Query lcl|Aclame:protein:vir:102080|NCBI_annot:portal protein|genbank:acc:YP_512313;genbank:gi:89152482;genbank:GeneID:3953073 Match_columns 429 No_of_seqs 125 out of 1117 Neff 9.9 Searched_HMMs 1612 Date Sun Dec 1 12:54:36 2013 Command /home/guerois/workspace/virfam/python/lib/hhsearch//hhsearch2 -i .//seq/seq_44 -d /home/guerois/workspace/virfam/python/profile_database/capsid_neck_tail.hhm -glob -cpu 7 -o .//seq/HHR/seq_44_vs_rec_db.hhr No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM 1 protein:vir:102080 Length: 429 100.0 2E-113 1E-116 638.3 46.6 429 1-429 1-429 (429) 2 protein:vir:107605 Length: 432 100.0 1E-111 8E-115 628.6 46.6 429 1-429 1-432 (432) 3 protein:vir:105002 Length: 432 100.0 1E-111 8E-115 628.6 46.6 429 1-429 1-432 (432) 4 protein:vir:102855 Length: 432 100.0 1E-111 8E-115 628.6 46.6 429 1-429 1-432 (432) 5 protein:vir:81152 Length: 411 100.0 4E-104 3E-107 587.2 43.8 409 1-417 1-411 (411) 6 protein:vir:1380 Length: 422 # 100.0 6E-103 4E-106 580.8 43.4 415 1-420 1-422 (422) 7 protein:vir:102118 Length: 409 100.0 2E-101 1E-104 572.4 44.5 408 1-417 1-409 (409) 8 protein:vir:4454 Length: 414 # 100.0 8E-101 5E-104 569.3 44.3 411 1-425 1-414 (414) 9 protein:vir:4509 Length: 424 # 100.0 3E-100 2E-103 566.4 44.1 408 1-429 16-424 (424) 10 protein:vir:6240 Length: 457 # 100.0 5.1E-99 3E-102 559.5 44.8 426 1-429 1-445 (457) 11 protein:vir:1326 Length: 457 # 100.0 8.7E-99 5E-102 558.2 44.9 426 1-429 1-445 (457) 12 protein:vir:100249 Length: 431 100.0 3.2E-98 2E-101 555.1 43.5 405 1-425 1-431 (431) 13 protein:vir:1266 Length: 416 # 100.0 5E-98 3E-101 554.0 44.4 414 2-428 1-416 (416) 14 protein:vir:483 Length: 413 # 100.0 3.9E-98 2E-101 554.6 43.6 410 1-425 1-413 (413) 15 protein:vir:105064 Length: 421 100.0 7.4E-98 5E-101 553.1 43.8 409 1-429 1-416 (421) 16 protein:vir:1884 Length: 424 # 100.0 5E-98 3E-101 554.0 42.6 405 1-426 14-424 (424) 17 protein:vir:93610 Length: 454 100.0 1.2E-97 7E-101 551.9 43.4 417 7-429 1-433 (454) 18 protein:vir:189 Length: 424 # 100.0 9.6E-98 6E-101 552.5 42.1 406 1-426 14-424 (424) 19 protein:vir:100150 Length: 437 100.0 5E-97 3E-100 548.5 44.1 421 1-429 1-436 (437) 20 protein:vir:10362 Length: 432 100.0 8.8E-97 5E-100 547.2 42.8 415 1-429 7-431 (432) 21 protein:vir:81072 Length: 432 100.0 1E-96 6E-100 546.8 43.2 416 1-429 7-431 (432) 22 protein:vir:97060 Length: 432 100.0 1.1E-96 7E-100 546.6 42.9 415 1-429 7-431 (432) 23 protein:vir:5737 Length: 419 # 100.0 1.4E-96 9E-100 546.0 43.2 413 1-429 1-419 (419) 24 protein:vir:4337 Length: 434 # 100.0 2.3E-96 1.4E-99 544.9 43.4 419 1-428 1-434 (434) 25 protein:vir:1431 Length: 419 # 100.0 2.1E-96 1.3E-99 545.2 42.7 408 6-429 1-414 (419) 26 protein:vir:2683 Length: 412 # 100.0 1E-95 6.4E-99 541.3 41.2 406 1-422 1-412 (412) 27 protein:vir:8418 Length: 409 # 100.0 3.3E-95 2.1E-98 538.6 43.3 405 1-429 1-408 (409) 28 protein:vir:80333 Length: 419 100.0 1.4E-95 8.6E-99 540.6 40.9 409 1-429 1-415 (419) 29 protein:vir:96980 Length: 409 100.0 6.4E-95 4E-98 537.0 41.7 403 1-422 4-409 (409) 30 protein:vir:7853 Length: 518 # 100.0 1.5E-93 9.3E-97 529.5 43.9 418 1-429 1-433 (518) 31 protein:vir:93943 Length: 409 100.0 9.4E-94 5.8E-97 530.6 41.8 403 1-422 1-409 (409) 32 protein:vir:94426 Length: 409 100.0 1.2E-93 7.2E-97 530.1 41.1 403 1-422 1-409 (409) 33 protein:vir:101648 Length: 518 100.0 3.9E-93 2.4E-96 527.2 43.8 418 1-429 1-433 (518) 34 protein:vir:98396 Length: 441 100.0 4E-93 2.5E-96 527.2 43.1 413 1-429 23-440 (441) 35 protein:vir:79984 Length: 441 100.0 7.7E-93 4.8E-96 525.6 43.0 413 1-429 23-440 (441) 36 protein:vir:9408 Length: 441 # 100.0 7.7E-93 4.8E-96 525.6 43.0 413 1-429 23-440 (441) 37 protein:vir:4598 Length: 416 # 100.0 1.4E-92 8.9E-96 524.1 43.9 408 1-429 1-415 (416) 38 protein:vir:81095 Length: 416 100.0 1.4E-92 8.9E-96 524.1 43.9 408 1-429 1-415 (416) 39 protein:vir:3868 Length: 417 # 100.0 1.5E-92 9.5E-96 524.0 43.1 404 1-429 1-414 (417) 40 protein:vir:81218 Length: 423 100.0 2.3E-92 1.4E-95 523.0 42.1 409 1-420 1-423 (423) 41 protein:vir:9702 Length: 406 # 100.0 2.8E-90 1.7E-93 511.6 43.3 397 1-424 1-406 (406) 42 protein:vir:101647 Length: 460 100.0 2.3E-90 1.4E-93 512.0 41.9 410 1-420 2-460 (460) 43 protein:vir:95378 Length: 406 100.0 4.7E-89 2.9E-92 504.8 42.0 399 1-425 1-406 (406) 44 protein:vir:8100 Length: 466 # 100.0 1.6E-87 1E-90 496.4 43.1 420 1-429 1-464 (466) 45 protein:vir:8317 Length: 409 # 100.0 2E-88 1.2E-91 501.4 38.0 375 1-402 1-409 (409) 46 protein:vir:94666 Length: 723 100.0 1.3E-87 8.1E-91 496.9 39.3 402 1-429 1-443 (723) 47 protein:vir:80134 Length: 403 100.0 2.6E-87 1.6E-90 495.3 39.2 396 1-425 1-403 (403) 48 protein:vir:960 Length: 413 # 100.0 9.9E-87 6.2E-90 492.1 38.8 391 1-417 1-413 (413) 49 protein:vir:3843 Length: 397 # 100.0 3.5E-85 2.2E-88 483.6 42.6 396 1-429 1-396 (397) 50 protein:vir:102727 Length: 945 100.0 5.4E-85 3.4E-88 482.6 42.3 421 1-429 60-538 (945) 51 protein:vir:9359 Length: 348 # 100.0 1.6E-85 1E-88 485.5 38.9 346 63-422 1-348 (348) 52 protein:vir:104259 Length: 403 100.0 1.4E-83 8.5E-87 474.9 40.3 391 1-429 1-403 (403) 53 protein:vir:6210 Length: 394 # 100.0 2.1E-83 1.3E-86 473.8 38.3 384 1-420 1-394 (394) 54 protein:vir:100187 Length: 385 100.0 4.8E-81 3E-84 460.9 40.8 377 1-420 1-385 (385) 55 protein:vir:80796 Length: 574 100.0 1.1E-80 6.9E-84 458.9 40.7 424 1-429 27-524 (574) 56 protein:vir:9507 Length: 395 # 100.0 1.1E-80 6.9E-84 458.9 39.3 385 1-429 1-395 (395) 57 protein:vir:100650 Length: 395 100.0 1.1E-80 6.9E-84 458.9 39.3 385 1-429 1-395 (395) 58 protein:vir:101289 Length: 395 100.0 1.1E-80 6.9E-84 458.9 39.3 385 1-429 1-395 (395) 59 protein:vir:95965 Length: 385 100.0 6.3E-81 3.9E-84 460.3 36.8 374 1-420 1-385 (385) 60 protein:vir:4854 Length: 386 # 100.0 7.3E-80 4.5E-83 454.4 41.3 382 1-421 1-386 (386) 61 protein:vir:100882 Length: 383 100.0 5.4E-80 3.4E-83 455.2 40.4 377 1-418 1-383 (383) 62 protein:vir:80644 Length: 551 100.0 5.1E-80 3.2E-83 455.3 39.1 423 1-429 5-525 (551) 63 protein:vir:4089 Length: 395 # 100.0 2.3E-80 1.4E-83 457.2 36.0 389 1-424 1-395 (395) 64 protein:vir:63755 Length: 547 100.0 5.5E-79 3.4E-82 449.6 39.3 423 1-429 1-513 (547) 65 protein:vir:7407 Length: 392 # 100.0 1.2E-78 7.2E-82 447.9 40.1 384 1-422 3-392 (392) 66 protein:vir:3989 Length: 392 # 100.0 6.9E-78 4.3E-81 443.6 40.3 384 1-422 3-392 (392) 67 protein:vir:1023 Length: 392 # 100.0 6.9E-78 4.3E-81 443.6 40.3 384 1-422 3-392 (392) 68 protein:vir:4995 Length: 384 # 100.0 2.3E-78 1.4E-81 446.2 37.7 377 1-396 1-384 (384) 69 protein:vir:100691 Length: 535 100.0 1.5E-77 9.1E-81 441.8 41.4 421 1-429 34-513 (535) 70 protein:vir:9641 Length: 395 # 100.0 1.5E-78 9.2E-82 447.3 34.8 381 1-423 1-395 (395) 71 protein:vir:1082 Length: 359 # 100.0 9.9E-78 6.1E-81 442.8 38.8 352 1-390 1-359 (359) 72 protein:vir:78310 Length: 376 100.0 3.1E-78 1.9E-81 445.5 35.5 368 1-419 1-376 (376) 73 protein:vir:94002 Length: 378 100.0 7.2E-78 4.5E-81 443.5 35.8 361 1-429 1-376 (378) 74 protein:vir:93867 Length: 378 100.0 1E-77 6.5E-81 442.6 35.8 361 1-429 1-376 (378) 75 protein:vir:1661 Length: 378 # 100.0 1.8E-77 1.1E-80 441.3 35.8 361 1-429 1-376 (378) 76 protein:vir:4828 Length: 382 # 100.0 2E-76 1.3E-79 435.6 41.0 374 1-421 1-382 (382) 77 protein:vir:4952 Length: 386 # 100.0 1.8E-76 1.1E-79 435.8 40.5 384 1-421 1-386 (386) 78 protein:vir:96579 Length: 576 100.0 3.3E-76 2E-79 434.4 41.6 419 1-429 27-522 (576) 79 protein:vir:99312 Length: 563 100.0 3E-76 1.8E-79 434.6 39.9 413 1-429 43-523 (563) 80 protein:vir:95599 Length: 563 100.0 3E-76 1.8E-79 434.6 39.9 413 1-429 43-523 (563) 81 protein:vir:98643 Length: 395 100.0 7.8E-77 4.9E-80 437.8 36.1 383 1-423 1-395 (395) 82 protein:vir:4194 Length: 540 # 100.0 1.1E-75 6.8E-79 431.5 38.4 405 1-429 6-461 (540) 83 protein:vir:3153 Length: 467 # 100.0 1.3E-75 8.1E-79 431.1 38.4 383 43-429 1-441 (467) 84 protein:vir:94869 Length: 378 100.0 8.1E-76 5E-79 432.3 35.7 361 1-429 1-376 (378) 85 protein:vir:858 Length: 378 # 100.0 1E-75 6.3E-79 431.7 36.2 361 1-429 1-376 (378) 86 protein:vir:4156 Length: 542 # 100.0 8.5E-75 5.3E-78 426.7 36.3 403 1-429 6-450 (542) 87 protein:vir:99452 Length: 651 100.0 7.7E-70 4.8E-73 399.5 33.9 422 1-429 1-536 (651) 88 protein:vir:79772 Length: 648 100.0 1.1E-66 6.9E-70 382.2 39.7 415 1-429 8-504 (648) 89 protein:vir:78641 Length: 278 100.0 1.5E-64 9E-68 370.6 31.6 278 63-354 1-278 (278) 90 protein:vir:79150 Length: 368 100.0 1.8E-56 1.1E-59 326.2 28.8 341 1-372 1-368 (368) 91 protein:vir:103971 Length: 376 100.0 4.4E-54 2.7E-57 313.1 33.0 318 1-361 26-376 (376) 92 protein:vir:267 Length: 348 # 100.0 9.4E-54 5.9E-57 311.3 31.8 322 1-362 1-348 (348) 93 protein:vir:79207 Length: 351 100.0 2.6E-53 1.6E-56 308.9 32.2 318 1-361 1-351 (351) 94 protein:vir:78191 Length: 351 100.0 4.5E-53 2.8E-56 307.6 32.6 318 1-361 1-351 (351) 95 protein:vir:98567 Length: 340 100.0 4.6E-53 2.9E-56 307.5 31.4 321 1-358 1-340 (340) 96 protein:vir:100328 Length: 346 100.0 7.8E-53 4.9E-56 306.2 29.3 327 1-359 1-346 (346) 97 protein:vir:3743 Length: 345 # 100.0 4.2E-52 2.6E-55 302.3 31.5 322 1-356 1-345 (345) 98 protein:vir:78749 Length: 337 100.0 5.9E-53 3.6E-56 306.9 26.0 321 1-355 1-337 (337) 99 protein:vir:1150 Length: 350 # 100.0 1E-51 6.5E-55 300.1 31.6 320 1-354 1-350 (350) 100 protein:vir:3780 Length: 345 # 100.0 9.1E-52 5.6E-55 300.4 30.7 330 1-356 1-345 (345) 101 protein:vir:5691 Length: 344 # 100.0 2.1E-51 1.3E-54 298.4 31.1 321 1-359 1-344 (344) 102 protein:vir:6058 Length: 344 # 100.0 3.1E-51 2E-54 297.5 31.7 321 1-359 1-344 (344) 103 protein:vir:2013 Length: 344 # 100.0 5.3E-51 3.3E-54 296.2 29.7 321 1-359 1-344 (344) 104 protein:vir:4698 Length: 251 # 100.0 4.3E-51 2.6E-54 296.7 26.8 248 1-263 1-251 (251) 105 protein:vir:98853 Length: 219 100.0 4.3E-43 2.7E-46 252.8 21.9 211 140-358 1-219 (219) 106 protein:vir:5249 Length: 437 # 99.9 7.6E-27 4.7E-30 163.8 29.9 399 1-427 1-437 (437) 107 protein:vir:107742 Length: 537 99.9 2.9E-23 1.8E-26 144.1 29.6 407 1-428 48-537 (537) 108 protein:vir:94049 Length: 532 99.9 2.8E-23 1.7E-26 144.2 28.6 412 1-429 17-510 (532) 109 protein:vir:79647 Length: 435 99.9 9.5E-23 5.9E-26 141.3 23.6 386 1-429 1-435 (435) 110 protein:vir:99563 Length: 862 99.8 5.4E-21 3.3E-24 131.7 29.1 404 1-429 66-563 (862) 111 protein:vir:103860 Length: 528 99.8 1.9E-19 1.2E-22 123.2 35.5 409 1-429 1-449 (528) 112 protein:vir:96068 Length: 765 99.8 2.8E-20 1.7E-23 127.8 30.2 405 1-429 37-535 (765) 113 protein:vir:99232 Length: 526 99.8 2.8E-19 1.7E-22 122.3 35.0 408 1-429 1-448 (526) 114 protein:vir:79538 Length: 502 99.8 5.2E-21 3.2E-24 131.8 24.4 425 1-428 1-502 (502) 115 protein:vir:104338 Length: 422 99.8 1.4E-20 8.7E-24 129.4 26.0 381 1-429 1-422 (422) 116 protein:vir:107662 Length: 427 99.8 1E-20 6.2E-24 130.2 25.1 380 1-429 1-427 (427) 117 protein:vir:108215 Length: 469 99.8 7.4E-19 4.6E-22 120.0 33.4 409 1-429 1-464 (469) 118 protein:vir:79233 Length: 526 99.8 2.8E-18 1.7E-21 116.8 34.7 408 1-429 1-448 (526) 119 protein:vir:80040 Length: 461 99.8 1.7E-19 1.1E-22 123.4 24.0 393 1-428 1-461 (461) 120 protein:vir:96738 Length: 505 99.8 5.6E-20 3.5E-23 126.1 21.1 419 1-428 8-505 (505) 121 protein:vir:99853 Length: 488 99.8 1.2E-17 7.3E-21 113.4 32.1 382 1-429 14-409 (488) 122 protein:vir:1986 Length: 512 # 99.8 2.1E-17 1.3E-20 112.0 32.9 405 1-429 1-449 (512) 123 protein:vir:389 Length: 530 # 99.7 9.1E-19 5.6E-22 119.5 23.3 427 1-429 1-529 (530) 124 protein:vir:3420 Length: 533 # 99.7 1.1E-18 7.1E-22 118.9 23.5 426 1-429 3-530 (533) 125 protein:vir:79063 Length: 491 99.7 8E-17 5E-20 108.8 31.6 396 1-429 3-422 (491) 126 protein:vir:10321 Length: 495 99.7 2.1E-18 1.3E-21 117.6 22.8 423 1-429 1-494 (495) 127 protein:vir:95542 Length: 548 99.7 6.5E-19 4E-22 120.3 19.7 421 1-429 1-513 (548) 128 protein:vir:107880 Length: 491 99.7 4.2E-16 2.6E-19 104.9 34.3 393 1-429 3-423 (491) 129 protein:vir:6382 Length: 553 # 99.7 3.2E-18 2E-21 116.5 22.2 428 1-429 2-553 (553) 130 protein:vir:106491 Length: 646 99.7 2.4E-18 1.5E-21 117.2 19.3 418 1-429 1-500 (646) 131 protein:vir:79511 Length: 448 99.7 2.9E-16 1.8E-19 105.8 28.9 399 1-429 1-439 (448) 132 protein:vir:95254 Length: 488 99.7 1.1E-15 7E-19 102.5 32.1 409 1-429 1-487 (488) 133 protein:vir:77981 Length: 448 99.7 6.6E-16 4.1E-19 103.8 30.4 397 1-429 1-438 (448) 134 protein:vir:98816 Length: 446 99.6 4.4E-16 2.7E-19 104.8 25.6 377 1-394 1-446 (446) 135 protein:vir:102426 Length: 631 99.6 1.3E-16 8.3E-20 107.6 20.2 416 1-429 1-516 (631) 136 protein:vir:8654 Length: 629 # 99.6 1.5E-16 9.5E-20 107.3 19.7 411 1-429 1-519 (629) 137 protein:vir:99088 Length: 629 99.6 2.4E-16 1.5E-19 106.2 19.7 410 1-429 1-519 (629) 138 protein:vir:107517 Length: 639 99.6 4.3E-16 2.6E-19 104.8 19.4 415 1-429 1-516 (639) 139 protein:vir:97900 Length: 639 99.6 4.3E-16 2.6E-19 104.8 19.4 415 1-429 1-516 (639) 140 protein:vir:106027 Length: 629 99.5 5.7E-15 3.5E-18 98.7 21.6 414 1-429 1-507 (629) 141 protein:vir:78161 Length: 355 99.4 7.7E-13 4.8E-16 87.0 27.2 300 118-429 1-333 (355) 142 protein:vir:78589 Length: 695 99.4 4E-13 2.5E-16 88.6 23.2 407 1-429 66-550 (695) 143 protein:vir:101541 Length: 694 99.4 6.2E-13 3.9E-16 87.5 23.2 407 1-429 65-549 (694) 144 protein:vir:3648 Length: 695 # 99.4 7.5E-13 4.7E-16 87.0 22.7 407 1-429 66-550 (695) 145 protein:vir:106716 Length: 698 99.4 4.1E-13 2.6E-16 88.5 21.3 411 1-429 66-553 (698) 146 protein:vir:105782 Length: 449 99.4 4.1E-12 2.6E-15 83.0 26.1 374 1-429 23-448 (449) 147 protein:vir:98444 Length: 434 99.1 1.4E-10 8.4E-14 74.7 23.0 365 38-428 1-434 (434) 148 protein:vir:98883 Length: 517 99.0 9.2E-10 5.7E-13 70.1 23.5 406 1-422 1-517 (517) 149 protein:vir:5961 Length: 503 # 99.0 5.5E-09 3.4E-12 65.8 27.6 400 1-429 13-497 (503) 150 protein:vir:2427 Length: 485 # 99.0 6.4E-09 4E-12 65.5 26.2 393 1-429 6-484 (485) 151 protein:vir:79703 Length: 505 98.9 6.5E-09 4E-12 65.5 24.9 396 1-427 1-505 (505) 152 protein:vir:7768 Length: 484 # 98.9 1E-08 6.5E-12 64.3 25.9 396 1-429 1-483 (484) 153 protein:vir:80959 Length: 499 98.9 5.4E-09 3.4E-12 65.9 24.2 401 1-422 3-499 (499) 154 protein:vir:99916 Length: 504 98.9 1.8E-09 1.1E-12 68.6 21.4 407 1-428 23-504 (504) 155 protein:vir:104082 Length: 485 98.9 9E-09 5.6E-12 64.7 25.0 398 1-429 8-485 (485) 156 protein:vir:4782 Length: 522 # 98.9 1.1E-08 6.8E-12 64.2 24.2 407 1-429 1-522 (522) 157 protein:vir:1587 Length: 508 # 98.9 8.6E-09 5.3E-12 64.8 23.4 399 1-429 1-508 (508) 158 protein:vir:5839 Length: 533 # 98.9 8.9E-09 5.5E-12 64.7 23.2 411 1-429 1-508 (533) 159 protein:vir:4898 Length: 502 # 98.8 2.8E-08 1.7E-11 62.0 26.5 411 1-429 31-498 (502) 160 protein:vir:38 Length: 496 # N 98.8 1.2E-08 7.8E-12 63.9 23.8 399 3-429 1-496 (496) 161 protein:vir:2341 Length: 488 # 98.8 3.7E-09 2.3E-12 66.8 20.8 399 1-425 10-488 (488) 162 protein:vir:94101 Length: 474 98.8 4.3E-08 2.6E-11 61.0 27.8 402 1-427 21-474 (474) 163 protein:vir:105889 Length: 474 98.8 4.3E-08 2.6E-11 61.0 27.8 402 1-427 21-474 (474) 164 protein:vir:7987 Length: 456 # 98.8 1.5E-09 9.2E-13 69.0 16.8 384 1-426 7-456 (456) 165 protein:vir:9306 Length: 511 # 98.8 2E-08 1.3E-11 62.8 22.9 413 1-429 14-506 (511) 166 protein:vir:3028 Length: 500 # 98.7 6.8E-08 4.2E-11 59.9 25.7 399 1-427 1-500 (500) 167 protein:vir:9815 Length: 500 # 98.7 6.8E-08 4.2E-11 59.9 25.7 399 1-427 1-500 (500) 168 protein:vir:99072 Length: 479 98.7 3.1E-08 1.9E-11 61.7 22.8 392 1-429 9-470 (479) 169 protein:vir:105819 Length: 456 98.7 3.7E-09 2.3E-12 66.8 17.4 385 1-423 7-456 (456) 170 protein:vir:102602 Length: 456 98.7 3.7E-09 2.3E-12 66.8 17.4 385 1-423 7-456 (456) 171 protein:vir:96494 Length: 501 98.7 7.7E-08 4.8E-11 59.6 24.5 402 1-429 38-497 (501) 172 protein:vir:8184 Length: 474 # 98.7 3E-08 1.9E-11 61.8 22.2 398 1-420 17-474 (474) 173 protein:vir:103951 Length: 511 98.7 5.2E-08 3.2E-11 60.5 23.2 412 1-429 39-507 (511) 174 protein:vir:96240 Length: 511 98.7 4.3E-08 2.7E-11 61.0 22.6 411 1-429 14-511 (511) 175 protein:vir:3964 Length: 453 # 98.7 7.1E-08 4.4E-11 59.8 23.5 394 1-429 1-451 (453) 176 protein:vir:95806 Length: 440 98.7 5.2E-08 3.2E-11 60.5 22.5 391 3-425 1-440 (440) 177 protein:vir:106639 Length: 481 98.7 1.1E-07 7E-11 58.7 28.0 406 1-429 6-480 (481) 178 protein:vir:78907 Length: 518 98.7 8.5E-08 5.3E-11 59.3 23.4 403 1-425 1-518 (518) 179 protein:vir:94742 Length: 409 98.7 1.4E-07 9E-11 58.1 28.0 350 1-390 3-409 (409) 180 protein:vir:4223 Length: 486 # 98.6 1.6E-07 9.8E-11 57.9 24.7 396 1-428 6-486 (486) 181 protein:vir:97171 Length: 512 98.6 1.2E-07 7.4E-11 58.6 22.7 408 1-429 42-508 (512) 182 protein:vir:99522 Length: 470 98.6 1.9E-07 1.2E-10 57.5 25.2 393 1-429 19-470 (470) 183 protein:vir:78805 Length: 511 98.6 8.5E-08 5.3E-11 59.3 20.9 411 1-429 39-511 (511) 184 protein:vir:96366 Length: 511 98.6 8.5E-08 5.3E-11 59.3 20.9 411 1-429 39-511 (511) 185 protein:vir:80680 Length: 441 98.6 7E-08 4.3E-11 59.8 19.9 378 1-417 6-441 (441) 186 protein:vir:2732 Length: 501 # 98.6 2.8E-07 1.7E-10 56.5 26.2 407 1-429 38-496 (501) 187 protein:vir:103219 Length: 201 98.5 3.1E-09 1.9E-12 67.3 11.6 182 222-429 1-201 (201) 188 protein:vir:99781 Length: 511 98.5 2.2E-07 1.4E-10 57.1 21.5 410 1-429 14-511 (511) 189 protein:vir:79043 Length: 479 98.5 5.3E-07 3.3E-10 55.0 26.2 383 1-425 25-479 (479) 190 protein:vir:96266 Length: 474 98.4 6.4E-07 4E-10 54.5 25.1 385 1-429 25-471 (474) 191 protein:vir:95899 Length: 474 98.4 6.4E-07 4E-10 54.5 25.1 385 1-429 25-471 (474) 192 protein:vir:94805 Length: 492 98.4 7.1E-07 4.4E-10 54.3 28.5 391 1-427 43-492 (492) 193 protein:vir:105292 Length: 478 98.4 7.7E-07 4.8E-10 54.1 28.5 379 1-427 32-478 (478) 194 protein:vir:78083 Length: 537 98.4 7.8E-07 4.9E-10 54.1 32.4 402 1-429 8-524 (537) 195 protein:vir:93747 Length: 472 98.4 7.9E-07 4.9E-10 54.0 27.8 386 1-427 22-472 (472) 196 protein:vir:1236 Length: 483 # 98.4 8.6E-07 5.4E-10 53.8 27.5 388 1-427 34-483 (483) 197 protein:vir:95113 Length: 474 98.4 8.7E-07 5.4E-10 53.8 28.3 394 1-427 29-474 (474) 198 protein:vir:78537 Length: 480 98.4 8.9E-07 5.5E-10 53.7 24.5 399 1-429 1-475 (480) 199 protein:vir:3609 Length: 452 # 98.4 1E-06 6.4E-10 53.4 21.5 384 1-429 17-450 (452) 200 protein:vir:1634 Length: 409 # 98.4 1.1E-06 6.7E-10 53.3 27.0 347 1-390 3-409 (409) 201 protein:vir:2500 Length: 501 # 98.3 1.2E-06 7.5E-10 53.0 25.4 387 1-429 29-498 (501) 202 protein:vir:96839 Length: 474 98.3 1.3E-06 8.3E-10 52.8 28.5 382 1-429 28-474 (474) 203 protein:vir:4073 Length: 279 # 98.3 6.9E-09 4.3E-12 65.3 8.0 278 47-393 1-279 (279) 204 protein:vir:78227 Length: 480 98.2 2.3E-06 1.5E-09 51.4 26.2 399 1-429 1-476 (480) 205 protein:vir:94498 Length: 474 98.2 2.6E-06 1.6E-09 51.2 27.6 386 1-427 29-474 (474) 206 protein:vir:97447 Length: 474 98.2 2.6E-06 1.6E-09 51.2 27.6 386 1-427 29-474 (474) 207 protein:vir:9751 Length: 422 # 98.2 2.6E-06 1.6E-09 51.2 27.6 362 1-414 4-422 (422) 208 protein:vir:97336 Length: 492 98.2 2.8E-06 1.7E-09 51.1 28.1 388 1-427 42-492 (492) 209 protein:vir:9871 Length: 429 # 98.0 6.5E-06 4E-09 49.0 24.5 383 1-427 1-429 (429) 210 protein:vir:9568 Length: 410 # 98.0 7.5E-06 4.6E-09 48.7 28.6 353 1-416 1-410 (410) 211 protein:vir:733 Length: 453 # 98.0 7.9E-06 4.9E-09 48.6 25.7 399 1-429 11-452 (453) 212 protein:vir:9922 Length: 489 # 98.0 8.9E-06 5.5E-09 48.3 22.5 394 1-428 21-489 (489) 213 protein:vir:107112 Length: 478 97.9 1.3E-05 8.1E-09 47.3 28.0 385 1-429 23-476 (478) 214 protein:vir:94546 Length: 506 97.8 1.7E-05 1.1E-08 46.7 24.7 396 1-429 28-502 (506) 215 protein:vir:105461 Length: 470 97.8 2E-05 1.3E-08 46.3 24.8 382 1-421 7-470 (470) 216 protein:vir:96179 Length: 468 97.7 2.3E-05 1.5E-08 46.0 27.3 376 1-422 14-468 (468) 217 protein:vir:102950 Length: 471 97.7 3.1E-05 1.9E-08 45.3 23.8 381 1-422 1-471 (471) 218 protein:vir:106571 Length: 499 97.6 4.3E-05 2.7E-08 44.5 26.8 393 1-429 16-491 (499) 219 protein:vir:101494 Length: 527 96.3 0.00076 4.7E-07 37.7 21.7 400 1-429 1-523 (527) 220 protein:vir:102239 Length: 527 96.3 0.00081 5E-07 37.5 21.8 401 1-429 1-523 (527) 221 protein:vir:98265 Length: 524 95.6 0.0017 1.1E-06 35.7 27.0 408 1-429 4-523 (524) 222 protein:vir:80453 Length: 535 95.1 0.0028 1.7E-06 34.6 22.0 403 1-426 1-535 (535) 223 protein:vir:97376 Length: 320 95.0 0.0029 1.8E-06 34.5 12.5 315 1-420 1-320 (320) 224 protein:vir:97265 Length: 513 94.5 0.0042 2.6E-06 33.6 27.4 400 1-429 1-500 (513) 225 protein:vir:104500 Length: 537 93.2 0.0083 5.1E-06 32.0 23.7 420 3-428 1-537 (537) 226 protein:vir:103177 Length: 533 93.2 0.0085 5.3E-06 31.9 24.5 420 1-429 1-530 (533) 227 protein:vir:104892 Length: 558 93.1 0.0088 5.4E-06 31.9 23.9 418 1-429 1-546 (558) 228 protein:vir:102330 Length: 451 92.3 0.012 7.3E-06 31.2 22.9 380 1-427 1-451 (451) 229 protein:vir:106999 Length: 564 92.1 0.013 8E-06 30.9 29.1 419 1-429 1-563 (564) 230 protein:vir:105154 Length: 525 90.6 0.02 1.2E-05 29.9 16.5 399 1-429 47-513 (525) 231 protein:vir:100598 Length: 516 90.6 0.02 1.2E-05 29.9 20.5 406 1-421 1-516 (516) 232 protein:vir:95149 Length: 501 90.4 0.021 1.3E-05 29.8 26.4 389 1-422 1-501 (501) 233 protein:vir:101806 Length: 516 89.7 0.025 1.5E-05 29.4 22.0 407 1-421 1-516 (516) 234 protein:vir:101189 Length: 516 89.7 0.025 1.5E-05 29.4 22.0 407 1-421 1-516 (516) 235 protein:vir:108049 Length: 524 89.2 0.028 1.7E-05 29.1 22.7 408 1-429 1-523 (524) 236 protein:vir:106282 Length: 521 87.3 0.04 2.5E-05 28.3 22.4 408 1-429 1-520 (521) 237 protein:vir:81017 Length: 521 86.9 0.042 2.6E-05 28.1 23.1 406 1-429 5-520 (521) 238 protein:vir:6596 Length: 521 # 82.2 0.079 4.9E-05 26.6 23.4 406 1-429 5-520 (521) 239 protein:vir:5665 Length: 511 # 79.1 0.11 6.7E-05 25.9 23.2 405 1-429 1-510 (511) 240 protein:vir:78393 Length: 489 77.6 0.12 7.6E-05 25.6 22.8 398 7-429 1-488 (489) 241 protein:vir:6896 Length: 523 # 65.9 0.28 0.00017 23.6 23.1 408 1-429 1-522 (523) 242 protein:vir:7208 Length: 524 # 64.6 0.3 0.00018 23.5 23.1 407 1-429 1-523 (524) 243 protein:vir:94956 Length: 452 63.4 0.32 0.0002 23.3 29.8 379 1-428 1-452 (452) 244 protein:vir:103458 Length: 524 62.8 0.33 0.0002 23.2 23.2 407 1-429 1-523 (524) 245 protein:vir:96783 Length: 488 43.5 0.84 0.00052 21.0 25.4 375 1-401 14-488 (488) 246 protein:vir:7430 Length: 563 # 38.8 1 0.00065 20.5 21.1 411 1-429 1-541 (563) No 1 >protein:vir:102080 Length: 429 # NCBI annotation: portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:1503 # MgeName: Fah # Cross-refs: genbank:acc:YP_512313;genbank:gi:89152482;genbank:GeneID:3953073 Probab=100.00 E-value=2.1e-113 Score=638.35 Aligned_cols=429 Identities=100% Similarity=1.427 Sum_probs=415.5 Q ss_pred CchhhhhhcccccccccccccCCchHHHHHhhcCCCCcceechhhhhccHHHHHHHHHHHHhhccCceEEEecCCceeee Q lcl|Aclame:pro 1 MDSVKKFFNFEKRQTSQVIELNKDDEKLLEWLGISPSTISVKGKNALKVATVFACIKILSESVSKLPLKIYQEDEYGIQR 80 (429) Q Consensus 1 Mg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~~~~ 80 (429) ||||++||+++++++.+....+.....+..|+|.+.+.+.++.+.|+++++||+||++||++||++||+++++++++... T Consensus 1 M~~~~~~f~~~~r~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~al~~~~v~~~i~~ia~~ia~l~~~~~~~~~~~~~~ 80 (429) T protein:vir:10 1 MDSVKKFFNFEKRQTSQVIELNKDDEKLLEWLGISPSTISVKGKNALKVATVFACIKILSESVSKLPLKIYQEDEYGIQR 80 (429) T ss_pred CchhhhhhcccccCcccccccCCChHHHHHHhcCCCCcceechhhhhccHHHHHHHHHHHHhhccCceEEEEecCCceee Confidence 99999999999988888888888889999999999999999999999999999999999999999999999999888888 Q ss_pred eecchhhhhhcccCcCCCCHHHHHHHHHHHHHhhCCeEEEEeeCCCCceEEEEeeCCcceEEEEcCCcceeeeeeEEEee Q lcl|Aclame:pro 81 GTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVYIDDVGLLNSKTKMWYVV 160 (429) Q Consensus 81 ~~~~~~~~~l~~~PN~~~s~~~~~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~l~p~~v~~~~~~~~~~~~~~~~~~~~ 160 (429) ...|+++++|+.+||++||+++||+.++.+++++||+|++++++..|++.+|||++|++|++..++.+........+|.+ T Consensus 81 ~~~~~l~~lL~~~PN~~~t~~~f~~~~~~~lll~Gnay~~i~r~~~G~~~~L~~i~~~~v~v~~~~~~~~~~~~~~~~~~ 160 (429) T protein:vir:10 81 GTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVYIDDVGLLNSKTKMWYVV 160 (429) T ss_pred ccccHHHHHHHhhccCCCCHHHHHHHHHHHHhhcCCeEEEEEECCCCcEEEEEEEcCceeEEEEcCcccccccceEEEEE Confidence 88999999999999999999999999999999999999999999999999999999999999999887777777778888 Q ss_pred cccCceEEEccceEEEeecCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHHccCCcceEEEeCCCCCHHHHHHHHHH Q lcl|Aclame:pro 161 NTGGQQRVLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGDLNEDAKKVFREN 240 (429) Q Consensus 161 ~~~g~~~~~~~~evih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~~e~~~~~~~~ 240 (429) ..+|..+.|+++|||||+++++.++++|+||+..+...+..+.+++++..++|+||++|+|++++++.+++++.+++++. T Consensus 161 ~~~g~~~~~~~~evih~~~~~~~~~~~G~s~i~~~~~~i~~~~~~~~~~~~~~~ng~~~~~il~~~~~l~~e~~~~~~~~ 240 (429) T protein:vir:10 161 NTGGQQRVLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGDLNEDAKKVFREN 240 (429) T ss_pred ccCCeEEEEccccEEEecCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhccCCccEEEEcCCCCCHHHHHHHHHH Confidence 99999999999999999988899999999999999999999999999999999999999999999999999999999999 Q ss_pred HHHHhcccccccceeecCCCceeEecCCChhHHHHHHHHHHHHHHHHHHhcCChhhcCCccccccccHHHHHHHHHHHHH Q lcl|Aclame:pro 241 FESMSSGLQNSHRIALMPVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKATLNNIEQQQQQFYTDTL 320 (429) Q Consensus 241 ~~~~~~g~~~~~~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~fgvp~~~l~~~~~~~~~n~~~~~~~~~~~~l 320 (429) |++.++|..|+|+++|+++|++|+++++++.|+|++|.+++++++||++|||||.+|+..+.++++|.+++.++|++.+| T Consensus 241 ~~~~~~g~~n~~~~~vl~~g~~~~~l~~~~~d~q~~e~~~~~~~~Ia~~fgVP~~~lg~~~~~~~sn~e~~~~~f~~~~l 320 (429) T protein:vir:10 241 FESMSSGLQNSHRIALMPVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKATLNNIEQQQQQFYTDTL 320 (429) T ss_pred HHHHhccccccCceeecCCCceEEEccCChhHHHHHHHHHHHHHHHHHHhCCCHHHhCCCCCCCcccHHHHHHHHHHHHH Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred hHHHHHHHHHHHHhhccchhhcchhhhhhhhhhHhhhhHHHHHHHHHHHHhCCCCCHHHHHHHhCCCCCCCcceeeeccc Q lcl|Aclame:pro 321 QATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEAGGDRLLVNGN 400 (429) Q Consensus 321 ~P~~~~i~~~l~~~ll~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~Gl~~~~~gD~~~~~~n 400 (429) .|+++.|+++||++||++.++..+++++||++.+++.|.+++++.+.+++++|++|+||+|+++|+||+||||++++|+| T Consensus 321 ~P~~~~ie~~ln~kl~~~~~~~~g~~~~fd~~~ll~~d~~~~~~~~~~~~~~G~~T~NE~R~~~gl~p~~ggD~~~~~~n 400 (429) T protein:vir:10 321 QATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEAGGDRLLVNGN 400 (429) T ss_pred HHHHHHHHHHHHHhhcChhhcCCCcEEEeechhhhcCCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCcCeeeeccc Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred cccccccccccCCCCCCCCCCCCCCCCCC Q lcl|Aclame:pro 401 MLPIDMAGQAYLKGGDTNGEVSKEGNEGN 429 (429) Q Consensus 401 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~n 429 (429) ++|++..++...+||+++++..++++||| T Consensus 401 ~~~~d~~~~~~~k~g~~~~~~~~~~~e~~ 429 (429) T protein:vir:10 401 MLPIDMAGQAYLKGGDTNGEVSKEGNEGN 429 (429) T ss_pred ccchhhccccccCCCCCCCCCCCCCCCCC Confidence 99999999889999999999999999999 No 2 >protein:vir:107605 Length: 432 # NCBI annotation: phage portal protein, HK97 family # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:1491 # MgeName: Gamma # Cross-refs: genbank:acc:YP_338186;genbank:gi:77020175;genbank:GeneID:3703736 Probab=100.00 E-value=1.2e-111 Score=628.65 Aligned_cols=429 Identities=99% Similarity=1.411 Sum_probs=411.5 Q ss_pred Cchhhhh---hcccccccccccccCCchHHHHHhhcCCCCcceechhhhhccHHHHHHHHHHHHhhccCceEEEecCCce Q lcl|Aclame:pro 1 MDSVKKF---FNFEKRQTSQVIELNKDDEKLLEWLGISPSTISVKGKNALKVATVFACIKILSESVSKLPLKIYQEDEYG 77 (429) Q Consensus 1 Mg~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~ 77 (429) ||||+|+ |++++|++.+....+...+.+..|+|.+.+.+.++.+.|+++++||+||++||++||++||+++++++++ T Consensus 1 M~~~~r~~~~~~~~~r~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~al~~~~v~~~i~~ia~~ia~lp~~~~~~~~~~ 80 (432) T protein:vir:10 1 MKIVDSVKKFFNFEKRQTSQVIELNKDDEKLLEWLGISPSTISVKGKNALKVATVFACIKILSESVSKLPLKIYQEDEYG 80 (432) T ss_pred CChHHHHHHhcCccccCcccccccCCchHHHHHHhCCCcCccccchhhhhccHHHHHHHHHHHHhhccCceEEEEecCCc Confidence 9999885 4556677667777788889999999999999999999999999999999999999999999999999888 Q ss_pred eeeeecchhhhhhcccCcCCCCHHHHHHHHHHHHHhhCCeEEEEeeCCCCceEEEEeeCCcceEEEEcCCcceeeeeeEE Q lcl|Aclame:pro 78 IQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVYIDDVGLLNSKTKMW 157 (429) Q Consensus 78 ~~~~~~~~~~~~l~~~PN~~~s~~~~~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~l~p~~v~~~~~~~~~~~~~~~~~ 157 (429) ......|+++++|+.+||++||+++||+.++.+++++||+|++++++..|++.+|||++|++|++..++.+........+ T Consensus 81 ~~~~~~~~l~~lL~~~PN~~~t~~~f~~~~~~~lll~Gnay~~i~r~~~G~~~~L~~i~~~~v~v~~d~~~~~~~~~~~~ 160 (432) T protein:vir:10 81 IQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVYIDDVGLLNSKTKMW 160 (432) T ss_pred eeeccccHHHHHHHhhccCCCCHHHHHHHHHHHHhhcCCeEEEEEECCCCcEEEEEEEcCceeEEEEcCcccccccceEE Confidence 88888999999999999999999999999999999999999999999999999999999999999999887777777788 Q ss_pred EeecccCceEEEccceEEEeecCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHHccCCcceEEEeCCCCCHHHHHHH Q lcl|Aclame:pro 158 YVVNTGGQQRVLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGDLNEDAKKVF 237 (429) Q Consensus 158 ~~~~~~g~~~~~~~~evih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~~e~~~~~ 237 (429) |.+..+|..+.|+++||||||++++.++++|+||+.++..++..+.+++++..++|+||++|+|+++++..+++++.+++ T Consensus 161 y~~~~~g~~~~~~~~eiih~r~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~p~gil~~~~~l~~e~~~~~ 240 (432) T protein:vir:10 161 YVVNTGGQQRVLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGDLNEDAKKVF 240 (432) T ss_pred EEEecCCeEEEEccccEEEecCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhccCCccEEEEcCCCCCHHHHHHH Confidence 88889999999999999999988889999999999999999999999999999999999999999999999999999999 Q ss_pred HHHHHHHhcccccccceeecCCCceeEecCCChhHHHHHHHHHHHHHHHHHHhcCChhhcCCccccccccHHHHHHHHHH Q lcl|Aclame:pro 238 RENFESMSSGLQNSHRIALMPVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKATLNNIEQQQQQFYT 317 (429) Q Consensus 238 ~~~~~~~~~g~~~~~~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~fgvp~~~l~~~~~~~~~n~~~~~~~~~~ 317 (429) ++.|++.++|..|+|+++|+++|++|+++++++.|++++|.+++++++||++|||||.+||..+.++++|.+++.++|++ T Consensus 241 ~~~~~~~~~g~~n~~~~~vl~~g~~~~~l~~~~~d~q~~e~~~~~~~~Ia~~fgVP~~~lg~~~~~~~s~~e~~~~~~~~ 320 (432) T protein:vir:10 241 RENFESMSSGLQNSHRIALMPVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKATLNNIEQQQQQFYT 320 (432) T ss_pred HHHHHHHhcccccCCcceecCCCceEEEccCChhHHHHHHHHHHHHHHHHHHhCCCHHHhCCCCCCCcccHHHHHHHHHH Confidence 99999999999999999999999999999999999999999999999999999999999999889999999999999999 Q ss_pred HHHhHHHHHHHHHHHHhhccchhhcchhhhhhhhhhHhhhhHHHHHHHHHHHHhCCCCCHHHHHHHhCCCCCCCcceeee Q lcl|Aclame:pro 318 DTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEAGGDRLLV 397 (429) Q Consensus 318 ~~l~P~~~~i~~~l~~~ll~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~Gl~~~~~gD~~~~ 397 (429) +||.|+++.|+++|+++||+..++..+++++||.+.+++.|.+++++++.+++++|++|+||+|+++|+||+||||++++ T Consensus 321 ~~l~P~~~~ie~~ln~kLl~~~~~~~g~~~~fd~~~l~~~d~~~~~~~~~~~~~~G~~t~NE~R~~~g~~pi~ggD~~~~ 400 (432) T protein:vir:10 321 DTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEAGGDRLLV 400 (432) T ss_pred HHHHHHHHHHHHHHHHhhcChhhcCCCcEEEeechhhhcCCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCeEee Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred ccccccccccccccCCCCCCCCCCCCCCCCCC Q lcl|Aclame:pro 398 NGNMLPIDMAGQAYLKGGDTNGEVSKEGNEGN 429 (429) Q Consensus 398 ~~n~~~~~~~~~~~~~~g~~~~~~~~~~~~~n 429 (429) |+|++|++..++...++|+++++..++++||| T Consensus 401 ~~n~~~~~~~~~~~~k~~~~~~~~~~~~~~~~ 432 (432) T protein:vir:10 401 NGNMLPIDMAGQAYLKGGDTNGEVSKEGNEGN 432 (432) T ss_pred cccccchhhccccccCCCCCCCCCCCCCCCCC Confidence 99999999999999999999999999999999 No 3 >protein:vir:105002 Length: 432 # NCBI annotation: putative phage portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:1490 # MgeName: W Beta # Cross-refs: genbank:acc:YP_459967;genbank:gi:85701382;genbank:GeneID:3882143 Probab=100.00 E-value=1.2e-111 Score=628.65 Aligned_cols=429 Identities=99% Similarity=1.411 Sum_probs=411.5 Q ss_pred Cchhhhh---hcccccccccccccCCchHHHHHhhcCCCCcceechhhhhccHHHHHHHHHHHHhhccCceEEEecCCce Q lcl|Aclame:pro 1 MDSVKKF---FNFEKRQTSQVIELNKDDEKLLEWLGISPSTISVKGKNALKVATVFACIKILSESVSKLPLKIYQEDEYG 77 (429) Q Consensus 1 Mg~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~ 77 (429) ||||+|+ |++++|++.+....+...+.+..|+|.+.+.+.++.+.|+++++||+||++||++||++||+++++++++ T Consensus 1 M~~~~r~~~~~~~~~r~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~al~~~~v~~~i~~ia~~ia~lp~~~~~~~~~~ 80 (432) T protein:vir:10 1 MKIVDSVKKFFNFEKRQTSQVIELNKDDEKLLEWLGISPSTISVKGKNALKVATVFACIKILSESVSKLPLKIYQEDEYG 80 (432) T ss_pred CChHHHHHHhcCccccCcccccccCCchHHHHHHhCCCcCccccchhhhhccHHHHHHHHHHHHhhccCceEEEEecCCc Confidence 9999885 4556677667777788889999999999999999999999999999999999999999999999999888 Q ss_pred eeeeecchhhhhhcccCcCCCCHHHHHHHHHHHHHhhCCeEEEEeeCCCCceEEEEeeCCcceEEEEcCCcceeeeeeEE Q lcl|Aclame:pro 78 IQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVYIDDVGLLNSKTKMW 157 (429) Q Consensus 78 ~~~~~~~~~~~~l~~~PN~~~s~~~~~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~l~p~~v~~~~~~~~~~~~~~~~~ 157 (429) ......|+++++|+.+||++||+++||+.++.+++++||+|++++++..|++.+|||++|++|++..++.+........+ T Consensus 81 ~~~~~~~~l~~lL~~~PN~~~t~~~f~~~~~~~lll~Gnay~~i~r~~~G~~~~L~~i~~~~v~v~~d~~~~~~~~~~~~ 160 (432) T protein:vir:10 81 IQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVYIDDVGLLNSKTKMW 160 (432) T ss_pred eeeccccHHHHHHHhhccCCCCHHHHHHHHHHHHhhcCCeEEEEEECCCCcEEEEEEEcCceeEEEEcCcccccccceEE Confidence 88888999999999999999999999999999999999999999999999999999999999999999887777777788 Q ss_pred EeecccCceEEEccceEEEeecCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHHccCCcceEEEeCCCCCHHHHHHH Q lcl|Aclame:pro 158 YVVNTGGQQRVLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGDLNEDAKKVF 237 (429) Q Consensus 158 ~~~~~~g~~~~~~~~evih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~~e~~~~~ 237 (429) |.+..+|..+.|+++||||||++++.++++|+||+.++..++..+.+++++..++|+||++|+|+++++..+++++.+++ T Consensus 161 y~~~~~g~~~~~~~~eiih~r~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~p~gil~~~~~l~~e~~~~~ 240 (432) T protein:vir:10 161 YVVNTGGQQRVLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGDLNEDAKKVF 240 (432) T ss_pred EEEecCCeEEEEccccEEEecCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhccCCccEEEEcCCCCCHHHHHHH Confidence 88889999999999999999988889999999999999999999999999999999999999999999999999999999 Q ss_pred HHHHHHHhcccccccceeecCCCceeEecCCChhHHHHHHHHHHHHHHHHHHhcCChhhcCCccccccccHHHHHHHHHH Q lcl|Aclame:pro 238 RENFESMSSGLQNSHRIALMPVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKATLNNIEQQQQQFYT 317 (429) Q Consensus 238 ~~~~~~~~~g~~~~~~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~fgvp~~~l~~~~~~~~~n~~~~~~~~~~ 317 (429) ++.|++.++|..|+|+++|+++|++|+++++++.|++++|.+++++++||++|||||.+||..+.++++|.+++.++|++ T Consensus 241 ~~~~~~~~~g~~n~~~~~vl~~g~~~~~l~~~~~d~q~~e~~~~~~~~Ia~~fgVP~~~lg~~~~~~~s~~e~~~~~~~~ 320 (432) T protein:vir:10 241 RENFESMSSGLQNSHRIALMPVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKATLNNIEQQQQQFYT 320 (432) T ss_pred HHHHHHHhcccccCCcceecCCCceEEEccCChhHHHHHHHHHHHHHHHHHHhCCCHHHhCCCCCCCcccHHHHHHHHHH Confidence 99999999999999999999999999999999999999999999999999999999999999889999999999999999 Q ss_pred HHHhHHHHHHHHHHHHhhccchhhcchhhhhhhhhhHhhhhHHHHHHHHHHHHhCCCCCHHHHHHHhCCCCCCCcceeee Q lcl|Aclame:pro 318 DTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEAGGDRLLV 397 (429) Q Consensus 318 ~~l~P~~~~i~~~l~~~ll~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~Gl~~~~~gD~~~~ 397 (429) +||.|+++.|+++|+++||+..++..+++++||.+.+++.|.+++++++.+++++|++|+||+|+++|+||+||||++++ T Consensus 321 ~~l~P~~~~ie~~ln~kLl~~~~~~~g~~~~fd~~~l~~~d~~~~~~~~~~~~~~G~~t~NE~R~~~g~~pi~ggD~~~~ 400 (432) T protein:vir:10 321 DTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEAGGDRLLV 400 (432) T ss_pred HHHHHHHHHHHHHHHHhhcChhhcCCCcEEEeechhhhcCCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCeEee Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred ccccccccccccccCCCCCCCCCCCCCCCCCC Q lcl|Aclame:pro 398 NGNMLPIDMAGQAYLKGGDTNGEVSKEGNEGN 429 (429) Q Consensus 398 ~~n~~~~~~~~~~~~~~g~~~~~~~~~~~~~n 429 (429) |+|++|++..++...++|+++++..++++||| T Consensus 401 ~~n~~~~~~~~~~~~k~~~~~~~~~~~~~~~~ 432 (432) T protein:vir:10 401 NGNMLPIDMAGQAYLKGGDTNGEVSKEGNEGN 432 (432) T ss_pred cccccchhhccccccCCCCCCCCCCCCCCCCC Confidence 99999999999999999999999999999999 No 4 >protein:vir:102855 Length: 432 # NCBI annotation: phage portal protein, HK97 family # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:1492 # MgeName: Cherry # Cross-refs: genbank:acc:YP_338135;genbank:gi:77020228;genbank:GeneID:3703764 Probab=100.00 E-value=1.2e-111 Score=628.65 Aligned_cols=429 Identities=99% Similarity=1.411 Sum_probs=411.5 Q ss_pred Cchhhhh---hcccccccccccccCCchHHHHHhhcCCCCcceechhhhhccHHHHHHHHHHHHhhccCceEEEecCCce Q lcl|Aclame:pro 1 MDSVKKF---FNFEKRQTSQVIELNKDDEKLLEWLGISPSTISVKGKNALKVATVFACIKILSESVSKLPLKIYQEDEYG 77 (429) Q Consensus 1 Mg~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~ 77 (429) ||||+|+ |++++|++.+....+...+.+..|+|.+.+.+.++.+.|+++++||+||++||++||++||+++++++++ T Consensus 1 M~~~~r~~~~~~~~~r~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~al~~~~v~~~i~~ia~~ia~lp~~~~~~~~~~ 80 (432) T protein:vir:10 1 MKIVDSVKKFFNFEKRQTSQVIELNKDDEKLLEWLGISPSTISVKGKNALKVATVFACIKILSESVSKLPLKIYQEDEYG 80 (432) T ss_pred CChHHHHHHhcCccccCcccccccCCchHHHHHHhCCCcCccccchhhhhccHHHHHHHHHHHHhhccCceEEEEecCCc Confidence 9999885 4556677667777788889999999999999999999999999999999999999999999999999888 Q ss_pred eeeeecchhhhhhcccCcCCCCHHHHHHHHHHHHHhhCCeEEEEeeCCCCceEEEEeeCCcceEEEEcCCcceeeeeeEE Q lcl|Aclame:pro 78 IQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVYIDDVGLLNSKTKMW 157 (429) Q Consensus 78 ~~~~~~~~~~~~l~~~PN~~~s~~~~~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~l~p~~v~~~~~~~~~~~~~~~~~ 157 (429) ......|+++++|+.+||++||+++||+.++.+++++||+|++++++..|++.+|||++|++|++..++.+........+ T Consensus 81 ~~~~~~~~l~~lL~~~PN~~~t~~~f~~~~~~~lll~Gnay~~i~r~~~G~~~~L~~i~~~~v~v~~d~~~~~~~~~~~~ 160 (432) T protein:vir:10 81 IQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVYIDDVGLLNSKTKMW 160 (432) T ss_pred eeeccccHHHHHHHhhccCCCCHHHHHHHHHHHHhhcCCeEEEEEECCCCcEEEEEEEcCceeEEEEcCcccccccceEE Confidence 88888999999999999999999999999999999999999999999999999999999999999999887777777788 Q ss_pred EeecccCceEEEccceEEEeecCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHHccCCcceEEEeCCCCCHHHHHHH Q lcl|Aclame:pro 158 YVVNTGGQQRVLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGDLNEDAKKVF 237 (429) Q Consensus 158 ~~~~~~g~~~~~~~~evih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~~e~~~~~ 237 (429) |.+..+|..+.|+++||||||++++.++++|+||+.++..++..+.+++++..++|+||++|+|+++++..+++++.+++ T Consensus 161 y~~~~~g~~~~~~~~eiih~r~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~p~gil~~~~~l~~e~~~~~ 240 (432) T protein:vir:10 161 YVVNTGGQQRVLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGDLNEDAKKVF 240 (432) T ss_pred EEEecCCeEEEEccccEEEecCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhccCCccEEEEcCCCCCHHHHHHH Confidence 88889999999999999999988889999999999999999999999999999999999999999999999999999999 Q ss_pred HHHHHHHhcccccccceeecCCCceeEecCCChhHHHHHHHHHHHHHHHHHHhcCChhhcCCccccccccHHHHHHHHHH Q lcl|Aclame:pro 238 RENFESMSSGLQNSHRIALMPVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKATLNNIEQQQQQFYT 317 (429) Q Consensus 238 ~~~~~~~~~g~~~~~~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~fgvp~~~l~~~~~~~~~n~~~~~~~~~~ 317 (429) ++.|++.++|..|+|+++|+++|++|+++++++.|++++|.+++++++||++|||||.+||..+.++++|.+++.++|++ T Consensus 241 ~~~~~~~~~g~~n~~~~~vl~~g~~~~~l~~~~~d~q~~e~~~~~~~~Ia~~fgVP~~~lg~~~~~~~s~~e~~~~~~~~ 320 (432) T protein:vir:10 241 RENFESMSSGLQNSHRIALMPVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKATLNNIEQQQQQFYT 320 (432) T ss_pred HHHHHHHhcccccCCcceecCCCceEEEccCChhHHHHHHHHHHHHHHHHHHhCCCHHHhCCCCCCCcccHHHHHHHHHH Confidence 99999999999999999999999999999999999999999999999999999999999999889999999999999999 Q ss_pred HHHhHHHHHHHHHHHHhhccchhhcchhhhhhhhhhHhhhhHHHHHHHHHHHHhCCCCCHHHHHHHhCCCCCCCcceeee Q lcl|Aclame:pro 318 DTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEAGGDRLLV 397 (429) Q Consensus 318 ~~l~P~~~~i~~~l~~~ll~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~Gl~~~~~gD~~~~ 397 (429) +||.|+++.|+++|+++||+..++..+++++||.+.+++.|.+++++++.+++++|++|+||+|+++|+||+||||++++ T Consensus 321 ~~l~P~~~~ie~~ln~kLl~~~~~~~g~~~~fd~~~l~~~d~~~~~~~~~~~~~~G~~t~NE~R~~~g~~pi~ggD~~~~ 400 (432) T protein:vir:10 321 DTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEAGGDRLLV 400 (432) T ss_pred HHHHHHHHHHHHHHHHhhcChhhcCCCcEEEeechhhhcCCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCeEee Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred ccccccccccccccCCCCCCCCCCCCCCCCCC Q lcl|Aclame:pro 398 NGNMLPIDMAGQAYLKGGDTNGEVSKEGNEGN 429 (429) Q Consensus 398 ~~n~~~~~~~~~~~~~~g~~~~~~~~~~~~~n 429 (429) |+|++|++..++...++|+++++..++++||| T Consensus 401 ~~n~~~~~~~~~~~~k~~~~~~~~~~~~~~~~ 432 (432) T protein:vir:10 401 NGNMLPIDMAGQAYLKGGDTNGEVSKEGNEGN 432 (432) T ss_pred cccccchhhccccccCCCCCCCCCCCCCCCCC Confidence 99999999999999999999999999999999 No 5 >protein:vir:81152 Length: 411 # NCBI annotation: putative portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:1892 # MgeName: Geobacillus virus E2 # Cross-refs: genbank:acc:YP_001285809;genbank:gi:148747730;genbank:GeneID:5247195 Probab=100.00 E-value=4.4e-104 Score=587.23 Aligned_cols=409 Identities=41% Similarity=0.734 Sum_probs=375.1 Q ss_pred CchhhhhhcccccccccccccCCchHHHHHhhcCCCCcceechhhhhccHHHHHHHHHHHHhhccCceEEEecCCceeee Q lcl|Aclame:pro 1 MDSVKKFFNFEKRQTSQVIELNKDDEKLLEWLGISPSTISVKGKNALKVATVFACIKILSESVSKLPLKIYQEDEYGIQR 80 (429) Q Consensus 1 Mg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~~~~ 80 (429) ||||+++++++++... .. ....+.+..|+|.. .++.+.|+++++|++||++||++||++|+++++.++++... T Consensus 1 MG~~~~~~~~~~~~~~-~~--~~~~~~~~~~~g~~----~~~~~~al~~~~V~~~v~~Ia~~iA~lp~~~~~~~~~~~~~ 73 (411) T protein:vir:81 1 MGWWSRLTRFFRPRNE-TV--DMTNPLLLQWLGVD----PDTPRNQLSEATYFACLKILSESLGKLPLKMYQKTERGIVK 73 (411) T ss_pred CchHHHHHhhccCccc-cc--ccchHHHHHHhcCc----ccChhhhhccHHHHHHHHHHHHhHhhCceeEEEecCCceee Confidence 9999999887765432 22 23345677777643 35778899999999999999999999999999999888888 Q ss_pred eecchhhhhhcccCcCCCCHHHHHHHHHHHHHhhCCeEEEEeeCCCCceEEEEeeCCcceEEEEcCCcceeeeee--EEE Q lcl|Aclame:pro 81 GTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVYIDDVGLLNSKTK--MWY 158 (429) Q Consensus 81 ~~~~~~~~~l~~~PN~~~s~~~~~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~l~p~~v~~~~~~~~~~~~~~~--~~~ 158 (429) ...|+++++|+.+||++||+++||+.++.+++++||||++++++ .|++.+|||++|+.|++..++.+....... +.+ T Consensus 74 ~~~~~l~~lL~~~PN~~~t~~~f~~~l~~~lll~Gna~~~i~r~-~g~~~~l~~l~~~~v~~~~~~~~~~~~~~~~~~~~ 152 (411) T protein:vir:81 74 SDREELYNLLKLRPNPYMTSSVFWSTVEMNRNHYGNAYVWCQYS-GPQLQALWILPSQYVTIVVDDRGLLGEKNAIWYRY 152 (411) T ss_pred ecccHHHHHHhhccCCCCCHHHHHHHHHHHHhhcCCeEEEEEec-CCceEEEEEECCceEEEEEcCcccccccceEEEEE Confidence 88899999999999999999999999999999999999999998 689999999999999999987655433333 233 Q ss_pred eecccCceEEEccceEEEeecCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHHccCCcceEEEeCCCCCHHHHHHHH Q lcl|Aclame:pro 159 VVNTGGQQRVLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGDLNEDAKKVFR 238 (429) Q Consensus 159 ~~~~~g~~~~~~~~evih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~~e~~~~~~ 238 (429) ....+|..+.|+++||||||++++.++.+|+||+.++..++.+..+++++..++|+||++|+|+++++..+++++.++++ T Consensus 153 ~~~~~g~~~~~~~~eiih~k~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~f~ng~~p~gil~~~~~l~~e~~~~~~ 232 (411) T protein:vir:81 153 NDPYDGKMYVFRNDEILHFKTSVTFDGITGLSVRDVLKHTVDGALESQKFMNNLYKTGLTGKAVLEYTGDLNQEARDRLV 232 (411) T ss_pred EecCCceEEEEccccEEEEcCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEeCCCCCHHHHHHHH Confidence 44457888899999999999888889999999999999999999999999999999999999999999999999999999 Q ss_pred HHHHHHhcccccccceeecCCCceeEecCCChhHHHHHHHHHHHHHHHHHHhcCChhhcCCccccccccHHHHHHHHHHH Q lcl|Aclame:pro 239 ENFESMSSGLQNSHRIALMPVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKATLNNIEQQQQQFYTD 318 (429) Q Consensus 239 ~~~~~~~~g~~~~~~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~fgvp~~~l~~~~~~~~~n~~~~~~~~~~~ 318 (429) ++|++.++|.+|+|+++++++|++|+++++++.|+|++|.+++.+++||++|||||.+||..+.++++|.+++.++|+++ T Consensus 233 ~~~~~~~~g~~n~g~~~vl~~g~~~~~l~~~~~d~q~~e~~~~~~~~Ia~~fgVPp~~lg~~~~~t~~n~e~~~~~f~~~ 312 (411) T protein:vir:81 233 KGFEQFANGSKNAGKIIPVPLGMKLVPLDIKLTDSQFFELKKYTALQIAAAFGIKPNQINDYEKSSYASAEAQNLAFYVD 312 (411) T ss_pred HHHHHHhcCccccCCceecCCCceEEEccCCHHHHHHHHHHHHHHHHHHHHhCCCHHHhCCCCCCCchhHHHHHHHHHHH Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred HHhHHHHHHHHHHHHhhccchhhcchhhhhhhhhhHhhhhHHHHHHHHHHHHhCCCCCHHHHHHHhCCCCCCCcceeeec Q lcl|Aclame:pro 319 TLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEAGGDRLLVN 398 (429) Q Consensus 319 ~l~P~~~~i~~~l~~~ll~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~Gl~~~~~gD~~~~~ 398 (429) ||.|+++.||++|+++||++.++..+++++||++.+++.|.+++++.+.+++.+|++|+||+|+++|+||+||||+++++ T Consensus 313 ~l~P~~~~ie~~l~~~ll~~~~~~~~~~~~fd~~~ll~~d~~~~~~~~~~~~~~g~~t~NE~R~~~gl~p~~ggD~~~~~ 392 (411) T protein:vir:81 313 TLLYVLKQYEEEITYKILSNDLISQGHYFKFNVNVILRADIKTQMDSLSTAVQNGIMTPNEARDYLDMPADDYGNNLMAN 392 (411) T ss_pred HHHHHHHHHHHHHHhhcCChhhcCCCcEEEeechhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCeeeec Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred cccccccccccccCCCCCC Q lcl|Aclame:pro 399 GNMLPIDMAGQAYLKGGDT 417 (429) Q Consensus 399 ~n~~~~~~~~~~~~~~g~~ 417 (429) +|++|++..+++..+|||. T Consensus 393 ~n~~pl~~~~~~~~kgGd~ 411 (411) T protein:vir:81 393 GNYIPLSMLGANYGKGGDS 411 (411) T ss_pred cCccchhhhhhhhccCCCC Confidence 9999999888777777776 No 6 >protein:vir:1380 Length: 422 # NCBI annotation: putative portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:314 # MgeName: phi3626 # Cross-refs: genbank:acc:NP_612832;genbank:gi:20065966;genbank:GeneID:935782 Probab=100.00 E-value=6.5e-103 Score=580.83 Aligned_cols=415 Identities=53% Similarity=0.900 Sum_probs=375.6 Q ss_pred Cchhhhhhcccccccccc------cccCCchHHHHHhhcCCCCcceechhhhhccHHHHHHHHHHHHhhccCceEEEecC Q lcl|Aclame:pro 1 MDSVKKFFNFEKRQTSQV------IELNKDDEKLLEWLGISPSTISVKGKNALKVATVFACIKILSESVSKLPLKIYQED 74 (429) Q Consensus 1 Mg~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~ 74 (429) ||||+++|+..+...... .........+..++|. .....++.+.|+++++|++||++||+.||++|+++++.+ T Consensus 1 MG~f~~lf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~~~~v~~~~al~~~~v~~ci~~ia~~iA~lp~~~~~~~ 79 (422) T protein:vir:13 1 MGFLRGLFNKKNNNDEKRSNYDEDIGIDISDSNFWEKFGI-KLNFSVRGKRALKENTVYVCTKIRAESIGKLSLKIYKDK 79 (422) T ss_pred CchhhhhhhccCCccchhhhhhhccccccCcchhhhhccc-cCCcccchhhhhccHHHHHHHHHHHHhhhhCceEEEecC Confidence 999999997554332111 1112233344455554 445578899999999999999999999999999999865 Q ss_pred CceeeeeecchhhhhhcccCcCCCCHHHHHHHHHHHHHhhCCeEEEEeeCCCCceEEEEeeCCcceEEEEcCCcceeeee Q lcl|Aclame:pro 75 EYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVYIDDVGLLNSKT 154 (429) Q Consensus 75 ~~~~~~~~~~~~~~~l~~~PN~~~s~~~~~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~l~p~~v~~~~~~~~~~~~~~ 154 (429) ++ ...|+++++|+.+||++||+++||+.++.+++++||+|++++|+..|++.+|+|++|++|++..+.++...... T Consensus 80 ~~----~~~~~~~~lL~~~PN~~~t~~~f~~~~~~~lll~Gna~~~i~r~~~G~~~~L~~i~~~~v~~~~~~~~~~~~~~ 155 (422) T protein:vir:13 80 EE----YKEHELYYLLRYKPNPLMSSINFWKCLETQRTLKGNAYAYIERDRKGKIIGLYPINSDNVTKIIDDDNFLSSLS 155 (422) T ss_pred cc----cccchHHHHHhhhcccCCCHHHHHHHHHHHHhhcCCeEEEEEECCCCcEEEEEEECCcceEEEEcCCcceeccc Confidence 44 33589999999999999999999999999999999999999999999999999999999999998876554333 Q ss_pred e-EEEeecccCceEEEccceEEEeecCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHHccCCcceEEEeCCCCCHHH Q lcl|Aclame:pro 155 K-MWYVVNTGGQQRVLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGDLNEDA 233 (429) Q Consensus 155 ~-~~~~~~~~g~~~~~~~~evih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~~e~ 233 (429) . .|.....+|....|++++|||++.+++.++.+|.||+..+..++.++.++++++.++|+||++|+|++++++.+++++ T Consensus 156 ~~~y~~~~~~g~~~~~~~~eiih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~f~ng~~p~gil~~~~~l~~e~ 235 (422) T protein:vir:13 156 KVWYVVTDKNGKEHKLLPDEMLHFIGDITLDGLIGIKPLDYLRCTIENGRATQEFINKFFKNGLSIKGIVQYVGDLDEKA 235 (422) T ss_pred eEEEEEEeCCCeEEEEcccceEEEcCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhccCCccEEEEeCCCCCHHH Confidence 3 344455678888999999999998888899999999999999999999999999999999999999999999999999 Q ss_pred HHHHHHHHHHHhcccccccceeecCCCceeEecCCChhHHHHHHHHHHHHHHHHHHhcCChhhcCCccccccccHHHHHH Q lcl|Aclame:pro 234 KKVFRENFESMSSGLQNSHRIALMPVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKATLNNIEQQQQ 313 (429) Q Consensus 234 ~~~~~~~~~~~~~g~~~~~~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~fgvp~~~l~~~~~~~~~n~~~~~~ 313 (429) .+++++.|++.++|..|+++++|+++|++|++++.++.|+|++|.+++++++||++|||||.+|+..+.++++|.+++.+ T Consensus 236 ~~~~~~~~~~~~~g~~n~~~~~vl~~g~~~~~l~~~~~d~q~le~~~~~~~~Ia~~fgVpp~~lg~~~~~~~sn~e~~~~ 315 (422) T protein:vir:13 236 KKIFKKEFESMSNGLENAHSISLLPFGYQFQPISLSMADAQFLENSKLTKRELAATFGMKSYHLNDLERATFNNLTEQQK 315 (422) T ss_pred HHHHHHHHHHHhcCccccCCceecCCCceeeeccCChhHHHHHHHHHHHHHHHHHHhCCCHHHhCCCCCCCcccHHHHHH Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred HHHHHHHhHHHHHHHHHHHHhhccchhhcchhhhhhhhhhHhhhhHHHHHHHHHHHHhCCCCCHHHHHHHhCCCCCCCcc Q lcl|Aclame:pro 314 QFYTDTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEAGGD 393 (429) Q Consensus 314 ~~~~~~l~P~~~~i~~~l~~~ll~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~Gl~~~~~gD 393 (429) .|+++||.|++++||++|+++||++.++..+++++||++.+++.|.+++++.+.+++++|++|+||+|+++|+||+|||| T Consensus 316 ~f~~~~l~P~~~~ie~~l~~~Ll~~~~~~~g~~i~fd~~~l~r~d~~~~~~~~~~~~~~G~~T~NE~R~~~gl~p~~ggD 395 (422) T protein:vir:13 316 DFYVTTLQSSLTVYEQEIQDKLFSQYETLQDVKAEFNVDTILRSDIKTRYEAYRIGIQGGFIEANEARRRENLPPVEGGD 395 (422) T ss_pred HHHHHHHHHHHHHHHHHHHHhhCChhhhcCCceEEeechhhhcCCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCcC Confidence 99999999999999999999999999988899999999999999999999999999999999999999999999999999 Q ss_pred eeeeccccccccccccccCCCCCCCCC Q lcl|Aclame:pro 394 RLLVNGNMLPIDMAGQAYLKGGDTNGE 420 (429) Q Consensus 394 ~~~~~~n~~~~~~~~~~~~~~g~~~~~ 420 (429) ++++++|++|++..++++.+||+++++ T Consensus 396 ~~~~~~n~~~l~~~~~~~~~~g~~~g~ 422 (422) T protein:vir:13 396 RLLVNGNMIPIEMAGEQYKKGGEKGGK 422 (422) T ss_pred eeeeccCccchhhcccccccCCCcCCC Confidence 999999999999999888888888887 No 7 >protein:vir:102118 Length: 409 # NCBI annotation: phage portal protein, HK97 family # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:1641 # MgeName: phiSM101 # Cross-refs: genbank:acc:YP_699943;genbank:gi:110804051;genbank:GeneID:4206661 Probab=100.00 E-value=2.3e-101 Score=572.37 Aligned_cols=408 Identities=56% Similarity=0.973 Sum_probs=372.7 Q ss_pred CchhhhhhcccccccccccccCCchHHHHHhhcCCCCcceechhhhhccHHHHHHHHHHHHhhccCceEEEecCCceeee Q lcl|Aclame:pro 1 MDSVKKFFNFEKRQTSQVIELNKDDEKLLEWLGISPSTISVKGKNALKVATVFACIKILSESVSKLPLKIYQEDEYGIQR 80 (429) Q Consensus 1 Mg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~~~~ 80 (429) |-+ ++.|+. +++ ..+.++..+..|+|.+.+...++.+.|+++++|++||++||++||++||++++.+++ ... T Consensus 1 m~f-~~~~~~----~~~--~~~~~~~~~~~~~g~~~~~~~v~~~~al~~~~v~~~i~~ia~~ia~lp~~~~~~~~~-~~~ 72 (409) T protein:vir:10 1 MLF-RKGFKN----QSQ--EISIDDKKILEWLGINPSETYVNGKSCLKQATVFGCIRILSDNISKLPIKIYQKKDG-IKR 72 (409) T ss_pred Ccc-cccccC----cCC--CCCCChHHHHHHhcCCcCcceechhhhhccHHHHHHHHHHHHhhhhCceEEEEecCC-eee Confidence 763 333321 222 234556778899999999999999999999999999999999999999999987544 455 Q ss_pred eecchhhhhhcccCcCCCCHHHHHHHHHHHHHhhCCeEEEEeeCCCCceEEEEeeCCcceEEEEcCCcceeeeee-EEEe Q lcl|Aclame:pro 81 GTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVYIDDVGLLNSKTK-MWYV 159 (429) Q Consensus 81 ~~~~~~~~~l~~~PN~~~s~~~~~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~l~p~~v~~~~~~~~~~~~~~~-~~~~ 159 (429) ...|+++++|+.+||++||+++||+.++.+++++||+|++++++..|.+.+|||++|++|++..+.++....... .|.+ T Consensus 73 ~~~~~l~~lL~~~PN~~~t~~~f~~~~~~~lll~Gna~~~i~r~~~G~~~~L~~i~~~~V~v~~~~~~~~~~~~~~~y~~ 152 (409) T protein:vir:10 73 VPDHYLEYLLKLRPNPYMSSSDFWKCIEVQRNIYGNAYVALDFKKNGEIKGLYPLKSDGMKIFVDDTGLLNSENNVWYLY 152 (409) T ss_pred ccCchHHHHHhhccCCCCCHHHHHHHHHHHHhhcCCeEEEEEEcCCCcEEEEEEEcCCceEEEEcCCccccccceEEEEE Confidence 667999999999999999999999999999999999999999999999999999999999999987665544333 3444 Q ss_pred ecccCceEEEccceEEEeecCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHHccCCcceEEEeCCCCCHHHHHHHHH Q lcl|Aclame:pro 160 VNTGGQQRVLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGDLNEDAKKVFRE 239 (429) Q Consensus 160 ~~~~g~~~~~~~~evih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~~e~~~~~~~ 239 (429) ...+|..+.|+++||||+|+++ .++.+|+||+.++...+....++++++.++|+||++|+|++++++.+++++.+++++ T Consensus 153 ~~~~g~~~~~~~~evih~r~~~-~d~~~G~s~i~~~~~~i~~~~~~~~~~~~~f~ng~~~~gil~~~~~l~~e~~~~~~~ 231 (409) T protein:vir:10 153 TDDLGQRHKFMSDEILHFKGLT-ADGLAGLSVIELLNHLIENGKSSETYLNNFFKNGLQVKGLVQYAGDLNPEAEEVFKE 231 (409) T ss_pred EeCCceeEEeccccEEEecCcC-CCCcccccHHHHHHHHHHHHHHHHHHHHHHHhccCCCcEEEEcCCCCCHHHHHHHHH Confidence 5566888899999999999765 467899999999999999999999999999999999999999999999999999999 Q ss_pred HHHHHhcccccccceeecCCCceeEecCCChhHHHHHHHHHHHHHHHHHHhcCChhhcCCccccccccHHHHHHHHHHHH Q lcl|Aclame:pro 240 NFESMSSGLQNSHRIALMPVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKATLNNIEQQQQQFYTDT 319 (429) Q Consensus 240 ~~~~~~~g~~~~~~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~fgvp~~~l~~~~~~~~~n~~~~~~~~~~~~ 319 (429) .|++.++|..|+|+++|+++|++|++++.++.|+|++|.+++++++||++|||||.+|+..+.++++|.+++.+.|+++| T Consensus 232 ~~~~~~~g~~n~~~~~vl~~g~~~~~l~~~~~d~q~~e~~~~~~~~Ia~~fgVPp~~lg~~~~~~~~~~e~~~~~f~~~~ 311 (409) T protein:vir:10 232 NFERMSSGLKNAHRIAMLPIGYKFEPISQKLVDAQFLENSQLTIRQIASVFGVKMHQLNDLDRATHSNITEQNREFYIDT 311 (409) T ss_pred HHHHHhccccccCCceecCCCceEEEccCChhhHHHHHHHHHHHHHHHHHhCCCHHHcCCCCCCccccHHHHHHHHHHHH Confidence 99999999999999999999999999999999999999999999999999999999999988899999999999999999 Q ss_pred HhHHHHHHHHHHHHhhccchhhcchhhhhhhhhhHhhhhHHHHHHHHHHHHhCCCCCHHHHHHHhCCCCCCCcceeeecc Q lcl|Aclame:pro 320 LQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEAGGDRLLVNG 399 (429) Q Consensus 320 l~P~~~~i~~~l~~~ll~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~Gl~~~~~gD~~~~~~ 399 (429) |.|+++.||++|+++|++..++..+++++||++++++.|.+++++.+.+++++|++|+||+|+++|+||+||||++++|+ T Consensus 312 l~P~~~~ie~~ln~kL~~~~~~~~~~~~~fd~~~ll~~d~~~~~~~~~~~~~~G~~T~NE~R~~lgl~p~~ggD~~~~~~ 391 (409) T protein:vir:10 312 LQSILNMYELEINYKLFLISEIKNGFYSKFNVDTILRADIKTRYESYKEAIQNGFKTPNEIRELEEDEPLEGGDVLLING 391 (409) T ss_pred HHHHHHHHHHHHHHhhcCchhccCCcEEEEechhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCcCeeeecc Confidence 99999999999999999999988999999999999999999999999999999999999999999999999999999999 Q ss_pred ccccccccccccCCCCCC Q lcl|Aclame:pro 400 NMLPIDMAGQAYLKGGDT 417 (429) Q Consensus 400 n~~~~~~~~~~~~~~g~~ 417 (429) |++|++..+++..+||++ T Consensus 392 n~~~~~~~~~~~~kgGe~ 409 (409) T protein:vir:10 392 NMIPVKMAGEQYSKGGEK 409 (409) T ss_pred CccchhhccccccccCCC Confidence 999999988877788777 No 8 >protein:vir:4454 Length: 414 # NCBI annotation: Portal Protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:96 # MgeName: ST64B # Cross-refs: genbank:acc:NP_700377;genbank:gi:23505449;genbank:GeneID:955656 Probab=100.00 E-value=8.2e-101 Score=569.28 Aligned_cols=411 Identities=29% Similarity=0.480 Sum_probs=360.0 Q ss_pred CchhhhhhcccccccccccccCCchHHHHHhhc---CCCCcceechhhhhccHHHHHHHHHHHHhhccCceEEEecCCce Q lcl|Aclame:pro 1 MDSVKKFFNFEKRQTSQVIELNKDDEKLLEWLG---ISPSTISVKGKNALKVATVFACIKILSESVSKLPLKIYQEDEYG 77 (429) Q Consensus 1 Mg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~ 77 (429) ||||+++|+..... +.. ....+..+++ .+.+...++.+.++++++||+||++||+.||++|+++++.++++ T Consensus 1 Mg~f~~lf~r~~~~---~~~---~~~~~~~~~~~~~~~~~g~~v~~~~al~~~~v~~~i~~Ia~~ia~~p~~~~~~~~~~ 74 (414) T protein:vir:44 1 MVFFSGLFQRKSDA---PVT---TPAELADAIGLSYDTYTGKQISSQRAMRLTAVFSCVRVLAESVGMLPCNLYHLNGSL 74 (414) T ss_pred CchhhhhhccCccC---ccc---chhhHhHhhccCccccCCceechhhhhccHHHHHHHHHHHHHhccCceEEEEecCCc Confidence 99999988642211 111 1122334443 34566778889999999999999999999999999999999988 Q ss_pred eeeeecchhhhhhcccCcCCCCHHHHHHHHHHHHHhhCCeEEEEeeCCCCceEEEEeeCCcceEEEEcCCcceeeeeeEE Q lcl|Aclame:pro 78 IQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVYIDDVGLLNSKTKMW 157 (429) Q Consensus 78 ~~~~~~~~~~~~l~~~PN~~~s~~~~~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~l~p~~v~~~~~~~~~~~~~~~~~ 157 (429) +.....|+++++|+.+||++|++++||+.++.+++++||||++++++ .|++.+|||++|+.|++..+.++. ..| T Consensus 75 ~~~~~~~~~~~lL~~~PN~~~t~~~f~~~~~~~~ll~Gna~~~i~~~-~g~~~~L~~l~~~~v~~~~~~~~~-----~~y 148 (414) T protein:vir:44 75 KQRATGERLHKLISTHPNGYMTPQEFWELVVTCLCLRGNFYAYKVKA-FGEVAELLPVDPGCVVPKLNSSWE-----PVY 148 (414) T ss_pred eeecccchHHHHHHhhcccCCCHHHHHHHHHHHHhhcCCeEEEEEeC-CCcEEEEEEEcCceEEEEECCCCc-----EEE Confidence 88888999999999999999999999999999999999999999886 699999999999999998876432 234 Q ss_pred EeecccCceEEEccceEEEeecCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHHccCCcceEEEeCCCCCHHHHHHH Q lcl|Aclame:pro 158 YVVNTGGQQRVLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGDLNEDAKKVF 237 (429) Q Consensus 158 ~~~~~~g~~~~~~~~evih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~~e~~~~~ 237 (429) +....+|..+.|++++||||+++ +.++++|.||+..+...+.++.+++++..++|+||++|+|+++++..+++|+.+++ T Consensus 149 ~~~~~~g~~~~~~~~evih~~~~-~~d~~~G~s~i~~~~~~i~~~~~~~~~~~~~f~ng~~p~gil~~~~~l~~e~~~~~ 227 (414) T protein:vir:44 149 QVTFPDGSTDVLSQEDIWHVRTL-TLDGLVGLNPIAYAREAISLAAATEEHGARLFSNGAVTSGVLRTEQTLSDQAYERL 227 (414) T ss_pred EEEecCceEEEEccccEEEecCC-CCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEeCCCCCHHHHHHH Confidence 55566788889999999999965 56779999999999999999999999999999999999999999999999999999 Q ss_pred HHHHHHHhcccccccceeecCCCceeEecCCChhHHHHHHHHHHHHHHHHHHhcCChhhcCCccccccccHHHHHHHHHH Q lcl|Aclame:pro 238 RENFESMSSGLQNSHRIALMPVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKATLNNIEQQQQQFYT 317 (429) Q Consensus 238 ~~~~~~~~~g~~~~~~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~fgvp~~~l~~~~~~~~~n~~~~~~~~~~ 317 (429) +++|++.++|..|+|+++++++|++|+++++++.|+||+|.+++++++||++|||||.+|+..+.++++|.+++.+.|++ T Consensus 228 ~~~~~~~~~g~~n~~~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgVpp~~l~~~~~~t~~n~e~~~~~~~~ 307 (414) T protein:vir:44 228 KKDFEERHTGLGNAHRPMILEMGLDWKSMALNAEDSQFLETRKFQLEEICRLFRVPLHMVQNTDRATFNNIEELGLGFIN 307 (414) T ss_pred HHHHHHHhcCccccCcceecCCCceEEEccCChHHHHHHHHHHHHHHHHHHHhCCCHHHhCCCCCCCcccHHHHHHHHHH Confidence 99999999999999999999999999999999999999999999999999999999999999989999999999999999 Q ss_pred HHHhHHHHHHHHHHHHhhccchhhcchhhhhhhhhhHhhhhHHHHHHHHHHHHhCCCCCHHHHHHHhCCCCCCCcceeee Q lcl|Aclame:pro 318 DTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEAGGDRLLV 397 (429) Q Consensus 318 ~~l~P~~~~i~~~l~~~ll~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~Gl~~~~~gD~~~~ 397 (429) +||.|++++|+++||++|+++.+. .+++++||++++++.|.+++++.+++++++|++|+||+|+++|+||+||||++++ T Consensus 308 ~~l~P~~~~ie~~ln~~L~~~~~~-~~~~i~fd~~~ll~~d~~~~~~~~~~~~~~G~~t~NE~R~~~gl~p~~ggD~~~~ 386 (414) T protein:vir:44 308 YSLVPYLTRIEQRINTGLVRKSKQ-GVFYAKFNAGALLRGDMKSRFEAYATGINWGIYSPNDCRDLEDMNPRPGGDVYLT 386 (414) T ss_pred HHHHHHHHHHHHHHHhhcCCcccc-CceEEEEechhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCcceecc Confidence 999999999999999999988875 4789999999999999999999999999999999999999999999999999999 Q ss_pred ccccccccccccccCCCCCCCCCCCCCC Q lcl|Aclame:pro 398 NGNMLPIDMAGQAYLKGGDTNGEVSKEG 425 (429) Q Consensus 398 ~~n~~~~~~~~~~~~~~g~~~~~~~~~~ 425 (429) |+|+++....+....+++++..++...+ T Consensus 387 ~~n~~~~~~~~~~~~~~~~~~~~d~~~~ 414 (414) T protein:vir:44 387 PMNMTTKPSDGSKAGKQKDNANADETTS 414 (414) T ss_pred cccccccCCccccCCCCCCCCCCCCCCC Confidence 9998766544332222222222111111 No 9 >protein:vir:4509 Length: 424 # NCBI annotation: portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:97 # MgeName: V # Cross-refs: genbank:acc:NP_599035;genbank:gi:19548993;genbank:GeneID:935206 Probab=100.00 E-value=2.7e-100 Score=566.42 Aligned_cols=408 Identities=24% Similarity=0.374 Sum_probs=356.9 Q ss_pred CchhhhhhcccccccccccccCCchHHHHHhhcCCCCcceechhhhhccHHHHHHHHHHHHhhccCceEEEecCCceeee Q lcl|Aclame:pro 1 MDSVKKFFNFEKRQTSQVIELNKDDEKLLEWLGISPSTISVKGKNALKVATVFACIKILSESVSKLPLKIYQEDEYGIQR 80 (429) Q Consensus 1 Mg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~~~~ 80 (429) +.+|++||+..... .+..+.+ .....+.+.+.+...++.+.|+++++||+||++||++||++|+++++++++++.. T Consensus 16 ~~~~~~lf~~~~~~-~~~~~~~---~~~~~~~~~~~~~~~vs~~~al~~~~v~~cv~~Ia~~iA~lp~~v~~~~~~~~~~ 91 (424) T protein:vir:45 16 RVLLDALFRSKSLE-NPSTPIT---GDAVDTDGLFRADVYVSPETAMKLAAVYSCIYVLSSSLAQMPLHVMRRHKGKVEP 91 (424) T ss_pred hHHHHhhccccCCC-CCccccc---hhhhhhhccccCCceechHHhhccHHHHHHHHHHHHHHhhCceEEEEecCCceee Confidence 88888888632211 1122111 2233455667778889999999999999999999999999999999988878777 Q ss_pred eecchhhhhhcccCcCCCCHHHHHHHHHHHHHhhCCeEEEEeeCCCCceEEEEeeCCcceEEEEcCCcceeeeeeEEEee Q lcl|Aclame:pro 81 GTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVYIDDVGLLNSKTKMWYVV 160 (429) Q Consensus 81 ~~~~~~~~~l~~~PN~~~s~~~~~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~l~p~~v~~~~~~~~~~~~~~~~~~~~ 160 (429) ...|+++++|+.+||++||+++||+.++.+++++||+|+++.++..|++++|||++|+.|++..++.. ..|.+ T Consensus 92 ~~~~~l~~lL~~~PN~~~t~~~f~~~~v~~lll~Gna~~~i~r~~~G~~~~L~~l~~~~v~i~~~~~~-------~~y~~ 164 (424) T protein:vir:45 92 ARDHPAFYLVHDEPNTWQTSYKWRELKQRHILGWGNGYTWVKRNRRGEVISLDCCMPWETTLMNTGGR-------YTYGL 164 (424) T ss_pred cccchHHHHHHhhcccCCCHHHHHHHHHHHHhhcCCeEEEEEEcCCCcEEEEEEecCceEEEEEcCCe-------EEEEE Confidence 88899999999999999999999999999999999999999999999999999999999999776531 22333 Q ss_pred cccCceEEEccceEEEeecCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHHccCCcceEEEeCCCCCHHHHHHHHHH Q lcl|Aclame:pro 161 NTGGQQRVLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGDLNEDAKKVFREN 240 (429) Q Consensus 161 ~~~g~~~~~~~~evih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~~e~~~~~~~~ 240 (429) ..++....|+++||||||+++ .++.+|+||+.++...+.++.++++++.++|+||++|+|++++++.+++|+.+++++. T Consensus 165 ~~~~~~~~~~~~eVih~r~~~-~d~~~G~spi~~~~~~i~~~~~~~~~~~~~f~ng~~p~gil~~~~~l~~e~~~~~~~~ 243 (424) T protein:vir:45 165 YNEYGAFAISPDDMIHIRALG-NNQKMGLSPIMQHAETIGMGMSGQKYTESFFSGNARPAGIVSVKSGLNKESWGWLKDQ 243 (424) T ss_pred EecCceEEECcccEEEecCcC-CCCcccccHHHHHHHHHHHHHHHHHHHHHHHhccCCccEEEEeCCCCCHHHHHHHHHH Confidence 344456789999999999764 5788999999999999999999999999999999999999999999999999999999 Q ss_pred HHHHhccc-ccccceeecCCCceeEecCCChhHHHHHHHHHHHHHHHHHHhcCChhhcCCccccccccHHHHHHHHHHHH Q lcl|Aclame:pro 241 FESMSSGL-QNSHRIALMPVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKATLNNIEQQQQQFYTDT 319 (429) Q Consensus 241 ~~~~~~g~-~~~~~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~fgvp~~~l~~~~~~~~~n~~~~~~~~~~~~ 319 (429) |++.++|. +|+|+++|+++|++|+++++++.|+||+|.+++.+++||++|||||.+||..+.++++|.+++.+.|+++| T Consensus 244 ~~~~~~g~~~n~g~~~vl~~g~~~~~l~~~~~d~q~~e~~~~~~~~Ia~~fgVPp~~lg~~~~~t~sn~eq~~~~f~~~t 323 (424) T protein:vir:45 244 WQKASQALRRQENKTMLLPADLDYKALTVSPVDAQIIDMMKLNRSMIAGIFNIPAHMINDLEKATFSNISAQAIQFVRYT 323 (424) T ss_pred HHHHhccccccCCceeEcCCCceEEEccCChhHHHHHHHHHHHHHHHHHHhCCCHHHhCCCCCCCcccHHHHHHHHHHHH Confidence 99999885 58999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred HhHHHHHHHHHHHHhhccchhhcchhhhhhhhhhHhhhhHHHHHHHHHHHHhCCCCCHHHHHHHhCCCCCCCcceeeecc Q lcl|Aclame:pro 320 LQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEAGGDRLLVNG 399 (429) Q Consensus 320 l~P~~~~i~~~l~~~ll~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~Gl~~~~~gD~~~~~~ 399 (429) |.|+++.||++||++||++.++..|++++||++.+++.|.+++++.+.+++++|++|+||+|+++|+||+||||++++|+ T Consensus 324 L~P~~~~ie~~ln~kLl~~~e~~~g~~i~fd~~~llr~d~~~r~~~~~~~~~~g~~T~NE~R~~~gl~pi~ggD~~~~~~ 403 (424) T protein:vir:45 324 MMPWVTNWEQELNRRLFTRAELAAGYYVRFNLTGLLRGTPQERAQFYHFAITDGWMSRNEARAFEDMNPVEGLDEMLVSV 403 (424) T ss_pred HHHHHHHHHHHHHHhcCChhhhcCCcEEEeechhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCcceeeecc Confidence 99999999999999999999998999999999999999999999999999999999999999999999999999999999 Q ss_pred ccccccccccccCCCCCCCCCCCCCCCCCC Q lcl|Aclame:pro 400 NMLPIDMAGQAYLKGGDTNGEVSKEGNEGN 429 (429) Q Consensus 400 n~~~~~~~~~~~~~~g~~~~~~~~~~~~~n 429 (429) |+.+......+. ..+++.+++ T Consensus 404 n~~~~~~~~~~~---------~~~~~~~~~ 424 (424) T protein:vir:45 404 NAANPAGDFKPP---------KNDEGKTNE 424 (424) T ss_pred cccccccccCCC---------CCCCCCCCC Confidence 987643211111 111111111 No 10 >protein:vir:6240 Length: 457 # NCBI annotation: gp34 # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:131 # MgeName: phi-BT1 # Cross-refs: genbank:acc:NP_813694;swissprot:trembl:q859c3;genbank:gi:29366754;interpro:IPR006427;interpro:IPR006944;uniprot:Q859C3;genbank:GeneID:1258894 Probab=100.00 E-value=5.1e-99 Score=559.47 Aligned_cols=426 Identities=23% Similarity=0.347 Sum_probs=356.2 Q ss_pred Cchhhhhhcccccccccccc---cCCchHHHHHhhcCCCCcceechhhhhccHHHHHHHHHHHHhhccCceEEEecCCce Q lcl|Aclame:pro 1 MDSVKKFFNFEKRQTSQVIE---LNKDDEKLLEWLGISPSTISVKGKNALKVATVFACIKILSESVSKLPLKIYQEDEYG 77 (429) Q Consensus 1 Mg~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~ 77 (429) ||||+++|+...+....... .......+..+.+.+.++..|+.+.|+++++||+||++||++||++|+++++.++++ T Consensus 1 Mg~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~al~~~~v~~~i~~ia~~iA~lp~~~~~~~~~~ 80 (457) T protein:vir:62 1 MGFWSALFGRGHSPALDAAEGRAWEPYDPSIYNLGATASSGERVTPHDALQVSAVFASVRLLSETIATLPLSTYSKRGGT 80 (457) T ss_pred CchhhhhhccccccccccccccccccchhhhhhccccccCCceechHHhhccHHHHHHHHHHHHhHhhCceEEEEecCCc Confidence 99999998754443322211 122233344455566778899999999999999999999999999999999987665 Q ss_pred eeeeecchhhhhhcccCcCCCCHHHHHHHHHHHHHhhCCeEEEEeeCCCCceEEEEeeCCcceEEEEcCCcceeeeeeEE Q lcl|Aclame:pro 78 IQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVYIDDVGLLNSKTKMW 157 (429) Q Consensus 78 ~~~~~~~~~~~~l~~~PN~~~s~~~~~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~l~p~~v~~~~~~~~~~~~~~~~~ 157 (429) +.. ..|+.+..|+.+||++||+++||+.++.+++++||+|+++.++ .|.+.+||||+|++|++..+............ T Consensus 81 ~~~-~~~~~~~~ll~~pn~~~t~~~f~~~~~~~l~l~Gna~~~i~~~-~g~~~~l~~l~p~~v~v~~~~~~~~~~~~~~~ 158 (457) T protein:vir:62 81 RKE-IDTPEWLDFPNAEPGGMGRIDILSQTVLSLLLQGNAFLAVRWA-GPNIAGLDVLDPTKIHVHMVMVDGLRRKVFEA 158 (457) T ss_pred ccc-ccchHHHHhccccCCCCCHHHHHHHHHHHHhhcCCeEEEEEeC-CCcEEEEEEEcCcceEEEEeccCCccceeEEE Confidence 544 4455544444589999999999999999999999999998665 68999999999999999876544333333444 Q ss_pred EeecccCc---eEEEccceEEEeecCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHHccCCcceEEEeCCCCCHHHH Q lcl|Aclame:pro 158 YVVNTGGQ---QRVLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGDLNEDAK 234 (429) Q Consensus 158 ~~~~~~g~---~~~~~~~evih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~~e~~ 234 (429) |.+..+|. ...|++++|||||.+++.+.++|+||+.++...+....++++++.++|+||++|+|++++++.+++|+. T Consensus 159 y~~~~~g~~~~~~~~~~~eiih~r~~~~~~~~~G~sp~~~~~~~i~~~~~~~~~~~~~f~ng~~p~gil~~~~~ls~e~~ 238 (457) T protein:vir:62 159 YDIDADGNEVLLGWFTPRDVLHIPGMMLPGDFVGCSPISYARESIGLALAAQKYGAHFFRNGAMPGAVVEVPGTMSEEGL 238 (457) T ss_pred EEEccCCceeEEEeeCccceEEecCCCCCCceecccHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEcCCCCCHHHH Confidence 44544443 346899999999998888889999999999999999999999999999999999999999999999999 Q ss_pred HHHHHHHHHHhcccccccceeecCCCceeEecCCChhHHHHHHHHHHHHHHHHHHhcCChhhcCCcccccc--ccHHHHH Q lcl|Aclame:pro 235 KVFRENFESMSSGLQNSHRIALMPVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKATL--NNIEQQQ 312 (429) Q Consensus 235 ~~~~~~~~~~~~g~~~~~~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~fgvp~~~l~~~~~~~~--~n~~~~~ 312 (429) +++++.|++.++|..|+|+++||++|++|++++++++|+||+|.+++++++||++|||||.+||..+.+++ +|.+++. T Consensus 239 ~~~~~~~~~~~~G~~nag~~~vl~~g~~~~~l~~~~~d~q~~e~~~~~~~~Ia~~fgVPp~~lg~~~~~~~~~sn~eq~~ 318 (457) T protein:vir:62 239 ARAREAWRAANSGVDNAHRVALLTEGAKFSKVAMSPDEAQFLQTRQFQVPEIARIFGVPPHLISDATNSTSWGSGLAEQN 318 (457) T ss_pred HHHHHHHHHHhcCccccCcceecCCCceEEEccCChhHHHHHHHHHHHHHHHHHHhCCCHHHcCCCCCcccccchHHHHH Confidence 99999999999999999999999999999999999999999999999999999999999999998777654 8899999 Q ss_pred HHHHHHHHhHHHHHHHHHHHHhhccchhhcchhhhhhhhhhHhhhhHHHHHHHHHHHHhCCCCCHHHHHHHhCCCCCCCc Q lcl|Aclame:pro 313 QQFYTDTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEAGG 392 (429) Q Consensus 313 ~~~~~~~l~P~~~~i~~~l~~~ll~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~Gl~~~~~g 392 (429) ++|+++||.|+++.||++|+++|+++.+. .+++++||++.+++.|.+++++.+.+++++|+||+||+|+++|+||+||| T Consensus 319 ~~f~~~~l~P~~~~ie~~ln~~L~~~~~~-~~~~i~fd~~~l~~~d~~~r~~~~~~~~~~G~~T~NE~R~~~gl~pi~~g 397 (457) T protein:vir:62 319 IAFTMFSLRPWLERIEAGFNRLLFAETAD-RFRFVKFNLDEIKRGAPKERMELWSLGLQNGIYSIDEVRAAEDMTPLPDG 397 (457) T ss_pred HHHHHHHHHHHHHHHHHHHHhhhcCcccc-CceEEEeechhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCC Confidence 99999999999999999999999988774 57899999999999999999999999999999999999999999999986 Q ss_pred --ceeeeccccccccccccccCCCCCCCC---------CCCCCCCCCC Q lcl|Aclame:pro 393 --DRLLVNGNMLPIDMAGQAYLKGGDTNG---------EVSKEGNEGN 429 (429) Q Consensus 393 --D~~~~~~n~~~~~~~~~~~~~~g~~~~---------~~~~~~~~~n 429 (429) |++++|+|+.+++...++...+...+. +.+.++.+++ T Consensus 398 ~~D~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 445 (457) T protein:vir:62 398 LGEKYRVPLNLGEIGEEPEPEPAPAPPAIDPPAEEPADDEEPDNAEGD 445 (457) T ss_pred CcceeeeccccccccccccccccCCCccCCCCccCCCCCCCCCCCCCC Confidence 999999999887765543332211111 1111111111 No 11 >protein:vir:1326 Length: 457 # NCBI annotation: gp34 # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:28 # MgeName: phi-C31 # Cross-refs: genbank:acc:NP_047925;swissprot:trembl:q9zxb2;genbank:gi:9631143;uniprot:Q9ZXB2;genbank:GeneID:2715872 Probab=100.00 E-value=8.7e-99 Score=558.17 Aligned_cols=426 Identities=23% Similarity=0.363 Sum_probs=362.6 Q ss_pred Cchhhhhhcccccccccc---cccCCchHHHHHhhcCCCCcceechhhhhccHHHHHHHHHHHHhhccCceEEEecCCce Q lcl|Aclame:pro 1 MDSVKKFFNFEKRQTSQV---IELNKDDEKLLEWLGISPSTISVKGKNALKVATVFACIKILSESVSKLPLKIYQEDEYG 77 (429) Q Consensus 1 Mg~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~ 77 (429) ||||+++|++.+...... ...+..+..+..+.+.+.++..|+.+.|+++++||+||++||++||++|+++++.++++ T Consensus 1 Mg~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~V~~~~al~~~~V~~~v~~Ia~~iA~lp~~~~~~~~~~ 80 (457) T protein:vir:13 1 MGFWSALFGRGHSPALDGIEARAWEPYDPSIYNLGAVAASGETVTPHDALQVSAVFASVRLLSETIATLPLSTYSKRGGS 80 (457) T ss_pred CchhhhhhcccccccccccccccccccchHHHhhcccccCCceechHHhhccHHHHHHHHHHHHhhccCceEEEEecCCc Confidence 999999998766543222 22233445566677778888999999999999999999999999999999999998888 Q ss_pred eeeeecchhhhhhcccCcCCCCHHHHHHHHHHHHHhhCCeEEEEeeCCCCceEEEEeeCCcceEEEEcCCcceeeeeeEE Q lcl|Aclame:pro 78 IQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVYIDDVGLLNSKTKMW 157 (429) Q Consensus 78 ~~~~~~~~~~~~l~~~PN~~~s~~~~~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~l~p~~v~~~~~~~~~~~~~~~~~ 157 (429) +.....|+++.+++..|| .|++++||+.++.+++++||+|+++.++ .|.+.+||||+|++|++..+............ T Consensus 81 ~~~~~~~~l~~~ln~~~n-~~t~~~f~~~~~~~lll~Gna~~~i~~~-~g~~~~l~~l~p~~v~v~~~~~~~~~~~~~~~ 158 (457) T protein:vir:13 81 RKEIVTPEWLDYPNAEPG-GMGRIDILSQTVLSLLLQGNAFLAVRWQ-GPNIVGLDVLDPTKIHVHMVMVDGLRRKVFEA 158 (457) T ss_pred ccccccchHHHhccccCC-CCCHHHHHHHHHHHHhhcCCeEEEEEec-CCcEEEEEEEccCceEEEEecCCCccceeEEE Confidence 777788899999986555 7999999999999999999999999776 58999999999999999877554333333344 Q ss_pred EeecccCc---eEEEccceEEEeecCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHHccCCcceEEEeCCCCCHHHH Q lcl|Aclame:pro 158 YVVNTGGQ---QRVLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGDLNEDAK 234 (429) Q Consensus 158 ~~~~~~g~---~~~~~~~evih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~~e~~ 234 (429) |.+..+|. ...|++++|||++.+++.+.++|+||+.++...|.++.++++++.++|+||++|+|+++++..+++++. T Consensus 159 y~~~~~~~~~~~~~~~~~diih~~~~~~~~~~~G~s~i~~~~~~i~~~~~~~~~~~~~f~ng~~p~gil~~~~~ls~e~~ 238 (457) T protein:vir:13 159 YDIDADGNEVLLGWFTPRDVLHIPGMMLPGDFVGCSPISYARESIGLALAAQKYGSKFFANGAMPGAVVEVPGTMSEEGL 238 (457) T ss_pred EEEecCCceeeEEeeCccceEEecCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHHhcCCCcceEEEcCCCCCHHHH Confidence 44544443 346899999999998888889999999999999999999999999999999999999999999999999 Q ss_pred HHHHHHHHHHhcccccccceeecCCCceeEecCCChhHHHHHHHHHHHHHHHHHHhcCChhhcCCcccccc--ccHHHHH Q lcl|Aclame:pro 235 KVFRENFESMSSGLQNSHRIALMPVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKATL--NNIEQQQ 312 (429) Q Consensus 235 ~~~~~~~~~~~~g~~~~~~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~fgvp~~~l~~~~~~~~--~n~~~~~ 312 (429) +++++.|++.++|.+|+|+++||++|++|+++++++.|+||+|.+++++++||++|||||.+||..+.+++ +|.+++. T Consensus 239 ~~~~~~~~~~~~g~~nag~~~vl~~g~~~~~l~~~~~d~q~~e~~~~~~~~Ia~~fgVPp~~lg~~~~~~~~~sn~eq~~ 318 (457) T protein:vir:13 239 ARAREAWRAANSGVDNAHRVALLTEGAKFSKVAMSPDEAQFLQTRQFQVPEIARIFGVPPHLISDATNSTSWGSGLAEQN 318 (457) T ss_pred HHHHHHHHHHhcCccccCcceecCCCceEEEccCChhHHHHHHHHHHHHHHHHHHhCCCHHHcCCCCCcccccchHHHHH Confidence 99999999999999999999999999999999999999999999999999999999999999998776654 8899999 Q ss_pred HHHHHHHHhHHHHHHHHHHHHhhccchhhcchhhhhhhhhhHhhhhHHHHHHHHHHHHhCCCCCHHHHHHHhCCCCCCCc Q lcl|Aclame:pro 313 QQFYTDTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEAGG 392 (429) Q Consensus 313 ~~~~~~~l~P~~~~i~~~l~~~ll~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~Gl~~~~~g 392 (429) ++|+++||.|+++.||++|+++|+++.+. .+++++||++++++.|.+++++.+.+++++|+||+||+|+++|+||+||| T Consensus 319 ~~f~~~tl~P~~~~ie~~ln~~L~~~~~~-~~~~i~fd~~~l~~~D~~~r~~~~~~~~~~G~~T~NE~R~~~gl~Pi~~g 397 (457) T protein:vir:13 319 IAFTMFSLRPWLERIEAGFNRLLFAETAD-RFRFVKFNLDEIKRGAPKERMELWSLGLQNGIYSIDEVRAAEDMTPLPDG 397 (457) T ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCcccc-CceeEEeechhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCC Confidence 99999999999999999999999988764 67889999999999999999999999999999999999999999999986 Q ss_pred --ceeeeccccccccccccccCCC---------CCCCCCCCCCCCCCC Q lcl|Aclame:pro 393 --DRLLVNGNMLPIDMAGQAYLKG---------GDTNGEVSKEGNEGN 429 (429) Q Consensus 393 --D~~~~~~n~~~~~~~~~~~~~~---------g~~~~~~~~~~~~~n 429 (429) |++++|+|+.+++...+....+ ++.+.+.+..+..++ T Consensus 398 ~~d~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~ 445 (457) T protein:vir:13 398 LGEKYRVPLNLGEVGEEPEPEPAPAPPAIEPPAEEPDEEPEPEGKPDD 445 (457) T ss_pred cccceeeccccccccccccccccCCCCCCCCCccccCCCCCCCCCCcc Confidence 9999999998876543322111 111111111111111 No 12 >protein:vir:100249 Length: 431 # NCBI annotation: gp78 # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:1619 # MgeName: Bcep176 # Cross-refs: genbank:acc:YP_355414;genbank:gi:77864704;genbank:GeneID:3725971 Probab=100.00 E-value=3.2e-98 Score=555.10 Aligned_cols=405 Identities=20% Similarity=0.279 Sum_probs=351.1 Q ss_pred Cchhhhhhcccccccccc------cc-------------cCCchHHHHHhhc-CCCCcceechhhhhccHHHHHHHHHHH Q lcl|Aclame:pro 1 MDSVKKFFNFEKRQTSQV------IE-------------LNKDDEKLLEWLG-ISPSTISVKGKNALKVATVFACIKILS 60 (429) Q Consensus 1 Mg~~~~~~~~~~~~~~~~------~~-------------~~~~~~~~~~~~~-~~~~~~~~~~~~a~~~~~v~~~i~~ia 60 (429) ||+|++|++..+..++.. .. ....++.+..|++ .+.+...++.+.|+++++||+||++|| T Consensus 1 Mgl~d~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~~v~~~~al~~~~V~~ci~~Ia 80 (431) T protein:vir:10 1 MGLFDFIRREKQPEAQARPHVEPSFQASTPTTSIPGETFEGLDDPRLKEYIRRGELNGGTGRETRALRNMAVLRCVTLIS 80 (431) T ss_pred CcchhhhhcCcccccccccccccccccccccccccccccccccchHHHHhhccCccCcceechhhhhccHHHHHHHHHHH Confidence 999998876333211110 00 0112234455553 345667789999999999999999999 Q ss_pred HhhccCceEEEecCCceeeeeecchhhhhhcccCcCCCCHHHHHHHHHHHHHhhCCeEEEEeeCCCCceEEEEeeCCcce Q lcl|Aclame:pro 61 ESVSKLPLKIYQEDEYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKV 140 (429) Q Consensus 61 ~~ia~~~~~~~~~~~~~~~~~~~~~~~~~l~~~PN~~~s~~~~~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~l~p~~v 140 (429) +.||++|+++++.++ ++.....|+++++|+.+||++||+++||+.++.+++++||+|++++++. |.+++|||++|++| T Consensus 81 ~~iA~lp~~v~~~~~-~~~~~~~~~~~~lL~~~PN~~~t~~~f~~~l~~~lll~Gna~~~i~r~~-g~~~~L~pl~~~~v 158 (431) T protein:vir:10 81 GTIGMLPMNLISSDD-SKQVLTDDPAHRLLKYKPNDWQTPMEFKSLMQLRALLDGESMARIVWSG-NRPIRLIPMDRGSA 158 (431) T ss_pred HhhccCceEEEEecC-ceeeeccchHHHHHhhccCCCCCHHHHHHHHHHHHhhcCCeEEEEEEcC-CceEEEEEEcCcee Confidence 999999999999754 4456778999999999999999999999999999999999999999985 88999999999999 Q ss_pred EEEEcCCcceeeeeeEEEeecccCceEEEccceEEEeecCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHHccCCcc Q lcl|Aclame:pro 141 TVYIDDVGLLNSKTKMWYVVNTGGQQRVLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVK 220 (429) Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~evih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~ 220 (429) ++..+.++. ..|++...+|..+.|+++||||||+++ .++++|+||+..+...+.++.+++++..++|+||++|+ T Consensus 159 ~~~~~~~~~-----~~y~~~~~~g~~~~~~~~dViHir~~~-~dg~~G~spi~~~~~~i~~~~~~~~~~~~~f~ng~~p~ 232 (431) T protein:vir:10 159 KGRLTSTWQ-----IVYDYTTPTGDKIELPAREVFHLRDLS-IDGVSGVSRVKLSGNALELAEQAERAASRTFRTGVMAG 232 (431) T ss_pred EEEEcCCCe-----EEEEEEeCCceEEEEchhhEEEecCcC-CCCcccccHHHHHHHHHHHHHHHHHHHHHHHhccCCcc Confidence 998776532 234455677888899999999999664 67799999999999999999999999999999999999 Q ss_pred eEEEeCCCCCHHHHHHHHHHHHHHhcccccccceeecCCCceeEecCCChhHHHHHHHHHHHHHHHHHHhcCChhhcCCc Q lcl|Aclame:pro 221 GLVQYVGDLNEDAKKVFRENFESMSSGLQNSHRIALMPVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDL 300 (429) Q Consensus 221 ~~~~~~~~~~~e~~~~~~~~~~~~~~g~~~~~~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~fgvp~~~l~~~ 300 (429) |++++++.+++|+.+++++.|++.++|.+|+|+++|+++|++|++++++++|+|++|.+++++++||++|||||.+|+.. T Consensus 233 gil~~~~~ls~e~~~~~~~~~~~~~~g~~n~g~~~vl~~g~~~~~l~~~~~d~q~le~r~~~~~~Ia~~fgVPp~~lg~~ 312 (431) T protein:vir:10 233 GAIEVPKELSDNAYGRMKASVQENHTGSENAGSWMLLEEGATAKQFSNTAASAQQIENRNHQIEEVARMYGVPRPLLMMD 312 (431) T ss_pred EEEecCCCCCHHHHHHHHHHHHHHhcCccccCCceecCCCceEEEccCChhHHHHHHHHHHhHHHHHHHhCCCHHHhCCC Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999998 Q ss_pred cccccccHHHHHHHHHHHHHhHHHHHHHHHHHHhhccchhhcchhhhhhhhhhHhhhhHHHHHHHHHHHHhCCC----CC Q lcl|Aclame:pro 301 SKATLNNIEQQQQQFYTDTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAILRADIKTRYEAYRTGIQGGF----LK 376 (429) Q Consensus 301 ~~~~~~n~~~~~~~~~~~~l~P~~~~i~~~l~~~ll~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~----~t 376 (429) +.++++|.+++.++|++.||.|+++.||++||++||++.+. .+++++||++.+++.|.+++++.+.+++.+|+ || T Consensus 313 ~~~t~sn~eq~~~~f~~~tL~P~~~~ie~~ln~~Ll~~~~~-~~~~~~fd~~~llr~d~~~r~~~~~~~~~~G~~~g~lT 391 (431) T protein:vir:10 313 DTSWGSGIEQLAIFFIQYGLSHWFVSWEQAAARAFLPEKML-GQRQFKFNEGALLRGTLNDQAAFFSKALGAGGQSPWMK 391 (431) T ss_pred CCCccccHHHHHHHHHHHHHHHHHHHHHHHHHhhccChhhc-CCceEEEechhhhccCHHHHHHHHHHHHhcccccCccC Confidence 88999999999999999999999999999999999987554 57899999999999999999999999997654 99 Q ss_pred HHHHHHHhCCCCCCC--cceeeeccccccccccccccCCCCCCCCCCCCCC Q lcl|Aclame:pro 377 PNEARSKEDLPPEAG--GDRLLVNGNMLPIDMAGQAYLKGGDTNGEVSKEG 425 (429) Q Consensus 377 ~NE~R~~~Gl~~~~~--gD~~~~~~n~~~~~~~~~~~~~~g~~~~~~~~~~ 425 (429) +||+|+++|+||+++ ||++++|.|..+.+...++ +... T Consensus 392 ~NE~R~~~gl~p~~~~~gD~~~~p~n~~~~~~~~~~-----------p~~~ 431 (431) T protein:vir:10 392 QNEVREMLDLPRADDPVADQLRNPMTQKQKGSGDEP-----------PATT 431 (431) T ss_pred HHHHHHHhCCCCCCCccccceecccccccCCCCCCC-----------CCCC Confidence 999999999999954 9999999997655432211 1111 No 13 >protein:vir:1266 Length: 416 # NCBI annotation: hypothetical protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:329 # MgeName: phi-105 # Cross-refs: genbank:acc:NP_690758;genbank:gi:22854998;genbank:GeneID:955213 Probab=100.00 E-value=5e-98 Score=554.03 Aligned_cols=414 Identities=29% Similarity=0.489 Sum_probs=361.9 Q ss_pred chhhhhhcccccccccccccCCchHHHHHhhcCC--CCcceechhhhhccHHHHHHHHHHHHhhccCceEEEecCCceee Q lcl|Aclame:pro 2 DSVKKFFNFEKRQTSQVIELNKDDEKLLEWLGIS--PSTISVKGKNALKVATVFACIKILSESVSKLPLKIYQEDEYGIQ 79 (429) Q Consensus 2 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~~~ 79 (429) =||+++|+.+...+ .........+.+++|.. .+...++.+.++++|+||+||++||++||++|+++++.++++.. T Consensus 1 m~~~~~f~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~v~~~~al~~~~v~~~i~~Ia~~ia~l~~~~~~~~~~~~~ 77 (416) T protein:vir:12 1 MLLERMFEKRSGSS---DHEDGFNNILLNMFGGRKTASGERVSESNSLVQPDIFACVNVLSDDIAKLPIHTYKRTDGGIE 77 (416) T ss_pred CccchhcccccCcc---ccCccchhHHHHhhcCcccccCceechhhhhccHHHHHHHHHHHHhhhhCceEEEEecCCccc Confidence 25666665332222 22223344566777643 45567888999999999999999999999999999999988888 Q ss_pred eeecchhhhhhcccCcCCCCHHHHHHHHHHHHHhhCCeEEEEeeCCCCceEEEEeeCCcceEEEEcCCcceeeeeeEEEe Q lcl|Aclame:pro 80 RGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVYIDDVGLLNSKTKMWYV 159 (429) Q Consensus 80 ~~~~~~~~~~l~~~PN~~~s~~~~~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~l~p~~v~~~~~~~~~~~~~~~~~~~ 159 (429) ....|+++++|+.+||++||+++||+.++.+++++||||+++.++..|++.+||||+|++|++..+.+. ...+|. T Consensus 78 ~~~~~~l~~~l~~~PN~~~t~~~f~~~~v~~lll~Gna~~~i~r~~~G~~~~L~~l~~~~v~v~~~~~~-----~~~~~~ 152 (416) T protein:vir:12 78 RKPEHKSAHAVYARPNPYMTAFTWKKLMMTHVLTWGNAYSYIQFGSHGYPEALFPLRPDYTNAYVHPTT-----GMLWYQ 152 (416) T ss_pred cccccHHHHHHHhhcccCCCHHHHHHHHHHHHhhcCCeEEEEEECCCCcEEEEEEECCcceEEEEeCCC-----cEEEEE Confidence 888899999999999999999999999999999999999999999999999999999999999876542 234556 Q ss_pred ecccCceEEEccceEEEeecCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHHccCCcceEEEeCCCCCHHHHHHHHH Q lcl|Aclame:pro 160 VNTGGQQRVLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGDLNEDAKKVFRE 239 (429) Q Consensus 160 ~~~~g~~~~~~~~evih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~~e~~~~~~~ 239 (429) +..+|..+.|++++|||++++ +.++.+|.||+.++..++.+..+++++..++|+||++|+|+++++..+++|+.+++++ T Consensus 153 ~~~~g~~~~~~~~eiih~~~~-~~~~~~G~s~i~~~~~~i~~~~~~~~~~~~~~~ng~~p~~il~~~~~~~~e~~~~~~~ 231 (416) T protein:vir:12 153 TVLNGKAIELYDYEVLHFKGL-STDGIHGKSPIGVVREHIGAQAAATKYNAKLYKNEATPRGILKVPAFLDEKPKENVRK 231 (416) T ss_pred EecCCeEEEecCccEEEecCc-CCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhcCCCCceEEecCCCCCHHHHHHHHH Confidence 667888899999999999965 4567999999999999999999999999999999999999999999999999999999 Q ss_pred HHHHHhcccccccceeecCCCceeEecCCChhHHHHHHHHHHHHHHHHHHhcCChhhcCCccccccccHHHHHHHHHHHH Q lcl|Aclame:pro 240 NFESMSSGLQNSHRIALMPVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKATLNNIEQQQQQFYTDT 319 (429) Q Consensus 240 ~~~~~~~g~~~~~~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~fgvp~~~l~~~~~~~~~n~~~~~~~~~~~~ 319 (429) .|+... ++++++++++|++|+++++++.|+|++|.+++++++||++|||||.+|+..+.++++|.+++.++|++.| T Consensus 232 ~~~~~~----~~~~~~vl~~g~~~~~l~~~~~d~q~~e~~~~~~~~Ia~~fgVPp~~lg~~~~~t~sn~e~~~~~f~~~~ 307 (416) T protein:vir:12 232 EWKRVN----KVENIAIIDYGLEYQSISMPLQEAQFVESMKFNKAQISMIYKVPLHKLNELDKATFSNIEHQSIEYVRNT 307 (416) T ss_pred HHHHHh----cCCCeeecCCCceEEEccCChhhHHHHHHHHHHHHHHHHHhCCCHHHhCCccCCCcccHHHHHHHHHHHH Confidence 998654 4578999999999999999999999999999999999999999999999988999999999999999999 Q ss_pred HhHHHHHHHHHHHHhhccchhhcchhhhhhhhhhHhhhhHHHHHHHHHHHHhCCCCCHHHHHHHhCCCCCCCcceeeecc Q lcl|Aclame:pro 320 LQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEAGGDRLLVNG 399 (429) Q Consensus 320 l~P~~~~i~~~l~~~ll~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~Gl~~~~~gD~~~~~~ 399 (429) |.|++++|+++|+++|+++.+...+++++||++.+++.|.+++++.+.+++++|++|+||+|+++|+||+||||++++|+ T Consensus 308 l~P~~~~ie~~l~~~l~~~~~~~~g~~i~fd~~~l~~~d~~~~~~~~~~~~~~G~~T~NE~R~~~gl~Pi~ggd~~~~~~ 387 (416) T protein:vir:12 308 LQPWIVNFEQELNVKLFLDHDQKSGHYVKFNIDSELRGDSKTQAEYLKTLHETGVLNKDEIRELLERNPIENGDKYISSL 387 (416) T ss_pred HHHHHHHHHHHHHHhhcCchhhcCCceEEeechhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCcceeeecc Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred ccccccccccccCCCCCCCCCCCCCCCCC Q lcl|Aclame:pro 400 NMLPIDMAGQAYLKGGDTNGEVSKEGNEG 428 (429) Q Consensus 400 n~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 428 (429) |++|++..++++........++.++.+|| T Consensus 388 n~~~~~~~~~~~~~~~~~~~~gge~~~~g 416 (416) T protein:vir:12 388 NYVFLDFLEEYQRLKAGGAMKGGDNKNEG 416 (416) T ss_pred ccccccccchhhccccccccCCCCCcCCC Confidence 99999987655432211111122223333 No 14 >protein:vir:483 Length: 413 # NCBI annotation: putative portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:11 # MgeName: P27 # Cross-refs: genbank:acc:NP_543090;swissprot:trembl:q8w629;genbank:gi:18249902;uniprot:Q8W629;genbank:GeneID:929685 Probab=100.00 E-value=3.9e-98 Score=554.61 Aligned_cols=410 Identities=30% Similarity=0.485 Sum_probs=357.3 Q ss_pred CchhhhhhcccccccccccccCCchHHHHHhhc---CCCCcceechhhhhccHHHHHHHHHHHHhhccCceEEEecCCce Q lcl|Aclame:pro 1 MDSVKKFFNFEKRQTSQVIELNKDDEKLLEWLG---ISPSTISVKGKNALKVATVFACIKILSESVSKLPLKIYQEDEYG 77 (429) Q Consensus 1 Mg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~ 77 (429) |- |+++|+ |++..+... ...+.++++ .+.++..++.+.|+++++|++||++||+++|++|+++++.++++ T Consensus 1 ~~-f~~~f~---r~~~~~~~~---~~~~~~~~~~~~~~~~g~~v~~~~~l~~~~v~~~i~~Ia~~iA~~p~~~~~~~~~~ 73 (413) T protein:vir:48 1 MF-FSGLFQ---RKSDAPVTT---PAELAEAIGLSYDTYTGKRISSQRAMRLTAVYSCVRVLAESVGMLPCSLYKISGTL 73 (413) T ss_pred Cc-cchhhc---cCccCCccc---hHHHHHhhhcCcccccCceechhhhhccHHHHHHHHHHHHhhhhCceEEEEecCCc Confidence 43 333443 333222222 233444443 34566678899999999999999999999999999999999888 Q ss_pred eeeeecchhhhhhcccCcCCCCHHHHHHHHHHHHHhhCCeEEEEeeCCCCceEEEEeeCCcceEEEEcCCcceeeeeeEE Q lcl|Aclame:pro 78 IQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVYIDDVGLLNSKTKMW 157 (429) Q Consensus 78 ~~~~~~~~~~~~l~~~PN~~~s~~~~~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~l~p~~v~~~~~~~~~~~~~~~~~ 157 (429) +.....|+++++|+.+||++|++++||+.++.+++++||+|++++++ .|++.+|||++|++|++..+.++. ..| T Consensus 74 ~~~~~~~~~~~lL~~~PN~~~t~~~f~~~~~~~lll~Gn~~~~i~~~-~g~~~~L~~l~~~~v~~~~~~~~~-----~~y 147 (413) T protein:vir:48 74 KTRVVDERLHKLVSAKPNGYMTPQEFWELVIVCLCLRGNFYAYKVKA-LGEVVELLPIDPGCVEPKLNSQWQ-----PVY 147 (413) T ss_pred ceeecccHHHHHHHhhccCCCCHHHHHHHHHHHHhhcCceEEEEEeC-CCcEEEEEEEcCceEEEEEcCCce-----EEE Confidence 88888999999999999999999999999999999999999999886 689999999999999998876532 234 Q ss_pred EeecccCceEEEccceEEEeecCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHHccCCcceEEEeCCCCCHHHHHHH Q lcl|Aclame:pro 158 YVVNTGGQQRVLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGDLNEDAKKVF 237 (429) Q Consensus 158 ~~~~~~g~~~~~~~~evih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~~e~~~~~ 237 (429) +....+|..+.|++++|||+++++ .++.+|+||+..+..++.++.++.+++.++|+||++|+|+++++..+++|+.+++ T Consensus 148 ~~~~~~g~~~~~~~~evih~~~~~-~d~~~G~s~i~~~~~~i~~~~~~~~~~~~~~~ng~~p~gil~~~~~~~~e~~~~~ 226 (413) T protein:vir:48 148 QVTFPDGSVDVLTQDEIWHVRTLT-LDGLVGLNPIAYAREAISLAAATEEHGARLFGNGAVTSGVLRTEQKLTPDAYERL 226 (413) T ss_pred EEEecCceEEEEccccEEEecCcC-CCCcccccHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEeCCCCCHHHHHHH Confidence 455567888899999999999764 5678999999999999999999999999999999999999999999999999999 Q ss_pred HHHHHHHhcccccccceeecCCCceeEecCCChhHHHHHHHHHHHHHHHHHHhcCChhhcCCccccccccHHHHHHHHHH Q lcl|Aclame:pro 238 RENFESMSSGLQNSHRIALMPVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKATLNNIEQQQQQFYT 317 (429) Q Consensus 238 ~~~~~~~~~g~~~~~~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~fgvp~~~l~~~~~~~~~n~~~~~~~~~~ 317 (429) ++.|++.++|..|+|+++++++|++|++++.+++|+|++|.+++++++||++|||||.+|+..+.++++|.+++...|++ T Consensus 227 ~~~~~~~~~g~~n~g~~~vl~~g~~~~~l~~~~~d~q~~e~~~~~~~~Ia~~fgVPp~~lg~~~~~t~~n~e~~~~~f~~ 306 (413) T protein:vir:48 227 KKDFEERHTGLGNAHRPMILEMGLDWKSMALNAEDSQFLETRKFQLEEICRLFRVPLHMVQNTDRATFNNIEELGLGFIN 306 (413) T ss_pred HHHHHHHhcCccccCcceecCCCceEEeccCChhHHHHHHHHHHHHHHHHHHhCCCHHHhCCCcCCCcccHHHHHHHHHH Confidence 99999999999999999999999999999999999999999999999999999999999999888999999999999999 Q ss_pred HHHhHHHHHHHHHHHHhhccchhhcchhhhhhhhhhHhhhhHHHHHHHHHHHHhCCCCCHHHHHHHhCCCCCCCcceeee Q lcl|Aclame:pro 318 DTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEAGGDRLLV 397 (429) Q Consensus 318 ~~l~P~~~~i~~~l~~~ll~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~Gl~~~~~gD~~~~ 397 (429) .||.|++++|+++||++|+++.+. .+++++||++++++.|.+++++.+.+++++|++|+||+|+++|+||+||||++++ T Consensus 307 ~~i~P~~~~ie~~l~~~L~~~~~~-~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~T~NE~R~~~g~~p~~ggD~~~~ 385 (413) T protein:vir:48 307 YSLVPYLTRIEQRINTGLVRESKQ-GKFYAKFNAGALLRGDMKSRFEAYATGINWGIYSPNDCRDLEDMNPRPGGDVYLT 385 (413) T ss_pred HHHHHHHHHHHHHHHhhccCcccc-CCeEEEEechhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCcceeec Confidence 999999999999999999988775 5789999999999999999999999999999999999999999999999999999 Q ss_pred ccccccccccccccCCCCCCCCCCCCCC Q lcl|Aclame:pro 398 NGNMLPIDMAGQAYLKGGDTNGEVSKEG 425 (429) Q Consensus 398 ~~n~~~~~~~~~~~~~~g~~~~~~~~~~ 425 (429) |+|+.+++..++...+.++..++++..+ T Consensus 386 ~~n~~~~~~~~~~~~~~~~~~~~~~~~~ 413 (413) T protein:vir:48 386 PMNMTTSPSAGDDNGKKKESGDADKTAS 413 (413) T ss_pred cccccccccccccCCCCCCCCCccccCC Confidence 9999988766544333222222211111 No 15 >protein:vir:105064 Length: 421 # NCBI annotation: putative portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:1465 # MgeName: phiKO2 # Cross-refs: genbank:acc:YP_006584;genbank:gi:46402090;genbank:GeneID:2777930 Probab=100.00 E-value=7.4e-98 Score=553.10 Aligned_cols=409 Identities=29% Similarity=0.440 Sum_probs=352.1 Q ss_pred CchhhhhhcccccccccccccCCchHHHHHhh--cCCCCcceechhhhhccHHHHHHHHHHHHhhccCceEEEecCCcee Q lcl|Aclame:pro 1 MDSVKKFFNFEKRQTSQVIELNKDDEKLLEWL--GISPSTISVKGKNALKVATVFACIKILSESVSKLPLKIYQEDEYGI 78 (429) Q Consensus 1 Mg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~~ 78 (429) |.+..+|++. ++. .+....+..+.... ..+.++..|+.+.|+++++||+||++||++||++||++|+.++++. T Consensus 1 m~~~~~~~~~-~~~----~s~~~~w~~~~~~~~~~~~~~g~~vt~~~al~~~~v~~~i~~Ia~~iA~lp~~~~~~~~~g~ 75 (421) T protein:vir:10 1 MFIPQMFEGK-KRS----VSGGGFWEAMLGGVRSSHSKAGVMITPETALALSAVRACVTLLAESVAQLPVELYRRDKNGG 75 (421) T ss_pred CCCcchhccc-ccc----cCcchhhHHHhhhhccCcccCCceechHHhhccHHHHHHHHHHHHhhccCceEEEEEcCCCc Confidence 8876655432 111 22222222233222 2345667899999999999999999999999999999999886664 Q ss_pred -eeeecchhhhhhcccCcCCCCHHHHHHHHHHHHHhhCCeEEEEeeCCCCceEEEEeeCCcceEEEEcCCcceeeeeeEE Q lcl|Aclame:pro 79 -QRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVYIDDVGLLNSKTKMW 157 (429) Q Consensus 79 -~~~~~~~~~~~l~~~PN~~~s~~~~~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~l~p~~v~~~~~~~~~~~~~~~~~ 157 (429) ....+|+++++|+.+||++||+++||+.++.+++++||+|++++++..|++.+||||+|+.|++..+.++. .+ T Consensus 76 ~~~~~~~~l~~lL~~~PN~~~t~~~f~~~~~~~lll~Gna~~~i~r~~~G~~~~L~~l~~~~v~v~~~~~g~------~~ 149 (421) T protein:vir:10 76 RQRATDHPIYDLIHSQPNKKDTSFEYFEQQQGLLGLEGNCYSIIDRDGKGYPKELIPINPKKVIVLKGPDGM------PY 149 (421) T ss_pred eeecccchHHHHHhhcccCCCCHHHHHHHHHHHHhhcCCeEEEEEEcCCCcEEEEEEecCceEEEEECCCce------EE Confidence 44668999999999999999999999999999999999999999999999999999999999998876532 23 Q ss_pred EeecccCceEEEccceEEEeecCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHHccCCcceEEEeCCCC----CHHH Q lcl|Aclame:pro 158 YVVNTGGQQRVLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGDL----NEDA 233 (429) Q Consensus 158 ~~~~~~g~~~~~~~~evih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~----~~e~ 233 (429) |.+...| ..+++++|+|++++ +.++++|.||+..+..++....++++++.++|+||++|+|+++.++.+ ++|+ T Consensus 150 y~~~~~g--~~~~~~eiih~~~~-~~d~~~G~spi~~~~~~i~~~~~~~~~~~~~f~ng~~~~gil~~~~~~~~~~~~e~ 226 (421) T protein:vir:10 150 YEIPEIG--ETLPMRMMHHVKVF-SLDGYIGSSPIQTNADVLGLNLAVEEHASAVFRRGATMSGVIERPKEAPAIKSQEK 226 (421) T ss_pred EEEcCCC--cEEchhhEEEecCc-CCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhcCCCccEEEEecCccCccCCHHH Confidence 3344444 36899999999965 567899999999999999999999999999999999999999998755 8999 Q ss_pred HHHHHHHHHHHhcccccccceeecCCCceeEecCCChhHHHHHHHHHHHHHHHHHHhcCChhhcCCccccccccHHHHHH Q lcl|Aclame:pro 234 KKVFRENFESMSSGLQNSHRIALMPVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKATLNNIEQQQQ 313 (429) Q Consensus 234 ~~~~~~~~~~~~~g~~~~~~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~fgvp~~~l~~~~~~~~~n~~~~~~ 313 (429) .+++++.|++.++|..|+++++++++|++|++++++++|+|++|.+++++++||++|||||.+|+..+.++++|.+++.+ T Consensus 227 ~~~~~~~~~~~~~g~~n~~~~~vl~~g~~~~~l~~~~~d~q~~e~~~~~~~~Ia~~fgVPp~~lg~~~~~t~sn~e~~~~ 306 (421) T protein:vir:10 227 IDQLLAKWTDRYSGINNMFSVALLQEGMSYKQMSQDNEKAQLLQSRQWGVEEVCRLYKIPPHMVQMLAKATNNNIEHQGL 306 (421) T ss_pred HHHHHHHHHHHhcCccccCcceecCCCceEEecCCChhHHHHHHHHHHhHHHHHHHhCCCHHHcCCCcCCccccHHHHHH Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred HHHHHHHhHHHHHHHHHHHHhhccchhhcchhhhhhhhhhHhhhhHHHHHHHHHHHHhCCCCCHHHHHHHhCCCCCCCcc Q lcl|Aclame:pro 314 QFYTDTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEAGGD 393 (429) Q Consensus 314 ~~~~~~l~P~~~~i~~~l~~~ll~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~Gl~~~~~gD 393 (429) .|+++||.|++.+||++|+++|+++.+. .+++++||++.+++.|.+++++.+.+++++|+||+||+|+++|+||+|||| T Consensus 307 ~f~~~tl~P~~~~ie~~ln~kL~~~~~~-~~~~v~fd~~~l~~~d~~~~~~~~~~~~~~G~~T~NE~R~~~gl~p~~ggD 385 (421) T protein:vir:10 307 QFVMYTLLAWLKRHEGALQRDLLLPSER-RDLYIEFNVSGLLRGDQKSRYESYALGRQWGWLSVNDIRRMENLPPIAGGD 385 (421) T ss_pred HHHHHHHHHHHHHHHHHHhhhccCcccc-CCeEEEEechhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCcc Confidence 9999999999999999999999988774 688999999999999999999999999999999999999999999999999 Q ss_pred eeeeccccccccccccccCCCCCCCCCCCCCCCCCC Q lcl|Aclame:pro 394 RLLVNGNMLPIDMAGQAYLKGGDTNGEVSKEGNEGN 429 (429) Q Consensus 394 ~~~~~~n~~~~~~~~~~~~~~g~~~~~~~~~~~~~n 429 (429) ++++|+|++++..... ++.....++.+.+|+ T Consensus 386 ~~~~~~n~~~~~~~~~-----~~~~~~~~~~~e~d~ 416 (421) T protein:vir:10 386 KYLTPLNMVDSAQIIP-----GDKKPTAQQMAEIDT 416 (421) T ss_pred eeeecccccccccccc-----CCCCcccccCccccc Confidence 9999999987765421 222222233333333 No 16 >protein:vir:1884 Length: 424 # NCBI annotation: head portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:41 # MgeName: HK022 # Cross-refs: genbank:acc:NP_037664;genbank:gi:9634122;genbank:GeneID:1262519 Probab=100.00 E-value=5e-98 Score=554.01 Aligned_cols=405 Identities=22% Similarity=0.381 Sum_probs=349.3 Q ss_pred Cchhhhhhcccccccccccc-cCCchHHHHHhhcCCCCcceechhhhhccHHHHHHHHHHHHhhccCceEEEecCCceee Q lcl|Aclame:pro 1 MDSVKKFFNFEKRQTSQVIE-LNKDDEKLLEWLGISPSTISVKGKNALKVATVFACIKILSESVSKLPLKIYQEDEYGIQ 79 (429) Q Consensus 1 Mg~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~~~ 79 (429) =|||+++.+++...+..... .+...+ + .+ ..+.+...++.+.|+++++||+||++||++||++||++++.++++.. T Consensus 14 ~g~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~-~~~~~~~~v~~~~al~~~~v~~cv~~Ia~~iA~lp~~~~~~~~~~~~ 90 (424) T protein:vir:18 14 NGWWARLQSWFVGGRLVTPNQGSQTGP-V-SA-HGHLGDSSINDERILQISTVWRCVSLISTLTACLPLDVFETDQNDNR 90 (424) T ss_pred CchHHHHHhhhcccccccccccccccc-c-cc-ccccccccccHHHhhccHHHHHHHHHHHHhhccCceEEEEeecCCce Confidence 57788777766543221111 111111 1 11 12334557899999999999999999999999999999998776543 Q ss_pred --eeecchhhhhhcccCcCCCCHHHHHHHHHHHHHhhCCeEEEEeeCCCCceEEEEeeCCcceEEEEcCCcceeeeeeEE Q lcl|Aclame:pro 80 --RGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVYIDDVGLLNSKTKMW 157 (429) Q Consensus 80 --~~~~~~~~~~l~~~PN~~~s~~~~~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~l~p~~v~~~~~~~~~~~~~~~~~ 157 (429) ....|+++++|+.+||++||+++||+.++.+++++||+|++++++..|++.+|||++|++|++..+++ ... T Consensus 91 ~~~~~~~~l~~lL~~~PN~~~t~~~f~~~~~~~lll~Gnay~~i~r~~~G~~~~L~pl~~~~V~v~~~~~-------~~~ 163 (424) T protein:vir:18 91 KKVDLSNPLARLLRYSPNQYMTAQEFREAMTMQLCFYGNAYALVDRNSAGDVISLLPLQSANMDVKLVGK-------KVV 163 (424) T ss_pred eeeccccHHHHHHhhccCCCCCHHHHHHHHHHHHhhcCCeEEEEEECCCCcEEEEEEecCcceEEEEcCC-------eEE Confidence 34579999999999999999999999999999999999999999999999999999999999977653 234 Q ss_pred EeecccCceEEEccceEEEeecCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHHccCCcceEEEeCCC-CCHHHHHH Q lcl|Aclame:pro 158 YVVNTGGQQRVLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGD-LNEDAKKV 236 (429) Q Consensus 158 ~~~~~~g~~~~~~~~evih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~-~~~e~~~~ 236 (429) |.+..+|..+.|+++||||||+++ .++.+|+||+.++...+.++.+++++..++|+||++|+|+++++.. +++++.++ T Consensus 164 y~~~~~g~~~~~~~~eIih~r~~~-~dg~~G~spi~~~~~~i~~~~a~~~~~~~~f~ng~~p~gil~~~~~~l~~e~~~~ 242 (424) T protein:vir:18 164 YRYQRDSEYADFSQKEIFHLKGFG-FTGLVGLSPIAFACKSAGVAVAMEDQQRDFFANGAKSPQILSTGEKVLTEQQRSQ 242 (424) T ss_pred EEEEeCCeEEEeccccEEEecCcC-CCCcccccHHHHHHHHHHHHHHHHHHHHHHHHccCCcceEEEeCCcCCCHHHHHH Confidence 556677888899999999999765 5678999999999999999999999999999999999999999865 79999999 Q ss_pred HHHHHHHHhcccccccceeecCCCceeEecCCChhHHHHHHHHHHHHHHHHHHhcCChhhcCCcccccc--ccHHHHHHH Q lcl|Aclame:pro 237 FRENFESMSSGLQNSHRIALMPVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKATL--NNIEQQQQQ 314 (429) Q Consensus 237 ~~~~~~~~~~g~~~~~~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~fgvp~~~l~~~~~~~~--~n~~~~~~~ 314 (429) +++.|++.++| .|+|+++||++|++|++++++++|+|++|.+++++++||++|||||.+||..+.+++ +|.+++... T Consensus 243 ~~~~~~~~~~g-~nag~~~vl~~g~~~~~l~~~~~d~q~le~~~~~~~~Ia~~fgVPp~~lg~~~~~t~~~sn~eq~~~~ 321 (424) T protein:vir:18 243 VEENFKEIAGG-PVKKRLWILEAGFSTSAIGVTPQDAEMMASRKFQVSELARFFGVPPHLVGDVEKSTSWGSGIEQQNLG 321 (424) T ss_pred HHHHHHHHhCC-cccCCceeccCCceEEecCCChhHHHHHHHHHHHHHHHHHHhCCCHHHhCCCCCcccccccHHHHHHH Confidence 99999988876 688999999999999999999999999999999999999999999999998776654 899999999 Q ss_pred HHHHHHhHHHHHHHHHHHHhhccchhhcchhhhhhhhhhHhhhhHHHHHHHHHHHHhCCCCCHHHHHHHhCCCCCCCcce Q lcl|Aclame:pro 315 FYTDTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEAGGDR 394 (429) Q Consensus 315 ~~~~~l~P~~~~i~~~l~~~ll~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~Gl~~~~~gD~ 394 (429) |+++||.|+++.||++|+++|+++.+. .+++++||++.+++.|.+++++.+.+++++|+||+||+|+++|+||+||||+ T Consensus 322 f~~~tl~P~~~~ie~~l~~~L~~~~~~-~~~~~~fd~~~llr~d~~~r~~~~~~~~~~G~~T~NE~R~~~gl~pi~gGD~ 400 (424) T protein:vir:18 322 FLQYTLQPYISRWENSIQRWLIPAKDV-GRIHAEHNLDGLLRGDSASRAAFMKAMGEAGLRTINEMRRTDNLPPLPGGDV 400 (424) T ss_pred HHHHHHHHHHHHHHHHHHhhcCCcccc-CCeEEEEechhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCcCe Confidence 999999999999999999999998875 5789999999999999999999999999999999999999999999999999 Q ss_pred eeeccccccccccccccCCCCCCCCCCCCCCC Q lcl|Aclame:pro 395 LLVNGNMLPIDMAGQAYLKGGDTNGEVSKEGN 426 (429) Q Consensus 395 ~~~~~n~~~~~~~~~~~~~~g~~~~~~~~~~~ 426 (429) +++++|++|++..++...+ .+++. T Consensus 401 ~~~~~n~~~l~~~~~~~~p--------~~~ga 424 (424) T protein:vir:18 401 AMRQSQYVPITDLGTNKEP--------RNNGA 424 (424) T ss_pred eeeccCccchHhhhccCCC--------ccCCC Confidence 9999999999865532211 11111 No 17 >protein:vir:93610 Length: 454 # NCBI annotation: putative portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:157 # MgeName: phi 4795 # Cross-refs: genbank:acc:YP_001449295;genbank:gi:157166043;interpro:IPR006427;interpro:IPR006944;uniprot:Q6H9U6;genbank:GeneID:5580432 Probab=100.00 E-value=1.2e-97 Score=551.92 Aligned_cols=417 Identities=22% Similarity=0.356 Sum_probs=352.6 Q ss_pred hhccccccccccc---cc--CCch---HHHHH-hhcCCCCcceechhhhhccHHHHHHHHHHHHhhccCceEEEecCCce Q lcl|Aclame:pro 7 FFNFEKRQTSQVI---EL--NKDD---EKLLE-WLGISPSTISVKGKNALKVATVFACIKILSESVSKLPLKIYQEDEYG 77 (429) Q Consensus 7 ~~~~~~~~~~~~~---~~--~~~~---~~~~~-~~~~~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~ 77 (429) ||+++++.+.... .. .... ..+.+ +.|.+.++..|+.+.|+++++||+||++||++||++||++|+.++++ T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~v~~~~al~~~~V~~~v~~Ia~~iA~lp~~~~~~~~~g 80 (454) T protein:vir:93 1 MWNLLRRTRKNQKSGRDVREAGWTSLFQAVAEPFAGAWQQGVKADPEAVLSFHAVFACISLISQDIAKMRLRLMQTDAQG 80 (454) T ss_pred CCCccccCcccccccccccchhhhhhhhhhhhhhcchhhcCcccChHHhhccHHHHHHHHHHHHhhccCceEEEEeccCC Confidence 4444443221111 11 1111 11222 34567788899999999999999999999999999999999998888 Q ss_pred eeeeecchhhhhhcccCcCCCCHHHHHHHHHHHHHhhCCeEEEEeeCCCCceEEEEeeCCcceEEEEcCCcceeeeeeEE Q lcl|Aclame:pro 78 IQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVYIDDVGLLNSKTKMW 157 (429) Q Consensus 78 ~~~~~~~~~~~~l~~~PN~~~s~~~~~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~l~p~~v~~~~~~~~~~~~~~~~~ 157 (429) ......|+.+++|+.+||++||+++||+.++.+++++||+|++++++..|++.+|||++|++|++..+.++...+.... T Consensus 81 ~~~~~~~~~~~~L~~~PN~~~t~~~f~~~l~~~lll~Gna~~~i~r~~~G~~~~L~~i~~~~v~v~~~~~g~~~y~~~~- 159 (454) T protein:vir:93 81 IRRETRRGDIARLCRRPNAQQNRIQFFELWLNAKLRHGNTVVLKIRNARGQIKELRILDWNRVEPLVADDGEVFYRITP- 159 (454) T ss_pred ccchhhhHHHHHHHhcCCCCCCHHHHHHHHHHHHhhcCceEEEEEECCCCcEEEEEEEcCcceEEEEcCCCcEEEEEEe- Confidence 7777777777777789999999999999999999999999999999999999999999999999998876543222111 Q ss_pred EeecccCceEEEccceEEEeecCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHHccCCcceEEEeCCCCCHHHHHHH Q lcl|Aclame:pro 158 YVVNTGGQQRVLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGDLNEDAKKVF 237 (429) Q Consensus 158 ~~~~~~g~~~~~~~~evih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~~e~~~~~ 237 (429) ......+....|+++||||++++.+.++.+|+||+..+...+.+..+++++..++|+||++|+|++++++.+++++.+++ T Consensus 160 ~~~~~~~~~~~~~~~eViH~k~~~~~~~~~G~sp~~~~~~~i~~~~~~~~~~~~~f~ng~~p~gil~~~~~l~~e~~~~~ 239 (454) T protein:vir:93 160 DRNCGITEAVTVPAREVIHDRFNCFFHPLIGLPPVYAAGLAATQGHHIQENSTSFFRNGGRPSGVIEIPGSITEENAKKL 239 (454) T ss_pred ccccccceeEEecCcceEEeccCCCCCCceeccHHHHHHHHHHHHHHHHHHHHHHHhccCCccEEEecCCCCCHHHHHHH Confidence 11112244678999999999988888999999999999999999999999999999999999999999999999999999 Q ss_pred HHHHHHHhcccccccceeecCCCceeEecCCChhHHHHHHHHHHHHHHHHHHhcCChhhcCCccccccccHHHHHHHHHH Q lcl|Aclame:pro 238 RENFESMSSGLQNSHRIALMPVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKATLNNIEQQQQQFYT 317 (429) Q Consensus 238 ~~~~~~~~~g~~~~~~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~fgvp~~~l~~~~~~~~~n~~~~~~~~~~ 317 (429) +++|++.++| .|+|+++|+++|++|+++++++.|+||+|.+++.+++||++|||||.+||..+.++++|.+++.+.|++ T Consensus 240 ~~~~~~~~~g-~n~g~~~vl~~g~~~~~l~~~~~d~q~le~~~~~~~~Ia~~fgVPp~~lg~~~~~t~sn~e~~~~~f~~ 318 (454) T protein:vir:93 240 KSNWDSGYTG-ENAGKTAILSNGAKYNPTTFSPVDSQTVEQLKMTAEIVCSVFRVPAYKIGVGQPPSSDNVEALEQQYYS 318 (454) T ss_pred HHHHHHHhcc-cccCCceeccCCceEEEcccChhHHHHHHHHHHHHHHHHHHhCCCHHHcCCCCCCcchhHHHHHHHHHH Confidence 9999999988 689999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred HHHhHHHHHHHHHHHHhhccchhhcchhhhhhhhhhHhhhhHHHHHHHHHHHHhCCCCCHHHHHHHhCCCCCCCcceeee Q lcl|Aclame:pro 318 DTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEAGGDRLLV 397 (429) Q Consensus 318 ~~l~P~~~~i~~~l~~~ll~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~Gl~~~~~gD~~~~ 397 (429) .+|.|++..|+++|+++|+... +++++||++.+++.|.+++++.+.+++++|++|+||+|+++|+||+||||++++ T Consensus 319 ~~l~P~~~~ie~~ln~~L~~~~----~~~~~f~~~~ll~~D~~~r~~~~~~~~~~G~~T~NE~R~~~gl~pi~ggD~~~~ 394 (454) T protein:vir:93 319 QCLQTLIESIELLLDEALETGE----NESTEFDVTTLLRMDSERRMKTLGDAVKNTLLTPNEARKRENLPPLAGGDALYL 394 (454) T ss_pred HHHHHHHHHHHHHHHHhhcCCC----CcEEEeechhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCeeee Confidence 9999999999999999998653 568999999999999999999999999999999999999999999999999999 Q ss_pred ccccccccccccccCCCC------CCCCC-CCCCCCCCC Q lcl|Aclame:pro 398 NGNMLPIDMAGQAYLKGG------DTNGE-VSKEGNEGN 429 (429) Q Consensus 398 ~~n~~~~~~~~~~~~~~g------~~~~~-~~~~~~~~n 429 (429) +.|+.|++..++++.... ....+ ++.+++|+| T Consensus 395 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 433 (454) T protein:vir:93 395 QQQNYSLEALSRRDAREDPFASSGKTASVPQAVAASDGN 433 (454) T ss_pred ccCccchHhhhccCcccCCCCCCccCCCCCCCCCCCCCC Confidence 999998877654432211 11111 122333333 No 18 >protein:vir:189 Length: 424 # NCBI annotation: portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:6 # MgeName: HK97 # Cross-refs: genbank:acc:NP_037699;genbank:gi:9634156;genbank:GeneID:1262529 Probab=100.00 E-value=9.6e-98 Score=552.48 Aligned_cols=406 Identities=22% Similarity=0.380 Sum_probs=349.3 Q ss_pred CchhhhhhcccccccccccccCCchHHHHHhhcCCCCcceechhhhhccHHHHHHHHHHHHhhccCceEEEecCCceee- Q lcl|Aclame:pro 1 MDSVKKFFNFEKRQTSQVIELNKDDEKLLEWLGISPSTISVKGKNALKVATVFACIKILSESVSKLPLKIYQEDEYGIQ- 79 (429) Q Consensus 1 Mg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~~~- 79 (429) =|||+++.+++++.+............+ .+ ..+.+...++.+.|+++++||+||++||++||++|+++|+.++++.. T Consensus 14 ~g~~~~~~~~f~~~~~~~~~~~~~~~~~-~~-~~~~~~~~v~~~~al~~~~v~~cv~~Ia~~iA~lp~~vy~~~~~~~~~ 91 (424) T protein:vir:18 14 NGWWARLKSWFVGGRLVTPNQGSQTGPV-SA-HGYLGDSSINDERILQISTVWRCVSLISTLTACLPLDVFETDQNDNRK 91 (424) T ss_pred CchHHHHHhhccccccccccchhhcccc-cc-ccccccccccHHHhhccHHHHHHHHHHHHhhccCceEEEEeccCCcee Confidence 5778887777655432221111100111 11 11234456888999999999999999999999999999998776533 Q ss_pred -eeecchhhhhhcccCcCCCCHHHHHHHHHHHHHhhCCeEEEEeeCCCCceEEEEeeCCcceEEEEcCCcceeeeeeEEE Q lcl|Aclame:pro 80 -RGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVYIDDVGLLNSKTKMWY 158 (429) Q Consensus 80 -~~~~~~~~~~l~~~PN~~~s~~~~~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~l~p~~v~~~~~~~~~~~~~~~~~~ 158 (429) ....|+++++|+.+||++||+++||+.++.+++++||+|++++|+..|++.+|||++|++|++..+++ ...| T Consensus 92 ~~~~~~~l~~lL~~~PN~~~t~~~f~~~~~~~lll~Gnay~~i~r~~~G~~~~L~~l~~~~v~v~~~~~-------~~~y 164 (424) T protein:vir:18 92 KVDLSNPLARLLRYSPNQYMTAQEFREAMTMQLCFYGNAYALVDRNSAGDVISLLPLQSANMDVKLVGK-------KVVY 164 (424) T ss_pred eeccccHHHHHHhhccCCCCCHHHHHHHHHHHHhhcCCeEEEEEECCCCcEEEEEEecCcceEEEEcCC-------eEEE Confidence 34679999999999999999999999999999999999999999999999999999999999987653 2235 Q ss_pred eecccCceEEEccceEEEeecCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHHccCCcceEEEeCCC-CCHHHHHHH Q lcl|Aclame:pro 159 VVNTGGQQRVLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGD-LNEDAKKVF 237 (429) Q Consensus 159 ~~~~~g~~~~~~~~evih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~-~~~e~~~~~ 237 (429) .+..+|..+.|+++||||+|+++ .++.+|+||+..+...+.++.+++++..++|+||++|+|+++++.. +++++.+++ T Consensus 165 ~~~~~g~~~~~~~~eVihir~~~-~dg~~G~spi~~~~~~i~~~~~~~~~~~~~f~ng~~~~gil~~~~~~l~~e~~~~~ 243 (424) T protein:vir:18 165 RYQRDSEYADFSQKEIFHLKGFG-FTGLVGLSPIAFACKSAGVAVAMEDQQRDFFANGAKSPQILSTGEKVLTEQQRSQV 243 (424) T ss_pred EEEeCCeEEEeccccEEEecCcC-CCCcccccHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEeCCcCCCHHHHHHH Confidence 56677888899999999999765 5678999999999999999999999999999999999999999876 699999999 Q ss_pred HHHHHHHhcccccccceeecCCCceeEecCCChhHHHHHHHHHHHHHHHHHHhcCChhhcCCcccccc--ccHHHHHHHH Q lcl|Aclame:pro 238 RENFESMSSGLQNSHRIALMPVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKATL--NNIEQQQQQF 315 (429) Q Consensus 238 ~~~~~~~~~g~~~~~~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~fgvp~~~l~~~~~~~~--~n~~~~~~~~ 315 (429) ++.|++.++| .++|+++||++|++|+++++++.|+|++|.+++++++||++|||||.+||..+.+++ +|.+++..+| T Consensus 244 ~~~~~~~~~~-~nag~~~vl~~g~~~~~l~~~~~d~q~~e~~~~~~~~Ia~~fgVPp~~lg~~~~~t~~~sn~eq~~~~f 322 (424) T protein:vir:18 244 EENFKEIAGG-PVKKRLWILEAGFSTSAIGVTPQDAEMMASRKFQVSELARFFGVPPHLVGDVEKSTSWGSGIEQQNLGF 322 (424) T ss_pred HHHHHHHhCC-cccCCceeccCCceEEecCCChhHHHHHHHHHHhHHHHHHHhCCCHHHhCCCCCcccccccHHHHHHHH Confidence 9999987766 688999999999999999999999999999999999999999999999998776655 8999999999 Q ss_pred HHHHHhHHHHHHHHHHHHhhccchhhcchhhhhhhhhhHhhhhHHHHHHHHHHHHhCCCCCHHHHHHHhCCCCCCCccee Q lcl|Aclame:pro 316 YTDTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEAGGDRL 395 (429) Q Consensus 316 ~~~~l~P~~~~i~~~l~~~ll~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~Gl~~~~~gD~~ 395 (429) ++.||.|++++||++|+++|+++.+. .+++++||++.+++.|.+++++.+.+++++|+||+||+|+++|+||+||||++ T Consensus 323 ~~~tl~P~~~~ie~~ln~~L~~~~~~-~~~~~~fd~~~llr~d~~~r~~~~~~~~~~G~~T~NE~R~~~gl~pi~ggD~~ 401 (424) T protein:vir:18 323 LQYTLQPYISRWENSIQRWLIPSKDV-GRLHAEHNLDGLLRGDSASRAAFMKAMGESGLRTINEMRRTDNMPPLPGGDVA 401 (424) T ss_pred HHHHHHHHHHHHHHHHHhhcCCcccc-CCeEEEEechhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCcCee Confidence 99999999999999999999998876 47899999999999999999999999999999999999999999999999999 Q ss_pred eeccccccccccccccCCCCCCCCCCCCCCC Q lcl|Aclame:pro 396 LVNGNMLPIDMAGQAYLKGGDTNGEVSKEGN 426 (429) Q Consensus 396 ~~~~n~~~~~~~~~~~~~~g~~~~~~~~~~~ 426 (429) ++++|++|++..++...+ .+++. T Consensus 402 ~~~~n~~~l~~~~~~~~~--------~~n~a 424 (424) T protein:vir:18 402 MRQAQYVPITDLGTNKEP--------RNNGA 424 (424) T ss_pred eeccCccchhhhhccCCc--------cccCC Confidence 999999999876532211 11111 No 19 >protein:vir:100150 Length: 437 # NCBI annotation: gp3 # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:1639 # MgeName: phi1026b # Cross-refs: genbank:acc:NP_945033;genbank:gi:38707893;genbank:GeneID:2744197 Probab=100.00 E-value=5e-97 Score=548.52 Aligned_cols=421 Identities=26% Similarity=0.405 Sum_probs=355.4 Q ss_pred Cch-hhhhhccccccccc--ccccCCchHHHHHhhcC--CCCcceechhhhhccHHHHHHHHHHHHhhccCceEEEecCC Q lcl|Aclame:pro 1 MDS-VKKFFNFEKRQTSQ--VIELNKDDEKLLEWLGI--SPSTISVKGKNALKVATVFACIKILSESVSKLPLKIYQEDE 75 (429) Q Consensus 1 Mg~-~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~--~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~ 75 (429) |.. ++++++.++.+-.. ..+.+..+..+.++++. +.+...++.+.|+++++||+||++||++||++||++++.++ T Consensus 1 ~~~~~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~g~~v~~~~al~~~~v~~ci~~Ia~~ia~lp~~~~~~~~ 80 (437) T protein:vir:10 1 MKQGKQRALGRIKSSFLKWLGVPISLTDGSFWSAWGGMGSSSGETVTADSALQLSAVWSCVRLIAETIATLPLNLYQTKP 80 (437) T ss_pred CCcchhhhhhhhHHhhhhhcCCcccCCchhHHHhhcccccCCCceechHhhhccHHHHHHHHHHHHHHhhCceeEEEEcC Confidence 773 33444433322111 11223333444454443 35566788999999999999999999999999999999887 Q ss_pred cee-eeeecchhhhhhcccCcCCCCHHHHHHHHHHHHHhhCCeEEEEeeCCCCceEEEEeeCCcceEEEEcCCcceeeee Q lcl|Aclame:pro 76 YGI-QRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVYIDDVGLLNSKT 154 (429) Q Consensus 76 ~~~-~~~~~~~~~~~l~~~PN~~~s~~~~~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~l~p~~v~~~~~~~~~~~~~~ 154 (429) ++. .....|+++++|+.+||++|++++||+.++.+++++||+|++++++ .|++++|||++|+.|++..+.++. T Consensus 81 ~g~~~~~~~~~l~~lL~~~PN~~~t~~~f~~~~~~~lll~Gnay~~i~r~-~g~~~~L~~l~p~~v~i~~~~~g~----- 154 (437) T protein:vir:10 81 DGTRVLAKQHRLYTVIHSQPNAENTAAEFWEVIVASMLLWGNGYARKLRS-AGVLIGLELMLPQRTTVKRLTSGA----- 154 (437) T ss_pred CCceeeccccHHHHHhhccCCcCCCHHHHHHHHHHHHhhcCCeEEEEEec-CCcEEEEEEEcCcceEEEECCCCe----- Confidence 764 4556899999999999999999999999999999999999999998 599999999999999998876432 Q ss_pred eEEEeecccCceEEEccceEEEeecCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHHccCCcceEEEeCCCCCHHHH Q lcl|Aclame:pro 155 KMWYVVNTGGQQRVLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGDLNEDAK 234 (429) Q Consensus 155 ~~~~~~~~~g~~~~~~~~evih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~~e~~ 234 (429) ..|++...+|..+.|+++||||||+++ .++.+|+||+.++..++.+..+++++..++|+||++|+|++++++.+++++. T Consensus 155 ~~y~~~~~~g~~~~~~~~dIih~r~~~-~d~~~G~spi~~~~~~i~~~~~~~~~~~~~f~ng~~p~gil~~~~~l~~e~~ 233 (437) T protein:vir:10 155 LQYTYRNVDGTVSTLAEDDVFHVRGFS-LDGLMGLTPIQYAREVLGNSTAANKTSASVFRNGLRPSGVLSTDQILQKEKR 233 (437) T ss_pred EEEEEEecCceEEEEccccEEEecCcC-CCCcccccHHHHHHHHHHHHHHHHHHHHHHHhccCCccEEEEcCCCCCHHHH Confidence 234455667888899999999999764 6789999999999999999999999999999999999999999999999999 Q ss_pred HHHHHHHHHHhcccccccceeecCCCceeEecCCChhHHHHHHHHHHHHHHHHHHhcCChhhcCCccccc--cccHHHHH Q lcl|Aclame:pro 235 KVFRENFESMSSGLQNSHRIALMPVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKAT--LNNIEQQQ 312 (429) Q Consensus 235 ~~~~~~~~~~~~g~~~~~~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~fgvp~~~l~~~~~~~--~~n~~~~~ 312 (429) +++++.|++.++|..|+|+++|+++|++|+++++++.|+||+|.+++++++||++|||||.+||..+.++ ++|.+++. T Consensus 234 ~~~~~~~~~~~~g~~nag~~~vl~~g~~~~~l~~~~~d~q~~e~~~~~~~~Ia~~fgVPp~~lg~~~~~t~~~sn~e~~~ 313 (437) T protein:vir:10 234 AEIRTDLAEQFGGAMQAGKTMVLEAGMKYQAITMNPGDVQLLETRAFNIEEICRWYRVPPFMVGHSEKSTSWGTGIEQQT 313 (437) T ss_pred HHHHHHHHHHhcCccccCcceeccCCceEEeccCChhhHHHHHHHHHHHHHHHHHhCCCHHHhCCCCCcccccchHHHHH Confidence 9999999999999999999999999999999999999999999999999999999999999999877664 48999999 Q ss_pred HHHHHHHHhHHHHHHHHHHHHhhccchhhcchhhhhhhhhhHhhhhHHHHHHHHHHHHhCCCCCHHHHHHHhCCCCCCCc Q lcl|Aclame:pro 313 QQFYTDTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEAGG 392 (429) Q Consensus 313 ~~~~~~~l~P~~~~i~~~l~~~ll~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~Gl~~~~~g 392 (429) +.|++.||.|++..|+++|+++||++.+.. +++++||++.+++.|.+++++++.+++++|++|+||+|+++|+||+||| T Consensus 314 ~~f~~~tl~P~~~~ie~~l~~kll~~~e~~-~~~~~fd~~~ll~~d~~~r~~~~~~~~~~G~~T~NE~R~~~gl~pi~gg 392 (437) T protein:vir:10 314 LGFLTFTLRPWLTRIEQAARRSLLRPGERD-QFYAEFSVEGLLRADSAGRAAFYSTMTQNGLMTRDECRAKENLPPMGGN 392 (437) T ss_pred HHHHHHHHHHHHHHHHHHHHhhccCccccC-ceEEEEechhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCC Confidence 999999999999999999999999887654 5789999999999999999999999999999999999999999999987 Q ss_pred cee-eeccccccccccccccCCCCCCCCCCCCCCCCC------C Q lcl|Aclame:pro 393 DRL-LVNGNMLPIDMAGQAYLKGGDTNGEVSKEGNEG------N 429 (429) Q Consensus 393 D~~-~~~~n~~~~~~~~~~~~~~g~~~~~~~~~~~~~------n 429 (429) |.+ ++++|++|++..+++...++..+.....+.++. + T Consensus 393 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e 436 (437) T protein:vir:10 393 AAVLTVQSALLPIDKLGEHTTATAAQDALKAWLYQEEKTRATQE 436 (437) T ss_pred cceEeecCcccchhhccCcCCCcchhccccccCCCCCCCCcccc Confidence 764 578999998887765544332222111111111 1 No 20 >protein:vir:10362 Length: 432 # NCBI annotation: head portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:183 # MgeName: Xp10 # Cross-refs: genbank:acc:NP_858954;genbank:gi:32128419;genbank:GeneID:2648396 Probab=100.00 E-value=8.8e-97 Score=547.18 Aligned_cols=415 Identities=22% Similarity=0.342 Sum_probs=350.0 Q ss_pred Cchhhhhhcccccccccccc----cCCchHHHHHh--hcCCCCcceechhhhhccHHHHHHHHHHHHhhccCceEEEecC Q lcl|Aclame:pro 1 MDSVKKFFNFEKRQTSQVIE----LNKDDEKLLEW--LGISPSTISVKGKNALKVATVFACIKILSESVSKLPLKIYQED 74 (429) Q Consensus 1 Mg~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~--~~~~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~ 74 (429) ||+|+++..++.+....... .+.. ...... ...+.++..|+.+.|+++++||+||++||++||++||++|+++ T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~s~~g~~v~~~~al~~~~V~~~i~~Ia~~ia~lp~~~y~~~ 85 (432) T protein:vir:10 7 LGLLGQLKAMFVPPDPVDIGGGQTFTPV-NATARDLGIIISDTGAAVNADAIMRLDAVAACVKLVSQAIAAMPLTMYMRT 85 (432) T ss_pred cchhhhhHhhcCCccccccccccccccC-cchhhhhcccccccCcccchhhhhcchHHHHHHHHHHHhhhhCceeEEEec Confidence 99999877666554321111 1111 111111 2345677889999999999999999999999999999999999 Q ss_pred CceeeeeecchhhhhhcccCcCCCCHHHHHHHHHHHHHhhCCeEEEEeeCCCCceEEEEeeCCcceEEEEcCCcceeeee Q lcl|Aclame:pro 75 EYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVYIDDVGLLNSKT 154 (429) Q Consensus 75 ~~~~~~~~~~~~~~~l~~~PN~~~s~~~~~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~l~p~~v~~~~~~~~~~~~~~ 154 (429) ++++.....|+++++|+.+||++||+++||+.++.+++++||||++++++ .|++.+||||+|+.|++..+.++. T Consensus 86 ~~g~~~~~~~~l~~lL~~~PN~~~t~~~f~~~l~~~lll~Gnay~~~~~~-~g~~~~L~~l~~~~v~v~~~~~g~----- 159 (432) T protein:vir:10 86 PDGRKEAVNHPLYTLLLDGPNSTQTAFDFWQVVVTRLLLDGTAYVRKVVT-DGRIESLQYLANDRLTITTDTKGN----- 159 (432) T ss_pred CCCcccccccHHHHHHHhcccccCCHHHHHHHHHHHHhhcCCeEEEEEec-CCcEEEEEEEcCCceEEEEcCCCc----- Confidence 88888888999999999999999999999999999999999999999997 599999999999999999876543 Q ss_pred eEEEeecccCceEEEccceEEEeecCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHHccCCcceEEEeCCCCCHHHH Q lcl|Aclame:pro 155 KMWYVVNTGGQQRVLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGDLNEDAK 234 (429) Q Consensus 155 ~~~~~~~~~g~~~~~~~~evih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~~e~~ 234 (429) ..|+++..+|..+.|++++|||++++ +.++.+|+||+..+.+.+.++.+++++..++|+||++|+|++++++.+++|++ T Consensus 160 ~~y~~~~~~g~~~~~~~~~iih~~~~-~~dg~~G~spi~~~~~~i~~~~~~~~~~~~~f~ng~~~~gil~~~~~l~~e~~ 238 (432) T protein:vir:10 160 TAYRYRRTDGQMIDIPKQQIWKIMGY-SLDGENGLSAIRYGAQIFGTAIAAEAQAARAFRNGQLQSVYYQIDRFLTDDQY 238 (432) T ss_pred EEEEEEecCceEEEEcCccEEEecCC-CCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhcCCCcceEEecCCCCCHHHH Confidence 23445566788899999999999955 66789999999999999999999999999999999999999999999999998 Q ss_pred HHHHHHHHHHhcccccccceeecCCCceeEecCCChhHHHHHHHHHHHHHHHHHHhcCChhhcCCccccc---cccHHHH Q lcl|Aclame:pro 235 KVFRENFESMSSGLQNSHRIALMPVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKAT---LNNIEQQ 311 (429) Q Consensus 235 ~~~~~~~~~~~~g~~~~~~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~fgvp~~~l~~~~~~~---~~n~~~~ 311 (429) +++++.|. |..|+|++++|++|++|++++++++|+||+|.+++++++||++|||||.+||..+.++ ++|.+++ T Consensus 239 ~~~~~~~~----~~~nag~~~vl~~g~~~~~l~~~~~d~q~le~~~~~~~~Ia~afgVPp~~lg~~~~~t~~~~sn~e~~ 314 (432) T protein:vir:10 239 DSFAKKVS----GSVEAGRAPLLEGGMDVKSLGLNPVDAQLLQSRQYSVESICRFFGVPPSMIGHSSAGTTSWGSGIESQ 314 (432) T ss_pred HHHHHHHh----hhhhCCCceecCCCceEEEccCChHHHHHHHHHHHHHHHHHHHhCCCHHHcCCccCCcccccchHHHH Confidence 88777664 5678899999999999999999999999999999999999999999999999876544 5889999 Q ss_pred HHHHHHHHHhHHHHHHHHHHHHhhccchhhcchhhhhhhhhhHhhhhHHHHHHHHHHHHhCCCCCHHHHHHHhCCCCCCC Q lcl|Aclame:pro 312 QQQFYTDTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEAG 391 (429) Q Consensus 312 ~~~~~~~~l~P~~~~i~~~l~~~ll~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~Gl~~~~~ 391 (429) .+.|+++||.|+++.||++|+++|+++.+. .+++++||++.+++.|.+++++.+.+++++|+||+||+|+++||||++| T Consensus 315 ~~~f~~~tl~P~~~~ie~~ln~kL~~~~~~-~~~~~~fd~~~ll~~d~~~r~~~~~~~~~~G~~T~NE~R~~~glppi~g 393 (432) T protein:vir:10 315 QLGFLSMTLSPWLRRIEQSIALNLLSPAER-RRYFADFDTSALLRADSAARSSYYSQLVNNGLMTRDEAREIEGLPKLGG 393 (432) T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcCcccc-CceEEEeechhhhccCHHHHHHHHHHHHhCCCCCHHHHHHHhCCCCCCC Confidence 999999999999999999999999988764 5689999999999999999999999999999999999999999999997 Q ss_pred cce-eeeccccccccccccccCCCCCCCCCCCCCCCCCC Q lcl|Aclame:pro 392 GDR-LLVNGNMLPIDMAGQAYLKGGDTNGEVSKEGNEGN 429 (429) Q Consensus 392 gD~-~~~~~n~~~~~~~~~~~~~~g~~~~~~~~~~~~~n 429 (429) +|. +.++.|++|++..+++.... ...++++.+.++.. T Consensus 394 ~~~~~~~~~~~~pl~~~~~~~~~~-~~~~~~~~~~~~~~ 431 (432) T protein:vir:10 394 NAAVLTVQSAMVPLDSIGLQASPE-PASGLGNQQQDKVS 431 (432) T ss_pred CcceEeecCcccchhhhcccCCCC-CCCCCCCccccccc Confidence 754 56899999988765432211 11111111111111 No 21 >protein:vir:81072 Length: 432 # NCBI annotation: p07 # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:1889 # MgeName: Xop411 # Cross-refs: genbank:acc:YP_001285677;genbank:gi:148727185;genbank:GeneID:5247117 Probab=100.00 E-value=1e-96 Score=546.80 Aligned_cols=416 Identities=23% Similarity=0.332 Sum_probs=349.2 Q ss_pred Cchhhhhhccccccccccccc---CCchHHHHHh--hcCCCCcceechhhhhccHHHHHHHHHHHHhhccCceEEEecCC Q lcl|Aclame:pro 1 MDSVKKFFNFEKRQTSQVIEL---NKDDEKLLEW--LGISPSTISVKGKNALKVATVFACIKILSESVSKLPLKIYQEDE 75 (429) Q Consensus 1 Mg~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~--~~~~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~ 75 (429) ||+|+|+..++.+........ ..+....... ...+.+...|+.+.|+++++||+||++||++||++|+++|++++ T Consensus 7 mg~f~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~al~~~~V~~~i~~Ia~~ia~lp~~~y~~~~ 86 (432) T protein:vir:81 7 LGLFGQLKAMFVPPDPVDIGGGQTFTPVNATARDLGIIISDTGAAVNADAIMRLDAVAACVKLVSQAIAAMPLTMYMRTP 86 (432) T ss_pred cchhhhhhhhcccccccccccccccccCccchhhhcccccccCcccchHhhhccHHHHHHHHHHHHhhhhCceeeEEecC Confidence 999999765555433211110 0011111111 22456778899999999999999999999999999999999988 Q ss_pred ceeeeeecchhhhhhcccCcCCCCHHHHHHHHHHHHHhhCCeEEEEeeCCCCceEEEEeeCCcceEEEEcCCcceeeeee Q lcl|Aclame:pro 76 YGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVYIDDVGLLNSKTK 155 (429) Q Consensus 76 ~~~~~~~~~~~~~~l~~~PN~~~s~~~~~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~l~p~~v~~~~~~~~~~~~~~~ 155 (429) +++.....|+++++|+.+||++||+++||+.++.+++++||||+++.++ .|++.+|||++|+.|++..+.++. . T Consensus 87 ~g~~~~~~~~l~~lL~~~PN~~~t~~~f~~~l~~~lll~Gnayv~i~~~-~g~~~~L~~l~~~~v~v~~~~~g~-----~ 160 (432) T protein:vir:81 87 DGRKEAVNHPLYTLLLDGPNSTQTAFDFWQVVVTRLLLDGTAYVRKVVT-DGRIESLQYLANDRLTITTDPKGN-----T 160 (432) T ss_pred CcceecccchHHHHHHhcccccCCHHHHHHHHHHHHhhcCCeEEEEEec-CCcEEEEEEEcCCceEEEECCCCc-----E Confidence 8888888999999999999999999999999999999999999999886 599999999999999999876542 2 Q ss_pred EEEeecccCceEEEccceEEEeecCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHHccCCcceEEEeCCCCCHHHHH Q lcl|Aclame:pro 156 MWYVVNTGGQQRVLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGDLNEDAKK 235 (429) Q Consensus 156 ~~~~~~~~g~~~~~~~~evih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~~e~~~ 235 (429) .|+++..+|..+.|++++|+|||++ +.++.+|+||+.++...+..+.+++++..++|+||++|+|+++++..+++++++ T Consensus 161 ~y~~~~~~g~~~~~~~~~iih~r~~-~~dg~~G~spi~~~~~~i~~~~~~~~~~~~~f~ng~~~~gil~~~~~l~~e~~~ 239 (432) T protein:vir:81 161 AYRYRRTDGQMIDIPKQQIWKIMGY-SLDGENGLSAIRYGAQIFGTAIAAEAQAARAFRNGQLQSVYYQIDRFLTDDQYD 239 (432) T ss_pred EEEEEecCceEEEEccccEEEecCC-CCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhcCCCcceEEecCCCCCHHHHH Confidence 3445566788899999999999954 667799999999999999999999999999999999999999999999999988 Q ss_pred HHHHHHHHHhcccccccceeecCCCceeEecCCChhHHHHHHHHHHHHHHHHHHhcCChhhcCCccccc---cccHHHHH Q lcl|Aclame:pro 236 VFRENFESMSSGLQNSHRIALMPVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKAT---LNNIEQQQ 312 (429) Q Consensus 236 ~~~~~~~~~~~g~~~~~~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~fgvp~~~l~~~~~~~---~~n~~~~~ 312 (429) +++++| .|..|+|++++|++|++|++++++++|+|++|.+++++++||++|||||.+||..+.++ ++|.||+. T Consensus 240 ~~~~~~----~~~~nag~~~vl~~g~~~~~l~~~~~d~q~le~~~~~~~~Ia~~fgVPp~~lg~~~~~~~~~~sn~eq~~ 315 (432) T protein:vir:81 240 SFAKKV----SGSVEAGRAPLLEGGMDVKSLGLNPVDAQLLQSRQYSVESICRFFGVPPSMIGHSSAGTTSWGSGIESQQ 315 (432) T ss_pred HHHHHH----hhhhcCCCceecCCCceEEEccCCHHHHHHHHHHHHHHHHHHHHhCCCHHHcCCcCCccccccchHHHHH Confidence 877765 45678899999999999999999999999999999999999999999999999876654 48899999 Q ss_pred HHHHHHHHhHHHHHHHHHHHHhhccchhhcchhhhhhhhhhHhhhhHHHHHHHHHHHHhCCCCCHHHHHHHhCCCCCCCc Q lcl|Aclame:pro 313 QQFYTDTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEAGG 392 (429) Q Consensus 313 ~~~~~~~l~P~~~~i~~~l~~~ll~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~Gl~~~~~g 392 (429) +.|+++||.|+++.||++|+++|+++.+. .+++++||++.+++.|.+++++.+.+++++|++|+||+|+++|+||+||| T Consensus 316 ~~f~~~tl~P~~~~ie~~l~~kLl~~~~~-~~~~~~fd~~~llr~d~~~r~~~~~~~~~~G~~t~NE~R~~~glpp~~g~ 394 (432) T protein:vir:81 316 LGFLTMTLSPWLRRIEQSIALNLLSPAER-RRYFADFDTSALLRADSAARSSYYSQLVNNGLMTRDEAREIEGLPKLGGN 394 (432) T ss_pred HHHHHHHHHHHHHHHHHHHHhhccCcccc-CceEEEeechhhhccCHHHHHHHHHHHHhCCCCCHHHHHHHhCCCCCCCC Confidence 99999999999999999999999988774 57899999999999999999999999999999999999999999999976 Q ss_pred c-eeeeccccccccccccccCCCCCCCCCCCCCCCCCC Q lcl|Aclame:pro 393 D-RLLVNGNMLPIDMAGQAYLKGGDTNGEVSKEGNEGN 429 (429) Q Consensus 393 D-~~~~~~n~~~~~~~~~~~~~~g~~~~~~~~~~~~~n 429 (429) | .+++++|++|++..++...+. ...++++++.++.. T Consensus 395 ~~~~~~~~~~~pl~~~~~~~~~~-~~~~~~n~~~~~~~ 431 (432) T protein:vir:81 395 AAVLTVQSAMVPLDSIGLQASPE-PASGLGNQQQDKVS 431 (432) T ss_pred cceEeecCcccchhhhccCCCCC-CCCCCCCccccccc Confidence 5 456899999988765433221 11111111111111 No 22 >protein:vir:97060 Length: 432 # NCBI annotation: putative head portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:1653 # MgeName: OP1 # Cross-refs: genbank:acc:YP_453563;genbank:gi:84662598;genbank:GeneID:5142475 Probab=100.00 E-value=1.1e-96 Score=546.63 Aligned_cols=415 Identities=23% Similarity=0.343 Sum_probs=349.7 Q ss_pred Cchhhhhhccccccccccc----ccCCchHHHHHhh--cCCCCcceechhhhhccHHHHHHHHHHHHhhccCceEEEecC Q lcl|Aclame:pro 1 MDSVKKFFNFEKRQTSQVI----ELNKDDEKLLEWL--GISPSTISVKGKNALKVATVFACIKILSESVSKLPLKIYQED 74 (429) Q Consensus 1 Mg~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~--~~~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~ 74 (429) ||+|+++..++.+...... ..+.. ......+ ..+.++..|+.+.|+++++||+||++||++||++|+++|+++ T Consensus 7 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~v~~~~a~~~~aV~~~v~~Ia~~ia~lp~~~y~~~ 85 (432) T protein:vir:97 7 LGLLGQLKAMFVPPDPVDIGGGQTFTPV-NATARDLGIIISDTGAAVNADAIMRLDAVAACVKLVSQAVAAMPLMMYMRT 85 (432) T ss_pred CchhhhhHhhcCCccccccccccccccC-chhhhhhcccccccCcccchHhhhcchHHHHHHHHHHHhhccCceEEEEec Confidence 9999988776655432111 11111 1111222 245677889999999999999999999999999999999999 Q ss_pred CceeeeeecchhhhhhcccCcCCCCHHHHHHHHHHHHHhhCCeEEEEeeCCCCceEEEEeeCCcceEEEEcCCcceeeee Q lcl|Aclame:pro 75 EYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVYIDDVGLLNSKT 154 (429) Q Consensus 75 ~~~~~~~~~~~~~~~l~~~PN~~~s~~~~~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~l~p~~v~~~~~~~~~~~~~~ 154 (429) ++++.....|+++++|+.+||++||+++||+.++.+++++||||++++++ .|++.+||||+|+.|++..+.++. T Consensus 86 ~~g~~~~~~~pl~~lL~~~PN~~~t~~~f~~~l~~~lll~Gnay~~~~~~-~g~~~~L~~l~p~~v~v~~~~~g~----- 159 (432) T protein:vir:97 86 PDGRKEAVNHPLYTLLLDGPNSTQTAFDFWQVVVTRLLLDGTAYVRKVVT-DGRIESLQYLANDRLTITTDTKGN----- 159 (432) T ss_pred CCCcccccccHHHHHHHhcccccCCHHHHHHHHHHHHhhcCCeEEEEEec-CCcEEEEEEEcCcceEEEEcCCCc----- Confidence 88888888999999999999999999999999999999999999999997 599999999999999999876542 Q ss_pred eEEEeecccCceEEEccceEEEeecCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHHccCCcceEEEeCCCCCHHHH Q lcl|Aclame:pro 155 KMWYVVNTGGQQRVLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGDLNEDAK 234 (429) Q Consensus 155 ~~~~~~~~~g~~~~~~~~evih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~~e~~ 234 (429) ..|+++..+|..+.|++++|||+|++ +.++.+|+||+..+...+.++.+++++..++|+||++|+|++++++.++++++ T Consensus 160 ~~y~~~~~~g~~~~~~~~~iih~r~~-~~dg~~G~spi~~~~~~i~~~~a~~~~~~~~f~ng~~~~gil~~~~~l~~e~~ 238 (432) T protein:vir:97 160 TAYRYRRTDGQMIDIPRQQIWKIMGY-SLDGENGLSAIRYGAQIFGTAIAAEAQAARAFRNGQLQSVYYQIDRFLTDDQY 238 (432) T ss_pred EEEEEEecCceEEEEccccEEEecCc-CCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhccCCcceeEecCCCCCHHHH Confidence 23444566788889999999999964 56789999999999999999999999999999999999999999999999998 Q ss_pred HHHHHHHHHHhcccccccceeecCCCceeEecCCChhHHHHHHHHHHHHHHHHHHhcCChhhcCCccccc---cccHHHH Q lcl|Aclame:pro 235 KVFRENFESMSSGLQNSHRIALMPVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKAT---LNNIEQQ 311 (429) Q Consensus 235 ~~~~~~~~~~~~g~~~~~~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~fgvp~~~l~~~~~~~---~~n~~~~ 311 (429) ++++++| .|..|+|+++||++|++|+++++++.|+|++|.+++++++||++|||||.+||..+.++ ++|.+++ T Consensus 239 ~~~~~~~----~~~~nag~~~vl~~g~~~~~l~~~~~d~q~~e~~~~~~~~Ia~~fgVPp~~lg~~~~~t~~~~s~~e~~ 314 (432) T protein:vir:97 239 DSFSKKV----SGSVEAGRAPLLEGGMDVKSLGLNPVDAQLLQSRQYSVESICRFFGVPPSMIGHSSAGTTSWGSGIESQ 314 (432) T ss_pred HHHHHHH----hhhhcCCCceecCCCceEEEccCChhHHHHHHHHHHHHHHHHHHhCCCHHHcCCcCCcccccchhHHHH Confidence 8766655 56678899999999999999999999999999999999999999999999999766544 4889999 Q ss_pred HHHHHHHHHhHHHHHHHHHHHHhhccchhhcchhhhhhhhhhHhhhhHHHHHHHHHHHHhCCCCCHHHHHHHhCCCCCCC Q lcl|Aclame:pro 312 QQQFYTDTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEAG 391 (429) Q Consensus 312 ~~~~~~~~l~P~~~~i~~~l~~~ll~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~Gl~~~~~ 391 (429) .+.|+++||.|+++.||++|+++|+++.+. .+++++||++.+++.|.+++++.+.+++++|++|+||+|+++|+||++| T Consensus 315 ~~~f~~~tl~P~~~~ie~~ln~kLl~~~e~-~~~~~~fd~~~llr~d~~~r~~~~~~~~~~G~~T~NE~R~~~glpp~~g 393 (432) T protein:vir:97 315 QLGFLTMTLSPWLRRIEQSIALNLLTPAER-RRYFADFDTSALLRADSAARSSYYSQLVNNGLMTRDEAREIEGLPKLGG 393 (432) T ss_pred HHHHHHHHHHHHHHHHHHHHhhhccCcccc-CceEEEeechhhhccCHHHHHHHHHHHHhCCCCCHHHHHHHhCCCCCCC Confidence 999999999999999999999999998774 5789999999999999999999999999999999999999999999998 Q ss_pred ccee-eeccccccccccccccCCCCCCCCCCCCCCCCCC Q lcl|Aclame:pro 392 GDRL-LVNGNMLPIDMAGQAYLKGGDTNGEVSKEGNEGN 429 (429) Q Consensus 392 gD~~-~~~~n~~~~~~~~~~~~~~g~~~~~~~~~~~~~n 429 (429) +|.+ .++.|++|++..+.+..+.. ..++++.+.++.. T Consensus 394 ~~~~~~~~~~~~pl~~~~~~~~~~~-~~~~~~~~~~~~~ 431 (432) T protein:vir:97 394 NAAVLTVQSAMVPLDSIGLQASPEP-ASGLGNQQQDKVS 431 (432) T ss_pred CcceEeecccccchhhhcccCCCCC-CCCCCCccccccc Confidence 7655 58999999887654322111 1111111111111 No 23 >protein:vir:5737 Length: 419 # NCBI annotation: portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:122 # MgeName: PY54 # Cross-refs: genbank:acc:NP_892048;genbank:gi:33770511;goa:Q7Y412;interpro:IPR006427;interpro:IPR006944;uniprot:Q7Y412;genbank:GeneID:1732929;interpro:IPR010994 Probab=100.00 E-value=1.4e-96 Score=546.02 Aligned_cols=413 Identities=26% Similarity=0.387 Sum_probs=351.0 Q ss_pred CchhhhhhcccccccccccccCCchHHHHHh-hcCCCCcceechhhhhccHHHHHHHHHHHHhhccCceEEEecCCcee- Q lcl|Aclame:pro 1 MDSVKKFFNFEKRQTSQVIELNKDDEKLLEW-LGISPSTISVKGKNALKVATVFACIKILSESVSKLPLKIYQEDEYGI- 78 (429) Q Consensus 1 Mg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~~- 78 (429) |+|++.|++....... .+......+ .+.+.++..++.+.|+++++||+||++||++||++|+++++.++++. T Consensus 1 m~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~g~~v~~~~al~~~~v~~~i~~ia~~ia~lp~~~~~~~~~g~~ 74 (419) T protein:vir:57 1 MFIPQFWKGRPSENRV------NWQVVPGGMRSSSSQAGVIITPETALALSAVRACVTLLAESVAQLPCVLYRRTENGGR 74 (419) T ss_pred CcchhhhccCCccccc------cccccccccccccccCCceechHHhhccHHHHHHHHHHHHhhccCceEEEEEcCCCce Confidence 9999876552111111 111111111 23456677899999999999999999999999999999999887764 Q ss_pred eeeecchhhhhhcccCcCCCCHHHHHHHHHHHHHhhCCeEEEEeeCCCCceEEEEeeCCcceEEEEcCCcceeeeeeEEE Q lcl|Aclame:pro 79 QRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVYIDDVGLLNSKTKMWY 158 (429) Q Consensus 79 ~~~~~~~~~~~l~~~PN~~~s~~~~~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~l~p~~v~~~~~~~~~~~~~~~~~~ 158 (429) .....|+++++|+.+||++||+++||+.++.+++++||+|++++++..|++++|||++|++|++..+.++. .+| T Consensus 75 ~~~~~~~l~~lL~~~PN~~~t~~~f~~~~~~~l~l~Gna~~~i~r~~~G~~~~L~pl~~~~v~v~~~~~g~------~~y 148 (419) T protein:vir:57 75 EIAFDHPLHDLIRYQPNRKDTAFEYHEQTQGVLGLEGNSYSLIDRNGRGDITELIPINPHKVIVLKGPDGM------PYY 148 (419) T ss_pred eccccchHHHHHhhccccCCCHHHHHHHHHHHHhhcCCeEEEEEECCCCcEEEEEEEcCcceEEEECCCce------EEE Confidence 44568999999999999999999999999999999999999999999999999999999999998876532 234 Q ss_pred eecccCceEEEccceEEEeecCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHHccCCcceEEEeCC----CCCHHHH Q lcl|Aclame:pro 159 VVNTGGQQRVLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVG----DLNEDAK 234 (429) Q Consensus 159 ~~~~~g~~~~~~~~evih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~----~~~~e~~ 234 (429) .+...| ..++.++|+|++++ +.++.+|+||+..+...+....++++++.++|+||++|+|+++.+. ..++++. T Consensus 149 ~~~~~~--~~~~~~~vih~r~~-~~d~~~G~s~i~~~~~~i~~~~~~~~~~~~~f~ng~~p~gil~~~~~~~~~~~~e~~ 225 (419) T protein:vir:57 149 DIPSIG--EILPMRMVHHIKSF-SLDGYIGTSPIQTNPDVLGLGIAVEQHAAQVFARGTTMSGVIERPFEAKAIASQAAV 225 (419) T ss_pred EEcCCc--eEEchhhEEEecCc-CCCCcccccHHHHHHHHHHHHHHHHHHHHHHHHccCCccEEEEecCcCCcccCHHHH Confidence 444333 56899999999965 5677999999999999999999999999999999999999999864 4578999 Q ss_pred HHHHHHHHHHhcccccccceeecCCCceeEecCCChhHHHHHHHHHHHHHHHHHHhcCChhhcCCccccccccHHHHHHH Q lcl|Aclame:pro 235 KVFRENFESMSSGLQNSHRIALMPVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKATLNNIEQQQQQ 314 (429) Q Consensus 235 ~~~~~~~~~~~~g~~~~~~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~fgvp~~~l~~~~~~~~~n~~~~~~~ 314 (429) +++++.|.+.++|..|+|+++++++|++|++++++++|+||+|.+++.+++||++|||||.+|+..+.++++|.+++.+. T Consensus 226 ~~~~~~~~~~~~g~~nag~~~vl~~g~~~~~l~~~~~d~q~~e~~~~~~~~Ia~~fgVPp~~lg~~~~~t~sn~e~~~~~ 305 (419) T protein:vir:57 226 DAILAKWTERYGGVRNAFSVGMLQEGMTYKQLSQDNEKAQLLQSRQYTVNEVCRLYKVPPHMIQDLQKSTNNNIEHQGLQ 305 (419) T ss_pred HHHHHHHHHHhccccccccceecCCCceEEEcCCChhhHHHHHHHHHHHHHHHHHhCCCHHHhCCCCCCccccHHHHHHH Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred HHHHHHhHHHHHHHHHHHHhhccchhhcchhhhhhhhhhHhhhhHHHHHHHHHHHHhCCCCCHHHHHHHhCCCCCCCcce Q lcl|Aclame:pro 315 FYTDTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEAGGDR 394 (429) Q Consensus 315 ~~~~~l~P~~~~i~~~l~~~ll~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~Gl~~~~~gD~ 394 (429) |+++||.|+++.|+++|+++||++.+. .+++++||++.+++.|.+++++.+++++++|++|+||+|+++|+||+||||+ T Consensus 306 f~~~~l~P~~~~ie~~l~~~ll~~~~~-~~~~i~fd~~~ll~~d~~~~~~~~~~~~~~G~~T~NE~R~~~gl~p~~ggD~ 384 (419) T protein:vir:57 306 YVIYTMLAILKRHESAMMRDLLLPSER-RDFYIEFNVSSLLRGDQKSRYESYALGRQWGWLSVNDIRRMENLTPIPGGDK 384 (419) T ss_pred HHHHHHHHHHHHHHHHHHhhccCcccc-CCeEEEEechhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCcCe Confidence 999999999999999999999988765 6899999999999999999999999999999999999999999999999999 Q ss_pred eeeccccccccccccccCCCCCCCCCCCCCCCCCC Q lcl|Aclame:pro 395 LLVNGNMLPIDMAGQAYLKGGDTNGEVSKEGNEGN 429 (429) Q Consensus 395 ~~~~~n~~~~~~~~~~~~~~g~~~~~~~~~~~~~n 429 (429) +++|+|++++...........+...+.+...-..| T Consensus 385 ~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 419 (419) T protein:vir:57 385 YLTPLNMVDSKALTGIGKATPQQLKDIEAILCTRN 419 (419) T ss_pred eeeccccccccccccccCCCcccCcchhhhhhccC Confidence 99999998876544322111111111111111122 No 24 >protein:vir:4337 Length: 434 # NCBI annotation: portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:93 # MgeName: D3 # Cross-refs: genbank:acc:NP_061500;genbank:gi:9635589;genbank:GeneID:1262858 Probab=100.00 E-value=2.3e-96 Score=544.93 Aligned_cols=419 Identities=28% Similarity=0.403 Sum_probs=352.5 Q ss_pred Cch-hhhhhccccc-cccc-----ccccC-CchHHHHHhhcC-CCCcceechhhhhccHHHHHHHHHHHHhhccCceEEE Q lcl|Aclame:pro 1 MDS-VKKFFNFEKR-QTSQ-----VIELN-KDDEKLLEWLGI-SPSTISVKGKNALKVATVFACIKILSESVSKLPLKIY 71 (429) Q Consensus 1 Mg~-~~~~~~~~~~-~~~~-----~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~ 71 (429) |.= |.++....+. .++. ..+.+ .+...+..|+|. +.++..++.+.|+++++||+||++||++||++||++| T Consensus 1 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~v~~~~al~~~~V~~~i~~ia~~ia~lp~~~~ 80 (434) T protein:vir:43 1 MSKSLGKVLSSATSAPRSSLFGWGGKTIRLTDGAFWSQFLGRESSSGKKVTVDKAMKLSAVWACVRLISTSVAGLPLGVY 80 (434) T ss_pred CccchhhhhhhcccccchhhhcccccccccCchHHHHHHhcCCccCCceechhhhhccHHHHHHHHHHHHhhhhCceEEE Confidence 432 1222221111 1110 11122 233445556664 3467789999999999999999999999999999999 Q ss_pred ecCCcee-eeeecchhhhhhcccCcCCCCHHHHHHHHHHHHHhhCCeEEEEeeCCCCceEEEEeeCCcceEEEEcCCcce Q lcl|Aclame:pro 72 QEDEYGI-QRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVYIDDVGLL 150 (429) Q Consensus 72 ~~~~~~~-~~~~~~~~~~~l~~~PN~~~s~~~~~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~l~p~~v~~~~~~~~~~ 150 (429) +.++++. .....|+++++|+.+||++||+++||+.++.+++++||+|+++.++ .|++.+||||+|++|++..+.++. T Consensus 81 ~~~~~g~~~~~~~~~l~~lL~~~PN~~~t~~~f~~~~~~~lll~Gnay~~i~~~-~G~~~~L~~l~p~~v~~~~~~~g~- 158 (434) T protein:vir:43 81 ERKADGSRVDARSFPLYDVVHNSPNDDMTAFQFWQAMVASMLLWGNAYAEIRRA-AGRPAALDFLLPSRVDLECDENGR- 158 (434) T ss_pred EEcCCCccccccccHHHHHHhccCCCCCCHHHHHHHHHHHHhhcCCeEEEEEeC-CCcEEEEEEEcCcceEEEEcCCCe- Confidence 9886654 4557899999999999999999999999999999999999998776 799999999999999998876532 Q ss_pred eeeeeEEEeecccCceEEEccceEEEeecCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHHccCCcceEEEeCCCCC Q lcl|Aclame:pro 151 NSKTKMWYVVNTGGQQRVLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGDLN 230 (429) Q Consensus 151 ~~~~~~~~~~~~~g~~~~~~~~evih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~ 230 (429) ..|+.+..+|..+.|+++||||++++ +.++.+|+||+..+...+..+.+++++..++|+||++|+|++++++.++ T Consensus 159 ----~~y~~~~~~g~~~~~~~~eVih~~~~-~~dg~~G~spi~~~~~~i~~~~~~~~~~~~~f~ng~~~~gil~~~~~l~ 233 (434) T protein:vir:43 159 ----LKYFYTTKKGARREIERTNMLHIPAF-TLDGRIGLSAIRYGVDVFGSVMSAEDAANGTFKNGLLPTVAFKVDRILQ 233 (434) T ss_pred ----EEEEEEecCceEEEEccccEEEecCc-CCCCccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEecCCCCC Confidence 33556667888899999999999965 6778999999999999999999999999999999999999999999999 Q ss_pred HHHHHHHHHHHHHHhcccccccceeecCCCceeEecCCChhHHHHHHHHHHHHHHHHHHhcCChhhcCCcccc--ccccH Q lcl|Aclame:pro 231 EDAKKVFRENFESMSSGLQNSHRIALMPVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKA--TLNNI 308 (429) Q Consensus 231 ~e~~~~~~~~~~~~~~g~~~~~~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~fgvp~~~l~~~~~~--~~~n~ 308 (429) +++.+++++.|++ +.|..|+|+++|+++|++|+++++++.|+|++|.+++++++||++|||||.+||..+.+ +++|. T Consensus 234 ~e~~~~~r~~~~~-~~g~~nag~~~vl~~g~~~~~l~~~~~d~q~~e~~~~~~~~Ia~~fgVPp~~lg~~~~~~~~~s~~ 312 (434) T protein:vir:43 234 PAQREEFREYVKS-VSGAMNSGRSPVLEQGITPETIGINPVDAQLLETREHGVIEICRWFGVPPWMIGQTDKGSNWGTGL 312 (434) T ss_pred HHHHHHHHHHHHH-hcCccccCCccccCCCceEEEccCChhHHHHHHHHHHHHHHHHHHhCCCHHHhCCCcCCccccchH Confidence 9999999999975 56778999999999999999999999999999999999999999999999999876654 48999 Q ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHhhccchhhcchhhhhhhhhhHhhhhHHHHHHHHHHHHhCCCCCHHHHHHHhCCCC Q lcl|Aclame:pro 309 EQQQQQFYTDTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPP 388 (429) Q Consensus 309 ~~~~~~~~~~~l~P~~~~i~~~l~~~ll~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~Gl~~ 388 (429) +++...|+++||.|++.+||++||++|+++.+. .+++++||++.+++.|.+++++.+.+++++|++|+||+|+++|+|| T Consensus 313 e~~~~~f~~~~L~P~~~~ie~~ln~kL~~~~~~-~~~~~~fd~~~llr~d~~~r~~~~~~~~~~G~~T~NE~R~~~gl~p 391 (434) T protein:vir:43 313 EQQMLAFLTFSISSITNQIQQCVNKRLLTAPER-IRYYAEFSLEGFLKADSAGRAAWYSTMAQNGFMTRNEGRRKENLPE 391 (434) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcCChhhh-cCceEEEechhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCC Confidence 999999999999999999999999999998774 5689999999999999999999999999999999999999999999 Q ss_pred CCCcceeeeccccccccccccccCCCCCCCC---CCCCCCCCC Q lcl|Aclame:pro 389 EAGGDRLLVNGNMLPIDMAGQAYLKGGDTNG---EVSKEGNEG 428 (429) Q Consensus 389 ~~~gD~~~~~~n~~~~~~~~~~~~~~g~~~~---~~~~~~~~~ 428 (429) +||||++++|+|++|++..++.+........ +.++++-+- T Consensus 392 ~~ggD~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 434 (434) T protein:vir:43 392 LPGGDILTVQSNLVPIDQLGQSNKSQAVRAALMNWFSQPEPQE 434 (434) T ss_pred CCCCCeEeeccCccchhhhhccCCCcchhhhhhccCCCCCCCC Confidence 9999999999999999887765443321111 111111111 No 25 >protein:vir:1431 Length: 419 # NCBI annotation: putative portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:30 # MgeName: phiE125 # Cross-refs: genbank:acc:NP_536360;genbank:gi:17975165;genbank:GeneID:929165 Probab=100.00 E-value=2.1e-96 Score=545.17 Aligned_cols=408 Identities=26% Similarity=0.416 Sum_probs=350.1 Q ss_pred hhhcccccccccccccCCchHHHHHhhcC--CCCcceechhhhhccHHHHHHHHHHHHhhccCceEEEecCCceeeeeec Q lcl|Aclame:pro 6 KFFNFEKRQTSQVIELNKDDEKLLEWLGI--SPSTISVKGKNALKVATVFACIKILSESVSKLPLKIYQEDEYGIQRGTK 83 (429) Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~~~~~~~ 83 (429) =||+.......... .....+++..++|. +.+...++.+.|+++++||+||++||+.||++|+++++++++++....+ T Consensus 1 ~~~~r~~~~~~~~~-~~~~~~~~~~~~g~~~s~~~~~vt~~~al~~~~v~~~v~~ia~~iA~lp~~~~~~~~~~~~~~~~ 79 (419) T protein:vir:14 1 MFFSRQLLSNLGQT-QMSAGGWVSALLGSSRSDSGQVVTPASALALTVLQNCVTLLAESIAQLPIELYERSGEDRKPATD 79 (419) T ss_pred Cccccccccccccc-ccCcchhhHHhhcCCCccCCcccchHHhhccHHHHHHHHHHHHhhccCceEEEEecCCccccccc Confidence 12222111111111 22233455556654 4566789999999999999999999999999999999999888888889 Q ss_pred chhhhhhcccCcCCCCHHHHHHHHHHHHHhhCCeEEEEeeCCCCceEEEEeeCCcceEEEEcCCcceeeeeeEEEeeccc Q lcl|Aclame:pro 84 HYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVYIDDVGLLNSKTKMWYVVNTG 163 (429) Q Consensus 84 ~~~~~~l~~~PN~~~s~~~~~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~l~p~~v~~~~~~~~~~~~~~~~~~~~~~~ 163 (429) |+++++|+.+||++||+++||+.++.+++++||+|+++.++..|++.+|||++|+.|++..+.++.. +|.+... T Consensus 80 ~~l~~lL~~~PN~~~t~~~f~~~~~~~l~l~Gna~~~i~r~~~G~~~~l~pl~~~~v~v~~~~~~~~------~y~~~~~ 153 (419) T protein:vir:14 80 HPLYSILKYEPNSWQTPFEYQEQSQVAVGLRGNSYSFIDRDSDGVIQGLYPLDNEAVTVMRGSDLKP------VYRVRGS 153 (419) T ss_pred cHHHHHHHhhcccCCCHHHHHHHHHHHHhhcCCeEEEEEECCCCcEEEEEEecCceEEEEECCCceE------EEEEccC Confidence 9999999999999999999999999999999999999999999999999999999999988765422 2222221 Q ss_pred CceEEEccceEEEeecCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHHccCCcceEEEeCCCC----CHHHHHHHHH Q lcl|Aclame:pro 164 GQQRVLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGDL----NEDAKKVFRE 239 (429) Q Consensus 164 g~~~~~~~~evih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~----~~e~~~~~~~ 239 (429) ..++.++|+|++++ +.++.+|+||+..+...+....+++++..++|+||++|+|+++.++.+ ++++.+++++ T Consensus 154 ---~~~~~~~i~h~~~~-~~dg~~G~s~i~~~~~~i~~~~~~~~~~~~~f~ng~~p~gil~~~~~~~~~~~~~~~~~~~~ 229 (419) T protein:vir:14 154 ---DPMPQRLVHHVRWM-SINGYTGLSPVLLHANAIGHAQAIQQYAGKSFMNGTALSGVIERPKDAPALKDQASVDRITD 229 (419) T ss_pred ---cccchhheeEecCc-CCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhccCCccEEEEecCCCCcccCHHHHHHHHH Confidence 23789999999965 567899999999999999999999999999999999999999998766 4889999999 Q ss_pred HHHHHhcccccccceeecCCCceeEecCCChhHHHHHHHHHHHHHHHHHHhcCChhhcCCccccccccHHHHHHHHHHHH Q lcl|Aclame:pro 240 NFESMSSGLQNSHRIALMPVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKATLNNIEQQQQQFYTDT 319 (429) Q Consensus 240 ~~~~~~~g~~~~~~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~fgvp~~~l~~~~~~~~~n~~~~~~~~~~~~ 319 (429) .|++.++|..|+|+++++++|++|+++++++.|+|++|.+++++++||++|||||.+|+..+.++++|.|++.+.|+++| T Consensus 230 ~~~~~~~g~~nag~~~vl~~g~~~~~l~~~~~d~q~~e~~~~~~~~Ia~~fgVpp~~lg~~~~~t~s~~E~~~~~f~~~~ 309 (419) T protein:vir:14 230 GWNAKFGGSGNAKKVALLQEGMTFRPLSMTNVDAALIDALRLSALDIARIYKIPAHMVNELERATFSNIEHQSLQFVIYT 309 (419) T ss_pred HHHHHhcCccccCCceecCCCceEEEccCChhhHHHHHHHHHHHHHHHHHhCCCHHHhcCCCCCCcccHHHHHHHHHHHH Confidence 99999999999999999999999999999999999999999999999999999999999988899999999999999999 Q ss_pred HhHHHHHHHHHHHHhhccchhhcchhhhhhhhhhHhhhhHHHHHHHHHHHHhCCCCCHHHHHHHhCCCCCCCcceeeecc Q lcl|Aclame:pro 320 LQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEAGGDRLLVNG 399 (429) Q Consensus 320 l~P~~~~i~~~l~~~ll~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~Gl~~~~~gD~~~~~~ 399 (429) |.|++++|+++|+++||++.+. .+++++||++++++.|.+++++.+.+++++|++|+||+|+++|+||+||||++++|+ T Consensus 310 L~P~~~~ie~~l~~kll~~~~~-~~~~i~fd~~~l~r~d~~~~~~~~~~~~~~G~~T~NE~R~~~gl~p~~gGD~~~~~~ 388 (419) T protein:vir:14 310 LLPWVKRHEQAKTRDLLLPSER-KQYFIEYNLAGLLRGDQSSRYAAYAVGRQWGWLSINDIRRLENMPPVKGGDIYLSPM 388 (419) T ss_pred HHHHHHHHHHHHhhhccCcccc-CCeEEEEechhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCcCeeeecc Confidence 9999999999999999988775 678999999999999999999999999999999999999999999999999999999 Q ss_pred ccccccccccccCCCCCCCCCCCCCCCCCC Q lcl|Aclame:pro 400 NMLPIDMAGQAYLKGGDTNGEVSKEGNEGN 429 (429) Q Consensus 400 n~~~~~~~~~~~~~~g~~~~~~~~~~~~~n 429 (429) |+++++.+++.+. ...++.+.+.+.+ T Consensus 389 n~~~~~~~~~~~~----~~~~~~~~~~~e~ 414 (419) T protein:vir:14 389 NMVDASKPQQLPV----GKSEPTKAAIDEI 414 (419) T ss_pred ccccccccccccC----CCCCCccccccch Confidence 9988775542211 1122222222222 No 26 >protein:vir:2683 Length: 412 # NCBI annotation: portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:57 # MgeName: phiSLT # Cross-refs: genbank:acc:NP_075502;genbank:gi:12719431;genbank:GeneID:920150 Probab=100.00 E-value=1e-95 Score=541.33 Aligned_cols=406 Identities=25% Similarity=0.412 Sum_probs=349.0 Q ss_pred Cchhhh--hhcccccccc-cc-cccCCchHHHHHhhcCCCCcceechhhhhccHHHHHHHHHHHHhhccCceEEEecCCc Q lcl|Aclame:pro 1 MDSVKK--FFNFEKRQTS-QV-IELNKDDEKLLEWLGISPSTISVKGKNALKVATVFACIKILSESVSKLPLKIYQEDEY 76 (429) Q Consensus 1 Mg~~~~--~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~ 76 (429) |++|.+ ++...++... .. .........+..|.+ .+...++.+.|+++|+|++||++||++||++||++++.++. T Consensus 1 m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~v~~~~a~~~~~v~~~i~~ia~~iA~lp~~~~~~~~~ 78 (412) T protein:vir:26 1 MNVIAKENIVTRIKKKLIDNWIDQSTSKLYDFSPWKN--RSFWGVINNTLETNETIFSAITKLSNSMASLPLKMYEDYKV 78 (412) T ss_pred CccchhhhhhhhhhhhHhhhhhcccccccccccccCC--ccccccchhhhhccHHHHHHHHHHHHhHhhCceeEeecccc Confidence 999944 4432221100 00 000001111222222 35566788999999999999999999999999999987653 Q ss_pred eeeeeecchhhhhhcccCcCCCCHHHHHHHHHHHHHhhCCeEEEEeeCCCCceEEEEeeCCcceEEEEcCCcceeeeeeE Q lcl|Aclame:pro 77 GIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVYIDDVGLLNSKTKM 156 (429) Q Consensus 77 ~~~~~~~~~~~~~l~~~PN~~~s~~~~~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~l~p~~v~~~~~~~~~~~~~~~~ 156 (429) ..|+++++|+.+||++||+++||+.++.+|+++||+|++++|+..|++.+|+|++|+.|++..+.+. .... T Consensus 79 -----~~~~~~~lL~~~PN~~~t~~~f~~~~~~~lll~Gnay~~i~r~~~G~~~~L~~l~~~~v~v~~~~~~----~~~~ 149 (412) T protein:vir:26 79 -----VNTEVSDLLTVSPNNSLSSFDFINQIETIRNEKGNAYVLIERDIYHQPSKLFLLNPDVVEMLIENQS----RELY 149 (412) T ss_pred -----ccchHHHHHHhhcccCCCHHHHHHHHHHHHhhcCceEEEEEECCCCcEEEEEEEcCceeEEEEeCCC----cEEE Confidence 3589999999999999999999999999999999999999999999999999999999999887653 2333 Q ss_pred EEeecccCceEEEccceEEEeecCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHHccCCcceEEEeCCCCCHHHHHH Q lcl|Aclame:pro 157 WYVVNTGGQQRVLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGDLNEDAKKV 236 (429) Q Consensus 157 ~~~~~~~g~~~~~~~~evih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~~e~~~~ 236 (429) |.+...+|....|+++|||||+++++.++.+|+||+.++...+.++.++.++. ++.++..++++++.+..+++++.++ T Consensus 150 y~~~~~~g~~~~~~~~evih~~~~~~~~~~~G~s~i~~~~~~i~~~~a~~~~~--~~~~~~~~~~i~~~~~~l~~e~~~~ 227 (412) T protein:vir:26 150 YSIHAATGNKLIVHNMDMLHFKHIVASNMVQGISPIDVLKNTTDFDNAVRTFN--LTEMQKPDSFMLKYGSNVGKEKRQQ 227 (412) T ss_pred EEEEcCCceEEEEccccEEEeCCCCCCCCcccccHHHHHHHHHHHHHHHHHHH--HHhcCCCCceEEecCCCCCHHHHHH Confidence 45556677888999999999998888999999999999999999999998884 5566667788889999999999999 Q ss_pred HHHHHHHHhcccccccceeecCCCceeEecCCChhHHHHHHHHHHHHHHHHHHhcCChhhcCCccccccccHHHHHHHHH Q lcl|Aclame:pro 237 FRENFESMSSGLQNSHRIALMPVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKATLNNIEQQQQQFY 316 (429) Q Consensus 237 ~~~~~~~~~~g~~~~~~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~fgvp~~~l~~~~~~~~~n~~~~~~~~~ 316 (429) ++++|++.++ ++|+++++++|++|++++++++|+|++|.+++++++||++|||||.+|++.+.++++|.+++.+.|+ T Consensus 228 ~~~~~~~~~~---~~g~~~vl~~g~~~~~l~~~~~d~q~~e~~~~~~~~Ia~afgVPp~~lg~~~~~~~sn~e~~~~~f~ 304 (412) T protein:vir:26 228 VLEDFKQYYE---ENGGILFQEPGVEIEPLPKKYVSEDIVASENLTRERVANVFQLPSVFLNARSNTNFAKNEELNRFYL 304 (412) T ss_pred HHHHHHHHhh---cCCCeeecCCCceEEEcCCChhHHHHHHHHHHHHHHHHHHhCCCHHHhCCCCCCCcccHHHHHHHHH Confidence 9999998775 5678999999999999999999999999999999999999999999999988899999999999999 Q ss_pred HHHHhHHHHHHHHHHHHhhccchhhcchhhhhhhhhhHhhhhHHHHHHHHHHHHhCCCCCHHHHHHHhCCCCCCCcceee Q lcl|Aclame:pro 317 TDTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEAGGDRLL 396 (429) Q Consensus 317 ~~~l~P~~~~i~~~l~~~ll~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~Gl~~~~~gD~~~ 396 (429) ++||.|++.+|+++|+++||+..+...+++++||++++++.|.+++++.+++++++|++|+||+|+++|+||+||||+++ T Consensus 305 ~~~l~P~~~~ie~~ln~kLl~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~G~~t~NE~R~~~gl~p~~ggD~~~ 384 (412) T protein:vir:26 305 QHTLLPIVKQYEEEFNRKLLTKTDREKNRYFKFNVKSYLRADSATQAEVYFKAVRSGYYTINDIREWEDLPPVEGGDKPL 384 (412) T ss_pred HHHHHHHHHHHHHHHHhhcCCcccccCcceEEeechhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCcCeee Confidence 99999999999999999999999988899999999999999999999999999999999999999999999999999999 Q ss_pred eccccccccccccc--cCCCCCCCCCCC Q lcl|Aclame:pro 397 VNGNMLPIDMAGQA--YLKGGDTNGEVS 422 (429) Q Consensus 397 ~~~n~~~~~~~~~~--~~~~g~~~~~~~ 422 (429) +++|++|++...+. ..+||+++.++. T Consensus 385 ~~~n~~~~~~~~~~~~~~~gG~~n~~e~ 412 (412) T protein:vir:26 385 ISGDLYPIDTPLELRKSLKGGDKNVNES 412 (412) T ss_pred ecccccccccchhhcccccCCCCCcCCC Confidence 99999999876543 456666655544 No 27 >protein:vir:8418 Length: 409 # NCBI annotation: gp13 # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:155 # MgeName: Omega # Cross-refs: genbank:acc:NP_818314;genbank:gi:29566750;genbank:GeneID:1260067 Probab=100.00 E-value=3.3e-95 Score=538.56 Aligned_cols=405 Identities=23% Similarity=0.332 Sum_probs=343.2 Q ss_pred CchhhhhhcccccccccccccCCchHHHHHhhcCCCCcceechhhhhccHHHHHHHHHHHHhhccCceEEEecCCceeee Q lcl|Aclame:pro 1 MDSVKKFFNFEKRQTSQVIELNKDDEKLLEWLGISPSTISVKGKNALKVATVFACIKILSESVSKLPLKIYQEDEYGIQR 80 (429) Q Consensus 1 Mg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~~~~ 80 (429) ||||+|+|+.....+......... ......+.....++.+.|+++++|++||++||++||++||++++.+++++ T Consensus 1 Mgl~~~~f~~~~~~~~~~~~~~~~----~~~~~~~~~g~~v~~~~al~~~~v~~~v~~ia~~iA~lp~~~~~~~~~~~-- 74 (409) T protein:vir:84 1 MSLFTRIFSGPSEERTLTKISGIP----SPAEDWAMHGDRPGANSAMTLGAFYACVTLLADTVASLSIDAYRKKDNVR-- 74 (409) T ss_pred CchhhhhhcCCCcccccccccccc----cccchhhccCcccchhhhhccHHHHHHHHHHHHhhhhCceEEEEecCCcc-- Confidence 999999987543332221111111 01111223445678889999999999999999999999999999876654 Q ss_pred eecchhhhhhcccCcCCCCHHHHHHHHHHHHHhhCCeEEEEe-eCCCCceEEEEeeCCcceEEEEcCCcceeeeeeEEEe Q lcl|Aclame:pro 81 GTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIE-FDRKGKVQALWPIDASKVTVYIDDVGLLNSKTKMWYV 159 (429) Q Consensus 81 ~~~~~~~~~l~~~PN~~~s~~~~~~~~~~~~l~~G~~~~~~~-~~~~g~~~~l~~l~p~~v~~~~~~~~~~~~~~~~~~~ 159 (429) ...|+++++|+.+||++||+++||+.++.+++++||+|+++. ++..|++.+|||++|++|++....+.. ....++. T Consensus 75 ~~~~~l~~lL~~~PN~~~t~~~f~~~l~~~l~l~Gn~~~~i~~~~~~g~~~~L~~l~p~~v~v~~~~~~~---~~~~~~~ 151 (409) T protein:vir:84 75 IPVSPAPKLLESTPYPGLTWFDWLWMLMESLAVTGNAFGYISARDEANRPTAIMPIHPDCIHVTDAKDED---GDWIEPV 151 (409) T ss_pred cccchHHHHhhccCCCCCCHHHHHHHHHHHHhhcCCeEEEEEEECCCCceEEEEEEcCceeEEEEcCCCc---ceEEEEE Confidence 446999999999999999999999999999999999999875 678899999999999999987655432 1223334 Q ss_pred ecccCceEEEccceEEEeecCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHHccCCcceEEEeCCCCCHHHHHHHHH Q lcl|Aclame:pro 160 VNTGGQQRVLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGDLNEDAKKVFRE 239 (429) Q Consensus 160 ~~~~g~~~~~~~~evih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~~e~~~~~~~ 239 (429) +..+| +.|+++||||++++++.+..+|+||+.++...+..+.++.+++.++|+||++|+|+++++..+++|+.+++++ T Consensus 152 ~~~~g--~~~~~~dvih~~~~~~~~~~~G~s~i~~~~~~i~~~~~~~~~~~~~f~ng~~p~gil~~~~~l~~e~~~~~~~ 229 (409) T protein:vir:84 152 YRIDG--KVVPNHRIMHIKRYPVAGCALGMSPIEKAASAIGLGLAAERYGLRWFRDSANPSGILSSDADLTPDQVKQTQK 229 (409) T ss_pred ecCCc--eEEchhhEEEecCCCCCcccccccHHHHHHHHHHHHHHHHHHHHHHHhcCCCccEEEecCCCCCHHHHHHHHH Confidence 44555 5689999999998888888899999999999999999999999999999999999999999999999999999 Q ss_pred HHHHHhcccccccceeecCCCceeEecCCChhHHHHHHHHHHHHHHHHHHhcCChhhcCCccccc--cccHHHHHHHHHH Q lcl|Aclame:pro 240 NFESMSSGLQNSHRIALMPVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKAT--LNNIEQQQQQFYT 317 (429) Q Consensus 240 ~~~~~~~g~~~~~~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~fgvp~~~l~~~~~~~--~~n~~~~~~~~~~ 317 (429) .|.+.+. |+|+++|+++|++|+++++++.|+|++|.+++++++||++|||||.+||..+.++ ++|.+++...|++ T Consensus 230 ~~~~~~~---n~g~~~vl~~g~~~~~~~~~~~d~q~~e~~~~~~~~Ia~~fgVPp~~lg~~~~~~~~~sn~e~~~~~f~~ 306 (409) T protein:vir:84 230 QWIQSHH---NRRLPAVMSAGIKWQSVSITPNESQFLETRSFQRSEIAMWFRIPPHMIGDVEKSTSWGTGIEEQGINFVR 306 (409) T ss_pred HHHHHhc---cCCCeeecCCCceEEEccCChhHHHHHHHHHHHHHHHHHHhCCCHHHhCCCCCcccccchHHHHHHHHHH Confidence 9988764 6789999999999999999999999999999999999999999999999766654 5889999999999 Q ss_pred HHHhHHHHHHHHHHHHhhccchhhcchhhhhhhhhhHhhhhHHHHHHHHHHHHhCCCCCHHHHHHHhCCCCCCCcceeee Q lcl|Aclame:pro 318 DTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEAGGDRLLV 397 (429) Q Consensus 318 ~~l~P~~~~i~~~l~~~ll~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~Gl~~~~~gD~~~~ 397 (429) +||.|+++.||++|+++|. .+++++||++.+++.|.+++++++.+++++|++|+||+|+++|+||+||||++++ T Consensus 307 ~~l~P~~~~ie~~l~~~L~------~g~~i~fd~~~l~~~d~~~~~~~~~~~~~~G~~t~NE~R~~~g~~p~~ggD~~~~ 380 (409) T protein:vir:84 307 HTLLPWLRCIEQALDTFLP------RGQFVKFNVDGLMRGDVTARFTAYQMGLQNGIWSVNEVRAWEDAPPIPEGDIHLQ 380 (409) T ss_pred HHHHHHHHHHHHHHHHhcc------CCCeEEEechhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCcceeee Confidence 9999999999999999862 4678999999999999999999999999999999999999999999999999999 Q ss_pred ccccccccccccccCCCCCCCCCCCCCCCCCC Q lcl|Aclame:pro 398 NGNMLPIDMAGQAYLKGGDTNGEVSKEGNEGN 429 (429) Q Consensus 398 ~~n~~~~~~~~~~~~~~g~~~~~~~~~~~~~n 429 (429) |+|++|++..+..+.. ....++.+++|| T Consensus 381 ~~n~~~~~~~~~~~~~----~~~~~~~~~~gn 408 (409) T protein:vir:84 381 PMNFVPLGYVPPEEPA----QEPQPNSATEGN 408 (409) T ss_pred cccccccccCCccccC----cCCCCCCccCCC Confidence 9999999865443322 222344445555 No 28 >protein:vir:80333 Length: 419 # NCBI annotation: gp4, phage portal protein, HK97 family # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:1881 # MgeName: phi644-2 # Cross-refs: genbank:acc:YP_001111083;genbank:gi:134288632;genbank:GeneID:4960580 Probab=100.00 E-value=1.4e-95 Score=540.63 Aligned_cols=409 Identities=26% Similarity=0.426 Sum_probs=349.7 Q ss_pred CchhhhhhcccccccccccccCCchHHHHHhhcC--CCCcceechhhhhccHHHHHHHHHHHHhhccCceEEEecCCcee Q lcl|Aclame:pro 1 MDSVKKFFNFEKRQTSQVIELNKDDEKLLEWLGI--SPSTISVKGKNALKVATVFACIKILSESVSKLPLKIYQEDEYGI 78 (429) Q Consensus 1 Mg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~~ 78 (429) |-+-++ ..+...... +....++..++|. +.+...|+.+.|+++++||+||++||++||++|+++++++++++ T Consensus 1 m~~~~~----~~~~~~~~~--~~~~~~~~~~~g~~~s~~~~~v~~~~al~~~~v~~cv~~ia~~ia~lp~~~~~~~~~~~ 74 (419) T protein:vir:80 1 MFFSRQ----LLSNLGQTQ--PGSGGWVSALLGSARSEAGQVVTPASALSLTVLQNCVTLLAESIAQLPVELYERSGDDR 74 (419) T ss_pred CCcccc----cccccCcCC--CCcchhhHHhhcccccccCcccChHHhhccHHHHHHHHHHHHhhccCceEEEEecCCCc Confidence 543322 112222221 2234455566653 45567899999999999999999999999999999999999888 Q ss_pred eeeecchhhhhhcccCcCCCCHHHHHHHHHHHHHhhCCeEEEEeeCCCCceEEEEeeCCcceEEEEcCCcceeeeeeEEE Q lcl|Aclame:pro 79 QRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVYIDDVGLLNSKTKMWY 158 (429) Q Consensus 79 ~~~~~~~~~~~l~~~PN~~~s~~~~~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~l~p~~v~~~~~~~~~~~~~~~~~~ 158 (429) ....+|+++++|+.+||++||+++||+.++.+++++||+|++++|+..|++.+|||++|++|++..+.++.. .| T Consensus 75 ~~~~~~~l~~lL~~~PN~~~t~~~f~~~~~~~l~l~Gna~~~i~r~~~G~~~~L~~i~~~~v~i~~~~~~~~------~y 148 (419) T protein:vir:80 75 KPATDHPLYSILKYEPNPWQTPFEYQEQSQVAVGLRGNSYSFIDRDQDGVIQGLYPLDNEAVTVMKGPDLKP------MY 148 (419) T ss_pred ccccccHHHHHHHhhcccCCCHHHHHHHHHHHHhhcCCeEEEEEECCCCcEEEEEEecCceEEEEECCCceE------EE Confidence 888899999999999999999999999999999999999999999999999999999999999988765322 22 Q ss_pred eecccCceEEEccceEEEeecCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHHccCCcceEEEeCCCC----CHHHH Q lcl|Aclame:pro 159 VVNTGGQQRVLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGDL----NEDAK 234 (429) Q Consensus 159 ~~~~~g~~~~~~~~evih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~----~~e~~ 234 (429) .+. | ...+++++|+|++++ +.++++|+||+.++...+....+++++..++|+||++|+|+++++... ++++. T Consensus 149 ~~~--~-~~~~~~~~i~h~~~~-~~d~~~G~s~i~~~~~~i~~~~~~~~~~~~~f~ng~~~~gil~~~~~~~~~~~~~~~ 224 (419) T protein:vir:80 149 RVA--G-ADPLPQRLVHHVRWM-SINGYTGLSPVLLHANAIGHAQAIQQYAGKSFMNGTALSGVIERPTDAPALKDQASV 224 (419) T ss_pred EEc--C-ccccchhheEEecCC-CCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhcCCCccEEEEecCCCCcccCHHHH Confidence 222 2 134899999999964 567899999999999999999999999999999999999999987544 68899 Q ss_pred HHHHHHHHHHhcccccccceeecCCCceeEecCCChhHHHHHHHHHHHHHHHHHHhcCChhhcCCccccccccHHHHHHH Q lcl|Aclame:pro 235 KVFRENFESMSSGLQNSHRIALMPVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKATLNNIEQQQQQ 314 (429) Q Consensus 235 ~~~~~~~~~~~~g~~~~~~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~fgvp~~~l~~~~~~~~~n~~~~~~~ 314 (429) +++++.|++.++|..|+|+++++++|++|+++++++.|+|++|.+++++++||++|||||.+||..+.++++|.+++.+. T Consensus 225 ~~~~~~~~~~~~g~~n~g~~~vl~~g~~~~~l~~s~~d~q~~e~~~~~~~~Ia~~fgVPp~llg~~~~~t~~n~e~~~~~ 304 (419) T protein:vir:80 225 DRITDGWNAKFGGSGNAKKVALLQEGMKFKPLSMTNVDAALIDALRLSALDIARIYKIPAHMVNELERATFSNIEHQSLQ 304 (419) T ss_pred HHHHHHHHHHhcCccccCCceecCCCceEEeccCChhhHHHHHHHHHHHHHHHHHhCCCHHHhcCCCCCCcccHHHHHHH Confidence 99999999999999999999999999999999999999999999999999999999999999999889999999999999 Q ss_pred HHHHHHhHHHHHHHHHHHHhhccchhhcchhhhhhhhhhHhhhhHHHHHHHHHHHHhCCCCCHHHHHHHhCCCCCCCcce Q lcl|Aclame:pro 315 FYTDTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEAGGDR 394 (429) Q Consensus 315 ~~~~~l~P~~~~i~~~l~~~ll~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~Gl~~~~~gD~ 394 (429) |+++||.|+++.|+++|++++|++.+. .+++++||++.+++.|.+++++.+++++++|++|+||+|+++|+||+||||+ T Consensus 305 f~~~~l~P~~~~ie~~l~~kll~~~~~-~~~~i~fd~~~l~~~d~~~~~~~~~~~~~~G~~T~NE~R~~~g~~p~~gGD~ 383 (419) T protein:vir:80 305 FVIYTLLPWVKRHEQAKTRDLLLPSER-KQYFIEYNLAGLLRGDQSSRYAAYAVGRQWGWLSINDIRRLENMPPVKGGDI 383 (419) T ss_pred HHHHHHHHHHHHHHHHHhhhccCcccc-CCeEEEEechhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCcce Confidence 999999999999999999999988764 5789999999999999999999999999999999999999999999999999 Q ss_pred eeeccccccccccccccCCCCCCCCCCCCCCCCCC Q lcl|Aclame:pro 395 LLVNGNMLPIDMAGQAYLKGGDTNGEVSKEGNEGN 429 (429) Q Consensus 395 ~~~~~n~~~~~~~~~~~~~~g~~~~~~~~~~~~~n 429 (429) +++|+|+++++.+.. .++|+.+..++ .-++-+ T Consensus 384 ~~~~~n~~~~~~~~~--~~~~~~~~~~~-~~~~~~ 415 (419) T protein:vir:80 384 YLSPMNMVDASKPQP--IPMGKTEPTKA-ALDEIG 415 (419) T ss_pred eeecccccccccccc--ccCCCCCchhh-hHHHHH Confidence 999999987765432 12222222111 111111 No 29 >protein:vir:96980 Length: 409 # NCBI annotation: ORF008 # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:1643 # MgeName: 42e # Cross-refs: genbank:acc:YP_239857;genbank:gi:66395516;genbank:GeneID:5133013 Probab=100.00 E-value=6.4e-95 Score=536.99 Aligned_cols=403 Identities=25% Similarity=0.400 Sum_probs=349.0 Q ss_pred Cchhhhhhcccc-cccccccccCCchHHHHHhhcCCCCcceechhhhhccHHHHHHHHHHHHhhccCceEEEecCCceee Q lcl|Aclame:pro 1 MDSVKKFFNFEK-RQTSQVIELNKDDEKLLEWLGISPSTISVKGKNALKVATVFACIKILSESVSKLPLKIYQEDEYGIQ 79 (429) Q Consensus 1 Mg~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~~~ 79 (429) |+|+.|+++... +....+.+.. ..+..|.+ .+...++.+.|+++++|++||++||++||++|+++++.++. T Consensus 4 ~~~~~~~k~~~~~~~~~~~~~~~---~~~~~~~~--~~~~~v~~~~a~~~~~V~~ci~~ia~~ia~lp~~~~~~~~~--- 75 (409) T protein:vir:96 4 ENIVTRIKKKLIDNWIDQSASKL---YDFSPWKN--KSFWGVINNTLETNETIFSAITKLSNSMASLPLKMYEDYKV--- 75 (409) T ss_pred ccchhhhhhHHhhhhhccccccc---cccccccC--ccccccchhhHhhhHHHHHHHHHHHHhhhhCceEEeecccc--- Confidence 788887765422 2222222111 11222333 34456788899999999999999999999999999986543 Q ss_pred eeecchhhhhhcccCcCCCCHHHHHHHHHHHHHhhCCeEEEEeeCCCCceEEEEeeCCcceEEEEcCCcceeeeeeEEEe Q lcl|Aclame:pro 80 RGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVYIDDVGLLNSKTKMWYV 159 (429) Q Consensus 80 ~~~~~~~~~~l~~~PN~~~s~~~~~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~l~p~~v~~~~~~~~~~~~~~~~~~~ 159 (429) ..|+++++|+.+||++||+++||+.++.+++++||+|++++|+..|++.+|||++|+.|++..+++.. ...|.+ T Consensus 76 --~~~~l~~lL~~~PN~~~t~~~f~~~~~~~lll~Gnay~~i~r~~~G~~~~L~~l~~~~v~v~~~~~~~----~~~y~~ 149 (409) T protein:vir:96 76 --VNTEVSDLLTVSPNNSLSSFDFINQIETIRNEKGNAYVLIERDIYHQPSKLFLLNPDVVEMLIENQSR----ELYYSI 149 (409) T ss_pred --cchhHHHHHhhhcccCCCHHHHHHHHHHHHhhcCceEEEEEECCCCcEEEEEEEcCceeEEEEeCCCc----EEEEEE Confidence 35899999999999999999999999999999999999999999999999999999999998876432 233445 Q ss_pred ecccCceEEEccceEEEeecCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHHccCCcceEEEeCCCCCHHHHHHHHH Q lcl|Aclame:pro 160 VNTGGQQRVLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGDLNEDAKKVFRE 239 (429) Q Consensus 160 ~~~~g~~~~~~~~evih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~~e~~~~~~~ 239 (429) ...+|..+.|+++|||||+++++.++.+|+||+.++...+.++.+++++. ++.