Query lcl|Aclame:protein:vir:99924|NCBI_annot:gp11|genbank:acc:YP_655528;genbank:gi:109392298;genbank:GeneID:4157093 Match_columns 87 No_of_seqs 6 out of 9 Neff 2.2 Searched_HMMs 1612 Date Mon Dec 2 09:24:47 2013 Command /home/guerois/workspace/virfam/python/lib/hhsearch//hhsearch2 -i .//seq/seq_11 -d /home/guerois/workspace/virfam/python/profile_database/capsid_neck_tail.hhm -glob -cpu 7 -o .//seq/HHR/seq_11_vs_rec_db.hhr No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM 1 protein:vir:99924 Length: 87 # 100.0 1.8E-51 1.1E-54 298.8 7.3 87 1-87 1-87 (87) 2 protein:vir:2507 Length: 83 # 100.0 5.4E-43 3.4E-46 252.3 6.7 82 6-87 1-82 (83) 3 protein:vir:94763 Length: 78 # 98.3 9.9E-10 6.1E-13 69.9 3.4 76 1-84 1-78 (78) 4 protein:vir:1642 Length: 78 # 98.3 9.9E-10 6.1E-13 69.9 3.4 76 1-84 1-78 (78) 5 protein:vir:9578 Length: 78 # 98.2 2.3E-09 1.4E-12 67.9 3.6 76 1-84 1-78 (78) 6 protein:vir:9763 Length: 89 # 98.1 4.6E-09 2.9E-12 66.3 3.1 76 1-84 12-89 (89) 7 protein:vir:106570 Length: 182 72.9 0.059 3.6E-05 27.3 5.3 87 1-87 1-111 (182) 8 protein:vir:98468 Length: 90 # 51.3 0.16 0.0001 24.9 3.5 77 1-87 1-84 (90) 9 protein:vir:104091 Length: 111 44.6 0.26 0.00016 23.8 3.6 84 1-87 1-93 (111) 10 protein:vir:7776 Length: 119 # 41.1 0.39 0.00024 22.8 4.0 85 1-87 1-103 (119) 11 protein:vir:78163 Length: 92 # 25.6 1.7 0.0011 19.3 4.8 86 1-87 1-92 (92) 12 protein:vir:78298 Length: 131 25.4 1.5 0.00096 19.5 4.5 86 1-87 1-101 (131) 13 protein:vir:78503 Length: 131 25.4 1.5 0.00096 19.5 4.5 86 1-87 1-101 (131) 14 protein:vir:2347 Length: 131 # 25.4 1.5 0.00096 19.5 4.5 86 1-87 1-101 (131) 15 protein:vir:94654 Length: 142 20.8 2.1 0.0013 18.8 4.3 87 1-87 1-132 (142) 16 protein:vir:98409 Length: 108 20.3 2.2 0.0014 18.7 4.3 80 1-87 10-97 (108) No 1 >protein:vir:99924 Length: 87 # NCBI annotation: gp11 # Family: family:all:1171 # MgeID: mge:1611 # MgeName: Halo # Cross-refs: genbank:acc:YP_655528;genbank:gi:109392298;genbank:GeneID:4157093 Probab=100.00 E-value=1.8e-51 Score=298.81 Aligned_cols=87 Identities=100% Similarity=1.346 Sum_probs=87.0 Q ss_pred CccccCCcchhhhhccChhHHHHHHHHHHHHHhhhccccCCCCCcccceeecCceeEEEEeccCCCceeeecccCChhhh Q lcl|Aclame:pro 1 MGKLKIPISDDKKIRRSSEVRKACQTIGATIAVTAGRIAGDSDGYGVEETVGSDRTRVNVYAQHNKTMKAEAGATPPLQQ 80 (87) Q Consensus 1 mgkLd~P~seh~kIR~speV~~a~~~la~~~a~~Ag~iAG~pdgY~te~~vGsDR~Ra~V~~es~kairaE~k~aPlMqi 80 (87) |||||||||||+|||||||||++||+||.+||++||+|||+||||+||++|||||+|+||||+|++||++|++++||||| T Consensus 1 ~~~l~~P~SehrKIR~lpev~kacq~lga~ia~~Ag~iAga~DgYgte~~vGrdR~Rv~V~a~~~aaikaE~~~aPlmq~ 80 (87) T protein:vir:99 1 MGKLKIPISDDKKIRRSSEVRKACQTIGATIAVTAGRIAGDSDGYGVEETVGSDRTRVNVYAQHNKTMKAEAGATPPLQQ 80 (87) T ss_pred CCcccCCcccchhhccchhHHHHHHHhhhHHhhhhccccCCCCCceeeeeecCceeEEEEeecCCceeeeccCCCchhhh Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred hhhhhcC Q lcl|Aclame:pro 81 AAMRVRK 87 (87) Q Consensus 81 aA~~~~~ 87 (87) ||||||| T Consensus 