Query lcl|Aclame:protein:vir:95475|NCBI_annot:hypothetical protein ORF038|genbank:acc:YP_001294631;genbank:gi:149408197;genbank:GeneID:5237042 Match_columns 771 No_of_seqs 15 out of 19 Neff 3.2 Searched_HMMs 1612 Date Mon Dec 2 05:45:20 2013 Command /home/guerois/workspace/virfam/python/lib/hhsearch//hhsearch2 -i .//seq/seq_62 -d /home/guerois/workspace/virfam/python/profile_database/capsid_neck_tail.hhm -glob -cpu 7 -o .//seq/HHR/seq_62_vs_rec_db.hhr No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM 1 protein:vir:95475 Length: 771 100.0 0E+00 0E+00 2131.2 62.4 771 1-771 1-771 (771) 2 protein:vir:2625 Length: 715 # 100.0 0E+00 0E+00 1802.3 58.0 700 1-771 1-715 (715) 3 protein:vir:3133 Length: 911 # 100.0 1E-233 6E-237 1298.0 46.3 734 1-771 1-850 (911) 4 protein:vir:8837 Length: 513 # 100.0 2.3E-30 1.4E-33 183.1 33.6 504 1-771 1-513 (513) 5 protein:vir:94602 Length: 1012 99.7 2.7E-16 1.6E-19 106.0 32.9 699 1-771 1-1010(1012) 6 protein:vir:103790 Length: 768 99.7 2.8E-14 1.7E-17 94.9 47.8 662 1-771 1-768 (768) 7 protein:vir:80177 Length: 1027 99.7 7.8E-16 4.8E-19 103.4 32.4 709 1-771 5-1022(1027) 8 protein:vir:102644 Length: 594 99.7 7.2E-15 4.4E-18 98.1 36.5 545 1-770 1-594 (594) 9 protein:vir:107423 Length: 681 99.7 9.1E-14 5.7E-17 92.1 43.8 615 1-769 1-681 (681) 10 protein:vir:98487 Length: 681 99.7 9.1E-14 5.7E-17 92.1 43.8 615 1-769 1-681 (681) 11 protein:vir:107802 Length: 681 99.7 9.1E-14 5.7E-17 92.1 43.8 615 1-769 1-681 (681) 12 protein:vir:8887 Length: 808 # 99.7 1.1E-13 6.9E-17 91.6 44.1 676 1-771 1-805 (808) 13 protein:vir:7329 Length: 825 # 99.7 2E-14 1.2E-17 95.7 35.7 612 1-771 1-693 (825) 14 protein:vir:2203 Length: 794 # 99.6 2.3E-13 1.4E-16 89.9 43.2 655 1-771 1-791 (794) 15 protein:vir:10452 Length: 794 99.6 2.4E-13 1.5E-16 89.7 43.9 661 1-771 1-791 (794) 16 protein:vir:6326 Length: 826 # 99.6 3.4E-13 2.1E-16 88.9 41.5 689 1-771 1-823 (826) 17 protein:vir:105647 Length: 800 99.6 7.6E-13 4.7E-16 87.0 43.7 670 1-771 1-797 (800) 18 protein:vir:80253 Length: 777 99.6 9.9E-13 6.1E-16 86.4 39.7 671 1-771 1-774 (777) 19 protein:vir:97014 Length: 800 99.5 1.9E-12 1.2E-15 84.8 39.1 680 1-771 1-797 (800) 20 protein:vir:99677 Length: 794 99.5 4.9E-12 3E-15 82.6 45.7 673 1-771 1-791 (794) 21 protein:vir:94713 Length: 785 99.5 4.9E-12 3.1E-15 82.6 41.9 674 1-771 1-782 (785) 22 protein:vir:94583 Length: 792 99.5 1.1E-11 6.9E-15 80.6 44.7 668 1-771 1-789 (792) 23 protein:vir:95324 Length: 823 99.4 2.3E-11 1.4E-14 78.9 46.1 683 1-770 1-823 (823) 24 protein:vir:3366 Length: 801 # 99.4 5.3E-11 3.3E-14 76.9 41.3 683 1-771 1-798 (801) 25 protein:vir:78957 Length: 826 99.4 6.3E-11 3.9E-14 76.5 43.3 664 1-771 1-826 (826) 26 protein:vir:1543 Length: 801 # 99.4 6.6E-11 4.1E-14 76.4 41.2 675 1-771 1-798 (801) 27 protein:vir:7021 Length: 803 # 99.3 9.9E-11 6.2E-14 75.4 45.8 659 1-771 1-800 (803) 28 protein:vir:1778 Length: 680 # 99.2 1.6E-11 9.8E-15 79.8 23.0 456 1-546 141-680 (680) 29 protein:vir:103341 Length: 806 99.1 2.2E-09 1.3E-12 68.1 46.6 668 1-771 1-803 (806) 30 protein:vir:3529 Length: 477 # 98.9 2.6E-08 1.6E-11 62.2 26.2 417 192-764 1-477 (477) 31 protein:vir:105428 Length: 472 98.8 3.2E-08 2E-11 61.6 27.2 401 208-766 1-472 (472) 32 protein:vir:177 Length: 472 # 98.8 3.7E-08 2.3E-11 61.3 25.9 403 208-766 1-472 (472) 33 protein:vir:78703 Length: 905 98.8 4.9E-08 3.1E-11 60.6 39.6 636 1-771 167-901 (905) 34 protein:vir:2109 Length: 472 # 98.7 7.6E-08 4.7E-11 59.6 28.0 421 208-766 1-472 (472) 35 protein:vir:100960 Length: 472 98.7 8.4E-08 5.2E-11 59.4 28.7 428 186-766 1-472 (472) 36 protein:vir:9268 Length: 472 # 98.7 8.5E-08 5.3E-11 59.3 29.6 413 208-766 1-472 (472) 37 protein:vir:105563 Length: 396 98.5 2.4E-07 1.5E-10 56.9 20.9 363 1-514 1-396 (396) 38 protein:vir:100022 Length: 976 98.0 9.2E-06 5.7E-09 48.2 36.9 637 1-771 208-972 (976) 39 protein:vir:105525 Length: 472 97.9 1.3E-05 7.8E-09 47.5 27.6 405 208-764 1-472 (472) 40 protein:vir:108312 Length: 458 97.9 1.5E-05 9.1E-09 47.1 25.5 375 261-766 1-458 (458) 41 protein:vir:352 Length: 536 # 96.2 0.00087 5.4E-07 37.4 28.1 506 1-771 9-536 (536) 42 protein:vir:93631 Length: 580 29.3 1.7 0.001 19.4 23.0 485 1-633 1-580 (580) No 1 >protein:vir:95475 Length: 771 # NCBI annotation: hypothetical protein ORF038 # Family: family:all:5234 # MgeID: mge:1570 # MgeName: PA11 # Cross-refs: genbank:acc:YP_001294631;genbank:gi:149408197;genbank:GeneID:5237042 Probab=100.00 E-value=0 Score=2131.19 Aligned_cols=771 Identities=100% Similarity=1.501 Sum_probs=769.7 Q ss_pred CchhhhhhhhccccceeeeccchhcCCCCccccceeeeeccccchhhhhcceeecCCceeecceeeccCceeeeeechhh Q lcl|Aclame:pro 1 MAKTTNAAEFNTFVGGLITEASPLTFPQNASIDEVNFILNRDGSRNRRNGMDFENGATKVVCNTLVPADGTIAVTSHNWE 80 (771) Q Consensus 1 Ma~~~~~~e~ntFv~GliTEan~Lt~P~nas~De~N~~L~k~G~r~RR~Gl~~E~s~~~~l~~~~~~s~~~~~vt~~~W~ 80 (771) |||+++|+++|+||+|||||||||||||||++||+||+|+|||+|+||+||++|+|++||||++++|++++++|++|+|+ T Consensus 1 m~~~~~~~~vNtFv~GliTEas~ltfpqnasiDe~N~~l~rdG~r~RR~g~~~E~~~~~vls~~~vpa~g~~~v~~~~W~ 80 (771) T protein:vir:95 1 MAKTTNAAEFNTFVGGLITEASPLTFPQNASIDEVNFILNRDGSRNRRNGMDFENGATKVVCNTLVPADGTIAVTSHNWE 80 (771) T ss_pred CCcccchhHHhhhhhheeeccccccCCccceeeeeeeeecCCCcchhhceeeeecCCceEEEEEEecccceEEeeeechh Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred hccCccceeEEEEEEccEEEEEecCCceeeheeeEeeecceeCCCcceeeEEeeEEEEEEcCCcceEEEeccCCceeeEE Q lcl|Aclame:pro 81 NAGGEVGRWISLVQVGTELKFFQTTGETLSEGNFYNYQFVNMSPSHKLSYAVVDGLLVVANGSRDIYVFEYDSGSVSVTT 160 (771) Q Consensus 81 ~~~g~v~~~~l~~q~g~~l~~~d~t~~~lSn~~l~~~~fv~~sP~~~is~~~v~G~lVva~~~~~~~i~~~~~~s~~~~t 160 (771) |+||+|++|||+||+|++|||||+|.+|||+++++|++|+||||+|+||+++|+|+||||+|+|++++++++++++++++ T Consensus 81 na~G~v~~~~livqvg~~l~f~q~t~~pLs~~n~~~~a~~nlSPsh~isv~v~~G~livanp~i~~~~~~~d~~t~s~t~ 160 (771) T protein:vir:95 81 NAGGEVGRWISLVQVGTELKFFQTTGETLSEGNFYNYQFVNMSPSHKLSYAVVDGLLVVANGSRDIYVFEYDSGSVSVTT 160 (771) T ss_pred hcccccCcEEEEEEeccEEEEEecCCCcccccceeeeecceeccceeEEEEEeeeEEEEecCCccEEEEEecCCcceeEe Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred EEEEEEEeeeeccccccCcceeccccccCCCccCchhheeeeeccccceeeeeccCCCCcceEEEccccccCCcCcchhe Q lcl|Aclame:pro 161 KRLLVRDLFGVQDIVNGVDLRQGNDIATRPTVQTNAHIYNLRNQTFGVPRVTWHSNEPSDPIVTFRSAASGKFPSNSDSV 240 (771) Q Consensus 161 ~~l~iRd~~~l~d~~~g~~~~~~~~~~~rpttlS~eh~YnL~NqgW~~~~~~~~s~s~~~~vv~~~~~~~G~yPSnaD~~ 240 (771) ++|+||+||+||||++|+|+||+++|++||++|||||+||||||||++||..++++++++|+||||++++|+||||+|+| T Consensus 161 ~~ll~r~rf~~q~~~~G~d~~~~~~~~~~gt~~tn~~iynlyN~gw~~pk~~~~snt~~~~iV~~y~a~~g~~pS~sd~~ 240 (771) T protein:vir:95 161 KRLLVRDLFGVQDIVNGVDLRQGNDIATRPTVQTNAHIYNLRNQTFGVPRVTWHSNEPSDPIVTFRSAASGKFPSNSDSV 240 (771) T ss_pred eeeeeeehhhccccccccceecccccccCCcccCchhheeccccceeccccccccCCccccceEeeeccCCCCcCCceee Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred eeccccccCCCcccccccchhhhhccccccccCCCcceEEEeeecCcccceeeeecccccccccceeeecchhhccCCce Q lcl|Aclame:pro 241 NLALSKRADVEPSTTDRFRAEDIVLNPIGTYETARGFFIIDAMARGKSRLEEIVKLKQRYPSLSFGVSSLPQDETPGGAS 320 (771) Q Consensus 241 n~~~~~~s~~e~~~~~~F~~~~~~~n~~Gs~~aarG~yI~d~~~~~~s~~~~~~~~~~~~p~~~~~t~~~p~d~~~g~~t 320 (771) |+|++|++|+||++++||+||++++||||+++|||||||||||+++++++++++|++|+||+.++..+|+||++++++++ T Consensus 241 N~a~~k~~~~Ei~t~~~f~~~~~~~~~~Gt~~~~~G~yi~da~~~g~~~Lt~~ve~~gr~~s~~~~~~~l~~~~t~~~~~ 320 (771) T protein:vir:95 241 NLALSKRADVEPSTTDRFRAEDIVLNPIGTYETARGFFIIDAMARGKSRLEEIVKLKQRYPSLSFGVSSLPQDETPGGAS 320 (771) T ss_pred ccccchhhccceeeecccchhhhhhcccCcccccCcceeeehhhhcccccceeeeccccchhhhccccccccccCCCCce Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred eeeeecceeEEeeecceeecccccCCcccceeEEEeeecchhhccccccCCCCcCchhhhhhhcCCCEEeecCCCceeEE Q lcl|Aclame:pro 321 VVCEYAGRVWYAGFSGQIIDGDDQSPRLVSYILFSQLVDSPADIVNCYQDGDPTSTEEPELVDTDGGFIRIEGAHDIINL 400 (771) Q Consensus 321 ~v~~~aGRv~y~g~~~~~~~~~~~~p~~~~yv~fSqli~s~~~lg~CyQ~~DPts~~~~dl~dtDGG~I~I~ga~~Iv~m 400 (771) +||+|||||||+|+.|.++++||++||+.+||+||||++||++|+||||++|||++|++||+|||||+|||+|||+|++| T Consensus 321 ~vaeyagRvwYag~~~~~iD~dkng~~~~~~ilfSqLv~s~~di~nCyQd~DPTsee~~dLidTDGg~iri~gah~ii~L 400 (771) T protein:vir:95 321 VVCEYAGRVWYAGFSGQIIDGDDQSPRLVSYILFSQLVDSPADIVNCYQDGDPTSTEEPELVDTDGGFIRIEGAHDIINL 400 (771) T ss_pred eEEeeeeeEEEecceeEEeeccccCCceeeeEeeehhhcchhhcccccccCCCchhhhhhhhhcCCCEEEecCCCCceeE Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred EeecceeEEEecceEEEEEecccceeeecceeeeeeeeeeecCccceEEeCCeEEEEecCceEEecccccCcccccccCc Q lcl|Aclame:pro 401 VNVGSAVMVVAANGIWMIQGGSDYGFTATNYLVTKISEHGCSSPNSVVVVDNSFMYWGDDGIYHLTRNQYGDYVANNLTE 480 (771) Q Consensus 401 v~~~ssLlVft~nGVWal~G~S~~~fsAt~y~V~KISd~GcvspnSIV~id~aVvYwSDsGI~~L~~ne~g~~ss~nLte 480 (771) |+|+++|+|||+||||||+|+|+++|+|++|+|+|||++||+||||||++|++||||||+|||+|+.||+|+++|||||| T Consensus 401 v~f~~sLlvfc~NGVWAi~ggsd~g~tAtdY~ltKIs~vg~sspnSvVvvg~~i~ywsdtgIyal~~Ndfn~~tAqnLTe 480 (771) T protein:vir:95 401 VNVGSAVMVVAANGIWMIQGGSDYGFTATNYLVTKISEHGCSSPNSVVVVDNSFMYWGDDGIYHLTRNQYGDYVANNLTE 480 (771) T ss_pred EEecceEEEEEecceEEEEeccCCceeeeeeEEEEeeeeccCCCccEEEecceEEEeeCCceEEEeecccCcchhhccch Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred hhhhhhhhhcChhHhcceeEEEEeeccEEEEEecccccccccccceeEEecccccceeeeecceeccceeeeeeeeeeCC Q lcl|Aclame:pro 481 KTIQKYYEKIPSDAILNATGFYDSYDKKVKWLYNTVLDGRTEPVTELVFDLALGAFYPSKIGSLTAGRLPIPVGSVKIPP 560 (771) Q Consensus 481 ~tIqt~~~sip~~~k~~~~g~yD~~~~~v~wly~e~~d~~~~y~tElVf~L~~~afY~~ki~s~~ags~~~~i~s~~vp~ 560 (771) +|||+||++||.++++|++|+||++++|++|+||+++|++++|+|||||||++|||||||+++++||+++|+||++++|+ T Consensus 481 kTIq~~~~~I~~dk~knVtg~fd~~e~rvyw~yPn~~D~~~e~~t~LV~dLalgaFYp~~i~~~~ag~l~~~vg~~~~p~ 560 (771) T protein:vir:95 481 KTIQKYYEKIPSDAILNATGFYDSYDKKVKWLYNTVLDGRTEPVTELVFDLALGAFYPSKIGSLTAGRLPIPVGSVKIPP 560 (771) T ss_pred HHHHHHHhhcchhhhcceEEEEEccCCEEEEEecceecCCCcceeeeeeeecccccccccccccccCccceeeeeeecCc Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred ceeeecceEEeecccceeeccceeeeeeeeeeeeeeeeEEEEEEEcCCCceEEEeeecCCchhhccccCCcccchhHhhh Q lcl|Aclame:pro 561 YKLVETGEEVTVASEQVTATGELVTVKVSTRSPVIRETKYIIVEKLSSPMRISFGGYTDEEFVDWKSVDGIGVDAPAYLL 640 (771) Q Consensus 561 y~~~~t~~~V~v~~~~vv~~~~~v~~~~~~~~~~~r~~~y~~~~~~g~~~~~sF~~~~~d~F~Dw~~~~~~gvd~~sy~~ 640 (771) |++++|+++|+|+++||++++++|++.+++++++.|++||++++++|++|+|+|+.|++++|+|||+|||+||||+||++ T Consensus 561 ~~lv~T~~eV~v~~~~v~~tG~~vtV~~~~r~~~~~~~~y~~~~~dg~~g~~~Fa~~~~~~f~DW~sv~~~~vdy~sy~~ 640 (771) T protein:vir:95 561 YKLVETGEEVTVASEQVTATGELVTVKVSTRSPVIRETKYIIVEKLSSPMRISFGGYTDEEFVDWKSVDGIGVDAPAYLL 640 (771) T ss_pred cccccccceEEecceeeEecCCceEEEEEEeeccccceEEEEEEecCCCeeEEeccccCcceeecccCCCcccchHHHHH Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred hhccccccceeeeecceEEEEEeeecceeEecccceEEEcCccceEEEEEEeeccCCCCCcccchheeeeeeehcccCCC Q lcl|Aclame:pro 641 TGYLAGGDYQREKFVPYITFHFKKTEDGFVEDAEGDWTPTNQSSCMVQSQWSWTNSPASNKWGRTWQAYRFRRHFFPDNI 720 (771) Q Consensus 641 tgy~~~gd~~r~K~~pyl~~~~~~TEd~~t~d~~g~~~~~n~SScl~~~~w~~s~~~~~~kw~~~~q~Yr~~r~~~p~~~ 720 (771) +||++||||||+|++||||+||++|||||++|++|+|||+|||||||++||+|+++++++||+|||||||||||++|+++ T Consensus 641 ~gY~~~gd~~~~k~~PYit~y~~~tedg~v~~~~g~~~p~n~sSclm~~sw~ws~s~~t~k~~~~~eaYk~~~~~~p~~~ 720 (771) T protein:vir:95 641 TGYLAGGDYQREKFVPYITFHFKKTEDGFVEDAEGDWTPTNQSSCMVQSQWSWTNSPASNKWGRTWQAYRFRRHFFPDNI 720 (771) T ss_pred hhhhccchheeeeccceEEEEEEeecccceecccccccccCCcceEEEEEeeeecCCCCCccccchheeeecceeccCCc Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred CcCCCCcceeeeeccccceeeeEEEEEEEecCCCceEEEeEEEEEEeecCC Q lcl|Aclame:pro 721 DNQFDDGNSVVETKSRLRGSGKVLSLYITTEPKKNLHIYGWSMLVDVNGTV 771 (771) Q Consensus 721 ~~~f~~~~~VV~TK~~~RG~G~~~~~~f~se~~KD~~llG~~~~~~~~g~~ 771 (771) +++|+++++||+||+||||+||+|+|||+||||||||||||+|+|||+|+| T Consensus 721 ~~~~yp~~~VV~TKsriRG~Gr~~~~rf~s~~gKdlhl~Gysil~~~~~~~ 771 (771) T protein:vir:95 721 DNQFDDGNSVVETKSRLRGSGKVLSLYITTEPKKNLHIYGWSMLVDVNGTV 771 (771) T ss_pred chhcCCccceeeeeheeeecceEEEEEEEecCCcceEEEeEEEEEeecCcC Confidence 999999999999999999999999999999999999999999999999999 No 2 >protein:vir:2625 Length: 715 # NCBI annotation: gp27 # Family: family:all:5234 # MgeID: mge:55 # MgeName: SIO1 # Cross-refs: genbank:acc:NP_064766;genbank:gi:9964636;genbank:GeneID:1263056 Probab=100.00 E-value=0 Score=1802.30 Aligned_cols=700 Identities=31% Similarity=0.528 Sum_probs=682.4 Q ss_pred CchhhhhhhhccccceeeeccchhcCCCCccccceeeeeccccchhhhhcceeecCCceeecceeeccCceeeeeechhh Q lcl|Aclame:pro 1 MAKTTNAAEFNTFVGGLITEASPLTFPQNASIDEVNFILNRDGSRNRRNGMDFENGATKVVCNTLVPADGTIAVTSHNWE 80 (771) Q Consensus 1 Ma~~~~~~e~ntFv~GliTEan~Lt~P~nas~De~N~~L~k~G~r~RR~Gl~~E~s~~~~l~~~~~~s~~~~~vt~~~W~ 80 (771) |||+++|+++|+||+|||||||||||||||++||+||+|+|||+|+||+||++|+ +||||++++|+++ +|++|+|+ T Consensus 1 m~~~~~~~~vNtFv~GliTEas~ltfpqnasiDe~N~~l~rdG~r~RR~g~~~E~--~~vls~~~vp~ga--lv~~~~W~ 76 (715) T protein:vir:26 1 MPQSLTQRTVNTFIKGLITEASELTFPENASVDELNCSLGRDGTRRRRKAVTLED--NHVLSDVVVPEGA--LVQTLDWY 76 (715) T ss_pred CCcccchhHHhhhhhheeeccccccCCccceeeeeeeeecCCCcchhhccceeec--ceEEEEEeecCce--eeeeechh Confidence 9999999999999999999999999999999999999999999999999999999 6999999999888 79999999 Q ss_pred hccCccceeEEEEEEccEEEEEecCCceeeheee-------EeeecceeCCCc-ceeeEEeeEEEEEEcCCcceEEEecc Q lcl|Aclame:pro 81 NAGGEVGRWISLVQVGTELKFFQTTGETLSEGNF-------YNYQFVNMSPSH-KLSYAVVDGLLVVANGSRDIYVFEYD 152 (771) Q Consensus 81 ~~~g~v~~~~l~~q~g~~l~~~d~t~~~lSn~~l-------~~~~fv~~sP~~-~is~~~v~G~lVva~~~~~~~i~~~~ 152 (771) |+||+|++|||+||+|++|||||+|.