++..++++++.+..+++++.+++++ T Consensus 150 ~~~~g~~~~~~~~evih~r~~~~~~~~~G~s~l~~~~~~i~~~~~~~~~~--~~~~~~~~~~i~~~~~~l~~e~~~~~~~ 227 (409) T protein:vir:96 150 HAATGNKLIVHNMDMLHFKHIVASNMVQGISPIDVLKNTTDFDNAVRTFN--LTEMQKPDSFMLKYGSNVSTEKRQQVLE 227 (409) T ss_pred EcCCceEEEEccccEEEeCCCCCCCccccccHHHHHHHHHHHHHHHHHHH--HHhcCCCceeEEecCCCCCHHHHHHHHH Confidence 56678888999999999998888999999999999999999999988874 4455556677888899999999999999 Q ss_pred HHHHHhcccccccceeecCCCceeEecCCChhHHHHHHHHHHHHHHHHHHhcCChhhcCCccccccccHHHHHHHHHHHH Q lcl|Aclame:pro 240 NFESMSSGLQNSHRIALMPVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKATLNNIEQQQQQFYTDT 319 (429) Q Consensus 240 ~~~~~~~g~~~~~~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~fgvp~~~l~~~~~~~~~n~~~~~~~~~~~~ 319 (429) +|++.++ ++|+++++++|++|++++++++|+|++|.+++++++||++|||||.+||+.+.++++|.+++.+.|+++| T Consensus 228 ~~~~~~~---n~g~~~vl~~g~~~~~l~~~~~d~q~~e~~~~~~~~Ia~~fgVPp~~lg~~~~~~~s~~e~~~~~f~~~~ 304 (409) T protein:vir:96 228 DFKQYYE---ENGGILFQEPGVEIEPLPKKYVSEDIVASENLTRERVANVFQLPSIFLNARSNTNFAKNEELNRFYLQHT 304 (409) T ss_pred HHHHHhh---cCCCeeecCCCceEEEcCCChhHHHHHHHHHHHHHHHHHHhCCCHHHhCCCCCCCcccHHHHHHHHHHHH Confidence 9999875 5688999999999999999999999999999999999999999999999988899999999999999999 Q ss_pred HhHHHHHHHHHHHHhhccchhhcchhhhhhhhhhHhhhhHHHHHHHHHHHHhCCCCCHHHHHHHhCCCCCCCcceeeecc Q lcl|Aclame:pro 320 LQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEAGGDRLLVNG 399 (429) Q Consensus 320 l~P~~~~i~~~l~~~ll~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~Gl~~~~~gD~~~~~~ 399 (429) |.|+++.|+++|+++||++.+...+++++||++.+++.|.+++++.+.+++++|++|+||+|+++|+||+||||++++++ T Consensus 305 l~P~~~~ie~~l~~~Ll~~~~~~~g~~i~fd~~~ll~~d~~~~~e~~~~~~~~G~~T~NE~R~~~g~~pi~ggD~~~~~~ 384 (409) T protein:vir:96 305 LLPIVKQYEEEFNRKLLTKTDREKNRYFKFNVKSYLRADSATQAEVYFKAVRSGYYTINDIREWEDLPPVEGGDKPLISG 384 (409) T ss_pred HHHHHHHHHHHHHhhcCCcccccCcceEEeechhhhccCHHHHHHHHHHHHhCCCCCHHHHHHHhCCCCCCCcceeeecc Confidence 99999999999999999999998999999999999999999999999999999999999999999999999999999999 Q ss_pred cccccccccc--ccCCCCCCCCCCC Q lcl|Aclame:pro 400 NMLPIDMAGQ--AYLKGGDTNGEVS 422 (429) Q Consensus 400 n~~~~~~~~~--~~~~~g~~~~~~~ 422 (429) |++|++...+ ...+||+++.++. T Consensus 385 n~~~~~~~~~~~~~~~gG~~n~~e~ 409 (409) T protein:vir:96 385 DLYPIDTPLELRKSLKGGDKNVNES 409 (409) T ss_pred cccccccchhhcccccCCCCCcCCC Confidence 9999987653 3456666655544 No 30 >protein:vir:7853 Length: 518 # NCBI annotation: gp10 # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:150 # MgeName: CJW1 # Cross-refs: genbank:acc:NP_817460;genbank:gi:29565889;genbank:GeneID:1259085 Probab=100.00 E-value=1.5e-93 Score=529.48 Aligned_cols=418 Identities=18% Similarity=0.250 Sum_probs=340.2 Q ss_pred CchhhhhhcccccccccccccCCchHHHHHhhc-CCCCcc------eechhhhhccHHHHHHHHHHHHhhccCceEEEec Q lcl|Aclame:pro 1 MDSVKKFFNFEKRQTSQVIELNKDDEKLLEWLG-ISPSTI------SVKGKNALKVATVFACIKILSESVSKLPLKIYQE 73 (429) Q Consensus 1 Mg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~------~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~ 73 (429) |=+ . +-+.. .++. ...-...+.+.++ .+.... .+....++++|+||+||++||++||++||++++. T Consensus 1 ~~~-~---~~~~~-~~p~--~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~V~acV~~IA~~iA~lp~~l~~~ 73 (518) T protein:vir:78 1 MLL-A---NGQTL-SAPA--MAELSPQMQDSYYYAPAVGMQLERQFSLYGGIYKNQPWVRTVIAKRAQALARLPVKCMFT 73 (518) T ss_pred Ccc-c---Cceee-ccch--hhhhhhhhhhcccccceeceecccccchhhHHhhhhHHHHHHHHHHHHhhccCceEEEEE Confidence 211 1 11111 1111 0011112222221 122222 3334567899999999999999999999999999 Q ss_pred CCceeeeeecchhhhhhcccCcCCCCHHHHHHHHHHHHHhhCCeEEEEeeCCCCceEEEEeeCCcceEEEEcCCcceeee Q lcl|Aclame:pro 74 DEYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVYIDDVGLLNSK 153 (429) Q Consensus 74 ~~~~~~~~~~~~~~~~l~~~PN~~~s~~~~~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~l~p~~v~~~~~~~~~~~~~ 153 (429) ++++..... |+.+++|+.+||++||+++||+.++.+++++||+|++++|+..|++.+||||+|++|++..+.+..... T Consensus 74 ~~~~~~~~~-~~~~~~Ll~~PN~~~t~~~F~~~lv~~lll~Gnay~~i~r~~~G~~~~L~~l~p~~Vtv~~~~~~~~~~- 151 (518) T protein:vir:78 74 SGDTETEEH-DTGYAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQKNKSGTPEKLMPMHPSRVAIKRNSRTGRYE- 151 (518) T ss_pred cCCcccccc-chHHHHHHhCCCCCCCHHHHHHHHHHHHhhcCCeEEEEEEcCCCcEEEEEEECCCceEEEEcCCCCEEE- Confidence 887766554 444555667999999999999999999999999999999999999999999999999998876432111 Q ss_pred eeEEEeecccCceEEEccceEEEeecCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHHccCCcceEEEeCCCCCHHH Q lcl|Aclame:pro 154 TKMWYVVNTGGQQRVLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGDLNEDA 233 (429) Q Consensus 154 ~~~~~~~~~~g~~~~~~~~evih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~~e~ 233 (429) .........++..+.|+++||||||.+++.+..+|+||+.++...+....++++++.++|+||++|+|++++++.+++++ T Consensus 152 y~~~~~~~~~~~~~~~~~~eIiHir~~~~dg~~~G~Spi~~~~~~i~~~~aa~~~~~~~f~Ng~~p~gvl~~~~~ls~e~ 231 (518) T protein:vir:78 152 YYFQAGAGVGTQLVSFADDEVVPIRFFNPDGLERGLSLMESLKSTIFSEDSSRNATAAMWKNAGRPNLVLRHEKRLSPEA 231 (518) T ss_pred EEEEecCCccceeEEecCCcEEEecCCCCCcccccccHHHHHHHHHHHHHHHHHHHHHHHhcCCCccEEEecCCCCCHHH Confidence 00111112334667899999999998887777789999999999999999999999999999999999999999999999 Q ss_pred HHHHHHHHHHHhcccccccceeecCCCceeEecCCChhHHHHHHHHHHHHHHHHHHhcCChhhcCCccccccccHHHHHH Q lcl|Aclame:pro 234 KKVFRENFESMSSGLQNSHRIALMPVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKATLNNIEQQQQ 313 (429) Q Consensus 234 ~~~~~~~~~~~~~g~~~~~~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~fgvp~~~l~~~~~~~~~n~~~~~~ 313 (429) .+++++.|++.++|..|+|+++||++|++|+++++++.|+||+|.+++++++||++|||||.+||..+.++|+|.+++.+ T Consensus 232 ~~~~k~~~~~~~~G~~nag~~~vL~~G~~~~~l~~~~~d~q~le~r~~~~~eIa~afgVPp~~lg~~~~st~sn~e~~~~ 311 (518) T protein:vir:78 232 QQRLREQFDRAHAGSSNTGKTMVVEEGMEPIPLQLTAVEMQFIEARQLNREEVCGVYDIAPPIVHILDRATFSNISAQMR 311 (518) T ss_pred HHHHHHHHHHHhcCcccCCceeEcCCCceEEeccCChhHHHHHHHHHHHHHHHHHHhCCCHHHhccCCCCCchhHHHHHH Confidence 99999999999999999999999999999999999999999999999999999999999999999988899999999999 Q ss_pred HHHHHHHhHHHHHHHHHHHHhhccchhhcchhhhhhhhhhHhhhhHHHHHHHHHHHHhCCCCCHHHHHHHhCCCCCC--C Q lcl|Aclame:pro 314 QFYTDTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEA--G 391 (429) Q Consensus 314 ~~~~~~l~P~~~~i~~~l~~~ll~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~Gl~~~~--~ 391 (429) .|+++||.|++..|+++||++|++..+ .+++++||++.++++|.+++++.+.+++++|++|+||+|+++|+||++ | T Consensus 312 ~f~~~tL~P~~~~ie~eln~~L~~~~~--~~~~~~fd~~~Llr~D~~~r~~~~~~~~~~G~lT~NE~R~~~gl~pie~~~ 389 (518) T protein:vir:78 312 AFYRDTMAIPIARIQSAMDKYVGQYWV--RKNRMKFDIDDVIQPDWEAKSESTQKMVNSGVATPNEGREIMGLPRSDDPK 389 (518) T ss_pred HHHHHHHHHHHHHHHHHHHHhhccccc--CcceEEeechhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCC Confidence 999999999999999999999886644 467999999999999999999999999999999999999999999986 8 Q ss_pred cceeeeccccccccccccccCCCCCCCCC-CCCC-----CCCCC Q lcl|Aclame:pro 392 GDRLLVNGNMLPIDMAGQAYLKGGDTNGE-VSKE-----GNEGN 429 (429) Q Consensus 392 gD~~~~~~n~~~~~~~~~~~~~~g~~~~~-~~~~-----~~~~n 429 (429) ||++++++|+.|++.......++++.... .+.+ ++++. T Consensus 390 gD~~~v~~n~~pl~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 433 (518) T protein:vir:78 390 ADELYANSALQPLGATPDGAVEGEEAPAPKRPASTPVASLDQSP 433 (518) T ss_pred CceeeecccceecccccccccCCCCCCCCCCCCcccccccccCc Confidence 99999999999998766554444332111 1111 11110 No 31 >protein:vir:93943 Length: 409 # NCBI annotation: ORF010 # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:1485 # MgeName: 3A # Cross-refs: genbank:acc:YP_239936;genbank:gi:66395598;genbank:GeneID:5131009 Probab=100.00 E-value=9.4e-94 Score=530.59 Aligned_cols=403 Identities=25% Similarity=0.408 Sum_probs=346.0 Q ss_pred Cc---hhhhhhcccc-cccccccccCCchHHHHHhhcCCCCcceechhhhhccHHHHHHHHHHHHhhccCceEEEecCCc Q lcl|Aclame:pro 1 MD---SVKKFFNFEK-RQTSQVIELNKDDEKLLEWLGISPSTISVKGKNALKVATVFACIKILSESVSKLPLKIYQEDEY 76 (429) Q Consensus 1 Mg---~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~ 76 (429) |. ++.|+.+... +..+++.. ....+..|.+ .+...++.+.|+++++||+||++||++||++|++++++++. T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~--~~~~~v~~~~~~~~~~V~~ci~~Ia~~ia~lp~~~~~~~~~ 75 (409) T protein:vir:93 1 MAKENIVTRIKKKLIDNWIDQSTS---KLYDFSPWKN--RSFWGVINNTLETNETIFSAITKLSNSMASLPLKMYEDYKV 75 (409) T ss_pred CCccchhhhhhhhhhhhhhccccc---cccccccccC--ccccccchhhhhccHHHHHHHHHHHHhhhhCceeEeecccc Confidence 54 4444443221 11111111 1111122222 34456788889999999999999999999999999987653 Q ss_pred eeeeeecchhhhhhcccCcCCCCHHHHHHHHHHHHHhhCCeEEEEeeCCCCceEEEEeeCCcceEEEEcCCcceeeeeeE Q lcl|Aclame:pro 77 GIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVYIDDVGLLNSKTKM 156 (429) Q Consensus 77 ~~~~~~~~~~~~~l~~~PN~~~s~~~~~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~l~p~~v~~~~~~~~~~~~~~~~ 156 (429) ..|+++++|+.+||++||+++||+.++.+++++||+|+++.|+..|++.+|||++|+.|++..+.+. .... T Consensus 76 -----~~~~~~~lL~~~PN~~~t~~~f~~~~~~~lll~Gnay~~i~r~~~G~~~~L~~l~~~~v~~~~~~~~----~~~~ 146 (409) T protein:vir:93 76 -----VNTEVSDLLTVSPNNSLSSFDFINQIETIRNEKGNAYVLIERDIYHQPSKLFLLNPDVVEMLIENQS----RELY 146 (409) T ss_pred -----ccchHHHHHhhhcccCCCHHHHHHHHHHHHhhcCceEEEEEECCCCcEEEEEEEcCceeEEEEeCCC----cEEE Confidence 3589999999999999999999999999999999999999999999999999999999999887643 2333 Q ss_pred EEeecccCceEEEccceEEEeecCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHHccCCcceEEEeCCCCCHHHHHH Q lcl|Aclame:pro 157 WYVVNTGGQQRVLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGDLNEDAKKV 236 (429) Q Consensus 157 ~~~~~~~g~~~~~~~~evih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~~e~~~~ 236 (429) |.+...+|..+.|+++|||||+++++.++.+|+||+.++...+.++.+++++. ++.++..++++++.+..+++++.++ T Consensus 147 y~~~~~~g~~~~~~~~eVih~r~~~~~~~~~G~s~i~~~~~~i~~~~~~~~~~--~~~~~~~~~~i~~~~~~l~~e~~~~ 224 (409) T protein:vir:93 147 YSIHAATGNKLIVHNMDMLHFKHIVASNMVQGISPIDVLKNTTDFDNAVRTFN--LTEMQKPDSFMLKYGSNVGKEKRQQ 224 (409) T ss_pred EEEEcCCceEEEEccccEEEeCCCCCCCccccccHHHHHHHHHHHHHHHHHHH--HHhcCCCCceEEecCCCCCHHHHHH Confidence 45556678888999999999998888999999999999999999999998884 5566666788889999999999999 Q ss_pred HHHHHHHHhcccccccceeecCCCceeEecCCChhHHHHHHHHHHHHHHHHHHhcCChhhcCCccccccccHHHHHHHHH Q lcl|Aclame:pro 237 FRENFESMSSGLQNSHRIALMPVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKATLNNIEQQQQQFY 316 (429) Q Consensus 237 ~~~~~~~~~~g~~~~~~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~fgvp~~~l~~~~~~~~~n~~~~~~~~~ 316 (429) +++.|++.++ ++++++++++|++|+++++++.|+|++|.+++++++||++|||||.+|++.+.++++|.+++.+.|+ T Consensus 225 ~~~~~~~~~~---~~g~~~vl~~g~~~~~l~~~~~d~q~~e~r~~~~~~Ia~~fgVPp~~lg~~~~~~~sn~e~~~~~f~ 301 (409) T protein:vir:93 225 VLEDFKQYYE---ENGGILFQEPGVEIEPLPKKYVSEDIVASENLTRERVANVFQLPSVFLNARSNTNFAKNEELNRFYL 301 (409) T ss_pred HHHHHHHHhh---cCCCeeecCCCceEEEcCCChhHHHHHHHHHHHHHHHHHHhCCCHHHhCCCCCCCcccHHHHHHHHH Confidence 9999998775 5678999999999999999999999999999999999999999999999989999999999999999 Q ss_pred HHHHhHHHHHHHHHHHHhhccchhhcchhhhhhhhhhHhhhhHHHHHHHHHHHHhCCCCCHHHHHHHhCCCCCCCcceee Q lcl|Aclame:pro 317 TDTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEAGGDRLL 396 (429) Q Consensus 317 ~~~l~P~~~~i~~~l~~~ll~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~Gl~~~~~gD~~~ 396 (429) +.||.|++++|+++|+++|+++.++..+++++||++++++.|.+++++.+++++++|++|+||+|+++|+||+||||+++ T Consensus 302 ~~~l~P~~~~ie~~l~~~Ll~~~~~~~~~~~~fd~~~ll~~d~~~~~~~~~~~~~~G~~T~NE~R~~~g~~p~~ggD~~~ 381 (409) T protein:vir:93 302 QHTLLPIVKQYEEEFNRKLLTKTDREKNRYFKFNVKSYLRADSATQAEVYFKAVRSGYYTINDIREWEDLPPVEGGDKPL 381 (409) T ss_pred HHHHHHHHHHHHHHHHhhcCCcccccCcceEEeechhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCcCeee Confidence 99999999999999999999999988899999999999999999999999999999999999999999999999999999 Q ss_pred eccccccccccccc--cCCCCCCCCCCC Q lcl|Aclame:pro 397 VNGNMLPIDMAGQA--YLKGGDTNGEVS 422 (429) Q Consensus 397 ~~~n~~~~~~~~~~--~~~~g~~~~~~~ 422 (429) +++|++|++...+. ..+||++|.++. T Consensus 382 ~~~n~~~~~~~~~~~~~~~gG~~n~~e~ 409 (409) T protein:vir:93 382 ISGDLYPIDTPLELRKSLKGGDKNVNES 409 (409) T ss_pred ecccccccccchhhcccccCCCCCcCCC Confidence 99999999876643 356666555544 No 32 >protein:vir:94426 Length: 409 # NCBI annotation: ORF009 # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:1506 # MgeName: 47 # Cross-refs: genbank:acc:YP_240003;genbank:gi:66395665;genbank:GeneID:5133086 Probab=100.00 E-value=1.2e-93 Score=530.09 Aligned_cols=403 Identities=25% Similarity=0.410 Sum_probs=345.2 Q ss_pred Cch---hhhhhcccc-cccccccccCCchHHHHHhhcCCCCcceechhhhhccHHHHHHHHHHHHhhccCceEEEecCCc Q lcl|Aclame:pro 1 MDS---VKKFFNFEK-RQTSQVIELNKDDEKLLEWLGISPSTISVKGKNALKVATVFACIKILSESVSKLPLKIYQEDEY 76 (429) Q Consensus 1 Mg~---~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~ 76 (429) |+- +.|+++... +......+ ....+..|.+ .+...++.+.|+++++|++||++||++||++|+++++.++. T Consensus 1 ~~~~~~~~~~k~~~~~~~~~~~~~---~~~~~~~~~~--~~~~~v~~~~a~~~~~v~~~i~~Ia~~ia~lp~~~~~~~~~ 75 (409) T protein:vir:94 1 MAKENIVTRIKKKLIDNWIDQSAS---KLYDFSPWKN--KSFWGVINNTLETNETIFSAITKLSNSMASLPLKMYEDYKV 75 (409) T ss_pred CcccccchhhhhHHhhhhhcCCcc---cccccccccC--ccccccchhhhhccHHHHHHHHHHHHhhhhCceeEeecccc Confidence 543 333332211 11111111 0011112222 34456788899999999999999999999999999987653 Q ss_pred eeeeeecchhhhhhcccCcCCCCHHHHHHHHHHHHHhhCCeEEEEeeCCCCceEEEEeeCCcceEEEEcCCcceeeeeeE Q lcl|Aclame:pro 77 GIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVYIDDVGLLNSKTKM 156 (429) Q Consensus 77 ~~~~~~~~~~~~~l~~~PN~~~s~~~~~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~l~p~~v~~~~~~~~~~~~~~~~ 156 (429) ..|+++++|+.+||++||+++||+.++.+++++||+|++++|+..|.+.+|||++|++|++..+.+. .... T Consensus 76 -----~~~~~~~lL~~~PN~~~t~~~f~~~~~~~lll~Gnay~~i~r~~~G~~~~L~~l~~~~v~v~~~~~~----~~~~ 146 (409) T protein:vir:94 76 -----VNTEVSDLLTVSPNNSLSSFDFINQIETIRNEKGNAYVLIERDIYHQPSKLFLLNPDVVEMLIENQS----RELY 146 (409) T ss_pred -----cchhHHHHHhhhcccCCCHHHHHHHHHHHHhhcCCeEEEEEECCCCcEEEEEEEcCceeEEEEeCCC----cEEE Confidence 3589999999999999999999999999999999999999999999999999999999999887643 2233 Q ss_pred EEeecccCceEEEccceEEEeecCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHHccCCcceEEEeCCCCCHHHHHH Q lcl|Aclame:pro 157 WYVVNTGGQQRVLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGDLNEDAKKV 236 (429) Q Consensus 157 ~~~~~~~g~~~~~~~~evih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~~e~~~~ 236 (429) |.+...+|..+.|+++||||||++++.++.+|+||+.++...+.+..++.++. ++.++..++++++.+..+++++.++ T Consensus 147 y~~~~~~g~~~~~~~~dvih~r~~~~~~~~~G~s~l~~~~~~i~~~~~~~~~~--~~~~~~~~~~i~~~~~~l~~e~~~~ 224 (409) T protein:vir:94 147 YSIHAATGNKLIVHNMDMLHFKHIVASNMVQGISPIDVLKNTTDFDNAVRTFN--LTEMQKPDSFMLKYGSNVGKEKRQQ 224 (409) T ss_pred EEEEcCCceEEEEccccEEEecCCCCCCccccccHHHHHHHHHHHHHHHHHHH--HHhcCCCCeeEEecCCCCCHHHHHH Confidence 44556678888999999999998888999999999999999999999998885 5556666778889999999999999 Q ss_pred HHHHHHHHhcccccccceeecCCCceeEecCCChhHHHHHHHHHHHHHHHHHHhcCChhhcCCccccccccHHHHHHHHH Q lcl|Aclame:pro 237 FRENFESMSSGLQNSHRIALMPVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKATLNNIEQQQQQFY 316 (429) Q Consensus 237 ~~~~~~~~~~g~~~~~~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~fgvp~~~l~~~~~~~~~n~~~~~~~~~ 316 (429) +++.|++.++ ++++++++++|++|+++++++.|+|++|.+++++++||++|||||.+|++.+.++++|.+++.+.|+ T Consensus 225 ~~~~~~~~~~---~~g~~~vl~~g~~~~~l~~~~~d~q~~e~~~~~~~~Ia~~fgVPp~~lg~~~~~~~sn~e~~~~~f~ 301 (409) T protein:vir:94 225 VLEDFKQYYE---ENGGILFQEPGVEIEPLPKKYVSEDIVASENLTRERVANVFQLPSVFLNARSNTNFAKNEELNRFYL 301 (409) T ss_pred HHHHHHHHhh---cCCCeeecCCCceEEEcCCChhHHHHHHHHHHHHHHHHHHhCCCHHHhCCCCCCCcccHHHHHHHHH Confidence 9999999875 5688999999999999999999999999999999999999999999999988899999999999999 Q ss_pred HHHHhHHHHHHHHHHHHhhccchhhcchhhhhhhhhhHhhhhHHHHHHHHHHHHhCCCCCHHHHHHHhCCCCCCCcceee Q lcl|Aclame:pro 317 TDTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEAGGDRLL 396 (429) Q Consensus 317 ~~~l~P~~~~i~~~l~~~ll~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~Gl~~~~~gD~~~ 396 (429) ++||.|+++.|+++|+++|++..+...+++++||.+++++.|.+++++.+.+++++|++|+||+|+++|+||+||||+++ T Consensus 302 ~~~l~P~~~~ie~~ln~~Ll~~~~~~~~~~i~fd~~~ll~~d~~~~~~~~~~~~~~G~~T~NE~R~~~g~~p~~ggD~~~ 381 (409) T protein:vir:94 302 QHTLLPIVKQYEEEFNRKLLTKTDREKNRYFKFNVKSYLRADSATQAEVYFKAVRSGYYTINDIREWEDLPPVEGGDKPL 381 (409) T ss_pred HHHHHHHHHHHHHHHHHhhCCcccccCcceEEeechhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCcCeEe Confidence 99999999999999999999999988899999999999999999999999999999999999999999999999999999 Q ss_pred eccccccccccccc--cCCCCCCCCCCC Q lcl|Aclame:pro 397 VNGNMLPIDMAGQA--YLKGGDTNGEVS 422 (429) Q Consensus 397 ~~~n~~~~~~~~~~--~~~~g~~~~~~~ 422 (429) +++|++|++...+. ..+||+++.++. T Consensus 382 ~~~n~~~~~~~~~~~~~~kGG~~n~~e~ 409 (409) T protein:vir:94 382 ISGDLYPIDTPLELRKSLKGGDKNVNES 409 (409) T ss_pred ecccccccccchhhcccccCCCCCcCCC Confidence 99999999876543 356666555544 No 33 >protein:vir:101648 Length: 518 # NCBI annotation: gp11 # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:1515 # MgeName: 244 # Cross-refs: genbank:acc:YP_654766;genbank:gi:109302764;genbank:GeneID:4156082 Probab=100.00 E-value=3.9e-93 Score=527.20 Aligned_cols=418 Identities=19% Similarity=0.263 Sum_probs=339.9 Q ss_pred CchhhhhhcccccccccccccCCchHHHHHhhcC-CCCc------ceechhhhhccHHHHHHHHHHHHhhccCceEEEec Q lcl|Aclame:pro 1 MDSVKKFFNFEKRQTSQVIELNKDDEKLLEWLGI-SPST------ISVKGKNALKVATVFACIKILSESVSKLPLKIYQE 73 (429) Q Consensus 1 Mg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~------~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~ 73 (429) |=+- + -+.-.+++ .....+.+.+.++. +... ..+....++++++||+||++||++||++|+++++. T Consensus 1 ~~~~----~-~~~~~~p~--~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~V~acV~~IA~~iA~lpl~l~~~ 73 (518) T protein:vir:10 1 MLLA----N-GQTLSAPA--MAELSPQMQDSYYYAPAVGMQLERQFSLYGGIYKNQPWVRTVIAKRAQALARLPVKCMFT 73 (518) T ss_pred Cccc----C-ceeecCch--hhhhhhhhhcccccccccceecccccchhhHHHhhhHHHHHHHHHHHHhhccCceEEEEE Confidence 2111 1 01111111 01111112222211 1111 23334567899999999999999999999999999 Q ss_pred CCceeeeeecchhhhhhcccCcCCCCHHHHHHHHHHHHHhhCCeEEEEeeCCCCceEEEEeeCCcceEEEEcCCcceeee Q lcl|Aclame:pro 74 DEYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVYIDDVGLLNSK 153 (429) Q Consensus 74 ~~~~~~~~~~~~~~~~l~~~PN~~~s~~~~~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~l~p~~v~~~~~~~~~~~~~ 153 (429) ++++......|++ ++|+.+||++||+++||+.++.+++++||+|++++|+..|++.+|||++|++|++..+.+..... T Consensus 74 ~~~~~~~~~~~~~-~~Ll~~PN~~~t~~~F~~~lv~~lll~Gnay~~i~r~~~G~~~~L~~l~p~~v~v~~~~~~~~~~- 151 (518) T protein:vir:10 74 SGDTETEESDTGY-AKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQKNKSGTPEKLMPMHPSRVAIKRNSRTGRYE- 151 (518) T ss_pred cCCCceeccchHH-HHHHcCCCCCCCHHHHHHHHHHHHhhcCCeEEEEEECCCCcEEEEEEECCCceEEEEcCCCCEEE- Confidence 8887665555555 55557999999999999999999999999999999999999999999999999998876432111 Q ss_pred eeEEEeecccCceEEEccceEEEeecCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHHccCCcceEEEeCCCCCHHH Q lcl|Aclame:pro 154 TKMWYVVNTGGQQRVLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGDLNEDA 233 (429) Q Consensus 154 ~~~~~~~~~~g~~~~~~~~evih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~~e~ 233 (429) .........++..+.|+++||||||.+++.+..+|+||+.++...+....++++++.++|+||++|+|+++.++.+++++ T Consensus 152 y~~~~~~~~~~~~~~~~~~eViHir~~s~dg~~~G~spi~~a~~~i~~~~a~~~~~~~~f~ng~~p~gil~~~~~ls~e~ 231 (518) T protein:vir:10 152 YYFQAGAGVGTQLVSFADDEVVPIRFFNPDGLERGLSLMESLKSTIFSEDSSRNATAAMWKNAGRPNLVLRHEKRLSEAA 231 (518) T ss_pred EEEEecCCccceEEEecCCcEEEecCCCCCcccccccHHHHHHHHHHHHHHHHHHHHHHHhcCCCccEEEecCCCCCHHH Confidence 11111112334567899999999998887777799999999999999999999999999999999999999999999999 Q ss_pred HHHHHHHHHHHhcccccccceeecCCCceeEecCCChhHHHHHHHHHHHHHHHHHHhcCChhhcCCccccccccHHHHHH Q lcl|Aclame:pro 234 KKVFRENFESMSSGLQNSHRIALMPVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKATLNNIEQQQQ 313 (429) Q Consensus 234 ~~~~~~~~~~~~~g~~~~~~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~fgvp~~~l~~~~~~~~~n~~~~~~ 313 (429) .+++++.|++.++|..|+|+++||++|++|+++++++.|+||+|.+++++++||++|||||.+||..+.+|++|.+++.+ T Consensus 232 ~~~~k~~~~~~~~G~~nag~v~vL~~G~~~~~l~~s~~D~q~le~r~~~~~eIa~afgVPp~~lg~~~~~t~sn~eq~~~ 311 (518) T protein:vir:10 232 QQRLREQFDRAHSGSSNTGKTMVVEEGMEPIPLQLTAVEMQFIEARQLNREEVCGVYDIAPPIVHILDRATFSNISAQMR 311 (518) T ss_pred HHHHHHHHHHHhcCccccCcceEcCCCceEEEccCChhHHHHHHHHHHHHHHHHHHhCCCHHHhccCCCCCchhHHHHHH Confidence 99999999999999999999999999999999999999999999999999999999999999999988999999999999 Q ss_pred HHHHHHHhHHHHHHHHHHHHhhccchhhcchhhhhhhhhhHhhhhHHHHHHHHHHHHhCCCCCHHHHHHHhCCCCCC--C Q lcl|Aclame:pro 314 QFYTDTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEA--G 391 (429) Q Consensus 314 ~~~~~~l~P~~~~i~~~l~~~ll~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~Gl~~~~--~ 391 (429) .|++.||.|+++.|+++|+++|++..+ .+++++||++.+++.|.+++++.+.+++++|++|+||+|+++|+||++ | T Consensus 312 ~f~~~tL~P~l~~ie~~ln~~L~~~~~--~~~~~~fd~~~llr~D~~~r~~~~~~~~~~G~lT~NE~R~~~Gl~pie~~~ 389 (518) T protein:vir:10 312 AFYRDTMAIPIARIQSAMDKYVGQYWV--RKNRMKFDIDDVIQPDWEAKSESTQKMVNSGVATPNEGREIMGLPRSDDPK 389 (518) T ss_pred HHHHHHHHHHHHHHHHHHHHhhccccc--CCceEEEechhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCC Confidence 999999999999999999999887654 467999999999999999999999999999999999999999999985 8 Q ss_pred cceeeeccccccccccccccCCCCCCCC-CCCCCC-----CCCC Q lcl|Aclame:pro 392 GDRLLVNGNMLPIDMAGQAYLKGGDTNG-EVSKEG-----NEGN 429 (429) Q Consensus 392 gD~~~~~~n~~~~~~~~~~~~~~g~~~~-~~~~~~-----~~~n 429 (429) ||++++++|+.|++.......++++... +.+.+. +++. T Consensus 390 gD~~~~~~n~~pl~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 433 (518) T protein:vir:10 390 ADELYANSALQPLGATPDGAVEGEEAPAPKRPASTPVASLDQSP 433 (518) T ss_pred CCeeeecccceecccccccccCCCCCCCCCCCCccccccccccc Confidence 9999999999998876655544433211 111110 0100 No 34 >protein:vir:98396 Length: 441 # NCBI annotation: portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:1581 # MgeName: phiPVL(108) # Cross-refs: genbank:acc:YP_918929;genbank:gi:119443691;genbank:GeneID:4594558 Probab=100.00 E-value=4e-93 Score=527.15 Aligned_cols=413 Identities=23% Similarity=0.353 Sum_probs=339.5 Q ss_pred CchhhhhhcccccccccccccCCchHHHHHhhc--CCCCcceechhhhhccHHHHHHHHHHHHhhccCceEEEecCCcee Q lcl|Aclame:pro 1 MDSVKKFFNFEKRQTSQVIELNKDDEKLLEWLG--ISPSTISVKGKNALKVATVFACIKILSESVSKLPLKIYQEDEYGI 78 (429) Q Consensus 1 Mg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~~ 78 (429) |+++.-|++.++|... . ...+...+...++ ...+...++...|+++++||+||++||++||++|+++++.++ T Consensus 23 ~~~~~~f~~~e~r~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~V~acv~~Ia~~iA~lpl~~~~~~~--- 96 (441) T protein:vir:98 23 LVVVGIFYKNEKRDLQ--Y-NEDDLQMMVQTLPGFQGTKLRQYKDIEAIRHSDIFTAVMMIASDLARMPIRVTVNGQ--- 96 (441) T ss_pred hhcccccccccccccc--C-CCcchHHHHHHhhcccccCccccchhhhhccHHHHHHHHHHHHhhccCceEEecCCc--- Confidence 4444333333333221 1 1122223333222 123455688899999999999999999999999999997432 Q ss_pred eeeecchhhhhhcccCcCCCCHHHHHHHHHHHHHhhCCeEEEEeeCCCCceEEEEeeCCcceEEEEcCCcceeeeeeEEE Q lcl|Aclame:pro 79 QRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVYIDDVGLLNSKTKMWY 158 (429) Q Consensus 79 ~~~~~~~~~~~l~~~PN~~~s~~~~~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~l~p~~v~~~~~~~~~~~~~~~~~~ 158 (429) ....|+++++|+.+||++||+++||+.++.+++++||||++++|+..|++.+|||++|+.|++..+.++...+.. ... T Consensus 97 -~~~~~~~~~lL~~~PN~~~t~~~f~~~l~~~lll~Gnay~~i~r~~~G~~~~L~~i~~~~v~v~~~~~g~~~~~~-~~~ 174 (441) T protein:vir:98 97 -INYSDRIVNLLNTRPNPMYNGYIFKLVVFVSALLTSHGYIEITRDKTGEPMNLTFRKTSEIELKLDARGRLYYFH-QRI 174 (441) T ss_pred -ccccchHHHHHhcccccCCCHHHHHHHHHHHHhhcCCeEEEEEEcCCCcEEEEEEEcCceeEEEECCCCcEEEEE-EEe Confidence 345689999999999999999999999999999999999999999999999999999999999988765433211 111 Q ss_pred eecccCceEEEccceEEEeecCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHHccCCcceEEEeCCCC-CHHHHHHH Q lcl|Aclame:pro 159 VVNTGGQQRVLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGDL-NEDAKKVF 237 (429) Q Consensus 159 ~~~~~g~~~~~~~~evih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~-~~e~~~~~ 237 (429) .....+..+.|+++||||||++ +.++++|+||+.++..++.+..+++++..++|+||++|+|++++++.+ ++++.+++ T Consensus 175 ~~~~~~~~~~~~~~dviHir~~-~~dg~~G~spi~~~~~~i~~~~a~~~~~~~~f~ng~~~~gil~~~~~~~~~e~~~~~ 253 (441) T protein:vir:98 175 DSNGNNIERNVKFEDMLDIKFY-SLDGINGLSLLDTLSRTIESDNNGKDFLNNFLRNGTHAGGILKMKGVLDNKKARDRA 253 (441) T ss_pred ccCcceeeEEEccccEEEeccC-CCCCccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCCcEEEEeCCCCCCHHHHHHH Confidence 1123345678999999999964 567789999999999999999999999999999999999999999887 47788999 Q ss_pred HHHHHHHhcccccccceeecCCCceeEecCCChhHHHHHHHHHHHHHHHHHHhcCChhhcCCccccccccHHHHHHHHHH Q lcl|Aclame:pro 238 RENFESMSSGLQNSHRIALMPVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKATLNNIEQQQQQFYT 317 (429) Q Consensus 238 ~~~~~~~~~g~~~~~~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~fgvp~~~l~~~~~~~~~n~~~~~~~~~~ 317 (429) ++.|++.++|..|+|+++||++|++|++++++++|+||+|.+++++++||++|||||.+|+... .+ ++.+++...|. T Consensus 254 ~~~~~~~~~G~~nag~~~vl~~g~~~~~l~~~~~d~q~~e~r~~~~~~Ia~~fgVPp~~lg~~~-~~-~s~~q~~~~y~- 330 (441) T protein:vir:98 254 REEFHKSFSGTKQAGKVVVLDESMTFDQLEVDTEVLKLIRENKSSTREIAGVFGIPLHKFGIET-AN-MSITDANLDYL- 330 (441) T ss_pred HHHHHHHhcCccccCcceecCCCceEEEccCChhHHHHHHHHHHhHHHHHHHhCCCHHHcCCCC-CC-ccHHHHHHHHH- Confidence 9999999999999999999999999999999999999999999999999999999999998633 22 35566655555 Q ss_pred HHHhHHHHHHHHHHHHhhccchhhcchhhhhhhhhhHhhhhHHHHHHHHHHHHhCCCCCHHHHHHHhCCCCCCCcc--ee Q lcl|Aclame:pro 318 DTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEAGGD--RL 395 (429) Q Consensus 318 ~~l~P~~~~i~~~l~~~ll~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~Gl~~~~~gD--~~ 395 (429) .||.|++++||++|+++|++.. .+++++||++.+++.|.+++++.+++++++|++|+||+|+++|+||+|||| .+ T Consensus 331 ~tl~P~~~~ie~~ln~~L~~~~---~~~~~~fd~~~llr~d~~~~~~~~~~~~~~G~~T~NE~R~~~gl~pi~gGd~~~~ 407 (441) T protein:vir:98 331 STLKPYITCVCAELNFKFNDEY---VNREFKFDTTEIRVVDEKTQAEIDKINIDSGKMNIDEIRQRDGLAPIPGGNGSIH 407 (441) T ss_pred HHHHHHHHHHHHHHHhhccccc---cCceEEEechhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCcceE Confidence 6999999999999999988654 467899999999999999999999999999999999999999999999988 57 Q ss_pred eeccccccccccccccCCCCCCCCCCCCCCCCCC Q lcl|Aclame:pro 396 LVNGNMLPIDMAGQAYLKGGDTNGEVSKEGNEGN 429 (429) Q Consensus 396 ~~~~n~~~~~~~~~~~~~~g~~~~~~~~~~~~~n 429 (429) ++|+|++|++..++++...... ++...+++|+| T Consensus 408 ~~~~n~~~~~~~~~~q~~~~~~-~~~~~kgGe~n 440 (441) T protein:vir:98 408 RVDLNHVNIELVDEYQMNKSRA-TDKKLKGGEEN 440 (441) T ss_pred eecccccccccccccccccccc-cccccCCCCCC Confidence 8999999999887665543333 33455666666 No 35 >protein:vir:79984 Length: 441 # NCBI annotation: portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:1875 # MgeName: tp310-3 # Cross-refs: genbank:acc:YP_001430000;genbank:gi:156604055;genbank:GeneID:5525444 Probab=100.00 E-value=7.7e-93 Score=525.59 Aligned_cols=413 Identities=23% Similarity=0.345 Sum_probs=336.7 Q ss_pred CchhhhhhcccccccccccccCCchHHHHHhhc--CCCCcceechhhhhccHHHHHHHHHHHHhhccCceEEEecCCcee Q lcl|Aclame:pro 1 MDSVKKFFNFEKRQTSQVIELNKDDEKLLEWLG--ISPSTISVKGKNALKVATVFACIKILSESVSKLPLKIYQEDEYGI 78 (429) Q Consensus 1 Mg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~~ 78 (429) |++..-|++.++|... ....+...+...+. ...+...++...|+++++||+||++||++||++|+++++.++ T Consensus 23 ~~~~~lf~~~e~R~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~V~~cv~~Ia~~iA~lp~~~~~~~~--- 96 (441) T protein:vir:79 23 LVVVGIFYKNEKRDLQ---YNEDDLQMMVQTLPGFQGTKLRQYKDIEAIRHSDIFTAVMMIASDLARMPIRVTVNGQ--- 96 (441) T ss_pred hhcccccccccccccc---CCCcchHHHHHHhcccCcccccccchhhhhccHHHHHHHHHHHHhhccCceeeecCcc--- Confidence 2222222222333211 11222233333222 123444688889999999999999999999999999986432 Q ss_pred eeeecchhhhhhcccCcCCCCHHHHHHHHHHHHHhhCCeEEEEeeCCCCceEEEEeeCCcceEEEEcCCcceeeeeeEEE Q lcl|Aclame:pro 79 QRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVYIDDVGLLNSKTKMWY 158 (429) Q Consensus 79 ~~~~~~~~~~~l~~~PN~~~s~~~~~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~l~p~~v~~~~~~~~~~~~~~~~~~ 158 (429) ....|+++++|+.+||++||+++||+.++.+++++||||++++|+..|++.+|||++|+.|++..++++...+.. ... T Consensus 97 -~~~~~~~~~lL~~~PN~~~t~~~f~~~~~~~lll~Gnay~~i~r~~~G~~~~L~~i~~~~v~v~~d~~g~~~~~~-~~~ 174 (441) T protein:vir:79 97 -INYSDRIVNLLNTRPNPMYNGYIFKLVVFVSALLTSHGYIEITRDKTGEPMNLTFRKTSEIELKSDARGRLYYFH-QRI 174 (441) T ss_pred -ccccchHHHHHhcccCcCCCHHHHHHHHHHHHhhcCCeEEEEEECCCCcEEEEEEEcCceeEEEECCCccEEEEE-EEe Confidence 345689999999999999999999999999999999999999999999999999999999999988765432211 111 Q ss_pred eecccCceEEEccceEEEeecCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHHccCCcceEEEeCCCC-CHHHHHHH Q lcl|Aclame:pro 159 VVNTGGQQRVLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGDL-NEDAKKVF 237 (429) Q Consensus 159 ~~~~~g~~~~~~~~evih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~-~~e~~~~~ 237 (429) .....+..+.++++||||||++ +.++++|+||+.++.+++.++.+++++..++|+||++|+|++++++.. ++++.+++ T Consensus 175 ~~~~~~~~~~~~~~dvih~k~~-~~dg~~G~spl~~~~~~i~~~~~~~~~~~~~f~ng~~p~gil~~~~~~~~~e~~e~~ 253 (441) T protein:vir:79 175 DSNGNNIERNVKFEDMLDIKFY-SLDGINGLSLLDTLSRTIESDNNGKDFLNNFLRNGTHAGGILKMKGVLDNKKARDRA 253 (441) T ss_pred ccCCceeEEEEccccEEEeccC-CCCCccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCCcEEEEcCCCCCCHHHHHHH Confidence 1123345678999999999964 677899999999999999999999999999999999999999999887 57888999 Q ss_pred HHHHHHHhcccccccceeecCCCceeEecCCChhHHHHHHHHHHHHHHHHHHhcCChhhcCCccccccccHHHHHHHHHH Q lcl|Aclame:pro 238 RENFESMSSGLQNSHRIALMPVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKATLNNIEQQQQQFYT 317 (429) Q Consensus 238 ~~~~~~~~~g~~~~~~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~fgvp~~~l~~~~~~~~~n~~~~~~~~~~ 317 (429) ++.|++.++|..|+|+++|+++|++|++++++++|+||+|.+++++++||++|||||.+||... .+ ++.+++.. ++. T Consensus 254 r~~~~~~~~G~~nag~~~vl~~G~~~~~l~~~~~d~q~~e~~~~~~~~Ia~~fgVPp~~lg~~~-~~-~s~~q~~~-~~~ 330 (441) T protein:vir:79 254 REEFHKSFSGTKQAGKVVVLDESMTFDQLEVDTEVLKLIRENKSSTREIAGVFGIPLHKFGIET-AN-MSITDANL-DYL 330 (441) T ss_pred HHHHHHHhcCccccCcceecCCCceEEEccCChhHHHHHHHHHHhHHHHHHHhCCCHHHcCCCC-CC-ccHHHHHH-HHH Confidence 9999999999999999999999999999999999999999999999999999999999998633 23 34555554 456 Q ss_pred HHHhHHHHHHHHHHHHhhccchhhcchhhhhhhhhhHhhhhHHHHHHHHHHHHhCCCCCHHHHHHHhCCCCCCCcc--ee Q lcl|Aclame:pro 318 DTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEAGGD--RL 395 (429) Q Consensus 318 ~~l~P~~~~i~~~l~~~ll~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~Gl~~~~~gD--~~ 395 (429) .||.|++++||++|+++|+... .+++++||++.+++.|.+++++.+.+++++|++|+||+|+++||||+|||| .+ T Consensus 331 ~tl~P~~~~ie~eln~kl~~~~---~~~~~~fd~~~llr~D~~~~~~~~~~~i~~G~~T~NE~R~~~gl~Pi~ggd~~~~ 407 (441) T protein:vir:79 331 STLKPYITCVCAELNFKFNDEY---VNREFKFDTTEIRVVDEKTQAEIDKINIDSGKMNIDEIRQRDGLAPIPGGNGSIH 407 (441) T ss_pred HHHHHHHHHHHHHHhhhccccc---cCceEEeechhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCcceE Confidence 7999999999999999987653 468899999999999999999999999999999999999999999999988 57 Q ss_pred eeccccccccccccccCCCCCCCCCCCCCCCCCC Q lcl|Aclame:pro 396 LVNGNMLPIDMAGQAYLKGGDTNGEVSKEGNEGN 429 (429) Q Consensus 396 ~~~~n~~~~~~~~~~~~~~g~~~~~~~~~~~~~n 429 (429) ++++|++|++..++.+...... .+.+.+++|+| T Consensus 408 ~~~~n~~~~~~~~~~~~~~~~~-~~~~~kgGe~~ 440 (441) T protein:vir:79 408 RVDLNHVNIELVDEYQMNKSRA-TDKKLKGGEEN 440 (441) T ss_pred eecccccccccccccccccccc-cccccCCCCCC Confidence 8999999999887655443333 23445666666 No 36 >protein:vir:9408 Length: 441 # NCBI annotation: portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:167 # MgeName: phi 13 # Cross-refs: genbank:acc:NP_803386;genbank:gi:29028698;genbank:GeneID:1258164 Probab=100.00 E-value=7.7e-93 Score=525.59 Aligned_cols=413 Identities=23% Similarity=0.345 Sum_probs=336.7 Q ss_pred CchhhhhhcccccccccccccCCchHHHHHhhc--CCCCcceechhhhhccHHHHHHHHHHHHhhccCceEEEecCCcee Q lcl|Aclame:pro 1 MDSVKKFFNFEKRQTSQVIELNKDDEKLLEWLG--ISPSTISVKGKNALKVATVFACIKILSESVSKLPLKIYQEDEYGI 78 (429) Q Consensus 1 Mg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~~ 78 (429) |++..-|++.++|... ....+...+...+. ...+...++...|+++++||+||++||++||++|+++++.++ T Consensus 23 ~~~~~lf~~~e~R~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~V~~cv~~Ia~~iA~lp~~~~~~~~--- 96 (441) T protein:vir:94 23 LVVVGIFYKNEKRDLQ---YNEDDLQMMVQTLPGFQGTKLRQYKDIEAIRHSDIFTAVMMIASDLARMPIRVTVNGQ--- 96 (441) T ss_pred hhcccccccccccccc---CCCcchHHHHHHhcccCcccccccchhhhhccHHHHHHHHHHHHhhccCceeeecCcc--- Confidence 2222222222333211 11222233333222 123444688889999999999999999999999999986432 Q ss_pred eeeecchhhhhhcccCcCCCCHHHHHHHHHHHHHhhCCeEEEEeeCCCCceEEEEeeCCcceEEEEcCCcceeeeeeEEE Q lcl|Aclame:pro 79 QRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVYIDDVGLLNSKTKMWY 158 (429) Q Consensus 79 ~~~~~~~~~~~l~~~PN~~~s~~~~~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~l~p~~v~~~~~~~~~~~~~~~~~~ 158 (429) ....|+++++|+.+||++||+++||+.++.+++++||||++++|+..|++.+|||++|+.|++..++++...+.. ... T Consensus 97 -~~~~~~~~~lL~~~PN~~~t~~~f~~~~~~~lll~Gnay~~i~r~~~G~~~~L~~i~~~~v~v~~d~~g~~~~~~-~~~ 174 (441) T protein:vir:94 97 -INYSDRIVNLLNTRPNPMYNGYIFKLVVFVSALLTSHGYIEITRDKTGEPMNLTFRKTSEIELKSDARGRLYYFH-QRI 174 (441) T ss_pred -ccccchHHHHHhcccCcCCCHHHHHHHHHHHHhhcCCeEEEEEECCCCcEEEEEEEcCceeEEEECCCccEEEEE-EEe Confidence 345689999999999999999999999999999999999999999999999999999999999988765432211 111 Q ss_pred eecccCceEEEccceEEEeecCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHHccCCcceEEEeCCCC-CHHHHHHH Q lcl|Aclame:pro 159 VVNTGGQQRVLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGDL-NEDAKKVF 237 (429) Q Consensus 159 ~~~~~g~~~~~~~~evih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~-~~e~~~~~ 237 (429) .....+..+.++++||||||++ +.++++|+||+.++.+++.++.+++++..++|+||++|+|++++++.. ++++.+++ T Consensus 175 ~~~~~~~~~~~~~~dvih~k~~-~~dg~~G~spl~~~~~~i~~~~~~~~~~~~~f~ng~~p~gil~~~~~~~~~e~~e~~ 253 (441) T protein:vir:94 175 DSNGNNIERNVKFEDMLDIKFY-SLDGINGLSLLDTLSRTIESDNNGKDFLNNFLRNGTHAGGILKMKGVLDNKKARDRA 253 (441) T ss_pred ccCCceeEEEEccccEEEeccC-CCCCccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCCcEEEEcCCCCCCHHHHHHH Confidence 1123345678999999999964 677899999999999999999999999999999999999999999887 57888999 Q ss_pred HHHHHHHhcccccccceeecCCCceeEecCCChhHHHHHHHHHHHHHHHHHHhcCChhhcCCccccccccHHHHHHHHHH Q lcl|Aclame:pro 238 RENFESMSSGLQNSHRIALMPVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKATLNNIEQQQQQFYT 317 (429) Q Consensus 238 ~~~~~~~~~g~~~~~~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~fgvp~~~l~~~~~~~~~n~~~~~~~~~~ 317 (429) ++.|++.++|..|+|+++|+++|++|++++++++|+||+|.+++++++||++|||||.+||... .+ ++.+++.. ++. T Consensus 254 r~~~~~~~~G~~nag~~~vl~~G~~~~~l~~~~~d~q~~e~~~~~~~~Ia~~fgVPp~~lg~~~-~~-~s~~q~~~-~~~ 330 (441) T protein:vir:94 254 REEFHKSFSGTKQAGKVVVLDESMTFDQLEVDTEVLKLIRENKSSTREIAGVFGIPLHKFGIET-AN-MSITDANL-DYL 330 (441) T ss_pred HHHHHHHhcCccccCcceecCCCceEEEccCChhHHHHHHHHHHhHHHHHHHhCCCHHHcCCCC-CC-ccHHHHHH-HHH Confidence 9999999999999999999999999999999999999999999999999999999999998633 23 34555554 456 Q ss_pred HHHhHHHHHHHHHHHHhhccchhhcchhhhhhhhhhHhhhhHHHHHHHHHHHHhCCCCCHHHHHHHhCCCCCCCcc--ee Q lcl|Aclame:pro 318 DTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEAGGD--RL 395 (429) Q Consensus 318 ~~l~P~~~~i~~~l~~~ll~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~Gl~~~~~gD--~~ 395 (429) .||.|++++||++|+++|+... .+++++||++.+++.|.+++++.+.+++++|++|+||+|+++||||+|||| .+ T Consensus 331 ~tl~P~~~~ie~eln~kl~~~~---~~~~~~fd~~~llr~D~~~~~~~~~~~i~~G~~T~NE~R~~~gl~Pi~ggd~~~~ 407 (441) T protein:vir:94 331 STLKPYITCVCAELNFKFNDEY---VNREFKFDTTEIRVVDEKTQAEIDKINIDSGKMNIDEIRQRDGLAPIPGGNGSIH 407 (441) T ss_pred HHHHHHHHHHHHHHhhhccccc---cCceEEeechhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCcceE Confidence 7999999999999999987653 468899999999999999999999999999999999999999999999988 57 Q ss_pred eeccccccccccccccCCCCCCCCCCCCCCCCCC Q lcl|Aclame:pro 396 LVNGNMLPIDMAGQAYLKGGDTNGEVSKEGNEGN 429 (429) Q Consensus 396 ~~~~n~~~~~~~~~~~~~~g~~~~~~~~~~~~~n 429 (429) ++++|++|++..++.+...... .+.+.+++|+| T Consensus 408 ~~~~n~~~~~~~~~~~~~~~~~-~~~~~kgGe~~ 440 (441) T protein:vir:94 408 RVDLNHVNIELVDEYQMNKSRA-TDKKLKGGEEN 440 (441) T ss_pred eecccccccccccccccccccc-cccccCCCCCC Confidence 8999999999887655443333 23445666666 No 37 >protein:vir:4598 Length: 416 # NCBI annotation: portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:101 # MgeName: PVL # Cross-refs: genbank:acc:NP_058443;genbank:gi:9635169;genbank:GeneID:1262702 Probab=100.00 E-value=1.4e-92 Score=524.09 Aligned_cols=408 Identities=23% Similarity=0.348 Sum_probs=339.1 Q ss_pred CchhhhhhcccccccccccccCCchHHHHHhh-c-CCCCcceechhhhhccHHHHHHHHHHHHhhccCceEEEecCCcee Q lcl|Aclame:pro 1 MDSVKKFFNFEKRQTSQVIELNKDDEKLLEWL-G-ISPSTISVKGKNALKVATVFACIKILSESVSKLPLKIYQEDEYGI 78 (429) Q Consensus 1 Mg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~~ 78 (429) ||||.++. ++.... ...+...+...+ + ...+...++...|+++++||+||++||+++|++||++++.++ T Consensus 1 Mg~f~~~~---~r~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~v~~cv~~Ia~~iA~~p~~~~~~~~--- 71 (416) T protein:vir:45 1 MGIFYKNE---KRDLQY---NEDDLQMMVQTLPGFQGTKLRQYKDIEAIRHSDIFTAVMMIASDLARMPIRVTVNGQ--- 71 (416) T ss_pred CCcccccc---cccccC---CCcchhHHHHHhccccccCccccchhhhhcchHHHHHHHHHHHhhccCceEEecCcc--- Confidence 99987542 222211 112223333322 2 233555688889999999999999999999999999986443 Q ss_pred eeeecchhhhhhcccCcCCCCHHHHHHHHHHHHHhhCCeEEEEeeCCCCceEEEEeeCCcceEEEEcCCcceeeeeeEEE Q lcl|Aclame:pro 79 QRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVYIDDVGLLNSKTKMWY 158 (429) Q Consensus 79 ~~~~~~~~~~~l~~~PN~~~s~~~~~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~l~p~~v~~~~~~~~~~~~~~~~~~ 158 (429) ....|+++++|+.+||++||+++||+.++.+++++||||++++++..|++.+|||++|+.|++..+.++...+. ++ T Consensus 72 -~~~~~~~~~lL~~~PN~~~t~~~f~~~~~~~lll~Gna~~~i~r~~~G~~~~L~~i~~~~v~v~~~~~g~~~~~---~~ 147 (416) T protein:vir:45 72 -INYSDRIVNLLNTRPNPMYNGYIFKLVVFVSALLTSHGYIEITRDKTGEPMNLTFRKTSEIELKSDARGRLYYF---HQ 147 (416) T ss_pred -ccccchHHHHHhcccccCCCHHHHHHHHHHHHhhcCCeEEEEEECCCCcEEEEEEEcCceeEEEECCCccEEEE---EE Confidence 34568999999999999999999999999999999999999999999999999999999999998876443221 11 Q ss_pred ee--cccCceEEEccceEEEeecCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHHccCCcceEEEeCCCC-CHHHHH Q lcl|Aclame:pro 159 VV--NTGGQQRVLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGDL-NEDAKK 235 (429) Q Consensus 159 ~~--~~~g~~~~~~~~evih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~-~~e~~~ 235 (429) .. ...+..+.|++++|||||++ +.++++|+||+.++.+++.++.++++++.++|+||++|+|++++++.. ++++.+ T Consensus 148 ~~~~~~~~~~~~~~~~evihir~~-~~d~~~G~s~i~~~~~~i~~~~~~~~~~~~~f~ng~~~~gil~~~~~~~~~~~~~ 226 (416) T protein:vir:45 148 RIDSNGNNIERNVKFEDMLDIKFY-SLDGINGLSLLDTLSRTIESDNNGKDFLNNFLRNGTHAGGILKMKGVLDNKKARD 226 (416) T ss_pred EecCCCceeEEEEccccEEEeccC-CCCCccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCCcEEEEeCCCCCCHHHHH Confidence 12 22334578999999999965 567899999999999999999999999999999999999999999887 467889 Q ss_pred HHHHHHHHHhcccccccceeecCCCceeEecCCChhHHHHHHHHHHHHHHHHHHhcCChhhcCCccccccccHHHHHHHH Q lcl|Aclame:pro 236 VFRENFESMSSGLQNSHRIALMPVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKATLNNIEQQQQQF 315 (429) Q Consensus 236 ~~~~~~~~~~~g~~~~~~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~fgvp~~~l~~~~~~~~~n~~~~~~~~ 315 (429) ++++.|++.++|..|+|+++|+++|++|++++++++|+||+|.+++++++||++|||||.+|+... .+ ++.+++. .+ T Consensus 227 ~~~~~~~~~~~g~~nag~~~vl~~g~~~~~l~~~~~d~q~~e~~~~~~~~Ia~~fgVPp~~lg~~~-~~-~~~~~~~-~~ 303 (416) T protein:vir:45 227 RAREEFHKSFSGTKQAGKVVVLDESMTFDQLEVDTEVLKLIRENKSSTREIAGVFGIPLHKFGIET-AN-MSITDAN-LD 303 (416) T ss_pred HHHHHHHHHhcCccccCceeecCCCceeEeccCCHHHHHHHHHHHHHHHHHHHHhCCCHHHcCCCC-CC-ccHHHHH-HH Confidence 999999999999999999999999999999999999999999999999999999999999998633 22 3455554 45 Q ss_pred HHHHHhHHHHHHHHHHHHhhccchhhcchhhhhhhhhhHhhhhHHHHHHHHHHHHhCCCCCHHHHHHHhCCCCCCCcc-- Q lcl|Aclame:pro 316 YTDTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEAGGD-- 393 (429) Q Consensus 316 ~~~~l~P~~~~i~~~l~~~ll~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~Gl~~~~~gD-- 393 (429) +..||+|++++|+++|++++++.. .+++++||++.+++.|.+++++.+.+++++|++|+||+|+++|+||+|||| T Consensus 304 ~~~~l~P~~~~ie~~ln~~l~~~~---~~~~~~f~~~~l~~~D~~~~~~~~~~~~~~G~~T~NE~R~~~gl~p~~~gd~~ 380 (416) T protein:vir:45 304 YLSTLKPYITCVCAELNFKFNDEY---VNREFKFDTTEIRVVDEKTQAEIDKINIDSGKMNIDEIRQRDGLAPIPGGNGS 380 (416) T ss_pred HHHHHHHHHHHHHHHHhhhccccc---cCceEEEechhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCcc Confidence 567999999999999999987654 467899999999999999999999999999999999999999999999887 Q ss_pred eeeeccccccccccccccCCCCCCCCCCCCCCCCCC Q lcl|Aclame:pro 394 RLLVNGNMLPIDMAGQAYLKGGDTNGEVSKEGNEGN 429 (429) Q Consensus 394 ~~~~~~n~~~~~~~~~~~~~~g~~~~~~~~~~~~~n 429 (429) ++++++|++|++..++++...... .+.+-+++|.| T Consensus 381 ~~~~~~n~~~~~~~~~~~~~~~~~-~~~~~kgGe~n 415 (416) T protein:vir:45 381 IHRVDLNHVNIELVDEYQMNKSRA-TDKKLKGGEEN 415 (416) T ss_pred eEeecccccccccccccCcccccc-cccccCCCCCC Confidence 688999999999876554433222 22456677777 No 38 >protein:vir:81095 Length: 416 # NCBI annotation: portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:1891 # MgeName: tp310-1 # Cross-refs: genbank:acc:YP_001429872;genbank:gi:156603925;genbank:GeneID:5525315 Probab=100.00 E-value=1.4e-92 Score=524.09 Aligned_cols=408 Identities=23% Similarity=0.348 Sum_probs=339.1 Q ss_pred CchhhhhhcccccccccccccCCchHHHHHhh-c-CCCCcceechhhhhccHHHHHHHHHHHHhhccCceEEEecCCcee Q lcl|Aclame:pro 1 MDSVKKFFNFEKRQTSQVIELNKDDEKLLEWL-G-ISPSTISVKGKNALKVATVFACIKILSESVSKLPLKIYQEDEYGI 78 (429) Q Consensus 1 Mg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~~ 78 (429) ||||.++. ++.... ...+...+...+ + ...+...++...|+++++||+||++||+++|++||++++.++ T Consensus 1 Mg~f~~~~---~r~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~v~~cv~~Ia~~iA~~p~~~~~~~~--- 71 (416) T protein:vir:81 1 MGIFYKNE---KRDLQY---NEDDLQMMVQTLPGFQGTKLRQYKDIEAIRHSDIFTAVMMIASDLARMPIRVTVNGQ--- 71 (416) T ss_pred CCcccccc---cccccC---CCcchhHHHHHhccccccCccccchhhhhcchHHHHHHHHHHHhhccCceEEecCcc--- Confidence 99987542 222211 112223333322 2 233555688889999999999999999999999999986443 Q ss_pred eeeecchhhhhhcccCcCCCCHHHHHHHHHHHHHhhCCeEEEEeeCCCCceEEEEeeCCcceEEEEcCCcceeeeeeEEE Q lcl|Aclame:pro 79 QRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVYIDDVGLLNSKTKMWY 158 (429) Q Consensus 79 ~~~~~~~~~~~l~~~PN~~~s~~~~~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~l~p~~v~~~~~~~~~~~~~~~~~~ 158 (429) ....|+++++|+.+||++||+++||+.++.+++++||||++++++..|++.+|||++|+.|++..+.++...+. ++ T Consensus 72 -~~~~~~~~~lL~~~PN~~~t~~~f~~~~~~~lll~Gna~~~i~r~~~G~~~~L~~i~~~~v~v~~~~~g~~~~~---~~ 147 (416) T protein:vir:81 72 -INYSDRIVNLLNTRPNPMYNGYIFKLVVFVSALLTSHGYIEITRDKTGEPMNLTFRKTSEIELKSDARGRLYYF---HQ 147 (416) T ss_pred -ccccchHHHHHhcccccCCCHHHHHHHHHHHHhhcCCeEEEEEECCCCcEEEEEEEcCceeEEEECCCccEEEE---EE Confidence 34568999999999999999999999999999999999999999999999999999999999998876443221 11 Q ss_pred ee--cccCceEEEccceEEEeecCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHHccCCcceEEEeCCCC-CHHHHH Q lcl|Aclame:pro 159 VV--NTGGQQRVLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGDL-NEDAKK 235 (429) Q Consensus 159 ~~--~~~g~~~~~~~~evih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~-~~e~~~ 235 (429) .. ...+..+.|++++|||||++ +.++++|+||+.++.+++.++.++++++.++|+||++|+|++++++.. ++++.+ T Consensus 148 ~~~~~~~~~~~~~~~~evihir~~-~~d~~~G~s~i~~~~~~i~~~~~~~~~~~~~f~ng~~~~gil~~~~~~~~~~~~~ 226 (416) T protein:vir:81 148 RIDSNGNNIERNVKFEDMLDIKFY-SLDGINGLSLLDTLSRTIESDNNGKDFLNNFLRNGTHAGGILKMKGVLDNKKARD 226 (416) T ss_pred EecCCCceeEEEEccccEEEeccC-CCCCccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCCcEEEEeCCCCCCHHHHH Confidence 12 22334578999999999965 567899999999999999999999999999999999999999999887 467889 Q ss_pred HHHHHHHHHhcccccccceeecCCCceeEecCCChhHHHHHHHHHHHHHHHHHHhcCChhhcCCccccccccHHHHHHHH Q lcl|Aclame:pro 236 VFRENFESMSSGLQNSHRIALMPVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKATLNNIEQQQQQF 315 (429) Q Consensus 236 ~~~~~~~~~~~g~~~~~~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~fgvp~~~l~~~~~~~~~n~~~~~~~~ 315 (429) ++++.|++.++|..|+|+++|+++|++|++++++++|+||+|.+++++++||++|||||.+|+... .+ ++.+++. .+ T Consensus 227 ~~~~~~~~~~~g~~nag~~~vl~~g~~~~~l~~~~~d~q~~e~~~~~~~~Ia~~fgVPp~~lg~~~-~~-~~~~~~~-~~ 303 (416) T protein:vir:81 227 RAREEFHKSFSGTKQAGKVVVLDESMTFDQLEVDTEVLKLIRENKSSTREIAGVFGIPLHKFGIET-AN-MSITDAN-LD 303 (416) T ss_pred HHHHHHHHHhcCccccCceeecCCCceeEeccCCHHHHHHHHHHHHHHHHHHHHhCCCHHHcCCCC-CC-ccHHHHH-HH Confidence 999999999999999999999999999999999999999999999999999999999999998633 22 3455554 45 Q ss_pred HHHHHhHHHHHHHHHHHHhhccchhhcchhhhhhhhhhHhhhhHHHHHHHHHHHHhCCCCCHHHHHHHhCCCCCCCcc-- Q lcl|Aclame:pro 316 YTDTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEAGGD-- 393 (429) Q Consensus 316 ~~~~l~P~~~~i~~~l~~~ll~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~Gl~~~~~gD-- 393 (429) +..||+|++++|+++|++++++.. .+++++||++.+++.|.+++++.+.+++++|++|+||+|+++|+||+|||| T Consensus 304 ~~~~l~P~~~~ie~~ln~~l~~~~---~~~~~~f~~~~l~~~D~~~~~~~~~~~~~~G~~T~NE~R~~~gl~p~~~gd~~ 380 (416) T protein:vir:81 304 YLSTLKPYITCVCAELNFKFNDEY---VNREFKFDTTEIRVVDEKTQAEIDKINIDSGKMNIDEIRQRDGLAPIPGGNGS 380 (416) T ss_pred HHHHHHHHHHHHHHHHhhhccccc---cCceEEEechhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCcc Confidence 567999999999999999987654 467899999999999999999999999999999999999999999999887 Q ss_pred eeeeccccccccccccccCCCCCCCCCCCCCCCCCC Q lcl|Aclame:pro 394 RLLVNGNMLPIDMAGQAYLKGGDTNGEVSKEGNEGN 429 (429) Q Consensus 394 ~~~~~~n~~~~~~~~~~~~~~g~~~~~~~~~~~~~n 429 (429) ++++++|++|++..++++...... .+.+-+++|.| T Consensus 381 ~~~~~~n~~~~~~~~~~~~~~~~~-~~~~~kgGe~n 415 (416) T protein:vir:81 381 IHRVDLNHVNIELVDEYQMNKSRA-TDKKLKGGEEN 415 (416) T ss_pred eEeecccccccccccccCcccccc-cccccCCCCCC Confidence 688999999999876554433222 22456677777 No 39 >protein:vir:3868 Length: 417 # NCBI annotation: putative portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:82 # MgeName: A2 # Cross-refs: genbank:acc:NP_680485;swissprot:trembl:q8ltc2;genbank:gi:22296525;interpro:IPR006427;interpro:IPR006944;uniprot:Q8LTC2;genbank:GeneID:951699 Probab=100.00 E-value=1.5e-92 Score=523.95 Aligned_cols=404 Identities=21% Similarity=0.280 Sum_probs=337.2 Q ss_pred CchhhhhhcccccccccccccCCchHHHHH-hhcCCCCcceechhhhhccHHHHHHHHHHHHhhccCceEEEecCCceee Q lcl|Aclame:pro 1 MDSVKKFFNFEKRQTSQVIELNKDDEKLLE-WLGISPSTISVKGKNALKVATVFACIKILSESVSKLPLKIYQEDEYGIQ 79 (429) Q Consensus 1 Mg~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~~~ 79 (429) |++|++... ... + .+...+.. ....+... .++...||++++||+||++||+.||++|+++++.+.++.. T Consensus 1 m~~~~~~~~-~~~----~----~~~~~~~~~~~~~~~~g-~~~~~~Al~~~~V~~cv~~ia~~iA~lp~~~~~~~~~~~~ 70 (417) T protein:vir:38 1 MKLFRGLAT-EVD----P----HWADHLLDSGVIPSFRG-GYLGISALRNSDVLTAVSIVSGDVSRFPLVITDSSTDEVI 70 (417) T ss_pred Ccccccccc-CCC----c----cchhhhcccccccccCC-ceechhhcccHHHHHHHHHHHHhhccCeeEEEEcCCccee Confidence 999753211 110 0 01111111 11111112 2334579999999999999999999999999998877643 Q ss_pred eeecchhhhhhcccCcCCCCHHHHHHHHHHHHHhhCCeEEEEeeCCC-CceEEEEeeCCcceEEEEcCCcceeeeeeEEE Q lcl|Aclame:pro 80 RGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRK-GKVQALWPIDASKVTVYIDDVGLLNSKTKMWY 158 (429) Q Consensus 80 ~~~~~~~~~~l~~~PN~~~s~~~~~~~~~~~~l~~G~~~~~~~~~~~-g~~~~l~~l~p~~v~~~~~~~~~~~~~~~~~~ 158 (429) ..|+++++|+.+||++||+++||+.++.+++++||+|++++|+.. |.+.+|||++|+.|++..+..+. ..+.+ T Consensus 71 --~~~~~~~lL~~~PN~~~t~~~f~~~~~~~lll~Gn~y~~i~r~~~g~~~~~l~~l~p~~v~v~~~~~~~----~~y~~ 144 (417) T protein:vir:38 71 --DLANIEYLMNTKVNKRLSAYQWKFPMMVNAILTGNAYSRIVRDPITNEPAMFEFYAPSQTQVDTSDPDN----IIYRF 144 (417) T ss_pred --ccchHHHHHhcccCcCCCHHHHHHHHHHHHhhcCCeEEEEEEcCCCCEEEEEEEeCCceEEEEEcCCCe----EEEEE Confidence 358999999999999999999999999999999999999999864 67999999999999998765432 22223 Q ss_pred eecccCceEEEccceEEEeecCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHHccCCcceEEEeCCCCCHHHHHHHH Q lcl|Aclame:pro 159 VVNTGGQQRVLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGDLNEDAKKVFR 238 (429) Q Consensus 159 ~~~~~g~~~~~~~~evih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~~e~~~~~~ 238 (429) ....++..+.++++||||||++ +.++++|+||+.++..++.++.+++++..++|+||++|+|+++.+..+++++.++++ T Consensus 145 ~~~~~~~~~~~~~~dviH~r~~-~~d~~~G~s~l~~~~~~i~~~~~~~~~~~~~f~ng~~p~~il~~~~~l~~e~~~~~~ 223 (417) T protein:vir:38 145 TPYNSSMQKVCGFEDVIHWKFF-SYDTIMGRSPLLSLGDEIGLQESGVSTLQKFFKSGLKGSIIKAKESRLSAEARQKIR 223 (417) T ss_pred EEcCCcEEEEecCcceEEecCC-CCCCccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCCcEEEEeCCCCCHHHHHHHH Confidence 3334455677999999999965 567889999999999999999999999999999999999999999999999999999 Q ss_pred HHHHHHhcccccccceeecCCCceeEecCCChhHHHHHHHHHHHHHHHHHHhcCChhhcCCccccccccHHHHHHHHHHH Q lcl|Aclame:pro 239 ENFESMSSGLQNSHRIALMPVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKATLNNIEQQQQQFYTD 318 (429) Q Consensus 239 ~~~~~~~~g~~~~~~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~fgvp~~~l~~~~~~~~~n~~~~~~~~~~~ 318 (429) ++|++.++|. |+|+++|+++|++|+++++++.|+||+|.+++++++||++|||||.+||. .++++|.+++.++|+++ T Consensus 224 ~~~~~~~~g~-n~g~~~vl~~g~~~~~l~~~~~d~q~le~~~~~~~~Ia~~fgVPp~~lg~--~~~~s~~e~~~~~~~~~ 300 (417) T protein:vir:38 224 EDFERAQAGA-DAGSPIIVDATMDYQPLEVDTNVLNLINSNNYSTAQIAKALRVPAYRLAQ--NSPNQSVKQLADDYIRN 300 (417) T ss_pred HHHHHHhccc-ccCCceeccCCceEEEccCCHHHHHHHHHHHhhHHHHHHHhCCCHHHhCC--CCcchhHHHHHHHHHHH Confidence 9999999885 89999999999999999999999999999999999999999999999974 56899999999999999 Q ss_pred HHhHHHHHHHHHHHHhhccchhhcchhhhhhhhhhHhhhhHHHHHHHHHHHHhCCCCCHHHHHHHhCCCCCCCc--ceee Q lcl|Aclame:pro 319 TLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEAGG--DRLL 396 (429) Q Consensus 319 ~l~P~~~~i~~~l~~~ll~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~Gl~~~~~g--D~~~ 396 (429) ||.|+++.|+++|+++||++.+. .+++++||++.+.+.+. ..+++++++|++|+||+|+++|+||+||| |+++ T Consensus 301 tl~P~~~~ie~~l~~~Ll~~~~~-~~~~~~fd~~~l~~~~~----~~~~~~~~~G~~T~NE~R~~~gl~pi~~g~~d~~~ 375 (417) T protein:vir:38 301 DLPFYFEPITSEFELKLLDDAQR-HQYCIGFDTKSVNGLPI----ADVNTAVNGGLWTGNEGRAELGKKPLKDPNMDRIQ 375 (417) T ss_pred HHHHHHHHHHHHHHhhhcChhhc-ccceEEechhhhhHHHH----HHHHHHHhCCCcCHHHHHHHhCCCCCCCCCCCeee Confidence 99999999999999999988765 46899999988765443 33677899999999999999999999876 8899 Q ss_pred eccccccccccccc------cCCCCCCCCCCCCCCCCCC Q lcl|Aclame:pro 397 VNGNMLPIDMAGQA------YLKGGDTNGEVSKEGNEGN 429 (429) Q Consensus 397 ~~~n~~~~~~~~~~------~~~~g~~~~~~~~~~~~~n 429 (429) +|+|++|++..++. ..+||+.+.++.+++++.| T Consensus 376 ~~~n~~~~d~~~~~~~~~~~~~kgg~~~~~~~~~~~~~~ 414 (417) T protein:vir:38 376 STLNTVFLDQKEAYQAEHAAELKGGDTNAKGNQNGSGTN 414 (417) T ss_pred ecccccccccccccccccccccCCCCCCCCCCCcCCCCc Confidence 99999999876553 4478888888777666666 No 40 >protein:vir:81218 Length: 423 # NCBI annotation: gp3, phage portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:1893 # MgeName: BFK20 # Cross-refs: genbank:acc:YP_001456733;genbank:gi:157168376;interpro:IPR006427;interpro:IPR006944;uniprot:Q9MBK2;genbank:GeneID:5580341 Probab=100.00 E-value=2.3e-92 Score=523.01 Aligned_cols=409 Identities=18% Similarity=0.212 Sum_probs=337.8 Q ss_pred CchhhhhhcccccccccccccCCchHHHHH--hhcCCCCcceechh-hhhccHHHHHHHHHHHHhhccCceEEEecCCce Q lcl|Aclame:pro 1 MDSVKKFFNFEKRQTSQVIELNKDDEKLLE--WLGISPSTISVKGK-NALKVATVFACIKILSESVSKLPLKIYQEDEYG 77 (429) Q Consensus 1 Mg~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~-~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~ 77 (429) ||||++++....... .+... .+.+ ..+.+.+...++.. .+.++|+|++||++||+.||++|+++++++++| T Consensus 1 Mg~~~~~~~~~~~~~-~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~i~~ia~~ia~lp~~~~~~~~dg 74 (423) T protein:vir:81 1 MGFLQKLGLAPSVVA-TPEPI-----ELVGPIFESLKLSTKNMTVEQIWEDQPHLRTVTTFIARNVASLQLQAFERVEDG 74 (423) T ss_pred CchhHhhcccccccc-Ccccc-----ccccccccccccccchhhHHHHHHhhhHHHHHHHHHHHhHhhCceEEEEEecCC Confidence 999999853221111 11111 1111 11222233333333 446799999999999999999999999887666 Q ss_pred e-eeeecchhhhhhcccCcCCCCHHHHHHHHHHHHHhhCCeEEEEeeCC--CCceEEEEeeCCcceEEEEcCCcceeeee Q lcl|Aclame:pro 78 I-QRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDR--KGKVQALWPIDASKVTVYIDDVGLLNSKT 154 (429) Q Consensus 78 ~-~~~~~~~~~~~l~~~PN~~~s~~~~~~~~~~~~l~~G~~~~~~~~~~--~g~~~~l~~l~p~~v~~~~~~~~~~~~~~ 154 (429) . .....|+++.+|. +||++||+++||+.++.+++++||+|+++.++. .+....|+|++++.|++....+......+ T Consensus 75 ~~~~~~~~~~~~ll~-~PN~~~t~~~f~~~~~~~l~l~Gna~~~i~rd~~~~~~~~~l~p~~~~~v~~~~~~~~~~~~~Y 153 (423) T protein:vir:81 75 GRERVREGHLARVCK-LANSDMTMYDLLERTMFDLCLYDEFFWLLPGDLGVDTPTLDIRPIPVSWVQRRAYKDGWGSLDY 153 (423) T ss_pred ceeeeccchHHHHhh-cCCCCCCHHHHHHHHHHHHhhcCCeEEEEEecCCcCcceEEEeecccceeeeeeccCCCcceEE Confidence 4 4456788888886 899999999999999999999999999998875 34567888888888887665544333333 Q ss_pred eEEEeecccCceEEEccceEEEeecCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHHccCCcceEEEeCC-----CC Q lcl|Aclame:pro 155 KMWYVVNTGGQQRVLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVG-----DL 229 (429) Q Consensus 155 ~~~~~~~~~g~~~~~~~~evih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~-----~~ 229 (429) ........+|....+++++|||+|.+++.+..+|+||+.++..++....+++++..++|+||++|+|+++.+. .+ T Consensus 154 ~~~~~~~~~g~~~~~~~~evih~r~~~~~~~~~G~spi~~~~~~i~~~~~~~~~~~~~f~ng~~p~gvi~~~~~~~~~~l 233 (423) T protein:vir:81 154 IIIESGDNDGRSVKVPGERVIHRHGYNPKTMKRGKSPVQSLRDILGEQIEAAIFRAQMWRNGPRPGMVIMRDPESKAGKW 233 (423) T ss_pred EEEEecCCCceEEEEcccceEEecCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEecCcccCccC Confidence 3333444678888999999999998888888899999999999999999999999999999999999998764 46 Q ss_pred CHHHHHHHHHHHHHHhc-ccccccceeecCCCceeEecCCChhHHHHHHHHHHHHHHHHHHhcCChhhcCCccccccccH Q lcl|Aclame:pro 230 NEDAKKVFRENFESMSS-GLQNSHRIALMPVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKATLNNI 308 (429) Q Consensus 230 ~~e~~~~~~~~~~~~~~-g~~~~~~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~fgvp~~~l~~~~~~~~~n~ 308 (429) ++|+.++++++|++.+. +..++|+++||++|++|++++++++|+||+|.+++++++||++|||||.+||..+.++|+|. T Consensus 234 ~~e~~~~~~~~~~~~~~~~~~n~g~~~vl~~g~~~~~l~~s~~d~q~~e~~~~~~~eIa~~fgVPp~~lg~~~~~t~sn~ 313 (423) T protein:vir:81 234 DAESRTRFMANLRASFSPKSSDVGGTLLLEDGMKAENFHTTSKDEQTVETTKLSLQTVAQVYGINPTMVGQLDNANYSNV 313 (423) T ss_pred CHHHHHHHHHHHHHHhccccccCCcceecCCCceEEeccCChhhHHHHHHHHhhHHHHHHHhCCCHHHhcCCCCCCcccH Confidence 89999999999999984 67789999999999999999999999999999999999999999999999999889999999 Q ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHhhccchhh-cchhhhhhhhhhHhhhhHHHHHHHHHHHHh-CCCCCHHHHHHHhCC Q lcl|Aclame:pro 309 EQQQQQFYTDTLQATLTMYEQEMTYKLFLDSEL-DKGFYSKFNVDAILRADIKTRYEAYRTGIQ-GGFLKPNEARSKEDL 386 (429) Q Consensus 309 ~~~~~~~~~~~l~P~~~~i~~~l~~~ll~~~~~-~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~-~g~~t~NE~R~~~Gl 386 (429) |++.+.|+++||.|++..||++|+++|+++.+. ..+++++||.+++++.|.+++++.+.+++. +|++|+||+|+++|+ T Consensus 314 e~~~~~f~~~~L~P~~~~ie~~l~~~L~~~~~~~~~~~~~~fd~~~llr~d~~~r~~~~~~~l~~~G~~T~NE~R~~~gl 393 (423) T protein:vir:81 314 REFRKALYGDNLGSWIRIIQDVMNLFLLPRVGIDNEKFYFEFNLEEKLRASFEEAAEIKRAAVGNVAWMTINEVRAMDNL 393 (423) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhcCccccccCccEEEecchhhhccCHHHHHHHHHHHHhCCCCcCHHHHHHHhCC Confidence 999999999999999999999999999988765 467899999999999999999999999884 699999999999999 Q ss_pred CCCCCcceeeeccccccccccccccCCCCCCCCC Q lcl|Aclame:pro 387 PPEAGGDRLLVNGNMLPIDMAGQAYLKGGDTNGE 420 (429) Q Consensus 387 ~~~~~gD~~~~~~n~~~~~~~~~~~~~~g~~~~~ 420 (429) ||+||||++++|.|+.+.+... +++++.+. T Consensus 394 ~p~~gGD~~~~p~n~~~~~~~~----~~~~~~~t 423 (423) T protein:vir:81 394 PSIDGGDDLARPLNTEFGDSED----APGEEVET 423 (423) T ss_pred CCCCCcceeecccccccCccCC----CCCCCCCC Confidence 9999999999999987755321 11111111 No 41 >protein:vir:9702 Length: 406 # NCBI annotation: hypothetical protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:174 # MgeName: 315.2 # Cross-refs: genbank:acc:NP_795464;genbank:gi:28876227;genbank:GeneID:1257772 Probab=100.00 E-value=2.8e-90 Score=511.57 Aligned_cols=397 Identities=18% Similarity=0.215 Sum_probs=334.3 Q ss_pred CchhhhhhcccccccccccccCCchHHHHHhhcCCCCcceechhhhhccHHHHHHHHHHHHhhccCceEEEecCCceeee Q lcl|Aclame:pro 1 MDSVKKFFNFEKRQTSQVIELNKDDEKLLEWLGISPSTISVKGKNALKVATVFACIKILSESVSKLPLKIYQEDEYGIQR 80 (429) Q Consensus 1 Mg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~~~~ 80 (429) ||||++.. .. . ....+.+..+++...+ ..++...|+++++||+||++||++||++|+++++++++ . T Consensus 1 m~~f~~~~-----~~--~---~~~~~~~~~~~~~~~~-~~~~~~~Al~~~~V~~~i~~Ia~~iA~lp~~~~~~~g~---~ 66 (406) T protein:vir:97 1 MSFFQPLG-----TS--K---VSYDDYISSVLAGDVS-QKYLGVSALKNSDILTATSIIAGDIARFPLVKKDVNGD---I 66 (406) T ss_pred CccccccC-----CC--C---CCcchHHHHHhcCCCC-cccccchhhccHHHHHHHHHHHHhhhhCeeEEEecCcc---c Confidence 99986421 11 1 1223445566654433 34555679999999999999999999999998876653 3 Q ss_pred eecchhhhhhcccCcCCCCHHHHHHHHHHHHHhhCCeEEEEeeCC-CCceEEEEeeCCcceEEEEcCCcceeeeeeEEEe Q lcl|Aclame:pro 81 GTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDR-KGKVQALWPIDASKVTVYIDDVGLLNSKTKMWYV 159 (429) Q Consensus 81 ~~~~~~~~~l~~~PN~~~s~~~~~~~~~~~~l~~G~~~~~~~~~~-~g~~~~l~~l~p~~v~~~~~~~~~~~~~~~~~~~ 159 (429) ...|+++++|+.+||++||+++||+.++.+|+++||+|+++.|+. .|.+.+|||++|+.|++..++++.. .+.+. T Consensus 67 ~~~~~~~~lL~~~PN~~~t~~~f~~~~~~~l~l~Gnay~~i~r~~~~g~~~~L~~i~p~~v~v~~~~~~~~----~y~~~ 142 (406) T protein:vir:97 67 IHDEDINYLLNVKSTSNASARTWKFAMAVNAILTGNSFSRILRDPKTNQALQFQFYRPSETTVEETDNHEI----VYTFT 142 (406) T ss_pred cccchHHHHhhccCCCCCCHHHHHHHHHHHHhhcCCeEEEEEecCCCCeEEEEEEECCCeeEEEEcCCceE----EEEEE Confidence 446899999999999999999999999999999999999999985 6899999999999999987764322 22344 Q ss_pred ecccCceEEEccceEEEeecCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHHccCCcceEEEeCCCCCHHHHHHHHH Q lcl|Aclame:pro 160 VNTGGQQRVLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGDLNEDAKKVFRE 239 (429) Q Consensus 160 ~~~~g~~~~~~~~evih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~~e~~~~~~~ 239 (429) ...+|..+.++++||||||++ +.++++|+||+.++..++.++.+++++..++|+||+.+++++..+..+++++.+++++ T Consensus 143 ~~~~~~~~~~~~~evih~r~~-~~dg~~G~spi~~~~~~i~~~~a~~~~~~~~f~ng~~~~~i~~~~~~l~~e~~~~~~~ 221 (406) T protein:vir:97 143 DMLTAKQVKCFAHDVIHWKFF-SHDTILGRSPLLSLGDEIDLQTGGINTLIKFFKDGFSSGILTMKGAQLSGDARQRARQ 221 (406) T ss_pred ecCCceEEEEccccEEEecCC-CCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEecCCCCCHHHHHHHHH Confidence 456778889999999999954 5677889999999999999999999999999999999999999999999999999999 Q ss_pred HHHHHhcccccccceeecCCCceeEecCCChhHHHHHHHHHHHHHHHHHHhcCChhhcCCccccccccHHHHHHHHHHHH Q lcl|Aclame:pro 240 NFESMSSGLQNSHRIALMPVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKATLNNIEQQQQQFYTDT 319 (429) Q Consensus 240 ~~~~~~~g~~~~~~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~fgvp~~~l~~~~~~~~~n~~~~~~~~~~~~ 319 (429) +|++.++| .|+|+++|+++|++|+++++++.|+|++|.+++++++||++|||||.+||. .++++|.+++.+.|++.| T Consensus 222 ~~~~~~~g-~n~g~~~vl~~g~~~~~l~~~~~d~q~le~~~~~~~~Ia~afgVPp~~lg~--~~~~~~~e~~~~~f~~~~ 298 (406) T protein:vir:97 222 EFEKMREG-SVGGSPLVFDSTMEYTPLEIDTNVLQLITSNNFSTAQIAKALRVPSYKLGV--NSPNQSVAQLMEDYVTND 298 (406) T ss_pred HHHHHhcc-cccCceeecCCCceEEEccCCHHHHHHHHHHHhhHHHHHHHhCCCHHHcCC--CCCcchHHHHHHHHHHHH Confidence 99999988 588999999999999999999999999999999999999999999999985 456889999999999999 Q ss_pred HhHHHHHHHHHHHHhhccchhhcchhhhhhhhhhHhhhhHHHHHHHHHHHHhCCCCCHHHHHHHhCCCCCCC--cceeee Q lcl|Aclame:pro 320 LQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEAG--GDRLLV 397 (429) Q Consensus 320 l~P~~~~i~~~l~~~ll~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~Gl~~~~~--gD~~~~ 397 (429) |.|++++||++|+++|+++.+. .+++++||++.+ .+.+++.+.+++++|++|+||+|+++|+||+++ ||++++ T Consensus 299 l~P~~~~ie~~l~~kll~~~~~-~~~~i~fd~~~~----~~~~~~~~~~~~~~g~~T~NE~R~~~g~~p~~~~~gD~~~~ 373 (406) T protein:vir:97 299 LPFYFDAITSELGLKTLNDKDR-RLYHIEFDTRSV----TGRNVDEIVKLVNNQILTPNQGLVELGKQKSTDPNMDRYQS 373 (406) T ss_pred HHHHHHHHHHHHhhhhcChhhc-cceeEEEecCcc----chhhHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCCCeEee Confidence 9999999999999999988664 568899987654 455567788899999999999999999999965 999999 Q ss_pred ccccccccccccccCC------CCCCCCCCCCC Q lcl|Aclame:pro 398 NGNMLPIDMAGQAYLK------GGDTNGEVSKE 424 (429) Q Consensus 398 ~~n~~~~~~~~~~~~~------~g~~~~~~~~~ 424 (429) |+|++|++...+++.. ||++++++.+. T Consensus 374 ~~n~~~~~~~~~~~~~~~~~~~gg~~~~~~~~~ 406 (406) T protein:vir:97 374 SLNYVFLDKKEEYQDKVGIKGKGGEVNAEEDKS 406 (406) T ss_pred ccCccchhcccccccccccccCCCCCCCCCCCC Confidence 9999999887654432 22222222221 No 42 >protein:vir:101647 Length: 460 # NCBI annotation: phage portal protein # Family: family:all:26542 # MgeID: mge:1646 # MgeName: 11b # Cross-refs: genbank:acc:YP_112492;genbank:gi:53793592;uniprot:Q5ZGG1;genbank:GeneID:3101755 Probab=100.00 E-value=2.3e-90 Score=512.04 Aligned_cols=410 Identities=15% Similarity=0.193 Sum_probs=342.3 Q ss_pred CchhhhhhcccccccccccccCCchHHHHHhhcCCC-----CcceechhhhhccHHHHHHHHHHHHhhccCceEEEecCC Q lcl|Aclame:pro 1 MDSVKKFFNFEKRQTSQVIELNKDDEKLLEWLGISP-----STISVKGKNALKVATVFACIKILSESVSKLPLKIYQEDE 75 (429) Q Consensus 1 Mg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~ 75 (429) =+++.|+++ +.+... ....+.++.++|... +...++...|+++|+||+||++||++||++||++++.+. T Consensus 2 ~~~~~~~~~---~~~~~~---~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~v~~~v~~ia~~iA~lp~~v~~~~~ 75 (460) T protein:vir:10 2 ANRIIRALR---ELTGLD---NKFNDAFIKYIGQTFTKYDNNGKTYLEQGYNINPDVYSCISQMAAKTVAVPYTIKVVKD 75 (460) T ss_pred chhHHHHHh---hhhccC---CCchHHHHHhhccccCCCccchhhhhHHHHhcchHHHHHHHHHHHhhhhCceEEEeccC Confidence 233455442 222111 123345667777543 334467778999999999999999999999999999887 Q ss_pred ceeee---------------------------eecchhhhhhcccCcCCCCHHHHHHHHHHHHHhhCCeEEEEeeCC--- Q lcl|Aclame:pro 76 YGIQR---------------------------GTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDR--- 125 (429) Q Consensus 76 ~~~~~---------------------------~~~~~~~~~l~~~PN~~~s~~~~~~~~~~~~l~~G~~~~~~~~~~--- 125 (429) ++... ...+++..+|+.+||++||+++||+.++.+++++||||++++|+. T Consensus 76 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~PN~~~t~~~f~~~~~~~lll~Gnay~~i~r~~~~~ 155 (460) T protein:vir:10 76 TKAYQQLNNLNISTKGLYSFTQSLQKNRLDTKAFSETEKAFPLESPNPTQTWADIYSLYKTYMRLNGNCYFYLMSPDDGI 155 (460) T ss_pred CccchhhhhhhhhhhhhHHHHHHhhcchhhhcccchhHHHHHHhCCCCCCCHHHHHHHHHHHHhhcCCeEEEEEecCCCc Confidence 76422 223455667778999999999999999999999999999999964 Q ss_pred -CCceEEEEeeCCcceEEEEcCCcceee--eeeEEEeecccCceEEEccceEEEeecCCCC-----CcccccCHHHHHHH Q lcl|Aclame:pro 126 -KGKVQALWPIDASKVTVYIDDVGLLNS--KTKMWYVVNTGGQQRVLKPEEILHFKNGITL-----DGLVGVPTMEYLKS 197 (429) Q Consensus 126 -~g~~~~l~~l~p~~v~~~~~~~~~~~~--~~~~~~~~~~~g~~~~~~~~evih~~~~~~~-----~~~~G~s~~~~~~~ 197 (429) .|++.+||||+|+.|++..+.+..... .....|.+..+|..+.|+++||||||++++. ++.+|+||+.++.. T Consensus 156 ~~G~~~~L~~l~~~~v~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~evih~r~~~~~~~~~~~~~~G~sp~~~~~~ 235 (460) T protein:vir:10 156 NAGVPSQMYVLPAHLIKIVLKDDINLLSTDSPIKSYMLIQGDQFIEFNEDEVIHTKYANPNFDLQGSHLYGMSPIRAILR 235 (460) T ss_pred cCceeEEEEEEcCceEEEEEcCCCceeeeeeeeeEEEEecCceeEEecccceEEEecCCCCcccccCccccccHHHHHHH Confidence 478999999999999999887654322 2334455667788899999999999987766 35789999999999 Q ss_pred HHHHHHHHHHHHHHHHHccCCcceEEEeCCCCCHHHHHHHHHHHHHHhcccccccceeecCCCceeEecCCChhHHHHHH Q lcl|Aclame:pro 198 TLENSASADKFINNFYKQGLQVKGLVQYVGDLNEDAKKVFRENFESMSSGLQNSHRIALMPVGYQFQPISLNMSDAQFLE 277 (429) Q Consensus 198 ~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~g~~~~~~~~vl~~g~~~~~~~~~~~d~~~~e 277 (429) .+....+++++..++|+||+.|+++++.+..+++++.+++++.|++.++|.+|+|+++++++|++|+++++++.|+|++| T Consensus 236 ~i~~~~~~~~~~~~~f~ng~~~~~i~~~~~~l~~e~~~~~~~~~~~~~~g~~n~g~~~vl~~g~~~~~l~~~~~d~q~~e 315 (460) T protein:vir:10 236 NINSQNSTIDNNVKTMQNGGVFGFIHGGSTGLTQPQADSLKQRLTEMDKSPDRLSQIAGASGEIAFTKISLNTDELKPFD 315 (460) T ss_pred HHHHHHHHHHHHHHHHhcCCCcceeeecCCCCCHHHHHHHHHHHHHHhcCccccCCceecCCCceEEEccCChhHHHHHH Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred HHHHHHHHHHHHhcCChhhcCCccc--cccccHHHHHHHHHHHHHhHHHHHHHHHHHHhhccchhhcchhhhhhhhhhH- Q lcl|Aclame:pro 278 NTELTIRQIATAFGIKMHQLNDLSK--ATLNNIEQQQQQFYTDTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAI- 354 (429) Q Consensus 278 ~~~~~~~~Ia~~fgvp~~~l~~~~~--~~~~n~~~~~~~~~~~~l~P~~~~i~~~l~~~ll~~~~~~~~~~~~fd~~~l- 354 (429) .+++.+++||++|||||.+||..+. .+++|.+++.+.|++.||.|++..||++|+++|+++.+...+++++||++.+ T Consensus 316 ~~~~~~~~Ia~~fgVPp~~lg~~~~~t~~~sn~e~~~~~f~~~~l~P~~~~ie~~ln~kl~~~~~~~~~~~i~~d~~~l~ 395 (460) T protein:vir:10 316 YLKYDQKAICNALGWSDKLLNNNEGGGLNTGNLEEERKRVVTDNIQPDLVILKQAFDKKFIKRFKGYENAVIEWDISELP 395 (460) T ss_pred HHHHHHHHHHHHhCCCHHHhCCCCCCCCccccHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcccccCCceEEeecchhh Confidence 9999999999999999999997654 4789999999999999999999999999999999998888899999999887 Q ss_pred -hhhhHHHHHHHHHHHHhCCCCCHHHHHHHhCCCCC--CCcceeeeccccccccccccccCCCCCCCCC Q lcl|Aclame:pro 355 -LRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPE--AGGDRLLVNGNMLPIDMAGQAYLKGGDTNGE 420 (429) Q Consensus 355 -~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~Gl~~~--~~gD~~~~~~n~~~~~~~~~~~~~~g~~~~~ 420 (429) ++.+.++ ...++++|++|+||+|+++|+||+ +|||++++|+|++|++..++....++++.++ T Consensus 396 ~l~~d~~~----~~~~~~~g~~T~NE~R~~~g~~pi~~~~gD~~~~~~n~~~~~~~~~~~~~~~~nq~~ 460 (460) T protein:vir:10 396 EMQTDMVA----MASWLNTIPVTPNEIRIAMKYETLNQDGMDIVFMPSNKVRIDDVSNNLIDSAFNQNQ 460 (460) T ss_pred hHHHHHHH----HHHHHhCCCCCHHHHHHHhCCCCCCCCCCCeeeecccccchhhcccccCCCcccCCC Confidence 4444444 345778999999999999999998 5899999999999998765433332222222 No 43 >protein:vir:95378 Length: 406 # NCBI annotation: phage portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:1567 # MgeName: GBSV1 # Cross-refs: genbank:acc:YP_764474;genbank:gi:115334628;genbank:GeneID:5179265 Probab=100.00 E-value=4.7e-89 Score=504.83 Aligned_cols=399 Identities=20% Similarity=0.244 Sum_probs=339.7 Q ss_pred CchhhhhhcccccccccccccCCchHHHHHh-hcCCCCcceechhhhhccHHHHHHHHHHHHhhccCceEEEecCCceee Q lcl|Aclame:pro 1 MDSVKKFFNFEKRQTSQVIELNKDDEKLLEW-LGISPSTISVKGKNALKVATVFACIKILSESVSKLPLKIYQEDEYGIQ 79 (429) Q Consensus 1 Mg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~~~ 79 (429) ||||++|++++++...... . ....-+ .+...+...++...++++++|++||++||+.||++||++++.++++. T Consensus 1 Mg~f~~~~~~~~~~~~~~~--~---~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~~- 74 (406) T protein:vir:95 1 MGLFDRWRRTKRKSKIRAD--T---GYVGLFMSGEDVSFLVPGYVRLSDNPEVRMAVHKIADLISSMTIYLMQNTEDGD- 74 (406) T ss_pred Ccchhhhcccccccccccc--c---hhhhhhccCcccCccccCHHHHhhcHHHHHHHHHHHHhhccCceEEEEecCCcc- Confidence 9999998765554432221 1 111112 23344555677788999999999999999999999999999987764 Q ss_pred eeecchhhhhhcccCcCCCCHHHHHHHHHHHHHhhCCe--EEEEeeCCCCceEEEEeeCCcceEEEEcCCcceeeeeeEE Q lcl|Aclame:pro 80 RGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNS--YANIEFDRKGKVQALWPIDASKVTVYIDDVGLLNSKTKMW 157 (429) Q Consensus 80 ~~~~~~~~~~l~~~PN~~~s~~~~~~~~~~~~l~~G~~--~~~~~~~~~g~~~~l~~l~p~~v~~~~~~~~~~~~~~~~~ 157 (429) ....|+++++|+.+||++||+++||+.++.+++++|++ |+++.++..|.+.+|||++|++|++..+.++ T Consensus 75 ~~~~~~~~~~l~~~PN~~~t~~~f~~~~~~~~ll~g~g~a~~~~~~~~~g~~~~l~~i~~~~v~~~~~~~~--------- 145 (406) T protein:vir:95 75 IRIRNELSRKIDITPYSLMTRKSWMYNIVYTMLLDGEGNSVVFPKYTADGLIDELVPLTPSKVNFLDTPDG--------- 145 (406) T ss_pred eeecchHHHHHhhccCCCCCHHHHHHHHHHHHHhcCCceEEEEEEECCCCcEEEEEEEcCceeEEEEcCCe--------- Confidence 45678999999999999999999999999999998765 6677889999999999999999999887752 Q ss_pred EeecccCceEEEccceEEEeec-CCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHHccCCcceEEEeCCCCCHHHHHH Q lcl|Aclame:pro 158 YVVNTGGQQRVLKPEEILHFKN-GITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGDLNEDAKKV 236 (429) Q Consensus 158 ~~~~~~g~~~~~~~~evih~~~-~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~~e~~~~ 236 (429) |.+..++ +.|+++||||+++ +++.++++|.||+.++..++.+..++.+++.++|+||++|+|+++++..+++++.++ T Consensus 146 ~~~~~~~--~~~~~~evih~~~~~~~~~~~~G~s~i~~~~~~i~~~~~~~~~~~~~~~ng~~~~~il~~~~~l~~e~~~~ 223 (406) T protein:vir:95 146 YQVLYGG--QTFNYDEVLHFIYNPDPERPYIGRGYRVVLKDIADNLKQATATKKSFMSGKYMPSLIVKVDAATAELSSEE 223 (406) T ss_pred EEEEecc--EEEchhHEEEeeccCCCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEeCCCCCHHHHHH Confidence 1112233 4699999999996 477788999999999999999999999999999999999999999999999999999 Q ss_pred HHHHHHHHhcccccccceeecCC-CceeEec-CCChhHHHHHHHHHHHHHHHHHHhcCChhhcCCccccccccHHHHHHH Q lcl|Aclame:pro 237 FRENFESMSSGLQNSHRIALMPV-GYQFQPI-SLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKATLNNIEQQQQQ 314 (429) Q Consensus 237 ~~~~~~~~~~g~~~~~~~~vl~~-g~~~~~~-~~~~~d~~~~e~~~~~~~~Ia~~fgvp~~~l~~~~~~~~~n~~~~~~~ 314 (429) ++++|.+.++|..|+++++|+++ |.+++++ .++++|+|++|.+++++++||++|||||.+||.. ++.+++..+ T Consensus 224 ~~~~~~~~~~g~~n~~~~~v~~~~~~~~~~~~~~~~~d~q~~e~~~~~~~~Ia~~fgVp~~~lg~~-----~~~~~~~~~ 298 (406) T protein:vir:95 224 GRNAVFKKYLQATEAGQPWIIPAELLEVEQVKPLSLKDIAINEAVELDKRTVAGMFGVPAFLLGIG-----EFNRDEYNN 298 (406) T ss_pred HHHHHHHHhccccccCCceeecCCCccccccccCChhHHHHHHHHHHHHHHHHHHhCCCHHHcCCC-----CchHHHHHH Confidence 99999999999999999988864 5667775 4799999999999999999999999999999753 356888999 Q ss_pred HHHHHHhHHHHHHHHHHHHhhccchhhcchhhhhhhhhhHhhhhHHHHHHHHHHHHhCCCCCHHHHHHHhCCCCCCCcce Q lcl|Aclame:pro 315 FYTDTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEAGGDR 394 (429) Q Consensus 315 ~~~~~l~P~~~~i~~~l~~~ll~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~Gl~~~~~gD~ 394 (429) |++.||.|+++.|+++|++++|.+. +++++||++++++.|.+++++.+.+++++|++|+||+|+++|+||+||||+ T Consensus 299 ~~~~~l~P~~~~ie~~l~~~l~~~~----~~~~~fd~~~l~~~d~~~~~~~~~~l~~~G~~t~NE~R~~~gl~p~~~gd~ 374 (406) T protein:vir:95 299 FINSTILPIAKGIEQELTRKLLISP----DLYFKFNPRSLYAYDLKELAEVGSNMYVRGIMEGNEVRDWLGLSPKEGLSE 374 (406) T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCC----CcEEEeechhhhcCCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCcce Confidence 9999999999999999999998764 468999999999999999999999999999999999999999999999999 Q ss_pred eeecccccccccccccc-CCCCCCCCCCCCCC Q lcl|Aclame:pro 395 LLVNGNMLPIDMAGQAY-LKGGDTNGEVSKEG 425 (429) Q Consensus 395 ~~~~~n~~~~~~~~~~~-~~~g~~~~~~~~~~ 425 (429) +++|+|++|++..++.+ .++|++++++.++. T Consensus 375 ~~~~~n~~~~~~~~~~~~~k~g~~~~~~~~~~ 406 (406) T protein:vir:95 375 LVILENYIPLDKIGDQSKLKGGDNSGADGQTD 406 (406) T ss_pred eeeccCccchhhcccccccCCCCCCCCCCCCC Confidence 99999999998877644 35555554433332 No 44 >protein:vir:8100 Length: 466 # NCBI annotation: gp4 # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:152 # MgeName: Che9c # Cross-refs: genbank:acc:NP_817681;genbank:gi:29566112;genbank:GeneID:1259306 Probab=100.00 E-value=1.6e-87 Score=496.38 Aligned_cols=420 Identities=14% Similarity=0.133 Sum_probs=339.4 Q ss_pred Cchhhhhhcccccccccccc-----------------cCCchHHHHHhhcCC------CCcceechhhhhccHHHHHHHH Q lcl|Aclame:pro 1 MDSVKKFFNFEKRQTSQVIE-----------------LNKDDEKLLEWLGIS------PSTISVKGKNALKVATVFACIK 57 (429) Q Consensus 1 Mg~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~------~~~~~~~~~~a~~~~~v~~~i~ 57 (429) ||||+++++..+........ .....+.+..+++.. .++..++.+.|+++++|++||+ T Consensus 1 M~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~v~~~~a~~~~~v~~~i~ 80 (466) T protein:vir:81 1 MRLIDRLLSTRGAAPRMSIDDYAQMLNEFAFNGIGYGFGGGVPRIQQTLAGPSTELAPDTFVGLATQAYQANGPVFACML 80 (466) T ss_pred CchhHHHhhccCcccccchhhhhhhhhhhhccccccccccccHHHHHhhccccccccCccccccchhhhhccHHHHHHHH Confidence 99999999866543221111 112233444444322 2456688999999999999999 Q ss_pred HHHHhhccCceEEEecCCceeeeeecchhhhhhcccCcCCCCHHHHHHHHHHHHHhhCCeEEEEeeCCC--------Cce Q lcl|Aclame:pro 58 ILSESVSKLPLKIYQEDEYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRK--------GKV 129 (429) Q Consensus 58 ~ia~~ia~~~~~~~~~~~~~~~~~~~~~~~~~l~~~PN~~~s~~~~~~~~~~~~l~~G~~~~~~~~~~~--------g~~ 129 (429) +||+.||++||++++.+++++.....|+++.|+ .+||++||+++||+.++.+++++||||++++++.. |.+ T Consensus 81 ~Ia~~ia~lp~~~~~~~~~~~~~~~~~~~~~L~-~~PN~~~t~~~f~~~l~~~lll~Gnay~~i~r~~~g~l~~~~~g~~ 159 (466) T protein:vir:81 81 VRQLVFSSVRFRWQRLRDGKPSDTFGSRDLQIL-ETPWKGGTTQDMLSRMIQDADLAGNSYWTIVDGEFVRMRPDWVDVV 159 (466) T ss_pred HHHHhhccCceEEEEecCCceeeccccHHHHHh-hCCCCCCCHHHHHHHHHHHHHhcCCeEEEEEecCccccccccCcce Confidence 999999999999999887666665566666555 69999999999999999999999999999999764 558 Q ss_pred EEEEeeCCcceEEEEcCCcceeeeeeEEEe-ecccCceEEEccceEEEeecC-CCCCcccccCHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 130 QALWPIDASKVTVYIDDVGLLNSKTKMWYV-VNTGGQQRVLKPEEILHFKNG-ITLDGLVGVPTMEYLKSTLENSASADK 207 (429) Q Consensus 130 ~~l~~l~p~~v~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~evih~~~~-~~~~~~~G~s~~~~~~~~i~~~~~~~~ 207 (429) .+|++++|+.|++..+.+........+... ...++..+.|+++||||||.+ ++.++.+|+||+.++.+++.++.++++ T Consensus 160 ~~l~~l~~~~v~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~dviHir~~~~~~d~~~G~s~i~~~~~~i~~~~a~~~ 239 (466) T protein:vir:81 160 VEERMVRGGRGELGGGQLGWRKVGYLYTEGGRQSGNESVGFLAEDVVHFAPIPDPLASYRGMSWLTPILREIRADQAMSK 239 (466) T ss_pred eEEEEecCcceEEEEcCCCceEEEEEEEecCcccccceeeeccccEEEEcCCCCcccccccccHHHHHHHHHHHHHHHHH Confidence 999999999999998776543322111110 112335678999999999964 678899999999999999999999999 Q ss_pred HHHHHHHccCCcceEEEeCCCCCHHHHHHHHHHHHHHhcccccccceeecCCCceeEecCCChhHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 208 FINNFYKQGLQVKGLVQYVGDLNEDAKKVFRENFESMSSGLQNSHRIALMPVGYQFQPISLNMSDAQFLENTELTIRQIA 287 (429) Q Consensus 208 ~~~~~~~ng~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~g~~~~~~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia 287 (429) +..++|+||++|+|+++.+..+++|+.+++++.|++.++|..|+|+++|+++|++|++++++++|+||+|.+++++++|| T Consensus 240 ~~~~~f~ng~~p~gil~~~~~l~~e~~~~~~~~~~~~~~g~~n~g~~~vl~~g~~~~~l~~~~~d~q~le~~~~~~~~Ia 319 (466) T protein:vir:81 240 HQAKFFDNGATVNLVIKHNPMADPAAVKKWADEVNSKHAGVDNAWKNLNLYPGADADVVGSNLQEIDFKNVRGGGETRIA 319 (466) T ss_pred HHHHHHhcCCCcceEEecCCCCCHHHHHHHHHHHHHHhcCccccccceEcCCCceEEEccCChhHHHHHHHHHHHHHHHH Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred HHhcCChhhcCCc---cccccccHHHHHHHHHHHHHhHHHHHHHHHHHHhhccchhhcchhhhhhhhhhHhhhhHHHHHH Q lcl|Aclame:pro 288 TAFGIKMHQLNDL---SKATLNNIEQQQQQFYTDTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAILRADIKTRYE 364 (429) Q Consensus 288 ~~fgvp~~~l~~~---~~~~~~n~~~~~~~~~~~~l~P~~~~i~~~l~~~ll~~~~~~~~~~~~fd~~~l~~~d~~~~~~ 364 (429) ++|||||.+||.. ..++|+|.|++.+.|+++||.|+++.||++|+++|+...+. .+++++||.+.+++.|.+++++ T Consensus 320 ~~fgVPp~~lG~~~~~~~st~sn~eq~~~~f~~~tl~P~~~~ie~~l~~~L~~~~~~-~~~~~~f~~~~llr~d~~~r~~ 398 (466) T protein:vir:81 320 AAAGVPPVIVGLSEGLAAATYSNYGQARRRLADGTAHPLWQNLSGCIGHVMPDMGPD-VRLWYDADDVPFLREDEKDAAD 398 (466) T ss_pred HHhCCCHHHcccccCCCccccccHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcccC-cceEEEecchhhhccCHHHHHH Confidence 9999999999864 45789999999999999999999999999999999876654 4578999999999999998887 Q ss_pred H-------HHHHHhCCCCCHHHHHHHhCCCCCCCcceeee-ccccccccccccccCCCCCCCCCCCCCCCCCC Q lcl|Aclame:pro 365 A-------YRTGIQGGFLKPNEARSKEDLPPEAGGDRLLV-NGNMLPIDMAGQAYLKGGDTNGEVSKEGNEGN 429 (429) Q Consensus 365 ~-------~~~~~~~g~~t~NE~R~~~Gl~~~~~gD~~~~-~~n~~~~~~~~~~~~~~g~~~~~~~~~~~~~n 429 (429) + +..++.+|+ |+||+|+ ++++||.++. +.++.+++........+. +.+++..+++|+| T Consensus 399 ~~~~~~~~~~~~~~~g~-t~nE~r~-----~~~~gd~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~Gg~~n 464 (466) T protein:vir:81 399 IQKVRAETINTLITAGY-EPESVVA-----AVNSGDLRLLKHTGLTSVQLLPPGVSASA-SSDTPTSGGADDN 464 (466) T ss_pred HHHHHHHHHHHHHHcCC-Chhhccc-----cccCCccccccCCCcchhhhccccccccc-CCCCcccCCCCcC Confidence 6 567888995 9999995 4567776544 445556555433333222 2223334444555 No 45 >protein:vir:8317 Length: 409 # NCBI annotation: gp34 # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:154 # MgeName: Corndog # Cross-refs: genbank:acc:NP_817885;genbank:gi:29566318;genbank:GeneID:1259513 Probab=100.00 E-value=2e-88 Score=501.39 Aligned_cols=375 Identities=20% Similarity=0.195 Sum_probs=317.2 Q ss_pred Cchhhhhhcc------------------------cccccccccccCCchHHHHHhhc-----CCCCcceechhhhhccHH Q lcl|Aclame:pro 1 MDSVKKFFNF------------------------EKRQTSQVIELNKDDEKLLEWLG-----ISPSTISVKGKNALKVAT 51 (429) Q Consensus 1 Mg~~~~~~~~------------------------~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~a~~~~~ 51 (429) ||+|+++|+. ++++..+.............|.| .+.+...++.+.++++++ T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~t~~~~~~~~~ 80 (409) T protein:vir:83 1 MGFWSNLFGIPSIPDLPNDNGPVDYNPGDPDMVEFRGPEEEPEARALPWIRPTAWSGYPESWATPSWGSAQDKLRTLIDV 80 (409) T ss_pred CchhhhhcccccCCCcccccccccccCCCCceeeccCCCcchhhhhcccccccccccccccccccCccccchhhHhhhHH Confidence 9999999985 22222211111111111112221 234566788899999999 Q ss_pred HHHHHHHHHHhhccCceEEEecCCceeeeeecchhhhhhcccCcCCCCHHHHHHHHHHHHHhhCCeEEEE-eeCCCCceE Q lcl|Aclame:pro 52 VFACIKILSESVSKLPLKIYQEDEYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANI-EFDRKGKVQ 130 (429) Q Consensus 52 v~~~i~~ia~~ia~~~~~~~~~~~~~~~~~~~~~~~~~l~~~PN~~~s~~~~~~~~~~~~l~~G~~~~~~-~~~~~g~~~ 130 (429) ||+||++||++||++|+++++.++. .+.+.++|+.+||++||+++||+.++.+|++ ||+|+++ .++..|.++ T Consensus 81 v~acV~~Ia~~iA~lpl~~~~~~~~------~~~~~~ll~~~PN~~~t~~~f~~~l~~~lll-Gnay~~~i~r~~~G~~~ 153 (409) T protein:vir:83 81 AWACIDLNASVLSSMPIYRMRNGRI------IDSVAWMSNPDPEVYTSWQEFAKQLFWDFQL-GEAFVLPMAHGSDGYPI 153 (409) T ss_pred HHHHHHHHHHhhccCceEEeeCCcc------ccchhhhcccCCCCCCCHHHHHHHHHHHHhh-CCcEEEEEEECCCCcEE Confidence 9999999999999999999975432 2456778999999999999999999999887 9999875 588899999 Q ss_pred EEEeeCCcceEEEEcCCcceeeeeeEEEeecccCceEEEccceEEEeecCCCCCcccccCHHHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 131 ALWPIDASKVTVYIDDVGLLNSKTKMWYVVNTGGQQRVLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFIN 210 (429) Q Consensus 131 ~l~~l~p~~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~evih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~ 210 (429) +|+||+|+.|++..+.++.. +|.+. + ...++||||||.+++.++.+|+||++++...+.+..++++++. T Consensus 154 ~L~pl~p~~v~v~~~~~g~~------~y~~~--~---~~~~~eiiHir~~~~~~~~~G~spi~~~~~~i~~~~a~~~~~~ 222 (409) T protein:vir:83 154 RFRVVPPWLVNVELKKGARR------EYRIG--G---LNVTDEILHIRYQGNTADAHGHGPLESAAPRQVVIGLLQKYVQ 222 (409) T ss_pred EEEEECCcceEEEEcCCceE------EEEEc--c---ccCccceEEeCCCCCCCCcccccHHHHHHHHHHHHHHHHHHHH Confidence 99999999999988765322 22222 2 2346899999988888999999999999999999999999999 Q ss_pred HHHHccCCcceEEEeCCCCCHHHHHHHHHHHHHHhcccccccceeecCCCceeE-ecCCChhHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 211 NFYKQGLQVKGLVQYVGDLNEDAKKVFRENFESMSSGLQNSHRIALMPVGYQFQ-PISLNMSDAQFLENTELTIRQIATA 289 (429) Q Consensus 211 ~~~~ng~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~g~~~~~~~~vl~~g~~~~-~~~~~~~d~~~~e~~~~~~~~Ia~~ 289 (429) ++|+||++|+|++++++.+++|+.++++++|++.++| |+|+++++.+|+++. +++++++|+||+|.+++++++||++ T Consensus 223 ~~f~nga~p~gil~~~~~ls~e~~~~~~~~~~~~~~~--nag~~~il~~g~~~~~~~~~s~~d~q~le~r~~~~~eIa~~ 300 (409) T protein:vir:83 223 NLAETGGVPLYWLGVERRLSETEAVDLMDRWIESRSK--YAGHPALVTGGATLNQAKSMSAQDLSLMELTQFNEARIAIL 300 (409) T ss_pred HHHhcCCCcceEeecCCCCCHHHHHHHHHHHHHhhCC--ccCccceecCCcccccccCCCHHHHHHHHHHHhhHHHHHHH Confidence 9999999999999999999999999999999998875 789999999999985 6899999999999999999999999 Q ss_pred hcCChhhcCCcc---ccccccHHHHHHHHHHHHHhHHHHHHHHHHHHhhccchhhcchhhhhhhhhhHhhhhHHHHHHHH Q lcl|Aclame:pro 290 FGIKMHQLNDLS---KATLNNIEQQQQQFYTDTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAILRADIKTRYEAY 366 (429) Q Consensus 290 fgvp~~~l~~~~---~~~~~n~~~~~~~~~~~~l~P~~~~i~~~l~~~ll~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~ 366 (429) |||||.+||..+ ..+|+|+|++..+|++.||.|+++.||++|+++|++. +.+++||++.+++.|.+++++.+ T Consensus 301 fgVPp~llg~~~~~~~~tysn~eq~~~~f~~~tL~P~~~~ie~~l~~~Ll~~-----~~~~~f~~~~llr~d~~~r~~~~ 375 (409) T protein:vir:83 301 LGVPPFLVGLPGATGSLTYSNIEQLFSFHDRSSLRPKATAVMAALDRWALPS-----PQHLELNRDDYTRPSLVERATAY 375 (409) T ss_pred hCCCHHHccCCCCccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCC-----CcEEEeehhhhhccCHHHHHHHH Confidence 999999998643 3579999999999999999999999999999999865 45799999999999999999999 Q ss_pred HHHHhCCCCCHHHHHHHhCCCCCCCcceeeeccccc Q lcl|Aclame:pro 367 RTGIQGGFLKPNEARSKEDLPPEAGGDRLLVNGNML 402 (429) Q Consensus 367 ~~~~~~g~~t~NE~R~~~Gl~~~~~gD~~~~~~n~~ 402 (429) ++++++|+||+||+|+++||||++|||++- .+-+ T Consensus 376 ~~~~~~G~lT~NE~R~~~glpp~~ggd~l~--~~gv 409 (409) T protein:vir:83 376 KIMIEAGVMEPNEARAMERLHSEAAAVRLS--GGGV 409 (409) T ss_pred HHHHhCCCcCHHHHHHHhCCCCCCCCcccC--CCCC Confidence 999999999999999999999999999862 2211 No 46 >protein:vir:94666 Length: 723 # NCBI annotation: portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:1527 # MgeName: mu1/6 # Cross-refs: genbank:acc:YP_579205;genbank:gi:93007441;genbank:GeneID:5076785 Probab=100.00 E-value=1.3e-87 Score=496.90 Aligned_cols=402 Identities=18% Similarity=0.255 Sum_probs=325.1 Q ss_pred CchhhhhhcccccccccccccCCchHHHHHhhcCCCCcceechhhhhccHHHHHHHHHHHHhhccCceEEEecCCceeee Q lcl|Aclame:pro 1 MDSVKKFFNFEKRQTSQVIELNKDDEKLLEWLGISPSTISVKGKNALKVATVFACIKILSESVSKLPLKIYQEDEYGIQR 80 (429) Q Consensus 1 Mg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~~~~ 80 (429) |+-+- .....+..|. ..+...++.+.++++++||+||++||++||++||++++.+++ . T Consensus 1 ~~~~~-----------------~~~g~~~~~~--~~~~~~~~~~~~~~~~~V~acV~~Ia~~iA~lpl~l~~~~~~---~ 58 (723) T protein:vir:94 1 MTTFP-----------------SGAGGWNAWS--ADSVFGNGAKGWSNSAVAYRCISMLANNAASVDLVVRGPDGE---L 58 (723) T ss_pred Ccccc-----------------cCCCcccccc--ccccccccHHHHhhhHHHHHHHHHHHHhhccceeEEEcCCCc---c Confidence 22211 1111111222 234445677889999999999999999999999999976543 2 Q ss_pred eecchhhhhhcccCcCCCCHHHHHHHHHHHHHhhCCeEEEEeeCC---CCceEEEEeeCCcceEEEEcCCcce--eeeee Q lcl|Aclame:pro 81 GTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDR---KGKVQALWPIDASKVTVYIDDVGLL--NSKTK 155 (429) Q Consensus 81 ~~~~~~~~~l~~~PN~~~s~~~~~~~~~~~~l~~G~~~~~~~~~~---~g~~~~l~~l~p~~v~~~~~~~~~~--~~~~~ 155 (429) ...|+++++|+.+||++||+++||+.++.+|++.||+|+++.++. .|.+.+||+++|+.+.+....+... ..... T Consensus 59 ~~~~~l~~lL~~~PN~~~t~~~f~~~~~~~lll~Gnay~~i~r~~r~~~g~p~~l~~l~~~~~~v~~~~~~~~~~~~~~~ 138 (723) T protein:vir:94 59 DELHPLSQLWNVMPNRAMPAQVLKALSMTRLQLDGQCHLWLNYNGRTPAGVPDEIWYVYDRVTTIVATRAADAVPQAQII 138 (723) T ss_pred chhhHHHHHHhhCCCCCCCHHHHHHHHHHHHhhcCCeEEEEEecCCccccceeEEEEecCcceEEeecCCCccceeeeee Confidence 346999999999999999999999999999999999999998754 5889999999998887765544322 22233 Q ss_pred EEEeecccCceEEEccceEEEeecCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHHccCCcceEEEeCCCCCHHHHH Q lcl|Aclame:pro 156 MWYVVNTGGQQRVLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGDLNEDAKK 235 (429) Q Consensus 156 ~~~~~~~~g~~~~~~~~evih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~~e~~~ 235 (429) .|..+..+|..+.|+++||||||.+++.++++|+||+.++...+....++++++.++|+||++|+|+++.+ .+++++.+ T Consensus 139 ~y~~~~~~G~~~~~~~~dIiHir~~~~~dg~~G~Spi~~a~~~i~~~~aa~~~~~~~f~NG~~p~giL~~~-~l~~e~~~ 217 (723) T protein:vir:94 139 GYVIERTDGVRVPVLADEMLWLRFSDPYDPLAVMAPWKAARAAVDADFYAATWQRQSFKNGARPGGVVNLG-DMDEQTFT 217 (723) T ss_pred EEEEEecCceeEEecccceEEecCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhcCCCcceEEEcC-CCCHHHHH Confidence 44455678888899999999999988999999999999999999999999999999999999999999986 58999999 Q ss_pred HHHHHHHHHhcccccccceeecC----------CCceeEecCCChhHHHHHHHHHHHHHHHHHHhcCChhhcCCcccccc Q lcl|Aclame:pro 236 VFRENFESMSSGLQNSHRIALMP----------VGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKATL 305 (429) Q Consensus 236 ~~~~~~~~~~~g~~~~~~~~vl~----------~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~fgvp~~~l~~~~~~~~ 305 (429) +++++|++.++|..|+|+++||+ .|++|++++++++|+||+|.+++++++||++|||||.+|++ .+++ T Consensus 218 ~~~~~~~~~~~G~~Nagk~~vL~g~~~~~~vl~~G~~~~~l~~s~~D~q~le~r~~~~~eIa~afgVPp~~i~~--~st~ 295 (723) T protein:vir:94 218 KTVAAFRSQVEGVQNAGRHLLIAGQGSDGGAAGKGATFTSLSMSPAEMDYINSRMHSAEEVMLAFGIRKDALLG--GSTY 295 (723) T ss_pred HHHHHHHHHhhchhhcCcceeecccccccccccCCceEEEccCCHHHHHHHHHHHHhHHHHHHHhCCChhHcCC--CCCc Confidence 99999999999999999999986 59999999999999999999999999999999999999864 4689 Q ss_pred ccHHHHHHHHHHHHHhHHHHHHHHHHHHhhccchhhcchhhhhhhhhhHhhhhHHHHHHHHHHHHhCCCCCHHHHHHHhC Q lcl|Aclame:pro 306 NNIEQQQQQFYTDTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKED 385 (429) Q Consensus 306 ~n~~~~~~~~~~~~l~P~~~~i~~~l~~~ll~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~G 385 (429) +|.+++.+.|+++||.|+++.||++||++|++..+ ..++++||.+.+++.|.+++++.+.+++++|++|+||+|+++| T Consensus 296 sN~e~~~~~f~~~tL~P~~~~ie~~ln~~Ll~~~g--~~~~~~f~~~~lLr~D~~~r~~~~~~~v~~G~~T~NE~R~~lg 373 (723) T protein:vir:94 296 ENQAEAKAAVWTETLIPQMEVMASITDLQLLPDIG--WTVEWDFNSVPALQEDLEAQAGRNQGYLVNDVLMVDEVRATIG 373 (723) T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHhHhhccccc--CceEEeecchhhhhcCHHHHHHHHHHHHhCCCcCHHHHHHHhC Confidence 99999999999999999999999999999986543 3567888888899999999999999999999999999999999 Q ss_pred CCCCCCcc--eeeecc--ccccccccccccCCCC-------------CCCCCCCCC---------CCCCC Q lcl|Aclame:pro 386 LPPEAGGD--RLLVNG--NMLPIDMAGQAYLKGG-------------DTNGEVSKE---------GNEGN 429 (429) Q Consensus 386 l~~~~~gD--~~~~~~--n~~~~~~~~~~~~~~g-------------~~~~~~~~~---------~~~~n 429 (429) +||+|||| .++.|. +.+|.+.......++. +...+.+.. +.+.+ T Consensus 374 lpPi~gGd~~~~~~p~~~~~a~~~~~~p~~~e~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 443 (723) T protein:vir:94 374 LDPLPGGIGQMTLTPYRAQFAPAPAPAPAVEEGAARMLALLERVAADRPLPELPVRATTVLHHDPGPDPQ 443 (723) T ss_pred CCCCCCCcccceeccccccccCCCCCCccchhhhHhhhhhccccccccCcCCCCCCCCCCCCCCcccCCc Confidence 99999987 334553 4444443221111110 000110111 00111 No 47 >protein:vir:80134 Length: 403 # NCBI annotation: Phage portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:1877 # MgeName: bacteriophage bv1 # Cross-refs: genbank:acc:YP_001425602;genbank:gi:155042935;genbank:GeneID:5469563 Probab=100.00 E-value=2.6e-87 Score=495.28 Aligned_cols=396 Identities=21% Similarity=0.271 Sum_probs=327.9 Q ss_pred CchhhhhhcccccccccccccCCchHHHHHhhcCCCCcceech-hhhhccHHHHHHHHHHHHhhccCceEEEecCCceee Q lcl|Aclame:pro 1 MDSVKKFFNFEKRQTSQVIELNKDDEKLLEWLGISPSTISVKG-KNALKVATVFACIKILSESVSKLPLKIYQEDEYGIQ 79 (429) Q Consensus 1 Mg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~~~ 79 (429) ||||+ +|+.+. .+.+.. ....+.. +.......++. ..+..+|+||+||++||+.||++|+++++.++++. T Consensus 1 Mg~~~-~f~~k~--~~~~~~---~~~~~~~--~~~~~~~~~~~~~~~~~~~~V~~~I~~ia~~iA~~p~~~~~~~~~g~- 71 (403) T protein:vir:80 1 MGLFN-FFRRKT--RSEPTN---AISWFLT--QEAYDTLAIPGYTRLSDNPEVRMAVHKIAELISSMTIHLMQNTDNGD- 71 (403) T ss_pred Ccccc-cccccc--cccccc---hhhhhcc--cccccccccchhhhhhhhHHHHHHHHHHHHhhhhCceEEEEecCCce- Confidence 99996 444222 111111 1111111 11112222222 23457899999999999999999999999887764 Q ss_pred eeecchhhhhhcccCcCCCCHHHHHHHHHHHHHhh--CCeEEEEeeCCCCceEEEEeeCCcceEEEEcCCcceeeeeeEE Q lcl|Aclame:pro 80 RGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLY--GNSYANIEFDRKGKVQALWPIDASKVTVYIDDVGLLNSKTKMW 157 (429) Q Consensus 80 ~~~~~~~~~~l~~~PN~~~s~~~~~~~~~~~~l~~--G~~~~~~~~~~~g~~~~l~~l~p~~v~~~~~~~~~~~~~~~~~ 157 (429) ....|+++++|+.+||+.||+++||+.++.++++. ||||+++.++..|++.+||||+|+.|++..+.++.. T Consensus 72 ~~~~~~~~~lL~~~PN~~~t~~~f~~~~v~~~ll~~~Gna~i~~~~~~~g~~~~L~~l~p~~v~~~~~~~g~~------- 144 (403) T protein:vir:80 72 IRIKNELSRKIDINPYSLMTRKAWMYNIVYTMLLDGEGNSVVFPKYTTSGLIDELIPLAPSKVSFVDTDTGYQ------- 144 (403) T ss_pred eecCChHHHHHhccCCcCCCHHHHHHHHHHHHhhcCCccEEEEEEEcCCCcEEEEEEEcCCeeEEEEcCCceE------- Confidence 34579999999999999999999999999999984 789999999999999999999999999988775421 Q ss_pred EeecccCceEEEccceEEEeec-CCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHHccCCcceEEEeCCCCCHHHHHH Q lcl|Aclame:pro 158 YVVNTGGQQRVLKPEEILHFKN-GITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGDLNEDAKKV 236 (429) Q Consensus 158 ~~~~~~g~~~~~~~~evih~~~-~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~~e~~~~ 236 (429) +.+. .+.++++|||||+. +++.++++|+||+.++...+....+++++..++|+||++|+|+++++..+++++.++ T Consensus 145 ~~y~----~~~~~~~eiih~~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~p~~il~~~~~~~~~~~~~ 220 (403) T protein:vir:80 145 IWYQ----GKAYNYDEVLHFIVNPDPEKPYMGRGYRVVLKDIVNNLKQATTTKKSFMSGKYMPSLIVKVDAATAELSSEE 220 (403) T ss_pred EEEe----ecccchhhEEEEeccCCCcCccccccHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEeCCCCChHHHHH Confidence 1121 24689999999994 577888899999999999999999999999999999999999999999999999999 Q ss_pred HHHHHHHHhcccccccceeecCCC-ceeEecC-CChhHHHHHHHHHHHHHHHHHHhcCChhhcCCccccccccHHHHHHH Q lcl|Aclame:pro 237 FRENFESMSSGLQNSHRIALMPVG-YQFQPIS-LNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKATLNNIEQQQQQ 314 (429) Q Consensus 237 ~~~~~~~~~~g~~~~~~~~vl~~g-~~~~~~~-~~~~d~~~~e~~~~~~~~Ia~~fgvp~~~l~~~~~~~~~n~~~~~~~ 314 (429) .+++|.+.+.|..++|++++++++ .+++++. ++++|+|++|.+++++++||++|||||.+||.. ++.++...+ T Consensus 221 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~d~q~~e~~~~~~~~Ia~~fgVPp~~lg~~-----~~~~~~~~~ 295 (403) T protein:vir:80 221 GRNAVFKKYLEASEAGQPWIIPAELLDVEQVKPLSLKDLAIHETVELDKRTVAGIFGVPAFLLGVG-----KYDKDEYNN 295 (403) T ss_pred HHHHHHHHHhhhhhcCCeeeecccccccceeccCCHHHHHHHHHHHHhHHHHHHHhCCCHHHcCCC-----CccHHHHHH Confidence 999999999998899999998765 4555543 689999999999999999999999999999753 234556678 Q ss_pred HHHHHHhHHHHHHHHHHHHhhccchhhcchhhhhhhhhhHhhhhHHHHHHHHHHHHhCCCCCHHHHHHHhCCCCCCCcce Q lcl|Aclame:pro 315 FYTDTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEAGGDR 394 (429) Q Consensus 315 ~~~~~l~P~~~~i~~~l~~~ll~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~Gl~~~~~gD~ 394 (429) |+++||.|+++.||++|+++||++.+ ++++||.+.+++.|.+++++.+.+++++|++|+||+|+++|+||+||||+ T Consensus 296 f~~~~l~P~~~~ie~~l~~kll~~~~----~~~~f~~~~ll~~d~~~~~~~~~~~~~~Gi~t~NE~R~~~gl~p~~ggd~ 371 (403) T protein:vir:80 296 FINSTILPIAKGIEQELTRKLLISPD----LYFKFNPRSLYAYDLKELAEVGSNMYVRGLMEGNEVRDWLGLSPKEGLSE 371 (403) T ss_pred HHHHHHHHHHHHHHHHHHHhccCCCC----cEEEeechhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCe Confidence 99999999999999999999997754 68999999999999999999999999999999999999999999999999 Q ss_pred eeecccccccccccccc-CCCCCCCCCCCCCC Q lcl|Aclame:pro 395 LLVNGNMLPIDMAGQAY-LKGGDTNGEVSKEG 425 (429) Q Consensus 395 ~~~~~n~~~~~~~~~~~-~~~g~~~~~~~~~~ 425 (429) +++++|++|++..++++ .+||+.++.+.++. T Consensus 372 ~~~~~n~~pl~~~~~~~~~k~ge~~~~~~~~~ 403 (403) T protein:vir:80 372 LVILENYIPLDKIGDQNKLKGGEKGGADGQTD 403 (403) T ss_pred EeecccccchhhccchhhccCCCCCCCCCCCC Confidence 99999999999877644 56666655544444 No 48 >protein:vir:960 Length: 413 # NCBI annotation: portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:19 # MgeName: bIL285 # Cross-refs: genbank:acc:NP_076614;genbank:gi:13095722;genbank:GeneID:920279 Probab=100.00 E-value=9.9e-87 Score=492.08 Aligned_cols=391 Identities=22% Similarity=0.235 Sum_probs=320.7 Q ss_pred Cchhh---hhh--ccccccccccc-------c-----cCCchHHHHHhhcCCCCcceechhhhhccHHHHHHHHHHHHhh Q lcl|Aclame:pro 1 MDSVK---KFF--NFEKRQTSQVI-------E-----LNKDDEKLLEWLGISPSTISVKGKNALKVATVFACIKILSESV 63 (429) Q Consensus 1 Mg~~~---~~~--~~~~~~~~~~~-------~-----~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~~~i~~ia~~i 63 (429) |+.++ +.. ++|+++++... . .....+.+..+++.. ....++++++|++||++||++| T Consensus 1 ~~~~~~~~~~~~m~~F~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~v~~cI~~ia~~i 74 (413) T protein:vir:96 1 MPGVSEIRKDKNLKFFNNKRSPTEESKAKDEIPKAPQVVMTLPNFFKELISD------GYTKLSDSPEVRMAVDCIADLV 74 (413) T ss_pred CCccchhhhhhcCCccccCCCcchhhhhhccccccccccccchhhHhhhccc------hhHHHhhchHHHHHHHHHHHhh Confidence 33322 111 12222111100 0 001111222222111 1134678999999999999999 Q ss_pred ccCceEEEecCCceeeeeecchhhhhhcccCcCCCCHHHHHHHHHHHHHhhCCeEEEEeeCCCC-ceEEEEeeCCcceEE Q lcl|Aclame:pro 64 SKLPLKIYQEDEYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKG-KVQALWPIDASKVTV 142 (429) Q Consensus 64 a~~~~~~~~~~~~~~~~~~~~~~~~~l~~~PN~~~s~~~~~~~~~~~~l~~G~~~~~~~~~~~g-~~~~l~~l~p~~v~~ 142 (429) |++||++++.++++.. ...|+++++|+.+||++||+++||+.++.+++++||||++++++..| .+.+|||++|++|++ T Consensus 75 a~~~~~~~~~~~~~~~-~~~~~~~~ll~~~PN~~~t~~~f~~~~~~~lll~Gn~~~~i~r~~~g~~~~~L~~l~~~~v~~ 153 (413) T protein:vir:96 75 SNMTIQLMQNGETGDK-RIKNDLSRVVDIEPNKYLSRKTFIQWLVRSMLLEGNGNAVVKPQVSGDKIIGLTPISPYKVTF 153 (413) T ss_pred ccCceEEEEecCCCcc-ccccHHHHHHHhccccCCCHHHHHHHHHHHHhhcCCeEEEEEEcCCCCceEEEEEecCceeEE Confidence 9999999998876643 45799999999999999999999999999999999999999999887 578999999999999 Q ss_pred EEcCCcceeeeeeEEEeecccCceEEEccceEEEeec-CCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHHccCCcce Q lcl|Aclame:pro 143 YIDDVGLLNSKTKMWYVVNTGGQQRVLKPEEILHFKN-GITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKG 221 (429) Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~evih~~~-~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~ 221 (429) ..+.+. ..|.+..++ .+++++||||||. +++.++++|.||+.++...+.+..+++++..++|+||++|+| T Consensus 154 ~~~~~~-------~~y~~~~~~--~~~~~~evih~k~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~p~g 224 (413) T protein:vir:96 154 NVSDDD-------LDYSITFDN--KEYDPSTLLHFVLNPSIERPFIGTGYKVALKDIVGNLKQASVTKKGFMASEYMPNL 224 (413) T ss_pred EEcCCe-------EEEEEeecC--cEEchhhEEEEeccCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHHhccCCccE Confidence 876532 223333333 4689999999995 466678899999999999999999999999999999999999 Q ss_pred EEEeCCCCCHHHHHHHHHHHHHHhcccccccceeecCCCc-eeEec-CCChhHHHHHHHHHHHHHHHHHHhcCChhhcCC Q lcl|Aclame:pro 222 LVQYVGDLNEDAKKVFRENFESMSSGLQNSHRIALMPVGY-QFQPI-SLNMSDAQFLENTELTIRQIATAFGIKMHQLND 299 (429) Q Consensus 222 ~~~~~~~~~~e~~~~~~~~~~~~~~g~~~~~~~~vl~~g~-~~~~~-~~~~~d~~~~e~~~~~~~~Ia~~fgvp~~~l~~ 299 (429) +++++..+++++.++++++|++.++|..++|+++++++|. ++.++ +++++|++++|.+++++++||++|||||.+||. T Consensus 225 il~~~~~l~~e~~~~~~~~~~~~~~g~~n~g~~~vl~~~~~~~~~~~~~~~~d~q~~e~~~~~~~~Ia~~fgVP~~~lg~ 304 (413) T protein:vir:96 225 IVSVDSDSDELSDEEGRENFEEMYLKRKEAGKPWIIPEGMVNVQQIKPLTLNDLAINDAVTLDKKTVAGIFGVPAFLLGV 304 (413) T ss_pred EEEeCCCCCHHHHHHHHHHHHHHhcCccccCceeeecCCcccccccccCChhHHHHHHHHHHHHHHHHHHhCCCHHHcCC Confidence 9999999999999999999999999999999999997665 55555 578999999999999999999999999999975 Q ss_pred ccccccccHHHHHHHHHHHHHhHHHHHHHHHHHHhhccchhhcchhhhhhhhhhHhhhhHHHHHHHHHHHHhCCCCCHHH Q lcl|Aclame:pro 300 LSKATLNNIEQQQQQFYTDTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNE 379 (429) Q Consensus 300 ~~~~~~~n~~~~~~~~~~~~l~P~~~~i~~~l~~~ll~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~NE 379 (429) . ++.+++..+|++.||.|+++.|+++||++++++ +++++||++.+++.|.+++++++.+++++|++|+|| T Consensus 305 ~-----~~~~~~~~~~~~~~l~P~~~~ie~~ln~~ll~~-----~~~~~fd~~~ll~~d~~~~~~~~~~~~~~G~~t~NE 374 (413) T protein:vir:96 305 G-----TYNKDEFNNFINTKIMSIAQVIQQTYNKLIVEE-----DMYFSLNPRSLYNYSLTEMVSAGAQMTQLNALRRNE 374 (413) T ss_pred C-----cchHHHHHHHHHHHHHHHHHHHHHHHHHhhCCC-----CcEEEEechhhhccCHHHHHHHHHHHHhCCCcCHHH Confidence 3 246788899999999999999999999998864 678999999999999999999999999999999999 Q ss_pred HHHHhCCCCCCCcceeeecccccccccccccc-CCCCCC Q lcl|Aclame:pro 380 ARSKEDLPPEAGGDRLLVNGNMLPIDMAGQAY-LKGGDT 417 (429) Q Consensus 380 ~R~~~Gl~~~~~gD~~~~~~n~~~~~~~~~~~-~~~g~~ 417 (429) +|+++|+||+||||++++++|++|++..++.+ .++|++ T Consensus 375 ~R~~~g~~p~~~gd~~~~~~n~~~~~~~~~~~~~~~~dt 413 (413) T protein:vir:96 375 FRNWVGMPPDAEMDDLLVLENYLQQKDLVNQKKLIQDET 413 (413) T ss_pred HHHHhCCCCCCCcceeeecccccchhhcccccCCCCCCC Confidence 99999999999999999999999998765433 233333 No 49 >protein:vir:3843 Length: 397 # NCBI annotation: hypothetical protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:322 # MgeName: phi adh # Cross-refs: genbank:acc:NP_050149;swissprot:trembl:q9t1f8;genbank:gi:9633041;uniprot:Q9T1F8;genbank:GeneID:1262206 Probab=100.00 E-value=3.5e-85 Score=483.59 Aligned_cols=396 Identities=17% Similarity=0.150 Sum_probs=329.0 Q ss_pred CchhhhhhcccccccccccccCCchHHHHHhhcCCCCcceechhhhhccHHHHHHHHHHHHhhccCceEEEecCCceeee Q lcl|Aclame:pro 1 MDSVKKFFNFEKRQTSQVIELNKDDEKLLEWLGISPSTISVKGKNALKVATVFACIKILSESVSKLPLKIYQEDEYGIQR 80 (429) Q Consensus 1 Mg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~~~~ 80 (429) ||||++.+.. + + ..+..+..+..+++.+.+...++.+.|+++++|++||++||++||++||++. T Consensus 1 M~~f~~~~~~---~--~--~~~~~~~~~~~~~~~~~~~~~v~~~~al~~~~V~~~v~~ia~~ia~~p~~~~--------- 64 (397) T protein:vir:38 1 MPLLKLNKSH---S--Q--GFSLNDPDWVNFLTGGEAQKYVSADTALKNSDIFSLIMQLSGDLAMVRYTSE--------- 64 (397) T ss_pred Ccchhhhhcc---c--C--cccCCchhhhhhhcCCcCCceechHHhhccHHHHHHHHHHHHHHhhCccccc--------- Confidence 9999875421 1 1 1222334566666666778889999999999999999999999999999642 Q ss_pred eecchhhhhhcccCcCCCCHHHHHHHHHHHHHhhCCeEEEEeeCCCCceEEEEeeCCcceEEEEcCCcceeeeeeEEEee Q lcl|Aclame:pro 81 GTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVYIDDVGLLNSKTKMWYVV 160 (429) Q Consensus 81 ~~~~~~~~~l~~~PN~~~s~~~~~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~l~p~~v~~~~~~~~~~~~~~~~~~~~ 160 (429) |+.+++|+.+||++||+++||+.++.+++++||||++++++..|.+.+||+++|++|++..+.++.... ....+.. T Consensus 65 ---~~~~~~l~~~PN~~~s~~~f~~~~~~~lll~Gna~~~i~r~~~g~~~~l~~l~~~~v~i~~~~~~~~~~-y~~~~~~ 140 (397) T protein:vir:38 65 ---SDRSQSIISNPSVTANGYSFWQGMFAQLLLDGNCYAYRHKNTNGVDLSWEYLRPSQVQPMLLQDGSGLI-YNINFDE 140 (397) T ss_pred ---ccHHHHHHhcCCCCCCHHHHHHHHHHHhhhcCCEEEEEEECCCCcEEEEEEEcCceeEEEEcCCCceEE-EEEEecc Confidence 566778888999999999999999999999999999999999999999999999999998876542211 1112222 Q ss_pred cccCceEEEccceEEEeecCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHHccCCcceEEEeCCCCCHHHHHHHHHH Q lcl|Aclame:pro 161 NTGGQQRVLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGDLNEDAKKVFREN 240 (429) Q Consensus 161 ~~~g~~~~~~~~evih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~~e~~~~~~~~ 240 (429) ..+|..+.|+++||||++++++.+..+|.||+.++...+....++.++..++|+||++|+|+++++..+++++.+++++. T Consensus 141 ~~~~~~~~~~~~eiih~~~~~~~~~~~G~s~i~~~~~~i~~~~~~~~~~~~~f~ng~~~~~il~~~~~~~~e~~~~~~~~ 220 (397) T protein:vir:38 141 PAIGYMENVPAADVIHIRLLSKNGGKTGISPLSALINEQQIKDASNELTLKALKQSVTASAVLTIQKGGLLDAETRIARS 220 (397) T ss_pred ccccceeEecCccEEEecCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHHhccCCccEEEEeCCCCCHHHHHHHHHH Confidence 34566788999999999999888889999999999999999999999999999999999999999999999999999999 Q ss_pred HHHHhcccccccceeecCCCceeEecCCChhHHHHHHHHHHHHHHHHHHhcCChhhcCCccccccccHHHHHHHHHHHHH Q lcl|Aclame:pro 241 FESMSSGLQNSHRIALMPVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKATLNNIEQQQQQFYTDTL 320 (429) Q Consensus 241 ~~~~~~g~~~~~~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~fgvp~~~l~~~~~~~~~n~~~~~~~~~~~~l 320 (429) |+..+++ .|+|+++|+++|++|++++.++.|++|+|.+++.+++||++|||||.+|++.+.+ ++|.++ ...|++.|| T Consensus 221 ~~~~~~~-~n~~~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~afgVp~~~lg~~~~~-~~~~e~-~~~~~~~~l 297 (397) T protein:vir:38 221 KEISKQI-HNSDGPVVIDALEDYKPLEVKGNIASLLNQVDWTRDQIAKVYGVPDSYLNGQGDQ-QSSITQ-ISGQYAKSL 297 (397) T ss_pred HHHHhcc-cccCCceecCCCceEEecCCChhHHHHHHHHHHHHHHHHHHhCCCHHHhCCCCCc-ccHHHH-HHHHHHHHH Confidence 9988766 6899999999999999999999999999999999999999999999999986544 466664 467889999 Q ss_pred hHHHHHHHHHHHHhhccchhhcchhhhhhhhhhHhhhhHHHHHHHHHHHHhCCCCCHHHHHHHhCCCCCCCcceeeeccc Q lcl|Aclame:pro 321 QATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEAGGDRLLVNGN 400 (429) Q Consensus 321 ~P~~~~i~~~l~~~ll~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~Gl~~~~~gD~~~~~~n 400 (429) .|++..|+++||++++++. +|++..+++.|.+++++.+++++++|++|+||+|+++|++|++++|.+..... T Consensus 298 ~P~~~~ie~~ln~~l~~~~--------~~~~~~~~~~d~~~~~~~~~~~~~~G~~t~nE~R~~lg~~p~~~~d~~~~~~~ 369 (397) T protein:vir:38 298 NRYVQAIVGELNDKLHANI--------SANIRFAIDAMGDQYASTISSSVKGGTIAGNQARFILQNSGYLAKDLPDPEKE 369 (397) T ss_pred HHHHHHHHHHHHHhccChh--------cccccccccCCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCcccccccc Confidence 9999999999999998753 34445567789999999999999999999999999999999999986654443 Q ss_pred cccccccccccCCCCCCCCCCCCCCCCCC Q lcl|Aclame:pro 401 MLPIDMAGQAYLKGGDTNGEVSKEGNEGN 429 (429) Q Consensus 401 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~n 429 (429) ..+. .+....++|+.+++.+++.+.+. T Consensus 370 ~~~~--~~~~~~~~g~~~~~~~~e~~~~~ 396 (397) T protein:vir:38 370 PQQA--IQLIQQEGGENDGNNSDERGSDP 396 (397) T ss_pred cccc--ccccccccCCCCCCCCCCCCCCC Confidence 3332 23344555555555444444334 No 50 >protein:vir:102727 Length: 945 # NCBI annotation: portal protein # Family: family:all:2446 # MgeID: mge:1610 # MgeName: YS40 # Cross-refs: genbank:acc:YP_874016;genbank:gi:118197623;genbank:GeneID:4495919 Probab=100.00 E-value=5.4e-85 Score=482.56 Aligned_cols=421 Identities=15% Similarity=0.156 Sum_probs=317.5 Q ss_pred Cch--hh--------hhhccccccccc-ccc---cCC-chHHHHHhhc-CCCCcceechhhhhccHHHHHHHHHHHHhhc Q lcl|Aclame:pro 1 MDS--VK--------KFFNFEKRQTSQ-VIE---LNK-DDEKLLEWLG-ISPSTISVKGKNALKVATVFACIKILSESVS 64 (429) Q Consensus 1 Mg~--~~--------~~~~~~~~~~~~-~~~---~~~-~~~~~~~~~~-~~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia 64 (429) -+| |+ ++..+++++... ... ... +...+..+.. ......+++.+.++++++|++||++||++|| T Consensus 60 ~~~~~~~~~~~~kk~~i~~pfkkk~~~~~~d~f~~s~es~s~vtsls~pdaf~~vnVs~~~AlknsaV~scI~~IA~sIA 139 (945) T protein:vir:10 60 YSIIIFRKNQVLKKEKIIVPYNHQEPPFKFNLFEYSPESLMYLPSISDPDAFFLINLFRKYRFNNDSKLIKVSEIPKKLT 139 (945) T ss_pred eeeeeehhhhHHHhhcccccccccccchhhhhhhccCccceecccccCccceeeehhhhhhhhccHHHHHHHHHHHhhhc Confidence 122 11 111122221110 000 000 0000000000 0112345677889999999999999999999 Q ss_pred cCceEEEecCCcee------eeeecchhhhhhcccCcCCCCHHH----HHHHHHHHHHhhCCeEEEEeeCCCCceEEEEe Q lcl|Aclame:pro 65 KLPLKIYQEDEYGI------QRGTKHYLNNLLRLRPNPYMSSMN----FFGSLEAQKNLYGNSYANIEFDRKGKVQALWP 134 (429) Q Consensus 65 ~~~~~~~~~~~~~~------~~~~~~~~~~~l~~~PN~~~s~~~----~~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~ 134 (429) ++|+++|+..+++. .....|+++.+|+ +||++||+++ |++.++.+++++||+|++++|+..|++.+||| T Consensus 140 sLPlklYrr~edG~~~~~~kk~~~~hpL~~LL~-rPNp~mT~~eFwqsFl~~Lv~dLLL~GNAYieIiRd~~G~ii~L~p 218 (945) T protein:vir:10 140 SKELEIYKHIEDKHVNYYLKRIRDARNILEFLE-RPDPYFSEVNSWEYLLGMVLDDILTIDRGAIVKIRDEQGNLVAITP 218 (945) T ss_pred cCceEEEEecccCcccccccccccchHHHHHHh-CCCcccChhHHHHHHHHHHHHHHhhcCCeEEEEEECCCCcEEEEEE Confidence 99999998876653 3345789999996 8999999998 55678899999999999999999999999999 Q ss_pred eCCcceEEEEcCCcceeeeeeEEEeecccCceEEEccceEEE-eecCCCCCc--ccccCHHHHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 135 IDASKVTVYIDDVGLLNSKTKMWYVVNTGGQQRVLKPEEILH-FKNGITLDG--LVGVPTMEYLKSTLENSASADKFINN 211 (429) Q Consensus 135 l~p~~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~evih-~~~~~~~~~--~~G~s~~~~~~~~i~~~~~~~~~~~~ 211 (429) ++|++|++..+.++... ..++....++....++++++|| ++.+++... .+|+||+.++..++..+.++++++.+ T Consensus 219 LdPs~Vti~~ddDG~~~---y~Yv~~idG~~~~~v~a~DvIlhirn~s~DG~~~GyGlSPIeaa~~aI~~alAaek~aar 295 (945) T protein:vir:10 219 VDGTTIKPILSEDTGIV---VGYVQEVDGAIVAHFDKRDVVLFRQNLTPDVYMYGYSLPPIEILYKVILSDIFIDKGNLD 295 (945) T ss_pred ECCcceEEEEcCCCcEE---EEEEEecCCceEEEecCCceEEEeccCCCCcccccCCchHHHHHHHHHHHHHHHHHHHHH Confidence 99999999887754322 1222233344455788888765 555555443 36999999999999999999999999 Q ss_pred HHH-ccCCcceEEEeC----------CCCCHHHHHHHHHHHHHHhcccccccceeecCCCceeEecCCChhHHHHHHHHH Q lcl|Aclame:pro 212 FYK-QGLQVKGLVQYV----------GDLNEDAKKVFRENFESMSSGLQNSHRIALMPVGYQFQPISLNMSDAQFLENTE 280 (429) Q Consensus 212 ~~~-ng~~~~~~~~~~----------~~~~~e~~~~~~~~~~~~~~g~~~~~~~~vl~~g~~~~~~~~~~~d~~~~e~~~ 280 (429) +|. ||++|+|+++++ +.+++++.+++++.|++.++| .++|+++++++|++|+++++++.|+|++|.++ T Consensus 296 ~FskNGa~PsGILsvkg~~~~d~k~~~~LseEq~erlKe~wee~~sG-~NnG~piVLdeGmef~pLs~s~~DaQfLEsrk 374 (945) T protein:vir:10 296 YYRKGGSIPEGILAIEPPSYKEGDIYPQLSREQLESIQRQLQAIMMG-DYTQVPILSGGKFTWIDFKGKRRDMQFKELAE 374 (945) T ss_pred HHHhCCCccceEEEecCccccccccccccCHHHHHHHHHHHHHHhCC-cccccceecCCCceEEEccCChhHHHHHHHHH Confidence 995 788999999864 457899999999999999998 46788899999999999999999999999999 Q ss_pred HHHHHHHHHhcCChhhcCCccccccccHHHHHHHHHHHHHhHHHHHHHHHHHHhhccchhhcchhhhhhhhhhHhhhhHH Q lcl|Aclame:pro 281 LTIRQIATAFGIKMHQLNDLSKATLNNIEQQQQQFYTDTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAILRADIK 360 (429) Q Consensus 281 ~~~~~Ia~~fgvp~~~l~~~~~~~~~n~~~~~~~~~~~~l~P~~~~i~~~l~~~ll~~~~~~~~~~~~fd~~~l~~~d~~ 360 (429) +++++||++|||||.+||..+.++++|.+++...|++++|.|++..|+++||++++... ...+++++| +.+...|.+ T Consensus 375 fs~eeIArAFGVPP~lLG~~e~st~SNiEqq~~~Fv~~tL~Pil~~IEqeLNrkLl~~~-eg~~i~fdF--d~ldl~D~k 451 (945) T protein:vir:10 375 FVARKICAVYQVSPQDVGILEGSNKATAEVMASLTKAKGLEPLMATISKGFDEVVSEFR-NEKDIKLWF--KEDDLEKER 451 (945) T ss_pred HHHHHHHHHhCCCHHHcccCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc-cCceeEEEe--cchhccCHH Confidence 99999999999999999998889999999999999999999999999999999876443 233344555 555567889 Q ss_pred HHHHHHHHHHhCCCCCHHHHHHHhCCCCCCCcceeeecc-ccccccccccc-----------------cCCCCCCCCCCC Q lcl|Aclame:pro 361 TRYEAYRTGIQGGFLKPNEARSKEDLPPEAGGDRLLVNG-NMLPIDMAGQA-----------------YLKGGDTNGEVS 422 (429) Q Consensus 361 ~~~~~~~~~~~~g~~t~NE~R~~~Gl~~~~~gD~~~~~~-n~~~~~~~~~~-----------------~~~~g~~~~~~~ 422 (429) ++++.+.+++++|+||+||+|+++|+||+||||+++++. |+.|.+..... ..+||+.+++.+ T Consensus 452 sraEal~kli~sGiLTiNEvRe~lGLpPIeGGD~lli~~nn~~P~d~~~ka~~ga~p~q~aq~~~dqp~~kGGe~dEns~ 531 (945) T protein:vir:10 452 DWWNIIQGQLNTGFRSINEARMEKGLEPVPWGDVPFSGLRNWKPEDEQAKAQQGAMPPQLAQAMADQPSQQGGGVDENSS 531 (945) T ss_pred HHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCcceeeeccccccccccccccccCCCCcccccCCCCCCCCCCCCCCCCCC Confidence 999999999999999999999999999999999999987 45565443211 122222222222 Q ss_pred CCCCCCC Q lcl|Aclame:pro 423 KEGNEGN 429 (429) Q Consensus 423 ~~~~~~n 429 (429) .+++..| T Consensus 532 ~psE~kd 538 (945) T protein:vir:10 532 VPSEQKN 538 (945) T ss_pred CCCcccc Confidence 2222222 No 51 >protein:vir:9359 Length: 348 # NCBI annotation: head portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:166 # MgeName: phi 12 # Cross-refs: genbank:acc:NP_803337;genbank:gi:29028648;genbank:GeneID:1258089 Probab=100.00 E-value=1.6e-85 Score=485.46 Aligned_cols=346 Identities=26% Similarity=0.447 Sum_probs=314.4 Q ss_pred hccCceEEEecCCceeeeeecchhhhhhcccCcCCCCHHHHHHHHHHHHHhhCCeEEEEeeCCCCceEEEEeeCCcceEE Q lcl|Aclame:pro 63 VSKLPLKIYQEDEYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTV 142 (429) Q Consensus 63 ia~~~~~~~~~~~~~~~~~~~~~~~~~l~~~PN~~~s~~~~~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~l~p~~v~~ 142 (429) ||++|+++++.++. ..|+++++|+.+||++||+++||+.++.+++++||||++++|+..|++.+|||++|++|++ T Consensus 1 ia~lp~~~~~~~~~-----~~~~l~~lL~~~PN~~~t~~~f~~~~~~~l~l~Gna~~~i~r~~~G~~~~L~~l~~~~v~~ 75 (348) T protein:vir:93 1 MASLPLKMYEDYKV-----VNTEVSDLLTVSPNNSLSSFDFINQIETIRNEKGNAYVLIERDIYHQPSKLFLLNPDVVEM 75 (348) T ss_pred CcccceEeEecCcC-----cccHHHHHHHhCCCCCCCHHHHHHHHHHHHhhcCCeEEEEEECCCCcEEEEEEEcCCceEE Confidence 99999999986653 3599999999999999999999999999999999999999999999999999999999999 Q ss_pred EEcCCcceeeeeeEEEeecccCceEEEccceEEEeecCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHHccCCcceE Q lcl|Aclame:pro 143 YIDDVGLLNSKTKMWYVVNTGGQQRVLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGL 222 (429) Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~evih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~ 222 (429) ..+.+.. ...|.....+|..+.|+++||||||++++.++.+|+||+.++...+.+..+++++. +..++..++++ T Consensus 76 ~~~~~~~----~~~y~~~~~~g~~~~~~~~eiih~r~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~--~~~~~~~~~~i 149 (348) T protein:vir:93 76 LIENQSR----ELYYSIHAATGNKLIVHNMDMLHFKHIVASNMVQGISPIDVLKNTTDFDNAVRTFN--LTEMQKPDSFM 149 (348) T ss_pred EEeCCCc----EEEEEEEcCCCeEEEEccccEEEecCCCCCCceeeccHHHHHHHHHHHHHHHHHHH--HHhcCCCceeE Confidence 8876432 23344556677888999999999998888899999999999999999999998886 44445556788 Q ss_pred EEeCCCCCHHHHHHHHHHHHHHhcccccccceeecCCCceeEecCCChhHHHHHHHHHHHHHHHHHHhcCChhhcCCccc Q lcl|Aclame:pro 223 VQYVGDLNEDAKKVFRENFESMSSGLQNSHRIALMPVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSK 302 (429) Q Consensus 223 ~~~~~~~~~e~~~~~~~~~~~~~~g~~~~~~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~fgvp~~~l~~~~~ 302 (429) ++.+..+++|+.++++++|++.+. ++++++++++|++|++++++++|+|++|.+++++++||++|||||.+|+..+. T Consensus 150 ~~~~~~l~~e~~~~~~~~~~~~~~---n~~~~~vl~~g~~~~~l~~~~~d~q~~e~~~~~~~~Ia~~fgVP~~~lg~~~~ 226 (348) T protein:vir:93 150 LKYGSNVSTEKRQQVLEDFKQYYE---ENGGILFQEPGVEIEPLPKKYVSEDIVASENLTRERVANVFQLPSIFLNARSN 226 (348) T ss_pred EecCCCCCHHHHHHHHHHHHHHhh---cCCCeeecCCCceEEEcCCChhHHHHHHHHHHHHHHHHHHhCCCHHHhCCCCC Confidence 889999999999999999999874 56889999999999999999999999999999999999999999999999889 Q ss_pred cccccHHHHHHHHHHHHHhHHHHHHHHHHHHhhccchhhcchhhhhhhhhhHhhhhHHHHHHHHHHHHhCCCCCHHHHHH Q lcl|Aclame:pro 303 ATLNNIEQQQQQFYTDTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARS 382 (429) Q Consensus 303 ~~~~n~~~~~~~~~~~~l~P~~~~i~~~l~~~ll~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~ 382 (429) ++++|.+++.++|++.||.|+++.|+++|+++||+..++..+++++||.+++++.|.+++++.+.+++++|++|+||+|+ T Consensus 227 ~~~~~~e~~~~~~~~~~l~P~~~~ie~~l~~~l~~~~~~~~g~~i~fd~~~l~~~d~~~~a~~~~~~~~~G~~T~NE~R~ 306 (348) T protein:vir:93 227 TNFAKNEELNRFYLQHTLLPIVKQYEEEFNRKLLTKTDREKNRYFKFNVKSYLRADSATQAEVYFKAVRSGYYTINDIRE 306 (348) T ss_pred CCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCcccccCcceEEeechhhhccCHHHHHHHHHHHHhCCCCCHHHHHH Confidence 99999999999999999999999999999999999999889999999999999999999999999999999999999999 Q ss_pred HhCCCCCCCcceeeecccccccccccccc--CCCCCCCCCCC Q lcl|Aclame:pro 383 KEDLPPEAGGDRLLVNGNMLPIDMAGQAY--LKGGDTNGEVS 422 (429) Q Consensus 383 ~~Gl~~~~~gD~~~~~~n~~~~~~~~~~~--~~~g~~~~~~~ 422 (429) ++|+||+||||++++++|++|++..++.+ .+||+++.++. T Consensus 307 ~~g~~p~~ggD~~~~~~n~~~~~~~~~~~~~~~gg~~n~~~~ 348 (348) T protein:vir:93 307 WEDLPPVEGGDKPLISGDLYPIDTPLELRKSLKGGDKNVNES 348 (348) T ss_pred HhCCCCCCCcCeEeecccccccccchhhcccccCCCCCcCCC Confidence 99999999999999999999998876543 45666655544 No 52 >protein:vir:104259 Length: 403 # NCBI annotation: portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:1504 # MgeName: T5 # Cross-refs: genbank:acc:YP_006980;genbank:gi:46401881;genbank:GeneID:2777676 Probab=100.00 E-value=1.4e-83 Score=474.86 Aligned_cols=391 Identities=18% Similarity=0.233 Sum_probs=318.3 Q ss_pred CchhhhhhcccccccccccccCCchHHHHHhhcCCCCcceechhhhhccHHHHHHHHHHHHhhccCceEEEecCCce--e Q lcl|Aclame:pro 1 MDSVKKFFNFEKRQTSQVIELNKDDEKLLEWLGISPSTISVKGKNALKVATVFACIKILSESVSKLPLKIYQEDEYG--I 78 (429) Q Consensus 1 Mg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~--~ 78 (429) |||++++.......+...... ..+ ...+......+.+.++++++|++||++||+.||++|+++++..... . T Consensus 1 mg~~~~~~~~~~~~~~~~~~~----~~~---~~~~~~~~~~t~~~~~~~~~v~~cv~~Ia~~ia~~p~~v~~~~~~~~~~ 73 (403) T protein:vir:10 1 MGFKSWITEKLNPGQRIIRDM----EPV---SHRTNRKPFTTGQAYSKIEILNRTANMVIDSAAECSYTVGDKYNIVTYA 73 (403) T ss_pred Ccchhhhhhccchhhhhhhcc----ccc---ccccCCcccccHHHHHHHHHHHHHHHHHHHHHhhCceeEeecccccccc Confidence 999987754322111100000 000 0111122224567788999999999999999999999998765422 2 Q ss_pred eeeecchhhhhhcccCcCCCCHHHHHHHHHHHHHhhCCeEEEEeeCCCCceEEEEeeCCcceEEEEcCCcceeeeeeEEE Q lcl|Aclame:pro 79 QRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVYIDDVGLLNSKTKMWY 158 (429) Q Consensus 79 ~~~~~~~~~~~l~~~PN~~~s~~~~~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~l~p~~v~~~~~~~~~~~~~~~~~~ 158 (429) .....|+++++|+.+||++||+++||+.++.+++++||||+++.+ .+|+++|++.|++..+.+... ++ T Consensus 74 ~~~~~~~l~~lL~~~PN~~~t~~~f~~~~~~~~ll~Gnayi~~~~------~~l~~l~~~~~~v~~~~~~~~------~~ 141 (403) T protein:vir:10 74 NGVKTKTLDTLLNVRPNPFMDISTFRRLVVTDLLFEGCAYIYWDG------TSLYHVPAALMQVEADANKFI------KK 141 (403) T ss_pred cccccchHHHHHhhCCCCCCCHHHHHHHHHHHHhhcCCeEEEEeC------ceeEeecCcceEEEEcCCceE------EE Confidence 334568999999999999999999999999999999999988743 369999999999987664322 11 Q ss_pred eecccCceEEEccceEEEeecCC----CCCcccccCHHHHHHHHHHHHHHHHHHHHHHHHccCCcceEEEeCCCCCHHHH Q lcl|Aclame:pro 159 VVNTGGQQRVLKPEEILHFKNGI----TLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGDLNEDAK 234 (429) Q Consensus 159 ~~~~~g~~~~~~~~evih~~~~~----~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~~e~~ 234 (429) ++..+ ...+.+++|+||+... +.++.+|+||+.++...+..+.++.++..++|+||++|+|+++.++.++++++ T Consensus 142 ~~~~~--~~~~~~~eiih~~~~~~~~~~~~~~~G~s~i~~~~~~i~~~~~~~~~~~~~f~ng~~~~gil~~~~~l~~e~~ 219 (403) T protein:vir:10 142 FIFNN--QINYRVDEIIFIKDNSYVCGTNSQISGQSRVATVIDSLEKRSKMLNFKEKFLDNGTVIGLILETDEILNKKLR 219 (403) T ss_pred EEecC--ceeecccceEEecccccccCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEeCCCCCHHHH Confidence 22222 2468899999999543 44778999999999999999999999999999999999999999999999999 Q ss_pred HHHHHHHHHHhcccccccceeecCCCceeEecCC--ChhHHHHHHHHHHHHHHHHHHhcCChhhcCCccccccccHHHHH Q lcl|Aclame:pro 235 KVFRENFESMSSGLQNSHRIALMPVGYQFQPISL--NMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKATLNNIEQQQ 312 (429) Q Consensus 235 ~~~~~~~~~~~~g~~~~~~~~vl~~g~~~~~~~~--~~~d~~~~e~~~~~~~~Ia~~fgvp~~~l~~~~~~~~~n~~~~~ 312 (429) ++++++|++.++|..|+|++++|++|++|+++++ ++.|+|++|.+++++++||++|||||.+|+. ++++|.+++. T Consensus 220 ~~~~~~~~~~~~g~~n~g~~~vl~~g~~~~~~~~~~~~~d~q~~e~~~~~~~~Ia~~fgVPp~~lg~---~~~sn~e~~~ 296 (403) T protein:vir:10 220 ERKQEELQLDYNPSTGQSSVLILDGGMKAKPYSQISSFKDLDFKEDIEGFNKSICLAFGVPQVLLDG---GNNANIRPNI 296 (403) T ss_pred HHHHHHHHHHhCCcccCcceeecCCCceeEEecccCCHHHHHHHHHHHHHHHHHHHHhCCCHHHcCC---CCCcCHHHHH Confidence 9999999999999999999999999999999975 6789999999999999999999999999974 4688999999 Q ss_pred HHHHHHHHhHHHHHHHHHHHHhhccchhhcchhhhhhhhhhH--hhhhHHHHHHHHHHHHhCCCCCHHHHHHHhCCCCCC Q lcl|Aclame:pro 313 QQFYTDTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAI--LRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEA 390 (429) Q Consensus 313 ~~~~~~~l~P~~~~i~~~l~~~ll~~~~~~~~~~~~fd~~~l--~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~Gl~~~~ 390 (429) +.|++.||.|+++.|+++|+++| +.+++||++.+ ++.|.+++++++.+++++|++|+||+|+++|+||+| T Consensus 297 ~~f~~~tl~P~~~~ie~~l~~~L--------~~~~~~d~~~~~~l~~D~~~~~~~~~~~~~~G~lT~NE~R~~~gl~pi~ 368 (403) T protein:vir:10 297 ELFYYMTIIPMLNKLTSSLTFFF--------GYKITPNTKEVAALTPDKEAEAKHLTSLVNNGIITGNEARSELNLEPLD 368 (403) T ss_pred HHHHHHHHHHHHHHHHHHHHHhc--------CceeeeccchhhhcccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCC Confidence 99999999999999999999986 24577777755 888999999999999999999999999999999995 Q ss_pred --CcceeeeccccccccccccccCCCCCCCCCCCCCCCCCC Q lcl|Aclame:pro 391 --GGDRLLVNGNMLPIDMAGQAYLKGGDTNGEVSKEGNEGN 429 (429) Q Consensus 391 --~gD~~~~~~n~~~~~~~~~~~~~~g~~~~~~~~~~~~~n 429 (429) +||++++|+|+..... ..++|+.. .++.++||| T Consensus 369 ~~~~d~~~~p~n~~~~~~----~~~~~e~~--~~~~~~~g~ 403 (403) T protein:vir:10 369 DEQMNKIRIPANVAGSAT----GVSGQEGG--RPKGSTEGD 403 (403) T ss_pred cccccccccccccccccc----cCCCCcCC--CCCCCcCCC Confidence 7999999999865432 22333333 356677777 No 53 >protein:vir:6210 Length: 394 # NCBI annotation: Portal protein # Family: family:all:10882 # MgeID: mge:128 # MgeName: phBC6A52 # Cross-refs: genbank:acc:NP_852590;genbank:gi:31415850;genbank:GeneID:1489208 Probab=100.00 E-value=2.1e-83 Score=473.85 Aligned_cols=384 Identities=18% Similarity=0.259 Sum_probs=312.2 Q ss_pred CchhhhhhcccccccccccccCCchHHHHHhhc--CCCCcceechhhhhccHHHHHHHHHHHHhhccCceEEEecCCcee Q lcl|Aclame:pro 1 MDSVKKFFNFEKRQTSQVIELNKDDEKLLEWLG--ISPSTISVKGKNALKVATVFACIKILSESVSKLPLKIYQEDEYGI 78 (429) Q Consensus 1 Mg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~~ 78 (429) ||||++|+++..+..... ..+.++++ .+.+...++.+.|+++++|++||++||+.||++||++++++++ T Consensus 1 MGl~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~vt~~~al~~~~v~~~i~~Ia~~iA~lp~~v~~~~g~-- 71 (394) T protein:vir:62 1 MGLRDRFSNYLFKKAEKR-------GYLDNVLGKSIRYSGVYVTDSNILQSSDVYELLQDISNQMVLADIVVEDEFGN-- 71 (394) T ss_pred CchhhhhhhhccCCCCch-------hhhhhhhhcccccCccccChhhhhccHHHHHHHHHHHHhhcccceEEEcCCCc-- Confidence 999999987654433221 12223333 3345567889999999999999999999999999999986553 Q ss_pred eeeecchhhhhhcccCcCCCCHHHHHHHHHHHHHhhCCeEEEEeeCCCCceEEEEeeCCcceEEEEcCCcceeeeeeEEE Q lcl|Aclame:pro 79 QRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVYIDDVGLLNSKTKMWY 158 (429) Q Consensus 79 ~~~~~~~~~~~l~~~PN~~~s~~~~~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~l~p~~v~~~~~~~~~~~~~~~~~~ 158 (429) ....|+++.|+ .+||++||+++||+.++.+++++||+|+++.++..+. +..|++..++.. . + T Consensus 72 -~~~~~~~~~Ll-~~PN~~~t~~~f~~~~~~~lll~Gn~~~~i~~~~~~~--------~~~~~~~~~~~~------~--~ 133 (394) T protein:vir:62 72 -EIKDDIALQIL-RNPNNYLTQSEFIKLMTNTYLLEGETFPILNGAQIHL--------ASNVFTELDDNL------V--E 133 (394) T ss_pred -ccchhhHHHHh-ccCCCCCCHHHHHHHHHHHHHhcCCeEEEEecceeec--------cccceEEECCce------E--E Confidence 23457776665 5899999999999999999999999999987654332 234555554421 1 1 Q ss_pred eecccCceEEEccceEEEeecCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHHccCCcceEEEeCCCCC--HHHHHH Q lcl|Aclame:pro 159 VVNTGGQQRVLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGDLN--EDAKKV 236 (429) Q Consensus 159 ~~~~~g~~~~~~~~evih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~--~e~~~~ 236 (429) .+..++ +.|+++||||+|.++ .++++|+||+..+..++....+++++..++|+||++|+|+++++...+ +++.++ T Consensus 134 ~~~~~~--~~~~~~eiih~r~~~-~d~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~il~~~~~~~~~~~~~~~ 210 (394) T protein:vir:62 134 HFNIGG--HEIPPCMIRHVKNIG-ADHLRGKGILDLGRDTLEGVMSAEKTLTDKYKKGGLLTFLLNLDAHINPQNGAQSK 210 (394) T ss_pred EEeeCC--EEechhheEEecCcC-CCCccccChHHHHHHHHHHHHHHHHHHHHHHHccCCcceEEEeCCCCCcCHHHHHH Confidence 222233 679999999999664 677899999999999999999999999999999999999999988775 556789 Q ss_pred HHHHHHHHhcccccccceeecCCCc--eeEecCCChhHHHHHHHHHHHHHHHHHHhcCChhhcCCccccccccHHHHHHH Q lcl|Aclame:pro 237 FRENFESMSSGLQNSHRIALMPVGY--QFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKATLNNIEQQQQQ 314 (429) Q Consensus 237 ~~~~~~~~~~g~~~~~~~~vl~~g~--~~~~~~~~~~d~~~~e~~~~~~~~Ia~~fgvp~~~l~~~~~~~~~n~~~~~~~ 314 (429) +++.|++.++|..++|+++|++.|. ++++++.++.|+|++|.+++++++||++|||||.+|++. +++|.+++.+. T Consensus 211 ~~~~~~~~~~g~~n~g~~~vl~~g~~~~~~~l~~~~~d~q~~e~~~~~~~~Ia~~fgVPp~~lg~~---~~sn~e~~~~~ 287 (394) T protein:vir:62 211 LINAILDQLESIDEARSVKMIPLGKGYSIDTLKSPLDDEKTLAYLNVYKKDLGKFLGINVDTYTEL---IKEDIEKAMMY 287 (394) T ss_pred HHHHHHHHhccccccCceeEeeCCCceeEEecCCCcchHHHHHHHHHHHHHHHHHhCCCHHHcCCC---CCcCHHHHHHH Confidence 9999999999999999999997765 666889999999999999999999999999999999853 57899999999 Q ss_pred HHHHHHhHHHHHHHHHHHHhhccchhhcchhhhhhhhhhHhhhhHHHHHHHHHHHHhCCCCCHHHHHHHhCCCCC--CCc Q lcl|Aclame:pro 315 FYTDTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPE--AGG 392 (429) Q Consensus 315 ~~~~~l~P~~~~i~~~l~~~ll~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~Gl~~~--~~g 392 (429) |+++||.|++++||++|++++|++.+. .+++++||...++..+ ++++++.+++++|++|+||+|+++|+||+ |+| T Consensus 288 ~~~~~l~P~~~~ie~~l~~kll~~~~~-~~~~~~fd~~~~~~~~--~~~~~~~~~~~~g~~T~NE~R~~~gl~p~~~~~g 364 (394) T protein:vir:62 288 IHNKAVRPIMKNFEDHLSLLFYAQNSG-KRIKFKINILDFVTYS--NKTNIGYNLVRTAITSPDNVADMLGFPKQNTKES 364 (394) T ss_pred HHHHHHHHHHHHHHHHHhhhhcCcccc-CceEEEechhhhcCHH--HHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCC Confidence 999999999999999999999988654 5678888888776554 67788999999999999999999999998 689 Q ss_pred ceeeeccccccccccc--cccCCCCCCCCC Q lcl|Aclame:pro 393 DRLLVNGNMLPIDMAG--QAYLKGGDTNGE 420 (429) Q Consensus 393 D~~~~~~n~~~~~~~~--~~~~~~g~~~~~ 420 (429) |++++++|+.|++... +.+.+||++++. T Consensus 365 d~~~~~~n~~~~~~~~~~~~~~kgge~~en 394 (394) T protein:vir:62 365 QAIYISNDVTEIGKKEATDGSLGGGEENEN 394 (394) T ss_pred CeeecccccccccccccccccCCCCCCCCC Confidence 9999999999887542 222333333222 No 54 >protein:vir:100187 Length: 385 # NCBI annotation: putative portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:1524 # MgeName: phi AT3 # Cross-refs: genbank:acc:YP_025029;genbank:gi:48697262;genbank:GeneID:2948285 Probab=100.00 E-value=4.8e-81 Score=460.94 Aligned_cols=377 Identities=19% Similarity=0.240 Sum_probs=312.3 Q ss_pred CchhhhhhcccccccccccccCCchHHHHHhhcCCCCcceechhhhhccHHHHHHHHHHHHhhccCceEEEecCCceeee Q lcl|Aclame:pro 1 MDSVKKFFNFEKRQTSQVIELNKDDEKLLEWLGISPSTISVKGKNALKVATVFACIKILSESVSKLPLKIYQEDEYGIQR 80 (429) Q Consensus 1 Mg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~~~~ 80 (429) ||||+++. +.++... ... ......+...+....+...++.+.|+++++|++||++||++||++||++++ T Consensus 1 Mg~~~~~~-~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~v~~~~al~~~~v~~~i~~ia~~ia~~p~~v~~-------- 69 (385) T protein:vir:10 1 MGLLTPRN-FNKRKAK-NMV-YPSNPAFFTTTVGGMQLSYVSALSALQNTNVYSVINRIASDVASAHFKTEN-------- 69 (385) T ss_pred Cccccchh-ccccccc-ccc-cccchhhhhhhccccCccccCHHHhhccHHHHHHHHHHHHHHhhCceeeec-------- Confidence 99998653 2222221 111 122233344444444556788899999999999999999999999999974 Q ss_pred eecchhhhhhcccCcCCCCHHHHHHHHHHHHHhhCCeEEEEeeCCCCceEEEEeeCCcceEEEEcCCcceeeeeeEEEee Q lcl|Aclame:pro 81 GTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVYIDDVGLLNSKTKMWYVV 160 (429) Q Consensus 81 ~~~~~~~~~l~~~PN~~~s~~~~~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~l~p~~v~~~~~~~~~~~~~~~~~~~~ 160 (429) |+...+|+ +||++||+++||+.++.+++++||||++++++ ..+++|+++.+|++..+.... .+++.. T Consensus 70 ---~~~~~ll~-~PN~~~t~~~f~~~~~~~l~l~Gn~~~~i~r~----~~~~~p~~~~~v~~~~~~~~~-----~~~~~~ 136 (385) T protein:vir:10 70 ---TATLNRLE-SPSSLIGRFSFWQGALMQLCLSGNDYIPLVGQ----NLEHIPNSDVQINYLPGNMGI-----VYTVLE 136 (385) T ss_pred ---cchhhhhh-cCCCCCCHHHHHHHHHHHhhhcCCeEEEEEcC----ceeEeecCCceEEEEEcCCce-----EEEEEE Confidence 45566775 89999999999999999999999999999875 467889999888887766432 233444 Q ss_pred cccCceEEEccceEEEeecCCC--CCcccccCHHHHHHHHHHHHHHHHHHHHHHHHccCCcceEEEeCCCC-CHHHHHHH Q lcl|Aclame:pro 161 NTGGQQRVLKPEEILHFKNGIT--LDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGDL-NEDAKKVF 237 (429) Q Consensus 161 ~~~g~~~~~~~~evih~~~~~~--~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~-~~e~~~~~ 237 (429) ..++..+.|+++||||||+.++ .++.+|+||+.++...+.+..+++++..++|+||++|+|++++++.. ++++.+++ T Consensus 137 ~~~~~~~~~~~~eiihik~~~~~~~~~~~G~s~i~~~~~~i~~~~~~~~~~~~~~~ng~~~~gil~~~~~~~~~e~~~~~ 216 (385) T protein:vir:10 137 SNDRPQMVLRQDQMLHFRLMPDPQYRYLIGRSPLESLQNALNLDDKASKSNMSAMENQINPAGKLTISNYLSDGKDLESA 216 (385) T ss_pred cCCceEEEEccccEEEeccCCCCcccccccccHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEeCCCCCCHHHHHHH Confidence 5667788899999999997654 45778999999999999999999999999999999999999999776 57899999 Q ss_pred HHHHHHHhcccccccceeecCCCceeEecCCChhHHHHH-HHHHHHHHHHHHHhcCChhhcCCc--cccccccHHHHHHH Q lcl|Aclame:pro 238 RENFESMSSGLQNSHRIALMPVGYQFQPISLNMSDAQFL-ENTELTIRQIATAFGIKMHQLNDL--SKATLNNIEQQQQQ 314 (429) Q Consensus 238 ~~~~~~~~~g~~~~~~~~vl~~g~~~~~~~~~~~d~~~~-e~~~~~~~~Ia~~fgvp~~~l~~~--~~~~~~n~~~~~~~ 314 (429) ++.|++.++| .|+|+++++++|++|++++.++.|++++ |.+++++++||++|||||.+|++. +.++++|.+++.. T Consensus 217 ~~~~~~~~~~-~n~~~~~vl~~g~~~~~l~~~~~d~~~l~e~~~~~~~~Ia~~fgVp~~~lg~~~~~~~~~sn~eq~~~- 294 (385) T protein:vir:10 217 REEFEKANTG-DNSGRLMVLPDGFDYTQLEMKTDVFKALADNSAYSADQISKAFGVPSDILGGGTSTESQHSNIDQIKA- 294 (385) T ss_pred HHHHHHHhCc-cccCCccccCCCceEEecCCChhHHHHHHHHHHHHHHHHHHHhCCCHHHcCCccCCCcccccHHHHHH- Confidence 9999999987 6899999999999999999999999975 999999999999999999999864 4567899987654 Q ss_pred HHHHHHhHHHHHHHHHHHHhhccchhhcchhhhhhhhhhHhhhhHHHHHHHHHHHHhCCCCCHHHHHHHhCCCCCCC--c Q lcl|Aclame:pro 315 FYTDTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEAG--G 392 (429) Q Consensus 315 ~~~~~l~P~~~~i~~~l~~~ll~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~Gl~~~~~--g 392 (429) ++..||.|+++.|+++|+++++.. +++||++.+++.|.+++++.+.+++++|++|+||+|+++|++|+|+ + T Consensus 295 ~~~~~l~P~~~~ie~~l~~~l~~~-------~~~f~~~~ll~~d~~~~~~~~~~~~~~G~~T~NE~R~~~g~~p~p~~~~ 367 (385) T protein:vir:10 295 TYLANLNSYVNPIVDELRLKMNAP-------DLELDIKDMLDVDDSALINQVSNLAKSGVLGAEQAQFILTRSGFLPDNL 367 (385) T ss_pred HHHHHHHHHHHHHHHHHHHhhCCc-------eEEeechhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCccCCCCC Confidence 556799999999999999998754 4899999999999999999999999999999999999999999964 5 Q ss_pred ceeeeccccccccccccccCCCCCCCCC Q lcl|Aclame:pro 393 DRLLVNGNMLPIDMAGQAYLKGGDTNGE 420 (429) Q Consensus 393 D~~~~~~n~~~~~~~~~~~~~~g~~~~~ 420 (429) |.+.++.+. .++|+++++ T Consensus 368 ~~~~~~~~~----------~~~g~~~dn 385 (385) T protein:vir:10 368 PEFKPLTTQ----------VKGGDEGDN 385 (385) T ss_pred ccccCcccc----------cCCCCCCCC Confidence 666655552 345555544 No 55 >protein:vir:80796 Length: 574 # NCBI annotation: putative portal protein # Family: family:all:2446 # MgeID: mge:1885 # MgeName: phiEF24C # Cross-refs: genbank:acc:YP_001504121;genbank:gi:158079308;genbank:GeneID:5666445 Probab=100.00 E-value=1.1e-80 Score=458.92 Aligned_cols=424 Identities=17% Similarity=0.189 Sum_probs=317.3 Q ss_pred Cchhh---hhhcccc--------------ccccccc-------------ccCCchHHHHHhhcCCCCcceechhhhhccH Q lcl|Aclame:pro 1 MDSVK---KFFNFEK--------------RQTSQVI-------------ELNKDDEKLLEWLGISPSTISVKGKNALKVA 50 (429) Q Consensus 1 Mg~~~---~~~~~~~--------------~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~ 50 (429) |++-. +..+... +.-.+.. +...+...+...+.......-+..--.+... T Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~iv~~~i~~~~~ 106 (574) T protein:vir:80 27 MHLREIDTNVVNNEPYSMESIEKGMNGKTTAYMQPIIGEMSVNPGYKTKPSIRNSQDLHKTLKKFGNNIILNAIINTRSN 106 (574) T ss_pred cccchhhhhhhhccCCCHHHHHHhHhhhcccccchhhhhccccccccCcCccCCcccHHHHHHhhccChhHHHHHHHHHH Confidence 44311 1111000 0000000 0000000111111111111111122234567 Q ss_pred HHHHHHHHHHHhhccCceEEEecCCce----eeeeecchhhhhhcc---cCcCCC-CHHHHHHHHHHHHHhhCCeEEEEe Q lcl|Aclame:pro 51 TVFACIKILSESVSKLPLKIYQEDEYG----IQRGTKHYLNNLLRL---RPNPYM-SSMNFFGSLEAQKNLYGNSYANIE 122 (429) Q Consensus 51 ~v~~~i~~ia~~ia~~~~~~~~~~~~~----~~~~~~~~~~~~l~~---~PN~~~-s~~~~~~~~~~~~l~~G~~~~~~~ 122 (429) .|++|+.+|+..+|++||+|+.++.+. +.....|+++.+|.. .|||++ ++.+|++.++.+++++||+|++++ T Consensus 107 ~V~~~~~~i~~~ia~lp~~i~~kd~~~~~~~~~~~~~~~l~~ll~~~~~~~nP~~~s~~ef~~~lv~~lll~Gnayi~i~ 186 (574) T protein:vir:80 107 QVSMYCKPARNSETGVGYEIRLKDIEAEPTSHDIANIKRIESFLENTAQFRDPNRDNFTTFCKKLVRATYMYDQVNFEKV 186 (574) T ss_pred HHHHHHHHHHhhhccCceEEEEeccCCCccchhhhhhhHHHHHHhccCCCCCCccccHHHHHHHHHHHHHhcCCeEEEEE Confidence 789999999999999999999876543 233556888888753 355654 888999999999999999999999 Q ss_pred eCCCCceEEEEeeCCcceEEEEcCCcceeeeeeEEEeecccCceEEEccceEEEeecCCCC---CcccccCHHHHHHHHH Q lcl|Aclame:pro 123 FDRKGKVQALWPIDASKVTVYIDDVGLLNSKTKMWYVVNTGGQQRVLKPEEILHFKNGITL---DGLVGVPTMEYLKSTL 199 (429) Q Consensus 123 ~~~~g~~~~l~~l~p~~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~evih~~~~~~~---~~~~G~s~~~~~~~~i 199 (429) ++..|++.+||||+|++|++..+.++........+|.+..++....|+++|||||+++... .+.+|+||+.++...+ T Consensus 187 r~~~G~~~~L~pl~p~~V~v~~d~~~~~~~~~~~y~~~~~g~~~~~~~~~eiih~~~~~~~~~~~~~~G~spi~~a~~~i 266 (574) T protein:vir:80 187 FDKDGNFIKFDTVDPTTIFLATNGEGKLIKNGERFVQVIDNRIVAKFNERELAFAVRNPRADIEVGQYGYPELEIALKQF 266 (574) T ss_pred ECCCCcEEEEEEEcCceeEEEEcCccccccCceEEEEEeCCceEEEEccccEEEEeccCCCCcccccccccHHHHHHHHH Confidence 9999999999999999999999887765555566777777788889999999999965443 3568999999999999 Q ss_pred HHHHHHHHHHHHHHHccCCcceEEEeCC--CCCHHHHHHHHHHHHHHhccccccccee-ecCCCceeEecCCChhHHHHH Q lcl|Aclame:pro 200 ENSASADKFINNFYKQGLQVKGLVQYVG--DLNEDAKKVFRENFESMSSGLQNSHRIA-LMPVGYQFQPISLNMSDAQFL 276 (429) Q Consensus 200 ~~~~~~~~~~~~~~~ng~~~~~~~~~~~--~~~~e~~~~~~~~~~~~~~g~~~~~~~~-vl~~g~~~~~~~~~~~d~~~~ 276 (429) ..+.++++++.++|+||++|+|+|+++. .+++++++++++.|++.++|..|+|+++ ++++|++|+++++++.|++|+ T Consensus 267 ~~~~~a~~~~~~~f~ng~~p~gil~~~~~~~ls~e~~~~lk~~~~~~~~G~~n~g~~~vl~~~G~~~~~l~~s~~D~qfl 346 (574) T protein:vir:80 267 IAHENTEVFNDRFFSHGGTTRGILHVKTGQQQSQQALDIFRREWRSSLAGINGSWQIPVVSAEDVKFVNMTPSANDMQFE 346 (574) T ss_pred HHHHHHHHHHHHHHhccCCCceEEEeCCCCCCCHHHHHHHHHHHHHHhccccccccceeecCCCceEEEccCChhHHHHH Confidence 9999999999999999999999999864 4799999999999999999999999975 457899999999999999999 Q ss_pred HHHHHHHHHHHHHhcCChhhcCCccc----------cccccHHHHHHHHHHHHHhHHHHHHHHHHHHhhccchhhcchhh Q lcl|Aclame:pro 277 ENTELTIRQIATAFGIKMHQLNDLSK----------ATLNNIEQQQQQFYTDTLQATLTMYEQEMTYKLFLDSELDKGFY 346 (429) Q Consensus 277 e~~~~~~~~Ia~~fgvp~~~l~~~~~----------~~~~n~~~~~~~~~~~~l~P~~~~i~~~l~~~ll~~~~~~~~~~ 346 (429) |++++++++||++|||||.+||..+. .+++|.+++.+.|++.||.|++..||++||++|+... ..+++ T Consensus 347 e~~~~~~~~Ia~afgVPp~~lG~~~~~t~~gs~~~~~n~sn~E~~~~~f~~~tL~P~~~~ie~~ln~~Ll~~~--~~~~~ 424 (574) T protein:vir:80 347 KWLNYLINVISALYGIDPAEINFPNNGGATGSKGGSLNEGNSKEKMQASQNKGLQPLLRFIEDTVNTYIVAEF--GEKYQ 424 (574) T ss_pred HHHHHHHHHHHHHhCCCHHHhcccccccccccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhc--CCceE Confidence 99999999999999999999987554 4679999999999999999999999999999998654 45678 Q ss_pred hhhhhhhHhhhhHHHHHHHHHHHHhCCCCCHHHHHHHhCCCCCCCcceeeeccccccccccccccCC------------- Q lcl|Aclame:pro 347 SKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEAGGDRLLVNGNMLPIDMAGQAYLK------------- 413 (429) Q Consensus 347 ~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~Gl~~~~~gD~~~~~~n~~~~~~~~~~~~~------------- 413 (429) ++|+..+++..+...+ +..++.+|+||+||+|+++||||+||||++++|+|+.+++...+.... T Consensus 425 ~~f~~~d~~~~~~~~~---~~~~~~~G~lT~NE~R~~lgl~Pi~gGD~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~ 501 (574) T protein:vir:80 425 FQFRGGDLSAQLDKLK---IIEQEGKVFRTVNEIRHDKGLEPIKGGDVILNGVHIQAIGQALQEEQLEYQRSQDRLNRLL 501 (574) T ss_pred EEecccchhhHHHHHH---HHHHHhCCccCHHHHHHHhCCCCCCCCCEeeeccceeecccccccccCCccchhccccccc Confidence 8998877765443322 245678999999999999999999999999999999888765322110 Q ss_pred --CCCCCC-----CCCCCCCCCC Q lcl|Aclame:pro 414 --GGDTNG-----EVSKEGNEGN 429 (429) Q Consensus 414 --~g~~~~-----~~~~~~~~~n 429 (429) .+..++ +++...+|+. T Consensus 502 ~~~~~~~~~~~~~~p~~~~~d~~ 524 (574) T protein:vir:80 502 ELSGGDVEQPEPEEPKDSQNDTD 524 (574) T ss_pred cccCCCCCCCCCCCCCCcccccc Confidence 000000 0111111111 No 56 >protein:vir:9507 Length: 395 # NCBI annotation: hypothetical protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:170 # MgeName: phiN315 # Cross-refs: genbank:acc:NP_835554;genbank:gi:30043953;genbank:GeneID:1260535 Probab=100.00 E-value=1.1e-80 Score=458.92 Aligned_cols=385 Identities=15% Similarity=0.153 Sum_probs=311.0 Q ss_pred CchhhhhhcccccccccccccCCchHHHHHhhcCCCCcceechhhhhccHHHHHHHHHHHHhhccCceEEEecCCceeee Q lcl|Aclame:pro 1 MDSVKKFFNFEKRQTSQVIELNKDDEKLLEWLGISPSTISVKGKNALKVATVFACIKILSESVSKLPLKIYQEDEYGIQR 80 (429) Q Consensus 1 Mg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~~~~ 80 (429) ||||+++|+..+.. .. .. .......++...++++++|++||++||+++|++|+++++++. T Consensus 1 Mg~f~~lf~~~~~~---~~--~~----------~~~~~~~v~~~~~~~~~~v~~~i~~Ia~~iA~~p~~~~~~~~----- 60 (395) T protein:vir:95 1 MSILEKIFKTRKDI---TY--ML----------DLDMIEDLSQQAYVKRLAIDSCIEFVARAVAQSHFKVLEGNR----- 60 (395) T ss_pred CchhhhhhccCccc---cc--cc----------cchhccccchhhhhhhHHHHHHHHHHHHhhccceeEeccCCc----- Confidence 99999998742211 00 00 112334567788999999999999999999999999997543 Q ss_pred eecchhhhhhcccCcCCCCHHHHHHHHHHHHHhhCCeEEEEeeCCCCceEEEEeeCCcceEEEEcCCcceeeeeeEEEee Q lcl|Aclame:pro 81 GTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVYIDDVGLLNSKTKMWYVV 160 (429) Q Consensus 81 ~~~~~~~~~l~~~PN~~~s~~~~~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~l~p~~v~~~~~~~~~~~~~~~~~~~~ 160 (429) ...|+++++|+.+||++||+++||+.++.++++.|++|+++.++. .++++++..+++....+. ....+.. T Consensus 61 ~~~~~~~~ll~~~PN~~~t~~~f~~~~~~~lll~g~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~-----~~~~~~~ 130 (395) T protein:vir:95 61 IQKNDVYYKLNIKPNTDLSSDSFWQQVIYKLIYDNEVLIVVSDSK-----ELLIADSFYREEYALYDD-----IFKDVTV 130 (395) T ss_pred cccchHHHHHHhccCcCCCHHHHHHHHHHHHhhCCceEEEEecCC-----CeEecCCccceeEeecCc-----ceeEEEE Confidence 446899999999999999999999999999999999988775542 356776666655443321 1222333 Q ss_pred cccCceEEEccceEEEeecCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHHccCCcceEEEeCCC-CCHHHHHHHHH Q lcl|Aclame:pro 161 NTGGQQRVLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGD-LNEDAKKVFRE 239 (429) Q Consensus 161 ~~~g~~~~~~~~evih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~-~~~e~~~~~~~ 239 (429) ...+..+.++++||||++++++.+..+|.||+.++...+.... +.|.+++.++|++..+.. .++++.+++++ T Consensus 131 ~~~~~~~~~~~~evih~~~~~~~~~~~G~spi~~~~~~~~~~~-------~~~~~~~~~~gii~~~~~~~~~e~~~~~~~ 203 (395) T protein:vir:95 131 KDYTYQRTFTMQEVIYLKYNNNKVTHFVESLFEDYGKIFGRMI-------GAQLKNYQIRGILKSASSAYDEKNIEKLQA 203 (395) T ss_pred cCceeeeeeccccEEEEccCCCCcccccchHHHHHHHHHHHHH-------HHHHhcCCCceEEEeCCCCCCHHHHHHHHH Confidence 4445567899999999999888888999999999988776544 346788889999988765 58999999999 Q ss_pred HHHHHhcccccccc--eeecCCCceeEecCCChhHH-----HHHHHHHHHHHHHHHHhcCChhhcCCccccccccHHHHH Q lcl|Aclame:pro 240 NFESMSSGLQNSHR--IALMPVGYQFQPISLNMSDA-----QFLENTELTIRQIATAFGIKMHQLNDLSKATLNNIEQQQ 312 (429) Q Consensus 240 ~~~~~~~g~~~~~~--~~vl~~g~~~~~~~~~~~d~-----~~~e~~~~~~~~Ia~~fgvp~~~l~~~~~~~~~n~~~~~ 312 (429) .|++.+++.. +++ ++++++|++|++++++|.++ ||+|.+++++++||++|||||.+|+ ++++|.+++. T Consensus 204 ~~~~~~~~~~-~~~~~v~~l~~g~~~~~l~~~~~~~~~~~~q~~e~~~~~~~~Ia~~f~VPp~~l~----~~~sn~e~~~ 278 (395) T protein:vir:95 204 FTNKLFNTFN-KNQLAIAPLIEGFDYEELSNGGKNSNMPFSELSELMRDAIKNVALMIGIPPGLIY----GETADLEKNT 278 (395) T ss_pred HHHHHhcccc-ccCcceEEcCCCceeeeccccccccchhHHHHHHHHHHHHHHHHHHhCCCHHHhc----CcccCHHHHH Confidence 9999988753 344 55689999999999988765 8999999999999999999999996 4789999999 Q ss_pred HHHHHHHHhHHHHHHHHHHHHhhccchhhcchhhhhhhhhhHhhhhHHHHHHHHHHHHhCCCCCHHHHHHHhCCCCCCCc Q lcl|Aclame:pro 313 QQFYTDTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEAGG 392 (429) Q Consensus 313 ~~~~~~~l~P~~~~i~~~l~~~ll~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~Gl~~~~~g 392 (429) ++|++++|.|++.+||++|+++|+++.++..+ ++||++.+++.|.+++++++.+++++|++|+||+|+++|+||+|+| T Consensus 279 ~~~~~~~l~P~~~~ie~~l~~kL~~~~~~~~~--~~f~~~~l~~~D~~~~~~~~~~~~~~G~lt~NE~R~~~g~~p~~~g 356 (395) T protein:vir:95 279 LVFEKFCLTPLLKKIQNELNAKLITQSMYLKD--TRIEIVGVNKKDPLQYAEAIDKLVSSGSFTRNEVRIMLGEEPSDNP 356 (395) T ss_pred HHHHHHHHHHHHHHHHHHHHHhhcChhhhccc--ceecchhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCC Confidence 99999999999999999999999988775554 5788899999999999999999999999999999999999999765 Q ss_pred --ceeeeccccccccccccccCCCCCCCCCCCCCCCCCC Q lcl|Aclame:pro 393 --DRLLVNGNMLPIDMAGQAYLKGGDTNGEVSKEGNEGN 429 (429) Q Consensus 393 --D~~~~~~n~~~~~~~~~~~~~~g~~~~~~~~~~~~~n 429 (429) |++++|+|++|++...+...++.+.+.+...+.+.|| T Consensus 357 ~~d~~~~~~n~~~~~~~~~~~~~~~~~~~kgg~~~~~g~ 395 (395) T protein:vir:95 357 ELDEYLITKNYEKANSGENDEKEKDENTLKGGDEDESGD 395 (395) T ss_pred CCceeeeccccccccccccccCcccccccCCCCCCCCCC Confidence 9999999999998776655444444433333333444 No 57 >protein:vir:100650 Length: 395 # NCBI annotation: 77ORF008 # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:1476 # MgeName: 77 # Cross-refs: genbank:acc:NP_958604;genbank:gi:41189523;genbank:GeneID:2743796 Probab=100.00 E-value=1.1e-80 Score=458.92 Aligned_cols=385 Identities=15% Similarity=0.153 Sum_probs=311.0 Q ss_pred CchhhhhhcccccccccccccCCchHHHHHhhcCCCCcceechhhhhccHHHHHHHHHHHHhhccCceEEEecCCceeee Q lcl|Aclame:pro 1 MDSVKKFFNFEKRQTSQVIELNKDDEKLLEWLGISPSTISVKGKNALKVATVFACIKILSESVSKLPLKIYQEDEYGIQR 80 (429) Q Consensus 1 Mg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~~~~ 80 (429) ||||+++|+..+.. .. .. .......++...++++++|++||++||+++|++|+++++++. T Consensus 1 Mg~f~~lf~~~~~~---~~--~~----------~~~~~~~v~~~~~~~~~~v~~~i~~Ia~~iA~~p~~~~~~~~----- 60 (395) T protein:vir:10 1 MSILEKIFKTRKDI---TY--ML----------DLDMIEDLSQQAYVKRLAIDSCIEFVARAVAQSHFKVLEGNR----- 60 (395) T ss_pred CchhhhhhccCccc---cc--cc----------cchhccccchhhhhhhHHHHHHHHHHHHhhccceeEeccCCc----- Confidence 99999998742211 00 00 112334567788999999999999999999999999997543 Q ss_pred eecchhhhhhcccCcCCCCHHHHHHHHHHHHHhhCCeEEEEeeCCCCceEEEEeeCCcceEEEEcCCcceeeeeeEEEee Q lcl|Aclame:pro 81 GTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVYIDDVGLLNSKTKMWYVV 160 (429) Q Consensus 81 ~~~~~~~~~l~~~PN~~~s~~~~~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~l~p~~v~~~~~~~~~~~~~~~~~~~~ 160 (429) ...|+++++|+.+||++||+++||+.++.++++.|++|+++.++. .++++++..+++....+. ....+.. T Consensus 61 ~~~~~~~~ll~~~PN~~~t~~~f~~~~~~~lll~g~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~-----~~~~~~~ 130 (395) T protein:vir:10 61 IQKNDVYYKLNIKPNTDLSSDSFWQQVIYKLIYDNEVLIVVSDSK-----ELLIADSFYREEYALYDD-----IFKDVTV 130 (395) T ss_pred cccchHHHHHHhccCcCCCHHHHHHHHHHHHhhCCceEEEEecCC-----CeEecCCccceeEeecCc-----ceeEEEE Confidence 446899999999999999999999999999999999988775542 356776666655443321 1222333 Q ss_pred cccCceEEEccceEEEeecCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHHccCCcceEEEeCCC-CCHHHHHHHHH Q lcl|Aclame:pro 161 NTGGQQRVLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGD-LNEDAKKVFRE 239 (429) Q Consensus 161 ~~~g~~~~~~~~evih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~-~~~e~~~~~~~ 239 (429) ...+..+.++++||||++++++.+..+|.||+.++...+.... +.|.+++.++|++..+.. .++++.+++++ T Consensus 131 ~~~~~~~~~~~~evih~~~~~~~~~~~G~spi~~~~~~~~~~~-------~~~~~~~~~~gii~~~~~~~~~e~~~~~~~ 203 (395) T protein:vir:10 131 KDYTYQRTFTMQEVIYLKYNNNKVTHFVESLFEDYGKIFGRMI-------GAQLKNYQIRGILKSASSAYDEKNIEKLQA 203 (395) T ss_pred cCceeeeeeccccEEEEccCCCCcccccchHHHHHHHHHHHHH-------HHHHhcCCCceEEEeCCCCCCHHHHHHHHH Confidence 4445567899999999999888888999999999988776544 346788889999988765 58999999999 Q ss_pred HHHHHhcccccccc--eeecCCCceeEecCCChhHH-----HHHHHHHHHHHHHHHHhcCChhhcCCccccccccHHHHH Q lcl|Aclame:pro 240 NFESMSSGLQNSHR--IALMPVGYQFQPISLNMSDA-----QFLENTELTIRQIATAFGIKMHQLNDLSKATLNNIEQQQ 312 (429) Q Consensus 240 ~~~~~~~g~~~~~~--~~vl~~g~~~~~~~~~~~d~-----~~~e~~~~~~~~Ia~~fgvp~~~l~~~~~~~~~n~~~~~ 312 (429) .|++.+++.. +++ ++++++|++|++++++|.++ ||+|.+++++++||++|||||.+|+ ++++|.+++. T Consensus 204 ~~~~~~~~~~-~~~~~v~~l~~g~~~~~l~~~~~~~~~~~~q~~e~~~~~~~~Ia~~f~VPp~~l~----~~~sn~e~~~ 278 (395) T protein:vir:10 204 FTNKLFNTFN-KNQLAIAPLIEGFDYEELSNGGKNSNMPFSELSELMRDAIKNVALMIGIPPGLIY----GETADLEKNT 278 (395) T ss_pred HHHHHhcccc-ccCcceEEcCCCceeeeccccccccchhHHHHHHHHHHHHHHHHHHhCCCHHHhc----CcccCHHHHH Confidence 9999988753 344 55689999999999988765 8999999999999999999999996 4789999999 Q ss_pred HHHHHHHHhHHHHHHHHHHHHhhccchhhcchhhhhhhhhhHhhhhHHHHHHHHHHHHhCCCCCHHHHHHHhCCCCCCCc Q lcl|Aclame:pro 313 QQFYTDTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEAGG 392 (429) Q Consensus 313 ~~~~~~~l~P~~~~i~~~l~~~ll~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~Gl~~~~~g 392 (429) ++|++++|.|++.+||++|+++|+++.++..+ ++||++.+++.|.+++++++.+++++|++|+||+|+++|+||+|+| T Consensus 279 ~~~~~~~l~P~~~~ie~~l~~kL~~~~~~~~~--~~f~~~~l~~~D~~~~~~~~~~~~~~G~lt~NE~R~~~g~~p~~~g 356 (395) T protein:vir:10 279 LVFEKFCLTPLLKKIQNELNAKLITQSMYLKD--TRIEIVGVNKKDPLQYAEAIDKLVSSGSFTRNEVRIMLGEEPSDNP 356 (395) T ss_pred HHHHHHHHHHHHHHHHHHHHHhhcChhhhccc--ceecchhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCC Confidence 99999999999999999999999988775554 5788899999999999999999999999999999999999999765 Q ss_pred --ceeeeccccccccccccccCCCCCCCCCCCCCCCCCC Q lcl|Aclame:pro 393 --DRLLVNGNMLPIDMAGQAYLKGGDTNGEVSKEGNEGN 429 (429) Q Consensus 393 --D~~~~~~n~~~~~~~~~~~~~~g~~~~~~~~~~~~~n 429 (429) |++++|+|++|++...+...++.+.+.+...+.+.|| T Consensus 357 ~~d~~~~~~n~~~~~~~~~~~~~~~~~~~kgg~~~~~g~ 395 (395) T protein:vir:10 357 ELDEYLITKNYEKANSGENDEKEKDENTLKGGDEDESGD 395 (395) T ss_pred CCceeeeccccccccccccccCcccccccCCCCCCCCCC Confidence 9999999999998776655444444433333333444 No 58 >protein:vir:101289 Length: 395 # NCBI annotation: phage portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:1591 # MgeName: phiNM3 # Cross-refs: genbank:acc:YP_908829;genbank:gi:118725093;genbank:GeneID:4555860 Probab=100.00 E-value=1.1e-80 Score=458.92 Aligned_cols=385 Identities=15% Similarity=0.153 Sum_probs=311.0 Q ss_pred CchhhhhhcccccccccccccCCchHHHHHhhcCCCCcceechhhhhccHHHHHHHHHHHHhhccCceEEEecCCceeee Q lcl|Aclame:pro 1 MDSVKKFFNFEKRQTSQVIELNKDDEKLLEWLGISPSTISVKGKNALKVATVFACIKILSESVSKLPLKIYQEDEYGIQR 80 (429) Q Consensus 1 Mg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~~~~ 80 (429) ||||+++|+..+.. .. .. .......++...++++++|++||++||+++|++|+++++++. T Consensus 1 Mg~f~~lf~~~~~~---~~--~~----------~~~~~~~v~~~~~~~~~~v~~~i~~Ia~~iA~~p~~~~~~~~----- 60 (395) T protein:vir:10 1 MSILEKIFKTRKDI---TY--ML----------DLDMIEDLSQQAYVKRLAIDSCIEFVARAVAQSHFKVLEGNR----- 60 (395) T ss_pred CchhhhhhccCccc---cc--cc----------cchhccccchhhhhhhHHHHHHHHHHHHhhccceeEeccCCc----- Confidence 99999998742211 00 00 112334567788999999999999999999999999997543 Q ss_pred eecchhhhhhcccCcCCCCHHHHHHHHHHHHHhhCCeEEEEeeCCCCceEEEEeeCCcceEEEEcCCcceeeeeeEEEee Q lcl|Aclame:pro 81 GTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVYIDDVGLLNSKTKMWYVV 160 (429) Q Consensus 81 ~~~~~~~~~l~~~PN~~~s~~~~~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~l~p~~v~~~~~~~~~~~~~~~~~~~~ 160 (429) ...|+++++|+.+||++||+++||+.++.++++.|++|+++.++. .++++++..+++....+. ....+.. T Consensus 61 ~~~~~~~~ll~~~PN~~~t~~~f~~~~~~~lll~g~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~-----~~~~~~~ 130 (395) T protein:vir:10 61 IQKNDVYYKLNIKPNTDLSSDSFWQQVIYKLIYDNEVLIVVSDSK-----ELLIADSFYREEYALYDD-----IFKDVTV 130 (395) T ss_pred cccchHHHHHHhccCcCCCHHHHHHHHHHHHhhCCceEEEEecCC-----CeEecCCccceeEeecCc-----ceeEEEE Confidence 446899999999999999999999999999999999988775542 356776666655443321 1222333 Q ss_pred cccCceEEEccceEEEeecCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHHccCCcceEEEeCCC-CCHHHHHHHHH Q lcl|Aclame:pro 161 NTGGQQRVLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGD-LNEDAKKVFRE 239 (429) Q Consensus 161 ~~~g~~~~~~~~evih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~-~~~e~~~~~~~ 239 (429) ...+..+.++++||||++++++.+..+|.||+.++...+.... +.|.+++.++|++..+.. .++++.+++++ T Consensus 131 ~~~~~~~~~~~~evih~~~~~~~~~~~G~spi~~~~~~~~~~~-------~~~~~~~~~~gii~~~~~~~~~e~~~~~~~ 203 (395) T protein:vir:10 131 KDYTYQRTFTMQEVIYLKYNNNKVTHFVESLFEDYGKIFGRMI-------GAQLKNYQIRGILKSASSAYDEKNIEKLQA 203 (395) T ss_pred cCceeeeeeccccEEEEccCCCCcccccchHHHHHHHHHHHHH-------HHHHhcCCCceEEEeCCCCCCHHHHHHHHH Confidence 4445567899999999999888888999999999988776544 346788889999988765 58999999999 Q ss_pred HHHHHhcccccccc--eeecCCCceeEecCCChhHH-----HHHHHHHHHHHHHHHHhcCChhhcCCccccccccHHHHH Q lcl|Aclame:pro 240 NFESMSSGLQNSHR--IALMPVGYQFQPISLNMSDA-----QFLENTELTIRQIATAFGIKMHQLNDLSKATLNNIEQQQ 312 (429) Q Consensus 240 ~~~~~~~g~~~~~~--~~vl~~g~~~~~~~~~~~d~-----~~~e~~~~~~~~Ia~~fgvp~~~l~~~~~~~~~n~~~~~ 312 (429) .|++.+++.. +++ ++++++|++|++++++|.++ ||+|.+++++++||++|||||.+|+ ++++|.+++. T Consensus 204 ~~~~~~~~~~-~~~~~v~~l~~g~~~~~l~~~~~~~~~~~~q~~e~~~~~~~~Ia~~f~VPp~~l~----~~~sn~e~~~ 278 (395) T protein:vir:10 204 FTNKLFNTFN-KNQLAIAPLIEGFDYEELSNGGKNSNMPFSELSELMRDAIKNVALMIGIPPGLIY----GETADLEKNT 278 (395) T ss_pred HHHHHhcccc-ccCcceEEcCCCceeeeccccccccchhHHHHHHHHHHHHHHHHHHhCCCHHHhc----CcccCHHHHH Confidence 9999988753 344 55689999999999988765 8999999999999999999999996 4789999999 Q ss_pred HHHHHHHHhHHHHHHHHHHHHhhccchhhcchhhhhhhhhhHhhhhHHHHHHHHHHHHhCCCCCHHHHHHHhCCCCCCCc Q lcl|Aclame:pro 313 QQFYTDTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEAGG 392 (429) Q Consensus 313 ~~~~~~~l~P~~~~i~~~l~~~ll~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~Gl~~~~~g 392 (429) ++|++++|.|++.+||++|+++|+++.++..+ ++||++.+++.|.+++++++.+++++|++|+||+|+++|+||+|+| T Consensus 279 ~~~~~~~l~P~~~~ie~~l~~kL~~~~~~~~~--~~f~~~~l~~~D~~~~~~~~~~~~~~G~lt~NE~R~~~g~~p~~~g 356 (395) T protein:vir:10 279 LVFEKFCLTPLLKKIQNELNAKLITQSMYLKD--TRIEIVGVNKKDPLQYAEAIDKLVSSGSFTRNEVRIMLGEEPSDNP 356 (395) T ss_pred HHHHHHHHHHHHHHHHHHHHHhhcChhhhccc--ceecchhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCC Confidence 99999999999999999999999988775554 5788899999999999999999999999999999999999999765 Q ss_pred --ceeeeccccccccccccccCCCCCCCCCCCCCCCCCC Q lcl|Aclame:pro 393 --DRLLVNGNMLPIDMAGQAYLKGGDTNGEVSKEGNEGN 429 (429) Q Consensus 393 --D~~~~~~n~~~~~~~~~~~~~~g~~~~~~~~~~~~~n 429 (429) |++++|+|++|++...+...++.+.+.+...+.+.|| T Consensus 357 ~~d~~~~~~n~~~~~~~~~~~~~~~~~~~kgg~~~~~g~ 395 (395) T protein:vir:10 357 ELDEYLITKNYEKANSGENDEKEKDENTLKGGDEDESGD 395 (395) T ss_pred CCceeeeccccccccccccccCcccccccCCCCCCCCCC Confidence 9999999999998776655444444433333333444 No 59 >protein:vir:95965 Length: 385 # NCBI annotation: ORF011 # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:1594 # MgeName: 2638A # Cross-refs: genbank:acc:YP_239800;genbank:gi:66395461;genbank:GeneID:5132882 Probab=100.00 E-value=6.3e-81 Score=460.28 Aligned_cols=374 Identities=16% Similarity=0.185 Sum_probs=307.7 Q ss_pred CchhhhhhcccccccccccccCCchHHHHHhhcCCCCcceechhhhhccHHHHHHHHHHHHhhccCceEEEecCCceeee Q lcl|Aclame:pro 1 MDSVKKFFNFEKRQTSQVIELNKDDEKLLEWLGISPSTISVKGKNALKVATVFACIKILSESVSKLPLKIYQEDEYGIQR 80 (429) Q Consensus 1 Mg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~~~~ 80 (429) ||||+++|+..+ +... ..+.. ....++.+.|+++++|++||++||+++|++|++++++++. T Consensus 1 Mg~f~~~f~~~~---~~~~--~~~~~----------~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~p~~~~~~~~~---- 61 (385) T protein:vir:95 1 MGLFDSVFKRHS---ELSW--MYDLE----------FLQDKSKKAYLKQIALNTVVEMVARTISQSEFRVMKNNTK---- 61 (385) T ss_pred CchhhhhhccCc---cccc--ccchh----------hhhccchhhhhhhHHHHHHHHHHHHHHcccceeeeecCcc---- Confidence 999999986322 1111 11111 1123566789999999999999999999999999986543 Q ss_pred eecchhhhhhcccCcCCCCHHHHHHHHHHHHHhhCCeEEEEeeCCCCceEEEEeeCCcceEEEEcCCcceeeeeeEEEee Q lcl|Aclame:pro 81 GTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVYIDDVGLLNSKTKMWYVV 160 (429) Q Consensus 81 ~~~~~~~~~l~~~PN~~~s~~~~~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~l~p~~v~~~~~~~~~~~~~~~~~~~~ 160 (429) ..|+++++|+.+||++||+++||+.++.+++++||||+++.++. +.+..++++.+..+.+.... ...... T Consensus 62 -~~~~l~~lL~~~PN~~~t~~~f~~~~~~~l~l~Gna~i~~~~~~-~~~~~~~~~~~~~~~~~~~~--------~~~~~~ 131 (385) T protein:vir:95 62 -EKGTLYYLLNVRPNRNQNAVDFWQKFIFKLIMDNEVLVVKNDEG-HFFVADDFEKEDELGLYSHR--------FTNVLV 131 (385) T ss_pred -ccchHHHHHhcccCcCCCHHHHHHHHHHHHhhcCceEEEEecCC-Ceeecccccccccccccccc--------ceeeee Confidence 35899999999999999999999999999999999999887654 34555666666555443221 111222 Q ss_pred cccCceEEEccceEEEeecCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHHccCCcceEEEeCC--CCCHHHHHHHH Q lcl|Aclame:pro 161 NTGGQQRVLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVG--DLNEDAKKVFR 238 (429) Q Consensus 161 ~~~g~~~~~~~~evih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~--~~~~e~~~~~~ 238 (429) ...+..+.++++||||++++++.+..+|.||+..+...+....++.. +++.++|+++++. .+++++.++++ T Consensus 132 ~~~~~~~~~~~~eiih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~-------~~~~~~g~l~~~~~~~~~~e~~~~~~ 204 (385) T protein:vir:95 132 NDFEFKRVFTMDDVIYLKYNNQKLDAFSLGLFEDYGEIFGRMIDLQM-------LNNQIRGILKVDATKFYNKEKQKELQ 204 (385) T ss_pred cccceeeeeccccEEEecCCCCCcccccchHHHHHHHHHHHHHHHHH-------hcCCCceEEEeCCccCCCHHHHHHHH Confidence 33345578999999999988888888999999999998876655432 2345778888754 57899999999 Q ss_pred HHHHHHhccccc-ccceeecCCCceeEecCC------ChhHHHHHHHHHHHHHHHHHHhcCChhhcCCccccccccHHHH Q lcl|Aclame:pro 239 ENFESMSSGLQN-SHRIALMPVGYQFQPISL------NMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKATLNNIEQQ 311 (429) Q Consensus 239 ~~~~~~~~g~~~-~~~~~vl~~g~~~~~~~~------~~~d~~~~e~~~~~~~~Ia~~fgvp~~~l~~~~~~~~~n~~~~ 311 (429) +.|++.++|..+ .++++++++|++|+++++ ++.|+||+|.+++++++||++|||||.+|+ ++++|.+++ T Consensus 205 ~~~~~~~~g~~~~~~~i~~l~~g~~~~~l~~~~~~~~s~~d~~~~e~~~~~~~~Ia~~fgVpp~~l~----~~~sn~e~~ 280 (385) T protein:vir:95 205 AYIDTLFDAFQNNTIAVVPLTEGLAYEEHSNRGAAQSAQQFSELNELKKTVLTDVARMIGVPPSLVL----GEMADLEKT 280 (385) T ss_pred HHHHHHhhhhhhcCCceEEcCCCceeEeecccccccCCHHHHHHHHHHHHHHHHHHHHhCCCHHHhc----CCCcCHHHH Confidence 999999998654 455889999999999874 678999999999999999999999999995 478999999 Q ss_pred HHHHHHHHHhHHHHHHHHHHHHhhccchhhcchhhhhhhhhhHhhhhHHHHHHHHHHHHhCCCCCHHHHHHHhCCCCC-- Q lcl|Aclame:pro 312 QQQFYTDTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPE-- 389 (429) Q Consensus 312 ~~~~~~~~l~P~~~~i~~~l~~~ll~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~Gl~~~-- 389 (429) ..+|++.||.|++++||++|+++|+++.+.. +.+++||++.+++.|.+++++++.+++++|++|+||+|+++|+||+ T Consensus 281 ~~~~~~~~l~P~~~~ie~~l~~~L~~~~~~~-~~~~~fd~~~l~~~D~~~~~~~~~~~~~~g~lt~NE~R~~~g~~p~~~ 359 (385) T protein:vir:95 281 IESYLQFCINPLLRKIEAELNSKFFYQDEYL-NDDMHIKVVGIDKRDPLKLSEAIDKLVASGTFTRNQVRIMTGEEPADD 359 (385) T ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCChhhcc-cceEEEechhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCC Confidence 9999999999999999999999999987764 4589999999999999999999999999999999999999999998 Q ss_pred CCcceeeeccccccccccccccCCCCCCCCC Q lcl|Aclame:pro 390 AGGDRLLVNGNMLPIDMAGQAYLKGGDTNGE 420 (429) Q Consensus 390 ~~gD~~~~~~n~~~~~~~~~~~~~~g~~~~~ 420 (429) ||||++++|+|++|++. ++||+++++ T Consensus 360 ~~gd~~~~~~n~~~~~~-----~kgge~~~e 385 (385) T protein:vir:95 360 PELDKFIITKNLQSADA-----FKGGESNEE 385 (385) T ss_pred CCCceeeecccceeccc-----ccCCCCCCC Confidence 68999999999999874 577777777 No 60 >protein:vir:4854 Length: 386 # NCBI annotation: putative portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:106 # MgeName: DT1 # Cross-refs: genbank:acc:NP_049394;genbank:gi:9632422;genbank:GeneID:1258515 Probab=100.00 E-value=7.3e-80 Score=454.45 Aligned_cols=382 Identities=18% Similarity=0.181 Sum_probs=316.5 Q ss_pred Cchhhhhhcccccccccccc-cCCchHHHHHhhcCCCCcceechhhhhccHHHHHHHHHHHHhhccCceEEEecCCceee Q lcl|Aclame:pro 1 MDSVKKFFNFEKRQTSQVIE-LNKDDEKLLEWLGISPSTISVKGKNALKVATVFACIKILSESVSKLPLKIYQEDEYGIQ 79 (429) Q Consensus 1 Mg~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~~~ 79 (429) ||||++++............ ..... ..+++....+..++.+.++++|+|++||++||+.||++|+++++.. T Consensus 1 M~~f~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~v~~~~~~~~~~v~~~i~~ia~~ia~~p~~~~~~~----- 72 (386) T protein:vir:48 1 MPIFNITNLATESPPISQGGFFDITD---PDFLSTLNGSEWVSAESALRNSDLFSIINQLSNDLATVKLTASRKQ----- 72 (386) T ss_pred Cccccccccccccccccccccccccc---chhcccccCCceechhhhhcchHHHHHHHHHHHhhccCceeeccch----- Confidence 99998765422211111111 11111 1334555677788999999999999999999999999999998532 Q ss_pred eeecchhhhhhcccCcCCCCHHHHHHHHHHHHHhhCCeEEEEeeCCCCceEEEEeeCCcceEEEEcCCcceeeeeeEEEe Q lcl|Aclame:pro 80 RGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVYIDDVGLLNSKTKMWYV 159 (429) Q Consensus 80 ~~~~~~~~~~l~~~PN~~~s~~~~~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~l~p~~v~~~~~~~~~~~~~~~~~~~ 159 (429) .+.|+.+||++||+++||+.++.+++++||+|++++++..|++.+|+|++|++|++..+.++.. ..|.. T Consensus 73 -------~~~l~~~pN~~~t~~~f~~~~~~~lll~Gna~~~i~r~~~g~~~~L~~l~~~~v~v~~~~~~~~----~~y~~ 141 (386) T protein:vir:48 73 -------LQGIIDNPSNNANRFNFYQSIFAQMLLGGEAFAYRWRNENGRDMKWEYLRPSQVSFNRLDNKDG----IYYNI 141 (386) T ss_pred -------hHHHhhcCCCCCCHHHHHHHHHHHhhhcCcEEEEEEECCCCcEEEEEEecCceeEEEEcCCCce----EEEEE Confidence 3456679999999999999999999999999999999999999999999999999988765321 11222 Q ss_pred ec---ccCceEEEccceEEEeecCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHHccCCcceEEEeCCCCCHHHHHH Q lcl|Aclame:pro 160 VN---TGGQQRVLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGDLNEDAKKV 236 (429) Q Consensus 160 ~~---~~g~~~~~~~~evih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~~e~~~~ 236 (429) .. ..+..+.|+++||||++++++.+.++|+||+..+...+.++.++++++.++|+||++|+|+++.+..+++++.++ T Consensus 142 ~~~~~~~~~~~~~~~~evih~~~~~~~~~~~G~s~i~~~~~~i~~~~~~~~~~~~~~~ng~~~~~ii~~~~~~~~e~~~~ 221 (386) T protein:vir:48 142 TFDDPRIPPKQHVPQGDVLHFKLLSVDGGLTSVSPLMALSRELNIQKASDKLTLNSLKNALNANGILKIKGGGLLDFKTK 221 (386) T ss_pred EecCccccceeEecCccEEEecCCCCCCceeeccHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEeCCCCCHHHHHH Confidence 11 224567899999999998888888999999999999999999999999999999999999999999999999999 Q ss_pred HHHHHHHHhcccccccceeecCCCceeEecCCChhHHHHHHHHHHHHHHHHHHhcCChhhcCCccccccccHHHHHHHHH Q lcl|Aclame:pro 237 FRENFESMSSGLQNSHRIALMPVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKATLNNIEQQQQQFY 316 (429) Q Consensus 237 ~~~~~~~~~~g~~~~~~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~fgvp~~~l~~~~~~~~~n~~~~~~~~~ 316 (429) +++.|.+.. .++|+++|+++|++|++++++++|+|++|.+++++++||++|||||.+||. .+++++.+++.++|+ T Consensus 222 ~~~~~~~~~---~n~g~~~vl~~g~~~~~l~~~~~d~q~~e~~~~~~~~Ia~~fgVPp~~lg~--~~~~~~~e~~~~~~~ 296 (386) T protein:vir:48 222 LSRSRQAMK---QMQGGPLVLDDLEEFTPLEIKSNVSQLLKQADWTTGQFAKVYGIPENVVGG--QGDQQSSLEMSLDLY 296 (386) T ss_pred HHHHHHHhh---cCCCCceecCCCceEEEcCCChhHHHHHHHHHHHHHHHHHHhCCCHHHhCC--CCCcccHHHHHHHHH Confidence 999887643 578999999999999999999999999999999999999999999999985 457889999999999 Q ss_pred HHHHhHHHHHHHHHHHHhhccchhhcchhhhhhhhhhHhhhhHHHHHHHHHHHHhCCCCCHHHHHHHhCCCCCCCcceee Q lcl|Aclame:pro 317 TDTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEAGGDRLL 396 (429) Q Consensus 317 ~~~l~P~~~~i~~~l~~~ll~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~Gl~~~~~gD~~~ 396 (429) +.+|.|+++.|+++|+++|+.. +++|....++.|...++..+.+++.+|++|+||+|+++|++|++++|... T Consensus 297 ~~~l~P~~~~ie~~l~~~l~~~--------~~~~~~~~~~~d~~~~~~~~~~l~~~g~~t~nE~r~~lg~~~~~~~~~~~ 368 (386) T protein:vir:48 297 NKAVSRYLRPFLSELSQKLSCD--------VDADILPAVDPTGSNSVSRINSMVKSGTLAQNQGLYILQQAEILPKELPE 368 (386) T ss_pred HHHHHHHHHHHHHHHHHhhcch--------hhcchhhhhccChHHHHHHHHHHHhCCCcCHHHHHHHhhcCCCCCccchh Confidence 9999999999999999998754 45666667778888888899999999999999999999999998776432 Q ss_pred eccccccccccccccCCCCCCCCCC Q lcl|Aclame:pro 397 VNGNMLPIDMAGQAYLKGGDTNGEV 421 (429) Q Consensus 397 ~~~n~~~~~~~~~~~~~~g~~~~~~ 421 (429) . +.......+||+.++++ T Consensus 369 ~-------~~~~~~~~~gGd~~~~~ 386 (386) T protein:vir:48 369 G-------ENPNKTTLKGGEINGED 386 (386) T ss_pred h-------cCCCCCccCCCCCCCCC Confidence 1 11222345667766655 No 61 >protein:vir:100882 Length: 383 # NCBI annotation: putative portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:1473 # MgeName: Lc-Nu # Cross-refs: genbank:acc:YP_358762;genbank:gi:78000027;genbank:GeneID:3726153 Probab=100.00 E-value=5.4e-80 Score=455.15 Aligned_cols=377 Identities=18% Similarity=0.227 Sum_probs=310.8 Q ss_pred CchhhhhhcccccccccccccCCchHHHHHhhcCCCCcceechhhhhccHHHHHHHHHHHHhhccCceEEEecCCceeee Q lcl|Aclame:pro 1 MDSVKKFFNFEKRQTSQVIELNKDDEKLLEWLGISPSTISVKGKNALKVATVFACIKILSESVSKLPLKIYQEDEYGIQR 80 (429) Q Consensus 1 Mg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~~~~ 80 (429) ||||++.+- .++...... ......+...+........++.+.|+++++|++||++||+++|++|+++++ T Consensus 1 Mg~~~~~~~-~k~~~~~~~--~~~~~~~~~~~~~~~~~~~v~~~~~l~~~~v~~~i~~ia~~ia~~~~~~~~-------- 69 (383) T protein:vir:10 1 MGLLTPKNF-SKRNAKNMV--YPSNPAFFTTTVGGMQLSYVSALSALQNTNVYSVINRIASDVSSAHFKTEN-------- 69 (383) T ss_pred CCccccccc-ccccccccc--cccchhhhhhhccCccccccchhHhhcchHHHHHHHHHHHhhccCceeecc-------- Confidence 999986432 222222111 122223333333334455688899999999999999999999999999864 Q ss_pred eecchhhhhhcccCcCCCCHHHHHHHHHHHHHhhCCeEEEEeeCCCCceEEEEeeCCcceEEEEcCCcceeeeeeEEEee Q lcl|Aclame:pro 81 GTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVYIDDVGLLNSKTKMWYVV 160 (429) Q Consensus 81 ~~~~~~~~~l~~~PN~~~s~~~~~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~l~p~~v~~~~~~~~~~~~~~~~~~~~ 160 (429) |+..++|+ +||++||+++||+.++.+++++||+|++++++ ..+++|+++.+|++..+.+. ..+++.. T Consensus 70 ---~~~~~ll~-~PN~~~t~~~f~~~~~~~l~l~Gn~~~~i~~~----~~~~~p~~~~~v~~~~~~~~-----~~~~~~~ 136 (383) T protein:vir:10 70 ---TATLNRLE-SPSSLIGRFSFWQGALMQLCLSGNDYIPLVGQ----NLEHIPNSDVQINYLPGNMG-----IVYTVLE 136 (383) T ss_pred ---cchhhhhh-CCCCCCCHHHHHHHHHHHhhhcCCeEEEEEcC----ceeEeecCcceEEEEEcCCc-----eEEEEEE Confidence 45567775 89999999999999999999999999999875 46788888888887766542 2334555 Q ss_pred cccCceEEEccceEEEeecCCC--CCcccccCHHHHHHHHHHHHHHHHHHHHHHHHccCCcceEEEeCCCC-CHHHHHHH Q lcl|Aclame:pro 161 NTGGQQRVLKPEEILHFKNGIT--LDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGDL-NEDAKKVF 237 (429) Q Consensus 161 ~~~g~~~~~~~~evih~~~~~~--~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~-~~e~~~~~ 237 (429) ..++..+.|+++||||||+.++ .++.+|+||+.++...+....++++++.++|+||++|+|++++++.. ++++.+++ T Consensus 137 ~~~~~~~~~~~~evih~r~~~~~~~~~~~G~s~l~~~~~~i~~~~~~~~~~~~~f~ng~~~~~il~~~~~~~~~e~~~~~ 216 (383) T protein:vir:10 137 SNDRPKMVLRQDQMLHFRLMPDPQYRYLIGRSPLESLQNALNLDDKASKSNMSAMENQINPAGKLTISNYLSDGKDLESA 216 (383) T ss_pred cCCceEEEEcccceEEeccCCCCcccccccccHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEeCCCCCCHHHHHHH Confidence 6677888999999999997654 34678999999999999999999999999999999999999999877 58899999 Q ss_pred HHHHHHHhcccccccceeecCCCceeEecCCChhHHHHH-HHHHHHHHHHHHHhcCChhhcCCcc--ccccccHHHHHHH Q lcl|Aclame:pro 238 RENFESMSSGLQNSHRIALMPVGYQFQPISLNMSDAQFL-ENTELTIRQIATAFGIKMHQLNDLS--KATLNNIEQQQQQ 314 (429) Q Consensus 238 ~~~~~~~~~g~~~~~~~~vl~~g~~~~~~~~~~~d~~~~-e~~~~~~~~Ia~~fgvp~~~l~~~~--~~~~~n~~~~~~~ 314 (429) ++.|++.++| .|+|+++++++|++|++++.++.|++++ |.+++++++||++|||||.+||..+ ..+++|.+++... T Consensus 217 ~~~~~~~~~~-~n~~~~~vl~~g~~~~~l~~~~~d~~~l~e~~~~~~~~Ia~afgVPp~~lg~~~~~~~~~sn~eq~~~~ 295 (383) T protein:vir:10 217 REEFEKANTG-DNSGRLMVLPDGFDYTQLEMKTDVFKALADNSAYSADQISKAFGVPSDILGGGTSTESQHSNIDQIKAT 295 (383) T ss_pred HHHHHHHhCc-cccCCccccCCCceEEecCCChhHHHHHHHHHHHHHHHHHHHhCCCHHHcCCccCCCCccccHHHHHHH Confidence 9999999887 6899999999999999999999999974 8999999999999999999998643 5688999988765 Q ss_pred HHHHHHhHHHHHHHHHHHHhhccchhhcchhhhhhhhhhHhhhhHHHHHHHHHHHHhCCCCCHHHHHHHhCCCCCCCcce Q lcl|Aclame:pro 315 FYTDTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEAGGDR 394 (429) Q Consensus 315 ~~~~~l~P~~~~i~~~l~~~ll~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~Gl~~~~~gD~ 394 (429) | ..||.|+++.|+++|+++++.. +++||++.+++.|.+++++.+.+++++|++|+||+|+++|++|+|+||. T Consensus 296 ~-~~~l~P~~~~ie~~l~~~l~~~-------~~~f~~~~l~~~d~~~~~~~~~~~~~~G~~t~nE~R~~lg~~p~~~~d~ 367 (383) T protein:vir:10 296 Y-LANLNSYVNPIVDELRLKMNAP-------DLELDIKDMLDVDDSILINQVSNLAKSGVLGAEQAQFILTRSGFLPDNL 367 (383) T ss_pred H-HHHHHHHHHHHHHHHHHhhCCc-------eEEeechhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCcccCCcc Confidence 5 5699999999999999998743 5899999999999999999999999999999999999999999999986 Q ss_pred eeeccccccccccccccCCCCCCC Q lcl|Aclame:pro 395 LLVNGNMLPIDMAGQAYLKGGDTN 418 (429) Q Consensus 395 ~~~~~n~~~~~~~~~~~~~~g~~~ 418 (429) .....+. ...+||++. T Consensus 368 ~~~~~~~--------~~~~gGd~e 383 (383) T protein:vir:10 368 PEFKPLT--------NETKGGDDK 383 (383) T ss_pred cccCCCc--------ccCCCCCCC Confidence 5443332 223444444 No 62 >protein:vir:80644 Length: 551 # NCBI annotation: gp23 # Family: family:all:2446 # MgeID: mge:1883 # MgeName: A511 # Cross-refs: genbank:acc:YP_001468463;genbank:gi:157325038;genbank:GeneID:5601615 Probab=100.00 E-value=5.1e-80 Score=455.28 Aligned_cols=423 Identities=14% Similarity=0.136 Sum_probs=312.9 Q ss_pred Cchhhhhhc-------cccc---ccc-------------------cccccCCc---hHHHHHhhcCCCCcceec-----h Q lcl|Aclame:pro 1 MDSVKKFFN-------FEKR---QTS-------------------QVIELNKD---DEKLLEWLGISPSTISVK-----G 43 (429) Q Consensus 1 Mg~~~~~~~-------~~~~---~~~-------------------~~~~~~~~---~~~~~~~~~~~~~~~~~~-----~ 43 (429) ||||+++.- ++.. ... +....+.. ...+...++..++..+.. . T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~a~~~~~~~~~~~~~~~~~r~~~~~~~~l~~~~ 84 (551) T protein:vir:80 5 LGLFESIRLVGVNKSDAVKHIEVDDNYSIAIQQREQEQISKAMNNKEVAYSQPVIGSMSANPGFKTKPSIRNNQDLHGVL 84 (551) T ss_pred hhhHHHhhhccCChhhcccccccccceeeecccccHHHHHHhhccCcceeecccccceecCcccccCccccChhHHHHHH Confidence 999998761 1110 000 00000000 000111111112221111 1 Q ss_pred hhhhccHHHHHHHHHHHHhhcc-----------CceEEEecCCceeee----eecchhhhhhcccCcCC-----CCHHHH Q lcl|Aclame:pro 44 KNALKVATVFACIKILSESVSK-----------LPLKIYQEDEYGIQR----GTKHYLNNLLRLRPNPY-----MSSMNF 103 (429) Q Consensus 44 ~~a~~~~~v~~~i~~ia~~ia~-----------~~~~~~~~~~~~~~~----~~~~~~~~~l~~~PN~~-----~s~~~~ 103 (429) +.+..+|+|++||+.||+.||+ ++|.+..++.+.+.. ...+.+..+|+ +||++ +|+.+| T Consensus 85 ~~~~~npiv~~~I~~ia~~IA~~~~~~~~~~~g~~~~i~~kd~~~~~~~~~~~~~~~i~~~l~-~pn~~~~p~~~s~~~f 163 (551) T protein:vir:80 85 KKFGGNIILNAIINTRSNQVSMYCKPARHSEKGVGFEVRLKDLDKKPTSHDEATIKRIESFIE-KTGVDNDINRDSFSSF 163 (551) T ss_pred HHhhcCHHHHHHHHHHHHHHhhhhhhhhhhcCCCCceEEecccCcccChhHHHHHHHHHHHHH-hcCCCCCCccchHHHH Confidence 2334579999999999999997 455554443322111 11234455564 78887 488999 Q ss_pred HHHHHHHHHhhCCeEEEEeeCCCCceEEEEeeCCcceEEEEcCCcceeeeeeEEEeecccCceEEEccceEEEeecCCCC Q lcl|Aclame:pro 104 FGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVYIDDVGLLNSKTKMWYVVNTGGQQRVLKPEEILHFKNGITL 183 (429) Q Consensus 104 ~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~l~p~~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~evih~~~~~~~ 183 (429) +++++.