81 aA~~~~~ 87 (87) T protein:vir:99 81 AAMRVRK 87 (87) T ss_pred hhhhhcC Confidence 9999999 No 2 >protein:vir:2507 Length: 83 # NCBI annotation: hypothetical protein # Family: family:all:1171 # MgeID: mge:53 # MgeName: TM4 # Cross-refs: genbank:acc:NP_569748;genbank:gi:18496898;genbank:GeneID:932258 Probab=100.00 E-value=5.4e-43 Score=252.29 Aligned_cols=82 Identities=35% Similarity=0.555 Sum_probs=79.7 Q ss_pred CCcchhhhhccChhHHHHHHHHHHHHHhhhccccCCCCCcccceeecCceeEEEEeccCCCceeeecccCChhhhhhhhh Q lcl|Aclame:pro 6 IPISDDKKIRRSSEVRKACQTIGATIAVTAGRIAGDSDGYGVEETVGSDRTRVNVYAQHNKTMKAEAGATPPLQQAAMRV 85 (87) Q Consensus 6 ~P~seh~kIR~speV~~a~~~la~~~a~~Ag~iAG~pdgY~te~~vGsDR~Ra~V~~es~kairaE~k~aPlMqiaA~~~ 85 (87) ||||||||||||||||++||+||.+||++||+|||+||||+||++|||||+||||||+|++||++|++++|||||||-.= T Consensus 1 ~P~SehrKIR~lpev~kacq~lga~ia~~Ag~iA~a~DgYgte~~vGrdR~Rv~V~a~~~aaikaE~~~aPlmq~aAe~g 80 (83) T protein:vir:25 1 MPNSEHRKIRKLPEVQAELQRLAAEVARRAGGIADAPDGYGTDLEVGRTRARAHVWPKSSAAIKAEIKTAPLMTIAAEQG 80 (83) T ss_pred CCCcccchhccchhHHHHHHHhhHHHhhhhccccCCCCCcccceeecCceeeEEEeecCCceeeecccCCcchhhhhhcC Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999765 Q ss_pred cC Q lcl|Aclame:pro 86 RK 87 (87) Q Consensus 86 ~~ 87 (87) -. T Consensus 81 p~ 82 (83) T protein:vir:25 81 PQ 82 (83) T ss_pred CC Confidence 44 No 3 >protein:vir:94763 Length: 78 # NCBI annotation: unknown # Family: family:all:1171 # MgeID: mge:1529 # MgeName: phi LC3 # Cross-refs: genbank:acc:NP_996710;genbank:gi:45597425;genbank:GeneID:2769032 Probab=98.28 E-value=9.9e-10 Score=69.95 Aligned_cols=76 Identities=21% Similarity=0.347 Sum_probs=66.5 Q ss_pred CccccCCc--chhhhhccChhHHHHHHHHHHHHHhhhccccCCCCCcccceeecCceeEEEEeccCCCceeeecccCChh Q lcl|Aclame:pro 1 MGKLKIPI--SDDKKIRRSSEVRKACQTIGATIAVTAGRIAGDSDGYGVEETVGSDRTRVNVYAQHNKTMKAEAGATPPL 78 (87) Q Consensus 1 mgkLd~P~--seh~kIR~speV~~a~~~la~~~a~~Ag~iAG~pdgY~te~~vGsDR~Ra~V~~es~kairaE~k~aPlM 78 (87) |.+..|-. .--+.|++|||+|+.|.+.|+.|+.+| ++||..|+-+|.+|+++.|+|++.+|++-+.|.--|+ T Consensus 1 Ms~~kfklN~aGv~~llks~~iQa~l~~~a~~i~~ra------G~gy~~dv~vgk~Ra~a~V~~~t~~A~~~N~KhNTLL 74 (78) T protein:vir:94 1 MAKNLFKLNRSGVASMMKSPEMQAILKEKASAVKQRC------GPGYGQDMHVGKNRANAMVFAETYQAKRDNMKNNTIL 74 (78) T ss_pred CCcceeEeCHHHHHHHhcCchhHHHHHHHHHHHHHhh------cCcceeccccCCcccceEeccCChhhHHhhhhcchhh Confidence 88755543 456889999999999999999999888 5789999999999999999999999999999998887 Q ss_pred hhhhhh Q lcl|Aclame:pro 79 QQAAMR 84 (87) Q Consensus 79 qiaA~~ 84 (87) - |+| T Consensus 75 K--Av~ 78 (78) T protein:vir:94 75 K--AVR 78 (78) T ss_pred h--hcC Confidence 5 444 No 4 >protein:vir:1642 Length: 78 # NCBI annotation: hypothetical protein # Family: family:all:1171 # MgeID: mge:33 # MgeName: r1t # Cross-refs: genbank:acc:NP_695063;genbank:gi:23455754;genbank:GeneID:955475 Probab=98.28 E-value=9.9e-10 Score=69.95 Aligned_cols=76 Identities=21% Similarity=0.347 Sum_probs=66.5 Q ss_pred CccccCCc--chhhhhccChhHHHHHHHHHHHHHhhhccccCCCCCcccceeecCceeEEEEeccCCCceeeecccCChh Q lcl|Aclame:pro 1 MGKLKIPI--SDDKKIRRSSEVRKACQTIGATIAVTAGRIAGDSDGYGVEETVGSDRTRVNVYAQHNKTMKAEAGATPPL 78 (87) Q Consensus 1 mgkLd~P~--seh~kIR~speV~~a~~~la~~~a~~Ag~iAG~pdgY~te~~vGsDR~Ra~V~~es~kairaE~k~aPlM 78 (87) |.