Query lcl|Aclame:protein:vir:102438|NCBI_annot:gp23|genbank:acc:YP_655300;genbank:gi:109521863;genbank:GeneID:4157753 Match_columns 252 No_of_seqs 20 out of 24 Neff 3.3 Searched_HMMs 1612 Date Sun Dec 1 22:05:57 2013 Command /home/guerois/workspace/virfam/python/lib/hhsearch//hhsearch2 -i .//seq/seq_58 -d /home/guerois/workspace/virfam/python/profile_database/capsid_neck_tail.hhm -glob -cpu 7 -o .//seq/HHR/seq_58_vs_rec_db.hhr No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM 1 protein:vir:102438 Length: 252 100.0 1E-144 7E-148 809.9 23.3 252 1-252 1-252 (252) 2 protein:vir:106038 Length: 246 100.0 2E-134 1E-137 753.7 22.3 244 1-252 1-246 (246) 3 protein:vir:107532 Length: 245 100.0 1E-129 6E-133 727.8 20.7 243 1-252 1-245 (245) 4 protein:vir:97979 Length: 245 100.0 1E-129 6E-133 727.8 20.7 243 1-252 1-245 (245) 5 protein:vir:106490 Length: 271 100.0 3E-115 2E-118 648.5 19.8 237 1-252 3-253 (271) 6 protein:vir:99098 Length: 205 100.0 3E-115 2E-118 648.7 15.9 205 46-252 1-205 (205) 7 protein:vir:8666 Length: 205 # 100.0 3E-115 2E-118 648.7 15.9 205 46-252 1-205 (205) 8 protein:vir:8104 Length: 170 # 98.3 8.7E-09 5.4E-12 64.8 8.7 151 75-249 1-170 (170) 9 protein:vir:7857 Length: 188 # 97.5 2.9E-06 1.8E-09 50.9 10.6 169 1-249 1-188 (188) 10 protein:vir:101652 Length: 188 97.5 2.9E-06 1.8E-09 50.9 10.6 169 1-249 1-188 (188) 11 protein:vir:1435 Length: 188 # 97.4 6.5E-05 4E-08 43.5 15.9 166 1-251 1-188 (188) 12 protein:vir:81255 Length: 180 96.9 0.00011 6.9E-08 42.3 13.2 174 7-248 1-180 (180) 13 protein:vir:80320 Length: 188 96.7 0.0002 1.3E-07 40.8 13.4 166 1-251 1-188 (188) 14 protein:vir:8326 Length: 201 # 92.0 0.007 4.3E-06 32.4 9.4 157 71-236 1-201 (201) 15 protein:vir:3160 Length: 198 # 80.1 0.098 6.1E-05 26.1 11.3 176 15-241 1-198 (198) 16 protein:vir:8430 Length: 189 # 77.6 0.12 7.6E-05 25.6 9.8 165 39-249 1-189 (189) No 1 >protein:vir:102438 Length: 252 # NCBI annotation: gp23 # Family: family:all:2801 # MgeID: mge:1618 # MgeName: Pipefish # Cross-refs: genbank:acc:YP_655300;genbank:gi:109521863;genbank:GeneID:4157753 Probab=100.00 E-value=1.1e-144 Score=809.92 Aligned_cols=252 Identities=100% Similarity=1.645 Sum_probs=251.4 Q ss_pred CeeecCCCCccCCcccCCCcCCCccchhhHHHHHHHHHHHHHHHHHHHHHhhCccccccceEEecCCCCCCCcCCCCCcC Q lcl|Aclame:pro 1 MSCDWPVDTTCLPDVPALPDDATPDQEAEHEASLASRAAAISIARDVLWALSGRQFGICPRSVRPCPNGVRNRTVVGLMT 80 (252) Q Consensus 1 m~c~Wpvd~sc~P~lp~~~d~~~~~~~a~~~~a~a~r~~a~~~A~~vLWalSGRqfG~C~~tvRPC~~~~~~~~~~g~~s 80 (252) |||+||||++|||++|+++|+++|+++++|+++|++|++|++||++|||++||||||+|++|||||+++|.++.++|+++ T Consensus 1 ~~~~Wpvd~t~~Pd~p~lpe~~~p~~~~~~~~~la~~~aA~~iAs~vLW~~sGRqfG~c~~tvRPc~~~~~~r~~~g~~t 80 (252) T protein:vir:10 1 MSCDWPVDTTCLPDVPALPDDATPDQEAEHEASLASRAAAISIARDVLWALSGRQFGICPRSVRPCPNGVRNRTVVGLMT 80 (252) T ss_pred CeeccCcccccCcccccCCCCCCCCcchhhHHHHHhhhhhHHHHHHHHHHhhCCceeccceeeccCCCCCCCccccCccc Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred CCCCcccCCceeeeCCCCCCCcccCCCceEecCCCcCcceEEEeCCeeecccceEecCceEEEcCCCCCchhhcCCCCCC Q lcl|Aclame:pro 81 GYVLSRFDGRWSQWPCGCGSTCLRSGPKIIHLPGPARSIETVKIGGEVLDPAAYTLEGDYLYRTDGGVWPEQDLSVPASA 160 (252) Q Consensus 81 ~~~~~~~gg~W~n~~CGC~g~C~~~gp~~VhLpGPv~~v~eV~i~G~vldp~~Y~le~~~L~R~~g~~WP~Q~l~~P~ge 160 (252) +++.+|+||+|+|++|||+++|+++||++|||||||++|+||+|||++||||+|+||+|+|||+|+++||+|||++|+|| T Consensus 81 ~~~~~~~gg~W~n~~CGc~~~C~~~~~~~vhLpGPv~~V~eV~i~g~vl~ps~Y~~egn~L~R~~g~~WP~QdL~~p~~E 160 (252) T protein:vir:10 81 GYVLSRFDGRWSQWPCGCGSTCLRSGPKIIHLPGPARSIETVKIGGEVLDPAAYTLEGDYLYRTDGGVWPEQDLSVPASA 160 (252) T ss_pred ccccccCCCceeecCCCCCCCCCccCceeEecCcchheeeeeeECCEEeCccceeecCceEEEeCCCCCcHhHcCCCCCC Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred CCceEEEeecccccChhHHHHHHHHHHHHHHhCCCCCccCchhhhhhhhccceEEeeChhhhhcCCCCchhHHHHHHhhh Q lcl|Aclame:pro 161 PGGWEVVYRQGNPVPPGVGKFVGQLAAEFFAACNDGKCKLPRNVTTVTRNGVSYQVVNPTDVYATRKTGLPEVDLWLAAV 240 (252) Q Consensus 161 pGTw~VtY~rG~pvP~g~~~lv~~La~e~~~ac~g~~CrLP~~vt~~sRqGVt~e~~dp~~i~a~G~TGlpevD~WLaaV 240 (252) ||||+|||+||+|||+|+++|+|+|||||++||+|++||||+|||++||||||||++||++|||+|||||||||+||++| T Consensus 161 pgT~aVtY~rG~PvP~g~~~~~~~La~e~~~ac~~g~C~LP~~vT~~sRqGVt~ev~dP~~i~a~g~TGlpevDlwLatV 240 (252) T protein:vir:10 161 PGGWEVVYRQGNPVPPGVGKFVGQLAAEFFAACNDGKCKLPRNVTTVTRNGVSYQVVNPTDVYATRKTGLPEVDLWLAAV 240 (252) T ss_pred CcceEEEeccccccCHhHHHHHHHHHHHHHHhcCCCCccCchhhheeeeccceEEEecCchhhcCCCccCchhhhhhhhc Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred CchhhcCCcccC Q lcl|Aclame:pro 241 NPSRIPMAPTVR 252 (252) Q Consensus 241 NP~~L~~~p~Vr 252 (252) |||+|+|||+|| T Consensus 241 NP~~L~~~p~V~ 252 (252) T protein:vir:10 241 NPSRIPMAPTVR 252 (252) T ss_pred CchhhcCCccCC Confidence 999999999999 No 2 >protein:vir:106038 Length: 246 # NCBI annotation: gp20 # Family: family:all:2801 # MgeID: mge:1505 # MgeName: Cooper # Cross-refs: genbank:acc:YP_654917;genbank:gi:109392373;genbank:GeneID:4157066 Probab=100.00 E-value=1.9e-134 Score=753.72 Aligned_cols=244 Identities=44% Similarity=0.838 Sum_probs=233.2 Q ss_pred CeeecCCCCccCCcccCCCcCCCccchhhHHHHHHHHHHHHHHHHHHHHHhhCccccccceEEecCCCCCCC-cCCCCCc Q lcl|Aclame:pro 1 MSCDWPVDTTCLPDVPALPDDATPDQEAEHEASLASRAAAISIARDVLWALSGRQFGICPRSVRPCPNGVRN-RTVVGLM 79 (252) Q Consensus 1 m~c~Wpvd~sc~P~lp~~~d~~~~~~~a~~~~a~a~r~~a~~~A~~vLWalSGRqfG~C~~tvRPC~~~~~~-~~~~g~~ 79 (252) |+|+||||++|||.+|+.-|+. |++|+++|++|++||++|||++||||||+|++||||||++|.. ....|.