+|||++++ +|++||||||+| ++++++|||+||||+|+|++++++++ T Consensus 77 na~G~v~~~~livqvg~~l~f~q~t~~pLs~~n~~~svdl~~~~~~vn~SPsh~~v~v~~~~G~livanp~i~~~~~~~d 156 (715) T protein:vir:26 77 NVAGQVNLEFLVVQVNNILYFYEKSTDPLSANKYSGSVDLNTHSASNNLSPSEERVQVTSLNGYLIVASPAINTFYLGFN 156 (715) T ss_pred hcccccCcEEEEEEeccEEEEEeccCCccccCceeEEeeecceecccccccceeEEEEEEeeeEEEEecCCccEEEEEec Confidence 9999999999999999999999999999999999 799999999999 89999999999999999999999999 Q ss_pred CCceeeEEEEEEEEEe-eeeccccccCcceeccccccCCCccCchhheeeeeccccceeeeeccCCCCcceEEEcccccc Q lcl|Aclame:pro 153 SGSVSVTTKRLLVRDL-FGVQDIVNGVDLRQGNDIATRPTVQTNAHIYNLRNQTFGVPRVTWHSNEPSDPIVTFRSAASG 231 (771) Q Consensus 153 ~~s~~~~t~~l~iRd~-~~l~d~~~g~~~~~~~~~~~rpttlS~eh~YnL~NqgW~~~~~~~~s~s~~~~vv~~~~~~~G 231 (771) ++++++++++|+||+| |+|| |++++++++|++||++|||||+||||||||++|+++|++|.+++|+| |++++| T Consensus 157 ~~t~s~t~~~ll~r~r~f~~q----g~d~~~g~~y~~~gt~~tn~~iynlyN~gw~~p~gt~~~N~~~~yiV--ypa~s~ 230 (715) T protein:vir:26 157 TSTEAFTATSISFKERDFEWQ----GSDVDVTSLYFGEGTSVSNQRIYDTYNVGWVGPKGSAALNTYGSYIV--YPALTH 230 (715) T ss_pred CCcceeEeeEEEEEeeeheee----ccccccccccccCCcccCchhheecccceeecceeEEEEcCCCCceE--eccccc Confidence 9999999999999999 9999 99999999999999999999999999999999999999999999999 999999 Q ss_pred CCcCcchheeeccccccCCCcccccccchhhhhccccccccCCCcceEEEeeecCcccceeeeecccccccccceeeecc Q lcl|Aclame:pro 232 KFPSNSDSVNLALSKRADVEPSTTDRFRAEDIVLNPIGTYETARGFFIIDAMARGKSRLEEIVKLKQRYPSLSFGVSSLP 311 (771) Q Consensus 232 ~yPSnaD~~n~~~~~~s~~e~~~~~~F~~~~~~~n~~Gs~~aarG~yI~d~~~~~~s~~~~~~~~~~~~p~~~~~t~~~p 311 (771) +|||++|+ |+|++|++|.||++ |+++|||||||+|+|+++|+++||+++ ++|||+ T Consensus 231 ~~~S~kd~-n~afsk~ad~ei~t--------------Gt~~~~~G~yi~D~~~~g~~~leeev~-k~R~rs--------- 285 (715) T protein:vir:26 231 PWYSGKDA-NGAFNKADWLEIYT--------------GSSLASNGHYVLDVFNKARTGLTTEVE-TGRFRS--------- 285 (715) T ss_pred ccCCCccc-ccccChhhcccccc--------------ccccccCceEEEeeeecCCccchhhhh-cCCCcc--------- Confidence 99999999 99888888877776 999999999999999999999999999 999998 Q ss_pred hhhccCCceeeeeecceeEEeeecceeecccccCCcccceeEEEeeecchhhccccccCCCCcCchhhhhhhcCCCEEee Q lcl|Aclame:pro 312 QDETPGGASVVCEYAGRVWYAGFSGQIIDGDDQSPRLVSYILFSQLVDSPADIVNCYQDGDPTSTEEPELVDTDGGFIRI 391 (771) Q Consensus 312 ~d~~~g~~t~v~~~aGRv~y~g~~~~~~~~~~~~p~~~~yv~fSqli~s~~~lg~CyQ~~DPts~~~~dl~dtDGG~I~I 391 (771) +|+|||||||+| +++||++|| ||||||++||++|+||||++|||++|++||+|||||+||| T Consensus 286 ----------v~~yaGrV~yag-----iD~dkng~r----ilfSqLv~s~~di~nCyQd~DPTsee~~dLidTDGg~iri 346 (715) T protein:vir:26 286 ----------VAAYAGRVFYAG-----IDSAKNGGK----VYFSRLTERMSDVGNCYQVNDPTSEVLSDLLDTDGGVVRI 346 (715) T ss_pred ----------eeeecceEEEee-----cccccCCCe----EEEehhhcchhhcccccccCCCchhhhhhhhhcCCCEEEe Confidence 999999999999 999999999 9999999999999999999999999999999999999999 Q ss_pred cCCCceeEEEeecceeEEEecceEEEEEecccceeeecceeeeeeeeeeecCccceEEeCCeEEEEecCceEEecccc-c Q lcl|Aclame:pro 392 EGAHDIINLVNVGSAVMVVAANGIWMIQGGSDYGFTATNYLVTKISEHGCSSPNSVVVVDNSFMYWGDDGIYHLTRNQ-Y 470 (771) Q Consensus 392 ~ga~~Iv~mv~~~ssLlVft~nGVWal~G~S~~~fsAt~y~V~KISd~GcvspnSIV~id~aVvYwSDsGI~~L~~ne-~ 470 (771) +|||+|++||+|+++|+|||+|||||| +|++++|+|++|+|+|||++||++|||||++|++||||||+|||+|+.|| + T Consensus 347 ~gah~ii~Lv~f~~sLlvf~~NGVWAi-~G~d~g~tATdY~ltKIs~vg~sspnSvVvv~~~i~~WsdtGIyal~~Nd~f 425 (715) T protein:vir:26 347 PDAHNIRKLHVLGASLLVFAENGVWAV-AGVDNVFRATEYAITRISDVGLSNENSFVVADGIPIWWGKTGIYAVQQSENL 425 (715) T ss_pred cCCCCceeEEEecceEEEEEecceEEE-eccCCceeeeeeEEEEeeeeccCCCccEEEecceEEEeeCCcEEEEEecccc Confidence 999999999999999999999999999 66889999999999999999999999999999999999999999999999 9 Q ss_pred CcccccccCchhhhhhhhhcChhHhcceeEEEEeeccEEEEEec---ccccccccccceeEEecccccceeeeecceecc Q lcl|Aclame:pro 471 GDYVANNLTEKTIQKYYEKIPSDAILNATGFYDSYDKKVKWLYN---TVLDGRTEPVTELVFDLALGAFYPSKIGSLTAG 547 (771) Q Consensus 471 g~~ss~nLte~tIqt~~~sip~~~k~~~~g~yD~~~~~v~wly~---e~~d~~~~y~tElVf~L~~~afY~~ki~s~~ag 547 (771) |+++||||||+|||+||++||.++++|++|+||++++|++|+|| ++.+|+|+.. |||||++||||++|+++ +|| T Consensus 426 n~~tAqNLTekTIq~~~~~I~~dk~knVtg~fd~~e~rVyW~yPn~dt~vdykyd~v--LV~dLalgaFYp~~v~~-~a~ 502 (715) T protein:vir:26 426 NTPTAQNLSLSTIQTLWNNISNAKKAQVTVEYDKINQRVFWFYPDNDESVDYKYNNI--LVMDLALQAFYPWRVED-EAS 502 (715) T ss_pred CcchhhccchHHHHHHHhhcchhhhcceEEEEEccCCEEEEEEcCCceeeceeecCe--EEEEecccccccccccc-ccc Confidence 99999999999999999999999999999999999999999996 5667777765 99999999999999999 999 Q ss_pred ceeeeeeeeeeCCceeeecceEEeecccceeeccceeeeeeeeeeeeeeeeEEEEEEEcCCCceEEEeeecCCchhhccc Q lcl|Aclame:pro 548 RLPIPVGSVKIPPYKLVETGEEVTVASEQVTATGELVTVKVSTRSPVIRETKYIIVEKLSSPMRISFGGYTDEEFVDWKS 627 (771) Q Consensus 548 s~~~~i~s~~vp~y~~~~t~~~V~v~~~~vv~~~~~v~~~~~~~~~~~r~~~y~~~~~~g~~~~~sF~~~~~d~F~Dw~~ 627 (771) |++|+||+.+||+|.+++|+++| |+++||+++++++++.++++++++||+||++++++|++|+|+|++|++|+|+|||+ T Consensus 503 ~~~~~ig~~~~~~~~~~~t~~~v-v~~~~v~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~dw~s 581 (715) T protein:vir:26 503 STSYIIGTSYYGGLGSTSTETQV-VNGADVVVNGSDNVVATLYRDYLEGDSEIKLLVRDGTTGKMTFATFRGDTYLDWGS 581 (715) T ss_pred ccceeeeeeeeCCcccccchhhe-eccceEEEeccceEEEEeecccccccceEEEEEEcCCceeEEEecccCceeeeccc Confidence 99999999999999999999999 99999999999999999999999999999999999999999999999999999999 Q ss_pred cCCcccchhHhhhhhccccccceeeeecceEEEEEeeecceeEecccceEEEcCccceEEEEEEeeccCCCCCcccchhe Q lcl|Aclame:pro 628 VDGIGVDAPAYLLTGYLAGGDYQREKFVPYITFHFKKTEDGFVEDAEGDWTPTNQSSCMVQSQWSWTNSPASNKWGRTWQ 707 (771) Q Consensus 628 ~~~~gvd~~sy~~tgy~~~gd~~r~K~~pyl~~~~~~TEd~~t~d~~g~~~~~n~SScl~~~~w~~s~~~~~~kw~~~~q 707 (771) |||+||+++||.+|||+||+|++||++|||++|||||+++++| |||+|||||||++||+|+++++++| | T Consensus 582 -----~d~~~~~~~gy~~~gd~~~~k~~pyvt~~~~~tedg~v~~~~g-~~p~n~sSclm~~sw~ws~s~st~~-----e 650 (715) T protein:vir:26 582 -----ADYKSFAEAGYDFMGDITTFKNAPYVTTYMRVTEDGYVASGAG-YEFINPSSCLMSVSWNLSKSGSTPR-----E 650 (715) T ss_pred -----cchhhHHHhhhhhcccceeeecCceEEEEEEEecccceeccCC-ccccCCcceEEEEEeeeccCCCChh-----h Confidence 9999999999999999999999999999999999999999999 9999999999999999999999988 9 Q ss_pred eeeeee--hcccCCCCcCCCCcceeeeeccccceeeeEEEEEEEecCCCceEEEeEEEEEEeecCC Q lcl|Aclame:pro 708 AYRFRR--HFFPDNIDNQFDDGNSVVETKSRLRGSGKVLSLYITTEPKKNLHIYGWSMLVDVNGTV 771 (771) Q Consensus 708 ~Yr~~r--~~~p~~~~~~f~~~~~VV~TK~~~RG~G~~~~~~f~se~~KD~~llG~~~~~~~~g~~ 771 (771) |||||| +++|++++.+|+++++|| ||+||||+||+|+|||+||||||||||||+|+=--+-.- T Consensus 651 aYk~~~~~~~~p~~~s~~~yp~~~Vv-TKsriRG~Gr~~~~rf~s~~gKdlhl~Gysilg~~~~~~ 715 (715) T protein:vir:26 651 IYKLKDVPVVNPNDLSSINYPTDTVV-TKSKVRGRGRSMKFRFESVAGKDFHLVGYEVIGAKNNSY 715 (715) T ss_pred hheecceeeeCCCccccccCCcceeE-eeeeeeccceEEEEEEEecCCcceEEEeEEEEecccCCC Confidence 999999 999999999999999888 999999999999999999999999999999985444333 No 3 >protein:vir:3133 Length: 911 # NCBI annotation: hypothetical protein # Family: family:all:5234 # MgeID: mge:64 # MgeName: VpV262 # Cross-refs: genbank:acc:NP_640315;genbank:gi:21234408;genbank:GeneID:956056 Probab=100.00 E-value=9.8e-234 Score=1298.03 Aligned_cols=734 Identities=24% Similarity=0.320 Sum_probs=660.9 Q ss_pred CchhhhhhhhccccceeeeccchhcCCCCccccceeeeeccccchhhhhcceeecCCceeecceeeccCceeeeeechhh Q lcl|Aclame:pro 1 MAKTTNAAEFNTFVGGLITEASPLTFPQNASIDEVNFILNRDGSRNRRNGMDFENGATKVVCNTLVPADGTIAVTSHNWE 80 (771) Q Consensus 1 Ma~~~~~~e~ntFv~GliTEan~Lt~P~nas~De~N~~L~k~G~r~RR~Gl~~E~s~~~~l~~~~~~s~~~~~vt~~~W~ 80 (771) ||+++++++++++|+||+||+|.++|.|++++|.+||.++|.|..+||+||++|+|++|||+++.+.+++++++++++|+ T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (911) T protein:vir:31 1 MAARKGAVNRFTPVRGWVTEGNLANYGQDVALDVENMDIEKTGLTQRRFGLFAETSSEQFLSTFTATARARGLLAVKEWR 80 (911) T ss_pred CccccccccccccceeeeecCchhhcCceeEeeeccccchhcccchhheeeeeccchhhhhhhhhhhhhhcceeehhhHH Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred hccCccceeEEEEEEccEEEEEecCCcee--eheeeE--------eeecceeCCCcceeeEEeeEEEEEEcCCc-ceEEE Q lcl|Aclame:pro 81 NAGGEVGRWISLVQVGTELKFFQTTGETL--SEGNFY--------NYQFVNMSPSHKLSYAVVDGLLVVANGSR-DIYVF 149 (771) Q Consensus 81 ~~~g~v~~~~l~~q~g~~l~~~d~t~~~l--Sn~~l~--------~~~fv~~sP~~~is~~~v~G~lVva~~~~-~~~i~ 149 (771) ++||+++++||++|+|+|+|++|++ +|| +|++|+ +++.|++||.| ||+++ |+.||++|++ |++|+ T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~~~~ 156 (911) T protein:vir:31 81 EAWGDKDVNMLIFHAGYKVHVVQDT-APLRDANILLTIDLLEAGIKLDGVIDSPVH-ISVGV--GFAIITNPRIEPVLIK 156 (911) T ss_pred HhhCCCcceEEEEecCcEEEEEecc-cCccccceEEEeeeeccCceeeeeecCcee-EEeec--eEEEeecCccceEEEE Confidence 9999999999999999999999999 999 888886 79999999999 99999 9999999999 99999 Q ss_pred eccCCceeeEEE-----EEEEEEeeeeccccccCcceeccccccCCCccCchhheeeeeccccceeeeeccCCCCcce-- Q lcl|Aclame:pro 150 EYDSGSVSVTTK-----RLLVRDLFGVQDIVNGVDLRQGNDIATRPTVQTNAHIYNLRNQTFGVPRVTWHSNEPSDPI-- 222 (771) Q Consensus 150 ~~~~~s~~~~t~-----~l~iRd~~~l~d~~~g~~~~~~~~~~~rpttlS~eh~YnL~NqgW~~~~~~~~s~s~~~~v-- 222 (771) .++.|+++|+|+ +|+||.|++|.||++|+++ +++|++|++|||||+||+++.++.++||++++| T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (911) T protein:vir:31 157 LDDVDDEGVPTLSYEPLTLLIRTRELLTPYTTGTNY---------GDTLTPEEEWNLYNSGWATITRATKDKSGSGTVYV 227 (911) T ss_pred eeccCccCcccccccceeeEeeehhhcccccccccc---------CcccCchhhcccccccceeeeeecccCCccceEEE Confidence 999999999998 8999999999999999999 999999999999999999999999999999998 Q ss_pred --EEEccccccCCcCcchheeeccccccCCCcccccccchhhhhccccccccCCCcceEEEeeecCcccceeeeeccccc Q lcl|Aclame:pro 223 --VTFRSAASGKFPSNSDSVNLALSKRADVEPSTTDRFRAEDIVLNPIGTYETARGFFIIDAMARGKSRLEEIVKLKQRY 300 (771) Q Consensus 223 --v~~~~~~~G~yPSnaD~~n~~~~~~s~~e~~~~~~F~~~~~~~n~~Gs~~aarG~yI~d~~~~~~s~~~~~~~~~~~~ 300 (771) +|||++++|+||||+..+|+|+ +++.+||.++++|+||+.||+++|+++||.|||||++++++++++++++++++++ T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (911) T protein:vir:31 228 NPVQYYFDKRGVYPSHSVLYNSMK-QESAKEIVALNVFSPWADEKINFGTTTPPLGRYIHSAYYFDSAAILSLGIGNLTP 306 (911) T ss_pred chhheeecccCcCcchhhhhhhhh-hhccceeEEEeeeccccccccccccCCCchhhhhhhheeeccceeeeecccccCC Confidence 8999999999999999999999 9999999999999999999999999999999999999999999999999999999 Q ss_pred ccccceeeec-chhhccCCceeeeeeccee--EEeeecceeecccccCCcccce-----------------eEEEeeecc Q lcl|Aclame:pro 301 PSLSFGVSSL-PQDETPGGASVVCEYAGRV--WYAGFSGQIIDGDDQSPRLVSY-----------------ILFSQLVDS 360 (771) Q Consensus 301 p~~~~~t~~~-p~d~~~g~~t~v~~~aGRv--~y~g~~~~~~~~~~~~p~~~~y-----------------v~fSqli~s 360 (771) |+++++|+|+ |.++|+.||+++.++ |.| .+..++|+|+|.+|+||||++| |+||||++| T Consensus 307 ~~~~~~~~~~~p~~~e~~np~gl~~i-gt~~n~k~~a~~~~~~~~~~r~r~~~~yaGRVfyaD~dkngk~rIlFSqLv~s 385 (911) T protein:vir:31 307 PTSDGTTEGSGPAEEEISNPIGLDNI-GTVNNLKLIAEGTVRWTVKDRPRCSGYHNGHVYFGDRDKNGKTRILVSQLVNS 385 (911) T ss_pred CCCCCccCCCCCchhhhcCCCCcccc-cchhceeeeeccceeeeecccccceeeeccEEEEeeeccCcceeEEEEeeccc Confidence 9999999999 999999999999999 999 6779999999999999999987 999999999 Q ss_pred hhhccccccCCCCcCchhhhhhhcCCCEEeecCCCceeEEEeecceeEEEecceEEEEEecccceeeecceeeeeeeeee Q lcl|Aclame:pro 361 PADIVNCYQDGDPTSTEEPELVDTDGGFIRIEGAHDIINLVNVGSAVMVVAANGIWMIQGGSDYGFTATNYLVTKISEHG 440 (771) Q Consensus 361 ~~~lg~CyQ~~DPts~~~~dl~dtDGG~I~I~ga~~Iv~mv~~~ssLlVft~nGVWal~G~S~~~fsAt~y~V~KISd~G 440 (771) |++++||||++|||++|++||+|||||+|+|+|||+|++||+++++|+|||+||||||+|+++++|+|++|.|+|||++| T Consensus 386 l~di~nCYQdaDPTSeee~DLIdTDGg~vri~gah~Ii~LV~~G~sLlVFcaNGVWAI~G~d~~g~TATdy~ItKIsdvG 465 (911) T protein:vir:31 386 LDNIPKCFQDADPTAEEINDLIATDGFTMYPVGMGAPITMVEFNKRLLLLCTNGVWAIRGTSGGGATATDFTLDKVASVE 465 (911) T ss_pred cccccccccCCCccccccchhhhcCCcEEecCCCCCceEEEEecCeEEEEEeCcEEEEeccCCCceeeeeeEEEEEeeee Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred ecCccceEEeCCeEEEEecCceEEecccccCcccccccCchhhhhhhhhcChhHhcceeEEEEeeccEEEEEeccccccc Q lcl|Aclame:pro 441 CSSPNSVVVVDNSFMYWGDDGIYHLTRNQYGDYVANNLTEKTIQKYYEKIPSDAILNATGFYDSYDKKVKWLYNTVLDGR 520 (771) Q Consensus 441 cvspnSIV~id~aVvYwSDsGI~~L~~ne~g~~ss~nLte~tIqt~~~sip~~~k~~~~g~yD~~~~~v~wly~e~~d~~ 520 (771) |++|||||++|++|+||||+|||+|+.