFGDVEKAAMVFARNEVKPLQD----RLLAINDW-------IGD---E----VVRFAPYALGGHD---QPAAAP 362 (368) Q Consensus 304 ~~~~~~~~sn~e~~~~~f~~~tl~P~~~----~ie~l~~~-------l~~---~----~~~F~~~~Llr~D---~~~ra~ 362 (368) ...+.++..-+..+.......+ .-..+ .++++.+. .+. + .++|. ...--+ ..+.|| T Consensus 305 ~~~NpsSa~Ai~a~~~~L~~ka-~~k~~~fg~~l~~~~rla~~~~~~~~~~~~~~~~~~v~W~--~~~~~~~~s~a~~aD 381 (409) T protein:vir:16 305 VSDNPSSVEAIKASHENLRLAG-RKAQRSLGAGLLNVAYLAACLRDDVPYLREQFSKTKPKWE--PLFEADASMLSLIGD 381 (409) T ss_pred ccCchhHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhcCCCccchhhccceEEec--CCCCcchhhHHHHHH Confidence 5432222212222211111111 00111 11111111 111 0 12342 111111 233444 Q ss_pred hhhhcC Q lcl|Aclame:pro 363 GGQRSA 368 (368) Q Consensus 363 ~~~~~~ 368 (368) ...|-+ T Consensus 382 a~~Kl~ 387 (409) T protein:vir:16 382 GAIKLN 387 (409) T ss_pred HHHHHH Confidence 444444 No 148 >protein:vir:107517 Length: 639 # NCBI annotation: gp8 # Family: family:all:2798 # MgeID: mge:1481 # MgeName: PG1 # Cross-refs: genbank:acc:NP_943786;genbank:gi:38638411;genbank:GeneID:2657197 Probab=96.62 E-value=0.00011 Score=42.34 Aligned_cols=352 Identities=11% Similarity=0.038 Sum_probs=174.2 Q ss_pred CCcCCCCccccccccccccccCCCcchhhccccCceEEEE---CCCceeccChHHHHH---HHHH---------Hhccch Q lcl|Aclame:pro 1 MSRNKTRRAARAASAHVRTANTDAPTEHHTDRAAQAEVFS---FGDPVEVLDRRELLD---YVEC---------MRMGQW 65 (368) Q Consensus 1 m~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~g~p~~~~~~~~~~~---~~~~---------~~~~~~ 65 (368) |+-.-=+..+|.++.+.-+.+ ..-++++-.......+|. +|.. ...++.+ |+.. |+.+++ T Consensus 1 ma~~~lr~~rrpk~~p~~~rr-~~ltaAsq~~~~p~~~~kt~~~~~a----r~~WQ~eAW~~~d~v~Elry~vgW~~~s~ 75 (639) T protein:vir:10 1 MAATSLRVVRRPKGSAPAARR-RSLTAASQLITDPQKQMKTSLMGTA----RNEWQSEAWDFSESIGELSYYVSWRANSC 75 (639) T ss_pred CCccceeeeecCCCCCcchhh-HHHhhhhhccCCcccchhhhccccc----hhhhhhhhhhhhhhhhhHHHHhhhhhhhh Confidence 765544444444333311111 000000000011112221 2210 0111111 1111 221222 Q ss_pred hcccccHHHHHHHHHhccccc-----chhhhccc--hH---HhhccCCCCcCHHHHHHHHHhHhhhCCeeEEEE-ecCCc Q lcl|Aclame:pro 66 YEPPMPWDGLARSFRAAAHHS-----SAVYVKRN--IL---VSTFIPHPLLSRATFERLVLDWQVFGNAYLERR-ENVLG 134 (368) Q Consensus 66 ~~~p~~~~~l~~~~r~~~~~~-----~~~~~~~~--~~---l~~~~~n~~~~~~~~~~~~~~~ll~Gnay~~i~-r~~~G 134 (368) +..-+- ..+.+.+.+ ..++.+.. .. ....-..+.-..+.++.++.++-+-|.+|+.++ |.+++ T Consensus 76 sr~rL~------as~idpDtg~PtG~V~~E~d~~~~~v~~~v~~iagG~lGqa~llkr~~~~ltV~GE~wi~~l~r~~k~ 149 (639) T protein:vir:10 76 SRTTLI------PSAIDPDTGLPTGEVDIEEDPDAQTVADYVKGIADGPLGQAALIKRAVECMTVVGEVWIAVLIRQEKD 149 (639) T ss_pred ceeeeE------eeeeccccCCCCCccccccccCcchHHHHHHhhcCccchHHHHHHHHHhheecccceEEEEEEecCcc Confidence 221111 112222222 11122211 11 122334556667889999999999999998754 44433 Q ss_pred c------eEEEEEe-cccccccccCCCeeEEEeCCceEEEEcCcc--EEEecCCCCcCCccccchhhHHHHHHHHHHHHH Q lcl|Aclame:pro 135 G------TIRLDTP-LAKYVRRGLDLNTYFFVQNWQQPYTFAAGS--VFHLQEPDINQEVYGLPEYLSALNATWLNESAT 205 (368) Q Consensus 135 ~------~~~L~~l-~p~~v~~~~~~~~~~~~~~~~~~~~~~~~d--viH~r~~~~~~~~~G~spi~~a~~~i~~~~~a~ 205 (368) - +.+-|.+ ....|.. +.+++.-....+|...+|..+- ++.+=.++|..-.+--||+.++...+.-..... T Consensus 150 ~~~~~~~~~~~W~vvs~~Ei~~-~~~~~~~i~lPdG~~he~~~~~d~l~RvW~P~prr~~e~dSpvra~l~~l~Ei~~~t 228 (639) T protein:vir:10 150 PVTGLAAPRARWYAVTREEIKS-KAGETAEISLPDGKTHEFNRDLDSLVRIWNPRPRKASQATSPVRACLETLREIERTT 228 (639) T ss_pred ccCcccccccceeeeeHHHhcc-cCCCeeEeecCCCCCccccCCCceEEEEeCCCcccccCCcchhHHHHHHHHHHHHhh Confidence 2 3333433 3344442 2233333444466666665443 333335677777889999999999888877777 Q ss_pred HHHHHHHhccCCCceeEEeCCCCc------------------------cHHHHHHHHHHHHH----h---cccccccccc Q lcl|Aclame:pro 206 LFRRRYYKNGSHAGFILYMTDAAQ------------------------KQEDVDTLREAMKS----A---KGPGNFRNLF 254 (368) Q Consensus 206 ~~~~~~f~ng~~p~gil~~~~~~l------------------------~~e~~~~~k~~~~~----~---~g~~n~~~~~ 254 (368) +...+--+.-.+-.|||.+|.... ...+.+.|.+.|-+ . .+..-+-.++ T Consensus 229 ~~i~aaakSRl~gnGvlfvP~els~p~~~~p~~~~~~~~pg~~v~~~~~~~a~d~l~~~l~qaa~tai~De~S~aA~vPi 308 (639) T protein:vir:10 229 RKIKNAAKSRVMNNGVLFVPAEMSLPAAQAPIPAGQAQIPGAPVPEVSGVPASEQLATMIYQASVAAMEDENSQAAYIPL 308 (639) T ss_pred hHHHHHHHHHHhhCceeeeccccCCCCccccccccccccCcccccccCCccchHHHHHHHHHHHHhhhcCCCCccceeee Confidence 777666666666677766553210 00123344444422 1 1233344455 Q ss_pred ccccCccccccccccccch-hhHHHHHHHHHHHHHHHHHHhCCChHHh-cccccccccccCHHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 255 MYAPNGKKDGIQLLPVSEV-AAKDEFWNIKNVTRDDQLAAHRVPPQLM-GIIPNNTGGFGDVEKAAMVFARNEVKPLQDR 332 (368) Q Consensus 255 ~l~~~g~~~g~~~~pl~~~-~~d~qf~e~~~~~~~~Ia~~fgVPp~~l-g~~~~~~~~~sn~e~~~~~f~~~tl~P~~~~ 332 (368) ++...+ |..-+++.|.+. .-+.--+.+|+-.+..||...-|||..| |+. +.+-|. .=|....-++..|.|.+.. T Consensus 309 ia~~p~-E~l~~ikhl~f~~ei~e~aiktR~daI~RlA~glDi~pE~LLGl~-d~NHWs--AWqI~dedvrlHI~P~l~~ 384 (639) T protein:vir:10 309 VASVAA-EHLEKVQHIKFGNEVTEVEIKTRIDAITRLAMGLDVSPERLLGMS-KGNHWS--AWAIGDEDVQLHIKPVMDL 384 (639) T ss_pred eEeech-HHhcCeeeeeecCchhHHHHhhHHHHHHHHHhccCCchhheeecc-cccceE--EEEecccceeeecchhHHH Confidence 554444 333456666654 4455678999999999999999999875 773 332332 1233333456668888877 Q ss_pred HHH-HHhh-c-------C---c-ceEeechhhhhcC-Chhhhh-hhhhhcC Q lcl|Aclame:pro 333 LLA-INDW-I-------G---D-EVVRFAPYALGGH-DQPAAA-PGGQRSA 368 (368) Q Consensus 333 ie~-l~~~-l-------~---~-~~~~F~~~~Llr~-D~~~ra-~~~~~~~ 368 (368) |.+ |.+. | | . +.+-||.+.|..- |....| +..+|.| T Consensus 385 icdAlT~~~Lrp~Le~eGvDp~kYvvW~DaS~Lt~dPd~~deA~qa~drGA 435 (639) T protein:vir:10 385 ICQAIYNDILTPLLAREGIDPTKYILWYDASGLTSDPDLSDEAVEAHDRGA 435 (639) T ss_pred HHHHHHhhHHHHHHHHhCCCHHHhEeeecCcccccCCCCcHHHHHHHHcCC Confidence 753 4332 2 1 1 2477998888543 333332 2455555 No 149 >protein:vir:97900 Length: 639 # NCBI annotation: gp8 # Family: family:all:2798 # MgeID: mge:1482 # MgeName: Orion # Cross-refs: genbank:acc:YP_655104;genbank:gi:109391854;genbank:GeneID:4157263 Probab=96.62 E-value=0.00011 Score=42.34 Aligned_cols=352 Identities=11% Similarity=0.038 Sum_probs=174.2 Q ss_pred CCcCCCCccccccccccccccCCCcchhhccccCceEEEE---CCCceeccChHHHHH---HHHH---------Hhccch Q lcl|Aclame:pro 1 MSRNKTRRAARAASAHVRTANTDAPTEHHTDRAAQAEVFS---FGDPVEVLDRRELLD---YVEC---------MRMGQW 65 (368) Q Consensus 1 m~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~g~p~~~~~~~~~~~---~~~~---------~~~~~~ 65 (368) |+-.-=+..+|.++.+.-+.+ ..-++++-.......+|. +|.. ...++.+ |+.. |+.+++ T Consensus 1 ma~~~lr~~rrpk~~p~~~rr-~~ltaAsq~~~~p~~~~kt~~~~~a----r~~WQ~eAW~~~d~v~Elry~vgW~~~s~ 75 (639) T protein:vir:97 1 MAATSLRVVRRPKGSAPAARR-RSLTAASQLITDPQKQMKTSLMGTA----RNEWQSEAWDFSESIGELSYYVSWRANSC 75 (639) T ss_pred CCccceeeeecCCCCCcchhh-HHHhhhhhccCCcccchhhhccccc----hhhhhhhhhhhhhhhhhHHHHhhhhhhhh Confidence 765544444444333311111 000000000011112221 2210 0111111 1111 221222 Q ss_pred hcccccHHHHHHHHHhccccc-----chhhhccc--hH---HhhccCCCCcCHHHHHHHHHhHhhhCCeeEEEE-ecCCc Q lcl|Aclame:pro 66 YEPPMPWDGLARSFRAAAHHS-----SAVYVKRN--IL---VSTFIPHPLLSRATFERLVLDWQVFGNAYLERR-ENVLG 134 (368) Q Consensus 66 ~~~p~~~~~l~~~~r~~~~~~-----~~~~~~~~--~~---l~~~~~n~~~~~~~~~~~~~~~ll~Gnay~~i~-r~~~G 134 (368) +..-+- ..+.+.+.+ ..++.+.. .. ....-..+.-..+.++.++.++-+-|.+|+.++ |.+++ T Consensus 76 sr~rL~------as~idpDtg~PtG~V~~E~d~~~~~v~~~v~~iagG~lGqa~llkr~~~~ltV~GE~wi~~l~r~~k~ 149 (639) T protein:vir:97 76 SRTTLI------PSAIDPDTGLPTGEVDIEEDPDAQTVADYVKGIADGPLGQAALIKRAVECMTVVGEVWIAVLIRQEKD 149 (639) T ss_pred ceeeeE------eeeeccccCCCCCccccccccCcchHHHHHHhhcCccchHHHHHHHHHhheecccceEEEEEEecCcc Confidence 221111 112222222 11122211 11 122334556667889999999999999998754 44433 Q ss_pred c------eEEEEEe-cccccccccCCCeeEEEeCCceEEEEcCcc--EEEecCCCCcCCccccchhhHHHHHHHHHHHHH Q lcl|Aclame:pro 135 G------TIRLDTP-LAKYVRRGLDLNTYFFVQNWQQPYTFAAGS--VFHLQEPDINQEVYGLPEYLSALNATWLNESAT 205 (368) Q Consensus 135 ~------~~~L~~l-~p~~v~~~~~~~~~~~~~~~~~~~~~~~~d--viH~r~~~~~~~~~G~spi~~a~~~i~~~~~a~ 205 (368) - +.+-|.+ ....|.. +.+++.-....+|...+|..+- ++.+=.++|..-.+--||+.++...+.-..... T Consensus 150 ~~~~~~~~~~~W~vvs~~Ei~~-~~~~~~~i~lPdG~~he~~~~~d~l~RvW~P~prr~~e~dSpvra~l~~l~Ei~~~t 228 (639) T protein:vir:97 150 PVTGLAAPRARWYAVTREEIKS-KAGETAEISLPDGKTHEFNRDLDSLVRIWNPRPRKASQATSPVRACLETLREIERTT 228 (639) T ss_pred ccCcccccccceeeeeHHHhcc-cCCCeeEeecCCCCCccccCCCceEEEEeCCCcccccCCcchhHHHHHHHHHHHHhh Confidence 2 3333433 3344442 2233333444466666665443 333335677777889999999999888877777 Q ss_pred HHHHHHHhccCCCceeEEeCCCCc------------------------cHHHHHHHHHHHHH----h---cccccccccc Q lcl|Aclame:pro 206 LFRRRYYKNGSHAGFILYMTDAAQ------------------------KQEDVDTLREAMKS----A---KGPGNFRNLF 254 (368) Q Consensus 206 ~~~~~~f~ng~~p~gil~~~~~~l------------------------~~e~~~~~k~~~~~----~---~g~~n~~~~~ 254 (368) +...+--+.-.+-.|||.+|.... ...+.+.|.+.|-+ . .+..-+-.++ T Consensus 229 ~~i~aaakSRl~gnGvlfvP~els~p~~~~p~~~~~~~~pg~~v~~~~~~~a~d~l~~~l~qaa~tai~De~S~aA~vPi 308 (639) T protein:vir:97 229 RKIKNAAKSRVMNNGVLFVPAEMSLPAAQAPIPAGQAQIPGAPVPEVSGVPASEQLATMIYQASVAAMEDENSQAAYIPL 308 (639) T ss_pred hHHHHHHHHHHhhCceeeeccccCCCCccccccccccccCcccccccCCccchHHHHHHHHHHHHhhhcCCCCccceeee Confidence 777666666666677766553210 00123344444422 1 1233344455 Q ss_pred ccccCccccccccccccch-hhHHHHHHHHHHHHHHHHHHhCCChHHh-cccccccccccCHHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 255 MYAPNGKKDGIQLLPVSEV-AAKDEFWNIKNVTRDDQLAAHRVPPQLM-GIIPNNTGGFGDVEKAAMVFARNEVKPLQDR 332 (368) Q Consensus 255 ~l~~~g~~~g~~~~pl~~~-~~d~qf~e~~~~~~~~Ia~~fgVPp~~l-g~~~~~~~~~sn~e~~~~~f~~~tl~P~~~~ 332 (368) ++...+ |..-+++.|.+. .-+.--+.+|+-.+..||...-|||..| |+. +.+-|. .=|....-++..|.|.+.. T Consensus 309 ia~~p~-E~l~~ikhl~f~~ei~e~aiktR~daI~RlA~glDi~pE~LLGl~-d~NHWs--AWqI~dedvrlHI~P~l~~ 384 (639) T protein:vir:97 309 VASVAA-EHLEKVQHIKFGNEVTEVEIKTRIDAITRLAMGLDVSPERLLGMS-KGNHWS--AWAIGDEDVQLHIKPVMDL 384 (639) T ss_pred eEeech-HHhcCeeeeeecCchhHHHHhhHHHHHHHHHhccCCchhheeecc-cccceE--EEEecccceeeecchhHHH Confidence 554444 333456666654 4455678999999999999999999875 773 332332 1233333456668888877 Q ss_pred HHH-HHhh-c-------C---c-ceEeechhhhhcC-Chhhhh-hhhhhcC Q lcl|Aclame:pro 333 LLA-INDW-I-------G---D-EVVRFAPYALGGH-DQPAAA-PGGQRSA 368 (368) Q Consensus 333 ie~-l~~~-l-------~---~-~~~~F~~~~Llr~-D~~~ra-~~~~~~~ 368 (368) |.+ |.+. | | . +.+-||.+.|..- |....| +..+|.| T Consensus 385 icdAlT~~~Lrp~Le~eGvDp~kYvvW~DaS~Lt~dPd~~deA~qa~drGA 435 (639) T protein:vir:97 385 ICQAIYNDILTPLLAREGIDPTKYILWYDASGLTSDPDLSDEAVEAHDRGA 435 (639) T ss_pred HHHHHHhhHHHHHHHHhCCCHHHhEeeecCcccccCCCCcHHHHHHHHcCC Confidence 753 4332 2 1 1 2477998888543 333332 2455555 No 150 >protein:vir:94742 Length: 409 # NCBI annotation: putative portal protein # Family: family:all:524 # MgeID: mge:1529 # MgeName: phi LC3 # Cross-refs: genbank:acc:NP_996701;genbank:gi:45597416;genbank:GeneID:2767966 Probab=96.49 E-value=0.00058 Score=38.33 Aligned_cols=302 Identities=10% Similarity=0.078 Sum_probs=117.5 Q ss_pred cChHHHHHHHHH-------------Hhccchhc--ccccH-HHHHHHHHhc-ccccchhhh-------c---cchHHhhc Q lcl|Aclame:pro 48 LDRRELLDYVEC-------------MRMGQWYE--PPMPW-DGLARSFRAA-AHHSSAVYV-------K---RNILVSTF 100 (368) Q Consensus 48 ~~~~~~~~~~~~-------------~~~~~~~~--~p~~~-~~l~~~~r~~-~~~~~~~~~-------~---~~~~l~~~ 100 (368) ++...+-..... ++.|.... .++.. ..+....+.- ++-..++.. + .+..-++. T Consensus 1 ~~~~~i~~L~~~~~~~~~r~~~~~~yY~g~~~~~~~~~~~p~~~~~~~~~v~nw~~~iVds~a~rl~~~Gf~~~d~~l~~ 80 (409) T protein:vir:94 1 MTEKGIGYLRFKLSVHKRRAEMRYDQYAMKYVDRFKGITIPQALSQQYRSILGWCAKGVDSLADRLVFREFENDDFTVNE 80 (409) T ss_pred CCHHHHHHHHHHHHHHhHHHHHHHHHhcccCchhhcChhhhHHHHHHHhhhcchhHHHHHHhHhhcccCcccCCchHHHH Confidence 333222111111 11121100 00000 0111111110 000000000 0 00000000 Q ss_pred cCCCCcCHHHHHHHHHhHhhhCCeeEEEEecCCcceEEEEEecccccccccCCCe------eEEEe--CCceE---EEEc Q lcl|Aclame:pro 101 IPHPLLSRATFERLVLDWQVFGNAYLERRENVLGGTIRLDTPLAKYVRRGLDLNT------YFFVQ--NWQQP---YTFA 169 (368) Q Consensus 101 ~~n~~~~~~~~~~~~~~~ll~Gnay~~i~r~~~G~~~~L~~l~p~~v~~~~~~~~------~~~~~--~~~~~---~~~~ 169 (368) ....|.--.....+..+.+.+|.+|+.+..+.+|+| .+.+++|..+....+... |.+.. .++.. ..+. T Consensus 81 i~~~N~ld~~~~~~~~~aliyG~sf~~v~~~~dg~~-~i~~~sp~~~~~i~D~~~~~~~~a~~~~~~d~~~~~~~~~~~~ 159 (409) T protein:vir:94 81 IFEENNPDIFFDSAVLSSLIASCSFTYISKGENDAV-RLQVIEAVNATGIIDPITGLLTEGYAVLERDENNNVVLEAHFL 159 (409) T ss_pred HHHhcChhHHHHHHHHHHHHhcceeEEEecCCCCce-EEEEeccceEEEEEecCCCceeeeEEEEEecCCCceEEEEEEe Confidence 000111112334556788899999999999888876 677888877765443211 11110 01100 1111 Q ss_pred Cc----------------------cEEEecCCCCcCCccccchh----hHHHHHHHHHHHHHHHHHHHHhccCCCceeEE Q lcl|Aclame:pro 170 AG----------------------SVFHLQEPDINQEVYGLPEY----LSALNATWLNESATLFRRRYYKNGSHAGFILY 223 (368) Q Consensus 170 ~~----------------------dviH~r~~~~~~~~~G~spi----~~a~~~i~~~~~a~~~~~~~f~ng~~p~gil~ 223 (368) ++ .|+||.+..-.+..+|.|.| ..+.+.+.-...-......||. .|--++. T Consensus 160 ~~~~~~~~~~~~~~~~~~n~~g~vPvV~f~n~~~~~~~~G~s~I~e~v~~l~da~~r~~~~~~~~~e~~a---~pqr~i~ 236 (409) T protein:vir:94 160 PDRTDYYYRDSRNNISIANPTGHPLLVPIIHRPDAVRPFGRSRITRSGMYWQSNAKRTLERADVTAEFYS---FPQKYVT 236 (409) T ss_pred cCcEEEEEecCceeEeeeCCCCCcceEEeccccccccccCccccchhHHHHHHHHHHHHHHHHHHHHHhc---ChhheeE Confidence 11 25666543223567888855 3444444444433334445555 4544443 Q ss_pred eCCCCccHHHHHHHHHHHHHhccccccccccccccCccccccccccccchhhHHHHHHHHHHHHHHHHHHhCCChHHhcc Q lcl|Aclame:pro 224 MTDAAQKQEDVDTLREAMKSAKGPGNFRNLFMYAPNGKKDGIQLLPVSEVAAKDEFWNIKNVTRDDQLAAHRVPPQLMGI 303 (368) Q Consensus 224 ~~~~~l~~e~~~~~k~~~~~~~g~~n~~~~~~l~~~g~~~g~~~~pl~~~~~d~qf~e~~~~~~~~Ia~~fgVPp~~lg~ 303 (368) +...+.+..+. |+... ++++.+..+....+.++..+....- ..|++..+..+.+++..-++|++.+|. T Consensus 237 --G~d~d~~~~~~----~~~~~-----~~i~~~~~d~dg~~~~v~q~~~~~l-~~~~~~l~~~~~~~a~~t~lP~~~lg~ 304 (409) T protein:vir:94 237 --GLSDDAEPMET----WKATV-----SSMLQFTKDEDGDKPTLGQFTQPSM-SPFTEQLRTAAAGFAGETGLTLDDLGF 304 (409) T ss_pred --ecCCCCcccch----hhhhH-----HHhhcCCCCCCCCCceEEecCCCCh-hHHHHHHHHHHHHHhhhcCCCHHHhcc Confidence 11111122222 33221 1222222111113345544433221 249999999999999999999999997 Q ss_pred cccccccccCHHHHHHHHHHHHHHHHHH----HHHHHHhh-------cC---cc----eEeechhhhhcCChh---hhhh Q lcl|Aclame:pro 304 IPNNTGGFGDVEKAAMVFARNEVKPLQD----RLLAINDW-------IG---DE----VVRFAPYALGGHDQP---AAAP 362 (368) Q Consensus 304 ~~~~~~~~sn~e~~~~~f~~~tl~P~~~----~ie~l~~~-------l~---~~----~~~F~~~~Llr~D~~---~ra~ 362 (368) ...+.++...+..+.......+ .-..+ .++++.+. .. .+ .++|. .+.-.|.. +.|+ T Consensus 305 ~~~NpsSa~Al~a~~~~L~~~a-~~k~~~fg~~~~~~~rla~~i~~~~~~~~~~~~~~~v~W~--p~~~~~~~~~a~~aD 381 (409) T protein:vir:94 305 VSDNPSSVEAIKASHENLRLAG-RKAQRSLGAGLLNVAYLAACLRDDAPYLREQFRKTKPKWE--PLFEADASMLSLIGD 381 (409) T ss_pred ccCchhHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhCCCCccccccccceEEec--cCCCcchHHHHHHHH Confidence 5432222212222211111110 00011 11222111 01 11 12343 22223332 2334 Q ss_pred hhhhcC Q lcl|Aclame:pro 363 GGQRSA 368 (368) Q Consensus 363 ~~~~~~ 368 (368) ...|-+ T Consensus 382 a~~Kl~ 387 (409) T protein:vir:94 382 GAIKLN 387 (409) T ss_pred HHHHHH Confidence 444433 No 151 >protein:vir:3609 Length: 452 # NCBI annotation: ORF32 # Family: family:all:125 # MgeID: mge:74 # MgeName: TP901-1 # Cross-refs: genbank:acc:NP_112695;genbank:gi:13786563;genbank:GeneID:921063 Probab=96.11 E-value=0.00099 Score=37.05 Aligned_cols=308 Identities=10% Similarity=0.038 Sum_probs=120.0 Q ss_pred CCcCCCCccc-------cccccccccccCCCcchhhccccCceEEEECCCceeccChHHHHHHHHHHhccchhcccccHH Q lcl|Aclame:pro 1 MSRNKTRRAA-------RAASAHVRTANTDAPTEHHTDRAAQAEVFSFGDPVEVLDRRELLDYVECMRMGQWYEPPMPWD 73 (368) Q Consensus 1 m~~~k~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 73 (368) +++.+.+..+ +..+......+.... ..+ ... +.++-|-.+.+. .+ +-....|+.+. T Consensus 26 i~~~~~~~~r~~~~~~Yy~g~~~i~~~~~~~~-----~~~-~~k-i~~n~~~~ivd~-----~~-----~~l~g~~~~~~ 88 (452) T protein:vir:36 26 MEKHKLEVARYEYLKNMYLGIMAIDDEPAKDS-----WKP-DNR-LAVNFTKYIVDT-----FT-----GYFNGIPVKKS 88 (452) T ss_pred HHHHHHHHHHHHHHHHHhccccccccCccccc-----cCc-cce-eecchHHHHHHH-----Hh-----hhhcccCceee Confidence 1111111100 000000000000000 000 000 001111111000 00 11111222211 Q ss_pred HHHHHHHhcccccchhhhccchHHhhccCCCCcCHHHHHHHHHhHhhhCCeeEEEEecCCcceEEEEEecccccccccCC Q lcl|Aclame:pro 74 GLARSFRAAAHHSSAVYVKRNILVSTFIPHPLLSRATFERLVLDWQVFGNAYLERRENVLGGTIRLDTPLAKYVRRGLDL 153 (368) Q Consensus 74 ~l~~~~r~~~~~~~~~~~~~~~~l~~~~~n~~~~~~~~~~~~~~~ll~Gnay~~i~r~~~G~~~~L~~l~p~~v~~~~~~ 153 (368) . .. .+....+..+. +-+.-......+..+.+.+|.+|..+..+.+|++ .+..++|..+.+..+. T Consensus 89 ~---------~d-----~~~~~~l~~~~-~~n~~~~~~~~~~~~~~~~G~~~~~v~~d~~g~~-~i~~~~p~~~~~v~d~ 152 (452) T protein:vir:36 89 H---------SD-----KEILTKLQEFD-NLNDMEDEESELAKMACIYGRAFEFLYQDEDTQT-NVVYNSPENMFMVYDD 152 (452) T ss_pred c---------CC-----hhHHHHHHHHH-hhcChhHHHHHHHHHHHhcCeEEEEEEecCCCee-EEEEEcccceEEEEcC Confidence 0 00 00011111111 1111223456677889999999999999888875 4666677666543322 Q ss_pred C----e----eEEEeCCce--EEEEcCcc-------------------------EEEecCCCCcCCccccchhhHHHHHH Q lcl|Aclame:pro 154 N----T----YFFVQNWQQ--PYTFAAGS-------------------------VFHLQEPDINQEVYGLPEYLSALNAT 198 (368) Q Consensus 154 ~----~----~~~~~~~~~--~~~~~~~d-------------------------viH~r~~~~~~~~~G~spi~~a~~~i 198 (368) . . .|+...++. ...+.++. |+++++ .-.|.|.+......+ T Consensus 153 ~~~~~~~~~i~~~~~~~~~~~~~vyt~~~i~~~~~~~~~~~~~~~~~~~~g~iPvv~~~n-----~~~g~sd~e~v~~li 227 (452) T protein:vir:36 153 TVKQEPLFAVRYGVDEDKKLQGEVYTLLETIKISGENDEISFGEGTYNPYPDLPVVEFYF-----NEERMSIFESVISLV 227 (452) T ss_pred CCCCceEEEEEEEEecCceEEEEEEecCeEEEEEEcCCceEEecceeccCCcccEEEecC-----CCCCCcchHHHHHHH Confidence 1 0 011111111 11122222 333322 124666665444444 Q ss_pred HHHHHHHHHHHHHHhccCCCceeEEeCCCCccHHHHHHHHHHHHHhccccccccccccccCccccccccccccchhhHHH Q lcl|Aclame:pro 199 WLNESATLFRRRYYKNGSHAGFILYMTDAAQKQEDVDTLREAMKSAKGPGNFRNLFMYAPNGKKDGIQLLPVSEVAAKDE 278 (368) Q Consensus 199 ~~~~~a~~~~~~~f~ng~~p~gil~~~~~~l~~e~~~~~k~~~~~~~g~~n~~~~~~l~~~g~~~g~~~~pl~~~~~d~q 278 (368) .....+..-..+.+...+.|-.+++ +..++++....++. .+.+.+..+|...+.+++-++....+.. T Consensus 228 Da~d~~~s~~~~~~~~~~~p~~~~~--g~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 294 (452) T protein:vir:36 228 NAFNKAISEKANDVDYFSDQYLTFL--GAAVEEEDLKNIRS-----------NRVINYYADGEGKNVDVKFLEKPDSDSQ 294 (452) T ss_pred HHHHHHHHHHHHHHHHhcCceeEee--cCCcCchhhhhhhh-----------cceEEecCCCCccCCcceeEeecCCHHH Confidence 4443333334444444556655553 44455544333221 1233344434333444444444444566 Q ss_pred HHHHHHHHHHHHHHHhCCChHHhcccccccccccCHHHHHHHH---------------HHHHHHHHHHHHHHHHhhcCcc Q lcl|Aclame:pro 279 FWNIKNVTRDDQLAAHRVPPQLMGIIPNNTGGFGDVEKAAMVF---------------ARNEVKPLQDRLLAINDWIGDE 343 (368) Q Consensus 279 f~e~~~~~~~~Ia~~fgVPp~~lg~~~~~~~~~sn~e~~~~~f---------------~~~tl~P~~~~ie~l~~~l~~~ 343 (368) +.+..+...+.|...-++|..-.+.. +|.......+ +...|...++.+..+....+.. T Consensus 295 ~~~~~~~l~~~I~~~s~~p~~~~~~~-------gn~Sg~Al~~~~~~l~~k~~~~~~~~~~~l~~~~~li~~~~~~~~~~ 367 (452) T protein:vir:36 295 TENLLDRLTKLIFQTTMVANISDESF-------GSSSGVSLAYKLQAMSNLALSFQRKFQSSLNSRYKLFCELSTNVSNK 367 (452) T ss_pred HHHHHHHHHHHHHHHhCccccCcccc-------cCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCc Confidence 77778888899999999995332211 1221111212 2222333222222222111111 Q ss_pred ------eEeechhhhhcCChhhhhhhhhhcC Q lcl|Aclame:pro 344 ------VVRFAPYALGGHDQPAAAPGGQRSA 368 (368) Q Consensus 344 ------~~~F~~~~Llr~D~~~ra~~~~~~~ 368 (368) -+.|+. -+--|....|+...+++ T Consensus 368 ~~~~~i~i~f~~--~~p~d~~~~a~~~~k~~ 396 (452) T protein:vir:36 368 DSWKDIEYTFTR--NEPKDIKEQAETANILM 396 (452) T ss_pred cccccceEEeCC--CCCcCHHHHHHHHHHHh Confidence 145543 33456666777666666 No 152 >protein:vir:98444 Length: 434 # NCBI annotation: hypothetical protein # Family: family:all:5096 # MgeID: mge:1589 # MgeName: VWB # Cross-refs: genbank:acc:NP_958276;genbank:gi:41057250;genbank:GeneID:2732828 Probab=95.65 E-value=0.0017 Score=35.79 Aligned_cols=299 Identities=9% Similarity=-0.051 Sum_probs=116.2 Q ss_pred ccChHHHHHHHHHHhccchhcccccHHHHHHHHHhc-ccccchhhhccchHHh-hccCCCCcCHHHHHHHHHhHhhhCCe Q lcl|Aclame:pro 47 VLDRRELLDYVECMRMGQWYEPPMPWDGLARSFRAA-AHHSSAVYVKRNILVS-TFIPHPLLSRATFERLVLDWQVFGNA 124 (368) Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~r~~-~~~~~~~~~~~~~~l~-~~~~n~~~~~~~~~~~~~~~ll~Gna 124 (368) .|+..+--.+-...+. .+. ......++.+.... ..+=.+...+.+..+. .+..|. -......+..+.+.+|.+ T Consensus 1 ~l~~~~~~~~~~~~~~-~v~--n~~~~ivd~~~~~l~~~gf~~~d~~~~~~~~~i~~~N~--~d~~~~~~~~~a~i~G~a 75 (434) T protein:vir:98 1 MLPKNAEQAFLDFQRK-ART--NFCGLIANASVHRLLALGVTGPDGEPDTRASRWWQANR--LDSRQKLVWRMAMAQSAG 75 (434) T ss_pred CCCCCccHHHHHhhhh-hhc--cchHHHHHHHHhhhccCceecCCCchHHHHHHHHHhcC--hhHHHHHHHHHHhhcCce Confidence 1111110000000000 000 00011111111100 0000000001111111 111121 123455677888999999 Q ss_pred eEEEEecCCcc-----e-EEEEEecccccccccCCCe--------eEEEeCCceE--E---------------------- Q lcl|Aclame:pro 125 YLERRENVLGG-----T-IRLDTPLAKYVRRGLDLNT--------YFFVQNWQQP--Y---------------------- 166 (368) Q Consensus 125 y~~i~r~~~G~-----~-~~L~~l~p~~v~~~~~~~~--------~~~~~~~~~~--~---------------------- 166 (368) |..+.++..+. + ..+.+++|.++.+..+... ||....++.. . T Consensus 76 y~~v~~~~~~~~~~~~~~~~I~~~~p~~~~~i~D~~~~~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (434) T protein:vir:98 76 YMLVGAHPTRTEDNGRPSPLITMEHPSECIVEYDPETGEPLVGLKVWHNDIDGFGYARVFFDDTSFPYRTRERTGARLPW 155 (434) T ss_pred EEEEecCCCcccccCCceeEEEEeccceeEEEEeCCCCceEEEEEEEEeccCCceEEEEEEeCcEEEEEEeecccccccc Confidence 99998765442 2 2366778877654443210 1111111100 0 Q ss_pred -----------------EEcCccEEEecCCCCcCCccccchhhHHHHHHHHHHHHHHHHHHHHhccCCCceeEEeCCCCc Q lcl|Aclame:pro 167 -----------------TFAAGSVFHLQEPDINQEVYGLPEYLSALNATWLNESATLFRRRYYKNGSHAGFILYMTDAAQ 229 (368) Q Consensus 167 -----------------~~~~~dviH~r~~~~~~~~~G~spi~~a~~~i~~~~~a~~~~~~~f~ng~~p~gil~~~~~~l 229 (368) .|..=.|+||++..-.++ .|+|-++.....+.....+..-.....+-.+.|--+|. +..+ T Consensus 156 ~~~~~~~~~~~~~~~~h~~g~vPvv~f~N~~~~~~-~g~sd~e~vi~liDa~~~~~s~~~~~~~~~a~p~~~i~--G~~~ 232 (434) T protein:vir:98 156 GPDSWVYTGTADSGDVHDLGGMQLVEFARMPDLGE-DPEPEFAGVLDIQDRVNLGILNRMAASRFSGFRQKWIK--GHKF 232 (434) T ss_pred ccccceecccccccccCCCCccceEEeccCCCcCc-CCcchhhhHHHHHHHHHHHHHHHHHHHHHhcchhhhhc--CCCc Confidence 000012566664322223 58888877666666665555544444444455654543 2212 Q ss_pred cHHHH--HHHHHHHHHhccccccccccccccCccccccccccccchhhHHHHHHHHHHHHHHHHHHhCCChHHhcccccc Q lcl|Aclame:pro 230 KQEDV--DTLREAMKSAKGPGNFRNLFMYAPNGKKDGIQLLPVSEVAAKDEFWNIKNVTRDDQLAAHRVPPQLMGIIPNN 307 (368) Q Consensus 230 ~~e~~--~~~k~~~~~~~g~~n~~~~~~l~~~g~~~g~~~~pl~~~~~d~qf~e~~~~~~~~Ia~~fgVPp~~lg~~~~~ 307 (368) .+..- ......++..... .+..+++ ++ .+.++..+....- ..|++..+..+.+|+..=++|++.+|.... T Consensus 233 ~~~~~~~~~~~~~~~~~~~~--~~~i~~~-~~---~~~~~~q~~~~~~-~~~~~~l~~~i~~~~~~~~~p~~~~~~~~~- 304 (434) T protein:vir:98 233 AKRTDPATGMTVVDQPFVPS--PSAVWAS-EG---ENTQFGQLDATDL-SGFLKEHASDVRDMLTISQTPTYLYATDLV- 304 (434) T ss_pred ccccccccccchhhhhhhcc--ccccccC-CC---CCceEEEecCcch-HHHHHHHHHHHHHHhcccCCCHHHhccccC- Confidence 21110 0111112211111 1222222 21 2355555443322 238888889999999999999999984221 Q ss_pred cccccCHHHHHHHHHHHHHHHHHHHHHH-----HH---hh----cCc--c----eEeechhhhhcCChhhhhhhhhhcC Q lcl|Aclame:pro 308 TGGFGDVEKAAMVFARNEVKPLQDRLLA-----IN---DW----IGD--E----VVRFAPYALGGHDQPAAAPGGQRSA 368 (368) Q Consensus 308 ~~~~sn~e~~~~~f~~~tl~P~~~~ie~-----l~---~~----l~~--~----~~~F~~~~Llr~D~~~ra~~~~~~~ 368 (368) |.......|....|.-.+.+.+. +. +. .+. + .+.|... +--+..+.|+...+.. T Consensus 305 -----n~Sg~Al~~~~~~l~~k~~~k~~~f~~~l~~~~rl~~~~~g~~~~~~~~~v~w~~~--~~~s~~~~ada~~kl~ 376 (434) T protein:vir:98 305 -----NISADTIGALDILHVAKVREHIASFSEGLESVLALAAAQAGVPEDYTEAEVRWANP--AHVTMAVKADAATKLK 376 (434) T ss_pred -----ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhheeeeEEecCC--CCCCHHHHHHHHHHHH Confidence 22222222333322222222211 11 11 111 1 1334321 1223333344333332 No 153 >protein:vir:99522 Length: 470 # NCBI annotation: putative protein # Family: family:all:125 # MgeID: mge:1559 # MgeName: Lj928 # Cross-refs: genbank:acc:NP_958533;genbank:gi:41179315;genbank:GeneID:2717160 Probab=95.48 E-value=0.002 Score=35.40 Aligned_cols=322 Identities=11% Similarity=-0.038 Sum_probs=121.3 Q ss_pred CCcCCCCc-------cccccccccccccCCCcchhhccccCceEEEECCCceeccChHHHHHHHHHHhccchhcccccHH Q lcl|Aclame:pro 1 MSRNKTRR-------AARAASAHVRTANTDAPTEHHTDRAAQAEVFSFGDPVEVLDRRELLDYVECMRMGQWYEPPMPWD 73 (368) Q Consensus 1 m~~~k~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 73 (368) .++-+.+. .++-...| ++.........+... +..+-+- .+.+. ..+-....|+.+. T Consensus 34 i~~~~~~~~~~~~~l~~Yy~g~~------~i~~~~~~~~~~~~k-i~~n~~~------~Ivd~----~~~~l~g~p~~~~ 96 (470) T protein:vir:99 34 IAYNETVLKPRYRENMKLYLGKH------KILTAPEKETGADNR-IVVNSAK------YVVDV----YNGYFCGIEPKLA 96 (470) T ss_pred HHHHHHhhHHHHHHHHHHhcccc------ccccCcccccCCcce-eecchHH------HHHHH----HhhhhccCCeeEe Confidence 11000000 00000000 000000000000000 0000000 01000 0011122232211 Q ss_pred HHHHHHHhcccccchhhhccchHHh-hccCCCCcCHHHHHHHHHhHhhhCCeeEEEEecCCcceEEEEEecccccccccC Q lcl|Aclame:pro 74 GLARSFRAAAHHSSAVYVKRNILVS-TFIPHPLLSRATFERLVLDWQVFGNAYLERRENVLGGTIRLDTPLAKYVRRGLD 152 (368) Q Consensus 74 ~l~~~~r~~~~~~~~~~~~~~~~l~-~~~~n~~~~~~~~~~~~~~~ll~Gnay~~i~r~~~G~~~~L~~l~p~~v~~~~~ 152 (368) +- ... +....+. ....| .-......++.+.+.+|.+|..+..+.+|++ .+..++|..+.+..+ T Consensus 97 ~~--------~d~-----~~~~~l~~~~~~n--~~~~~~~~~~~~~~~~G~~~~~v~~d~dg~~-~i~~~~p~~~~~i~d 160 (470) T protein:vir:99 97 LL--------NDS-----SKIDEIARWNRQE--NFFDTINEISKQCDIFGRSIASIYQGEDARP-HLMYSSPNHAFIIYD 160 (470) T ss_pred eC--------Cch-----hHHHHHHHHHHhc--CHhHHHHHHHHHHHhcCeeEEEEEeCCCCeE-EEEEEccceeEEEEc Confidence 00 000 0000111 11111 1224556788899999999999999888875 567778877755443 Q ss_pred CCe---------eEEEeCCceE----EEEcCccEEEecCC----------------------CCcCCccccchhhHHHHH Q lcl|Aclame:pro 153 LNT---------YFFVQNWQQP----YTFAAGSVFHLQEP----------------------DINQEVYGLPEYLSALNA 197 (368) Q Consensus 153 ~~~---------~~~~~~~~~~----~~~~~~dviH~r~~----------------------~~~~~~~G~spi~~a~~~ 197 (368) ... ||....++.. ..+.++.++++... ...+...|.|-+...... T Consensus 161 ~~~~~~~~~~vr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~vPvv~~~n~~~g~sd~e~v~~l 240 (470) T protein:vir:99 161 DTVQRQPLAFVHYQIDNSNNWTDAYGVIQYADKFYKFKGYDIEEDTNAAGYAINPYGLVPAVEFFENEERQGIFDSIKTL 240 (470) T ss_pred CCCCcceEEEEEEEEEecCCeeEEEEEEEecCeEEEEEecccccccccccccccCCCccceEeecCCCCCCcchHhHHHH Confidence 211 1111111110 11222222221100 000123577777766666 Q ss_pred HHHHHHHHHHHHHHHhccCCCceeEEeCCCCccHHHHHHHHHHHHHhccccccccccccccCccccccccccccchhhHH Q lcl|Aclame:pro 198 TWLNESATLFRRRYYKNGSHAGFILYMTDAAQKQEDVDTLREAMKSAKGPGNFRNLFMYAPNGKKDGIQLLPVSEVAAKD 277 (368) Q Consensus 198 i~~~~~a~~~~~~~f~ng~~p~gil~~~~~~l~~e~~~~~k~~~~~~~g~~n~~~~~~l~~~g~~~g~~~~pl~~~~~d~ 277 (368) +.....+..-....+...+.|-.++. +..+.++........+.. .+.+.+...+.+.+-++..++...... T Consensus 241 iDa~~~~~s~~~~~~~~~~~~~~~i~--g~~~~~~~~g~~~~~~~~-------~~~~~~~~~~~~~~~~~~~l~~~~~~~ 311 (470) T protein:vir:99 241 INALDKVISQKANQVEYFDNAYMYMI--GFKLPEDDEGNPKFDFKN-------NRVLYVSQLDPDTNPQIGFIAKPDADQ 311 (470) T ss_pred HHHHHHHHHHHHHHHHHhcCceeeee--cCCcccccccchhhhhhh-------cceeeecCCCCCCCCcceEEeecCChH Confidence 66555555555555566666766664 332332211111111211 112222211112333444455444455 Q ss_pred HHHHHHHHHHHHHHHHhCCChHHhcccccccccccCHHHHHH-------------HHHHHHHHHHHHHHHHHHhhcC-c- Q lcl|Aclame:pro 278 EFWNIKNVTRDDQLAAHRVPPQLMGIIPNNTGGFGDVEKAAM-------------VFARNEVKPLQDRLLAINDWIG-D- 342 (368) Q Consensus 278 qf~e~~~~~~~~Ia~~fgVPp~~lg~~~~~~~~~sn~e~~~~-------------~f~~~tl~P~~~~ie~l~~~l~-~- 342 (368) .+.+..+...+.|+..-++|+...+-..++ . +.+.... ..+...|.-.++.+..+-...+ . T Consensus 312 ~~~~~~~~l~~~i~~~s~~p~~~~~~~~~n-~---Sg~Ai~~~~~~l~~k~~~~~~~~~~~l~~~~~li~~~~~~~~~~~ 387 (470) T protein:vir:99 312 MQENLIQHLTDFIFMMAMVPNIQDKNFAGN-S---SGVALQYKLFAMKNKADSKERKFDKSLMQLYRIVLATLFNNKQDQ 387 (470) T ss_pred HHHHHHHHHHHHHHHHhCCccccccccccC-c---hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcc Confidence 566677888999999999997654322211 1 1111111 1112222222222211110001 0 Q ss_pred ---ceEeechhhhhcCChhhhhhhhhhcC Q lcl|Aclame:pro 343 ---EVVRFAPYALGGHDQPAAAPGGQRSA 368 (368) Q Consensus 343 ---~~~~F~~~~Llr~D~~~ra~~~~~~~ 368 (368) .-+++.+..-+--|....|+...+.+ T Consensus 388 ~~~~~i~v~f~~~~p~~~~e~a~~~~kl~ 416 (470) T protein:vir:99 388 ELWSELDFKFTRNLPEDMASAIDNAKNAE 416 (470) T ss_pred cccccceEEeCCCCCcCHHHHHHHHHHHh Confidence 11222222223345666666666655 No 154 >protein:vir:93747 Length: 472 # NCBI annotation: ORF006 # Family: family:all:125 # MgeID: mge:1475 # MgeName: 55 # Cross-refs: genbank:acc:YP_240454;genbank:gi:66396119;genbank:GeneID:5133516 Probab=94.79 E-value=0.0035 Score=34.06 Aligned_cols=311 Identities=7% Similarity=-0.005 Sum_probs=121.0 Q ss_pred CCcCCCCc---cccccccccccccCCCc--chhhccccCceEEEECCCceeccChHHHHHHHHHHhccchhcccccHHHH Q lcl|Aclame:pro 1 MSRNKTRR---AARAASAHVRTANTDAP--TEHHTDRAAQAEVFSFGDPVEVLDRRELLDYVECMRMGQWYEPPMPWDGL 75 (368) Q Consensus 1 m~~~k~~~---~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l 75 (368) ++.++.+- .++-...|.-....... ............ +..+-|-. +.+-. .+-....|+.+.. T Consensus 36 ~~~~~~~~~~~~~YY~g~~~i~~~~~~~~~~~~~~~~~~~~r-i~~n~~~~------ivd~~----~~~l~g~~~~~~~- 103 (472) T protein:vir:93 36 HLEKLPEISIGQEYYEQRPDIVKEPKPVDATGAVDPLKPDDR-MITNFHAN------LVDQK----VSYIVGKPIAFKH- 103 (472) T ss_pred HHHHHHHHHHHHHHhccccccccccchhhccccccccccccc-cccchHHH------HHHHH----hhhhcccCeeecc- Confidence 11111110 00000000000000000 000000000000 00000000 00100 0111122222110 Q ss_pred HHHHHhcccccchhhhccchHHhhccCCCCcCHHHHHHHHHhHhhhCCeeEEEEecCCcceEEEEEecccccccccCCC- Q lcl|Aclame:pro 76 ARSFRAAAHHSSAVYVKRNILVSTFIPHPLLSRATFERLVLDWQVFGNAYLERRENVLGGTIRLDTPLAKYVRRGLDLN- 154 (368) Q Consensus 76 ~~~~r~~~~~~~~~~~~~~~~l~~~~~n~~~~~~~~~~~~~~~ll~Gnay~~i~r~~~G~~~~L~~l~p~~v~~~~~~~- 154 (368) ... +....+..+..|. .......+..+.+.+|.||..+..+.+|++ .+..++|..+.+..+.. T Consensus 104 --------~d~-----~~~~~l~~~~~n~--~~~~~~~~~~~~~~~G~~~~~v~~d~d~~~-~i~~~~p~~~~~i~d~~~ 167 (472) T protein:vir:93 104 --------TDD-----EVVKRIDEVLGNR--FDDKLHSVLTGASNKGIEWLHPYLDEEGEF-KLFRVPAEQGIPIWTDKE 167 (472) T ss_pred --------CCh-----HHHHHHHHHHhcc--HHHHHHHHHHHHhhcCeEEEEEEECCCCce-EEEEEcccceEEEEcCCC Confidence 000 0011111122221 123444567888999999999999888874 46677777766544321 Q ss_pred ---e-----eEEEeCCceEEEEcCcc-----------------------------------EEEecCCCCcCCccccchh Q lcl|Aclame:pro 155 ---T-----YFFVQNWQQPYTFAAGS-----------------------------------VFHLQEPDINQEVYGLPEY 191 (368) Q Consensus 155 ---~-----~~~~~~~~~~~~~~~~d-----------------------------------viH~r~~~~~~~~~G~spi 191 (368) . +|..........+.+.. |++|++ ...|.|-+ T Consensus 168 ~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vPvv~~~n-----n~~g~s~~ 242 (472) T protein:vir:93 168 HEELEAFIRMYKLENETKVEYWDKVTVNYYVYENGSLIPDYSNNLENSKTHFSTGSWGKIPFIPFKN-----NDLEISDI 242 (472) T ss_pred CCceEEEEEEEEeecceeEEEEecCeEEEEEEecCeeeecccccccccccccccCCCCCcceEEecC-----CCCCCCch Confidence 0 11111111111112211 333332 23577777 Q ss_pred hHHHHHHHHHHHHHHHHHHHHhccCCCceeEEeCCCCccHHHHHHHHHHHHHhccccccccccccccCcccccccccccc Q lcl|Aclame:pro 192 LSALNATWLNESATLFRRRYYKNGSHAGFILYMTDAAQKQEDVDTLREAMKSAKGPGNFRNLFMYAPNGKKDGIQLLPVS 271 (368) Q Consensus 192 ~~a~~~i~~~~~a~~~~~~~f~ng~~p~gil~~~~~~l~~e~~~~~k~~~~~~~g~~n~~~~~~l~~~g~~~g~~~~pl~ 271 (368) ......+.....+..-..+-+...+.|-.+++ +.. .+........+.. .+.+.+..+ .+++| ++ T Consensus 243 e~v~~liDa~~~~~s~~~~~~~~~~~~~~~~~--g~~--~~~~~~~~~~~~~-------~~~~~~~~~---~~~~~--l~ 306 (472) T protein:vir:93 243 FMYKTLIDAYNRRLSDLSNTFKDSNELTYVLT--NYD--DQELPEFKRLLRY-------YGAIKVSDN---GGVDT--IQ 306 (472) T ss_pred hhhHHHHHHHHHHHHHHHHHHHHhcCceeEee--cCC--cccchhhHHHHhh-------ccccccCCC---Cccee--Ee Confidence 76666665555454555555566667766654 321 1211122222211 122222222 33444 33 Q ss_pred chhhHHHHHHHHHHHHHHHHHHhCCChHHhcccccccccccCHHHHHHHHHHHHHHHHHHH--------HHHH----Hhh Q lcl|Aclame:pro 272 EVAAKDEFWNIKNVTRDDQLAAHRVPPQLMGIIPNNTGGFGDVEKAAMVFARNEVKPLQDR--------LLAI----NDW 339 (368) Q Consensus 272 ~~~~d~qf~e~~~~~~~~Ia~~fgVPp~~lg~~~~~~~~~sn~e~~~~~f~~~tl~P~~~~--------ie~l----~~~ 339 (368) ....+..+....+...+.|+..-++|....+...+ |.......+....+.-.+.. |+++ ... T Consensus 307 ~~~~~~~~~~~~~~l~~~i~~~s~~p~~~~~~~~~------n~Sg~Al~~~~~~l~~ka~~~~~~~~~~l~~~~~li~~~ 380 (472) T protein:vir:93 307 VEVPVENSKKYLDELYQKIMLFGQAVDFSSDKFGS------APSGVALEFLYTNLNLKADKLARKAKVAIQELLWFVFEH 380 (472) T ss_pred ecCCHHHHHHHHHHHHHHHHHHhCCCCCCcccccc------CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Confidence 33456777888888899999999999765433221 11222222222222111111 1111 111 Q ss_pred cCc--c--e--EeechhhhhcCChhhhhhhhhhcC Q lcl|Aclame:pro 340 IGD--E--V--VRFAPYALGGHDQPAAAPGGQRSA 368 (368) Q Consensus 340 l~~--~--~--~~F~~~~Llr~D~~~ra~~~~~~~ 368 (368) ++. + - +.|+ .-+--|..+.++...+++ T Consensus 381 ~~~~~~~~~i~v~f~--~~~p~~~~~~~~~~~k~~ 413 (472) T protein:vir:93 381 FDIKGEHKDVDISFN--YNKVANTELQVQTAQQSM 413 (472) T ss_pred hCCCcccceeeEEeC--CCCCCCHHHHHHHHHHHh Confidence 221 1 1 3453 233345666677666666 No 155 >protein:vir:99916 Length: 504 # NCBI annotation: gp3 # Family: family:all:524 # MgeID: mge:1611 # MgeName: Halo # Cross-refs: genbank:acc:YP_655520;genbank:gi:109392290;genbank:GeneID:4157085 Probab=94.52 E-value=0.0042 Score=33.62 Aligned_cols=318 Identities=12% Similarity=0.052 Sum_probs=116.4 Q ss_pred hccccCceEEEECCCceeccChHH---HHHHHHH-------------Hhccchhc--ccccH-HHHHHHHHhcccccchh Q lcl|Aclame:pro 29 HTDRAAQAEVFSFGDPVEVLDRRE---LLDYVEC-------------MRMGQWYE--PPMPW-DGLARSFRAAAHHSSAV 89 (368) Q Consensus 29 ~~~~~~~~~~~~~g~p~~~~~~~~---~~~~~~~-------------~~~~~~~~--~p~~~-~~l~~~~r~~~~~~~~~ 89 (368) .+.-..+.++|++. +.. ++..+ +-..... ++.|.... .+... ..+..+.-...+ .+.+ T Consensus 1 ~~~~~~~~~~~~~~-~~~-l~~~e~~~i~~L~~~~~~~~~r~~~l~~YY~G~~~i~~~~~~~p~~~~~~~~v~n~-~~~i 77 (504) T protein:vir:99 1 MTEETTSASKFTFR-IPE-LNDDVVDKVNGLYQQLVDRTPRNLLRASFYDGKYAIRQIGNLIPPEYLRTATVLGW-SAKA 77 (504) T ss_pred CCccCCcccccccc-cCC-CCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhccccchhccccccHHHHHHhhccCc-HHHH Confidence 12222233444431 111 22211 1111110 11121100 01000 000000000000 0000 Q ss_pred hhc---------------c-chHHhhccCCCCcCHHHHHHHHHhHhhhCCeeEEEEecCCcceE-EEEEecccccccccC Q lcl|Aclame:pro 90 YVK---------------R-NILVSTFIPHPLLSRATFERLVLDWQVFGNAYLERRENVLGGTI-RLDTPLAKYVRRGLD 152 (368) Q Consensus 90 ~~~---------------~-~~~l~~~~~n~~~~~~~~~~~~~~~ll~Gnay~~i~r~~~G~~~-~L~~l~p~~v~~~~~ 152 (368) ... . ....++.....|.-......+..+.+.+|.||+.|..+.+|++. .+.+++|..+....+ T Consensus 78 Vd~~a~rl~~~Gf~~~d~~~~~~~l~~i~~~N~ld~~~~~~~~~a~iyG~af~~v~~~~d~~~~~~I~~~sP~~~~~iyD 157 (504) T protein:vir:99 78 VDTLARRCNLESFVWPDGDYGSIGGPDVWDENFFATKANNAMVSSLIHGPAFLINTEGGAGEPDSLIHVKSAMQATGEWN 157 (504) T ss_pred HHHHHhhhccceeeCCCCChhhHHHHHHHHhcChhhHHHHHHHHHHhhCceeEEEecCCCCCceeEEEEeccceeEEEEe Confidence 000 0 00000000001111123345667889999999999998888864 567888887765443 Q ss_pred CCe--------eEEEeCCceE---EEEcCcc------------------------EEEecCCCCcCCccccchhh----H Q lcl|Aclame:pro 153 LNT--------YFFVQNWQQP---YTFAAGS------------------------VFHLQEPDINQEVYGLPEYL----S 193 (368) Q Consensus 153 ~~~--------~~~~~~~~~~---~~~~~~d------------------------viH~r~~~~~~~~~G~spi~----~ 193 (368) ... ++....+|+. ..+.++. |++|.+..-.+..+|.|.|. . T Consensus 158 ~~~~~~~~a~~~~~~d~~g~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~gvPvV~~~n~~~~~~~~G~sei~~~v~~ 237 (504) T protein:vir:99 158 SRRNAMDSLLSITSRDAEGHPTGIALYEDGVTVTADMDDDGDWHADVRTHKLGVPVEVLPYKPREDRPLGSSRITRPVMS 237 (504) T ss_pred CCCCceeEEEEEEEecCCCeEEEEEEEcCCcEEEEEEcCCceeeeccccCCCCcceEEecccccCccccCcccchhhHHH Confidence 210 1111222221 1122322 45554432224557777543 3 Q ss_pred HHHHHHHHHHHHHHHHHHHhccCCCceeEEeCCCCc---cHHHHHHHHHHHHHhccccccccccccccCcc-----cccc Q lcl|Aclame:pro 194 ALNATWLNESATLFRRRYYKNGSHAGFILYMTDAAQ---KQEDVDTLREAMKSAKGPGNFRNLFMYAPNGK-----KDGI 265 (368) Q Consensus 194 a~~~i~~~~~a~~~~~~~f~ng~~p~gil~~~~~~l---~~e~~~~~k~~~~~~~g~~n~~~~~~l~~~g~-----~~g~ 265 (368) +.+.+.-...-..-...||.+ |--+|. +..+ .+++.+ -...|+...+ +++.+..+.. ..+. T Consensus 238 l~Da~~~~~~~~~~~~e~~a~---p~r~i~--G~~~~~~~~~d~~-~~~~~~~~~~-----~i~~~~~~~~~~~~~~~~~ 306 (504) T protein:vir:99 238 LQQRALKGCIRMDGHADVYSF---PQLILL--GADAKNFRNKDGS-MKPAWQIALA-----RVFALPDDEDEPDAARARA 306 (504) T ss_pred HHHHHHHHHHHHHHHHHHhcc---hhhhhc--cCCcccccccccc-ccchhhhhhh-----hhhcCCCccccccccCccc Confidence 333333222222223344433 332321 1111 111111 1112222211 1121211100 0123 Q ss_pred ccccccchhhHH-HHHHHHHHHHHHHHHHhCCChHHhcccccccccccCHHHHHHHHHHHHHHHHHH----HHH----HH Q lcl|Aclame:pro 266 QLLPVSEVAAKD-EFWNIKNVTRDDQLAAHRVPPQLMGIIPNNTGGFGDVEKAAMVFARNEVKPLQD----RLL----AI 336 (368) Q Consensus 266 ~~~pl~~~~~d~-qf~e~~~~~~~~Ia~~fgVPp~~lg~~~~~~~~~sn~e~~~~~f~~~tl~P~~~----~ie----~l 336 (368) ++..+.. .++ .|++..+..+.+|+..=++|++.+|+... ++-++.+.. .+....|.-.+. .|. ++ T Consensus 307 ~~~q~~~--~~l~~~~~~l~~~i~~~a~~t~~P~~~lG~~~~--~n~sSa~Ai--~~~~~~L~~ka~~k~~~f~~~l~~~ 380 (504) T protein:vir:99 307 DVKQFPA--SSPQPHIEMLEQIAMMFSGETSIPVESLGFSNR--ANPTSADAY--IASREDLIAEAEGATDDWSPAFRRS 380 (504) T ss_pred eeeecCC--CChHHHHHHHHHHHHHHHhhhCCCHHHhccccc--ccccHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHH Confidence 4433332 233 48999999999999999999999997643 121222222 222222222111 111 11 Q ss_pred Hhh---c----C---cce----EeechhhhhcCChhhhhhhhhhcC Q lcl|Aclame:pro 337 NDW---I----G---DEV----VRFAPYALGGHDQPAAAPGGQRSA 368 (368) Q Consensus 337 ~~~---l----~---~~~----~~F~~~~Llr~D~~~ra~~~~~~~ 368 (368) .+. + . .+. +.|.. ..--+.++.|+...+.+ T Consensus 381 ~rla~~~~~~~~~~~~~~~~~~v~w~d--~~~~s~a~~aDa~~Kl~ 424 (504) T protein:vir:99 381 MIRALAIKNGLDRIPPEWKTIDSKFRS--PLYLSKAAQADAGAKML 424 (504) T ss_pred HHHHHHHhcCCCccccccccceeEecC--CCccCHHHHHHHHHHHH Confidence 111 0 0 111 23421 22223344455444432 No 156 >protein:vir:733 Length: 453 # NCBI annotation: minor structural protein 1 # Family: family:all:125 # MgeID: mge:14 # MgeName: Tuc2009 # Cross-refs: genbank:acc:NP_108710;genbank:gi:13487832;genbank:GeneID:920851 Probab=94.39 E-value=0.0046 Score=33.42 Aligned_cols=324 Identities=9% Similarity=-0.022 Sum_probs=119.2 Q ss_pred CCcCCCCccccccccccccccCCCcchhh-ccccCceEEEECCCceeccChHHHHHHHHHHhccchhcccccHHHHHHHH Q lcl|Aclame:pro 1 MSRNKTRRAARAASAHVRTANTDAPTEHH-TDRAAQAEVFSFGDPVEVLDRRELLDYVECMRMGQWYEPPMPWDGLARSF 79 (368) Q Consensus 1 m~~~k~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~ 79 (368) +++...+.++...-..-=........... ......... ..+-|-.+ .+. ..+-....|+.