+ T Consensus 1 ~~~~Wpvd~~~lp~~p~~~~p~-------~~~a~~~q~~a~~~As~vLWa~sGRqfG~c~~tvRPc~~~~~~~~r~~g~~ 73 (246) T protein:vir:10 1 MAFTWPVDRSEFPALPDEADPG-------YAQAVLEQRAAADLAVGVMWALAGRQFGLLDVTSRPCPEYASVLYRDHGQV 73 (246) T ss_pred CcccCCCChhhcCCCCCcCCch-------HHHHHHHHHHHHHHHHHHHHHhhCCccccchheeccCCCCCCcCCcccccc Confidence 9999999999999877766663 8999999999999999999999999999999999999997743 2234778 Q ss_pred CCCCCcccCCceeeeCCCCCCCcccCCCceEecCCCcCcceEEEeCCeeecccceEecCceEEEcCCCCCchhhcCCCCC Q lcl|Aclame:pro 80 TGYVLSRFDGRWSQWPCGCGSTCLRSGPKIIHLPGPARSIETVKIGGEVLDPAAYTLEGDYLYRTDGGVWPEQDLSVPAS 159 (252) Q Consensus 80 s~~~~~~~gg~W~n~~CGC~g~C~~~gp~~VhLpGPv~~v~eV~i~G~vldp~~Y~le~~~L~R~~g~~WP~Q~l~~P~g 159 (252) ++++++|+||+|+|++|||+++|+++||++||||||||+|+||+|||++|||++|+||+|+|||+ |++||||||++|+| T Consensus 74 ~~~~~sw~Gg~W~n~~Cgc~~~C~~~gp~~VhLpgPv~~V~eV~i~G~vl~Pa~Y~~e~n~L~R~-g~~WP~QdL~~p~g 152 (246) T protein:vir:10 74 TSYVVSWEGYGWINLGCGCSGGCRYGGPRAVHLPGPVHAVTEVKLAGAVLAPAGYQLENNVLYRV-GARWPHQDLGRPLG 152 (246) T ss_pred cccccccccCceeeeCCCCccccccCCCceeecCcchheeeeeeECCEeeCCcceeecCceEEEe-CCCCChhhcCCCCC Confidence 89999999999999999999999999999999999999999999999999999999999999999 55799999999999 Q ss_pred CCCceEEEeecccccChhHHHHHHHHHHHHHHhCCC-CCccCchhhhhhhhccceEEeeChhhhhcCCCCchhHHHHHHh Q lcl|Aclame:pro 160 APGGWEVVYRQGNPVPPGVGKFVGQLAAEFFAACND-GKCKLPRNVTTVTRNGVSYQVVNPTDVYATRKTGLPEVDLWLA 238 (252) Q Consensus 160 epGTw~VtY~rG~pvP~g~~~lv~~La~e~~~ac~g-~~CrLP~~vt~~sRqGVt~e~~dp~~i~a~G~TGlpevD~WLa 238 (252) |||||+|||+||+|||+|+++++++|||||+++|++ ++||||+|||++||||||||++|||+||++|||||||||+||+ T Consensus 153 EpgTw~VtY~rG~pvP~~~~~~t~~LA~e~~~a~~~~g~C~LPr~vT~~sRqGVtye~~dp~~i~a~g~TGlPevDlwLa 232 (246) T protein:vir:10 153 EARTWSVTYQRGIPVPESYAALTGLLAKEFLDALDNEGRCRLPRTVTTASRQGVTYRAYDPQAIYANGKTGLPEIDLVLA 232 (246) T ss_pred CCcceEEEeccCCCCChhHHHHHHHHHHHHHHhcCCCccccCcchhheeeeccceEEEecCcccccCCCccCchhhhhhh Confidence 999999999999999999999999999999999998 8999999999999999999999999999999999999999999 Q ss_pred hhCchhhcCCcccC Q lcl|Aclame:pro 239 AVNPSRIPMAPTVR 252 (252) Q Consensus 239 aVNP~~L~~~p~Vr 252 (252) |||||+|+|||+|= T Consensus 233 tVNP~~L~~ap~V~ 246 (246) T protein:vir:10 233 AVNPHALMAAPTVL 246 (246) T ss_pred hcCchhhccCcccC Confidence 99999999999999 No 3 >protein:vir:107532 Length: 245 # NCBI annotation: gp22 # Family: family:all:2801 # MgeID: mge:1481 # MgeName: PG1 # Cross-refs: genbank:acc:NP_943800;genbank:gi:38638425;genbank:GeneID:2657212 Probab=100.00 E-value=1e-129 Score=727.79 Aligned_cols=243 Identities=45% Similarity=0.865 Sum_probs=234.0 Q ss_pred CeeecCCCCccCCcccCCCcCCCccchhhHHHHHHHHHHHHHHHHHHHHHhhCccccccceEEecCCCCCCCcCCCCCcC Q lcl|Aclame:pro 1 MSCDWPVDTTCLPDVPALPDDATPDQEAEHEASLASRAAAISIARDVLWALSGRQFGICPRSVRPCPNGVRNRTVVGLMT 80 (252) Q Consensus 1 m~c~Wpvd~sc~P~lp~~~d~~~~~~~a~~~~a~a~r~~a~~~A~~vLWalSGRqfG~C~~tvRPC~~~~~~~~~~g~~s 80 (252) |||+||||+||||+||+++||.+ ++|++++++|.+|++||++|||++||||||+|+++|||||. .++...+.++ T Consensus 1 ~~~~Wpvd~~~~p~~p~~~~~~~----~~~~~~~a~~~aa~~iAs~vLW~~sGRqfG~c~~~vRPCp~--~~~~~~~~~~ 74 (245) T protein:vir:10 1 MTFEWPINRAGLPALPELTDPPS----AEYLKALAERNAAESVAVAIMWALSGRQFGTYETIARPCPT--RPRGNPFAYR 74 (245) T ss_pred CeeccCCcccCCCcccccCCCCC----cchhHHHHhhhhHHHHHHHHHHHhcCceeeccccccccCCc--CCCCcccccc Confidence 99999999999999999999995 58999999999999999999999999999999999999984 4555557889 Q ss_pred CCCCcccCCceeeeCCCCCC-CcccCCCceEecCCCcCcceEEEeCCeeecccceEecCceEEEcCCCCCchhhcCCCCC Q lcl|Aclame:pro 81 GYVLSRFDGRWSQWPCGCGS-TCLRSGPKIIHLPGPARSIETVKIGGEVLDPAAYTLEGDYLYRTDGGVWPEQDLSVPAS 159 (252) Q Consensus 81 ~~~~~~~gg~W~n~~CGC~g-~C~~~gp~~VhLpGPv~~v~eV~i~G~vldp~~Y~le~~~L~R~~g~~WP~Q~l~~P~g 159 (252) ++.+.|+++.|. +|||.+ .|+++||++|||||||++|+||+|||++||||+|++|+|+|||+|++ ||||||++|+| T Consensus 75 s~~g~W~g~~W~--~cgC~g~~C~~~gp~vvhLpgPv~~V~eV~i~g~vl~ps~Yv~e~n~L~Rr~~~-WP~QdL~~p~~ 151 (245) T protein:vir:10 75 SDDLVWTGEGWL--TCGCVGTGCRIVGPNVVHLPGPVHEVTRVEIGGVDLSPAVWVAEGNKLYRREAP-WPAQDLNRPLG 151 (245) T ss_pred ccceeecCCcee--eccccCCccccccceeeecccccceeeeeeECCEEeCchheeecCceEEEeCCC-CchhhcCCCCC Confidence 999999999999 699976 79999999999999999999999999999999999999999999985 99999999999 Q ss_pred CCCceEEEeecccccChhHHHHHHHHHHHHHHhCCC-CCccCchhhhhhhhccceEEeeChhhhhcCCCCchhHHHHHHh Q lcl|Aclame:pro 160 APGGWEVVYRQGNPVPPGVGKFVGQLAAEFFAACND-GKCKLPRNVTTVTRNGVSYQVVNPTDVYATRKTGLPEVDLWLA 238 (252) Q Consensus 160 epGTw~VtY~rG~pvP~g~~~lv~~La~e~~~ac~g-~~CrLP~~vt~~sRqGVt~e~~dp~~i~a~G~TGlpevD~WLa 238 (252) |||||+|||+||+|||+|+++|+++|||||++||+| ++||||+|||++||||||||++||++||++|||||||||+||+ T Consensus 152 EpgT~aVtY~rG~pvP~g~~~~~~~La~e~~~a~~~~g~C~LP~~vT~~sRqGVt~ev~dP~~i~a~g~TGlpevDlwLa 231 (245) T protein:vir:10 152 DVNTWGVHYTRGVPVPPGISELTGILVKEILGALEDVGRCRLPRTVTTASRNGVTYRAYDPAVIYRNGKTGLPEIDLWLA 231 (245) T ss_pred CCcceEEEeccccccChhHHHHHHHHHHHHHHHhCCCCCccCcchhheeeeccceEEEecCchhhcCCCccCchhhhhhh Confidence 999999999999999999999999999999999988 8999999999999999999999999999999999999999999 Q ss_pred hhCchhhcCCcccC Q lcl|Aclame:pro 239 AVNPSRIPMAPTVR 252 (252) Q Consensus 239 aVNP~~L~~~p~Vr 252 (252) +||||+|+|||+|= T Consensus 232 tVNP~~L~~~p~V~ 245 (245) T protein:vir:10 232 TVNPNALMAAPTVI 245 (245) T ss_pred hcCchhhccCcccC Confidence 99999999999999 No 4 >protein:vir:97979 Length: 245 # NCBI annotation: gp22 # Family: family:all:2801 # MgeID: mge:1482 # MgeName: Orion # Cross-refs: genbank:acc:YP_655118;genbank:gi:109391868;genbank:GeneID:4157342 Probab=100.00 E-value=1e-129 Score=727.79 Aligned_cols=243 Identities=45% Similarity=0.865 Sum_probs=234.0 Q ss_pred CeeecCCCCccCCcccCCCcCCCccchhhHHHHHHHHHHHHHHHHHHHHHhhCccccccceEEecCCCCCCCcCCCCCcC Q lcl|Aclame:pro 1 MSCDWPVDTTCLPDVPALPDDATPDQEAEHEASLASRAAAISIARDVLWALSGRQFGICPRSVRPCPNGVRNRTVVGLMT 80 (252) Q Consensus 1 m~c~Wpvd~sc~P~lp~~~d~~~~~~~a~~~~a~a~r~~a~~~A~~vLWalSGRqfG~C~~tvRPC~~~~~~~~~~g~~s 80 (252) |||+||||+||||+||+++||.+ ++|++++++|.+|++||++|||++||||||+|+++|||||. .++...+.