||+||++||||||+|||+||++||.++++|++|+||+++||++|+||++.|.+ T Consensus 466 csspNSVVvVgn~i~fWSd~GIyaLganqfnD~tAnNLTesTIQ~y~d~I~~dkIkNVtgtyd~de~rVyW~yPn~lDe~ 545 (911) T protein:vir:31 466 FNSPQSVVDIGTAIVFWSERGIIAIGVNDFGDLTSNNLTENTIDEYYDSLDRDIIKNVKGTFINDENRVYWVVPNKQDSN 545 (911) T ss_pred eCCCCeEEEecCceEEeeCCcEEEEeecccCccccccccHHHHHHHHhhcChhhhceEEEEEEccCCEEEEEecCccCCc Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred ccccce----eEEecccccceeeeecceeccceeeeeeeeeeCCceeeecceEEeecccceeeccceeeeeeeeeeeeee Q lcl|Aclame:pro 521 TEPVTE----LVFDLALGAFYPSKIGSLTAGRLPIPVGSVKIPPYKLVETGEEVTVASEQVTATGELVTVKVSTRSPVIR 596 (771) Q Consensus 521 ~~y~tE----lVf~L~~~afY~~ki~s~~ags~~~~i~s~~vp~y~~~~t~~~V~v~~~~vv~~~~~v~~~~~~~~~~~r 596 (771) .+|++| |||||++|+||||++ ++|++ +++|+|+++++++||.++...++...+.+.++.|.+..+.+ T Consensus 546 teykt~~~~ILVfdLatgaFYPwtv---s~gpL------l~~p~y~Lv~TreEvtvPi~~etgaiIve~gsdPV~~tl~v 616 (911) T protein:vir:31 546 GEYKTDGELVLVLNLDTGGFYKHTV---SGGPL------LHAPFRRLVNTRAEVSIPITETDGTVITDTLGDPVTVTRTV 616 (911) T ss_pred cceeecCceEEEEEeccCcccceee---eccee------ecccccccccccccceeeEEeecceEEEecCCCCeEEEEee Confidence 999988 999999999999955 67887 89999999999999999888887777777777777766666 Q ss_pred e------eEEEEEEEcCCCceEEEeeecC-CchhhccccCC-cccchhHhhhhhccccccceeeeecceEEEE----Eee Q lcl|Aclame:pro 597 E------TKYIIVEKLSSPMRISFGGYTD-EEFVDWKSVDG-IGVDAPAYLLTGYLAGGDYQREKFVPYITFH----FKK 664 (771) Q Consensus 597 ~------~~y~~~~~~g~~~~~sF~~~~~-d~F~Dw~~~~~-~gvd~~sy~~tgy~~~gd~~r~K~~pyl~~~----~~~ 664 (771) + ..|++.++||++++|+|++.++ +.|+||++||+ |+|||+||+++||++||||+.+|++||+|+| |+. T Consensus 617 dttGvDg~ayLl~frdg~~g~~~f~a~~~~~~~~dw~~~~~~~~~~y~s~~~~~y~~~~~~~~~~~~pyi~sy~~~~~rv 696 (911) T protein:vir:31 617 TTTGVDGLAYFASFDDGVNGQFNFIAEHQPWGFADWANVPNMTRVNYSSYVDFAYEYPEVMIGNISLPYIHSYYLTGIRV 696 (911) T ss_pred ecccccceeEEEeeccCCcceEEEEEeecCCeeeccccCccccccchhHHHHhhhhhhhhhhhcccCceeeeeeeeeeEE Confidence 6 7888889999999999965555 59999999999 9999999999999999999999999999999 776 Q ss_pred ecceeE-ecccceEEEcC--ccceEEE----------------EEEeecc---------------CCCCCccc------- Q lcl|Aclame:pro 665 TEDGFV-EDAEGDWTPTN--QSSCMVQ----------------SQWSWTN---------------SPASNKWG------- 703 (771) Q Consensus 665 TEd~~t-~d~~g~~~~~n--~SScl~~----------------~~w~~s~---------------~~~~~kw~------- 703 (771) |||+++ +.++.|||+-- |...|-+ +++.=++ -++..-|+ T Consensus 697 ~~~~y~~~~a~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vVNGDAE~GtmTGWtvtaG~~d 776 (911) T protein:vir:31 697 QTEQYTTETAHLSFHRVQAHQTTALGTVTFHKVDMMVSTGMQVISFHKDDLLRTEAVTLVNPDAETGDATGWTVTAGTLD 776 (911) T ss_pred eccceeeecccceeEeeecccceeeeeeeeeeeeehhhccceeeeeccccceeeeeeEEEcCCCCCCCCCcceeeccchh Confidence 666555 88888999853 2222222 2222111 12222342 Q ss_pred --chheeeeeeehcccCCCCc-----CCC-----------CcceeeeeccccceeeeEEEEEEEecCCCceEEEeEEE-E Q lcl|Aclame:pro 704 --RTWQAYRFRRHFFPDNIDN-----QFD-----------DGNSVVETKSRLRGSGKVLSLYITTEPKKNLHIYGWSM-L 764 (771) Q Consensus 704 --~~~q~Yr~~r~~~p~~~~~-----~f~-----------~~~~VV~TK~~~RG~G~~~~~~f~se~~KD~~llG~~~-~ 764 (771) ++...||=.++|-|.+-.. .+| -.++|..-|..-+|++ ||-..+-.+ . T Consensus 777 ~~Ta~p~~rGSyfFa~~nn~n~aL~QDIDSagaaaIDAG~v~ynvSawl~gyAaqn-------------d~Dr~~l~vEf 843 (911) T protein:vir:31 777 VRTAAPLYQGSYYFWSDSNANFAAYQDIDPVGGGYITAGELANNVIEAKLSWAARG-------------NTDLGTVYIEC 843 (911) T ss_pred hccCCchhcceEeEcCCCCcchhhheeccccccceeeeccchhhhhhhhhhhccCC-------------CCccceEEEEE Confidence 3334455444555554221 111 1234444455555543 122212122 3 Q ss_pred EEeecCC Q lcl|Aclame:pro 765 VDVNGTV 771 (771) Q Consensus 765 ~~~~g~~ 771 (771) +|..|+| T Consensus 844 LDAsGTV 850 (911) T protein:vir:31 844 LDAIGTV 850 (911) T ss_pred EeccCce Confidence 6788888 No 4 >protein:vir:8837 Length: 513 # NCBI annotation: constituent protein # Family: family:all:4957 # MgeID: mge:158 # MgeName: PaP3 # Cross-refs: genbank:acc:NP_775245;genbank:gi:27476043;genbank:GeneID:2700591 Probab=100.00 E-value=2.3e-30 Score=183.06 Aligned_cols=504 Identities=13% Similarity=0.156 Sum_probs=287.8 Q ss_pred CchhhhhhhhccccceeeeccchhcCCCCccccceeeeeccccchhhhhcceeecCCceeecceeeccCceeeeeechhh Q lcl|Aclame:pro 1 MAKTTNAAEFNTFVGGLITEASPLTFPQNASIDEVNFILNRDGSRNRRNGMDFENGATKVVCNTLVPADGTIAVTSHNWE 80 (771) Q Consensus 1 Ma~~~~~~e~ntFv~GliTEan~Lt~P~nas~De~N~~L~k~G~r~RR~Gl~~E~s~~~~l~~~~~~s~~~~~vt~~~W~ 80 (771) ||-.+..+ .. .-|.||.-=|-.+|.+|..|..|.....++- +||.|...- +++ |.... +.. .-|. T Consensus 1 ~~~~~~~~--~~-~~g~~~d~~p~~lp~~a~s~~~N~~~~~~~~-~~~~g~~pv-~a~--~~~~~-----~g~---~~~~ 65 (513) T protein:vir:88 1 MALERQEV--KN-PTGIVTDIAPADLPLDKWSFGNNVRFKNGKA-QKALGHSPI-FDT--AQAPI-----LDM---FPFI 65 (513) T ss_pred CCcCChhh--cc-cccceeccChhhcCCCcceeeeeeeEeccee-eecCcccee-eec--CCCCc-----eee---eeee Confidence 77666544 33 6788998888889999999999998876655 888888765 233 12121 222 2344 Q ss_pred hccCccceeEEEEEEccEEEEEecCC-ceeeheeeEeeecceeCCCcceeeEEeeEEEEEEcCCcceEEEeccCCceeeE Q lcl|Aclame:pro 81 NAGGEVGRWISLVQVGTELKFFQTTG-ETLSEGNFYNYQFVNMSPSHKLSYAVVDGLLVVANGSRDIYVFEYDSGSVSVT 159 (771) Q Consensus 81 ~~~g~v~~~~l~~q~g~~l~~~d~t~-~~lSn~~l~~~~fv~~sP~~~is~~~v~G~lVva~~~~~~~i~~~~~~s~~~~ 159 (771) ..+ ...|+++-+ .+++..+.+. ..+|-+- + +-+.+.+.+++...+++|.++|..++++++..+..+. T Consensus 66 ~~g--~~~~~~~~~--~~~~~~~~~t~~dvs~~~---~---~~~~~~~w~~~~f~~~i~a~ng~~~~q~~~~~s~~f~-- 133 (513) T protein:vir:88 66 RNN--IPYWLLCSE--KRLYLADGTTIIDVSPGP---Y---SASVTNRWSVGSFNGVIFANDGVNPPHHLPPTESVFR-- 133 (513) T ss_pred cCC--CeEEEEeec--eEEEEecCceeeeccccc---e---eecccCceeeeeecCEEEEEcCCCcceEEcCCCceee-- Confidence 433 333555544 2343333331 0011111 1 2333457899999999999998777666544322111 Q ss_pred EEEEEEEEeeeeccccccCcceeccccccCCCccCchhheeeeeccccceeeeeccCCCCcceEEEccccccCCcCcchh Q lcl|Aclame:pro 160 TKRLLVRDLFGVQDIVNGVDLRQGNDIATRPTVQTNAHIYNLRNQTFGVPRVTWHSNEPSDPIVTFRSAASGKFPSNSDS 239 (771) Q Consensus 160 t~~l~iRd~~~l~d~~~g~~~~~~~~~~~rpttlS~eh~YnL~NqgW~~~~~~~~s~s~~~~vv~~~~~~~G~yPSnaD~ 239 (771) ++ | | +|+ . T Consensus 134 -------dl---------------------~--------------g---------------------------~p~---~ 141 (513) T protein:vir:88 134 -------VL---------------------P--------------N---------------------------FPA---N 141 (513) T ss_pred -------ec---------------------c--------------C---------------------------CCc---c Confidence 00 1 0 111 0 Q ss_pred eeeccccccCCCcccccccchhhhhccccccccCCCcceEEEeeecCcccceeeeecccccccccceeeecchhhccCCc Q lcl|Aclame:pro 240 VNLALSKRADVEPSTTDRFRAEDIVLNPIGTYETARGFFIIDAMARGKSRLEEIVKLKQRYPSLSFGVSSLPQDETPGGA 319 (771) Q Consensus 240 ~n~~~~~~s~~e~~~~~~F~~~~~~~n~~Gs~~aarG~yI~d~~~~~~s~~~~~~~~~~~~p~~~~~t~~~p~d~~~g~~ 319 (771) | + .| T Consensus 142 ~----------------------------------~------------a~------------------------------ 145 (513) T protein:vir:88 142 T----------------------------------T------------FR------------------------------ 145 (513) T ss_pred c----------------------------------c------------eE------------------------------ Confidence 0 0 00 Q ss_pred eeeeeecceeEEeeec-ceeecccccCCcccceeEEEeeecchhhccccccCCCCcCchhhhhhhcCCCEEeecCCCcee Q lcl|Aclame:pro 320 SVVCEYAGRVWYAGFS-GQIIDGDDQSPRLVSYILFSQLVDSPADIVNCYQDGDPTSTEEPELVDTDGGFIRIEGAHDII 398 (771) Q Consensus 320 t~v~~~aGRv~y~g~~-~~~~~~~~~~p~~~~yv~fSqli~s~~~lg~CyQ~~DPts~~~~dl~dtDGG~I~I~ga~~Iv 398 (771) .|..|.+|||..+.. +. - +.|+ =|++|.+ .|.+.|.+.-|+++..-+ +|.-..+.+.|.|+ T Consensus 146 -~i~v~~~flv~~~~t~~~----~-~~Pn---rV~wS~~----~D~~~~P~~W~~t~~t~~-----a~~~~l~d~~g~~v 207 (513) T protein:vir:88 146 -RLKSFKNFLIGLNVTSNS----I-EMPQ---MVWWSTS----ADAGGVPASWDPTDPTKD-----AGQNTLADTNGAIV 207 (513) T ss_pred -EEEEEeeEEEEeecccCc----C-CCCc---eEEEecc----cCCcccccccccccccCc-----ccccccCCCcccee Confidence 133456777776642 11 0 1122 3778776 577888888888765443 22223345667888 Q ss_pred EEEeecceeEEEecceEEEEE-ecccceeeecceeeeeeeeeeecCccceEEeCCeEEEEecCceEEecccccCcccccc Q lcl|Aclame:pro 399 NLVNVGSAVMVVAANGIWMIQ-GGSDYGFTATNYLVTKISEHGCSSPNSVVVVDNSFMYWGDDGIYHLTRNQYGDYVANN 477 (771) Q Consensus 399 ~mv~~~ssLlVft~nGVWal~-G~S~~~fsAt~y~V~KISd~GcvspnSIV~id~aVvYwSDsGI~~L~~ne~g~~ss~n 477 (771) .+++.+..|+||++++||+++ +++...|... ..+++.||++|+||+++|+.+||++++|||++.+.+.-.| T Consensus 208 ~g~~~g~~liif~e~~i~~m~y~g~~~if~~~----~i~~~~G~~~p~SI~~~~~~~ffls~~Gf~~~~G~~~~~I---- 279 (513) T protein:vir:88 208 DGVKLRDSFIIYKEDSVYSMRYIGGLYIFQFQ----QLFNDVGILGPNCAIEFDGNHFVVGHGDVYVHNGVQKQSV---- 279 (513) T ss_pred eeeecccceEEEecccEEEEEecCCCceEEEE----eecccccccCCceeEEECCeEEEEeCCceEEecCceeeec---- Confidence 899999999999999999997 7777766554 3444599999999999999999999999999988764444 Q ss_pred cCchhhh-hhhhhcChhHhcceeEEEEeeccEEEEEecccccccccccce-eEEecccccceeeeecceeccceeeeeee Q lcl|Aclame:pro 478 LTEKTIQ-KYYEKIPSDAILNATGFYDSYDKKVKWLYNTVLDGRTEPVTE-LVFDLALGAFYPSKIGSLTAGRLPIPVGS 555 (771) Q Consensus 478 Lte~tIq-t~~~sip~~~k~~~~g~yD~~~~~v~wly~e~~d~~~~y~tE-lVf~L~~~afY~~ki~s~~ags~~~~i~s 555 (771) -...++ +.+.+++....-...+.+|..+++|+|+|+......-...++ ||+|..++.|+...+--. T Consensus 280 -g~ekVdk~f~~~~n~~~~~~~~~~~d~~~~~v~~~y~s~~~~~~~~~~~~lVYd~~~~~Ws~~~~p~~----------- 347 (513) T protein:vir:88 280 -IDAQVRKFFFSDINPDNYQRTFVLADHVNTEMWVCYSSTRSEPGKHCDRAIIWNWKENTWSIRDLPNV----------- 347 (513) T ss_pred -ccchhhhhhhccCCcccceEEEEEEcCcccEEEEEecCCCCCCCcccceEEEEEccCCeEEEEeccch----------- Confidence 223454 677888888777788999999999999998422211111123 899999999986654211 Q ss_pred eeeCCceeeecceEEeecccceeeccceeeeeeeeeeeeee-eeEEEEEEEcCCCceEEEeeecCCchhhccccCCcccc Q lcl|Aclame:pro 556 VKIPPYKLVETGEEVTVASEQVTATGELVTVKVSTRSPVIR-ETKYIIVEKLSSPMRISFGGYTDEEFVDWKSVDGIGVD 634 (771) Q Consensus 556 ~~vp~y~~~~t~~~V~v~~~~vv~~~~~v~~~~~~~~~~~r-~~~y~~~~~~g~~~~~sF~~~~~d~F~Dw~~~~~~gvd 634 (771) .+..+......+.+.-.+.. ..-+...+......+-.+ .+.|....-.+..+.| ..+ + ++ +|.+ T Consensus 348 -~~g~~g~~~~~~~~~~~~~~--~~~d~~~~~~~~~~~~~~~~sl~~~~~~~~~~~~f---d~~--~--~f-----~G~~ 412 (513) T protein:vir:88 348 -LSGAYGIIDPKTSNLWDDDS--NPWDTDTSVWGEGSYNPAKSSMIFTSFQDAKLFLF---GET--S--TF-----SGQS 412 (513) T ss_pred -hhcccccccccccceecccc--cccccchhhhhccccccccceeEeeeccCCceeee---ccc--c--cc-----cCCc Confidence 11112222222222111111 011111111111101111 1122222211111111 000 0 01 4566 Q ss_pred hhHhhhhhccccccceeeeecceEEEEEeeecceeEecccceEEEcCccceEEEEEEeeccCCCCCcccchheeeeeeeh Q lcl|Aclame:pro 635 APAYLLTGYLAGGDYQREKFVPYITFHFKKTEDGFVEDAEGDWTPTNQSSCMVQSQWSWTNSPASNKWGRTWQAYRFRRH 714 (771) Q Consensus 635 ~~sy~~tgy~~~gd~~r~K~~pyl~~~~~~TEd~~t~d~~g~~~~~n~SScl~~~~w~~s~~~~~~kw~~~~q~Yr~~r~ 714 (771) +++=+++.+...++.-+.|.+--+-.++ |++| -|.+.+.+ . T Consensus 413 lea~~~t~~~~~~~~~~~~~i~~v~~~~--t~~g---------------~~t~~vg~----------------------~ 453 (513) T protein:vir:88 413 FTSTLERSDIYLGDDRMMKTVSAVIPHI--TGNG---------------VCNIWVGN----------------------A 453 (513) T ss_pred eEEEEEecCccccCchhheeeeeeeeee--ecce---------------EEEEEEee----------------------e Confidence 6666666666666555555554333321 1111 12222222 2 Q ss_pred cccCCCCcCC-C-CcceeeeeccccceeeeEEEEEEEecCCCceEEEeEEEEEEee-cCC Q lcl|Aclame:pro 715 FFPDNIDNQF-D-DGNSVVETKSRLRGSGKVLSLYITTEPKKNLHIYGWSMLVDVN-GTV 771 (771) Q Consensus 715 ~~p~~~~~~f-~-~~~~VV~TK~~~RG~G~~~~~~f~se~~KD~~llG~~~~~~~~-g~~ 771 (771) .+|+.-..-. . ....-.+-|..+|..||-++|||+...+|+.||-|+.+...++ |-= T Consensus 454 ~~~~~~~~~s~~~~~~~~~~~~~~~r~~gRy~~~ri~i~~~~~w~~~G~~ve~~~~~g~R 513 (513) T protein:vir:88 454 QVQGSGIRWKGPYPYRIGQDYKIDTKHVGRYIALKFDFASAGDWYFNGYTLEMAPKAGMR 513 (513) T ss_pred ccCccccccccceeeecccCceEEeccCCceEEEEEEccCCCceEEeeEEEEEecCCCCC Confidence 2222211100 0 1111124677899999999999999999999999999999885 555 No 5 >protein:vir:94602 Length: 1012 # NCBI annotation: PfWMP4_35 # Family: family:all:12083 # MgeID: mge:1525 # MgeName: Pf-WMP4 # Cross-refs: genbank:acc:YP_762665;genbank:gi:115304373;genbank:GeneID:5142302 Probab=99.72 E-value=2.7e-16 Score=105.98 Aligned_cols=699 Identities=18% Similarity=0.221 Sum_probs=334.0 Q ss_pred Cchhhhhhh---hccccceeeeccchhcCCCCccccceeeeeccccchhhhhcceeec------CCceeecceeeccCce Q lcl|Aclame:pro 1 MAKTTNAAE---FNTFVGGLITEASPLTFPQNASIDEVNFILNRDGSRNRRNGMDFEN------GATKVVCNTLVPADGT 71 (771) Q Consensus 1 Ma~~~~~~e---~ntFv~GliTEan~Lt~P~nas~De~N~~L~k~G~r~RR~Gl~~E~------s~~~~l~~~~~~s~~~ 71 (771) |.+|++.-- +-.=.+||.+-+++++-|-.-|-.-.||+..-+|.--||.|-.+-. -.+.+++..+-.