+..|-. .--+.|++|||+|+.|.+.|+.|+.+| ++||..|+-+|.+|+++.|+|++.+|++-+.|.--|+ T Consensus 1 Ms~~kfklN~aGv~~llks~~iQa~l~~~a~~i~~ra------G~gy~~dv~vgk~Ra~a~V~~~t~~A~~~N~KhNTLL 74 (78) T protein:vir:16 1 MAKNLFKLNRSGVASMMKSPEMQAILKEKASAVKQRC------GPGYGQDMHVGKNRANAMVFAETYQAKRDNMKNNTIL 74 (78) T ss_pred CCcceeEeCHHHHHHHhcCchhHHHHHHHHHHHHHhh------cCcceeccccCCcccceEeccCChhhHHhhhhcchhh Confidence 88755543 456889999999999999999999888 5789999999999999999999999999999998887 Q ss_pred hhhhhh Q lcl|Aclame:pro 79 QQAAMR 84 (87) Q Consensus 79 qiaA~~ 84 (87) - |+| T Consensus 75 K--Av~ 78 (78) T protein:vir:16 75 K--AVR 78 (78) T ss_pred h--hcC Confidence 5 444 No 5 >protein:vir:9578 Length: 78 # NCBI annotation: gp44 # Family: family:all:1171 # MgeID: mge:171 # MgeName: SM1 # Cross-refs: genbank:acc:NP_862883;genbank:gi:32469475;genbank:GeneID:1461320 Probab=98.19 E-value=2.3e-09 Score=67.91 Aligned_cols=76 Identities=20% Similarity=0.296 Sum_probs=66.1 Q ss_pred CccccCC--cchhhhhccChhHHHHHHHHHHHHHhhhccccCCCCCcccceeecCceeEEEEeccCCCceeeecccCChh Q lcl|Aclame:pro 1 MGKLKIP--ISDDKKIRRSSEVRKACQTIGATIAVTAGRIAGDSDGYGVEETVGSDRTRVNVYAQHNKTMKAEAGATPPL 78 (87) Q Consensus 1 mgkLd~P--~seh~kIR~speV~~a~~~la~~~a~~Ag~iAG~pdgY~te~~vGsDR~Ra~V~~es~kairaE~k~aPlM 78 (87) |.+..|- -.--+.|++||++|+.|...|+.|+.+| ++||+.++-+|.+|+++.|+|++.+|++-+.|.--|+ T Consensus 1 ms~~k~klN~aGvr~ll~s~~~Qa~l~~~A~~i~~ra------g~gY~~d~~~gk~Ra~a~V~~~t~~A~~~N~khNTLL 74 (78) T protein:vir:95 1 MSNTKIKLIGAGVGALLKSKEIQDILNKEATVIKKRC------GPGYEQDSHVGKTRANAMIYPTTRKAKRDNLKNNTLL 74 (78) T ss_pred CCcceeeeCHHHHHHHhcChhHHHHHHHHHHHHHHhh------ccccccccccCCcccceEeecCChHHHHhhhhhhhhh Confidence 8876553 3446899999999999999999999888 4689999999999999999999999999999998887 Q ss_pred hhhhhh Q lcl|Aclame:pro 79 QQAAMR 84 (87) Q Consensus 79 qiaA~~ 84 (87) - |+| T Consensus 75 K--Av~ 78 (78) T protein:vir:95 75 K--AVH 78 (78) T ss_pred h--hcC Confidence 5 344 No 6 >protein:vir:9763 Length: 89 # NCBI annotation: hypothetical protein # Family: family:all:1171 # MgeID: mge:175 # MgeName: 315.3 # Cross-refs: genbank:acc:NP_795525;genbank:gi:28876279;genbank:GeneID:1257820 Probab=98.08 E-value=4.6e-09 Score=66.28 Aligned_cols=76 Identities=28% Similarity=0.370 Sum_probs=65.7 Q ss_pred CccccCC--cchhhhhccChhHHHHHHHHHHHHHhhhccccCCCCCcccceeecCceeEEEEeccCCCceeeecccCChh Q lcl|Aclame:pro 1 MGKLKIP--ISDDKKIRRSSEVRKACQTIGATIAVTAGRIAGDSDGYGVEETVGSDRTRVNVYAQHNKTMKAEAGATPPL 78 (87) Q Consensus 1 mgkLd~P--~seh~kIR~speV~~a~~~la~~~a~~Ag~iAG~pdgY~te~~vGsDR~Ra~V~~es~kairaE~k~aPlM 78 (87) |.+..|- -.--+.|++||++|++|..-|+.|+.+| ++||+.++-+|.+|+++.|+|++.+|++-+.|.