+++++||+|++++++..|++.+||||+|++|++..+.++........++.+..++....|+++||||+++++.. T Consensus 164 ~~~lv~dlll~Gnay~~i~rd~~G~~~~L~~l~p~~V~v~~~~~g~~~~~~~~y~~~~~g~~~~~~~~~eiiH~~~n~~~ 243 (551) T protein:vir:80 164 VKKIVRDTYMYDQVNFEKVFNRNQSMVRFVAKDPTTIFFATTADGKIPDNGNRFVQVIDQKIVATFNAREMAFAVRNPRS 243 (551) T ss_pred HHHHHHHHHhcCCEEEEEEECCCCcEEEEEEeCCceeEEEECCccccccCceEEEEEeCCcEEEEEcccceEEecccCCC Confidence 99999999999999999999999999999999999999998887765555555666666667778999999999965433 Q ss_pred ---CcccccCHHHHHHHHHHHHHHHHHHHHHHHHccCCcceEEEeCC--CCCHHHHHHHHHHHHHHhcccccccceeec- Q lcl|Aclame:pro 184 ---DGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVG--DLNEDAKKVFRENFESMSSGLQNSHRIALM- 257 (429) Q Consensus 184 ---~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~--~~~~e~~~~~~~~~~~~~~g~~~~~~~~vl- 257 (429) .+.+|+||+.++...+..+.++++++.++|+||++|+|+|+++. .+++++++++++.|++.++|..|+|+++++ T Consensus 244 ~~~~~~~G~spi~~a~~~i~~~~a~~~~~~~~f~Ng~~p~giL~~~~~~~lt~e~~~~lk~~~~~~~~G~~nag~~~vl~ 323 (551) T protein:vir:80 244 DIYATGYGYPELEIALKQFIAHENTEAFNDRFFSHGGTTRGILQIKAAQQQSQHALEIFKREWKNSLSGINGSWQIPVVS 323 (551) T ss_pred CcccccccccHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEEEEcCCCCCCHHHHHHHHHHHHHHhcCccccCcccccc Confidence 35689999999999999999999999999999999999999864 479999999999999999999999998666 Q ss_pred CCCceeEecCCChhHHHHHHHHHHHHHHHHHHhcCChhhcCCccc----------cccccHHHHHHHHHHHHHhHHHHHH Q lcl|Aclame:pro 258 PVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSK----------ATLNNIEQQQQQFYTDTLQATLTMY 327 (429) Q Consensus 258 ~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~fgvp~~~l~~~~~----------~~~~n~~~~~~~~~~~~l~P~~~~i 327 (429) ++|++|+++++++.|++|+|.+++++++||++|||||.+||..++ .+++|++++...|++.||.|++..| T Consensus 324 ~~g~~~~~l~~~~~D~qfle~~~~~~~~Ia~aFgVPp~~lG~~~~~~~~~~~~~s~t~sn~e~~~~~f~~~tL~P~~~~i 403 (551) T protein:vir:80 324 AEDVKFVNMTPSARDMEFEKWLNYLINVISALYGIDPAEINIPNNGGATGSKGGSLNEGNSAEKNQASKNKGLQPLLGFI 403 (551) T ss_pred CCCceEEEccCChhHHHHHHHHHHHHHHHHHHhcCCHHHcCcccccccccccccccchhhHHHHHHHHHHHHHHHHHHHH Confidence 689999999999999999999999999999999999999986543 3789999999999999999999999 Q ss_pred HHHHHHhhccchhhcchhhhhhhhhhHhhhhHHHHHHHHHHHHhCCCCCHHHHHHHhCCCC-CCCcceeeeccccccccc Q lcl|Aclame:pro 328 EQEMTYKLFLDSELDKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPP-EAGGDRLLVNGNMLPIDM 406 (429) Q Consensus 328 ~~~l~~~ll~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~Gl~~-~~~gD~~~~~~n~~~~~~ 406 (429) |++|+++|++..+ ..++++ ++.+...+..++++.++ ++.+|+||+||+|+++|||| +||||+++.|.++.+++. T Consensus 404 e~~ln~~L~~~~~--~~~~f~--f~~~~~~~~~~~~~~~~-~~~~g~lT~NE~R~~~gl~P~~egGD~~~~~~~~~~~~~ 478 (551) T protein:vir:80 404 EDFINKHIVAEFG--DKYTFQ--FVGGDIKSELESVKILA-EKAKVAMTVNEVRKELNLPGDVIGGDIPLNGVIVQRIGQ 478 (551) T ss_pred HHHHHhhhccccC--CceEEE--eeccChhhHHHHHHHHH-HHhcCCcCHHHHHHHhCCCCCCCCCceeecccccccccc Confidence 9999999986543 344444 45666777777777654 66789999999999999998 799999999988766543 Q ss_pred cccccC----------------CCCCCCCCCCCCC--------CCCC Q lcl|Aclame:pro 407 AGQAYL----------------KGGDTNGEVSKEG--------NEGN 429 (429) Q Consensus 407 ~~~~~~----------------~~g~~~~~~~~~~--------~~~n 429 (429) ..+... .+++.+.+++.+. .+.| T Consensus 479 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 525 (551) T protein:vir:80 479 LMQQEQFEHEKQQSNLQMLQEQTGNRVSTDVEDIPDGKDTTGDIGKD 525 (551) T ss_pred cccccCcchhhhhhccccccCcCCCCCCCCCCCCCCccccCCCcccc Confidence 221110 0000111111100 0000 No 63 >protein:vir:4089 Length: 395 # NCBI annotation: hypothetical protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:86 # MgeName: 2389 # Cross-refs: genbank:acc:NP_510984;swissprot:trembl:q8w606;genbank:gi:17488506;uniprot:Q8W606;genbank:GeneID:1260314 Probab=100.00 E-value=2.3e-80 Score=457.18 Aligned_cols=389 Identities=11% Similarity=0.080 Sum_probs=303.2 Q ss_pred CchhhhhhcccccccccccccCCchHHHHHhhcCCCCcceechhhhhccHHHHHHHHHHHHhhccCceEEEecCCceeee Q lcl|Aclame:pro 1 MDSVKKFFNFEKRQTSQVIELNKDDEKLLEWLGISPSTISVKGKNALKVATVFACIKILSESVSKLPLKIYQEDEYGIQR 80 (429) Q Consensus 1 Mg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~~~~ 80 (429) |||++++++++.+....... . .+..| .+...++.+.++++++|++||++||+++|++||+++++++ T Consensus 1 Mg~~~~~~~~~~~~~~~~~~-~----~~~~~----~~~~~~~~~~~l~~~~v~~~v~~Ia~~ia~~p~~~~~~~~----- 66 (395) T protein:vir:40 1 MGFKSWVSGFFNEEQRTLNL-T----DTVWC----SIPSEKLKELSIKKWAIDSCANKIANTLSCAEVLTYEKGE----- 66 (395) T ss_pred CchHHHHHhhhccccccccc-c----cchhh----ccccccchhhhhhhHHHHHHHHHHHHHHhhCceeeccCCc----- Confidence 99999999988754322111 1 11111 1233456678999999999999999999999999998543 Q ss_pred eecchhhhhhcccCcCCCCHHHHHHHHHHHHHhhCCeEEEEeeCCCCceEEEEeeCCcceEEEEcCCcceeeeeeEEEee Q lcl|Aclame:pro 81 GTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVYIDDVGLLNSKTKMWYVV 160 (429) Q Consensus 81 ~~~~~~~~~l~~~PN~~~s~~~~~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~l~p~~v~~~~~~~~~~~~~~~~~~~~ 160 (429) ...|+++++|+.+||++||+++||+.++.+|+++||||+++.++. +++.++..+. ...... ........ T Consensus 67 ~~~~~~~~lL~~~PN~~~t~~~f~~~~~~~lll~Gnay~~~~~~~------~~~~~~~~~~--~~~~~~---~~~~~v~~ 135 (395) T protein:vir:40 67 EVRKKNWYMFNVEANQNQNATEFWKKAIYKLVYDNEALIFMQDEY------IYVADSFTKN--DKSLYE---NTYTEVTL 135 (395) T ss_pred cccchHHHHHHhcCCCCCCHHHHHHHHHHHHhhcCceEEEEecCc------eeecCCcccc--cccccc---ceeeeeee Confidence 345899999999999999999999999999999999999997754 2332222111 111000 01111111 Q ss_pred cccCceEEEccceEEEeecCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHHccCCcceEEEeCCCCCHHHHHHHHHH Q lcl|Aclame:pro 161 NTGGQQRVLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGDLNEDAKKVFREN 240 (429) Q Consensus 161 ~~~g~~~~~~~~evih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~~e~~~~~~~~ 240 (429) ..-+..+.|++++|||||+++......+.+++..+...+.... ....+.++.++.++++.+...++++.+++++. T Consensus 136 ~~~~~~~~~~~~evih~r~~~~~~~~~~~~l~~~~~~~~~~~~-----~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 210 (395) T protein:vir:40 136 KDLTLKKEFKESEVLHLTLNNESIKSIIDGFYLLYGDLLTAAV-----NKYKKLNSRKIIVKLKAMFGQTPEAEEKLRLM 210 (395) T ss_pred cCceeeeeeccccEEEeecCCCCccccchhHHHHHHHHHHHHH-----HHHHhcCCCCceEEEecccCCCHHHHHHHHHH Confidence 2222346799999999997655444455555555544433322 22334556666666667888999999999999 Q ss_pred HHHHhccc-ccccceeecCCCceeEecCCChhHHHHHHHHHHH---HHHHHHHhcCChhhcCCccccccccHHHHHHHHH Q lcl|Aclame:pro 241 FESMSSGL-QNSHRIALMPVGYQFQPISLNMSDAQFLENTELT---IRQIATAFGIKMHQLNDLSKATLNNIEQQQQQFY 316 (429) Q Consensus 241 ~~~~~~g~-~~~~~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~---~~~Ia~~fgvp~~~l~~~~~~~~~n~~~~~~~~~ 316 (429) |++.+++. .++++++++++|++|+++++++.|+|++|.+++. +++||++|||||.+|+ ++++|.+++.+.|+ T Consensus 211 ~~~~~~~~~~~~~~~~vl~~g~~~~~l~~~~~d~q~~e~~~~~~~~~~~Ia~~fgVPp~~l~----~~~sn~e~~~~~f~ 286 (395) T protein:vir:40 211 LSERMKKFLAEGDSALPVEDGMEIDELAGDSKIAESRDIKKMIDDVFEMVANSFNIPLGLAK----GDTVGLSEQVNSFL 286 (395) T ss_pred HHHHHHHhhccCCceeecCCCceEEeccCChhhhhHHHHHHHHHHHHHHHHHHhCCCHHHhc----CCCcCHHHHHHHHH Confidence 99998774 5778899999999999999999999999999887 4799999999999996 46899999999999 Q ss_pred HHHHhHHHHHHHHHHHHhhccchhhcchhhhhhhhhhHhhhhHHHHHHHHHHHHhCCCCCHHHHHHHhCCCCCC--Ccce Q lcl|Aclame:pro 317 TDTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEA--GGDR 394 (429) Q Consensus 317 ~~~l~P~~~~i~~~l~~~ll~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~Gl~~~~--~gD~ 394 (429) +++|.|++++||++|+++||+..++..+++++||++.+++.|.+++++.+.+++++|++|+||+|+++|+||++ +||+ T Consensus 287 ~~~L~P~~~~ie~~l~~kLl~~~~~~~g~~i~fd~~~ll~~d~~~~~~~~~~~~~~G~~t~NE~R~~~g~~pi~~~~gD~ 366 (395) T protein:vir:40 287 MFSINPIAEMFTDEGNRKFYGRDSVLERTYMKLDTTRIKVQDIQEIASSMDVLFHIGVNTIDDNLRMIGREPVMSPETQE 366 (395) T ss_pred HHHHHHHHHHHHHHHHHhcCChhhhcCCceEEEechhhhccCHHHHHHHHHHHHhCCCCCHHHHHHHhCCCCCCCCCCce Confidence 99999999999999999999999998999999999999999999999999999999999999999999999995 5999 Q ss_pred eeeccccccccccccccCCCCCCCCCCCCC Q lcl|Aclame:pro 395 LLVNGNMLPIDMAGQAYLKGGDTNGEVSKE 424 (429) Q Consensus 395 ~~~~~n~~~~~~~~~~~~~~g~~~~~~~~~ 424 (429) +++|+|++|++...+ ..+||+++++..++ T Consensus 367 ~~~~~n~~~~~~~~~-~~kgge~~~~~~~~ 395 (395) T protein:vir:40 367 RFVTKNYAPLGENEE-DLKGGDINENKGDS 395 (395) T ss_pred eeecccccccccccc-ccCCCCCCCCcCCC Confidence 999999999987654 44666666554333 No 64 >protein:vir:63755 Length: 547 # NCBI annotation: gp14 # Family: family:all:2446 # MgeID: mge:1517 # MgeName: P100 # Cross-refs: genbank:gi:82547619;genbank:GeneID:3783506 Probab=100.00 E-value=5.5e-79 Score=449.61 Aligned_cols=423 Identities=15% Similarity=0.153 Sum_probs=311.6 Q ss_pred Cchhhhhhccccccccc----------ccccC-C----------------chHHHH-----HhhcCCCCccee-----ch Q lcl|Aclame:pro 1 MDSVKKFFNFEKRQTSQ----------VIELN-K----------------DDEKLL-----EWLGISPSTISV-----KG 43 (429) Q Consensus 1 Mg~~~~~~~~~~~~~~~----------~~~~~-~----------------~~~~~~-----~~~~~~~~~~~~-----~~ 43 (429) ||||+++..-++-+... ..... . ..+.+. ..++..++..+. .. T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~l~~l~ 80 (547) T protein:vir:63 1 MGLFESIRLAGVNKSDAVKHIEVDDNYSIAIQQREQEQISKAMNNKEVAYSQPVIGSMSANPGFKTKPSIRNNQDLHGVL 80 (547) T ss_pred CchhhhhhhhcCCccccccccccccccchhhhhhhHHHHHHhhcccchhhhchhhheeecccccccCCccCChhHHHHHH Confidence 99999886533211000 00000 0 000000 001111111111 01 Q ss_pred hhhhccHHHHHHHHHHHHhhccC-----------ceEEEecCCcee----eeeecchhhhhhcccCcCCC-----CHHHH Q lcl|Aclame:pro 44 KNALKVATVFACIKILSESVSKL-----------PLKIYQEDEYGI----QRGTKHYLNNLLRLRPNPYM-----SSMNF 103 (429) Q Consensus 44 ~~a~~~~~v~~~i~~ia~~ia~~-----------~~~~~~~~~~~~----~~~~~~~~~~~l~~~PN~~~-----s~~~~ 103 (429) +.+..+|+|++||+.||+.||++ .|.+.-++.+.+ .....+.+..+|+ +||+++ |+.+| T Consensus 81 ~~~~~npiv~~~I~~~a~~ia~~~~~~~~~~~~~~~~ir~k~~~~~~~~~~~~~~~~l~~~l~-~pn~~~~p~~~s~~~f 159 (547) T protein:vir:63 81 KKFGGNIILNAIINTRSNQVSMYCKPARHSEKGVGFEVRLKDLDKKPTSHDEATIKRIESFIE-KTGVDNDINRDSFSSF 159 (547) T ss_pred HHhhcCHHHHHHHHHHHHHHhhhhhhhhhhccCCCceeEecccccccChhhHHHHHHHHHHHH-hhCCCCCCccchHHHH Confidence 23346899999999999999963 233332222111 1112245556664 788774 88999 Q ss_pred HHHHHHHHHhhCCeEEEEeeCCCCceEEEEeeCCcceEEEEcCCcceeeeeeEEEeecccCceEEEccceEEEeecCCCC Q lcl|Aclame:pro 104 FGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVYIDDVGLLNSKTKMWYVVNTGGQQRVLKPEEILHFKNGITL 183 (429) Q Consensus 104 ~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~l~p~~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~evih~~~~~~~ 183 (429) ++.++.+++++||+|++++++..|++.+||||+|++|++..+.++........++.+..++..+.|+++||||+++++.. T Consensus 160 ~~~lv~d~ll~Gn~~~~i~rd~~G~~~~L~~l~p~~V~~~~~~~g~~~~~~~~y~~~~~~~~~~~~~~~eiih~r~n~~~ 239 (547) T protein:vir:63 160 VKKIVRDTYMYDQVNFEKVFNRNQSMVRFVAKDPTTIFFATTADGKIPDNGNRFVQVIDQKIVATFNAREMAFAVRNPRS 239 (547) T ss_pred HHHHHHHHHhhCCEEEEEEECCCCcEEEEEEecCceeEEEECCccccccCceEEEEEcCCcEEEEeccccEEEecccCCC Confidence 99999999999999999999999999999999999999998887766555555666666777788999999999965543 Q ss_pred C---cccccCHHHHHHHHHHHHHHHHHHHHHHHHccCCcceEEEeCC--CCCHHHHHHHHHHHHHHhcccccccceeec- Q lcl|Aclame:pro 184 D---GLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVG--DLNEDAKKVFRENFESMSSGLQNSHRIALM- 257 (429) Q Consensus 184 ~---~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~--~~~~e~~~~~~~~~~~~~~g~~~~~~~~vl- 257 (429) + ..+|+||+.++...+..+.++++++.++|+||++|+|+|+++. .+++++.+++++.|++.++|..|+|+++++ T Consensus 240 ~~~~~~~G~Spi~~~~~~i~~~~~a~~~~~~~f~Ng~~p~giL~~~~~~~ls~e~~~~lk~~~~~~~~G~~nagk~~vl~ 319 (547) T protein:vir:63 240 DIYATGYGYPELEIALKQFIAHENTEAFNDRFFSHGGTTRGILQIKAAQQQSQHALEIFKREWKNSLSGINGSWQIPVVS 319 (547) T ss_pred CcccccccccHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEEEecCCCCCCHHHHHHHHHHHHHHhcCccccccccccc Confidence 3 5679999999999999999999999999999999999998864 379999999999999999999999998665 Q ss_pred CCCceeEecCCChhHHHHHHHHHHHHHHHHHHhcCChhhcCCccc----------cccccHHHHHHHHHHHHHhHHHHHH Q lcl|Aclame:pro 258 PVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSK----------ATLNNIEQQQQQFYTDTLQATLTMY 327 (429) Q Consensus 258 ~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~fgvp~~~l~~~~~----------~~~~n~~~~~~~~~~~~l~P~~~~i 327 (429) ++|++|+++++++.|++|+|++++++++||++|||||.+||..+. .+++|.+++...|++.||.|+++.| T Consensus 320 ~~g~~~~~l~~~~~d~qfle~~~~~~~~Ia~afgVPP~~lG~~~~~~~~~~~~~s~t~sn~e~~~~~~~~~tL~P~~~~i 399 (547) T protein:vir:63 320 AEDVKFVNMTPSARDMEFEKWLNYLINVISALYGIDPAEINIPNNGGATGSKGGSLNEGNSAEKNQASKNKGLQPLLGFI 399 (547) T ss_pred CCCceEEEcCCChhHHHHHHHHHHHHHHHHHHhCCCHHHcCcccccccccccccccchhhHHHHHHHHHHHHHHHHHHHH Confidence 689999999999999999999999999999999999999986443 3789999999999999999999999 Q ss_pred HHHHHHhhccchhhcchhhhhhhhhhHhhhhHHHHHHHHHHHHhCCCCCHHHHHHHhCCCC-CCCcceeeeccccccccc Q lcl|Aclame:pro 328 EQEMTYKLFLDSELDKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPP-EAGGDRLLVNGNMLPIDM 406 (429) Q Consensus 328 ~~~l~~~ll~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~Gl~~-~~~gD~~~~~~n~~~~~~ 406 (429) +++||++|++..+ ..++++| +.+...+..++++.+ +++.+|+||+||+|+++|||| +||||+++.|.+..+++. T Consensus 400 e~~ln~~L~~~~~--~~~~~~f--~~~~~~~~~~~~~~~-~~~~~g~lT~NE~R~~~gl~P~~egGD~~~~~~~~~~~~~ 474 (547) T protein:vir:63 400 EDFINKHIVAEFG--DKYTFQF--VGGDIKSELESVKIL-AEKAKVAMTVNEVRKELNLPGDVIGGDIPLNGVIVQRIGQ 474 (547) T ss_pred HHHHHhhcccccC--CceEEEe--eccccccHHHHHHHH-HHHhCCCcCHHHHHHHhCCCCCCCCCceeecccccccccc Confidence 9999999886542 3455555 555666777777655 466789999999999999998 799999998887766543 Q ss_pred cccccC----------------CCCCCCCCCCCCCCCCC Q lcl|Aclame:pro 407 AGQAYL----------------KGGDTNGEVSKEGNEGN 429 (429) Q Consensus 407 ~~~~~~----------------~~g~~~~~~~~~~~~~n 429 (429) ..+... .+++.+.+++.+.++.+ T Consensus 475 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 513 (547) T protein:vir:63 475 LMQQEQFEHEKQQSNLQMLQEQTGNRVSTDVEDIPDGKD 513 (547) T ss_pred cccccCCccccchhhccccccccCCCCCCCCCCCCCCcc Confidence 221100 01111111111111000 No 65 >protein:vir:7407 Length: 392 # NCBI annotation: putative portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:146 # MgeName: P335 # Cross-refs: genbank:acc:NP_839924;genbank:gi:30089894;genbank:GeneID:1260681 Probab=100.00 E-value=1.2e-78 Score=447.86 Aligned_cols=384 Identities=16% Similarity=0.132 Sum_probs=304.4 Q ss_pred Cchhhhhhcccccccccccc---cCCchHHHHHhhcCCCCcceechhhhhccHHHHHHHHHHHHhhccCceEEEecCCce Q lcl|Aclame:pro 1 MDSVKKFFNFEKRQTSQVIE---LNKDDEKLLEWLGISPSTISVKGKNALKVATVFACIKILSESVSKLPLKIYQEDEYG 77 (429) Q Consensus 1 Mg~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~ 77 (429) ||||+.|++......+.... .......+..+++ ..++..++.+.|+++++|++||++||++||++|+++++... T Consensus 3 m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~v~~~~al~~~~v~~~v~~ia~~ia~lp~~~~~~~~-- 79 (392) T protein:vir:74 3 LPILNFINQTNDPPEAGSVQSYFPDGNDAQIMESLL-GDNNEWVSARAALRNSDLFSIILQLSSDLAIVKINAEKKKN-- 79 (392) T ss_pred chhhhhhhcccCcccccccccccccCchhhhhhhcc-CCCCcccchhhhhcchHHHHHHHHHHHhhccCceeeccchh-- Confidence 99998665433222222111 1223334444443 34566789999999999999999999999999999987543 Q ss_pred eeeeecchhhhhhcccCcCCCCHHHHHHHHHHHHHhhCCeEEEEeeCCCCceEEEEeeCCcceEEEEcCCcceeeeeeEE Q lcl|Aclame:pro 78 IQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVYIDDVGLLNSKTKMW 157 (429) Q Consensus 78 ~~~~~~~~~~~~l~~~PN~~~s~~~~~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~l~p~~v~~~~~~~~~~~~~~~~~ 157 (429) ..|+.+||++||+++||+.++.+++++||+|++++++..|++.+|||++|++|++..+.+..... .... T Consensus 80 ----------~~l~~~PN~~~t~~~f~~~~~~~lll~Gna~~~i~r~~~G~~~~L~~i~~~~v~v~~~~~~~~~~-y~~~ 148 (392) T protein:vir:74 80 ----------QGIIDNPSTNANKHGFWQSMFAQLLLGGEAFAYRWRNANGADMKWEYLRPSQVNTYYFEYENGMY-YNIT 148 (392) T ss_pred ----------hhhhhhcCCCCCHHHHHHHHHHHhhhcCCEEEEEEECCCCcEEEEEEEcCceeEEEEcCCCceEE-EEEE Confidence 23567999999999999999999999999999999999999999999999999998876432111 0111 Q ss_pred EeecccCceEEEccceEEEeecCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHHccCCcceEEEeCCCCCHHHHHHH Q lcl|Aclame:pro 158 YVVNTGGQQRVLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGDLNEDAKKVF 237 (429) Q Consensus 158 ~~~~~~g~~~~~~~~evih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~~e~~~~~ 237 (429) +.....+..+.++++|||||+.+++.+..+|+||+.++...+.+..+++++..++|+||++|+|++++++...+++ +. T Consensus 149 ~~~~~~~~~~~~~~~evih~~~~~~~~~~~G~s~i~~~~~~i~~~~~~~~~~~~~f~ng~~p~~il~~~~~~~~~~--~~ 226 (392) T protein:vir:74 149 FDDPKIEPILQAPQSDLIHMKLLSIDGGKTGISPLYSLRRESKIQRASDRLTISSLNSSLNVPGVLTVKGGGLLSD--KD 226 (392) T ss_pred ecCCccceeEEEcCccEEEecCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEeCCCCCchH--HH Confidence 1111233467899999999998887777899999999999999999999999999999999999999987765443 33 Q ss_pred HHHHHHHhcccccccceeecCCCceeEecCCChhHHHHHHHHHHHHHHHHHHhcCChhhcCCccccccccHHHHHHHHHH Q lcl|Aclame:pro 238 RENFESMSSGLQNSHRIALMPVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKATLNNIEQQQQQFYT 317 (429) Q Consensus 238 ~~~~~~~~~g~~~~~~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~fgvp~~~l~~~~~~~~~n~~~~~~~~~~ 317 (429) +++|.+.+.|..|+|+++|+++|++|++++++++|+|++|.+++.+++||++|||||.+||+.+..+ +..++.++|++ T Consensus 227 ~~~~~~~~~~~~n~g~~~vl~~g~~~~~l~~~~~d~q~~e~~~~~~~~Ia~~fgVPp~~lg~~~~~~--~~~e~~~~~~~ 304 (392) T protein:vir:74 227 KASRSRSFMKRSRSGGPVVLDDLEEFTALEIKSNVAQLLSQTDWTSKQYAKVYGLPDSYIGGQGDQQ--SSIQQISGMYA 304 (392) T ss_pred HHHHHHHHhccccCCCeeecCCCceEEEccCChhHHHHHHHHHHHHHHHHHHhCCCHHHhCCCCCcc--cHHHHHHHHHH Confidence 5667777888889999999999999999999999999999999999999999999999998754333 45667899999 Q ss_pred HHHhHHHHHHHHHHHHhhccchhhcchhhhhhhhhhHhhhhHHHHHHHHHHHHhCCCCCHHHHHHHh---CCCCCCCcce Q lcl|Aclame:pro 318 DTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKE---DLPPEAGGDR 394 (429) Q Consensus 318 ~~l~P~~~~i~~~l~~~ll~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~---Gl~~~~~gD~ 394 (429) ++|.|+++.|+++|+++|++. ++||...+++.|..++++.+.+++++|++|+||+|+++ |+.| ++ T Consensus 305 ~~l~p~~~~ie~~l~~~l~~~--------~~~~~~~~~~~d~~~~~~~~~~l~~~g~~t~near~~~~~~g~~p----ne 372 (392) T protein:vir:74 305 SALNRYLRPAISELEYKLSDH--------ISVNMRPAIDPLGDNYLSTISTATRWGALAENQATFVLQEAGYIP----KD 372 (392) T ss_pred HHHHHHHHHHHHHHHHhccch--------hcccchhhhcCCHHHHHHHHHHHHhCCCcCHHHHHHHHHhCCCCc----cc Confidence 999999999999999998743 67888888999999999999999999999999999987 4332 21 Q ss_pred eeeccccccccccccccCCCCCCCCCCC Q lcl|Aclame:pro 395 LLVNGNMLPIDMAGQAYLKGGDTNGEVS 422 (429) Q Consensus 395 ~~~~~n~~~~~~~~~~~~~~g~~~~~~~ 422 (429) ....-|+. ..++|+++...| T Consensus 373 ~r~~enl~--------~~~~Gd~~~p~p 392 (392) T protein:vir:74 373 LPAPENTN--------KKTTGQSNEPVP 392 (392) T ss_pred cchhcCCC--------CCCCCCCCCCCC Confidence 21122221 234444444444 No 66 >protein:vir:3989 Length: 392 # NCBI annotation: putative portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:319 # MgeName: BK5-T # Cross-refs: genbank:acc:NP_116497;genbank:gi:14251130;genbank:GeneID:921299 Probab=100.00 E-value=6.9e-78 Score=443.59 Aligned_cols=384 Identities=16% Similarity=0.133 Sum_probs=304.1 Q ss_pred Cchhhhhhccccccccccccc---CCchHHHHHhhcCCCCcceechhhhhccHHHHHHHHHHHHhhccCceEEEecCCce Q lcl|Aclame:pro 1 MDSVKKFFNFEKRQTSQVIEL---NKDDEKLLEWLGISPSTISVKGKNALKVATVFACIKILSESVSKLPLKIYQEDEYG 77 (429) Q Consensus 1 Mg~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~ 77 (429) ||||+++++..+......... ......+..++. ..++..++.+.|+++++|++||++||++||++|+++++.+. T Consensus 3 m~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~al~~~~v~~~i~~ia~~ia~lp~~~~~~~~-- 79 (392) T protein:vir:39 3 LPILNFINQTNDPPEVGSVQSYFPDGNDAQIMESLL-GDNNEWVSARAALRNSDLFSIILQLSSDLAIVKINAEKKKN-- 79 (392) T ss_pred chhhhhhhcccccccccccccccccCchhhhhhhhc-CCCCceechHHhhccHHHHHHHHHHHHhhccCceeeccchh-- Confidence 999988765433332222211 122233334433 23566788999999999999999999999999999986543 Q ss_pred eeeeecchhhhhhcccCcCCCCHHHHHHHHHHHHHhhCCeEEEEeeCCCCceEEEEeeCCcceEEEEcCCcceeeeeeEE Q lcl|Aclame:pro 78 IQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVYIDDVGLLNSKTKMW 157 (429) Q Consensus 78 ~~~~~~~~~~~~l~~~PN~~~s~~~~~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~l~p~~v~~~~~~~~~~~~~~~~~ 157 (429) +.|+.+||++||+++||+.++.+++++||+|++++|+..|++.+|||++|++|++..+.++.... .... T Consensus 80 ----------~~l~~~PN~~~t~~~f~~~~~~~lll~Gna~~~i~r~~~g~~~~L~~l~~~~v~~~~~~~~~~~~-y~~~ 148 (392) T protein:vir:39 80 ----------QGIIDNPSTNANKHGFWQSMFAQLLLGGEAFAYRWRNANGADMKWEYLRPSQVNTYYFEYENGMY-YNIT 148 (392) T ss_pred ----------hhHhhcCCCCCCHHHHHHHHHHHhhhcCcEEEEEEECCCCcEEEEEEEcCceeEEEEcCCCceEE-EEEE Confidence 23567999999999999999999999999999999999999999999999999998876432211 0111 Q ss_pred EeecccCceEEEccceEEEeecCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHHccCCcceEEEeCCCCCHHHHHHH Q lcl|Aclame:pro 158 YVVNTGGQQRVLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGDLNEDAKKVF 237 (429) Q Consensus 158 ~~~~~~g~~~~~~~~evih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~~e~~~~~ 237 (429) ......+....|+++||||++++++.+..+|+||+.++...+.+..+++++..++|+||++|+|++++++....++ +. T Consensus 149 ~~~~~~~~~~~~~~~eiih~~~~~~~~~~~G~s~i~~~~~~i~~~~~~~~~~~~~f~ng~~p~gil~~~~~~~~~~--~~ 226 (392) T protein:vir:39 149 FDDPKIEPILQAPQSDLIHMKLLSIDGGKTGISPLYSLRRESKIQRASDRLTISSLNSSLNVPGVLTVKGGGLLSD--KD 226 (392) T ss_pred ecCcccceeEEEccccEEEecCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEeCCCCCchH--HH Confidence 1112233467899999999998888777899999999999999999999999999999999999999987654443 33 Q ss_pred HHHHHHHhcccccccceeecCCCceeEecCCChhHHHHHHHHHHHHHHHHHHhcCChhhcCCccccccccHHHHHHHHHH Q lcl|Aclame:pro 238 RENFESMSSGLQNSHRIALMPVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKATLNNIEQQQQQFYT 317 (429) Q Consensus 238 ~~~~~~~~~g~~~~~~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~fgvp~~~l~~~~~~~~~n~~~~~~~~~~ 317 (429) +++|.+.+.|..++|+++|+++|++|++++.+++|+|++|.+++.+++||++|||||.+||+... +++.+++.++|++ T Consensus 227 ~~~~~~~~~~~~~~g~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgVpp~~lg~~~~--~~~~~~~~~~f~~ 304 (392) T protein:vir:39 227 KASRSRSFMKRSRSGGPVVLDDLEEFTALEIKSNVAQLLSQTDWTSKQYAKVYGLPDSYIGGQGD--QQSSIQQISGMYA 304 (392) T ss_pred HHHHHHHHhccccCCCeeecCCCceEEEccCChhHHHHHHHHHHHHHHHHHHhCCCHHHhCCCCC--cccHHHHHHHHHH Confidence 56677778888899999999999999999999999999999999999999999999999986543 3355677899999 Q ss_pred HHHhHHHHHHHHHHHHhhccchhhcchhhhhhhhhhHhhhhHHHHHHHHHHHHhCCCCCHHHHHHHh---CCCCCCCcce Q lcl|Aclame:pro 318 DTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKE---DLPPEAGGDR 394 (429) Q Consensus 318 ~~l~P~~~~i~~~l~~~ll~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~---Gl~~~~~gD~ 394 (429) +||.|+++.|+++|+++|++. ++||...+.+.|..++++.+.+++.+|++|+||+|+++ |+.|.+ T Consensus 305 ~~l~P~~~~ie~~l~~~L~~~--------~~~d~~~~~~~d~~~~~~~~~~l~~~g~~t~nE~r~~l~~~g~~p~e---- 372 (392) T protein:vir:39 305 SALNRYLRPAISELEYKLSDH--------ISVNMRPAIDPLGDNYLSTISTATRWGALAENQATFVLQEAGYIPKD---- 372 (392) T ss_pred HHHHHHHHHHHHHHHHhcccc--------ccccchhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHHHhcCCCccc---- Confidence 999999999999999998743 57888888888999999999999999999999999987 555421 Q ss_pred eeeccccccccccccccCCCCCCCCCCC Q lcl|Aclame:pro 395 LLVNGNMLPIDMAGQAYLKGGDTNGEVS 422 (429) Q Consensus 395 ~~~~~n~~~~~~~~~~~~~~g~~~~~~~ 422 (429) ....-|+ +..++|+.+...| T Consensus 373 ~r~~e~l--------~~~~~Gd~~~p~p 392 (392) T protein:vir:39 373 LPAPENT--------NKKTTGQSNEPVP 392 (392) T ss_pred cchhcCC--------CCCCCCCCCCCCC Confidence 1111121 1234444444444 No 67 >protein:vir:1023 Length: 392 # NCBI annotation: portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:20 # MgeName: bIL286 # Cross-refs: genbank:acc:NP_076677;genbank:gi:13095786;genbank:GeneID:920364 Probab=100.00 E-value=6.9e-78 Score=443.59 Aligned_cols=384 Identities=16% Similarity=0.133 Sum_probs=304.1 Q ss_pred Cchhhhhhccccccccccccc---CCchHHHHHhhcCCCCcceechhhhhccHHHHHHHHHHHHhhccCceEEEecCCce Q lcl|Aclame:pro 1 MDSVKKFFNFEKRQTSQVIEL---NKDDEKLLEWLGISPSTISVKGKNALKVATVFACIKILSESVSKLPLKIYQEDEYG 77 (429) Q Consensus 1 Mg~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~ 77 (429) ||||+++++..+......... ......+..++. ..++..++.+.|+++++|++||++||++||++|+++++.+. T Consensus 3 m~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~al~~~~v~~~i~~ia~~ia~lp~~~~~~~~-- 79 (392) T protein:vir:10 3 LPILNFINQTNDPPEVGSVQSYFPDGNDAQIMESLL-GDNNEWVSARAALRNSDLFSIILQLSSDLAIVKINAEKKKN-- 79 (392) T ss_pred chhhhhhhcccccccccccccccccCchhhhhhhhc-CCCCceechHHhhccHHHHHHHHHHHHhhccCceeeccchh-- Confidence 999988765433332222211 122233334433 23566788999999999999999999999999999986543 Q ss_pred eeeeecchhhhhhcccCcCCCCHHHHHHHHHHHHHhhCCeEEEEeeCCCCceEEEEeeCCcceEEEEcCCcceeeeeeEE Q lcl|Aclame:pro 78 IQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVYIDDVGLLNSKTKMW 157 (429) Q Consensus 78 ~~~~~~~~~~~~l~~~PN~~~s~~~~~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~l~p~~v~~~~~~~~~~~~~~~~~ 157 (429) +.|+.+||++||+++||+.++.+++++||+|++++|+..|++.+|||++|++|++..+.++.... .... T Consensus 80 ----------~~l~~~PN~~~t~~~f~~~~~~~lll~Gna~~~i~r~~~g~~~~L~~l~~~~v~~~~~~~~~~~~-y~~~ 148 (392) T protein:vir:10 80 ----------QGIIDNPSTNANKHGFWQSMFAQLLLGGEAFAYRWRNANGADMKWEYLRPSQVNTYYFEYENGMY-YNIT 148 (392) T ss_pred ----------hhHhhcCCCCCCHHHHHHHHHHHhhhcCcEEEEEEECCCCcEEEEEEEcCceeEEEEcCCCceEE-EEEE Confidence 23567999999999999999999999999999999999999999999999999998876432211 0111 Q ss_pred EeecccCceEEEccceEEEeecCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHHccCCcceEEEeCCCCCHHHHHHH Q lcl|Aclame:pro 158 YVVNTGGQQRVLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGDLNEDAKKVF 237 (429) Q Consensus 158 ~~~~~~g~~~~~~~~evih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~~e~~~~~ 237 (429) ......+....|+++||||++++++.+..+|+||+.++...+.+..+++++..++|+||++|+|++++++....++ +. T Consensus 149 ~~~~~~~~~~~~~~~eiih~~~~~~~~~~~G~s~i~~~~~~i~~~~~~~~~~~~~f~ng~~p~gil~~~~~~~~~~--~~ 226 (392) T protein:vir:10 149 FDDPKIEPILQAPQSDLIHMKLLSIDGGKTGISPLYSLRRESKIQRASDRLTISSLNSSLNVPGVLTVKGGGLLSD--KD 226 (392) T ss_pred ecCcccceeEEEccccEEEecCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEeCCCCCchH--HH Confidence 1112233467899999999998888777899999999999999999999999999999999999999987654443 33 Q ss_pred HHHHHHHhcccccccceeecCCCceeEecCCChhHHHHHHHHHHHHHHHHHHhcCChhhcCCccccccccHHHHHHHHHH Q lcl|Aclame:pro 238 RENFESMSSGLQNSHRIALMPVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKATLNNIEQQQQQFYT 317 (429) Q Consensus 238 ~~~~~~~~~g~~~~~~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~fgvp~~~l~~~~~~~~~n~~~~~~~~~~ 317 (429) +++|.+.+.|..++|+++|+++|++|++++.+++|+|++|.+++.+++||++|||||.+||+... +++.+++.++|++ T Consensus 227 ~~~~~~~~~~~~~~g~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgVpp~~lg~~~~--~~~~~~~~~~f~~ 304 (392) T protein:vir:10 227 KASRSRSFMKRSRSGGPVVLDDLEEFTALEIKSNVAQLLSQTDWTSKQYAKVYGLPDSYIGGQGD--QQSSIQQISGMYA 304 (392) T ss_pred HHHHHHHHhccccCCCeeecCCCceEEEccCChhHHHHHHHHHHHHHHHHHHhCCCHHHhCCCCC--cccHHHHHHHHHH Confidence 56677778888899999999999999999999999999999999999999999999999986543 3355677899999 Q ss_pred HHHhHHHHHHHHHHHHhhccchhhcchhhhhhhhhhHhhhhHHHHHHHHHHHHhCCCCCHHHHHHHh---CCCCCCCcce Q lcl|Aclame:pro 318 DTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKE---DLPPEAGGDR 394 (429) Q Consensus 318 ~~l~P~~~~i~~~l~~~ll~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~---Gl~~~~~gD~ 394 (429) +||.|+++.|+++|+++|++. ++||...+.+.|..++++.+.+++.+|++|+||+|+++ |+.|.+ T Consensus 305 ~~l~P~~~~ie~~l~~~L~~~--------~~~d~~~~~~~d~~~~~~~~~~l~~~g~~t~nE~r~~l~~~g~~p~e---- 372 (392) T protein:vir:10 305 SALNRYLRPAISELEYKLSDH--------ISVNMRPAIDPLGDNYLSTISTATRWGALAENQATFVLQEAGYIPKD---- 372 (392) T ss_pred HHHHHHHHHHHHHHHHhcccc--------ccccchhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHHHhcCCCccc---- Confidence 999999999999999998743 57888888888999999999999999999999999987 555421 Q ss_pred eeeccccccccccccccCCCCCCCCCCC Q lcl|Aclame:pro 395 LLVNGNMLPIDMAGQAYLKGGDTNGEVS 422 (429) Q Consensus 395 ~~~~~n~~~~~~~~~~~~~~g~~~~~~~ 422 (429) ....-|+ +..++|+.+...| T Consensus 373 ~r~~e~l--------~~~~~Gd~~~p~p 392 (392) T protein:vir:10 373 LPAPENT--------NKKTTGQSNEPVP 392 (392) T ss_pred cchhcCC--------CCCCCCCCCCCCC Confidence 1111121 1234444444444 No 68 >protein:vir:4995 Length: 384 # NCBI annotation: putative portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:109 # MgeName: Sfi21 # Cross-refs: genbank:acc:NP_049969;genbank:gi:9632941;genbank:GeneID:1262104 Probab=100.00 E-value=2.3e-78 Score=446.21 Aligned_cols=377 Identities=18% Similarity=0.133 Sum_probs=311.2 Q ss_pred CchhhhhhcccccccccccccCCchHHHHHhhcCCCCcceechhhhhccHHHHHHHHHHHHhhccCceEEEecCCceeee Q lcl|Aclame:pro 1 MDSVKKFFNFEKRQTSQVIELNKDDEKLLEWLGISPSTISVKGKNALKVATVFACIKILSESVSKLPLKIYQEDEYGIQR 80 (429) Q Consensus 1 Mg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~~~~ 80 (429) ||||++.+.............. ......+++.+.+...++.+.|+++++|++||++||++||++||+++++.. T Consensus 1 Mglf~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~v~~~~al~~~~V~~~i~~Ia~~ia~l~~~~~~~~~----- 73 (384) T protein:vir:49 1 MPIFNITNLATESPPSNQDSFF--DITDPEFLDALNGSEWVSAETALKNSDLFSIISQLSNDLATAKITTSRKQL----- 73 (384) T ss_pred CccccccccCcccccccchhhc--cccchhhcccccCCceechhhhhccHHHHHHHHHHHHHHhhCceeeecchh----- Confidence 9999875432111111111111 111122345566677889999999999999999999999999999987543 Q ss_pred eecchhhhhhcccCcCCCCHHHHHHHHHHHHHhhCCeEEEEeeCCCCceEEEEeeCCcceEEEEcCCcceeeeeeEEEee Q lcl|Aclame:pro 81 GTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVYIDDVGLLNSKTKMWYVV 160 (429) Q Consensus 81 ~~~~~~~~~l~~~PN~~~s~~~~~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~l~p~~v~~~~~~~~~~~~~~~~~~~~ 160 (429) ..|+.+||++||+++||+.++.+++++||+|++++++..|++.+|||++|++|++..+.+..... ....... T Consensus 74 -------~~l~~~PN~~~t~~~f~~~l~~~lll~Gna~~~i~r~~~g~~~~L~~l~~~~v~v~~~~~~~~~~-y~~~~~~ 145 (384) T protein:vir:49 74 -------QGIVDNPSNNANRFNFYQSIFAQMLLGGEAFAYRWRNENGRDMKWEYLRPSQVSFNRLDNQNGLY-YNITFDD 145 (384) T ss_pred -------hhhhhccCCCCCHHHHHHHHHHHhhhcCCeEEEEEECCCCcEEEEEEEcCceeEEEEcCCCceEE-EEEEecC Confidence 23667999999999999999999999999999999999999999999999999998765432111 0001111 Q ss_pred cccCceEEEccceEEEeecCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHHccCCcceEEEeCCCCCHHHHHHHHHH Q lcl|Aclame:pro 161 NTGGQQRVLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGDLNEDAKKVFREN 240 (429) Q Consensus 161 ~~~g~~~~~~~~evih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~~e~~~~~~~~ 240 (429) ...+..+.|+++||||++.+++.+..+|+||+.++...+.++.++.++..++|+||++|+|++++++..++++.++ . T Consensus 146 ~~~~~~~~~~~~eVih~~~~~~~~~~~G~s~i~~~~~~i~~~~~~~~~~~~~~~ng~~~~~il~~~~~~~~~~~~~---~ 222 (384) T protein:vir:49 146 PRIPPKQHVPQGDILHFRLLSVDGGLTSVSPLMALGRELNIQKASDKLTLNALKNALNANGILKIKGGGLLDFKTK---Q 222 (384) T ss_pred ccccceeEecCccEEEecCCCCCCceeeccHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEeCCCCChHHHHH---H Confidence 2335668899999999998888888999999999999999999999999999999999999999999888876643 3 Q ss_pred HHHHhcccccccceeecCCCceeEecCCChhHHHHHHHHHHHHHHHHHHhcCChhhcCCcc--ccccccHHHHHHHHHHH Q lcl|Aclame:pro 241 FESMSSGLQNSHRIALMPVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLS--KATLNNIEQQQQQFYTD 318 (429) Q Consensus 241 ~~~~~~g~~~~~~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~fgvp~~~l~~~~--~~~~~n~~~~~~~~~~~ 318 (429) +.+.+.+..|+|+++++++|++|+++++++.|+|++|.+++++++||++|||||.+||+.+ .+++++.+++...|++. T Consensus 223 ~~~~~~~~~n~~~~~vl~~g~~~~~l~~~~~d~q~~e~~~~~~~~Ia~~fgVp~~~lg~~~~~~~~~~~~~~~~~~~i~~ 302 (384) T protein:vir:49 223 SRSRQAMKQMQGGPLVLDDLEDFTPLEIKSNVAQLLSQADWTTGQFAKVYGIPESVVGGEGDKQSSLEMIYNIYFKAVSR 302 (384) T ss_pred HHHHHhcccCCccceecCCCceEEEccCChhhHHHHHHHHHHHHHHHHHhCCCHHHhCCCCCccccHHHHHHHHHHHHHH Confidence 4455667789999999999999999999999999999999999999999999999998753 34677889999999999 Q ss_pred HHhHHHHHHHHHHHHhhc---cchhhcchhhhhhhhhhHhhhhHHHHHHHHHHHHhCCCCCHHHHHHHhCCCCCCCcc-- Q lcl|Aclame:pro 319 TLQATLTMYEQEMTYKLF---LDSELDKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEAGGD-- 393 (429) Q Consensus 319 ~l~P~~~~i~~~l~~~ll---~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~Gl~~~~~gD-- 393 (429) ++.|++..|+++|++++. .......+.+++|+.+.+++.+..++.++...+...|+++ ||+|+.+|++|+|||| T Consensus 303 ~l~pi~~~i~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~t~~e~~~~l~~~g~~~-ne~r~~~~~~p~~gGd~~ 381 (384) T protein:vir:49 303 FLRPFVSELSKKLSCEVDADILPAVDPTGSNYIGLINSMVKTGTLAQNQGLYVLQQAEILP-KDLPEGETDSTLKGGETN 381 (384) T ss_pred HHHHHHHHHHHHhchhhhhhhhhhhhccchHHHHHHHHHhhcCcccHHHHHHHHhhCCCCC-hhHHHHcCCCCCCCCCCC Confidence 999999999999999873 3344455788999999999999999999999999999976 9999999999999876 Q ss_pred eee Q lcl|Aclame:pro 394 RLL 396 (429) Q Consensus 394 ~~~ 396 (429) +.| T Consensus 382 ~~~ 384 (384) T protein:vir:49 382 EQY 384 (384) T ss_pred CCC Confidence 223 No 69 >protein:vir:100691 Length: 535 # NCBI annotation: hypothetical protein # Family: family:all:2446 # MgeID: mge:1633 # MgeName: LP65 # Cross-refs: genbank:acc:YP_164747;genbank:gi:56693160;genbank:GeneID:3197324 Probab=100.00 E-value=1.5e-77 Score=441.80 Aligned_cols=421 Identities=13% Similarity=0.103 Sum_probs=308.3 Q ss_pred Cchhhhhh--------------cccccccccccccCCchHHHHHhhcCCCCcceechhhhhccHHHHHHHHHHHHhhccC Q lcl|Aclame:pro 1 MDSVKKFF--------------NFEKRQTSQVIELNKDDEKLLEWLGISPSTISVKGKNALKVATVFACIKILSESVSKL 66 (429) Q Consensus 1 Mg~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~ 66 (429) |.+...-- +...........-+.....+...+...+ .+....+.+....++|+|+.++++.++++ T Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~-~~~~~i~t~~~~va~~~~i~~~s~~~~~~ 112 (535) T protein:vir:10 34 KAIRPGRASARDTVDGIDIADGNVAGQYSVASISDVLSTKKLLKAYADND-IVQAIIRTRTNQVLTYSNPSRYNRNGVGF 112 (535) T ss_pred hhhhhhhhhhhccccccccccCCcccccccCccccccCHHHHHHHhccCh-hHHHHHHHHHHHHHHHHHHHHHhcccCcc Confidence 22211000 0000000000111112223333333222 11112234456778999999999999999 Q ss_pred ceEEEecCCce--eeeeecchhhhhhcccCcCCCCHHH----HHHHHHHHHHh-hCCeEEEEeeCCCCceEEEEeeCCcc Q lcl|Aclame:pro 67 PLKIYQEDEYG--IQRGTKHYLNNLLRLRPNPYMSSMN----FFGSLEAQKNL-YGNSYANIEFDRKGKVQALWPIDASK 139 (429) Q Consensus 67 ~~~~~~~~~~~--~~~~~~~~~~~~l~~~PN~~~s~~~----~~~~~~~~~l~-~G~~~~~~~~~~~g~~~~l~~l~p~~ 139 (429) |+++++.+.++ ......|+++.+|+.+||++|++++ |+++++.++++ .|++|++++++..|++.+||||+|++ T Consensus 113 ~i~l~~~~~~~~~~~~~~~~~l~~lL~~~PN~~~~~~~~~~~~~~~lv~d~l~~~g~ay~~i~r~~~G~~~~L~~l~p~~ 192 (535) T protein:vir:10 113 KVELKDATKVMSKAQIKRAHEIEDFIYNTGSEYYEWRDTFPRLLTKIINDMYVQDQINIERIFKNDSNELDHFNAVDASK 192 (535) T ss_pred eeEEEeccCCCcchhhhhhhHHHHHHHhCCCCCCChhHHHHHHHHHHHHHHHhhCCceEEEEEECCCCcEEEEEEeCCce Confidence 99999876543 2344568899999999999999876 45566666655 45789999999999999999999999 Q ss_pred eEEEEcCCcceeeeeeEEEeecccCceEEEccceEEEeecCCCC---CcccccCHHHHHHHHHHHHHHHHHHHHHHHHcc Q lcl|Aclame:pro 140 VTVYIDDVGLLNSKTKMWYVVNTGGQQRVLKPEEILHFKNGITL---DGLVGVPTMEYLKSTLENSASADKFINNFYKQG 216 (429) Q Consensus 140 v~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~evih~~~~~~~---~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng 216 (429) |++..+.+... ....+|.+..++....|+++|||||++++.. ++.+|+||+.++...+..+.++++++.++|+|| T Consensus 193 V~v~~d~~~~~--~~~~~~~~~~~~~~~~~~~~eiih~~~~~~~~~~~~~~G~Spi~~~~~~i~~~~aa~~~~~~~f~ng 270 (535) T protein:vir:10 193 VVISYSPRSKD--QPRKFEQFVSETKSVKFSERNLTFINYWNLSDTDRRGYGYSPVEASIPLIRAIYDTEQFNARFFSQG 270 (535) T ss_pred eEEEEcCcccc--CceEEEEEecCceeEEECcccEEEEeccCCCCcccccccccHHHHHHHHHHHHHHHHHHHHHHHhcc Confidence 99988765432 2334556666777788999999999976543 356799999999999999999999999999999 Q ss_pred CCcceEEEeCCC----CCHHHHHHHHHHHHHHhcccccccceeecC-CCceeEecCCChhHHHHHHHHHHHHHHHHHHhc Q lcl|Aclame:pro 217 LQVKGLVQYVGD----LNEDAKKVFRENFESMSSGLQNSHRIALMP-VGYQFQPISLNMSDAQFLENTELTIRQIATAFG 291 (429) Q Consensus 217 ~~~~~~~~~~~~----~~~e~~~~~~~~~~~~~~g~~~~~~~~vl~-~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~fg 291 (429) ++|+|+|++++. +++++.+++++.|++.++|..|+|+++|+. +|++|+++++++.|+||+|.+++++++||++|| T Consensus 271 ~~p~giL~~~~~~~~~ls~e~~e~lk~~~~~~~~G~~nag~~~vl~~~g~~~~~l~~~~~D~qfle~~~~~~~eIa~afg 350 (535) T protein:vir:10 271 GTTRGILVIDQDGDAQANQMMLAGIRRQWTSQGSGLGGAWKIPILAAKDAKFVNMTQNSRDMEFDKFLNFMIYDTAAIFQ 350 (535) T ss_pred CCccEEEEecCCCCcccCHHHHHHHHHHHHHHhcCcccccccccccCCCceEEecCCChhHHHHHHHHHHHHHHHHHHhC Confidence 999999998753 789999999999999999999999987765 799999999999999999999999999999999 Q ss_pred CChhhcCCcccccccc------------HHHHHHHHHHHHHhHHHHHHHHHHHHhhccchhhcchhhhhhhhhhHhhhhH Q lcl|Aclame:pro 292 IKMHQLNDLSKATLNN------------IEQQQQQFYTDTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAILRADI 359 (429) Q Consensus 292 vp~~~l~~~~~~~~~n------------~~~~~~~~~~~~l~P~~~~i~~~l~~~ll~~~~~~~~~~~~fd~~~l~~~d~ 359 (429) |||.+||..+.++|+| .+++...|++.||.|+++.||++||++|+...+ .+++|+++.+++.|. T Consensus 351 VPp~~lG~~~~at~sn~~~~~~~~~~s~~E~~~~~~~~~~L~P~l~~ie~~ln~~Ll~~~~----~~~~f~f~~l~~~d~ 426 (535) T protein:vir:10 351 MQPEEINFPNNGGSTGKSGTKSVNEGSTAKAKLESSKDKGLTPLLSFIEQVINDKIMRYVD----TDYRFSFTLGDAQDK 426 (535) T ss_pred CCHHHhccccCcccccchhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccC----CeEEEEeccccccCH Confidence 9999999888777654 567777899999999999999999999986543 245666788999999 Q ss_pred HHHHHHHHHHHhCCCCCHHHHHHHhCCCCCCCcceeeecc---cccccccccccc------CCCCCCCCCCC-------- Q lcl|Aclame:pro 360 KTRYEAYRTGIQGGFLKPNEARSKEDLPPEAGGDRLLVNG---NMLPIDMAGQAY------LKGGDTNGEVS-------- 422 (429) Q Consensus 360 ~~~~~~~~~~~~~g~~t~NE~R~~~Gl~~~~~gD~~~~~~---n~~~~~~~~~~~------~~~g~~~~~~~-------- 422 (429) ++++++++.+. +|+||+||+|+++||||+||||+++... ++......+++. ..+.+...+.+ T Consensus 427 ~~r~~~~~~~~-~g~lT~NE~R~~~gl~piegGD~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~q~~~~~~~ 505 (535) T protein:vir:10 427 LQEEQVWKLKL-ANGYFINEYRKDHGLKTVDGLDVPGFIGSAENFINATGFGQPNVPDSSDDSGSTLGERERQERIQHSK 505 (535) T ss_pred HHHHHHHHHHH-cCCCCHHHHHHHhCCCCCCCccccccccchhhcccccccccccCCCCCCCccccCCccccCccccccc Confidence 99998887665 6779999999999999999999865432 221111110000 00000000000 Q ss_pred -CCCCCCC Q lcl|Aclame:pro 423 -KEGNEGN 429 (429) Q Consensus 423 -~~~~~~n 429 (429) .++++++ T Consensus 506 ~~~~g~~~ 513 (535) T protein:vir:10 506 DYEKGKDD 513 (535) T ss_pred ccccCCCC Confidence 0111111 No 70 >protein:vir:9641 Length: 395 # NCBI annotation: portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:173 # MgeName: 315.1 # Cross-refs: genbank:acc:NP_795403;genbank:gi:28876176;genbank:GeneID:1257709 Probab=100.00 E-value=1.5e-78 Score=447.26 Aligned_cols=381 Identities=14% Similarity=0.154 Sum_probs=293.4 Q ss_pred CchhhhhhcccccccccccccCCchHHHHHhhcCCCCcceechhhhhccHHHHHHHHHHHHhhccCceEEEecCCceeee Q lcl|Aclame:pro 1 MDSVKKFFNFEKRQTSQVIELNKDDEKLLEWLGISPSTISVKGKNALKVATVFACIKILSESVSKLPLKIYQEDEYGIQR 80 (429) Q Consensus 1 Mg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~~~~ 80 (429) ||||++|+.... . ...... +.+ ....++.+.|+++++|++||++||++||++||++++++++ . T Consensus 1 Mgl~d~~~~~~~--~--~~~~~~----~~~------~~~~~~~~~~l~~~~v~~~i~~Ia~~ia~lp~~v~~~~~~---~ 63 (395) T protein:vir:96 1 MGILDFFSFKKS--G--TLSDDD----SGS------TTSEKLTNVVLKEDALYKCVNYLARIISKSTFRIKAPEKL---T 63 (395) T ss_pred CcchhhhcCCCC--c--cccccc----ccc------chhhhcchhhhhhHHHHHHHHHHHHhhccceeEEEeCCcc---c Confidence 999998754221 1 111110 111 1113556788999999999999999999999999986543 3 Q ss_pred eecchhhhhhcccCcCCCCHHHHHHHHHHHHHhhCCeEEEEeeCCCCceEEEEeeCCcceEEEEcCCcceeeeeeEEEee Q lcl|Aclame:pro 81 GTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVYIDDVGLLNSKTKMWYVV 160 (429) Q Consensus 81 ~~~~~~~~~l~~~PN~~~s~~~~~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~l~p~~v~~~~~~~~~~~~~~~~~~~~ 160 (429) ...|+++++|+.+||++||+++||+.++.+++++||+|+++.++..+.+...++.... .... ....+.. T Consensus 64 ~~~~~~~~lL~~~PN~~~t~~~f~~~l~~~lll~Gna~~~~~~~~~~~~~~~~~~~~~-----~~~~------~~~~v~~ 132 (395) T protein:vir:96 64 ENQKDWLYWINTKANPNQSASQFWVEVVQKLLVDGETLIFVIPGKGIYVADAFTQDKK-----LSGN------KFKVSRV 132 (395) T ss_pred cccchHHHHHhhcCCCCCCHHHHHHHHHHHHhhcCceEEEEEcCCceecCCccccccc-----cccc------eeeeeee Confidence 4568999999999999999999999999999999999999998754322222221110 0000 0111111 Q ss_pred cccCceEEEccceEEEeecCCCCCcccccCHHHHHHHHHHHHHH------HHHHHHHHHHccCCcceEEEeCCCCCHHHH Q lcl|Aclame:pro 161 NTGGQQRVLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSAS------ADKFINNFYKQGLQVKGLVQYVGDLNEDAK 234 (429) Q Consensus 161 ~~~g~~~~~~~~evih~~~~~~~~~~~G~s~~~~~~~~i~~~~~------~~~~~~~~~~ng~~~~~~~~~~~~~~~e~~ 234 (429) ......+.++++||+|||++++....++.+++..+...+....+ +.++..+++.+++.+++++..+....++.. T Consensus 133 ~~~~~~~~~~~~dvih~k~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (395) T protein:vir:96 133 QGQTYEKIFTFDQVIYLKNDNSDLMLKVESLWEEYGELLGHVINNQKIANQIRFTMTPPKDKVRERAQENSDGGRQPKSD 212 (395) T ss_pred ccceeeeEeccCceEEecccCCccccccccccchHHHHHHHHHHHHHHHHHHHHHhhhcccccccceeeccCchhhHHHH Confidence 22223567999999999988776666666665555544444333 446778899999999999998877777766 Q ss_pred HHHHHHHHHHhcccccccceeecCCCceeEecCCChhHHHHHHHHHHH------HHHHHHHhcCChhhcCCccccccccH Q lcl|Aclame:pro 235 KVFRENFESMSSGLQNSHRIALMPVGYQFQPISLNMSDAQFLENTELT------IRQIATAFGIKMHQLNDLSKATLNNI 308 (429) Q Consensus 235 ~~~~~~~~~~~~g~~~~~~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~------~~~Ia~~fgvp~~~l~~~~~~~~~n~ 308 (429) ++..+++.+... .+.+.++++++|++|++++.++.|+|++|.+++. .++||++|||||.+|+ ++++|. T Consensus 213 ~~~~~~~~~~~~--~~~~~v~~l~~g~~~~~l~~~~~d~q~~e~~~~~~~~~~~~~eIa~~fgVPp~~l~----~~~sn~ 286 (395) T protein:vir:96 213 KDFFKRTIEKIR--TESVVGIPVTANTNYEEYGSKNTGSVKSYVDDIKKLKDQYMAEFAEMLGIPISLLH----GDIADN 286 (395) T ss_pred HHHHHHHHHHhh--cCCcceEEccCCceeEecccChhhhhhhhHHHHHHHHHHHHHHHHHHhCCCHHHhc----CCCccH Confidence 666555555443 2456688899999999999999999988888765 5899999999999996 478999 Q ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHhhccchhhcchhhhhhhhhhHhhhhHHHHHHHHHHHHhCCCCCHHHHHHHhCCCC Q lcl|Aclame:pro 309 EQQQQQFYTDTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPP 388 (429) Q Consensus 309 ~~~~~~~~~~~l~P~~~~i~~~l~~~ll~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~Gl~~ 388 (429) +++.++|+++||.|++.+||++|+++||++.++..+++ ||++.+++.|.+++++.+.+++++|++|+||+|+++|+|| T Consensus 287 e~~~~~f~~~~L~P~~~~ie~~l~~~Ll~~~e~~~~~~--f~~~~l~~~d~~~~~~~~~~~~~~G~~T~NE~R~~~gl~p 364 (395) T protein:vir:96 287 QKNYELLLEGPIESLITNIVDGLEYAIFDKSETLEGSF--IKVTGLKNYDLFSISSQADKLISSGFVFIDEVREEIGLPE 364 (395) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcCChhhhcCcee--EeecchhccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCC Confidence 99999999999999999999999999999887766654 6668899999999999999999999999999999999999 Q ss_pred CCC--cceeeeccccccccccccccCCCCCCCCCCCC Q lcl|Aclame:pro 389 EAG--GDRLLVNGNMLPIDMAGQAYLKGGDTNGEVSK 423 (429) Q Consensus 389 ~~~--gD~~~~~~n~~~~~~~~~~~~~~g~~~~~~~~ 423 (429) +|+ ||++++|+|++|++. +||+++++.++ T Consensus 365 i~~~~gD~~~~~~N~~~~~~------~gge~~~~~~~ 395 (395) T protein:vir:96 365 LPDGLGKVLYMTKNYESVLE------RGGEVDEEVET 395 (395) T ss_pred CCCCCCceeeecccceechh------ccCCCCCCCCC Confidence 966 999999999999873 57776666555 No 71 >protein:vir:1082 Length: 359 # NCBI annotation: portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:21 # MgeName: bIL309 # Cross-refs: genbank:acc:NP_076736;genbank:gi:13095846;genbank:GeneID:920394 Probab=100.00 E-value=9.9e-78 Score=442.76 Aligned_cols=352 Identities=19% Similarity=0.243 Sum_probs=290.4 Q ss_pred CchhhhhhcccccccccccccCCchHHHHHhhcCCCCcceechhhhhccHHHHHHHHHHHHhhccCceEEEecCCceeee Q lcl|Aclame:pro 1 MDSVKKFFNFEKRQTSQVIELNKDDEKLLEWLGISPSTISVKGKNALKVATVFACIKILSESVSKLPLKIYQEDEYGIQR 80 (429) Q Consensus 1 Mg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~~~~ 80 (429) ||||++|++ +.. .. ...........+.+.+...|+.+.|+++++||+||++||++||++|+. T Consensus 1 M~~~~~f~~---r~~--~~--~~~~~~~~~~~~~~~~~~~v~~~~al~~~av~~cv~~ia~~ia~~p~~----------- 62 (359) T protein:vir:10 1 MSILNPFER---RSS--IT--PNNYYPFMVQNGSIVPNSLVDATEALKNSDLYAVTSLISSDIAGTRFI----------- 62 (359) T ss_pred Ccccchhhc---ccc--CC--CCcchhhhhccccccCCcccCHHHhhcchHHHHHHHHHHHhhhcCccc----------- Confidence 999986532 211 11 111222222344566777889999999999999999999999999983 Q ss_pred eecchhhhhhcccCcCCCCHHHHHHHHHHHHHhhCCeEEEEeeCCCCceEEEEeeCCcceEEEEcCCcceeeeeeEEEee Q lcl|Aclame:pro 81 GTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVYIDDVGLLNSKTKMWYVV 160 (429) Q Consensus 81 ~~~~~~~~~l~~~PN~~~s~~~~~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~l~p~~v~~~~~~~~~~~~~~~~~~~~ 160 (429) .|+++++|+.+||++||+++||+.++.+++++||+|++++|+..|.+.+|||++|+.|++..+++.. .+.+.. T Consensus 63 --~~~~~~~L~~~PN~~~t~~~f~~~~~~~lll~Gnay~~i~r~~~g~~~~l~~l~~~~v~i~~~~~~~-----~y~~~~ 135 (359) T protein:vir:10 63 --GNQVFTSVLNNPSHLTNAFSFWQTAILNLLLNGNVFLAILKGDNSLMKELRLIPSNAITIDLTDDTL-----TYEVNQ 135 (359) T ss_pred --cchHHHHHhhcccccCCHHHHHHHHHHhccccCceEEEEEECCCCeEEEEEEeCCceEEEEEcCCeE-----EEEEEe Confidence 3677788888999999999999999999999999999999999999999999999999998776421 222334 Q ss_pred cccCceEEEccceEEEeecCC----CCCcccccCHHHHHHHHHHHHHHHHHHHHHHHHccCCcceEEEeCC-CCCHHHHH Q lcl|Aclame:pro 161 NTGGQQRVLKPEEILHFKNGI----TLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVG-DLNEDAKK 235 (429) Q Consensus 161 ~~~g~~~~~~~~evih~~~~~----~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~-~~~~e~~~ 235 (429) ..++..+.|+++|||||+.++ +.++.+|+||+.++..++....+++++..++|+||++|+|++++++ .+++++.+ T Consensus 136 ~~~~~~~~~~~~evih~~~~~~~~~~~dg~~G~spi~~~~~~i~~~~~~~~~~~~~f~ng~~~~gil~~~~~~l~~e~~~ 215 (359) T protein:vir:10 136 FDDYPSAKYNASEMIHVKIMAYGVDTLHNLVGHSPLESLTSEIGQQKEANRLSLSTLKGALNPTSVVKVPQGTLSSEAKD 215 (359) T ss_pred cCCceEEEEcccceEEeccCCCCCCccCccccccHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEeCCCCCCHHHHH Confidence 456778899999999999654 3477899999999999999999999999999999999999999975 68999999 Q ss_pred HHHHHHHHHhcccccccceeecCCCceeEecCCChhHHHHHHHHHHHHHHHHHHhcCChhhcCCccc--cccccHHHHHH Q lcl|Aclame:pro 236 VFRENFESMSSGLQNSHRIALMPVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSK--ATLNNIEQQQQ 313 (429) Q Consensus 236 ~~~~~~~~~~~g~~~~~~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~fgvp~~~l~~~~~--~~~~n~~~~~~ 313 (429) ++++.|++.++| .|+|+++||++|++|+++++++.|+|++|.+++++++||++|||||.+|++.++ +++++.+++.. T Consensus 216 ~~~~~~~~~~~~-~n~g~~~vl~~g~~~~~l~~~~~d~q~le~~~~~~~~Ia~~fgVPp~~lg~~~~~~~~~~~~e~~~~ 294 (359) T protein:vir:10 216 SIRKEFEKANGG-NNSGRVMVLDQSADFSTVSINADVANYLNSMNWGRTQIAKAFGVSDSYLNGTGDQQSSLDQIKDLYV 294 (359) T ss_pred HHHHHHHHHhCc-cccCCceecCCCcceeeecCCHHHHHHHHHHHHHHHHHHHHhCCCHHHhCCCCcccccHHHHHHHHH Confidence 999999887765 799999999999999999999999999999999999999999999999986543 46777888888 Q ss_pred HHHHHHHhHHHHHHHHHHHHhhccchhhcchhhhhhhhhhHhhhhHHHHHHHHHHHHhCCCCCHHHHHHHhCCCCCC Q lcl|Aclame:pro 314 QFYTDTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEA 390 (429) Q Consensus 314 ~~~~~~l~P~~~~i~~~l~~~ll~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~Gl~~~~ 390 (429) .++..+|.|++..|+.+|++++. ...+..++||. ......+.+++++|++|+||+|+++|++|+= T Consensus 295 ~~l~~~l~p~~~~l~~~l~~~~~----~~~~~~~~~d~--------~~~~~~~~~~~~~G~~t~NE~R~~l~~~pv~ 359 (359) T protein:vir:10 295 NALNRFIEPLISELRIKCDSSIG----VDMSPITDYSN--------SVFKADILNWVKEGIIEPTEAKTLLESKGII 359 (359) T ss_pred HHHHHHHHHHHHHHHHHhhhhhc----ccchhhhhcCH--------HHHHHHHHHHHhCCCcCHHHHHHHhCCCCCC Confidence 88888888887777777766543 22344555553 2333446679999999999999999999986 No 72 >protein:vir:78310 Length: 376 # NCBI annotation: gp3 # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:1850 # MgeName: B025 # Cross-refs: genbank:acc:YP_001468642;genbank:gi:157325220;genbank:GeneID:5601655 Probab=100.00 E-value=3.1e-78 Score=445.52 Aligned_cols=368 Identities=15% Similarity=0.175 Sum_probs=291.8 Q ss_pred CchhhhhhcccccccccccccCCchHHHHHhhcCCCCcceechhhhhccHHHHHHHHHHHHhhccCceEEEecCCceeee Q lcl|Aclame:pro 1 MDSVKKFFNFEKRQTSQVIELNKDDEKLLEWLGISPSTISVKGKNALKVATVFACIKILSESVSKLPLKIYQEDEYGIQR 80 (429) Q Consensus 1 Mg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~~~~ 80 (429) ||||+++|+..+.. .. ..+. .....++.+.|+++++|++||++||+++|++|+++++++ . T Consensus 1 Mg~f~~l~~~~~~~--~~---~~~~----------~~~~~~~~~~~l~~~~v~~~i~~Ia~~ia~~p~~~~~~~-----~ 60 (376) T protein:vir:78 1 MGFFSELFKRNKEI--EW---MWDL----------DFLEDKTTKVYLKKMALNTCVKHIARTIAKSDFRLKNGE-----T 60 (376) T ss_pred CchhhhhhccCCcc--cc---ccch----------hhccccchhhhhhhHHHHHHHHHHHHhhcccceeecccc-----c Confidence 99999998742211 11 1111 112246778899999999999999999999999999754 2 Q ss_pred eecchhhhhhcccCcCCCCHHHHHHHHHHHHHhhCCeEEEEeeCCCCceEEEEeeCCcceEEEEcCCcceeeeeeEEEee Q lcl|Aclame:pro 81 GTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVYIDDVGLLNSKTKMWYVV 160 (429) Q Consensus 81 ~~~~~~~~~l~~~PN~~~s~~~~~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~l~p~~v~~~~~~~~~~~~~~~~~~~~ 160 (429) ...|+++++|+.+||++||+++||+.++.++++.||+|+++.++..|.+.++|++.+..+...... .+.. T Consensus 61 ~~~~~l~~ll~~~PN~~~t~~~f~~~~~~~lll~Gn~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~----------~~~~ 130 (376) T protein:vir:78 61 SVRDKLYYKLNIRPNTDMSSSSFWEKVIYKLIYDNECLIVLSDTDDFLIADSYVRKEFAFFPDVFE----------GVTV 130 (376) T ss_pred cccchHHHHHhhccccCCCHHHHHHHHHHHHhHcCcEEEEEEeCCCeeeccceeecccceeeeeee----------eeee Confidence 446999999999999999999999999999999999999999999999999999998766432211 1111 Q ss_pred cccCceEEEccceEEEeecCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHHccCCcceEEEeCCCCCHHHHHHHHHH Q lcl|Aclame:pro 161 NTGGQQRVLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGDLNEDAKKVFREN 240 (429) Q Consensus 161 ~~~g~~~~~~~~evih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~~e~~~~~~~~ 240 (429) ...+..+.|+++||+||+++.......+.++...+...+... .....+.++.++.++++.+..+++++.+++++. T Consensus 131 ~~~~~~~~~~~~evih~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~ 205 (376) T protein:vir:78 131 KDYRYNRNFSMDDVIFLEYGNERLSAFTDGMFEDYGELFGKM-----IRAQMRNFQIRGAVNFKMAGVADKDKQTKLQEY 205 (376) T ss_pred ecceeeeeeccccEEEeccCCCCchhhhhHHHHHHHHHHHHH-----HHHHHhcCCCceeEEEccCCCCCHHHHHHHHHH Confidence 112234679999999999765543333333434333322211 122233445555555666778899999999999 Q ss_pred HHHHhcccc-cccceeecCCCceeEecCCChhHH-----HHHHHHHHHHHHHHHHhcCChhhcCCccccccccHHHHHHH Q lcl|Aclame:pro 241 FESMSSGLQ-NSHRIALMPVGYQFQPISLNMSDA-----QFLENTELTIRQIATAFGIKMHQLNDLSKATLNNIEQQQQQ 314 (429) Q Consensus 241 ~~~~~~g~~-~~~~~~vl~~g~~~~~~~~~~~d~-----~~~e~~~~~~~~Ia~~fgvp~~~l~~~~~~~~~n~~~~~~~ 314 (429) |++.++|.. +.++++++++|++|++++++|.++ ||+|.+++++++||++|||||.+|++ +++|.+++.++ T Consensus 206 ~~~~~~g~~~~~~~v~~l~~g~~~~~l~~~~~~~~~~~~q~~e~~~~~~~~Ia~~fgVPp~~l~~----~~s~~e~~~~~ 281 (376) T protein:vir:78 206 IDKVYASFNNNEIAIVPQLEGFNYEEFGTTSVNNSQSFDEVKKLRKEMIDYVASILGIPSSLLHG----DMADLSNNMKA 281 (376) T ss_pred HHHHhccccccCcceEEcCCCceEEeeccCccccchhHHHHHHHHHHHHHHHHHHhCCCHHHhCC----CCCCHHHHHHH Confidence 999999864 455688899999999999988664 99999999999999999999999973 68999999999 Q ss_pred HHHHHHhHHHHHHHHHHHHhhccchhhcchhhhhhhhhhHhhhhHHHHHHHHHHHHhCCCCCHHHHHHHhCCCCCCCc-- Q lcl|Aclame:pro 315 FYTDTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEAGG-- 392 (429) Q Consensus 315 ~~~~~l~P~~~~i~~~l~~~ll~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~Gl~~~~~g-- 392 (429) |+++||.|++++||++|++++|++.+ ++++|+++.+++.|.+++++++.+++++|++|+||+|+++|+||+|+| T Consensus 282 f~~~~l~P~~~~ie~~l~~kll~~~~----~~~~~~~~~ll~~d~~~~~~~~~~~~~~G~~t~NE~R~~lg~~p~~~g~~ 357 (376) T protein:vir:78 282 YMEYCIDPLTKKLEDELNAKLFTFSE----FLAGEHIKIIHKKDIIENAEAVDKLVASGSFNRNEVRELLGAERVDNPEL 357 (376) T ss_pred HHHHHHHHHHHHHHHHHHhhhCCccc----ceecccchhhcccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCC Confidence 99999999999999999999998754 467788888999999999999999999999999999999999999875 Q ss_pred ceeeeccccccccccccccCCCCCCCC Q lcl|Aclame:pro 393 DRLLVNGNMLPIDMAGQAYLKGGDTNG 419 (429) Q Consensus 393 D~~~~~~n~~~~~~~~~~~~~~g~~~~ 419 (429) |++++|+|++|++..+ +++ T Consensus 358 d~~~~~~n~~~~~~~~--------e~g 376 (376) T protein:vir:78 358 DKYLITKNYQSADEGG--------EDG 376 (376) T ss_pred ceeeeccCceehhccc--------cCC Confidence 9999999999987432 111 No 73 >protein:vir:94002 Length: 378 # NCBI annotation: putative portal protein # Family: family:all:2379 # MgeID: mge:1487 # MgeName: jj50 # Cross-refs: genbank:acc:YP_764318;genbank:gi:115315632;genbank:GeneID:5176589 Probab=100.00 E-value=7.2e-78 Score=443.50 Aligned_cols=361 Identities=16% Similarity=0.191 Sum_probs=287.5 Q ss_pred CchhhhhhcccccccccccccCCchHHHHHhhcCCCCcceechhhhhccHHHHHHHHHHHHhhccCceEEEecCCcee-- Q lcl|Aclame:pro 1 MDSVKKFFNFEKRQTSQVIELNKDDEKLLEWLGISPSTISVKGKNALKVATVFACIKILSESVSKLPLKIYQEDEYGI-- 78 (429) Q Consensus 1 Mg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~~-- 78 (429) ||||++++++.+....... ..+..+ .....++++++|++||++||++||++|+++++.++++. T Consensus 1 Mg~f~~~~~~~~~~~~~~~------~~~~~~---------~~~~~~~~~~~v~~~v~~IA~~iA~lp~~~~~~~~~~~~~ 65 (378) T protein:vir:94 1 MNLFGKVVSFSRGKLNNDT------QRVTAW---------QNEAVEYTSAFVTNIHNKIANEITKVEFNHVKYKKSDVGS 65 (378) T ss_pred CCccccchhcccccccCCc------ceeeee---------ccchhHHHHHHHHHHHHHHHhhhhhCceeeEEEcccCccc Confidence 9999998765443221111 001111 11234568899999999999999999999887765442 Q ss_pred ---eeeecchhhhhhcccCcCCCCHHHHHHHHHHHHHhhCCeEEEEeeCC-CCceEEEEeeCCcceEEEEcCCcceeeee Q lcl|Aclame:pro 79 ---QRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDR-KGKVQALWPIDASKVTVYIDDVGLLNSKT 154 (429) Q Consensus 79 ---~~~~~~~~~~~l~~~PN~~~s~~~~~~~~~~~~l~~G~~~~~~~~~~-~g~~~~l~~l~p~~v~~~~~~~~~~~~~~ 154 (429) .....|+++++|+.+||++|++++||+.++.+++++||+|++++++. .|.+..++|. T Consensus 66 ~~~~~~~~~~l~~lL~~~PN~~~t~~~f~~~~~~~lll~Gna~i~~~~~~~~g~~~~l~p~------------------- 126 (378) T protein:vir:94 66 DTLISMAGSDLDEVLNWSPKGERNSMDFWRKVIKKLLSAPYVDLYAVFDDNTGELLDLLFA------------------- 126 (378) T ss_pred ccccccccchHHHHHhhcCCCCCCHHHHHHHHHHHHhhcCceEEEEEeeCCCceEEEEEec------------------- Confidence 23457999999999999999999999999999999999999876653 4555544431 Q ss_pred eEEEeecccCceEEEccceEEEeecCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHHccCCcceEEEeCCCCCHHHH Q lcl|Aclame:pro 155 KMWYVVNTGGQQRVLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGDLNEDAK 234 (429) Q Consensus 155 ~~~~~~~~~g~~~~~~~~evih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~~e~~ 234 (429) +..+.|+++|||||+++ .+...|.||++.+.+.+... +. ++.++|+++++..+++++. T Consensus 127 ---------~~~~~~~~~diiH~~~~--~~~~~g~s~l~~~~~~i~~~----------~~-~~~~~gil~~~~~l~~~~~ 184 (378) T protein:vir:94 127 ---------DDKKEYKPEELVRLTSP--FYINEDTSILDNALASIQTK----------LE-QGKLRGLLKINAFLDIDNT 184 (378) T ss_pred ---------CCeeEeeeeeeEEecCc--CCccchhHHHHHHHHHHHHH----------Hh-cccccceeeeCCcCCHHHH Confidence 11245788999999954 56678999999988876532 23 3568999999999998888 Q ss_pred HHHHHHHHHHhc---ccccccceeecCCCceeEecCCChhHHHHHHHHHHHHHHHHHHhcCChhhcCCccccccccHHHH Q lcl|Aclame:pro 235 KVFRENFESMSS---GLQNSHRIALMPVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKATLNNIEQQ 311 (429) Q Consensus 235 ~~~~~~~~~~~~---g~~~~~~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~fgvp~~~l~~~~~~~~~n~~~~ 311 (429) ++++++|.+.+. +..++|+++++++|++|+++++++.++++ +.++++.++||++|||||.+|++ ++.+++ T Consensus 185 ~~~~~~~~~~~~~~~~~~~~g~~~vl~~g~~~~~l~~~~~~~~~-~~~~~~~~~Ia~~fgVP~~~l~~------~~se~~ 257 (378) T protein:vir:94 185 QEYREKALTTIKNMQEGSSYNGLTPVDNKTEIVELKKDYSVLNK-DEIDLIKSELLTGYFMNENILLG------TASQEQ 257 (378) T ss_pred HHHHHHHHHHHHHhhcccccccceecCCCceEEEccCChhhhhH-HHHHHHHHHHHHHhCCCHHHhcC------ChHHHH Confidence 777777766653 23578899999999999999999999996 67799999999999999999953 345789 Q ss_pred HHHHHHHHHhHHHHHHHHHHHHhhccchhhcchh------hhhhhhhhHhhhhHHHHHHHHHHHHhCCCCCHHHHHHHhC Q lcl|Aclame:pro 312 QQQFYTDTLQATLTMYEQEMTYKLFLDSELDKGF------YSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKED 385 (429) Q Consensus 312 ~~~~~~~~l~P~~~~i~~~l~~~ll~~~~~~~~~------~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~G 385 (429) ..+|+++||.|++++||++|+++||++.++..++ .++||++.+++.|.+++++.+.+++++|++|+||+|+++| T Consensus 258 ~~~f~~~tL~P~~~~ie~~l~~~Ll~~~er~~g~~~~~~~~~~f~~~~l~~~d~~~~~~~~~~~~~~G~~T~NE~R~~~g 337 (378) T protein:vir:94 258 QIYFYNSTIIPLLIQLEKELTYKLISTNRRRVVKGNLYYERIIVDNQLFKFATLKELIDLYHENINGPIFTQNQLLVKMG 337 (378) T ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCChhHhhhhhhcccccceeecchhhhhcCHHHHHHHHHHHHhCCCcCHHHHHHHhC Confidence 9999999999999999999999999988776654 3789999999999999999999999999999999999999 Q ss_pred CCCCCCcceeeeccccccccccccccCCCCCCCCCCCCCCCCCC Q lcl|Aclame:pro 386 LPPEAGGDRLLVNGNMLPIDMAGQAYLKGGDTNGEVSKEGNEGN 429 (429) Q Consensus 386 l~~~~~gD~~~~~~n~~~~~~~~~~~~~~g~~~~~~~~~~~~~n 429 (429) +||+||||++++|+|++|++..++.+.. .+..++++|+| T Consensus 338 l~p~~gGD~~~~~~n~~~~~~~~~~~~~-----~~~~~~~~e~~ 376 (378) T protein:vir:94 338 EQPIEGGDVYIANLNAVAVKNLSDLQGS-----RKDVTSTDETN 376 (378) T ss_pred CCCCCCCCeeeecccccccccchhhcCC-----cCCCCCCCCCC Confidence 9999999999999999999876544321 22223334444 No 74 >protein:vir:93867 Length: 378 # NCBI annotation: putative portal protein # Family: family:all:2379 # MgeID: mge:1479 # MgeName: 712 # Cross-refs: genbank:acc:YP_764264;genbank:gi:115315577;genbank:GeneID:5141561 Probab=100.00 E-value=1e-77 Score=442.63 Aligned_cols=361 Identities=16% Similarity=0.187 Sum_probs=286.3 Q ss_pred CchhhhhhcccccccccccccCCchHHHHHhhcCCCCcceechhhhhccHHHHHHHHHHHHhhccCceEEEecCCcee-- Q lcl|Aclame:pro 1 MDSVKKFFNFEKRQTSQVIELNKDDEKLLEWLGISPSTISVKGKNALKVATVFACIKILSESVSKLPLKIYQEDEYGI-- 78 (429) Q Consensus 1 Mg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~~-- 78 (429) ||||++++++.+....... ..+..|. ....+++.++|++||++||++||++|+++++.++++. T Consensus 1 Mg~f~~~~~f~~~~~~~~~------~~~~~~~---------~~~~~~~~~~v~~~i~~Ia~~iA~lp~~~~~~~~~~~~~ 65 (378) T protein:vir:93 1 MNLFGKVVSFSRGKLNNDT------QRVTAWQ---------NEAVEYTSAFVTNIHNKIANEITKVEFNHVKYKKSDVGS 65 (378) T ss_pred CccchhhhhhhccccCCCc------ceeeecc---------cchhHHHHHHHHHHHHHHHhhhhhCceeeEEEccccccc Confidence 9999998764332211110 0011111 1234678889999999999999999999998766543 Q ss_pred ---eeeecchhhhhhcccCcCCCCHHHHHHHHHHHHHhhCCeEEEEeeCCC-CceEEEEeeCCcceEEEEcCCcceeeee Q lcl|Aclame:pro 79 ---QRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRK-GKVQALWPIDASKVTVYIDDVGLLNSKT 154 (429) Q Consensus 79 ---~~~~~~~~~~~l~~~PN~~~s~~~~~~~~~~~~l~~G~~~~~~~~~~~-g~~~~l~~l~p~~v~~~~~~~~~~~~~~ 154 (429) .....|+++++|+.+||++||+++||+.++.+++++||+|++++++.. |++..++|. T Consensus 66 ~~~~~~~~~~l~~lL~~~PN~~~t~~~f~~~~~~~lll~Gn~~i~~~~~~~~g~~~~l~~~------------------- 126 (378) T protein:vir:93 66 DTLISMAGSDLDEVLNWSPKGERNSMDFWRKVIKKLLRAPYVDLYAVFDDNTGELLDLLFA------------------- 126 (378) T ss_pred ccccccccchHHHHHhhcCCCCCCHHHHHHHHHHHHhhcCceEEEEEeecCCceEEEEEec------------------- Confidence 234569999999999999999999999999999999999999877633 444333321 Q ss_pred eEEEeecccCceEEEccceEEEeecCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHHccCCcceEEEeCCCCCHHHH Q lcl|Aclame:pro 155 KMWYVVNTGGQQRVLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGDLNEDAK 234 (429) Q Consensus 155 ~~~~~~~~~g~~~~~~~~evih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~~e~~ 234 (429) +..++|+++||||+|. +.+...|.||+..+...+. ..+.+ +.++|+++++..+++++. T Consensus 127 ---------~~~~~~~~~diih~r~--~~~~~~~~s~l~~~~~~i~----------~~~~~-~~~~g~l~~~~~l~~~~~ 184 (378) T protein:vir:93 127 ---------DDKKEYKTEELVRLTS--PFYINEDTSILDNALASIQ----------TKLEQ-GKLRGLLKINAFLDIDNT 184 (378) T ss_pred ---------CCeeEeccceeEEecC--ccccchhhHHHHHHHHHHH----------HHHhc-CcccceeeeCCcCCHHHH Confidence 1234678999999995 4566779999988776553 23444 468999999999998888 Q ss_pred HHHHHHHHHHhc---ccccccceeecCCCceeEecCCChhHHHHHHHHHHHHHHHHHHhcCChhhcCCccccccccHHHH Q lcl|Aclame:pro 235 KVFRENFESMSS---GLQNSHRIALMPVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKATLNNIEQQ 311 (429) Q Consensus 235 ~~~~~~~~~~~~---g~~~~~~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~fgvp~~~l~~~~~~~~~n~~~~ 311 (429) ++++++|++.++ +..++++++++++|++|++++.++.++++ +.++++.++||++|||||.+|++ ++.+++ T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~l~~~~~~~~~-~~~~~~~~~Ia~~fgVPp~~l~g------~~~e~~ 257 (378) T protein:vir:93 185 QEYREKALTTIKNMQEGSSYNGLTPVDNKTEIVELKKDYSVLNK-DEIDLIKSELLTGYFMNENILLG------TATQEQ 257 (378) T ss_pred HHHHHHHHHHHHHhhcccccccceEcCCCceEEEccCChhhhhH-HHHHHHHHHHHHHhCCCHHHhcC------CcHHHH Confidence 777777776653 33578899999999999999999999996 77889999999999999999853 456899 Q ss_pred HHHHHHHHHhHHHHHHHHHHHHhhccchhhcchh------hhhhhhhhHhhhhHHHHHHHHHHHHhCCCCCHHHHHHHhC Q lcl|Aclame:pro 312 QQQFYTDTLQATLTMYEQEMTYKLFLDSELDKGF------YSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKED 385 (429) Q Consensus 312 ~~~~~~~~l~P~~~~i~~~l~~~ll~~~~~~~~~------~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~G 385 (429) ..+|++.+|.|++++||++|+++||++.++..++ +++||++.+++.|.+++++++.+++++|++|+||+|+++| T Consensus 258 ~~~f~~~tl~P~~~~ie~~l~~kLl~~~er~~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~G~~t~NE~R~~~g 337 (378) T protein:vir:93 258 QIYFYNSTIIPLLIQLEKELTYKLISTNRRRVVKGNLYYERIIVDNQLFKFATLKELIDLYHENINGPIFTQNQLLVKMG 337 (378) T ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCChhHhhhhhhcccccceeeccchhhhcCHHHHHHHHHHHHhCCCcCHHHHHHHhC Confidence 9999999999999999999999999998776664 4889999999999999999999999999999999999999 Q ss_pred CCCCCCcceeeeccccccccccccccCCCCCCCCCCCCCCCCCC Q lcl|Aclame:pro 386 LPPEAGGDRLLVNGNMLPIDMAGQAYLKGGDTNGEVSKEGNEGN 429 (429) Q Consensus 386 l~~~~~gD~~~~~~n~~~~~~~~~~~~~~g~~~~~~~~~~~~~n 429 (429) +||+||||++++|+|++|++..++..... +.+.+++|+| T Consensus 338 l~p~~ggD~~~~~~n~~~~~~~~~~~~~~-----~~~~~~~e~~ 376 (378) T protein:vir:93 338 EQPIEGGDVYIANLNAVAVKNLSDLQGSR-----KDVTSTDETN 376 (378) T ss_pred CCCCCCCCeeeeccccccccchhhhcCcc-----CCCCCCCCCC Confidence 99999999999999999998776543321 1122233333 No 75 >protein:vir:1661 Length: 378 # NCBI annotation: unknown # Family: family:all:2379 # MgeID: mge:34 # MgeName: sk1 # Cross-refs: genbank:acc:NP_044950;genbank:gi:9629657;genbank:GeneID:1261302 Probab=100.00 E-value=1.8e-77 Score=441.30 Aligned_cols=361 Identities=16% Similarity=0.191 Sum_probs=286.3 Q ss_pred CchhhhhhcccccccccccccCCchHHHHHhhcCCCCcceechhhhhccHHHHHHHHHHHHhhccCceEEEecCCceee- Q lcl|Aclame:pro 1 MDSVKKFFNFEKRQTSQVIELNKDDEKLLEWLGISPSTISVKGKNALKVATVFACIKILSESVSKLPLKIYQEDEYGIQ- 79 (429) Q Consensus 1 Mg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~~~- 79 (429) ||||++++++.+....... ..+..|. ....+++.++|++||++||++||++||++++.++++.. T Consensus 1 Mg~f~~~~~~~~~~~~~~~------~~~~~~~---------~~~~~~~~~~v~~~i~~Ia~~iA~l~~~~~~~~~~~~~~ 65 (378) T protein:vir:16 1 MNLFGKVVSFSRGKLNNDT------QRVTAWQ---------NEAVEYTSAFVTNIHNKIANEITKVEFNHVKYKKSDVGS 65 (378) T ss_pred CccchhhhhhhcccccCCc------ceeeecc---------cchhhHHHHHHHHHHHHHHhhhhhCceeEEEEccccccc Confidence 9999998764333221111 0011111 22346788999999999999999999999987665432 Q ss_pred ----eeecchhhhhhcccCcCCCCHHHHHHHHHHHHHhhCCeEEEEeeCCC-CceEEEEeeCCcceEEEEcCCcceeeee Q lcl|Aclame:pro 80 ----RGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRK-GKVQALWPIDASKVTVYIDDVGLLNSKT 154 (429) Q Consensus 80 ----~~~~~~~~~~l~~~PN~~~s~~~~~~~~~~~~l~~G~~~~~~~~~~~-g~~~~l~~l~p~~v~~~~~~~~~~~~~~ 154 (429) ....|+++++|+.+||++|++++||+.++.+++++||+|++++++.. |.+..++| . T Consensus 66 ~~~~~~~~~~l~~lL~~~PN~~~t~~~f~~~~~~~lll~Gna~i~~~~d~~~g~~~~l~~---~---------------- 126 (378) T protein:vir:16 66 DTLISMAGSDLDEVLNWSPKGERNSMDFWRKVIKKLLRAPYVDLYAVFDDNTGELLDLLF---A---------------- 126 (378) T ss_pred ccccccccchHHHHHhhcCCCCCCHHHHHHHHHHHHhhcCceEEEEEeecCCceEEEEEe---c---------------- Confidence 33569999999999999999999999999999999999999988643 44433322 1 Q ss_pred eEEEeecccCceEEEccceEEEeecCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHHccCCcceEEEeCCCCCHHHH Q lcl|Aclame:pro 155 KMWYVVNTGGQQRVLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGDLNEDAK 234 (429) Q Consensus 155 ~~~~~~~~~g~~~~~~~~evih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~~e~~ 234 (429) +..+.|+++||||||.+ .+...|.||+..+...+.. .+. ++.++|+++.+..+++++. T Consensus 127 ---------~~~~~~~~~diih~r~~--~~~~~~~s~l~~~~~~i~~----------~~~-~~~~~g~l~~~~~l~~~~~ 184 (378) T protein:vir:16 127 ---------DDKKEYKPEELVRLTSP--FYINEDTSILDNALASIQT----------KLE-QGKLRGLLKINAFLDIDNT 184 (378) T ss_pred ---------CCeeEecccceEEecCc--cCccchhHHHHHHHHHHHH----------HHh-cCccceeeEeCCcCCHHHH Confidence 12345788999999954 5566789999888766532 233 4578999999999999887 Q ss_pred HHHHHHHHHHhc---ccccccceeecCCCceeEecCCChhHHHHHHHHHHHHHHHHHHhcCChhhcCCccccccccHHHH Q lcl|Aclame:pro 235 KVFRENFESMSS---GLQNSHRIALMPVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKATLNNIEQQ 311 (429) Q Consensus 235 ~~~~~~~~~~~~---g~~~~~~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~fgvp~~~l~~~~~~~~~n~~~~ 311 (429) ++.+++|++.+. +..++|+++++++|++|+++++++.++++ +.+++.+++||++|||||.+|++ ++.+++ T Consensus 185 ~~~~~~~~~~~~~~~~~~~~g~~~vl~~g~~~~~l~~~~~~~~~-~~~~~~~~~Ia~~fgVPp~~l~g------~~~e~~ 257 (378) T protein:vir:16 185 QEYREKALTTIKNMQEGSSYNGLTPVDNKTEIVELKKDYSVLNK-DEIDLIKSELLTGYFMNENILLG------TASQEQ 257 (378) T ss_pred HHHHHHHHHHHHHhhcccccccceEcCCCceEEEccCChhhhhH-HHHHHHHHHHHHHhCCCHHHhcC------CchHHH Confidence 777777776653 33578999999999999999999999997 56789999999999999999953 456899 Q ss_pred HHHHHHHHHhHHHHHHHHHHHHhhccchhhcchh------hhhhhhhhHhhhhHHHHHHHHHHHHhCCCCCHHHHHHHhC Q lcl|Aclame:pro 312 QQQFYTDTLQATLTMYEQEMTYKLFLDSELDKGF------YSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKED 385 (429) Q Consensus 312 ~~~~~~~~l~P~~~~i~~~l~~~ll~~~~~~~~~------~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~G 385 (429) ..+|+++||.|++++|+++|+++||++.++..++ .++||++.+++.|.+++++.+.+++++|++|+||+|+++| T Consensus 258 ~~~f~~~tl~P~~~~ie~~l~~kLl~~~e~~~~~~~~~~~~~~f~~~~l~~~d~~~~~~~~~~~~~~G~~T~NE~R~~~g 337 (378) T protein:vir:16 258 QIYFYNSTIIPLLIQLEKELTYKLISTNRRRVVKGNLYYERIIVDNQLFKFATLKELIDLYHENINGPIFTQNQLLVKMG 337 (378) T ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCChhhhhhhhhcccccceeeccchhhhcCHHHHHHHHHHHHhCCCcCHHHHHHHhC Confidence 9999999999999999999999999988766654 4789999999999999999999999999999999999999 Q ss_pred CCCCCCcceeeeccccccccccccccCCCCCCCCCCCCCCCCCC Q lcl|Aclame:pro 386 LPPEAGGDRLLVNGNMLPIDMAGQAYLKGGDTNGEVSKEGNEGN 429 (429) Q Consensus 386 l~~~~~gD~~~~~~n~~~~~~~~~~~~~~g~~~~~~~~~~~~~n 429 (429) +||+||||++++|+|++|++..++... ..+...+++|+| T Consensus 338 ~~p~~ggD~~~~~~n~~~~~~~~~~~~-----~~~~~~~~~e~~ 376 (378) T protein:vir:16 338 EQPIEGGDVYIANLNAVAVKNLSDLQG-----SRKDVTSTDETN 376 (378) T ss_pred CCCCCCCCeEeeccccccccchhhhcC-----ccCCCCCCCCCC Confidence 999999999999999999987654332 122223344444 No 76 >protein:vir:4828 Length: 382 # NCBI annotation: ORF24 # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:105 # MgeName: 7201 # Cross-refs: genbank:acc:NP_038325;genbank:gi:9634651;genbank:GeneID:1262630 Probab=100.00 E-value=2e-76 Score=435.56 Aligned_cols=374 Identities=17% Similarity=0.204 Sum_probs=301.8 Q ss_pred CchhhhhhcccccccccccccCCchHHHHHhhcCCCCcceechhhhhccHHHHHHHHHHHHhhccCceEEEecCCceeee Q lcl|Aclame:pro 1 MDSVKKFFNFEKRQTSQVIELNKDDEKLLEWLGISPSTISVKGKNALKVATVFACIKILSESVSKLPLKIYQEDEYGIQR 80 (429) Q Consensus 1 Mg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~~~~ 80 (429) ||||+++++............ .. ..+++.+.+...++...++++++|++||++||+.||++||++++... T Consensus 1 Mg~f~~~~~~~~~~~~~~~~~--~~---~~~~~~~~~~~~v~~~~~l~~~~v~~~i~~ia~~ia~~~~~~~~~~~----- 70 (382) T protein:vir:48 1 MPIFNLATESPPDNQGGFFDV--VD---SDFLASLKGNEWVSAETALRNSDLFSIINQLSNDLATVKLITSRKKL----- 70 (382) T ss_pred CccccccccCCcccccccccc--hh---hhccccccCCcccchHhhhccHHHHHHHHHHHHhhccCceeeecchh----- Confidence 999998765332222111111 11 12344556677889999999999999999999999999999997543 Q ss_pred eecchhhhhhcccCcCCCCHHHHHHHHHHHHHhhCCeEEEEeeCCCCceEEEEeeCCcceEEEEcCCcceeeeeeEEEee Q lcl|Aclame:pro 81 GTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVYIDDVGLLNSKTKMWYVV 160 (429) Q Consensus 81 ~~~~~~~~~l~~~PN~~~s~~~~~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~l~p~~v~~~~~~~~~~~~~~~~~~~~ 160 (429) ..|+.+||++||+++||+.++.+|+++||||++++++..|++.+|||++|++|++..+.++... .|... T Consensus 71 -------~~L~~~PN~~~t~~~f~~~l~~~l~l~Gna~~~i~rd~~G~~~~l~~i~~~~v~v~~~~~~~~~----~y~~~ 139 (382) T protein:vir:48 71 -------QGIVDNPSNNANRFNFYQSIFAQMLLGGEAFAYRWRNENGRDMKWEYLRPSQVSFNRLDNKDGI----YYNIT 139 (382) T ss_pred -------hhhhhhcCCCCCHHHHHHHHHHHhhhcCCEEEEEEECCCCcEEEEEEEcCceeEEEEcCCCCeE----EEEEE Confidence 3467899999999999999999999999999999999999999999999999999887653221 11111 Q ss_pred c---ccCceEEEccceEEEeecCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHHccCCcceEEEeCCCCCHHHHHHH Q lcl|Aclame:pro 161 N---TGGQQRVLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGDLNEDAKKVF 237 (429) Q Consensus 161 ~---~~g~~~~~~~~evih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~~e~~~~~ 237 (429) . ..+..+.|+++|||||+++++.+..+|+||+.++..++....++.++..++|+||+.|+|++++++.+++++.+++ T Consensus 140 ~~~~~~~~~~~~~~~evih~~~~~~~~~~~G~s~l~~~~~~i~~~~~~~~~~~~~~~ng~~p~~il~~~~~~~~e~~~~~ 219 (382) T protein:vir:48 140 FDDPRIPPKQHVPQNDVLHFRLLSVDGGMTSVSPLMALSRELDIQKASGNLTINSLKNALNANGILKIKGGGLLDFKTKL 219 (382) T ss_pred ecCccccceeEEcCccEEEecCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEeCCCCChHHHHHH Confidence 1 2245678999999999998888889999999999999999999999999999999999999999999999999999 Q ss_pred HHHHHHHhcccccccceeecCCCceeEecCCChhHHHHHHHHHHHHHHHHHHhcCChhhcCCccccccccHHHHHHHHHH Q lcl|Aclame:pro 238 RENFESMSSGLQNSHRIALMPVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKATLNNIEQQQQQFYT 317 (429) Q Consensus 238 ~~~~~~~~~g~~~~~~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~fgvp~~~l~~~~~~~~~n~~~~~~~~~~ 317 (429) ++.|.+. ..++|+++|+++|++|++++.++.|+|++|.+++.+++||++|||||.+||..+. +++.+++.+.|++ T Consensus 220 ~~~~~~~---~~n~g~~~vl~~g~~~~~l~~~~~d~q~~e~~~~~~~~Ia~afgVp~~~lg~~~~--~~~~~~~~~~~~~ 294 (382) T protein:vir:48 220 SRSRQAM---KQMQGGPLVLDDLEDFTPLEIKSNVSQLLKQADWTTGQFAKVYGIPDNVVGGQGD--QQSSLEMSSDLYS 294 (382) T ss_pred HHHHHhh---ccCCCCeeEcCCCceEEEccCChhHHHHHHHHHHHHHHHHHHhCCCHHHhCCCCC--cccHHHHHHHHHH Confidence 8888764 3578999999999999999999999999999999999999999999999987543 4567888999999 Q ss_pred HHHhHHHHHHHHHHHHhhccchhhcchhhhhhhhhhHhhhhHHHHHHHHHHHHhCCCCCHHHHHHHhCCCC-----CCCc Q lcl|Aclame:pro 318 DTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPP-----EAGG 392 (429) Q Consensus 318 ~~l~P~~~~i~~~l~~~ll~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~Gl~~-----~~~g 392 (429) .+|.|+++.|+++|+++++++.+... ...++ .+.........+++.+|++|+||+|+.++... ++++ T Consensus 295 ~~l~p~~~~i~~~l~~~l~~~~~~~~--~~~~~------~~~~~~~~~~~~l~~~g~~t~~e~r~~l~~~g~~~~~~~~~ 366 (382) T protein:vir:48 295 KAVSRYLRPFLSELSQKLSCDVDADI--FPAVD------PTGSNYISRINSLVKTGTLAQNQGLYILQQAEILPKELPNG 366 (382) T ss_pred HHHHHHHHHHHHHHHHHhcChhhhhh--hhhhc------cchhHHHHHHHHHhhcCccCHHHHHHHHhhCCCCCcchhhh Confidence 99999999999999999987654322 22232 23334445567889999999999999875333 2233 Q ss_pred ceeeeccccccccccccccCCCCCCCCCC Q lcl|Aclame:pro 393 DRLLVNGNMLPIDMAGQAYLKGGDTNGEV 421 (429) Q Consensus 393 D~~~~~~n~~~~~~~~~~~~~~g~~~~~~ 421 (429) +. ..+..+||++++++ T Consensus 367 ~~-------------~~~~~~GGd~~~~~ 382 (382) T protein:vir:48 367 EN-------------PNSTLKGGEEDGQD 382 (382) T ss_pred hc-------------CCCCCCCCCCCCCC Confidence 22 12335777776665 No 77 >protein:vir:4952 Length: 386 # NCBI annotation: portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:108 # MgeName: Sfi19 # Cross-refs: genbank:acc:NP_049928;genbank:gi:9632899;genbank:GeneID:1262075 Probab=100.00 E-value=1.8e-76 Score=435.81 Aligned_cols=384 Identities=18% Similarity=0.166 Sum_probs=310.3 Q ss_pred CchhhhhhcccccccccccccCCchHHHH--HhhcCCCCcceechhhhhccHHHHHHHHHHHHhhccCceEEEecCCcee Q lcl|Aclame:pro 1 MDSVKKFFNFEKRQTSQVIELNKDDEKLL--EWLGISPSTISVKGKNALKVATVFACIKILSESVSKLPLKIYQEDEYGI 78 (429) Q Consensus 1 Mg~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~~ 78 (429) ||||+++++... +. ... ......+. .+++.+.+...++...|+++|+|++||++||++||++|+++++... T Consensus 1 M~~f~~~~~~~~--~~-~~~-~~~~~~~~~~~~~~~~~~~~~v~~~~al~~~~v~~~i~~ia~~ia~~p~~~~~~~~--- 73 (386) T protein:vir:49 1 MPIFNITNLATE--SP-PIN-QESFFDIADSDFLASLNSSEWVSAENALKNSDLFSIISQLSNDLATAKITTSRKQL--- 73 (386) T ss_pred CchhhhhccCCC--Cc-ccc-hhhhhhhhhccccccccCCceechhhhhccHHHHHHHHHHHHHhhhCceeeccchh--- Confidence 999988654211 11 111 11111111 1233445667789999999999999999999999999999987543 Q ss_pred eeeecchhhhhhcccCcCCCCHHHHHHHHHHHHHhhCCeEEEEeeCCCCceEEEEeeCCcceEEEEcCCcceeeeeeEEE Q lcl|Aclame:pro 79 QRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVYIDDVGLLNSKTKMWY 158 (429) Q Consensus 79 ~~~~~~~~~~~l~~~PN~~~s~~~~~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~l~p~~v~~~~~~~~~~~~~~~~~~ 158 (429) ..|+.+||++||+++||+.++.+++++||||++++++..|++.+|||++|++|++..+.+...... .... T Consensus 74 ---------~~l~~~PN~~~t~~~f~~~~~~~lll~Gna~~~i~r~~~g~~~~l~~i~~~~v~v~~~~~~~~~~y-~~~~ 143 (386) T protein:vir:49 74 ---------QGIVDNPSNNANRFNFYQSIFAQMLLGGEAFAYRWRNDNGRDMKWEYLRPSQVSFNRLDNQNGLYY-NITF 143 (386) T ss_pred ---------hhhhhccCCCCCHHHHHHHHHHHhhhcCCEEEEEEECCCCcEEEEEEecCceeEEEEcCCCceEEE-EEEE Confidence 236679999999999999999999999999999999999999999999999999998765322110 1111 Q ss_pred eecccCceEEEccceEEEeecCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHHccCCcceEEEeCCCCCHHHHHHHH Q lcl|Aclame:pro 159 VVNTGGQQRVLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGDLNEDAKKVFR 238 (429) Q Consensus 159 ~~~~~g~~~~~~~~evih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~~e~~~~~~ 238 (429) ....++..+.|+++|||||+.+++.+..+|+||+.++...+.+..++.+++.++|+||++|++++++++..++++.++++ T Consensus 144 ~~~~~~~~~~~~~~evih~~~~~~~~~~~G~s~l~~~~~~i~~~~~~~~~~~~~~~ng~~~~~il~~~~~~~~~~~~~~~ 223 (386) T protein:vir:49 144 DDPHIAPKQHVPQNDILHFRLLSVDGGLTSVSPLMALGREFNIQKASDKLTISALKNALNANGILKIKGGGLLDFKTKVS 223 (386) T ss_pred cCccccceeEEccccEEEecCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHHHccCCccEEEEeCCCCChHHHHHHH Confidence 11234667889999999999988888899999999999999999999999999999999999999999999999999999 Q ss_pred HHHHHHhcccccccceeecCCCceeEecCCChhHHHHHHHHHHHHHHHHHHhcCChhhcCCccccccccHHHHHHHHHHH Q lcl|Aclame:pro 239 ENFESMSSGLQNSHRIALMPVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKATLNNIEQQQQQFYTD 318 (429) Q Consensus 239 ~~~~~~~~g~~~~~~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~fgvp~~~l~~~~~~~~~n~~~~~~~~~~~ 318 (429) +.|... ..++|+++|+++|++|++++.+++|+|++|.+++++++||++|||||.+|++.. .++++.+ +.++++.. T Consensus 224 ~~~~~~---~~n~g~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgVPp~~lg~~~-~~~~~~~-~~~~~~~~ 298 (386) T protein:vir:49 224 RSRQAM---KQMQGGPLVLDDLEDFTPLEIKSNVAQLLSQADWTTGQFAKVYGIPESIVGGDG-DQQSSLE-MIYNIYFK 298 (386) T ss_pred HHHHHh---ccCCCCceecCCCceEEEccCChhHHHHHHHHHHHHHHHHHHhCCCHHHhCCCC-CccchHH-HHHHHHHH Confidence 888764 358899999999999999999999999999999999999999999999998643 4555555 45788999 Q ss_pred HHhHHHHHHHHHHHHhhccchhhcchhhhhhhhhhHhhhhHHHHHHHHHHHHhCCCCCHHHHHHHhCCCCCCCcceeeec Q lcl|Aclame:pro 319 TLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEAGGDRLLVN 398 (429) Q Consensus 319 ~l~P~~~~i~~~l~~~ll~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~Gl~~~~~gD~~~~~ 398 (429) +|.|+++.|+++|+++|+. +++||.+.+++.|...++..+.+++.+|++|+||+|++++..++...+. + T Consensus 299 ~i~~~l~~i~~~~~~~l~~--------~~~~~~~~~~~~d~~~~~~~~~~l~~~g~~t~nE~r~~l~~~~~~~~~~---~ 367 (386) T protein:vir:49 299 SVSRYLRPFVSEMSKKLSC--------EVDVDISPAVDPTGSNYISLINSMVKSGTLAQNQGLYILQQAEILPKEL---P 367 (386) T ss_pred HHHHHHHHHHHHHHHHhcc--------hhcccchhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHHhhCCCCCCcC---c Confidence 9999999999999998753 4789999999999999999999999999999999999998766532221 1 Q ss_pred cccccccccccccCCCCCCCCCC Q lcl|Aclame:pro 399 GNMLPIDMAGQAYLKGGDTNGEV 421 (429) Q Consensus 399 ~n~~~~~~~~~~~~~~g~~~~~~ 421 (429) .. ........+||+.++++ T Consensus 368 ~~----~~~~~~~~~gGd~~~~~ 386 (386) T protein:vir:49 368 DG----KNPNRTSLKGGEINEQD 386 (386) T ss_pred ch----hccCCCCCCCCCCCCCC Confidence 11 11112345677766554 No 78 >protein:vir:96579 Length: 576 # NCBI annotation: ORF012 # Family: family:all:2446 # MgeID: mge:1623 # MgeName: Twort # Cross-refs: genbank:acc:YP_238542;genbank:gi:66391267;genbank:GeneID:5130361 Probab=100.00 E-value=3.3e-76 Score=434.42 Aligned_cols=419 Identities=18% Similarity=0.200 Sum_probs=299.9 Q ss_pred Cch--hhhhhcccccc----ccc-ccccCCchHHHH-Hhhc-----CCCCccee--c----hhhhhccHHHHHHHHHHHH Q lcl|Aclame:pro 1 MDS--VKKFFNFEKRQ----TSQ-VIELNKDDEKLL-EWLG-----ISPSTISV--K----GKNALKVATVFACIKILSE 61 (429) Q Consensus 1 Mg~--~~~~~~~~~~~----~~~-~~~~~~~~~~~~-~~~~-----~~~~~~~~--~----~~~a~~~~~v~~~i~~ia~ 61 (429) |.. =.+|++...+. ++. .... .+...+. ..-| ..++.... + ......+|+|++||++||+ T Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-a~~~p~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~~~~npiv~~~I~~ia~ 105 (576) T protein:vir:96 27 IDDGLQANIRNIEEKSKELNKSLYGKQQ-AYAEPFLEVMDTNPEFRTKRSYMKNSDNLHDVLKQFGNNPILNAIILTRSN 105 (576) T ss_pred cccChhHHHHHhhhhhhhhccccCCccc-hhhcceeeeeecCCCccccCcchhhhhhhHHHHHHhhcCHHHHHHHHHHHH Confidence 211 11222211110 000 0000 0011110 0000 11111110 0 1223358999999999999 Q ss_pred hhcc-----------CceEEEecCCceeee----e----ecchhhhhhcccCcCC-CCHHHHHHHHHHHHHhhCCeEEEE Q lcl|Aclame:pro 62 SVSK-----------LPLKIYQEDEYGIQR----G----TKHYLNNLLRLRPNPY-MSSMNFFGSLEAQKNLYGNSYANI 121 (429) Q Consensus 62 ~ia~-----------~~~~~~~~~~~~~~~----~----~~~~~~~~l~~~PN~~-~s~~~~~~~~~~~~l~~G~~~~~~ 121 (429) .||+ +.|.+..++.++... . ..|.+.+++. .|||. +|+.+||+.++.+++++||+|+++ T Consensus 106 ~vA~~~~~~~~~~~~~~~~i~lk~~~~~~~~~~~~~~~~l~~~l~~~~~-~~~p~~~t~~~f~~~lv~dlll~Gna~~~i 184 (576) T protein:vir:96 106 QVAMYCQPSRYNERGLGFEVRMRDLDAEPGKKEKEEIKRIENFILNTGR-DKDIDRDSFQSFCRKIVRDTYTYDQVNFEK 184 (576) T ss_pred HHHhhhhhhhhccccccceeEEecCcCccchhhhHhhhhHHhhHhhccC-CCCCccccHHHHHHHHHHHHHhcCCeEEEE Confidence 9996 334443333322111 1 1233444443 45554 589999999999999999999998 Q ss_pred eeC--CCCceEEEEeeCCcceEEEEcCCcceeeeeeEEEeecccCceEEEccceEEEeecCCCCC---cccccCHHHHHH Q lcl|Aclame:pro 122 EFD--RKGKVQALWPIDASKVTVYIDDVGLLNSKTKMWYVVNTGGQQRVLKPEEILHFKNGITLD---GLVGVPTMEYLK 196 (429) Q Consensus 122 ~~~--~~g~~~~l~~l~p~~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~evih~~~~~~~~---~~~G~s~~~~~~ 196 (429) +++ ..|++.+||||+|++|++..+.++........++.+..++....|++++|||++++...+ +.+|+||+.++. T Consensus 185 ~~~rd~~g~~~~L~pl~p~~V~v~~~~dg~~~~~~~~~~~~~~~~~~~~~~~~dii~~~~~~~~d~~~~~~G~Spi~~a~ 264 (576) T protein:vir:96 185 VFNKKNATTMDKFIAVDPSTIFYATDKNGKIIKGGKRFVQVINKKVVASFTSREMAMGIRNPRTELSSSGYGLSEVEIAM 264 (576) T ss_pred EEecCCCCceEEEEEeCCceeEEEECCCCceeeeeeEEEEecCCceEEEecccceEEEeecCCCCcccCcccccHHHHHH Confidence 854 467899999999999999999887766666666667777778889999999877554433 678999999999 Q ss_pred HHHHHHHHHHHHHHHHHHccCCcceEEEeCC--CCCHHHHHHHHHHHHHHhcccccccce-eecCCCceeEecCCChhHH Q lcl|Aclame:pro 197 STLENSASADKFINNFYKQGLQVKGLVQYVG--DLNEDAKKVFRENFESMSSGLQNSHRI-ALMPVGYQFQPISLNMSDA 273 (429) Q Consensus 197 ~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~--~~~~e~~~~~~~~~~~~~~g~~~~~~~-~vl~~g~~~~~~~~~~~d~ 273 (429) ..+.+..++++++.++|+||++|+|+|+++. .+++++++++++.|++.++|..|+|++ +|+++|++|+++++++.|+ T Consensus 265 ~~i~~~~~~~~~~~~~f~Ng~~p~giL~~~~~~~ls~e~~~~lr~~~~~~~~G~~nag~~p~vl~~G~~~~~ls~~~~d~ 344 (576) T protein:vir:96 265 KQFIAYNNTETFNDRFFSHGGTTRGILQIKSEQQQSQRALENFKREWKSSFSGINGSWQVPVVMADDIKFVNMTPTANDM 344 (576) T ss_pred HHHHHHHHHHHHHHHHHhccCCCceEEEeCCCCCCCHHHHHHHHHHHHHHhccccccccceeecCCCceEEeccCChhhH Confidence 9999999999999999999999999999875 469999999999999999999999995 8999999999999999999 Q ss_pred HHHHHHHHHHHHHHHHhcCChhhcCCcccc-----------ccccHHHHHHHHHHHHHhHHHHHHHHHHHHhhccchhhc Q lcl|Aclame:pro 274 QFLENTELTIRQIATAFGIKMHQLNDLSKA-----------TLNNIEQQQQQFYTDTLQATLTMYEQEMTYKLFLDSELD 342 (429) Q Consensus 274 ~~~e~~~~~~~~Ia~~fgvp~~~l~~~~~~-----------~~~n~~~~~~~~~~~~l~P~~~~i~~~l~~~ll~~~~~~ 342 (429) +|+|.+++++++||++|||||.+||..+.+ +|+|++++.+.|++.||.|+++.||++|+++|++.. . T Consensus 345 qfle~~~~~~~~Ia~afgVPp~~lG~~~~~~~~g~~~~~s~t~sn~e~~~~~f~~~tL~P~~~~ie~~ln~~Ll~~~--~ 422 (576) T protein:vir:96 345 QFEKWLTYLINIISALYGIDPAEIGFPNRGGATGGKGGNTLNEADPGKKQQQSQNKGLQPLLRFIEDLINTHIISEY--S 422 (576) T ss_pred HHHHHHHHhHHHHHHHhCCCHHHccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHhhhchhc--c Confidence 999999999999999999999999875443 789999999999999999999999999999998653 2 Q ss_pred chhhhhhhhhhHhhhhHHHHHHHHHH--HHhCCCCCHHHHHHHhCCCCCCCcceeeeccccccccccccccC-------- Q lcl|Aclame:pro 343 KGFYSKFNVDAILRADIKTRYEAYRT--GIQGGFLKPNEARSKEDLPPEAGGDRLLVNGNMLPIDMAGQAYL-------- 412 (429) Q Consensus 343 ~~~~~~fd~~~l~~~d~~~~~~~~~~--~~~~g~~t~NE~R~~~Gl~~~~~gD~~~~~~n~~~~~~~~~~~~-------- 412 (429) ..++++| ++.|.+++++.+.. ++.+|+||+||+|+++||||+||||+++.|.++.+++....... T Consensus 423 ~~~~~~f-----~r~d~~~~~e~~~~~~~~~~G~lT~NE~R~~~gl~piegGD~~~~~~~~~~~~~~~~~~~~e~~~~~~ 497 (576) T protein:vir:96 423 DKYVFQF-----VGGDTKSELDKIKILQEEVKTYKTVNEARKEKGLKPIEGGDVLLDGSFIQSMSLNTQKEQYEDTKQKE 497 (576) T ss_pred CceEEEe-----ccCCHHHHHHHHHHHHHHhcCccCHHHHHHHhCCCCCCCcceeccccccccccccccCCCCCCccccc Confidence 3344444 45566666666554 45679999999999999999999999999988876653221100 Q ss_pred ---------CCCCCCCCCCCCCCCCC Q lcl|Aclame:pro 413 ---------KGGDTNGEVSKEGNEGN 429 (429) Q Consensus 413 ---------~~g~~~~~~~~~~~~~n 429 (429) ++++.... ..++.+++ T Consensus 498 ~~~~~~~~~~~~~~~~~-~~~s~~~~ 522 (576) T protein:vir:96 498 RFDMIQQFLNSPDDEEP-QQESTEDK 522 (576) T ss_pred cccccccccCCCCCCCC-CCCCCCCc Confidence 01110000 00011111 No 79 >protein:vir:99312 Length: 563 # NCBI annotation: putative portal protein # Family: family:all:2446 # MgeID: mge:1655 # MgeName: K # Cross-refs: genbank:acc:YP_024471;genbank:gi:48696430;genbank:GeneID:2948040 Probab=100.00 E-value=3e-76 Score=434.65 Aligned_cols=413 Identities=16% Similarity=0.188 Sum_probs=306.5 Q ss_pred CchhhhhhcccccccccccccCCchHHHHHhhc------CCCCcc--eec----hhhhhccHHHHHHHHHHHHhhcc--- Q lcl|Aclame:pro 1 MDSVKKFFNFEKRQTSQVIELNKDDEKLLEWLG------ISPSTI--SVK----GKNALKVATVFACIKILSESVSK--- 65 (429) Q Consensus 1 Mg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~--~~~----~~~a~~~~~v~~~i~~ia~~ia~--- 65 (429) +..+++..+...++-.++ +..... ..++.. ..+ .+.+-.+++|.+||+.+++.||. T Consensus 43 ~~~~~~~~~~~~~a~~~~---------~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~n~i~~~~I~t~~~~vA~~~~ 113 (563) T protein:vir:99 43 YQDLTKSLYGQQQAYAEP---------FIEMMDTNPEFRDKRSYMKNEHNLHDVLKKFGNNPILNAIILTRSNQVAMYCQ 113 (563) T ss_pred HHHHHhhhccCCCcchhh---------hHhhhcccccccccccCCCCcccHHHHHHHhhcchHHHHHHHHHHHHHHHHhh Confidence 455554433222221111 222111 111111 111 12233478899999999999885 Q ss_pred ----------CceEEEecCCceeee--eecchhhhhhc---ccCcCC-CCHHHHHHHHHHHHHhhCCeEEEEe--eCCCC Q lcl|Aclame:pro 66 ----------LPLKIYQEDEYGIQR--GTKHYLNNLLR---LRPNPY-MSSMNFFGSLEAQKNLYGNSYANIE--FDRKG 127 (429) Q Consensus 66 ----------~~~~~~~~~~~~~~~--~~~~~~~~~l~---~~PN~~-~s~~~~~~~~~~~~l~~G~~~~~~~--~~~~g 127 (429) ++++++..+.++... ...|++..+|. ..|++. +|+++|++.++.+++++||+|++++ ++..| T Consensus 114 ~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~p~~~t~~~f~~~lv~~lll~Gn~~~~~~~~rd~~G 193 (563) T protein:vir:99 114 PARYSEKGLGFEVRLRDLDAEPGRKEKEEMKRIEDFIVNTGKDKDVDRDSFQTFCKKIVRDTYIYDQVNFEKVFNKNNKT 193 (563) T ss_pred hhhhhcccccceeEEeecCCCcchhhhhhhHHHHHHhhhcCCCCCCCcchHHHHHHHHHHHHHhcCCeEEEEEEEecCCC Confidence 577777766544322 22345544432 123333 5889999999999999999999865 77789 Q ss_pred ceEEEEeeCCcceEEEEcCCcceeeeeeEEEeecccCceEEEccceEEEeecCCCCC---cccccCHHHHHHHHHHHHHH Q lcl|Aclame:pro 128 KVQALWPIDASKVTVYIDDVGLLNSKTKMWYVVNTGGQQRVLKPEEILHFKNGITLD---GLVGVPTMEYLKSTLENSAS 204 (429) Q Consensus 128 ~~~~l~~l~p~~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~evih~~~~~~~~---~~~G~s~~~~~~~~i~~~~~ 204 (429) ++.+||||+|++|++..+.++........++....++....|++++|||++.+...+ +.+|+||+.++...+.++.+ T Consensus 194 ~~~~L~pl~p~~V~v~~~~~g~~~~~~~~y~~~~~g~~~~~~~~~evI~~~~~~~~d~~~~~~G~Spi~~a~~~i~~~~~ 273 (563) T protein:vir:99 194 KLEKFIAVDPSTIFYATDKKGKIIKGGKRFVQVVDKRVVASFTSRELAMGIRNPRTELSSSGYGLSEVEIAMKEFIAYNN 273 (563) T ss_pred ceEEEEEeCCceeEEEECCCCceeccceeEEEEeCCceeEEecCcceEEEeccCCCCcccCcccchHHHHHHHHHHHHHH Confidence 999999999999999998887666555566666666777789999988776554333 67899999999999999999 Q ss_pred HHHHHHHHHHccCCcceEEEeCCC--CCHHHHHHHHHHHHHHhcccccccce-eecCCCceeEecCCChhHHHHHHHHHH Q lcl|Aclame:pro 205 ADKFINNFYKQGLQVKGLVQYVGD--LNEDAKKVFRENFESMSSGLQNSHRI-ALMPVGYQFQPISLNMSDAQFLENTEL 281 (429) Q Consensus 205 ~~~~~~~~~~ng~~~~~~~~~~~~--~~~e~~~~~~~~~~~~~~g~~~~~~~-~vl~~g~~~~~~~~~~~d~~~~e~~~~ 281 (429) +++++.++|+||++|+|+|+++.+ +++++.+++++.|++.++|..|+|++ +|+++|++|+++++++.|++|+|.+++ T Consensus 274 ~~~~~~~~f~ng~~p~giL~~~~~~~ls~e~~~~~~~~~~~~~~G~~nagk~~~vl~~G~~~~~l~~~~~d~qfle~~~~ 353 (563) T protein:vir:99 274 TESFNDRFFSHGGTTRGILQIRSDQQQSQHALENFKREWKSSLSGINGSWQIPVVMADDIKFVNMTPTANDMQFEKWLNY 353 (563) T ss_pred HHHHHHHHHHccCCCceEEEeCCCCCCCHHHHHHHHHHHHHHhccccccccceEEcCCCceEEeccCChhHHHHHHHHHH Confidence 999999999999999999998754 69999999999999999999999996 789999999999999999999999999 Q ss_pred HHHHHHHHhcCChhhcCCcccc-----------ccccHHHHHHHHHHHHHhHHHHHHHHHHHHhhccchhhcchhhhhhh Q lcl|Aclame:pro 282 TIRQIATAFGIKMHQLNDLSKA-----------TLNNIEQQQQQFYTDTLQATLTMYEQEMTYKLFLDSELDKGFYSKFN 350 (429) Q Consensus 282 ~~~~Ia~~fgvp~~~l~~~~~~-----------~~~n~~~~~~~~~~~~l~P~~~~i~~~l~~~ll~~~~~~~~~~~~fd 350 (429) .+++||++|||||.+||..+.+ +++|.+++.+.|++.||.|+++.||++|+++|++..+ .+++++| T Consensus 354 ~~~~Ia~afgVPp~~lG~~~~~~~~~~~~~ss~~~sn~e~~~~~f~~~tL~P~l~~ie~~ln~~L~~~~~--~~~~~~f- 430 (563) T protein:vir:99 354 LINIISALYGIDPAEIGFPNRGGATGSKGGSTLNEADPGKKQQQSQNKGLQPLLRFIEDLVNRHIISEYG--DKYTFQF- 430 (563) T ss_pred HHHHHHHHhCCCHHHccccccccccccccccchhhccHHHHHHHHHHHHHHHHHHHHHHHHHhhhchhcc--cccEEEe- Confidence 9999999999999999875543 5689999999999999999999999999999986532 3334433 Q ss_pred hhhHhhhhHHHHHHHHH--HHHhCCCCCHHHHHHHhCCCCCCCcceeeeccccccccccccccCC-------------C- Q lcl|Aclame:pro 351 VDAILRADIKTRYEAYR--TGIQGGFLKPNEARSKEDLPPEAGGDRLLVNGNMLPIDMAGQAYLK-------------G- 414 (429) Q Consensus 351 ~~~l~~~d~~~~~~~~~--~~~~~g~~t~NE~R~~~Gl~~~~~gD~~~~~~n~~~~~~~~~~~~~-------------~- 414 (429) ++.|.+++++.+. +++.+|+||+||+|+++||||+||||+++.|.+..+++........ + T Consensus 431 ----~r~D~~~~~e~~~~~~~~~~G~lT~NE~R~~~gl~Pi~gGD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 506 (563) T protein:vir:99 431 ----VGGDTKSATDKLNILKLETQIFKTVNEAREEQGKKPIEGGDIILDASFLQGTAQLQQDKQYNDGKQKERLQMMMSL 506 (563) T ss_pred ----ccCCHHHHHHHHHHHHHhcCCccCHHHHHHHhCCCCCCCcceeecccccccccccccccCCCccccchhhhhcccc Confidence 5667777777654 4688999999999999999999999999999887766543221110 0 Q ss_pred --CCCCCCCCCCCCCCC Q lcl|Aclame:pro 415 --GDTNGEVSKEGNEGN 429 (429) Q Consensus 415 --g~~~~~~~~~~~~~n 429 (429) ++....++.+.++++ T Consensus 507 ~~~~~~~~~~~~~~~~~ 523 (563) T protein:vir:99 507 LEGDNDDSEEGQSTDSS 523 (563) T ss_pred cCCCCCCCCCCCCCCCC Confidence 000000111111111 No 80 >protein:vir:95599 Length: 563 # NCBI annotation: ORF014 # Family: family:all:2446 # MgeID: mge:1577 # MgeName: G1 # Cross-refs: genbank:acc:YP_240900;genbank:gi:66394963;genbank:GeneID:5132540 Probab=100.00 E-value=3e-76 Score=434.65 Aligned_cols=413 Identities=16% Similarity=0.188 Sum_probs=306.5 Q ss_pred CchhhhhhcccccccccccccCCchHHHHHhhc------CCCCcc--eec----hhhhhccHHHHHHHHHHHHhhcc--- Q lcl|Aclame:pro 1 MDSVKKFFNFEKRQTSQVIELNKDDEKLLEWLG------ISPSTI--SVK----GKNALKVATVFACIKILSESVSK--- 65 (429) Q Consensus 1 Mg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~--~~~----~~~a~~~~~v~~~i~~ia~~ia~--- 65 (429) +..+++..+...++-.++ +..... ..++.. ..+ .+.+-.+++|.+||+.+++.||. T Consensus 43 ~~~~~~~~~~~~~a~~~~---------~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~n~i~~~~I~t~~~~vA~~~~ 113 (563) T protein:vir:95 43 YQDLTKSLYGQQQAYAEP---------FIEMMDTNPEFRDKRSYMKNEHNLHDVLKKFGNNPILNAIILTRSNQVAMYCQ 113 (563) T ss_pred HHHHHhhhccCCCcchhh---------hHhhhcccccccccccCCCCcccHHHHHHHhhcchHHHHHHHHHHHHHHHHhh Confidence 455554433222221111 222111 111111 111 12233478899999999999885 Q ss_pred ----------CceEEEecCCceeee--eecchhhhhhc---ccCcCC-CCHHHHHHHHHHHHHhhCCeEEEEe--eCCCC Q lcl|Aclame:pro 66 ----------LPLKIYQEDEYGIQR--GTKHYLNNLLR---LRPNPY-MSSMNFFGSLEAQKNLYGNSYANIE--FDRKG 127 (429) Q Consensus 66 ----------~~~~~~~~~~~~~~~--~~~~~~~~~l~---~~PN~~-~s~~~~~~~~~~~~l~~G~~~~~~~--~~~~g 127 (429) ++++++..+.++... ...|++..+|. ..|++. +|+++|++.++.+++++||+|++++ ++..| T Consensus 114 ~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~p~~~t~~~f~~~lv~~lll~Gn~~~~~~~~rd~~G 193 (563) T protein:vir:95 114 PARYSEKGLGFEVRLRDLDAEPGRKEKEEMKRIEDFIVNTGKDKDVDRDSFQTFCKKIVRDTYIYDQVNFEKVFNKNNKT 193 (563) T ss_pred hhhhhcccccceeEEeecCCCcchhhhhhhHHHHHHhhhcCCCCCCCcchHHHHHHHHHHHHHhcCCeEEEEEEEecCCC Confidence 577777766544322 22345544432 123333 5889999999999999999999865 77789 Q ss_pred ceEEEEeeCCcceEEEEcCCcceeeeeeEEEeecccCceEEEccceEEEeecCCCCC---cccccCHHHHHHHHHHHHHH Q lcl|Aclame:pro 128 KVQALWPIDASKVTVYIDDVGLLNSKTKMWYVVNTGGQQRVLKPEEILHFKNGITLD---GLVGVPTMEYLKSTLENSAS 204 (429) Q Consensus 128 ~~~~l~~l~p~~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~evih~~~~~~~~---~~~G~s~~~~~~~~i~~~~~ 204 (429) ++.+||||+|++|++..+.++........++....++....|++++|||++.+...+ +.+|+||+.++...+.++.+ T Consensus 194 ~~~~L~pl~p~~V~v~~~~~g~~~~~~~~y~~~~~g~~~~~~~~~evI~~~~~~~~d~~~~~~G~Spi~~a~~~i~~~~~ 273 (563) T protein:vir:95 194 KLEKFIAVDPSTIFYATDKKGKIIKGGKRFVQVVDKRVVASFTSRELAMGIRNPRTELSSSGYGLSEVEIAMKEFIAYNN 273 (563) T ss_pred ceEEEEEeCCceeEEEECCCCceeccceeEEEEeCCceeEEecCcceEEEeccCCCCcccCcccchHHHHHHHHHHHHHH Confidence 999999999999999998887666555566666666777789999988776554333 67899999999999999999 Q ss_pred HHHHHHHHHHccCCcceEEEeCCC--CCHHHHHHHHHHHHHHhcccccccce-eecCCCceeEecCCChhHHHHHHHHHH Q lcl|Aclame:pro 205 ADKFINNFYKQGLQVKGLVQYVGD--LNEDAKKVFRENFESMSSGLQNSHRI-ALMPVGYQFQPISLNMSDAQFLENTEL 281 (429) Q Consensus 205 ~~~~~~~~~~ng~~~~~~~~~~~~--~~~e~~~~~~~~~~~~~~g~~~~~~~-~vl~~g~~~~~~~~~~~d~~~~e~~~~ 281 (429) +++++.++|+||++|+|+|+++.+ +++++.+++++.|++.++|..|+|++ +|+++|++|+++++++.|++|+|.+++ T Consensus 274 ~~~~~~~~f~ng~~p~giL~~~~~~~ls~e~~~~~~~~~~~~~~G~~nagk~~~vl~~G~~~~~l~~~~~d~qfle~~~~ 353 (563) T protein:vir:95 274 TESFNDRFFSHGGTTRGILQIRSDQQQSQHALENFKREWKSSLSGINGSWQIPVVMADDIKFVNMTPTANDMQFEKWLNY 353 (563) T ss_pred HHHHHHHHHHccCCCceEEEeCCCCCCCHHHHHHHHHHHHHHhccccccccceEEcCCCceEEeccCChhHHHHHHHHHH Confidence 999999999999999999998754 69999999999999999999999996 789999999999999999999999999 Q ss_pred HHHHHHHHhcCChhhcCCcccc-----------ccccHHHHHHHHHHHHHhHHHHHHHHHHHHhhccchhhcchhhhhhh Q lcl|Aclame:pro 282 TIRQIATAFGIKMHQLNDLSKA-----------TLNNIEQQQQQFYTDTLQATLTMYEQEMTYKLFLDSELDKGFYSKFN 350 (429) Q Consensus 282 ~~~~Ia~~fgvp~~~l~~~~~~-----------~~~n~~~~~~~~~~~~l~P~~~~i~~~l~~~ll~~~~~~~~~~~~fd 350 (429) .+++||++|||||.+||..+.+ +++|.+++.+.|++.||.|+++.||++|+++|++..+ .+++++| T Consensus 354 ~~~~Ia~afgVPp~~lG~~~~~~~~~~~~~ss~~~sn~e~~~~~f~~~tL~P~l~~ie~~ln~~L~~~~~--~~~~~~f- 430 (563) T protein:vir:95 354 LINIISALYGIDPAEIGFPNRGGATGSKGGSTLNEADPGKKQQQSQNKGLQPLLRFIEDLVNRHIISEYG--DKYTFQF- 430 (563) T ss_pred HHHHHHHHhCCCHHHccccccccccccccccchhhccHHHHHHHHHHHHHHHHHHHHHHHHHhhhchhcc--cccEEEe- Confidence 9999999999999999875543 5689999999999999999999999999999986532 3334433 Q ss_pred hhhHhhhhHHHHHHHHH--HHHhCCCCCHHHHHHHhCCCCCCCcceeeeccccccccccccccCC-------------C- Q lcl|Aclame:pro 351 VDAILRADIKTRYEAYR--TGIQGGFLKPNEARSKEDLPPEAGGDRLLVNGNMLPIDMAGQAYLK-------------G- 414 (429) Q Consensus 351 ~~~l~~~d~~~~~~~~~--~~~~~g~~t~NE~R~~~Gl~~~~~gD~~~~~~n~~~~~~~~~~~~~-------------~- 414 (429) ++.|.+++++.+. +++.+|+||+||+|+++||||+||||+++.|.+..+++........ + T Consensus 431 ----~r~D~~~~~e~~~~~~~~~~G~lT~NE~R~~~gl~Pi~gGD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 506 (563) T protein:vir:95 431 ----VGGDTKSATDKLNILKLETQIFKTVNEAREEQGKKPIEGGDIILDASFLQGTAQLQQDKQYNDGKQKERLQMMMSL 506 (563) T ss_pred ----ccCCHHHHHHHHHHHHHhcCCccCHHHHHHHhCCCCCCCcceeecccccccccccccccCCCccccchhhhhcccc Confidence 5667777777654 4688999999999999999999999999999887766543221110 0 Q ss_pred --CCCCCCCCCCCCCCC Q lcl|Aclame:pro 415 --GDTNGEVSKEGNEGN 429 (429) Q Consensus 415 --g~~~~~~~~~~~~~n 429 (429) ++....++.+.++++ T Consensus 507 ~~~~~~~~~~~~~~~~~ 523 (563) T protein:vir:95 507 LEGDNDDSEEGQSTDSS 523 (563) T ss_pred cCCCCCCCCCCCCCCCC Confidence 000000111111111 No 81 >protein:vir:98643 Length: 395 # NCBI annotation: putative portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:1601 # MgeName: phi3396 # Cross-refs: genbank:acc:YP_001039921;genbank:gi:126011096;genbank:GeneID:4818479 Probab=100.00 E-value=7.8e-77 Score=437.83 Aligned_cols=383 Identities=14% Similarity=0.122 Sum_probs=295.3 Q ss_pred CchhhhhhcccccccccccccCCchHHHHHhhcCCCCcceechhhhhccHHHHHHHHHHHHhhccCceEEEecCCceeee Q lcl|Aclame:pro 1 MDSVKKFFNFEKRQTSQVIELNKDDEKLLEWLGISPSTISVKGKNALKVATVFACIKILSESVSKLPLKIYQEDEYGIQR 80 (429) Q Consensus 1 Mg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~~~~ 80 (429) ||||++|+. ++... .....+.. ....++.+.++++++||+||++||++||++|+++++.+++. T Consensus 1 MGlf~~~~~--~~~~~--~~~~~~~~----------~~~~~~~~~~~~~~~v~~~I~~ia~~iA~lp~~~~~~~~~~--- 63 (395) T protein:vir:98 1 MGILDFFSF--KKSGT--LSDDDSGS----------TTSEKLTNVVLKEDALYKCVNYLARIISKSTFRLKTPEKLT--- 63 (395) T ss_pred CcchhhhcC--CCccc--ccccccch----------hhhhhcchhhhhhHHHHHHHHHHHHHHhhCceeEEecCCcc--- Confidence 999998743 22211 11111111 11124567789999999999999999999999999876543 Q ss_pred eecchhhhhhcccCcCCCCHHHHHHHHHHHHHhhCCeEEEEeeCCCCceEEEEeeCCcceEEEEcCCcceeeeeeEEEee Q lcl|Aclame:pro 81 GTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVYIDDVGLLNSKTKMWYVV 160 (429) Q Consensus 81 ~~~~~~~~~l~~~PN~~~s~~~~~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~l~p~~v~~~~~~~~~~~~~~~~~~~~ 160 (429) ...|+++++|+.+||++||+++||+.++.+++++||||+++.++..+. +++..+....... ........ T Consensus 64 ~~~~~~~~lL~~~PN~~~t~~~f~~~~~~~lll~Gnayi~~~~~~~~~------~~~~~~~~~~~~~-----~~~~~~~~ 132 (395) T protein:vir:98 64 ENQKDWLYWINTKANPNQSASQFWVEVIQKLLVDGETLIFVIPGKGIY------VADSFTQDKKISG-----SQFKVSRV 132 (395) T ss_pred cccchHHHHHhhcCCCCCCHHHHHHHHHHHHhhcCceEEEEEeCCcee------cCCcccccccccC-----cccceeee Confidence 446899999999999999999999999999999999999998875432 2222222211110 00111111 Q ss_pred cccCceEEEccceEEEeecCCCCCcccccCHHHHHHHHHHHHHHH--HHHHHHHHHccCCcceEEEeCCCC-CHHHHHHH Q lcl|Aclame:pro 161 NTGGQQRVLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASA--DKFINNFYKQGLQVKGLVQYVGDL-NEDAKKVF 237 (429) Q Consensus 161 ~~~g~~~~~~~~evih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~--~~~~~~~~~ng~~~~~~~~~~~~~-~~e~~~~~ 237 (429) ...+..+.++++||||||+.++.....+.+++..+...+...... .....+++.+++.+++++...... ++++.+.. T Consensus 133 ~~~~~~~~~~~~evih~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (395) T protein:vir:98 133 QGQTYEKTFTFDQVIYLKNDNSDLMSKVESLWEEYGELLGHVINNQKIANQIRFTMIPPKDKVRERAQENSDGGRQSKSD 212 (395) T ss_pred cCceeeeEecCccEEEecCCCCCccccccchhhhHHHHHHHHHHHHHHHHHHHHhhccccccccccccccCCcHHHHHHH Confidence 222234679999999999877666666777777766666544444 344566788888888888776554 56667777 Q ss_pred HHHHHHHhccc-ccccceeecCCCceeEecCC------ChhHHHHHHHHHHHHHHHHHHhcCChhhcCCccccccccHHH Q lcl|Aclame:pro 238 RENFESMSSGL-QNSHRIALMPVGYQFQPISL------NMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKATLNNIEQ 310 (429) Q Consensus 238 ~~~~~~~~~g~-~~~~~~~vl~~g~~~~~~~~------~~~d~~~~e~~~~~~~~Ia~~fgvp~~~l~~~~~~~~~n~~~ 310 (429) ++.+++.+++. .+.+.++++++|++|+++++ ++.++|+.+.+++++++||++|||||.+|+ ++++|.++ T Consensus 213 ~~~~~~~~~~~~~~~~~v~~l~~g~~~~~l~~~~~~~~~~~~~q~~e~~~~~~~~Ia~~fgVP~~~l~----~~~sn~e~ 288 (395) T protein:vir:98 213 KDFFKRTVEKIRTESVVGIPVTANTNYEEYGSKNTGAVKSYVDDIKKLKDQYMAEFAEMLGIPISLLH----GDIADNQK 288 (395) T ss_pred HHHHHHHHhhhhcCCcceeecCCCceeEecccccccccChhHHHHHHHHHHHHHHHHHHhCCCHHHhc----CCcccHHH Confidence 77777777663 34566888999999999985 467889999999999999999999999996 46899999 Q ss_pred HHHHHHHHHHhHHHHHHHHHHHHhhccchhhcchhhhhhhhhhHhhhhHHHHHHHHHHHHhCCCCCHHHHHHHhCCCCCC Q lcl|Aclame:pro 311 QQQQFYTDTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEA 390 (429) Q Consensus 311 ~~~~~~~~~l~P~~~~i~~~l~~~ll~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~Gl~~~~ 390 (429) +.++|+++||.|++++||++|+++||++.++..+.+ ||++.+++.|.+++++.+.+++++|++|+||+|+++|+||+| T Consensus 289 ~~~~f~~~tl~P~~~~ie~~l~~kll~~~~~~~g~~--f~~~~l~~~d~~~~~~~~~~~~~~G~~T~NE~R~~~g~~Pi~ 366 (395) T protein:vir:98 289 NYELLLEGPIESLITNIVDGLEYAIFDKSETLQGSF--IKVTGLKNYDLFSISNQADKLISSGFVFIDEVREEIGLPELP 366 (395) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCChhhhcCcce--eeehhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCC Confidence 999999999999999999999999999888777655 666789999999999999999999999999999999999997 Q ss_pred C--cceeeeccccccccccccccCCCCCCCCCCCC Q lcl|Aclame:pro 391 G--GDRLLVNGNMLPIDMAGQAYLKGGDTNGEVSK 423 (429) Q Consensus 391 ~--gD~~~~~~n~~~~~~~~~~~~~~g~~~~~~~~ 423 (429) + ||++++++|++|++ .+||+++++.++ T Consensus 367 ~~~gD~~~~~~n~~~~~------~~gge~~~~~~~ 395 (395) T protein:vir:98 367 DGLGKVLYMTKNYESVL------ERGGEVDEEVET 395 (395) T ss_pred CCCCceeeecccceecc------cccCCCCCCCCC Confidence 6 99999999999997 356776666555 No 82 >protein:vir:4194 Length: 540 # NCBI annotation: putative portal protein # Family: family:all:1379 # ACLAME annotation(s): phi:0000161 - phage head/capsid # MgeID: mge:88 # MgeName: psiM100 # Cross-refs: genbank:acc:NP_071819;genbank:gi:11863102;genbank:GeneID:1257604 Probab=100.00 E-value=1.1e-75 Score=431.55 Aligned_cols=405 Identities=16% Similarity=0.143 Sum_probs=297.4 Q ss_pred Cchhhh--hhcccccccccccccCCchHHHHHhhcCCCCcceechhhhhccHHHHHHHHHHHHhhccCceEEEecCCcee Q lcl|Aclame:pro 1 MDSVKK--FFNFEKRQTSQVIELNKDDEKLLEWLGISPSTISVKGKNALKVATVFACIKILSESVSKLPLKIYQEDEYGI 78 (429) Q Consensus 1 Mg~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~~ 78 (429) |+|.+- ....+....++.... ..+.+|..+.- ......+.+..+++|++||++||+.||++|++++.++. T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~pp~-~~~~La~~~~~n~~v~scI~~ia~~ia~~~~~i~~~~~--- 77 (540) T protein:vir:41 6 LSIKSLEKYRAIKGDTDSQALKE----DRFEEYVEPKV-HPLVLLSLLQVNPYHASACSIKANDILRTGYLIDGDDG--- 77 (540) T ss_pred cChhhccchhhhhcccccccccc----CCCCccccCCC-CHHHHHHHHHhcHHHHHHHHHHHHHHhcCCceEecCcc--- Confidence 777652 111111111111111 11112222211 11111244557899999999999999999999976443 Q ss_pred eeeecchhhhhhcccCcCCCCHHHHHHHHHHHHHhhCCeEEEEeeCCCCceEEEEeeCCcceEEEEcCCcceeeee---e Q lcl|Aclame:pro 79 QRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVYIDDVGLLNSKT---K 155 (429) Q Consensus 79 ~~~~~~~~~~~l~~~PN~~~s~~~~~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~l~p~~v~~~~~~~~~~~~~~---~ 155 (429) .+..+ .||++||+++||++++.+++++||||++++++..|++.+||||+|++|++..+......... . T Consensus 78 ------~~~~~---lpN~~~t~~~f~~~~v~dlll~Gnayv~i~r~~~G~~~~L~~i~~~~V~v~~~~~~~~~~~d~~~~ 148 (540) T protein:vir:41 78 ------GVEEL---LRACRPSFEFILLQALEDLQVFNYCTLEVVRDDQGEPVRLDYIPAHTVRVHRDGSRYMQTWDGIHV 148 (540) T ss_pred ------chhhh---ccCCCCCHHHHHHHHHHHHHhcCCeEEEEEECCCCcEEEEEEeCCcceEEeEcCceeEeeecCcee Confidence 23332 49999999999999999999999999999999999999999999999999876643322111 1 Q ss_pred EE---------EeecccCceEEEccceEEEeecCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHHccCCcceEEEeC Q lcl|Aclame:pro 156 MW---------YVVNTGGQQRVLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYV 226 (429) Q Consensus 156 ~~---------~~~~~~g~~~~~~~~evih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~ 226 (429) .+ +....+...+.|+++||||||.+++.++.+|+||+.++...+....++.+++.++|+||++|+|+++++ T Consensus 149 ~~~~~~~~~~~~~~~~g~~~~~~~~~eViHir~~~~~~~~~G~Spi~~~~~~i~~~~~~~~~~~~~f~Ng~~p~giL~~~ 228 (540) T protein:vir:41 149 TYFKDYRYEGEVNPDNGEDQDGVGANEIIFIHLPSPICSYYGVPRYLSAAPSILAMQKIDEYNYAFFDNYTIPSYVITVT 228 (540) T ss_pred eeeecccccceeeccccccceeecccceEEecCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEeC Confidence 11 111233345679999999999999999999999999999999999999999999999999999999998 Q ss_pred CCCCHHH----------HHHHHHHHHHHhcc-cccccceeecC------CCceeEecCCChhHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 227 GDLNEDA----------KKVFRENFESMSSG-LQNSHRIALMP------VGYQFQPISLNMSDAQFLENTELTIRQIATA 289 (429) Q Consensus 227 ~~~~~e~----------~~~~~~~~~~~~~g-~~~~~~~~vl~------~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~ 289 (429) +.+++++ .+.+++.|++.++| ..|+|+++||+ +|++|++++++++|+||+|.+++++++||++ T Consensus 229 g~l~~e~~~~~~~~~~~~~~~~~~~~~~~~g~~~nag~~~vLe~~~~~~~g~~~~pl~~~~~d~qfle~~~~~~~eIa~a 308 (540) T protein:vir:41 229 GEFEDEMELGSDGEPTGRTVLQGLIEDNFKYLKEAPHTPLVFSIPGGDTVEVTFTPLNTSQKELSFREYAAEKKHDIAAA 308 (540) T ss_pred cccCchhccchHHHHHHHHHHHHHHHHHhccccccccceEEEecCCCcccceeEEecccchhHHHHHHHHHHHHHHHHHH Confidence 7765443 35567777777766 35889999985 7999999999999999999999999999999 Q ss_pred hcCChhhcCCcc--ccccccHHHHHHHHHHHHHhHHHHHHHHHHHHhhccchhhcchhhhhhhhhhHhhhhHHHHHHHHH Q lcl|Aclame:pro 290 FGIKMHQLNDLS--KATLNNIEQQQQQFYTDTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAILRADIKTRYEAYR 367 (429) Q Consensus 290 fgvp~~~l~~~~--~~~~~n~~~~~~~~~~~~l~P~~~~i~~~l~~~ll~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~ 367 (429) |||||.+||..+ ..+++|.+++.+.|+++||.|+++.|+++||++|++.. ..+++++||.+.+++.|.+++ +. T Consensus 309 fgVPp~~lG~~~~~~~n~sn~eq~~~~f~~~tL~P~~~~ie~~ln~~L~~~~--~~~~~i~f~~~~ll~~D~~~~---~~ 383 (540) T protein:vir:41 309 HMIDPYRLGITDVGPLGGNFAEVARRTYYESVVRPQQEIVSSVLTDFIQLKL--DPGARFVFNEEILMESEFVHN---YA 383 (540) T ss_pred hCCCHHHcCcccCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcc--CCceEEEecchhhcchHHHHH---HH Confidence 999999998764 35689999999999999999999999999999987653 457899999999998876554 56 Q ss_pred HHHhCCCCCHHHHHHHh-CCCCCCCcceeeeccccccccccccccCCCCCCCCC---------CCCC--------CCCCC Q lcl|Aclame:pro 368 TGIQGGFLKPNEARSKE-DLPPEAGGDRLLVNGNMLPIDMAGQAYLKGGDTNGE---------VSKE--------GNEGN 429 (429) Q Consensus 368 ~~~~~g~~t~NE~R~~~-Gl~~~~~gD~~~~~~n~~~~~~~~~~~~~~g~~~~~---------~~~~--------~~~~n 429 (429) +++++|++|+||+|+.+ |++| ++|.++.|.|+...+..++..........+ +..+ ..+.| T Consensus 384 ~lv~~G~lT~NE~Re~L~g~e~--gdd~~l~p~n~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~ 461 (540) T protein:vir:41 384 LLVQCGVLTPSEVREKLFGLDG--GPDMFMVPSSIGKSAMKRQKRNYEKNQINEIKRTYAKYKPRIQEIISSESPLEDKK 461 (540) T ss_pred HHHhCCCCCHHHHHHHhCcCcC--CCcccccccccccccccccccccCCCCccccccccchhcccccCcccccccccccc Confidence 78999999999999854 5444 446677787775544322211110000000 0000 00000 No 83 >protein:vir:3153 Length: 467 # NCBI annotation: capsid protein # Family: family:all:1379 # ACLAME annotation(s): phi:0000161 - phage head/capsid # MgeID: mge:316 # MgeName: PhiCh1 # Cross-refs: genbank:acc:NP_665924;genbank:gi:22091110;genbank:GeneID:951257 Probab=100.00 E-value=1.3e-75 Score=431.14 Aligned_cols=383 Identities=14% Similarity=0.125 Sum_probs=299.8 Q ss_pred hhhhh-ccHHHHHHHHHHHHhhccCceEEEecCCce---eeeeecch-hhhhhcccCcCCC--------CHHHHHHHHHH Q lcl|Aclame:pro 43 GKNAL-KVATVFACIKILSESVSKLPLKIYQEDEYG---IQRGTKHY-LNNLLRLRPNPYM--------SSMNFFGSLEA 109 (429) Q Consensus 43 ~~~a~-~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~---~~~~~~~~-~~~~l~~~PN~~~--------s~~~~~~~~~~ 109 (429) -+... .+|+|++||++||+.||++|++++...+.. +.....+. ...+++.+||+.| ++.+||+.++. T Consensus 1 l~~l~~~n~~v~~ci~~ia~~ia~~p~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~pn~~~~~~~~~~~t~~~~~~~~~~ 80 (467) T protein:vir:31 1 MAELLEHNETHAKCVHAKSRYVAGFGINIIPHPEAEDPDRDGEQYERVWDFWFGDDSNWQVGPMESERATATNVLQTAWT 80 (467) T ss_pred ChhhhhcCHHHHHHHHHHHHhhhcCCeEEEEccCcccccchhhhhhhHHHHhhccCCCccccchhhHhhHHHHHHHHHHH Confidence 22222 479999999999999999999998654321 11122222 3345666788765 66789999999 Q ss_pred HHHhhCCeEEEEeeCCCCceEEEEeeCCcceEEEEcCCcceeeee------------------------eEEEeecccCc Q lcl|Aclame:pro 110 QKNLYGNSYANIEFDRKGKVQALWPIDASKVTVYIDDVGLLNSKT------------------------KMWYVVNTGGQ 165 (429) Q Consensus 110 ~~l~~G~~~~~~~~~~~g~~~~l~~l~p~~v~~~~~~~~~~~~~~------------------------~~~~~~~~~g~ 165 (429) +++++||+|++++++..|++.+||||+|++|++..+......... ...+.....+. T Consensus 81 ~l~l~Gn~~i~~~r~~~G~~~~l~~l~~~~v~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (467) T protein:vir:31 81 DYEAIGWLTIEILTQTDGTPTGLAYVPGHTIRKRMDERGFVQLLEEKEKYFGVAGDRYQTNGNGDLDPVFVDADDGSTGT 160 (467) T ss_pred HHHhcCCeEEEEEECCCCcEEEEEEeCCceeEeeeecceeEeecCCceeeEEeccccceeecccceeeeeeeeccccccc Confidence 999999999999999999999999999999998776543221110 00111223456 Q ss_pred eEEEccceEEEeecCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHHccCCcceEEEeC-CCCCHHHHHHHHHHHHHH Q lcl|Aclame:pro 166 QRVLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYV-GDLNEDAKKVFRENFESM 244 (429) Q Consensus 166 ~~~~~~~evih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~-~~~~~e~~~~~~~~~~~~ 244 (429) .+.+++++|||+|.+++.++.+|+||+.++...+..+.++.+++.++|+||++|+|+++++ ..+++++.+++++.|++. T Consensus 161 ~~~~~~~diih~r~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~f~ng~~p~gil~~~~~~l~~e~~~~~~~~~~~~ 240 (467) T protein:vir:31 161 SVSNPANELIFKRNHSPLYPHYGAPDIIPAVKTIRGDSAAQDYNIDFFENDGVPRIAIIVKGAELTEKGREEMRNLIEDN 240 (467) T ss_pred eeEeccccEEEecCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEecCcCCCHHHHHHHHHHHHhh Confidence 6789999999999998899999999999999999999999999999999999999999976 468999999999999987 Q ss_pred hc-----------ccccccceeecCCCceeEecC--------CChhHHHHHHHHHHHHHHHHHHhcCChhhcCCcccccc Q lcl|Aclame:pro 245 SS-----------GLQNSHRIALMPVGYQFQPIS--------LNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKATL 305 (429) Q Consensus 245 ~~-----------g~~~~~~~~vl~~g~~~~~~~--------~~~~d~~~~e~~~~~~~~Ia~~fgvp~~~l~~~~~~~~ 305 (429) ++ |..++++++++++|+++.+++ .++.|+||++.+++++++||++|||||.+||..+.+++ T Consensus 241 ~~~~~~~~~~~~~g~~n~~~~~~l~~g~~~~~~~~~~~~ls~~~~~d~qf~e~~~~~~~~Ia~~fgVpp~~lG~~~~~~~ 320 (467) T protein:vir:31 241 NEDNHRTAFIETEKIVQNEDYLNLADGADRSDVEIRLEPLTVGIDEEASFLEFRGRNEHDILKVHDVPPVIAGVVESGAF 320 (467) T ss_pred hcchhhhhhhhhcccccccccccccCCCcccccceeEEeccccChhhHHHHHHHHHHHHHHHHHhCCCHHHcccCCCCCc Confidence 76 556888999998876555543 36789999999999999999999999999987766655 Q ss_pred -ccHHHHHHHHHHHHHhHHHHHHHHHHHHhhccchhhcchhhhhhhhhhHhhhhHHHHHHHHHHHHhCCCCCHHHHHHHh Q lcl|Aclame:pro 306 -NNIEQQQQQFYTDTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKE 384 (429) Q Consensus 306 -~n~~~~~~~~~~~~l~P~~~~i~~~l~~~ll~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~ 384 (429) ++.+++.+.|++.+|.|+++.|+++||+++++......+++++||++.+++.|.+++++.+..++++|++|+||+|+++ T Consensus 321 ~s~~e~~~~~f~~~~l~P~~~~ie~~ln~~l~~~~~~~~~~~i~f~~~~l~~~d~~~~~~~~~~~~~~G~~T~NE~R~~~ 400 (467) T protein:vir:31 321 STDAEEQRKEFAEETIQPKQHDFGELLYELVHKQGLDAPDWTIEFELAKPDTKLQDVEIASQRVQAMQGLLTVNELRDEF 400 (467) T ss_pred ccCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhhccCCceEEEecchhhccCHHHHHHHHHHHHhCCCcCHHHHHHHh Confidence 7899999999999999999999999999999887777889999999999999999999999999999999999999999 Q ss_pred CCCCCCCcceeeeccccccccccccccCCCCCCCCCCCCCCCCCC Q lcl|Aclame:pro 385 DLPPEAGGDRLLVNGNMLPIDMAGQAYLKGGDTNGEVSKEGNEGN 429 (429) Q Consensus 385 Gl~~~~~gD~~~~~~n~~~~~~~~~~~~~~g~~~~~~~~~~~~~n 429 (429) |+||+++++ +.+.+.......+.....++. ++.+.++.++. T Consensus 401 Gl~pi~d~~--~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 441 (467) T protein:vir:31 401 GFEPFPEEH--VYGGETLVAEVTGGSGPGGGI--GDQIEQLVEDR 441 (467) T ss_pred CCCCCCccc--ccCCcccccccccccCCCCcc--cCcCCCCCCCc Confidence 999996543 323222111111111111111 11111111111 No 84 >protein:vir:94869 Length: 378 # NCBI annotation: putative portal protein # Family: family:all:2379 # MgeID: mge:1532 # MgeName: P008 # Cross-refs: genbank:acc:YP_762515;genbank:gi:115304214;genbank:GeneID:5141182 Probab=100.00 E-value=8.1e-76 Score=432.27 Aligned_cols=361 Identities=16% Similarity=0.164 Sum_probs=281.4 Q ss_pred CchhhhhhcccccccccccccCCchHHHHHhhcCCCCcceechhhhhccHHHHHHHHHHHHhhccCceEEEecCCcee-- Q lcl|Aclame:pro 1 MDSVKKFFNFEKRQTSQVIELNKDDEKLLEWLGISPSTISVKGKNALKVATVFACIKILSESVSKLPLKIYQEDEYGI-- 78 (429) Q Consensus 1 Mg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~~-- 78 (429) ||||++++++++...... .+++...+....++++++|++||++||++||++|+++++.++++. T Consensus 1 M~if~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~v~~~v~~Ia~~iA~lp~~~~~~~~~~~~~ 65 (378) T protein:vir:94 1 MNLFGKVVSFSRGKLNND---------------TQRVTAWQNEAVEYTSAFVTNIHNKIANEITKVEFNHVKYKKSDVGS 65 (378) T ss_pred CchhHHhHhhhhcccccC---------------cceeeeeecchhhhhhHHHHHHHHHHHHhHhhCceeeeeeccccccc Confidence 999999987654322111 111111233345678899999999999999999999988765432 Q ss_pred ---eeeecchhhhhhcccCcCCCCHHHHHHHHHHHHHhhCCeEEEEee-CCCCceEEEEeeCCcceEEEEcCCcceeeee Q lcl|Aclame:pro 79 ---QRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEF-DRKGKVQALWPIDASKVTVYIDDVGLLNSKT 154 (429) Q Consensus 79 ---~~~~~~~~~~~l~~~PN~~~s~~~~~~~~~~~~l~~G~~~~~~~~-~~~g~~~~l~~l~p~~v~~~~~~~~~~~~~~ 154 (429) .....|+++++|+.+||++||+++||+.++.++++.||+|++++. +..|.+..+++. T Consensus 66 ~~~~~~~~~~l~~lLn~~PN~~~t~~~f~~~~~~~lll~Gnayi~~i~~~~~g~~~~~~~~------------------- 126 (378) T protein:vir:94 66 DTLISMAGSDLDEVLNWSSKGERNSMEFWQKVIKKLLTTRYIDLYPIFDSETGELLDLLFA------------------- 126 (378) T ss_pred ccccccccchHHHHHhhcCCCCCCHHHHHHHHHHHHhhcCCeEEEEEeeCCCCcEEEEEEe------------------- Confidence 234579999999999999999999999999999999999998644 445554333221 Q ss_pred eEEEeecccCceEEEccceEEEeecCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHHccCCcceEEEeCCCCCHHHH Q lcl|Aclame:pro 155 KMWYVVNTGGQQRVLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGDLNEDAK 234 (429) Q Consensus 155 ~~~~~~~~~g~~~~~~~~evih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~~e~~ 234 (429) .++ ++|++++|+|++.+...+ .+.+++..+...+.. .++ ++.++|+++.+..+++++. T Consensus 127 -------~~~--~~~~~~dvih~~~~~~~~--~~~~~~~~~~~~~~~----------~~~-~~~~~g~l~~~~~l~~~~~ 184 (378) T protein:vir:94 127 -------NDK--KEYKPEELVRLTSPFYIN--EDTSILDNALASIQT----------KLE-QGKLRGLLKINAFLDIDNT 184 (378) T ss_pred -------cCc--EEechhceeeecCcCCcc--cchhHHHHHHHHHHH----------HHh-hCCcccceeeCCcCCHHHH Confidence 122 458899999999665443 355666666554332 223 3478899999999998876 Q ss_pred HHHHHHHHHHhc---ccccccceeecCCCceeEecCCChhHHHHHHHHHHHHHHHHHHhcCChhhcCCccccccccHHHH Q lcl|Aclame:pro 235 KVFRENFESMSS---GLQNSHRIALMPVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKATLNNIEQQ 311 (429) Q Consensus 235 ~~~~~~~~~~~~---g~~~~~~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~fgvp~~~l~~~~~~~~~n~~~~ 311 (429) ++.+++|++.+. +..++++++++++|++|+++++++.++++ +.+++..++||++|||||.+|++ ++.+++ T Consensus 185 ~~~~e~~~~~~~~~~~~~n~~~~~vl~~g~~~~~l~~~~~~~~~-~~~~~~~~~Ia~~fgvPp~~l~g------~~~e~~ 257 (378) T protein:vir:94 185 QEYREKALATIKNMQEGSSYNGLTPVDNKTEIVELKKDYSVLNK-DEIDLIKSELLTGYFMNENILLG------TATQEQ 257 (378) T ss_pred HHHHHHHHHHHHHhhcccccccceeccCCceEEEccCChHHhhH-HHHHHHHHHHHHHhCCCHHHhcC------CchHHH Confidence 666666655432 33577889999999999999999999996 77899999999999999999953 334788 Q ss_pred HHHHHHHHHhHHHHHHHHHHHHhhccchhhcchh------hhhhhhhhHhhhhHHHHHHHHHHHHhCCCCCHHHHHHHhC Q lcl|Aclame:pro 312 QQQFYTDTLQATLTMYEQEMTYKLFLDSELDKGF------YSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKED 385 (429) Q Consensus 312 ~~~~~~~~l~P~~~~i~~~l~~~ll~~~~~~~~~------~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~G 385 (429) ..+|+++||.|++..|+++|+++||++.++..++ +++||++.+++.|.+++++.+.+++++|++|+||+|+++| T Consensus 258 ~~~f~~~tl~P~~~~ie~~l~~~Ll~~~e~~~g~~~~~~~~~~f~~~~l~~~d~~~~~e~~~~~~~~G~~t~NE~R~~~g 337 (378) T protein:vir:94 258 QIYFYNSTIIPLLIQLEKELTYKLISTNRRRVVKGNLYYERIIVDNQLFKFATLKELIDLYHENINGPIFTQNQLLVKMG 337 (378) T ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCChhHhhhhhhhcccceeEeecchhhhcCHHHHHHHHHHHHhCCCcCHHHHHHHhC Confidence 8999999999999999999999999988776664 4669999999999999999999999999999999999999 Q ss_pred CCCCCCcceeeeccccccccccccccCCCCCCCCCCCCCCCCCC Q lcl|Aclame:pro 386 LPPEAGGDRLLVNGNMLPIDMAGQAYLKGGDTNGEVSKEGNEGN 429 (429) Q Consensus 386 l~~~~~gD~~~~~~n~~~~~~~~~~~~~~g~~~~~~~~~~~~~n 429 (429) +||+||||++++|+|++|++..++.+.. .++.++++|+| T Consensus 338 ~~p~~ggd~~~~~~n~~~~~~~~~~~~~-----~~~~~~~~e~~ 376 (378) T protein:vir:94 338 EQPIEGGDVYIANLNAVAVKNLSDLQGN-----RKDVTSTDETN 376 (378) T ss_pred CCCCCCCCeeeecccccchhcchhcccc-----cCCCCCCCCCC Confidence 9999999999999999999876644321 12233444444 No 85 >protein:vir:858 Length: 378 # NCBI annotation: putative portal protein # Family: family:all:2379 # MgeID: mge:18 # MgeName: bIL170 # Cross-refs: genbank:acc:NP_047117;genbank:gi:9630570;genbank:GeneID:1261758 Probab=100.00 E-value=1e-75 Score=431.72 Aligned_cols=361 Identities=16% Similarity=0.164 Sum_probs=281.4 Q ss_pred CchhhhhhcccccccccccccCCchHHHHHhhcCCCCcceechhhhhccHHHHHHHHHHHHhhccCceEEEecCCcee-- Q lcl|Aclame:pro 1 MDSVKKFFNFEKRQTSQVIELNKDDEKLLEWLGISPSTISVKGKNALKVATVFACIKILSESVSKLPLKIYQEDEYGI-- 78 (429) Q Consensus 1 Mg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~~-- 78 (429) ||||++++.+.+...... .++....+....++++++|++||++||++||++|+++++.++++. T Consensus 1 M~~f~k~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~v~~~v~~ia~~iA~lp~~~~~~~~~~~~~ 65 (378) T protein:vir:85 1 MNLFGKVVSFSRGKLNND---------------TQRVTAWQNEAVEYTSAFVTNIHNKIANEITKVEFNHVKYKKSDVGS 65 (378) T ss_pred CchhhhhhhhhhcccccC---------------CcceeeeeccchhhhhHHHHHHHHHHHHhHhhCceeEEEEecccccc Confidence 999999876554221110 111111223345678899999999999999999999998876543 Q ss_pred ---eeeecchhhhhhcccCcCCCCHHHHHHHHHHHHHhhCCeEEEEee-CCCCceEEEEeeCCcceEEEEcCCcceeeee Q lcl|Aclame:pro 79 ---QRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEF-DRKGKVQALWPIDASKVTVYIDDVGLLNSKT 154 (429) Q Consensus 79 ---~~~~~~~~~~~l~~~PN~~~s~~~~~~~~~~~~l~~G~~~~~~~~-~~~g~~~~l~~l~p~~v~~~~~~~~~~~~~~ 154 (429) .....|+++++|+.+||++||+++||+.++.+++++||||++++. +..|.+..+++ T Consensus 66 ~~~~~~~~~~l~~lL~~~PN~~~t~~~f~~~~~~~lll~Gnayi~~i~~~~~g~~~~~~~-------------------- 125 (378) T protein:vir:85 66 DTLISMAGSDLDEVLNWSYKGEHNSMEFWQKVIKKLLCTRYVDLYPIFDSETGELLDLLF-------------------- 125 (378) T ss_pred ccccccccchHHHHHhccCCCCCCHHHHHHHHHHHHhhcCCeEEEEeecCCCceEEEEEe-------------------- Confidence 235679999999999999999999999999999999999998644 44454332222 Q ss_pred eEEEeecccCceEEEccceEEEeecCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHHccCCcceEEEeCCCCCHHHH Q lcl|Aclame:pro 155 KMWYVVNTGGQQRVLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGDLNEDAK 234 (429) Q Consensus 155 ~~~~~~~~~g~~~~~~~~evih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~~e~~ 234 (429) ..+ .+.+.++||||++.+...+. +.+++..+...+. ..++ ++.++|+++.+..+++++. T Consensus 126 ------~~~--~~~~~~~dvih~~~~~~~~~--~~~~~~~a~~~~~----------~~~~-~~~~~g~l~~~~~l~~~~~ 184 (378) T protein:vir:85 126 ------AND--KKEYKPEELVRLVSPFYINE--DTSILDNALASIQ----------TKLE-QGKLRGLLKINAFLDIDNT 184 (378) T ss_pred ------cCC--CEEEcccceEEEecCcCccc--hhhHHHHHHHHHH----------HHHh-cCCcceEEEeCCcCCHHHH Confidence 112 24578899999986544332 3444544443322 2233 4578999999999999988 Q ss_pred HHHHHHHHHHh---cccccccceeecCCCceeEecCCChhHHHHHHHHHHHHHHHHHHhcCChhhcCCccccccccHHHH Q lcl|Aclame:pro 235 KVFRENFESMS---SGLQNSHRIALMPVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKATLNNIEQQ 311 (429) Q Consensus 235 ~~~~~~~~~~~---~g~~~~~~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~fgvp~~~l~~~~~~~~~n~~~~ 311 (429) ++++++|++.+ .+..+++++++|++|++|+++++++.++++ +.+++..++||++|||||.+|++ ++.+++ T Consensus 185 ~~~~~~~~~~~~~~~~~~~~g~~~vl~~g~~~~~l~~~~~~~~~-~~~~~~~~~Ia~~fgVPp~~l~~------s~~e~~ 257 (378) T protein:vir:85 185 QEYREKALATIKNMQEGSSYNGLTPVDNKTEIVELKKDYSVLNK-DEIELIKSELLTGYFMNENILLG------TATQEQ 257 (378) T ss_pred HHHHHHHHHHHHHhhcccccccceecCCCceEEeccCChhhhhH-HHHHHHHHHHHHHhCCCHHHhcC------CchHHH Confidence 88877776654 244678999999999999999999999996 77899999999999999999953 456889 Q ss_pred HHHHHHHHHhHHHHHHHHHHHHhhccchhhcchh------hhhhhhhhHhhhhHHHHHHHHHHHHhCCCCCHHHHHHHhC Q lcl|Aclame:pro 312 QQQFYTDTLQATLTMYEQEMTYKLFLDSELDKGF------YSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKED 385 (429) Q Consensus 312 ~~~~~~~~l~P~~~~i~~~l~~~ll~~~~~~~~~------~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~G 385 (429) ..+|+++||.|++++||++|+++||++.++..++ .+.||.+.+++.|.+++++.+.+++++|++|+||+|+++| T Consensus 258 ~~~f~~~tL~P~~~~ie~~l~~kLl~~~er~~~~~~~~~~~~~f~~~~l~~~d~~~~~~~~~~~~~~G~~T~NE~R~~lg 337 (378) T protein:vir:85 258 QIYFYNSTIIPLLIQLEKELTYKLISTNRRRVVKGNLYYERIIVDNQLFKFATLKELIDLYHENINGPIFTQNQLLVKMG 337 (378) T ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCChhhhhhhhhccccceeeecchhhhhcCHHHHHHHHHHHHhCCCcCHHHHHHHhC Confidence 9999999999999999999999999998777665 3679999999999999999999999999999999999999 Q ss_pred CCCCCCcceeeeccccccccccccccCCCCCCCCCCCCCCCCCC Q lcl|Aclame:pro 386 LPPEAGGDRLLVNGNMLPIDMAGQAYLKGGDTNGEVSKEGNEGN 429 (429) Q Consensus 386 l~~~~~gD~~~~~~n~~~~~~~~~~~~~~g~~~~~~~~~~~~~n 429 (429) +||+||||++++|+|++|++..++.+... +..++++|+| T Consensus 338 l~p~~gGD~~~~~~N~~~~~~~~~~~~~~-----~~~~~~~e~~ 376 (378) T protein:vir:85 338 EQPIEGGDIYIANLNAVAVKNLSDLQGSR-----KDVASTDETN 376 (378) T ss_pred CCCCCCCCeEeecccccccccchhhcCcc-----CCCCCCCCCC Confidence 99999999999999999998766443221 2223333444 No 86 >protein:vir:4156 Length: 542 # NCBI annotation: portal protein # Family: family:all:1379 # ACLAME annotation(s): phi:0000161 - phage head/capsid # MgeID: mge:87 # MgeName: psiM2 # Cross-refs: genbank:acc:NP_046965;genbank:gi:9630535;genbank:GeneID:1261709 Probab=100.00 E-value=8.5e-75 Score=426.66 Aligned_cols=403 Identities=16% Similarity=0.132 Sum_probs=294.0 Q ss_pred CchhhhhhcccccccccccccCCchHHHHHhhcCCCCcceechh----hhhccHHHHHHHHHHHHhhccCceEEEecCCc Q lcl|Aclame:pro 1 MDSVKKFFNFEKRQTSQVIELNKDDEKLLEWLGISPSTISVKGK----NALKVATVFACIKILSESVSKLPLKIYQEDEY 76 (429) Q Consensus 1 Mg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~ 76 (429) |+|.+.. ...+..+............+.++..+ +++.. .+..+++|++||++||++||++||+++..+.. T Consensus 6 ~~i~s~~-~~~~i~~~~~~s~~~~~~~~~~~~~p-----p~~~~~la~l~~~n~~v~scI~~ia~~IA~l~~~~~~~~~~ 79 (542) T protein:vir:41 6 LSIRSLE-KYKAIKREEVESQALGETRFEEYVEP-----KVNPLVLLSLLQVNPYHASACSIKANDIIRTGYILEGDDEG 79 (542) T ss_pred ccccccc-cchhhhhccccccccccccCCccccC-----CCCHHHHHHHHhhcHHHHHHHHHHHHHHhhCceeeecccch Confidence 3333311 11110111110000000111112111 23332 23458999999999999999999999754332 Q ss_pred eeeeeecchhhhhhcccCcCCCCHHHHHHHHHHHHHhhCCeEEEEeeCCCCceEEEEeeCCcceEEEEcCCcceeeee-- Q lcl|Aclame:pro 77 GIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVYIDDVGLLNSKT-- 154 (429) Q Consensus 77 ~~~~~~~~~~~~~l~~~PN~~~s~~~~~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~l~p~~v~~~~~~~~~~~~~~-- 154 (429) .+++..||++|++++||+.++.+++++||+|++++++..|++.+|+|++|++|++..+......... T Consensus 80 -----------~l~~~lpN~~~s~~~f~~~~v~~lll~Gnayi~i~rd~~G~~~~L~~l~~~~v~v~~d~~~~~~~~~~~ 148 (542) T protein:vir:41 80 -----------VVDEFIRACKPSFEYVLLRALEDLQVFNYCTLEVVRDDRGDPIRFEYIPSHTIRVHKDGSRYRQTWDGV 148 (542) T ss_pred -----------hhhhhcCCCCCCHHHHHHHHHHHHhhcCCeEEEEEEcCCCcEEEEEEEcCcceEEEEcCCeeEeeecCC Confidence 1234459999999999999999999999999999999999999999999999999887654322110 Q ss_pred -eEE---E------eecccCceEEEccceEEEeecCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHHccCCcceEEE Q lcl|Aclame:pro 155 -KMW---Y------VVNTGGQQRVLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQ 224 (429) Q Consensus 155 -~~~---~------~~~~~g~~~~~~~~evih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~ 224 (429) ..+ | ....+.....++++||||||.+++.++.+|+||+.++...+....++.+++.++|+||++|+|+++ T Consensus 149 ~~~~~~~y~~~~~~~~~~g~~~~~~~~~eIiHir~~~~~~~~~Glspi~~~~~~i~~~~~~~~~~~~~f~Ng~~p~gIL~ 228 (542) T protein:vir:41 149 NITHFKDYRYEGEINPETGEDQDSVGANELVFIHIPSPVCSYYGVPRYVSAAPAILAMQKIDEYNYAFFDNYTIPSYVIT 228 (542) T ss_pred cceeEEeecccccccccccccccccCcccEEEecCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhccCCccEEEE Confidence 000 0 111222345688999999999988999999999999999999999999999999999999999998 Q ss_pred eCC----------CCCHHHHHHHHHHHHHHhccc-ccccceeecC------CCceeEecCCChhHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 225 YVG----------DLNEDAKKVFRENFESMSSGL-QNSHRIALMP------VGYQFQPISLNMSDAQFLENTELTIRQIA 287 (429) Q Consensus 225 ~~~----------~~~~e~~~~~~~~~~~~~~g~-~~~~~~~vl~------~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia 287 (429) ++. .+++++.+++++.|++.+.|. .|+|+++|++ +|++|+++++++.|++|+|.+++++++|| T Consensus 229 ~~~~l~de~~~~~~~~~e~~~~lk~~~~~~~~g~~~n~gk~~vL~~~~~~~~g~~~~pl~~~~~d~qfle~~~~~~~~Ia 308 (542) T protein:vir:41 229 VTGEFEDELEEDPDGNPTGRTVIQALIEDNFKHLKEAPHTPLVFSIPGGDTVKVTFTPLNTSQKELSFREYAAEKKYDIA 308 (542) T ss_pred eCCccccccccccccCHHHHHHHHHHHHHHHhhhhcccCceeEeeccCCcccceeEEEcCCChhHHHHHHHHHHHHHHHH Confidence 864 457899999999999999875 5788899984 79999999999999999999999999999 Q ss_pred HHhcCChhhcCCcccc--ccccHHHHHHHHHHHHHhHHHHHHHHHHHHhhccchhhcchhhhhhhhhhHhhhhHHHHHHH Q lcl|Aclame:pro 288 TAFGIKMHQLNDLSKA--TLNNIEQQQQQFYTDTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAILRADIKTRYEA 365 (429) Q Consensus 288 ~~fgvp~~~l~~~~~~--~~~n~~~~~~~~~~~~l~P~~~~i~~~l~~~ll~~~~~~~~~~~~fd~~~l~~~d~~~~~~~ 365 (429) ++|||||.+||..+.+ +++|++++.+.|+++||.|+++.|+++||+++++..+ .+++++|+.+.+++.|..+ . T Consensus 309 ~afgVPp~~lG~~~~~t~n~sn~Eq~~~~f~~~tL~P~~~~ie~~ln~~L~~~~~--~~~~~~f~~~~ll~~d~~~---~ 383 (542) T protein:vir:41 309 AAHMIDPYRLGIADTGPLGGNFAEVTRRTYYESVVRPQQNIISSILTDFFQVKFN--PKTRFKFNDETLLESDSVR---N 383 (542) T ss_pred HHhCCCHHHhCcCCCcccccccHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccC--CceEEEecchhhcchHHHH---H Confidence 9999999999987655 5589999999999999999999999999999887654 4679999999998877544 4 Q ss_pred HHHHHhCCCCCHHHHHHHh-CCCCCCCcceeeeccccccccccccccCCCCCCCC--CCC---CCCCC-CC Q lcl|Aclame:pro 366 YRTGIQGGFLKPNEARSKE-DLPPEAGGDRLLVNGNMLPIDMAGQAYLKGGDTNG--EVS---KEGNE-GN 429 (429) Q Consensus 366 ~~~~~~~g~~t~NE~R~~~-Gl~~~~~gD~~~~~~n~~~~~~~~~~~~~~g~~~~--~~~---~~~~~-~n 429 (429) +..++++|++|+||+|+.+ |++| ++|.++.|.|........... +.+.+. +.. .++++ -| T Consensus 384 ~~~~v~~GilT~NE~Re~L~g~~p--gdd~~l~p~~~~~~~~~~~~~--n~~~~~~~~~~k~~~k~~~~~~ 450 (542) T protein:vir:41 384 CALLVQSGVLTPAEARERLFGLDG--GPDIFMVPSKGAAKSVKRQER--NYEKNQIREIRKIYAKYRPRFN 450 (542) T ss_pred HHHHHhCCCCCHHHHHHhhCCCCC--CCccccccccccccccccCCc--CCCCCchhhhhhcccccCcccc Confidence 6678999999999999853 5544 334555666653322111100 000000 000 01100 11 No 87 >protein:vir:99452 Length: 651 # NCBI annotation: hypothetical protein # Family: family:all:1379 # ACLAME annotation(s): phi:0000161 - phage head/capsid # MgeID: mge:1595 # MgeName: BJ1 # Cross-refs: genbank:acc:YP_919077;genbank:gi:119757035;genbank:GeneID:4606105 Probab=100.00 E-value=7.7e-70 Score=399.48 Aligned_cols=422 Identities=14% Similarity=0.106 Sum_probs=310.0 Q ss_pred Cchhhhhhc-ccccc-----c----ccccccCCchHHHHHhhc-CCCCcceechhhhhc-cHHHHHHHHHHHHhhccCce Q lcl|Aclame:pro 1 MDSVKKFFN-FEKRQ-----T----SQVIELNKDDEKLLEWLG-ISPSTISVKGKNALK-VATVFACIKILSESVSKLPL 68 (429) Q Consensus 1 Mg~~~~~~~-~~~~~-----~----~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~~-~~~v~~~i~~ia~~ia~~~~ 68 (429) |+--.+=.+ ..-+. + ....+...+...+..--+ ..+...+.......+ ++++++||+++++.||++.| T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~L~~~~e~~~~~~~~i~~~~~~iag~g~ 80 (651) T protein:vir:99 1 MTDTTGETQETKVHVEGLGGEADLAKSPNSTQIPDHRIQSHNVGVNPPYNPDRLAAFLELNETLATGIRKKSRYEVGFGF 80 (651) T ss_pred CCCccceeeeeEEEeecccccccccccccccccchhhhcccCCCCCCCCCHHHHHHHHhcChHHHHHHHHHhhhhhccCc Confidence 433210000 00000 0 000001111111111101 111111112233344 89999999999999999999 Q ss_pred EEEecCC---ceeee----------eecchhhhhhcccCcCCCCHHHHHHHHHHHHHhhCCeEEEEeeCCCCceEEEEee Q lcl|Aclame:pro 69 KIYQEDE---YGIQR----------GTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPI 135 (429) Q Consensus 69 ~~~~~~~---~~~~~----------~~~~~~~~~l~~~PN~~~s~~~~~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~l 135 (429) .+....+ +.... ...|+.+..+...+|+.++..++++.++.|++.+|++|+.++++..|++.+|+.+ T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~n~~~t~~~i~~~~~~Dle~tGna~ieiIrn~~g~pv~L~~l 160 (651) T protein:vir:99 81 DLVPAQGVDGDDASDAQREVARNFWRGRSSRWQTGPNQAKTPATPERVKELARQDYHGVGWLALEMLTDIEGRPVGLAYV 160 (651) T ss_pred eeeecccCCCCccchHHHHHHHHHhhccchhhcccccccCCCCCHHHHHHHHHHHHHHHhhHhhhhhhcCccchhhhhhc Confidence 9865321 11111 1123344444456899999999999999999999999999999999999999999 Q ss_pred CCcceEEEEcCCcce----------------------------------e-e---------------------------- Q lcl|Aclame:pro 136 DASKVTVYIDDVGLL----------------------------------N-S---------------------------- 152 (429) Q Consensus 136 ~p~~v~~~~~~~~~~----------------------------------~-~---------------------------- 152 (429) ++..+++..+..... . . T Consensus 161 p~~~~Rv~~~~~~~~~~~~~ll~~~pn~~~~~~~~~~~~q~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~d~~~ 240 (651) T protein:vir:99 161 PARTVRVRRPQNRFDQPRHPEEGRYVDGDVADIASRGYVQIRNGNRRYFGEAGDRYRGQEVVIDESGDEPTIRYREDEES 240 (651) T ss_pred ChhheeeecccccccchhhhhhhcccccccchhHHHHHHHHHhcCcceEEEeeccccceeeeeccCCcceeEEeccCcce Confidence 998876543321000 0 0 Q ss_pred --------eeeEEEeecccCceEEEccceEEEeecCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHHccCCcceEEE Q lcl|Aclame:pro 153 --------KTKMWYVVNTGGQQRVLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQ 224 (429) Q Consensus 153 --------~~~~~~~~~~~g~~~~~~~~evih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~ 224 (429) .....+.....+....++++||||||.+++.++.+|+||+..+..++.++.++++++.++|+||++|+|+++ T Consensus 241 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~eViHir~~~~~~g~~G~spl~~a~~~i~~a~~a~~~~~~~f~NG~~p~gil~ 320 (651) T protein:vir:99 241 EREPIFVDRETGDVTTGDANGLENRPANELIFIPNPSILEDDYGVPDWVSAIRTISADEAAKDYNRDFFDNDTIPRMVIK 320 (651) T ss_pred eeeeecccceeeeEEEcCCCceeEecccceEEecCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEE Confidence 000011222333455688999999999888899999999999999999999999999999999999999999 Q ss_pred eCC-CCCHHHHHHHHHHHHHHhcccccccceeecCC-----------CceeEecCCCh-hHHHHHHHHHHHHHHHHHHhc Q lcl|Aclame:pro 225 YVG-DLNEDAKKVFRENFESMSSGLQNSHRIALMPV-----------GYQFQPISLNM-SDAQFLENTELTIRQIATAFG 291 (429) Q Consensus 225 ~~~-~~~~e~~~~~~~~~~~~~~g~~~~~~~~vl~~-----------g~~~~~~~~~~-~d~~~~e~~~~~~~~Ia~~fg 291 (429) +++ .+++++.+++++.|++.++ |+|+++||+. |++|++++.++ +|+||+|.+++++++||++|| T Consensus 321 ~~~~~ls~e~~~~lr~~~~~~~~---nagk~~vL~~~~~~~~~~~~~g~~~~pls~~~~~D~qfle~r~~~~~eIa~afg 397 (651) T protein:vir:99 321 VTGGELSEESKRDLRQMLNGLRE---ESHRAVVLEVEKFQSQLDEDVEIELEPMGQGISEEMDFRQFREKNEHEIAKVLE 397 (651) T ss_pred ecCCCCCHHHHHHHHHHHHHHhc---cCCceEEeecccccccccccCCceEEEcCcCchhhHHHHHHHHHHHHHHHHHhC Confidence 875 5899999999999998664 6788998865 99999999987 599999999999999999999 Q ss_pred CChhhcCCccccccccHHHHHHHHHHHHHhHHHHHHHHHHHHhhccchhhcch--hhhhhhhhhHhhhhHHHHHHHHHHH Q lcl|Aclame:pro 292 IKMHQLNDLSKATLNNIEQQQQQFYTDTLQATLTMYEQEMTYKLFLDSELDKG--FYSKFNVDAILRADIKTRYEAYRTG 369 (429) Q Consensus 292 vp~~~l~~~~~~~~~n~~~~~~~~~~~~l~P~~~~i~~~l~~~ll~~~~~~~~--~~~~fd~~~l~~~d~~~~~~~~~~~ 369 (429) |||.+||..+.+|++|++++.+.|+++||.|+++.|+++||++|++..+...+ ++++|+.+.+++.|.+++++.+..+ T Consensus 398 VPp~~lG~~~~~~~sn~E~~~~~f~~~tL~P~~~~ie~eln~kLl~~~e~~~~~~i~~ef~~~~llr~D~~~~~e~~~~~ 477 (651) T protein:vir:99 398 VPPVKIGVTDSANRSNSDQQDKDFALEVIQPEQHTFAEWLYQIIHQQALGVTDWTIEYELRGADQPKQEAQLAEQRVRAM 477 (651) T ss_pred CCHHHhccCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCccccccCceEEEEeccchhhhccHHHHHHHHHHH Confidence 99999999999999999999999999999999999999999999998776665 4667888889999999999999999 Q ss_pred HhCCCCCHHHHHHHhCCCCCC--CcceeeeccccccccccccccCCCCCCCCCC-CCCCCCCC Q lcl|Aclame:pro 370 IQGGFLKPNEARSKEDLPPEA--GGDRLLVNGNMLPIDMAGQAYLKGGDTNGEV-SKEGNEGN 429 (429) Q Consensus 370 ~~~g~~t~NE~R~~~Gl~~~~--~gD~~~~~~n~~~~~~~~~~~~~~g~~~~~~-~~~~~~~n 429 (429) +++|++|+||+|+++||||++ +||..+.+.+...++.. .+++++++.. +.+.++.. T Consensus 478 i~~G~~T~NE~R~~lglppi~~~~gd~~l~~~~~~~~g~~----~~gge~~~~~~~~~~~~~~ 536 (651) T protein:vir:99 478 RLAGVGLVDEAREELGLDPLGEPYGEMTLSEFEAEVAGDV----AGGGETEAVHEPPEENKIG 536 (651) T ss_pred HhCCCcCHHHHHHHhCCCCCCCcccccccccccccccccc----ccCCCCcccccCccccccc Confidence 999999999999999999995 58888877766554432 2333332221 11111111 No 88 >protein:vir:79772 Length: 648 # NCBI annotation: portal protein # Family: family:all:3222 # MgeID: mge:1874 # MgeName: 0305phi8-36 # Cross-refs: genbank:acc:YP_001429612;genbank:gi:156564103;genbank:GeneID:5525537 Probab=100.00 E-value=1.1e-66 Score=382.16 Aligned_cols=415 Identities=10% Similarity=0.038 Sum_probs=286.5 Q ss_pred Cchhhhhhcccccccccccc---------------c---------CCchHHH----------HHhhcCCCCc--ceech- Q lcl|Aclame:pro 1 MDSVKKFFNFEKRQTSQVIE---------------L---------NKDDEKL----------LEWLGISPST--ISVKG- 43 (429) Q Consensus 1 Mg~~~~~~~~~~~~~~~~~~---------------~---------~~~~~~~----------~~~~~~~~~~--~~~~~- 43 (429) -|+|+|+..+++.......+ + ...++.. ....+..... -+++. T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~d~~~~~~~r~g~~~~~~~~g~~~~~epp~d~~ 87 (648) T protein:vir:79 8 RGFWSRISLMWRDEDDDKEPLVLEESMQLGEAPGAMPKGGGGGGSAKRDPKMSLVKRIGLAIMDGGGGGRDFEEPEFDFN 87 (648) T ss_pred chhhhhhhhhccCccccccccccccccccCCCccccCCCCcccccccccchhHHHHHhHHHHHhhcCCccccccCCcCHH Confidence 57777776665532211100 0 0011111 1111111111 12222 Q ss_pred ---hhhhccHHHHHHHHHHHHhhccCceEEEecCCceeeeeecchhhhhhcccCcCCCCHHHHHHHHHHHHHhhCCeEEE Q lcl|Aclame:pro 44 ---KNALKVATVFACIKILSESVSKLPLKIYQEDEYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYAN 120 (429) Q Consensus 44 ---~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~~~~~~~~~~~~~l~~~PN~~~s~~~~~~~~~~~~l~~G~~~~~ 120 (429) +.+..+|.|++||++||++||+++|.++.+++.. ...++... +..+||++++.++||+.++.+++++||+|++ T Consensus 88 ~l~~l~~~np~V~~aI~iia~~ia~l~~~i~~~~~~~---~~~~~~~~-ll~rPn~~~t~~~f~~~l~~~lll~GNAYve 163 (648) T protein:vir:79 88 EITSAYNTEGYVRQAVDKYIEMMFKADWDFVSKNPNA---VEYIRMRF-TLMAEATQIPTNQLFIEIAEDLVKYCNVVIA 163 (648) T ss_pred HHHHHHhcChHHHHHHHHHHHHHhhCcceEEecCCcc---chhhHHHH-HhhccCCCCCHHHHHHHHHHHHHhcCCeEEE Confidence 2233589999999999999999999987765432 12233333 3458999999999999999999999999999 Q ss_pred EeeCCCCc---------------eEEEEeeCCcceEEEEcCCcceeeeeeEEEeecccCceEEEccceEEEeecCCCCCc Q lcl|Aclame:pro 121 IEFDRKGK---------------VQALWPIDASKVTVYIDDVGLLNSKTKMWYVVNTGGQQRVLKPEEILHFKNGITLDG 185 (429) Q Consensus 121 ~~~~~~g~---------------~~~l~~l~p~~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~evih~~~~~~~~~ 185 (429) ++|+..|. ..+|||++|.+|++..+.++.... +.|....++..+.|++++||||+.+++.++ T Consensus 164 iiRd~~G~~~~~l~~~~~~~~~~v~~l~pl~p~~v~v~~d~~g~~~~---Y~y~~~g~~~~~~~~~~dIIHik~~~~~d~ 240 (648) T protein:vir:79 164 KSRAKDALPFQGMNVMGVGDSMPVAGYFPLNLASMKVKRDKFGMIKG---WQQEQEGQDKPQKFKPEDIVHIYYKREKGR 240 (648) T ss_pred EEecCCCccchhhhhhhhccccceeeeEeecCceeEEEEcCCCceee---eEEEecCCceeEEecCccEEEEccCCCCCC Confidence 99998873 478999999999998876543221 122233445667899999999998888999 Q ss_pred ccccCHHHHHHHHHHHHHHHHHHHHHHHHccCCcceEEEeCC-CCCHHHHHHHHHHHHHHhcccccccceeecCCCceeE Q lcl|Aclame:pro 186 LVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVG-DLNEDAKKVFRENFESMSSGLQNSHRIALMPVGYQFQ 264 (429) Q Consensus 186 ~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~-~~~~e~~~~~~~~~~~~~~g~~~~~~~~vl~~g~~~~ 264 (429) .+|+||+.++..++.+..++.++..++|+||++|+|+++++. ...+++.++.++.|.+.+.+. .+.+++.++. T Consensus 241 ~~GlSpi~~a~~aI~l~~aa~~~~~~fF~NGa~P~gil~~~~~~~~~e~~k~~~e~~~~~~~~~------~i~gg~v~~~ 314 (648) T protein:vir:79 241 AFGTPWLLPALDDIRALRQVEENVLRLVYRNLHPLWHVKVGLEQEGFGAEEGEVDLVRGEVENM------DVEGGMVTTE 314 (648) T ss_pred ceeccHHHHHHHHHHHHHHHHHHHHHHHhccCCccEEEEeCCCccchHHHHHHHHHHHHhcccc------cccccccccc Confidence 999999999999999999999999999999999999999853 345666777777777766542 2333333443 Q ss_pred ecC----CChhHHHHHHHHHHHHHHHHHHhcCChhhcCCccccccccHHHHHHHHHHHHHhHHHHHHHHHHHHhh----c Q lcl|Aclame:pro 265 PIS----LNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKATLNNIEQQQQQFYTDTLQATLTMYEQEMTYKL----F 336 (429) Q Consensus 265 ~~~----~~~~d~~~~e~~~~~~~~Ia~~fgvp~~~l~~~~~~~~~n~~~~~~~~~~~~l~P~~~~i~~~l~~~l----l 336 (429) .+. .+++|+||++.+++++++||++|||||.+||..+.+++++.+++.. ++..++.|++..++..++.++ + T Consensus 315 ~~~i~~~~s~~dlqfle~rk~~~~eIa~aFgVPP~lLG~~~~ss~stae~~~~-~~~~~i~~l~~~i~~~le~~~~~~ll 393 (648) T protein:vir:79 315 RVNISSIASNQIIDAKEYLKHFEQRAFTVLGVSELMMGRGGTASRSTGDNLSS-DFKDRIKALQKVMATFINEFMVKEIL 393 (648) T ss_pred eeeccccCCHHHHHHHHHHHHHHHHHHHHhCCCHhHcccCCCccchHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHh Confidence 333 3668999999999999999999999999999888888888877655 456778888777766555433 2 Q ss_pred cchhh----cchhhhhhhhhhHhhhhHHHHHHHHHHHHhCCCCCHHHHHHHhCCCCCCCcce-eeeccccccccccc--- Q lcl|Aclame:pro 337 LDSEL----DKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEAGGDR-LLVNGNMLPIDMAG--- 408 (429) Q Consensus 337 ~~~~~----~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~Gl~~~~~gD~-~~~~~n~~~~~~~~--- 408 (429) ....+ ...++++|+++++++.|.+.+++.+.+++.+|+||+||+|+++||||+|+|+. .++..++.+..... T Consensus 394 ~e~~l~~~l~~d~~ieF~~~~Llr~D~~~~a~~~~~l~~~GilT~NEaR~~lGlpPi~~g~~~~~l~~~~~~~~~~~~~~ 473 (648) T protein:vir:79 394 MEGGFDPVLNPDDKVEFRFNEIDMDSKIKLENQAVFLYEHNAISEDEMRELIGRDPVDDGEGRAKMHLQMVTIAQATALA 473 (648) T ss_pred hhhhccccccccceEEEeecccchhhHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCCccccccccccchhccccc Confidence 22111 12356889999999999999999999999999999999999999999987653 34444443322111 Q ss_pred --cccCC-CCCCCCCCCCCCCCC-------C Q lcl|Aclame:pro 409 --QAYLK-GGDTNGEVSKEGNEG-------N 429 (429) Q Consensus 409 --~~~~~-~g~~~~~~~~~~~~~-------n 429 (429) .+..+ ++..+...+.+..|. | T Consensus 474 ~~~~~~~~~~~~~a~~eg~~~e~~~~~~~~~ 504 (648) T protein:vir:79 474 ALAPTPAGGSSASASGDKKKKATDNKTKPTN 504 (648) T ss_pred cCCCCCCCCCCCCccccccccccCCCCCCCC Confidence 01111 011111111111111 1 No 89 >protein:vir:78641 Length: 278 # NCBI annotation: portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:1855 # MgeName: tp310-2 # Cross-refs: genbank:acc:YP_001429941;genbank:gi:156603995;genbank:GeneID:5525387 Probab=100.00 E-value=1.5e-64 Score=370.57 Aligned_cols=278 Identities=20% Similarity=0.350 Sum_probs=255.8 Q ss_pred hccCceEEEecCCceeeeeecchhhhhhcccCcCCCCHHHHHHHHHHHHHhhCCeEEEEeeCCCCceEEEEeeCCcceEE Q lcl|Aclame:pro 63 VSKLPLKIYQEDEYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTV 142 (429) Q Consensus 63 ia~~~~~~~~~~~~~~~~~~~~~~~~~l~~~PN~~~s~~~~~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~l~p~~v~~ 142 (429) ||++|+++++.++++ .|+++++|+.+||++||+++||+.++.+++++||||++++++..|++.+|||++|++|++ T Consensus 1 ia~l~~~~~~~~~~~-----~~~l~~lL~~~PN~~~t~~~f~~~~~~~ll~~Gna~~~i~r~~~G~~~~l~~l~~~~v~v 75 (278) T protein:vir:78 1 MASLPLKMYEDYKVV-----NTEVSDLLTVSPNNSLSSFDFINQIETIRNEKGNAYVLIERDIYHQPSKLFLLNPDVVEM 75 (278) T ss_pred CccceeEEEecCccc-----ccHHHHHHHhcCCCCCCHHHHHHHHHHHHhhcCCEEEEEEECCCCcEEEEEEECCceeEE Confidence 999999999876543 589999999999999999999999999999999999999999999999999999999999 Q ss_pred EEcCCcceeeeeeEEEeecccCceEEEccceEEEeecCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHHccCCcceE Q lcl|Aclame:pro 143 YIDDVGLLNSKTKMWYVVNTGGQQRVLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGL 222 (429) Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~evih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~ 222 (429) ..+.++. ...+.....+|..+.|+++||||++++++.++.+|.||+.++...+....++.+++...+.+ .++++ T Consensus 76 ~~~~~~~----~~~y~~~~~~g~~~~~~~~evih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~~--~~~~i 149 (278) T protein:vir:78 76 LIENQSR----ELYYSIHAATGNKLIVHNMDMLHFKHIVASNMVQGISPIDVLKNTTDFDNAVRTFNLTEMQK--PDSFM 149 (278) T ss_pred EEcCCCc----eEEEEEEcCCceEEEEccccEEEECCCCCCCCeeeccHHHHHHHHHHHHHHHHHHHHHHhcC--CCcEE Confidence 8876543 22344455677888999999999999989999999999999999999999999987655554 57899 Q ss_pred EEeCCCCCHHHHHHHHHHHHHHhcccccccceeecCCCceeEecCCChhHHHHHHHHHHHHHHHHHHhcCChhhcCCccc Q lcl|Aclame:pro 223 VQYVGDLNEDAKKVFRENFESMSSGLQNSHRIALMPVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSK 302 (429) Q Consensus 223 ~~~~~~~~~e~~~~~~~~~~~~~~g~~~~~~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~fgvp~~~l~~~~~ 302 (429) ++.+..+++|+.++++++|++.+. ++|+++++++|++|+++++++.|++++|.+++++++||++|||||.+||..+. T Consensus 150 ~~~~~~l~~e~~~~~~~~~~~~~~---~~g~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgVpp~~lg~~~~ 226 (278) T protein:vir:78 150 LKYGSNVGKEKRQQVLEDFKQYYE---ENGGILFQEPGVEIEPLPKKYVSEDIVASENLTRERVANVFQLPSVFLNARSN 226 (278) T ss_pred EEeCCCCCHHHHHHHHHHHHHHhc---cCCCceecCCCceEEEccCChhHHHHHHHHHHHHHHHHHHhCCCHHHhCCCCC Confidence 999999999999999999998764 56889999999999999999999999999999999999999999999999999 Q ss_pred cccccHHHHHHHHHHHHHhHHHHHHHHHHHHhhccchhhcchhhhhhhhhhH Q lcl|Aclame:pro 303 ATLNNIEQQQQQFYTDTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAI 354 (429) Q Consensus 303 ~~~~n~~~~~~~~~~~~l~P~~~~i~~~l~~~ll~~~~~~~~~~~~fd~~~l 354 (429) ++++|.+++.++|++.||+|+++.|+++||++||++.++..|++++||++.| T Consensus 227 ~~~sn~~~~~~~~~~~~l~P~~~~i~~~ln~~L~~~~e~~~g~~~~f~~~~l 278 (278) T protein:vir:78 227 TNFAKNEELNRFYLQHTLLPIVKQYEEEFNRKLLTKTDREKIGILNLTLNLI 278 (278) T ss_pred CCcccHHHHHHHHHHHHHHHHHHHHHHHHHhhcCChhHhcCCceEEEecccC Confidence 9999999999999999999999999999999999999999999999999998 No 90 >protein:vir:79150 Length: 368 # NCBI annotation: bacteriophage gpQ # Family: family:all:196 # MgeID: mge:1863 # MgeName: RSA1 # Cross-refs: genbank:acc:YP_001165254;genbank:gi:145708079;genbank:GeneID:5247161 Probab=100.00 E-value=1.8e-56 Score=326.21 Aligned_cols=341 Identities=13% Similarity=0.101 Sum_probs=254.0 Q ss_pred Cchhhhhhc-ccccccccccccCCch-------HHHHH-hhcCCCCcc---------eech-hhhhccHHHHHHHHHHHH Q lcl|Aclame:pro 1 MDSVKKFFN-FEKRQTSQVIELNKDD-------EKLLE-WLGISPSTI---------SVKG-KNALKVATVFACIKILSE 61 (429) Q Consensus 1 Mg~~~~~~~-~~~~~~~~~~~~~~~~-------~~~~~-~~~~~~~~~---------~~~~-~~a~~~~~v~~~i~~ia~ 61 (429) |+--.+--. ..++....+....... ..... .||..-... .+.. ...++.|.-+.|+..+.+ T Consensus 1 m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fg~p~~~~~~~~~~~~~~~~~~~~~~~~pi~~~~la~~~~ 80 (368) T protein:vir:79 1 MSRNKTRRAARAASAHVRTANTDAPTEHHTDRAAQAEVFSFGDPVEVLDRRELLDYVECMRMGQWYEPPMPWDGLARSFR 80 (368) T ss_pred CCccccccchhccCcccccccccCcchhhccccCceEEEEcCCceeecchhhHHHHHHHHhccchhccCcCHHHHHHHHh Confidence 776543111 0000000000000000 00000 011110000 0000 123344444555544443 Q ss_pred hhccCceEEEecCCceeeeeecchhhhhhcccCcCCCCHHHHHHHHHHHHHhhCCeEEEEeeCCCCceEEEEeeCCcceE Q lcl|Aclame:pro 62 SVSKLPLKIYQEDEYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVT 141 (429) Q Consensus 62 ~ia~~~~~~~~~~~~~~~~~~~~~~~~~l~~~PN~~~s~~~~~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~l~p~~v~ 141 (429) .-+. .+......|+++.++ .+||++||+++|++ ++.+++++||+|++++++..|++.+|+|++|.+|+ T Consensus 81 ~~~~----------h~~~~~~~~n~l~l~-~~Pn~~~t~~~f~~-l~~d~ll~Gnay~~~~r~~~G~~~~L~~l~~~~v~ 148 (368) T protein:vir:79 81 AAAH----------HSSAVYVKRNILVST-FIPHPLLSRATFER-LVLDWQVFGNAYLERRENVLGGTIRLDTPLAKYVR 148 (368) T ss_pred hccc----------cchhhhhhcchhhhh-cCCCcCCCHHHHHH-HHHHHhhcCCeEEEEEEcCCCCEEEEEEeCcccce Confidence 3221 122233447777665 58999999999976 68899999999999999999999999999999998 Q ss_pred EEEcCCcceeeeeeEEEeecccCceEEEccceEEEeecCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHHccCCcce Q lcl|Aclame:pro 142 VYIDDVGLLNSKTKMWYVVNTGGQQRVLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKG 221 (429) Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~evih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~ 221 (429) +..+.+ .++++..++..++|++++|||||.+++.++.+|+||+.++...+.+..++..+..++|+||++|+| T Consensus 149 ~~~~~~--------~~~~~~~~~~~~~~~~~dIihir~~~~~~~~yGlsp~~~a~~si~l~~aa~~~~~~~~~NGa~~~g 220 (368) T protein:vir:79 149 RGLDLN--------TYFFVQNWQQPYTFAAGSVFHLQEPDINQEVYGLPEYLSALNATWLNESATLFRRRYYKNGSHAGF 220 (368) T ss_pred eeccCC--------EEEEEecCCeEEEEccccEEEecCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhccCCCce Confidence 765542 234455678888999999999999999999999999999999999999999999999999999999 Q ss_pred EEEeC-CCCCHHHHHHHHHHHHHHhcccccccceeec-----CCCceeEecCCChhHHHHHHHHHHHHHHHHHHhcCChh Q lcl|Aclame:pro 222 LVQYV-GDLNEDAKKVFRENFESMSSGLQNSHRIALM-----PVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMH 295 (429) Q Consensus 222 ~~~~~-~~~~~e~~~~~~~~~~~~~~g~~~~~~~~vl-----~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~fgvp~~ 295 (429) ++.++ ..+++|+.+++++.|++ +.|..|+|+++|+ ++|++|++++.+++|+||+|.+++++++||++|||||. T Consensus 221 il~~~~~~l~~e~~~~lk~~~~~-~~G~~N~g~~~vl~~~g~~~g~~~~pls~~~~d~qf~e~k~~~~~eIa~af~VPp~ 299 (368) T protein:vir:79 221 ILYMTDAAQKQEDVDTLREAMKS-AKGPGNFRNLFMYAPNGKKDGIQLLPVSEVAAKDEFWNIKNVTRDDQLAAHRVPPQ 299 (368) T ss_pred EEEeCCCCCCHHHHHHHHHHHHH-hcCCcccCceeEecCCCCccceeEEEcCCCHHHHHHHHHHHHhHHHHHHHhCCCHH Confidence 99876 46899999999999987 6788999999998 68999999999999999999999999999999999999 Q ss_pred hcCCcccc--ccccHHHHHHHHHHHHHhHHHHHHHHHHHHhhccchhhcchhhhhhhhhhHhhhhHHHHHHHHHHHHhC Q lcl|Aclame:pro 296 QLNDLSKA--TLNNIEQQQQQFYTDTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAILRADIKTRYEAYRTGIQG 372 (429) Q Consensus 296 ~l~~~~~~--~~~n~~~~~~~~~~~~l~P~~~~i~~~l~~~ll~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~ 372 (429) +||..+.+ +++|++++.+.|++++|.|+++.|+ +++.++.. .+++|+...|++.|.+.++.....- + T Consensus 300 llGi~~~~t~~~sn~e~~~~~f~~~~l~Pl~~~ie-~ln~~l~~-------e~~rF~~~~l~~~D~~a~a~~~~rs--a 368 (368) T protein:vir:79 300 LMGIIPNNTGGFGDVEKAAMVFARNEVKPLQDRLL-AINDWIGD-------EVVRFAPYALGGHDQPAAAPGGQRS--A 368 (368) T ss_pred HccccCCCCCccccHHHHHHHHHHHHHHHHHHHHH-HHHhccCc-------ceeeechhHhhcccccccCCccccc--C Confidence 99976554 5899999999999999999999998 57776532 2588999999999988877632221 1 No 91 >protein:vir:103971 Length: 376 # NCBI annotation: pbsx family phage portal protein # Family: family:all:196 # MgeID: mge:1665 # MgeName: phi52237 # Cross-refs: genbank:acc:YP_293752;genbank:gi:72537722;genbank:GeneID:3608098 Probab=100.00 E-value=4.4e-54 Score=313.13 Aligned_cols=318 Identities=14% Similarity=0.153 Sum_probs=244.4 Q ss_pred Cchhhhhhccccc--------cc--ccccccC-------CchHHHHHhhcCCC----Ccceechhhh----hccHHHHHH Q lcl|Aclame:pro 1 MDSVKKFFNFEKR--------QT--SQVIELN-------KDDEKLLEWLGISP----STISVKGKNA----LKVATVFAC 55 (429) Q Consensus 1 Mg~~~~~~~~~~~--------~~--~~~~~~~-------~~~~~~~~~~~~~~----~~~~~~~~~a----~~~~~v~~~ 55 (429) |+.-++..+.... .. .....++ .+...+.+..+... ..-+++.... -.++.+.+| T Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~fg~p~~v~~~~~~~~~~~~~~~~~~~~pp~~~~~La~~~~~~~~h~s~ 105 (376) T protein:vir:10 26 MSKRRSRAPRTFAAAPNPSAGSAAPARAEVFTFDDPTPVMNRAEILDYVECWSNGEWFEPPVSFAGLAKSFRASTHHSSA 105 (376) T ss_pred chhccCCCcccchhhhhHhhhccCcceeEEEEcCCceeccCcchhhhhhhhhhcCceecCCCCHHHHHHHHhhhHHhhhh Confidence 6654332110000 00 0000001 01111111111111 1112322211 124455556 Q ss_pred HHHHHHhhccCceEEEecCCceeeeeecchhhhhhcccCcCCCCHHHHHHHHHHHHHhhCCeEEEEeeCCCCceEEEEee Q lcl|Aclame:pro 56 IKILSESVSKLPLKIYQEDEYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPI 135 (429) Q Consensus 56 i~~ia~~ia~~~~~~~~~~~~~~~~~~~~~~~~~l~~~PN~~~s~~~~~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~l 135 (429) |...++.+++ ..+||+.+|+.+|++. +.+++++||+|++++++..|++.+|+|+ T Consensus 106 l~~k~n~l~~-------------------------~~~Pnp~lT~~~f~~~-v~d~ll~Gnay~~~~rn~~G~~~~L~pl 159 (376) T protein:vir:10 106 LFFKANVLAS-------------------------TFRPHRWLSRHAFERW-ALDFLTFGNGYLERRRNMVGGTLRLEPA 159 (376) T ss_pred HHHHhHHHHh-------------------------ccCCCCCCCHHHHHHH-HHHHHhcCCeEEEEEECCCCCEEEEEEe Confidence 5554443332 2379999999999855 6799999999999999999999999999 Q ss_pred CCcceEEEEcCCcceeeeeeEEEeecccCceEEEccceEEEeecCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHHc Q lcl|Aclame:pro 136 DASKVTVYIDDVGLLNSKTKMWYVVNTGGQQRVLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQ 215 (429) Q Consensus 136 ~p~~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~evih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~n 215 (429) +|.+|++..+.+. ++++..++....|+++|||||+.+++.++.+|+||+.++...+.+..++..+..++|+| T Consensus 160 ~~~~vr~~~d~~~--------~~~~~~~~~~~~~~~~eViHir~~~~~~~~yGls~~~~a~~si~l~~aa~~f~~~~f~N 231 (376) T protein:vir:10 160 LAKYVRRKADFNG--------FVYVNGWQERHEFEPDSVFQLVRPDINQEVYGLPEYLSSLHSAWLNESSTLFRRKYYEN 231 (376) T ss_pred CCcceEEEeeCCe--------EEEEEcCCeEEEEccccEEEecCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhc Confidence 9999998776542 34445567788999999999999998999999999999999999999999999999999 Q ss_pred cCCcceEEEeC-CCCCHHHHHHHHHHHHHHhcccccccceeec-----CCCceeEecCCChhHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 216 GLQVKGLVQYV-GDLNEDAKKVFRENFESMSSGLQNSHRIALM-----PVGYQFQPISLNMSDAQFLENTELTIRQIATA 289 (429) Q Consensus 216 g~~~~~~~~~~-~~~~~e~~~~~~~~~~~~~~g~~~~~~~~vl-----~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~ 289 (429) |++|+|++..+ ..+++|+.++++++|++ +.|..|+++++++ ++|++|++++.+++|+||+|.+++++++||++ T Consensus 232 Ga~pggIl~~~d~~l~~e~~~~lr~~~~~-~~G~~N~~~~~vl~~~g~~~Gi~~~pls~~~~d~qf~e~k~~~~~eIa~a 310 (376) T protein:vir:10 232 GSHAGFILYMTDAAQKQDDVDNMRDALKN-AKGPGNFRNVFMYAPGGKKDGIQLIPVSEVAAKDEFFNIKNVTRDDLLAA 310 (376) T ss_pred cCCCceEEEecCCCCCHHHHHHHHHHHHH-hcCccccCceeEecCCCCccceEEEEccCCHHHHHHHHHHHHhHHHHHHH Confidence 99999999876 47899999999999987 6788899999998 57999999999999999999999999999999 Q ss_pred hcCChhhcCCccc--cccccHHHHHHHHHHHHHhHHHHHHHHHHHHhhccchhhcchhhhhhhhhhHhhhhHHH Q lcl|Aclame:pro 290 FGIKMHQLNDLSK--ATLNNIEQQQQQFYTDTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAILRADIKT 361 (429) Q Consensus 290 fgvp~~~l~~~~~--~~~~n~~~~~~~~~~~~l~P~~~~i~~~l~~~ll~~~~~~~~~~~~fd~~~l~~~d~~~ 361 (429) |||||.++|..+. ++++|.+++.+.|++++|.|+++.|++ +|.++.. .+++|+...|++.|.+. T Consensus 311 f~VPp~llGi~~~~t~~~sn~eq~~~~f~~~~L~Pl~~~iee-ln~~L~~-------~~~~F~~~~Llr~d~ka 376 (376) T protein:vir:10 311 HRVPPQLLGIVPSNSGGFGTPDTAARVFGRNEIRPLQARFAE-LNDWLGE-------EVVRFDDYEIPPAPVAA 376 (376) T ss_pred hCCCHHHhcccCCCCCCcccHHHHHHHHHHHHHHHHHHHHHH-HHhhccc-------cccccChhHhhcccccC Confidence 9999999997654 468999999999999999999999984 8876532 25899999999999887 No 92 >protein:vir:267 Length: 348 # NCBI annotation: putative capsid portal protein # Family: family:all:196 # MgeID: mge:7 # MgeName: K139 # Cross-refs: genbank:acc:NP_536647;genbank:gi:17975125;genbank:GeneID:929081 Probab=100.00 E-value=9.4e-54 Score=311.29 Aligned_cols=322 Identities=13% Similarity=0.075 Sum_probs=242.5 Q ss_pred Cchhhh-hhcccccccccccccC------CchHHHHH----hhcC--CCCcceechhhh---h-ccHHHHHHHHHHHHhh Q lcl|Aclame:pro 1 MDSVKK-FFNFEKRQTSQVIELN------KDDEKLLE----WLGI--SPSTISVKGKNA---L-KVATVFACIKILSESV 63 (429) Q Consensus 1 Mg~~~~-~~~~~~~~~~~~~~~~------~~~~~~~~----~~~~--~~~~~~~~~~~a---~-~~~~v~~~i~~ia~~i 63 (429) |.-=.. .-......+....++. .+...+.+ |... ....-+++.... + .++.+.+||....+.+ T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~epp~~~~~La~l~~~n~~h~~~i~~k~N~l 80 (348) T protein:vir:26 1 MTEQLIHSHTTDGTESKSVYSFDPNPEPVDTNSWMTRYCELFYNDFDDYWEPPISLKGLAEIANANGYHGSLLKARANYV 80 (348) T ss_pred CCccccchhhccccCCceEEEecCCCeeecCcchHHHHHHHHhcCCCccccCCCCHHHHHHHHhhhhhhhhhHhhhhhHH Confidence 432100 0000000000111111 01112222 2211 111113333221 1 3566677776665544 Q ss_pred ccCceEEEecCCceeeeeecchhhhhhcccCcCCCCHHHHHHHHHHHHHhhCCeEEEEeeCCCCceEEEEeeCCcceEEE Q lcl|Aclame:pro 64 SKLPLKIYQEDEYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVY 143 (429) Q Consensus 64 a~~~~~~~~~~~~~~~~~~~~~~~~~l~~~PN~~~s~~~~~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~l~p~~v~~~ 143 (429) ++ ..+||+.+|+.+|++. +.+++++||||++++|+..|++.+|+|++|.+|++. T Consensus 81 ~~-------------------------~~~Pn~~~t~~~f~~~-~~d~ll~Gnay~~~~rn~~G~~~~L~~l~~~~v~~~ 134 (348) T protein:vir:26 81 AG-------------------------RFMNGGGLPMYKMNSA-CWDYFGLGMSAFVKIRSYLKNVIALEPLPMVHMRKR 134 (348) T ss_pred hh-------------------------cccCCCCCCHHHHHHH-HHHHHhcCCeEEEEEEcCCCcEEEEEEecCceeEee Confidence 43 1369999999999775 579999999999999999999999999999999986 Q ss_pred EcCCcceeeeeeEEEeecccCceEEEccceEEEeecCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHHccCCcceEE Q lcl|Aclame:pro 144 IDDVGLLNSKTKMWYVVNTGGQQRVLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLV 223 (429) Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~evih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~ 223 (429) .+++ +|.+..+|..+.|++++||||+.+++.++.+|+||+.++.+.+.+..++..+..++|+||++|+||+ T Consensus 135 ~d~~---------~~~~~~~g~~~~f~~~dIiHir~~~~~~~~~Gls~~~~a~~si~l~~~a~~~~~~~f~NGa~pg~Il 205 (348) T protein:vir:26 135 KNGD---------FVQLLRNNEQKVFKAKDVIFIPQYDPQQQIYGLPDYLGSIQSSLLNRDATLFRRRYYLNGAHMGFIF 205 (348) T ss_pred ecCc---------EEEEEecCeEEEEcCccEEEEcCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEE Confidence 5532 3445567888899999999999998899999999999999999999999999999999999999999 Q ss_pred EeC-CCCCHHHHHHHHHHHHHHhcccccccceeec-----CCCceeEecCCChhHHHHHHHHHHHHHHHHHHhcCChhhc Q lcl|Aclame:pro 224 QYV-GDLNEDAKKVFRENFESMSSGLQNSHRIALM-----PVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQL 297 (429) Q Consensus 224 ~~~-~~~~~e~~~~~~~~~~~~~~g~~~~~~~~vl-----~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~fgvp~~~l 297 (429) ..+ ..+++|+.++++++|++. .|..|.++++++ ++|++++|++.+++|+||+|.+++++++||++|||||.++ T Consensus 206 ~~~~~~ls~e~~~~lk~~~~~~-~G~~n~~~~~vl~~~g~~~Gi~~~pis~~~~d~qf~e~k~~t~~dIa~af~VPp~ll 284 (348) T protein:vir:26 206 YATDPNLSEADEKALKEKIASS-KGIGNFRSMFVNIPNGKEKGIQLIPVGDIATKDEFERIKNITAQDIFVGHRFPAGMG 284 (348) T ss_pred EecCCCCCHHHHHHHHHHHHHh-cCcccccceeEEcCCCCccceeEEEccCChhHHHHHHHHHhhHHHHHHHhCCCHHHc Confidence 865 468999999999999986 577899999998 7899999999999999999999999999999999999999 Q ss_pred CCc--cccccccHHHHHHHHHHHHHhHHHHHHHHHHHHhhccchhhcchhhhhhhhhhH-hhhhHHHH Q lcl|Aclame:pro 298 NDL--SKATLNNIEQQQQQFYTDTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAI-LRADIKTR 362 (429) Q Consensus 298 ~~~--~~~~~~n~~~~~~~~~~~~l~P~~~~i~~~l~~~ll~~~~~~~~~~~~fd~~~l-~~~d~~~~ 362 (429) |.. ..++++|.+++.+.|++++|.|+++.|+++||++++.+ .+.+++||++.. .+.+..+. T Consensus 285 Gi~~~~~~~~sn~e~~~~~f~~~~l~P~~~~ie~~ln~~l~~~----~~~~~~fdl~~~~e~~~~~a~ 348 (348) T protein:vir:26 285 GMLPQQGANVPDPLKVSQVYDFYEVIPVCKRFMDAVNNDPEIP----DNLKLKFNLNPGVESANGSAV 348 (348) T ss_pred cccCCCCCccccHHHHHHHHHHHHHHHHHHHHHHHHhhhhCCC----CccEEEEecCcccccchhhcC Confidence 864 34689999999999999999999999999999987644 345677776633 22222221 No 93 >protein:vir:79207 Length: 351 # NCBI annotation: gp5, phage portal protein, pbsx family # Family: family:all:196 # MgeID: mge:1866 # MgeName: phiE202 # Cross-refs: genbank:acc:YP_001111036;genbank:gi:134288763;genbank:GeneID:4960726 Probab=100.00 E-value=2.6e-53 Score=308.90 Aligned_cols=318 Identities=14% Similarity=0.151 Sum_probs=241.1 Q ss_pred Cchhhhhhccccccc----------ccccccCC-------chHHHHHhhcCCCCcc----eechhhh----hccHHHHHH Q lcl|Aclame:pro 1 MDSVKKFFNFEKRQT----------SQVIELNK-------DDEKLLEWLGISPSTI----SVKGKNA----LKVATVFAC 55 (429) Q Consensus 1 Mg~~~~~~~~~~~~~----------~~~~~~~~-------~~~~~~~~~~~~~~~~----~~~~~~a----~~~~~v~~~ 55 (429) |+--++-.+....+. .....++. +...+.+.+.....+. +++.... -.++.+.+| T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~~pp~~~~~la~~~~~~~~h~~~ 80 (351) T protein:vir:79 1 MSKRRSRAPRTFAAAPNPSAGSAAPARAEVFTFDDPTPVMNRAEILDYVECWSNGEWFEPPVSFAGLAKSFRASTHHSSA 80 (351) T ss_pred CCCCCCCCCCCCCCCCchhhhhcccceeEEEEcCCceeecCcchhhhhhhhhhcCceecCCCCHHHHHHHHhhhHhhhhh Confidence 665432111000000 00000000 0011111111111111 1222111 113344444 Q ss_pred HHHHHHhhccCceEEEecCCceeeeeecchhhhhhcccCcCCCCHHHHHHHHHHHHHhhCCeEEEEeeCCCCceEEEEee Q lcl|Aclame:pro 56 IKILSESVSKLPLKIYQEDEYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPI 135 (429) Q Consensus 56 i~~ia~~ia~~~~~~~~~~~~~~~~~~~~~~~~~l~~~PN~~~s~~~~~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~l 135 (429) |...++.+++ ..+||+.+|..+|++ ++.+++++||+|++++++..|++.+|+|+ T Consensus 81 l~~k~n~l~~-------------------------~~~Pnp~~t~~~f~~-~v~d~ll~Gnay~~~~r~~~G~~~~L~~l 134 (351) T protein:vir:79 81 LFFKANVLAS-------------------------TFRPHRWLSRHAFER-WALDFLTFGNGYLERRRNMVGGTLRLEPA 134 (351) T ss_pred hhhhhhHHhh-------------------------cccCCCCCCHHHHHH-HHHHHHhcCCeEEEEEECCCCCEEEEEEe Confidence 4333322222 247999999999975 67899999999999999999999999999 Q ss_pred CCcceEEEEcCCcceeeeeeEEEeecccCceEEEccceEEEeecCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHHc Q lcl|Aclame:pro 136 DASKVTVYIDDVGLLNSKTKMWYVVNTGGQQRVLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQ 215 (429) Q Consensus 136 ~p~~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~evih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~n 215 (429) +|.+|++..+.+ .++++..+|....|+++||||||.+++.++.+|+||+.++...+.+..++..+..++|+| T Consensus 135 ~~~~v~~~~~~~--------~~~~~~~~g~~~~~~~~eIihir~~~~~~~~yGl~~~~~a~~si~l~~~a~~~~~~~f~N 206 (351) T protein:vir:79 135 LAKYVRRKADFS--------GFVYVNGWQERHEFEPDSVFQLVRPDINQEVYGLPEYLSSLHSAWLNESSTLFRRKYYEN 206 (351) T ss_pred CCcceeeeecCC--------eEEEEecCceEEEEcCccEEEeCCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhc Confidence 999999876654 245556778888999999999999999999999999999999999999999999999999 Q ss_pred cCCcceEEEeC-CCCCHHHHHHHHHHHHHHhcccccccceeec-----CCCceeEecCCChhHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 216 GLQVKGLVQYV-GDLNEDAKKVFRENFESMSSGLQNSHRIALM-----PVGYQFQPISLNMSDAQFLENTELTIRQIATA 289 (429) Q Consensus 216 g~~~~~~~~~~-~~~~~e~~~~~~~~~~~~~~g~~~~~~~~vl-----~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~ 289 (429) |++|+|++..+ ..+++++.++++++|++ ..|..|+++++++ ++|++|+|++.+++|+||+|.+++++++||++ T Consensus 207 Ga~pg~il~~~~~~ls~e~~~~lk~~~~~-~~G~~N~~~~~v~~~~g~~~gi~~~pl~~~~~d~ef~e~k~~s~~eI~~a 285 (351) T protein:vir:79 207 GSHAGFILYMTDAAQKQDDVDNMRDALKN-AKGPGNFRNVFMYAPGGKKDGIQLIPVSEVAAKDEFFNIKNVTRDDLLAA 285 (351) T ss_pred cCCCceEEEecCCCCCHHHHHHHHHHHHH-hcCccccCceeEecCCCCccceEEEEcCCChhHHHHHHHHHHhHHHHHHH Confidence 99999999876 46899999999999986 5788899999988 58999999999999999999999999999999 Q ss_pred hcCChhhcCCccc--cccccHHHHHHHHHHHHHhHHHHHHHHHHHHhhccchhhcchhhhhhhhhhHhhhhHHH Q lcl|Aclame:pro 290 FGIKMHQLNDLSK--ATLNNIEQQQQQFYTDTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAILRADIKT 361 (429) Q Consensus 290 fgvp~~~l~~~~~--~~~~n~~~~~~~~~~~~l~P~~~~i~~~l~~~ll~~~~~~~~~~~~fd~~~l~~~d~~~ 361 (429) |||||.++|..+. ++++|.+++.+.|++++|.|+++.|++ +|.++. . ..++||...|++.|.+. T Consensus 286 ~~VPp~llGi~~~~t~~~~n~e~~~~~f~~~~l~Pl~~~ie~-ln~~lg-~------~~~~F~~~~llr~d~~a 351 (351) T protein:vir:79 286 HRVPPQLLGIVPSNSGGFGTPDTAARVFGRNEIRPLQARFAE-LNDWLG-D------EVVTFDDYEIPPAPVAA 351 (351) T ss_pred hCCCHHHhcccCCCCCCcccHHHHHHHHHHHHHHHHHHHHHH-HHhhcC-c------ceeeeChhhhccccccC Confidence 9999999997654 568999999999999999999999985 776542 1 25899999999999877 No 94 >protein:vir:78191 Length: 351 # NCBI annotation: gp5, phage portal protein, pbsx family # Family: family:all:196 # MgeID: mge:1848 # MgeName: phiE12-2 # Cross-refs: genbank:acc:YP_001111155;genbank:gi:134288732;genbank:GeneID:4960651 Probab=100.00 E-value=4.5e-53 Score=307.58 Aligned_cols=318 Identities=14% Similarity=0.163 Sum_probs=240.7 Q ss_pred Cchhhhhhccccccc----------ccccccCC-------chHHHHHhhcCCCCcc----eechhhh----hccHHHHHH Q lcl|Aclame:pro 1 MDSVKKFFNFEKRQT----------SQVIELNK-------DDEKLLEWLGISPSTI----SVKGKNA----LKVATVFAC 55 (429) Q Consensus 1 Mg~~~~~~~~~~~~~----------~~~~~~~~-------~~~~~~~~~~~~~~~~----~~~~~~a----~~~~~v~~~ 55 (429) |+--++-.+....+. .....++. +...+.+.++....+. +++.... -.++.+.+| T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~~pp~~~~~la~~~~~~~~h~~~ 80 (351) T protein:vir:78 1 MSKRRSRAPRTFAAAPNPSAGSAAPARAEVFTFDDPTPVMNRAEILDYVECWSNGEWFEPPVSFAGLAKSFRASTHHSSA 80 (351) T ss_pred CCCCCCCCCCCCCCCCchhhhhcccceeEEEEcCCceeecCcchhhhhhhhhccCceecCCCCHHHHHHHHhhhHhhhhh Confidence 665432111000000 00000000 0011111111111111 1222111 113334444 Q ss_pred HHHHHHhhccCceEEEecCCceeeeeecchhhhhhcccCcCCCCHHHHHHHHHHHHHhhCCeEEEEeeCCCCceEEEEee Q lcl|Aclame:pro 56 IKILSESVSKLPLKIYQEDEYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPI 135 (429) Q Consensus 56 i~~ia~~ia~~~~~~~~~~~~~~~~~~~~~~~~~l~~~PN~~~s~~~~~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~l 135 (429) |...++.+++ ..+||+.||.++|++ ++.+++++||+|++++++..|++.+|+|+ T Consensus 81 l~~k~n~l~~-------------------------~~~Pn~~~t~~~f~~-~~~d~ll~Gnay~~~~rn~~G~~~~L~pl 134 (351) T protein:vir:78 81 LFFKANVLAS-------------------------TFRPHRWLSRHAFER-WALDFLTFGNGYLERRRNMVGGTLRLEPA 134 (351) T ss_pred hhhhhhHHhh-------------------------cccCCCCCCHHHHHH-HHHHHHhcCCeEEEEEECCCCCEEEEEEe Confidence 4333332222 237999999999975 56799999999999999999999999999 Q ss_pred CCcceEEEEcCCcceeeeeeEEEeecccCceEEEccceEEEeecCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHHc Q lcl|Aclame:pro 136 DASKVTVYIDDVGLLNSKTKMWYVVNTGGQQRVLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQ 215 (429) Q Consensus 136 ~p~~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~evih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~n 215 (429) +|.+|++..+.+. ++++..+|..+.|+++|||||+.+++.++.+|+|++.++...+.+..++..+..++|+| T Consensus 135 ~~~~v~~~~~~~~--------~~~~~~~~~~~~~~~~eVihir~~~~~~~~yGl~~~~~a~~si~l~~~a~~~~~~~f~N 206 (351) T protein:vir:78 135 LAKYVRRKADFSG--------FVYVNGWQERHEFAPDSVFQLVRPDINQEVYGLPEYLSSLHSAWLNESSTLFRRKYYEN 206 (351) T ss_pred cCcceEEeeeCCe--------EEEEecCCeEEEEccccEEEEcCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhc Confidence 9999998776542 34445567788999999999999999999999999999999999999999999999999 Q ss_pred cCCcceEEEeC-CCCCHHHHHHHHHHHHHHhcccccccceeec-----CCCceeEecCCChhHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 216 GLQVKGLVQYV-GDLNEDAKKVFRENFESMSSGLQNSHRIALM-----PVGYQFQPISLNMSDAQFLENTELTIRQIATA 289 (429) Q Consensus 216 g~~~~~~~~~~-~~~~~e~~~~~~~~~~~~~~g~~~~~~~~vl-----~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~ 289 (429) |++|+|++..+ ..+++|+.++++++|++ ..|..|+++++|+ ++|++|+|++.+++|+||+|.+++++++||++ T Consensus 207 Ga~pggIl~~~~~~ls~e~~~~lr~~~~~-~~G~~N~~~~~v~~~~g~~~g~k~~pls~~~~d~qf~e~k~~~~~eIa~a 285 (351) T protein:vir:78 207 GSHAGFILYMTDAAQKQDDVDNMRDALKN-AKGPGNFRNVFMYAPGGKKDGIQLIPVSEVAAKDEFFNIKNVTRDDLLAA 285 (351) T ss_pred cCCCceEEEecCCCCCHHHHHHHHHHHHH-hcCcccccceeeecCCCCccceeEEEcCCChhHHHHHHHHHHhHHHHHHH Confidence 99999999876 46899999999999986 5788999999988 57999999999999999999999999999999 Q ss_pred hcCChhhcCCccc--cccccHHHHHHHHHHHHHhHHHHHHHHHHHHhhccchhhcchhhhhhhhhhHhhhhHHH Q lcl|Aclame:pro 290 FGIKMHQLNDLSK--ATLNNIEQQQQQFYTDTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAILRADIKT 361 (429) Q Consensus 290 fgvp~~~l~~~~~--~~~~n~~~~~~~~~~~~l~P~~~~i~~~l~~~ll~~~~~~~~~~~~fd~~~l~~~d~~~ 361 (429) |||||.++|..+. ++++|.+++.+.|++++|.|+++.|++ ++.++. . .+++||...|++.|.+. T Consensus 286 ~~VPp~llGi~~~~t~~~sn~e~~~~~f~~~~l~P~~~~iee-~n~~l~-~------~~~~F~~~~Llr~d~ka 351 (351) T protein:vir:78 286 HRVPPQLLGIVPSNSGGFGTPDTAARVFGRNEIRPLQARFAE-LNDWLG-D------EVVRFDDYEIPPAPVAA 351 (351) T ss_pred hCCCHHHhcccCCCCCCcccHHHHHHHHHHHHHHHHHHHHHH-HHhhcC-c------cceecChhhhccccccC Confidence 9999999997654 468999999999999999999999995 666542 2 25899999999999887 No 95 >protein:vir:98567 Length: 340 # NCBI annotation: gp1 # Family: family:all:196 # MgeID: mge:1533 # MgeName: PSP3 # Cross-refs: genbank:acc:NP_958056;genbank:gi:41057353;genbank:GeneID:2744238 Probab=100.00 E-value=4.6e-53 Score=307.50 Aligned_cols=321 Identities=14% Similarity=0.253 Sum_probs=237.9 Q ss_pred Cchhhhhhcccccccc--cccccCCch-------HHHHHhhcCCCCcceechhhhhccHHHHHHHHHHHHhhccC--ceE Q lcl|Aclame:pro 1 MDSVKKFFNFEKRQTS--QVIELNKDD-------EKLLEWLGISPSTISVKGKNALKVATVFACIKILSESVSKL--PLK 69 (429) Q Consensus 1 Mg~~~~~~~~~~~~~~--~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~--~~~ 69 (429) |+--++........+. ....++.+. ..+.+.++. ...+.+++.|.-+.++..+.++-+.. +++ T Consensus 1 m~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~------~~~~~~~~pp~~~~~la~l~~a~~~h~s~i~ 74 (340) T protein:vir:98 1 MSKRKPRKAVAMTASAPQKMEAFTFGEPVPVLDKRDILDYVEC------ISNGKWYEPPVSFSGLAKSLRSAVHHSSPIY 74 (340) T ss_pred CCCCCCCccccccccCccceeEEEcCCceeecCcchhhhhhhh------hhcCceecCCCCHHHHHHHHHhccccchhhh Confidence 6632211100000000 000001100 011111110 00112333333344433332222110 111 Q ss_pred EEecCCceeeeeecchhhhhhcccCcCCCCHHHHHHHHHHHHHhhCCeEEEEeeCCCCceEEEEeeCCcceEEEEcCCcc Q lcl|Aclame:pro 70 IYQEDEYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVYIDDVGL 149 (429) Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~l~~~PN~~~s~~~~~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~l~p~~v~~~~~~~~~ 149 (429) .++ +.+.. ..+||+++|..+|++ ++.+++++||+|++++++..|++++|+|+++.+|++..+.+ T Consensus 75 ~k~-----------n~l~~--~~~Pn~~lt~~~f~~-~~~d~ll~Gnay~~~~rn~~G~~~~L~pl~~~~vr~~~~~~-- 138 (340) T protein:vir:98 75 VKR-----------NVLAS--TYIPHPLLSRQDFSR-FALDYLVFGNAFLEQRHSVTGQLIKLLTSPAKYTRRGVDDS-- 138 (340) T ss_pred hhh-----------hHHhh--ccCCCCCCCHHHHHH-HHHHHHhcCCeEEEEEECCCCcEEEEEEeCCceEEEcccCc-- Confidence 110 11111 237999999999975 56799999999999999999999999999999999865442 Q ss_pred eeeeeeEEEeecccCceEEEccceEEEeecCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHHccCCcceEEEeCC-C Q lcl|Aclame:pro 150 LNSKTKMWYVVNTGGQQRVLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVG-D 228 (429) Q Consensus 150 ~~~~~~~~~~~~~~g~~~~~~~~evih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~-~ 228 (429) .