-- T Consensus 1 mtqQQ~~eiqG~~t~~F~GL~~s~S~~~IP~~~SP~~~N~DV~~~G~V~rR~GT~l~~~Y~inn~s~~~~s~~irt~L-- 78 (1012) T protein:vir:94 1 MTQQQATEIQGPFTREFSGLDISNSVGAIPVSGSPVFHNCDVSDDGAVVRRRGTALVNTYNINNASGRAWSDTIRTKL-- 78 (1012) T ss_pred CCccccccccccccccccccccccccccccccCCCceEEeecccCcceeehhhhhhhhhhcccccCcceeeeeehhhc-- Confidence 988876422 3334589999999999999999999999999999999999865533 11112211111100 Q ss_pred eeeeechhhhccCccceeEEEEEEccEEEEEecCCceeehe----------eeE-----eeecceeCCCc-ceeeEEeeE Q lcl|Aclame:pro 72 IAVTSHNWENAGGEVGRWISLVQVGTELKFFQTTGETLSEG----------NFY-----NYQFVNMSPSH-KLSYAVVDG 135 (771) Q Consensus 72 ~~vt~~~W~~~~g~v~~~~l~~q~g~~l~~~d~t~~~lSn~----------~l~-----~~~fv~~sP~~-~is~~~v~G 135 (771) -.|.-.---++++-+.++..|.-+-.+ |+.+-++.. -+. --.-++++|.| ++++--|+- T Consensus 79 ----G~eYfiLs~~~GLL~~~~~~~~AVG~~-K~~a~V~~ss~~~V~Pssm~F~~~S~~~~R~LILT~~~~~VQ~~F~E~ 153 (1012) T protein:vir:94 79 ----GSEYFILSNDVGLLISLMRDDEAVGMP-KEVAVVSKSSIWTVPPSSMCFIPVSAPYDRLLILTPEHPIVQLSFLER 153 (1012) T ss_pred ----cceeEEEecCCceEEEeeecccccccc-hhhhhhhhhhccccCCcceEEEeccCCCCcEEEEcCCCceEEEEEeee Confidence 001101111233444444443332221 111222111 111 12235788888 577777766 Q ss_pred EEEEEcCCcc----------------eEEEeccCCceeeEEEEEEEEEeeeeccccccCcceeccccccCCCccCchhh- Q lcl|Aclame:pro 136 LLVVANGSRD----------------IYVFEYDSGSVSVTTKRLLVRDLFGVQDIVNGVDLRQGNDIATRPTVQTNAHI- 198 (771) Q Consensus 136 ~lVva~~~~~----------------~~i~~~~~~s~~~~t~~l~iRd~~~l~d~~~g~~~~~~~~~~~rpttlS~eh~- 198 (771) -|-.+.++-- ++.++-+-+|..++---=-.|-+.--+|.-+ .-++++.....--+|+-..+ T Consensus 154 T~s~T~~t~~~~~V~~~~a~~~~~~~~L~~~~N~sS~~~~~~~~T~~AmT~~NP~~S--~~ls~~~V~~qtytltirqi~ 231 (1012) T protein:vir:94 154 TLSFTCTTNHGGGVFSFTAPISVNDTTLWRDTNASSYIVTDAAGTVYAMTQKNPDFS--FRLSGSFVVGQTYTLTIRQIT 231 (1012) T ss_pred eeeeeccCCccceEeecccceeecCeeEEecccccceeEeeccceEEEEEeeCCcee--EEEEEEEecCcccceeehhhh Confidence 6665555432 3444444444433322111111111111111 01111111111111111100 Q ss_pred ---------------------eee--eeccccceee------eeccCCCCcceEEE---ccccccC-----CcCcchhee Q lcl|Aclame:pro 199 ---------------------YNL--RNQTFGVPRV------TWHSNEPSDPIVTF---RSAASGK-----FPSNSDSVN 241 (771) Q Consensus 199 ---------------------YnL--~NqgW~~~~~------~~~s~s~~~~vv~~---~~~~~G~-----yPSnaD~~n 241 (771) +|. ..|.=+-|.+ ..--++.+=+..-| +++..|- =|-+||.+ T Consensus 232 W~WWAESm~~~G~~~~~~~SRFNV~~~DQ~V~IP~~L~tDiD~v~~~~~~~~l~~~~ss~F~~~~~~~~T~~P~~AD~Y- 310 (1012) T protein:vir:94 232 WQWWAESMYYEGQDMMQNTSRFNVTSIDQNVKIPDRLITDIDPVYKNSQGLGLFVFWSSRFDSNGWAGPTTSPNTADEY- 310 (1012) T ss_pred hhhhhhhHhhhhhHHHhhhhhcccccccccccchhHHhhhhhhhhhccCCccEEEEEeeeecCceeecCCCCCCCcccc- Confidence 000 0011000000 00011111122111 1221121 25566665 Q ss_pred eccccccCCCcccccccchhhhhccc---------------cccccCCCcceEEEeee----cCcccc---ee----eee Q lcl|Aclame:pro 242 LALSKRADVEPSTTDRFRAEDIVLNP---------------IGTYETARGFFIIDAMA----RGKSRL---EE----IVK 295 (771) Q Consensus 242 ~~~~~~s~~e~~~~~~F~~~~~~~n~---------------~Gs~~aarG~yI~d~~~----~~~s~~---~~----~~~ 295 (771) .+ ++-.||.|-.+.+-. .|+-+|++---|+-.++ -|--+. +. -++ T Consensus 311 -G~--------~~G~~~tpp~~~~~A~L~~aPFF~TFG~~~s~TP~P~~~V~iLR~RELRFN~G~GA~~~~L~V~~D~~~ 381 (1012) T protein:vir:94 311 -GF--------SGGGRFTPPSLVPGATLQAAPFFITFGGIYSGTPTPINQVNILRLRELRFNGGTGAKPDDLQVYNDTVE 381 (1012) T ss_pred -cc--------cCCceeccccccccceeeccceEEEeccccCCCCCChhheeeeeeeeeeeccCCCCCCcceEEEEccee Confidence 33 223466666554421 23334443222221111 010000 00 000 Q ss_pred cccc---cccc----------------------------------cceeeecchhhccCCcee-----eeeecceeEEee Q lcl|Aclame:pro 296 LKQR---YPSL----------------------------------SFGVSSLPQDETPGGASV-----VCEYAGRVWYAG 333 (771) Q Consensus 296 ~~~~---~p~~----------------------------------~~~t~~~p~d~~~g~~t~-----v~~~aGRv~y~g 333 (771) +.-+ |.++ -+.|..+|+.. +=+-+| +..-.-|+||+. T Consensus 382 ~t~Nnvpfspsnfqt~atT~~~T~R~~~L~~A~G~~~~~A~Y~A~~GATnnlpana-PL~IS~~sA~s~~~~~R~v~~~~ 460 (1012) T protein:vir:94 382 HTWNNVPFSPSNFQTWATTYTATDRVITLMSAVGDRFNNANYFAILGATNNLPANA-PLHISCLSASSYLGGSRRVWYRN 460 (1012) T ss_pred eeccccccCcccccceeeeeeecceeEEEeeeccccccCcceEEEeecccccccCC-ccccccccceeeeccceeeeeec Confidence 0000 0000 01111112111 111111 111222344432 Q ss_pred --------------------------------------------------------ecceeecccccCCcccceeEEEee Q lcl|Aclame:pro 334 --------------------------------------------------------FSGQIIDGDDQSPRLVSYILFSQL 357 (771) Q Consensus 334 --------------------------------------------------------~~~~~~~~~~~~p~~~~yv~fSql 357 (771) ...++..|.+ |.|| |+ T Consensus 461 ~~T~~~~~~G~Y~r~YGiG~~~~Y~~~~F~~I~TiY~~RLiL~~~s~~~~~~~~S~~GD~~~~G~~-------Y~F~-Qi 532 (1012) T protein:vir:94 461 LPTTGGTLDGCYVRAYGIGKYVDYSKRSFHAIGTIYRDRLILVNPSTATDQLLISEIGDATVPGEF-------YQFM-QI 532 (1012) T ss_pred cccCCceEeeeEEEEEEeeeeeecCCccccceeeeeeeeeEEeccCCCcceEEEeecCCcccCcee-------eeee-ee Confidence 2223333333 5666 88 Q ss_pred ecchhhccccccCCCCcCchhhhhhhcCCCEEeecCCCceeEEEeecceeEEEecceEEEEEecccceeeecceeeeeee Q lcl|Aclame:pro 358 VDSPADIVNCYQDGDPTSTEEPELVDTDGGFIRIEGAHDIINLVNVGSAVMVVAANGIWMIQGGSDYGFTATNYLVTKIS 437 (771) Q Consensus 358 i~s~~~lg~CyQ~~DPts~~~~dl~dtDGG~I~I~ga~~Iv~mv~~~ssLlVft~nGVWal~G~S~~~fsAt~y~V~KIS 437 (771) +|.++.+ +.||++.+++. .+.| +|.++++++++|+|||+...+.++||.. |+--+|.|+.|| T Consensus 533 TD~L~G~-----~tDPF~L~VtS-e~~e----------~iT~~~~WQ~~LFV~T~~~T~~~~GGe~--~~~s~~~VN~vS 594 (1012) T protein:vir:94 533 TDMLQGV-----TTDPFTLNVTS-EGRE----------RITAVTGWQKRLFVFTGSNTYSIEGGEQ--FGESSYAVNLVS 594 (1012) T ss_pred ehhhccC-----cCCceeEEEcc-cccc----------eeeeeeeeceeEEEEeccceEeeccccc--cchhHHHHHhHH Confidence 8999888 89999998887 6667 9999999999999999999999999765 888889999999 Q ss_pred eeeecCccceEEeCCeEEEEecCceEEeccc-ccCcccccccCchhhhhhhhhcChhHhcce-eEEEEeeccEEEEEecc Q lcl|Aclame:pro 438 EHGCSSPNSVVVVDNSFMYWGDDGIYHLTRN-QYGDYVANNLTEKTIQKYYEKIPSDAILNA-TGFYDSYDKKVKWLYNT 515 (771) Q Consensus 438 d~GcvspnSIV~id~aVvYwSDsGI~~L~~n-e~g~~ss~nLte~tIqt~~~sip~~~k~~~-~g~yD~~~~~v~wly~e 515 (771) ..|.+||+|||++|.+|+|.+|.|++.|.+- +.+..-|=..+-+ |..++-.+....--+. -+.||.-.++.++--+. T Consensus 595 t~G~~N~~~VV~T~~~V~Ym~~~G~F~L~~k~~~~~Y~A~ErSvK-IR~~F~~~~~ss~~~~~Wl~~~e~~~~LYi~L~~ 673 (1012) T protein:vir:94 595 TYGAFNQNCVVVTNLTVLYMNKFGLFDLMNKPNTDSYGAFERSVK-IRGLFQNLAGSSGDNLHWLRYNESSNKLYIGLAA 673 (1012) T ss_pred hhcccCcceEEEeeeEEEEeeccceeeccCCccCCcchhhhhhhh-hhhhhhhhccccccceeeeeeccCCceEEEEecC Confidence 9999999999999999999999999999876 3444433222222 3355544444433232 26676666666554441 Q ss_pred c-------cccccccc------------------cee------E----------Eecccccceeee---------ec--- Q lcl|Aclame:pro 516 V-------LDGRTEPV------------------TEL------V----------FDLALGAFYPSK---------IG--- 542 (771) Q Consensus 516 ~-------~d~~~~y~------------------tEl------V----------f~L~~~afY~~k---------i~--- 542 (771) . +++-+|-. -++ + |=..++.||+.- +- T Consensus 674 ~~dT~~~S~~~~~N~~~DSWs~~~s~~~Fq~YP~V~~~~~~t~L~~i~~~~TV~ML~~~~~~YiDFatirthiypF~~Ca 753 (1012) T protein:vir:94 674 EGDTRTTSRNLMLNFTWDSWSTLSSAAPFQMYPAVQLFKYMTWLTNINAPLTVAMLATEMPFYIDFATIRTHIYPFTFCA 753 (1012) T ss_pred CCcchhhhhhhhhhhhhcchhhhhccCCcccchhhhhhhhhhhhhhhcCchhhhhhhhccceeeeeehhcccccceeeec Confidence 1 11111110 000 1 111234455432 10 Q ss_pred -c-----eeccceeeeee---eeeeCCceeeecceEEeecccceeeccceeeeeeeeeeeeeee--eEE-EEEEEcCCC- Q lcl|Aclame:pro 543 -S-----LTAGRLPIPVG---SVKIPPYKLVETGEEVTVASEQVTATGELVTVKVSTRSPVIRE--TKY-IIVEKLSSP- 609 (771) Q Consensus 543 -s-----~~ags~~~~i~---s~~vp~y~~~~t~~~V~v~~~~vv~~~~~v~~~~~~~~~~~r~--~~y-~~~~~~g~~- 609 (771) + +++.|-+|-.- +-.|.+|.++++. +-.+..-.+.+..--+++.-+|. -+| .+|+-+|++ T Consensus 754 G~~~~~Vms~~~GIY~~~~P~tP~I~~~tit~ss-------~~~~k~Yq~~T~~~GT~tLt~~~~~~~~~~~l~LL~~~~ 826 (1012) T protein:vir:94 754 GQRDVSVMSDSRGIYNLPLPVTPGILDYTITASS-------KAGAKTYQRNTASAGTETLTLRNPMMDYADTLELLGGNV 826 (1012) T ss_pred cceeeEEEecCCceEEecccccceeeeeEeeccc-------hhhhheeccccccccceeeeecChhhhcCcEEEEecCCC Confidence 0 11222111100 1112223333222 22222222222222222222332 111 122222222 Q ss_pred --ceEEEeeecCCchhhcccc----------------CC----------------cccchhHhhhhhccccccceeeeec Q lcl|Aclame:pro 610 --MRISFGGYTDEEFVDWKSV----------------DG----------------IGVDAPAYLLTGYLAGGDYQREKFV 655 (771) Q Consensus 610 --~~~sF~~~~~d~F~Dw~~~----------------~~----------------~gvd~~sy~~tgy~~~gd~~r~K~~ 655 (771) -+|+. --++.|.|.-.- -| .|--|.||-.+---.+|-..|-|.+ T Consensus 827 ~~~~~a~--V~~~~~~~~TT~~TV~~N~~~~lQ~T~~~GS~L~~~~~LsqN~~~~~G~~Y~S~Y~SP~F~L~SL~~LKr~ 904 (1012) T protein:vir:94 827 NASQFAM--VMSNGFEPYTTYPTVTYNGVAPLQWTVTGGSGLNNRPILSQNNNCIMGMIYPSVYASPIFDLESLGRLKRL 904 (1012) T ss_pred CccEEEE--EeecccccccccceEEecceeeeeEEEecCCccccccccccCceEEEeecchhhhcchhhhhhhhhhhhhe Confidence 23332 244555554221 11 3455778877777778899999999 Q ss_pred ceEEEEEeeecceeEecccceEEEcCccceEEEEEEeeccCCCCCcccchheeeeeeehcccCCCCcCCCCcce---eee Q lcl|Aclame:pro 656 PYITFHFKKTEDGFVEDAEGDWTPTNQSSCMVQSQWSWTNSPASNKWGRTWQAYRFRRHFFPDNIDNQFDDGNS---VVE 732 (771) Q Consensus 656 pyl~~~~~~TEd~~t~d~~g~~~~~n~SScl~~~~w~~s~~~~~~kw~~~~q~Yr~~r~~~p~~~~~~f~~~~~---VV~ 732 (771) --++.||..|- .....|..+.-=| |++ +-.-.|-+-- -.|....+|.-.+-+--+.|+ ||+ T Consensus 905 K~~~L~~Dttv-----tsqlkynltsgfs---qvs------vlntawvavv--snynenivpavvsyqvgnsyeirrvve 968 (1012) T protein:vir:94 905 KKLHLQMDTTV-----TSQLKYNLTSGFS---QVS------VLNTAWVAVV--SNYNENIVPAVVSYQVGNSYEIRRVVE 968 (1012) T ss_pred eeeeEEeeeee-----eeeeeeehhcccc---eee------eecceeeeee--eccCccccceeeeeecCCceeeeEEEE Confidence 99999998662 1223344332211 110 0111122111 124445566655555445554 677 Q ss_pred eccccceeeeEEEEEEEecCCCceEEEeEEEEEEeecC---C Q lcl|Aclame:pro 733 TKSRLRGSGKVLSLYITTEPKKNLHIYGWSMLVDVNGT---V 771 (771) Q Consensus 733 TK~~~RG~G~~~~~~f~se~~KD~~llG~~~~~~~~g~---~ 771 (771) -..-+.|+|--.||++.+.+..-++|-.|++-+.-.-. | T Consensus 969 lsiplqgygcdyqfyiasvgaeafklaayefdiqpqrdkryv 1010 (1012) T protein:vir:94 969 LSIPLQGYGCDYQFYIASVGAEAFKLAAYEFDIQPQRDKRYV 1010 (1012) T ss_pred EeecccccccceeEeeeeccccceeeeeeeeccccchhhhhc Confidence 78889999999999999999999999999885432111 1 No 6 >protein:vir:103790 Length: 768 # NCBI annotation: hypothetical protein # Family: family:all:780 # MgeID: mge:1645 # MgeName: BcepC6B # Cross-refs: genbank:acc:YP_024932;genbank:gi:48697202;genbank:GeneID:2846114 Probab=99.69 E-value=2.8e-14 Score=94.93 Aligned_cols=662 Identities=13% Similarity=0.130 Sum_probs=285.9 Q ss_pred Cchhhhhhhhccccce-----eeeccchhcCCCCccccceeeeeccccchhhhhcceeecCC-----ceeecceeeccCc Q lcl|Aclame:pro 1 MAKTTNAAEFNTFVGG-----LITEASPLTFPQNASIDEVNFILNRDGSRNRRNGMDFENGA-----TKVVCNTLVPADG 70 (771) Q Consensus 1 Ma~~~~~~e~ntFv~G-----liTEan~Lt~P~nas~De~N~~L~k~G~r~RR~Gl~~E~s~-----~~~l~~~~~~s~~ 70 (771) ||+.... -+.|-.| |.-=...+-||. .-..-+||.....|--+||-|+.+.... ...|.++.--+ T Consensus 1 M~~~~~~--~~~F~~GelsP~l~~r~Dl~ry~~-~~~~~~N~~~~~~gGl~rRpGt~fv~~~~~~~~~~~lipf~~~~-- 75 (768) T protein:vir:10 1 MPKAAPQ--QVSFDAGELSPLLGARVDLAKYPN-GCQVMENFIATVQGPAIRRGGKRFVAATKDSTKQSWLLPFIVAD-- 75 (768) T ss_pred CCcceee--eeeccCceechhhcccchHHHHHH-HHhhhhcceeeecCCceecCchhhhhhhcCCCCCeeEEEEEecC-- Confidence 9975433 4567778 333333344443 3345689999999999999998776411 11233332111 Q ss_pred eeeeeechhhhccCccceeEEEEEEccEEEEEecCCceeeheeeEeeec-------ceeCCCcceeeEEeeEEEEEEcCC Q lcl|Aclame:pro 71 TIAVTSHNWENAGGEVGRWISLVQVGTELKFFQTTGETLSEGNFYNYQF-------VNMSPSHKLSYAVVDGLLVVANGS 143 (771) Q Consensus 71 ~~~vt~~~W~~~~g~v~~~~l~~q~g~~l~~~d~t~~~lSn~~l~~~~f-------v~~sP~~~is~~~v~G~lVva~~~ 143 (771) ..-.+|.+ -+..|+||+..+--+..+....+.. ....|...|.++.+...+.|+++. T Consensus 76 ---------------~~~y~l~f-g~~~irv~~~~g~v~~~~~~~e~~tp~~~~~l~~~~~~~~L~~~q~aD~~~i~~~~ 139 (768) T protein:vir:10 76 ---------------GIAYMLEF-GDHYIRFFVNRGQLVNAGAPVEIATPYALADLTTEDGTFAIRATQSADTMYLFHGG 139 (768) T ss_pred ---------------ccEEEEEE-cCCEEEEEECCcEEEecCeeEEEEcCCCcceeecccccceeEEEeecCEEEEEcCC Confidence 12234444 4666888876533233222211110 011222348899999999999999 Q ss_pred cceEEEeccCCce-eeEEEEEEEEEe----------eeeccccccCcceeccccccCCCccCchhheee---------ee Q lcl|Aclame:pro 144 RDIYVFEYDSGSV-SVTTKRLLVRDL----------FGVQDIVNGVDLRQGNDIATRPTVQTNAHIYNL---------RN 203 (771) Q Consensus 144 ~~~~i~~~~~~s~-~~~t~~l~iRd~----------~~l~d~~~g~~~~~~~~~~~rpttlS~eh~YnL---------~N 203 (771) -+++-+...++.- .... +.+|.- .-++ ..|+..... +-......+.+|.=.+ -. T Consensus 140 ~~p~~l~r~~~~~w~l~~--~~~~~gp~~~~n~~~~vti~--~s~~~~~~T--~tasa~~~~~~~v~~~~~l~~~~~~~~ 213 (768) T protein:vir:10 140 YPTQKLLRTSATTFSLQP--VTFVGGPFAAVNSDNNVRVH--ASAGTGAVT--LVASASVFRPSDVGTLFYLEQEDNSFV 213 (768) T ss_pred cceeEEEEecCCCceeEE--eeecCccccccccceeEEEE--ecccceeEE--EeecCCccchhhcceeeeeeeeccccc Confidence 8765444333321 1111 112211 0011 001100000 0000001111111111 11 Q ss_pred ccccceeeeecc--CCCCcceEEEccccccCCcC--------cchh--eeeccccccCCCcccccccchhhhhcccccc- Q lcl|Aclame:pro 204 QTFGVPRVTWHS--NEPSDPIVTFRSAASGKFPS--------NSDS--VNLALSKRADVEPSTTDRFRAEDIVLNPIGT- 270 (771) Q Consensus 204 qgW~~~~~~~~s--~s~~~~vv~~~~~~~G~yPS--------naD~--~n~~~~~~s~~e~~~~~~F~~~~~~~n~~Gs- 270 (771) .