++ T Consensus 1 ~~~~Wpvd~~~~p~~p~~~~~~~----~~~~~~~a~~~aa~~iAs~vLW~~sGRqfG~c~~~vRPCp~--~~~~~~~~~~ 74 (245) T protein:vir:97 1 MTFEWPINRAGLPALPELTDPPS----AEYLKALAERNAAESVAVAIMWALSGRQFGTYETIARPCPT--RPRGNPFAYR 74 (245) T ss_pred CeeccCCcccCCCcccccCCCCC----cchhHHHHhhhhHHHHHHHHHHHhcCceeeccccccccCCc--CCCCcccccc Confidence 99999999999999999999995 58999999999999999999999999999999999999984 4555557889 Q ss_pred CCCCcccCCceeeeCCCCCC-CcccCCCceEecCCCcCcceEEEeCCeeecccceEecCceEEEcCCCCCchhhcCCCCC Q lcl|Aclame:pro 81 GYVLSRFDGRWSQWPCGCGS-TCLRSGPKIIHLPGPARSIETVKIGGEVLDPAAYTLEGDYLYRTDGGVWPEQDLSVPAS 159 (252) Q Consensus 81 ~~~~~~~gg~W~n~~CGC~g-~C~~~gp~~VhLpGPv~~v~eV~i~G~vldp~~Y~le~~~L~R~~g~~WP~Q~l~~P~g 159 (252) ++.+.|+++.|. +|||.+ .|+++||++|||||||++|+||+|||++||||+|++|+|+|||+|++ ||||||++|+| T Consensus 75 s~~g~W~g~~W~--~cgC~g~~C~~~gp~vvhLpgPv~~V~eV~i~g~vl~ps~Yv~e~n~L~Rr~~~-WP~QdL~~p~~ 151 (245) T protein:vir:97 75 SDDLVWTGEGWL--TCGCVGTGCRIVGPNVVHLPGPVHEVTRVEIGGVDLSPAVWVAEGNKLYRREAP-WPAQDLNRPLG 151 (245) T ss_pred ccceeecCCcee--eccccCCccccccceeeecccccceeeeeeECCEEeCchheeecCceEEEeCCC-CchhhcCCCCC Confidence 999999999999 699976 79999999999999999999999999999999999999999999985 99999999999 Q ss_pred CCCceEEEeecccccChhHHHHHHHHHHHHHHhCCC-CCccCchhhhhhhhccceEEeeChhhhhcCCCCchhHHHHHHh Q lcl|Aclame:pro 160 APGGWEVVYRQGNPVPPGVGKFVGQLAAEFFAACND-GKCKLPRNVTTVTRNGVSYQVVNPTDVYATRKTGLPEVDLWLA 238 (252) Q Consensus 160 epGTw~VtY~rG~pvP~g~~~lv~~La~e~~~ac~g-~~CrLP~~vt~~sRqGVt~e~~dp~~i~a~G~TGlpevD~WLa 238 (252) |||||+|||+||+|||+|+++|+++|||||++||+| ++||||+|||++||||||||++||++||++|||||||||+||+ T Consensus 152 EpgT~aVtY~rG~pvP~g~~~~~~~La~e~~~a~~~~g~C~LP~~vT~~sRqGVt~ev~dP~~i~a~g~TGlpevDlwLa 231 (245) T protein:vir:97 152 DVNTWGVHYTRGVPVPPGISELTGILVKEILGALEDVGRCRLPRTVTTASRNGVTYRAYDPAVIYRNGKTGLPEIDLWLA 231 (245) T ss_pred CCcceEEEeccccccChhHHHHHHHHHHHHHHHhCCCCCccCcchhheeeeccceEEEecCchhhcCCCccCchhhhhhh Confidence 999999999999999999999999999999999988 8999999999999999999999999999999999999999999 Q ss_pred hhCchhhcCCcccC Q lcl|Aclame:pro 239 AVNPSRIPMAPTVR 252 (252) Q Consensus 239 aVNP~~L~~~p~Vr 252 (252) +||||+|+|||+|= T Consensus 232 tVNP~~L~~~p~V~ 245 (245) T protein:vir:97 232 TVNPNALMAAPTVI 245 (245) T ss_pred hcCchhhccCcccC Confidence 99999999999999 No 5 >protein:vir:106490 Length: 271 # NCBI annotation: Pas19 # Family: family:all:2801 # MgeID: mge:1680 # MgeName: phiAsp2 # Cross-refs: genbank:acc:YP_024805;genbank:gi:48697420;genbank:GeneID:2846147 Probab=100.00 E-value=2.9e-115 Score=648.50 Aligned_cols=237 Identities=32% Similarity=0.602 Sum_probs=211.1 Q ss_pred CeeecCCCCccCCcccCCCcCCCccchhhHHHHHHHHHHHHHHHHHHHHHhhCccccccceEEecCCCCCCCcCCC-CC- Q lcl|Aclame:pro 1 MSCDWPVDTTCLPDVPALPDDATPDQEAEHEASLASRAAAISIARDVLWALSGRQFGICPRSVRPCPNGVRNRTVV-GL- 78 (252) Q Consensus 1 m~c~Wpvd~sc~P~lp~~~d~~~~~~~a~~~~a~a~r~~a~~~A~~vLWalSGRqfG~C~~tvRPC~~~~~~~~~~-g~- 78 (252) --|+|||| |++|.+++++.+++++++ ++|+++|++|||++||||||+|++|||||++.+...++. ++ T Consensus 3 ~pc~Wpvd----~~~~~~~~~~~~d~~~~~-------~~A~~~As~vLW~~sGRqfG~c~~tvRPc~~~r~~~g~~~~~~ 71 (271) T protein:vir:10 3 APCTWDVD----PEALGVCEGWAEKPEAIQ-------ETALALASSYLWGATGRRFGICPVSVRPSQTDRTELAYQAFPV 71 (271) T ss_pred CCCCCCcc----cccccCCCCCCcCHHHHH-------HHHHHHHHHHHHHhhCCeeecchheeccCCCcccccccccccc Confidence 56999999 777778888877665544 456669999999999999999999999999865322111 11 Q ss_pred -----cCCCCC--cccCCceeeeCCCCCCCcccCCCceEecCCCcCcceEEEeCCeeecccceEec----CceEEEcCCC Q lcl|Aclame:pro 79 -----MTGYVL--SRFDGRWSQWPCGCGSTCLRSGPKIIHLPGPARSIETVKIGGEVLDPAAYTLE----GDYLYRTDGG 147 (252) Q Consensus 79 -----~s~~~~--~~~gg~W~n~~CGC~g~C~~~gp~~VhLpGPv~~v~eV~i~G~vldp~~Y~le----~~~L~R~~g~ 147 (252) +..-|. .++||+|+|+ ||.+.|.+++||+|||||||++|+||+|||++|||++|+|| +|+|||.|++ T Consensus 72 ~pg~g~~~~w~~p~l~gg~W~n~--gC~~~c~~~~p~~V~LpgPv~~V~eV~i~G~vl~Ps~Y~v~v~rg~~~l~R~dg~ 149 (271) T protein:vir:10 72 APGLGGLGEPGGPFLFGGRWFNQ--GCATACCGNSACAVVLRGPVASVDEVIVGDEVVPASAYRVDVTRGAYLLVRIDGE 149 (271) T ss_pred CCccCcCcccccceecCCceecc--cccccCCCCCCceEecCcchheeeeeeECCEeeCccceeeeeecCCeeEeecCCc Confidence 011111 2358999999 99999999999999999999999999999999999999999 4679999999 Q ss_pred CCc-hhhcCCCCCCCCceEEEeecccccChhHHHHHHHHHHHHHHhCCCCCccCchhhhhhhhccceEEeeChhhhhcCC Q lcl|Aclame:pro 148 VWP-EQDLSVPASAPGGWEVVYRQGNPVPPGVGKFVGQLAAEFFAACNDGKCKLPRNVTTVTRNGVSYQVVNPTDVYATR 226 (252) Q Consensus 148 ~WP-~Q~l~~P~gepGTw~VtY~rG~pvP~g~~~lv~~La~e~~~ac~g~~CrLP~~vt~~sRqGVt~e~~dp~~i~a~G 226 (252) +|| ||||++|+||||||+|||+||+|||+|+++++|+|||||+++|++++||||+|||++||||||||++||++ ++| T Consensus 150 ~WP~~QdL~~P~~EpgT~aVtY~rG~pvP~g~~~a~~~LA~e~~~ac~~g~C~LP~~vT~~sRqGVTye~a~p~~--~~G 227 (271) T protein:vir:10 150 CWPMCQDFRAEPGEPGTFEITYGLGTALPVALQIATALLACEYAKHLTGGACALPARMTRLSRQGVEVEVAAPDP--AAG 227 (271) T ss_pred cCcchhhcCCCCCCCcceEEEeccCCCCChhHHHHHHHHHHHHHHhcCCCCCcCchhheeeeecceeEEEeCCCc--ccC Confidence 999 89999999999999999999999999999999999999999999999999999999999999999999995 999 Q ss_pred CCchhHHHHHHhhhCchhhcCCcccC Q lcl|Aclame:pro 227 KTGLPEVDLWLAAVNPSRIPMAPTVR 252 (252) Q Consensus 227 ~TGlpevD~WLaaVNP~~L~~~p~Vr 252 (252) ||||||||+||++||||+|+|||+|= T Consensus 228 ~TGlPevDlwLatVNP~~L~~~p~V~ 253 (271) T protein:vir:10 228 TTGVKMVDEVISTLNPGGLRRPPVVL 253 (271) T ss_pred ccCcchhhhhhhhcCchhhcCCceee Confidence 99999999999999999999999998 No 6 >protein:vir:99098 Length: 205 # NCBI annotation: gp22 # Family: family:all:2801 # MgeID: mge:1608 # MgeName: Qyrzula # Cross-refs: genbank:acc:YP_655702;genbank:gi:109521780;genbank:GeneID:4157820 Probab=100.00 E-value=2.7e-115 Score=648.66 Aligned_cols=205 Identities=46% Similarity=0.880 Sum_probs=198.0 Q ss_pred HHHHHhhCccccccceEEecCCCCCCCcCCCCCcCCCCCcccCCceeeeCCCCCCCcccCCCceEecCCCcCcceEEEeC Q lcl|Aclame:pro 46 DVLWALSGRQFGICPRSVRPCPNGVRNRTVVGLMTGYVLSRFDGRWSQWPCGCGSTCLRSGPKIIHLPGPARSIETVKIG 125 (252) Q Consensus 46 ~vLWalSGRqfG~C~~tvRPC~~~~~~~~~~g~~s~~~~~~~gg~W~n~~CGC~g~C~~~gp~~VhLpGPv~~v~eV~i~ 125 (252) +|||++||||||+|++||||||...