--|+ T Consensus 12 MskvkfklN~aGvr~llks~~iQa~l~~~A~~I~~rA------g~gY~adv~~Gk~Ra~a~V~t~t~~A~~~N~KHNTLL 85 (89) T protein:vir:97 12 MSKFKFKLNKAGVAELMKSSEMQQVLTTKATAIRERC------GDGYAQDIHVGKNRANAMVSAKTIKAKKDNSKNNTLL 85 (89) T ss_pred hhcceeeeCHHHHHHHhcChhHHHHHHHHHHHHHHhh------ccccccccccCCcccceEeccCChHHHHhhhhhhhhh Confidence 7765543 3456899999999999999999999888 4689999999999999999999999999999998887 Q ss_pred hhhhhh Q lcl|Aclame:pro 79 QQAAMR 84 (87) Q Consensus 79 qiaA~~ 84 (87) - |+| T Consensus 86 K--Av~ 89 (89) T protein:vir:97 86 K--AVR 89 (89) T ss_pred h--hcC Confidence 5 334 No 7 >protein:vir:106570 Length: 182 # NCBI annotation: putative protein # Family: family:all:6475 # MgeID: mge:1598 # MgeName: Lj965 # Cross-refs: genbank:acc:NP_958588;genbank:gi:41179258;genbank:GeneID:2717106 Probab=72.89 E-value=0.059 Score=27.33 Aligned_cols=87 Identities=15% Similarity=0.114 Sum_probs=56.0 Q ss_pred CccccCCcch--hhhhccChh-HHH----HH----HHHHHHHHhhhccccCCCCC-----cccceeecCceeEEEEeccC Q lcl|Aclame:pro 1 MGKLKIPISD--DKKIRRSSE-VRK----AC----QTIGATIAVTAGRIAGDSDG-----YGVEETVGSDRTRVNVYAQH 64 (87) Q Consensus 1 mgkLd~P~se--h~kIR~spe-V~~----a~----~~la~~~a~~Ag~iAG~pdg-----Y~te~~vGsDR~Ra~V~~es 64 (87) |-+++|=--+ .+|+++.|+ +++ ++ +++++.+..+|-+.+---.| ..+++++..+.+...||+.. T Consensus 1 m~~v~i~Gld~L~~kl~~~~~~~~~~v~~a~~~~~~~~a~~v~~~ak~~~PvdtG~Lr~SI~~~~~~~~~~~~g~V~~~~ 80 (182) T protein:vir:10 1 MIEVELKGVNELRAKLKKLPDIMAKATANAQENAIEQAEAYAVDELQSSIKYSTGELTRSFKHEVKVDGDEVIGRWWNSS 80 (182) T ss_pred CeEEEEecHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCchhhhhceeeeeeecCCeEEEEeecCC Confidence 8888886555 688888875 222 33 44444444444444322122 45678888889999999999 Q ss_pred CCceeeecccCChhhhhhhhh--------cC Q lcl|Aclame:pro 65 NKTMKAEAGATPPLQQAAMRV--------RK 87 (87) Q Consensus 65 ~kairaE~k~aPlMqiaA~~~--------~~ 87 (87) +-|+=.|.+|-|.++..-.-+ ++ T Consensus 81 ~ya~yvE~GTG~~~~~~~~~~~p~~~~~~~~ 111 (182) T protein:vir:10 81 MVAVFREFGTGLVGERSHKQLPKNVAIIYRQ 111 (182) T ss_pred CccceeecCcccccccCccccCccceeeeec Confidence 999999999988775433211 11 No 8 >protein:vir:98468 Length: 90 # NCBI annotation: ORF5 # Family: family:all:32435 # MgeID: mge:1589 # MgeName: VWB # Cross-refs: genbank:acc:NP_958283;genbank:gi:41057257;uniprot:Q38598;genbank:GeneID:2732852 Probab=51.28 E-value=0.16 Score=24.92 Aligned_cols=77 Identities=25% Similarity=0.291 Sum_probs=47.7 Q ss_pred CccccCCcchhh----hhccChhHHHHHHHHHHHHHhhhccccCCC--CCcccceeecCceeEEEEeccCCCceeeeccc Q lcl|Aclame:pro 1 MGKLKIPISDDK----KIRRSSEVRKACQTIGATIAVTAGRIAGDS--DGYGVEETVGSDRTRVNVYAQHNKTMKAEAGA 74 (87) Q Consensus 1 mgkLd~P~seh~----kIR~speV~~a~~~la~~~a~~Ag~iAG~p--dgY~te~~vGsDR~Ra~V~~es~kairaE~k~ 74 (87) |.+-.|-.+-.+ ..-+||+++..++.--..+- .|.+.|-.| +-|-||++-|+.|+|--|--.