+.. T Consensus 26 i~~~~~~~~r~~~~~~yy~g~~~i~~~~~~~~~~~~~ki-~~n~~~~i------vd~----~~~~l~g~~~~~~~----- 89 (453) T protein:vir:73 26 MKKHQEEVERYEYLGNMYKGIMEISSQKAKDSWKPDNRL-TNNFAKYI------VDT----FVGYFNGIPIKKTH----- 89 (453) T ss_pred HHHHHHHHHHHHHHHHHhccccchhcCCCCCccCcccee-ecchHHHH------HHH----hhhhhcccCceeec----- Confidence 11110000000000000000000000000 000000010 01111100 000 00111112222110 Q ss_pred HhcccccchhhhccchHHhh-ccCCCCcCHHHHHHHHHhHhhhCCeeEEEEecCCcceEEEEEecccccccccCCCe--- Q lcl|Aclame:pro 80 RAAAHHSSAVYVKRNILVST-FIPHPLLSRATFERLVLDWQVFGNAYLERRENVLGGTIRLDTPLAKYVRRGLDLNT--- 155 (368) Q Consensus 80 r~~~~~~~~~~~~~~~~l~~-~~~n~~~~~~~~~~~~~~~ll~Gnay~~i~r~~~G~~~~L~~l~p~~v~~~~~~~~--- 155 (368) .. ......+.. +..| .-......+..+.+.+|.+|..+.++.+|.+ .+..++|..+.+..+... T Consensus 90 ----~d-----~~~~~~l~~~~~~n--~~~~~~~~~~~~~~~~G~~~~~v~~d~~~~~-~i~~~~p~~~~~v~dd~~~~~ 157 (453) T protein:vir:73 90 ----DD-----KSVLEAMQLFDNLN--DMEDEESELAKIACVYGRAYELMYQNESTES-EVIYCSPLNVFMVYDDSIKQK 157 (453) T ss_pred ----CC-----hHHHHHHHHHHHhc--ChhHHHHHHHHHHHhcCeEEEEEEeCCCCce-EEEEEcccceEEEEeCCCCce Confidence 00 000111111 1112 1123455677889999999999999888876 466677776644332210 Q ss_pred -----eEEEeCCce--EEEEcCccEEEecCC-----------CC---------cCCccccchhhHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 156 -----YFFVQNWQQ--PYTFAAGSVFHLQEP-----------DI---------NQEVYGLPEYLSALNATWLNESATLFR 208 (368) Q Consensus 156 -----~~~~~~~~~--~~~~~~~dviH~r~~-----------~~---------~~~~~G~spi~~a~~~i~~~~~a~~~~ 208 (368) +|+...++. ...+.++.++++..- ++ .+...|.|.+......+.....+..-. T Consensus 158 ~~~~i~~~~~~~~~~~~~vyt~~~i~~~~~~~~~~~~~~~~~~~~g~vPvv~~~n~~~g~s~~~~v~~liDa~~~~~S~~ 237 (453) T protein:vir:73 158 PLFAVYYGFDEEGNLSGTVYTLLETISITGKAGEVKFGESTYNVYSDLPIVEYNFNEERQSIFEPVHSLINSYNKVTSEK 237 (453) T ss_pred eEEEEEEEEecCceEEEEEEeCCeEEEEEecCCceEEccceeccCCceeEEEecCCCCCCcchhhHHHHHHHHHHHHHHH Confidence 112222221 112233333222110 00 011246666665555554443333333 Q ss_pred HHHHhccCCCceeEEeCCCCccHHHHHHHHHHHHHhccccccccccccccCccccccccccccchhhHHHHHHHHHHHHH Q lcl|Aclame:pro 209 RRYYKNGSHAGFILYMTDAAQKQEDVDTLREAMKSAKGPGNFRNLFMYAPNGKKDGIQLLPVSEVAAKDEFWNIKNVTRD 288 (368) Q Consensus 209 ~~~f~ng~~p~gil~~~~~~l~~e~~~~~k~~~~~~~g~~n~~~~~~l~~~g~~~g~~~~pl~~~~~d~qf~e~~~~~~~ 288 (368) .+.....+.|-.+++ +..++++....++..--........+.... ...+.+++-++....+..+....+...+ T Consensus 238 ~~~~~~~~~~~l~~~--g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~d~~~l~~~~~~~~~~~~~~~l~~ 310 (453) T protein:vir:73 238 ANDVEYFSDQYLVFL--GAEVDEEDAKNIKDNRLINFFDKNSNGQGT-----NAAKVDVKFLDKPDSDVQTENLLNRLER 310 (453) T ss_pred HHHHHHhccceeeee--cCCCCchhhhcccccccccccccccccccc-----cccCceeEEeeecCCHHHHHHHHHHHHH Confidence 333444455665654 444555555544331100000011111111 1223333334434445666777788888 Q ss_pred HHHHHhCCChHHhcccccccccccCHHHHHHHHHHH---------------HHHHHHHHHHHHHhhcCc--c--e--Eee Q lcl|Aclame:pro 289 DQLAAHRVPPQLMGIIPNNTGGFGDVEKAAMVFARN---------------EVKPLQDRLLAINDWIGD--E--V--VRF 347 (368) Q Consensus 289 ~Ia~~fgVPp~~lg~~~~~~~~~sn~e~~~~~f~~~---------------tl~P~~~~ie~l~~~l~~--~--~--~~F 347 (368) .|+..-++|..--+ + ++|.......+... .|.-.++.+.++....+. + - +.| T Consensus 311 ~I~~~s~~p~~~~~----~---~gn~Sg~Al~~~~~~l~~ka~~~~~~~~~~l~~~~~li~~~~~~~~~~~~~~~i~v~f 383 (453) T protein:vir:73 311 SIFQFTMAANISDE----N---FGNSSGVALAYKLQAMSNLALSFQRKFQSALNRRYSLWSSLSTNASNKDAWKDIEYTF 383 (453) T ss_pred HHHHHhCCcccCcc----c---ccCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCccccccceEEe Confidence 99999999853221 1 12222222222222 222222222222111111 1 1 445 Q ss_pred chhhhhcCChhhhhhhhhhcC Q lcl|Aclame:pro 348 APYALGGHDQPAAAPGGQRSA 368 (368) Q Consensus 348 ~~~~Llr~D~~~ra~~~~~~~ 368 (368) + .-+--|.++.|+...+++ T Consensus 384 ~--~~~p~~~~~~a~~~~k~~ 402 (453) T protein:vir:73 384 T--RNEPKDIKEQAETANILK 402 (453) T ss_pred C--CCCCCCHHHHHHHHHHHh Confidence 4 333456667777666666 No 157 >protein:vir:103219 Length: 201 # NCBI annotation: hypothetical protein # Family: family:all:297 # MgeID: mge:1605 # MgeName: JK06 # Cross-refs: genbank:acc:YP_277473;genbank:gi:71834115;genbank:GeneID:3562330 Probab=94.33 E-value=0.00057 Score=38.36 Aligned_cols=133 Identities=11% Similarity=0.042 Sum_probs=69.9 Q ss_pred eEEeCC--CCccHHHHHHHHHHHH---HhccccccccccccccCccccccccccccchhhHHHHHHHHHHHHHHHHHHhC Q lcl|Aclame:pro 221 ILYMTD--AAQKQEDVDTLREAMK---SAKGPGNFRNLFMYAPNGKKDGIQLLPVSEVAAKDEFWNIKNVTRDDQLAAHR 295 (368) Q Consensus 221 il~~~~--~~l~~e~~~~~k~~~~---~~~g~~n~~~~~~l~~~g~~~g~~~~pl~~~~~d~qf~e~~~~~~~~Ia~~fg 295 (368) |+++++ ..++.. ...+++.++ ..+| +.+ .+++.. .++.++....+++.-+ +......+.||.+-| T Consensus 1 V~k~~~l~~~~~~~-~~~~~~r~~~~~~~~~--~~~-~~~ld~--~~e~~e~~~~~lsGl~----d~l~~~~~~iaa~s~ 70 (201) T protein:vir:10 1 MWKAKGLADLCDDS-DGAARLRLAQVDNNSG--VGQ-AIGIDA--DSEEYNVLNSDIGGID----TFLSQKFDRIVALSG 70 (201) T ss_pred CccchHHHHHhcCC-hHHHHHHHHHHHHhhh--hhh-hheeec--CCcceeeeecCcCChH----HHHHHHHHHHHhHhc Confidence 555543 011111 122333343 3332 222 233322 1234555555544333 344556788999999 Q ss_pred CChHHh-ccccccccccc-CHHHHHHHHHHH-------HHHHHHHHHHHHHhhcCcceEeechhhhhcCChhhhhhhhhh Q lcl|Aclame:pro 296 VPPQLM-GIIPNNTGGFG-DVEKAAMVFARN-------EVKPLQDRLLAINDWIGDEVVRFAPYALGGHDQPAAAPGGQR 366 (368) Q Consensus 296 VPp~~l-g~~~~~~~~~s-n~e~~~~~f~~~-------tl~P~~~~ie~l~~~l~~~~~~F~~~~Llr~D~~~ra~~~~~ 366 (368) ||...| |...+ +.+ +-+.-.+.||.. .|.|.+.++-++-.. +.-+.|.+..|...+.+.+|+...+ T Consensus 71 iP~t~LfG~sp~---Glnatge~d~~nyyd~i~~~Qe~~l~p~le~l~~~~~~--~~~~~~~f~pL~~~s~kekAei~~~ 145 (201) T protein:vir:10 71 IHEIILKGKNVG---GVSASQNTALETFYGYVDRKRKAELLPLLEFLLPFIVT--EQEWSVEFNPLSQVSDKDKSEILEK 145 (201) T ss_pred CchhhhcCCCCc---cccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC--CCCceEeeCCCCCCCHHHHHHHHHH Confidence 998776 55443 332 344455566554 455655554433221 2335566678999999999997777 Q ss_pred cC Q lcl|Aclame:pro 367 SA 368 (368) Q Consensus 367 ~~ 368 (368) -| T Consensus 146 ~a 147 (201) T protein:vir:10 146 NV 147 (201) T ss_pred HH Confidence 66 No 158 >protein:vir:2427 Length: 485 # NCBI annotation: gp14 # Family: family:all:524 # MgeID: mge:52 # MgeName: D29 # Cross-refs: genbank:acc:NP_046829;genbank:gi:9630397;genbank:GeneID:1261620 Probab=93.99 E-value=0.0057 Score=32.88 Aligned_cols=310 Identities=9% Similarity=-0.007 Sum_probs=108.6 Q ss_pred eEEEECCCceeccChHHHHHHHHH-------------Hhccchhc--ccccH-HHHHHHHHhcccccchhhhccchHHhh Q lcl|Aclame:pro 36 AEVFSFGDPVEVLDRRELLDYVEC-------------MRMGQWYE--PPMPW-DGLARSFRAAAHHSSAVYVKRNILVST 99 (368) Q Consensus 36 ~~~~~~g~p~~~~~~~~~~~~~~~-------------~~~~~~~~--~p~~~-~~l~~~~r~~~~~~~~~~~~~~~~l~~ 99 (368) +.+---|..+...+...+-..+.. ++.|.... .+... ..+........+. ..+.... ... T Consensus 1 ~~~~i~~~~~~~~~~~~~~~L~~~~~~~~~r~~~~~~YY~G~~~i~~~~~~~~~~~~~~~~~~n~~-~~ivd~~---~~~ 76 (485) T protein:vir:24 1 MTAPLPGQEEIADPAIARDEMVSAFEDQNQNLRSNTSYYEAERRPEAIGVTVPVQMQSLLAHVGYP-RLYVDSI---AER 76 (485) T ss_pred CCCCCCCCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHhccCchhhcCcccchhhhhhhhccchH-HHHHHHH---hhh Confidence 000001111122221111000111 11121100 00000 0000000000000 0000000 000 Q ss_pred ccCCCCc-------------------CHHHHHHHHHhHhhhCCeeEEEEecCCcce-------EEEEEecccccccccCC Q lcl|Aclame:pro 100 FIPHPLL-------------------SRATFERLVLDWQVFGNAYLERRENVLGGT-------IRLDTPLAKYVRRGLDL 153 (368) Q Consensus 100 ~~~n~~~-------------------~~~~~~~~~~~~ll~Gnay~~i~r~~~G~~-------~~L~~l~p~~v~~~~~~ 153 (368) ..++++. -......+..+.+.+|.||..+.++.++.+ ..+.+++|..+.+..+. T Consensus 77 l~~~g~~~~~~~~~~~~l~~i~~~N~~d~~~~~~~~~a~i~G~ay~~v~~~~~~~~~~~~~~~~~i~~~~p~~~~~i~D~ 156 (485) T protein:vir:24 77 QAVEGFRLGDADEADEELWQWWQANNLDIEAPLGYTDAYVHGRSYITISRPDPQIDLGWDPNVPLIRVEPPTRMYAEIDP 156 (485) T ss_pred hccCceecCCCchhHHHHHHHHHhcChhHHHHHHHHHHhhcCceEEEEecCCcccccccCCCcceEEEeccceeEEEeeC Confidence 0111111 012334566788899999999988765432 25777777776554332 Q ss_pred C------ee--EEEeCCceE---EEEcCc-------------------------cEEEecCCCCcCCccccchhhH-HHH Q lcl|Aclame:pro 154 N------TY--FFVQNWQQP---YTFAAG-------------------------SVFHLQEPDINQEVYGLPEYLS-ALN 196 (368) Q Consensus 154 ~------~~--~~~~~~~~~---~~~~~~-------------------------dviH~r~~~~~~~~~G~spi~~-a~~ 196 (368) . .+ ++...++.. ..|.++ .|+||++..-.++.+|.|.+.- ... T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~h~~g~vPvv~f~n~~~~~~~~G~s~i~~~v~~ 236 (485) T protein:vir:24 157 RIGRPAKAIRVAYDAEGNEIQAATLYTPNETFGWFRAEGEWVEWFSDPHGLGAVPVVPLPNRTRLSDLYGTSEITPELRS 236 (485) T ss_pred CcCceeEEEEEEEeecCCeEEEEEEEcCCcEEEEEecCCceEeecccccCCCcccEEEeccCcccCCcCCcccchhhHHH Confidence 1 01 000011100 011111 2567765433456788886642 222 Q ss_pred HHHHHHHHHHHHHHHHhccCCCceeEEeCCCCccHHHHHH--HHHHHHHhccccccccccccccCccccccccccccchh Q lcl|Aclame:pro 197 ATWLNESATLFRRRYYKNGSHAGFILYMTDAAQKQEDVDT--LREAMKSAKGPGNFRNLFMYAPNGKKDGIQLLPVSEVA 274 (368) Q Consensus 197 ~i~~~~~a~~~~~~~f~ng~~p~gil~~~~~~l~~e~~~~--~k~~~~~~~g~~n~~~~~~l~~~g~~~g~~~~pl~~~~ 274 (368) .+.....+..-........+.|--+|. +..+.+...+. -...|+.. .+..+.+ ++ .+.++..+.... T Consensus 237 liDa~~~~~s~~~~~~~~~a~p~~~i~--G~~~~~~~~~~~~~~~~~~~~-----~~~i~~~-~~---~~~~~~q~~~~~ 305 (485) T protein:vir:24 237 MTDAAARILMLMQATAELMGVPQRLIF--GIKPEEIGVDPETGQTLFDAY-----LARILAF-ED---AEGKIQQFSAAE 305 (485) T ss_pred HHHHHHHHHHHHHHHHHhhcchhhhhc--cCCccccccccccccchhhhc-----ccceecc-CC---CCceEEeecccc Confidence 233222222222222222344554443 21111111000 01112221 1222222 11 234554444332 Q ss_pred hHHHHHHHHHHHHHHHHHHhCCChHHhcccccccccccCHHHHHHHHHHHHHHHHHHHHH---------------HHHhh Q lcl|Aclame:pro 275 AKDEFWNIKNVTRDDQLAAHRVPPQLMGIIPNNTGGFGDVEKAAMVFARNEVKPLQDRLL---------------AINDW 339 (368) Q Consensus 275 ~d~qf~e~~~~~~~~Ia~~fgVPp~~lg~~~~~~~~~sn~e~~~~~f~~~tl~P~~~~ie---------------~l~~~ 339 (368) -+ .|++..+..+.+++..=++|++.+|....+.+ ....+.+....|.-.+.+.+ .+... T Consensus 306 ~e-~~~~~l~~~i~~~s~~~~~p~~~fg~~~~n~~-----Sg~Al~~~~~~l~~ka~~~~~~f~~~l~~~~~l~~~~~~~ 379 (485) T protein:vir:24 306 LA-NFTNALDQIAKQVAAYTGLPPQYLSTAADNPA-----SAEAIRAAESRLIKKVERKNAIFGGAWEEAMRLAYRLMKG 379 (485) T ss_pred hH-HHHHHHHHHHHHHhcccCCCHHHhccccCcch-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC Confidence 22 37888888888888888999999975432211 12222222222222222111 11111 Q ss_pred cC--cc----eEeechhhhhcCChhhhhhhhhhcC Q lcl|Aclame:pro 340 IG--DE----VVRFAPYALGGHDQPAAAPGGQRSA 368 (368) Q Consensus 340 l~--~~----~~~F~~~~Llr~D~~~ra~~~~~~~ 368 (368) .. .. .+.|.... --+.+..|+...+-+ T Consensus 380 ~~~~~d~~~i~v~f~~~~--~~s~~~~ad~~~kl~ 412 (485) T protein:vir:24 380 GDVPPDMLRMETVWRDPS--TPTYAAKADAATKLY 412 (485) T ss_pred CCCccccceeeEEecCCC--CCCHHHHHHHHHHHH Confidence 11 01 13442111 122333333333321 No 159 >protein:vir:1236 Length: 483 # NCBI annotation: similar to phage Spp1 gp6 (portal protein) # Family: family:all:125 # MgeID: mge:25 # MgeName: phi ETA # Cross-refs: genbank:acc:NP_510935;genbank:gi:17426269;genbank:GeneID:927380 Probab=93.33 E-value=0.0079 Score=32.10 Aligned_cols=321 Identities=8% Similarity=0.032 Sum_probs=119.1 Q ss_pred CCcCCCCccccccccccccccCCCcchhhccccCceEEEECCCceeccChHHHHHHHH-HHh--ccchhcccccHHHHHH Q lcl|Aclame:pro 1 MSRNKTRRAARAASAHVRTANTDAPTEHHTDRAAQAEVFSFGDPVEVLDRRELLDYVE-CMR--MGQWYEPPMPWDGLAR 77 (368) Q Consensus 1 m~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~-~~~--~~~~~~~p~~~~~l~~ 77 (368) .++-+.+.++...-..-=.....+.... ......... ++... .++-+..+.. ++. .+-....|+.+.+ T Consensus 44 i~~~~~~~~r~~~l~~YY~g~~~i~~~~--~~~~~~~~~---~~~~~-~~ki~~n~~k~Ivd~~~~~l~G~p~~~~~--- 114 (483) T protein:vir:12 44 IKQHLEKLPEISIGQEYYEQRPDIVKEP--KPVDATGAV---DPLKP-DDRMITNFHANLVDQKVSYIVGKPIAFKH--- 114 (483) T ss_pred HHHHHHHHHHHHHHHHHhcccccccccc--ccccccccc---ccccc-ccccccchHHHHHHHHhhhhcccCceecc--- Confidence 1100000000000000000000000000 000000000 00000 0000001110 000 1112222332210 Q ss_pred HHHhcccccchhhhccchHHhhccCCCCcCHHHHHHHHHhHhhhCCeeEEEEecCCcceEEEEEecccccccccCCC--- Q lcl|Aclame:pro 78 SFRAAAHHSSAVYVKRNILVSTFIPHPLLSRATFERLVLDWQVFGNAYLERRENVLGGTIRLDTPLAKYVRRGLDLN--- 154 (368) Q Consensus 78 ~~r~~~~~~~~~~~~~~~~l~~~~~n~~~~~~~~~~~~~~~ll~Gnay~~i~r~~~G~~~~L~~l~p~~v~~~~~~~--- 154 (368) .. .+....+..+..|. .......+..+.+.+|.+|..+..+.+|++ .+..++|..+.+..+.. T Consensus 115 ------~d-----~~~~~~l~~~~~n~--~~~~~~~~~~~~~~~G~~y~~v~~d~d~~~-~i~~~~p~~~~~v~d~~~~~ 180 (483) T protein:vir:12 115 ------TD-----DEVVKRIDEVLGNR--FDDKLHSVLTGASNKGIEWLHPYLDEEGEF-KLFRVPAEQGIPIWTDKEHE 180 (483) T ss_pred ------CC-----hHHHHHHHHHHhcc--HHHHHHHHHHHHhhCCeEEEEEEEcCCCce-EEEEEcccceEEEEcCCCCC Confidence 00 00011121122231 123445567788999999999999988875 47777887775543311 Q ss_pred -e-----eEEEeCCceEEEEcCccEEEecCC---------------------CC---------cCCccccchhhHHHHHH Q lcl|Aclame:pro 155 -T-----YFFVQNWQQPYTFAAGSVFHLQEP---------------------DI---------NQEVYGLPEYLSALNAT 198 (368) Q Consensus 155 -~-----~~~~~~~~~~~~~~~~dviH~r~~---------------------~~---------~~~~~G~spi~~a~~~i 198 (368) . ||..........+.+..|.|+... ++ .+...|.|-+......+ T Consensus 181 ~~~~~ir~~~~~~~~~~~~y~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~vPvv~~~nn~~g~sd~e~v~~li 260 (483) T protein:vir:12 181 ELEAFIRMYKLENETKVEYWDKVTVNYYVYENGSLIPDYSNNLENSKTHFSTGSWGKIPFIPFKNNDLEISDIFMYKTLI 260 (483) T ss_pred ceEEEEEEEEeecceEEEEEecCeEEEEEEeCCeeeecccccccccccccccCCCCccceEEecCCCCCCCchhhHHHHH Confidence 0 111111111222222222222100 00 01124667776655555 Q ss_pred HHHHHHHHHHHHHHhccCCCceeEEeCCCCccHHHHHHHHHHHHHhccccccccccccccCccccccccccccchhhHHH Q lcl|Aclame:pro 199 WLNESATLFRRRYYKNGSHAGFILYMTDAAQKQEDVDTLREAMKSAKGPGNFRNLFMYAPNGKKDGIQLLPVSEVAAKDE 278 (368) Q Consensus 199 ~~~~~a~~~~~~~f~ng~~p~gil~~~~~~l~~e~~~~~k~~~~~~~g~~n~~~~~~l~~~g~~~g~~~~pl~~~~~d~q 278 (368) .....+..-..+.+...+.|-.+++ +... +.....+..++. .+.+.+..+ .+++|. .....+.. T Consensus 261 Da~d~~~S~~~~~~~~~~~~~lv~~--g~~~--~~~~~~~~~~~~-------~~~~~~~~~---~~~~~l--~~~~~~~~ 324 (483) T protein:vir:12 261 DAYNRRLSDLSNTFKDSNELTYVLT--NYDD--QELPEFKRLLRY-------YGAIKVSDN---GGVDTI--QVEVPVEN 324 (483) T ss_pred HHHHHHHHHHHHHHHHhcCceeeee--cCCc--ccchhHHHhhhh-------ccccccCCC---CcceEE--eecCCHHH Confidence 5544444444444555566765654 3211 211122222211 122222222 234443 33334556 Q ss_pred HHHHHHHHHHHHHHHhCCChHHhcccccccccccCHHHHHHHHHHHHHHHHHHHHH--------H----HHhhcCc---- Q lcl|Aclame:pro 279 FWNIKNVTRDDQLAAHRVPPQLMGIIPNNTGGFGDVEKAAMVFARNEVKPLQDRLL--------A----INDWIGD---- 342 (368) Q Consensus 279 f~e~~~~~~~~Ia~~fgVPp~~lg~~~~~~~~~sn~e~~~~~f~~~tl~P~~~~ie--------~----l~~~l~~---- 342 (368) +.+..+...+.|+..-++|....+...+ |.....+.+....+.-.+...+ + +...++. T Consensus 325 ~~~~~~~l~~~I~~~s~~p~~~~~~~~~------n~Sg~Al~~~~~~l~~k~~~~~~~f~~~l~~~~~li~~~~~~~~~~ 398 (483) T protein:vir:12 325 SKKYLDELYQKIMLFGQAVDFSSDKFGS------APSGVALEFLYTNLNLKADKLARKAKVAIQELLWFVFEHFDIKGEH 398 (483) T ss_pred HHHHHHHHHHHHHHHhCCCCCCcccccc------CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcc Confidence 7777777888999999999754432211 2222222222222221111111 1 1111221 Q ss_pred ce--EeechhhhhcCChhhhhhhhhhcC Q lcl|Aclame:pro 343 EV--VRFAPYALGGHDQPAAAPGGQRSA 368 (368) Q Consensus 343 ~~--~~F~~~~Llr~D~~~ra~~~~~~~ 368 (368) .. +.|+ .-+--|.+..++...+++ T Consensus 399 ~~i~v~f~--~~~p~~~~~~a~~~~kl~ 424 (483) T protein:vir:12 399 KDVDISFN--YNKVANTELQVQTAQQSM 424 (483) T ss_pred ceeeEEeC--CCCCCCHHHHHHHHHHHh Confidence 11 3453 233346666677777666 No 160 >protein:vir:3964 Length: 453 # NCBI annotation: putative portal protein # Family: family:all:125 # MgeID: mge:83 # MgeName: ul36 # Cross-refs: genbank:acc:NP_663672;genbank:gi:21716109;genbank:GeneID:951201 Probab=93.23 E-value=0.0083 Score=31.99 Aligned_cols=308 Identities=9% Similarity=0.001 Sum_probs=116.0 Q ss_pred CCcC----CCCccccccccccccccCCCcchhhccccCceEEEECCCceeccChHHHHHHHHHHhccchhcccccHHHHH Q lcl|Aclame:pro 1 MSRN----KTRRAARAASAHVRTANTDAPTEHHTDRAAQAEVFSFGDPVEVLDRRELLDYVECMRMGQWYEPPMPWDGLA 76 (368) Q Consensus 1 m~~~----k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~ 76 (368) +..+ +.-.+-+.....-...+... ... ..... .++=|--+ .+. ..+-....|+.+.. T Consensus 29 ~~~~~~r~~~~~~yy~g~~~i~~~~~~~----~~~--~~~ki-~~n~~~~i------vd~----~~~~l~g~~~~~~~-- 89 (453) T protein:vir:39 29 HRLEVARYEYLKNMYRGIMAIDAEPTKD----LWK--PDNRL-TVNFTKYI------VDT----FTGYFNGIPVKKSH-- 89 (453) T ss_pred HHHHHHHHHHHHHHhhccCchhcCCCcc----ccC--cccee-ecchHHHH------HHH----HhhhhcccCceecc-- Confidence 1100 00000000000000000000 000 00000 01101000 000 00111112222110 Q ss_pred HHHHhcccccchhhhccchHHhh-ccCCCCcCHHHHHHHHHhHhhhCCeeEEEEecCCcceEEEEEecccccccccCCCe Q lcl|Aclame:pro 77 RSFRAAAHHSSAVYVKRNILVST-FIPHPLLSRATFERLVLDWQVFGNAYLERRENVLGGTIRLDTPLAKYVRRGLDLNT 155 (368) Q Consensus 77 ~~~r~~~~~~~~~~~~~~~~l~~-~~~n~~~~~~~~~~~~~~~ll~Gnay~~i~r~~~G~~~~L~~l~p~~v~~~~~~~~ 155 (368) +. .+....+.. +..| --......+..+.+.+|.||..+..+.+|++ .+..++|..+.+..+... T Consensus 90 ---------~d---~~~~~~l~~i~~~N--~~~~~~~~~~~~~~~~G~~~~~v~~d~~g~~-~i~~~~p~~~~~v~d~~~ 154 (453) T protein:vir:39 90 ---------SD---KETLSKLQEFDNLN--DMEDEESELAKMACIYGRAFELLYQNEETQT-NVIYNTPENMFMVYDDTI 154 (453) T ss_pred ---------CC---hHHHHHHHHHHHhc--ChhHHHHHHHHHHhhcCeEEEEEEecCCCce-EEEEEcccceEEEecCCC Confidence 00 000011111 1112 1123556678899999999999999988875 455566666654432110 Q ss_pred -------eEEEeCCce---EEEEcCcc-------------------------EEEecCCCCcCCccccchhhHHHHHHHH Q lcl|Aclame:pro 156 -------YFFVQNWQQ---PYTFAAGS-------------------------VFHLQEPDINQEVYGLPEYLSALNATWL 200 (368) Q Consensus 156 -------~~~~~~~~~---~~~~~~~d-------------------------viH~r~~~~~~~~~G~spi~~a~~~i~~ 200 (368) ..++..++. ...+.++. |+++++ .-.|+|.+......+.. T Consensus 155 ~~~~~~~ir~~~~~~~~~~~~~yt~~~i~~~~~~~~~~~~~~~~~~~~g~vPvv~~~n-----~~~g~sd~e~v~~liDa 229 (453) T protein:vir:39 155 KQEPLFAVRYGYDDDYKLYGEVYTKETTYALNGTMGFYNMTEQAPNPFDDLPVVEFYF-----NEERMSIFESVISLVNA 229 (453) T ss_pred CCeEEEEEEEEEeCCeEEEEEEEeCCeEEEEEecCCceeeecccccCCCceeEEEecC-----CCCCCcchhhhHHHHHH Confidence 000000110 01111111 334332 12477777655555544 Q ss_pred HHHHHHHHHHHHhccCCCceeEEeCCCCccHHHHHHHHHHHHHhccccccccccccccCccccccccccccchhhHHHHH Q lcl|Aclame:pro 201 NESATLFRRRYYKNGSHAGFILYMTDAAQKQEDVDTLREAMKSAKGPGNFRNLFMYAPNGKKDGIQLLPVSEVAAKDEFW 280 (368) Q Consensus 201 ~~~a~~~~~~~f~ng~~p~gil~~~~~~l~~e~~~~~k~~~~~~~g~~n~~~~~~l~~~g~~~g~~~~pl~~~~~d~qf~ 280 (368) ...+..-..+.....+.|-.+++ +..++++....++.. +...+....+...+.++..++.......+. T Consensus 230 ~~~~~s~~~~~~~~~~~p~~~~~--g~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~lt~~~~~~~~~ 297 (453) T protein:vir:39 230 FNKAISEKANDVDYFSDQYLTFL--GAAVEEEDLKNIRSN----------RVINYYGESSEAKNVDVKFLEKPDSDSQTE 297 (453) T ss_pred HHHHHHHHHHHHHHhhCceeeee--cCCCCchhhhhhhhc----------ceeeecCCCCCCCCCceeEEeecCCHHHHH Confidence 33333333333444556766654 444565554433221 000000001111222333344334456667 Q ss_pred HHHHHHHHHHHHHhCCChHHhcccccccccccCHHHHHHHH---------------HHHHHHHHHHHHHHHHhhcCcc-- Q lcl|Aclame:pro 281 NIKNVTRDDQLAAHRVPPQLMGIIPNNTGGFGDVEKAAMVF---------------ARNEVKPLQDRLLAINDWIGDE-- 343 (368) Q Consensus 281 e~~~~~~~~Ia~~fgVPp~~lg~~~~~~~~~sn~e~~~~~f---------------~~~tl~P~~~~ie~l~~~l~~~-- 343 (368) +..+...+.|...-++|..-.+.. +|.......+ +...|...++.+.++....+.. T Consensus 298 ~~~~~l~~~I~~~s~~p~~~~~~~-------gn~Sg~Al~~~~~~l~~ka~~~~~~~~~~l~~~~~li~~~~~~~~~~~~ 370 (453) T protein:vir:39 298 NLLDRLTKLIFQTTMVANISDESF-------GSSSGVSLAYKLQAMSNLALSFQRKFQSSLNSRYKLYCELSTNVSNKEA 370 (453) T ss_pred HHHHHHHHHHHHHhCCcccccccc-------cCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCccc Confidence 778888889999999985332211 1211111212 2222322222222222111111 Q ss_pred ----eEeechhhhhcCChhhhhhhhhhcC Q lcl|Aclame:pro 344 ----VVRFAPYALGGHDQPAAAPGGQRSA 368 (368) Q Consensus 344 ----~~~F~~~~Llr~D~~~ra~~~~~~~ 368 (368) -+.|+ .-+--|.++.|+...+.+ T Consensus 371 ~~~i~v~f~--~~~p~~~~~~a~~~~kl~ 397 (453) T protein:vir:39 371 WKDIEYTFT--RNEPKDIKEQAETANILM 397 (453) T ss_pred cccceEEeC--CCCCcCHHHHHHHHHHHh Confidence 14554 333355666677666666 No 161 >protein:vir:2732 Length: 501 # NCBI annotation: putative portal protein # Family: family:all:125 # MgeID: mge:58 # MgeName: O1205 # Cross-refs: genbank:acc:NP_695105;genbank:gi:23455874;genbank:GeneID:955614 Probab=93.08 E-value=0.0089 Score=31.83 Aligned_cols=327 Identities=12% Similarity=0.028 Sum_probs=122.2 Q ss_pred CCcCCCCcccc--------ccccccccccCCCcchhhccccCceEEEECCCceeccChHHHHHHHHHHhccchhcccccH Q lcl|Aclame:pro 1 MSRNKTRRAAR--------AASAHVRTANTDAPTEHHTDRAAQAEVFSFGDPVEVLDRRELLDYVECMRMGQWYEPPMPW 72 (368) Q Consensus 1 m~~~k~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 72 (368) +++-+.+...| ..+.+.-..+.... ....+..-...+-| ..+.+. ..+-....|+.+ T Consensus 48 i~~~~~~~~~r~~~l~~yY~g~~~~i~~~~~~~-----~~~~~~~ki~~n~~------k~Ivd~----~~~yl~g~p~~~ 112 (501) T protein:vir:27 48 INHHKLRQAPRIQELLDYARGENHDVLQFGRRK-----DREMADKRAVHNYG------RMISKF----KTGYLAGNPIRV 112 (501) T ss_pred HHHHHHHHHHHHHHHHHHhcCCCccccccCccC-----ccccccceeccchH------HHHHHH----HhhhhcccCeeE Confidence 11111111000 00101000000000 00000000000000 001010 011122223322 Q ss_pred HHHHHHHHhcccccchhhhccchHHh-hccCCCCcCHHHHHHHHHhHhhhCCeeEEEEecCCcceEEEEEeccccccccc Q lcl|Aclame:pro 73 DGLARSFRAAAHHSSAVYVKRNILVS-TFIPHPLLSRATFERLVLDWQVFGNAYLERRENVLGGTIRLDTPLAKYVRRGL 151 (368) Q Consensus 73 ~~l~~~~r~~~~~~~~~~~~~~~~l~-~~~~n~~~~~~~~~~~~~~~ll~Gnay~~i~r~~~G~~~~L~~l~p~~v~~~~ 151 (368) .+-. ..... .....+. .+.-| .-......+..+++.+|.+|..+.++.+|++ .+..++|..+.+.. T Consensus 113 ~~~d--------~~~~~--~~~~~l~~~~~~n--~~~~~~~~~~~~~~~~G~a~~~vy~ded~~~-~i~~~~p~~~~~v~ 179 (501) T protein:vir:27 113 EYDD--------NDNNS--QNDDTIKRIGRIN--DIDSHNRTLIRDLSQTGRAYEVIYRNEYDET-RIKRLNPLETFVIY 179 (501) T ss_pred ecCC--------ccchH--HHHHHHHHHHHhc--ChhHHHHHHHHHHhhCCeEEEEEEeCCCCce-EEEEEccceeEEEe Confidence 1000 00000 0000010 11112 1224566778899999999999999888864 45667777665443 Q ss_pred CCC----e-----eEEEeC-Cce---EEEEcCcc------------------------EEEecCCCCcCCccccchhhHH Q lcl|Aclame:pro 152 DLN----T-----YFFVQN-WQQ---PYTFAAGS------------------------VFHLQEPDINQEVYGLPEYLSA 194 (368) Q Consensus 152 ~~~----~-----~~~~~~-~~~---~~~~~~~d------------------------viH~r~~~~~~~~~G~spi~~a 194 (368) +.. . ||.... ++. ...+.++. |+++++ ...|+|.+... T Consensus 180 d~~~~~~~~~~ir~~~~~~~~~~~~~~~vyt~~~v~~~~~~~~~~~~~~~~~~~g~vPvv~~~n-----n~~g~sd~e~v 254 (501) T protein:vir:27 180 DNSLEDNSIAAVRYYNRGTLQNAKDVVEIYTNEHIYTLDASDDFNEISVTTHAFGTVPITEFLN-----NVDGIGDYETE 254 (501) T ss_pred cCCCCCceEEEEEEEEeeecCCcEEEEEEEeCCeEEEEEeCCceeeccccccCCCcccEEEecC-----CCCCCCchhhh Confidence 221 0 111110 110 01112222 334332 23577777766 Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCceeEEeCCCCccHHHHHHHHHHHHHhccccccccccccccCccccccccccccchh Q lcl|Aclame:pro 195 LNATWLNESATLFRRRYYKNGSHAGFILYMTDAAQKQEDVDTLREAMKSAKGPGNFRNLFMYAPNGKKDGIQLLPVSEVA 274 (368) Q Consensus 195 ~~~i~~~~~a~~~~~~~f~ng~~p~gil~~~~~~l~~e~~~~~k~~~~~~~g~~n~~~~~~l~~~g~~~g~~~~pl~~~~ 274 (368) ...+.....+..-..+.+...+.|-.+++-......++....++... .......+.. .|...+.+++.++... T Consensus 255 ~~liDa~d~~~S~~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~--~~~~~~~~~~-----~~~~~~~~~~~l~~~~ 327 (501) T protein:vir:27 255 LYLIDLYDSAESDTANHMSDMADAILAIYGDLALPKGMQASDMKRTR--LMQLKPPKSA-----DGKEGTVKAEYLTKSY 327 (501) T ss_pred HHHHHHHHHHHHHHHHHHHHhcCceeeeecCccCCcccchhhhhhcC--ceeecccccc-----cCCCCCcceeeeeccC Confidence 66666655555555555555556666654211111222222222100 0000000000 1112344555555444 Q ss_pred hHHHHHHHHHHHHHHHHHHhCCChHHhcccccccccccCHHHH----------HHHHHHHHHHHHHHHHHHHHhhcCc-- Q lcl|Aclame:pro 275 AKDEFWNIKNVTRDDQLAAHRVPPQLMGIIPNNTGGFGDVEKA----------AMVFARNEVKPLQDRLLAINDWIGD-- 342 (368) Q Consensus 275 ~d~qf~e~~~~~~~~Ia~~fgVPp~~lg~~~~~~~~~sn~e~~----------~~~f~~~tl~P~~~~ie~l~~~l~~-- 342 (368) .+..+.+..+.....|+.+-++|....+...++ .++..++-. ....+...|.-.++.+.++-...+. T Consensus 328 ~~~~~~~~~~~l~~~I~~~s~~p~~~~~~~~~n-~Sg~Al~~~~~~l~~ka~~~~~~~~~~l~~~~~li~~~~~~~~~~~ 406 (501) T protein:vir:27 328 DVSGAEAYKTRLNRDIHIFTNIPDMSDTNFSGN-TSGEALKYKLFGLDQDRVDTQSQFTQGLKRRYRLAARIGSLVNEFK 406 (501) T ss_pred CHHHHHHHHHHHHHHHHHHhCCcccCccccccC-chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccc Confidence 455566777888899999999997655432221 111111100 0011222222222222211111111 Q ss_pred --c--eEeechhhhhcCChhhhhhhhhhcC Q lcl|Aclame:pro 343 --E--VVRFAPYALGGHDQPAAAPGGQRSA 368 (368) Q Consensus 343 --~--~~~F~~~~Llr~D~~~ra~~~~~~~ 368 (368) + -+++.+..-+--|.+..|+...+++ T Consensus 407 ~~d~~~i~v~f~~~~p~n~~e~ad~~~kl~ 436 (501) T protein:vir:27 407 DFDESLLKITFTPNLPKSLNEQVSILTGLG 436 (501) T ss_pred ccccccceEEeCCCCCcCHHHHHHHHHHHh Confidence 1 1222223333345666666666666 No 162 >protein:vir:95113 Length: 474 # NCBI annotation: ORF007 # Family: family:all:125 # MgeID: mge:1549 # MgeName: X2 # Cross-refs: genbank:acc:YP_240817;genbank:gi:66394677;genbank:GeneID:5133907 Probab=92.55 E-value=0.011 Score=31.33 Aligned_cols=313 Identities=8% Similarity=0.041 Sum_probs=113.7 Q ss_pred CCcCCCCccccccccccccccCCCcchhhccccCceEEEECCCce-e-ccChH-HHHHHHHHHhccchhcccccHHHHHH Q lcl|Aclame:pro 1 MSRNKTRRAARAASAHVRTANTDAPTEHHTDRAAQAEVFSFGDPV-E-VLDRR-ELLDYVECMRMGQWYEPPMPWDGLAR 77 (368) Q Consensus 1 m~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~p~-~-~~~~~-~~~~~~~~~~~~~~~~~p~~~~~l~~ 77 (368) +.+.+.+.++...-..--.....+... ............+.|. . +.+.. .+.+.. .+-....|+.+.+ T Consensus 36 i~~~~~~~~~~~~~~~Yy~g~~~i~~r--~~~~~~~~~~~~~~~~~ki~~n~~~~Ivd~~----~~~l~g~p~~~~~--- 106 (474) T protein:vir:95 36 IDDHRKQLDKITVGQRYYDKDNDIVKQ--MKKVDVYGNIDYDKPDWRITTNFHQNLVDQK----VSYVASKPVTYSC--- 106 (474) T ss_pred HHHHHHHHHHHHHHHHHhcccCchhcc--ccccccccccccccccceeccchHHHHHHHH----HhhhccCCceecc--- Confidence 000000000000000000000000000 0000000000000000 0 00000 010100 0111122322110 Q ss_pred HHHhcccccchhhhccchHHhhccCCCCcCHHHHHHHHHhHhhhCCeeEEEEecCCcceEEEEEecccccccccCCC--- Q lcl|Aclame:pro 78 SFRAAAHHSSAVYVKRNILVSTFIPHPLLSRATFERLVLDWQVFGNAYLERRENVLGGTIRLDTPLAKYVRRGLDLN--- 154 (368) Q Consensus 78 ~~r~~~~~~~~~~~~~~~~l~~~~~n~~~~~~~~~~~~~~~ll~Gnay~~i~r~~~G~~~~L~~l~p~~v~~~~~~~--- 154 (368) .. .+....+..+..|. .......++.+.+.+|.+|..+.++.+|++ .+..++|..+-+..+.. T Consensus 107 ------~d-----~~~~~~l~~~~~n~--~~~~~~e~~~~~~~~G~~~~~v~~d~~~~~-~i~~~~p~~~~~v~d~~~~~ 172 (474) T protein:vir:95 107 ------ED-----ESVLKIIHDVLDTR--WDNKLIDILTATSNKGIDWLQVYINENGEM-KLFRVPAEQAIPIWVDKERE 172 (474) T ss_pred ------Cc-----hHHHHHHHHHHhcc--HHHHHHHHHHHHhhcCcEEEEEEecCCCce-EEEEEcccceEEEEcCCCCC Confidence 00 00001111111121 123445577888999999999999888864 46667776665443221 Q ss_pred -e-----eEEEeCCceEEEEcCccE-----------------------------------EEecCCCCcCCccccchhhH Q lcl|Aclame:pro 155 -T-----YFFVQNWQQPYTFAAGSV-----------------------------------FHLQEPDINQEVYGLPEYLS 193 (368) Q Consensus 155 -~-----~~~~~~~~~~~~~~~~dv-----------------------------------iH~r~~~~~~~~~G~spi~~ 193 (368) . ||..........+.++.| ++++. ...|+|-+.- T Consensus 173 ~~~~~i~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iPvv~~~n-----n~~g~sd~e~ 247 (474) T protein:vir:95 173 ELKSFIRYYKFNNEEKVEFWTDTTVTYYVLENGGLIPDYYYGANHIQSHFSNGNWGRVPFIAFKN-----NPEEVSDIWM 247 (474) T ss_pred ceEEEEEEEEEcCeeEEEEEeCCeEEEEEEcCCccccccccCcccccccccccCCCccceEeecC-----CCCCCCcHHH Confidence 0 111111111222222233 33322 1246676665 Q ss_pred HHHHHHHHHHHHHHHHHHHhccCCCceeEEeCCCCccHHHHHHHHHHHHHhccccccccccccccCccccccccccccch Q lcl|Aclame:pro 194 ALNATWLNESATLFRRRYYKNGSHAGFILYMTDAAQKQEDVDTLREAMKSAKGPGNFRNLFMYAPNGKKDGIQLLPVSEV 273 (368) Q Consensus 194 a~~~i~~~~~a~~~~~~~f~ng~~p~gil~~~~~~l~~e~~~~~k~~~~~~~g~~n~~~~~~l~~~g~~~g~~~~pl~~~ 273 (368) ....+.....+..-..+.+...+.|-.++. +..+++ .+.+.... ...+++.+..+ .+++| ++.. T Consensus 248 v~~liDa~d~~~S~~~~~~~~~~~p~lv~~--g~~~~~--~~~~~~~~-------~~~~~i~~~~~---~~~~~--l~~~ 311 (474) T protein:vir:95 248 YKSLIDAIDKRLSDAQNMFDESVELIYILK--GYEGQD--LEEFMRGL-------KYYKAINVDGD---GGVET--IQVE 311 (474) T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCceeeee--cCCccc--chhhhhhh-------hccceeeccCC---CceeE--Eeec Confidence 555555544444444444455566655553 432222 11122211 12333333222 23444 3333 Q ss_pred hhHHHHHHHHHHHHHHHHHHhCCChHHhcccccccccccCHHHHHHHH---------------HHHHHHHHHHHHHHHHh Q lcl|Aclame:pro 274 AAKDEFWNIKNVTRDDQLAAHRVPPQLMGIIPNNTGGFGDVEKAAMVF---------------ARNEVKPLQDRLLAIND 338 (368) Q Consensus 274 ~~d~qf~e~~~~~~~~Ia~~fgVPp~~lg~~~~~~~~~sn~e~~~~~f---------------~~~tl~P~~~~ie~l~~ 338 (368) .....+.+..+...+.|+..-++|..--+-.. +|.......+ +...|...++.|. . T Consensus 312 ~~~~~~~~~~~~l~~~i~~~s~~p~~~~~~~~------~n~Sg~Alk~~~~~l~~k~~~k~~~~~~~l~~~~~li~---~ 382 (474) T protein:vir:95 312 VPVSSTKEYIDLMRAYIMEFGQGVDFQTDKFG------SAPSGIALKFLYGNLDLKANKLKNKATVAIQELIGFII---D 382 (474) T ss_pred CCHHHHHHHHHHHHHHHHHHhCCccccccccc------ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---H Confidence 44566777788889999999999964322111 1121211111 1222222222222 2 Q ss_pred hcCcc------eEeechhhhhcCChhhhhhhhhhcC Q lcl|Aclame:pro 339 WIGDE------VVRFAPYALGGHDQPAAAPGGQRSA 368 (368) Q Consensus 339 ~l~~~------~~~F~~~~Llr~D~~~ra~~~~~~~ 368 (368) .++.. -+.|+... -.|.+..|+...++. T Consensus 383 ~~g~~~d~~~i~v~f~~~~--p~d~~e~a~~~~~~g 416 (474) T protein:vir:95 383 FNNLKMDVKDIEISFNFNR--MMNDAEQSQIIAQSQ 416 (474) T ss_pred HhCCCcccceeeEEeccCC--CcCHHHHHHHHHhcC Confidence 22221 14554332 234455555444433 No 163 >protein:vir:106491 Length: 646 # NCBI annotation: Pas4 # Family: family:all:2798 # MgeID: mge:1680 # MgeName: phiAsp2 # Cross-refs: genbank:acc:YP_024790;genbank:gi:48697405;genbank:GeneID:2846148 Probab=92.41 E-value=0.012 Score=31.21 Aligned_cols=352 Identities=9% Similarity=-0.003 Sum_probs=167.3 Q ss_pred CCcCCCC--ccccccc--cccccccCCCcchhhccccCceEEEECCCceeccChHHHHHHHHHHhcc-------chhccc Q lcl|Aclame:pro 1 MSRNKTR--RAARAAS--AHVRTANTDAPTEHHTDRAAQAEVFSFGDPVEVLDRRELLDYVECMRMG-------QWYEPP 69 (368) Q Consensus 1 m~~~k~~--~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~-------~~~~~p 69 (368) |+.-|-| .....+. .+.+.. ++..+ ......+...-+-+. ....++.+..+|.... +|...- T Consensus 1 ~~~~rPk~~p~~p~~~~~arrr~L--taAsa-~l~~~~~~~~kt~~~----~~~~WQ~eAW~~~d~vpELry~vgW~~~a 73 (646) T protein:vir:10 1 MALLKPKSAPPEPFGAEVARRIAL--AGATA-QVDLGASSSWKTWKF----GNKDWQTEGWRLYDIIPEHHFLAGRIGDS 73 (646) T ss_pred CcccCCCCCCCCcccccccchhhh--hhccc-cccCCCcceeecCCC----cchhhhHHHHHHHhhhhhHhhHhhhhhhh Confidence 7654432 1110000 000000 00000 000011101111111 1223333333332211 111111 Q ss_pred ccHHHHHHHHHhcccccchhhhccchHHhhccCCC----CcCHHHHHHHHHhHhhhCCeeEEEE---ecCCcceEEEEEe Q lcl|Aclame:pro 70 MPWDGLARSFRAAAHHSSAVYVKRNILVSTFIPHP----LLSRATFERLVLDWQVFGNAYLERR---ENVLGGTIRLDTP 142 (368) Q Consensus 70 ~~~~~l~~~~r~~~~~~~~~~~~~~~~l~~~~~n~----~~~~~~~~~~~~~~ll~Gnay~~i~---r~~~G~~~~L~~l 142 (368) +++..| ...+.+ +.|...-.-..........++ ....+.++.+..++-+-|.+|+... ....+---..+++ T Consensus 74 ~SR~rL-~aseid-dtG~~tg~v~~~~v~~iv~~~~Gg~~gQ~qlLkr~~~~ltV~GE~wiv~~~~~~~~~~~~~~W~vv 151 (646) T protein:vir:10 74 VAQARL-YVTEVD-DTGEETGEVQDERIKRLAAVPLGTGSQRDDNLRLAGLDLAVGGECWIVGEGAATSPEAAEGSWFVV 151 (646) T ss_pred hceeee-eeeeec-CCCCCcCccchHHHHHHhhhhccchhhHHHHHHHHHhheecccceEEeeccccCCCCCCccceeee Confidence 111000 011122 111110000011122222222 2334778999999999999998641 1111112234555 Q ss_pred cccccccccCCCeeEEEeC----CceEEEEcCccEEEec--CCCCcCCccccchhhHHHHHHHHHHHHHHHHHHHHhccC Q lcl|Aclame:pro 143 LAKYVRRGLDLNTYFFVQN----WQQPYTFAAGSVFHLQ--EPDINQEVYGLPEYLSALNATWLNESATLFRRRYYKNGS 216 (368) Q Consensus 143 ~p~~v~~~~~~~~~~~~~~----~~~~~~~~~~dviH~r--~~~~~~~~~G~spi~~a~~~i~~~~~a~~~~~~~f~ng~ 216 (368) ....|.. .++.+-.... +++.+.....|++ || .++|..-.+--||+.++...+.-..-..+...+--+.-. T Consensus 152 t~~Ev~~--tg~~~~i~~p~~~~g~~~v~~~~~d~l-vRiW~P~Prr~~epDSpvra~l~~l~Ei~~lt~~I~aaakSRL 228 (646) T protein:vir:10 152 TGSAISR--TGDEIAVRRPQQRGGSKLVLVDGQDIL-IRCWRPHPNDTDQADSFTRSAIVPLREIELLTKREFAELDSRL 228 (646) T ss_pred cHHHhcc--CCCeeeeecCccCCCCCcceecCCceE-EEEecCCcccccCCcchhHHHHHHHHHHHHhhhHhHHHHHHHH Confidence 5555532 3445443332 2334455556663 35 566777788999999999999888888888877777777 Q ss_pred CCceeEEeCCCC------ccHHHHHHHHHHHHH----h---ccccccccccccccCccccc--cccccccch-hhHHHHH Q lcl|Aclame:pro 217 HAGFILYMTDAA------QKQEDVDTLREAMKS----A---KGPGNFRNLFMYAPNGKKDG--IQLLPVSEV-AAKDEFW 280 (368) Q Consensus 217 ~p~gil~~~~~~------l~~e~~~~~k~~~~~----~---~g~~n~~~~~~l~~~g~~~g--~~~~pl~~~-~~d~qf~ 280 (368) +-.|||.+|+.. -++...+.|.+.|-+ . .+..-+-.++++...++-.+ -+++.+.+. .-+.--+ T Consensus 229 ~GnGvLfvP~e~s~p~~~~~~a~~~~l~~~l~qaa~tAi~De~S~aA~vPiia~~P~E~i~~~~~ik~l~f~~eite~ai 308 (646) T protein:vir:10 229 TGAGIMFLPEGVDFPRGEEDPAGLAGFMAYLQRAAAASMADQSRASAMVPIMATIPNEMMEHLDKIKPLTFWSELSAEIT 308 (646) T ss_pred hcCceeeeccccccCCCCCCCcchhHHHHHHHHHHHhhhcCCCCccceeeeEEeeChHHHhhhhcceeeccCchhhHHHh Confidence 788888776421 122223344444422 1 12333444555544442100 133444443 3345578 Q ss_pred HHHHHHHHHHHHHhCCChHHh-cccccccccccCHHHHHHHHHHHHHHHHHHHHHH-HHhh-c-------Cc-----ceE Q lcl|Aclame:pro 281 NIKNVTRDDQLAAHRVPPQLM-GIIPNNTGGFGDVEKAAMVFARNEVKPLQDRLLA-INDW-I-------GD-----EVV 345 (368) Q Consensus 281 e~~~~~~~~Ia~~fgVPp~~l-g~~~~~~~~~sn~e~~~~~f~~~tl~P~~~~ie~-l~~~-l-------~~-----~~~ 345 (368) .+|+-.+..||...-|||..| |+.. .+-|.+ =|....-++ .|.|.+..|.+ |.+. | |- +.+ T Consensus 309 ktR~daI~RlA~glDIppE~LLGlgd-~NHWtA--WqI~de~vr-HI~P~l~~ic~AlT~~~Lrp~Le~eGi~dp~kyvv 384 (646) T protein:vir:10 309 PMKDKAIARLASSAEIPGEVLTGIGD-ANHWTA--WLISDEGIR-WIRGYLGLIADALTRGFLRRALESMGVTNPERYAF 384 (646) T ss_pred hhHHHHHHHHHhccCCchhheeeccc-cceeee--eeeccccch-hhhhHHHHHHHHHHhhHHHHHHHHcCCCChhHeEE Confidence 999999999999999999875 7653 333322 233333445 58888888753 4332 2 21 246 Q ss_pred eechhhhhcC-Chhhhh-hhhhhcC Q lcl|Aclame:pro 346 RFAPYALGGH-DQPAAA-PGGQRSA 368 (368) Q Consensus 346 ~F~~~~Llr~-D~~~ra-~~~~~~~ 368 (368) -||.+.|..- |....| +..+|.| T Consensus 385 W~DaS~Lt~~pd~~deA~qa~drGA 409 (646) T protein:vir:10 385 AFDTSTLASKPNRLDEAIQLHERNL 409 (646) T ss_pred eecCcccccCCCCcHHHHHHHHcCC Confidence 7998888543 333332 2455555 No 164 >protein:vir:5839 Length: 533 # NCBI annotation: similar to portal vertex protein of head # Family: family:all:1036 # MgeID: mge:123 # MgeName: RM 378 # Cross-refs: genbank:acc:NP_835625;genbank:gi:30044028 Probab=91.87 E-value=0.014 Score=30.77 Aligned_cols=350 Identities=13% Similarity=0.085 Sum_probs=136.1 Q ss_pred CCcCCCCccccccccccccccCCC-----------c-chhhc-cccCceEEEECCCceeccChHHHHHHHHHHhccchh- Q lcl|Aclame:pro 1 MSRNKTRRAARAASAHVRTANTDA-----------P-TEHHT-DRAAQAEVFSFGDPVEVLDRRELLDYVECMRMGQWY- 66 (368) Q Consensus 1 m~~~k~~~~~~~~~~~~~~~~~~~-----------~-~~~~~-~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~- 66 (368) |.++++.............+.+-+ + +.... ..++..+.| +|.- +-+...+.+ ..+ +.+ T Consensus 4 ~~~w~~~de~~~~~~~~~~~~~~~~p~~~dG~s~i~~~~~~~~~~~~~~~~~-~gg~--~~n~~eLI~---~YR--~ma~ 75 (533) T protein:vir:58 4 LEKYKKLNEAVNFTNFLSPMYGMGAPHGAGGSSMIPINMYHPFATAGYASRF-YGGI--EFNRFFLYD---MYD--RMDY 75 (533) T ss_pred cchhhhhhHHHHHHHhhchhhcccCccCCCCCccccCCCCcchhhhhhhhhh-hccc--cccHHHHHH---HHH--Hhhc Confidence 222222111111111110000000 0 00000 001111112 1110 001111111 001 000 Q ss_pred cccccHHHHHHHHHhcccccchhhhccchHHhhccCCC-----------CcCH-HHHHHHHHhHhhhCCeeEEEEec-CC Q lcl|Aclame:pro 67 EPPMPWDGLARSFRAAAHHSSAVYVKRNILVSTFIPHP-----------LLSR-ATFERLVLDWQVFGNAYLERREN-VL 133 (368) Q Consensus 67 ~~p~~~~~l~~~~r~~~~~~~~~~~~~~~~l~~~~~n~-----------~~~~-~~~~~~~~~~ll~Gnay~~i~r~-~~ 133 (368) ..|-.-.++..+.+-.. .....+...-+....-. .+.+ .--..++..|+..|..|..++-+ .. T Consensus 76 ~~pEVd~AideIvneai----v~d~~~~pV~v~l~~~e~s~~iK~kI~~lldf~~~~~~~fR~WYVDGriy~Hkiik~~k 151 (533) T protein:vir:58 76 TDPLISTVLDIIADECT----IPNENGNIVDVVTKDIELAKAILSYLDYVINIEKNAYPIIRNMIKYGDMFLHILEKGSD 151 (533) T ss_pred cCcchhhHHHhhhceee----EecCCCceeEeecccccccHHHHHHHHHHhcchhhhhHHHHhhhhcceeEEEeccCCcc Confidence 01111111222211100 00000000000000000 0000 11234677899999999998643 44 Q ss_pred cceEEEEEecccccccccCC---CeeEEEe-------CCceEEEEcCccEEEecCC-CCcCCccccchhhHHHHHHHHHH Q lcl|Aclame:pro 134 GGTIRLDTPLAKYVRRGLDL---NTYFFVQ-------NWQQPYTFAAGSVFHLQEP-DINQEVYGLPEYLSALNATWLNE 202 (368) Q Consensus 134 G~~~~L~~l~p~~v~~~~~~---~~~~~~~-------~~~~~~~~~~~dviH~r~~-~~~~~~~G~spi~~a~~~i~~~~ 202 (368) +-+.+|..|+|.+++..+.. ..||.+. .+.....++.+.|+|+..- ...++-+++|-+..|...+.... T Consensus 152 ~GI~elr~lDPr~i~~vr~~~t~~eyyvy~~~~~~~~s~~~~~kI~~daI~y~~SGl~d~~~~~iisyLhkAiKp~NQLk 231 (533) T protein:vir:58 152 GTIEKFQVVSPYIFSKRYNPETDTWYYVITDVYRNVVSGYFNEDIPEEDVIHFSHKIDTNFFPYGRSYLESARAIWNQLR 231 (533) T ss_pred cchhhheecCCeeeEEEEeeccceEEEeecccccccccCccccccchhheeeeeeccccCCCCceehhhhHHHHHHHHHH Confidence 56889999999999765543 2344443 2234467888999999732 22356789999998866555544 Q ss_pred HHHHHHHHHHhccCCCceeEEeCCCCcc-HHHHHHHHHHHHHhcc---c-cccccc------c----ccc-------cCc Q lcl|Aclame:pro 203 SATLFRRRYYKNGSHAGFILYMTDAAQK-QEDVDTLREAMKSAKG---P-GNFRNL------F----MYA-------PNG 260 (368) Q Consensus 203 ~a~~~~~~~f~ng~~p~gil~~~~~~l~-~e~~~~~k~~~~~~~g---~-~n~~~~------~----~l~-------~~g 260 (368) -.++..--|=-.-+.-.-|+++.=+.|. ..+.+-++.-+..++. . .+.|.+ + ++. .|| T Consensus 232 miEDAlVIYRisRAPeRRvFYIDVGNlpk~KAeqYl~~im~k~kNklvYDa~TGev~ddrk~m~~~sMlEDyWLpRReGg 311 (533) T protein:vir:58 232 LMEDALMLYRVVRSVDRRVFYVDVGNVPPDKINEYLTNIAMQYKRDYWVRNNQNQFLGIDNYFSIESILKDYFIPRRGDR 311 (533) T ss_pred HHHHHHHHHhhcCChhheEEEEeecCCCccCHHHHHHHHHHhcccceEEeccCCeEeeccchhhhhhhHhhhcccccCCC Confidence 4444332222222222335444322222 2233334443333221 0 122222 1 111 122 Q ss_pred cccccccccccchhhHHHHHHHHHHHHHHHHHHhCCChHHhcccccccccccCHHHHHHHHHHHHHHHHHHHHHH-HHhh Q lcl|Aclame:pro 261 KKDGIQLLPVSEVAAKDEFWNIKNVTRDDQLAAHRVPPQLMGIIPNNTGGFGDVEKAAMVFARNEVKPLQDRLLA-INDW 339 (368) Q Consensus 261 ~~~g~~~~pl~~~~~d~qf~e~~~~~~~~Ia~~fgVPp~~lg~~~~~~~~~sn~e~~~~~f~~~tl~P~~~~ie~-l~~~ 339 (368) .|.+++-|.- .+ +.-++--++-...+-++++||...++...+. +-.+.+.-.-..|-+. |.-+..+|.+ +.+. T Consensus 312 --rgTEI~TLpG-g~-lgemeDV~YF~kkLy~ALnVP~sRl~~e~~f-gr~~eItRDEiKF~KF-I~rLR~rF~~ll~~q 385 (533) T protein:vir:58 312 --RAVEIDILQG-SK-VDLAEDVEYMLNRLISALKVPKAFIGYEGDV-NAKNTLATQDIKFNNT-IKRIQGFFVEELERM 385 (533) T ss_pred --ccceeeecCC-CC-CCcHHHHHHHHHHHHHHhCCCeeecCCCCCC-ccchhhhHHHHHHHHH-HHHHHHHHHHHHhcc Confidence 2344444431 12 3344555567788999999999999764321 2222232222334433 5556666665 3333 Q ss_pred cC------cc--eEeechhh----hhcCC-hhhhhhhhhhcC Q lcl|Aclame:pro 340 IG------DE--VVRFAPYA----LGGHD-QPAAAPGGQRSA 368 (368) Q Consensus 340 l~------~~--~~~F~~~~----Llr~D-~~~ra~~~~~~~ 368 (368) |- ++ .+.|..+. |.... ...|....