+.+. .+.|.|+++.|.||+|+|++|||.++|+++||++|||||||++|+||+|| T Consensus 1 ~vLW~~sGRqfG~c~~tvRPcP~~~g~~~-~~~~~s~~~~~~G~~W~n~~cgc~~~C~~~gp~~V~LpgPv~~V~eV~i~ 79 (205) T protein:vir:99 1 MVLWAFTGRQFGLCETTVRPCPGGGGPRD-MRPWSQPLLWWDGTHWLNASCGCAGRCQVSGPGVVHLPSPAAEVLAVTLG 79 (205) T ss_pred CeeecccCceeecceeeeecCCCCCCCCC-CCccccccccccCcceeeeCCCCccccccCCCceeecCcchheeeeeeEC Confidence 89999999999999999999987555433 34668899999999999999999999999999999999999999999999 Q ss_pred CeeecccceEecCceEEEcCCCCCchhhcCCCCCCCCceEEEeecccccChhHHHHHHHHHHHHHHhCCCCCccCchhhh Q lcl|Aclame:pro 126 GEVLDPAAYTLEGDYLYRTDGGVWPEQDLSVPASAPGGWEVVYRQGNPVPPGVGKFVGQLAAEFFAACNDGKCKLPRNVT 205 (252) Q Consensus 126 G~vldp~~Y~le~~~L~R~~g~~WP~Q~l~~P~gepGTw~VtY~rG~pvP~g~~~lv~~La~e~~~ac~g~~CrLP~~vt 205 (252) |++||||+|++|+|+|||+|+++||||||++|+||||||+|||+||+|||+|+++|+|+|||||++||++++||||+||| T Consensus 80 g~vv~pa~y~~e~n~L~R~~~~~WP~QdL~~p~~EpgT~aVtY~~G~pvP~g~~~~~~~La~e~~~ac~~g~C~LP~~vT 159 (205) T protein:vir:99 80 DTVLDESEYVLEGNALYRRGGKAWPSQDLGRPLGERGTWSVQYLRGLPVPAGGDKMAGLLAKEFVSACDGGACRLPRTVV 159 (205) T ss_pred CEEeCccceeeCCceEEEeCCCcCchhhcCCCCCCCcceEEEeccccccChhHHHHHHHHHHHHHHhcCCCCccCchhhe Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred hhhhccceEEeeChhhhhcCCCCchhHHHHHHhhhCchhhcCCcccC Q lcl|Aclame:pro 206 TVTRNGVSYQVVNPTDVYATRKTGLPEVDLWLAAVNPSRIPMAPTVR 252 (252) Q Consensus 206 ~~sRqGVt~e~~dp~~i~a~G~TGlpevD~WLaaVNP~~L~~~p~Vr 252 (252) ++||||||| ++||++||++|||||||||+||+|||||+|+|||+|= T Consensus 160 ~~sRqGVT~-~~~~~~i~a~g~TGlpevDlwLatVNP~~L~~~p~V~ 205 (205) T protein:vir:99 160 QTTRQGVTH-VFDATKLLDLGYTGLTEVDTWLAAINPHHLQQAPVVL 205 (205) T ss_pred eeeecceeE-EecCcccccCCcccCchhhhhhhhcCchhhccCcccC Confidence 999999999 7999999999999999999999999999999999999 No 7 >protein:vir:8666 Length: 205 # NCBI annotation: gp24 # Family: family:all:2801 # MgeID: mge:156 # MgeName: Rosebush # Cross-refs: genbank:acc:NP_817785;genbank:gi:29566217;genbank:GeneID:1259475 Probab=100.00 E-value=2.7e-115 Score=648.66 Aligned_cols=205 Identities=46% Similarity=0.880 Sum_probs=198.0 Q ss_pred HHHHHhhCccccccceEEecCCCCCCCcCCCCCcCCCCCcccCCceeeeCCCCCCCcccCCCceEecCCCcCcceEEEeC Q lcl|Aclame:pro 46 DVLWALSGRQFGICPRSVRPCPNGVRNRTVVGLMTGYVLSRFDGRWSQWPCGCGSTCLRSGPKIIHLPGPARSIETVKIG 125 (252) Q Consensus 46 ~vLWalSGRqfG~C~~tvRPC~~~~~~~~~~g~~s~~~~~~~gg~W~n~~CGC~g~C~~~gp~~VhLpGPv~~v~eV~i~ 125 (252) +|||++||||||+|++||||||...+.+. .+.|.|+++.|.||+|+|++|||.++|+++||++|||||||++|+||+|| T Consensus 1 ~vLW~~sGRqfG~c~~tvRPcP~~~g~~~-~~~~~s~~~~~~G~~W~n~~cgc~~~C~~~gp~~V~LpgPv~~V~eV~i~ 79 (205) T protein:vir:86 1 MVLWAFTGRQFGLCETTVRPCPGGGGPRD-MRPWSQPLLWWDGTHWLNASCGCAGRCQVSGPGVVHLPSPAAEVLAVTLG 79 (205) T ss_pred CeeecccCceeecceeeeecCCCCCCCCC-CCccccccccccCcceeeeCCCCccccccCCCceeecCcchheeeeeeEC Confidence 89999999999999999999987555433 34668899999999999999999999999999999999999999999999 Q ss_pred CeeecccceEecCceEEEcCCCCCchhhcCCCCCCCCceEEEeecccccChhHHHHHHHHHHHHHHhCCCCCccCchhhh Q lcl|Aclame:pro 126 GEVLDPAAYTLEGDYLYRTDGGVWPEQDLSVPASAPGGWEVVYRQGNPVPPGVGKFVGQLAAEFFAACNDGKCKLPRNVT 205 (252) Q Consensus 126 G~vldp~~Y~le~~~L~R~~g~~WP~Q~l~~P~gepGTw~VtY~rG~pvP~g~~~lv~~La~e~~~ac~g~~CrLP~~vt 205 (252) |++||||+|++|+|+|||+|+++||||||++|+||||||+|||+||+|||+|+++|+|+|||||++||++++||||+||| T Consensus 80 g~vv~pa~y~~e~n~L~R~~~~~WP~QdL~~p~~EpgT~aVtY~~G~pvP~g~~~~~~~La~e~~~ac~~g~C~LP~~vT 159 (205) T protein:vir:86 80 DTVLDESEYVLEGNALYRRGGKAWPSQDLGRPLGERGTWSVQYLRGLPVPAGGDKMAGLLAKEFVSACDGGACRLPRTVV 159 (205) T ss_pred CEEeCccceeeCCceEEEeCCCcCchhhcCCCCCCCcceEEEeccccccChhHHHHHHHHHHHHHHhcCCCCccCchhhe Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred hhhhccceEEeeChhhhhcCCCCchhHHHHHHhhhCchhhcCCcccC Q lcl|Aclame:pro 206 TVTRNGVSYQVVNPTDVYATRKTGLPEVDLWLAAVNPSRIPMAPTVR 252 (252) Q Consensus 206 ~~sRqGVt~e~~dp~~i~a~G~TGlpevD~WLaaVNP~~L~~~p~Vr 252 (252) ++||||||| ++||++||++|||||||||+||+|||||+|+|||+|= T Consensus 160 ~~sRqGVT~-~~~~~~i~a~g~TGlpevDlwLatVNP~~L~~~p~V~ 205 (205) T protein:vir:86 160 QTTRQGVTH-VFDATKLLDLGYTGLTEVDTWLAAINPHHLQQAPVVL 205 (205) T ss_pred eeeecceeE-EecCcccccCCcccCchhhhhhhhcCchhhccCcccC Confidence 999999999 7999999999999999999999999999999999999 No 8 >protein:vir:8104 Length: 170 # NCBI annotation: gp8 # Family: family:all:3238 # MgeID: mge:152 # MgeName: Che9c # Cross-refs: genbank:acc:NP_817685;genbank:gi:29566116;genbank:GeneID:1259310 Probab=98.29 E-value=8.7e-09 Score=64.78 Aligned_cols=151 Identities=17% Similarity=0.172 Sum_probs=95.8 Q ss_pred CCCCcCCCCCcccCCcee----eeCCCCCC---------CcccCCCceEecCC-CcCcceEEEeCCeeecccceEec--C Q lcl|Aclame:pro 75 VVGLMTGYVLSRFDGRWS----QWPCGCGS---------TCLRSGPKIIHLPG-PARSIETVKIGGEVLDPAAYTLE--G 138 (252) Q Consensus 75 ~~g~~s~~~~~~~gg~W~----n~~CGC~g---------~C~~~gp~~VhLpG-Pv~~v~eV~i~G~vldp~~Y~le--~ 138 (252) +.|..+.....-..=+|. +--||-+= .=.++|=.++.||. ||-||.+|++||+.|+.++|..+ . T Consensus 1 ~~~~~a~~~~~q~~l~aA~a~vR~~cGwhv~P~v~d~t~~ldg~G~~vl~LPt~pvvsV~sV~~~G~~l~~~~~~~~~~~ 80 (170) T protein:vir:81 1 MRGQFADNTEAQAAIDAVLAAARRWCGWHVSPVIIDDVMEVDGPGGRVLSLPTLNLVSVKSVVELGYALDVSTLDRSRRK 80 (170) T ss_pred CcccccCchHHHHHHHHHHHHHHHHhCCcccceecccEEEEeCCCCeeEECCCCcceeeEEEEECCeeecCccceeecCC Confidence 444433322211100011 11244331 12345678899996 99999999999999999988664 5 Q ss_pred ceEEEcCCCCCchhhcCCCCCCCCceEEEeeccc---ccChhHHHHHHHHHHHHHHhCCCCCccCchhhhhhhhccceEE Q lcl|Aclame:pro 139 DYLYRTDGGVWPEQDLSVPASAPGGWEVVYRQGN---PVPPGVGKFVGQLAAEFFAACNDGKCKLPRNVTTVTRNGVSYQ 215 (252) Q Consensus 139 ~~L~R~~g~~WP~Q~l~~P~gepGTw~VtY~rG~---pvP~g~~~lv~~La~e~~~ac~g~~CrLP~~vt~~sRqGVt~e 215 (252) +.|+|..| +||. .++.=.|||++|. |+|.-...++.++|+....+ .++= .+++.+=.