+|......... ...++.+. .....-+.|+. +..- |....+..+ ..|.+ ++.|. T Consensus 214 ~~~~~~~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~-------~~~~~-----~~~~~~ 280 (768) T protein:vir:10 214 KPWVVHQKIGPSELRRVGDRVY-LCTAVGTATPQVTGTETPTHTSGSRWDGTGQDES-------ATDEY-----GSIGAE 280 (768) T ss_pred cccEEEEeeeeEEEEecCCceE-EeeeeccccccccceeccccccCceEEEecCccc-------ccccc-----cccceE Confidence 334221111100 00011110 00000011111 1110 000000000 00100 01111 Q ss_pred --ccCCC-cceEEEeeecCcccceeeee-----cccccccccceeee------cchhhccCCceeeeeecceeEEeeecc Q lcl|Aclame:pro 271 --YETAR-GFFIIDAMARGKSRLEEIVK-----LKQRYPSLSFGVSS------LPQDETPGGASVVCEYAGRVWYAGFSG 336 (771) Q Consensus 271 --~~aar-G~yI~d~~~~~~s~~~~~~~-----~~~~~p~~~~~t~~------~p~d~~~g~~t~v~~~aGRv~y~g~~~ 336 (771) +.... |.-.|..+.-+.. ..-.+. .....|.....+.| .+-+.+.|+|++|+-|-+|++++| T Consensus 281 ~~~~~~~~~~~~i~~~~~~t~-~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~~g~Ps~v~f~q~RL~f~~--- 356 (768) T protein:vir:10 281 WEYQHSGYGTVLITGYTNDQV-VTGTVATNDPADPGMLPNTVVTLTGTYKWARSLFNSTDGFPQMGTFWRNRLCLMR--- 356 (768) T ss_pred EEEEEcCCceEEEEEecCCee-EEeeeeeecCcccccccccccccCCCcccccCCCcCCCCCceEEEEEeeeEEEee--- Confidence 00000 1111111111100 000000 00000111111111 244567789999999999999987 Q ss_pred eeecccccCCcccceeEEEeeecchhhccccccCCCCcCchhhhhhhcCCCEEeecCC--CceeEEEeecceeEEEecce Q lcl|Aclame:pro 337 QIIDGDDQSPRLVSYILFSQLVDSPADIVNCYQDGDPTSTEEPELVDTDGGFIRIEGA--HDIINLVNVGSAVMVVAANG 414 (771) Q Consensus 337 ~~~~~~~~~p~~~~yv~fSqli~s~~~lg~CyQ~~DPts~~~~dl~dtDGG~I~I~ga--~~Iv~mv~~~ssLlVft~nG 414 (771) |. +|++||.=| |.+=-|++ ...+.|+|.-.+.+-+. ..|..|++++ .|+|||..+ T Consensus 357 ---------~~---~v~~Srtgd--------~~nF~~~s--~~~~~DdD~I~~~~ss~~~~~i~~~v~~~-~L~i~T~~~ 413 (768) T protein:vir:10 357 ---------DR---WLAMSVSAD--------FETFKTKD--ADQQTDDSAIVQQLNARQLNKLAWMVESD-SLLIGMTGD 413 (768) T ss_pred ---------CC---EEEEEcccc--------cccccccc--cccccCCccEEEEecCCcceeEEEEeecC-cEEEEecCc Confidence 22 688888622 11112222 23455778777776665 5699999996 799999999 Q ss_pred EEEEEecc-cceeeecceeeeeeeeeeecCccceEEeCCeEEEEecCc--eEEeccc-ccCcccccccCchhhhhhhhhc Q lcl|Aclame:pro 415 IWMIQGGS-DYGFTATNYLVTKISEHGCSSPNSVVVVDNSFMYWGDDG--IYHLTRN-QYGDYVANNLTEKTIQKYYEKI 490 (771) Q Consensus 415 VWal~G~S-~~~fsAt~y~V~KISd~GcvspnSIV~id~aVvYwSDsG--I~~L~~n-e~g~~ss~nLte~tIqt~~~si 490 (771) -|.|+|++ +..+++++..+.++|..||.+ =.=+.+|++++|.+.+| |+.+..+ +...+.++.||.. ++.+++.+ T Consensus 414 q~~l~~~~~~~~lTP~~~~i~~~s~~g~~~-~~Pv~vG~~v~fv~~~g~~vre~~y~~~~d~y~a~DlT~~-a~hl~~~~ 491 (768) T protein:vir:10 414 EWVIGPANASQPVSAANLNAARRTSYGSKR-IQPVQVGGTIMFVQKAGRKLRDFKYDFSSDNYVSTDVTKI-ADHITRGR 491 (768) T ss_pred eEEEecCCCCcccccceEEEEEeehhcccc-cccEEeCCeEEEEcCCCCEEEEEEeeeecCceecchhhhh-hhhhcccc Confidence 99999976 558999999999999999943 34478999999999999 7767777 4666778888865 44444544 Q ss_pred ChhHhcceeEEEEeeccEEEEEecccccccccccceeEEec---ccccceeeeecceeccceeeeeeeeeeCCceeeecc Q lcl|Aclame:pro 491 PSDAILNATGFYDSYDKKVKWLYNTVLDGRTEPVTELVFDL---ALGAFYPSKIGSLTAGRLPIPVGSVKIPPYKLVETG 567 (771) Q Consensus 491 p~~~k~~~~g~yD~~~~~v~wly~e~~d~~~~y~tElVf~L---~~~afY~~ki~s~~ags~~~~i~s~~vp~y~~~~t~ 567 (771) +.....-....|-....++.|+..+ | +..+.=.+.-+. +-.||.+|.+- .| ....|.+ +|.-.-..+. T Consensus 492 ~~~~~~i~~~a~~~~p~~v~~~v~~--d-g~l~~~ty~~e~~~q~v~aW~~~~~~---~g-~v~~v~~--i~~~~g~~d~ 562 (768) T protein:vir:10 492 AGTNSGIMSLCFQQEPHSVVWAARA--D-GQLIGCTYDEEAGRSDVYGWHRHPDA---NG-FVECVAS--MPAPDGASDD 562 (768) T ss_pred CccccceeeEEEeecCCeEEEEEec--C-CeEEEEEEecCCCceeEEeEEEEEcC---CC-EEEEEEE--EecCCCCccE Confidence 3211111113444567888898753 2 222221122221 22389999662 22 2333333 3321110000 Q ss_pred eEEee----cccceeeccceeeeeeeeeeeeeeeeEEEEEEEcCCCceEEEeeecCCchhhccccCC-c---------cc Q lcl|Aclame:pro 568 EEVTV----ASEQVTATGELVTVKVSTRSPVIRETKYIIVEKLSSPMRISFGGYTDEEFVDWKSVDG-I---------GV 633 (771) Q Consensus 568 ~~V~v----~~~~vv~~~~~v~~~~~~~~~~~r~~~y~~~~~~g~~~~~sF~~~~~d~F~Dw~~~~~-~---------gv 633 (771) --+-| ++..+-- ..-+....+..... +..+..|-+ ..|++..-.+|...+. . |. T Consensus 563 l~~~v~r~~~g~~~~~---ie~l~~~~~~~~~~--~~~~~~D~~-------~~~~~~~~~~~~gl~~leg~~v~v~~dG~ 630 (768) T protein:vir:10 563 LWVIVRRQVNGQTVRY---VEYLNPALQDDEPQ--SSAFYVDAG-------ITYNGVPTSTIAGLGHLEGVTVAVLTDGA 630 (768) T ss_pred EEEEEEecCCCeEEEE---EEecCccccccccc--ccceEeccc-------cccCCcceeeecCCCCcccceEEEEECCE Confidence 00000 0000000 00000000000000 000111111 1122221112211111 0 11 Q ss_pred chhHhhhhhccccccceeee-------ecceEEEE------EeeecceeEecccceEEEcCccceEEEEEEeeccCCCCC Q lcl|Aclame:pro 634 DAPAYLLTGYLAGGDYQREK-------FVPYITFH------FKKTEDGFVEDAEGDWTPTNQSSCMVQSQWSWTNSPASN 700 (771) Q Consensus 634 d~~sy~~tgy~~~gd~~r~K-------~~pyl~~~------~~~TEd~~t~d~~g~~~~~n~SScl~~~~w~~s~~~~~~ 700 (771) .++..... .|-+.-.. -.||. +. +.++++|-+..+. .+ +-++...+-++.. . T Consensus 631 ~~~~~~v~----~g~itl~~~~~~v~vG~~y~-s~~~~~p~~~~~~~gs~~~~~---~r------i~r~~v~~~~S~~-~ 695 (768) T protein:vir:10 631 VHPSRTVT----AGAITLDWSASIVHIGVPTT-CRIQTMQLNAGAANGTAQGKT---KR------VTNIATRFSRSLG-G 695 (768) T ss_pred eccCceec----CCEEEeCCCCceEEEeEeee-EEEEecceEeecCCccccccc---eE------EEEEEEEEecccc-e Confidence 11111100 00010000 01111 11 1133343332211 11 1222233333322 3 Q ss_pred cccc-----hheeeeeeehcccCCCCcCCCCcceeeeeccccceee-eEEEEEEEecCCCceEEEeEEEEEEeecCC Q lcl|Aclame:pro 701 KWGR-----TWQAYRFRRHFFPDNIDNQFDDGNSVVETKSRLRGSG-KVLSLYITTEPKKNLHIYGWSMLVDVNGTV 771 (771) Q Consensus 701 kw~~-----~~q~Yr~~r~~~p~~~~~~f~~~~~VV~TK~~~RG~G-~~~~~~f~se~~KD~~llG~~~~~~~~g~~ 771 (771) +++. ..+-|.+|+--.+.+-+.+...|. + +-.++|.- +-.+|.++++.-..|+||+-...+++|=.= T Consensus 696 ~~~~~~~~~~~~~~~~r~~~~~~~~~~~l~TG~--~--~v~~~~~~~~~~~i~i~~d~P~P~tvlsi~~~~~~nd~~ 768 (768) T protein:vir:10 696 VVGPTFDDNDLEQLSFRKPSNAMDRAVPLFDGD--M--ESDWRGGYEGQSWICYQNDQPLPVTLLGFFPILDTQDDR 768 (768) T ss_pred EEEecCCCCCceeeeeEecCcccCccCCcccCE--E--EEEecCCCCcceEEEEEECCCCCEEEEEEEEEEEEeecC Confidence 3422 234445544211222222212221 2 12334542 446899999999999999999999987766 No 7 >protein:vir:80177 Length: 1027 # NCBI annotation: tail tubular protein B # Family: family:all:12083 # MgeID: mge:1878 # MgeName: Pf-WMP3 # Cross-refs: genbank:acc:YP_001285795;genbank:gi:148747829;genbank:GeneID:5220453 Probab=99.69 E-value=7.8e-16 Score=103.42 Aligned_cols=709 Identities=20% Similarity=0.236 Sum_probs=343.9 Q ss_pred Cchhhhhhhhcc----ccceeeeccchhcCCCCccccceeeeeccccchhhhhcceeecC---CceeecceeeccCceee Q lcl|Aclame:pro 1 MAKTTNAAEFNT----FVGGLITEASPLTFPQNASIDEVNFILNRDGSRNRRNGMDFENG---ATKVVCNTLVPADGTIA 73 (771) Q Consensus 1 Ma~~~~~~e~nt----Fv~GliTEan~Lt~P~nas~De~N~~L~k~G~r~RR~Gl~~E~s---~~~~l~~~~~~s~~~~~ 73 (771) ..++.++.+-.+ =.+||.|-++|++-|-.-|-.-+||+..-+|.--||.|-.+-.- .+.+++..+-.--+ T Consensus 5 ferrtQQ~~dlG~~s~~F~GL~~t~S~~~IP~~~SP~~~N~DV~~~G~V~kR~GT~i~~~Y~~t~~~~t~~vks~LG--- 81 (1027) T protein:vir:80 5 FERRTQQGDDLGIRSSNFGGLNTTASPLNIPYEDSPNLLNVDVDVSGNVSKRQGTEILLKYANTTPVYTFPVKSVLG--- 81 (1027) T ss_pred hhhhhccccccccccccccccccccccccccccCCCceEEeecccCcceeehhhhhhhhhhccCCceeeeeehhhcc--- Confidence 233333333222 25799999999999999999999999999999999988654320 11111111100000 Q ss_pred eeechhhhccCccceeEEEEEEccEEEEEecCCceeeheee------E------eeecceeCCCc-ceeeEEeeEEEEEE Q lcl|Aclame:pro 74 VTSHNWENAGGEVGRWISLVQVGTELKFFQTTGETLSEGNF------Y------NYQFVNMSPSH-KLSYAVVDGLLVVA 140 (771) Q Consensus 74 vt~~~W~~~~g~v~~~~l~~q~g~~l~~~d~t~~~lSn~~l------~------~~~fv~~sP~~-~is~~~v~G~lVva 140 (771) .|. .---.+++-+.++..|.-+-.+ |+.+-++..-. + --.-++++|+| ++++--|+--|-.+ T Consensus 82 ---~dY-vLt~~~GLL~~~~~~~~AVG~~-K~~s~V~~aa~~~V~P~F~~~S~~~~R~LILT~~~~~VQ~~F~E~T~t~T 156 (1027) T protein:vir:80 82 ---YDY-VLTKSGGLLEVAGVIGKAVGAY-KSFSNVFSAAAANVKPYFTLLSDVEPRVLILTGTNTPVQVKFVEQTFTTT 156 (1027) T ss_pred ---cee-eEecCCceEEEeeecccccccc-hhhhhhhhhhhcccCceeEEccCCCCcEEEEcCCCceEEEEEeeeeeeee Confidence 000 0001122223333222222111 11111110000 0 01223556665 45555554444333 Q ss_pred cCCc----------------ceEEEeccCCceeeEEE-----EEEEEE-------------------------------- Q lcl|Aclame:pro 141 NGSR----------------DIYVFEYDSGSVSVTTK-----RLLVRD-------------------------------- 167 (771) Q Consensus 141 ~~~~----------------~~~i~~~~~~s~~~~t~-----~l~iRd-------------------------------- 167 (771) .++- +++.+.-+-.|..++-- -+-|+. T Consensus 157 ~~s~~~~~V~~~~s~~~~~~~~L~~~~N~tS~~~~~~~~T~~AlT~~NlP~~S~~mt~~~V~~~W~WWAESl~~~G~~~~ 236 (1027) T protein:vir:80 157 SGSPTTTVVIPNASRFQYDTPILYMNRNFTSGATYSYNSTTRALTISNLPSWSGSMTFDLVLPVWSWWAESLRWFGDRFY 236 (1027) T ss_pred ccCCccceEeecccceeecCeeEEecccccceeEeeccceEEEEEeccCCcceeEEEEeEEecchhhhhhHHhhhhhHHH Confidence 3321 23344444333332211 111111 Q ss_pred ----eeeec-----------------cc---------------------cc----------------cCcce-------e Q lcl|Aclame:pro 168 ----LFGVQ-----------------DI---------------------VN----------------GVDLR-------Q 182 (771) Q Consensus 168 ----~~~l~-----------------d~---------------------~~----------------g~~~~-------~ 182 (771) ||.++ ++ +- |.-+. + T Consensus 237 ~~~SRFNV~~~DQ~V~IP~~L~sDlD~i~~~~~~~~m~~~~ta~F~~~~~~~~T~~P~~AD~YG~~~G~~~~~~~~A~L~ 316 (1027) T protein:vir:80 237 DAVSRFNVNKADQSVAIPAALRSDLDTIQGTYGRYPMLLYKTATFNDTYTFSNTGQPANADSYGWGDGSVYNVGASAYLN 316 (1027) T ss_pred hhhhhcccccccccccchhHHhhhhhhhhhccCCccEEEEEeeeecCceeecCCCCCCCcccccccCCceEeecccceee Confidence 01000 00 00 00000 0 Q ss_pred ccc--------cccCCCccCchhheeeeeccccceeeeeccCCCCcce-EEEc-cccccCCcCcch----heeecccccc Q lcl|Aclame:pro 183 GND--------IATRPTVQTNAHIYNLRNQTFGVPRVTWHSNEPSDPI-VTFR-SAASGKFPSNSD----SVNLALSKRA 248 (771) Q Consensus 183 ~~~--------~~~rpttlS~eh~YnL~NqgW~~~~~~~~s~s~~~~v-v~~~-~~~~G~yPSnaD----~~n~~~~~~s 248 (771) ++. +-.-|+..-+-|+-.+|--.+-.+.+|. ++.. |+-. .+.+--|-|-.- .+.|++ +. T Consensus 317 ~sPFF~TFG~~~t~TP~P~~~V~lLR~RELRFN~G~GA~-----~~~L~V~~D~~~~s~N~ssT~~~T~R~~~L~~--A~ 389 (1027) T protein:vir:80 317 TSPFFATFGDTRTPTPQPPETVHLLRQRELRFNYGNGAT-----GANLRVTVDGTALSANYSSTVAGTNRAYALYK--AD 389 (1027) T ss_pred ccceEEEeccccCCCCCchhheeeeeeeeeeeccCCCCC-----CcceEEEEcceeeeeeeeeeeeecceeEEEee--ec Confidence 000 0112222233355555544443333322 1111 1000 000111111110 111121 10 Q ss_pred CCCcccccccc-hh-------hhhccccccccCCC-------cceEEEeeecCcc--------cceeeeecccccccccc Q lcl|Aclame:pro 249 DVEPSTTDRFR-AE-------DIVLNPIGTYETAR-------GFFIIDAMARGKS--------RLEEIVKLKQRYPSLSF 305 (771) Q Consensus 249 ~~e~~~~~~F~-~~-------~~~~n~~Gs~~aar-------G~yI~d~~~~~~s--------~~~~~~~~~~~~p~~~~ 305 (771) + .+|. +. .+-+-|+|-.-.+- -+||-.+-.---. +.--|++ .-+|-.-++ T Consensus 390 G------~~~~~A~dlayY~A~~GATPL~IS~~aA~t~~~~~R~yi~~~~~~T~~~~~~G~Y~k~YGlG~-~~~Y~~~~F 462 (1027) T protein:vir:80 390 G------TLCTSASDLAYYIAFTGATPLGISPTAAVTITNVDRTYIGSAATQTDNAYVQGGYFKVYGLGL-WANYGTGQF 462 (1027) T ss_pred c------ccccccccceeeeeeeccccccccccceeeeecCceeeeeeeccccCCceEeeeEEEEEEeee-eeecCCccc Confidence 0 0110 11 12223333222111 1222111000000 0001222 223322222 Q ss_pred eeeec-ch-hhccCCceeeeeecceeEEeeecceeecccccCCcccceeEEEeeecchhhccccccCCCCcCchhhhhhh Q lcl|Aclame:pro 306 GVSSL-PQ-DETPGGASVVCEYAGRVWYAGFSGQIIDGDDQSPRLVSYILFSQLVDSPADIVNCYQDGDPTSTEEPELVD 383 (771) Q Consensus 306 ~t~~~-p~-d~~~g~~t~v~~~aGRv~y~g~~~~~~~~~~~~p~~~~yv~fSqli~s~~~lg~CyQ~~DPts~~~~dl~d 383 (771) .--|- =+ -.--++|+. .--||++|....++.+|++ |.|| |++|.++.+ +.||++.+++...+ T Consensus 463 ~~I~TvY~~RLvL~~~t~---~~~~~~~S~~GD~~~~G~~-------Y~F~-QvTD~L~G~-----~sDPF~L~VsSsq~ 526 (1027) T protein:vir:80 463 PRIATVYQSRLVLGGFTN---DPTRVVFSATGDTVEGGVK-------YNFF-QVTDDLDGL-----DSDPFDLVVSSSQA 526 (1027) T ss_pred cceeeeeeeeeEEeccCC---CcceEEEeecCCcccCcee-------eeee-eeehhhccC-----cCCceeEEEecccc Confidence 11111 11 112244432 3358899999999999999 9999 999999999 99999999999999 Q ss_pred cCCCEEeecCCCceeEEEeecceeEEEecceEEEEEecccceeeecceeeeeeeeeeecCccceEEeCCeEEEEecCceE Q lcl|Aclame:pro 384 TDGGFIRIEGAHDIINLVNVGSAVMVVAANGIWMIQGGSDYGFTATNYLVTKISEHGCSSPNSVVVVDNSFMYWGDDGIY 463 (771) Q Consensus 384 tDGG~I~I~ga~~Iv~mv~~~ssLlVft~nGVWal~G~S~~~fsAt~y~V~KISd~GcvspnSIV~id~aVvYwSDsGI~ 463 (771) .| +|.++++++++|+|||+...+.++||.. -|+--.|.|+.||..|.+||+|||++|.+|+|++|.|++ T Consensus 527 ~d----------~vT~~~~WQ~~LFV~T~~~T~~~~GGd~-t~~~a~~~VN~iSs~G~~N~~~VV~T~~~V~Yl~~~G~F 595 (1027) T protein:vir:80 527 DD----------YVTGLVEWQSSLFVLTRRATFRANGGDA-TISPARRFVNYISSLGLVNPFSVVRTDTAVFYLSDSGVF 595 (1027) T ss_pred cc----------eeeeeeeeceeEEEEecceeEEeecCcc-ccchhHHHHHHHHhhcccCcceEEEeeeEEEEeecccee Confidence 99 9999999999999999999999999766 577778999999999999999999999999999999999 Q ss_pred Eeccc-ccCcccccccCchhhhhhhhhcChhHhcce-eEEEEeeccEEEEEecc-------ccccccccc---------- Q lcl|Aclame:pro 464 HLTRN-QYGDYVANNLTEKTIQKYYEKIPSDAILNA-TGFYDSYDKKVKWLYNT-------VLDGRTEPV---------- 524 (771) Q Consensus 464 ~L~~n-e~g~~ss~nLte~tIqt~~~sip~~~k~~~-~g~yD~~~~~v~wly~e-------~~d~~~~y~---------- 524 (771) .