- . T Consensus 1 mar~~fr~~~nRRniA~FLrsp~tr~~iE~kTRa~E-~AA~aaa~~D~GQFRTDv~~~~~RvRGAVIGDY---------~ 70 (90) T protein:vir:98 1 MAREGFQLSTTRRNVAAFLRSPGVRQAVEASTREIE-AAARQAAEPDAGQFRTDITEESNRVRGAVIGDY---------A 70 (90) T ss_pred CCCCCccccccchhhHHhhcChhHHHHHHHHHHHHH-HHHhhhccccccceecccccccceecceeeccc---------c Confidence 888777766544 35689999999987655443 344444444 5589999999999998775431 1 Q ss_pred CChhhhh-hhhhcC Q lcl|Aclame:pro 75 TPPLQQA-AMRVRK 87 (87) Q Consensus 75 aPlMqia-A~~~~~ 87 (87) +|-|..+ ++-+|- T Consensus 71 t~~pE~sRraLLRg 84 (90) T protein:vir:98 71 TADPEDSRRALLRG 84 (90) T ss_pred CCChhhHHHHHHHh Confidence 2333222 112222 No 9 >protein:vir:104091 Length: 111 # NCBI annotation: gp23 # Family: family:all:2819 # MgeID: mge:1656 # MgeName: Che12 # Cross-refs: genbank:acc:YP_655602;genbank:gi:109392473;genbank:GeneID:4156959 Probab=44.57 E-value=0.26 Score=23.75 Aligned_cols=84 Identities=17% Similarity=0.147 Sum_probs=65.0 Q ss_pred CccccCCcchhhhhccChhHHHHHHHHHHHHHhhhccc--------cCCCCCcc-cceeecCceeEEEEeccCCCceeee Q lcl|Aclame:pro 1 MGKLKIPISDDKKIRRSSEVRKACQTIGATIAVTAGRI--------AGDSDGYG-VEETVGSDRTRVNVYAQHNKTMKAE 71 (87) Q Consensus 1 mgkLd~P~seh~kIR~speV~~a~~~la~~~a~~Ag~i--------AG~pdgY~-te~~vGsDR~Ra~V~~es~kairaE 71 (87) |.|.- -+..| -+-++|+|++++.+-+.+++++|-+. .=.+-||. +++++-.+-+-++|.=+.|.|+--| T Consensus 1 ma~vy-~~~n~-vva~l~~vk~avr~e~~~v~~RAr~nLa~Arastr~~~~G~~pt~I~~a~gDVD~~v~l~apnamaiE 78 (111) T protein:vir:10 1 MAKVY-ANANE-AAARHVDTKRAVRRVNRDVEGRARSNLAQANSTTRVTPTGYFPAEIDSSEHDVDCYTTLHAPNAMALE 78 (111) T ss_pred Ccccc-cccCc-EEeechhhHHHHHHHHhhhhhHHHHHHHHhhhcccccccCcccceeeeecCCcceEEEecCCCchhhh Confidence 66542 22233 67889999999999999999998543 24577888 8888888889999999999999999 Q ss_pred cccCChhhhhhhhhcC Q lcl|Aclame:pro 72 AGATPPLQQAAMRVRK 87 (87) Q Consensus 72 ~k~aPlMqiaA~~~~~ 87 (87) .+-+|-=+ -+-.+-| T Consensus 79 fGh~psG~-f~~~~tk 93 (111) T protein:vir:10 79 FGHEPSGV-FAGTDTK 93 (111) T ss_pred hccCccce-ecccccC Confidence 99998733 3455555 No 10 >protein:vir:7776 Length: 119 # NCBI annotation: gp21 # Family: family:all:2819 # MgeID: mge:149 # MgeName: Bxz2 # Cross-refs: genbank:acc:NP_817610;genbank:gi:29566040;genbank:GeneID:1259234 Probab=41.13 E-value=0.39 Score=22.82 Aligned_cols=85 Identities=16% Similarity=0.050 Sum_probs=59.3 Q ss_pred CccccCCcc-hhhhhccChhHHHHHHHHHHHHHhhhcccc------------CCCCCcccceeecCceeEEEEeccCCCc Q lcl|Aclame:pro 1 MGKLKIPIS-DDKKIRRSSEVRKACQTIGATIAVTAGRIA------------GDSDGYGVEETVGSDRTRVNVYAQHNKT 67 (87) Q Consensus 1 mgkLd~P~s-eh~kIR~speV~~a~~~la~~~a~~Ag~iA------------G~pdgY~te~~vGsDR~Ra~V~~es~ka 67 (87) |.|+= +.. -.+-|-.+|+||+++..=+.+++++|-+-- =-|+|+ +++++-.+-+-.+|.=+.|.| T Consensus 1 Ma~~y-~~~~ln~vvA~l~~v~~~v~~E~~~v~~RA~~NLa~Arast~~~k~~gp~~~-~~Id~a~gdvD~~v~l~apna 78 (119) T protein:vir:77 1 MARLI-GQKAMNHVISHLDGVKDAVYAEAKERGRKAEANLAQARASTRWHKIFGPDHL-TRVTVTRGDVDSFINLEAPNA 78 (119) T ss_pred Ccccc-cccchhhhhhhchhHHHHHHHHHHhhhHHHHHHHHHHhhcccccceecCCCc-ceeccccCCcceEEeecCCCc Confidence 77764 333 134577899999999999999998874321 347777 888877778888999888999 Q ss_pred eeeecccCChhhh----hhhhh-cC Q lcl|Aclame:pro 68 MKAEAGATPPLQQ----AAMRV-RK 87 (87) Q Consensus 68 iraE~k~aPlMqi----aA~~~-~~ 87 (87) +--|.