+|+|+ T Consensus 81 glL~r~~G-~~~~--------~~~~V~VT~tHGy~~~~apd~~~~vi~~~a~r~~~s--~~~~----~l~~~~~~~vs~~ 145 (170) T protein:vir:81 81 GTLTKPYG-RWTA--------RDGAIVVTATHGFTETEAADWRRAVVQLVGRRAQTS--RPSA----DLKRKKVDDVEYE 145 (170) T ss_pred ceEEecCC-cccc--------ccceEEEEEEeCCCCCccchHHHHHHHHHHHHhhcc--CCcc----cceeeeccceeee Confidence 77888877 5763 2778999999998 67777888888788754431 1221 2444555567888 Q ss_pred eeChhhhhcCCCCchhHHHHHHhhhCchhhcCCc Q lcl|Aclame:pro 216 VVNPTDVYATRKTGLPEVDLWLAAVNPSRIPMAP 249 (252) Q Consensus 216 ~~dp~~i~a~G~TGlpevD~WLaaVNP~~L~~~p 249 (252) .++ .|.+--+ .+|- -.++|+|-..| T Consensus 146 ~~~------~~~s~~~--~~~~-iL~~Yrl~~~p 170 (170) T protein:vir:81 146 WFE------TAVSVDA--ELSA-VFSPFRILPSP 170 (170) T ss_pred ecc------cccccCH--HHHH-hhhhcccCCCC Confidence 654 2333333 2443 67999999999 No 9 >protein:vir:7857 Length: 188 # NCBI annotation: gp14 # Family: family:all:11114 # MgeID: mge:150 # MgeName: CJW1 # Cross-refs: genbank:acc:NP_817464;genbank:gi:29565893;genbank:GeneID:1259086 Probab=97.54 E-value=2.9e-06 Score=50.91 Aligned_cols=169 Identities=24% Similarity=0.340 Sum_probs=100.7 Q ss_pred CeeecCCCCccCCcccCCCcCCCccchhhHHHHHHHHHHHHHHHHHHHHHhhCccccccceEEecCCCCCCCcCCCCCcC Q lcl|Aclame:pro 1 MSCDWPVDTTCLPDVPALPDDATPDQEAEHEASLASRAAAISIARDVLWALSGRQFGICPRSVRPCPNGVRNRTVVGLMT 80 (252) Q Consensus 1 m~c~Wpvd~sc~P~lp~~~d~~~~~~~a~~~~a~a~r~~a~~~A~~vLWalSGRqfG~C~~tvRPC~~~~~~~~~~g~~s 80 (252) |+|.=- |-|-... -+.+..+ |.+.|+...=..-|++|=+=+... T Consensus 1 ~~~~~~-----------la~~~~~---da~~v~l-----AL~~As~~VR~~~g~~i~~V~~dt----------------- 44 (188) T protein:vir:78 1 MTFAQQ-----------LADAFPE---DADDAAT-----ALSWAKSQVEGYCGRKFDLVEDDV----------------- 44 (188) T ss_pred Cchhhh-----------HHHhcCC---CcchHHH-----HHHHHHHHHHHHhCCcceeeeeee----------------- Confidence 444211 1111100 0112222 344555554444444443211110 Q ss_pred CCCCcccCCceeeeCCCCCCCcccCCCceEecCC----CcCcceEEEeCCeeeccc---ceEecCceE----EE------ Q lcl|Aclame:pro 81 GYVLSRFDGRWSQWPCGCGSTCLRSGPKIIHLPG----PARSIETVKIGGEVLDPA---AYTLEGDYL----YR------ 143 (252) Q Consensus 81 ~~~~~~~gg~W~n~~CGC~g~C~~~gp~~VhLpG----Pv~~v~eV~i~G~vldp~---~Y~le~~~L----~R------ 143 (252) .++.|-|++ . .||| ||.+|..++++|+-++-- .|.+.++.+ +| T Consensus 45 -----------~~id~~Gg~------~---~LP~~Pvv~i~~Ve~~~~~G~~~~~v~~r~y~~~g~~~~l~~trg~pg~~ 104 (188) T protein:vir:78 45 -----------AIVDPYCGS------S---LLPSIPVVEISKVEGYLPTGNGMDWVELTNYWFKRDTGLIFDTTGLPGSE 104 (188) T ss_pred -----------eeeecCCCc------e---eeccCcceeeeEEEEEeeCCcccccccccccccccceeeecccccCcccc Confidence 122222211 1 5676 555555557788876554 455666555 33 Q ss_pred -cCCCCCchhhcCCCCCCCCceEEEeeccc-ccChhHHHHHHHHHHHHHHhCCCCCccCchhhhhhhhccceEEeeChhh Q lcl|Aclame:pro 144 -TDGGVWPEQDLSVPASAPGGWEVVYRQGN-PVPPGVGKFVGQLAAEFFAACNDGKCKLPRNVTTVTRNGVSYQVVNPTD 221 (252) Q Consensus 144 -~~g~~WP~Q~l~~P~gepGTw~VtY~rG~-pvP~g~~~lv~~La~e~~~ac~g~~CrLP~~vt~~sRqGVt~e~~dp~~ 221 (252) +.+.+|| =.||.-+|||++|+ +||.-+..++=.+|++++.. |.+.++.+=-..|..++ T Consensus 105 ~~r~~~WP--------w~p~~VtVTytHGy~evP~eiv~lv~d~A~~~~~n--------p~~L~q~~vG~~S~tfa---- 164 (188) T protein:vir:78 105 WSTGHTWP--------WLPGSLRVTYTHGYNPVPDELIDVAIRLAREYQSN--------PELLVSKQVGEIERRFG---- 164 (188) T ss_pred cccccccc--------cCcceEEEEEecCCCcccHHHHHHHHHHHHHHhcC--------cccceeeecCceeeecc---- Confidence 2344698 45789999999999 89999999999999988765 88888887777777644 Q ss_pred hhcCCCCchhHHHHHHhhhCchhhcCCc Q lcl|Aclame:pro 222 VYATRKTGLPEVDLWLAAVNPSRIPMAP 249 (252) Q Consensus 222 i~a~G~TGlpevD~WLaaVNP~~L~~~p 249 (252) +.|.++|.++|. .-+|+|.|+... T Consensus 165 --~~~~~sl~~~~~--~il~ry~l~~~~ 188 (188) T protein:vir:78 165 --SVAGTSLSKADQ--AILDRYVIATLA 188 (188) T ss_pred --cccCCcccchhH--HhhccccccccC Confidence 267788999986 557999998877 No 10 >protein:vir:101652 Length: 188 # NCBI annotation: gp15 # Family: family:all:11114 # MgeID: mge:1515 # MgeName: 244 # Cross-refs: genbank:acc:YP_654770;genbank:gi:109302768;genbank:GeneID:4156086 Probab=97.54 E-value=2.9e-06 Score=50.91 Aligned_cols=169 Identities=24% Similarity=0.340 Sum_probs=100.7 Q ss_pred CeeecCCCCccCCcccCCCcCCCccchhhHHHHHHHHHHHHHHHHHHHHHhhCccccccceEEecCCCCCCCcCCCCCcC Q lcl|Aclame:pro 1 MSCDWPVDTTCLPDVPALPDDATPDQEAEHEASLASRAAAISIARDVLWALSGRQFGICPRSVRPCPNGVRNRTVVGLMT 80 (252) Q Consensus 1 m~c~Wpvd~sc~P~lp~~~d~~~~~~~a~~~~a~a~r~~a~~~A~~vLWalSGRqfG~C~~tvRPC~~~~~~~~~~g~~s 80 (252) |+|.=- |-|-... -+.+..+ |.+.|+...=..-|++|=+=+... T Consensus 1 ~~~~~~-----------la~~~~~---da~~v~l-----AL~~As~~VR~~~g~~i~~V~~dt----------------- 44 (188) T protein:vir:10 1 MTFAQQ-----------LADAFPE---DADDAAT-----ALSWAKSQVEGYCGRKFDLVEDDV----------------- 44 (188) T ss_pred Cchhhh-----------HHHhcCC---CcchHHH-----HHHHHHHHHHHHhCCcceeeeeee----------------- Confidence 444211 1111100 0112222 344555554444444443211110 Q ss_pred CCCCcccCCceeeeCCCCCCCcccCCCceEecCC----CcCcceEEEeCCeeeccc---ceEecCceE----EE------ Q lcl|Aclame:pro 81 GYVLSRFDGRWSQWPCGCGSTCLRSGPKIIHLPG----PARSIETVKIGGEVLDPA---AYTLEGDYL----YR------ 143 (252) Q Consensus 81 ~~~~~~~gg~W~n~~CGC~g~C~~~gp~~VhLpG----Pv~~v~eV~i~G~vldp~---~Y~le~~~L----~R------ 143 (252) .++.|-|++ . .||| ||.+|..++++|+-++-- .|.+.++.+ +| T Consensus 45 -----------~~id~~Gg~------~---~LP~~Pvv~i~~Ve~~~~~G~~~~~v~~r~y~~~g~~~~l~~trg~pg~~ 104 (188) T protein:vir:10 45 -----------AIVDPYCGS------S---LLPSIPVVEISKVEGYLPTGNGMDWVELTNYWFKRDTGLIFDTTGLPGSE 104 (188) T ss_pred -----------eeeecCCCc------e---eeccCcceeeeEEEEEeeCCcccccccccccccccceeeecccccCcccc Confidence 122222211 1 5676 555555557788876554 455666555 33 Q ss_pred -cCCCCCchhhcCCCCCCCCceEEEeeccc-ccChhHHHHHHHHHHHHHHhCCCCCccCchhhhhhhhccceEEeeChhh Q lcl|Aclame:pro 144 -TDGGVWPEQDLSVPASAPGGWEVVYRQGN-PVPPGVGKFVGQLAAEFFAACNDGKCKLPRNVTTVTRNGVSYQVVNPTD 221 (252) Q Consensus 144 -~~g~~WP~Q~l~~P~gepGTw~VtY~rG~-pvP~g~~~lv~~La~e~~~ac~g~~CrLP~~vt~~sRqGVt~e~~dp~~ 221 (252) +.+.+|| =.||.-+|||++|+ +||.-+..++=.+|++++.. |.+.++.+=-..|..