Query lcl|Aclame:protein:vir:79124|NCBI_annot:head completion/stabilization protein L|genbank:acc:YP_001165259;genbank:gi:145708084;genbank:GeneID:5247135 Match_columns 159 No_of_seqs 105 out of 216 Neff 5.8 Searched_HMMs 1612 Date Mon Dec 2 10:15:56 2013 Command /home/guerois/workspace/virfam/python/lib/hhsearch//hhsearch2 -i .//seq/seq_13 -d /home/guerois/workspace/virfam/python/profile_database/capsid_neck_tail.hhm -glob -cpu 7 -o .//seq/HHR/seq_13_vs_rec_db.hhr No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM 1 protein:vir:79124 Length: 159 100.0 9E-74 5.6E-77 421.1 17.7 159 1-159 1-159 (159) 2 protein:vir:79188 Length: 159 100.0 1.8E-73 1.1E-76 419.5 18.5 159 1-159 1-159 (159) 3 protein:vir:100333 Length: 171 100.0 7.3E-72 4.6E-75 410.6 17.0 159 1-159 13-171 (171) 4 protein:vir:1831 Length: 168 # 100.0 3.9E-71 2.4E-74 406.6 18.0 159 1-159 1-168 (168) 5 protein:vir:98558 Length: 168 100.0 7.3E-71 4.6E-74 405.1 18.0 159 1-159 1-168 (168) 6 protein:vir:6063 Length: 169 # 100.0 2.3E-70 1.4E-73 402.4 18.3 159 1-159 1-169 (169) 7 protein:vir:5696 Length: 169 # 100.0 2.3E-70 1.4E-73 402.4 18.1 159 1-159 1-169 (169) 8 protein:vir:1155 Length: 153 # 100.0 1.9E-70 1.2E-73 402.8 17.5 153 1-159 1-153 (153) 9 protein:vir:2018 Length: 169 # 100.0 3.4E-70 2.1E-73 401.4 18.2 159 1-159 1-169 (169) 10 protein:vir:272 Length: 153 # 100.0 5E-68 3.1E-71 389.5 17.5 152 3-159 1-153 (153) 11 protein:vir:78780 Length: 153 100.0 4.7E-68 2.9E-71 389.7 16.6 152 3-159 1-153 (153) 12 protein:vir:3748 Length: 150 # 100.0 1.1E-66 6.6E-70 382.3 17.6 150 3-159 1-150 (150) 13 protein:vir:3785 Length: 150 # 100.0 1.5E-66 9.1E-70 381.5 17.7 150 3-159 1-150 (150) 14 protein:vir:98858 Length: 150 100.0 1.4E-66 8.4E-70 381.7 16.8 150 3-159 1-150 (150) No 1 >protein:vir:79124 Length: 159 # NCBI annotation: head completion/stabilization protein L # Family: family:all:204 # MgeID: mge:1863 # MgeName: RSA1 # Cross-refs: genbank:acc:YP_001165259;genbank:gi:145708084;genbank:GeneID:5247135 Probab=100.00 E-value=9e-74 Score=421.05 Aligned_cols=159 Identities=100% Similarity=1.472 Sum_probs=158.2 Q ss_pred CCCCcCCCCCCCCCCCCCceecCCCcCCcCCHHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHH Q lcl|Aclame:pro 1 MSSFIAAAPVPTPAQPGGQPIGNDGFFPDIDVDQACAAMRLDGTVTPERLRAALVDAALSVNDELAAWKAQQLAAGFTEL 80 (159) Q Consensus 1 Ms~f~~~~~~~~~~~~~~~~I~ndgFwPdI~~~~~r~~~Ri~~~vt~~rl~~al~~A~~~VN~eL~~w~~~~~~~G~~~L 80 (159) ||||++++|.|+|.++.+.+|+||||||||++++||+.||||++||++||+++|+.||++||.+|..||+.|+++||.+| T Consensus 1 Ms~f~~~~~~~~~~~~~~~~I~n~gFwPdi~l~~fr~~~ri~~~vt~~rl~~al~~Ai~~VN~eL~~~~~~~~a~G~~~l 80 (159) T protein:vir:79 1 MSSFIAAAPVPTPAQPGGQPIGNDGFFPDIDVDQACAAMRLDGTVTPERLRAALVDAALSVNDELAAWKAQQLAAGFTEL 80 (159) T ss_pred CCccccCCCCCCCCCCCCceecCCCCCCcCCHHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccH Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred HhcccccCCchhHHHHHHHHHHHHHHHHHHHHHhccccccccccchhhhhhHHHHHHHHHHHHHHHHHhCCCCceeeeC Q lcl|Aclame:pro 81 GAVPGQWIDGRSRHVHRYLRAVHCTAAAWLMERYRSFDATAAGDRKAEAENTSVDDLRRDARWAVSDITGAARTTVELI 159 (159) Q Consensus 81 ~~Vp~~~i~g~s~~v~~Y~rAVy~~AkA~L~e~y~~~d~t~~g~~~ae~~~~~~d~l~r~a~~AIrdi~G~~r~~veLI 159 (159) ++||+++|||+|+++++|+|||||+|||+|+|+|++||+|++|+++++++++++++|||+++||||+|+|++|+||||| T Consensus 81 a~vp~~~i~ges~~~~~Y~rAVy~~AkA~Lle~y~~~d~t~~g~~~ae~~~~~~d~l~rda~~AIr~i~G~~r~tveLI 159 (159) T protein:vir:79 81 GAVPGQWIDGRSRHVHRYLRAVHCTAAAWLMERYRSFDATAAGDRKAEAENTSVDDLRRDARWAVSDITGAARTTVELI 159 (159) T ss_pred hhccccccCChhHHHHHHHHHHHHHHHHHHhHhhcCCCcchhhhhHhhhhhHhHHHHHHHHHHHHHHhhCCCCceeeeC Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999999999 No 