+|.+..+|....|+++|||||+.+++.++.+|+|++.++.+++.+..++.++..++|+||++|+|++.+++ . T Consensus 139 ------~~~~~~~~~~~~~~~~~eViHir~~~~~~~~~Gls~~~~a~~si~l~~aa~~~~~~~f~NGa~pg~il~~~~~~ 212 (340) T protein:vir:98 139 ------VFWFVENFTQPHEFAPDTVFHLLEPDINQEIYGLPEYLSALNSAWLNESATLFRRKYYQNGAHAGYIMYVTDPA 212 (340) T ss_pred ------EEEEEecCCeEEEEccccEEEEcCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEecCCC Confidence 345566778888999999999999888999999999999999999999999999999999999999998764 6 Q ss_pred CCHHHHHHHHHHHHHHhcccccccceeec-----CCCceeEecCCChhHHHHHHHHHHHHHHHHHHhcCChhhcCCccc- Q lcl|Aclame:pro 229 LNEDAKKVFRENFESMSSGLQNSHRIALM-----PVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSK- 302 (429) Q Consensus 229 ~~~e~~~~~~~~~~~~~~g~~~~~~~~vl-----~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~fgvp~~~l~~~~~- 302 (429) +++++.++++++|++ .+|..|.++++|+ ++|++|++++.+++|+||+|.+++++.+||++|||||.++|..+. T Consensus 213 ls~e~~~~lk~~~~~-~~G~~n~~~~~vl~~~g~~~g~~~~pls~~~~d~qf~e~k~~~~~eIa~a~~VPp~llGi~~~~ 291 (340) T protein:vir:98 213 QSATDVESLRDAMRN-SKGLGNFKNLFFYSPNGKPDGIKIVPLSEVATKDDFFNIKKASAADLMDAHRVPFQLMGGKPEN 291 (340) T ss_pred CCHHHHHHHHHHHHH-hcCccccCceeEecCCCCccceEEEEcCCChhHHHHHHHHHhhHHHHHHHhCCCHHHhcccCCC Confidence 899999999999987 5788899999998 679999999999999999999999999999999999999997554 Q ss_pred -cccccHHHHHHHHHHHHHhHHHHHHHHHHHHhhccchhhcchhhhhhhhhhHhhhh Q lcl|Aclame:pro 303 -ATLNNIEQQQQQFYTDTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAILRAD 358 (429) Q Consensus 303 -~~~~n~~~~~~~~~~~~l~P~~~~i~~~l~~~ll~~~~~~~~~~~~fd~~~l~~~d 358 (429) ++++|.+++.+.|++++|.|+++.|++ +|.+|..+ .++|+...+++.| T Consensus 292 t~~~sn~e~~~~~f~~~~l~Pl~~~iee-~n~~L~~e-------~~rF~~~~l~~~d 340 (340) T protein:vir:98 292 IGSLGDVEKVAKVFVRNELSPLQDRFRE-VNDWLGME-------VIRFKEYTLDNPE 340 (340) T ss_pred CCccccHHHHHHHHHHHHHHHHHHHHHH-HHhccccc-------ccccCccccccCC Confidence 468999999999999999999999995 88765422 3789988998888 No 96 >protein:vir:100328 Length: 346 # NCBI annotation: capsid portal protein Q # Family: family:all:196 # MgeID: mge:1484 # MgeName: phi-MhaA1-PHL101 # Cross-refs: genbank:acc:YP_655469;genbank:gi:109289937;genbank:GeneID:4157371 Probab=100.00 E-value=7.8e-53 Score=306.25 Aligned_cols=327 Identities=13% Similarity=0.131 Sum_probs=241.1 Q ss_pred Cchhhhhhcccccccccc---c-ccCCch-------HHHHHhhcCCCCcceechhhhhccHHHHHHHHHHHHhhccCceE Q lcl|Aclame:pro 1 MDSVKKFFNFEKRQTSQV---I-ELNKDD-------EKLLEWLGISPSTISVKGKNALKVATVFACIKILSESVSKLPLK 69 (429) Q Consensus 1 Mg~~~~~~~~~~~~~~~~---~-~~~~~~-------~~~~~~~~~~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~ 69 (429) |+-..+=-.. +..+..+ . ..+..+ ..+.+.++.... ....++-|.-...+..+.+.. +.+ T Consensus 1 m~~~~~~~~~-~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~-----~~~~~~pp~~~~~la~l~~~~---~~h 71 (346) T protein:vir:10 1 MKKQLRKNLT-QNDRLQPQAQTEIFSFGDPIPVLDRADILNYLECSAM-----YEKWYNPPMSFDGLAKSLRSS---THH 71 (346) T ss_pred CCcccCCCCC-cccccccccCeEEEecCCcceecCchhHHHHHHHhhc-----CCceEecCCCHHHHHHHHHhh---hhc Confidence 6654321000 0000000 0 000000 011111111000 000111111122222222111 111 Q ss_pred EEecCCceeeeeecchhhhhhcccCcCCCCHHHHHHHHHHHHHhhCCeEEEEeeCCCCceEEEEeeCCcceEEEEcCCcc Q lcl|Aclame:pro 70 IYQEDEYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVYIDDVGL 149 (429) Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~l~~~PN~~~s~~~~~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~l~p~~v~~~~~~~~~ 149 (429) - .......|.+..++ .+||++||+.+|++ ++.+++++||+|++++++..|++.+|+|++|.+|++..+.+. T Consensus 72 ~------~~i~~k~n~l~~l~-~~Pn~~~t~~~f~~-~~~d~ll~Gnay~~i~r~~~G~~~~L~pl~~~~v~~~~~~~~- 142 (346) T protein:vir:10 72 E------SAIITKANILLSTC-EVDSRYLSRRDLSS-FVKDYLVFGNAYFEVVRNRLGQVQRIESPLAKYVRKGLEAGQ- 142 (346) T ss_pred c------hhhhhhhhhHHHHH-hCCCCCCCHHHHHH-HHHHHHhcCCeEEEEEEcCCCcEEEEEEecCCceEEEEcCCe- Confidence 0 00111125666666 47999999999987 568999999999999999999999999999999998776642 Q ss_pred eeeeeeEEEeecccCceEEEccceEEEeecCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHHccCCcceEEEeC-CC Q lcl|Aclame:pro 150 LNSKTKMWYVVNTGGQQRVLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYV-GD 228 (429) Q Consensus 150 ~~~~~~~~~~~~~~g~~~~~~~~evih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~-~~ 228 (429) ..++.+..+|..+.|++++|||+|.+++.++.+|+||+.++...+.+..++.++..++|+||++|+|++.++ .. T Consensus 143 -----~~~~~~~~~g~~~~~~~~dIih~r~~~~~~~~~G~~~~~~a~~si~l~~~a~~~~~~~~~NG~~~~~il~~~d~~ 217 (346) T protein:vir:10 143 -----FYYVPQRFDHQEHEFAKGSIYHLLEPDINQDIYGLPQYLSALQSAWLNESATLFRRKYFLNGAHAGFVFYMSDAS 217 (346) T ss_pred -----EEEEEEccCCeEEEEecccEEEecCCCCCCCeeeccHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEeCCCC Confidence 234555677888999999999999988889999999999999999999999999999999999999999875 46 Q ss_pred CCHHHHHHHHHHHHHHhcccccccceeecC-----CCceeEecCCChhHHHHHHHHHHHHHHHHHHhcCChhhcCCccc- Q lcl|Aclame:pro 229 LNEDAKKVFRENFESMSSGLQNSHRIALMP-----VGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSK- 302 (429) Q Consensus 229 ~~~e~~~~~~~~~~~~~~g~~~~~~~~vl~-----~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~fgvp~~~l~~~~~- 302 (429) +++|+.++++++|++.+ |..|+++++++. +|+++++++.++.|+||+|.+++++++||++|||||.+||..+. T Consensus 218 l~~e~~~~i~~~~~~~~-g~~n~~~~~vl~~~~~~~gi~~~pis~~~~d~qf~e~k~~~~~~I~~af~VPp~llG~~~~~ 296 (346) T protein:vir:10 218 QKQEDVENIRQQLKQSK-GVGNFKNLFVHAPNGKKDGIQIIPIADVSAKDEFFNIKNVSRDDVLAAHRVPPQLMGIIPNN 296 (346) T ss_pred CCHHHHHHHHHHHHHhc-CccccCceeEecCCCCccceeEEecCCChhHHHHHHHHHHhHHHHHHHhCCCHHHhcccCCC Confidence 89999999999999865 668999999985 48899999999999999999999999999999999999987654 Q ss_pred -cccccHHHHHHHHHHHHHhHHHHHHHHHHHHhhccchhhcchhhhhhhhhhHhhhhH Q lcl|Aclame:pro 303 -ATLNNIEQQQQQFYTDTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAILRADI 359 (429) Q Consensus 303 -~~~~n~~~~~~~~~~~~l~P~~~~i~~~l~~~ll~~~~~~~~~~~~fd~~~l~~~d~ 359 (429) ++++|.+++.+.|++++|.|+++.|++ ++.++.. .+++|+...|++.|. T Consensus 297 ~~~~s~~e~~~~~f~~~~l~P~~~~iee-~n~~L~~-------e~i~F~~~~ll~~~~ 346 (346) T protein:vir:10 297 TGGFGNVADAAEVFFITEIEPLQERLKE-FNQWLGQ-------EVIKFKPSKLLQRTQ 346 (346) T ss_pred CCCcccHHHHHHHHHHHHHHHHHHHHHH-HHhhccc-------ceeeechhhhcccCC Confidence 468999999999999999999999985 6665532 258999999999887 No 97 >protein:vir:3743 Length: 345 # NCBI annotation: orf15 # Family: family:all:196 # MgeID: mge:79 # MgeName: HP1 # Cross-refs: genbank:acc:NP_043484;genbank:gi:9628619;genbank:GeneID:1261113 Probab=100.00 E-value=4.2e-52 Score=302.25 Aligned_cols=322 Identities=14% Similarity=0.102 Sum_probs=237.7 Q ss_pred Cchhhhhhcccccccc--cccccCCchH---HHHHhhcCC------CCcceechhhh----hccHHHHHHHHHHHHhhcc Q lcl|Aclame:pro 1 MDSVKKFFNFEKRQTS--QVIELNKDDE---KLLEWLGIS------PSTISVKGKNA----LKVATVFACIKILSESVSK 65 (429) Q Consensus 1 Mg~~~~~~~~~~~~~~--~~~~~~~~~~---~~~~~~~~~------~~~~~~~~~~a----~~~~~v~~~i~~ia~~ia~ 65 (429) |.--..--.......+ +....+...+ .+.+..+.. ...-+++.... -.++.+.+||...++.++ T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~epp~~~~~la~~~~~~~~h~~~i~~k~n~l~- 79 (345) T protein:vir:37 1 MKTNVKTDNKKGIVIAPINDRTFSLSEITASPALDYVGIGFDENYNCYLPPVNRHALAKLPHQNAQHGGILHSRANMVS- 79 (345) T ss_pred CCccccccchhhhcCCCceEEEeecCCcccchhhcccceeeecCCccccCCCCHHHHHHHhhcchhhcchhhhhhhHHh- Confidence 3332111000000000 0111111111 111111111 00111221111 113333444333332221 Q ss_pred CceEEEecCCceeeeeecchhhhhhcccCcCCCCHHHHHHHHHHHHHhhCCeEEEEeeCCCCceEEEEeeCCcceEEEEc Q lcl|Aclame:pro 66 LPLKIYQEDEYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVYID 145 (429) Q Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~PN~~~s~~~~~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~l~p~~v~~~~~ 145 (429) .+.+||+.||+.+|++ ++.+++++||+|++++|+..|++.+|+|++|.+|++..+ T Consensus 80 ------------------------~~~~Pn~~~t~~~f~~-~v~d~ll~Gnay~~i~rn~~G~~~~L~pl~~~~vr~~~d 134 (345) T protein:vir:37 80 ------------------------ATYEGGKALSKMEMRA-LCLNLIQFGDVGLLKVRNGFGQVVRLVPLSSLYLRVHKD 134 (345) T ss_pred ------------------------hccCCCCCCCHHHHHH-HHHHHHhcCCeEEEEEECCCCCEEEEEEecCceeEEeec Confidence 2347999999999975 557999999999999999999999999999999998776 Q ss_pred CCcceeeeeeEEEeecccCceEEEccceEEEeecCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHHccCCcceEEEe Q lcl|Aclame:pro 146 DVGLLNSKTKMWYVVNTGGQQRVLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQY 225 (429) Q Consensus 146 ~~~~~~~~~~~~~~~~~~g~~~~~~~~evih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~ 225 (429) .+... ...++.+...|....|+++|||||+.+++.++.+|+|++.++.+.+.+..++.+++.++|+||++|+||+.. T Consensus 135 ~~~~~---~~~~~~~~~~g~~~~~~~~eViHir~~~~~~~~~Gl~~~~~a~~si~l~~~a~~~~~~~f~NGa~~~~Il~~ 211 (345) T protein:vir:37 135 GGYSY---LMKKSLYDTAQEIYRYDAKDIIFIKLYDPMQQVYGSPDYVGGIQSALLNSDATVFRRRYFSNGAHMGFILYS 211 (345) T ss_pred CCeeE---EEeeeeeccCceEEEEccccEEEEcCCCCCCCcccchHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEe Confidence 64322 223344455678889999999999998888999999999999999999999999999999999999999986 Q ss_pred C-CCCCHHHHHHHHHHHHHHhcccccccceeec-----CCCceeEecCCChhHHHHHHHHHHHHHHHHHHhcCChhhcCC Q lcl|Aclame:pro 226 V-GDLNEDAKKVFRENFESMSSGLQNSHRIALM-----PVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLND 299 (429) Q Consensus 226 ~-~~~~~e~~~~~~~~~~~~~~g~~~~~~~~vl-----~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~fgvp~~~l~~ 299 (429) + ..+++|+.++++++|++.+++ .|.+.++++ ++|++|++++.++.|+||++.+++++.+||++|||||.++|. T Consensus 212 t~~~l~~e~~~~lk~~~~~~~g~-~n~~~~~i~~~~g~~~G~~~~pl~~~~~d~qf~e~k~~~~~dI~~a~~VPp~liGi 290 (345) T protein:vir:37 212 TDPDLTEEMEEEIARKISESKGV-GNFRSMFVNIAGGHPDGLKVIPIGDTGTKDEFANIKNISAQDVLTAHRFPAGLSGI 290 (345) T ss_pred CCCCCCHHHHHHHHHHHHHhcCc-cccCceeEecCCCCccceeEEEccCChhHHHHHHHHHHhHHHHHHHhCCCHHHhcc Confidence 5 478999999999999998755 566666665 568999999999999999999999999999999999999987 Q ss_pred ccc--cccccHHHHHHHHHHHHHhHHHHHHHHHHHHhhccchhhcchhhhhhhhhhHhh Q lcl|Aclame:pro 300 LSK--ATLNNIEQQQQQFYTDTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAILR 356 (429) Q Consensus 300 ~~~--~~~~n~~~~~~~~~~~~l~P~~~~i~~~l~~~ll~~~~~~~~~~~~fd~~~l~~ 356 (429) .+. ++++|.+++.+.|++++|.|+++.|++++|+.+ +...+.+++||..+|++ T Consensus 291 ~~~~t~~~s~~e~~~~~f~~~~l~P~~~~ie~~ln~~~----e~~~~~~i~F~~~~l~k 345 (345) T protein:vir:37 291 IPTNTGGLGDPLKYREVYHYDEVMPLQEIIAETINQDP----EIKNLLKIKFREQNFAK 345 (345) T ss_pred ccCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHhhhhh----ccCCcceEEECchhhcC Confidence 544 568999999999999999999999999999742 34457899999999987 No 98 >protein:vir:78749 Length: 337 # NCBI annotation: putative portal protein # Family: family:all:196 # MgeID: mge:1857 # MgeName: phiO18P # Cross-refs: genbank:acc:YP_001285643;genbank:gi:148727149;genbank:GeneID:5220095 Probab=100.00 E-value=5.9e-53 Score=306.94 Aligned_cols=321 Identities=11% Similarity=0.126 Sum_probs=235.4 Q ss_pred CchhhhhhcccccccccccccCCchHHHHHhhcCCCCcceechhhhhccHHHHHHHHHHHHhhc---cCceEEEecCCce Q lcl|Aclame:pro 1 MDSVKKFFNFEKRQTSQVIELNKDDEKLLEWLGISPSTISVKGKNALKVATVFACIKILSESVS---KLPLKIYQEDEYG 77 (429) Q Consensus 1 Mg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia---~~~~~~~~~~~~~ 77 (429) |+.-+. ++...+..+ ... .+. ||. ++..+....+..|+...-..+. ..|+....-.+- T Consensus 1 m~~~~~-----~~~~~~~~~---~~~-~~~-~~~--------p~~~~~~~~~~~~~~~~~~~~~~~~~pP~~~~~La~l- 61 (337) T protein:vir:78 1 MTKRQQ-----QPAQAAASS---PRP-SVV-FSM--------PEAIDPTAWMTDYTGVFYNPYGEYYQPPIDRKGLAKV- 61 (337) T ss_pred CCCccc-----CcccccccC---cee-EEE-ecC--------cccccCcchhHhhhhhhhccCcceecCCCCHHHHHHH- Confidence 443221 011111100 000 011 111 1112222333333333222111 222222110000 Q ss_pred eeeeecchhhhhhcccCcCCCCH----HHHHHHHHHHHHhhCCeEEEEeeCCCCceEEEEeeCCcceEEEEcCCcceeee Q lcl|Aclame:pro 78 IQRGTKHYLNNLLRLRPNPYMSS----MNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVYIDDVGLLNSK 153 (429) Q Consensus 78 ~~~~~~~~~~~~l~~~PN~~~s~----~~~~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~l~p~~v~~~~~~~~~~~~~ 153 (429) .........+|..+||..++. .++++.++.+++++||||++++|+..|++++|+|++|.+|++..++. T Consensus 62 --~~~~~~h~~~L~~k~N~~~~~f~~~~~~~~~~~~d~ll~GNay~~~~rn~~G~~~~L~pl~~~~v~~~~d~~------ 133 (337) T protein:vir:78 62 --ARANAHHGAILMARRNMVAGRFTNQRATITAFVHNYLQFGDGGLLKLRNSFGQVVGLHPLSSVYLRRREDGC------ 133 (337) T ss_pred --hhcchhhhhHHHhhhccccccCcCcHHHHHHHHHHHHhhCCeEEEEEECCCCcEEEEEEeCCceeEeeeCCe------ Confidence 000001133566789977665 47899999999999999999999999999999999999998865532 Q ss_pred eeEEEeecccCceEEEccceEEEeecCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHHccCCcceEEEeCC-CCCHH Q lcl|Aclame:pro 154 TKMWYVVNTGGQQRVLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVG-DLNED 232 (429) Q Consensus 154 ~~~~~~~~~~g~~~~~~~~evih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~-~~~~e 232 (429) ++++..++....|+++||||+|.+++.++.+|+||+.++.+++.+..+++.+..++|+||++|+|++..++ .++++ T Consensus 134 ---~~~~~~~~~~~~~~~~eIiHik~~~~~~~~~Gls~~~~a~~si~l~~aa~~~~~~~f~NGa~p~~il~~~~~~l~~e 210 (337) T protein:vir:78 134 ---FVYLQQGKPNLIYRPDDVIWLAQYDPEQQVYGMPDYLGGLQSALLNQDATLFRRRYFLNGAHMGFIFYATDPNMDDD 210 (337) T ss_pred ---EEEEEcCCceEEECCccEEEECCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhccCCCceeEEcCCCCCCHH Confidence 23344567778999999999999988899999999999999999999999999999999999999998764 68999 Q ss_pred HHHHHHHHHHHHhcccccccceeec-----CCCceeEecCCChhHHHHHHHHHHHHHHHHHHhcCChhhcCCcc---ccc Q lcl|Aclame:pro 233 AKKVFRENFESMSSGLQNSHRIALM-----PVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLS---KAT 304 (429) Q Consensus 233 ~~~~~~~~~~~~~~g~~~~~~~~vl-----~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~fgvp~~~l~~~~---~~~ 304 (429) +.+++++.|++ +.|..|.++++++ ++|++|++++.++.|+||+|.+++++++||++|||||.++|... .++ T Consensus 211 ~~~~lk~~~~~-~~G~~n~~~~~v~~~~g~~~Gi~~~pis~~~~d~qfle~k~~s~~eIa~a~~VPp~llGi~~~~~~~~ 289 (337) T protein:vir:78 211 TEEEMKEMIAN-SKGVGNFRSMFVNIPDGKPDGIKLIPVGDIATKDEFAAIKGITAQDVLTAHRYPPALAGIIPTNGGGG 289 (337) T ss_pred HHHHHHHHHHH-hcCcccccceEEEcCCCCccceeEEEcCCChhHHHHHHHHHHhHHHHHHHhCCCHHHcccccCCCcCc Confidence 99999999986 5677899998888 67899999999999999999999999999999999999998643 357 Q ss_pred cccHHHHHHHHHHHHHhHHHHHHHHHHHHhhccchhhcchhhhhhhhhhHh Q lcl|Aclame:pro 305 LNNIEQQQQQFYTDTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAIL 355 (429) Q Consensus 305 ~~n~~~~~~~~~~~~l~P~~~~i~~~l~~~ll~~~~~~~~~~~~fd~~~l~ 355 (429) ++|.+++.+.|++++|.|+++.|++++++++++...+ ..+++....++ T Consensus 290 ~~n~e~~~~~f~~~~L~P~~~~ie~~~n~~ll~~~~~---~~f~~~~~~~~ 337 (337) T protein:vir:78 290 LGDPEKYDATYARNEVLPLCELVQDAINSAGLPRALW---VTFRETIGAAV 337 (337) T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHhhhcCChhhc---eeccccccccC Confidence 8899999999999999999999999999887755332 24556656655 No 99 >protein:vir:1150 Length: 350 # NCBI annotation: predicted capsid packaging protein # Family: family:all:196 # MgeID: mge:24 # MgeName: phi CTX # Cross-refs: genbank:acc:NP_490599;genbank:gi:17313219;genbank:GeneID:927315 Probab=100.00 E-value=1e-51 Score=300.08 Aligned_cols=320 Identities=14% Similarity=0.169 Sum_probs=230.4 Q ss_pred Cchhhhhhccccc--ccc-----------cccccCC-------chHHHHHhhcCCCCcceechhhhhccHHHHHHHHHHH Q lcl|Aclame:pro 1 MDSVKKFFNFEKR--QTS-----------QVIELNK-------DDEKLLEWLGISPSTISVKGKNALKVATVFACIKILS 60 (429) Q Consensus 1 Mg~~~~~~~~~~~--~~~-----------~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~~~i~~ia 60 (429) |+-.++.-..... ... ....++. +...+.+.++.... ..+++-|.-+.++-.+. T Consensus 1 m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~v~~~~~~~~y~~~~~~------~~~~~pp~~~~~la~~~ 74 (350) T protein:vir:11 1 MSKRRSHRRQQPVTVQSAQEGEFIPRQGGRAEAFTFGDPMPVLDGRGILDYLECWPN------GRWYEPPLSMEGLAKSV 74 (350) T ss_pred CCccccCCCcCccccCCcchhhhccccccceEEEEeCCceeecCcchhhHHHHHhhc------CccccCCCCHHHHHHHH Confidence 6665432111000 000 0000000 00001111100000 00111111111211111 Q ss_pred Hh--hccCceEEEecCCceeeeeecchhhhhhcccCcCCCCHHHHHHHHHHHHHhhCCeEEEEeeCCCCceEEEEeeCCc Q lcl|Aclame:pro 61 ES--VSKLPLKIYQEDEYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDAS 138 (429) Q Consensus 61 ~~--ia~~~~~~~~~~~~~~~~~~~~~~~~~l~~~PN~~~s~~~~~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~l~p~ 138 (429) +. ..+-++..++ +-+.. ..+||+++|+++|++ ++.+++++||||++++++..|++.+|+|++|. T Consensus 75 ~~~~~h~~~l~~k~-----------n~l~~--~~~Pn~~~t~~~f~~-~v~d~ll~Gnay~~~~rn~~G~~~~L~~l~~~ 140 (350) T protein:vir:11 75 GSSVYLQSGLKFKR-----------NMLAK--TFIPHRLLSRATFEQ-FSLDWLTFGSAYLEQPRSRLGTRMPLQAPLAK 140 (350) T ss_pred hhhhhhccchhhhh-----------hhhhh--cccCCCCCCHHHHHH-HHHHHHhcCCeEEEEEEcCCCCEEEEEEeCCc Confidence 00 0011111110 01111 237999999999986 57799999999999999999999999999999 Q ss_pred ceEEEEcCCcceeeeeeEEEeecccCceEEEccceEEEeecCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHHccCC Q lcl|Aclame:pro 139 KVTVYIDDVGLLNSKTKMWYVVNTGGQQRVLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQ 218 (429) Q Consensus 139 ~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~evih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~ 218 (429) +|++..+++ .+|.+..+|..+.|+++|||||+.+++.+..+|+||+.++...+.+..++..+..++|+||++ T Consensus 141 ~vr~~~~~~--------~~~~~~~~~~~~~~~~~eVihir~~~~~~~~yGls~~~~a~~si~l~~~a~~~~~~~f~NGa~ 212 (350) T protein:vir:11 141 YMRRGTDLE--------TFYQVRSWKDEHEFEKGSVIQLREADINQEIYGVPEWFCALQSALLNESATLFRRKYYNNGSH 212 (350) T ss_pred eeEeeecCC--------eEEEEeeCCeEEEECcccEEEeCCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhccCC Confidence 999876553 245566778889999999999999999999999999999999999999999999999999999 Q ss_pred cceEEEeC-CCCCHHHHHHHHHHHHHHhcccccccceeec-----CCCceeEecCCChhHHHHHHHHHHHHHHHHHHhcC Q lcl|Aclame:pro 219 VKGLVQYV-GDLNEDAKKVFRENFESMSSGLQNSHRIALM-----PVGYQFQPISLNMSDAQFLENTELTIRQIATAFGI 292 (429) Q Consensus 219 ~~~~~~~~-~~~~~e~~~~~~~~~~~~~~g~~~~~~~~vl-----~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~fgv 292 (429) |+|++..+ ..+++|+.+++++.|++. .|..|+|+++|+ ++|++|+|++.+++|+||+|.+++++++||++||| T Consensus 213 ~~gil~~~~~~ls~e~~~~l~~~~~~~-~G~~N~~~~~v~~~~g~~~g~~~~pl~~~~~d~qf~e~k~~~~~eIa~a~~V 291 (350) T protein:vir:11 213 AGFILYMTDAAQNEEDIDALRTALKTA-KGPGNFRNLFVYAPNGKKEGIQLIPVSEVAAKDEFGSIKNISRDDQLAGLRV 291 (350) T ss_pred CceEEEecCCCCCHHHHHHHHHHHHHh-cCccccCceeeecCCCCccceEEEEcCCChhHHHHHHHHHHhHHHHHHHhCC Confidence 99999986 468999999999999885 677899999988 46899999999999999999999999999999999 Q ss_pred ChhhcCCccc--cccccHHHHHHHHHHHHHhHHHHHHHHHHHHhhccchhhcchhhhhhhhhhH Q lcl|Aclame:pro 293 KMHQLNDLSK--ATLNNIEQQQQQFYTDTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAI 354 (429) Q Consensus 293 p~~~l~~~~~--~~~~n~~~~~~~~~~~~l~P~~~~i~~~l~~~ll~~~~~~~~~~~~fd~~~l 354 (429) ||.++|..+. ++++|.+++.+.|++++|.|+++.|++ +|.++..+. ..+.+|+.+.| T Consensus 292 Pp~llGi~~~~t~~~sn~e~~~~~f~~~~L~P~~~~ie~-ln~~l~~~~----~~F~~~~~~~l 350 (350) T protein:vir:11 292 YPQLMGVVPQNAGGFGSISDAAAVWASLELAPMQTRLQQ-VNEMIGEEV----VRFAQFDAPGL 350 (350) T ss_pred CHHHhcccCCCCCCcCCHHHHHHHHHHHHHHHHHHHHHH-HHhhcCccc----cccCcccccCC Confidence 9999997655 568999999999999999999999985 887764321 12345666666 No 100 >protein:vir:3780 Length: 345 # NCBI annotation: orf15 # Family: family:all:196 # MgeID: mge:328 # MgeName: HP2 # Cross-refs: genbank:acc:NP_536820;genbank:gi:17981829;genbank:GeneID:929208 Probab=100.00 E-value=9.1e-52 Score=300.41 Aligned_cols=330 Identities=14% Similarity=0.108 Sum_probs=238.9 Q ss_pred Cchhhhhhcccc--cccccccccCCchHHH---HHhhcCCCCcceechhhhhccHHHHHHHHHHHHhhc--cCceEEEec Q lcl|Aclame:pro 1 MDSVKKFFNFEK--RQTSQVIELNKDDEKL---LEWLGISPSTISVKGKNALKVATVFACIKILSESVS--KLPLKIYQE 73 (429) Q Consensus 1 Mg~~~~~~~~~~--~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia--~~~~~~~~~ 73 (429) |.-....-.... ........++...+.. .+.++... ......++-|.-+.++-.+.+.-+ +-.+..+ T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~y~~~~~----~~~~~~~epp~~~~~la~l~~~~~~h~~~i~~k-- 74 (345) T protein:vir:37 1 MKTNVKTDNKKGIVIAPINDRTFSLNEISASPALDYVGIGF----DENYNCYLPPVNRHALAKLPHQNAQHGGILHSR-- 74 (345) T ss_pred CCCCccccchhhcccCcceeEEeecCCcccccchhhhhhhh----cCCccccCCCCCHHHHHHHhhcccccccceeee-- Confidence 332211000000 0000111111111111 11111000 001112232322333333322111 1111111 Q ss_pred CCceeeeeecchhhhhhcccCcCCCCHHHHHHHHHHHHHhhCCeEEEEeeCCCCceEEEEeeCCcceEEEEcCCcceeee Q lcl|Aclame:pro 74 DEYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVYIDDVGLLNSK 153 (429) Q Consensus 74 ~~~~~~~~~~~~~~~~l~~~PN~~~s~~~~~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~l~p~~v~~~~~~~~~~~~~ 153 (429) +...... -+||+.||+.+|++ ++.+++++||||++++|+..|++.+|+|++|.+|++..+.+.. . T Consensus 75 ----------~n~l~~~-~~Pn~~lt~~~f~~-~~~d~ll~Gnay~~~~rn~~G~~~~L~pl~~~~vr~~~d~~~~---~ 139 (345) T protein:vir:37 75 ----------ANMVSSL-YEGGKALSRMDMRA-LCLNLIQFGDVGLLKVRNGFGQVVRLVPLSSLYLRVRKDGGYS---Y 139 (345) T ss_pred ----------chHHHhh-ccCCCCCCHHHHHH-HHHHHHhcCCeEEEEEEcCCCcEEEEEEEcCceeEEEEeCCee---E Confidence 1122222 37999999999985 5679999999999999999999999999999999988776432 2 Q ss_pred eeEEEeecccCceEEEccceEEEeecCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHHccCCcceEEEeC-CCCCHH Q lcl|Aclame:pro 154 TKMWYVVNTGGQQRVLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYV-GDLNED 232 (429) Q Consensus 154 ~~~~~~~~~~g~~~~~~~~evih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~-~~~~~e 232 (429) ...++....+|....|+++||||+|.+++.++.+|+|++.++..++.+..++.+++.++|+||++|+|++..+ ..+++| T Consensus 140 ~~~~~~~~~~g~~~~~~~~dVihir~~~~~~~~~Gls~~~~a~~si~l~~~a~~~~~~~f~NG~~p~~Il~~~d~~l~~e 219 (345) T protein:vir:37 140 LMKKSLYDTAQEIYRYDAKDIIFIKLYDPMQQVYGSPDYVGGIQSALLNSDATVFRRRYFSNGAHMGFILYSTDPDLTEE 219 (345) T ss_pred EEEEeEecCCceEEEEccccEEEecCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEecCCCCCHH Confidence 2234445667788899999999999988899999999999999999999999999999999999999999875 568999 Q ss_pred HHHHHHHHHHHHhcccccccceeec-----CCCceeEecCCChhHHHHHHHHHHHHHHHHHHhcCChhhcCCccc--ccc Q lcl|Aclame:pro 233 AKKVFRENFESMSSGLQNSHRIALM-----PVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSK--ATL 305 (429) Q Consensus 233 ~~~~~~~~~~~~~~g~~~~~~~~vl-----~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~fgvp~~~l~~~~~--~~~ 305 (429) +.++++++|++. .|..|.++++++ ++|++|+|++.+++|+||.|.+++++++||++|||||.++|..+. +++ T Consensus 220 ~~~~lk~~~~~~-~g~~n~~~~~i~~p~g~~~G~~~~pls~~~~d~qf~e~k~~~~~dIa~a~~VPp~llGi~~~~~~~~ 298 (345) T protein:vir:37 220 MEEEIARKISES-KGVGNFRSMFVNIANGHPDGLKVIPIGDTGTKDEFANIKNISAQDVLTAHRFPAGLSGIIPTNTGGL 298 (345) T ss_pred HHHHHHHHHHHh-cCcccccceEEEcCCCcccceEEEEccCChhHHHHHHHHHHhHHHHHHHhCCCHHHhCccCCCCCCc Confidence 999999999884 677888888887 589999999999999999999999999999999999999987543 578 Q ss_pred ccHHHHHHHHHHHHHhHHHHHHHHHHHHhhccchhhcchhhhhhhhhhHhh Q lcl|Aclame:pro 306 NNIEQQQQQFYTDTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAILR 356 (429) Q Consensus 306 ~n~~~~~~~~~~~~l~P~~~~i~~~l~~~ll~~~~~~~~~~~~fd~~~l~~ 356 (429) +|.+++.+.|++++|.|+++.|++++|+.+ +...+.+++||..+|.+ T Consensus 299 ~~~e~~~~~f~~~~l~P~~~~ie~~ln~~~----~~~~~~~i~F~~~~L~~ 345 (345) T protein:vir:37 299 GDPLKYREVYHYDEVMPLQEIIAETINQDP----EIKNLLKIKFREQNFAK 345 (345) T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHhhhhc----cCCCcceEEecchhhcC Confidence 999999999999999999999999999742 33456788998877765 No 101 >protein:vir:5691 Length: 344 # NCBI annotation: gpQ # Family: family:all:196 # MgeID: mge:120 # MgeName: L-413C # Cross-refs: genbank:acc:NP_839850;genbank:gi:30065705;genbank:GeneID:1260599 Probab=100.00 E-value=2.1e-51 Score=298.44 Aligned_cols=321 Identities=14% Similarity=0.219 Sum_probs=229.5 Q ss_pred Cchhhhhhcccc-ccc------ccccccC-----CchHHHHHhhcCCCCcceechhhhhccHHHHHHHHHHHHhhc--cC Q lcl|Aclame:pro 1 MDSVKKFFNFEK-RQT------SQVIELN-----KDDEKLLEWLGISPSTISVKGKNALKVATVFACIKILSESVS--KL 66 (429) Q Consensus 1 Mg~~~~~~~~~~-~~~------~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia--~~ 66 (429) |+--++--.... +.+ ....+.. .+...+.+.++.... ..+++=|.-+.++..+.++-+ +- T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~v~~~~~~~~~~~~~~~------~~~~~pp~~~~~la~~~~a~~~h~s 74 (344) T protein:vir:56 1 MSKKKGKTPQPAAKTMTASAPKMEAFTFGEPVPVLDRRDILDYVECISN------GRWYEPPVSFTGLAKSLRAAVHHSS 74 (344) T ss_pred CCCCCCCCCchhhHHhhcCCCceEEEEcCCceeecCcchhhhHHHhhhc------CccccCCCCHHHHHHHHhhhhhhCc Confidence 554332100000 000 0000000 000001111110000 111111222222222221111 11 Q ss_pred ceEEEecCCceeeeeecchhhhhhcccCcCCCCHHHHHHHHHHHHHhhCCeEEEEeeCCCCceEEEEeeCCcceEEEEcC Q lcl|Aclame:pro 67 PLKIYQEDEYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVYIDD 146 (429) Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~l~~~PN~~~s~~~~~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~l~p~~v~~~~~~ 146 (429) +++.++ +-+.. .-+||++||+.+| +.++.+++++||||++++|+..|++.+|+|++|.+|++..++ T Consensus 75 ~i~~k~-----------n~l~~--~~~Pnp~~t~~~f-~~~~~d~ll~Gnay~~~~rn~~G~~~~L~pl~~~~v~~~~~~ 140 (344) T protein:vir:56 75 PIYVKR-----------NILAS--TFIPHPWLSQQDF-SRFVLDFLVFGNAFLEKRYSTTGKVIRLETSPAKYTRRGVEE 140 (344) T ss_pred cceehh-----------hhHHh--hcCCCCCCCHHHH-HHHHHHHHhcCCeEEEEEECCCCcEEEEEEeCCceeEEeecC Confidence 222211 11111 2379999999999 677899999999999999999999999999999999987655 Q ss_pred CcceeeeeeEEEeecccCceEEEccceEEEeecCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHHccCCcceEEEeC Q lcl|Aclame:pro 147 VGLLNSKTKMWYVVNTGGQQRVLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYV 226 (429) Q Consensus 147 ~~~~~~~~~~~~~~~~~g~~~~~~~~evih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~ 226 (429) + .+|++..+|....|++++|||++.+++.++.+|+||+.++...+.+..++.++..++|+||++|+|++..+ T Consensus 141 ~--------~~~~~~~~g~~~~~~~~dIiHir~~~~~~~~~Gls~~~~a~~si~l~~~a~~~~~~~f~NGa~pg~Il~~~ 212 (344) T protein:vir:56 141 D--------VYWWVPSFNEPTAFAPGSVFHLLEPDINQELYGLPEYLSALNSAWLNESATLFRRKYYENGAHAGYIMYVT 212 (344) T ss_pred C--------EEEEEecCCeEEEEcCccEEEECCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEec Confidence 3 24556677888899999999999988899999999999999999999999999999999999999999876 Q ss_pred C-CCCHHHHHHHHHHHHHHhcccccccceeec------CCCceeEecCCChhHHHHHHHHHHHHHHHHHHhcCChhhcCC Q lcl|Aclame:pro 227 G-DLNEDAKKVFRENFESMSSGLQNSHRIALM------PVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLND 299 (429) Q Consensus 227 ~-~~~~e~~~~~~~~~~~~~~g~~~~~~~~vl------~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~fgvp~~~l~~ 299 (429) + .+++|+.++++++|++..+ . ++++++++ ++|++|++++.+++|+||+|.+++++++||++|||||.++|. T Consensus 213 d~~ls~e~~~~lk~~~~~~~g-~-~~~r~l~l~~p~g~~~G~~~~pis~~~~d~qf~e~k~~s~~eIa~afrVPp~llGi 290 (344) T protein:vir:56 213 DAVQDRNDIEMLRENMVKSKG-R-NNFKNLFLYAPQGKADGIKIIPLSEVATKDDFFNIKKASAADLLDAHRIPFQLMGG 290 (344) T ss_pred CCCCCHHHHHHHHHHHHHhcC-C-CCccceEEecCCCCccceeEEEcCCChHHHHHHHHHHhhHHHHHHHhCCCHHHhcc Confidence 4 6899999999999998754 3 67888887 579999999999999999999999999999999999999997 Q ss_pred ccc--cccccHHHHHHHHHHHHHhHHHHHHHHHHHHhhccchhhcchhhhhhhhhhHhhhhH Q lcl|Aclame:pro 300 LSK--ATLNNIEQQQQQFYTDTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAILRADI 359 (429) Q Consensus 300 ~~~--~~~~n~~~~~~~~~~~~l~P~~~~i~~~l~~~ll~~~~~~~~~~~~fd~~~l~~~d~ 359 (429) .+. ++++|.+++.+.|++++|.|+++.|++ +|.++..+ .++|+.-.+...|- T Consensus 291 ~~~~t~~~~n~eq~~~~f~~~tL~Pl~~~ie~-~n~~l~~~-------~~~F~~y~l~~~~~ 344 (344) T protein:vir:56 291 KPENVGSLGDIEKVAKVFVRNELIPLQDRIRE-INGWIGQE-------VIRFKNYSLDTDNG 344 (344) T ss_pred CCCCCCccccHHHHHHHHHHHHHHHHHHHHHH-HHhhhccc-------cccCCCccccccCC Confidence 654 468999999999999999999999985 77776533 24554444433332 No 102 >protein:vir:6058 Length: 344 # NCBI annotation: gpQ # Family: family:all:196 # MgeID: mge:126 # MgeName: WPhi # Cross-refs: genbank:acc:NP_878199;genbank:gi:33438898;genbank:GeneID:1457733 Probab=100.00 E-value=3.1e-51 Score=297.45 Aligned_cols=321 Identities=14% Similarity=0.215 Sum_probs=228.8 Q ss_pred Cchhhhhhcccc-cccccc----cccCCch-------HHHHHhhcCCCCcceechhhhhccHHHHHHHHHHHHhh--ccC Q lcl|Aclame:pro 1 MDSVKKFFNFEK-RQTSQV----IELNKDD-------EKLLEWLGISPSTISVKGKNALKVATVFACIKILSESV--SKL 66 (429) Q Consensus 1 Mg~~~~~~~~~~-~~~~~~----~~~~~~~-------~~~~~~~~~~~~~~~~~~~~a~~~~~v~~~i~~ia~~i--a~~ 66 (429) |+--.+-..... .++... ...+... ..+.+.++.... ..+++-|.-+.++-.+.++- .+- T Consensus 1 m~~~~~~~~~~~~~~~~~~~~~~~~~~f~~p~~v~~~~~~~~~~~~~~~------~~~~~pp~~~~~la~~~~a~~~h~~ 74 (344) T protein:vir:60 1 MSKKKGKTLQPAAKKMTASAPKMEAFTFGEPVPVLDRRDILDYVECISN------GRWYEPPISFTGLAKSLRAAVHHSS 74 (344) T ss_pred CCcccCCCCCchHHhhcCCcCcEEEEEcCCceeecCCcchhHHHHhhhc------CccccCCCCHHHHHHHHHhhhhhcc Confidence 544321100000 000000 0000000 001111110000 11111111122221111111 111 Q ss_pred ceEEEecCCceeeeeecchhhhhhcccCcCCCCHHHHHHHHHHHHHhhCCeEEEEeeCCCCceEEEEeeCCcceEEEEcC Q lcl|Aclame:pro 67 PLKIYQEDEYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVYIDD 146 (429) Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~l~~~PN~~~s~~~~~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~l~p~~v~~~~~~ 146 (429) +++.++ +-+.. ..+||+.||+.+| +.++.+++++||||++++++..|++.+|+|++|.+|++..++ T Consensus 75 ~i~~k~-----------n~l~~--~~~Pn~~~t~~~f-~~~~~d~ll~Gnay~~i~rn~~G~~~~L~~l~~~~vr~~~~~ 140 (344) T protein:vir:60 75 PIYVKR-----------NILAS--TFIPHPWLSQQDF-SRFVLDFLVFGNAFLEKRYSTTGKVIRLETSPAKYTRRGVEE 140 (344) T ss_pred chhhhh-----------hHHHh--hccCCCCCCHHHH-HHHHHHHHhcCCeEEEEEECCCCcEEEEEEcCcceEEEeecC Confidence 122111 11211 2379999999999 578899999999999999999999999999999999987665 Q ss_pred CcceeeeeeEEEeecccCceEEEccceEEEeecCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHHccCCcceEEEeC Q lcl|Aclame:pro 147 VGLLNSKTKMWYVVNTGGQQRVLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYV 226 (429) Q Consensus 147 ~~~~~~~~~~~~~~~~~g~~~~~~~~evih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~ 226 (429) + .+|.+..+|....|+++||||++.+++.++.+|+||+.++..++.+..++.++..++|+||++|+|++..+ T Consensus 141 ~--------~~~~v~~~~~~~~~~~~eIiHir~~~~~~~~yGlsp~~~a~~si~l~~~a~~~~~~~f~NG~~pg~il~~~ 212 (344) T protein:vir:60 141 D--------VYWWVPSFNEPTAFAPGSVFHLLEPDINQELYGLPEYLSALNSAWLNESATLFRRKYYENGAHAGYIMYVT 212 (344) T ss_pred C--------eEEEEccCCeEEEEcCccEEEEcCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEec Confidence 3 24556677888899999999999988889999999999999999999999999999999999999999876 Q ss_pred -CCCCHHHHHHHHHHHHHHhcccccccceeec------CCCceeEecCCChhHHHHHHHHHHHHHHHHHHhcCChhhcCC Q lcl|Aclame:pro 227 -GDLNEDAKKVFRENFESMSSGLQNSHRIALM------PVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLND 299 (429) Q Consensus 227 -~~~~~e~~~~~~~~~~~~~~g~~~~~~~~vl------~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~fgvp~~~l~~ 299 (429) ..+++|+.++++++|++.++ . ++++.+++ ++|++|++++.++.|+||+|.+++++++||++|||||.+||. T Consensus 213 ~~~ls~e~~~~ik~~~~~~~g-~-~~~r~~~l~~p~g~~~g~~~~pis~~~~d~qf~e~k~~~~~eIa~af~VPp~llGi 290 (344) T protein:vir:60 213 DAVQDRNDIEMLRENMVKSKG-R-NNFKNLFLYAPQGKADGIKIIPLSEVATKDDFFNIKKASAADLLDAHRIPFQLMGG 290 (344) T ss_pred CcCCCHHHHHHHHHHHHHhcC-C-CCCcceEEecCCCCccceeEEEcCCChhHHHHHHHHHhhHHHHHHHhCCCHHHhcc Confidence 46999999999999998764 3 56777666 579999999999999999999999999999999999999987 Q ss_pred cccc--ccccHHHHHHHHHHHHHhHHHHHHHHHHHHhhccchhhcchhhhhhhhhhHhhhhH Q lcl|Aclame:pro 300 LSKA--TLNNIEQQQQQFYTDTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAILRADI 359 (429) Q Consensus 300 ~~~~--~~~n~~~~~~~~~~~~l~P~~~~i~~~l~~~ll~~~~~~~~~~~~fd~~~l~~~d~ 359 (429) .+.+ +++|.+++.+.|++++|.|+++.|+ +||.++... .++|+.-.+...|- T Consensus 291 ~~~~t~~~~n~e~~~~~f~~~~L~Pl~~~~e-~ln~~lg~~-------~i~F~~~~l~~~d~ 344 (344) T protein:vir:60 291 KPENVGSLGDIEKVAKVFVRNELIPLQDRIR-EINGWLGQE-------VIRFKNYSLDTDNG 344 (344) T ss_pred cCCCCCccccHHHHHHHHHHHHHHHHHHHHH-HHHHhcCCc-------ccccCccccCCCCC Confidence 5543 5899999999999999999999998 588875322 35566555554444 No 103 >protein:vir:2013 Length: 344 # NCBI annotation: gpQ # Family: family:all:196 # MgeID: mge:315 # MgeName: P2 # Cross-refs: genbank:acc:NP_046757;genbank:gi:9630328;genbank:GeneID:1261529 Probab=100.00 E-value=5.3e-51 Score=296.21 Aligned_cols=321 Identities=14% Similarity=0.214 Sum_probs=230.2 Q ss_pred Cchhhhhhcccc-ccccc----ccccCCc-------hHHHHHhhcCCCCcceechhhhhccHHHHHHHHHHHH--hhccC Q lcl|Aclame:pro 1 MDSVKKFFNFEK-RQTSQ----VIELNKD-------DEKLLEWLGISPSTISVKGKNALKVATVFACIKILSE--SVSKL 66 (429) Q Consensus 1 Mg~~~~~~~~~~-~~~~~----~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~a~~~~~v~~~i~~ia~--~ia~~ 66 (429) |+--+.--.... +.+.. ....+.+ ...+.+.++... -..+++=|.-+.++-.+.+ ...+- T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~p~~v~~~~~~~~~~~~~~------~~~~~~pp~~~~~la~~~~a~~~h~~ 74 (344) T protein:vir:20 1 MSKKKGKTPQPAAKTMTASGPKMEAFTFGEPVPVLDRRDILDYVECIS------NGRWYEPPVSFTGLAKSLRAAVHHSS 74 (344) T ss_pred CCcccCCCCcchhhhhhccCCceEEEEcCCceEecCcchhhhhhhhhh------cCceecCCCCHHHHHHHHhhhhhhCc Confidence 655432100000 00000 0000000 000111111000 0111111221222222211 11122 Q ss_pred ceEEEecCCceeeeeecchhhhhhcccCcCCCCHHHHHHHHHHHHHhhCCeEEEEeeCCCCceEEEEeeCCcceEEEEcC Q lcl|Aclame:pro 67 PLKIYQEDEYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVYIDD 146 (429) Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~l~~~PN~~~s~~~~~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~l~p~~v~~~~~~ 146 (429) +++.++ +-+.. ..+||+.||+.+| +.++.+++++||||++++|+..|++++|+|+++.+|++..+. T Consensus 75 ~i~~k~-----------n~l~~--~~~Pn~~lt~~~f-~~~~~d~ll~Gnay~~i~rn~~G~~~~L~pl~~~~vr~~~~~ 140 (344) T protein:vir:20 75 PIYVKR-----------NILAS--TFIPHPWLSQQDF-SRFVLDFLVFGNAFLEKRYSTTGKVIRLETSPAKYTRRGVEE 140 (344) T ss_pred cceehh-----------hhHHH--hccCCCCCCHHHH-HHHHHHHHhcCCeEEEEEECCCCcEEEEEEcCCceeEeeecC Confidence 222221 11111 2379999999999 577899999999999999999999999999999999987655 Q ss_pred CcceeeeeeEEEeecccCceEEEccceEEEeecCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHHccCCcceEEEeC Q lcl|Aclame:pro 147 VGLLNSKTKMWYVVNTGGQQRVLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYV 226 (429) Q Consensus 147 ~~~~~~~~~~~~~~~~~g~~~~~~~~evih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~ 226 (429) + .++.+..+|....|+++||||++.+++.++.+|+||+.++..++.+..++.++..++|+||++|+|++.++ T Consensus 141 ~--------~~~~~~~~~~~~~~~~~eIiHir~~~~~~~~yGls~~~~a~~si~l~~~a~~~~~~~f~NGa~p~~Il~~~ 212 (344) T protein:vir:20 141 D--------VYWWVPSFNEPTAFAPGSVFHLLEPDINQELYGLPEYLSALNSAWLNESATLFRRKYYENGAHAGYIMYVT 212 (344) T ss_pred C--------EEEEEccCCeEEEEcCccEEEeCCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEec Confidence 3 24556677888999999999999888889999999999999999999999999999999999999999875 Q ss_pred -CCCCHHHHHHHHHHHHHHhcccccccceeec------CCCceeEecCCChhHHHHHHHHHHHHHHHHHHhcCChhhcCC Q lcl|Aclame:pro 227 -GDLNEDAKKVFRENFESMSSGLQNSHRIALM------PVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLND 299 (429) Q Consensus 227 -~~~~~e~~~~~~~~~~~~~~g~~~~~~~~vl------~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~fgvp~~~l~~ 299 (429) ..+++++.++++++|++.+++ ++++.+++ ++|++|++++.++.|+||+|.+++++++||++|||||.++|. T Consensus 213 d~~l~~e~~~~ik~~~~~~~g~--~n~r~l~l~~p~g~~~gi~~~pis~~~~d~qf~e~k~~s~~eIa~af~VPp~llGi 290 (344) T protein:vir:20 213 DAVQDRNDIEMLRENMVKSKGR--NNFKNLFLYAPQGKADGIKIIPLSEVATKDDFFNIKKASAADLLDAHRIPFQLMGG 290 (344) T ss_pred CcCCCHHHHHHHHHHHHHhcCC--CCccceEEecCCCCccceeEEEcCCChhHHHHHHHHHhhHHHHHHHhCCCHHHhcc Confidence 568999999999999987543 56777776 479999999999999999999999999999999999999997 Q ss_pred ccc--cccccHHHHHHHHHHHHHhHHHHHHHHHHHHhhccchhhcchhhhhhhhhhHhhhhH Q lcl|Aclame:pro 300 LSK--ATLNNIEQQQQQFYTDTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAILRADI 359 (429) Q Consensus 300 ~~~--~~~~n~~~~~~~~~~~~l~P~~~~i~~~l~~~ll~~~~~~~~~~~~fd~~~l~~~d~ 359 (429) .+. ++++|.+++.+.|++++|.|+++.|+ +++.++..+ .++|+.-.+...|. T Consensus 291 ~~~~t~~~~n~e~~~~~f~~~~l~P~~~~~e-~in~~lg~~-------~i~F~~~~l~~~d~ 344 (344) T protein:vir:20 291 KPENVGSLGDIEKVAKVFVRNELIPLQDRIR-EINGWLGQE-------VIRFKNYSLDTDND 344 (344) T ss_pred CCCCCCccccHHHHHHHHHHHHHHHHHHHHH-HHHHhcCCc-------ccccCccccccCCC Confidence 554 45899999999999999999999998 577765422 35676666655454 No 104 >protein:vir:4698 Length: 251 # NCBI annotation: hypothetical protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:102 # MgeName: phiPV83 # Cross-refs: genbank:acc:NP_061630;genbank:gi:9635717;genbank:GeneID:1262980 Probab=100.00 E-value=4.3e-51 Score=296.73 Aligned_cols=248 Identities=22% Similarity=0.321 Sum_probs=200.2 Q ss_pred CchhhhhhcccccccccccccCCchHHHHHhhcC--CCCcceechhhhhccHHHHHHHHHHHHhhccCceEEEecCCcee Q lcl|Aclame:pro 1 MDSVKKFFNFEKRQTSQVIELNKDDEKLLEWLGI--SPSTISVKGKNALKVATVFACIKILSESVSKLPLKIYQEDEYGI 78 (429) Q Consensus 1 Mg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~~ 78 (429) ||||.+++ ++...... .....+...+.. ......++.+.|+++|+||+||++||++||++|+++++..+. T Consensus 1 MglF~~~~---~r~~~~~~---~~~~~~~~~~~~~~~~~~~~v~~~~al~~~~v~~~i~~ia~~iA~lp~~~~~~~~~-- 72 (251) T protein:vir:46 1 MGIFYKNE---KRDLQYNE---DDLQMMVQTLPSFQGTKLRQYKDIEAIRHSDIFTAVMMIASDLARMPIRVTVNGQI-- 72 (251) T ss_pred CCcccccc---ccccCCCc---cchhhhhhhhccccCcCcceechhhhhccHHHHHHHHHHHHhHhhCceEEeeCccc-- Confidence 99986543 33222211 111122222211 223456888999999999999999999999999999986543 Q ss_pred eeeecchhhhhhcccCcCCCCHHHHHHHHHHHHHhhCCeEEEEeeCCCCceEEEEeeCCcceEEEEcCCcceeeeeeEEE Q lcl|Aclame:pro 79 QRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVYIDDVGLLNSKTKMWY 158 (429) Q Consensus 79 ~~~~~~~~~~~l~~~PN~~~s~~~~~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~l~p~~v~~~~~~~~~~~~~~~~~~ 158 (429) ...|+++++|+.+||+.||+++||+.++.+++++||||++++|+..|++.+|+|++|++|++..+.++...+. .... T Consensus 73 --~~~~~~~~ll~~~Pn~~~t~~~f~~~l~~~lll~Gnay~~i~r~~~G~~~~L~~i~~~~v~v~~~~~g~~~~~-~~~~ 149 (251) T protein:vir:46 73 --NYSDRIVNLLNTRPNPMYNGYIFKLVVFVSALLTSHGYIEITRDKTGEPMNLTFRKTSEIELKSDARGRLYYF-HQRI 149 (251) T ss_pred --cccchHHHHHhccCCCCCCHHHHHHHHHHHHhhcCCeEEEEEECCCCcEEEEEEECCceEEEEECCCCcEEEE-EEEe Confidence 3468999999999999999999999999999999999999999999999999999999999998876443221 1112 Q ss_pred eecccCceEEEccceEEEeecCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHHccCCcceEEEeCCCC-CHHHHHHH Q lcl|Aclame:pro 159 VVNTGGQQRVLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGDL-NEDAKKVF 237 (429) Q Consensus 159 ~~~~~g~~~~~~~~evih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~-~~e~~~~~ 237 (429) ....+|..+.|+++||||||.+ +.++.+|+||+.++..++.++.+++++..++|+||++|+|++++++.+ ++++.+++ T Consensus 150 ~~~~~g~~~~~~~~diiH~r~~-~~dg~~G~spi~~~~~~i~~~~~~~~~~~~~f~ng~~p~gil~~~~~l~~~e~~~~~ 228 (251) T protein:vir:46 150 DSNGNNIERNVKFEDMLDIKFY-SLDGINGLSLLDTLSRTIESDNNGKDFLNNFLRNGTHAGGILKMKGVLDNKKARDRA 228 (251) T ss_pred ccCCcceeEEECCccEEEecCc-CCCCeeecCHHHHHHHHHHHHHHHHHHHHHHHHccCCCcEEEEeCCCCCCHHHHHHH Confidence 2345577789999999999976 467899999999999999999999999999999999999999999887 46678999 Q ss_pred HHHHHHHhcccccccceeecCCCcee Q lcl|Aclame:pro 238 RENFESMSSGLQNSHRIALMPVGYQF 263 (429) Q Consensus 238 ~~~~~~~~~g~~~~~~~~vl~~g~~~ 263 (429) ++.|++.++|.+|+|++++ ||+= T Consensus 229 ~~~~~~~~~g~~n~g~~~~---gm~~ 251 (251) T protein:vir:46 229 REEFPKVLVELNKLGKLSY---SMNQ 251 (251) T ss_pred HHHHHHHhcCccccccccc---ccCC Confidence 9999999999999998766 3332 No 105 >protein:vir:98853 Length: 219 # NCBI annotation: hypothetical protein # Family: family:all:196 # MgeID: mge:1495 # MgeName: F108 # Cross-refs: genbank:acc:YP_654729;genbank:gi:109302914;genbank:GeneID:4156058 Probab=100.00 E-value=4.3e-43 Score=252.84 Aligned_cols=211 Identities=12% Similarity=0.150 Sum_probs=174.1 Q ss_pred eEEEEcCCcceeeeeeEEEeecccCceEEEccceEEEeecCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHHccCCc Q lcl|Aclame:pro 140 VTVYIDDVGLLNSKTKMWYVVNTGGQQRVLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQV 219 (429) Q Consensus 140 v~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~evih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~ 219 (429) |++..++.. .+ ......+..+|..++|+++||+|||.+++.++++|+||+.+++.++....++.+++.++|+||++| T Consensus 1 ~r~~~dg~~--~y-~~~~~~~~~~g~~~~~~~~eilH~r~~~~~~~~~Glspi~~a~~~i~~~~aa~~~~~~~f~Ng~~p 77 (219) T protein:vir:98 1 MRVCKDGNY--KY-LMKKSLYDTKSEIYEYNKNDVIFIKLYDPMQQVYGSPDYVGGITSALLNSDATIFRRRYYSNGAHM 77 (219) T ss_pred CceeecCeE--EE-EEecceecCCceeEEeccccEEEecCCCCCCCcceecHHHHHHHHHHHHHHHHHHHHHHHhcCCCC Confidence 333222211 00 111122344577889999999999999889999999999999999999999999999999999999 Q ss_pred ceEEEeCC-CCCHHHHHHHHHHHHHHhcccccccceeec-----CCCceeEecCCChhHHHHHHHHHHHHHHHHHHhcCC Q lcl|Aclame:pro 220 KGLVQYVG-DLNEDAKKVFRENFESMSSGLQNSHRIALM-----PVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIK 293 (429) Q Consensus 220 ~~~~~~~~-~~~~e~~~~~~~~~~~~~~g~~~~~~~~vl-----~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~fgvp 293 (429) +|++.+++ .+++++++++++.|++. .|..|+++++++ ++|++|++++++++|+||+|++++++++||++|||| T Consensus 78 ~gil~~~~~~l~~e~~~~~~~~~~~~-~g~~n~~~~~l~~~gg~~~G~~~~~~~~~~~d~qfle~rk~~~~eIa~~fgVP 156 (219) T protein:vir:98 78 GFILYSTDPDMTEEMEDEIAERIRDS-KGVGNFRSMFVNIAGGHPDGLKVIPIGDTGQKDEFANIKNISAQDVLTSHRFP 156 (219) T ss_pred ceEEEeCCCCCCHHHHHHHHHHHHHh-cCcccccceeEecCCCCccceeEEEccCCHHHHHHHHHHHhhHHHHHHHhCCC Confidence 99998765 69999999999999885 566777777776 579999999999999999999999999999999999 Q ss_pred hhhcCCc--cccccccHHHHHHHHHHHHHhHHHHHHHHHHHHhhccchhhcchhhhhhhhhhHhhhh Q lcl|Aclame:pro 294 MHQLNDL--SKATLNNIEQQQQQFYTDTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAILRAD 358 (429) Q Consensus 294 ~~~l~~~--~~~~~~n~~~~~~~~~~~~l~P~~~~i~~~l~~~ll~~~~~~~~~~~~fd~~~l~~~d 358 (429) |.+||.. +.++|+|++++...|+++||.|++..||++||++++.+. +.+++|+.+...-.+ T Consensus 157 p~~lG~~~~~~~~~sn~eq~~~~f~~~tL~P~~~~ie~~ln~~~~~~~----~~~~~F~~~~~~d~~ 219 (219) T protein:vir:98 157 PGLSGIIPVNTAGLGDPLKIREAYQADEVLPLQEIIAESINSDYEIKS----ALKVNFKQPEKRDKN 219 (219) T ss_pred HHHcccccCCCCCccCHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCC----ccEEeecCcccccCC Confidence 9999864 346799999999999999999999999999999866543 456778765543333 No 106 >protein:vir:5249 Length: 437 # NCBI annotation: hypothetical protein # Family: family:all:297 # MgeID: mge:117 # MgeName: Aaphi23 # Cross-refs: genbank:acc:NP_852754;genbank:gi:31544029;interpro:IPR006445;uniprot:Q7Y5U6;genbank:GeneID:2753529 Probab=99.94 E-value=7.6e-27 Score=163.77 Aligned_cols=399 Identities=12% Similarity=0.066 Sum_probs=235.0 Q ss_pred CchhhhhhcccccccccccccCCchHHHHHhhcCCCCcceechh-hhhccHHHHHHHHHHHHhhccCceEEEecCCceee Q lcl|Aclame:pro 1 MDSVKKFFNFEKRQTSQVIELNKDDEKLLEWLGISPSTISVKGK-NALKVATVFACIKILSESVSKLPLKIYQEDEYGIQ 79 (429) Q Consensus 1 Mg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~~~ 79 (429) |.+.+.+.++...-....... ... .+........... .+.+++.++++|+.+|+.+-+..+.+...+.+... T Consensus 1 ~~~~D~~~~~~~~~g~~~~~~------~~~-~~~~~~~~~~~l~a~Y~~~~l~~~~vd~~a~d~~r~~~~i~~~d~~~~~ 73 (437) T protein:vir:52 1 MKFFDGIKSLALKLGSKQEQT------YYS-PSLSLTDDLVQLEALWRDNWIANKVCIKRPEDMVRNWREIYSNDLNSKQ 73 (437) T ss_pred CchhhhhHhHHhcCCCccccc------eee-cCccccccHHHHHHHHHhCchhhHHhhcchHHhhcCCceEecCCCCHHH Confidence 888877666432111100000 000 0100000001112 23468999999999999999999998653222110 Q ss_pred eeecchhhhhhcccCcCCCCHHHHHHHHHHHHHhhCCeEEEEeeCC---------CCceEEEEeeCCcceEEEEcC--Cc Q lcl|Aclame:pro 80 RGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDR---------KGKVQALWPIDASKVTVYIDD--VG 148 (429) Q Consensus 80 ~~~~~~~~~~l~~~PN~~~s~~~~~~~~~~~~l~~G~~~~~~~~~~---------~g~~~~l~~l~p~~v~~~~~~--~~ 148 (429) . ..+...+. + ....+-+...+.+.-++|.++++++.+. .|.++.|.++++..|++.... +. T Consensus 74 ~---~~~~~~~~-~----l~~~~~l~~a~~~~rl~G~a~i~i~~d~~~~~~pl~~~~~~~~~~v~~~~~v~~~~~~~~dp 145 (437) T protein:vir:52 74 L---DLFTKFER-S----LKLRETLTKALQWSSLYGSVGLLVVTDSQNTSAPLKPTERLKRLIILPKWKISPTGTKDDDV 145 (437) T ss_pred H---HHHHHHHH-h----hcHHHHHHHHHHhcccccceEEEEEecCCCcccccccCCceeEEEEechhhccccccccccc Confidence 0 11222221 1 1223444455555568999999998865 377889999999998742221 11 Q ss_pred --ceeeeeeEEEeecccCceEEEccceEEEeec---CCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHHccCCcceEE Q lcl|Aclame:pro 149 --LLNSKTKMWYVVNTGGQQRVLKPEEILHFKN---GITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLV 223 (429) Q Consensus 149 --~~~~~~~~~~~~~~~g~~~~~~~~evih~~~---~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~ 223 (429) ..++. ..+|.+..++..+.+-++.|+||.. +.+.+.+.|.|+++.+...+............++.+.... ++ T Consensus 146 ~s~~fg~-p~~y~v~~~~~~~~iH~SRii~~~~~~~~~~~~~~~G~s~le~~~~~i~~~~~~~~~~~~l~~~~~~~--v~ 222 (437) T protein:vir:52 146 LSPNFGR-YSEYSILGGSQSITVHHSRLIILNANDAPLSDNDIWGVSDLEKIIDVLKRFDSASVNVGDLIFESKID--IF 222 (437) T ss_pred cccccCc-ceEEEEecCCcceeEccceeEEecCccCCCccccccCCchHHHHHHHHHHHHHHHHHHHHHHHHcCCC--ce Confidence 11222 2344455555667899999999963 3345677899999999999999999999999988876554 34 Q ss_pred EeCC---CCCHHHHHHHHHHHHHHhcccccccceeecCCCceeEecCCChhHHHHHHHHHHHHHHHHHHhcCChhhcCCc Q lcl|Aclame:pro 224 QYVG---DLNEDAKKVFRENFESMSSGLQNSHRIALMPVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDL 300 (429) Q Consensus 224 ~~~~---~~~~e~~~~~~~~~~~~~~g~~~~~~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~fgvp~~~l~~~ 300 (429) ++++ .++....+.+.+.++....+ .+.+++++++.+-+|+.++.+..++. +.......+||.+++||...|.+. T Consensus 223 k~~~l~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~d~~~~~e~~~~~~sgl~--~~l~~~~~~iaaa~~iP~t~L~G~ 299 (437) T protein:vir:52 223 KIAGLSDKIAAGMENEVASVISAVQEI-KSATNSLLLDAENEYDRKELTFTGLK--DLLTEFRNAVAGAADMPVTILFGQ 299 (437) T ss_pred ecchHHHHhcCCcHHHHHHHHHHHHHh-cCCCceEEEcCCcceEEEecCcCCHH--HHHHHHHHHHHHHhcCchhhhcCc Confidence 4432 12221122333333332222 35577899999999999988877654 778888999999999999998776 Q ss_pred cccccccHHHHHHHHHH-------HHHhHHHHHHHHHHHHhhccchhhcchhhhhhhhhhHhhhhHH-------HHHHHH Q lcl|Aclame:pro 301 SKATLNNIEQQQQQFYT-------DTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAILRADIK-------TRYEAY 366 (429) Q Consensus 301 ~~~~~~n~~~~~~~~~~-------~~l~P~~~~i~~~l~~~ll~~~~~~~~~~~~fd~~~l~~~d~~-------~~~~~~ 366 (429) +.+..++.++..+.|+. .-+.|+++.+...|-+..+... ..+++++| ..|...+.+ .+++++ T Consensus 300 s~~Glasge~D~~~yyd~i~~~Qe~~l~p~le~l~~~i~~~~~g~~--~~~~~~~f--~pL~~~s~kekae~~~~~a~a~ 375 (437) T protein:vir:52 300 SVSGLASGDEDIQNYHEAIRRLQETRLRPIFEIIDPLICNELFGGL--PADWWFEF--VPLTTVKQEQQINMLNTFATAA 375 (437) T ss_pred CcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC--CCcceEEe--CCcCCcCHHHHHHHHHHHHHHH Confidence 66656666777777776 5677888777777665544332 23455555 456655644 445568 Q ss_pred HHHHhCCCCCHHHHHHHhC----CCCCCCcceeeeccccccccccccccCCCCCCCCCCCCCCCC Q lcl|Aclame:pro 367 RTGIQGGFLKPNEARSKED----LPPEAGGDRLLVNGNMLPIDMAGQAYLKGGDTNGEVSKEGNE 427 (429) Q Consensus 367 ~~~~~~g~~t~NE~R~~~G----l~~~~~gD~~~~~~n~~~~~~~~~~~~~~g~~~~~~~~~~~~ 427 (429) .+++++|+++++|+|+++. ++.++..|.--.. +..+.....++..+..++..+.++ .+ T Consensus 376 ~~~~~~g~i~~~e~r~~L~~~g~~~~i~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~--~~ 437 (437) T protein:vir:52 376 NTLIQNGVLNEYQIANELRESGLFANISAEHIEELK-NADEFAGNFEEPEKMEGAQVQNSE--DQ 437 (437) T ss_pred HHHHhcCCCCHHHHHHHHHhcCCCCCCCcccccccc-CCCCCCCccCCCCCCCCCCCCCCC--CC Confidence 8889999999999999873 3344433311111 111111001111111111111111 11 No 107 >protein:vir:107742 Length: 537 # NCBI annotation: gp28 # Family: family:all:297 # MgeID: mge:1520 # MgeName: BcepB1A # Cross-refs: genbank:acc:YP_024875;genbank:gi:48697517;genbank:GeneID:2948359 Probab=99.89 E-value=2.9e-23 Score=144.10 Aligned_cols=407 Identities=10% Similarity=0.053 Sum_probs=218.4 Q ss_pred Cchhhhhhccccc-cc---ccccc-cCCchHHHHHhhcCCC-----------Ccceechhh-hhccHHHHHHHHHHHHhh Q lcl|Aclame:pro 1 MDSVKKFFNFEKR-QT---SQVIE-LNKDDEKLLEWLGISP-----------STISVKGKN-ALKVATVFACIKILSESV 63 (429) Q Consensus 1 Mg~~~~~~~~~~~-~~---~~~~~-~~~~~~~~~~~~~~~~-----------~~~~~~~~~-a~~~~~v~~~i~~ia~~i 63 (429) |.+-...-....+ .. ..... ...+...+....+... ......... +.+++.+..+|+.+|+.+ T Consensus 48 ~~~~~~~~~~~~~~~~~~~~~a~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~a~Y~~~~l~r~iVd~~A~d~ 127 (537) T protein:vir:10 48 MAIRDHAIAMMPKVDGSHPDMAMDGLDVEGGTFSAYANPNLSEGLVLWYAQQAFIGHQMCALIATHWLVNKACSQMPRDA 127 (537) T ss_pred CCCCCccCcccccccccccchhccccccchhhhhhhccccccchhhhhccccCCccHHHHHHHHhCchhhhhhhhhhHHh Confidence 2221110000000 00 00000 0011111111111100 000011122 336899999999999999 Q ss_pred ccCceEEEecCCceeeeeecchhhhhhcccCcCCCCHHHHHHHHHHHHHhhCCeEEEEeeC-C---------------CC Q lcl|Aclame:pro 64 SKLPLKIYQEDEYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFD-R---------------KG 127 (429) Q Consensus 64 a~~~~~~~~~~~~~~~~~~~~~~~~~l~~~PN~~~s~~~~~~~~~~~~l~~G~~~~~~~~~-~---------------~g 127 (429) .+-.+.+...+++.... .....|......+.-+..|.+ .+.+..++|.+++++... . .| T Consensus 128 ~r~~~~i~~~~~~~~~~----~~~~~l~~~~~~l~~~~~l~~-a~~~~rlyG~~~i~i~v~~~D~~~~~~Pl~~~~i~kg 202 (537) T protein:vir:10 128 MRKGYKIISDDGNELDP----KDAKFIDRYDRAFNIKKHAIQ-FVRKGRIFGIRIALFKVDSPDPYYYEKPFNIDGVMPG 202 (537) T ss_pred hcCCceeecCCcccccH----HHHHHHHHHHHHhhHHHHHHH-HHHhcccccceEEEEeecCcCCccccccccccccccc Confidence 99988887654433221 222333333333333444444 455556689988876432 1 23 Q ss_pred ceEEEEeeCCcceEEEEc------CCcceeeeeeEEEeecccCceEEEccceEEEeecCC------CCCcccccCHHHHH Q lcl|Aclame:pro 128 KVQALWPIDASKVTVYID------DVGLLNSKTKMWYVVNTGGQQRVLKPEEILHFKNGI------TLDGLVGVPTMEYL 195 (429) Q Consensus 128 ~~~~l~~l~p~~v~~~~~------~~~~~~~~~~~~~~~~~~g~~~~~~~~evih~~~~~------~~~~~~G~s~~~~~ 195 (429) ..+.|.+++|.++++... .....++....| . ..| +.+-++.|+||.... +...+.|.|.++.+ T Consensus 203 ~~k~l~vidp~~~~~~~~~~~~~dp~sp~fg~P~~y-~--v~g--~~iH~SRli~f~g~~~p~~~~~~~~~~G~Svlq~~ 277 (537) T protein:vir:10 203 AYKGIVQIDPYWCAPLLDAQASSNPVSMHFYEPTYW-L--ING--KKYHRSHLAIYINDEVVDFLKPSYIYGGVPLPQQI 277 (537) T ss_pred ceeEEEEechhhcccccchhhhccCCccccCCceee-e--ecC--eEecceeEEEecCCCCchhhhcccCcccccHHHHH Confidence 456788999988876431 111222222222 2 233 457889999986332 22456799999999 Q ss_pred HHHHHHHHHHHHHHHHHHHccCCcceEEEeCCCC-CHHHHHHHHHHHHHHhcccccccceeecCC-CceeEecCCChhHH Q lcl|Aclame:pro 196 KSTLENSASADKFINNFYKQGLQVKGLVQYVGDL-NEDAKKVFRENFESMSSGLQNSHRIALMPV-GYQFQPISLNMSDA 273 (429) Q Consensus 196 ~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~-~~e~~~~~~~~~~~~~~g~~~~~~~~vl~~-g~~~~~~~~~~~d~ 273 (429) ...+............++........-+.....+ ++++ +.++++....+.+|. ++++++. +-+|+.++.+...+ T Consensus 278 ~~~l~~~~~t~~~~~~l~~~~~~~v~k~~~~~~l~~~~~---~~~r~~~~~~~r~n~-g~~~id~e~e~~e~~~~~lsgl 353 (537) T protein:vir:10 278 MERVYAAERTANEGPMLAMTKRQTVLKVDAAQVLANKQQ---FDETMSWWTATRDNY-QVRVVDKDNEDVVQIDTTLNDL 353 (537) T ss_pred HHHHHHHHHHHHHHHHHHHhcCCceeeechHHhhcCHHH---HHHHHHHHHhhcCCc-ceeEecCCCceeEEEeccCCCH Confidence 9999999999999988888776653333222222 3333 334443333343344 4556555 68898888776665 Q ss_pred HHHHHHHHHHHHHHHHhcCChhhcCCcc-ccccccHHHHHHHHHH------HHHhHHHHHHHHHHHHhhccchhhcchhh Q lcl|Aclame:pro 274 QFLENTELTIRQIATAFGIKMHQLNDLS-KATLNNIEQQQQQFYT------DTLQATLTMYEQEMTYKLFLDSELDKGFY 346 (429) Q Consensus 274 ~~~e~~~~~~~~Ia~~fgvp~~~l~~~~-~~~~~n~~~~~~~~~~------~~l~P~~~~i~~~l~~~ll~~~~~~~~~~ 346 (429) .+........||.+.|||...|.+.. .+..++.++..+.|+. ..|.|.+..+.+.+-+..+... .+ T Consensus 354 --~~~l~~~~~~iAa~~~IP~t~L~G~sp~GlnatGe~D~~~yyd~I~~~Qe~l~p~l~~l~~ll~~~~~~~~---~~-- 426 (537) T protein:vir:10 354 --DKVIMNQYQLVCAIARTPAPKMLGTVPTGFNSTGDYEEASYHEECESTQDDMRPLIDRHHQLVCRSHLRKR---IR-- 426 (537) T ss_pred --HHHHHHHHHHHHhhhCCCceeeccCCccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC---cc-- Confidence 47788889999999999999774433 2333444545555553 3478988888887776655432 23 Q ss_pred hhhhhhhHhhhhHHHHHH-------HHHHHHhCCCCCHHHHHHHhCCCCCCCcceeeeccccccccccc-cccCCCCCCC Q lcl|Aclame:pro 347 SKFNVDAILRADIKTRYE-------AYRTGIQGGFLKPNEARSKEDLPPEAGGDRLLVNGNMLPIDMAG-QAYLKGGDTN 418 (429) Q Consensus 347 ~~fd~~~l~~~d~~~~~~-------~~~~~~~~g~~t~NE~R~~~Gl~~~~~gD~~~~~~n~~~~~~~~-~~~~~~g~~~ 418 (429) +.|.+..|...+.+++++ ++.+++.+|++++||+|+.|+.+|..+.+.+....+........ +...+.++.. T Consensus 427 ~~i~f~pL~~~s~kEkAei~~~~a~a~~~~~~~G~i~~~Evr~~L~~~~~~g~~~l~~~~~~ed~e~~~~~~~~~~~~~~ 506 (537) T protein:vir:10 427 VKVEFPPMDAPKESERADTFLKKMQAAKLAFEMGAVDGVDVNEYLRMDPTLGFTSITPAMRPTDAEDIDVDDEGKPVRII 506 (537) T ss_pred eEEEeCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhccCccccccccCCCChhhhhcccCCccCCcCCCC Confidence 444456787777777665 48889999999999999999887654333221111110000000 0000000000 Q ss_pred CC-----------CC----------CCCCCC Q lcl|Aclame:pro 419 GE-----------VS----------KEGNEG 428 (429) Q Consensus 419 ~~-----------~~----------~~~~~~ 428 (429) .+ .+ ...+++ T Consensus 507 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~ 537 (537) T protein:vir:10 507 EDQPAPSEMFGATSSGESANDPRDSGAAFED 537 (537) T ss_pred CCCCCccccCCCCccccccCCCccCccccCC Confidence 00 00 000111 No 108 >protein:vir:94049 Length: 532 # NCBI annotation: hypothetical protein # Family: family:all:297 # MgeID: mge:1493 # MgeName: OP2 # Cross-refs: genbank:acc:YP_453629;genbank:gi:84662665;genbank:GeneID:5142559 Probab=99.89 E-value=2.8e-23 Score=144.21 Aligned_cols=412 Identities=11% Similarity=0.062 Sum_probs=223.1 Q ss_pred Cchhhhhhcccccccc------------cccc-cCCchHH-HH---Hhhc-----------CCCCcceech-hhhhccHH Q lcl|Aclame:pro 1 MDSVKKFFNFEKRQTS------------QVIE-LNKDDEK-LL---EWLG-----------ISPSTISVKG-KNALKVAT 51 (429) Q Consensus 1 Mg~~~~~~~~~~~~~~------------~~~~-~~~~~~~-~~---~~~~-----------~~~~~~~~~~-~~a~~~~~ 51 (429) .+--.|..+..++.+. ...+ ....... +. .+.+ .......+.. ..+.+++. T Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~l~a~Y~~~~l 96 (532) T protein:vir:94 17 LQQAQRVDAKRATHTSLGLATAHEIDPTAYSPYERNAAQNAMAMDYGLQTGRNGRNALSFVEATSWPGFPTLALLAQLPE 96 (532) T ss_pred hhhHhhhhhhhhhhhhhhhhhhhhhcccccccccccccccccccccccCcccccccccccccccccchHHHHHHHHcCch Confidence 1111111110000000 0000 0000000 00 0000 0000011111 22346899 Q ss_pred HHHHHHHHHHhhccCceEEEecCCceeeeeecchhhhhhcccCcCCCCHHHHHHHHHHHHHhhCCeEEEEeeCC------ Q lcl|Aclame:pro 52 VFACIKILSESVSKLPLKIYQEDEYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDR------ 125 (429) Q Consensus 52 v~~~i~~ia~~ia~~~~~~~~~~~~~~~~~~~~~~~~~l~~~PN~~~s~~~~~~~~~~~~l~~G~~~~~~~~~~------ 125 (429) ++.+|+.+|+.+-+-.+.+...+++.... .....|...-..+ ...+-+...+.+..++|.+++++.... T Consensus 97 ~r~~Vd~~aed~~r~~~~i~~~~~~~~~~----~~~~~i~~~~~~l-~v~~~l~~a~~~~rlyG~a~i~i~v~~~~~~~~ 171 (532) T protein:vir:94 97 YRTMHETPADECVRAWGKITCSSKDELAA----DKATRITQKLEQY-NVRTLVRTVVIHDQAYGGAHVFPHLKMDGDSVP 171 (532) T ss_pred hhhhhccchHHHhhCCceEeeCCccccch----HHHHHHHHHHHhh-hHHHHHHHHHHhhhcccceEEEEEeccCCcccc Confidence 99999999999999988887654432211 2222222222222 233444555666678999988764422 Q ss_pred -------------CCceEEEEeeCCcceEEEEcC--C--cceeeeeeEEEeecccCceEEEccceEEEeecCC------C Q lcl|Aclame:pro 126 -------------KGKVQALWPIDASKVTVYIDD--V--GLLNSKTKMWYVVNTGGQQRVLKPEEILHFKNGI------T 182 (429) Q Consensus 126 -------------~g~~~~l~~l~p~~v~~~~~~--~--~~~~~~~~~~~~~~~~g~~~~~~~~evih~~~~~------~ 182 (429) .|..++|.+++|.+|++.... + ...++....|. . ..| +.+-++.|+||.... + T Consensus 172 ~~~p~~l~~~~I~~g~~~~l~vld~~~v~p~~~~~~dp~sp~fg~P~~y~-v-~~g--~~iH~SRli~f~g~~~p~~~~~ 247 (532) T protein:vir:94 172 ADAPLLLSPSFVQRGCLIGFATIEPMWLSPNAYNATDPTLPSFYKPDSWI-A-TSG--KKIHSSRIHTVVGRPVGDMLKA 247 (532) T ss_pred ccccccccccccccceeeEEEeechheecccccccccccccccCCceeEE-E-ccC--eeeccceEEEecCCCchhhhcc Confidence 234568999999988764321 1 11122222222 2 223 357899999996332 2 Q ss_pred CCcccccCHHHHHHHHHHHHHHHHHHHHHHHHccCCcceEEEeCCCCCHHHHHHHHHHHHHHhcccccccceeecCC-Cc Q lcl|Aclame:pro 183 LDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGDLNEDAKKVFRENFESMSSGLQNSHRIALMPV-GY 261 (429) Q Consensus 183 ~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~g~~~~~~~~vl~~-g~ 261 (429) ...++|.|.++.+...+............+................++.+..+++.+++.....+.+| .++++++. +- T Consensus 248 ~~~~~G~Svlq~~~~~l~~~~~t~~~~~~l~~~~~~~v~k~~~a~~ls~~~~~~~~~r~~~~~~~~~n-~g~~~id~~~e 326 (532) T protein:vir:94 248 AYSFRGVSISQLAMPYVDNWLRTRQSVSDTVKQFSMTNLATDMAQLLAPGGAQSLDARLQLFNLYRDN-RNIGALDKGTE 326 (532) T ss_pred ccccccccHHHHHHHHHHHHHHHHHHHHHHHHhcCCceeeechHHhhcchhHHHHHHHHHHHHhhcCC-ccceEEcCCCc Confidence 24557999999999999999999998888777755443322222334556667777777655444334 44566664 57 Q ss_pred eeEecCCChhHHHHHHHHHHHHHHHHHHhcCChhhcCCcccc-ccccHHHHHHHHHH-------HHHhHHHHHHHHHHHH Q lcl|Aclame:pro 262 QFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKA-TLNNIEQQQQQFYT-------DTLQATLTMYEQEMTY 333 (429) Q Consensus 262 ~~~~~~~~~~d~~~~e~~~~~~~~Ia~~fgvp~~~l~~~~~~-~~~n~~~~~~~~~~-------~~l~P~~~~i~~~l~~ 333 (429) +|++++.+..++ .+.......+||.+.|||...|.+.+.+ -.++.+.....|+. ..+.|+++.+-+.|-+ T Consensus 327 ~~e~~~~~lsgl--~~~l~~~~~~iAaa~~IP~t~LfG~sp~GlnstGe~D~~~yyd~I~s~Qe~~l~p~le~l~~~l~~ 404 (532) T protein:vir:94 327 EIQQTNTPLSGL--DSLQAQSQEQMAAVSHIPLVKLLGITPNGLNASSDGEIRVWYDFIAGYQATNLTPLMEWIIDLIQL 404 (532) T ss_pred eeEEEecccCCH--HHHHHHHHHHHHhHhCCCeeeeecCCcccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Confidence 898888777765 4778888999999999999977554332 22333434444444 4578888888888766 Q ss_pred hhccchhhcchhhhhhhhhhHhhhhHHHHH-------HHHHHHHhCCCCCHHHHHHHhCCCCCCCcceeeeccccc-cc- Q lcl|Aclame:pro 334 KLFLDSELDKGFYSKFNVDAILRADIKTRY-------EAYRTGIQGGFLKPNEARSKEDLPPEAGGDRLLVNGNML-PI- 404 (429) Q Consensus 334 ~ll~~~~~~~~~~~~fd~~~l~~~d~~~~~-------~~~~~~~~~g~~t~NE~R~~~Gl~~~~~gD~~~~~~n~~-~~- 404 (429) ..+... ..+++++| ..|...+.++++ +++.+++.+|++++||+|+.++.+|..+.+.....-... .. T Consensus 405 s~~g~~--~~d~~~~f--~pL~~~s~kEkAei~~~~a~a~~~~~~~Gvi~~~Evr~~l~~~~~~~~~~~~~~~~~~~~~~ 480 (532) T protein:vir:94 405 SEYGQI--DPGLAWEW--SPLMELDDKELAEVRQLNASTDSTLMELGVIDAKMVQQRLAADPTSGYAGALGERDELDDVE 480 (532) T ss_pred HhcCCC--CCCceEEe--CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHhcCCcccccccccccccccccc Confidence 555432 23455555 456666666554 456888999999999999999998876544322111100 00 Q ss_pred -----cccc-cccCCCCCCCCCCCCCCCCCC Q lcl|Aclame:pro 405 -----DMAG-QAYLKGGDTNGEVSKEGNEGN 429 (429) Q Consensus 405 -----~~~~-~~~~~~g~~~~~~~~~~~~~n 429 (429) .... ...++++.+. +.+..+.++| T Consensus 481 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~d 510 (532) T protein:vir:94 481 EIAKQLMAAALNPPATAPQT-PNPQPDSEDD 510 (532) T ss_pred chhhhhcccccCCCCCCCCC-CCCCCCCCCC Confidence 0000 0111111111 1111111122 No 109 >protein:vir:79647 Length: 435 # NCBI annotation: PorT # Family: family:all:297 # MgeID: mge:1872 # MgeName: TLS # Cross-refs: genbank:acc:YP_001285520;genbank:gi:148734503;genbank:GeneID:5220005 Probab=99.86 E-value=9.5e-23 Score=141.33 Aligned_cols=386 Identities=11% Similarity=0.088 Sum_probs=209.7 Q ss_pred CchhhhhhcccccccccccccCCchHHHHHhhcCCC----Ccceech---hhh-hccHHHHHHHHHHHHhhccCceEEEe Q lcl|Aclame:pro 1 MDSVKKFFNFEKRQTSQVIELNKDDEKLLEWLGISP----STISVKG---KNA-LKVATVFACIKILSESVSKLPLKIYQ 72 (429) Q Consensus 1 Mg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~---~~a-~~~~~v~~~i~~ia~~ia~~~~~~~~ 72 (429) ||+|.+ + ++++..+.. .....+..-.|... .....+. ..+ .+++.+..+|+.+|+.+-+..+.+.. T Consensus 1 ~~~~m~--~--~~~~~~~~D--~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~Y~~~~l~~~~Vd~~aed~~r~g~~i~g 74 (435) T protein:vir:79 1 MGVFMS--D--KVKAITKED--GYNEIFGSKDGTFRPNAFYMQRAAFKALSQFYEEDGMARRIVDVIPEEMVTPGFKVDG 74 (435) T ss_pred CCcccc--c--ccccchhhc--chhhhhcccccccccCcccCCcCCHHHHHHHHhcCchhhhhhccchHHhhcCCceecC Confidence 999853 1 111111111 11111111111111 1111122 223 46889999999999999998888753 Q ss_pred cCCceeeeeecchhhhhhcccCcCCCCHHHHHHHHHHHHHhhCCeEEEEee-C---------CCCceEEEEeeCCcceEE Q lcl|Aclame:pro 73 EDEYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEF-D---------RKGKVQALWPIDASKVTV 142 (429) Q Consensus 73 ~~~~~~~~~~~~~~~~~l~~~PN~~~s~~~~~~~~~~~~l~~G~~~~~~~~-~---------~~g~~~~l~~l~p~~v~~ 142 (429) .+++. .+...+. .. ...+-+...+.+..++|.+++++.. + ..|....|.++++..|++ T Consensus 75 ~~~~~-------~~~~~~~----~l-~~~~~l~~a~~~~rl~G~~~i~i~~~d~~~~~~Pl~~~g~i~~i~v~d~~~i~~ 142 (435) T protein:vir:79 75 VKNEK-------SFKSRWD----EL-RLNAKIIDALSWSRLFGGSAILAVVADNKMLKSPVKPGAQLEDIRVYDRYQITI 142 (435) T ss_pred CChHH-------HHHHHHH----Hh-hHHHHHHHHHHhhhccccEEEEEEecCCCCcccccccCCceeeEEeechhhccc Confidence 32211 1111121 11 2234455566666889998887764 2 235566889999988875 Q ss_pred EEcC---CcceeeeeeEEEeecccC-ceEEEccceEEEeec------CCCCCcccccCHH-HHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 143 YIDD---VGLLNSKTKMWYVVNTGG-QQRVLKPEEILHFKN------GITLDGLVGVPTM-EYLKSTLENSASADKFINN 211 (429) Q Consensus 143 ~~~~---~~~~~~~~~~~~~~~~~g-~~~~~~~~evih~~~------~~~~~~~~G~s~~-~~~~~~i~~~~~~~~~~~~ 211 (429) .... ....++....|.....++ ..+.+-++.|+||.. ..+...++|.|++ +.+...+............ T Consensus 143 ~~~~~dp~sp~fg~P~~y~v~~~~~~~~~~iH~SRli~~~g~~~p~~~~~~~~~~G~S~l~e~~~~~l~~~~~~~~~~~~ 222 (435) T protein:vir:79 143 HERETNARSVRYGEPKLYKISPGGDIPEFFVHYSRICIIDGERVSNEKRRQNDGWGASILNKRLIEAIVDYNYCQELATQ 222 (435) T ss_pred hhhccCCcccccCcceEEEEecCCCCCceEEcceeEEEecCCcchhhhccccCcccchHHHHHHHHHHHHHHHHHHHHHH Confidence 3321 112223333333322222 346788999999962 2344667899998 5788989998888888888 Q ss_pred HHHccCCcceEEEeCC---CC-CHHHHHHHHHHHHHHhcccccccceeecCCCceeEecCCChhHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 212 FYKQGLQVKGLVQYVG---DL-NEDAKKVFRENFESMSSGLQNSHRIALMPVGYQFQPISLNMSDAQFLENTELTIRQIA 287 (429) Q Consensus 212 ~~~ng~~~~~~~~~~~---~~-~~e~~~~~~~~~~~~~~g~~~~~~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia 287 (429) ++...... +++++. .+ ++.....++.++........+.+.+++..++-+|+.++.+..++ .+.......+|| T Consensus 223 l~~~~~~~--v~~~~~l~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~i~~~~e~~e~~~~~lsgl--~~~~~~~~~~ia 298 (435) T protein:vir:79 223 LLRRKQQA--VWKARDLALMCDDEEGRYAARLRLAQVDDESGVGKAIGIDATDEEYEVLNSDVSGV--PEFLQEKIDRIV 298 (435) T ss_pred HHHHhcCc--cccchhHHHhhcCccchHHHHHHHHHHHHhcCCCCceeEecCCcceEEEecccCCH--HHHHHHHHHHHH Confidence 77665443 233322 11 23333344444444333333445566666677899888777765 577899999999 Q ss_pred HHhcCChhhcCCcccccc-ccHHHHHHHHHHH-------HHhHHHHHHHHHHHHhhccchhhcchhhhhhhhhhHhhhhH Q lcl|Aclame:pro 288 TAFGIKMHQLNDLSKATL-NNIEQQQQQFYTD-------TLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAILRADI 359 (429) Q Consensus 288 ~~fgvp~~~l~~~~~~~~-~n~~~~~~~~~~~-------~l~P~~~~i~~~l~~~ll~~~~~~~~~~~~fd~~~l~~~d~ 359 (429) .+.|||...|.+.+.+.. ++.++..+.|+.. .+.|.+..+-..+ .. ..+++++| ..|...+. T Consensus 299 aa~~IP~t~L~G~s~~glnstgd~d~~~yyd~i~~~Qe~~l~p~l~~l~~li----~~----s~d~~~~f--~pL~~~se 368 (435) T protein:vir:79 299 ALTGIHEIIIKNKNTGGVSASQNTALETFYKLIDRKRVEDYKPILEFLLPFM----IS----ETEWSIEF--EPLSVPSD 368 (435) T ss_pred hhhCCCeeeeccCCccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHh----hc----CCCCeEEe--CCCCCCCH Confidence 999999988865544433 4444455555543 3445444443332 21 23455555 55666666 Q ss_pred HHH-------HHHHHHHHhCCCCCHHHHHHHh-CCCCCCCcceeeeccccccccccccccCCCCCCCCCCCCCCCCCC Q lcl|Aclame:pro 360 KTR-------YEAYRTGIQGGFLKPNEARSKE-DLPPEAGGDRLLVNGNMLPIDMAGQAYLKGGDTNGEVSKEGNEGN 429 (429) Q Consensus 360 ~~~-------~~~~~~~~~~g~~t~NE~R~~~-Gl~~~~~gD~~~~~~n~~~~~~~~~~~~~~g~~~~~~~~~~~~~n 429 (429) +++ ++++.+++.+|+++++|+|+.+ ...+.-+.. ......++.. .+.+.++..+++|+- T Consensus 369 kEkAei~~~~a~a~~~~~~~g~i~~~e~r~~L~~~~~~~~~~----~~~~~~~~~~-------~d~~~~~~~e~g~~~ 435 (435) T protein:vir:79 369 KDKAEIMAKNVESVVKLKAEQAINLKETRDTLRSICPDLKIM----DNDNIELPEP-------EDLDPEPGQEGGLNK 435 (435) T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHhccccCCC----CcccccCCcc-------ccCCCCCCCCCCCCC Confidence 544 4557778999999999999877 322221100 0000011111 111111222222222 No 110 >protein:vir:99563 Length: 862 # NCBI annotation: minor head protein-like protein # Family: family:all:297 # MgeID: mge:1544 # MgeName: BcepF1 # Cross-refs: genbank:acc:YP_001039808;genbank:gi:126011058;genbank:GeneID:4818258 Probab=99.84 E-value=5.4e-21 Score=131.71 Aligned_cols=404 Identities=10% Similarity=0.060 Sum_probs=213.6 Q ss_pred Cchhhhhh-------------------------------cc---cccccccccccCCchHHHHHhhcCCCCcceech-hh Q lcl|Aclame:pro 1 MDSVKKFF-------------------------------NF---EKRQTSQVIELNKDDEKLLEWLGISPSTISVKG-KN 45 (429) Q Consensus 1 Mg~~~~~~-------------------------------~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 45 (429) |.+..++- +. .......... .......+|+.... ...+.. .. T Consensus 66 ~~~~~~~~~~~~~~~~~a~~~a~~~~~~~~~~~~~Dgl~n~~~~lG~~~~~s~y--~~~~~~~~~~~~~~-f~gyql~al 142 (862) T protein:vir:99 66 VEISDSVNAKSVSGKNFAMDSAVRSAIKAITGFAMDDGGGAPVPIGAEGKQSSY--AVPEALQDWYLSQG-FIGHQACAL 142 (862) T ss_pred ccccccccchhhhhhhhcchhhcchhhhhhhhhhhhcchhhhhhcccccccccc--ccchhccccccccC-cccHHHHHH Confidence 11111110 00 0000000000 00000111111100 000111 23 Q ss_pred hhccHHHHHHHHHHHHhhccCceEEEecCCceeeeeecchhhhhhcccCcCCCCHHHHHHHHHHHHHhhCCeEEEEeeC- Q lcl|Aclame:pro 46 ALKVATVFACIKILSESVSKLPLKIYQEDEYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFD- 124 (429) Q Consensus 46 a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~~~~~~~~~~~~~l~~~PN~~~s~~~~~~~~~~~~l~~G~~~~~~~~~- 124 (429) +.+++.+..+|+.+|+.+-+-.+.+...+++.... ......|...-..+ ...+-+...+.+.-++|.+++++... T Consensus 143 Y~~~~larkiVd~pAeDatR~g~~I~~~~d~~e~~---~e~~~~ie~~~~rL-~v~~~l~eair~~RLyGga~ililv~~ 218 (862) T protein:vir:99 143 IAQHWLVDKACSLAGEDAIRNGWHLKSLGEGEEID---EESLEKFKAIDVEF-KVKENLIEFNRFKNVFGIRVAIFVVDS 218 (862) T ss_pred HHhCchhhhhhhhhhHHHhhCCceEeecCcccccC---HHHHHHHHHHHHHh-hHHHHHHHHHHhcccccceEEEEEecC Confidence 34689999999999999999999998654321110 11112222111111 22333444455556788777765432 Q ss_pred C---------------CCceEEEEeeCCcceEEEE----cCC--cceeeeeeEEEeecccCceEEEccceEEEeecCC-- Q lcl|Aclame:pro 125 R---------------KGKVQALWPIDASKVTVYI----DDV--GLLNSKTKMWYVVNTGGQQRVLKPEEILHFKNGI-- 181 (429) Q Consensus 125 ~---------------~g~~~~l~~l~p~~v~~~~----~~~--~~~~~~~~~~~~~~~~g~~~~~~~~evih~~~~~-- 181 (429) . .|.+++|.+++|.++.+.. ..+ ...++....| . ..| ..+-++.||||.... T Consensus 219 ~D~~~LsqPLn~e~I~kG~lkgl~vlDp~w~~p~~v~~~~~Dp~sp~yGkP~~y-~--I~g--~~IH~SRliif~g~~vp 293 (862) T protein:vir:99 219 EDPDYYEKPFNPDGITPGSYRGISQIDPYWMMPMLTAESTADPSSQFFYEPEFW-I--ISG--QKYHRSHLIIARGPQPA 293 (862) T ss_pred cCchhhhcCcCcccccccceeEEEEechhhhcccccccccccccccccCCceee-e--ecC--eeeccceeEEecCCCch Confidence 1 1345788899988877532 111 1222222222 2 233 346678888886432 Q ss_pred ----CCCcccccCHHHHHHHHHHHHHHHHHHHHHHHHccCCcceEEEeCC--CCCHHHHHHHHHHHHHHhccccccccee Q lcl|Aclame:pro 182 ----TLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVG--DLNEDAKKVFRENFESMSSGLQNSHRIA 255 (429) Q Consensus 182 ----~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~--~~~~e~~~~~~~~~~~~~~g~~~~~~~~ 255 (429) +...+.|.|.++.+...+............++.+.... +++++. .+..+ +.+.++++....+.+| .+++ T Consensus 294 d~lk~ay~f~G~SvLe~iyd~L~~~d~t~~saa~Ll~ka~l~--v~ktd~l~~l~~e--d~l~~r~~~~~~~rdN-~Gi~ 368 (862) T protein:vir:99 294 DILKPTYIFGGIPLVQRIYERVYAAERTANEAPLLAMNKRTT--AIHTDTAKAIANE--DKFIQRLMFWVRYRDN-HAVK 368 (862) T ss_pred hhhhccCCccCccHHHHHHHHHHHHHHHHHHHHHHHHHhccc--eeechhHhhhccH--HHHHHHHHHHHhccCc-ceeE Confidence 33445799999999999999999999999998886554 334332 22222 3344444443333333 5588 Q ss_pred ecCCCceeEecCCChhHHHHHHHHHHHHHHHHHHhcCChhhcCCcc-ccccccHHHHHHHHHH-------HHHhHHHHHH Q lcl|Aclame:pro 256 LMPVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLS-KATLNNIEQQQQQFYT-------DTLQATLTMY 327 (429) Q Consensus 256 vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~fgvp~~~l~~~~-~~~~~n~~~~~~~~~~-------~~l~P~~~~i 327 (429) +++.+-+|+.++.+...++ +.......+||.+.+||...|.+.+ .+..++.++..+.||. .-|.|+++.+ T Consensus 369 liD~eEe~e~ls~slSGL~--dll~~~~q~IAaas~IP~tiLfGqspaGlnATGE~D~~nYyD~I~s~QE~~L~P~LerL 446 (862) T protein:vir:99 369 VLGTDETMEQFDTSLADFD--AVIMGQYQLVASIAKTPATKLLGTAPKGFNSTGEFETISYHEELESIQEHVYMPFLQRH 446 (862) T ss_pred EecCCCceeEEecccCChH--HHHHHHHHHHHhhhCCCceeecccCcccccCchHHHHHHHHHHHHHHHHHHHHHHHHHH Confidence 8999999999888877664 6788888899999999999775544 3444555655566655 4577888888 Q ss_pred HHHHHHhhccchhhcchhhhhhhhhhHhhhhHHHHHHH-------HHHHHhCCCCCHHHHHHHh------CCCCCCCcce Q lcl|Aclame:pro 328 EQEMTYKLFLDSELDKGFYSKFNVDAILRADIKTRYEA-------YRTGIQGGFLKPNEARSKE------DLPPEAGGDR 394 (429) Q Consensus 328 ~~~l~~~ll~~~~~~~~~~~~fd~~~l~~~d~~~~~~~-------~~~~~~~g~~t~NE~R~~~------Gl~~~~~gD~ 394 (429) ...+...+. ...++.++| ..|...+.+++++. +.+++.+|+++++|+|+++ |++.++..|. T Consensus 447 ~~li~~~lg----~~~d~~ieF--npL~~~sekEkAEi~kk~Aea~~~lv~sGvispdEvR~~L~~~~~~g~~~l~ded~ 520 (862) T protein:vir:99 447 YLISRLSLG----IQHEIDVVM--EPVASMTAQQQADLNKTKAEGGKVLIDGGVISPDEERNRIRDDKRSGYNRLTKEDA 520 (862) T ss_pred HHHHHHhcC----CCCcceEEe--CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHhcCCcCCCCCCcccc Confidence 876654432 223445555 57777777766654 6788999999999999975 4444432221 Q ss_pred e----eeccccccccccccccCCCCCCCCCCCC----CCCCCC Q lcl|Aclame:pro 395 L----LVNGNMLPIDMAGQAYLKGGDTNGEVSK----EGNEGN 429 (429) Q Consensus 395 ~----~~~~n~~~~~~~~~~~~~~g~~~~~~~~----~~~~~n 429 (429) - ..+.+.......+.......+.+.+... ..++.+ T Consensus 521 E~d~~~~~e~~~~~e~~g~a~~~ap~de~~aga~~~~~e~d~~ 563 (862) T protein:vir:99 521 EETPGASPENLAAYQKAGAAQETASAKETQAGAAVTTAEGDQP 563 (862) T ss_pred cccCCCCcccccccccCCcccccccccccccccCCccccCCcc Confidence 1 0111111111111100000000000000 000000 No 111 >protein:vir:103860 Length: 528 # NCBI annotation: portal protein # Family: family:all:313 # MgeID: mge:1522 # MgeName: D3112 # Cross-refs: genbank:acc:NP_938234;genbank:gi:38229139;genbank:GeneID:2648175 Probab=99.83 E-value=1.9e-19 Score=123.22 Aligned_cols=409 Identities=13% Similarity=0.022 Sum_probs=236.8 Q ss_pred Cchhhhhhc-cccccc-ccccc--cCC-------------chHHHHHhhcCCCCccee----chhhhh-ccHHHHHHHHH Q lcl|Aclame:pro 1 MDSVKKFFN-FEKRQT-SQVIE--LNK-------------DDEKLLEWLGISPSTISV----KGKNAL-KVATVFACIKI 58 (429) Q Consensus 1 Mg~~~~~~~-~~~~~~-~~~~~--~~~-------------~~~~~~~~~~~~~~~~~~----~~~~a~-~~~~v~~~i~~ 58 (429) |+-+=..++ +.++.. .++.. ... ....+...+-....+... -.+... +.+.|.+|++. T Consensus 1 ~~~~~d~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~gltp~~l~~il~~a~~gd~~~~~~L~~~m~e~D~~i~s~l~~ 80 (528) T protein:vir:10 1 MAAIVDIYGNPLRTQQLRKQQTAHLAGLAKEFANHPAKGLTPAKLAHILIEAEQGHLQAQAELFMDMEERDAHLFAEMSK 80 (528) T ss_pred CCeeECCCCCccccccccchhhhhhhhhhhhhcccCCCCCCHHHHHHHHHhhhCCCHHHHHHHHHHHHhhChHHHHHHHH Confidence 765422233 222111 11100 000 000111111000000000 011122 46789999999 Q ss_pred HHHhhccCceEEEecCCceeee-eecchhhhhhcccCcCCCCHHHHHHHHHHHHHhhCCeEEEEeeCCC---CceEEEEe Q lcl|Aclame:pro 59 LSESVSKLPLKIYQEDEYGIQR-GTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRK---GKVQALWP 134 (429) Q Consensus 59 ia~~ia~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~PN~~~s~~~~~~~~~~~~l~~G~~~~~~~~~~~---g~~~~l~~ 134 (429) +...|.+++|.|...+++.... ....-+..+|...| .+.+++.. +.+.+++|-++.++++... -.+..+.+ T Consensus 81 Rk~av~~~~w~I~p~~~~~~~~~~~a~~v~~~l~~~~----~f~~~i~~-~lda~~~G~s~~Ei~w~~~~g~~~~~~~~~ 155 (528) T protein:vir:10 81 RKRAVLGLDWTIEPPRNASAAEKADAEYLHELLLDLE----GIEDLMLD-CMDGVGHGYSAIELDWSLQGREWLPQAFDH 155 (528) T ss_pred HHHHHhcCCceEecCCCCCHHHHHHHHHHHHHHhCCc----cHHHHHHH-HHhhhhhcceeEEEEEeecCCceeEEEeee Confidence 9999999999998765432211 11112333343222 23333333 3445779999999876543 34678999 Q ss_pred eCCcceEEEEcCCcceeeeeeEEEeecccCceEEEccceEEEeecCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 135 IDASKVTVYIDDVGLLNSKTKMWYVVNTGGQQRVLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYK 214 (429) Q Consensus 135 l~p~~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~evih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ 214 (429) .|+.++.+..++... ............+++...++.++.......+|.|.+..+.-..-......++...+.+ T Consensus 156 r~~~~f~~~~~~~~~-------l~~~~~~~~g~~l~~~k~iv~~~~~~~g~p~g~gLlr~~~w~~~fK~~~~~~w~~f~E 228 (528) T protein:vir:10 156 RPQSWFQLNPDDQDE-------LRLRDNSIAGEVLQPFGWIMHKPRSRSGYVARSGLFRVLAWPYLFKHYSTADLAEMLE 228 (528) T ss_pred ecccceeeccCCCcE-------EeccCCCCCceeecCCCeEEEeecCCCCCccccchHHHHHHHHHHHHhhHHHHHHHHH Confidence 999888765443211 1111122233556666655555566667788999999999999999999999999999 Q ss_pred ccCCcceEEEeCCCCCHHHHHHHHHHHHHHhcccccccceeecCCCceeEecCCC-hhHHHHHHHHHHHHHHHHHHhcCC Q lcl|Aclame:pro 215 QGLQVKGLVQYVGDLNEDAKKVFRENFESMSSGLQNSHRIALMPVGYQFQPISLN-MSDAQFLENTELTIRQIATAFGIK 293 (429) Q Consensus 215 ng~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~g~~~~~~~~vl~~g~~~~~~~~~-~~d~~~~e~~~~~~~~Ia~~fgvp 293 (429) .-|.|--+.+.+...++++.+.+.+.+.+..+. ..+|++.|++++-+..+ .....|.+..++.-++|+.+.- - T Consensus 229 ~yG~P~~igky~~~a~~~ek~~L~~al~~i~~~-----~~~iiP~~~~ie~~ea~~~~~~~f~~li~~~d~~Isk~iL-G 302 (528) T protein:vir:10 229 IYGLPIRLGKYPPGTPDEEKVTLLRAVTGLGHA-----AAGIIPESMSIDFQEASKGSAEPFMAMMRWCDDSMSKAIL-G 302 (528) T ss_pred HcCCCeEEEecCCCCCHHHHHHHHHHHHHHhhC-----cEEEecCCceeEEeecCCCChhHHHHHHHHHHHHHHHHHh-h Confidence 999999999999888999999998888776432 35777888777766532 2223478889999999998862 2 Q ss_pred hhhcCC-ccccccccH-HHHHHHHHHHHHhHHHHHHHHHHHHhhccchhhcc---------hhhhhhhhhhHhhhhHHHH Q lcl|Aclame:pro 294 MHQLND-LSKATLNNI-EQQQQQFYTDTLQATLTMYEQEMTYKLFLDSELDK---------GFYSKFNVDAILRADIKTR 362 (429) Q Consensus 294 ~~~l~~-~~~~~~~n~-~~~~~~~~~~~l~P~~~~i~~~l~~~ll~~~~~~~---------~~~~~fd~~~l~~~d~~~~ 362 (429) ..+-.. .+...+++. .+.........+.-.++.|++.||+.++....... .-+++|+.. ...|.+++ T Consensus 303 qtlTs~~~~g~~gS~Alg~vh~~v~~di~~aDa~~i~~tln~~li~~l~~~N~~~~~~~~~~p~~~~~~~--e~eDl~~~ 380 (528) T protein:vir:10 303 GTLTSQTSESGGGAYALGQVHNEVRHDLLAADARQLAATLSRDLLWPLLVLNRSGNLDARRAPRLVFDLK--DRADLAAM 380 (528) T ss_pred hhhhccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCccccceEEecCC--CcccHHHH Confidence 333211 111122222 23345566777888899999999987633221110 124555544 56788899 Q ss_pred HHHHHHHHhCCC-CCHHHHHHHhCCCCCCCcceeeeccccccccccccccCCCCCCCCCCCCC-CCCCC Q lcl|Aclame:pro 363 YEAYRTGIQGGF-LKPNEARSKEDLPPEAGGDRLLVNGNMLPIDMAGQAYLKGGDTNGEVSKE-GNEGN 429 (429) Q Consensus 363 ~~~~~~~~~~g~-~t~NE~R~~~Gl~~~~~gD~~~~~~n~~~~~~~~~~~~~~g~~~~~~~~~-~~~~n 429 (429) ++...++...|+ ++..++|+.+|+|.-..++.+..+....+....+.........-.+...+ ..+.+ T Consensus 381 a~~~~~L~~~G~~i~~~~i~e~~gip~p~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 449 (528) T protein:vir:10 381 ATSLPPLVKLGVQVPVNWVQEQLGIPLPANGEAVLGDQAGAGIAQLSRRPGPRIAALAQVIGPRYRDQE 449 (528) T ss_pred HHHHHHHHhCCCCCCHHHHHHHhCCCCCCCCcccccCCCcccccccCcccccccccccccccccccccc Confidence 999999999998 99999999999987656665554433222111111000000000011111 11111 No 112 >protein:vir:96068 Length: 765 # NCBI annotation: conserved hypothetical protein ORF017 # Family: family:all:297 # MgeID: mge:1597 # MgeName: F8 # Cross-refs: genbank:acc:YP_001294434;genbank:gi:149408331;genbank:GeneID:5237187 Probab=99.83 E-value=2.8e-20 Score=127.78 Aligned_cols=405 Identities=12% Similarity=0.088 Sum_probs=217.0 Q ss_pred Cchhhhhhcccccccccc---------ccc-------C---CchHHHHHhhc-CCCCcce--------------echh-h Q lcl|Aclame:pro 1 MDSVKKFFNFEKRQTSQV---------IEL-------N---KDDEKLLEWLG-ISPSTIS--------------VKGK-N 45 (429) Q Consensus 1 Mg~~~~~~~~~~~~~~~~---------~~~-------~---~~~~~~~~~~~-~~~~~~~--------------~~~~-~ 45 (429) |.-+.+++.+.......+ .+. . ...+.+..+.+ ...+... .... . T Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ds~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~gyql~al 116 (765) T protein:vir:96 37 MIKLGKIRGWNVEPEKAPVIRSVKDFLEPGLSVAMDSAYGDGPTPAAKAAAGGQNPYVVPTMLQDWYNSQGFIGYQACAI 116 (765) T ss_pred chhHHHHhhcccccccCCCCCCCCcccCcccceeccccccccccchHHHhhhccCccchhhHHHhhhcccCCccHHHHHH Confidence 554444444222110000 000 0 00111211111 1111110 0111 2 Q ss_pred hhccHHHHHHHHHHHHhhccCceEEEecCCceeeeeecchhhhhhcccCcCCCCHHHHHHHHHHHHHhhCCeEEEEeeC- Q lcl|Aclame:pro 46 ALKVATVFACIKILSESVSKLPLKIYQEDEYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFD- 124 (429) Q Consensus 46 a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~~~~~~~~~~~~~l~~~PN~~~s~~~~~~~~~~~~l~~G~~~~~~~~~- 124 (429) +.+++.+..+|+.+|+.+-+-.+.+...+++. . ......|+..-.. ....+-+...+.+.-++|.+|+++... T Consensus 117 Y~~~~l~rkiVd~pAeDa~R~g~~I~~~~~e~-~----~~~~~~l~~~~~r-l~v~~~l~ea~~~~RlyGga~i~i~i~~ 190 (765) T protein:vir:96 117 ISQHWLVDKACSMSGEDAARNGWELKSDGRKL-S----DEQSALIARRDME-FRVKDNLVELNRFKNVFGVRIALFVVES 190 (765) T ss_pred HHhCchhhhhhhcchHHhhcCCceeecCcccc-C----HHHHHHHHHHHHH-hhHHHHHHHHHHHhhhceeeEEEEEecc Confidence 33688999999999999988888885433211 1 1122222211111 123455556666678899998876432 Q ss_pred C---------------CCceEEEEeeCCcceEEEEc----CC--cceeeeeeEEEeecccCceEEEccceEEEeecCC-- Q lcl|Aclame:pro 125 R---------------KGKVQALWPIDASKVTVYID----DV--GLLNSKTKMWYVVNTGGQQRVLKPEEILHFKNGI-- 181 (429) Q Consensus 125 ~---------------~g~~~~l~~l~p~~v~~~~~----~~--~~~~~~~~~~~~~~~~g~~~~~~~~evih~~~~~-- 181 (429) . .|..+.|.+++|..+..... .+ ...++.... | ...| +.|-++.||||.... T Consensus 191 ~D~~~l~~PL~~~~I~kg~~kgl~vldp~~~~~~~v~e~~~Dp~sp~fg~P~~-y--~i~g--~~IH~SRli~~~g~~lp 265 (765) T protein:vir:96 191 DDPDYYEKPFNPDGIAPGSYKGISQIDPYWAMPQLTAESTADPSAEHFYEPDF-W--IISG--KKYHRSHLVVVRGPQPP 265 (765) T ss_pred cCcchhhccccccccccceeeEEEEechhhcccccchhccccccccccCccee-e--eecC--ceeccceEEEecCCCch Confidence 1 13456788888877665321 11 112222222 2 2233 346778899986332 Q ss_pred ----CCCcccccCHHHHHHHHHHHHHHHHHHHHHHHHccCCcceEEEeCCCCCHHHHHHHHHHHHHHhcccccccceeec Q lcl|Aclame:pro 182 ----TLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGDLNEDAKKVFRENFESMSSGLQNSHRIALM 257 (429) Q Consensus 182 ----~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~g~~~~~~~~vl 257 (429) +...++|.|.++.+...+............++........-+..-..+.. .+.+.++++......+| .+++++ T Consensus 266 d~lk~~~~~~G~Svlq~~yd~I~~~~~t~~~~a~Ll~k~~~~v~k~~~~~~l~~--~~~l~~r~~~~~~~r~n-~g~~~i 342 (765) T protein:vir:96 266 DILKPTYIFGGIPLTQRIYERVYAAERTANEAPLLAMSKRTSTIHVDVEKAIAN--EDAFNARLAFWIANRDN-HGVKVI 342 (765) T ss_pred hhhccccCccCccHHHHHHHHHHHHHHHHHHHHHHHHHhccceeeechHhhhcc--HHHHHHHHHHHHHhcCC-ceeEEe Confidence 33456799999999999999999998888888876655333222222222 23445555544444333 557888 Q ss_pred CCCceeEecCCChhHHHHHHHHHHHHHHHHHHhcCChhhcCCcc-ccccccHHHHHHHHHH-------HHHhHHHHHHHH Q lcl|Aclame:pro 258 PVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLS-KATLNNIEQQQQQFYT-------DTLQATLTMYEQ 329 (429) Q Consensus 258 ~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~fgvp~~~l~~~~-~~~~~n~~~~~~~~~~-------~~l~P~~~~i~~ 329 (429) +.+-+|+.++.+..++ .+.......+||.+.+||...|.+.+ .+..++.+...+.||. ..+.|.++.+-+ T Consensus 343 d~ee~~e~~s~~lsgl--~d~l~~~~~~iAaas~IP~t~LfGqsp~GlnATGe~D~~nYyD~I~s~Qe~~l~p~le~L~~ 420 (765) T protein:vir:96 343 GIDETMEQFDTNLSDF--DSVIMNQYQLVAAIAKTPATKLLGTSPKGFNATGEHETISYHEELESIQEHIFDPLLERHYL 420 (765) T ss_pred cCCcceeEEecccCCH--HHHHHHHHHHHHhhhCCCeeeeccCCcccccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHH Confidence 8899999998887765 47788889999999999998876544 3333455555555555 456677666666 Q ss_pred HHHHhhccchhhcchhhhhhhhhhHhhhhHHHHHH-------HHHHHHhCCCCCHHHHHHHhCCCCCCCcc-----eeee Q lcl|Aclame:pro 330 EMTYKLFLDSELDKGFYSKFNVDAILRADIKTRYE-------AYRTGIQGGFLKPNEARSKEDLPPEAGGD-----RLLV 397 (429) Q Consensus 330 ~l~~~ll~~~~~~~~~~~~fd~~~l~~~d~~~~~~-------~~~~~~~~g~~t~NE~R~~~Gl~~~~~gD-----~~~~ 397 (429) .|-+. ..+..+++++| ..|...+.+++++ ++.+++.+|+++++|+|++++.++.-+.+ .... T Consensus 421 li~~s----~~i~~d~~i~F--npL~~~sekEkAei~~k~Aea~~~~~~~Gvis~dEvR~~L~~~~~~g~~~l~d~~~e~ 494 (765) T protein:vir:96 421 LLAKS----ESIDVQLEIVW--NPVDSTTSQQQAELNNKKAATDEIYINSGVVSPDEVRERLRDDPRSGYNRLTDDQAET 494 (765) T ss_pred HHHHh----cCCCCcceEEe--CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHhccccCCCCCCCcccccc Confidence 55432 22333445555 6777777666655 47888999999999999998665431111 1111 Q ss_pred ccccccccccccccCCCCCCCCCCCCC-----------CCCCC Q lcl|Aclame:pro 398 NGNMLPIDMAGQAYLKGGDTNGEVSKE-----------GNEGN 429 (429) Q Consensus 398 ~~n~~~~~~~~~~~~~~g~~~~~~~~~-----------~~~~n 429 (429) .....|.+. ......++.+.+...+ ++.+. T Consensus 495 ~~~~~pe~~--~~~~~~~~~~~~~~~e~~~~~a~p~~~eg~~~ 535 (765) T protein:vir:96 495 EPGMSPENL--AELEKAGAQSAKAKGEAERAEAQAGAVEGAGD 535 (765) T ss_pred ccCCCcccc--ccccCCCcccccccCccccccCCCCccCCCCc Confidence 111111110 0000111111100000 01000 No 113 >protein:vir:99232 Length: 526 # NCBI annotation: putative portal protein # Family: family:all:313 # MgeID: mge:1649 # MgeName: DMS3 # Cross-refs: genbank:acc:YP_950451;genbank:gi:119953652;genbank:GeneID:4643092 Probab=99.83 E-value=2.8e-19 Score=122.28 Aligned_cols=408 Identities=12% Similarity=0.042 Sum_probs=238.7 Q ss_pred Cchhhhhhcc-ccccc-c--cccccCC-------------chHHHHHhhcCCCCccee----chhhhh-ccHHHHHHHHH Q lcl|Aclame:pro 1 MDSVKKFFNF-EKRQT-S--QVIELNK-------------DDEKLLEWLGISPSTISV----KGKNAL-KVATVFACIKI 58 (429) Q Consensus 1 Mg~~~~~~~~-~~~~~-~--~~~~~~~-------------~~~~~~~~~~~~~~~~~~----~~~~a~-~~~~v~~~i~~ 58 (429) |+.+=...+. .++.. . ++..... ....+...+-....+... -.+..+ +.+.|.+|++. T Consensus 1 ~~~~~d~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~gltp~~l~~iLr~a~~gd~~~~~~L~e~m~e~D~~i~s~l~~ 80 (526) T protein:vir:99 1 MAQIVDVYGNPIRTQQLREPQTSRLAGLAKEFAQHPAKGLTPAKLARILVEAEQGNLQAQAELFMDMEERDAHLFAEMSK 80 (526) T ss_pred CCeeECCCCCccccccccchhhhhhhhhhhhhcccCcCCCCHHHHHHHHHhhhCCCHHHHHHHHHHHHhhChHHHHHHHH Confidence 6654222221 22110 0 1100000 000111111000000000 011222 46889999999 Q ss_pred HHHhhccCceEEEecCCceee-eeecchhhhhhcccCcCCCCHHHHHHHHHHHHHhhCCeEEEEeeCCC-C--ceEEEEe Q lcl|Aclame:pro 59 LSESVSKLPLKIYQEDEYGIQ-RGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRK-G--KVQALWP 134 (429) Q Consensus 59 ia~~ia~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~PN~~~s~~~~~~~~~~~~l~~G~~~~~~~~~~~-g--~~~~l~~ 134 (429) +...|.+++|.|...+++... ......+..+|+..| .+.+++..++ +.+.+|-++.++++... | .+..+.+ T Consensus 81 Rk~av~~~~w~I~p~~~~~~~~~~~a~~v~~~l~~~~----~~~~~i~~~l-da~~~G~s~~Eivw~~~~g~~~~~~l~~ 155 (526) T protein:vir:99 81 RKRAILGLDWAVEPPRNASAAEKADADYLHELLLDLE----GLEDLLLDAL-DGIGHGYSCIELEWALQGREWMPLAFHH 155 (526) T ss_pred HHHHHhCCCceEecCCCCCHHHHHHHHHHHHHHhccc----CHHHHHHHHH-HhhhhcceeEEEEEeecCCceeEEEeee Confidence 999999999999876544321 111122334443333 3555555544 56789999999976543 3 4678999 Q ss_pred eCCcceEEEEcCCcceeeeeeEEEeecccCceEEEccceEEEeecCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 135 IDASKVTVYIDDVGLLNSKTKMWYVVNTGGQQRVLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYK 214 (429) Q Consensus 135 l~p~~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~evih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ 214 (429) .++.++.+..+.... ............+++...+..++.......+|.|.+..+.-.........++...+.+ T Consensus 156 r~~~~f~~~~~~~~~-------l~~~~~~~~g~~l~~~k~i~~~~~~~~g~p~g~gLlr~~~w~~~fK~~~~~~w~~f~E 228 (526) T protein:vir:99 156 RPQSWFQLNPEDQNE-------LRLRDNSPAGEALQPFGWIIHRPRARSGYVARSGLFRVLAWPYLFRHYATSDLAEMLE 228 (526) T ss_pred ecccceeeccCCCcE-------EEecCCCCCceeecCCCeEEEeecCCcCCccccchHHHHHHHHHHHHhhHHHHHHHHH Confidence 999888765444211 1111222334556766554445555667789999999999999999999999999999 Q ss_pred ccCCcceEEEeCCCCCHHHHHHHHHHHHHHhcccccccceeecCCCceeEecCCC-hhHHHHHHHHHHHHHHHHHHhcCC Q lcl|Aclame:pro 215 QGLQVKGLVQYVGDLNEDAKKVFRENFESMSSGLQNSHRIALMPVGYQFQPISLN-MSDAQFLENTELTIRQIATAFGIK 293 (429) Q Consensus 215 ng~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~g~~~~~~~~vl~~g~~~~~~~~~-~~d~~~~e~~~~~~~~Ia~~fgvp 293 (429) .-|.|--+.+.+...++++.+.+.+.+.+..+ ...++++.|++++-+..+ .....|.+..++.-++|+.++ +- T Consensus 229 ~yG~P~~igky~~~a~~~ek~~L~~av~~i~~-----d~~~iiP~~~~ie~~ea~~~~~~~f~~li~~~d~~Isk~i-LG 302 (526) T protein:vir:99 229 IYGLPIRLGKYPPGTADEEKATLLRAVTGLGH-----AAAGIIPETMAIDFQQAAQGSSEPFLAMMRQSEDAISKAV-LG 302 (526) T ss_pred HcCCceEEEecCCCCCHHHHHHHHHHHHHHhh-----CcEEEecCCceeEEeecCCCCHHHHHHHHHHHHHHHHHHH-hh Confidence 99999999999988899999999888877633 235778888777766532 223347888899999999885 22 Q ss_pred hhhcCC---ccccccccHHHHHHHHHHHHHhHHHHHHHHHHHHhhccchhhcc---------hhhhhhhhhhHhhhhHHH Q lcl|Aclame:pro 294 MHQLND---LSKATLNNIEQQQQQFYTDTLQATLTMYEQEMTYKLFLDSELDK---------GFYSKFNVDAILRADIKT 361 (429) Q Consensus 294 ~~~l~~---~~~~~~~n~~~~~~~~~~~~l~P~~~~i~~~l~~~ll~~~~~~~---------~~~~~fd~~~l~~~d~~~ 361 (429) ..+-.. +..++++. .+.........+.-.++.|++.||+.++....... .-+++|+.. ...|.++ T Consensus 303 qtlTs~~~~g~~gS~a~-g~vh~~v~~di~~aDa~~i~~tln~~Li~~l~~~N~~~~~~~~~~p~~~~~~~--e~eDl~~ 379 (526) T protein:vir:99 303 GTLTSTTSQSGGGAFAL-GQVHNEVRHDLLASDARQLAATLSRDLLWPLLVLNRPGSPDVRRAPRLVFDLR--EQADITS 379 (526) T ss_pred hhhccccccCcchhhhH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcCCccccceEEeCCC--CcccHHH Confidence 332211 11123322 23345556667778889999999887643221111 123555543 5778899 Q ss_pred HHHHHHHHHhCCC-CCHHHHHHHhCCCCCCCcceeeeccccccccccccccCCCCCCCCCCCCCCCCCC Q lcl|Aclame:pro 362 RYEAYRTGIQGGF-LKPNEARSKEDLPPEAGGDRLLVNGNMLPIDMAGQAYLKGGDTNGEVSKEGNEGN 429 (429) Q Consensus 362 ~~~~~~~~~~~g~-~t~NE~R~~~Gl~~~~~gD~~~~~~n~~~~~~~~~~~~~~g~~~~~~~~~~~~~n 429 (429) +++...++...|+ ++..++|+++|+|.-..++.++.+....+..................+...+.+. T Consensus 380 ~a~~~~~L~~~G~~i~~~~i~e~~Gip~~~~~e~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 448 (526) T protein:vir:99 380 MAQSIPALVNVGLEIPSAWVYDKLGIPQPAKNEPVLRSAAQPAILSRQHGQRVAALATIVGPRYGDQQA 448 (526) T ss_pred HHHHHHHHHhCCCccCHHHHHHHhCCCCCCCcccccCCCCCCcccccccccccccccccccccCcchhh Confidence 9999999999998 8999999999998765555554433211111100000000000111111111111 No 114 >protein:vir:79538 Length: 502 # NCBI annotation: putative portal protein # Family: family:all:47 # MgeID: mge:1871 # MgeName: cdtI # Cross-refs: genbank:acc:YP_001272517;genbank:gi:148609386;genbank:GeneID:5204374 Probab=99.82 E-value=5.2e-21 Score=131.78 Aligned_cols=425 Identities=10% Similarity=-0.008 Sum_probs=235.4 Q ss_pred Cchhhhhhccccccccc----------ccccCCchHHHHHhhcCCCCcc-ee----------chhhhhccHHHHHHHHHH Q lcl|Aclame:pro 1 MDSVKKFFNFEKRQTSQ----------VIELNKDDEKLLEWLGISPSTI-SV----------KGKNALKVATVFACIKIL 59 (429) Q Consensus 1 Mg~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~-~~----------~~~~a~~~~~v~~~i~~i 59 (429) |+||+|+.+++....+. ...... ......|.....+.. .+ +.+-+..+|.+..+|+.+ T Consensus 1 mn~~dr~i~~~sP~~~~~R~~ar~~~~~y~aa~-~~r~~~~~~~~~s~~~~~~~~~~~lr~RaRdl~rNn~~a~~av~~~ 79 (502) T protein:vir:79 1 MAILDDVIGVFSPGWKAARLRSRAVIQAYEAVK-TTRTHKARRENRTADQLSQYGAVSLREQARYLDNNHDLVIGVFDKL 79 (502) T ss_pred CchHhhHHhhcChHHHHHHHhhHHHHhhccccC-cccccCCCCCCCChHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHH Confidence 99999988765421110 000000 000001111000000 00 012233578899999988 Q ss_pred HHhhccC-ceEEE--ecCCceee-eeecc---hhhhhhc--ccCcCCCCHHHHHHHHHHHHHhhCCeEEEEeeCCC---- Q lcl|Aclame:pro 60 SESVSKL-PLKIY--QEDEYGIQ-RGTKH---YLNNLLR--LRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRK---- 126 (429) Q Consensus 60 a~~ia~~-~~~~~--~~~~~~~~-~~~~~---~~~~~l~--~~PN~~~s~~~~~~~~~~~~l~~G~~~~~~~~~~~---- 126 (429) .+.+-.. -+.+. ....+... ..... .++..+. ......++..++...++..++..|++|+.+..... T Consensus 80 ~~nvVG~ggi~~~~~~~~~~~~~~~~~~~~ie~~w~~Wa~~~D~~g~~~f~~~q~l~~r~~~~dGE~f~~~~~~~~~~~~ 159 (502) T protein:vir:79 80 EERVVGKNGIIVEPHPVLRNGAIARDLAAEIRTRWSEWSVSPEVTGQFTRPMLERLMLRTWLRDGEVFAQMVSGRINSLT 159 (502) T ss_pred HHhhccCCceeeeeccCCCChhHHHHHHHHHHHHHHHhhcCcCccccCCHHHHHHHHHHHHHhCCceEEEEeecccCccC Confidence 8777543 23222 11111100 00001 1222222 23444678899999999999999999999866442 Q ss_pred ---CceEEEEeeCCcceEEEEcCCcc--------eeeeeeEEEeecc------cCceEEEccceEEEeecCCCCCccccc Q lcl|Aclame:pro 127 ---GKVQALWPIDASKVTVYIDDVGL--------LNSKTKMWYVVNT------GGQQRVLKPEEILHFKNGITLDGLVGV 189 (429) Q Consensus 127 ---g~~~~l~~l~p~~v~~~~~~~~~--------~~~~~~~~~~~~~------~g~~~~~~~~evih~~~~~~~~~~~G~ 189 (429) +.+..|-.|+|+++....++... .......|+.... ....+.+++++|+|+..+...+...|+ T Consensus 160 ~g~~~~l~lq~iepd~l~~~~~~~~~i~~GVe~d~~Gr~~aY~i~~~hPgd~~~~~~~rvpA~~vlH~f~~~r~gQ~RGi 239 (502) T protein:vir:79 160 PSAGVHFWLEALEPDFIPMTSDESNRLNQGVFVDDWGRPEKYLVYKSRPVSGRQMETKEVDAERMLHLKFVRRLHQMRGT 239 (502) T ss_pred CCcccceEEEEecchhcCCCCCCCCeeEeeeEECCCCceEEEEEeecCCCCCcccceeEechhheEEeecccCCccccCC Confidence 23568899999888532221110 0112222332221 123467999999999988888889999 Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHccCCcceEEEeCCCCCHHHHHHHHHHHHHHhccccccccee-ecCCCceeEecCC Q lcl|Aclame:pro 190 PTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGDLNEDAKKVFRENFESMSSGLQNSHRIA-LMPVGYQFQPISL 268 (429) Q Consensus 190 s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~g~~~~~~~~-vl~~g~~~~~~~~ 268 (429) |.+..+...+..............+-.+...++++.+.+........-.. -..... .-..|.++ .|..|.+++..+. T Consensus 240 s~lapvl~~l~~l~~~~dael~~a~i~A~~~~fi~~~~~~~~~~~~~~~~-~~~~~~-~l~pG~i~~~L~pGe~i~~~~p 317 (502) T protein:vir:79 240 SLLSGVLIRLSALKEYEDSELTAARIAAALGMYIRKGDGQSYEPDGNGSK-ENEREL-TIQPGIIYDDLKPGEEIGMVKS 317 (502) T ss_pred chHHHHHHHHHHHhHHHHHHHHHHHHhhhheeeeecCCCcccccccCCCC-Cccccc-cccCCccccccCCCceeeeeCC Confidence 99999999999998888888888888889999998754322111000000 000000 11235544 5889999988876 Q ss_pred ChhHHHHHHHHHHHHHHHHHHhcCChhhcCCccccccccHHHHHHHHHHH-----------HHhHHHHH-HHHHHHHhhc Q lcl|Aclame:pro 269 NMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKATLNNIEQQQQQFYTD-----------TLQATLTM-YEQEMTYKLF 336 (429) Q Consensus 269 ~~~d~~~~e~~~~~~~~Ia~~fgvp~~~l~~~~~~~~~n~~~~~~~~~~~-----------~l~P~~~~-i~~~l~~~ll 336 (429) +-....|.+..+...+.||.++|||.+.|.+.-+.|||+..+....+++. .+.|+.+. ++.++-...+ T Consensus 318 ~~p~~~~~~f~~~~lr~iaaglGi~ye~lt~D~s~nySs~R~~~~e~~r~~~~~q~~~~~~~~~pi~~~~l~~a~l~G~i 397 (502) T protein:vir:79 318 DRPNPNLETFRNGQLRAVAAGSRLSFSSTARNYNGTYSAQRQELVESTDGYLILQDWFIGAVTRPMYRAWLKQAVASGVI 397 (502) T ss_pred CCCCCCHHHHHHHHHHHHHhhcCCCHHHHhccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC Confidence 65556688899999999999999999988765456888877665555433 33332222 2333322222 Q ss_pred cchhhc---chhhhhhhhhhHhhhhHHHHHHHHHHHHhCCCCCHHHHHHHhCCCCCCCc----------ceeeecccccc Q lcl|Aclame:pro 337 LDSELD---KGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEAGG----------DRLLVNGNMLP 403 (429) Q Consensus 337 ~~~~~~---~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~Gl~~~~~g----------D~~~~~~n~~~ 403 (429) ..+... .-..+.|-.-.....|+.+.+++...++.+|+.|.-++-++.|.++.+-. +++=++....| T Consensus 398 ~~p~~~~~~~~~~~~W~~p~~~~iDP~Ke~~a~~~~i~~Gl~t~~~~~a~~G~D~~~v~~q~a~e~~~~~~~Gl~~~~~~ 477 (502) T protein:vir:79 398 RLPRDLDRSSLYTAVYSGPVMPWIDPVKEAEAWKIQIRGGAATESDWVRAGGRNPDDVKRRRKAEIDENRKLDLVFDTDP 477 (502) T ss_pred CCCCCCCchhhcceeeecCCccccChHHHHHHHHHHHHcCCCCHHHHHHHcCCCHHHHHHHHHHHHHHHHHcCCCCCCCC Confidence 211110 01122233334445789999999999999999999999888999875321 11111221111 Q ss_pred ccccccccCCCCCCCCCCCCCCCCC Q lcl|Aclame:pro 404 IDMAGQAYLKGGDTNGEVSKEGNEG 428 (429) Q Consensus 404 ~~~~~~~~~~~g~~~~~~~~~~~~~ 428 (429) .........++...+.++.+...|+ T Consensus 478 ~~~~~~~~~~~~~~e~~~~~~~~e~ 502 (502) T protein:vir:79 478 ASDKGGSSAATKRQEPQHTDDQSEE 502 (502) T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCC Confidence 1111111111111111111111111 No 115 >protein:vir:104338 Length: 422 # NCBI annotation: putative portal protein # Family: family:all:297 # MgeID: mge:1593 # MgeName: RTP # Cross-refs: genbank:acc:YP_398967;genbank:gi:81343951;genbank:GeneID:3778870 Probab=99.82 E-value=1.4e-20 Score=129.43 Aligned_cols=381 Identities=10% Similarity=0.078 Sum_probs=214.2 Q ss_pred CchhhhhhcccccccccccccCCchHHHHHhhcCCCCcceechhh-hhccHHHHHHHHHHHHhhccCceEEEecCCceee Q lcl|Aclame:pro 1 MDSVKKFFNFEKRQTSQVIELNKDDEKLLEWLGISPSTISVKGKN-ALKVATVFACIKILSESVSKLPLKIYQEDEYGIQ 79 (429) Q Consensus 1 Mg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~~~ 79 (429) |-..+.+.+.+......... ++...+........ +.+++.+..+|+.+|+.+-+-.|.+...++.. T Consensus 1 ~~~~D~~~n~~~gg~~~~~~-----------~~~~~~~~~~~l~a~Y~~~~l~~~~Vd~~aed~~r~g~~i~~~~~~~-- 67 (422) T protein:vir:10 1 MVKTDSYANIFLGGSDGSEI-----------YGSLQNQAPTILASLYADNALVRRIIDTIPETALAAGFHIDGIDDEP-- 67 (422) T ss_pred CccchhhHHHHcCCCCCccc-----------cCcccccCHHHHHHHHHhChhhHHHHhhhhHHHhcCCccccCCCHHH-- Confidence 65555544433211110000 00000000011122 34688999999999999988888875332211 Q ss_pred eeecchhhhhhcccCcCCCCHHHHHHHHHHHHHhhCCeEEEEee-C---------CCCceEEEEeeCCcceEEEEcC--- Q lcl|Aclame:pro 80 RGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEF-D---------RKGKVQALWPIDASKVTVYIDD--- 146 (429) Q Consensus 80 ~~~~~~~~~~l~~~PN~~~s~~~~~~~~~~~~l~~G~~~~~~~~-~---------~~g~~~~l~~l~p~~v~~~~~~--- 146 (429) .+...|. + ....+-+...+.+..++|.+++++.. + ..|....|.++++..|++.... T Consensus 68 -----~~~~~~~-~----l~~~~~l~~a~~~~rl~G~a~i~i~v~d~~~~~~Pl~~~g~~~~l~v~d~~~i~~~~~~~dp 137 (422) T protein:vir:10 68 -----AFWSRWD-D----LEMTQNINDAWSWARLFGGAAIVAIVKDNRALTSPVREGAELETVRVYDRTQVKVQTREENP 137 (422) T ss_pred -----HHHHHHH-H----hhHHHHHHHHHHhhccccceEEEEEecCCCCccccccccCceeeEEeeccccccchhcccCc Confidence 1111121 1 12244455566666889999988764 2 2466778999999988764321 Q ss_pred CcceeeeeeEEEeecc-cCceEEEccceEEEeecC------CCCCcccccCHHHH-HHHHHHHHHHHHHHHHHHHHccCC Q lcl|Aclame:pro 147 VGLLNSKTKMWYVVNT-GGQQRVLKPEEILHFKNG------ITLDGLVGVPTMEY-LKSTLENSASADKFINNFYKQGLQ 218 (429) Q Consensus 147 ~~~~~~~~~~~~~~~~-~g~~~~~~~~evih~~~~------~~~~~~~G~s~~~~-~~~~i~~~~~~~~~~~~~~~ng~~ 218 (429) ....++....|..... ++..+.+-++.||||... .+....+|.|++.. +...+............++..... T Consensus 138 ~s~~fg~P~~y~v~~~~~~~~~~iH~SRli~~~g~~~p~~~~~~~~~~G~S~l~~~~~~~i~~~~~~~~~~~~l~~~~~~ 217 (422) T protein:vir:10 138 RNARFGEPLTYRITTNESDMFYDVHYSRIHIIDGERIPNVMRRQNDGWGRSVLSSDILDSIKDYTNCERLATQLLKRKQQ 217 (422) T ss_pred cccccCcceEEEEecCCCCcceeeccceeEEeCCCCchhhhcccCCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcc Confidence 1122233333333222 233467788889998532 24456789999986 678888888888888888776654 Q ss_pred cceEEEeCC---CC-CHHHHHHHHHHHHHHhcccccccceeecCCCceeEecCCChhHHHHHHHHHHHHHHHHHHhcCCh Q lcl|Aclame:pro 219 VKGLVQYVG---DL-NEDAKKVFRENFESMSSGLQNSHRIALMPVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKM 294 (429) Q Consensus 219 ~~~~~~~~~---~~-~~e~~~~~~~~~~~~~~g~~~~~~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~fgvp~ 294 (429) . +++++. -. +.....++++++........+.+.+++..++-+|++++.+...+ .+.......+||.+.|||. T Consensus 218 ~--v~~~~~l~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~l~~~~e~~e~~~~~lsgl--~~~~~~~~~~iaaa~~IP~ 293 (422) T protein:vir:10 218 A--VWKAKGLAELCDDSEGFGAARLRLAQVDNNSGVGQAIGIDAESEEYSVLNSDIGGI--DAFLDKKFDRIVALSGIHE 293 (422) T ss_pred c--cccchhHHHhcCCccchHHHHHHHHHHHHhcCCccceeEecCCcceEEEecccCCh--HHHHHHHHHHHHhhhCCCe Confidence 4 333332 11 23344445555555544434556677777788999988887765 5788999999999999999 Q ss_pred hhcCCcccccc-ccHHHHHHHHHH-------HHHhHHHHHHHHHHHHhhccchhhcchhhhhhhhhhHhhhhHHH----- Q lcl|Aclame:pro 295 HQLNDLSKATL-NNIEQQQQQFYT-------DTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAILRADIKT----- 361 (429) Q Consensus 295 ~~l~~~~~~~~-~n~~~~~~~~~~-------~~l~P~~~~i~~~l~~~ll~~~~~~~~~~~~fd~~~l~~~d~~~----- 361 (429) ..|.+.+.+.. ++.++..+.|+. .-+.|.+..+-..+ . +..+++++|+ .|...+.++ T Consensus 294 t~L~G~s~~Glnatgd~d~~~yyd~i~~~Qe~~l~p~l~~l~~~i----~----~s~~~~~~f~--pL~~~sekekaei~ 363 (422) T protein:vir:10 294 IILKNKNVGGVSSSQNTALETFHKLVDRKRNAELLPILEFLIPFI----V----NAEEWSVEFN--PLAQESSKDKAEIL 363 (422) T ss_pred eeeccCCcccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHh----c----ccCCcEEEeC--CCCCCCHHHHHHHH Confidence 98865544333 344444455554 34556555554433 1 1235566664 555555554 Q ss_pred --HHHHHHHHHhCCCCCHHHHHHHhCCCCCCCcceeeeccccccccccccccCCCCCCCCCCCCCCCCCC Q lcl|Aclame:pro 362 --RYEAYRTGIQGGFLKPNEARSKEDLPPEAGGDRLLVNGNMLPIDMAGQAYLKGGDTNGEVSKEGNEGN 429 (429) Q Consensus 362 --~~~~~~~~~~~g~~t~NE~R~~~Gl~~~~~gD~~~~~~n~~~~~~~~~~~~~~g~~~~~~~~~~~~~n 429 (429) .++++.+++.+|+++++|+|+.|--.....+ +..+..+.+.. .....+ .+.+..++| T Consensus 364 ~~~a~a~~~~~~~g~i~~~e~r~~L~~~~~~~~----~~~~~~~~~~~-----~~~~~~--~~~~~~~~d 422 (422) T protein:vir:10 364 EKNVNSIAALIAAGAMDIDEARDTLRTIAPEVK----INDGSVETEVT-----ISETSN--DPLEVPTDD 422 (422) T ss_pred HHHHHHHHHHHhcCCCCHHHHHHHhhhhccccc----CCCCCCccccc-----hhhcCC--CCCCCCCCC Confidence 4556788899999999999998843322111 11122221111 000111 111111111 No 116 >protein:vir:107662 Length: 427 # NCBI annotation: putative portal protein # Family: family:all:297 # MgeID: mge:1518 # MgeName: T1 # Cross-refs: genbank:acc:YP_003893;genbank:gi:45686310;genbank:GeneID:2773002 Probab=99.82 E-value=1e-20 Score=130.22 Aligned_cols=380 Identities=13% Similarity=0.109 Sum_probs=208.3 Q ss_pred Cchhh--hhhcccccccccccccCCchHHHHHhhcCCCCcceechhh-hhccHHHHHHHHHHHHhhccCceEEEecCCce Q lcl|Aclame:pro 1 MDSVK--KFFNFEKRQTSQVIELNKDDEKLLEWLGISPSTISVKGKN-ALKVATVFACIKILSESVSKLPLKIYQEDEYG 77 (429) Q Consensus 1 Mg~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~ 77 (429) |..|+ .+-++......... .+...+...+.... +.+++.+..+|+.+|+.+-+..+.+...+++. T Consensus 1 ~~~~~~d~~~~~~~~~~~~~~------------~~~~~~~~~~~l~a~Y~~~~l~~~~Vd~~aed~~r~g~~i~g~~~~~ 68 (427) T protein:vir:10 1 MKIVKHDGYNDIFNGGADGSP------------KPFFMSDASYHVGSFYNDNATAKRIVDVIPEEMVTAGFKMSGVKDEK 68 (427) T ss_pred CCccccchHHHHhhcCCCCcc------------cCccccCchHHHHHHHHcCchhhhhhccchHHhhcCCccccCccHHH Confidence 44432 11111100000000 00001111112222 34688999999999999999888875432211 Q ss_pred eeeeecchhhhhhcccCcCCCCHHHHHHHHHHHHHhhCCeEEEEee----------CCCCceEEEEeeCCcceEEEEcC- Q lcl|Aclame:pro 78 IQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEF----------DRKGKVQALWPIDASKVTVYIDD- 146 (429) Q Consensus 78 ~~~~~~~~~~~~l~~~PN~~~s~~~~~~~~~~~~l~~G~~~~~~~~----------~~~g~~~~l~~l~p~~v~~~~~~- 146 (429) .+...+. + ....+-+...+.+..++|.+++++.. ...|.+..|.++++..|++.... T Consensus 69 -------~~~~~~~-~----l~~~~~l~~a~~~~rl~G~a~i~i~v~d~~~l~~p~~~~g~l~~l~v~d~~~~~~~~~~~ 136 (427) T protein:vir:10 69 -------EFKSLWD-S----YKLDSSLVDLLCWARLYGGAAMVAIIKDNRMLTSQAKPGAKLEGVRVYDRFAITVEKRVT 136 (427) T ss_pred -------HHHHHHH-H----hhHHHHHHHHHHhccccceeEEEEEecCCCccccccCCCcceeEEEEechhccccccccc Confidence 1111121 1 12334455666667889999988743 23567889999999888764322 Q ss_pred --CcceeeeeeEEEeecccC-ceEEEccceEEEeecC------CCCCcccccCHHH-HHHHHHHHHHHHHHHHHHHHHcc Q lcl|Aclame:pro 147 --VGLLNSKTKMWYVVNTGG-QQRVLKPEEILHFKNG------ITLDGLVGVPTME-YLKSTLENSASADKFINNFYKQG 216 (429) Q Consensus 147 --~~~~~~~~~~~~~~~~~g-~~~~~~~~evih~~~~------~~~~~~~G~s~~~-~~~~~i~~~~~~~~~~~~~~~ng 216 (429) ....++....|.....++ ..+.+-++.|+||... .+.+..+|.|++. .+...+............++... T Consensus 137 dp~s~~fg~P~~y~v~~~~~~~~~~iH~SRli~~~g~~~p~~~~~~~~~~G~S~l~~~~~~~i~~~~~~~~~~~~l~~k~ 216 (427) T protein:vir:10 137 NARSPRYGEPEIYKVSPGDNMQPYLIHHSRVFIADGERVAQQARKQNQGWGASVLNKSLIDAICDYDYCESLATQILRRK 216 (427) T ss_pred CccccccCcceEEEEecCCCCcceEEccccEEEecCCCchhhhcccCCcccchhhhHHHHHHHHHHHHHHHHHHHHHHHh Confidence 111223333333322222 3367888899998632 2345678999986 57787888888888888877765 Q ss_pred CCcceEEEeCCC---C-CHHHHHHHHHHHHHHhcccccccceeecCCCceeEecCCChhHHHHHHHHHHHHHHHHHHhcC Q lcl|Aclame:pro 217 LQVKGLVQYVGD---L-NEDAKKVFRENFESMSSGLQNSHRIALMPVGYQFQPISLNMSDAQFLENTELTIRQIATAFGI 292 (429) Q Consensus 217 ~~~~~~~~~~~~---~-~~e~~~~~~~~~~~~~~g~~~~~~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~fgv 292 (429) ... ++++++- + +.+...++++++........+.+.+++...+-+|+.++.+...+ .+.......+||.+.+| T Consensus 217 ~~~--v~k~~~l~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~l~~~~e~~e~~~~~lsgl--~~~~~~~~~~iaaa~~I 292 (427) T protein:vir:10 217 QQA--VWKVKGLAEMCDDDDAQYAARLRLAQVDDNSGVGRAIGIDAETEEYDVLNSDISGV--PEFLSSKMDRIVSLSGI 292 (427) T ss_pred ccc--cccchhHHHHhcCccchHHHHHHHHHHHHhcCcccceeeecCCCceeEEecccCCh--HHHHHHHHHHHHhhhCC Confidence 443 3343321 1 12223334444444333334456677777778999888777765 47788899999999999 Q ss_pred ChhhcCCcccccc-ccHHHHHHHHHH-------HHHhHHHHHHHHHHHHhhccchhhcchhhhhhhhhhHhhhhHHHH-- Q lcl|Aclame:pro 293 KMHQLNDLSKATL-NNIEQQQQQFYT-------DTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAILRADIKTR-- 362 (429) Q Consensus 293 p~~~l~~~~~~~~-~n~~~~~~~~~~-------~~l~P~~~~i~~~l~~~ll~~~~~~~~~~~~fd~~~l~~~d~~~~-- 362 (429) |...|.+.+.+-. ++-++..+.|+. ..+.|.++.+-+.+ . +..+++++|+ .|...+.+++ T Consensus 293 P~t~L~G~sp~Glnstgd~D~~nyyd~i~~~Qe~~l~p~l~~l~~~i----~----~s~~~~~~f~--pL~~~s~kEkae 362 (427) T protein:vir:10 293 HEIIIKNKNVGGVSASQNTALETFYKLVDRKREEDYRPLLEFLLPFI----V----DEEEWSIEFE--PLSVPSKKEESE 362 (427) T ss_pred CeeeeccCCccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHh----h----cCCCcEEEeC--CCCCCCHHHHHH Confidence 9998865544433 344445555554 34556655554433 1 1235566664 5555555544 Q ss_pred -----HHHHHHHHhCCCCCHHHHHHHh----CCCCCCCcceeeeccccccccccccccCCCCCCCCCCCCCCCCCC Q lcl|Aclame:pro 363 -----YEAYRTGIQGGFLKPNEARSKE----DLPPEAGGDRLLVNGNMLPIDMAGQAYLKGGDTNGEVSKEGNEGN 429 (429) Q Consensus 363 -----~~~~~~~~~~g~~t~NE~R~~~----Gl~~~~~gD~~~~~~n~~~~~~~~~~~~~~g~~~~~~~~~~~~~n 429 (429) ++++.+++.+|+++++|+|+.+ +.+.+.+++.. .........++++..+++ +.+| | T Consensus 363 i~~~~a~a~~~~~~~gvi~~~e~r~~L~~~~~~~~~~~~~~~----~~e~~~~~~e~~p~~~e~------~~d~-~ 427 (427) T protein:vir:10 363 ITKNNVESVTKAITEQIIDLEEARDTLRSIAPEFKLKDGNNI----NIREPEETTEPEPGLGEK------LEDE-N 427 (427) T ss_pred HHHHHHHHHHHHHhcCCCCHHHHHHHHHhhhccccCCCCccc----cccccchhcCCCCCCCCC------CCCC-C Confidence 5567888999999999999876 33333332211 010111111111111111 1111 1 No 117 >protein:vir:108215 Length: 469 # NCBI annotation: gp6 # Family: family:all:2372 # MgeID: mge:2004 # MgeName: Giles # Cross-refs: genbank:acc:YP_001552335;genbank:gi:160700655;genbank:GeneID:5758935 Probab=99.81 E-value=7.4e-19 Score=120.00 Aligned_cols=409 Identities=11% Similarity=0.046 Sum_probs=242.6 Q ss_pred Cchhhhhhccccccccccc-cc-----C--CchHHHHHhhcC---CCCccee-chhhhh-ccHHHHHHHHHHHHhhccCc Q lcl|Aclame:pro 1 MDSVKKFFNFEKRQTSQVI-EL-----N--KDDEKLLEWLGI---SPSTISV-KGKNAL-KVATVFACIKILSESVSKLP 67 (429) Q Consensus 1 Mg~~~~~~~~~~~~~~~~~-~~-----~--~~~~~~~~~~~~---~~~~~~~-~~~~a~-~~~~v~~~i~~ia~~ia~~~ 67 (429) |-= +.+...+. .. . .+...+.+-... .+....+ ..+..+ +-+.|.+|++.+...|.+++ T Consensus 1 ~~~--------~~~~~~p~~~~g~~~~~~~~~~~~~~~~~e~~~~lr~~~~~~ly~~m~e~D~~i~s~l~~rk~av~~~~ 72 (469) T protein:vir:10 1 MTE--------RVKTAAPVSEAGYVFGSGVVDGWTVWDPFEQTPELQWPQSVAVYSRMDNEDSRVTSLLEAISLPIRSTP 72 (469) T ss_pred CCC--------cccCCCCccchhhhhhcccccchhhccccccccccccccchHHHHHHHhhChHHHHHHHHHHHHHhcCC Confidence 111 11110010 00 0 000011100000 0000011 123444 47889999999999999999 Q ss_pred eEEEecCCceeeeeecchhhhhhcccC-------------cCCCCHHHHHHHHHHHHHhhCCeEEEEeeCCC-----Cc- Q lcl|Aclame:pro 68 LKIYQEDEYGIQRGTKHYLNNLLRLRP-------------NPYMSSMNFFGSLEAQKNLYGNSYANIEFDRK-----GK- 128 (429) Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~l~~~P-------------N~~~s~~~~~~~~~~~~l~~G~~~~~~~~~~~-----g~- 128 (429) |+|...+++... ...+...|. .+ +-..+|.+++..++.+.+.+|-++.++++... |. T Consensus 73 w~v~p~~~~~e~---~~~~~~~L~-~~~~~~~~~~~~~~~~~~~~w~~~l~~~l~~a~~~G~s~~Eivw~~~~~~~dG~~ 148 (469) T protein:vir:10 73 WRIRANGASDEV---TEFVSRNLM-VPIDGEDDVRNPGRSRGRFSWAEHLEEVTSPTLQFGHAVFEQVYRPRNQSPDGRF 148 (469) T ss_pred ceEecCCCCHHH---HHHHHHHHH-hhhhhhhhhhhhhhhhccccHHHHHHHHHHHhhhhCceeeeeeeecccccCCCce Confidence 999765543211 122233332 11 12346888888888888889999999987533 32 Q ss_pred -eEEEEeeCCcceEE-EEcCCc-ceeeeee------EEEeecccCceEEEccceEEEeecCCCCCcccccCHHHHHHHHH Q lcl|Aclame:pro 129 -VQALWPIDASKVTV-YIDDVG-LLNSKTK------MWYVVNTGGQQRVLKPEEILHFKNGITLDGLVGVPTMEYLKSTL 199 (429) Q Consensus 129 -~~~l~~l~p~~v~~-~~~~~~-~~~~~~~------~~~~~~~~g~~~~~~~~evih~~~~~~~~~~~G~s~~~~~~~~i 199 (429) +..|.+.|+.++.. ..+.+. ....+.. ....+..++....+++...|+.++.......+|.|.+..+.-.. T Consensus 149 ~~~~l~~rp~~~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lp~~k~i~~~~~~~~g~p~g~gLlr~~~~~~ 228 (469) T protein:vir:10 149 WLRKLAPRPQWTISKFNVAPDGGLESIEQIAPPARTRGSLYVANIAPPEIPVNRLVVYTRNKRPGQWQGKSILRSAYKHW 228 (469) T ss_pred eeeeeeecCcccceeeeeccCCceeeeeecCcccccccccccCCCCccccccCcEEEEEecCCCCCcccchhHHHHHHHH Confidence 55677777765532 222221 1111000 00111122334567777777777666677789999999999999 Q ss_pred HHHHHHHHHHHHHHHccCCcceEEEeCCCCCHHHHHHHHHHHHHHhcccccccceeecCCCceeEecCCChhHHHHHHHH Q lcl|Aclame:pro 200 ENSASADKFINNFYKQGLQVKGLVQYVGDLNEDAKKVFRENFESMSSGLQNSHRIALMPVGYQFQPISLNMSDAQFLENT 279 (429) Q Consensus 200 ~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~g~~~~~~~~vl~~g~~~~~~~~~~~d~~~~e~~ 279 (429) -......++...+.+.-|.|--+.+.+...++++.+.+.+.+.+...|. + ..++++.|++++-+..+-+...+.+.. T Consensus 229 ~fK~~~~~~w~~f~EryG~P~~vgky~~~a~~~ek~~l~~a~~~~~~g~-~--a~~iip~~~~ie~~ea~g~~~~~~~li 305 (469) T protein:vir:10 229 LLKDKLLRIEAATAERNGMGIPVGTASSATDEDEVRKMAALARSVRGGI-N--AGVGLAQGQILELLGVSGNLPDIRRAI 305 (469) T ss_pred HHHHHHHHHHHHHHHHcCCcceEEecCCCCCHHHHHHHHHHHHHHhcCC-c--eEEEccCCceEEEeecCCCchHHHHHH Confidence 9999999999999999999988999998899999988888888776553 2 257789999988877666666788999 Q ss_pred HHHHHHHHHHhcCChhhcCCccccccccHHHHHHHHHHHHHhHHHHHHHHHHHHhhccchhhc----ch--hhhhhhhhh Q lcl|Aclame:pro 280 ELTIRQIATAFGIKMHQLNDLSKATLNNIEQQQQQFYTDTLQATLTMYEQEMTYKLFLDSELD----KG--FYSKFNVDA 353 (429) Q Consensus 280 ~~~~~~Ia~~fgvp~~~l~~~~~~~~~n~~~~~~~~~~~~l~P~~~~i~~~l~~~ll~~~~~~----~~--~~~~fd~~~ 353 (429) ++.-++|+.++-= ..+-.....++++ ..+.........+.-.++.|++.||+.|+..-... .. .++.|+ . T Consensus 306 ~~~d~~Isk~iLG-~tlTs~~~gGS~a-~~~vh~ev~~d~~~sDa~~i~~tln~~li~~l~~lN~g~~~~~P~~~~~--~ 381 (469) T protein:vir:10 306 EGHDRSIALSGLA-HFLNLDGKGGSYA-LASVLEDPFTQAVHAYATSICRIANQHIIEDLVDINFGVDTPAPVLTFD--P 381 (469) T ss_pred HHHHHHHHHHHhc-ccccccCccchhh-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEec--C Confidence 9999999988632 2222221223443 34455667777888899999999998765432111 11 134443 3 Q ss_pred HhhhhHHHHHHHHHHHHhCCC-----CCHHHHHHHhCCCCCCCcceeeeccc--cccccc-cccccCCCCCCCCCCCCCC Q lcl|Aclame:pro 354 ILRADIKTRYEAYRTGIQGGF-----LKPNEARSKEDLPPEAGGDRLLVNGN--MLPIDM-AGQAYLKGGDTNGEVSKEG 425 (429) Q Consensus 354 l~~~d~~~~~~~~~~~~~~g~-----~t~NE~R~~~Gl~~~~~gD~~~~~~n--~~~~~~-~~~~~~~~g~~~~~~~~~~ 425 (429) . ..+.+..++..++++..|+ ++.+.+|+.+|+|+-..++....+.. ..|... .+......+......+... T Consensus 382 ~-e~~~~~~a~~i~~l~~~G~~~~~~~~~~~~~e~~gip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 460 (469) T protein:vir:10 382 I-GSRQDLTAAAVKLLYDAGVFDDDPAVKRAIRQRFNLPSELNDTPSAEPEEPAAVPNQSAAPARTRSSGNADARARAPK 460 (469) T ss_pred C-CCcHHHHHHHHHHHHhcCCccCccccHHHHHHHhCCCCCCCCcccccchhcccCCCCCccccccCCCCCcccccccCC Confidence 3 3456777899999999998 45678999999997655554433321 111111 0111111111122222222 Q ss_pred CCCC Q lcl|Aclame:pro 426 NEGN 429 (429) Q Consensus 426 ~~~n 429 (429) .+.. T Consensus 461 ~~~~ 464 (469) T protein:vir:10 461 ADQG 464 (469) T ss_pred ChHH Confidence 2222 No 118 >protein:vir:79233 Length: 526 # NCBI annotation: portal protein # Family: family:all:313 # MgeID: mge:1867 # MgeName: Phage MP22 # Cross-refs: genbank:acc:YP_001469155;genbank:gi:157834998;genbank:GeneID:5648814 Probab=99.80 E-value=2.8e-18 Score=116.82 Aligned_cols=408 Identities=12% Similarity=0.037 Sum_probs=237.8 Q ss_pred Cchhhhhhcc-ccccc-ccccc--cC-------------CchHHHHHhhcCCCCccee----chhhhh-ccHHHHHHHHH Q lcl|Aclame:pro 1 MDSVKKFFNF-EKRQT-SQVIE--LN-------------KDDEKLLEWLGISPSTISV----KGKNAL-KVATVFACIKI 58 (429) Q Consensus 1 Mg~~~~~~~~-~~~~~-~~~~~--~~-------------~~~~~~~~~~~~~~~~~~~----~~~~a~-~~~~v~~~i~~ 58 (429) |+-+=...+. .+... .++.. .. .....+...+-....+... -.+... +-+.|.+|++. T Consensus 1 ~~~~~d~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~gltp~~l~~il~~a~~gd~~~~~~L~edm~e~D~~i~s~l~~ 80 (526) T protein:vir:79 1 MAQIVDVYGNPIRPQQLREPQTSRLAGLAKEFAQHPAKGLTPAKLARILVEAEQGNLQAQAELFMDMEERDAHLFAEMSK 80 (526) T ss_pred CCeeeCCCCCccCccccchhhhhhhhhhhhhcccCCCCCcCHHHHHHHHHHhhCCCHHHHHHHHHHHHhhChHHHHHHHH Confidence 6654222222 22111 00000 00 0001111111000000000 011222 36789999999 Q ss_pred HHHhhccCceEEEecCCceee-eeecchhhhhhcccCcCCCCHHHHHHHHHHHHHhhCCeEEEEeeCCC-C--ceEEEEe Q lcl|Aclame:pro 59 LSESVSKLPLKIYQEDEYGIQ-RGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRK-G--KVQALWP 134 (429) Q Consensus 59 ia~~ia~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~PN~~~s~~~~~~~~~~~~l~~G~~~~~~~~~~~-g--~~~~l~~ 134 (429) +...|.+++|.|...+++... .....-+..+|...| .+.+++..++ +.+.+|-++.++++... | .+..+.+ T Consensus 81 Rk~av~~~~w~I~p~~~~~~~~~~~a~~v~~~l~~~~----~~~~~i~~~l-dA~~~G~s~~Ei~w~~~~g~~~~~~l~~ 155 (526) T protein:vir:79 81 RKRAILGLDWAVEPPRNASAAEKADADYLHELLLDLE----GLEDLLLDAL-DGIGHGYSCIELEWALQGREWMPLAFHH 155 (526) T ss_pred HHHHHhCCCceEecCCCCChHHHHHHHHHHHHHhccc----CHHHHHHHHH-hhhhhcceeEEEEEeecCCceeEEEeee Confidence 999999999999876544321 111122334443333 3455555543 35789999999977554 3 3678999 Q ss_pred eCCcceEEEEcCCcceeeeeeEEEeecccCceEEEccceEEEeecCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 135 IDASKVTVYIDDVGLLNSKTKMWYVVNTGGQQRVLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYK 214 (429) Q Consensus 135 l~p~~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~evih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ 214 (429) .++.++.+..++... ............+++...++.++.......+|.|.+..+.-..-......++...+.+ T Consensus 156 r~~~~F~~~~~~~~~-------l~~~~~~~~g~~l~~~k~iv~~~~~~~g~p~g~gLlr~~~w~~~fK~~~~~~w~~F~E 228 (526) T protein:vir:79 156 RPQSWFQLNPEDQNE-------LRLRDNSPAGEALQPFGWIIHRPRARSGYVARSGLFRVLAWPYLFRHYATSDLAEMLE 228 (526) T ss_pred ecccceEeccCCCcE-------EEecCCCCCceeecCCceEEEeecCCcCCccccchHHHHHHHHHHHHhhHHHHHHHHH Confidence 999888765443211 1111222334567777555555566667789999999999999999999999999999 Q ss_pred ccCCcceEEEeCCCCCHHHHHHHHHHHHHHhcccccccceeecCCCceeEecCCC-hhHHHHHHHHHHHHHHHHHHhcCC Q lcl|Aclame:pro 215 QGLQVKGLVQYVGDLNEDAKKVFRENFESMSSGLQNSHRIALMPVGYQFQPISLN-MSDAQFLENTELTIRQIATAFGIK 293 (429) Q Consensus 215 ng~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~g~~~~~~~~vl~~g~~~~~~~~~-~~d~~~~e~~~~~~~~Ia~~fgvp 293 (429) .-|.|--+.+.+...++++.+.+.+.+.+..+ ...++++.|++++-+..+ .....|.+..++.-++|+.+. +- T Consensus 229 ~yG~P~~igky~~~a~~~ek~~L~~av~~i~~-----da~~iiP~~~~ie~~ea~~~~~~~f~~li~~~d~~Isk~i-LG 302 (526) T protein:vir:79 229 IYGLPIRLGKYPPGTADEEKATLLRAVTGLGH-----AAAGIIPETMAIDFQQAAQGSSEPFLAMMRQSEDAISKAV-LG 302 (526) T ss_pred HcCCceEEEecCCCCCHHHHHHHHHHHHHHhc-----CcEEEecCCceeEEeecCCCCHHHHHHHHHHHHHHHHHHH-hh Confidence 99999999999988899999888888887643 236788888877766532 233447888999999999885 22 Q ss_pred hhhcCC---ccccccccHHHHHHHHHHHHHhHHHHHHHHHHHHhhccchhhcc---------hhhhhhhhhhHhhhhHHH Q lcl|Aclame:pro 294 MHQLND---LSKATLNNIEQQQQQFYTDTLQATLTMYEQEMTYKLFLDSELDK---------GFYSKFNVDAILRADIKT 361 (429) Q Consensus 294 ~~~l~~---~~~~~~~n~~~~~~~~~~~~l~P~~~~i~~~l~~~ll~~~~~~~---------~~~~~fd~~~l~~~d~~~ 361 (429) ..+-.. ...++++. .+.........+.-.++.|++.||+.++.+..... .-+++|++. ...|.++ T Consensus 303 qtlTs~~~~g~~gS~a~-g~vh~~v~~di~~aDa~~i~~tln~~Li~~l~~~N~~~~~~~~~~p~~~~~~~--e~eDl~~ 379 (526) T protein:vir:79 303 GTLTSTTSQSGGGAFAL-GQVHNEVRHDILASDARQLAATLSRDLLWPLLVLNRPGSPDVRRAPRLVFDLR--EQADITS 379 (526) T ss_pred hhhccccccCcchhhhh-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcCCccccceEEeCCC--CcccHHH Confidence 332211 11223332 33345566777778899999999987643322111 113555543 5778899 Q ss_pred HHHHHHHHHhCCC-CCHHHHHHHhCCCCCCCcceeeeccccccccccccccCCCCCCCCCCCCCCCCCC Q lcl|Aclame:pro 362 RYEAYRTGIQGGF-LKPNEARSKEDLPPEAGGDRLLVNGNMLPIDMAGQAYLKGGDTNGEVSKEGNEGN 429 (429) Q Consensus 362 ~~~~~~~~~~~g~-~t~NE~R~~~Gl~~~~~gD~~~~~~n~~~~~~~~~~~~~~g~~~~~~~~~~~~~n 429 (429) +++...+++..|+ ++..++|+++|+|.-..++.++.|.......................+.....+. T Consensus 380 ~a~~~~~L~~~G~~i~~~~i~e~~gip~~~~~e~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 448 (526) T protein:vir:79 380 MAQSIPALVNVGLEIPSAWVYDKLGIPQPAKNEPVLRPAAQPAILSRQHGQRVAALATIVGPRYGDQQA 448 (526) T ss_pred HHHHHHHHHhCCCcCCHHHHHHHhCCCCCCCchhhccccCCccccccccccccccccccccccCchhhH Confidence 9999999999998 8899999999997655555444332210000000000000000000111111110 No 119 >protein:vir:80040 Length: 461 # NCBI annotation: gp3 # Family: family:all:297 # MgeID: mge:1876 # MgeName: B054 # Cross-refs: genbank:acc:YP_001468707;genbank:gi:157325287;genbank:GeneID:5601731 Probab=99.78 E-value=1.7e-19 Score=123.45 Aligned_cols=393 Identities=16% Similarity=0.139 Sum_probs=215.1 Q ss_pred CchhhhhhcccccccccccccCCchHHHHHhhc--C---------CCCcceechh---hh-hccHHHHHHHHHHHHhhcc Q lcl|Aclame:pro 1 MDSVKKFFNFEKRQTSQVIELNKDDEKLLEWLG--I---------SPSTISVKGK---NA-LKVATVFACIKILSESVSK 65 (429) Q Consensus 1 Mg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~---------~~~~~~~~~~---~a-~~~~~v~~~i~~ia~~ia~ 65 (429) |+-.+......-..++ .....+..-+| . ..+...++.. .+ .+++.+..+|+.+|..+-+ T Consensus 1 ~~~~~~a~~~~~~~~a------~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~~l~~lY~~~~l~r~iVd~~a~d~~r 74 (461) T protein:vir:80 1 MYSIDKAKQAKIDSKI------VNRNDFMVGHGKANSRDKLTRQTPGNGQKLDLKACENLYASNSIAMNIVDIISEDMVR 74 (461) T ss_pred Cccchhhhhhhhhhhh------hhhhHHHhhcCCcchhhhhhccccCcccccCHHHHHHHHHhCCccchhhccchHHhhc Confidence 7766543211100110 00111111111 0 0011112222 23 3578889999999999988 Q ss_pred CceEEEecCCceeeeeecchhhhhhcccCcCCCCHHHHHHHHHHHHHhhCCeEEEEeeCCC-------------CceEEE Q lcl|Aclame:pro 66 LPLKIYQEDEYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRK-------------GKVQAL 132 (429) Q Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~PN~~~s~~~~~~~~~~~~l~~G~~~~~~~~~~~-------------g~~~~l 132 (429) -.+.+...+.+.. ..+...+. .. ...+-+...+.+..++|.+++++..... +.+.+| T Consensus 75 ~g~~i~~~~~~~~-----~~~~~~~~----~l-~~~~~l~~~~~~~rl~G~a~i~i~v~d~~~~~~~~~~pl~~~~~~~~ 144 (461) T protein:vir:80 75 AGWSLKTDNKEMK-----KNIESKWR----KL-KTKDRFQKLYADKRLYGDGFLSIGVVSSNREQADLSTAIDPKTIKSI 144 (461) T ss_pred CCeeeecCCHHHH-----HHHHHHHH----Hh-hHHHHHHHHHHhhcccccEEEEEEeecCCccccCccCCcccccccce Confidence 8887754322110 11112221 11 2334455666677899999988753211 122233 Q ss_pred EeeCC---cceEE---EEcCCcceeeeeeEEEeec------------ccCceEEEccceEEEeecCCCCCcccccCHHHH Q lcl|Aclame:pro 133 WPIDA---SKVTV---YIDDVGLLNSKTKMWYVVN------------TGGQQRVLKPEEILHFKNGITLDGLVGVPTMEY 194 (429) Q Consensus 133 ~~l~p---~~v~~---~~~~~~~~~~~~~~~~~~~------------~~g~~~~~~~~evih~~~~~~~~~~~G~s~~~~ 194 (429) .+|.| ..+.. ..+.....++....|.... .++..+.+-++.|+||......+..+|.|.++. T Consensus 145 ~~l~~~~~~~i~~~~~~~dp~sp~fg~P~~y~i~~~~~~~~~~~~~~~~~~~~~iH~SRii~~~~~~~~~~~~G~S~le~ 224 (461) T protein:vir:80 145 PYINTFNTQKVTQLYLNQDMFSEHFGEVEFFEVNRVSQLGEEILSGTTASTSEQIHRSRIIHEQGLRFEGETKGRSIFES 224 (461) T ss_pred eEEEeccccccchhhhcccCcCcccccceEEEEeccccccccccccccCccceEEccccEEEecCCCCCccccCcchHHH Confidence 33332 22211 1111112222333222211 123346789999999987777777889999999 Q ss_pred HHHHHHHHHHHHHHHHHHHHccCCcceEEEeCC--CCCHHHHHHHHHHHHHHhcccccccceeecCCCceeEecCCChhH Q lcl|Aclame:pro 195 LKSTLENSASADKFINNFYKQGLQVKGLVQYVG--DLNEDAKKVFRENFESMSSGLQNSHRIALMPVGYQFQPISLNMSD 272 (429) Q Consensus 195 ~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~--~~~~e~~~~~~~~~~~~~~g~~~~~~~~vl~~g~~~~~~~~~~~d 272 (429) +...+............+..+.... +++++. .+..+...++.+.+.... +..++++++.+-+++.++.+..+ T Consensus 225 ~~~~l~~~~~~~~~~~~l~~~~~~~--v~k~~~l~~~~~~~~~~~~~~~~~~~----~~~g~~~~d~~e~~e~~~~~lsg 298 (461) T protein:vir:80 225 LYDIITVMDTSLWSVGQILYDFAFK--VYKTDDIDALNKDDKANLTAMLDFMF----RTEALAIIKGDEQLTKESTNVSG 298 (461) T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCC--ceecchHHhhhchHHHHHHHHHHHhc----CCceEEEEcCCcceEEEecCcCC Confidence 9999999999999999888776544 445442 233344445555555432 23457888888899998887776 Q ss_pred HHHHHHHHHHHHHHHHHhcCChhhcCCccccccccHHHHHHHHHH-------HHHhHHHHHHHHHHHHhhccchhh--cc Q lcl|Aclame:pro 273 AQFLENTELTIRQIATAFGIKMHQLNDLSKATLNNIEQQQQQFYT-------DTLQATLTMYEQEMTYKLFLDSEL--DK 343 (429) Q Consensus 273 ~~~~e~~~~~~~~Ia~~fgvp~~~l~~~~~~~~~n~~~~~~~~~~-------~~l~P~~~~i~~~l~~~ll~~~~~--~~ 343 (429) + .+..+.....||.+.+||...|.+...+..++.++..+.|+. .-+.|+++.+...|-+..+..... .. T Consensus 299 l--~~~l~~~~~~iaa~s~iP~t~L~G~s~g~~asge~D~~~yyd~i~~~qe~~l~p~le~l~~~i~~s~~~~~~~~~p~ 376 (461) T protein:vir:80 299 M--KDLLDYGWDYLAGAVRMPKTVLKGQEAGTLTGAQYDVMNYYARVSSIQENRLRPQLEYLTRLLMWASDDCGPSIDPD 376 (461) T ss_pred H--HHHHHHHHHHHhhhhcCCeeeeecccCCccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccCcc Confidence 5 478899999999999999988866555555555555555543 345677666666654433321110 11 Q ss_pred hhhhhhhhhhHhhhhHHHHHH-------HHHHHHhCCCCCHHHHHHHh-C---CCCCCCcceeeeccccccccccccccC Q lcl|Aclame:pro 344 GFYSKFNVDAILRADIKTRYE-------AYRTGIQGGFLKPNEARSKE-D---LPPEAGGDRLLVNGNMLPIDMAGQAYL 412 (429) Q Consensus 344 ~~~~~fd~~~l~~~d~~~~~~-------~~~~~~~~g~~t~NE~R~~~-G---l~~~~~gD~~~~~~n~~~~~~~~~~~~ 412 (429) .+.+.|.+..|...+.+++++ ++.+++.+|+++++|+|+.+ + +++.. ++.-++. +... T Consensus 377 ~~~~~i~f~~L~~~s~kekAe~~~~~a~a~~~~~~~g~is~~e~r~~l~~~~~~~~~~---------~~~~~~~--~~~~ 445 (461) T protein:vir:80 377 SFEWAIEFNPLWNLDSKTDAEVRKLTAEADQIYIVNGVLDPDEVKETRFGRFGLENSS---------KFSGDSA--EIDK 445 (461) T ss_pred ccceEEEeCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHhcCCCCCc---------cCCCCCc--hhhh Confidence 123445556777777666655 57888999999999999865 3 32211 1100000 0000 Q ss_pred CCCCCCCCCCCCCCCC Q lcl|Aclame:pro 413 KGGDTNGEVSKEGNEG 428 (429) Q Consensus 413 ~~g~~~~~~~~~~~~~ 428 (429) -.........++.++| T Consensus 446 ~~~~~~~~~~~e~~~g 461 (461) T protein:vir:80 446 LAKLVYDAYAKKNADG 461 (461) T ss_pred hhhhccccccccCCCC Confidence 0001122223333344 No 120 >protein:vir:96738 Length: 505 # NCBI annotation: putative phage-related protein # Family: family:all:47 # MgeID: mge:1628 # MgeName: VP882 # Cross-refs: genbank:acc:YP_001039817;genbank:gi:126010916;genbank:GeneID:5076248 Probab=99.77 E-value=5.6e-20 Score=126.12 Aligned_cols=419 Identities=11% Similarity=0.069 Sum_probs=242.7 Q ss_pred Cchhhhhhccccccccc-------ccccCCchHHHHHhhcCCCCcce--------------echhhhhccHHHHHHHHHH Q lcl|Aclame:pro 1 MDSVKKFFNFEKRQTSQ-------VIELNKDDEKLLEWLGISPSTIS--------------VKGKNALKVATVFACIKIL 59 (429) Q Consensus 1 Mg~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~a~~~~~v~~~i~~i 59 (429) |++++++..+..+.... .............|... ++..+ -+.+-+..++.+..+|+.+ T Consensus 8 ~~~~dr~i~~~~~~~~~~~~~~~~~y~aa~~~r~~~~w~~~-~~~~s~~~~i~~~~~~lr~RaRdL~rNn~~a~~av~~~ 86 (505) T protein:vir:96 8 PSLAQRMVNWAWYRYVEPQKNAARAFEAARRDRLGKAWLRR-ASRLSADEEIYADLASLVQRAREQSINNPYAKRFYQLL 86 (505) T ss_pred cchhhcccchhhhhhHHHHHHhhhhcccccCCCccccccCC-CCCCChHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHH Confidence 89988887643221100 00000000111111110 00000 0112223578899999988 Q ss_pred HHhhcc-CceEEEecCC--ceeee-ee---cchhhhhhcccCcC----CCCHHHHHHHHHHHHHhhCCeEEEEeeCCCC- Q lcl|Aclame:pro 60 SESVSK-LPLKIYQEDE--YGIQR-GT---KHYLNNLLRLRPNP----YMSSMNFFGSLEAQKNLYGNSYANIEFDRKG- 127 (429) Q Consensus 60 a~~ia~-~~~~~~~~~~--~~~~~-~~---~~~~~~~l~~~PN~----~~s~~~~~~~~~~~~l~~G~~~~~~~~~~~g- 127 (429) .+.+-. .-+.+...-. .+... .. -..++..+...+|+ .++..++...++..++..|++|+...+...+ T Consensus 87 ~~nvVG~~Gi~~~~~~~~~~~~~~~~~~~~ie~~w~~Wa~~~~~D~~g~~~f~~lq~l~~r~~~~dGE~f~~~~~~~~~~ 166 (505) T protein:vir:96 87 KNNVIGPKGMTFQSRVKRRNGKPDDRANTLIEGNWQQWIKKGNCDVTGRYHFVTLLHLWMETLARDGEVLVREHRGYPNK 166 (505) T ss_pred HHHhcCCCcceeeecCCcccccccHHHHHHHHHHHHHhcCCcCcceeccCCHHHHHHHHHHHHhhCCceEEEEeecCCCC Confidence 777754 4454443211 11110 01 11233344444554 4568889999999999999999988664333 Q ss_pred ceEEEEeeCCcceEEEEcC-----C----cce---eeeeeEEEeecc------------cCceEEEccceEEEeecCCCC Q lcl|Aclame:pro 128 KVQALWPIDASKVTVYIDD-----V----GLL---NSKTKMWYVVNT------------GGQQRVLKPEEILHFKNGITL 183 (429) Q Consensus 128 ~~~~l~~l~p~~v~~~~~~-----~----~~~---~~~~~~~~~~~~------------~g~~~~~~~~evih~~~~~~~ 183 (429) .+..|-+|+|+++....+. . ++. ......|+.... ......+++++|+|+..+... T Consensus 167 ~~~~lqliepd~l~~~~n~~~~~~~~i~~GIe~d~~Gr~~aY~i~~~hPgd~~~~~~~~~~~~~rvpa~~vlH~f~~~r~ 246 (505) T protein:vir:96 167 WGYALQILECDRLDLNYNADLQNGNRIRMSIELDAWERPVAYHLLVNHPGDNSYCYHYAGQTYERVPADEIIHTFVPWRP 246 (505) T ss_pred cceEEEEechhhcCCCCCcccCCcCeEEeceEECCCCceEEEEEeecCCCccccccccccccccccCHhHhhhhhcccCC Confidence 3567899999988533211 0 111 112222333211 012345889999999888888 Q ss_pred CcccccCHHHHHHHHHHHHHHHHHHHHHHHHccCCcceEEEeCCCCCH-HHHHHHHHHHHHHhcccccccceeecCCCce Q lcl|Aclame:pro 184 DGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGDLNE-DAKKVFRENFESMSSGLQNSHRIALMPVGYQ 262 (429) Q Consensus 184 ~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~~-e~~~~~~~~~~~~~~g~~~~~~~~vl~~g~~ 262 (429) +...|+|.+..+...+.......+......+-.+...++++.+.+... ...+.-. .... .-..|.+..|..|.+ T Consensus 247 gQ~RGis~lapvl~~l~~l~~y~dael~~a~i~A~~a~fi~~~~~~~~~~~~~~~~----~~~~-~l~pG~i~~L~pGe~ 321 (505) T protein:vir:96 247 HQNRGIPWTHASMVELHHIGEYRKSEMIAAELGAKKVGFYEQDPEAYDQPPEDDQG----EIVE-EVEAGTYQLLPYGIR 321 (505) T ss_pred ccccCcchHHHHHHHHHHHhHHHHHHHHHHHHhhhheeeeecCCccCCCccccccC----cccc-ccCCceeeecCCCCe Confidence 889999999999999999998888888888888899999987644311 1111000 0011 123577899999999 Q ss_pred eEecCCChhHHHHHHHHHHHHHHHHHHhcCChhhcC-CccccccccHHHHHHHHH-----------HHHHhHHHHH-HHH Q lcl|Aclame:pro 263 FQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLN-DLSKATLNNIEQQQQQFY-----------TDTLQATLTM-YEQ 329 (429) Q Consensus 263 ~~~~~~~~~d~~~~e~~~~~~~~Ia~~fgvp~~~l~-~~~~~~~~n~~~~~~~~~-----------~~~l~P~~~~-i~~ 329 (429) ++.++.+--...|.+..+...+.||..+|||.+.|. ..+..|||+..+....++ ...+.|+.+. ++. T Consensus 322 i~~~~~~~p~~~~~~f~~~~lr~iaaglgi~ye~lt~D~s~~nYSS~R~~~~e~~r~~~~~q~~~~~~~~~pi~~~~l~~ 401 (505) T protein:vir:96 322 FKEHKIDHPHTNFGAFVKSSLRGVAAGMGPAYNRLAHDLEGVNFSSLRSGELDERDLYKLLQFFVVTELLERVAGNLISM 401 (505) T ss_pred eeeeCCCCCCCCHHHHHHHHHHHHHhhcCCCHHHHhcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Confidence 999887755666889999999999999999998885 445678887776554443 3344454433 444 Q ss_pred HHHHhhccchhhcch--hhhhhhhhhHhhhhHHHHHHHHHHHHhCCCCCHHHHHHHhCCCCCCCccee------eecccc Q lcl|Aclame:pro 330 EMTYKLFLDSELDKG--FYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEAGGDRL------LVNGNM 401 (429) Q Consensus 330 ~l~~~ll~~~~~~~~--~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~Gl~~~~~gD~~------~~~~n~ 401 (429) ++....+..+..... ..+.|-.-.....|+.+.+++...++.+|+.|.-|+-.+.|.++.+-.++. +.-.+. T Consensus 402 a~l~G~i~~p~~~~~~~~~~~w~~p~~~~iDP~Ke~~a~~~~i~~G~~t~~~~~a~~G~D~~~v~~q~a~e~~~~~~~Gl 481 (505) T protein:vir:96 402 SLLTQALPLNMVDIDRLSQYAFQPRGWDWVDPAKDSKAHSESIKNRTRSRSSIIRAAGDDPEDVFDEIAWEEQLMRDKGV 481 (505) T ss_pred HHHcCCcCCCCccchhhceeeeccCCccccChHHHHHHHHHHHHcCCCCHHHHHHHcCCCHHHHHHHHHHHHHHHHHcCC Confidence 443333322222111 123443344455789999999999999999999999888999875422111 111222 Q ss_pred ccccccccccCCCCCCCCCCCCCCCCC Q lcl|Aclame:pro 402 LPIDMAGQAYLKGGDTNGEVSKEGNEG 428 (429) Q Consensus 402 ~~~~~~~~~~~~~g~~~~~~~~~~~~~ 428 (429) .+... .....+..+.+++++.+|+ T Consensus 482 ~~~~~---~~~~~~~~~~~~~~~~~d~ 505 (505) T protein:vir:96 482 NPTPP---EQESKDATTDEEDDSASDD 505 (505) T ss_pred CCCCC---CCCCCCCCCCCCCCCCCCC Confidence 11111 1111122223333333333 No 121 >protein:vir:99853 Length: 488 # NCBI annotation: portal protein # Family: family:all:313 # MgeID: mge:1480 # MgeName: B3 # Cross-refs: genbank:acc:YP_164068;genbank:gi:56692600;genbank:GeneID:3192581 Probab=99.76 E-value=1.2e-17 Score=113.39 Aligned_cols=382 Identities=12% Similarity=0.020 Sum_probs=226.3 Q ss_pred CchhhhhhcccccccccccccCCchHHHHHhhcCCCCcceechhhhhccHHHHHHHHHHHHhhccCceEEEecCCceeee Q lcl|Aclame:pro 1 MDSVKKFFNFEKRQTSQVIELNKDDEKLLEWLGISPSTISVKGKNALKVATVFACIKILSESVSKLPLKIYQEDEYGIQR 80 (429) Q Consensus 1 Mg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~~~~ 80 (429) .+..+.+-.+. .....+...++.-.+. ... -.....++.+.|.+|++.+...|.+++|.+...+++.... T Consensus 14 ~~~~d~~~~~~-------~~l~~~~~~il~~a~~--g~~-~~y~~l~~D~~i~s~l~~rk~av~~~~w~i~p~~~~~~~~ 83 (488) T protein:vir:99 14 GDGRDITRPFI-------SGLQVPNDSILQRRGG--NDL-RVYEEILSDAQVKTVWGQRQLAVVSREWKVEAGGDRPIDQ 83 (488) T ss_pred Hhhhhhhcccc-------CCCCCCChHHHHhhcc--CCH-HHHHHHhhChHHHHHHHHHHHHHhcCCceEEcCCCChHHH Confidence 00000000000 0000001111110000 000 1124456778999999999999999999997654432211 Q ss_pred eecchhhhhhcccCcCCCCHHHHHHHHHHHHHhhCCeEEEEeeCCC-C--ceEEEEeeCCcceEEEEcCCcceeeeeeEE Q lcl|Aclame:pro 81 GTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRK-G--KVQALWPIDASKVTVYIDDVGLLNSKTKMW 157 (429) Q Consensus 81 ~~~~~~~~~l~~~PN~~~s~~~~~~~~~~~~l~~G~~~~~~~~~~~-g--~~~~l~~l~p~~v~~~~~~~~~~~~~~~~~ 157 (429) .....+..+|. + ..+.+++..++ +.+++|-++.++++... | .+..+.+.|+.++.+..++. ... T Consensus 84 ~~ae~v~~~l~-~----~~~~~~l~~~l-da~~~G~s~~Ei~w~~~~g~~~~~~l~~r~~~~f~~d~~~~-------l~~ 150 (488) T protein:vir:99 84 AAAEHLEQQLQ-R----VGWDRVTSKML-FGVFYGYAVSELIYGRDDRYITLEAIKVRNRRRFRYDQDGG-------LRL 150 (488) T ss_pred HHHHHHHHHHh-C----CCHHHHHHHHH-hhhhhcceeEEEEEeecCCeeeEeeeeeecccceeecCCCc-------eEE Confidence 11223334443 3 35677777765 56889999999887543 3 36688899998877543321 111 Q ss_pred EeecccCceEEEccc--eEEEeecCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHHccCCcceEEEeCC-CCCHHHH Q lcl|Aclame:pro 158 YVVNTGGQQRVLKPE--EILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVG-DLNEDAK 234 (429) Q Consensus 158 ~~~~~~g~~~~~~~~--evih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~-~~~~e~~ 234 (429) ...........++.. -++|.. ....+..+|.|.+..+.-..-......++...+.+.-|.|--+.+.+. ..++++. T Consensus 151 ~~~~~~~~g~~lp~~~~~i~~~~-~~~~g~p~g~gLl~~~~w~~~fK~~~~~~w~~f~E~yG~P~~igky~~~~a~~~ek 229 (488) T protein:vir:99 151 LTPNNMFEGEPCPAPYFWHFSTG-ADNDDEPYGLGLAHWLYWPVFFKRNGIKFWLIFLDKFGMPTAVGRYDDKTATPEDK 229 (488) T ss_pred eccCCCCCccccccCceEEEEee-cCCCCCcccchHHHHHHHHHHHHHhhHHHHHHHHHHcCCceeeeecCCCCCCHHHH Confidence 111111223445433 344443 334557899999999999999999999999999999999988888874 6788888 Q ss_pred HHHHHHHHHHhcccccccceeecCCCceeEecCCC-hhHHHHHHHHHHHHHHHHHHhcCChhhcCCccccccccHHHHHH Q lcl|Aclame:pro 235 KVFRENFESMSSGLQNSHRIALMPVGYQFQPISLN-MSDAQFLENTELTIRQIATAFGIKMHQLNDLSKATLNNIEQQQQ 313 (429) Q Consensus 235 ~~~~~~~~~~~~g~~~~~~~~vl~~g~~~~~~~~~-~~d~~~~e~~~~~~~~Ia~~fgvp~~~l~~~~~~~~~n~~~~~~ 313 (429) +.+.+.+.+..+ ...+|++.|++++-+..+ .....|.+..++.-++|+.++- -..+-+..+.++++ ..+... T Consensus 230 ~~l~~av~~~~~-----~~~~viP~~~~ie~~ea~~~~~~~~~~li~~~d~~Isk~iL-Gqtlts~~~~Gs~a-~~~vh~ 302 (488) T protein:vir:99 230 AKLLAALHAIQT-----DSAIIMPAGMQAELLEAGRSGTADYKTLHDTMDATIAKVGL-GQVASTQGTPGRLG-NDDLQA 302 (488) T ss_pred HHHHHHHHHHhc-----CcEEEecCCceeEEeecCCCChHHHHHHHHHHHHHHHHHHh-hhhhcccccccchh-hHHHHH Confidence 888887777633 235777888777666532 2223478889999999998851 13332222223443 333445 Q ss_pred HHHHHHHhHHHHHHHHHHHHhhccchhhc-----chhhhhhhhhhHhhhhHHHHHHHHHHHHhC-CC-CCHHHHHHHhCC Q lcl|Aclame:pro 314 QFYTDTLQATLTMYEQEMTYKLFLDSELD-----KGFYSKFNVDAILRADIKTRYEAYRTGIQG-GF-LKPNEARSKEDL 386 (429) Q Consensus 314 ~~~~~~l~P~~~~i~~~l~~~ll~~~~~~-----~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~-g~-~t~NE~R~~~Gl 386 (429) ......+.-.++.|++.||+.++...... ..-++.|++. ...|.+++++...++++. |+ ++..++|+.+|+ T Consensus 303 ~v~~d~~~aDa~~i~~tln~~li~~l~~~N~~~~~~p~~~~~~~--e~edl~~~a~~~~~l~~~~G~~i~~~~i~e~~Gi 380 (488) T protein:vir:99 303 DVRLDLVKADADLICESFNLGPARWLTEWNFPGAQPPRVYRVIE--EPEDITAKAERDEKVFRMSGFRPTRGYVQETYGV 380 (488) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcCCcCCceeEecCC--CcccHHHHHHHHHHHHhhcCCCCCHHHHHHHcCC Confidence 56777788899999999998764332111 1123555543 567889999999999986 65 788889999999 Q ss_pred CCCCCcceeeeccccccccccccccCCCCCCCCCCCCCCCCCC Q lcl|Aclame:pro 387 PPEAGGDRLLVNGNMLPIDMAGQAYLKGGDTNGEVSKEGNEGN 429 (429) Q Consensus 387 ~~~~~gD~~~~~~n~~~~~~~~~~~~~~g~~~~~~~~~~~~~n 429 (429) |+-..++....+.- . .... +...+.+... T Consensus 381 p~~~~~~~~~~~~~---~-------~~~~----~~~~~~~~~~ 409 (488) T protein:vir:99 381 EVESTQAEATAPTP---S-------TEFA----EGDQPSDPAA 409 (488) T ss_pred CCcccccccccCCC---c-------ccCC----CCCCCCCchH Confidence 97654443322110 0 0000 0000111111 No 122 >protein:vir:1986 Length: 512 # NCBI annotation: Hypothetical protein # Family: family:all:313 # MgeID: mge:320 # MgeName: Mu # Cross-refs: genbank:acc:NP_050633;genbank:gi:9633520;genbank:GeneID:2636304 Probab=99.76 E-value=2.1e-17 Score=112.03 Aligned_cols=405 Identities=12% Similarity=0.052 Sum_probs=234.0 Q ss_pred Cchhhhhhc-cccccc---ccccccCC-------------chHHHHHhhcCCCC-cce----echhhhhccHHHHHHHHH Q lcl|Aclame:pro 1 MDSVKKFFN-FEKRQT---SQVIELNK-------------DDEKLLEWLGISPS-TIS----VKGKNALKVATVFACIKI 58 (429) Q Consensus 1 Mg~~~~~~~-~~~~~~---~~~~~~~~-------------~~~~~~~~~~~~~~-~~~----~~~~~a~~~~~v~~~i~~ 58 (429) |+-+=...+ +..... .+...... ....+...+-.... ... +-.+-..+.+.|.+|++. T Consensus 1 m~~~~d~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~gltp~~l~~iL~~a~~gd~~~~~~L~~dm~~~D~hi~s~l~~ 80 (512) T protein:vir:19 1 MGRILDISGQPFDFDDEMQSRSDELAMVMKRTQEHPSSGVTPNRAAQMLRDAERGDLTAQADLAFDMEEKDTHLFSELSK 80 (512) T ss_pred CcceeCCCCCccccccccccccchhcccchhhccccccCCCHHHHHHHHHHhhCCCHHHHHHHHHHHHhhChHHHHHHHH Confidence 665422222 111111 11111000 01111111100000 000 001111246789999999 Q ss_pred HHHhhccCceEEEecCCcee-eeeecchhhhhhcccCcCCCCHHHHHHHHHHHHHhhCCeEEEEeeC---CCCceEEEEe Q lcl|Aclame:pro 59 LSESVSKLPLKIYQEDEYGI-QRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFD---RKGKVQALWP 134 (429) Q Consensus 59 ia~~ia~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~PN~~~s~~~~~~~~~~~~l~~G~~~~~~~~~---~~g~~~~l~~ 134 (429) +...|.+++|.|....++.. .......+...|...| .+.+++..++ +.+.+|-++++++.. +...+..+.+ T Consensus 81 Rk~av~~~~w~I~p~~~~~~~~~~~a~~v~~~l~~~~----~f~~~~~~ll-dA~~~G~s~~Ei~w~~~~g~~~~~~~~~ 155 (512) T protein:vir:19 81 RRLAIQALEWRIAPARDASAQEKKDADMLNEYLHDAA----WFEDALFDAG-DAILKGYSMQEIEWGWLGKMRVPVALHH 155 (512) T ss_pred HHHHHhCCCceEecCCCCCHHHHHHHHHHHHHHhcCC----CHHHHHHHHH-hhhhhcceeeeeEeeeeCCceeeeeeee Confidence 99999999999986544221 1111122334444333 3555555544 467899999988764 3345778999 Q ss_pred eCCcceEEEEcCCcceeeeeeEEEeecccCceEEEccceEEEeecCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 135 IDASKVTVYIDDVGLLNSKTKMWYVVNTGGQQRVLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYK 214 (429) Q Consensus 135 l~p~~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~evih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ 214 (429) .|+.++....++.... ...........+++...++.++....+..+|.|.+..+.-..-......++...+.+ T Consensus 156 r~~~~f~~~~~~~~~l-------r~~~~~~~G~~l~~~k~i~~~~~~~~g~p~g~gLlr~~~w~~~fK~~~~~~w~~f~E 228 (512) T protein:vir:19 156 RDPALFCANPDNLNEL-------RLRDASYHGLELQPFGWFMHRAKSRTGYVGTNGLVRTLIWPFIFKNYSVRDFAEFLE 228 (512) T ss_pred eccccceeccCCCcEE-------EecCCCCCceeecCCceEEEeccCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHHH Confidence 9998887654432111 111222233456777666655555667789999999999999999999999999999 Q ss_pred ccCCcceEEEeCCCCCHHHHHHHHHHHHHHhcccccccceeecCCCceeEecCCC-hhHHHHHHHHHHHHHHHHHHh-cC Q lcl|Aclame:pro 215 QGLQVKGLVQYVGDLNEDAKKVFRENFESMSSGLQNSHRIALMPVGYQFQPISLN-MSDAQFLENTELTIRQIATAF-GI 292 (429) Q Consensus 215 ng~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~g~~~~~~~~vl~~g~~~~~~~~~-~~d~~~~e~~~~~~~~Ia~~f-gv 292 (429) .-|.|--+.+.+.+.++++.+.+.+.+.+..+ ...++++.|++++-+..+ .....|.+..++..++|+.+. | T Consensus 229 ~yG~P~~igky~~~a~~~ek~~L~~al~~~~~-----~a~~iiP~~~~ie~~ea~~~~~~~y~~li~~~d~~Isk~iLG- 302 (512) T protein:vir:19 229 IYGLPMRVGKYPTGSTNREKATLMQAVMDIGR-----RAGGIIPMGMTLDFQSAADGQSDPFMAMIGWAEKAISKAILG- 302 (512) T ss_pred HcCCCeeEEecCCCCCHHHHHHHHHHHHHHhh-----CcEEEecCCceEEEeecCCCCHHHHHHHHHHHHHHHHHHHhh- Confidence 99999999999988999999988888888633 236778888877665532 233447888999999999883 3 Q ss_pred ChhhcCC-ccccccccHHHHHHHHHHHHHhHHHHHHHHHHHHhhccchhhcc---------hhhhhhhhhhHhhhhHHHH Q lcl|Aclame:pro 293 KMHQLND-LSKATLNNIEQQQQQFYTDTLQATLTMYEQEMTYKLFLDSELDK---------GFYSKFNVDAILRADIKTR 362 (429) Q Consensus 293 p~~~l~~-~~~~~~~n~~~~~~~~~~~~l~P~~~~i~~~l~~~ll~~~~~~~---------~~~~~fd~~~l~~~d~~~~ 362 (429) ..+-.. ...++++ ..+.........+.-.++.|++.||+.++.+..... --+++|+.. ...|.+.. T Consensus 303 -qtlTs~~g~~Gs~a-~~~vh~ev~~di~~aDa~~i~~tln~~li~~l~~~N~~~~~~~~~~p~~~f~~~--e~eDl~~~ 378 (512) T protein:vir:19 303 -GTLTTEAGDKGARS-LGEVHDEVRREIRNADVGQLARSINRDLIYPLLALNSDSTIDINRLPGIVFDTS--EAGDITAL 378 (512) T ss_pred -hhhcccccccchhh-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCccccceEEecCC--ChhhHHHH Confidence 221111 1222333 344556667778889999999999987764321111 113556544 56788888 Q ss_pred HHHHHHHHhCCCCCHHHHHHHhCCCCCCCcceeeeccccccccccccccCCCCCCCCCCCCCCCCC------C Q lcl|Aclame:pro 363 YEAYRTGIQGGFLKPNEARSKEDLPPEAGGDRLLVNGNMLPIDMAGQAYLKGGDTNGEVSKEGNEG------N 429 (429) Q Consensus 363 ~~~~~~~~~~g~~t~NE~R~~~Gl~~~~~gD~~~~~~n~~~~~~~~~~~~~~g~~~~~~~~~~~~~------n 429 (429) ++...++...--++..++|+++|+|.-..++....+.-..+.... ........+....+..-|. + T Consensus 379 a~~~~~l~~G~~i~~~~i~e~~Gip~~~~~e~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~d~~~~~~~~ 449 (512) T protein:vir:19 379 SDAIPKLAAGMRIPVSWIQEKLHIPQPVGDEAVFTIQPVVPDNGS--QKEAALSAEDIPQEDDIDRMGVSPED 449 (512) T ss_pred HHHHHHHhcCCCCCHHHHHHHhCCCCCCCccccccCCCccccccc--cccccccccCCCchhhHhHHhhhHHH Confidence 888888764444889999999999765444433322111111000 0000000000000000000 0 No 123 >protein:vir:389 Length: 530 # NCBI annotation: gp4 # Family: family:all:47 # MgeID: mge:325 # MgeName: N15 # Cross-refs: genbank:acc:NP_046899;genbank:gi:9630468;genbank:GeneID:1261643 Probab=99.74 E-value=9.1e-19 Score=119.49 Aligned_cols=427 Identities=9% Similarity=0.003 Sum_probs=234.1 Q ss_pred Cchhhhhhcccccccccccc-----cCCchHHHHHhhcCCCCc-----------ceechhhhhccHHHHHHHHHHHHhhc Q lcl|Aclame:pro 1 MDSVKKFFNFEKRQTSQVIE-----LNKDDEKLLEWLGISPST-----------ISVKGKNALKVATVFACIKILSESVS 64 (429) Q Consensus 1 Mg~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~-----------~~~~~~~a~~~~~v~~~i~~ia~~ia 64 (429) |..-.- .+...+....... .......+..|.....+. ..-+.+-+..++.+.+||+.+.+.+- T Consensus 1 ~~~~~~-~~~~~~~~~~~~~~~~~~a~~~~~~~~~w~~~~~s~~~~i~~~~~~lr~RaRdl~rNn~~a~~av~~~~~nvV 79 (530) T protein:vir:38 1 MKIPSL-VGPDGKTSLREYAGYHGGGGGFGGQLRGWNPPSESADAALLPNYSRGNARADDLVRNNGYAANAVQLHQDHIV 79 (530) T ss_pred Ccccee-ecCccccchHHHhhhhcccCCCCCcccccccCCCCHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHhh Confidence 333221 1111110000000 000000011111100000 00111223357899999999999887 Q ss_pred cCceEEEecCC------ceeee----eecchhhhhhcccCc------CCCCHHHHHHHHHHHHHhhCCeEEEEeeCCC-C Q lcl|Aclame:pro 65 KLPLKIYQEDE------YGIQR----GTKHYLNNLLRLRPN------PYMSSMNFFGSLEAQKNLYGNSYANIEFDRK-G 127 (429) Q Consensus 65 ~~~~~~~~~~~------~~~~~----~~~~~~~~~l~~~PN------~~~s~~~~~~~~~~~~l~~G~~~~~~~~~~~-g 127 (429) ..-+++.-+-+ ++... ..-..++..+...|+ ..++..++...++..++..|++|+.+.+... | T Consensus 80 G~Gi~~~~~p~~~~l~~~~~~~~~~~~~ie~~w~~W~~~~~~~~D~~g~~~f~~~q~l~~r~~~~dGE~~~~~~~~~~~g 159 (530) T protein:vir:38 80 GSFFRLSYRPSWRYLGINEEDSRAFSRDVEAAWNEYAEDDFCGIDAERKRTFTMMIREGVAMHAFNGELCVQATWDSDST 159 (530) T ss_pred CCCceeeeccchhhcCCCHhHHHHHHHHHHHHHHHhhcCCCcEEeeeccCCHHHHHHHHHHHHhhCCceEEEeeeccCCC Confidence 76777654311 11000 111123333444454 3568899999999999999999999876543 3 Q ss_pred --ceEEEEeeCCcceEEEEc---CCcc-------eeeeeeEEEeecc--cCc----------eEEEccceEEEeecCCCC Q lcl|Aclame:pro 128 --KVQALWPIDASKVTVYID---DVGL-------LNSKTKMWYVVNT--GGQ----------QRVLKPEEILHFKNGITL 183 (429) Q Consensus 128 --~~~~l~~l~p~~v~~~~~---~~~~-------~~~~~~~~~~~~~--~g~----------~~~~~~~evih~~~~~~~ 183 (429) .+..|-.|+|+++.-..+ +..+ .......|+.... .+. ...+++.+|+|+..+... T Consensus 160 ~~~~~~lq~ie~d~l~~~~~~~~~~~i~~GIe~d~~Gr~~aY~i~~~~~~~~~~~~~~~~~~~~~v~a~~vlH~f~~~r~ 239 (530) T protein:vir:38 160 RLFRTQFKMVSPKRVSNPNNIGDTRNCRAGVKINDSGAALGYYVSDDGYPGWMAQNWTYIPRELPGGRPSFIHVFEPMED 239 (530) T ss_pred CccceEEEEechhhcCCCCCCCCCCeeEeeeEECCCCceEEEEEeeccCCCccccccceeeeeeccChhHeEeeccccCC Confidence 256789999988753221 1100 0112233333321 111 133566799999988878 Q ss_pred CcccccCHHHHHHHHHHHHHHHHHHHHHHHHccCCcceEEEeCCCCC-----------HHHHHHHHHHHHH---Hhc--- Q lcl|Aclame:pro 184 DGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGDLN-----------EDAKKVFRENFES---MSS--- 246 (429) Q Consensus 184 ~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~-----------~e~~~~~~~~~~~---~~~--- 246 (429) +...|+|.+..+...+.-............+-.+...++++.+.+.. .++...+...... .+. T Consensus 240 gQ~RGis~lapvl~~l~~l~~y~dael~~a~i~A~~a~fi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (530) T protein:vir:38 240 GQTRGANAFYSVMEQMKMLDTLQNTQLQSAIVKAMYAATIESELDTQSAMDFILGADNKEQQSKLTGWLGEMAAYYSAAP 319 (530) T ss_pred CcccCCchHHHHHHHHHHHhHHHHHHHHHHHHhhhheeeeeccCCccccccccccCCcccccccccccchhhhhcccccc Confidence 88999999999999999888888888888888888888988654321 1111111111111 001 Q ss_pred ccccccceeecCCCceeEecCCChhHHHHHHHHHHHHHHHHHHhcCChhhcC-CccccccccHHHHHHHHHHH------- Q lcl|Aclame:pro 247 GLQNSHRIALMPVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLN-DLSKATLNNIEQQQQQFYTD------- 318 (429) Q Consensus 247 g~~~~~~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~fgvp~~~l~-~~~~~~~~n~~~~~~~~~~~------- 318 (429) -.-..|.+..|..|.+++.++.+-...+|.+..+...+.||.++|||.+.|. ..+..|||+..+....+++. T Consensus 320 ~~l~pG~i~~L~pGe~i~~~~p~~p~~~~~~f~~~~lr~iaaglGi~ye~lt~D~s~~nYSS~R~~~~e~~r~~~~~q~~ 399 (530) T protein:vir:38 320 VRLGGARVPHLLPGDSLNLQSAQDTDNGYSTFEQSLLRYIAAGLGVSYEQLSRNYSQMSYSTARASANESWAYFMGRRKF 399 (530) T ss_pred eeccCceeeecCCCCeeeeeCCCCCCCCHHHHHHHHHHHHHhhcCCCHHHHhcccccccHHHHHHHHHHHHHHHHHHHHH Confidence 0123567888999999988877655566888899999999999999999885 45677888776655444433 Q ss_pred ----HHhHHHHH-HHHHHHHhhccchhhcc-h--------hhhhhhhhhHhhhhHHHHHHHHHHHHhCCCCCHHHHHHHh Q lcl|Aclame:pro 319 ----TLQATLTM-YEQEMTYKLFLDSELDK-G--------FYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKE 384 (429) Q Consensus 319 ----~l~P~~~~-i~~~l~~~ll~~~~~~~-~--------~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~ 384 (429) .+.|+.+. ++.++.+..+..+.... . ..+.|-.-.....|+.+.+++...++.+|+.|.-++-.+. T Consensus 400 ~~~~~~~pi~~~wl~~av~~G~i~~p~~~~~~~~~~~~a~~~~~w~~p~~~~iDP~Ke~~a~~~~i~~G~~s~~~~~a~~ 479 (530) T protein:vir:38 400 VASRQACQMFLCWLEEAIVRRVVTLPSKARFSFQEARTAWGNANWIGSGRMAIDGLKEVQEAVMLIEAGLSTYEKECAKR 479 (530) T ss_pred HHHHHhhHHHHHHHHHHHHcCCccCCCCCCCCchhhHHhhhceeeecCCccccChHHHHHHHHHHHHcCCCCHHHHHHHc Confidence 23343332 33334333232111000 0 0122222333446899999999999999999999998889 Q ss_pred CCCCCCCccee------eeccccccccccccccCCCCCCCCCCCCCCCCCC Q lcl|Aclame:pro 385 DLPPEAGGDRL------LVNGNMLPIDMAGQAYLKGGDTNGEVSKEGNEGN 429 (429) Q Consensus 385 Gl~~~~~gD~~------~~~~n~~~~~~~~~~~~~~g~~~~~~~~~~~~~n 429 (429) |.++.+-.++. +.-.++.+..... .....+..+.+.+.+.++++ T Consensus 480 G~D~~~v~~q~a~e~~~~~~~Gl~~~~~~~-~~~~~~~~~~~~~~~d~~~~ 529 (530) T protein:vir:38 480 GDDYQEIFAQQVRESMERRAAGLNPPAWAA-AAFEAGVKKSNEEEQDGARA 529 (530) T ss_pred CCCHHHHHHHHHHHHHHHHHcCCCCCCCcc-cccCCCCCCCCCCCCCCCCC Confidence 99875321111 1111221111111 11112222222222222222 No 124 >protein:vir:3420 Length: 533 # NCBI annotation: capsid component # Family: family:all:47 # MgeID: mge:70 # MgeName: lambda # Cross-refs: genbank:acc:NP_040583;genbank:gi:9626247;genbank:GeneID:2703526 Probab=99.74 E-value=1.1e-18 Score=118.93 Aligned_cols=426 Identities=7% Similarity=0.007 Sum_probs=231.7 Q ss_pred Cchhhhhhccccccccc---cccc--CCchHHHHHhhcCCCCcc-----------eechhhhhccHHHHHHHHHHHHhhc Q lcl|Aclame:pro 1 MDSVKKFFNFEKRQTSQ---VIEL--NKDDEKLLEWLGISPSTI-----------SVKGKNALKVATVFACIKILSESVS 64 (429) Q Consensus 1 Mg~~~~~~~~~~~~~~~---~~~~--~~~~~~~~~~~~~~~~~~-----------~~~~~~a~~~~~v~~~i~~ia~~ia 64 (429) |--+-...+..+..... .... +.....+..|.....+.. .-..+-+..++.+..+|+.+.+.+- T Consensus 3 ~p~~~~~~~~~~~~~~~~~~~y~~~a~~~~~~~~~w~p~~~s~~~~~~~~~~~lr~RaRdl~rNn~~a~~av~~~~~nvV 82 (533) T protein:vir:34 3 TPTIPTLLGPDGMTSLREYAGYHGGGSGFGGQLRSWNPPSESVDAALLPNFTRGNARADDLVRNNGYAANAIQLHQDHIV 82 (533) T ss_pred CchhhhhhcccccchHHHHHhhhhccCCCCCcccccccCCCCHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHhh Confidence 11111111101000000 0000 000001111111100000 0011223357899999999998886 Q ss_pred cCceEEEecCC------ceee----eeecchhhhhhcccCc------CCCCHHHHHHHHHHHHHhhCCeEEEEeeCCC-C Q lcl|Aclame:pro 65 KLPLKIYQEDE------YGIQ----RGTKHYLNNLLRLRPN------PYMSSMNFFGSLEAQKNLYGNSYANIEFDRK-G 127 (429) Q Consensus 65 ~~~~~~~~~~~------~~~~----~~~~~~~~~~l~~~PN------~~~s~~~~~~~~~~~~l~~G~~~~~~~~~~~-g 127 (429) ..-+++...-+ ++.. ...-..++..+...|+ ..++..++...++..++..|++|+.+..... | T Consensus 83 G~Gi~~~~~p~~~~lg~~~~~~~~~~~~ie~~w~~w~~~~~~~~D~~g~~~f~~~q~l~~r~~~~dGE~f~~~~~~~~~g 162 (533) T protein:vir:34 83 GSFFRLSHRPSWRYLGIGEEEARAFSREVEAAWKEFAEDDCCCIDVERKRTFTMMIREGVAMHAFNGELFVQATWDTSSS 162 (533) T ss_pred CCCceeeeccchhhcCCChhHHHHHHHHHHHHHHHhhcCccceeccccccCHHHHHHHHHHHHHhCCceEEEeeeccCCC Confidence 65666654311 0000 0111123334444444 3458899999999999999999998866543 2 Q ss_pred --ceEEEEeeCCcceEEEEc---CCcce-------eeeeeEEEeec--ccC----------ceEEEccceEEEeecCCCC Q lcl|Aclame:pro 128 --KVQALWPIDASKVTVYID---DVGLL-------NSKTKMWYVVN--TGG----------QQRVLKPEEILHFKNGITL 183 (429) Q Consensus 128 --~~~~l~~l~p~~v~~~~~---~~~~~-------~~~~~~~~~~~--~~g----------~~~~~~~~evih~~~~~~~ 183 (429) .+..|-.|+|+++.-..+ +..+. ......|+.+. ..+ ....+++.+|+|+..+... T Consensus 163 ~~~~~~lq~ie~d~l~~~~~~~~~~~i~~GIe~d~~Gr~~aY~i~~~~~~~~~~~~~~~~~~~~~v~a~~VlH~f~~~r~ 242 (533) T protein:vir:34 163 RLFRTQFRMVSPKRISNPNNTGDSRNCRAGVQINDSGAALGYYVSEDGYPGWMPQKWTWIPRELPGGRASFIHVFEPVED 242 (533) T ss_pred CccceEEEEechhhcCCCCCCCCCCceEeeeEECCCCCeEEEEEeecCCCCccccccceeeeeeccChhHeeeeccccCC Confidence 256788999988864222 11110 11223333332 121 1223567899999988888 Q ss_pred CcccccCHHHHHHHHHHHHHHHHHHHHHHHHccCCcceEEEeCCCCC-----------HHHHHHHH---HHHHHHhcc-- Q lcl|Aclame:pro 184 DGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGDLN-----------EDAKKVFR---ENFESMSSG-- 247 (429) Q Consensus 184 ~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~-----------~e~~~~~~---~~~~~~~~g-- 247 (429) +...|+|.+..+...+..............+-.+...++++.+.+.. .++.+.+. ......+.+ T Consensus 243 gQ~RGis~lapvl~~l~~l~~y~dael~~a~i~A~~a~fi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (533) T protein:vir:34 243 GQTRGANVFYSVMEQMKMLDTLQNTQLQSAIVKAMYAATIESELDTQSAMDFILGANSQEQRERLTGWIGEIAAYYAAAP 322 (533) T ss_pred CcccCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhheeeeecCCCcccccccccCCCcccccccccccchhhhhccCcce Confidence 88999999999999999998888888888888889999998654311 11111111 111111111 Q ss_pred -cccccceeecCCCceeEecCCChhHHHHHHHHHHHHHHHHHHhcCChhhcCC-ccccccccHHHHHHHHHH-------- Q lcl|Aclame:pro 248 -LQNSHRIALMPVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLND-LSKATLNNIEQQQQQFYT-------- 317 (429) Q Consensus 248 -~~~~~~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~fgvp~~~l~~-~~~~~~~n~~~~~~~~~~-------- 317 (429) .-..|.+..|..|.+++.++.+-...+|.+..+...+.||.++|||.+.|.+ .+..|||+..+....+++ T Consensus 323 ~~l~pG~i~~L~pGe~i~~~~~~~p~~~~~~f~~~~lr~iAaglGi~ye~lt~D~s~~nYSS~R~~~~e~~r~~~~~q~~ 402 (533) T protein:vir:34 323 VRLGGAKVPHLMPGDSLNLQTAQDTDNGYSVFEQSLLRYIAAGLGVSYEQLSRNYAQMSYSTARASANESWAYFMGRRKF 402 (533) T ss_pred eeccCceeeecCCCCeeeecCCCCCCCCHHHHHHHHHHHHHhhcCCCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHH Confidence 1235778889999999888776556668888999999999999999998854 467788887665444333 Q ss_pred ---HHHhHHHHH-HHHHHHHhhccchhhc-------ch--hhhhhhhhhHhhhhHHHHHHHHHHHHhCCCCCHHHHHHHh Q lcl|Aclame:pro 318 ---DTLQATLTM-YEQEMTYKLFLDSELD-------KG--FYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKE 384 (429) Q Consensus 318 ---~~l~P~~~~-i~~~l~~~ll~~~~~~-------~~--~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~ 384 (429) ..+.|+.+. ++.++....+.-+... .. ..+.|-.-.....|+.+.+++...++.+|+.|.-|+-++. T Consensus 403 ~~~~~~~pi~~~wl~~ail~G~i~~p~~~~~~~~~~~~~~~~~~w~~p~~~~iDP~Ke~~a~~~~i~~G~~s~~~~~a~~ 482 (533) T protein:vir:34 403 VASRQASQMFLCWLEEAIVRRVVTLPSKARFSFQEARSAWGNCDWIGSGRMAIDGLKEVQEAVMLIEAGLSTYEKECAKR 482 (533) T ss_pred HHHHHHHHHHHHHHHHHHHcCcccCCCccCCCchhhHHhhhceeeccCCccccChHHHHHHHHHHHHcCCCCHHHHHHHc Confidence 333444333 3333333222211100 00 1123333344556899999999999999999999998889 Q ss_pred CCCCCCCccee------eeccccccccccccccCCCCCCCCCCCCCCCCCC Q lcl|Aclame:pro 385 DLPPEAGGDRL------LVNGNMLPIDMAGQAYLKGGDTNGEVSKEGNEGN 429 (429) Q Consensus 385 Gl~~~~~gD~~------~~~~n~~~~~~~~~~~~~~g~~~~~~~~~~~~~n 429 (429) |.++.+-.++. +.-.+..+ +..+. ........+.+.+..+++ T Consensus 483 G~D~~ev~~q~a~e~~~~~~~gl~~-~~~~~--~~~~s~~~~~~~~~~~~~ 530 (533) T protein:vir:34 483 GDDYQEIFAQQVRETMERRAAGLKP-PAWAA--AAFESGLRQSTEEEKSDS 530 (533) T ss_pred CCCHHHHHHHHHHHHHHHHhcCCCC-CCCCC--cCccCCCCCCCCCCcccC Confidence 99875422111 11111111 11110 111111111111111122 No 125 >protein:vir:79063 Length: 491 # NCBI annotation: gp3 # Family: family:all:313 # MgeID: mge:1862 # MgeName: phiE255 # Cross-refs: genbank:acc:YP_001111203;genbank:gi:134288841;genbank:GeneID:4960737 Probab=99.73 E-value=8e-17 Score=108.83 Aligned_cols=396 Identities=10% Similarity=-0.000 Sum_probs=231.1 Q ss_pred Cchhhhhhccccccc---ccccccCCchHH--HHHhhcCCCCcce---------echhhhhccHHHHHHHHHHHHhhccC Q lcl|Aclame:pro 1 MDSVKKFFNFEKRQT---SQVIELNKDDEK--LLEWLGISPSTIS---------VKGKNALKVATVFACIKILSESVSKL 66 (429) Q Consensus 1 Mg~~~~~~~~~~~~~---~~~~~~~~~~~~--~~~~~~~~~~~~~---------~~~~~a~~~~~v~~~i~~ia~~ia~~ 66 (429) =+|+..--++.+... ............ +....+.++...+ -..+..++.+.|.+|++.+...|.++ T Consensus 3 ~~i~~~~g~~~~~~~~~~~~~~~ia~~~~~~~~~~~~~~~p~~~~il~~~~~~~~~y~~m~~D~~i~s~l~~Rk~av~~~ 82 (491) T protein:vir:79 3 KGLWVSPTEFVKFGEPDKSLSSQIATRARSIDFFALGMYLPNPDPVLKALGKDIRVYRELRADAHVGGCVRRRKAAVKAL 82 (491) T ss_pred CeeeCCCCCcccccccchhHHHHHhhhccccccccccccCcchhHHHhhccCCHHHHHHHhhChHHHHHHHHHHHHHhCC Confidence 133332212221111 000000000000 0000011111110 11234556889999999999999999 Q ss_pred ceEEEecCCceeeeeecchhhhhhcccCcCCCCHHHHHHHHHHHHHhhCCeEEEEeeCCC-C--ceEEEEeeCCcceEEE Q lcl|Aclame:pro 67 PLKIYQEDEYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRK-G--KVQALWPIDASKVTVY 143 (429) Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~l~~~PN~~~s~~~~~~~~~~~~l~~G~~~~~~~~~~~-g--~~~~l~~l~p~~v~~~ 143 (429) +|.+...+++.+. ...+..+|. ++ .+.+++..+ .+.+.+|-++.++++... | .+..+.+.|+.++.+. T Consensus 83 ~w~i~~~~~~~~~---a~~i~e~l~-~~----~~~~~i~~~-lda~~~G~s~~Ei~w~~~~g~~~~~~l~~r~~~~f~~d 153 (491) T protein:vir:79 83 EWGLDRGKAKSRV---AKSIADVFA-DL----DLSRIATEM-LDAVLYGYQPMEITWGKVGNYIVPIDVVGKPADWFVYD 153 (491) T ss_pred CcEEecCCCCHHH---HHHHHHHHh-cC----CHHHHHHHH-HHhhhhcceeEEEEEeecCCeeeEEeeeeecccceeec Confidence 9999876654321 123444443 33 455666655 456789999999877543 3 3568999999888754 Q ss_pred EcCCcceeeeeeEEEeecccCceEEEccceEEEeecCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHHccCCcceEE Q lcl|Aclame:pro 144 IDDVGLLNSKTKMWYVVNTGGQQRVLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLV 223 (429) Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~evih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~ 223 (429) .++. ..+...........+++.-.|++++.......+|.|.+..+.-.........++...+.+.-|.|--+. T Consensus 154 ~~~~-------l~l~~~~~~~~g~~lp~~k~i~~~~~~~~g~p~g~gLl~~~~w~~~fK~~~~~~w~~f~E~~G~P~~ig 226 (491) T protein:vir:79 154 PENQ-------LRFRSKEHWVQGEELPARKFLVPRQEATYLNPYGFPDLSMCFWPTTFKKGGLKFWVQFTEKYGSPMLVG 226 (491) T ss_pred cCCc-------eEEeecCCCCCceeecCCCeEEEEecCCCCCcccchhHHHHHHHHHHHHhhHHHHHHHHHHcCCCeEEE Confidence 3321 111111222334667888777777666677789999999999999999999999999999999999999 Q ss_pred EeCCCCCHHHHHHHHHHHHHHhcccccccceeecCCCceeEecCCC---hhHHHHHHHHHHHHHHHHHHhcCChhhcCCc Q lcl|Aclame:pro 224 QYVGDLNEDAKKVFRENFESMSSGLQNSHRIALMPVGYQFQPISLN---MSDAQFLENTELTIRQIATAFGIKMHQLNDL 300 (429) Q Consensus 224 ~~~~~~~~e~~~~~~~~~~~~~~g~~~~~~~~vl~~g~~~~~~~~~---~~d~~~~e~~~~~~~~Ia~~fgvp~~~l~~~ 300 (429) +.+...++++.+.+.+.+.+..+ ...+|++.|++++-+..+ .....|.+..++.-++|+.++- -.. +... T Consensus 227 ky~~~a~~~ek~~l~~al~~~~~-----~a~~viP~~~~ie~~ea~~~~g~~~~y~~li~~~d~~Isk~iL-Gqt-lTt~ 299 (491) T protein:vir:79 227 KHPRSASDAETNLLLDRLEDMVQ-----DAVAVIPDDSSIEIKEAAGKSGSADVYERLLHFCRGEVSIALL-GQN-QTTE 299 (491) T ss_pred ecCCCCCHHHHHHHHHHHHHHhc-----CeEEEecCCceeEEEeccCCCCChhHHHHHHHHHHHHHHHHHh-hhh-hccC Confidence 99988999999888888887633 235777888777665432 2233377888888899888752 111 2222 Q ss_pred cccccccHHHHHHHHHHHHHhHHHHHHHHHHHHhhccchhh---cchhhhhhhhhhHhhhhHHHHHHHHHHHHhCCC-CC Q lcl|Aclame:pro 301 SKATLNNIEQQQQQFYTDTLQATLTMYEQEMTYKLFLDSEL---DKGFYSKFNVDAILRADIKTRYEAYRTGIQGGF-LK 376 (429) Q Consensus 301 ~~~~~~n~~~~~~~~~~~~l~P~~~~i~~~l~~~ll~~~~~---~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~-~t 376 (429) ..++++..+ .........+.-.++.+++.||+ ++.+... ...-...|.+.... .+.+.+++..+++.+.|+ ++ T Consensus 300 ~~gs~a~~~-vh~~v~~~i~~~D~~~i~~tln~-li~~l~~~N~~~~~~p~f~~~e~e-e~~~~~a~~~~~L~~~G~~i~ 376 (491) T protein:vir:79 300 ATSTRASAQ-AGLEVTDDIRDGDKAIVVEAMNM-LIRWICDLNFDGAARPVFDMWEQE-QVDEIQAGRDEKLTRAGARFT 376 (491) T ss_pred cccchhhHH-HHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHhcCCCCCcceEeecCcC-chhHHHHHHHHHHHhCCCccC Confidence 334444333 34445566677788888888875 3322111 11113345544432 233567889999999988 88 Q ss_pred HHHHHHHhCCCCCCCcceeeeccccccccccccccCCCCCCCCCCCCCCCCCC Q lcl|Aclame:pro 377 PNEARSKEDLPPEAGGDRLLVNGNMLPIDMAGQAYLKGGDTNGEVSKEGNEGN 429 (429) Q Consensus 377 ~NE~R~~~Gl~~~~~gD~~~~~~n~~~~~~~~~~~~~~g~~~~~~~~~~~~~n 429 (429) ..++|+.+|+|+-+.+.....+....+... ........ +.....+. T Consensus 377 ~~~~~e~~Gip~~~~~e~~~~~~~~~~~~~------~~~~~~~~-~~~~~~d~ 422 (491) T protein:vir:79 377 PAYFKRAYNLQDGDLDERPLPVSAVDAVGA------ASFAEFEA-PDQDALDA 422 (491) T ss_pred HHHHHHHhCCCCCCCCccccCcCccccccc------ccccccCC-CCCcchHH Confidence 999999999987655544322211100000 00000000 00001111 No 126 >protein:vir:10321 Length: 495 # NCBI annotation: ORF23 # Family: family:all:47 # MgeID: mge:182 # MgeName: VHML # Cross-refs: genbank:acc:NP_758916;genbank:gi:27311190;genbank:GeneID:956137 Probab=99.73 E-value=2.1e-18 Score=117.55 Aligned_cols=423 Identities=12% Similarity=0.031 Sum_probs=224.4 Q ss_pred Cchhhhhhccccc-cc----ccccccCCchHHHHHhhcCCCCccee----------chhhhhccHHHHHHHHHHHHhhcc Q lcl|Aclame:pro 1 MDSVKKFFNFEKR-QT----SQVIELNKDDEKLLEWLGISPSTISV----------KGKNALKVATVFACIKILSESVSK 65 (429) Q Consensus 1 Mg~~~~~~~~~~~-~~----~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~a~~~~~v~~~i~~ia~~ia~ 65 (429) |+++.+-+..... .. ............+..|-+ +.....+ ..+-+..++.+..+|+.+.+.+-. T Consensus 1 m~~~~~~~~a~~~~~~~~~~~~~y~aa~~~~~~~~~~~-~s~d~~~~~~~~~lr~RaRdl~rNn~~a~~av~~~~~~vVG 79 (495) T protein:vir:10 1 MNMTPSGYQSLASGLLVPVGASAYEGASGGHRWQDIGD-YGPDTAVASGIQTLRARSHHNVRNNPWATNAVATWVAAAVG 79 (495) T ss_pred CCcccccccccchhhhhHHHhhhhhccccCcccCCCCC-CChhHHHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHhhcC Confidence 9998763321111 00 000000000000000100 0000000 112233478899999999988855 Q ss_pred CceEEEecCCceeeeeecchhhhhhccc--CcCCCCHHHHHHHHHHHHHhhCCeEEEEeeCC--CC--ceEEEEeeCCcc Q lcl|Aclame:pro 66 LPLKIYQEDEYGIQRGTKHYLNNLLRLR--PNPYMSSMNFFGSLEAQKNLYGNSYANIEFDR--KG--KVQALWPIDASK 139 (429) Q Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~--PN~~~s~~~~~~~~~~~~l~~G~~~~~~~~~~--~g--~~~~l~~l~p~~ 139 (429) ..++......+......-..++..+..+ ....++..++...++..++..|++|+.+.... .| .+..|-.|+|++ T Consensus 80 ~Gi~p~~~~~~~~~~~~ie~~w~~wa~~~D~~g~~~f~~lq~l~~r~~~~dGE~f~~~~~~~~~~g~~~~~~lqliepd~ 159 (495) T protein:vir:10 80 NGLTPRWRMKEQELRQELQELWGDWVNEADFDEVQSFYGLQALVVRTVINSGEAFVIKKPRPLSEGLSVPLQLQIIEPDM 159 (495) T ss_pred CCcccccCCchHHHHHHHHHHHHHhhcCcccccccCHHHHHHHHHHHHHhCCceEEEEeecccCCCCccceEEEEechhh Confidence 5555543332211111111233333322 34457889999999999999999999876543 33 367899999999 Q ss_pred eEEEEcC------C----cce---eeeeeEEEeec-ccC---------ceEEEccceEEEeecCCCCCcccccCHHHHHH Q lcl|Aclame:pro 140 VTVYIDD------V----GLL---NSKTKMWYVVN-TGG---------QQRVLKPEEILHFKNGITLDGLVGVPTMEYLK 196 (429) Q Consensus 140 v~~~~~~------~----~~~---~~~~~~~~~~~-~~g---------~~~~~~~~evih~~~~~~~~~~~G~s~~~~~~ 196 (429) +....+. . ++. ......|+... ..| ....+++++|+|+.. ...+...|+|.+..+. T Consensus 160 l~~~~~~~~~~~g~~i~~GIe~d~~Gr~vaY~i~~~hpgd~~~~~~~~~~~rvpA~~vlH~f~-~r~gQ~RGis~la~i~ 238 (495) T protein:vir:10 160 LASDIPDETLPSGGYVKGGIRFSNGGKRKAYCFYRNHPAESSLIGDPVDTVWIKAEHVLHVTV-LTVRSDAGAPWFQLLL 238 (495) T ss_pred cCCCCCCCCCCCCCEEEeceEECCCCceEEEEEeecCCCcccccccccceeeechhheEeccc-cCCCcccCcchhHHHH Confidence 8532111 0 111 11222222221 111 245689999999963 4557788999776544 Q ss_pred HHHHHHHHHHHHHHHHHHccCCcceEEEeCCCCCH--HHHHHHH-HHHHHHhcccccccceeecCCCceeEecCCChhHH Q lcl|Aclame:pro 197 STLENSASADKFINNFYKQGLQVKGLVQYVGDLNE--DAKKVFR-ENFESMSSGLQNSHRIALMPVGYQFQPISLNMSDA 273 (429) Q Consensus 197 ~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~~--e~~~~~~-~~~~~~~~g~~~~~~~~vl~~g~~~~~~~~~~~d~ 273 (429) .+.-............+-.+...++++.+..... +...... ..-..... .-..|.+..|..|.+++.++.+-... T Consensus 239 -~l~~l~~y~dael~~a~i~A~~~~fi~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~pG~i~~L~pGe~i~~~~p~~p~~ 316 (495) T protein:vir:10 239 -RLNELDQYEDAELVRKKTAALFAAFIQEATADSTGGPTIGQPKRSKGGKRIT-GLNPGTLQYLQPGQEVKFSNPADVGT 316 (495) T ss_pred -HHHHhhHHHHHHHHHHHHhhhheeeeecCCCccccccccCccccccCcccce-ecCCceeeecCCCCeeeeeCCCCCCC Confidence 4666666666666666777788888876533110 0000000 00000011 12457789999999999888765555 Q ss_pred HHHHHHHHHHHHHHHHhcCChhhcC-CccccccccHHHHHHHHHHHH------------HhHHHHH-HHHHHHHhhccch Q lcl|Aclame:pro 274 QFLENTELTIRQIATAFGIKMHQLN-DLSKATLNNIEQQQQQFYTDT------------LQATLTM-YEQEMTYKLFLDS 339 (429) Q Consensus 274 ~~~e~~~~~~~~Ia~~fgvp~~~l~-~~~~~~~~n~~~~~~~~~~~~------------l~P~~~~-i~~~l~~~ll~~~ 339 (429) .|.+..+...+.||.++|||.+.|. ..+..|||+..+....+++.. +.|+.+. ++.++-...+..+ T Consensus 317 ~~~~f~~~~lr~iaaglGi~Ye~ltgD~s~~nYSS~R~~~~e~~r~~~~~q~~~~~~~~~~pi~~~~l~~a~l~G~i~~p 396 (495) T protein:vir:10 317 TYEPWLRYQLLSIAKGYGITYEMLTGDLRGVNYSSIRAGLLEFRRLCQQVQHHMIIHQFCRPVGRWFMDFAVASGAVVIP 396 (495) T ss_pred CHHHHHHHHHHHHHhhcCCCHHHHhcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCC Confidence 6788899999999999999999884 456678888777665544332 2222222 2222222222111 Q ss_pred hhcch----hhhhhhhhhHhhhhHHHHHHHHHHHHhCCCCCHHHHHHHhCCCCCCCccee------eecccccccccccc Q lcl|Aclame:pro 340 ELDKG----FYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEAGGDRL------LVNGNMLPIDMAGQ 409 (429) Q Consensus 340 ~~~~~----~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~Gl~~~~~gD~~------~~~~n~~~~~~~~~ 409 (429) .+... ..++|-.-.....|+.+.+++...++.+|+.|.-|+-++.|.++.+-.++. +.-.+. +++..+. T Consensus 397 ~~~~~~~~~~~~~w~~p~~~~vDP~Ke~~A~~~~i~~G~~s~~~~~a~~G~D~~~v~~q~a~e~~~~~~~Gl-~~~~~p~ 475 (495) T protein:vir:10 397 DYLQRRRYYNRVSWRTPRWEEVDPLKKHLADLGDVRAGFAPISDKQAERGYDMEELFDMISDANQLIDEYDL-RLDSDPR 475 (495) T ss_pred CchhhhHhhhccccccCCccccChHHHHHHHHHHHHcCCCCHHHHHHHcCCCHHHHHHHHHHHHHHHHHcCC-CCCCCCC Confidence 11110 123343344456789999999999999999999999888999875321111 111111 1111111 Q ss_pred ccCCCCCCCCCCCCCCCCCC Q lcl|Aclame:pro 410 AYLKGGDTNGEVSKEGNEGN 429 (429) Q Consensus 410 ~~~~~g~~~~~~~~~~~~~n 429 (429) .. .+.....+...+.+++| T Consensus 476 ~~-~~~~~~~~~~~~~~~~~ 494 (495) T protein:vir:10 476 YV-NGSGAEQKSVMEAALNN 494 (495) T ss_pred cC-CCccCCCCCCCCCCCCC Confidence 10 11111111222222222 No 127 >protein:vir:95542 Length: 548 # NCBI annotation: Putative portal protein # Family: family:all:47 # MgeID: mge:1574 # MgeName: F10 # Cross-refs: genbank:acc:YP_001293348;genbank:gi:148912769;genbank:GeneID:5228194 Probab=99.72 E-value=6.5e-19 Score=120.29 Aligned_cols=421 Identities=10% Similarity=-0.000 Sum_probs=230.4 Q ss_pred Cchhhhhhcccccccccc----------cccCCchHHHHHhhcCCCCcc-ee----------chhhhhccHHHHHHHHHH Q lcl|Aclame:pro 1 MDSVKKFFNFEKRQTSQV----------IELNKDDEKLLEWLGISPSTI-SV----------KGKNALKVATVFACIKIL 59 (429) Q Consensus 1 Mg~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~-~~----------~~~~a~~~~~v~~~i~~i 59 (429) |+||+++.+++....... ...... .....+.....+.. .+ ..+-+..++.+..+|+.+ T Consensus 1 Mn~iDr~i~~~sP~~a~~R~~ar~~~~~y~aa~~-~r~~~~~~~~~s~~~~i~~~~~~lr~RaRdL~rNn~~a~~av~~~ 79 (548) T protein:vir:95 1 MNLIDRLLEPLAPELVARRLAAREAIQAYEAARP-GRTHKAKRQPLGADTSLQKSAVSMREQCRKLDEDHDLVTGLLDRL 79 (548) T ss_pred CchHHhHhhhcchHHHHHHHHhHHHhccccccCc-cccccccCCCCChHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHH Confidence 999999888664221110 000000 00001100000000 00 011223468899999988 Q ss_pred HHhhcc---CceEEEecCCceeeee-e---cchhhhhhcc--cCcCCCCHHHHHHHHHHHHHhhCCeEEEEeeCCC---- Q lcl|Aclame:pro 60 SESVSK---LPLKIYQEDEYGIQRG-T---KHYLNNLLRL--RPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRK---- 126 (429) Q Consensus 60 a~~ia~---~~~~~~~~~~~~~~~~-~---~~~~~~~l~~--~PN~~~s~~~~~~~~~~~~l~~G~~~~~~~~~~~---- 126 (429) .+.+-. +.+.-.....+..... . -..++..+.. .....++..++...++..++..|++|+.+..... T Consensus 80 ~~nvVG~~G~~i~p~~l~~d~~~a~~l~~~ie~~w~~Wa~~~D~~g~~~f~~lq~l~~R~~~~dGE~f~~~~~~~~~~~~ 159 (548) T protein:vir:95 80 EERVVGGSGIGVEPLPLRLDGSVHAELAMEIRSAWAEWSLSPETSGELTRPQVERLMCRTWLRDGEGLAQKLMGRVPNYT 159 (548) T ss_pred HHhccCccccceeeeecCCCHHHHHHHHHHHHHHHHHhhcCccccccCCHHHHHHHHHHHHHhCCceEEEeeeccccccc Confidence 776653 2333222222211100 0 0112223322 2344578899999999999999999998866432 Q ss_pred ---CceEEEEeeCCcceEEEEcCC--cc----e---eeeeeEEEeecc----------cCceEEEccceEEEeecCCCCC Q lcl|Aclame:pro 127 ---GKVQALWPIDASKVTVYIDDV--GL----L---NSKTKMWYVVNT----------GGQQRVLKPEEILHFKNGITLD 184 (429) Q Consensus 127 ---g~~~~l~~l~p~~v~~~~~~~--~~----~---~~~~~~~~~~~~----------~g~~~~~~~~evih~~~~~~~~ 184 (429) ..+..|..|+|+++..-.... .. . ......|+.... ....+.+++++|+|+..+...+ T Consensus 160 ~g~~~~~~lqliepd~l~~~~~~~~~~i~~GIE~D~~Grp~aY~i~~~hPgd~~~~~~~~~~~rvpA~~VlHif~~~r~g 239 (548) T protein:vir:95 160 FATSVPFALELLEPDYLPFSYNNLSKGIVQGIERDTWRRKRAYHLLKDHPGNLQTLGGSLAVKRVEAERIIHIAYRKRIG 239 (548) T ss_pred CCcccceEEEEechhhcCCCCCCCCCceeeeeEECCCCceEEEEEeecCCCcccccccccceeeechhHheecccccCCc Confidence 235688899998885322211 00 0 012222222221 1234668999999998887788 Q ss_pred cccccCHHHHHHHHHHHHHHHHHHHHHHHHccCCcceEEEeCCCCCHHHHHHHHHHHHHHhcccccccce-eecCCCcee Q lcl|Aclame:pro 185 GLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGDLNEDAKKVFRENFESMSSGLQNSHRI-ALMPVGYQF 263 (429) Q Consensus 185 ~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~g~~~~~~~-~vl~~g~~~ 263 (429) ...|+|.+..+...+..............+-.+...++++.+........ .....-.... .-..|.+ ..|..|.++ T Consensus 240 Q~RGvs~lapvl~~l~~l~~y~dael~~aki~A~~a~fi~~~~~~~~~~~-~~~~~~~~~~--~~~pG~iv~~L~pGe~i 316 (548) T protein:vir:95 240 QNRGVPMLHAVLIRLADLKDYEESERVAARISAALAMYIKKGNPDSYTVE-PGKDRKNRTI--PIAPGMVFDDLEPGEDV 316 (548) T ss_pred cccCcchHHHHHHHHHHHhHHHHHHHHHHHHhhhheeeeecCCCccccCC-CCcccccccc--cccCCccccccCCCcee Confidence 89999999999999999888888888888888889999987543221110 0000000000 0123554 358889998 Q ss_pred EecCCChhHHHHHHHHHHHHHHHHHHhcCChhhcCCccccccccHHHHHHHHHH-----------HHHhHHHHH-HHHHH Q lcl|Aclame:pro 264 QPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKATLNNIEQQQQQFYT-----------DTLQATLTM-YEQEM 331 (429) Q Consensus 264 ~~~~~~~~d~~~~e~~~~~~~~Ia~~fgvp~~~l~~~~~~~~~n~~~~~~~~~~-----------~~l~P~~~~-i~~~l 331 (429) +.++.+-....|.+..+...+.||.++|||.+.|.+.-+.|||+..+....+++ ..+.|+.+. ++.++ T Consensus 317 ~~~~p~~p~~~~~~f~~~~lr~IAaglGipYe~ltgD~s~nYSS~R~~l~e~~r~~~~~q~~~i~~~~~Pi~~~wle~a~ 396 (548) T protein:vir:95 317 GMIESNRPNPFLEGFRNGQLRMIGAGTRSTYSSVSRAYDGTYSAQRQELVEGWLGYDLLQHEFIDYWCRPVYRSWLQMYL 396 (548) T ss_pred eecCCCCCCCCHHHHHHHHHHHHHhhcCCCHHHHhcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Confidence 887766445568889999999999999999998876545688887766554443 333342222 22233 Q ss_pred HHhhccchhh-cc--hhhhhhhhhhHhhhhHHHHHHHHHHHHhCCCCCHHHHHHHhCCCCCCC----------cceeeec Q lcl|Aclame:pro 332 TYKLFLDSEL-DK--GFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEAG----------GDRLLVN 398 (429) Q Consensus 332 ~~~ll~~~~~-~~--~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~Gl~~~~~----------gD~~~~~ 398 (429) -.-.+.-+.. .. .+.+.|-.-.....|+.+.+++...++.+|+.|.-|+-.+.|.++.+- .+++=++ T Consensus 397 l~G~i~lP~~~~~~~~~~~~W~~P~~~~iDP~Kea~A~~~~i~~Gl~T~~~~~a~~G~D~~ev~~q~a~E~~~~~~~GL~ 476 (548) T protein:vir:95 397 LARKERLPADVDHRTLYAAVYQGPVMPWINPMHEANAWELLVKAGFADEAEVARARGRDPRELKKSRETEIKANRAAGLV 476 (548) T ss_pred HcCCcCCCCCCCchhheeeeeecCCccccChHHHHHHHHHHHHcCCCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCC Confidence 2222211110 00 112222223344568999999999999999999999988889887431 1111111 Q ss_pred cccccccccccccCCCCCCCCCCCC----------CCCCCC Q lcl|Aclame:pro 399 GNMLPIDMAGQAYLKGGDTNGEVSK----------EGNEGN 429 (429) Q Consensus 399 ~n~~~~~~~~~~~~~~g~~~~~~~~----------~~~~~n 429 (429) ....|.. ...+++....++++ .++|.. T Consensus 477 ~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 513 (548) T protein:vir:95 477 FSSDAYH----QLVKSGMDPVEAVQKVYLGVGKMLTADEAR 513 (548) T ss_pred CCCcccc----cccccccCCCCchhhhccccccccccchhH Confidence 1111111 00011111111111 111111 No 128 >protein:vir:107880 Length: 491 # NCBI annotation: gp29 # Family: family:all:313 # MgeID: mge:1565 # MgeName: BcepMu # Cross-refs: genbank:acc:YP_024702;genbank:gi:48696939;genbank:GeneID:2845968 Probab=99.72 E-value=4.2e-16 Score=104.87 Aligned_cols=393 Identities=12% Similarity=0.043 Sum_probs=229.8 Q ss_pred Cchhhhhhccccccc---cccccc---------------CCchHHHHHhhcCCCCcceechhhhhccHHHHHHHHHHHHh Q lcl|Aclame:pro 1 MDSVKKFFNFEKRQT---SQVIEL---------------NKDDEKLLEWLGISPSTISVKGKNALKVATVFACIKILSES 62 (429) Q Consensus 1 Mg~~~~~~~~~~~~~---~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~~~i~~ia~~ 62 (429) =+|++.-=++..... ...... ......+++-.+. ... -.+..++.+.|.+|++.+... T Consensus 3 ~~i~~~~g~p~~~~~~~~~~~~~ia~~~~~~~~~~~~~~~~~~~~iLr~~~~---~~~-~y~~m~~D~~i~s~l~~Rk~a 78 (491) T protein:vir:10 3 KGLWVSPTEFVTFGEPDKSLSSQIATRARSIDFFALGMYLPNPDPVLKALGK---DIR-VYRELRADAHVGGCVRRRKAA 78 (491) T ss_pred CceeCCCCCccCcccCChHHHHHHHhhhcccccccccCCccchHHHHHhcCC---CHH-HHHHHhhChHHHHHHHHHHHH Confidence 122221111111000 000000 0000111111111 011 123455678999999999999 Q ss_pred hccCceEEEecCCceeeeeecchhhhhhcccCcCCCCHHHHHHHHHHHHHhhCCeEEEEeeCCCC---ceEEEEeeCCcc Q lcl|Aclame:pro 63 VSKLPLKIYQEDEYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKG---KVQALWPIDASK 139 (429) Q Consensus 63 ia~~~~~~~~~~~~~~~~~~~~~~~~~l~~~PN~~~s~~~~~~~~~~~~l~~G~~~~~~~~~~~g---~~~~l~~l~p~~ 139 (429) |.