+-+|-.-- -=..| -| T Consensus 79 ~aIEfGhapsgvf~pG~~yg~vdtk 103 (119) T protein:vir:77 79 MAIEFGHQPSGVFGPGGMFGHLDTK 103 (119) T ss_pred hhhcccccccceecccccccccCCC Confidence 9999998885411 00011 11 No 11 >protein:vir:78163 Length: 92 # NCBI annotation: hypothetical protein # Family: family:all:29889 # MgeID: mge:1847 # MgeName: Min1 # Cross-refs: genbank:acc:YP_001294805;genbank:gi:149882826;genbank:GeneID:5309191 Probab=25.62 E-value=1.7 Score=19.30 Aligned_cols=86 Identities=23% Similarity=0.265 Sum_probs=60.3 Q ss_pred CccccCCcch-hhhhccChhHHHHHHHHHHHHHhhhcccc----C-CCCCcccceeecCceeEEEEeccCCCceeeeccc Q lcl|Aclame:pro 1 MGKLKIPISD-DKKIRRSSEVRKACQTIGATIAVTAGRIA----G-DSDGYGVEETVGSDRTRVNVYAQHNKTMKAEAGA 74 (87) Q Consensus 1 mgkLd~P~se-h~kIR~speV~~a~~~la~~~a~~Ag~iA----G-~pdgY~te~~vGsDR~Ra~V~~es~kairaE~k~ 74 (87) |..---|+.- .+.|-|||.|++-..-.|++.-.-|-+-| | --||.++|..-+..|.-+-|--..+|++-.|-++ T Consensus 1 madaftpNp~~FDqIl~s~~VrALt~gaAe~aLa~AKAsAPVDTGAYRDGL~iE~~q~~~RtT~MVVG~D~KTlLvESrT 80 (92) T protein:vir:78 1 MADAFTPNPTWFDQIMRTPKVRALVDGVAEETLADAKASAPVDTGAYRDGLHIEHRQGRSRETAMVVGSDEKTLLIESRT 80 (92) T ss_pred CCCccCCChhHHHHhhcccchhhhhhhhhhhhhhhhcccCcccccccccccchhhhhccccceeEEeecCcceeeeeccc Confidence 7666566653 47899999998876666655443333222 1 2388899999999999999999999999999999 Q ss_pred CChhhhhhhhhcC Q lcl|Aclame:pro 75 TPPLQQAAMRVRK 87 (87) Q Consensus 75 aPlMqiaA~~~~~ 87 (87) --|-. +--+-|. T Consensus 81 GNLak-alk~~rs 92 (92) T protein:vir:78 81 GNLAR-SVKRRRS 92 (92) T ss_pred chHHH-HHhhhcC Confidence 87632 1111122 No 12 >protein:vir:78298 Length: 131 # NCBI annotation: gp18 # Family: family:all:2819 # MgeID: mge:1849 # MgeName: Bethlehem # Cross-refs: genbank:acc:YP_001491670;genbank:gi:157786494;genbank:GeneID:5625776 Probab=25.42 E-value=1.5 Score=19.54 Aligned_cols=86 Identities=16% Similarity=-0.016 Sum_probs=56.8 Q ss_pred CccccCCcc-hhhhhccChhHHHHHHHHHHHHHhhhccc--------c---CCCCCcccceeecCceeEEEEeccCCCce Q lcl|Aclame:pro 1 MGKLKIPIS-DDKKIRRSSEVRKACQTIGATIAVTAGRI--------A---GDSDGYGVEETVGSDRTRVNVYAQHNKTM 68 (87) Q Consensus 1 mgkLd~P~s-eh~kIR~speV~~a~~~la~~~a~~Ag~i--------A---G~pdgY~te~~vGsDR~Ra~V~~es~kai 68 (87) |.|+ ++.. -.+-|-.+|+||+++..=+.+++++|-+- + |-.-|-.+++++-.+-+-.+|.=+.|.|+ T Consensus 1 ma~~-~~~~~ln~vvA~l~~vk~~v~~E~~~v~~RA~~NLa~Arast~~~k~~gp~hla~I~~~~gdvD~~v~Ldapna~ 79 (131) T protein:vir:78 1 MPLY-YGRSGLNKVVSHLPGVVHEMRSEADEVADRAKANLAAARASTQWEKIHGPDHLTKITRTNGSVDAYVNMEAPSPE 79 (131) T ss_pred Cccc-ccchhhhhhhhhchhHHHHHHHHHHhhhHHHHHHHHHHhhcCcccccccCCCcceeeeeeCCcceEEeecCCCch Confidence 7665 2333 23457889999999999999999887432 1 22223346777777778888888889999 Q ss_pred eeecccCChhhhh---hhhhcC Q lcl|Aclame:pro 69 KAEAGATPPLQQA---AMRVRK 87 (87) Q Consensus 69 raE~k~aPlMqia---A~~~~~ 87 (87) --|.+-+|-.--- .