2 >protein:vir:79188 Length: 159 # NCBI annotation: gp48, phage head completion protein (GPL) # Family: family:all:204 # MgeID: mge:1866 # MgeName: phiE202 # Cross-refs: genbank:acc:YP_001111079;genbank:gi:134288751;genbank:GeneID:4960707 Probab=100.00 E-value=1.8e-73 Score=419.46 Aligned_cols=159 Identities=55% Similarity=0.788 Sum_probs=157.8 Q ss_pred CCCCcCCCCCCCCCCCCCceecCCCcCCcCCHHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHH Q lcl|Aclame:pro 1 MSSFIAAAPVPTPAQPGGQPIGNDGFFPDIDVDQACAAMRLDGTVTPERLRAALVDAALSVNDELAAWKAQQLAAGFTEL 80 (159) Q Consensus 1 Ms~f~~~~~~~~~~~~~~~~I~ndgFwPdI~~~~~r~~~Ri~~~vt~~rl~~al~~A~~~VN~eL~~w~~~~~~~G~~~L 80 (159) ||||++++|++++.++.+.+|+||||||||++++||+.||||++||++||+++|+.||++||.+|..||+.|+++||++| T Consensus 1 M~sfv~~~~~~~~~~~~~~~I~n~gFwPdi~l~~fr~~~ri~~~vt~~rl~~al~~Ai~~VN~eL~~~~~~~~~~G~~~l 80 (159) T protein:vir:79 1 MNSFVATAAPAVAATPIEGTLTNDGFFPDIDLSALRDAMRLDGTVTAERLRHAARDALLTVNDELAAWRARQRAAGAATL 80 (159) T ss_pred CCCCcCCCCCCCCCCCCCceecCCCCCCcCCHHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhH Confidence 99999999998888999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred HhcccccCCchhHHHHHHHHHHHHHHHHHHHHHhccccccccccchhhhhhHHHHHHHHHHHHHHHHHhCCCCceeeeC Q lcl|Aclame:pro 81 GAVPGQWIDGRSRHVHRYLRAVHCTAAAWLMERYRSFDATAAGDRKAEAENTSVDDLRRDARWAVSDITGAARTTVELI 159 (159) Q Consensus 81 ~~Vp~~~i~g~s~~v~~Y~rAVy~~AkA~L~e~y~~~d~t~~g~~~ae~~~~~~d~l~r~a~~AIrdi~G~~r~~veLI 159 (159) ++||+++|||+|+++++|+|||||+|||+|+|+|++||+|++|+++++++++++++|||+++||||+|+|++|++|||| T Consensus 81 a~vp~~~i~ges~~~~~Y~rAVy~~AkA~Lle~y~~~d~t~~g~~~ae~~~~~~d~l~rda~~AIr~i~G~~r~tveLI 159 (159) T protein:vir:79 81 ADVPAPRIDGESAHVARYRRAVYHLTHADVTEKYRGYDTTKSGGQVAADLAATVDDSRRAARWAISDILGIARSTVELI 159 (159) T ss_pred HhccccccCchhHHHHHHHHHHHHHHHHHHhHhhcCCCcchhHhhHhhhhhHHHHHHHHHHHHHHHHhhCCCCceeeeC Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999999999 No 3 >protein:vir:100333 Length: 171 # NCBI annotation: head completion protein L # Family: family:all:204 # MgeID: mge:1484 # MgeName: phi-MhaA1-PHL101 # Cross-refs: genbank:acc:YP_655474;genbank:gi:109289942;genbank:GeneID:4157376 Probab=100.00 E-value=7.3e-72 Score=410.57 Aligned_cols=159 Identities=40% Similarity=0.607 Sum_probs=158.0 Q ss_pred CCCCcCCCCCCCCCCCCCceecCCCcCCcCCHHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHH Q lcl|Aclame:pro 1 MSSFIAAAPVPTPAQPGGQPIGNDGFFPDIDVDQACAAMRLDGTVTPERLRAALVDAALSVNDELAAWKAQQLAAGFTEL 80 (159) Q Consensus 1 Ms~f~~~~~~~~~~~~~~~~I~ndgFwPdI~~~~~r~~~Ri~~~vt~~rl~~al~~A~~~VN~eL~~w~~~~~~~G~~~L 80 (159) |+||.+++++++|.++++.+|+||||||||++++||+.||||++||++||+++|+.||++||.+|+.||+.|+++||++| T Consensus 13 ~~s~~~~~~~~~~~~~~~~~I~ndgFwPdI~l~efr~~~Ri~~~vt~~rl~~al~~Ai~~VN~eL~~~~~~~~a~G~~tL 92 (171) T protein:vir:10 13 VNGYESSKNAIKPTAESDETITNNGFFPNIELLEVRNAMRIDGTVINERLKQAVIEAMATVNADLKAYRLNAEQAQKANL 92 (171) T ss_pred cccccCCCCCCCCCCCCCceecCCCcCCcCCHHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCh Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred HhcccccCCchhHHHHHHHHHHHHHHHHHHHHHhccccccccccchhhhhhHHHHHHHHHHHHHHHHHhCCCCceeeeC Q lcl|Aclame:pro 81 GAVPGQWIDGRSRHVHRYLRAVHCTAAAWLMERYRSFDATAAGDRKAEAENTSVDDLRRDARWAVSDITGAARTTVELI 159 (159) Q Consensus 81 ~~Vp~~~i~g~s~~v~~Y~rAVy~~AkA~L~e~y~~~d~t~~g~~~ae~~~~~~d~l~r~a~~AIrdi~G~~r~~veLI 159 (159) ++||+++|||+|+++++|+|||||+|||+|+|+|++||+|++|+++++++++++++|||+++||||+|+|++|+||||| T Consensus 93 a~vp~~~i~ges~~v~~Y~rAVya~AkA~Lle~yr~~dtt~~g~~~ae~l~~~~d~l~rda~~AIr~i~G~~R~tVeLI 171 (171) T protein:vir:10 93 QACDDEQINGESVLVYKYKRAVYCLAVANLYERYRSYDSTKDGHDKAEELESTAGDLKRDYHFAVRDILGENRMISELI 171 (171) T ss_pred