+... T Consensus 386 Lilk~iit~eew~~~f~~Dn~f~ElKe~Eil~~Ri~~l~~~d 427 (533) T protein:vir:58 386 VRMNKEFADQDFRLVMNRSNSIVEGERFAVIEQRIGIAERLK 427 (533) T ss_pred cccccCcchhheeeeeeccchHHHHHHHHHHHHHHHHHHHhc Confidence 31 11 12232221 11110 011222222222 No 165 >protein:vir:79043 Length: 479 # NCBI annotation: putative portal protein # Family: family:all:125 # MgeID: mge:1861 # MgeName: phiC2 # Cross-refs: genbank:acc:YP_001110721;genbank:gi:134287338;genbank:GeneID:4955217 Probab=91.87 E-value=0.014 Score=30.77 Aligned_cols=320 Identities=11% Similarity=0.054 Sum_probs=117.9 Q ss_pred CCcCCCCccccccccccccccCCCcchhhccccCceEEEECCCc-eec-cCh-HHHHHHHHHHhccchhcccccHHHHHH Q lcl|Aclame:pro 1 MSRNKTRRAARAASAHVRTANTDAPTEHHTDRAAQAEVFSFGDP-VEV-LDR-RELLDYVECMRMGQWYEPPMPWDGLAR 77 (368) Q Consensus 1 m~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~p-~~~-~~~-~~~~~~~~~~~~~~~~~~p~~~~~l~~ 77 (368) |.+.+ .++...-..--...+................-....+ -.+ ++. ..+.+-. .+-....|+.+.. T Consensus 32 ~~~~~--~~~~~~~~~yy~g~~~i~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~~Ivd~~----~~~l~g~p~~~~~--- 102 (479) T protein:vir:79 32 ILKHR--PEKYKQGEEYYYGNTDVNNKRRYYLLDGAKVDDFTKVNNKAINNYHKLLVDQK----VGYSVGNPIVFNA--- 102 (479) T ss_pred Hhhhh--HHHHHHHHHHhccCCcccccccccccccccccccccCcceeecchHHHHHHHH----HhhhhcCCceecc--- Confidence 32211 0000000000000000000000000000000000000 000 010 0011100 0111122322210 Q ss_pred HHHhcccccchhhhccchHHhhccCCCCcCHHHHHHHHHhHhhhCCeeEEEEecCCcceEEEEEecccccccccCCC--- Q lcl|Aclame:pro 78 SFRAAAHHSSAVYVKRNILVSTFIPHPLLSRATFERLVLDWQVFGNAYLERRENVLGGTIRLDTPLAKYVRRGLDLN--- 154 (368) Q Consensus 78 ~~r~~~~~~~~~~~~~~~~l~~~~~n~~~~~~~~~~~~~~~ll~Gnay~~i~r~~~G~~~~L~~l~p~~v~~~~~~~--- 154 (368) .. .+....+..+..| .-......++.+.+.+|.+|..+..+..|++ .+..++|..+.+..+.. T Consensus 103 ------~~-----~~~~~~~~~~~~n--~~~~~~~~~~~~~~~~G~~~~~v~~d~~~~~-~i~~~~p~~~~~v~d~~~~~ 168 (479) T protein:vir:79 103 ------DD-----DNLTKLLNDLLGE--EFDDTITELYLNASNKGVEWLHPYINRKGEF-KYVIIPAEEAIPIWDSKRQR 168 (479) T ss_pred ------CC-----HHHHHHHHHHHhc--CHHHHHHHHHHHHHhcCeEEEEEEeCCCCce-EEEEEccceeEEEEeCCCCC Confidence 00 0000111112222 1224456677889999999999998887764 46666776665443211 Q ss_pred -e-----eEEE-eCCce----EEEEcCccEEEecCCCC---------------------------------------cCC Q lcl|Aclame:pro 155 -T-----YFFV-QNWQQ----PYTFAAGSVFHLQEPDI---------------------------------------NQE 184 (368) Q Consensus 155 -~-----~~~~-~~~~~----~~~~~~~dviH~r~~~~---------------------------------------~~~ 184 (368) . +|.. ..+++ ...+.++.|.|++.-.. .+. T Consensus 169 ~~~~~ir~y~~~~~~~~~~~~~e~y~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vPvv~~~nn 248 (479) T protein:vir:79 169 ELVAFIRFYYIEDIDGNKIKRVEYYTENDITYFIERGNSFIQEFLYDEYGKMTDIQEGHFRINNKEQGWGKVPFIPFKNN 248 (479) T ss_pred ceEEEEEEEEEeecCCceEEEEEEEeCCcEEEEEecCCcccccccccccccccccccccccccccccCCCcccEEEecCC Confidence 0 1111 11111 11222333333321000 011 Q ss_pred ccccchhhHHHHHHHHHHHHHHHHHHHHhccCCCceeEEeCCCCccHHHHHHHHHHHHHhccccccccccccccCccccc Q lcl|Aclame:pro 185 VYGLPEYLSALNATWLNESATLFRRRYYKNGSHAGFILYMTDAAQKQEDVDTLREAMKSAKGPGNFRNLFMYAPNGKKDG 264 (368) Q Consensus 185 ~~G~spi~~a~~~i~~~~~a~~~~~~~f~ng~~p~gil~~~~~~l~~e~~~~~k~~~~~~~g~~n~~~~~~l~~~g~~~g 264 (368) -+|.|.+......+.....+..-..+.+...+.|-.+++--+....++.... + ..++.+.+..+ .+ T Consensus 249 ~~g~sd~~~v~~liDa~d~~~S~~~~~~~~~~~~~~v~~g~~~~~~~~~~~~----~-------~~~~~i~~~~~---~~ 314 (479) T protein:vir:79 249 EKCVSDLTFYKSLIDIYDNNISTLADNLDEIQEVIYVLKEYPGTSLQEFIDN----I-------RYYKSIKVDGG---GG 314 (479) T ss_pred CCCCcchhhhHHHHHHHHHHHHHHHHHHHHhhCceeeeecCCccccccchhh----h-------hhccceecCCC---Cc Confidence 2467777666666655554444455555666667666642111112221111 1 12233333222 23 Q ss_pred cccccccchhhHHHHHHHHHHHHHHHHHHhCCChHHhcccccccccccCHHHHHHHH---------------HHHHHHHH Q lcl|Aclame:pro 265 IQLLPVSEVAAKDEFWNIKNVTRDDQLAAHRVPPQLMGIIPNNTGGFGDVEKAAMVF---------------ARNEVKPL 329 (368) Q Consensus 265 ~~~~pl~~~~~d~qf~e~~~~~~~~Ia~~fgVPp~~lg~~~~~~~~~sn~e~~~~~f---------------~~~tl~P~ 329 (368) ++|... ...+..+.+..+...+.|...-++|..-.+.. +|.....+.+ +...|.-. T Consensus 315 ~~~l~~--~~~~~~~~~~~~~l~~~i~~~s~~p~~~~~~~-------gn~Sg~Ai~~~~~~l~~k~~~~~~~~~~~l~~~ 385 (479) T protein:vir:79 315 VDKLEI--NIPVEAKKELLDRLEKNIIIFGQGVNPESQNT-------GDKSGVALKFLYSLLDLKCSKTEKKFKKAIREL 385 (479) T ss_pred ceEEec--cCCHHHHHHHHHHHHHHHHHHhCccccccccc-------cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Confidence 444333 33455566777777888999999986543221 1211111212 22222222 Q ss_pred HHHHHHHHhhcC-cc----e--EeechhhhhcCChhhhhhhhhhcC Q lcl|Aclame:pro 330 QDRLLAINDWIG-DE----V--VRFAPYALGGHDQPAAAPGGQRSA 368 (368) Q Consensus 330 ~~~ie~l~~~l~-~~----~--~~F~~~~Llr~D~~~ra~~~~~~~ 368 (368) ++.+..+-...+ .. - +.|+ .-+-.|.+..|+...+.+ T Consensus 386 ~~li~~~~~~~~~~~~~~~~i~i~f~--~~~p~~~~~~a~~~~kl~ 429 (479) T protein:vir:79 386 LWFVCEYLKISGNKSYDYKTVQITFN--HSMIINEAEKIDMAAKST 429 (479) T ss_pred HHHHHHHHhccCCCccccccceEEeC--CCCCcCHHHHHHHHHHHh Confidence 222221111111 11 1 3443 222345666666666655 No 166 >protein:vir:96494 Length: 501 # NCBI annotation: portal protein # Family: family:all:125 # MgeID: mge:1620 # MgeName: 2972 # Cross-refs: genbank:acc:YP_238488;genbank:gi:66391764;genbank:GeneID:5176916 Probab=91.76 E-value=0.014 Score=30.68 Aligned_cols=325 Identities=10% Similarity=0.013 Sum_probs=122.2 Q ss_pred CCcCCCCcc-c-------cccccccccccCCCcchhhccccCceEEEECCCceeccChHHHHHHHHHHhccchhcccccH Q lcl|Aclame:pro 1 MSRNKTRRA-A-------RAASAHVRTANTDAPTEHHTDRAAQAEVFSFGDPVEVLDRRELLDYVECMRMGQWYEPPMPW 72 (368) Q Consensus 1 m~~~k~~~~-~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 72 (368) +.+-+.++. + +..+.+.-..+...... ..+..-...+-|-- +.+. ..+-....|+.+ T Consensus 48 i~~~~~~~~~r~~~~~~yY~g~~~~i~~~~~~~~~-----~~~~~ri~~n~~k~------Ivd~----~~~yl~g~p~~~ 112 (501) T protein:vir:96 48 INHHKLRQAPRIQELLDYARGENHDVLKSGRRKDN-----EMADKRAVHNYGRM------ISKF----KTGYLAGNPIRV 112 (501) T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCcccCccccCcc-----ccccceeecchHHH------HHHH----HhhhhcccCeeE Confidence 111110000 0 11111100000000000 00000000110100 1010 011112223322 Q ss_pred HHHHHHHHhcccccchhhhccchHHh-hccCCCCcCHHHHHHHHHhHhhhCCeeEEEEecCCcceEEEEEeccccccccc Q lcl|Aclame:pro 73 DGLARSFRAAAHHSSAVYVKRNILVS-TFIPHPLLSRATFERLVLDWQVFGNAYLERRENVLGGTIRLDTPLAKYVRRGL 151 (368) Q Consensus 73 ~~l~~~~r~~~~~~~~~~~~~~~~l~-~~~~n~~~~~~~~~~~~~~~ll~Gnay~~i~r~~~G~~~~L~~l~p~~v~~~~ 151 (368) .+-. ..... .....+. .+.-| .-......+..+.+.+|.||..+.++.+|++ .+..++|..+.+.. T Consensus 113 ~~~~--------~~~~~--~~~~~l~~~~~~n--~~~~~~~~~~~~~~~~G~a~~~v~~dedg~~-~i~~~~p~~~~~v~ 179 (501) T protein:vir:96 113 EYDD--------NDDNS--QNDDAIKRIGRIN--DLDSLNRTLIRDLSQTGRAYEVIYRSEYDET-RIKRLSPLETFVIY 179 (501) T ss_pred eeCC--------ccchh--HHHHHHHHHHHhc--CHHHHHHHHHHHHhhcCeEEEEEEEcCCCce-EEEEEccceeEEEE Confidence 1100 00000 0000000 11111 1124566788899999999999999888864 46667777765544 Q ss_pred CCC----e-----eEEEeC-Cce---EEEEcCcc------------------------EEEecCCCCcCCccccchhhHH Q lcl|Aclame:pro 152 DLN----T-----YFFVQN-WQQ---PYTFAAGS------------------------VFHLQEPDINQEVYGLPEYLSA 194 (368) Q Consensus 152 ~~~----~-----~~~~~~-~~~---~~~~~~~d------------------------viH~r~~~~~~~~~G~spi~~a 194 (368) +.. . ||.... .+. ...+.++. |++++. ...|.|.+... T Consensus 180 d~~~~~~~~~~v~~~~~~~~~~~~~~~~vyt~~~i~~~~~~~~~~~~~~~~~~~g~vPvv~~~n-----n~~g~sd~e~v 254 (501) T protein:vir:96 180 DNSLEDNSIAAVRYYNRGTLQSAKDVVEIYTDEHIYTLDASDDFNEISVTTHAFGTVPITEYLN-----NIDGIGDYETE 254 (501) T ss_pred cCCCCCceEEEEEEEEeecCCCcEEEEEEEcCCcEEEEeeCCCceeccccccCCCccceEEecC-----CccCCCchhhh Confidence 321 0 111111 111 11122222 333332 22577777766 Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCceeEEeCCCCccHHHHHHHHHHHHHhccccccccccccccCccccccccccccchh Q lcl|Aclame:pro 195 LNATWLNESATLFRRRYYKNGSHAGFILYMTDAAQKQEDVDTLREAMKSAKGPGNFRNLFMYAPNGKKDGIQLLPVSEVA 274 (368) Q Consensus 195 ~~~i~~~~~a~~~~~~~f~ng~~p~gil~~~~~~l~~e~~~~~k~~~~~~~g~~n~~~~~~l~~~g~~~g~~~~pl~~~~ 274 (368) ...+.....+..-..+.+...+.|-.++.-......++....++ ... .-+...... ..+.+.+.+++-++... T Consensus 255 ~~liDa~d~~~s~~~~~~~~~~~~~l~i~G~~~~~~~~~~~~~~----~~~-~~~~~~~~~--~~~~~~~~~~~~l~~~~ 327 (501) T protein:vir:96 255 LYLIDLYDSAESDTANHMSDMADAILAIYGDLALPKGMQASDMK----RTR-LMQLKPPKS--ADGKEGTVKAEYLTKSY 327 (501) T ss_pred HHHHHHHHHHHHHHHHHHHHhcCceeeeecccccCcccchhhhh----hcC-eeeeccccc--ccccccCcceeeEeccC Confidence 66666555555555555555566666664211111112222221 111 001111100 01112334444444444 Q ss_pred hHHHHHHHHHHHHHHHHHHhCCChHHhcccccccccccCHHHH----------HHHHHHHHHHHHHHHHHHHHhhcCc-- Q lcl|Aclame:pro 275 AKDEFWNIKNVTRDDQLAAHRVPPQLMGIIPNNTGGFGDVEKA----------AMVFARNEVKPLQDRLLAINDWIGD-- 342 (368) Q Consensus 275 ~d~qf~e~~~~~~~~Ia~~fgVPp~~lg~~~~~~~~~sn~e~~----------~~~f~~~tl~P~~~~ie~l~~~l~~-- 342 (368) .+..+.+..+...+.|...-++|....+...++ .++..++.. .+..+...|.-.++.+..+-...+. T Consensus 328 ~~~~~~~~~~~l~~~I~~~s~~p~~~~~~~~~n-~Sg~Al~~~~~~l~~ka~~~~~~~~~~l~~~~~li~~~~~~~~~~~ 406 (501) T protein:vir:96 328 DVSGAEAYKTRLNRDIHIFTNTPDMSDTNFSGN-TSGEALKYKLFGLDQDRVDTQSQFTKGLKRRYRLAARIGSLVNEFK 406 (501) T ss_pred CHHHHHHHHHHHHHHHHHHhCCcccCccccccc-chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc Confidence 455567777788899999999997665433221 111111100 0011122222222222111111111 Q ss_pred c------eEeechhhhhcCChhhhhhhhhhcC Q lcl|Aclame:pro 343 E------VVRFAPYALGGHDQPAAAPGGQRSA 368 (368) Q Consensus 343 ~------~~~F~~~~Llr~D~~~ra~~~~~~~ 368 (368) . -+.|+ .-+--|.+..++...+++ T Consensus 407 ~~d~~~i~i~f~--~~~p~n~~e~ad~~~kl~ 436 (501) T protein:vir:96 407 DFDESLLKITFT--PNLPKSLNEQVSILTGLG 436 (501) T ss_pred ccccccceEEeC--CCCCcCHHHHHHHHHHHh Confidence 1 14453 333345666666666666 No 167 >protein:vir:8184 Length: 474 # NCBI annotation: gp4 # Family: family:all:524 # MgeID: mge:153 # MgeName: Che9d # Cross-refs: genbank:acc:NP_817977;genbank:gi:29566411;genbank:GeneID:2700965 Probab=91.70 E-value=0.015 Score=30.64 Aligned_cols=319 Identities=10% Similarity=0.014 Sum_probs=114.4 Q ss_pred CCcCCCCcc---cc-ccccccccccCCCcchhhccccCceEEEECCCceeccChHHHHHHHHHHhccchhcccccHHHHH Q lcl|Aclame:pro 1 MSRNKTRRA---AR-AASAHVRTANTDAPTEHHTDRAAQAEVFSFGDPVEVLDRRELLDYVECMRMGQWYEPPMPWDGLA 76 (368) Q Consensus 1 m~~~k~~~~---~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~ 76 (368) ..+++.+-. ++ ..+...+-.+..+ |.. +-. +.++ . .....+++ T Consensus 27 ~~~~~~~~~~~~~Yy~G~~~~~~~~~~~-------------------p~~------~r~-~~~v-----~--nw~~~~Vd 73 (474) T protein:vir:81 27 IENLRWKNLLRTSYYENKRTIQYVGTLI-------------------PPQ------YFN-LGLV-----L--GWTGKAVD 73 (474) T ss_pred HHHHhhHHHHHHHHhccCCChhhccccc-------------------cHH------HHH-HHhh-----c--ChHHHHHH Confidence 111110000 00 0000000000000 100 000 0000 0 00011111 Q ss_pred HHHHhcccccchhhhccc-hHHhhccCCCCcCHHHHHHHHHhHhhhCCeeEEEEecCCcce-EEEEEecccccccccCCC Q lcl|Aclame:pro 77 RSFRAAAHHSSAVYVKRN-ILVSTFIPHPLLSRATFERLVLDWQVFGNAYLERRENVLGGT-IRLDTPLAKYVRRGLDLN 154 (368) Q Consensus 77 ~~~r~~~~~~~~~~~~~~-~~l~~~~~n~~~~~~~~~~~~~~~ll~Gnay~~i~r~~~G~~-~~L~~l~p~~v~~~~~~~ 154 (368) .+.+...-.|-..-...+ ..-++.....|.--.....+..+.+.+|.+|+.|..+.+|++ ..+.+++|.++....+.. T Consensus 74 ~~a~rl~~~Gf~~~d~~~~~~~l~~iw~~N~ld~~~~~~~~~al~~G~sf~~V~~~~d~~~~~~i~~~sp~~~~~~~D~~ 153 (474) T protein:vir:81 74 ALARRCNLEGFVWPDGDLDSLGGTEVVDDNHLLSEIDSAIVAAMQHGPAFLINTVGEDDEPEALIHVKDASEATGEWNRR 153 (474) T ss_pred HHHhhhcccceECCCCCccchHHHHHHHhcChhHHHHHHHHHHHhhCceeEEEecCCCCCceeEEEEeccceEEEEEeCC Confidence 111111000100000000 000111111111123445667789999999999998777775 567788888776443321 Q ss_pred e------e--EEEeCCceE---EEEcCc-------------------------cEEEecCCCCcCCccccchh----hHH Q lcl|Aclame:pro 155 T------Y--FFVQNWQQP---YTFAAG-------------------------SVFHLQEPDINQEVYGLPEY----LSA 194 (368) Q Consensus 155 ~------~--~~~~~~~~~---~~~~~~-------------------------dviH~r~~~~~~~~~G~spi----~~a 194 (368) . + +....+|+. ..|.++ .|++|.+..-.++.+|.|.| ..+ T Consensus 154 ~~~~~~al~~~~~~~~g~~~~~~ly~~~~~~~~~~~~~~~~w~~~~~~~~~gvPvV~~~n~~~~~~~~G~s~i~e~v~~l 233 (474) T protein:vir:81 154 RRGLNNLLSIIDKDKEGKVLSLALYLDNETVTAQRDKATLKWQVDRDEHVYGVPAQVLPYKPAPKRPFGQSRITKPMMGL 233 (474) T ss_pred CCcceeeeEEEEEcCCCcEEEEEEEeCCcEEEEEEcCccceeeeccCCCCCCcceEEecccccccCcCCccccchhHHHH Confidence 0 1 111111111 111122 14555433222455777754 333 Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCceeEE-eCCCCccHHHHHHHHHHHHHhccccccccccccccCc-----cccccccc Q lcl|Aclame:pro 195 LNATWLNESATLFRRRYYKNGSHAGFILY-MTDAAQKQEDVDTLREAMKSAKGPGNFRNLFMYAPNG-----KKDGIQLL 268 (368) Q Consensus 195 ~~~i~~~~~a~~~~~~~f~ng~~p~gil~-~~~~~l~~e~~~~~k~~~~~~~g~~n~~~~~~l~~~g-----~~~g~~~~ 268 (368) .+.+.-...-..-...||. .|--++. .......+++-+ -...|+...+ +++.+..+. ...+.++. T Consensus 234 ~da~~r~~~~~~~~~e~~a---~pqr~i~G~~~~~~~d~d~~-~~~~~~~~~~-----~i~~~~~d~d~~~~~~~~~~~~ 304 (474) T protein:vir:81 234 QDAGVRELARREGHMDVFS---YPEFWLLGADESALKNADGT-IKSVWEARLG-----RIKGLPDDADADIPQLARADVK 304 (474) T ss_pred HHHHHHHHHHHHHHHHHhc---chhheeecCChhhccccccc-ccchhhhhHH-----HHhcCCCccccccccccccccc Confidence 4444433333333444544 3443332 111111111111 1122332211 111111100 00123444 Q ss_pred cccchhhHHH-HHHHHHHHHHHHHHHhCCChHHhcccccccccccCHHHHH---HHHHHHHHHHHHHH----HHHHHhhc Q lcl|Aclame:pro 269 PVSEVAAKDE-FWNIKNVTRDDQLAAHRVPPQLMGIIPNNTGGFGDVEKAA---MVFARNEVKPLQDR----LLAINDWI 340 (368) Q Consensus 269 pl~~~~~d~q-f~e~~~~~~~~Ia~~fgVPp~~lg~~~~~~~~~sn~e~~~---~~f~~~tl~P~~~~----ie~l~~~l 340 (368) .+.. .+++ |++..+..+.+||..-++|++.+|+... .+-++.+... ..+... ..-..+. |+++.+.. T Consensus 305 q~~~--a~l~~~~~~l~~~~~~~a~~t~iP~~~lG~~~~--~np~SaeAi~a~~~~l~~k-ae~k~~~fg~~l~~~~rla 379 (474) T protein:vir:81 305 QFPA--ASPDAHWSDINGLAKLFAREASLPDTAVAISGL--SNPTSAESYDASQYELIAE-AEGAVDDFTPALRKAFIRA 379 (474) T ss_pred ccCC--CChhHHHHHHHHHHHHHHhhhCCCHHHhccccc--ccccHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHH Confidence 4432 2344 9999999999999999999999997532 1222222222 111111 1111111 11111110 Q ss_pred ----C--------cce----EeechhhhhcCChhhhhhhhhhcC Q lcl|Aclame:pro 341 ----G--------DEV----VRFAPYALGGHDQPAAAPGGQRSA 368 (368) Q Consensus 341 ----~--------~~~----~~F~~~~Llr~D~~~ra~~~~~~~ 368 (368) + .++ ++|. ....-...+.|+...|.+ T Consensus 380 ~~i~~~~~~~~~~~~~~~~~v~W~--d~~~~s~a~~aDa~~Kl~ 421 (474) T protein:vir:81 380 LAMKNKVAIDEIPDEWKSIDAKWR--DPRYLSKSAQADAGMKQL 421 (474) T ss_pred HHHhCCCCccccchhhccceeEec--CCCccCHHHHHHHHHHHH Confidence 1 111 2231 111223344455554444 No 168 >protein:vir:4898 Length: 502 # NCBI annotation: gp502 # Family: family:all:125 # MgeID: mge:107 # MgeName: Sfi11 # Cross-refs: genbank:acc:NP_056676;genbank:gi:9635011;genbank:GeneID:1262662 Probab=91.30 E-value=0.017 Score=30.35 Aligned_cols=329 Identities=12% Similarity=0.035 Sum_probs=125.3 Q ss_pred CCcCCCCcccc--------ccccccccccCCCcchhhccccCceEEEECCCceeccChHHHHHHHHHHhccchhcccccH Q lcl|Aclame:pro 1 MSRNKTRRAAR--------AASAHVRTANTDAPTEHHTDRAAQAEVFSFGDPVEVLDRRELLDYVECMRMGQWYEPPMPW 72 (368) Q Consensus 1 m~~~k~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 72 (368) |.+-+.+...| ..+.+.-...... ........-. +++... ++-=...+-+...|+.+ T Consensus 49 i~~h~~~~~~rl~~l~~yY~g~~~~i~~~~~~-----~~~~~~~~ki-------~~n~~k---~Ivd~~~~yl~g~p~~~ 113 (502) T protein:vir:48 49 INHHKLRQAPRIQELLDYARGENHDVLKSGRR-----KDNEMADKRA-------VHNYGR---MISKFKTGYLAGNPIRV 113 (502) T ss_pred HHHHHHHHHHHHHHHHHHhcCCCccccccccc-----ccccccccee-------ecchHH---HHHHHHhhhhcccCeeE Confidence 22111111100 0000000000000 0000000000 111110 00000012122233322 Q ss_pred HHHHHHHHhcccccchhhhccchHHh-hccCCCCcCHHHHHHHHHhHhhhCCeeEEEEecCCcceEEEEEeccccccccc Q lcl|Aclame:pro 73 DGLARSFRAAAHHSSAVYVKRNILVS-TFIPHPLLSRATFERLVLDWQVFGNAYLERRENVLGGTIRLDTPLAKYVRRGL 151 (368) Q Consensus 73 ~~l~~~~r~~~~~~~~~~~~~~~~l~-~~~~n~~~~~~~~~~~~~~~ll~Gnay~~i~r~~~G~~~~L~~l~p~~v~~~~ 151 (368) ..-. ... .......+. .+.-| .-......+..+++.+|.||..+.++.+|++ .+..++|..+.+.. T Consensus 114 ~~~d--------~~~--~~~~~~~l~~~~~~N--~~~~~~~~~~~~~~~~G~a~~~v~~dedg~~-~i~~~~p~~~~~vy 180 (502) T protein:vir:48 114 EYDD--------NED--NSQNDDAIKRIGRIN--DIDTHNRNLIRDLSQTGRAYEVIYRSEYDET-RIKRLSPLETFVIY 180 (502) T ss_pred ecCC--------ccc--hhHHHHHHHHHHhhc--CHhHHHHHHHHHHhhcCeEEEEEEeCCCCce-EEEEEcccceEEEE Confidence 1100 000 000000011 01111 1224566788899999999999999888864 46667777665443 Q ss_pred CC----Ce-----eEEEeC-Cce---EEEEcCccEEEecCC----------CC---------cCCccccchhhHHHHHHH Q lcl|Aclame:pro 152 DL----NT-----YFFVQN-WQQ---PYTFAAGSVFHLQEP----------DI---------NQEVYGLPEYLSALNATW 199 (368) Q Consensus 152 ~~----~~-----~~~~~~-~~~---~~~~~~~dviH~r~~----------~~---------~~~~~G~spi~~a~~~i~ 199 (368) +. +. ||.... ++. ...+.++.|+++..- ++ .+...|+|.+......|. T Consensus 181 dd~~~~~~~~~ir~~~~~~~~~~~~~~~iyt~~~i~~~~~~~~~~~~~~~~~~~g~vPvv~~~nn~~g~sd~e~v~~liD 260 (502) T protein:vir:48 181 DNSLEDNSIAAVRYYNRGTLQNAKDVVEIYTNQHIYTLDASDSFNEISVTPHAFGTVPITEFLNNADGIGDYETELYLID 260 (502) T ss_pred cCCCCCceEEEEEEEEEeecCCcEEEEEEEeCCeEEEEEeCCceeeccceecCCCccceEEecCCCCCCCchhhhHHHHH Confidence 21 10 111111 111 112223322222110 00 012357787877666666 Q ss_pred HHHHHHHHHHHHHhccCCCceeEEeCCCCccHHHHHHHHHHHHHhccccccccccccccCccccccccccccchhhHHHH Q lcl|Aclame:pro 200 LNESATLFRRRYYKNGSHAGFILYMTDAAQKQEDVDTLREAMKSAKGPGNFRNLFMYAPNGKKDGIQLLPVSEVAAKDEF 279 (368) Q Consensus 200 ~~~~a~~~~~~~f~ng~~p~gil~~~~~~l~~e~~~~~k~~~~~~~g~~n~~~~~~l~~~g~~~g~~~~pl~~~~~d~qf 279 (368) ....+..-..+.+.-.+.|-.+++-......++....++... .-+..... ...|...+.+++.++....+..+ T Consensus 261 a~d~~~S~~~~~~~~~~~~~lv~~g~~~~~~~~~~~~~~~~~-----~~~~~~~~--~~~~~~~~~d~~~l~~~~~~~~~ 333 (502) T protein:vir:48 261 LYDSAESDTANHMSDMADAILAIYGDLALPQGMQASDMKRTR-----LMQLKPPK--SADGKEGTVKAEYLTKSYDVSGA 333 (502) T ss_pred HHHHHHHHHHHHHHHhcCceeeeecCcccccccchhhhhhcc-----eeeccccc--cccccccCcceeEeeecCCHHHH Confidence 666566555666666666766664221111222222222110 00000000 01111233444445444444455 Q ss_pred HHHHHHHHHHHHHHhCCChHHhcccccccccccCHHHHHH-------------HHHHHHHHHHHHHHHHHHhhcCc---- Q lcl|Aclame:pro 280 WNIKNVTRDDQLAAHRVPPQLMGIIPNNTGGFGDVEKAAM-------------VFARNEVKPLQDRLLAINDWIGD---- 342 (368) Q Consensus 280 ~e~~~~~~~~Ia~~fgVPp~~lg~~~~~~~~~sn~e~~~~-------------~f~~~tl~P~~~~ie~l~~~l~~---- 342 (368) ....+...++|+..-++|+...+...++ . +.++... ..+...|.-.++.+.++-...+. T Consensus 334 ~~~~~~L~~~I~~~s~~p~~~~~~~~~n-~---Sg~Alk~~~~~l~~k~~~~~~~~~~~l~~~~~li~~~~~~~~~~~~~ 409 (502) T protein:vir:48 334 EAYKTRLNKDIHVFTNTPDMSDNHFSGN-A---SGEALKYKLFGLDQDRVDTQSQFTQGLKRRYRLAARIGSLVNEFKDF 409 (502) T ss_pred HHHHHHHHHHHHHHhCCCCcCccccccC-c---hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccc Confidence 6667888899999999998665432221 1 1111111 11222222222222211111111 Q ss_pred c--eEeechhhhhcCChhhhhhhhhhcC Q lcl|Aclame:pro 343 E--VVRFAPYALGGHDQPAAAPGGQRSA 368 (368) Q Consensus 343 ~--~~~F~~~~Llr~D~~~ra~~~~~~~ 368 (368) + -+++.+..-+--|.+..|+...+++ T Consensus 410 d~~~i~i~f~~~~p~d~~e~a~~~~kl~ 437 (502) T protein:vir:48 410 DESRLKITFTPNLPKSLYEQVSILNDLG 437 (502) T ss_pred ccccceEEeCCCCCcCHHHHHHHHHHHh Confidence 1 1222223333456666777666666 No 169 >protein:vir:97336 Length: 492 # NCBI annotation: ORF006 # Family: family:all:125 # MgeID: mge:1666 # MgeName: 52A # Cross-refs: genbank:acc:YP_240606;genbank:gi:66396273;genbank:GeneID:5133692 Probab=90.80 E-value=0.019 Score=30.02 Aligned_cols=318 Identities=8% Similarity=0.033 Sum_probs=122.3 Q ss_pred CCcCCCCccccccccccccccCCCcchh-hccccCceEEEECCCceeccChHHHHHHHHHHhccchhcccccHHHHHHHH Q lcl|Aclame:pro 1 MSRNKTRRAARAASAHVRTANTDAPTEH-HTDRAAQAEVFSFGDPVEVLDRRELLDYVECMRMGQWYEPPMPWDGLARSF 79 (368) Q Consensus 1 m~~~k~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~ 79 (368) +++.+.+.++...-..-=....++.... ................. +.+.... ++.. ..+-....|+.+.. T Consensus 53 i~~~~~~~~r~~~l~~YY~g~~~i~~~~~~~~~~~~~~~~~~~~ri-~~n~~k~--Ivd~-~~~yl~g~p~~~~~----- 123 (492) T protein:vir:97 53 IKQHLEKLPEISIGQEYYEQRPDIVKEPKPVDATGAVDPLKPDDRM-ITNFHAN--LVDQ-KVSYIVGKPIAFKH----- 123 (492) T ss_pred HHHHHHHHHHHHHHHHHhcccCcccccccccccccccccccccccc-ccchHHH--HHHH-HhhhhcccCceecc----- Confidence 1111111111000000000000000000 00000000000000000 0110000 0000 01112222322110 Q ss_pred HhcccccchhhhccchHHhhccCCCCcCHHHHHHHHHhHhhhCCeeEEEEecCCcceEEEEEecccccccccCCC----e Q lcl|Aclame:pro 80 RAAAHHSSAVYVKRNILVSTFIPHPLLSRATFERLVLDWQVFGNAYLERRENVLGGTIRLDTPLAKYVRRGLDLN----T 155 (368) Q Consensus 80 r~~~~~~~~~~~~~~~~l~~~~~n~~~~~~~~~~~~~~~ll~Gnay~~i~r~~~G~~~~L~~l~p~~v~~~~~~~----~ 155 (368) .. .+....+..+..|. .......+..+.+.+|.||..+..+.+|++ .+..++|..+.+..+.. . T Consensus 124 ----~d-----~~~~~~l~~~~~n~--~~~~~~~~~~~~~~~G~a~~~v~~d~dg~~-~~~~~~p~~~~~i~d~~~~~~~ 191 (492) T protein:vir:97 124 ----TD-----DEVVKRIDEVLGNR--FDDKLHSVLTGASNKGIEWLHPYLDEEGEF-KLFRVPAEQGIPIWTDKEHEEL 191 (492) T ss_pred ----Cc-----hHHHHHHHHHHhcc--HHHHHHHHHHHHhhcCeEEEEEEecCCCce-EEEEEcccceEEEEcCCCCCce Confidence 00 00011111122232 123445577889999999999999888874 56677887775544321 1 Q ss_pred -----eEEEeCCceEEEEcCccE-----------------------------------EEecCCCCcCCccccchhhHHH Q lcl|Aclame:pro 156 -----YFFVQNWQQPYTFAAGSV-----------------------------------FHLQEPDINQEVYGLPEYLSAL 195 (368) Q Consensus 156 -----~~~~~~~~~~~~~~~~dv-----------------------------------iH~r~~~~~~~~~G~spi~~a~ 195 (368) ||..........+.++.+ +++++ .-.|.|-+.... T Consensus 192 ~~~vr~~~~~~~~~~~~y~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~vPvv~~~n-----n~~g~sd~e~v~ 266 (492) T protein:vir:97 192 EAFIRMYKLENETKVEYWDKVTVNYYVYENGSLIPDYSNNLENSKTHFSTGSWGKIPFIPFKN-----NDLEISDIFMYK 266 (492) T ss_pred EEEEEEEeeccceeEEEEecCeEEEEEEecCeeeecccccccccccccccCCCCCcceEEecC-----CCCCCCchHhHH Confidence 111111111122222222 22221 124777777666 Q ss_pred HHHHHHHHHHHHHHHHHhccCCCceeEEeCCCCccHHHHHHHHHHHHHhccccccccccccccCccccccccccccchhh Q lcl|Aclame:pro 196 NATWLNESATLFRRRYYKNGSHAGFILYMTDAAQKQEDVDTLREAMKSAKGPGNFRNLFMYAPNGKKDGIQLLPVSEVAA 275 (368) Q Consensus 196 ~~i~~~~~a~~~~~~~f~ng~~p~gil~~~~~~l~~e~~~~~k~~~~~~~g~~n~~~~~~l~~~g~~~g~~~~pl~~~~~ 275 (368) ..+.....+..-..+.+...+.|-.+++ +. +.+.....+..+.. .+.+.+.. +.+++| +..... T Consensus 267 ~liDa~d~~~S~~~~~~~~~~~~~l~~~--g~--~~~~~~~~~~~~~~-------~~~~~~~~---~~~~~~--l~~~~~ 330 (492) T protein:vir:97 267 TLIDAYNRRLSDLSNTFKDSNELTYVLK--NY--DDQELPEFKRLLRY-------YGAIKVSD---NGGVDT--IQVEVP 330 (492) T ss_pred HHHHHHHHHHHHHHHHHHHhccceeeee--cC--CcccchhHHHHHhh-------ccceecCC---CCccee--EeccCC Confidence 6665555555555555565666766654 32 22222222222221 11222322 223444 333334 Q ss_pred HHHHHHHHHHHHHHHHHHhCCChHHhcccccccccccCHHHHHHHHHHHHHHHHHHHHH--------HH----HhhcCc- Q lcl|Aclame:pro 276 KDEFWNIKNVTRDDQLAAHRVPPQLMGIIPNNTGGFGDVEKAAMVFARNEVKPLQDRLL--------AI----NDWIGD- 342 (368) Q Consensus 276 d~qf~e~~~~~~~~Ia~~fgVPp~~lg~~~~~~~~~sn~e~~~~~f~~~tl~P~~~~ie--------~l----~~~l~~- 342 (368) +..+.+..+...+.|+..-++|....+... +|.......+....+.-.+...+ ++ ...++. T Consensus 331 ~~~~~~~~~~L~~~I~~~s~~p~~~~~~~~------~n~Sg~Al~~~~~~l~~ka~~~~~~f~~~l~~~~~li~~~~~~~ 404 (492) T protein:vir:97 331 VENSKKYLDELYQKIMLFGQAVDFSSDKFG------SAPSGVALEFLYTNLNLKADKLARKAKVAIQELLWFVFEHFDIK 404 (492) T ss_pred HHHHHHHHHHHHHHHHHHhCCCCCCccccc------cCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC Confidence 566777788888999999999965443221 12222223232222222222211 11 111221 Q ss_pred -c--e--EeechhhhhcCChhhhhhhhhhcC Q lcl|Aclame:pro 343 -E--V--VRFAPYALGGHDQPAAAPGGQRSA 368 (368) Q Consensus 343 -~--~--~~F~~~~Llr~D~~~ra~~~~~~~ 368 (368) + - +.|+. -+--|.+..++...+.+ T Consensus 405 ~~~~~i~v~f~~--~~p~~~~e~a~~~~kl~ 433 (492) T protein:vir:97 405 GEHKDVDISFNY--NKVANTELQVQTAQQSM 433 (492) T ss_pred cccceeeEEecC--CCCCCHHHHHHHHHHHh Confidence 1 1 44533 22245666666666666 No 170 >protein:vir:38 Length: 496 # NCBI annotation: putative portal protein # Family: family:all:898 # MgeID: mge:2 # MgeName: A118 # Cross-refs: genbank:acc:NP_463464;swissprot:trembl:q9t1c0;genbank:gi:16798786;uniprot:Q9T1C0;genbank:GeneID:922383 Probab=89.93 E-value=0.024 Score=29.50 Aligned_cols=331 Identities=11% Similarity=0.062 Sum_probs=118.1 Q ss_pred CCcCCCC-----cc---------ccccccccccccCCCcchhhccccCceEEEECCCc----eeccCh-HHHHHHHHHHh Q lcl|Aclame:pro 1 MSRNKTR-----RA---------ARAASAHVRTANTDAPTEHHTDRAAQAEVFSFGDP----VEVLDR-RELLDYVECMR 61 (368) Q Consensus 1 m~~~k~~-----~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~p----~~~~~~-~~~~~~~~~~~ 61 (368) |--+|.- ++ .+... -.+.=.+..+ .... .....-+.+ .-.+.. ..+.+.. T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~-~~~yy~g~~~--~~~~----~~~~~~~~~~~~~~~~~n~~k~i~~~~---- 84 (496) T protein:vir:38 16 MGLLKALKDVKDHKKVNANDEDYKYIDM-WKRLYQGHYA--EWHN----LNYEHNGNPVNRRQLSMNLPKVTAKYM---- 84 (496) T ss_pred hccchhhHHHHhcCCCcCCHHHHHHHHH-HHHHhcCCCc--hhhc----chhccCCCccccceeecchHHHHHHHH---- Confidence 1110100 00 00000 0000000000 0000 000000110 000111 1111111 Q ss_pred ccchhcccccHHHHHHHHHhcccccchhhhccchHHhh-ccCCCCcCHHHHHHHHHhHhhhCCeeEEEEecCCcceEEEE Q lcl|Aclame:pro 62 MGQWYEPPMPWDGLARSFRAAAHHSSAVYVKRNILVST-FIPHPLLSRATFERLVLDWQVFGNAYLERRENVLGGTIRLD 140 (368) Q Consensus 62 ~~~~~~~p~~~~~l~~~~r~~~~~~~~~~~~~~~~l~~-~~~n~~~~~~~~~~~~~~~ll~Gnay~~i~r~~~G~~~~L~ 140 (368) .+-+..-|+.+.. . ... ....+.. +.. +.-...+..++.+.+..|.+|+.+..|.+|++ .+. T Consensus 85 a~~l~~~p~~i~~---------~-d~~----~~e~l~~~~~~--n~f~~~~~~~~~~a~~~G~~~~~~~~D~~~~~-~i~ 147 (496) T protein:vir:38 85 SKLLFNEKVKINI---------D-DKA----AEEFVLNVLKT--NGFTKNMERYIEYGEAMGGFVIKVYHDGNKNV-KVS 147 (496) T ss_pred hhhhhCCcceEee---------C-ChH----HHHHHHHHHhc--cCHHHHHHHHHHHHhhhCcEEEEEEEcCCCcE-EEE Confidence 0111122222110 0 000 0011111 111 11224456778889999999999999887764 345 Q ss_pred Eeccccccccc-----------------CCCeeEEE----eCC------------------ceEEE-------EcCc--- Q lcl|Aclame:pro 141 TPLAKYVRRGL-----------------DLNTYFFV----QNW------------------QQPYT-------FAAG--- 171 (368) Q Consensus 141 ~l~p~~v~~~~-----------------~~~~~~~~----~~~------------------~~~~~-------~~~~--- 171 (368) .++|..+-+.. ++..|+.+ ..+ |..+. +.+. T Consensus 148 ~v~~~~~~P~~~~~~~~~~~~f~~~~~~~~~~y~~le~h~~~~~~~~I~~~~y~~~~~~~~g~~v~~~~~~~~~~~~~~~ 227 (496) T protein:vir:38 148 FATADCMYPLSNDSENVDECVIANSFHKNNKYYTLLEWNEWQGDVYTVTTELYQSDDPNELGTKVSLTLLFDDIEPVVPL 227 (496) T ss_pred EEcccceEEEEecCCcEEEEEEEEEEEeCCeEEEEEEEEEEeCceEEEEEEEEecCCccccCccccccccccccccceee Confidence 55555443211 11111100 000 00000 0000 Q ss_pred ---c---EEEecCCCC----cCCccccchhhHHHHHHHHHHHHHHHHHHHHhccCCCceeEEeCCCCccH---HHHHHHH Q lcl|Aclame:pro 172 ---S---VFHLQEPDI----NQEVYGLPEYLSALNATWLNESATLFRRRYYKNGSHAGFILYMTDAAQKQ---EDVDTLR 238 (368) Q Consensus 172 ---d---viH~r~~~~----~~~~~G~spi~~a~~~i~~~~~a~~~~~~~f~ng~~p~gil~~~~~~l~~---e~~~~~k 238 (368) + +.|++.+.+ .+..+|+|.+.-+...+.....+..-..+-|..| .+..++ +...+.. ..-... T Consensus 228 ~~~~~~~f~~~~~~~~N~~~~~~p~G~Sd~~~~~~lid~ld~~~s~~~~~~~~~-~~~i~v--~~~~l~~~~~~~g~~~- 303 (496) T protein:vir:38 228 PDFTRPTFIYIKPNIANNKNLTSPLGISVYANALDTLKTLDLMFDSYYQEFKLG-KKKVLV--PSSFVKTAVNLDGSTT- 303 (496) T ss_pred cCCCcceEEEecCCcccccccCCcCCCchHhhHHHHHHHHHHHHHHHHHHHhhc-ccceec--chHHhhccCCCCCccc- Confidence 1 234443221 1345799999888777766554444444445543 333222 2111100 000000 Q ss_pred HHHHHhccccccccccccccCccccccccccccchhhHHHHHHHHHHHHHHHHHHhCCChHHhcccccccccccCHHHHH Q lcl|Aclame:pro 239 EAMKSAKGPGNFRNLFMYAPNGKKDGIQLLPVSEVAAKDEFWNIKNVTRDDQLAAHRVPPQLMGIIPNNTGGFGDVEKAA 318 (368) Q Consensus 239 ~~~~~~~g~~n~~~~~~l~~~g~~~g~~~~pl~~~~~d~qf~e~~~~~~~~Ia~~fgVPp~~lg~~~~~~~~~sn~e~~~ 318 (368) ..+.. +-...........+.+-.++.++..-...++.+..+....+|+..-|+||..+|....+..|...+.... T Consensus 304 ~~~~~-----~~~~~~~~~~~~~~~~~~i~~~~~~i~~e~~~~~l~~~l~~i~~~~g~~~~~f~~~~~g~~tAtei~~~~ 378 (496) T protein:vir:38 304 QYFDS-----TDEAFFLYQGDQDDNGKAIKDISVEIRSTEFIESINAMLRIYAMQVGLSAGTFTFDENGLKTATEVVSEK 378 (496) T ss_pred cCCCC-----ccceEEEeecCCCcccccceeeccccCHHHHHHHHHHHHHHHHHhhCCChhhcCCCccccchHHHHHHHH Confidence 00000 0000001111111222335555544456778888889999999999999999987543222222221111 Q ss_pred H----------HHHHHHHHHHHHHHHHHHhhc----C----cceEeechhhhhcCChhhhhh--hhhhcC Q lcl|Aclame:pro 319 M----------VFARNEVKPLQDRLLAINDWI----G----DEVVRFAPYALGGHDQPAAAP--GGQRSA 368 (368) Q Consensus 319 ~----------~f~~~tl~P~~~~ie~l~~~l----~----~~~~~F~~~~Llr~D~~~ra~--~~~~~~ 368 (368) . ..++..|..+++.+.++.+.+ + ...+.|.++.-+--|..+.+. ...++| T Consensus 379 ~~l~~~~~~~~~~~~~~l~~l~~~il~~~~~~~~~~g~~~~~~~i~v~f~d~i~~d~~~~~~~~~~~~~~ 448 (496) T protein:vir:38 379 SETYQTKNSHSQLIEQGIKEMIVSILEVGKFIEAYSGEVVELDTITVDFDDSIAQDEDTTINRYTNAKNQ 448 (496) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCccceEEEeCCCCCCCHHHHHHHHHHHHhc Confidence 1 122233334333333222111 1 112333332222334444433 333334 No 171 >protein:vir:102950 Length: 471 # NCBI annotation: portal protein # Family: family:all:125 # MgeID: mge:1461 # MgeName: EJ-1 # Cross-refs: genbank:acc:NP_945279;genbank:gi:39653714;interpro:IPR006428;uniprot:Q708N3;genbank:GeneID:2672864 Probab=89.43 E-value=0.026 Score=29.24 Aligned_cols=330 Identities=9% Similarity=-0.005 Sum_probs=114.7 Q ss_pred CCcCCCCccccccccccccccCCCcchhhcc-ccCceEE-EECCCceeccChHHHHHHHH-HHh--ccchhcccccHHHH Q lcl|Aclame:pro 1 MSRNKTRRAARAASAHVRTANTDAPTEHHTD-RAAQAEV-FSFGDPVEVLDRRELLDYVE-CMR--MGQWYEPPMPWDGL 75 (368) Q Consensus 1 m~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~g~p~~~~~~~~~~~~~~-~~~--~~~~~~~p~~~~~l 75 (368) ++++. .+...-..-=...+++....... ....... .....+..-.+.+-...+.. ++. .+-....|+.+.+ T Consensus 17 ~~~~~---~~~~~~~~Yy~g~hdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~n~~~~Ivd~~~~yl~G~p~~~~~- 92 (471) T protein:vir:10 17 HGKFV---SQAAEAEKYYRNENDIKRKRKPADKKGAENEAKAEDNAFRNADNRISHNWHQLLLDQKKAYALTYPPTFDV- 92 (471) T ss_pred HHHHH---HHHHHHHHHhccccccccccchhhhhcccccccccccccccccceeccchhHHHHHhhhhhhcccCceecc- Confidence 11100 00000000000000000000000 0000000 00000000000000000110 010 1111222332210 Q ss_pred HHHHHhcccccchhhhccchHHhhccCCCCcCHHHHHHHHHhHhhhCCeeEEEEecC-CcceEEEEEecccccccccCCC Q lcl|Aclame:pro 76 ARSFRAAAHHSSAVYVKRNILVSTFIPHPLLSRATFERLVLDWQVFGNAYLERRENV-LGGTIRLDTPLAKYVRRGLDLN 154 (368) Q Consensus 76 ~~~~r~~~~~~~~~~~~~~~~l~~~~~n~~~~~~~~~~~~~~~ll~Gnay~~i~r~~-~G~~~~L~~l~p~~v~~~~~~~ 154 (368) .. .+....+..+..|. .......+..+.+.+|.+|.++.++. +|+ +.+..++|..+-+..+.. T Consensus 93 --------~~-----~~~~~~l~~~~~n~--~~~~~~~~~~~~~~~G~~~~~v~~d~~~g~-~~~~~~~p~~~~~i~d~~ 156 (471) T protein:vir:10 93 --------DD-----KKVNDMIVDVLGDD--YERISKQLCVNAGNAGIAWLHVWKDASDNS-FRYACVDSKEVIPIYSKS 156 (471) T ss_pred --------CC-----hHHHHHHHHHHhcC--HHHHHHHHHHHHhhCCeEEEEEEeeCCCCe-eEEEEEcccceEEEEcCC Confidence 00 01111111112221 12334556778899999999999885 454 567777887765443321 Q ss_pred ---------eeEEEe--CCceE----EEEcCccEEEecCCC-------------------------------Cc------ Q lcl|Aclame:pro 155 ---------TYFFVQ--NWQQP----YTFAAGSVFHLQEPD-------------------------------IN------ 182 (368) Q Consensus 155 ---------~~~~~~--~~~~~----~~~~~~dviH~r~~~-------------------------------~~------ 182 (368) .+|... .+++. ..+..+.+.|++... +. T Consensus 157 ~~~~~~~~ir~~~~~~~~~~~~~~~~~vy~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iPvv 236 (471) T protein:vir:10 157 LDKKSIGVLRVYSSIDETDGKNYTVYEYWNDKECSFYRHEKEKPLEELETFQAISLIDTMNGDRSSDNSFKHDFGLVPFI 236 (471) T ss_pred CCCceEEEEEEEEeeccCCCceeEEEEEEeCCcEEEEEecCCcccccccccccccccccccccccccccccCCCCceeEE Confidence 122211 11111 123344444433110 00 Q ss_pred ---CCccccchhhHHHHHHHHHHHHHHHHHHHHhccCCCceeEEeCCCCccHHHHHHHHHHHHHhccccccccccccccC Q lcl|Aclame:pro 183 ---QEVYGLPEYLSALNATWLNESATLFRRRYYKNGSHAGFILYMTDAAQKQEDVDTLREAMKSAKGPGNFRNLFMYAPN 259 (368) Q Consensus 183 ---~~~~G~spi~~a~~~i~~~~~a~~~~~~~f~ng~~p~gil~~~~~~l~~e~~~~~k~~~~~~~g~~n~~~~~~l~~~ 259 (368) +.-.|.|-+......+..-..+..-..+.+..-+.|-.+++ +....+ .......+.. .+.+.+... T Consensus 237 ~~~n~~~~~sd~e~v~~liDa~d~~~S~~~~~~~~~~~~~lv~~--g~~~~~--~~~~~~~~~~-------~~~i~~~~~ 305 (471) T protein:vir:10 237 PFKNNEIETNDLKPIKDLVDVYDKVFSGFVNDTDDVQEVIFVLT--NYGGQD--KQEFLEDLKR-------YKMIKMDND 305 (471) T ss_pred EeccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHhhCceeeee--cCCccc--cchhHHHhhc-------CCeEEecCC Confidence 01236566655555444444444444444444455655543 322111 1111222211 112222222 Q ss_pred ccccccccccccchhhHHHHHHHHHHHHHHHHHHhCCChHHhcccccccccccCHHHHHHHHHHHHHHHHHHH------- Q lcl|Aclame:pro 260 GKKDGIQLLPVSEVAAKDEFWNIKNVTRDDQLAAHRVPPQLMGIIPNNTGGFGDVEKAAMVFARNEVKPLQDR------- 332 (368) Q Consensus 260 g~~~g~~~~pl~~~~~d~qf~e~~~~~~~~Ia~~fgVPp~~lg~~~~~~~~~sn~e~~~~~f~~~tl~P~~~~------- 332 (368) |...+.+++-++....+..+....+...+.|...-++|..-... ++|+....+.+.-..+.-.+.. T Consensus 306 ~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~I~~~s~tp~~~~~~-------~gn~Sg~Alk~~~~~l~~k~~~~~~~~~~ 378 (471) T protein:vir:10 306 GMGDQSGVTTIAIDIPTEARNLILERTKKQIFISGQGVNPETDK-------LGNSSGVALKFLYSLLELKAGNMETQFRS 378 (471) T ss_pred CCccCccceEEeecCChHHHHHHHHHHHHHHHHHhCCcCCCccc-------ccCccHHHHHHHHHHHHHHHHHHHHHHHH Confidence 22223333334433344556677778888999999998643221 1222222222221111111111 Q ss_pred -HHH----HHhhcCc---ceEeechhhhhcCChhhhhhhhhhcC Q lcl|Aclame:pro 333 -LLA----INDWIGD---EVVRFAPYALGGHDQPAAAPGGQRSA 368 (368) Q Consensus 333 -ie~----l~~~l~~---~~~~F~~~~Llr~D~~~ra~~~~~~~ 368 (368) |++ +...++. .-+++.+...+--|.+..++-..+.+ T Consensus 379 ~l~~~~~li~~~~~~~d~~~i~i~f~~~~p~n~~e~~~~~~kl~ 422 (471) T protein:vir:10 379 GYATLVKMILKHLGLSDKLKIKQTWTRNSINNDTEMAQVVSTLA 422 (471) T ss_pred HHHHHHHHHHHHhccCCCceeEEEeCCCCCCCHHHHHHHHHHHh Confidence 111 1111221 11333333344456666666665655 No 172 >protein:vir:94101 Length: 474 # NCBI annotation: ORF007 # Family: family:all:125 # MgeID: mge:1494 # MgeName: 96 # Cross-refs: genbank:acc:YP_240229;genbank:gi:66395892;genbank:GeneID:5133270 Probab=89.27 E-value=0.027 Score=29.16 Aligned_cols=329 Identities=8% Similarity=-0.048 Sum_probs=117.0 Q ss_pred CCcCCCCcccc------cccccccc-ccCCCcchhh--ccccCceEEEECCCc-eec-cChHHHHHHHHHHhccchhccc Q lcl|Aclame:pro 1 MSRNKTRRAAR------AASAHVRT-ANTDAPTEHH--TDRAAQAEVFSFGDP-VEV-LDRRELLDYVECMRMGQWYEPP 69 (368) Q Consensus 1 m~~~k~~~~~~------~~~~~~~~-~~~~~~~~~~--~~~~~~~~~~~~g~p-~~~-~~~~~~~~~~~~~~~~~~~~~p 69 (368) |.+.+..+++. -...+.-. .-.......- .......... .+.| -.+ .+.. .++-=...+-....| T Consensus 24 i~~~~~~~~r~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ki~~n~~---~~ivd~~~~yl~g~p 99 (474) T protein:vir:94 24 IESHKDDRERMVNLYNRYKTHIDYVPIFKRRPIEEKEDFETGGNVRRL-DVSVNNKLNNSFD---SEIVDTRVGYLHGVP 99 (474) T ss_pred HHHhhhhhHHHHHHHHHHhhhcchhhhhcchhhhhhhhhhhccccccc-ccCcccccccchH---HHHHHhHhhheeccc Confidence 11111100000 00000000 0000000000 0000000000 0000 000 0000 000000011112223 Q ss_pred ccHHHHHHHHHhcccccchhhhccchHHhh-ccCCCCcCHHHHHHHHHhHhhhCCeeEEEEecCCcceEEEEEecccccc Q lcl|Aclame:pro 70 MPWDGLARSFRAAAHHSSAVYVKRNILVST-FIPHPLLSRATFERLVLDWQVFGNAYLERRENVLGGTIRLDTPLAKYVR 148 (368) Q Consensus 70 ~~~~~l~~~~r~~~~~~~~~~~~~~~~l~~-~~~n~~~~~~~~~~~~~~~ll~Gnay~~i~r~~~G~~~~L~~l~p~~v~ 148 (368) +.+.+ ..+..........+.. +..| .-......++.+.+.+|.||..+..+.+|++ .+..++|..+- T Consensus 100 v~~~~---------~~~~~~~e~~~~~l~~~~~~n--~~~~~~~~~~~~~~~~G~a~~~~~~d~~~~~-~~~~i~p~~~~ 167 (474) T protein:vir:94 100 VTYDL---------DENAEKNEKLKKFITNFAIRN--SVDDEDSEIGKMAAICGYGARLAYIDTNGDI-RIKNIDPYNVI 167 (474) T ss_pred eeEee---------CCCCcchHHHHHHHHHHHhhc--CHhHHHHHHHHHHhhcCeEEEEEEeCCCCee-EEEEEcccceE Confidence 32210 0000000000001111 1111 1123556677888999999999998888864 56667776654 Q ss_pred cccCCCe-------eEEEeC--Cce----EEEEcCcc--------------------------EEEecCCCCcCCccccc Q lcl|Aclame:pro 149 RGLDLNT-------YFFVQN--WQQ----PYTFAAGS--------------------------VFHLQEPDINQEVYGLP 189 (368) Q Consensus 149 ~~~~~~~-------~~~~~~--~~~----~~~~~~~d--------------------------viH~r~~~~~~~~~G~s 189 (368) +..+..+ +|.... ++. ...+.+.. |+|+++ ...|.| T Consensus 168 ~v~d~~~~~~~~i~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~g~vPvv~~~n-----~~~g~s 242 (474) T protein:vir:94 168 FVGDNILEPTYSLRYFYEKDDDNGTDYVYAEFYDNAYYYVFRGEGIDALQEVGRYEHLFDYNPLFGVPN-----NKEMIG 242 (474) T ss_pred EEEcCCCceEEEEEEEEEeeCCCceEEEEEEEEcCceEEEEeecCCCcccccccccCCCCccceEEecC-----CCCCCC Confidence 4332211 111111 110 01111111 334432 224666 Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHhccCCCceeEEeCCCCccHHHHHHHHHHHHHhccccccccccccccCcccccccccc Q lcl|Aclame:pro 190 EYLSALNATWLNESATLFRRRYYKNGSHAGFILYMTDAAQKQEDVDTLREAMKSAKGPGNFRNLFMYAPNGKKDGIQLLP 269 (368) Q Consensus 190 pi~~a~~~i~~~~~a~~~~~~~f~ng~~p~gil~~~~~~l~~e~~~~~k~~~~~~~g~~n~~~~~~l~~~g~~~g~~~~p 269 (368) -+......+.....+..-..+.+...+.|-.++ ++..++++....++. .+...+... +.+++| T Consensus 243 d~e~v~~liDa~d~~~S~~~~~~~~~~~~~l~i--~g~~~~~~~~~~~~~----------~~~i~~~~~---~~~~~~-- 305 (474) T protein:vir:94 243 DAEKVIHLIDAYDLTMSDASSEISQTRLAYLVL--RGMGMSEEMIQETQK----------SGAFELFDK---DMDVKY-- 305 (474) T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHhhcchhhh--ccCCCCchhhhhhhh----------cceeEecCC---CCceeE-- Confidence 666555555544444444444444444555555 344455544332221 222223222 233444 Q ss_pred ccchhhHHHHHHHHHHHHHHHHHHhCCChHHhcccccccccccCHHHH----------HHHHHHHHHHHHHHHHHHHHhh Q lcl|Aclame:pro 270 VSEVAAKDEFWNIKNVTRDDQLAAHRVPPQLMGIIPNNTGGFGDVEKA----------AMVFARNEVKPLQDRLLAINDW 339 (368) Q Consensus 270 l~~~~~d~qf~e~~~~~~~~Ia~~fgVPp~~lg~~~~~~~~~sn~e~~----------~~~f~~~tl~P~~~~ie~l~~~ 339 (368) ++....+..+.+..+...+.|...-++|....+...++ .++..+.-. .+..+...|.-.++.+..+-.. T Consensus 306 l~~~~~~~~~~~~~~~l~~~I~~~s~~p~~~~~~~~~n-~Sg~Al~~~~~~l~~k~~~~~~~~~~~l~~~~~li~~~l~~ 384 (474) T protein:vir:94 306 LTKDVNDTMIENHLDRIEKNIMRFAKSVNFNSDEFNGN-VPIIGMKLKLMALENKCMTFERKMTAMLRYQFKVILSALKR 384 (474) T ss_pred EeccCCHHHHHHHHHHHHHHHHHHhCCccccccccccc-chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh Confidence 33333455677777888899999999997654322211 111111110 0112222222222222211111 Q ss_pred cCc-----c--eEeechhhhhcCChhhhhhhhhhcC Q lcl|Aclame:pro 340 IGD-----E--VVRFAPYALGGHDQPAAAPGGQRSA 368 (368) Q Consensus 340 l~~-----~--~~~F~~~~Llr~D~~~ra~~~~~~~ 368 (368) .+. . -+++.+..-+--|.+..|+...+.+ T Consensus 385 ~~~~~~~~~~~~i~~~f~~~~p~d~~e~a~~~~kl~ 420 (474) T protein:vir:94 385 KGYNLDDDSYLNLIFKFTRNIPVNKLEESQVLINLK 420 (474) T ss_pred ccCCCCccccccceEEeCCCCCCCHHHHHHHHHHHh Confidence 111 1 1233333333345666666555555 No 173 >protein:vir:105889 Length: 474 # NCBI annotation: portal protein # Family: family:all:125 # MgeID: mge:1514 # MgeName: phiETA3 # Cross-refs: genbank:acc:YP_001004371;genbank:gi:122891826;genbank:GeneID:4712360 Probab=89.27 E-value=0.027 Score=29.16 Aligned_cols=329 Identities=8% Similarity=-0.048 Sum_probs=117.0 Q ss_pred CCcCCCCcccc------cccccccc-ccCCCcchhh--ccccCceEEEECCCc-eec-cChHHHHHHHHHHhccchhccc Q lcl|Aclame:pro 1 MSRNKTRRAAR------AASAHVRT-ANTDAPTEHH--TDRAAQAEVFSFGDP-VEV-LDRRELLDYVECMRMGQWYEPP 69 (368) Q Consensus 1 m~~~k~~~~~~------~~~~~~~~-~~~~~~~~~~--~~~~~~~~~~~~g~p-~~~-~~~~~~~~~~~~~~~~~~~~~p 69 (368) |.+.+..+++. -...+.-. .-.......- .......... .+.| -.+ .+.. .++-=...+-....