|.+- +.+..-|=..+-+ |...+-.+....--++ -+.||.-.++.++--+. ++++-+|-. T Consensus 596 ~L~~r~~~~~Y~A~EkSiK-IR~~F~~~~~ta~~~~~Wm~~~q~~~~LYv~L~~~~eT~~~S~~~~~N~~~DSWt~~~t~ 674 (1027) T protein:vir:80 596 NLTPRVEDGEYQAIEKSIK-IRKVFGKTTSTAVSSAAWMSFDQNRKVLYVALPRGSETTVASALYVYNTFRDSWTQYDTL 674 (1027) T ss_pred eccCCccCCcchhhhhhhh-hhhhhhhhccccccceeeeeeccCCceEEEEecCCCcchhhhhhhhhhhhhcchhhhhcc Confidence 99886 4444433222222 3355544444433222 36676666666554431 112111110 Q ss_pred -----------ceeE------Ee----------cccccceeeee---cc-----eeccceeee-----eeeeeeCCceee Q lcl|Aclame:pro 525 -----------TELV------FD----------LALGAFYPSKI---GS-----LTAGRLPIP-----VGSVKIPPYKLV 564 (771) Q Consensus 525 -----------tElV------f~----------L~~~afY~~ki---~s-----~~ags~~~~-----i~s~~vp~y~~~ 564 (771) -++| .+ .-++.||+.-+ .+ +++.|-+|- -++-.|.+|.++ T Consensus 675 ~~Fk~YtghP~V~~~~~~s~L~~v~~~~TV~ML~~~~~~YvDFF~~CG~~~~~Vlt~~~GIY~~~~P~wnsP~I~~~svs 754 (1027) T protein:vir:80 675 GGFKTYTGHPYVDTVLGDSFLLMVAYGGTVCMLKLYGSRYVDFFNKCGSFTGNVLTANSGIYTWTAPFWNSPVISNISVS 754 (1027) T ss_pred cCcccccCCchhhhhhhhhhhhhhcCchhhhhhhhhcchhhhhhhhcccceeeEEecCCceeEeecccccCCeeeEEEee Confidence 0011 11 12344554322 11 233333221 122233445555 Q ss_pred ecceE----Eeeccc-ceeeccceeeee---eeeeeeeeee------eEEEEEEEcCCCceEEEe-------eecCCchh Q lcl|Aclame:pro 565 ETGEE----VTVASE-QVTATGELVTVK---VSTRSPVIRE------TKYIIVEKLSSPMRISFG-------GYTDEEFV 623 (771) Q Consensus 565 ~t~~~----V~v~~~-~vv~~~~~v~~~---~~~~~~~~r~------~~y~~~~~~g~~~~~sF~-------~~~~d~F~ 623 (771) .+.+. -+.+-+ +||.-...-++. --++ .-+|. -..-+|-+-+.--+|+.. +|-++.|. T Consensus 755 ~tt~~~~q~Ye~~T~~~vvpydnvedlsiyvnGT~-Ls~~~~~~~~~~~i~LL~~~~~~~~~s~Vprcpvnvsy~~~~~~ 833 (1027) T protein:vir:80 755 GTTTLAVQRYELPTDLQVVPYDNVEDLSIYVNGTR-LSFGTDWVKQGKAIYLLSDPGDGKTVSIVPRCPVNVSYQGDVTF 833 (1027) T ss_pred ccchhhhheeccccccccccccccccceeeeccee-EeecCchhhcCCEEEEecCCCCcceEEEEecccccccccccccc Confidence 44331 000100 000000000000 0011 11221 111223333444456654 66777776 Q ss_pred hccccC------------------C---------------cccchhHhhhhhccccccceeeeecceEEEEEeeeccee- Q lcl|Aclame:pro 624 DWKSVD------------------G---------------IGVDAPAYLLTGYLAGGDYQREKFVPYITFHFKKTEDGF- 669 (771) Q Consensus 624 Dw~~~~------------------~---------------~gvd~~sy~~tgy~~~gd~~r~K~~pyl~~~~~~TEd~~- 669 (771) |.-.-+ | .|--|.||-++---.+|-..|-|.+--++.||.. ||-. T Consensus 834 ~~TT~~TV~~N~~~~iQ~Tdy~~~GS~L~~~~~LtN~~~~~G~~Y~S~Y~SP~F~L~SL~~LKk~K~~~L~~Dn-edvlp 912 (1027) T protein:vir:80 834 DETTAQTVWVNNLLQIQGTDYTLSGSTLTFTDTLTNAVVEVGNAYISYYQSPMFLLGSLSNLKKVKHVYLYFDN-EDVLP 912 (1027) T ss_pred cccccceEEecceeeeccceeeeccCccccccccccceEEEeecchhhhcchhhhhhhhhhhhheeeeEEEEcC-Cccee Confidence 653321 1 2445778877777778899999999999999973 2321 Q ss_pred ------------EecccceEE-EcCccceEEEEEEeeccCCCCCcccchheeeeeeehcccCCCCcCCCCcceeee---- Q lcl|Aclame:pro 670 ------------VEDAEGDWT-PTNQSSCMVQSQWSWTNSPASNKWGRTWQAYRFRRHFFPDNIDNQFDDGNSVVE---- 732 (771) Q Consensus 670 ------------t~d~~g~~~-~~n~SScl~~~~w~~s~~~~~~kw~~~~q~Yr~~r~~~p~~~~~~f~~~~~VV~---- 732 (771) ++|--|.|. +.| .-..+..|=.|...+ ..+||.|.+..- ++--++-| |-..-. T Consensus 913 vytigdlasgqdvddlvgkwktran---anisvtydsentset-----sydiysfsdlvw-dnaffdvd-ptnlqstrya 982 (1027) T protein:vir:80 913 VYTIGDLASGQDVDDLVGKWKTRAN---ANISVTYDSENTSET-----SYDIYSFSDLVW-DNAFFDVD-PTNLQSTRYA 982 (1027) T ss_pred eeeeccccCCCchhHhhhhhccccc---ceeEEEecCcCcccc-----eeeeeehhhhhc-ccceeccc-ccccchhhHH Confidence 122223332 222 123344444443333 348888876322 22112212 222222 Q ss_pred -eccccceeeeEEEEEEEecCCCceEEEeEEEEEEeecCC Q lcl|Aclame:pro 733 -TKSRLRGSGKVLSLYITTEPKKNLHIYGWSMLVDVNGTV 771 (771) Q Consensus 733 -TK~~~RG~G~~~~~~f~se~~KD~~llG~~~~~~~~g~~ 771 (771) -|+.+-|-|--.|+-.-+-.....+|.||.|--+++|.- T Consensus 983 lfkeallgvgynyqigvwsfdeaswklcgyqvdarlsgkr 1022 (1027) T protein:vir:80 983 LFKEALLGVGYNYQIGVWSFDEASWKLCGYQVDARLSGKR 1022 (1027) T ss_pred hhhhhHhhcccceeeeeeeecccceeeeeeeeeeeecccc Confidence 378889999999998888888889999999999999987 No 8 >protein:vir:102644 Length: 594 # NCBI annotation: Hypothetical protein # Family: family:all:780 # MgeID: mge:1624 # MgeName: VP2 # Cross-refs: genbank:acc:YP_024422;genbank:gi:48696643;genbank:GeneID:2948111 Probab=99.68 E-value=7.2e-15 Score=98.13 Aligned_cols=545 Identities=13% Similarity=0.093 Sum_probs=250.0 Q ss_pred CchhhhhhhhccccceeeeccchhcCC-------CCccccceeeeeccccchhhhhcceeecCC-----ceeecceeecc Q lcl|Aclame:pro 1 MAKTTNAAEFNTFVGGLITEASPLTFP-------QNASIDEVNFILNRDGSRNRRNGMDFENGA-----TKVVCNTLVPA 68 (771) Q Consensus 1 Ma~~~~~~e~ntFv~GliTEan~Lt~P-------~nas~De~N~~L~k~G~r~RR~Gl~~E~s~-----~~~l~~~~~~s 68 (771) ||.- --+.|-.| |-+|+-++ +++...-+||++...|--.||-|+-+--.. -..|.++...+ T Consensus 1 m~~~----~~~~F~~G---elsP~l~~r~Dl~~y~~~~~~~~n~~~~~~G~~~rR~G~~~~~~~~~~~~~~~lipF~~s~ 73 (594) T protein:vir:10 1 MADF----SQTSFKGG---VIAPRLQFNEYESAYHHSIEDAVNFVVTEQGSLITRCGSEEVGLCQDGEVRLFRLPAVDAP 73 (594) T ss_pred Ccee----eccccCcc---eecceeccchhHHHHHHHHhhhhceEEEecCCeecCChhHhhhhccCCCCCEEEEEEEeCC Confidence 8873 36788888 55666554 345667899999999999999988763311 13566666555 Q ss_pred CceeeeeechhhhccCccceeEEEEEEccEEEEEecCCceeeheeeEeeecceeCCC-cceeeEEeeEEEEEEcCCcceE Q lcl|Aclame:pro 69 DGTIAVTSHNWENAGGEVGRWISLVQVGTELKFFQTTGETLSEGNFYNYQFVNMSPS-HKLSYAVVDGLLVVANGSRDIY 147 (771) Q Consensus 69 ~~~~~vt~~~W~~~~g~v~~~~l~~q~g~~l~~~d~t~~~lSn~~l~~~~fv~~sP~-~~is~~~v~G~lVva~~~~~~~ 147 (771) .+.+++.. |... +-+...+- ..+...+..|.+.---+. ....+. ..|+++-..+.+.++-+.-+ T Consensus 74 ~~~~~le~-------g~~~--~r~~~~~~-~~v~~~~~~~~~~~tp~~---~t~~~~l~~i~~tqsad~~~~~~~~~~-- 138 (594) T protein:vir:10 74 SNDVIVEV-------GNTN--IAVWVNDV-RQVVANTPSEWRNTIDRI---QTAYDTIGDDAGAANTGRLIMVHPALQ-- 138 (594) T ss_pred CCeEEEEE-------cCCe--EEEEecCc-EEEEccCCCcccccccce---eeccCCccceEEEEEeeEEEEEcCCCC-- Confidence 55554421 1111 00001110 000011111111000000 000000 01222222222111111110 Q ss_pred EEeccCCceeeEEEEEEEEEeeeeccccccCcceeccccccCCCccCchhheeeeeccccceeeeeccCCCCcceEEEcc Q lcl|Aclame:pro 148 VFEYDSGSVSVTTKRLLVRDLFGVQDIVNGVDLRQGNDIATRPTVQTNAHIYNLRNQTFGVPRVTWHSNEPSDPIVTFRS 227 (771) Q Consensus 148 i~~~~~~s~~~~t~~l~iRd~~~l~d~~~g~~~~~~~~~~~rpttlS~eh~YnL~NqgW~~~~~~~~s~s~~~~vv~~~~ 227 (771) +.++|..-+.-|.....++ T Consensus 139 -----------------------------------------------p~~L~R~~~~~w~~~~~~~-------------- 157 (594) T protein:vir:10 139 -----------------------------------------------PKRLYRDNNNAWQFVNMHT-------------- 157 (594) T ss_pred -----------------------------------------------ceEEEEccCCCceEEeccc-------------- Confidence 1122222222231110000 Q ss_pred ccccCCcCcchheeeccccccCCCcccccccchhhhhccccccccCCCcceEEEeeecCcccceeeeeccccccccccee Q lcl|Aclame:pro 228 AASGKFPSNSDSVNLALSKRADVEPSTTDRFRAEDIVLNPIGTYETARGFFIIDAMARGKSRLEEIVKLKQRYPSLSFGV 307 (771) Q Consensus 228 ~~~G~yPSnaD~~n~~~~~~s~~e~~~~~~F~~~~~~~n~~Gs~~aarG~yI~d~~~~~~s~~~~~~~~~~~~p~~~~~t 307 (771) ...+ T Consensus 158 ------------------------------------~~~p---------------------------------------- 161 (594) T protein:vir:10 158 ------------------------------------GAVP---------------------------------------- 161 (594) T ss_pred ------------------------------------Cccc---------------------------------------- Confidence 0000 Q ss_pred eecchhhccCCceeeeeecceeEEeeecceeecccccCCcccceeEEEeeecchhhccccccCCCCcCchhhhhhhcCCC Q lcl|Aclame:pro 308 SSLPQDETPGGASVVCEYAGRVWYAGFSGQIIDGDDQSPRLVSYILFSQLVDSPADIVNCYQDGDPTSTEEPELVDTDGG 387 (771) Q Consensus 308 ~~~p~d~~~g~~t~v~~~aGRv~y~g~~~~~~~~~~~~p~~~~yv~fSqli~s~~~lg~CyQ~~DPts~~~~dl~dtDGG 387 (771) +.+.+.+.|++|+-|-+|++++|.... |. .|++||.=| |.+=+|+++ +.|+|-= T Consensus 162 ---~~~~~~~~p~~v~f~q~RL~f~~~~~~--------p~---~v~~Srtgd--------~~nF~~~~~----~~ddd~i 215 (594) T protein:vir:10 162 ---AEWSPSNYPQTVGIFQNRVWYVGSPVH--------RT---YFWATRAGK--------LEDIAPSTA----NNPNDPI 215 (594) T ss_pred ---ccccCCccceEEEEEeeeEEEEeCCCC--------Cc---eEEEEeccc--------ccccccCCC----CCCCccE Confidence 001135788999999999999885443 32 588887633 444455553 2355544 Q ss_pred EEeecCCCceeEEEeecceeEEEecceEEEEEecccceeeecceeeeeeeeeeecCccceEEeCCeEEEEecCc--eEEe Q lcl|Aclame:pro 388 FIRIEGAHDIINLVNVGSAVMVVAANGIWMIQGGSDYGFTATNYLVTKISEHGCSSPNSVVVVDNSFMYWGDDG--IYHL 465 (771) Q Consensus 388 ~I~I~ga~~Iv~mv~~~ssLlVft~nGVWal~G~S~~~fsAt~y~V~KISd~GcvspnSIV~id~aVvYwSDsG--I~~L 465 (771) .+-+-...+++.+++++..|++||..|.|.|+++++..+++++-.++++|..||.+ --=+.+|++++|.+.+| |+.+ T Consensus 216 ~~~~s~~~~~~~~v~~~~~L~i~t~~~e~~l~~~~~~~lTp~~~~~~~~s~~g~~~-~~P~~vg~~~~fv~~~g~~vre~ 294 (594) T protein:vir:10 216 SFVGIMEGTPCWIIASSDVLTIGTTINDYQLAASTGVSVTAATAILRRSSVQGTAA-VQGIPAEEQVIFCSRNKSKVYAM 294 (594) T ss_pred EEEEecccceEEEEecCCceEEEecCceEEEecCCCcccccceEEEEEeeeeccCC-CcceeeCCeEEEEcCCCCEEEEE Confidence 44444456888899999999999999999999988888999999999999999943 34578899999999987 7777 Q ss_pred ccc-ccCcccccccCchhhhhhhhhcChhHhccee-EEEEeeccEEEEEecccccccccccceeEEecccccceeeeecc Q lcl|Aclame:pro 466 TRN-QYGDYVANNLTEKTIQKYYEKIPSDAILNAT-GFYDSYDKKVKWLYNTVLDGRTEPVTELVFDLALGAFYPSKIGS 543 (771) Q Consensus 466 ~~n-e~g~~ss~nLte~tIqt~~~sip~~~k~~~~-g~yD~~~~~v~wly~e~~d~~~~y~tElVf~L~~~afY~~ki~s 543 (771) ..+ +..-+.+++||.. ++-++..+........+ .-|..-..++.|+..++-...+..+ .=+.+-.||-+|.+. T Consensus 295 ~y~~~~d~y~~~dlt~~-a~hl~~~~~~~~~~~i~~~a~~~~p~~~~~~v~~dG~l~~~ty---~~eq~v~aWs~~~~t- 369 (594) T protein:vir:10 295 NYVREQDNWIPDEMSSQ-AQHLFTPISSAKGASVRRVAYISDAAKSLWVVLENGQINYCCF---DRTTDTKAWTQLELS- 369 (594) T ss_pred EEeeccCceeccchhhh-hhhhcCccccccCceEEEEEEecCCceEEEEEeCCCeEEEEEE---ecccceeeeEeeccC- Confidence 766 3466778888875 54333322222212212 3455666788899865333322221 222333489888663 Q ss_pred eeccceeeeeeeeeeCC------ceeeecceEE--------eec---c--cceeeccceeeeeeeeee----eeeeeeEE Q lcl|Aclame:pro 544 LTAGRLPIPVGSVKIPP------YKLVETGEEV--------TVA---S--EQVTATGELVTVKVSTRS----PVIRETKY 600 (771) Q Consensus 544 ~~ags~~~~i~s~~vp~------y~~~~t~~~V--------~v~---~--~~vv~~~~~v~~~~~~~~----~~~r~~~y 600 (771) .|-. ..| ..||+ |.++.-...| .++ . ..-....+-++.+.++.. +-.-+.+. T Consensus 370 --~G~v-~~v--a~i~~~~~d~l~~~V~R~~ti~g~~~~y~~lE~~~~~~~~~~~~~~~~d~~~~~~~~vsgl~hLeg~t 444 (594) T protein:vir:10 370 --GGKV-IDI--AAAFNPDSDYAYVAVVRSKAINGVQKNYTVLEKISSPRTDWKRADGWVVAQVNQNGDVLNLDRYIGRT 444 (594) T ss_pred --CCcE-EEE--EEeecCCCCEEEEEEEECCccccceeeEEEeecCCCccccccccceeeeecccccceeecccccCCce Confidence 3321 111 11332 1222110000 000 0 000000011111111100 00001111 Q ss_pred EEEEEcCCCc-eEEE--eeecCCchhhccccCC-cccchhHhhhhhccccccceeeeecceEEEEEeeecceeEecccce Q lcl|Aclame:pro 601 IIVEKLSSPM-RISF--GGYTDEEFVDWKSVDG-IGVDAPAYLLTGYLAGGDYQREKFVPYITFHFKKTEDGFVEDAEGD 676 (771) Q Consensus 601 ~~~~~~g~~~-~~sF--~~~~~d~F~Dw~~~~~-~gvd~~sy~~tgy~~~gd~~r~K~~pyl~~~~~~TEd~~t~d~~g~ 676 (771) +.+.-+|... .+.. .+-+-+...|+....- +|-.|.+.+.+=+. + .++++|-.... T Consensus 445 v~v~aDG~~~~~~~V~~g~itL~~~~~~~~~~v~VGl~Y~s~i~~lp~----------------~-~~~~~gs~~g~--- 504 (594) T protein:vir:10 445 AVIFSKYGLEAEVEVNNIGLTHRINGYDPNTVYYVGYKMDSYFRTLTP----------------S-NGDMKKSMFGS--- 504 (594) T ss_pred EEEEeCCeecCCeEEcCCeeEeeccCCCCcceEEEeeeeeEEEEeecc----------------c-ccCCcccccCc--- Confidence 1111111100 0000 0000000000000000 11111111110000 0 12233322111 Q ss_pred EEEcCccceEEEEEEeeccCCCCCcccchheeee-----eeehcccCCCCcCCCCcceeeeeccccceeeeEEEEEEEec Q lcl|Aclame:pro 677 WTPTNQSSCMVQSQWSWTNSPASNKWGRTWQAYR-----FRRHFFPDNIDNQFDDGNSVVETKSRLRGSGKVLSLYITTE 751 (771) Q Consensus 677 ~~~~n~SScl~~~~w~~s~~~~~~kw~~~~q~Yr-----~~r~~~p~~~~~~f~~~~~VV~TK~~~RG~G~~~~~~f~se 751 (771) =-+ +-++.-++-+|. +.+.+.+...+| ++.+..+..+....-.|...|... ..|.-+--+|+++.. T Consensus 505 r~r------i~r~~v~~~~S~-g~~vg~~~~~~r~~~~~~~~~~~~~~g~~~~~tg~~~v~~~--~~G~~~~~~i~I~qd 575 (594) T protein:vir:10 505 KIR------ISKVQLALFDSI-EPTVNGEPADDRSTDDIMDARLLDFSSNSGSSNGTRLVDYN--PLGWENDGKMVIAVE 575 (594) T ss_pred cEE------EEEEEEEEEcce-eeEECCcccccccchhhccccCCcccCcccccCCceEEEEc--cCCcCcccEEEEEEC Confidence 111 111222222221 122222211222 222222333333333444433222 245557789999999 Q ss_pred CCCceEEEeEEEEEEeecC Q lcl|Aclame:pro 752 PKKNLHIYGWSMLVDVNGT 770 (771) Q Consensus 752 ~~KD~~llG~~~~~~~~g~ 770 (771) .-.-|+||+-.+.|.++=- T Consensus 576 ~PlPltvlai~~ev~~~~~ 594 (594) T protein:vir:10 576 QPFLCEVVGVFSVVQSNKV 594 (594) T ss_pred CCcCEEEEEEEEEEEeccC Confidence 9999999999999998655 No 9 >protein:vir:107423 Length: 681 # NCBI annotation: Bbp13 # Family: family:all:780 # MgeID: mge:1537 # MgeName: BPP-1 # Cross-refs: genbank:acc:NP_958682;genbank:gi:41179374;genbank:GeneID:2717217 Probab=99.66 E-value=9.1e-14 Score=92.07 Aligned_cols=615 Identities=16% Similarity=0.184 Sum_probs=285.7 Q ss_pred CchhhhhhhhccccceeeeccchhcCC-------CCccccceeeeeccccchhhhhcceeec----CCce-eecceeecc Q lcl|Aclame:pro 1 MAKTTNAAEFNTFVGGLITEASPLTFP-------QNASIDEVNFILNRDGSRNRRNGMDFEN----GATK-VVCNTLVPA 68 (771) Q Consensus 1 Ma~~~~~~e~ntFv~GliTEan~Lt~P-------~nas~De~N~~L~k~G~r~RR~Gl~~E~----s~~~-~l~~~~~~s 68 (771) |++.. .