hhccccccCchhHHHHHHHHHHHHHHHHHHhhhhcCCcchHHHhhhhhhchhhHHHHHHHHHHHHHHHhCCCCceeeeC Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999999999 No 4 >protein:vir:1831 Length: 168 # NCBI annotation: Q protein # Family: family:all:204 # MgeID: mge:324 # MgeName: 186 # Cross-refs: genbank:acc:NP_052255;genbank:gi:9634062;genbank:GeneID:1262460 Probab=100.00 E-value=3.9e-71 Score=406.58 Aligned_cols=159 Identities=40% Similarity=0.635 Sum_probs=153.8 Q ss_pred CCCCcCCCCCC---------CCCCCCCceecCCCcCCcCCHHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 1 MSSFIAAAPVP---------TPAQPGGQPIGNDGFFPDIDVDQACAAMRLDGTVTPERLRAALVDAALSVNDELAAWKAQ 71 (159) Q Consensus 1 Ms~f~~~~~~~---------~~~~~~~~~I~ndgFwPdI~~~~~r~~~Ri~~~vt~~rl~~al~~A~~~VN~eL~~w~~~ 71 (159) |++|++++|.. +++++.+.+|+||||||||++++||+.||||++||++||+++|+.||++||.+|..||+. T Consensus 1 m~~~v~~~~~~p~~~~~f~~~~~~~~~~~I~ndgFwPdI~l~efr~~~ri~~~vt~~rl~~al~~Ai~~VN~eL~~~~~~ 80 (168) T protein:vir:18 1 MTTVILNQPDEPQDVPGVVIPAPETGGAVIKNTFFFPDVDPKRVRELMRLEQTVSDARLRNAIKTGMAETNAELYDYRLR 80 (168) T ss_pred CCcccCCCCCCCCCcccCCCCCCCCCCceecCCCCCCcCCHHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH Confidence 99999988743 255667889999999999999999999999999999999999999999999999999999 Q ss_pred HHHhhHHHHHhcccccCCchhHHHHHHHHHHHHHHHHHHHHHhccccccccccchhhhhhHHHHHHHHHHHHHHHHHhCC Q lcl|Aclame:pro 72 QLAAGFTELGAVPGQWIDGRSRHVHRYLRAVHCTAAAWLMERYRSFDATAAGDRKAEAENTSVDDLRRDARWAVSDITGA 151 (159) Q Consensus 72 ~~~~G~~~L~~Vp~~~i~g~s~~v~~Y~rAVy~~AkA~L~e~y~~~d~t~~g~~~ae~~~~~~d~l~r~a~~AIrdi~G~ 151 (159) |+++||++|++||+++|||+|+++++|+|||||+|||+|+|+|++||+|++|+++++++++++++|||+++||||+|+|+ T Consensus 81 ~~a~G~~~La~vp~~~i~ges~~v~~Y~rAVy~~AkA~Lle~y~~~dtt~~g~~~ae~l~~~~d~l~rda~~AIr~i~G~ 160 (168) T protein:vir:18 81 QTAAGFKQLADVPAEEIDGENVRVFHYLSAVTAMATATLYERYRGVEATGKGDKKADSVETTIDDLWRDMRWSVARLQDK 160 (168) T ss_pred HHHhhhhhHHhcchhhcCChhHHHHHHHHHHHHHHHHHHhHhhcCCCccHHHhhhhhhchhhHHHHHHHHHHHHHHHhCC Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred CCceeeeC Q lcl|Aclame:pro 152 ARTTVELI 159 (159) Q Consensus 152 ~r~~veLI 159 (159) +|+||||| T Consensus 161 ~R~tVeLI 168 (168) T protein:vir:18 161 PRCIVGQL 168 (168) T ss_pred CCceeecC Confidence 99999999 No 5 >protein:vir:98558 Length: 168 # NCBI annotation: gp7 # Family: family:all:204 # MgeID: mge:1533 # MgeName: PSP3 # Cross-refs: genbank:acc:NP_958062;genbank:gi:41057359;genbank:GeneID:2744229 Probab=100.00 E-value=7.3e-71 Score=405.08 Aligned_cols=159 Identities=39% Similarity=0.612 Sum_probs=153.0 Q ss_pred CCCCcCCCCCC---------CCCCCCCceecCCCcCCcCCHHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 1 MSSFIAAAPVP---------TPAQPGGQPIGNDGFFPDIDVDQACAAMRLDGTVTPERLRAALVDAALSVNDELAAWKAQ 71 (159) Q Consensus 1 Ms~f~~~~~~~---------~~~~~~~~~I~ndgFwPdI~~~~~r~~~Ri~~~vt~~rl~~al~~A~~~VN~eL~~w~~~ 71 (159) |++|++++|.. |++++++.+|+||||||||++++||+.||||++||++||+++|+.||++||.+|..||+. T Consensus 1 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~I~ndgFwPdI~l~efr~~~Ri~~~vt~~rl~~al~~Ai~~VN~eL~~~~~~ 80 (168) T protein:vir:98 1 MTTVILNQPDEPQDVPGVVIPVPETGDAVIKNTFFFPDVDPKRVRELMRLEQTVSDARLRHAIRTGMAETNAELYDYRLR 80 (168) T ss_pred CcccccCCCCCCCCCCccccCCCCCCCceecCCCCCCcCCHHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH Confidence 99999888731 234556789999999999999999999999999999999999999999999999999999 Q ss_pred HHHhhHHHHHhcccccCCchhHHHHHHHHHHHHHHHHHHHHHhccccccccccchhhhhhHHHHHHHHHHHHHHHHHhCC Q lcl|Aclame:pro 72 QLAAGFTELGAVPGQWIDGRSRHVHRYLRAVHCTAAAWLMERYRSFDATAAGDRKAEAENTSVDDLRRDARWAVSDITGA 151 (159) Q Consensus 72 ~~~~G~~~L~~Vp~~~i~g~s~~v~~Y~rAVy~~AkA~L~e~y~~~d~t~~g~~~ae~~~~~~d~l~r~a~~AIrdi~G~ 151 (159) |+++||++|++||+++|||+|+++++|+|||||+|||+|+|+|++||+|++|+++++++++++++|||+++||||+|+|+ T Consensus 81 ~~a~G~~tLa~Vp~~~i~ges~~v~~Y~rAVya~AkA~Lle~yr~~dtt~~g~~~ae~l~~~~d~l~rda~~AIr~i~G~ 160 (168) T protein:vir:98 81 QTAAGFKHLADVPAEEIDGENVRIFHYLSAVTAMATATLYERYRGVEATGKGDKKADSVETTIDDLWRDMRWSVARLQDK 160 (168) T ss_pred HHHhhhhhHHhcchhhcCChhHHHHHHHHHHHHHHHHHHhHhhcCCCcchhhhhhhhhchhhHHHHHHHHHHHHHHHhCC Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred CCceeeeC Q lcl|Aclame:pro 152 ARTTVELI 159 (159) Q Consensus 152 ~r~~veLI 159 (159) +|+||||| T Consensus 161 ~R~tVeLI 168 (168) T protein:vir:98 161 PRCIVGQL 168 (168) T ss_pred CCceeeeC Confidence 99999999 No 6 >protein:vir:6063 Length: 169 # NCBI annotation: gpL # Family: family:all:204 # MgeID: mge:126 # MgeName: WPhi # Cross-refs: genbank:acc:NP_878204;genbank:gi:33438903;genbank:GeneID:1457738 Probab=100.00 E-value=2.3e-70 Score=402.39 Aligned_cols=159 Identities=42% Similarity=0.611 Sum_probs=151.9 Q ss_pred CCCCcCCCCCC----------CCCCCCCceecCCCcCCcCCHHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 1 MSSFIAAAPVP----------TPAQPGGQPIGNDGFFPDIDVDQACAAMRLDGTVTPERLRAALVDAALSVNDELAAWKA 70 (159) Q Consensus 1 Ms~f~~~~~~~----------~~~~~~~~~I~ndgFwPdI~~~~~r~~~Ri~~~vt~~rl~~al~~A~~~VN~eL~~w~~ 70 (159) |.||+++.|++ +++++.+.+|+||||||||++++||+.||||++||++||+++|+.||++||.+|..||+ T Consensus 1 m~~~~a~~~~~~~s~~~~~~~p~~~~~~~~I~n~gFwPdI~l~efr~~~Ri~~~vt~~rl~~al~~Ai~~VN~eL~~~~~ 80 (169) T protein:vir:60 1 MMTLIIPRKEAPVSGEGTVVIPQPAGDEPVIKNTFFFPDIDPKRVRERMRLEQTVAPARLREAIKSGMAETNAELYEYRE 80 (169) T ss_pred CCCcccCCCCCccccCCcccCCCCCCCCceecCCCCCCcCCHHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH Confidence 88888877653 23345577999999999999999999999999999999999999999999999999999 Q ss_pred HHHHhhHHHHHhcccccCCchhHHHHHHHHHHHHHHHHHHHHHhccccccccccchhhhhhHHHHHHHHHHHHHHHHHhC Q lcl|Aclame:pro 71 QQLAAGFTELGAVPGQWIDGRSRHVHRYLRAVHCTAAAWLMERYRSFDATAAGDRKAEAENTSVDDLRRDARWAVSDITG 150 (159) Q Consensus 71 ~~~~~G~~~L~~Vp~~~i~g~s~~v~~Y~rAVy~~AkA~L~e~y~~~d~t~~g~~~ae~~~~~~d~l~r~a~~AIrdi~G 150 (159) .|+++||++|++||+++|||+|+++++|+|||||+|||+|+|+|++||+|++|+++++++++++++|||+++||||+|+| T Consensus 81 ~~~a~G~~~La~vp~~~i~ges~~~~~Y~rAVy~~AkA~Lle~y~~~dtt~~g~~~ae~~~~~~d~l~rda~~AIr~i~G 160 (169) T protein:vir:60 81 QKIAAGFTRLADVPADDIDGESIKVFYYERAVCAMATASLYERYRGVDASAKGDKKPDSIDSTIDELWRDMRWAVARIQD 160 (169) T ss_pred HHHHhhhhhHHhccccccCChhHHHHHHHHHHHHHHHHHHhHhhcCCCcchhHhhhhhhchhhHHHHHHHHHHHHHHhhC Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred CCCceeeeC Q lcl|Aclame:pro 151 AARTTVELI 159 (159) Q Consensus 151 ~~r~~veLI 159 (159) ++|++|||| T Consensus 161 ~~r~tveLI 169 (169) T protein:vir:60 161 KPRCIVSQI 169 (169) T ss_pred CCCceeeeC Confidence 999999999 No 7 >protein:vir:5696 Length: 169 # NCBI annotation: gpL # Family: family:all:204 # MgeID: mge:120 # MgeName: L-413C # Cross-refs: genbank:acc:NP_839855;genbank:gi:30065710;genbank:GeneID:1260604 Probab=100.00 E-value=2.3e-70 Score=402.41 Aligned_cols=159 Identities=42% Similarity=0.608 Sum_probs=151.1 Q ss_pred CCCCcCCCCCC----------CCCCCCCceecCCCcCCcCCHHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 1 MSSFIAAAPVP----------TPAQPGGQPIGNDGFFPDIDVDQACAAMRLDGTVTPERLRAALVDAALSVNDELAAWKA 70 (159) Q Consensus 1 Ms~f~~~~~~~----------~~~~~~~~~I~ndgFwPdI~~~~~r~~~Ri~~~vt~~rl~~al~~A~~~VN~eL~~w~~ 70 (159) |.+|+++.+++ +.+++.+.+|+||||||||++++||+.||||++||++||+++|+.||++||.+|..