| T Consensus 24 i~~~~~~~~r~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ki~~n~~---~~ivd~~~~yl~g~p 99 (474) T protein:vir:10 24 IESHKDDRERMVNLYNRYKTHIDYVPIFKRRPIEEKEDFETGGNVRRL-DVSVNNKLNNSFD---SEIVDTRVGYLHGVP 99 (474) T ss_pred HHHhhhhhHHHHHHHHHHhhhcchhhhhcchhhhhhhhhhhccccccc-ccCcccccccchH---HHHHHhHhhheeccc Confidence 11111100000 00000000 0000000000 0000000000 0000 000 0000 000000011112223 Q ss_pred ccHHHHHHHHHhcccccchhhhccchHHhh-ccCCCCcCHHHHHHHHHhHhhhCCeeEEEEecCCcceEEEEEecccccc Q lcl|Aclame:pro 70 MPWDGLARSFRAAAHHSSAVYVKRNILVST-FIPHPLLSRATFERLVLDWQVFGNAYLERRENVLGGTIRLDTPLAKYVR 148 (368) Q Consensus 70 ~~~~~l~~~~r~~~~~~~~~~~~~~~~l~~-~~~n~~~~~~~~~~~~~~~ll~Gnay~~i~r~~~G~~~~L~~l~p~~v~ 148 (368) +.+.+ ..+..........+.. +..| .-......++.+.+.+|.||..+..+.+|++ .+..++|..+- T Consensus 100 v~~~~---------~~~~~~~e~~~~~l~~~~~~n--~~~~~~~~~~~~~~~~G~a~~~~~~d~~~~~-~~~~i~p~~~~ 167 (474) T protein:vir:10 100 VTYDL---------DENAEKNEKLKKFITNFAIRN--SVDDEDSEIGKMAAICGYGARLAYIDTNGDI-RIKNIDPYNVI 167 (474) T ss_pred eeEee---------CCCCcchHHHHHHHHHHHhhc--CHhHHHHHHHHHHhhcCeEEEEEEeCCCCee-EEEEEcccceE Confidence 32210 0000000000001111 1111 1123556677888999999999998888864 56667776654 Q ss_pred cccCCCe-------eEEEeC--Cce----EEEEcCcc--------------------------EEEecCCCCcCCccccc Q lcl|Aclame:pro 149 RGLDLNT-------YFFVQN--WQQ----PYTFAAGS--------------------------VFHLQEPDINQEVYGLP 189 (368) Q Consensus 149 ~~~~~~~-------~~~~~~--~~~----~~~~~~~d--------------------------viH~r~~~~~~~~~G~s 189 (368) +..+..+ +|.... ++. ...+.+.. |+|+++ ...|.| T Consensus 168 ~v~d~~~~~~~~i~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~g~vPvv~~~n-----~~~g~s 242 (474) T protein:vir:10 168 FVGDNILEPTYSLRYFYEKDDDNGTDYVYAEFYDNAYYYVFRGEGIDALQEVGRYEHLFDYNPLFGVPN-----NKEMIG 242 (474) T ss_pred EEEcCCCceEEEEEEEEEeeCCCceEEEEEEEEcCceEEEEeecCCCcccccccccCCCCccceEEecC-----CCCCCC Confidence 4332211 111111 110 01111111 334432 224666 Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHhccCCCceeEEeCCCCccHHHHHHHHHHHHHhccccccccccccccCcccccccccc Q lcl|Aclame:pro 190 EYLSALNATWLNESATLFRRRYYKNGSHAGFILYMTDAAQKQEDVDTLREAMKSAKGPGNFRNLFMYAPNGKKDGIQLLP 269 (368) Q Consensus 190 pi~~a~~~i~~~~~a~~~~~~~f~ng~~p~gil~~~~~~l~~e~~~~~k~~~~~~~g~~n~~~~~~l~~~g~~~g~~~~p 269 (368) -+......+.....+..-..+.+...+.|-.++ ++..++++....++. .+...+... +.+++| T Consensus 243 d~e~v~~liDa~d~~~S~~~~~~~~~~~~~l~i--~g~~~~~~~~~~~~~----------~~~i~~~~~---~~~~~~-- 305 (474) T protein:vir:10 243 DAEKVIHLIDAYDLTMSDASSEISQTRLAYLVL--RGMGMSEEMIQETQK----------SGAFELFDK---DMDVKY-- 305 (474) T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHhhcchhhh--ccCCCCchhhhhhhh----------cceeEecCC---CCceeE-- Confidence 666555555544444444444444444555555 344455544332221 222223222 233444 Q ss_pred ccchhhHHHHHHHHHHHHHHHHHHhCCChHHhcccccccccccCHHHH----------HHHHHHHHHHHHHHHHHHHHhh Q lcl|Aclame:pro 270 VSEVAAKDEFWNIKNVTRDDQLAAHRVPPQLMGIIPNNTGGFGDVEKA----------AMVFARNEVKPLQDRLLAINDW 339 (368) Q Consensus 270 l~~~~~d~qf~e~~~~~~~~Ia~~fgVPp~~lg~~~~~~~~~sn~e~~----------~~~f~~~tl~P~~~~ie~l~~~ 339 (368) ++....+..+.+..+...+.|...-++|....+...++ .++..+.-. .+..+...|.-.++.+..+-.. T Consensus 306 l~~~~~~~~~~~~~~~l~~~I~~~s~~p~~~~~~~~~n-~Sg~Al~~~~~~l~~k~~~~~~~~~~~l~~~~~li~~~l~~ 384 (474) T protein:vir:10 306 LTKDVNDTMIENHLDRIEKNIMRFAKSVNFNSDEFNGN-VPIIGMKLKLMALENKCMTFERKMTAMLRYQFKVILSALKR 384 (474) T ss_pred EeccCCHHHHHHHHHHHHHHHHHHhCCccccccccccc-chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh Confidence 33333455677777888899999999997654322211 111111110 0112222222222222211111 Q ss_pred cCc-----c--eEeechhhhhcCChhhhhhhhhhcC Q lcl|Aclame:pro 340 IGD-----E--VVRFAPYALGGHDQPAAAPGGQRSA 368 (368) Q Consensus 340 l~~-----~--~~~F~~~~Llr~D~~~ra~~~~~~~ 368 (368) .+. . -+++.+..-+--|.+..|+...+.+ T Consensus 385 ~~~~~~~~~~~~i~~~f~~~~p~d~~e~a~~~~kl~ 420 (474) T protein:vir:10 385 KGYNLDDDSYLNLIFKFTRNIPVNKLEESQVLINLK 420 (474) T ss_pred ccCCCCccccccceEEeCCCCCCCHHHHHHHHHHHh Confidence 111 1 1233333333345666666555555 No 174 >protein:vir:97447 Length: 474 # NCBI annotation: ORF007 # Family: family:all:125 # MgeID: mge:1676 # MgeName: 92 # Cross-refs: genbank:acc:YP_240744;genbank:gi:66396413;genbank:GeneID:5133803 Probab=89.25 E-value=0.027 Score=29.15 Aligned_cols=316 Identities=8% Similarity=0.039 Sum_probs=113.1 Q ss_pred CCcCCCCccccccccccccccCCCcchhhccccCceEEEECCCc-ee-ccChH-HHHHHHHHHhccchhcccccHHHHHH Q lcl|Aclame:pro 1 MSRNKTRRAARAASAHVRTANTDAPTEHHTDRAAQAEVFSFGDP-VE-VLDRR-ELLDYVECMRMGQWYEPPMPWDGLAR 77 (368) Q Consensus 1 m~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~p-~~-~~~~~-~~~~~~~~~~~~~~~~~p~~~~~l~~ 77 (368) .++-+.+.++...-..-=.....+.. .............+.+ -. +++.. .+.+.. .+-....|+.+.+-. T Consensus 36 i~~~~~~~~~~~~~~~YY~g~~~i~~--~~~~~~~~~~~~~~~~~~ki~~n~~k~Ivd~~----~~~l~g~p~~~~~~d- 108 (474) T protein:vir:97 36 IDDHRKQLDKITVGQRYYDKDNDIVK--QMKKVDVHGNIDYDKPDWRITTNFHQNLVDQK----VSYVASKPVTYSCED- 108 (474) T ss_pred HHHHHHHHHHHHHHHHHhccccchhc--ccchhccccccccccCcceeecchHHHHHHHH----HhhhhcCCceeccCc- Confidence 11000000000000000000000000 0000000000000000 00 01110 011100 011122233221100 Q ss_pred HHHhcccccchhhhccchHHhhccCCCCcCHHHHHHHHHhHhhhCCeeEEEEecCCcceEEEEEecccccccccCCC--- Q lcl|Aclame:pro 78 SFRAAAHHSSAVYVKRNILVSTFIPHPLLSRATFERLVLDWQVFGNAYLERRENVLGGTIRLDTPLAKYVRRGLDLN--- 154 (368) Q Consensus 78 ~~r~~~~~~~~~~~~~~~~l~~~~~n~~~~~~~~~~~~~~~ll~Gnay~~i~r~~~G~~~~L~~l~p~~v~~~~~~~--- 154 (368) ......+..+..|. .......++.+.+.+|.+|..+..+.+|++ .+..++|..+-+..+.. T Consensus 109 -------------~~~~~~l~~~~~n~--~~~~~~e~~~~~~~~G~~~~~~~~d~~~~~-~i~~~~p~~~~~v~d~~~~~ 172 (474) T protein:vir:97 109 -------------ENVLKVIHDVLDTR--WDNKLIDILTATSNKGIDWLQVYINENGEM-KLFRVPAEQAIPIWVDKERE 172 (474) T ss_pred -------------HHHHHHHHHHHhcc--HHHHHHHHHHHHhhcCceEEEEEecCCCee-EEEEEcccceEEEEcCCCCC Confidence 00011111111221 124445677888999999999999888864 46667776665543321 Q ss_pred -e-----eEEEeCCceEEEEcCcc-----------------------------------EEEecCCCCcCCccccchhhH Q lcl|Aclame:pro 155 -T-----YFFVQNWQQPYTFAAGS-----------------------------------VFHLQEPDINQEVYGLPEYLS 193 (368) Q Consensus 155 -~-----~~~~~~~~~~~~~~~~d-----------------------------------viH~r~~~~~~~~~G~spi~~ 193 (368) . +|..........+.++. |+++++ ..+|+|-+.. T Consensus 173 ~~~~~ir~~~~~~~~~~~~yt~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~g~vPvv~~~n-----n~~g~sd~e~ 247 (474) T protein:vir:97 173 ELKSFIRYYKFNNEEKVEFWTDTTVTYYVLENGGLIPDYYYGANHVQSHFSNGNWGRVPFIAFKN-----NPEEVSDIWM 247 (474) T ss_pred ceEEEEEEEEecCeEEEEEEeCCeEEEEEEcCCccccccccCcCcccccccccCCCccceEEecC-----CcCCCCcHHH Confidence 0 11111101111122222 333332 2357777766 Q ss_pred HHHHHHHHHHHHHHHHHHHhccCCCceeEEeCCCCccHHHHHHHHHHHHHhccccccccccccccCccccccccccccch Q lcl|Aclame:pro 194 ALNATWLNESATLFRRRYYKNGSHAGFILYMTDAAQKQEDVDTLREAMKSAKGPGNFRNLFMYAPNGKKDGIQLLPVSEV 273 (368) Q Consensus 194 a~~~i~~~~~a~~~~~~~f~ng~~p~gil~~~~~~l~~e~~~~~k~~~~~~~g~~n~~~~~~l~~~g~~~g~~~~pl~~~ 273 (368) ....+.....+..-..+.+...+.|-.+++ +...++ .+.+....+ ..+++.+..+ .+++|. +.. T Consensus 248 v~~liDa~n~~~s~~~~~~~~~~~~~lv~~--g~~~~~--~~~~~~~~~-------~~~~i~~~~~---~~~~~l--~~~ 311 (474) T protein:vir:97 248 YKSIIDAIDKRLSDAQNMFDESVELIYILK--GYEGED--LEEFMRGLK-------YYKAINVDGD---GGVETI--QVE 311 (474) T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCceeeee--cCCccc--chhhhhhhh-------ccceeeccCC---CceeEE--eec Confidence 666666555444444444555556665654 332222 111222111 2233333322 234443 333 Q ss_pred hhHHHHHHHHHHHHHHHHHHhCCChHHhcccccccccccCHHHHHHHH---------------HHHHHHHHHHHHHHHHh Q lcl|Aclame:pro 274 AAKDEFWNIKNVTRDDQLAAHRVPPQLMGIIPNNTGGFGDVEKAAMVF---------------ARNEVKPLQDRLLAIND 338 (368) Q Consensus 274 ~~d~qf~e~~~~~~~~Ia~~fgVPp~~lg~~~~~~~~~sn~e~~~~~f---------------~~~tl~P~~~~ie~l~~ 338 (368) .....+.+..+.....|...-++|..-.+-.. +|.......+ +...|...++.+.++.. T Consensus 312 ~~~~~~~~~~~~l~~~I~~~s~~p~~~~~~~~------~n~Sg~Al~~~~~~l~~k~~~k~~~~~~~l~~~~~li~~~~~ 385 (474) T protein:vir:97 312 VPVSSTKEYIDLMRVYIMEFGQGVDFQTDKFG------SAPSGIALKFLYGNLDLKANKLKNKATVAIQELISFIIDFNN 385 (474) T ss_pred CCHHHHHHHHHHHHHHHHHHhCccccCccccc------cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC Confidence 34455666667778888888888853321111 1111211212 22222222222222111 Q ss_pred -hcCcc--eEeechhhhhcCChhhhhhhhhhcC Q lcl|Aclame:pro 339 -WIGDE--VVRFAPYALGGHDQPAAAPGGQRSA 368 (368) Q Consensus 339 -~l~~~--~~~F~~~~Llr~D~~~ra~~~~~~~ 368 (368) ..... -+.|+.... -|.+..|+...++. T Consensus 386 ~~~d~~~i~v~f~~~~p--~~~~e~a~~~~~~g 416 (474) T protein:vir:97 386 LKTDVKDIEISFNFNRM--MNDAEQSQIIAQSQ 416 (474) T ss_pred CCcccceeeEEeccCcc--cCHHHHHHHHHHcC Confidence 00101 145543222 24444454444433 No 175 >protein:vir:94498 Length: 474 # NCBI annotation: ORF007 # Family: family:all:125 # MgeID: mge:1508 # MgeName: 88 # Cross-refs: genbank:acc:YP_240672;genbank:gi:66396340;genbank:GeneID:5133762 Probab=89.25 E-value=0.027 Score=29.15 Aligned_cols=316 Identities=8% Similarity=0.039 Sum_probs=113.1 Q ss_pred CCcCCCCccccccccccccccCCCcchhhccccCceEEEECCCc-ee-ccChH-HHHHHHHHHhccchhcccccHHHHHH Q lcl|Aclame:pro 1 MSRNKTRRAARAASAHVRTANTDAPTEHHTDRAAQAEVFSFGDP-VE-VLDRR-ELLDYVECMRMGQWYEPPMPWDGLAR 77 (368) Q Consensus 1 m~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~p-~~-~~~~~-~~~~~~~~~~~~~~~~~p~~~~~l~~ 77 (368) .++-+.+.++...-..-=.....+.. .............+.+ -. +++.. .+.+.. .+-....|+.+.+-. T Consensus 36 i~~~~~~~~~~~~~~~YY~g~~~i~~--~~~~~~~~~~~~~~~~~~ki~~n~~k~Ivd~~----~~~l~g~p~~~~~~d- 108 (474) T protein:vir:94 36 IDDHRKQLDKITVGQRYYDKDNDIVK--QMKKVDVHGNIDYDKPDWRITTNFHQNLVDQK----VSYVASKPVTYSCED- 108 (474) T ss_pred HHHHHHHHHHHHHHHHHhccccchhc--ccchhccccccccccCcceeecchHHHHHHHH----HhhhhcCCceeccCc- Confidence 11000000000000000000000000 0000000000000000 00 01110 011100 011122233221100 Q ss_pred HHHhcccccchhhhccchHHhhccCCCCcCHHHHHHHHHhHhhhCCeeEEEEecCCcceEEEEEecccccccccCCC--- Q lcl|Aclame:pro 78 SFRAAAHHSSAVYVKRNILVSTFIPHPLLSRATFERLVLDWQVFGNAYLERRENVLGGTIRLDTPLAKYVRRGLDLN--- 154 (368) Q Consensus 78 ~~r~~~~~~~~~~~~~~~~l~~~~~n~~~~~~~~~~~~~~~ll~Gnay~~i~r~~~G~~~~L~~l~p~~v~~~~~~~--- 154 (368) ......+..+..|. .......++.+.+.+|.+|..+..+.+|++ .+..++|..+-+..+.. T Consensus 109 -------------~~~~~~l~~~~~n~--~~~~~~e~~~~~~~~G~~~~~~~~d~~~~~-~i~~~~p~~~~~v~d~~~~~ 172 (474) T protein:vir:94 109 -------------ENVLKVIHDVLDTR--WDNKLIDILTATSNKGIDWLQVYINENGEM-KLFRVPAEQAIPIWVDKERE 172 (474) T ss_pred -------------HHHHHHHHHHHhcc--HHHHHHHHHHHHhhcCceEEEEEecCCCee-EEEEEcccceEEEEcCCCCC Confidence 00011111111221 124445677888999999999999888864 46667776665543321 Q ss_pred -e-----eEEEeCCceEEEEcCcc-----------------------------------EEEecCCCCcCCccccchhhH Q lcl|Aclame:pro 155 -T-----YFFVQNWQQPYTFAAGS-----------------------------------VFHLQEPDINQEVYGLPEYLS 193 (368) Q Consensus 155 -~-----~~~~~~~~~~~~~~~~d-----------------------------------viH~r~~~~~~~~~G~spi~~ 193 (368) . +|..........+.++. |+++++ ..+|+|-+.. T Consensus 173 ~~~~~ir~~~~~~~~~~~~yt~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~g~vPvv~~~n-----n~~g~sd~e~ 247 (474) T protein:vir:94 173 ELKSFIRYYKFNNEEKVEFWTDTTVTYYVLENGGLIPDYYYGANHVQSHFSNGNWGRVPFIAFKN-----NPEEVSDIWM 247 (474) T ss_pred ceEEEEEEEEecCeEEEEEEeCCeEEEEEEcCCccccccccCcCcccccccccCCCccceEEecC-----CcCCCCcHHH Confidence 0 11111101111122222 333332 2357777766 Q ss_pred HHHHHHHHHHHHHHHHHHHhccCCCceeEEeCCCCccHHHHHHHHHHHHHhccccccccccccccCccccccccccccch Q lcl|Aclame:pro 194 ALNATWLNESATLFRRRYYKNGSHAGFILYMTDAAQKQEDVDTLREAMKSAKGPGNFRNLFMYAPNGKKDGIQLLPVSEV 273 (368) Q Consensus 194 a~~~i~~~~~a~~~~~~~f~ng~~p~gil~~~~~~l~~e~~~~~k~~~~~~~g~~n~~~~~~l~~~g~~~g~~~~pl~~~ 273 (368) ....+.....+..-..+.+...+.|-.+++ +...++ .+.+....+ ..+++.+..+ .+++|. +.. T Consensus 248 v~~liDa~n~~~s~~~~~~~~~~~~~lv~~--g~~~~~--~~~~~~~~~-------~~~~i~~~~~---~~~~~l--~~~ 311 (474) T protein:vir:94 248 YKSIIDAIDKRLSDAQNMFDESVELIYILK--GYEGED--LEEFMRGLK-------YYKAINVDGD---GGVETI--QVE 311 (474) T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCceeeee--cCCccc--chhhhhhhh-------ccceeeccCC---CceeEE--eec Confidence 666666555444444444555556665654 332222 111222111 2233333322 234443 333 Q ss_pred hhHHHHHHHHHHHHHHHHHHhCCChHHhcccccccccccCHHHHHHHH---------------HHHHHHHHHHHHHHHHh Q lcl|Aclame:pro 274 AAKDEFWNIKNVTRDDQLAAHRVPPQLMGIIPNNTGGFGDVEKAAMVF---------------ARNEVKPLQDRLLAIND 338 (368) Q Consensus 274 ~~d~qf~e~~~~~~~~Ia~~fgVPp~~lg~~~~~~~~~sn~e~~~~~f---------------~~~tl~P~~~~ie~l~~ 338 (368) .....+.+..+.....|...-++|..-.+-.. +|.......+ +...|...++.+.++.. T Consensus 312 ~~~~~~~~~~~~l~~~I~~~s~~p~~~~~~~~------~n~Sg~Al~~~~~~l~~k~~~k~~~~~~~l~~~~~li~~~~~ 385 (474) T protein:vir:94 312 VPVSSTKEYIDLMRVYIMEFGQGVDFQTDKFG------SAPSGIALKFLYGNLDLKANKLKNKATVAIQELISFIIDFNN 385 (474) T ss_pred CCHHHHHHHHHHHHHHHHHHhCccccCccccc------cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC Confidence 34455666667778888888888853321111 1111211212 22222222222222111 Q ss_pred -hcCcc--eEeechhhhhcCChhhhhhhhhhcC Q lcl|Aclame:pro 339 -WIGDE--VVRFAPYALGGHDQPAAAPGGQRSA 368 (368) Q Consensus 339 -~l~~~--~~~F~~~~Llr~D~~~ra~~~~~~~ 368 (368) ..... -+.|+.... -|.+..|+...++. T Consensus 386 ~~~d~~~i~v~f~~~~p--~~~~e~a~~~~~~g 416 (474) T protein:vir:94 386 LKTDVKDIEISFNFNRM--MNDAEQSQIIAQSQ 416 (474) T ss_pred CCcccceeeEEeccCcc--cCHHHHHHHHHHcC Confidence 00101 145543222 24444454444433 No 176 >protein:vir:9871 Length: 429 # NCBI annotation: hypothetical protein # Family: family:all:125 # MgeID: mge:177 # MgeName: 315.5 # Cross-refs: genbank:acc:NP_795633;genbank:gi:28876408;genbank:GeneID:1257942 Probab=89.23 E-value=0.028 Score=29.13 Aligned_cols=286 Identities=10% Similarity=0.040 Sum_probs=121.4 Q ss_pred cChHHHHHHHHHHhccchhcccccHHHHHHHHHhccc---ccchhhhc------cchH-------HhhccCCCCc----- Q lcl|Aclame:pro 48 LDRRELLDYVECMRMGQWYEPPMPWDGLARSFRAAAH---HSSAVYVK------RNIL-------VSTFIPHPLL----- 106 (368) Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~r~~~~---~~~~~~~~------~~~~-------l~~~~~n~~~----- 106 (368) |+...+..++..... .. -.+..+..+++..-. +......+ .++. ...+..+|.. T Consensus 1 l~~~~l~~~i~~~~~----~~-~r~~~l~~yy~g~~~il~~~~~~~~~~~~ki~~n~~~~ivd~~~~~l~g~~~~~~~~~ 75 (429) T protein:vir:98 1 MTKDLLSELIQKHRS----FN-LSYSAYKQLYEGDHAILQQKQKEQYKPDNRLVVNFAKYIVDTFNGYFIGVPVQTSHEN 75 (429) T ss_pred CCHHHHHHHHHHHHH----HH-HHHHHHHHHhccccccccccccccCCCcceeecchHHHHHHHHhhhhcccCceeecCC Confidence 555555444433210 00 001111222221100 00000000 0000 0001122210 Q ss_pred ---------------CHHHHHHHHHhHhhhCCeeEEEEecCCcceEEEEEecccccccccCCC----e----eEEEeCCc Q lcl|Aclame:pro 107 ---------------SRATFERLVLDWQVFGNAYLERRENVLGGTIRLDTPLAKYVRRGLDLN----T----YFFVQNWQ 163 (368) Q Consensus 107 ---------------~~~~~~~~~~~~ll~Gnay~~i~r~~~G~~~~L~~l~p~~v~~~~~~~----~----~~~~~~~~ 163 (368) -......+..+.+.+|.+|..+..+.+|++ .+..++|..+.+..+.. . .|+...++ T Consensus 76 ~~~~~~l~~~~~~n~~~~~~~~~~~~~~~~G~~~~~v~~d~~g~~-~~~~~~p~~~~~v~dd~~~~~~~~~i~~~~~~~~ 154 (429) T protein:vir:98 76 KQVSNYLELLDGYNDQDDNNAELSKICSIYGHGYELVFNDENAEA-GITYLTPLEAFIVYDDSIRQKPLFAVRYFYNKGG 154 (429) T ss_pred hHHHHHHHHHHhhcCHhHHHHHHHHHHhhcCeEEEEEEecCCCcE-EEEEEcccceEEEEeCCCCCceEEEEEEEEecCc Confidence 012233456688899999999999888875 46667777665433211 0 01111111 Q ss_pred e----------EEEEcC---------------c--cEEEecCCCCcCCccccchhhHHHHHHHHHHHHHHHHHHHHhccC Q lcl|Aclame:pro 164 Q----------PYTFAA---------------G--SVFHLQEPDINQEVYGLPEYLSALNATWLNESATLFRRRYYKNGS 216 (368) Q Consensus 164 ~----------~~~~~~---------------~--dviH~r~~~~~~~~~G~spi~~a~~~i~~~~~a~~~~~~~f~ng~ 216 (368) . .+.+.. + .|+++++ ...|.|-+.-....+.....+..-..+.....+ T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~vPvv~~~n-----~~~g~sd~e~v~~liD~~d~~~s~~~~~~~~~~ 229 (429) T protein:vir:98 155 VLEGSYSDASNITYFKDGEKGIEIGESEPHPFDGVPMIEYVE-----NEERQSLLASVVTLINAFNKAISEKANDVEYFA 229 (429) T ss_pred eEEEEEEeCceEEEEEecCCceEecccccccCCccceEEecC-----CCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHhc Confidence 0 011100 0 2444442 235777777666666655555555555556666 Q ss_pred CCceeEEeCCCCccHHHHHHHHHHHHHhccccccccccccc-cCccccccccccccchhhHHHHHHHHHHHHHHHHHHhC Q lcl|Aclame:pro 217 HAGFILYMTDAAQKQEDVDTLREAMKSAKGPGNFRNLFMYA-PNGKKDGIQLLPVSEVAAKDEFWNIKNVTRDDQLAAHR 295 (368) Q Consensus 217 ~p~gil~~~~~~l~~e~~~~~k~~~~~~~g~~n~~~~~~l~-~~g~~~g~~~~pl~~~~~d~qf~e~~~~~~~~Ia~~fg 295 (368) .|-.+++ +..++++....++. .+.+.+. .+|+..+++ .++.......+.+..+...+.|+..-+ T Consensus 230 ~p~~~i~--g~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~--~l~~~~~~~~~~~~~~~l~~~i~~~s~ 294 (429) T protein:vir:98 230 DAYLKIL--GAELDDETLKSLRD-----------TRIINLKDTDAQQLTVE--FLQKPDADATQEHLLDRLENLIFRTAM 294 (429) T ss_pred Cceeeee--cCCCCcchhhhHhh-----------CceeeccCCCCCCccee--EEeecCCHHHHHHHHHHHHHHHHHHhC Confidence 6766664 43445443322211 1222222 222222333 344334445566667888999999999 Q ss_pred CChHHhcccccccccccCHHHHHHHHHHHHHHHHHHHH--------HHH----HhhcCc-----c----eEeechhhhhc Q lcl|Aclame:pro 296 VPPQLMGIIPNNTGGFGDVEKAAMVFARNEVKPLQDRL--------LAI----NDWIGD-----E----VVRFAPYALGG 354 (368) Q Consensus 296 VPp~~lg~~~~~~~~~sn~e~~~~~f~~~tl~P~~~~i--------e~l----~~~l~~-----~----~~~F~~~~Llr 354 (368) +|..-.+ +.+|.......+....+.-.+... +++ ...+.. + -+.|+ .-+- T Consensus 295 ~p~~~~~-------~~gn~Sg~Al~~~~~~l~~k~~~~~~~~~~~l~~~~~li~~~~~~~~~~~d~~~i~v~f~--~~~p 365 (429) T protein:vir:98 295 VANISDE-------SFGTASGIALRYRLQAMDNLAKTKERKFMSGMNRRYKLIASYPTSKIGPKDWIGIKYKFT--RNLP 365 (429) T ss_pred ccccCcc-------ccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCccccccceEEeC--CCCC Confidence 9853221 112222222222222221111111 111 111111 1 13443 3334 Q ss_pred CChhhhhhhhhhcC Q lcl|Aclame:pro 355 HDQPAAAPGGQRSA 368 (368) Q Consensus 355 ~D~~~ra~~~~~~~ 368 (368) -|.+..|+...+++ T Consensus 366 ~~~~~~a~~~~kl~ 379 (429) T protein:vir:98 366 ANLLEESQIAGNLA 379 (429) T ss_pred cCHHHHHHHHHHHh Confidence 55666677666666 No 177 >protein:vir:7768 Length: 484 # NCBI annotation: gp14 # Family: family:all:524 # MgeID: mge:149 # MgeName: Bxz2 # Cross-refs: genbank:acc:NP_817602;genbank:gi:29566032;genbank:GeneID:1259226 Probab=89.01 E-value=0.029 Score=29.03 Aligned_cols=309 Identities=10% Similarity=0.037 Sum_probs=110.7 Q ss_pred ccCceEEEECCCceeccChHHHHHHHHH----------Hhccchhc--ccccH-HHHHHHHHhcccccchhhhccchHHh Q lcl|Aclame:pro 32 RAAQAEVFSFGDPVEVLDRRELLDYVEC----------MRMGQWYE--PPMPW-DGLARSFRAAAHHSSAVYVKRNILVS 98 (368) Q Consensus 32 ~~~~~~~~~~g~p~~~~~~~~~~~~~~~----------~~~~~~~~--~p~~~-~~l~~~~r~~~~~~~~~~~~~~~~l~ 98 (368) .+..+.+.+--+|+.. ...+..++.- ++.|.... .++.. ..+..+.....+...++... .. T Consensus 1 ~~~~~~~~~~~~~~~~--~~~l~~~~~~~~~rl~~l~~Yy~G~~~i~~~~~~~~~~~~~~~~~~n~~~~ivd~~----~~ 74 (484) T protein:vir:77 1 MTSPLQKQENVDPEKA--REEMLNLFTERTQDLGDNTAYYESERRPDAVGVTVPQQMQKLLAHVGYPRLYIDAI----AA 74 (484) T ss_pred CCCcccccCCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHhccccchhcccccchhHHhhhhhcCcHHHHHHHH----Hh Confidence 1111111111112111 0111111110 11111000 00000 00000000001110000000 00 Q ss_pred hccCCCCc-------------------CHHHHHHHHHhHhhhCCeeEEEEecCCcce-------EEEEEecccccccccC Q lcl|Aclame:pro 99 TFIPHPLL-------------------SRATFERLVLDWQVFGNAYLERRENVLGGT-------IRLDTPLAKYVRRGLD 152 (368) Q Consensus 99 ~~~~n~~~-------------------~~~~~~~~~~~~ll~Gnay~~i~r~~~G~~-------~~L~~l~p~~v~~~~~ 152 (368) ...++++. -......+..+.+.+|.||..+.++..|.+ ..+.+++|..+.+..+ T Consensus 75 ~l~~~g~~~~~~~~~~~~l~~i~~~N~~d~~~~~~~~~a~~~G~a~~~v~~~~~~~~~~~~~~~~~i~~~~p~~~~~~~D 154 (484) T protein:vir:77 75 RQELEGFRLGGADKADEQLWDWWQANDLDIESTLGHTDSLVHGRSYITISKPDPNIDPGVDPEVPIIRVEPPTNLYAQID 154 (484) T ss_pred hhccCceecCCcchhHHHHHHHHHhcCHhHHHHHHHHHHhhcCceEEEEecCCCCcccccccccceEEEeccceeEEEec Confidence 00111110 012233456788999999999999887754 3467777777654333 Q ss_pred CC---e-----eEEEeCCceE---EEEcCc-------------------------cEEEecCCCCcCCccccchhh---- Q lcl|Aclame:pro 153 LN---T-----YFFVQNWQQP---YTFAAG-------------------------SVFHLQEPDINQEVYGLPEYL---- 192 (368) Q Consensus 153 ~~---~-----~~~~~~~~~~---~~~~~~-------------------------dviH~r~~~~~~~~~G~spi~---- 192 (368) .. . ++....++.. ..|.++ .|+||.+..-.++.+|.|.+. T Consensus 155 ~~~~~~~~a~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~g~vPvv~f~N~~~~~~~~G~s~i~~~v~ 234 (484) T protein:vir:77 155 PRTRQVMRAIRAIEDEEGNEVIGATLYLPNNTVIWNREDGQWVQVANVAHNLEMVPVIPIPNRTRLSDLYGTTEITPELR 234 (484) T ss_pred CCCCceEEEEEEEEeecCCcEEEEEEEecCeEEEEEecCCceEeeccccCCCCCcceEEeccccccCccCCcccchHHHH Confidence 21 0 1111111100 011111 256776443334567887654 Q ss_pred HHHHHHHHHHHHHHHHHHHHhccCCCceeEEeCCCCccHHHHHH--HHHHHHHhccccccccccccccCccccccccccc Q lcl|Aclame:pro 193 SALNATWLNESATLFRRRYYKNGSHAGFILYMTDAAQKQEDVDT--LREAMKSAKGPGNFRNLFMYAPNGKKDGIQLLPV 270 (368) Q Consensus 193 ~a~~~i~~~~~a~~~~~~~f~ng~~p~gil~~~~~~l~~e~~~~--~k~~~~~~~g~~n~~~~~~l~~~g~~~g~~~~pl 270 (368) .+.+.+.....-..-...|| +.|--+|. +..+++...+. -...|+.. .++.+.+ + ..+.++..+ T Consensus 235 ~L~Da~~~~~s~~~~~~~~~---a~p~~~i~--G~~~~~~~~~~~~~~~~~~~~-----~~~~~~~-~---~~~~~~~q~ 300 (484) T protein:vir:77 235 SVTDAAARTLMLMQATAELM---GVPQRLLF--GVKGEELGVDPETGQTLFDAY-----LARILAF-E---DHESKAQQF 300 (484) T ss_pred HHHHHHHHHHHHHHHHHHhh---hhhHHHHh--CCCcchhcccccccchhhhhh-----hhhhccc-C---CCCceeEee Confidence 33333333322222223333 34444442 21111111110 01112221 1223332 1 124555555 Q ss_pred cchhhHHHHHHHHHHHHHHHHHHhCCChHHhcccccccccccCHHHHHHHHHHHHHHHHHHH--------HHHHHh---- Q lcl|Aclame:pro 271 SEVAAKDEFWNIKNVTRDDQLAAHRVPPQLMGIIPNNTGGFGDVEKAAMVFARNEVKPLQDR--------LLAIND---- 338 (368) Q Consensus 271 ~~~~~d~qf~e~~~~~~~~Ia~~fgVPp~~lg~~~~~~~~~sn~e~~~~~f~~~tl~P~~~~--------ie~l~~---- 338 (368) ....-+ -|++..+..+.+|+..-++|++.+|....+. ++.+.. .+....|.-.+.. |+++.+ T Consensus 301 ~~~~~e-~~~~~l~~~i~~~s~~~~~p~~~fg~~~~n~---~Sg~Al--~~~~~~l~~ka~~k~~~f~~~l~~~~~l~~~ 374 (484) T protein:vir:77 301 SAAELR-NFVDALDALDRKAAAYTGLPPYYLSFSSENP---ASAEAI--RSSESRLVKTVERKNKIFGGAWEQAMRVAYK 374 (484) T ss_pred cCCChH-HHHHHHHHHHHHHhcccCCCHHHhccccCcc---hHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Confidence 433322 3888888889999999999999998543221 122222 1222222111111 111111 Q ss_pred hcCc-----c----eEeechhhhhcCChhhhhhhhhhcC Q lcl|Aclame:pro 339 WIGD-----E----VVRFAPYALGGHDQPAAAPGGQRSA 368 (368) Q Consensus 339 ~l~~-----~----~~~F~~~~Llr~D~~~ra~~~~~~~ 368 (368) ..+. + -+.|.. -+--+.+..|+...+.+ T Consensus 375 ~~~~~~~~~~~~~i~v~w~~--~~~~s~~~~ad~~~kl~ 411 (484) T protein:vir:77 375 VMNGGDIPPEYYRMESIWRD--PSTPTYAAKADAATKLY 411 (484) T ss_pred HhCCCCcccccccceEEecC--CCCCCHHHHHHHHHHHH Confidence 0110 1 123422 11223344444433322 No 178 >protein:vir:94805 Length: 492 # NCBI annotation: ORF006 # Family: family:all:125 # MgeID: mge:1531 # MgeName: 29 # Cross-refs: genbank:acc:YP_240531;genbank:gi:66396197;genbank:GeneID:5133585 Probab=87.15 E-value=0.041 Score=28.21 Aligned_cols=322 Identities=8% Similarity=0.005 Sum_probs=120.3 Q ss_pred CCcCCCCccccccccccccccCCCcchhhccccCceEEEECCCceecc-ChHHHHHHHH-HHh--ccchhcccccHHHHH Q lcl|Aclame:pro 1 MSRNKTRRAARAASAHVRTANTDAPTEHHTDRAAQAEVFSFGDPVEVL-DRRELLDYVE-CMR--MGQWYEPPMPWDGLA 76 (368) Q Consensus 1 m~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~p~~~~-~~~~~~~~~~-~~~--~~~~~~~p~~~~~l~ 76 (368) +++.+.+.++...-..-=....++..... ..+.-+.+.... +.+-+..+.. ++. .+-....|+.+.. T Consensus 53 i~~~~~~~~r~~~l~~YY~g~~~I~~~~~-------~~~~~~~~~~~~~~~ri~~n~~k~Ivd~~~~yl~G~p~~~~~-- 123 (492) T protein:vir:94 53 IKQHLEKLPEISIGQEYYEQRPDIVKEPK-------PVDATGAVDPLKPDDRMITNFHANLVDQKVSYIVGKPIAFKH-- 123 (492) T ss_pred HHHHHHHHHHHHHHHHHhccccccccccc-------cccccccccccccccccccchHHHHHHHHHhhhcccCceecc-- Confidence 11111111110000000000000000000 000000000000 0000000000 000 1112222332210 Q ss_pred HHHHhcccccchhhhccchHHhhccCCCCcCHHHHHHHHHhHhhhCCeeEEEEecCCcceEEEEEecccccccccCCC-- Q lcl|Aclame:pro 77 RSFRAAAHHSSAVYVKRNILVSTFIPHPLLSRATFERLVLDWQVFGNAYLERRENVLGGTIRLDTPLAKYVRRGLDLN-- 154 (368) Q Consensus 77 ~~~r~~~~~~~~~~~~~~~~l~~~~~n~~~~~~~~~~~~~~~ll~Gnay~~i~r~~~G~~~~L~~l~p~~v~~~~~~~-- 154 (368) .. .+....+..+..|. .......+..+.+.+|.+|..+..+.+|++ .+..++|..+.+..+.. T Consensus 124 -------~d-----~~~~~~l~~~~~n~--~~~~~~~~~~~a~~~G~a~~~v~~d~dg~~-~~~~~~p~~~~~v~d~~~~ 188 (492) T protein:vir:94 124 -------TD-----DEVVKRIDEVLGNR--FDDKLHSVLTGASNKGIEWLHPYLDEEGEF-KLFRVPAEQGIPIWTDKEH 188 (492) T ss_pred -------Cc-----hHHHHHHHHHHhcc--HHHHHHHHHHHHhhCCeEEEEEEecCCCce-EEEEEcccceEEEEcCCCC Confidence 00 00011121122232 123445677888999999999999888874 56677887765543311 Q ss_pred --e-----eEEEeCCceEEEEcCccEEEecCC---------------------CCc---------CCccccchhhHHHHH Q lcl|Aclame:pro 155 --T-----YFFVQNWQQPYTFAAGSVFHLQEP---------------------DIN---------QEVYGLPEYLSALNA 197 (368) Q Consensus 155 --~-----~~~~~~~~~~~~~~~~dviH~r~~---------------------~~~---------~~~~G~spi~~a~~~ 197 (368) . ||..........+.+..|.++... ++. +.-.|+|-+...... T Consensus 189 ~~~~a~ir~~~~~~~~~~~~y~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~vPvv~~~nn~~~~sd~e~v~~l 268 (492) T protein:vir:94 189 EELEAFIRMYKLENETKVEYWDKVTVNYYVYENGSLIPDYSNNLENSKTHFSTGSWGKIPFIPFKNNDLEISDIFMYKTL 268 (492) T ss_pred CceEEEEEEEeeccceeEEEEecCeEEEEEEecCeeeeccccccccccccccccCCCccceEEecCCCCCCCchHHHHHH Confidence 1 111111111122222222222100 000 112477777766666 Q ss_pred HHHHHHHHHHHHHHHhccCCCceeEEeCCCCccHHHHHHHHHHHHHhccccccccccccccCccccccccccccchhhHH Q lcl|Aclame:pro 198 TWLNESATLFRRRYYKNGSHAGFILYMTDAAQKQEDVDTLREAMKSAKGPGNFRNLFMYAPNGKKDGIQLLPVSEVAAKD 277 (368) Q Consensus 198 i~~~~~a~~~~~~~f~ng~~p~gil~~~~~~l~~e~~~~~k~~~~~~~g~~n~~~~~~l~~~g~~~g~~~~pl~~~~~d~ 277 (368) +.....+..-..+.+...+.|-.+++ +. +.+........+.. .+.+.+..+ .+++| ++...... T Consensus 269 iDa~d~~~S~~~~~~~~~~~p~lv~~--g~--~~~~~~~~~~~~~~-------~~~~~~~~~---~~~~~--l~~~~~~~ 332 (492) T protein:vir:94 269 IDAYNRRLSDLSNTFKDSNELTYVLK--NY--DDQELPEFKRLLRY-------YGAIKVSDN---GGVDT--IQVEVPVE 332 (492) T ss_pred HHHHHHHHHHHHHHHHHhcCceeeee--cC--CcccchhhHHHHhh-------ccceecCCC---Cccee--EeccCCHH Confidence 66655555555555666666766654 32 22222222222221 122223222 23444 32223344 Q ss_pred HHHHHHHHHHHHHHHHhCCChHHhcccccccccccCHHHHHHHHHHHHHHHHHHHHHH-----H-------HhhcCc--- Q lcl|Aclame:pro 278 EFWNIKNVTRDDQLAAHRVPPQLMGIIPNNTGGFGDVEKAAMVFARNEVKPLQDRLLA-----I-------NDWIGD--- 342 (368) Q Consensus 278 qf~e~~~~~~~~Ia~~fgVPp~~lg~~~~~~~~~sn~e~~~~~f~~~tl~P~~~~ie~-----l-------~~~l~~--- 342 (368) .+....+...+.|+..-++|..-.+...+ |.......+....+.-.+...+. + ...++. T Consensus 333 ~~~~~~~~l~~~I~~~s~~p~~~~~~~~~------n~Sg~Al~~~~~~l~~k~~~k~~~f~~~l~~~~~li~~~~~~~~~ 406 (492) T protein:vir:94 333 NSKKYLDELYQKIMLFGQAVDFSSDKFGS------APSGVALEFLYTNLNLKADKLARKAKVAIQELLWFVFEHFDIKGE 406 (492) T ss_pred HHHHHHHHHHHHHHHHhCCcCCCcccccc------CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcc Confidence 55666677788899999998644322111 22222222222222222222111 1 111221 Q ss_pred -ceEeechhhhhcCChhhhhhhhhhcC Q lcl|Aclame:pro 343 -EVVRFAPYALGGHDQPAAAPGGQRSA 368 (368) Q Consensus 343 -~~~~F~~~~Llr~D~~~ra~~~~~~~ 368 (368) .-+++....-+--|.+..++...+++ T Consensus 407 ~~~i~v~f~~~~p~~~~e~~~~~~kl~ 433 (492) T protein:vir:94 407 HKDVDISFNYNKVANTELQVQTAQQSM 433 (492) T ss_pred cceeeEEecCCCCCCHHHHHHHHHHHh Confidence 11222222223345666666666666 No 179 >protein:vir:95899 Length: 474 # NCBI annotation: ORF006 # Family: family:all:125 # MgeID: mge:1588 # MgeName: 71 # Cross-refs: genbank:acc:YP_240382;genbank:gi:66396046;genbank:GeneID:5133410 Probab=87.15 E-value=0.041 Score=28.21 Aligned_cols=320 Identities=10% Similarity=0.031 Sum_probs=112.1 Q ss_pred CCcCCCCccccccccccccccCCCcch-hhccccCceEEEECCCce-ec-cChH-HHHHHHHHHhccchhcccccHHHHH Q lcl|Aclame:pro 1 MSRNKTRRAARAASAHVRTANTDAPTE-HHTDRAAQAEVFSFGDPV-EV-LDRR-ELLDYVECMRMGQWYEPPMPWDGLA 76 (368) Q Consensus 1 m~~~k~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~p~-~~-~~~~-~~~~~~~~~~~~~~~~~p~~~~~l~ 76 (368) +++.+.+..+...-..-=...+.+... .......... -..|. .+ .+.. .+.+. ..+-....|+.+.. T Consensus 36 i~~~~~~~~~~~~l~~Yy~g~~~i~~~~~~~~~~~~~~---~~~~~~ki~~n~~k~Iv~~----~~~yl~g~p~~~~~-- 106 (474) T protein:vir:95 36 INNHKQKLKDINVGQKYYDKDNDINYQAYKQDLHGNID---YTKPDWRITTNFHQNLVDQ----KVSYVAGKPVTYAH-- 106 (474) T ss_pred HHHHHHHHHHHHHHHHHhcccCccccccchhhhccccc---ccccccccccchHHHHHHh----hhhhhcccCceecc-- Confidence 111000000000000000000000000 0000000000 00000 00 0000 00000 01112223333210 Q ss_pred HHHHhcccccchhhhccchHHhhccCCCCcCHHHHHHHHHhHhhhCCeeEEEEecCCcceEEEEEecccccccccCCC-- Q lcl|Aclame:pro 77 RSFRAAAHHSSAVYVKRNILVSTFIPHPLLSRATFERLVLDWQVFGNAYLERRENVLGGTIRLDTPLAKYVRRGLDLN-- 154 (368) Q Consensus 77 ~~~r~~~~~~~~~~~~~~~~l~~~~~n~~~~~~~~~~~~~~~ll~Gnay~~i~r~~~G~~~~L~~l~p~~v~~~~~~~-- 154 (368) .. .+....+..+..|. .......++.+.+.+|.||..+.++.+|++ .+..++|..+-+..+.. T Consensus 107 -------~~-----~~~~~~l~~~~~n~--~~~~~~~l~~~~~~~G~~~~~~~~d~~~~~-~i~~~~p~~~~~v~d~~~~ 171 (474) T protein:vir:95 107 -------DD-----DKVLDVIHQVLDTR--WDNKLIDILTAASNKGIDWLQVYINEDGEL-KLFRVPAEQAIPIWTDKER 171 (474) T ss_pred -------CC-----hHHHHHHHHHHhcc--HHHHHHHHHHHHhhCCeEEEEeeeCCCCce-EEEEEcccceEEEEcCCCC Confidence 00 00111111111121 223445677889999999999999888864 56667777766543321 Q ss_pred --e---eEEEeCCc--eEEEEcCccEEEecCCC---------------------C---------cCCccccchhhHHHHH Q lcl|Aclame:pro 155 --T---YFFVQNWQ--QPYTFAAGSVFHLQEPD---------------------I---------NQEVYGLPEYLSALNA 197 (368) Q Consensus 155 --~---~~~~~~~~--~~~~~~~~dviH~r~~~---------------------~---------~~~~~G~spi~~a~~~ 197 (368) . .+.+...+ ....+.++.|.++..-+ + .+...|.|-+...... T Consensus 172 ~~~~a~ir~~~~~~~~~~~vy~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vPvv~~~nn~~~~~d~e~v~~l 251 (474) T protein:vir:95 172 EQLNAFIRIFTFNGETKVEYWTAETVTYYVYENGGLIPDFYYGDEHIQTHFSTGSWERVPFIAFKNNPEEVSDIWMYKSF 251 (474) T ss_pred CceEEEEEEEeecCeeEEEEEeCCeEEEEEEcCCceeeccccccccccCcccccCCCccceEEecCCCCCCCchHHHHHH Confidence 0 01111111 11122233332221000 0 0112466666555555 Q ss_pred HHHHHHHHHHHHHHHhccCCCceeEEeCCCCccHHHHHHHHHHHHHhccccccccccccccCccccccccccccchhhHH Q lcl|Aclame:pro 198 TWLNESATLFRRRYYKNGSHAGFILYMTDAAQKQEDVDTLREAMKSAKGPGNFRNLFMYAPNGKKDGIQLLPVSEVAAKD 277 (368) Q Consensus 198 i~~~~~a~~~~~~~f~ng~~p~gil~~~~~~l~~e~~~~~k~~~~~~~g~~n~~~~~~l~~~g~~~g~~~~pl~~~~~d~ 277 (368) +.....+..-..+.+...+.|-.++ ++...+ ....+...++ ..+++.+..+ .+++|. +....+. T Consensus 252 iDa~d~~~S~~~~~~~~~~~p~lv~--~g~~~~--~~~~~~~~~~-------~~~~i~~~~~---~~~~~l--~~~~~~~ 315 (474) T protein:vir:95 252 VDAIDKRLSDVQNMFDESVELIYIL--RGYEGE--DLSEFMEGLK-------YYKAINVSSD---GGVETI--QVEVPVA 315 (474) T ss_pred HHHHHHHHHHHHHHHHHhhcchhhh--cCCCcc--cccchhhhhh-------ccceeeccCC---CceeEE--eccCCHH Confidence 5544433333344444444555454 343222 1111222222 1223333222 334443 3333455 Q ss_pred HHHHHHHHHHHHHHHHhCCChHHhcccccccccccCHHHHHHHHHHHHHHHHHHHH--------HH----HHhhcCcc-- Q lcl|Aclame:pro 278 EFWNIKNVTRDDQLAAHRVPPQLMGIIPNNTGGFGDVEKAAMVFARNEVKPLQDRL--------LA----INDWIGDE-- 343 (368) Q Consensus 278 qf~e~~~~~~~~Ia~~fgVPp~~lg~~~~~~~~~sn~e~~~~~f~~~tl~P~~~~i--------e~----l~~~l~~~-- 343 (368) .+.+..+.....|...-++|.....-.. +|.......+.-..+.-.+... ++ +...++.. T Consensus 316 ~~~~~~~~l~~~I~~~s~~p~~~~~~~~------~n~Sg~Alk~~~~~l~~k~~~~~~~~~~~l~~~~~~i~~~~g~~~d 389 (474) T protein:vir:95 316 STKEYLDMMRAYIVEFGQGVDFQTDKFG------SATSGIALKFLYTNLNLKANKLKNKANVALQELMQFILDFNKIKLD 389 (474) T ss_pred HHHHHHHHHHHHHHHHhCCcCccccccc------cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcc Confidence 6677777788899999999865432111 1222222222222111111111 11 11222211 Q ss_pred --e--EeechhhhhcCChhhhhhhhhhcC Q lcl|Aclame:pro 344 --V--VRFAPYALGGHDQPAAAPGGQRSA 368 (368) Q Consensus 344 --~--~~F~~~~Llr~D~~~ra~~~~~~~ 368 (368) - +.|+.. +--|....|+.+..+. T Consensus 390 ~~~i~i~f~~~--~p~~~~e~a~~~~~~g 416 (474) T protein:vir:95 390 AKEIEITFNFN--VMVNDLEQSQIGAQSQ 416 (474) T ss_pred cceeeEEecCC--CccCHHHHHHHHHHcC Confidence 1 445422 2234444555443323 No 180 >protein:vir:96266 Length: 474 # NCBI annotation: ORF007 # Family: family:all:125 # MgeID: mge:1612 # MgeName: ROSA # Cross-refs: genbank:acc:YP_240308;genbank:gi:66395972;genbank:GeneID:5133343 Probab=87.15 E-value=0.041 Score=28.21 Aligned_cols=320 Identities=10% Similarity=0.031 Sum_probs=112.1 Q ss_pred CCcCCCCccccccccccccccCCCcch-hhccccCceEEEECCCce-ec-cChH-HHHHHHHHHhccchhcccccHHHHH Q lcl|Aclame:pro 1 MSRNKTRRAARAASAHVRTANTDAPTE-HHTDRAAQAEVFSFGDPV-EV-LDRR-ELLDYVECMRMGQWYEPPMPWDGLA 76 (368) Q Consensus 1 m~~~k~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~p~-~~-~~~~-~~~~~~~~~~~~~~~~~p~~~~~l~ 76 (368) +++.+.+..+...-..-=...+.+... .......... -..|. .+ .+.. .+.+. ..+-....|+.+.. T Consensus 36 i~~~~~~~~~~~~l~~Yy~g~~~i~~~~~~~~~~~~~~---~~~~~~ki~~n~~k~Iv~~----~~~yl~g~p~~~~~-- 106 (474) T protein:vir:96 36 INNHKQKLKDINVGQKYYDKDNDINYQAYKQDLHGNID---YTKPDWRITTNFHQNLVDQ----KVSYVAGKPVTYAH-- 106 (474) T ss_pred HHHHHHHHHHHHHHHHHhcccCccccccchhhhccccc---ccccccccccchHHHHHHh----hhhhhcccCceecc-- Confidence 111000000000000000000000000 0000000000 00000 00 0000 00000 01112223333210 Q ss_pred HHHHhcccccchhhhccchHHhhccCCCCcCHHHHHHHHHhHhhhCCeeEEEEecCCcceEEEEEecccccccccCCC-- Q lcl|Aclame:pro 77 RSFRAAAHHSSAVYVKRNILVSTFIPHPLLSRATFERLVLDWQVFGNAYLERRENVLGGTIRLDTPLAKYVRRGLDLN-- 154 (368) Q Consensus 77 ~~~r~~~~~~~~~~~~~~~~l~~~~~n~~~~~~~~~~~~~~~ll~Gnay~~i~r~~~G~~~~L~~l~p~~v~~~~~~~-- 154 (368) .. .+....+..+..|. .......++.+.+.+|.||..+.++.+|++ .+..++|..+-+..+.. T Consensus 107 -------~~-----~~~~~~l~~~~~n~--~~~~~~~l~~~~~~~G~~~~~~~~d~~~~~-~i~~~~p~~~~~v~d~~~~ 171 (474) T protein:vir:96 107 -------DD-----DKVLDVIHQVLDTR--WDNKLIDILTAASNKGIDWLQVYINEDGEL-KLFRVPAEQAIPIWTDKER 171 (474) T ss_pred -------CC-----hHHHHHHHHHHhcc--HHHHHHHHHHHHhhCCeEEEEeeeCCCCce-EEEEEcccceEEEEcCCCC Confidence 00 00111111111121 223445677889999999999999888864 56667777766543321 Q ss_pred --e---eEEEeCCc--eEEEEcCccEEEecCCC---------------------C---------cCCccccchhhHHHHH Q lcl|Aclame:pro 155 --T---YFFVQNWQ--QPYTFAAGSVFHLQEPD---------------------I---------NQEVYGLPEYLSALNA 197 (368) Q Consensus 155 --~---~~~~~~~~--~~~~~~~~dviH~r~~~---------------------~---------~~~~~G~spi~~a~~~ 197 (368) . .+.+...+ ....+.++.|.++..-+ + .+...|.|-+...... T Consensus 172 ~~~~a~ir~~~~~~~~~~~vy~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vPvv~~~nn~~~~~d~e~v~~l 251 (474) T protein:vir:96 172 EQLNAFIRIFTFNGETKVEYWTAETVTYYVYENGGLIPDFYYGDEHIQTHFSTGSWERVPFIAFKNNPEEVSDIWMYKSF 251 (474) T ss_pred CceEEEEEEEeecCeeEEEEEeCCeEEEEEEcCCceeeccccccccccCcccccCCCccceEEecCCCCCCCchHHHHHH Confidence 0 01111111 11122233332221000 0 0112466666555555 Q ss_pred HHHHHHHHHHHHHHHhccCCCceeEEeCCCCccHHHHHHHHHHHHHhccccccccccccccCccccccccccccchhhHH Q lcl|Aclame:pro 198 TWLNESATLFRRRYYKNGSHAGFILYMTDAAQKQEDVDTLREAMKSAKGPGNFRNLFMYAPNGKKDGIQLLPVSEVAAKD 277 (368) Q Consensus 198 i~~~~~a~~~~~~~f~ng~~p~gil~~~~~~l~~e~~~~~k~~~~~~~g~~n~~~~~~l~~~g~~~g~~~~pl~~~~~d~ 277 (368) +.....+..-..+.+...+.|-.++ ++...+ ....+...++ ..+++.+..+ .+++|. +....+. T Consensus 252 iDa~d~~~S~~~~~~~~~~~p~lv~--~g~~~~--~~~~~~~~~~-------~~~~i~~~~~---~~~~~l--~~~~~~~ 315 (474) T protein:vir:96 252 VDAIDKRLSDVQNMFDESVELIYIL--RGYEGE--DLSEFMEGLK-------YYKAINVSSD---GGVETI--QVEVPVA 315 (474) T ss_pred HHHHHHHHHHHHHHHHHhhcchhhh--cCCCcc--cccchhhhhh-------ccceeeccCC---CceeEE--eccCCHH Confidence 5544433333344444444555454 343222 1111222222 1223333222 334443 3333455 Q ss_pred HHHHHHHHHHHHHHHHhCCChHHhcccccccccccCHHHHHHHHHHHHHHHHHHHH--------HH----HHhhcCcc-- Q lcl|Aclame:pro 278 EFWNIKNVTRDDQLAAHRVPPQLMGIIPNNTGGFGDVEKAAMVFARNEVKPLQDRL--------LA----INDWIGDE-- 343 (368) Q Consensus 278 qf~e~~~~~~~~Ia~~fgVPp~~lg~~~~~~~~~sn~e~~~~~f~~~tl~P~~~~i--------e~----l~~~l~~~-- 343 (368) .+.+..+.....|...-++|.....-.. +|.......+.-..+.-.+... ++ +...++.. T Consensus 316 ~~~~~~~~l~~~I~~~s~~p~~~~~~~~------~n~Sg~Alk~~~~~l~~k~~~~~~~~~~~l~~~~~~i~~~~g~~~d 389 (474) T protein:vir:96 316 STKEYLDMMRAYIVEFGQGVDFQTDKFG------SATSGIALKFLYTNLNLKANKLKNKANVALQELMQFILDFNKIKLD 389 (474) T ss_pred HHHHHHHHHHHHHHHHhCCcCccccccc------cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcc Confidence 6677777788899999999865432111 1222222222222111111111 11 11222211 Q ss_pred --e--EeechhhhhcCChhhhhhhhhhcC Q lcl|Aclame:pro 344 --V--VRFAPYALGGHDQPAAAPGGQRSA 368 (368) Q Consensus 344 --~--~~F~~~~Llr~D~~~ra~~~~~~~ 368 (368) - +.|+.. +--|....|+.+..+. T Consensus 390 ~~~i~i~f~~~--~p~~~~e~a~~~~~~g 416 (474) T protein:vir:96 390 AKEIEITFNFN--VMVNDLEQSQIGAQSQ 416 (474) T ss_pred cceeeEEecCC--CccCHHHHHHHHHHcC Confidence 1 445422 2234444555443323 No 181 >protein:vir:105292 Length: 478 # NCBI annotation: putative phage portal protein # Family: family:all:125 # MgeID: mge:1679 # MgeName: PH15 # Cross-refs: genbank:acc:YP_950666;genbank:gi:119967836;genbank:GeneID:4643171 Probab=86.62 E-value=0.044 Score=28.00 Aligned_cols=312 Identities=8% Similarity=0.014 Sum_probs=115.2 Q ss_pred CCcCCCCccc------ccccccccccc---CCCcchhhccccCceEEEECCCceeccChHHHHHHHHHHhccchhccccc Q lcl|Aclame:pro 1 MSRNKTRRAA------RAASAHVRTAN---TDAPTEHHTDRAAQAEVFSFGDPVEVLDRRELLDYVECMRMGQWYEPPMP 71 (368) Q Consensus 1 m~~~k~~~~~------~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~p~~ 71 (368) +++.+.+.++ +-...|.-... ........ ...+... ...+-|-- +.+. ..+-....|+. T Consensus 35 i~~~~~~~~~~~~~~~yY~g~~~i~~~~~~~~~~~~~~-~~~~~~k-i~~n~~~~------ivd~----~~~~l~g~~~~ 102 (478) T protein:vir:10 35 VREHKENIDNITMGERYYNHHPDILDAPPKRDVNGDYD-ETKPDWR-MYTNYHQN------LVDQ----KVAYAVANPVT 102 (478) T ss_pred HHHHHHHHHHHHHHHHHhcCCCchhccccccccccccc-cccccce-eccchHHH------HHHH----HHhhhccCCee Confidence 1100000000 00000000000 00000000 0000000 00000000 0000 00111122322 Q ss_pred HHHHHHHHHhcccccchhhhccchHHhhccCCCCcCHHHHHHHHHhHhhhCCeeEEEEecCCcceEEEEEeccccccccc Q lcl|Aclame:pro 72 WDGLARSFRAAAHHSSAVYVKRNILVSTFIPHPLLSRATFERLVLDWQVFGNAYLERRENVLGGTIRLDTPLAKYVRRGL 151 (368) Q Consensus 72 ~~~l~~~~r~~~~~~~~~~~~~~~~l~~~~~n~~~~~~~~~~~~~~~ll~Gnay~~i~r~~~G~~~~L~~l~p~~v~~~~ 151 (368) +.+ .. .+....+..+..|. .......++.+.+.+|.+|..+..+.+|++ .+..++|..+.+.. T Consensus 103 ~~~---------~~-----d~~~~~l~~~~~n~--~~~~~~~~~~~~~~~G~~~~~~~~d~~g~~-~~~~~~p~~~~~i~ 165 (478) T protein:vir:10 103 FGV---------DN-----DKALKQIQHTLNHK--WDDKLVDILTAASNKGIEWVQPYVDEEGEF-KTFRVPAEQAVPIW 165 (478) T ss_pred eec---------CC-----hHHHHHHHHHHhcC--HHHHHHHHHHHHHhcCeEEEEEEecCCCee-EEEEEcccceEEEE Confidence 110 00 01111111122221 224445677889999999999998888865 46667777665543 Q ss_pred CCC----e-----eEEEeCCceEEEEcCcc---------------------------------------EEEecCCCCcC Q lcl|Aclame:pro 152 DLN----T-----YFFVQNWQQPYTFAAGS---------------------------------------VFHLQEPDINQ 183 (368) Q Consensus 152 ~~~----~-----~~~~~~~~~~~~~~~~d---------------------------------------viH~r~~~~~~ 183 (368) +.. . +|..........+.