-++-| T Consensus 80 aIEfGhapsgvf~p~k~G~~tk 101 (131) T protein:vir:78 80 SIEYGHYPSGVFDPEKYGRVTK 101 (131) T ss_pred hheeccccccccCCcccCcccC Confidence 9999988843210 111222 No 13 >protein:vir:78503 Length: 131 # NCBI annotation: gp18 # Family: family:all:2819 # MgeID: mge:1853 # MgeName: U2 # Cross-refs: genbank:acc:YP_001491589;genbank:gi:157786412;genbank:GeneID:5625655 Probab=25.42 E-value=1.5 Score=19.54 Aligned_cols=86 Identities=16% Similarity=-0.016 Sum_probs=56.8 Q ss_pred CccccCCcc-hhhhhccChhHHHHHHHHHHHHHhhhccc--------c---CCCCCcccceeecCceeEEEEeccCCCce Q lcl|Aclame:pro 1 MGKLKIPIS-DDKKIRRSSEVRKACQTIGATIAVTAGRI--------A---GDSDGYGVEETVGSDRTRVNVYAQHNKTM 68 (87) Q Consensus 1 mgkLd~P~s-eh~kIR~speV~~a~~~la~~~a~~Ag~i--------A---G~pdgY~te~~vGsDR~Ra~V~~es~kai 68 (87) |.|+ ++.. -.+-|-.+|+||+++..=+.+++++|-+- + |-.-|-.+++++-.+-+-.+|.=+.|.|+ T Consensus 1 ma~~-~~~~~ln~vvA~l~~vk~~v~~E~~~v~~RA~~NLa~Arast~~~k~~gp~hla~I~~~~gdvD~~v~Ldapna~ 79 (131) T protein:vir:78 1 MPLY-YGRSGLNKVVSHLPGVVHEMRSEADEVADRAKANLAAARASTQWEKIHGPDHLTKITRTNGSVDAYVNMEAPSPE 79 (131) T ss_pred Cccc-ccchhhhhhhhhchhHHHHHHHHHHhhhHHHHHHHHHHhhcCcccccccCCCcceeeeeeCCcceEEeecCCCch Confidence 7665 2333 23457889999999999999999887432 1 22223346777777778888888889999 Q ss_pred eeecccCChhhhh---hhhhcC Q lcl|Aclame:pro 69 KAEAGATPPLQQA---AMRVRK 87 (87) Q Consensus 69 raE~k~aPlMqia---A~~~~~ 87 (87) --|.+-+|-.--- .-++-| T Consensus 80 aIEfGhapsgvf~p~k~G~~tk 101 (131) T protein:vir:78 80 SIEYGHYPSGVFDPEKYGRVTK 101 (131) T ss_pred hheeccccccccCCcccCcccC Confidence 9999988843210 111222 No 14 >protein:vir:2347 Length: 131 # NCBI annotation: gp17 # Family: family:all:2819 # MgeID: mge:51 # MgeName: Bxb1 # Cross-refs: genbank:acc:NP_075284;genbank:gi:12657871;genbank:GeneID:920131 Probab=25.42 E-value=1.5 Score=19.54 Aligned_cols=86 Identities=16% Similarity=-0.016 Sum_probs=56.8 Q ss_pred CccccCCcc-hhhhhccChhHHHHHHHHHHHHHhhhccc--------c---CCCCCcccceeecCceeEEEEeccCCCce Q lcl|Aclame:pro 1 MGKLKIPIS-DDKKIRRSSEVRKACQTIGATIAVTAGRI--------A---GDSDGYGVEETVGSDRTRVNVYAQHNKTM 68 (87) Q Consensus 1 mgkLd~P~s-eh~kIR~speV~~a~~~la~~~a~~Ag~i--------A---G~pdgY~te~~vGsDR~Ra~V~~es~kai 68 (87) |.|+ ++.. -.+-|-.+|+||+++..=+.+++++|-+- + |-.-|-.+++++-.+-+-.+|.=+.|.|+ T Consensus 1 ma~~-~~~~~ln~vvA~l~~vk~~v~~E~~~v~~RA~~NLa~Arast~~~k~~gp~hla~I~~~~gdvD~~v~Ldapna~ 79 (131) T protein:vir:23 1 MPLY-YGRSGLNKVVSHLPGVVHEMRSEADEVADRAKANLAAARASTQWEKIHGPDHLTKITRTNGSVDAYVNMEAPSPE 79 (131) T ss_pred Cccc-ccchhhhhhhhhchhHHHHHHHHHHhhhHHHHHHHHHHhhcCcccccccCCCcceeeeeeCCcceEEeecCCCch Confidence 7665 2333 23457889999999999999999887432 1 22223346777777778888888889999 Q ss_pred eeecccCChhhhh---hhhhcC Q lcl|Aclame:pro 69 KAEAGATPPLQQA---AMRVRK 87 (87) Q Consensus 69 raE~k~aPlMqia---A~~~~~ 87 (87) --|.+-+|-.--- .