||+ T Consensus 1 ~~~~~a~~~~~~~s~~~~~~~p~~~~~~~~I~ndgFwPdI~l~efr~~~Ri~~~vt~~rl~~al~~Ai~~VN~eL~~~~~ 80 (169) T protein:vir:56 1 MMTLIIPRKEAPVSGEGTVVIPQPAGDEPVIKNTFFFPDIDPKRVRERMRLEQTVAPARLREAIKSGMAETNAELYEYRE 80 (169) T ss_pred CCCcccCCCCCcccccCCccCCCCCCCCceecCCCCCCcCCHHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH Confidence 77777766643 22345677999999999999999999999999999999999999999999999999999 Q ss_pred HHHHhhHHHHHhcccccCCchhHHHHHHHHHHHHHHHHHHHHHhccccccccccchhhhhhHHHHHHHHHHHHHHHHHhC Q lcl|Aclame:pro 71 QQLAAGFTELGAVPGQWIDGRSRHVHRYLRAVHCTAAAWLMERYRSFDATAAGDRKAEAENTSVDDLRRDARWAVSDITG 150 (159) Q Consensus 71 ~~~~~G~~~L~~Vp~~~i~g~s~~v~~Y~rAVy~~AkA~L~e~y~~~d~t~~g~~~ae~~~~~~d~l~r~a~~AIrdi~G 150 (159) .|+++||++|++||+++|||+|+++++|+|||||+|||+|+|+|++||+|++|+++++++++++++|||+++||||+|+| T Consensus 81 ~~~a~G~~~La~vp~~~i~ges~~~~~Y~rAVy~~AkA~Lle~y~~~dtt~~g~~~ae~~~~~~d~l~rda~~AIr~i~G 160 (169) T protein:vir:56 81 QKIAAGFTCLADVPADDIDGESIKVFYYERAVCAMATASLYERYRGVDASAKGDKKADSIDSTIDELWRDMRWAVARIQD 160 (169) T ss_pred HHHHhhhhhHHhcchhhcCChhHHHHHHHHHHHHHHHHHHhHhhcCCCccHHHhhhhhhchhhHHHHHHHHHHHHHHhhC Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred CCCceeeeC Q lcl|Aclame:pro 151 AARTTVELI 159 (159) Q Consensus 151 ~~r~~veLI 159 (159) ++|++|||| T Consensus 161 ~~r~tveLI 169 (169) T protein:vir:56 161 KPRCIVSQI 169 (169) T ss_pred CCCceeeeC Confidence 999999999 No 8 >protein:vir:1155 Length: 153 # NCBI annotation: predicted capsid completion protein # Family: family:all:204 # MgeID: mge:24 # MgeName: phi CTX # Cross-refs: genbank:acc:NP_490604;genbank:gi:17313224;genbank:GeneID:927321 Probab=100.00 E-value=1.9e-70 Score=402.77 Aligned_cols=153 Identities=46% Similarity=0.782 Sum_probs=149.1 Q ss_pred CCCCcCCCCCCCCCCCCCceecCCCcCCcCCHHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHH Q lcl|Aclame:pro 1 MSSFIAAAPVPTPAQPGGQPIGNDGFFPDIDVDQACAAMRLDGTVTPERLRAALVDAALSVNDELAAWKAQQLAAGFTEL 80 (159) Q Consensus 1 Ms~f~~~~~~~~~~~~~~~~I~ndgFwPdI~~~~~r~~~Ri~~~vt~~rl~~al~~A~~~VN~eL~~w~~~~~~~G~~~L 80 (159) ||+|+++.|++ +.+|+||||||||++++||+.||||++||++||+++|+.||++||.+|..||+.|+++||++| T Consensus 1 Ms~~~~~~~~~------~~~I~n~gFwPdi~l~~fr~~~ri~~~vt~~rl~~al~~Ai~~VN~eL~~~~~~~~a~G~~~l 74 (153) T protein:vir:11 1 MSGFIANGPVP------AGHINSDPFWPTIELEHVRANLRIDSSVDPARLEVAVIAAVISVNRELRAWRLEKIAAGYAEL 74 (153) T ss_pred CCCCCCCCCCC------cceecCCCCCCcCCHHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhH Confidence 99998876543 468999999999999999999999999999999999999999999999999999999999999 Q ss_pred HhcccccCCchhHHHHHHHHHHHHHHHHHHHHHhccccccccccchhhhhhHHHHHHHHHHHHHHHHHhCCCCceeeeC Q lcl|Aclame:pro 81 GAVPGQWIDGRSRHVHRYLRAVHCTAAAWLMERYRSFDATAAGDRKAEAENTSVDDLRRDARWAVSDITGAARTTVELI 159 (159) Q Consensus 81 ~~Vp~~~i~g~s~~v~~Y~rAVy~~AkA~L~e~y~~~d~t~~g~~~ae~~~~~~d~l~r~a~~AIrdi~G~~r~~veLI 159 (159) ++||+++|||+|+++++|+|||||+|||+|+|+|++||+|++|+++++++++++++|||+++||||+|+|++|++|||| T Consensus 75 ~~vp~~~i~ges~~~~~Y~rAVy~~AkA~Lle~y~~~d~t~~g~~~ae~~~~~~~~l~rda~~AIr~i~G~~r~tveLI 153 (153) T protein:vir:11 75 AQVPSDKVRDTSELVQLYLRAVQSATAAEVAERYRWYDTTTSGNDKAQDIATTIDDYRRDQRWAIRDFLKRPRTTVELI 153 (153) T ss_pred HhccccccCchHHHHHHHHHHHHHHHHHHHhhhhcCCCccHHHhhhhhhchhhHHHHHHHHHHHHHHhhCCCCceeeeC Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999999999 No 9 >protein:vir:2018 Length: 169 # NCBI annotation: gpL # Family: family:all:204 # MgeID: mge:315 # MgeName: P2 # Cross-refs: genbank:acc:NP_046762;genbank:gi:9630333;genbank:GeneID:1261510 Probab=100.00 E-value=3.4e-70 Score=401.44 Aligned_cols=159 Identities=43% Similarity=0.629 Sum_probs=151.4 Q ss_pred CCCCcCCCCCC----------CCCCCCCceecCCCcCCcCCHHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 1 MSSFIAAAPVP----------TPAQPGGQPIGNDGFFPDIDVDQACAAMRLDGTVTPERLRAALVDAALSVNDELAAWKA 70 (159) Q Consensus 1 Ms~f~~~~~~~----------~~~~~~~~~I~ndgFwPdI~~~~~r~~~Ri~~~vt~~rl~~al~~A~~~VN~eL~~w~~ 70 (159) |.+|+++.