+++|.|...+++.+. ...+..+|. ++ .+.+++..++ +.+++|.++.++++...| .+..+.+.|+.+ T Consensus 79 v~~~~w~i~~~~~~~~~---~e~v~e~l~-~~----~~~~~l~~~l-da~~~G~s~~Ei~w~~~~g~~~~~~l~~r~~~~ 149 (491) T protein:vir:10 79 VKALEWGLDRGKAKSRV---AKSIADVFA-DL----DLSRIVTEML-DAVLYGYQPMEITWGKVGNYIVPIDVVGKPADW 149 (491) T ss_pred HhCCCcEEecCCCCHHH---HHHHHHHHh-cC----CHHHHHHHHH-HhhhhcceeEEEEEeecCCeeEEEEeeeecccc Confidence 99999999876554321 123444443 33 4667777765 678899999998876543 366899999988 Q ss_pred eEEEEcCCcceeeeeeEEEeecccCceEEEccceEEEeecCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHHccCCc Q lcl|Aclame:pro 140 VTVYIDDVGLLNSKTKMWYVVNTGGQQRVLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQV 219 (429) Q Consensus 140 v~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~evih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~ 219 (429) +.+..++. . .+...........+++...|+.++.......+|.|.+..+.-..-......++...+.+.-|.| T Consensus 150 f~~d~~~~--l-----~~~~~~~~~~g~~l~~~k~i~~~~~~~~~~p~g~gLl~~~~w~~~fK~~~~~~w~~f~E~yG~P 222 (491) T protein:vir:10 150 FVYDPENQ--L-----RFRSKDHWMQGEELPARKFLVPRQEATYLNPYGFPDLSMCFWPTTFKKGGLKFWVQFTEKYGSP 222 (491) T ss_pred eeeccCCc--e-----EEecCCCCCCcceecCCCEEEEEecCCCCCcccchhHHHHHHHHHHHHHHHHHHHHHHHHcCCC Confidence 87643321 1 1111122234456777777777766667778999999999999999999999999999999999 Q ss_pred ceEEEeCCCCCHHHHHHHHHHHHHHhcccccccceeecCCCceeEecCC--Ch-hHHHHHHHHHHHHHHHHHHhcCChhh Q lcl|Aclame:pro 220 KGLVQYVGDLNEDAKKVFRENFESMSSGLQNSHRIALMPVGYQFQPISL--NM-SDAQFLENTELTIRQIATAFGIKMHQ 296 (429) Q Consensus 220 ~~~~~~~~~~~~e~~~~~~~~~~~~~~g~~~~~~~~vl~~g~~~~~~~~--~~-~d~~~~e~~~~~~~~Ia~~fgvp~~~ 296 (429) --+.+.+...++++.+++.+.+.+..+ ...++++.|++++-+.. +. ....|.+..++.-++|+.+.- -.. T Consensus 223 ~~igky~~~a~~~ek~~l~~al~~~~~-----~a~~viP~~~~ie~~ea~~~~g~~~~y~~li~~~d~~Isk~iL-Gqt- 295 (491) T protein:vir:10 223 MLVGKHPRSASDGEKNLLLDCLEDMVQ-----DAVAVVPDDSSIEIKEAAGKTGSADVYERLLHFCRGEVSIALL-GQN- 295 (491) T ss_pred eEEEecCCCCCHHHHHHHHHHHHHHhc-----CcEEEecCCceeEEEecCCCCCChhHHHHHHHHHHHHHHHHHh-hhh- Confidence 999999999999999998888888633 23577888877766543 22 223377888888899988742 112 Q ss_pred cCCccccccccHHHHHHHHHHHHHhHHHHHHHHHHHHhhccchh---hcchhhhhhhhhhHhhhhHHHHHHHHHHHHhCC Q lcl|Aclame:pro 297 LNDLSKATLNNIEQQQQQFYTDTLQATLTMYEQEMTYKLFLDSE---LDKGFYSKFNVDAILRADIKTRYEAYRTGIQGG 373 (429) Q Consensus 297 l~~~~~~~~~n~~~~~~~~~~~~l~P~~~~i~~~l~~~ll~~~~---~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g 373 (429) +.....++++. .+.........+.-.++.++..||+ ++.+.. +...-+.+|.+... ..+.+.+++..+++...| T Consensus 296 lTt~~~gs~a~-~~vh~~v~~di~~~D~~~i~~tln~-li~~l~~~N~~~~~~p~f~~~~~-~e~~~~~a~~~~~L~~~G 372 (491) T protein:vir:10 296 QTTEATSTRAS-AQAGLEVTDDIRDGDKAVVSEAMNM-LIRWICDLNFDGADRPVFDMWEQ-EQVDEIQAGRDQKLTQAG 372 (491) T ss_pred cccCcccchhH-HHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHhcCCCCCcceEEecCc-CchhHHHHHHHHHHHhCC Confidence 22222334433 2334455666677778888888875 432111 11111233443432 234477899999999998 Q ss_pred C-CCHHHHHHHhCCCCCCCcceeeeccccccccccccccCCCCCCCCCCCCCCCCCC Q lcl|Aclame:pro 374 F-LKPNEARSKEDLPPEAGGDRLLVNGNMLPIDMAGQAYLKGGDTNGEVSKEGNEGN 429 (429) Q Consensus 374 ~-~t~NE~R~~~Gl~~~~~gD~~~~~~n~~~~~~~~~~~~~~g~~~~~~~~~~~~~n 429 (429) + ++..++|+++|+|+-+.+..........+.. ..........++..-+.- T Consensus 373 ~~i~~~~i~e~~Gip~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~d~~ 423 (491) T protein:vir:10 373 ARFTPAYFKRAYNLQDGDLDERPLPVSAVDTVG------AASFAEFEAPDQDALDAA 423 (491) T ss_pred CcCCHHHHHHHhCCCCCCcCccccccCCCCCcc------cccccccCCCCCCchHHH Confidence 8 8889999999998754443322111000000 000000000000000000 No 129 >protein:vir:6382 Length: 553 # NCBI annotation: portal protein Lambda B # Family: family:all:47 # MgeID: mge:133 # MgeName: BcepNazgul # Cross-refs: genbank:acc:NP_918995;genbank:gi:34610170;genbank:GeneID:2559575 Probab=99.71 E-value=3.2e-18 Score=116.50 Aligned_cols=428 Identities=9% Similarity=0.025 Sum_probs=229.4 Q ss_pred Cchhhhhhccccccccccccc--------C-CchHHHHHhhcCCCCcc-----------eechhhhhccHHHHHHHHHHH Q lcl|Aclame:pro 1 MDSVKKFFNFEKRQTSQVIEL--------N-KDDEKLLEWLGISPSTI-----------SVKGKNALKVATVFACIKILS 60 (429) Q Consensus 1 Mg~~~~~~~~~~~~~~~~~~~--------~-~~~~~~~~~~~~~~~~~-----------~~~~~~a~~~~~v~~~i~~ia 60 (429) |.-..+............... . .....+..|.....+.. .-..+-+..++.+..+|+.+. T Consensus 2 ~~~~~r~~~~~a~~~~~~~~~~~~~~y~gA~~~~r~~~~w~~~~~s~~~~~~~~~~~lr~RaRdL~rNn~~a~~av~~~~ 81 (553) T protein:vir:63 2 TKVTVRKLSEVTSGRPEQSASLGGGGLEGASRLSRETVSWNPSLRSPDALINPLKRIADARGRDMADNDGFTNGAVGYQR 81 (553) T ss_pred cchhhhhhcccccccchhhhhhhcccccccccCCCcccccccCCCChHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHHH Confidence 111112111111000000000 0 00001111111000000 001122334788999999888 Q ss_pred HhhccCceEEEecCCc-------ee----eeeecchhhhhhcccCc------CCCCHHHHHHHHHHHHHhhCCeEEEEee Q lcl|Aclame:pro 61 ESVSKLPLKIYQEDEY-------GI----QRGTKHYLNNLLRLRPN------PYMSSMNFFGSLEAQKNLYGNSYANIEF 123 (429) Q Consensus 61 ~~ia~~~~~~~~~~~~-------~~----~~~~~~~~~~~l~~~PN------~~~s~~~~~~~~~~~~l~~G~~~~~~~~ 123 (429) ..+-..-+++...-+. +. ....-..++..+...++ ..++..++...++..++..|++|+.+.. T Consensus 82 ~nvVG~Gi~~~~~~~~~~l~g~~~~~~~~~~~~ie~~w~~wa~~~~~~~D~~g~~~f~~~q~l~~r~~~~dGE~~~~~~~ 161 (553) T protein:vir:63 82 DSIVGAQYRLNSMPDINVIPGATEEWAEEYQTIVEAKFELYAESLACYIDNAAISTFTGLIRLGVVGYVKTGEVLATAEW 161 (553) T ss_pred HhhccCCceeeeccchhhhcCCCHHHHHHHHHHHHHHHHHhcCCccceeeccccCCHHHHHHHHHHHHHhCCceEEEeee Confidence 8886666766543110 00 00111123344444443 4457889999999999999999998765 Q ss_pred CCC-C--ceEEEEeeCCcceEEEEcCC-------cce---eeeeeEEEeecc-cC----------------ceEEEccce Q lcl|Aclame:pro 124 DRK-G--KVQALWPIDASKVTVYIDDV-------GLL---NSKTKMWYVVNT-GG----------------QQRVLKPEE 173 (429) Q Consensus 124 ~~~-g--~~~~l~~l~p~~v~~~~~~~-------~~~---~~~~~~~~~~~~-~g----------------~~~~~~~~e 173 (429) ... | .+..|-.|+|+++....+.. ++. ......|+.... -| ....+++.+ T Consensus 162 ~~~~~~~~~~~lq~ie~drl~~~~~~~~~~~i~~GVE~d~~Gr~vaY~i~~~hPgd~~~~~~~~~~~~r~~~~~~v~a~~ 241 (553) T protein:vir:63 162 DRAANRPYATCFQMVSTDRLSNPYQQLDTPTLRRGVQYDKRGRPQGYWIQVAHPGDLYQMAPDMYKWKFVQQSKPWGRRQ 241 (553) T ss_pred ccCCCCcccceEEEechhhcCCCCCCCCCCeeEeeeEECCCCceEEEEeeccCCCccccccccccceeeeccccccChhH Confidence 432 2 24578889998886432221 000 112222322211 01 123478999 Q ss_pred EEEeecCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHHccCCcceEEEeCCCCCHHHHHHH---------------- Q lcl|Aclame:pro 174 ILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGDLNEDAKKVF---------------- 237 (429) Q Consensus 174 vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~~e~~~~~---------------- 237 (429) |||+..+...+...|+|.+..+...+..............+-.+...++++.+.+. ....+.+ T Consensus 242 vlH~f~~~r~gQ~RGis~lapvl~~l~~l~~y~daeL~~a~i~A~~a~fi~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 320 (553) T protein:vir:63 242 VIHILEPREPDQSRGIADIVSGLKDMRMAKRFKEMSLQNAVINASYAAAIESELPP-EFIHSQMSGGSPNADMVGIFGKY 320 (553) T ss_pred heecccccCCCcccCCchHHHHHHHHHHHhHHHHHHHHHHHHhhhheeeeecCCCh-hhhhhhccccccccccccccccc Confidence 99998888888899999999999999999988888888888888898999865422 1111111 Q ss_pred HHHHHHHhcc----cccccceeecCCCceeEecCCChhHHHHHHHHHHHHHHHHHHhcCChhhcCC-ccccccccHHHHH Q lcl|Aclame:pro 238 RENFESMSSG----LQNSHRIALMPVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLND-LSKATLNNIEQQQ 312 (429) Q Consensus 238 ~~~~~~~~~g----~~~~~~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~fgvp~~~l~~-~~~~~~~n~~~~~ 312 (429) .......+.| .-..|.|..|..|.+++.++.+-...+|.+..+...+.||..+|||.+.|.+ .+..|||+..+.. T Consensus 321 ~~~~~~~~~~~~~~~l~pG~i~~L~pGe~i~~~~p~~p~~~~~~F~~~~lr~iaaglGi~Ye~lt~D~s~~nYSS~R~~~ 400 (553) T protein:vir:63 321 MDALKAYVGGANNIQIDGAKIPHLFPGTKLNLKPMGTPGGVGSEFEASLNRHLASAFGMSYEEFTRDFSKANYSSIQAGI 400 (553) T ss_pred ccccccccccccceeecCceeeecCCCCeeeecCCCCCCCCHHHHHHHHHHHHHhhcCCCHHHHhhhcccccHHHHHHHH Confidence 0111111111 1235778889999999888776555668889999999999999999988754 4667888876655 Q ss_pred HHHHHH-----------HHhHHHHH-HHHHHHHhhccchhhcch------------hhhhhhhhhHhhhhHHHHHHHHHH Q lcl|Aclame:pro 313 QQFYTD-----------TLQATLTM-YEQEMTYKLFLDSELDKG------------FYSKFNVDAILRADIKTRYEAYRT 368 (429) Q Consensus 313 ~~~~~~-----------~l~P~~~~-i~~~l~~~ll~~~~~~~~------------~~~~fd~~~l~~~d~~~~~~~~~~ 368 (429) ..+++. .+.|+.+. ++.++-+..+.-+..... ..+++-.-.....|+.+.+++... T Consensus 401 ~e~~r~~~~~q~~~~~~~~~pi~~~wl~~a~l~G~i~~p~~~~~~~~~~p~~~~a~~~~~w~~p~~~~iDP~Ke~~A~~~ 480 (553) T protein:vir:63 401 AMTRRFLEGRKKMCADRLATEFFTLWLEEAIAAGEVPMPPGQTRDLFYQPLMKEALSKCEWIGASQGQIDQLKETQAAVM 480 (553) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccCCCcccchhhcchhhhhhhhceeeecCCccccChHHHHHHHHH Confidence 444433 33343332 222222221211111110 012222223345689999999999 Q ss_pred HHhCCCCCHHHHHHHhCCCCCCC----------cceeeeccccccccccccccCCCCCCCCC--CCCCCCCCC Q lcl|Aclame:pro 369 GIQGGFLKPNEARSKEDLPPEAG----------GDRLLVNGNMLPIDMAGQAYLKGGDTNGE--VSKEGNEGN 429 (429) Q Consensus 369 ~~~~g~~t~NE~R~~~Gl~~~~~----------gD~~~~~~n~~~~~~~~~~~~~~g~~~~~--~~~~~~~~n 429 (429) ++.+|+.|.-|+-++.|.++.+- .+++=++....|....+........+.++ .++++.++- T Consensus 481 ~i~~G~~t~~~~~a~~G~D~~~v~~q~a~e~~~~~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e 553 (553) T protein:vir:63 481 RIDAGLSTYEREIARLGGDFRKSFAQRAREDALLKKYGLTFNLSAKRSLGDGRDAATGIAEDPAAAQTSQQGE 553 (553) T ss_pred HHHcCCCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCCCCCCccccCCCcccCCCCCCCCCCCCcccccC Confidence 99999999999988889987532 11111111111111111111111111111 111111111 No 130 >protein:vir:106491 Length: 646 # NCBI annotation: Pas4 # Family: family:all:2798 # MgeID: mge:1680 # MgeName: phiAsp2 # Cross-refs: genbank:acc:YP_024790;genbank:gi:48697405;genbank:GeneID:2846148 Probab=99.70 E-value=2.4e-18 Score=117.18 Aligned_cols=418 Identities=10% Similarity=0.034 Sum_probs=236.8 Q ss_pred Cchhhhhhcc---cccccccccccCC-------chHHHHHhhcCCCCcceechhhhhc-cHHHHHHHHHHHHhhccCceE Q lcl|Aclame:pro 1 MDSVKKFFNF---EKRQTSQVIELNK-------DDEKLLEWLGISPSTISVKGKNALK-VATVFACIKILSESVSKLPLK 69 (429) Q Consensus 1 Mg~~~~~~~~---~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~a~~-~~~v~~~i~~ia~~ia~~~~~ 69 (429) |.+++---++ ++...+..+.... ....+....+.....+....-.++. .|.+...+.+|++++|++.+. T Consensus 1 ~~~~rPk~~p~~p~~~~~arrr~LtaAsa~l~~~~~~~~kt~~~~~~~WQ~eAW~~~d~vpELry~vgW~~~a~SR~rL~ 80 (646) T protein:vir:10 1 MALLKPKSAPPEPFGAEVARRIALAGATAQVDLGASSSWKTWKFGNKDWQTEGWRLYDIIPEHHFLAGRIGDSVAQARLY 80 (646) T ss_pred CcccCCCCCCCCcccccccchhhhhhccccccCCCcceeecCCCcchhhhHHHHHHHhhhhhHhhHhhhhhhhhceeeee Confidence 8776421000 0000000000000 0000000000011111112223343 488899999999999999999 Q ss_pred EEecCCceeeee--ecchhhhhhcccCcCCCCHHHHHHHHHHHHHhhCCeEEEE---eeCCCCceEEEEeeCCcceEEEE Q lcl|Aclame:pro 70 IYQEDEYGIQRG--TKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANI---EFDRKGKVQALWPIDASKVTVYI 144 (429) Q Consensus 70 ~~~~~~~~~~~~--~~~~~~~~l~~~PN~~~s~~~~~~~~~~~~l~~G~~~~~~---~~~~~g~~~~l~~l~p~~v~~~~ 144 (429) .-+.++.|.... ..+....+....-...-...++++.+..++-+-|++|++. .....+.-..++++-.+.|... T Consensus 81 aseiddtG~~tg~v~~~~v~~iv~~~~Gg~~gQ~qlLkr~~~~ltV~GE~wiv~~~~~~~~~~~~~~W~vvt~~Ev~~t- 159 (646) T protein:vir:10 81 VTEVDDTGEETGEVQDERIKRLAAVPLGTGSQRDDNLRLAGLDLAVGGECWIVGEGAATSPEAAEGSWFVVTGSAISRT- 159 (646) T ss_pred eeeecCCCCCcCccchHHHHHHhhhhccchhhHHHHHHHHHhheecccceEEeeccccCCCCCCccceeeecHHHhccC- Confidence 988887664332 2233333333323333455889999999999999999974 1222222335667666666431 Q ss_pred cCCcceeeeeeEEEeecccCceEEEccceEEEee--cCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHHccCCcceE Q lcl|Aclame:pro 145 DDVGLLNSKTKMWYVVNTGGQQRVLKPEEILHFK--NGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGL 222 (429) Q Consensus 145 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~evih~~--~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~ 222 (429) ++ ... ........++....++..+++ || ++.|.......||+.++...+.-.....+...+..+....-.|+ T Consensus 160 -g~---~~~-i~~p~~~~g~~~v~~~~~d~l-vRiW~P~Prr~~epDSpvra~l~~l~Ei~~lt~~I~aaakSRL~GnGv 233 (646) T protein:vir:10 160 -GD---EIA-VRRPQQRGGSKLVLVDGQDIL-IRCWRPHPNDTDQADSFTRSAIVPLREIELLTKREFAELDSRLTGAGI 233 (646) T ss_pred -CC---eee-eecCccCCCCCcceecCCceE-EEEecCCcccccCCcchhHHHHHHHHHHHHhhhHhHHHHHHHHhcCce Confidence 11 000 001111112233344555653 35 45666677899999999999999999999988888888888899 Q ss_pred EEeCCCCC-------HHHHHHHHHHHH----HHhcc--cccccceeecCC---------CceeEecCCChhHHHHHHHHH Q lcl|Aclame:pro 223 VQYVGDLN-------EDAKKVFRENFE----SMSSG--LQNSHRIALMPV---------GYQFQPISLNMSDAQFLENTE 280 (429) Q Consensus 223 ~~~~~~~~-------~e~~~~~~~~~~----~~~~g--~~~~~~~~vl~~---------g~~~~~~~~~~~d~~~~e~~~ 280 (429) +.++..++ +-..+.+.+.|. ..+.. +..+--++++.. +++...+.....+- -+..++ T Consensus 234 LfvP~e~s~p~~~~~~a~~~~l~~~l~qaa~tAi~De~S~aA~vPiia~~P~E~i~~~~~ik~l~f~~eite~-aiktR~ 312 (646) T protein:vir:10 234 MFLPEGVDFPRGEEDPAGLAGFMAYLQRAAAASMADQSRASAMVPIMATIPNEMMEHLDKIKPLTFWSELSAE-ITPMKD 312 (646) T ss_pred eeeccccccCCCCCCCcchhHHHHHHHHHHHhhhcCCCCccceeeeEEeeChHHHhhhhcceeeccCchhhHH-HhhhHH Confidence 98887653 222334444443 33332 223333444432 33333333333333 568999 Q ss_pred HHHHHHHHHhcCChhhcCCccccccccHHHHHHHHHHHHHhHHHHHHHHHHHHhhccchhhcch------hhhhhhhhhH Q lcl|Aclame:pro 281 LTIRQIATAFGIKMHQLNDLSKATLNNIEQQQQQFYTDTLQATLTMYEQEMTYKLFLDSELDKG------FYSKFNVDAI 354 (429) Q Consensus 281 ~~~~~Ia~~fgvp~~~l~~~~~~~~~n~~~~~~~~~~~~l~P~~~~i~~~l~~~ll~~~~~~~~------~~~~fd~~~l 354 (429) ..++.+|..+-|||+.|-+.+++|.-+.-+....-++ -|.|.+..|+++|++.+|.+..-..| |.++||.+.| T Consensus 313 daI~RlA~glDIppE~LLGlgd~NHWtAWqI~de~vr-HI~P~l~~ic~AlT~~~Lrp~Le~eGi~dp~kyvvW~DaS~L 391 (646) T protein:vir:10 313 KAIARLASSAEIPGEVLTGIGDANHWTAWLISDEGIR-WIRGYLGLIADALTRGFLRRALESMGVTNPERYAFAFDTSTL 391 (646) T ss_pred HHHHHHHhccCCchhheeeccccceeeeeeeccccch-hhhhHHHHHHHHHHhhHHHHHHHHcCCCChhHeEEeecCccc Confidence 9999999999999998877777887777777777778 79999999999999998765544444 6899999987 Q ss_pred hhhhHHHHHHHHHHHHhCCCCCHHHHHHHhCCCCCCCcce--e----------------eecccccccccccc------- Q lcl|Aclame:pro 355 LRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEAGGDR--L----------------LVNGNMLPIDMAGQ------- 409 (429) Q Consensus 355 ~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~Gl~~~~~gD~--~----------------~~~~n~~~~~~~~~------- 409 (429) .. .-.+.+.+..++..|.||-...|+.+|+...++-+. . +.|.-..++..+.. T Consensus 392 t~--~pd~~deA~qa~drGAIt~eAlrk~~Gf~~dd~pt~~E~~~~~~~~~v~~~P~Lil~P~~qa~~~~P~~~~~~lpp 469 (646) T protein:vir:10 392 AS--KPNRLDEAIQLHERNLIKDEEVVKAGAFSVDQMPTVQERAVQILLGLVKTQPDLILDPAIQAALGLPAVQSVGLPP 469 (646) T ss_pred cc--CCCCcHHHHHHHHcCCccHHHHHHHhcccccccCChHHHHHHHHHHHhcCCccccccchhhccccCCCcCccccCC Confidence 43 223445567789999999999999999975432111 0 01111111111110 Q ss_pred ---ccCCCC--------CCCCCCCCCCCCCC Q lcl|Aclame:pro 410 ---AYLKGG--------DTNGEVSKEGNEGN 429 (429) Q Consensus 410 ---~~~~~g--------~~~~~~~~~~~~~n 429 (429) +...|+ ..+++++....+-| T Consensus 470 ~~~~~~dg~~~~~e~~g~~~~~E~~~~pda~ 500 (646) T protein:vir:10 470 TAAQRTDGDLDDDESEGAPNGGEAPDQPDAD 500 (646) T ss_pred cccccccCCCCChhhcCCCCCCccCCCCCCC Confidence 000000 00001111111111 No 131 >protein:vir:79511 Length: 448 # NCBI annotation: portal protein # Family: family:all:2372 # MgeID: mge:1870 # MgeName: P74-26 # Cross-refs: genbank:acc:YP_001468055;genbank:gi:157265497;genbank:GeneID:5600628 Probab=99.68 E-value=2.9e-16 Score=105.81 Aligned_cols=399 Identities=10% Similarity=0.008 Sum_probs=221.9 Q ss_pred Cchhhhhhcccc-cccccccccCCchHH-------HHH--hhcCC----------CCcceechhhhhccHHHHHHHHHHH Q lcl|Aclame:pro 1 MDSVKKFFNFEK-RQTSQVIELNKDDEK-------LLE--WLGIS----------PSTISVKGKNALKVATVFACIKILS 60 (429) Q Consensus 1 Mg~~~~~~~~~~-~~~~~~~~~~~~~~~-------~~~--~~~~~----------~~~~~~~~~~a~~~~~v~~~i~~ia 60 (429) |..-.+ +... .+.......+ .... +.+ +.|.+ +.... ..+..++.+.|.+|++.+. T Consensus 1 m~k~~~--k~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~iLr~~~~~~-ly~~m~~D~hi~s~l~~Rk 76 (448) T protein:vir:79 1 MAKRGR--KPKELVPGPGSIDPS-DVPKLEGASVPVMSTSYDVVVDREFDELLQGKDGLL-VYHKMLSDGTVKNALNYIF 76 (448) T ss_pred CCCCCC--CCccccCcccccccc-cchhhhhhhhhhcccccccccccchhHhhccccchH-HHHHHhhChHHHHHHHHHH Confidence 443221 1100 0000000000 0000 000 01111 11111 1244556788999999999 Q ss_pred HhhccCceEEEecCCceeeeeecchhhhhhcccCcCC---CCHHHHHHHHHHHHHhhCCeEEEEeeC--CCCc--eEEEE Q lcl|Aclame:pro 61 ESVSKLPLKIYQEDEYGIQRGTKHYLNNLLRLRPNPY---MSSMNFFGSLEAQKNLYGNSYANIEFD--RKGK--VQALW 133 (429) Q Consensus 61 ~~ia~~~~~~~~~~~~~~~~~~~~~~~~~l~~~PN~~---~s~~~~~~~~~~~~l~~G~~~~~~~~~--~~g~--~~~l~ 133 (429) ..|.+++|.|...+++.........+...|. .+... .++.+++.. +.+.+++|-++++++.. ..|. +..|. T Consensus 77 ~av~~~~w~v~p~~~~~~~~~~ae~v~~~l~-~~~~~~~~~~f~~~~~~-~lda~~~G~s~~Eivw~~~~~g~~~~~~l~ 154 (448) T protein:vir:79 77 GRIRSAKWYVEPASTDPEDIAIAAFIHAQLG-IDDASVGKYPFGRLFAI-YENAYIYGMAAGEIVLTLGADGKLILDKIV 154 (448) T ss_pred HHHhcCCceEecCCCCHHHHHHHHHHHHHhh-hhhhhhccCCHHHHHHH-HHHhhhhcceeEEEEeeecCCCceeccccc Confidence 9999999999754433222211122333332 33322 244455544 44568899999998864 3454 44566 Q ss_pred eeCCcce---EEEEcCCcceeeeeeEEEeecccCceEEEccceEEEeecCCCCCcccccCHHHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 134 PIDASKV---TVYIDDVGLLNSKTKMWYVVNTGGQQRVLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFIN 210 (429) Q Consensus 134 ~l~p~~v---~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~evih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~ 210 (429) +.++.++ .+..++.-..............+.....+|..-++|..+. .....+|.|.+..+.-..-......+... T Consensus 155 ~r~~~~~~~f~~~~d~~l~~~~~~~~~~~~~~~~~~~~lP~~~~i~~~~~-~~g~p~g~gLlr~~~w~~~fK~~~~~~w~ 233 (448) T protein:vir:79 155 PIHPFNIDEVLYDEEGGPKALKLSGEVKGGSQFVSGLEIPIWKTVVFLHN-DDGSFTGQSALRAAVPHWLAKRALILLIN 233 (448) T ss_pred ccCCccccceeeecCCceEEeecCCcccccccCCCccccccceEEEEecC-ccCCcccchhHHHHHHHHHHHHHHHHHHH Confidence 6676643 2322221000000000000001112245677888888754 45578999999999999999999999999 Q ss_pred HHHHccCCcceEEEeCCCCC--HHHHHHHHHHHHHHhcccccccceeecCCCceeEecCCChhHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 211 NFYKQGLQVKGLVQYVGDLN--EDAKKVFRENFESMSSGLQNSHRIALMPVGYQFQPISLNMSDAQFLENTELTIRQIAT 288 (429) Q Consensus 211 ~~~~ng~~~~~~~~~~~~~~--~e~~~~~~~~~~~~~~g~~~~~~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~ 288 (429) .+.+.-|.|--+.+.+...+ +++.+.+.+...+...|. ++ .+|++.|++++-+.......++.+..++.-++|+. T Consensus 234 ~f~E~yG~P~~vgky~~ga~~~~~~~~~l~~av~~i~~g~-~a--~~iiP~~~~ie~~ea~~~~~~~~~~i~~~d~~Isk 310 (448) T protein:vir:79 234 HGLERFMIGVPTLTIPKSVRQGTKQWEAAKEIVKNFVQKP-RH--GIILPDDWKFDTVDLKSAMPDAIPYLTYHDAGIAR 310 (448) T ss_pred HHHHHcCCceEEEecCCCCCcCHHHHHHHHHHHHHHhcCC-ce--EEEecCCceEEEEecCCCcccHHHHHHHHHHHHHH Confidence 99999999988888876654 556666666665554443 33 47789998887776554555577888999999988 Q ss_pred HhcCChhhcCCccccccccHHHHHHHHHHHHHhHHHHHHHHHHHHhhccchhh-----cch-hhhhhhhhhHhhhhHHHH Q lcl|Aclame:pro 289 AFGIKMHQLNDLSKATLNNIEQQQQQFYTDTLQATLTMYEQEMTYKLFLDSEL-----DKG-FYSKFNVDAILRADIKTR 362 (429) Q Consensus 289 ~fgvp~~~l~~~~~~~~~n~~~~~~~~~~~~l~P~~~~i~~~l~~~ll~~~~~-----~~~-~~~~fd~~~l~~~d~~~~ 362 (429) +.-= ..+-...+.++++.............+.-.++.|++.||+.|+..--. ... -++.|+. ....|.++. T Consensus 311 ~iLG-qtlTs~~~~g~~~~~~~~~~~v~~~~~~aDa~~i~~tln~~li~~l~~lNfg~~~~~P~~~f~~--~e~~Dl~~~ 387 (448) T protein:vir:79 311 ALGI-DFNTVQLNMGVQAINIGEFVSLTQQTIISLQREFASAVNLYLIPKLVLPNWPSATRFPRLTFEM--EERNDFSAA 387 (448) T ss_pred HHhh-hhhccccccchhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcCCCcEEEecC--CChHHHHHH Confidence 8631 222112222334444333344556677788999999999877643211 111 1455654 356788889 Q ss_pred HHHHHHHHhCCCCCHHHHHHHhCCCC-CCCcceeeeccccccccccccccCCCCCCCCC-CCCCCCCCC Q lcl|Aclame:pro 363 YEAYRTGIQGGFLKPNEARSKEDLPP-EAGGDRLLVNGNMLPIDMAGQAYLKGGDTNGE-VSKEGNEGN 429 (429) Q Consensus 363 ~~~~~~~~~~g~~t~NE~R~~~Gl~~-~~~gD~~~~~~n~~~~~~~~~~~~~~g~~~~~-~~~~~~~~n 429 (429) ++...+++..+...-+-+|+.+|+|. .|+.+ .. . .+..+.. +..+...+| T Consensus 388 a~~~~~l~~~~~~~~~~~~~~~~~p~~~~~~~-~~---------a-------~~~~~~~~~~~~~~~~~ 439 (448) T protein:vir:79 388 ANLMGMLINAVKDSEDIPTELKALIDALPSKM-RR---------A-------LGVVDEVREAVRQPADS 439 (448) T ss_pred HHHhhhhhccchhhHHHHHHhhcCCCCCCCcc-cc---------c-------cCCCCcccccccCCccc Confidence 99999999887655555788889884 33321 10 0 0011111 111222223 No 132 >protein:vir:95254 Length: 488 # NCBI annotation: Phage conserved protein # Family: family:all:2372 # MgeID: mge:1561 # MgeName: Felix 01 # Cross-refs: genbank:acc:NP_944885;genbank:gi:158267601;genbank:GeneID:2744039 Probab=99.68 E-value=1.1e-15 Score=102.52 Aligned_cols=409 Identities=13% Similarity=0.111 Sum_probs=215.1 Q ss_pred CchhhhhhcccccccccccccCCchHHHHHhhc--C----------------CCCcceechhhhhccHHHHHHHHHHHHh Q lcl|Aclame:pro 1 MDSVKKFFNFEKRQTSQVIELNKDDEKLLEWLG--I----------------SPSTISVKGKNALKVATVFACIKILSES 62 (429) Q Consensus 1 Mg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~----------------~~~~~~~~~~~a~~~~~v~~~i~~ia~~ 62 (429) |.= ...+........+.+.+. . ...... ..+.+++-+.|.+|++.+... T Consensus 1 ~~~------------~~~~~~gl~p~rl~~i~~~~~~~~~~~~~~~~~~~Lr~~~~~~-ly~~m~~D~hi~s~l~~Rk~a 67 (488) T protein:vir:95 1 MAD------------ITETQESLPPFRMGEVGSLGLKVKNGRIYEEPRQALRFPESIK-TFQLMMRDPAVAASVNIIKMF 67 (488) T ss_pred CCC------------ccccCCCCCHHHHHHHHHHhhccccchhhccchhhhcccchHH-HHHHHhhChHHHHHHHHHHHH Confidence 211 111112222222222220 0 000111 234455678999999999999 Q ss_pred hccCceEEEecCCceeee---eecchhhhhhcccCcCCCCHHHHHHHHHHHHHhhCCeEEEEeeCC-------------C Q lcl|Aclame:pro 63 VSKLPLKIYQEDEYGIQR---GTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDR-------------K 126 (429) Q Consensus 63 ia~~~~~~~~~~~~~~~~---~~~~~~~~~l~~~PN~~~s~~~~~~~~~~~~l~~G~~~~~~~~~~-------------~ 126 (429) |.+++|.|...++..... .....+..++. +-..++.+++..++ +.+.+|-++.+++... + T Consensus 68 v~~~~w~v~p~~~~~~d~~~~~~a~~v~~~l~---~~~~~~~~~i~~~l-da~~~G~s~~Eivw~~~~~~~~~~~~~~~d 143 (488) T protein:vir:95 68 VRKVNWRFVPPKGKEQDPKMLERADFFNSLMD---DMEHDWADFINSVM-SFCTYGFCVNEKVYKKRQGKKGKYQSKFDD 143 (488) T ss_pred HhcCCceEecCCCCchhHHHHHHHHHHHHHHh---ccCccHHHHHHHHH-HhhcccceeeeeeeeccccccccccccccC Confidence 999999997644321111 01112223332 22234666766664 5688999999887753 2 Q ss_pred Cc--eEEEEeeCCcc---eEEEEcCCcceeeeeeE--------EEeecccCceEEEccceEEEeecCCCCCcccccCHHH Q lcl|Aclame:pro 127 GK--VQALWPIDASK---VTVYIDDVGLLNSKTKM--------WYVVNTGGQQRVLKPEEILHFKNGITLDGLVGVPTME 193 (429) Q Consensus 127 g~--~~~l~~l~p~~---v~~~~~~~~~~~~~~~~--------~~~~~~~g~~~~~~~~evih~~~~~~~~~~~G~s~~~ 193 (429) |. +..|.+.|+.+ +.+..++.-........ ...+........+++...++.++.......+|.|.+. T Consensus 144 g~~~~~~i~~Rpq~~~~~f~~d~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~lP~~kfi~~~~~~~~g~p~g~gLlr 223 (488) T protein:vir:95 144 GLIGWAKLPIRNQSTLDKWYFDEDFRRVTGVRQNLRNVSHIAGAINLGERPLTRKLPRAKFMLFKYDDEYGNPEGRSPLL 223 (488) T ss_pred CeeeeeeeeecCcccccceeeccCCCceeecccccccccccccccccccccccccccccceEEEeecCCCCccchhhHHH Confidence 22 44555555532 22222211110000000 0000111223457777766666666677789999999 Q ss_pred HHHHHHHHHHHHHHHHHHHHHccCCcceEEEeC----CCCCHHHHHHHHHHHHHHhccc-ccccceeecCCCceeEe--- Q lcl|Aclame:pro 194 YLKSTLENSASADKFINNFYKQGLQVKGLVQYV----GDLNEDAKKVFRENFESMSSGL-QNSHRIALMPVGYQFQP--- 265 (429) Q Consensus 194 ~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~----~~~~~e~~~~~~~~~~~~~~g~-~~~~~~~vl~~g~~~~~--- 265 (429) .+.-..-......++...+.+..+.+--+...+ ...++++.+.+.+...+..... .+...-++++.|++... T Consensus 224 ~~~w~~~fK~~~~~~w~~f~Er~g~g~p~~~~p~~~~~~~~~~e~~~l~~a~~~i~~~~~~~~~ag~iiP~g~~~~~k~~ 303 (488) T protein:vir:95 224 NAYVPWKYKVQIEEYEAVGVSRDLVGMPKIGLPPDYLDENAEPEKKAFVQYCKTVVNDMIANDRAGLIWPRYIDPDTKED 303 (488) T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcccceeEeeccCCCCCcccHHHHHHHHHHHHHHHHhhccchhheeeccccccccchh Confidence 999999999999999999999754443344332 2234444444544444432110 11122366677765332 Q ss_pred ------cCCC-hhHHHHHHHHHHHHHHHHHHhcCChhhcCCccccccccHHHHHHHHHHHHHhHHHHHHHHHHHHhhccc Q lcl|Aclame:pro 266 ------ISLN-MSDAQFLENTELTIRQIATAFGIKMHQLNDLSKATLNNIEQQQQQFYTDTLQATLTMYEQEMTYKLFLD 338 (429) Q Consensus 266 ------~~~~-~~d~~~~e~~~~~~~~Ia~~fgvp~~~l~~~~~~~~~n~~~~~~~~~~~~l~P~~~~i~~~l~~~ll~~ 338 (429) ++.. ..-..+.++.++.-++|+.+.--.--..+....++++ ..+.........+.-.++.|++.||+.|+.+ T Consensus 304 ~~e~~l~~~~~~~~~~~~~li~~~d~~Isk~iLGqtLT~~~~~~Gs~A-l~~vh~ev~~~i~~aDa~~i~~tln~~li~~ 382 (488) T protein:vir:95 304 IFEFSLVSRQGAKAYDTGSIIDRYSKQIMMAFMSDVLAMGQSKYGSFS-LADSKTSLLAMSVDILLKQIKNVINRDLVAQ 382 (488) T ss_pred hhhhhccccccCCchhHHHHHHHHHHHHHHHHhccccccccCcchhhh-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Confidence 2221 2233467778888889988863211111111223333 3445566777778889999999999877644 Q ss_pred hhh----cch--hhhhhhhhhHhhhhHHHHHHHHHHHHhCCCCCH-----HHHHHHhCCCCCCCcceeeecccccccccc Q lcl|Aclame:pro 339 SEL----DKG--FYSKFNVDAILRADIKTRYEAYRTGIQGGFLKP-----NEARSKEDLPPEAGGDRLLVNGNMLPIDMA 407 (429) Q Consensus 339 ~~~----~~~--~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~-----NE~R~~~Gl~~~~~gD~~~~~~n~~~~~~~ 407 (429) --. ... -++.|+ .....|.++.+++..+++..|+.-+ +.+|+.+|+|+-+.+.....+.-..+.... T Consensus 383 l~~~Nfg~~~~~P~~~~~--~~e~~Dl~~~ae~~~~L~~~G~~i~~~~~~~~i~e~~gip~~~~~e~~~~~~~~~~~~~~ 460 (488) T protein:vir:95 383 TYALNMWDDEEHVQITYD--DIETPDLEAIGSYIQKTVAVGALEVDKELSNKLREHIGLPPADESQPVSEKLSPNSQSRS 460 (488) T ss_pred HHHhcCCCCCCccEEEec--CcChhhHHHHHHHHHHHHhCCCccccHHHHHHHHHHhCCCCCCCCccccccCCCCCCCCC Confidence 211 111 235554 4467788999999999999998765 569999999976554444333211111111 Q ss_pred ccccCCCCC-----CCCCCCCCCCCCC Q lcl|Aclame:pro 408 GQAYLKGGD-----TNGEVSKEGNEGN 429 (429) Q Consensus 408 ~~~~~~~g~-----~~~~~~~~~~~~n 429 (429) +......++ ...+.+..++..| T Consensus 461 ~~~~~~~~~~~~~~~~~~~~~~a~~~~ 487 (488) T protein:vir:95 461 GDGYKTAGEGTAKTPSAKDPSTANKAN 487 (488) T ss_pred CcccCCCcccCCcccccccchhhhhcc Confidence 111000010 0111122222222 No 133 >protein:vir:77981 Length: 448 # NCBI annotation: portal protein # Family: family:all:2372 # MgeID: mge:1843 # MgeName: P23-45 # Cross-refs: genbank:acc:YP_001467939;genbank:gi:157265380;genbank:GeneID:5600471 Probab=99.68 E-value=6.6e-16 Score=103.80 Aligned_cols=397 Identities=11% Similarity=0.059 Sum_probs=223.1 Q ss_pred Cchhhhhhccccccccc-ccccCCchHH----------HHH--hhcCC----------CCcceechhhhhccHHHHHHHH Q lcl|Aclame:pro 1 MDSVKKFFNFEKRQTSQ-VIELNKDDEK----------LLE--WLGIS----------PSTISVKGKNALKVATVFACIK 57 (429) Q Consensus 1 Mg~~~~~~~~~~~~~~~-~~~~~~~~~~----------~~~--~~~~~----------~~~~~~~~~~a~~~~~v~~~i~ 57 (429) |..-++ |++.. +.+....... +.. +.|.+ +....+ .+..++.+.|.+|++ T Consensus 1 m~kk~~------k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~iLr~~~~~~l-y~~m~~D~hi~s~l~ 73 (448) T protein:vir:77 1 MAKRGR------KPKELVPGPGSIDPSDVPKLEGASVPVMSTSYDVVVDREFDELLQGKDGLLV-YHKMLSDGTVKNALN 73 (448) T ss_pred CCCCCC------CCcccCCcccccchhhhhhhccchhhhcccccccccccchhHhhccccchHH-HHHHhhChHHHHHHH Confidence 544321 11100 0000000000 000 00111 111111 244556788999999 Q ss_pred HHHHhhccCceEEEecCCceeeeeecchhhhhhcccCc---CCCCHHHHHHHHHHHHHhhCCeEEEEeeC--CCCc--eE Q lcl|Aclame:pro 58 ILSESVSKLPLKIYQEDEYGIQRGTKHYLNNLLRLRPN---PYMSSMNFFGSLEAQKNLYGNSYANIEFD--RKGK--VQ 130 (429) Q Consensus 58 ~ia~~ia~~~~~~~~~~~~~~~~~~~~~~~~~l~~~PN---~~~s~~~~~~~~~~~~l~~G~~~~~~~~~--~~g~--~~ 130 (429) .+...|.+++|.|...+++.........+...|. .+. ...++.+++..+ .+.+.+|-++.+++.. .+|. +. T Consensus 74 ~Rk~av~~~~w~v~p~~~~~~d~~~ae~v~~~l~-~~~~~~~~~~f~~~i~~~-lda~~~G~s~~Eivw~~~~dg~~~~~ 151 (448) T protein:vir:77 74 YIFGRIRSAKWYVEPASTDPEDIAIAAFIHAQLG-IDDASVGKYPFGRLFAIY-ENAYIYGMAAGEIVLTLGADGKLILD 151 (448) T ss_pred HHHHHHhcCCceEecCCCCHHHHHHHHHHHHHhh-chhhhhccCCHHHHHHHH-HHhhhhcceeEEEEEeecCCCceeec Confidence 9999999999999764443222211122333332 222 223566777776 5779999999998774 3454 44 Q ss_pred EEEeeCCcceEEE-EcCCcceeee--eeEEEeecccCceEEEccceEEEeecCCCCCcccccCHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 131 ALWPIDASKVTVY-IDDVGLLNSK--TKMWYVVNTGGQQRVLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASADK 207 (429) Q Consensus 131 ~l~~l~p~~v~~~-~~~~~~~~~~--~~~~~~~~~~g~~~~~~~~evih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~ 207 (429) .|.+.++..++.. .+.+...... ...+.....+.....+|..-++|..+. ..+..+|.|.+..+.-..-......+ T Consensus 152 ~l~~r~~~~~~~f~~~~~~~l~~~~~~~~~~~~~~~~~~~~lP~~~~i~~~~~-~~g~p~g~gLlr~~~w~~~fK~~~~~ 230 (448) T protein:vir:77 152 KIVPIHPFNIDEVLYDEEGGPKALKLSGEVKGGSQFVNGLEIPIWKTVVFLHN-DDGSFTGQSALRAAVPHWLAKRALIL 230 (448) T ss_pred cccccCCCccceeeeecCCceEEEecCCcccccccCCCccccccceEEEEecC-CcCCcccchHHHHHHHHHHHHHhhHH Confidence 5666676543321 1111111100 000000011112345688888888754 45678999999999999999999999 Q ss_pred HHHHHHHccCCcceEEEeCCCCC--HHHHHHHHHHHHHHhcccccccceeecCCCceeEecCCChhHHHHHHHHHHHHHH Q lcl|Aclame:pro 208 FINNFYKQGLQVKGLVQYVGDLN--EDAKKVFRENFESMSSGLQNSHRIALMPVGYQFQPISLNMSDAQFLENTELTIRQ 285 (429) Q Consensus 208 ~~~~~~~ng~~~~~~~~~~~~~~--~e~~~~~~~~~~~~~~g~~~~~~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~ 285 (429) +...+.+.-|.|--+.+.+...+ +++.+.+.+...+...|. ++ .++++.|++++-++.+....++.+..+++-++ T Consensus 231 ~w~~f~E~yG~P~~vgky~~ga~~~~~~~~~l~~av~~i~~g~-~a--~~iiP~g~~ie~~ea~~~~~~~~~~i~~~d~~ 307 (448) T protein:vir:77 231 LINHGLERFMIGVPTLTIPKSVRQGTKQWEAAKEIVKNFVQKP-RH--GIILPDDWKFDTVDLKSAMPDAIPYLTYHDAG 307 (448) T ss_pred HHHHHHHHcCCceeEEecCCCCCCCHHHHHHHHHHHHHHhcCC-ce--EEEecCCceEEEEecCCCccCHHHHHHHHHHH Confidence 99999999999988888876654 456666766666644442 33 47788998877766554445577888999999 Q ss_pred HHHHhcCChhhcCCccccccccHHHHHHHHHHHHHhHHHHHHHHHHHHhhccchhh-----cch-hhhhhhhhhHhhhhH Q lcl|Aclame:pro 286 IATAFGIKMHQLNDLSKATLNNIEQQQQQFYTDTLQATLTMYEQEMTYKLFLDSEL-----DKG-FYSKFNVDAILRADI 359 (429) Q Consensus 286 Ia~~fgvp~~~l~~~~~~~~~n~~~~~~~~~~~~l~P~~~~i~~~l~~~ll~~~~~-----~~~-~~~~fd~~~l~~~d~ 359 (429) |+.+..- ..+-...+.++++.............+.-.++.|++.||+.|+..--. ... -++.|+.. ...|. T Consensus 308 Isk~iLG-qtlTs~~~~g~~~~~~~~~~~v~~~~~~aDa~~i~~tln~~Li~~l~~lNfg~~~~~P~~~f~~~--e~eDl 384 (448) T protein:vir:77 308 IARALGI-DFNTVQLNMGVQAVNIGEFVSLTQQTIISLQREFASAVNLYLIPKLVLPNWPGATRFPRLTFEME--ERNDF 384 (448) T ss_pred HHHHHhc-cccccccccchhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCEEEecCC--ChhhH Confidence 9988742 222112222334444333334566777889999999999887543211 111 24566544 56788 Q ss_pred HHHHHHHHHHHhCCCCCHHHHHHHhCCCCCCCcceeeeccccccccccccccCCCCCCCCCCCCCCCCCC Q lcl|Aclame:pro 360 KTRYEAYRTGIQGGFLKPNEARSKEDLPPEAGGDRLLVNGNMLPIDMAGQAYLKGGDTNGEVSKEGNEGN 429 (429) Q Consensus 360 ~~~~~~~~~~~~~g~~t~NE~R~~~Gl~~~~~gD~~~~~~n~~~~~~~~~~~~~~g~~~~~~~~~~~~~n 429 (429) +..++...+++ +-+|+.+|+|.--+... .........+.+..+.+.+......+ T Consensus 385 ~~~a~~~~~l~-------~~~~~~~~ip~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~ 438 (448) T protein:vir:77 385 SAAANLMGMLI-------NAVKDSEDIPTELKALI---------DALPSKMRRALGVVDEVREAVRQPAD 438 (448) T ss_pred HHHHHHhHHHH-------HHHHHHhcCCccCCcCC---------CCCchhcccccCCCCCCCchhhcchh Confidence 88888888875 46899999975321110 00011111222222222222222222 No 134 >protein:vir:98816 Length: 446 # NCBI annotation: hypothetical protein # Family: family:all:32558 # MgeID: mge:1530 # MgeName: Ma-LMM01 # Cross-refs: genbank:acc:YP_851097;genbank:gi:117530254;genbank:GeneID:4484480 Probab=99.64 E-value=4.4e-16 Score=104.77 Aligned_cols=377 Identities=12% Similarity=0.057 Sum_probs=215.4 Q ss_pred Cchhhhhhcccccc-cccccccC---------CchHHHHHhhcCCC-Ccceechhhhhc-cHHHHHHHHHHHHhhccCce Q lcl|Aclame:pro 1 MDSVKKFFNFEKRQ-TSQVIELN---------KDDEKLLEWLGISP-STISVKGKNALK-VATVFACIKILSESVSKLPL 68 (429) Q Consensus 1 Mg~~~~~~~~~~~~-~~~~~~~~---------~~~~~~~~~~~~~~-~~~~~~~~~a~~-~~~v~~~i~~ia~~ia~~~~ 68 (429) |+.-=+ +..... ..+..... .+.+.+..-.|... ....+ .+.+++ -+.|.+|++.+...|.+++| T Consensus 1 ~~~~~~--~~p~~~~~~~~~~~~~~~~~~~g~~~~D~~lr~~gg~~~~~~~l-~~~m~e~D~~v~s~l~~Rk~av~~~~w 77 (446) T protein:vir:98 1 MNMEVR--NAPTPAIRRRTIYAMEHLGLATSYLSEDGGYKRAGKPTYQQLSA-WDEAAQTEPIIAQGLDSIALSVLNKVG 77 (446) T ss_pred Cccccc--CCCchhhhhhhhhccccchhhcccCCcchHhhhcCCChHHHHHH-HHHHHhcchHHHHHHHHHHHHhhcCCc Confidence 222100 000000 00000000 01111111111100 00011 233443 68999999999999999999 Q ss_pred EEEecCCceeeeeecchhhhhhcccCcCCCCHHHHHHHHHHHHHhhCCeEEEEeeCCC-Cc--eEE----EEeeCCcceE Q lcl|Aclame:pro 69 KIYQEDEYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRK-GK--VQA----LWPIDASKVT 141 (429) Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~l~~~PN~~~s~~~~~~~~~~~~l~~G~~~~~~~~~~~-g~--~~~----l~~l~p~~v~ 141 (429) .|...+++ ...-+..+|.... .+.....+.+.+.+|-++.+++.... |. +.. +....|..+. T Consensus 78 ~V~p~~~~-----~a~~v~~~l~~~~------~~~~~~~~ldai~~G~s~~Eivw~~~~g~~~p~~~~d~~~~~~~~~~r 146 (446) T protein:vir:98 78 PYQHGDKR-----IKKFIDDQLRNRA------KTWISHCVKSIMTYGFSLSEQIYAHGARDNMPATVLDDIVNYHPLQVM 146 (446) T ss_pred eecCccHH-----HHHHHHHHHhhcC------chhHHHHHHHHHhhCceeeeEEEeecccccccchhhccccccccccce Confidence 99764332 1123444554221 24444457788999999999877432 21 111 1112222222 Q ss_pred EEEcCCcceeee---------------------eeEEEeecccCceEEEccceEEEeecCCCCCcccccCHHHHHHHHHH Q lcl|Aclame:pro 142 VYIDDVGLLNSK---------------------TKMWYVVNTGGQQRVLKPEEILHFKNGITLDGLVGVPTMEYLKSTLE 200 (429) Q Consensus 142 ~~~~~~~~~~~~---------------------~~~~~~~~~~g~~~~~~~~evih~~~~~~~~~~~G~s~~~~~~~~i~ 200 (429) ...+.+...... ..........|....+|...++|+++....+.++|.|.+..+.-... T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~iP~~kfi~~~~~~~~~~p~G~gLlr~~~w~~~ 226 (446) T protein:vir:98 147 LIANDNGRIVDGDTVTASQYKSGYWVPLPPYRIGDPPKKVDVVGSHVRLPSHKRLFINYNTKGNNPWGTSCLTSVLDYSI 226 (446) T ss_pred eeeccCCccccccccchhhcccccccCcccchhhhhhhhcccCcccccccccceEEEEecCCCCCccccchHHHHHHHHH Confidence 222221111000 00000112233445688888888888777788999999999999999 Q ss_pred HHHHHHHHHHHHHHccCCcceEEEeCCCCCHHHH---------HHHHHHHHHHhccc-cccccee---ecCCCceeEecC Q lcl|Aclame:pro 201 NSASADKFINNFYKQGLQVKGLVQYVGDLNEDAK---------KVFRENFESMSSGL-QNSHRIA---LMPVGYQFQPIS 267 (429) Q Consensus 201 ~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~~e~~---------~~~~~~~~~~~~g~-~~~~~~~---vl~~g~~~~~~~ 267 (429) ......+....+.+.-|.|--+.+.+.+.++++. +...+.+.++.... .+++.++ +++.|++++-++ T Consensus 227 fK~~~~~~w~~f~E~yG~P~~vGkyp~ga~~~~~~~~~~~~~~~~~~~~L~~av~~~~~da~~ii~~~~~P~g~eie~~e 306 (446) T protein:vir:98 227 FKRAFRDMMLIALDRYGTPLIYVIVPPGNTGVVEEAPDGTEITTTIAEQAEDALRRLSTDSGLVLTQLSKEQPVQVGALT 306 (446) T ss_pred HHHhhHHHHHHHHhHcCCceeEEeecCCCCcccccchhHHHHHHHHHHHHHHHHHhccccceeeeecccCCCCceEEeec Confidence 9999999999999999999999998776653322 11223344444221 2222222 348899888765 Q ss_pred CChh-HHHHHHHHHHHHHHHHHHhcCChhhcCCcccccccc-HHHHHHHHHHHHHhHHHHHHHHHHHHhhccchhhcc-- Q lcl|Aclame:pro 268 LNMS-DAQFLENTELTIRQIATAFGIKMHQLNDLSKATLNN-IEQQQQQFYTDTLQATLTMYEQEMTYKLFLDSELDK-- 343 (429) Q Consensus 268 ~~~~-d~~~~e~~~~~~~~Ia~~fgvp~~~l~~~~~~~~~n-~~~~~~~~~~~~l~P~~~~i~~~l~~~ll~~~~~~~-- 343 (429) .... ...+.+..++.-++|+.+.......++......+++ ..+.........+.-.+++|++.||+.|+.+--... T Consensus 307 a~~~~~~~~~~~i~~~d~~IskaiLg~~Ltl~~~~~~~GS~ala~vh~~V~~d~~~aDa~~i~~tln~~Li~~l~~lNf~ 386 (446) T protein:vir:98 307 TGNNFSDSFERAISLCDNNMLMGMGIPNLLVQNRETTFGTGRASEIQLELFDGKINSIFDTVIHAFTEQVIGNLIRLNFD 386 (446) T ss_pred cccCChhhHHHHHHHHHHHHHHHHhcccccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC Confidence 4322 234788899999999999876555554433222222 233445566777888999999999987753321100 Q ss_pred ---------hhhhhhhhhhHhhhhHHHHHHHHHHHHhCCCCCH---HHHHHHhCCCCCCCcce Q lcl|Aclame:pro 344 ---------GFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKP---NEARSKEDLPPEAGGDR 394 (429) Q Consensus 344 ---------~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~---NE~R~~~Gl~~~~~gD~ 394 (429) .-+++|++. ...|++..++...++++.|++++ +.+|+.+|+|+-+. |. T Consensus 387 ~~~~~~~~~~~~~~~~~~--e~eDl~~~a~~~~~L~~~G~~~p~~~~~ire~~giP~~~~-~~ 446 (446) T protein:vir:98 387 PALYPLASNTGYITRLPG--RATDLAALVEAIKQMHDMGFLVDGDKDHIRSITGLPDAIS-ST 446 (446) T ss_pred ccccccccccccceeccC--ChhhHHHHHHHHHHHHhCCccccccHHHHHHHhCcCCCCC-CC Confidence 012344443 46788999999999999998764 45999999986421 11 No 135 >protein:vir:102426 Length: 631 # NCBI annotation: gp11 # Family: family:all:2798 # MgeID: mge:1618 # MgeName: Pipefish # Cross-refs: genbank:acc:YP_655288;genbank:gi:109521851;genbank:GeneID:4157741 Probab=99.61 E-value=1.3e-16 Score=107.60 Aligned_cols=416 Identities=13% Similarity=0.141 Sum_probs=246.2 Q ss_pred Cchhhhhhccccccc-cc---ccccCC------chHHHHHh-hc-CCCCcceechhhhhc-cHHHHHHHHHHHHhhccCc Q lcl|Aclame:pro 1 MDSVKKFFNFEKRQT-SQ---VIELNK------DDEKLLEW-LG-ISPSTISVKGKNALK-VATVFACIKILSESVSKLP 67 (429) Q Consensus 1 Mg~~~~~~~~~~~~~-~~---~~~~~~------~~~~~~~~-~~-~~~~~~~~~~~~a~~-~~~v~~~i~~ia~~ia~~~ 67 (429) |.--+.+. ..++.+ +. .+.... +....+.+ .| ...+.+....-.++. .+.+...+.+|++++|++. T Consensus 1 ~~a~~~lr-~~rrpkg~~~a~~r~L~aAs~~~~dpg~~~~~~~g~~~~~~WQ~eAW~~~d~v~Elry~vgW~~~s~sr~r 79 (631) T protein:vir:10 1 MAATQSLR-LVRRPKGGRPAPSRALTAASQPLPDPSQVFSKSTGISRNSDWQTDAWEAVDLVGELRYYVGWRASSCSRCR 79 (631) T ss_pred CCccccee-eeecCCCCCccchhhhhhhhccccchhhhhhhhcCCcccchhhHHHHHHHHhhhhHHHHhhhhhhhhceee Confidence 54433221 111222 11 111000 00111111 11 111122222223443 4888999999999999999 Q ss_pred eEEEecCCc-----eeeeee--c-chhhhhhcccCcCCCCHHHHHHHHHHHHHhhCCeEEEEee-CCC-------Cc--- Q lcl|Aclame:pro 68 LKIYQEDEY-----GIQRGT--K-HYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEF-DRK-------GK--- 128 (429) Q Consensus 68 ~~~~~~~~~-----~~~~~~--~-~~~~~~l~~~PN~~~s~~~~~~~~~~~~l~~G~~~~~~~~-~~~-------g~--- 128 (429) +..-+.+.+ |...+. . .....+...-+...+...++.+.+..++-+-|++|+++.- ... |. T Consensus 80 L~as~idpDtg~ptg~iee~~~~~~~v~~~~~~i~gG~lgQ~~llkrl~~~ltV~GE~wiv~l~~p~~~~~~~pd~~~r~ 159 (631) T protein:vir:10 80 LVASELDENTGLPTGGISEDNTEGERVREIVSKIADGTLGQAALTKRVVECLTVPGELWIVILTRPVKGAPAQPDGSVRT 159 (631) T ss_pred eEeeeeccCCCCCccccccCCchhHHHHHHHHhcCCCcchHHHHHHHHHhheecccceEEEEEeccCcCCCCCccccccc Confidence 999888754 211110 0 1233334435677789999999999999999999998733 222 11 Q ss_pred eEEEEeeCCcceEEEEcCCcceeeeeeEEEeecccCceEEEcc-ce-EEEeecCCCCCcccccCHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 129 VQALWPIDASKVTVYIDDVGLLNSKTKMWYVVNTGGQQRVLKP-EE-ILHFKNGITLDGLVGVPTMEYLKSTLENSASAD 206 (429) Q Consensus 129 ~~~l~~l~p~~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~-~e-vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~ 206 (429) ..+++++....|+..-.+++ .. .....|..-+|-. .+ ++.+=++.|.......||+.++...+.-..... T Consensus 160 ~~~W~~vt~~ei~~~~~g~g------~~--v~lp~g~~h~~~~~~D~l~RiW~P~prr~~e~dSpvra~l~~l~Ei~~~t 231 (631) T protein:vir:10 160 RQEWYAVSKEEIKKSNKGSG------TN--IVLPTGEEHEFVKGTDIIFRVWIPKPRKASEPDSPVRAVLDSIREIVRTT 231 (631) T ss_pred ccceeeccHHHHhcccCccc------ce--eecCCCCccceecCCceEEEeeCCCcccccCCcchhHHHHHHHHHHHHhh Confidence 33677777666654322211 11 1112233333322 23 233335667777889999999999999999998 Q ss_pred HHHHHHHHccCCcceEEEeCCCCCH---------------------HHHHHHHHHHH----HHhcc--cccccceeecC- Q lcl|Aclame:pro 207 KFINNFYKQGLQVKGLVQYVGDLNE---------------------DAKKVFRENFE----SMSSG--LQNSHRIALMP- 258 (429) Q Consensus 207 ~~~~~~~~ng~~~~~~~~~~~~~~~---------------------e~~~~~~~~~~----~~~~g--~~~~~~~~vl~- 258 (429) +...+..+....-.|++.++..++= ....++.+.+. ..+.. +..+--++++. T Consensus 232 ~~i~aaakSRl~gnGvlflP~els~P~~~~~~~~~~g~~v~~~~g~pa~~~l~~~l~q~a~tai~De~S~aA~vPii~~~ 311 (631) T protein:vir:10 232 KTIANASKSRLIGNGVLFVPHEMSLPAAQGPVSEVEGEEIAPLVGEPAVQQLTDMLFQVAETAVEDEDSQAAFIPVIAGV 311 (631) T ss_pred hHHHHHHHHHHhhCceeEeccccccCCCCCCCCCcCCccCCccccchhHHHHHHHHHHHHhhhhcCCCCccceeeeeEee Confidence 8888888888888899987765431 13444444443 33322 22233344443 Q ss_pred -----CCceeEecCCChhHHHHHHHHHHHHHHHHHHhcCChhhcCCc-cccccccHHHHHHHHHHHHHhHHHHHHHHHHH Q lcl|Aclame:pro 259 -----VGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDL-SKATLNNIEQQQQQFYTDTLQATLTMYEQEMT 332 (429) Q Consensus 259 -----~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~fgvp~~~l~~~-~~~~~~n~~~~~~~~~~~~l~P~~~~i~~~l~ 332 (429) ++++...+.....+. -+..++..++.+|..+-|||+.|-+. .++|.-+.-+....-++--|.|++..||++|+ T Consensus 312 p~E~i~~i~hlkf~~ei~e~-aiktR~daI~RlA~glDi~pE~LLGlGsd~NHWsAWqI~dedVrlHI~P~l~lic~AlT 390 (631) T protein:vir:10 312 PGEQIKDVKHIRFDNEITEV-AIKTRNDAIARLAMGLDVSPERLLGLGSQTNHWSAWQISDEDVQLHIAPVMEIFCQALT 390 (631) T ss_pred chHHhcCeeEEeecCchhHH-HHhhHHHHHHHHHhccCCchhhheeccCCccceEEEEecccceeeecchHHHHHHHHHH Confidence 355555566555555 46899999999999999999887555 57888887777788888899999999999999 Q ss_pred Hhhccchhhcc-----hhhhhhhhhhHhhhhHHHHHHHHHHHHhCCCCCHHHHHHHhCCCCCCCcc-------------- Q lcl|Aclame:pro 333 YKLFLDSELDK-----GFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEAGGD-------------- 393 (429) Q Consensus 333 ~~ll~~~~~~~-----~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~Gl~~~~~gD-------------- 393 (429) +.+|.+..-.. .|.+.||.+.|.. + -.+.+.+..++..|.||-...|+.+|+....+-| T Consensus 391 ~q~Lrp~Le~eGvDp~kYvvW~DaS~Lt~-d-Pdr~deA~qa~drGAIt~eAlrk~lGf~eDd~yd~~t~e~~~~~a~~a 468 (631) T protein:vir:10 391 DQILRVTLAREGIDPSKYVVWYDPSQLTI-D-PDKSDEAKFAYENGAINGEALRKYLGLGDDAGYDFTTREGWVMWAQDA 468 (631) T ss_pred hhHHHHHHHHhCCCHHHhEeeecCccccc-C-CCCcHHHHHHHHcCCcCHHHHHHHhcCchhcccCcCchHHHHHHHHHH Confidence 99876544333 3789999998743 2 2344556778899999999999999998754422 Q ss_pred ----eeeecccccc--------ccc-cccccCCCCCCCCCCCCCCCCCC Q lcl|Aclame:pro 394 ----RLLVNGNMLP--------IDM-AGQAYLKGGDTNGEVSKEGNEGN 429 (429) Q Consensus 394 ----~~~~~~n~~~--------~~~-~~~~~~~~g~~~~~~~~~~~~~n 429 (429) .-+.| +++| +.. ..+.+..+|+++.+.+..+.++. T Consensus 469 v~~dpaLip-~lApl~~~~~~~v~~P~~~a~~~~g~ed~~~~~~~~~g~ 516 (631) T protein:vir:10 469 VSKDPTLIP-MLAPLIAGVLKQIEFPQQQAIDSGGNEDTSDADDLDDGE 516 (631) T ss_pred hhcccCcch-hhHHHHHHHhhhccCCCCCCCCCCCCCccccccccccCC Confidence 11111 1111 000 01122223333322222111111 No 136 >protein:vir:8654 Length: 629 # NCBI annotation: gp12 # Family: family:all:2798 # MgeID: mge:156 # MgeName: Rosebush # Cross-refs: genbank:acc:NP_817773;genbank:gi:29566205;genbank:GeneID:1259465 Probab=99.61 E-value=1.5e-16 Score=107.29 Aligned_cols=411 Identities=11% Similarity=0.099 Sum_probs=241.5 Q ss_pred Cchhhhhhcccccccccccc------------cCCchHHHHHhh-cCCCCcceechhhhhc-cHHHHHHHHHHHHhhccC Q lcl|Aclame:pro 1 MDSVKKFFNFEKRQTSQVIE------------LNKDDEKLLEWL-GISPSTISVKGKNALK-VATVFACIKILSESVSKL 66 (429) Q Consensus 1 Mg~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~-~~~~~~~~~~~~~a~~-~~~v~~~i~~ia~~ia~~ 66 (429) |.--+ .+..+|.|+.+.. +..+...+-... +...+.+....-.++. .+.+...+.+|++++|++ T Consensus 1 ma~~~--lr~~rrpk~~p~~~r~~al~aas~~i~~p~~~~~ks~~~~~~~~WQ~eAW~~~d~v~Elry~vgW~~~s~Sr~ 78 (629) T protein:vir:86 1 MAPTS--LRIVRRPKSEPVSTRQRALVAASQPVENPGKAFRKAMGSSTRTDWQEDAWKAYDAVGELRYYVGWRSSSASRV 78 (629) T ss_pred CCccc--eeeeecCCCCChhhhhhhhhhhhhccccccchhhhhcCCCchhhhhHHHHHHHHhhhhHHHHhhhhhhhhcee Confidence 44321 1122233332221 001111111111 1112222222233444 688899999999999999 Q ss_pred ceEEEecCCceee----eeecchh----hhhhcccCcCCCCHHHHHHHHHHHHHhhCCeEEEEeeCCCCce-------EE Q lcl|Aclame:pro 67 PLKIYQEDEYGIQ----RGTKHYL----NNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKV-------QA 131 (429) Q Consensus 67 ~~~~~~~~~~~~~----~~~~~~~----~~~l~~~PN~~~s~~~~~~~~~~~~l~~G~~~~~~~~~~~g~~-------~~ 131 (429) .+..-+.+.++.. .+..+++ ..+...--...+...++++.+..++-+-|++|+++.-...|.. .+ T Consensus 79 rL~as~idpDtg~ptg~i~e~~~~~~~v~~~v~~i~gG~lgqa~lLkr~~~~ltV~GE~wiv~~~~~~~~~d~~~~~~~e 158 (629) T protein:vir:86 79 RLIASAIDPDTGLPTGSIDEDDRVGARVQQIVNQIAGGALGQAQLIKRVVEQLTVAGETWVAILFTDKSRLDSNGNPVPE 158 (629) T ss_pred eeEeeeecCCCCCCccccCCCchhHHHHHHHHHhhcCChhhHHHHHHHHHhheecccceEEEEeecCCCccCCCCcchhh Confidence 9999888744321 1112222 2223222334456789999999999999999999875444332 34 Q ss_pred EEeeCCcceEEEEcCCcceeeeeeEEEeecccCceEEEccceEEEee--cCCCCCcccccCHHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 132 LWPIDASKVTVYIDDVGLLNSKTKMWYVVNTGGQQRVLKPEEILHFK--NGITLDGLVGVPTMEYLKSTLENSASADKFI 209 (429) Q Consensus 132 l~~l~p~~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~evih~~--~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~ 209 (429) ++.+-++.|+-..+ ........|...+|-...=+.|| ++.|.......||+.++...+.-...+.+.. T Consensus 159 W~~vt~~ei~~~~~----------~~~i~lP~g~~~e~~~~~d~l~RiW~P~Prr~~e~DSpvra~l~~l~Ei~~lt~~i 228 (629) T protein:vir:86 159 WLALTPEEVRASEK----------KTIIELPTGDKHEFRDGLDGMFRVWNPRARRAREPDSPVRANLDSLKEIVRTTKTI 228 (629) T ss_pred heeechHHhhhccC----------ceeeEcCCCCcceeeCCCceEEEeeCCCcccccCCcchhHHHHHHHHHHHHhhhHH Confidence 55565555542111 12233344444454433333355 4566667789999999999999888888888 Q ss_pred HHHHHccCCcceEEEeCCCCC----------------------HHHHHHHHHHHH----HHhcc--cccccceeecC--- Q lcl|Aclame:pro 210 NNFYKQGLQVKGLVQYVGDLN----------------------EDAKKVFRENFE----SMSSG--LQNSHRIALMP--- 258 (429) Q Consensus 210 ~~~~~ng~~~~~~~~~~~~~~----------------------~e~~~~~~~~~~----~~~~g--~~~~~~~~vl~--- 258 (429) .+..+....-.|++.++..++ ....+++.+.|. ..+.. +..+--++++. T Consensus 229 ~aaakSRL~gnGvlflP~e~slP~~~~p~~~n~pg~~~p~~~~~pa~~~l~~~l~q~a~tAi~De~S~aA~vPiia~~P~ 308 (629) T protein:vir:86 229 ANASKSRLIGNGVVFVPHEMSLPSMNAPVASNKPGAPAPPILGTPAVQQLQELLFQVAQTAYDDEDSMAALIPMFAAAPG 308 (629) T ss_pred HHHHHHHHhhCceeeeccCcccCccCCCCCCCCCCcccccccccchHHHHHHHHHHHHhhhhcCCCCccceeeeeEeech Confidence 888888878888876665432 013344555444 33332 22233344443 Q ss_pred ---CCceeEecCCChhHHHHHHHHHHHHHHHHHHhcCChhhcCCc-cccccccHHHHHHHHHHHHHhHHHHHHHHHHHHh Q lcl|Aclame:pro 259 ---VGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDL-SKATLNNIEQQQQQFYTDTLQATLTMYEQEMTYK 334 (429) Q Consensus 259 ---~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~fgvp~~~l~~~-~~~~~~n~~~~~~~~~~~~l~P~~~~i~~~l~~~ 334 (429) ++++...+.....+. -+..++..++.+|..+-|||+.|-+. .++|.-+.-+....-++--|.|.+..||++|++. T Consensus 309 E~i~~i~hlkf~~ei~e~-aiktR~daI~RlA~glDippE~LLGlGsd~NHWsAWqI~dedvrlHI~P~l~~ic~AlT~~ 387 (629) T protein:vir:86 309 ELIKNVTHLKFDNQVTEV-AIKTRNDAIARLAMGLDVSPERLLGLGSNSNHWSAWQIGDEDVRLHILPPVEMLCEAITNQ 387 (629) T ss_pred HHhcCeeEEeecCchhHH-HHhhHHHHHHHHHhccCCchhhheeccCCccceEEEEecccceeeecchHHHHHHHHHHhh Confidence 355555566555555 46899999999999999999887555 5788888777778888889999999999999999 Q ss_pred hccchhhcc-----hhhhhhhhhhHhhhhHHHHHHHHHHHHhCCCCCHHHHHHHhCCCCCCCcc-------------eee Q lcl|Aclame:pro 335 LFLDSELDK-----GFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEAGGD-------------RLL 396 (429) Q Consensus 335 ll~~~~~~~-----~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~Gl~~~~~gD-------------~~~ 396 (429) +|.+..-.. .|.++||.+.|.. + -.+.+.+..++..|.||-...|+.+|+....+-| .+- T Consensus 388 ~Lrp~Le~eGiDp~kYvvW~DaS~Lt~-d-Pd~~deA~~a~drGAIt~eAlrk~lGf~eD~~yd~tt~E~~~~~a~d~V~ 465 (629) T protein:vir:86 388 VLRTVLMREGIDPNAYVVWHDASQLTV-D-PDKTDEARDAFDRGAITAEAMVKMLGLADDTVYDFTTPEGWAQWARDRVG 465 (629) T ss_pred HHHHHHHHhCCCHHHhEeeecCccccc-C-CCCcHHHHHHHHcCCcCHHHHHHHhcCccccccCCCchHHHHHHHHHhhh Confidence 876544333 3788999998743 2 2344556778899999999999999998754332 111 Q ss_pred ecccc---------------ccccccccccCCCCCCCCCCCC---------CCCCCC Q lcl|Aclame:pro 397 VNGNM---------------LPIDMAGQAYLKGGDTNGEVSK---------EGNEGN 429 (429) Q Consensus 397 ~~~n~---------------~~~~~~~~~~~~~g~~~~~~~~---------~~~~~n 429 (429) ..-.. .|... ..++.++.++..+. ..+|++ T Consensus 466 ~~P~Li~~~a~l~~~~a~~~~P~~~---~~~pp~~e~~~~dE~sga~~~~ep~te~d 519 (629) T protein:vir:86 466 QDPNLLPTLAVLIPELADVEFPTPT---VALPPAEEQDGDEEASGASRREEPDTEDD 519 (629) T ss_pred hCcchhhhhhhhhhhhcccccCccC---CCCCccccCCCcccccCCCcCCCCCCCCC Confidence 00010 01111 11111111111111 111111 No 137 >protein:vir:99088 Length: 629 # NCBI annotation: gp12 # Family: family:all:2798 # MgeID: mge:1608 # MgeName: Qyrzula # Cross-refs: genbank:acc:YP_655692;genbank:gi:109521770;genbank:GeneID:4157810 Probab=99.59 E-value=2.4e-16 Score=106.17 Aligned_cols=410 Identities=11% Similarity=0.108 Sum_probs=240.7 Q ss_pred Cchhhhhhcccccccccccc------------cCCchHHHHHhh-cCCCCcceechhhhhc-cHHHHHHHHHHHHhhccC Q lcl|Aclame:pro 1 MDSVKKFFNFEKRQTSQVIE------------LNKDDEKLLEWL-GISPSTISVKGKNALK-VATVFACIKILSESVSKL 66 (429) Q Consensus 1 Mg~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~-~~~~~~~~~~~~~a~~-~~~v~~~i~~ia~~ia~~ 66 (429) |.--+ .+..+|.|+.+.. +..+...+-... +...+.+....-.++. .+.+...+.+|++++|++ T Consensus 1 ma~~~--lr~~rrpk~~p~~~r~~al~aas~~i~~p~~~~~ks~~~~~~~~WQ~eAW~~~d~v~Elry~vgW~~~s~Sr~ 78 (629) T protein:vir:99 1 MAPTS--LRIVRRPKSEPVSTRQRALVAASQPVENPGKAFRKAMGSSTRTDWQDDAWKAYDAVGELRYYVGWRSSSASRV 78 (629) T ss_pred CCccc--eeeeecCCCCChhhhhhhhhhhhhcccccchhhhhhcCCCchhhhhHHHHHHHHhhhhHHHHhhhhhhhhcee Confidence 44321 1122233332221 001111111111 1112222222233444 688899999999999999 Q ss_pred ceEEEecCCceee----eeecchh----hhhhcccCcCCCCHHHHHHHHHHHHHhhCCeEEEEeeCCCCce-------EE Q lcl|Aclame:pro 67 PLKIYQEDEYGIQ----RGTKHYL----NNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKV-------QA 131 (429) Q Consensus 67 ~~~~~~~~~~~~~----~~~~~~~----~~~l~~~PN~~~s~~~~~~~~~~~~l~~G~~~~~~~~~~~g~~-------~~ 131 (429) .+..-+.+.++.. .+..+++ ..+...--...+...++++.+..++-+-|++|+++.-...|.. .+ T Consensus 79 rL~as~idpDtg~ptg~i~e~~~~~~~v~~~v~~i~gG~lgqa~lLkr~~~~ltV~GE~wiv~~~~~~~~~d~~~~~~~e 158 (629) T protein:vir:99 79 RLIASAIDPDTGLPTGSIDEDDRVGARVQQIVNQIAGGALGQAQLIKRVVEQLTVAGETWVAILFTDKSRLDSNGNPVPE 158 (629) T ss_pred eeEeeeecCCCCCCccccCCCchhHHHHHHHHHhhcCChhhHHHHHHHHHhheecccceEEEEeecCCCccCCCCcchhh Confidence 9999888744321 1112222 2223222334456789999999999999999999875444332 34 Q ss_pred EEeeCCcceEEEEcCCcceeeeeeEEEeecccCceEEEc-cceEEEee--cCCCCCcccccCHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 132 LWPIDASKVTVYIDDVGLLNSKTKMWYVVNTGGQQRVLK-PEEILHFK--NGITLDGLVGVPTMEYLKSTLENSASADKF 208 (429) Q Consensus 132 l~~l~p~~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~-~~evih~~--~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~ 208 (429) ++.+-++.|+-..++ .......|...+|- ..+++ || ++.|.......||+.++...+.-...+.+. T Consensus 159 W~~vt~~ei~~~~~~----------~~i~lP~g~~~e~~~~~d~l-~RiW~P~Prr~~e~DSpvra~l~~l~Ei~~lt~~ 227 (629) T protein:vir:99 159 WLALTPEEVRASEKK----------TIIELPTGDKHEFRDGLDGM-FRVWNPRARRAREPDSPVRANLDSLKEIVRTTKT 227 (629) T ss_pred heeechHHhhhccCc----------eeEEcCCCCccceeCCCceE-EEeeCCCcccccCCcchhHHHHHHHHHHHHhhhH Confidence 555665555421111 12233334444443 33433 55 456667778999999999999988888888 Q ss_pred HHHHHHccCCcceEEEeCCCCC----------------------HHHHHHHHHHHH----HHhcc--cccccceeecC-- Q lcl|Aclame:pro 209 INNFYKQGLQVKGLVQYVGDLN----------------------EDAKKVFRENFE----SMSSG--LQNSHRIALMP-- 258 (429) Q Consensus 209 ~~~~~~ng~~~~~~~~~~~~~~----------------------~e~~~~~~~~~~----~~~~g--~~~~~~~~vl~-- 258 (429) ..+..+....-.|++.++..++ ....+++.+.|. ..+.. +..+--++++. T Consensus 228 i~aaakSRL~gnGvlflP~e~slP~~~~p~~~n~pg~~~p~~~~~pa~~~l~~~l~q~a~tAi~De~S~aA~vPiia~~P 307 (629) T protein:vir:99 228 IANASKSRLIGNGVVFVPHEMSLPSMNAPVASNKPGAPAPPILGTPAVQQLQELLFQVAQTAYDDEDSMAALIPMFAAAP 307 (629) T ss_pred HHHHHHHHHhhCceeEeccCcccCccCCCCCCCCCCcccccccccchHHHHHHHHHHHHhhhhcCCCCccceeeeeEeec Confidence 8888888878888876665432 013344555444 33332 22233344443 Q ss_pred ----CCceeEecCCChhHHHHHHHHHHHHHHHHHHhcCChhhcCCc-cccccccHHHHHHHHHHHHHhHHHHHHHHHHHH Q lcl|Aclame:pro 259 ----VGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDL-SKATLNNIEQQQQQFYTDTLQATLTMYEQEMTY 333 (429) Q Consensus 259 ----~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~fgvp~~~l~~~-~~~~~~n~~~~~~~~~~~~l~P~~~~i~~~l~~ 333 (429) ++++...+.....+. -+..++..++.+|..+-|||+.|-+. .++|.-+.-+....-++--|.|.+..||++|++ T Consensus 308 ~E~i~~i~hlkf~~ei~e~-aiktR~daI~RlA~glDippE~LLGlGsd~NHWsAWqI~dedvrlHI~P~l~~ic~AlT~ 386 (629) T protein:vir:99 308 GELIKNVTHLKFDNQVTEV-AIKTRNDAIARLAMGLDVSPERLLGLGSNSNHWSAWQIGDEDVRLHILPPVEMLCEAITN 386 (629) T ss_pred hHHhcCeeEEeecCchhHH-HHhhHHHHHHHHHhccCCchhhheeccCCccceEEEEecccceeeecchhHHHHHHHHHh Confidence 355555566555555 46899999999999999999887555 578888877777888888999999999999999 Q ss_pred hhccchhhcc-----hhhhhhhhhhHhhhhHHHHHHHHHHHHhCCCCCHHHHHHHhCCCCCCCcc-------------ee Q lcl|Aclame:pro 334 KLFLDSELDK-----GFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEAGGD-------------RL 395 (429) Q Consensus 334 ~ll~~~~~~~-----~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~Gl~~~~~gD-------------~~ 395 (429) .+|.+..-.. .|.++||.+.|.. + -.+.+.+..++..|.||-...|+.+|+....+-| .+ T Consensus 387 ~~Lrp~Le~eGiDp~kYvvW~DaS~Lt~-d-Pd~~deA~~a~drGAIt~eAlrk~lGf~eD~~yd~tt~E~~~~~a~d~V 464 (629) T protein:vir:99 387 QVLRTVLMREGIDPNAYVVWHDASQLTV-D-PDKTDEARDAFDRGAITAEAMVKMLGLADDTVYDFTTPEGWAQWARDRV 464 (629) T ss_pred hHHHHHHHHhCCCHHHhEeeecCccccc-C-CCCcHHHHHHHHcCCccHHHHHHHhcCccccccCCCchHHHHHHHHHhh Confidence 9876544333 3788999998743 2 2344556778899999999999999998754332 11 Q ss_pred eecccc---------------ccccccccccCCCCCCCCCCCC---------CCCCCC Q lcl|Aclame:pro 396 LVNGNM---------------LPIDMAGQAYLKGGDTNGEVSK---------EGNEGN 429 (429) Q Consensus 396 ~~~~n~---------------~~~~~~~~~~~~~g~~~~~~~~---------~~~~~n 429 (429) -..-.. .|.... .++.++.++..+. ..+|++ T Consensus 465 ~~~P~Li~~~a~l~~~~a~~~~P~~~~---~~pp~~e~~~~dE~sga~~~~ep~te~d 519 (629) T protein:vir:99 465 GQDPNLLPTLAVLIPELADVEFPTPTV---ALPPAEEQDGDEEASGASRREEPDTEDD 519 (629) T ss_pred hhCcchhhhhhhhhhhhcccccCccCC---CCCccccCCCcccccCCCcCCCCCCCCC Confidence 100010 011111 1111111111111 111111 No 138 >protein:vir:107517 Length: 639 # NCBI annotation: gp8 # Family: family:all:2798 # MgeID: mge:1481 # MgeName: PG1 # Cross-refs: genbank:acc:NP_943786;genbank:gi:38638411;genbank:GeneID:2657197 Probab=99.58 E-value=4.3e-16 Score=104.85 Aligned_cols=415 Identities=8% Similarity=0.053 Sum_probs=243.0 Q ss_pred Cchhhhhhccccccccccccc------------CCchHHHHHh-hcCCCCcceechhhhhc-cHHHHHHHHHHHHhhccC Q lcl|Aclame:pro 1 MDSVKKFFNFEKRQTSQVIEL------------NKDDEKLLEW-LGISPSTISVKGKNALK-VATVFACIKILSESVSKL 66 (429) Q Consensus 1 Mg~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~-~~~~~~~~~~~~~~a~~-~~~v~~~i~~ia~~ia~~ 66 (429) |.--+ .+..+|.|+.+... ......+-.+ +|...+.+....-.++. .+.+...+.++++++|++ T Consensus 1 ma~~~--lr~~rrpk~~p~~~rr~~ltaAsq~~~~p~~~~kt~~~~~ar~~WQ~eAW~~~d~v~Elry~vgW~~~s~sr~ 78 (639) T protein:vir:10 1 MAATS--LRVVRRPKGSAPAARRRSLTAASQLITDPQKQMKTSLMGTARNEWQSEAWDFSESIGELSYYVSWRANSCSRT 78 (639) T ss_pred CCccc--eeeeecCCCCCcchhhHHHhhhhhccCCcccchhhhccccchhhhhhhhhhhhhhhhhHHHHhhhhhhhhcee Confidence 54421 11222333322110 0111112222 22222222222223343 488899999999999999 Q ss_pred ceEEEecCCcee-e----eeec----chhhhhhcccCcCCCCHHHHHHHHHHHHHhhCCeEEEEe-eCCCCc-------e Q lcl|Aclame:pro 67 PLKIYQEDEYGI-Q----RGTK----HYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIE-FDRKGK-------V 129 (429) Q Consensus 67 ~~~~~~~~~~~~-~----~~~~----~~~~~~l~~~PN~~~s~~~~~~~~~~~~l~~G~~~~~~~-~~~~g~-------~ 129 (429) .+..-+.+.+.. . ..++ +.+......--...+...++++.+..++-+-|++||.++ +...+. . T Consensus 79 rL~as~idpDtg~PtG~V~~E~d~~~~~v~~~v~~iagG~lGqa~llkr~~~~ltV~GE~wi~~l~r~~k~~~~~~~~~~ 158 (639) T protein:vir:10 79 TLIPSAIDPDTGLPTGEVDIEEDPDAQTVADYVKGIADGPLGQAALIKRAVECMTVVGEVWIAVLIRQEKDPVTGLAAPR 158 (639) T ss_pred eeEeeeeccccCCCCCccccccccCcchHHHHHHhhcCccchHHHHHHHHHhheecccceEEEEEEecCccccCcccccc Confidence 999988874332 1 1112 223333322344456778999999999999999998753 333332 2 Q ss_pred EEEEeeCCcceEEEEcCCcceeeeeeEEEeecccCceEEEccceEEEee--cCCCCCcccccCHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 130 QALWPIDASKVTVYIDDVGLLNSKTKMWYVVNTGGQQRVLKPEEILHFK--NGITLDGLVGVPTMEYLKSTLENSASADK 207 (429) Q Consensus 130 ~~l~~l~p~~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~evih~~--~~~~~~~~~G~s~~~~~~~~i~~~~~~~~ 207 (429) .+++.+..+.|...-. ...-....+|...+|....=+.|| ++.|.......||+.++...+.-.....+ T Consensus 159 ~~W~vvs~~Ei~~~~~---------~~~~i~lPdG~~he~~~~~d~l~RvW~P~prr~~e~dSpvra~l~~l~Ei~~~t~ 229 (639) T protein:vir:10 159 ARWYAVTREEIKSKAG---------ETAEISLPDGKTHEFNRDLDSLVRIWNPRPRKASQATSPVRACLETLREIERTTR 229 (639) T ss_pred cceeeeeHHHhcccCC---------CeeEeecCCCCCccccCCCceEEEEeCCCcccccCCcchhHHHHHHHHHHHHhhh Confidence 2455555555442111 111122334555555544333344 46666777899999999999999888888 Q ss_pred HHHHHHHccCCcceEEEeCCCCCH-------------------------HHHHHHHHHHHH----Hhcc--cccccceee Q lcl|Aclame:pro 208 FINNFYKQGLQVKGLVQYVGDLNE-------------------------DAKKVFRENFES----MSSG--LQNSHRIAL 256 (429) Q Consensus 208 ~~~~~~~ng~~~~~~~~~~~~~~~-------------------------e~~~~~~~~~~~----~~~g--~~~~~~~~v 256 (429) ...+..+....-.|++.++..++- ...+.+...|.+ .+.. +..+--+++ T Consensus 230 ~i~aaakSRl~gnGvlfvP~els~p~~~~p~~~~~~~~pg~~v~~~~~~~a~d~l~~~l~qaa~tai~De~S~aA~vPii 309 (639) T protein:vir:10 230 KIKNAAKSRVMNNGVLFVPAEMSLPAAQAPIPAGQAQIPGAPVPEVSGVPASEQLATMIYQASVAAMEDENSQAAYIPLV 309 (639) T ss_pred HHHHHHHHHHhhCceeeeccccCCCCccccccccccccCcccccccCCccchHHHHHHHHHHHHhhhcCCCCccceeeee Confidence 888888888888888877765431 113334444433 3322 222333444 Q ss_pred cC------CCceeEecCCChhHHHHHHHHHHHHHHHHHHhcCChhhcCCccccccccHHHHHHHHHHHHHhHHHHHHHHH Q lcl|Aclame:pro 257 MP------VGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKATLNNIEQQQQQFYTDTLQATLTMYEQE 330 (429) Q Consensus 257 l~------~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~fgvp~~~l~~~~~~~~~n~~~~~~~~~~~~l~P~~~~i~~~ 330 (429) +. ++++...+.....+. -+..++..++.+|..+-|||+.|-+.+++|.-+.-+....-++--|.|.+..|+++ T Consensus 310 a~~p~E~l~~ikhl~f~~ei~e~-aiktR~daI~RlA~glDi~pE~LLGl~d~NHWsAWqI~dedvrlHI~P~l~~icdA 388 (639) T protein:vir:10 310 ASVAAEHLEKVQHIKFGNEVTEV-EIKTRIDAITRLAMGLDVSPERLLGMSKGNHWSAWAIGDEDVQLHIKPVMDLICQA 388 (639) T ss_pred EeechHHhcCeeeeeecCchhHH-HHhhHHHHHHHHHhccCCchhheeecccccceEEEEecccceeeecchhHHHHHHH Confidence 43 345555555555555 46899999999999999999988777888888888878888888999999999999 Q ss_pred HHHhhccchhhcc-----hhhhhhhhhhHhhhhHHHHHHHHHHHHhCCCCCHHHHHHHhCCCCCCCcce----------- Q lcl|Aclame:pro 331 MTYKLFLDSELDK-----GFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEAGGDR----------- 394 (429) Q Consensus 331 l~~~ll~~~~~~~-----~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~Gl~~~~~gD~----------- 394 (429) |++.+|-+..-.. .|.++||.+.|.. + -.+.+.+..++..|.||-.-.|+.+|+...++=|. T Consensus 389 lT~~~Lrp~Le~eGvDp~kYvvW~DaS~Lt~-d-Pd~~deA~qa~drGAIt~eAlR~~lG~~edd~yd~~t~e~~~~~A~ 466 (639) T protein:vir:10 389 IYNDILTPLLAREGIDPTKYILWYDASGLTS-D-PDLSDEAVEAHDRGAITSAALRRLLNVGEDSGYDLTTLDGCREFAA 466 (639) T ss_pred HHhhHHHHHHHHhCCCHHHhEeeecCccccc-C-CCCcHHHHHHHHcCCccHHHHHHHhccccccCCCCCCcHHHHHHHH Confidence 9999876544333 3789999998743 2 23445567789999999999999999976543221 Q ss_pred --eeeccc----ccccccc---------ccccCCCCCCCCCCCCCCCCCC Q lcl|Aclame:pro 395 --LLVNGN----MLPIDMA---------GQAYLKGGDTNGEVSKEGNEGN 429 (429) Q Consensus 395 --~~~~~n----~~~~~~~---------~~~~~~~g~~~~~~~~~~~~~n 429 (429) +..+-. ++|+..+ +....+.++++...+.+.+.+| T Consensus 467 ~~V~~~P~li~~~apl~~P~lq~~e~ptp~~a~~~a~~~~~~de~~ga~~ 516 (639) T protein:vir:10 467 DVVTKNPELIAMYAPLLSSQLAGIEFPQPANAIESTREDEEDDEDSGARQ 516 (639) T ss_pred HHhcCCcchhhhhhhccCccceecccCCCCCCCCCCCCCCCcccccCCCC Confidence 000000 0111100 0111112222222222222222 No 139 >protein:vir:97900 Length: 639 # NCBI annotation: gp8 # Family: family:all:2798 # MgeID: mge:1482 # MgeName: Orion # Cross-refs: genbank:acc:YP_655104;genbank:gi:109391854;genbank:GeneID:4157263 Probab=99.58 E-value=4.3e-16 Score=104.85 Aligned_cols=415 Identities=8% Similarity=0.053 Sum_probs=243.0 Q ss_pred Cchhhhhhccccccccccccc------------CCchHHHHHh-hcCCCCcceechhhhhc-cHHHHHHHHHHHHhhccC Q lcl|Aclame:pro 1 MDSVKKFFNFEKRQTSQVIEL------------NKDDEKLLEW-LGISPSTISVKGKNALK-VATVFACIKILSESVSKL 66 (429) Q Consensus 1 Mg~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~-~~~~~~~~~~~~~~a~~-~~~v~~~i~~ia~~ia~~ 66 (429) |.--+ .+..+|.|+.+... ......+-.+ +|...+.+....-.++. .+.+...+.++++++|++ T Consensus 1 ma~~~--lr~~rrpk~~p~~~rr~~ltaAsq~~~~p~~~~kt~~~~~ar~~WQ~eAW~~~d~v~Elry~vgW~~~s~sr~ 78 (639) T protein:vir:97 1 MAATS--LRVVRRPKGSAPAARRRSLTAASQLITDPQKQMKTSLMGTARNEWQSEAWDFSESIGELSYYVSWRANSCSRT 78 (639) T ss_pred CCccc--eeeeecCCCCCcchhhHHHhhhhhccCCcccchhhhccccchhhhhhhhhhhhhhhhhHHHHhhhhhhhhcee Confidence 54421 11222333322110 0111112222 22222222222223343 488899999999999999 Q ss_pred ceEEEecCCcee-e----eeec----chhhhhhcccCcCCCCHHHHHHHHHHHHHhhCCeEEEEe-eCCCCc-------e Q lcl|Aclame:pro 67 PLKIYQEDEYGI-Q----RGTK----HYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIE-FDRKGK-------V 129 (429) Q Consensus 67 ~~~~~~~~~~~~-~----~~~~----~~~~~~l~~~PN~~~s~~~~~~~~~~~~l~~G~~~~~~~-~~~~g~-------~ 129 (429) .+..-+.+.+.. . ..++ +.+......--...+...++++.+..++-+-|++||.++ +...+. . T Consensus 79 rL~as~idpDtg~PtG~V~~E~d~~~~~v~~~v~~iagG~lGqa~llkr~~~~ltV~GE~wi~~l~r~~k~~~~~~~~~~ 158 (639) T protein:vir:97 79 TLIPSAIDPDTGLPTGEVDIEEDPDAQTVADYVKGIADGPLGQAALIKRAVECMTVVGEVWIAVLIRQEKDPVTGLAAPR 158 (639) T ss_pred eeEeeeeccccCCCCCccccccccCcchHHHHHHhhcCccchHHHHHHHHHhheecccceEEEEEEecCccccCcccccc Confidence 999988874332 1 1112 223333322344456778999999999999999998753 333332 2 Q ss_pred EEEEeeCCcceEEEEcCCcceeeeeeEEEeecccCceEEEccceEEEee--cCCCCCcccccCHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 130 QALWPIDASKVTVYIDDVGLLNSKTKMWYVVNTGGQQRVLKPEEILHFK--NGITLDGLVGVPTMEYLKSTLENSASADK 207 (429) Q Consensus 130 ~~l~~l~p~~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~evih~~--~~~~~~~~~G~s~~~~~~~~i~~~~~~~~ 207 (429) .+++.+..+.|...-. ...-....+|...+|....=+.|| ++.|.......||+.++...+.-.....+ T Consensus 159 ~~W~vvs~~Ei~~~~~---------~~~~i~lPdG~~he~~~~~d~l~RvW~P~prr~~e~dSpvra~l~~l~Ei~~~t~ 229 (639) T protein:vir:97 159 ARWYAVTREEIKSKAG---------ETAEISLPDGKTHEFNRDLDSLVRIWNPRPRKASQATSPVRACLETLREIERTTR 229 (639) T ss_pred cceeeeeHHHhcccCC---------CeeEeecCCCCCccccCCCceEEEEeCCCcccccCCcchhHHHHHHHHHHHHhhh Confidence 2455555555442111 111122334555555544333344 46666777899999999999999888888 Q ss_pred HHHHHHHccCCcceEEEeCCCCCH-------------------------HHHHHHHHHHHH----Hhcc--cccccceee Q lcl|Aclame:pro 208 FINNFYKQGLQVKGLVQYVGDLNE-------------------------DAKKVFRENFES----MSSG--LQNSHRIAL 256 (429) Q Consensus 208 ~~~~~~~ng~~~~~~~~~~~~~~~-------------------------e~~~~~~~~~~~----~~~g--~~~~~~~~v 256 (429) ...+..+....-.|++.++..++- ...+.+...|.+ .+.. +..+--+++ T Consensus 230 ~i~aaakSRl~gnGvlfvP~els~p~~~~p~~~~~~~~pg~~v~~~~~~~a~d~l~~~l~qaa~tai~De~S~aA~vPii 309 (639) T protein:vir:97 230 KIKNAAKSRVMNNGVLFVPAEMSLPAAQAPIPAGQAQIPGAPVPEVSGVPASEQLATMIYQASVAAMEDENSQAAYIPLV 309 (639) T ss_pred HHHHHHHHHHhhCceeeeccccCCCCccccccccccccCcccccccCCccchHHHHHHHHHHHHhhhcCCCCccceeeee Confidence 888888888888888877765431 113334444433 3322 222333444 Q ss_pred cC------CCceeEecCCChhHHHHHHHHHHHHHHHHHHhcCChhhcCCccccccccHHHHHHHHHHHHHhHHHHHHHHH Q lcl|Aclame:pro 257 MP------VGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKATLNNIEQQQQQFYTDTLQATLTMYEQE 330 (429) Q Consensus 257 l~------~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~fgvp~~~l~~~~~~~~~n~~~~~~~~~~~~l~P~~~~i~~~ 330 (429) +. ++++...+.....+. -+..++..++.+|..+-|||+.|-+.+++|.-+.-+....-++--|.|.+..|+++ T Consensus 310 a~~p~E~l~~ikhl~f~~ei~e~-aiktR~daI~RlA~glDi~pE~LLGl~d~NHWsAWqI~dedvrlHI~P~l~~icdA 388 (639) T protein:vir:97 310 ASVAAEHLEKVQHIKFGNEVTEV-EIKTRIDAITRLAMGLDVSPERLLGMSKGNHWSAWAIGDEDVQLHIKPVMDLICQA 388 (639) T ss_pred EeechHHhcCeeeeeecCchhHH-HHhhHHHHHHHHHhccCCchhheeecccccceEEEEecccceeeecchhHHHHHHH Confidence 43 345555555555555 46899999999999999999988777888888888878888888999999999999 Q ss_pred HHHhhccchhhcc-----hhhhhhhhhhHhhhhHHHHHHHHHHHHhCCCCCHHHHHHHhCCCCCCCcce----------- Q lcl|Aclame:pro 331 MTYKLFLDSELDK-----GFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEAGGDR----------- 394 (429) Q Consensus 331 l~~~ll~~~~~~~-----~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~Gl~~~~~gD~----------- 394 (429) |++.+|-+..-.. .|.++||.+.|.. + -.+.+.+..++..|.||-.-.|+.+|+...++=|. T Consensus 389 lT~~~Lrp~Le~eGvDp~kYvvW~DaS~Lt~-d-Pd~~deA~qa~drGAIt~eAlR~~lG~~edd~yd~~t~e~~~~~A~ 466 (639) T protein:vir:97 389 IYNDILTPLLAREGIDPTKYILWYDASGLTS-D-PDLSDEAVEAHDRGAITSAALRRLLNVGEDSGYDLTTLDGCREFAA 466 (639) T ss_pred HHhhHHHHHHHHhCCCHHHhEeeecCccccc-C-CCCcHHHHHHHHcCCccHHHHHHHhccccccCCCCCCcHHHHHHHH Confidence 9999876544333 3789999998743 2 23445567789999999999999999976543221 Q ss_pred --eeeccc----ccccccc---------ccccCCCCCCCCCCCCCCCCCC Q lcl|Aclame:pro 395 --LLVNGN----MLPIDMA---------GQAYLKGGDTNGEVSKEGNEGN 429 (429) Q Consensus 395 --~~~~~n----~~~~~~~---------~~~~~~~g~~~~~~~~~~~~~n 429 (429) +..+-. ++|+..+ +....+.++++...+.+.+.+| T Consensus 467 ~~V~~~P~li~~~apl~~P~lq~~e~ptp~~a~~~a~~~~~~de~~ga~~ 516 (639) T protein:vir:97 467 DVVTKNPELIAMYAPLLSSQLAGIEFPQPANAIESTREDEEDDEDSGARQ 516 (639) T ss_pred HHhcCCcchhhhhhhccCccceecccCCCCCCCCCCCCCCCcccccCCCC Confidence 000000 0111100 0111112222222222222222 No 140 >protein:vir:106027 Length: 629 # NCBI annotation: gp9 # Family: family:all:2798 # MgeID: mge:1505 # MgeName: Cooper # Cross-refs: genbank:acc:YP_654906;genbank:gi:109392362;genbank:GeneID:4157055 Probab=99.53 E-value=5.7e-15 Score=98.68 Aligned_cols=414 Identities=11% Similarity=0.083 Sum_probs=240.4 Q ss_pred Cchhhhhhcccccccccccc------cC--CchHHHHH-hhcCC-CCcceechhhhhc-cHHHHHHHHHHHHhhccCceE Q lcl|Aclame:pro 1 MDSVKKFFNFEKRQTSQVIE------LN--KDDEKLLE-WLGIS-PSTISVKGKNALK-VATVFACIKILSESVSKLPLK 69 (429) Q Consensus 1 Mg~~~~~~~~~~~~~~~~~~------~~--~~~~~~~~-~~~~~-~~~~~~~~~~a~~-~~~v~~~i~~ia~~ia~~~~~ 69 (429) |.--+ .+.-+|.+..+.. .. .+...+.. ..|.. .+.+....-.++. .+.+...+.++++++|++.+. T Consensus 1 ma~~~--lrv~rrpk~~p~~r~l~aasqp~~P~~~~~~~~~g~~~~~~WQ~eAW~~~d~VgElryyvgW~~ss~Sr~rL~ 78 (629) T protein:vir:10 1 MAAST--LRVSRRPKGSPARRSLTAASQPMEPGRTPSRQVAGTVVRTSWQNEAWECMDLVGELRYYVGWRASSCSRVELI 78 (629) T ss_pred CCccc--eeEEecCCCccceeeeccccCCCCcchhhchhhhhhhhhhhhhHHHHHHHHhhhhHHHHhhhhhhhheeeeEE Confidence 44321 0111222211110 00 01111111 11111 1222222223343 478888999999999999999 Q ss_pred EEecCCce-ee---eeecchhh----hhhcccCcCCCCHHHHHHHHHHHHHhhCCeEEEEeeCCCCc----eE-EEEeeC Q lcl|Aclame:pro 70 IYQEDEYG-IQ---RGTKHYLN----NLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGK----VQ-ALWPID 136 (429) Q Consensus 70 ~~~~~~~~-~~---~~~~~~~~----~~l~~~PN~~~s~~~~~~~~~~~~l~~G~~~~~~~~~~~g~----~~-~l~~l~ 136 (429) .-..+.+. .. .+.+||-. .....--...+...++.+.+..++-+-|+.|++++-...+. +. +++.+. T Consensus 79 as~idpDtg~ptg~i~ed~p~~~~v~~~v~~iagG~lGqaqLlkr~~~~ltV~GE~~i~il~~~~~~pd~~~r~~W~vVt 158 (629) T protein:vir:10 79 ASELDPDTGKPTGGIRDDDPDGLRFLEIVKTMAGGPLGQAQLQKRAAECLTVPGEHRICLLDQGDKNPDGSVRHNWYVVT 158 (629) T ss_pred EeeecCCCCCCccccccCchhHHHHHHHHHHhcCccchHHHHHHHHHhheeccCceEEEEeecCCCCCCcccccceeeec Confidence 98877433 21 12233322 22333344556788999999999999999999876544442 23 455555 Q ss_pred CcceEEEEcCCcceeeeeeEEEeecccCceEEEccceEEEee--cCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 137 ASKVTVYIDDVGLLNSKTKMWYVVNTGGQQRVLKPEEILHFK--NGITLDGLVGVPTMEYLKSTLENSASADKFINNFYK 214 (429) Q Consensus 137 p~~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~evih~~--~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ 214 (429) .+.|+.. ..........+|...+|..+.=+.|| ++.|.......||+.++...+.-.....+...+..+ T Consensus 159 ~~Ei~~k---------g~g~~~i~lpdg~~he~~~~~D~l~RvW~P~Prr~~e~DSpvra~l~~lrEi~r~tk~i~~aak 229 (629) T protein:vir:10 159 NDEVKNK---------GAGKTDIELPDGTIHEYSKGRDVMFRVWNPRPRRAKEPDSPVRACLDSLREIIRTTKKIRNASK 229 (629) T ss_pred HHHhccc---------cCceeEEEcCCCceeeeeCCCeeEEEeeCCCcccccCCcchhHHHHHHHHHHHHhhhHhHHHHH Confidence 5554421 11112344455666666554444444 456666778999999999999988888888888888 Q ss_pred ccCCcceEEEeCCCCC------------H----------HHHHHHHHHHHH----Hhcc--cccccceeecC------CC Q lcl|Aclame:pro 215 QGLQVKGLVQYVGDLN------------E----------DAKKVFRENFES----MSSG--LQNSHRIALMP------VG 260 (429) Q Consensus 215 ng~~~~~~~~~~~~~~------------~----------e~~~~~~~~~~~----~~~g--~~~~~~~~vl~------~g 260 (429) ....-.|++.++..++ + ...+.+.+.|.+ .+.. +..+--++++. ++ T Consensus 230 SRL~gnGvlflP~e~slp~~~ap~~~~~Pg~~~p~~~g~aa~d~l~~~l~q~a~aAi~De~S~aA~vPiia~vP~E~l~~ 309 (629) T protein:vir:10 230 SRLIGNGVVFLPQELSLPRATAPVADNQPGAPVPIVDGVAAADELSNLLFQTAAAAVDDEDSQAALIPLLATVPGEHLQK 309 (629) T ss_pred hHHhhCceeEeccCcccccccCCCCCCCCcccccccCCCcchHHHHHHHHHHHHhhhcCCCCccceeeeEEeechHHhcC Confidence 8778888876665432 0 133344444433 3322 22222234432 34 Q ss_pred ceeEecCCChhHHHHHHHHHHHHHHHHHHhcCChhhcCCc-cccccccHHHHHHHHHHHHHhHHHHHHHHHHHHhhccch Q lcl|Aclame:pro 261 YQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDL-SKATLNNIEQQQQQFYTDTLQATLTMYEQEMTYKLFLDS 339 (429) Q Consensus 261 ~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~fgvp~~~l~~~-~~~~~~n~~~~~~~~~~~~l~P~~~~i~~~l~~~ll~~~ 339 (429) ++...+.....+.. +..++..++.+|..+-|||+.|-+. .++|.-+.-|-...-++--|.|.+..|+++|++.+|.+. T Consensus 310 ikhLkf~~eite~~-iktR~daI~RlAmglDispErLLGlGsd~NHWsAWqI~dedvrlHI~P~l~~ic~Ait~~~Lrp~ 388 (629) T protein:vir:10 310 IFHLKIGNEITEVE-IKTRNDAIARLAMGLDVSPERLLGLGSNSNHWSAWQIGDEDVQLHIKPVMEVLCAAIYREVLVAT 388 (629) T ss_pred eeeeeecCchhHHH-HhhHHHHHHHHHhccCCChhheeeccCCccceeeEEecccceeeecchHHHHHHHHHHhHHHHHH Confidence 55555555555664 6899999999999999999887555 578887877777788888899999999999999987654 Q ss_pred hhcc-----hhhhhhhhhhHhhhhHHHHHHHHHHHHhCCCCCHHHHHHHhCCCCCCCcc--e-----------eeeccc- Q lcl|Aclame:pro 340 ELDK-----GFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEAGGD--R-----------LLVNGN- 400 (429) Q Consensus 340 ~~~~-----~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~Gl~~~~~gD--~-----------~~~~~n- 400 (429) .... .|.+.||.+.|. .+. .+.+.+..++..|.||-...|+.+|+...++=| . +..+-. T Consensus 389 L~~eGiDp~~Yvvw~DaS~Lt-~dP-d~~deA~~a~drGaIt~eAlRr~lG~~~dd~y~~~t~~~~q~~A~~~v~~~P~L 466 (629) T protein:vir:10 389 LRAEGIDPDRYVLWYDASGLT-VDP-DKTDEATAAKEQGAITHEAYRRYLGLADEDGYDLETLEGAQAWARDAIVADPSL 466 (629) T ss_pred HHHhCCCHHHhEeeecCcccc-cCC-CCcHHHHHHHHcCCccHHHHHHHhccccccCCCcCCcHHHHHHHHHHhcCCCch Confidence 4333 378899999873 222 334456778899999999999999997654311 1 110000 Q ss_pred ---cccc-----c-----ccccccCCCCCCCCCCCCCCCCCC Q lcl|Aclame:pro 401 ---MLPI-----D-----MAGQAYLKGGDTNGEVSKEGNEGN 429 (429) Q Consensus 401 ---~~~~-----~-----~~~~~~~~~g~~~~~~~~~~~~~n 429 (429) +.|+ . .+......+++.+++ +..+..++ T Consensus 467 i~~~apll~~~l~~i~~P~p~~a~~~~~~~~~~-~E~~~~~~ 507 (629) T protein:vir:10 467 IKVLAPLLTDELAEIDWPEPPAALPPGEDDQAD-EEQDTTGS 507 (629) T ss_pred hhhhhhhcCCccccccccCCCCcCCCCCcccCc-cccCCCCC Confidence 1111 1 011111122221111 11111111 No 141 >protein:vir:78161 Length: 355 # NCBI annotation: hypothetical protein # Family: family:all:2372 # MgeID: mge:1847 # MgeName: Min1 # Cross-refs: genbank:acc:YP_001294798;genbank:gi:149882819;genbank:GeneID:5309189 Probab=99.44 E-value=7.7e-13 Score=86.99 Aligned_cols=300 Identities=12% Similarity=-0.002 Sum_probs=169.0 Q ss_pred EEEEeeCC-CC--ceEEEEeeCCcceEE-EEcCCcceeeeeeEEEeec-ccCceEEEccceEEEeecCCCCCcccccCHH Q lcl|Aclame:pro 118 YANIEFDR-KG--KVQALWPIDASKVTV-YIDDVGLLNSKTKMWYVVN-TGGQQRVLKPEEILHFKNGITLDGLVGVPTM 192 (429) Q Consensus 118 ~~~~~~~~-~g--~~~~l~~l~p~~v~~-~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~evih~~~~~~~~~~~G~s~~ 192 (429) +.++++.. .| .+..|.+.|+.+++. ..+.+.. ........ .++....+++...|+.++.......+|.|.+ T Consensus 1 v~Eivw~~~~g~~~~~~l~~r~~~~~~~f~~~~~~~----l~~~~~~~~~g~~~~~lp~~kfi~~~~~~~~g~p~G~gLl 76 (355) T protein:vir:78 1 MFEQVYRIENGRARLGKLAWRPPRTISRFDVAPDGG----LVAIEQWGVFGKATVRIPVDRLVVFVNEREGANWLGQSLL 76 (355) T ss_pred CeEEEEEeeCCeEEEeeeeecCccceeeeeeccCCc----eeEEEecCCCCCCcceeccCCEEEEEeCCCCCCccchhhH Confidence 44555543 34 366788888876652 2222211 11112222 2234466888777777666666778999999 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHcc--CCcceEEEeCCCCCH-----------HHHHHHHHHHHHHhcccccccceeecCC Q lcl|Aclame:pro 193 EYLKSTLENSASADKFINNFYKQG--LQVKGLVQYVGDLNE-----------DAKKVFRENFESMSSGLQNSHRIALMPV 259 (429) Q Consensus 193 ~~~~~~i~~~~~~~~~~~~~~~ng--~~~~~~~~~~~~~~~-----------e~~~~~~~~~~~~~~g~~~~~~~~vl~~ 259 (429) ..+.-.........++...+.+.- +.|-+........+. ++.+.+.........|. + ..+|++. T Consensus 77 r~~~w~~~fK~~~~~~w~~f~Er~g~g~p~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~~~~~i~~g~-~--a~~iip~ 153 (355) T protein:vir:78 77 RQAYKNWLLKDRFLRIQALVGERNGLGVPIYQGAPLPEAIARDTARAEQWLNDQKEEGLQLAKEFRAGE-A--AGGYIPH 153 (355) T ss_pred HHHHHHHHHHHhhHHHHHHHHHHcCCCceEEEecCCCCcccchhhhHHHHHHHHHHHHHHHHHHhhCCc-c--eeEeecC Confidence 999999999999999999999987 444444443322221 12222333333322332 2 3578899 Q ss_pred CceeEecCCChhHHHHHHHHHHHHHHHHHHhcCChhhcCCccccccc-cHHHHHHHHHHHHHhHHHHHHHHHHHHhhccc Q lcl|Aclame:pro 260 GYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKATLN-NIEQQQQQFYTDTLQATLTMYEQEMTYKLFLD 338 (429) Q Consensus 260 g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~fgvp~~~l~~~~~~~~~-n~~~~~~~~~~~~l~P~~~~i~~~l~~~ll~~ 338 (429) |++++-+.......++.++.++.-++|+.++.- ..+-...+...++ ...+.........+.-.++.|++.||+.|+.. T Consensus 154 g~~ie~~ea~g~~~~~~~~i~~~d~~Isk~iLG-qtlTs~~~~~gGS~Alg~vh~~v~~~~~~aD~~~i~~~ln~~li~~ 232 (355) T protein:vir:78 154 GANFTLTGVQGKLPEMDGPIRYHDEQIARAVLA-HFLTLGGDKSTGSYALGDTFASFFTGSLNAVMKHIADVTQQHVVED 232 (355) T ss_pred CceEEEeecCCCcccHHHHHHHHHHHHHHHHhh-hhhccccCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Confidence 999888766656666888999999999998743 2322211111122 23444566777778888999999999876543 Q ss_pred hhh---cc-h--hhhhhhhhhHhhhhHHHHHHHHHHHHhCCCCCHH-----HHHHHhCCCCCCCcceeeeccc-cccccc Q lcl|Aclame:pro 339 SEL---DK-G--FYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPN-----EARSKEDLPPEAGGDRLLVNGN-MLPIDM 406 (429) Q Consensus 339 ~~~---~~-~--~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~N-----E~R~~~Gl~~~~~gD~~~~~~n-~~~~~~ 406 (429) --. .. . -++.|+ ... .+.+..++..++++..|++.++ .+|+.+|+|.-+.++....+.. ..+... T Consensus 233 l~~lN~~~~~~~P~~~~~--~~~-~~~~~~a~~~~~l~~~G~~~~~~~~~~~~~e~~gip~p~~~~~~~~~~~~~~~~~~ 309 (355) T protein:vir:78 233 LVDQNWGPEEPAPRLVPA--QLG-KEQPVTAEAIRALVECGAFTADPELEKDLRARYGLPAPAERDDGADAAAAKAAGRR 309 (355) T ss_pred HHHhcCCCCCCCCEEEec--CcC-hhHHHHHHHHHHHHhCCCccccHHHHHHHHHHhCCCCCCCCCcccCCccccccccc Confidence 211 01 1 134453 333 4556779999999999997764 4799999986544443332221 111111 Q ss_pred cccccCCCCCCCCCCCC--CCCCCC Q lcl|Aclame:pro 407 AGQAYLKGGDTNGEVSK--EGNEGN 429 (429) Q Consensus 407 ~~~~~~~~g~~~~~~~~--~~~~~n 429 (429) .. ....+.....+... .+.++. T Consensus 310 ~~-~~~~~~~~~~~~~a~~~~a~~~ 333 (355) T protein:vir:78 310 RA-KRLPGQRQGAALPSRSPRADPP 333 (355) T ss_pred cc-cccCCccccccccccCCCCCCh Confidence 00 11111101111111 111111 No 142 >protein:vir:78589 Length: 695 # NCBI annotation: NUDIX hydrolase # Family: family:all:297 # MgeID: mge:1854 # MgeName: BcepNY3 # Cross-refs: genbank:acc:YP_001294854;genbank:gi:149882917;genbank:GeneID:5291060 Probab=99.40 E-value=4e-13 Score=88.58 Aligned_cols=407 Identities=13% Similarity=0.115 Sum_probs=205.2 Q ss_pred CchhhhhhcccccccccccccCCchHHHHHhhcCCCCc--------c--eechhhhhccHHHHHHHHHHHHhhccCceEE Q lcl|Aclame:pro 1 MDSVKKFFNFEKRQTSQVIELNKDDEKLLEWLGISPST--------I--SVKGKNALKVATVFACIKILSESVSKLPLKI 70 (429) Q Consensus 1 Mg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~--~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~ 70 (429) -+-+.+.|. -.....+.........-++|-+..... + .-.-....+.|.+++|+..|++.+..- |.- T Consensus 66 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~F~Gy~~la~laQ~~eyr~~~~~ia~e~~R~-w~~ 142 (695) T protein:vir:78 66 SLRLARQFE--VDVSNYTPRERRAASYALDFNGTSMDALSFVTSSGFPGFPTLVLLAQLPEYRAMHEVLADECIRT-WGE 142 (695) T ss_pred ccccceece--eccccCCccccchhhhhhcccccccccchhhhccCcchHHHHHHHhhccchhhHHHHHHHHhhcc-cce Confidence 111222221 110000000000001111111111000 0 011123447788999999999877654 522 Q ss_pred EecC-Cc----------eeeeee-cchhhhhhcccCcCCCCHHHHHHHHHHHHHhhCCeEEEEeeCC------------- Q lcl|Aclame:pro 71 YQED-EY----------GIQRGT-KHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDR------------- 125 (429) Q Consensus 71 ~~~~-~~----------~~~~~~-~~~~~~~l~~~PN~~~s~~~~~~~~~~~~l~~G~~~~~~~~~~------------- 125 (429) .... ++ +..... +......|..+-..+.-+..|.+. +.+--++|-+.+++...+ T Consensus 143 ~~~~~~e~~~~~g~~~~~~~~~~~d~dqi~~L~~e~erL~V~~~l~ea-ik~aRlfGGa~~~i~i~gdd~~l~~PL~~~~ 221 (695) T protein:vir:78 143 AIGGTKEKADTSGLAAGGNAASTSDGDQLKQINDEIERLRIRDAVRTT-VIHDQAFGRAHPYFKIKGDDQIMDTPLVPRP 221 (695) T ss_pred eccccchhhhhhcccccccccccccHHHHHHHHHHHHHHHHHHHHHHH-HHhhccccceEEEEEeccCcccccccccccc Confidence 2111 00 000000 112233444333333333444444 444456666655443221 Q ss_pred ----CCceEEEEeeCCcceEEEEcC----CcceeeeeeEEEeecccCceEEEccceEEEeecC-C-----CCCcccccCH Q lcl|Aclame:pro 126 ----KGKVQALWPIDASKVTVYIDD----VGLLNSKTKMWYVVNTGGQQRVLKPEEILHFKNG-I-----TLDGLVGVPT 191 (429) Q Consensus 126 ----~g~~~~l~~l~p~~v~~~~~~----~~~~~~~~~~~~~~~~~g~~~~~~~~evih~~~~-~-----~~~~~~G~s~ 191 (429) .|..+.|.+++|.+|++.... -...++....|+.. |. .+-++.++.|... . +...+.|+|. T Consensus 222 ~~I~kGslKGl~ViDp~~vtP~~~n~~dP~spdfgkP~~y~V~---G~--kIH~SRL~~f~g~plPd~LKp~y~~~GiSv 296 (695) T protein:vir:78 222 YTVPKGSFQGLRVVEPYWVTPNNYNSINPVADDFYKPSTWWMI---GT--EVHATRLHTIVSRPVGDMLKPTYSFAGISM 296 (695) T ss_pred ccccCcceeeeEeecccccccchhhhccchhhccCCCceEEEe---ce--EEeeeeEEEecCCCchhhhhcccccCcccH Confidence 355667999999999885422 11123333333321 32 3444444444321 1 2234679999 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHccCCcceEEEeC--CCCCHHHHHHH--HHHHHHHhcccccccceeecC-CCceeEec Q lcl|Aclame:pro 192 MEYLKSTLENSASADKFINNFYKQGLQVKGLVQYV--GDLNEDAKKVF--RENFESMSSGLQNSHRIALMP-VGYQFQPI 266 (429) Q Consensus 192 ~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~--~~~~~e~~~~~--~~~~~~~~~g~~~~~~~~vl~-~g~~~~~~ 266 (429) .+.+...+..+.........+...-... ++ +.+ ..+.+....++ +-.+.++++ +| .++.+++ +.-+|++. T Consensus 297 ~q~~~e~V~~~~rT~~~v~~Li~~~~v~-~l-k~dla~~L~~g~~~~l~~R~eli~~~R--sn-~G~~llDk~~Eefeq~ 371 (695) T protein:vir:78 297 TQLAMPYIDNWLRTRQSVSDIVKQFSVS-GI-LMDLAQALMPGANVDLSMRAELINRYR--DN-RNILFLDKATEEFFQF 371 (695) T ss_pred HHHHHHHHHHHHHHHhHHHHHHHhhhhH-HH-HHHHHHhhcChhHHHHHHHHHHHHHhc--Cc-cceEEEecCCcceEEE Confidence 9999999999888888888877653222 22 111 12222222223 334445554 23 3466667 57899998 Q ss_pred CCChhHHHHHHHHHHHHHHHHHHhcCChhhcCCcccccc-cc-------HHHHHHHHHHHHHhHHHHHHHHHHHHhhccc Q lcl|Aclame:pro 267 SLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKATL-NN-------IEQQQQQFYTDTLQATLTMYEQEMTYKLFLD 338 (429) Q Consensus 267 ~~~~~d~~~~e~~~~~~~~Ia~~fgvp~~~l~~~~~~~~-~n-------~~~~~~~~~~~~l~P~~~~i~~~l~~~ll~~ 338 (429) +.+...++ +........||.+-+||...|-+.++.-. ++ +-+...+.-+.-|.|.++.+-+.|-+..|.. T Consensus 372 stslSGLd--dVi~qf~q~VAgaa~IPltkLfGqSPkGlNATGE~D~rnYYD~I~s~Qe~~L~p~L~rl~~ii~rS~~G~ 449 (695) T protein:vir:78 372 NTPLSGLD--ALQAQAQEQMSAVSHIPLIKLLGITPTGLNASSEGEIRVWYDYVRAYQRNALQQLMNDVIVMIQLSLFGA 449 (695) T ss_pred ecccCCHH--HHHHHHHHHHHhhhcCchhhhhccCCccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC Confidence 87777665 66788889999999999988765544322 22 3333344445678898888888887766654 Q ss_pred hhhcchhhhhhhhhhHhhhhHHHHHHH-------HHHHHhCCCCCHHHHHHHhCCCCCC-------Ccceeeecccc-cc Q lcl|Aclame:pro 339 SELDKGFYSKFNVDAILRADIKTRYEA-------YRTGIQGGFLKPNEARSKEDLPPEA-------GGDRLLVNGNM-LP 403 (429) Q Consensus 339 ~~~~~~~~~~fd~~~l~~~d~~~~~~~-------~~~~~~~g~~t~NE~R~~~Gl~~~~-------~gD~~~~~~n~-~~ 403 (429) .. . .+.|.+..|.+++.++++++ ...++..|+++++|+|.++.-+|.- -.|.+-+|... .+ T Consensus 450 id--p--di~~~fnPL~qmtd~EkAeI~~k~A~~d~~~~~~gvI~~~evr~rL~~d~~s~Y~~~~D~~d~p~~~~~~~~~ 525 (695) T protein:vir:78 450 VD--P--SIKWQWNALRELDDLEVAESRYKQAQSDVLYVQEQVIRPDQVAARLNTEPDGPYAGKLDANDDPGVPADDDID 525 (695) T ss_pred CC--C--cceEEeCCCCCcCHHHHHHHHhhhhHHHHHHHHhcCCCHHHHHHHHhcCCCcccccccccccCCCcCccchhh Confidence 32 2 45666677888887777665 4567789999999999998877531 12332222211 00 Q ss_pred ccc-cccccCCCCCCCCCCCCCCCCCC Q lcl|Aclame:pro 404 IDM-AGQAYLKGGDTNGEVSKEGNEGN 429 (429) Q Consensus 404 ~~~-~~~~~~~~g~~~~~~~~~~~~~n 429 (429) ... ..+....+++..+ +.....|+ T Consensus 526 ~~~~~~~~~~~~~~~~~--~~~~~~g~ 550 (695) T protein:vir:78 526 GVLTYVQRLAEGGDTGA--PGGARAGA 550 (695) T ss_pred hhHhhhcCcccccccCC--CCCCCCCC Confidence 000 0011112222211 11223333 No 143 >protein:vir:101541 Length: 694 # NCBI annotation: gp17 # Family: family:all:297 # MgeID: mge:1477 # MgeName: Bcep43 # Cross-refs: genbank:acc:NP_958122;genbank:gi:41057668;genbank:GeneID:2716798 Probab=99.39 E-value=6.2e-13 Score=87.50 Aligned_cols=407 Identities=14% Similarity=0.119 Sum_probs=204.1 Q ss_pred CchhhhhhcccccccccccccCCchHHHHHhhcCCCC--------cc--eechhhhhccHHHHHHHHHHHHhhccCceEE Q lcl|Aclame:pro 1 MDSVKKFFNFEKRQTSQVIELNKDDEKLLEWLGISPS--------TI--SVKGKNALKVATVFACIKILSESVSKLPLKI 70 (429) Q Consensus 1 Mg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~--~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~ 70 (429) -.-+.+.|-..-..- .+.. ......-++|-|.... ++ .-.-....+.|.+++|+..|++.+..- |.- T Consensus 65 ~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~F~Gy~~la~laQ~~eyr~~~~~ia~e~~R~-w~~ 141 (694) T protein:vir:10 65 SLRLARQFEVDVSNY-TPRE-RRAASYALDFNGTSMDALSFVTSSGFPGFPTLVLLAQLPEYRAMHEVLADECIRT-WGE 141 (694) T ss_pred chhhhhhccccccCC-Cccc-cchhhhhhccCcccccchhhhhccCcchHHHHHHHhhccchhhHHHHHHHHhhcc-cce Confidence 111222221000000 0000 0000111111111000 00 011123447888999999999877654 522 Q ss_pred EecC-Cc----------eeeeee-cchhhhhhcccCcCCCCHHHHHHHHHHHHHhhCCeEEEEeeCC------------- Q lcl|Aclame:pro 71 YQED-EY----------GIQRGT-KHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDR------------- 125 (429) Q Consensus 71 ~~~~-~~----------~~~~~~-~~~~~~~l~~~PN~~~s~~~~~~~~~~~~l~~G~~~~~~~~~~------------- 125 (429) .... ++ +..... +......|..+-..+.-+..|.+. +.+--++|-+.+++...+ T Consensus 142 ~~~~~~e~~~~~g~~~~~~~~~~~d~dqi~~L~~e~erl~V~~~l~ea-ik~aRlfGGa~~~i~I~gdd~~l~~PL~~~~ 220 (694) T protein:vir:10 142 AIGGTKEKADTSGLAAGGNAASTSDGDQLKQINDEIERLRIRDAVRTT-VIHDQAFGRAHPYFKIKGDDQIMDTPLVPRP 220 (694) T ss_pred eccccchhhhhhcccccccccccccHHHHHHHHHHHHHHHHHHHHHHH-HHhhccccceEEEEEeecCcccccccccccc Confidence 2111 00 000000 112233444333333333344444 444456666655443211 Q ss_pred ----CCceEEEEeeCCcceEEEEcC----CcceeeeeeEEEeecccCceEEEccceEEEeecC-C-----CCCcccccCH Q lcl|Aclame:pro 126 ----KGKVQALWPIDASKVTVYIDD----VGLLNSKTKMWYVVNTGGQQRVLKPEEILHFKNG-I-----TLDGLVGVPT 191 (429) Q Consensus 126 ----~g~~~~l~~l~p~~v~~~~~~----~~~~~~~~~~~~~~~~~g~~~~~~~~evih~~~~-~-----~~~~~~G~s~ 191 (429) .|..+.|.+++|.+|++.... -...++....|+.. |. .+-++.++.|... . +...+.|+|. T Consensus 221 ~~I~kGslKGl~ViDp~~vtP~~~n~~dP~spdfgkP~~y~V~---G~--~IH~SRL~~f~g~plPd~LKp~y~~~G~Sv 295 (694) T protein:vir:10 221 YTVPKGSFQGLRVVEPYWVTPNNYNSINPVADDFYKPSTWWMI---GT--EVHATRLHTIVSRPVGDMLKPTYSFAGISM 295 (694) T ss_pred ccccCcceeeeEeecccccccchhhhccchhhccCCCceEEEe---ce--EEeeeeEEEecCCCchhhhhcccccCcccH Confidence 355667999999999885422 11123333333321 32 3444444444321 1 2234679999 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHccCCcceEEEeC--CCCCHHHHHHH--HHHHHHHhcccccccceeecC-CCceeEec Q lcl|Aclame:pro 192 MEYLKSTLENSASADKFINNFYKQGLQVKGLVQYV--GDLNEDAKKVF--RENFESMSSGLQNSHRIALMP-VGYQFQPI 266 (429) Q Consensus 192 ~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~--~~~~~e~~~~~--~~~~~~~~~g~~~~~~~~vl~-~g~~~~~~ 266 (429) .+.+...+..+.........+...-... ++ +.+ ..+.+....++ +-.+.++++ +| .++.+++ +.-+|++. T Consensus 296 ~q~~~e~V~~~~rT~~~v~~Li~~~~v~-~l-k~dla~~L~~g~~~~l~~R~eli~~~R--sn-~G~~llDk~~Eefeq~ 370 (694) T protein:vir:10 296 TQLAMPYIDNWLRTRQSVSDIVKQFSVS-GI-LMDLAQALMPGANVDLSMRAELINRYR--DN-RNILFLDKATEEFFQF 370 (694) T ss_pred HHHHHHHHHHHHHHHhHHHHHHHhhhhH-HH-HHHHHHhhcChhHHHHHHHHHHHHHhc--Cc-cceEEEecCCcceEEE Confidence 9999999999888888888777653222 22 111 11222222223 334445554 23 3466667 57899998 Q ss_pred CCChhHHHHHHHHHHHHHHHHHHhcCChhhcCCcccccc-cc-------HHHHHHHHHHHHHhHHHHHHHHHHHHhhccc Q lcl|Aclame:pro 267 SLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKATL-NN-------IEQQQQQFYTDTLQATLTMYEQEMTYKLFLD 338 (429) Q Consensus 267 ~~~~~d~~~~e~~~~~~~~Ia~~fgvp~~~l~~~~~~~~-~n-------~~~~~~~~~~~~l~P~~~~i~~~l~~~ll~~ 338 (429) +.+...++ +........||.+-+||...|-+.+..-. ++ +-+...+.-+.-|.|.++.+-+.|-+..|.. T Consensus 371 stslSGLd--dVi~qf~q~VAgaa~IPltkLfGqSPkGlNATGE~D~rnYYD~I~s~Qe~~L~p~L~rl~~ii~rS~~G~ 448 (694) T protein:vir:10 371 NTPLSGLD--ALQAQAQEQMSAVSHIPLIKLLGITPTGLNASSEGEIRVWYDYVRAYQRNALQQLMNDVIVMIQLSLFGA 448 (694) T ss_pred ecccCCHH--HHHHHHHHHHHhhhcCchhhhhccCcccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC Confidence 87777665 66788889999999999988765544322 22 3333344445678898888888887766654 Q ss_pred hhhcchhhhhhhhhhHhhhhHHHHHHH-------HHHHHhCCCCCHHHHHHHhCCCCCC-------Ccceeeecccc-cc Q lcl|Aclame:pro 339 SELDKGFYSKFNVDAILRADIKTRYEA-------YRTGIQGGFLKPNEARSKEDLPPEA-------GGDRLLVNGNM-LP 403 (429) Q Consensus 339 ~~~~~~~~~~fd~~~l~~~d~~~~~~~-------~~~~~~~g~~t~NE~R~~~Gl~~~~-------~gD~~~~~~n~-~~ 403 (429) .. . .+.|.+..|.+++.++++++ ...++..|+++++|+|.++.-+|.- -.|.+-+|... .+ T Consensus 449 id--p--~i~~~fnPL~qmtd~EkAeI~~k~A~~d~~~~~~gvI~~~evr~rL~~d~~s~Y~~~~D~~d~p~~~~~~~~~ 524 (694) T protein:vir:10 449 VD--P--SIKWQWNALRELDDLEVAESRYKQAQSDVLYVQEQVIRPDQVAARLNTEPDGPYAGKLDANDDPGVPADDDID 524 (694) T ss_pred CC--C--cceEEeCCCCCcCHHHHHHHHhhhhHHHHHHHHhcCCCHHHHHHHHhcCCCcccccccccccCCCcCccchhh Confidence 32 2 45566677878777777665 4567789999999999998877531 12322222211 00 Q ss_pred ccc-cccccCCCCCCCCCCCCCCCCCC Q lcl|Aclame:pro 404 IDM-AGQAYLKGGDTNGEVSKEGNEGN 429 (429) Q Consensus 404 ~~~-~~~~~~~~g~~~~~~~~~~~~~n 429 (429) ... ..+....+++..+ +..+.+|. T Consensus 525 ~~~~~~~~~~~~~~~~~--~~~~~~g~ 549 (694) T protein:vir:10 525 GVLTYVQRLAEGGDTGA--PGGARAGA 549 (694) T ss_pred hhHhhhcCcccccccCC--CCcccccc Confidence 000 0001111111111 11122222 No 144 >protein:vir:3648 Length: 695 # NCBI annotation: gp17 # Family: family:all:297 # MgeID: mge:75 # MgeName: Bcep781 # Cross-refs: genbank:acc:NP_705643;genbank:gi:23752328;genbank:GeneID:955749 Probab=99.37 E-value=7.5e-13 Score=87.05 Aligned_cols=407 Identities=13% Similarity=0.114 Sum_probs=203.0 Q ss_pred CchhhhhhcccccccccccccCCchHHHHHhhcCCCCc--------c--eechhhhhccHHHHHHHHHHHHhhccCceEE Q lcl|Aclame:pro 1 MDSVKKFFNFEKRQTSQVIELNKDDEKLLEWLGISPST--------I--SVKGKNALKVATVFACIKILSESVSKLPLKI 70 (429) Q Consensus 1 Mg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~--~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~ 70 (429) -+-+.+.|. -.....+.........-++|-+..... + .-.-....+.|.+++|+..|++.+..- |.- T Consensus 66 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~F~Gy~~la~laQ~~eyr~~~~~ia~e~~R~-w~~ 142 (695) T protein:vir:36 66 SLRLARQFE--VDVSNYTPRERRAASYALDFNGTSMDALSFVTSSGFPGFPTLVLLAQLPEYRAMHEVLADECIRT-WGE 142 (695) T ss_pred ccccceece--ecccccCccccchhhhhhcccccccccchhhhccCcchHHHHHHHhhccchhhHHHHHHHHhhcc-cce Confidence 111222221 110000000000001111111111000 0 011123447788999999999877654 522 Q ss_pred EecC-Cc----------eeeee-ecchhhhhhcccCcCCCCHHHHHHHHHHHHHhhCCeEEEEeeCC------------- Q lcl|Aclame:pro 71 YQED-EY----------GIQRG-TKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDR------------- 125 (429) Q Consensus 71 ~~~~-~~----------~~~~~-~~~~~~~~l~~~PN~~~s~~~~~~~~~~~~l~~G~~~~~~~~~~------------- 125 (429) .... ++ +.... .+......|...-..+.-+..+. ..+.+--++|-+.+++...+ T Consensus 143 ~~~~~~e~~~~~g~~~~~~~~~~~d~dqik~L~~e~erL~V~~~l~-eaik~aRlfGGa~~~i~i~gdd~~l~~PL~~~~ 221 (695) T protein:vir:36 143 AIGGTKEKADTSGLAAGGNAASTSDGDQLKQINDEIERLRIRDAVR-TTVIHDQAFGRAHPYFKIKGDDQIMDTPLVPRP 221 (695) T ss_pred ecccchhhhhhccccccccccccCchHHHHHHHHHHHHHHHHHHHH-HHHHhhccccceEEEEEeccCcccccccccccc Confidence 2111 00 00000 01122333433333333333333 34444456666665543222 Q ss_pred ----CCceEEEEeeCCcceEEEEcC----CcceeeeeeEEEeecccCceEEEccceEEEeecC-C-----CCCcccccCH Q lcl|Aclame:pro 126 ----KGKVQALWPIDASKVTVYIDD----VGLLNSKTKMWYVVNTGGQQRVLKPEEILHFKNG-I-----TLDGLVGVPT 191 (429) Q Consensus 126 ----~g~~~~l~~l~p~~v~~~~~~----~~~~~~~~~~~~~~~~~g~~~~~~~~evih~~~~-~-----~~~~~~G~s~ 191 (429) .|..+.|.+++|.+|++.... -...++....|+.. |. .+-++.++.|... . +...+.|+|. T Consensus 222 ~~I~kGslKGl~ViDp~~vtP~~~n~~dP~spdfgkP~~y~V~---G~--kIH~SRL~~f~g~plPd~LKp~y~~~GiSv 296 (695) T protein:vir:36 222 YTVPKGSFQGLRVVEPYWVTPNNYNSINPVADDFYKPSTWWMI---GT--EVHATRLHTIVSRPVGDMLKPTYSFAGISM 296 (695) T ss_pred ccccCcceeeeEeecccccccchhhhccchhhccCCCceEEEe---ce--EEeeeeEEEecCCCchhhhhcccccCcccH Confidence 355667999999999885422 11123333333321 32 3444444444321 1 2234679999 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHccCCcceEEEeC--CCCCHHHHHHH--HHHHHHHhcccccccceeecC-CCceeEec Q lcl|Aclame:pro 192 MEYLKSTLENSASADKFINNFYKQGLQVKGLVQYV--GDLNEDAKKVF--RENFESMSSGLQNSHRIALMP-VGYQFQPI 266 (429) Q Consensus 192 ~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~--~~~~~e~~~~~--~~~~~~~~~g~~~~~~~~vl~-~g~~~~~~ 266 (429) .+.+...+..+.........+...-... ++ +.+ ..+.+....++ +-.+.++++ +| .++.+++ +.-+|++. T Consensus 297 ~q~~~e~V~~~~rT~~~v~~Li~~~~v~-~l-k~dla~aL~~g~~~~l~~R~eli~~~R--sn-~G~~llDk~~Eefeq~ 371 (695) T protein:vir:36 297 TQLAMPYIDNWLRTRQSVSDIVKQFSVS-GI-LMDLAQALMPGANVDLSMRAELINRYR--DN-RNILFLDKATEEFFQF 371 (695) T ss_pred HHHHHHHHHHHHHHHhHHHHHHHhhhHH-HH-HHHHHHhhcChhHHHHHHHHHHHHHhc--Cc-cceEEEecCCcceEEE Confidence 9999999998888888888777553222 22 111 11222222222 334445554 23 3466667 57899998 Q ss_pred CCChhHHHHHHHHHHHHHHHHHHhcCChhhcCCcccccc-cc-------HHHHHHHHHHHHHhHHHHHHHHHHHHhhccc Q lcl|Aclame:pro 267 SLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKATL-NN-------IEQQQQQFYTDTLQATLTMYEQEMTYKLFLD 338 (429) Q Consensus 267 ~~~~~d~~~~e~~~~~~~~Ia~~fgvp~~~l~~~~~~~~-~n-------~~~~~~~~~~~~l~P~~~~i~~~l~~~ll~~ 338 (429) +.+...++ +........||.+-+||...|-+.++.-. ++ +-+...+.-+.-|.|.++.+-+.|-+..|.. T Consensus 372 stslSGLd--dVi~qf~q~VAgaa~IPltkLfGqSPkGlNATGE~D~rnYYD~I~s~Qe~~L~p~L~rl~~ii~rS~~G~ 449 (695) T protein:vir:36 372 NTPLSGLD--ALQAQAQEQMSAVSHIPLIKLLGITPTGLNASSEGEIRVWYDYVRAYQRNALQQLMNDVIVMIQLSLFGA 449 (695) T ss_pred ecccCCHH--HHHHHHHHHHHhhhcCchhhhhccCcccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC Confidence 87777665 66788889999999999988765544322 22 3333344445678898888888887766654 Q ss_pred hhhcchhhhhhhhhhHhhhhHHHHHHH-------HHHHHhCCCCCHHHHHHHhCCCCCC-------Ccceeeecccc-cc Q lcl|Aclame:pro 339 SELDKGFYSKFNVDAILRADIKTRYEA-------YRTGIQGGFLKPNEARSKEDLPPEA-------GGDRLLVNGNM-LP 403 (429) Q Consensus 339 ~~~~~~~~~~fd~~~l~~~d~~~~~~~-------~~~~~~~g~~t~NE~R~~~Gl~~~~-------~gD~~~~~~n~-~~ 403 (429) .. . .+.|.+..|.+++.++++++ ...++..|+++++|+|.++.-+|.- -.|.+-+|... .+ T Consensus 450 id--p--di~~~fnPL~qmtd~EkAeI~~k~A~~d~~~~~~gvI~~~evr~rL~~d~~s~Y~~~~D~~d~p~~~~~~~~~ 525 (695) T protein:vir:36 450 VD--P--SIKWQWNALRELDDLEVAESRYKQAQSDVLYVQEQVIRPDQVAARLNTEPDGPYAGKLDANDDPGVPADDDID 525 (695) T ss_pred CC--C--cceEEeCCCCCcCHHHHHHHHhhhhHHHHHHHHhcCCCHHHHHHHHhcCCCcccccccccccCCCcCccchhh Confidence 32 2 45566677888887777665 4567789999999999998877531 12222222211 00 Q ss_pred ccc-cccccCCCCCCCCCCCCCCCCCC Q lcl|Aclame:pro 404 IDM-AGQAYLKGGDTNGEVSKEGNEGN 429 (429) Q Consensus 404 ~~~-~~~~~~~~g~~~~~~~~~~~~~n 429 (429) ... ..+....+++..+ +..+.+|. T Consensus 526 ~~~~~~~~~~~~~~~~~--~~~~~~g~ 550 (695) T protein:vir:36 526 GVLTYVQRLAEGGDTGA--PGGARAGA 550 (695) T ss_pred hhHhhhcCcccccccCC--CCcccccc Confidence 000 0001111111111 11122222 No 145 >protein:vir:106716 Length: 698 # NCBI annotation: gp18 # Family: family:all:297 # MgeID: mge:1599 # MgeName: Bcep1 # Cross-refs: genbank:acc:NP_944326;genbank:gi:38638625;genbank:GeneID:2657345 Probab=99.37 E-value=4.1e-13 Score=88.47 Aligned_cols=411 Identities=12% Similarity=0.090 Sum_probs=206.4 Q ss_pred CchhhhhhcccccccccccccCCchHHHHHhhcCCCCc--------c--eechhhhhccHHHHHHHHHHHHhhccCceEE Q lcl|Aclame:pro 1 MDSVKKFFNFEKRQTSQVIELNKDDEKLLEWLGISPST--------I--SVKGKNALKVATVFACIKILSESVSKLPLKI 70 (429) Q Consensus 1 Mg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~--~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~ 70 (429) -+-+.+.|. -.....+.........-++|-+..... + .-.-....+.|.+++|+..|++.+..- |.- T Consensus 66 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~F~Gy~~la~laQ~~eyr~~~~~ia~e~~R~-w~~ 142 (698) T protein:vir:10 66 SLRLARQFE--VDVSNYTPRERRAASYALDFNGTSMDALSFVTSSGFPGFPTLVLLAQLPEYRAMHEVLADECIRT-WGE 142 (698) T ss_pred cccccccce--eccccCCccccchhhhhhcccccccccchhhhccCcchHHHHHHHhhccchhhHHHHHHHHhhcc-cce Confidence 111222221 110000000000001111111111000 0 011123447788999999999877654 522 Q ss_pred EecC-Cc----------eeeeee-cchhhhhhcccCcCCCCHHHHHHHHHHHHHhhCCeEEEEeeC-------------- Q lcl|Aclame:pro 71 YQED-EY----------GIQRGT-KHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFD-------------- 124 (429) Q Consensus 71 ~~~~-~~----------~~~~~~-~~~~~~~l~~~PN~~~s~~~~~~~~~~~~l~~G~~~~~~~~~-------------- 124 (429) .... ++ +..... +......|..+-..+.-+..+.+.+.+. -++|-+.+++... T Consensus 143 ~~~~~~e~~~~~g~~~~~~~~~~~d~dqi~~L~~e~erl~V~~~l~eai~~a-RlfGGa~~~i~I~gdd~~l~~PL~~~~ 221 (698) T protein:vir:10 143 AIGGTKEKADTSGLAAGGNAASTSDGDQLKQINDEIERLRIRDAVRTTVIHD-QAFGRAHPYFKIKGDDQIMDTPLVPRP 221 (698) T ss_pred eccccchhhhhhcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHhc-ccccceEEEEEeecCcccccccccccc Confidence 2111 00 000000 1122334443333333344444444444 5566665444321 Q ss_pred ---CCCceEEEEeeCCcceEEEEcC----CcceeeeeeEEEeecccCceEEEccceEEEeecC-C-----CCCcccccCH Q lcl|Aclame:pro 125 ---RKGKVQALWPIDASKVTVYIDD----VGLLNSKTKMWYVVNTGGQQRVLKPEEILHFKNG-I-----TLDGLVGVPT 191 (429) Q Consensus 125 ---~~g~~~~l~~l~p~~v~~~~~~----~~~~~~~~~~~~~~~~~g~~~~~~~~evih~~~~-~-----~~~~~~G~s~ 191 (429) ..|..+.|.+++|.+|++.... -...++....|+. .|. .+-++.++.|... . +...+.|.|. T Consensus 222 ~~I~kGslKGL~ViDp~~vtP~~~n~~dP~spdfgkP~~y~V---~G~--~IH~SRL~~~vg~pvpd~LKp~y~f~G~Sv 296 (698) T protein:vir:10 222 YTVPKGSFQGLRVVEPYWVTPNNYNSINPVADDFYKPSTWWM---IGS--EVHATRLHTIVSRPVGDMLKPTYSFAGISM 296 (698) T ss_pred ccccCccceeeeeecccccccchhhhccchhhccCCCceEEE---ecc--eecceeEEEecCCCchhhhcchhccCCccH Confidence 1355667999999999875422 1112333333322 232 3445555444321 1 2234579999 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHccCCcceEEEeCCCCCHHHHHHHH--HHHHHHhcccccccceeecC-CCceeEecCC Q lcl|Aclame:pro 192 MEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGDLNEDAKKVFR--ENFESMSSGLQNSHRIALMP-VGYQFQPISL 268 (429) Q Consensus 192 ~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~~e~~~~~~--~~~~~~~~g~~~~~~~~vl~-~g~~~~~~~~ 268 (429) ++.+...+..+.........+...-.........-..+++....++. -.+-++++ +| .++.+++ ++-+|++.+. T Consensus 297 ~q~~~e~V~~~~rT~~~v~~Li~~~~~~~l~~dla~aL~~g~~~~l~~R~eli~~~R--sn-~G~~llDk~~Eefeq~st 373 (698) T protein:vir:10 297 TQLAMPYIDNWLRTRQSVSDIVKQFSVSGILMDLAQALTPGANVDLSMRAELINRYR--DN-RNILFLDKATEEFFQFNT 373 (698) T ss_pred HHHHHHHHHHHHHHhhhHHHHHHHhhHHHHHHHHHHhcCChhhHHHHHHHHHHHHhc--Cc-cceEEEecCCcceEEEec Confidence 99999999998888888777775533222211111112222222233 34445554 24 3456667 5789999887 Q ss_pred ChhHHHHHHHHHHHHHHHHHHhcCChhhcCCcccccc-ccHH-------HHHHHHHHHHHhHHHHHHHHHHHHhhccchh Q lcl|Aclame:pro 269 NMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKATL-NNIE-------QQQQQFYTDTLQATLTMYEQEMTYKLFLDSE 340 (429) Q Consensus 269 ~~~d~~~~e~~~~~~~~Ia~~fgvp~~~l~~~~~~~~-~n~~-------~~~~~~~~~~l~P~~~~i~~~l~~~ll~~~~ 340 (429) +...++ +........||.+-+||...|-+.+..-. ++-+ +...+.-+.-|.|.++.+-+.|-+..|... T Consensus 374 ~lSGLd--dVi~qf~q~VAgaa~IPltkLfGqSPkGlNATGE~D~rnYYD~I~s~Qe~~L~p~L~rl~~ii~rS~~G~i- 450 (698) T protein:vir:10 374 PLSGLD--ALQAQAQEQMSAVSHIPLIKLLGITPTGLNASSEGEIRVWYDYVRAYQRNALQQLMNDVIVMIQLSLFGAV- 450 (698) T ss_pred CcCCHH--HHHHHHHHHHHhhhcCchhhhhccCCcccCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC- Confidence 777665 66788889999999999988765544322 2233 333444455788988888888877666543 Q ss_pred hcchhhhhhhhhhHhhhhHHHHHHH-------HHHHHhCCCCCHHHHHHHhCCCCCC-------Ccceeeecc-cccccc Q lcl|Aclame:pro 341 LDKGFYSKFNVDAILRADIKTRYEA-------YRTGIQGGFLKPNEARSKEDLPPEA-------GGDRLLVNG-NMLPID 405 (429) Q Consensus 341 ~~~~~~~~fd~~~l~~~d~~~~~~~-------~~~~~~~g~~t~NE~R~~~Gl~~~~-------~gD~~~~~~-n~~~~~ 405 (429) .. .|.|.+..|.+++.++++++ ...++..|+++++|+|.++.-+|.- --|++..|. +..+.. T Consensus 451 -dp--~i~~~fnPL~qmtd~EkAeI~~k~A~~d~~~~~~gvI~~~evr~rL~~d~~s~Y~~~~d~~d~p~~~~~~~~~~~ 527 (698) T protein:vir:10 451 -DP--SIKWQWNALRELDDLEVAEARYKQAQSDVLYVQEQVIRPDQVAARLNTEPDGPYAGKLDANDDPGAPADDDIDGV 527 (698) T ss_pred -CC--cceEEeCCCCCcCHHHHHHHHhhhhHHHHHHHHhcCCCHHHHHHHHhccCCCccccccCCcccCCCCCCCcchHH Confidence 22 45666677888887777765 4566788999999999998765421 112332332 211111 Q ss_pred ccc--cccCCCCCCCCCCCCCCCCCC Q lcl|Aclame:pro 406 MAG--QAYLKGGDTNGEVSKEGNEGN 429 (429) Q Consensus 406 ~~~--~~~~~~g~~~~~~~~~~~~~n 429 (429) ... .....|+....+.+.-+-+|+ T Consensus 528 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 553 (698) T protein:vir:10 528 LTYVQRMAEGGDTGAPTAPGGARAGA 553 (698) T ss_pred HhhhcCCcCCCCcccccccccccCCC Confidence 110 111112222223333333344 No 146 >protein:vir:105782 Length: 449 # NCBI annotation: gp5 # Family: family:all:6783 # MgeID: mge:1501 # MgeName: ES18 # Cross-refs: genbank:acc:YP_224143;genbank:gi:62362218;genbank:GeneID:3342535 Probab=99.36 E-value=4.1e-12 Score=83.00 Aligned_cols=374 Identities=11% Similarity=0.139 Sum_probs=175.2 Q ss_pred CchhhhhhcccccccccccccCCchHHHHHhhcCCCCcceech---hhhh-ccHHHHHHHHHHHHhhccCceEEEecCCc Q lcl|Aclame:pro 1 MDSVKKFFNFEKRQTSQVIELNKDDEKLLEWLGISPSTISVKG---KNAL-KVATVFACIKILSESVSKLPLKIYQEDEY 76 (429) Q Consensus 1 Mg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~a~-~~~~v~~~i~~ia~~ia~~~~~~~~~~~~ 76 (429) ||+.+-..+.-.+. +....-+|. ...++. ..+| .++.+..+|+.++..+-.--..+....+. T Consensus 23 d~l~~~~~glg~~r-----------~~~~~~~g~---~~~~~~~~l~~~Yr~~~ia~~iVd~~~d~~~~~~~~i~~g~~~ 88 (449) T protein:vir:10 23 MGLMVPTMGLDNKR-----------HSAWCEYGF---PELVTYENLYSLYRRGGIAHGAVEKLVGKCWQTNPEIIEGDDA 88 (449) T ss_pred HHHHHHHhcCCccc-----------chhhhhcCC---cccCCHHHHHHHHhcCchhHHHHHhhhhhhhhcCcccccCccc Confidence 22222111110000 001111111 112232 2234 36778899999997652221122222211 Q ss_pred eeeeeecchhhhhhcccCcCCCCHHHHHHHH---HHHHHhhCCeEEEEee-CC---------CCceEEEEeeCCcceEEE Q lcl|Aclame:pro 77 GIQRGTKHYLNNLLRLRPNPYMSSMNFFGSL---EAQKNLYGNSYANIEF-DR---------KGKVQALWPIDASKVTVY 143 (429) Q Consensus 77 ~~~~~~~~~~~~~l~~~PN~~~s~~~~~~~~---~~~~l~~G~~~~~~~~-~~---------~g~~~~l~~l~p~~v~~~ 143 (429) ... .....+...+. +-+ ...+|..+ ...-.++|-+++++.. +. .+....|.|+....+++. T Consensus 89 ~~~-~~~~~~e~~~~-~l~----~~~~~~~l~ea~~~~rl~Gga~i~i~v~d~~~l~~Pl~~~~~i~~i~v~~~~~i~~~ 162 (449) T protein:vir:10 89 DDS-EDETSWEKKSK-QVF----TNRLWRSFAEADRRRLVGRYAGILLHIRDEKDWNLPATKGRGLQKVSVSWAGSLKVA 162 (449) T ss_pred cch-hhhHHHHHHHH-HHH----HHHHHHHHHHHHHhhhccCcEEEEEEecCCCCCCcccccCcceeeEEeeccccCChh Confidence 110 00001111111 000 02333332 2223567777776643 22 124555666655444432 Q ss_pred ---EcCCcceeeeeeEEEeec--c--cCceEEEccceEEEeecCCCCCcccccCHHHHHHHHHHHHHHHH-HHHHHHHHc Q lcl|Aclame:pro 144 ---IDDVGLLNSKTKMWYVVN--T--GGQQRVLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASAD-KFINNFYKQ 215 (429) Q Consensus 144 ---~~~~~~~~~~~~~~~~~~--~--~g~~~~~~~~evih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~-~~~~~~~~n 215 (429) .+.....++....|.... . .+..+.+-++.|+||.. .+..|.|.++.+...+.....+. -+...++++ T Consensus 163 ~~~~dp~sp~yg~P~~y~v~~~~~g~~~~~~~iH~SRl~~~~~----~~~~g~~~L~~~yn~l~~~~~~~~~~a~~~l~~ 238 (449) T protein:vir:10 163 EWDTGINSKTYGQPKLWKYTERLPNGSSRRVDIHPDRVFILGD----YSEDAIGFLEPAYNAFVSLEKVEGGSGESFLKN 238 (449) T ss_pred hhhcCCCCCCCCCceEEEEeeeccCCCccceeeccceeEeecC----CCCCChhHHHHHHHHhhhHHHhhhhHHHHHHHH Confidence 111122233333332221 1 12334577788888742 22347888888766543332221 122222222 Q ss_pred cCC-----------cceEEEeCCCCCHHHHHHHHHHHHHHhcccccccceeecCCCceeEecCCChhHHHHHHHHHHHHH Q lcl|Aclame:pro 216 GLQ-----------VKGLVQYVGDLNEDAKKVFRENFESMSSGLQNSHRIALMPVGYQFQPISLNMSDAQFLENTELTIR 284 (429) Q Consensus 216 g~~-----------~~~~~~~~~~~~~e~~~~~~~~~~~~~~g~~~~~~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~ 284 (429) ..+ ..+..........+..+++........+|. + .+.+..+-+|+.++.++.+.. +....... T Consensus 239 ~~rq~~~~~~~~~~~~~l~~~~~~~~e~~~~~~~~~~~~~~~~~---~-~~~i~~~~d~~~~~~~~sgl~--d~l~~~~q 312 (449) T protein:vir:10 239 AARQLNVNFEKEIDFTNLASLYGVSIDELQDKFNEVAGEINRGN---D-VLMTTQGATVTPLVTSVADPT--ATYNVNLQ 312 (449) T ss_pred HHHHHhhhhhhhhhhhhhhHHhhCCchHHHHHHHHHHHHHhccc---h-heeecCCcceEEEecccCChh--HHHHHHHH Confidence 111 111111112223333444444444433332 2 345567778998888887664 66777888 Q ss_pred HHHHHhcCChhhcCCccccccccHHHHHHHHH------HHHHhHHHHHHHHHHHHhhccchhhcchhhhhhhhhhHhhhh Q lcl|Aclame:pro 285 QIATAFGIKMHQLNDLSKATLNNIEQQQQQFY------TDTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAILRAD 358 (429) Q Consensus 285 ~Ia~~fgvp~~~l~~~~~~~~~n~~~~~~~~~------~~~l~P~~~~i~~~l~~~ll~~~~~~~~~~~~fd~~~l~~~d 358 (429) +||.+-|||...|-+.+.+-.++.++ .+.|+ +.-|.|.++.+-+.|-+.-+.... .. +.|.+..|..++ T Consensus 313 ~iaaa~~IP~t~L~Gqsp~glnst~D-~~nyyd~i~~~Q~~l~p~le~l~~~l~~s~~g~~~--~d--~~i~f~pL~~~t 387 (449) T protein:vir:10 313 TAAAGVDIPTRILIGNQQAERSSTED-QKYFNARCQSRRVDLSFEIEDFCDKLIELKIIDAV--AK--KAVIWDDLNEQT 387 (449) T ss_pred HHHHHhCCCeeeeeccCccccccchh-HHHHHHHHHHHHHhhhHHHHHHHHHHHHhhcCCCC--Cc--eeEEeCCCCCCC Confidence 99999999999887655543333232 23333 234678887777777554443331 23 455557888888 Q ss_pred HHHHHHH-------HHHHHhCC---CCCHHHHHHHhCCCCCCCcceeeeccccccccccccccCCCCCCCCCCCCCCCCC Q lcl|Aclame:pro 359 IKTRYEA-------YRTGIQGG---FLKPNEARSKEDLPPEAGGDRLLVNGNMLPIDMAGQAYLKGGDTNGEVSKEGNEG 428 (429) Q Consensus 359 ~~~~~~~-------~~~~~~~g---~~t~NE~R~~~Gl~~~~~gD~~~~~~n~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 428 (429) .+++++. +++++++| +++.+|+|+.+|++|..+ + +++ +++.++.+++.+. T Consensus 388 ~kEkAei~k~~A~a~~~~~~ag~~~~~~~~EiR~~~~~~~~~~-~---------~~~----------~e~~de~~~~~d~ 447 (449) T protein:vir:10 388 GTEKLTNAKTMGEINQTMLGSGDNPAFSREEIRTAAGYDNDDE-E---------PLG----------EEDGDEEDKATDS 447 (449) T ss_pred HHHHHHHHHHHHHHHHHHHHccccCCcCHHHHHHHhcccCCCC-C---------CCC----------CCCCccccccCCc Confidence 8887654 45666666 899999999999988532 1 010 0000001111111 Q ss_pred C Q lcl|Aclame:pro 429 N 429 (429) Q Consensus 429 n 429 (429) . T Consensus 448 ~ 448 (449) T protein:vir:10 448 A 448 (449) T ss_pred C Confidence 1 No 147 >protein:vir:98444 Length: 434 # NCBI annotation: hypothetical protein # Family: family:all:5096 # MgeID: mge:1589 # MgeName: VWB # Cross-refs: genbank:acc:NP_958276;genbank:gi:41057250;genbank:GeneID:2732828 Probab=99.12 E-value=1.4e-10 Score=74.67 Aligned_cols=365 Identities=8% Similarity=-0.087 Sum_probs=176.2 Q ss_pred cceechhhhh-------ccHHHHHHHHHHHHhhccCceEEEecCCceeeeeecchhhhhhcccCcCCCCHHHHHHHHHHH Q lcl|Aclame:pro 38 TISVKGKNAL-------KVATVFACIKILSESVSKLPLKIYQEDEYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQ 110 (429) Q Consensus 38 ~~~~~~~~a~-------~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~~~~~~~~~~~~~l~~~PN~~~s~~~~~~~~~~~ 110 (429) +++-.....+ ......-+|+.+++.+---.|.+ .+. .....+..++. + | ........+..+ T Consensus 1 ~l~~~~~~~~~~~~~~~v~n~~~~ivd~~~~~l~~~gf~~---~d~----~~~~~~~~i~~-~-N---~~d~~~~~~~~~ 68 (434) T protein:vir:98 1 MLPKNAEQAFLDFQRKARTNFCGLIANASVHRLLALGVTG---PDG----EPDTRASRWWQ-A-N---RLDSRQKLVWRM 68 (434) T ss_pred CCCCCccHHHHHhhhhhhccchHHHHHHHHhhhccCceec---CCC----chHHHHHHHHH-h-c---ChhHHHHHHHHH Confidence 1111111111 12234456666666543333332 111 11122333342 2 2 334566678899 Q ss_pred HHhhCCeEEEEeeCCCCce------EEEEeeCCcceEEEEcCCcceeeeeeEEEeecccCce------------------ Q lcl|Aclame:pro 111 KNLYGNSYANIEFDRKGKV------QALWPIDASKVTVYIDDVGLLNSKTKMWYVVNTGGQQ------------------ 166 (429) Q Consensus 111 ~l~~G~~~~~~~~~~~g~~------~~l~~l~p~~v~~~~~~~~~~~~~~~~~~~~~~~g~~------------------ 166 (429) ++.+|.+|+++.++..+.. ..+.+++|..+.+.++...........++....++.. T Consensus 69 a~i~G~ay~~v~~~~~~~~~~~~~~~~I~~~~p~~~~~i~D~~~~~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (434) T protein:vir:98 69 AMAQSAGYMLVGAHPTRTEDNGRPSPLITMEHPSECIVEYDPETGEPLVGLKVWHNDIDGFGYARVFFDDTSFPYRTRER 148 (434) T ss_pred HhhcCceEEEEecCCCcccccCCceeEEEEeccceeEEEEeCCCCceEEEEEEEEeccCCceEEEEEEeCcEEEEEEeec Confidence 9999999999987655432 2367789998888776432111111111111111110 Q ss_pred -----------------------EEEccceEEEeecCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHHccCCcceEE Q lcl|Aclame:pro 167 -----------------------RVLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLV 223 (429) Q Consensus 167 -----------------------~~~~~~evih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~ 223 (429) ..|..-.|+||.+... ....|.|-++.....++......-......+-.+.|.-++ T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~h~~g~vPvv~f~N~~~-~~~~g~sd~e~vi~liDa~~~~~s~~~~~~~~~a~p~~~i 227 (434) T protein:vir:98 149 TGARLPWGPDSWVYTGTADSGDVHDLGGMQLVEFARMPD-LGEDPEPEFAGVLDIQDRVNLGILNRMAASRFSGFRQKWI 227 (434) T ss_pred cccccccccccceecccccccccCCCCccceEEeccCCC-cCcCCcchhhhHHHHHHHHHHHHHHHHHHHHHhcchhhhh Confidence 0011223667764433 3336899888888888888777777666666666665555 Q ss_pred Ee-CCCCCHHHHHHHHHHHHHHhcccccccceeecC-CCceeEecCCChhHHHHHHHHHHHHHHHHHHhcCChhhcCCcc Q lcl|Aclame:pro 224 QY-VGDLNEDAKKVFRENFESMSSGLQNSHRIALMP-VGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLS 301 (429) Q Consensus 224 ~~-~~~~~~e~~~~~~~~~~~~~~g~~~~~~~~vl~-~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~fgvp~~~l~~~~ 301 (429) .- ......+........++ .... ..+.++.++ ++.++.++..+..+. +++.++..+.+++..=++|+..+++.. T Consensus 228 ~G~~~~~~~~~~~~~~~~~~-~~~~--~~~~i~~~~~~~~~~~q~~~~~~~~-~~~~l~~~i~~~~~~~~~p~~~~~~~~ 303 (434) T protein:vir:98 228 KGHKFAKRTDPATGMTVVDQ-PFVP--SPSAVWASEGENTQFGQLDATDLSG-FLKEHASDVRDMLTISQTPTYLYATDL 303 (434) T ss_pred cCCCcccccccccccchhhh-hhhc--cccccccCCCCCceEEEecCcchHH-HHHHHHHHHHHHhcccCCCHHHhcccc Confidence 42 11111011111111111 1111 123456665 467887776543333 778889999999999999999997531 Q ss_pred ccccccHHHHHHHHHHHHHhHHHHHHHHHHHHhh----------ccchhhcchhhhhhhhhhHhhhhHHHHHHHHHHHHh Q lcl|Aclame:pro 302 KATLNNIEQQQQQFYTDTLQATLTMYEQEMTYKL----------FLDSELDKGFYSKFNVDAILRADIKTRYEAYRTGIQ 371 (429) Q Consensus 302 ~~~~~n~~~~~~~~~~~~l~P~~~~i~~~l~~~l----------l~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~ 371 (429) + |.......+....+.-.+...+..|...| ....... ..+++.+......+..+.++++.++.. T Consensus 304 -~---n~Sg~Al~~~~~~l~~k~~~k~~~f~~~l~~~~rl~~~~~g~~~~~--~~~~v~w~~~~~~s~~~~ada~~kl~~ 377 (434) T protein:vir:98 304 -V---NISADTIGALDILHVAKVREHIASFSEGLESVLALAAAQAGVPEDY--TEAEVRWANPAHVTMAVKADAATKLKS 377 (434) T ss_pred -C---ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhh--eeeeEEecCCCCCCHHHHHHHHHHHHh Confidence 1 11111112222222222222222222111 1111111 123333345567888999999999998 Q ss_pred CCCCCHHHHHHHhCCCCCCC---cceeeeccccccccccccccCCCCCCCCCCCCCCCCC Q lcl|Aclame:pro 372 GGFLKPNEARSKEDLPPEAG---GDRLLVNGNMLPIDMAGQAYLKGGDTNGEVSKEGNEG 428 (429) Q Consensus 372 ~g~~t~NE~R~~~Gl~~~~~---gD~~~~~~n~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 428 (429) .|+ +..-+++++|+++.+- .++-...............++.+|+..+ +..+++| T Consensus 378 ~g~-~~e~~~~~lg~~~~e~~r~~~e~~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~dg 434 (434) T protein:vir:98 378 IGY-PLDVIAEELDESPARVRRIVAGAASQALLAASLLPAPGAPSAGNVPD--SGGAVDG 434 (434) T ss_pred cCC-cHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCc--ccCCCCC Confidence 886 7777888999876321 0100000000000001111122222222 2333344 No 148 >protein:vir:98883 Length: 517 # NCBI annotation: portal # Family: family:all:898 # MgeID: mge:1568 # MgeName: BCJA1c # Cross-refs: genbank:acc:YP_164413;genbank:gi:56694903;genbank:GeneID:3197273 Probab=99.02 E-value=9.2e-10 Score=70.13 Aligned_cols=406 Identities=11% Similarity=0.058 Sum_probs=180.6 Q ss_pred Cchhhhhhccccccccc-----------ccccCCch---HHH---HHhhcCCCCccee-ch------hhhhccHHHHHHH Q lcl|Aclame:pro 1 MDSVKKFFNFEKRQTSQ-----------VIELNKDD---EKL---LEWLGISPSTISV-KG------KNALKVATVFACI 56 (429) Q Consensus 1 Mg~~~~~~~~~~~~~~~-----------~~~~~~~~---~~~---~~~~~~~~~~~~~-~~------~~a~~~~~v~~~i 56 (429) |++|+++.+++++-... ......+. ..+ ..|.......+.. +. ...+....-..+. T Consensus 1 m~~~~~ik~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~I~~w~~~Y~g~~~~~~~~~~~~~~~~~~~~sl~~~~~i~ 80 (517) T protein:vir:98 1 MKVIQRIKNFFKRGGYALSGQTLKSINDHEKINIDPNELARIERNLRQYEGDYPQVEYINSQGKIQERDYMTLNLRKLSA 80 (517) T ss_pred CchHHHHHHHHHHHHHHhcccchhHhhcCCceecCHHHHHHHHHHHHHhcCCCcccccccccccccccceeecCcHHHHH Confidence 99999999887652110 01122221 122 2233222222110 00 0011112223333 Q ss_pred HHHHHhhccCceEEEecCCceeee--eecchhhhhhcccCcCCCCHHHHHHHHHHHHHhhCCeEEEEeeCCCCceEEEEe Q lcl|Aclame:pro 57 KILSESVSKLPLKIYQEDEYGIQR--GTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWP 134 (429) Q Consensus 57 ~~ia~~ia~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~PN~~~s~~~~~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~ 134 (429) +.+|+-+..=+..+.-.+.+.... .........|+ +--.........+..+.+.+..|.+++.+..+..+ ..+.. T Consensus 81 ~~~A~Ll~~e~~~i~v~d~~~~~~~~~~~~~~~e~l~-~i~~~n~f~~~~~~~~e~a~a~G~~a~k~~~d~~~--~~I~~ 157 (517) T protein:vir:98 81 DVLSGLVFNEQCEVYVSDAKDEEKKDNSFKTAHEFIQ-HVFQHNKFIKNLSDYLEPTFALGGLTVRPYVDNGE--IEFSW 157 (517) T ss_pred HHhhhhhcCCcceEEecccccccccccchhHHHHHHH-HHHHhccHHHHHHHHHHHHhhhCCEEEEEEEeCCe--eEEEE Confidence 444444433222222222111100 00011122222 11112234555566777778889999988776432 23555 Q ss_pred eCCcceEEEEc-CCcce-----------------eeee-----------------eEEEeeccc-----CceEE------ Q lcl|Aclame:pro 135 IDASKVTVYID-DVGLL-----------------NSKT-----------------KMWYVVNTG-----GQQRV------ 168 (429) Q Consensus 135 l~p~~v~~~~~-~~~~~-----------------~~~~-----------------~~~~~~~~~-----g~~~~------ 168 (429) ++++.|-+... ..+.. .+.. +....+..+ |..+. T Consensus 158 v~ad~~~Pl~~~~~~v~~~ai~~~~~~~~~~~~~~Yt~lE~H~~~~~~~~~~~y~I~n~ly~s~~~~~lG~~v~L~~~~e 237 (517) T protein:vir:98 158 ALANAFYPLRSNSNGISEGVMKSVTTKVIGNKTVYYTLLEFHEWEKTEEGESLYVITNELYKSDNEGEIGKRIPLEELYE 237 (517) T ss_pred EcCCeeEEEEecCCCeEEEEEEEEEEEeecCCceEEEEEEEEecCceeccCCcEEEEEEEEecCCCcccccccccccccc Confidence 66665544211 11110 0000 000000100 11111 Q ss_pred -------Ecc---ceEEEeecCCCC----CcccccCHHHHHHHHHHHHHHHHHHHHHHHHccCCcceEEE-----eCCCC Q lcl|Aclame:pro 169 -------LKP---EEILHFKNGITL----DGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQ-----YVGDL 229 (429) Q Consensus 169 -------~~~---~evih~~~~~~~----~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~-----~~~~~ 229 (429) ++. --+.||+.+-+. ....|.|.+..+...++..+........-++.|-+ ..++. ...+. T Consensus 238 ~l~~~~~~~g~~~Plf~y~~~p~~N~~~~~splG~S~~~~a~~~~d~lD~~~s~~~~e~~~g~~-~i~vp~~~l~~~~~~ 316 (517) T protein:vir:98 238 GMQEKTYIQGLSRPLFNYLKPSGFNNINPHSPLGLGITDNSVSTLKKINDTYDQFWWEIKMGQR-TVFVSDVMLRTVPDE 316 (517) T ss_pred CCCcceeECCCCcceEEEecCCcccccccCCCCCCchhhhhHHHHHHHHHHHHHHHHHHHhCCc-ceecChhhhccccCC Confidence 110 013356543322 34579999999988888777777766666676544 32221 11110 Q ss_pred C-HHH---HHHHHHHHHHHhcccccccceeecCCCceeEecCCChhHHHHHHHHHHHHHHHHHHhcCChhhcCCcccccc Q lcl|Aclame:pro 230 N-EDA---KKVFRENFESMSSGLQNSHRIALMPVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKATL 305 (429) Q Consensus 230 ~-~e~---~~~~~~~~~~~~~g~~~~~~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~fgvp~~~l~~~~~~~~ 305 (429) . ... .+.-. ..|.+.. .-.++-.++.++....+-++.+..+...+.|+...|+++..++....+. T Consensus 317 ~g~~~~~~~d~~~----~~y~~~~------~~~~~~~i~~~~~~iR~e~~~~~~~~~L~~i~~~~Gls~~t~~~~~~~~- 385 (517) T protein:vir:98 317 SGMPPPQVFDPDV----NVYKSIR------MGTDEEFVKDVTHDIRTEQYKEAINQALRTLEMELKLSVGTFSFDGRSM- 385 (517) T ss_pred CCcccCCCCCccc----ceeeecc------CCCCCCceeeeccccchHHHHHHHHHHHHHHHHHhCCCccccccccccc- Confidence 0 000 00000 1111100 0012334666676777778999999999999999999999998655433 Q ss_pred ccHHHHH--HHHHHHHHhHHHHHHHHHHHHh-----------hccchhhcchhhhhhhhhhHhhhhHHHHHHHHHHHHhC Q lcl|Aclame:pro 306 NNIEQQQ--QQFYTDTLQATLTMYEQEMTYK-----------LFLDSELDKGFYSKFNVDAILRADIKTRYEAYRTGIQG 372 (429) Q Consensus 306 ~n~~~~~--~~~~~~~l~P~~~~i~~~l~~~-----------ll~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~ 372 (429) .|+.+.. +.-.-.++.-+.+.++.+|..- -+........+.+.+++++-...|.++.++...+++.+ T Consensus 386 kTATEi~s~~~~~~~t~~~~~~~~~~aL~~lv~~i~~l~~~~~~~~~~~~~~~~v~v~f~D~i~~D~~~~~~~~~~~v~a 465 (517) T protein:vir:98 386 KTATEIVSENDLTYRTRNDHVYEVEQFIKGLVISVLELAKTYKLFGGEIPSAEHIGVDFDDGVFQDRSALLRFYGQAKTF 465 (517) T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCcceEEEcCCCCCCCHHHHHHHHHHHHhc Confidence 2333221 1111122222333333222221 11222223344566777777889999999999999999 Q ss_pred CCCCHHHHHHH-hCCCCCCCcceee--eccccccccccccccCCCCCCCCCCC Q lcl|Aclame:pro 373 GFLKPNEARSK-EDLPPEAGGDRLL--VNGNMLPIDMAGQAYLKGGDTNGEVS 422 (429) Q Consensus 373 g~~t~NE~R~~-~Gl~~~~~gD~~~--~~~n~~~~~~~~~~~~~~g~~~~~~~ 422 (429) |+|++-+++.+ .|+..-+ .++-+ +..-....+..+..+...+...++++ T Consensus 466 G~ms~~~~i~~~~g~~eee-A~~e~~~i~~E~~~~~~~~~~~~~~~~~~gd~e 517 (517) T protein:vir:98 466 GFIPTVEAIQRIFKVPKKT-AEQWLEEIRKDQIELDPVTISQRAQKRMFGDEE 517 (517) T ss_pred CCCCHHHHHHHhCCCChHH-HHHHHHHHHHhccccCCCCccccccCCCCCCCC Confidence 99999998655 4875421 11110 00000001100001111111111111 No 149 >protein:vir:5961 Length: 503 # NCBI annotation: hypothetical protein # Family: family:all:125 # MgeID: mge:125 # MgeName: SPP1 # Cross-refs: genbank:acc:NP_690661;genbank:geneid:6329220;genbank:gi:22855055;interpro:IPR006428;uniprot:P54309;genbank:GeneID:955279 Probab=99.01 E-value=5.5e-09 Score=65.85 Aligned_cols=400 Identities=11% Similarity=0.050 Sum_probs=178.9 Q ss_pred Cchhhhhhcccccccccccc--------c-CCchHHHHHhhcCCCCc------------ceec----hhhhhccHHHHHH Q lcl|Aclame:pro 1 MDSVKKFFNFEKRQTSQVIE--------L-NKDDEKLLEWLGISPST------------ISVK----GKNALKVATVFAC 55 (429) Q Consensus 1 Mg~~~~~~~~~~~~~~~~~~--------~-~~~~~~~~~~~~~~~~~------------~~~~----~~~a~~~~~v~~~ 55 (429) |.+...+............. . ......+.+........ .... +..=+.++....+ T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~YY~g~~~i~~~~~~~~~~~~~~~~~~~~~~~ri~~n~~~~i 92 (503) T protein:vir:59 13 EELNEIIVESAKEIAEPDTTMIQKLIDEHNPEPLLKGVRYYMCENDIEKKRRTYYDAAGQQLVDDTKTNNRTSHAWHKLF 92 (503) T ss_pred HhHHHhhhhhhhhccchhHHHHHHHHHhhcHHHHHHHHHHhccccchhhccchhcccccccccccccccceeecchHHHH Confidence 22221111100000000000 0 00000011111000000 0000 0000124556778 Q ss_pred HHHHHHhhccCceEEEecCCceeeeeecchhhhhhcccCcCCCCHHHHHHHHHHHHHhhCCeEEEEeeCCCCceEEEEee Q lcl|Aclame:pro 56 IKILSESVSKLPLKIYQEDEYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPI 135 (429) Q Consensus 56 i~~ia~~ia~~~~~~~~~~~~~~~~~~~~~~~~~l~~~PN~~~s~~~~~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~l 135 (429) ++..+..+-.-|+.+...++. . ......+.. | ........++.+.+.+|.+|+++..+.+|++ .+..+ T Consensus 93 vd~~~~yl~g~~~~~~~~d~~-----~-~~~l~~~~~--n---~~~~~~~~~~~~~~~~G~~~~~v~~d~dg~~-~i~~~ 160 (503) T protein:vir:59 93 VDQKTQYLVGEPVTFTSDNKT-----L-LEYVNELAD--D---DFDDILNETVKNMSNKGIEYWHPFVDEEGEF-DYVIF 160 (503) T ss_pred HHHHHhhhhcCCeeeccCcHH-----H-HHHHHHHHh--c---CHHHHHHHHHHHHhhCCeEEEEEeecCCCce-EEEEE Confidence 888888888888776432221 1 112222321 2 4556667788899999999999999888875 58889 Q ss_pred CCcceEEEEcCCccee-eeeeEEEe-ecccCce----EEEccceEEEeecC-------------------------CC-- Q lcl|Aclame:pro 136 DASKVTVYIDDVGLLN-SKTKMWYV-VNTGGQQ----RVLKPEEILHFKNG-------------------------IT-- 182 (429) Q Consensus 136 ~p~~v~~~~~~~~~~~-~~~~~~~~-~~~~g~~----~~~~~~evih~~~~-------------------------~~-- 182 (429) +|..+.+.+++..... .....+|. ....+.. ..+++..+.++... ++ T Consensus 161 ~p~~~~~i~d~~~~~~~~~~ir~~~~~~~~~~~~~~~evy~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (503) T protein:vir:59 161 PAEEMIVVYKDNTRRDILFALRYYSYKGIMGEETQKAELYTDTHVYYYEKIDGVYQMDYSYGENNPRPHMTKGGQAIGWG 240 (503) T ss_pred ccceeEEEEeCCCCCceEEEEEEEEEecCCCceEEEEEEEeCCcEEEEEEcCCcccccccccccccccceeecceeccCC Confidence 9999888776532111 11111111 1111111 12333333332210 00 Q ss_pred -------CCcccccCHHHHHHHHHHHHHHHHHHHHHHHHccCCcceEEEeCCCCCHHHHHHHHHHHHHHhccccccccee Q lcl|Aclame:pro 183 -------LDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGDLNEDAKKVFRENFESMSSGLQNSHRIA 255 (429) Q Consensus 183 -------~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~g~~~~~~~~ 255 (429) .+...|.|-+..+...++....+.......++..+.|-.+++--.....+ .....+. ..+++ T Consensus 241 ~vPiv~~~nn~~~~sd~~~~~~liDa~d~~~s~~~~~~~~~~~~~~v~~g~~~~~~~---~~~~~~~--------~~~~~ 309 (503) T protein:vir:59 241 RVPIIPFKNNEEMVSDLKFYKDLIDNYDSITSSTMDSFSDFQQIVYVLKNYDGENPK---EFTANLR--------YHSVI 309 (503) T ss_pred ccceEEecCCCCCCcchhhhHHHHHHHHHHHHHHHHHHHHhcCCeeEeecCCccccc---hhhhhhh--------cccce Confidence 12345888888888888877777666666677777776665532222211 1111111 12345 Q ss_pred ecCCCceeEecCCChhHHHHHHHHHHHHHHHHHHhcCC---hhhcCCccccccccH----------HHHHHHHHHHHHhH Q lcl|Aclame:pro 256 LMPVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIK---MHQLNDLSKATLNNI----------EQQQQQFYTDTLQA 322 (429) Q Consensus 256 vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~fgvp---~~~l~~~~~~~~~n~----------~~~~~~~~~~~l~P 322 (429) .++++.+...+........+....+.....|...-++| +..+++ ..++... .+.....+...|.- T Consensus 310 ~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~i~~~s~~p~~~~~~~~~--~~Sg~Ai~~~~~~l~~k~~~~~~~~~~~l~~ 387 (503) T protein:vir:59 310 KVSGDGGVDTLRAEIPVDSAAKELERIQDELYKSAQAVDNSPETIGG--GATGPALENLYALLDLKANMAERKIRAGLRL 387 (503) T ss_pred eccCCCcceeEeccCCHHHHHHHHHHHHHHHHHHhcccCCCcccccc--cccHHHHHHHHHHHHHHHHHHHHHHHHHHHH Confidence 55554444333333233334455555555555555554 333322 1122111 12233444555555 Q ss_pred HHHHHHHHHHHhhccchhhcchhhhhhhhhhHhhhhHHHHHHHHHHHHhCCCCCHHHHHHHhCCCCCCC--cceeeeccc Q lcl|Aclame:pro 323 TLTMYEQEMTYKLFLDSELDKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEAG--GDRLLVNGN 400 (429) Q Consensus 323 ~~~~i~~~l~~~ll~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~Gl~~~~~--gD~~~~~~n 400 (429) +++.|...+...-......... +.+.+..-+..|..+.++.+.+++.+|+++...+.++++.-+.+. ......-.. T Consensus 388 ~~~~i~~~~~~~~~~~~~~~~~--i~i~f~~~~p~d~~~~~~~~~kl~~~GiiS~et~l~~l~~v~d~~~E~~ri~~E~~ 465 (503) T protein:vir:59 388 FFWFFAEYLRNTGKGDFNPDKE--LTMTFTRTRIQNDSEIVQSLVQGVTGGIMSKETAVARNPFVQDPEEELARIEEEMN 465 (503) T ss_pred HHHHHHHHHHhccCcccccccc--eeEEeCCCCCCCHHHHHHHHHHHHhCCCCchHHHHHhCCCCCCHHHHHHHHHHHHH Confidence 5555555444321111111122 344445567889999999999999999999999999887644321 111100000 Q ss_pred -ccc-ccccccccCCCCCCC---CCCCCCCCCCC Q lcl|Aclame:pro 401 -MLP-IDMAGQAYLKGGDTN---GEVSKEGNEGN 429 (429) Q Consensus 401 -~~~-~~~~~~~~~~~g~~~---~~~~~~~~~~n 429 (429) ... ..... ...++..+ +++...+++.| T Consensus 466 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 497 (503) T protein:vir:59 466 QYAEMQGNLL--DDEGGDDDLEEDDPNAGAAESG 497 (503) T ss_pred HHHhhhcccc--CccCCCCCCCcCCCCCCcccCC Confidence 000 00000 00111111 11111111111 No 150 >protein:vir:2427 Length: 485 # NCBI annotation: gp14 # Family: family:all:524 # MgeID: mge:52 # MgeName: D29 # Cross-refs: genbank:acc:NP_046829;genbank:gi:9630397;genbank:GeneID:1261620 Probab=98.97 E-value=6.4e-09 Score=65.51 Aligned_cols=393 Identities=11% Similarity=0.012 Sum_probs=173.5 Q ss_pred Cch-------------hhhhhcccccccccccccCCchHHHHHhhcCCCC----cceech---hhhhccHHHHHHHHHHH Q lcl|Aclame:pro 1 MDS-------------VKKFFNFEKRQTSQVIELNKDDEKLLEWLGISPS----TISVKG---KNALKVATVFACIKILS 60 (429) Q Consensus 1 Mg~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~---~~a~~~~~v~~~i~~ia 60 (429) +|+ ++.+-....+- ..+-++.-.... ...+.. .....+....-+|+..+ T Consensus 6 ~~~~~~~~~~~~~~~L~~~~~~~~~r~-----------~~~~~YY~G~~~i~~~~~~~~~~~~~~~~~~n~~~~ivd~~~ 74 (485) T protein:vir:24 6 PGQEEIADPAIARDEMVSAFEDQNQNL-----------RSNTSYYEAERRPEAIGVTVPVQMQSLLAHVGYPRLYVDSIA 74 (485) T ss_pred CCCCcccchHHHHHHHHHHHHHHHHHH-----------HHHHHHHhccCchhhcCcccchhhhhhhhccchHHHHHHHHh Confidence 111 11110000000 000000000000 000000 00011233445566666 Q ss_pred HhhccCceEEEecCCceeeeeecchhhhhhcccCcCCCCHHHHHHHHHHHHHhhCCeEEEEeeCCCCce-------EEEE Q lcl|Aclame:pro 61 ESVSKLPLKIYQEDEYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKV-------QALW 133 (429) Q Consensus 61 ~~ia~~~~~~~~~~~~~~~~~~~~~~~~~l~~~PN~~~s~~~~~~~~~~~~l~~G~~~~~~~~~~~g~~-------~~l~ 133 (429) +.+---+|.+- ++. .....+..++.. | ........+..+++.+|.||+++.++..+.. ..+. T Consensus 75 ~~l~~~g~~~~---~~~---~~~~~l~~i~~~--N---~~d~~~~~~~~~a~i~G~ay~~v~~~~~~~~~~~~~~~~~i~ 143 (485) T protein:vir:24 75 ERQAVEGFRLG---DAD---EADEELWQWWQA--N---NLDIEAPLGYTDAYVHGRSYITISRPDPQIDLGWDPNVPLIR 143 (485) T ss_pred hhhccCceecC---CCc---hhHHHHHHHHHh--c---ChhHHHHHHHHHHhhcCceEEEEecCCcccccccCCCcceEE Confidence 55544444432 111 111223444432 2 3456778899999999999999988765432 2577 Q ss_pred eeCCcceEEEEcCCcceeeeeeE---------------------EEeecccCceE-------EEccceEEEeecCCCCCc Q lcl|Aclame:pro 134 PIDASKVTVYIDDVGLLNSKTKM---------------------WYVVNTGGQQR-------VLKPEEILHFKNGITLDG 185 (429) Q Consensus 134 ~l~p~~v~~~~~~~~~~~~~~~~---------------------~~~~~~~g~~~-------~~~~~evih~~~~~~~~~ 185 (429) +++|..+.++++........... +++...+|... .+..-.|+||++...... T Consensus 144 ~~~p~~~~~i~D~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~h~~g~vPvv~f~n~~~~~~ 223 (485) T protein:vir:24 144 VEPPTRMYAEIDPRIGRPAKAIRVAYDAEGNEIQAATLYTPNETFGWFRAEGEWVEWFSDPHGLGAVPVVPLPNRTRLSD 223 (485) T ss_pred EeccceeEEEeeCCcCceeEEEEEEEeecCCeEEEEEEEcCCcEEEEEecCCceEeecccccCCCcccEEEeccCcccCC Confidence 88888888777643211110000 11111111110 011223677775555566 Q ss_pred ccccCHHHH-HHHHHHHHHHHHHHHHHHHHccCCcceEEEeCCCCCHHHHH----HHHHHHHHHhcccccccceeecC-C Q lcl|Aclame:pro 186 LVGVPTMEY-LKSTLENSASADKFINNFYKQGLQVKGLVQYVGDLNEDAKK----VFRENFESMSSGLQNSHRIALMP-V 259 (429) Q Consensus 186 ~~G~s~~~~-~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~~e~~~----~~~~~~~~~~~g~~~~~~~~vl~-~ 259 (429) .+|.|-+.. +...++.............+..+.|..++.- .+.++.. .-...|.. ..+.++.++ + T Consensus 224 ~~G~s~i~~~v~~liDa~~~~~s~~~~~~~~~a~p~~~i~G---~~~~~~~~~~~~~~~~~~~------~~~~i~~~~~~ 294 (485) T protein:vir:24 224 LYGTSEITPELRSMTDAAARILMLMQATAELMGVPQRLIFG---IKPEEIGVDPETGQTLFDA------YLARILAFEDA 294 (485) T ss_pred cCCcccchhhHHHHHHHHHHHHHHHHHHHHhhcchhhhhcc---CCccccccccccccchhhh------cccceeccCCC Confidence 788887653 3444454444444444444444555444431 1111111 00111111 223455654 5 Q ss_pred CceeEecCCChhHHHHHHHHHHHHHHHHHHhcCChhhcCCccccc--cccHH----------HHHHHHHHHHHhHHHHHH Q lcl|Aclame:pro 260 GYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKAT--LNNIE----------QQQQQFYTDTLQATLTMY 327 (429) Q Consensus 260 g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~fgvp~~~l~~~~~~~--~~n~~----------~~~~~~~~~~l~P~~~~i 327 (429) +.++.++..+..+ .+++.++..+.+++..=++|+..+++...++ +.... +.....+...+.-+++.+ T Consensus 295 ~~~~~q~~~~~~e-~~~~~l~~~i~~~s~~~~~p~~~fg~~~~n~~Sg~Al~~~~~~l~~ka~~~~~~f~~~l~~~~~l~ 373 (485) T protein:vir:24 295 EGKIQQFSAAELA-NFTNALDQIAKQVAAYTGLPPQYLSTAADNPASAEAIRAAESRLIKKVERKNAIFGGAWEEAMRLA 373 (485) T ss_pred CceEEeecccchH-HHHHHHHHHHHHHhcccCCCHHHhccccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Confidence 7788777655434 3778888889999999999999987543211 11111 111222222333333333 Q ss_pred HHHHHHhhccchhhcchhhhhhhhhhHhhhhHHHHHHHHHHHHhCC--CCCHHHHHHHhCCCCCC--Ccceee-----ec Q lcl|Aclame:pro 328 EQEMTYKLFLDSELDKGFYSKFNVDAILRADIKTRYEAYRTGIQGG--FLKPNEARSKEDLPPEA--GGDRLL-----VN 398 (429) Q Consensus 328 ~~~l~~~ll~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g--~~t~NE~R~~~Gl~~~~--~gD~~~-----~~ 398 (429) ..-.+.. .......++.+.| ..-...+..+.++.+.+++.+| +++..-+++++|+.+.+ ...... .+ T Consensus 374 ~~~~~~~--~~~~d~~~i~v~f--~~~~~~s~~~~ad~~~kl~~~g~~~~s~et~~~~l~~~~d~~~e~~~~~ee~~~~~ 449 (485) T protein:vir:24 374 YRLMKGG--DVPPDMLRMETVW--RDPSTPTYAAKADAATKLYGNGQGVIPRERARKDMGYSIAEREEMRRWDEEEAAMG 449 (485) T ss_pred HHHhcCC--CCccccceeeEEe--cCCCCCCHHHHHHHHHHHHhcccccCCHHHHHhhCCCCHhHHHHHHHHHHHHhhhh Confidence 2211100 0000112223333 3345678888888899988865 77887788999986543 111110 00 Q ss_pred ccc-cc---ccccccccCCCCCCCCCCCCCCCCCC Q lcl|Aclame:pro 399 GNM-LP---IDMAGQAYLKGGDTNGEVSKEGNEGN 429 (429) Q Consensus 399 ~n~-~~---~~~~~~~~~~~g~~~~~~~~~~~~~n 429 (429) ... .. ..........+++..++.+.+.+.++ T Consensus 450 ~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~ 484 (485) T protein:vir:24 450 LGLLGTMVDADPTVPGSPNPTPAPKPQPAIEGGDS 484 (485) T ss_pred hhHHHhhcccCCCCCCCCCCCCCCCCccCCCCCCC Confidence 000 00 01111111122223333333333333 No 151 >protein:vir:79703 Length: 505 # NCBI annotation: minor structural protein gp61 # Family: family:all:898 # MgeID: mge:1873 # MgeName: LL-H # Cross-refs: genbank:acc:YP_001285880;genbank:gi:148750838;genbank:GeneID:5220405 Probab=98.93 E-value=6.5e-09 Score=65.48 Aligned_cols=396 Identities=11% Similarity=0.086 Sum_probs=190.9 Q ss_pred Cchhhhhhcccccccc-----cc-------cccCCchHH------HHHhhcCCCCcce-ec------hhhhhccHHHHHH Q lcl|Aclame:pro 1 MDSVKKFFNFEKRQTS-----QV-------IELNKDDEK------LLEWLGISPSTIS-VK------GKNALKVATVFAC 55 (429) Q Consensus 1 Mg~~~~~~~~~~~~~~-----~~-------~~~~~~~~~------~~~~~~~~~~~~~-~~------~~~a~~~~~v~~~ 55 (429) ||+|+++.+++++-.. +. .....+... +-.|.......+. .+ .+.......-..+ T Consensus 1 m~~~~~ik~~~~~~~~~~~~~~~~~~i~d~~~i~~~~~~~~~i~~~~~~Y~g~~~~l~~~~~~~~~~~~~~~slnl~~~i 80 (505) T protein:vir:79 1 MAFWDTLKNLFRKGSAAVGMTKSLGQIIDDPRINLPADEVERIARDKRYYMDDFKQVTHKNSYGDTQKHELQSVNVTKLA 80 (505) T ss_pred CchHHHHHHHHHHhhhhhcchhhhhhhhcccCCCCCHHHHHHHHHHHHHhcCCCccccccccCCCccccceeecchHHHH Confidence 9999999887765211 00 012222211 1122221111110 00 0011122334556 Q ss_pred HHHHHHhhccCceEEEecCCceeeeeecchhhhhhcccCcCCCCHHHHHHHHHHHHHhhCCeEEEEeeCCCCceEEEEee Q lcl|Aclame:pro 56 IKILSESVSKLPLKIYQEDEYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPI 135 (429) Q Consensus 56 i~~ia~~ia~~~~~~~~~~~~~~~~~~~~~~~~~l~~~PN~~~s~~~~~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~l 135 (429) ++..|+-+..=|..+...++ .....+..++. .-.........+.+.+..|.+++.+..+. |. ..+..+ T Consensus 81 ~~~~A~ll~~e~~~i~~~d~-----~~~e~l~~i~~-----~n~f~~~~~~~~e~a~a~G~~~~k~~~D~-~~-~~i~~v 148 (505) T protein:vir:79 81 SAKLASLIFNEQCQVTVSDE-----TANDFLDDVFQ-----QNDFYTTFEEKLEEWIALGSGCVRPYVDS-GK-IKLAWA 148 (505) T ss_pred HHHHHhhhcCCCceeecCCh-----HHHHHHHHHHH-----hccHHHHHHHHHHHHhhcCCeEEEEEEeC-Cc-eEEEEE Confidence 66667666554444332221 11112222232 12345566777888888999998887763 33 346666 Q ss_pred CCcceEEEE-cCCccee-----------------eeee--------EE----Eeecc-c----CceEE------------ Q lcl|Aclame:pro 136 DASKVTVYI-DDVGLLN-----------------SKTK--------MW----YVVNT-G----GQQRV------------ 168 (429) Q Consensus 136 ~p~~v~~~~-~~~~~~~-----------------~~~~--------~~----~~~~~-~----g~~~~------------ 168 (429) +|+.+-+.. +...... +... .+ ..+.. + |..+. T Consensus 149 ~ad~~~P~~~d~~~~~~~a~~~~~~~~~~~~~~~yt~lE~h~~~~~~~~I~n~ly~~~~~~~lG~~v~l~~~~~~~~l~~ 228 (505) T protein:vir:79 149 TADQVYPLQADTNQVNELAIASRTTEVENHRTIYYTLLEFHQWDHGDYVITNELYRSEAAETVGINVPLNSLEQYEGLEP 228 (505) T ss_pred cCCeeEEEEEcCCCeEEEEEEEEEEEecCCcceEEEEEEEEEecCceEEEEEEEEecCCCCccCcccchhhcccccccCc Confidence 777765532 2221100 0000 00 00000 0 11110 Q ss_pred ------EccceEEEeecCCCC----CcccccCHHHHHHHHHHHHHHHHHHHHHHHHccCCcceE----EEeCCCCCHHHH Q lcl|Aclame:pro 169 ------LKPEEILHFKNGITL----DGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGL----VQYVGDLNEDAK 234 (429) Q Consensus 169 ------~~~~evih~~~~~~~----~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~----~~~~~~~~~e~~ 234 (429) ++.--+.||+.+.+. ..+.|.|.+.-+...++..+........-++.|-..-.+ +........+.. T Consensus 229 ~~~~~g~~~p~f~~~~~~~~N~~~~~splG~S~~~~~~~~id~lD~~~s~~~~e~~~g~~~i~v~~~~l~~~~~~~~~~~ 308 (505) T protein:vir:79 229 QVKITGLKHPLFAFYRNKGANNKNFTSPMGMSLIDNSYTVIDAINRTHDQFVDEVKKGQRRLIVPAEWLKTGSSYGGQAS 308 (505) T ss_pred ceeecCCCcceEEEecCCcccccccCCccCCchhhhhHHHHHHHHHHHHHHHHHHHhcccceeechHHhcccCCCCcccc Confidence 011124566643232 235799999999998888887777777777765443222 222212111111 Q ss_pred HHHHHHHH---HHhcccccccceeecCCCceeEecCCChhHHHHHHHHHHHHHHHHHHhcCChhhcCCccccccccHHHH Q lcl|Aclame:pro 235 KVFRENFE---SMSSGLQNSHRIALMPVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKATLNNIEQQ 311 (429) Q Consensus 235 ~~~~~~~~---~~~~g~~~~~~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~fgvp~~~l~~~~~~~~~n~~~~ 311 (429) ......|. ..|.+.. .=+++..++.++....+-++.+..+...++|+...|+++..++....+.. ++.+. T Consensus 309 ~~~~~~fd~~~~~y~~~~------~~~~~~~i~~~~~~ir~e~~~~~l~~~l~~i~~~~g~s~~~~~~~~~~~~-TAtei 381 (505) T protein:vir:79 309 ETHPPMFDPDETVYQAMY------GDASEVGFHDATSPIRVADYQATMDFFLREFENQTGLSQGTFTTSPSGIQ-TATEV 381 (505) T ss_pred cccccCCCccceeeeecc------CCCCCCceEEecccCCHHHHHHHHHHHHHHHHHHhCCChhhcCCCccccc-hHHHH Confidence 00000010 1111110 01223457777777777788999999999999999999999986544322 22222 Q ss_pred -------------HHHHHHHHHhHHHHHHHHHHHHhhccchh------hcchhhhhhhhhhHhhhhHHHHHHHHHHHHhC Q lcl|Aclame:pro 312 -------------QQQFYTDTLQATLTMYEQEMTYKLFLDSE------LDKGFYSKFNVDAILRADIKTRYEAYRTGIQG 372 (429) Q Consensus 312 -------------~~~~~~~~l~P~~~~i~~~l~~~ll~~~~------~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~ 372 (429) ....++.+|..+++.|........+...+ ....+.+.|++++-...|.++..+...+++.+ T Consensus 382 ~s~~~~l~~t~~~~~~~~~~al~~li~~i~~~~~~~~~~~~g~~~~~~~~~~~~i~v~f~d~i~~d~~~~~~~~~~~v~~ 461 (505) T protein:vir:79 382 VTNNSQTYQTRSSYITQVEKTIKALTYAILELASVPSFYADGQARWTGDVDSLDITINFNDGVFVDQESKRAADLQAVQA 461 (505) T ss_pred HHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccCCCCceeEEEEeCCCCCCCHHHHHHHHHHHHHc Confidence 12334445555555544332211111110 11123455666666788999999999999999 Q ss_pred CCCCHHHHHHHh-CCCCCCCcceeeeccccccccccccccCCCCCCCCCCCCCCCC Q lcl|Aclame:pro 373 GFLKPNEARSKE-DLPPEAGGDRLLVNGNMLPIDMAGQAYLKGGDTNGEVSKEGNE 427 (429) Q Consensus 373 g~~t~NE~R~~~-Gl~~~~~gD~~~~~~n~~~~~~~~~~~~~~g~~~~~~~~~~~~ 427 (429) |+|+.-+++... |++.- ..++ -+..+. .+.+...++..+-++| T Consensus 462 Gi~s~e~~l~~~~~~~ee-ea~~-----el~ri~------~E~~~~~p~~~~~gg~ 505 (505) T protein:vir:79 462 QVMPKKQFLMRNYGLDEE-EADE-----WLAQID------AENSTAEPEFNQFGGD 505 (505) T ss_pred CCCCHHHHHHhcCCCChH-HHHH-----HHHHHH------HhccccCCCchhccCC Confidence 999999887654 54431 1110 011110 0111112223333333 No 152 >protein:vir:7768 Length: 484 # NCBI annotation: gp14 # Family: family:all:524 # MgeID: mge:149 # MgeName: Bxz2 # Cross-refs: genbank:acc:NP_817602;genbank:gi:29566032;genbank:GeneID:1259226 Probab=98.92 E-value=1e-08 Score=64.35 Aligned_cols=396 Identities=13% Similarity=0.036 Sum_probs=171.2 Q ss_pred Cch-------------hhhhhcccccccccccccCCchHHHHHhhcCCCCc--c--eechh--h-hhccHHHHHHHHHHH Q lcl|Aclame:pro 1 MDS-------------VKKFFNFEKRQTSQVIELNKDDEKLLEWLGISPST--I--SVKGK--N-ALKVATVFACIKILS 60 (429) Q Consensus 1 Mg~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~--~~~~~--~-a~~~~~v~~~i~~ia 60 (429) |+. +.++.+....... ....+-++....... . .+..+ . ...+....-+|+..+ T Consensus 1 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-------rl~~l~~Yy~G~~~i~~~~~~~~~~~~~~~~~~n~~~~ivd~~~ 73 (484) T protein:vir:77 1 MTSPLQKQENVDPEKAREEMLNLFTERTQ-------DLGDNTAYYESERRPDAVGVTVPQQMQKLLAHVGYPRLYIDAIA 73 (484) T ss_pred CCCcccccCCCCHHHHHHHHHHHHHHHHH-------HHHHHHHHHhccccchhcccccchhHHhhhhhcCcHHHHHHHHH Confidence 221 1111111000000 000011111111000 0 01000 0 011233344566665 Q ss_pred HhhccCceEEEecCCceeeeeecchhhhhhcccCcCCCCHHHHHHHHHHHHHhhCCeEEEEeeCCCCce-------EEEE Q lcl|Aclame:pro 61 ESVSKLPLKIYQEDEYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKV-------QALW 133 (429) Q Consensus 61 ~~ia~~~~~~~~~~~~~~~~~~~~~~~~~l~~~PN~~~s~~~~~~~~~~~~l~~G~~~~~~~~~~~g~~-------~~l~ 133 (429) ..+--..|.+ .++. .....+..++. + -........+..+++.+|.||+.+.++..|.. ..+. T Consensus 74 ~~l~~~g~~~---~~~~---~~~~~l~~i~~-~----N~~d~~~~~~~~~a~~~G~a~~~v~~~~~~~~~~~~~~~~~i~ 142 (484) T protein:vir:77 74 ARQELEGFRL---GGAD---KADEQLWDWWQ-A----NDLDIESTLGHTDSLVHGRSYITISKPDPNIDPGVDPEVPIIR 142 (484) T ss_pred hhhccCceec---CCcc---hhHHHHHHHHH-h----cCHhHHHHHHHHHHhhcCceEEEEecCCCCcccccccccceEE Confidence 5443334432 1111 11122333332 1 23456678889999999999999988887754 2477 Q ss_pred eeCCcceEEEEcCCcceeeeee---------------------EEEeecccCceEE-------EccceEEEeecCCCCCc Q lcl|Aclame:pro 134 PIDASKVTVYIDDVGLLNSKTK---------------------MWYVVNTGGQQRV-------LKPEEILHFKNGITLDG 185 (429) Q Consensus 134 ~l~p~~v~~~~~~~~~~~~~~~---------------------~~~~~~~~g~~~~-------~~~~evih~~~~~~~~~ 185 (429) +++|..+.+.++.......... .+++...+|.... +..-.|++|.+...... T Consensus 143 ~~~p~~~~~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~g~vPvv~f~N~~~~~~ 222 (484) T protein:vir:77 143 VEPPTNLYAQIDPRTRQVMRAIRAIEDEEGNEVIGATLYLPNNTVIWNREDGQWVQVANVAHNLEMVPVIPIPNRTRLSD 222 (484) T ss_pred EeccceeEEEecCCCCceEEEEEEEEeecCCcEEEEEEEecCeEEEEEecCCceEeeccccCCCCCcceEEeccccccCc Confidence 7888888877764311100000 0111111221111 11123677775555566 Q ss_pred ccccCHHHH-HHHHHHHHHHHHHHHHHHHHccCCcceEEEeCCCCCHHHHH--HHHHHHHHHhcccccccceeecC-CCc Q lcl|Aclame:pro 186 LVGVPTMEY-LKSTLENSASADKFINNFYKQGLQVKGLVQYVGDLNEDAKK--VFRENFESMSSGLQNSHRIALMP-VGY 261 (429) Q Consensus 186 ~~G~s~~~~-~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~~e~~~--~~~~~~~~~~~g~~~~~~~~vl~-~g~ 261 (429) ..|.|-+.. +...++......-......+..+.|.-++.-- ...+...+ .-...|.. ..+.++.++ ++. T Consensus 223 ~~G~s~i~~~v~~L~Da~~~~~s~~~~~~~~~a~p~~~i~G~-~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~ 295 (484) T protein:vir:77 223 LYGTTEITPELRSVTDAAARTLMLMQATAELMGVPQRLLFGV-KGEELGVDPETGQTLFDA------YLARILAFEDHES 295 (484) T ss_pred cCCcccchHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHhCC-Ccchhcccccccchhhhh------hhhhhcccCCCCc Confidence 678886653 33334444444333333334344444444311 11111111 01111211 123455655 468 Q ss_pred eeEecCCChhHHHHHHHHHHHHHHHHHHhcCChhhcCCccccccccHHHHH-------------HHHHHHHHhHHHHHHH Q lcl|Aclame:pro 262 QFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKATLNNIEQQQ-------------QQFYTDTLQATLTMYE 328 (429) Q Consensus 262 ~~~~~~~~~~d~~~~e~~~~~~~~Ia~~fgvp~~~l~~~~~~~~~n~~~~~-------------~~~~~~~l~P~~~~i~ 328 (429) ++.++..+.-+. +++..+..+..++.+-++|+..+++... +-++.++.. ...+...+.-+++.+. T Consensus 296 ~~~q~~~~~~e~-~~~~l~~~i~~~s~~~~~p~~~fg~~~~-n~~Sg~Al~~~~~~l~~ka~~k~~~f~~~l~~~~~l~~ 373 (484) T protein:vir:77 296 KAQQFSAAELRN-FVDALDALDRKAAAYTGLPPYYLSFSSE-NPASAEAIRSSESRLVKTVERKNKIFGGAWEQAMRVAY 373 (484) T ss_pred eeEeecCCChHH-HHHHHHHHHHHHhcccCCCHHHhccccC-cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Confidence 887776554443 7888999999999999999999976432 211221111 1111112222222221 Q ss_pred HHHHHhhccchhhcchhhhhhhhhhHhhhhHHHHHHHHHHHHhCC--CCCHHHHHHHhCCCCCC--Ccceee----ec-- Q lcl|Aclame:pro 329 QEMTYKLFLDSELDKGFYSKFNVDAILRADIKTRYEAYRTGIQGG--FLKPNEARSKEDLPPEA--GGDRLL----VN-- 398 (429) Q Consensus 329 ~~l~~~ll~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g--~~t~NE~R~~~Gl~~~~--~gD~~~----~~-- 398 (429) ...+. .........+++.+......+..+.++.+.+++.+| +++..-+++++|+-+.+ ...... .. T Consensus 374 ~~~~~----~~~~~~~~~i~v~w~~~~~~s~~~~ad~~~kl~~~g~gi~s~et~~~~l~~~~~~~~e~~~~~~ee~~~~~ 449 (484) T protein:vir:77 374 KVMNG----GDIPPEYYRMESIWRDPSTPTYAAKADAATKLYNNGQGVIPKERARIDMGYSITEREEMRKWDEEEQAQGL 449 (484) T ss_pred HHhCC----CCcccccccceEEecCCCCCCHHHHHHHHHHHHhccCCCCCHHHHHhcCCCChhHHHHHHHHHHHHHHHHH Confidence 11110 000001122344444556778889999999998876 88888899999986543 111110 00 Q ss_pred cccccccccccccCCCCCCCCC-----CCCCCCCCC Q lcl|Aclame:pro 399 GNMLPIDMAGQAYLKGGDTNGE-----VSKEGNEGN 429 (429) Q Consensus 399 ~n~~~~~~~~~~~~~~g~~~~~-----~~~~~~~~n 429 (429) ..+.++... ....+|+.+.. .++.+.+-+ T Consensus 450 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 483 (484) T protein:vir:77 450 GLMGTMFGT--DPSGGGNPDNPETPEPQPNPAEEAA 483 (484) T ss_pred HHHhhhccc--cccCCCCCCCCCcccccCCCccccC Confidence 001111111 11111111111 111111111 No 153 >protein:vir:80959 Length: 499 # NCBI annotation: gp3 # Family: family:all:898 # MgeID: mge:1886 # MgeName: A500 # Cross-refs: genbank:acc:YP_001468389;genbank:gi:157324963;genbank:GeneID:5601394 Probab=98.92 E-value=5.4e-09 Score=65.89 Aligned_cols=401 Identities=14% Similarity=0.086 Sum_probs=181.3 Q ss_pred Cchhhhhhccccc--------ccccccccCCchH---HHH---Hhh-cCCCCcce--------echhhhhccHHHHHHHH Q lcl|Aclame:pro 1 MDSVKKFFNFEKR--------QTSQVIELNKDDE---KLL---EWL-GISPSTIS--------VKGKNALKVATVFACIK 57 (429) Q Consensus 1 Mg~~~~~~~~~~~--------~~~~~~~~~~~~~---~~~---~~~-~~~~~~~~--------~~~~~a~~~~~v~~~i~ 57 (429) =+|++++.+++++ +......+..+.. .+. .+. |....... .-.+.-+.......+++ T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~i~~~~~~Y~g~~~~~~~~~~~~~~~~~~~~~~s~n~~~~iv~ 82 (499) T protein:vir:80 3 NQIIAGVKGVMRRMGLLKSLKDVTDHKKVNANDEDYKYIDMWKRLYQGNYAEWHNLNYEHNGNPVNRRQLSMNLPKVTAK 82 (499) T ss_pred hHHHHHHHHHHHHhccccchhhhhcCCCCcCCHHHHHHHHHHHHHhcCCcchhhccccccCCCccccceeecchHHHHHH Confidence 0111111111111 0000111112221 111 122 11110000 00011223344566677 Q ss_pred HHHHhhccCceEEEecCCceeeeeecchhhhhhcccCcCCCCHHHHHHHHHHHHHhhCCeEEEEeeCCCCceEEEEeeCC Q lcl|Aclame:pro 58 ILSESVSKLPLKIYQEDEYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDA 137 (429) Q Consensus 58 ~ia~~ia~~~~~~~~~~~~~~~~~~~~~~~~~l~~~PN~~~s~~~~~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~l~p 137 (429) ..|+.+.+=|..+...++ .+...|+ +-...-........++...+..|.+|+.+..+.+|.+ .+-.++| T Consensus 83 ~~a~~l~~ep~~i~~~d~---------~~~e~l~-~~~~~n~f~~~~~~~~~~a~~~G~~~~~~~~D~~~~~-~i~~v~a 151 (499) T protein:vir:80 83 YMSKLLFNEKVKINIDDE---------TAEEFVL-NVLKTNGFTKNMERYIEYGEAMGGFVIKVYHDGNKNV-KVSFATA 151 (499) T ss_pred HHHHhhhCCcceEeeCCH---------HHHHHHH-HHHhhccHHHHHHHHHHHHhhcCcEEEEEEECCCCcE-EEEEEcC Confidence 788877766665543221 2223332 1112233566667778888899999999999888765 5677778 Q ss_pred cceEEEEcCCcceeeee-------------------------eEEEe----ec-cc----CceEEE-------------- Q lcl|Aclame:pro 138 SKVTVYIDDVGLLNSKT-------------------------KMWYV----VN-TG----GQQRVL-------------- 169 (429) Q Consensus 138 ~~v~~~~~~~~~~~~~~-------------------------~~~~~----~~-~~----g~~~~~-------------- 169 (429) ..+-+...+.+....-. ..|+. +. .+ |....+ T Consensus 152 ~~~~Pi~~d~~~~~~~~f~~~~~~~~~~y~~lE~h~~~~~~~~~y~I~n~~~~~~~~~~lG~~v~l~~~~~~~~~~~~~~ 231 (499) T protein:vir:80 152 DCMYPLSNDSENVDECLIANSFHKNNKYYKLLEWNEWKGEKEEVYTVTTELYQSDDPNELGGKVSLKLLFNDIEPVVPLP 231 (499) T ss_pred CceEEEEecCCCeEEEEEEEEEeecCeEEEEEEEEEecccceeeEEEEEEEEeccCccccCcccchhhhccCcCCceeec Confidence 77765333222110000 00000 00 00 111100 Q ss_pred --ccceEEEeecCCC----CCcccccCHHHHHHHHHHHHHHHHHHHHHHHHccCCcceEEE-----eCCCCCHHHHHHHH Q lcl|Aclame:pro 170 --KPEEILHFKNGIT----LDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQ-----YVGDLNEDAKKVFR 238 (429) Q Consensus 170 --~~~evih~~~~~~----~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~-----~~~~~~~e~~~~~~ 238 (429) ..--+.||+.+-+ .....|.|.+.-+...++..........+-++.+ ....++. ...+.+.+....+. T Consensus 232 ~~~~p~f~~~~~~~~N~~~~~splG~S~~~~~~~lid~lD~~~s~~~~e~~~~-~~~i~v~~~~l~~~~~~~g~~~~~~~ 310 (499) T protein:vir:80 232 SLTRPTFIYIKPNIANNKNLTSPLGISVYANALDTLKTLDLMFDSYYQEFKLG-KKKVLVPSSFVKTAVNLDGSTTQYFD 310 (499) T ss_pred CCCccceEeecCCccccccCCCccCCchHhhHHHHHHHHHHHHHHHHHHHHhc-ccceecchhhhhccCCCCCCcccCCC Confidence 0011455654322 2345699999999988888877777777777664 3333331 11111100000000 Q ss_pred HHHHHHhcccccccceeecCCCceeEecCCChhHHHHHHHHHHHHHHHHHHhcCChhhcCCccccccccHHHH------- Q lcl|Aclame:pro 239 ENFESMSSGLQNSHRIALMPVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKATLNNIEQQ------- 311 (429) Q Consensus 239 ~~~~~~~~g~~~~~~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~fgvp~~~l~~~~~~~~~n~~~~------- 311 (429) . -.+.+.. ....--+++-.++.++.....-++.+..+...++|....|+++..++....+.. ++.+. T Consensus 311 ~-~~~~~~~----~~~~~~~~~~~i~~~~~~ir~e~~~~~l~~~l~~i~~~~g~s~~~fg~~~~g~~-TAtei~s~~~~l 384 (499) T protein:vir:80 311 S-TDEAFFL----YQGEQDDNGKAIKDISVEIRSTEFIESINAMLRIYAMQVGLSAGTFTFDENGLK-TATEVVSEKSET 384 (499) T ss_pred c-ccceeeE----eeccCCCCcCceeEecCcCChHHHHHHHHHHHHHHHHhcCCChhhcCCCcccch-hHHHHHHHHHHH Confidence 0 0000100 000011223346666666666667888999999999999999999986544322 22221 Q ss_pred ------HHHHHHHHHhHHHHHHHHHHHHhhccchhhcchhhhhhhhhhHhhhhHHHHHHHHHHHHhCCCCCHHHHHHHh- Q lcl|Aclame:pro 312 ------QQQFYTDTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKE- 384 (429) Q Consensus 312 ------~~~~~~~~l~P~~~~i~~~l~~~ll~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~- 384 (429) ....++.+|..+++.|........+..........+.++++.-...|..+.++...+++.+|+|+.-.++... T Consensus 385 ~~~~~~~~~~~~~~l~~l~~~il~~~~~~~~~~~~~~~~~~v~v~f~d~i~~d~~~~~~~~~~~~~~Gi~S~et~l~~~~ 464 (499) T protein:vir:80 385 YQTKNSHSQLIEQGIKEMIVSILEVGKLIKAYDGDTVELDTITVDFDDSIAQDEDTTINRYTTAKNQGMIPLKIALQRAW 464 (499) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCCCccceEEEeCCCCCCCHHHHHHHHHHHHHcCCCCHHHHHhhcC Confidence 1222333344444443332111111111122234555555666778999999999999999999999987654 Q ss_pred CCCCCCCcceeeeccccccccccccccCCCCCCCCCCC Q lcl|Aclame:pro 385 DLPPEAGGDRLLVNGNMLPIDMAGQAYLKGGDTNGEVS 422 (429) Q Consensus 385 Gl~~~~~gD~~~~~~n~~~~~~~~~~~~~~g~~~~~~~ 422 (429) |.+. +..++-+.-.........+.++. +|.. ++.+ T Consensus 465 ~~~d-~ea~~el~~i~~E~~~~~~~~d~-~g~~-ge~e 499 (499) T protein:vir:80 465 NITE-AEADEWAEMLAKEKQAEIPNNDM-TGIF-GEEE 499 (499) T ss_pred CCCh-HHHHHHHHHHHHHhhcCCCCCCc-cccC-CCCC Confidence 5543 21111110000000000111111 1110 1111 No 154 >protein:vir:99916 Length: 504 # NCBI annotation: gp3 # Family: family:all:524 # MgeID: mge:1611 # MgeName: Halo # Cross-refs: genbank:acc:YP_655520;genbank:gi:109392290;genbank:GeneID:4157085 Probab=98.92 E-value=1.8e-09 Score=68.56 Aligned_cols=407 Identities=7% Similarity=-0.044 Sum_probs=160.2 Q ss_pred CchhhhhhcccccccccccccCCchHHHHHhhcCCC--Ccceechhhhhc-----cHHHHHHHHHHHHhhccCceEEEec Q lcl|Aclame:pro 1 MDSVKKFFNFEKRQTSQVIELNKDDEKLLEWLGISP--STISVKGKNALK-----VATVFACIKILSESVSKLPLKIYQE 73 (429) Q Consensus 1 Mg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~a~~-----~~~v~~~i~~ia~~ia~~~~~~~~~ 73 (429) +-+++++.....+... ....+.++.-... ..........++ .....-+|+.+++.+---.|. . T Consensus 23 ~~~i~~L~~~~~~~~~-------r~~~l~~YY~G~~~i~~~~~~~p~~~~~~~~v~n~~~~iVd~~a~rl~~~Gf~---~ 92 (504) T protein:vir:99 23 VDKVNGLYQQLVDRTP-------RNLLRASFYDGKYAIRQIGNLIPPEYLRTATVLGWSAKAVDTLARRCNLESFV---W 92 (504) T ss_pred HHHHHHHHHHHHHHhH-------HHHHHHHHHhccccchhccccccHHHHHHhhccCcHHHHHHHHHhhhccceee---C Confidence 2222222211110000 0000000100000 001111111111 122233455555433222232 2 Q ss_pred CCceeeeeecchhhhhhcccCcCCCCHHHHHHHHHHHHHhhCCeEEEEeeCCCCceE-EEEeeCCcceEEEEcCCcceee Q lcl|Aclame:pro 74 DEYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQ-ALWPIDASKVTVYIDDVGLLNS 152 (429) Q Consensus 74 ~~~~~~~~~~~~~~~~l~~~PN~~~s~~~~~~~~~~~~l~~G~~~~~~~~~~~g~~~-~l~~l~p~~v~~~~~~~~~~~~ 152 (429) .++. .....+..++. -|. .......+..+.+.+|.||+.+..+.+|.+. .+.+++|..+.+.++....... T Consensus 93 ~d~~---~~~~~l~~i~~--~N~---ld~~~~~~~~~a~iyG~af~~v~~~~d~~~~~~I~~~sP~~~~~iyD~~~~~~~ 164 (504) T protein:vir:99 93 PDGD---YGSIGGPDVWD--ENF---FATKANNAMVSSLIHGPAFLINTEGGAGEPDSLIHVKSAMQATGEWNSRRNAMD 164 (504) T ss_pred CCCC---hhhHHHHHHHH--hcC---hhhHHHHHHHHHHhhCceeEEEecCCCCCceeEEEEeccceeEEEEeCCCCcee Confidence 2111 00112333332 233 2356678888999999999999988888764 5678899998887765322211 Q ss_pred eeeEEEeecccCceE---EEccce------------------------EEEeecCCCCCcccccCHHH-HHHHHHHHHHH Q lcl|Aclame:pro 153 KTKMWYVVNTGGQQR---VLKPEE------------------------ILHFKNGITLDGLVGVPTME-YLKSTLENSAS 204 (429) Q Consensus 153 ~~~~~~~~~~~g~~~---~~~~~e------------------------vih~~~~~~~~~~~G~s~~~-~~~~~i~~~~~ 204 (429) ....++....+|... .+.+.. |++|.+.......+|.|-+. .+...++.... T Consensus 165 ~a~~~~~~d~~g~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~gvPvV~~~n~~~~~~~~G~sei~~~v~~l~Da~~~ 244 (504) T protein:vir:99 165 SLLSITSRDAEGHPTGIALYEDGVTVTADMDDDGDWHADVRTHKLGVPVEVLPYKPREDRPLGSSRITRPVMSLQQRALK 244 (504) T ss_pred EEEEEEEecCCCeEEEEEEEcCCcEEEEEEcCCceeeeccccCCCCcceEEecccccCccccCcccchhhHHHHHHHHHH Confidence 112222222333211 122222 55555443445567777543 33333333333 Q ss_pred HHHHHHHHHHccCCcceEEE-eCC-CCCH---HHHHHHHHHHHHHhcccccccceeec-CCCceeEecCCChhHHHHHHH Q lcl|Aclame:pro 205 ADKFINNFYKQGLQVKGLVQ-YVG-DLNE---DAKKVFRENFESMSSGLQNSHRIALM-PVGYQFQPISLNMSDAQFLEN 278 (429) Q Consensus 205 ~~~~~~~~~~ng~~~~~~~~-~~~-~~~~---e~~~~~~~~~~~~~~g~~~~~~~~vl-~~g~~~~~~~~~~~d~~~~e~ 278 (429) ..-......+-.+.|.-++. ... .... +..+.++......+.=..+. ...+. ..+.++.++....-+ .+++. T Consensus 245 ~~~~~~~~~e~~a~p~r~i~G~~~~~~~~~d~~~~~~~~~~~~~i~~~~~~~-~~~~~~~~~~~~~q~~~~~l~-~~~~~ 322 (504) T protein:vir:99 245 GCIRMDGHADVYSFPQLILLGADAKNFRNKDGSMKPAWQIALARVFALPDDE-DEPDAARARADVKQFPASSPQ-PHIEM 322 (504) T ss_pred HHHHHHHHHHHhcchhhhhccCCccccccccccccchhhhhhhhhhcCCCcc-ccccccCccceeeecCCCChH-HHHHH Confidence 32222222232333333332 111 1111 11112222222221111111 11111 124556555544222 37899 Q ss_pred HHHHHHHHHHHhcCChhhcCCccccccccHHHH---HHHHHHHHHhHHHHHHHHHHHHhhc----cchh----hcchhhh Q lcl|Aclame:pro 279 TELTIRQIATAFGIKMHQLNDLSKATLNNIEQQ---QQQFYTDTLQATLTMYEQEMTYKLF----LDSE----LDKGFYS 347 (429) Q Consensus 279 ~~~~~~~Ia~~fgvp~~~l~~~~~~~~~n~~~~---~~~~~~~~l~P~~~~i~~~l~~~ll----~~~~----~~~~~~~ 347 (429) ++..+..||..=++|+..||.....+-++.+.. ...+... +.-..+.|...|.+-+. .... ......+ T Consensus 323 l~~~i~~~a~~t~~P~~~lG~~~~~n~sSa~Ai~~~~~~L~~k-a~~k~~~f~~~l~~~~rla~~~~~~~~~~~~~~~~~ 401 (504) T protein:vir:99 323 LEQIAMMFSGETSIPVESLGFSNRANPTSADAYIASREDLIAE-AEGATDDWSPAFRRSMIRALAIKNGLDRIPPEWKTI 401 (504) T ss_pred HHHHHHHHHhhhCCCHHHhcccccccccHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhcCCCccccccccc Confidence 999999999999999999986543332222222 1111111 11122233333322110 0000 0111223 Q ss_pred hhhhhhHhhhhHHHHHHHHHHHHhCCCCC--H-HHHHHHhCCCCCC---Ccceeeecccccccccc-----------ccc Q lcl|Aclame:pro 348 KFNVDAILRADIKTRYEAYRTGIQGGFLK--P-NEARSKEDLPPEA---GGDRLLVNGNMLPIDMA-----------GQA 410 (429) Q Consensus 348 ~fd~~~l~~~d~~~~~~~~~~~~~~g~~t--~-NE~R~~~Gl~~~~---~gD~~~~~~n~~~~~~~-----------~~~ 410 (429) ++.+.+....+..+.++++.+++.+|... . .-+++++|+.+.+ ..++-..-.....++.. ... T Consensus 402 ~v~w~d~~~~s~a~~aDa~~Kl~~ag~~l~~~~~~l~~~lg~~~~ei~r~~~e~~~~~~~~~~~~l~~~~~~~~~~~~~~ 481 (504) T protein:vir:99 402 DSKFRSPLYLSKAAQADAGAKMLGAGPEWLKETEVGLELLGLTPQQAKRALAERRRASSVSIIEALNRRQQEAATAGEDQ 481 (504) T ss_pred eeEecCCCccCHHHHHHHHHHHHhhccccccchHHHHhhcCCCHHHHHHHHHHHHHHhhHHHHHHHhcccCCCCCCCCCC Confidence 33334556778889999999999988532 2 3356777886532 00000000000000000 000 Q ss_pred cC-----CCCCCCCCCCCCCCCC Q lcl|Aclame:pro 411 YL-----KGGDTNGEVSKEGNEG 428 (429) Q Consensus 411 ~~-----~~g~~~~~~~~~~~~~ 428 (429) .. .+.+.++..+.+.-+| T Consensus 482 ~~~~~e~a~~~~~~~~~~p~~~~ 504 (504) T protein:vir:99 482 DQGAGEPPANEPPAALGRPTLVG 504 (504) T ss_pred CcCCCCCCCCCCCccCCCcccCC Confidence 00 0000001111111111 No 155 >protein:vir:104082 Length: 485 # NCBI annotation: gp14 # Family: family:all:524 # MgeID: mge:1656 # MgeName: Che12 # Cross-refs: genbank:acc:YP_655593;genbank:gi:109392464;genbank:GeneID:4156950 Probab=98.91 E-value=9e-09 Score=64.69 Aligned_cols=398 Identities=11% Similarity=0.024 Sum_probs=170.6 Q ss_pred Cc-------hhhhhhcccccccccccccCCchHHHHHhhcCCCCc--ceech-hh----hhccHHHHHHHHHHHHhhccC Q lcl|Aclame:pro 1 MD-------SVKKFFNFEKRQTSQVIELNKDDEKLLEWLGISPST--ISVKG-KN----ALKVATVFACIKILSESVSKL 66 (429) Q Consensus 1 Mg-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-~~----a~~~~~v~~~i~~ia~~ia~~ 66 (429) |. +++.+.....+.... ...+-++.-..... ..... .. .........+|+.++..+--. T Consensus 8 ~~~~~~~~~~~~~l~~~~~~~~~r-------~~~~~~Yy~G~~~i~~~~~~~~~~~~~~~~~~n~~~~ivd~~~~~l~~~ 80 (485) T protein:vir:10 8 QEEIEDPAIARDEMVSAFEDSTQN-------LKTNTSYYEAERRPEAIGVTVPIQMQSLLAHVGYPRLYVDSIAERQAVE 80 (485) T ss_pred CCCCCCHHHHHHHHHHHHHHHHHH-------HHHHHHHHhcCCcchhcCCCCChhhhhhhhhcCcHHHHHHHHHhhhccc Confidence 11 111111110000000 00011111000000 00000 00 011233455666666554323 Q ss_pred ceEEEecCCceeeeeecchhhhhhcccCcCCCCHHHHHHHHHHHHHhhCCeEEEEeeCCCCc-------eEEEEeeCCcc Q lcl|Aclame:pro 67 PLKIYQEDEYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGK-------VQALWPIDASK 139 (429) Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~l~~~PN~~~s~~~~~~~~~~~~l~~G~~~~~~~~~~~g~-------~~~l~~l~p~~ 139 (429) .|.+ .++. .....+..++. .-....+...+..+++.+|.||+++.++..+. ...+.+++|.. T Consensus 81 g~~~---~~~~---~~~~~~~~i~~-----~N~~d~~~~~~~~~a~i~G~ay~~v~~~e~~~~~~~~~~~~~i~~~~p~~ 149 (485) T protein:vir:10 81 GFRF---GDAD---EADEELWQWWQ-----ANNLDIEAPLGYTDAYVHGRSYITISRPDPQIDLGWDPNTPIIRVEPPTR 149 (485) T ss_pred ceec---CCCc---hhHHHHHHHHH-----hcCHhHHHHHHHHHHhhcCceEEEEeeCCcccccccCCCeeEEEEEccce Confidence 3332 1111 11122333332 12345677889999999999999988875432 22577788888 Q ss_pred eEEEEcCCcceeeeeeEEEeecccCce---EEEc-------------------------cceEEEeecCCCCCcccccCH Q lcl|Aclame:pro 140 VTVYIDDVGLLNSKTKMWYVVNTGGQQ---RVLK-------------------------PEEILHFKNGITLDGLVGVPT 191 (429) Q Consensus 140 v~~~~~~~~~~~~~~~~~~~~~~~g~~---~~~~-------------------------~~evih~~~~~~~~~~~G~s~ 191 (429) +.+.++...........++....++.. ..+. .-.|++|.+.......+|.|- T Consensus 150 ~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~g~vPvv~~~n~~~~~~~~G~s~ 229 (485) T protein:vir:10 150 MYAEIDPRIGRVSKAIRVAYDAEGNEIQAATLYTPNDIFGWYRVENEWQEWFNNPHGLGVVPVVPIPNRTRLSDLYGTSE 229 (485) T ss_pred eEEEEcCCCCceeEEEEEEEeeCCCeEEEEEEEeCCeEEEEEEcCCceEEeccccCCCCcccEEEeccccccCCCCCccc Confidence 887776432111111111111111110 0111 123566665544455678886 Q ss_pred HHH-HHHHHHHHHHHHHHHHHHHHccCCcceEEEeCCCCCHHHHH--HHHHHHHHHhcccccccceeecC-CCceeEecC Q lcl|Aclame:pro 192 MEY-LKSTLENSASADKFINNFYKQGLQVKGLVQYVGDLNEDAKK--VFRENFESMSSGLQNSHRIALMP-VGYQFQPIS 267 (429) Q Consensus 192 ~~~-~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~~e~~~--~~~~~~~~~~~g~~~~~~~~vl~-~g~~~~~~~ 267 (429) +.. +...++.............+..+.|.-++.-- ...+...+ .-...|.. ..+.++.++ ++.+|.+++ T Consensus 230 i~~~v~~liDa~~~~~s~~~~~~~~~a~p~~~i~G~-~~~~~~~~~~~~~~~~~~------~~~~i~~~~~~d~k~~q~~ 302 (485) T protein:vir:10 230 ITPELRSMTDAAARILMLMQATAELMGVPQRLIFGI-KPEEIGVDPETGQTLFDA------YLARILAFEDAEGKIQQFS 302 (485) T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHhcC-Ccccccccccccchhhhh------cccceeccCCCCceEEeec Confidence 543 33344443333333333334444454443311 00000000 00111111 124456655 577887776 Q ss_pred CChhHHHHHHHHHHHHHHHHHHhcCChhhcCCcccccccc---HHHH----------HHHHHHHHHhHHHHHHHHHHHHh Q lcl|Aclame:pro 268 LNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKATLNN---IEQQ----------QQQFYTDTLQATLTMYEQEMTYK 334 (429) Q Consensus 268 ~~~~d~~~~e~~~~~~~~Ia~~fgvp~~~l~~~~~~~~~n---~~~~----------~~~~~~~~l~P~~~~i~~~l~~~ 334 (429) .+.-+ .+++..+..+.+++..=++|+..+++... +.++ .... ....+...+..+++.+.. +... T Consensus 303 ~~~~~-~~~~~l~~~i~~~~~~~~~p~~~fg~~~~-n~~Sg~Al~~~~~~l~~k~~~k~~~f~~~l~~~~~l~~~-~~~~ 379 (485) T protein:vir:10 303 AAELA-NFTNALDQIAKQVAAYTGLPPQYLSTAAD-NPASAEAIRAAESRLIKKVERKNSIFGGAWEEAMRLAYR-MMKG 379 (485) T ss_pred ccchH-HHHHHHHHHHHHHhcccCCCHHHhccccC-chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhCC Confidence 55433 37888899999999999999999875432 1111 1111 122222333333332221 1110 Q ss_pred hccchhhcchhhhhhhhhhHhhhhHHHHHHHHHHHHhCC--CCCHHHHHHHhCCCCCC--Ccceeeecc--------cc- Q lcl|Aclame:pro 335 LFLDSELDKGFYSKFNVDAILRADIKTRYEAYRTGIQGG--FLKPNEARSKEDLPPEA--GGDRLLVNG--------NM- 401 (429) Q Consensus 335 ll~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g--~~t~NE~R~~~Gl~~~~--~gD~~~~~~--------n~- 401 (429) .........+++.+......+..+.++++.+++.+| +++..-+++.+|+.+.+ ......--. +. T Consensus 380 ---~~~~~~~~~i~v~w~~~~~~~~~~~ada~~kl~~ag~~~~s~et~~~~lg~~~~~~~~~~~~~ee~~~~~~~~~~~~ 456 (485) T protein:vir:10 380 ---GDVPPDMLRMETVWRDPSTPTYAAKADAASKLYNGGTGVIPRERARKDMGYSIAEREEMRRWDEEEAAMGLGLIGTM 456 (485) T ss_pred ---CCCcccceeeeEEecCCCCCCHHHHHHHHHHHHhccccCCCHHHHHHhCCCCHhHHHHHHHHHHHHHHHHHHHHHHh Confidence 000001123344444556788999999999999876 88888899999997643 111110000 00 Q ss_pred -ccccccccccCCCCCCCCCCCCCCCCCC Q lcl|Aclame:pro 402 -LPIDMAGQAYLKGGDTNGEVSKEGNEGN 429 (429) Q Consensus 402 -~~~~~~~~~~~~~g~~~~~~~~~~~~~n 429 (429) .+-+....+...+++.+...++.++++- T Consensus 457 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 485 (485) T protein:vir:10 457 VDPNPTVPGSPSPAPAPKPAALESGGDAA 485 (485) T ss_pred hccCCCCCCCCCccccccCcCCCCCCCCC Confidence 0111111111111111111122222222 No 156 >protein:vir:4782 Length: 522 # NCBI annotation: putative minor capsid protein 1 # Family: family:all:898 # MgeID: mge:104 # MgeName: MM1 # Cross-refs: genbank:acc:NP_150162;swissprot:trembl:q94m49;genbank:gi:26553451;uniprot:Q94M49;genbank:GeneID:955983 Probab=98.87 E-value=1.1e-08 Score=64.21 Aligned_cols=407 Identities=10% Similarity=0.057 Sum_probs=190.3 Q ss_pred Cchhhhhhccccccccc-----c------cccCCchHHHH---H---hh-cCCCCc------ceechhhhhccHHHHHHH Q lcl|Aclame:pro 1 MDSVKKFFNFEKRQTSQ-----V------IELNKDDEKLL---E---WL-GISPST------ISVKGKNALKVATVFACI 56 (429) Q Consensus 1 Mg~~~~~~~~~~~~~~~-----~------~~~~~~~~~~~---~---~~-~~~~~~------~~~~~~~a~~~~~v~~~i 56 (429) ||+|+++.+++++-... . ..+..+...+. . |. |..... .....+.......-..++ T Consensus 1 m~~~~~~k~~~~k~~~~~~~~~~~~i~~~~~i~~~~~~~~~i~~~~~~y~g~~~~~~~~~~~~~~~~~~~~slnl~~~i~ 80 (522) T protein:vir:47 1 MSLFQKVKDFFSRGRYYMQTSNLNSILEHPKIAVTQEEYDRIKRNLVYYQSKWDDVQYKNTDGDIKSRPMNHLPIARTAS 80 (522) T ss_pred CchHHHHHHHHHHHHHHhhcccchhccccCCCCCCHHHHHHHHHHHHHhcCCcccccccccCcchhcccceecchHHHHH Confidence 99999988877642211 0 01111222211 1 21 111100 000011122224445566 Q ss_pred HHHHHhhccCceEEEecCCceeeeeecchhhhhhcccCcCCCCHHHHHHHHHHHHHhhCCeEEEEeeCCCCceEEEEeeC Q lcl|Aclame:pro 57 KILSESVSKLPLKIYQEDEYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPID 136 (429) Q Consensus 57 ~~ia~~ia~~~~~~~~~~~~~~~~~~~~~~~~~l~~~PN~~~s~~~~~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~l~ 136 (429) +.+|+-+..=+..+.-.++ .....+..+|. .-.....+...+...+..|.+++.+..+. |. ..+-.++ T Consensus 81 ~~~A~lv~~e~~~i~v~d~-----~~~~~l~~~l~-----~n~f~~~~~~~~e~a~a~G~~a~k~~~d~-~~-~~i~~v~ 148 (522) T protein:vir:47 81 KKIASLVYNEQATITTKNE-----ILQKFLDDMLT-----NDRFNKNFERYLESCLALGGLAMRPYIDG-DK-VRVAFIQ 148 (522) T ss_pred HHHhhhhcCCcceeecCCh-----HHHHHHHHHHh-----hcchHHHHHHHHHHhhccCCEEEEEEEcC-Cc-eEEEEEc Confidence 6666666553333322211 11112223332 23345556677777788888888887763 33 2345555 Q ss_pred CcceEEE-EcCCcce-----------------eee------------------------eeEEEeeccc-----CceEEE Q lcl|Aclame:pro 137 ASKVTVY-IDDVGLL-----------------NSK------------------------TKMWYVVNTG-----GQQRVL 169 (429) Q Consensus 137 p~~v~~~-~~~~~~~-----------------~~~------------------------~~~~~~~~~~-----g~~~~~ 169 (429) +..+-+. .+..+.. .+. .+.+..+... |..+.+ T Consensus 149 ad~~~P~~~~~~~~~e~a~~~~~~~~~~~~~~~yt~lE~he~~~~~~~~~~~~~~~~~~~I~n~ly~~~~~~~lG~~v~l 228 (522) T protein:vir:47 149 APVFFPLESNTQDVSSAAILTKTIKSEGRKNVYYTLVEFHEWVTADGQETGSTNDKKYYRITNELYRSDVNDVLGQRVNL 228 (522) T ss_pred CCceEEEEEcCCceEEEEEEEEEEeecccceeEEEEEEEeeecccccccccccccCCceEEEEEEeecCCCcccCccccc Confidence 5555442 2211110 000 0000001100 111111 Q ss_pred ---------cc---------ceEEEeecCCCC----CcccccCHHHHHHHHHHHHHHHHHHHHHHHHccCCcceE----E Q lcl|Aclame:pro 170 ---------KP---------EEILHFKNGITL----DGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGL----V 223 (429) Q Consensus 170 ---------~~---------~evih~~~~~~~----~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~----~ 223 (429) .+ --..||+.+-+. ..+.|+|.+..+...++..+........-++.|-..-.+ + T Consensus 229 ~~~~e~~~l~~~~~~~~~~~Plf~y~~~~~~N~~~~~splG~S~~~~~~~~id~lD~~~s~~~~e~~~g~~~i~v~~~~l 308 (522) T protein:vir:47 229 SELDKYKNLEPVTVFENLSRPLFTYLKTPGMNNKDINSPLGLSIFDNAKTTIDFINRSYDEFMWEVRMGQRRVIVPEHLT 308 (522) T ss_pred cccccccCCCCceEeCCCCcceEEEecCCcccccccCCCcCCchhhhhHHHHHHHHHHHHHHHHHHHhccceeecchHHh Confidence 11 113466543222 346799999999888887777666666666655432222 2 Q ss_pred EeCCCC-CHH-HHHHHHHHHHHHhcccccccceeecCCCceeEecCCChhHHHHHHHHHHHHHHHHHHhcCChhhcCCcc Q lcl|Aclame:pro 224 QYVGDL-NED-AKKVFRENFESMSSGLQNSHRIALMPVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLS 301 (429) Q Consensus 224 ~~~~~~-~~e-~~~~~~~~~~~~~~g~~~~~~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~fgvp~~~l~~~~ 301 (429) +..... +.+ .....-+.-.+.|.+.. .-..++-+++.++....+-++.+..+...+.|+...|+++..++... T Consensus 309 ~~~~~~~~g~~~~~~~fd~~~~~f~~~~-----~~~~~~~~i~~~~~~ir~e~~~~~~~~~l~~i~~~~gls~~tf~~~~ 383 (522) T protein:vir:47 309 QRQYQRPDGTIDFRPRFDVEQNVYMQIG-----GSSMDAGGITDLTSPIRANDYILAISEGLKLFEMQIGVSSGMFTFDG 383 (522) T ss_pred ccCCCCCCcccccccccCcccceEeecC-----CCCCCCCcceeeccccChHHHHHHHHHHHHHHHHHhCCCccccCccc Confidence 221111 100 00000000011121110 00123345666777777888999999999999999999999887654 Q ss_pred ccccccHHHH-------------HHHHHHHHHhHHHHHHHHHHHHhhccchhhcchhhhhhhhhhHhhhhHHHHHHHHHH Q lcl|Aclame:pro 302 KATLNNIEQQ-------------QQQFYTDTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAILRADIKTRYEAYRT 368 (429) Q Consensus 302 ~~~~~n~~~~-------------~~~~~~~~l~P~~~~i~~~l~~~ll~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~ 368 (429) .+ -.++.+. ....++.+|..++..|....+..-+........+.+.+++++-...|.++.++...+ T Consensus 384 ~~-~kTAtEi~s~~~~~~~t~~~~~~~~~~al~~lv~~i~~l~~~~~~~~~~~~~~~~i~v~f~D~i~~D~~~~~~~~~~ 462 (522) T protein:vir:47 384 QG-MKTATEIVSENSDTYQMRSSIVALVEQSIKELCVSMCELGKAVGVYSGEIPELDDISVNLDDGVFTDRHAELDYWAK 462 (522) T ss_pred cc-cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccCCCCCcceeEEEcCCCCCCCHHHHHHHHHH Confidence 43 2333333 345556666666666664433211111122234456666677678899999999999 Q ss_pred HHhCCCCCHHHHHHHh-CCCCCCCcc-ee-eeccccccccccccccCCCCCCCCCCCCCCCCCC Q lcl|Aclame:pro 369 GIQGGFLKPNEARSKE-DLPPEAGGD-RL-LVNGNMLPIDMAGQAYLKGGDTNGEVSKEGNEGN 429 (429) Q Consensus 369 ~~~~g~~t~NE~R~~~-Gl~~~~~gD-~~-~~~~n~~~~~~~~~~~~~~g~~~~~~~~~~~~~n 429 (429) ++.+|+|++-+++.++ |++.-+ .. ++ .+..-..+... .+..--+ .+.+++++++|.- T Consensus 463 ~v~aG~~s~e~~i~~~~g~~eee-a~~el~ri~~E~~~~~~-~~~~~~~--~~~~~~~~~d~~~ 522 (522) T protein:vir:47 463 MVAAGFSTKKRAIGKTLNISGVE-AEKELNAINSELLPMND-AELAIYG--MHDQNEEKADDKG 522 (522) T ss_pred HHhcCCCCHHHHHHhcCCCChHH-HHHHHHHHHHhhccCCC-CCCCCCC--CCCcccccCCCCC Confidence 9999999999987654 664321 11 00 00000000000 0000111 1112122222211 No 157 >protein:vir:1587 Length: 508 # NCBI annotation: minor capsid protein # Family: family:all:898 # MgeID: mge:32 # MgeName: phig1e # Cross-refs: genbank:acc:NP_695169;swissprot:trembl:o03928;genbank:gi:23455800;interpro:IPR006432;uniprot:O03928;genbank:GeneID:955566 Probab=98.86 E-value=8.6e-09 Score=64.81 Aligned_cols=399 Identities=10% Similarity=0.054 Sum_probs=186.7 Q ss_pred Cchhhhhhccccccccc------------ccccCCchHHHH------Hhh-cCCCCcce--ec----hhhhhccHHHHHH Q lcl|Aclame:pro 1 MDSVKKFFNFEKRQTSQ------------VIELNKDDEKLL------EWL-GISPSTIS--VK----GKNALKVATVFAC 55 (429) Q Consensus 1 Mg~~~~~~~~~~~~~~~------------~~~~~~~~~~~~------~~~-~~~~~~~~--~~----~~~a~~~~~v~~~ 55 (429) ||+|+++.+++++.... ....+.+...+. .+. |..+.... .. .+..........+ T Consensus 1 m~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ri~~~~~~y~g~~~~~~~~~~~~~~~~~~~~sln~~~~i 80 (508) T protein:vir:15 1 MGLIQRIKDLFWKGAAATGVTGSLSKITDDPRISIDPDEYVRIQTDLDYYSDKLQYIHYQASDGIKKKRLKNTINMAKTA 80 (508) T ss_pred CChHHHHHHHHHHHHHHhccccchHHhhcccccccCHHHHHHHHHHHHHhcCCCcccccccCCCCccccceeecchHHHH Confidence 99999998877652110 011222222211 122 21111100 00 0011122344556 Q ss_pred HHHHHHhhccCceEEEecCCceeeeeecchhhhhhcccCcCCCCHHHHHHHHHHHHHhhCCeEEEEeeCCCCceEEEEee Q lcl|Aclame:pro 56 IKILSESVSKLPLKIYQEDEYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPI 135 (429) Q Consensus 56 i~~ia~~ia~~~~~~~~~~~~~~~~~~~~~~~~~l~~~PN~~~s~~~~~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~l 135 (429) ++..|+-+..=+..+.-.+++. .+..+..+|. - -......+..+.+.+..|.+++.+..+..+ ..+..+ T Consensus 81 ~~~~A~lv~~e~~~i~v~~~~~----~~e~l~~il~--~---n~f~~~~~~~~e~a~a~G~~~~k~~~d~~~--~~i~~v 149 (508) T protein:vir:15 81 ARRIASVVFNEKAEIHVKDNNE----ADKFLNDVLE--D---NDFKNKFEEALEKGVALGGFAMRPYIDGNH--IKIAWV 149 (508) T ss_pred HHHHHhhhhCCCceEEeCCchH----HHHHHHHHHH--h---ccHHHHHHHHHHHHhhcCceEEEEEEeCCe--eEEEEE Confidence 6666666654444433222110 0011222332 1 223445566678888899999888776433 356666 Q ss_pred CCcceEEE-EcCCcce-----------------eee-------------eeEEEeeccc-----CceEEE---c-----c Q lcl|Aclame:pro 136 DASKVTVY-IDDVGLL-----------------NSK-------------TKMWYVVNTG-----GQQRVL---K-----P 171 (429) Q Consensus 136 ~p~~v~~~-~~~~~~~-----------------~~~-------------~~~~~~~~~~-----g~~~~~---~-----~ 171 (429) +|+.+-+. .+..... .+. .+.+..+... |....+ + + T Consensus 150 ~ad~~~P~~~d~~~~~~~af~~~~~~~~~~~~~~yt~lE~h~~~~~~~~~I~n~ly~~~~~~~lG~~v~l~~~~e~~~l~ 229 (508) T protein:vir:15 150 RADQFYPLQSNTNDISEAAIASRTQRTESNQTKYYTLLEFHQWQDNGSYQITNELYKSDSPDIVGNQVPLSTLPVYKELA 229 (508) T ss_pred cCCeeEEEEEcCCCeEEEEEEEEEEeecCCCceEEEEEEEEEEecCcceEEEEEEEecCCchhcCcccchhhcccccCCC Confidence 77765542 2222110 000 0000011111 111111 0 0 Q ss_pred ----------ceEEEeecCCCC----CcccccCHHHHHHHHHHHHHHHHHHHHHHHHccCCcceEEE---eCCCCC-HHH Q lcl|Aclame:pro 172 ----------EEILHFKNGITL----DGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQ---YVGDLN-EDA 233 (429) Q Consensus 172 ----------~evih~~~~~~~----~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~---~~~~~~-~e~ 233 (429) --..||+.+-+. ....|.|.+..+...++..+........-++. +.+..++. ++.+.. ... T Consensus 230 ~~~~~~g~~~p~f~y~~~~~~N~~~~~splG~S~~~~~~~lid~lD~~~s~~~~e~~~-~~~~i~v~~~~l~~d~~~~~~ 308 (508) T protein:vir:15 230 PQVTISGLQRPLFAYFKTPGANNINIESPLGLGVVDNAKHVLDDINDTHDQFIWEIRL-GQKHIAVQPGMLRFDDEHKPT 308 (508) T ss_pred cceEecCCCcceeEEecCCccccccCCCCcCCchHhhhHHHHHHHHHHHHHHHHHHHh-cccceeechHHhcCCCCCccc Confidence 112455533222 34579999999999998888777777777764 44544442 111111 000 Q ss_pred HHHHHHHHHHHhcccccccceeecCCCceeEecCCChhHHHHHHHHHHHHHHHHHHhcCChhhcCCccccccccHHHH-- Q lcl|Aclame:pro 234 KKVFRENFESMSSGLQNSHRIALMPVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKATLNNIEQQ-- 311 (429) Q Consensus 234 ~~~~~~~~~~~~~g~~~~~~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~fgvp~~~l~~~~~~~~~n~~~~-- 311 (429) .+.- .+.|.+.. .--++|..++.++....+-++.+..+...+.+....|+++..++....+.. ++.