--+.|-.|= -+|+-+. ++....-+||+...-|--.||-|+-+-. ++.. -|.++.-.+ T Consensus 1 m~~~~--~~~~~f~~Ge---~~p~l~~r~D~~~y~~~~~~~~N~~~~~~G~~~~R~g~~~~~~~~~~~~~~rlipf~~~~ 75 (681) T protein:vir:10 1 MSNVR--VLQRSFGGGE---ISPEMFGRIDDVKYQSGLAICRNFVVKPQGPAENRAGFAFVREVKDSAKKVRLIPFTYSV 75 (681) T ss_pred Cccee--EeeeecCCce---eeeeeccchhHHHHHHHHHHhcCcEEEecCCceecChhHhhhhcCCCCCcEEEEEEEeCC Confidence 99864 3567888884 4555443 2344556899999999999999987543 2211 244444333 Q ss_pred CceeeeeechhhhccCccceeEEEEEEccEEEEEecCCcee-eheeeEeeecceeCCC---c--ceeeEEeeEEEEEEcC Q lcl|Aclame:pro 69 DGTIAVTSHNWENAGGEVGRWISLVQVGTELKFFQTTGETL-SEGNFYNYQFVNMSPS---H--KLSYAVVDGLLVVANG 142 (771) Q Consensus 69 ~~~~~vt~~~W~~~~g~v~~~~l~~q~g~~l~~~d~t~~~l-Sn~~l~~~~fv~~sP~---~--~is~~~v~G~lVva~~ 142 (771) .+++ +|.+ -...++||..- ..| .++.. ++ ..+|= + .|+++-..-.++|+.+ T Consensus 76 ~~~~-----------------~l~~-g~~~~r~~~~~-~~~~~~~~~--~~--~~tpy~~~~l~~l~~~q~aD~~~i~h~ 132 (681) T protein:vir:10 76 TQTM-----------------VIEL-GAGYFRFHTNG-GTLLDGAVP--YE--IANPYAEADLFNIHYVQSADVLTLVHP 132 (681) T ss_pred CceE-----------------EEEE-eCCeEEEEeCC-cEEeeCcEe--EE--ecCCCChhhhcCceEEEEcCEEEEECC Confidence 3322 2222 12245566433 333 22221 22 22333 1 4999999999999999 Q ss_pred CcceEEEeccC-CceeeEEEEEEEEEeeeeccccccCcceeccccccCCCccCchhheeeeeccccceeeeeccCCCCcc Q lcl|Aclame:pro 143 SRDIYVFEYDS-GSVSVTTKRLLVRDLFGVQDIVNGVDLRQGNDIATRPTVQTNAHIYNLRNQTFGVPRVTWHSNEPSDP 221 (771) Q Consensus 143 ~~~~~i~~~~~-~s~~~~t~~l~iRd~~~l~d~~~g~~~~~~~~~~~rpttlS~eh~YnL~NqgW~~~~~~~~s~s~~~~ 221 (771) .-|..=|.-.+ ++..+.+.. +..--. ..++ ..+++-...-.|..+-.-+++... ....+.... T Consensus 133 ~~~p~~L~r~~~~~W~l~~~~--f~~~p~-----~p~~--------~~at~~~~~~~~t~~~~v~avda~-t~~~s~~~~ 196 (681) T protein:vir:10 133 NYAPRELRRLGATNWQLATIA--FTSPVA-----TPTS--------VTATSNNKGTDYTYRYVVTALDAE-GKTESAPSS 196 (681) T ss_pred CCcceEEEEccCCceEEEEEE--eccccc-----ccee--------eeeeccCCccceeEeEEEEEeecc-cceeecCCc Confidence 99764443332 222222221 111100 0000 001111111122222222222111 001111111 Q ss_pred eEEEccccccCCcCcchheeeccccccCCCcccccccchhhhhccccccccCCCcce---------EEEeeecCccccee Q lcl|Aclame:pro 222 IVTFRSAASGKFPSNSDSVNLALSKRADVEPSTTDRFRAEDIVLNPIGTYETARGFF---------IIDAMARGKSRLEE 292 (771) Q Consensus 222 vv~~~~~~~G~yPSnaD~~n~~~~~~s~~e~~~~~~F~~~~~~~n~~Gs~~aarG~y---------I~d~~~~~~s~~~~ 292 (771) .++.+. ..|-++. . ...+..|..|-- .+..+ .+.+.-+. T Consensus 197 ~~tvt~---~~~~~~~-~---------------------------~t~~w~a~~g~~~~~V~~~~~gi~g~-ig~~~~~~ 244 (681) T protein:vir:10 197 AGTCTN---NLFTNGG-A---------------------------NTIAWSASSGASRYNVYKEQGGLYGY-IGQTTGTS 244 (681) T ss_pred ceEEee---eeecCCc-c---------------------------eeEEEEecCCceeeeecccceeEEEE-eeccceee Confidence 111100 1111100 0 000111111111 11111 12111111 Q ss_pred eeecccccccccc--eeeecchhhccCCceeeeeecceeEEeeecceeecccccCCcccceeEEEeeecchhhccccccC Q lcl|Aclame:pro 293 IVKLKQRYPSLSF--GVSSLPQDETPGGASVVCEYAGRVWYAGFSGQIIDGDDQSPRLVSYILFSQLVDSPADIVNCYQD 370 (771) Q Consensus 293 ~~~~~~~~p~~~~--~t~~~p~d~~~g~~t~v~~~aGRv~y~g~~~~~~~~~~~~p~~~~yv~fSqli~s~~~lg~CyQ~ 370 (771) ....+.. |.... ...-.|-....|+|+||+=|-+|++++|..+ +|. +|++||.=| |.+ T Consensus 245 ~~~~~~~-~~~~~t~~~~~~~~~~~~gyP~~v~f~q~RL~f~~~~~--------~p~---~v~~Srsgd--------y~n 304 (681) T protein:vir:10 245 LVDDNIA-PDLSVTPPIYDAVFNAAGDYPAAVSYFEQRRCFAGTTN--------KPQ---NIWMTRSGT--------ESA 304 (681) T ss_pred eeecccc-cCccccccccccccccCCCceEEEEEEcceEEEeeCCC--------CCc---EEEEEcccC--------ccc Confidence 1111110 00000 0011233446789999999999999988432 233 799988633 444 Q ss_pred CCCcCchhhhhhhcCCCEEeecC--CCceeEEEeecceeEEEecceEEEEEecccceeeecceeeeeeeeeeecCccceE Q lcl|Aclame:pro 371 GDPTSTEEPELVDTDGGFIRIEG--AHDIINLVNVGSAVMVVAANGIWMIQGGSDYGFTATNYLVTKISEHGCSSPNSVV 448 (771) Q Consensus 371 ~DPts~~~~dl~dtDGG~I~I~g--a~~Iv~mv~~~ssLlVft~nGVWal~G~S~~~fsAt~y~V~KISd~GcvspnSIV 448 (771) =+|.+. +.|+|--.+.+-+ ...|..|++++. |+||+..+-|+|.++.+..+++++-.+.++|..||.+ =.=+ T Consensus 305 F~~~~~----~~ddD~i~~~~~~~~~~~i~~~v~~~~-lli~t~~~e~~l~~~~~~~lTP~~~~~~~~s~~g~~~-~~Pv 378 (681) T protein:vir:10 305 MSYSLP----VRDDDRVAFRVAAREANAIRHIVPLTE-LLLLTSSGEWRVASVNSDAVTPTTISVRPQSYVGATD-VQPV 378 (681) T ss_pred ccccCC----CCCCccEEEEEcCCcceeEEEEEecCc-EEEEEcCcEEEEecCCCccccceeEEEEEeeeecccc-ccce Confidence 455442 3477766665544 356999999975 9999999999999877779999999999999999954 4567 Q ss_pred EeCCeEEEEecCc--eEEeccc-ccCcccccccCchhhhhhhhhcChhHhcceeEEEEeeccEEEEEecccccccccccc Q lcl|Aclame:pro 449 VVDNSFMYWGDDG--IYHLTRN-QYGDYVANNLTEKTIQKYYEKIPSDAILNATGFYDSYDKKVKWLYNTVLDGRTEPVT 525 (771) Q Consensus 449 ~id~aVvYwSDsG--I~~L~~n-e~g~~ss~nLte~tIqt~~~sip~~~k~~~~g~yD~~~~~v~wly~e~~d~~~~y~t 525 (771) .+|++++|.+.+| |+.+..+ +..-+.+++||.. ..-+++.+. -....|..-.+++.|+..+ |.. .+. T Consensus 379 ~vg~~v~fv~~~g~~vre~~y~~~~d~~~~~dlt~~-a~Hl~~~~~-----i~~~a~~~~p~~~~~~v~~--dg~-l~~- 448 (681) T protein:vir:10 379 VVNNTTIYGAARGGHVRELAYNWQANGFVTGDLSLR-AAHLFDNLD-----ILDMAYAKAPQPIVWFISS--SGK-LLG- 448 (681) T ss_pred eeCCeEEEEecCCCEEEEEEEeeecCceeccchhhh-hhhhcCCCC-----eEEEEEecCCCEEEEEEec--CCc-EEE- Confidence 8899999999999 7767777 4566778888853 333333331 1113455666888888753 211 111 Q ss_pred eeEEe--cccccceeeeecceeccceeeeeeeeeeCCc-----eeeecc-----eE--Ee-ecccc--eeeccceeeeee Q lcl|Aclame:pro 526 ELVFD--LALGAFYPSKIGSLTAGRLPIPVGSVKIPPY-----KLVETG-----EE--VT-VASEQ--VTATGELVTVKV 588 (771) Q Consensus 526 ElVf~--L~~~afY~~ki~s~~ags~~~~i~s~~vp~y-----~~~~t~-----~~--V~-v~~~~--vv~~~~~v~~~~ 588 (771) +.++ .+-.||.+|.+ .|....+| + +|.+ +++-.+ +. |+ .+... .-..+.-++.+. T Consensus 449 -~ty~~eq~v~aW~~~~~----~g~v~~v~-~--i~~~~~d~l~~vv~r~~~g~~~~yie~~~~~~~~~~~~~~~vD~~~ 520 (681) T protein:vir:10 449 -LTYVPEQQIGAWHQHDT----DGVFESCA-V--VAEGNEDRLYAVVRRTIGGNEVRYVERMASRQFDAQADAFFVDSGL 520 (681) T ss_pred -EEEecccceeeEEEEec----CCcEEEEE-E--ecCCCCcEEEEEEEecCCCCeEEEEEecCCccccccccceEeeccc Confidence 2222 23349999965 33322221 1 2221 111000 00 00 00000 000011111111 Q ss_pred eeee--------eeeeeeEEEEEEEcCCCceEEEeeecCCchhhccccCC-cccch-hHhhhhhccccccceeeeecceE Q lcl|Aclame:pro 589 STRS--------PVIRETKYIIVEKLSSPMRISFGGYTDEEFVDWKSVDG-IGVDA-PAYLLTGYLAGGDYQREKFVPYI 658 (771) Q Consensus 589 ~~~~--------~~~r~~~y~~~~~~g~~~~~sF~~~~~d~F~Dw~~~~~-~gvd~-~sy~~tgy~~~gd~~r~K~~pyl 658 (771) ++.. .-.-+-+.+.+.-+|... ..+..++ | +-.+. -+.+.-|+.+.-.+. - + T Consensus 521 t~~~~~~~~~sgl~~leG~tv~i~aDG~~~---------~~~~V~~---G~itl~~~~~~v~VGl~Y~s~i~---~---l 582 (681) T protein:vir:10 521 TYSGEPVSHISGLEHLEGKTVSILADGAVH---------PQRVVTD---GAIDLDVEAGTVHIGLPITAELQ---T---L 582 (681) T ss_pred cccCcceeeeccccCCCCcEEEEEeCCeec---------CcEeecC---cEEEeCcCCceEEEeeeceeEEE---e---c Confidence 1110 000123334444333211 1111110 1 00111 112333333321111 1 1 Q ss_pred EEEEeeecceeEecccceEEEcCccceEEEEEEeeccCCCCCcccc-hheeeeeeehcccCCCCcCC--CCcceeeeecc Q lcl|Aclame:pro 659 TFHFKKTEDGFVEDAEGDWTPTNQSSCMVQSQWSWTNSPASNKWGR-TWQAYRFRRHFFPDNIDNQF--DDGNSVVETKS 735 (771) Q Consensus 659 ~~~~~~TEd~~t~d~~g~~~~~n~SScl~~~~w~~s~~~~~~kw~~-~~q~Yr~~r~~~p~~~~~~f--~~~~~VV~TK~ 735 (771) ..++ +++++.. -|.-.+.+ -|.++. -++. +.+-+. ..+.+.++++ -++.+..+- ..| .+. . T Consensus 583 p~~~-~~~~g~~---~g~~~ri~--rv~lr~----~~S~-g~~~~~~~~~l~~~~~~-~~~~~g~~~~l~TG--~~~--v 646 (681) T protein:vir:10 583 PVAM-QLDGSFG---QGRVKNIN--KLWLRV----HRSS-GIFAGPHADALTEVKQR-TSEPYGSPPALKSE--EIP--L 646 (681) T ss_pred ceee-ecCCccc---CCceEEEE--EEEEEE----Eccc-ceEEeeCCCceEEEEEe-ccccccccCCccCC--eEE--E Confidence 2233 3334322 11122221 222222 1111 111110 0122232211 144333321 122 222 2 Q ss_pred ccce-eeeEEEEEEEecCCCceEEEeEEEEEEeec Q lcl|Aclame:pro 736 RLRG-SGKVLSLYITTEPKKNLHIYGWSMLVDVNG 769 (771) Q Consensus 736 ~~RG-~G~~~~~~f~se~~KD~~llG~~~~~~~~g 769 (771) .++| .-+-.+|.+++..-..|+||+-..++.|.| T Consensus 647 ~v~~~~~~~~~v~I~qd~PlP~tvlsi~~ev~vgg 681 (681) T protein:vir:10 647 VLSPKWGDSGQLFVRQADPLPLMIVSMSAEIAIGA 681 (681) T ss_pred EeCCCcCcceEEEEEECCCcCEEEEEeeEEEEeeC Confidence 3554 367788999999999999999999999999 No 10 >protein:vir:98487 Length: 681 # NCBI annotation: hypothetical protein predicted by GeneMark # Family: family:all:780 # MgeID: mge:1592 # MgeName: BMP-1 # Cross-refs: genbank:acc:NP_996575;genbank:gi:45569506;genbank:GeneID:2767815 Probab=99.66 E-value=9.1e-14 Score=92.07 Aligned_cols=615 Identities=16% Similarity=0.184 Sum_probs=285.7 Q ss_pred CchhhhhhhhccccceeeeccchhcCC-------CCccccceeeeeccccchhhhhcceeec----CCce-eecceeecc Q lcl|Aclame:pro 1 MAKTTNAAEFNTFVGGLITEASPLTFP-------QNASIDEVNFILNRDGSRNRRNGMDFEN----GATK-VVCNTLVPA 68 (771) Q Consensus 1 Ma~~~~~~e~ntFv~GliTEan~Lt~P-------~nas~De~N~~L~k~G~r~RR~Gl~~E~----s~~~-~l~~~~~~s 68 (771) |++.. .--+.|-.|= -+|+-+. ++....-+||+...-|--.||-|+-+-. ++.. -|.++.-.+ T Consensus 1 m~~~~--~~~~~f~~Ge---~~p~l~~r~D~~~y~~~~~~~~N~~~~~~G~~~~R~g~~~~~~~~~~~~~~rlipf~~~~ 75 (681) T protein:vir:98 1 MSNVR--VLQRSFGGGE---ISPEMFGRIDDVKYQSGLAICRNFVVKPQGPAENRAGFAFVREVKDSAKKVRLIPFTYSV 75 (681) T ss_pred Cccee--EeeeecCCce---eeeeeccchhHHHHHHHHHHhcCcEEEecCCceecChhHhhhhcCCCCCcEEEEEEEeCC Confidence 99864 3567888884 4555443 2344556899999999999999987543 2211 244444333 Q ss_pred CceeeeeechhhhccCccceeEEEEEEccEEEEEecCCcee-eheeeEeeecceeCCC---c--ceeeEEeeEEEEEEcC Q lcl|Aclame:pro 69 DGTIAVTSHNWENAGGEVGRWISLVQVGTELKFFQTTGETL-SEGNFYNYQFVNMSPS---H--KLSYAVVDGLLVVANG 142 (771) Q Consensus 69 ~~~~~vt~~~W~~~~g~v~~~~l~~q~g~~l~~~d~t~~~l-Sn~~l~~~~fv~~sP~---~--~is~~~v~G~lVva~~ 142 (771) .+++ +|.+ -...++||..- ..| .++.. ++ ..+|= + .|+++-..-.++|+.+ T Consensus 76 ~~~~-----------------~l~~-g~~~~r~~~~~-~~~~~~~~~--~~--~~tpy~~~~l~~l~~~q~aD~~~i~h~ 132 (681) T protein:vir:98 76 TQTM-----------------VIEL-GAGYFRFHTNG-GTLLDGAVP--YE--IANPYAEADLFNIHYVQSADVLTLVHP 132 (681) T ss_pred CceE-----------------EEEE-eCCeEEEEeCC-cEEeeCcEe--EE--ecCCCChhhhcCceEEEEcCEEEEECC Confidence 3322 2222 12245566433 333 22221 22 22333 1 4999999999999999 Q ss_pred CcceEEEeccC-CceeeEEEEEEEEEeeeeccccccCcceeccccccCCCccCchhheeeeeccccceeeeeccCCCCcc Q lcl|Aclame:pro 143 SRDIYVFEYDS-GSVSVTTKRLLVRDLFGVQDIVNGVDLRQGNDIATRPTVQTNAHIYNLRNQTFGVPRVTWHSNEPSDP 221 (771) Q Consensus 143 ~~~~~i~~~~~-~s~~~~t~~l~iRd~~~l~d~~~g~~~~~~~~~~~rpttlS~eh~YnL~NqgW~~~~~~~~s~s~~~~ 221 (771) .-|..=|.-.+ ++..+.+.. +..--. ..++ ..+++-...-.|..+-.-+++... ....+.... T Consensus 133 ~~~p~~L~r~~~~~W~l~~~~--f~~~p~-----~p~~--------~~at~~~~~~~~t~~~~v~avda~-t~~~s~~~~ 196 (681) T protein:vir:98 133 NYAPRELRRLGATNWQLATIA--FTSPVA-----TPTS--------VTATSNNKGTDYTYRYVVTALDAE-GKTESAPSS 196 (681) T ss_pred CCcceEEEEccCCceEEEEEE--eccccc-----ccee--------eeeeccCCccceeEeEEEEEeecc-cceeecCCc Confidence 99764443332 222222221 111100 0000 001111111122222222222111 001111111 Q ss_pred eEEEccccccCCcCcchheeeccccccCCCcccccccchhhhhccccccccCCCcce---------EEEeeecCccccee Q lcl|Aclame:pro 222 IVTFRSAASGKFPSNSDSVNLALSKRADVEPSTTDRFRAEDIVLNPIGTYETARGFF---------IIDAMARGKSRLEE 292 (771) Q Consensus 222 vv~~~~~~~G~yPSnaD~~n~~~~~~s~~e~~~~~~F~~~~~~~n~~Gs~~aarG~y---------I~d~~~~~~s~~~~ 292 (771) .++.+. ..|-++. . ...+..|..|-- .+..+ .+.+.-+. T Consensus 197 ~~tvt~---~~~~~~~-~---------------------------~t~~w~a~~g~~~~~V~~~~~gi~g~-ig~~~~~~ 244 (681) T protein:vir:98 197 AGTCTN---NLFTNGG-A---------------------------NTIAWSASSGASRYNVYKEQGGLYGY-IGQTTGTS 244 (681) T ss_pred ceEEee---eeecCCc-c---------------------------eeEEEEecCCceeeeecccceeEEEE-eeccceee Confidence 111100 1111100 0 000111111111 11111 12111111 Q ss_pred eeecccccccccc--eeeecchhhccCCceeeeeecceeEEeeecceeecccccCCcccceeEEEeeecchhhccccccC Q lcl|Aclame:pro 293 IVKLKQRYPSLSF--GVSSLPQDETPGGASVVCEYAGRVWYAGFSGQIIDGDDQSPRLVSYILFSQLVDSPADIVNCYQD 370 (771) Q Consensus 293 ~~~~~~~~p~~~~--~t~~~p~d~~~g~~t~v~~~aGRv~y~g~~~~~~~~~~~~p~~~~yv~fSqli~s~~~lg~CyQ~ 370 (771) ....+.. |.... ...-.|-....|+|+||+=|-+|++++|..+ +|. +|++||.=| |.+ T Consensus 245 ~~~~~~~-~~~~~t~~~~~~~~~~~~gyP~~v~f~q~RL~f~~~~~--------~p~---~v~~Srsgd--------y~n 304 (681) T protein:vir:98 245 LVDDNIA-PDLSVTPPIYDAVFNAAGDYPAAVSYFEQRRCFAGTTN--------KPQ---NIWMTRSGT--------ESA 304 (681) T ss_pred eeecccc-cCccccccccccccccCCCceEEEEEEcceEEEeeCCC--------CCc---EEEEEcccC--------ccc Confidence 1111110 00000 0011233446789999999999999988432 233 799988633 444 Q ss_pred CCCcCchhhhhhhcCCCEEeecC--CCceeEEEeecceeEEEecceEEEEEecccceeeecceeeeeeeeeeecCccceE Q lcl|Aclame:pro 371 GDPTSTEEPELVDTDGGFIRIEG--AHDIINLVNVGSAVMVVAANGIWMIQGGSDYGFTATNYLVTKISEHGCSSPNSVV 448 (771) Q Consensus 371 ~DPts~~~~dl~dtDGG~I~I~g--a~~Iv~mv~~~ssLlVft~nGVWal~G~S~~~fsAt~y~V~KISd~GcvspnSIV 448 (771) =+|.