|+. +++++.+.+|+||||||||++++||+.||||++||++||+++|+.||++||.+|..||+ T Consensus 1 ~~~~v~~~~~~~~s~~~~~~~p~~~~~~~~I~ndgFwPdI~l~~fr~~~Ri~~~vt~~rl~~al~~Ai~~VN~eL~~~~~ 80 (169) T protein:vir:20 1 MMTLIIPRKEAPVSGEGTVVIPQPAGDEPVIKNTFFFPDIDPKRVRERMRLEQTVAPARLREAIKSGMAETNAELYEYRE 80 (169) T ss_pred CCCcccCCCCCccccCCccccCCCCCCCceecCCCCCCcCCHHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH Confidence 77777766642 23345678999999999999999999999999999999999999999999999999999 Q ss_pred HHHHhhHHHHHhcccccCCchhHHHHHHHHHHHHHHHHHHHHHhccccccccccchhhhhhHHHHHHHHHHHHHHHHHhC Q lcl|Aclame:pro 71 QQLAAGFTELGAVPGQWIDGRSRHVHRYLRAVHCTAAAWLMERYRSFDATAAGDRKAEAENTSVDDLRRDARWAVSDITG 150 (159) Q Consensus 71 ~~~~~G~~~L~~Vp~~~i~g~s~~v~~Y~rAVy~~AkA~L~e~y~~~d~t~~g~~~ae~~~~~~d~l~r~a~~AIrdi~G 150 (159) .|+++||++|++||+++|||+|+++++|+|||||+|||+|+|+|++||+|++|+++++++++++++|||+++||||+|+| T Consensus 81 ~~~a~G~~tLa~vp~~~i~ges~~~~~Y~rAVy~~AkA~Lle~y~~~dtt~~g~~~ae~~~~~~d~l~rda~~AIr~i~G 160 (169) T protein:vir:20 81 QKIAAGFTRLADVPADDIDGESIKVFYYERAVCAMATASLYERYRGVDASAKGDKKADSIDSTIDELWRDMRWAVARIQG 160 (169) T ss_pred HHHHhhhhhHHhcchhhcCChhHHHHHHHHHHHHHHHHHHhHhhcCCCcchhhhhhhhcchhhHHHHHHHHHHHHHHHhC Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred CCCceeeeC Q lcl|Aclame:pro 151 AARTTVELI 159 (159) Q Consensus 151 ~~r~~veLI 159 (159) ++|++|||| T Consensus 161 ~~r~tveLI 169 (169) T protein:vir:20 161 KPRCIVSQI 169 (169) T ss_pred CCCceeeeC Confidence 999999999 No 10 >protein:vir:272 Length: 153 # NCBI annotation: putative head completion protein # Family: family:all:204 # MgeID: mge:7 # MgeName: K139 # Cross-refs: genbank:acc:NP_536652;genbank:gi:17975130;genbank:GeneID:929086 Probab=100.00 E-value=5e-68 Score=389.54 Aligned_cols=152 Identities=28% Similarity=0.404 Sum_probs=146.8 Q ss_pred CCcCCCCCCCCCCCCCceecCCCcCCcCCHHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHh Q lcl|Aclame:pro 3 SFIAAAPVPTPAQPGGQPIGNDGFFPDIDVDQACAAMRLDGTVTPERLRAALVDAALSVNDELAAWKAQQLAAGFTELGA 82 (159) Q Consensus 3 ~f~~~~~~~~~~~~~~~~I~ndgFwPdI~~~~~r~~~Ri~~~vt~~rl~~al~~A~~~VN~eL~~w~~~~~~~G~~~L~~ 82 (159) +|+++.+ ++++.+|+||||||||++++||+.||||++||++||+++|+.||++||.+|..||+.|+++||++|++ T Consensus 1 mF~g~~~-----~~~~~~I~n~gFwPdi~l~~fr~~~ri~~~vt~~rl~~al~~Ai~~VN~eL~~~~~~~~~~G~~~lad 75 (153) T protein:vir:27 1 MFTASNT-----SFQDTTIENDGFWPNINAGDFERLRGTPAAQDDERIAHAVVNAIASVNLQLSDLKAKYIAAGHASAAD 75 (153) T ss_pred CCCCCCC-----CcccccccCCCCCCcCCHHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHh Confidence 8877543 34567999999999999999999999999999999999999999999999999999999999999999 Q ss_pred ccc-ccCCchhHHHHHHHHHHHHHHHHHHHHHhccccccccccchhhhhhHHHHHHHHHHHHHHHHHhCCCCceeeeC Q lcl|Aclame:pro 83 VPG-QWIDGRSRHVHRYLRAVHCTAAAWLMERYRSFDATAAGDRKAEAENTSVDDLRRDARWAVSDITGAARTTVELI 159 (159) Q Consensus 83 Vp~-~~i~g~s~~v~~Y~rAVy~~AkA~L~e~y~~~d~t~~g~~~ae~~~~~~d~l~r~a~~AIrdi~G~~r~~veLI 159 (159) ||+ ++|||+|+++++|+|||||+|||+|+|+|++||+|++|+++++++++++++|||+++||||+|+|++|++|||| T Consensus 76 vpa~~~inges~~~~~Y~rAVy~~AkA~Lle~y~~~d~t~~g~~~ae~~~~~~~~l~rda~~AIr~i~G~~r~tveLI 153 (153) T protein:vir:27 76 VPAFPKVNDKNLIVIQYQSAVFARAKADLLPDFATVSQKKEGDHLAERSQETKNELLAESERIIRNMLGKNRASVELI 153 (153) T ss_pred cCCccccCchHHHHHHHHHHHHHHHHHHHhHhhcCCCCchHHHHHhhhhhHHHHHHHHHHHHHHHHhhCCCCceeeeC Confidence 999 79999999999999999999999999999999999999999999999999999999999999999999999999 No 11 >protein:vir:78780 Length: 153 # NCBI annotation: putative head completion protein # Family: family:all:204 # MgeID: mge:1857 # MgeName: phiO18P # Cross-refs: genbank:acc:YP_001285649;genbank:gi:148727155;genbank:GeneID:5220129 Probab=100.00 E-value=4.7e-68 Score=389.68 Aligned_cols=152 Identities=28% Similarity=0.400 Sum_probs=147.2 Q ss_pred CCcCCCCCCCCCCCCCceecCCCcCCcCCHHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHh Q lcl|Aclame:pro 3 SFIAAAPVPTPAQPGGQPIGNDGFFPDIDVDQACAAMRLDGTVTPERLRAALVDAALSVNDELAAWKAQQLAAGFTELGA 82 (159) Q Consensus 3 ~f~~~~~~~~~~~~~~~~I~ndgFwPdI~~~~~r~~~Ri~~~vt~~rl~~al~~A~~~VN~eL~~w~~~~~~~G~~~L~~ 82 (159) +|+++. .