++. |+||++ T Consensus 166 d~~~~~~~~~~v~~~~~~~~~~~~~y~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vPvv~~~n----- 240 (478) T protein:vir:10 166 TNKERDELQAFIRVYELDGAERVEYWTKDDVTYYELKEGQLIPDFYRSDDHIQPHYYQGNKLMSWGRVPFIPFKN----- 240 (478) T ss_pred cCCCCCceEEEEEEEEecCceEEEEEeCCeEEEEEEcCCeeeccccccccccccceecccccccCCccceEEecc----- Confidence 211 0 11111111111122222 333332 Q ss_pred CccccchhhHHHHHHHHHHHHHHHHHHHHhccCCCceeEEeCCCCccHHHHHHHHHHHHHhccccccccccccccCcccc Q lcl|Aclame:pro 184 EVYGLPEYLSALNATWLNESATLFRRRYYKNGSHAGFILYMTDAAQKQEDVDTLREAMKSAKGPGNFRNLFMYAPNGKKD 263 (368) Q Consensus 184 ~~~G~spi~~a~~~i~~~~~a~~~~~~~f~ng~~p~gil~~~~~~l~~e~~~~~k~~~~~~~g~~n~~~~~~l~~~g~~~ 263 (368) ..+|.|-+......+.....+..-..+.+...+.|-.++ ++...++. ......++. .+.+.+. +.... T Consensus 241 ~~~g~sd~~~v~~liDa~~~~~S~~~~~~~~~~~p~~~~--~g~~~~~~--~~~~~~~~~-------~~~~~~~-~~~~~ 308 (478) T protein:vir:10 241 NPQEVSDLFMYKTIIDALDKRLSDTQNTFDESVELIYIL--KGYEGEDM--KDFMHNLKY-------YKAISVA-GESGS 308 (478) T ss_pred CCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHhhCceeee--ecCCcccc--chhhhhhhh-------cceEEec-CCCCC Confidence 235777666555555444444344444444445565554 34322221 111111111 1222221 11113 Q ss_pred ccccccccchhhHHHHHHHHHHHHHHHHHHhCCChHHhcccccccccccCHHHHHHHHHHHHHHHHHHHHH--------H Q lcl|Aclame:pro 264 GIQLLPVSEVAAKDEFWNIKNVTRDDQLAAHRVPPQLMGIIPNNTGGFGDVEKAAMVFARNEVKPLQDRLL--------A 335 (368) Q Consensus 264 g~~~~pl~~~~~d~qf~e~~~~~~~~Ia~~fgVPp~~lg~~~~~~~~~sn~e~~~~~f~~~tl~P~~~~ie--------~ 335 (368) +++| ++.......+.+..+...+.|...-++|..-.+... +|.....+.+....+.-.+...+ + T Consensus 309 ~~~~--l~~~~~~~~~~~~~~~l~~~i~~~s~~p~~~~~~~~------~n~Sg~Al~~~~~~l~~k~~~~~~~~~~~l~~ 380 (478) T protein:vir:10 309 GVDT--IKVEVPIDSVKEYTKMLRDYIIEFGQGVDFQQDKFG------NSPSGIALKFMYSNLDLKANKLKNKTLTALQE 380 (478) T ss_pred cceE--EeecCChHHHHHHHHHHHHHHHHHhCccccCccccc------cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Confidence 3444 333334566777788888899999999864432111 12222223232222222222111 1 Q ss_pred ----HHhhcCcc------eEeechhhhhcCChhhhhhhhhhcC Q lcl|Aclame:pro 336 ----INDWIGDE------VVRFAPYALGGHDQPAAAPGGQRSA 368 (368) Q Consensus 336 ----l~~~l~~~------~~~F~~~~Llr~D~~~ra~~~~~~~ 368 (368) +...++.. -+.|+...- -|.+..|+...+.+ T Consensus 381 ~~~li~~~~g~~~~~~~i~i~f~~~~p--~d~~e~a~~~~kl~ 421 (478) T protein:vir:10 381 LLQYIIDFYRLDVKVQDIEITFNFNVM--VNELENSQIAMNST 421 (478) T ss_pred HHHHHHHHhCCCcccccceEEecCCCC--CCHHHHHHHHHHHh Confidence 11112221 145643222 45666666666666 No 182 >protein:vir:78805 Length: 511 # NCBI annotation: portal protein # Family: family:all:125 # MgeID: mge:1858 # MgeName: 80alpha # Cross-refs: genbank:acc:YP_001285356;genbank:gi:148717884;genbank:GeneID:5246936 Probab=86.40 E-value=0.046 Score=27.92 Aligned_cols=324 Identities=12% Similarity=0.028 Sum_probs=121.1 Q ss_pred CC----cCCCC---ccccccccccccccC-CCcchhhccccCceEEEECCCceeccChHHHHHHHHHHhccchhcccccH Q lcl|Aclame:pro 1 MS----RNKTR---RAARAASAHVRTANT-DAPTEHHTDRAAQAEVFSFGDPVEVLDRRELLDYVECMRMGQWYEPPMPW 72 (368) Q Consensus 1 m~----~~k~~---~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 72 (368) ++ +++.+ -.++-...|...... ....... +... +..+-|-.+ .+. ..+-....|+.+ T Consensus 49 i~~~~~~~~~r~~~l~~Yy~g~~~il~~~~~~~~~~~----~~~k-i~~n~~k~I------v~~----~~~yl~g~p~~~ 113 (511) T protein:vir:78 49 IEHHMDYQRPRLKVLSDYYEGKTKNLVELTRRKEEYM----ADNR-VAHDYASYI------SDF----INGYFLGNPIQY 113 (511) T ss_pred HHHHHHhhhHHHHHHHHHhhccCccccccCccccccc----Ccce-eecchHHHH------HHH----HhhhhcccCcee Confidence 11 11100 011111111100000 0000000 0000 011111111 010 011112223322 Q ss_pred HHHHHHHHhcccccchhhhccchHHhh-ccCCCCcCHHHHHHHHHhHhhhCCeeEEEEecCCcceEEEEEeccccccccc Q lcl|Aclame:pro 73 DGLARSFRAAAHHSSAVYVKRNILVST-FIPHPLLSRATFERLVLDWQVFGNAYLERRENVLGGTIRLDTPLAKYVRRGL 151 (368) Q Consensus 73 ~~l~~~~r~~~~~~~~~~~~~~~~l~~-~~~n~~~~~~~~~~~~~~~ll~Gnay~~i~r~~~G~~~~L~~l~p~~v~~~~ 151 (368) .+ .. .+....+.. +.-| .-......+..+++.+|.||.++.++.+|++ .+..++|..+.+.. T Consensus 114 ~~---------~d-----~~~~~~l~~~~~~n--~~~~~~~~~~~~~~~~G~a~~~vy~d~dg~~-~i~~~~p~~~~~v~ 176 (511) T protein:vir:78 114 QD---------DD-----KDVLEAIEAFNDLN--DVESHNRSLGLDLSIYGKAYELMIRNQDDET-RLYKSDAMSTFIIY 176 (511) T ss_pred ec---------Cc-----hHHHHHHHHHHhhc--ChhHHHHHHHHHHHhcCeeEEEEEeCCCCce-EEEEEcccceEEEE Confidence 10 00 000111111 1111 1223455677889999999999999888864 56777777765544 Q ss_pred CCC---------eeEEEeC-C-c--e----EEEEcCccEEEecCCCC-------------------------cCCccccc Q lcl|Aclame:pro 152 DLN---------TYFFVQN-W-Q--Q----PYTFAAGSVFHLQEPDI-------------------------NQEVYGLP 189 (368) Q Consensus 152 ~~~---------~~~~~~~-~-~--~----~~~~~~~dviH~r~~~~-------------------------~~~~~G~s 189 (368) +.. .||.... + + . ...+.++.+.++...+. .+.-.|.| T Consensus 177 dd~~~~~~~~~vr~~~~~~~~~~~~~~~~~~~vyt~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~vPvv~~~n~~~g~g 256 (511) T protein:vir:78 177 DNTVERNSIAGVRYLRTKPIDKTDEDEVFTVDLFTSHGVYRYLTNRTNGLKLTPRENSFESHSFERMPITEFSNNERRKG 256 (511) T ss_pred cCCCCCceEEEEEEEEeeeccccccceEEEEEEEeCCcEEEEEecCCCcccccccccccccCcCcccceEEecCCCCCCC Confidence 321 1222110 0 0 0 12334444444421110 01124677 Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHhccCCCceeEEeCCCCccHHHHHHHHHHHHHhcccccccccccccc--Ccccccccc Q lcl|Aclame:pro 190 EYLSALNATWLNESATLFRRRYYKNGSHAGFILYMTDAAQKQEDVDTLREAMKSAKGPGNFRNLFMYAP--NGKKDGIQL 267 (368) Q Consensus 190 pi~~a~~~i~~~~~a~~~~~~~f~ng~~p~gil~~~~~~l~~e~~~~~k~~~~~~~g~~n~~~~~~l~~--~g~~~g~~~ 267 (368) -+.-....|.....+..-..+.+...+.|-.+++ .....++++.+..+...- -+......... ...+.+.++ T Consensus 257 d~e~v~~liDa~~~~~S~~~~~~~~~~~~~lv~~-G~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~ 330 (511) T protein:vir:78 257 DYEKVITLIDLYDNAESDTANYMSDLNDAMLLIK-GNLNLDPVEVRKQKEANV-----LFLEPTVYVDAEGRETEGSVDG 330 (511) T ss_pred chhhhHHHHHHHHHHHHHHHHHHHHhhcchhhee-cCccCCchhhcccccccc-----eeccccceeccccccCCCCcce Confidence 6666655555444444444444444455655554 212233333222221100 00000000000 011223344 Q ss_pred ccccchhhHHHHHHHHHHHHHHHHHHhCCChHHhcccccccccccCHHHHHHHHH---------------HHHHHHHHHH Q lcl|Aclame:pro 268 LPVSEVAAKDEFWNIKNVTRDDQLAAHRVPPQLMGIIPNNTGGFGDVEKAAMVFA---------------RNEVKPLQDR 332 (368) Q Consensus 268 ~pl~~~~~d~qf~e~~~~~~~~Ia~~fgVPp~~lg~~~~~~~~~sn~e~~~~~f~---------------~~tl~P~~~~ 332 (368) +.++.......+.+..+...+.|+..-++|....+...+ |.......+. ...|.-.++. T Consensus 331 ~~l~~~~~~~~~e~~~~~L~~~I~~~s~~P~~~~~~~~~------n~Sg~Al~~~~~~l~~ka~~~~~~f~~~l~~~~~l 404 (511) T protein:vir:78 331 GYIYKQYDVQGTEAYKDRLNSDIHMFTNTPNMKDDNFSG------TQSGEAMKYKLFGLEQRTKTKEGLFTKGLRRRAKL 404 (511) T ss_pred eEEeecCCHHHHHHHHHHHHHHHHHHhCCcccccccccc------ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Confidence 444444445666777888899999999999765543221 2212222221 1122222222 Q ss_pred HHHHHhhcCc-----ce--EeechhhhhcCChhhhhhhhhhcC Q lcl|Aclame:pro 333 LLAINDWIGD-----EV--VRFAPYALGGHDQPAAAPGGQRSA 368 (368) Q Consensus 333 ie~l~~~l~~-----~~--~~F~~~~Llr~D~~~ra~~~~~~~ 368 (368) |.++-...+. ++ +++.+..-+--|.+..++...+++ T Consensus 405 i~~~~~~~~~~~~~~~~~~i~~~f~~~~p~n~~e~~d~~~kl~ 447 (511) T protein:vir:78 405 LETILKNTRSIDANKDFNTVRYVYNRNLPKSLIEELKAYIDSG 447 (511) T ss_pred HHHHHHhcCCCccccccccceEEeCCCCCcCHHHHHHHHHHHh Confidence 2111111110 11 233322333345555566555555 No 183 >protein:vir:96366 Length: 511 # NCBI annotation: ORF006 # Family: family:all:125 # MgeID: mge:1613 # MgeName: 53 # Cross-refs: genbank:acc:YP_239644;genbank:gi:66395376;genbank:GeneID:5132842 Probab=86.40 E-value=0.046 Score=27.92 Aligned_cols=324 Identities=12% Similarity=0.028 Sum_probs=121.1 Q ss_pred CC----cCCCC---ccccccccccccccC-CCcchhhccccCceEEEECCCceeccChHHHHHHHHHHhccchhcccccH Q lcl|Aclame:pro 1 MS----RNKTR---RAARAASAHVRTANT-DAPTEHHTDRAAQAEVFSFGDPVEVLDRRELLDYVECMRMGQWYEPPMPW 72 (368) Q Consensus 1 m~----~~k~~---~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 72 (368) ++ +++.+ -.++-...|...... ....... +... +..+-|-.+ .+. ..+-....|+.+ T Consensus 49 i~~~~~~~~~r~~~l~~Yy~g~~~il~~~~~~~~~~~----~~~k-i~~n~~k~I------v~~----~~~yl~g~p~~~ 113 (511) T protein:vir:96 49 IEHHMDYQRPRLKVLSDYYEGKTKNLVELTRRKEEYM----ADNR-VAHDYASYI------SDF----INGYFLGNPIQY 113 (511) T ss_pred HHHHHHhhhHHHHHHHHHhhccCccccccCccccccc----Ccce-eecchHHHH------HHH----HhhhhcccCcee Confidence 11 11100 011111111100000 0000000 0000 011111111 010 011112223322 Q ss_pred HHHHHHHHhcccccchhhhccchHHhh-ccCCCCcCHHHHHHHHHhHhhhCCeeEEEEecCCcceEEEEEeccccccccc Q lcl|Aclame:pro 73 DGLARSFRAAAHHSSAVYVKRNILVST-FIPHPLLSRATFERLVLDWQVFGNAYLERRENVLGGTIRLDTPLAKYVRRGL 151 (368) Q Consensus 73 ~~l~~~~r~~~~~~~~~~~~~~~~l~~-~~~n~~~~~~~~~~~~~~~ll~Gnay~~i~r~~~G~~~~L~~l~p~~v~~~~ 151 (368) .+ .. .+....+.. +.-| .-......+..+++.+|.||.++.++.+|++ .+..++|..+.+.. T Consensus 114 ~~---------~d-----~~~~~~l~~~~~~n--~~~~~~~~~~~~~~~~G~a~~~vy~d~dg~~-~i~~~~p~~~~~v~ 176 (511) T protein:vir:96 114 QD---------DD-----KDVLEAIEAFNDLN--DVESHNRSLGLDLSIYGKAYELMIRNQDDET-RLYKSDAMSTFIIY 176 (511) T ss_pred ec---------Cc-----hHHHHHHHHHHhhc--ChhHHHHHHHHHHHhcCeeEEEEEeCCCCce-EEEEEcccceEEEE Confidence 10 00 000111111 1111 1223455677889999999999999888864 56777777765544 Q ss_pred CCC---------eeEEEeC-C-c--e----EEEEcCccEEEecCCCC-------------------------cCCccccc Q lcl|Aclame:pro 152 DLN---------TYFFVQN-W-Q--Q----PYTFAAGSVFHLQEPDI-------------------------NQEVYGLP 189 (368) Q Consensus 152 ~~~---------~~~~~~~-~-~--~----~~~~~~~dviH~r~~~~-------------------------~~~~~G~s 189 (368) +.. .||.... + + . ...+.++.+.++...+. .+.-.|.| T Consensus 177 dd~~~~~~~~~vr~~~~~~~~~~~~~~~~~~~vyt~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~vPvv~~~n~~~g~g 256 (511) T protein:vir:96 177 DNTVERNSIAGVRYLRTKPIDKTDEDEVFTVDLFTSHGVYRYLTNRTNGLKLTPRENSFESHSFERMPITEFSNNERRKG 256 (511) T ss_pred cCCCCCceEEEEEEEEeeeccccccceEEEEEEEeCCcEEEEEecCCCcccccccccccccCcCcccceEEecCCCCCCC Confidence 321 1222110 0 0 0 12334444444421110 01124677 Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHhccCCCceeEEeCCCCccHHHHHHHHHHHHHhcccccccccccccc--Ccccccccc Q lcl|Aclame:pro 190 EYLSALNATWLNESATLFRRRYYKNGSHAGFILYMTDAAQKQEDVDTLREAMKSAKGPGNFRNLFMYAP--NGKKDGIQL 267 (368) Q Consensus 190 pi~~a~~~i~~~~~a~~~~~~~f~ng~~p~gil~~~~~~l~~e~~~~~k~~~~~~~g~~n~~~~~~l~~--~g~~~g~~~ 267 (368) -+.-....|.....+..-..+.+...+.|-.+++ .....++++.+..+...- -+......... ...+.+.++ T Consensus 257 d~e~v~~liDa~~~~~S~~~~~~~~~~~~~lv~~-G~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~ 330 (511) T protein:vir:96 257 DYEKVITLIDLYDNAESDTANYMSDLNDAMLLIK-GNLNLDPVEVRKQKEANV-----LFLEPTVYVDAEGRETEGSVDG 330 (511) T ss_pred chhhhHHHHHHHHHHHHHHHHHHHHhhcchhhee-cCccCCchhhcccccccc-----eeccccceeccccccCCCCcce Confidence 6666655555444444444444444455655554 212233333222221100 00000000000 011223344 Q ss_pred ccccchhhHHHHHHHHHHHHHHHHHHhCCChHHhcccccccccccCHHHHHHHHH---------------HHHHHHHHHH Q lcl|Aclame:pro 268 LPVSEVAAKDEFWNIKNVTRDDQLAAHRVPPQLMGIIPNNTGGFGDVEKAAMVFA---------------RNEVKPLQDR 332 (368) Q Consensus 268 ~pl~~~~~d~qf~e~~~~~~~~Ia~~fgVPp~~lg~~~~~~~~~sn~e~~~~~f~---------------~~tl~P~~~~ 332 (368) +.++.......+.+..+...+.|+..-++|....+...+ |.......+. ...|.-.++. T Consensus 331 ~~l~~~~~~~~~e~~~~~L~~~I~~~s~~P~~~~~~~~~------n~Sg~Al~~~~~~l~~ka~~~~~~f~~~l~~~~~l 404 (511) T protein:vir:96 331 GYIYKQYDVQGTEAYKDRLNSDIHMFTNTPNMKDDNFSG------TQSGEAMKYKLFGLEQRTKTKEGLFTKGLRRRAKL 404 (511) T ss_pred eEEeecCCHHHHHHHHHHHHHHHHHHhCCcccccccccc------ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Confidence 444444445666777888899999999999765543221 2212222221 1122222222 Q ss_pred HHHHHhhcCc-----ce--EeechhhhhcCChhhhhhhhhhcC Q lcl|Aclame:pro 333 LLAINDWIGD-----EV--VRFAPYALGGHDQPAAAPGGQRSA 368 (368) Q Consensus 333 ie~l~~~l~~-----~~--~~F~~~~Llr~D~~~ra~~~~~~~ 368 (368) |.++-...+. ++ +++.+..-+--|.+..++...+++ T Consensus 405 i~~~~~~~~~~~~~~~~~~i~~~f~~~~p~n~~e~~d~~~kl~ 447 (511) T protein:vir:96 405 LETILKNTRSIDANKDFNTVRYVYNRNLPKSLIEELKAYIDSG 447 (511) T ss_pred HHHHHHhcCCCccccccccceEEeCCCCCcCHHHHHHHHHHHh Confidence 2111111110 11 233322333345555566555555 No 184 >protein:vir:99072 Length: 479 # NCBI annotation: gp27 # Family: family:all:524 # MgeID: mge:1671 # MgeName: Wildcat # Cross-refs: genbank:acc:YP_655892;genbank:gi:109521464;genbank:GeneID:4158037 Probab=83.96 E-value=0.064 Score=27.12 Aligned_cols=300 Identities=11% Similarity=0.003 Sum_probs=114.5 Q ss_pred EEECCCceeccChHHHHHHHH--HHhccchh-cccccHHHHHHHHHhc------------------------ccccchhh Q lcl|Aclame:pro 38 VFSFGDPVEVLDRRELLDYVE--CMRMGQWY-EPPMPWDGLARSFRAA------------------------AHHSSAVY 90 (368) Q Consensus 38 ~~~~g~p~~~~~~~~~~~~~~--~~~~~~~~-~~p~~~~~l~~~~r~~------------------------~~~~~~~~ 90 (368) ++.+ |..-++.-.+..++. |++. +. ..| .+..+..+++.. .+...++. T Consensus 1 ~~~~--p~~~l~~~~~~~~~~~~l~~~--~~~~~~-r~~~~~~YY~g~~~i~~~~~~~~~~~~~~~~~~~~~n~~~~iVd 75 (479) T protein:vir:99 1 MIDL--PDEDLSSEGLAKYLETKVFPK--MNTECE-RLDDFEAWTKNGQEVPDLATRHKNKEREVLQQLSRKPWMGLMVN 75 (479) T ss_pred CccC--CcccCChhHHHHHHHHHHHHH--HHHHhH-HHHHHHHHHhcCCcccccccccCChhHHHHHHHhhcCcHHHHHH Confidence 3333 433344333322221 1100 00 000 000111111111 01000000 Q ss_pred hccchHHhhccCCCCc------------------CHHHHHHHHHhHhhhCCeeEEEEe-----cCCcceEEEEEeccccc Q lcl|Aclame:pro 91 VKRNILVSTFIPHPLL------------------SRATFERLVLDWQVFGNAYLERRE-----NVLGGTIRLDTPLAKYV 147 (368) Q Consensus 91 ~~~~~~l~~~~~n~~~------------------~~~~~~~~~~~~ll~Gnay~~i~r-----~~~G~~~~L~~l~p~~v 147 (368) . ......+++.. -......++.+.+.+|.||.++.. +..|.+ .+..++|..+ T Consensus 76 ~----~~~~l~~~gf~~~d~~~~~~~~~i~~~N~~d~~~~~~~~~a~~~G~af~~v~~~~~~~d~~g~~-~i~~~~p~~~ 150 (479) T protein:vir:99 76 S----FAQQLIVDGYRKTGTNENAKGWDTWRLNQMDKQQFWLNRAVLTFGYAFIKVTSGISPLDGTTVA-RIKCIDPRDA 150 (479) T ss_pred H----HHhhcccccccCCCchhhHHHHHHHHhcChhHHHHHHHHHHhhcCceEEEEecCCCCcCCCCce-EEEEechhhe Confidence 0 00001121111 012233456788899999998874 334443 4666677766 Q ss_pred ccccCCCe------eEEE-------------------eCCceEEEEc-----Cc--cEEEecCCCCcCCccccchhhHHH Q lcl|Aclame:pro 148 RRGLDLNT------YFFV-------------------QNWQQPYTFA-----AG--SVFHLQEPDINQEVYGLPEYLSAL 195 (368) Q Consensus 148 ~~~~~~~~------~~~~-------------------~~~~~~~~~~-----~~--dviH~r~~~~~~~~~G~spi~~a~ 195 (368) ....+... |... ..++...... -+ .|+||++..-. .-+|.|.+.... T Consensus 151 ~~iydd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~g~vPvv~f~n~~~~-~~~g~sd~e~v~ 229 (479) T protein:vir:99 151 FAIWEDPYWDEWPKYLLERQPNGQYWWWTEEDYSIFEFKQGKFIYRETVSHDYGHIPFVRYVNVMDL-RGVCYGDVEPLV 229 (479) T ss_pred EEEecCCcccceeeEEEeecCceeEEEEecceEEEEEecCCceeeccccccCCCCcceEEeecCCCc-CcCCcchhHHHH Confidence 54332110 1100 0111111000 01 25666643222 236888777666 Q ss_pred HHHHHHHHHHHHHHHHHhccCCCceeEEeCCCCccHHHHHHHHHHHHHhccccccccccccccCccccccccccccchhh Q lcl|Aclame:pro 196 NATWLNESATLFRRRYYKNGSHAGFILYMTDAAQKQEDVDTLREAMKSAKGPGNFRNLFMYAPNGKKDGIQLLPVSEVAA 275 (368) Q Consensus 196 ~~i~~~~~a~~~~~~~f~ng~~p~gil~~~~~~l~~e~~~~~k~~~~~~~g~~n~~~~~~l~~~g~~~g~~~~pl~~~~~ 275 (368) ..+.....+..-......-.+.|-.+|. +..+.++.... ...|.. ..++.+.+. +.+.++..+.... T Consensus 230 ~liDa~~~~~s~~~~~~~~~a~p~~~i~--G~~~~~~~~~~-~~~~~~-----~~~~i~~~~----~~~~~~~q~~~~~- 296 (479) T protein:vir:99 230 TVAKAIDKTGLDILLVQHHQSFQIRWAT--GLMLPEGANAD-QEKMRF-----AQESMLISQ----NEKASFGAIPAAP- 296 (479) T ss_pred HHHHHHHHHHHHHHHHHHHhhchhhhhc--CCCcccccccc-hhcccc-----ccccceeec----CCCceEEEecccc- Confidence 5555544444444444444455655553 22222211110 111211 112233222 2345555443221 Q ss_pred HHHHHHHHHHHHHHHHHHhCCChHHhcccccccccccCHHHHHHHHHHHHHHHHHHHH--------HHHHhh----cC-- Q lcl|Aclame:pro 276 KDEFWNIKNVTRDDQLAAHRVPPQLMGIIPNNTGGFGDVEKAAMVFARNEVKPLQDRL--------LAINDW----IG-- 341 (368) Q Consensus 276 d~qf~e~~~~~~~~Ia~~fgVPp~~lg~~~~~~~~~sn~e~~~~~f~~~tl~P~~~~i--------e~l~~~----l~-- 341 (368) -..|++..+..+.+|+..=++|++.+|...+ .......+....|.-.+... +++.+. .+ T Consensus 297 ~~~~~~~l~~~i~~i~~~t~~p~~~~g~~~n-------~Sg~Al~~~~~~l~~ka~~~~~~f~~al~~~~~l~~~~~~~~ 369 (479) T protein:vir:99 297 LDGLLNAYKESLLEFLALAQLPPHIAGQIVN-------VAADALAAGTRQTMQKLFEKQATWKASHNQTMRLVNKIEGRT 369 (479) T ss_pred hHHHHHHHHHHHHHHhccCCCCHHHcccccc-------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC Confidence 1347788888888999999999999985422 11222222222222222111 111111 11 Q ss_pred --cc--eEeechhhhhcCChhhhhhhhhhc--C Q lcl|Aclame:pro 342 --DE--VVRFAPYALGGHDQPAAAPGGQRS--A 368 (368) Q Consensus 342 --~~--~~~F~~~~Llr~D~~~ra~~~~~~--~ 368 (368) .. -+++......--+.+..|+...+. | T Consensus 370 ~~~~~~~i~~~w~~~~~~s~~~~ad~~~kl~~a 402 (479) T protein:vir:99 370 EEATDLDFTITWQDVTIQSLAQFADAWAKMVES 402 (479) T ss_pred ccccceeeeEEecCCCCCCHHHHHHHHHHHHhc Confidence 11 122221111122344455544442 2 No 185 >protein:vir:9306 Length: 511 # NCBI annotation: phi Mu50B-like protein # Family: family:all:125 # MgeID: mge:165 # MgeName: phi 11 # Cross-refs: genbank:acc:NP_803284;genbank:gi:29028594;genbank:GeneID:1258040 Probab=82.68 E-value=0.075 Score=26.76 Aligned_cols=327 Identities=13% Similarity=0.042 Sum_probs=124.3 Q ss_pred CCc----CCCC---cccccccccccccc-CCCcchhhccccCceEEEECCCceeccChHHHHHHHHHHhccchhcccccH Q lcl|Aclame:pro 1 MSR----NKTR---RAARAASAHVRTAN-TDAPTEHHTDRAAQAEVFSFGDPVEVLDRRELLDYVECMRMGQWYEPPMPW 72 (368) Q Consensus 1 m~~----~k~~---~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 72 (368) +++ ++.+ -.++-...|.-... ...+.... +... +..+-|.. +.+. ..+-....|+.+ T Consensus 49 i~~~~~~~~~r~~~l~~Yy~g~~~il~~~~~~~~~~~----~~~k-i~~n~~k~------Iv~~----~~~yl~g~p~~~ 113 (511) T protein:vir:93 49 IEHHMDYQRPRLKVLSDYYEGKTKNLVELTRRKEEYM----ADNR-VAHDYASY------ISDF----INGYFLGNPIQY 113 (511) T ss_pred HHHHHHhhHHHHHHHHHHhcccCccccccCcCccccc----Ccce-eecchHHH------HHHH----HhhhhcccCeee Confidence 111 1100 00111111100000 00000000 0000 00111111 1110 011122233322 Q ss_pred HHHHHHHHhcccccchhhhccchHHhhccCCCCcCHHHHHHHHHhHhhhCCeeEEEEecCCcceEEEEEecccccccccC Q lcl|Aclame:pro 73 DGLARSFRAAAHHSSAVYVKRNILVSTFIPHPLLSRATFERLVLDWQVFGNAYLERRENVLGGTIRLDTPLAKYVRRGLD 152 (368) Q Consensus 73 ~~l~~~~r~~~~~~~~~~~~~~~~l~~~~~n~~~~~~~~~~~~~~~ll~Gnay~~i~r~~~G~~~~L~~l~p~~v~~~~~ 152 (368) .+ +- .+....+..+ .+-+.-......+..+.+.+|.||.++.++.+|++ .+..++|..+.+..+ T Consensus 114 ~~-----------~d---~~~~~~l~~~-~~~n~~~~~~~~~~~~~~~~G~ay~~vy~de~~~~-~i~~~~p~~~~~vyd 177 (511) T protein:vir:93 114 QD-----------DD---KDVLEVIEAF-NDLNDVESHNRSLGLDLSIYGKAYELMIRNQDDET-RLYKSDAMSTFVIYD 177 (511) T ss_pred cc-----------CC---hHHHHHHHHH-HhhcCHhHHHHHHHHHHHhcCeeEEEEEeCCCCce-EEEEEccceeEEEEc Confidence 10 00 0001111111 11111224556677889999999999999888864 467778877765433 Q ss_pred C----Ce-----eEEEe--CC---ce---EEEEcCccEEEecCCCC-------------------------cCCccccch Q lcl|Aclame:pro 153 L----NT-----YFFVQ--NW---QQ---PYTFAAGSVFHLQEPDI-------------------------NQEVYGLPE 190 (368) Q Consensus 153 ~----~~-----~~~~~--~~---~~---~~~~~~~dviH~r~~~~-------------------------~~~~~G~sp 190 (368) . .. ||.+. .+ +. ...+.++.|.+++.... .+.-.|.|. T Consensus 178 d~~~~~~~~~vr~~~~~~~~~~~~~~~~~~~iyt~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~vPvv~~~nn~~g~gd 257 (511) T protein:vir:93 178 NTIERNSIAGVRYLRTKPIDKTDEDEVFTVDLFTSHGVYRYLTSRTNGLKLTPRENGFESHSFERMPITEFSNNERRKGD 257 (511) T ss_pred CCCCCceEEEEEEEEeeeccccccceEEEEEEEeCCcEEEEEecCCCccccccccccccccCCCccceEEecCCCCCCCc Confidence 2 11 22111 00 00 11334444444321110 011246777 Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhccCCCceeEEeCCCCccHHHHHHHHHHHHHhccccccccccccccCccccccccccc Q lcl|Aclame:pro 191 YLSALNATWLNESATLFRRRYYKNGSHAGFILYMTDAAQKQEDVDTLREAMKSAKGPGNFRNLFMYAPNGKKDGIQLLPV 270 (368) Q Consensus 191 i~~a~~~i~~~~~a~~~~~~~f~ng~~p~gil~~~~~~l~~e~~~~~k~~~~~~~g~~n~~~~~~l~~~g~~~g~~~~pl 270 (368) +......|.....+..-..+.+...+.|-.+++ .....+++.....++...- .... .........+.+.+.+++.+ T Consensus 258 ~e~v~~liDa~d~~~S~~~~~~~~~~~~~lv~~-G~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~~~l 333 (511) T protein:vir:93 258 YEKVITLIDLYDNAESDTANYMSDLNDAMLLIK-GNLNLDPVEVRKQKEANVL-FLEP--TVYADSEGRETEGSVDGGYI 333 (511) T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHhhCcceeee-cCcccCchhhcccccccce-eccc--ccccccccccCCCCcceeEE Confidence 776666666555555555555565566666654 2122233332222211000 0000 00000000011234444445 Q ss_pred cchhhHHHHHHHHHHHHHHHHHHhCCChHHhcccccccccccCHHHHHHHHH---------------HHHHHHHHHHHHH Q lcl|Aclame:pro 271 SEVAAKDEFWNIKNVTRDDQLAAHRVPPQLMGIIPNNTGGFGDVEKAAMVFA---------------RNEVKPLQDRLLA 335 (368) Q Consensus 271 ~~~~~d~qf~e~~~~~~~~Ia~~fgVPp~~lg~~~~~~~~~sn~e~~~~~f~---------------~~tl~P~~~~ie~ 335 (368) +....+..+....+...+.|...-++|..-.+...+ |.......+. ...|.-.++.|.+ T Consensus 334 ~~~~~~~~~~~~~~~L~~~I~~~s~~P~~~~~~~~~------n~Sg~Al~~~~~~l~~k~~~k~~~f~~~l~~~~~li~~ 407 (511) T protein:vir:93 334 YKQYDVQGTEAYKDRLNSDIHMFTNTPNMKDDNFSG------TQSGEAMKYKLFGLEQRTKTKEGLFTKGLRRRAKLLET 407 (511) T ss_pred eecCCHHHHHHHHHHHHHHHHHHhCCcccccccccc------cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Confidence 544445566777788899999999999765432222 2212222222 2222222222211 Q ss_pred HHhhcC-----cc--eEeechhhhhcCChhhhhhhhhhcC Q lcl|Aclame:pro 336 INDWIG-----DE--VVRFAPYALGGHDQPAAAPGGQRSA 368 (368) Q Consensus 336 l~~~l~-----~~--~~~F~~~~Llr~D~~~ra~~~~~~~ 368 (368) +-...+ .+ -+++.+..-+--|.+..++...+.+ T Consensus 408 ~l~~~~~~~~~~d~~~i~~~f~~~~p~n~~e~~~~~~kl~ 447 (511) T protein:vir:93 408 ILKNTWSIDANKDFNTVRYVYNRNLPKSLIEELKAYIDSG 447 (511) T ss_pred HHHhccCcccccccccceEEeCCCCCCCHHHHHHHHHHHh Confidence 100001 01 1333333333345666666555655 No 186 >protein:vir:96839 Length: 474 # NCBI annotation: ORF008 # Family: family:all:125 # MgeID: mge:1642 # MgeName: EW # Cross-refs: genbank:acc:YP_240152;genbank:gi:66395815;genbank:GeneID:5133180 Probab=81.13 E-value=0.089 Score=26.36 Aligned_cols=317 Identities=10% Similarity=0.084 Sum_probs=114.9 Q ss_pred CCcCCCCccccccccccccccCCCcchhhccccCceEEEECCCceeccChHHHHHHHH-HH--hccchhcccccHHHHHH Q lcl|Aclame:pro 1 MSRNKTRRAARAASAHVRTANTDAPTEHHTDRAAQAEVFSFGDPVEVLDRRELLDYVE-CM--RMGQWYEPPMPWDGLAR 77 (368) Q Consensus 1 m~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~-~~--~~~~~~~~p~~~~~l~~ 77 (368) +++-+.+.++...-..-=...+.+..... ...+.... .+... .++-...+.. ++ ..+-....|+.+.+ T Consensus 35 i~~~~~~~~~~~~~~~Yy~g~~~i~~~~~-~~~~~~~~----~~~~~-~~ki~~n~~~~Ivd~~~~~l~g~p~~~~~--- 105 (474) T protein:vir:96 35 INDHKPKIDDITVGERYYNHDPDVLRLAP-KLDNKGEI----DPLKP-DWRMFTNYHQNLVDQKVAYAVANPVTFSS--- 105 (474) T ss_pred HHHHHHHHHHHHHHHHHhccCCcchhccc-hhcccccc----ccccc-chhcccchHHHHHHhhhhhhcccCceeec--- Confidence 11100000000000000000000000000 00000000 00000 0000000000 00 01112222332210 Q ss_pred HHHhcccccchhhhccchHHhhccCCCCcCHHHHHHHHHhHhhhCCeeEEEEecCCcceEEEEEecccccccccCCC--- Q lcl|Aclame:pro 78 SFRAAAHHSSAVYVKRNILVSTFIPHPLLSRATFERLVLDWQVFGNAYLERRENVLGGTIRLDTPLAKYVRRGLDLN--- 154 (368) Q Consensus 78 ~~r~~~~~~~~~~~~~~~~l~~~~~n~~~~~~~~~~~~~~~ll~Gnay~~i~r~~~G~~~~L~~l~p~~v~~~~~~~--- 154 (368) .. .+....+..+..|. .......+..+.+.+|.+|..+..+.+|++ .+..++|..+.+..+.. T Consensus 106 ------~d-----~~~~~~l~~~~~n~--~~~~~~~~~~~~~~~G~~~~~~y~d~~~~~-~i~~~~p~~~~~v~d~~~~~ 171 (474) T protein:vir:96 106 ------DD-----DKSLKTIQEVLNHK--WDDKLVDILTAASNKGIEWLQPYIDENGEF-KTFRVPAEQAIPIWTNKERD 171 (474) T ss_pred ------Cc-----hHHHHHHHHHHhcC--HHHHHHHHHHHHHhcCeeEEEEEecCCCce-EEEEEcccceEEEEcCCCCC Confidence 00 00111111111221 123345566788899999999998888875 47777777766543321 Q ss_pred -e-----eEEEeCCceEEEEcCcc---------------------------------------EEEecCCCCcCCccccc Q lcl|Aclame:pro 155 -T-----YFFVQNWQQPYTFAAGS---------------------------------------VFHLQEPDINQEVYGLP 189 (368) Q Consensus 155 -~-----~~~~~~~~~~~~~~~~d---------------------------------------viH~r~~~~~~~~~G~s 189 (368) . +|..........+..+. |+||++ ...|.| T Consensus 172 ~~~~~vr~~~~~~~~~~~~yt~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iPvv~~~n-----n~~g~s 246 (474) T protein:vir:96 172 TLKAFIRYYRLDGAERVEYWTDSDVTYYEYQDGILIPDYYHGEEHIQSHYYVGNKRVSWGRVPFIPFKN-----NPQEMS 246 (474) T ss_pred ceEEEEEEEeecCceEEEEEeCCeEEEEEecCCceeeccccccccccccccccccccCCCceeEEEecc-----CCCCCC Confidence 0 11111111111122222 333332 124677 Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHhccCCCceeEEeCCCCccHHHHHHHHHHHHHhccccccccccccccCcccccccccc Q lcl|Aclame:pro 190 EYLSALNATWLNESATLFRRRYYKNGSHAGFILYMTDAAQKQEDVDTLREAMKSAKGPGNFRNLFMYAPNGKKDGIQLLP 269 (368) Q Consensus 190 pi~~a~~~i~~~~~a~~~~~~~f~ng~~p~gil~~~~~~l~~e~~~~~k~~~~~~~g~~n~~~~~~l~~~g~~~g~~~~p 269 (368) .+......+.....+..-..+.+...+.|-.+++ +..+. +...+...++ ..+++.+... ..+++ . T Consensus 247 d~e~v~~liDa~d~~~S~~~~~~~~~~~~~lv~~--g~~~~--~~~~~~~~~~-------~~~~i~~~~~--~~~~~--~ 311 (474) T protein:vir:96 247 DLFMYKTIIDAMDKRLSDTQNTFDESTELIYILK--GYEGQ--DLDEFMRNLK-------YYKAINVDGD--GSGVD--T 311 (474) T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHhccceeeee--cCCcc--cccchhhhhh-------cCceEEecCC--CCcee--E Confidence 7766666665555555555555566666655553 33222 1111111121 2233433221 12344 3 Q ss_pred ccchhhHHHHHHHHHHHHHHHHHHhCCChHHhcccccccccccCHHHHHHHHHHHHHHHHHHH--------HHHHH---- Q lcl|Aclame:pro 270 VSEVAAKDEFWNIKNVTRDDQLAAHRVPPQLMGIIPNNTGGFGDVEKAAMVFARNEVKPLQDR--------LLAIN---- 337 (368) Q Consensus 270 l~~~~~d~qf~e~~~~~~~~Ia~~fgVPp~~lg~~~~~~~~~sn~e~~~~~f~~~tl~P~~~~--------ie~l~---- 337 (368) ++.......+.+..+...+.|+..-++|..-.+-. .+|.....+.+....+.-.+.. |.++. T Consensus 312 l~~~~~~~~~~~~~~~l~~~i~~~s~~p~~~~~~~------~~n~Sg~Al~~~~~~l~~k~~~k~~~~~~~l~~~~~~i~ 385 (474) T protein:vir:96 312 IQIEVPVQSSKEYLDMLRDYVIEFGQGVDFQQDKF------GNSPSGIALKFMYSNLDLKANKLKNKTLTALQELLQYII 385 (474) T ss_pred EeecCChHHHHHHHHHHHHHHHHHhCCcccccccc------ccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Confidence 44333455667777888999999999996543211 1122222222222211111111 11111 Q ss_pred hhcCcc------eEeechhhhhcCChhhhhhhhhhcC Q lcl|Aclame:pro 338 DWIGDE------VVRFAPYALGGHDQPAAAPGGQRSA 368 (368) Q Consensus 338 ~~l~~~------~~~F~~~~Llr~D~~~ra~~~~~~~ 368 (368) ..++.. -+.|+... --|....++....+. T Consensus 386 ~~~~~~~~~~~i~i~f~~~~--p~~~~e~~~~~~~ag 420 (474) T protein:vir:96 386 DFYKLNIKVQDVEITFNFNV--MVNELEQSQIGVQSQ 420 (474) T ss_pred HHhCCCcccceeeEEeccCC--CcCHHHHHHHHHhcC Confidence 112221 14564332 123334444332222 No 187 >protein:vir:2341 Length: 488 # NCBI annotation: gp11 # Family: family:all:524 # MgeID: mge:51 # MgeName: Bxb1 # Cross-refs: genbank:acc:NP_075278;genbank:gi:12657865;genbank:GeneID:920078 Probab=81.10 E-value=0.089 Score=26.35 Aligned_cols=321 Identities=11% Similarity=0.040 Sum_probs=106.0 Q ss_pred CCcCCCCccccccccccccccCCCcchhhccccCceEEEECCCceeccChHHH-HH-HHHHHh-ccchhcccccHHHHHH Q lcl|Aclame:pro 1 MSRNKTRRAARAASAHVRTANTDAPTEHHTDRAAQAEVFSFGDPVEVLDRREL-LD-YVECMR-MGQWYEPPMPWDGLAR 77 (368) Q Consensus 1 m~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~-~~-~~~~~~-~~~~~~~p~~~~~l~~ 77 (368) +.+.+....=+..+...+-.+...+... ..... +.+.... .+ +..... .|-....|+... T Consensus 24 ~~r~~~~~~Yy~g~~~i~~~~~~~~~~~-----~~~~~--------~~n~~~~ivd~~a~~l~~~Gf~~~~~~~~~---- 86 (488) T protein:vir:23 24 QNELKSSKAYYDAERRPDAIGLAVPLDM-----RKYLA--------HVGYPRTYVDAIAERQELEGFRIPSANGEE---- 86 (488) T ss_pred HHHHHHHHHHHhcccchhhcCcccchhh-----hhhhh--------hcchHHHHHHHHHHhhhccceeccCCcccc---- Confidence 1111100000011100000000000000 00000 1111100 00 000000 010000010000 Q ss_pred HHHhcccccchhhhccchHHhhccCCCCcCHHHHHHHHHhHhhhCCeeEEEEecC--------CcceEEEEEeccccccc Q lcl|Aclame:pro 78 SFRAAAHHSSAVYVKRNILVSTFIPHPLLSRATFERLVLDWQVFGNAYLERRENV--------LGGTIRLDTPLAKYVRR 149 (368) Q Consensus 78 ~~r~~~~~~~~~~~~~~~~l~~~~~n~~~~~~~~~~~~~~~ll~Gnay~~i~r~~--------~G~~~~L~~l~p~~v~~ 149 (368) .... + ..+....+ ......+.-......+..+.+.+|.||..+.++. .|. ..+.+++|..+.+ T Consensus 87 --~~~~-~----d~~~~~~l-~~i~~~N~~~~~~~~~~~~a~i~G~a~~~v~~~~~~~~~~~~~~~-~~i~~~~p~~~~~ 157 (488) T protein:vir:23 87 --PESG-G----ENDPASEL-WDWWQANNLDIEATLGHTDALIYGTAYITISMPDPEVDFDVDPEV-PLIRVEPPTALYA 157 (488) T ss_pred --cccc-c----chhHHHHH-HHHHHhcChhHHHHHHHHHHhhcCceEEEEecCCcccccCCCCCc-ceEEEeccceeEE Confidence 0000 0 00000001 1111111122455667788999999999987643 222 2355667766554 Q ss_pred ccCCC---e-----eEEEeCCceE---EEEcCc-------------------------cEEEecCCCCcCCccccchhh- Q lcl|Aclame:pro 150 GLDLN---T-----YFFVQNWQQP---YTFAAG-------------------------SVFHLQEPDINQEVYGLPEYL- 192 (368) Q Consensus 150 ~~~~~---~-----~~~~~~~~~~---~~~~~~-------------------------dviH~r~~~~~~~~~G~spi~- 192 (368) ..+.. . ||+...++.. ..+.++ .|+||++..-..+.+|.|-|. T Consensus 158 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~h~~g~vPvv~f~n~~~~~~~~G~s~i~~ 237 (488) T protein:vir:23 158 EVDPRTRKVLYAIRAIYGADGNEIVSATLYLPDTTMTWLRAEGEWEAPTSTPHGLEMVPVIPISNRTRLSDLYGTSEISP 237 (488) T ss_pred EEecCCCceEEEEEEEEecCCCcEEEEEEEecCcEEEEEecCCceEeccccccCCCCcceEEeccccccCCcCCccchhh Confidence 33211 0 1111111110 011111 256776443334667888654 Q ss_pred ---HHHHHHHHHHHHHHHHHHHHhccCCCceeEEeCCCCccHHHHH--HHHHHHHHhccccccccccccccCcccccccc Q lcl|Aclame:pro 193 ---SALNATWLNESATLFRRRYYKNGSHAGFILYMTDAAQKQEDVD--TLREAMKSAKGPGNFRNLFMYAPNGKKDGIQL 267 (368) Q Consensus 193 ---~a~~~i~~~~~a~~~~~~~f~ng~~p~gil~~~~~~l~~e~~~--~~k~~~~~~~g~~n~~~~~~l~~~g~~~g~~~ 267 (368) .+...+.....-..-...||. .|--+|. +..+++...+ .-...|+... ++++++. +| .+.++ T Consensus 238 ~v~~l~Da~~~~~s~~~~~~~~~a---~p~~~i~--G~~~~~~~~~~~~~~~~~~~~~-----~~v~~~~-~g--~~~~~ 304 (488) T protein:vir:23 238 ELRSVTDAAAQILMNMQGTANLMA---IPQRLIF--GAKPEELGINAETGQRMFDAYM-----ARILAFE-GG--EGAHA 304 (488) T ss_pred hHHHHHHHHHHHHHHHHHHHHHhh---hHHHHHh--CCCcccccccccccchhhhhhh-----hhhccCC-CC--CCcee Confidence 222333322221112222332 2333332 2111111110 0011222221 2333332 22 23455 Q ss_pred ccccchhhHHHHHHHHHHHHHHHHHHhCCChHHhcccccccccccCHHHHHHHHHHHHHHHHHHHHH--------HHHh- Q lcl|Aclame:pro 268 LPVSEVAAKDEFWNIKNVTRDDQLAAHRVPPQLMGIIPNNTGGFGDVEKAAMVFARNEVKPLQDRLL--------AIND- 338 (368) Q Consensus 268 ~pl~~~~~d~qf~e~~~~~~~~Ia~~fgVPp~~lg~~~~~~~~~sn~e~~~~~f~~~tl~P~~~~ie--------~l~~- 338 (368) ..+...+. ..|++..+..+.+|+..=++|++.+|....+. ++.+. +.+....|.-.+.+.+ ++.+ T Consensus 305 ~q~~~~~~-~~~~~~l~~~i~~~~~~~~~p~~~~g~~~~n~---~Sg~A--l~~~~~~l~~k~~~~~~~f~~~l~~~~~l 378 (488) T protein:vir:23 305 EQFSAAEL-RNFVDALDALDRKAASYSGLPPQYLSSSSDNP---ASAEA--IKAAESRLVKKVERKNKIFGGAWEQAMRL 378 (488) T ss_pred EecCCCCh-HHHHHHHHHHHHHHhcccCCCHHHhccccCcc---hHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHH Confidence 54443322 34888888899999999999999997543221 12222 2222222222111111 1111 Q ss_pred ---hcCc-----c----eEeechhhhhcCChhhhhhhhhhcC Q lcl|Aclame:pro 339 ---WIGD-----E----VVRFAPYALGGHDQPAAAPGGQRSA 368 (368) Q Consensus 339 ---~l~~-----~----~~~F~~~~Llr~D~~~ra~~~~~~~ 368 (368) .++. . .+.|.... --+....++...+.+ T Consensus 379 ~~~~~~~~~~~~~~~~i~v~f~~~~--~~s~~~~ada~~kl~ 418 (488) T protein:vir:23 379 AYKMVKGGDIPTEYYRMETVWRDPS--TPTYAAKADAAAKLF 418 (488) T ss_pred HHHHhcCCCcchhhccceEEecCCC--CCCHHHHHHHHHHHH Confidence 1111 1 13443111 112333333333321 No 188 >protein:vir:107112 Length: 478 # NCBI annotation: putative phage portal protein # Family: family:all:125 # MgeID: mge:1571 # MgeName: CNPH82 # Cross-refs: genbank:acc:YP_950601;genbank:gi:119953681;genbank:GeneID:4643121 Probab=80.96 E-value=0.09 Score=26.32 Aligned_cols=323 Identities=9% Similarity=0.020 Sum_probs=115.0 Q ss_pred CCcCCCCccccccccccccccCCCcchhhccccCceEEEECCCce-ec-cCh-HHHHHHHHHHhccchhcccccHHHHHH Q lcl|Aclame:pro 1 MSRNKTRRAARAASAHVRTANTDAPTEHHTDRAAQAEVFSFGDPV-EV-LDR-RELLDYVECMRMGQWYEPPMPWDGLAR 77 (368) Q Consensus 1 m~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~p~-~~-~~~-~~~~~~~~~~~~~~~~~~p~~~~~l~~ 77 (368) +++.+.+.++...-..-=.....+.... .......... -+.|. .+ .+. ..+.+. ..+-....|+.+.. T Consensus 35 i~~~~~~~~r~~~~~~Yy~g~~~i~~~~-~~~~~~~~~~-~~~~~~ki~~n~~k~ivd~----~~~yl~g~p~~~~~--- 105 (478) T protein:vir:10 35 VREHKENIDNITMGERYYNHHPDILDAP-FKRDVNGDYD-ETKPDWRMYTNYHQNLVDQ----KVAYAVANPVTFGV--- 105 (478) T ss_pred HHHHHHHHHHHHHHHHHhcccccccccc-hhhhcccccc-cccccceeccchHHHHHHH----HhhhhcccCceeec--- Confidence 1111111110000000000000000000 0000000000 00000 00 010 001110 01111222322110 Q ss_pred HHHhcccccchhhhccchHHhhccCCCCcCHHHHHHHHHhHhhhCCeeEEEEecCCcceEEEEEecccccccccCC---- Q lcl|Aclame:pro 78 SFRAAAHHSSAVYVKRNILVSTFIPHPLLSRATFERLVLDWQVFGNAYLERRENVLGGTIRLDTPLAKYVRRGLDL---- 153 (368) Q Consensus 78 ~~r~~~~~~~~~~~~~~~~l~~~~~n~~~~~~~~~~~~~~~ll~Gnay~~i~r~~~G~~~~L~~l~p~~v~~~~~~---- 153 (368) .. .+....+..+..|. .......++.+.+.+|.+|..+..+.+|++ .+..++|..+.+..+. T Consensus 106 ------~~-----~~~~~~l~~~~~n~--~~~~~~~~~~~~~~~G~~~~~v~~d~~~~~-~~~~~~p~~~~~v~d~~~~~ 171 (478) T protein:vir:10 106 ------DN-----DKALKQIQHTLNHK--WDDKLVDILTAASNKGIEWVQPYVDEEGEF-KTFRVPAEQAVPIWTNKERD 171 (478) T ss_pred ------CC-----hHHHHHHHHHHhcc--HHHHHHHHHHHHhhCCeEEEEEEecCCCce-EEEEEcccceEEEEcCCCCC Confidence 00 00111111111121 123445567888999999999988888764 5666777766544321 Q ss_pred Ce-----eEEEeCCceEEEEcCccEEEecCCC-------------------------C---------cCCccccchhhHH Q lcl|Aclame:pro 154 NT-----YFFVQNWQQPYTFAAGSVFHLQEPD-------------------------I---------NQEVYGLPEYLSA 194 (368) Q Consensus 154 ~~-----~~~~~~~~~~~~~~~~dviH~r~~~-------------------------~---------~~~~~G~spi~~a 194 (368) +. +|..........+.++.|.+++... + .+...|.|.+... T Consensus 172 ~~~~~ir~~~~~~~~~~~~y~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~vPvv~~~n~~~g~sd~e~v 251 (478) T protein:vir:10 172 ELQAFIRVYELDGAERVEYWTKDDVTFYELKEGQLIPDFYRSEDHIQPHYYQGNKLMSWGRVPFIPFKNNPQEVSDLFMY 251 (478) T ss_pred ceEEEEEEEeeeCceEEEEEeCCcEEEEEecCCeeeccccccccccccceecccccccCCcceEEEeccCCCCCCcHHHH Confidence 11 1111111111222333333221100 0 0112466666655 Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCceeEEeCCCCccHHHHHHHHHHHHHhccccccccccccccCccccccccccccchh Q lcl|Aclame:pro 195 LNATWLNESATLFRRRYYKNGSHAGFILYMTDAAQKQEDVDTLREAMKSAKGPGNFRNLFMYAPNGKKDGIQLLPVSEVA 274 (368) Q Consensus 195 ~~~i~~~~~a~~~~~~~f~ng~~p~gil~~~~~~l~~e~~~~~k~~~~~~~g~~n~~~~~~l~~~g~~~g~~~~pl~~~~ 274 (368) ...+.....+..-..+.+...+.|-.+++ +...++ .......++. .+.+.+.. ....+++| ++... T Consensus 252 ~~liDa~~~~~S~~~~~~~~~~~~~~~~~--g~~~~~--~~~~~~~~~~-------~~~~~~~~-~~~~~~~~--l~~~~ 317 (478) T protein:vir:10 252 KTIIDALDKRLSDTQNTFDESVELIYILK--GYEGED--MKDFMHNLKY-------YKAISVAG-ESGSGVDT--IKVEV 317 (478) T ss_pred HHHHHHHHHHHHHHHHHHHHhhCcceeee--cCCccc--ccchhhhhhh-------CceeEecC-CCCCcceE--EeecC Confidence 55555444333333333344445544443 322221 1111121221 12222211 11233444 34344 Q ss_pred hHHHHHHHHHHHHHHHHHHhCCChHHhcccccccccccCHHHHHHHHHHHHHHHHHHHH--------HH----HHhhcCc Q lcl|Aclame:pro 275 AKDEFWNIKNVTRDDQLAAHRVPPQLMGIIPNNTGGFGDVEKAAMVFARNEVKPLQDRL--------LA----INDWIGD 342 (368) Q Consensus 275 ~d~qf~e~~~~~~~~Ia~~fgVPp~~lg~~~~~~~~~sn~e~~~~~f~~~tl~P~~~~i--------e~----l~~~l~~ 342 (368) ....+.+..+...+.|...-++|..-.+-.. +|.....+.+....+.-.+... .+ +...++. T Consensus 318 ~~~~~~~~~~~l~~~I~~~s~~p~~~~~~~~------~n~Sg~Ai~~~~~~l~~k~~~~~~~~~~~l~~~~~li~~~~~~ 391 (478) T protein:vir:10 318 PIDSVKEYTKMLRDYIIEFGQGVDFQQDKFG------NSPSGIALKFMYSNLDLKANKLKNKTLTALQELLQYIIDFYRL 391 (478) T ss_pred CHHHHHHHHHHHHHHHHHHhCCcCcCccccc------cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC Confidence 5666777788889999999999864322111 1222222222222221111111 11 1122222 Q ss_pred c------eEeechhhhhcCChhhhhhhhhhcC Q lcl|Aclame:pro 343 E------VVRFAPYALGGHDQPAAAPGGQRSA 368 (368) Q Consensus 343 ~------~~~F~~~~Llr~D~~~ra~~~~~~~ 368 (368) . -+.|+.. +--|.+..++...+++ T Consensus 392 ~~d~~~i~i~f~~~--~p~~~~e~~~~~~~~~ 421 (478) T protein:vir:10 392 DVRVQDIEITFNFN--VMVNELENSQIAMNST 421 (478) T ss_pred CcccccceEEeCCC--CCCCHHHHHHHHHHHh Confidence 2 1455432 2235555666666656 No 189 >protein:vir:104082 Length: 485 # NCBI annotation: gp14 # Family: family:all:524 # MgeID: mge:1656 # MgeName: Che12 # Cross-refs: genbank:acc:YP_655593;genbank:gi:109392464;genbank:GeneID:4156950 Probab=79.86 E-value=0.1 Score=26.06 Aligned_cols=311 Identities=10% Similarity=0.005 Sum_probs=107.3 Q ss_pred ccCceEEEECCCceeccChHHHHHHH--------------HHHhccchhc--ccccHH-HHHHHHHhcccccchhhhccc Q lcl|Aclame:pro 32 RAAQAEVFSFGDPVEVLDRRELLDYV--------------ECMRMGQWYE--PPMPWD-GLARSFRAAAHHSSAVYVKRN 94 (368) Q Consensus 32 ~~~~~~~~~~g~p~~~~~~~~~~~~~--------------~~~~~~~~~~--~p~~~~-~l~~~~r~~~~~~~~~~~~~~ 94 (368) .+++...- ....+...+++.+ .-++.|.... .+.... .+........+...++. . T Consensus 1 ~~~~i~~~-----~~~~~~~~~~~~l~~~~~~~~~r~~~~~~Yy~G~~~i~~~~~~~~~~~~~~~~~~n~~~~ivd-~-- 72 (485) T protein:vir:10 1 MTAPLPGQ-----EEIEDPAIARDEMVSAFEDSTQNLKTNTSYYEAERRPEAIGVTVPIQMQSLLAHVGYPRLYVD-S-- 72 (485) T ss_pred CCCCCCCC-----CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchhcCCCCChhhhhhhhhcCcHHHHHH-H-- Confidence 11111000 0001111111111 0011121110 010000 00000000011111000 0 Q ss_pred hHHhhccCCCCc-------------------CHHHHHHHHHhHhhhCCeeEEEEecCCcc-------eEEEEEecccccc Q lcl|Aclame:pro 95 ILVSTFIPHPLL-------------------SRATFERLVLDWQVFGNAYLERRENVLGG-------TIRLDTPLAKYVR 148 (368) Q Consensus 95 ~~l~~~~~n~~~-------------------~~~~~~~~~~~~ll~Gnay~~i~r~~~G~-------~~~L~~l~p~~v~ 148 (368) ......++++. -......+..+.+.+|.||..+.++..+. ...+.+++|..+. T Consensus 73 -~~~~l~~~g~~~~~~~~~~~~~~~i~~~N~~d~~~~~~~~~a~i~G~ay~~v~~~e~~~~~~~~~~~~~i~~~~p~~~~ 151 (485) T protein:vir:10 73 -IAERQAVEGFRFGDADEADEELWQWWQANNLDIEAPLGYTDAYVHGRSYITISRPDPQIDLGWDPNTPIIRVEPPTRMY 151 (485) T ss_pred -HHhhhcccceecCCCchhHHHHHHHHHhcCHhHHHHHHHHHHhhcCceEEEEeeCCcccccccCCCeeEEEEEccceeE Confidence 00000112111 01223345667889999999999875432 2356777777765 Q ss_pred cccCCCe------e--EEEeCCce---EEEEcCc-------------------------cEEEecCCCCcCCccccchhh Q lcl|Aclame:pro 149 RGLDLNT------Y--FFVQNWQQ---PYTFAAG-------------------------SVFHLQEPDINQEVYGLPEYL 192 (368) Q Consensus 149 ~~~~~~~------~--~~~~~~~~---~~~~~~~-------------------------dviH~r~~~~~~~~~G~spi~ 192 (368) +..+... + ++...++. ...+.++ .|+||.+..-..+.+|.|-+. T Consensus 152 ~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~g~vPvv~~~n~~~~~~~~G~s~i~ 231 (485) T protein:vir:10 152 AEIDPRIGRVSKAIRVAYDAEGNEIQAATLYTPNDIFGWYRVENEWQEWFNNPHGLGVVPVVPIPNRTRLSDLYGTSEIT 231 (485) T ss_pred EEEcCCCCceeEEEEEEEeeCCCeEEEEEEEeCCeEEEEEEcCCceEEeccccCCCCcccEEEeccccccCCCCCccchh Confidence 4433210 0 00001111 0111121 256665433234567887654 Q ss_pred ----HHHHHHHHHHHHHHHHHHHHhccCCCceeEEeCCCCccHHHHH--HHHHHHHHhccccccccccccccCccccccc Q lcl|Aclame:pro 193 ----SALNATWLNESATLFRRRYYKNGSHAGFILYMTDAAQKQEDVD--TLREAMKSAKGPGNFRNLFMYAPNGKKDGIQ 266 (368) Q Consensus 193 ----~a~~~i~~~~~a~~~~~~~f~ng~~p~gil~~~~~~l~~e~~~--~~k~~~~~~~g~~n~~~~~~l~~~g~~~g~~ 266 (368) .+...+.....-..-...+|. .|--+|. +..+.+...+ .-...|+.. .+..+.+ ++ .+.