+. T Consensus 309 ~~~~----~~~~~~~~-----~~~~~~~~i~~~~~~ir~e~~~~~~~~~l~~~~~~~gls~~~f~~~~~~~~-TAtei~s 378 (508) T protein:vir:15 309 FDTE----QNVYVGVL-----SDDNNGLGVKDMTTPIRTVQYKDAIDHFIKEFEVQIGLSTGTFSYSNDGVK-TATEVVS 378 (508) T ss_pred cCCC----CeeEEecc-----CCCCCCCceeEeecccChHHHHHHHHHHHHHHHHHhCCCchhcccccCccc-cHHHHHH Confidence 0000 01111100 001234557777777677778999999999999999999999886544322 33222 Q ss_pred -----------HHHHHHHHHhHHHHHHHHHHHHhhccchh--------hcchhhhhhhhhhHhhhhHHHHHHHHHHHHhC Q lcl|Aclame:pro 312 -----------QQQFYTDTLQATLTMYEQEMTYKLFLDSE--------LDKGFYSKFNVDAILRADIKTRYEAYRTGIQG 372 (429) Q Consensus 312 -----------~~~~~~~~l~P~~~~i~~~l~~~ll~~~~--------~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~ 372 (429) ....++.+|..+++.|.......-+...+ ....+.+.|++++-...|.++..+...+++.+ T Consensus 379 ~~~~~~~t~~~~~~~~~~al~~lv~~il~l~~~~~~~~~g~~~~~~~~~~~~~~v~v~f~D~i~~d~~~~~~~~~~~v~a 458 (508) T protein:vir:15 379 NNSMTYQTRSSYLTMVEKAIDELCQSIFELANAGALFDDGKPLFTLDSASQPLDIECHFDDGVFVNKDKQLEEDAKVLAI 458 (508) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccccccccCCcceEEEeCCCCCCCHHHHHHHHHHHHhc Confidence 22334444445444444332211011110 11223455666666788999999999999999 Q ss_pred CCCCHHHHHHHh-CCCCCCCcceeeeccccccccccccccCCCCCCCCCCCCCCCCCC Q lcl|Aclame:pro 373 GFLKPNEARSKE-DLPPEAGGDRLLVNGNMLPIDMAGQAYLKGGDTNGEVSKEGNEGN 429 (429) Q Consensus 373 g~~t~NE~R~~~-Gl~~~~~gD~~~~~~n~~~~~~~~~~~~~~g~~~~~~~~~~~~~n 429 (429) |+|+.-+++.+. |++.- ..++- +..+.. +............+..+++|- T Consensus 459 Gi~s~e~~i~~~~g~~de-ea~~e-----l~ri~~--E~~~~~~~~~~~~~~~g~~ge 508 (508) T protein:vir:15 459 GALSKQTFLQRNYGMTDE-QAAEE-----LAKIQS--EAPTDTFEGGRSAILNGGDGE 508 (508) T ss_pred CCCCHHHHHHhcCCCChH-HHHHH-----HHHHHH--hccccCccccccccCCCCCCC Confidence 999999987654 65431 11110 000000 000000000011111111111 No 158 >protein:vir:5839 Length: 533 # NCBI annotation: similar to portal vertex protein of head # Family: family:all:1036 # MgeID: mge:123 # MgeName: RM 378 # Cross-refs: genbank:acc:NP_835625;genbank:gi:30044028 Probab=98.85 E-value=8.9e-09 Score=64.72 Aligned_cols=411 Identities=11% Similarity=0.109 Sum_probs=188.5 Q ss_pred Cchh----------------hhhhccc--cccc-ccccccCCchH-----HHHHhhcCCCCc----ceechhhhhccHHH Q lcl|Aclame:pro 1 MDSV----------------KKFFNFE--KRQT-SQVIELNKDDE-----KLLEWLGISPST----ISVKGKNALKVATV 52 (429) Q Consensus 1 Mg~~----------------~~~~~~~--~~~~-~~~~~~~~~~~-----~~~~~~~~~~~~----~~~~~~~a~~~~~v 52 (429) |--| ++++++. +... +..++.+...+ ....++|+-..+ +....+-|+.+|.| T Consensus 1 ~~~~~~w~~~de~~~~~~~~~~~~~~~~p~~~dG~s~i~~~~~~~~~~~~~~~~~~gg~~~n~~eLI~~YR~ma~~~pEV 80 (533) T protein:vir:58 1 MPSLEKYKKLNEAVNFTNFLSPMYGMGAPHGAGGSSMIPINMYHPFATAGYASRFYGGIEFNRFFLYDMYDRMDYTDPLI 80 (533) T ss_pred CCCcchhhhhhHHHHHHHhhchhhcccCccCCCCCccccCCCCcchhhhhhhhhhhccccccHHHHHHHHHHhhccCcch Confidence 2222 2222221 1111 12222222211 111223321111 11112223567999 Q ss_pred HHHHHHHHHhhcc-----CceEEEecCCceeeeeecchhhhhhcccCcCCCCHHHHHHHHHHHHHhhCCeEEEEeeC-CC Q lcl|Aclame:pro 53 FACIKILSESVSK-----LPLKIYQEDEYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFD-RK 126 (429) Q Consensus 53 ~~~i~~ia~~ia~-----~~~~~~~~~~~~~~~~~~~~~~~~l~~~PN~~~s~~~~~~~~~~~~l~~G~~~~~~~~~-~~ 126 (429) -+||+.|.+.+.- -|+.+...+.+ ....+...+..+ ++...--..+++.|.+.|..|..++.+ .. T Consensus 81 d~AideIvneaiv~d~~~~pV~v~l~~~e-~s~~iK~kI~~l--------ldf~~~~~~~fR~WYVDGriy~Hkiik~~k 151 (533) T protein:vir:58 81 STVLDIIADECTIPNENGNIVDVVTKDIE-LAKAILSYLDYV--------INIEKNAYPIIRNMIKYGDMFLHILEKGSD 151 (533) T ss_pred hhHHHhhhceeeEecCCCceeEeeccccc-ccHHHHHHHHHH--------hcchhhhhHHHHhhhhcceeEEEeccCCcc Confidence 9999999986542 22222211111 111111122222 223333445677788899999987543 44 Q ss_pred CceEEEEeeCCcceEEEEcCCcceeeeeeEEEeec-------ccCceEEEccceEEEeecC-CCCCcccccCHHHHHHHH Q lcl|Aclame:pro 127 GKVQALWPIDASKVTVYIDDVGLLNSKTKMWYVVN-------TGGQQRVLKPEEILHFKNG-ITLDGLVGVPTMEYLKST 198 (429) Q Consensus 127 g~~~~l~~l~p~~v~~~~~~~~~~~~~~~~~~~~~-------~~g~~~~~~~~evih~~~~-~~~~~~~G~s~~~~~~~~ 198 (429) +-..+|.+|+|..|+.++.-... ..+|.+. ..+..+.++++.|+|+... ...+..+++|-|..|.+. T Consensus 152 ~GI~elr~lDPr~i~~vr~~~t~-----~eyyvy~~~~~~~~s~~~~~kI~~daI~y~~SGl~d~~~~~iisyLhkAiKp 226 (533) T protein:vir:58 152 GTIEKFQVVSPYIFSKRYNPETD-----TWYYVITDVYRNVVSGYFNEDIPEEDVIHFSHKIDTNFFPYGRSYLESARAI 226 (533) T ss_pred cchhhheecCCeeeEEEEeeccc-----eEEEeecccccccccCccccccchhheeeeeeccccCCCCceehhhhHHHHH Confidence 55779999999999887654211 1222222 4445577899999999877 344667888999999887 Q ss_pred HHHHHHHHHHHHHHHHccCCcceEEEeCCC-CC----HHHHHHHHHHHHHHhcccccccce----------eecC----- Q lcl|Aclame:pro 199 LENSASADKFINNFYKQGLQVKGLVQYVGD-LN----EDAKKVFRENFESMSSGLQNSHRI----------ALMP----- 258 (429) Q Consensus 199 i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~-~~----~e~~~~~~~~~~~~~~g~~~~~~~----------~vl~----- 258 (429) +....-+....--+--..+.-.-++-++.+ +. ++-...+..++++++-=..+.|.| ..++ T Consensus 227 ~NQLkmiEDAlVIYRisRAPeRRvFYIDVGNlpk~KAeqYl~~im~k~kNklvYDa~TGev~ddrk~m~~~sMlEDyWLp 306 (533) T protein:vir:58 227 WNQLRLMEDALMLYRVVRSVDRRVFYVDVGNVPPDKINEYLTNIAMQYKRDYWVRNNQNQFLGIDNYFSIESILKDYFIP 306 (533) T ss_pred HHHHHHHHHHHHHHhhcCChhheEEEEeecCCCccCHHHHHHHHHHhcccceEEeccCCeEeeccchhhhhhhHhhhccc Confidence 776665555444443334433444444422 22 333444555555554322234444 1221 Q ss_pred -----CCceeEecCCChhHHHHHHHHHHHHHHHHHHhcCChhhcCCcccccccc-HHHHHHHHHHHHHhHHHHHHHHHHH Q lcl|Aclame:pro 259 -----VGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKATLNN-IEQQQQQFYTDTLQATLTMYEQEMT 332 (429) Q Consensus 259 -----~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~fgvp~~~l~~~~~~~~~n-~~~~~~~~~~~~l~P~~~~i~~~l~ 332 (429) .|.+++.|.-. .+.-++-.++..+.+.++++||.+-|+..+....++ +.-.... +...|.-+-..|.+.|. T Consensus 307 RReGgrgTEI~TLpGg--~lgemeDV~YF~kkLy~ALnVP~sRl~~e~~fgr~~eItRDEiK-F~KFI~rLR~rF~~ll~ 383 (533) T protein:vir:58 307 RRGDRRAVEIDILQGS--KVDLAEDVEYMLNRLISALKVPKAFIGYEGDVNAKNTLATQDIK-FNNTIKRIQGFFVEELE 383 (533) T ss_pred ccCCCccceeeecCCC--CCCcHHHHHHHHHHHHHHhCCCeeecCCCCCCccchhhhHHHHH-HHHHHHHHHHHHHHHHh Confidence 36888887643 366668888899999999999999997654432222 1111122 33345666667888887 Q ss_pred Hhhccchhhcc-hhhhhhhhhh----Hhhhh-HHHHHHHHHHH---HhC-----CC--CC-----HHHHHHHhCCCCC-- Q lcl|Aclame:pro 333 YKLFLDSELDK-GFYSKFNVDA----ILRAD-IKTRYEAYRTG---IQG-----GF--LK-----PNEARSKEDLPPE-- 389 (429) Q Consensus 333 ~~ll~~~~~~~-~~~~~fd~~~----l~~~d-~~~~~~~~~~~---~~~-----g~--~t-----~NE~R~~~Gl~~~-- 389 (429) +.|........ .+.+.|..|. +.... +..|...+..+ +.. .+ +| -.|+-+..+..++ T Consensus 384 ~qLilk~iit~eew~~~f~~Dn~f~ElKe~Eil~~Ri~~l~~~dpyvgk~yi~k~ILr~tdei~~q~e~ie~E~~~~~~~ 463 (533) T protein:vir:58 384 RMVRMNKEFADQDFRLVMNRSNSIVEGERFAVIEQRIGIAERLKGWVREDWIYSNILQIPYDLKPQEEVAEAAGGGGLFD 463 (533) T ss_pred cccccccCcchhheeeeeeccchHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHhcCChhhhHHHHHHHHhhcCCCCC Confidence 77655433222 1233333222 11111 12222222211 110 00 12 1112122222221 Q ss_pred -CCcceeeecccc-----ccccccccccCCCCCCCCCCCCCCCCCC Q lcl|Aclame:pro 390 -AGGDRLLVNGNM-----LPIDMAGQAYLKGGDTNGEVSKEGNEGN 429 (429) Q Consensus 390 -~~gD~~~~~~n~-----~~~~~~~~~~~~~g~~~~~~~~~~~~~n 429 (429) ++-+.=..|.-. .|++.+......+ .....++..+++.| T Consensus 464 ~~~~~~e~~~~~~~~~~~~p~~~~~~~~~~~-~~~~~~~~~~~~~~ 508 (533) T protein:vir:58 464 TGGFGEETTPADFLGERGSPIESPRGRTEFD-FGTEGGEELGGELN 508 (533) T ss_pred CCCcccccCCcccCccccCcccCCCChhhHh-cccCCccccccccc Confidence 111111112211 1222111000000 00000111111111 No 159 >protein:vir:4898 Length: 502 # NCBI annotation: gp502 # Family: family:all:125 # MgeID: mge:107 # MgeName: Sfi11 # Cross-refs: genbank:acc:NP_056676;genbank:gi:9635011;genbank:GeneID:1262662 Probab=98.85 E-value=2.8e-08 Score=62.03 Aligned_cols=411 Identities=10% Similarity=0.003 Sum_probs=191.8 Q ss_pred Cchhhhhh--------cccccccccccccCCchHHHHHhhcC-CCCcc----eec---hhhhhccHHHHHHHHHHHHhhc Q lcl|Aclame:pro 1 MDSVKKFF--------NFEKRQTSQVIELNKDDEKLLEWLGI-SPSTI----SVK---GKNALKVATVFACIKILSESVS 64 (429) Q Consensus 1 Mg~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~----~~~---~~~a~~~~~v~~~i~~ia~~ia 64 (429) |..+.... ++..+......+ .-..+.++.-. ..... ... ...-.........++..+..+- T Consensus 31 ~~~~~~~~~~~~~~i~~~i~~h~~~~~~---rl~~l~~yY~g~~~~i~~~~~~~~~~~~~~ki~~n~~k~Ivd~~~~yl~ 107 (502) T protein:vir:48 31 ADNLEELMVNNWELLKNFINHHKLRQAP---RIQELLDYARGENHDVLKSGRRKDNEMADKRAVHNYGRMISKFKTGYLA 107 (502) T ss_pred ccchhhhccccHHHHHHHHHHHHHHHHH---HHHHHHHHhcCCCccccccccccccccccceeecchHHHHHHHHhhhhc Confidence 22222111 100000000000 00001111111 00000 000 0001123556677888888888 Q ss_pred cCceEEEecCCceeeeeecchhhhhhcccCcCCCCHHHHHHHHHHHHHhhCCeEEEEeeCCCCceEEEEeeCCcceEEEE Q lcl|Aclame:pro 65 KLPLKIYQEDEYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVYI 144 (429) Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~PN~~~s~~~~~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~l~p~~v~~~~ 144 (429) +-|+.+...++... ..+...|+ +....-........+..+++.+|.||+++.++.+|.+ .+..++|..+.++. T Consensus 108 g~p~~~~~~d~~~~-----~~~~~~l~-~~~~~N~~~~~~~~~~~~~~~~G~a~~~v~~dedg~~-~i~~~~p~~~~~vy 180 (502) T protein:vir:48 108 GNPIRVEYDDNEDN-----SQNDDAIK-RIGRINDIDTHNRNLIRDLSQTGRAYEVIYRSEYDET-RIKRLSPLETFVIY 180 (502) T ss_pred ccCeeEecCCccch-----hHHHHHHH-HHHhhcCHhHHHHHHHHHHhhcCeEEEEEEeCCCCce-EEEEEcccceEEEE Confidence 88888765443211 23333343 2333345667888899999999999999999888865 57778999988877 Q ss_pred cCCccee-eeeeEEEee-cccCc---eEEEccceEEEeecC----------CCC---------CcccccCHHHHHHHHHH Q lcl|Aclame:pro 145 DDVGLLN-SKTKMWYVV-NTGGQ---QRVLKPEEILHFKNG----------ITL---------DGLVGVPTMEYLKSTLE 200 (429) Q Consensus 145 ~~~~~~~-~~~~~~~~~-~~~g~---~~~~~~~evih~~~~----------~~~---------~~~~G~s~~~~~~~~i~ 200 (429) +...... .....+|.. ...+. ...+++..++++... ++. +...|.|-++.+...++ T Consensus 181 dd~~~~~~~~~ir~~~~~~~~~~~~~~~iyt~~~i~~~~~~~~~~~~~~~~~~~g~vPvv~~~nn~~g~sd~e~v~~liD 260 (502) T protein:vir:48 181 DNSLEDNSIAAVRYYNRGTLQNAKDVVEIYTNQHIYTLDASDSFNEISVTPHAFGTVPITEFLNNADGIGDYETELYLID 260 (502) T ss_pred cCCCCCceEEEEEEEEEeecCCcEEEEEEEeCCeEEEEEeCCceeeccceecCCCccceEEecCCCCCCCchhhhHHHHH Confidence 6432111 111111111 11111 112333333333211 000 13468888888888888 Q ss_pred HHHHHHHHHHHHHHccCCcceEEEeCCCCC-HHHHHHHHHHHHHHhcccccccceeecCCCceeEecCCChhHHHHHHHH Q lcl|Aclame:pro 201 NSASADKFINNFYKQGLQVKGLVQYVGDLN-EDAKKVFRENFESMSSGLQNSHRIALMPVGYQFQPISLNMSDAQFLENT 279 (429) Q Consensus 201 ~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~-~e~~~~~~~~~~~~~~g~~~~~~~~vl~~g~~~~~~~~~~~d~~~~e~~ 279 (429) ....+.....+.++..+.|-.+++...... ++....+++. ...+.. ..+.....+++.++..+........+.... T Consensus 261 a~d~~~S~~~~~~~~~~~~~lv~~g~~~~~~~~~~~~~~~~-~~~~~~--~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~ 337 (502) T protein:vir:48 261 LYDSAESDTANHMSDMADAILAIYGDLALPQGMQASDMKRT-RLMQLK--PPKSADGKEGTVKAEYLTKSYDVSGAEAYK 337 (502) T ss_pred HHHHHHHHHHHHHHHhcCceeeeecCcccccccchhhhhhc-ceeecc--ccccccccccCcceeEeeecCCHHHHHHHH Confidence 887777777777777777766665432222 2222221111 000000 000011123344544444433344456678 Q ss_pred HHHHHHHHHHhcCChhhcCCc-cccccccHH----------HHHHHHHHHHHhHHHHHHHHHHHHhhccchhhcchhhhh Q lcl|Aclame:pro 280 ELTIRQIATAFGIKMHQLNDL-SKATLNNIE----------QQQQQFYTDTLQATLTMYEQEMTYKLFLDSELDKGFYSK 348 (429) Q Consensus 280 ~~~~~~Ia~~fgvp~~~l~~~-~~~~~~n~~----------~~~~~~~~~~l~P~~~~i~~~l~~~ll~~~~~~~~~~~~ 348 (429) +.....|+..-++|....+.. +..++...+ +.....+...+.-+++.+...+...--.......++.+. T Consensus 338 ~~L~~~I~~~s~~p~~~~~~~~~n~Sg~Alk~~~~~l~~k~~~~~~~~~~~l~~~~~li~~~~~~~~~~~~~d~~~i~i~ 417 (502) T protein:vir:48 338 TRLNKDIHVFTNTPDMSDNHFSGNASGEALKYKLFGLDQDRVDTQSQFTQGLKRRYRLAARIGSLVNEFKDFDESRLKIT 417 (502) T ss_pred HHHHHHHHHHhCCCCcCccccccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccceEE Confidence 888899999889987554332 111111111 122244555555555555554443211111111223344 Q ss_pred hhhhhHhhhhHHHHHHHHHHHHhCCCCCHHHHHHHhCCCCCCC--cceeee---ccccccccccccccCCCCCCCCCCCC Q lcl|Aclame:pro 349 FNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEAG--GDRLLV---NGNMLPIDMAGQAYLKGGDTNGEVSK 423 (429) Q Consensus 349 fd~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~Gl~~~~~--gD~~~~---~~n~~~~~~~~~~~~~~g~~~~~~~~ 423 (429) | ...+..|..+.++.+.++ +|+++..-+.+++++-..+. ...+.. .....+..... ....+...++.++. T Consensus 418 f--~~~~p~d~~e~a~~~~kl--~g~iS~et~l~~l~~v~D~~~E~~ri~~E~~~~~~~~~~~~~-~~~~~~~~d~~~e~ 492 (502) T protein:vir:48 418 F--TPNLPKSLYEQVSILNDL--GGQVSQETALSLSGLVENPTEELDKINEESSKIDFKGYPSYF-YDNVGKYTDEVKET 492 (502) T ss_pred e--CCCCCcCHHHHHHHHHHH--hccCcHHHHHHhCCCCCCHHHHHHHHHHHHHhhhhhcccccc-cccccccCCCccCC Confidence 4 556778899999998888 58899888888887643321 111100 00000111000 11111112222223 Q ss_pred CCCCCC Q lcl|Aclame:pro 424 EGNEGN 429 (429) Q Consensus 424 ~~~~~n 429 (429) ..+|.. T Consensus 493 ~~~~~~ 498 (502) T protein:vir:48 493 HTDDFE 498 (502) T ss_pred CCcCcC Confidence 333333 No 160 >protein:vir:38 Length: 496 # NCBI annotation: putative portal protein # Family: family:all:898 # MgeID: mge:2 # MgeName: A118 # Cross-refs: genbank:acc:NP_463464;swissprot:trembl:q9t1c0;genbank:gi:16798786;uniprot:Q9T1C0;genbank:GeneID:922383 Probab=98.85 E-value=1.2e-08 Score=63.91 Aligned_cols=399 Identities=13% Similarity=0.095 Sum_probs=179.4 Q ss_pred hhhhhhc----ccccc----c----ccccccCCch---HHHH---HhhcCCCCcce-----ec----hhhhhccHHHHHH Q lcl|Aclame:pro 3 SVKKFFN----FEKRQ----T----SQVIELNKDD---EKLL---EWLGISPSTIS-----VK----GKNALKVATVFAC 55 (429) Q Consensus 3 ~~~~~~~----~~~~~----~----~~~~~~~~~~---~~~~---~~~~~~~~~~~-----~~----~~~a~~~~~v~~~ 55 (429) .|++++. ++++- . ........+. ..+. .+.......+. .. ...-+.......+ T Consensus 1 m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~yy~g~~~~~~~~~~~~~~~~~~~~~~~~n~~k~i 80 (496) T protein:vir:38 1 MINQIIAGVKGVMRRMGLLKALKDVKDHKKVNANDEDYKYIDMWKRLYQGHYAEWHNLNYEHNGNPVNRRQLSMNLPKVT 80 (496) T ss_pred ChhHHHHHHHHHHHHhccchhhHHHHhcCCCcCCHHHHHHHHHHHHHhcCCCchhhcchhccCCCccccceeecchHHHH Confidence 2222221 11110 0 0001111111 1111 12211111000 00 0011223455667 Q ss_pred HHHHHHhhccCceEEEecCCceeeeeecchhhhhhcccCcCCCCHHHHHHHHHHHHHhhCCeEEEEeeCCCCceEEEEee Q lcl|Aclame:pro 56 IKILSESVSKLPLKIYQEDEYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPI 135 (429) Q Consensus 56 i~~ia~~ia~~~~~~~~~~~~~~~~~~~~~~~~~l~~~PN~~~s~~~~~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~l 135 (429) ++..|+.+.+-|..+-..++ .....|+ +-...-........++.+.+..|.+|+.+..+.+|.+ .+-++ T Consensus 81 ~~~~a~~l~~~p~~i~~~d~---------~~~e~l~-~~~~~n~f~~~~~~~~~~a~~~G~~~~~~~~D~~~~~-~i~~v 149 (496) T protein:vir:38 81 AKYMSKLLFNEKVKINIDDK---------AAEEFVL-NVLKTNGFTKNMERYIEYGEAMGGFVIKVYHDGNKNV-KVSFA 149 (496) T ss_pred HHHHhhhhhCCcceEeeCCh---------HHHHHHH-HHHhccCHHHHHHHHHHHHhhhCcEEEEEEEcCCCcE-EEEEE Confidence 78888888776666543221 1222222 1112234566677888899999999999999887765 56777 Q ss_pred CCcceEEEEcCCcceee-ee--------e-----------------EEEeecc-c----CceEEE--------------- Q lcl|Aclame:pro 136 DASKVTVYIDDVGLLNS-KT--------K-----------------MWYVVNT-G----GQQRVL--------------- 169 (429) Q Consensus 136 ~p~~v~~~~~~~~~~~~-~~--------~-----------------~~~~~~~-~----g~~~~~--------------- 169 (429) +|..+-+...+...... .. . .+..+.. + |..+.+ T Consensus 150 ~~~~~~P~~~~~~~~~~~~f~~~~~~~~~~y~~le~h~~~~~~~~I~~~~y~~~~~~~~g~~v~~~~~~~~~~~~~~~~~ 229 (496) T protein:vir:38 150 TADCMYPLSNDSENVDECVIANSFHKNNKYYTLLEWNEWQGDVYTVTTELYQSDDPNELGTKVSLTLLFDDIEPVVPLPD 229 (496) T ss_pred cccceEEEEecCCcEEEEEEEEEEEeCCeEEEEEEEEEEeCceEEEEEEEEecCCccccCccccccccccccccceeecC Confidence 77777654333221100 00 0 0000000 0 111100 Q ss_pred -ccceEEEeecCC----CCCcccccCHHHHHHHHHHHHHHHHHHHHHHHHccCCcceEEE-----eCCCCCHHHHHHHHH Q lcl|Aclame:pro 170 -KPEEILHFKNGI----TLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQ-----YVGDLNEDAKKVFRE 239 (429) Q Consensus 170 -~~~evih~~~~~----~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~-----~~~~~~~e~~~~~~~ 239 (429) +.--+.|++.+- ......|.|.+.-+...++..........+-++.+ .+..++. ...+...+....+.. T Consensus 230 ~~~~~f~~~~~~~~N~~~~~~p~G~Sd~~~~~~lid~ld~~~s~~~~~~~~~-~~~i~v~~~~l~~~~~~~g~~~~~~~~ 308 (496) T protein:vir:38 230 FTRPTFIYIKPNIANNKNLTSPLGISVYANALDTLKTLDLMFDSYYQEFKLG-KKKVLVPSSFVKTAVNLDGSTTQYFDS 308 (496) T ss_pred CCcceEEEecCCcccccccCCcCCCchHhhHHHHHHHHHHHHHHHHHHHhhc-ccceecchHHhhccCCCCCccccCCCC Confidence 011133444321 22345799999999888887777766666666653 4443331 011111000000000 Q ss_pred HHHHHhcccccccceeecCCCceeEecCCChhHHHHHHHHHHHHHHHHHHhcCChhhcCCccccccccHHHH-------- Q lcl|Aclame:pro 240 NFESMSSGLQNSHRIALMPVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKATLNNIEQQ-------- 311 (429) Q Consensus 240 ~~~~~~~g~~~~~~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~fgvp~~~l~~~~~~~~~n~~~~-------- 311 (429) -.+.+. .....-.+++..++.++.....-++.+..+....+++...|+|+..++....+.. +..+. T Consensus 309 -~~~~~~----~~~~~~~~~~~~i~~~~~~i~~e~~~~~l~~~l~~i~~~~g~~~~~f~~~~~g~~-tAtei~~~~~~l~ 382 (496) T protein:vir:38 309 -TDEAFF----LYQGDQDDNGKAIKDISVEIRSTEFIESINAMLRIYAMQVGLSAGTFTFDENGLK-TATEVVSEKSETY 382 (496) T ss_pred -ccceEE----EeecCCCcccccceeeccccCHHHHHHHHHHHHHHHHHhhCCChhhcCCCccccc-hHHHHHHHHHHHH Confidence 000000 0000111233456666666556668888999999999999999999986543321 22221 Q ss_pred -----HHHHHHHHHhHHHHHHHHHHHHhhccchhhcchhhhhhhhhhHhhhhHHHHHHHHHHHHhCCCCCHHHHHHHh-C Q lcl|Aclame:pro 312 -----QQQFYTDTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKE-D 385 (429) Q Consensus 312 -----~~~~~~~~l~P~~~~i~~~l~~~ll~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~-G 385 (429) ....++.+|..+++.+....+...........+..+.|.++.-...|..+.++.+.+++.+|+|+.-.++..+ | T Consensus 383 ~~~~~~~~~~~~~l~~l~~~il~~~~~~~~~~g~~~~~~~i~v~f~d~i~~d~~~~~~~~~~~~~~GiiS~et~l~~~~~ 462 (496) T protein:vir:38 383 QTKNSHSQLIEQGIKEMIVSILEVGKFIEAYSGEVVELDTITVDFDDSIAQDEDTTINRYTNAKNQGMIPLKIALQRAWN 462 (496) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCccceEEEeCCCCCCCHHHHHHHHHHHHhcCCCCHHHHHHhcCC Confidence 1223334455554444432221111111112233455555555778889999999999999999988887654 5 Q ss_pred CCCCCCcceeeeccccccccccccccCCCCCCCCCCCCCCCCCC Q lcl|Aclame:pro 386 LPPEAGGDRLLVNGNMLPIDMAGQAYLKGGDTNGEVSKEGNEGN 429 (429) Q Consensus 386 l~~~~~gD~~~~~~n~~~~~~~~~~~~~~g~~~~~~~~~~~~~n 429 (429) .+. +...+-+ ..+..-.....+..+.. ..++|.. T Consensus 463 ~~d-~ea~~el-----~ri~~E~~~~~~~~d~~----~~~~~~e 496 (496) T protein:vir:38 463 ITE-AEADEWA-----EMLAKEKQAEMPNNDMN----GIFGEEE 496 (496) T ss_pred CCh-HHHHHHH-----HHHHHhhhccCcccccc----CCCCCCC Confidence 432 1111110 00000000000000000 0000000 No 161 >protein:vir:2341 Length: 488 # NCBI annotation: gp11 # Family: family:all:524 # MgeID: mge:51 # MgeName: Bxb1 # Cross-refs: genbank:acc:NP_075278;genbank:gi:12657865;genbank:GeneID:920078 Probab=98.85 E-value=3.7e-09 Score=66.81 Aligned_cols=399 Identities=10% Similarity=0.029 Sum_probs=164.6 Q ss_pred CchhhhhhcccccccccccccCCchHHHHHhhcCCCC----cceechh---hhhccHHHHHHHHHHHHhhccCceEEEec Q lcl|Aclame:pro 1 MDSVKKFFNFEKRQTSQVIELNKDDEKLLEWLGISPS----TISVKGK---NALKVATVFACIKILSESVSKLPLKIYQE 73 (429) Q Consensus 1 Mg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~---~a~~~~~v~~~i~~ia~~ia~~~~~~~~~ 73 (429) .-+++.+........... ..+-++.-.... ...+..+ .-........+|+.+++.+---.|.+-.. T Consensus 10 ~~~i~~L~~~~~~~~~r~-------~~~~~Yy~g~~~i~~~~~~~~~~~~~~~~~~n~~~~ivd~~a~~l~~~Gf~~~~~ 82 (488) T protein:vir:23 10 EKLRDQLLDAFENKQNEL-------KSSKAYYDAERRPDAIGLAVPLDMRKYLAHVGYPRTYVDAIAERQELEGFRIPSA 82 (488) T ss_pred HHHHHHHHHHHHHHHHHH-------HHHHHHHhcccchhhcCcccchhhhhhhhhcchHHHHHHHHHHhhhccceeccCC Confidence 333333322111110000 000000000000 0001100 00123344456666665443333433221 Q ss_pred CCc----eeeeeecchhhhhhcccCcCCCCHHHHHHHHHHHHHhhCCeEEEEeeCC--------CCceEEEEeeCCcceE Q lcl|Aclame:pro 74 DEY----GIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDR--------KGKVQALWPIDASKVT 141 (429) Q Consensus 74 ~~~----~~~~~~~~~~~~~l~~~PN~~~s~~~~~~~~~~~~l~~G~~~~~~~~~~--------~g~~~~l~~l~p~~v~ 141 (429) .+. +........+..++. - -........+..+++.+|.||+++..+. .|. ..+.+++|..+. T Consensus 83 ~~~~~~~~~d~~~~~~l~~i~~--~---N~~~~~~~~~~~~a~i~G~a~~~v~~~~~~~~~~~~~~~-~~i~~~~p~~~~ 156 (488) T protein:vir:23 83 NGEEPESGGENDPASELWDWWQ--A---NNLDIEATLGHTDALIYGTAYITISMPDPEVDFDVDPEV-PLIRVEPPTALY 156 (488) T ss_pred cccccccccchhHHHHHHHHHH--h---cChhHHHHHHHHHHhhcCceEEEEecCCcccccCCCCCc-ceEEEeccceeE Confidence 110 001111122333332 1 2456677788899999999998886543 222 246677888887 Q ss_pred EEEcCCcceeeeeeEEEeecccCceE---EEc-------------------------cceEEEeecCCCCCcccccCHHH Q lcl|Aclame:pro 142 VYIDDVGLLNSKTKMWYVVNTGGQQR---VLK-------------------------PEEILHFKNGITLDGLVGVPTME 193 (429) Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~g~~~---~~~-------------------------~~evih~~~~~~~~~~~G~s~~~ 193 (429) +.++...........++....++... .+. .=.|++|++.......+|.|-+. T Consensus 157 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~h~~g~vPvv~f~n~~~~~~~~G~s~i~ 236 (488) T protein:vir:23 157 AEVDPRTRKVLYAIRAIYGADGNEIVSATLYLPDTTMTWLRAEGEWEAPTSTPHGLEMVPVIPISNRTRLSDLYGTSEIS 236 (488) T ss_pred EEEecCCCceEEEEEEEEecCCCcEEEEEEEecCcEEEEEecCCceEeccccccCCCCcceEEeccccccCCcCCccchh Confidence 77664211111111111111111100 111 11267776555555667888664 Q ss_pred H-HHHHHHHHHHHHHHHHHHHHccCCcceEEEeCCCCCHHHHH--HHHHHHHHHhcccccccceeecCCC--ceeEecCC Q lcl|Aclame:pro 194 Y-LKSTLENSASADKFINNFYKQGLQVKGLVQYVGDLNEDAKK--VFRENFESMSSGLQNSHRIALMPVG--YQFQPISL 268 (429) Q Consensus 194 ~-~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~~e~~~--~~~~~~~~~~~g~~~~~~~~vl~~g--~~~~~~~~ 268 (429) . ....++.............+-.+.|..++.- ....+...+ .-...|+. ..+.++.+++| .++.+++. T Consensus 237 ~~v~~l~Da~~~~~s~~~~~~~~~a~p~~~i~G-~~~~~~~~~~~~~~~~~~~------~~~~v~~~~~g~~~~~~q~~~ 309 (488) T protein:vir:23 237 PELRSVTDAAAQILMNMQGTANLMAIPQRLIFG-AKPEELGINAETGQRMFDA------YMARILAFEGGEGAHAEQFSA 309 (488) T ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhC-CCcccccccccccchhhhh------hhhhhccCCCCCCceeEecCC Confidence 2 2333333333333333333333333333321 001111000 00111111 12346666655 56666655 Q ss_pred ChhHHHHHHHHHHHHHHHHHHhcCChhhcCCccccccccHHH---H----------HHHHHHHHHhHHHHHHHHHHHHhh Q lcl|Aclame:pro 269 NMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKATLNNIEQ---Q----------QQQFYTDTLQATLTMYEQEMTYKL 335 (429) Q Consensus 269 ~~~d~~~~e~~~~~~~~Ia~~fgvp~~~l~~~~~~~~~n~~~---~----------~~~~~~~~l~P~~~~i~~~l~~~l 335 (429) +..+ .+++..+..+.+|+..-++|+..+++...+ .++.++ . ....+...+.-+++.+....+..- T Consensus 310 ~~~~-~~~~~l~~~i~~~~~~~~~p~~~~g~~~~n-~~Sg~Al~~~~~~l~~k~~~~~~~f~~~l~~~~~l~~~~~~~~~ 387 (488) T protein:vir:23 310 AELR-NFVDALDALDRKAASYSGLPPQYLSSSSDN-PASAEAIKAAESRLVKKVERKNKIFGGAWEQAMRLAYKMVKGGD 387 (488) T ss_pred CChH-HHHHHHHHHHHHHhcccCCCHHHhccccCc-chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC Confidence 4433 378889999999999999999998764321 111111 1 122222233333333322111100 Q ss_pred ccchhhcchhhhhhhhhhHhhhhHHHHHHHHHHHHhCC--CCCHHHHHHHhCCCCCC--Ccceee----ec--ccccccc Q lcl|Aclame:pro 336 FLDSELDKGFYSKFNVDAILRADIKTRYEAYRTGIQGG--FLKPNEARSKEDLPPEA--GGDRLL----VN--GNMLPID 405 (429) Q Consensus 336 l~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g--~~t~NE~R~~~Gl~~~~--~gD~~~----~~--~n~~~~~ 405 (429) .. ....++.+.| ..-...+..+.++.+.+++++| +++..-+++++|+-+.+ ..+... .. ..+..+. T Consensus 388 -~~-~~~~~i~v~f--~~~~~~s~~~~ada~~kl~~~g~~~~s~et~~~~l~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 463 (488) T protein:vir:23 388 -IP-TEYYRMETVW--RDPSTPTYAAKADAAAKLFANGAGLIPRERGWVDMGYTIVEREQMRQWLEQDQKQGLGLIGSLY 463 (488) T ss_pred -cc-hhhccceEEe--cCCCCCCHHHHHHHHHHHHhcccccCCHHHHHHhCCCCchHHHHHHHHHHHHHHHHHHHHHHHh Confidence 00 0112223333 3445667888888899998876 78888899999986543 111110 00 0000010 Q ss_pred cccc-----ccCCCCCCCCCCCCCC Q lcl|Aclame:pro 406 MAGQ-----AYLKGGDTNGEVSKEG 425 (429) Q Consensus 406 ~~~~-----~~~~~g~~~~~~~~~~ 425 (429) .... +..+.|+...+++..+ T Consensus 464 ~~~~~~~~~~~~~~~~~~~~e~~~a 488 (488) T protein:vir:23 464 GASTPEGKPGEAPVGEPPAPEPDAA 488 (488) T ss_pred ccCCCcccCCCCCCCCCCCCCCCCC Confidence 0000 1111122222222222 No 162 >protein:vir:94101 Length: 474 # NCBI annotation: ORF007 # Family: family:all:125 # MgeID: mge:1494 # MgeName: 96 # Cross-refs: genbank:acc:YP_240229;genbank:gi:66395892;genbank:GeneID:5133270 Probab=98.80 E-value=4.3e-08 Score=60.99 Aligned_cols=402 Identities=10% Similarity=0.061 Sum_probs=191.4 Q ss_pred Cchhhh-------hhccccccccc--cccc--CCchHHHHHhh-cCCCCcceechhhhhccHHHHHHHHHHHHhhccCce Q lcl|Aclame:pro 1 MDSVKK-------FFNFEKRQTSQ--VIEL--NKDDEKLLEWL-GISPSTISVKGKNALKVATVFACIKILSESVSKLPL 68 (429) Q Consensus 1 Mg~~~~-------~~~~~~~~~~~--~~~~--~~~~~~~~~~~-~~~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~ 68 (429) -.++++ +....+.-+.. .... ........... +.........+..=+.++....+|+..+..+-+-|+ T Consensus 21 ~~~i~~~~~~~~r~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~n~~~~ivd~~~~yl~g~pv 100 (474) T protein:vir:94 21 EALIESHKDDRERMVNLYNRYKTHIDYVPIFKRRPIEEKEDFETGGNVRRLDVSVNNKLNNSFDSEIVDTRVGYLHGVPV 100 (474) T ss_pred HHHHHHhhhhhHHHHHHHHHHhhhcchhhhhcchhhhhhhhhhhcccccccccCcccccccchHHHHHHhHhhheeccce Confidence 111111 11000000000 0000 00000000000 000000000000001245666778888888888888 Q ss_pred EEEecCCceeeeeecchhhhhhcccCcCCCCHHHHHHHHHHHHHhhCCeEEEEeeCCCCceEEEEeeCCcceEEEEcCCc Q lcl|Aclame:pro 69 KIYQEDEYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVYIDDVG 148 (429) Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~l~~~PN~~~s~~~~~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~l~p~~v~~~~~~~~ 148 (429) .+--.++..... .+...|. +-............+..+++.+|.||.++..+.+|.+ .+..++|..+.++.++.. T Consensus 101 ~~~~~~~~~~~e----~~~~~l~-~~~~~n~~~~~~~~~~~~~~~~G~a~~~~~~d~~~~~-~~~~i~p~~~~~v~d~~~ 174 (474) T protein:vir:94 101 TYDLDENAEKNE----KLKKFIT-NFAIRNSVDDEDSEIGKMAAICGYGARLAYIDTNGDI-RIKNIDPYNVIFVGDNIL 174 (474) T ss_pred eEeeCCCCcchH----HHHHHHH-HHHhhcCHhHHHHHHHHHHhhcCeEEEEEEeCCCCee-EEEEEcccceEEEEcCCC Confidence 775433222111 1222222 1222234566777888999999999999988888865 677888888877776544 Q ss_pred ceeeeeeEEEeecc-cCce----EEEccceEEEeecC------------CCC---------CcccccCHHHHHHHHHHHH Q lcl|Aclame:pro 149 LLNSKTKMWYVVNT-GGQQ----RVLKPEEILHFKNG------------ITL---------DGLVGVPTMEYLKSTLENS 202 (429) Q Consensus 149 ~~~~~~~~~~~~~~-~g~~----~~~~~~evih~~~~------------~~~---------~~~~G~s~~~~~~~~i~~~ 202 (429) ........++.... ++.. ..+++..+.+++.. ++. +...|.|-++.+...++.. T Consensus 175 ~~~~~i~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~g~vPvv~~~n~~~g~sd~e~v~~liDa~ 254 (474) T protein:vir:94 175 EPTYSLRYFYEKDDDNGTDYVYAEFYDNAYYYVFRGEGIDALQEVGRYEHLFDYNPLFGVPNNKEMIGDAEKVIHLIDAY 254 (474) T ss_pred ceEEEEEEEEEeeCCCceEEEEEEEEcCceEEEEeecCCCcccccccccCCCCccceEEecCCCCCCCchHHHHHHHHHH Confidence 32221111111111 1110 11122222222210 000 1235778788887777777 Q ss_pred HHHHHHHHHHHHccCCcceEEEeCCCCCHHHHHHHHHHHHHHhcccccccceeecCCCceeEecCCChhHHHHHHHHHHH Q lcl|Aclame:pro 203 ASADKFINNFYKQGLQVKGLVQYVGDLNEDAKKVFRENFESMSSGLQNSHRIALMPVGYQFQPISLNMSDAQFLENTELT 282 (429) Q Consensus 203 ~~~~~~~~~~~~ng~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~g~~~~~~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~ 282 (429) ..+.....+.++..+.|-.+++- ...+++.....+ ..+.+.+.+++.++..+........+.+..+.. T Consensus 255 d~~~S~~~~~~~~~~~~~l~i~g-~~~~~~~~~~~~-----------~~~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~l 322 (474) T protein:vir:94 255 DLTMSDASSEISQTRLAYLVLRG-MGMSEEMIQETQ-----------KSGAFELFDKDMDVKYLTKDVNDTMIENHLDRI 322 (474) T ss_pred HHHHHHHHHHHHHhhcchhhhcc-CCCCchhhhhhh-----------hcceeEecCCCCceeEEeccCCHHHHHHHHHHH Confidence 76666666666666666555542 233333322211 124455566666666555444445567788888 Q ss_pred HHHHHHHhcCChhhcCCc-cccccccHH----------HHHHHHHHHHHhHHHHHHHHHHHHhhccc-hhhcchhhhhhh Q lcl|Aclame:pro 283 IRQIATAFGIKMHQLNDL-SKATLNNIE----------QQQQQFYTDTLQATLTMYEQEMTYKLFLD-SELDKGFYSKFN 350 (429) Q Consensus 283 ~~~Ia~~fgvp~~~l~~~-~~~~~~n~~----------~~~~~~~~~~l~P~~~~i~~~l~~~ll~~-~~~~~~~~~~fd 350 (429) ...|...-++|....... +..++...+ ......+..++.-+++.|...+..+-... ..... .+.+. T Consensus 323 ~~~I~~~s~~p~~~~~~~~~n~Sg~Al~~~~~~l~~k~~~~~~~~~~~l~~~~~li~~~l~~~~~~~~~~~~~--~i~~~ 400 (474) T protein:vir:94 323 EKNIMRFAKSVNFNSDEFNGNVPIIGMKLKLMALENKCMTFERKMTAMLRYQFKVILSALKRKGYNLDDDSYL--NLIFK 400 (474) T ss_pred HHHHHHHhCCcccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCccccc--cceEE Confidence 899999988886544322 212221111 12233455555555556555554331111 11112 23444 Q ss_pred hhhHhhhhHHHHHHHHHHHHhCCCCCHHHHHHHhCCCCCCC--cceeeeccccccccccccccCCCCCCCCCCCCCCCC Q lcl|Aclame:pro 351 VDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEAG--GDRLLVNGNMLPIDMAGQAYLKGGDTNGEVSKEGNE 427 (429) Q Consensus 351 ~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~Gl~~~~~--gD~~~~~~n~~~~~~~~~~~~~~g~~~~~~~~~~~~ 427 (429) +..-+..|..+.++.+.++ .|+++..-+.+++++-+.+. .+.+..- ...... ......+++.+++++++.+| T Consensus 401 f~~~~p~d~~e~a~~~~kl--~g~iS~et~~~~l~~v~d~~~E~eri~~E-~~e~~~--~~~~~~~~~~~~~~~~~~s~ 474 (474) T protein:vir:94 401 FTRNIPVNKLEESQVLINL--KGQVSERTRLGQSQLVDDVDYELDEMEKE-SLEFND--KLPDIDEGDANDKSQNNQSE 474 (474) T ss_pred eCCCCCCCHHHHHHHHHHH--hccCchHHHHHhCCCCCCHHHHHHHHHHH-HHHHHh--hcccccCCCcCCCCccccCC Confidence 4555778899999998887 48899988999887644321 1111000 000011 11223344455554444444 No 163 >protein:vir:105889 Length: 474 # NCBI annotation: portal protein # Family: family:all:125 # MgeID: mge:1514 # MgeName: phiETA3 # Cross-refs: genbank:acc:YP_001004371;genbank:gi:122891826;genbank:GeneID:4712360 Probab=98.80 E-value=4.3e-08 Score=60.99 Aligned_cols=402 Identities=10% Similarity=0.061 Sum_probs=191.4 Q ss_pred Cchhhh-------hhccccccccc--cccc--CCchHHHHHhh-cCCCCcceechhhhhccHHHHHHHHHHHHhhccCce Q lcl|Aclame:pro 1 MDSVKK-------FFNFEKRQTSQ--VIEL--NKDDEKLLEWL-GISPSTISVKGKNALKVATVFACIKILSESVSKLPL 68 (429) Q Consensus 1 Mg~~~~-------~~~~~~~~~~~--~~~~--~~~~~~~~~~~-~~~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~ 68 (429) -.++++ +....+.-+.. .... ........... +.........+..=+.++....+|+..+..+-+-|+ T Consensus 21 ~~~i~~~~~~~~r~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~n~~~~ivd~~~~yl~g~pv 100 (474) T protein:vir:10 21 EALIESHKDDRERMVNLYNRYKTHIDYVPIFKRRPIEEKEDFETGGNVRRLDVSVNNKLNNSFDSEIVDTRVGYLHGVPV 100 (474) T ss_pred HHHHHHhhhhhHHHHHHHHHHhhhcchhhhhcchhhhhhhhhhhcccccccccCcccccccchHHHHHHhHhhheeccce Confidence 111111 11000000000 0000 00000000000 000000000000001245666778888888888888 Q ss_pred EEEecCCceeeeeecchhhhhhcccCcCCCCHHHHHHHHHHHHHhhCCeEEEEeeCCCCceEEEEeeCCcceEEEEcCCc Q lcl|Aclame:pro 69 KIYQEDEYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVYIDDVG 148 (429) Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~l~~~PN~~~s~~~~~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~l~p~~v~~~~~~~~ 148 (429) .+--.++..... .+...|. +-............+..+++.+|.||.++..+.+|.+ .+..++|..+.++.++.. T Consensus 101 ~~~~~~~~~~~e----~~~~~l~-~~~~~n~~~~~~~~~~~~~~~~G~a~~~~~~d~~~~~-~~~~i~p~~~~~v~d~~~ 174 (474) T protein:vir:10 101 TYDLDENAEKNE----KLKKFIT-NFAIRNSVDDEDSEIGKMAAICGYGARLAYIDTNGDI-RIKNIDPYNVIFVGDNIL 174 (474) T ss_pred eEeeCCCCcchH----HHHHHHH-HHHhhcCHhHHHHHHHHHHhhcCeEEEEEEeCCCCee-EEEEEcccceEEEEcCCC Confidence 775433222111 1222222 1222234566777888999999999999988888865 677888888877776544 Q ss_pred ceeeeeeEEEeecc-cCce----EEEccceEEEeecC------------CCC---------CcccccCHHHHHHHHHHHH Q lcl|Aclame:pro 149 LLNSKTKMWYVVNT-GGQQ----RVLKPEEILHFKNG------------ITL---------DGLVGVPTMEYLKSTLENS 202 (429) Q Consensus 149 ~~~~~~~~~~~~~~-~g~~----~~~~~~evih~~~~------------~~~---------~~~~G~s~~~~~~~~i~~~ 202 (429) ........++.... ++.. ..+++..+.+++.. ++. +...|.|-++.+...++.. T Consensus 175 ~~~~~i~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~g~vPvv~~~n~~~g~sd~e~v~~liDa~ 254 (474) T protein:vir:10 175 EPTYSLRYFYEKDDDNGTDYVYAEFYDNAYYYVFRGEGIDALQEVGRYEHLFDYNPLFGVPNNKEMIGDAEKVIHLIDAY 254 (474) T ss_pred ceEEEEEEEEEeeCCCceEEEEEEEEcCceEEEEeecCCCcccccccccCCCCccceEEecCCCCCCCchHHHHHHHHHH Confidence 32221111111111 1110 11122222222210 000 1235778788887777777 Q ss_pred HHHHHHHHHHHHccCCcceEEEeCCCCCHHHHHHHHHHHHHHhcccccccceeecCCCceeEecCCChhHHHHHHHHHHH Q lcl|Aclame:pro 203 ASADKFINNFYKQGLQVKGLVQYVGDLNEDAKKVFRENFESMSSGLQNSHRIALMPVGYQFQPISLNMSDAQFLENTELT 282 (429) Q Consensus 203 ~~~~~~~~~~~~ng~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~g~~~~~~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~ 282 (429) ..+.....+.++..+.|-.+++- ...+++.....+ ..+.+.+.+++.++..+........+.+..+.. T Consensus 255 d~~~S~~~~~~~~~~~~~l~i~g-~~~~~~~~~~~~-----------~~~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~l 322 (474) T protein:vir:10 255 DLTMSDASSEISQTRLAYLVLRG-MGMSEEMIQETQ-----------KSGAFELFDKDMDVKYLTKDVNDTMIENHLDRI 322 (474) T ss_pred HHHHHHHHHHHHHhhcchhhhcc-CCCCchhhhhhh-----------hcceeEecCCCCceeEEeccCCHHHHHHHHHHH Confidence 76666666666666666555542 233333322211 124455566666666555444445567788888 Q ss_pred HHHHHHHhcCChhhcCCc-cccccccHH----------HHHHHHHHHHHhHHHHHHHHHHHHhhccc-hhhcchhhhhhh Q lcl|Aclame:pro 283 IRQIATAFGIKMHQLNDL-SKATLNNIE----------QQQQQFYTDTLQATLTMYEQEMTYKLFLD-SELDKGFYSKFN 350 (429) Q Consensus 283 ~~~Ia~~fgvp~~~l~~~-~~~~~~n~~----------~~~~~~~~~~l~P~~~~i~~~l~~~ll~~-~~~~~~~~~~fd 350 (429) ...|...-++|....... +..++...+ ......+..++.-+++.|...+..+-... ..... .+.+. T Consensus 323 ~~~I~~~s~~p~~~~~~~~~n~Sg~Al~~~~~~l~~k~~~~~~~~~~~l~~~~~li~~~l~~~~~~~~~~~~~--~i~~~ 400 (474) T protein:vir:10 323 EKNIMRFAKSVNFNSDEFNGNVPIIGMKLKLMALENKCMTFERKMTAMLRYQFKVILSALKRKGYNLDDDSYL--NLIFK 400 (474) T ss_pred HHHHHHHhCCcccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCccccc--cceEE Confidence 899999988886544322 212221111 12233455555555556555554331111 11112 23444 Q ss_pred hhhHhhhhHHHHHHHHHHHHhCCCCCHHHHHHHhCCCCCCC--cceeeeccccccccccccccCCCCCCCCCCCCCCCC Q lcl|Aclame:pro 351 VDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEAG--GDRLLVNGNMLPIDMAGQAYLKGGDTNGEVSKEGNE 427 (429) Q Consensus 351 ~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~Gl~~~~~--gD~~~~~~n~~~~~~~~~~~~~~g~~~~~~~~~~~~ 427 (429) +..-+..|..+.++.+.++ .|+++..-+.+++++-+.+. .+.+..- ...... ......+++.+++++++.+| T Consensus 401 f~~~~p~d~~e~a~~~~kl--~g~iS~et~~~~l~~v~d~~~E~eri~~E-~~e~~~--~~~~~~~~~~~~~~~~~~s~ 474 (474) T protein:vir:10 401 FTRNIPVNKLEESQVLINL--KGQVSERTRLGQSQLVDDVDYELDEMEKE-SLEFND--KLPDIDEGDANDKSQNNQSE 474 (474) T ss_pred eCCCCCCCHHHHHHHHHHH--hccCchHHHHHhCCCCCCHHHHHHHHHHH-HHHHHh--hcccccCCCcCCCCccccCC Confidence 4555778899999998887 48899988999887644321 1111000 000011 11223344455554444444 No 164 >protein:vir:7987 Length: 456 # NCBI annotation: gp3 # Family: family:all:5096 # MgeID: mge:151 # MgeName: Che8 # Cross-refs: genbank:acc:NP_817341;genbank:gi:29565769;genbank:GeneID:1258964 Probab=98.79 E-value=1.5e-09 Score=68.98 Aligned_cols=384 Identities=11% Similarity=0.051 Sum_probs=172.8 Q ss_pred CchhhhhhcccccccccccccCCchHHHHHhhcCCCCc--ce--ec--h---hhhhccHHHHHHHHHHHHhhccCceEEE Q lcl|Aclame:pro 1 MDSVKKFFNFEKRQTSQVIELNKDDEKLLEWLGISPST--IS--VK--G---KNALKVATVFACIKILSESVSKLPLKIY 71 (429) Q Consensus 1 Mg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~--~~--~---~~a~~~~~v~~~i~~ia~~ia~~~~~~~ 71 (429) +-+++++.......... ...+-++.-..... .. .. . .....+.....+|+..++.+-.-||.+. T Consensus 7 ~~~~~~l~~~~~~~~~r-------~~~l~~Yy~g~~~i~~~~~~~~~~~~~~~~~~~~n~~~~ivd~~~~~l~~~g~~~~ 79 (456) T protein:vir:79 7 AEWLPVLTKRIDDGMSR-------VRLLARYSNGDAPLPELTRNTSAAWRSFQREARTNWGLMVRDSVADRIIPNGITVG 79 (456) T ss_pred HHHHHHHHHHHHHHHHH-------HHHHHHHHhccCChhhcCcccChhhchhhhhhhcchHHHHHHHHHhhhccCCeecC Confidence 22332222211100000 00000110000000 00 00 0 0011234557788888888877788754 Q ss_pred ecCCceeeeeecchhhhhhcccCcCCCCHHHHHHHHHHHHHhhCCeEEEEeeCCCCceEEEEeeCCcceEEEEcCCccee Q lcl|Aclame:pro 72 QEDEYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVYIDDVGLLN 151 (429) Q Consensus 72 ~~~~~~~~~~~~~~~~~~l~~~PN~~~s~~~~~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~l~p~~v~~~~~~~~~~~ 151 (429) ..++. .....+..++.. | ....+...+..+++.+|.||+.+..+.+|.+ .+..++|..+.+..++..... T Consensus 80 ~~~d~----~~~~~~~~~~~~--n---~~d~~~~~~~~~a~~~G~a~~~~~~~edg~~-~i~~~~p~~~~~i~d~~~~~~ 149 (456) T protein:vir:79 80 GSADS----DLALRARRIWRD--N---RMDSVCKQWVKYGLDFGESYLTCWRRDDGTA-TITADSPETMVVSVDPLQPWR 149 (456) T ss_pred CCCCc----cHHHHHHHHHHh--c---ChhHHHHHHHHHHhhcCeeEEEEeeCCCCce-EEEEeccceeEEEEcCCCCCc Confidence 32221 111223444432 2 3346667889999999999999988888876 578889998888776532211 Q ss_pred eeeeEEEeeccc------------CceE----------------E------EccceEEEeecC---CCCCcccccCHHHH Q lcl|Aclame:pro 152 SKTKMWYVVNTG------------GQQR----------------V------LKPEEILHFKNG---ITLDGLVGVPTMEY 194 (429) Q Consensus 152 ~~~~~~~~~~~~------------g~~~----------------~------~~~~evih~~~~---~~~~~~~G~s~~~~ 194 (429) ......++...+ +... . ....++-|.-.. -+.+...|.|-++. T Consensus 150 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pvv~~~N~~~~gd~e~ 229 (456) T protein:vir:79 150 IRSAMRWWRDLDAESDFAIVWSGDGWQKFARPCFVQSSSRRRLVTRISDSWVPVGDAVVTGSPPPVVVYQNPDGMGEVEP 229 (456) T ss_pred eEEEEEEEEecCCceeEEEEEcCCceEEEEEEEEeeccccceeeeccCCceeecccccCCCCceeEEEecCCCCCchhhh Confidence 111111111111 0000 0 000000010000 01123457777777 Q ss_pred HHHHHHHHHHHHHHHHHHHHccCCcceEEEeCCC---CCHHHHHH--HHHHHHHHhcccccccceeecCCCceeEecCCC Q lcl|Aclame:pro 195 LKSTLENSASADKFINNFYKQGLQVKGLVQYVGD---LNEDAKKV--FRENFESMSSGLQNSHRIALMPVGYQFQPISLN 269 (429) Q Consensus 195 ~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~---~~~e~~~~--~~~~~~~~~~g~~~~~~~~vl~~g~~~~~~~~~ 269 (429) ....++......-......+..+.|..++.-... ..++.-+. ....|.. ..+.++.++++.++.++..+ T Consensus 230 v~~liD~~~~~~s~~~~~~~~~a~~~~~~~G~~~~~~~~d~~g~~i~~~~~~~~------~~~~~~~~~~~~~~~q~~~~ 303 (456) T protein:vir:79 230 HIDIINRINRAELQLLSTMAIQAFRQRALKSSEHRLPKVDENGNAIDYASIFEA------APGALWELPPGVDIWESQTN 303 (456) T ss_pred hHHHHHHHHHHHHHHHHHHHHHhhHHHHHhcCCcccccccccccccchhhhhhh------hccccccCCCCcceeeeccc Confidence 7666655554433333333333333333321110 11111111 1122222 12446677888888776644 Q ss_pred hhHHHHHHHHHHHHHHHHHHhcCChhhcCCccc-cccccHHHHHH----------HHHHHHHhHHHHHHHHHHHHhhccc Q lcl|Aclame:pro 270 MSDAQFLENTELTIRQIATAFGIKMHQLNDLSK-ATLNNIEQQQQ----------QFYTDTLQATLTMYEQEMTYKLFLD 338 (429) Q Consensus 270 ~~d~~~~e~~~~~~~~Ia~~fgvp~~~l~~~~~-~~~~n~~~~~~----------~~~~~~l~P~~~~i~~~l~~~ll~~ 338 (429) .-+ .+.+.++..+.+|+..-++|+..+++... .++...+.... ..+..++.-+++.+.. +... T Consensus 304 ~~~-~~~~~l~~~i~~i~~~t~~p~~~~~~~~~N~Sg~Al~~~~~~l~~k~~~~~~~f~~~l~~~~~l~~~-----~~g~ 377 (456) T protein:vir:79 304 DFT-PMLSAIKEHIRQLSSATKTPLPMLMPDSANQSAEGAHNIEKGFLFKCEDRLSIAKIGLEAILVKALQ-----IEGE 377 (456) T ss_pred ChH-HHHHHHHHHHHHHHhhcCCChhHhcccccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----hcCC Confidence 332 27888999999999999999999975321 12211121111 1112222222222111 1111 Q ss_pred hhhcchhhhhhhhhhHhhhhHHHHHHHHHHHHhCCCCCHHHHHHHhCCCCCC----CcceeeeccccccccccccccCCC Q lcl|Aclame:pro 339 SELDKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEA----GGDRLLVNGNMLPIDMAGQAYLKG 414 (429) Q Consensus 339 ~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~Gl~~~~----~gD~~~~~~n~~~~~~~~~~~~~~ 414 (429) .....++..+......+..+.++++.+++.+|+++..-+++++|+.+.+ ..+..... .+. ..+ T Consensus 378 ---~~~~~i~v~w~~~~~~s~~~~ada~~kl~~~G~~~~~~~~~~lg~~~~~i~~~e~~r~~~e-----~~~-----~~~ 444 (456) T protein:vir:79 378 ---SVEDTVDVSFESPDRVTLGEKYSAASLAKAAGESWASIRRNILNYNADQIKQDDLDRAREQ-----ITL-----FAG 444 (456) T ss_pred ---CccccceEEeCCCCCcCHHHHHHHHHHHHhcCCChHHHHHhcCCCCHHHHHHHHHHHHHHH-----HHH-----Hhh Confidence 1111233333444567888999999999999999988888899986531 11110000 000 000 Q ss_pred CCCCCCCCCCCC Q lcl|Aclame:pro 415 GDTNGEVSKEGN 426 (429) Q Consensus 415 g~~~~~~~~~~~ 426 (429) +..+...++.+- T Consensus 445 ~~~~~~~~~~~~ 456 (456) T protein:vir:79 445 NPVQRPQEDGSR 456 (456) T ss_pred hHhhcCCCCCCC Confidence 111100000000 No 165 >protein:vir:9306 Length: 511 # NCBI annotation: phi Mu50B-like protein # Family: family:all:125 # MgeID: mge:165 # MgeName: phi 11 # Cross-refs: genbank:acc:NP_803284;genbank:gi:29028594;genbank:GeneID:1258040 Probab=98.78 E-value=2e-08 Score=62.76 Aligned_cols=413 Identities=10% Similarity=0.044 Sum_probs=183.8 Q ss_pred Cchhhhhhccccccccc----ccccCCch------------------HHHHHhhcCCCCcc----eec----hhhhhccH Q lcl|Aclame:pro 1 MDSVKKFFNFEKRQTSQ----VIELNKDD------------------EKLLEWLGISPSTI----SVK----GKNALKVA 50 (429) Q Consensus 1 Mg~~~~~~~~~~~~~~~----~~~~~~~~------------------~~~~~~~~~~~~~~----~~~----~~~a~~~~ 50 (429) -|=++..|+......-. ........ ..+.+..-...... ... ...=+..+ T Consensus 14 ~~~~~~~~~~~~n~~~~~~~~e~~~~~~~~~i~~~i~~~~~~~~~r~~~l~~Yy~g~~~il~~~~~~~~~~~~~~ki~~n 93 (511) T protein:vir:93 14 RGNINYLFNDEANVVYTYDGTESDLLQNVNEVSKYIEHHMDYQRPRLKVLSDYYEGKTKNLVELTRRKEEYMADNRVAHD 93 (511) T ss_pred hhhhhhhhhhhhCCcccccchhhhhhccHHHHHHHHHHHHHhhHHHHHHHHHHhcccCccccccCcCcccccCcceeecc Confidence 11111111100000000 00000000 00111110000000 000 00001234 Q ss_pred HHHHHHHHHHHhhccCceEEEecCCceeeeeecchhhhhhcccCcCCCCHHHHHHHHHHHHHhhCCeEEEEeeCCCCceE Q lcl|Aclame:pro 51 TVFACIKILSESVSKLPLKIYQEDEYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQ 130 (429) Q Consensus 51 ~v~~~i~~ia~~ia~~~~~~~~~~~~~~~~~~~~~~~~~l~~~PN~~~s~~~~~~~~~~~~l~~G~~~~~~~~~~~g~~~ 130 (429) .....++..+..+-+-|+.+...+++ ....+..++ ...........+..+++.+|.+|+++..+.+|.+ T Consensus 94 ~~k~Iv~~~~~yl~g~p~~~~~~d~~-----~~~~l~~~~-----~~n~~~~~~~~~~~~~~~~G~ay~~vy~de~~~~- 162 (511) T protein:vir:93 94 YASYISDFINGYFLGNPIQYQDDDKD-----VLEVIEAFN-----DLNDVESHNRSLGLDLSIYGKAYELMIRNQDDET- 162 (511) T ss_pred hHHHHHHHHhhhhcccCeeeccCChH-----HHHHHHHHH-----hhcCHhHHHHHHHHHHHhcCeeEEEEEeCCCCce- Confidence 55667777777777777776433221 111222222 2234566777888899999999999999888875 Q ss_pred EEEeeCCcceEEEEcCCccee-eeeeEEEee-cccC---c----eEEEccceEEEeecCCC------------------- Q lcl|Aclame:pro 131 ALWPIDASKVTVYIDDVGLLN-SKTKMWYVV-NTGG---Q----QRVLKPEEILHFKNGIT------------------- 182 (429) Q Consensus 131 ~l~~l~p~~v~~~~~~~~~~~-~~~~~~~~~-~~~g---~----~~~~~~~evih~~~~~~------------------- 182 (429) .+..++|..+.++.+...... .....+|.. ...+ . ...+++..+.+++.... T Consensus 163 ~i~~~~p~~~~~vydd~~~~~~~~~vr~~~~~~~~~~~~~~~~~~~iyt~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~ 242 (511) T protein:vir:93 163 RLYKSDAMSTFVIYDNTIERNSIAGVRYLRTKPIDKTDEDEVFTVDLFTSHGVYRYLTSRTNGLKLTPRENGFESHSFER 242 (511) T ss_pred EEEEEccceeEEEEcCCCCCceEEEEEEEEeeeccccccceEEEEEEEeCCcEEEEEecCCCccccccccccccccCCCc Confidence 577889999888776542211 111111111 1110 0 01234444444321110 Q ss_pred ------CCcccccCHHHHHHHHHHHHHHHHHHHHHHHHccCCcceEEEeCCCCCHHHHHHHHHHHHHHhccccc-cccee Q lcl|Aclame:pro 183 ------LDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGDLNEDAKKVFRENFESMSSGLQN-SHRIA 255 (429) Q Consensus 183 ------~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~g~~~-~~~~~ 255 (429) .+...|.|-++.+...++....+.....+.++..+.|-.+++-......++....++.-.-....... .+... T Consensus 243 vPvv~~~nn~~g~gd~e~v~~liDa~d~~~S~~~~~~~~~~~~~lv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (511) T protein:vir:93 243 MPITEFSNNERRKGDYEKVITLIDLYDNAESDTANYMSDLNDAMLLIKGNLNLDPVEVRKQKEANVLFLEPTVYADSEGR 322 (511) T ss_pred cceEEecCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhCcceeeecCcccCchhhcccccccceecccccccccccc Confidence 01235788888888888877777666666677777776666643334444333222111100000000 00111 Q ss_pred ecCCCceeEecCCChhHHHHHHHHHHHHHHHHHHhcCChhhcCCc-cccccccH----------HHHHHHHHHHHHhHHH Q lcl|Aclame:pro 256 LMPVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDL-SKATLNNI----------EQQQQQFYTDTLQATL 324 (429) Q Consensus 256 vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~fgvp~~~l~~~-~~~~~~n~----------~~~~~~~~~~~l~P~~ 324 (429) -.+++.++..++.......+....+.....|+..-++|....+.. +..++... .......+..++.-++ T Consensus 323 ~~~~~~~~~~l~~~~~~~~~~~~~~~L~~~I~~~s~~P~~~~~~~~~n~Sg~Al~~~~~~l~~k~~~k~~~f~~~l~~~~ 402 (511) T protein:vir:93 323 ETEGSVDGGYIYKQYDVQGTEAYKDRLNSDIHMFTNTPNMKDDNFSGTQSGEAMKYKLFGLEQRTKTKEGLFTKGLRRRA 402 (511) T ss_pred cCCCCcceeEEeecCCHHHHHHHHHHHHHHHHHHhCCcccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Confidence 223455554444433444456777888888888888887544322 11111111 1122334455555555 Q ss_pred HHHHHHHHHhhccc-hhhcchhhhhhhhhhHhhhhHHHHHHHHHHHHhCCCCCHHHHHHHhCCCCCCC--cceeeecc-c Q lcl|Aclame:pro 325 TMYEQEMTYKLFLD-SELDKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEAG--GDRLLVNG-N 400 (429) Q Consensus 325 ~~i~~~l~~~ll~~-~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~Gl~~~~~--gD~~~~~~-n 400 (429) +.|...+..+.-.. ..... .+++.+..-+..+..+.++.+.++ +|+++..-+++++++-+.+. .+.+..-. . T Consensus 403 ~li~~~l~~~~~~~~~~d~~--~i~~~f~~~~p~n~~e~~~~~~kl--~g~iS~et~~~~l~~v~d~~~E~~ri~~E~~~ 478 (511) T protein:vir:93 403 KLLETILKNTWSIDANKDFN--TVRYVYNRNLPKSLIEELKAYIDS--GGKISQTTLMSLFSFFQDPELEVKKIEEDEKE 478 (511) T ss_pred HHHHHHHHhccCcccccccc--cceEEeCCCCCCCHHHHHHHHHHH--hccCchHHHHHhCCCCCCHHHHHHHHHHHHHH Confidence 55554443321111 00111 234444555678888889888887 58899988888887644321 11110000 0 Q ss_pred cccccccccccCCCCCCCCCCCCCCCCCC Q lcl|Aclame:pro 401 MLPIDMAGQAYLKGGDTNGEVSKEGNEGN 429 (429) Q Consensus 401 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~n 429 (429) .............++ .+++.+.++++++ T Consensus 479 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 506 (511) T protein:vir:93 479 SIKKAQKGIYKDPRD-INDDEQDDDTKDT 506 (511) T ss_pred HHHHHhhhcccCCCC-CCCCCCCCccccc Confidence 000000000111111 1122222222222 No 166 >protein:vir:3028 Length: 500 # NCBI annotation: minor capsid protein # Family: family:all:898 # MgeID: mge:61 # MgeName: PhiNIH1.1 # Cross-refs: genbank:acc:NP_438141;genbank:gi:16271804;genbank:GeneID:929241 Probab=98.75 E-value=6.8e-08 Score=59.89 Aligned_cols=399 Identities=10% Similarity=0.025 Sum_probs=190.9 Q ss_pred Cchhhhhhccccccccc-----------ccccCCchHHHH------HhhcCCCCcc-eec------hhhhhccHHHHHHH Q lcl|Aclame:pro 1 MDSVKKFFNFEKRQTSQ-----------VIELNKDDEKLL------EWLGISPSTI-SVK------GKNALKVATVFACI 56 (429) Q Consensus 1 Mg~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~------~~~~~~~~~~-~~~------~~~a~~~~~v~~~i 56 (429) ||+|+++.+++++.... -.....+...+. .|...-.... ..+ .+.......-..++ T Consensus 1 m~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~i~~~~~~Y~g~~~~~~~~~~~~~~~~~~~~slnl~~~i~ 80 (500) T protein:vir:30 1 MGVIQKIKNLVTRSKYVMTTQSLTNITDHPKIAISKLEYDRITTNLKYYKSDWDSVLYLNTDGETKKRDLNHLPIARTAA 80 (500) T ss_pred CchHHHHHHHHHHHHHHhhcchhhhhhccccccCCHHHHHHHHHHHHHhcCCCCCcccccCCCCcccCceeecchHHHHH Confidence 99999999887652210 011222322211 2222111111 000 11112234445556 Q ss_pred HHHHHhhccCceEEEecCCceeeeeecchhhhhhcccCcCCCCHHHHHHHHHHHHHhhCCeEEEEeeCCCCceEEEEeeC Q lcl|Aclame:pro 57 KILSESVSKLPLKIYQEDEYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPID 136 (429) Q Consensus 57 ~~ia~~ia~~~~~~~~~~~~~~~~~~~~~~~~~l~~~PN~~~s~~~~~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~l~ 136 (429) +.+|+-+..-+..+.-.++ .+...|+ +-...-.........+...+..|.+++.+..+. +. ..+..++ T Consensus 81 ~~~A~lv~~e~~~i~~~d~---------~~~~~l~-~il~~n~f~~~~~~~~e~a~a~G~~~~k~~~d~-~~-~~I~~v~ 148 (500) T protein:vir:30 81 KKIASLVFNEQAEIKVDDD---------AANEFIS-ETLKNDRFNKNFERYLESCLALGGLAMRPYVDG-DK-VRVAFVQ 148 (500) T ss_pred HHHhhhhcCCcceEecCCh---------HHHHHHH-HHHhhccHHHHHHHHHHHHhhcCCEEEEEEEeC-Cc-eEEEEEc Confidence 6667666554433322211 2222232 111123345566677788888999998887764 33 3466677 Q ss_pred CcceEEEEcC-Cccee-----------------ee-------------eeEEEeecc-----cCceEEE-------cc-- Q lcl|Aclame:pro 137 ASKVTVYIDD-VGLLN-----------------SK-------------TKMWYVVNT-----GGQQRVL-------KP-- 171 (429) Q Consensus 137 p~~v~~~~~~-~~~~~-----------------~~-------------~~~~~~~~~-----~g~~~~~-------~~-- 171 (429) |+.+-+...+ ..... +. ...+..+.. -|..+.+ .+ T Consensus 149 ad~~~P~~~d~~~~~~~a~~~~~~~~~~~~~~~yt~lE~h~~~~~~~~~I~n~ly~~~~~~~lG~~v~l~~~~~~l~~~~ 228 (500) T protein:vir:30 149 APVFLPLQSNTQDVSSAAVVIKSVKTINGKEVYYTLIEFHEWQSSDDYVISNELYRSDDKAKVGSRVPLSEVYKDLKDEA 228 (500) T ss_pred CCeeEEEEEcCCCeEEEEEEEEEeeeecCCceEEEEEEEEEEeCCceeEEEEEEEecccccccCcccccccccCCcCcce Confidence 7776653221 11100 00 000000110 0111100 00 Q ss_pred -------ceEEEeecCCCC----CcccccCHHHHHHHHHHHHHHHHHHHHHHHHccCCcceEE-----EeCCC-CCHHHH Q lcl|Aclame:pro 172 -------EEILHFKNGITL----DGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLV-----QYVGD-LNEDAK 234 (429) Q Consensus 172 -------~evih~~~~~~~----~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~-----~~~~~-~~~e~~ 234 (429) --..||+.+.+. ..+.|.|.+..+...++..+........-++.|- ...++ ..... .+.+.. T Consensus 229 ~~~~~~~p~f~~~~~~~~N~~~~~sp~G~S~~~~~~~lid~lD~~~s~~~~e~~~g~-~~i~v~~~~l~~~~~~~~g~~~ 307 (500) T protein:vir:30 229 KVTDVTRPIFTYLKTPGMNNKDINSPLGLSIFDNAKTTIDFINTTYDEFMWEVKMGQ-RRVAVPESLTALTVRTTDGDVV 307 (500) T ss_pred EeccCCCccEEEecCCccccccCCCccCCchhhhhHHHHHHHHHHHHHHHHHHHhCc-ceeeechHHhcccCCCCCcccc Confidence 013455543222 3457999999999999888877777777777643 33333 11111 111100 Q ss_pred HHHHHH-HHHHhcccccccceeecCCCceeEecCCChhHHHHHHHHHHHHHHHHHHhcCChhhcCCccccccccHHH--- Q lcl|Aclame:pro 235 KVFREN-FESMSSGLQNSHRIALMPVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKATLNNIEQ--- 310 (429) Q Consensus 235 ~~~~~~-~~~~~~g~~~~~~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~fgvp~~~l~~~~~~~~~n~~~--- 310 (429) ....-. -+..|.... .-..++-.++.++....+-++.+..+...++|+...|+++..++....+. .++.+ T Consensus 308 ~~~~~d~~~~~~~~~~-----~~~~~~~~i~~~~~~ir~e~~~~~l~~~l~~i~~~~gls~~~~~~~~~g~-~TAtei~s 381 (500) T protein:vir:30 308 PRPRFESDQNVYIRMG-----GRDLDSSAIQDLTTPIRADDYIKAINEGLSLFEMQIGVSAGLFSFDGKSM-KTATEIVS 381 (500) T ss_pred CCcccCCCcceEEEcC-----CCCCcCcceeEeccccChHHHHHHHHHHHHHHHHHhCCCccccccCcCcc-ccHHHHHH Confidence 000000 000011000 00123345667776667778899999999999999999999988654432 22222 Q ss_pred ----------HHHHHHHHHHhHHHHHHHHHHHHhhccchhhcchhhhhhhhhhHhhhhHHHHHHHHHHHHhCCCCCHHHH Q lcl|Aclame:pro 311 ----------QQQQFYTDTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEA 380 (429) Q Consensus 311 ----------~~~~~~~~~l~P~~~~i~~~l~~~ll~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~ 380 (429) .....++.+|..+++.|.......-+........+.+.+++++-...|.++.++...+++.+|+|+.-++ T Consensus 382 ~~~~~~~t~~~~~~~~~~al~~lv~~il~~~~~~~~~~~~~~~~~~v~v~f~d~i~~d~~~~~~~~~~~v~aGi~s~~~~ 461 (500) T protein:vir:30 382 ENSDTYQMRNSIVALVEQSLKELVISIFEIAKAYDLYQSEVPSMDNISISLDDGVFTDRDAELDYWIKVVNAGFGTREMA 461 (500) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCcceEEEeCCCCCCCHHHHHHHHHHHHHcCCCCHHHH Confidence 2233445555555555554322110111112233445555666677899999999999999999999998 Q ss_pred HHHh-CCCCCCCcceeeeccccccccccccccCCCCCCCCCCCCCCCC Q lcl|Aclame:pro 381 RSKE-DLPPEAGGDRLLVNGNMLPIDMAGQAYLKGGDTNGEVSKEGNE 427 (429) Q Consensus 381 R~~~-Gl~~~~~gD~~~~~~n~~~~~~~~~~~~~~g~~~~~~~~~~~~ 427 (429) +.++ |++..+ ..+. ...+. ...............-.+| T Consensus 462 i~~~~g~~eee-a~~~-----l~~i~---~E~~~~~~~~~~~~~~~g~ 500 (500) T protein:vir:30 462 IQKVLNVTEEK-AQEI-----AAEIN---TGIVDEINQQRTDTHLYGE 500 (500) T ss_pred HHhcCCCCHHH-HHHH-----HHHHH---HhccccCCCCCccccccCC Confidence 7554 654321 1110 00000 0011111111112222233 No 167 >protein:vir:9815 Length: 500 # NCBI annotation: putative minor capsid protein # Family: family:all:898 # MgeID: mge:176 # MgeName: 315.4 # Cross-refs: genbank:acc:NP_795577;genbank:gi:28876344;genbank:GeneID:1257866 Probab=98.75 E-value=6.8e-08 Score=59.89 Aligned_cols=399 Identities=10% Similarity=0.025 Sum_probs=190.9 Q ss_pred Cchhhhhhccccccccc-----------ccccCCchHHHH------HhhcCCCCcc-eec------hhhhhccHHHHHHH Q lcl|Aclame:pro 1 MDSVKKFFNFEKRQTSQ-----------VIELNKDDEKLL------EWLGISPSTI-SVK------GKNALKVATVFACI 56 (429) Q Consensus 1 Mg~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~------~~~~~~~~~~-~~~------~~~a~~~~~v~~~i 56 (429) ||+|+++.+++++.... -.....+...+. .|...-.... ..+ .+.......-..++ T Consensus 1 m~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~i~~~~~~Y~g~~~~~~~~~~~~~~~~~~~~slnl~~~i~ 80 (500) T protein:vir:98 1 MGVIQKIKNLVTRSKYVMTTQSLTNITDHPKIAISKLEYDRITTNLKYYKSDWDSVLYLNTDGETKKRDLNHLPIARTAA 80 (500) T ss_pred CchHHHHHHHHHHHHHHhhcchhhhhhccccccCCHHHHHHHHHHHHHhcCCCCCcccccCCCCcccCceeecchHHHHH Confidence 99999999887652210 011222322211 2222111111 000 11112234445556 Q ss_pred HHHHHhhccCceEEEecCCceeeeeecchhhhhhcccCcCCCCHHHHHHHHHHHHHhhCCeEEEEeeCCCCceEEEEeeC Q lcl|Aclame:pro 57 KILSESVSKLPLKIYQEDEYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPID 136 (429) Q Consensus 57 ~~ia~~ia~~~~~~~~~~~~~~~~~~~~~~~~~l~~~PN~~~s~~~~~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~l~ 136 (429) +.+|+-+..-+..+.-.++ .+...|+ +-...-.........+...+..|.+++.+..+. +. ..+..++ T Consensus 81 ~~~A~lv~~e~~~i~~~d~---------~~~~~l~-~il~~n~f~~~~~~~~e~a~a~G~~~~k~~~d~-~~-~~I~~v~ 148 (500) T protein:vir:98 81 KKIASLVFNEQAEIKVDDD---------AANEFIS-ETLKNDRFNKNFERYLESCLALGGLAMRPYVDG-DK-VRVAFVQ 148 (500) T ss_pred HHHhhhhcCCcceEecCCh---------HHHHHHH-HHHhhccHHHHHHHHHHHHhhcCCEEEEEEEeC-Cc-eEEEEEc Confidence 6667666554433322211 2222232 111123345566677788888999998887764 33 3466677 Q ss_pred CcceEEEEcC-Cccee-----------------ee-------------eeEEEeecc-----cCceEEE-------cc-- Q lcl|Aclame:pro 137 ASKVTVYIDD-VGLLN-----------------SK-------------TKMWYVVNT-----GGQQRVL-------KP-- 171 (429) Q Consensus 137 p~~v~~~~~~-~~~~~-----------------~~-------------~~~~~~~~~-----~g~~~~~-------~~-- 171 (429) |+.+-+...+ ..... +. ...+..+.. -|..+.+ .+ T Consensus 149 ad~~~P~~~d~~~~~~~a~~~~~~~~~~~~~~~yt~lE~h~~~~~~~~~I~n~ly~~~~~~~lG~~v~l~~~~~~l~~~~ 228 (500) T protein:vir:98 149 APVFLPLQSNTQDVSSAAVVIKSVKTINGKEVYYTLIEFHEWQSSDDYVISNELYRSDDKAKVGSRVPLSEVYKDLKDEA 228 (500) T ss_pred CCeeEEEEEcCCCeEEEEEEEEEeeeecCCceEEEEEEEEEEeCCceeEEEEEEEecccccccCcccccccccCCcCcce Confidence 7776653221 11100 00 000000110 0111100 00 Q ss_pred -------ceEEEeecCCCC----CcccccCHHHHHHHHHHHHHHHHHHHHHHHHccCCcceEE-----EeCCC-CCHHHH Q lcl|Aclame:pro 172 -------EEILHFKNGITL----DGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLV-----QYVGD-LNEDAK 234 (429) Q Consensus 172 -------~evih~~~~~~~----~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~-----~~~~~-~~~e~~ 234 (429) --..||+.+.+. ..+.|.|.+..+...++..+........-++.|- ...++ ..... .+.+.. T Consensus 229 ~~~~~~~p~f~~~~~~~~N~~~~~sp~G~S~~~~~~~lid~lD~~~s~~~~e~~~g~-~~i~v~~~~l~~~~~~~~g~~~ 307 (500) T protein:vir:98 229 KVTDVTRPIFTYLKTPGMNNKDINSPLGLSIFDNAKTTIDFINTTYDEFMWEVKMGQ-RRVAVPESLTALTVRTTDGDVV 307 (500) T ss_pred EeccCCCccEEEecCCccccccCCCccCCchhhhhHHHHHHHHHHHHHHHHHHHhCc-ceeeechHHhcccCCCCCcccc Confidence 013455543222 3457999999999999888877777777777643 33333 11111 111100 Q ss_pred HHHHHH-HHHHhcccccccceeecCCCceeEecCCChhHHHHHHHHHHHHHHHHHHhcCChhhcCCccccccccHHH--- Q lcl|Aclame:pro 235 KVFREN-FESMSSGLQNSHRIALMPVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKATLNNIEQ--- 310 (429) Q Consensus 235 ~~~~~~-~~~~~~g~~~~~~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~fgvp~~~l~~~~~~~~~n~~~--- 310 (429) ....-. -+..|.... .-..++-.++.++....+-++.+..+...++|+...|+++..++....+. .++.+ T Consensus 308 ~~~~~d~~~~~~~~~~-----~~~~~~~~i~~~~~~ir~e~~~~~l~~~l~~i~~~~gls~~~~~~~~~g~-~TAtei~s 381 (500) T protein:vir:98 308 PRPRFESDQNVYIRMG-----GRDLDSSAIQDLTTPIRADDYIKAINEGLSLFEMQIGVSAGLFSFDGKSM-KTATEIVS 381 (500) T ss_pred CCcccCCCcceEEEcC-----CCCCcCcceeEeccccChHHHHHHHHHHHHHHHHHhCCCccccccCcCcc-ccHHHHHH Confidence 000000 000011000 00123345667776667778899999999999999999999988654432 22222 Q ss_pred ----------HHHHHHHHHHhHHHHHHHHHHHHhhccchhhcchhhhhhhhhhHhhhhHHHHHHHHHHHHhCCCCCHHHH Q lcl|Aclame:pro 311 ----------QQQQFYTDTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEA 380 (429) Q Consensus 311 ----------~~~~~~~~~l~P~~~~i~~~l~~~ll~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~ 380 (429) .....++.+|..+++.|.......-+........+.+.+++++-...|.++.++...+++.+|+|+.-++ T Consensus 382 ~~~~~~~t~~~~~~~~~~al~~lv~~il~~~~~~~~~~~~~~~~~~v~v~f~d~i~~d~~~~~~~~~~~v~aGi~s~~~~ 461 (500) T protein:vir:98 382 ENSDTYQMRNSIVALVEQSLKELVISIFEIAKAYDLYQSEVPSMDNISISLDDGVFTDRDAELDYWIKVVNAGFGTREMA 461 (500) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCcceEEEeCCCCCCCHHHHHHHHHHHHHcCCCCHHHH Confidence 2233445555555555554322110111112233445555666677899999999999999999999998 Q ss_pred HHHh-CCCCCCCcceeeeccccccccccccccCCCCCCCCCCCCCCCC Q lcl|Aclame:pro 381 RSKE-DLPPEAGGDRLLVNGNMLPIDMAGQAYLKGGDTNGEVSKEGNE 427 (429) Q Consensus 381 R~~~-Gl~~~~~gD~~~~~~n~~~~~~~~~~~~~~g~~~~~~~~~~~~ 427 (429) +.++ |++..+ ..+. ...+. ...............-.+| T Consensus 462 i~~~~g~~eee-a~~~-----l~~i~---~E~~~~~~~~~~~~~~~g~ 500 (500) T protein:vir:98 462 IQKVLNVTEEK-AQEI-----AAEIN---TGIVDEINQQRTDTHLYGE 500 (500) T ss_pred HHhcCCCCHHH-HHHH-----HHHHH---HhccccCCCCCccccccCC Confidence 7554 654321 1110 00000 0011111111112222233 No 168 >protein:vir:99072 Length: 479 # NCBI annotation: gp27 # Family: family:all:524 # MgeID: mge:1671 # MgeName: Wildcat # Cross-refs: genbank:acc:YP_655892;genbank:gi:109521464;genbank:GeneID:4158037 Probab=98.74 E-value=3.1e-08 Score=61.74 Aligned_cols=392 Identities=10% Similarity=0.011 Sum_probs=169.9 Q ss_pred Cc------hh-hhhhcccccccccccccCCchHHHHHhhcCCCCc------ceechhhhh----ccHHHHHHHHHHHHhh Q lcl|Aclame:pro 1 MD------SV-KKFFNFEKRQTSQVIELNKDDEKLLEWLGISPST------ISVKGKNAL----KVATVFACIKILSESV 63 (429) Q Consensus 1 Mg------~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~a~----~~~~v~~~i~~ia~~i 63 (429) |- .+ .++++...+... ....+-++.-..+.. ..-.....+ .+.....+|+.+++.+ T Consensus 9 l~~~~~~~~~~~~l~~~~~~~~~-------r~~~~~~YY~g~~~i~~~~~~~~~~~~~~~~~~~~~n~~~~iVd~~~~~l 81 (479) T protein:vir:99 9 LSSEGLAKYLETKVFPKMNTECE-------RLDDFEAWTKNGQEVPDLATRHKNKEREVLQQLSRKPWMGLMVNSFAQQL 81 (479) T ss_pred CChhHHHHHHHHHHHHHHHHHhH-------HHHHHHHHHhcCCcccccccccCChhHHHHHHHhhcCcHHHHHHHHHhhc Confidence 11 01 111110000000 000000111000000 000111111 1233445666666544 Q ss_pred ccCceEEEecCCceeeeeecchhhhhhcccCcCCCCHHHHHHHHHHHHHhhCCeEEEEee-----CCCCceEEEEeeCCc Q lcl|Aclame:pro 64 SKLPLKIYQEDEYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEF-----DRKGKVQALWPIDAS 138 (429) Q Consensus 64 a~~~~~~~~~~~~~~~~~~~~~~~~~l~~~PN~~~s~~~~~~~~~~~~l~~G~~~~~~~~-----~~~g~~~~l~~l~p~ 138 (429) --..|. ..++. ....+..++.. | ........+..+++.+|.+|+++.. +..|.+ .+.+++|. T Consensus 82 ~~~gf~---~~d~~----~~~~~~~i~~~--N---~~d~~~~~~~~~a~~~G~af~~v~~~~~~~d~~g~~-~i~~~~p~ 148 (479) T protein:vir:99 82 IVDGYR---KTGTN----ENAKGWDTWRL--N---QMDKQQFWLNRAVLTFGYAFIKVTSGISPLDGTTVA-RIKCIDPR 148 (479) T ss_pred cccccc---CCCch----hhHHHHHHHHh--c---ChhHHHHHHHHHHhhcCceEEEEecCCCCcCCCCce-EEEEechh Confidence 322222 22111 11234444432 3 2335667788899999999998864 333443 46777888 Q ss_pred ceEEEEcCCcceeeeeeEE------------------EeecccCceEE-------EccceEEEeecCCCCCcccccCHHH Q lcl|Aclame:pro 139 KVTVYIDDVGLLNSKTKMW------------------YVVNTGGQQRV-------LKPEEILHFKNGITLDGLVGVPTME 193 (429) Q Consensus 139 ~v~~~~~~~~~~~~~~~~~------------------~~~~~~g~~~~-------~~~~evih~~~~~~~~~~~G~s~~~ 193 (429) .+.+.+++...... ..+. ++....|.... +..--|++|++.. .....|.|-++ T Consensus 149 ~~~~iydd~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~g~vPvv~f~n~~-~~~~~g~sd~e 226 (479) T protein:vir:99 149 DAFAIWEDPYWDEW-PKYLLERQPNGQYWWWTEEDYSIFEFKQGKFIYRETVSHDYGHIPFVRYVNVM-DLRGVCYGDVE 226 (479) T ss_pred heEEEecCCcccce-eeEEEeecCceeEEEEecceEEEEEecCCceeeccccccCCCCcceEEeecCC-CcCcCCcchhH Confidence 88877654321110 0011 11111111111 1222367777443 33457999888 Q ss_pred HHHHHHHHHHHHHHHHHHHHHccCCcceEEEeCCCCCHHHHHHHHHHHHHHhccccccccee-ecCCCceeEecCCChhH Q lcl|Aclame:pro 194 YLKSTLENSASADKFINNFYKQGLQVKGLVQYVGDLNEDAKKVFRENFESMSSGLQNSHRIA-LMPVGYQFQPISLNMSD 272 (429) Q Consensus 194 ~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~g~~~~~~~~-vl~~g~~~~~~~~~~~d 272 (429) .+...++.............+-.+.|..++.--........+ ...+.- ..++++ .-+++.++.+++.... T Consensus 227 ~v~~liDa~~~~~s~~~~~~~~~a~p~~~i~G~~~~~~~~~~--~~~~~~------~~~~i~~~~~~~~~~~q~~~~~~- 297 (479) T protein:vir:99 227 PLVTVAKAIDKTGLDILLVQHHQSFQIRWATGLMLPEGANAD--QEKMRF------AQESMLISQNEKASFGAIPAAPL- 297 (479) T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhchhhhhcCCCcccccccc--hhcccc------ccccceeecCCCceEEEecccch- Confidence 888888877777766666666666666555421111100000 011111 112233 3456777776653322 Q ss_pred HHHHHHHHHHHHHHHHHhcCChhhcCCccccccccHHHH----------HHHHHHHHHhHHHHHHHHHHHHhhccchhhc Q lcl|Aclame:pro 273 AQFLENTELTIRQIATAFGIKMHQLNDLSKATLNNIEQQ----------QQQFYTDTLQATLTMYEQEMTYKLFLDSELD 342 (429) Q Consensus 273 ~~~~e~~~~~~~~Ia~~fgvp~~~l~~~~~~~~~n~~~~----------~~~~~~~~l~P~~~~i~~~l~~~ll~~~~~~ 342 (429) ..+++.++..+.+|+..=++|+..+|..+.+++..+... ....+..++.-+++.+..-. ...... T Consensus 298 ~~~~~~l~~~i~~i~~~t~~p~~~~g~~~n~Sg~Al~~~~~~l~~ka~~~~~~f~~al~~~~~l~~~~~-----~~~~~~ 372 (479) T protein:vir:99 298 DGLLNAYKESLLEFLALAQLPPHIAGQIVNVAADALAAGTRQTMQKLFEKQATWKASHNQTMRLVNKIE-----GRTEEA 372 (479) T ss_pred HHHHHHHHHHHHHHhccCCCCHHHcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-----CCCccc Confidence 236788888889999999999998875432222111111 11222222333333222111 111011 Q ss_pred chhhhhhhhhhHhhhhHHHHHHHHHHHHhCCCCCHHHHHHHh-CCCCC--CCccee--ee---ccccccccc----cccc Q lcl|Aclame:pro 343 KGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKE-DLPPE--AGGDRL--LV---NGNMLPIDM----AGQA 410 (429) Q Consensus 343 ~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~-Gl~~~--~~gD~~--~~---~~n~~~~~~----~~~~ 410 (429) ..+.+.+.+......+..+.++.+.+++.+|+++...+.+++ |+++. +..... .. ..-...+.. ..+. T Consensus 373 ~~~~i~~~w~~~~~~s~~~~ad~~~kl~~ag~is~et~l~~l~gv~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 452 (479) T protein:vir:99 373 TDLDFTITWQDVTIQSLAQFADAWAKMVESLKIPAEGVWDMIPNLDQSTVNGWKEIYDREGDFGKYMRKLQNGPDPAEQR 452 (479) T ss_pred cceeeeEEecCCCCCCHHHHHHHHHHHHhcCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHhcccCccccc Confidence 112233332333456788899999999999999998888877 77642 100000 00 000000000 0111 Q ss_pred cCCCCCCCCCCCCCCCCCC Q lcl|Aclame:pro 411 YLKGGDTNGEVSKEGNEGN 429 (429) Q Consensus 411 ~~~~g~~~~~~~~~~~~~n 429 (429) ....+..+.+ +.....|. T Consensus 453 ~~~~~~~~~~-~~~~~~~~ 470 (479) T protein:vir:99 453 GGPNGATNMQ-QANNKTGE 470 (479) T ss_pred CCCCCCCCCC-CCCCCCcc Confidence 1111111111 11111122 No 169 >protein:vir:105819 Length: 456 # NCBI annotation: gp3 # Family: family:all:5096 # MgeID: mge:1636 # MgeName: PMC # Cross-refs: genbank:acc:YP_655764;genbank:gi:109522087;genbank:GeneID:4157627 Probab=98.73 E-value=3.7e-09 Score=66.81 Aligned_cols=385 Identities=9% Similarity=0.013 Sum_probs=176.7 Q ss_pred CchhhhhhcccccccccccccCCchHHHHHhhcCCCCc--ceech----hh---hhccHHHHHHHHHHHHhhccCceEEE Q lcl|Aclame:pro 1 MDSVKKFFNFEKRQTSQVIELNKDDEKLLEWLGISPST--ISVKG----KN---ALKVATVFACIKILSESVSKLPLKIY 71 (429) Q Consensus 1 Mg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~----~~---a~~~~~v~~~i~~ia~~ia~~~~~~~ 71 (429) .-+++++.......... ...+-++..+.... ..... +. -..+....-+|+..++.+-.-||.+. T Consensus 7 ~~~~~~l~~~~~~~~~r-------~~~l~~Yy~g~~~i~~~~~~~~~~~~~~~~k~~~n~~~~ivd~~~~~l~~~~~~~~ 79 (456) T protein:vir:10 7 AEWLPVLTKRIDDGMSR-------VRLLARYSNGDAPLPELTRNTSAAWRSFQREARTNWGLMVRDSVADRIIPNGITVG 79 (456) T ss_pred HHHHHHHHHHHHHHHHH-------HHHHHHHHhcCCCchhcCcccChhhhhhhhhhhcchHHHHHHHHHhhhccCCeecC Confidence 22222222111100000 00011111111100 00000 01 11234557788888888878888764 Q ss_pred ecCCceeeeeecchhhhhhcccCcCCCCHHHHHHHHHHHHHhhCCeEEEEeeCCCCceEEEEeeCCcceEEEEcCCccee Q lcl|Aclame:pro 72 QEDEYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVYIDDVGLLN 151 (429) Q Consensus 72 ~~~~~~~~~~~~~~~~~~l~~~PN~~~s~~~~~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~l~p~~v~~~~~~~~~~~ 151 (429) ..++.. ....+..++. + | ....+...+..+++.+|.+|+.+..+..|.+ .+..++|..+.+..+...... T Consensus 80 ~~~d~~----~~~~~~~i~~-~-N---~~d~~~~~~~~~a~i~G~ay~~v~~d~~g~~-~i~~~~p~~~~~i~d~~~~~~ 149 (456) T protein:vir:10 80 GSADSD----LALRARRIWR-D-N---RMDSVCKQWVKYGLDFGESYLTCWRRDDGTA-TITADSPETMVVSVDPLQPWR 149 (456) T ss_pred CCCCcc----hHHHHHHHHH-h-c---ChhhHHHHHHHHHhhcCeeEEEEeeCCCCce-EEEEEccceeEEEEcCCCCcc Confidence 332211 1112333443 2 2 3345566788999999999999998888865 567888998888777543211 Q ss_pred eeeeEEEeecccCce----------------------------EEEccc------------eEEEeecCCCCCcccccCH Q lcl|Aclame:pro 152 SKTKMWYVVNTGGQQ----------------------------RVLKPE------------EILHFKNGITLDGLVGVPT 191 (429) Q Consensus 152 ~~~~~~~~~~~~g~~----------------------------~~~~~~------------evih~~~~~~~~~~~G~s~ 191 (429) ......++...++.. ...... .++.+- +.+...|.|- T Consensus 150 ~~~~i~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pvv---~~~N~~g~gd 226 (456) T protein:vir:10 150 IRAAMRWWRDLDAESDFAIVWSGDGWQKFARPCFVQSSSRRRLVTRISDSWVPVGDAVVTGSPPPVV---VYQNPDGMGE 226 (456) T ss_pred eEEEEEEEEecCCceeEEEEEeccceeEEEEEEEEeecccceeeeecCCceeeccccCCCCCceeEE---EecCCCCCch Confidence 111111111111100 000000 011110 1123468888 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHccCCcceEEEeCCC---CCHHHHHHH--HHHHHHHhcccccccceeecCCCceeEec Q lcl|Aclame:pro 192 MEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGD---LNEDAKKVF--RENFESMSSGLQNSHRIALMPVGYQFQPI 266 (429) Q Consensus 192 ~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~---~~~e~~~~~--~~~~~~~~~g~~~~~~~~vl~~g~~~~~~ 266 (429) ++.....++....+.-......+..+.|.-++..... ..++.-+.+ ...|.. ..+.++.++++.++.++ T Consensus 227 ~e~vi~liDa~~~~~s~~~~~~~~~a~~~~~i~G~~~~~~~~d~~g~~~~~~~~~~~------~~~~~~~~~~~~~~~q~ 300 (456) T protein:vir:10 227 VEPHIDIINRINRAELQLLSTMAIQAFRQRALKSTEHGLPNVDENGNAIDYASIFEA------APGALWELPPGVDIWES 300 (456) T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHhhhHhHhhhccCcccccccccccccchhhhhhh------hccccccCCCCcceEEe Confidence 8877776666655544433333433444333321110 111111111 112222 12446677889998877 Q ss_pred CCChhHHHHHHHHHHHHHHHHHHhcCChhhcCCccccccccHHHHHHHHHHHHHhHHHHHHHHHHHHhh-------ccch Q lcl|Aclame:pro 267 SLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKATLNNIEQQQQQFYTDTLQATLTMYEQEMTYKL-------FLDS 339 (429) Q Consensus 267 ~~~~~d~~~~e~~~~~~~~Ia~~fgvp~~~l~~~~~~~~~n~~~~~~~~~~~~l~P~~~~i~~~l~~~l-------l~~~ 339 (429) +...-+ .+.+..+..+.+|+..-++|+..+++... |.......+....+.-.+...+..|...+ +.-. T Consensus 301 ~~~~~~-~~~~~l~~~i~~~~~~s~~p~~~~~~~~~----N~Sg~Ai~~~~~~l~~k~~~~~~~f~~~l~~~~rl~~~~~ 375 (456) T protein:vir:10 301 QANDFT-PMLSAIKEHIRQLSSATKTPLPMLMPDSA----NQSAEGAHNIEKGFLFKCEDRLSIAKIGLEAILVKALQIE 375 (456) T ss_pred cccChh-HHHHHHHHHHHHHHhccCCChHHhccccc----ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc Confidence 644322 37888999999999999999999876331 11111112222222222222222222111 0000 Q ss_pred hhcchhhhhhhhhhHhhhhHHHHHHHHHHHHhCCCCCHHHHHHHhCCCCCC----CcceeeeccccccccccccccCCCC Q lcl|Aclame:pro 340 ELDKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEA----GGDRLLVNGNMLPIDMAGQAYLKGG 415 (429) Q Consensus 340 ~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~Gl~~~~----~gD~~~~~~n~~~~~~~~~~~~~~g 415 (429) +......+++.+......+..+.++++.++..+|+++..-+++++|+.+.+ ..+...-..+ .......+.+ T Consensus 376 g~~~~~~~~v~w~~~~~~~~~~~ada~~kl~~~gi~~~~~~~~~lg~~~~~i~~~e~er~~~e~~-----~~~~~~~~~~ 450 (456) T protein:vir:10 376 GESVEDTVDVSFESPDRVTLGEKYSAASLAKAAGESWASIRRNILNYNADQIKQDDLDRAREQIT-----LFAGNPVQRP 450 (456) T ss_pred CCCcccceeEEecCCCCcCHHHHHHHHHHHHHcCCChHHHHHhhCCCCHHHHHHHHHHHHHHHHH-----HHhhhhhhcC Confidence 011111233333445667888999999999999999888888999987531 1111100000 0000000101 Q ss_pred CCCCCCCC Q lcl|Aclame:pro 416 DTNGEVSK 423 (429) Q Consensus 416 ~~~~~~~~ 423 (429) +.++. . T Consensus 451 ~~~~~--~ 456 (456) T protein:vir:10 451 QEDGS--R 456 (456) T ss_pred CCCCC--C Confidence 11110 0 No 170 >protein:vir:102602 Length: 456 # NCBI annotation: gp3 # Family: family:all:5096 # MgeID: mge:1661 # MgeName: Llij # Cross-refs: genbank:acc:YP_654999;genbank:gi:109392189;genbank:GeneID:4157224 Probab=98.73 E-value=3.7e-09 Score=66.81 Aligned_cols=385 Identities=9% Similarity=0.013 Sum_probs=176.7 Q ss_pred CchhhhhhcccccccccccccCCchHHHHHhhcCCCCc--ceech----hh---hhccHHHHHHHHHHHHhhccCceEEE Q lcl|Aclame:pro 1 MDSVKKFFNFEKRQTSQVIELNKDDEKLLEWLGISPST--ISVKG----KN---ALKVATVFACIKILSESVSKLPLKIY 71 (429) Q Consensus 1 Mg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~----~~---a~~~~~v~~~i~~ia~~ia~~~~~~~ 71 (429) .-+++++.......... ...+-++..+.... ..... +. -..+....-+|+..++.+-.-||.+. T Consensus 7 ~~~~~~l~~~~~~~~~r-------~~~l~~Yy~g~~~i~~~~~~~~~~~~~~~~k~~~n~~~~ivd~~~~~l~~~~~~~~ 79 (456) T protein:vir:10 7 AEWLPVLTKRIDDGMSR-------VRLLARYSNGDAPLPELTRNTSAAWRSFQREARTNWGLMVRDSVADRIIPNGITVG 79 (456) T ss_pred HHHHHHHHHHHHHHHHH-------HHHHHHHHhcCCCchhcCcccChhhhhhhhhhhcchHHHHHHHHHhhhccCCeecC Confidence 22222222111100000 00011111111100 00000 01 11234557788888888878888764 Q ss_pred ecCCceeeeeecchhhhhhcccCcCCCCHHHHHHHHHHHHHhhCCeEEEEeeCCCCceEEEEeeCCcceEEEEcCCccee Q lcl|Aclame:pro 72 QEDEYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVYIDDVGLLN 151 (429) Q Consensus 72 ~~~~~~~~~~~~~~~~~~l~~~PN~~~s~~~~~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~l~p~~v~~~~~~~~~~~ 151 (429) ..++.. ....+..++. + | ....+...+..+++.+|.+|+.+..+..|.+ .+..++|..+.+..+...... T Consensus 80 ~~~d~~----~~~~~~~i~~-~-N---~~d~~~~~~~~~a~i~G~ay~~v~~d~~g~~-~i~~~~p~~~~~i~d~~~~~~ 149 (456) T protein:vir:10 80 GSADSD----LALRARRIWR-D-N---RMDSVCKQWVKYGLDFGESYLTCWRRDDGTA-TITADSPETMVVSVDPLQPWR 149 (456) T ss_pred CCCCcc----hHHHHHHHHH-h-c---ChhhHHHHHHHHHhhcCeeEEEEeeCCCCce-EEEEEccceeEEEEcCCCCcc Confidence 332211 1112333443 2 2 3345566788999999999999998888865 567888998888777543211 Q ss_pred eeeeEEEeecccCce----------------------------EEEccc------------eEEEeecCCCCCcccccCH Q lcl|Aclame:pro 152 SKTKMWYVVNTGGQQ----------------------------RVLKPE------------EILHFKNGITLDGLVGVPT 191 (429) Q Consensus 152 ~~~~~~~~~~~~g~~----------------------------~~~~~~------------evih~~~~~~~~~~~G~s~ 191 (429) ......++...++.. ...... .++.+- +.+...|.|- T Consensus 150 ~~~~i~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pvv---~~~N~~g~gd 226 (456) T protein:vir:10 150 IRAAMRWWRDLDAESDFAIVWSGDGWQKFARPCFVQSSSRRRLVTRISDSWVPVGDAVVTGSPPPVV---VYQNPDGMGE 226 (456) T ss_pred eEEEEEEEEecCCceeEEEEEeccceeEEEEEEEEeecccceeeeecCCceeeccccCCCCCceeEE---EecCCCCCch Confidence 111111111111100 000000 011110 1123468888 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHccCCcceEEEeCCC---CCHHHHHHH--HHHHHHHhcccccccceeecCCCceeEec Q lcl|Aclame:pro 192 MEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGD---LNEDAKKVF--RENFESMSSGLQNSHRIALMPVGYQFQPI 266 (429) Q Consensus 192 ~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~---~~~e~~~~~--~~~~~~~~~g~~~~~~~~vl~~g~~~~~~ 266 (429) ++.....++....+.-......+..+.|.-++..... ..++.-+.+ ...|.. ..+.++.++++.++.++ T Consensus 227 ~e~vi~liDa~~~~~s~~~~~~~~~a~~~~~i~G~~~~~~~~d~~g~~~~~~~~~~~------~~~~~~~~~~~~~~~q~ 300 (456) T protein:vir:10 227 VEPHIDIINRINRAELQLLSTMAIQAFRQRALKSTEHGLPNVDENGNAIDYASIFEA------APGALWELPPGVDIWES 300 (456) T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHhhhHhHhhhccCcccccccccccccchhhhhhh------hccccccCCCCcceEEe Confidence 8877776666655544433333433444333321110 111111111 112222 12446677889998877 Q ss_pred CCChhHHHHHHHHHHHHHHHHHHhcCChhhcCCccccccccHHHHHHHHHHHHHhHHHHHHHHHHHHhh-------ccch Q lcl|Aclame:pro 267 SLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKATLNNIEQQQQQFYTDTLQATLTMYEQEMTYKL-------FLDS 339 (429) Q Consensus 267 ~~~~~d~~~~e~~~~~~~~Ia~~fgvp~~~l~~~~~~~~~n~~~~~~~~~~~~l~P~~~~i~~~l~~~l-------l~~~ 339 (429) +...-+ .+.+..+..+.+|+..-++|+..+++... |.......+....+.-.+...+..|...+ +.-. T Consensus 301 ~~~~~~-~~~~~l~~~i~~~~~~s~~p~~~~~~~~~----N~Sg~Ai~~~~~~l~~k~~~~~~~f~~~l~~~~rl~~~~~ 375 (456) T protein:vir:10 301 QANDFT-PMLSAIKEHIRQLSSATKTPLPMLMPDSA----NQSAEGAHNIEKGFLFKCEDRLSIAKIGLEAILVKALQIE 375 (456) T ss_pred cccChh-HHHHHHHHHHHHHHhccCCChHHhccccc----ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc Confidence 644322 37888999999999999999999876331 11111112222222222222222222111 0000 Q ss_pred hhcchhhhhhhhhhHhhhhHHHHHHHHHHHHhCCCCCHHHHHHHhCCCCCC----CcceeeeccccccccccccccCCCC Q lcl|Aclame:pro 340 ELDKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEA----GGDRLLVNGNMLPIDMAGQAYLKGG 415 (429) Q Consensus 340 ~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~Gl~~~~----~gD~~~~~~n~~~~~~~~~~~~~~g 415 (429) +......+++.+......+..+.++++.++..+|+++..-+++++|+.+.+ ..+...-..+ .......+.+ T Consensus 376 g~~~~~~~~v~w~~~~~~~~~~~ada~~kl~~~gi~~~~~~~~~lg~~~~~i~~~e~er~~~e~~-----~~~~~~~~~~ 450 (456) T protein:vir:10 376 GESVEDTVDVSFESPDRVTLGEKYSAASLAKAAGESWASIRRNILNYNADQIKQDDLDRAREQIT-----LFAGNPVQRP 450 (456) T ss_pred CCCcccceeEEecCCCCcCHHHHHHHHHHHHHcCCChHHHHHhhCCCCHHHHHHHHHHHHHHHHH-----HHhhhhhhcC Confidence 011111233333445667888999999999999999888888999987531 1111100000 0000000101 Q ss_pred CCCCCCCC Q lcl|Aclame:pro 416 DTNGEVSK 423 (429) Q Consensus 416 ~~~~~~~~ 423 (429) +.++. . T Consensus 451 ~~~~~--~ 456 (456) T protein:vir:10 451 QEDGS--R 456 (456) T ss_pred CCCCC--C Confidence 11110 0 No 171 >protein:vir:96494 Length: 501 # NCBI annotation: portal protein # Family: family:all:125 # MgeID: mge:1620 # MgeName: 2972 # Cross-refs: genbank:acc:YP_238488;genbank:gi:66391764;genbank:GeneID:5176916 Probab=98.73 E-value=7.7e-08 Score=59.57 Aligned_cols=402 Identities=11% Similarity=0.049 Sum_probs=185.4 Q ss_pred Cch---hhhhhcccccccccccccCCchHHHHHhh-cCCCCcc-------eechhhhhccHHHHHHHHHHHHhhccCceE Q lcl|Aclame:pro 1 MDS---VKKFFNFEKRQTSQVIELNKDDEKLLEWL-GISPSTI-------SVKGKNALKVATVFACIKILSESVSKLPLK 69 (429) Q Consensus 1 Mg~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-------~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~ 69 (429) +.. +.++....+..... ....+.++. |...... ...+..-+..+....+|+..+..+-+-|+. T Consensus 38 ~~~~~~i~~~i~~~~~~~~~------r~~~~~~yY~g~~~~i~~~~~~~~~~~~~~ri~~n~~k~Ivd~~~~yl~g~p~~ 111 (501) T protein:vir:96 38 VNNWELLKNFINHHKLRQAP------RIQELLDYARGENHDVLKSGRRKDNEMADKRAVHNYGRMISKFKTGYLAGNPIR 111 (501) T ss_pred CChHHHHHHHHHHHHHHHHH------HHHHHHHHhcCCCCcccCccccCccccccceeecchHHHHHHHHhhhhcccCee Confidence 111 11111100000000 000011111 1100000 000001123456677788888888777877 Q ss_pred EEecCCceeeeeecchhhhhhcccCcCCCCHHHHHHHHHHHHHhhCCeEEEEeeCCCCceEEEEeeCCcceEEEEcCCcc Q lcl|Aclame:pro 70 IYQEDEYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVYIDDVGL 149 (429) Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~l~~~PN~~~s~~~~~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~l~p~~v~~~~~~~~~ 149 (429) +...+++.. ..+...|+ +....-........+..+++.+|.+|+.+.++.+|.+ .+..++|..+.++.+.... T Consensus 112 ~~~~~~~~~-----~~~~~~l~-~~~~~n~~~~~~~~~~~~~~~~G~a~~~v~~dedg~~-~i~~~~p~~~~~v~d~~~~ 184 (501) T protein:vir:96 112 VEYDDNDDN-----SQNDDAIK-RIGRINDLDSLNRTLIRDLSQTGRAYEVIYRSEYDET-RIKRLSPLETFVIYDNSLE 184 (501) T ss_pred EeeCCccch-----hHHHHHHH-HHHHhcCHHHHHHHHHHHHhhcCeEEEEEEEcCCCce-EEEEEccceeEEEEcCCCC Confidence 755443211 22333332 2333345567888899999999999999999888865 5777899999888875321 Q ss_pred e-eeeeeEEEee-cccCce---EEEccce------------------------EEEeecCCCCCcccccCHHHHHHHHHH Q lcl|Aclame:pro 150 L-NSKTKMWYVV-NTGGQQ---RVLKPEE------------------------ILHFKNGITLDGLVGVPTMEYLKSTLE 200 (429) Q Consensus 150 ~-~~~~~~~~~~-~~~g~~---~~~~~~e------------------------vih~~~~~~~~~~~G~s~~~~~~~~i~ 200 (429) . ......+|.. ...+.. ..++++. |++++ +...|.|.+..+...++ T Consensus 185 ~~~~~~v~~~~~~~~~~~~~~~~vyt~~~i~~~~~~~~~~~~~~~~~~~g~vPvv~~~-----nn~~g~sd~e~v~~liD 259 (501) T protein:vir:96 185 DNSIAAVRYYNRGTLQSAKDVVEIYTDEHIYTLDASDDFNEISVTTHAFGTVPITEYL-----NNIDGIGDYETELYLID 259 (501) T ss_pred CceEEEEEEEEeecCCCcEEEEEEEcCCcEEEEeeCCCceeccccccCCCccceEEec-----CCccCCCchhhhHHHHH Confidence 1 1111111111 111110 1122222 33332 12468888888888888 Q ss_pred HHHHHHHHHHHHHHccCCcceEEEeCCCCC-HHHHHHHHHHHHHHhcccccccceeecCCCceeEecCCChhHHHHHHHH Q lcl|Aclame:pro 201 NSASADKFINNFYKQGLQVKGLVQYVGDLN-EDAKKVFRENFESMSSGLQNSHRIALMPVGYQFQPISLNMSDAQFLENT 279 (429) Q Consensus 201 ~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~-~e~~~~~~~~~~~~~~g~~~~~~~~vl~~g~~~~~~~~~~~d~~~~e~~ 279 (429) ....+.....+.++..+.|-.++.-..... ++....++. ...-.....+.....+.+.++..+.....+..+.... T Consensus 260 a~d~~~s~~~~~~~~~~~~~l~i~G~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 336 (501) T protein:vir:96 260 LYDSAESDTANHMSDMADAILAIYGDLALPKGMQASDMKR---TRLMQLKPPKSADGKEGTVKAEYLTKSYDVSGAEAYK 336 (501) T ss_pred HHHHHHHHHHHHHHHhcCceeeeecccccCcccchhhhhh---cCeeeecccccccccccCcceeeEeccCCHHHHHHHH Confidence 777777777777777777766665332221 222222111 0000001111111223344444444333344456777 Q ss_pred HHHHHHHHHHhcCChhhcCCc-cccccccHH----------HHHHHHHHHHHhHHHHHHHHHHHHhhccchhhcchhhhh Q lcl|Aclame:pro 280 ELTIRQIATAFGIKMHQLNDL-SKATLNNIE----------QQQQQFYTDTLQATLTMYEQEMTYKLFLDSELDKGFYSK 348 (429) Q Consensus 280 ~~~~~~Ia~~fgvp~~~l~~~-~~~~~~n~~----------~~~~~~~~~~l~P~~~~i~~~l~~~ll~~~~~~~~~~~~ 348 (429) +...+.|+..-++|....+.. +..++...+ ......+..++.-+++.+..-+...--........+.+. T Consensus 337 ~~l~~~I~~~s~~p~~~~~~~~~n~Sg~Al~~~~~~l~~ka~~~~~~~~~~l~~~~~li~~~~~~~~~~~~~d~~~i~i~ 416 (501) T protein:vir:96 337 TRLNRDIHIFTNTPDMSDTNFSGNTSGEALKYKLFGLDQDRVDTQSQFTKGLKRRYRLAARIGSLVNEFKDFDESLLKIT 416 (501) T ss_pred HHHHHHHHHHhCCcccCcccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccceEE Confidence 888888888888886554332 111111111 112234444455555544444332211111111223344 Q ss_pred hhhhhHhhhhHHHHHHHHHHHHhCCCCCHHHHHHHhCCCCCCC--cceeeecccccccc---ccccc-cCCCCCCCCCCC Q lcl|Aclame:pro 349 FNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEAG--GDRLLVNGNMLPID---MAGQA-YLKGGDTNGEVS 422 (429) Q Consensus 349 fd~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~Gl~~~~~--gD~~~~~~n~~~~~---~~~~~-~~~~g~~~~~~~ 422 (429) | ...+..+..+.++.+.++ .|+++..-+.+++++-..|. .+.+ -.-....+ ..++. ...+...+.+.+ T Consensus 417 f--~~~~p~n~~e~ad~~~kl--~g~iS~et~~~~l~~v~D~~~E~~ri--~~E~~~~~~~~~~~~~~~~~~~~~~~~~e 490 (501) T protein:vir:96 417 F--TPNLPKSLNEQVSILTGL--GGQVSQETALSLSGLVESPNEELDKI--NKEMSEIDFKGYSNDFNEHVGKYTDEVKE 490 (501) T ss_pred e--CCCCCcCHHHHHHHHHHH--hccCchHHHHHhCCCCCCHHHHHHHH--HHHHHHhhccccccchhhcccccCCcCCC Confidence 4 555788899999988888 48898888888886633221 1111 00000000 00010 111112222222 Q ss_pred CCCCCCC Q lcl|Aclame:pro 423 KEGNEGN 429 (429) Q Consensus 423 ~~~~~~n 429 (429) .+++++- T Consensus 491 ~~~d~~e 497 (501) T protein:vir:96 491 THTDDFE 497 (501) T ss_pred CCCCccc Confidence 3333332 No 172 >protein:vir:8184 Length: 474 # NCBI annotation: gp4 # Family: family:all:524 # MgeID: mge:153 # MgeName: Che9d # Cross-refs: genbank:acc:NP_817977;genbank:gi:29566411;genbank:GeneID:2700965 Probab=98.73 E-value=3e-08 Score=61.81 Aligned_cols=398 Identities=5% Similarity=-0.089 Sum_probs=166.8 Q ss_pred CchhhhhhcccccccccccccCCchHHHHHhhcCCCC--cceechhhhh-----ccHHHHHHHHHHHHhhccCceEEEec Q lcl|Aclame:pro 1 MDSVKKFFNFEKRQTSQVIELNKDDEKLLEWLGISPS--TISVKGKNAL-----KVATVFACIKILSESVSKLPLKIYQE 73 (429) Q Consensus 1 Mg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~a~-----~~~~v~~~i~~ia~~ia~~~~~~~~~ 73 (429) +.++..+.....+.... ...+-++...... ..+.+....+ -.....-||+.+++.+.--.|.+ T Consensus 17 ~~~~~~L~~~~~~~~~~-------~~~~~~Yy~G~~~~~~~~~~~p~~~r~~~~v~nw~~~~Vd~~a~rl~~~Gf~~--- 86 (474) T protein:vir:81 17 NALINGLLAQIENLRWK-------NLLRTSYYENKRTIQYVGTLIPPQYFNLGLVLGWTGKAVDALARRCNLEGFVW--- 86 (474) T ss_pred HHHHHHHHHHHHHHhhH-------HHHHHHHhccCCChhhccccccHHHHHHHhhcChHHHHHHHHHhhhcccceEC--- Confidence 22222222211111000 0000011100000 0111111111 12333445666665444344432 Q ss_pred CCceeeeeecchhhhhhcccCcCCCCHHHHHHHHHHHHHhhCCeEEEEeeCCCCce-EEEEeeCCcceEEEEcCCcceee Q lcl|Aclame:pro 74 DEYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKV-QALWPIDASKVTVYIDDVGLLNS 152 (429) Q Consensus 74 ~~~~~~~~~~~~~~~~l~~~PN~~~s~~~~~~~~~~~~l~~G~~~~~~~~~~~g~~-~~l~~l~p~~v~~~~~~~~~~~~ 152 (429) .++. .....+..++. -|. .......+..+.+.+|.+|+.+..+.+|.+ ..+.+++|..+.+.+|....... T Consensus 87 ~d~~---~~~~~l~~iw~--~N~---ld~~~~~~~~~al~~G~sf~~V~~~~d~~~~~~i~~~sp~~~~~~~D~~~~~~~ 158 (474) T protein:vir:81 87 PDGD---LDSLGGTEVVD--DNH---LLSEIDSAIVAAMQHGPAFLINTVGEDDEPEALIHVKDASEATGEWNRRRRGLN 158 (474) T ss_pred CCCC---ccchHHHHHHH--hcC---hhHHHHHHHHHHHhhCceeEEEecCCCCCceeEEEEeccceEEEEEeCCCCcce Confidence 1110 01122333332 222 234556778899999999999988777764 46778899988877764322111 Q ss_pred eeeEEEeecccCceE---EEccc-------------------------eEEEeecCCCCCcccccCHH-HHHHHHHHHHH Q lcl|Aclame:pro 153 KTKMWYVVNTGGQQR---VLKPE-------------------------EILHFKNGITLDGLVGVPTM-EYLKSTLENSA 203 (429) Q Consensus 153 ~~~~~~~~~~~g~~~---~~~~~-------------------------evih~~~~~~~~~~~G~s~~-~~~~~~i~~~~ 203 (429) .....+....+|... .+.++ .|++|.+.......+|.|-+ +.+...++... T Consensus 159 ~al~~~~~~~~g~~~~~~ly~~~~~~~~~~~~~~~~w~~~~~~~~~gvPvV~~~n~~~~~~~~G~s~i~e~v~~l~da~~ 238 (474) T protein:vir:81 159 NLLSIIDKDKEGKVLSLALYLDNETVTAQRDKATLKWQVDRDEHVYGVPAQVLPYKPAPKRPFGQSRITKPMMGLQDAGV 238 (474) T ss_pred eeeEEEEEcCCCcEEEEEEEeCCcEEEEEEcCccceeeeccCCCCCCcceEEecccccccCcCCccccchhHHHHHHHHH Confidence 111111122222110 11111 25666544444555788754 23333333333 Q ss_pred HHHHHHHHHHHccCCcceEEE-eCCCC-CH---HHHHHHHHHHHHHhcccccccceeecCCCceeEecCCChhHHHHHHH Q lcl|Aclame:pro 204 SADKFINNFYKQGLQVKGLVQ-YVGDL-NE---DAKKVFRENFESMSSGLQNSHRIALMPVGYQFQPISLNMSDAQFLEN 278 (429) Q Consensus 204 ~~~~~~~~~~~ng~~~~~~~~-~~~~~-~~---e~~~~~~~~~~~~~~g~~~~~~~~vl~~g~~~~~~~~~~~d~~~~e~ 278 (429) ...-......+-.+.|.-++. ..... .+ +....++..+...+.-..+...-.....+.++.++....-+ .|++. T Consensus 239 r~~~~~~~~~e~~a~pqr~i~G~~~~~~~d~d~~~~~~~~~~~~~i~~~~~d~d~~~~~~~~~~~~q~~~a~l~-~~~~~ 317 (474) T protein:vir:81 239 RELARREGHMDVFSYPEFWLLGADESALKNADGTIKSVWEARLGRIKGLPDDADADIPQLARADVKQFPAASPD-AHWSD 317 (474) T ss_pred HHHHHHHHHHHHhcchhheeecCChhhcccccccccchhhhhHHHHhcCCCcccccccccccccccccCCCChh-HHHHH Confidence 333333333333444544443 22111 11 11122333332222111111111111234666666544322 27899 Q ss_pred HHHHHHHHHHHhcCChhhcCCccccccccHHHH---HHHHHHHHHhHHHHHHHHHHHHhhccchhh----------cchh Q lcl|Aclame:pro 279 TELTIRQIATAFGIKMHQLNDLSKATLNNIEQQ---QQQFYTDTLQATLTMYEQEMTYKLFLDSEL----------DKGF 345 (429) Q Consensus 279 ~~~~~~~Ia~~fgvp~~~l~~~~~~~~~n~~~~---~~~~~~~~l~P~~~~i~~~l~~~ll~~~~~----------~~~~ 345 (429) ++..+..+|..-|+|+..||.....|-++.+.. ...+... +.-..+.|...+.+-+-.-... .... T Consensus 318 l~~~~~~~a~~t~iP~~~lG~~~~~np~SaeAi~a~~~~l~~k-ae~k~~~fg~~l~~~~rla~~i~~~~~~~~~~~~~~ 396 (474) T protein:vir:81 318 INGLAKLFAREASLPDTAVAISGLSNPTSAESYDASQYELIAE-AEGAVDDFTPALRKAFIRALAMKNKVAIDEIPDEWK 396 (474) T ss_pred HHHHHHHHHhhhCCCHHHhcccccccccHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhCCCCccccchhhc Confidence 999999999999999999985433332322222 2222111 1112222222222211100000 0112 Q ss_pred hhhhhhhhHhhhhHHHHHHHHHHHHhCCC--CCHHHHHHHhCCCCCC---CcceeeeccccccccccccccCCCCCCCCC Q lcl|Aclame:pro 346 YSKFNVDAILRADIKTRYEAYRTGIQGGF--LKPNEARSKEDLPPEA---GGDRLLVNGNMLPIDMAGQAYLKGGDTNGE 420 (429) Q Consensus 346 ~~~fd~~~l~~~d~~~~~~~~~~~~~~g~--~t~NE~R~~~Gl~~~~---~gD~~~~~~n~~~~~~~~~~~~~~g~~~~~ 420 (429) .+++.+.+....+..+.+.++.+++++|. .+..=+++++|+.+.+ ..+.-.......+++........+ ...| T Consensus 397 ~~~v~W~d~~~~s~a~~aDa~~Kl~~a~~~~~~~~~~~~~lg~t~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~--~~aq 474 (474) T protein:vir:81 397 SIDAKWRDPRYLSKSAQADAGMKQLAAVPWLAETEVGLELIGLTPQQARRAMADKRRVQGRGTLQALIDRSNNG--ATAQ 474 (474) T ss_pred cceeEecCCCccCHHHHHHHHHHHHhcccCCCcHHHHHhhcCCCHHHHHHHHHHHHHHhHHHHHHHHHhcCCCC--CCCC Confidence 23333334456678899999999999874 3334468889998642 111111111122233221111111 0111 No 173 >protein:vir:103951 Length: 511 # NCBI annotation: phage portal protein # Family: family:all:125 # MgeID: mge:1662 # MgeName: phiNM # Cross-refs: genbank:acc:YP_873988;genbank:gi:118430763;genbank:GeneID:4525445 Probab=98.72 E-value=5.2e-08 Score=60.51 Aligned_cols=412 Identities=9% Similarity=0.029 Sum_probs=183.0 Q ss_pred CchhhhhhcccccccccccccCCchHHHHHhhcCCCCcc-----eec---hhhhhccHHHHHHHHHHHHhhccCceEEEe Q lcl|Aclame:pro 1 MDSVKKFFNFEKRQTSQVIELNKDDEKLLEWLGISPSTI-----SVK---GKNALKVATVFACIKILSESVSKLPLKIYQ 72 (429) Q Consensus 1 Mg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~---~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~ 72 (429) |...+.+.+...+......+ .-..+.++.-+..... ... ...=+........++..+..+-+-|+.+.. T Consensus 39 ~~~~~~i~~~i~~~~~~~~~---r~~~l~~Yy~g~~~i~~~~~~~~~~~~~~~ki~~n~~k~Iv~~~~~yl~g~p~~~~~ 115 (511) T protein:vir:10 39 LQNVNEVSKCIEHHMDYQRP---RLKVLSDYYEGKTKNLVELTRRKEEYMADNRVAHDYASYISDFINGYFLGNPIQYQD 115 (511) T ss_pred ccCHHHHHHHHHHHHHhhHH---HHHHHHHHhcccCccccccCcccccccCcceeecchHHHHHHHHhhhhcccCceeec Confidence 11111111110000000000 0000111111000000 000 000011345566777777777777877643 Q ss_pred cCCceeeeeecchhhhhhcccCcCCCCHHHHHHHHHHHHHhhCCeEEEEeeCCCCceEEEEeeCCcceEEEEcCCcceee Q lcl|Aclame:pro 73 EDEYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVYIDDVGLLNS 152 (429) Q Consensus 73 ~~~~~~~~~~~~~~~~~l~~~PN~~~s~~~~~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~l~p~~v~~~~~~~~~~~~ 152 (429) .+++ ....+..++. .-........+..+++.+|.+|.++..+.+|.+ .+.+++|..+.++.++...... T Consensus 116 ~d~~-----~~~~l~~~~~-----~n~~~~~~~~~~~~~~i~G~ay~~vy~dedg~~-~i~~~~p~~~~~vydd~~~~~~ 184 (511) T protein:vir:10 116 DDKD-----VLEAIEAFND-----LNDVESHNRSLGLDLSIYGKAYEIMIRNQDDET-RLYKSDAMSTFVIYDNTIERNS 184 (511) T ss_pred CchH-----HHHHHHHHHh-----hcCHHHHHHHHHHHHHhcCeeEEEEEeCCCCce-EEEEEccceeEEEEcCCCCCce Confidence 3221 1122333332 123445667788899999999999999888865 5777889888887765432111 Q ss_pred -eeeEEEee-cccC---c----eEEEccceEEEeecCC----------------C---------CCcccccCHHHHHHHH Q lcl|Aclame:pro 153 -KTKMWYVV-NTGG---Q----QRVLKPEEILHFKNGI----------------T---------LDGLVGVPTMEYLKST 198 (429) Q Consensus 153 -~~~~~~~~-~~~g---~----~~~~~~~evih~~~~~----------------~---------~~~~~G~s~~~~~~~~ 198 (429) ....+|.. ..++ . ...+.+..+.++.... + .+...|.|-++.+... T Consensus 185 ~~~vr~~~~~~~d~~~~~~~~~~~iyt~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~vPvv~f~nn~~g~gd~e~v~~l 264 (511) T protein:vir:10 185 IAGVRYLRTKPIDKTDEDEVFTVDLFTSHGVYRYLTSRTNGLKLTPRENGFESHSFERMPITEFSNNERRKGDYEKVITL 264 (511) T ss_pred EEEEEEEEeeecccCccceEEEEEEEeCCcEEEEEecCCCcccccccccccccccCcceeEEEecCCCCCCCchhhhHHH Confidence 11111111 0000 0 0123333343332100 0 0123578888888888 Q ss_pred HHHHHHHHHHHHHHHHccCCcceEEEeCCCCCHHHHHHHHHHHHHHhcccccc-cceeecCCCceeEecCCChhHHHHHH Q lcl|Aclame:pro 199 LENSASADKFINNFYKQGLQVKGLVQYVGDLNEDAKKVFRENFESMSSGLQNS-HRIALMPVGYQFQPISLNMSDAQFLE 277 (429) Q Consensus 199 i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~g~~~~-~~~~vl~~g~~~~~~~~~~~d~~~~e 277 (429) ++....+.....+.++..+.|-.+++-....++++..+..+.-.-........ +...-.++|.++..+........+.. T Consensus 265 iDa~d~~~S~~~~~~~~~~~~~lv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~e~ 344 (511) T protein:vir:10 265 IDLYDNAESDTANYMSDLNDAMLLIKGNLNLDPVEVRKQKEANVLFLEPTVYADSEGRETEGSVDGGYIYKQYDVQGTEA 344 (511) T ss_pred HHHHHHHHHHHHHHHHHhhCceeeeeccccCCchhhccchhccceecccccccccccccCCCCcceeEEeecCCHHHHHH Confidence 88777666666666777777766666544444444333222111111100000 11112234555555554444455667 Q ss_pred HHHHHHHHHHHHhcCChhhcCCc-cccccccH----------HHHHHHHHHHHHhHHHHHHHHHHHHhhccchhhcchhh Q lcl|Aclame:pro 278 NTELTIRQIATAFGIKMHQLNDL-SKATLNNI----------EQQQQQFYTDTLQATLTMYEQEMTYKLFLDSELDKGFY 346 (429) Q Consensus 278 ~~~~~~~~Ia~~fgvp~~~l~~~-~~~~~~n~----------~~~~~~~~~~~l~P~~~~i~~~l~~~ll~~~~~~~~~~ 346 (429) ..+...+.|+..-++|....+.. +..++-.. .......+...+.-+++.|...+..+--.... ..-.. T Consensus 345 ~~~~L~~~I~~~s~~P~~~~~~~~~n~Sg~Al~~~~~~l~~k~~~k~~~f~~~l~~~~~li~~~~~~~~~~~~~-~d~~~ 423 (511) T protein:vir:10 345 YKDRLNSDIHMFTNTPNMKDDNFSGTQSGEAMKYKLFGLEQRTKTKEGLFTKGLRRRAKLLETILKNTRSIDAN-KDFNT 423 (511) T ss_pred HHHHHHHHHHHHhCCcccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCcccc-cccce Confidence 78888888988888877544322 11111111 11223444445555555555444332110000 00012 Q ss_pred hhhhhhhHhhhhHHHHHHHHHHHHhCCCCCHHHHHHHhCCCCCCC--cceeeecc-ccccccccccccCCCCCCCCCCCC Q lcl|Aclame:pro 347 SKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEAG--GDRLLVNG-NMLPIDMAGQAYLKGGDTNGEVSK 423 (429) Q Consensus 347 ~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~Gl~~~~~--gD~~~~~~-n~~~~~~~~~~~~~~g~~~~~~~~ 423 (429) +++.+..-+..|..+.++.+.++ .|+++..-+.+++++-+.|. .+.+-.-. ...+..........++.++++.+. T Consensus 424 i~i~f~~~~p~d~~~~~~~~~kl--~G~iS~et~~~~l~~v~d~~~E~~ri~~E~~~~~~~~~~~~~~~~~~~~~~~~~~ 501 (511) T protein:vir:10 424 VRYVYNRNLPKSLIEELKAYIDS--GGKISQTTLMSLFSFFQDPELEVKKIEEDEKESIKKAQKGIYKDPRDINDDEQDD 501 (511) T ss_pred eeEEeCCCCCcCHHHHHHHHHHH--hccCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhhhcccCCCCCCCCCCCC Confidence 34444556788899999998888 48899888888887643221 11110000 000000000000111111111111 Q ss_pred CCCCCC Q lcl|Aclame:pro 424 EGNEGN 429 (429) Q Consensus 424 ~~~~~n 429 (429) ++.+.. T Consensus 502 ~~~~~~ 507 (511) T protein:vir:10 502 DTKDTV 507 (511) T ss_pred cccCcc Confidence 111111 No 174 >protein:vir:96240 Length: 511 # NCBI annotation: ORF006 # Family: family:all:125 # MgeID: mge:1607 # MgeName: 69 # Cross-refs: genbank:acc:YP_239567;genbank:gi:66395299;genbank:GeneID:5132789 Probab=98.71 E-value=4.3e-08 Score=60.98 Aligned_cols=411 Identities=9% Similarity=0.033 Sum_probs=183.3 Q ss_pred Cchhhhhhc-------------------------ccccccccccccCCchHHHHHhhcCCCCcc-----ee---chhhhh Q lcl|Aclame:pro 1 MDSVKKFFN-------------------------FEKRQTSQVIELNKDDEKLLEWLGISPSTI-----SV---KGKNAL 47 (429) Q Consensus 1 Mg~~~~~~~-------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~---~~~~a~ 47 (429) -|=++..|+ +..+......+ ....+.++.-...... .. -+..=+ T Consensus 14 ~~~~~~~~~~~~n~~~~~~~~e~~~~~~~~~i~~~i~~~~~~~~~---r~~~l~~Yy~g~~~i~~~~~~~~~~~~~~~ki 90 (511) T protein:vir:96 14 RGNINYLFNDEANVVYTYDGTESDLLQNVNEVSKYIEHHMDYQRP---RLKVLSDYYEGKTKNLVELTRRKEEYMADNRV 90 (511) T ss_pred hhhhhhhhhhhhCCccccchhhhhhhccHHHHHHHHHHHHHhhHH---HHHHHHHHhcccCccccccCcCcccccCccee Confidence 111111111 00000000000 0000111110000000 00 000001 Q ss_pred ccHHHHHHHHHHHHhhccCceEEEecCCceeeeeecchhhhhhcccCcCCCCHHHHHHHHHHHHHhhCCeEEEEeeCCCC Q lcl|Aclame:pro 48 KVATVFACIKILSESVSKLPLKIYQEDEYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKG 127 (429) Q Consensus 48 ~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~~~~~~~~~~~~~l~~~PN~~~s~~~~~~~~~~~~l~~G~~~~~~~~~~~g 127 (429) ........++..+..+-+-|+.+...+++ ....+..++ ..-........+..+++.+|.+|.++.++.+| T Consensus 91 ~~n~~k~Iv~~~~~yl~g~p~~~~~~~~~-----~~~~l~~~~-----~~n~~~~~~~~~~~~~~i~G~a~~~vy~ded~ 160 (511) T protein:vir:96 91 AHDYASYISDFINGYFLGNPIQYQDDDKD-----VLEAIEAFN-----DLNDVESHNRSLGLDLSIYGKAYELMIRNQDD 160 (511) T ss_pred ecchHHHHHHHHHhhhccCCceeecCchH-----HHHHHHHHH-----hhcCHHHHHHHHHHHHHhcCeeEEEEEeCCCC Confidence 13455667777787777888777433221 112223333 22345666777888999999999999998888 Q ss_pred ceEEEEeeCCcceEEEEcCCccee-eeeeEEEee-cccC---c----eEEEccceEEEeecCC----------------C Q lcl|Aclame:pro 128 KVQALWPIDASKVTVYIDDVGLLN-SKTKMWYVV-NTGG---Q----QRVLKPEEILHFKNGI----------------T 182 (429) Q Consensus 128 ~~~~l~~l~p~~v~~~~~~~~~~~-~~~~~~~~~-~~~g---~----~~~~~~~evih~~~~~----------------~ 182 (429) .+ .+.+++|..+.++.+...... .....+|.. ..++ . ...+++..+.++.... + T Consensus 161 ~~-~i~~~~p~~~~~vydd~~~~~~~~~vr~~~~~~~d~~~~~~~~~~~iyt~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 239 (511) T protein:vir:96 161 ET-RLYKSDAMSTFVIYDNTIERNSIAGVRYLRTKPIDKTDEDEVFTVDLFTSHGVYRYLTSRTNGLKLTPRENGFESHS 239 (511) T ss_pred ce-EEEEEccceeEEEEcCCCCCceEEEEEEEEeeeccccccceEEEEEEEeCCcEEEEEecCCCccccccccccccccc Confidence 64 677889999888776532211 111111111 0010 0 0123333333332100 0 Q ss_pred ---------CCcccccCHHHHHHHHHHHHHHHHHHHHHHHHccCCcceEEEeCCCCCHHHHHHHHHHHHHHhccccc-cc Q lcl|Aclame:pro 183 ---------LDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGDLNEDAKKVFRENFESMSSGLQN-SH 252 (429) Q Consensus 183 ---------~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~g~~~-~~ 252 (429) .+...|.|-++.+...++....+.....+.++..+.|-.+++-....+.++.....+.-.-....... .+ T Consensus 240 ~~~vPvv~~~nn~~g~gd~e~v~~liDa~d~~~S~~~~~~~~~~~~~lv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (511) T protein:vir:96 240 FERMPITEFSNNERRKGDYEKVITLIDLYDNAESDTANYMSDLNDAMLLIKGNLNLDPVEVRKQKEANVLFLEPTVYADS 319 (511) T ss_pred CCceeeEEecCCCCCCCchhhhHHHHHHHHHHHHHHHHHHHHhhCceeeeecCccCCchhhcccccccceeccccccccc Confidence 01235888888888888877777766677777777776666654444443332222111000000000 01 Q ss_pred ceeecCCCceeEecCCChhHHHHHHHHHHHHHHHHHHhcCChhhcCCc-cccccccHH----------HHHHHHHHHHHh Q lcl|Aclame:pro 253 RIALMPVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDL-SKATLNNIE----------QQQQQFYTDTLQ 321 (429) Q Consensus 253 ~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~fgvp~~~l~~~-~~~~~~n~~----------~~~~~~~~~~l~ 321 (429) ...-.+++.++..+........+....+...+.|+..-++|....... +..++...+ ......+..++. T Consensus 320 ~~~~~~~~~~~~~l~~~~~~~~~e~~~~~L~~~I~~~s~~p~~~~~~~~~n~Sg~Al~~~~~~l~~k~~~k~~~~~~~l~ 399 (511) T protein:vir:96 320 EGRETEGSVDGGYIYKQYDVQGTEAYKDRLNSDIHMFTNTPNMKDDNFSGTQSGEAMKYKLFGLEQRTKTKEGLFTKGLR 399 (511) T ss_pred ccccCCCCcceeEEeecCCHHHHHHHHHHHHHHHHHHhCCcccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHH Confidence 111123445555444444445566778888899999888887554322 111111111 122344444555 Q ss_pred HHHHHHHHHHHHhhccch-hhcchhhhhhhhhhHhhhhHHHHHHHHHHHHhCCCCCHHHHHHHhCCCCCCC--cceeeec Q lcl|Aclame:pro 322 ATLTMYEQEMTYKLFLDS-ELDKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEAG--GDRLLVN 398 (429) Q Consensus 322 P~~~~i~~~l~~~ll~~~-~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~Gl~~~~~--gD~~~~~ 398 (429) -+++.|...+..+.-... .... .+++.+..-+..|..+.++.+.++ .|+++...+.+++++-+.+. .+.+..- T Consensus 400 ~~~~li~~~~~~~~~~~~~~d~~--~i~~~f~~~~p~n~~e~~~~~~kl--~G~iS~et~l~~l~~v~D~~~E~~ri~~E 475 (511) T protein:vir:96 400 RRAKLLETILKNTWSIDANKDFN--TVRYVYNRNLPKSLIEELKAYIDS--GGKISQTTLMSLFSFFQDPELEVKKIEED 475 (511) T ss_pred HHHHHHHHHHHhhcCcccccccc--cceEEeCCCCCCCHHHHHHHHHHH--hccCChHHHHHhCCCCCCHHHHHHHHHHH Confidence 555555544433211110 0111 233334555678888888888887 68999999999887644321 1111000 Q ss_pred c-ccccccccccccCCCCCCCCCCC----CCCCCCC Q lcl|Aclame:pro 399 G-NMLPIDMAGQAYLKGGDTNGEVS----KEGNEGN 429 (429) Q Consensus 399 ~-n~~~~~~~~~~~~~~g~~~~~~~----~~~~~~n 429 (429) . ...+..........++.++++.+ ...++.. T Consensus 476 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 511 (511) T protein:vir:96 476 EKESIKKAQKGIYKDPRDINDDEQDDDTKDTVDKKE 511 (511) T ss_pred HHHHHHHHhhccccCCCCCCCCCCCCcccccccccC Confidence 0 00000000000111111111111 1111111 No 175 >protein:vir:3964 Length: 453 # NCBI annotation: putative portal protein # Family: family:all:125 # MgeID: mge:83 # MgeName: ul36 # Cross-refs: genbank:acc:NP_663672;genbank:gi:21716109;genbank:GeneID:951201 Probab=98.70 E-value=7.1e-08 Score=59.78 Aligned_cols=394 Identities=14% Similarity=0.048 Sum_probs=175.2 Q ss_pred Cch------------------hhhhhcccccccccccccCCchHHHHHhh-------cCCCCcceechhhhhccHHHHHH Q lcl|Aclame:pro 1 MDS------------------VKKFFNFEKRQTSQVIELNKDDEKLLEWL-------GISPSTISVKGKNALKVATVFAC 55 (429) Q Consensus 1 Mg~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~a~~~~~v~~~ 55 (429) |.. +.++......... ....+.++. ........ ....=+..+..... T Consensus 1 ~~~~~~~~~~~p~d~~~~~~~l~~~i~~~~~~~~-------r~~~~~~yy~g~~~i~~~~~~~~~-~~~~ki~~n~~~~i 72 (453) T protein:vir:39 1 MKYKPPKLMTFPKDEPITNEVVTKFMEKHRLEVA-------RYEYLKNMYRGIMAIDAEPTKDLW-KPDNRLTVNFTKYI 72 (453) T ss_pred CeecCCcceEcCCCCCCCHHHHHHHHHHHHHHHH-------HHHHHHHHhhccCchhcCCCcccc-CccceeecchHHHH Confidence 211 1221110000000 000000111 11000000 00000123556677 Q ss_pred HHHHHHhhccCceEEEecCCceeeeeecchhhhhhcccCcCCCCHHHHHHHHHHHHHhhCCeEEEEeeCCCCceEEEEee Q lcl|Aclame:pro 56 IKILSESVSKLPLKIYQEDEYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPI 135 (429) Q Consensus 56 i~~ia~~ia~~~~~~~~~~~~~~~~~~~~~~~~~l~~~PN~~~s~~~~~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~l 135 (429) |+..+..+-+-|+.+-..+++ ....+..++.. .........+..+.+.+|.||+++..+.+|.+ .+-.+ T Consensus 73 vd~~~~~l~g~~~~~~~~d~~-----~~~~l~~i~~~-----N~~~~~~~~~~~~~~~~G~~~~~v~~d~~g~~-~i~~~ 141 (453) T protein:vir:39 73 VDTFTGYFNGIPVKKSHSDKE-----TLSKLQEFDNL-----NDMEDEESELAKMACIYGRAFELLYQNEETQT-NVIYN 141 (453) T ss_pred HHHHhhhhcccCceeccCChH-----HHHHHHHHHHh-----cChhHHHHHHHHHHhhcCeEEEEEEecCCCce-EEEEE Confidence 888888777777766433321 11234444432 23445777788999999999999999888875 56677 Q ss_pred CCcceEEEEcCCcceeeeeeEEEeecccCce--EEEccceEEEeecC-----------CCC---------CcccccCHHH Q lcl|Aclame:pro 136 DASKVTVYIDDVGLLNSKTKMWYVVNTGGQQ--RVLKPEEILHFKNG-----------ITL---------DGLVGVPTME 193 (429) Q Consensus 136 ~p~~v~~~~~~~~~~~~~~~~~~~~~~~g~~--~~~~~~evih~~~~-----------~~~---------~~~~G~s~~~ 193 (429) +|..+.++.++...........+....+... ..+.+..+.++... ++. +...|.|-++ T Consensus 142 ~p~~~~~v~d~~~~~~~~~~ir~~~~~~~~~~~~~yt~~~i~~~~~~~~~~~~~~~~~~~~g~vPvv~~~n~~~g~sd~e 221 (453) T protein:vir:39 142 TPENMFMVYDDTIKQEPLFAVRYGYDDDYKLYGEVYTKETTYALNGTMGFYNMTEQAPNPFDDLPVVEFYFNEERMSIFE 221 (453) T ss_pred cccceEEEecCCCCCeEEEEEEEEEeCCeEEEEEEEeCCeEEEEEecCCceeeecccccCCCceeEEEecCCCCCCcchh Confidence 8888888776533211111111111111110 11222222222110 000 1235888888 Q ss_pred HHHHHHHHHHHHHHHHHHHHHccCCcceEEEeCCCCCHHHHHHHHHHHHHHhcccccccceeecCCCceeEecCCChhHH Q lcl|Aclame:pro 194 YLKSTLENSASADKFINNFYKQGLQVKGLVQYVGDLNEDAKKVFRENFESMSSGLQNSHRIALMPVGYQFQPISLNMSDA 273 (429) Q Consensus 194 ~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~g~~~~~~~~vl~~g~~~~~~~~~~~d~ 273 (429) .+...++..........+..+..+.|..+++- ....++....++.. ..-...+. ...--.++++|..... ... T Consensus 222 ~v~~liDa~~~~~s~~~~~~~~~~~p~~~~~g-~~~~~~~~~~~~~~---~~~~~~~~-~~~~~~~~~~~lt~~~--~~~ 294 (453) T protein:vir:39 222 SVISLVNAFNKAISEKANDVDYFSDQYLTFLG-AAVEEEDLKNIRSN---RVINYYGE-SSEAKNVDVKFLEKPD--SDS 294 (453) T ss_pred hhHHHHHHHHHHHHHHHHHHHHhhCceeeeec-CCCCchhhhhhhhc---ceeeecCC-CCCCCCCceeEEeecC--CHH Confidence 87777776666666666666666677666553 23444444333221 00000000 0000123445544333 334 Q ss_pred HHHHHHHHHHHHHHHHhcCChhhcCCccccccccHHH----------HHHHHHHHHHhHHHHHHHHHHHHhhccchhhcc Q lcl|Aclame:pro 274 QFLENTELTIRQIATAFGIKMHQLNDLSKATLNNIEQ----------QQQQFYTDTLQATLTMYEQEMTYKLFLDSELDK 343 (429) Q Consensus 274 ~~~e~~~~~~~~Ia~~fgvp~~~l~~~~~~~~~n~~~----------~~~~~~~~~l~P~~~~i~~~l~~~ll~~~~~~~ 343 (429) .+.+..+...+.|+..-++|..-....+..++...+. .....+..++..+++.+..-++.. ....... T Consensus 295 ~~~~~~~~l~~~I~~~s~~p~~~~~~~gn~Sg~Al~~~~~~l~~ka~~~~~~~~~~l~~~~~li~~~~~~~--~~~~~~~ 372 (453) T protein:vir:39 295 QTENLLDRLTKLIFQTTMVANISDESFGSSSGVSLAYKLQAMSNLALSFQRKFQSSLNSRYKLYCELSTNV--SNKEAWK 372 (453) T ss_pred HHHHHHHHHHHHHHHHhCCcccccccccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc--CCccccc Confidence 4556677778888888787653322222222211111 223444555555555555433321 1111122 Q ss_pred hhhhhhhhhhHhhhhHHHHHHHHHHHHhCCCCCHHHHHHHhCCCCCCCcceeeeccccccccccccccCCCCCCCCCCCC Q lcl|Aclame:pro 344 GFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEAGGDRLLVNGNMLPIDMAGQAYLKGGDTNGEVSK 423 (429) Q Consensus 344 ~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~Gl~~~~~gD~~~~~~n~~~~~~~~~~~~~~g~~~~~~~~ 423 (429) ...+.| ..-+..|..+.++.+.++ +|+++..-+.++++.-+.+..+.-.+.+--............+++..+ . T Consensus 373 ~i~v~f--~~~~p~~~~~~a~~~~kl--~g~is~et~l~~l~~v~D~~~E~~ri~~E~~~~~~~~~~~~~~~~~~~---~ 445 (453) T protein:vir:39 373 DIEYTF--TRNEPKDIKEQAETANIL--MGITSQETALSVISVIPDVQAEMEKIKKEEASTAIFDKDKQPSEKGTD---T 445 (453) T ss_pred cceEEe--CCCCCcCHHHHHHHHHHH--hccCChHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCCCCC---C Confidence 334444 455678888889988887 688999889998876443211100001100000000001111111111 1 Q ss_pred CCCCCC Q lcl|Aclame:pro 424 EGNEGN 429 (429) Q Consensus 424 ~~~~~n 429 (429) ..++++ T Consensus 446 ~~~~~~ 451 (453) T protein:vir:39 446 VVPETN 451 (453) T ss_pred CCCCcC Confidence 111111 No 176 >protein:vir:95806 Length: 440 # NCBI annotation: portal protein # Family: family:all:125 # MgeID: mge:1578 # MgeName: SMP # Cross-refs: genbank:acc:YP_950583;genbank:gi:119953778;genbank:GeneID:5076876 Probab=98.69 E-value=5.2e-08 Score=60.50 Aligned_cols=391 Identities=10% Similarity=0.001 Sum_probs=182.0 Q ss_pred hhhhhhcccccccccccccCCchHHHHHhh-cCCCC----cceec---hhhhhccHHHHHHHHHHHHhhccCceEEEecC Q lcl|Aclame:pro 3 SVKKFFNFEKRQTSQVIELNKDDEKLLEWL-GISPS----TISVK---GKNALKVATVFACIKILSESVSKLPLKIYQED 74 (429) Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~----~~~~~---~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~ 74 (429) ++..+..-.+.. ...+.+.. |.... ..... ...=+.+......|+..+..+-+-|+.+...+ T Consensus 1 ~~~~~~~~~~~r----------~~~l~~yy~g~~~~~~~~~~~~~~~~~~~ki~~n~~~~ivd~~~~~l~g~~~~~~~~~ 70 (440) T protein:vir:95 1 MLAAFLGSQKQR----------LAILASYAQGDNFSILSGHRRLDDEKADYRVRHKWGGYISSFATGYVIGNPVSIGVME 70 (440) T ss_pred ChhhHHHHHHHH----------HHHHHHHhccCCcccccccccccccCCcceeecchHHHHHHhhhhheeccCceEeeCC Confidence 444433211100 00000111 00000 00000 00012345556677777777777676664332 Q ss_pred CceeeeeecchhhhhhcccCcCCCCHHHHHHHHHHHHHhhCCeEEEEeeCCCCceEEEEeeCCcceEEEEcCCcceeeee Q lcl|Aclame:pro 75 EYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVYIDDVGLLNSKT 154 (429) Q Consensus 75 ~~~~~~~~~~~~~~~l~~~PN~~~s~~~~~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~l~p~~v~~~~~~~~~~~~~~ 154 (429) .+. ......+...+. ..........+..+.+.+|.+|+++..+..|.+ .+..++|..+.++.+......... T Consensus 71 ~~~--~~~~~~l~~~~~-----~n~~~~~~~~~~~~~~~~G~a~~~~~~d~~~~~-~i~~~~p~~~~~~~d~~~~~~~~~ 142 (440) T protein:vir:95 71 GGS--ADQLSTIKDIEW-----QNDINALNSDLAFDASVYGRAYEYHFRDKDKVD-RVVLISPLEMFVIRDLTVEQNIIA 142 (440) T ss_pred Ccc--HHHHHHHHHHHH-----hcCHhHHHHHHHHHHhhcCeEEEEEEecCCCce-EEEEEcccceEEEEcCCCCCceEE Confidence 211 111112222222 224455666778889999999999999888876 477789999988877543211111 Q ss_pred eEEEeecccC-ceEEEccceEEEeecC--------------CCC---------CcccccCHHHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 155 KMWYVVNTGG-QQRVLKPEEILHFKNG--------------ITL---------DGLVGVPTMEYLKSTLENSASADKFIN 210 (429) Q Consensus 155 ~~~~~~~~~g-~~~~~~~~evih~~~~--------------~~~---------~~~~G~s~~~~~~~~i~~~~~~~~~~~ 210 (429) ...+....+. ....++++.+++++.. ++. +...|.|-++.+...++....+..... T Consensus 143 ~i~~~~~~~~~~~~vyt~~~~~~~~~~~~~~~~~~~~~~~~~~~g~vPvv~~~n~~~g~sd~e~v~~lida~~~~~s~~~ 222 (440) T protein:vir:95 143 AVHLPIYADKVNMTVYTKDKVITYKPYSNNSVRLVVDDVKKHSYNDVPVVEWWNNRFRMGDYESEISLIDAYDAGQSDTA 222 (440) T ss_pred EEEEEEecCceEEEEEeCCeEEEEEEecCCccceeecceeeccCceeeEEEeeCCCCCCCchhhhHHHHHHHHHHHHHHH Confidence 1111111111 1112333333332100 000 123578888888888887777777777 Q ss_pred HHHHccCCcceEEEeC---CCCCHHHHHHHHHHHHHHhcccccccceeecC--CCceeEecCCChhHHHHHHHHHHHHHH Q lcl|Aclame:pro 211 NFYKQGLQVKGLVQYV---GDLNEDAKKVFRENFESMSSGLQNSHRIALMP--VGYQFQPISLNMSDAQFLENTELTIRQ 285 (429) Q Consensus 211 ~~~~ng~~~~~~~~~~---~~~~~e~~~~~~~~~~~~~~g~~~~~~~~vl~--~g~~~~~~~~~~~d~~~~e~~~~~~~~ 285 (429) +..+..+.|..+++.. ...++++...++..-.-.... .......+ ++++|..... ....+....+...+. T Consensus 223 ~~~~~~~~~~~v~~g~~~~~~~~~e~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~lt~~~--~~~~~~~~~~~l~~~ 297 (440) T protein:vir:95 223 NYMSDLNDAMLLVKGDLDGIKLSPEDAAKMKDANMLFLKT---GISTTGQQTTADASYIYKQY--DVNGTEAYKNRLAND 297 (440) T ss_pred HHHHHhhcceeeeecccccCCCCccchhhhhhccceeccc---ccccccCCCCcceeEEeecC--CHHHHHHHHHHHHHH Confidence 7777777777676542 223455554443321111110 00111122 2345544443 334456778888899 Q ss_pred HHHHhcCChhhcCCc-cccccccH----------HHHHHHHHHHHHhHHHHHHHHHHHHhhccchhhcchhhhhhhhhhH Q lcl|Aclame:pro 286 IATAFGIKMHQLNDL-SKATLNNI----------EQQQQQFYTDTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAI 354 (429) Q Consensus 286 Ia~~fgvp~~~l~~~-~~~~~~n~----------~~~~~~~~~~~l~P~~~~i~~~l~~~ll~~~~~~~~~~~~fd~~~l 354 (429) |+..-++|..-.+.. +..++... .+.....+...+..+++.|...+...--.. ... ..+++.+..- T Consensus 298 i~~~s~~p~~~~~~~~~n~Sg~Al~~~~~~l~~k~~~k~~~~~~~l~~~~~li~~~~~~~~~~~-~~~--~~v~i~f~~~ 374 (440) T protein:vir:95 298 IHRFSRIPNLDDDRFNSTSSGIALLYKMIGLEQVRKDKETYFTKALRRRYELISNIHKAINGPV-IEA--NKLTFTFHPN 374 (440) T ss_pred HHHHhCCcccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcc-ccc--ccceEEeCCC Confidence 999999987544322 11111111 112234445555555555555443221111 111 2233444555 Q ss_pred hhhhHHHHHHHHHHHHhCCCCCHHHHHHHhCCCCCCCcceee-eccccccccccccccCCCCCCCCCCCCCC Q lcl|Aclame:pro 355 LRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEAGGDRLL-VNGNMLPIDMAGQAYLKGGDTNGEVSKEG 425 (429) Q Consensus 355 ~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~Gl~~~~~gD~~~-~~~n~~~~~~~~~~~~~~g~~~~~~~~~~ 425 (429) ...+..+.++.+.++ +|+++..-+.++++.-..+ ++.. +-.-- ... ..+.....++.++.+.+++ T Consensus 375 ~p~~~~~~ad~~~kl--~g~iS~et~~~~l~~~d~~--~E~~ri~~E~-~~~-~~~~~~~~~~~~~~~~~~e 440 (440) T protein:vir:95 375 IPQDVWTEIKAYIEA--GGEISQETLMENASFTDYK--TEHSRILKQG-GSS-DLEIGQIVGDADVGQADTE 440 (440) T ss_pred CCCCHHHHHHHHHHH--hccCcHHHHHHhCCCCCcH--HHHHHHHHHH-HHh-hhhHHhhccCCCCCCcCCC Confidence 778899999998887 6889887787887653211 1110 00000 000 0001111111111111111 No 177 >protein:vir:106639 Length: 481 # NCBI annotation: ORF003 # Family: family:all:125 # MgeID: mge:1557 # MgeName: 187 # Cross-refs: genbank:acc:YP_239490;genbank:gi:66395218;genbank:GeneID:4555793 Probab=98.68 E-value=1.1e-07 Score=58.68 Aligned_cols=406 Identities=11% Similarity=0.048 Sum_probs=184.1 Q ss_pred Cchhhhhhcccccccc--cccccCCchHHHH------------------Hhh-cCCCCcce----e-c----hhhhhccH Q lcl|Aclame:pro 1 MDSVKKFFNFEKRQTS--QVIELNKDDEKLL------------------EWL-GISPSTIS----V-K----GKNALKVA 50 (429) Q Consensus 1 Mg~~~~~~~~~~~~~~--~~~~~~~~~~~~~------------------~~~-~~~~~~~~----~-~----~~~a~~~~ 50 (429) |+.++-+|+......- +..........+- ++. |....... . . ...-+.++ T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~yY~g~~~~i~~~~~~~~~~~~~~~~ki~~n 85 (481) T protein:vir:10 6 INNINTKFSPLANDDFVVSDLAELLKEENLRNFISRHQTEQVPRLEMLESYYLNRNTDILAGERRLQKYGDKADHRAVHN 85 (481) T ss_pred eehhchhcccccCceeeeecchhhcCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcccccCccccccccccccceeecc Confidence 8888877765443321 0111111111111 111 11111000 0 0 00012345 Q ss_pred HHHHHHHHHHHhhccCceEEEecCCceeeeeecchhhhhhcccCcCCCCHHHHHHHHHHHHHhhCCeEEEEeeCCCCceE Q lcl|Aclame:pro 51 TVFACIKILSESVSKLPLKIYQEDEYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQ 130 (429) Q Consensus 51 ~v~~~i~~ia~~ia~~~~~~~~~~~~~~~~~~~~~~~~~l~~~PN~~~s~~~~~~~~~~~~l~~G~~~~~~~~~~~g~~~ 130 (429) ....+|+..+..+.+-|+.+...+++ ..+.+..++.. .....+...+..+.+.+|.+|+.+..+.+|.+ T Consensus 86 ~~~~ivd~~~~~l~g~~~~~~~~d~~-----~~~~l~~~~~~-----n~~~~~~~~~~~~~~~~G~~~~~~~~d~dg~~- 154 (481) T protein:vir:10 86 YAKYVSRFIVGYLTGNPITITHQDNQ-----TNDKIIELNDL-----NDADEVNSDLALNLSIYGRAYEIVYRDFEDRD- 154 (481) T ss_pred hHHHHHHHHHhhhccCCceEecCChh-----HHHHHHHHHHh-----cChhHHHHHHHHHHHhcCeEEEEEEeCCCCeE- Confidence 56777888888777777765433221 11234444432 24557888899999999999999999888876 Q ss_pred EEEeeCCcceEEEEcCCcceee-eeeEEEe-ecccCce----EEEccceEEEeecC-----------CCC---------C Q lcl|Aclame:pro 131 ALWPIDASKVTVYIDDVGLLNS-KTKMWYV-VNTGGQQ----RVLKPEEILHFKNG-----------ITL---------D 184 (429) Q Consensus 131 ~l~~l~p~~v~~~~~~~~~~~~-~~~~~~~-~~~~g~~----~~~~~~evih~~~~-----------~~~---------~ 184 (429) .+..++|..+.++.+....... ....+|. ...++.. ..+.+..+.++... ++. + T Consensus 155 ~i~~~~p~~~~~v~d~~~~~~~~~~i~~~~~~~~~~~~~~~~~~y~~~~i~~~~~~~~~~~~~~~~~~~~g~vPvv~~~n 234 (481) T protein:vir:10 155 TFKVLDPKSTFVVYDQTLDKKVVAGVRYFEKQDKDKVPVQHVEVYTTDKIYYIEIKGGTYHRVEEVEHYYNDVPIIEYLN 234 (481) T ss_pred EEEEEcccceEEEEcCCCCCceEEEEEEEEEeeCCCceEEEEEEEecCeEEEEEecCCceeecccccccCCceeEEEeec Confidence 5778899999888765432111 1111111 1111111 12233333333211 000 1 Q ss_pred cccccCHHHHHHHHHHHHHHHHHHHHHHHHccCCcceEEEeCCCCCHHHHHHHHHHHHHHhcccccccceeecCCCceeE Q lcl|Aclame:pro 185 GLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGDLNEDAKKVFRENFESMSSGLQNSHRIALMPVGYQFQ 264 (429) Q Consensus 185 ~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~g~~~~~~~~vl~~g~~~~ 264 (429) ...|.|-++.+...++............++..+.|..++......+++..+.++..-.- ..... ......+++.++. T Consensus 235 ~~~g~~~~~~v~~lida~~~~~s~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~--~~~~~-~~~~~~~~~~~~~ 311 (481) T protein:vir:10 235 DQFKQGDFENVIALIDLYDSAQSDTANYMTDLNDAMLAIIGNVDLDSEDAKAFRDANMI--HLEPG-TNANGSEGKAEVK 311 (481) T ss_pred CCCCCCchhhHHHHHHHHHHHHHHHHHHHHHhcCceeEeecCcCCCccchhhhhhccce--ecccc-ccccCCCCCccee Confidence 23577877777777765555555555555656667666654333444443333321100 00000 0011112233333 Q ss_pred ecCCChhHHHHHHHHHHHHHHHHHHhcCChhhcCCcc-ccccccHHHH----------HHHHHHHHHhHHHHHHHHHHHH Q lcl|Aclame:pro 265 PISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLS-KATLNNIEQQ----------QQQFYTDTLQATLTMYEQEMTY 333 (429) Q Consensus 265 ~~~~~~~d~~~~e~~~~~~~~Ia~~fgvp~~~l~~~~-~~~~~n~~~~----------~~~~~~~~l~P~~~~i~~~l~~ 333 (429) .+........+.+..+...+.|+..-++|....+... ..++...+.. ....+...+.-+++.+...++. T Consensus 312 ~l~~~~~~~~~~~~~~~l~~~i~~~s~~p~~~~~~~~~n~Sg~Al~~~~~~l~~k~~~~~~~~~~~l~~~~~li~~~~~~ 391 (481) T protein:vir:10 312 YVYKQYDVAGVEAYKKRLQNDIHKYTNTPDLNDEQFSGVQSGESMKYKLFGLEQVRAIKERLFKKGLMKRYKLLLNNVNL 391 (481) T ss_pred EEeecCCHHHHHHHHHHHHHHHHHHhCCccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc Confidence 3333333444667788888899999999876554322 1111111111 1122222233333333322221 Q ss_pred hhccchhhcchhhhhhhhhhHhhhhHHHHHHHHHHHHhCCCCCHHHHHHHhCCCCCC--Ccceeeecccccccccccccc Q lcl|Aclame:pro 334 KLFLDSELDKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEA--GGDRLLVNGNMLPIDMAGQAY 411 (429) Q Consensus 334 ~ll~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~Gl~~~~--~gD~~~~~~n~~~~~~~~~~~ 411 (429) .-... . ....+.+.+..-...+..+.++.+.++ .|+++...+.+++++-..+ ..+.+. .... ....... T Consensus 392 ~~~~~-~--~~~~i~v~f~~~~~~~~~~~a~~~~kl--~g~is~et~~~~l~~i~d~~~E~~ri~--~E~~--~~~~~~~ 462 (481) T protein:vir:10 392 TGLKQ-H--NYAELTITFTPNLPKSMMESINAFNAL--SGGVSESTRLSLLDFIDNPKEELEKMQ--EEEA--QREKQAD 462 (481) T ss_pred cCCCc-c--ccceeeEEeCCCCCcCHHHHHHHHHHH--hccCChHHHHHhCCCCCCHHHHHHHHH--HHHH--HHHhhhh Confidence 11100 0 111233333555678888999988887 4888888888888763321 111110 0000 0000000 Q ss_pred CCCCCCCCCCCCCCCCCC Q lcl|Aclame:pro 412 LKGGDTNGEVSKEGNEGN 429 (429) Q Consensus 412 ~~~g~~~~~~~~~~~~~n 429 (429) ..+-....+...+.+||+ T Consensus 463 ~~~~~~~~~~~~~~dd~~ 480 (481) T protein:vir:10 463 KRGYGEAFENHLNVDDSN 480 (481) T ss_pred hccCCccCCCCCCCCCCC Confidence 011001111122223333 No 178 >protein:vir:78907 Length: 518 # NCBI annotation: gp3 # Family: family:all:4147 # MgeID: mge:1859 # MgeName: A006 # Cross-refs: genbank:acc:YP_001468843;genbank:gi:157325445;genbank:GeneID:5601904 Probab=98.68 E-value=8.5e-08 Score=59.35 Aligned_cols=403 Identities=11% Similarity=0.012 Sum_probs=182.3 Q ss_pred Cchhhhhhcccccccccccc--------c-----CCchHHH-----HHhhcCCCCcceechhhhhccHHHHHHHHHHHHh Q lcl|Aclame:pro 1 MDSVKKFFNFEKRQTSQVIE--------L-----NKDDEKL-----LEWLGISPSTISVKGKNALKVATVFACIKILSES 62 (429) Q Consensus 1 Mg~~~~~~~~~~~~~~~~~~--------~-----~~~~~~~-----~~~~~~~~~~~~~~~~~a~~~~~v~~~i~~ia~~ 62 (429) |||++++..+.+..-....+ . ......+ ...+........+. ..-+..+.-..+++.+|+- T Consensus 1 ~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~-~~~~~~~l~~~i~~~~A~l 79 (518) T protein:vir:78 1 MGVWSVMTRFIKGWLNGKPNGSEPELIPKYLPLVPDNQKEWSKDSYLTSLWAQGYVPTVH-DKLMNSGTGNEIVVVAAEY 79 (518) T ss_pred CcchhhHHHHHHHhhcCCCCccchhccHHHhhhcccchhhhhhhhhhhhhcccCCCCccc-cccccCChHHHHHHHHHHh Confidence 99999887654432111100 0 0010000 01111111010011 1112333455677888887 Q ss_pred hccCceEEEecCCceee-eeecchhhhhhcccCcCCCCHHHHHHHHHHHHHhhCCeEEEEeeCCCCceEEEEeeCCcceE Q lcl|Aclame:pro 63 VSKLPLKIYQEDEYGIQ-RGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVT 141 (429) Q Consensus 63 ia~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~PN~~~s~~~~~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~l~p~~v~ 141 (429) +..=+..+.-.+.+... ......+..+|. .-.....+...+.+.+..|.+++.+..+ .|++ .+..++++.+- T Consensus 80 l~~e~~~i~v~~~~~~d~e~~~~~l~~il~-----~n~f~~~~~~~~e~a~a~G~~~~k~~~d-~~~~-~i~~v~ad~~~ 152 (518) T protein:vir:78 80 ISGKPLSIDVTGVNGSKDENLTKQLKEALR-----IDNFDSKSVKIVELAGGSGVSAVKINIL-NGRP-SISVHSSSQFW 152 (518) T ss_pred hcCCCceEEecCccccCcHHHHHHHHHHHH-----hccHHHHHHHHHHHhhccCceEEEEEEE-CCee-EEEEEcCCeeE Confidence 76554444322211111 111111222232 1233445556677778888888877664 3543 56667777766 Q ss_pred EEEcCCcce---------------eee--------------------eeEEEeeccc-CceEE---------E----c-- Q lcl|Aclame:pro 142 VYIDDVGLL---------------NSK--------------------TKMWYVVNTG-GQQRV---------L----K-- 170 (429) Q Consensus 142 ~~~~~~~~~---------------~~~--------------------~~~~~~~~~~-g~~~~---------~----~-- 170 (429) +........ .+. ...+..+..+ +.... + . T Consensus 153 P~~~~g~~~~~~f~~~~~~~~k~~~y~~lE~he~~~~~~~~~~~~~~~I~n~ly~~~~~~~v~~~~~~~~~~l~~~~~~~ 232 (518) T protein:vir:78 153 IDFKNNEPFRFNFFEEIPTSNKADIYYLVESREIKQWDKEGKKLSGGFVTYSVIKIDGDKTTPISAERLPEQITSYLHTN 232 (518) T ss_pred EEeecCcEEEEEEEEEeecCCcceeEEEEEeeccccccceeecccceeEEEEEeeecCcccccccccccccccccccccc Confidence 543321100 000 0000011100 10000 0 0 Q ss_pred -------------cceEEEeecCCCC----CcccccCHHHHHHHHHHHHHHHHHHHHHHHHccCCcceEEEe-----CCC Q lcl|Aclame:pro 171 -------------PEEILHFKNGITL----DGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQY-----VGD 228 (429) Q Consensus 171 -------------~~evih~~~~~~~----~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~-----~~~ 228 (429) .--+.|+++..+. +.+.|+|.+.-+...++..+........-|+. +.+..++.. ... T Consensus 233 ~~~e~~~~~tg~~~~~~~~~~n~~~N~~~~~splG~S~~~~~~~~id~lD~~~s~~~~e~~~-g~~~i~v~~~~l~~~~~ 311 (518) T protein:vir:78 233 DIQLNHSVSIGLKSMGAYLINNSPSNTRYPHLNLGESDLSQCTNYLFAVDYFFTVYMREGEK-TKTKIAASERMFRKKVN 311 (518) T ss_pred cCccceeeccCCccceEEeeccccccccccCCCcCcchHhhhhHHHHHHHHHHHHHHHHHHh-CCceeeechhHhccCCC Confidence 1112333432121 24569999999999999888888777777776 455444421 111 Q ss_pred -CCHHHHHHHHHHHHHHhcccccccceeecCCCc----eeEecCCChhHHHHHHHHHHHHHHHHHHhcCChhhcCCcccc Q lcl|Aclame:pro 229 -LNEDAKKVFRENFESMSSGLQNSHRIALMPVGY----QFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKA 303 (429) Q Consensus 229 -~~~e~~~~~~~~~~~~~~g~~~~~~~~vl~~g~----~~~~~~~~~~d~~~~e~~~~~~~~Ia~~fgvp~~~l~~~~~~ 303 (429) ......-.+.. =.+.|.... .-.+.|. .++.++....+.++.+..+...+.+....|+++..++..+.. T Consensus 312 ~~~~~~~~~fd~-~~~~y~~i~-----~~~~~~~~~~~~i~~~~~~Ir~e~~~~~~~~~l~~~~~~~G~s~~tfg~~~~~ 385 (518) T protein:vir:78 312 KSTDKEEWSMNV-DEDYFMQFK-----GTLDAGAKLNDMIQFMQGDFRDGSYRETMEYFAQKAVSKSGYNPATFNLGNRE 385 (518) T ss_pred CCCCccccccCC-CCceEEEec-----CcCCCCCccccceeeeecccChHHHHHHHHHHHHHHHHhhCCChhhcCccccc Confidence 11000000000 000011000 0011222 366677777788899999999999999999999998753222 Q ss_pred cccc-HH----------HHHHHHHHHHHhHHHHHHHHHHHHhhcc--chhhcchhhhhhhhhhHhhhhHHHHHHHHHHHH Q lcl|Aclame:pro 304 TLNN-IE----------QQQQQFYTDTLQATLTMYEQEMTYKLFL--DSELDKGFYSKFNVDAILRADIKTRYEAYRTGI 370 (429) Q Consensus 304 ~~~n-~~----------~~~~~~~~~~l~P~~~~i~~~l~~~ll~--~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~ 370 (429) ..++ +. ......++.+|.-++..+...+...... .......+.+.+++++-+..|..+.++...+++ T Consensus 386 ~TATei~s~~~~~~~t~~~~~~~~e~al~~l~~~i~~l~~~~~~~~~~~~~~~~~~v~i~f~D~i~~D~~~~~~~~~~~v 465 (518) T protein:vir:78 386 VKATEIWSLQDATVRKIEKKKRLIQNVYEQMLWDFLYLLTGGTNNKEKAIMRDEIRVIIEFPDPMSVNLNELSSTLNNMN 465 (518) T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCccccccCCCceeEEEEeCCCCCCCHHHHHHHHHHHH Confidence 1111 00 1113334444444444444333211000 001112234666667778899999999999999 Q ss_pred hCCCCCHHHHHHHh--CCCCCCCcc-eee-ec-cccccccccccccCCCCCCCCCCCCCC Q lcl|Aclame:pro 371 QGGFLKPNEARSKE--DLPPEAGGD-RLL-VN-GNMLPIDMAGQAYLKGGDTNGEVSKEG 425 (429) Q Consensus 371 ~~g~~t~NE~R~~~--Gl~~~~~gD-~~~-~~-~n~~~~~~~~~~~~~~g~~~~~~~~~~ 425 (429) .+|+|++.++-+++ |+.. ++.+ ++. +. -+. ....+++ .+..+.+++.| T Consensus 466 ~aGimS~e~~i~~~~~~~~d-eea~~e~~ri~~E~~--~~~~~~p----~~~~g~~~~~g 518 (518) T protein:vir:78 466 SALAMSVEEKVKLIHPKWED-EEIQAEVKRIYLENA--IGEVPDP----EAIGGMETKGG 518 (518) T ss_pred hcCCCCHHHHHHHhCCCCCH-HHHHHHHHHHHHHhc--ccCCCCC----ccccCCCCCCC Confidence 99999999965554 3322 1111 110 00 000 0000111 11111111111 No 179 >protein:vir:94742 Length: 409 # NCBI annotation: putative portal protein # Family: family:all:524 # MgeID: mge:1529 # MgeName: phi LC3 # Cross-refs: genbank:acc:NP_996701;genbank:gi:45597416;genbank:GeneID:2767966 Probab=98.65 E-value=1.4e-07 Score=58.09 Aligned_cols=350 Identities=10% Similarity=0.046 Sum_probs=159.4 Q ss_pred CchhhhhhcccccccccccccCCchHHHHHhhcCCCCc--ce--echh--hhhc--cHHHHHHHHHHHHhhccCceEEEe Q lcl|Aclame:pro 1 MDSVKKFFNFEKRQTSQVIELNKDDEKLLEWLGISPST--IS--VKGK--NALK--VATVFACIKILSESVSKLPLKIYQ 72 (429) Q Consensus 1 Mg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~--~~~~--~a~~--~~~v~~~i~~ia~~ia~~~~~~~~ 72 (429) ..+++++.....+.... ...+.++....... .. +..+ .-++ .....-+|+.++..+. |.=++ T Consensus 3 ~~~i~~L~~~~~~~~~r-------~~~~~~yY~g~~~~~~~~~~~p~~~~~~~~~v~nw~~~iVds~a~rl~---~~Gf~ 72 (409) T protein:vir:94 3 EKGIGYLRFKLSVHKRR-------AEMRYDQYAMKYVDRFKGITIPQALSQQYRSILGWCAKGVDSLADRLV---FREFE 72 (409) T ss_pred HHHHHHHHHHHHHHhHH-------HHHHHHHhcccCchhhcChhhhHHHHHHHhhhcchhHHHHHHhHhhcc---cCccc Confidence 22233333211111100 00011111111100 00 1100 0011 1233345555554322 22121 Q ss_pred cCCceeeeeecchhhhhhcccCcCCCCHHHHHHHHHHHHHhhCCeEEEEeeCCCCceEEEEeeCCcceEEEEcCCcceee Q lcl|Aclame:pro 73 EDEYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVYIDDVGLLNS 152 (429) Q Consensus 73 ~~~~~~~~~~~~~~~~~l~~~PN~~~s~~~~~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~l~p~~v~~~~~~~~~~~~ 152 (429) .++ ..+...+. -|. .......+..+.+.+|.+|+.+..+.+|.+ .+.+++|..+.+.++....... T Consensus 73 ~~d--------~~l~~i~~--~N~---ld~~~~~~~~~aliyG~sf~~v~~~~dg~~-~i~~~sp~~~~~i~D~~~~~~~ 138 (409) T protein:vir:94 73 NDD--------FTVNEIFE--ENN---PDIFFDSAVLSSLIASCSFTYISKGENDAV-RLQVIEAVNATGIIDPITGLLT 138 (409) T ss_pred CCc--------hHHHHHHH--hcC---hhHHHHHHHHHHHHhcceeEEEecCCCCce-EEEEeccceEEEEEecCCCcee Confidence 111 12334332 222 244555788889999999999999888875 7888999988887765321111 Q ss_pred eeeEEEeecccCce---EEEcc----------------------ceEEEeecCCCCCcccccCHH-HHHHHHHHHHHHHH Q lcl|Aclame:pro 153 KTKMWYVVNTGGQQ---RVLKP----------------------EEILHFKNGITLDGLVGVPTM-EYLKSTLENSASAD 206 (429) Q Consensus 153 ~~~~~~~~~~~g~~---~~~~~----------------------~evih~~~~~~~~~~~G~s~~-~~~~~~i~~~~~~~ 206 (429) ....+......+.. ..+.+ --|++|.+.......+|.|-+ +.+...++...... T Consensus 139 ~a~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~g~vPvV~f~n~~~~~~~~G~s~I~e~v~~l~da~~r~~ 218 (409) T protein:vir:94 139 EGYAVLERDENNNVVLEAHFLPDRTDYYYRDSRNNISIANPTGHPLLVPIIHRPDAVRPFGRSRITRSGMYWQSNAKRTL 218 (409) T ss_pred eeEEEEEecCCCceEEEEEEecCcEEEEEecCceeEeeeCCCCCcceEEeccccccccccCccccchhHHHHHHHHHHHH Confidence 11111111111110 01111 126666654445567888855 33433344443333 Q ss_pred HHHHHHHHccCCcceEEE-eCCCCCHHHHHHHHHHHHHHhcccccccceeecC-----CCceeEecCCChhHHHHHHHHH Q lcl|Aclame:pro 207 KFINNFYKQGLQVKGLVQ-YVGDLNEDAKKVFRENFESMSSGLQNSHRIALMP-----VGYQFQPISLNMSDAQFLENTE 280 (429) Q Consensus 207 ~~~~~~~~ng~~~~~~~~-~~~~~~~e~~~~~~~~~~~~~~g~~~~~~~~vl~-----~g~~~~~~~~~~~d~~~~e~~~ 280 (429) -......+-.+.|.-++. .+.+.. ..+.++.... +++.++ .+.++.++....-+ .+++.++ T Consensus 219 ~~~~~~~e~~a~pqr~i~G~d~d~~--~~~~~~~~~~----------~i~~~~~d~dg~~~~v~q~~~~~l~-~~~~~l~ 285 (409) T protein:vir:94 219 ERADVTAEFYSFPQKYVTGLSDDAE--PMETWKATVS----------SMLQFTKDEDGDKPTLGQFTQPSMS-PFTEQLR 285 (409) T ss_pred HHHHHHHHHhcChhheeEecCCCCc--ccchhhhhHH----------HhhcCCCCCCCCCceEEecCCCChh-HHHHHHH Confidence 333333333445544443 333222 2222222222 233332 34666665443322 3789999 Q ss_pred HHHHHHHHHhcCChhhcCCcccc--ccccHHHHHHHHH----------HHHHhHHHHHHHHHHHHhhccchhhcchhhhh Q lcl|Aclame:pro 281 LTIRQIATAFGIKMHQLNDLSKA--TLNNIEQQQQQFY----------TDTLQATLTMYEQEMTYKLFLDSELDKGFYSK 348 (429) Q Consensus 281 ~~~~~Ia~~fgvp~~~l~~~~~~--~~~n~~~~~~~~~----------~~~l~P~~~~i~~~l~~~ll~~~~~~~~~~~~ 348 (429) ..+.++|..-++|+..+|+...+ +...+..+...+. ...+.-+++......+. .-..+.......+. T Consensus 286 ~~~~~~a~~t~lP~~~lg~~~~NpsSa~Al~a~~~~L~~~a~~k~~~fg~~~~~~~rla~~i~~~-~~~~~~~~~~~~v~ 364 (409) T protein:vir:94 286 TAAAGFAGETGLTLDDLGFVSDNPSSVEAIKASHENLRLAGRKAQRSLGAGLLNVAYLAACLRDD-APYLREQFRKTKPK 364 (409) T ss_pred HHHHHHhhhcCCCHHHhccccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-CCccccccccceEE Confidence 99999999999999999875432 1111222221111 11122222211111110 00000111122333 Q ss_pred hhhhhHhh---hhHHHHHHHHHHHHhCC--CCCHHHHHHHhCCCCCC Q lcl|Aclame:pro 349 FNVDAILR---ADIKTRYEAYRTGIQGG--FLKPNEARSKEDLPPEA 390 (429) Q Consensus 349 fd~~~l~~---~d~~~~~~~~~~~~~~g--~~t~NE~R~~~Gl~~~~ 390 (429) | ..+.. .+....++++.|++++| +...+-+++++|+..-+ T Consensus 365 W--~p~~~~~~~~~a~~aDa~~Kl~~ag~~~~~~~~~~~~lG~~~~d 409 (409) T protein:vir:94 365 W--EPLFEADASMLSLIGDGAIKLNQAIPEFINKDTIRDLTGIEGGE 409 (409) T ss_pred e--ccCCCcchHHHHHHHHHHHHHHHhcccccchhHHHHHcCCCCCC Confidence 4 22222 23466778899999998 56678899999998765 No 180 >protein:vir:4223 Length: 486 # NCBI annotation: predicted 53.7Kd protein # Family: family:all:524 # MgeID: mge:89 # MgeName: L5 # Cross-refs: genbank:acc:NP_039678;swissprot:sw:q05220;genbank:gi:9625444;uniprot:Q05220;genbank:GeneID:2942930;interpro:IPR010859 Probab=98.64 E-value=1.6e-07 Score=57.88 Aligned_cols=396 Identities=11% Similarity=0.044 Sum_probs=170.2 Q ss_pred Cc---------hhhhhhcccccccccccccCCchHHHHHhhcCCCCc--ceec-hhhh----hccHHHHHHHHHHHHhhc Q lcl|Aclame:pro 1 MD---------SVKKFFNFEKRQTSQVIELNKDDEKLLEWLGISPST--ISVK-GKNA----LKVATVFACIKILSESVS 64 (429) Q Consensus 1 Mg---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-~~~a----~~~~~v~~~i~~ia~~ia 64 (429) +| ++..+.......... ...+-++.-+.... .... +..+ .......-+|+.++..+- T Consensus 6 ~~~~e~~~~~~~~~~l~~~~~~~~~r-------~~~l~~YY~G~~~i~~~~~~~~~~~~~~~~v~n~~~~iVd~~~~~l~ 78 (486) T protein:vir:42 6 PGMEEIEDPAVVREEMISAFEDASKD-------LASNTSYYDAERRPEAIGVTVPREMQQLLAHVGYPRLYVDSVAERQA 78 (486) T ss_pred CCCCCcccHHHHHHHHHHHHHHHHHH-------HHHHHHHhcccCcchhcccccchhHhhhhhccchHHHHHHHHHhhhc Confidence 11 122222111100000 00000111000000 0000 0000 012344556666666554 Q ss_pred cCceEEEecCCceeeeeecchhhhhhcccCcCCCCHHHHHHHHHHHHHhhCCeEEEEeeCCCCc-------eEEEEeeCC Q lcl|Aclame:pro 65 KLPLKIYQEDEYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGK-------VQALWPIDA 137 (429) Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~PN~~~s~~~~~~~~~~~~l~~G~~~~~~~~~~~g~-------~~~l~~l~p 137 (429) -..|.+ .++. .....+..++. -|. .......+..+++.+|.+|+.+.++..+. ...+.+++| T Consensus 79 ~~g~~~---~~~~---~~~~~~~~i~~--~N~---~d~~~~~~~~~a~~~G~ay~~v~~~e~~~~~~~~~~~~~i~~~~p 147 (486) T protein:vir:42 79 VEGFRL---GDAD---EADEELWQWWQ--ANN---LDIEAPLGYTDAYVHGRSFITISKPDPQLDLGWDQNVPIIRVEPP 147 (486) T ss_pred ccceec---CCCc---hhHHHHHHHHH--hcC---hhHHHHHHHHHHhhcCceEEEEecCCcccccccCCCeeEEEEecc Confidence 344432 1111 00112333332 232 34556788999999999999998765432 235777889 Q ss_pred cceEEEEcCCcceeeeeeE---------------------EEeecccCceEE-------EccceEEEeecCCCCCccccc Q lcl|Aclame:pro 138 SKVTVYIDDVGLLNSKTKM---------------------WYVVNTGGQQRV-------LKPEEILHFKNGITLDGLVGV 189 (429) Q Consensus 138 ~~v~~~~~~~~~~~~~~~~---------------------~~~~~~~g~~~~-------~~~~evih~~~~~~~~~~~G~ 189 (429) ..+.++++........... +++...+|.... +..-.|++|++.......+|. T Consensus 148 ~~~~~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~h~~g~vPvv~~~n~~~~~~~~G~ 227 (486) T protein:vir:42 148 TRMHAEIDPRINRVSKAIRVAYDKEGNEIQAATLYTPMETIGWFRADGEWAEWFNVPHGLGVVPVVPLPNRTRLSDLYGT 227 (486) T ss_pred cceEEEEeCCCCCeEEEEEEEEecCCCeEEEEEEEcCCcEEEEEecCCcEEeecceecCCCCceEEEeccccccCCCCCc Confidence 9888877643211111111 111111111111 111235666654444556788 Q ss_pred CHHHH-HHHHHHHHHHHHHHHHHHHHccCCcceEEEeCCCCCHHHHH----HHHHHHHHHhcccccccceeecC-CCcee Q lcl|Aclame:pro 190 PTMEY-LKSTLENSASADKFINNFYKQGLQVKGLVQYVGDLNEDAKK----VFRENFESMSSGLQNSHRIALMP-VGYQF 263 (429) Q Consensus 190 s~~~~-~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~~e~~~----~~~~~~~~~~~g~~~~~~~~vl~-~g~~~ 263 (429) |-++. +...++.............+-.+.|..++.- .++++.. .-...|.. ..+.+++++ ++.+| T Consensus 228 s~i~~~v~~liDa~~~~~s~~~~~~e~~a~p~~~i~G---~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~ 298 (486) T protein:vir:42 228 SEITPELRSMTDAAARILMLMQATAELMGVPQRLIFG---IKPEEIGVDSETGQTLFDA------YLARILAFEDAEGKI 298 (486) T ss_pred ccchhhHHHHHHHHHHHHHHHHHHHHhhcchHHHhhc---CCccccccccccccchhhh------hhchhcccCCCCceE Confidence 86553 3333343333333333333444444444431 1111111 01111111 123455554 56777 Q ss_pred EecCCChhHHHHHHHHHHHHHHHHHHhcCChhhcCCcccc--ccccHHH----------HHHHHHHHHHhHHHHHHHHHH Q lcl|Aclame:pro 264 QPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKA--TLNNIEQ----------QQQQFYTDTLQATLTMYEQEM 331 (429) Q Consensus 264 ~~~~~~~~d~~~~e~~~~~~~~Ia~~fgvp~~~l~~~~~~--~~~n~~~----------~~~~~~~~~l~P~~~~i~~~l 331 (429) .++.....+ .+++..+..+.++|..=++|+..+++...+ ++..... .....+...+.-+++.+.... T Consensus 299 ~q~~~~~~e-~~~~~l~~~i~~~s~~~~~p~~~fg~~~~n~~Sg~Al~~~~~~l~~ka~~~~~~f~~~l~~~~~l~~~~~ 377 (486) T protein:vir:42 299 QQFSAAELA-NFTNALDQIAKQVAAYTGLPPQYLSTAADNPASAEAIRAAESRLIKKVERKNLMFGGAWEEAMRIAYRIM 377 (486) T ss_pred EeecccCHH-HHHHHHHHHHHHHhcccCCCHHHhccccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh Confidence 776554333 378888999999999999999998764322 1111111 112223333333333332211 Q ss_pred HHhhccchhhcchhhhhhhhhhHhhhhHHHHHHHHHHHHhC--CCCCHHHHHHHhCCCCCC--Ccceee-----eccc-- Q lcl|Aclame:pro 332 TYKLFLDSELDKGFYSKFNVDAILRADIKTRYEAYRTGIQG--GFLKPNEARSKEDLPPEA--GGDRLL-----VNGN-- 400 (429) Q Consensus 332 ~~~ll~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~--g~~t~NE~R~~~Gl~~~~--~gD~~~-----~~~n-- 400 (429) +.. -.+.. ..++.+.| ..-...+..+.++.+.+++++ |+++..-+++.+|+-+.+ ....+. .+.. T Consensus 378 ~~~-~~~~d-~~~i~v~w--~~~~~~s~~~~ad~~~kl~~~~~g~~s~et~~~~lg~~~d~~~e~~~~~~e~~~~~~~~~ 453 (486) T protein:vir:42 378 KGG-DVPPD-MLRMETVW--RDPSTPTYAAKADAATKLYGNGQGVIPRERARIDMGYSVKEREEMRRWDEEEAAMGLGLL 453 (486) T ss_pred cCC-Ccccc-ceeeeEEe--cCCCCCCHHHHHHHHHHHHhcccCCCCHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHH Confidence 110 00101 12223333 444567888899999999886 678877789999986543 111110 0000 Q ss_pred --ccccccccc-ccCCCCCCCCCCC--CCCCCC Q lcl|Aclame:pro 401 --MLPIDMAGQ-AYLKGGDTNGEVS--KEGNEG 428 (429) Q Consensus 401 --~~~~~~~~~-~~~~~g~~~~~~~--~~~~~~ 428 (429) +.......+ ....+++..++++ ..++++ T Consensus 454 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 486 (486) T protein:vir:42 454 GTMVDADPTVPGSPSPTAPPKPQPAIESSGGDA 486 (486) T ss_pred HHhhcCCCCCCCCCCCCCCCCCCcccCCCCCCC Confidence 001111111 1111122222222 344444 No 181 >protein:vir:97171 Length: 512 # NCBI annotation: ORF006 # Family: family:all:125 # MgeID: mge:1654 # MgeName: 85 # Cross-refs: genbank:acc:YP_239722;genbank:gi:66394876;genbank:GeneID:5130904 Probab=98.63 E-value=1.2e-07 Score=58.55 Aligned_cols=408 Identities=10% Similarity=0.042 Sum_probs=183.6 Q ss_pred CchhhhhhcccccccccccccCCchHHHHHhhcCCCCcc----ee-c---hhhhhccHHHHHHHHHHHHhhccCceEEEe Q lcl|Aclame:pro 1 MDSVKKFFNFEKRQTSQVIELNKDDEKLLEWLGISPSTI----SV-K---GKNALKVATVFACIKILSESVSKLPLKIYQ 72 (429) Q Consensus 1 Mg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~-~---~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~ 72 (429) +..+.++........... ...+.++.-...... .. . ...=+........++..+..+-+-|+.+.. T Consensus 42 ~~~i~~~i~~~~~~~~~r------~~~l~~YY~g~~~i~~~~~~~~~~~~~~~ki~~n~~k~Ivd~~~~yl~g~p~~~~~ 115 (512) T protein:vir:97 42 INEVSKYIEHHMDYQRPR------LKVLSDYYEGKTKNLVELTRRKEEYMADNRVAHDYASYISDFINGYFLGNPIQCQD 115 (512) T ss_pred HHHHHHHHHHHHHhhHHH------HHHHHHHhcccCccccccCcccccccCcceeecchHHHHHHHHhhhhcccCceecc Confidence 122222221100000000 001111110000000 00 0 000012345566777788877788877643 Q ss_pred cCCceeeeeecchhhhhhcccCcCCCCHHHHHHHHHHHHHhhCCeEEEEeeCCCCceEEEEeeCCcceEEEEcCCccee- Q lcl|Aclame:pro 73 EDEYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVYIDDVGLLN- 151 (429) Q Consensus 73 ~~~~~~~~~~~~~~~~~l~~~PN~~~s~~~~~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~l~p~~v~~~~~~~~~~~- 151 (429) .+++ ....+..++. ..........+..+++.+|.+|+++.++.+|.+ .+.+++|..+.++.+...... T Consensus 116 ~d~~-----~~~~l~~~~~-----~n~~~~~~~~~~~~~~i~G~ay~~vy~ded~~~-~i~~~~p~~~~~iyd~~~~~~~ 184 (512) T protein:vir:97 116 DDKD-----VLEAIEAFND-----LNDVESHNRSLGLDLSIYGKAYELMIRNQDDET-RLYKSDAMSTFVIYDNTIERNS 184 (512) T ss_pred CChH-----HHHHHHHHHh-----hcCHHHHHHHHHHHHHhcCeEEEEEEeCCCCce-EEEEEcccceEEEEcCCCCCce Confidence 3221 1112333332 234556667788899999999999999888865 578889999988877543211 Q ss_pred eeeeEEEee-cccCc-------eEEEccceEEEeecCC----------------CC---------CcccccCHHHHHHHH Q lcl|Aclame:pro 152 SKTKMWYVV-NTGGQ-------QRVLKPEEILHFKNGI----------------TL---------DGLVGVPTMEYLKST 198 (429) Q Consensus 152 ~~~~~~~~~-~~~g~-------~~~~~~~evih~~~~~----------------~~---------~~~~G~s~~~~~~~~ 198 (429) .....+|.. ...+. ...+++..+.+++... +. +...|.|-++.+... T Consensus 185 ~~~vr~~~~~~~~~~~~~~~~~~~vyt~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~vPvv~~~nn~~~~gd~e~v~~l 264 (512) T protein:vir:97 185 IAGVRYLRTKPIDKTDEDEVFTVDLFTSHGVYRYLTSRTNGLKLTPRENGFESHSFERMPITEFSNNERRKGDYEKVITL 264 (512) T ss_pred EEEEEEEEeeeccccccceEEEEEEEeCCcEEEEEecCCCcccccccccccccccCcccceEeecCCCCCCCchhhhHHH Confidence 111111111 11100 0123444444432110 00 123578888888888 Q ss_pred HHHHHHHHHHHHHHHHccCCcceEEEeCCCCCHHHHHHHHHHHHHHhcccccccc--eeecCCCceeEecCCChhHHHHH Q lcl|Aclame:pro 199 LENSASADKFINNFYKQGLQVKGLVQYVGDLNEDAKKVFRENFESMSSGLQNSHR--IALMPVGYQFQPISLNMSDAQFL 276 (429) Q Consensus 199 i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~g~~~~~~--~~vl~~g~~~~~~~~~~~d~~~~ 276 (429) ++....+.....+.++..+.|-.+++-....++++....+....-.......... ..-.++|.++..+........+. T Consensus 265 iDa~d~~~S~~~~~~~~~~~~~lv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~e 344 (512) T protein:vir:97 265 IDLYDNAESDTANYMSDLNDAMLLIKGNLNLDPVEVRKQKEANVLFLEPTVYENRDTGIETEGSVDGGYIYKQYDVQGTE 344 (512) T ss_pred HHHHHHHHHHHHHHHHHhcCceeeeecCccCCchhhhhhhhcccccccccchhhcccccCCCCCcceEEEeecCCHHHHH Confidence 8887777766666677777776666654444444433332211111111111111 11224555555554443444455 Q ss_pred HHHHHHHHHHHHHhcCChhhcCCcc-ccccccHH----------HHHHHHHHHHHhHHHHHHHHHHHHhhccc-hhhcch Q lcl|Aclame:pro 277 ENTELTIRQIATAFGIKMHQLNDLS-KATLNNIE----------QQQQQFYTDTLQATLTMYEQEMTYKLFLD-SELDKG 344 (429) Q Consensus 277 e~~~~~~~~Ia~~fgvp~~~l~~~~-~~~~~n~~----------~~~~~~~~~~l~P~~~~i~~~l~~~ll~~-~~~~~~ 344 (429) ...+.....|+..-++|..-.+... ..++...+ +.....+...+.-+++.|...+...--.. ...... T Consensus 345 ~~~~~L~~~I~~~s~~p~~~~~~~~gn~Sg~Al~~~~~~l~~ka~~k~~~f~~~l~~~~~li~~~~~~~~~~~~~~d~~~ 424 (512) T protein:vir:97 345 AYKDRLNSDIHMFTNTPNMKDDNFSGTQSGEAMKYKLFGLEQRTKTKEGLFTKGLRRRAKLLETILKNTRSIDANKDFNT 424 (512) T ss_pred HHHHHHHHHHHHHhCCcccCcccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccccccc Confidence 6777778888888888775543221 11111111 11223333344444444443332211000 001112 Q ss_pred hhhhhhhhhHhhhhHHHHHHHHHHHHhCCCCCHHHHHHHhCCCCCCC--cceeeecc-ccccccccccccCCCCCCCCCC Q lcl|Aclame:pro 345 FYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEAG--GDRLLVNG-NMLPIDMAGQAYLKGGDTNGEV 421 (429) Q Consensus 345 ~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~Gl~~~~~--gD~~~~~~-n~~~~~~~~~~~~~~g~~~~~~ 421 (429) ..+.| ..-+..+..+.++.+.++ .|+++..-++++++.-+.+. .+.+..-. ...+.........+++..++++ T Consensus 425 i~~~f--~~~~p~~~~e~~~~~~kl--~giiS~et~~~~l~~v~d~~~E~eri~~E~~~~~~~~~~~~~~~~~~~~~~~~ 500 (512) T protein:vir:97 425 VRYVY--NRNLPKSLIEELKAYIDS--GGKISQTTLMSLFSFFQDPELEVKKIEEDEKESIKKAQKGIYKDPRDINDDEQ 500 (512) T ss_pred ceEEe--CCCCCcCHHHHHHHHHHH--hccCchHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCC Confidence 23444 444677888888888887 58899988888887643221 11100000 0000000001111122222222 Q ss_pred CCCCCCCC Q lcl|Aclame:pro 422 SKEGNEGN 429 (429) Q Consensus 422 ~~~~~~~n 429 (429) +.++.+.. T Consensus 501 ~~~~~~~~ 508 (512) T protein:vir:97 501 DDDTKDTV 508 (512) T ss_pred CCCccccc Confidence 22222222 No 182 >protein:vir:99522 Length: 470 # NCBI annotation: putative protein # Family: family:all:125 # MgeID: mge:1559 # MgeName: Lj928 # Cross-refs: genbank:acc:NP_958533;genbank:gi:41179315;genbank:GeneID:2717160 Probab=98.62 E-value=1.9e-07 Score=57.46 Aligned_cols=393 Identities=9% Similarity=0.026 Sum_probs=181.5 Q ss_pred Cc----h----hhhhhcccccccccccccCCchHHHHHh-------hcCCCCcceechhhhhccHHHHHHHHHHHHhhcc Q lcl|Aclame:pro 1 MD----S----VKKFFNFEKRQTSQVIELNKDDEKLLEW-------LGISPSTISVKGKNALKVATVFACIKILSESVSK 65 (429) Q Consensus 1 Mg----~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~ 65 (429) |. + +.++......... +. ...+.+. +..... ..-+..-+.++....+|+..+..+-+ T Consensus 19 ~~~~~~~~~~~i~~~i~~~~~~~~-~~-----~~~l~~Yy~g~~~i~~~~~~--~~~~~~ki~~n~~~~Ivd~~~~~l~g 90 (470) T protein:vir:99 19 FPKGEKLTSNELLGFIAYNETVLK-PR-----YRENMKLYLGKHKILTAPEK--ETGADNRIVVNSAKYVVDVYNGYFCG 90 (470) T ss_pred eCCCCCcCHHHHHHHHHHHHHhhH-HH-----HHHHHHHhccccccccCccc--ccCCcceeecchHHHHHHHHhhhhcc Confidence 11 0 1111000000000 00 0000000 000000 00001112245566777877777777 Q ss_pred CceEEEecCCceeeeeecchhhhhhcccCcCCCCHHHHHHHHHHHHHhhCCeEEEEeeCCCCceEEEEeeCCcceEEEEc Q lcl|Aclame:pro 66 LPLKIYQEDEYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVYID 145 (429) Q Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~PN~~~s~~~~~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~l~p~~v~~~~~ 145 (429) -|+.+...+++.. ...+..++. ..........++.+.+.+|.+|+++..+.+|.+ .+..++|..+.+..+ T Consensus 91 ~p~~~~~~~d~~~----~~~l~~~~~-----~n~~~~~~~~~~~~~~~~G~~~~~v~~d~dg~~-~i~~~~p~~~~~i~d 160 (470) T protein:vir:99 91 IEPKLALLNDSSK----IDEIARWNR-----QENFFDTINEISKQCDIFGRSIASIYQGEDARP-HLMYSSPNHAFIIYD 160 (470) T ss_pred CCeeEeeCCchhH----HHHHHHHHH-----hcCHhHHHHHHHHHHHhcCeeEEEEEeCCCCeE-EEEEEccceeEEEEc Confidence 7777654332211 112333332 235567778889999999999999998888876 577789999988877 Q ss_pred CCcceeeee-eEEEeecccCce----EEEccceEEEeec-------------CCC---------CCcccccCHHHHHHHH Q lcl|Aclame:pro 146 DVGLLNSKT-KMWYVVNTGGQQ----RVLKPEEILHFKN-------------GIT---------LDGLVGVPTMEYLKST 198 (429) Q Consensus 146 ~~~~~~~~~-~~~~~~~~~g~~----~~~~~~evih~~~-------------~~~---------~~~~~G~s~~~~~~~~ 198 (429) ......... ..++....++.. ..+..+.++++.. .++ .+...|.|-++.+... T Consensus 161 ~~~~~~~~~~vr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~vPvv~~~n~~~g~sd~e~v~~l 240 (470) T protein:vir:99 161 DTVQRQPLAFVHYQIDNSNNWTDAYGVIQYADKFYKFKGYDIEEDTNAAGYAINPYGLVPAVEFFENEERQGIFDSIKTL 240 (470) T ss_pred CCCCcceEEEEEEEEEecCCeeEEEEEEEecCeEEEEEecccccccccccccccCCCccceEeecCCCCCCcchHhHHHH Confidence 643221111 111111111111 1122333332211 000 1234688888888888 Q ss_pred HHHHHHHHHHHHHHHHccCCcceEEEeCCCCCHHHHHHHHHHHHHHhcccccccceeec-----CCCceeEecCCChhHH Q lcl|Aclame:pro 199 LENSASADKFINNFYKQGLQVKGLVQYVGDLNEDAKKVFRENFESMSSGLQNSHRIALM-----PVGYQFQPISLNMSDA 273 (429) Q Consensus 199 i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~g~~~~~~~~vl-----~~g~~~~~~~~~~~d~ 273 (429) ++............++..+.|..++.-.....++..+.. ..+.. .+++.+ +++.++..+....... T Consensus 241 iDa~~~~~s~~~~~~~~~~~~~~~i~g~~~~~~~~g~~~-~~~~~--------~~~~~~~~~~~~~~~~~~~l~~~~~~~ 311 (470) T protein:vir:99 241 INALDKVISQKANQVEYFDNAYMYMIGFKLPEDDEGNPK-FDFKN--------NRVLYVSQLDPDTNPQIGFIAKPDADQ 311 (470) T ss_pred HHHHHHHHHHHHHHHHHhcCceeeeecCCcccccccchh-hhhhh--------cceeeecCCCCCCCCcceEEeecCChH Confidence 887777777777777777777766654322222211111 11111 122222 2344444454444444 Q ss_pred HHHHHHHHHHHHHHHHhcCChhhcCCc-cccccccHH----------HHHHHHHHHHHhHHHHHHHHHHHHhhccchhhc Q lcl|Aclame:pro 274 QFLENTELTIRQIATAFGIKMHQLNDL-SKATLNNIE----------QQQQQFYTDTLQATLTMYEQEMTYKLFLDSELD 342 (429) Q Consensus 274 ~~~e~~~~~~~~Ia~~fgvp~~~l~~~-~~~~~~n~~----------~~~~~~~~~~l~P~~~~i~~~l~~~ll~~~~~~ 342 (429) .+.+..+...+.|+..-++|....... +..++...+ +.....+..+|.-+++.+...+..+.-... .. T Consensus 312 ~~~~~~~~l~~~i~~~s~~p~~~~~~~~~n~Sg~Ai~~~~~~l~~k~~~~~~~~~~~l~~~~~li~~~~~~~~~~~~-~~ 390 (470) T protein:vir:99 312 MQENLIQHLTDFIFMMAMVPNIQDKNFAGNSSGVALQYKLFAMKNKADSKERKFDKSLMQLYRIVLATLFNNKQDQE-LW 390 (470) T ss_pred HHHHHHHHHHHHHHHHhCCccccccccccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCccc-cc Confidence 456778888999999999987544322 111111111 112234444555555555544433211111 11 Q ss_pred chhhhhhhhhhHhhhhHHHHHHHHHHHHhCCCCCHHHHHHHhCCCC-CCCcceeeeccccccccccccccCCCCCCCCCC Q lcl|Aclame:pro 343 KGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPP-EAGGDRLLVNGNMLPIDMAGQAYLKGGDTNGEV 421 (429) Q Consensus 343 ~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~Gl~~-~~~gD~~~~~~n~~~~~~~~~~~~~~g~~~~~~ 421 (429) . .+.+.+..-+..+..+.++.+.++. |+++...++++++.-. ....+.+..-. ....... ..... ..+..+ T Consensus 391 ~--~i~v~f~~~~p~~~~e~a~~~~kl~--giis~et~l~~l~~vd~~~E~eri~~E~-~~~~~~~-~~~~~--~~d~~~ 462 (470) T protein:vir:99 391 S--ELDFKFTRNLPEDMASAIDNAKNAE--GIVSKKTQLGMIPDIEPDAEMKQIAKEK-ADAIKQT-QQLSM--PIDILK 462 (470) T ss_pred c--cceEEeCCCCCcCHHHHHHHHHHHh--ccCCHHHHHHhCCCCCHHHHHHHHHHHH-HHHHHHH-HhhcC--CCCcCC Confidence 2 3344445557788889999888874 8899988888876531 11111110000 0000000 00011 111111 Q ss_pred CCCCCCCC Q lcl|Aclame:pro 422 SKEGNEGN 429 (429) Q Consensus 422 ~~~~~~~n 429 (429) .+.++|++ T Consensus 463 ~d~~~ee~ 470 (470) T protein:vir:99 463 RDNNAEEE 470 (470) T ss_pred CCCCccCC Confidence 11111111 No 183 >protein:vir:78805 Length: 511 # NCBI annotation: portal protein # Family: family:all:125 # MgeID: mge:1858 # MgeName: 80alpha # Cross-refs: genbank:acc:YP_001285356;genbank:gi:148717884;genbank:GeneID:5246936 Probab=98.59 E-value=8.5e-08 Score=59.33 Aligned_cols=411 Identities=9% Similarity=0.038 Sum_probs=177.3 Q ss_pred CchhhhhhcccccccccccccCCchHHHHHhhcCCCCcce----ec----hhhhhccHHHHHHHHHHHHhhccCceEEEe Q lcl|Aclame:pro 1 MDSVKKFFNFEKRQTSQVIELNKDDEKLLEWLGISPSTIS----VK----GKNALKVATVFACIKILSESVSKLPLKIYQ 72 (429) Q Consensus 1 Mg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~----~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~ 72 (429) |-..+.+..+..+......+ ....+.+..-....... .. ...=+......-.++..+..+-+-|+.+.. T Consensus 39 ~~~~~~i~~~i~~~~~~~~~---r~~~l~~Yy~g~~~il~~~~~~~~~~~~~~ki~~n~~k~Iv~~~~~yl~g~p~~~~~ 115 (511) T protein:vir:78 39 LQNVNEVSKYIEHHMDYQRP---RLKVLSDYYEGKTKNLVELTRRKEEYMADNRVAHDYASYISDFINGYFLGNPIQYQD 115 (511) T ss_pred hcCHHHHHHHHHHHHHhhhH---HHHHHHHHhhccCccccccCcccccccCcceeecchHHHHHHHHhhhhcccCceeec Confidence 11111111100000000000 00001111100000000 00 000011345566677777777777777643 Q ss_pred cCCceeeeeecchhhhhhcccCcCCCCHHHHHHHHHHHHHhhCCeEEEEeeCCCCceEEEEeeCCcceEEEEcCCccee- Q lcl|Aclame:pro 73 EDEYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVYIDDVGLLN- 151 (429) Q Consensus 73 ~~~~~~~~~~~~~~~~~l~~~PN~~~s~~~~~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~l~p~~v~~~~~~~~~~~- 151 (429) .+++ ....+..++. .-....+...+..+++.+|.+|.++.++.+|.+ .+.+++|..+.++.+...... T Consensus 116 ~d~~-----~~~~l~~~~~-----~n~~~~~~~~~~~~~~~~G~a~~~vy~d~dg~~-~i~~~~p~~~~~v~dd~~~~~~ 184 (511) T protein:vir:78 116 DDKD-----VLEAIEAFND-----LNDVESHNRSLGLDLSIYGKAYELMIRNQDDET-RLYKSDAMSTFIIYDNTVERNS 184 (511) T ss_pred CchH-----HHHHHHHHHh-----hcChhHHHHHHHHHHHhcCeeEEEEEeCCCCce-EEEEEcccceEEEEcCCCCCce Confidence 2221 1122333332 223445667788899999999999999888865 577889999888877543211 Q ss_pred eeeeEEEee-cccC---c----eEEEccceEEEeecCCC----------------C---------CcccccCHHHHHHHH Q lcl|Aclame:pro 152 SKTKMWYVV-NTGG---Q----QRVLKPEEILHFKNGIT----------------L---------DGLVGVPTMEYLKST 198 (429) Q Consensus 152 ~~~~~~~~~-~~~g---~----~~~~~~~evih~~~~~~----------------~---------~~~~G~s~~~~~~~~ 198 (429) .....+|.. ...+ . ...++++.+.++..... . +...|.|-++.+... T Consensus 185 ~~~vr~~~~~~~~~~~~~~~~~~~vyt~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~vPvv~~~n~~~g~gd~e~v~~l 264 (511) T protein:vir:78 185 IAGVRYLRTKPIDKTDEDEVFTVDLFTSHGVYRYLTNRTNGLKLTPRENSFESHSFERMPITEFSNNERRKGDYEKVITL 264 (511) T ss_pred EEEEEEEEeeeccccccceEEEEEEEeCCcEEEEEecCCCcccccccccccccCcCcccceEEecCCCCCCCchhhhHHH Confidence 111111111 1110 0 01234444444422110 0 123578888888888 Q ss_pred HHHHHHHHHHHHHHHHccCCcceEEEeCCCCCHHHHHHHHHHHHHHhccccc-ccceeecCCCceeEecCCChhHHHHHH Q lcl|Aclame:pro 199 LENSASADKFINNFYKQGLQVKGLVQYVGDLNEDAKKVFRENFESMSSGLQN-SHRIALMPVGYQFQPISLNMSDAQFLE 277 (429) Q Consensus 199 i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~g~~~-~~~~~vl~~g~~~~~~~~~~~d~~~~e 277 (429) ++....+.....+.++..+.|-.+++-......++.........-......- ...-.-..++.+...+........+.. T Consensus 265 iDa~~~~~S~~~~~~~~~~~~~lv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~e~ 344 (511) T protein:vir:78 265 IDLYDNAESDTANYMSDLNDAMLLIKGNLNLDPVEVRKQKEANVLFLEPTVYVDAEGRETEGSVDGGYIYKQYDVQGTEA 344 (511) T ss_pred HHHHHHHHHHHHHHHHHhhcchhheecCccCCchhhcccccccceeccccceeccccccCCCCcceeEEeecCCHHHHHH Confidence 8777766666555666666666666544444444333222111000000000 000001122333333333333444567 Q ss_pred HHHHHHHHHHHHhcCChhhcCCcc-ccccccH----------HHHHHHHHHHHHhHHHHHHHHHHHHhhccc-hhhcchh Q lcl|Aclame:pro 278 NTELTIRQIATAFGIKMHQLNDLS-KATLNNI----------EQQQQQFYTDTLQATLTMYEQEMTYKLFLD-SELDKGF 345 (429) Q Consensus 278 ~~~~~~~~Ia~~fgvp~~~l~~~~-~~~~~n~----------~~~~~~~~~~~l~P~~~~i~~~l~~~ll~~-~~~~~~~ 345 (429) ..+...+.|+..-++|....+... ..++... .+.....+...+.-+++.|..-+..+--.. ....... T Consensus 345 ~~~~L~~~I~~~s~~P~~~~~~~~~n~Sg~Al~~~~~~l~~ka~~~~~~f~~~l~~~~~li~~~~~~~~~~~~~~~~~~i 424 (511) T protein:vir:78 345 YKDRLNSDIHMFTNTPNMKDDNFSGTQSGEAMKYKLFGLEQRTKTKEGLFTKGLRRRAKLLETILKNTRSIDANKDFNTV 424 (511) T ss_pred HHHHHHHHHHHHhCCccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccccccccc Confidence 778888899998888875543221 1111111 112233444445555554444433211100 0111123 Q ss_pred hhhhhhhhHhhhhHHHHHHHHHHHHhCCCCCHHHHHHHhCCCCCC--Ccceeeecc-ccccccccccccCCCC----CCC Q lcl|Aclame:pro 346 YSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEA--GGDRLLVNG-NMLPIDMAGQAYLKGG----DTN 418 (429) Q Consensus 346 ~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~Gl~~~~--~gD~~~~~~-n~~~~~~~~~~~~~~g----~~~ 418 (429) .+.| ..-+..+..+.++.+.++ .|+++..-+.+++++-+.+ ..+.+..-. ...+..........++ +.+ T Consensus 425 ~~~f--~~~~p~n~~e~~d~~~kl--~G~iS~et~l~~l~~v~d~~~El~ri~~E~~~~~~~~~~~~~~~~~~~~~~~~~ 500 (511) T protein:vir:78 425 RYVY--NRNLPKSLIEELKAYIDS--GGKISQTTLMSLFSFFQDPELEVKKIEEDEKESIKKAQKGIYKDPRDINDDEQD 500 (511) T ss_pred eEEe--CCCCCcCHHHHHHHHHHH--hccCChHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhhccccCCCCCCCCCCC Confidence 3444 555678888889988888 4889988888887653322 111110000 0000000000001111 111 Q ss_pred CCCCCCCCCCC Q lcl|Aclame:pro 419 GEVSKEGNEGN 429 (429) Q Consensus 419 ~~~~~~~~~~n 429 (429) ++.+...+|.. T Consensus 501 ~~~~~~~~e~~ 511 (511) T protein:vir:78 501 DDTKDTVDKKE 511 (511) T ss_pred CCccCcccccC Confidence 11111112222 No 184 >protein:vir:96366 Length: 511 # NCBI annotation: ORF006 # Family: family:all:125 # MgeID: mge:1613 # MgeName: 53 # Cross-refs: genbank:acc:YP_239644;genbank:gi:66395376;genbank:GeneID:5132842 Probab=98.59 E-value=8.5e-08 Score=59.33 Aligned_cols=411 Identities=9% Similarity=0.038 Sum_probs=177.3 Q ss_pred CchhhhhhcccccccccccccCCchHHHHHhhcCCCCcce----ec----hhhhhccHHHHHHHHHHHHhhccCceEEEe Q lcl|Aclame:pro 1 MDSVKKFFNFEKRQTSQVIELNKDDEKLLEWLGISPSTIS----VK----GKNALKVATVFACIKILSESVSKLPLKIYQ 72 (429) Q Consensus 1 Mg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~----~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~ 72 (429) |-..+.+..+..+......+ ....+.+..-....... .. ...=+......-.++..+..+-+-|+.+.. T Consensus 39 ~~~~~~i~~~i~~~~~~~~~---r~~~l~~Yy~g~~~il~~~~~~~~~~~~~~ki~~n~~k~Iv~~~~~yl~g~p~~~~~ 115 (511) T protein:vir:96 39 LQNVNEVSKYIEHHMDYQRP---RLKVLSDYYEGKTKNLVELTRRKEEYMADNRVAHDYASYISDFINGYFLGNPIQYQD 115 (511) T ss_pred hcCHHHHHHHHHHHHHhhhH---HHHHHHHHhhccCccccccCcccccccCcceeecchHHHHHHHHhhhhcccCceeec Confidence 11111111100000000000 00001111100000000 00 000011345566677777777777777643 Q ss_pred cCCceeeeeecchhhhhhcccCcCCCCHHHHHHHHHHHHHhhCCeEEEEeeCCCCceEEEEeeCCcceEEEEcCCccee- Q lcl|Aclame:pro 73 EDEYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVYIDDVGLLN- 151 (429) Q Consensus 73 ~~~~~~~~~~~~~~~~~l~~~PN~~~s~~~~~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~l~p~~v~~~~~~~~~~~- 151 (429) .+++ ....+..++. .-....+...+..+++.+|.+|.++.++.+|.+ .+.+++|..+.++.+...... T Consensus 116 ~d~~-----~~~~l~~~~~-----~n~~~~~~~~~~~~~~~~G~a~~~vy~d~dg~~-~i~~~~p~~~~~v~dd~~~~~~ 184 (511) T protein:vir:96 116 DDKD-----VLEAIEAFND-----LNDVESHNRSLGLDLSIYGKAYELMIRNQDDET-RLYKSDAMSTFIIYDNTVERNS 184 (511) T ss_pred CchH-----HHHHHHHHHh-----hcChhHHHHHHHHHHHhcCeeEEEEEeCCCCce-EEEEEcccceEEEEcCCCCCce Confidence 2221 1122333332 223445667788899999999999999888865 577889999888877543211 Q ss_pred eeeeEEEee-cccC---c----eEEEccceEEEeecCCC----------------C---------CcccccCHHHHHHHH Q lcl|Aclame:pro 152 SKTKMWYVV-NTGG---Q----QRVLKPEEILHFKNGIT----------------L---------DGLVGVPTMEYLKST 198 (429) Q Consensus 152 ~~~~~~~~~-~~~g---~----~~~~~~~evih~~~~~~----------------~---------~~~~G~s~~~~~~~~ 198 (429) .....+|.. ...+ . ...++++.+.++..... . +...|.|-++.+... T Consensus 185 ~~~vr~~~~~~~~~~~~~~~~~~~vyt~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~vPvv~~~n~~~g~gd~e~v~~l 264 (511) T protein:vir:96 185 IAGVRYLRTKPIDKTDEDEVFTVDLFTSHGVYRYLTNRTNGLKLTPRENSFESHSFERMPITEFSNNERRKGDYEKVITL 264 (511) T ss_pred EEEEEEEEeeeccccccceEEEEEEEeCCcEEEEEecCCCcccccccccccccCcCcccceEEecCCCCCCCchhhhHHH Confidence 111111111 1110 0 01234444444422110 0 123578888888888 Q ss_pred HHHHHHHHHHHHHHHHccCCcceEEEeCCCCCHHHHHHHHHHHHHHhccccc-ccceeecCCCceeEecCCChhHHHHHH Q lcl|Aclame:pro 199 LENSASADKFINNFYKQGLQVKGLVQYVGDLNEDAKKVFRENFESMSSGLQN-SHRIALMPVGYQFQPISLNMSDAQFLE 277 (429) Q Consensus 199 i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~g~~~-~~~~~vl~~g~~~~~~~~~~~d~~~~e 277 (429) ++....+.....+.++..+.|-.+++-......++.........-......- ...-.-..++.+...+........+.. T Consensus 265 iDa~~~~~S~~~~~~~~~~~~~lv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~e~ 344 (511) T protein:vir:96 265 IDLYDNAESDTANYMSDLNDAMLLIKGNLNLDPVEVRKQKEANVLFLEPTVYVDAEGRETEGSVDGGYIYKQYDVQGTEA 344 (511) T ss_pred HHHHHHHHHHHHHHHHHhhcchhheecCccCCchhhcccccccceeccccceeccccccCCCCcceeEEeecCCHHHHHH Confidence 8777766666555666666666666544444444333222111000000000 000001122333333333333444567 Q ss_pred HHHHHHHHHHHHhcCChhhcCCcc-ccccccH----------HHHHHHHHHHHHhHHHHHHHHHHHHhhccc-hhhcchh Q lcl|Aclame:pro 278 NTELTIRQIATAFGIKMHQLNDLS-KATLNNI----------EQQQQQFYTDTLQATLTMYEQEMTYKLFLD-SELDKGF 345 (429) Q Consensus 278 ~~~~~~~~Ia~~fgvp~~~l~~~~-~~~~~n~----------~~~~~~~~~~~l~P~~~~i~~~l~~~ll~~-~~~~~~~ 345 (429) ..+...+.|+..-++|....+... ..++... .+.....+...+.-+++.|..-+..+--.. ....... T Consensus 345 ~~~~L~~~I~~~s~~P~~~~~~~~~n~Sg~Al~~~~~~l~~ka~~~~~~f~~~l~~~~~li~~~~~~~~~~~~~~~~~~i 424 (511) T protein:vir:96 345 YKDRLNSDIHMFTNTPNMKDDNFSGTQSGEAMKYKLFGLEQRTKTKEGLFTKGLRRRAKLLETILKNTRSIDANKDFNTV 424 (511) T ss_pred HHHHHHHHHHHHhCCccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccccccccc Confidence 778888899998888875543221 1111111 112233444445555554444433211100 0111123 Q ss_pred hhhhhhhhHhhhhHHHHHHHHHHHHhCCCCCHHHHHHHhCCCCCC--Ccceeeecc-ccccccccccccCCCC----CCC Q lcl|Aclame:pro 346 YSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEA--GGDRLLVNG-NMLPIDMAGQAYLKGG----DTN 418 (429) Q Consensus 346 ~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~Gl~~~~--~gD~~~~~~-n~~~~~~~~~~~~~~g----~~~ 418 (429) .+.| ..-+..+..+.++.+.++ .|+++..-+.+++++-+.+ ..+.+..-. ...+..........++ +.+ T Consensus 425 ~~~f--~~~~p~n~~e~~d~~~kl--~G~iS~et~l~~l~~v~d~~~El~ri~~E~~~~~~~~~~~~~~~~~~~~~~~~~ 500 (511) T protein:vir:96 425 RYVY--NRNLPKSLIEELKAYIDS--GGKISQTTLMSLFSFFQDPELEVKKIEEDEKESIKKAQKGIYKDPRDINDDEQD 500 (511) T ss_pred eEEe--CCCCCcCHHHHHHHHHHH--hccCChHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhhccccCCCCCCCCCCC Confidence 3444 555678888889988888 4889988888887653322 111110000 0000000000001111 111 Q ss_pred CCCCCCCCCCC Q lcl|Aclame:pro 419 GEVSKEGNEGN 429 (429) Q Consensus 419 ~~~~~~~~~~n 429 (429) ++.+...+|.. T Consensus 501 ~~~~~~~~e~~ 511 (511) T protein:vir:96 501 DDTKDTVDKKE 511 (511) T ss_pred CCccCcccccC Confidence 11111112222 No 185 >protein:vir:80680 Length: 441 # NCBI annotation: gp3 # Family: family:all:524 # MgeID: mge:1884 # MgeName: PA6 # Cross-refs: genbank:acc:YP_001285579;genbank:gi:148727085;genbank:GeneID:5247051 Probab=98.57 E-value=7e-08 Score=59.82 Aligned_cols=378 Identities=9% Similarity=0.015 Sum_probs=167.2 Q ss_pred CchhhhhhcccccccccccccCCchHHHHHhhcCCCC----cceech---hhhhccHHHHHHHHHHHHhhccCceEEEec Q lcl|Aclame:pro 1 MDSVKKFFNFEKRQTSQVIELNKDDEKLLEWLGISPS----TISVKG---KNALKVATVFACIKILSESVSKLPLKIYQE 73 (429) Q Consensus 1 Mg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~---~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~ 73 (429) .-+++++.....+.... ...+-+..-+... ...... ..-..+....-+|+..+..+--..| .. T Consensus 6 ~~~i~~l~~~~~~~~~r-------~~~l~~Yy~G~~~i~~~~~~~~~~~~~~k~~~n~~~~ivd~~~~~l~~~g~---~~ 75 (441) T protein:vir:80 6 LALIEGMYDRIQRLSSW-------HCCIEGYYEGSNRVRDLGVAIPPELQRVQTVVSWPGIAVDALEERLDWLGW---TN 75 (441) T ss_pred HHHHHHHHHHHHHHHHH-------HHHHHHHHhcCCcchhcCcccchhhhhhhhhcchHHHHHHHHHhhhccccc---cC Confidence 22222222211100000 0000000000000 000000 0001122334455555544421112 11 Q ss_pred CCceeeeeecchhhhhhcccCcCCCCHHHHHHHHHHHHHhhCCeEEEEeeCCCCceEEEEeeCCcceEEEEcCCcceeee Q lcl|Aclame:pro 74 DEYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVYIDDVGLLNSK 153 (429) Q Consensus 74 ~~~~~~~~~~~~~~~~l~~~PN~~~s~~~~~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~l~p~~v~~~~~~~~~~~~~ 153 (429) .+ ...+..++.. | +.......+..+++.+|.||+++..+.+|.+ .+.+++|..+.++++........ T Consensus 76 ~d-------~~~l~~i~~~--n---~~~~~~~~~~~~~~~~G~a~~~v~~d~~g~~-~i~~~~p~~~~~i~d~~~~~~~~ 142 (441) T protein:vir:80 76 GD-------GYGLDGVYAA--N---RLATASCDVHLDALIFGLSFVAIIPHGDGTV-SVRPQSPKNCTGKFSADGSRLDA 142 (441) T ss_pred CC-------hHHHHHHHHh--c---CHHHHHHHHHHHHhhcCeeEEEEEeCCCCce-EEEEEccceEEEEEeCCCCceeE Confidence 11 1233344432 2 4577777888999999999999999888876 57889999988877643211111 Q ss_pred eeEEEeec--------------------c-cCceE-------EEccceEEEeecCCCCCcccccCHHHH-HHHHHHHHHH Q lcl|Aclame:pro 154 TKMWYVVN--------------------T-GGQQR-------VLKPEEILHFKNGITLDGLVGVPTMEY-LKSTLENSAS 204 (429) Q Consensus 154 ~~~~~~~~--------------------~-~g~~~-------~~~~~evih~~~~~~~~~~~G~s~~~~-~~~~i~~~~~ 204 (429) ....|... . .+... .|..-.|+||.+.......+|.|-+.. ....++.... T Consensus 143 ~~~~~~~~~~~~~~~~vy~~~~~~~~~~~~~~~~~~~~~~~~~~g~vPvv~~~n~~~~~~~~G~s~l~~~v~~liDa~~~ 222 (441) T protein:vir:80 143 GLVVQQTCDPEVVEAELLLPDVIVQVERRGSREWVEVDRIPNVLGAVPLVPIVNRRRTSRIDGRSEITRSIRAYTDEAVR 222 (441) T ss_pred EEEEEEEecCceEEEEEEecCeEEEEEEcCCcceeeccccccCCCceeEEEeeccccCCccCCcccchhhHHHHHHHHHH Confidence 11111110 1 11111 112223677776555566678886543 4445555444 Q ss_pred HHHHHHHHHHccCCcceEEEeCCCCCHHHHHHHHHHHHHHhcccccccceeecCC-----CceeEecCCChhHHHHHHHH Q lcl|Aclame:pro 205 ADKFINNFYKQGLQVKGLVQYVGDLNEDAKKVFRENFESMSSGLQNSHRIALMPV-----GYQFQPISLNMSDAQFLENT 279 (429) Q Consensus 205 ~~~~~~~~~~ng~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~g~~~~~~~~vl~~-----g~~~~~~~~~~~d~~~~e~~ 279 (429) .........+..+.|..++.- ...+++..+. ++. ..++++.+++ +.++.++..+..+ .+++.. T Consensus 223 ~~s~~~~~~~~~~~~~~~i~G-~~~~~~~~~~----~~~------~~~~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l 290 (441) T protein:vir:80 223 TLLGQSVNRDFYAYPQRWVTG-VSADEFSQPG----WVL------SMASVWAVDKDDDGDTPNVGSFPVNSPT-PYSDQM 290 (441) T ss_pred HHHHHHHHHHhhcCceeeeec-CCccccccch----hhh------cccccccCCCCCCCCcceeEecCccchH-HHHHHH Confidence 444444455555566555542 1222221111 111 1123443332 2455544433333 267888 Q ss_pred HHHHHHHHHHhcCChhhcCCccccccc--cHHHH----------HHHHHHHHHhHHHHHHHHHHHHhhccchhhcchhhh Q lcl|Aclame:pro 280 ELTIRQIATAFGIKMHQLNDLSKATLN--NIEQQ----------QQQFYTDTLQATLTMYEQEMTYKLFLDSELDKGFYS 347 (429) Q Consensus 280 ~~~~~~Ia~~fgvp~~~l~~~~~~~~~--n~~~~----------~~~~~~~~l~P~~~~i~~~l~~~ll~~~~~~~~~~~ 347 (429) +..+..++..-++|+..+++......| ..+.. ....+...|.-+++.+...++...-.. .....+ T Consensus 291 ~~~i~~~~~~~~~p~~~~g~~~~~~~Sg~Al~~~~~~l~~k~~~~~~~f~~~l~~~~~l~~~~~~~~~~~~---~~~~~i 367 (441) T protein:vir:80 291 RLLAQLTAGEAAVPERYFGFITSNPPSGEALAAEESRLVKRAERRQTSFGQGWLSVGFLAAKALDSRVDEA---DFFGDV 367 (441) T ss_pred HHHHHHHhcccCCCHHHhccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccc---ccceee Confidence 899999999999999988764432111 11111 122222233333333332222111000 011233 Q ss_pred hhhhhhHhhhhHHHHHHHHHHHHhCCCCC--HHHHHHHhCCCCCCCcceeeec--cccccccc-cccccCCCCCC Q lcl|Aclame:pro 348 KFNVDAILRADIKTRYEAYRTGIQGGFLK--PNEARSKEDLPPEAGGDRLLVN--GNMLPIDM-AGQAYLKGGDT 417 (429) Q Consensus 348 ~fd~~~l~~~d~~~~~~~~~~~~~~g~~t--~NE~R~~~Gl~~~~~gD~~~~~--~n~~~~~~-~~~~~~~~g~~ 417 (429) ++.+..-...+..+.++.+.+++.+|++. ...+++.+|+.+.+-- ++..- ....++.. .+....+..+. T Consensus 368 ~~~f~~~~~~~~~e~ad~~~kl~~~g~~~~s~~~~~~~l~~~~~e~~-~~~~e~~e~~~~~~~~~~~~~~~~~~~ 441 (441) T protein:vir:80 368 GLRWRDASTPTRAATADAVTKLVGAGILPADSRTVLEMLGLDDVQVE-AVMRHRAESSDPLAVLAGAISRQTNEV 441 (441) T ss_pred eEEeCCCCCcCHHHHHHHHHHHHhcCcccccHHHHHHhCCCCHHHHH-HHHHHHHHHHHHHHHHhhhhhcccccC Confidence 44445556788899999999999999753 4457888888654310 00000 00000000 00000000111 No 186 >protein:vir:2732 Length: 501 # NCBI annotation: putative portal protein # Family: family:all:125 # MgeID: mge:58 # MgeName: O1205 # Cross-refs: genbank:acc:NP_695105;genbank:gi:23455874;genbank:GeneID:955614 Probab=98.56 E-value=2.8e-07 Score=56.52 Aligned_cols=407 Identities=11% Similarity=0.012 Sum_probs=186.4 Q ss_pred CchhhhhhcccccccccccccCCchHHHHHhh-cCCC-------CcceechhhhhccHHHHHHHHHHHHhhccCceEEEe Q lcl|Aclame:pro 1 MDSVKKFFNFEKRQTSQVIELNKDDEKLLEWL-GISP-------STISVKGKNALKVATVFACIKILSESVSKLPLKIYQ 72 (429) Q Consensus 1 Mg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-------~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~ 72 (429) +..++.+.+...+......+ ....+.++. |... .........-+..+....+++..+..+-+-|+.+.. T Consensus 38 ~~~~~~l~~~i~~~~~~~~~---r~~~l~~yY~g~~~~i~~~~~~~~~~~~~~ki~~n~~k~Ivd~~~~yl~g~p~~~~~ 114 (501) T protein:vir:27 38 VNNWELLKNFINHHKLRQAP---RIQELLDYARGENHDVLQFGRRKDREMADKRAVHNYGRMISKFKTGYLAGNPIRVEY 114 (501) T ss_pred cccHHHHHHHHHHHHHHHHH---HHHHHHHHhcCCCccccccCccCccccccceeccchHHHHHHHHhhhhcccCeeEec Confidence 22111111111100000000 000011111 1000 000000001122456677888888888887877755 Q ss_pred cCCceeeeeecchhhhhhcccCcCCCCHHHHHHHHHHHHHhhCCeEEEEeeCCCCceEEEEeeCCcceEEEEcCCcce-e Q lcl|Aclame:pro 73 EDEYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVYIDDVGLL-N 151 (429) Q Consensus 73 ~~~~~~~~~~~~~~~~~l~~~PN~~~s~~~~~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~l~p~~v~~~~~~~~~~-~ 151 (429) .+++.. ..+...|. +-...-........+..+++.+|.+|+++.++.+|.+ .+-.++|..+.++.+..... . T Consensus 115 ~d~~~~-----~~~~~~l~-~~~~~n~~~~~~~~~~~~~~~~G~a~~~vy~ded~~~-~i~~~~p~~~~~v~d~~~~~~~ 187 (501) T protein:vir:27 115 DDNDNN-----SQNDDTIK-RIGRINDIDSHNRTLIRDLSQTGRAYEVIYRNEYDET-RIKRLNPLETFVIYDNSLEDNS 187 (501) T ss_pred CCccch-----HHHHHHHH-HHHHhcChhHHHHHHHHHHhhCCeEEEEEEeCCCCce-EEEEEccceeEEEecCCCCCce Confidence 443221 12222222 1222234567788889999999999999999888865 46778899988877653211 1 Q ss_pred eeeeEEEeec-ccCc---eEEEccce------------------------EEEeecCCCCCcccccCHHHHHHHHHHHHH Q lcl|Aclame:pro 152 SKTKMWYVVN-TGGQ---QRVLKPEE------------------------ILHFKNGITLDGLVGVPTMEYLKSTLENSA 203 (429) Q Consensus 152 ~~~~~~~~~~-~~g~---~~~~~~~e------------------------vih~~~~~~~~~~~G~s~~~~~~~~i~~~~ 203 (429) .....+|... ..+. ...++++. |++++ +...|.|.+..+...++... T Consensus 188 ~~~ir~~~~~~~~~~~~~~~vyt~~~v~~~~~~~~~~~~~~~~~~~g~vPvv~~~-----nn~~g~sd~e~v~~liDa~d 262 (501) T protein:vir:27 188 IAAVRYYNRGTLQNAKDVVEIYTNEHIYTLDASDDFNEISVTTHAFGTVPITEFL-----NNVDGIGDYETELYLIDLYD 262 (501) T ss_pred EEEEEEEEeeecCCcEEEEEEEeCCeEEEEEeCCceeeccccccCCCcccEEEec-----CCCCCCCchhhhHHHHHHHH Confidence 1111111111 1111 01122222 33332 12468888888888888777 Q ss_pred HHHHHHHHHHHccCCcceEEEeCCCC-CHHHHHHHHHHHHHHhcccccccceeecCCCceeEecCCChhHHHHHHHHHHH Q lcl|Aclame:pro 204 SADKFINNFYKQGLQVKGLVQYVGDL-NEDAKKVFRENFESMSSGLQNSHRIALMPVGYQFQPISLNMSDAQFLENTELT 282 (429) Q Consensus 204 ~~~~~~~~~~~ng~~~~~~~~~~~~~-~~e~~~~~~~~~~~~~~g~~~~~~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~ 282 (429) .+.....+.++..+.|-.++.-.... .++....++.. ..-.....+.....+++.++..+.....+..+....+.. T Consensus 263 ~~~S~~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l 339 (501) T protein:vir:27 263 SAESDTANHMSDMADAILAIYGDLALPKGMQASDMKRT---RLMQLKPPKSADGKEGTVKAEYLTKSYDVSGAEAYKTRL 339 (501) T ss_pred HHHHHHHHHHHHhcCceeeeecCccCCcccchhhhhhc---CceeecccccccCCCCCcceeeeeccCCHHHHHHHHHHH Confidence 77777777777766676666542222 22332222211 000111111122234455555554444444566777888 Q ss_pred HHHHHHHhcCChhhcCCc-cccccccHH----------HHHHHHHHHHHhHHHHHHHHHHHHhhccchhhcchhhhhhhh Q lcl|Aclame:pro 283 IRQIATAFGIKMHQLNDL-SKATLNNIE----------QQQQQFYTDTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNV 351 (429) Q Consensus 283 ~~~Ia~~fgvp~~~l~~~-~~~~~~n~~----------~~~~~~~~~~l~P~~~~i~~~l~~~ll~~~~~~~~~~~~fd~ 351 (429) .+.|+..-++|....+.. +..++...+ ......+...+.-+++.+...++..--........ +.+.+ T Consensus 340 ~~~I~~~s~~p~~~~~~~~~n~Sg~Al~~~~~~l~~ka~~~~~~~~~~l~~~~~li~~~~~~~~~~~~~d~~~--i~v~f 417 (501) T protein:vir:27 340 NRDIHIFTNIPDMSDTNFSGNTSGEALKYKLFGLDQDRVDTQSQFTQGLKRRYRLAARIGSLVNEFKDFDESL--LKITF 417 (501) T ss_pred HHHHHHHhCCcccCccccccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccc--ceEEe Confidence 889999888886544322 211211111 12224444555555555555443221111111122 33444 Q ss_pred hhHhhhhHHHHHHHHHHHHhCCCCCHHHHHHHhCCCCCC--Ccceeeecc-ccccccccccccCCCCCCCCCCCCCCCCC Q lcl|Aclame:pro 352 DAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEA--GGDRLLVNG-NMLPIDMAGQAYLKGGDTNGEVSKEGNEG 428 (429) Q Consensus 352 ~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~Gl~~~~--~gD~~~~~~-n~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 428 (429) ..-+..+..+.++.+.++ +|+++..-+.+++++-..| ..+.+..-. ...+-...+.-....+...++.++.++|+ T Consensus 418 ~~~~p~n~~e~ad~~~kl--~g~iS~et~l~~l~~v~D~~~E~eri~~E~~e~~~~~~~~~~~~~~~~~~d~~~~~~~d~ 495 (501) T protein:vir:27 418 TPNLPKSLNEQVSILTGL--GGQVSQETALSLSGLVESPNEELDKINKEVSEIDFKGYSNDFNEHVGKYTDEVKETHTDD 495 (501) T ss_pred CCCCCcCHHHHHHHHHHH--hccCcHHHHHHhCCCCCCHHHHHHHHHHHHHhhhHhhhcCccccccccccCCCCCCcccc Confidence 556778888889888887 5889988888888654322 111110000 00000000000011112222222222222 Q ss_pred C Q lcl|Aclame:pro 429 N 429 (429) Q Consensus 429 n 429 (429) . T Consensus 496 ~ 496 (501) T protein:vir:27 496 F 496 (501) T ss_pred c Confidence 2 No 187 >protein:vir:103219 Length: 201 # NCBI annotation: hypothetical protein # Family: family:all:297 # MgeID: mge:1605 # MgeName: JK06 # Cross-refs: genbank:acc:YP_277473;genbank:gi:71834115;genbank:GeneID:3562330 Probab=98.53 E-value=3.1e-09 Score=67.27 Aligned_cols=182 Identities=14% Similarity=0.166 Sum_probs=96.5 Q ss_pred EEEeCCC--CCHHHHHHHHHHHH--HHhcccccccceeecCCCceeEecCCChhHHHHHHHHHHHHHHHHHHhcCChhhc Q lcl|Aclame:pro 222 LVQYVGD--LNEDAKKVFRENFE--SMSSGLQNSHRIALMPVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQL 297 (429) Q Consensus 222 ~~~~~~~--~~~e~~~~~~~~~~--~~~~g~~~~~~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~fgvp~~~l 297 (429) |++.++- +.......+++++. ..+.+ +.+.+.+...+-+|+.++.+..-+ .+........||.+-|||...| T Consensus 1 V~k~~~l~~~~~~~~~~~~~r~~~~~~~~~--~~~~~~ld~~~e~~e~~~~~lsGl--~d~l~~~~~~iaa~s~iP~t~L 76 (201) T protein:vir:10 1 MWKAKGLADLCDDSDGAARLRLAQVDNNSG--VGQAIGIDADSEEYNVLNSDIGGI--DTFLSQKFDRIVALSGIHEIIL 76 (201) T ss_pred CccchHHHHHhcCChHHHHHHHHHHHHhhh--hhhhheeecCCcceeeeecCcCCh--HHHHHHHHHHHHhHhcCchhhh Confidence 4444321 11111123334443 33333 234456666667888887776655 4678888999999999999988 Q ss_pred CCccccccc-cHHHHHHHHH-------HHHHhHHHHHHHHHHHHhhccchhhcchhhhhhhhhhHhhhhHHHHHH----- Q lcl|Aclame:pro 298 NDLSKATLN-NIEQQQQQFY-------TDTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAILRADIKTRYE----- 364 (429) Q Consensus 298 ~~~~~~~~~-n~~~~~~~~~-------~~~l~P~~~~i~~~l~~~ll~~~~~~~~~~~~fd~~~l~~~d~~~~~~----- 364 (429) -+.+.+..+ +.+.-.+.|| +.-+.|.++.+-.-+ . +..++.++| ..|...+.+++++ T Consensus 77 fG~sp~Glnatge~d~~nyyd~i~~~Qe~~l~p~le~l~~~~----~----~~~~~~~~f--~pL~~~s~kekAei~~~~ 146 (201) T protein:vir:10 77 KGKNVGGVSASQNTALETFYGYVDRKRKAELLPLLEFLLPFI----V----TEQEWSVEF--NPLSQVSDKDKSEILEKN 146 (201) T ss_pred cCCCCccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhh----c----CCCCceEee--CCCCCCCHHHHHHHHHHH Confidence 665554332 2333333333 344566665544422 1 223444554 6677777665554 Q ss_pred --HHHHHHhCCCCCHHHHHHHhCCCCCCCcceeeeccccccccccccccCCCCCCCCCCCCCCCCCC Q lcl|Aclame:pro 365 --AYRTGIQGGFLKPNEARSKEDLPPEAGGDRLLVNGNMLPIDMAGQAYLKGGDTNGEVSKEGNEGN 429 (429) Q Consensus 365 --~~~~~~~~g~~t~NE~R~~~Gl~~~~~gD~~~~~~n~~~~~~~~~~~~~~g~~~~~~~~~~~~~n 429 (429) ++.+++.+|+++++|+|+.|--.+..++ ++.+..+.+. .....+.+.+..++| T Consensus 147 a~a~~~~~~~g~i~~~e~r~~L~~~~~~~~----~~~~~~~~~~--------~~~e~~dp~~~~~~~ 201 (201) T protein:vir:10 147 VNSVAALIAAGIIDADEARDTLRAISTEVK----IGEGSIQTEV--------VINESEDPLDVSANN 201 (201) T ss_pred HHHHHHHHHcCCCCHHHHHHHHHhcCCcCC----CCCCCCCccc--------cccccCCCCCCCCCC Confidence 5677889999999999998755443221 1111111110 011112222223333 No 188 >protein:vir:99781 Length: 511 # NCBI annotation: portal protein # Family: family:all:125 # MgeID: mge:1497 # MgeName: phiETA2 # Cross-refs: genbank:acc:YP_001004303;genbank:gi:122891757;genbank:GeneID:4712336 Probab=98.52 E-value=2.2e-07 Score=57.10 Aligned_cols=410 Identities=9% Similarity=0.035 Sum_probs=174.4 Q ss_pred Cchhhhhhc-------------------------ccccccccccccCCchHHHHHhhcCCCCcce----ec----hhhhh Q lcl|Aclame:pro 1 MDSVKKFFN-------------------------FEKRQTSQVIELNKDDEKLLEWLGISPSTIS----VK----GKNAL 47 (429) Q Consensus 1 Mg~~~~~~~-------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~----~~~a~ 47 (429) -|=++..