++++.+|+||||||||++++||+.||||++||++||+++|+.||++||.+|..||+.|+++||++|++ T Consensus 1 mF~g~~-----~~~~~~~I~ndgFwPdi~l~~fr~~~ri~~~vt~~rl~~al~~Ai~~VN~eL~~~~~~~~~~G~~~la~ 75 (153) T protein:vir:78 1 MFAGKD-----IDYSAATIRNDGFWPDVAVADFERRRALPADLDQQTTGAALLAAVSEINLQLASHQAALQAKGYASAAA 75 (153) T ss_pred CCCCCC-----CCccceeecCCCCCCcCCHHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchhh Confidence 887753 345678999999999999999999999999999999999999999999999999999999999999999 Q ss_pred cccccC-CchhHHHHHHHHHHHHHHHHHHHHHhccccccccccchhhhhhHHHHHHHHHHHHHHHHHhCCCCceeeeC Q lcl|Aclame:pro 83 VPGQWI-DGRSRHVHRYLRAVHCTAAAWLMERYRSFDATAAGDRKAEAENTSVDDLRRDARWAVSDITGAARTTVELI 159 (159) Q Consensus 83 Vp~~~i-~g~s~~v~~Y~rAVy~~AkA~L~e~y~~~d~t~~g~~~ae~~~~~~d~l~r~a~~AIrdi~G~~r~~veLI 159 (159) ||+++| ||+|+++++|+|||||+|||+|+|+|++||+|++|+++++++++++++|||+++||||+|+|++|++|||| T Consensus 76 vp~~~i~~g~s~~v~~Y~rAVy~~AkA~Lle~y~~~d~t~~g~~~ae~~~~~~~~l~rda~~AIr~i~G~~r~tveLI 153 (153) T protein:vir:78 76 VPGPSLEDGTNALTEQYLAAVFARAKAALLPEFASVTERATANNQVERSPDQRNQLLAESQQLVRSIKGKRRAGVSQI 153 (153) T ss_pred ccccccCCchhHHHHHHHHHHHHHHHHHHhHhhcCCCcchHHHHHhhhhhHHHHHHHHHHHHHHHHHhCCCCceeeeC Confidence 999999 89999999999999999999999999999999999999999999999999999999999999999999999 No 12 >protein:vir:3748 Length: 150 # NCBI annotation: orf15 # Family: family:all:204 # MgeID: mge:79 # MgeName: HP1 # Cross-refs: genbank:acc:NP_043489;genbank:gi:9628624;genbank:GeneID:1261139 Probab=100.00 E-value=1.1e-66 Score=382.28 Aligned_cols=150 Identities=21% Similarity=0.262 Sum_probs=143.9 Q ss_pred CCcCCCCCCCCCCCCCceecCCCcCCcCCHHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHh Q lcl|Aclame:pro 3 SFIAAAPVPTPAQPGGQPIGNDGFFPDIDVDQACAAMRLDGTVTPERLRAALVDAALSVNDELAAWKAQQLAAGFTELGA 82 (159) Q Consensus 3 ~f~~~~~~~~~~~~~~~~I~ndgFwPdI~~~~~r~~~Ri~~~vt~~rl~~al~~A~~~VN~eL~~w~~~~~~~G~~~L~~ 82 (159) +|+++. .++++.+|+||||||||++++||+.||||++||++||+++|+.||++||.+|+.||+.|+++||++|++ T Consensus 1 mF~G~~-----~~~~~~~I~n~gFwPdi~l~~fr~~~Ri~~~vt~~rl~~al~~Ai~~VN~eL~~~~~~~~~~G~~~l~~ 75 (150) T protein:vir:37 1 MFNGRT-----QDYDDTVITNNGFWSDIYVEEFQKQRAIPLQIPVEMVKAALVAAIQGVDLDLADVAESYRKSAVNSVTE 75 (150) T ss_pred CCCCCC-----CCcccccccCCCCCCcCCHHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHh Confidence 887753 345678999999999999999999999999999999999999999999999999999999999999999 Q ss_pred cccccCCchhHHHHHHHHHHHHHHHHHHHHHhccccccccccchhhhhhHHHHHHHHHHHHHHHHHhCCCCceeeeC Q lcl|Aclame:pro 83 VPGQWIDGRSRHVHRYLRAVHCTAAAWLMERYRSFDATAAGDRKAEAENTSVDDLRRDARWAVSDITGAARTTVELI 159 (159) Q Consensus 83 Vp~~~i~g~s~~v~~Y~rAVy~~AkA~L~e~y~~~d~t~~g~~~ae~~~~~~d~l~r~a~~AIrdi~G~~r~~veLI 159 (159) ||+++|||+|+++++|+|||||+|||+|+|+|+++|+|++|++ +++++++++|||+++||||+|+|++|++|||| T Consensus 76 vp~~~i~ges~~~~~Y~rAVy~~AkA~Lle~y~~~d~t~~g~~--~~~~~~~~~l~rda~~AIr~i~G~~r~tveLI 150 (150) T protein:vir:37 76 ISSPLINDENYAETLYKKAVFARAKAELLPEFNTLSGREIHQN--RDYVTEQKSLLAEATHAIRTLKGKKRGSVWLL 150 (150) T ss_pred ccccccCCchHHHHHHHHHHHHHHHHHHhHhhcCcccchhhhh--hcchHHHHHHHHHHHHHHHHHhCCCCceeeeC Confidence 9999999999999999999999999999999999999999976 47999999999999999999999999999999 No 13 >protein:vir:3785 Length: 150 # NCBI annotation: packaging protein # Family: family:all:204 # MgeID: mge:328 # MgeName: HP2 # Cross-refs: genbank:acc:NP_536825;genbank:gi:17981834;genbank:GeneID:929213 Probab=100.00 E-value=1.5e-66 Score=381.51 Aligned_cols=150 Identities=21% Similarity=0.289 Sum_probs=142.7 Q ss_pred CCcCCCCCCCCCCCCCceecCCCcCCcCCHHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHh Q lcl|Aclame:pro 3 SFIAAAPVPTPAQPGGQPIGNDGFFPDIDVDQACAAMRLDGTVTPERLRAALVDAALSVNDELAAWKAQQLAAGFTELGA 82 (159) Q Consensus 3 ~f~~~~~~~~~~~~~~~~I~ndgFwPdI~~~~~r~~~Ri~~~vt~~rl~~al~~A~~~VN~eL~~w~~~~~~~G~~~L~~ 82 (159) +|+++. .