+ T Consensus 232 ~~v~~liDa~~~~~s~~~~~~~~~a---~p~~~i~--G~~~~~~~~~~~~~~~~~~~~-----~~~i~~~-~~---~d~k 297 (485) T protein:vir:10 232 PELRSMTDAAARILMLMQATAELMG---VPQRLIF--GIKPEEIGVDPETGQTLFDAY-----LARILAF-ED---AEGK 297 (485) T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhc---chHHHHh--cCCcccccccccccchhhhhc-----ccceecc-CC---CCce Confidence 333333333322222233333 3444432 2111111100 001112221 1223332 11 2345 Q ss_pred cccccchhhHHHHHHHHHHHHHHHHHHhCCChHHhcccccccccccCHHHHHHH----------HHHHHHHHHHHHHHHH Q lcl|Aclame:pro 267 LLPVSEVAAKDEFWNIKNVTRDDQLAAHRVPPQLMGIIPNNTGGFGDVEKAAMV----------FARNEVKPLQDRLLAI 336 (368) Q Consensus 267 ~~pl~~~~~d~qf~e~~~~~~~~Ia~~fgVPp~~lg~~~~~~~~~sn~e~~~~~----------f~~~tl~P~~~~ie~l 336 (368) +..+....- .-|++..+..+.+|+..=++|++.+|....+.+++..+...... .+...|...++.+..+ T Consensus 298 ~~q~~~~~~-~~~~~~l~~~i~~~~~~~~~p~~~fg~~~~n~~Sg~Al~~~~~~l~~k~~~k~~~f~~~l~~~~~l~~~~ 376 (485) T protein:vir:10 298 IQQFSAAEL-ANFTNALDQIAKQVAAYTGLPPQYLSTAADNPASAEAIRAAESRLIKKVERKNSIFGGAWEEAMRLAYRM 376 (485) T ss_pred EEeecccch-HHHHHHHHHHHHHHhcccCCCHHHhccccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Confidence 544433221 23888888889999999999999987543211111111111111 1111122211111111 Q ss_pred Hhhc--Ccc--e--EeechhhhhcCChhhhhhhhhhcC Q lcl|Aclame:pro 337 NDWI--GDE--V--VRFAPYALGGHDQPAAAPGGQRSA 368 (368) Q Consensus 337 ~~~l--~~~--~--~~F~~~~Llr~D~~~ra~~~~~~~ 368 (368) .... ..+ - +.|.. -+--+.+..|+...+.. T Consensus 377 ~~~~~~~~~~~~i~v~w~~--~~~~~~~~~ada~~kl~ 412 (485) T protein:vir:10 377 MKGGDVPPDMLRMETVWRD--PSTPTYAAKADAASKLY 412 (485) T ss_pred hCCCCCcccceeeeEEecC--CCCCCHHHHHHHHHHHH Confidence 1100 011 1 34422 22223333444333321 No 190 >protein:vir:97171 Length: 512 # NCBI annotation: ORF006 # Family: family:all:125 # MgeID: mge:1654 # MgeName: 85 # Cross-refs: genbank:acc:YP_239722;genbank:gi:66394876;genbank:GeneID:5130904 Probab=79.49 E-value=0.1 Score=25.98 Aligned_cols=325 Identities=12% Similarity=0.002 Sum_probs=122.2 Q ss_pred CCcCCCC-ccc------ccccccccccc-CCCcchhhccccCceEEEECCCceeccChHHHHHHHHHHhccchhcccccH Q lcl|Aclame:pro 1 MSRNKTR-RAA------RAASAHVRTAN-TDAPTEHHTDRAAQAEVFSFGDPVEVLDRRELLDYVECMRMGQWYEPPMPW 72 (368) Q Consensus 1 m~~~k~~-~~~------~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 72 (368) |++-+.+ +++ +-...+.-... ........ .... +..+-|-. +.+. ..+-....|+.+ T Consensus 49 i~~~~~~~~~r~~~l~~YY~g~~~i~~~~~~~~~~~~----~~~k-i~~n~~k~------Ivd~----~~~yl~g~p~~~ 113 (512) T protein:vir:97 49 IEHHMDYQRPRLKVLSDYYEGKTKNLVELTRRKEEYM----ADNR-VAHDYASY------ISDF----INGYFLGNPIQC 113 (512) T ss_pred HHHHHHhhHHHHHHHHHHhcccCccccccCccccccc----Ccce-eecchHHH------HHHH----HhhhhcccCcee Confidence 1111100 000 00000000000 00000000 0000 00010100 0010 011112223322 Q ss_pred HHHHHHHHhcccccchhhhccchHHhhccCCCCcCHHHHHHHHHhHhhhCCeeEEEEecCCcceEEEEEecccccccccC Q lcl|Aclame:pro 73 DGLARSFRAAAHHSSAVYVKRNILVSTFIPHPLLSRATFERLVLDWQVFGNAYLERRENVLGGTIRLDTPLAKYVRRGLD 152 (368) Q Consensus 73 ~~l~~~~r~~~~~~~~~~~~~~~~l~~~~~n~~~~~~~~~~~~~~~ll~Gnay~~i~r~~~G~~~~L~~l~p~~v~~~~~ 152 (368) .. .. .+....+..+ .+-+.-......+..+.+.+|.+|..+.++.+|++ .+..++|..+.+..+ T Consensus 114 ~~---------~d-----~~~~~~l~~~-~~~n~~~~~~~~~~~~~~i~G~ay~~vy~ded~~~-~i~~~~p~~~~~iyd 177 (512) T protein:vir:97 114 QD---------DD-----KDVLEAIEAF-NDLNDVESHNRSLGLDLSIYGKAYELMIRNQDDET-RLYKSDAMSTFVIYD 177 (512) T ss_pred cc---------CC-----hHHHHHHHHH-HhhcCHHHHHHHHHHHHHhcCeEEEEEEeCCCCce-EEEEEcccceEEEEc Confidence 10 00 0000111111 11111224556677889999999999999888864 577788877765443 Q ss_pred CC---------eeEEEe-CC-c---e---EEEEcCccEEEecCCCC-------------------------cCCccccch Q lcl|Aclame:pro 153 LN---------TYFFVQ-NW-Q---Q---PYTFAAGSVFHLQEPDI-------------------------NQEVYGLPE 190 (368) Q Consensus 153 ~~---------~~~~~~-~~-~---~---~~~~~~~dviH~r~~~~-------------------------~~~~~G~sp 190 (368) .. .||.+. .+ + . ...+.++.|.++...+. .+.-.|.|. T Consensus 178 ~~~~~~~~~~vr~~~~~~~~~~~~~~~~~~~vyt~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~vPvv~~~nn~~~~gd 257 (512) T protein:vir:97 178 NTIERNSIAGVRYLRTKPIDKTDEDEVFTVDLFTSHGVYRYLTSRTNGLKLTPRENGFESHSFERMPITEFSNNERRKGD 257 (512) T ss_pred CCCCCceEEEEEEEEeeeccccccceEEEEEEEeCCcEEEEEecCCCcccccccccccccccCcccceEeecCCCCCCCc Confidence 21 022111 00 0 0 11334444444321100 001246777 Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhccCCCceeEEeCCCCccHHHHHHHHHHHHHh-ccccccccccccccCcccccccccc Q lcl|Aclame:pro 191 YLSALNATWLNESATLFRRRYYKNGSHAGFILYMTDAAQKQEDVDTLREAMKSA-KGPGNFRNLFMYAPNGKKDGIQLLP 269 (368) Q Consensus 191 i~~a~~~i~~~~~a~~~~~~~f~ng~~p~gil~~~~~~l~~e~~~~~k~~~~~~-~g~~n~~~~~~l~~~g~~~g~~~~p 269 (368) +......+.....+..-..+.+...+.|-.++.- ....+++.....+....-. ............. .+.|.+++. T Consensus 258 ~e~v~~liDa~d~~~S~~~~~~~~~~~~~lv~~G-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~d~~~ 333 (512) T protein:vir:97 258 YEKVITLIDLYDNAESDTANYMSDLNDAMLLIKG-NLNLDPVEVRKQKEANVLFLEPTVYENRDTGIE---TEGSVDGGY 333 (512) T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHhcCceeeeec-CccCCchhhhhhhhcccccccccchhhcccccC---CCCCcceEE Confidence 7766666665555554445555555666666642 1222333333222211100 0011111111111 123344444 Q ss_pred ccchhhHHHHHHHHHHHHHHHHHHhCCChHHhcccccccccccCHHHHHHHHHHHH---------------HHHHHHHHH Q lcl|Aclame:pro 270 VSEVAAKDEFWNIKNVTRDDQLAAHRVPPQLMGIIPNNTGGFGDVEKAAMVFARNE---------------VKPLQDRLL 334 (368) Q Consensus 270 l~~~~~d~qf~e~~~~~~~~Ia~~fgVPp~~lg~~~~~~~~~sn~e~~~~~f~~~t---------------l~P~~~~ie 334 (368) ++.......+....+...+.|...-++|..-.+...+ |.......+.... |.-.++.+. T Consensus 334 l~~~~~~~~~e~~~~~L~~~I~~~s~~p~~~~~~~~g------n~Sg~Al~~~~~~l~~ka~~k~~~f~~~l~~~~~li~ 407 (512) T protein:vir:97 334 IYKQYDVQGTEAYKDRLNSDIHMFTNTPNMKDDNFSG------TQSGEAMKYKLFGLEQRTKTKEGLFTKGLRRRAKLLE 407 (512) T ss_pred EeecCCHHHHHHHHHHHHHHHHHHhCCcccCcccccc------cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Confidence 4444445556677788889999999999866543222 1112222222111 111111111 Q ss_pred HHHhhcCc-----c----eEeechhhhhcCChhhhhhhhhhcC Q lcl|Aclame:pro 335 AINDWIGD-----E----VVRFAPYALGGHDQPAAAPGGQRSA 368 (368) Q Consensus 335 ~l~~~l~~-----~----~~~F~~~~Llr~D~~~ra~~~~~~~ 368 (368) ++-...+. . -+.|+ .-+--|....++...+.+ T Consensus 408 ~~~~~~~~~~~~~d~~~i~~~f~--~~~p~~~~e~~~~~~kl~ 448 (512) T protein:vir:97 408 TILKNTRSIDANKDFNTVRYVYN--RNLPKSLIEELKAYIDSG 448 (512) T ss_pred HHHHhcCCcccccccccceEEeC--CCCCcCHHHHHHHHHHHh Confidence 11000110 1 13343 222234555555555555 No 191 >protein:vir:78537 Length: 480 # NCBI annotation: gp11 # Family: family:all:524 # MgeID: mge:1853 # MgeName: U2 # Cross-refs: genbank:acc:YP_001491582;genbank:gi:157786405;genbank:GeneID:5625689 Probab=79.20 E-value=0.11 Score=25.91 Aligned_cols=294 Identities=11% Similarity=0.062 Sum_probs=104.6 Q ss_pred ccChHHHHHHH-HHHhccchhcccccHHHHHHHHHhccc---ccch-------hhhccchH--H-----hhccCCCC--- Q lcl|Aclame:pro 47 VLDRRELLDYV-ECMRMGQWYEPPMPWDGLARSFRAAAH---HSSA-------VYVKRNIL--V-----STFIPHPL--- 105 (368) Q Consensus 47 ~~~~~~~~~~~-~~~~~~~~~~~p~~~~~l~~~~r~~~~---~~~~-------~~~~~~~~--l-----~~~~~n~~--- 105 (368) ..|..+++..+ .-+. ...| .+..+..+++.... .+.. ....+++. + ....++++ T Consensus 1 ~~t~~d~i~~L~~~~~----~~~~-r~~~~~~Yy~G~~~i~~~~~~~~~~~~~~~~~~n~~~~ivd~~~~~l~~~g~~~~ 75 (480) T protein:vir:78 1 MTTYHEHVERLQGLLA----RDLP-NLLEAEAYRNGTRRLKTIGIGAPPELAYLDVQPGWVATYLRTLSDRLDIEGFRIS 75 (480) T ss_pred CCCHHHHHHHHHHHHH----HHHH-HHHHHHHHHhccccchhcccccchhhhhhhhhcchHHHHHHHHHhhhccCceecC Confidence 11112211111 0000 0000 00011111111000 0000 00001110 0 00011111 Q ss_pred ----------------cCHHHHHHHHHhHhhhCCeeEEEEec------CCcceEEEEEecccccccccCCC------e-- Q lcl|Aclame:pro 106 ----------------LSRATFERLVLDWQVFGNAYLERREN------VLGGTIRLDTPLAKYVRRGLDLN------T-- 155 (368) Q Consensus 106 ----------------~~~~~~~~~~~~~ll~Gnay~~i~r~------~~G~~~~L~~l~p~~v~~~~~~~------~-- 155 (368) .-......+..+.+.+|.||..+.++ .+|.+ .+..++|..+.+..+.. . T Consensus 76 ~d~~~~~~l~~i~~~N~~~~~~~~~~~~a~~~G~ay~~v~~~~~~~~d~~~~~-~i~~~~p~~~~~i~D~~~~~~~~~~i 154 (480) T protein:vir:78 76 EDSEGLEELWNWWQANDLDEESVLGHDDSLTFGRAYITVSHPDVESGDPAGIP-LIRVESPLYMYAELDPRNTRRVTRAV 154 (480) T ss_pred CCchhHHHHHHHHHhcCHHHHHHHHHHHHhhcCceEEEeecCccccCCCCCee-EEEEEcccceEEEEcCCCccceEEEE Confidence 01122334567888999999998763 34443 57777777776544321 0 Q ss_pred -eEEEeCC-ce---EEEEcCc-----------------------------cEEEecCCCCcCCccccchhh----HHHHH Q lcl|Aclame:pro 156 -YFFVQNW-QQ---PYTFAAG-----------------------------SVFHLQEPDINQEVYGLPEYL----SALNA 197 (368) Q Consensus 156 -~~~~~~~-~~---~~~~~~~-----------------------------dviH~r~~~~~~~~~G~spi~----~a~~~ 197 (368) ||....+ +. ...+.++ .|+||.+..-.++.+|.|-+. .+..+ T Consensus 155 ~~~~~~d~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~vPvv~f~n~~~~~~~~G~sdi~~~i~~l~Da 234 (480) T protein:vir:78 155 RLYTTRDDVAVPDRATLYLPDETVPLRRNGGLNDQWVVDGDVIKHGLGVVPVVPLTNDPRLGNRYGRSEISPELRKVTDA 234 (480) T ss_pred EEEEeecCCcceEEEEEEeCCeEEEEEecCCCcccccccccccccCCCCcceEEeecccccCCccCccchhHHHHHHHHH Confidence 1111111 10 1111122 245665433234567777553 23333 Q ss_pred HHHHHHHHHHHHHHHhccCCCceeEEeCCCCccHHHHHHHHHHHHHhccccccccccccccCccccccccccccchhhHH Q lcl|Aclame:pro 198 TWLNESATLFRRRYYKNGSHAGFILYMTDAAQKQEDVDTLREAMKSAKGPGNFRNLFMYAPNGKKDGIQLLPVSEVAAKD 277 (368) Q Consensus 198 i~~~~~a~~~~~~~f~ng~~p~gil~~~~~~l~~e~~~~~k~~~~~~~g~~n~~~~~~l~~~g~~~g~~~~pl~~~~~d~ 277 (368) +.....-..-...+| +.|--+|. +..+++...+.-...|.... ++.+.+. + .+.++..+....- . T Consensus 235 ~~~~~s~~~~~~~~~---a~p~~~i~--G~~~~~~~~~~~~~~~~~~~-----~~~~~~~--~--~~~~~~~~~~~~~-~ 299 (480) T protein:vir:78 235 ASRTLMNLQSASQIL---GTPLRVIS--GVTTDELTNDGENTTLDIYY-----GRILTLA--S--EAAKISEFKAAEL-R 299 (480) T ss_pred HHHHHHHHHHHHHhh---cchhhhhh--CCCccccccccccchhhhhh-----hhhccCC--C--CCceEEecCccCH-H Confidence 333332222223333 34444442 32222211111111122211 2222222 1 2345554443322 2 Q ss_pred HHHHHHHHHHHHHHHHhCCChHHhcccccccccccCHHHHHHHHHHHHHHHHHHHHHH-----HH-------hhcCc--- Q lcl|Aclame:pro 278 EFWNIKNVTRDDQLAAHRVPPQLMGIIPNNTGGFGDVEKAAMVFARNEVKPLQDRLLA-----IN-------DWIGD--- 342 (368) Q Consensus 278 qf~e~~~~~~~~Ia~~fgVPp~~lg~~~~~~~~~sn~e~~~~~f~~~tl~P~~~~ie~-----l~-------~~l~~--- 342 (368) .|++..+..+.+|+..=++|++.+|....+ +.......+....|.-.+.+.+. |. ..++. T Consensus 300 ~~~~~l~~~i~~~~~~~~~p~~~fg~~~~n-----~~Sg~Al~~~~~~l~~k~~~~~~~f~~~l~~~~rl~~~~~~~~~~ 374 (480) T protein:vir:78 300 NFAEEMEVFRKEAASITGLPPQYLSSSSEN-----PASAEAIIATDSRIVKMAERKGRIFGGAWERAMRIAMQIMGREVT 374 (480) T ss_pred HHHHHHHHHHHHHhcccCCCHHHhccccCc-----hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcc Confidence 388888899999999999999999853221 11122222222222222222111 11 11121 Q ss_pred -ce----EeechhhhhcCChhhhhhhhhhcC Q lcl|Aclame:pro 343 -EV----VRFAPYALGGHDQPAAAPGGQRSA 368 (368) Q Consensus 343 -~~----~~F~~~~Llr~D~~~ra~~~~~~~ 368 (368) ++ +.|... +. -+.+..|+...+-+ T Consensus 375 ~~~~~i~v~w~~~-~~-~s~~~~ad~~~kl~ 403 (480) T protein:vir:78 375 EEYTRLETVWRDP-ST-PTVAAKADAVSKLY 403 (480) T ss_pred ccceeeeEEecCC-CC-CCHHHHHHHHHHHH Confidence 11 233211 11 11222233222111 No 192 >protein:vir:106639 Length: 481 # NCBI annotation: ORF003 # Family: family:all:125 # MgeID: mge:1557 # MgeName: 187 # Cross-refs: genbank:acc:YP_239490;genbank:gi:66395218;genbank:GeneID:4555793 Probab=78.64 E-value=0.11 Score=25.79 Aligned_cols=327 Identities=10% Similarity=0.060 Sum_probs=113.6 Q ss_pred CCcCCCCccccccccccccccCCCcchhhccccCceEEEECCCc-eec-cCh-HHHHHHHHHHhccchhcccccHHHHHH Q lcl|Aclame:pro 1 MSRNKTRRAARAASAHVRTANTDAPTEHHTDRAAQAEVFSFGDP-VEV-LDR-RELLDYVECMRMGQWYEPPMPWDGLAR 77 (368) Q Consensus 1 m~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~p-~~~-~~~-~~~~~~~~~~~~~~~~~~p~~~~~l~~ 77 (368) +++.+..+..+.... .+--.+. ..+.........-.. +.+ ..+ +.. ..+.+.. .+-....|+.+.+ T Consensus 39 i~~~~~~~~~~~~~~-~~yY~g~--~~~i~~~~~~~~~~~-~~~~~ki~~n~~~~ivd~~----~~~l~g~~~~~~~--- 107 (481) T protein:vir:10 39 ISRHQTEQVPRLEML-ESYYLNR--NTDILAGERRLQKYG-DKADHRAVHNYAKYVSRFI----VGYLTGNPITITH--- 107 (481) T ss_pred HHHHHHHHHHHHHHH-HHHhcCC--CcccccCcccccccc-ccccceeecchHHHHHHHH----HhhhccCCceEec--- Confidence 221111100000000 0000000 000000000000000 000 000 010 0010100 0111112221110 Q ss_pred HHHhcccccchhhhccchHHhh-ccCCCCcCHHHHHHHHHhHhhhCCeeEEEEecCCcceEEEEEecccccccccCCC-- Q lcl|Aclame:pro 78 SFRAAAHHSSAVYVKRNILVST-FIPHPLLSRATFERLVLDWQVFGNAYLERRENVLGGTIRLDTPLAKYVRRGLDLN-- 154 (368) Q Consensus 78 ~~r~~~~~~~~~~~~~~~~l~~-~~~n~~~~~~~~~~~~~~~ll~Gnay~~i~r~~~G~~~~L~~l~p~~v~~~~~~~-- 154 (368) . ..+....+.. +..| .-..+...+..+.+.+|.+|..+..+.+|++ .+..++|..+.+..+.. T Consensus 108 ------~-----d~~~~~~l~~~~~~n--~~~~~~~~~~~~~~~~G~~~~~~~~d~dg~~-~i~~~~p~~~~~v~d~~~~ 173 (481) T protein:vir:10 108 ------Q-----DNQTNDKIIELNDLN--DADEVNSDLALNLSIYGRAYEIVYRDFEDRD-TFKVLDPKSTFVVYDQTLD 173 (481) T ss_pred ------C-----ChhHHHHHHHHHHhc--ChhHHHHHHHHHHHhcCeEEEEEEeCCCCeE-EEEEEcccceEEEEcCCCC Confidence 0 0000111111 1111 1224666788899999999999999888875 56677777765443321 Q ss_pred --e-----eEEEeC-Cce----EEEEcCccEEEecCCC-----------C---------cCCccccchhhHHHHHHHHHH Q lcl|Aclame:pro 155 --T-----YFFVQN-WQQ----PYTFAAGSVFHLQEPD-----------I---------NQEVYGLPEYLSALNATWLNE 202 (368) Q Consensus 155 --~-----~~~~~~-~~~----~~~~~~~dviH~r~~~-----------~---------~~~~~G~spi~~a~~~i~~~~ 202 (368) . +|.... ++. ...+.++.|.|+..-+ + .+...|.|.+......+.... T Consensus 174 ~~~~~~i~~~~~~~~~~~~~~~~~~y~~~~i~~~~~~~~~~~~~~~~~~~~g~vPvv~~~n~~~g~~~~~~v~~lida~~ 253 (481) T protein:vir:10 174 KKVVAGVRYFEKQDKDKVPVQHVEVYTTDKIYYIEIKGGTYHRVEEVEHYYNDVPIIEYLNDQFKQGDFENVIALIDLYD 253 (481) T ss_pred CceEEEEEEEEEeeCCCceEEEEEEEecCeEEEEEecCCceeecccccccCCceeEEEeecCCCCCCchhhHHHHHHHHH Confidence 0 111111 111 1122333333321100 0 012246665554444443322 Q ss_pred HHHHHHHHHHhccCCCceeEEeCCCCccHHHHHHHHHHHHHhccccccccccccccCccccccccccccchhhHHHHHHH Q lcl|Aclame:pro 203 SATLFRRRYYKNGSHAGFILYMTDAAQKQEDVDTLREAMKSAKGPGNFRNLFMYAPNGKKDGIQLLPVSEVAAKDEFWNI 282 (368) Q Consensus 203 ~a~~~~~~~f~ng~~p~gil~~~~~~l~~e~~~~~k~~~~~~~g~~n~~~~~~l~~~g~~~g~~~~pl~~~~~d~qf~e~ 282 (368) ....-...-+.-.+.|-.++.- ....+++..+.++..-. ... ..+..... . +.+.+++-++.......+.+. T Consensus 254 ~~~s~~~~~~~~~~~~~~~~~g-~~~~~~~~~~~~~~~~~-~~~---~~~~~~~~-~--~~~~~~~~l~~~~~~~~~~~~ 325 (481) T protein:vir:10 254 SAQSDTANYMTDLNDAMLAIIG-NVDLDSEDAKAFRDANM-IHL---EPGTNANG-S--EGKAEVKYVYKQYDVAGVEAY 325 (481) T ss_pred HHHHHHHHHHHHhcCceeEeec-CcCCCccchhhhhhccc-eec---cccccccC-C--CCCcceeEEeecCCHHHHHHH Confidence 2222222223333456555541 11233333333322100 000 00111111 1 122233333333345667777 Q ss_pred HHHHHHHHHHHhCCChHHhcccccccccccCHHHHHHHHHHHHHHHHHHH----H----HHH----Hhhc---C-cc--- Q lcl|Aclame:pro 283 KNVTRDDQLAAHRVPPQLMGIIPNNTGGFGDVEKAAMVFARNEVKPLQDR----L----LAI----NDWI---G-DE--- 343 (368) Q Consensus 283 ~~~~~~~Ia~~fgVPp~~lg~~~~~~~~~sn~e~~~~~f~~~tl~P~~~~----i----e~l----~~~l---~-~~--- 343 (368) .+...+.|...-++|....+...++ .......+....|.-.+.. + +++ .+.+ + .. T Consensus 326 ~~~l~~~i~~~s~~p~~~~~~~~~n------~Sg~Al~~~~~~l~~k~~~~~~~~~~~l~~~~~li~~~~~~~~~~~~~~ 399 (481) T protein:vir:10 326 KKRLQNDIHKYTNTPDLNDEQFSGV------QSGESMKYKLFGLEQVRAIKERLFKKGLMKRYKLLLNNVNLTGLKQHNY 399 (481) T ss_pred HHHHHHHHHHHhCCccccccccccc------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCcccc Confidence 8888999999999998766543221 1111122211111111111 1 111 1111 1 11 Q ss_pred ---eEeechhhhhcCChhhhhhhhhhcC Q lcl|Aclame:pro 344 ---VVRFAPYALGGHDQPAAAPGGQRSA 368 (368) Q Consensus 344 ---~~~F~~~~Llr~D~~~ra~~~~~~~ 368 (368) -+.|+. -+--|.+..|+...+++ T Consensus 400 ~~i~v~f~~--~~~~~~~~~a~~~~kl~ 425 (481) T protein:vir:10 400 AELTITFTP--NLPKSMMESINAFNALS 425 (481) T ss_pred ceeeEEeCC--CCCcCHHHHHHHHHHHh Confidence 134542 23345555566555555 No 193 >protein:vir:103951 Length: 511 # NCBI annotation: phage portal protein # Family: family:all:125 # MgeID: mge:1662 # MgeName: phiNM # Cross-refs: genbank:acc:YP_873988;genbank:gi:118430763;genbank:GeneID:4525445 Probab=78.52 E-value=0.11 Score=25.76 Aligned_cols=326 Identities=12% Similarity=0.019 Sum_probs=122.4 Q ss_pred CCcCCCC-ccc------cccccccccccC-CCcchhhccccCceEEEECCCceeccChHHHHHHHHHHhccchhcccccH Q lcl|Aclame:pro 1 MSRNKTR-RAA------RAASAHVRTANT-DAPTEHHTDRAAQAEVFSFGDPVEVLDRRELLDYVECMRMGQWYEPPMPW 72 (368) Q Consensus 1 m~~~k~~-~~~------~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 72 (368) +++-+.+ +++ +-...|.-.... ....... +... +..+-+.. +.+. ..+-....|+.+ T Consensus 49 i~~~~~~~~~r~~~l~~Yy~g~~~i~~~~~~~~~~~~----~~~k-i~~n~~k~------Iv~~----~~~yl~g~p~~~ 113 (511) T protein:vir:10 49 IEHHMDYQRPRLKVLSDYYEGKTKNLVELTRRKEEYM----ADNR-VAHDYASY------ISDF----INGYFLGNPIQY 113 (511) T ss_pred HHHHHHhhHHHHHHHHHHhcccCccccccCccccccc----Ccce-eecchHHH------HHHH----HhhhhcccCcee Confidence 1111100 000 000001000000 0000000 0000 00110110 1110 011112233322 Q ss_pred HHHHHHHHhcccccchhhhccchHHhh-ccCCCCcCHHHHHHHHHhHhhhCCeeEEEEecCCcceEEEEEeccccccccc Q lcl|Aclame:pro 73 DGLARSFRAAAHHSSAVYVKRNILVST-FIPHPLLSRATFERLVLDWQVFGNAYLERRENVLGGTIRLDTPLAKYVRRGL 151 (368) Q Consensus 73 ~~l~~~~r~~~~~~~~~~~~~~~~l~~-~~~n~~~~~~~~~~~~~~~ll~Gnay~~i~r~~~G~~~~L~~l~p~~v~~~~ 151 (368) .. .. .+....+.. +.-| .-......+..+++.+|.||.++.++.+|++ .+..++|..+.+.. T Consensus 114 ~~---------~d-----~~~~~~l~~~~~~n--~~~~~~~~~~~~~~i~G~ay~~vy~dedg~~-~i~~~~p~~~~~vy 176 (511) T protein:vir:10 114 QD---------DD-----KDVLEAIEAFNDLN--DVESHNRSLGLDLSIYGKAYEIMIRNQDDET-RLYKSDAMSTFVIY 176 (511) T ss_pred ec---------Cc-----hHHHHHHHHHHhhc--CHHHHHHHHHHHHHhcCeeEEEEEeCCCCce-EEEEEccceeEEEE Confidence 10 00 000111111 1111 1123455677889999999999999888864 56667777665543 Q ss_pred CCC---------eeEEEe--CC---ce---EEEEcCccEEEecCCCC-------------------------cCCccccc Q lcl|Aclame:pro 152 DLN---------TYFFVQ--NW---QQ---PYTFAAGSVFHLQEPDI-------------------------NQEVYGLP 189 (368) Q Consensus 152 ~~~---------~~~~~~--~~---~~---~~~~~~~dviH~r~~~~-------------------------~~~~~G~s 189 (368) +.. .||.+. .+ +. ...+.++.|.++..... .+.-.|.| T Consensus 177 dd~~~~~~~~~vr~~~~~~~d~~~~~~~~~~~iyt~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~vPvv~f~nn~~g~g 256 (511) T protein:vir:10 177 DNTIERNSIAGVRYLRTKPIDKTDEDEVFTVDLFTSHGVYRYLTSRTNGLKLTPRENGFESHSFERMPITEFSNNERRKG 256 (511) T ss_pred cCCCCCceEEEEEEEEeeecccCccceEEEEEEEeCCcEEEEEecCCCcccccccccccccccCcceeEEEecCCCCCCC Confidence 321 012111 00 00 11233333433321000 00124777 Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHhccCCCceeEEeCCCCccHHHHHHHHHHHHHhccccccccccccccCcccccccccc Q lcl|Aclame:pro 190 EYLSALNATWLNESATLFRRRYYKNGSHAGFILYMTDAAQKQEDVDTLREAMKSAKGPGNFRNLFMYAPNGKKDGIQLLP 269 (368) Q Consensus 190 pi~~a~~~i~~~~~a~~~~~~~f~ng~~p~gil~~~~~~l~~e~~~~~k~~~~~~~g~~n~~~~~~l~~~g~~~g~~~~p 269 (368) .+.-....|.....+..-..+.+...+.|-.+++- ....++++....++.---.. ..+ ........+.+.+.+++. T Consensus 257 d~e~v~~liDa~d~~~S~~~~~~~~~~~~~lv~~g-~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~~~~d~~~ 332 (511) T protein:vir:10 257 DYEKVITLIDLYDNAESDTANYMSDLNDAMLLIKG-NLNLDPVEVRKQKEANVLFL-EPT--VYADSEGRETEGSVDGGY 332 (511) T ss_pred chhhhHHHHHHHHHHHHHHHHHHHHhhCceeeeec-cccCCchhhccchhccceec-ccc--cccccccccCCCCcceeE Confidence 77766666665554444445555555666666542 12233333322221100000 000 000000001123444555 Q ss_pred ccchhhHHHHHHHHHHHHHHHHHHhCCChHHhcccccccccccCHHHHHHHH---------------HHHHHHHHHHHHH Q lcl|Aclame:pro 270 VSEVAAKDEFWNIKNVTRDDQLAAHRVPPQLMGIIPNNTGGFGDVEKAAMVF---------------ARNEVKPLQDRLL 334 (368) Q Consensus 270 l~~~~~d~qf~e~~~~~~~~Ia~~fgVPp~~lg~~~~~~~~~sn~e~~~~~f---------------~~~tl~P~~~~ie 334 (368) ++....+..+....+...+.|+..-++|....+...+ |.......+ +...|.-.++.+. T Consensus 333 l~~~~~~~~~e~~~~~L~~~I~~~s~~P~~~~~~~~~------n~Sg~Al~~~~~~l~~k~~~k~~~f~~~l~~~~~li~ 406 (511) T protein:vir:10 333 IYKQYDVQGTEAYKDRLNSDIHMFTNTPNMKDDNFSG------TQSGEAMKYKLFGLEQRTKTKEGLFTKGLRRRAKLLE 406 (511) T ss_pred EeecCCHHHHHHHHHHHHHHHHHHhCCcccccccccc------cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Confidence 5544455667777888889999999999765432221 111111212 1222222222222 Q ss_pred HHHhhcCc-----c--eEeechhhhhcCChhhhhhhhhhcC Q lcl|Aclame:pro 335 AINDWIGD-----E--VVRFAPYALGGHDQPAAAPGGQRSA 368 (368) Q Consensus 335 ~l~~~l~~-----~--~~~F~~~~Llr~D~~~ra~~~~~~~ 368 (368) ++-...+. + -+++.+..-+--|.+..++...+++ T Consensus 407 ~~~~~~~~~~~~~d~~~i~i~f~~~~p~d~~~~~~~~~kl~ 447 (511) T protein:vir:10 407 TILKNTRSIDANKDFNTVRYVYNRNLPKSLIEELKAYIDSG 447 (511) T ss_pred HHHHhhCCcccccccceeeEEeCCCCCcCHHHHHHHHHHHh Confidence 21111110 1 1343333333445555566555555 No 194 >protein:vir:4073 Length: 279 # NCBI annotation: minor structural protein # Family: family:all:11744 # MgeID: mge:85 # MgeName: c2 # Cross-refs: genbank:acc:NP_043552;genbank:gi:9628686;genbank:GeneID:1261159 Probab=78.29 E-value=0.12 Score=25.71 Aligned_cols=267 Identities=17% Similarity=0.154 Sum_probs=115.4 Q ss_pred CCcCCC-CccccccccccccccCCCcchhhccccCceEEEECCCceeccChHHHHHHHHHHhccchhcccccHHHHHHHH Q lcl|Aclame:pro 1 MSRNKT-RRAARAASAHVRTANTDAPTEHHTDRAAQAEVFSFGDPVEVLDRRELLDYVECMRMGQWYEPPMPWDGLARSF 79 (368) Q Consensus 1 m~~~k~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~ 79 (368) ||--.- ++. ..-+.+.|+.-+|.+-+-...++..+.+..+-++.... T Consensus 1 ~~~~~~~~~~----------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------- 48 (279) T protein:vir:40 1 MSLFNLSRRA----------------------EDVSFSTFTVQDPTTDLLLGKLLGLVSYFDNVDYSEAS---------- 48 (279) T ss_pred Ccccccchhh----------------------cccceeeeeecCcchhHHHHHHHHHHHHhhcccchhhh---------- Confidence 543211 000 01235667766665544333344444333222111100 Q ss_pred HhcccccchhhhccchHHhhccCCCCcCHHHHHHHHHhHhhhCCeeEEEEecCCcceEEEEEecccccccccCCCee--E Q lcl|Aclame:pro 80 RAAAHHSSAVYVKRNILVSTFIPHPLLSRATFERLVLDWQVFGNAYLERRENVLGGTIRLDTPLAKYVRRGLDLNTY--F 157 (368) Q Consensus 80 r~~~~~~~~~~~~~~~~l~~~~~n~~~~~~~~~~~~~~~ll~Gnay~~i~r~~~G~~~~L~~l~p~~v~~~~~~~~~--~ 157 (368) +- +. +.-|.+.|.-...+...+..-- ..+ .+.+.| . T Consensus 49 ------------~~------------------~~-~~~~~~~~~~~~~~~~~~~~~~-------~~~----~~~d~fn~~ 86 (279) T protein:vir:40 49 ------------KL------------------ED-LFYWALQGKEVYRVWYGGFKYY-------AQR----VNADQFNIV 86 (279) T ss_pred ------------hh------------------hh-hhhhhhccceeehhhhhhHHHH-------Hhh----cCcchhhhh Confidence 00 00 0111222322222211111000 000 011111 1 Q ss_pred EEeCCceEEEEcCccEEEecCCCCcCCccccchhhHHHHHHHHHHHHHHHHHHHHhccCCCceeEEeCCCCccHHHHHHH Q lcl|Aclame:pro 158 FVQNWQQPYTFAAGSVFHLQEPDINQEVYGLPEYLSALNATWLNESATLFRRRYYKNGSHAGFILYMTDAAQKQEDVDTL 237 (368) Q Consensus 158 ~~~~~~~~~~~~~~dviH~r~~~~~~~~~G~spi~~a~~~i~~~~~a~~~~~~~f~ng~~p~gil~~~~~~l~~e~~~~~ 237 (368) ........++++-.||.-|-+ +.||.-+= ..-.-++++ .+.-..++ .+-+...++++++-..-.++.+++. T Consensus 87 vr~~~~~~vtVP~~Dv~IieN-----Plv~v~~e-e~~kM~~la--~nai~~KL-D~~~qIk~fIKTd~d~glee~keka 157 (279) T protein:vir:40 87 VREPNRREVTIRTNDYEMLLN-----PFYGANPQ-RFGVMFGMA--SNGIGRRL-DSQAQIKIYWKTKVSSGLKEVWDRI 157 (279) T ss_pred eecCCcceeEeecchhhhhhc-----chheeccc-hhhHHHHHH--Hhhhhhhh-cccceeeeEEecCcchhHHHHHHHH Confidence 111233345555556655542 34665543 222222222 23333444 6667778888876433457778888 Q ss_pred HHHHHHhc-cccccccccccccCccccccccccccchhhHHHHHHHHHHHHHHHHHHhCCChHHhcccccccccccCHHH Q lcl|Aclame:pro 238 REAMKSAK-GPGNFRNLFMYAPNGKKDGIQLLPVSEVAAKDEFWNIKNVTRDDQLAAHRVPPQLMGIIPNNTGGFGDVEK 316 (368) Q Consensus 238 k~~~~~~~-g~~n~~~~~~l~~~g~~~g~~~~pl~~~~~d~qf~e~~~~~~~~Ia~~fgVPp~~lg~~~~~~~~~sn~e~ 316 (368) +..+++.. +..+.+....+ +.|-+++.|.-+-.-. ..+--++-++..+..||||..++- ++..|. T Consensus 158 R~rIk~mlalAk~~nGityi-----d~~ddItQL~kDYSts-lk~die~lkS~l~Sq~GinekIL~--------GsAtE~ 223 (279) T protein:vir:40 158 RERLTQQQQLAREFNGVSVI-----GSDDDIKQIQPDYSGS-LQNDANLAIEIALSEYGMPRELLY--------GQSNEV 223 (279) T ss_pred HHHHHHHHHHHHhcCCeeee-----cCCceeEeeccccccc-cHHHHHHHHHHHHhhcCCchhhcc--------ccCchh Confidence 88886653 44444444444 3344566665332111 122234556789999999998872 223378 Q ss_pred HHHHHHHHHHHHHHHHHHH-HHhhcCcc-eEeechhhhhcCChhhhhhhhhhcC Q lcl|Aclame:pro 317 AAMVFARNEVKPLQDRLLA-INDWIGDE-VVRFAPYALGGHDQPAAAPGGQRSA 368 (368) Q Consensus 317 ~~~~f~~~tl~P~~~~ie~-l~~~l~~~-~~~F~~~~Llr~D~~~ra~~~~~~~ 368 (368) +.+.|+..+|.|+++..|- |.- ..+ ++.|=...--+|-..+. +..|.+ T Consensus 224 q~iAyy~rtVePILkQyek~liY--~~E~fv~y~ttta~gg~~~s~--~~~~~~ 273 (279) T protein:vir:40 224 TIIAFAIQKVLPLLKQHDKNIIF--NQENFVAYISTTAKGGAIESK--SSKRDS 273 (279) T ss_pred hhhhHHHhhHHHHHHHhcccccc--hhhhhhhhheecccCcccccc--cccccC Confidence 8899999999999988762 211 111 12221110001100000 011111 No 195 >protein:vir:105461 Length: 470 # NCBI annotation: putative phage portal protein # Family: family:all:125 # MgeID: mge:1502 # MgeName: KC5a # Cross-refs: genbank:acc:YP_529871;genbank:gi:90592611;genbank:GeneID:3974525 Probab=78.09 E-value=0.12 Score=25.67 Aligned_cols=305 Identities=10% Similarity=0.006 Sum_probs=115.7 Q ss_pred CCcCCCCccccccccccccccCCCcchhhccccCceEEEECCCceeccChHHHHHHHH-HH--hccchhcccccHHHHHH Q lcl|Aclame:pro 1 MSRNKTRRAARAASAHVRTANTDAPTEHHTDRAAQAEVFSFGDPVEVLDRRELLDYVE-CM--RMGQWYEPPMPWDGLAR 77 (368) Q Consensus 1 m~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~-~~--~~~~~~~~p~~~~~l~~ 77 (368) +.+.+.+.+. ......-. .+.| ++.-+..+.. ++ ..+-....|+.+.. T Consensus 38 ~~~~~~~~~~---~~~~~~~~-------------------~~~~----~~ki~~n~~k~Iv~~~~~yl~G~p~~~~~--- 88 (470) T protein:vir:10 38 TTRNNGKAKL---NKEGKKDP-------------------LRSA----DNRIPSNFYQLLVDQEAGYVASVFPDIDV--- 88 (470) T ss_pred hccccchhcc---cccccccc-------------------cccC----CcccccchHHHHHHhhhhheeccceeeec--- Confidence 1111110000 00000000 0000 0000000000 00 00111122322110 Q ss_pred HHHhcccccchhhhccchHHhhccCCCCcCHHHHHHHHHhHhhhCCeeEEEEecCCcceEEEEEecccccccccCCC--- Q lcl|Aclame:pro 78 SFRAAAHHSSAVYVKRNILVSTFIPHPLLSRATFERLVLDWQVFGNAYLERRENVLGGTIRLDTPLAKYVRRGLDLN--- 154 (368) Q Consensus 78 ~~r~~~~~~~~~~~~~~~~l~~~~~n~~~~~~~~~~~~~~~ll~Gnay~~i~r~~~G~~~~L~~l~p~~v~~~~~~~--- 154 (368) .. .+....+..+..+. ....+..+..+++.+|.+|.++..+.+|++ .+..++|..+.+..+.. T Consensus 89 ------~d-----~~~~~~l~~~~~~~--~~~~~~~l~~~~~~~G~a~~~~y~d~~~~~-~~~~~~p~~~~~v~d~~~~~ 154 (470) T protein:vir:10 89 ------GK-----DADNKKIIDVLGDD--RALTLNGLLVDSSNAGRAWLHYWIDEDGNF-RYGIIQPDQITPIYATTLDN 154 (470) T ss_pred ------Cc-----hHHHHHHHHHHhhh--HHHHHHHHHHHHhhcCeeEEEEEecCCCce-EEEEEcccceEEEEcCCCCC Confidence 00 00001111111111 112334566788899999999999888864 56667777766554321 Q ss_pred ------eeEEEe-CCc-e----EEEEcCccEEEecCCCC----------------------------------------c Q lcl|Aclame:pro 155 ------TYFFVQ-NWQ-Q----PYTFAAGSVFHLQEPDI----------------------------------------N 182 (368) Q Consensus 155 ------~~~~~~-~~~-~----~~~~~~~dviH~r~~~~----------------------------------------~ 182 (368) .||... ..+ . ...+.++.+.|++.-.. . T Consensus 155 ~~~a~ir~y~~~~~~~~~~~~~~e~yt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~vPvv~~~ 234 (470) T protein:vir:10 155 KLLGILRSYKQLDPDSGKYFTVHEYWTDKEAQFFRTNATDSTVIEPYNIITSYDLSAGYETGQSNTLKHNFGRVPFIEFS 234 (470) T ss_pred ceEEEEEEEEeeecCCceEEEEEEEEcCCcEEEEEeecCcceeccccccccccccccccccccccccccCCCeeeEEEee Confidence 122211 111 1 11223333333221000 0 Q ss_pred CCccccchhhHHHHHHHHHHHHHHHHHHHHhccCCCceeEEeCCCCccHHHHHHHHHHHHHhccccccccccccccC--c Q lcl|Aclame:pro 183 QEVYGLPEYLSALNATWLNESATLFRRRYYKNGSHAGFILYMTDAAQKQEDVDTLREAMKSAKGPGNFRNLFMYAPN--G 260 (368) Q Consensus 183 ~~~~G~spi~~a~~~i~~~~~a~~~~~~~f~ng~~p~gil~~~~~~l~~e~~~~~k~~~~~~~g~~n~~~~~~l~~~--g 260 (368) +.-.|.|-+......|..-..+..-..+.+..-+.|-.+|+ +..+++ .......++.. +.+.+... + T Consensus 235 nn~~g~sd~e~v~~liDa~d~~~S~~~~~~~~~~~~~lvl~--g~~~~~--~~~~~~~~~~~-------~~i~~~~~~~~ 303 (470) T protein:vir:10 235 KNKYRLPELNKYKGLIDAYDDIYNGFINDLDDVQTVILVLT--NYGGAD--LHQFMNDLRKY-------KSIKINNTGNG 303 (470) T ss_pred cCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHhcCcceeee--cCCccc--cchhhhhhhhc-------CeEeccCCCCC Confidence 01246676766555555554454444555555556666664 322221 11122222221 12222221 2 Q ss_pred cccccccccccchhhHHHHHHHHHHHHHHHHHHhCCChHHhcccccccccccCHHHHHHHHHHHHHHHHHHHHH------ Q lcl|Aclame:pro 261 KKDGIQLLPVSEVAAKDEFWNIKNVTRDDQLAAHRVPPQLMGIIPNNTGGFGDVEKAAMVFARNEVKPLQDRLL------ 334 (368) Q Consensus 261 ~~~g~~~~pl~~~~~d~qf~e~~~~~~~~Ia~~fgVPp~~lg~~~~~~~~~sn~e~~~~~f~~~tl~P~~~~ie------ 334 (368) ...+++|. +.......+....+.....|...-++|..-. .. ++|.......+.-..+.-.+...+ T Consensus 304 ~~~~~~~l--t~~~~~~~~~~~~~~L~~~I~~~s~~p~~~~----~~---~gn~Sg~Alk~~~~~l~~k~~~~~~~~~~~ 374 (470) T protein:vir:10 304 DNSGVDKL--QIDIPVEARDDALKITRKNIFLFGQGIDPAN----FE---SSNASGVAIKMLYSHLELKAAKTQTYFEHA 374 (470) T ss_pred cCceeEEE--eecCChHHHHHHHHHHHHHHHHHhCCCCCCc----cc---cccchHHHHHHHHHHHHHHHHHHHHHHHHH Confidence 22344443 3333344566667778888999888885321 11 123333332222222211111111 Q ss_pred --H----HHhhcCc-----ceEeechhhhhcCChhhhhhhhhhcC Q lcl|Aclame:pro 335 --A----INDWIGD-----EVVRFAPYALGGHDQPAAAPGGQRSA 368 (368) Q Consensus 335 --~----l~~~l~~-----~~~~F~~~~Llr~D~~~ra~~~~~~~ 368 (368) + +...++- ..+++.+..-+--|.+..|+-..+.+ T Consensus 375 l~~~~~~i~~~l~~~~~d~~~i~i~f~~~~p~d~~e~~~~~~~~~ 419 (470) T protein:vir:10 375 INELVRAIMRYLNFSDADKRHISQHWTRTKVEDSLTKAQIVSTVA 419 (470) T ss_pred HHHHHHHHHHHhcccCcccceeeEEeccCCCCCHHHHHHHHHHHh Confidence 1 1122221 12333334444456666666666655 No 196 >protein:vir:96240 Length: 511 # NCBI annotation: ORF006 # Family: family:all:125 # MgeID: mge:1607 # MgeName: 69 # Cross-refs: genbank:acc:YP_239567;genbank:gi:66395299;genbank:GeneID:5132789 Probab=78.04 E-value=0.12 Score=25.66 Aligned_cols=327 Identities=12% Similarity=0.022 Sum_probs=122.5 Q ss_pred CC----cCCCCc---ccccccccccccc-CCCcchhhccccCceEEEECCCceeccChHHHHHHHHHHhccchhcccccH Q lcl|Aclame:pro 1 MS----RNKTRR---AARAASAHVRTAN-TDAPTEHHTDRAAQAEVFSFGDPVEVLDRRELLDYVECMRMGQWYEPPMPW 72 (368) Q Consensus 1 m~----~~k~~~---~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 72 (368) ++ +++.+- .++-...|.-... ...+.... +... +..+-+-. +.+. ..+-+...|+.+ T Consensus 49 i~~~~~~~~~r~~~l~~Yy~g~~~i~~~~~~~~~~~~----~~~k-i~~n~~k~------Iv~~----~~~yl~g~p~~~ 113 (511) T protein:vir:96 49 IEHHMDYQRPRLKVLSDYYEGKTKNLVELTRRKEEYM----ADNR-VAHDYASY------ISDF----INGYFLGNPIQY 113 (511) T ss_pred HHHHHHhhHHHHHHHHHHhcccCccccccCcCccccc----Ccce-eecchHHH------HHHH----HHhhhccCCcee Confidence 11 110000 0000000100000 00000000 0000 00111111 1110 011112223322 Q ss_pred HHHHHHHHhcccccchhhhccchHHhhccCCCCcCHHHHHHHHHhHhhhCCeeEEEEecCCcceEEEEEecccccccccC Q lcl|Aclame:pro 73 DGLARSFRAAAHHSSAVYVKRNILVSTFIPHPLLSRATFERLVLDWQVFGNAYLERRENVLGGTIRLDTPLAKYVRRGLD 152 (368) Q Consensus 73 ~~l~~~~r~~~~~~~~~~~~~~~~l~~~~~n~~~~~~~~~~~~~~~ll~Gnay~~i~r~~~G~~~~L~~l~p~~v~~~~~ 152 (368) .+ .. .+....+..+ .+-+.-......+..+.+.+|.+|.++.++.+|+ +.+..++|..+.+..+ T Consensus 114 ~~---------~~-----~~~~~~l~~~-~~~n~~~~~~~~~~~~~~i~G~a~~~vy~ded~~-~~i~~~~p~~~~~vyd 177 (511) T protein:vir:96 114 QD---------DD-----KDVLEAIEAF-NDLNDVESHNRSLGLDLSIYGKAYELMIRNQDDE-TRLYKSDAMSTFVIYD 177 (511) T ss_pred ec---------Cc-----hHHHHHHHHH-HhhcCHHHHHHHHHHHHHhcCeeEEEEEeCCCCc-eEEEEEccceeEEEEc Confidence 10 00 0001111111 1111122455667788999999999999988876 4577777777765433 Q ss_pred CC---------eeEEEe-CC----ce---EEEEcCccEEEecCCCC-------------------------cCCccccch Q lcl|Aclame:pro 153 LN---------TYFFVQ-NW----QQ---PYTFAAGSVFHLQEPDI-------------------------NQEVYGLPE 190 (368) Q Consensus 153 ~~---------~~~~~~-~~----~~---~~~~~~~dviH~r~~~~-------------------------~~~~~G~sp 190 (368) .. .||... .+ +. ...+.++.|.++..-+. .+.-.|+|- T Consensus 178 d~~~~~~~~~vr~~~~~~~d~~~~~~~~~~~iyt~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~vPvv~~~nn~~g~gd 257 (511) T protein:vir:96 178 NTIERNSIAGVRYLRTKPIDKTDEDEVFTVDLFTSHGVYRYLTSRTNGLKLTPRENGFESHSFERMPITEFSNNERRKGD 257 (511) T ss_pred CCCCCceEEEEEEEEeeeccccccceEEEEEEEeCCcEEEEEecCCCcccccccccccccccCCceeeEEecCCCCCCCc Confidence 21 012111 00 00 11233343333321000 011257777 Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhccCCCceeEEeCCCCccHHHHHHHHHHHHHhccccccccccccccCccccccccccc Q lcl|Aclame:pro 191 YLSALNATWLNESATLFRRRYYKNGSHAGFILYMTDAAQKQEDVDTLREAMKSAKGPGNFRNLFMYAPNGKKDGIQLLPV 270 (368) Q Consensus 191 i~~a~~~i~~~~~a~~~~~~~f~ng~~p~gil~~~~~~l~~e~~~~~k~~~~~~~g~~n~~~~~~l~~~g~~~g~~~~pl 270 (368) +......|.....+..-..+.+...+.|-.+++- ....+.++....++.---.. .. ...........+.+.+++.| T Consensus 258 ~e~v~~liDa~d~~~S~~~~~~~~~~~~~lv~~g-~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~l 333 (511) T protein:vir:96 258 YEKVITLIDLYDNAESDTANYMSDLNDAMLLIKG-NLNLDPVEVRKQKEANVLFL-EP--TVYADSEGRETEGSVDGGYI 333 (511) T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHhhCceeeeec-CccCCchhhcccccccceec-cc--ccccccccccCCCCcceeEE Confidence 7766666665555554445555555666666542 12223333222211100000 00 00000000011233444445 Q ss_pred cchhhHHHHHHHHHHHHHHHHHHhCCChHHhcccccccccccCHHHHHHHHH---------------HHHHHHHHHHHHH Q lcl|Aclame:pro 271 SEVAAKDEFWNIKNVTRDDQLAAHRVPPQLMGIIPNNTGGFGDVEKAAMVFA---------------RNEVKPLQDRLLA 335 (368) Q Consensus 271 ~~~~~d~qf~e~~~~~~~~Ia~~fgVPp~~lg~~~~~~~~~sn~e~~~~~f~---------------~~tl~P~~~~ie~ 335 (368) +.......+.+..+...+.|...-++|....+...+ |.......+. ...|.-.++.|.+ T Consensus 334 ~~~~~~~~~e~~~~~L~~~I~~~s~~p~~~~~~~~~------n~Sg~Al~~~~~~l~~k~~~k~~~~~~~l~~~~~li~~ 407 (511) T protein:vir:96 334 YKQYDVQGTEAYKDRLNSDIHMFTNTPNMKDDNFSG------TQSGEAMKYKLFGLEQRTKTKEGLFTKGLRRRAKLLET 407 (511) T ss_pred eecCCHHHHHHHHHHHHHHHHHHhCCcccccccccc------cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Confidence 444445667778888899999999999865433221 1111122221 1122222222211 Q ss_pred HHhhcCc-----c--eEeechhhhhcCChhhhhhhhhhcC Q lcl|Aclame:pro 336 INDWIGD-----E--VVRFAPYALGGHDQPAAAPGGQRSA 368 (368) Q Consensus 336 l~~~l~~-----~--~~~F~~~~Llr~D~~~ra~~~~~~~ 368 (368) +-...+. + -+++.+..-+--|.+..++...+++ T Consensus 408 ~~~~~~~~~~~~d~~~i~~~f~~~~p~n~~e~~~~~~kl~ 447 (511) T protein:vir:96 408 ILKNTWSIDANKDFNTVRYVYNRNLPKSLIEELKAYIDSG 447 (511) T ss_pred HHHhhcCcccccccccceEEeCCCCCCCHHHHHHHHHHHh Confidence 1111110 1 1233322333345666666666655 No 197 >protein:vir:95806 Length: 440 # NCBI annotation: portal protein # Family: family:all:125 # MgeID: mge:1578 # MgeName: SMP # Cross-refs: genbank:acc:YP_950583;genbank:gi:119953778;genbank:GeneID:5076876 Probab=75.98 E-value=0.14 Score=25.26 Aligned_cols=324 Identities=11% Similarity=0.010 Sum_probs=117.5 Q ss_pred CCcCCCCccc---cccccccc-cccCCCcchhhccccCceEEEECCCceeccChHHHHHHHHHHhccchhcccccHHHHH Q lcl|Aclame:pro 1 MSRNKTRRAA---RAASAHVR-TANTDAPTEHHTDRAAQAEVFSFGDPVEVLDRRELLDYVECMRMGQWYEPPMPWDGLA 76 (368) Q Consensus 1 m~~~k~~~~~---~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~ 76 (368) .++++.+-.+ +-...+.. ..+....... .+ ... +..+-|..+.+. . .+-....|+.+.+ T Consensus 6 ~~~~~~r~~~l~~yy~g~~~~~~~~~~~~~~~---~~-~~k-i~~n~~~~ivd~-----~-----~~~l~g~~~~~~~-- 68 (440) T protein:vir:95 6 LGSQKQRLAILASYAQGDNFSILSGHRRLDDE---KA-DYR-VRHKWGGYISSF-----A-----TGYVIGNPVSIGV-- 68 (440) T ss_pred HHHHHHHHHHHHHHhccCCccccccccccccc---CC-cce-eecchHHHHHHh-----h-----hhheeccCceEee-- Confidence 1111110000 00000000 0000000000 00 000 001111111110 0 0111112222100 Q ss_pred HHHHhcccccchhhhccchHHhh-ccCCCCcCHHHHHHHHHhHhhhCCeeEEEEecCCcceEEEEEecccccccccCCCe Q lcl|Aclame:pro 77 RSFRAAAHHSSAVYVKRNILVST-FIPHPLLSRATFERLVLDWQVFGNAYLERRENVLGGTIRLDTPLAKYVRRGLDLNT 155 (368) Q Consensus 77 ~~~r~~~~~~~~~~~~~~~~l~~-~~~n~~~~~~~~~~~~~~~ll~Gnay~~i~r~~~G~~~~L~~l~p~~v~~~~~~~~ 155 (368) ...+.. +....+.. +..| .-......+..+.+.+|.+|..+..+.+|++ .+..++|..+.+..+... T Consensus 69 ------~~~~~~---~~~~~l~~~~~~n--~~~~~~~~~~~~~~~~G~a~~~~~~d~~~~~-~i~~~~p~~~~~~~d~~~ 136 (440) T protein:vir:95 69 ------MEGGSA---DQLSTIKDIEWQN--DINALNSDLAFDASVYGRAYEYHFRDKDKVD-RVVLISPLEMFVIRDLTV 136 (440) T ss_pred ------CCCccH---HHHHHHHHHHHhc--CHhHHHHHHHHHHhhcCeEEEEEEecCCCce-EEEEEcccceEEEEcCCC Confidence 000000 00000111 1111 1113445677888999999999999888875 466677777665443210 Q ss_pred --------eEEEeCCc-eEEEEcCcc----------------------------EEEecCCCCcCCccccchhhHHHHHH Q lcl|Aclame:pro 156 --------YFFVQNWQ-QPYTFAAGS----------------------------VFHLQEPDINQEVYGLPEYLSALNAT 198 (368) Q Consensus 156 --------~~~~~~~~-~~~~~~~~d----------------------------viH~r~~~~~~~~~G~spi~~a~~~i 198 (368) .|+...+. ....+.++. |+++++ ...|.|-+......+ T Consensus 137 ~~~~~~~i~~~~~~~~~~~~vyt~~~~~~~~~~~~~~~~~~~~~~~~~~~g~vPvv~~~n-----~~~g~sd~e~v~~li 211 (440) T protein:vir:95 137 EQNIIAAVHLPIYADKVNMTVYTKDKVITYKPYSNNSVRLVVDDVKKHSYNDVPVVEWWN-----NRFRMGDYESEISLI 211 (440) T ss_pred CCceEEEEEEEEecCceEEEEEeCCeEEEEEEecCCccceeecceeeccCceeeEEEeeC-----CCCCCCchhhhHHHH Confidence 01111111 111122222 444443 124666666555555 Q ss_pred HHHHHHHHHHHHHHhccCCCceeEEeC--CCCccHHHHHHHHHHHHHhccccccccccccccCccccccccccccchhhH Q lcl|Aclame:pro 199 WLNESATLFRRRYYKNGSHAGFILYMT--DAAQKQEDVDTLREAMKSAKGPGNFRNLFMYAPNGKKDGIQLLPVSEVAAK 276 (368) Q Consensus 199 ~~~~~a~~~~~~~f~ng~~p~gil~~~--~~~l~~e~~~~~k~~~~~~~g~~n~~~~~~l~~~g~~~g~~~~pl~~~~~d 276 (368) .....+..-..+.....+.|-.+++-. ....++++...++..-.-.. .. +. ...+...+.+.+.++..... T Consensus 212 da~~~~~s~~~~~~~~~~~~~~v~~g~~~~~~~~~e~~~~~~~~~~~~~-~~---~~---~~~~~~~~~~~~~lt~~~~~ 284 (440) T protein:vir:95 212 DAYDAGQSDTANYMSDLNDAMLLVKGDLDGIKLSPEDAAKMKDANMLFL-KT---GI---STTGQQTTADASYIYKQYDV 284 (440) T ss_pred HHHHHHHHHHHHHHHHhhcceeeeecccccCCCCccchhhhhhccceec-cc---cc---ccccCCCCcceeEEeecCCH Confidence 444444444444444455666665421 12234555444432211110 00 00 00000122233333333345 Q ss_pred HHHHHHHHHHHHHHHHHhCCChHHhcccccccccccCHHHH----------HHHHHHHHHHHHHHHHHHHHh-hcCcc-- Q lcl|Aclame:pro 277 DEFWNIKNVTRDDQLAAHRVPPQLMGIIPNNTGGFGDVEKA----------AMVFARNEVKPLQDRLLAIND-WIGDE-- 343 (368) Q Consensus 277 ~qf~e~~~~~~~~Ia~~fgVPp~~lg~~~~~~~~~sn~e~~----------~~~f~~~tl~P~~~~ie~l~~-~l~~~-- 343 (368) ..+....+...+.|...-++|..-.+...++. ++--++.. .+.++...|...++.+..+-. .-+.. T Consensus 285 ~~~~~~~~~l~~~i~~~s~~p~~~~~~~~~n~-Sg~Al~~~~~~l~~k~~~k~~~~~~~l~~~~~li~~~~~~~~~~~~~ 363 (440) T protein:vir:95 285 NGTEAYKNRLANDIHRFSRIPNLDDDRFNSTS-SGIALLYKMIGLEQVRKDKETYFTKALRRRYELISNIHKAINGPVIE 363 (440) T ss_pred HHHHHHHHHHHHHHHHHhCCcccccccccccc-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcccc Confidence 55777788889999999999976544322211 11111100 011112222222222221111 01111 Q ss_pred --e--EeechhhhhcCChhhhhhhhhhcC Q lcl|Aclame:pro 344 --V--VRFAPYALGGHDQPAAAPGGQRSA 368 (368) Q Consensus 344 --~--~~F~~~~Llr~D~~~ra~~~~~~~ 368 (368) . +.|. .-+--|.+..|+...+.+ T Consensus 364 ~~~v~i~f~--~~~p~~~~~~ad~~~kl~ 390 (440) T protein:vir:95 364 ANKLTFTFH--PNIPQDVWTEIKAYIEAG 390 (440) T ss_pred cccceEEeC--CCCCCCHHHHHHHHHHHh Confidence 1 3343 223345566666666655 No 198 >protein:vir:106571 Length: 499 # NCBI annotation: putative portal protein # Family: family:all:125 # MgeID: mge:1598 # MgeName: Lj965 # Cross-refs: genbank:acc:NP_958580;genbank:gi:41179240;genbank:GeneID:2717107 Probab=75.79 E-value=0.14 Score=25.22 Aligned_cols=320 Identities=9% Similarity=0.031 Sum_probs=111.5 Q ss_pred CCcCCCCccccccccccccccCCCcchhhcccc-CceEEEECCCceeccChHHHHHHHHHHhccchhcccccHHHHHHHH Q lcl|Aclame:pro 1 MSRNKTRRAARAASAHVRTANTDAPTEHHTDRA-AQAEVFSFGDPVEVLDRRELLDYVECMRMGQWYEPPMPWDGLARSF 79 (368) Q Consensus 1 m~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~ 79 (368) +++.