|+ +..+......+ ....+.+..-....... .. +..=+ T Consensus 14 ~~~~~~~~~~~~n~~~~~~~~e~~~~~~~~~i~~~i~~~~~~~~~---r~~~l~~Yy~g~~~i~~~~~~~~~~~~~~~ki 90 (511) T protein:vir:99 14 RGNINYLFNDEANVVYTYDGTESDLLQNVNEVSKYIEHHMDYQRP---RLKVLSDYYEGKTKNLVELTRRKEEYMADNRV 90 (511) T ss_pred hhhhhhhhhhhhCCccccchhhhhhhccHHHHHHHHHHHHHhhHH---HHHHHHHHhcccCccccccCcccccccCccee Confidence 111111111 00000000000 00001111110000000 00 00001 Q ss_pred ccHHHHHHHHHHHHhhccCceEEEecCCceeeeeecchhhhhhcccCcCCCCHHHHHHHHHHHHHhhCCeEEEEeeCCCC Q lcl|Aclame:pro 48 KVATVFACIKILSESVSKLPLKIYQEDEYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKG 127 (429) Q Consensus 48 ~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~~~~~~~~~~~~~l~~~PN~~~s~~~~~~~~~~~~l~~G~~~~~~~~~~~g 127 (429) -.......++..+..+-+-|+.+...+++ ....+..++.. -........+..+++.+|.+|+++.++.+| T Consensus 91 ~~n~~k~Iv~~~~~yl~g~p~~~~~~d~~-----~~~~l~~~~~~-----n~~~~~~~~~~~~~~i~G~a~~~vy~ded~ 160 (511) T protein:vir:99 91 AHDYASYISDFINGYFLGNPIQYQDDDKD-----VLEAIEAFNDL-----NDVESHNRSLGLDLSIYGKAYELMIRNQDD 160 (511) T ss_pred ecchHHHHHHHHHhhhcccCceeecCchH-----HHHHHHHHHhh-----cCHhHHHHHHHHHHHhcCeeEEEEEeCCCC Confidence 12445566777777777777776433221 11223333321 245566677888999999999999998888 Q ss_pred ceEEEEeeCCcceEEEEcCCccee-eeeeEEEee-cccC---c----eEEEccceEEEeecCC----------------C Q lcl|Aclame:pro 128 KVQALWPIDASKVTVYIDDVGLLN-SKTKMWYVV-NTGG---Q----QRVLKPEEILHFKNGI----------------T 182 (429) Q Consensus 128 ~~~~l~~l~p~~v~~~~~~~~~~~-~~~~~~~~~-~~~g---~----~~~~~~~evih~~~~~----------------~ 182 (429) .+ .+..++|..+.++.+...... .....+|.. ...+ . ...+.+..+.+++... + T Consensus 161 ~~-~i~~~~p~~~~~vyd~~~~~~~~~~vr~~~~~~~~~~~~~~~~~~~vyt~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 239 (511) T protein:vir:99 161 ET-RLYKSDAMSTFVIYDNTIERNSIAGVRYLRTKPIDKTDEDEVFTVDLFTSHGVYRYLTSRTNGLKLTPRENGFESHS 239 (511) T ss_pred ce-EEEEEccceeEEEEcCCCCCceEEEEEEEEeeecccCccceEEEEEEEeCCcEEEEEecCCccccccccccccccCC Confidence 65 677889999888776542111 111111111 0000 0 0123344444432110 0 Q ss_pred ---------CCcccccCHHHHHHHHHHHHHHHHHHHHHHHHccCCcceEEEeCCCCCHHHHHHHHHHHHHHhcccc-ccc Q lcl|Aclame:pro 183 ---------LDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGDLNEDAKKVFRENFESMSSGLQ-NSH 252 (429) Q Consensus 183 ---------~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~g~~-~~~ 252 (429) .+...|.|-++.+...++....+.....+.++..+.|-.+++-....+.++....++.-.-...... -.+ T Consensus 240 ~g~vPvv~~~nn~~g~sd~e~v~~liDa~d~~~S~~~~~~~~~~~~~lv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (511) T protein:vir:99 240 FERMPITEFSNNERRKGDYEKVITLIDLYDNAESDTANYMSDLNDAMLLIKGNLNLDPVEVRKQKEANVLFLEPTVYADS 319 (511) T ss_pred CCccceEEecCCCCCCCchhhhHHHHHHHHHHHHHHHHHHHHhhchhhhhccCcccCchhhcccccccceeccccccccc Confidence 0123578888888777776666666666656665666555543333333333222211000000000 001 Q ss_pred ceeecCCCceeEecCCChhHHHHHHHHHHHHHHHHHHhcCChhhcCCc-cccccccHHH----------HHHHHHHHHHh Q lcl|Aclame:pro 253 RIALMPVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDL-SKATLNNIEQ----------QQQQFYTDTLQ 321 (429) Q Consensus 253 ~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~fgvp~~~l~~~-~~~~~~n~~~----------~~~~~~~~~l~ 321 (429) ...-.++|.++..+........+....+...+.|+..-++|....... +..++...+. .....+...+. T Consensus 320 ~~~~~~~~~d~~~l~~~~~~~~~e~~~~~L~~~I~~~s~~P~~~~~~~~gn~Sg~Alk~~~~~l~~ka~~k~~~~~~~l~ 399 (511) T protein:vir:99 320 EGRETEGSVDGGYIYKQYDVQGTEAYKDRLNSDIHMFTNTPNMKDDNFSGTQSGEAMKYKLFGLEQRTKTKEGLFTKGLR 399 (511) T ss_pred ccccCCCCcceeEEeecCCHHHHHHHHHHHHHHHHHHhCCcccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHH Confidence 111223455555544444445556778888889999888887544322 1111111111 11233333344 Q ss_pred HHHHHHHHHHHHhhcc-chhhcchhhhhhhhhhHhhhhHHHHHHHHHHHHhCCCCCHHHHHHHhCCCCCCC--cceee-- Q lcl|Aclame:pro 322 ATLTMYEQEMTYKLFL-DSELDKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEAG--GDRLL-- 396 (429) Q Consensus 322 P~~~~i~~~l~~~ll~-~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~Gl~~~~~--gD~~~-- 396 (429) -+++.|...+..+--. .........+.| ..-+..+..+.++.+.++ .|+++..-++++++.-+.+. .+.+. T Consensus 400 ~~~~li~~~~~~~~~~~~~~~~~~i~i~f--~~~~p~n~~e~~~~~~kl--~GiiS~et~l~~l~~v~D~~~E~~ri~~E 475 (511) T protein:vir:99 400 RRAKLLETILKNTRSIDVSKDFNTVRYVY--NRNLPKSLIEELKAYIDS--GGKISQTTLMSLFSFFQDPELEVKKIEED 475 (511) T ss_pred HHHHHHHHHHHhcCCcccccccccceEEe--CCCCCcCHHHHHHHHHHH--hccCCHHHHHHhCCCCCCHHHHHHHHHHH Confidence 4444444333221100 001111223444 444678888899988887 48899988888886533221 11000 Q ss_pred ----eccccccccccccccCCCCCCCCCCCCCCCCCC Q lcl|Aclame:pro 397 ----VNGNMLPIDMAGQAYLKGGDTNGEVSKEGNEGN 429 (429) Q Consensus 397 ----~~~n~~~~~~~~~~~~~~g~~~~~~~~~~~~~n 429 (429) .+....+..... .....++.+++++.++++.- T Consensus 476 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~d~~e 511 (511) T protein:vir:99 476 EKESIKKAQKNMYQDP-RNINDDEQDDSTKDSIDKKE 511 (511) T ss_pred HHHHHHHHhhcccccC-CCCCCCCCCCCCcCcccccC Confidence 000000000000 00000111111111111111 No 189 >protein:vir:79043 Length: 479 # NCBI annotation: putative portal protein # Family: family:all:125 # MgeID: mge:1861 # MgeName: phiC2 # Cross-refs: genbank:acc:YP_001110721;genbank:gi:134287338;genbank:GeneID:4955217 Probab=98.47 E-value=5.3e-07 Score=55.01 Aligned_cols=383 Identities=10% Similarity=0.008 Sum_probs=177.7 Q ss_pred CchhhhhhcccccccccccccCCchHHHHHhhcCCCCcc------------eec---hhhhhccHHHHHHHHHHHHhhcc Q lcl|Aclame:pro 1 MDSVKKFFNFEKRQTSQVIELNKDDEKLLEWLGISPSTI------------SVK---GKNALKVATVFACIKILSESVSK 65 (429) Q Consensus 1 Mg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~---~~~a~~~~~v~~~i~~ia~~ia~ 65 (429) ..+++.+.+..+.. ....+.++.-...... ... ...=+.++....+++..+..+-+ T Consensus 25 ~~~i~~~~~~~~~~---------~~~~~~~yy~g~~~i~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~~Ivd~~~~~l~g 95 (479) T protein:vir:79 25 VKVIEHYILKHRPE---------KYKQGEEYYYGNTDVNNKRRYYLLDGAKVDDFTKVNNKAINNYHKLLVDQKVGYSVG 95 (479) T ss_pred HHHHHHHHhhhhHH---------HHHHHHHHhccCCcccccccccccccccccccccCcceeecchHHHHHHHHHhhhhc Confidence 11111111100000 0011111110000000 000 00002245566678888888877 Q ss_pred CceEEEecCCceeeeeecchhhhhhcccCcCCCCHHHHHHHHHHHHHhhCCeEEEEeeCCCCceEEEEeeCCcceEEEEc Q lcl|Aclame:pro 66 LPLKIYQEDEYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVYID 145 (429) Q Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~PN~~~s~~~~~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~l~p~~v~~~~~ 145 (429) -|+.+...++.. ..+...+.. | ........++...+.+|.+|.++..+..|.+ .+..++|..+.++.+ T Consensus 96 ~p~~~~~~~~~~------~~~~~~~~~--n---~~~~~~~~~~~~~~~~G~~~~~v~~d~~~~~-~i~~~~p~~~~~v~d 163 (479) T protein:vir:79 96 NPIVFNADDDNL------TKLLNDLLG--E---EFDDTITELYLNASNKGVEWLHPYINRKGEF-KYVIIPAEEAIPIWD 163 (479) T ss_pred CCceeccCCHHH------HHHHHHHHh--c---CHHHHHHHHHHHHHhcCeEEEEEEeCCCCce-EEEEEccceeEEEEe Confidence 787764322211 122333322 2 3456667778899999999999988888875 477789999888876 Q ss_pred CCcce--eeeeeEEEeecccCce----EEEccceEEEeecC------------------------------CC------- Q lcl|Aclame:pro 146 DVGLL--NSKTKMWYVVNTGGQQ----RVLKPEEILHFKNG------------------------------IT------- 182 (429) Q Consensus 146 ~~~~~--~~~~~~~~~~~~~g~~----~~~~~~evih~~~~------------------------------~~------- 182 (429) ..... ......|.....++.. ..+.+..+.|++.. ++ T Consensus 164 ~~~~~~~~~~ir~y~~~~~~~~~~~~~e~y~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vPvv 243 (479) T protein:vir:79 164 SKRQRELVAFIRFYYIEDIDGNKIKRVEYYTENDITYFIERGNSFIQEFLYDEYGKMTDIQEGHFRINNKEQGWGKVPFI 243 (479) T ss_pred CCCCCceEEEEEEEEEeecCCceEEEEEEEeCCcEEEEEecCCcccccccccccccccccccccccccccccCCCcccEE Confidence 53221 1111111111112211 11223333332210 00 Q ss_pred --CCcccccCHHHHHHHHHHHHHHHHHHHHHHHHccCCcceEEEeCCCCCHHHHHHHHHHHHHHhcccccccceeecCCC Q lcl|Aclame:pro 183 --LDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGDLNEDAKKVFRENFESMSSGLQNSHRIALMPVG 260 (429) Q Consensus 183 --~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~g~~~~~~~~vl~~g 260 (429) .+...|.|-+..+...++....+.....+.++..+.|-.+++.-.... .+...... ..++++.++++ T Consensus 244 ~~~nn~~g~sd~~~v~~liDa~d~~~S~~~~~~~~~~~~~~v~~g~~~~~---~~~~~~~~--------~~~~~i~~~~~ 312 (479) T protein:vir:79 244 PFKNNEKCVSDLTFYKSLIDIYDNNISTLADNLDEIQEVIYVLKEYPGTS---LQEFIDNI--------RYYKSIKVDGG 312 (479) T ss_pred EecCCCCCCcchhhhHHHHHHHHHHHHHHHHHHHHhhCceeeeecCCccc---cccchhhh--------hhccceecCCC Confidence 012357888888888887777776666666777777766655321111 11111111 12345556655 Q ss_pred ceeEecCCChhHHHHHHHHHHHHHHHHHHhcCChhhcCCccccccccH----------HHHHHHHHHHHHhHHHHHHHHH Q lcl|Aclame:pro 261 YQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKATLNNI----------EQQQQQFYTDTLQATLTMYEQE 330 (429) Q Consensus 261 ~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~fgvp~~~l~~~~~~~~~n~----------~~~~~~~~~~~l~P~~~~i~~~ 330 (429) .+++.+........+.+..+.....|+..-++|..-.+..+..++... .......+...+..+++.+... T Consensus 313 ~~~~~l~~~~~~~~~~~~~~~l~~~i~~~s~~p~~~~~~~gn~Sg~Ai~~~~~~l~~k~~~~~~~~~~~l~~~~~li~~~ 392 (479) T protein:vir:79 313 GGVDKLEINIPVEAKKELLDRLEKNIIIFGQGVNPESQNTGDKSGVALKFLYSLLDLKCSKTEKKFKKAIRELLWFVCEY 392 (479) T ss_pred CcceEEeccCCHHHHHHHHHHHHHHHHHHhCccccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Confidence 554444444344556677888888888888887654432222221111 1122334444555555555544 Q ss_pred HHHhhccchhhcchhhhhhhhhhHhhhhHHHHHHHHHHHHhCCCCCHHHHHHHhCCCCCCC--cceeeeccccccccccc Q lcl|Aclame:pro 331 MTYKLFLDSELDKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEAG--GDRLLVNGNMLPIDMAG 408 (429) Q Consensus 331 l~~~ll~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~Gl~~~~~--gD~~~~~~n~~~~~~~~ 408 (429) +..+-... . ....+.+.+..-...+..+.++.+.++ +|+++...+.++++.-+.+. .+.+ ...-.. ... T Consensus 393 ~~~~~~~~-~--~~~~i~i~f~~~~p~~~~~~a~~~~kl--~g~iS~et~l~~l~~v~d~~~E~~ri--~~E~~~--~~~ 463 (479) T protein:vir:79 393 LKISGNKS-Y--DYKTVQITFNHSMIINEAEKIDMAAKS--TGIVSDETIVSNHPWVEDVNDELERL--KKQEDT--QKE 463 (479) T ss_pred HhccCCCc-c--ccccceEEeCCCCCcCHHHHHHHHHHH--hccCcHHHHHHhCCCCCCHHHHHHHH--HHHHHH--HHH Confidence 43221111 1 112334444555677888889888887 58999988988887533221 1100 000000 000 Q ss_pred cccCCCCCCCCCCCCCC Q lcl|Aclame:pro 409 QAYLKGGDTNGEVSKEG 425 (429) Q Consensus 409 ~~~~~~g~~~~~~~~~~ 425 (429) ....-.+ ......+++ T Consensus 464 ~~~~~~~-~~~~~~~e~ 479 (479) T protein:vir:79 464 YDDLIPN-NQDGVIDET 479 (479) T ss_pred HHhccCc-ccCCCcCcC Confidence 0000000 000000011 No 190 >protein:vir:96266 Length: 474 # NCBI annotation: ORF007 # Family: family:all:125 # MgeID: mge:1612 # MgeName: ROSA # Cross-refs: genbank:acc:YP_240308;genbank:gi:66395972;genbank:GeneID:5133343 Probab=98.44 E-value=6.4e-07 Score=54.53 Aligned_cols=385 Identities=11% Similarity=0.064 Sum_probs=175.1 Q ss_pred Cch----hhhhhcccccccccccccCCchHHHHHhhcCCCCcc-------------eechhhhhccHHHHHHHHHHHHhh Q lcl|Aclame:pro 1 MDS----VKKFFNFEKRQTSQVIELNKDDEKLLEWLGISPSTI-------------SVKGKNALKVATVFACIKILSESV 63 (429) Q Consensus 1 Mg~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~a~~~~~v~~~i~~ia~~i 63 (429) .-+ +.++....... .. ....+.++.-...... ..-+..=+.++.....++..++.+ T Consensus 25 ~~~~~~~i~~~i~~~~~~----~~---~~~~l~~Yy~g~~~i~~~~~~~~~~~~~~~~~~~~ki~~n~~k~Iv~~~~~yl 97 (474) T protein:vir:96 25 VETQEEMIIRLINNHKQK----LK---DINVGQKYYDKDNDINYQAYKQDLHGNIDYTKPDWRITTNFHQNLVDQKVSYV 97 (474) T ss_pred ccchHHHHHHHHHHHHHH----HH---HHHHHHHHhcccCccccccchhhhcccccccccccccccchHHHHHHhhhhhh Confidence 000 11111000000 00 0000000000000000 000000012355566778888888 Q ss_pred ccCceEEEecCCceeeeeecchhhhhhcccCcCCCCHHHHHHHHHHHHHhhCCeEEEEeeCCCCceEEEEeeCCcceEEE Q lcl|Aclame:pro 64 SKLPLKIYQEDEYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVY 143 (429) Q Consensus 64 a~~~~~~~~~~~~~~~~~~~~~~~~~l~~~PN~~~s~~~~~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~l~p~~v~~~ 143 (429) -+-|+.+...+++. ...+...+. | ........+..+++.+|.+|.++.++.+|.+ .+..++|..+.++ T Consensus 98 ~g~p~~~~~~~~~~-----~~~l~~~~~---n---~~~~~~~~l~~~~~~~G~~~~~~~~d~~~~~-~i~~~~p~~~~~v 165 (474) T protein:vir:96 98 AGKPVTYAHDDDKV-----LDVIHQVLD---T---RWDNKLIDILTAASNKGIDWLQVYINEDGEL-KLFRVPAEQAIPI 165 (474) T ss_pred cccCceeccCChHH-----HHHHHHHHh---c---cHHHHHHHHHHHHhhCCeEEEEeeeCCCCce-EEEEEcccceEEE Confidence 88887765433211 122222221 2 3456666778899999999999999888865 5777899998888 Q ss_pred EcCCcceeeeeeEEEeecccCc--eEEEccceEEEeecCC---------------------C---------CCcccccCH Q lcl|Aclame:pro 144 IDDVGLLNSKTKMWYVVNTGGQ--QRVLKPEEILHFKNGI---------------------T---------LDGLVGVPT 191 (429) Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~g~--~~~~~~~evih~~~~~---------------------~---------~~~~~G~s~ 191 (429) .++........ ..+.+..++. ...+.+..+.++..-. + .+...|.|- T Consensus 166 ~d~~~~~~~~a-~ir~~~~~~~~~~~vy~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vPvv~~~nn~~~~~d 244 (474) T protein:vir:96 166 WTDKEREQLNA-FIRIFTFNGETKVEYWTAETVTYYVYENGGLIPDFYYGDEHIQTHFSTGSWERVPFIAFKNNPEEVSD 244 (474) T ss_pred EcCCCCCceEE-EEEEEeecCeeEEEEEeCCeEEEEEEcCCceeeccccccccccCcccccCCCccceEEecCCCCCCCc Confidence 76432111111 1111112221 1123333443332110 0 012457788 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHccCCcceEEEeCCCCCHHHHHHHHHHHHHHhcccccccceeecCCCceeEecCCChh Q lcl|Aclame:pro 192 MEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGDLNEDAKKVFRENFESMSSGLQNSHRIALMPVGYQFQPISLNMS 271 (429) Q Consensus 192 ~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~g~~~~~~~~vl~~g~~~~~~~~~~~ 271 (429) ++.....++....+.....+.++..+.|-.+++- .+.+..+.....+ ...+++.++++-+...+..... T Consensus 245 ~e~v~~liDa~d~~~S~~~~~~~~~~~p~lv~~g---~~~~~~~~~~~~~--------~~~~~i~~~~~~~~~~l~~~~~ 313 (474) T protein:vir:96 245 IWMYKSFVDAIDKRLSDVQNMFDESVELIYILRG---YEGEDLSEFMEGL--------KYYKAINVSSDGGVETIQVEVP 313 (474) T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhcchhhhcC---CCcccccchhhhh--------hccceeeccCCCceeEEeccCC Confidence 8888888877776666666666666666555432 2222222222211 1233555665555544444444 Q ss_pred HHHHHHHHHHHHHHHHHHhcCChhhcCCc-cccccccHH----------HHHHHHHHHHHhHHHHHHHHHHHHhhccchh Q lcl|Aclame:pro 272 DAQFLENTELTIRQIATAFGIKMHQLNDL-SKATLNNIE----------QQQQQFYTDTLQATLTMYEQEMTYKLFLDSE 340 (429) Q Consensus 272 d~~~~e~~~~~~~~Ia~~fgvp~~~l~~~-~~~~~~n~~----------~~~~~~~~~~l~P~~~~i~~~l~~~ll~~~~ 340 (429) ...+.+..+.....|+..-++|....... +..++...+ ......+...+..+++.|...+.. .. T Consensus 314 ~~~~~~~~~~l~~~I~~~s~~p~~~~~~~~~n~Sg~Alk~~~~~l~~k~~~~~~~~~~~l~~~~~~i~~~~g~-----~~ 388 (474) T protein:vir:96 314 VASTKEYLDMMRAYIVEFGQGVDFQTDKFGSATSGIALKFLYTNLNLKANKLKNKANVALQELMQFILDFNKI-----KL 388 (474) T ss_pred HHHHHHHHHHHHHHHHHHhCCcCccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-----Cc Confidence 45566778888888999888875443221 111111111 112334444455555544432221 11 Q ss_pred hcchhhhhhhhhhHhhhhHHHHHHHHHHHHhCCCCCHHHHHHHhCCCCCCC--cceeeeccccccccccccccCCCCCCC Q lcl|Aclame:pro 341 LDKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEAG--GDRLLVNGNMLPIDMAGQAYLKGGDTN 418 (429) Q Consensus 341 ~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~Gl~~~~~--gD~~~~~~n~~~~~~~~~~~~~~g~~~ 418 (429) ....+.+.| ..-+..+..+.++.+ ..+|+++...+++++++-..+. .+.+-.-.. ..... .....++..+ T Consensus 389 d~~~i~i~f--~~~~p~~~~e~a~~~---~~~giiS~et~~~~lp~v~D~~~E~eri~~E~~-~~~~~--~~~~~~~~~~ 460 (474) T protein:vir:96 389 DAKEIEITF--NFNVMVNDLEQSQIG---AQSQYLSKETLVRHHPWVDDPKAELERLDEEQL-ELNKQ--LPNLDDGGAD 460 (474) T ss_pred ccceeeEEe--cCCCccCHHHHHHHH---HHcCCCChHHHHHhCCCCCCHHHHHHHHHHHHH-HHHhh--ccccccccCC Confidence 122233444 444566666666654 4579999999999987644321 111100000 00000 0111122222 Q ss_pred CCCCCCCCCCC Q lcl|Aclame:pro 419 GEVSKEGNEGN 429 (429) Q Consensus 419 ~~~~~~~~~~n 429 (429) +..+..+++++ T Consensus 461 ~~~~~~~~~~~ 471 (474) T protein:vir:96 461 GAQQQQQSENN 471 (474) T ss_pred CCCCcCCCCcc Confidence 22222222222 No 191 >protein:vir:95899 Length: 474 # NCBI annotation: ORF006 # Family: family:all:125 # MgeID: mge:1588 # MgeName: 71 # Cross-refs: genbank:acc:YP_240382;genbank:gi:66396046;genbank:GeneID:5133410 Probab=98.44 E-value=6.4e-07 Score=54.53 Aligned_cols=385 Identities=11% Similarity=0.064 Sum_probs=175.1 Q ss_pred Cch----hhhhhcccccccccccccCCchHHHHHhhcCCCCcc-------------eechhhhhccHHHHHHHHHHHHhh Q lcl|Aclame:pro 1 MDS----VKKFFNFEKRQTSQVIELNKDDEKLLEWLGISPSTI-------------SVKGKNALKVATVFACIKILSESV 63 (429) Q Consensus 1 Mg~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~a~~~~~v~~~i~~ia~~i 63 (429) .-+ +.++....... .. ....+.++.-...... ..-+..=+.++.....++..++.+ T Consensus 25 ~~~~~~~i~~~i~~~~~~----~~---~~~~l~~Yy~g~~~i~~~~~~~~~~~~~~~~~~~~ki~~n~~k~Iv~~~~~yl 97 (474) T protein:vir:95 25 VETQEEMIIRLINNHKQK----LK---DINVGQKYYDKDNDINYQAYKQDLHGNIDYTKPDWRITTNFHQNLVDQKVSYV 97 (474) T ss_pred ccchHHHHHHHHHHHHHH----HH---HHHHHHHHhcccCccccccchhhhcccccccccccccccchHHHHHHhhhhhh Confidence 000 11111000000 00 0000000000000000 000000012355566778888888 Q ss_pred ccCceEEEecCCceeeeeecchhhhhhcccCcCCCCHHHHHHHHHHHHHhhCCeEEEEeeCCCCceEEEEeeCCcceEEE Q lcl|Aclame:pro 64 SKLPLKIYQEDEYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVY 143 (429) Q Consensus 64 a~~~~~~~~~~~~~~~~~~~~~~~~~l~~~PN~~~s~~~~~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~l~p~~v~~~ 143 (429) -+-|+.+...+++. ...+...+. | ........+..+++.+|.+|.++.++.+|.+ .+..++|..+.++ T Consensus 98 ~g~p~~~~~~~~~~-----~~~l~~~~~---n---~~~~~~~~l~~~~~~~G~~~~~~~~d~~~~~-~i~~~~p~~~~~v 165 (474) T protein:vir:95 98 AGKPVTYAHDDDKV-----LDVIHQVLD---T---RWDNKLIDILTAASNKGIDWLQVYINEDGEL-KLFRVPAEQAIPI 165 (474) T ss_pred cccCceeccCChHH-----HHHHHHHHh---c---cHHHHHHHHHHHHhhCCeEEEEeeeCCCCce-EEEEEcccceEEE Confidence 88887765433211 122222221 2 3456666778899999999999999888865 5777899998888 Q ss_pred EcCCcceeeeeeEEEeecccCc--eEEEccceEEEeecCC---------------------C---------CCcccccCH Q lcl|Aclame:pro 144 IDDVGLLNSKTKMWYVVNTGGQ--QRVLKPEEILHFKNGI---------------------T---------LDGLVGVPT 191 (429) Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~g~--~~~~~~~evih~~~~~---------------------~---------~~~~~G~s~ 191 (429) .++........ ..+.+..++. ...+.+..+.++..-. + .+...|.|- T Consensus 166 ~d~~~~~~~~a-~ir~~~~~~~~~~~vy~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vPvv~~~nn~~~~~d 244 (474) T protein:vir:95 166 WTDKEREQLNA-FIRIFTFNGETKVEYWTAETVTYYVYENGGLIPDFYYGDEHIQTHFSTGSWERVPFIAFKNNPEEVSD 244 (474) T ss_pred EcCCCCCceEE-EEEEEeecCeeEEEEEeCCeEEEEEEcCCceeeccccccccccCcccccCCCccceEEecCCCCCCCc Confidence 76432111111 1111112221 1123333443332110 0 012457788 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHccCCcceEEEeCCCCCHHHHHHHHHHHHHHhcccccccceeecCCCceeEecCCChh Q lcl|Aclame:pro 192 MEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGDLNEDAKKVFRENFESMSSGLQNSHRIALMPVGYQFQPISLNMS 271 (429) Q Consensus 192 ~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~g~~~~~~~~vl~~g~~~~~~~~~~~ 271 (429) ++.....++....+.....+.++..+.|-.+++- .+.+..+.....+ ...+++.++++-+...+..... T Consensus 245 ~e~v~~liDa~d~~~S~~~~~~~~~~~p~lv~~g---~~~~~~~~~~~~~--------~~~~~i~~~~~~~~~~l~~~~~ 313 (474) T protein:vir:95 245 IWMYKSFVDAIDKRLSDVQNMFDESVELIYILRG---YEGEDLSEFMEGL--------KYYKAINVSSDGGVETIQVEVP 313 (474) T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhcchhhhcC---CCcccccchhhhh--------hccceeeccCCCceeEEeccCC Confidence 8888888877776666666666666666555432 2222222222211 1233555665555544444444 Q ss_pred HHHHHHHHHHHHHHHHHHhcCChhhcCCc-cccccccHH----------HHHHHHHHHHHhHHHHHHHHHHHHhhccchh Q lcl|Aclame:pro 272 DAQFLENTELTIRQIATAFGIKMHQLNDL-SKATLNNIE----------QQQQQFYTDTLQATLTMYEQEMTYKLFLDSE 340 (429) Q Consensus 272 d~~~~e~~~~~~~~Ia~~fgvp~~~l~~~-~~~~~~n~~----------~~~~~~~~~~l~P~~~~i~~~l~~~ll~~~~ 340 (429) ...+.+..+.....|+..-++|....... +..++...+ ......+...+..+++.|...+.. .. T Consensus 314 ~~~~~~~~~~l~~~I~~~s~~p~~~~~~~~~n~Sg~Alk~~~~~l~~k~~~~~~~~~~~l~~~~~~i~~~~g~-----~~ 388 (474) T protein:vir:95 314 VASTKEYLDMMRAYIVEFGQGVDFQTDKFGSATSGIALKFLYTNLNLKANKLKNKANVALQELMQFILDFNKI-----KL 388 (474) T ss_pred HHHHHHHHHHHHHHHHHHhCCcCccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-----Cc Confidence 45566778888888999888875443221 111111111 112334444455555544432221 11 Q ss_pred hcchhhhhhhhhhHhhhhHHHHHHHHHHHHhCCCCCHHHHHHHhCCCCCCC--cceeeeccccccccccccccCCCCCCC Q lcl|Aclame:pro 341 LDKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEAG--GDRLLVNGNMLPIDMAGQAYLKGGDTN 418 (429) Q Consensus 341 ~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~Gl~~~~~--gD~~~~~~n~~~~~~~~~~~~~~g~~~ 418 (429) ....+.+.| ..-+..+..+.++.+ ..+|+++...+++++++-..+. .+.+-.-.. ..... .....++..+ T Consensus 389 d~~~i~i~f--~~~~p~~~~e~a~~~---~~~giiS~et~~~~lp~v~D~~~E~eri~~E~~-~~~~~--~~~~~~~~~~ 460 (474) T protein:vir:95 389 DAKEIEITF--NFNVMVNDLEQSQIG---AQSQYLSKETLVRHHPWVDDPKAELERLDEEQL-ELNKQ--LPNLDDGGAD 460 (474) T ss_pred ccceeeEEe--cCCCccCHHHHHHHH---HHcCCCChHHHHHhCCCCCCHHHHHHHHHHHHH-HHHhh--ccccccccCC Confidence 122233444 444566666666654 4579999999999987644321 111100000 00000 0111122222 Q ss_pred CCCCCCCCCCC Q lcl|Aclame:pro 419 GEVSKEGNEGN 429 (429) Q Consensus 419 ~~~~~~~~~~n 429 (429) +..+..+++++ T Consensus 461 ~~~~~~~~~~~ 471 (474) T protein:vir:95 461 GAQQQQQSENN 471 (474) T ss_pred CCCCcCCCCcc Confidence 22222222222 No 192 >protein:vir:94805 Length: 492 # NCBI annotation: ORF006 # Family: family:all:125 # MgeID: mge:1531 # MgeName: 29 # Cross-refs: genbank:acc:YP_240531;genbank:gi:66396197;genbank:GeneID:5133585 Probab=98.43 E-value=7.1e-07 Score=54.31 Aligned_cols=391 Identities=8% Similarity=0.029 Sum_probs=179.0 Q ss_pred CchhhhhhcccccccccccccCCchHHHHHhh-c------CCCC------cceechhhhhccHHHHHHHHHHHHhhccCc Q lcl|Aclame:pro 1 MDSVKKFFNFEKRQTSQVIELNKDDEKLLEWL-G------ISPS------TISVKGKNALKVATVFACIKILSESVSKLP 67 (429) Q Consensus 1 Mg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~------~~~~------~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~ 67 (429) |-...-+.++..+.... .. ....+.+.. | .... ....-...-+.++....+++..+..+-+-| T Consensus 43 ~~~~~~i~~~i~~~~~~-~~---r~~~l~~YY~g~~~I~~~~~~~~~~~~~~~~~~~~ri~~n~~k~Ivd~~~~yl~G~p 118 (492) T protein:vir:94 43 ETLEEMIVRYIKQHLEK-LP---EISIGQEYYEQRPDIVKEPKPVDATGAVDPLKPDDRMITNFHANLVDQKVSYIVGKP 118 (492) T ss_pred hhHHHHHHHHHHHHHHH-HH---HHHHHHHHhccccccccccccccccccccccccccccccchHHHHHHHHHhhhcccC Confidence 11111111100000000 00 000000000 0 0000 000000011224566677888888887777 Q ss_pred eEEEecCCceeeeeecchhhhhhcccCcCCCCHHHHHHHHHHHHHhhCCeEEEEeeCCCCceEEEEeeCCcceEEEEcCC Q lcl|Aclame:pro 68 LKIYQEDEYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVYIDDV 147 (429) Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~l~~~PN~~~s~~~~~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~l~p~~v~~~~~~~ 147 (429) +.+...+++. ...+...+. | ........+..+.+.+|.+|+++..+.+|.+ .+.+++|..+.++++.. T Consensus 119 ~~~~~~d~~~-----~~~l~~~~~---n---~~~~~~~~~~~~a~~~G~a~~~v~~d~dg~~-~~~~~~p~~~~~v~d~~ 186 (492) T protein:vir:94 119 IAFKHTDDEV-----VKRIDEVLG---N---RFDDKLHSVLTGASNKGIEWLHPYLDEEGEF-KLFRVPAEQGIPIWTDK 186 (492) T ss_pred ceeccCchHH-----HHHHHHHHh---c---cHHHHHHHHHHHHhhCCeEEEEEEecCCCce-EEEEEcccceEEEEcCC Confidence 7764332211 112222221 2 2345566788899999999999999888875 57778999988877643 Q ss_pred ccee-eeeeEEEeecccCceEEEccceEEEeecC---------------------CCC---------CcccccCHHHHHH Q lcl|Aclame:pro 148 GLLN-SKTKMWYVVNTGGQQRVLKPEEILHFKNG---------------------ITL---------DGLVGVPTMEYLK 196 (429) Q Consensus 148 ~~~~-~~~~~~~~~~~~g~~~~~~~~evih~~~~---------------------~~~---------~~~~G~s~~~~~~ 196 (429) .... .....+|..........+.+..|.++... ++. +...|.|-++.+. T Consensus 187 ~~~~~~a~ir~~~~~~~~~~~~y~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~vPvv~~~nn~~~~sd~e~v~ 266 (492) T protein:vir:94 187 EHEELEAFIRMYKLENETKVEYWDKVTVNYYVYENGSLIPDYSNNLENSKTHFSTGSWGKIPFIPFKNNDLEISDIFMYK 266 (492) T ss_pred CCCceEEEEEEEeeccceeEEEEecCeEEEEEEecCeeeeccccccccccccccccCCCccceEEecCCCCCCCchHHHH Confidence 2111 11111221111111122223333322110 000 1235888888888 Q ss_pred HHHHHHHHHHHHHHHHHHccCCcceEEEeCCCCCHHHHHHHHHHHHHHhcccccccceeecCCCceeEecCCChhHHHHH Q lcl|Aclame:pro 197 STLENSASADKFINNFYKQGLQVKGLVQYVGDLNEDAKKVFRENFESMSSGLQNSHRIALMPVGYQFQPISLNMSDAQFL 276 (429) Q Consensus 197 ~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~g~~~~~~~~vl~~g~~~~~~~~~~~d~~~~ 276 (429) ..++....+.....+.++..+.|..+++-- +.++.......+. ..+++.++++.+...+........+. T Consensus 267 ~liDa~d~~~S~~~~~~~~~~~p~lv~~g~---~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~l~~~~~~~~~~ 335 (492) T protein:vir:94 267 TLIDAYNRRLSDLSNTFKDSNELTYVLKNY---DDQELPEFKRLLR--------YYGAIKVSDNGGVDTIQVEVPVENSK 335 (492) T ss_pred HHHHHHHHHHHHHHHHHHHhcCceeeeecC---CcccchhhHHHHh--------hccceecCCCCcceeEeccCCHHHHH Confidence 888888777777777777777776666432 2222222222211 12344455544443333333333455 Q ss_pred HHHHHHHHHHHHHhcCChhhcCCc-cccccccHH----------HHHHHHHHHHHhHHHHHHHHHHHHhhccchhhcchh Q lcl|Aclame:pro 277 ENTELTIRQIATAFGIKMHQLNDL-SKATLNNIE----------QQQQQFYTDTLQATLTMYEQEMTYKLFLDSELDKGF 345 (429) Q Consensus 277 e~~~~~~~~Ia~~fgvp~~~l~~~-~~~~~~n~~----------~~~~~~~~~~l~P~~~~i~~~l~~~ll~~~~~~~~~ 345 (429) ...+...+.|+..-++|..-.... +..++-..+ +.....+...+.-+++.+...+..+ .....+ T Consensus 336 ~~~~~l~~~I~~~s~~p~~~~~~~~~n~Sg~Al~~~~~~l~~k~~~k~~~f~~~l~~~~~li~~~~~~~-----~~~~~i 410 (492) T protein:vir:94 336 KYLDELYQKIMLFGQAVDFSSDKFGSAPSGVALEFLYTNLNLKADKLARKAKVAIQELLWFVFEHFDIK-----GEHKDV 410 (492) T ss_pred HHHHHHHHHHHHHhCCcCCCccccccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-----ccccee Confidence 666777778888877775332211 111111111 1123334444555555554433321 112223 Q ss_pred hhhhhhhhHhhhhHHHHHHHHHHHHhCCCCCHHHHHHHhCCCCCC--Ccceeeecc--ccccccccccccCCCCCCCCCC Q lcl|Aclame:pro 346 YSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEA--GGDRLLVNG--NMLPIDMAGQAYLKGGDTNGEV 421 (429) Q Consensus 346 ~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~Gl~~~~--~gD~~~~~~--n~~~~~~~~~~~~~~g~~~~~~ 421 (429) .+.| ..-+..+..+.++.+.++ .|+++..-++++++.-+.+ ..+....-. ..............++.++.+. T Consensus 411 ~v~f--~~~~p~~~~e~~~~~~kl--~giiS~et~~~~l~~v~d~~~E~eri~~E~~~~~~~~~~~~~~~~~~~~~~~~~ 486 (492) T protein:vir:94 411 DISF--NYNKVANTELQVQTAQQS--MGIVSHETVLENHPFVEDLQAELERIEQEQMEYNKQLPNLDDGGADSAQQQERS 486 (492) T ss_pred eEEe--cCCCCCCHHHHHHHHHHH--hccCchHHHHHhCCCCCCHHHHHHHHHHHHHHHHhhccccccccCCCCccccCC Confidence 4444 455778889999988887 4889988899988764432 121110000 0001111111111222222333 Q ss_pred CCCCCC Q lcl|Aclame:pro 422 SKEGNE 427 (429) Q Consensus 422 ~~~~~~ 427 (429) ++.++| T Consensus 487 ~~~e~e 492 (492) T protein:vir:94 487 NNKESE 492 (492) T ss_pred ccccCC Confidence 333333 No 193 >protein:vir:105292 Length: 478 # NCBI annotation: putative phage portal protein # Family: family:all:125 # MgeID: mge:1679 # MgeName: PH15 # Cross-refs: genbank:acc:YP_950666;genbank:gi:119967836;genbank:GeneID:4643171 Probab=98.41 E-value=7.7e-07 Score=54.10 Aligned_cols=379 Identities=9% Similarity=0.024 Sum_probs=168.6 Q ss_pred Cchhh----------hhhcccccccccccccCCchHHHHHhhcCCCCcceechhhhhccHHHHHHHHHHHHhhccCceEE Q lcl|Aclame:pro 1 MDSVK----------KFFNFEKRQTSQVIELNKDDEKLLEWLGISPSTISVKGKNALKVATVFACIKILSESVSKLPLKI 70 (429) Q Consensus 1 Mg~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~ 70 (429) ..+++ ++......... .. ........ -+......+ ..=+.++....+++..+..+-+-|+.+ T Consensus 32 ~~~i~~~~~~~~~~~~~~~yY~g~~~--i~-~~~~~~~~--~~~~~~~~~---~~ki~~n~~~~ivd~~~~~l~g~~~~~ 103 (478) T protein:vir:10 32 LRLVREHKENIDNITMGERYYNHHPD--IL-DAPPKRDV--NGDYDETKP---DWRMYTNYHQNLVDQKVAYAVANPVTF 103 (478) T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCc--hh-cccccccc--ccccccccc---cceeccchHHHHHHHHHhhhccCCeee Confidence 01111 11100000000 00 00000000 000000000 000123455667788888877777776 Q ss_pred EecCCceeeeeecchhhhhhcccCcCCCCHHHHHHHHHHHHHhhCCeEEEEeeCCCCceEEEEeeCCcceEEEEcCCcce Q lcl|Aclame:pro 71 YQEDEYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVYIDDVGLL 150 (429) Q Consensus 71 ~~~~~~~~~~~~~~~~~~~l~~~PN~~~s~~~~~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~l~p~~v~~~~~~~~~~ 150 (429) ...+++. ...+...++ | ........++.+.+.+|.+|+.+..+..|.+ .+..++|..+.++.+..... T Consensus 104 ~~~~d~~-----~~~l~~~~~---n---~~~~~~~~~~~~~~~~G~~~~~~~~d~~g~~-~~~~~~p~~~~~i~d~~~~~ 171 (478) T protein:vir:10 104 GVDNDKA-----LKQIQHTLN---H---KWDDKLVDILTAASNKGIEWVQPYVDEEGEF-KTFRVPAEQAVPIWTNKERD 171 (478) T ss_pred ecCChHH-----HHHHHHHHh---c---CHHHHHHHHHHHHHhcCeEEEEEEecCCCee-EEEEEcccceEEEEcCCCCC Confidence 4333221 112333332 2 3556667778899999999999988888875 57778999988877643211 Q ss_pred eee-eeEEEeecccCceEEEccce---------------------------------------EEEeecCCCCCcccccC Q lcl|Aclame:pro 151 NSK-TKMWYVVNTGGQQRVLKPEE---------------------------------------ILHFKNGITLDGLVGVP 190 (429) Q Consensus 151 ~~~-~~~~~~~~~~g~~~~~~~~e---------------------------------------vih~~~~~~~~~~~G~s 190 (429) ... ...+|..........+.+.. |++|+ +...|.| T Consensus 172 ~~~~~v~~~~~~~~~~~~~y~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vPvv~~~-----n~~~g~s 246 (478) T protein:vir:10 172 ELQAFIRVYELDGAERVEYWTKDDVTYYELKEGQLIPDFYRSDDHIQPHYYQGNKLMSWGRVPFIPFK-----NNPQEVS 246 (478) T ss_pred ceEEEEEEEEecCceEEEEEeCCeEEEEEEcCCeeeccccccccccccceecccccccCCccceEEec-----cCCCCCC Confidence 111 11111111111111122222 33332 2346888 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHccCCcceEEEeCCCCCHHHHHHHHHHHHHHhcccccccceeec--C--CCceeEec Q lcl|Aclame:pro 191 TMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGDLNEDAKKVFRENFESMSSGLQNSHRIALM--P--VGYQFQPI 266 (429) Q Consensus 191 ~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~g~~~~~~~~vl--~--~g~~~~~~ 266 (429) -+..+...++..........+.++..+.|..+++--.... .......+. ..+++.+ + ++.+|... T Consensus 247 d~~~v~~liDa~~~~~S~~~~~~~~~~~p~~~~~g~~~~~---~~~~~~~~~--------~~~~~~~~~~~~~~~~~l~~ 315 (478) T protein:vir:10 247 DLFMYKTIIDALDKRLSDTQNTFDESVELIYILKGYEGED---MKDFMHNLK--------YYKAISVAGESGSGVDTIKV 315 (478) T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHhhCceeeeecCCccc---cchhhhhhh--------hcceEEecCCCCCcceEEee Confidence 8887777777777666666666666666755554321111 111111111 1122222 2 34455443 Q ss_pred CCChhHHHHHHHHHHHHHHHHHHhcCChhhcCCc-cccccccHH----------HHHHHHHHHHHhHHHHHHHHHHHHhh Q lcl|Aclame:pro 267 SLNMSDAQFLENTELTIRQIATAFGIKMHQLNDL-SKATLNNIE----------QQQQQFYTDTLQATLTMYEQEMTYKL 335 (429) Q Consensus 267 ~~~~~d~~~~e~~~~~~~~Ia~~fgvp~~~l~~~-~~~~~~n~~----------~~~~~~~~~~l~P~~~~i~~~l~~~l 335 (429) .. ....+.+..+...+.|...-++|..-.... +..++...+ ......+..++.-+++.|...+. T Consensus 316 ~~--~~~~~~~~~~~l~~~i~~~s~~p~~~~~~~~~n~Sg~Al~~~~~~l~~k~~~~~~~~~~~l~~~~~li~~~~g--- 390 (478) T protein:vir:10 316 EV--PIDSVKEYTKMLRDYIIEFGQGVDFQQDKFGNSPSGIALKFMYSNLDLKANKLKNKTLTALQELLQYIIDFYR--- 390 (478) T ss_pred cC--ChHHHHHHHHHHHHHHHHHhCccccCccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC--- Confidence 33 334456777777888888888875443221 111111111 11223333334444444333221 Q ss_pred ccchhhcchhhhhhhhhhHhhhhHHHHHHHHHHHHhCCCCCHHHHHHHhCCCCCCC--cceeeeccccccccccccc-cC Q lcl|Aclame:pro 336 FLDSELDKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEAG--GDRLLVNGNMLPIDMAGQA-YL 412 (429) Q Consensus 336 l~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~Gl~~~~~--gD~~~~~~n~~~~~~~~~~-~~ 412 (429) .........+.| ..-+..|..+.++.+.++ +|+++...+++++++-..+. .+.+..- +.......... .. T Consensus 391 --~~~~~~~i~i~f--~~~~p~d~~e~a~~~~kl--~g~iS~et~~~~l~~v~D~~~E~~ri~~E-~~~~~~~~~~~~~~ 463 (478) T protein:vir:10 391 --LDVKVQDIEITF--NFNVMVNELENSQIAMNS--TGLLSKETILSNHAWVEDPVAEMERIEQE-NIELNQQLPDIEEG 463 (478) T ss_pred --CCcccccceEEe--cCCCCCCHHHHHHHHHHH--hCCCChHHHHHhCCCCCCHHHHHHHHHHH-HHHHHhhccccccc Confidence 111112234444 444667888888888877 78899988999998744321 1111100 00000000000 00 Q ss_pred CCCCCCCCCCCCCCC Q lcl|Aclame:pro 413 KGGDTNGEVSKEGNE 427 (429) Q Consensus 413 ~~g~~~~~~~~~~~~ 427 (429) ..++.+.+.+++..| T Consensus 464 ~~~~~~~~~~~~~~~ 478 (478) T protein:vir:10 464 LNGEQQRQSENNQPE 478 (478) T ss_pred cCCCCCCCCCCCCCC Confidence 111111111111111 No 194 >protein:vir:78083 Length: 537 # NCBI annotation: gp3 # Family: family:all:125 # MgeID: mge:1844 # MgeName: P35 # Cross-refs: genbank:acc:YP_001468787;genbank:gi:157325368;genbank:GeneID:5601845 Probab=98.41 E-value=7.8e-07 Score=54.06 Aligned_cols=402 Identities=11% Similarity=0.067 Sum_probs=177.3 Q ss_pred Cch------hhhhhccc----cccccc-ccccCCchHHHHH----hhcCCCC--cceechhhhhccHHHHHHHHHHHHhh Q lcl|Aclame:pro 1 MDS------VKKFFNFE----KRQTSQ-VIELNKDDEKLLE----WLGISPS--TISVKGKNALKVATVFACIKILSESV 63 (429) Q Consensus 1 Mg~------~~~~~~~~----~~~~~~-~~~~~~~~~~~~~----~~~~~~~--~~~~~~~~a~~~~~v~~~i~~ia~~i 63 (429) |-+ |...+... ++..-. ..........+.. +.+.... .....+..=+.+....-.++..+..+ T Consensus 8 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~YY~g~h~Il~r~~~~~~~~~~~~~d~~~~nnki~~nf~k~Ivd~~~~yl 87 (537) T protein:vir:78 8 KPIDQLGGLLNTEITTYMASNHIKWAHIGENYYNQENDIEKSRIFYMNDKGQLREDNYASNVKISHGFFTELVDQLAQYL 87 (537) T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhhhcccccccccccccccccccccccccchHHHHHHHHhhhh Confidence 222 11111000 000000 0000000000000 0000000 00000000012334455677777777 Q ss_pred ccCceEEEecCCceeeeeecchhhhhhcccCcCCCCHHHHHHHHHHHHHhhCCeEEEEeeCCCCceEEEEeeCCcceEEE Q lcl|Aclame:pro 64 SKLPLKIYQEDEYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVY 143 (429) Q Consensus 64 a~~~~~~~~~~~~~~~~~~~~~~~~~l~~~PN~~~s~~~~~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~l~p~~v~~~ 143 (429) -+-|+.+...+++. ..+...|+.- +. .........+..++..+|.+|.++..+.+|.+ .+..++|..+-++ T Consensus 88 ~G~Pv~~~~~d~~~------~e~~~~l~~~-~~-~~~~~~~~el~~~~s~~G~ay~~~y~de~~~~-~~~~i~p~~~~pv 158 (537) T protein:vir:78 88 LSNGVEVKVKDEDN------TQLDEILQEY-FD-EDFQATIDTLVTNASKKGFEGIFARTTSEGKL-KFQTVDGLTLIPV 158 (537) T ss_pred cccCceeecCcchh------HHHHHHHHHH-hh-ccHHHHHHHHHHHHhhcCeeEEEeeecCCCce-EEEEEccceeEEE Confidence 78888775433221 1233334321 11 23344566778889999999999999988865 4677888888777 Q ss_pred EcCCcceeeeeeEEEeecc-----cCc----eEEEccceEEEeecC---------------------------------- Q lcl|Aclame:pro 144 IDDVGLLNSKTKMWYVVNT-----GGQ----QRVLKPEEILHFKNG---------------------------------- 180 (429) Q Consensus 144 ~~~~~~~~~~~~~~~~~~~-----~g~----~~~~~~~evih~~~~---------------------------------- 180 (429) .++......-...|+.... ++. ...++++.|.+++.. T Consensus 159 ~d~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~evyt~~~i~~y~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 238 (537) T protein:vir:78 159 FDDYGVLKMIIRWYSEIRYSTKQQSTETIWHADVWNEEAVCYYIQDDEGVSTTYKLDEAYNPNPAPHVLAIEESTDADFE 238 (537) T ss_pred EcCCCCceeEEEEEeeeeccccccCcceEEEEEEEcCCcEEEEEecCCcccccccccccccccccceeeecccccccccc Confidence 7654332221111111100 000 112334444443210 Q ss_pred ---------CC---------CCcccccCHHHHHHHHHHHHHHHHHHHHHHHHccCCcceEEEeCCCCCHHHHHHHHHHHH Q lcl|Aclame:pro 181 ---------IT---------LDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGDLNEDAKKVFRENFE 242 (429) Q Consensus 181 ---------~~---------~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~~e~~~~~~~~~~ 242 (429) ++ .+...|.|-++.....++....+....++.+...+.|-.++.--...... ..++.+. T Consensus 239 ~~~~~~~~~~~~g~iPvv~f~nn~~~~sd~e~v~~LiDayd~~~S~~an~~~~~~~~ilvi~g~~~~~~~---~~~~~l~ 315 (537) T protein:vir:78 239 DTDGYQVLGRSYSKFPFQLLYNNKDGMSDVKRVKSIIDDYDVMNCFLSNNLQDFSEAIYVVKGFSGDSTD---KLRQNIK 315 (537) T ss_pred ccccccccccCCcceeEEEeccCccCCCchhhhHHHHHHHHHHHHhhhhHHHHhcCceeeeecCCCccch---hHHHHHh Confidence 00 01235788888888888888888877777777766665555432211111 1222221 Q ss_pred HHhcccccccceeecC--CCceeEecCCChhHHHHHHHHHHHHHHHHHHhcCChhhcCCcccccccc----------HHH Q lcl|Aclame:pro 243 SMSSGLQNSHRIALMP--VGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKATLNN----------IEQ 310 (429) Q Consensus 243 ~~~~g~~~~~~~~vl~--~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~fgvp~~~l~~~~~~~~~n----------~~~ 310 (429) . .+.+.+-+ ++++|.....+ +.......+...+.|...-.+|-.--...+..++.. ... T Consensus 316 ~-------~~~i~v~~d~~~v~~l~~~~~--~~~~e~~ld~L~~~I~~~s~~~~~~~~~~gn~SGvAlk~~~~~l~~ka~ 386 (537) T protein:vir:78 316 A-------KKMIGVNGDNAGMEIQTVSIP--YEARKAKMDIDVENIYRSGMGFNSTAVGDGNVTNVVIKSRYTLLAMKAR 386 (537) T ss_pred h-------cCceeecCCCCceeEEEecCC--HHHHHHHHHHHHHHHHHhcCCCCCccccccCCcHHHHHHHHhhHHHHHH Confidence 1 12223332 33555554443 222334444555555544333321111111111111 112 Q ss_pred HHHHHHHHHHhHHHHHHHHHHHHhhccchhhcchhhhhhhhhhHhhhhHHHHHHHHHHHHhCCCCCHHHHHHHhCCCCCC Q lcl|Aclame:pro 311 QQQQFYTDTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEA 390 (429) Q Consensus 311 ~~~~~~~~~l~P~~~~i~~~l~~~ll~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~Gl~~~~ 390 (429) .....++..+.-+++.|..-++.+-.... ... .+.+.+..-+..|..+.++.+.++..+|+++..-+.+.+++-..+ T Consensus 387 ~ke~~f~~~l~~~~~~i~~~~~~~~~~~~-d~~--~i~i~f~~~~P~n~~e~a~~~~~l~~~giiS~eT~l~~~p~vdd~ 463 (537) T protein:vir:78 387 KMETSLRKVLRWCADMVVSDIALRGLGEY-DSN--DICFEIEPHVLANELDIATTRKTEAETEALKIGNIMTVAPRIGDD 463 (537) T ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCccc-ccc--eeeEEeccCCCCCHHHHHHHHHHHHhcCcchHHHHHHhCCCCCCH Confidence 33445566666666666665543311111 112 344444555788999999999999999999988888877653221 Q ss_pred C--------------------cceeeeccccccccccccccCCC-----CCCCCCCCCCCCCCC Q lcl|Aclame:pro 391 G--------------------GDRLLVNGNMLPIDMAGQAYLKG-----GDTNGEVSKEGNEGN 429 (429) Q Consensus 391 ~--------------------gD~~~~~~n~~~~~~~~~~~~~~-----g~~~~~~~~~~~~~n 429 (429) . .+.-.......|- .++...| ..+.+++.+.++|.| T Consensus 464 e~ek~~~ee~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~d~~~~~~~~~ 524 (537) T protein:vir:78 464 ETLKLIAEELDLDYNELKDALAEQDAQSLDVSPD---VQAMLDGLPVNANQPPVDPNQPVADPN 524 (537) T ss_pred HHHHHHHHHHHhhhhhhhhhhhhhcccccCcCcc---hhhhcCCCCCCCCCCCCCccCCCCCCC Confidence 0 0000000000010 0010111 111122333333333 No 195 >protein:vir:93747 Length: 472 # NCBI annotation: ORF006 # Family: family:all:125 # MgeID: mge:1475 # MgeName: 55 # Cross-refs: genbank:acc:YP_240454;genbank:gi:66396119;genbank:GeneID:5133516 Probab=98.41 E-value=7.9e-07 Score=54.03 Aligned_cols=386 Identities=9% Similarity=0.051 Sum_probs=178.9 Q ss_pred Cchhhhhhc-ccccccccccccCCchHHHHHhh-c------CCCC------cceechhhhhccHHHHHHHHHHHHhhccC Q lcl|Aclame:pro 1 MDSVKKFFN-FEKRQTSQVIELNKDDEKLLEWL-G------ISPS------TISVKGKNALKVATVFACIKILSESVSKL 66 (429) Q Consensus 1 Mg~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~------~~~~------~~~~~~~~a~~~~~v~~~i~~ia~~ia~~ 66 (429) +-+..++.. +....+.. .. ....+.... | .... ....-...=+..+....+|+..+..+-+- T Consensus 22 ~~~~~~~i~~~i~~~~~~-~~---~~~~~~~YY~g~~~i~~~~~~~~~~~~~~~~~~~~ri~~n~~~~ivd~~~~~l~g~ 97 (472) T protein:vir:93 22 PETLEEMIVRYIKQHLEK-LP---EISIGQEYYEQRPDIVKEPKPVDATGAVDPLKPDDRMITNFHANLVDQKVSYIVGK 97 (472) T ss_pred hhhHHHHHHHHHHHHHHH-HH---HHHHHHHHhccccccccccchhhccccccccccccccccchHHHHHHHHhhhhccc Confidence 111111111 00000000 00 000000000 0 0000 00000000012466677788888888777 Q ss_pred ceEEEecCCceeeeeecchhhhhhcccCcCCCCHHHHHHHHHHHHHhhCCeEEEEeeCCCCceEEEEeeCCcceEEEEcC Q lcl|Aclame:pro 67 PLKIYQEDEYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVYIDD 146 (429) Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~l~~~PN~~~s~~~~~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~l~p~~v~~~~~~ 146 (429) |+.+...+++. ...+...+. | ........+..+.+.+|.||+++..+.+|.+ .+-+++|..+.++.+. T Consensus 98 ~~~~~~~d~~~-----~~~l~~~~~---n---~~~~~~~~~~~~~~~~G~~~~~v~~d~d~~~-~i~~~~p~~~~~i~d~ 165 (472) T protein:vir:93 98 PIAFKHTDDEV-----VKRIDEVLG---N---RFDDKLHSVLTGASNKGIEWLHPYLDEEGEF-KLFRVPAEQGIPIWTD 165 (472) T ss_pred CeeeccCChHH-----HHHHHHHHh---c---cHHHHHHHHHHHHhhcCeEEEEEEECCCCce-EEEEEcccceEEEEcC Confidence 77664332211 112222221 2 2345556678889999999999999888875 5777899998888764 Q ss_pred Ccceee-eeeEEEeecccCceEEEccce-----------------------------------EEEeecCCCCCcccccC Q lcl|Aclame:pro 147 VGLLNS-KTKMWYVVNTGGQQRVLKPEE-----------------------------------ILHFKNGITLDGLVGVP 190 (429) Q Consensus 147 ~~~~~~-~~~~~~~~~~~g~~~~~~~~e-----------------------------------vih~~~~~~~~~~~G~s 190 (429) ...... ....+|..........+.+.. |++|++ ...|.| T Consensus 166 ~~~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vPvv~~~n-----n~~g~s 240 (472) T protein:vir:93 166 KEHEELEAFIRMYKLENETKVEYWDKVTVNYYVYENGSLIPDYSNNLENSKTHFSTGSWGKIPFIPFKN-----NDLEIS 240 (472) T ss_pred CCCCceEEEEEEEEeecceeEEEEecCeEEEEEEecCeeeecccccccccccccccCCCCCcceEEecC-----CCCCCC Confidence 321111 111111111111111122222 233321 246888 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHccCCcceEEEeCCCCCHHHHHHHHHHHHHHhcccccccceeecCCCceeEecCCCh Q lcl|Aclame:pro 191 TMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGDLNEDAKKVFRENFESMSSGLQNSHRIALMPVGYQFQPISLNM 270 (429) Q Consensus 191 ~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~g~~~~~~~~vl~~g~~~~~~~~~~ 270 (429) -++.+...++....+.....+.++..+.|..+++--. .++.......+. ..+++.++++-+...+.... T Consensus 241 ~~e~v~~liDa~~~~~s~~~~~~~~~~~~~~~~~g~~---~~~~~~~~~~~~--------~~~~~~~~~~~~~~~l~~~~ 309 (472) T protein:vir:93 241 DIFMYKTLIDAYNRRLSDLSNTFKDSNELTYVLTNYD---DQELPEFKRLLR--------YYGAIKVSDNGGVDTIQVEV 309 (472) T ss_pred chhhhHHHHHHHHHHHHHHHHHHHHhcCceeEeecCC---cccchhhHHHHh--------hccccccCCCCcceeEeecC Confidence 8888888888777776666777777777766665322 222222222111 12244445544444444344 Q ss_pred hHHHHHHHHHHHHHHHHHHhcCChhhcCCcc-ccccccHH----------HHHHHHHHHHHhHHHHHHHHHHHHhhccch Q lcl|Aclame:pro 271 SDAQFLENTELTIRQIATAFGIKMHQLNDLS-KATLNNIE----------QQQQQFYTDTLQATLTMYEQEMTYKLFLDS 339 (429) Q Consensus 271 ~d~~~~e~~~~~~~~Ia~~fgvp~~~l~~~~-~~~~~n~~----------~~~~~~~~~~l~P~~~~i~~~l~~~ll~~~ 339 (429) ....+....+...+.|+..-++|........ ..++...+ +.....+...+.-+++.+...++. . T Consensus 310 ~~~~~~~~~~~l~~~i~~~s~~p~~~~~~~~~n~Sg~Al~~~~~~l~~ka~~~~~~~~~~l~~~~~li~~~~~~-----~ 384 (472) T protein:vir:93 310 PVENSKKYLDELYQKIMLFGQAVDFSSDKFGSAPSGVALEFLYTNLNLKADKLARKAKVAIQELLWFVFEHFDI-----K 384 (472) T ss_pred CHHHHHHHHHHHHHHHHHHhCCCCCCccccccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-----C Confidence 4555677788888899999888865443221 11111111 112233444444555554443322 1 Q ss_pred hhcchhhhhhhhhhHhhhhHHHHHHHHHHHHhCCCCCHHHHHHHhCCCCCC--Ccceeeecc--ccccccccccccCCCC Q lcl|Aclame:pro 340 ELDKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEA--GGDRLLVNG--NMLPIDMAGQAYLKGG 415 (429) Q Consensus 340 ~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~Gl~~~~--~gD~~~~~~--n~~~~~~~~~~~~~~g 415 (429) .....+.+.| ..-...+..+.++.+.++ +|+++..-+.+++++-+.+ ..+....-. ..............++ T Consensus 385 ~~~~~i~v~f--~~~~p~~~~~~~~~~~k~--~giis~et~l~~l~~~~d~~~E~~ri~~E~~~~~~~~~~~~~~~~d~~ 460 (472) T protein:vir:93 385 GEHKDVDISF--NYNKVANTELQVQTAQQS--MGIVSHETVLENHPFVEDLQAELERIEQEQMEYNKQLPNLDDGGADGA 460 (472) T ss_pred cccceeeEEe--CCCCCCCHHHHHHHHHHH--hccCchHHHHHhCCCCCCHHHHHHHHHHHHHHHHHhccCcCcccCCCC Confidence 1122334444 455677888888888887 5889988888888764322 111110000 0000111111111122 Q ss_pred CCCCCCCCCCCC Q lcl|Aclame:pro 416 DTNGEVSKEGNE 427 (429) Q Consensus 416 ~~~~~~~~~~~~ 427 (429) .++.+++++.+| T Consensus 461 ~~~~~~~~~~~e 472 (472) T protein:vir:93 461 QQQERSNNKESE 472 (472) T ss_pred CCCCCCCcccCC Confidence 222222222223 No 196 >protein:vir:1236 Length: 483 # NCBI annotation: similar to phage Spp1 gp6 (portal protein) # Family: family:all:125 # MgeID: mge:25 # MgeName: phi ETA # Cross-refs: genbank:acc:NP_510935;genbank:gi:17426269;genbank:GeneID:927380 Probab=98.39 E-value=8.6e-07 Score=53.83 Aligned_cols=388 Identities=9% Similarity=0.036 Sum_probs=178.5 Q ss_pred CchhhhhhcccccccccccccCCchHHHHHhh-cC------CCC---cceec---hhhhhccHHHHHHHHHHHHhhccCc Q lcl|Aclame:pro 1 MDSVKKFFNFEKRQTSQVIELNKDDEKLLEWL-GI------SPS---TISVK---GKNALKVATVFACIKILSESVSKLP 67 (429) Q Consensus 1 Mg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~------~~~---~~~~~---~~~a~~~~~v~~~i~~ia~~ia~~~ 67 (429) +-+.+.+..+..+.... .. ....+.+.. |. ... ..... +..=+..+....+|+..++.+-+-| T Consensus 34 e~~~~~i~~~i~~~~~~-~~---r~~~l~~YY~g~~~i~~~~~~~~~~~~~~~~~~~~ki~~n~~k~Ivd~~~~~l~G~p 109 (483) T protein:vir:12 34 ETLEEMIVRYIKQHLEK-LP---EISIGQEYYEQRPDIVKEPKPVDATGAVDPLKPDDRMITNFHANLVDQKVSYIVGKP 109 (483) T ss_pred hhHHHHHHHHHHHHHHH-HH---HHHHHHHHhccccccccccccccccccccccccccccccchHHHHHHHHhhhhcccC Confidence 11111110000000000 00 000000000 00 000 00000 0001224566667888888877777 Q ss_pred eEEEecCCceeeeeecchhhhhhcccCcCCCCHHHHHHHHHHHHHhhCCeEEEEeeCCCCceEEEEeeCCcceEEEEcCC Q lcl|Aclame:pro 68 LKIYQEDEYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVYIDDV 147 (429) Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~l~~~PN~~~s~~~~~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~l~p~~v~~~~~~~ 147 (429) +.+...+++. ...+...+ . | ........+..+.+.+|.+|+++..+.+|.+ .+..++|..+.++.+.. T Consensus 110 ~~~~~~d~~~-----~~~l~~~~-~--n---~~~~~~~~~~~~~~~~G~~y~~v~~d~d~~~-~i~~~~p~~~~~v~d~~ 177 (483) T protein:vir:12 110 IAFKHTDDEV-----VKRIDEVL-G--N---RFDDKLHSVLTGASNKGIEWLHPYLDEEGEF-KLFRVPAEQGIPIWTDK 177 (483) T ss_pred ceeccCChHH-----HHHHHHHH-h--c---cHHHHHHHHHHHHhhCCeEEEEEEEcCCCce-EEEEEcccceEEEEcCC Confidence 7764332211 11222222 1 2 2344556677888999999999999888875 58889999998887643 Q ss_pred ccee-eeeeEEEeecccCceEEEccceEEEeecC---------------------CCC---------CcccccCHHHHHH Q lcl|Aclame:pro 148 GLLN-SKTKMWYVVNTGGQQRVLKPEEILHFKNG---------------------ITL---------DGLVGVPTMEYLK 196 (429) Q Consensus 148 ~~~~-~~~~~~~~~~~~g~~~~~~~~evih~~~~---------------------~~~---------~~~~G~s~~~~~~ 196 (429) .... .....+|..........+.+..+.|+... ++. +...|.|-++.+. T Consensus 178 ~~~~~~~~ir~~~~~~~~~~~~y~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~vPvv~~~nn~~g~sd~e~v~ 257 (483) T protein:vir:12 178 EHEELEAFIRMYKLENETKVEYWDKVTVNYYVYENGSLIPDYSNNLENSKTHFSTGSWGKIPFIPFKNNDLEISDIFMYK 257 (483) T ss_pred CCCceEEEEEEEEeecceEEEEEecCeEEEEEEeCCeeeecccccccccccccccCCCCccceEEecCCCCCCCchhhHH Confidence 2111 11111111111111122233333332100 000 1245788888888 Q ss_pred HHHHHHHHHHHHHHHHHHccCCcceEEEeCCCCCHHHHHHHHHHHHHHhcccccccceeecCCCceeEecCCChhHHHHH Q lcl|Aclame:pro 197 STLENSASADKFINNFYKQGLQVKGLVQYVGDLNEDAKKVFRENFESMSSGLQNSHRIALMPVGYQFQPISLNMSDAQFL 276 (429) Q Consensus 197 ~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~g~~~~~~~~vl~~g~~~~~~~~~~~d~~~~ 276 (429) ..++....+.....+.++..+.|..+++--. .+..+.....+. ..+++.++++.+...+.....+..+. T Consensus 258 ~liDa~d~~~S~~~~~~~~~~~~~lv~~g~~---~~~~~~~~~~~~--------~~~~~~~~~~~~~~~l~~~~~~~~~~ 326 (483) T protein:vir:12 258 TLIDAYNRRLSDLSNTFKDSNELTYVLTNYD---DQELPEFKRLLR--------YYGAIKVSDNGGVDTIQVEVPVENSK 326 (483) T ss_pred HHHHHHHHHHHHHHHHHHHhcCceeeeecCC---cccchhHHHhhh--------hccccccCCCCcceEEeecCCHHHHH Confidence 8888777766666666677777766665322 222222222111 12234444444444444333444566 Q ss_pred HHHHHHHHHHHHHhcCChhhcCCc-cccccccH----------HHHHHHHHHHHHhHHHHHHHHHHHHhhccchhhcchh Q lcl|Aclame:pro 277 ENTELTIRQIATAFGIKMHQLNDL-SKATLNNI----------EQQQQQFYTDTLQATLTMYEQEMTYKLFLDSELDKGF 345 (429) Q Consensus 277 e~~~~~~~~Ia~~fgvp~~~l~~~-~~~~~~n~----------~~~~~~~~~~~l~P~~~~i~~~l~~~ll~~~~~~~~~ 345 (429) ...+...+.|+..-++|....... +..++... .+.....+...+..+++.|...+.. ....... T Consensus 327 ~~~~~l~~~I~~~s~~p~~~~~~~~~n~Sg~Al~~~~~~l~~k~~~~~~~f~~~l~~~~~li~~~~~~-----~~~~~~i 401 (483) T protein:vir:12 327 KYLDELYQKIMLFGQAVDFSSDKFGSAPSGVALEFLYTNLNLKADKLARKAKVAIQELLWFVFEHFDI-----KGEHKDV 401 (483) T ss_pred HHHHHHHHHHHHHhCCCCCCccccccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-----CCcccee Confidence 777888888888888876443221 11111111 1122344455555555555544332 1122233 Q ss_pred hhhhhhhhHhhhhHHHHHHHHHHHHhCCCCCHHHHHHHhCCCCCC--Ccceeee-----ccccccccccccccCCCCCCC Q lcl|Aclame:pro 346 YSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEA--GGDRLLV-----NGNMLPIDMAGQAYLKGGDTN 418 (429) Q Consensus 346 ~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~Gl~~~~--~gD~~~~-----~~n~~~~~~~~~~~~~~g~~~ 418 (429) .+.| ..-+..|..+.++.+.++ +|+++..-++++++.-+.+ ..+.... .....+... ....+...+ T Consensus 402 ~v~f--~~~~p~~~~~~a~~~~kl--~GiiS~et~~~~~~~v~d~~~E~~ri~~E~~~~~~~~~~~~~---~~~d~~~~~ 474 (483) T protein:vir:12 402 DISF--NYNKVANTELQVQTAQQS--MGIVSHETVLENHPFVEDLQAELERIEQEQMEYNKQLPNLDD---GGADGAQQQ 474 (483) T ss_pred eEEe--CCCCCCCHHHHHHHHHHH--hccCchHHHHHhCCCCCCHHHHHHHHHHHHHHHHhhcccccc---cccCCcccC Confidence 4444 555778899999988887 5899998899988764332 1111100 000001110 000011111 Q ss_pred CCCCCCCCC Q lcl|Aclame:pro 419 GEVSKEGNE 427 (429) Q Consensus 419 ~~~~~~~~~ 427 (429) ++.+++..| T Consensus 475 ~~~~~~e~e 483 (483) T protein:vir:12 475 ERSNNKESE 483 (483) T ss_pred CCCCcccCC Confidence 112222222 No 197 >protein:vir:95113 Length: 474 # NCBI annotation: ORF007 # Family: family:all:125 # MgeID: mge:1549 # MgeName: X2 # Cross-refs: genbank:acc:YP_240817;genbank:gi:66394677;genbank:GeneID:5133907 Probab=98.39 E-value=8.7e-07 Score=53.81 Aligned_cols=394 Identities=10% Similarity=0.030 Sum_probs=174.2 Q ss_pred Cchhhhhhccccccccccc---ccCCchHHHHHhhcCCCCcceec---hhhhhccHHHHHHHHHHHHhhccCceEEEecC Q lcl|Aclame:pro 1 MDSVKKFFNFEKRQTSQVI---ELNKDDEKLLEWLGISPSTISVK---GKNALKVATVFACIKILSESVSKLPLKIYQED 74 (429) Q Consensus 1 Mg~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~---~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~ 74 (429) =.++.++.+.......... ........+..-........... +..-+.++....+++..++.+-+-|+.+...+ T Consensus 29 ~~~i~~~i~~~~~~~~~~~~~~~Yy~g~~~i~~r~~~~~~~~~~~~~~~~~ki~~n~~~~Ivd~~~~~l~g~p~~~~~~d 108 (474) T protein:vir:95 29 EEMIIRLIDDHRKQLDKITVGQRYYDKDNDIVKQMKKVDVYGNIDYDKPDWRITTNFHQNLVDQKVSYVASKPVTYSCED 108 (474) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcccCchhccccccccccccccccccceeccchHHHHHHHHHhhhccCCceeccCc Confidence 0111111110000000000 00000000000000000000000 00011245556678888888878887764332 Q ss_pred CceeeeeecchhhhhhcccCcCCCCHHHHHHHHHHHHHhhCCeEEEEeeCCCCceEEEEeeCCcceEEEEcCCccee-ee Q lcl|Aclame:pro 75 EYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVYIDDVGLLN-SK 153 (429) Q Consensus 75 ~~~~~~~~~~~~~~~l~~~PN~~~s~~~~~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~l~p~~v~~~~~~~~~~~-~~ 153 (429) ++. ...+...+ . | ........+....+.+|.+|+++..+..|++ .+..++|..+-++.++..... .. T Consensus 109 ~~~-----~~~l~~~~-~--n---~~~~~~~e~~~~~~~~G~~~~~v~~d~~~~~-~i~~~~p~~~~~v~d~~~~~~~~~ 176 (474) T protein:vir:95 109 ESV-----LKIIHDVL-D--T---RWDNKLIDILTATSNKGIDWLQVYINENGEM-KLFRVPAEQAIPIWVDKEREELKS 176 (474) T ss_pred hHH-----HHHHHHHH-h--c---cHHHHHHHHHHHHhhcCcEEEEEEecCCCce-EEEEEcccceEEEEcCCCCCceEE Confidence 211 11222222 1 2 2445566778889999999999988888875 577788888887776532111 11 Q ss_pred eeEEEeecccCceEEEccceEEEeecC---------------------CC---------CCcccccCHHHHHHHHHHHHH Q lcl|Aclame:pro 154 TKMWYVVNTGGQQRVLKPEEILHFKNG---------------------IT---------LDGLVGVPTMEYLKSTLENSA 203 (429) Q Consensus 154 ~~~~~~~~~~g~~~~~~~~evih~~~~---------------------~~---------~~~~~G~s~~~~~~~~i~~~~ 203 (429) ...+|..........+.+..+.+++.. ++ .+...|.|-++.+...++... T Consensus 177 ~i~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iPvv~~~nn~~g~sd~e~v~~liDa~d 256 (474) T protein:vir:95 177 FIRYYKFNNEEKVEFWTDTTVTYYVLENGGLIPDYYYGANHIQSHFSNGNWGRVPFIAFKNNPEEVSDIWMYKSLIDAID 256 (474) T ss_pred EEEEEEEcCeeEEEEEeCCeEEEEEEcCCccccccccCcccccccccccCCCccceEeecCCCCCCCcHHHHHHHHHHHH Confidence 111111111111222333333332210 00 012458888888888888777 Q ss_pred HHHHHHHHHHHccCCcceEEEeCCCCCHHHHHHHHHHHHHHhcccccccceeecCCCceeEecCCChhHHHHHHHHHHHH Q lcl|Aclame:pro 204 SADKFINNFYKQGLQVKGLVQYVGDLNEDAKKVFRENFESMSSGLQNSHRIALMPVGYQFQPISLNMSDAQFLENTELTI 283 (429) Q Consensus 204 ~~~~~~~~~~~ng~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~g~~~~~~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~ 283 (429) .+.....+.++..+.|-.++.--.....+ .... .. ...+++.++++-+...+........+.+..+... T Consensus 257 ~~~S~~~~~~~~~~~p~lv~~g~~~~~~~---~~~~----~~----~~~~~i~~~~~~~~~~l~~~~~~~~~~~~~~~l~ 325 (474) T protein:vir:95 257 KRLSDAQNMFDESVELIYILKGYEGQDLE---EFMR----GL----KYYKAINVDGDGGVETIQVEVPVSSTKEYIDLMR 325 (474) T ss_pred HHHHHHHHHHHHhcCceeeeecCCcccch---hhhh----hh----hccceeeccCCCceeEEeecCCHHHHHHHHHHHH Confidence 66666666667777776555432211111 1111 11 1234555666655555544444555677888889 Q ss_pred HHHHHHhcCChhhcCCc-cccccccH----------HHHHHHHHHHHHhHHHHHHHHHHHHhhccchhhcchhhhhhhhh Q lcl|Aclame:pro 284 RQIATAFGIKMHQLNDL-SKATLNNI----------EQQQQQFYTDTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVD 352 (429) Q Consensus 284 ~~Ia~~fgvp~~~l~~~-~~~~~~n~----------~~~~~~~~~~~l~P~~~~i~~~l~~~ll~~~~~~~~~~~~fd~~ 352 (429) +.|+..-++|....... +..++... .+.....+...+..+++.|...+.. ........+.|+. T Consensus 326 ~~i~~~s~~p~~~~~~~~~n~Sg~Alk~~~~~l~~k~~~k~~~~~~~l~~~~~li~~~~g~-----~~d~~~i~v~f~~- 399 (474) T protein:vir:95 326 AYIMEFGQGVDFQTDKFGSAPSGIALKFLYGNLDLKANKLKNKATVAIQELIGFIIDFNNL-----KMDVKDIEISFNF- 399 (474) T ss_pred HHHHHHhCCcccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-----CcccceeeEEecc- Confidence 99999999886332211 11111111 1122344455555555555543321 1122334455543 Q ss_pred hHhhhhHHHHHHHHHHHHhCCCCCHHHHHHHhCCCCCCC--cceeeecc-c-cccccccccccCCCCCCCCCCCCCCCC Q lcl|Aclame:pro 353 AILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEAG--GDRLLVNG-N-MLPIDMAGQAYLKGGDTNGEVSKEGNE 427 (429) Q Consensus 353 ~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~Gl~~~~~--gD~~~~~~-n-~~~~~~~~~~~~~~g~~~~~~~~~~~~ 427 (429) -...|..+.++. +.++|+++...+.+++++-+.+. ...+..-. . .............+.+...++..+..| T Consensus 400 -~~p~d~~e~a~~---~~~~g~iS~et~i~~l~~v~d~~~E~~ri~~E~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 474 (474) T protein:vir:95 400 -NRMMNDAEQSQI---IAQSQYLSRETLVKSSPLVDDYKAELERIEQEQMEYNKQLPNLDDGGADGAQQQERSNDKESE 474 (474) T ss_pred -CCCcCHHHHHHH---HHhcCCCchHHHHHhCCCCCCHHHHHHHHHHHHHHHHhcccccccccCCCCcCCCCCccCCCC Confidence 345566655554 45679999988988887643321 11110000 0 000000000001111111111111111 No 198 >protein:vir:78537 Length: 480 # NCBI annotation: gp11 # Family: family:all:524 # MgeID: mge:1853 # MgeName: U2 # Cross-refs: genbank:acc:YP_001491582;genbank:gi:157786405;genbank:GeneID:5625689 Probab=98.39 E-value=8.9e-07 Score=53.75 Aligned_cols=399 Identities=10% Similarity=0.012 Sum_probs=168.8 Q ss_pred Cchhh----hhhcccccccccccccCCchHHHHHhhcCCC----Ccceechh--h-hhccHHHHHHHHHHHHhhccCceE Q lcl|Aclame:pro 1 MDSVK----KFFNFEKRQTSQVIELNKDDEKLLEWLGISP----STISVKGK--N-ALKVATVFACIKILSESVSKLPLK 69 (429) Q Consensus 1 Mg~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~--~-a~~~~~v~~~i~~ia~~ia~~~~~ 69 (429) |+--. ++.....+..... ..+-+..-+.. ....+..+ . -.......-+|+..++.+--..|. T Consensus 1 ~~t~~d~i~~L~~~~~~~~~r~-------~~~~~Yy~G~~~i~~~~~~~~~~~~~~~~~~n~~~~ivd~~~~~l~~~g~~ 73 (480) T protein:vir:78 1 MTTYHEHVERLQGLLARDLPNL-------LEAEAYRNGTRRLKTIGIGAPPELAYLDVQPGWVATYLRTLSDRLDIEGFR 73 (480) T ss_pred CCCHHHHHHHHHHHHHHHHHHH-------HHHHHHHhccccchhcccccchhhhhhhhhcchHHHHHHHHHhhhccCcee Confidence 55422 2221111000000 00000000000 00000000 0 011233455566666655333333 Q ss_pred EEecCCceeeeeecchhhhhhcccCcCCCCHHHHHHHHHHHHHhhCCeEEEEeeC------CCCceEEEEeeCCcceEEE Q lcl|Aclame:pro 70 IYQEDEYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFD------RKGKVQALWPIDASKVTVY 143 (429) Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~l~~~PN~~~s~~~~~~~~~~~~l~~G~~~~~~~~~------~~g~~~~l~~l~p~~v~~~ 143 (429) + .++. .....+..+++. | ........+..+++.+|.||+.+.+. ..|.+ .+.+++|..+.+. T Consensus 74 ~---~~d~---~~~~~l~~i~~~--N---~~~~~~~~~~~~a~~~G~ay~~v~~~~~~~~d~~~~~-~i~~~~p~~~~~i 141 (480) T protein:vir:78 74 I---SEDS---EGLEELWNWWQA--N---DLDEESVLGHDDSLTFGRAYITVSHPDVESGDPAGIP-LIRVESPLYMYAE 141 (480) T ss_pred c---CCCc---hhHHHHHHHHHh--c---CHHHHHHHHHHHHhhcCceEEEeecCccccCCCCCee-EEEEEcccceEEE Confidence 2 1111 112234444432 2 34566778899999999999888653 34443 5778889998888 Q ss_pred EcCCcc--eeeeeeEEEeecccC-----------ceEE---------------------EccceEEEeecCCCCCccccc Q lcl|Aclame:pro 144 IDDVGL--LNSKTKMWYVVNTGG-----------QQRV---------------------LKPEEILHFKNGITLDGLVGV 189 (429) Q Consensus 144 ~~~~~~--~~~~~~~~~~~~~~g-----------~~~~---------------------~~~~evih~~~~~~~~~~~G~ 189 (429) ++.... .......++.....+ .... +..-.|+||.+.......+|. T Consensus 142 ~D~~~~~~~~~~i~~~~~~d~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~vPvv~f~n~~~~~~~~G~ 221 (480) T protein:vir:78 142 LDPRNTRRVTRAVRLYTTRDDVAVPDRATLYLPDETVPLRRNGGLNDQWVVDGDVIKHGLGVVPVVPLTNDPRLGNRYGR 221 (480) T ss_pred EcCCCccceEEEEEEEEeecCCcceEEEEEEeCCeEEEEEecCCCcccccccccccccCCCCcceEEeecccccCCccCc Confidence 765321 111111110000000 0000 112236777655555566788 Q ss_pred CHHHH-HHHHHHHHHHHHHHHHHHHHccCCcceEEEeCCCCCHHHHHHHHHHHHHHhcccccccceeecC-CCceeEecC Q lcl|Aclame:pro 190 PTMEY-LKSTLENSASADKFINNFYKQGLQVKGLVQYVGDLNEDAKKVFRENFESMSSGLQNSHRIALMP-VGYQFQPIS 267 (429) Q Consensus 190 s~~~~-~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~g~~~~~~~~vl~-~g~~~~~~~ 267 (429) |-+.. +...++.............+-.+.|..++.- ....+...+.-...|... .+.++.++ ++.++.++. T Consensus 222 sdi~~~i~~l~Da~~~~~s~~~~~~~~~a~p~~~i~G-~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~ 294 (480) T protein:vir:78 222 SEISPELRKVTDAASRTLMNLQSASQILGTPLRVISG-VTTDELTNDGENTTLDIY------YGRILTLASEAAKISEFK 294 (480) T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHhhcchhhhhhC-CCccccccccccchhhhh------hhhhccCCCCCceEEecC Confidence 86653 4444555444444444444444455444431 111111111111112111 12344444 457777766 Q ss_pred CChhHHHHHHHHHHHHHHHHHHhcCChhhcCCccccccccHHHHHHHHHHHHHhHHHHHHHH----HHHHh------hcc Q lcl|Aclame:pro 268 LNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKATLNNIEQQQQQFYTDTLQATLTMYEQ----EMTYK------LFL 337 (429) Q Consensus 268 ~~~~d~~~~e~~~~~~~~Ia~~fgvp~~~l~~~~~~~~~n~~~~~~~~~~~~l~P~~~~i~~----~l~~~------ll~ 337 (429) ....+ .+++..+..+.+++..-++|+..+++...+ .++.+ + ..+....+.-.+...+. .|.+. +.. T Consensus 295 ~~~~~-~~~~~l~~~i~~~~~~~~~p~~~fg~~~~n-~~Sg~-A-l~~~~~~l~~k~~~~~~~f~~~l~~~~rl~~~~~~ 370 (480) T protein:vir:78 295 AAELR-NFAEEMEVFRKEAASITGLPPQYLSSSSEN-PASAE-A-IIATDSRIVKMAERKGRIFGGAWERAMRIAMQIMG 370 (480) T ss_pred ccCHH-HHHHHHHHHHHHHhcccCCCHHHhccccCc-hhHHH-H-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC Confidence 54433 378888999999999999999999764321 11111 1 11111122222222111 11111 111 Q ss_pred chhhcchhhhhhhhhhHhhhhHHHHHHHHHHHHhCC--CCCHHHHHHHhCCCCCC--Ccceeeecccc-------ccccc Q lcl|Aclame:pro 338 DSELDKGFYSKFNVDAILRADIKTRYEAYRTGIQGG--FLKPNEARSKEDLPPEA--GGDRLLVNGNM-------LPIDM 406 (429) Q Consensus 338 ~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g--~~t~NE~R~~~Gl~~~~--~gD~~~~~~n~-------~~~~~ 406 (429) .........+++.+......+..+.+..+.+++.+| +++..-+++++|+.+.+ ...+....... .+... T Consensus 371 ~~~~~~~~~i~v~w~~~~~~s~~~~ad~~~kl~~~g~~~~s~et~~~~lg~~~d~~~e~~~~~~~~~~~~~~~~~~~~~~ 450 (480) T protein:vir:78 371 REVTEEYTRLETVWRDPSTPTVAAKADAVSKLYANGQGPIPKEQARIDLGYTATQREQMRDWDKQETEDMIDTLYSTTKA 450 (480) T ss_pred CCccccceeeeEEecCCCCCCHHHHHHHHHHHHHhcccCCCHHHHHhcCCCCHhHHHHHHHHHHHHHHHHHHHhhccccC Confidence 111111122333333444567778888888888866 66777778899987643 11111101111 11111 Q ss_pred cccccC--CCCCCCCCCCCCCCCCC Q lcl|Aclame:pro 407 AGQAYL--KGGDTNGEVSKEGNEGN 429 (429) Q Consensus 407 ~~~~~~--~~g~~~~~~~~~~~~~n 429 (429) .++.+. ..|+...+...+.+.-+ T Consensus 451 ~~~~~~~~~~~~~~~~~~~~~~~~~ 475 (480) T protein:vir:78 451 QADATPKPTVTETKTETQTSPSGFN 475 (480) T ss_pred CCccccCCCCCCCCCccCCCcccCC Confidence 111111 11222111111111111 No 199 >protein:vir:3609 Length: 452 # NCBI annotation: ORF32 # Family: family:all:125 # MgeID: mge:74 # MgeName: TP901-1 # Cross-refs: genbank:acc:NP_112695;genbank:gi:13786563;genbank:GeneID:921063 Probab=98.36 E-value=1e-06 Score=53.41 Aligned_cols=384 Identities=14% Similarity=0.041 Sum_probs=175.4 Q ss_pred Cc--hhhhhhcccccccccccccCCchHHHHHhhcCCCCc------ceechhhhhccHHHHHHHHHHHHhhccCceEEEe Q lcl|Aclame:pro 1 MD--SVKKFFNFEKRQTSQVIELNKDDEKLLEWLGISPST------ISVKGKNALKVATVFACIKILSESVSKLPLKIYQ 72 (429) Q Consensus 1 Mg--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~ 72 (429) |. .+.++.......... ...+.++....... ....+..=+..+.....|+..+..+-+-|+.+.. T Consensus 17 ~~~~~i~~~i~~~~~~~~r-------~~~~~~Yy~g~~~i~~~~~~~~~~~~~ki~~n~~~~ivd~~~~~l~g~~~~~~~ 89 (452) T protein:vir:36 17 ITVEVVTKFMEKHKLEVAR-------YEYLKNMYLGIMAIDDEPAKDSWKPDNRLAVNFTKYIVDTFTGYFNGIPVKKSH 89 (452) T ss_pred CCHHHHHHHHHHHHHHHHH-------HHHHHHHhccccccccCccccccCccceeecchHHHHHHHHhhhhcccCceeec Confidence 11 122221100000000 00000000000000 0000000012355666777777777777777653 Q ss_pred cCCceeeeeecchhhhhhcccCcCCCCHHHHHHHHHHHHHhhCCeEEEEeeCCCCceEEEEeeCCcceEEEEcCCcceee Q lcl|Aclame:pro 73 EDEYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVYIDDVGLLNS 152 (429) Q Consensus 73 ~~~~~~~~~~~~~~~~~l~~~PN~~~s~~~~~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~l~p~~v~~~~~~~~~~~~ 152 (429) .+++ ....+..++. .-........+..+.+.+|.+|+++..+.+|.+ .+..++|..+.++.++...... T Consensus 90 ~d~~-----~~~~l~~~~~-----~n~~~~~~~~~~~~~~~~G~~~~~v~~d~~g~~-~i~~~~p~~~~~v~d~~~~~~~ 158 (452) T protein:vir:36 90 SDKE-----ILTKLQEFDN-----LNDMEDEESELAKMACIYGRAFEFLYQDEDTQT-NVVYNSPENMFMVYDDTVKQEP 158 (452) T ss_pred CChh-----HHHHHHHHHh-----hcChhHHHHHHHHHHHhcCeEEEEEEecCCCee-EEEEEcccceEEEEcCCCCCce Confidence 3321 1122333332 123455667788899999999999999888875 5777889988887765321111 Q ss_pred eeeEEEeecccCc--eEEEccceEEEeec-----------CCC---------CCcccccCHHHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 153 KTKMWYVVNTGGQ--QRVLKPEEILHFKN-----------GIT---------LDGLVGVPTMEYLKSTLENSASADKFIN 210 (429) Q Consensus 153 ~~~~~~~~~~~g~--~~~~~~~evih~~~-----------~~~---------~~~~~G~s~~~~~~~~i~~~~~~~~~~~ 210 (429) .....++...++. ...+++..++++.. +++ .+...|.|-+......++.......... T Consensus 159 ~~~i~~~~~~~~~~~~~vyt~~~i~~~~~~~~~~~~~~~~~~~~g~iPvv~~~n~~~g~sd~e~v~~liDa~d~~~s~~~ 238 (452) T protein:vir:36 159 LFAVRYGVDEDKKLQGEVYTLLETIKISGENDEISFGEGTYNPYPDLPVVEFYFNEERMSIFESVISLVNAFNKAISEKA 238 (452) T ss_pred EEEEEEEEecCceEEEEEEecCeEEEEEEcCCceEEecceeccCCcccEEEecCCCCCCcchHHHHHHHHHHHHHHHHHH Confidence 1111111111111 11122222222210 000 0123577888877777777777776676 Q ss_pred HHHHccCCcceEEEeCCCCCHHHHHHHHHHHHHHhcccccccceeecCC-------CceeEecCCChhHHHHHHHHHHHH Q lcl|Aclame:pro 211 NFYKQGLQVKGLVQYVGDLNEDAKKVFRENFESMSSGLQNSHRIALMPV-------GYQFQPISLNMSDAQFLENTELTI 283 (429) Q Consensus 211 ~~~~ng~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~g~~~~~~~~vl~~-------g~~~~~~~~~~~d~~~~e~~~~~~ 283 (429) +.++..+.|..++.- ....++....++. .+++.++. +++|..... ....+....+... T Consensus 239 ~~~~~~~~p~~~~~g-~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~l~ 303 (452) T protein:vir:36 239 NDVDYFSDQYLTFLG-AAVEEEDLKNIRS------------NRVINYYADGEGKNVDVKFLEKPD--SDSQTENLLDRLT 303 (452) T ss_pred HHHHHhcCceeEeec-CCcCchhhhhhhh------------cceEEecCCCCccCCcceeEeecC--CHHHHHHHHHHHH Confidence 666777777655542 2333333322211 11222221 244443333 3444567778888 Q ss_pred HHHHHHhcCChhhcCCccccccccHH----------HHHHHHHHHHHhHHHHHHHHHHHHhhccchhhcchhhhhhhhhh Q lcl|Aclame:pro 284 RQIATAFGIKMHQLNDLSKATLNNIE----------QQQQQFYTDTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDA 353 (429) Q Consensus 284 ~~Ia~~fgvp~~~l~~~~~~~~~n~~----------~~~~~~~~~~l~P~~~~i~~~l~~~ll~~~~~~~~~~~~fd~~~ 353 (429) +.|+..-++|..-.+..+..++...+ ......+..++..+++.|..-+..+ ..........+.| .. T Consensus 304 ~~I~~~s~~p~~~~~~~gn~Sg~Al~~~~~~l~~k~~~~~~~~~~~l~~~~~li~~~~~~~--~~~~~~~~i~i~f--~~ 379 (452) T protein:vir:36 304 KLIFQTTMVANISDESFGSSSGVSLAYKLQAMSNLALSFQRKFQSSLNSRYKLFCELSTNV--SNKDSWKDIEYTF--TR 379 (452) T ss_pred HHHHHHhCccccCcccccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc--CCccccccceEEe--CC Confidence 88888888875433222222211111 1123444555555555555433321 1111112334445 44 Q ss_pred HhhhhHHHHHHHHHHHHhCCCCCHHHHHHHhCCCCCCC--cceeeeccccccccccccccCCCCCCCC-CCCCCCCCCC Q lcl|Aclame:pro 354 ILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEAG--GDRLLVNGNMLPIDMAGQAYLKGGDTNG-EVSKEGNEGN 429 (429) Q Consensus 354 l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~Gl~~~~~--gD~~~~~~n~~~~~~~~~~~~~~g~~~~-~~~~~~~~~n 429 (429) -+..|..+.++.+.++ +|+++..-+.++++.-+.+. .+.+..- .-.... ..+....+. ...+..++++ T Consensus 380 ~~p~d~~~~a~~~~k~--~g~iS~et~~~~~~~~~d~~~E~~ri~~E-~~~~~~-----~~~~~~~~~~~~~~~~~~~~ 450 (452) T protein:vir:36 380 NEPKDIKEQAETANIL--MGITSQETALSVISVIPDVQAEMEKIKKE-EASTAI-----FDKDKQPSEKGTDTVVSETN 450 (452) T ss_pred CCCcCHHHHHHHHHHH--hccCChHHHHHhCCCCCCHHHHHHHHHHH-HHHHHH-----HHhhccCCCCcccccCcccc Confidence 5678888889888887 68899888888887644321 1111000 000000 001111111 1112222222 No 200 >protein:vir:1634 Length: 409 # NCBI annotation: Structural protein # Family: family:all:524 # MgeID: mge:33 # MgeName: r1t # Cross-refs: genbank:acc:NP_695055;genbank:gi:23455746;genbank:GeneID:955506 Probab=98.36 E-value=1.1e-06 Score=53.28 Aligned_cols=347 Identities=11% Similarity=0.078 Sum_probs=157.6 Q ss_pred CchhhhhhcccccccccccccCCchHHHHHhhcCCCC--cceechhhh----hc--cHHHHHHHHHHHHhhccCceEEEe Q lcl|Aclame:pro 1 MDSVKKFFNFEKRQTSQVIELNKDDEKLLEWLGISPS--TISVKGKNA----LK--VATVFACIKILSESVSKLPLKIYQ 72 (429) Q Consensus 1 Mg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~a----~~--~~~v~~~i~~ia~~ia~~~~~~~~ 72 (429) ..+++.+.....+.... ...+.++...... ...++.... ++ .....-+|+.++..+.=-.| + T Consensus 3 ~~~i~~L~~~~~~~~~r-------~~~~~~yY~g~~~~~~~~~~~p~~~~~~~~~v~nw~~~iVds~a~rl~~~Gf---~ 72 (409) T protein:vir:16 3 EKGIGYLRFKLSVHKRR-------AEMRYEQYAMKHVDRFKGITIPQALSQQYRSILGWCAKGVDSLADRLVFREF---E 72 (409) T ss_pred HHHHHHHHHHHHHHhHH-------HHHHHHHHhccCchhhcchhhhHHHHHHHhhhcChhHHHHHHhHhhcccccc---c Confidence 22233333211111100 0001111110000 001110000 11 12333345555443322222 2 Q ss_pred cCCceeeeeecchhhhhhcccCcCCCCHHHHHHHHHHHHHhhCCeEEEEeeCCCCceEEEEeeCCcceEEEEcCCcceee Q lcl|Aclame:pro 73 EDEYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVYIDDVGLLNS 152 (429) Q Consensus 73 ~~~~~~~~~~~~~~~~~l~~~PN~~~s~~~~~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~l~p~~v~~~~~~~~~~~~ 152 (429) .++ ..+...+. + | +.......+..+.+.+|.+|+.+..+.+|.+ .+.+++|..+.+.++....... T Consensus 73 ~~d--------~~l~~i~~-~-N---~ld~~~~~~~~~al~yG~sf~~v~~~~dg~~-~i~~~sP~~~~~i~D~~~~~~~ 138 (409) T protein:vir:16 73 NDD--------FTVNEIFE-E-N---NPDIFFDSTVLSALIASCSFTYISKGENDAV-RLQVIEATNATGIIDPITGLLT 138 (409) T ss_pred Ccc--------hHHHHHHH-h-c---ChhHHHHHHHHHHHHhCceeEEEecCCCCce-EEEEEcccceEEEeecccccce Confidence 111 12333332 1 2 3344556788889999999999998888875 7888899888887765321111 Q ss_pred eeeEEEeecccCce---EEEc----------------------cceEEEeecCCCCCcccccCHH----HHHHHHHHHHH Q lcl|Aclame:pro 153 KTKMWYVVNTGGQQ---RVLK----------------------PEEILHFKNGITLDGLVGVPTM----EYLKSTLENSA 203 (429) Q Consensus 153 ~~~~~~~~~~~g~~---~~~~----------------------~~evih~~~~~~~~~~~G~s~~----~~~~~~i~~~~ 203 (429) ....++.....+.. ..+. .--|++|.+.......+|.|-+ ..+...+.... T Consensus 139 ~a~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~vPvV~f~n~~~~~~~~G~seI~~~v~~l~da~~r~~ 218 (409) T protein:vir:16 139 EGYAVLERDENNNVVLEAHFLPDRTDYYYRDSRNNISIANPTGNPLLVPIIHRPDAVRPFGRSRITRSGMYWQSNAKRTL 218 (409) T ss_pred eeeEEEEecCCCceEEEEEEecCcEEEEEecCccccceecCCCCcceEEecccccccccCCccccchhHHHHHHHHHHHH Confidence 11111111111110 0011 1126666654444566788744 44444444443 Q ss_pred HHHHHHHHHHHccCCcceEEE-eCCCCCHHHHHHHHHHHHHHhcccccccceeecC-----CCceeEecCCChhHHHHHH Q lcl|Aclame:pro 204 SADKFINNFYKQGLQVKGLVQ-YVGDLNEDAKKVFRENFESMSSGLQNSHRIALMP-----VGYQFQPISLNMSDAQFLE 277 (429) Q Consensus 204 ~~~~~~~~~~~ng~~~~~~~~-~~~~~~~e~~~~~~~~~~~~~~g~~~~~~~~vl~-----~g~~~~~~~~~~~d~~~~e 277 (429) .-......++ +.|.-++. .+.+..+. +. |+.. .++++.++ .+.++.+++.+.-+ .+++ T Consensus 219 ~~~~~~~e~~---a~pqr~i~G~d~d~~~~--~~----~~~~------~~~i~~~~~d~~g~~~~v~q~~~~~l~-~~~~ 282 (409) T protein:vir:16 219 ERADVTAEFY---SFPQKYVTGLSDDAEPM--ET----WKAT------VSSMLQFTKDEDGDKPTLGQFTQPSMS-PFTE 282 (409) T ss_pred HHHHHHHHHh---cChhheeEecCCCCCcc--ch----hhhh------hhHhhccCCCCCCCCceEEecCCCChh-HHHH Confidence 3333444443 44444443 33332222 12 2211 12344443 34667666544323 3789 Q ss_pred HHHHHHHHHHHHhcCChhhcCCcccc--ccccHHHHHHHHHHHHHhHHHHHHHHHHHHh----hccch------hhcchh Q lcl|Aclame:pro 278 NTELTIRQIATAFGIKMHQLNDLSKA--TLNNIEQQQQQFYTDTLQATLTMYEQEMTYK----LFLDS------ELDKGF 345 (429) Q Consensus 278 ~~~~~~~~Ia~~fgvp~~~l~~~~~~--~~~n~~~~~~~~~~~~l~P~~~~i~~~l~~~----ll~~~------~~~~~~ 345 (429) ..+..+..+|..=++|+..||+...+ +...+.++...+...+ .-..+.+.+.+.+- +.... ....+. T Consensus 283 ~l~~~~~~~a~~s~lP~~~lg~~~~NpsSa~Ai~a~~~~L~~ka-~~k~~~fg~~l~~~~rla~~~~~~~~~~~~~~~~~ 361 (409) T protein:vir:16 283 QLRTAAAGFAGETGLTLDDLGFVSDNPSSVEAIKASHENLRLAG-RKAQRSLGAGLLNVAYLAACLRDDVPYLREQFSKT 361 (409) T ss_pred HHHHHHHHHhhhcCCCHHHcccccCchhHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhcCCCccchhhccc Confidence 99999999999999999999875431 1112222222221111 11111122222111 11000 001122 Q ss_pred hhhhhhhhHh---hhhHHHHHHHHHHHHhCCC--CCHHHHHHHhCCCCCC Q lcl|Aclame:pro 346 YSKFNVDAIL---RADIKTRYEAYRTGIQGGF--LKPNEARSKEDLPPEA 390 (429) Q Consensus 346 ~~~fd~~~l~---~~d~~~~~~~~~~~~~~g~--~t~NE~R~~~Gl~~~~ 390 (429) .+.| .... ..+....++++.|++.+|. +..+-+++++|+..-+ T Consensus 362 ~v~W--~~~~~~~~~s~a~~aDa~~Kl~~a~~~~~~~~v~~~~~g~~~~d 409 (409) T protein:vir:16 362 KPKW--EPLFEADASMLSLIGDGAIKLNQAIPEFINKDTIRDLTGIKGAE 409 (409) T ss_pred eEEe--cCCCCcchhhHHHHHHHHHHHHhhcccccchhHHHHhccCCCCC Confidence 3333 3222 3346788889999999963 3456779999998765 No 201 >protein:vir:2500 Length: 501 # NCBI annotation: putative portal gp5 # Family: family:all:524 # MgeID: mge:53 # MgeName: TM4 # Cross-refs: genbank:acc:NP_569741;genbank:gi:18496891;genbank:GeneID:932330 Probab=98.34 E-value=1.2e-06 Score=53.02 Aligned_cols=387 Identities=9% Similarity=0.022 Sum_probs=163.0 Q ss_pred CchhhhhhcccccccccccccCCchHHHHHhhcCCCC--cceechhhhh-------ccHHHHHHHHHHHHhhccCceEEE Q lcl|Aclame:pro 1 MDSVKKFFNFEKRQTSQVIELNKDDEKLLEWLGISPS--TISVKGKNAL-------KVATVFACIKILSESVSKLPLKIY 71 (429) Q Consensus 1 Mg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~a~-------~~~~v~~~i~~ia~~ia~~~~~~~ 71 (429) .-++..+++...+.... ...+-++...... .........+ .+....-+|+.++..+--..|.+ T Consensus 29 ~~l~~~l~~~~~~~~~r-------l~~l~~YY~G~~~~~~~~~~~~~~~~~~~~~~v~n~~~~ivd~~a~~l~~~gf~~- 100 (501) T protein:vir:25 29 GALVADMWRLHISERQW-------LDRIYEYTKGLRGRPEVPEGASDEVKELAKLSVKNVLSLVRDSFAQNLSVVGYRN- 100 (501) T ss_pred HHHHHHHHHHHHHHHHH-------HHHHHHHHhcCCCchhccccCChhhhhhHhhhhcChHHHHHHHHHhhhcccceec- Confidence 22234444322111100 0111111111110 0011000111 11233445555555442222322 Q ss_pred ecCCceeeeeecchhhhhhcccCcCCCCHHHHHHHHHHHHHhhCCeEEEEeeCCCCceEEEEeeCCcceEEEEcCCcce- Q lcl|Aclame:pro 72 QEDEYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVYIDDVGLL- 150 (429) Q Consensus 72 ~~~~~~~~~~~~~~~~~~l~~~PN~~~s~~~~~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~l~p~~v~~~~~~~~~~- 150 (429) .++.. ...+..++. -|. .......+..+++.+|.||+.+.++..|. .+..++|..+.+..++.... T Consensus 101 --~d~~~----~~~l~~i~~--~N~---~d~~~~~~~~~a~i~G~ay~~v~~de~~~--~i~~~sp~~~~~iy~D~~~~~ 167 (501) T protein:vir:25 101 --ALAKE----NDPAWEMWQ--RNR---MDARQAEVHRPALTYGASYVTVTPTDEGP--VFRTRSPRQILAVYADPSVDA 167 (501) T ss_pred --CCccc----hHHHHHHHH--hcC---hhHHHHHHHHHHhhcCceEEEEecCCCCC--eEEEeccccEEEEEecCCCCc Confidence 22111 123333332 232 34555678889999999999998888774 46678898888665332111 Q ss_pred -eeeeeEEEeeccc-Cc---eEE----------------------------------------------EccceEEEeec Q lcl|Aclame:pro 151 -NSKTKMWYVVNTG-GQ---QRV----------------------------------------------LKPEEILHFKN 179 (429) Q Consensus 151 -~~~~~~~~~~~~~-g~---~~~----------------------------------------------~~~~evih~~~ 179 (429) ......++..... +. ... |..--|+||.+ T Consensus 168 ~~~~ai~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vPiv~f~N 247 (501) T protein:vir:25 168 WPQYALETWVAQKDAKPHRRGVLYDDTYMYELDLGEVVLGDAGGGQATQQPVNVREVTDVIEHGATFEGKPVCPVVRFVN 247 (501) T ss_pred ceeEEEEEEeeccccCcceeEEEecCeeEEEEecCceeeeeccccccccccccccccccccccccccCCccceeeEeccC Confidence 0001111100000 00 000 11113555553 Q ss_pred CCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHHccCCcceEEEeCCCCCHHHHHHHHHHHHHHhcccccccceeecC- Q lcl|Aclame:pro 180 GITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGDLNEDAKKVFRENFESMSSGLQNSHRIALMP- 258 (429) Q Consensus 180 ~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~g~~~~~~~~vl~- 258 (429) . +.....|.|-++.....++......-......+-.+.|.-++.- ...++.+. |+ . ..+++++++ T Consensus 248 ~-~~~~~~g~sdie~v~~l~Da~~~~~s~~~~~~e~~a~p~~~i~G---~~~~~~~~----~~-~-----~~~~i~~~~~ 313 (501) T protein:vir:25 248 G-RDADDMIVGEVAPLILLQQAINSVNFDRLIVSRFGANPQRVISG---WTGSKAEV----LK-A-----SALRVWTFED 313 (501) T ss_pred c-cccCccccchhhhhHHHHHHHHHHHHHHHHHHHhhccHHHHHhC---CCCCccch----hh-h-----cccceeccCC Confidence 2 22234578877666555555555544444444444444333321 12222221 11 1 124466666 Q ss_pred CCceeEecCCChhHHH-HHHHHHHHHHHHHHHhcCChhhcCCccccccccHHHHHHHHHHHHHhHHHH----HHHHHHHH Q lcl|Aclame:pro 259 VGYQFQPISLNMSDAQ-FLENTELTIRQIATAFGIKMHQLNDLSKATLNNIEQQQQQFYTDTLQATLT----MYEQEMTY 333 (429) Q Consensus 259 ~g~~~~~~~~~~~d~~-~~e~~~~~~~~Ia~~fgvp~~~l~~~~~~~~~n~~~~~~~~~~~~l~P~~~----~i~~~l~~ 333 (429) ++.++.++... +++ +.+.++..+.+|+..-++|+..+++... |.......+....+.-.+. .|...|.+ T Consensus 314 ~~~~~~q~~~~--~~~~~~~~l~~~i~~i~~~s~~P~~~~~~~~~----N~Sg~Al~~~~~~l~~ka~~k~~~f~~~l~~ 387 (501) T protein:vir:25 314 PEVKAQAFPPA--SVEPYNLILEEMLQHVAMVAQISPAQVTGKMI----NVSAEALAAAEANQQRKLAAKRESFGESWEQ 387 (501) T ss_pred CCceEEEeccc--ChHHHHHHHHHHHHHHHhhcCCChhhhccccC----ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Confidence 46777665433 333 7789999999999999999999875432 1111111222222222222 22222221 Q ss_pred h------hccchhhcchhhhhhhhhhHhhhhHHHHHHHHHHHHhCCCCCHHHHHH-HhCCCCCC--Ccceeeecc---cc Q lcl|Aclame:pro 334 K------LFLDSELDKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARS-KEDLPPEA--GGDRLLVNG---NM 401 (429) Q Consensus 334 ~------ll~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~-~~Gl~~~~--~gD~~~~~~---n~ 401 (429) - +...........+++.+......+..+.++++.++..+|+ +.-.+.. +.|+.+.+ ......... .. T Consensus 388 ~~rl~~~~~~~~~~~~~~~i~v~w~~~~~~s~~~~ada~~kl~~~gi-s~et~~~~~~g~~~~~ie~~~~~~~e~~~~~~ 466 (501) T protein:vir:25 388 LLRLAAEMDDDPDTAADSGAEVLWRDTEARSFGAVVDGITKLASAGI-PIEHLLSMVPGMTQQTIQAIKDSLRGGEVKSL 466 (501) T ss_pred HHHHHHHHhCCCccccceeeeEEecCCCCCCHHHHHHHHHHHHhcCC-CHHHHHHHcCCCCHHHHHHHHHHHHHHhHHHH Confidence 1 0111111111234444456677889999999999998885 5555444 45876521 000000000 00 Q ss_pred --cccccc--ccccCCCCCCCCCCCCCCCCCC Q lcl|Aclame:pro 402 --LPIDMA--GQAYLKGGDTNGEVSKEGNEGN 429 (429) Q Consensus 402 --~~~~~~--~~~~~~~g~~~~~~~~~~~~~n 429 (429) .++... +.....+++.....+..++.++ T Consensus 467 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 498 (501) T protein:vir:25 467 VDKLLSNEPAPVPPPPPQAAAQALNEGGVNGN 498 (501) T ss_pred HHHhhccCcCCCCCCCCCCCccccccccCCCC Confidence 000000 0011111111111111111222 No 202 >protein:vir:96839 Length: 474 # NCBI annotation: ORF008 # Family: family:all:125 # MgeID: mge:1642 # MgeName: EW # Cross-refs: genbank:acc:YP_240152;genbank:gi:66395815;genbank:GeneID:5133180 Probab=98.32 E-value=1.3e-06 Score=52.79 Aligned_cols=382 Identities=10% Similarity=0.060 Sum_probs=176.8 Q ss_pred CchhhhhhcccccccccccccCCchHHHHHhhcCCC----------Ccc---eechhhhhccHHHHHHHHHHHHhhccCc Q lcl|Aclame:pro 1 MDSVKKFFNFEKRQTSQVIELNKDDEKLLEWLGISP----------STI---SVKGKNALKVATVFACIKILSESVSKLP 67 (429) Q Consensus 1 Mg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~---~~~~~~a~~~~~v~~~i~~ia~~ia~~~ 67 (429) =.++.++....+..... -..+..+..... ... ...+..=+.++....+++..++.+-+-| T Consensus 28 ~~~i~~~i~~~~~~~~~-------~~~~~~Yy~g~~~i~~~~~~~~~~~~~~~~~~~~ki~~n~~~~Ivd~~~~~l~g~p 100 (474) T protein:vir:96 28 EEMIIRLINDHKPKIDD-------ITVGERYYNHDPDVLRLAPKLDNKGEIDPLKPDWRMFTNYHQNLVDQKVAYAVANP 100 (474) T ss_pred HHHHHHHHHHHHHHHHH-------HHHHHHHhccCCcchhccchhcccccccccccchhcccchHHHHHHhhhhhhcccC Confidence 01112221111000000 000000000000 000 0000001224566677888888887777 Q ss_pred eEEEecCCceeeeeecchhhhhhcccCcCCCCHHHHHHHHHHHHHhhCCeEEEEeeCCCCceEEEEeeCCcceEEEEcCC Q lcl|Aclame:pro 68 LKIYQEDEYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVYIDDV 147 (429) Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~l~~~PN~~~s~~~~~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~l~p~~v~~~~~~~ 147 (429) +.+...+++ ....+...+. | ........+...+..+|.+|+.+..+..|++ .+..++|..+.++.++. T Consensus 101 ~~~~~~d~~-----~~~~l~~~~~---n---~~~~~~~~~~~~~~~~G~~~~~~y~d~~~~~-~i~~~~p~~~~~v~d~~ 168 (474) T protein:vir:96 101 VTFSSDDDK-----SLKTIQEVLN---H---KWDDKLVDILTAASNKGIEWLQPYIDENGEF-KTFRVPAEQAIPIWTNK 168 (474) T ss_pred ceeecCchH-----HHHHHHHHHh---c---CHHHHHHHHHHHHHhcCeeEEEEEecCCCce-EEEEEcccceEEEEcCC Confidence 776433321 1123333332 1 3345556677888999999999988888876 48889999998887653 Q ss_pred cceee-eeeEEEeecccCceEEEccce---------------------------------------EEEeecCCCCCccc Q lcl|Aclame:pro 148 GLLNS-KTKMWYVVNTGGQQRVLKPEE---------------------------------------ILHFKNGITLDGLV 187 (429) Q Consensus 148 ~~~~~-~~~~~~~~~~~g~~~~~~~~e---------------------------------------vih~~~~~~~~~~~ 187 (429) ..... ....+|..........+.... |++|++ ... T Consensus 169 ~~~~~~~~vr~~~~~~~~~~~~yt~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iPvv~~~n-----n~~ 243 (474) T protein:vir:96 169 ERDTLKAFIRYYRLDGAERVEYWTDSDVTYYEYQDGILIPDYYHGEEHIQSHYYVGNKRVSWGRVPFIPFKN-----NPQ 243 (474) T ss_pred CCCceEEEEEEEeecCceEEEEEeCCeEEEEEecCCceeeccccccccccccccccccccCCCceeEEEecc-----CCC Confidence 22111 111111111111111122222 333332 235 Q ss_pred ccCHHHHHHHHHHHHHHHHHHHHHHHHccCCcceEEEeCCCCCHHHHHHHHHHHHHHhcccccccceeecC-CCceeEec Q lcl|Aclame:pro 188 GVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGDLNEDAKKVFRENFESMSSGLQNSHRIALMP-VGYQFQPI 266 (429) Q Consensus 188 G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~g~~~~~~~~vl~-~g~~~~~~ 266 (429) |.|-++.....++....+.....+.++..+.|-.+++--.. ++.+.... .. ...+++.++ +|-++..+ T Consensus 244 g~sd~e~v~~liDa~d~~~S~~~~~~~~~~~~~lv~~g~~~---~~~~~~~~----~~----~~~~~i~~~~~~~~~~~l 312 (474) T protein:vir:96 244 EMSDLFMYKTIIDAMDKRLSDTQNTFDESTELIYILKGYEG---QDLDEFMR----NL----KYYKAINVDGDGSGVDTI 312 (474) T ss_pred CCCcHHHHHHHHHHHHHHHHHHHHHHHHhccceeeeecCCc---ccccchhh----hh----hcCceEEecCCCCceeEE Confidence 78888888888887777777777777777777666543221 11111111 11 113455554 45555554 Q ss_pred CCChhHHHHHHHHHHHHHHHHHHhcCChhhcCCc-cccccccHH----------HHHHHHHHHHHhHHHHHHHHHHHHhh Q lcl|Aclame:pro 267 SLNMSDAQFLENTELTIRQIATAFGIKMHQLNDL-SKATLNNIE----------QQQQQFYTDTLQATLTMYEQEMTYKL 335 (429) Q Consensus 267 ~~~~~d~~~~e~~~~~~~~Ia~~fgvp~~~l~~~-~~~~~~n~~----------~~~~~~~~~~l~P~~~~i~~~l~~~l 335 (429) ........+.+..+...+.|+..-++|....... +..++-..+ ......+...+..+++.|..-+. T Consensus 313 ~~~~~~~~~~~~~~~l~~~i~~~s~~p~~~~~~~~~n~Sg~Al~~~~~~l~~k~~~k~~~~~~~l~~~~~~i~~~~~--- 389 (474) T protein:vir:96 313 QIEVPVQSSKEYLDMLRDYVIEFGQGVDFQQDKFGNSPSGIALKFMYSNLDLKANKLKNKTLTALQELLQYIIDFYK--- 389 (474) T ss_pred eecCChHHHHHHHHHHHHHHHHHhCCccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC--- Confidence 4444444567778888899999999886543221 111111111 11223344444444444443321 Q ss_pred ccchhhcchhhhhhhhhhHhhhhHHHHHHHHHHHHhCCCCCHHHHHHHhCCCCCCCcceeeeccccccccccccccCCCC Q lcl|Aclame:pro 336 FLDSELDKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEAGGDRLLVNGNMLPIDMAGQAYLKGG 415 (429) Q Consensus 336 l~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~Gl~~~~~gD~~~~~~n~~~~~~~~~~~~~~g 415 (429) .........+.| ..-+..+..+.++. +..+|+++...++++++.-+.+....-.+-.- ..+.........+ T Consensus 390 --~~~~~~~i~i~f--~~~~p~~~~e~~~~---~~~ag~iS~et~~~~~~~v~d~~~E~~ri~~E--~~e~~~~~~~~~~ 460 (474) T protein:vir:96 390 --LNIKVQDVEITF--NFNVMVNELEQSQI---GVQSQYLSKETVVTNHPWVDDPVAELERIEQD--NIDFNKQLPPLEG 460 (474) T ss_pred --CCcccceeeEEe--ccCCCcCHHHHHHH---HHhcCCCchHHHHHhCCCCCCHHHHHHHHHHH--HHHHHhccccccc Confidence 111122234445 33355666665554 55689999999999886533221000000000 0000011111122 Q ss_pred CCCCCCCCCCCCCC Q lcl|Aclame:pro 416 DTNGEVSKEGNEGN 429 (429) Q Consensus 416 ~~~~~~~~~~~~~n 429 (429) +.++..++++-|+| T Consensus 461 ~~~~~~~d~~~e~~ 474 (474) T protein:vir:96 461 DANGRAQDNESETN 474 (474) T ss_pred ccccccCCCcccCC Confidence 22333333333444 No 203 >protein:vir:4073 Length: 279 # NCBI annotation: minor structural protein # Family: family:all:11744 # MgeID: mge:85 # MgeName: c2 # Cross-refs: genbank:acc:NP_043552;genbank:gi:9628686;genbank:GeneID:1261159 Probab=98.29 E-value=6.9e-09 Score=65.34 Aligned_cols=278 Identities=14% Similarity=0.127 Sum_probs=148.3 Q ss_pred hccHHHHHHHHHHHHhhccCceEEEecCCceeeeeecchhhhhhcccCcCCCCHHHHHHHHHHHHHhhCCeEEEEeeCCC Q lcl|Aclame:pro 47 LKVATVFACIKILSESVSKLPLKIYQEDEYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRK 126 (429) Q Consensus 47 ~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~~~~~~~~~~~~~l~~~PN~~~s~~~~~~~~~~~~l~~G~~~~~~~~~~~ 126 (429) |.. ..+...|++++=-.|.+...+.+ ..-..+.-++..--|..++-..-.+.+..+ .+.|.-...+... T Consensus 1 ~~~----~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-- 69 (279) T protein:vir:40 1 MSL----FNLSRRAEDVSFSTFTVQDPTTD----LLLGKLLGLVSYFDNVDYSEASKLEDLFYW-ALQGKEVYRVWYG-- 69 (279) T ss_pred Ccc----cccchhhcccceeeeeecCcchh----HHHHHHHHHHHHhhcccchhhhhhhhhhhh-hhccceeehhhhh-- Confidence 110 01222333443333333322211 000122233333455556555555554443 3334322111110 Q ss_pred CceEEEEeeCCcceEEEEcCCcceeeeeeEEEeecccCceEEEccceEEEeecCCCCCcccccCHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 127 GKVQALWPIDASKVTVYIDDVGLLNSKTKMWYVVNTGGQQRVLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASAD 206 (429) Q Consensus 127 g~~~~l~~l~p~~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~evih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~ 206 (429) |.. .-+.+|. .+ ........++.+..++|-.++..|-++. +|.-+- ....-++++ . T Consensus 70 ~~~-----~~~~~~~--~d--------~fn~~vr~~~~~~vtVP~~Dv~IieNPl-----v~v~~e-e~~kM~~la---~ 125 (279) T protein:vir:40 70 GFK-----YYAQRVN--AD--------QFNIVVREPNRREVTIRTNDYEMLLNPF-----YGANPQ-RFGVMFGMA---S 125 (279) T ss_pred hHH-----HHHhhcC--cc--------hhhhheecCCcceeEeecchhhhhhcch-----heeccc-hhhHHHHHH---H Confidence 100 0011110 00 0011222334455667777877775432 333222 222222222 3 Q ss_pred HHHHHHHHccCCcceEEEeCCC-CCHHHHHHHHHHHHHHhcccccccceeecCCCceeEecCCChhHHHHHHHHHHHHHH Q lcl|Aclame:pro 207 KFINNFYKQGLQVKGLVQYVGD-LNEDAKKVFRENFESMSSGLQNSHRIALMPVGYQFQPISLNMSDAQFLENTELTIRQ 285 (429) Q Consensus 207 ~~~~~~~~ng~~~~~~~~~~~~-~~~e~~~~~~~~~~~~~~g~~~~~~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~ 285 (429) +....-+.+.+..+++++++.+ ..++..++.+.++.++..++.+-+++.+++.|-++++++-+..-. .++..++.+.+ T Consensus 126 nai~~KLD~~~qIk~fIKTd~d~glee~kekaR~rIk~mlalAk~~nGityid~~ddItQL~kDYSts-lk~die~lkS~ 204 (279) T protein:vir:40 126 NGIGRRLDSQAQIKIYWKTKVSSGLKEVWDRIRERLTQQQQLAREFNGVSVIGSDDDIKQIQPDYSGS-LQNDANLAIEI 204 (279) T ss_pred hhhhhhhcccceeeeEEecCcchhHHHHHHHHHHHHHHHHHHHHhcCCeeeecCCceeEeeccccccc-cHHHHHHHHHH Confidence 3334444888899999999877 467778889999999998887667899999999999998876655 46778888999 Q ss_pred HHHHhcCChhhcCCccccccccHHHHHHHHHHHHHhHHHHHHHHHHHHhhccchhhcchhhhhhhhhhHhhhhHHHHHHH Q lcl|Aclame:pro 286 IATAFGIKMHQLNDLSKATLNNIEQQQQQFYTDTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAILRADIKTRYEA 365 (429) Q Consensus 286 Ia~~fgvp~~~l~~~~~~~~~n~~~~~~~~~~~~l~P~~~~i~~~l~~~ll~~~~~~~~~~~~fd~~~l~~~d~~~~~~~ 365 (429) .+..+|||..+|-+ +..+++..+|+..+|.|++++.+.+|.. ..+ ..+.|-+ T Consensus 205 l~Sq~GinekIL~G------sAtE~q~iAyy~rtVePILkQyek~liY----~~E----~fv~y~t-------------- 256 (279) T protein:vir:40 205 ALSEYGMPRELLYG------QSNEVTIIAFAIQKVLPLLKQHDKNIIF----NQE----NFVAYIS-------------- 256 (279) T ss_pred HHhhcCCchhhccc------cCchhhhhhHHHhhHHHHHHHhcccccc----hhh----hhhhhhe-------------- Confidence 99999999999853 5678899999999999999997765421 111 1111111 Q ss_pred HHHHHhCCCCCHHHHHHHhCCCCCCCcc Q lcl|Aclame:pro 366 YRTGIQGGFLKPNEARSKEDLPPEAGGD 393 (429) Q Consensus 366 ~~~~~~~g~~t~NE~R~~~Gl~~~~~gD 393 (429) +-...|.+ |-.-.+.+-+|+.. | T Consensus 257 --tta~gg~~--~s~~~~~~~~~~~~-~ 279 (279) T protein:vir:40 257 --TTAKGGAI--ESKSSKRDSEPVGN-D 279 (279) T ss_pred --ecccCccc--ccccccccCCCCCC-C Confidence 11122322 22222233344422 2 No 204 >protein:vir:78227 Length: 480 # NCBI annotation: gp11 # Family: family:all:524 # MgeID: mge:1849 # MgeName: Bethlehem # Cross-refs: genbank:acc:YP_001491663;genbank:gi:157786487;genbank:GeneID:5625705 Probab=98.23 E-value=2.3e-06 Score=51.45 Aligned_cols=399 Identities=10% Similarity=-0.004 Sum_probs=167.0 Q ss_pred Cchhhh----hhcccccccccccccCCchHHHHHhhcCCC----Ccceechhh-h--hccHHHHHHHHHHHHhhccCceE Q lcl|Aclame:pro 1 MDSVKK----FFNFEKRQTSQVIELNKDDEKLLEWLGISP----STISVKGKN-A--LKVATVFACIKILSESVSKLPLK 69 (429) Q Consensus 1 Mg~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~-a--~~~~~v~~~i~~ia~~ia~~~~~ 69 (429) |+--.- +.....+.... ...+-+..-... ....+..+- . ........+|+..++.+--..|. T Consensus 1 ~~t~~~~i~~L~~~~~~~~~r-------~~~l~~Yy~G~~~i~~~~~~~~~~~~~~~~~~n~~~~ivd~~~~~l~~~g~~ 73 (480) T protein:vir:78 1 MTTYHEHVERLQGLLARDLPN-------LLEAEAYRNGTRRLKTIGIGAPPELAYLDVQPGWVATYLRTLSDRLDIEGFR 73 (480) T ss_pred CCCHHHHHHHHHHHHHHHHHH-------HHHHHHHHhccccccccccccchhHhhhhhhcchHHHHHHHHHhhhccCcee Confidence 554322 21111000000 000000000000 000011100 0 11233455666666655333332 Q ss_pred EEecCCceeeeeecchhhhhhcccCcCCCCHHHHHHHHHHHHHhhCCeEEEEeeC------CCCceEEEEeeCCcceEEE Q lcl|Aclame:pro 70 IYQEDEYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFD------RKGKVQALWPIDASKVTVY 143 (429) Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~l~~~PN~~~s~~~~~~~~~~~~l~~G~~~~~~~~~------~~g~~~~l~~l~p~~v~~~ 143 (429) + .++. .....+..+++. | ........+..+++.+|.||+++.+. ..|.+ .+.+++|..+.++ T Consensus 74 ~---~~d~---~~~~~l~~i~~~--N---~~d~~~~~~~~~a~~~G~ay~~v~~~~~~~~d~~g~~-~i~~~~p~~~~~~ 141 (480) T protein:vir:78 74 I---SEDS---EGLEELWNWWQA--N---DLDEESVLGHDDSLTFGRSYITVSHPDVESGDPAGIP-LIRVESPLYMYAE 141 (480) T ss_pred c---CCCc---hhHHHHHHHHHh--c---CHHHHHHHHHHHHhhcCceEEEEecCccccCCCCCee-EEEEEcccceEEE Confidence 2 2211 112234444432 2 33567778889999999999888753 34443 4778889998888 Q ss_pred EcCCcc--eeeeeeEEEeecccC-----------ceEE---------------------EccceEEEeecCCCCCccccc Q lcl|Aclame:pro 144 IDDVGL--LNSKTKMWYVVNTGG-----------QQRV---------------------LKPEEILHFKNGITLDGLVGV 189 (429) Q Consensus 144 ~~~~~~--~~~~~~~~~~~~~~g-----------~~~~---------------------~~~~evih~~~~~~~~~~~G~ 189 (429) ++.... .......++.....+ .... +..-.|++|.+.......+|. T Consensus 142 ~D~~~~~~~~~~i~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~vPvv~f~n~~~~~~~~G~ 221 (480) T protein:vir:78 142 LDPRNTRRVTRAVRLYTTRDDVAVPDRATLYLPDETVPLRRNGGLNDQWVVDGDVIKHGLGVVPVVPLTNDPRLGNRYGR 221 (480) T ss_pred EcCCCccceEEEEEEEEeecCCCceEEEEEEeCCeEEEEEecCCCccccccccccccCCCCCcceEEeecccccCCccCc Confidence 764311 111010000000000 0000 122246777655455566788 Q ss_pred CHHHH-HHHHHHHHHHHHHHHHHHHHccCCcceEEEeCCCCCHHHHHHHHHHHHHHhcccccccceeecC-CCceeEecC Q lcl|Aclame:pro 190 PTMEY-LKSTLENSASADKFINNFYKQGLQVKGLVQYVGDLNEDAKKVFRENFESMSSGLQNSHRIALMP-VGYQFQPIS 267 (429) Q Consensus 190 s~~~~-~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~g~~~~~~~~vl~-~g~~~~~~~ 267 (429) |-+.. +...++.............+-.+.|..++.- ....+...+.....|... . +.++.++ ++.++.++. T Consensus 222 s~i~~~v~~l~Da~~~~~s~~~~~~~~~a~p~~~i~G-~~~~~~~~~~~~~~~~~~-~-----~~~~~~~~~~~~~~~~~ 294 (480) T protein:vir:78 222 SEISPELRKVTDAASRTLMNLQSASQILGTPLRVISG-VTTDELTNDGENTTLDIY-Y-----GRILTLASEAAKISEFK 294 (480) T ss_pred ccchhhHHHHHHHHHHHHHHHHHHHHhhcchhhhhhc-CCccccccccccchhhhh-h-----hhhccCCCCCceEEecC Confidence 87653 4445554444444444444444555444431 111111111111112111 1 2234443 457777766 Q ss_pred CChhHHHHHHHHHHHHHHHHHHhcCChhhcCCccccccccHHHHHHHHHHHHHhHHHHHHH----HHHHHh------hcc Q lcl|Aclame:pro 268 LNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKATLNNIEQQQQQFYTDTLQATLTMYE----QEMTYK------LFL 337 (429) Q Consensus 268 ~~~~d~~~~e~~~~~~~~Ia~~fgvp~~~l~~~~~~~~~n~~~~~~~~~~~~l~P~~~~i~----~~l~~~------ll~ 337 (429) ....+. +++..+..+.+|+..=++|+..+++...+ .++.++ . .+....+.-.+...+ ..|.+. +.. T Consensus 295 ~~~~~~-~~~~l~~~i~~~~~~~~~p~~~~g~~~~n-~~Sg~A-l-k~~~~~l~~ka~~~~~~f~~~l~~~~~l~~~~~g 370 (480) T protein:vir:78 295 AAELRN-FAEEMEVFRKEAASITGLPPQYLSSSSEN-PASAEA-I-IATDSRIVKMAERKGRIFGGAWERAMRIAMQIMG 370 (480) T ss_pred ccCHHH-HHHHHHHHHHHHhcccCCChHHhccccCc-chHHHH-H-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC Confidence 543333 67888899999999999999999764321 111111 1 111122222222222 122111 111 Q ss_pred chhhcchhhhhhhhhhHhhhhHHHHHHHHHHHHhCC--CCCHHHHHHHhCCCCCCC--cceeeecccccc---------c Q lcl|Aclame:pro 338 DSELDKGFYSKFNVDAILRADIKTRYEAYRTGIQGG--FLKPNEARSKEDLPPEAG--GDRLLVNGNMLP---------I 404 (429) Q Consensus 338 ~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g--~~t~NE~R~~~Gl~~~~~--gD~~~~~~n~~~---------~ 404 (429) .........+++.+......+..+.++.+.+++.+| +++..-+++.+|+.+.+- .++........+ . T Consensus 371 ~~~~~~~~~i~v~f~~~~~~s~~~~ad~~~kl~~~g~~~~s~et~~~~lg~~~d~~~~~~~~~~e~~~~~~~~~~~~~~~ 450 (480) T protein:vir:78 371 REVTEEYTRLETVWRDPSTPTVAAKADAVSKLYANGQGPIPKEQARIDLGYTATQREQMRDWDKQETEDMIDTLYSTTKA 450 (480) T ss_pred CCccccceeeeEEecCCCCCCHHHHHHHHHHHHHhccccCCHHHHHhcCCCCHhHHHHHHHHHHHHHHHHHHHhhccccc Confidence 000011112222233334567778888888888866 677777888899876431 111100000000 0 Q ss_pred cccccccCCCCCCCCCC-CCCCCCCC Q lcl|Aclame:pro 405 DMAGQAYLKGGDTNGEV-SKEGNEGN 429 (429) Q Consensus 405 ~~~~~~~~~~g~~~~~~-~~~~~~~n 429 (429) +....+....|+..++. +..++.+- T Consensus 451 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 476 (480) T protein:vir:78 451 QADATPKPTVTETKTETQTSPSGFNR 476 (480) T ss_pred cCCCCCCCCCCCCCCccccccCCCCc Confidence 00000111111111111 11111111 No 205 >protein:vir:94498 Length: 474 # NCBI annotation: ORF007 # Family: family:all:125 # MgeID: mge:1508 # MgeName: 88 # Cross-refs: genbank:acc:YP_240672;genbank:gi:66396340;genbank:GeneID:5133762 Probab=98.21 E-value=2.6e-06 Score=51.22 Aligned_cols=386 Identities=11% Similarity=0.035 Sum_probs=173.6 Q ss_pred Cchhhhhhcccccccccc---cccCCchHHHH------HhhcCCCCcceechhhhhccHHHHHHHHHHHHhhccCceEEE Q lcl|Aclame:pro 1 MDSVKKFFNFEKRQTSQV---IELNKDDEKLL------EWLGISPSTISVKGKNALKVATVFACIKILSESVSKLPLKIY 71 (429) Q Consensus 1 Mg~~~~~~~~~~~~~~~~---~~~~~~~~~~~------~~~~~~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~ 71 (429) =-++.++........... .........+. .+-+......+ ..=+..+....+++..++.+-+-|+.+. T Consensus 29 ~~~i~~~i~~~~~~~~~~~~~~~YY~g~~~i~~~~~~~~~~~~~~~~~~---~~ki~~n~~k~Ivd~~~~~l~g~p~~~~ 105 (474) T protein:vir:94 29 EEMIVRLIDDHRKQLDKITVGQRYYDKDNDIVKQMKKVDVHGNIDYDKP---DWRITTNFHQNLVDQKVSYVASKPVTYS 105 (474) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccccchhcccchhccccccccccC---cceeecchHHHHHHHHHhhhhcCCceec Confidence 011111111000000000 00000000000 00000000000 0001245566678888888888887764 Q ss_pred ecCCceeeeeecchhhhhhcccCcCCCCHHHHHHHHHHHHHhhCCeEEEEeeCCCCceEEEEeeCCcceEEEEcCCccee Q lcl|Aclame:pro 72 QEDEYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVYIDDVGLLN 151 (429) Q Consensus 72 ~~~~~~~~~~~~~~~~~~l~~~PN~~~s~~~~~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~l~p~~v~~~~~~~~~~~ 151 (429) ..+++. ......++. | ........+..+.+.+|.+|+++..+..|.+ .+..++|..+.++.++..... T Consensus 106 ~~d~~~------~~~l~~~~~--n---~~~~~~~e~~~~~~~~G~~~~~~~~d~~~~~-~i~~~~p~~~~~v~d~~~~~~ 173 (474) T protein:vir:94 106 CEDENV------LKVIHDVLD--T---RWDNKLIDILTATSNKGIDWLQVYINENGEM-KLFRVPAEQAIPIWVDKEREE 173 (474) T ss_pred cCcHHH------HHHHHHHHh--c---cHHHHHHHHHHHHhhcCceEEEEEecCCCee-EEEEEcccceEEEEcCCCCCc Confidence 332211 112222322 2 2445566678889999999999999888865 577789999888876532111 Q ss_pred e-eeeEEEeecccCceEEEccce-----------------------------------EEEeecCCCCCcccccCHHHHH Q lcl|Aclame:pro 152 S-KTKMWYVVNTGGQQRVLKPEE-----------------------------------ILHFKNGITLDGLVGVPTMEYL 195 (429) Q Consensus 152 ~-~~~~~~~~~~~g~~~~~~~~e-----------------------------------vih~~~~~~~~~~~G~s~~~~~ 195 (429) . ....+|..........+.+.. |+++++ ...|.|-+..+ T Consensus 174 ~~~~ir~~~~~~~~~~~~yt~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~g~vPvv~~~n-----n~~g~sd~e~v 248 (474) T protein:vir:94 174 LKSFIRYYKFNNEEKVEFWTDTTVTYYVLENGGLIPDYYYGANHVQSHFSNGNWGRVPFIAFKN-----NPEEVSDIWMY 248 (474) T ss_pred eEEEEEEEEecCeEEEEEEeCCeEEEEEEcCCccccccccCcCcccccccccCCCccceEEecC-----CcCCCCcHHHH Confidence 1 111111111111111122222 333331 24688888888 Q ss_pred HHHHHHHHHHHHHHHHHHHccCCcceEEEeCCCCCHHHHHHHHHHHHHHhcccccccceeecCCCceeEecCCChhHHHH Q lcl|Aclame:pro 196 KSTLENSASADKFINNFYKQGLQVKGLVQYVGDLNEDAKKVFRENFESMSSGLQNSHRIALMPVGYQFQPISLNMSDAQF 275 (429) Q Consensus 196 ~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~g~~~~~~~~vl~~g~~~~~~~~~~~d~~~ 275 (429) ...++....+.....+.++..+.|..+++--.. +..+...... ...+++.+++|-+...+........+ T Consensus 249 ~~liDa~n~~~s~~~~~~~~~~~~~lv~~g~~~---~~~~~~~~~~--------~~~~~i~~~~~~~~~~l~~~~~~~~~ 317 (474) T protein:vir:94 249 KSIIDAIDKRLSDAQNMFDESVELIYILKGYEG---EDLEEFMRGL--------KYYKAINVDGDGGVETIQVEVPVSST 317 (474) T ss_pred HHHHHHHHHHHHHHHHHHHHhcCceeeeecCCc---ccchhhhhhh--------hccceeeccCCCceeEEeecCCHHHH Confidence 888887777666666666766777666553221 1111111111 12345666665555554444344445 Q ss_pred HHHHHHHHHHHHHHhcCChhhcC-CccccccccH----------HHHHHHHHHHHHhHHHHHHHHHHHHhhccchhhcch Q lcl|Aclame:pro 276 LENTELTIRQIATAFGIKMHQLN-DLSKATLNNI----------EQQQQQFYTDTLQATLTMYEQEMTYKLFLDSELDKG 344 (429) Q Consensus 276 ~e~~~~~~~~Ia~~fgvp~~~l~-~~~~~~~~n~----------~~~~~~~~~~~l~P~~~~i~~~l~~~ll~~~~~~~~ 344 (429) .+..+.....|...-++|..-.. ..+..++... .+.....+..++..+++.|..-+.. ...... T Consensus 318 ~~~~~~l~~~I~~~s~~p~~~~~~~~~n~Sg~Al~~~~~~l~~k~~~k~~~~~~~l~~~~~li~~~~~~-----~~d~~~ 392 (474) T protein:vir:94 318 KEYIDLMRVYIMEFGQGVDFQTDKFGSAPSGIALKFLYGNLDLKANKLKNKATVAIQELISFIIDFNNL-----KTDVKD 392 (474) T ss_pred HHHHHHHHHHHHHHhCccccCccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-----Ccccce Confidence 66677777888888888753321 1111111111 1122344555555656555543322 112233 Q ss_pred hhhhhhhhhHhhhhHHHHHHHHHHHHhCCCCCHHHHHHHhCCCCCC--Ccceeeecc-ccc-cccccccccCCCCCCCCC Q lcl|Aclame:pro 345 FYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEA--GGDRLLVNG-NML-PIDMAGQAYLKGGDTNGE 420 (429) Q Consensus 345 ~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~Gl~~~~--~gD~~~~~~-n~~-~~~~~~~~~~~~g~~~~~ 420 (429) +.+.|+ .-...+..+.++. +..+|+++..-++++++.-+.+ ..+.+..-. ... ...........++.++.+ T Consensus 393 i~v~f~--~~~p~~~~e~a~~---~~~~g~iS~et~l~~l~~v~D~~~E~eri~~E~~~~~~~~~~~~~~~~~~~~~~~~ 467 (474) T protein:vir:94 393 IEISFN--FNRMMNDAEQSQI---IAQSQYLSRETLVKSSPLVDDYKAELERIEQEQMEYNKQLPNLDDGGADGAQQQEG 467 (474) T ss_pred eeEEec--cCcccCHHHHHHH---HHHcCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHhhccccCCCCCCCcccCCC Confidence 445553 3344555555544 5557999998899988763322 111110000 000 000011111111222222 Q ss_pred CCCCCCC Q lcl|Aclame:pro 421 VSKEGNE 427 (429) Q Consensus 421 ~~~~~~~ 427 (429) .+++.+| T Consensus 468 ~~~~~~e 474 (474) T protein:vir:94 468 SNNKESE 474 (474) T ss_pred CcccccC Confidence 3333333 No 206 >protein:vir:97447 Length: 474 # NCBI annotation: ORF007 # Family: family:all:125 # MgeID: mge:1676 # MgeName: 92 # Cross-refs: genbank:acc:YP_240744;genbank:gi:66396413;genbank:GeneID:5133803 Probab=98.21 E-value=2.6e-06 Score=51.22 Aligned_cols=386 Identities=11% Similarity=0.035 Sum_probs=173.6 Q ss_pred Cchhhhhhcccccccccc---cccCCchHHHH------HhhcCCCCcceechhhhhccHHHHHHHHHHHHhhccCceEEE Q lcl|Aclame:pro 1 MDSVKKFFNFEKRQTSQV---IELNKDDEKLL------EWLGISPSTISVKGKNALKVATVFACIKILSESVSKLPLKIY 71 (429) Q Consensus 1 Mg~~~~~~~~~~~~~~~~---~~~~~~~~~~~------~~~~~~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~ 71 (429) =-++.++........... .........+. .+-+......+ ..=+..+....+++..++.+-+-|+.+. T Consensus 29 ~~~i~~~i~~~~~~~~~~~~~~~YY~g~~~i~~~~~~~~~~~~~~~~~~---~~ki~~n~~k~Ivd~~~~~l~g~p~~~~ 105 (474) T protein:vir:97 29 EEMIVRLIDDHRKQLDKITVGQRYYDKDNDIVKQMKKVDVHGNIDYDKP---DWRITTNFHQNLVDQKVSYVASKPVTYS 105 (474) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccccchhcccchhccccccccccC---cceeecchHHHHHHHHHhhhhcCCceec Confidence 011111111000000000 00000000000 00000000000 0001245566678888888888887764 Q ss_pred ecCCceeeeeecchhhhhhcccCcCCCCHHHHHHHHHHHHHhhCCeEEEEeeCCCCceEEEEeeCCcceEEEEcCCccee Q lcl|Aclame:pro 72 QEDEYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVYIDDVGLLN 151 (429) Q Consensus 72 ~~~~~~~~~~~~~~~~~~l~~~PN~~~s~~~~~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~l~p~~v~~~~~~~~~~~ 151 (429) ..+++. ......++. | ........+..+.+.+|.+|+++..+..|.+ .+..++|..+.++.++..... T Consensus 106 ~~d~~~------~~~l~~~~~--n---~~~~~~~e~~~~~~~~G~~~~~~~~d~~~~~-~i~~~~p~~~~~v~d~~~~~~ 173 (474) T protein:vir:97 106 CEDENV------LKVIHDVLD--T---RWDNKLIDILTATSNKGIDWLQVYINENGEM-KLFRVPAEQAIPIWVDKEREE 173 (474) T ss_pred cCcHHH------HHHHHHHHh--c---cHHHHHHHHHHHHhhcCceEEEEEecCCCee-EEEEEcccceEEEEcCCCCCc Confidence 332211 112222322 2 2445566678889999999999999888865 577789999888876532111 Q ss_pred e-eeeEEEeecccCceEEEccce-----------------------------------EEEeecCCCCCcccccCHHHHH Q lcl|Aclame:pro 152 S-KTKMWYVVNTGGQQRVLKPEE-----------------------------------ILHFKNGITLDGLVGVPTMEYL 195 (429) Q Consensus 152 ~-~~~~~~~~~~~g~~~~~~~~e-----------------------------------vih~~~~~~~~~~~G~s~~~~~ 195 (429) . ....+|..........+.+.. |+++++ ...|.|-+..+ T Consensus 174 ~~~~ir~~~~~~~~~~~~yt~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~g~vPvv~~~n-----n~~g~sd~e~v 248 (474) T protein:vir:97 174 LKSFIRYYKFNNEEKVEFWTDTTVTYYVLENGGLIPDYYYGANHVQSHFSNGNWGRVPFIAFKN-----NPEEVSDIWMY 248 (474) T ss_pred eEEEEEEEEecCeEEEEEEeCCeEEEEEEcCCccccccccCcCcccccccccCCCccceEEecC-----CcCCCCcHHHH Confidence 1 111111111111111122222 333331 24688888888 Q ss_pred HHHHHHHHHHHHHHHHHHHccCCcceEEEeCCCCCHHHHHHHHHHHHHHhcccccccceeecCCCceeEecCCChhHHHH Q lcl|Aclame:pro 196 KSTLENSASADKFINNFYKQGLQVKGLVQYVGDLNEDAKKVFRENFESMSSGLQNSHRIALMPVGYQFQPISLNMSDAQF 275 (429) Q Consensus 196 ~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~g~~~~~~~~vl~~g~~~~~~~~~~~d~~~ 275 (429) ...++....+.....+.++..+.|..+++--.. +..+...... ...+++.+++|-+...+........+ T Consensus 249 ~~liDa~n~~~s~~~~~~~~~~~~~lv~~g~~~---~~~~~~~~~~--------~~~~~i~~~~~~~~~~l~~~~~~~~~ 317 (474) T protein:vir:97 249 KSIIDAIDKRLSDAQNMFDESVELIYILKGYEG---EDLEEFMRGL--------KYYKAINVDGDGGVETIQVEVPVSST 317 (474) T ss_pred HHHHHHHHHHHHHHHHHHHHhcCceeeeecCCc---ccchhhhhhh--------hccceeeccCCCceeEEeecCCHHHH Confidence 888887777666666666766777666553221 1111111111 12345666665555554444344445 Q ss_pred HHHHHHHHHHHHHHhcCChhhcC-CccccccccH----------HHHHHHHHHHHHhHHHHHHHHHHHHhhccchhhcch Q lcl|Aclame:pro 276 LENTELTIRQIATAFGIKMHQLN-DLSKATLNNI----------EQQQQQFYTDTLQATLTMYEQEMTYKLFLDSELDKG 344 (429) Q Consensus 276 ~e~~~~~~~~Ia~~fgvp~~~l~-~~~~~~~~n~----------~~~~~~~~~~~l~P~~~~i~~~l~~~ll~~~~~~~~ 344 (429) .+..+.....|...-++|..-.. ..+..++... .+.....+..++..+++.|..-+.. ...... T Consensus 318 ~~~~~~l~~~I~~~s~~p~~~~~~~~~n~Sg~Al~~~~~~l~~k~~~k~~~~~~~l~~~~~li~~~~~~-----~~d~~~ 392 (474) T protein:vir:97 318 KEYIDLMRVYIMEFGQGVDFQTDKFGSAPSGIALKFLYGNLDLKANKLKNKATVAIQELISFIIDFNNL-----KTDVKD 392 (474) T ss_pred HHHHHHHHHHHHHHhCccccCccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-----Ccccce Confidence 66677777888888888753321 1111111111 1122344555555656555543322 112233 Q ss_pred hhhhhhhhhHhhhhHHHHHHHHHHHHhCCCCCHHHHHHHhCCCCCC--Ccceeeecc-ccc-cccccccccCCCCCCCCC Q lcl|Aclame:pro 345 FYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEA--GGDRLLVNG-NML-PIDMAGQAYLKGGDTNGE 420 (429) Q Consensus 345 ~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~Gl~~~~--~gD~~~~~~-n~~-~~~~~~~~~~~~g~~~~~ 420 (429) +.+.|+ .-...+..+.++. +..+|+++..-++++++.-+.+ ..+.+..-. ... ...........++.++.+ T Consensus 393 i~v~f~--~~~p~~~~e~a~~---~~~~g~iS~et~l~~l~~v~D~~~E~eri~~E~~~~~~~~~~~~~~~~~~~~~~~~ 467 (474) T protein:vir:97 393 IEISFN--FNRMMNDAEQSQI---IAQSQYLSRETLVKSSPLVDDYKAELERIEQEQMEYNKQLPNLDDGGADGAQQQEG 467 (474) T ss_pred eeEEec--cCcccCHHHHHHH---HHHcCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHhhccccCCCCCCCcccCCC Confidence 445553 3344555555544 5557999998899988763322 111110000 000 000011111111222222 Q ss_pred CCCCCCC Q lcl|Aclame:pro 421 VSKEGNE 427 (429) Q Consensus 421 ~~~~~~~ 427 (429) .+++.+| T Consensus 468 ~~~~~~e 474 (474) T protein:vir:97 468 SNNKESE 474 (474) T ss_pred CcccccC Confidence 3333333 No 207 >protein:vir:9751 Length: 422 # NCBI annotation: putative structural protein # Family: family:all:524 # MgeID: mge:175 # MgeName: 315.3 # Cross-refs: genbank:acc:NP_795513;genbank:gi:28876291;genbank:GeneID:1257832 Probab=98.21 E-value=2.6e-06 Score=51.22 Aligned_cols=362 Identities=11% Similarity=0.066 Sum_probs=160.0 Q ss_pred CchhhhhhcccccccccccccCCchHHHHHhhcCCCC--cceechhhhhc------cHHHHHHHHHHHHhhccCceEEEe Q lcl|Aclame:pro 1 MDSVKKFFNFEKRQTSQVIELNKDDEKLLEWLGISPS--TISVKGKNALK------VATVFACIKILSESVSKLPLKIYQ 72 (429) Q Consensus 1 Mg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~a~~------~~~v~~~i~~ia~~ia~~~~~~~~ 72 (429) |++ +.+.....+.... ...+.++...... ..+......++ .....-+|+.++..+ -|.=++ T Consensus 4 ~~i-~~L~~~~~~~~~r-------~~~~~~yy~g~~~~~~~~~~~p~~~~~~~~~v~nw~~~~Vd~~a~rl---~~~Gf~ 72 (422) T protein:vir:97 4 MGM-GYLRRKLALFKTG-------VDKRYRYYAMDDRDDTRSIVMPNNVREMYRSVLEWTAKGVDSLADRI---IFREFT 72 (422) T ss_pred HHH-HHHHHHHHHHHHH-------HHHHHHHHhcCCChhhcCccccHHHHHHHHhhcchhHHHHHHHHhcc---ccceee Confidence 333 2222211111100 0111111111110 11111111111 122233444444422 122122 Q ss_pred cCCceeeeeecchhhhhhcccCcCCCCHHHHHHHHHHHHHhhCCeEEEEeeCC-CCceEEEEeeCCcceEEEEcCCccee Q lcl|Aclame:pro 73 EDEYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDR-KGKVQALWPIDASKVTVYIDDVGLLN 151 (429) Q Consensus 73 ~~~~~~~~~~~~~~~~~l~~~PN~~~s~~~~~~~~~~~~l~~G~~~~~~~~~~-~g~~~~l~~l~p~~v~~~~~~~~~~~ 151 (429) ..+ ..+...+. + |. .......+..+.+.+|.||+.+..+. .|.+ .+.+++|..+.+.++...... T Consensus 73 ~~d--------~~l~~~w~-~-N~---ld~~~~~~~~~al~~G~sf~~v~~~~~~~~p-~i~~~sp~~~~~i~D~~~~~~ 138 (422) T protein:vir:97 73 NDD--------FNAWEIFK-A-NN---PDIFFDTAIQSALIASCCFVYIMPGAEDGLP-KMQVIEASKATGILDPTTFLL 138 (422) T ss_pred CCc--------hhHHHHHH-h-cC---hHHHHHHHHHHHHHhcceeEEEeeCCCCCee-EEEEechhhEEEEEeCCCCcc Confidence 111 12444443 2 33 24445577889999999999998874 5654 688899999998876532221 Q ss_pred eeeeEEEeecccCceE---EEc---------------------cceEEEeecCCCCCcccccCHH-HHHHHHHHHHHHHH Q lcl|Aclame:pro 152 SKTKMWYVVNTGGQQR---VLK---------------------PEEILHFKNGITLDGLVGVPTM-EYLKSTLENSASAD 206 (429) Q Consensus 152 ~~~~~~~~~~~~g~~~---~~~---------------------~~evih~~~~~~~~~~~G~s~~-~~~~~~i~~~~~~~ 206 (429) .....++....+|... .++ .--|++|.+.......+|.|.+ +.+...++...... T Consensus 139 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~vPvv~~~n~~~~~~~~G~s~I~e~v~~l~da~~r~~ 218 (422) T protein:vir:97 139 TEGYAILESDSNGNPTLEAYFTDKDIWYYPKKGKPYNIKNPTGHPLLVPIIHRPDAVRPFGRSRITKAGMYHQKAAKRTL 218 (422) T ss_pred eeeEEEEEecCCCcEEEEEEEcCceEEEEcCCCccccccCCCCCcceEEecccCCCccccCccccchhHHHHHHHHHHHH Confidence 1111222222222211 111 1126677655455567888865 34444444444333 Q ss_pred HHHHHHHHccCCcceEEE-eCCCCCHHHHHHHHHHHHHHhcccccccceeecC-----CCceeEecCCChhHHHHHHHHH Q lcl|Aclame:pro 207 KFINNFYKQGLQVKGLVQ-YVGDLNEDAKKVFRENFESMSSGLQNSHRIALMP-----VGYQFQPISLNMSDAQFLENTE 280 (429) Q Consensus 207 ~~~~~~~~ng~~~~~~~~-~~~~~~~e~~~~~~~~~~~~~~g~~~~~~~~vl~-----~g~~~~~~~~~~~d~~~~e~~~ 280 (429) -......+-.+.|.-++. .+.+.. ..+.++... ++++.++ ++.++.+++.+.-+ .+++.++ T Consensus 219 ~~~~~~~e~~a~pqr~i~G~d~d~~--~~~~~~~~~----------~~i~~~~~de~~~~~~v~q~~~~~l~-~~~~~l~ 285 (422) T protein:vir:97 219 ERAEVTAEFYSFPQKYVLGMDPDAK--PMEKWRATV----------STLLEISKDEDGDKPTVGQFTTASMA-PFMEHLK 285 (422) T ss_pred HHHHHHHHHhcchhhhhcccCcccc--cCchhhhhh----------hhhhccCCCCCCCcceeeecCCCChh-HHHHHHH Confidence 333333333444443332 222221 111222211 2344443 23567666544333 3889999 Q ss_pred HHHHHHHHHhcCChhhcCCcccc--ccccHHHHHHHHHHHHHhHHHHHHHHHHHHhh------cc----chhhcchhhhh Q lcl|Aclame:pro 281 LTIRQIATAFGIKMHQLNDLSKA--TLNNIEQQQQQFYTDTLQATLTMYEQEMTYKL------FL----DSELDKGFYSK 348 (429) Q Consensus 281 ~~~~~Ia~~fgvp~~~l~~~~~~--~~~n~~~~~~~~~~~~l~P~~~~i~~~l~~~l------l~----~~~~~~~~~~~ 348 (429) ..+..+|..=++|+..||....+ +...+..+...+... +.-..+.+...+.+-+ .. ......+..+. T Consensus 286 ~~~~~~a~~s~lP~~~lg~~~~NpsSa~Ai~a~~~~L~~k-a~~k~~~fg~~l~~~~rla~~~~~~~~~~~~~~~~~~~~ 364 (422) T protein:vir:97 286 MYASLFAGGSGLTLDDLGFPSDNPSSVESIKAAHENLRAA-GRKAQRSFSSGFLNVAYIAVCLRDEFPYLRNQFMDTVIK 364 (422) T ss_pred HHHHHHhcccCCCHHHhccccCchhHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhcCCcccchhhccceEE Confidence 99999999999999999875532 111222222222111 1111222222222110 00 01111122333 Q ss_pred hhhhhHhhhh---HHHHHHHHHHHHhC--CCCCHHHHHHHhCCCCCCCcceeeeccccccccccccccCCC Q lcl|Aclame:pro 349 FNVDAILRAD---IKTRYEAYRTGIQG--GFLKPNEARSKEDLPPEAGGDRLLVNGNMLPIDMAGQAYLKG 414 (429) Q Consensus 349 fd~~~l~~~d---~~~~~~~~~~~~~~--g~~t~NE~R~~~Gl~~~~~gD~~~~~~n~~~~~~~~~~~~~~ 414 (429) | ......+ ....+.++.|++++ |++..+-+++++|+...+.. +....+....| T Consensus 365 w--~p~~~~~~~s~a~~aDa~~Kl~~a~~~~~~~~~~~~~lg~~~~~~~-----------~~~~~~~~~d~ 422 (422) T protein:vir:97 365 W--EPLFEADANMLTLVGDGAIKLNQAIPGFMDADVIRDLTGVKGADKP-----------IPAITEVTTDG 422 (422) T ss_pred E--ccCCCCChHHHHHHHHHHHHHHhhccccccHHHHHHHcCCCchhHH-----------HHHHHhhhccC Confidence 4 2222334 55666777888888 78888999999999543210 00000000111 No 208 >protein:vir:97336 Length: 492 # NCBI annotation: ORF006 # Family: family:all:125 # MgeID: mge:1666 # MgeName: 52A # Cross-refs: genbank:acc:YP_240606;genbank:gi:66396273;genbank:GeneID:5133692 Probab=98.20 E-value=2.8e-06 Score=51.05 Aligned_cols=388 Identities=8% Similarity=0.031 Sum_probs=178.8 Q ss_pred Cch----hhhhhcccccccccccccCCchHHHHHhh-c------CCCC---cceec---hhhhhccHHHHHHHHHHHHhh Q lcl|Aclame:pro 1 MDS----VKKFFNFEKRQTSQVIELNKDDEKLLEWL-G------ISPS---TISVK---GKNALKVATVFACIKILSESV 63 (429) Q Consensus 1 Mg~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~------~~~~---~~~~~---~~~a~~~~~v~~~i~~ia~~i 63 (429) +-+ +.++.......... ...+.+.. | .... ..... +..=+.++....+|+..+..+ T Consensus 42 ~~~~~~~i~~~i~~~~~~~~r-------~~~l~~YY~g~~~i~~~~~~~~~~~~~~~~~~~~ri~~n~~k~Ivd~~~~yl 114 (492) T protein:vir:97 42 PETLEEMIVRYIKQHLEKLPE-------ISIGQEYYEQRPDIVKEPKPVDATGAVDPLKPDDRMITNFHANLVDQKVSYI 114 (492) T ss_pred hhhHHHHHHHHHHHHHHHHHH-------HHHHHHHhcccCccccccccccccccccccccccccccchHHHHHHHHhhhh Confidence 111 12211100000000 00000000 0 0000 00000 000112456666788888887 Q ss_pred ccCceEEEecCCceeeeeecchhhhhhcccCcCCCCHHHHHHHHHHHHHhhCCeEEEEeeCCCCceEEEEeeCCcceEEE Q lcl|Aclame:pro 64 SKLPLKIYQEDEYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVY 143 (429) Q Consensus 64 a~~~~~~~~~~~~~~~~~~~~~~~~~l~~~PN~~~s~~~~~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~l~p~~v~~~ 143 (429) -+-|+.+...+++. ...+...+ + | ........+..+++.+|.||+++..+.+|.+ .+..++|..+.++ T Consensus 115 ~g~p~~~~~~d~~~-----~~~l~~~~--~-n---~~~~~~~~~~~~~~~~G~a~~~v~~d~dg~~-~~~~~~p~~~~~i 182 (492) T protein:vir:97 115 VGKPIAFKHTDDEV-----VKRIDEVL--G-N---RFDDKLHSVLTGASNKGIEWLHPYLDEEGEF-KLFRVPAEQGIPI 182 (492) T ss_pred cccCceeccCchHH-----HHHHHHHH--h-c---cHHHHHHHHHHHHhhcCeEEEEEEecCCCce-EEEEEcccceEEE Confidence 77777664332211 11222222 1 2 2334555678889999999999999888875 5778899999888 Q ss_pred EcCCccee-eeeeEEEeecccCceEEEccceEEEeecC---------------------CCC---------CcccccCHH Q lcl|Aclame:pro 144 IDDVGLLN-SKTKMWYVVNTGGQQRVLKPEEILHFKNG---------------------ITL---------DGLVGVPTM 192 (429) Q Consensus 144 ~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~evih~~~~---------------------~~~---------~~~~G~s~~ 192 (429) .++..... .....+|..........+.+..+.++... ++. +...|.|-+ T Consensus 183 ~d~~~~~~~~~~vr~~~~~~~~~~~~y~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~vPvv~~~nn~~g~sd~ 262 (492) T protein:vir:97 183 WTDKEHEELEAFIRMYKLENETKVEYWDKVTVNYYVYENGSLIPDYSNNLENSKTHFSTGSWGKIPFIPFKNNDLEISDI 262 (492) T ss_pred EcCCCCCceEEEEEEEeeccceeEEEEecCeEEEEEEecCeeeecccccccccccccccCCCCCcceEEecCCCCCCCch Confidence 76432211 11111111111111112233333222100 000 123588888 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHccCCcceEEEeCCCCCHHHHHHHHHHHHHHhcccccccceeecCCCceeEecCCChhH Q lcl|Aclame:pro 193 EYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGDLNEDAKKVFRENFESMSSGLQNSHRIALMPVGYQFQPISLNMSD 272 (429) Q Consensus 193 ~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~g~~~~~~~~vl~~g~~~~~~~~~~~d 272 (429) +.+...++....+.....+.++..+.|-.+++-- ..++....+..+ . ..+++.++++.+...+...... T Consensus 263 e~v~~liDa~d~~~S~~~~~~~~~~~~~l~~~g~---~~~~~~~~~~~~----~----~~~~~~~~~~~~~~~l~~~~~~ 331 (492) T protein:vir:97 263 FMYKTLIDAYNRRLSDLSNTFKDSNELTYVLKNY---DDQELPEFKRLL----R----YYGAIKVSDNGGVDTIQVEVPV 331 (492) T ss_pred HhHHHHHHHHHHHHHHHHHHHHHhccceeeeecC---CcccchhHHHHH----h----hccceecCCCCcceeEeccCCH Confidence 8888888877777666677777777776665532 222222222211 1 1224445555444444433344 Q ss_pred HHHHHHHHHHHHHHHHHhcCChhhcCCc-cccccccHH----------HHHHHHHHHHHhHHHHHHHHHHHHhhccchhh Q lcl|Aclame:pro 273 AQFLENTELTIRQIATAFGIKMHQLNDL-SKATLNNIE----------QQQQQFYTDTLQATLTMYEQEMTYKLFLDSEL 341 (429) Q Consensus 273 ~~~~e~~~~~~~~Ia~~fgvp~~~l~~~-~~~~~~n~~----------~~~~~~~~~~l~P~~~~i~~~l~~~ll~~~~~ 341 (429) ..+....+...+.|+..-++|....... +..++...+ +.....+...+..+++.|...+.. ... T Consensus 332 ~~~~~~~~~L~~~I~~~s~~p~~~~~~~~~n~Sg~Al~~~~~~l~~ka~~~~~~f~~~l~~~~~li~~~~~~-----~~~ 406 (492) T protein:vir:97 332 ENSKKYLDELYQKIMLFGQAVDFSSDKFGSAPSGVALEFLYTNLNLKADKLARKAKVAIQELLWFVFEHFDI-----KGE 406 (492) T ss_pred HHHHHHHHHHHHHHHHHhCCCCCCccccccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-----Ccc Confidence 5566777888888888888876443221 111111111 122333444555555555543322 111 Q ss_pred cchhhhhhhhhhHhhhhHHHHHHHHHHHHhCCCCCHHHHHHHhCCCCCC--Ccceeeeccc--cccccccccccCCCCCC Q lcl|Aclame:pro 342 DKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEA--GGDRLLVNGN--MLPIDMAGQAYLKGGDT 417 (429) Q Consensus 342 ~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~Gl~~~~--~gD~~~~~~n--~~~~~~~~~~~~~~g~~ 417 (429) ...+.+.| ..-+..+..+.++.+.++ +|+++..-+.+++++-+.+ ..+.+..-.. ..............+.+ T Consensus 407 ~~~i~v~f--~~~~p~~~~e~a~~~~kl--~G~iS~et~l~~l~~v~d~~~Eleri~~E~~~~~~~~~~~~~~~~~~~~~ 482 (492) T protein:vir:97 407 HKDVDISF--NYNKVANTELQVQTAQQS--MGIVSHETVLENHPFVEDLQAELERIEQEQTEYNKQLPNLDDGGADSAQQ 482 (492) T ss_pred cceeeEEe--cCCCCCCHHHHHHHHHHH--hccCchHHHHHhCCCCCCHHHHHHHHHHHHHHHHHhhhccccCCCCCCcc Confidence 22334444 555678888889988887 5889988888888764432 1111100000 00000001111111111 Q ss_pred CCCCCCCCCC Q lcl|Aclame:pro 418 NGEVSKEGNE 427 (429) Q Consensus 418 ~~~~~~~~~~ 427 (429) ..+++++.+| T Consensus 483 ~~~~~~~~~e 492 (492) T protein:vir:97 483 QERSNNKESE 492 (492) T ss_pred cccccccccC Confidence 2222222222 No 209 >protein:vir:9871 Length: 429 # NCBI annotation: hypothetical protein # Family: family:all:125 # MgeID: mge:177 # MgeName: 315.5 # Cross-refs: genbank:acc:NP_795633;genbank:gi:28876408;genbank:GeneID:1257942 Probab=98.03 E-value=6.5e-06 Score=49.01 Aligned_cols=383 Identities=13% Similarity=0.081 Sum_probs=174.5 Q ss_pred Cch--hhhhhccccccccccc---ccCCchHHHHHhhcCCCCcceechhhhhccHHHHHHHHHHHHhhccCceEEEecCC Q lcl|Aclame:pro 1 MDS--VKKFFNFEKRQTSQVI---ELNKDDEKLLEWLGISPSTISVKGKNALKVATVFACIKILSESVSKLPLKIYQEDE 75 (429) Q Consensus 1 Mg~--~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~ 75 (429) |.. +.++.+.......... ....... ..+...... ..-...-+.++....+|+..++.+-+-|+.+...++ T Consensus 1 l~~~~l~~~i~~~~~~~~r~~~l~~yy~g~~---~il~~~~~~-~~~~~~ki~~n~~~~ivd~~~~~l~g~~~~~~~~~~ 76 (429) T protein:vir:98 1 MTKDLLSELIQKHRSFNLSYSAYKQLYEGDH---AILQQKQKE-QYKPDNRLVVNFAKYIVDTFNGYFIGVPVQTSHENK 76 (429) T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHhcccc---ccccccccc-cCCCcceeecchHHHHHHHHhhhhcccCceeecCCh Confidence 111 1111110000000000 0000000 000000000 000001123466677888888888777777643222 Q ss_pred ceeeeeecchhhhhhcccCcCCCCHHHHHHHHHHHHHhhCCeEEEEeeCCCCceEEEEeeCCcceEEEEcCCcceeeeee Q lcl|Aclame:pro 76 YGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVYIDDVGLLNSKTK 155 (429) Q Consensus 76 ~~~~~~~~~~~~~~l~~~PN~~~s~~~~~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~l~p~~v~~~~~~~~~~~~~~~ 155 (429) . ....+..++. . | ........+..+++.+|.+|+++..+.+|.+ .+..++|..+.+..++......... T Consensus 77 ~-----~~~~l~~~~~-~-n---~~~~~~~~~~~~~~~~G~~~~~v~~d~~g~~-~~~~~~p~~~~~v~dd~~~~~~~~~ 145 (429) T protein:vir:98 77 Q-----VSNYLELLDG-Y-N---DQDDNNAELSKICSIYGHGYELVFNDENAEA-GITYLTPLEAFIVYDDSIRQKPLFA 145 (429) T ss_pred H-----HHHHHHHHHh-h-c---CHhHHHHHHHHHHhhcCeEEEEEEecCCCcE-EEEEEcccceEEEEeCCCCCceEEE Confidence 1 1112333332 2 2 3446677888999999999999999888875 5777888888877765322111111 Q ss_pred EEEeecccCceE-E-Ecc-------------------------ceEEEeecCCCCCcccccCHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 156 MWYVVNTGGQQR-V-LKP-------------------------EEILHFKNGITLDGLVGVPTMEYLKSTLENSASADKF 208 (429) Q Consensus 156 ~~~~~~~~g~~~-~-~~~-------------------------~evih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~ 208 (429) ..++...++... . +.. -.|+++++ ...|.|-+..+...++....+... T Consensus 146 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~vPvv~~~n-----~~~g~sd~e~v~~liD~~d~~~s~ 220 (429) T protein:vir:98 146 VRYFYNKGGVLEGSYSDASNITYFKDGEKGIEIGESEPHPFDGVPMIEYVE-----NEERQSLLASVVTLINAFNKAISE 220 (429) T ss_pred EEEEEecCceEEEEEEeCceEEEEEecCCceEecccccccCCccceEEecC-----CCCCCCcHHHHHHHHHHHHHHHHH Confidence 111111111111 0 111 12444432 246888888888888877777777 Q ss_pred HHHHHHccCCcceEEEeCCCCCHHHHHHHHHHHHHHhcccccccceeecCC----CceeEecCCChhHHHHHHHHHHHHH Q lcl|Aclame:pro 209 INNFYKQGLQVKGLVQYVGDLNEDAKKVFRENFESMSSGLQNSHRIALMPV----GYQFQPISLNMSDAQFLENTELTIR 284 (429) Q Consensus 209 ~~~~~~ng~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~g~~~~~~~~vl~~----g~~~~~~~~~~~d~~~~e~~~~~~~ 284 (429) ..+..+..+.|-.+++- ...+++....++. .+++.+++ +.+...+........+.+..+...+ T Consensus 221 ~~~~~~~~~~p~~~i~g-~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~ 287 (429) T protein:vir:98 221 KANDVEYFADAYLKILG-AELDDETLKSLRD------------TRIINLKDTDAQQLTVEFLQKPDADATQEHLLDRLEN 287 (429) T ss_pred HHHHHHHhcCceeeeec-CCCCcchhhhHhh------------CceeeccCCCCCCcceeEEeecCCHHHHHHHHHHHHH Confidence 77767777777666653 2233332222111 12333321 1233333333333335566788888 Q ss_pred HHHHHhcCChhhcCCccccccccHHH----------HHHHHHHHHHhHHHHHHHHHHHHhhccchhhcchhhhhhhhhhH Q lcl|Aclame:pro 285 QIATAFGIKMHQLNDLSKATLNNIEQ----------QQQQFYTDTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAI 354 (429) Q Consensus 285 ~Ia~~fgvp~~~l~~~~~~~~~n~~~----------~~~~~~~~~l~P~~~~i~~~l~~~ll~~~~~~~~~~~~fd~~~l 354 (429) .|+..-++|.......+..++...+. .....+...+.-+++.+..-++..- ......+..+.| ... T Consensus 288 ~i~~~s~~p~~~~~~~gn~Sg~Al~~~~~~l~~k~~~~~~~~~~~l~~~~~li~~~~~~~~--~~~d~~~i~v~f--~~~ 363 (429) T protein:vir:98 288 LIFRTAMVANISDESFGTASGIALRYRLQAMDNLAKTKERKFMSGMNRRYKLIASYPTSKI--GPKDWIGIKYKF--TRN 363 (429) T ss_pred HHHHHhCccccCccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCC--CccccccceEEe--CCC Confidence 88888888754332222222111111 1122333334444444443332211 111112233444 556 Q ss_pred hhhhHHHHHHHHHHHHhCCCCCHHHHHHHhCCCCCCCcceeeeccccccccccccccCCCCCCCCCCCCCCCC Q lcl|Aclame:pro 355 LRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEAGGDRLLVNGNMLPIDMAGQAYLKGGDTNGEVSKEGNE 427 (429) Q Consensus 355 ~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~Gl~~~~~gD~~~~~~n~~~~~~~~~~~~~~g~~~~~~~~~~~~ 427 (429) +..|..+.++.+.++ +|+++..-+.++++.-+.|....=.+-.-- .... ....+..+++++.+-.| T Consensus 364 ~p~~~~~~a~~~~kl--~g~is~et~~~~l~~v~d~~~E~~ri~~E~--~~~~---~~~~~~~~~~~~~~~~~ 429 (429) T protein:vir:98 364 LPANLLEESQIAGNL--AGIVSEETQVGVLSIVENPQKEIERKNSDK--STLI---SRQAGGLNGQNTTTILE 429 (429) T ss_pred CCcCHHHHHHHHHHH--hccCchHHHHHhCCCCCCHHHHHHHHHHHH--HHHH---HHHHhhhcCCCCCCCCC Confidence 778888999988887 688998778888876443211100000000 0000 00111112221111111 No 210 >protein:vir:9568 Length: 410 # NCBI annotation: gp34 # Family: family:all:524 # MgeID: mge:171 # MgeName: SM1 # Cross-refs: genbank:acc:NP_862873;genbank:gi:32469465;genbank:GeneID:1461310 Probab=98.00 E-value=7.5e-06 Score=48.69 Aligned_cols=353 Identities=10% Similarity=0.084 Sum_probs=157.0 Q ss_pred CchhhhhhcccccccccccccCCchHHHHHhhcCCCC--cceechhhhh------ccHHHHHHHHHHHHhhccCceEEEe Q lcl|Aclame:pro 1 MDSVKKFFNFEKRQTSQVIELNKDDEKLLEWLGISPS--TISVKGKNAL------KVATVFACIKILSESVSKLPLKIYQ 72 (429) Q Consensus 1 Mg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~a~------~~~~v~~~i~~ia~~ia~~~~~~~~ 72 (429) |..... + ...+.++...... ..+++....+ -.....-+|+.++..+- |.=++ T Consensus 1 l~~~~~------r-----------~~~~~~yY~g~~~~~~~~~~~p~~~~~~~~~v~nw~~~~Vds~a~rl~---~~Gf~ 60 (410) T protein:vir:95 1 MNLYQS------R-----------VNLRYKHYAMQHYEAPTGITIPAHIRAKYQAVLGWAAKGVDSLADRLI---FRAFA 60 (410) T ss_pred CCcchh------h-----------HHHHHHHhcCCCCccccchhccHHHHhHHHhhcchhHHHHHHhHhhhc---ccccc Confidence 222110 0 0000111111110 0111100111 11223334444444322 22222 Q ss_pred cCCceeeeeecchhhhhhcccCcCCCCHHHHHHHHHHHHHhhCCeEEEEeeCCCCceEEEEeeCCcceEEEEcCCcceee Q lcl|Aclame:pro 73 EDEYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVYIDDVGLLNS 152 (429) Q Consensus 73 ~~~~~~~~~~~~~~~~~l~~~PN~~~s~~~~~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~l~p~~v~~~~~~~~~~~~ 152 (429) ..+ ..+...+. - -+.......+..+.+.+|.||+.+..+.+|.+ .+.+++|..+.+.++....... T Consensus 61 ~~d--------~~l~~i~~--~---N~ld~~~~~~~~~al~~G~sf~~v~~~~d~~~-~i~~~sP~~~~~i~Dp~~~~~~ 126 (410) T protein:vir:95 61 NDD--------FNVTEIFD--R---NNPDIFFDSAILSALIGSCSFVYISKGEDDEV-RLQVIESSNATGVIDPITGLLV 126 (410) T ss_pred CCC--------chHHHHHh--h---cChHHHHHHHHHHHHHhCceeEEEecCCCCce-EEEEEcccceEEEEeCCCCceE Confidence 111 12444332 1 23344556778899999999999988888875 6888999999888875321111 Q ss_pred eeeEEEeecccCce---EEEccc---------------------eEEEeecCCCCCcccccCH----HHHHHHHHHHHHH Q lcl|Aclame:pro 153 KTKMWYVVNTGGQQ---RVLKPE---------------------EILHFKNGITLDGLVGVPT----MEYLKSTLENSAS 204 (429) Q Consensus 153 ~~~~~~~~~~~g~~---~~~~~~---------------------evih~~~~~~~~~~~G~s~----~~~~~~~i~~~~~ 204 (429) ....++....++.. ..+.++ -|++|.+.......+|.|- +..+...+..... T Consensus 127 ~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~vPvV~f~n~~~l~~~~G~s~I~~~v~~l~da~~r~~~ 206 (410) T protein:vir:95 127 EGYAVLARDDYNRPTLEAYFEPNATHFIPKDGEPYSVTNETGIPLLVPVIHRPDAVRPFGRSRITRAGMYYQKYAKRTLE 206 (410) T ss_pred EEEEEEEecCCCeEEEEEEEeCCcEEEEeeCCccccccCCCCCcceEEecccccCCccCCccccchhHHHHHHHHHHHHH Confidence 11111111111111 111111 3566664444455678774 3344333333333 Q ss_pred HHHHHHHHHHccCCcceEEE-eCCCCCHHHHHHHHHHHHHHhcccccccceeecCC-----CceeEecCCChhHHHHHHH Q lcl|Aclame:pro 205 ADKFINNFYKQGLQVKGLVQ-YVGDLNEDAKKVFRENFESMSSGLQNSHRIALMPV-----GYQFQPISLNMSDAQFLEN 278 (429) Q Consensus 205 ~~~~~~~~~~ng~~~~~~~~-~~~~~~~e~~~~~~~~~~~~~~g~~~~~~~~vl~~-----g~~~~~~~~~~~d~~~~e~ 278 (429) -......++ +.|.-++. .+.+.+ ..+. |+. ..++++.++. +.++.+++...-+ .+++. T Consensus 207 ~~~~~~e~~---a~pqr~i~G~d~d~~--~~~~----~~~------~~~~i~~~~~~~~~~~~~v~q~~~~~l~-~~~~~ 270 (410) T protein:vir:95 207 RADITAEFY---SWPQKYILGLDPDAE--PMEK----WKA------TVSSLLTISSSDKGVKPSVGQFTTASMS-PFTEQ 270 (410) T ss_pred HHHHHHHHh---cchhheeeccCCCCC--cCch----hhh------hhhhheeccCCCCCCcceEEecCCCChH-HHHHH Confidence 333333443 44543433 222221 1111 222 1133555542 3566666543322 37899 Q ss_pred HHHHHHHHHHHhcCChhhcCCcccc--ccccHHHHHHHHHHHHHhHHHHHHHHHHHHh----hc--cc----hhhcchhh Q lcl|Aclame:pro 279 TELTIRQIATAFGIKMHQLNDLSKA--TLNNIEQQQQQFYTDTLQATLTMYEQEMTYK----LF--LD----SELDKGFY 346 (429) Q Consensus 279 ~~~~~~~Ia~~fgvp~~~l~~~~~~--~~~n~~~~~~~~~~~~l~P~~~~i~~~l~~~----ll--~~----~~~~~~~~ 346 (429) ++..+..+|..=++|+..||....+ +...+..+...+... +.-..+.+...+.+- +. .. +....... T Consensus 271 l~~l~~~~a~~s~lP~~~lg~~~~NpsSa~Al~a~~~~L~~k-a~~k~~~fg~~l~~~~rla~~i~~~~~~~~~~~~~~~ 349 (410) T protein:vir:95 271 LRTAAAGFAGEMGLTLDDLGFVSDNPSSVEAIKASHENLRLA-GRKAQRSLGAGLLNVAYVAACLRDEFRYTRSQFVRTA 349 (410) T ss_pred HHHHHHHHhhhcCCCHHHhccccCchhHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhcCCCCcccccceee Confidence 9999999999999999999865432 111122222111111 111122222222221 10 00 01111122 Q ss_pred hhhhhh-hHhhhhHHHHHHHHHHHHhC--CCCCHHHHHHHhCCCCCCCcceeeeccccccccccccccCCCCC Q lcl|Aclame:pro 347 SKFNVD-AILRADIKTRYEAYRTGIQG--GFLKPNEARSKEDLPPEAGGDRLLVNGNMLPIDMAGQAYLKGGD 416 (429) Q Consensus 347 ~~fd~~-~l~~~d~~~~~~~~~~~~~~--g~~t~NE~R~~~Gl~~~~~gD~~~~~~n~~~~~~~~~~~~~~g~ 416 (429) +.|... +....+....+.++.|++++ |+.+..-+++++|+.+.+-.. ... .+. ...|+ T Consensus 350 v~W~p~~d~~~~s~a~~aDa~~Kl~~a~~g~~~~~~~~~~lg~~~~~~~~----~~~-------~e~-~~~g~ 410 (410) T protein:vir:95 350 VKWEPLFEADANTMTMIGDGVVKLNQALPGYINAETIRDLTGIAGDMSAK----PVV-------SEG-GSNGE 410 (410) T ss_pred EEeeecCCcchhhHHHHHHHHHHHHHhccCCccHHHHHHhcCCChHHHHH----HHH-------HHH-HhCCC Confidence 223100 12233567788888899888 787778899999997542110 000 000 01111 No 211 >protein:vir:733 Length: 453 # NCBI annotation: minor structural protein 1 # Family: family:all:125 # MgeID: mge:14 # MgeName: Tuc2009 # Cross-refs: genbank:acc:NP_108710;genbank:gi:13487832;genbank:GeneID:920851 Probab=97.99 E-value=7.9e-06 Score=48.55 Aligned_cols=399 Identities=14% Similarity=0.043 Sum_probs=179.3 Q ss_pred Cc--------hhhhhhcccccccccc---cccCCchHHHHHhhcCCCCcceechhhhhccHHHHHHHHHHHHhhccCceE Q lcl|Aclame:pro 1 MD--------SVKKFFNFEKRQTSQV---IELNKDDEKLLEWLGISPSTISVKGKNALKVATVFACIKILSESVSKLPLK 69 (429) Q Consensus 1 Mg--------~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~ 69 (429) |. .+.++.+......... .........+ +..... ..--...=+..+.....|+..++.+-+-|+. T Consensus 11 ~~~~~~~~~~~i~~~i~~~~~~~~r~~~~~~yy~g~~~i---~~~~~~-~~~~~~~ki~~n~~~~ivd~~~~~l~g~~~~ 86 (453) T protein:vir:73 11 YSRDEEITDKVVNDFMKKHQEEVERYEYLGNMYKGIMEI---SSQKAK-DSWKPDNRLTNNFAKYIVDTFVGYFNGIPIK 86 (453) T ss_pred ccccccCCHHHHHHHHHHHHHHHHHHHHHHHHhccccch---hcCCCC-CccCccceeecchHHHHHHHhhhhhcccCce Confidence 11 1112111000000000 0000000000 000000 0000000012345566677777777666666 Q ss_pred EEecCCceeeeeecchhhhhhcccCcCCCCHHHHHHHHHHHHHhhCCeEEEEeeCCCCceEEEEeeCCcceEEEEcCCcc Q lcl|Aclame:pro 70 IYQEDEYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVYIDDVGL 149 (429) Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~l~~~PN~~~s~~~~~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~l~p~~v~~~~~~~~~ 149 (429) +...++. ..+.+...+. ..........+..+.+.+|.+|+.+..+.+|.+ .+..++|..+.+..++... T Consensus 87 ~~~~d~~-----~~~~l~~~~~-----~n~~~~~~~~~~~~~~~~G~~~~~v~~d~~~~~-~i~~~~p~~~~~v~dd~~~ 155 (453) T protein:vir:73 87 KTHDDKS-----VLEAMQLFDN-----LNDMEDEESELAKIACVYGRAYELMYQNESTES-EVIYCSPLNVFMVYDDSIK 155 (453) T ss_pred eecCChH-----HHHHHHHHHH-----hcChhHHHHHHHHHHHhcCeEEEEEEeCCCCce-EEEEEcccceEEEEeCCCC Confidence 5432211 1112223232 124455666788999999999999999888876 4667888888877765432 Q ss_pred eeeeeeEEEeecccCce--EEEccceEEEeecC-----------CCC---------CcccccCHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 150 LNSKTKMWYVVNTGGQQ--RVLKPEEILHFKNG-----------ITL---------DGLVGVPTMEYLKSTLENSASADK 207 (429) Q Consensus 150 ~~~~~~~~~~~~~~g~~--~~~~~~evih~~~~-----------~~~---------~~~~G~s~~~~~~~~i~~~~~~~~ 207 (429) ........+....++.. ..+++..++++... ++. +...|.|-++.+...++....+.. T Consensus 156 ~~~~~~i~~~~~~~~~~~~~vyt~~~i~~~~~~~~~~~~~~~~~~~~g~vPvv~~~n~~~g~s~~~~v~~liDa~~~~~S 235 (453) T protein:vir:73 156 QKPLFAVYYGFDEEGNLSGTVYTLLETISITGKAGEVKFGESTYNVYSDLPIVEYNFNEERQSIFEPVHSLINSYNKVTS 235 (453) T ss_pred ceeEEEEEEEEecCceEEEEEEeCCeEEEEEecCCceEEccceeccCCceeEEEecCCCCCCcchhhHHHHHHHHHHHHH Confidence 22212222222233322 12334444333210 100 123677888888888877766666 Q ss_pred HHHHHHHccCCcceEEEeCCCCCHHHHHHHHHHHHHHhcccccccceeecCCCceeEecCCChhHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 208 FINNFYKQGLQVKGLVQYVGDLNEDAKKVFRENFESMSSGLQNSHRIALMPVGYQFQPISLNMSDAQFLENTELTIRQIA 287 (429) Q Consensus 208 ~~~~~~~ng~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~g~~~~~~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia 287 (429) ...+..+..+.|..+++-- ...++....++..-. ........+.....+.+.++..+.....+..+....+.....|+ T Consensus 236 ~~~~~~~~~~~~~l~~~g~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~~~l~~~I~ 313 (453) T protein:vir:73 236 EKANDVEYFSDQYLVFLGA-EVDEEDAKNIKDNRL-INFFDKNSNGQGTNAAKVDVKFLDKPDSDVQTENLLNRLERSIF 313 (453) T ss_pred HHHHHHHHhccceeeeecC-CCCchhhhccccccc-ccccccccccccccccCceeEEeeecCCHHHHHHHHHHHHHHHH Confidence 6666666666676666432 333444443322110 00111122223344455444444444344445677788888888 Q ss_pred HHhcCChhhcCCccccccccHHH----------HHHHHHHHHHhHHHHHHHHHHHHhhccchhhcchhhhhhhhhhHhhh Q lcl|Aclame:pro 288 TAFGIKMHQLNDLSKATLNNIEQ----------QQQQFYTDTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAILRA 357 (429) Q Consensus 288 ~~fgvp~~~l~~~~~~~~~n~~~----------~~~~~~~~~l~P~~~~i~~~l~~~ll~~~~~~~~~~~~fd~~~l~~~ 357 (429) ..-++|..-....+..++...+. .....+...+..+++.+..-++.. .......+..+.| ..-+.. T Consensus 314 ~~s~~p~~~~~~~gn~Sg~Al~~~~~~l~~ka~~~~~~~~~~l~~~~~li~~~~~~~--~~~~~~~~i~v~f--~~~~p~ 389 (453) T protein:vir:73 314 QFTMAANISDENFGNSSGVALAYKLQAMSNLALSFQRKFQSALNRRYSLWSSLSTNA--SNKDAWKDIEYTF--TRNEPK 389 (453) T ss_pred HHhCCcccCcccccCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc--CCccccccceEEe--CCCCCC Confidence 88888753322211122111111 122334444555555444332221 1111122334444 455678 Q ss_pred hHHHHHHHHHHHHhCCCCCHHHHHHHhCCCCCCCcceeeeccccccccccccccCCCCCCCCCCCCCCCCCC Q lcl|Aclame:pro 358 DIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEAGGDRLLVNGNMLPIDMAGQAYLKGGDTNGEVSKEGNEGN 429 (429) Q Consensus 358 d~~~~~~~~~~~~~~g~~t~NE~R~~~Gl~~~~~gD~~~~~~n~~~~~~~~~~~~~~g~~~~~~~~~~~~~n 429 (429) +..+.++.+.++. |+++..-+.+++++-+.+... ...+..-.+...+......-...+...|| T Consensus 390 ~~~~~a~~~~k~~--giis~et~~~~~~~~~d~~~E-------~~ri~~E~~~~~~~~~~~~~~~~~~~~~~ 452 (453) T protein:vir:73 390 DIKEQAETANILK--GITSEETALSVISVIPDVQAE-------MEKIKKKKLLQLSLTRTSNLVRMKQMRGN 452 (453) T ss_pred CHHHHHHHHHHHh--ccCcHHHHHHhCCCCCCHHHH-------HHHHHHHHHHHHHHHHhccCCcchhhhcC Confidence 8999999888885 788887788888764332111 00000000000011111111122222333 No 212 >protein:vir:9922 Length: 489 # NCBI annotation: hypothetical protein # Family: family:all:125 # MgeID: mge:178 # MgeName: 315.6 # Cross-refs: genbank:acc:NP_795684;genbank:gi:28876464;genbank:GeneID:1257980 Probab=97.96 E-value=8.9e-06 Score=48.27 Aligned_cols=394 Identities=10% Similarity=0.037 Sum_probs=166.2 Q ss_pred CchhhhhhcccccccccccccCCchHHHHHhhcCCCCcce----ec---hhhhhccHHHHHHHHHHHHhhccCceEEEec Q lcl|Aclame:pro 1 MDSVKKFFNFEKRQTSQVIELNKDDEKLLEWLGISPSTIS----VK---GKNALKVATVFACIKILSESVSKLPLKIYQE 73 (429) Q Consensus 1 Mg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~---~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~ 73 (429) +.+++++... +..+ ...+.++.-....... .. +..=+..+...-+|+..++.+-.-|+.+... T Consensus 21 ~~~i~~~~~~-~~~r---------~~~~~~yy~g~~~i~~~~~~~~~~~~~~ki~~n~~~~iv~~~~~~l~g~~~~~~~~ 90 (489) T protein:vir:99 21 KNYISRFKAE-QLER---------LKELKRYYLGDNNIKYRPAKTDKYAADNRIASDFAKYITVFEQGYMLGVPVEYKNE 90 (489) T ss_pred HHHHHHHHHH-HHHH---------HHHHHHHhcccCccccccccccccCCcceeecchHHHHHHHHhhhhccCCceeecC Confidence 2222222110 0000 0011111110000000 00 0000224556677888887777777765433 Q ss_pred CCceeeeeecchhhhhhcccCcCCCCHHHHHHHHHHHHHhhCCeEEEEeeC----CCCceEEEEeeCCcceEEEEcCCcc Q lcl|Aclame:pro 74 DEYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFD----RKGKVQALWPIDASKVTVYIDDVGL 149 (429) Q Consensus 74 ~~~~~~~~~~~~~~~~l~~~PN~~~s~~~~~~~~~~~~l~~G~~~~~~~~~----~~g~~~~l~~l~p~~v~~~~~~~~~ 149 (429) ++. ....+..++. . .....+...+..+++.+|.+|..+... ..|+ ..+..++|..+.++.++... T Consensus 91 d~~-----~~~~l~~~~~-~----n~~~~~~~~~~~~~~~~G~~~~~v~~~~~~d~~~~-~~i~~~~p~~~~~v~dd~~~ 159 (489) T protein:vir:99 91 NKD-----LQAAIDLMSV-R----NNEDYHNVKIKTDLSIYGRAYELLTVEKIDDKKTE-VKLYQLPAEQTFVIYDDTYQ 159 (489) T ss_pred Chh-----HHHHHHHHHh-h----cChhHHHHHHHHHHhhCCeEEEEEeeccCcCCCcc-eEEEEEcccceEEEEcCCCC Confidence 221 1122333332 1 234466778889999999999877542 3333 46788888888887764321 Q ss_pred e-eeeeeEEEe-ecccCce----EEEccce----------------------------EEEeecCCCCCcccccCHHHHH Q lcl|Aclame:pro 150 L-NSKTKMWYV-VNTGGQQ----RVLKPEE----------------------------ILHFKNGITLDGLVGVPTMEYL 195 (429) Q Consensus 150 ~-~~~~~~~~~-~~~~g~~----~~~~~~e----------------------------vih~~~~~~~~~~~G~s~~~~~ 195 (429) . ......+|. ....+.. ..+.+.. |+|+++ ...|.|.+... T Consensus 160 ~~~~~~i~~~~~~~~~~~~~~~~~~y~~~~i~~~~~~~~~~~~~~~~~~~~~~~g~vPvv~~~n-----~~~~~s~~~~v 234 (489) T protein:vir:99 160 RNSLMAVHFYDIDYGSGKRKQIIKAYTSDTIYTYEDYNLETKGMRLKDYEGHFFKGVPVNEYAN-----NEERTGAYESV 234 (489) T ss_pred CceEEEEEEEEEecCCCceEEEEEEEeCCcEEEEEecCCCcccceecccccccCCceeEEEeec-----CCCCCCchhhh Confidence 1 111111111 1111110 1122222 344432 23467777766 Q ss_pred HHHHHHHHHHHHHHHHHHHccCCcceEEEeCCCCCHHHHHHHHHHHHHH------hcccccccceeecCCCc-------e Q lcl|Aclame:pro 196 KSTLENSASADKFINNFYKQGLQVKGLVQYVGDLNEDAKKVFRENFESM------SSGLQNSHRIALMPVGY-------Q 262 (429) Q Consensus 196 ~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~~e~~~~~~~~~~~~------~~g~~~~~~~~vl~~g~-------~ 262 (429) ...++....+.....+.....+.+-.+++-. ....+...+....+.-. .......++++.+..+. + T Consensus 235 ~~liDa~d~~~s~~~~~~~~~~~~~l~i~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (489) T protein:vir:99 235 LDNIDAYDLSQSELANFQQDSVNALLVIAGN-AYTGADENDYLDDGRLNPNGRLAISIGFKKAQVLILDDNPNPNGVKPQ 313 (489) T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhhhccC-CcccccchhhhhhcccccccccccccccccceeeeeccccCccccccc Confidence 6666655555444444444444444333321 11111111111111110 01111223344443322 2 Q ss_pred eEecCCChhHHHHHHHHHHHHHHHHHHhcCChhhc-CCccccccccH----------HHHHHHHHHHHHhHHHHHHHHHH Q lcl|Aclame:pro 263 FQPISLNMSDAQFLENTELTIRQIATAFGIKMHQL-NDLSKATLNNI----------EQQQQQFYTDTLQATLTMYEQEM 331 (429) Q Consensus 263 ~~~~~~~~~d~~~~e~~~~~~~~Ia~~fgvp~~~l-~~~~~~~~~n~----------~~~~~~~~~~~l~P~~~~i~~~l 331 (429) ...+........+....+...+.|...-++|.... +..+..++... .+.....+...+.-+++.+...+ T Consensus 314 ~~~l~~~~~~~~~~~~~~~l~~~i~~~s~~p~~~~~~~~~n~Sg~Al~~~~~~l~~k~~~k~~~~~~~l~~~~~li~~~~ 393 (489) T protein:vir:99 314 AYFLKKEYDTAGSEAYKNRLVADILRFTFTPDTQDMKFSGVQSGESMKYKLMASDNYREKQERLFKKGLMRRLRLAANIW 393 (489) T ss_pred eeeeeecCChHHHHHHHHHHHHHHHHHhCCcccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Confidence 22233222333345667778888988888875332 11121121111 12223345555556665555544 Q ss_pred HHhhccc--hhhcchhhhhhhhhhHhhhhHHHHHHHHHHHHhCCCCCHHHHHHHhCCCC--CC--Ccceeeecccccccc Q lcl|Aclame:pro 332 TYKLFLD--SELDKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPP--EA--GGDRLLVNGNMLPID 405 (429) Q Consensus 332 ~~~ll~~--~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~Gl~~--~~--~gD~~~~~~n~~~~~ 405 (429) ...-... ........+.| +.-+..|..+.++.+.++ .|+++...+.++++.=. .+ ....+. .--.... T Consensus 394 ~~~~~~~~~~~~~~~i~v~f--~~~~p~d~~~~~~~~~kl--~giis~et~~~~l~~v~~~d~~~E~~ri~--~E~~~~~ 467 (489) T protein:vir:99 394 AIKGNEATTYSLVNDTSIVF--TPNLPQNDNEIVTAAQNL--YGIVSDQTIFEILNTVTGVDAEAELKRLK--EEADKKQ 467 (489) T ss_pred hhcCCccccccccccceEEe--CCCCCcCHHHHHHHHHHH--hccCCHHHHHHhcCCCCchhHHHHHHHHH--HHHHHHh Confidence 3211110 00111223444 445677888888888887 48899988888875411 11 111110 0000000 Q ss_pred ccccccCCCCCCCCCCCCCCCCC Q lcl|Aclame:pro 406 MAGQAYLKGGDTNGEVSKEGNEG 428 (429) Q Consensus 406 ~~~~~~~~~g~~~~~~~~~~~~~ 428 (429) .. .....+++.+++.+...++. T Consensus 468 ~~-~~~~~~~~~~~~~~~~~~~p 489 (489) T protein:vir:99 468 SL-PEPRLVGDASGQEEPTAEKP 489 (489) T ss_pred cc-ccccccCCCCCCcCCCCCCC Confidence 00 11112233333333333333 No 213 >protein:vir:107112 Length: 478 # NCBI annotation: putative phage portal protein # Family: family:all:125 # MgeID: mge:1571 # MgeName: CNPH82 # Cross-refs: genbank:acc:YP_950601;genbank:gi:119953681;genbank:GeneID:4643121 Probab=97.88 E-value=1.3e-05 Score=47.35 Aligned_cols=385 Identities=8% Similarity=0.033 Sum_probs=169.5 Q ss_pred Cc-----hhhhhhcccccccccccccCCchHHHHHhhcCCCCc-------------ceechhhhhccHHHHHHHHHHHHh Q lcl|Aclame:pro 1 MD-----SVKKFFNFEKRQTSQVIELNKDDEKLLEWLGISPST-------------ISVKGKNALKVATVFACIKILSES 62 (429) Q Consensus 1 Mg-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~a~~~~~v~~~i~~ia~~ 62 (429) .+ ++.++.+....... ....+.++....... ....+..=+.++....+++..+.. T Consensus 23 ~~~~~~~~i~~~i~~~~~~~~-------r~~~~~~Yy~g~~~i~~~~~~~~~~~~~~~~~~~~ki~~n~~k~ivd~~~~y 95 (478) T protein:vir:10 23 KYETQEEMILRLVREHKENID-------NITMGERYYNHHPDILDAPFKRDVNGDYDETKPDWRMYTNYHQNLVDQKVAY 95 (478) T ss_pred ccCChHHHHHHHHHHHHHHHH-------HHHHHHHHhcccccccccchhhhcccccccccccceeccchHHHHHHHHhhh Confidence 11 11111110000000 000000000000000 000000001245667788888888 Q ss_pred hccCceEEEecCCceeeeeecchhhhhhcccCcCCCCHHHHHHHHHHHHHhhCCeEEEEeeCCCCceEEEEeeCCcceEE Q lcl|Aclame:pro 63 VSKLPLKIYQEDEYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTV 142 (429) Q Consensus 63 ia~~~~~~~~~~~~~~~~~~~~~~~~~l~~~PN~~~s~~~~~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~l~p~~v~~ 142 (429) +-+-|+.+...+++. ...+...++ | ........+....+.+|.+|+.+..+..|.+ .+..++|..+.+ T Consensus 96 l~g~p~~~~~~~~~~-----~~~l~~~~~---n---~~~~~~~~~~~~~~~~G~~~~~v~~d~~~~~-~~~~~~p~~~~~ 163 (478) T protein:vir:10 96 AVANPVTFGVDNDKA-----LKQIQHTLN---H---KWDDKLVDILTAASNKGIEWVQPYVDEEGEF-KTFRVPAEQAVP 163 (478) T ss_pred hcccCceeecCChHH-----HHHHHHHHh---c---cHHHHHHHHHHHHhhCCeEEEEEEecCCCce-EEEEEcccceEE Confidence 888887764333211 112333332 2 3456667778899999999999988888875 577788998887 Q ss_pred EEcCCcceee-eeeEEEeecccCceEEEccceEEEeecC-------------------------CC---------CCccc Q lcl|Aclame:pro 143 YIDDVGLLNS-KTKMWYVVNTGGQQRVLKPEEILHFKNG-------------------------IT---------LDGLV 187 (429) Q Consensus 143 ~~~~~~~~~~-~~~~~~~~~~~g~~~~~~~~evih~~~~-------------------------~~---------~~~~~ 187 (429) +.+....... ....+|..........+.++.|.+++.. ++ .+... T Consensus 164 v~d~~~~~~~~~~ir~~~~~~~~~~~~y~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~vPvv~~~n~~~ 243 (478) T protein:vir:10 164 IWTNKERDELQAFIRVYELDGAERVEYWTKDDVTFYELKEGQLIPDFYRSEDHIQPHYYQGNKLMSWGRVPFIPFKNNPQ 243 (478) T ss_pred EEcCCCCCceEEEEEEEeeeCceEEEEEeCCcEEEEEecCCeeeccccccccccccceecccccccCCcceEEEeccCCC Confidence 7764321111 1111111111111112233333322210 00 01235 Q ss_pred ccCHHHHHHHHHHHHHHHHHHHHHHHHccCCcceEEEeCCCCCHHHHHHHHHHHHHHhcccccccceeec--C--CCcee Q lcl|Aclame:pro 188 GVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGDLNEDAKKVFRENFESMSSGLQNSHRIALM--P--VGYQF 263 (429) Q Consensus 188 G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~g~~~~~~~~vl--~--~g~~~ 263 (429) |.|-+..+...++....+.....+.++..+.|-.+++--.. +........+.. .+++.+ + ++++| T Consensus 244 g~sd~e~v~~liDa~~~~~S~~~~~~~~~~~~~~~~~g~~~---~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~ 312 (478) T protein:vir:10 244 EVSDLFMYKTIIDALDKRLSDTQNTFDESVELIYILKGYEG---EDMKDFMHNLKY--------YKAISVAGESGSGVDT 312 (478) T ss_pred CCCcHHHHHHHHHHHHHHHHHHHHHHHHhhCcceeeecCCc---ccccchhhhhhh--------CceeEecCCCCCcceE Confidence 78888888777877776666666666666666555442211 111111111111 122222 2 34555 Q ss_pred EecCCChhHHHHHHHHHHHHHHHHHHhcCChhhcCCc-cccccccHH----------HHHHHHHHHHHhHHHHHHHHHHH Q lcl|Aclame:pro 264 QPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDL-SKATLNNIE----------QQQQQFYTDTLQATLTMYEQEMT 332 (429) Q Consensus 264 ~~~~~~~~d~~~~e~~~~~~~~Ia~~fgvp~~~l~~~-~~~~~~n~~----------~~~~~~~~~~l~P~~~~i~~~l~ 332 (429) .... .....+.+..+.....|+..-++|....... +..++...+ ......+..++.-+++.|...+. T Consensus 313 l~~~--~~~~~~~~~~~~l~~~I~~~s~~p~~~~~~~~~n~Sg~Ai~~~~~~l~~k~~~~~~~~~~~l~~~~~li~~~~~ 390 (478) T protein:vir:10 313 IKVE--VPIDSVKEYTKMLRDYIIEFGQGVDFQQDKFGNSPSGIALKFMYSNLDLKANKLKNKTLTALQELLQYIIDFYR 390 (478) T ss_pred Eeec--CCHHHHHHHHHHHHHHHHHHhCCcCcCccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC Confidence 4443 3444566778888888888888875433211 111111111 11223333444444444443222 Q ss_pred HhhccchhhcchhhhhhhhhhHhhhhHHHHHHHHHHHHhCCCCCHHHHHHHhCCCCCCCcceeeecccccccccccc-cc Q lcl|Aclame:pro 333 YKLFLDSELDKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEAGGDRLLVNGNMLPIDMAGQ-AY 411 (429) Q Consensus 333 ~~ll~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~Gl~~~~~gD~~~~~~n~~~~~~~~~-~~ 411 (429) .........+.| ..-+..+..+.++.+.++ +|+++..-+.++++.-..+....=.+..-- .....+ .. T Consensus 391 -----~~~d~~~i~i~f--~~~~p~~~~e~~~~~~~~--~g~iS~et~i~~~~~v~d~~~E~~ri~~E~--~~~~~~~~~ 459 (478) T protein:vir:10 391 -----LDVRVQDIEITF--NFNVMVNELENSQIAMNS--TGLLSKETILGNHSWVQDPVAEMERIEQEN--IELNQQLPD 459 (478) T ss_pred -----CCcccccceEEe--CCCCCCCHHHHHHHHHHH--hCCCChHHHHHhCCCCCCHHHHHHHHHHHH--HHHHHhccc Confidence 111122334444 444667888888887766 688988778888865322211000000000 000000 11 Q ss_pred CCCCCCCCCCCCCCCCCC Q lcl|Aclame:pro 412 LKGGDTNGEVSKEGNEGN 429 (429) Q Consensus 412 ~~~g~~~~~~~~~~~~~n 429 (429) ..++..+.+ ..++.+++ T Consensus 460 ~~~~~~d~~-~~~~~d~~ 476 (478) T protein:vir:10 460 IEEGLNDEQ-QRQSEDNQ 476 (478) T ss_pred cCCCCcccc-cccCcCCC Confidence 111121111 11111111 No 214 >protein:vir:94546 Length: 506 # NCBI annotation: minor head protein # Family: family:all:125 # MgeID: mge:1510 # MgeName: phiJL-1 # Cross-refs: genbank:acc:YP_223886;genbank:gi:62327098;genbank:GeneID:5075562 Probab=97.81 E-value=1.7e-05 Score=46.67 Aligned_cols=396 Identities=10% Similarity=0.006 Sum_probs=172.2 Q ss_pred CchhhhhhcccccccccccccCCchHHHHHhh-cCCCC------cce--echhhhhccHHHHHHHHHHHHhhccCceEEE Q lcl|Aclame:pro 1 MDSVKKFFNFEKRQTSQVIELNKDDEKLLEWL-GISPS------TIS--VKGKNALKVATVFACIKILSESVSKLPLKIY 71 (429) Q Consensus 1 Mg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~------~~~--~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~ 71 (429) ..++++.....+ ++ ...+.+.. |.... ... .-+..-+..+.....++..+..+-+-|+.+. T Consensus 28 ~~li~~~~~~~~-~r---------~~~l~~YY~g~~~~i~~~~~~~~~~~~~~~ki~~n~~~~Iv~~~~~~l~G~p~~~~ 97 (506) T protein:vir:94 28 MKFITHHFNYQR-PR---------LEMLDDYYQGYNLKILDKQSRRHEDGKADHRATHSFAKYIADFQTSYSVGNPINVK 97 (506) T ss_pred HHHHHHHHHHHH-HH---------HHHHHHHhcCCCccccccccccccccCCcceeecchHHHHHHHhhhhhcccCceee Confidence 222222111000 00 00111111 10000 000 0000112345666777888887777777664 Q ss_pred ecCCceeeeeecchhhhhhcccCcCCCCHHHHHHHHHHHHHhhCCeEEEEeeCCCCceEEEEeeCCcceEEEEcCCccee Q lcl|Aclame:pro 72 QEDEYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVYIDDVGLLN 151 (429) Q Consensus 72 ~~~~~~~~~~~~~~~~~~l~~~PN~~~s~~~~~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~l~p~~v~~~~~~~~~~~ 151 (429) ..++. ....+..++. ..........+...++.+|.+|+++..+.+|.+ .+.+++|..+.++.++..... T Consensus 98 ~~d~~-----~~~~l~~~~~-----~N~~~~~~~~~~~~~~~~G~a~~~v~~ded~~~-~i~~~~p~~~~~v~dd~~~~~ 166 (506) T protein:vir:94 98 LPDDG-----SNSGFDTFNK-----ANDVDAENYDLFLDMSRYGRAYEYVYRGEDNEE-HLAKLDPLDTFVIYSTDVDPK 166 (506) T ss_pred cCcch-----HHHHHHHHHh-----ccCHhHHHHHHHHHHHhcCeEEEEEEecCCCee-EEEEEcccceEEEecCCCCCc Confidence 33221 1122333332 124455667788889999999999999888865 577789999888776532111 Q ss_pred --eeeeEEEeecccCc--------eEEEccce-------------------------EEEeecCCCCCcccccCHHHHHH Q lcl|Aclame:pro 152 --SKTKMWYVVNTGGQ--------QRVLKPEE-------------------------ILHFKNGITLDGLVGVPTMEYLK 196 (429) Q Consensus 152 --~~~~~~~~~~~~g~--------~~~~~~~e-------------------------vih~~~~~~~~~~~G~s~~~~~~ 196 (429) .....+.....++. ...+++.. |+++++ ...|.|.+.... T Consensus 167 ~~~~v~~~~~~~~~~~~~~~~~~~~~~yt~~~~~~~~~~~~~~~~~~~~~~~~g~vPvv~~~n-----~~~~~sd~e~~~ 241 (506) T protein:vir:94 167 PIMAVRYHQIELVDDNQVSTINYVPETWTADTYTLYNPTPIMGKMQVDTTKPITTFPVVEFKN-----SNFRLGDFENVL 241 (506) T ss_pred eEEEEEEEeeeeccCCceeEEEEEEEEEeCceEEEeccccCccceeccccccCCccceEEecC-----CCCCCCchhhhH Confidence 10100100000000 00011111 333332 124666666666 Q ss_pred HHHHHHHHHHHHHHHHHHccCCcceEEEeCC------------------CC---CHHHHHHHHHHHHHH-hcccccccce Q lcl|Aclame:pro 197 STLENSASADKFINNFYKQGLQVKGLVQYVG------------------DL---NEDAKKVFRENFESM-SSGLQNSHRI 254 (429) Q Consensus 197 ~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~------------------~~---~~e~~~~~~~~~~~~-~~g~~~~~~~ 254 (429) ..++....+.....+..+..+.+-.+++-.. .. ..+........+... .-.....+.+ T Consensus 242 ~liDa~d~~~S~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (506) T protein:vir:94 242 PLIDLYDAAQSDTANYMTDLNEAMLIIQGDIDTLFEGSDMMNTIDPNDEDAMAKLAKDKLELIKEMKDANMLLLKSGMTV 321 (506) T ss_pred HHHHHHHHHHHHHHHHHHHhhhHHHHHhcCccccccchhccccccccccccccccccchhHHHhhhhhcCeeeecccccc Confidence 6665555444333333333332322222100 00 011111111111111 1111111112 Q ss_pred eecCCCceeEecCCChhHHHHHHHHHHHHHHHHHHhcCChhhcCC-cccccccc----------HHHHHHHHHHHHHhHH Q lcl|Aclame:pro 255 ALMPVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLND-LSKATLNN----------IEQQQQQFYTDTLQAT 323 (429) Q Consensus 255 ~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~fgvp~~~l~~-~~~~~~~n----------~~~~~~~~~~~~l~P~ 323 (429) ...+.+.++.-+..+.....+....+.....|...-++|...... .+..++.. ........+...+..+ T Consensus 322 ~~~~~~~d~~~l~~~~~~~~~~~~~~~l~~~I~~~s~~p~~~~~~~~~n~Sg~Aik~~~~~l~~k~~~k~~~~~~~l~~~ 401 (506) T protein:vir:94 322 NGTQTSVDAKYINKTYDVVGSEAYKKRVAGDIHKFSHTPDLTDENFASNSSGVAMQYKVLGTVELASTKRRMFERGLYAR 401 (506) T ss_pred cCccccccceeeeecCCHHHHHHHHHHHHHHHHHHhCccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Confidence 222334445445554455556788888899999999998643321 11112111 1122344556666666 Q ss_pred HHHHHHHHHHhhccchhhcchhhhhhhhhhHhhhhHHHHHHHHHHHHhCCCCCHHHHHHHhCCCCCCC--cceeeecccc Q lcl|Aclame:pro 324 LTMYEQEMTYKLFLDSELDKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEAG--GDRLLVNGNM 401 (429) Q Consensus 324 ~~~i~~~l~~~ll~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~Gl~~~~~--gD~~~~~~n~ 401 (429) ++.|...+...--..........+.| ..-+..|..+.++.+.++ +|+++...+++++++-..|. ...+. .-- T Consensus 402 ~~li~~~~~~~~~~~~~d~~~i~i~f--~~~~p~d~~e~a~~~~kl--~g~iS~et~~~~lp~v~d~~~E~~ri~--~E~ 475 (506) T protein:vir:94 402 YQIISDIENSIHGDWTFDPQELTFTF--RDNLPADNISQIKALVQA--GATLPQKYLYQQLPGVTNPQDIVDMMK--EQS 475 (506) T ss_pred HHHHHHHHHhcCCccccccccceEEe--CCCCCcCHHHHHHHHHHH--hccCChHHHHHhCCCCCCHHHHHHHHH--HHH Confidence 66666554421100000111223444 555778899999988887 58999999999886543221 11110 000 Q ss_pred ccccccccccCCCCCCCCCCCCCCCCCC Q lcl|Aclame:pro 402 LPIDMAGQAYLKGGDTNGEVSKEGNEGN 429 (429) Q Consensus 402 ~~~~~~~~~~~~~g~~~~~~~~~~~~~n 429 (429) ....... ..........+.+...++.| T Consensus 476 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 502 (506) T protein:vir:94 476 ANGDYSF-DQNGVISNDGQTNTTATQTD 502 (506) T ss_pred HHHhhcc-hhhcCCCcccCccccccccc Confidence 0000000 00011111222223333333 No 215 >protein:vir:105461 Length: 470 # NCBI annotation: putative phage portal protein # Family: family:all:125 # MgeID: mge:1502 # MgeName: KC5a # Cross-refs: genbank:acc:YP_529871;genbank:gi:90592611;genbank:GeneID:3974525 Probab=97.77 E-value=2e-05 Score=46.29 Aligned_cols=382 Identities=9% Similarity=0.030 Sum_probs=175.3 Q ss_pred Cchhhhhhcccccccccc---cccCCchHHHHH-------hhcCCCCcceechhhhhccHHHHHHHHHHHHhhccCceEE Q lcl|Aclame:pro 1 MDSVKKFFNFEKRQTSQV---IELNKDDEKLLE-------WLGISPSTISVKGKNALKVATVFACIKILSESVSKLPLKI 70 (429) Q Consensus 1 Mg~~~~~~~~~~~~~~~~---~~~~~~~~~~~~-------~~~~~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~ 70 (429) ..+++++..-..+..... .........+.. ..+.......-.+..=+.+......|+..++.+-+-|+.+ T Consensus 7 ~~~i~~~~~~~~~~~~~~~~~~~Yy~g~~~I~~~~~~~~~~~~~~~~~~~~~~~~ki~~n~~k~Iv~~~~~yl~G~p~~~ 86 (470) T protein:vir:10 7 KKLIQNTSTSRNDLINNYKQAVNYYENKTDITTRNNGKAKLNKEGKKDPLRSADNRIPSNFYQLLVDQEAGYVASVFPDI 86 (470) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccccchhccccchhcccccccccccccCCcccccchHHHHHHhhhhheeccceee Confidence 111221111000000000 000000000000 0000000000000001124445566777788887888776 Q ss_pred EecCCceeeeeecchhhhhhcccCcCCCCHHHHHHHHHHHHHhhCCeEEEEeeCCCCceEEEEeeCCcceEEEEcCCcc- Q lcl|Aclame:pro 71 YQEDEYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVYIDDVGL- 149 (429) Q Consensus 71 ~~~~~~~~~~~~~~~~~~~l~~~PN~~~s~~~~~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~l~p~~v~~~~~~~~~- 149 (429) ...+++. ...+...++. ...+-...+..++..+|.+|.++..+..|.+ .+..++|..+-++.++... T Consensus 87 ~~~d~~~-----~~~l~~~~~~------~~~~~~~~l~~~~~~~G~a~~~~y~d~~~~~-~~~~~~p~~~~~v~d~~~~~ 154 (470) T protein:vir:10 87 DVGKDAD-----NKKIIDVLGD------DRALTLNGLLVDSSNAGRAWLHYWIDEDGNF-RYGIIQPDQITPIYATTLDN 154 (470) T ss_pred ecCchHH-----HHHHHHHHhh------hHHHHHHHHHHHHhhcCeeEEEEEecCCCce-EEEEEcccceEEEEcCCCCC Confidence 5443221 1234444431 2344555677888999999999999888875 5777899998888765321 Q ss_pred -eeeeeeEEEeecccCc-e----EEEccce---------------------------------------------EEEee Q lcl|Aclame:pro 150 -LNSKTKMWYVVNTGGQ-Q----RVLKPEE---------------------------------------------ILHFK 178 (429) Q Consensus 150 -~~~~~~~~~~~~~~g~-~----~~~~~~e---------------------------------------------vih~~ 178 (429) .......|......+. . ..+.+.. |++|+ T Consensus 155 ~~~a~ir~y~~~~~~~~~~~~~~e~yt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~vPvv~~~ 234 (470) T protein:vir:10 155 KLLGILRSYKQLDPDSGKYFTVHEYWTDKEAQFFRTNATDSTVIEPYNIITSYDLSAGYETGQSNTLKHNFGRVPFIEFS 234 (470) T ss_pred ceEEEEEEEEeeecCCceEEEEEEEEcCCcEEEEEeecCcceeccccccccccccccccccccccccccCCCeeeEEEee Confidence 1111111111111110 0 1122222 23333 Q ss_pred cCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHHccCCcceEEEeCCCCCHHHHHHHHHHHHHHhcccccccceeec- Q lcl|Aclame:pro 179 NGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGDLNEDAKKVFRENFESMSSGLQNSHRIALM- 257 (429) Q Consensus 179 ~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~g~~~~~~~~vl- 257 (429) + ...|.|-++.....++....+.....+.++..+.|-.+++--...+.++ ....+.. .+++.+ T Consensus 235 n-----n~~g~sd~e~v~~liDa~d~~~S~~~~~~~~~~~~~lvl~g~~~~~~~~---~~~~~~~--------~~~i~~~ 298 (470) T protein:vir:10 235 K-----NKYRLPELNKYKGLIDAYDDIYNGFINDLDDVQTVILVLTNYGGADLHQ---FMNDLRK--------YKSIKIN 298 (470) T ss_pred c-----CCCCCCchhHHHHHHHHHHHHHHHHHHHHHHhcCcceeeecCCccccch---hhhhhhh--------cCeEecc Confidence 2 2358888888888888877777777777777777766665432222111 1222111 112222 Q ss_pred ------CCCceeEecCCChhHHHHHHHHHHHHHHHHHHhcCChhhcCCccccccccH----------HHHHHHHHHHHHh Q lcl|Aclame:pro 258 ------PVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKATLNNI----------EQQQQQFYTDTLQ 321 (429) Q Consensus 258 ------~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~fgvp~~~l~~~~~~~~~n~----------~~~~~~~~~~~l~ 321 (429) +++++|.....+. ..+....+.....|+..-++|..-....+..++... .......++.++. T Consensus 299 ~~~~~~~~~~~~lt~~~~~--~~~~~~~~~L~~~I~~~s~~p~~~~~~~gn~Sg~Alk~~~~~l~~k~~~~~~~~~~~l~ 376 (470) T protein:vir:10 299 NTGNGDNSGVDKLQIDIPV--EARDDALKITRKNIFLFGQGIDPANFESSNASGVAIKMLYSHLELKAAKTQTYFEHAIN 376 (470) T ss_pred CCCCCcCceeEEEeecCCh--HHHHHHHHHHHHHHHHHhCCCCCCccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHH Confidence 2345665544442 334566777788888887777543222222221111 1122344455555 Q ss_pred HHHHHHHHHHHHhhccchhhcchhhhhhhhhhHhhhhHHHHHHHHHHHHhCCCCCHHHHHHHhCCCCCCC--cceeeecc Q lcl|Aclame:pro 322 ATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEAG--GDRLLVNG 399 (429) Q Consensus 322 P~~~~i~~~l~~~ll~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~Gl~~~~~--gD~~~~~~ 399 (429) -+++.|...++.+ . .....+.+.+..-+..|..+.++.+.++ +|+++..-+++++++-..+. ...+-.-. T Consensus 377 ~~~~~i~~~l~~~----~--~d~~~i~i~f~~~~p~d~~e~~~~~~~~--~g~iS~et~l~~~p~v~D~~~E~eri~~E~ 448 (470) T protein:vir:10 377 ELVRAIMRYLNFS----D--ADKRHISQHWTRTKVEDSLTKAQIVSTV--ANYSSKEAVAKANPIVDDWQQELKDLAKDK 448 (470) T ss_pred HHHHHHHHHhccc----C--cccceeeEEeccCCCCCHHHHHHHHHHH--hccCcHHHHHHhCCCCCCHHHHHHHHHHHH Confidence 5555555444321 1 1112344444566788999999988887 68999988888887643221 11100000 Q ss_pred -ccccccccccccCCCCCCCCCC Q lcl|Aclame:pro 400 -NMLPIDMAGQAYLKGGDTNGEV 421 (429) Q Consensus 400 -n~~~~~~~~~~~~~~g~~~~~~ 421 (429) ...+... ......++..++++ T Consensus 449 ~e~~~~~~-~~~~~~~~~~dde~ 470 (470) T protein:vir:10 449 EENDPYSN-QADELNGKGVNDEQ 470 (470) T ss_pred HHHHHhhc-cccccCCCCCCCCC Confidence 0000000 00011111111111 No 216 >protein:vir:96179 Length: 468 # NCBI annotation: ORF007 # Family: family:all:125 # MgeID: mge:1602 # MgeName: 37 # Cross-refs: genbank:acc:YP_240075;genbank:gi:66395736;genbank:GeneID:5133166 Probab=97.74 E-value=2.3e-05 Score=45.97 Aligned_cols=376 Identities=10% Similarity=0.039 Sum_probs=163.2 Q ss_pred Cch--------------hhhhhcccccccccccccCCchHHHHHhhcCCCC-------------cceechhhhhccHHHH Q lcl|Aclame:pro 1 MDS--------------VKKFFNFEKRQTSQVIELNKDDEKLLEWLGISPS-------------TISVKGKNALKVATVF 53 (429) Q Consensus 1 Mg~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~a~~~~~v~ 53 (429) +.. +.++.+...... . .-..+.+..-+... .....+..=+..+... T Consensus 14 ~~~~~~~~~~~~~~~~~i~~~i~~~~~~~----~---~~~~~~~yY~g~~~i~~~~~~~~~~~~~~~~~~~~ki~~n~~~ 86 (468) T protein:vir:96 14 ERVVEQIKPQYETQEEMILRLITKHKENV----E---DITVGERYYNHQPDVLFNAPKRNVKGEIDPFKPDWRMYTNYHQ 86 (468) T ss_pred hheeecccccccCcHHHHHHHHHHHHHHH----H---HHHHHHHHhcCCCccccccccccccccccccccccccccchHH Confidence 000 001100000000 0 00000000000000 0000000112245556 Q ss_pred HHHHHHHHhhccCceEEEecCCceeeeeecchhhhhhcccCcCCCCHHHHHHHHHHHHHhhCCeEEEEeeCCCCceEEEE Q lcl|Aclame:pro 54 ACIKILSESVSKLPLKIYQEDEYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALW 133 (429) Q Consensus 54 ~~i~~ia~~ia~~~~~~~~~~~~~~~~~~~~~~~~~l~~~PN~~~s~~~~~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~ 133 (429) .+++..+..+-+-|+.+-..+++ ....+...+. | +.......+..+.+.+|.+|+.+..+..|.+ .+. T Consensus 87 ~Iv~~~~~~l~g~p~~~~~~d~~-----~~~~l~~~~~---n---~~~~~~~~~~~~~~~~G~~~~~v~~d~~~~~-~i~ 154 (468) T protein:vir:96 87 NLVDQKVAYAVANPVTYGTEDEK-----SLKTIQEVLN---H---KWDDKLVDILTAASNKGVEWIQPYVDEQGEF-KTF 154 (468) T ss_pred HHHHHHHhhhccCCceeccCChH-----HHHHHHHHHh---c---CHHHHHHHHHHHHhhcCeEEEEEEEcCCCce-EEE Confidence 67777777777777776433221 1123333342 2 3455666788999999999999988888865 577 Q ss_pred eeCCcceEEEEcCCcceee-eeeEEEeecccCceEEEccceEEEeecC-------------------------CC----- Q lcl|Aclame:pro 134 PIDASKVTVYIDDVGLLNS-KTKMWYVVNTGGQQRVLKPEEILHFKNG-------------------------IT----- 182 (429) Q Consensus 134 ~l~p~~v~~~~~~~~~~~~-~~~~~~~~~~~g~~~~~~~~evih~~~~-------------------------~~----- 182 (429) .++|..+.++.+....... ....+|..........+.+..+.|++.. ++ T Consensus 155 ~~~p~~~~~v~~~~~~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iP 234 (468) T protein:vir:96 155 RVPAEQAIPIWTNKERDELKAFIRLYELDGGERVEYWTANDVTFYELKDGQLIPDYYQGEEHVQAHYYVGNKSMSWNRVP 234 (468) T ss_pred EEcccceEEEEcCCCCCceEEEEEEEEecCceEEEEEeCCeEEEEEEcCCceeecccccccccccceeeccccccCCccc Confidence 7888888877654321111 1111111111111111222222222110 00 Q ss_pred ----CCcccccCHHHHHHHHHHHHHHHHHHHHHHHHccCCcceEEEeCCCCCHHHHHHHHHHHHHHhcccccccceeecC Q lcl|Aclame:pro 183 ----LDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGDLNEDAKKVFRENFESMSSGLQNSHRIALMP 258 (429) Q Consensus 183 ----~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~g~~~~~~~~vl~ 258 (429) .+...|.|-++.+...++....+.....+.++..+.|-.+++--.... .+.....+ . .++++.++ T Consensus 235 vv~~~n~~~g~sd~e~v~~liDa~d~~~S~~~~~~~~~~~p~lv~~g~~~~~---~~~~~~~~----~----~~~~i~~~ 303 (468) T protein:vir:96 235 FIPFKNNPQEVSDLFMYKTIIDAMDKRLSDTQNTFDEATELIYVLKGYEGED---LEEFMYNL----K----YYKAINVD 303 (468) T ss_pred EEEecCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHhcCceeeeecCCccc---cchhhhhh----h----cCceEEec Confidence 012457888888777777777666666666677777755554321111 11111111 1 12334332 Q ss_pred --C--CceeEecCCChhHHHHHHHHHHHHHHHHHHhcCChhhcCC-ccccccccHH----------HHHHHHHHHHHhHH Q lcl|Aclame:pro 259 --V--GYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLND-LSKATLNNIE----------QQQQQFYTDTLQAT 323 (429) Q Consensus 259 --~--g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~fgvp~~~l~~-~~~~~~~n~~----------~~~~~~~~~~l~P~ 323 (429) + +++|.....+ ...+.+..+.....|...-++|...... .+..++...+ +.....+...+.-+ T Consensus 304 ~d~~~~~~~l~~~~~--~~~~~~~~~~l~~~I~~~s~~p~~~~~~~~~n~Sg~Alk~~~~~l~~k~~~k~~~~~~~l~~~ 381 (468) T protein:vir:96 304 GDGSGGVDTIQIDVP--VQSAKEYLDMLRDYVIEFGQGVDFQQDKFGNSPSGIALKFMYSNLDLKANKLKNKTLTALQEL 381 (468) T ss_pred CCCCCcceEEeecCC--hHHHHHHHHHHHHHHHHHhCcccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Confidence 2 3455544443 3445667778888888888887543221 1111111111 11223333344444 Q ss_pred HHHHHHHHHHhhccchhhcchhhhhhhhhhHhhhhHHHHHHHHHHHHhCCCCCHHHHHHHhCCCCCCC--cceeeecccc Q lcl|Aclame:pro 324 LTMYEQEMTYKLFLDSELDKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEAG--GDRLLVNGNM 401 (429) Q Consensus 324 ~~~i~~~l~~~ll~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~Gl~~~~~--gD~~~~~~n~ 401 (429) ++.|...+. .........+.|+ .-+..|..+.++. +..+|+++...++++++.-..+. .+.. ..-- T Consensus 382 ~~li~~~~g-----~~~d~~~i~i~f~--~~~p~d~~e~a~~---~~~~g~iS~et~i~~l~~v~D~~~E~~ri--~~E~ 449 (468) T protein:vir:96 382 LQYIIDFYK-----LSIKVQDVEITFN--FNVMVNELEQSQI---GVNSQYLSKETVVTNHPWVDDPVAEMERI--DQEE 449 (468) T ss_pred HHHHHHHhC-----CCcccceeeEEec--CCCCcCHHHHHHH---HHhcCCCchHHHHHhCCCCCCHHHHHHHH--HHHH Confidence 444433221 1111222344453 3355666665554 45679999988988875532221 1111 0000 Q ss_pred ccccccccccCCCCCCCCCCC Q lcl|Aclame:pro 402 LPIDMAGQAYLKGGDTNGEVS 422 (429) Q Consensus 402 ~~~~~~~~~~~~~g~~~~~~~ 422 (429) . ......+.-+|.+++++. T Consensus 450 ~--~~~~~~~~~~~~~~~~~~ 468 (468) T protein:vir:96 450 L--ALPSIEEGLNGKENNEPT 468 (468) T ss_pred H--HHHHHhhccCCCCCCCCC Confidence 0 000011112222222222 No 217 >protein:vir:102950 Length: 471 # NCBI annotation: portal protein # Family: family:all:125 # MgeID: mge:1461 # MgeName: EJ-1 # Cross-refs: genbank:acc:NP_945279;genbank:gi:39653714;interpro:IPR006428;uniprot:Q708N3;genbank:GeneID:2672864 Probab=97.67 E-value=3.1e-05 Score=45.33 Aligned_cols=381 Identities=9% Similarity=0.003 Sum_probs=169.7 Q ss_pred Cch--hhhhhcccccccccccccCCchHHHHHhh-c--------------------CCCCcceechhhhhccHHHHHHHH Q lcl|Aclame:pro 1 MDS--VKKFFNFEKRQTSQVIELNKDDEKLLEWL-G--------------------ISPSTISVKGKNALKVATVFACIK 57 (429) Q Consensus 1 Mg~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--------------------~~~~~~~~~~~~a~~~~~v~~~i~ 57 (429) |.+ +.++............. ....+-+.. | .........+..=+.++....+++ T Consensus 1 ~~~e~~~~~i~~~~~~~~~~~~---~~~~~~~Yy~g~hdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~n~~~~Ivd 77 (471) T protein:vir:10 1 MEIEVIKKIISSQMVKHGKFVS---QAAEAEKYYRNENDIKRKRKPADKKGAENEAKAEDNAFRNADNRISHNWHQLLLD 77 (471) T ss_pred CCHHHHHHHHHHHHHHHHHHHH---HHHHHHHHhccccccccccchhhhhcccccccccccccccccceeccchhHHHHH Confidence 222 11111100000000000 000000000 0 000000000000122445566777 Q ss_pred HHHHhhccCceEEEecCCceeeeeecchhhhhhcccCcCCCCHHHHHHHHHHHHHhhCCeEEEEeeCC-CCceEEEEeeC Q lcl|Aclame:pro 58 ILSESVSKLPLKIYQEDEYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDR-KGKVQALWPID 136 (429) Q Consensus 58 ~ia~~ia~~~~~~~~~~~~~~~~~~~~~~~~~l~~~PN~~~s~~~~~~~~~~~~l~~G~~~~~~~~~~-~g~~~~l~~l~ 136 (429) ..+..+-+-|+.+...+++. ......+. . | ........+...++.+|.+|..+.++. +|. ..+..++ T Consensus 78 ~~~~yl~G~p~~~~~~~~~~------~~~l~~~~-~-n---~~~~~~~~~~~~~~~~G~~~~~v~~d~~~g~-~~~~~~~ 145 (471) T protein:vir:10 78 QKKAYALTYPPTFDVDDKKV------NDMIVDVL-G-D---DYERISKQLCVNAGNAGIAWLHVWKDASDNS-FRYACVD 145 (471) T ss_pred hhhhhhcccCceeccCChHH------HHHHHHHH-h-c---CHHHHHHHHHHHHhhCCeEEEEEEeeCCCCe-eEEEEEc Confidence 77777777777764332210 11122221 1 2 234556667888999999999998875 465 4677889 Q ss_pred CcceEEEEcCCcceeee-eeEEEeec--ccCce----EEEccceEEEeecC----------------------------- Q lcl|Aclame:pro 137 ASKVTVYIDDVGLLNSK-TKMWYVVN--TGGQQ----RVLKPEEILHFKNG----------------------------- 180 (429) Q Consensus 137 p~~v~~~~~~~~~~~~~-~~~~~~~~--~~g~~----~~~~~~evih~~~~----------------------------- 180 (429) |..+-++.++....... ...+|... .++.. ..+....+.|++.. T Consensus 146 p~~~~~i~d~~~~~~~~~~ir~~~~~~~~~~~~~~~~~vy~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (471) T protein:vir:10 146 SKEVIPIYSKSLDKKSIGVLRVYSSIDETDGKNYTVYEYWNDKECSFYRHEKEKPLEELETFQAISLIDTMNGDRSSDNS 225 (471) T ss_pred ccceEEEEcCCCCCceEEEEEEEEeeccCCCceeEEEEEEeCCcEEEEEecCCccccccccccccccccccccccccccc Confidence 99988877654321111 11111111 11111 11233333333210 Q ss_pred --CCC---------CcccccCHHHHHHHHHHHHHHHHHHHHHHHHccCCcceEEEeCCCCCHHHHHHHHHHHHHHhcccc Q lcl|Aclame:pro 181 --ITL---------DGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGDLNEDAKKVFRENFESMSSGLQ 249 (429) Q Consensus 181 --~~~---------~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~g~~ 249 (429) ++. +...|.|-+......++....+.....+.++..+.|-.+++-...... +.....+.. T Consensus 226 ~~~~~g~iPvv~~~n~~~~~sd~e~v~~liDa~d~~~S~~~~~~~~~~~~~lv~~g~~~~~~---~~~~~~~~~------ 296 (471) T protein:vir:10 226 FKHDFGLVPFIPFKNNEIETNDLKPIKDLVDVYDKVFSGFVNDTDDVQEVIFVLTNYGGQDK---QEFLEDLKR------ 296 (471) T ss_pred ccCCCCceeEEEeccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHhhCceeeeecCCcccc---chhHHHhhc------ Confidence 000 123577888888887777776666666666666666555543222111 111111111 Q ss_pred cccceeec-------CCCceeEecCCChhHHHHHHHHHHHHHHHHHHhcCChhhcCCccccccccHH----------HHH Q lcl|Aclame:pro 250 NSHRIALM-------PVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKATLNNIE----------QQQ 312 (429) Q Consensus 250 ~~~~~~vl-------~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~fgvp~~~l~~~~~~~~~n~~----------~~~ 312 (429) .+++.+ .++++|.....+ ...+....+...+.|...-++|..-....+..++...+ ... T Consensus 297 --~~~i~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~l~~~I~~~s~tp~~~~~~~gn~Sg~Alk~~~~~l~~k~~~~ 372 (471) T protein:vir:10 297 --YKMIKMDNDGMGDQSGVTTIAIDIP--TEARNLILERTKKQIFISGQGVNPETDKLGNSSGVALKFLYSLLELKAGNM 372 (471) T ss_pred --CCeEEecCCCCccCccceEEeecCC--hHHHHHHHHHHHHHHHHHhCCcCCCcccccCccHHHHHHHHHHHHHHHHHH Confidence 112222 124555554443 33456777777888888888875433222222221111 122 Q ss_pred HHHHHHHHhHHHHHHHHHHHHhhccchhhcchhhhhhhhhhHhhhhHHHHHHHHHHHHhCCCCCHHHHHHHhCCCCCCC- Q lcl|Aclame:pro 313 QQFYTDTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEAG- 391 (429) Q Consensus 313 ~~~~~~~l~P~~~~i~~~l~~~ll~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~Gl~~~~~- 391 (429) ...+...+.-+++.|...+.. .+ .. .+.+.+...+..|..+.++.+.++ +|+++..-++++++.-..+. T Consensus 373 ~~~~~~~l~~~~~li~~~~~~-----~d-~~--~i~i~f~~~~p~n~~e~~~~~~kl--~g~iS~et~~~~~p~v~D~~~ 442 (471) T protein:vir:10 373 ETQFRSGYATLVKMILKHLGL-----SD-KL--KIKQTWTRNSINNDTEMAQVVSTL--ATITSRENVAKSNPIVEDWQD 442 (471) T ss_pred HHHHHHHHHHHHHHHHHHhcc-----CC-Cc--eeEEEeCCCCCCCHHHHHHHHHHH--hccCchHHHHHhCCCCCCHHH Confidence 333444444555444443321 11 12 234444566788999999998887 68899888888876533221 Q ss_pred -cceeeeccccccccccccccCCCCCCCCCCC Q lcl|Aclame:pro 392 -GDRLLVNGNMLPIDMAGQAYLKGGDTNGEVS 422 (429) Q Consensus 392 -gD~~~~~~n~~~~~~~~~~~~~~g~~~~~~~ 422 (429) ...+..- ...... ..+...+.+++.+.+ T Consensus 443 E~eri~~E-~~~~~~--~~~~~~~~~~~~e~~ 471 (471) T protein:vir:10 443 ELRLQKAE-QEGRSE--KLYDMEEVEHESEVE 471 (471) T ss_pred HHHHHHHH-HHHHHh--cccccCCCCCccccC Confidence 1100000 000000 001112222222222 No 218 >protein:vir:106571 Length: 499 # NCBI annotation: putative portal protein # Family: family:all:125 # MgeID: mge:1598 # MgeName: Lj965 # Cross-refs: genbank:acc:NP_958580;genbank:gi:41179240;genbank:GeneID:2717107 Probab=97.57 E-value=4.3e-05 Score=44.50 Aligned_cols=393 Identities=10% Similarity=0.052 Sum_probs=171.0 Q ss_pred Cc--hhhhhhcccccccccccccCCchHHHHHh-------hcCCCCcceechhhhhccHHHHHHHHHHHHhhccCceEEE Q lcl|Aclame:pro 1 MD--SVKKFFNFEKRQTSQVIELNKDDEKLLEW-------LGISPSTISVKGKNALKVATVFACIKILSESVSKLPLKIY 71 (429) Q Consensus 1 Mg--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~ 71 (429) |. ++.++......... . ...+.+. +.+...... ....=+.......+|+..+..+-+-|+.+. T Consensus 16 ~~~~~i~~~i~~~~~~~~-~------~~~l~~Yy~g~~~i~~~~~~~~~-~~~~ki~~n~~~~Iv~~~~~~l~g~p~~~~ 87 (499) T protein:vir:10 16 PNIEAINYAIRELQNRKK-R------LDKLSDYYNGKQEIEKHEFDNAT-VEAANVMVNHAKYITDMNVGFMTGNPVKYV 87 (499) T ss_pred CCHHHHHHHHHHHHHHHH-H------HHHHHHHhccccchhcCCcCcCC-CCcceeecchHHHHHHHHhhhhcccCceee Confidence 21 12222111110000 0 0000110 001000000 000001234455677777777777777654 Q ss_pred ecCCceeeeeecchhhhhhcccCcCCCCHHHHHHHHHHHHHhhCCeEEEEeeCCCCce----------------EEEEee Q lcl|Aclame:pro 72 QEDEYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKV----------------QALWPI 135 (429) Q Consensus 72 ~~~~~~~~~~~~~~~~~~l~~~PN~~~s~~~~~~~~~~~~l~~G~~~~~~~~~~~g~~----------------~~l~~l 135 (429) ..+++. .+.+..++.. .....+...+....+.+|.+|.++..+.+|.+ ..+..+ T Consensus 88 ~~~~~~-----~~~l~~~~~~-----n~~~~~~~~~~~~~~~~G~~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~~~~v 157 (499) T protein:vir:10 88 AEKGKN-----IDDILEVFNQ-----IDIHKHDIELEKDLSVFGYGYELLYLKKTDPISVRDELGNEKLTPNTELKIEVI 157 (499) T ss_pred cCChhH-----HHHHHHHHhh-----cCHhHHHHHHHHHHHhcCceEEEEEecccccccccccccccccccccceEEEEE Confidence 333211 1234444432 23445677888899999999999988877643 236677 Q ss_pred CCcceEEEEcCCcceeeee-e-EEEeeccc-Cce----EEEccceEEEeec----------------CCCC--------- Q lcl|Aclame:pro 136 DASKVTVYIDDVGLLNSKT-K-MWYVVNTG-GQQ----RVLKPEEILHFKN----------------GITL--------- 183 (429) Q Consensus 136 ~p~~v~~~~~~~~~~~~~~-~-~~~~~~~~-g~~----~~~~~~evih~~~----------------~~~~--------- 183 (429) +|..+-++.+......... . .++..... +.. ..++++.|.+++. +++. T Consensus 158 ~p~~~~~v~~d~~~~~~~~~i~~~~~~~~~~~~~~~~~~iyt~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~vPvv~~~ 237 (499) T protein:vir:10 158 DPRATVVVCDDTVEHDPLFAVFTQEKKDLEGNTNGYSITVYMPQRIVEYRTKTTMEVSANDPIVYDGENLFGAVPIIEFR 237 (499) T ss_pred cccceEEEecCCCCcceEEEEEEEEEeecCCCceEEEEEEEeCCeEEEEEecCCccccCcceecccccCCCCccceEEec Confidence 7877766665432211111 1 11111111 110 1123333333220 0000 Q ss_pred CcccccCHHHHHHHHHHHHHHHHHHHHHHHHccCCcceEEEeCCCCC-HHHHHHHHHHHHHHhcccccccceee--cCCC Q lcl|Aclame:pro 184 DGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGDLN-EDAKKVFRENFESMSSGLQNSHRIAL--MPVG 260 (429) Q Consensus 184 ~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~-~e~~~~~~~~~~~~~~g~~~~~~~~v--l~~g 260 (429) +...