++ T Consensus 105 ~~r~~~WP--------w~p~~VtVTytHGy~evP~eiv~lv~d~A~~~~~n--------p~~L~q~~vG~~S~tfa---- 164 (188) T protein:vir:10 105 WSTGHTWP--------WLPGSLRVTYTHGYNPVPDELIDVAIRLAREYQSN--------PELLVSKQVGEIERRFG---- 164 (188) T ss_pred cccccccc--------cCcceEEEEEecCCCcccHHHHHHHHHHHHHHhcC--------cccceeeecCceeeecc---- Confidence 2344698 45789999999999 89999999999999988765 88888887777777644 Q ss_pred hhcCCCCchhHHHHHHhhhCchhhcCCc Q lcl|Aclame:pro 222 VYATRKTGLPEVDLWLAAVNPSRIPMAP 249 (252) Q Consensus 222 i~a~G~TGlpevD~WLaaVNP~~L~~~p 249 (252) +.|.++|.++|. .-+|+|.|+... T Consensus 165 --~~~~~sl~~~~~--~il~ry~l~~~~ 188 (188) T protein:vir:10 165 --SVAGTSLSKADQ--AILDRYVIATLA 188 (188) T ss_pred --cccCCcccchhH--HhhccccccccC Confidence 267788999986 557999998877 No 11 >protein:vir:1435 Length: 188 # NCBI annotation: hypothetical protein # Family: family:all:501 # MgeID: mge:30 # MgeName: phiE125 # Cross-refs: genbank:acc:NP_536364;genbank:gi:17975169;genbank:GeneID:929149 Probab=97.35 E-value=6.5e-05 Score=43.54 Aligned_cols=166 Identities=20% Similarity=0.280 Sum_probs=87.5 Q ss_pred Ce---eecC-----CCCccCCcccCCCcCCCccchhhHHHHHHHHHHHHHHHHHHHHHhhCccccccceEEecCCCCCCC Q lcl|Aclame:pro 1 MS---CDWP-----VDTTCLPDVPALPDDATPDQEAEHEASLASRAAAISIARDVLWALSGRQFGICPRSVRPCPNGVRN 72 (252) Q Consensus 1 m~---c~Wp-----vd~sc~P~lp~~~d~~~~~~~a~~~~a~a~r~~a~~~A~~vLWalSGRqfG~C~~tvRPC~~~~~~ 72 (252) |+ -+=| |.-.-+-.-..+.++ +.+..+.. .-.+.|++.+=..+||-+..-...++= T Consensus 1 m~~~~~~~ppa~epVtLae~K~~lrid~~-------~eD~~l~~--~li~aA~~~~E~~tgr~l~~qt~~~~~------- 64 (188) T protein:vir:14 1 MAAVLVEYLDDAEPLTFEEVAFQCRIDDD-------DERDFVER--VVIPGARQAAESKAGAAIRKARYVEHL------- 64 (188) T ss_pred CCceeeecCCCCCccCHHHHHHHcCCCCc-------hhHHHHHH--HHHHHHHHHHHHHhCCeeeeeeEEEEe------- Confidence 21 0000 000000000001100 11112211 111234444446788877653333220 Q ss_pred cCCCCCcCCCCCcccCCceeeeCCCCCCCcccCCCceEecC-CCcCcceEEEe---CC--eeecccceEecC----ceEE Q lcl|Aclame:pro 73 RTVVGLMTGYVLSRFDGRWSQWPCGCGSTCLRSGPKIIHLP-GPARSIETVKI---GG--EVLDPAAYTLEG----DYLY 142 (252) Q Consensus 73 ~~~~g~~s~~~~~~~gg~W~n~~CGC~g~C~~~gp~~VhLp-GPv~~v~eV~i---~G--~vldp~~Y~le~----~~L~ 142 (252) ..|. ...+.|| +||.+|++|++ +| +.||++.|+|+. .+|+ T Consensus 65 ----------------~~~~--------------~~~~~Lp~~Pv~sV~sV~~~d~~g~~~~l~~~~y~l~~~~~~~~l~ 114 (188) T protein:vir:14 65 ----------------SGFP--------------PAEVPLSVGQVISVDSIEIRDASGATTTLDAGAFELVQLGRETLLV 114 (188) T ss_pred ----------------cCcC--------------CCceEecccCcceeeEEEEEcCCCceEeecccceEEeecCCCcEEE Confidence 0000 0127799 99999999988 44 478999999963 4677 Q ss_pred EcCCCCCchhhcCCCCCCCCceEEEeecccc--cChhHHHHHHHHHHHHHHhCCCCCccCchhhhhhhhccceEEeeChh Q lcl|Aclame:pro 143 RTDGGVWPEQDLSVPASAPGGWEVVYRQGNP--VPPGVGKFVGQLAAEFFAACNDGKCKLPRNVTTVTRNGVSYQVVNPT 220 (252) Q Consensus 143 R~~g~~WP~Q~l~~P~gepGTw~VtY~rG~p--vP~g~~~lv~~La~e~~~ac~g~~CrLP~~vt~~sRqGVt~e~~dp~ 220 (252) ..++..||. .+...|+|+-|.+ ||+.+..++=+++.++.+. |..|+. T Consensus 115 ~~~~~~~p~---------~~~V~V~~~AG~~~~vP~~ik~Aill~va~~Y~~----------------Re~~~~------ 163 (188) T protein:vir:14 115 PAGQARWPY---------ARAVTIKYQAGIDLARYPSVRSWMLLAAAWAYDH----------------RELYSD------ 163 (188) T ss_pred EecCCCCCC---------CceEEEEEEecCccCchHHHHHHHHHHHHHHHhc----------------cccccc------ Confidence 788888882 2569999999975 8888888888888888763 222211 Q ss_pred hhhcCCCCchhH--HHHHHhhhCchhhcCCccc Q lcl|Aclame:pro 221 DVYATRKTGLPE--VDLWLAAVNPSRIPMAPTV 251 (252) Q Consensus 221 ~i~a~G~TGlpe--vD~WLaaVNP~~L~~~p~V 251 (252) +...+-||. +| +-.+|||+ ||.. T Consensus 164 ---g~~~~~lP~~~v~---~Ll~pyRv--P~~~ 188 (188) T protein:vir:14 164 ---GQPMGEMPGGYSD---VLLNPITV--PPRF 188 (188) T ss_pred ---ccccccccHHHHH---HHhhccCC--CCCC Confidence 222233443 44 34456665 3333 No 12 >protein:vir:81255 Length: 180 # NCBI annotation: gp8 # Family: family:all:3238 # MgeID: mge:1893 # MgeName: BFK20 # Cross-refs: genbank:acc:YP_001456738;genbank:gi:157168381;uniprot:Q9MBJ7;genbank:GeneID:5580378 Probab=96.90 E-value=0.00011 Score=42.25 Aligned_cols=174 Identities=16% Similarity=0.104 Sum_probs=92.4 Q ss_pred CCCccCCcccCCCcCCCccchhhHHHHHHHHHHHHHHHHHHHHHhhCccccc-cceEEecCCCCCCCcCCCCCcCCCCCc Q lcl|Aclame:pro 7 VDTTCLPDVPALPDDATPDQEAEHEASLASRAAAISIARDVLWALSGRQFGI-CPRSVRPCPNGVRNRTVVGLMTGYVLS 85 (252) Q Consensus 7 vd~sc~P~lp~~~d~~~~~~~a~~~~a~a~r~~a~~~A~~vLWalSGRqfG~-C~~tvRPC~~~~~~~~~~g~~s~~~~~ 85 (252) ++ +|.+.-.-+..+-.-.-..+...+ ..+.+.|+.-.=.+-||.+=+ =+.|+ . T Consensus 1 ~~---~p~~l~p~~~~~~~~g~~~~~~~~--q~~l~aA~aavRr~cGwhv~pv~~~t~-------------------~-- 54 (180) T protein:vir:81 1 MQ---PPHGLTPEILRTYPGGHLLSKDLT--QEHVDAVVATVRKLCGWHVFPVATTEY-------------------S-- 54 (180) T ss_pred CC---CCccCCcchhhhhhccccCCchhh--HHHHHHHHHHHHHHhCCcccceeeeEE-------------------E-- Confidence 22 232222111111000000001111 122234444333334433210 00000 0 Q ss_pred ccCCceeeeCCCCCCCcccCCCceEecCC-CcCcceEEEeCCeeeccc--ceEe--cCceEEEcCCCCCchhhcCCCCCC Q lcl|Aclame:pro 86 RFDGRWSQWPCGCGSTCLRSGPKIIHLPG-PARSIETVKIGGEVLDPA--AYTL--EGDYLYRTDGGVWPEQDLSVPASA 160 (252) Q Consensus 86 ~~gg~W~n~~CGC~g~C~~~gp~~VhLpG-Pv~~v~eV~i~G~vldp~--~Y~l--e~~~L~R~~g~~WP~Q~l~~P~ge 160 (252) . .++|=.++.||. ||-||.+|++||..||.+ +|.- +.+.|+|+-| +|+. | T Consensus 55 ------l----------dg~G~~~l~LPt~~vvsV~sV~~dG~~v~~~~~~~~~~~~~G~l~r~~G-~~~r-------g- 109 (180) T protein:vir:81 55 ------F----------PWRGDPEFLVPTKRLVSVESVTCGDLSIPNEDIVFYPYGEVNLLRRVHG-TPWR-------V- 109 (180) T ss_pred ------E----------ecCCCeeEeCCCCcceeeeeEEECCeeeCCccceecccCCCCeeEecCC-cccc-------c- Confidence 0 123446788996 999999999999999987 4555 4588888888 4652 2 Q ss_pred CCceEEEeecccccChhHHHHHHHHHHHHHHhCCCCCccCchhhhhhhhccceEEeeChhhhhcCCCCchhHHHHHHhhh Q lcl|Aclame:pro 161 PGGWEVVYRQGNPVPPGVGKFVGQLAAEFFAACNDGKCKLPRNVTTVTRNGVSYQVVNPTDVYATRKTGLPEVDLWLAAV 240 (252) Q Consensus 161 pGTw~VtY~rG~pvP~g~~~lv~~La~e~~~ac~g~~CrLP~~vt~~sRqGVt~e~~dp~~i~a~G~TGlpevD~WLaaV 240 (252) .