+.+.++.+.-..-=.....+......... ..... ..+-|-. +.+. ..+-....|+.+.. T Consensus 25 i~~~~~~~~~~~~l~~Yy~g~~~i~~~~~~~~~~~~~ki-~~n~~~~------Iv~~----~~~~l~g~p~~~~~----- 88 (499) T protein:vir:10 25 IRELQNRKKRLDKLSDYYNGKQEIEKHEFDNATVEAANV-MVNHAKY------ITDM----NVGFMTGNPVKYVA----- 88 (499) T ss_pred HHHHHHHHHHHHHHHHHhccccchhcCCcCcCCCCccee-ecchHHH------HHHH----HhhhhcccCceeec----- Confidence 111111111110000000000000000000000 00000 0000000 0000 00111122322110 Q ss_pred HhcccccchhhhccchHHhhccCCCCcCHHHHHHHHHhHhhhCCeeEEEEecCCcce----------------EEEEEec Q lcl|Aclame:pro 80 RAAAHHSSAVYVKRNILVSTFIPHPLLSRATFERLVLDWQVFGNAYLERRENVLGGT----------------IRLDTPL 143 (368) Q Consensus 80 r~~~~~~~~~~~~~~~~l~~~~~n~~~~~~~~~~~~~~~ll~Gnay~~i~r~~~G~~----------------~~L~~l~ 143 (368) ... +....+..+ .+.+.-......+..+.+.+|.+|.++..+.+|.+ +.+..++ T Consensus 89 ----~~~-----~~~~~l~~~-~~~n~~~~~~~~~~~~~~~~G~~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~~~~v~ 158 (499) T protein:vir:10 89 ----EKG-----KNIDDILEV-FNQIDIHKHDIELEKDLSVFGYGYELLYLKKTDPISVRDELGNEKLTPNTELKIEVID 158 (499) T ss_pred ----CCh-----hHHHHHHHH-HhhcCHhHHHHHHHHHHHhcCceEEEEEecccccccccccccccccccccceEEEEEc Confidence 000 000011111 11111123456677889999999999988877643 3456666 Q ss_pred ccccccccCCC---------eeEEEeC--Cce----EEEEcCccEEEecCCC----------------C---------cC Q lcl|Aclame:pro 144 AKYVRRGLDLN---------TYFFVQN--WQQ----PYTFAAGSVFHLQEPD----------------I---------NQ 183 (368) Q Consensus 144 p~~v~~~~~~~---------~~~~~~~--~~~----~~~~~~~dviH~r~~~----------------~---------~~ 183 (368) |..+-+..+.. .||.... +++ ...+.++.|.++...+ + .+ T Consensus 159 p~~~~~v~~d~~~~~~~~~i~~~~~~~~~~~~~~~~~~iyt~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~vPvv~~~n 238 (499) T protein:vir:10 159 PRATVVVCDDTVEHDPLFAVFTQEKKDLEGNTNGYSITVYMPQRIVEYRTKTTMEVSANDPIVYDGENLFGAVPIIEFRN 238 (499) T ss_pred ccceEEEecCCCCcceEEEEEEEEEeecCCCceEEEEEEEeCCeEEEEEecCCccccCcceecccccCCCCccceEEecC Confidence 66554333211 0121111 111 1123344444332100 0 00 Q ss_pred CccccchhhHHHHHHHHHHHHHHHHHHHHhccCCCceeEEeCCCCccHHHHHHHHHHHHHhccccccccccccccCcccc Q lcl|Aclame:pro 184 EVYGLPEYLSALNATWLNESATLFRRRYYKNGSHAGFILYMTDAAQKQEDVDTLREAMKSAKGPGNFRNLFMYAPNGKKD 263 (368) Q Consensus 184 ~~~G~spi~~a~~~i~~~~~a~~~~~~~f~ng~~p~gil~~~~~~l~~e~~~~~k~~~~~~~g~~n~~~~~~l~~~g~~~ 263 (368) ...|.|-+.-....+.....+..-..+.+...+.|-.+++ +..+++.. ... ..+. .+....+.. +. T Consensus 239 ~~~~~~d~e~v~~liD~~~~~~S~~~~~~~~~~~~~lv~~--G~~~~~~~-~~~-~~~~-------~~~~~~~~~---~~ 304 (499) T protein:vir:10 239 NEERQGDFEQLISLIDAYNLLQTDRISDKEAFVDALLVTF--GFGLGDDK-DDI-QRLK-------RGAIEAPPR---EE 304 (499) T ss_pred CCCCCCchHhHHHHHHHHHHHHHHHHHHHHHhcCceeeee--cCcccccc-chh-hhhh-------hcceeccCC---CC Confidence 1235565655555555444444444444455556666654 43333221 111 1111 112222211 22 Q ss_pred ccccccccchhhHHHHHHHHHHHHHHHHHHhCCChHHhcccccccccccCHHHHHHHHH---------------HHHHHH Q lcl|Aclame:pro 264 GIQLLPVSEVAAKDEFWNIKNVTRDDQLAAHRVPPQLMGIIPNNTGGFGDVEKAAMVFA---------------RNEVKP 328 (368) Q Consensus 264 g~~~~pl~~~~~d~qf~e~~~~~~~~Ia~~fgVPp~~lg~~~~~~~~~sn~e~~~~~f~---------------~~tl~P 328 (368) +.+++.|+.......+.+..+...+.|...-++|..--+...+ |.....+.+. ...+.- T Consensus 305 ~~d~~~l~~~~~~~~~~~~~~~l~~~I~~~s~~p~~~~~~~~g------n~Sg~Al~~~~~~l~~k~~~k~~~~~~~l~~ 378 (499) T protein:vir:10 305 GADIEWLTKSFDETQVNLLSQSIENDIHKISYVPNMNDEKFMG------NVSGEAMKFKLFGLENLLSIKQRYFFDGLRR 378 (499) T ss_pred CCcceEEeccCCHHHHHHHHHHHHHHHHHHhCcccCCchhhcc------cchHHHHHHHHHHHHHHHHHHHHHHHHHHHH Confidence 3334444443344556666777788888888888532211111 1111122221 112222 Q ss_pred HHHHHHHHHhhcCc--c----eEeechhhhhcCChhhhhhhhhhcC Q lcl|Aclame:pro 329 LQDRLLAINDWIGD--E----VVRFAPYALGGHDQPAAAPGGQRSA 368 (368) Q Consensus 329 ~~~~ie~l~~~l~~--~----~~~F~~~~Llr~D~~~ra~~~~~~~ 368 (368) .++.+..+-..-+. + -+.|+... --|....++...+++ T Consensus 379 ~~~li~~~~~~~~~~~d~~~i~i~f~~~~--p~n~~e~~~~~~kl~ 422 (499) T protein:vir:10 379 RLKLIQTIVNIKGANDDASGCKISLVANI--PSNLSDVVNNVKNAD 422 (499) T ss_pred HHHHHHHHHhccCCccccccceEEeCCCC--CCCHHHHHHHHHHHh Confidence 22222111100011 1 13443222 245566666666655 No 199 >protein:vir:4223 Length: 486 # NCBI annotation: predicted 53.7Kd protein # Family: family:all:524 # MgeID: mge:89 # MgeName: L5 # Cross-refs: genbank:acc:NP_039678;swissprot:sw:q05220;genbank:gi:9625444;uniprot:Q05220;genbank:GeneID:2942930;interpro:IPR010859 Probab=74.97 E-value=0.15 Score=25.07 Aligned_cols=306 Identities=9% Similarity=0.028 Sum_probs=106.9 Q ss_pred ccCceEEEECCCceeccChHHHHH-HHHH-------------Hhccchhcc--cccH-HHHHHHHHhcccccchhhhccc Q lcl|Aclame:pro 32 RAAQAEVFSFGDPVEVLDRRELLD-YVEC-------------MRMGQWYEP--PMPW-DGLARSFRAAAHHSSAVYVKRN 94 (368) Q Consensus 32 ~~~~~~~~~~g~p~~~~~~~~~~~-~~~~-------------~~~~~~~~~--p~~~-~~l~~~~r~~~~~~~~~~~~~~ 94 (368) .+....-. .+++. ...+.. +... ++.|..... +... ..+....-...+...++.. T Consensus 1 ~~~~~~~~--~e~~~---~~~~~~~l~~~~~~~~~r~~~l~~YY~G~~~i~~~~~~~~~~~~~~~~v~n~~~~iVd~--- 72 (486) T protein:vir:42 1 MTAPLPGM--EEIED---PAVVREEMISAFEDASKDLASNTSYYDAERRPEAIGVTVPREMQQLLAHVGYPRLYVDS--- 72 (486) T ss_pred CCCCCCCC--CCccc---HHHHHHHHHHHHHHHHHHHHHHHHHhcccCcchhcccccchhHhhhhhccchHHHHHHH--- Confidence 11111111 11111 011111 1111 111211000 0000 0000000000011110000 Q ss_pred hHHhhccCCCCc-------------------CHHHHHHHHHhHhhhCCeeEEEEecCCcc-------eEEEEEecccccc Q lcl|Aclame:pro 95 ILVSTFIPHPLL-------------------SRATFERLVLDWQVFGNAYLERRENVLGG-------TIRLDTPLAKYVR 148 (368) Q Consensus 95 ~~l~~~~~n~~~-------------------~~~~~~~~~~~~ll~Gnay~~i~r~~~G~-------~~~L~~l~p~~v~ 148 (368) ......++++. -......+..+++.+|.||..+.++..|. ...+.+++|..+. T Consensus 73 -~~~~l~~~g~~~~~~~~~~~~~~~i~~~N~~d~~~~~~~~~a~~~G~ay~~v~~~e~~~~~~~~~~~~~i~~~~p~~~~ 151 (486) T protein:vir:42 73 -VAERQAVEGFRLGDADEADEELWQWWQANNLDIEAPLGYTDAYVHGRSFITISKPDPQLDLGWDQNVPIIRVEPPTRMH 151 (486) T ss_pred -HHhhhcccceecCCCchhHHHHHHHHHhcChhHHHHHHHHHHhhcCceEEEEecCCcccccccCCCeeEEEEecccceE Confidence 00000111111 01222345678889999999998765432 2356677777665 Q ss_pred cccCCCe--------eEEEeCCceE---EEEcCc-------------------------cEEEecCCCCcCCccccchhh Q lcl|Aclame:pro 149 RGLDLNT--------YFFVQNWQQP---YTFAAG-------------------------SVFHLQEPDINQEVYGLPEYL 192 (368) Q Consensus 149 ~~~~~~~--------~~~~~~~~~~---~~~~~~-------------------------dviH~r~~~~~~~~~G~spi~ 192 (368) +..+... +++...++.. ..+.++ .|++|++..-.++.+|.|-|. T Consensus 152 ~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~h~~g~vPvv~~~n~~~~~~~~G~s~i~ 231 (486) T protein:vir:42 152 AEIDPRINRVSKAIRVAYDKEGNEIQAATLYTPMETIGWFRADGEWAEWFNVPHGLGVVPVVPLPNRTRLSDLYGTSEIT 231 (486) T ss_pred EEEeCCCCCeEEEEEEEEecCCCeEEEEEEEcCCcEEEEEecCCcEEeecceecCCCCceEEEeccccccCCCCCcccch Confidence 4443210 1110011110 011111 255565432234567887554 Q ss_pred ----HHHHHHHHHHHHHHHHHHHHhccCCCceeEEeCCCCccHHHHH--HHHHHHHHhccccccccccccccCccccccc Q lcl|Aclame:pro 193 ----SALNATWLNESATLFRRRYYKNGSHAGFILYMTDAAQKQEDVD--TLREAMKSAKGPGNFRNLFMYAPNGKKDGIQ 266 (368) Q Consensus 193 ----~a~~~i~~~~~a~~~~~~~f~ng~~p~gil~~~~~~l~~e~~~--~~k~~~~~~~g~~n~~~~~~l~~~g~~~g~~ 266 (368) .+.+.+.....-..-...+| +.|--+|. +..+.+...+ .-...|+.. .++++++. + .+.+ T Consensus 232 ~~v~~liDa~~~~~s~~~~~~e~~---a~p~~~i~--G~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~-~---~~~~ 297 (486) T protein:vir:42 232 PELRSMTDAAARILMLMQATAELM---GVPQRLIF--GIKPEEIGVDSETGQTLFDAY-----LARILAFE-D---AEGK 297 (486) T ss_pred hhHHHHHHHHHHHHHHHHHHHHhh---cchHHHhh--cCCccccccccccccchhhhh-----hchhcccC-C---CCce Confidence 33344443322222222233 33444442 2111111100 001112221 23333332 1 2345 Q ss_pred cccccchhhHHHHHHHHHHHHHHHHHHhCCChHHhcccccccccccCHHHHHHHHHHHHH---------------HHHHH Q lcl|Aclame:pro 267 LLPVSEVAAKDEFWNIKNVTRDDQLAAHRVPPQLMGIIPNNTGGFGDVEKAAMVFARNEV---------------KPLQD 331 (368) Q Consensus 267 ~~pl~~~~~d~qf~e~~~~~~~~Ia~~fgVPp~~lg~~~~~~~~~sn~e~~~~~f~~~tl---------------~P~~~ 331 (368) +..+..... ..|++..+..+.+++..=++|++.+|....+.++ ...+.+....| .-.++ T Consensus 298 ~~q~~~~~~-e~~~~~l~~~i~~~s~~~~~p~~~fg~~~~n~~S-----g~Al~~~~~~l~~ka~~~~~~f~~~l~~~~~ 371 (486) T protein:vir:42 298 IQQFSAAEL-ANFTNALDQIAKQVAAYTGLPPQYLSTAADNPAS-----AEAIRAAESRLIKKVERKNLMFGGAWEEAMR 371 (486) T ss_pred EEeecccCH-HHHHHHHHHHHHHHhcccCCCHHHhccccCchhH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Confidence 544433221 2388888888999999999999998754322111 11222222222 11111 Q ss_pred HHHHHHhh--cCcc----eEeechhhhhcCChhhhhhhhhhcC Q lcl|Aclame:pro 332 RLLAINDW--IGDE----VVRFAPYALGGHDQPAAAPGGQRSA 368 (368) Q Consensus 332 ~ie~l~~~--l~~~----~~~F~~~~Llr~D~~~ra~~~~~~~ 368 (368) .+..+... ...+ -+.|... +--+.+..|+...+-+ T Consensus 372 l~~~~~~~~~~~~d~~~i~v~w~~~--~~~s~~~~ad~~~kl~ 412 (486) T protein:vir:42 372 IAYRIMKGGDVPPDMLRMETVWRDP--STPTYAAKADAATKLY 412 (486) T ss_pred HHHHHhcCCCccccceeeeEEecCC--CCCCHHHHHHHHHHHH Confidence 11111100 0111 1345322 1223333444443322 No 200 >protein:vir:102602 Length: 456 # NCBI annotation: gp3 # Family: family:all:5096 # MgeID: mge:1661 # MgeName: Llij # Cross-refs: genbank:acc:YP_654999;genbank:gi:109392189;genbank:GeneID:4157224 Probab=72.51 E-value=0.18 Score=24.64 Aligned_cols=300 Identities=12% Similarity=0.018 Sum_probs=104.1 Q ss_pred eeccChHHHHHHH-HH-------------Hhccchh--cccccH-HHHHHHHH-h-cccccchhhhccchHHhhccCCCC Q lcl|Aclame:pro 45 VEVLDRRELLDYV-EC-------------MRMGQWY--EPPMPW-DGLARSFR-A-AAHHSSAVYVKRNILVSTFIPHPL 105 (368) Q Consensus 45 ~~~~~~~~~~~~~-~~-------------~~~~~~~--~~p~~~-~~l~~~~r-~-~~~~~~~~~~~~~~~l~~~~~n~~ 105 (368) .+.++..+.+.++ .. ++.|..- ..|... ..+....+ . ..+...++... ......+|. T Consensus 1 ~~~~t~~~~~~~l~~~~~~~~~r~~~l~~Yy~g~~~i~~~~~~~~~~~~~~~~k~~~n~~~~ivd~~----~~~l~~~~~ 76 (456) T protein:vir:10 1 MTASTPAEWLPVLTKRIDDGMSRVRLLARYSNGDAPLPELTRNTSAAWRSFQREARTNWGLMVRDSV----ADRIIPNGI 76 (456) T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhcCcccChhhhhhhhhhhcchHHHHHHHH----HhhhccCCe Confidence 1112221211111 00 1112110 001000 00000000 0 00000000000 000111211 Q ss_pred c---------------------CHHHHHHHHHhHhhhCCeeEEEEecCCcceEEEEEecccccccccCCCe--------e Q lcl|Aclame:pro 106 L---------------------SRATFERLVLDWQVFGNAYLERRENVLGGTIRLDTPLAKYVRRGLDLNT--------Y 156 (368) Q Consensus 106 ~---------------------~~~~~~~~~~~~ll~Gnay~~i~r~~~G~~~~L~~l~p~~v~~~~~~~~--------~ 156 (368) . -......+..+.+.+|.||..+..+.+|.+ .+..++|..+.+..+... . T Consensus 77 ~~~~~~d~~~~~~~~~i~~~N~~d~~~~~~~~~a~i~G~ay~~v~~d~~g~~-~i~~~~p~~~~~i~d~~~~~~~~~~i~ 155 (456) T protein:vir:10 77 TVGGSADSDLALRARRIWRDNRMDSVCKQWVKYGLDFGESYLTCWRRDDGTA-TITADSPETMVVSVDPLQPWRIRAAMR 155 (456) T ss_pred ecCCCCCcchHHHHHHHHHhcChhhHHHHHHHHHhhcCeeEEEEeeCCCCce-EEEEEccceeEEEEcCCCCcceEEEEE Confidence 1 012223455678889999999999888875 356677776654433210 0 Q ss_pred EEEeCCceE----------------------------EEEcCcc------EEEecCCCC---cCCccccchhhHHHHHHH Q lcl|Aclame:pro 157 FFVQNWQQP----------------------------YTFAAGS------VFHLQEPDI---NQEVYGLPEYLSALNATW 199 (368) Q Consensus 157 ~~~~~~~~~----------------------------~~~~~~d------viH~r~~~~---~~~~~G~spi~~a~~~i~ 199 (368) |+...++.. .....+. .-|.-+..| .....|+|.++.....+. T Consensus 156 ~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pvv~~~N~~g~gd~e~vi~liD 235 (456) T protein:vir:10 156 WWRDLDAESDFAIVWSGDGWQKFARPCFVQSSSRRRLVTRISDSWVPVGDAVVTGSPPPVVVYQNPDGMGEVEPHIDIIN 235 (456) T ss_pred EEEecCCceeEEEEEeccceeEEEEEEEEeecccceeeeecCCceeeccccCCCCCceeEEEecCCCCCchhhhhHHHHH Confidence 111111100 0000000 001000000 011247777766555444 Q ss_pred HHHHHHHHHHHHHhccCCCceeEEeCCC--CccHHHHHHH--HHHHHHhccccccccccccccCccccccccccccchhh Q lcl|Aclame:pro 200 LNESATLFRRRYYKNGSHAGFILYMTDA--AQKQEDVDTL--REAMKSAKGPGNFRNLFMYAPNGKKDGIQLLPVSEVAA 275 (368) Q Consensus 200 ~~~~a~~~~~~~f~ng~~p~gil~~~~~--~l~~e~~~~~--k~~~~~~~g~~n~~~~~~l~~~g~~~g~~~~pl~~~~~ 275 (368) ....+..-.......-+.|--++.-.+. ...++.-..+ ...|+... +..+.+ +.+.++..+....- T Consensus 236 a~~~~~s~~~~~~~~~a~~~~~i~G~~~~~~~~d~~g~~~~~~~~~~~~~-----~~~~~~-----~~~~~~~q~~~~~~ 305 (456) T protein:vir:10 236 RINRAELQLLSTMAIQAFRQRALKSTEHGLPNVDENGNAIDYASIFEAAP-----GALWEL-----PPGVDIWESQANDF 305 (456) T ss_pred HHHHHHHHHHHHHHHhhhHhHhhhccCcccccccccccccchhhhhhhhc-----cccccC-----CCCcceEEecccCh Confidence 4333322222222222233333321100 0011111111 12233221 222222 23445544433221 Q ss_pred HHHHHHHHHHHHHHHHHHhCCChHHhcccccccccccCHHHHHHHHHHHHHHHHHHHHH--------HHHhhc----Cc- Q lcl|Aclame:pro 276 KDEFWNIKNVTRDDQLAAHRVPPQLMGIIPNNTGGFGDVEKAAMVFARNEVKPLQDRLL--------AINDWI----GD- 342 (368) Q Consensus 276 d~qf~e~~~~~~~~Ia~~fgVPp~~lg~~~~~~~~~sn~e~~~~~f~~~tl~P~~~~ie--------~l~~~l----~~- 342 (368) ..|++..+..+.+|++.=++|++.+|.... |.......+....|.-.+...+ ++.+.+ +. T Consensus 306 -~~~~~~l~~~i~~~~~~s~~p~~~~~~~~~------N~Sg~Ai~~~~~~l~~k~~~~~~~f~~~l~~~~rl~~~~~g~~ 378 (456) T protein:vir:10 306 -TPMLSAIKEHIRQLSSATKTPLPMLMPDSA------NQSAEGAHNIEKGFLFKCEDRLSIAKIGLEAILVKALQIEGES 378 (456) T ss_pred -hHHHHHHHHHHHHHHhccCCChHHhccccc------ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC Confidence 238999999999999999999999975322 2222222233222222222221 111110 11 Q ss_pred c----eEeechhhhhcCChhhhhhhhhhcC Q lcl|Aclame:pro 343 E----VVRFAPYALGGHDQPAAAPGGQRSA 368 (368) Q Consensus 343 ~----~~~F~~~~Llr~D~~~ra~~~~~~~ 368 (368) + -+.|... +--+....|+...+.. T Consensus 379 ~~~~~~v~w~~~--~~~~~~~~ada~~kl~ 406 (456) T protein:vir:10 379 VEDTVDVSFESP--DRVTLGEKYSAASLAK 406 (456) T ss_pred cccceeEEecCC--CCcCHHHHHHHHHHHH Confidence 1 1334221 1122333344333321 No 201 >protein:vir:105819 Length: 456 # NCBI annotation: gp3 # Family: family:all:5096 # MgeID: mge:1636 # MgeName: PMC # Cross-refs: genbank:acc:YP_655764;genbank:gi:109522087;genbank:GeneID:4157627 Probab=72.51 E-value=0.18 Score=24.64 Aligned_cols=300 Identities=12% Similarity=0.018 Sum_probs=104.1 Q ss_pred eeccChHHHHHHH-HH-------------Hhccchh--cccccH-HHHHHHHH-h-cccccchhhhccchHHhhccCCCC Q lcl|Aclame:pro 45 VEVLDRRELLDYV-EC-------------MRMGQWY--EPPMPW-DGLARSFR-A-AAHHSSAVYVKRNILVSTFIPHPL 105 (368) Q Consensus 45 ~~~~~~~~~~~~~-~~-------------~~~~~~~--~~p~~~-~~l~~~~r-~-~~~~~~~~~~~~~~~l~~~~~n~~ 105 (368) .+.++..+.+.++ .. ++.|..- ..|... ..+....+ . ..+...++... ......+|. T Consensus 1 ~~~~t~~~~~~~l~~~~~~~~~r~~~l~~Yy~g~~~i~~~~~~~~~~~~~~~~k~~~n~~~~ivd~~----~~~l~~~~~ 76 (456) T protein:vir:10 1 MTASTPAEWLPVLTKRIDDGMSRVRLLARYSNGDAPLPELTRNTSAAWRSFQREARTNWGLMVRDSV----ADRIIPNGI 76 (456) T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhcCcccChhhhhhhhhhhcchHHHHHHHH----HhhhccCCe Confidence 1112221211111 00 1112110 001000 00000000 0 00000000000 000111211 Q ss_pred c---------------------CHHHHHHHHHhHhhhCCeeEEEEecCCcceEEEEEecccccccccCCCe--------e Q lcl|Aclame:pro 106 L---------------------SRATFERLVLDWQVFGNAYLERRENVLGGTIRLDTPLAKYVRRGLDLNT--------Y 156 (368) Q Consensus 106 ~---------------------~~~~~~~~~~~~ll~Gnay~~i~r~~~G~~~~L~~l~p~~v~~~~~~~~--------~ 156 (368) . -......+..+.+.+|.||..+..+.+|.+ .+..++|..+.+..+... . T Consensus 77 ~~~~~~d~~~~~~~~~i~~~N~~d~~~~~~~~~a~i~G~ay~~v~~d~~g~~-~i~~~~p~~~~~i~d~~~~~~~~~~i~ 155 (456) T protein:vir:10 77 TVGGSADSDLALRARRIWRDNRMDSVCKQWVKYGLDFGESYLTCWRRDDGTA-TITADSPETMVVSVDPLQPWRIRAAMR 155 (456) T ss_pred ecCCCCCcchHHHHHHHHHhcChhhHHHHHHHHHhhcCeeEEEEeeCCCCce-EEEEEccceeEEEEcCCCCcceEEEEE Confidence 1 012223455678889999999999888875 356677776654433210 0 Q ss_pred EEEeCCceE----------------------------EEEcCcc------EEEecCCCC---cCCccccchhhHHHHHHH Q lcl|Aclame:pro 157 FFVQNWQQP----------------------------YTFAAGS------VFHLQEPDI---NQEVYGLPEYLSALNATW 199 (368) Q Consensus 157 ~~~~~~~~~----------------------------~~~~~~d------viH~r~~~~---~~~~~G~spi~~a~~~i~ 199 (368) |+...++.. .....+. .-|.-+..| .....|+|.++.....+. T Consensus 156 ~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pvv~~~N~~g~gd~e~vi~liD 235 (456) T protein:vir:10 156 WWRDLDAESDFAIVWSGDGWQKFARPCFVQSSSRRRLVTRISDSWVPVGDAVVTGSPPPVVVYQNPDGMGEVEPHIDIIN 235 (456) T ss_pred EEEecCCceeEEEEEeccceeEEEEEEEEeecccceeeeecCCceeeccccCCCCCceeEEEecCCCCCchhhhhHHHHH Confidence 111111100 0000000 001000000 011247777766555444 Q ss_pred HHHHHHHHHHHHHhccCCCceeEEeCCC--CccHHHHHHH--HHHHHHhccccccccccccccCccccccccccccchhh Q lcl|Aclame:pro 200 LNESATLFRRRYYKNGSHAGFILYMTDA--AQKQEDVDTL--REAMKSAKGPGNFRNLFMYAPNGKKDGIQLLPVSEVAA 275 (368) Q Consensus 200 ~~~~a~~~~~~~f~ng~~p~gil~~~~~--~l~~e~~~~~--k~~~~~~~g~~n~~~~~~l~~~g~~~g~~~~pl~~~~~ 275 (368) ....+..-.......-+.|--++.-.+. ...++.-..+ ...|+... +..+.+ +.+.++..+....- T Consensus 236 a~~~~~s~~~~~~~~~a~~~~~i~G~~~~~~~~d~~g~~~~~~~~~~~~~-----~~~~~~-----~~~~~~~q~~~~~~ 305 (456) T protein:vir:10 236 RINRAELQLLSTMAIQAFRQRALKSTEHGLPNVDENGNAIDYASIFEAAP-----GALWEL-----PPGVDIWESQANDF 305 (456) T ss_pred HHHHHHHHHHHHHHHhhhHhHhhhccCcccccccccccccchhhhhhhhc-----cccccC-----CCCcceEEecccCh Confidence 4333322222222222233333321100 0011111111 12233221 222222 23445544433221 Q ss_pred HHHHHHHHHHHHHHHHHHhCCChHHhcccccccccccCHHHHHHHHHHHHHHHHHHHHH--------HHHhhc----Cc- Q lcl|Aclame:pro 276 KDEFWNIKNVTRDDQLAAHRVPPQLMGIIPNNTGGFGDVEKAAMVFARNEVKPLQDRLL--------AINDWI----GD- 342 (368) Q Consensus 276 d~qf~e~~~~~~~~Ia~~fgVPp~~lg~~~~~~~~~sn~e~~~~~f~~~tl~P~~~~ie--------~l~~~l----~~- 342 (368) ..|++..+..+.+|++.=++|++.+|.... |.......+....|.-.+...+ ++.+.+ +. T Consensus 306 -~~~~~~l~~~i~~~~~~s~~p~~~~~~~~~------N~Sg~Ai~~~~~~l~~k~~~~~~~f~~~l~~~~rl~~~~~g~~ 378 (456) T protein:vir:10 306 -TPMLSAIKEHIRQLSSATKTPLPMLMPDSA------NQSAEGAHNIEKGFLFKCEDRLSIAKIGLEAILVKALQIEGES 378 (456) T ss_pred -hHHHHHHHHHHHHHHhccCCChHHhccccc------ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC Confidence 238999999999999999999999975322 2222222233222222222221 111110 11 Q ss_pred c----eEeechhhhhcCChhhhhhhhhhcC Q lcl|Aclame:pro 343 E----VVRFAPYALGGHDQPAAAPGGQRSA 368 (368) Q Consensus 343 ~----~~~F~~~~Llr~D~~~ra~~~~~~~ 368 (368) + -+.|... +--+....|+...+.. T Consensus 379 ~~~~~~v~w~~~--~~~~~~~~ada~~kl~ 406 (456) T protein:vir:10 379 VEDTVDVSFESP--DRVTLGEKYSAASLAK 406 (456) T ss_pred cccceeEEecCC--CCcCHHHHHHHHHHHH Confidence 1 1334221 1122333344333321 No 202 >protein:vir:7987 Length: 456 # NCBI annotation: gp3 # Family: family:all:5096 # MgeID: mge:151 # MgeName: Che8 # Cross-refs: genbank:acc:NP_817341;genbank:gi:29565769;genbank:GeneID:1258964 Probab=72.00 E-value=0.19 Score=24.56 Aligned_cols=304 Identities=12% Similarity=0.017 Sum_probs=102.5 Q ss_pred EECCCceeccChHHHHHHH----------HHHhccch--hcccccHH-HHHHHHHh--cccccchhhhccchHHhhccCC Q lcl|Aclame:pro 39 FSFGDPVEVLDRRELLDYV----------ECMRMGQW--YEPPMPWD-GLARSFRA--AAHHSSAVYVKRNILVSTFIPH 103 (368) Q Consensus 39 ~~~g~p~~~~~~~~~~~~~----------~~~~~~~~--~~~p~~~~-~l~~~~r~--~~~~~~~~~~~~~~~l~~~~~n 103 (368) .+.-.|.-++. .+.... .-++.|.. -..+.... .+....+. ..+...++... ...+..| T Consensus 1 ~~~~t~~~~~~--~l~~~~~~~~~r~~~l~~Yy~g~~~i~~~~~~~~~~~~~~~~~~~~n~~~~ivd~~----~~~l~~~ 74 (456) T protein:vir:79 1 MTASTPAEWLP--VLTKRIDDGMSRVRLLARYSNGDAPLPELTRNTSAAWRSFQREARTNWGLMVRDSV----ADRIIPN 74 (456) T ss_pred CCCCCHHHHHH--HHHHHHHHHHHHHHHHHHHHhccCChhhcCcccChhhchhhhhhhcchHHHHHHHH----HhhhccC Confidence 11111211110 000000 00111111 00010000 00000000 00100000000 0001111 Q ss_pred CCc---------------------CHHHHHHHHHhHhhhCCeeEEEEecCCcceEEEEEecccccccccCCCe------- Q lcl|Aclame:pro 104 PLL---------------------SRATFERLVLDWQVFGNAYLERRENVLGGTIRLDTPLAKYVRRGLDLNT------- 155 (368) Q Consensus 104 ~~~---------------------~~~~~~~~~~~~ll~Gnay~~i~r~~~G~~~~L~~l~p~~v~~~~~~~~------- 155 (368) |.. -......++.+.+.+|.||..+..+.+|.+ .+..++|..+.+..+... T Consensus 75 g~~~~~~~d~~~~~~~~~~~~~n~~d~~~~~~~~~a~~~G~a~~~~~~~edg~~-~i~~~~p~~~~~i~d~~~~~~~~~~ 153 (456) T protein:vir:79 75 GITVGGSADSDLALRARRIWRDNRMDSVCKQWVKYGLDFGESYLTCWRRDDGTA-TITADSPETMVVSVDPLQPWRIRSA 153 (456) T ss_pred CeecCCCCCccHHHHHHHHHHhcChhHHHHHHHHHHhhcCeeEEEEeeCCCCce-EEEEeccceeEEEEcCCCCCceEEE Confidence 110 012223456688899999999998888876 577788877655433210 Q ss_pred --eEEEeC-----------CceEEEE----------------c------CccEEEecCCCC---cCCccccchhhHHHHH Q lcl|Aclame:pro 156 --YFFVQN-----------WQQPYTF----------------A------AGSVFHLQEPDI---NQEVYGLPEYLSALNA 197 (368) Q Consensus 156 --~~~~~~-----------~~~~~~~----------------~------~~dviH~r~~~~---~~~~~G~spi~~a~~~ 197 (368) ||.... ++..... . ..++-|.-...| .....|+|-++..... T Consensus 154 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pvv~~~N~~~~gd~e~v~~l 233 (456) T protein:vir:79 154 MRWWRDLDAESDFAIVWSGDGWQKFARPCFVQSSSRRRLVTRISDSWVPVGDAVVTGSPPPVVVYQNPDGMGEVEPHIDI 233 (456) T ss_pred EEEEEecCCceeEEEEEcCCceEEEEEEEEeeccccceeeeccCCceeecccccCCCCceeEEEecCCCCCchhhhhHHH Confidence 111000 1100000 0 001111100000 0112466666554443 Q ss_pred HHHHHHHHHHHHHHHhccCCCceeEEeCC--CCccHHHHHHH--HHHHHHhccccccccccccccCccccccccccccch Q lcl|Aclame:pro 198 TWLNESATLFRRRYYKNGSHAGFILYMTD--AAQKQEDVDTL--REAMKSAKGPGNFRNLFMYAPNGKKDGIQLLPVSEV 273 (368) Q Consensus 198 i~~~~~a~~~~~~~f~ng~~p~gil~~~~--~~l~~e~~~~~--k~~~~~~~g~~n~~~~~~l~~~g~~~g~~~~pl~~~ 273 (368) +.....+..-........+.|--++.-.+ ....++.-+.+ ...|.... +..+.+ +.+.++..+... T Consensus 234 iD~~~~~~s~~~~~~~~~a~~~~~~~G~~~~~~~~d~~g~~i~~~~~~~~~~-----~~~~~~-----~~~~~~~q~~~~ 303 (456) T protein:vir:79 234 INRINRAELQLLSTMAIQAFRQRALKSSEHRLPKVDENGNAIDYASIFEAAP-----GALWEL-----PPGVDIWESQTN 303 (456) T ss_pred HHHHHHHHHHHHHHHHHHhhHHHHHhcCCcccccccccccccchhhhhhhhc-----cccccC-----CCCcceeeeccc Confidence 33322221111111122222322221000 00001110111 12222221 122222 233444444322 Q ss_pred hhHHHHHHHHHHHHHHHHHHhCCChHHhcccccccccccCHHHHHHHHHHHHHHHHHHHHH--------HHHhh----cC Q lcl|Aclame:pro 274 AAKDEFWNIKNVTRDDQLAAHRVPPQLMGIIPNNTGGFGDVEKAAMVFARNEVKPLQDRLL--------AINDW----IG 341 (368) Q Consensus 274 ~~d~qf~e~~~~~~~~Ia~~fgVPp~~lg~~~~~~~~~sn~e~~~~~f~~~tl~P~~~~ie--------~l~~~----l~ 341 (368) .- ..|++..+..+.+|+..-++|++.+|....+ .......+....|.-.+...+ ++.+. .+ T Consensus 304 ~~-~~~~~~l~~~i~~i~~~t~~p~~~~~~~~~N------~Sg~Al~~~~~~l~~k~~~~~~~f~~~l~~~~~l~~~~~g 376 (456) T protein:vir:79 304 DF-TPMLSAIKEHIRQLSSATKTPLPMLMPDSAN------QSAEGAHNIEKGFLFKCEDRLSIAKIGLEAILVKALQIEG 376 (456) T ss_pred Ch-HHHHHHHHHHHHHHHhhcCCChhHhcccccC------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC Confidence 21 2388999999999999999999999853221 112222222222222222211 11111 11 Q ss_pred -cc----eEeechhhhhcCChhhhhhhhhhcC Q lcl|Aclame:pro 342 -DE----VVRFAPYALGGHDQPAAAPGGQRSA 368 (368) Q Consensus 342 -~~----~~~F~~~~Llr~D~~~ra~~~~~~~ 368 (368) .+ .+.|... +--+..+.|+.+.+.. T Consensus 377 ~~~~~~i~v~w~~~--~~~s~~~~ada~~kl~ 406 (456) T protein:vir:79 377 ESVEDTVDVSFESP--DRVTLGEKYSAASLAK 406 (456) T ss_pred CCccccceEEeCCC--CCcCHHHHHHHHHHHH Confidence 11 1344322 1123344555444432 No 203 >protein:vir:101418 Length: 569 # NCBI annotation: Prt # Family: family:all:9458 # MgeID: mge:1512 # MgeName: P1 # Cross-refs: genbank:acc:YP_006480;genbank:gi:46401636;genbank:GeneID:2777482 Probab=71.93 E-value=0.19 Score=24.55 Aligned_cols=360 Identities=13% Similarity=0.053 Sum_probs=139.4 Q ss_pred CCcCCCCcc-cccccccc---ccccCCCcchhhccccCceEEEE-CCCceeccC-----------hHHHHHHHHHHhccc Q lcl|Aclame:pro 1 MSRNKTRRA-ARAASAHV---RTANTDAPTEHHTDRAAQAEVFS-FGDPVEVLD-----------RRELLDYVECMRMGQ 64 (368) Q Consensus 1 m~~~k~~~~-~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~-~g~p~~~~~-----------~~~~~~~~~~~~~~~ 64 (368) |+-+|.--. -|++=... ...+..+-.....-..++.-.|| +|.|..... ..+ ..+.+....++ T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~p~~~~~~~~~~~~~~t~~~D-~~~~g~~~~~~ 79 (569) T protein:vir:10 1 MADNKITLSSVRKALAGVFKDNGERDNILLSALAVHGGSGYLFSRAGAPVQLSGFLGGKPGDSGMAGD-GLVDGSRFIFD 79 (569) T ss_pred CCcchhHHHHHHHHHhhhhhcCCccchhhhhhheeecCcceEEeecCcchhhhhhhccCccccchhhh-hHHHHHHHHhh Confidence 886652111 01100000 00111111111112223333443 565543211 111 11333334456 Q ss_pred hhcccccHHHHHH-HHHhccc--ccchhhh--cc------chHHhhc---cCCCCc----CH----------------HH Q lcl|Aclame:pro 65 WYEPPMPWDGLAR-SFRAAAH--HSSAVYV--KR------NILVSTF---IPHPLL----SR----------------AT 110 (368) Q Consensus 65 ~~~~p~~~~~l~~-~~r~~~~--~~~~~~~--~~------~~~l~~~---~~n~~~----~~----------------~~ 110 (368) ...+|-++..+-. ..+..++ -+..+.. .| ..-...+ .+|... .. .. T Consensus 80 ~~~~pr~R~qiY~~~eeM~~~p~Ia~AlniHVtaALggde~TGd~vfI~p~~~~~~a~~daakai~~el~~dl~~~iNr~ 159 (569) T protein:vir:10 80 EVQLPEDRLQRYPLLEEMAVYSTIATALNIHITHALSFDKKTGQTFSIVPVHNGNDSDYDAAQALCGELMNDIGRTINKE 159 (569) T ss_pred hccCchhHHHHHHHHHHHhcCchhhhhhhhhhheeecccccccceEEEEeecCCCCCcchHHHHHHHHHHHHHHHHHHHH Confidence 6677766554322 1221110 0000000 00 0000000 011110 00 11 Q ss_pred HHHHHHhHhhhCCeeEEEEecCCcceEEEE---EecccccccccCCC---ee---EEEeCCceEEEEcCccEEEecCCCC Q lcl|Aclame:pro 111 FERLVLDWQVFGNAYLERRENVLGGTIRLD---TPLAKYVRRGLDLN---TY---FFVQNWQQPYTFAAGSVFHLQEPDI 181 (368) Q Consensus 111 ~~~~~~~~ll~Gnay~~i~r~~~G~~~~L~---~l~p~~v~~~~~~~---~~---~~~~~~~~~~~~~~~dviH~r~~~~ 181 (368) ...+.++...+|.+|+.|--+...-++.|+ ...|.-++....++ +| |-....++.....+..++.+|.+-. T Consensus 160 ~~~lA~~~~aFGdsYaRiY~~~~~GV~dl~~s~yt~PsfIqpFE~g~~tvGF~~~~~~~~~~ti~~l~p~qm~rmKmPrm 239 (569) T protein:vir:10 160 VAGWAFIMSVFGVAYVRPYAKEGIGITSFECSYYTLPSFIKEFEVSGNLAGFSGDYLKDASGKMVFADPWAIIPMKIPYW 239 (569) T ss_pred hhHHHHHHHhhhhhheeeeccCCceeEEEEecccccccccchhhhcCceEEeecccCCccccceeeechhhhhhhcccce Confidence 223556788999999999865543455553 23455444332221 11 1111112222223333332221110 Q ss_pred ----------------------------cCCccccchhhHHHHHHHHH------HHHHHHHHHHHhccCCCceeEEeCCC Q lcl|Aclame:pro 182 ----------------------------NQEVYGLPEYLSALNATWLN------ESATLFRRRYYKNGSHAGFILYMTDA 227 (368) Q Consensus 182 ----------------------------~~~~~G~spi~~a~~~i~~~------~~a~~~~~~~f~ng~~p~gil~~~~~ 227 (368) .-..||-|=+..+-+..... +.+++++.+.- --+|.+.-. T Consensus 240 ~~i~q~~~v~~g~~~~~L~~d~~~~~Pi~psn~GgSFL~~ae~pf~~l~~Al~sL~~qri~dSv~------~~~Itlnm~ 313 (569) T protein:vir:10 240 RPKSNLMPVHTGHKAYSLLDNPEERTPIETQNYGTSLLEYAYEPYMNLRSAIRSLKATRFNASKI------DRIIGLAMN 313 (569) T ss_pred eeccccchhhhhhhheeecccccccccccchhhhhHHHHHHHhHHHHHHHHHHhccchhhHHHHH------hHHhhcccc Confidence 00235666665554433322 22333332221 122332222 Q ss_pred CccHHHH-----------HHHHHHHHHh-ccccccccccc-cccCcccc--ccccccccchhhHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 228 AQKQEDV-----------DTLREAMKSA-KGPGNFRNLFM-YAPNGKKD--GIQLLPVSEVAAKDEFWNIKNVTRDDQLA 292 (368) Q Consensus 228 ~l~~e~~-----------~~~k~~~~~~-~g~~n~~~~~~-l~~~g~~~--g~~~~pl~~~~~d~qf~e~~~~~~~~Ia~ 292 (368) .+++++. ++-++.+++. .|+.+.-.++. +.|-..|+ .+.+ .+..-+.+.-=+|---+.....|. T Consensus 314 gM~p~qr~~y~r~lt~~LKr~~d~ie~a~~gg~~~~~~~~H~LPv~gekq~~~tv-Dt~~~~A~~~gIEdvM~~~R~Lag 392 (569) T protein:vir:10 314 SLDPVKAADYSRTITQTLKRAADLMERRARGANNMPTVTNTLLPIMGDGKGQMTI-DTQTIQADINGIEDILTYMRQLAA 392 (569) T ss_pred CCCHHHHhHHHHHHHHHHHHHHHHHHHHhccCccccccceeeeeeecCccccccc-cccccccCcccHHHHHHHHHHHHh Confidence 3566553 3344555553 44444332221 22222122 1222 233333344345556678899999 Q ss_pred HhCCChHHhccccc------ccccccCHHH--HHHHHHHHHHHHHHHHHHH------HHhhcCc----ceEeech--hhh Q lcl|Aclame:pro 293 AHRVPPQLMGIIPN------NTGGFGDVEK--AAMVFARNEVKPLQDRLLA------INDWIGD----EVVRFAP--YAL 352 (368) Q Consensus 293 ~fgVPp~~lg~~~~------~~~~~sn~e~--~~~~f~~~tl~P~~~~ie~------l~~~l~~----~~~~F~~--~~L 352 (368) +.|+.+.|||..+- +.+.+-+..| ++...++..+.-+++++-. .|.++.+ +.|+|+- .+| T Consensus 393 aLGlD~SMlGwAD~LsGGLGeGG~frtSaQaa~RS~~iRqa~~e~in~iidiH~~fKYgevf~~~drP~~V~F~s~~tAl 472 (569) T protein:vir:10 393 ALGLDYTLLGWADQMSGGLGEGGFLRTAIQAAMRASWIQQGVEEFIQRAIDIHLAFKYGKVYPEGDRPYKIEFHSVNTAL 472 (569) T ss_pred hhccchhHhhHHHHhcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCcccCCCCcceEEEeccchHHH Confidence 99999999997542 1122222222 2445667777777766543 2333332 2466752 233 Q ss_pred hcCChhhhhhhhhhcC Q lcl|Aclame:pro 353 GGHDQPAAAPGGQRSA 368 (368) Q Consensus 353 lr~D~~~ra~~~~~~~ 368 (368) .+--.-++-.++.-++ T Consensus 473 ~~E~~~n~~~raN~a~ 488 (569) T protein:vir:10 473 QQEHNDNRDSQANYAT 488 (569) T ss_pred HHHHHhHHHHHHHHHH Confidence 2222222222222122 No 204 >protein:vir:94709 Length: 522 # NCBI annotation: head to tail connector # Family: family:all:481 # MgeID: mge:1528 # MgeName: K1F # Cross-refs: genbank:acc:YP_338118;genbank:gi:77118196;genbank:GeneID:3707732 Probab=71.28 E-value=0.2 Score=24.44 Aligned_cols=340 Identities=12% Similarity=0.018 Sum_probs=126.3 Q ss_pred CCcCCCC-----ccccccccccc--cccCCCcchhhccccCceEEEECC-----CceeccChHHHHHHHHHHhc---cch Q lcl|Aclame:pro 1 MSRNKTR-----RAARAASAHVR--TANTDAPTEHHTDRAAQAEVFSFG-----DPVEVLDRRELLDYVECMRM---GQW 65 (368) Q Consensus 1 m~~~k~~-----~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~g-----~p~~~~~~~~~~~~~~~~~~---~~~ 65 (368) |+.|-.. +++...-...+ .-+.--...+.+ .+ +...+..+ ....+.+.. ..++..... +.+ T Consensus 1 ~~~~~~~~~~~~~~r~~~l~~~R~~~e~~w~e~~~y~-lP-~~~~~~~~~~~~~~~~~~dst~--~~a~~~Las~l~~~l 76 (522) T protein:vir:94 1 MAEREGFAAEGAKAVYDRLKNGRQPYETRAQNCAAVT-IP-SLFPKESDNSSTEYTTPWQAVG--ARCLNNLAAKLMLAL 76 (522) T ss_pred CcccchhhHHHHHHHHHHHHHHhhHHHHHHHHHHHHh-cc-cccCCCCCcccccccccccccH--HHHHHHHHHHHHhhc Confidence 7764321 11111000000 000000000000 00 00000000 001111111 112221111 122 Q ss_pred hcccccHHHHHHHH----Hhccccc--chh--h-hccchHHhhccCCCCcCHHHHHHHHHhHhhhCCeeEEEEecCCcce Q lcl|Aclame:pro 66 YEPPMPWDGLARSF----RAAAHHS--SAV--Y-VKRNILVSTFIPHPLLSRATFERLVLDWQVFGNAYLERRENVLGGT 136 (368) Q Consensus 66 ~~~p~~~~~l~~~~----r~~~~~~--~~~--~-~~~~~~l~~~~~n~~~~~~~~~~~~~~~ll~Gnay~~i~r~~~G~~ 136 (368) . |.-+|..+...- ....... ..+ + .+....+...... ...+.-+..++.|++.+|||..++..+..|.+ T Consensus 77 t-P~~~WFrl~~~d~~~~~~~~~~~~~~~v~~~L~~ve~~~~~~~~~-snf~~~~~~~~~~L~~~G~a~l~~~~~~~~~~ 154 (522) T protein:vir:94 77 F-PQSPWMRLTVSEYEAKTLSQDSEAAARVDEGLAMVERVLMAYMET-NSFRVPLFEALKQLIVSGNCLLYIPEPEQGTY 154 (522) T ss_pred C-CCCcccccccchhhhhccCcccchhHHHHHHHHHHHHHHHHHHHh-cCcHHHHHHHHHHHHhhCcEeEeeeccCCCce Confidence 1 211232221110 0000000 000 0 0000111111111 11334556678899999999999987766655 Q ss_pred E--EEEEecccccccccCCC--------------------------------e--eEE-E-e-C---------CceEEE- Q lcl|Aclame:pro 137 I--RLDTPLAKYVRRGLDLN--------------------------------T--YFF-V-Q-N---------WQQPYT- 167 (368) Q Consensus 137 ~--~L~~l~p~~v~~~~~~~--------------------------------~--~~~-~-~-~---------~~~~~~- 167 (368) . ..+|+..-.+.....+. . +|. + . . .|.... T Consensus 155 ~~~~~~pl~~y~v~~d~~G~vd~i~r~~~~~~~~l~~~~~~~~~~~~~~p~~~v~v~~~v~~~~~~~~~~~~~~g~~~~~ 234 (522) T protein:vir:94 155 SPMRMYRLVSYVVQRDAFGNILQIVTIDKVAFSALPEDVKSQLNADDYEPDTELEVYTHIYRQDDEYLRYEEVEGIEVTG 234 (522) T ss_pred eeEEEEEcceEEEeeCCCcCeEEEeeeeeccHHhcchHHHHHHhcccCCccceEEEEEEEEeeCCceeEEeeccCceecc Confidence 4 45565432222111110 0 000 0 0 0 111110 Q ss_pred ------EcCccEEEecCCCCcCCccccchhhHHHHHHHHHHHHHHHHHHHHhccCCCceeEEeCCCCccHHHHHHHHHHH Q lcl|Aclame:pro 168 ------FAAGSVFHLQEPDINQEVYGLPEYLSALNATWLNESATLFRRRYYKNGSHAGFILYMTDAAQKQEDVDTLREAM 241 (368) Q Consensus 168 ------~~~~dviH~r~~~~~~~~~G~spi~~a~~~i~~~~~a~~~~~~~f~ng~~p~gil~~~~~~l~~e~~~~~k~~~ 241 (368) |..-..+.+|.....+..||.||..-+.-.+...+...+-....-.-...|..++. +++.+.+... T Consensus 235 ~~~~~~~~e~P~~~~Rw~~~~ge~YGrgp~~~~l~D~k~L~~l~~~~l~~~~~~~~p~~~v~-~~g~~~~~~~------- 306 (522) T protein:vir:94 235 TDGSYPLTACPYIPVRMVRLDGEDYGRSYCEEYLGDLNSLETITEAITKMAKVASKVVGLVN-PNGITQPRRL------- 306 (522) T ss_pred cCCCCccccCCceeeeeeecCCCccccchHHHHHHHHHHHHHHHHHHHHHHHHHhCCceeec-ccccccchhe------- Confidence 11112445554444567999999999999998888888888888777788887664 4444443322 Q ss_pred HHhccccccccccccccCccccccccccccchhhHHH-HHHHHHHHHHHHHHHhCCChHHhcccccccccccCHHHHH-- Q lcl|Aclame:pro 242 KSAKGPGNFRNLFMYAPNGKKDGIQLLPVSEVAAKDE-FWNIKNVTRDDQLAAHRVPPQLMGIIPNNTGGFGDVEKAA-- 318 (368) Q Consensus 242 ~~~~g~~n~~~~~~l~~~g~~~g~~~~pl~~~~~d~q-f~e~~~~~~~~Ia~~fgVPp~~lg~~~~~~~~~sn~e~~~-- 318 (368) ..++.+ .++. |..++++..|+...+ |.+ -.+.-+..+..|-++|-+. +++......- +.++.. T Consensus 307 --~~~~~g---~~v~---g~~~~v~~~~~~~~~-~~~~~~~~i~~~~~rI~~af~~~--~~~~~~~~r~---TAtEV~~r 372 (522) T protein:vir:94 307 --NKAATG---EFVA---GRVEDINFLQLTKGQ-DFTIAKSVADAIEQRLGWAFLLN--SAVQRNAERV---TAEEIRYV 372 (522) T ss_pred --eccCCc---eeec---CCcccceeeeccccc-chhHHHHHHHHHHHHHHHHHhhh--hhccCCCccc---cHHHHHHH Confidence 111111 1111 112345555544322 232 2344455566788888655 2322222212 333322 Q ss_pred HHHHHHHHHHHHHHHHH------HHh---------hc---CcceEeechhh-hhcCChhhhhhhhhhcC Q lcl|Aclame:pro 319 MVFARNEVKPLQDRLLA------IND---------WI---GDEVVRFAPYA-LGGHDQPAAAPGGQRSA 368 (368) Q Consensus 319 ~~f~~~tl~P~~~~ie~------l~~---------~l---~~~~~~F~~~~-Llr~D~~~ra~~~~~~~ 368 (368) ..=....|.|.+.+|.+ +.+ .| +.+.++...-+ |-+.-....+++..+.+ T Consensus 373 ~~E~~~~LG~v~~rl~~E~l~Pli~r~~~il~r~g~lP~~p~~~v~v~~~s~La~~qr~~~~~~l~~~~ 441 (522) T protein:vir:94 373 AGELEATLGGVYSVQSQELQLPIVRVLMNQLQSAGMIPDLPKEAVEPTVSTGLEALGRGQDLEKLTQAV 441 (522) T ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcccEEeeEecHHHHHHHHHHHHHHHHHH Confidence 22334456666666642 111 12 12223322111 11100000011111111 No 205 >protein:vir:99781 Length: 511 # NCBI annotation: portal protein # Family: family:all:125 # MgeID: mge:1497 # MgeName: phiETA2 # Cross-refs: genbank:acc:YP_001004303;genbank:gi:122891757;genbank:GeneID:4712336 Probab=67.33 E-value=0.25 Score=23.85 Aligned_cols=324 Identities=12% Similarity=0.023 Sum_probs=117.4 Q ss_pred CCc----CCCC---cccccccccccccc-CCCcchhhccccCceEEEECCCceeccChHHHHHHHHHHhccchhcccccH Q lcl|Aclame:pro 1 MSR----NKTR---RAARAASAHVRTAN-TDAPTEHHTDRAAQAEVFSFGDPVEVLDRRELLDYVECMRMGQWYEPPMPW 72 (368) Q Consensus 1 m~~----~k~~---~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 72 (368) +++ ++.+ -.++-...|.-... ........ +... +..+-|.. +.+. ..+-....|+.+ T Consensus 49 i~~~~~~~~~r~~~l~~Yy~g~~~i~~~~~~~~~~~~----~~~k-i~~n~~k~------Iv~~----~~~yl~g~p~~~ 113 (511) T protein:vir:99 49 IEHHMDYQRPRLKVLSDYYEGKTKNLVELTRRKEEYM----ADNR-VAHDYASY------ISDF----INGYFLGNPIQY 113 (511) T ss_pred HHHHHHhhHHHHHHHHHHhcccCccccccCccccccc----Ccce-eecchHHH------HHHH----HHhhhcccCcee Confidence 111 1100 00010111100000 00000000 0000 01111111 1110 011112223322 Q ss_pred HHHHHHHHhcccccchhhhccchHHhh-ccCCCCcCHHHHHHHHHhHhhhCCeeEEEEecCCcceEEEEEeccccccccc Q lcl|Aclame:pro 73 DGLARSFRAAAHHSSAVYVKRNILVST-FIPHPLLSRATFERLVLDWQVFGNAYLERRENVLGGTIRLDTPLAKYVRRGL 151 (368) Q Consensus 73 ~~l~~~~r~~~~~~~~~~~~~~~~l~~-~~~n~~~~~~~~~~~~~~~ll~Gnay~~i~r~~~G~~~~L~~l~p~~v~~~~ 151 (368) .. .. .+....+.. +.-| .-......+..+.+.+|.+|.++.++.+|+ +.+..++|..+.+.. T Consensus 114 ~~---------~d-----~~~~~~l~~~~~~n--~~~~~~~~~~~~~~i~G~a~~~vy~ded~~-~~i~~~~p~~~~~vy 176 (511) T protein:vir:99 114 QD---------DD-----KDVLEAIEAFNDLN--DVESHNRSLGLDLSIYGKAYELMIRNQDDE-TRLYKSDAMSTFVIY 176 (511) T ss_pred ec---------Cc-----hHHHHHHHHHHhhc--CHhHHHHHHHHHHHhcCeeEEEEEeCCCCc-eEEEEEccceeEEEE Confidence 10 00 000111111 1111 122445667788999999999999988876 456677777765543 Q ss_pred CCC---------eeEEEe-CC----ce---EEEEcCccEEEecCCCC-------------------------cCCccccc Q lcl|Aclame:pro 152 DLN---------TYFFVQ-NW----QQ---PYTFAAGSVFHLQEPDI-------------------------NQEVYGLP 189 (368) Q Consensus 152 ~~~---------~~~~~~-~~----~~---~~~~~~~dviH~r~~~~-------------------------~~~~~G~s 189 (368) +.. .||.+. .+ +. ...+.++.|.+++..+. .+.-.|.| T Consensus 177 d~~~~~~~~~~vr~~~~~~~~~~~~~~~~~~~vyt~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~vPvv~~~nn~~g~s 256 (511) T protein:vir:99 177 DNTIERNSIAGVRYLRTKPIDKTDEDEVFTVDLFTSHGVYRYLTSRTNGLKLTPRENGFESHSFERMPITEFSNNERRKG 256 (511) T ss_pred cCCCCCceEEEEEEEEeeecccCccceEEEEEEEeCCcEEEEEecCCccccccccccccccCCCCccceEEecCCCCCCC Confidence 321 112111 00 00 11334444444321100 00124666 Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHhccCCCceeEEeCCCCccHHHHHHHHHHHHHhccccccccccccc--cCcccccccc Q lcl|Aclame:pro 190 EYLSALNATWLNESATLFRRRYYKNGSHAGFILYMTDAAQKQEDVDTLREAMKSAKGPGNFRNLFMYA--PNGKKDGIQL 267 (368) Q Consensus 190 pi~~a~~~i~~~~~a~~~~~~~f~ng~~p~gil~~~~~~l~~e~~~~~k~~~~~~~g~~n~~~~~~l~--~~g~~~g~~~ 267 (368) .+......|.....+..-..+.+...+.|-.++. .....+++.....++.- .-+........ ..+.+.+.++ T Consensus 257 d~e~v~~liDa~d~~~S~~~~~~~~~~~~~lv~~-G~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~d~ 330 (511) T protein:vir:99 257 DYEKVITLIDLYDNAESDTANYMSDLNDAMLLIK-GNLNLDPVEVRKQKEAN-----VLFLEPTVYADSEGRETEGSVDG 330 (511) T ss_pred chhhhHHHHHHHHHHHHHHHHHHHHhhchhhhhc-cCcccCchhhccccccc-----ceecccccccccccccCCCCcce Confidence 6665555555444333333333343444544443 11222333322222110 00000000000 0011234445 Q ss_pred ccccchhhHHHHHHHHHHHHHHHHHHhCCChHHhcccccccccccCHHHHHHHHHHHHH---------------HHHHHH Q lcl|Aclame:pro 268 LPVSEVAAKDEFWNIKNVTRDDQLAAHRVPPQLMGIIPNNTGGFGDVEKAAMVFARNEV---------------KPLQDR 332 (368) Q Consensus 268 ~pl~~~~~d~qf~e~~~~~~~~Ia~~fgVPp~~lg~~~~~~~~~sn~e~~~~~f~~~tl---------------~P~~~~ 332 (368) +.|+....+..+....+...+.|+..-++|....+...+ |.....+.+....+ .-.++. T Consensus 331 ~~l~~~~~~~~~e~~~~~L~~~I~~~s~~P~~~~~~~~g------n~Sg~Alk~~~~~l~~ka~~k~~~~~~~l~~~~~l 404 (511) T protein:vir:99 331 GYIYKQYDVQGTEAYKDRLNSDIHMFTNTPNMKDDNFSG------TQSGEAMKYKLFGLEQRTKTKEGLFTKGLRRRAKL 404 (511) T ss_pred eEEeecCCHHHHHHHHHHHHHHHHHHhCCcccccccccc------cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Confidence 555544445666777888889999999999865533222 22222222222211 111111 Q ss_pred HHHHHhhcCc-----c--eEeechhhhhcCChhhhhhhhhhcC Q lcl|Aclame:pro 333 LLAINDWIGD-----E--VVRFAPYALGGHDQPAAAPGGQRSA 368 (368) Q Consensus 333 ie~l~~~l~~-----~--~~~F~~~~Llr~D~~~ra~~~~~~~ 368 (368) +.++-...+. + -+++.+..-+-.|.+..++...+++ T Consensus 405 i~~~~~~~~~~~~~~~~~~i~i~f~~~~p~n~~e~~~~~~kl~ 447 (511) T protein:vir:99 405 LETILKNTRSIDVSKDFNTVRYVYNRNLPKSLIEELKAYIDSG 447 (511) T ss_pred HHHHHHhcCCcccccccccceEEeCCCCCcCHHHHHHHHHHHh Confidence 1111100111 1 1232222222345666666655555 No 206 >protein:vir:5961 Length: 503 # NCBI annotation: hypothetical protein # Family: family:all:125 # MgeID: mge:125 # MgeName: SPP1 # Cross-refs: genbank:acc:NP_690661;genbank:geneid:6329220;genbank:gi:22855055;interpro:IPR006428;uniprot:P54309;genbank:GeneID:955279 Probab=66.07 E-value=0.27 Score=23.67 Aligned_cols=328 Identities=8% Similarity=0.004 Sum_probs=111.4 Q ss_pred CCcCCCCccccccccccccccCCCcchh--hccccCceEEEECCCc--eeccChHHHHHHHHHHhccchhcccccHHHHH Q lcl|Aclame:pro 1 MSRNKTRRAARAASAHVRTANTDAPTEH--HTDRAAQAEVFSFGDP--VEVLDRRELLDYVECMRMGQWYEPPMPWDGLA 76 (368) Q Consensus 1 m~~~k~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~g~p--~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~ 76 (368) |.+.+ +++..+-..-=.....