|.|-+..+...++....+.....+.++..+.|..+++-..... .+....+ ..+.+.. .++| T Consensus 238 n~~~~~~d~e~v~~liD~~~~~~S~~~~~~~~~~~~~lv~~G~~~~~~~~~~~~~------------~~~~~~~~~~~~~ 305 (499) T protein:vir:10 238 NNEERQGDFEQLISLIDAYNLLQTDRISDKEAFVDALLVTFGFGLGDDKDDIQRL------------KRGAIEAPPREEG 305 (499) T ss_pred CCCCCCCchHhHHHHHHHHHHHHHHHHHHHHHhcCceeeeecCccccccchhhhh------------hhcceeccCCCCC Confidence 12357787888888888777776666666677777766665321111 1111111 1122222 2345 Q ss_pred ceeEecCCChhHHHHHHHHHHHHHHHHHHhcCChhhcCC-cccccccc----------HHHHHHHHHHHHHhHHHHHHHH Q lcl|Aclame:pro 261 YQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLND-LSKATLNN----------IEQQQQQFYTDTLQATLTMYEQ 329 (429) Q Consensus 261 ~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~fgvp~~~l~~-~~~~~~~n----------~~~~~~~~~~~~l~P~~~~i~~ 329 (429) .++..+........+.+..+...+.|...-++|...... .+..++-. ..+.....+..++.-+++.+.. T Consensus 306 ~d~~~l~~~~~~~~~~~~~~~l~~~I~~~s~~p~~~~~~~~gn~Sg~Al~~~~~~l~~k~~~k~~~~~~~l~~~~~li~~ 385 (499) T protein:vir:10 306 ADIEWLTKSFDETQVNLLSQSIENDIHKISYVPNMNDEKFMGNVSGEAMKFKLFGLENLLSIKQRYFFDGLRRRLKLIQT 385 (499) T ss_pred CcceEEeccCCHHHHHHHHHHHHHHHHHHhCcccCCchhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Confidence 555544443334445566777777777777776422211 11111111 1122234445555555555554 Q ss_pred HHHHhhccchhhcchhhhhhhhhhHhhhhHHHHHHHHHHHHhCCCCCHHHHHHHhCCCCCCC--cceee------ecccc Q lcl|Aclame:pro 330 EMTYKLFLDSELDKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEAG--GDRLL------VNGNM 401 (429) Q Consensus 330 ~l~~~ll~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~Gl~~~~~--gD~~~------~~~n~ 401 (429) -++.+ .......+..+.| ..-+..+..+.++.+.++ +|+++..-++++++.-+.+. ...+. ..... T Consensus 386 ~~~~~--~~~~d~~~i~i~f--~~~~p~n~~e~~~~~~kl--~g~iS~et~~~~l~~v~d~~~E~~ri~~E~~~~~~~~~ 459 (499) T protein:vir:10 386 IVNIK--GANDDASGCKISL--VANIPSNLSDVVNNVKNA--DGIIPRKYTYSWLPDVDNPQDVIDEMNQQDAETIKKNQ 459 (499) T ss_pred HHhcc--CCccccccceEEe--CCCCCCCHHHHHHHHHHH--hccCChHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHH Confidence 43321 1111112334444 444678889999999887 68899988888887633221 11110 00000 Q ss_pred ccccccc-cc-cCCCCCCCCC--CCCCCCCCC Q lcl|Aclame:pro 402 LPIDMAG-QA-YLKGGDTNGE--VSKEGNEGN 429 (429) Q Consensus 402 ~~~~~~~-~~-~~~~g~~~~~--~~~~~~~~n 429 (429) .+..... +. ...++++..+ ..+.+.+++ T Consensus 460 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 491 (499) T protein:vir:10 460 EALRGQDPDRLELEDKQDDSSENDKEAGSNHN 491 (499) T ss_pred hhhccCCCCCCCCCCCCcccCCCCCCCccccc Confidence 0111000 00 0011111111 011111111 No 219 >protein:vir:101494 Length: 527 # NCBI annotation: gp9 # Family: family:all:6920 # MgeID: mge:1627 # MgeName: PLot # Cross-refs: genbank:acc:YP_655388;genbank:gi:109522576;genbank:GeneID:4157566 Probab=96.30 E-value=0.00076 Score=37.68 Aligned_cols=400 Identities=10% Similarity=0.010 Sum_probs=184.3 Q ss_pred CchhhhhhcccccccccccccCCchHH------------------HHHhhcC-CCCccee-chhhh-hccHHHHHHHHHH Q lcl|Aclame:pro 1 MDSVKKFFNFEKRQTSQVIELNKDDEK------------------LLEWLGI-SPSTISV-KGKNA-LKVATVFACIKIL 59 (429) Q Consensus 1 Mg~~~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~-~~~~~~~-~~~~a-~~~~~v~~~i~~i 59 (429) |+-=.|=.. .+.++...... +.++-.. +.....+ ..+.+ .+.+.+.-....| T Consensus 1 ~~~~~~~~~-------~~~~~~~g~~~~p~~v~~~d~~Rl~aY~l~~~~y~n~~~~~~~~lrg~~~~~~r~~~~ps~~~~ 73 (527) T protein:vir:10 1 MGQDKRQYG-------STQQLRAGEANFPNAVTDFDKARLASYRLYEDMYLTNTSDYQVILRGGDEGDQRPIYVPNGEKL 73 (527) T ss_pred CCccccccC-------CCcCcCCccccCcccCCHHHHHHHHHHHHHHHHhcCchhheeeecCCccccccceeeehhhHHh Confidence 554222111 11111000000 0000000 0000000 00000 0001100000111 Q ss_pred HHhhccCceEEEecC--CceeeeeecchhhhhhcccCcCCCCHHHHHHHHHHHHHhhCCeEEEEeeCC---CCceEEEEe Q lcl|Aclame:pro 60 SESVSKLPLKIYQED--EYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDR---KGKVQALWP 134 (429) Q Consensus 60 a~~ia~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~PN~~~s~~~~~~~~~~~~l~~G~~~~~~~~~~---~g~~~~l~~ 134 (429) -. +...|.+..-+ .++..+ .+...|+. --....+....++.-.+-++.|.+.+.+..+. .|....+.. T Consensus 74 ~~--~~~~~~~~g~~~~~~~~~e----~v~~~lr~-~~~~e~l~~~~~~~~r~~~vlGDg~f~l~wD~~k~~~~R~~v~~ 146 (527) T protein:vir:10 74 IE--AKMRFLGQGLKWEFSKKDA----KVDDAIKV-LFDRENWEQKFESLKRWTEIRGDYVLLLIGDDEKDEGSRLSLHE 146 (527) T ss_pred hC--CcceeeccCccccccchhH----HHHHHHHH-HHHHhhhHHHHHHHHHhhhhhcceeEEEeeccCCCcCCCceEee Confidence 00 01111111100 000111 12222221 11124455667777788889999998888874 345667777 Q ss_pred eCCcceEEEEcCCcceeeeeeEEE-----------------------eecccC------ce------------------- Q lcl|Aclame:pro 135 IDASKVTVYIDDVGLLNSKTKMWY-----------------------VVNTGG------QQ------------------- 166 (429) Q Consensus 135 l~p~~v~~~~~~~~~~~~~~~~~~-----------------------~~~~~g------~~------------------- 166 (429) ++|..+-.+.+.++.......+.. ..+..| .. T Consensus 147 ~DP~~~f~~ed~d~~~~v~~v~~~~~~~~P~d~~~~~~~ar~~~~~~~l~~~g~~~~~G~~~yt~~~w~lg~w~d~~e~p 226 (527) T protein:vir:10 147 VDPSTYFPYEDPRYPGQVLGVYLVDEYPHPDSEKKNEKCARVQKYMKTLDDDGKPVPGGAIKYTEELYEPGKWDDRPESP 226 (527) T ss_pred cCcceeeeeecCCCCCceeeEEEeeeccCCccccccceehhhhhhhhhcCcccccccCcceeeeeceeeccccccccccc Confidence 887766655444322111111000 000001 00 Q ss_pred --------------E-----EEccceEEEeecCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHHccCCcceEEEeCC Q lcl|Aclame:pro 167 --------------R-----VLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVG 227 (429) Q Consensus 167 --------------~-----~~~~~evih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~ 227 (429) . .++.=-|+|+++-.+.+...|.|-++-+...++.......-.....+-+|.|-.++.. T Consensus 227 ~~~~~~~~~~~~~~l~~lp~pi~fiPvV~~~t~p~~~~~WG~S~La~ll~l~deLn~~~Td~s~is~~sG~Pi~~~tg-- 304 (527) T protein:vir:10 227 LEPDDIKKLSTLTEEEPLPEQITTLPVFHFRGHPIMNAMFGRSGLAGLESLIASVNQTMTDEDLIMVFGGLGFYATDS-- 304 (527) T ss_pred cchhhhhhhcCceeeecccCCCCccceEeecCCCccccccChhhHhHHHHHHHHHhhhhhHHHHHHHHhCCceeeecc-- Confidence 0 0111137899877888899999999988877777766666666666667766555432 Q ss_pred CCCHHHHHHHHHHHHHHhcccccccceeecCCCceeEecCCChhHHHHHHHHHHHHHHHHHHhcCChhhcCCcccccccc Q lcl|Aclame:pro 228 DLNEDAKKVFRENFESMSSGLQNSHRIALMPVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKATLNN 307 (429) Q Consensus 228 ~~~~e~~~~~~~~~~~~~~g~~~~~~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~fgvp~~~l~~~~~~~~~n 307 (429) ..+.+.+-...- +. -.-|.++-|+++.++..++..+.-..+....+...+.|+..=++|..-+|..+.++ + T Consensus 305 -~~~vd~~G~~~~----~~--VgPG~iweL~e~ak~~~v~~~~~la~~~~h~~~L~~~l~~vA~~PavA~G~vD~s~--~ 375 (527) T protein:vir:10 305 -APPRDSRGNMVP----WT--ISPLGMVEHGQNNKIYRVNGVASLEPSQTHMTKAEEAMQQTKGIPDIAVGVVDAAV--A 375 (527) T ss_pred -cccccccCCcCc----cc--cCCceeEecCCCcceeeccchhhhHHHHHHHHHHHHHHHHhhcCCeeeeccccCCc--C Confidence 112111100000 00 11245666899999999888776666778888999999999999999998555433 1 Q ss_pred HHHHHHHHHHHHHhHHHHHHHHH-------HHH-------hhccc------hhhcchhhhhhhhhhHhhhhHHHHHHHHH Q lcl|Aclame:pro 308 IEQQQQQFYTDTLQATLTMYEQE-------MTY-------KLFLD------SELDKGFYSKFNVDAILRADIKTRYEAYR 367 (429) Q Consensus 308 ~~~~~~~~~~~~l~P~~~~i~~~-------l~~-------~ll~~------~~~~~~~~~~fd~~~l~~~d~~~~~~~~~ 367 (429) .... -++-.+.|++..-+.. +-+ .++.. ........+...+...+..|.++..+... T Consensus 376 ~SG~---ALeL~L~PLlar~~rk~L~~~~vqrq~~~~~~~~~L~aye~v~~~d~~~~~~v~ivf~p~lP~D~~avie~v~ 452 (527) T protein:vir:10 376 ESGI---ALDLKLSAILSSCAEQELELKSVLKQFFYNLVTQWLPAYEGVGIDDADKKLTVTITFRDPKPVNSEKRFNQLL 452 (527) T ss_pred cHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHhhhcccCCCccccceEEEecccCCCCHHHHHHHHH Confidence 1111 1222233333322111 000 00000 00011112233335568899999999999 Q ss_pred HHHhCCCCCHHHHHHHh---CCCCCCCcc------eeeeccccccccccccccCC-CCCCCCCCCCCCCCCC Q lcl|Aclame:pro 368 TGIQGGFLKPNEARSKE---DLPPEAGGD------RLLVNGNMLPIDMAGQAYLK-GGDTNGEVSKEGNEGN 429 (429) Q Consensus 368 ~~~~~g~~t~NE~R~~~---Gl~~~~~gD------~~~~~~n~~~~~~~~~~~~~-~g~~~~~~~~~~~~~n 429 (429) +++.+|+++.-=+-++| |.-..+..+ +... ...+-+++.+..... +++.-.+.+...+.+| T Consensus 453 tL~~aGi~S~~tAv~~L~~~~g~eD~E~E~~~I~~era~-~a~a~a~A~~~~~a~~~~~~g~~~~~~d~~~~ 523 (527) T protein:vir:10 453 QLWEAGLIPAKKLTEELSKIMGFELTEEDFKQATEDKKT-QGIAQAEAADPFGAQMAAEQGIPDEEDDQALN 523 (527) T ss_pred HHHHcCchhHHHHHHHHHhccCCCChHHHHHHHHHHHHH-HhHHhhhhcCchhhhhccccCCCCCCcccccC Confidence 99999999999887777 332222222 1100 011122222222222 3333333344444555 No 220 >protein:vir:102239 Length: 527 # NCBI annotation: gp9 # Family: family:all:6920 # MgeID: mge:1648 # MgeName: PBI1 # Cross-refs: genbank:acc:YP_655205;genbank:gi:109522785;genbank:GeneID:4157478 Probab=96.26 E-value=0.00081 Score=37.52 Aligned_cols=401 Identities=10% Similarity=0.009 Sum_probs=184.4 Q ss_pred CchhhhhhcccccccccccccCCchHH------------------HHHhhcC-CCCccee-chhhh-hccHHHHHHHHHH Q lcl|Aclame:pro 1 MDSVKKFFNFEKRQTSQVIELNKDDEK------------------LLEWLGI-SPSTISV-KGKNA-LKVATVFACIKIL 59 (429) Q Consensus 1 Mg~~~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~-~~~~~~~-~~~~a-~~~~~v~~~i~~i 59 (429) |+-=.|=.. .+.++...... +.++-.. +.....+ ..+.+ .+.+.+.-....| T Consensus 1 ~~~~~~~~~-------~~~~~~~g~~~~p~~v~~~d~~Rl~aY~l~~~~y~n~~~~~~~~lrg~~~~~~r~~~~ps~~~~ 73 (527) T protein:vir:10 1 MGQDKRQYG-------STQQLRAGEANFPNAVTDFDKARLASYRLYEDMYLTNTSDYQVILRGGDEGDQRPIYVPNGEKL 73 (527) T ss_pred CCccccccC-------CCcCcCCccccCcccCCHHHHHHHHHHHHHHHHhcCchhheeeecCCccccccceeeehhhHHh Confidence 554222111 11111000000 0000000 0000000 00000 0001100000111 Q ss_pred HHhhccCceEEEecC--CceeeeeecchhhhhhcccCcCCCCHHHHHHHHHHHHHhhCCeEEEEeeCC---CCceEEEEe Q lcl|Aclame:pro 60 SESVSKLPLKIYQED--EYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDR---KGKVQALWP 134 (429) Q Consensus 60 a~~ia~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~PN~~~s~~~~~~~~~~~~l~~G~~~~~~~~~~---~g~~~~l~~ 134 (429) -. +...|.+..-+ .++..+ .+...|+. --....+....++.-.+-++.|.+.+.+..+. .|....+.. T Consensus 74 ~~--~~~~~~~~g~~~~~~~~~e----~v~~~lr~-~~~~e~l~~~~~~~~r~~~vlGDg~f~l~wD~~k~~~~R~~v~~ 146 (527) T protein:vir:10 74 IE--AKMRFLGQGLKWEFSKKDA----KVDDAIRV-LFDRENWEQKFESLKRWTEIRGDYVLLLIGDDEKDEGSRLSLHE 146 (527) T ss_pred hC--CcceeeccCccccccchhH----HHHHHHHH-HHHHhhhHHHHHHHHHhhhhhcceeEEEeeccCCCcCCCceEee Confidence 00 01111111100 000111 12222221 11124455667777788889999998888874 345667777 Q ss_pred eCCcceEEEEcCCcceeeeeeEEE-----------------------eecccC------ce------------------- Q lcl|Aclame:pro 135 IDASKVTVYIDDVGLLNSKTKMWY-----------------------VVNTGG------QQ------------------- 166 (429) Q Consensus 135 l~p~~v~~~~~~~~~~~~~~~~~~-----------------------~~~~~g------~~------------------- 166 (429) ++|..+-.+.+.++.......+.. ..+..| .. T Consensus 147 ~DP~~~f~~ed~d~~~~v~~v~~~~~~~~P~d~~~~~~~ar~~~~~~~l~~~g~~~~~G~~~yt~~~w~lg~w~d~~e~p 226 (527) T protein:vir:10 147 VDPSTYFPYEDPRYPGQVLGVYLVDEYPHPDSEKKNEKCARVQKYMKTLDDDGKPVPGGAIKYTEELYEPGKWDDRPESP 226 (527) T ss_pred cCcceeeeeecCCCCCceeeEEEeeeccCCccccccceehhhhhhhhhcCcccccccCcceeeeeceeeccccccccccc Confidence 877766655444322111111000 000001 00 Q ss_pred --------------E-----EEccceEEEeecCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHHccCCcceEEEeCC Q lcl|Aclame:pro 167 --------------R-----VLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVG 227 (429) Q Consensus 167 --------------~-----~~~~~evih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~ 227 (429) . .++.=-|+|+++-.+.+...|.|-++-+...++.......-.....+-+|.|-.++.. T Consensus 227 ~~~~~~~~~~~~~~l~~lp~pi~fiPvV~~~t~p~~~~~WG~S~La~ll~l~deLn~~~Td~s~is~~sG~Pi~~~tg-- 304 (527) T protein:vir:10 227 LEPDDIKKLSTLTEEEPLPEQITTLPVFHFRGHPIMNAMFGRSGLAGLESLIASVNQTMTDEDLIMVFGGLGFYATDS-- 304 (527) T ss_pred cchhhhhhhcCceeeecccCCCCccceEeecCCCccccccChhhHhHHHHHHHHHhhhhhHHHHHHHHhCCceeeecc-- Confidence 0 0111137899877888899999999988877777766666666666667766555432 Q ss_pred CCCHHHHHHHHHHHHHHhcccccccceeecCCCceeEecCCChhHHHHHHHHHHHHHHHHHHhcCChhhcCCcccccccc Q lcl|Aclame:pro 228 DLNEDAKKVFRENFESMSSGLQNSHRIALMPVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKATLNN 307 (429) Q Consensus 228 ~~~~e~~~~~~~~~~~~~~g~~~~~~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~fgvp~~~l~~~~~~~~~n 307 (429) ..+.+.+-...- +. -.-|.++-|+++.++..++..+.-..+....+...+.|+..=++|..-+|..+.++ + T Consensus 305 -~~~vd~~G~~~~----~~--VgPG~iweL~e~ak~~~v~~~~~la~~~~h~~~L~~~l~~vA~~PavA~G~vD~s~--~ 375 (527) T protein:vir:10 305 -APPRDSRGNMVP----WT--ISPLGMVEHGQNNKIYRVNGVASLEPSQTHMNKAEEAMQQTKGIPDIAVGVVDAAV--A 375 (527) T ss_pred -cccccccCCcCc----cc--cCCceeEecCCCcceeeccchhhhHHHHHHHHHHHHHHHHhhcCCeeeeccccCCc--C Confidence 112111100000 00 11245666899999999988776666778889999999999999999998555433 1 Q ss_pred HHHHHHHHHHHHHhHHHHHHHHH-------HHH-------hhccc------hhhcchhhhhhhhhhHhhhhHHHHHHHHH Q lcl|Aclame:pro 308 IEQQQQQFYTDTLQATLTMYEQE-------MTY-------KLFLD------SELDKGFYSKFNVDAILRADIKTRYEAYR 367 (429) Q Consensus 308 ~~~~~~~~~~~~l~P~~~~i~~~-------l~~-------~ll~~------~~~~~~~~~~fd~~~l~~~d~~~~~~~~~ 367 (429) .... -++-.+.|++..-+.. +-+ .++.. ........+...+...+..|.++..+... T Consensus 376 ~SG~---ALeL~L~PLlar~~rk~L~~~~Vqrq~~~~~~~~~L~aye~v~~~d~~~~~~v~ivf~p~lP~D~~avie~v~ 452 (527) T protein:vir:10 376 ESGI---ALDLKLSAILSSCAEQELELKSVLKQFFYNLVTQWLPAYEGVGIDDADKKLTVTITFRDPKPVNNEKRFAQLL 452 (527) T ss_pred cHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHhhhcccCCCccccceEEEecccCCCCHHHHHHHHH Confidence 1111 1222233333322111 000 00000 00011112233335568899999999999 Q ss_pred HHHhCCCCCHHHHHHHh---CCCCCCCcceeee-----ccccccccccccccCC-CCCCCCCCCCCCCCCC Q lcl|Aclame:pro 368 TGIQGGFLKPNEARSKE---DLPPEAGGDRLLV-----NGNMLPIDMAGQAYLK-GGDTNGEVSKEGNEGN 429 (429) Q Consensus 368 ~~~~~g~~t~NE~R~~~---Gl~~~~~gD~~~~-----~~n~~~~~~~~~~~~~-~g~~~~~~~~~~~~~n 429 (429) +++.+|+++.-=+-++| |.-..+..+.-.+ ....+-+++.+..... +++.-.+.+...+.+| T Consensus 453 tL~~aGiiS~etAv~~L~~~~g~eD~E~E~~~I~~era~~a~a~a~a~~~~~a~~~~~~g~~~~~~d~~~~ 523 (527) T protein:vir:10 453 ELWEAGLIPAKKLTEELSKIMGFELTEEDFRQATEDKKTQGIAQAEAADPFGAQMAAEQGIPDEEDDQALN 523 (527) T ss_pred HHHHcCchhHHHHHHHHHhccCCCchHHHHHHHHHHHHHHhHHhhhhcCchhhhhccccCCCCCCcccccC Confidence 99999999999887777 3322222221000 0011122222222222 3333333344444555 No 221 >protein:vir:98265 Length: 524 # NCBI annotation: gp20 portal vertex of the head # Family: family:all:1036 # MgeID: mge:1667 # MgeName: RB43 # Cross-refs: genbank:acc:YP_239198;genbank:gi:66391673;genbank:GeneID:3416367 Probab=95.62 E-value=0.0017 Score=35.73 Aligned_cols=408 Identities=10% Similarity=0.086 Sum_probs=174.1 Q ss_pred Cchhh--hhhccccc-----------cccc-ccccCCchHH--H------HHhhcCC---C----Ccce------echhh Q lcl|Aclame:pro 1 MDSVK--KFFNFEKR-----------QTSQ-VIELNKDDEK--L------LEWLGIS---P----STIS------VKGKN 45 (429) Q Consensus 1 Mg~~~--~~~~~~~~-----------~~~~-~~~~~~~~~~--~------~~~~~~~---~----~~~~------~~~~~ 45 (429) ||+++ ++|.+..+ ++.. +.+....+.. + ..+.|.. . .... -..+. T Consensus 4 ~~~~~~l~~~~~~~~~d~~~~~~~~~~~~~s~~~p~~~dGa~~i~~~~~~~~~~g~~~~~y~~~e~~~~~~~eLI~~YR~ 83 (524) T protein:vir:98 4 LGFGNVLSFFKNFAREDEIELEQQLKNDTGSVAPPKNNDGAYEIETDLNNQKYAGVFQQFYSGQDPAIQNKEQLINTYRG 83 (524) T ss_pred cchhhHHHHhhhhhhhhhhhHhhhhcCCcccccCCCCCCCceeecCCCCcceecceeeeeccccccccchHHHHHHHHHH Confidence 44444 22332221 1111 1111111000 0 0011110 0 0000 01244 Q ss_pred hhccHHHHHHHHHHHHhhcc-----CceEEEecCCc---eeeeeecchhhhhhcccCcCCCCHHHHHHHHHHHHHhhCCe Q lcl|Aclame:pro 46 ALKVATVFACIKILSESVSK-----LPLKIYQEDEY---GIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNS 117 (429) Q Consensus 46 a~~~~~v~~~i~~ia~~ia~-----~~~~~~~~~~~---~~~~~~~~~~~~~l~~~PN~~~s~~~~~~~~~~~~l~~G~~ 117 (429) .+.+|.|-.||+.|.+.+.- -|+.+.-.+-+ +........+.++|+. -+....+ ..+++.|.+.|.. T Consensus 84 ma~~pEvd~Av~eIVneaIv~~~~~~pV~l~L~~~~~s~~iK~kI~eeF~~Il~l-l~F~~~~----~~~fR~WYVDgRi 158 (524) T protein:vir:98 84 IMSYPEVENAVSEIIDDAIVNEQGKDIITMDLAKTNFSKAIQDKIVEEFDNVLNI-YDFDNMG----ARLFRDWYVDSRI 158 (524) T ss_pred HhhccchhhHHHhhhcceeEecCCCceEEEEecccccchHHHHHHHHHHHHHHHH-hccchhh----hHHHhhhhhccee Confidence 56789999999999987632 12222111110 0000111223334431 2222333 3456667888999 Q ss_pred EEEEeeCCCCc--eEEEEeeCCcceEEEEc------CCcc-eeeeeeEEEeec-------------ccCceEEEccceEE Q lcl|Aclame:pro 118 YANIEFDRKGK--VQALWPIDASKVTVYID------DVGL-LNSKTKMWYVVN-------------TGGQQRVLKPEEIL 175 (429) Q Consensus 118 ~~~~~~~~~g~--~~~l~~l~p~~v~~~~~------~~~~-~~~~~~~~~~~~-------------~~g~~~~~~~~evi 175 (429) |+.++.+.+.. ..+|..|+|..|+.++. +.+. .......++.+. .-+....++.+.|+ T Consensus 159 ~fhkiid~~~~kGI~ELr~lDPr~i~~vr~~~~~~~~~~~~v~~~~~e~f~Y~~~~~~~~~~g~~~~~~~~ikI~~dAIv 238 (524) T protein:vir:98 159 YFHKIMHKDESKGIRELRQLDPRCMELIRESITETLDGGVKVFRGYREFFVYSAPKAGYTYNGQIYQANQKIKIPRSAIV 238 (524) T ss_pred EEEEEEcCCCCcceeeeeeeCCccceeeeeccccccccchhhccceeeeeeeccCCCccccccceecCCCceeechhhee Confidence 99988664433 88999999999977641 1111 111111122222 11234668888898 Q ss_pred EeecCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHHccCCcceEEEeCC-CCCHHHHHHHHHHHHHHhc-------- Q lcl|Aclame:pro 176 HFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVG-DLNEDAKKVFRENFESMSS-------- 246 (429) Q Consensus 176 h~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~-~~~~e~~~~~~~~~~~~~~-------- 246 (429) |...+--.....-+|-|..|.+.+....-++...--+--..+.-.-+.-++. .+.+.-+++..+.+...|+ T Consensus 239 y~hSGL~d~~~~iisyLhkAiKp~NQLkm~EDAlVIYRitRAPeRRvFYIDvGnlPk~KAeqYl~~im~k~kNklvYDa~ 318 (524) T protein:vir:98 239 YAHSGLEDCSNNIIGYLHRAVKPANQLRLLEDAMVIYRITRAPERRVFYIDVGQMGGNKATQYVNNIAQGLKNRVVYDAR 318 (524) T ss_pred eeccCcccCCCCeeeehhHhhHhHHhhHHHHhhHHHHhhhccccceEEEEecCCCCchhHHHHHHHHHHhcCceeEeecc Confidence 8775432222222477888887777666555554444444455555555553 3444445555555555543 Q ss_pred --ccccccce-eecC----------CCceeEecCCChhHHHHHHHHHHHHHHHHHHhcCChhhcCCcc-cccc---ccHH Q lcl|Aclame:pro 247 --GLQNSHRI-ALMP----------VGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLS-KATL---NNIE 309 (429) Q Consensus 247 --g~~~~~~~-~vl~----------~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~fgvp~~~l~~~~-~~~~---~n~~ 309 (429) ...+..+. ..++ .|.+++.|.-. +.+.-++-..+..+.+.++++||.+-|...+ ..+. +.+. T Consensus 319 TGevrddrk~msMlEDyWLpRReGgrgTEItTLpgg-qnlgem~DV~YF~kkLy~aLnVP~sRl~~~~~~f~~Gr~~EIt 397 (524) T protein:vir:98 319 TGTVKNQQNNLSMTEDYWLMRRDGKAITEVSTLPGG-QNFSDMDDIKWFNRKLYEALRVPLSRMPRDDGGMQIGGGGEIT 397 (524) T ss_pred CceeeccccccchhhhhcccccCCCCccceeecccc-CCcChHHHHHHHHHHHHHHhCCCceeccCCCCccccccccchh Confidence 11112222 2221 36777776532 2222335566778999999999999986422 1111 1111 Q ss_pred ---HHHHHHHHHHHhHHHHHHHHHHHHhhccchhhcch--------hhhhhhhhhH----hhh-hHHHHHHHHHHHHh-- Q lcl|Aclame:pro 310 ---QQQQQFYTDTLQATLTMYEQEMTYKLFLDSELDKG--------FYSKFNVDAI----LRA-DIKTRYEAYRTGIQ-- 371 (429) Q Consensus 310 ---~~~~~~~~~~l~P~~~~i~~~l~~~ll~~~~~~~~--------~~~~fd~~~l----~~~-d~~~~~~~~~~~~~-- 371 (429) =....|+..-=.-+...|.+.|.+.|..+.-.... +++.|..|.. ... -+..|...+..+-. T Consensus 398 RDEiKF~KFI~rLR~rFs~lf~~~L~~qLilKgiit~eew~~i~~~I~~~f~~Dn~f~ElKe~Eil~~R~~~l~~~dpyv 477 (524) T protein:vir:98 398 RDELKFSKFIRTLQIQFSPVLSDPLKTNLIAKKIITEDEWEENVSKISFVFQQDSYYAEVKDIEILERRLNLMSQVEGVV 477 (524) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCHHHHHHHhhcceEEEeecchHHHHHHHHHHHHHHHHHHHhcccc Confidence 11222333222233444444554444333222111 2333333321 111 12233333333311 Q ss_pred CCCCCHHHHHH-HhCCCCCC--CcceeeeccccccccccccccCCCCCCCCCCCCCCCCCC Q lcl|Aclame:pro 372 GGFLKPNEARS-KEDLPPEA--GGDRLLVNGNMLPIDMAGQAYLKGGDTNGEVSKEGNEGN 429 (429) Q Consensus 372 ~g~~t~NE~R~-~~Gl~~~~--~gD~~~~~~n~~~~~~~~~~~~~~g~~~~~~~~~~~~~n 429 (429) +.+++.+=+|+ .|.+...+ ..|+.. .. ..+.+--. +-++.+++ T Consensus 478 Gky~s~dyi~k~ILr~tDeei~~~~k~I--------~~----E~k~~~~~---~p~~e~~~ 523 (524) T protein:vir:98 478 GKYVSHKYIMKEILRMSDEDIDEQAKLI--------EE----ESKEERFK---NPEAEEEN 523 (524) T ss_pred ccccchHHHHHHHhccCHHHHHHHHHHH--------HH----HHhCCCCc---CCcccccc Confidence 23556665654 34443221 111100 00 00000000 00001111 No 222 >protein:vir:80453 Length: 535 # NCBI annotation: BcepGomrgp05 # Family: family:all:584 # MgeID: mge:1882 # MgeName: BcepGomr # Cross-refs: genbank:acc:YP_001210225;genbank:gi:146329917;genbank:GeneID:5123562 Probab=95.08 E-value=0.0028 Score=34.58 Aligned_cols=403 Identities=11% Similarity=0.019 Sum_probs=152.6 Q ss_pred Cchhhhhhcccccc------cccccc-----cC---C----------chHHHHHhhcCCCC-------ccee-------- Q lcl|Aclame:pro 1 MDSVKKFFNFEKRQ------TSQVIE-----LN---K----------DDEKLLEWLGISPS-------TISV-------- 41 (429) Q Consensus 1 Mg~~~~~~~~~~~~------~~~~~~-----~~---~----------~~~~~~~~~~~~~~-------~~~~-------- 41 (429) |.--..-.+...+. ++++.+ +. . .+..+-+.++++.. +.+- T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~dV~~~hp~y~a~~~~W~~ird~~~G~~~~r~~g~~YLP~~~~~~~~~ 80 (535) T protein:vir:80 1 MARKRTTIRRDVQSKVLIPPQAPPTSGLGPSLPNVGYQRVEFGEMLPKWRKIMDCLSGQEAIKAKREEYLPMPSVDSRDE 80 (535) T ss_pred CCcchhhhhhhhhhhcccCCCCcCCCCCCCCCCCCCcCCHHHHHHHHHHHHHHHHhcChHHHHhcccccCCCCCcccCCc Confidence 43321111111111 111111 00 0 11111122232211 1110 Q ss_pred -c---hhhhhc----cHHHHHHHHHHHHhhccCceEEEecCCceeeeeecchhhhhhcccCcCCCCHHHHHHHHHHHHHh Q lcl|Aclame:pro 42 -K---GKNALK----VATVFACIKILSESVSKLPLKIYQEDEYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNL 113 (429) Q Consensus 42 -~---~~~a~~----~~~v~~~i~~ia~~ia~~~~~~~~~~~~~~~~~~~~~~~~~l~~~PN~~~s~~~~~~~~~~~~l~ 113 (429) + .+..++ .+++...++.++..+-+-+..+ .....+..++...--...+-.+|.+.++...+. T Consensus 81 E~~~~Y~~rl~rA~~~n~~~~tl~~l~G~vfrk~p~~----------~~p~~l~~l~~d~D~~G~~L~~f~~~~~~~~l~ 150 (535) T protein:vir:80 81 EQRRRYETYLQRAIFYNVTARTLDGMMGQVFSRDPIR----------QLPPALEAIVEDIDGEGVSLDQQAKKALGYTMG 150 (535) T ss_pred CCHHHHHHHHhhccCCChhHHHHHHHhchhhcCCcce----------eccHHHHHHHhccCCCCCCHHHHHHHHHHHHHh Confidence 0 111222 2344455554444443333222 112345555544455666889999999999999 Q ss_pred hCCeEEEEeeCCCCce------------EEEEeeCCcce-----------------E-----EEEcCCcceeeeeeEEEe Q lcl|Aclame:pro 114 YGNSYANIEFDRKGKV------------QALWPIDASKV-----------------T-----VYIDDVGLLNSKTKMWYV 159 (429) Q Consensus 114 ~G~~~~~~~~~~~g~~------------~~l~~l~p~~v-----------------~-----~~~~~~~~~~~~~~~~~~ 159 (429) +|-+++++.....+.. .-+..+.|..| . ...++.+..... ..++. T Consensus 151 ~G~~~iLVD~P~~~~~~t~ade~~~~~rPy~~~y~ae~IinW~~~~v~G~~~Lt~v~lrE~~~~~dd~f~~~~~-~q~Rv 229 (535) T protein:vir:80 151 FGRAAIFTDYPNVGRPVTVLEQKLGLYRPTITLVHPTSIINWRTKLVGGKSVISLVVIQENVLAQDDGFETTYV-QQWRV 229 (535) T ss_pred cCeEEEEEeecCCCCcccHHHHHhcCCCcEEEEechhhccCccccccCCccceeEEEEEEEEEecCCCccccee-EEEEE Confidence 9999999987554432 11222222221 0 011111100000 00101 Q ss_pred e----------------cccCce----EEEccc---------eEEEeecCCCCCcccccCHHHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 160 V----------------NTGGQQ----RVLKPE---------EILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFIN 210 (429) Q Consensus 160 ~----------------~~~g~~----~~~~~~---------evih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~ 210 (429) . ..++.. ..++.+ -++++- ....+...|.+|+..++..--.......-.. T Consensus 230 L~~~~~G~y~v~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~IPfv~~~-~~~~~~~~~~pPLl~LA~lni~Hy~~ssd~~ 308 (535) T protein:vir:80 230 LQLNAEGNYQVERWRRETQEEMYYSYSKHVPTDGNGNPFKEIPFQFIG-PLDNNADIDHPPLLDLCEVNIGHYRNSADYE 308 (535) T ss_pred EEecCCceEEEEEEEeecCCccccccceeecccCCCcccCeeEEEEee-cCCCCCCCCccchHHHHHHHHHHhhchhHHH Confidence 0 000000 011111 122221 2233445678888776655444333333344 Q ss_pred HHHHccCCcceEEEeCCCCCHHHHHHHHHHHHHHhcccccccceeecCCCceeEecCCChhHHHHHHHHHHHHHHHHHHh Q lcl|Aclame:pro 211 NFYKQGLQVKGLVQYVGDLNEDAKKVFRENFESMSSGLQNSHRIALMPVGYQFQPISLNMSDAQFLENTELTIRQIATAF 290 (429) Q Consensus 211 ~~~~ng~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~g~~~~~~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~f 290 (429) ..+...+.|..+++--....++.. .+ -....-|+ ..++.++.|.++.-+..++.-+. .+.++....++++ + T Consensus 309 ~il~~~~~P~l~i~G~~~~~~~~~---~~-~~~i~iG~---~~~~~lP~~~~~~~~e~~~~~~a-~~~l~~~e~qM~~-l 379 (535) T protein:vir:80 309 EMAFVAGQPTAFFTGLTKDWVEDV---FK-DFKVHLGS---RAIIPLPQGATAGILQITPNSVP-FEAMTHKESQMIA-M 379 (535) T ss_pred HHHHHhcCceeeeecCchhhhhcC---CC-CcceEecC---cccccCCCCCCcceeeeccchhH-HHHHHHHHHHHHH-H Confidence 555666788777763222111100 00 00011232 33566776654433333333222 2233333333332 2 Q ss_pred cCChhhcCCccccccccHHHHHHHHHHHHHhHHHHHHHHHHHHhhccchhhc------chhhhhhhhhhHhhhhHHHHHH Q lcl|Aclame:pro 291 GIKMHQLNDLSKATLNNIEQQQQQFYTDTLQATLTMYEQEMTYKLFLDSELD------KGFYSKFNVDAILRADIKTRYE 364 (429) Q Consensus 291 gvp~~~l~~~~~~~~~n~~~~~~~~~~~~l~P~~~~i~~~l~~~ll~~~~~~------~~~~~~fd~~~l~~~d~~~~~~ 364 (429) | ..++........++.......--.+.|.-++..+++.|++.|-....+. ....|..+.+-........... T Consensus 380 G--a~ll~~~~~~~Ta~~a~~~~~~~~S~L~~~a~~le~al~~aL~~~A~w~G~~~~~~~~~i~~n~dF~~~~ld~~~~~ 457 (535) T protein:vir:80 380 G--ANLLVKSGGNRTFGEAQQEEASEQSILSACTKNVSMAFRKALRWANQFQTGIVNDETVEYNLNTDFPAARLTPNERA 457 (535) T ss_pred H--HHhhccCcccccHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHcCCccCCCceEEEeccccccccCCHHHHH Confidence 2 1112111111111211222223345666778888888876542222111 1122333332222222233455 Q ss_pred HHHHHHhCCCCCHHHHHHHhCCC-----CCCCccee-eec-----ccc---cccc-ccc-cccCCCCCCCCCCCCCCC Q lcl|Aclame:pro 365 AYRTGIQGGFLKPNEARSKEDLP-----PEAGGDRL-LVN-----GNM---LPID-MAG-QAYLKGGDTNGEVSKEGN 426 (429) Q Consensus 365 ~~~~~~~~g~~t~NE~R~~~Gl~-----~~~~gD~~-~~~-----~n~---~~~~-~~~-~~~~~~g~~~~~~~~~~~ 426 (429) .+-+++.+|.|+....++.+..- .+++-++. .+. .+. .+.+ ..+ ++..+-.+.++..++.++ T Consensus 458 all~~~~~G~Is~et~~~~L~r~gvl~~~~~~eee~~ri~~E~~~~~~~~g~~~d~~~~g~~~~~~~~~~~~~~~~~~ 535 (535) T protein:vir:80 458 ELILEWQQGAITFKEMRAGLRRAGVASEDDAKAETEGKATVEFIAKTAAAGKVGDAASGGTNKAKLNNGNGGGNQAGN 535 (535) T ss_pred HHHHHHhcCCCCHHHHHHHHHhCCCCCcccchHHHHHHHHhhhhhccccCCCCCCCCCCCCCcCcccCCccccccCCC Confidence 66788889999988887766332 12221111 000 000 0000 000 000011111111122222 No 223 >protein:vir:97376 Length: 320 # NCBI annotation: putative portal protein # Family: family:all:11744 # MgeID: mge:1675 # MgeName: Q54 # Cross-refs: genbank:acc:YP_762589;genbank:gi:115304290;genbank:GeneID:5130579 Probab=95.02 E-value=0.0029 Score=34.51 Aligned_cols=315 Identities=15% Similarity=0.138 Sum_probs=140.6 Q ss_pred CchhhhhhcccccccccccccCCchHHHHHhhcCCCCcceechhhhhccHHHHHHHHHHHHhhccCceEEEecCCceeee Q lcl|Aclame:pro 1 MDSVKKFFNFEKRQTSQVIELNKDDEKLLEWLGISPSTISVKGKNALKVATVFACIKILSESVSKLPLKIYQEDEYGIQR 80 (429) Q Consensus 1 Mg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~~~~ 80 (429) ||||+ +.++..- +. ... ..++.... +..+..+.-..-|.+-+-+|+.||.. +-.|+... T Consensus 1 ~~~~~----~~~~~~~-~~--~~~-~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~----- 59 (320) T protein:vir:97 1 MGIFN----FKKRETL-TP--ELK-ESIIRQVT-------IEDESPFTGTTDFNVRNEVAESIATY-LGAYKTSA----- 59 (320) T ss_pred CCccc----ccccccc-Ch--hHH-hhhhheee-------eccCCCcccccccchhhHHHHHHHHH-hhhhcccc----- Confidence 99875 2232211 00 000 11111000 00000000011111222233333321 01111111 Q ss_pred eecchhhhhhcccCcCCCCHHHHHHHHHHHHHhhCCeEEEEeeCCCCceEEEEeeCCcceEEEEcCCcceeeeeeEEEee Q lcl|Aclame:pro 81 GTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVYIDDVGLLNSKTKMWYVV 160 (429) Q Consensus 81 ~~~~~~~~~l~~~PN~~~s~~~~~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~l~p~~v~~~~~~~~~~~~~~~~~~~~ 160 (429) ....+|.. | ..|.+.++.+.+-....|++.-.+ .| +..-+.-++.-.+.. ..+. T Consensus 60 ----~~~~~~~~--~-----~~~~~~~~~~~~~~~~~~~~~~~~-~~----~~~~~~~~~~~~~~~----------~~~~ 113 (320) T protein:vir:97 60 ----KRLSLLTN--N-----PSFLRRLVKHALHNKTTYVYKSPT-YG----WLITDSMTIEGLRAR----------LTFT 113 (320) T ss_pred ----ceeeeeeC--C-----HHHHHHHHHHhhcccceEEeeCCc-cc----eeeecceeeeeeeee----------EEEe Confidence 11223322 2 368899999999888888776442 22 222221111111100 0000 Q ss_pred cccC----ceEEEccceEEEeecCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHHccCCcceEEEeCCCCC-HHHHH Q lcl|Aclame:pro 161 NTGG----QQRVLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGDLN-EDAKK 235 (429) Q Consensus 161 ~~~g----~~~~~~~~evih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~-~e~~~ 235 (429) .++- .+..++-.|+= -..++.+|.-+-++.. ....+....-+.+.|.+....+++.+.+.. +|-.+ T Consensus 114 ~~D~FN~~V~mtvpfyD~~-----ILdnpl~gv~tqe~gk----M~g~a~~~v~kkL~~~~~IKafi~Tdid~GLee~kD 184 (320) T protein:vir:97 114 LPDPFNSAVTMTVPFYDVG-----IIDSPLVEVDTEEANK----MLEAAYSAVMKKLHNTGAIKAFISSDIDVGLEKMKE 184 (320) T ss_pred cCcccceeEEEEeeeechh-----hhhhhhcccChHHhhH----HHHHHhhhhhhhccccceeEEEEecccchhHHHHHH Confidence 0000 01112222221 1234456666653322 233344555667788899999999887643 55555 Q ss_pred HHHHHHHHHhcccccccceeecCCCceeEecCCChhHHHHHHHHHHHHHHHHHHhcCChhhcCCccccccccHHHHHHHH Q lcl|Aclame:pro 236 VFRENFESMSSGLQNSHRIALMPVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKATLNNIEQQQQQF 315 (429) Q Consensus 236 ~~~~~~~~~~~g~~~~~~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~fgvp~~~l~~~~~~~~~n~~~~~~~~ 315 (429) +.+..+.++..-+.--.++-+++.|-++.++..+..-+. ..-....++..+.-++||..+|-+. ..+.+..+| T Consensus 185 ~~~~kIk~mq~~A~~~nG~T~i~~~dDI~Qi~pDYS~sn-~~D~~l~~t~alS~y~m~~~IL~Gs------Ate~~~Iaf 257 (320) T protein:vir:97 185 ESDSKIKAMLATAELLSGYTYIQRGDDVTQMMPDYTTSN-VTDFAAMRTFAASQLSVSDKILDGS------ATDGEKVAV 257 (320) T ss_pred HHHHHHHHHHHHHHHhcCcccccCCcceeeecccccccc-hhHHHHHHHHHHhhcCCchhhcccc------CCcceeeeh Confidence 665555555433222334678889999999876554432 2334556778888899999998542 355677899 Q ss_pred HHHHHhHHHHHHHHHHHHhhccchhhcchhhhhhhhhhHhhhhHHHHHHHHHHHHhCCCCCHHHHHHHhCCCCCCCccee Q lcl|Aclame:pro 316 YTDTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEAGGDRL 395 (429) Q Consensus 316 ~~~~l~P~~~~i~~~l~~~ll~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~Gl~~~~~gD~~ 395 (429) +...++|++.++.+ ....+.. ...-+|-+.-+ -..|-+..|.+- -.|.+.-|. T Consensus 258 ~~~~V~PLL~Q~~~-~Ek~Lvy------~m~~E~FVs~m---------------tTGG~l~S~~~~-~~~~~~~~~---- 310 (320) T protein:vir:97 258 MFRFVEPILEQFRE-YEPSLIY------AMRDEFFVSFM---------------TTGGMLNSNRVD-GWGKEKAPN---- 310 (320) T ss_pred hhHhHHHHHHHhhh-cCcceee------eeccceeeeee---------------ecCceeeccccc-ccccccCCc---- Confidence 99999999999843 1111111 00111111100 014444444321 012221110 Q ss_pred eeccccccccccccccCCCCCCCCC Q lcl|Aclame:pro 396 LVNGNMLPIDMAGQAYLKGGDTNGE 420 (429) Q Consensus 396 ~~~~n~~~~~~~~~~~~~~g~~~~~ 420 (429) ..+||+..+- T Consensus 311 ---------------~~~~~~~~~~ 320 (320) T protein:vir:97 311 ---------------ESKGGDVGDV 320 (320) T ss_pred ---------------cccCCcccCC Confidence 0122222111 No 224 >protein:vir:97265 Length: 513 # NCBI annotation: hypothetical protein ORF013 # Family: family:all:584 # MgeID: mge:1657 # MgeName: M6 # Cross-refs: genbank:acc:YP_001294521;genbank:gi:149408242;genbank:GeneID:5237130 Probab=94.51 E-value=0.0042 Score=33.60 Aligned_cols=400 Identities=13% Similarity=0.069 Sum_probs=164.1 Q ss_pred CchhhhhhcccccccccccccCCchHHHHHhhcCCC-------Cccee---c----hhh----hhccHHHHHHHHHHHHh Q lcl|Aclame:pro 1 MDSVKKFFNFEKRQTSQVIELNKDDEKLLEWLGISP-------STISV---K----GKN----ALKVATVFACIKILSES 62 (429) Q Consensus 1 Mg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~---~----~~~----a~~~~~v~~~i~~ia~~ 62 (429) |.=-+ +-. -..+..........+..+-+..+++. .+.+- . .+. |.-.+++...++.++.. T Consensus 1 m~~~~-~~~-v~~~h~~y~a~~~~W~~ird~~~G~~~~r~~g~~YLPk~~~E~~~~Y~~rl~rA~~~n~~~~tl~~l~G~ 78 (513) T protein:vir:97 1 MADKD-PKS-PATTSGAYDQMLPRWHVIETLLGGTEAMREAGETYLPRHQEETDKGYQERLASAVLLNMVEQTLDTLSGK 78 (513) T ss_pred CCCCC-CCC-CCcCCHHHHHHHHHHHHHHHHhcChHHHHhhcccCCCCCCCCCHHHHHHHHhcccCCChHHHHHHHHhhh Confidence 21110 000 00000000001111122222222221 01100 0 111 22235556666666655 Q ss_pred hccCceEEEecCCceeeeeecchhhh-hhcccCcCCCCHHHHHHHHHHHHHhhCCeEEEEeeCCCCce------------ Q lcl|Aclame:pro 63 VSKLPLKIYQEDEYGIQRGTKHYLNN-LLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKV------------ 129 (429) Q Consensus 63 ia~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~PN~~~s~~~~~~~~~~~~l~~G~~~~~~~~~~~g~~------------ 129 (429) +.+-|..+-. .....+.. ++...--...+-.+|.+.++...+.+|-+++++.....+.+ T Consensus 79 vf~k~p~~~~--------~~p~~~~~~l~~d~D~~G~~L~~f~~~~~~~~l~~G~~~ilVD~P~~~~~~~~~~~T~Ade~ 150 (513) T protein:vir:97 79 PFSEPIKLNE--------DVPKAIEETILPDVDLQGNNLDVFARQWFREGMAKALCHVLIDMPRPAPREDGQPRTLADDR 150 (513) T ss_pred hhhcCcccCc--------CchHHHHHHHhhccCCCCCCHHHHHHHHHHHHHhcCeEEEEEecCCCCCccchhHHhHHHHH Confidence 5554443310 11123433 34334456678899999999999999999999976543211 Q ss_pred -----EEEEeeCCcceE--------------------EEEcCCcceeeeeeEEEeecccCceEE---------------- Q lcl|Aclame:pro 130 -----QALWPIDASKVT--------------------VYIDDVGLLNSKTKMWYVVNTGGQQRV---------------- 168 (429) Q Consensus 130 -----~~l~~l~p~~v~--------------------~~~~~~~~~~~~~~~~~~~~~~g~~~~---------------- 168 (429) .-+..+.|..|- .+.+.++........++... .|..+. T Consensus 151 ~~~~rPy~~~~~~e~IinW~~~~v~G~~~L~~v~l~E~~~~~Dgf~~~~~~q~rvL~-~g~~~v~r~~~~~~~~~~e~~~ 229 (513) T protein:vir:97 151 REGLRPYWVMIKPECLLFARSEVINGVEVLQHVRIIEHYMEQDGFAEVCKRRIRVLE-PGLVQLWEPVKKSNAQKEEWAL 229 (513) T ss_pred hhccCceEEEecHhhhcCcceeccCcceeeeeEEEEEEEeecCCCcceEEEEEEEEe-CceEEEEEeecCCCccccceEE Confidence 123334433331 01111111111111111111 111110 Q ss_pred -------EccceEEEeecCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHHccCCcceEEEeCCCCCHHHHHHHHHHH Q lcl|Aclame:pro 169 -------LKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGDLNEDAKKVFRENF 241 (429) Q Consensus 169 -------~~~~evih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~~e~~~~~~~~~ 241 (429) +..-.++.+- ....+...|.+|+..++..-........-....+...+.|..++.--.. +..+ T Consensus 230 ~~~g~~~l~~IP~v~~~-~~~~~~~~~~pPLl~LA~ln~~hy~~~Sd~~~il~~~~~P~l~~~G~~~---~~~~------ 299 (513) T protein:vir:97 230 ADEWATGLNYVPLVTFY-ADRQGFMMGKPPLLDLAHLNVAHWQSASDQRHILTVSRFPILACSGASG---EDSD------ 299 (513) T ss_pred ecCCCCcCCceeEEEEe-cCCCCCCCCccchHHHHHHHHHHHhhhhhHHHHHHhcccceeeeecCCc---CCCC------ Confidence 0111122221 2223445678888776665544444444445556667788777763211 1100 Q ss_pred HHHhcccccccceeecCC-C--ceeEecCCChhHHHHHHHHHHHHHHHHHHhcCChhhcCCccccccccHHHHHHHHHHH Q lcl|Aclame:pro 242 ESMSSGLQNSHRIALMPV-G--YQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKATLNNIEQQQQQFYTD 318 (429) Q Consensus 242 ~~~~~g~~~~~~~~vl~~-g--~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~fgvp~~~l~~~~~~~~~n~~~~~~~~~~~ 318 (429) ...-|+ ..++.+++ | ..|.+.+-+..+.. .+..+....++ ...| ..+|........+........-..+ T Consensus 300 -~i~iG~---~~~~~lpe~~~~~~yie~~g~~i~~~-~~~l~~le~qm-~~~G--a~ll~~~~~~~Ta~a~~~~~~~~~S 371 (513) T protein:vir:97 300 -PVVVGP---NKVLYNPDPAGRFYYVEHTGQAIAAG-RTDLKDLEEQM-AGYG--AEFLKRKTGGQTATARALDSAEATS 371 (513) T ss_pred -ceEeec---cccccCCCCCCcceeeccCchhHHHH-HHHHHHHHHHH-HHHH--HHhhccCCccccHHHHHHHHHHHHH Confidence 122333 34566764 4 45555554433332 23333333343 3333 2233222212222333334444556 Q ss_pred HHhHHHHHHHHHHHHhhccchhhc----chhhhhhhhhhHhhhhHHHHHHHHHHHHhCCCCCHHHHHHHh---CC-CCCC Q lcl|Aclame:pro 319 TLQATLTMYEQEMTYKLFLDSELD----KGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKE---DL-PPEA 390 (429) Q Consensus 319 ~l~P~~~~i~~~l~~~ll~~~~~~----~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~---Gl-~~~~ 390 (429) .|.-++..+++.|++.+-.-..+. .+..|..+.+-....-.....+++.+++.+|.|+....++.+ |. +|.. T Consensus 372 ~L~~~a~~le~al~~~l~~~a~wlg~~~~~~~v~in~dF~~~~~~~~~~~al~~a~~~G~is~~t~~~~L~r~gvl~~d~ 451 (513) T protein:vir:97 372 DLSAMTGLFEDALAQALDITADWLRLGPNGGTVELVKDYDLEEMDAPGLQALQVAREKRDISRKTYLNGLRLRGVLPEDF 451 (513) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCCCccEEEeccccCcccCCHHHHHHHHHHHhCCCCCHHHHHHHHHhccCCCccC Confidence 667788888888877652221111 122333333222222223445677788899999887776654 22 2211 Q ss_pred C-----c---ceeeecccc--ccccccccccCCCCCCCCCCCCCCCCCC Q lcl|Aclame:pro 391 G-----G---DRLLVNGNM--LPIDMAGQAYLKGGDTNGEVSKEGNEGN 429 (429) Q Consensus 391 ~-----g---D~~~~~~n~--~~~~~~~~~~~~~g~~~~~~~~~~~~~n 429 (429) . . ++..-.... .+.+...+...++++.+++.+++++||- T Consensus 452 d~~~~~e~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 500 (513) T protein:vir:97 452 DEDEDWEELMEEISEAMGRAGLDLDPAQKNPPEGGEGEGEGEGEGGEGG 500 (513) T ss_pred CHHHHHHHHHHhhhhccCCCCccccccCCCCCCCCCCCCCCCCCCCCCC Confidence 1 0 100000000 0111112222334444444444444433 No 225 >protein:vir:104500 Length: 537 # NCBI annotation: gp20 # Family: family:all:1036 # MgeID: mge:1548 # MgeName: P-SSM4 # Cross-refs: genbank:acc:YP_214665;genbank:gi:61806306;genbank:GeneID:3294555 Probab=93.23 E-value=0.0083 Score=32.00 Aligned_cols=420 Identities=12% Similarity=0.139 Sum_probs=170.3 Q ss_pred hhhhhhcccccc-----ccccc-cc-CCchHH--HHH-hhcCC---CCccee------chhhhhccHHHHHHHHHHHHhh Q lcl|Aclame:pro 3 SVKKFFNFEKRQ-----TSQVI-EL-NKDDEK--LLE-WLGIS---PSTISV------KGKNALKVATVFACIKILSESV 63 (429) Q Consensus 3 ~~~~~~~~~~~~-----~~~~~-~~-~~~~~~--~~~-~~~~~---~~~~~~------~~~~a~~~~~v~~~i~~ia~~i 63 (429) .-..+|++.-.. +.... +. +..... ... ..|.. ...... ..+....+|.|-+||+.|.+.+ T Consensus 1 ~~~~lfg~~i~~~~~~~~~~s~~~~~~~dg~~~~~~~~~~g~~~~~e~~~~~~~eLI~~YR~ma~~pEvd~Av~eIVnea 80 (537) T protein:vir:10 1 MAQQLFGFSLQRAKKVPKGPSFVQKDSLDGSQPIVGGGYFGYSVDFDGTIRNDHELITRYREMVLNPECDSAVDDVVNET 80 (537) T ss_pred CccccccceeecccccccCCcccCCCcccccceeecccccccccccccccchHHHHHHHHHHHhhccchhhHHHHhhcce Confidence 224566643321 11111 11 111010 001 11100 000110 1344567899999999999876 Q ss_pred ccC-----ceEEEecCCce---eeeeecchhhhhhcccCcCCCCHHHHHHHHHHHHHhhCCeEEEEeeCCC---CceEEE Q lcl|Aclame:pro 64 SKL-----PLKIYQEDEYG---IQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRK---GKVQAL 132 (429) Q Consensus 64 a~~-----~~~~~~~~~~~---~~~~~~~~~~~~l~~~PN~~~s~~~~~~~~~~~~l~~G~~~~~~~~~~~---g~~~~l 132 (429) .-+ |+.+.-.+-+. ........+.++|+. -+....+ ..+++.|.+.|..|..++.+.. .-..+| T Consensus 81 iv~d~~~~pV~i~Ld~~~~s~~iK~kI~eEF~~Il~l-l~F~~~~----~e~fR~WYVDgRi~fhKiid~k~pk~GI~EL 155 (537) T protein:vir:10 81 ICGNFDDVPISIDLHNLKQSEKIKKLIRSEFDEILRL-LDFDNRA----YEIFRRWYVDGRLFFHKVIDPKKPRQGLVEL 155 (537) T ss_pred eEecCCCceEEEEecccccchHHHHHHHHHHHHHHHH-hccchhh----hHHHhhheeeeEEEEEEEEeCCCccccceee Confidence 432 22222111110 001111223344431 2222333 4456677888999998876533 237899 Q ss_pred EeeCCcceEEEEcC-----Ccce--------eeeeeEEEeecc------cCceEEEccceEEEeecC-CCCCcccccCHH Q lcl|Aclame:pro 133 WPIDASKVTVYIDD-----VGLL--------NSKTKMWYVVNT------GGQQRVLKPEEILHFKNG-ITLDGLVGVPTM 192 (429) Q Consensus 133 ~~l~p~~v~~~~~~-----~~~~--------~~~~~~~~~~~~------~g~~~~~~~~evih~~~~-~~~~~~~G~s~~ 192 (429) ..|+|..++.++.- .... ......|+.+.. .+....++.+-|.+...+ -..+....+|-| T Consensus 156 r~lDPr~i~~vR~i~~~~~~~~~~~~~~~~v~~~~~eyf~ynp~g~~~~~~~~vkI~~dAI~y~hSGl~d~n~~~i~syL 235 (537) T protein:vir:10 156 RYVDPRKIRKVTEYEAKRPEALRTQDLNQQLTQQSASYFLYNPKGLKNSTNQGMKIAPDSIAYCHSGIQDLNKNMVLSHL 235 (537) T ss_pred eeeCCccceeeEeecccCCccceEEecceeeeecccceeeeccccccccCCCceeccHhheeeecccceeCCCCeeeeee Confidence 99999999765441 1111 001111233332 233455666444333322 223345677888 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHccCCcceEEEeCC-CCCHHHHHHHHHHHHHHhcc----cccccce-------eec--- Q lcl|Aclame:pro 193 EYLKSTLENSASADKFINNFYKQGLQVKGLVQYVG-DLNEDAKKVFRENFESMSSG----LQNSHRI-------ALM--- 257 (429) Q Consensus 193 ~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~-~~~~e~~~~~~~~~~~~~~g----~~~~~~~-------~vl--- 257 (429) ..|.+.+....-++...--+--..+.-.-+.-++. .+.+.-+++..+.+...|+. ....|.+ ..+ T Consensus 236 hkAiKp~NQLkm~EDAlVIYRitRAPeRRvFYIDVGnLPk~KAeqYlr~iM~k~KNklVYDa~TGev~ddrk~msMlEDy 315 (537) T protein:vir:10 236 HKAIKAVNQLRMIEDSLVIYRLSRAPERRIFYIDVGNLPKNKAEQYLREVMGRYRNKLVYDANTGEIKDDKKFMSMLEDF 315 (537) T ss_pred hhhhHHHHhhHHHHhhHHHHhhhccccceEEEEecCCCCchhHHHHHHHHHHhccceEEEeccCceecccchhhhhhhhh Confidence 88888887766666555444444455555555553 34444444444444444431 0111221 112 Q ss_pred -------CCCceeEecCCChhHHHHHHHHHHHHHHHHHHhcCChhhcCCccccccccHHHH------HHHHHHHHHhHHH Q lcl|Aclame:pro 258 -------PVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKATLNNIEQQ------QQQFYTDTLQATL 324 (429) Q Consensus 258 -------~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~fgvp~~~l~~~~~~~~~n~~~~------~~~~~~~~l~P~~ 324 (429) ..|.+++.|.-. +.+.-++-..+..+.+.++++||.+-|...+..+.....+- ...|+..-=.-+. T Consensus 316 WLPRReGgrgTEItTLpGg-qnlgem~DV~YF~kKLy~aLnVP~SRl~~e~~f~~Gr~~EItRDEiKF~KFI~RLR~rFs 394 (537) T protein:vir:10 316 WLPRREGGRGTEISTLPGG-QNLGELEDVKYFQKKLYKALNVPSSRLETETTFNIGRAAEITRDEVKFQKFIARLRKRFS 394 (537) T ss_pred cccccCCCcccceeecccc-CCcChHHHHHHHHHHHHHHhCCCccccCCCCcccccccchhhHHHHHHHHHHHHHHHHHH Confidence 136777776432 22333355677789999999999999865443332222121 1222222222233 Q ss_pred HHHHHHHHHhhccc-----hhhcc---hhhhhhhhhhH----hhhh-HHHHHHHHHHHH--hCCCCCHHHHHH-HhCC-- Q lcl|Aclame:pro 325 TMYEQEMTYKLFLD-----SELDK---GFYSKFNVDAI----LRAD-IKTRYEAYRTGI--QGGFLKPNEARS-KEDL-- 386 (429) Q Consensus 325 ~~i~~~l~~~ll~~-----~~~~~---~~~~~fd~~~l----~~~d-~~~~~~~~~~~~--~~g~~t~NE~R~-~~Gl-- 386 (429) ..|.+.|.+.|..+ .++.. .+++.|..|.. .... +..|...+..+- -+-.++.+=||+ .|.+ T Consensus 395 ~lF~~~Lk~qLilKgiit~eeW~~i~~~I~~~f~~Dn~f~ElKe~Eil~~Rl~~l~~~dpyvGky~s~dyi~k~ILr~tD 474 (537) T protein:vir:10 395 ELFVDLLKTQLILKGICSIEEWEEMKEHIQFDFIADNYFTELKEIEIRNERMNEVAQMDPYVGKYFSANYIRTKVLKQTE 474 (537) T ss_pred HHHHHHHHHhhhhccCCCHHHHHHHhhcceEEeeecchHHHHHHHHHHHHHHHHHHHhhhhhhcccchHHHHHHHhccCH Confidence 33444444443222 22211 12233322221 1111 123333332221 111223333332 1222 Q ss_pred ------------------CCCCCccee-eec-cccccccccc-cccCCCCCCCCCCCCCCCCC Q lcl|Aclame:pro 387 ------------------PPEAGGDRL-LVN-GNMLPIDMAG-QAYLKGGDTNGEVSKEGNEG 428 (429) Q Consensus 387 ------------------~~~~~gD~~-~~~-~n~~~~~~~~-~~~~~~g~~~~~~~~~~~~~ 428 (429) -+.|..+.- -.+ ....|++..+ ++...+.........+++|= T Consensus 475 eeI~~~~k~I~~E~k~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 537 (537) T protein:vir:10 475 SEIKEIDKEIKQEIADGVIMDPQAMQAMEMGIGDEEPVPEGGEEPQTDPNSAVSPADQKRGEL 537 (537) T ss_pred HHHHHHHHHHHHHhhCCCCCCcccccccccCCCCcccCCCCCCCcccCCccCCCCCCccCCCC Confidence 111211000 000 0001111000 00000000000001111111 No 226 >protein:vir:103177 Length: 533 # NCBI annotation: gp131 # Family: family:all:1036 # MgeID: mge:1583 # MgeName: Syn9 # Cross-refs: genbank:acc:YP_717798;genbank:gi:113200635;genbank:GeneID:4239186 Probab=93.16 E-value=0.0085 Score=31.92 Aligned_cols=420 Identities=13% Similarity=0.140 Sum_probs=175.6 Q ss_pred Cchhhhhhccccccc--ccccc-c----CCchHHHHHhhcCCCCccee------------chhhhhccHHHHHHHHHHHH Q lcl|Aclame:pro 1 MDSVKKFFNFEKRQT--SQVIE-L----NKDDEKLLEWLGISPSTISV------------KGKNALKVATVFACIKILSE 61 (429) Q Consensus 1 Mg~~~~~~~~~~~~~--~~~~~-~----~~~~~~~~~~~~~~~~~~~~------------~~~~a~~~~~v~~~i~~ia~ 61 (429) |+ .+|++.-+.. +.... . ..+........+.....+.+ ..+....+|.|-+||+.|.+ T Consensus 1 m~---~lfg~~i~~~~~~~~~~s~~~~~~~dg~~~i~~~~~~~~~~~~e~~~~~~~eLI~~YR~ma~~pEvd~Av~eIVn 77 (533) T protein:vir:10 1 MS---QLFGFSLERAKKAPKGPSFVQKDNLDGSQPVSGGGYYGYTVDFDGQVRNEYQLISRYREMVLQPECDSAVDDIVN 77 (533) T ss_pred Cc---cccccccccccccccCCCCCCCCcccccceeecccccceeeecccccchHHHHHHHHHHHhhccchhhHHHHhhc Confidence 54 4566543321 11111 1 00111000000011111111 12445678999999999998 Q ss_pred hhccC-----ceEEEecCCc---eeeeeecchhhhhhcccCcCCCCHHHHHHHHHHHHHhhCCeEEEEeeCCC---CceE Q lcl|Aclame:pro 62 SVSKL-----PLKIYQEDEY---GIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRK---GKVQ 130 (429) Q Consensus 62 ~ia~~-----~~~~~~~~~~---~~~~~~~~~~~~~l~~~PN~~~s~~~~~~~~~~~~l~~G~~~~~~~~~~~---g~~~ 130 (429) .+.-+ |+.+.-.+-+ .........+.++|+. -+....+ ..+++.|.+.|..|..++.+.. .-.. T Consensus 78 eaiv~d~~~~pV~i~Ld~~~~s~~iK~kI~eEF~~Il~l-l~F~~~~----~e~fR~WYVDgRi~fHkiid~~~pk~GI~ 152 (533) T protein:vir:10 78 ETICGNFDDVPVSVELSNLKVSDKIKKLIREEFGEILRL-LDFENRS----YEIFRRWYVDGRLFYHKVIDPDNPQGGLI 152 (533) T ss_pred ceeeecCCCceEEEEecccccchHHHHHHHHHHHHHHHH-hccchhh----hHHHhhhhhcceEEEEEEecCCCccccce Confidence 76432 2222211100 0000111223334431 2222333 3456667788999998876633 3488 Q ss_pred EEEeeCCcceEEEEcC-----Ccc--------eeeeeeEEEeeccc------CceEEEccceEEEeecCC-CCCcccccC Q lcl|Aclame:pro 131 ALWPIDASKVTVYIDD-----VGL--------LNSKTKMWYVVNTG------GQQRVLKPEEILHFKNGI-TLDGLVGVP 190 (429) Q Consensus 131 ~l~~l~p~~v~~~~~~-----~~~--------~~~~~~~~~~~~~~------g~~~~~~~~evih~~~~~-~~~~~~G~s 190 (429) +|..|+|..|+.++.- +.. .......|+.+... +....++.+-|.+...+. +.+...-+| T Consensus 153 ELr~lDPr~i~~vr~i~~~~~~~~~~~~~~~~v~~~~~eyf~Ynp~g~~~~~~~~vkI~~dAI~y~hSGl~d~~~~~i~s 232 (533) T protein:vir:10 153 ELRYIDPRKIRKINETEQKRPEQLRGLPLNQQLSPKSAEYFLYDPKGLKNSTTQGLKIAPDSICYVHSGIMDLNKNMTLS 232 (533) T ss_pred eeeeccccceeeeeeeeccCCCccceeecchhhhccceeeeeeccccccccCCCceecchhheeeeeccceeCCCCceec Confidence 9999999999875432 111 11122223444433 233456665444433221 222233457 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHccCCcceEEEeCC-CCCHHHHHHHHHHHHHHhcc----cccccce-------eec- Q lcl|Aclame:pro 191 TMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVG-DLNEDAKKVFRENFESMSSG----LQNSHRI-------ALM- 257 (429) Q Consensus 191 ~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~-~~~~e~~~~~~~~~~~~~~g----~~~~~~~-------~vl- 257 (429) -|..|.+.+....-++...--+--..+.-.-+.-++. .+.+.-+++..+.+...|+. ....|.+ ..| T Consensus 233 yLhkAiKp~NQLkm~EDAlVIYRitRAPeRRvFYIDVGnLPk~KAeqYlr~iM~k~KNklVYDa~TGev~ddrk~msMlE 312 (533) T protein:vir:10 233 HLHKAIKAVNQLRMIEDSLVIYRLSRAPERRIFYIDVGNLPKNKAEQYLREVMGRYRNKLVYDANTGEIKDDKKFMSMLE 312 (533) T ss_pred cchHhHHHHHhhHHHHhhHHHHhhhccccceEEEEecCCCCchhHHHHHHHHHHhccceEEEeccCceecccchhhhhHh Confidence 7888888777666555554444334455555555553 34444444444444444431 0111221 112 Q ss_pred ---------CCCceeEecCCChhHHHHHHHHHHHHHHHHHHhcCChhhcCCccccccccHHHH------HHHHHHHHHhH Q lcl|Aclame:pro 258 ---------PVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKATLNNIEQQ------QQQFYTDTLQA 322 (429) Q Consensus 258 ---------~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~fgvp~~~l~~~~~~~~~n~~~~------~~~~~~~~l~P 322 (429) ..|.+++.|.-. +.+.-++-..+..+.+.++++||.+-|...+..+.....+- ...|+..-=.- T Consensus 313 DyWLPRReGgrgTEItTLpGg-qnLgem~DV~YF~kKLY~aLnVP~SRl~~e~~f~~Gr~~EItRDEiKF~KFI~RLR~r 391 (533) T protein:vir:10 313 DFWLPRREGGRGTEITTLPGG-QNLGELEDVKYFQKKLYKSLNVPGSRLETETTFNVGRAAEITRDEVKFQKFVARLRKR 391 (533) T ss_pred hhcccccCCCCccceeecccc-CCcChHHHHHHHHHHHHHHhCCCccccCCCCcccccccchhhHHHHHHHHHHHHHHHH Confidence 136777776432 22333455677789999999999999865443332222121 12222222222 Q ss_pred HHHHHHHHHHHhhccc-----hhhcc---hhhhhhhhhhH----hhh-hHHHHHHHHHHH--HhCCCCCHHHHHH-HhCC Q lcl|Aclame:pro 323 TLTMYEQEMTYKLFLD-----SELDK---GFYSKFNVDAI----LRA-DIKTRYEAYRTG--IQGGFLKPNEARS-KEDL 386 (429) Q Consensus 323 ~~~~i~~~l~~~ll~~-----~~~~~---~~~~~fd~~~l----~~~-d~~~~~~~~~~~--~~~g~~t~NE~R~-~~Gl 386 (429) +...|.+.|.+.|..+ .++.. .+++.|..|.. ... -+..|...+..+ +-+..++.+=+|+ .|.+ T Consensus 392 Fs~lF~~~Lk~qLiLKgiit~eeW~~i~~~I~~~f~~Dn~f~ElKe~Eil~~Rl~~l~~~dpyvGky~S~dyi~k~ILr~ 471 (533) T protein:vir:10 392 FSELFTDLLKTQLVLKGVISIEEWDQMKEHIQYDYIADNYFAELKEIEIRNERMNQVATMDPFVGKYFSVEYMRRQVLKQ 471 (533) T ss_pred HHHHHHHHHHHhhhhccCCCHHHHHHHhhcceEeeeecchHHHHHHHHHHHHHHHHHHHhhhhhccccchHHHHHHHhcc Confidence 3334444444443322 22211 12233322221 111 122333333332 1112234444433 2332 Q ss_pred CCCC----------Ccce-eee-c-cccccccccccccC---CCCCCCCCCCCCCCCCC Q lcl|Aclame:pro 387 PPEA----------GGDR-LLV-N-GNMLPIDMAGQAYL---KGGDTNGEVSKEGNEGN 429 (429) Q Consensus 387 ~~~~----------~gD~-~~~-~-~n~~~~~~~~~~~~---~~g~~~~~~~~~~~~~n 429 (429) ...+ ..+. ++. | ..+.|.....++.. .+++...+.+.+..|-- T Consensus 472 tDeei~~~~kqI~~E~k~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 530 (533) T protein:vir:10 472 TDVEMKEIDKQIESEMESGIIADPAAEMDPAMAAGDPDAGGAPAEEVAPEGPDPSDERK 530 (533) T ss_pred CHHHHHHHHHHHHHHHhCCCCCCCcchhhHHhcCCCCCcCCcccccCCCCCCCcchhhc Confidence 2110 0000 000 0 11112222221111 12222333333333333 No 227 >protein:vir:104892 Length: 558 # NCBI annotation: T4-like capsid assembly protein # Family: family:all:1036 # MgeID: mge:1630 # MgeName: P-SSM2 # Cross-refs: genbank:acc:YP_214363;genbank:gi:61806003;genbank:GeneID:3294412 Probab=93.10 E-value=0.0088 Score=31.86 Aligned_cols=418 Identities=11% Similarity=0.117 Sum_probs=167.7 Q ss_pred Cchhhhhhccccccc-------ccccccCCchHHHHHhh--cCCCCcce-----e-------chhhhhccHHHHHHHHHH Q lcl|Aclame:pro 1 MDSVKKFFNFEKRQT-------SQVIELNKDDEKLLEWL--GISPSTIS-----V-------KGKNALKVATVFACIKIL 59 (429) Q Consensus 1 Mg~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~--~~~~~~~~-----~-------~~~~a~~~~~v~~~i~~i 59 (429) |+- +|++..+.. .++++....+.. .... |.....+. - ..+..+.+|.|-.||+.| T Consensus 1 m~~---lfgf~~~~~~~~~~~~~s~~~p~~ddg~-~~~~~~g~~~~~~~~~~~~~~~~eLI~~YR~ma~~pEvd~Av~eI 76 (558) T protein:vir:10 1 MAK---LFGFSIEETQKKSTSIISPVPKNNEDGV-DNFISSGFYGQYVDIEGAYRSEYDLIRRYREMALHPEADGAIEDV 76 (558) T ss_pred Ccc---hhcchhhhhhhhccCCccccCCCccccc-cceeccceeeeeecccchhhhHHHHHHHHHHHhhccchhhHHHHh Confidence 443 455433111 111111111111 0000 00000000 0 124456789999999999 Q ss_pred HHhhccC-----ceEEEecCCce---eeeeecchhhhhhcccCcCCCCHHHHHHHHHHHHHhhCCeEEEEeeCCC---Cc Q lcl|Aclame:pro 60 SESVSKL-----PLKIYQEDEYG---IQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRK---GK 128 (429) Q Consensus 60 a~~ia~~-----~~~~~~~~~~~---~~~~~~~~~~~~l~~~PN~~~s~~~~~~~~~~~~l~~G~~~~~~~~~~~---g~ 128 (429) .+.+.-+ |+.+.-.+-+. ........+.++|+. ++...--..+++.|.+.|..|..++.+.. .- T Consensus 77 Vneaiv~d~~~~pV~i~Ld~~~~s~~iK~kI~eEF~~Il~l-----l~F~~~~~e~fR~WYVDgRiyfHKiid~k~pk~G 151 (558) T protein:vir:10 77 VNEAIVSDLYDSPVEVELSNLNASNTLKKKIREEFRYIKEM-----MDFDKKSHEIFRNWYVDGRVFYLKVIDTKNPQEG 151 (558) T ss_pred hcceeEecCCCceEEEEecccCcchHHHHHHHHHHHHHHHH-----hccchhhhHHHhhheeeeEEEEEEEEeCCCcccc Confidence 9876422 22221111110 011111223344432 22222334556677888999998876533 23 Q ss_pred eEEEEeeCCcceEEEEcCCcc-----------------eeeeeeEEEeecccC-------------ceEEEccceEEEee Q lcl|Aclame:pro 129 VQALWPIDASKVTVYIDDVGL-----------------LNSKTKMWYVVNTGG-------------QQRVLKPEEILHFK 178 (429) Q Consensus 129 ~~~l~~l~p~~v~~~~~~~~~-----------------~~~~~~~~~~~~~~g-------------~~~~~~~~evih~~ 178 (429) ..+|..|+|..|+.++.-... .......+|.|...+ ....++.+-|.+.. T Consensus 152 I~ELr~lDPr~i~~Vr~i~~~~~~~~~~~~~~~~~~~~~~~~~~eyy~Y~~~~~~~~~~~~~~~~~~~vkI~~dAI~y~h 231 (558) T protein:vir:10 152 IQDLRYIDPLKIKFIRQEKRKPGNQDPAIRVRSEQDVVPNPEFEEFYIYTPKVQHPTGMVGQMGGKNSIKIAKDSITMCT 231 (558) T ss_pred ceeeeeeCcccceeeeeeccccccccceeeeecccceeeccceeEeeeecCCcccccccceeecCCCceeechhheeeec Confidence 789999999999765542100 001122233333322 22334444443333 Q ss_pred cCC-CCCcccccCHHHHHHHHHHHHHHHHHHHHHHHHccCCcceEEEeCC-CCCHHHHHHHHHHHHHHhcc----ccccc Q lcl|Aclame:pro 179 NGI-TLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVG-DLNEDAKKVFRENFESMSSG----LQNSH 252 (429) Q Consensus 179 ~~~-~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~-~~~~e~~~~~~~~~~~~~~g----~~~~~ 252 (429) .+- ..+...-+|-|..|.+.+....-++...--+--..+.-.-+.-++. .+.+.-+++..+.+...|+. ....| T Consensus 232 SGL~d~~~~~i~syLhkAIKp~NQLkmlEDAlVIYRitRAPERRvFYIDVGnLPk~KAeqYlr~iM~k~KNklVYDa~TG 311 (558) T protein:vir:10 232 SGLVDRNKNRVLSYLHKAIKALNQLRMIEDSLVIYRLSRAPERRIFYIDVGNLPKVKAEQYLKEVMSRYRNKLVYDANTG 311 (558) T ss_pred ccceecCCCeeeecchHhhHhHHhhHHHHhhHHHHhhhccccceEEEEecCCCCchhHHHHHHHHHHhccceEEEeccCc Confidence 211 1123344567888877777666555554444334455455555553 34444444444444444431 01112 Q ss_pred ce-------eec----------CCCceeEecCCChhHHHHHHHHHHHHHHHHHHhcCChhhcCCccccccccHHHH---- Q lcl|Aclame:pro 253 RI-------ALM----------PVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKATLNNIEQQ---- 311 (429) Q Consensus 253 ~~-------~vl----------~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~fgvp~~~l~~~~~~~~~n~~~~---- 311 (429) .+ ..+ ..|.+++.|.-.- .+.=++-..+..+.+.++++||.+-|...+..+.....+- T Consensus 312 ev~ddrk~msMlEDyWLpRReGgrgTEItTLpGgq-nLgem~DV~YF~kKLy~aLnVP~SRl~~e~~f~~Gr~~EItRDE 390 (558) T protein:vir:10 312 EVRDDRKFMSMMEDFWLPRREGGRGTEITTLPGGQ-NLGELSDVDYFQKKLYRALGVPESRIAAEGGFNLGRSSEILRDE 390 (558) T ss_pred eecccchhhhhHhhhcccccCCCCccceeeccccC-CcchHHHHHHHHHHHHHHhCCCccccCCCCcccccccchhhHHH Confidence 21 112 1367777765331 2222345667789999999999999875443333222221 Q ss_pred --HHHHHHHHHhHHHHHHHHHHHHhhccc-----hhhcc---hhhhhhhhhhH----hhh-hHHHHHHHHHHHHh--CCC Q lcl|Aclame:pro 312 --QQQFYTDTLQATLTMYEQEMTYKLFLD-----SELDK---GFYSKFNVDAI----LRA-DIKTRYEAYRTGIQ--GGF 374 (429) Q Consensus 312 --~~~~~~~~l~P~~~~i~~~l~~~ll~~-----~~~~~---~~~~~fd~~~l----~~~-d~~~~~~~~~~~~~--~g~ 374 (429) ...|+..-=.-+...|.+.|.+.|..+ .++.. .+++.|..|.. ... -+..|...+..+-. +-. T Consensus 391 iKF~KFI~RLR~rFs~lF~~~Lk~qLilKgiit~eeW~~i~~~I~~~f~~Dn~f~ElKe~Eil~~Rl~~l~~~dpyvGky 470 (558) T protein:vir:10 391 LKFAKFVGRLRKRFAAMFNDMLKTQLVLKNIVTPEDWKTMEDHIQYDFLYDNQFAELKESELMEGRLGMLATIEPYIGKY 470 (558) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCHHHHHHHhhcceEEeeecchHHHHHHHHHHHHHHHHHHHhhhhhccc Confidence 122222222223334444444443322 22211 12233322221 111 11233333322211 122 Q ss_pred CCHHHHHH-HhCCC--------------------CCCCcceeeecccccccc-ccccccCCCCCCCCCCCCCCCCCC Q lcl|Aclame:pro 375 LKPNEARS-KEDLP--------------------PEAGGDRLLVNGNMLPID-MAGQAYLKGGDTNGEVSKEGNEGN 429 (429) Q Consensus 375 ~t~NE~R~-~~Gl~--------------------~~~~gD~~~~~~n~~~~~-~~~~~~~~~g~~~~~~~~~~~~~n 429 (429) ++.+=||+ .|.+. +.|.....+ ..+..|-. .+......+...+.+....+.+.+ T Consensus 471 ~S~dyi~k~ILr~tDeeI~~~~kqI~~E~k~~~~~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 546 (558) T protein:vir:10 471 YSTEYVRKRVLRQTDMEIEEIDTQIEDEIQKGIIPDPSQIDPI-TGEPLPQEGDPAMEGMGEQPVDPDLEAQAQAVD 546 (558) T ss_pred cchHHHHHHHhccCHHHHHHHHHHHHHHHhCCCCCCccccChh-hccccCccCCchhccCCCCCcccccccchhhhh Confidence 34443432 22221 112111111 01111110 000000000111111111111111 No 228 >protein:vir:102330 Length: 451 # NCBI annotation: putative portal protein # Family: family:all:125 # MgeID: mge:1566 # MgeName: phi CD119 # Cross-refs: genbank:acc:YP_529555;genbank:gi:90592641;genbank:GeneID:3974462 Probab=92.34 E-value=0.012 Score=31.16 Aligned_cols=380 Identities=8% Similarity=0.014 Sum_probs=162.9 Q ss_pred Cch--hhhhhcccccccccc---cccCCchHHHHH----hhcCCCCcceechhhhhccHHHHHHHHHHHHhhccCceEEE Q lcl|Aclame:pro 1 MDS--VKKFFNFEKRQTSQV---IELNKDDEKLLE----WLGISPSTISVKGKNALKVATVFACIKILSESVSKLPLKIY 71 (429) Q Consensus 1 Mg~--~~~~~~~~~~~~~~~---~~~~~~~~~~~~----~~~~~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~ 71 (429) |.+ +.++........... .........+.. ..+.. ......+..=+.+....-+|+..+..+-+-|+... T Consensus 1 l~~~~i~~~i~~~~~~~~r~~~~~~YY~g~~~i~~~~~~~~~~~-~~~~~~~~~ki~~n~~~~Ivd~~~~yl~G~p~~~~ 79 (451) T protein:vir:10 1 MELEKIRAIISADAARRQEILQAKSYYYNKNDILKKGVVVQNRD-ENPLRNADNRISHNFHEILVDEKASYMFTYPVLFD 79 (451) T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHhcccCccccccccccccc-cccccccccccccchHHHHHHhhhhheecccceee Confidence 111 111111000000000 000000000000 00000 00000000011245556677888888877777654 Q ss_pred ecCCceeeeeecchhhhhhcccCcCCCCHHHHHHHHHHHHHhhCCeEEEEeeCCCC-------ceEEEEeeCCcceEEEE Q lcl|Aclame:pro 72 QEDEYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKG-------KVQALWPIDASKVTVYI 144 (429) Q Consensus 72 ~~~~~~~~~~~~~~~~~~l~~~PN~~~s~~~~~~~~~~~~l~~G~~~~~~~~~~~g-------~~~~l~~l~p~~v~~~~ 144 (429) ..+.+.. ..+...+. + | ........+..+.+.+|.||.++.++... ....+..++|..+-++. T Consensus 80 ~~~~~~~-----~~~~~~~~-~-n---~~~~~~~~~~~~~~~~G~a~~~~y~de~~~~~~~~~~~~~~~~i~p~~~~~vy 149 (451) T protein:vir:10 80 IDNNKEL-----NEKVTDVL-G-N---EFTRKAKNLAIEASNCGSAWLHYWIDEEYSGEQVTNQTFKYGVVNTEEIIPIY 149 (451) T ss_pred cCCcHHH-----HHHHHHHh-c-c---CHHHHHHHHHHHHhhcCeEEEEEeecCCcccccccccceeEEEEcccceEEEE Confidence 3222110 01111121 1 2 34566677888899999999988776541 12347778888887776 Q ss_pred cCCcceee-eeeEEEeecc--cCc--------eEEEccceEEEeecC---------------CCC---------Cccccc Q lcl|Aclame:pro 145 DDVGLLNS-KTKMWYVVNT--GGQ--------QRVLKPEEILHFKNG---------------ITL---------DGLVGV 189 (429) Q Consensus 145 ~~~~~~~~-~~~~~~~~~~--~g~--------~~~~~~~evih~~~~---------------~~~---------~~~~G~ 189 (429) ++...... ....+|.... ++. ...++++.+.+++.. ++. +...|. T Consensus 150 dd~~~~~~~~~ir~~~~~~~~~~~~~~~~~~~~e~yt~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~vPvv~~~nn~~~~ 229 (451) T protein:vir:10 150 RNGIERELEAVIRYYIQLEDVKGQIQKQAYTYVEFWTDKILDKYKFFGVSCCGSQIEHITVQHRFNSVPFVEFSNNIKKQ 229 (451) T ss_pred cCCCCCceEEEEEEEEeeecccccccceEEEEEEEEeCCeEEEEEecccCccccccccccccCCCCeeeEEEeccCCCCC Confidence 54321111 1111111111 010 112333333333210 000 123467 Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHccCCcceEEEeC-CCCCHHHHHHHHHHHHHHhcccccccceeecC-------CCc Q lcl|Aclame:pro 190 PTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYV-GDLNEDAKKVFRENFESMSSGLQNSHRIALMP-------VGY 261 (429) Q Consensus 190 s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~-~~~~~e~~~~~~~~~~~~~~g~~~~~~~~vl~-------~g~ 261 (429) |-++.....++....+.....+.++..+.|-.+++-- .....+.... +.. .+++.+. +++ T Consensus 230 ~d~e~v~~liDa~~~~~S~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~----~~~--------~~~i~~~~~~~~~~~~~ 297 (451) T protein:vir:10 230 SDLSKYKKILDLYDRVMSGFANDLEDIQQIIYILENFGGEDTSEFLKE----LKR--------YKTIKTETDSEGDSGGL 297 (451) T ss_pred CchhhHHHHHHHHHHHHHHHHHHHHHhccceeeeecCCcccchhhHHH----Hhh--------CCeEEecCcCCccCCcc Confidence 7788877777777766666666666666665554421 1122222221 111 1122222 345 Q ss_pred eeEecCCChhHHHHHHHHHHHHHHHHHHhcCChhhcCCccccccccHH----------HHHHHHHHHHHhHHHHHHHHHH Q lcl|Aclame:pro 262 QFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKATLNNIE----------QQQQQFYTDTLQATLTMYEQEM 331 (429) Q Consensus 262 ~~~~~~~~~~d~~~~e~~~~~~~~Ia~~fgvp~~~l~~~~~~~~~n~~----------~~~~~~~~~~l~P~~~~i~~~l 331 (429) +|.....+ ...+.+..+...+.|...-++|..-....+..++.... ......+..++.-+++.+...+ T Consensus 298 ~~l~~~~~--~~~~~~~~~~l~~~I~~~s~~p~~~~~~~gn~Sg~Alk~~~~~l~~k~~~k~~~f~~~l~~~~~li~~~~ 375 (451) T protein:vir:10 298 KTMQIEIP--TEARKIILEILKKQIYESGQGLQQDTENFGNASGVALKFFYRKLELKSGLLETEFRTSFDKLIKAILYFL 375 (451) T ss_pred eEEeecCC--HHHHHHHHHHHHHHHHHHhCcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh Confidence 66554443 33355678888888888888875322111111111111 1122333444444444444433 Q ss_pred HHhhccchhhcchhhhhhhhhhHhhhhHHHHHHHHHHHHhCCCCCHHHHHHHhCCCCCCC--cceeeecccccccccccc Q lcl|Aclame:pro 332 TYKLFLDSELDKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEAG--GDRLLVNGNMLPIDMAGQ 409 (429) Q Consensus 332 ~~~ll~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~Gl~~~~~--gD~~~~~~n~~~~~~~~~ 409 (429) .. .. ...+.+.| ..-+..|..+.++.+.++ .|+++..-+.++++.-..+. ......-.... .. T Consensus 376 ~~-----~d-~~~i~i~f--~~~~p~n~~e~~~~~~kl--~g~iS~et~~~~~p~v~d~~~e~~~~~ee~~~~-~~---- 440 (451) T protein:vir:10 376 GV-----TD-YKKIQQTY--TRNMMSNDLEDADIATKS--VGIIPTKIILRHHPWVDDVEEAEKLYLEEKKIQ-AS---- 440 (451) T ss_pred CC-----CC-ccceeEEe--cCCCCCCHHHHHHHHHHH--hccCchHHHHHhCCCCCCHHHHHHHHHHHHHHH-HH---- Confidence 21 11 22334445 455778899999999888 48899988888886643221 00000000000 00 Q ss_pred ccCCCCCCCCCCCCCCCC Q lcl|Aclame:pro 410 AYLKGGDTNGEVSKEGNE 427 (429) Q Consensus 410 ~~~~~g~~~~~~~~~~~~ 427 (429) + . .+.-+.-+| T Consensus 441 ---~---~-~~~~~~~~~ 451 (451) T protein:vir:10 441 ---K---V-SDDYNNFTE 451 (451) T ss_pred ---H---H-HhhcCCCCC Confidence 0 0 000000011 No 229 >protein:vir:106999 Length: 564 # NCBI annotation: portal vertex protein gp20 # Family: family:all:1036 # MgeID: mge:1459 # MgeName: S-PM2 # Cross-refs: genbank:acc:YP_195138;genbank:gi:58532915;interpro:IPR010823;uniprot:Q5GQN4;genbank:GeneID:3260496 Probab=92.07 E-value=0.013 Score=30.93 Aligned_cols=419 Identities=15% Similarity=0.161 Sum_probs=172.3 Q ss_pred Cchhhhhhcccccc-----cccccccCCch--HHHH-HhhcCCCCcc----ee-------chhhhhccHHHHHHHHHHHH Q lcl|Aclame:pro 1 MDSVKKFFNFEKRQ-----TSQVIELNKDD--EKLL-EWLGISPSTI----SV-------KGKNALKVATVFACIKILSE 61 (429) Q Consensus 1 Mg~~~~~~~~~~~~-----~~~~~~~~~~~--~~~~-~~~~~~~~~~----~~-------~~~~a~~~~~v~~~i~~ia~ 61 (429) |+ .+|++.-.. ..++++....+ ..+. ++.|...... .- ..+..+.+|.|-.||+.|.+ T Consensus 1 m~---~lfgf~i~~~~~~~~~S~vpp~~~~~~~~i~~g~~g~~v~~~g~~~~~n~~eLI~~YR~ma~~pEVd~Av~eIVn 77 (564) T protein:vir:10 1 MS---QLFGFLINEKEGQKGQSPVPPNDEASVSTVAGGYFGTYVDTSGGQNSRNEYELIRRYRDMSLHPEVDSAIDEIVN 77 (564) T ss_pred Cc---chhcceeeeeccCCCCCcccCCcCCChhhhhccccceeeecccccchhhHHHHHHHHHHHhhccchhhHHHHhhc Confidence 54 456653321 11222222111 1111 1111110000 00 12445678999999999998 Q ss_pred hhccC-----ceEEEecCCceeeee----ecchhhhhhcccCcCCCCHHHHHHHHHHHHHhhCCeEEEEeeCCC---Cce Q lcl|Aclame:pro 62 SVSKL-----PLKIYQEDEYGIQRG----TKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRK---GKV 129 (429) Q Consensus 62 ~ia~~-----~~~~~~~~~~~~~~~----~~~~~~~~l~~~PN~~~s~~~~~~~~~~~~l~~G~~~~~~~~~~~---g~~ 129 (429) .+.-. |+.|.-.+.+ .... ....+.++|+. -+....+ ..+++.|.+.|..|..++.+.. .-. T Consensus 78 eaIv~d~~~~pV~vdL~~~~-~s~siK~kI~eEF~~Il~l-l~F~~~~----~e~fR~WYVDgRi~fHkiid~~~pk~GI 151 (564) T protein:vir:10 78 EFVVNDGDDKPVEVDLQNLE-IGSGVKKKIRDEFNRILRM-MNFNVNA----HEIIRNWYVDGRSHYHKVIDLDNPKKGI 151 (564) T ss_pred ceeEecCCCceEEEEecccC-cchHHHHHHHHHHHHHHHH-hccchhh----hHHHhhhhhcceEEEEEEeeCCChhhhh Confidence 74321 1222111100 0000 11223334431 2223333 3456667788999998766532 127 Q ss_pred EEEEeeCCcceEEEEcCCc------ceeee----------eeEEEeecccC-----------------ceEEEccceEEE Q lcl|Aclame:pro 130 QALWPIDASKVTVYIDDVG------LLNSK----------TKMWYVVNTGG-----------------QQRVLKPEEILH 176 (429) Q Consensus 130 ~~l~~l~p~~v~~~~~~~~------~~~~~----------~~~~~~~~~~g-----------------~~~~~~~~evih 176 (429) .+|..|+|..|+.++.... ..... ...+|.+...+ ....++.+.|.| T Consensus 152 ~eLr~lDPr~i~~vr~i~~~~~~~~~~v~k~~~~~~~y~~~~Eyy~Ynp~~~~g~~~~~~~~~~~~~~~~ikI~~daI~y 231 (564) T protein:vir:10 152 LELRYIDSLKIRKVRQKLKDVDPNRKEIEKGTALQYDYGDFIEYYIYNPKGFAGNIPMVTGSMDWSNQEGIKIASDAIAQ 231 (564) T ss_pred hhhhhhcccceeeeeeeccccccccceeeeeeeeeccccccccceeeccccccCcccccccccccccccceeechhhcce Confidence 8999999998876652111 10000 11234444221 235677888877 Q ss_pred eecCCC-CCcccccCHHHHHHHHHHHHHHHHHHHHHHHHccCCcceEEEeCC-CCCHHHHHHHHHHHHHHhcc----ccc Q lcl|Aclame:pro 177 FKNGIT-LDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVG-DLNEDAKKVFRENFESMSSG----LQN 250 (429) Q Consensus 177 ~~~~~~-~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~-~~~~e~~~~~~~~~~~~~~g----~~~ 250 (429) ...+-- .+...-+|-|..|.+.+....-++...--+--..+.-.-+.-++. .+.+.-+++..+.+...|+. ... T Consensus 232 ~hSGL~d~~~~~i~gyLhkAIKp~NQLkmlEDAlVIYRitRAPeRRvFYIDVGnLPk~KAeqYlr~iM~k~KNklVYDa~ 311 (564) T protein:vir:10 232 STSGLMDLNKKMTLSFLHKAIKSLNQLRMIEDSLVIYRLSRAPERRIFYIDVGNLPKVKAEQYLRDVMSRYRNKLVYDGQ 311 (564) T ss_pred ecccceeCCCCceeccchhhhHhHHhhHHHHhhHHHHhhhccccceEEEEecCCCCchhHHHHHHHHHHhcCceEEEecc Confidence 764422 233445667888877777666555554444334455555555553 34444444444444444431 011 Q ss_pred ccce-------eec----------CCCceeEecCCChhHHHHHHHHHHHHHHHHHHhcCChhhcCCccc-ccc--c-cH- Q lcl|Aclame:pro 251 SHRI-------ALM----------PVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSK-ATL--N-NI- 308 (429) Q Consensus 251 ~~~~-------~vl----------~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~fgvp~~~l~~~~~-~~~--~-n~- 308 (429) .|.+ ..| ..|.+++.|.-.- .+.=++-..+..+.+.++++||.+-|..... .+. + -+ T Consensus 312 TGevrddrk~msMlEDyWLPRReGgrgTEItTLpGgq-nLgem~DV~YF~kKLY~aLnVP~SRl~~e~~~f~~Gr~~EIt 390 (564) T protein:vir:10 312 TGEIRDDKKHMSMLEDFWLPRREGGRGTEITTLPGGQ-NLGELKDVEYFKKKLYNSLNLPPSRLTDDNKAFNLGKSTEIL 390 (564) T ss_pred CceecccchhhhhHhhhcccccCCCcccceeeccccC-CcchHHHHHHHHHHHHHHhCCCcccccCCCceeecccccchh Confidence 1211 112 1367777765331 2222345667789999999999999875421 221 1 11 Q ss_pred --HHHHHHHHHHHHhHHHHHHHHHHHHhhccc-----hhhcc---hhhhhhhhhhH----hhhh-HHHHHHHHHHH--Hh Q lcl|Aclame:pro 309 --EQQQQQFYTDTLQATLTMYEQEMTYKLFLD-----SELDK---GFYSKFNVDAI----LRAD-IKTRYEAYRTG--IQ 371 (429) Q Consensus 309 --~~~~~~~~~~~l~P~~~~i~~~l~~~ll~~-----~~~~~---~~~~~fd~~~l----~~~d-~~~~~~~~~~~--~~ 371 (429) |=....|+..-=.-+...|.+.|.+.|..+ .++.. .+++.|..|.. .... +..|...+..+ +- T Consensus 391 RDEiKF~KFI~RLR~rFs~lF~~~Lk~qLiLKgiit~eeW~~i~~~I~~~f~~Dn~f~ElKe~Eil~~Rl~~l~~~dpyv 470 (564) T protein:vir:10 391 RDELKFTKFIGRLRKRFAQLFHDILKTQLILKGIITPEDWDDMEEHIQYDFLFDNHFNELKEQEMQLQRVNLATQMDPFV 470 (564) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCHHHHHHHhhcceEEeeecchHHHHHHHHHHHHHHHHHHHhhhhh Confidence 111222322222223334444444443322 22211 12222322221 1111 12233322222 00 Q ss_pred CCC------------CCHHHHHHH---------hCC--CCC--CCcceeeecc-ccccccccc------cccCC--CCCC Q lcl|Aclame:pro 372 GGF------------LKPNEARSK---------EDL--PPE--AGGDRLLVNG-NMLPIDMAG------QAYLK--GGDT 417 (429) Q Consensus 372 ~g~------------~t~NE~R~~---------~Gl--~~~--~~gD~~~~~~-n~~~~~~~~------~~~~~--~g~~ 417 (429) +-. +|=+|+-++ .|+ +|. ..||..-++. ...|.+... ++..+ ++.. T Consensus 471 Gky~S~dyi~k~ILr~tDeei~~~~kqI~~E~k~~~~~~P~e~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~a~ 550 (564) T protein:vir:10 471 GKYFSTEYIRRKILMQTENEFKEIDKQMKSDIESGLAIDPIQVNMLDDMEKQNQAFAPELQAAQDDLAAEREIKKLNSAP 550 (564) T ss_pred ccccchHHHHHHHhccCHHHHHHHHHHHHHHhhcCCCCCchhhhcCCCccCCCCcCCcchhhhccccccccChhhhccCC Confidence 111 222333211 122 221 1233222111 112221110 11111 1111 Q ss_pred CCCCCCCC-CCCC Q lcl|Aclame:pro 418 NGEVSKEG-NEGN 429 (429) Q Consensus 418 ~~~~~~~~-~~~n 429 (429) ...+..++ .+.| T Consensus 551 ~~~~~~~~~~~~~ 563 (564) T protein:vir:10 551 KPPPSQQSKSQSN 563 (564) T ss_pred CCCCCCCCcCcCC Confidence 11111111 1112 No 230 >protein:vir:105154 Length: 525 # NCBI annotation: conserved phage-related protein # Family: family:all:6660 # MgeID: mge:1466 # MgeName: C-St # Cross-refs: genbank:acc:YP_398597;genbank:gi:80159853;genbank:GeneID:3772992 Probab=90.63 E-value=0.02 Score=29.92 Aligned_cols=399 Identities=16% Similarity=0.131 Sum_probs=165.2 Q ss_pred CchhhhhhcccccccccccccCCchHHHHHhhcCCCCcce--echhhhhc--cHHHHHHHHHHHHhhccCceEEEecCCc Q lcl|Aclame:pro 1 MDSVKKFFNFEKRQTSQVIELNKDDEKLLEWLGISPSTIS--VKGKNALK--VATVFACIKILSESVSKLPLKIYQEDEY 76 (429) Q Consensus 1 Mg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~a~~--~~~v~~~i~~ia~~ia~~~~~~~~~~~~ 76 (429) =|++..+|+..+-+. ...+.+-.||........ ++.-+++. ...|+.-.++|- ++..+.+++..-+++ T Consensus 47 ~gfv~~~~~ng~i~~-------v~~~~l~~~f~npd~~~~~i~~l~~y~yi~~~~v~ql~~li~-~lp~l~y~i~~~~~~ 118 (525) T protein:vir:10 47 DGFVMDLCNNGKIKT-------VNLDTLQLWFNNPDKYINNIVNLLTYYYIIDGNVFQLYDLIF-SLPPLDYQIKVLKRD 118 (525) T ss_pred HHHHHHhhcCCceee-------eeHHHHHhhhcChHHHHHHHHHHHHHhhhhcchHHHHHHHHH-hcCCcceeehhhhhc Confidence 455555554322111 111222223322111110 00011111 122333333332 223333333222211 Q ss_pred eeeeeecchhhhhhcccCcCCCCHHHHHHHHHHHHHhhCCe--------------------EEEEeeCCCCceEEEEeeC Q lcl|Aclame:pro 77 GIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNS--------------------YANIEFDRKGKVQALWPID 136 (429) Q Consensus 77 ~~~~~~~~~~~~~l~~~PN~~~s~~~~~~~~~~~~l~~G~~--------------------~~~~~~~~~g~~~~l~~l~ 136 (429) ..... | ..+||..-..-.-..++-+.++.++...|.- |+.+-....|..+.. ++ T Consensus 119 k~~~~--~--~s~~n~~l~k~i~hk~ltrdll~q~a~~gtlig~wlg~~~~py~~vf~~~kyvfp~~r~~g~~v~v--id 192 (525) T protein:vir:10 119 KDYKE--D--LSTINLYLEKKIQHKQLTRDLLVQLAHSGTLIGTWLGSKREPYFNVFNNLKYVFPYGRAKGKMVAV--ID 192 (525) T ss_pred cchhh--H--HHHHHHHHHHhHHHHHHHHHHHHHhhccCceeEeeecCCCCcchhhhhhhhhhccccccCCceEEE--Ee Confidence 10000 1 1111110000001111111122222212211 111111111211111 01 Q ss_pred CcceEEEEc----------CCcceeeeeeEEEeecccC----ceEEEccceEEEeecCCCC-CcccccCHHHHHHHHHHH Q lcl|Aclame:pro 137 ASKVTVYID----------DVGLLNSKTKMWYVVNTGG----QQRVLKPEEILHFKNGITL-DGLVGVPTMEYLKSTLEN 201 (429) Q Consensus 137 p~~v~~~~~----------~~~~~~~~~~~~~~~~~~g----~~~~~~~~evih~~~~~~~-~~~~G~s~~~~~~~~i~~ 201 (429) -..++-..+ +..........+..+.... +...+|-+.++|+|-.-+. ++..|.|.+..+...+.. T Consensus 193 ~~~f~~~~~~~r~~~~~~lsp~i~~~~y~~~~~~~~~~~~~~r~i~LP~e~t~~lr~~tl~rnqrlG~s~vtp~l~dI~h 272 (525) T protein:vir:10 193 LQWFDEMSELERKLTFENLSPLITENKYKKWKEYNGENEDALRYIMLPISKTLVARIHTLSRNQRLGIPYGTQTLFDIQH 272 (525) T ss_pred hHHhhhhhHHHHHHHHHhhchhhhhhhhhHHhhcccccchhheeeecccceeEEeeecccccCcccCcchhhhHHHHHHH Confidence 000000000 0000000111111111111 2245788999999966444 445599999999888888 Q ss_pred HHHHHHHHHHHHHccCCcceEEEeCCCC-----CHHHHH-HHHHHHHHHhc-ccccccceee--cCCCceeE--ecCC-- Q lcl|Aclame:pro 202 SASADKFINNFYKQGLQVKGLVQYVGDL-----NEDAKK-VFRENFESMSS-GLQNSHRIAL--MPVGYQFQ--PISL-- 268 (429) Q Consensus 202 ~~~~~~~~~~~~~ng~~~~~~~~~~~~~-----~~e~~~-~~~~~~~~~~~-g~~~~~~~~v--l~~g~~~~--~~~~-- 268 (429) .........++...=..+-.++++.+.- -++..+ ++......+.. |.+...++.+ +|.=.+++ .+.. T Consensus 273 k~klrd~EqsIA~kii~a~avLk~gg~~gn~mk~p~~~kqkil~gVk~aleK~~kdK~Gi~vi~~Pdfa~~efp~ik~~~ 352 (525) T protein:vir:10 273 KQKLRDLEQSIADKIIKAMAVLKFRGKDDNDSKVKESAKRKVLAGVKRALEKGVKDKNGIACIAMPDFATFEFPEIKNGD 352 (525) T ss_pred HHHHHHHHHHHHHHhhhhheeeeeccccCccccCchHHHHHHHHHHHHHHhcccccccCeEEEeccceeecccccccCcc Confidence 8888888888888777787888765432 133222 23333333332 2222223433 45444444 2221 Q ss_pred ChhHHHHHHHHHHHHHHHHHHhcCChhhcCCccccccccHHHHHHHHHHHHHhHHHHHHHHHHHHhh---ccchhhcchh Q lcl|Aclame:pro 269 NMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKATLNNIEQQQQQFYTDTLQATLTMYEQEMTYKL---FLDSELDKGF 345 (429) Q Consensus 269 ~~~d~~~~e~~~~~~~~Ia~~fgvp~~~l~~~~~~~~~n~~~~~~~~~~~~l~P~~~~i~~~l~~~l---l~~~~~~~~~ 345 (429) ..-|-+ --+....+|-.|+|+..+++++ +.+||+++.-....||+. +.=+++.|++..++-+ |+. + .+. T Consensus 353 ~glDg~---K~d~I~~DI~~A~GlS~sL~nG-dggNyAtaslnld~fykk-igVm~e~Iee~y~kL~d~Vl~~-~--k~~ 424 (525) T protein:vir:10 353 KTLDPK---KYDSIDNDITNATGISQVLTNG-TKGNYASAKLNLDVFYKK-IGVMLEIIEEIYNQLIDIILGE-E--KGC 424 (525) T ss_pred cCCCch---hhhhhhhhhhhhhccceeeecC-CCCceeeeeeeHHHHHHH-HHHHHHHHHHHHHHHHhhhcCc-c--cCc Confidence 111111 2345578999999999999876 457888887777778876 6667888886554432 222 2 233 Q ss_pred hhhhhhhhHhhhhHHHHHHHHHHHHhCCCCCHHHHHHHhCCCCCCC------------cc-eeeeccccccccccccccC Q lcl|Aclame:pro 346 YSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEAG------------GD-RLLVNGNMLPIDMAGQAYL 412 (429) Q Consensus 346 ~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~Gl~~~~~------------gD-~~~~~~n~~~~~~~~~~~~ 412 (429) -+-|+.+.-...+.+++....-++...|+. .--+....|..-.|. ++ +.+.|.+...+.. T Consensus 425 nyifnydkd~pi~~kkk~d~LIkL~d~g~s-~k~vldl~gis~e~y~E~s~yEtE~lkl~EKi~pp~~~~v~SG------ 497 (525) T protein:vir:10 425 NYIFQYNKDTPIEREKKLDTLIKLEAQGYS-AKYVLDILGISSEEYFEESIYEIEKLKLREKIMPPLNTNVLSG------ 497 (525) T ss_pred ceEEecCCCchhhhhhhhhhhhhhhccchh-hhhhhhhhccCcchHHHHHHHHHHHHHHhhhccccccceeeec------ Confidence 333444444566778888888888888873 333333444332110 11 1122222111111 Q ss_pred CCCCCCCCCCCCCCCCC Q lcl|Aclame:pro 413 KGGDTNGEVSKEGNEGN 429 (429) Q Consensus 413 ~~g~~~~~~~~~~~~~n 429 (429) +.+. .-.-|+..++++ T Consensus 498 k~~n-~iG~P~~dd~~~ 513 (525) T protein:vir:10 498 KDGN-DIGSPKLDDSDS 513 (525) T ss_pred cccc-cccCCccCCCcc Confidence 0000 111112111111 No 231 >protein:vir:100598 Length: 516 # NCBI annotation: gp20 head portal vertex protein # Family: family:all:1036 # MgeID: mge:1488 # MgeName: 25 # Cross-refs: genbank:acc:YP_656382;genbank:gi:109290133;genbank:GeneID:4156576 Probab=90.57 E-value=0.02 Score=29.88 Aligned_cols=406 Identities=11% Similarity=0.118 Sum_probs=172.4 Q ss_pred Cchhhhhhccccc-----------ccc-cccccCCchHH-----------HHH----hhcCCCCccee------chhhhh Q lcl|Aclame:pro 1 MDSVKKFFNFEKR-----------QTS-QVIELNKDDEK-----------LLE----WLGISPSTISV------KGKNAL 47 (429) Q Consensus 1 Mg~~~~~~~~~~~-----------~~~-~~~~~~~~~~~-----------~~~----~~~~~~~~~~~------~~~~a~ 47 (429) |..++ +|++..+ ++. ++++....+.. ..+ +++.. +.... +.++.. T Consensus 1 ~~~~~-lf~f~~~~d~~~~~~~~~~~~~s~~~p~~~DGa~~i~~~~~~~~~~g~~~~~~d~~-~~~~~~~~LI~~YR~ma 78 (516) T protein:vir:10 1 MKFLD-LFKFWDRVDQNEYDERLKQGHESIATPKKDDGATEIEAREGESSYNALMQQFFGID-NNISGTKDLINTYRQLT 78 (516) T ss_pred CCchH-hcccccchhhHHHHhhhcCCCCcccCCCCccCceeeecCcccccccceeeeeeccc-CccccHHHHHHHHHHhh Confidence 77765 5665322 111 11111111100 001 11111 11111 134456 Q ss_pred ccHHHHHHHHHHHHhhccC-----ceEEEecCCc---eeeeeecchhhhhhcccCcCCCCHHHHHHHHHHHHHhhCCeEE Q lcl|Aclame:pro 48 KVATVFACIKILSESVSKL-----PLKIYQEDEY---GIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYA 119 (429) Q Consensus 48 ~~~~v~~~i~~ia~~ia~~-----~~~~~~~~~~---~~~~~~~~~~~~~l~~~PN~~~s~~~~~~~~~~~~l~~G~~~~ 119 (429) .+|.|-.||+.|.+.+.-+ |+.+--.+-+ +........+.++|+. -+....+ ..+++.|.+.|..|. T Consensus 79 ~~pEvd~Av~eIvneaiv~d~~~~pV~l~l~~~e~s~sik~kI~eeF~~Il~l-l~F~~~~----~~~fR~WYVDgRi~f 153 (516) T protein:vir:10 79 NNPEVERAVANIVNEAVVYEKGHKVVSLDLDDTEFSSSIKDKILEEFDEICRL-LDASRKL----DTLFRRWYIDSRIFF 153 (516) T ss_pred hccchhHHHHHhhcceeEecCCCceEEEEecccccchHHHHHHHHHHHHHHHH-hccchhh----hHHHHhhhhcceEEE Confidence 7899999999999875432 2222111100 0000011123333331 2222333 345666778899998 Q ss_pred EEeeC-CCCceEEEEeeCCcceEEEEcCC-----cc---eeeeeeEEEe-----ecccC------ceEEEccceEEEeec Q lcl|Aclame:pro 120 NIEFD-RKGKVQALWPIDASKVTVYIDDV-----GL---LNSKTKMWYV-----VNTGG------QQRVLKPEEILHFKN 179 (429) Q Consensus 120 ~~~~~-~~g~~~~l~~l~p~~v~~~~~~~-----~~---~~~~~~~~~~-----~~~~g------~~~~~~~~evih~~~ 179 (429) .++.+ +..-..+|..|+|..|+.++.-. +. ........|. +..+| ....++.+-|.+... T Consensus 154 hKiid~~k~GI~elr~lDPr~i~~vR~i~~~~~~~~~v~~~~~e~~~Y~~~~~~~~~~g~~~~~~~~ikI~~daI~y~hS 233 (516) T protein:vir:10 154 HKIMPNPKEGIVELRRLDPRHVEYYREIVTSDVGGTSVVKGYREFFVYTTGNEGYAYNGRLFEPNTRIKIPRSAIVYAHS 233 (516) T ss_pred EEEecCcccceeeeeeeCCcceeeEEeeecccCcchhhhhceeeeeeeecCccceeccccccCCCCceecchhheeeeec Confidence 76554 33448899999999998765421 11 1111111111 01111 223444444444332 Q ss_pred C-CCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHHccCCcceEEEeCC-CCCHHHHHHHHHHHHHHhcc----cccccc Q lcl|Aclame:pro 180 G-ITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVG-DLNEDAKKVFRENFESMSSG----LQNSHR 253 (429) Q Consensus 180 ~-~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~-~~~~e~~~~~~~~~~~~~~g----~~~~~~ 253 (429) + -+.+...-+|-|..|.+.+....-++...--+--..+.-.-+.-++. .+.+.-+++..+.+...|+- ..+.|. T Consensus 234 Gl~d~~~~~i~syLhkAiKp~NQLkm~EDAlVIYRitRAPeRRvFYIDVGnLPk~KAeqYl~~iM~k~KNklvYDa~TGe 313 (516) T protein:vir:10 234 GLQDCSDRGIVGYLHNAVKPANQLKLLEDALVIYRITRAPERRVFYIDVGNMPNRKATEYVNGIMQSLKNRVVYDSNTGT 313 (516) T ss_pred CcccCCCCceeceehhhhHhHHhhHHHHhhHHHHhhhccccceEEEEecCCCCchhHHHHHHHHHHhcCceeEEeCCCCe Confidence 2 11222233577888877777666555554444334455555555553 34333444444444443321 112222 Q ss_pred e-------eec----------CCCceeEecCCChhHHHHHHHHHHHHHHHHHHhcCChhhcCCccccc---cccHHH--- Q lcl|Aclame:pro 254 I-------ALM----------PVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKAT---LNNIEQ--- 310 (429) Q Consensus 254 ~-------~vl----------~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~fgvp~~~l~~~~~~~---~~n~~~--- 310 (429) + ..+ ..|.+++.|.-. +.+.-++-..+..+.+.++++||.+-|...+..+ +.+.+= T Consensus 314 v~ddrk~msMlEDyWLpRReGgrgTEItTLpGg-qnlgem~DV~YF~kkLy~aLnVP~SRl~~e~~~~~~~Gr~~EItRD 392 (516) T protein:vir:10 314 VKNQKRNLSMTEDYWLMRRDGKSVTEVTSLPGA-QTMGEMDDVRWFNKKLYEALRIPLSRMPRDDGGMVIGGQDMAITRD 392 (516) T ss_pred eccchhhhhhHhhhcccccCCCcccceeecccc-CCcChHHHHHHHHHHHHHHhCCCcccccCCCCceeeccccchhhHH Confidence 1 112 136777776432 2222335566778999999999999997544322 122211 Q ss_pred --HHHHHHHHHHhHHHHHHHHHHHHhhccc-----hhhcc---hhhhhhhhhh----Hhhh-hHHHHHHHHHHHH--hCC Q lcl|Aclame:pro 311 --QQQQFYTDTLQATLTMYEQEMTYKLFLD-----SELDK---GFYSKFNVDA----ILRA-DIKTRYEAYRTGI--QGG 373 (429) Q Consensus 311 --~~~~~~~~~l~P~~~~i~~~l~~~ll~~-----~~~~~---~~~~~fd~~~----l~~~-d~~~~~~~~~~~~--~~g 373 (429) ....|+..-=.-+...|.+.|.+.|..+ .++.. .+++.|..|. +... -+..|...+..+- -+. T Consensus 393 EiKF~KFI~rLR~rFs~lF~~~L~~qLilKgIit~eeW~~i~~~I~~~f~~Dn~f~ElKe~Eil~~Rl~~l~~~dpyvGk 472 (516) T protein:vir:10 393 ELDFRKFIVQLQHNFEEIFLDPLKTNLIYKKIILESEWEEQINNIKVNFHQDSYYTELKDIETLRQRVDALSQIEPYVGK 472 (516) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCHHHHHHHhhcceEEeeecchHHHHHHHHHHHHHHHHHHHhhhhhcc Confidence 1122332222223345555555544332 22221 1222332222 1111 1233444443332 245 Q ss_pred CCCHHHHHH-HhCCCCCC--CcceeeeccccccccccccccCCCCCCCCCC Q lcl|Aclame:pro 374 FLKPNEARS-KEDLPPEA--GGDRLLVNGNMLPIDMAGQAYLKGGDTNGEV 421 (429) Q Consensus 374 ~~t~NE~R~-~~Gl~~~~--~gD~~~~~~n~~~~~~~~~~~~~~g~~~~~~ 421 (429) +++.+=||+ .|.+...+ ..++....-- .++--+..++..+- T Consensus 473 y~s~~yi~k~ILr~tDeei~~~~k~I~~E~-------~~~~~~~p~~e~~f 516 (516) T protein:vir:10 473 YVSHDYVMKNILQMTDEQIAQEEKQIEKEA-------NVKRFQNPENEDDF 516 (516) T ss_pred ccchHHHHHHHhcCCHhHHHHHHHHHHHhh-------hCCCCCCCCccccC Confidence 677777765 45665321 1111100000 00000000000111 No 232 >protein:vir:95149 Length: 501 # NCBI annotation: hypothetical protein ORF007 # Family: family:all:584 # MgeID: mge:1552 # MgeName: PA73 # Cross-refs: genbank:acc:YP_001293414;genbank:gi:148912835;genbank:GeneID:5228224 Probab=90.36 E-value=0.021 Score=29.75 Aligned_cols=389 Identities=13% Similarity=0.053 Sum_probs=155.8 Q ss_pred CchhhhhhcccccccccccccCCchHHHHHhhcCCC-------Ccce------ec------hhhhhc----cHHHHHHHH Q lcl|Aclame:pro 1 MDSVKKFFNFEKRQTSQVIELNKDDEKLLEWLGISP-------STIS------VK------GKNALK----VATVFACIK 57 (429) Q Consensus 1 Mg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~------~~------~~~a~~----~~~v~~~i~ 57 (429) |.-++. ...........+..+-+.++++. .+.+ .. .+..++ .+++.+.++ T Consensus 1 m~~V~~-------~hp~y~~~~~~W~~ird~~~G~~~~r~~g~~YLP~~~~e~~~~e~~~~Y~~rl~rA~~~n~~~~t~~ 73 (501) T protein:vir:95 1 MPNVSF-------IRPELGKLLPLYYLIRDAIAGEPTVKGARTTYLPMPNAEDQSKENKARYEAYLKRAVFYNVARRTLF 73 (501) T ss_pred CCCCCC-------CCHHHHHHHHHHHHHHHHhcChHHHHhcccccCcCCCCCCCcccchHHHHHHhhccccCchHHHHHH Confidence 442210 00000001111122222222221 1111 00 112222 234444444 Q ss_pred HHHHhhccCceEEEecCCceeeeeecchhhhhhcccCcCCCCHHHHHHHHHHHHHhhCCeEEEEeeCCCCc----e---- Q lcl|Aclame:pro 58 ILSESVSKLPLKIYQEDEYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGK----V---- 129 (429) Q Consensus 58 ~ia~~ia~~~~~~~~~~~~~~~~~~~~~~~~~l~~~PN~~~s~~~~~~~~~~~~l~~G~~~~~~~~~~~g~----~---- 129 (429) .+...+-+-+..+ .....+..++...--...+-.+|.+.++...+.+|-+++++.....+. . T Consensus 74 ~l~G~vf~k~p~~----------~~p~~l~~l~~d~D~~G~~L~~f~~~~~~~~l~~G~~~ilVD~P~~~~~~~~t~a~~ 143 (501) T protein:vir:95 74 GLVGQVFMRDPVV----------KVPALLNPLVANATGSGINLTQLAKRAVSLNLAYSRAGLLVDYPTTEAEGGASIADL 143 (501) T ss_pred HHhhhhhcCCcce----------eCcHHHHHHHhccCCCCCCHHHHHHHHHHHHHhcCeEEEEEeecCCCCcccccHHHH Confidence 4444443333222 112345555544455666889999999999999999999997643211 0 Q ss_pred ------EEEEeeCCcceE----------------------EEEcCCcceeeeeeEEEeec--ccCce--E---------- Q lcl|Aclame:pro 130 ------QALWPIDASKVT----------------------VYIDDVGLLNSKTKMWYVVN--TGGQQ--R---------- 167 (429) Q Consensus 130 ------~~l~~l~p~~v~----------------------~~~~~~~~~~~~~~~~~~~~--~~g~~--~---------- 167 (429) .-+..+.|..|- ...++.+-.... ..+.... .+|.. + T Consensus 144 ~~~~~rPy~~~~~~~~IinW~~~~v~g~~~l~~v~l~E~~~~~d~~f~~~~~-~q~RvL~~~~~g~~~~~v~r~~~~~~~ 222 (501) T protein:vir:95 144 EAGRIRPTLYVYSPTEIINWRTTDRGAEEVLSLVVLFETWCAADDGFEMKTS-GQFRVLRLDEEGYYVHEIWREPQPTKA 222 (501) T ss_pred HhccCCcEEEEecHhhhcCcceeccCCceeeeEEEEEEEEeecCCCccccee-EEEEEEeeCCCceEEEEEEEecCCccc Confidence 123333332220 011110000000 0000000 00000 0 Q ss_pred ------------------------EEccceEEEeecCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHHccCCcceEE Q lcl|Aclame:pro 168 ------------------------VLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLV 223 (429) Q Consensus 168 ------------------------~~~~~evih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~ 223 (429) .+..=-++++ .....+...+.+|+..++...-.......-....+...+.|..++ T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~g~~~l~~IPfv~~-~~~~~~~~~~~pPLl~lA~lni~hy~~ssd~~~~l~~~~~P~l~i 301 (501) T protein:vir:95 223 DGSKIPKGNYQQYVVYKPTDAQGKRLTEIPFMFI-GSENNDSNPDNPNFYDLASLNMAHYRNSADYEESCYIVGQPTPVL 301 (501) T ss_pred CcceecCCcccccceeeeeccCCCcCCeeeEEEE-ecCCCCCCCCccchHHHHHHHHHHHhhhhHHHHHHHHcccceeee Confidence 0000001222 122233445677877665443333333333444556667787776 Q ss_pred EeCCCCCHHHHHHHHHHHHHHhcccccccceeecCCCceeEecCCChhHHHHHHHHHHHHHHHHHHhcCChhhcCCcccc Q lcl|Aclame:pro 224 QYVGDLNEDAKKVFRENFESMSSGLQNSHRIALMPVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKA 303 (429) Q Consensus 224 ~~~~~~~~e~~~~~~~~~~~~~~g~~~~~~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~fgvp~~~l~~~~~~ 303 (429) +- .+++..+..... ...-|+ ...+.++.|.++.-+..++.-+. .+.++....++.. .| ..++...... T Consensus 302 ~G---~~~~~~~~~~~~--~i~~G~---~~~~~lP~~~~~~~ie~~~~~i~-~~~l~~l~~~m~~-~G--a~ll~~~~~~ 369 (501) T protein:vir:95 302 IG---LTEEWVTNVLKG--SVNFGS---RGGIPLPVGADAKLLQASENTML-KEAMDTKERQMVA-LG--AKLVEQKEVQ 369 (501) T ss_pred eC---CcccccccCCCC--ceeecc---cccccCCCCCceeEEecChhhHH-HHHHHHHHHHHHH-HH--HhhccCCccc Confidence 52 222211111100 111232 33567776655544444444443 3444444444433 24 2333222111 Q ss_pred ccccHHHHHHHHHHHHHhHHHHHHHHHHHHhhccchhh----cchhhhhhhhhhHhhhhHHHHHHHHHHHHhCCCCCHHH Q lcl|Aclame:pro 304 TLNNIEQQQQQFYTDTLQATLTMYEQEMTYKLFLDSEL----DKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNE 379 (429) Q Consensus 304 ~~~n~~~~~~~~~~~~l~P~~~~i~~~l~~~ll~~~~~----~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~NE 379 (429) ..+........--.+.|.-++..++++|++.|-.-..+ ..+..|+.+.+-.........++++.+++.+|.++... T Consensus 370 ~Ta~~~~~~~~~~~S~L~~~a~~le~al~~~l~~~a~w~g~~~~~~~v~i~~df~~~~~~~~~~~al~~~~~~G~is~~t 449 (501) T protein:vir:95 370 RTATEAELEAASEGSTLSSATKNVSAAFEWALKWAARWVGQADSGVKFELNTDFDIARMTPDERRSLVEEWQKGAITFEE 449 (501) T ss_pred hhHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCceEEEEecccccccCCHHHHHHHHHHHhCCCCcHHH Confidence 22233333344446667778888888887754211111 12233444443223233344466677889999999999 Q ss_pred HHHHh---CCCCCCC-------cceeeec-cccccccccccccCCCCCCCCCCC Q lcl|Aclame:pro 380 ARSKE---DLPPEAG-------GDRLLVN-GNMLPIDMAGQAYLKGGDTNGEVS 422 (429) Q Consensus 380 ~R~~~---Gl~~~~~-------gD~~~~~-~n~~~~~~~~~~~~~~g~~~~~~~ 422 (429) .++.+ |+.+.+. .|+.--. .+..|.+ +..+..||++=+..+ T Consensus 450 ~~~~L~~~~v~~~~~~~e~e~i~~~~~~~~~~~~~~~--~~~~~~gg~~~~~~~ 501 (501) T protein:vir:95 450 MRTGLRKAGVATEDDSKAKEKIAKDTAEAMALATPAN--VPGDGSGGDNVGNSE 501 (501) T ss_pred HHHHHHhCCCCChhHHHHHHHHHhhhcCcccccccCC--CCCCCcccccccCCC Confidence 98765 4332210 0100000 0001111 001111222211111 No 233 >protein:vir:101806 Length: 516 # NCBI annotation: gp20 # Family: family:all:1036 # MgeID: mge:1580 # MgeName: 31 # Cross-refs: genbank:acc:YP_238883;genbank:gi:66391958;genbank:GeneID:3416633 Probab=89.70 E-value=0.025 Score=29.38 Aligned_cols=407 Identities=9% Similarity=0.105 Sum_probs=173.7 Q ss_pred Cchhhhhhcccccc-----------cc-cccccCCchHH--H---------HHh----hcCCCCcce-----echhhhhc Q lcl|Aclame:pro 1 MDSVKKFFNFEKRQ-----------TS-QVIELNKDDEK--L---------LEW----LGISPSTIS-----VKGKNALK 48 (429) Q Consensus 1 Mg~~~~~~~~~~~~-----------~~-~~~~~~~~~~~--~---------~~~----~~~~~~~~~-----~~~~~a~~ 48 (429) |..++ +|++..+. +. ++++....+.. + .+. ++......+ -..+..+. T Consensus 1 ~~~~~-lf~f~~~~d~~~~~~~~~~~~~s~~~p~~~dGa~~i~~~~~~~~~~g~~~~~~~~~~~~~~~~eLI~~YR~ma~ 79 (516) T protein:vir:10 1 MKFLD-LFKFWDRVDQNEYDERLKLGHESIATPKKDDGATEIETREGEATYNAVMQQFFGIDNNISGTKDLINTYRQLIN 79 (516) T ss_pred CCchH-hcccccchhhhHHhhhhcCCcCcccCCCCCCCceeeecCCCcccccceeeeeeccccccchHHHHHHHHHHHhh Confidence 77765 56653321 11 11111111100 1 111 110000000 01244567 Q ss_pred cHHHHHHHHHHHHhhccC-----ceEEEecCCc---eeeeeecchhhhhhcccCcCCCCHHHHHHHHHHHHHhhCCeEEE Q lcl|Aclame:pro 49 VATVFACIKILSESVSKL-----PLKIYQEDEY---GIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYAN 120 (429) Q Consensus 49 ~~~v~~~i~~ia~~ia~~-----~~~~~~~~~~---~~~~~~~~~~~~~l~~~PN~~~s~~~~~~~~~~~~l~~G~~~~~ 120 (429) +|.|-.||+.|.+.+.-+ |+.+.-.+-+ +........+.++|+. -+....+ ..+++.|.+.|..|.. T Consensus 80 ~pEvd~Av~eIVneaiv~d~~~~pV~l~L~~~~~s~~ik~kI~eeF~~Il~l-l~F~~~~----~~~fR~WYVDgRi~fh 154 (516) T protein:vir:10 80 NPEVERAVANIVNEAIVYERGHKVVSLDLDDTDFGSNVKEKILEEFDEVCRL-LDASRKL----DTLFRRWYVDSRIFFH 154 (516) T ss_pred ccchhhHHHHhhcceeEecCCCceEEEEecccCcchHHHHHHHHHHHHHHHH-hccchhh----hHHHhhhhhcceEEEE Confidence 899999999999875422 2222211110 0000111223334432 2223333 3456667788999988 Q ss_pred EeeC-CCCceEEEEeeCCcceEEEEcCC-----cce---eeeeeEEEe-----eccc------CceEEEccceEEEeecC Q lcl|Aclame:pro 121 IEFD-RKGKVQALWPIDASKVTVYIDDV-----GLL---NSKTKMWYV-----VNTG------GQQRVLKPEEILHFKNG 180 (429) Q Consensus 121 ~~~~-~~g~~~~l~~l~p~~v~~~~~~~-----~~~---~~~~~~~~~-----~~~~------g~~~~~~~~evih~~~~ 180 (429) ++.+ +..-..+|..|+|..|+.++.-. +.. .+....+|. +..+ +....++.+-|.|...+ T Consensus 155 Kiid~~k~GI~Elr~lDPr~i~~vR~i~~~~~~~~~v~~~~~e~~~Y~~~~~~~~~~g~~~~~~~~ikI~~dAI~y~hSG 234 (516) T protein:vir:10 155 KIMPNPKKGIAELRRLDPRFMEYYREIVTSDIGGTTIVKGYREFFIYTTGNEGYSYNGRIFEPNTRIKIPRSAVVYASSG 234 (516) T ss_pred EEecCccccceeeeeeCCcceeeEeeecccccccchhhhhhhheeeeccCccccccccceeCCCcceeechhheeeeccc Confidence 6554 33448899999999998765421 100 000111111 0111 13345566665555432 Q ss_pred C-CCCcccccCHHHHHHHHHHHHHHHHHHHHHHHHccCCcceEEEeCC-CCCHHHHHHHHHHHHHHhcc----cccccce Q lcl|Aclame:pro 181 I-TLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVG-DLNEDAKKVFRENFESMSSG----LQNSHRI 254 (429) Q Consensus 181 ~-~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~-~~~~e~~~~~~~~~~~~~~g----~~~~~~~ 254 (429) - ..+...-+|-|..|.+.+....-++...--+--..+.-.-+.-++. .+.+.-+++..+.+...|+- ..+.|.+ T Consensus 235 L~d~~~~~i~syLhkAiKp~NQLkm~EDAlVIYRitRAPeRRvFYIDvGnlPk~KAeqYl~~im~k~kNklvYDa~TGev 314 (516) T protein:vir:10 235 LMDCSDRGIIGYLHNAVKPANQLKLLEDAMVIYRITRAPERRVFYIDVGNMNNRKATEYVNGIMQSLKNRVVYDSNTGTV 314 (516) T ss_pred ceeCCCCceeeeehhhhHhHHhhHHHHhhHHHHhhhccccceEEEEecCCCCchhHHHHHHHHHHhcCceeEEeCCCCee Confidence 2 1123333677888888777666555554444444455555555553 34444444444444443321 1122221 Q ss_pred -------eec----------CCCceeEecCCChhHHHHHHHHHHHHHHHHHHhcCChhhcCCcccccc--ccHHHHH--- Q lcl|Aclame:pro 255 -------ALM----------PVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKATL--NNIEQQQ--- 312 (429) Q Consensus 255 -------~vl----------~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~fgvp~~~l~~~~~~~~--~n~~~~~--- 312 (429) ..+ ..|.+++.|.-. +.+.-++-..+..+.+.++++||.+-|...+..+. ....+-. T Consensus 315 ~ddrk~msMlEDyWLpRReGgrgTEItTLpGg-qnlgem~DV~YF~kkLy~aLnVP~sRl~~e~~~~~~~Gr~~EItRDE 393 (516) T protein:vir:10 315 KNQKRNLSMTEDYWLMRRDGKSVTEVSSLPGA-QTMGDMDDVRWFNKKLYEALRIPLSRIPRDDGGMVIGGQDTAITRDE 393 (516) T ss_pred ccchhhhhhHhhhcccccCCCCccceeecccc-CCcChHHHHHHHHHHHHHHhCCCcccccCCCCceeeccccchhhHHH Confidence 112 136777776432 22223355667789999999999999975443221 1111111 Q ss_pred ---HHHHHHHHhHHHHHHHHHHHHhhccc-----hhhcc---hhhhhhhhhhH----hhh-hHHHHHHHHHHHH--hCCC Q lcl|Aclame:pro 313 ---QQFYTDTLQATLTMYEQEMTYKLFLD-----SELDK---GFYSKFNVDAI----LRA-DIKTRYEAYRTGI--QGGF 374 (429) Q Consensus 313 ---~~~~~~~l~P~~~~i~~~l~~~ll~~-----~~~~~---~~~~~fd~~~l----~~~-d~~~~~~~~~~~~--~~g~ 374 (429) ..|+..-=.-+...|.+.|.+.|..+ .++.. .+++.|..|.. ... -+..|...+..+- -+.+ T Consensus 394 iKF~KFI~rLR~rFs~lf~~~L~~qLilKgiit~eew~~i~~~I~~~f~~Dn~f~ElKe~Eil~~R~~~l~~~dpyvGky 473 (516) T protein:vir:10 394 LDFRKFVVQLQHDFEEIFLDPLKTNLIYKRIITEDEWDEQINNIKVNFHQDSYYTELKDIETLRLRVDALSQIEPYVGKY 473 (516) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCHHHHHHHhhcceEEeeecchHHHHHHHHHHHHHHHHHHHhhhhhccc Confidence 22222222223334444444443322 22211 12233322221 111 1233444443332 2456 Q ss_pred CCHHHHHH-HhCCCCCC--CcceeeeccccccccccccccCCCCCCCCCC Q lcl|Aclame:pro 375 LKPNEARS-KEDLPPEA--GGDRLLVNGNMLPIDMAGQAYLKGGDTNGEV 421 (429) Q Consensus 375 ~t~NE~R~-~~Gl~~~~--~gD~~~~~~n~~~~~~~~~~~~~~g~~~~~~ 421 (429) ++.+=+|+ .|.+...+ ..++....-- .++--+..++..+- T Consensus 474 ~s~~yi~k~ILr~tDeei~~e~k~I~~E~-------~~~~~~~p~~~~~f 516 (516) T protein:vir:10 474 VSHDYVMKNILQMTEEQIAQEEKQIEQEA-------GIKRFQNPENEDDF 516 (516) T ss_pred cchHHHHHHHhcCCHhhHHHHHHHHHHhh-------hCCCCCCCCccccC Confidence 77777765 45665321 1111100000 00000000000111 No 234 >protein:vir:101189 Length: 516 # NCBI annotation: portal vertex protein of head # Family: family:all:1036 # MgeID: mge:1582 # MgeName: 44RR2.8t # Cross-refs: genbank:acc:NP_932511;genbank:gi:37651637;genbank:GeneID:2610682 Probab=89.70 E-value=0.025 Score=29.38 Aligned_cols=407 Identities=9% Similarity=0.105 Sum_probs=173.7 Q ss_pred Cchhhhhhcccccc-----------cc-cccccCCchHH--H---------HHh----hcCCCCcce-----echhhhhc Q lcl|Aclame:pro 1 MDSVKKFFNFEKRQ-----------TS-QVIELNKDDEK--L---------LEW----LGISPSTIS-----VKGKNALK 48 (429) Q Consensus 1 Mg~~~~~~~~~~~~-----------~~-~~~~~~~~~~~--~---------~~~----~~~~~~~~~-----~~~~~a~~ 48 (429) |..++ +|++..+. +. ++++....+.. + .+. ++......+ -..+..+. T Consensus 1 ~~~~~-lf~f~~~~d~~~~~~~~~~~~~s~~~p~~~dGa~~i~~~~~~~~~~g~~~~~~~~~~~~~~~~eLI~~YR~ma~ 79 (516) T protein:vir:10 1 MKFLD-LFKFWDRVDQNEYDERLKLGHESIATPKKDDGATEIETREGEATYNAVMQQFFGIDNNISGTKDLINTYRQLIN 79 (516) T ss_pred CCchH-hcccccchhhhHHhhhhcCCcCcccCCCCCCCceeeecCCCcccccceeeeeeccccccchHHHHHHHHHHHhh Confidence 77765 56653321 11 11111111100 1 111 110000000 01244567 Q ss_pred cHHHHHHHHHHHHhhccC-----ceEEEecCCc---eeeeeecchhhhhhcccCcCCCCHHHHHHHHHHHHHhhCCeEEE Q lcl|Aclame:pro 49 VATVFACIKILSESVSKL-----PLKIYQEDEY---GIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYAN 120 (429) Q Consensus 49 ~~~v~~~i~~ia~~ia~~-----~~~~~~~~~~---~~~~~~~~~~~~~l~~~PN~~~s~~~~~~~~~~~~l~~G~~~~~ 120 (429) +|.|-.||+.|.+.+.-+ |+.+.-.+-+ +........+.++|+. -+....+ ..+++.|.+.|..|.. T Consensus 80 ~pEvd~Av~eIVneaiv~d~~~~pV~l~L~~~~~s~~ik~kI~eeF~~Il~l-l~F~~~~----~~~fR~WYVDgRi~fh 154 (516) T protein:vir:10 80 NPEVERAVANIVNEAIVYERGHKVVSLDLDDTDFGSNVKEKILEEFDEVCRL-LDASRKL----DTLFRRWYVDSRIFFH 154 (516) T ss_pred ccchhhHHHHhhcceeEecCCCceEEEEecccCcchHHHHHHHHHHHHHHHH-hccchhh----hHHHhhhhhcceEEEE Confidence 899999999999875422 2222211110 0000111223334432 2223333 3456667788999988 Q ss_pred EeeC-CCCceEEEEeeCCcceEEEEcCC-----cce---eeeeeEEEe-----eccc------CceEEEccceEEEeecC Q lcl|Aclame:pro 121 IEFD-RKGKVQALWPIDASKVTVYIDDV-----GLL---NSKTKMWYV-----VNTG------GQQRVLKPEEILHFKNG 180 (429) Q Consensus 121 ~~~~-~~g~~~~l~~l~p~~v~~~~~~~-----~~~---~~~~~~~~~-----~~~~------g~~~~~~~~evih~~~~ 180 (429) ++.+ +..-..+|..|+|..|+.++.-. +.. .+....+|. +..+ +....++.+-|.|...+ T Consensus 155 Kiid~~k~GI~Elr~lDPr~i~~vR~i~~~~~~~~~v~~~~~e~~~Y~~~~~~~~~~g~~~~~~~~ikI~~dAI~y~hSG 234 (516) T protein:vir:10 155 KIMPNPKKGIAELRRLDPRFMEYYREIVTSDIGGTTIVKGYREFFIYTTGNEGYSYNGRIFEPNTRIKIPRSAVVYASSG 234 (516) T ss_pred EEecCccccceeeeeeCCcceeeEeeecccccccchhhhhhhheeeeccCccccccccceeCCCcceeechhheeeeccc Confidence 6554 33448899999999998765421 100 000111111 0111 13345566665555432 Q ss_pred C-CCCcccccCHHHHHHHHHHHHHHHHHHHHHHHHccCCcceEEEeCC-CCCHHHHHHHHHHHHHHhcc----cccccce Q lcl|Aclame:pro 181 I-TLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVG-DLNEDAKKVFRENFESMSSG----LQNSHRI 254 (429) Q Consensus 181 ~-~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~-~~~~e~~~~~~~~~~~~~~g----~~~~~~~ 254 (429) - ..+...-+|-|..|.+.+....-++...--+--..+.-.-+.-++. .+.+.-+++..+.+...|+- ..+.|.+ T Consensus 235 L~d~~~~~i~syLhkAiKp~NQLkm~EDAlVIYRitRAPeRRvFYIDvGnlPk~KAeqYl~~im~k~kNklvYDa~TGev 314 (516) T protein:vir:10 235 LMDCSDRGIIGYLHNAVKPANQLKLLEDAMVIYRITRAPERRVFYIDVGNMNNRKATEYVNGIMQSLKNRVVYDSNTGTV 314 (516) T ss_pred ceeCCCCceeeeehhhhHhHHhhHHHHhhHHHHhhhccccceEEEEecCCCCchhHHHHHHHHHHhcCceeEEeCCCCee Confidence 2 1123333677888888777666555554444444455555555553 34444444444444443321 1122221 Q ss_pred -------eec----------CCCceeEecCCChhHHHHHHHHHHHHHHHHHHhcCChhhcCCcccccc--ccHHHHH--- Q lcl|Aclame:pro 255 -------ALM----------PVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKATL--NNIEQQQ--- 312 (429) Q Consensus 255 -------~vl----------~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~fgvp~~~l~~~~~~~~--~n~~~~~--- 312 (429) ..+ ..|.+++.|.-. +.+.-++-..+..+.+.++++||.+-|...+..+. ....+-. T Consensus 315 ~ddrk~msMlEDyWLpRReGgrgTEItTLpGg-qnlgem~DV~YF~kkLy~aLnVP~sRl~~e~~~~~~~Gr~~EItRDE 393 (516) T protein:vir:10 315 KNQKRNLSMTEDYWLMRRDGKSVTEVSSLPGA-QTMGDMDDVRWFNKKLYEALRIPLSRIPRDDGGMVIGGQDTAITRDE 393 (516) T ss_pred ccchhhhhhHhhhcccccCCCCccceeecccc-CCcChHHHHHHHHHHHHHHhCCCcccccCCCCceeeccccchhhHHH Confidence 112 136777776432 22223355667789999999999999975443221 1111111 Q ss_pred ---HHHHHHHHhHHHHHHHHHHHHhhccc-----hhhcc---hhhhhhhhhhH----hhh-hHHHHHHHHHHHH--hCCC Q lcl|Aclame:pro 313 ---QQFYTDTLQATLTMYEQEMTYKLFLD-----SELDK---GFYSKFNVDAI----LRA-DIKTRYEAYRTGI--QGGF 374 (429) Q Consensus 313 ---~~~~~~~l~P~~~~i~~~l~~~ll~~-----~~~~~---~~~~~fd~~~l----~~~-d~~~~~~~~~~~~--~~g~ 374 (429) ..|+..-=.-+...|.+.|.+.|..+ .++.. .+++.|..|.. ... -+..|...+..+- -+.+ T Consensus 394 iKF~KFI~rLR~rFs~lf~~~L~~qLilKgiit~eew~~i~~~I~~~f~~Dn~f~ElKe~Eil~~R~~~l~~~dpyvGky 473 (516) T protein:vir:10 394 LDFRKFVVQLQHDFEEIFLDPLKTNLIYKRIITEDEWDEQINNIKVNFHQDSYYTELKDIETLRLRVDALSQIEPYVGKY 473 (516) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCHHHHHHHhhcceEEeeecchHHHHHHHHHHHHHHHHHHHhhhhhccc Confidence 22222222223334444444443322 22211 12233322221 111 1233444443332 2456 Q ss_pred CCHHHHHH-HhCCCCCC--CcceeeeccccccccccccccCCCCCCCCCC Q lcl|Aclame:pro 375 LKPNEARS-KEDLPPEA--GGDRLLVNGNMLPIDMAGQAYLKGGDTNGEV 421 (429) Q Consensus 375 ~t~NE~R~-~~Gl~~~~--~gD~~~~~~n~~~~~~~~~~~~~~g~~~~~~ 421 (429) ++.+=+|+ .|.+...+ ..++....-- .++--+..++..+- T Consensus 474 ~s~~yi~k~ILr~tDeei~~e~k~I~~E~-------~~~~~~~p~~~~~f 516 (516) T protein:vir:10 474 VSHDYVMKNILQMTEEQIAQEEKQIEQEA-------GIKRFQNPENEDDF 516 (516) T ss_pred cchHHHHHHHhcCCHhhHHHHHHHHHHhh-------hCCCCCCCCccccC Confidence 77777765 45665321 1111100000 00000000000111 No 235 >protein:vir:108049 Length: 524 # NCBI annotation: gp20 portal vertex protein of head # Family: family:all:1036 # MgeID: mge:2002 # MgeName: JS98 # Cross-refs: genbank:acc:YP_001595296;genbank:gi:161622602;genbank:GeneID:5783768 Probab=89.22 E-value=0.028 Score=29.13 Aligned_cols=408 Identities=9% Similarity=0.076 Sum_probs=172.3 Q ss_pred Cchhhhh---hcccccc-----------cc-cccccCCchHH--------------HH-HhhcCCCCcce------echh Q lcl|Aclame:pro 1 MDSVKKF---FNFEKRQ-----------TS-QVIELNKDDEK--------------LL-EWLGISPSTIS------VKGK 44 (429) Q Consensus 1 Mg~~~~~---~~~~~~~-----------~~-~~~~~~~~~~~--------------~~-~~~~~~~~~~~------~~~~ 44 (429) |.-|+++ |++..+. +. +++.....+.. +. ++++....... -..+ T Consensus 1 ~~~~~~~~~lf~f~~~~de~~~~~~~~~~~~S~~~p~~~dGa~~I~~~~~~~~~~~~~q~~y~~~e~~~~~~~eLI~~YR 80 (524) T protein:vir:10 1 MANFNTILSFLKPWANEDEKEYKQQINNNLESVTAPKLDDGAREIETQEQNIPYNALMQQMFGSNEPEVKNTRELIDTYR 80 (524) T ss_pred CCchhhHHHHhhhhhcchhhhhhhhhccCCCccccCCCCCCceeeccCcccccchhhhhhhhhcccchhhhHHHHHHHHH Confidence 6665543 3433220 11 11111111000 00 01110000000 0124 Q ss_pred hhhccHHHHHHHHHHHHhhccC-----ceEEEecCCc---eeeeeecchhhhhhcccCcCCCCHHHHHHHHHHHHHhhCC Q lcl|Aclame:pro 45 NALKVATVFACIKILSESVSKL-----PLKIYQEDEY---GIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGN 116 (429) Q Consensus 45 ~a~~~~~v~~~i~~ia~~ia~~-----~~~~~~~~~~---~~~~~~~~~~~~~l~~~PN~~~s~~~~~~~~~~~~l~~G~ 116 (429) ..+.+|.|-.||+.|.+.+.-. |+.+.-.+-+ +........+.++|+. -+....+ ..+++.|.+.|. T Consensus 81 ~ma~~pEvd~Av~eIVneaiv~d~~~~pV~l~Ld~~~~s~siK~kI~eeF~~Il~l-l~F~~~~----~~~fR~WYVDgR 155 (524) T protein:vir:10 81 NLMNNYEVDNAVQEIVSDAIVYEDDKEVVALNLDGTDFSQSIKDKILAEFSEVLNL-LNFQRKG----TDHFQRWYVDSR 155 (524) T ss_pred HHhhccchhhHHHHhhcceeEecCCCceEEEEecccCcchHHHHHHHHHHHHHHHH-hccchhh----hHHHhhheeece Confidence 4567899999999999875422 2222211110 0000111223334431 2222333 345667788899 Q ss_pred eEEEEeeCCC---CceEEEEeeCCcceEEEEcC-----Ccceee-eeeEEEeec-------------ccCceEEEccceE Q lcl|Aclame:pro 117 SYANIEFDRK---GKVQALWPIDASKVTVYIDD-----VGLLNS-KTKMWYVVN-------------TGGQQRVLKPEEI 174 (429) Q Consensus 117 ~~~~~~~~~~---g~~~~l~~l~p~~v~~~~~~-----~~~~~~-~~~~~~~~~-------------~~g~~~~~~~~ev 174 (429) .|..++.+.. .-..+|..|+|..|+.++.- .+.... ....++.+. ..+....++.+.| T Consensus 156 i~fHkiid~~~pk~GI~Elr~lDPr~i~~vr~i~~~~~~~~~vi~~~~e~f~Y~~~~~~~~~~~~~~~~~~~ikI~~dAI 235 (524) T protein:vir:10 156 IFFHKIINPKKMKDGVQELRRLDPRQVQYIREIVTRMEDGVKIVDGYREFFVYDTGHESYCADGRIYSAGTKVKIPRAAV 235 (524) T ss_pred EEEEEEeeCCCccccceeeeeeCCccceeeeeecccCcccchhhcchhhheeecCCCcccccCcceecCCcceecchhhe Confidence 9998866532 24789999999999764321 111100 111122211 2334566888899 Q ss_pred EEeecCC-CCCcccccCHHHHHHHHHHHHHHHHHHHHHHHHccCCcceEEEeCC-CCCHHHHHHHHHHHHHHhcc----c Q lcl|Aclame:pro 175 LHFKNGI-TLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVG-DLNEDAKKVFRENFESMSSG----L 248 (429) Q Consensus 175 ih~~~~~-~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~-~~~~e~~~~~~~~~~~~~~g----~ 248 (429) +|...+- +.+...-+|-|..|.+.+....-++...--+--..+.-.-+.-++. .+.+.-+++..+.+...++- . T Consensus 236 vy~~SGL~d~~~~~i~syLhkAiKp~NQLkm~EDAlVIYRitRAPeRRvFYIDVGnlPk~KAeqYl~~im~k~kNKlvYD 315 (524) T protein:vir:10 236 VYAHSGLLDCCGKNIIGYLQRAIKPANQLKLMEDAMVIYRITRAPDRRVFYIDTGNMPSRKAAAQMQHIMNTMKNRVVYD 315 (524) T ss_pred eeeccCcccCCCCceeccchHhhHHHHhhHHHHhhHHHHhhhccccceEEEEecCCCCchhHHHHHHHHHHhcCceeEEe Confidence 9986442 2233345677888888777666555554444444455555555553 34444444444444433321 0 Q ss_pred ccccc------ee-ec----------CCCceeEecCCChhHHHHHHHHHHHHHHHHHHhcCChhhcCCccc--cccccHH Q lcl|Aclame:pro 249 QNSHR------IA-LM----------PVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSK--ATLNNIE 309 (429) Q Consensus 249 ~~~~~------~~-vl----------~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~fgvp~~~l~~~~~--~~~~n~~ 309 (429) ...|. .+ .+ ..|.+++.|.-. +.+.-++-..+..+.+.++++||.+-|...+. .+..... T Consensus 316 a~TGev~ddrk~msMlEDyWLpRReGgrgTEItTLpGg-qnlgem~DV~YF~kkLy~aLnVP~sRl~~e~~~~f~~gr~~ 394 (524) T protein:vir:10 316 ASTGKIKNQQHNMSMTEDYWLQRRDGKAVTEVDTMPGA-TGMSDMDDVLYFRTALYRALRIPESRIPSESNSGVMFDAGT 394 (524) T ss_pred ccCCeeccchhhhhhHhhhcccccCCCCccceeecccc-CCcChHHHHHHHHHHHHHHhCCCchhccCCCCccccccccc Confidence 11222 11 12 136777776432 22223355667789999999999999954332 1221211 Q ss_pred HH------HHHHHHHHHhHHHHHHHHHHHHhhccc-----hhhcc---hhhhhhhhhhH----hhh-hHHHHHHHHHHHH Q lcl|Aclame:pro 310 QQ------QQQFYTDTLQATLTMYEQEMTYKLFLD-----SELDK---GFYSKFNVDAI----LRA-DIKTRYEAYRTGI 370 (429) Q Consensus 310 ~~------~~~~~~~~l~P~~~~i~~~l~~~ll~~-----~~~~~---~~~~~fd~~~l----~~~-d~~~~~~~~~~~~ 370 (429) +- ...|+..-=.-+...|.+.|.+.|..+ .++.. .+++.|..|.. ... -+..|...+..+- T Consensus 395 EItRDEiKF~KFI~rLR~rFs~lf~~~L~~qLilKgiit~eew~~i~~~I~~~f~~Dn~f~ElKe~Eil~~R~~~l~~~d 474 (524) T protein:vir:10 395 AITRDELKFAKWIRQLQNKFEEIFLDPLKTNLILKKIITEDEWEREINNIKVTFNRDSYFSEMKDAEIMERRINMLTMAE 474 (524) T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCHHHHHHHhhcceEEeeecchHHHHHHHHHHHHHHHHHHHhh Confidence 21 122222222223334444444443322 22211 12233322221 111 1223333333331 Q ss_pred h--CCCCCHHHHHH-HhCCCCCC--CcceeeeccccccccccccccCCCCCCCCCCCCCCCCCC Q lcl|Aclame:pro 371 Q--GGFLKPNEARS-KEDLPPEA--GGDRLLVNGNMLPIDMAGQAYLKGGDTNGEVSKEGNEGN 429 (429) Q Consensus 371 ~--~g~~t~NE~R~-~~Gl~~~~--~gD~~~~~~n~~~~~~~~~~~~~~g~~~~~~~~~~~~~n 429 (429) . +..++.+=||+ .|.+...+ ..|+....- .. .+-...+ ++.+++ T Consensus 475 pyvGky~s~~yi~k~ILr~tDeei~~~~k~I~~E----~k-~~~~~~~----------~~~~~~ 523 (524) T protein:vir:10 475 PFIGKYISHQTAMKDFLQMTDEEINQEAKQIEEE----SK-EARFQNP----------DEEEED 523 (524) T ss_pred hhhcccchhHHHHHHHhccCHHHHHHHHHHHHHH----hh-cCCCCCC----------Chhhhc Confidence 1 22345555554 34443221 111100000 00 0000000 000011 No 236 >protein:vir:106282 Length: 521 # NCBI annotation: gp20 portal vertex protein of head # Family: family:all:1036 # MgeID: mge:1474 # MgeName: Aeh1 # Cross-refs: genbank:acc:NP_944108;genbank:gi:38640152;genbank:GeneID:2658030 Probab=87.30 E-value=0.04 Score=28.27 Aligned_cols=408 Identities=12% Similarity=0.105 Sum_probs=176.9 Q ss_pred Cchh-hhhhccccccc-----------c-cccccCCch-H--------------HH-HHhhcCCCCcce-----echhhh Q lcl|Aclame:pro 1 MDSV-KKFFNFEKRQT-----------S-QVIELNKDD-E--------------KL-LEWLGISPSTIS-----VKGKNA 46 (429) Q Consensus 1 Mg~~-~~~~~~~~~~~-----------~-~~~~~~~~~-~--------------~~-~~~~~~~~~~~~-----~~~~~a 46 (429) |.+. -++|++..+.. . ++......+ . .+ ..+.+......+ -..+.. T Consensus 1 m~~~~l~lf~f~~k~~e~~~~~~~~~~~~s~~~p~~~dGa~~I~~~~~~~~~~~~~~~~~~~~~~~~~n~~eLI~~YR~m 80 (521) T protein:vir:10 1 MNPIFLKLLQPWMKDDEKRVQSDLSDRIDSFAVPDTADGAIEVDKQIDTTAPKTAIVQSVLGYAPKIQNTKDLINQYRSL 80 (521) T ss_pred CCcchhHHhhhhhhhhhhHHhhhhccCccccccccCCCCceeeccCCCccccccchhhhhhccccccchHHHHHHHHHHH Confidence 6663 24454433211 0 111111010 0 00 111111110000 013455 Q ss_pred hccHHHHHHHHHHHHhhccC-----ceEEEecCCce---eeeeecchhhhhhcccCcCCCCHHHHHHHHHHHHHhhCCeE Q lcl|Aclame:pro 47 LKVATVFACIKILSESVSKL-----PLKIYQEDEYG---IQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSY 118 (429) Q Consensus 47 ~~~~~v~~~i~~ia~~ia~~-----~~~~~~~~~~~---~~~~~~~~~~~~l~~~PN~~~s~~~~~~~~~~~~l~~G~~~ 118 (429) +.+|.|-.||+.|.+.+.-+ |+.+.-.+-+. .+......+.++|+. -+....+ ..+++.|.+.|..| T Consensus 81 a~~pEvd~Av~eIvneaiv~d~~~~pV~i~Ld~~~~s~~iK~kI~eeF~~Il~l-l~F~~~~----~~~fR~WYVDgRi~ 155 (521) T protein:vir:10 81 SKYHEVDNAIDEIINDAIVQEDNRDTVYLDLDKTDWNESVKEMVREEFRTILKL-LKFEREG----KRHFRRWYVDSRIY 155 (521) T ss_pred hhccchhhHHHhhhcceEEecCCCceEEEEecCcccchHHHHHHHHHHHHHHHH-hccchhh----hHHHhhheeeeeEE Confidence 67899999999999876432 22222211111 011111223344431 2222333 34566778889999 Q ss_pred EEEeeCCC---CceEEEEeeCCcceEEEEcCC-----ccee-eeeeEEEeec--------cc---CceEEEccceEEEee Q lcl|Aclame:pro 119 ANIEFDRK---GKVQALWPIDASKVTVYIDDV-----GLLN-SKTKMWYVVN--------TG---GQQRVLKPEEILHFK 178 (429) Q Consensus 119 ~~~~~~~~---g~~~~l~~l~p~~v~~~~~~~-----~~~~-~~~~~~~~~~--------~~---g~~~~~~~~evih~~ 178 (429) ..++.+.. .-..+|..|+|..|+.++.-. +... .....++.+. .+ +....++.+.|.|.. T Consensus 156 fHkiid~~~pk~GI~Elr~lDPr~i~~vr~i~k~~~~~~~v~~~~~e~f~Y~~~~~~~~~~~g~~~~~vkI~~daI~y~h 235 (521) T protein:vir:10 156 FHKMIDPARPKDGIKELRLLDPRNVEYYRVNLKSNENGNDVYKGVKEFFTYGATEDNRYNISGNSNNLVQIPIDAIVYSH 235 (521) T ss_pred EEEEeeCCCccccceeeeeeCCcceeeeeeecCCCCCcchhhccceeeeeeccCCCceecCCCCCCcceeechhheeeec Confidence 98866532 247899999999997654311 1100 0011111111 11 223457776666655 Q ss_pred cCC-CCCcccccCHHHHHHHHHHHHHHHHHHHHHHHHccCCcceEEEeCC-CCCHHHHHHHHHHHHHHhcc--------- Q lcl|Aclame:pro 179 NGI-TLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVG-DLNEDAKKVFRENFESMSSG--------- 247 (429) Q Consensus 179 ~~~-~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~-~~~~e~~~~~~~~~~~~~~g--------- 247 (429) .+- ..+....+|-|..|.+.+....-++...--+--..+.-.-+.-++. .+.+.-+++..+.+.+.++. T Consensus 236 SGL~d~~~~~i~syLhkAiKp~NQLkm~EDAlVIYRitRAPeRRvFYIDvGnlpk~KAeqYl~~iM~k~kNklVYDa~TG 315 (521) T protein:vir:10 236 SGKVDIDGKTIVGYLHNVIKPANQLKMLEDAMVIYRITRAPERRVFYIDVGTMPNKKATQHLNNVMQGLKNRVVYDSSTG 315 (521) T ss_pred ccceeCCCCceeccchhhhHhHHhhHHHHhhHHHHhhhccccceEEEEecCCCCchhHHHHHHHHHHhcCceEEEeccCc Confidence 332 2345677888999988887776666655444444455555555553 34444444444444433321 Q ss_pred -ccccccee-ec----------CCCceeEecCCChhHHHHHHHHHHHHHHHHHHhcCChhhcCCccc-ccc---ccHHH- Q lcl|Aclame:pro 248 -LQNSHRIA-LM----------PVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSK-ATL---NNIEQ- 310 (429) Q Consensus 248 -~~~~~~~~-vl----------~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~fgvp~~~l~~~~~-~~~---~n~~~- 310 (429) ..+..+.+ .+ ..|.+++.|.-. +.+.-++-..+..+.+.++++||.+-|..... .+. +.+.- T Consensus 316 ev~ddrk~msMlEDyWLpRReGgrgTEI~TLpgg-qnlgem~DV~YF~kkLy~aLnVP~sRl~~e~~~f~~Gr~~EItRD 394 (521) T protein:vir:10 316 KVKNSSNNLAMTEDYWLMRRDGKATTEVSTLPGA-QSMGEMDDVRWFNRKLYESMKIPLSRLPQEGAGVTFGAGNDITRD 394 (521) T ss_pred eeccchhhhhhHhhhcccccCCCCccceeecccc-CCcChHHHHHHHHHHHHHHhCCCccccCCCCCceecccccchhHH Confidence 11111111 12 136777776432 22333455677789999999999999865421 111 11111 Q ss_pred --HHHHHHHHHHhHHHHHHHHHHHHhhccc-----hhhcc---hhhhhhhhhhH----hh-hhHHHHHHHHHHH----Hh Q lcl|Aclame:pro 311 --QQQQFYTDTLQATLTMYEQEMTYKLFLD-----SELDK---GFYSKFNVDAI----LR-ADIKTRYEAYRTG----IQ 371 (429) Q Consensus 311 --~~~~~~~~~l~P~~~~i~~~l~~~ll~~-----~~~~~---~~~~~fd~~~l----~~-~d~~~~~~~~~~~----~~ 371 (429) ....|+..-=.-+...|.+.|.+.|..+ .++.. .+++.|..|.. .. .-+..|...+..+ +- T Consensus 395 EikF~KFI~rLR~rFs~~f~~~L~~qLilKgiit~eew~~i~~~I~~~f~~Dn~f~ElKe~eil~~R~~~l~~~dp~~yv 474 (521) T protein:vir:10 395 ELQFTKYIRGLQQQFEPIFLNPLRTNLMLKGKMSVSEWEEQAENIKVVFSKDSYYEEIKDVEILERRVNLVQTLASAEVT 474 (521) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCHHHHHHHhhcceEEeeecchHHHHHHHHHHHHHHHHHHhhcCcccc Confidence 1122222222223334444444443322 22211 12233322221 11 1123444444444 22 Q ss_pred CCCCCHHHHHH-HhCCCCCC--CcceeeeccccccccccccccCCCCCCCCCCCCCCCCCC Q lcl|Aclame:pro 372 GGFLKPNEARS-KEDLPPEA--GGDRLLVNGNMLPIDMAGQAYLKGGDTNGEVSKEGNEGN 429 (429) Q Consensus 372 ~g~~t~NE~R~-~~Gl~~~~--~gD~~~~~~n~~~~~~~~~~~~~~g~~~~~~~~~~~~~n 429 (429) +.+++.+=||+ .|.+...+ ..++.. . ...+.+ -- .+-++.++| T Consensus 475 Gky~s~dyi~k~ILr~tDeeik~~~k~I--------~----~E~~~~--~~-~~p~~e~~d 520 (521) T protein:vir:10 475 GKYLSHEYVMKNILRMSDEDIKTEREKI--------D----GELKDS--VY-KNPEDPMEE 520 (521) T ss_pred ccccchHHHHHHHhcCCHhHHHHHHHHH--------H----HhhhCC--CC-CCCcchhhc Confidence 33566666664 45554321 011000 0 000000 00 011111122 No 237 >protein:vir:81017 Length: 521 # NCBI annotation: gp20 portal vertex protein of head # Family: family:all:1036 # MgeID: mge:1888 # MgeName: Phi1 # Cross-refs: genbank:acc:YP_001469501;genbank:gi:157311458;genbank:GeneID:5602316 Probab=86.91 E-value=0.042 Score=28.12 Aligned_cols=406 Identities=8% Similarity=0.093 Sum_probs=169.8 Q ss_pred Cchhhhhhcccccc-------cc-cccccCCchHH-HHHh---------hcCCCCccee------------chhhhhccH Q lcl|Aclame:pro 1 MDSVKKFFNFEKRQ-------TS-QVIELNKDDEK-LLEW---------LGISPSTISV------------KGKNALKVA 50 (429) Q Consensus 1 Mg~~~~~~~~~~~~-------~~-~~~~~~~~~~~-~~~~---------~~~~~~~~~~------------~~~~a~~~~ 50 (429) ..++..||++.... +. ++++....+.. .... -|.....+.+ ..+..+.+| T Consensus 5 l~~~~~~~~~~~~~~~~~~~~~~~s~~~P~~~dGa~~i~~~~~~~~~~~gg~~~~~~~~e~~~~~~~eLI~~YR~ma~~p 84 (521) T protein:vir:81 5 LKMLARWADFDNDKYEEQIKDKAESIAAPKNNDGATEVEINDNLPASAWNSLTQQFYSTDQKISTTKQLVNTYRGLMNNH 84 (521) T ss_pred hhhhHhhcCchhhhHHhhhccCccccccCCCCCCceEecccCCCcceeecceeeeecccccchhhHHHHHHHHHHHhhcc Confidence 33444444432211 11 11111111111 0000 0000111111 124456789 Q ss_pred HHHHHHHHHHHhhccC-----ceEEEecCCc---eeeeeecchhhhhhcccCcCCCCHHHHHHHHHHHHHhhCCeEEEEe Q lcl|Aclame:pro 51 TVFACIKILSESVSKL-----PLKIYQEDEY---GIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIE 122 (429) Q Consensus 51 ~v~~~i~~ia~~ia~~-----~~~~~~~~~~---~~~~~~~~~~~~~l~~~PN~~~s~~~~~~~~~~~~l~~G~~~~~~~ 122 (429) .|-.||+.|.+.+.-+ |+.+.-.+-+ +........+.++|+. -+....+ ..+++.|.+.|..|+.++ T Consensus 85 Evd~Av~eIVneaiv~d~~~~pV~l~L~~~~~s~~iK~kI~eeF~~Il~l-l~F~~~~----~~~fR~WYVDgRi~fhki 159 (521) T protein:vir:81 85 EVENAVQNIVNDAIVFEEGHEVVSLNLEATGFSESVKERIHEEFKDLLNT-IQFDRRG----QDMFRRWYVDSRIFFHKI 159 (521) T ss_pred chhhHHHHhhcceeEecCCCceEEEEecccccchHHHHHHHHHHHHHHHH-hccchhh----hHHHhhhhhcceEEEEEE Confidence 9999999999876422 2222211100 0000111223333431 2222333 345666788899999888 Q ss_pred eCCC--CceEEEEeeCCcceEEEEcCCcc------eeeeeeEEEeeccc-------------CceEEEccceEEEeecCC Q lcl|Aclame:pro 123 FDRK--GKVQALWPIDASKVTVYIDDVGL------LNSKTKMWYVVNTG-------------GQQRVLKPEEILHFKNGI 181 (429) Q Consensus 123 ~~~~--g~~~~l~~l~p~~v~~~~~~~~~------~~~~~~~~~~~~~~-------------g~~~~~~~~evih~~~~~ 181 (429) .+.+ .-..+|..|+|..|+.++.-... .......++.|..+ +....++.+-|.+...+. T Consensus 160 id~~pk~GI~Elr~lDPr~i~~vr~i~k~~~~~~~v~~~~~e~f~Y~~~~~~~~~~g~~~~~~~~vkI~~dAI~y~hSGl 239 (521) T protein:vir:81 160 IGKNPKDGIVELRQLDPRNLEYVREIITEDTPEGKIYKATKEYFIYTVGNSSYCAGGQVFSPNSRVKIPRSAITYAHSGL 239 (521) T ss_pred EcCCccccceeeeeeCCcceeeeeeecccccCccceecceeeeeeeecCCccccccceeecCCcceeechhheeeeeccc Confidence 5533 34889999999999876542111 01111112222221 223444555444433221 Q ss_pred -CCCcccccCHHHHHHHHHHHHHHHHHHHHHHHHccCCcceEEEeCC-CCCHHHHHHHHHHHHHHhcc----cccccc-- Q lcl|Aclame:pro 182 -TLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVG-DLNEDAKKVFRENFESMSSG----LQNSHR-- 253 (429) Q Consensus 182 -~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~-~~~~e~~~~~~~~~~~~~~g----~~~~~~-- 253 (429) +.+...-+|-|..|.+.+....-++...--+--..+.-.-+.-++. .+.+.-+++..+.+...|+- ....|. T Consensus 240 ~d~~~~~i~syLhkAiKp~NQLkm~EDAlVIYRitRAPeRRvFYIDvGnlpk~KAeqYl~~im~k~kNklvYDa~TGev~ 319 (521) T protein:vir:81 240 MDCDDKYIIGYLHRAVKPANQLKLLEDAMVVYRITRAPERRVFFIDTGNMNNRKAAQHMNSVAQSFKNRVVYDASTGKLK 319 (521) T ss_pred eeCCCCeeeecchhhhHhHHhhHHHHhhHHHHhhhccccceEEEEecCCCCchhHHHHHHHHHHhcCceeEeeccccccc Confidence 2222234577888888777666555554444444455555555553 34444455545544444432 111222 Q ss_pred ----e-eecC----------CCceeEecCC--ChhHHHHHHHHHHHHHHHHHHhcCChhhcCCcccc--c---cccHHH- Q lcl|Aclame:pro 254 ----I-ALMP----------VGYQFQPISL--NMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKA--T---LNNIEQ- 310 (429) Q Consensus 254 ----~-~vl~----------~g~~~~~~~~--~~~d~~~~e~~~~~~~~Ia~~fgvp~~~l~~~~~~--~---~~n~~~- 310 (429) . ..++ .|.+++.+.- +..++ +-..+..+.+.++++||.+-|...+.+ + .+.+.- T Consensus 320 ddrk~msMlEDyWLpRReGgrgTEItTLpGgqnlgem---~DV~YF~kkLy~aLnVP~sRl~~e~~~~~~~Gr~~EItRD 396 (521) T protein:vir:81 320 NQQANLSMTEDYWLQRRDGKAITDVTTLPGASGMSDI---DDIRYFNRKLYEALRVPLSRSNLSDANMVIGGDGSEITRD 396 (521) T ss_pred ccccccchhhhhcccccCCCcccceeecccCCCCChH---HHHHHHHHHHHHHhCCccccccCCCCcceeccccchhhHH Confidence 1 2221 3677777643 33444 556677899999999999999543321 1 111111 Q ss_pred --HHHHHHHHHHhHHHHHHHHHHHHhhccchhhcch--------hhhhhhhhhH----hhh-hHHHHHHHHHHHHh--CC Q lcl|Aclame:pro 311 --QQQQFYTDTLQATLTMYEQEMTYKLFLDSELDKG--------FYSKFNVDAI----LRA-DIKTRYEAYRTGIQ--GG 373 (429) Q Consensus 311 --~~~~~~~~~l~P~~~~i~~~l~~~ll~~~~~~~~--------~~~~fd~~~l----~~~-d~~~~~~~~~~~~~--~g 373 (429) ....|+..-=.-+...|.+.|.+.|..+.-.... +++.|..|.. ... -+..|...+..+-. +. T Consensus 397 EiKF~KFI~rLR~rFs~lf~~~L~~qLilKgiit~eew~~i~~~I~~~f~~Dn~f~ElKe~Eil~~R~~~l~~~dpyvGk 476 (521) T protein:vir:81 397 ELEFSKFIRTRQSQFSEVLRDPLKYNLILKNVITEDDWDREINNIKVVFHRDSYYTEVKDAEILERRIGLIERITPYIGK 476 (521) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCHHHHHHHhhcceEEEeecchHHHHHHHHHHHHHHHHHHHhhhhhcc Confidence 1222333222233444444554444333222111 2333333321 111 12233333333311 22 Q ss_pred CCCHHHHHH-HhCCCCCC--CcceeeeccccccccccccccCCCCCCCCCCCCCCCCCC Q lcl|Aclame:pro 374 FLKPNEARS-KEDLPPEA--GGDRLLVNGNMLPIDMAGQAYLKGGDTNGEVSKEGNEGN 429 (429) Q Consensus 374 ~~t~NE~R~-~~Gl~~~~--~gD~~~~~~n~~~~~~~~~~~~~~g~~~~~~~~~~~~~n 429 (429) .++.+=||+ .|.+...+ ..|+.. . ...+.+--. +-++++++ T Consensus 477 y~s~dyi~k~ILr~tDeei~~~~k~I--------~----~E~~~~~~~---~p~~~~~~ 520 (521) T protein:vir:81 477 YFSNQTVMRDILKYTDDQMDTEKKQI--------E----EEANDPRFK---QTPDEIED 520 (521) T ss_pred ccchHHHHHHHhccCHHHHHHHHHHH--------H----HHhhCCCCC---CCcccccC Confidence 345555554 34443221 111100 0 000000000 00001111 No 238 >protein:vir:6596 Length: 521 # NCBI annotation: portal vertex protein of head # Family: family:all:1036 # MgeID: mge:139 # MgeName: RB49 # Cross-refs: genbank:acc:NP_891727;genbank:gi:33620636;genbank:GeneID:1725288 Probab=82.21 E-value=0.079 Score=26.63 Aligned_cols=406 Identities=8% Similarity=0.101 Sum_probs=168.9 Q ss_pred Cchhhhhhcccc-------ccccccc--ccCCchHHHH---------HhhcCCCCccee------------chhhhhccH Q lcl|Aclame:pro 1 MDSVKKFFNFEK-------RQTSQVI--ELNKDDEKLL---------EWLGISPSTISV------------KGKNALKVA 50 (429) Q Consensus 1 Mg~~~~~~~~~~-------~~~~~~~--~~~~~~~~~~---------~~~~~~~~~~~~------------~~~~a~~~~ 50 (429) ..+|..|++... +.+..+. +-..++...+ .+-|...+.+.+ ..+..+.+| T Consensus 5 l~~~~~~~~~d~~~~~e~~~~~~~s~~~p~~~dGa~~i~~~~~~~~~~~~g~~~~~~~~e~~~~~~~eLI~~YR~ma~~p 84 (521) T protein:vir:65 5 LKMLARWADFDNDKYEEQIKDKAESIAAPKNNDGATEVEINDNSPASSWNSLTQQFYSTDQKISTTKQLVNTYRGLMNNH 84 (521) T ss_pred hhhhhhccCchhhHHHhhhccCCCcccCCCCCCCceeecccCCccccccccceeeeccccchhhhHHHHHHHHHHHhhcc Confidence 233333332211 0111111 1111111000 001111111111 124456689 Q ss_pred HHHHHHHHHHHhhccC-----ceEEEecCCc---eeeeeecchhhhhhcccCcCCCCHHHHHHHHHHHHHhhCCeEEEEe Q lcl|Aclame:pro 51 TVFACIKILSESVSKL-----PLKIYQEDEY---GIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIE 122 (429) Q Consensus 51 ~v~~~i~~ia~~ia~~-----~~~~~~~~~~---~~~~~~~~~~~~~l~~~PN~~~s~~~~~~~~~~~~l~~G~~~~~~~ 122 (429) .|-.||+.|.+.+.-+ |+.+.-.+-+ +........+.++|+. -+....+ ..+++.|.+.|..|+.++ T Consensus 85 Evd~Av~eIVneaiv~d~~~~pV~l~L~~~~~s~~iK~kI~eeF~~Il~l-l~F~~~~----~~~fR~WYVDgRi~fhki 159 (521) T protein:vir:65 85 EVENAVQNIVNDAIVFEEGHEVVSLNLEATGFSESVKERIHEEFKDLLNT-IQFDRRG----QDMFRRWYVDSRIFFHKI 159 (521) T ss_pred chhhHHHHhhcceeEecCCCceEEEEecccccchHHHHHHHHHHHHHHHH-hccchhh----hHHHhhhhhcceeEEEEE Confidence 9999999999876422 2222111100 0000111223334431 2222333 345666788899999888 Q ss_pred eCCC--CceEEEEeeCCcceEEEEcCCcc------eeeeeeEEEeecc-------------cCceEEEccceEEEeecC- Q lcl|Aclame:pro 123 FDRK--GKVQALWPIDASKVTVYIDDVGL------LNSKTKMWYVVNT-------------GGQQRVLKPEEILHFKNG- 180 (429) Q Consensus 123 ~~~~--g~~~~l~~l~p~~v~~~~~~~~~------~~~~~~~~~~~~~-------------~g~~~~~~~~evih~~~~- 180 (429) .+.+ .-..+|..|+|..|+.++.-... .......++.|.. .+....++.+-|.+...+ T Consensus 160 id~~pk~GI~ELr~lDPr~i~~vr~i~k~~~~~~~v~~~~~e~f~Y~~~~~~~~~~g~~~~~~~~vkI~~dAI~y~hSGl 239 (521) T protein:vir:65 160 IGKNPKDGIVELRQLDPRNLEYVREIITEDTPEGKIYKATKEYFIYTVGNSSYCAGGQVFSPNSRVKIPRSAITYAHSGL 239 (521) T ss_pred EcCCccccceeeeeeCCcceeeeeeecccccCCcceecceeeeeeeecCCcceeccceeecCCcceeechhheeeeeccc Confidence 5533 34889999999999876542111 1111111222221 122344455544444322 Q ss_pred CCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHHccCCcceEEEeCC-CCCHHHHHHHHHHHHHHhcc----cccccc-- Q lcl|Aclame:pro 181 ITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVG-DLNEDAKKVFRENFESMSSG----LQNSHR-- 253 (429) Q Consensus 181 ~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~-~~~~e~~~~~~~~~~~~~~g----~~~~~~-- 253 (429) -+.+...-+|-|..|.+.+....-++...--+--..+.-.-+.-++. .+.+.-+++..+.+...|+- ....|. T Consensus 240 ~d~~~~~i~syLhkAiKp~NQLkm~EDAlVIYRitRAPeRRvFYIDvGnlPk~KAeqYl~~im~k~kNklvYDa~TGev~ 319 (521) T protein:vir:65 240 MDCDDKYIIGYLHRAVKPANQLKLLEDAMVVYRITRAPERRVFFIDTGNMNNRKAAQHMNSVAQSFKNRVVYDASTGKLK 319 (521) T ss_pred eeCCCCeeeecchhhhHhHHhhHHHHhhHHHHhhhccccceEEEEecCCCCchhHHHHHHHHHHhcCceeEeeccccccc Confidence 12223334577888888777666555554444444455555555553 34444445545544444432 111222 Q ss_pred ----e-eecC----------CCceeEecCC--ChhHHHHHHHHHHHHHHHHHHhcCChhhcCCccccc-----cccHHH- Q lcl|Aclame:pro 254 ----I-ALMP----------VGYQFQPISL--NMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKAT-----LNNIEQ- 310 (429) Q Consensus 254 ----~-~vl~----------~g~~~~~~~~--~~~d~~~~e~~~~~~~~Ia~~fgvp~~~l~~~~~~~-----~~n~~~- 310 (429) . ..++ .|.+++.|.- +..++ +-..+..+.+.++++||.+-+...+.+. .+.+.- T Consensus 320 ddrk~msMlEDyWLpRReGgrgTEItTLpGgqnlgem---~DV~YF~kkLy~aLnVP~sRl~~e~~~~~~~gr~~EItRD 396 (521) T protein:vir:65 320 NQQANLSMTEDYWLQRRDGKAITDVTTLPGASGMSDI---DDIRYFNRKLYEALRVPLSRSNLSDANMVIGGDGSEITRD 396 (521) T ss_pred ccccccchhhhhcccccCCCCccceeecccCCCcChH---HHHHHHHHHHHHHhCCCceeccCCCCcceeccccchhhHH Confidence 1 2221 3677777643 33444 5566778999999999999975433221 111111 Q ss_pred --HHHHHHHHHHhHHHHHHHHHHHHhhccchhhcch--------hhhhhhhhhH----hhh-hHHHHHHHHHHHHh--CC Q lcl|Aclame:pro 311 --QQQQFYTDTLQATLTMYEQEMTYKLFLDSELDKG--------FYSKFNVDAI----LRA-DIKTRYEAYRTGIQ--GG 373 (429) Q Consensus 311 --~~~~~~~~~l~P~~~~i~~~l~~~ll~~~~~~~~--------~~~~fd~~~l----~~~-d~~~~~~~~~~~~~--~g 373 (429) ....|+..-=.-+...|.+.|.+.|..+.-.... +++.|..|.. ... -+..|...+..+-. +. T Consensus 397 EiKF~KFI~rLR~rFs~lf~~~L~~qLilKgiit~eew~~i~~~I~~~f~~Dn~f~ElKe~Eil~~R~~~l~~~dpyvGk 476 (521) T protein:vir:65 397 ELEFSKFIRTLQSQFSEVLRDPLKYNLILKNVITEDDWDREINNIKVVFHRDSYYTEVKDAEILERRIGLIERITPYIGK 476 (521) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCHHHHHHHhhcceEEeeecchHHHHHHHHHHHHHHHHHHHhhhhhcc Confidence 1222333222233444444454444333221111 2333333321 111 12233333333311 22 Q ss_pred CCCHHHHHH-HhCCCCCC--CcceeeeccccccccccccccCCCCCCCCCCCCCCCCCC Q lcl|Aclame:pro 374 FLKPNEARS-KEDLPPEA--GGDRLLVNGNMLPIDMAGQAYLKGGDTNGEVSKEGNEGN 429 (429) Q Consensus 374 ~~t~NE~R~-~~Gl~~~~--~gD~~~~~~n~~~~~~~~~~~~~~g~~~~~~~~~~~~~n 429 (429) .++.+=||+ .|.+...+ ..|+.. . ...+.+--. +-++++++ T Consensus 477 y~S~dyi~k~ILr~tDeei~~~~k~I--------~----~E~~~~~~~---~p~~~~~~ 520 (521) T protein:vir:65 477 YFSNQTVMRDILKYTDDQMDTEKKQI--------E----EEANDPRFK---QTPDEIED 520 (521) T ss_pred ccchHHHHHHHhccCHHHHHHHHHHH--------H----HhhhCCCCC---CCcccccC Confidence 346665654 34543321 111100 0 000000000 00001111 No 239 >protein:vir:5665 Length: 511 # NCBI annotation: portal vertex protein of head # Family: family:all:1036 # MgeID: mge:119 # MgeName: KVP40 # Cross-refs: genbank:acc:NP_899604;genbank:gi:34419591;genbank:GeneID:2546036 Probab=79.11 E-value=0.11 Score=25.89 Aligned_cols=405 Identities=11% Similarity=0.100 Sum_probs=174.6 Q ss_pred Cchhhhhhcc-----cccccccccccCCchHH--H------HHhhcC-CCCccee-----------chhhhhccHHHHHH Q lcl|Aclame:pro 1 MDSVKKFFNF-----EKRQTSQVIELNKDDEK--L------LEWLGI-SPSTISV-----------KGKNALKVATVFAC 55 (429) Q Consensus 1 Mg~~~~~~~~-----~~~~~~~~~~~~~~~~~--~------~~~~~~-~~~~~~~-----------~~~~a~~~~~v~~~ 55 (429) |.+|.+-=.. .+....++.+....+.. + ....|. -.+.... ..++...+|.|-.| T Consensus 1 ~~~w~~~de~~~~~~~~~~~~S~~~p~~~DGa~~i~~~~~~~~~~g~~~~~~~~~~~~~~~~eLI~~YR~ma~~pEvd~A 80 (511) T protein:vir:56 1 MKFWTKEEEQDIQKIEKNPVRSFSAPDNVDGAKEIHTNLLAPQLGHAIIPSDAQSEGTIPVKELIKSYRALAEYHEVDDA 80 (511) T ss_pred CCCccchhhhhhhhhccCCcccccCCCCCCCceEEecccccceecceeccccccccCccchHHHHHHHHHHhhccchhhH Confidence 4444321110 00011011111111110 0 000010 0000000 12445678999999 Q ss_pred HHHHHHhhccC-----ceEEEecCCc---eeeeeecchhhhhhcccCcCCCCHHHHHHHHHHHHHhhCCeEEEEeeCCCC Q lcl|Aclame:pro 56 IKILSESVSKL-----PLKIYQEDEY---GIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKG 127 (429) Q Consensus 56 i~~ia~~ia~~-----~~~~~~~~~~---~~~~~~~~~~~~~l~~~PN~~~s~~~~~~~~~~~~l~~G~~~~~~~~~~~g 127 (429) |+.|.+.+.-+ |+.+.-.+-+ +........+.++|+. -+....+ ..++..|.+.|..|..++.++.. T Consensus 81 v~eIvne~iv~d~~~~pV~l~ld~~~~s~~iK~kI~eeF~~Il~l-l~F~~~~----~~~fR~WYVDgRi~fHkiid~k~ 155 (511) T protein:vir:56 81 IQEIVDEAIVYENDKEVVWLNLDNTDFSENIKAKINEEFDRVVSL-LQMRKHG----YKWFRKWYVDSRIYFHKILDKDN 155 (511) T ss_pred HHHhhcceeEecCCCceEEEEecccCcchHHHHHHHHHHHHHHHH-hccchhh----hHHHhhhhhcceEEEEEEecccc Confidence 99999876422 2222211110 0000111223334431 2222333 34566677889999988877666 Q ss_pred ceEEEEeeCCcceEEEEcCC-----cc-eeeeeeEEEeeccc--------------CceEEEccceEEEeecCC---CCC Q lcl|Aclame:pro 128 KVQALWPIDASKVTVYIDDV-----GL-LNSKTKMWYVVNTG--------------GQQRVLKPEEILHFKNGI---TLD 184 (429) Q Consensus 128 ~~~~l~~l~p~~v~~~~~~~-----~~-~~~~~~~~~~~~~~--------------g~~~~~~~~evih~~~~~---~~~ 184 (429) -..+|..|+|..++.++.-. +. .......++.|... .....++.+.|.|...+. +.+ T Consensus 156 GI~eLr~lDPr~i~~vr~i~~~~~~~~~v~~~~~ey~~Y~~~~~~~~~~~~~~~~~~~~vkI~~daI~y~hSGL~d~~~~ 235 (511) T protein:vir:56 156 NIIELRPLNPMKMELVREIQKETIDGVEVVKGTLEYYVYKQSDYKMPSWMSATNRAQTSFRIPKDAIVFAHSGLMRGCAD 235 (511) T ss_pred ceeehhhcCcccchhhhhhhcccccccccccceeeeeEecCCCcccCcccccccccccceeechhheeeecccceeccCC Confidence 68999999999987654311 00 01111222222221 133668889997776543 245 Q ss_pred cccccCHHHHHHHHHHHHHHHHHHHHHHHHccCCcceEEEeCC-CCCHHHHHHHHHHHHHHhcc----------cccccc Q lcl|Aclame:pro 185 GLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVG-DLNEDAKKVFRENFESMSSG----------LQNSHR 253 (429) Q Consensus 185 ~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~-~~~~e~~~~~~~~~~~~~~g----------~~~~~~ 253 (429) ..+.+|-|..|.+.+....-++...--+--..+.-.-+.-++. .+.+.-+++..+.+.+.++. ..+..+ T Consensus 236 ~g~i~syLhkAiKp~NQLkm~EDAlVIYRitRAPeRRvFYIDVGnLPk~KAeqYl~~iM~k~kNklVYDa~TGev~ddrk 315 (511) T protein:vir:56 236 DPYIIGYLDRAIKPANQLKMLEDALVIYRLARAPERRVFYVDVGNLPTQKAQQYVNGIMQNVKNRVVYDTQTGQVKNTTN 315 (511) T ss_pred CCeeeccchhhhHHHHhhHHHHhhHHHHhhhccccceEEEEecCCCCchhHHHHHHHHHHhcCceEEEeccCceeccchh Confidence 5567888999988887776666655444444455555555553 34444444444444433321 111112 Q ss_pred ee-ec----------CCCceeEecCCChhHHHHHHHHHHHHHHHHHHhcCChhhcCCccc---cccccHHHH------HH Q lcl|Aclame:pro 254 IA-LM----------PVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSK---ATLNNIEQQ------QQ 313 (429) Q Consensus 254 ~~-vl----------~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~fgvp~~~l~~~~~---~~~~n~~~~------~~ 313 (429) .+ .+ ..|.+++.|.-. +.+.-++-..+....+.++++||.+-|...+. -+.....+- .. T Consensus 316 ~msMlEDyWLpRReGgrgTEItTLpGg-qnlgem~DV~YF~kKLy~aLnVP~SRl~~e~q~~~f~~Gr~~EItRDEiKF~ 394 (511) T protein:vir:56 316 AMSMLEDYYLPRREGSKGTEVSTLPGG-QSLGDIEDVLYFNRKLYKAMRIPTSRAASEDQTGGINFGQGAEITRDELKFT 394 (511) T ss_pred hhhhHhhhcccccCCCCccceeecccc-CCcChHHHHHHHHHHHHHHhCCCcccccCCCCccccccccchhhhHHHHHHH Confidence 11 12 136777776432 22223355667789999999999999974322 121111111 12 Q ss_pred HHHHHHHhHHHHHHHHHHHHhhccc-----hhhcc---hhhhhhhhhhH----hhh-hHHHHHHHHHHHH--hCCCCCHH Q lcl|Aclame:pro 314 QFYTDTLQATLTMYEQEMTYKLFLD-----SELDK---GFYSKFNVDAI----LRA-DIKTRYEAYRTGI--QGGFLKPN 378 (429) Q Consensus 314 ~~~~~~l~P~~~~i~~~l~~~ll~~-----~~~~~---~~~~~fd~~~l----~~~-d~~~~~~~~~~~~--~~g~~t~N 378 (429) .|+..-=.-+...|.+.|.+.|..+ .++.. .+++.|..|.. ... -+..|...+..+- -+..++.+ T Consensus 395 KFI~RLR~rFs~lF~~~Lk~qLilKgiit~eeW~~i~~~I~~~f~~Dn~f~ElKe~Eil~~Rl~~l~~~dpyvGky~S~~ 474 (511) T protein:vir:56 395 KFVKRLQTKFETVITDPLKHQLIVNNIITEEEWDANHEKLYVVFNQDSYFEEAKELEILNSRMNAMRDIQDYAGKYYSHK 474 (511) T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhccCCCHHHHHHHhhcceEEeeecchHHHHHHHHHHHHHHHHHHHhcchhccccchH Confidence 2222222223334444444443322 22211 12333332221 111 1223333333321 12234666 Q ss_pred HHHH-HhCCCCCC--CcceeeeccccccccccccccCCCCCCCCCCCCCCCCCC Q lcl|Aclame:pro 379 EARS-KEDLPPEA--GGDRLLVNGNMLPIDMAGQAYLKGGDTNGEVSKEGNEGN 429 (429) Q Consensus 379 E~R~-~~Gl~~~~--~gD~~~~~~n~~~~~~~~~~~~~~g~~~~~~~~~~~~~n 429 (429) =+|+ .|.+...+ ..++....-.-.|+ -+. .|.+ T Consensus 475 yi~k~ILr~tDeei~~~~k~I~~E~k~~~-------~~~-----------~e~~ 510 (511) T protein:vir:56 475 YIQKNILRLSDDQITAMQSEIDEEETNPR-------FQQ-----------DDQG 510 (511) T ss_pred HHHHHHhccCHHHHHHHHHHHHHhhcCCC-------CCC-----------cccC Confidence 5654 34443221 11110000000000 000 0000 No 240 >protein:vir:78393 Length: 489 # NCBI annotation: putative structural protein # Family: family:all:584 # MgeID: mge:1851 # MgeName: SETP3 # Cross-refs: genbank:acc:YP_001110831;genbank:gi:134288592;genbank:GeneID:5179656 Probab=77.62 E-value=0.12 Score=25.58 Aligned_cols=398 Identities=11% Similarity=0.029 Sum_probs=165.2 Q ss_pred hhcccccccccccc------cCCchHHHHHhhcCCC------Ccce-----ec---hhh----hhccHHHHHHHHHHHHh Q lcl|Aclame:pro 7 FFNFEKRQTSQVIE------LNKDDEKLLEWLGISP------STIS-----VK---GKN----ALKVATVFACIKILSES 62 (429) Q Consensus 7 ~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~------~~~~-----~~---~~~----a~~~~~v~~~i~~ia~~ 62 (429) +..--.+...-... ....+..+-+.+++.. .+.. .+ ... |.-.+++...++.++.. T Consensus 1 ~~~~~~~~~~V~~~hp~y~a~~~~W~~ird~~~G~~~~~~r~~yl~~~~~~~~e~~Y~~rl~rA~~~n~~~~tl~~l~G~ 80 (489) T protein:vir:78 1 MLTENGQGSGVKTKHREWLHYAPKWQKVRHALAGELVSYLRNVGLNEPDKAYGEARQAEYEAGGIVYNFTRRTLSGMVGS 80 (489) T ss_pred CccCCCccCCCCccCHHHHHHHHHHHHHHHHhcCcccccccCCCCCCCCCCCChHHHHHHHhccccCChHHHHHHHHhch Confidence 11100000000000 0001111111111110 0000 00 111 11235556666666666 Q ss_pred hccCceEEEecCCceeeeeecchhhhhhcccCcCCCCHHHHHHHHHHHHHhhCCeEEEEeeCCCCc-----------eEE Q lcl|Aclame:pro 63 VSKLPLKIYQEDEYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGK-----------VQA 131 (429) Q Consensus 63 ia~~~~~~~~~~~~~~~~~~~~~~~~~l~~~PN~~~s~~~~~~~~~~~~l~~G~~~~~~~~~~~g~-----------~~~ 131 (429) +-+-|..+. ....+..++...--...+-.+|.+.++...+.+|-+++++.....|. ..- T Consensus 81 vfrk~p~~~----------~p~~l~~l~~d~D~~G~~L~~f~~~~~~~~l~~G~~~ilVD~P~~~~~T~ade~~~~~rPy 150 (489) T protein:vir:78 81 VMRKEPEIN----------IPKELEYLLKNADGSGVGLIQHAQDTLMEIDSVGRGGLLVDAPETGAATAAEQNAGLLNPT 150 (489) T ss_pred hhcCCccee----------ccHHHHHHHhccCCCCCCHHHHHHHHHHHHHhcCeEEEEEeeCCCCCcCHHHHHHhcCCcE Confidence 655554431 12345566655566677889999999999999999999998765442 112 Q ss_pred EEeeCCcceE-----------------EE-----EcC-CcceeeeeeEEEeec--ccC-------------ceE----EE Q lcl|Aclame:pro 132 LWPIDASKVT-----------------VY-----IDD-VGLLNSKTKMWYVVN--TGG-------------QQR----VL 169 (429) Q Consensus 132 l~~l~p~~v~-----------------~~-----~~~-~~~~~~~~~~~~~~~--~~g-------------~~~----~~ 169 (429) +..+.|..|- +. .+. +.........++... .+| ... .+ T Consensus 151 ~~~~~~~~IinW~~~~v~G~~~Lt~v~lrE~~~~~d~~~~f~~~~~~q~RvL~~~~~g~~~~~~~r~~~~g~~~~~~~~~ 230 (489) T protein:vir:78 151 IAFYTTENIVNWRLTRVGSVNRVTMVVLRETWEYNEPGNEFETKYGEQYRVLDIDSDGNYRQRLFRFDAEGGAQEDVVEI 230 (489) T ss_pred EEEechhhhcCceeeeeCCccceeEEEEEEeEEeecCCCCccceeEEEEEEEecCCCcceEEEEEEeecCCcccceeeEE Confidence 4444443331 00 010 000000000011100 011 100 00 Q ss_pred c------cceEEEee--cCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHHccCCcceEEEeCCCCCHHHHHHHHHHH Q lcl|Aclame:pro 170 K------PEEILHFK--NGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGDLNEDAKKVFRENF 241 (429) Q Consensus 170 ~------~~evih~~--~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~~e~~~~~~~~~ 241 (429) . .-.+|-|- .....+...+.+|+..++..--.......-....+...+.|..+++--...+++..+.... T Consensus 231 ~~~~g~~~l~~IPfv~~~~~~~~~~~~~pPLl~LA~lni~Hy~~ssd~~~~l~~~~~P~l~i~G~d~~~~~~~~~~~~-- 308 (489) T protein:vir:78 231 YPDLGESLRGVIPFTFIGATNNDATIDDAPLLPLAELNIGHYRNSADNEESSFVVGQPTLFIYPGENLTPQAFKEANP-- 308 (489) T ss_pred eccCCCCccCeeeEEEEecCCCCCCCCcCchHHHHHHHHHHhhhhhHHHHHHHHcccceeeeecCccCCcccccccCc-- Confidence 0 00111111 1122234457888877766554444444455566677778888877544455444332221 Q ss_pred HHHhcccccccceeecCCCceeEecCCChhHHHHHHHHHHHHHHHHHHhcCChhhcCCccccccccHHHHHHHHHHHHHh Q lcl|Aclame:pro 242 ESMSSGLQNSHRIALMPVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKATLNNIEQQQQQFYTDTLQ 321 (429) Q Consensus 242 ~~~~~g~~~~~~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~fgvp~~~l~~~~~~~~~n~~~~~~~~~~~~l~ 321 (429) ....-|. +..+.++.+.++.-+..++..+. .+.++....+.+ ..| ..++.- .....+.........-.+.|. T Consensus 309 ~~i~~g~---~~~~~lp~~~~~~~ie~~~~~~~-r~~l~~le~qm~-~lG--a~l~~~-~~~~Ta~~~~~~~~~~~S~L~ 380 (489) T protein:vir:78 309 NGIKFGS---RRGHNLGYGGSAQLIQAGENNLA-RQNMLDKEQQAI-QIG--AQLITP-TQQITAQSARIQRGADTSVMA 380 (489) T ss_pred cceeeCC---cccccCCCCCCcceeccCcchHH-HHHHHHHHHHHH-HHh--hhhccC-CcchhHHHHHHHHHHhhHHHH Confidence 0111232 33566666655444444444432 222322222222 222 233321 111222333344455577788 Q ss_pred HHHHHHHHHHHHhhccchhh-----cchhhhhhhhhhHhhhhHHHHHHHHHHHHhCCCCCHHHHHHHhCCCCCCCcceee Q lcl|Aclame:pro 322 ATLTMYEQEMTYKLFLDSEL-----DKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEAGGDRLL 396 (429) Q Consensus 322 P~~~~i~~~l~~~ll~~~~~-----~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~Gl~~~~~gD~~~ 396 (429) -++..+++.+++.|-.-..+ .....|..+.+-....-.....+++.+++.+|.|+....++.+-.-.+.+.+ T Consensus 381 ~~a~~~e~al~~~l~~~a~w~G~~~~~~~~i~~n~dF~~~~~d~~~~~al~~~~~~G~is~~t~~~~L~~~gv~d~~--- 457 (489) T protein:vir:78 381 TIARNVSQAYTDALRWVAVMLGKPEDTEVEFRLNMDFFLEPMTAQDRAAWMADINAGLLPATAYYAALRKAGVTDWT--- 457 (489) T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCCCceEEEeecccCcccCCHHHHHHHHHHHhcCCCCHHHHHHHHHhCCCCCcc--- Confidence 88888998888764221111 1111222222211121123345667778899999998888765432221100 Q ss_pred eccccccccccccccCCCCCCCCCCCCCCCCCC Q lcl|Aclame:pro 397 VNGNMLPIDMAGQAYLKGGDTNGEVSKEGNEGN 429 (429) Q Consensus 397 ~~~n~~~~~~~~~~~~~~g~~~~~~~~~~~~~n 429 (429) .-..-.....++...+++..++-+.+..+.. T Consensus 458 --~e~~~~ei~~~~~~~~~~~~g~~~~~~q~~~ 488 (489) T protein:vir:78 458 --DADIKDAVADQPLPVATEVQGEIPQSAQQQE 488 (489) T ss_pred --HHHHHHHHhhcCCCcccCCcccCCCCccccc Confidence 0000000001111122222222222222222 No 241 >protein:vir:6896 Length: 523 # NCBI annotation: gp20 portal vertex protein of head # Family: family:all:1036 # MgeID: mge:140 # MgeName: RB69 # Cross-refs: genbank:acc:NP_861872;genbank:gi:32453663;genbank:GeneID:1494298 Probab=65.86 E-value=0.28 Score=23.64 Aligned_cols=408 Identities=10% Similarity=0.092 Sum_probs=168.5 Q ss_pred Cch-hhhhhccccccc------------ccccccCCchH--HHH-H--------------hhcCCCCccee------chh Q lcl|Aclame:pro 1 MDS-VKKFFNFEKRQT------------SQVIELNKDDE--KLL-E--------------WLGISPSTISV------KGK 44 (429) Q Consensus 1 Mg~-~~~~~~~~~~~~------------~~~~~~~~~~~--~~~-~--------------~~~~~~~~~~~------~~~ 44 (429) |.+ +-++|++..+.. .++++....+. .+. . +++.......- ..+ T Consensus 1 m~f~~~~lf~f~~~~de~~~~~~~~~~~~S~~~p~~dDGa~~i~~~~~~~~~~~~~~~q~~y~~~e~~~~~~~eLI~~YR 80 (523) T protein:vir:68 1 MKFNILSLFAPWAKMDERDYKDQEKENLESITSPKLDDGAKEYEVSENEAQQTYNAMFQRMFGSQEPGLKSTRELIDTYR 80 (523) T ss_pred CCCchhhhhhhhhhhhhhhhhhhhhccCCCccccCCCCcceeeeccccccccccchhhhhhhhccccccchHHHHHHHHH Confidence 776 234555443310 01111111110 000 0 11110000000 124 Q ss_pred hhhccHHHHHHHHHHHHhhccCc-----eEEEecCCc---eeeeeecchhhhhhcccCcCCCCHHHHHHHHHHHHHhhCC Q lcl|Aclame:pro 45 NALKVATVFACIKILSESVSKLP-----LKIYQEDEY---GIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGN 116 (429) Q Consensus 45 ~a~~~~~v~~~i~~ia~~ia~~~-----~~~~~~~~~---~~~~~~~~~~~~~l~~~PN~~~s~~~~~~~~~~~~l~~G~ 116 (429) ..+.+|.|-.||+.|.+.+.-+. +.+.-.+-+ +........+.++|+. ++...--..+++.|.+.|. T Consensus 81 ~ma~~pEvd~Av~eIVneaiv~d~~~~pV~i~Ld~~~~s~~iK~kI~eeF~~Il~l-----l~F~~~~~~~fR~WYVDgR 155 (523) T protein:vir:68 81 NLMTNYEVDNAVSEIVSDAIVYEDDTEVVSINLDNTKFSPNIKSMMLDEFNEVLNH-----LSFQRKGSDHFRRWYVDSR 155 (523) T ss_pred HHhhccchhhHHHHhhcceeeecCCCceEEEEecccccchHHHHHHHHHHHHHHHH-----hccchhhhHHHHhheeeeE Confidence 45678999999999998764322 222111110 0000111223344431 2222233445667788899 Q ss_pred eEEEEeeCCC---CceEEEEeeCCcceEEEEcC-----Ccce-eeeeeEEEeec-------cc------CceEEEccceE Q lcl|Aclame:pro 117 SYANIEFDRK---GKVQALWPIDASKVTVYIDD-----VGLL-NSKTKMWYVVN-------TG------GQQRVLKPEEI 174 (429) Q Consensus 117 ~~~~~~~~~~---g~~~~l~~l~p~~v~~~~~~-----~~~~-~~~~~~~~~~~-------~~------g~~~~~~~~ev 174 (429) .|..++.+.. .-..+|..|+|..|+.++.- .+.. ......+|.+. .+ +....++.+-| T Consensus 156 i~fhKiid~k~pk~GI~Elr~lDPr~i~~vr~i~~~~~~g~~vi~~~~e~f~Y~~~~~~~~~~g~~~~~~~~ikI~~dAI 235 (523) T protein:vir:68 156 IFFHKIIDPKRPKEGIKELRRLDPRQVQYVREVITTTEAGVKIVKGYKEYFIYDTSHESYACDGRIYEAGTKIKIPKAAI 235 (523) T ss_pred EEEEEEeeCCCccccceeeeeeCCcceeEEEeecCCCCcchhhhhhhhhheeeccccccccccccccCCCcceecchhhe Confidence 9998876533 23789999999999764321 1100 00111112221 11 23345566666 Q ss_pred EEeecCC-CCCcccccCHHHHHHHHHHHHHHHHHHHHHHHHccCCcceEEEeCC-CCCHHHHHHHHHHHHHHhcc----c Q lcl|Aclame:pro 175 LHFKNGI-TLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVG-DLNEDAKKVFRENFESMSSG----L 248 (429) Q Consensus 175 ih~~~~~-~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~-~~~~e~~~~~~~~~~~~~~g----~ 248 (429) .|...+- +.+...-+|-|..|.+.+....-++...--+--..+.-.-+.-++. .+.+.-+++..+.+...++- . T Consensus 236 ~y~hSGL~d~~~~~i~gyLhkAiKp~NQLkmlEDAlVIYRitRAPeRRvFYIDvGnlPk~KAeqYl~~im~k~kNKlvYD 315 (523) T protein:vir:68 236 VYAHSGLVDCCGKNIIGYLHRAIKPANQLKLLEDAVVIYRITRAPDRRVWYVDTGNMPSRKAAEHMQHVMNTMKNRIAYD 315 (523) T ss_pred eeeeccceeCCCCceeccchhhhHHHHhhHHHHhhHHHHhhhccccceEEEEecCCCCchhHHHHHHHHHHhhcceeEEe Confidence 5554331 2223344577888888777666555554444444455555555553 34444444444444333321 1 Q ss_pred ccccc------ee-ec----------CCCceeEecCCChhHHHHHHHHHHHHHHHHHHhcCChhhcCCcc-cccc--cc- Q lcl|Aclame:pro 249 QNSHR------IA-LM----------PVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLS-KATL--NN- 307 (429) Q Consensus 249 ~~~~~------~~-vl----------~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~fgvp~~~l~~~~-~~~~--~n- 307 (429) ...|. .+ .+ ..|.+++.|.-. ..+.-++-..+....+.++++||.+-|.... ..+. ++ T Consensus 316 a~TGev~ddrk~msMlEDyWLpRReGgrgTEItTLpGg-qnlgem~DV~YF~kkLy~aLnVP~sRl~~~~~~f~~Gr~~E 394 (523) T protein:vir:68 316 ATTGKIKNQQHIMSMTEDYWLQRRDGKAVTEVDTLPGA-DNTGNMEDVRWFRNALYMALRIPITRIPSDQGGIQFDAGTS 394 (523) T ss_pred ccCCeeccchhhhhhHhhhcccccCCCcccceeecccc-CCcChHHHHHHHHHHHHHHhCCcceeecCCCcceecccccc Confidence 11222 11 12 136777776432 2222335566778999999999999985432 1221 11 Q ss_pred HHH---HHHHHHHHHHhHHHHHHHHHHHHhhccc-----hhhcc---hhhhhhhhhhH----hhh-hHHHHHHHHHHHHh Q lcl|Aclame:pro 308 IEQ---QQQQFYTDTLQATLTMYEQEMTYKLFLD-----SELDK---GFYSKFNVDAI----LRA-DIKTRYEAYRTGIQ 371 (429) Q Consensus 308 ~~~---~~~~~~~~~l~P~~~~i~~~l~~~ll~~-----~~~~~---~~~~~fd~~~l----~~~-d~~~~~~~~~~~~~ 371 (429) +.- ....|+..-=.-+...|.+.|.+.|..+ .++.. .+++.|..|.. ... -+..|...+..+-. T Consensus 395 ItRDEikF~KFI~rLR~rFs~lf~~~Lk~qLilKgiit~eew~~i~~~I~~~f~~Dn~f~ElKe~Eil~~R~~~l~~~dp 474 (523) T protein:vir:68 395 ITRDELSFGKFIRELQHKFEEIFLDPLKTNLILKGIITEDEWNDEINNIKIKFHRDSYFSELKDAEILERRINMLQMAEP 474 (523) T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCHHHHHHHhhcceEeeeecchHHHHHHHHHHHHHHHHHHHhhh Confidence 111 1122222222223334444444443322 22211 12333322221 111 12233333333311 Q ss_pred --CCCCCHHHHHH-HhCCCCCC--CcceeeeccccccccccccccCCCCCCCCCCCCCCCCCC Q lcl|Aclame:pro 372 --GGFLKPNEARS-KEDLPPEA--GGDRLLVNGNMLPIDMAGQAYLKGGDTNGEVSKEGNEGN 429 (429) Q Consensus 372 --~g~~t~NE~R~-~~Gl~~~~--~gD~~~~~~n~~~~~~~~~~~~~~g~~~~~~~~~~~~~n 429 (429) +..++.+=+|+ .|.+...+ ..++....-- . .+-...+ + ..+++ T Consensus 475 yvGky~s~~yi~k~ILr~tDeei~~~~kqI~~E~----k-~~~~~~p----~------~e~~~ 522 (523) T protein:vir:68 475 FIGKYISHRTAMKDILQMSDEEIEQEAKQIEEES----K-EARFQDP----D------QEQED 522 (523) T ss_pred hhcccchhHHHHHHHhccCHHHHHHHHHHHHHHh----h-cCCCCCC----c------hhhhc Confidence 22345555554 34443221 1111000000 0 0000000 0 00000 No 242 >protein:vir:7208 Length: 524 # NCBI annotation: gp20 portal vertex protein of head # Family: family:all:1036 # MgeID: mge:142 # MgeName: T4 # Cross-refs: genbank:acc:NP_049782;genbank:gi:9632594;genbank:GeneID:1258582 Probab=64.59 E-value=0.3 Score=23.47 Aligned_cols=407 Identities=8% Similarity=0.071 Sum_probs=167.3 Q ss_pred Cch--hhhhhcccccc-----------c--ccccccCCch-H---------------HHHHhhcCCCCccee------ch Q lcl|Aclame:pro 1 MDS--VKKFFNFEKRQ-----------T--SQVIELNKDD-E---------------KLLEWLGISPSTISV------KG 43 (429) Q Consensus 1 Mg~--~~~~~~~~~~~-----------~--~~~~~~~~~~-~---------------~~~~~~~~~~~~~~~------~~ 43 (429) |.+ |. ||++..+- + +.+.+...++ . ...+++|...+...- .. T Consensus 1 m~~~~L~-~~~~w~~~de~~~~~~~~~~~~S~~~p~~~Dga~e~~~~~~~~a~~~~g~~~~~~g~~e~~~~~~~eLI~~Y 79 (524) T protein:vir:72 1 MKFNVLS-LFAPWAKMDERNFKDQEKEDLVSITAPKLDDGAREFEVSSNEAASPYNAAFQTIFGSYEPGMKTTRELIDTY 79 (524) T ss_pred CCCchhh-HhhccccCcchhhhhhhccCCccccCccCCCCceeeeecccccccccceeeeehhcccccccchHHHHHHHH Confidence 777 33 33332210 1 1111111110 0 000111111110100 12 Q ss_pred hhhhccHHHHHHHHHHHHhhccC-----ceEEEecCCc---eeeeeecchhhhhhcccCcCCCCHHHHHHHHHHHHHhhC Q lcl|Aclame:pro 44 KNALKVATVFACIKILSESVSKL-----PLKIYQEDEY---GIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYG 115 (429) Q Consensus 44 ~~a~~~~~v~~~i~~ia~~ia~~-----~~~~~~~~~~---~~~~~~~~~~~~~l~~~PN~~~s~~~~~~~~~~~~l~~G 115 (429) +..+.+|.|-.||+.|.+.+.-+ |+.+.-.+-+ ..+......+.++|+. ++...--..+++.|.+.| T Consensus 80 R~ma~~pEvd~Av~eIVneaiv~d~~~~pV~l~L~~~~~s~~iK~kI~eeF~~Il~l-----l~F~~~~~~~fR~WYVDg 154 (524) T protein:vir:72 80 RNLMNNYEVDNAVSEIVSDAIVYEDDTEVVALNLDKSKFSPKIKNMMLDEFSDVLNH-----LSFQRKGSDHFRRWYVDS 154 (524) T ss_pred HHHhhccchhhHHHHhhcceeEecCCCceEEEEecCcCcchHHHHHHHHHHHHHHHH-----hccchhhhHHHhhheeee Confidence 44567899999999999875422 2222211110 0001111223334431 222223335566778889 Q ss_pred CeEEEEeeCCC---CceEEEEeeCCcceEEEEcC-----Ccce-eeeeeEEEeec-------cc------CceEEEccce Q lcl|Aclame:pro 116 NSYANIEFDRK---GKVQALWPIDASKVTVYIDD-----VGLL-NSKTKMWYVVN-------TG------GQQRVLKPEE 173 (429) Q Consensus 116 ~~~~~~~~~~~---g~~~~l~~l~p~~v~~~~~~-----~~~~-~~~~~~~~~~~-------~~------g~~~~~~~~e 173 (429) ..|..++.+.. .-..+|..|+|..|+.++.- .+.. ......+|.|. .+ +....++.+- T Consensus 155 Ri~fhKiid~k~pk~GI~Elr~lDPr~i~~vr~i~~~~~~~~~vi~~~~e~f~Y~~~~~~y~~~g~~~~~~~~ikI~~dA 234 (524) T protein:vir:72 155 RIFFHKIIDPKRPKEGIKELRRLDPRQVQYVREIITETEAGTKIVKGYKEYFIYDTAHESYACDGRMYEAGTKIKIPKAA 234 (524) T ss_pred EEEEEEEEeCCCccccceeeeeeCCccceeeeeeccCCCccchhhcchhhheeeccCccccccCccccCCCcceecchhh Confidence 99998876533 23789999999999764321 1110 00111122222 11 2334455666 Q ss_pred EEEeecCC-CCCcccccCHHHHHHHHHHHHHHHHHHHHHHHHccCCcceEEEeCC-CCCHHHHHHHHHHHHHHhcc---- Q lcl|Aclame:pro 174 ILHFKNGI-TLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVG-DLNEDAKKVFRENFESMSSG---- 247 (429) Q Consensus 174 vih~~~~~-~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~-~~~~e~~~~~~~~~~~~~~g---- 247 (429) |.|...+- +.+...-+|-|..|.+.+....-++...--+--..+.-.-+.-++. .+.+.-+++..+.+...|+- T Consensus 235 I~y~hSGL~d~~~~~i~gyLhkAiKp~NQLkmlEDAlVIYRitRAPeRRvFYIDvGnlPk~KAeqYl~~im~k~KNklvY 314 (524) T protein:vir:72 235 VVYAHSGLVDCCGKNIIGYLHRAVKPANQLKLLEDAVVIYRITRAPDRRVWYVDTGNMPARKAAEHMQHVMNTMKNRVVY 314 (524) T ss_pred eeeeeccceeCCCCceeccchhhhHhHHhhhHHHhhHHHHhhhccccceEEEEecCCCCchhHHHHHHHHHHhcCceeEE Confidence 55554321 2223344577888887777666555554444444455555555553 34444444444444443321 Q ss_pred cccccce-------eec----------CCCceeEecCCChhHHHHHHHHHHHHHHHHHHhcCChhhcCCccc--cccccH Q lcl|Aclame:pro 248 LQNSHRI-------ALM----------PVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSK--ATLNNI 308 (429) Q Consensus 248 ~~~~~~~-------~vl----------~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~fgvp~~~l~~~~~--~~~~n~ 308 (429) ..+.|.+ ..+ ..|.+++.|.-. +.+.-++-..+....+.++++||.+-|..... .+.... T Consensus 315 Da~TGev~ddrk~msMlEDyWLpRReGgrgTEItTLpGg-qnlgem~DV~YF~kkLy~aLnVP~sRl~~d~~~~f~~gr~ 393 (524) T protein:vir:72 315 DASTGKIKNQQHNMSMTEDYWLQRRDGKAVTEVDTLPGA-DNTGNMEDIRWFRQALYMALRVPLSRIPQDQQGGVMFDSG 393 (524) T ss_pred eCCCCeeccchhhhhhHhhhcccccCCCcccceeecccc-CCcChHHHHHHHHHHHHHHhCCchhhcCCCCCcccccccc Confidence 1122221 111 136777776432 22223355667789999999999999843221 221111 Q ss_pred HHH------HHHHHHHHHhHHHHHHHHHHHHhhccc-----hhhcc---hhhhhhhhhhH----hhh-hHHHHHHHHHHH Q lcl|Aclame:pro 309 EQQ------QQQFYTDTLQATLTMYEQEMTYKLFLD-----SELDK---GFYSKFNVDAI----LRA-DIKTRYEAYRTG 369 (429) Q Consensus 309 ~~~------~~~~~~~~l~P~~~~i~~~l~~~ll~~-----~~~~~---~~~~~fd~~~l----~~~-d~~~~~~~~~~~ 369 (429) .+- ...|+..-=.-+...|.+.|.+.|..+ .++.. .+++.|..|.. ... -+..|...+..+ T Consensus 394 ~EItRDEikF~KFI~rLR~rFs~~f~~~Lk~qLilKgiit~eew~~i~~~I~~~f~~Dn~f~ElKe~Eil~~R~~~l~~~ 473 (524) T protein:vir:72 394 TSITRDELTFAKFIRELQHKFEEVFLDPLKTNLLLKGIITEDEWNDEINNIKIEFHRDSYFAELKEAEILERRINMLTMA 473 (524) T ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCHHHHHHHhhcceEEeeecchHHHHHHHHHHHHHHHHHHHh Confidence 111 122222222223334444444443322 22211 12333332221 111 122333333333 Q ss_pred Hh--CCCCCHHHHHH-HhCCCCCC--CcceeeeccccccccccccccCCCCCCCCCCCCCCCCCC Q lcl|Aclame:pro 370 IQ--GGFLKPNEARS-KEDLPPEA--GGDRLLVNGNMLPIDMAGQAYLKGGDTNGEVSKEGNEGN 429 (429) Q Consensus 370 ~~--~g~~t~NE~R~-~~Gl~~~~--~gD~~~~~~n~~~~~~~~~~~~~~g~~~~~~~~~~~~~n 429 (429) -. +..++.+=+|+ .|.+...+ ..++....-- . .+-...+ + ..+++ T Consensus 474 dpyvGky~s~~yi~k~ILr~tDeei~~~~k~I~~E~----k-~~~~~~~----~------~~~~~ 523 (524) T protein:vir:72 474 EPFIGKYISHRTAMKDILQMTDEEIEQEAKQIEEES----K-EARFQDP----D------QEQED 523 (524) T ss_pred hhhhcccchhHHHHHHHhccCHHHHHHHHHHHHHHh----h-cCCCCCC----c------hhhhc Confidence 11 22335555554 34443221 1111000000 0 0000000 0 00000 No 243 >protein:vir:94956 Length: 452 # NCBI annotation: putative phage structural protein # Family: family:all:584 # MgeID: mge:1538 # MgeName: Xp15 # Cross-refs: genbank:acc:YP_239276;genbank:gi:66392058;genbank:GeneID:5076601 Probab=63.41 E-value=0.32 Score=23.31 Aligned_cols=379 Identities=10% Similarity=-0.010 Sum_probs=160.6 Q ss_pred CchhhhhhcccccccccccccCCchHHHHHhhcCCCC-------cce---e-c---hhh----hhccHHHHHHHHHHHHh Q lcl|Aclame:pro 1 MDSVKKFFNFEKRQTSQVIELNKDDEKLLEWLGISPS-------TIS---V-K---GKN----ALKVATVFACIKILSES 62 (429) Q Consensus 1 Mg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~---~-~---~~~----a~~~~~v~~~i~~ia~~ 62 (429) |.+=.+ ..........+..+-+..+++.. +.+ - + .+. |.-.+++...++.++.. T Consensus 1 m~V~~~--------hp~y~a~~~~W~~~rd~~~G~~~~r~~g~~YLpk~~~E~~~~Y~~rl~rA~~~n~~~~t~~~~~G~ 72 (452) T protein:vir:94 1 MPIETK--------HPEYLAYENDWIDCRVASLGQREVKKKGVRFLPKLSGQTDDMYNAYKQRALFYSITSKTLSALSGM 72 (452) T ss_pred CCCCCc--------CHHHHHHHHHHHHHHHHhcChHHHHcCCcccCCCCCCCCHHHHHHHHhhccCCchHHHHHHHHhch Confidence 553110 00000000111111111111100 000 0 0 111 12245666777777766 Q ss_pred hccCceEEEecCCceeeeeecchhhhhhcccCcCCCCHHHHHHHHHHHHHhhCCeEEEEeeCCCCceEEEEeeCCcceEE Q lcl|Aclame:pro 63 VSKLPLKIYQEDEYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTV 142 (429) Q Consensus 63 ia~~~~~~~~~~~~~~~~~~~~~~~~~l~~~PN~~~s~~~~~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~l~p~~v~~ 142 (429) +-+-|..+.. ...+.++ +. -....+-.+|.+.++...+.+|-+++++.....|.-.-+..++|..|-= T Consensus 73 vf~k~p~~~~----------p~~l~~~-~~-D~~G~~L~~~~~~~~~~~l~~G~~~ilVD~p~~g~rPy~~~~~~~~Ii~ 140 (452) T protein:vir:94 73 VLDQPPVITH----------PDAMSKY-FE-DQSGIQFYEVFTRAVEETLLMGRVGVFIDRPLTGGDPYISVYTTENILN 140 (452) T ss_pred hhcCCceecc----------cHHHHHH-Hh-cccCCCHHHHHHHHHHHHHhcCeEEEEEeeccCCCceEEEEechhhhcC Confidence 6665554421 1223333 22 2567888999999999999999999999887766533444444433310 Q ss_pred -------------------EEcC-CcceeeeeeEEE-------------eecccCceEEE----c--c----ceEEEee- Q lcl|Aclame:pro 143 -------------------YIDD-VGLLNSKTKMWY-------------VVNTGGQQRVL----K--P----EEILHFK- 178 (429) Q Consensus 143 -------------------~~~~-~~~~~~~~~~~~-------------~~~~~g~~~~~----~--~----~evih~~- 178 (429) ..++ +.........|+ +...++..... . . -..|-|- T Consensus 141 W~~~~~g~l~~v~lre~~~~~d~~d~f~~~~~~~yRvL~l~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~IP~v~ 220 (452) T protein:vir:94 141 WEEDEDGRLLMVVLREFYTVRDTADRYVQNIRVRYRCLELVDGLLQITVHETQDGKVWELAKTSTIQNVGVTMDYIPFFC 220 (452) T ss_pred ccccccCCeeEEEEEEEEEEecCCCcccceeEEEEEEEEEeCCeEEEEEEEccCCceeeeccceeecCCCcccceeEEEE Confidence 1111 100000000111 01111111100 0 0 0111111 Q ss_pred -cCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHHccCCcceEEEeCCCCCHHHHHHHHHHHHHHhcccccccceeec Q lcl|Aclame:pro 179 -NGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGDLNEDAKKVFRENFESMSSGLQNSHRIALM 257 (429) Q Consensus 179 -~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~g~~~~~~~~vl 257 (429) .....+...|.+|+..++..-........-....+...+.|..++.--.+.. ...-|+ +.++.+ T Consensus 221 ~~~~~~~~~~~~pPLl~LA~ln~~hy~~~sd~~~~l~~~~~P~l~~~g~~~~~------------~i~iG~---~~~~~l 285 (452) T protein:vir:94 221 ITPSGLSMTPAKPPMIDIVDINYSHYRTSADLEHGRHFTGLPTPWITGAESQS------------TMHIGS---TKAWVI 285 (452) T ss_pred EcCCCCCCCCCccchHHHHHHHHHHhcchhHHHHHHHHcccceeEeecCcCCC------------ceEecc---cccccC Confidence 1222344568888887766544444444445556666778877766332211 112233 345777 Q ss_pred CC-Cc--eeEecCCChhHHHHHHHHHHHHHHHHHHhcCChhhcCCcccccccc-HHHHHHHHHHHHHhHHHHHHHHHHHH Q lcl|Aclame:pro 258 PV-GY--QFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKATLNN-IEQQQQQFYTDTLQATLTMYEQEMTY 333 (429) Q Consensus 258 ~~-g~--~~~~~~~~~~d~~~~e~~~~~~~~Ia~~fgvp~~~l~~~~~~~~~n-~~~~~~~~~~~~l~P~~~~i~~~l~~ 333 (429) ++ |. .|.+.+-+..... .+.++....++ ...| ..++-.....+-+. ......+-..+.|.-++..+++.+++ T Consensus 286 pe~~~~~~yie~~g~~i~~~-~~~l~~le~~m-~~~G--a~ll~~~~~~~~s~ea~~~~~~~~~s~L~~~a~~~e~al~~ 361 (452) T protein:vir:94 286 PEVAAKVGFLEFTGQGLQSL-EKALSEKQAQL-ASLS--ARLIDNSTRGSEATETVKLRYMSETASLKSVTRAVEALLNK 361 (452) T ss_pred CCCCCcceEEccCchhHHHH-HHHHHHHHHHH-HHHH--HHhhccCCCcchHHHHHHHHHHHhhHHHHHHHHHHHHHHHH Confidence 74 64 5555555544422 23333333332 2222 12222211111111 11222333357777788888888766 Q ss_pred hhccchh---hcchhhhhhhhhhHhhhhHHHHHHHHHHHHhCCCCCHHHHHHHh---CCCCCCCcceeeecccccccccc Q lcl|Aclame:pro 334 KLFLDSE---LDKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKE---DLPPEAGGDRLLVNGNMLPIDMA 407 (429) Q Consensus 334 ~ll~~~~---~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~---Gl~~~~~gD~~~~~~n~~~~~~~ 407 (429) .|=.-.. ...+..|..+.+-+.........+++.+++.+|.++....++.+ |....+. +.. ..-.+ . T Consensus 362 ~l~~~a~w~g~~~~~~v~~n~dF~~~~~~~~~~~al~~~~~~G~is~~t~~~~L~~~gvl~~~~--e~~----~i~~E-~ 434 (452) T protein:vir:94 362 AYSCIMDMESMGGTLNIKLNSAFLDSKLTAAELKAWVEAYLSGGISKEIYIHALKVGKVLPPPG--ESM----GVIPD-P 434 (452) T ss_pred HHHHHHHHcCCCCceEEEeccccccccCCHHHHHHHHHHHhcCCCcHHHHHHHHHhCCCCCCcc--CHH----HHHHH-h Confidence 5411110 11122333333323333334455666778999999999988877 5433221 110 00000 0 Q ss_pred ccccCCCCCCCCCCCCCCCCC Q lcl|Aclame:pro 408 GQAYLKGGDTNGEVSKEGNEG 428 (429) Q Consensus 408 ~~~~~~~g~~~~~~~~~~~~~ 428 (429) ..+.+. .-+++++.+++- T Consensus 435 ~~~~~~---~~~~~~~~~~~~ 452 (452) T protein:vir:94 435 PAPEPS---PSNTPPNPSSKA 452 (452) T ss_pred hccCcc---cCCCCCCCccCC Confidence 000010 011112222222 No 244 >protein:vir:103458 Length: 524 # NCBI annotation: portal vertex of the head # Family: family:all:1036 # MgeID: mge:1542 # MgeName: RB32 # Cross-refs: genbank:acc:YP_803110;genbank:gi:116326390;genbank:GeneID:4405487 Probab=62.77 E-value=0.33 Score=23.23 Aligned_cols=407 Identities=9% Similarity=0.074 Sum_probs=167.2 Q ss_pred Cch--hhhhhcccccc-----------c--ccccccCCch-H---------------HHHHhhcCCCCccee------ch Q lcl|Aclame:pro 1 MDS--VKKFFNFEKRQ-----------T--SQVIELNKDD-E---------------KLLEWLGISPSTISV------KG 43 (429) Q Consensus 1 Mg~--~~~~~~~~~~~-----------~--~~~~~~~~~~-~---------------~~~~~~~~~~~~~~~------~~ 43 (429) |.+ |. ||++..+- + +.+.+...++ . ...+++|...+...- .. T Consensus 1 m~~~~L~-~~~~w~~~de~~~~~~~~~~~~S~~~p~~~Dga~e~~~~~~~~a~~~~g~~~~~~g~~e~~~~~~~eLI~~Y 79 (524) T protein:vir:10 1 MKFNVLS-LFAPWAKMDERNFKDQEKEDLVSITAPKLDDGAREFEVSSNEAASPYNAAFQTIFGSYEPGMKTTRELIDTY 79 (524) T ss_pred CCCchhh-HhhccccCcchhhhhhhccCCccccCccCCCCceeeeecccccccccceeeeehhcccccccchHHHHHHHH Confidence 777 33 33332210 1 1111111110 0 000111111110100 12 Q ss_pred hhhhccHHHHHHHHHHHHhhccC-----ceEEEecCCc---eeeeeecchhhhhhcccCcCCCCHHHHHHHHHHHHHhhC Q lcl|Aclame:pro 44 KNALKVATVFACIKILSESVSKL-----PLKIYQEDEY---GIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYG 115 (429) Q Consensus 44 ~~a~~~~~v~~~i~~ia~~ia~~-----~~~~~~~~~~---~~~~~~~~~~~~~l~~~PN~~~s~~~~~~~~~~~~l~~G 115 (429) +..+.+|.|-.||+.|.+.+.-+ |+.+.-.+-+ ..+......+.++|+. ++...--..+++.|.+.| T Consensus 80 R~ma~~pEvd~Av~eIVneaiv~d~~~~pV~l~L~~~~~s~~iK~kI~eeF~~Il~l-----l~F~~~~~~~fR~WYVDg 154 (524) T protein:vir:10 80 RNLMNNYEVDNAVSEIVSDAIVYEDDTEVVALNLDKSKFSPKIKNMMLDEFNDVLNH-----LSFQRKGSDHFRRWYVDS 154 (524) T ss_pred HHHhhccchhhHHHHhhcceeEecCCCceEEEEecCcCcchHHHHHHHHHHHHHHHH-----hccchhhhHHHhhheeee Confidence 44567899999999999875422 2222211110 0001111223334431 222223345566778889 Q ss_pred CeEEEEeeCCC---CceEEEEeeCCcceEEEEcC-----Ccce-eeeeeEEEeec-------cc------CceEEEccce Q lcl|Aclame:pro 116 NSYANIEFDRK---GKVQALWPIDASKVTVYIDD-----VGLL-NSKTKMWYVVN-------TG------GQQRVLKPEE 173 (429) Q Consensus 116 ~~~~~~~~~~~---g~~~~l~~l~p~~v~~~~~~-----~~~~-~~~~~~~~~~~-------~~------g~~~~~~~~e 173 (429) ..|..++.+.. .-..+|..|+|..|+.++.- .+.. ......+|.|. .+ +....++.+- T Consensus 155 Ri~fhKiid~k~pk~GI~Elr~lDPr~i~~vr~i~~~~~~~~~vi~~~~e~f~Y~~~~~~y~~~g~~~~~~~~ikI~~dA 234 (524) T protein:vir:10 155 RIFFHKIIDPKRPKEGIKELRRLDPRQVQYVREIITETEAGTKIVKGYKEYFIYDTAHESYACDGRMYEAGTKIKIPKAA 234 (524) T ss_pred EEEEEEEeeCCCccccceeeeeeCCccceeeeeeccCCCccchhhcchhhheeeccCccccccCccccCCCcceecchhh Confidence 99998876533 23789999999999764321 1110 00111122222 11 2334455655 Q ss_pred EEEeecCC-CCCcccccCHHHHHHHHHHHHHHHHHHHHHHHHccCCcceEEEeCC-CCCHHHHHHHHHHHHHHhcc---- Q lcl|Aclame:pro 174 ILHFKNGI-TLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVG-DLNEDAKKVFRENFESMSSG---- 247 (429) Q Consensus 174 vih~~~~~-~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~-~~~~e~~~~~~~~~~~~~~g---- 247 (429) |.|...+- +.+...-+|-|..|.+.+....-++...--+--..+.-.-+.-++. .+.+.-+++..+.+...|+- T Consensus 235 I~y~hSGL~d~~~~~i~gyLhkAiKp~NQLkmlEDAlVIYRitRAPeRRvFYIDvGnlPk~KAeqYl~~im~k~KNklvY 314 (524) T protein:vir:10 235 IVYAHSGLVDCCGKNIIGYLHRAVKPANQLKLLEDAVVIYRITRAPDRRVWYVDTGNMPARKAAEHMQHVMNTMKNRVVY 314 (524) T ss_pred eeeeeccceeCCCCceeccchhhhHHHHhhhHHHhhHHHHhhhccccceEEEEecCCCCchhHHHHHHHHHHhcCceeEE Confidence 55554321 2223344577888887777666555554444444455555555553 34444444444444443321 Q ss_pred cccccce-------eec----------CCCceeEecCCChhHHHHHHHHHHHHHHHHHHhcCChhhcCCccc--cccccH Q lcl|Aclame:pro 248 LQNSHRI-------ALM----------PVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSK--ATLNNI 308 (429) Q Consensus 248 ~~~~~~~-------~vl----------~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~fgvp~~~l~~~~~--~~~~n~ 308 (429) ..+.|.+ ..+ ..|.+++.|.-. +.+.-++-..+..+.+.++++||.+-|..... .+.... T Consensus 315 Da~TGev~ddrk~msMlEDyWLpRReGgrgTEItTLpGg-qnlgem~DV~YF~kkLy~aLnVP~sRl~~d~~~~f~~gr~ 393 (524) T protein:vir:10 315 DASTGKIKNQQHNMSMTEDYWLQRRDGKAVTEVDTLPGA-DNTGNMEDVRWFRQALYMALRVPLSRIPQDQQGGVMFDSG 393 (524) T ss_pred eCCCCeeccchhhhhhHhhhcccccCCCcccceeecccc-CCcChHHHHHHHHHHHHHHhCCchhhcCCCCCcccccccc Confidence 1122221 111 136777776432 22223355667789999999999999843221 221111 Q ss_pred HHH------HHHHHHHHHhHHHHHHHHHHHHhhccc-----hhhcc---hhhhhhhhhhH----hhh-hHHHHHHHHHHH Q lcl|Aclame:pro 309 EQQ------QQQFYTDTLQATLTMYEQEMTYKLFLD-----SELDK---GFYSKFNVDAI----LRA-DIKTRYEAYRTG 369 (429) Q Consensus 309 ~~~------~~~~~~~~l~P~~~~i~~~l~~~ll~~-----~~~~~---~~~~~fd~~~l----~~~-d~~~~~~~~~~~ 369 (429) .+- ...|+..-=.-+...|.+.|.+.|..+ .++.. .+++.|..|.. ... -+..|...+..+ T Consensus 394 ~EItRDEikF~KFI~rLR~rFs~~f~~~Lk~qLilKgiit~eew~~i~~~I~~~f~~Dn~f~ElKe~Eil~~R~~~l~~~ 473 (524) T protein:vir:10 394 TSITRDELTFAKFIRELQHKFEEVFLDPLKTNLLLKGIITEDEWNDEINNIKIEFHRDSYFTELKEAEILERRINMLTMA 473 (524) T ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCHHHHHHHhhcceEEeeecchHHHHHHHHHHHHHHHHHHHh Confidence 111 122222222223334444444443322 22211 12333332221 111 122333333333 Q ss_pred Hh--CCCCCHHHHHH-HhCCCCCC--CcceeeeccccccccccccccCCCCCCCCCCCCCCCCCC Q lcl|Aclame:pro 370 IQ--GGFLKPNEARS-KEDLPPEA--GGDRLLVNGNMLPIDMAGQAYLKGGDTNGEVSKEGNEGN 429 (429) Q Consensus 370 ~~--~g~~t~NE~R~-~~Gl~~~~--~gD~~~~~~n~~~~~~~~~~~~~~g~~~~~~~~~~~~~n 429 (429) -. +..++.+=+|+ .|.+...+ ..++....-- . .+-...+ + ..+++ T Consensus 474 dpyvGky~s~~yi~k~ILr~tDeei~~~~k~I~~E~----k-~~~~~~~----~------~~~~~ 523 (524) T protein:vir:10 474 EPFIGKYISHRTAMKDILQMTDEEIEQEAKQIEEES----K-EARFQDP----D------QEQED 523 (524) T ss_pred hhhhcccchhHHHHHHHhccCHHHHHHHHHHHHHHh----h-cCCCCCC----c------hhhhc Confidence 11 22335555554 34443221 1111000000 0 0000000 0 00000 No 245 >protein:vir:96783 Length: 488 # NCBI annotation: putative structural protein # Family: family:all:584 # MgeID: mge:1629 # MgeName: phiHSIC # Cross-refs: genbank:acc:YP_224240;genbank:gi:62362375;genbank:GeneID:3345722 Probab=43.48 E-value=0.84 Score=20.99 Aligned_cols=375 Identities=10% Similarity=-0.059 Sum_probs=153.2 Q ss_pred CchhhhhhcccccccccccccCCchHHHHHhhc-----CC----CC------cce----ec--h-----hhhhccHHHHH Q lcl|Aclame:pro 1 MDSVKKFFNFEKRQTSQVIELNKDDEKLLEWLG-----IS----PS------TIS----VK--G-----KNALKVATVFA 54 (429) Q Consensus 1 Mg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~----~~------~~~----~~--~-----~~a~~~~~v~~ 54 (429) |.+=.+---..+.............. -....| .. .. +.. .+ . +.|.-.++... T Consensus 14 m~V~~~hp~y~a~~~~W~~~~d~g~~-~~k~~g~~YLPk~~~~~~~~~~d~~y~~~~~~~~~~y~~~~~~rA~~~n~~~~ 92 (488) T protein:vir:96 14 MLTPIYHPDYLVNAPQWLRNLDCVMD-NIKRKKQTYLPNLGAIPPEAKTDPKVTALAAKIEKDWEDLTWRLANYVNIVNP 92 (488) T ss_pred ecccccCHHHHHHhhhhhHhhhhhhH-HHHHhhhhcCCCCCCccccccCcchhhhhhccchhhhHhhhhhccccCchhHH Confidence 33100000000000000000000000 000000 00 00 000 00 0 11222355666 Q ss_pred HHHHHHHhhccCceEEEecCCceeeeeecchhhhhhcccCcCCCCHHHHHHHHHHHHHhhCCeEEEEeeCCCCc------ Q lcl|Aclame:pro 55 CIKILSESVSKLPLKIYQEDEYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGK------ 128 (429) Q Consensus 55 ~i~~ia~~ia~~~~~~~~~~~~~~~~~~~~~~~~~l~~~PN~~~s~~~~~~~~~~~~l~~G~~~~~~~~~~~g~------ 128 (429) +++.++..+.+-+..+...+. ..+..++...--...+-.+|.+.++...+.+|-+++++.....+. T Consensus 93 tl~~l~G~vfrk~p~~~~~~~--------~~l~~l~~d~D~~G~~L~~f~~~~~~~~l~~G~~~ilVD~P~~~~T~ade~ 164 (488) T protein:vir:96 93 TMNAITGAVMRREPEFDTMDN--------PVLIGLRDNIDGKGNGIDQECKQALNALQWGSRCGWLVRSHPESATMADWN 164 (488) T ss_pred HHHHhcchhhccCceeccCCc--------HHHHHHHhccCCCCCCHHHHHHHHHHHHHhcCeEEEEEecCCCcCCHHHHH Confidence 666666666555555421110 125555655566677889999999999999999999987764321 Q ss_pred ----eEEEEeeCCcce-----------------E-----EEEcCCcceeeeeeEEEeecccCc--eEE----------Ec Q lcl|Aclame:pro 129 ----VQALWPIDASKV-----------------T-----VYIDDVGLLNSKTKMWYVVNTGGQ--QRV----------LK 170 (429) Q Consensus 129 ----~~~l~~l~p~~v-----------------~-----~~~~~~~~~~~~~~~~~~~~~~g~--~~~----------~~ 170 (429) ..-+..+.|..| . ...++... .......+....+|. .+. .+ T Consensus 165 ~~~~rPy~~~~~a~~IinW~~~~v~G~~~L~~v~lrE~~~~~D~~~~-~~~~~~~~~~l~~g~~~v~~~~~~~~~~e~~~ 243 (488) T protein:vir:96 165 KGKKLPTAAFYDALHIIDWEVEYIDGEEKLTYLSLLEDYQERDGGTY-VSKQRLINHRLVDGLCEFQEVTDDEYSDEWTP 243 (488) T ss_pred HhcCCcEEEEechhhhcCcceeccCCceeeEEEEEEEEEEeccCCCc-ccceEEEEEEEECcEEEEEEEecCCcccceEe Confidence 112332222221 0 01111100 000011010011111 000 01 Q ss_pred ---------cceEEEeecCCCCCcccccCHHHHHHHH-HHHHHHHHHHHHHHHHccCCcceEEEeCCCCCHHHHHHHHHH Q lcl|Aclame:pro 171 ---------PEEILHFKNGITLDGLVGVPTMEYLKST-LENSASADKFINNFYKQGLQVKGLVQYVGDLNEDAKKVFREN 240 (429) Q Consensus 171 ---------~~evih~~~~~~~~~~~G~s~~~~~~~~-i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~~e~~~~~~~~ 240 (429) .=.++++- ....+...+.+|+..++.. +........+ ...+...+.|..+.... +.+++..+.... T Consensus 244 ~~~g~~~l~~IP~v~~~-~~~~~~~~~~pPLldLA~lnl~Hy~~ssd~-~~il~~~~~p~lv~~~~-~~~~~~~~~~~~- 319 (488) T protein:vir:96 244 VLINSKQSDTIPFFLAS-SQSNEWCIDSTPLTSLAEISLSIYVMNAYS-NKAMILANEAKWMVDMG-DMNKTMASEMNP- 319 (488) T ss_pred ecCCCcccCeeEEEEEe-cCCCCCCCCCCchHHHHHHHHHHHhhhhHH-HHHHHhcCCceeeeccC-CCCccccccccc- Confidence 01123332 2223345677777665544 4444444444 44445666776665432 344444433221 Q ss_pred HHHHhccccccc-ceeecCCC-ceeEecCCChhHHHHHHHHHHHHHHHHHHhcCChhhcCCccccccccHHHHHHHHHHH Q lcl|Aclame:pro 241 FESMSSGLQNSH-RIALMPVG-YQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKATLNNIEQQQQQFYTD 318 (429) Q Consensus 241 ~~~~~~g~~~~~-~~~vl~~g-~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~fgvp~~~l~~~~~~~~~n~~~~~~~~~~~ 318 (429) .|..-.+ -+...+.| ++|.+.+ ++.+ ..+.++....+++. .| ..++.- ..+..+.........-.+ T Consensus 320 -----~g~~~~~~~~~~~~~g~~~~~e~~--~~~l-~~~~l~~l~~qm~~-~G--a~l~~~-~~~~Ta~~~~~~~~~~~S 387 (488) T protein:vir:96 320 -----LGFTLAGRMPYYVKNGDVKVIQAQ--FSPE-TENKVEKLFEQAVK-VG--ASLFTQ-QSNETATGAAIRSGSSTA 387 (488) T ss_pred -----ceeeecccccccccCCceeecCCc--hhHH-HHHHHHHHHHHHHH-Hh--HhhccC-CCcchHHHHHHHHHHhhH Confidence 1211111 12333444 4555544 3332 12333333333322 22 122221 111223333344455577 Q ss_pred HHhHHHHHHHHHHHHhhccchhhc---------chhhhhhhhhhHhhhhHHHHHHHHHHHHhCCCCCHHHHHHHhCCCCC Q lcl|Aclame:pro 319 TLQATLTMYEQEMTYKLFLDSELD---------KGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPE 389 (429) Q Consensus 319 ~l~P~~~~i~~~l~~~ll~~~~~~---------~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~Gl~~~ 389 (429) .|.-++..+++.+++.|-.-..+. ....+..+.+-....-.....+++.+++.+|.|+..+.++.+-.-.+ T Consensus 388 ~L~~~a~~le~al~~~l~~~A~w~g~~~~~~~~~~~~~~in~dF~~~~ld~~~~~al~~~~~~G~Is~~t~~~~L~~~gv 467 (488) T protein:vir:96 388 SMATLGNNVEDTVRNMLRFIMRYFEGTNLYVNPDELVFKLNRDYFDVEVNPQMLQVAYAAMMEGNLPQVSWFELLKRARV 467 (488) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCCCCcCccceEEEeccCCCCccCCHHHHHHHHHHHhcCCCCHHHHHHHHHhCCc Confidence 788889999999887653222211 11233333332222223445677788889999998888776533211 Q ss_pred -----CCccee---e-ecccc Q lcl|Aclame:pro 390 -----AGGDRL---L-VNGNM 401 (429) Q Consensus 390 -----~~gD~~---~-~~~n~ 401 (429) ++-++. - -..|+ T Consensus 468 l~~d~~~e~~~~~ie~~g~~~ 488 (488) T protein:vir:96 468 VRGDMSKEEFDEHIAELGFGM 488 (488) T ss_pred CCccCCHHHHHHHHhhcCCCC Confidence 111110 0 00111 No 246 >protein:vir:7430 Length: 563 # NCBI annotation: gp7 # Family: family:all:6920 # MgeID: mge:147 # MgeName: Barnyard # Cross-refs: genbank:acc:NP_818545;genbank:gi:29566982;genbank:GeneID:1260216 Probab=38.81 E-value=1 Score=20.47 Aligned_cols=411 Identities=11% Similarity=0.048 Sum_probs=188.8 Q ss_pred Cchhhhhhccccc---ccccccccCC-chHH------HHHhh-cCCCCccee-chhh--hhccHHHHHHHHHHHHhhccC Q lcl|Aclame:pro 1 MDSVKKFFNFEKR---QTSQVIELNK-DDEK------LLEWL-GISPSTISV-KGKN--ALKVATVFACIKILSESVSKL 66 (429) Q Consensus 1 Mg~~~~~~~~~~~---~~~~~~~~~~-~~~~------~~~~~-~~~~~~~~~-~~~~--a~~~~~v~~~i~~ia~~ia~~ 66 (429) |+-=.+=...-++ ...... +.. +-.. +.++- |.+.....+ -.+. -+..|.-...|+.+++-+ .- T Consensus 1 m~~~~~q~~p~~~~fp~~~a~w-V~~~D~~RlaaY~ly~d~y~n~~~el~~il~G~dr~~~~~ps~r~~V~~~~~~L-g~ 78 (563) T protein:vir:74 1 MPYNHKQYDPAKPFLRGGDDNI-VDENDKNRVRAYDLYENIYLNSAETLKLVLRGDDSVPILMPSGRKIVEAVHRFL-GV 78 (563) T ss_pred CCccccccCCCccccccccccc-CCHHHHHHHHHHHHHHHhhcCchhhhhhhcCCCceeeeccchHHHHHHHHHHhc-CC Confidence 5542211110000 000000 000 0011 11111 111111111 0011 122334445677766555 44 Q ss_pred ceEEEecCCceeeeeecchhhhhhcccCcCCCCHHHHHHHHHHHHHhhCCeEEEEeeCC---CCceEEEEeeCCcceEEE Q lcl|Aclame:pro 67 PLKIYQEDEYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDR---KGKVQALWPIDASKVTVY 143 (429) Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~l~~~PN~~~s~~~~~~~~~~~~l~~G~~~~~~~~~~---~g~~~~l~~l~p~~v~~~ 143 (429) ++++.....++ .......+..+|+ .--....+.....+...+.++.|.+.+.+..+. .|....+..++|..+... T Consensus 79 ~~~~~Ve~~~~-de~~~~avq~~Lr-~~~~~e~l~~~~~~~~r~a~vlGDgvf~l~wDp~K~~g~R~rv~~vDP~~~fp~ 156 (563) T protein:vir:74 79 GFDYLVEPDMG-DEGIRQSLNAYFR-TTFKREAIKAKFTSNKRWGLIRGDAHFYIHADPNKKAGERISVDEVDPRQIFLI 156 (563) T ss_pred CcEEecCcccc-CcchHHHHHHHHH-HHHHHhhhHHHHHHHHHhhhhhcceeEEEeeccccccCCCceEeecCCceeeec Confidence 44442222111 1111223444454 455556778888888899999999999998874 455667777777755443 Q ss_pred EcCCcceee---------------------eeeEEEeecccCce----------E------------------------- Q lcl|Aclame:pro 144 IDDVGLLNS---------------------KTKMWYVVNTGGQQ----------R------------------------- 167 (429) Q Consensus 144 ~~~~~~~~~---------------------~~~~~~~~~~~g~~----------~------------------------- 167 (429) .+.+..... .....|..+..|.. . T Consensus 157 ~dpd~v~g~~~v~v~~~~~~pdd~~~~~~r~~~~~~~lndeg~~~~~~~~dae~w~lg~wd~r~~~~~~~~~~~~~~~~~ 236 (563) T protein:vir:74 157 EDGSTVVGFHMVDIVQDFRSPDDPSKKLARRRTFRRVRNDEGMFTGRISSELTHWTLGNWDDRGAISDEQARRKEQVRSA 236 (563) T ss_pred cCCCCcccceeeecccCCCCCcchhccceeeeeeeeeeCCCCCccceeeeccchhccccccccCccchhhhcccchhhhh Confidence 322211000 00000110111110 0 Q ss_pred -----------EEccceEEEeecCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHHccCCcceEEEeCCCCCHHHHHH Q lcl|Aclame:pro 168 -----------VLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGDLNEDAKKV 236 (429) Q Consensus 168 -----------~~~~~evih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~~e~~~~ 236 (429) .+..--|.|++.-.+.+..+|.|-+.-+...++.......-......-+|.|-.++..-...+. ...+ T Consensus 237 ~~d~e~~~LP~pi~~iPiv~~~tip~~~s~WG~S~La~ll~~~~eLn~~~Td~s~i~~~tG~pi~vl~~~~p~d~-~~g~ 315 (563) T protein:vir:74 237 QHDEEEEELPEPISQLPLYRWRNKPPQNSSWGTSQLEGMETLAYALNQSLTDEDATIVFQGLGMYVTNASAPVDP-NTGE 315 (563) T ss_pred hhhchhhhccccccCccEEEcCCCCCcccccchhhHHHHHHHHHHHhhhhhHHHHHHHhcCCCeEEecccccccc-cccc Confidence 0001116778777788889999999999999988888877777777777766555542211111 0000 Q ss_pred HHHHHHHHhcccccccceeecCC---CceeEecCCChhHHHHHHHHHHHHH-HHHHHhcCChhhcCCccccccccHHHHH Q lcl|Aclame:pro 237 FRENFESMSSGLQNSHRIALMPV---GYQFQPISLNMSDAQFLENTELTIR-QIATAFGIKMHQLNDLSKATLNNIEQQQ 312 (429) Q Consensus 237 ~~~~~~~~~~g~~~~~~~~vl~~---g~~~~~~~~~~~d~~~~e~~~~~~~-~Ia~~fgvp~~~l~~~~~~~~~n~~~~~ 312 (429) ...|+ -..|.++-+++ +..+..++-.++-..+...+++... .++..-++|..-+|-.+.++-- . T Consensus 316 -~~~w~------vgpG~i~El~~~~~~g~l~~v~g~~~l~~~q~Hm~~l~eral~~~s~tPavA~G~vD~~~~~-----S 383 (563) T protein:vir:74 316 -LTDWN------IGPMQIVEIAGNRNDNYFERVSGVQDVSPFQDHMKWIDEKGIAEGSGTPEVAIGRVDVTSAE-----S 383 (563) T ss_pred -ccccc------cCCceeEeccCCccccceeeecchhhhHHHHHHHHHHHHHHHHhhccCcceeeccccccccc-----c Confidence 00010 12244566653 3457777776655444444555444 6788889999988843332210 0 Q ss_pred HHHHHHHHhHHHH--------------HHHHHHHHhhccchhh----------------cchhhhhhhhhhHhhhhHHHH Q lcl|Aclame:pro 313 QQFYTDTLQATLT--------------MYEQEMTYKLFLDSEL----------------DKGFYSKFNVDAILRADIKTR 362 (429) Q Consensus 313 ~~~~~~~l~P~~~--------------~i~~~l~~~ll~~~~~----------------~~~~~~~fd~~~l~~~d~~~~ 362 (429) -.-++-.|.|+.. ++...+.+.||..-+. .....+..-+...+..|.... T Consensus 384 GiALeL~L~PL~a~~~ek~l~l~~~mr~~r~~~~~~lL~~~erl~~~g~~~~~~g~~~~~~~~~v~ivf~p~~P~d~~~v 463 (563) T protein:vir:74 384 GISLELQLKPLLAANEEKELEMIVVMDQFLHDWMTMWLPAYESDFQEQDGSRPFASADLLNECSVVCIFADPMPVNKTQV 463 (563) T ss_pred hhhhhhhhhHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHhhhhcccccccccccCCceEEEEEeCCCCCccHHHH Confidence 0112222333322 2222222222211111 000011222356688899999 Q ss_pred HHHHHHHHhCCCCCHHHHHHHh---CCCCCCCccee--eecc-------ccccccccccccCCCCCCCCCCCCCCCCCC Q lcl|Aclame:pro 363 YEAYRTGIQGGFLKPNEARSKE---DLPPEAGGDRL--LVNG-------NMLPIDMAGQAYLKGGDTNGEVSKEGNEGN 429 (429) Q Consensus 363 ~~~~~~~~~~g~~t~NE~R~~~---Gl~~~~~gD~~--~~~~-------n~~~~~~~~~~~~~~g~~~~~~~~~~~~~n 429 (429) .+....++.+|+++..-+-++| |++--+--++. .... .-+-.+... ...-.|+.-..++...+.|| T Consensus 464 v~~~~tl~~aGiiSretAv~~L~~~g~~~pdae~e~~~ie~~~i~~~~~a~a~ad~~~-~~~a~~~~g~~~~~~dd~g~ 541 (563) T protein:vir:74 464 TQDTLLLQQAHLILRKMAVAKLRSIGWEYPEVDDQGNALTDDDIADMLLAEAEADASL-GLSAMDNGGAGEQQFDDQGN 541 (563) T ss_pred HHHHHHHHHcCchhHHHHHHHHHhCCCCCCcHHHHHhhcCHHHHHHHHHHHhhccCcc-cceecccCCCCcccccccCC Confidence 9999999999999998887776 65532100100 0000 001111111 00111222222233333355 Done!