++++.+|+||||||||++++||+.||||++||++||+++|+.||++||.+|+.||+.|+++||++|++ T Consensus 1 mF~g~~-----~~~~~~~I~ndgFwPdI~l~~fr~~~Ri~~~vt~~rl~~al~~Ai~~VN~eL~~~~~~~~~~G~~sl~~ 75 (150) T protein:vir:37 1 MFNGRT-----QDYDDTVITNNGFWSDIYVEEFQKQRAIPLQIPVEMVKTALIAAMQGVNLDLAEVEENHRKSAVNSVQE 75 (150) T ss_pred CCCCCC-----CCcccceecCCCcCCcCCHHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHh Confidence 887753 345578999999999999999999999999999999999999999999999999999999999999999 Q ss_pred cccccCCchhHHHHHHHHHHHHHHHHHHHHHhccccccccccchhhhhhHHHHHHHHHHHHHHHHHhCCCCceeeeC Q lcl|Aclame:pro 83 VPGQWIDGRSRHVHRYLRAVHCTAAAWLMERYRSFDATAAGDRKAEAENTSVDDLRRDARWAVSDITGAARTTVELI 159 (159) Q Consensus 83 Vp~~~i~g~s~~v~~Y~rAVy~~AkA~L~e~y~~~d~t~~g~~~ae~~~~~~d~l~r~a~~AIrdi~G~~r~~veLI 159 (159) ||+++|||+|+++++|+|||||+|||+|+|+|++||+|++|+++++ ++++++|||+++||||+|+|++|++|||| T Consensus 76 vp~~~i~g~s~~~~~Y~rAVy~~AkA~Lle~y~~~d~t~~g~~~~~--~~~~~~l~rda~~AIr~i~G~~r~tveLI 150 (150) T protein:vir:37 76 ISTQRINGENYAETLYKKAVFARAKAELLPEFNTLSGREIHQNRDY--VVEQKSLLAEATHAIRTLKGKKRGSVWLL 150 (150) T ss_pred ccccccCChhHHHHHHHHHHHHHHHHHHhHhhcCccccchhccccc--hhhHHHHHHHHHHHHHHHhCCCCceeeeC Confidence 9999999999999999999999999999999999999999999864 56679999999999999999999999999 No 14 >protein:vir:98858 Length: 150 # NCBI annotation: hypothetical protein # Family: family:all:204 # MgeID: mge:1495 # MgeName: F108 # Cross-refs: genbank:acc:YP_654734;genbank:gi:109302919;genbank:GeneID:4156063 Probab=100.00 E-value=1.4e-66 Score=381.69 Aligned_cols=150 Identities=19% Similarity=0.254 Sum_probs=143.9 Q ss_pred CCcCCCCCCCCCCCCCceecCCCcCCcCCHHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHh Q lcl|Aclame:pro 3 SFIAAAPVPTPAQPGGQPIGNDGFFPDIDVDQACAAMRLDGTVTPERLRAALVDAALSVNDELAAWKAQQLAAGFTELGA 82 (159) Q Consensus 3 ~f~~~~~~~~~~~~~~~~I~ndgFwPdI~~~~~r~~~Ri~~~vt~~rl~~al~~A~~~VN~eL~~w~~~~~~~G~~~L~~ 82 (159) +|+++. .++.+.+|+||||||||++++||+.||||++||++||+++|+.||++||.+|+.||+.|+++||++|++ T Consensus 1 mFsG~~-----~~~~~~~I~n~gFwPdi~l~~fr~~~Ri~~~vt~~rl~~al~~Ai~~VN~eL~~~~~~~~a~G~~~l~~ 75 (150) T protein:vir:98 1 MFNGRN-----QQLESAVILNSGFWAHINIAEFQKERNIPLQMPVETVKSALITAMQELELDLKDVEQRYKARGINNVQE 75 (150) T ss_pred CCCCCC-----CCcccceecCCCCCCcCCHHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccChhh Confidence 887753 345678999999999999999999999999999999999999999999999999999999999999999 Q ss_pred cccccCCchhHHHHHHHHHHHHHHHHHHHHHhccccccccccchhhhhhHHHHHHHHHHHHHHHHHhCCCCceeeeC Q lcl|Aclame:pro 83 VPGQWIDGRSRHVHRYLRAVHCTAAAWLMERYRSFDATAAGDRKAEAENTSVDDLRRDARWAVSDITGAARTTVELI 159 (159) Q Consensus 83 Vp~~~i~g~s~~v~~Y~rAVy~~AkA~L~e~y~~~d~t~~g~~~ae~~~~~~d~l~r~a~~AIrdi~G~~r~~veLI 159 (159) ||+++|||+|+++++|+|||||+|||+|+|+|+++|+|++|+++ ++++++++|||+++||||+|+|++|++|||| T Consensus 76 vp~~~i~g~s~~~~~Y~rAVy~~AkA~Lle~y~~~d~t~~g~~~--~~~~~~~~l~rda~~AIr~i~G~~r~tveLI 150 (150) T protein:vir:98 76 IAKSTVNNENPAQTLYKKAVFARAKADLLPEFFALSAREIHQNR--DYVEEQKSLLAEATRAIRTLKGKKRGSVHLL 150 (150) T ss_pred ccccccCChhHHHHHHHHHHHHHHHHHHhHhhcCCCcchhhhhc--cChHHHHHHHHHHHHHHHHHhCCCCceeeeC Confidence 99999999999999999999999999999999999999999875 6899999999999999999999999999999 Done!