+.=+|||++|.+.-|+...++.+.|.. ++... ...+++.|=.|++|- +. +|.+---.+.+.+ T Consensus 110 ~~~V~Vt~~hGye~vP~~~aVi~~~a~r---a~~s~----~~~v~~~tvG~~S~~--------~~--~~~~~~~~e~aiL 172 (180) T protein:vir:81 110 ARPMTVTMTHGYEDAPGLVGVIAQMLTR---AFTST----GGGDGNLTVGNMSYG--------LS--TGITPKSSEWLII 172 (180) T ss_pred cceEEEEEEeCCCCCchHHHHHHHHHHH---hcccc----ccccccceecceeec--------cc--cCCCccHHHHHHH Confidence 4678999999998777665444333322 22211 125677777787762 12 3333333457889 Q ss_pred CchhhcCC Q lcl|Aclame:pro 241 NPSRIPMA 248 (252) Q Consensus 241 NP~~L~~~ 248 (252) |.|||.-. T Consensus 173 drYrl~~~ 180 (180) T protein:vir:81 173 DQYRLHPV 180 (180) T ss_pred HhhhccCC Confidence 99999877 No 13 >protein:vir:80320 Length: 188 # NCBI annotation: gp8, conserved hypothetical protein # Family: family:all:501 # MgeID: mge:1881 # MgeName: phi644-2 # Cross-refs: genbank:acc:YP_001111087;genbank:gi:134288682;genbank:GeneID:4960567 Probab=96.72 E-value=0.0002 Score=40.81 Aligned_cols=166 Identities=20% Similarity=0.250 Sum_probs=83.5 Q ss_pred Ce---eecC-CCC----ccCCcccCCCcCCCccchhhHHHHHHHHHHHHHHHHHHHHHhhCccccccceEEecCCCCCCC Q lcl|Aclame:pro 1 MS---CDWP-VDT----TCLPDVPALPDDATPDQEAEHEASLASRAAAISIARDVLWALSGRQFGICPRSVRPCPNGVRN 72 (252) Q Consensus 1 m~---c~Wp-vd~----sc~P~lp~~~d~~~~~~~a~~~~a~a~r~~a~~~A~~vLWalSGRqfG~C~~tvRPC~~~~~~ 72 (252) |+ -+=| ..+ .-+-+-..+.++ +.+..+.. .-.+.|++.+=..+||-+..-...++= T Consensus 1 M~~~~~~~ppa~ePVtL~e~K~hLRid~~-------~eD~~l~~--~lI~aA~~~~E~~~gr~l~~qt~~~~~------- 64 (188) T protein:vir:80 1 MAAVLVEYLDDAEPLTFEEVAFQCRIDDD-------DERDFVER--IVIPGARQAAESKSGAAIRKARYVERL------- 64 (188) T ss_pred CCceeeccCCCCcccCHHHHHHHcCCCCc-------hhhHHHHH--HHHHHHHHHHHHHhCCeeeeeeEEEEe------- Confidence 21 1100 000 000000001100 11122211 011234444435677766543332220 Q ss_pred cCCCCCcCCCCCcccCCceeeeCCCCCCCcccCCCceEecC-CCcCcceEEEe---CC--eeecccceEecC----ceEE Q lcl|Aclame:pro 73 RTVVGLMTGYVLSRFDGRWSQWPCGCGSTCLRSGPKIIHLP-GPARSIETVKI---GG--EVLDPAAYTLEG----DYLY 142 (252) Q Consensus 73 ~~~~g~~s~~~~~~~gg~W~n~~CGC~g~C~~~gp~~VhLp-GPv~~v~eV~i---~G--~vldp~~Y~le~----~~L~ 142 (252) +.| ++ ..+.|| +||.+|++|++ +| +.|++++|+++. .+|+ T Consensus 65 ----------------~~~-----~~---------~~i~Lp~~PV~sV~sV~~~d~~G~~~~l~~~~y~l~~~~~~~~l~ 114 (188) T protein:vir:80 65 ----------------SGF-----PL---------AEISLSVGQVIRVDSIEIRDASGATTTLDADAFELVQLGREALLV 114 (188) T ss_pred ----------------cCC-----CC---------CceEecccccceeeEEEEEcCCCcEEeecccceEEeecCCCcEEE Confidence 000 01 127799 99999999998 66 478999999953 4688 Q ss_pred EcCCCCCchhhcCCCCCCCCceEEEeeccc--ccChhHHHHHHHHHHHHHHhCCCCCccCchhhhhhhhccceEEeeChh Q lcl|Aclame:pro 143 RTDGGVWPEQDLSVPASAPGGWEVVYRQGN--PVPPGVGKFVGQLAAEFFAACNDGKCKLPRNVTTVTRNGVSYQVVNPT 220 (252) Q Consensus 143 R~~g~~WP~Q~l~~P~gepGTw~VtY~rG~--pvP~g~~~lv~~La~e~~~ac~g~~CrLP~~vt~~sRqGVt~e~~dp~ 220 (252) .+.+..||. .+-..|+|+=|. .||+.+..++=+|+.++.+.=+ -+.. T Consensus 115 ~~~~~~~p~---------~~~V~V~~~AG~~~~vP~~ik~aill~va~~Ye~Re----------------~~~~------ 163 (188) T protein:vir:80 115 PEGQARWPF---------ARAVTITYQAGVDLARYPSVRTWMLLAAAWAYDHRE----------------LFSE------ 163 (188) T ss_pred EecCCCCCC---------CceEEEEEEecccccChHHHHHHHHHHHHHHHhccc----------------cccc------ Confidence 888888883 235899999886 6788888888888888876321 1111 Q ss_pred hhhcCCCCchhH--HHHHHhhhCchhhcCCccc Q lcl|Aclame:pro 221 DVYATRKTGLPE--VDLWLAAVNPSRIPMAPTV 251 (252) Q Consensus 221 ~i~a~G~TGlpe--vD~WLaaVNP~~L~~~p~V 251 (252) +..-+.||. +| +-.+|||+ ||.. T Consensus 164 ---g~~~~~~P~~~v~---~Ll~pyRv--p~~~ 188 (188) T protein:vir:80 164 ---GQPIGEMPGGYAD---VLLNPITV--PPRF 188 (188) T ss_pred ---ccccccccHHHHH---HHhhccCC--CCCC Confidence 111222331 33 23345544 2222 No 14 >protein:vir:8326 Length: 201 # NCBI annotation: gp43 # Family: family:all:3238 # MgeID: mge:154 # MgeName: Corndog # Cross-refs: genbank:acc:NP_817894;genbank:gi:29566327;genbank:GeneID:1259522 Probab=92.04 E-value=0.007 Score=32.41 Aligned_cols=157 Identities=17% Similarity=0.197 Sum_probs=82.6 Q ss_pred CCcCCCCCcCC---CCCcccCCc------eeee----CCCCC---------CCcccCCCceEecC-CCcCcceEEEeCCe Q lcl|Aclame:pro 71 RNRTVVGLMTG---YVLSRFDGR------WSQW----PCGCG---------STCLRSGPKIIHLP-GPARSIETVKIGGE 127 (252) Q Consensus 71 ~~~~~~g~~s~---~~~~~~gg~------W~n~----~CGC~---------g~C~~~gp~~VhLp-GPv~~v~eV~i~G~ 127 (252) |....+..... ..+...+|. |... .||-+ -.+-.+|-.++.|| =++-+|.+|++||+ T Consensus 1 m~eL~P~dl~~~~~g~l~a~d~~~Q~aLdAA~aavRr~CGWHV~Pvv~dd~v~ldg~G~~vL~LPT~rLvsV~SVte~G~ 80 (201) T protein:vir:83 1 MAELSEADVESFTRGRLLANDGETKKMLDAALLTARRYCGWKVTPVVTDDVMVLDGPDSRILNLPTRKLVTLSELFERGN 80 (201) T ss_pred CccccchhcchhhcCccccCChHHHHHHHHHHHHHHHHhCccceeeeeeeeEEEcCCCCeeEEcCCcccceeEEEeeCCE Confidence 33333322211 112111211 1111 26621 14667789999999 89999999999999 Q ss_pred eecccceEe--cC-------ceEEEcCCCCCchhhcCCCCCCCCceEEEeecccccChh-HHHHHHHHHH-HHHHhCCCC Q lcl|Aclame:pro 128 VLDPAAYTL--EG-------DYLYRTDGGVWPEQDLSVPASAPGGWEVVYRQGNPVPPG-VGKFVGQLAA-EFFAACNDG 196 (252) Q Consensus 128 vldp~~Y~l--e~-------~~L~R~~g~~WP~Q~l~~P~gepGTw~VtY~rG~pvP~g-~~~lv~~La~-e~~~ac~g~ 196 (252) .|+-+.++. .| ..|+|+....||+ |+=+.=.|||++|..=+|+ ...++=..|- .+...-+.| T Consensus 81 ~i~~~~~~~s~~G~~~~~~~~~ll~~r~gg~w~-------~~~~~V~VT~tHGy~~~pa~d~~~vv~~a~~~~~q~~~tG 153 (201) T protein:vir:83 81 PVDLSKVRWSAGGPPGSSSRPIAVRKRNGGWWT-------GEYQGIEVKMTHGYTEDEAADWRLAVLSMVDQMSQTLASG 153 (201) T ss_pred eccCCceeeecCCcccccccccceeeecCcCCc-------CccceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhhhcc Confidence 999886654 11 2233333233663 4445579999999865554 4443333332 222223333 Q ss_pred CccCchhhhhhhhccceEEeeChhh------hhcC----CCCchhHHHHH Q lcl|Aclame:pro 197 KCKLPRNVTTVTRNGVSYQVVNPTD------VYAT----RKTGLPEVDLW 236 (252) Q Consensus 197 ~CrLP~~vt~~sRqGVt~e~~dp~~------i~a~----G~TGlpevD~W 236 (252) .