-++-| T Consensus 80 aIEfGhapsgvf~p~k~G~~tk 101 (131) T protein:vir:23 80 SIEYGHYPSGVFDPEKYGRVTK 101 (131) T ss_pred hheeccccccccCCcccCcccC Confidence 9999988843210 111222 No 15 >protein:vir:94654 Length: 142 # NCBI annotation: tail component protein # Family: family:all:1084 # MgeID: mge:1527 # MgeName: mu1/6 # Cross-refs: genbank:acc:YP_579211;genbank:gi:93007447;genbank:GeneID:5076773 Probab=20.84 E-value=2.1 Score=18.82 Aligned_cols=87 Identities=14% Similarity=0.168 Sum_probs=46.2 Q ss_pred CccccCCcch---hhhhccCh-----hHHHHHHHHHHHHHhhhccccC----C-CCCcccceeecCceeEEEEeccCCCc Q lcl|Aclame:pro 1 MGKLKIPISD---DKKIRRSS-----EVRKACQTIGATIAVTAGRIAG----D-SDGYGVEETVGSDRTRVNVYAQHNKT 67 (87) Q Consensus 1 mgkLd~P~se---h~kIR~sp-----eV~~a~~~la~~~a~~Ag~iAG----~-pdgY~te~~vGsDR~Ra~V~~es~ka 67 (87) |.++++=++- +++++..+ .+.++|+..+.++..+|-..+= . -+...++++.......+.|....+=| T Consensus 1 Ma~~~~~~~~~~l~~~l~~~~~~~~~~~~~~l~~~a~~i~~~ak~~aPv~TG~Lr~SI~~~~~~~g~~~~~~v~~~~~YA 80 (142) T protein:vir:94 1 MAGLNYRVNSTEFQGALRAALDRLTGAAREATEAAANDMVNMAKGLCPVDTGRLRSSIQAVPSGGRFSFSVTIGTNVTYA 80 (142) T ss_pred CceeEEEecHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCccchhhhccceeeeccCCceEEEEEecCcccc Confidence 9999877655 45666654 3566778888888777755541 0 01223333333344455555555556 Q ss_pred eeeecccCCh--------------------------------hhhhhhhhcC Q lcl|Aclame:pro 68 MKAEAGATPP--------------------------------LQQAAMRVRK 87 (87) Q Consensus 68 iraE~k~aPl--------------------------------MqiaA~~~~~ 87 (87) .-.|.++.|. |.-|..+-+. T Consensus 81 ~~vE~Gt~~~~i~pk~~k~l~~~~~~~~~~~v~~pG~~~~pfl~~A~~~~~~ 132 (142) T protein:vir:94 81 ADVEYGTAPHVIVPKDKKALYWPGAAHPVAKVNHPGTRAQPFMRPAIAAAST 132 (142) T ss_pred hhhhccCCCceeccCCCccceecccceeeeeeeecCCCCCcchhHHHHHHHH Confidence 6666666543 2221111111 No 16 >protein:vir:98409 Length: 108 # NCBI annotation: hypothetical protein # Family: family:all:180 # MgeID: mge:83 # MgeName: ul36 # Cross-refs: genbank:acc:YP_001210363;genbank:gi:146334932;genbank:GeneID:5114801 Probab=20.27 E-value=2.2 Score=18.70 Aligned_cols=80 Identities=14% Similarity=0.107 Sum_probs=52.8 Q ss_pred CccccCCcchhhhhccChhHHHHHHHHHHHHHhhhccccCCCCCcc---cceeecCceeEEEEeccCCCceeeecccC-- Q lcl|Aclame:pro 1 MGKLKIPISDDKKIRRSSEVRKACQTIGATIAVTAGRIAGDSDGYG---VEETVGSDRTRVNVYAQHNKTMKAEAGAT-- 75 (87) Q Consensus 1 mgkLd~P~seh~kIR~speV~~a~~~la~~~a~~Ag~iAG~pdgY~---te~~vGsDR~Ra~V~~es~kairaE~k~a-- 75 (87) +-+|. ++-.--.+.+++++.|..++..|-..|+-..|.= ..+....+..++.|++...-|.-.|.+|. T Consensus 10 ~~~l~-------~~~~~~~~~~al~~~a~~i~~~ak~~apvdTG~Lr~si~~~~~~~~~~~~V~~~~~Ya~~vE~GT~~m 82 (108) T protein:vir:98 10 QKKLR-------KNATLNDVKHVVKRNTVSMNKNMQNLAPVDTGNMKRSITSEFTDGGLTGTTIPHTDYAGYVEYGTRFQ 82 (108) T ss_pred HHHHH-------HhhhHHHHHHHHHHHHHHHHHHHHHhCCCCchhhHhhceeeeecCceEEEeecCCCccceeecccccc Confidence 22221 1111234677899999999998888887666542 22344556788999999888998998874 Q ss_pred ---ChhhhhhhhhcC Q lcl|Aclame:pro 76 ---PPLQQAAMRVRK 87 (87) Q Consensus 76 ---PlMqiaA~~~~~ 87 (87) |+|.-|....++ T Consensus 83 ~aqPFl~pa~~~~~~ 97 (108) T protein:vir:98 83 AAQPFVKPAFDVQKK 97 (108) T ss_pred CCCcchhhHHHHHHH Confidence 677666655544 Done!