+.... ..+... ...-....| .-+.+.... .+.. ..+-+..-|+.+.. T Consensus 38 i~~~~--~~~~~~~~~YY~g~~~i~~~~~~~~~~~~-~~~~~~~~~~~ri~~n~~~~--ivd~-~~~yl~g~~~~~~~-- 109 (503) T protein:vir:59 38 IDEHN--PEPLLKGVRYYMCENDIEKKRRTYYDAAG-QQLVDDTKTNNRTSHAWHKL--FVDQ-KTQYLVGEPVTFTS-- 109 (503) T ss_pred HHhhc--HHHHHHHHHHhccccchhhccchhccccc-ccccccccccceeecchHHH--HHHH-HHhhhhcCCeeecc-- Confidence 22111 000000000000000000000 000000 000000000 000111000 0000 00111222322110 Q ss_pred HHHHhcccccchhhhccchHHhhccCCCCcCHHHHHHHHHhHhhhCCeeEEEEecCCcceEEEEEecccccccccCCC-- Q lcl|Aclame:pro 77 RSFRAAAHHSSAVYVKRNILVSTFIPHPLLSRATFERLVLDWQVFGNAYLERRENVLGGTIRLDTPLAKYVRRGLDLN-- 154 (368) Q Consensus 77 ~~~r~~~~~~~~~~~~~~~~l~~~~~n~~~~~~~~~~~~~~~ll~Gnay~~i~r~~~G~~~~L~~l~p~~v~~~~~~~-- 154 (368) .. .+....+..+..|. -......++.+.+.+|.+|..+..+.+|++ .+..++|..+.+..+.. T Consensus 110 -------~d-----~~~~~~l~~~~~n~--~~~~~~~~~~~~~~~G~~~~~v~~d~dg~~-~i~~~~p~~~~~i~d~~~~ 174 (503) T protein:vir:59 110 -------DN-----KTLLEYVNELADDD--FDDILNETVKNMSNKGIEYWHPFVDEEGEF-DYVIFPAEEMIVVYKDNTR 174 (503) T ss_pred -------Cc-----HHHHHHHHHHHhcC--HHHHHHHHHHHHhhCCeEEEEEeecCCCce-EEEEEccceeEEEEeCCCC Confidence 00 00011111122221 224455678889999999999999888875 47777777765543321 Q ss_pred --e-----eEEEe-CCce----EEEEcCccEEEecCC----------------------------------CCcCCcccc Q lcl|Aclame:pro 155 --T-----YFFVQ-NWQQ----PYTFAAGSVFHLQEP----------------------------------DINQEVYGL 188 (368) Q Consensus 155 --~-----~~~~~-~~~~----~~~~~~~dviH~r~~----------------------------------~~~~~~~G~ 188 (368) . ||... ..++ ...+.++.|.++..- .......|. T Consensus 175 ~~~~~~ir~~~~~~~~~~~~~~~evy~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vPiv~~~nn~~~~ 254 (503) T protein:vir:59 175 RDILFALRYYSYKGIMGEETQKAELYTDTHVYYYEKIDGVYQMDYSYGENNPRPHMTKGGQAIGWGRVPIIPFKNNEEMV 254 (503) T ss_pred CceEEEEEEEEEecCCCceEEEEEEEeCCcEEEEEEcCCcccccccccccccccceeecceeccCCccceEEecCCCCCC Confidence 0 12111 1111 112333333322110 000122477 Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHhccCCCceeEEeCCCCccHHHHHHHHHHHHHhccccccccccccccCccccccccc Q lcl|Aclame:pro 189 PEYLSALNATWLNESATLFRRRYYKNGSHAGFILYMTDAAQKQEDVDTLREAMKSAKGPGNFRNLFMYAPNGKKDGIQLL 268 (368) Q Consensus 189 spi~~a~~~i~~~~~a~~~~~~~f~ng~~p~gil~~~~~~l~~e~~~~~k~~~~~~~g~~n~~~~~~l~~~g~~~g~~~~ 268 (368) |.+..+...+.....+..-..+.+...+.|-.+++ +....+ .......+.. .+.+.+.. +.+++|. T Consensus 255 sd~~~~~~liDa~d~~~s~~~~~~~~~~~~~~v~~--g~~~~~--~~~~~~~~~~-------~~~~~~~~---~~~~~~l 320 (503) T protein:vir:59 255 SDLKFYKDLIDNYDSITSSTMDSFSDFQQIVYVLK--NYDGEN--PKEFTANLRY-------HSVIKVSG---DGGVDTL 320 (503) T ss_pred cchhhhHHHHHHHHHHHHHHHHHHHHhcCCeeEee--cCCccc--cchhhhhhhc-------ccceeccC---CCcceeE Confidence 76666555555544444444444555666766654 322221 1111122211 12222222 2234443 Q ss_pred cccchhhHHHHHHHHHHHHHHHHHHhCCChHHhcccccccccccCHHH----------HHHHHHHHHHHHHHHHHHHHHh Q lcl|Aclame:pro 269 PVSEVAAKDEFWNIKNVTRDDQLAAHRVPPQLMGIIPNNTGGFGDVEK----------AAMVFARNEVKPLQDRLLAIND 338 (368) Q Consensus 269 pl~~~~~d~qf~e~~~~~~~~Ia~~fgVPp~~lg~~~~~~~~~sn~e~----------~~~~f~~~tl~P~~~~ie~l~~ 338 (368) . .......+.+..+...+.|...-++|..-.+...++ .++..++. .....+...|.-.++.+.++-. T Consensus 321 ~--~~~~~~~~~~~~~~l~~~i~~~s~~p~~~~~~~~~~-~Sg~Ai~~~~~~l~~k~~~~~~~~~~~l~~~~~~i~~~~~ 397 (503) T protein:vir:59 321 R--AEIPVDSAAKELERIQDELYKSAQAVDNSPETIGGG-ATGPALENLYALLDLKANMAERKIRAGLRLFFWFFAEYLR 397 (503) T ss_pred e--ccCCHHHHHHHHHHHHHHHHHHhcccCCCccccccc-ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Confidence 3 223334455555666667777767764322211111 11111111 1111122222222222222111 Q ss_pred hcC-c-----ceEeechhhhhcCChhhhhhhhhhc--C Q lcl|Aclame:pro 339 WIG-D-----EVVRFAPYALGGHDQPAAAPGGQRS--A 368 (368) Q Consensus 339 ~l~-~-----~~~~F~~~~Llr~D~~~ra~~~~~~--~ 368 (368) ..+ . .-+.+.+..-+--|....++...++ | T Consensus 398 ~~~~~~~~~~~~i~i~f~~~~p~d~~~~~~~~~kl~~~ 435 (503) T protein:vir:59 398 NTGKGDFNPDKELTMTFTRTRIQNDSEIVQSLVQGVTG 435 (503) T ss_pred hccCcccccccceeEEeCCCCCCCHHHHHHHHHHHHhC Confidence 111 0 1123322233334555555544444 2 No 207 >protein:vir:96179 Length: 468 # NCBI annotation: ORF007 # Family: family:all:125 # MgeID: mge:1602 # MgeName: 37 # Cross-refs: genbank:acc:YP_240075;genbank:gi:66395736;genbank:GeneID:5133166 Probab=60.72 E-value=0.37 Score=22.97 Aligned_cols=319 Identities=9% Similarity=0.035 Sum_probs=110.8 Q ss_pred CCcCCCCcccc------ccccccccccCCCcch-hhccccCceEEEECCCceeccChHHHHHHHHHHhccchhcccccHH Q lcl|Aclame:pro 1 MSRNKTRRAAR------AASAHVRTANTDAPTE-HHTDRAAQAEVFSFGDPVEVLDRRELLDYVECMRMGQWYEPPMPWD 73 (368) Q Consensus 1 m~~~k~~~~~~------~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 73 (368) +++.+.+.++. -...|.-.....-... -......+-.-+.++-+-. +.+. ..+-....|+.+. T Consensus 35 i~~~~~~~~~~~~~~~yY~g~~~i~~~~~~~~~~~~~~~~~~~~ki~~n~~~~------Iv~~----~~~~l~g~p~~~~ 104 (468) T protein:vir:96 35 ITKHKENVEDITVGERYYNHQPDVLFNAPKRNVKGEIDPFKPDWRMYTNYHQN------LVDQ----KVAYAVANPVTYG 104 (468) T ss_pred HHHHHHHHHHHHHHHHHhcCCCccccccccccccccccccccccccccchHHH------HHHH----HHhhhccCCceec Confidence 00000000000 0000000000000000 0000000000000000000 1110 0011112232221 Q ss_pred HHHHHHHhcccccchhhhccchHHhhccCCCCcCHHHHHHHHHhHhhhCCeeEEEEecCCcceEEEEEecccccccccCC Q lcl|Aclame:pro 74 GLARSFRAAAHHSSAVYVKRNILVSTFIPHPLLSRATFERLVLDWQVFGNAYLERRENVLGGTIRLDTPLAKYVRRGLDL 153 (368) Q Consensus 74 ~l~~~~r~~~~~~~~~~~~~~~~l~~~~~n~~~~~~~~~~~~~~~ll~Gnay~~i~r~~~G~~~~L~~l~p~~v~~~~~~ 153 (368) + .. .+....+..+..|. .......++.+.+.+|.+|..+..+.+|+ +.+..++|..+.+..+. T Consensus 105 ~---------~d-----~~~~~~l~~~~~n~--~~~~~~~~~~~~~~~G~~~~~v~~d~~~~-~~i~~~~p~~~~~v~~~ 167 (468) T protein:vir:96 105 T---------ED-----EKSLKTIQEVLNHK--WDDKLVDILTAASNKGVEWIQPYVDEQGE-FKTFRVPAEQAIPIWTN 167 (468) T ss_pred c---------CC-----hHHHHHHHHHHhcC--HHHHHHHHHHHHhhcCeEEEEEEEcCCCc-eEEEEEcccceEEEEcC Confidence 0 00 00111111111221 12344567788999999999998888876 45666777666544321 Q ss_pred ----Ce-----eEEEeCCceEEEEcCccEEEecCCC-------------------------C---------cCCccccch Q lcl|Aclame:pro 154 ----NT-----YFFVQNWQQPYTFAAGSVFHLQEPD-------------------------I---------NQEVYGLPE 190 (368) Q Consensus 154 ----~~-----~~~~~~~~~~~~~~~~dviH~r~~~-------------------------~---------~~~~~G~sp 190 (368) +. +|..........+.++.+.|++..+ + .+...|.|- T Consensus 168 ~~~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iPvv~~~n~~~g~sd 247 (468) T protein:vir:96 168 KERDELKAFIRLYELDGGERVEYWTANDVTFYELKDGQLIPDYYQGEEHVQAHYYVGNKSMSWNRVPFIPFKNNPQEVSD 247 (468) T ss_pred CCCCceEEEEEEEEecCceEEEEEeCCeEEEEEEcCCceeecccccccccccceeeccccccCCcccEEEecCCCCCCCc Confidence 11 1111111111112222222221100 0 012246666 Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhccCCCceeEEeCCCCccHHHHHHHHHHHHHhccccccccccccccCccccccccccc Q lcl|Aclame:pro 191 YLSALNATWLNESATLFRRRYYKNGSHAGFILYMTDAAQKQEDVDTLREAMKSAKGPGNFRNLFMYAPNGKKDGIQLLPV 270 (368) Q Consensus 191 i~~a~~~i~~~~~a~~~~~~~f~ng~~p~gil~~~~~~l~~e~~~~~k~~~~~~~g~~n~~~~~~l~~~g~~~g~~~~pl 270 (368) +......+.....+..-..+.+...+.|-.+++ +..+++ .+.+...++ .++.+.+..++ ..+++|.. T Consensus 248 ~e~v~~liDa~d~~~S~~~~~~~~~~~p~lv~~--g~~~~~--~~~~~~~~~-------~~~~i~~~~d~-~~~~~~l~- 314 (468) T protein:vir:96 248 LFMYKTIIDAMDKRLSDTQNTFDEATELIYVLK--GYEGED--LEEFMYNLK-------YYKAINVDGDG-SGGVDTIQ- 314 (468) T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhcCceeeee--cCCccc--cchhhhhhh-------cCceEEecCCC-CCcceEEe- Confidence 655555554444444444444555566655553 433322 111211121 12333332221 23345443 Q ss_pred cchhhHHHHHHHHHHHHHHHHHHhCCChHHhcccccccccccCHHHHHHHHHHHHHHHHHHH--------HHH----HHh Q lcl|Aclame:pro 271 SEVAAKDEFWNIKNVTRDDQLAAHRVPPQLMGIIPNNTGGFGDVEKAAMVFARNEVKPLQDR--------LLA----IND 338 (368) Q Consensus 271 ~~~~~d~qf~e~~~~~~~~Ia~~fgVPp~~lg~~~~~~~~~sn~e~~~~~f~~~tl~P~~~~--------ie~----l~~ 338 (368) .......+.+..+...+.|...-++|...-+-. + +|.....+.+....+.-.+.. |++ +.. T Consensus 315 -~~~~~~~~~~~~~~l~~~I~~~s~~p~~~~~~~----~--~n~Sg~Alk~~~~~l~~k~~~k~~~~~~~l~~~~~li~~ 387 (468) T protein:vir:96 315 -IDVPVQSAKEYLDMLRDYVIEFGQGVDFQQDKF----G--NSPSGIALKFMYSNLDLKANKLKNKTLTALQELLQYIID 387 (468) T ss_pred -ecCChHHHHHHHHHHHHHHHHHhCccccccccc----c--cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Confidence 333345566677788889999999986432111 1 122222222221111111111 111 112 Q ss_pred hcCcc------eEeechhhhhcCChhhhhhhhhhcC Q lcl|Aclame:pro 339 WIGDE------VVRFAPYALGGHDQPAAAPGGQRSA 368 (368) Q Consensus 339 ~l~~~------~~~F~~~~Llr~D~~~ra~~~~~~~ 368 (368) .++.. -+.|+... . -|....|+....+. T Consensus 388 ~~g~~~d~~~i~i~f~~~~-p-~d~~e~a~~~~~~g 421 (468) T protein:vir:96 388 FYKLSIKVQDVEITFNFNV-M-VNELEQSQIGVNSQ 421 (468) T ss_pred HhCCCcccceeeEEecCCC-C-cCHHHHHHHHHhcC Confidence 22222 14564222 2 33444455443333 No 208 >protein:vir:78227 Length: 480 # NCBI annotation: gp11 # Family: family:all:524 # MgeID: mge:1849 # MgeName: Bethlehem # Cross-refs: genbank:acc:YP_001491663;genbank:gi:157786487;genbank:GeneID:5625705 Probab=52.72 E-value=0.55 Score=22.02 Aligned_cols=295 Identities=12% Similarity=0.059 Sum_probs=103.4 Q ss_pred ccChHHHHHHH--------------HHHhccchh--cccccH-HHHHHHHHhcccccchhhhccchHHhhccCCCC---- Q lcl|Aclame:pro 47 VLDRRELLDYV--------------ECMRMGQWY--EPPMPW-DGLARSFRAAAHHSSAVYVKRNILVSTFIPHPL---- 105 (368) Q Consensus 47 ~~~~~~~~~~~--------------~~~~~~~~~--~~p~~~-~~l~~~~r~~~~~~~~~~~~~~~~l~~~~~n~~---- 105 (368) .+|..+.+.++ .-.+.|... ..+... ..+....-...+...++... .....+++. T Consensus 1 ~~t~~~~i~~L~~~~~~~~~r~~~l~~Yy~G~~~i~~~~~~~~~~~~~~~~~~n~~~~ivd~~----~~~l~~~g~~~~~ 76 (480) T protein:vir:78 1 MTTYHEHVERLQGLLARDLPNLLEAEAYRNGTRRLKTIGIGAPPELAYLDVQPGWVATYLRTL----SDRLDIEGFRISE 76 (480) T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccccchhHhhhhhhcchHHHHHHHH----HhhhccCceecCC Confidence 11111111111 001111110 000000 00000000000111000000 000011111 Q ss_pred ---------------cCHHHHHHHHHhHhhhCCeeEEEEec------CCcceEEEEEecccccccccCCC----e----- Q lcl|Aclame:pro 106 ---------------LSRATFERLVLDWQVFGNAYLERREN------VLGGTIRLDTPLAKYVRRGLDLN----T----- 155 (368) Q Consensus 106 ---------------~~~~~~~~~~~~~ll~Gnay~~i~r~------~~G~~~~L~~l~p~~v~~~~~~~----~----- 155 (368) --......+..+.+.+|.||..+.++ ..|. ..+..++|..+.+..+.. . T Consensus 77 d~~~~~~l~~i~~~N~~d~~~~~~~~~a~~~G~ay~~v~~~~~~~~d~~g~-~~i~~~~p~~~~~~~D~~~~~~~~~~i~ 155 (480) T protein:vir:78 77 DSEGLEELWNWWQANDLDEESVLGHDDSLTFGRSYITVSHPDVESGDPAGI-PLIRVESPLYMYAELDPRNTRRVTRAVR 155 (480) T ss_pred CchhHHHHHHHHHhcCHHHHHHHHHHHHhhcCceEEEEecCccccCCCCCe-eEEEEEcccceEEEEcCCCccceEEEEE Confidence 01123344667889999999998763 2344 346677777765544321 0 Q ss_pred eEEEeC-Cce---EEEEcCc-----------------------------cEEEecCCCCcCCccccchhh----HHHHHH Q lcl|Aclame:pro 156 YFFVQN-WQQ---PYTFAAG-----------------------------SVFHLQEPDINQEVYGLPEYL----SALNAT 198 (368) Q Consensus 156 ~~~~~~-~~~---~~~~~~~-----------------------------dviH~r~~~~~~~~~G~spi~----~a~~~i 198 (368) ||.... .+. ...+.++ .|+||++..-.++.+|.|-|. .+.+.+ T Consensus 156 ~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~vPvv~f~n~~~~~~~~G~s~i~~~v~~l~Da~ 235 (480) T protein:vir:78 156 LYTTRDDVAVPDRATLYLPDETVPLRRNGGLNDQWVVDGDVIKHGLGVVPVVPLTNDPRLGNRYGRSEISPELRKVTDAA 235 (480) T ss_pred EEEeecCCCceEEEEEEeCCeEEEEEecCCCccccccccccccCCCCCcceEEeecccccCCccCcccchhhHHHHHHHH Confidence 111000 000 0011111 245665432234567877654 223333 Q ss_pred HHHHHHHHHHHHHHhccCCCceeEEeCCCCccHHHHHHHHHHHHHhccccccccccccccCccccccccccccchhhHHH Q lcl|Aclame:pro 199 WLNESATLFRRRYYKNGSHAGFILYMTDAAQKQEDVDTLREAMKSAKGPGNFRNLFMYAPNGKKDGIQLLPVSEVAAKDE 278 (368) Q Consensus 199 ~~~~~a~~~~~~~f~ng~~p~gil~~~~~~l~~e~~~~~k~~~~~~~g~~n~~~~~~l~~~g~~~g~~~~pl~~~~~d~q 278 (368) .....-..-...+| +.|--+|. +..+.+...+.-...|.... +..+.+ .+ .+.++..+....- .. T Consensus 236 ~~~~s~~~~~~~~~---a~p~~~i~--G~~~~~~~~~~~~~~~~~~~-----~~~~~~--~~--~~~~~~~~~~~~~-~~ 300 (480) T protein:vir:78 236 SRTLMNLQSASQIL---GTPLRVIS--GVTTDELTNDGENTTLDIYY-----GRILTL--AS--EAAKISEFKAAEL-RN 300 (480) T ss_pred HHHHHHHHHHHHhh---cchhhhhh--cCCccccccccccchhhhhh-----hhhccC--CC--CCceEEecCccCH-HH Confidence 33222222222223 34544442 32222211111111122211 112222 11 2345554443221 22 Q ss_pred HHHHHHHHHHHHHHHhCCChHHhcccccccccccCHHHHHHHHHHHHHHHHHHHHH--------HH----HhhcCc---- Q lcl|Aclame:pro 279 FWNIKNVTRDDQLAAHRVPPQLMGIIPNNTGGFGDVEKAAMVFARNEVKPLQDRLL--------AI----NDWIGD---- 342 (368) Q Consensus 279 f~e~~~~~~~~Ia~~fgVPp~~lg~~~~~~~~~sn~e~~~~~f~~~tl~P~~~~ie--------~l----~~~l~~---- 342 (368) |++..+..+.+|+..=++|++.+|....+. ++.+. +.+....|.-.+.+.+ ++ ...++. T Consensus 301 ~~~~l~~~i~~~~~~~~~p~~~~g~~~~n~---~Sg~A--lk~~~~~l~~ka~~~~~~f~~~l~~~~~l~~~~~g~~~~~ 375 (480) T protein:vir:78 301 FAEEMEVFRKEAASITGLPPQYLSSSSENP---ASAEA--IIATDSRIVKMAERKGRIFGGAWERAMRIAMQIMGREVTE 375 (480) T ss_pred HHHHHHHHHHHHhcccCCChHHhccccCcc---hHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCccc Confidence 788888888999999999999998643221 11122 2222222222222211 11 111121 Q ss_pred ce----EeechhhhhcCChhhhhhhhhhcC Q lcl|Aclame:pro 343 EV----VRFAPYALGGHDQPAAAPGGQRSA 368 (368) Q Consensus 343 ~~----~~F~~~~Llr~D~~~ra~~~~~~~ 368 (368) ++ +.|... .--+.+..|+...+.+ T Consensus 376 ~~~~i~v~f~~~--~~~s~~~~ad~~~kl~ 403 (480) T protein:vir:78 376 EYTRLETVWRDP--STPTVAAKADAVSKLY 403 (480) T ss_pred cceeeeEEecCC--CCCCHHHHHHHHHHHH Confidence 11 234211 1112223333332221 No 209 >protein:vir:94546 Length: 506 # NCBI annotation: minor head protein # Family: family:all:125 # MgeID: mge:1510 # MgeName: phiJL-1 # Cross-refs: genbank:acc:YP_223886;genbank:gi:62327098;genbank:GeneID:5075562 Probab=52.55 E-value=0.55 Score=22.00 Aligned_cols=322 Identities=11% Similarity=0.039 Sum_probs=107.6 Q ss_pred CCcCC--CCccccccccccccccCCCcchhhccccCceEEEECCCceeccChHHHHHHHHHHhccchhcccccHHHHHHH Q lcl|Aclame:pro 1 MSRNK--TRRAARAASAHVRTANTDAPTEHHTDRAAQAEVFSFGDPVEVLDRRELLDYVECMRMGQWYEPPMPWDGLARS 78 (368) Q Consensus 1 m~~~k--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~ 78 (368) +.+++ ++-.++-...+......... ......+-.-+..+-+..+ .+. ..+-....|+.+.+-. T Consensus 36 ~~~~~r~~~l~~YY~g~~~~i~~~~~~---~~~~~~~~~ki~~n~~~~I------v~~----~~~~l~G~p~~~~~~d-- 100 (506) T protein:vir:94 36 NYQRPRLEMLDDYYQGYNLKILDKQSR---RHEDGKADHRATHSFAKYI------ADF----QTSYSVGNPINVKLPD-- 100 (506) T ss_pred HHHHHHHHHHHHHhcCCCccccccccc---cccccCCcceeecchHHHH------HHH----hhhhhcccCceeecCc-- Confidence 11110 00000000100000000000 0000000000011111111 000 0011112232211000 Q ss_pred HHhcccccchhhhccchHHhh-ccCCCCcCHHHHHHHHHhHhhhCCeeEEEEecCCcceEEEEEecccccccccCCCe-- Q lcl|Aclame:pro 79 FRAAAHHSSAVYVKRNILVST-FIPHPLLSRATFERLVLDWQVFGNAYLERRENVLGGTIRLDTPLAKYVRRGLDLNT-- 155 (368) Q Consensus 79 ~r~~~~~~~~~~~~~~~~l~~-~~~n~~~~~~~~~~~~~~~ll~Gnay~~i~r~~~G~~~~L~~l~p~~v~~~~~~~~-- 155 (368) .+....+.. +.-|. -......+..+.+.+|.+|..+..+.+|++ .+..++|..+-+..+... T Consensus 101 ------------~~~~~~l~~~~~~N~--~~~~~~~~~~~~~~~G~a~~~v~~ded~~~-~i~~~~p~~~~~v~dd~~~~ 165 (506) T protein:vir:94 101 ------------DGSNSGFDTFNKAND--VDAENYDLFLDMSRYGRAYEYVYRGEDNEE-HLAKLDPLDTFVIYSTDVDP 165 (506) T ss_pred ------------chHHHHHHHHHhccC--HhHHHHHHHHHHHhcCeEEEEEEecCCCee-EEEEEcccceEEEecCCCCC Confidence 000111111 11121 123455677888999999999999888764 466677766654432110 Q ss_pred -------eEEEe-CCce--------EEEEcCc-------------------------cEEEecCCCCcCCccccchhhHH Q lcl|Aclame:pro 156 -------YFFVQ-NWQQ--------PYTFAAG-------------------------SVFHLQEPDINQEVYGLPEYLSA 194 (368) Q Consensus 156 -------~~~~~-~~~~--------~~~~~~~-------------------------dviH~r~~~~~~~~~G~spi~~a 194 (368) +|... .++. ...+.+. .|+++++.. .|.|.+... T Consensus 166 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~yt~~~~~~~~~~~~~~~~~~~~~~~~g~vPvv~~~n~~-----~~~sd~e~~ 240 (506) T protein:vir:94 166 KPIMAVRYHQIELVDDNQVSTINYVPETWTADTYTLYNPTPIMGKMQVDTTKPITTFPVVEFKNSN-----FRLGDFENV 240 (506) T ss_pred ceEEEEEEEeeeeccCCceeEEEEEEEEEeCceEEEeccccCccceeccccccCCccceEEecCCC-----CCCCchhhh Confidence 11100 0000 0001111 134443211 244444333 Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCceeEEe---------------------CCCCccHHHHHHHHHHHHHhccccccccc Q lcl|Aclame:pro 195 LNATWLNESATLFRRRYYKNGSHAGFILYM---------------------TDAAQKQEDVDTLREAMKSAKGPGNFRNL 253 (368) Q Consensus 195 ~~~i~~~~~a~~~~~~~f~ng~~p~gil~~---------------------~~~~l~~e~~~~~k~~~~~~~g~~n~~~~ 253 (368) ...+..-..+..-..+.....+.|-.+|+- .......+..+.+ ..++. .+. T Consensus 241 ~~liDa~d~~~S~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-------~~~ 312 (506) T protein:vir:94 241 LPLIDLYDAAQSDTANYMTDLNEAMLIIQGDIDTLFEGSDMMNTIDPNDEDAMAKLAKDKLELI-KEMKD-------ANM 312 (506) T ss_pred HHHHHHHHHHHHHHHHHHHHhhhHHHHHhcCccccccchhccccccccccccccccccchhHHH-hhhhh-------cCe Confidence 333322222111111111111112222210 0000111111111 11111 112 Q ss_pred cccccCc----cccccccccccchhhHHHHHHHHHHHHHHHHHHhCCChHHhcccccccccccCHH----------HHHH Q lcl|Aclame:pro 254 FMYAPNG----KKDGIQLLPVSEVAAKDEFWNIKNVTRDDQLAAHRVPPQLMGIIPNNTGGFGDVE----------KAAM 319 (368) Q Consensus 254 ~~l~~~g----~~~g~~~~pl~~~~~d~qf~e~~~~~~~~Ia~~fgVPp~~lg~~~~~~~~~sn~e----------~~~~ 319 (368) +.+..++ ...+.+.+-|+.......+....+.....|...-++|..-.+...++ .++-.+. ...+ T Consensus 313 ~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~~~l~~~I~~~s~~p~~~~~~~~~n-~Sg~Aik~~~~~l~~k~~~k~ 391 (506) T protein:vir:94 313 LLLKSGMTVNGTQTSVDAKYINKTYDVVGSEAYKKRVAGDIHKFSHTPDLTDENFASN-SSGVAMQYKVLGTVELASTKR 391 (506) T ss_pred eeecccccccCccccccceeeeecCCHHHHHHHHHHHHHHHHHHhCcccccccccccc-chHHHHHHHHHHHHHHHHHHH Confidence 2222111 12233444455555566777778888999999999997443211111 1111111 1111 Q ss_pred HHHHHHHHHHHHHHHHHHhhcC----cc----eEeechhhhhcCChhhhhhhhhhcC Q lcl|Aclame:pro 320 VFARNEVKPLQDRLLAINDWIG----DE----VVRFAPYALGGHDQPAAAPGGQRSA 368 (368) Q Consensus 320 ~f~~~tl~P~~~~ie~l~~~l~----~~----~~~F~~~~Llr~D~~~ra~~~~~~~ 368 (368) .++...|...++.+.++-.... .+ -+.|+.. +--|....|+...+.+ T Consensus 392 ~~~~~~l~~~~~li~~~~~~~~~~~~~d~~~i~i~f~~~--~p~d~~e~a~~~~kl~ 446 (506) T protein:vir:94 392 RMFERGLYARYQIISDIENSIHGDWTFDPQELTFTFRDN--LPADNISQIKALVQAG 446 (506) T ss_pred HHHHHHHHHHHHHHHHHHHhcCCccccccccceEEeCCC--CCcCHHHHHHHHHHHh Confidence 2233333333333332211111 11 1345332 3355666666666666 No 210 >protein:vir:2500 Length: 501 # NCBI annotation: putative portal gp5 # Family: family:all:524 # MgeID: mge:53 # MgeName: TM4 # Cross-refs: genbank:acc:NP_569741;genbank:gi:18496891;genbank:GeneID:932330 Probab=42.16 E-value=0.9 Score=20.84 Aligned_cols=310 Identities=12% Similarity=0.056 Sum_probs=111.8 Q ss_pred CCcCCCCccccccccccccccCCCcchhhccccCceEEEECCCceeccChHHHHHHHH-HHhccchhcccccHHHHHHHH Q lcl|Aclame:pro 1 MSRNKTRRAARAASAHVRTANTDAPTEHHTDRAAQAEVFSFGDPVEVLDRRELLDYVE-CMRMGQWYEPPMPWDGLARSF 79 (368) Q Consensus 1 m~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~-~~~~~~~~~~p~~~~~l~~~~ 79 (368) |. .+.+ .....+.. . +. -|+-.++...+.+.+. ++..- ....| -+..+..++ T Consensus 1 ~~-----------------~~~~----~~~~~~~~-~-~~--~p~~~~~~~~~~~l~~~l~~~~-~~~~~-rl~~l~~YY 53 (501) T protein:vir:25 1 MT-----------------VPVD----VIADAPAA-D-VE--FPEDSMSREQLGALVADMWRLH-ISERQ-WLDRIYEYT 53 (501) T ss_pred Cc-----------------ccch----hhhccCcc-c-cc--CCcccCChHHHHHHHHHHHHHH-HHHHH-HHHHHHHHH Confidence 11 1111 00000000 0 00 1322233322222111 00000 00000 001111222 Q ss_pred Hhccc---ccchh-------hh--ccchHH-------hhccCCCCc------------------CHHHHHHHHHhHhhhC Q lcl|Aclame:pro 80 RAAAH---HSSAV-------YV--KRNILV-------STFIPHPLL------------------SRATFERLVLDWQVFG 122 (368) Q Consensus 80 r~~~~---~~~~~-------~~--~~~~~l-------~~~~~n~~~------------------~~~~~~~~~~~~ll~G 122 (368) +.... .+... .. -+++.- ....++++. -......+..+.+.+| T Consensus 54 ~G~~~~~~~~~~~~~~~~~~~~~~v~n~~~~ivd~~a~~l~~~gf~~~d~~~~~~l~~i~~~N~~d~~~~~~~~~a~i~G 133 (501) T protein:vir:25 54 KGLRGRPEVPEGASDEVKELAKLSVKNVLSLVRDSFAQNLSVVGYRNALAKENDPAWEMWQRNRMDARQAEVHRPALTYG 133 (501) T ss_pred hcCCCchhccccCChhhhhhHhhhhcChHHHHHHHHHhhhcccceecCCccchHHHHHHHHhcChhHHHHHHHHHHhhcC Confidence 11100 00000 00 001100 000122211 0122234567888999 Q ss_pred CeeEEEEecCCcceEEEEEeccccccccc-CC--C--e-----eEEEeCC-c---eEEEEcCc----------------- Q lcl|Aclame:pro 123 NAYLERRENVLGGTIRLDTPLAKYVRRGL-DL--N--T-----YFFVQNW-Q---QPYTFAAG----------------- 171 (368) Q Consensus 123 nay~~i~r~~~G~~~~L~~l~p~~v~~~~-~~--~--~-----~~~~~~~-~---~~~~~~~~----------------- 171 (368) .||..+.++..|. .+..++|..+.+.. +. + . ||....+ + ....+.+. T Consensus 134 ~ay~~v~~de~~~--~i~~~sp~~~~~iy~D~~~~~~~~~ai~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~ 211 (501) T protein:vir:25 134 ASYVTVTPTDEGP--VFRTRSPRQILAVYADPSVDAWPQYALETWVAQKDAKPHRRGVLYDDTYMYELDLGEVVLGDAGG 211 (501) T ss_pred ceEEEEecCCCCC--eEEEeccccEEEEEecCCCCcceeEEEEEEeeccccCcceeEEEecCeeEEEEecCceeeeeccc Confidence 9999999988774 35556777665332 11 1 0 1111100 0 00001110 Q ss_pred -----------------------------cEEEecCCCCcCCccccchhhHHH---HHHHHHHHHHHHHHHHHhccCCCc Q lcl|Aclame:pro 172 -----------------------------SVFHLQEPDINQEVYGLPEYLSAL---NATWLNESATLFRRRYYKNGSHAG 219 (368) Q Consensus 172 -----------------------------dviH~r~~~~~~~~~G~spi~~a~---~~i~~~~~a~~~~~~~f~ng~~p~ 219 (368) .|+||++..-.+ -+|.|.++... ..+.....-......|| +.|- T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~vPiv~f~N~~~~~-~~g~sdie~v~~l~Da~~~~~s~~~~~~e~~---a~p~ 287 (501) T protein:vir:25 212 GQATQQPVNVREVTDVIEHGATFEGKPVCPVVRFVNGRDAD-DMIVGEVAPLILLQQAINSVNFDRLIVSRFG---ANPQ 287 (501) T ss_pred cccccccccccccccccccccccCCccceeeEeccCccccC-ccccchhhhhHHHHHHHHHHHHHHHHHHHhh---ccHH Confidence 245554422112 24777555433 33333332222233333 3343 Q ss_pred eeEEeCCCCccHHHHHHHHHHHHHhccccccccccccccCccccccccccccchhhHHH-HHHHHHHHHHHHHHHhCCCh Q lcl|Aclame:pro 220 FILYMTDAAQKQEDVDTLREAMKSAKGPGNFRNLFMYAPNGKKDGIQLLPVSEVAAKDE-FWNIKNVTRDDQLAAHRVPP 298 (368) Q Consensus 220 gil~~~~~~l~~e~~~~~k~~~~~~~g~~n~~~~~~l~~~g~~~g~~~~pl~~~~~d~q-f~e~~~~~~~~Ia~~fgVPp 298 (368) -+|. +... +..+. |+.. .++++++. + .+.++..+. ..+++ |++..+..+.+|++.-++|+ T Consensus 288 ~~i~--G~~~--~~~~~----~~~~-----~~~i~~~~-~---~~~~~~q~~--~~~~~~~~~~l~~~i~~i~~~s~~P~ 348 (501) T protein:vir:25 288 RVIS--GWTG--SKAEV----LKAS-----ALRVWTFE-D---PEVKAQAFP--PASVEPYNLILEEMLQHVAMVAQISP 348 (501) T ss_pred HHHh--CCCC--Cccch----hhhc-----ccceeccC-C---CCceEEEec--ccChHHHHHHHHHHHHHHHhhcCCCh Confidence 3332 2212 22221 2211 23344332 2 234444333 23444 89999999999999999999 Q ss_pred HHhcccccccccccCHHHHHHHHHHHHHHHHHHHHHH-----HHh---h----cCc----c--eEeechhhhhcCChhhh Q lcl|Aclame:pro 299 QLMGIIPNNTGGFGDVEKAAMVFARNEVKPLQDRLLA-----IND---W----IGD----E--VVRFAPYALGGHDQPAA 360 (368) Q Consensus 299 ~~lg~~~~~~~~~sn~e~~~~~f~~~tl~P~~~~ie~-----l~~---~----l~~----~--~~~F~~~~Llr~D~~~r 360 (368) +.+|...+ |.......+....|.-...+.+. +.+ . .+. . -+++....-+--+.++. T Consensus 349 ~~~~~~~~------N~Sg~Al~~~~~~l~~ka~~k~~~f~~~l~~~~rl~~~~~~~~~~~~~~~i~v~w~~~~~~s~~~~ 422 (501) T protein:vir:25 349 AQVTGKMI------NVSAEALAAAEANQQRKLAAKRESFGESWEQLLRLAAEMDDDPDTAADSGAEVLWRDTEARSFGAV 422 (501) T ss_pred hhhccccC------ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccccceeeeEEecCCCCCCHHHH Confidence 99985432 22222333333333322222211 111 1 110 1 12222222222344555 Q ss_pred hhhhhhcC Q lcl|Aclame:pro 361 APGGQRSA 368 (368) Q Consensus 361 a~~~~~~~ 368 (368) |+...+.+ T Consensus 423 ada~~kl~ 430 (501) T protein:vir:25 423 VDGITKLA 430 (501) T ss_pred HHHHHHHH Confidence 55554433 No 211 >protein:vir:98265 Length: 524 # NCBI annotation: gp20 portal vertex of the head # Family: family:all:1036 # MgeID: mge:1667 # MgeName: RB43 # Cross-refs: genbank:acc:YP_239198;genbank:gi:66391673;genbank:GeneID:3416367 Probab=38.03 E-value=1.1 Score=20.38 Aligned_cols=349 Identities=10% Similarity=0.046 Sum_probs=135.4 Q ss_pred CCcCCCCcccccccccc-----ccccCCCcchhhcc------ccCceEEEECCCceeccChHHHHHHHHHHhccchhccc Q lcl|Aclame:pro 1 MSRNKTRRAARAASAHV-----RTANTDAPTEHHTD------RAAQAEVFSFGDPVEVLDRRELLDYVECMRMGQWYEPP 69 (368) Q Consensus 1 m~~~k~~~~~~~~~~~~-----~~~~~~~~~~~~~~------~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~p 69 (368) ++-+.+.-+........ .++|.....+.... ..+....-.+++.++...+ ....+...| +.+..| T Consensus 13 ~~~~~~~d~~~~~~~~~~~~~s~~~p~~~dGa~~i~~~~~~~~~~g~~~~~y~~~e~~~~~--~~eLI~~YR--~ma~~p 88 (524) T protein:vir:98 13 FKNFAREDEIELEQQLKNDTGSVAPPKNNDGAYEIETDLNNQKYAGVFQQFYSGQDPAIQN--KEQLINTYR--GIMSYP 88 (524) T ss_pred hhhhhhhhhhhHhhhhcCCcccccCCCCCCCceeecCCCCcceecceeeeeccccccccch--HHHHHHHHH--HHhhcc Confidence 33222111111111111 11111111110000 0111111113333332221 111111111 112222 Q ss_pred ccHHHHHHHHHhcc----cc------------cchhhhc----cchH--HhhccCCCCcCHHHHHHHHHhHhhhCCeeEE Q lcl|Aclame:pro 70 MPWDGLARSFRAAA----HH------------SSAVYVK----RNIL--VSTFIPHPLLSRATFERLVLDWQVFGNAYLE 127 (368) Q Consensus 70 ~~~~~l~~~~r~~~----~~------------~~~~~~~----~~~~--l~~~~~n~~~~~~~~~~~~~~~ll~Gnay~~ 127 (368) -.-.++..+.+-.. ++ +..+..+ -+.. ++.+. .--...+..|...|..|.. T Consensus 89 Evd~Av~eIVneaIv~~~~~~pV~l~L~~~~~s~~iK~kI~eeF~~Il~ll~F~-------~~~~~~fR~WYVDgRi~fh 161 (524) T protein:vir:98 89 EVENAVSEIIDDAIVNEQGKDIITMDLAKTNFSKAIQDKIVEEFDNVLNIYDFD-------NMGARLFRDWYVDSRIYFH 161 (524) T ss_pred chhhHHHhhhcceeEecCCCceEEEEecccccchHHHHHHHHHHHHHHHHhccc-------hhhhHHHhhhhhcceeEEE Confidence 22222222221100 00 0000000 0000 11111 1123456788999999999 Q ss_pred EEecCCcc--eEEEEEeccccccccc-----C--CC--------eeEEEeC-------------CceEEEEcCccEEEec Q lcl|Aclame:pro 128 RRENVLGG--TIRLDTPLAKYVRRGL-----D--LN--------TYFFVQN-------------WQQPYTFAAGSVFHLQ 177 (368) Q Consensus 128 i~r~~~G~--~~~L~~l~p~~v~~~~-----~--~~--------~~~~~~~-------------~~~~~~~~~~dviH~r 177 (368) ++-+.+.. +.+|..|+|.+++..+ . .. -||.+.. -+....++.+.|.|.. T Consensus 162 kiid~~~~kGI~ELr~lDPr~i~~vr~~~~~~~~~~~~v~~~~~e~f~Y~~~~~~~~~~g~~~~~~~~ikI~~dAIvy~h 241 (524) T protein:vir:98 162 KIMHKDESKGIRELRQLDPRCMELIRESITETLDGGVKVFRGYREFFVYSAPKAGYTYNGQIYQANQKIKIPRSAIVYAH 241 (524) T ss_pred EEEcCCCCcceeeeeeeCCccceeeeeccccccccchhhccceeeeeeeccCCCccccccceecCCCceeechhheeeec Confidence 98664433 8999999999886442 1 00 1333321 1233567777788775 Q ss_pred C--CCCcCCccccchhhHHHHHHHHHHHHHHHHHHHHhccCCCceeEEeCCCCc-cHHHHHHHHHHHHHhc--------- Q lcl|Aclame:pro 178 E--PDINQEVYGLPEYLSALNATWLNESATLFRRRYYKNGSHAGFILYMTDAAQ-KQEDVDTLREAMKSAK--------- 245 (368) Q Consensus 178 ~--~~~~~~~~G~spi~~a~~~i~~~~~a~~~~~~~f~ng~~p~gil~~~~~~l-~~e~~~~~k~~~~~~~--------- 245 (368) . .+.+.++ +|-+..|...+....-.++..-=|==.-|.-.-|+++.=+.| ...+.+-+++-+..++ T Consensus 242 SGL~d~~~~i--isyLhkAiKp~NQLkm~EDAlVIYRitRAPeRRvFYIDvGnlPk~KAeqYl~~im~k~kNklvYDa~T 319 (524) T protein:vir:98 242 SGLEDCSNNI--IGYLHRAVKPANQLRLLEDAMVIYRITRAPERRVFYIDVGQMGGNKATQYVNNIAQGLKNRVVYDART 319 (524) T ss_pred cCcccCCCCe--eeehhHhhHhHHhhHHHHhhHHHHhhhccccceEEEEecCCCCchhHHHHHHHHHHhcCceeEeeccC Confidence 2 3333332 466777666665554444443322222333344555432333 3334444555555443 Q ss_pred cc-cccccccccc--------cCccccccccccc--cchhhHHHHHHHHHHHHHHHHHHhCCChHHhcccc-cccccc-c Q lcl|Aclame:pro 246 GP-GNFRNLFMYA--------PNGKKDGIQLLPV--SEVAAKDEFWNIKNVTRDDQLAAHRVPPQLMGIIP-NNTGGF-G 312 (368) Q Consensus 246 g~-~n~~~~~~l~--------~~g~~~g~~~~pl--~~~~~d~qf~e~~~~~~~~Ia~~fgVPp~~lg~~~-~~~~~~-s 312 (368) |. .|..+.+.+. .|| .|.+++-| +.+.-+++-++ +-....-++.+||...|+..+ +-+.+. + T Consensus 320 Gevrddrk~msMlEDyWLpRReGg--rgTEItTLpggqnlgem~DV~---YF~kkLy~aLnVP~sRl~~~~~~f~~Gr~~ 394 (524) T protein:vir:98 320 GTVKNQQNNLSMTEDYWLMRRDGK--AITEVSTLPGGQNFSDMDDIK---WFNRKLYEALRVPLSRMPRDDGGMQIGGGG 394 (524) T ss_pred ceeeccccccchhhhhcccccCCC--CccceeeccccCCcChHHHHH---HHHHHHHHHhCCCceeccCCCCcccccccc Confidence 21 1222222211 122 23333333 34444444443 556789999999999986432 111111 2 Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHh-----hc------Cc-------ce--Eeechhh----hhcCC-hhhhhhhhhhc Q lcl|Aclame:pro 313 DVEKAAMVFARNEVKPLQDRLLAIND-----WI------GD-------EV--VRFAPYA----LGGHD-QPAAAPGGQRS 367 (368) Q Consensus 313 n~e~~~~~f~~~tl~P~~~~ie~l~~-----~l------~~-------~~--~~F~~~~----Llr~D-~~~ra~~~~~~ 367 (368) .+.-.-..|-+. |.-+..++.++.. +| .+ +. +.|..+. |.... ...|....+.. T Consensus 395 EItRDEiKF~KF-I~rLR~rFs~lf~~~L~~qLilKgiit~eew~~i~~~I~~~f~~Dn~f~ElKe~Eil~~R~~~l~~~ 473 (524) T protein:vir:98 395 EITRDELKFSKF-IRTLQIQFSPVLSDPLKTNLIAKKIITEDEWEENVSKISFVFQQDSYYAEVKDIEILERRLNLMSQV 473 (524) T ss_pred chhHHHHHHHHH-HHHHHHHHHHHHHHHHHHhhhhhcCCCHHHHHHHhhcceEEEeecchHHHHHHHHHHHHHHHHHHHh Confidence 222223334333 4444555544221 11 01 11 2333222 11111 01133333333 Q ss_pred C Q lcl|Aclame:pro 368 A 368 (368) Q Consensus 368 ~ 368 (368) . T Consensus 474 d 474 (524) T protein:vir:98 474 E 474 (524) T ss_pred c Confidence 3 No 212 >protein:vir:5665 Length: 511 # NCBI annotation: portal vertex protein of head # Family: family:all:1036 # MgeID: mge:119 # MgeName: KVP40 # Cross-refs: genbank:acc:NP_899604;genbank:gi:34419591;genbank:GeneID:2546036 Probab=30.44 E-value=1.6 Score=19.50 Aligned_cols=351 Identities=13% Similarity=0.095 Sum_probs=136.5 Q ss_pred CCcCCCCccccccccccccccCCCcchhhcccc----CceEEEECC--------CceeccChHHHHHHHHHHhccchhcc Q lcl|Aclame:pro 1 MSRNKTRRAARAASAHVRTANTDAPTEHHTDRA----AQAEVFSFG--------DPVEVLDRRELLDYVECMRMGQWYEP 68 (368) Q Consensus 1 m~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~g--------~p~~~~~~~~~~~~~~~~~~~~~~~~ 68 (368) |+-+.+.-..+.....+..+.+.++.. ..+.+ +....++++ +-+......++.. ..| +.+.. T Consensus 1 ~~~w~~~de~~~~~~~~~~~~S~~~p~-~~DGa~~i~~~~~~~~~~g~~~~~~~~~~~~~~~~eLI~---~YR--~ma~~ 74 (511) T protein:vir:56 1 MKFWTKEEEQDIQKIEKNPVRSFSAPD-NVDGAKEIHTNLLAPQLGHAIIPSDAQSEGTIPVKELIK---SYR--ALAEY 74 (511) T ss_pred CCCccchhhhhhhhhccCCcccccCCC-CCCCceEEecccccceecceeccccccccCccchHHHHH---HHH--HHhhc Confidence 443332111111111111111111110 01111 000000101 0111111112211 111 11111 Q ss_pred cccHHHHHHHHHhcc----cc------------cchhhhc----cchHHhhccCCCCcCHHHHHHHHHhHhhhCCeeEEE Q lcl|Aclame:pro 69 PMPWDGLARSFRAAA----HH------------SSAVYVK----RNILVSTFIPHPLLSRATFERLVLDWQVFGNAYLER 128 (368) Q Consensus 69 p~~~~~l~~~~r~~~----~~------------~~~~~~~----~~~~l~~~~~n~~~~~~~~~~~~~~~ll~Gnay~~i 128 (368) |-.-.++..+.+-.. ++ +..+..+ -+..+ |-+....--...+..|...|..|..+ T Consensus 75 pEvd~Av~eIvne~iv~d~~~~pV~l~ld~~~~s~~iK~kI~eeF~~Il-----~ll~F~~~~~~~fR~WYVDgRi~fHk 149 (511) T protein:vir:56 75 HEVDDAIQEIVDEAIVYENDKEVVWLNLDNTDFSENIKAKINEEFDRVV-----SLLQMRKHGYKWFRKWYVDSRIYFHK 149 (511) T ss_pred cchhhHHHHhhcceeEecCCCceEEEEecccCcchHHHHHHHHHHHHHH-----HHhccchhhhHHHhhhhhcceEEEEE Confidence 211122222211100 00 0000000 00000 00000011234567888999999999 Q ss_pred EecCCcceEEEEEecccccccccCC-----C---------eeEEEeCC--------------ceEEEEcCccEEEec--C Q lcl|Aclame:pro 129 RENVLGGTIRLDTPLAKYVRRGLDL-----N---------TYFFVQNW--------------QQPYTFAAGSVFHLQ--E 178 (368) Q Consensus 129 ~r~~~G~~~~L~~l~p~~v~~~~~~-----~---------~~~~~~~~--------------~~~~~~~~~dviH~r--~ 178 (368) +-|...-+.+|..|+|.+++..+.. + .||.+... .....++.+.|.|.. . T Consensus 150 iid~k~GI~eLr~lDPr~i~~vr~i~~~~~~~~~v~~~~~ey~~Y~~~~~~~~~~~~~~~~~~~~vkI~~daI~y~hSGL 229 (511) T protein:vir:56 150 ILDKDNNIIELRPLNPMKMELVREIQKETIDGVEVVKGTLEYYVYKQSDYKMPSWMSATNRAQTSFRIPKDAIVFAHSGL 229 (511) T ss_pred EeccccceeehhhcCcccchhhhhhhcccccccccccceeeeeEecCCCcccCcccccccccccceeechhheeeecccc Confidence 8777666999999999988754321 1 13444321 134667888885554 3 Q ss_pred CC-CcCCccccchhhHHHHHHHHHHHHHHHHHHHHhccCCCceeEEeCCCCc-cHHHHHHHHHHHHHhcc---------c Q lcl|Aclame:pro 179 PD-INQEVYGLPEYLSALNATWLNESATLFRRRYYKNGSHAGFILYMTDAAQ-KQEDVDTLREAMKSAKG---------P 247 (368) Q Consensus 179 ~~-~~~~~~G~spi~~a~~~i~~~~~a~~~~~~~f~ng~~p~gil~~~~~~l-~~e~~~~~k~~~~~~~g---------~ 247 (368) .+ ..+.-+.+|-+..|...+....-.++..-=|==.-|.-.-|+++.=+.| ...+.+=+++-+..++. . T Consensus 230 ~d~~~~~g~i~syLhkAiKp~NQLkm~EDAlVIYRitRAPeRRvFYIDVGnLPk~KAeqYl~~iM~k~kNklVYDa~TGe 309 (511) T protein:vir:56 230 MRGCADDPYIIGYLDRAIKPANQLKMLEDALVIYRLARAPERRVFYVDVGNLPTQKAQQYVNGIMQNVKNRVVYDTQTGQ 309 (511) T ss_pred eeccCCCCeeeccchhhhHHHHhhHHHHhhHHHHhhhccccceEEEEecCCCCchhHHHHHHHHHHhcCceEEEeccCce Confidence 22 2345578898888887777655555544333222333344554432233 22333334444443321 1 Q ss_pred -cccccccccc--------cCccccccccccc--cchhhHHHHHHHHHHHHHHHHHHhCCChHHhccccc-ccccccCHH Q lcl|Aclame:pro 248 -GNFRNLFMYA--------PNGKKDGIQLLPV--SEVAAKDEFWNIKNVTRDDQLAAHRVPPQLMGIIPN-NTGGFGDVE 315 (368) Q Consensus 248 -~n~~~~~~l~--------~~g~~~g~~~~pl--~~~~~d~qf~e~~~~~~~~Ia~~fgVPp~~lg~~~~-~~~~~sn~e 315 (368) .|..+.+.+. .|| .|.+++-| +.+.-+++-++ +-....-++.+||...|+.... ++-+++... T Consensus 310 v~ddrk~msMlEDyWLpRReGg--rgTEItTLpGgqnlgem~DV~---YF~kKLy~aLnVP~SRl~~e~q~~~f~~Gr~~ 384 (511) T protein:vir:56 310 VKNTTNAMSMLEDYYLPRREGS--KGTEVSTLPGGQSLGDIEDVL---YFNRKLYKAMRIPTSRAASEDQTGGINFGQGA 384 (511) T ss_pred eccchhhhhhHhhhcccccCCC--CccceeeccccCCcChHHHHH---HHHHHHHHHhCCCcccccCCCCccccccccch Confidence 1122222111 122 23333333 33444444443 5567899999999999964321 111212222 Q ss_pred HH---HHHHHHHHHHHHHHHHHHHHh-h----c------Cc-------ce--Eeechhh----hhcCC-hhhhhhhhhhc Q lcl|Aclame:pro 316 KA---AMVFARNEVKPLQDRLLAIND-W----I------GD-------EV--VRFAPYA----LGGHD-QPAAAPGGQRS 367 (368) Q Consensus 316 ~~---~~~f~~~tl~P~~~~ie~l~~-~----l------~~-------~~--~~F~~~~----Llr~D-~~~ra~~~~~~ 367 (368) +. -..|-+. |.-+..+|.++.. . | .+ +. +.|..+. |.... ...|....+.. T Consensus 385 EItRDEiKF~KF-I~RLR~rFs~lF~~~Lk~qLilKgiit~eeW~~i~~~I~~~f~~Dn~f~ElKe~Eil~~Rl~~l~~~ 463 (511) T protein:vir:56 385 EITRDELKFTKF-VKRLQTKFETVITDPLKHQLIVNNIITEEEWDANHEKLYVVFNQDSYFEEAKELEILNSRMNAMRDI 463 (511) T ss_pred hhhHHHHHHHHH-HHHHHHHHHHHHHHHHHHhhhhccCCCHHHHHHHhhcceEEeeecchHHHHHHHHHHHHHHHHHHHh Confidence 22 2334333 4444555544221 1 1 00 11 2333222 11110 01133333333 Q ss_pred C Q lcl|Aclame:pro 368 A 368 (368) Q Consensus 368 ~ 368 (368) . T Consensus 464 d 464 (511) T protein:vir:56 464 Q 464 (511) T ss_pred c Confidence 3 No 213 >protein:vir:80959 Length: 499 # NCBI annotation: gp3 # Family: family:all:898 # MgeID: mge:1886 # MgeName: A500 # Cross-refs: genbank:acc:YP_001468389;genbank:gi:157324963;genbank:GeneID:5601394 Probab=22.85 E-value=2.4 Score=18.51 Aligned_cols=328 Identities=11% Similarity=0.062 Sum_probs=119.6 Q ss_pred CCcCCCCccc--------------cccccccccccCCCc--c---hhhccccCceEEEECCCceeccChHHHHHHHHHHh Q lcl|Aclame:pro 1 MSRNKTRRAA--------------RAASAHVRTANTDAP--T---EHHTDRAAQAEVFSFGDPVEVLDRRELLDYVECMR 61 (368) Q Consensus 1 m~~~k~~~~~--------------~~~~~~~~~~~~~~~--~---~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~ 61 (368) |--++.-++. +... -.+.-.+..+ . .........-.-.+.+-| ..+.+-. . T Consensus 16 ~~~~~~~~~~~~~~~i~~~~~~~~~i~~-~~~~Y~g~~~~~~~~~~~~~~~~~~~~~~s~n~~------~~iv~~~---a 85 (499) T protein:vir:80 16 MGLLKSLKDVTDHKKVNANDEDYKYIDM-WKRLYQGNYAEWHNLNYEHNGNPVNRRQLSMNLP------KVTAKYM---S 85 (499) T ss_pred hccccchhhhhcCCCCcCCHHHHHHHHH-HHHHhcCCcchhhccccccCCCccccceeecchH------HHHHHHH---H Confidence 1111100000 0000 0000000000 0 000000000001111111 1111110 0 Q ss_pred ccchhcccccHHHHHHHHHhcccccchhhhccchHHhh-ccCCCCcCHHHHHHHHHhHhhhCCeeEEEEecCCcceEEEE Q lcl|Aclame:pro 62 MGQWYEPPMPWDGLARSFRAAAHHSSAVYVKRNILVST-FIPHPLLSRATFERLVLDWQVFGNAYLERRENVLGGTIRLD 140 (368) Q Consensus 62 ~~~~~~~p~~~~~l~~~~r~~~~~~~~~~~~~~~~l~~-~~~n~~~~~~~~~~~~~~~ll~Gnay~~i~r~~~G~~~~L~ 140 (368) +-+..-|+.+.+ .. . .....+.. +..| .-...+..++...+..|.+|+.+..|.+|++ .+. T Consensus 86 -~~l~~ep~~i~~---------~d-~----~~~e~l~~~~~~n--~f~~~~~~~~~~a~~~G~~~~~~~~D~~~~~-~i~ 147 (499) T protein:vir:80 86 -KLLFNEKVKINI---------DD-E----TAEEFVLNVLKTN--GFTKNMERYIEYGEAMGGFVIKVYHDGNKNV-KVS 147 (499) T ss_pred -HhhhCCcceEee---------CC-H----HHHHHHHHHHhhc--cHHHHHHHHHHHHhhcCcEEEEEEECCCCcE-EEE Confidence 001111221110 00 0 00111111 1111 1123456677788889999999999887764 355 Q ss_pred Eecccccccc-cCCC---------------eeEE-E----eCC---------------------ceEEEE-------cC- Q lcl|Aclame:pro 141 TPLAKYVRRG-LDLN---------------TYFF-V----QNW---------------------QQPYTF-------AA- 170 (368) Q Consensus 141 ~l~p~~v~~~-~~~~---------------~~~~-~----~~~---------------------~~~~~~-------~~- 170 (368) .++|..+-+. .+.+ .||. + ..+ |..+.+ .+ T Consensus 148 ~v~a~~~~Pi~~d~~~~~~~~f~~~~~~~~~~y~~lE~h~~~~~~~~~y~I~n~~~~~~~~~~lG~~v~l~~~~~~~~~~ 227 (499) T protein:vir:80 148 FATADCMYPLSNDSENVDECLIANSFHKNNKYYKLLEWNEWKGEKEEVYTVTTELYQSDDPNELGGKVSLKLLFNDIEPV 227 (499) T ss_pred EEcCCceEEEEecCCCeEEEEEEEEEeecCeEEEEEEEEEecccceeeEEEEEEEEeccCccccCcccchhhhccCcCCc Confidence 5555554321 1100 0110 0 000 111100 00 Q ss_pred -----c---cEEEecCCCCc----CCccccchhhHHHHHHHHHHHHHHHHHHHHhccCCCceeEEeCCCCccH---HHHH Q lcl|Aclame:pro 171 -----G---SVFHLQEPDIN----QEVYGLPEYLSALNATWLNESATLFRRRYYKNGSHAGFILYMTDAAQKQ---EDVD 235 (368) Q Consensus 171 -----~---dviH~r~~~~~----~~~~G~spi~~a~~~i~~~~~a~~~~~~~f~ng~~p~gil~~~~~~l~~---e~~~ 235 (368) - -+.||+.+.++ +..+|+|.+.-+...|......-.-..+-|..|- ...++ +...+.. ..-+ T Consensus 228 ~~~~~~~~p~f~~~~~~~~N~~~~~splG~S~~~~~~~lid~lD~~~s~~~~e~~~~~-~~i~v--~~~~l~~~~~~~g~ 304 (499) T protein:vir:80 228 VPLPSLTRPTFIYIKPNIANNKNLTSPLGISVYANALDTLKTLDLMFDSYYQEFKLGK-KKVLV--PSSFVKTAVNLDGS 304 (499) T ss_pred eeecCCCccceEeecCCccccccCCCccCCchHhhHHHHHHHHHHHHHHHHHHHHhcc-cceec--chhhhhccCCCCCC Confidence 0 03456544222 3356999988887777766555554455566543 22222 2111100 0000 Q ss_pred HHHHHHHHhccccccccccccccCccccccccccccchhhHHHHHHHHHHHHHHHHHHhCCChHHhcccccccccccCHH Q lcl|Aclame:pro 236 TLREAMKSAKGPGNFRNLFMYAPNGKKDGIQLLPVSEVAAKDEFWNIKNVTRDDQLAAHRVPPQLMGIIPNNTGGFGDVE 315 (368) Q Consensus 236 ~~k~~~~~~~g~~n~~~~~~l~~~g~~~g~~~~pl~~~~~d~qf~e~~~~~~~~Ia~~fgVPp~~lg~~~~~~~~~sn~e 315 (368) .. ..|.. .....+.+....+ +.+-.++.++..-.+.++.+..+....+|....|+++..+|....+.. +.. T Consensus 305 ~~-~~~~~---~~~~~~~~~~~~~--~~~~~i~~~~~~ir~e~~~~~l~~~l~~i~~~~g~s~~~fg~~~~g~~---TAt 375 (499) T protein:vir:80 305 TT-QYFDS---TDEAFFLYQGEQD--DNGKAIKDISVEIRSTEFIESINAMLRIYAMQVGLSAGTFTFDENGLK---TAT 375 (499) T ss_pred cc-cCCCc---ccceeeEeeccCC--CCcCceeEecCcCChHHHHHHHHHHHHHHHHhcCCChhhcCCCcccch---hHH Confidence 00 00100 0000111111111 122235555555556778888888999999999999999987543222 222 Q ss_pred HHH-------------HHHHHHHHHHHHHHHHHHHhhc--------CcceEeechhhhhcCChhhhhh--hhhhcC Q lcl|Aclame:pro 316 KAA-------------MVFARNEVKPLQDRLLAINDWI--------GDEVVRFAPYALGGHDQPAAAP--GGQRSA 368 (368) Q Consensus 316 ~~~-------------~~f~~~tl~P~~~~ie~l~~~l--------~~~~~~F~~~~Llr~D~~~ra~--~~~~~~ 368 (368) +.. +..++..|..++..+.++...+ ....+.|+++.-+--|..+.+. ...++| T Consensus 376 ei~s~~~~l~~~~~~~~~~~~~~l~~l~~~il~~~~~~~~~~~~~~~~~~v~v~f~d~i~~d~~~~~~~~~~~~~~ 451 (499) T protein:vir:80 376 EVVSEKSETYQTKNSHSQLIEQGIKEMIVSILEVGKLIKAYDGDTVELDTITVDFDDSIAQDEDTTINRYTTAKNQ 451 (499) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCCCccceEEEeCCCCCCCHHHHHHHHHHHHHc Confidence 221 1112223333333322221111 1112343333333345555443 333444 Done!