=-.| .+..+=-+|+||-+||-. +|.. -.+-||-|+.- T Consensus 154 ~~s~~--l~~~~v~~v~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (201) T protein:vir:83 154 RGELD--LLSKKVDDVTYRWGDPYADSAQQALFSVTSVFDNFTLPCVEFL 201 (201) T ss_pred ccccc--ceeeeeeccchhhccccchhHHHHHHHHHHHHhccccchhhcC Confidence 33333 344455799999998743 1110 11234444322 No 15 >protein:vir:3160 Length: 198 # NCBI annotation: unknown # Family: family:all:28414 # MgeID: mge:316 # MgeName: PhiCh1 # Cross-refs: genbank:acc:NP_665931;genbank:gi:22091117;genbank:GeneID:951344 Probab=80.10 E-value=0.098 Score=26.11 Aligned_cols=176 Identities=19% Similarity=0.192 Sum_probs=90.3 Q ss_pred ccCCCcCCCccchhhHHHH-----------HHHHHHHHHHHHHHHHHhhCccccccceEEecCCCCCCCcCCCCCcCCCC Q lcl|Aclame:pro 15 VPALPDDATPDQEAEHEAS-----------LASRAAAISIARDVLWALSGRQFGICPRSVRPCPNGVRNRTVVGLMTGYV 83 (252) Q Consensus 15 lp~~~d~~~~~~~a~~~~a-----------~a~r~~a~~~A~~vLWalSGRqfG~C~~tvRPC~~~~~~~~~~g~~s~~~ 83 (252) .|.++.+-.++-+ .+++ .++.- ...|++..=+.+||-+=.=.+|. -+ T Consensus 1 ~~~~~~~~~~~~~--~dKk~Lgv~~d~~D~~le~L--Ia~ASa~~E~~~Gr~L~a~d~t~------------------d~ 58 (198) T protein:vir:31 1 MPLEPSDVESELP--FDAKAFGWSEEKFKSELETY--IAAATETVEKWINTTLEPETVTR------------------DL 58 (198) T ss_pred CCCCcccccccCc--hhhHhhcccccchhhHHHHH--HHHHHHHHHHhhCcEecccccee------------------cc Confidence 3333333322111 1111 11111 12455555556666542111110 00 Q ss_pred CcccCCceeeeCCCCCCCcccCCCceEecC-CCcCcceEEEeC-----CeeecccceEecC-ceEEEcCCCCCchhhcCC Q lcl|Aclame:pro 84 LSRFDGRWSQWPCGCGSTCLRSGPKIIHLP-GPARSIETVKIG-----GEVLDPAAYTLEG-DYLYRTDGGVWPEQDLSV 156 (252) Q Consensus 84 ~~~~gg~W~n~~CGC~g~C~~~gp~~VhLp-GPv~~v~eV~i~-----G~vldp~~Y~le~-~~L~R~~g~~WP~Q~l~~ 156 (252) .... .+|=....|| -||-+|++|+|| |..++.-.|-|+- ..++..+. .|++ T Consensus 59 ~r~~----------------G~g~~~L~LPq~PV~sVsSV~iD~~~~~g~~v~~~dy~l~~~~~~~~~G~-~r~~----- 116 (198) T protein:vir:31 59 SRPS----------------HVDGHDLPMPSRPVQDVVSVTIDTDRAMGRDVDEDDYWVEETHLELKPGA-DRKS----- 116 (198) T ss_pred Cccc----------------CCCcceeecCCCCcceeEEEEEecCccccccccchhhhhhhhhhhhcccc-cccc----- Confidence 1111 1133445788 999999999999 6666666666543 33333332 3332 Q ss_pred CCCCCCceEEEeeccc-ccChhHHHHHHHHHHHHHHhCCCCCccCchhhhhhhhccceEEeeChhh--hhcCCCC-chhH Q lcl|Aclame:pro 157 PASAPGGWEVVYRQGN-PVPPGVGKFVGQLAAEFFAACNDGKCKLPRNVTTVTRNGVSYQVVNPTD--VYATRKT-GLPE 232 (252) Q Consensus 157 P~gepGTw~VtY~rG~-pvP~g~~~lv~~La~e~~~ac~g~~CrLP~~vt~~sRqGVt~e~~dp~~--i~a~G~T-Glpe 232 (252) =+.+.-.-+|+|+.|. +||+-+.+++=.|+...+++=... -+++.|=+|=+|. |+|.+ +.++.|- -=.| T Consensus 117 ~p~~~rnV~V~y~AGye~VPeDikeAVI~lv~~~~~e~~~~------Gi~s~T~~gesvS-y~~~~e~~~~~~~~~~~~~ 189 (198) T protein:vir:31 117 WPTDRRCITVEWEYGYEEVPESPKKAIIRLVRARLRAINAE------GISSDTIMGDSIS-YDPEDEVVLAARKDVAGFE 189 (198) T ss_pred cccccceEEEEeecCccccchHHHHHHHHHHHHHHhhhhcc------cceeeeecCccee-ecCcccchhhhhhhhcccc Confidence 1123336789999997 699999999999999999876654 2778888887776 55432 2222221 0011 Q ss_pred HHHHHhhhC Q lcl|Aclame:pro 233 VDLWLAAVN 241 (252) Q Consensus 233 vD~WLaaVN 241 (252) .--...-|. T Consensus 190 ~~~~~~~~~ 198 (198) T protein:vir:31 190 APSYYGGVE 198 (198) T ss_pred CcccccCCC Confidence 111111111 No 16 >protein:vir:8430 Length: 189 # NCBI annotation: gp25 # Family: family:all:3238 # MgeID: mge:155 # MgeName: Omega # Cross-refs: genbank:acc:NP_818326;genbank:gi:29566762;genbank:GeneID:1260021 Probab=77.58 E-value=0.12 Score=25.57 Aligned_cols=165 Identities=19% Similarity=0.173 Sum_probs=85.0 Q ss_pred HHHHHHHHHHHHhhCccccccceEEecCCCCCCCcCCCCCcCCCCCcccCCc------eeee----CCCCCC-------- Q lcl|Aclame:pro 39 AAISIARDVLWALSGRQFGICPRSVRPCPNGVRNRTVVGLMTGYVLSRFDGR------WSQW----PCGCGS-------- 100 (252) Q Consensus 39 ~a~~~A~~vLWalSGRqfG~C~~tvRPC~~~~~~~~~~g~~s~~~~~~~gg~------W~n~----~CGC~g-------- 100 (252) +||+|+-+. +++=.+ ..+...+|. |... .||=+= T Consensus 1 ~~~el~p~~---------------~~~~~~-------------g~l~Add~~~q~aLdAA~a~vRr~CGWHV~PV~~dtv 52 (189) T protein:vir:84 1 MAEELTPED---------------VDTYTQ-------------GRIDKDDPETARALAAALSRARRACGWHVTPVVESTV 52 (189) T ss_pred Ccccccchh---------------cchhhc-------------ceeccCChhHHHHHHHHHHHHHHhhCCcccceeeeeE Confidence 222222111 111111 111111100 1000 133210 Q ss_pred CcccCCCceEecC-CCcCcceEEEeCCeeecccc--eEe-cCceEEEcCCCCCchhhcCCCCCCCCceEEEeecccc-cC Q lcl|Aclame:pro 101 TCLRSGPKIIHLP-GPARSIETVKIGGEVLDPAA--YTL-EGDYLYRTDGGVWPEQDLSVPASAPGGWEVVYRQGNP-VP 175 (252) Q Consensus 101 ~C~~~gp~~VhLp-GPv~~v~eV~i~G~vldp~~--Y~l-e~~~L~R~~g~~WP~Q~l~~P~gepGTw~VtY~rG~p-vP 175 (252) .=-+.|=.++.|| =++-+|.+|++||+.++-.. |.- +.+.|+|..| .||. |+=+|||++|.+ +| T Consensus 53 ~vdg~G~svL~LPTlrlvsV~sVt~dG~~~~~~~v~~~~~~~Gll~r~~G-w~~~----------g~I~VT~tHGy~~~p 121 (189) T protein:vir:84 53 RLHGSGHDFIVLPTLKPVELLSITEDGEEVDLDEVYFVSREPGVLYKKCG-WWCR----------GPIEVTLTHGFTAEE 121 (189) T ss_pred EEcCCCCceEecCCccceeeeeeeecCeecccccceeccCCcceeEeCCC-cccC----------CeEEEEEEcCCCCCC Confidence 1123445788999 79999999999999999997 655 4577887777 5762 578999999995 66 Q ss_pred h-hHHHHHHHHHHHHHHhCCCCCccCchhhhhhhhccceEEeeChhhhhcCCCCchhHHHHHHhhhCchhhcCCc Q lcl|Aclame:pro 176 P-GVGKFVGQLAAEFFAACNDGKCKLPRNVTTVTRNGVSYQVVNPTDVYATRKTGLPEVDLWLAAVNPSRIPMAP 249 (252) Q Consensus 176 ~-g~~~lv~~La~e~~~ac~g~~CrLP~~vt~~sRqGVt~e~~dp~~i~a~G~TGlpevD~WLaaVNP~~L~~~p 249 (252) + .+..++..+|...-..- +.+--.| .|+..=--|+|+.+.-.. -.-++.-=++.|.-|.+ +||..-. T Consensus 122 a~di~~vv~~mA~rA~~~~-~~~~~g~--~~~~~v~dv~~r~~~~~~-~~~~~~~~~~l~~~~~~---~~~~~~~ 189 (189) T protein:vir:84 122 AGDFREVVLQAVDVANLMV-GTGATGP--ITGLEVDDVNMRWSGLVD-RSWGIAKNPMLESVLYQ---YRLVAIA 189 (189) T ss_pred chhHHHHHHHHHHhhhccC-CCccccc--ccceeecceeeehhhhcc-cccccccchHHHHHHhh---hhhhccC Confidence 4 67777777775441111 1112222 233333456666443111 01244455666666654 3333222 Done!