+. +.|+|--.+.+-+ ...|..|++++. |+||+..+-|+|.++.+..+++++-.+.++|..||.+ =.=+ T Consensus 305 F~~~~~----~~ddD~i~~~~~~~~~~~i~~~v~~~~-lli~t~~~e~~l~~~~~~~lTP~~~~~~~~s~~g~~~-~~Pv 378 (681) T protein:vir:98 305 MSYSLP----VRDDDRVAFRVAAREANAIRHIVPLTE-LLLLTSSGEWRVASVNSDAVTPTTISVRPQSYVGATD-VQPV 378 (681) T ss_pred ccccCC----CCCCccEEEEEcCCcceeEEEEEecCc-EEEEEcCcEEEEecCCCccccceeEEEEEeeeecccc-ccce Confidence 455442 3477766665544 356999999975 9999999999999877779999999999999999954 4567 Q ss_pred EeCCeEEEEecCc--eEEeccc-ccCcccccccCchhhhhhhhhcChhHhcceeEEEEeeccEEEEEecccccccccccc Q lcl|Aclame:pro 449 VVDNSFMYWGDDG--IYHLTRN-QYGDYVANNLTEKTIQKYYEKIPSDAILNATGFYDSYDKKVKWLYNTVLDGRTEPVT 525 (771) Q Consensus 449 ~id~aVvYwSDsG--I~~L~~n-e~g~~ss~nLte~tIqt~~~sip~~~k~~~~g~yD~~~~~v~wly~e~~d~~~~y~t 525 (771) .+|++++|.+.+| |+.+..+ +..-+.+++||.. ..-+++.+. -....|..-.+++.|+..+ |.. .+. T Consensus 379 ~vg~~v~fv~~~g~~vre~~y~~~~d~~~~~dlt~~-a~Hl~~~~~-----i~~~a~~~~p~~~~~~v~~--dg~-l~~- 448 (681) T protein:vir:98 379 VVNNTTIYGAARGGHVRELAYNWQANGFVTGDLSLR-AAHLFDNLD-----ILDMAYAKAPQPIVWFISS--SGK-LLG- 448 (681) T ss_pred eeCCeEEEEecCCCEEEEEEEeeecCceeccchhhh-hhhhcCCCC-----eEEEEEecCCCEEEEEEec--CCc-EEE- Confidence 8899999999999 7767777 4566778888853 333333331 1113455666888888753 211 111 Q ss_pred eeEEe--cccccceeeeecceeccceeeeeeeeeeCCc-----eeeecc-----eE--Ee-ecccc--eeeccceeeeee Q lcl|Aclame:pro 526 ELVFD--LALGAFYPSKIGSLTAGRLPIPVGSVKIPPY-----KLVETG-----EE--VT-VASEQ--VTATGELVTVKV 588 (771) Q Consensus 526 ElVf~--L~~~afY~~ki~s~~ags~~~~i~s~~vp~y-----~~~~t~-----~~--V~-v~~~~--vv~~~~~v~~~~ 588 (771) +.++ .+-.||.+|.+ .|....+| + +|.+ +++-.+ +. |+ .+... .-..+.-++.+. T Consensus 449 -~ty~~eq~v~aW~~~~~----~g~v~~v~-~--i~~~~~d~l~~vv~r~~~g~~~~yie~~~~~~~~~~~~~~~vD~~~ 520 (681) T protein:vir:98 449 -LTYVPEQQIGAWHQHDT----DGVFESCA-V--VAEGNEDRLYAVVRRTIGGNEVRYVERMASRQFDAQADAFFVDSGL 520 (681) T ss_pred -EEEecccceeeEEEEec----CCcEEEEE-E--ecCCCCcEEEEEEEecCCCCeEEEEEecCCccccccccceEeeccc Confidence 2222 23349999965 33322221 1 2221 111000 00 00 00000 000011111111 Q ss_pred eeee--------eeeeeeEEEEEEEcCCCceEEEeeecCCchhhccccCC-cccch-hHhhhhhccccccceeeeecceE Q lcl|Aclame:pro 589 STRS--------PVIRETKYIIVEKLSSPMRISFGGYTDEEFVDWKSVDG-IGVDA-PAYLLTGYLAGGDYQREKFVPYI 658 (771) Q Consensus 589 ~~~~--------~~~r~~~y~~~~~~g~~~~~sF~~~~~d~F~Dw~~~~~-~gvd~-~sy~~tgy~~~gd~~r~K~~pyl 658 (771) ++.. .-.-+-+.+.+.-+|... ..+..++ | +-.+. -+.+.-|+.+.-.+. - + T Consensus 521 t~~~~~~~~~sgl~~leG~tv~i~aDG~~~---------~~~~V~~---G~itl~~~~~~v~VGl~Y~s~i~---~---l 582 (681) T protein:vir:98 521 TYSGEPVSHISGLEHLEGKTVSILADGAVH---------PQRVVTD---GAIDLDVEAGTVHIGLPITAELQ---T---L 582 (681) T ss_pred cccCcceeeeccccCCCCcEEEEEeCCeec---------CcEeecC---cEEEeCcCCceEEEeeeceeEEE---e---c Confidence 1110 000123334444333211 1111110 1 00111 112333333321111 1 1 Q ss_pred EEEEeeecceeEecccceEEEcCccceEEEEEEeeccCCCCCcccc-hheeeeeeehcccCCCCcCC--CCcceeeeecc Q lcl|Aclame:pro 659 TFHFKKTEDGFVEDAEGDWTPTNQSSCMVQSQWSWTNSPASNKWGR-TWQAYRFRRHFFPDNIDNQF--DDGNSVVETKS 735 (771) Q Consensus 659 ~~~~~~TEd~~t~d~~g~~~~~n~SScl~~~~w~~s~~~~~~kw~~-~~q~Yr~~r~~~p~~~~~~f--~~~~~VV~TK~ 735 (771) ..++ +++++.. -|.-.+.+ -|.++. -++. +.+-+. ..+.+.++++ -++.+..+- ..| .+. . T Consensus 583 p~~~-~~~~g~~---~g~~~ri~--rv~lr~----~~S~-g~~~~~~~~~l~~~~~~-~~~~~g~~~~l~TG--~~~--v 646 (681) T protein:vir:98 583 PVAM-QLDGSFG---QGRVKNIN--KLWLRV----HRSS-GIFAGPHADALTEVKQR-TSEPYGSPPALKSE--EIP--L 646 (681) T ss_pred ceee-ecCCccc---CCceEEEE--EEEEEE----Eccc-ceEEeeCCCceEEEEEe-ccccccccCCccCC--eEE--E Confidence 2233 3334322 11122221 222222 1111 111110 0122232211 144333321 122 222 2 Q ss_pred ccce-eeeEEEEEEEecCCCceEEEeEEEEEEeec Q lcl|Aclame:pro 736 RLRG-SGKVLSLYITTEPKKNLHIYGWSMLVDVNG 769 (771) Q Consensus 736 ~~RG-~G~~~~~~f~se~~KD~~llG~~~~~~~~g 769 (771) .++| .-+-.+|.+++..-..|+||+-..++.|.| T Consensus 647 ~v~~~~~~~~~v~I~qd~PlP~tvlsi~~ev~vgg 681 (681) T protein:vir:98 647 VLSPKWGDSGQLFVRQADPLPLMIVSMSAEIAIGA 681 (681) T ss_pred EeCCCcCcceEEEEEECCCcCEEEEEeeEEEEeeC Confidence 3554 367788999999999999999999999999 No 11 >protein:vir:107802 Length: 681 # NCBI annotation: hypothetical protein predicted by GeneMark # Family: family:all:780 # MgeID: mge:1673 # MgeName: BIP-1 # Cross-refs: genbank:acc:NP_996623;genbank:gi:45580757;genbank:GeneID:2767878 Probab=99.66 E-value=9.1e-14 Score=92.07 Aligned_cols=615 Identities=16% Similarity=0.184 Sum_probs=285.7 Q ss_pred CchhhhhhhhccccceeeeccchhcCC-------CCccccceeeeeccccchhhhhcceeec----CCce-eecceeecc Q lcl|Aclame:pro 1 MAKTTNAAEFNTFVGGLITEASPLTFP-------QNASIDEVNFILNRDGSRNRRNGMDFEN----GATK-VVCNTLVPA 68 (771) Q Consensus 1 Ma~~~~~~e~ntFv~GliTEan~Lt~P-------~nas~De~N~~L~k~G~r~RR~Gl~~E~----s~~~-~l~~~~~~s 68 (771) |++.. .--+.|-.|= -+|+-+. ++....-+||+...-|--.||-|+-+-. ++.. -|.++.-.+ T Consensus 1 m~~~~--~~~~~f~~Ge---~~p~l~~r~D~~~y~~~~~~~~N~~~~~~G~~~~R~g~~~~~~~~~~~~~~rlipf~~~~ 75 (681) T protein:vir:10 1 MSNVR--VLQRSFGGGE---ISPEMFGRIDDVKYQSGLAICRNFVVKPQGPAENRAGFAFVREVKDSAKKVRLIPFTYSV 75 (681) T ss_pred Cccee--EeeeecCCce---eeeeeccchhHHHHHHHHHHhcCcEEEecCCceecChhHhhhhcCCCCCcEEEEEEEeCC Confidence 99864 3567888884 4555443 2344556899999999999999987543 2211 244444333 Q ss_pred CceeeeeechhhhccCccceeEEEEEEccEEEEEecCCcee-eheeeEeeecceeCCC---c--ceeeEEeeEEEEEEcC Q lcl|Aclame:pro 69 DGTIAVTSHNWENAGGEVGRWISLVQVGTELKFFQTTGETL-SEGNFYNYQFVNMSPS---H--KLSYAVVDGLLVVANG 142 (771) Q Consensus 69 ~~~~~vt~~~W~~~~g~v~~~~l~~q~g~~l~~~d~t~~~l-Sn~~l~~~~fv~~sP~---~--~is~~~v~G~lVva~~ 142 (771) .+++ +|.+ -...++||..- ..| .++.. ++ ..+|= + .|+++-..-.++|+.+ T Consensus 76 ~~~~-----------------~l~~-g~~~~r~~~~~-~~~~~~~~~--~~--~~tpy~~~~l~~l~~~q~aD~~~i~h~ 132 (681) T protein:vir:10 76 TQTM-----------------VIEL-GAGYFRFHTNG-GTLLDGAVP--YE--IANPYAEADLFNIHYVQSADVLTLVHP 132 (681) T ss_pred CceE-----------------EEEE-eCCeEEEEeCC-cEEeeCcEe--EE--ecCCCChhhhcCceEEEEcCEEEEECC Confidence 3322 2222 12245566433 333 22221 22 22333 1 4999999999999999 Q ss_pred CcceEEEeccC-CceeeEEEEEEEEEeeeeccccccCcceeccccccCCCccCchhheeeeeccccceeeeeccCCCCcc Q lcl|Aclame:pro 143 SRDIYVFEYDS-GSVSVTTKRLLVRDLFGVQDIVNGVDLRQGNDIATRPTVQTNAHIYNLRNQTFGVPRVTWHSNEPSDP 221 (771) Q Consensus 143 ~~~~~i~~~~~-~s~~~~t~~l~iRd~~~l~d~~~g~~~~~~~~~~~rpttlS~eh~YnL~NqgW~~~~~~~~s~s~~~~ 221 (771) .-|..=|.-.+ ++..+.+.. +..--. ..++ ..+++-...-.|..+-.-+++... ....+.... T Consensus 133 ~~~p~~L~r~~~~~W~l~~~~--f~~~p~-----~p~~--------~~at~~~~~~~~t~~~~v~avda~-t~~~s~~~~ 196 (681) T protein:vir:10 133 NYAPRELRRLGATNWQLATIA--FTSPVA-----TPTS--------VTATSNNKGTDYTYRYVVTALDAE-GKTESAPSS 196 (681) T ss_pred CCcceEEEEccCCceEEEEEE--eccccc-----ccee--------eeeeccCCccceeEeEEEEEeecc-cceeecCCc Confidence 99764443332 222222221 111100 0000 001111111122222222222111 001111111 Q ss_pred eEEEccccccCCcCcchheeeccccccCCCcccccccchhhhhccccccccCCCcce---------EEEeeecCccccee Q lcl|Aclame:pro 222 IVTFRSAASGKFPSNSDSVNLALSKRADVEPSTTDRFRAEDIVLNPIGTYETARGFF---------IIDAMARGKSRLEE 292 (771) Q Consensus 222 vv~~~~~~~G~yPSnaD~~n~~~~~~s~~e~~~~~~F~~~~~~~n~~Gs~~aarG~y---------I~d~~~~~~s~~~~ 292 (771) .++.+. ..|-++. . ...+..|..|-- .+..+ .+.+.-+. T Consensus 197 ~~tvt~---~~~~~~~-~---------------------------~t~~w~a~~g~~~~~V~~~~~gi~g~-ig~~~~~~ 244 (681) T protein:vir:10 197 AGTCTN---NLFTNGG-A---------------------------NTIAWSASSGASRYNVYKEQGGLYGY-IGQTTGTS 244 (681) T ss_pred ceEEee---eeecCCc-c---------------------------eeEEEEecCCceeeeecccceeEEEE-eeccceee Confidence 111100 1111100 0 000111111111 11111 12111111 Q ss_pred eeecccccccccc--eeeecchhhccCCceeeeeecceeEEeeecceeecccccCCcccceeEEEeeecchhhccccccC Q lcl|Aclame:pro 293 IVKLKQRYPSLSF--GVSSLPQDETPGGASVVCEYAGRVWYAGFSGQIIDGDDQSPRLVSYILFSQLVDSPADIVNCYQD 370 (771) Q Consensus 293 ~~~~~~~~p~~~~--~t~~~p~d~~~g~~t~v~~~aGRv~y~g~~~~~~~~~~~~p~~~~yv~fSqli~s~~~lg~CyQ~ 370 (771) ....+.. |.... ...-.|-....|+|+||+=|-+|++++|..+ +|. +|++||.=| |.+ T Consensus 245 ~~~~~~~-~~~~~t~~~~~~~~~~~~gyP~~v~f~q~RL~f~~~~~--------~p~---~v~~Srsgd--------y~n 304 (681) T protein:vir:10 245 LVDDNIA-PDLSVTPPIYDAVFNAAGDYPAAVSYFEQRRCFAGTTN--------KPQ---NIWMTRSGT--------ESA 304 (681) T ss_pred eeecccc-cCccccccccccccccCCCceEEEEEEcceEEEeeCCC--------CCc---EEEEEcccC--------ccc Confidence 1111110 00000 0011233446789999999999999988432 233 799988633 444 Q ss_pred CCCcCchhhhhhhcCCCEEeecC--CCceeEEEeecceeEEEecceEEEEEecccceeeecceeeeeeeeeeecCccceE Q lcl|Aclame:pro 371 GDPTSTEEPELVDTDGGFIRIEG--AHDIINLVNVGSAVMVVAANGIWMIQGGSDYGFTATNYLVTKISEHGCSSPNSVV 448 (771) Q Consensus 371 ~DPts~~~~dl~dtDGG~I~I~g--a~~Iv~mv~~~ssLlVft~nGVWal~G~S~~~fsAt~y~V~KISd~GcvspnSIV 448 (771) =+|.+. +.|+|--.+.+-+ ...|..|++++. |+||+..+-|+|.++.+..+++++-.+.++|..||.+ =.=+ T Consensus 305 F~~~~~----~~ddD~i~~~~~~~~~~~i~~~v~~~~-lli~t~~~e~~l~~~~~~~lTP~~~~~~~~s~~g~~~-~~Pv 378 (681) T protein:vir:10 305 MSYSLP----VRDDDRVAFRVAAREANAIRHIVPLTE-LLLLTSSGEWRVASVNSDAVTPTTISVRPQSYVGATD-VQPV 378 (681) T ss_pred ccccCC----CCCCccEEEEEcCCcceeEEEEEecCc-EEEEEcCcEEEEecCCCccccceeEEEEEeeeecccc-ccce Confidence 455442 3477766665544 356999999975 9999999999999877779999999999999999954 4567 Q ss_pred EeCCeEEEEecCc--eEEeccc-ccCcccccccCchhhhhhhhhcChhHhcceeEEEEeeccEEEEEecccccccccccc Q lcl|Aclame:pro 449 VVDNSFMYWGDDG--IYHLTRN-QYGDYVANNLTEKTIQKYYEKIPSDAILNATGFYDSYDKKVKWLYNTVLDGRTEPVT 525 (771) Q Consensus 449 ~id~aVvYwSDsG--I~~L~~n-e~g~~ss~nLte~tIqt~~~sip~~~k~~~~g~yD~~~~~v~wly~e~~d~~~~y~t 525 (771) .+|++++|.+.+| |+.+..+ +..-+.+++||.. ..-+++.+. -....|..-.+++.|+..+ |.. .+. T Consensus 379 ~vg~~v~fv~~~g~~vre~~y~~~~d~~~~~dlt~~-a~Hl~~~~~-----i~~~a~~~~p~~~~~~v~~--dg~-l~~- 448 (681) T protein:vir:10 379 VVNNTTIYGAARGGHVRELAYNWQANGFVTGDLSLR-AAHLFDNLD-----ILDMAYAKAPQPIVWFISS--SGK-LLG- 448 (681) T ss_pred eeCCeEEEEecCCCEEEEEEEeeecCceeccchhhh-hhhhcCCCC-----eEEEEEecCCCEEEEEEec--CCc-EEE- Confidence 8899999999999 7767777 4566778888853 333333331 1113455666888888753 211 111 Q ss_pred eeEEe--cccccceeeeecceeccceeeeeeeeeeCCc-----eeeecc-----eE--Ee-ecccc--eeeccceeeeee Q lcl|Aclame:pro 526 ELVFD--LALGAFYPSKIGSLTAGRLPIPVGSVKIPPY-----KLVETG-----EE--VT-VASEQ--VTATGELVTVKV 588 (771) Q Consensus 526 ElVf~--L~~~afY~~ki~s~~ags~~~~i~s~~vp~y-----~~~~t~-----~~--V~-v~~~~--vv~~~~~v~~~~ 588 (771) +.++ .+-.||.+|.+ .|....+| + +|.+ +++-.+ +. |+ .+... .-..+.-++.+. T Consensus 449 -~ty~~eq~v~aW~~~~~----~g~v~~v~-~--i~~~~~d~l~~vv~r~~~g~~~~yie~~~~~~~~~~~~~~~vD~~~ 520 (681) T protein:vir:10 449 -LTYVPEQQIGAWHQHDT----DGVFESCA-V--VAEGNEDRLYAVVRRTIGGNEVRYVERMASRQFDAQADAFFVDSGL 520 (681) T ss_pred -EEEecccceeeEEEEec----CCcEEEEE-E--ecCCCCcEEEEEEEecCCCCeEEEEEecCCccccccccceEeeccc Confidence 2222 23349999965 33322221 1 2221 111000 00 00 00000 000011111111 Q ss_pred eeee--------eeeeeeEEEEEEEcCCCceEEEeeecCCchhhccccCC-cccch-hHhhhhhccccccceeeeecceE Q lcl|Aclame:pro 589 STRS--------PVIRETKYIIVEKLSSPMRISFGGYTDEEFVDWKSVDG-IGVDA-PAYLLTGYLAGGDYQREKFVPYI 658 (771) Q Consensus 589 ~~~~--------~~~r~~~y~~~~~~g~~~~~sF~~~~~d~F~Dw~~~~~-~gvd~-~sy~~tgy~~~gd~~r~K~~pyl 658 (771) ++.. .-.-+-+.+.+.-+|... ..+..++ | +-.+. -+.+.-|+.+.-.+. - + T Consensus 521 t~~~~~~~~~sgl~~leG~tv~i~aDG~~~---------~~~~V~~---G~itl~~~~~~v~VGl~Y~s~i~---~---l 582 (681) T protein:vir:10 521 TYSGEPVSHISGLEHLEGKTVSILADGAVH---------PQRVVTD---GAIDLDVEAGTVHIGLPITAELQ---T---L 582 (681) T ss_pred cccCcceeeeccccCCCCcEEEEEeCCeec---------CcEeecC---cEEEeCcCCceEEEeeeceeEEE---e---c Confidence 1110 000123334444333211 1111110 1 00111 112333333321111 1 1 Q ss_pred EEEEeeecceeEecccceEEEcCccceEEEEEEeeccCCCCCcccc-hheeeeeeehcccCCCCcCC--CCcceeeeecc Q lcl|Aclame:pro 659 TFHFKKTEDGFVEDAEGDWTPTNQSSCMVQSQWSWTNSPASNKWGR-TWQAYRFRRHFFPDNIDNQF--DDGNSVVETKS 735 (771) Q Consensus 659 ~~~~~~TEd~~t~d~~g~~~~~n~SScl~~~~w~~s~~~~~~kw~~-~~q~Yr~~r~~~p~~~~~~f--~~~~~VV~TK~ 735 (771) ..++ +++++.. -|.-.+.+ -|.++. -++. +.+-+. ..+.+.++++ -++.+..+- ..| .+. . T Consensus 583 p~~~-~~~~g~~---~g~~~ri~--rv~lr~----~~S~-g~~~~~~~~~l~~~~~~-~~~~~g~~~~l~TG--~~~--v 646 (681) T protein:vir:10 583 PVAM-QLDGSFG---QGRVKNIN--KLWLRV----HRSS-GIFAGPHADALTEVKQR-TSEPYGSPPALKSE--EIP--L 646 (681) T ss_pred ceee-ecCCccc---CCceEEEE--EEEEEE----Eccc-ceEEeeCCCceEEEEEe-ccccccccCCccCC--eEE--E Confidence 2233 3334322 11122221 222222 1111 111110 0122232211 144333321 122 222 2 Q ss_pred ccce-eeeEEEEEEEecCCCceEEEeEEEEEEeec Q lcl|Aclame:pro 736 RLRG-SGKVLSLYITTEPKKNLHIYGWSMLVDVNG 769 (771) Q Consensus 736 ~~RG-~G~~~~~~f~se~~KD~~llG~~~~~~~~g 769 (771) .++| .-+-.+|.+++..-..|+||+-..++.|.| T Consensus 647 ~v~~~~~~~~~v~I~qd~PlP~tvlsi~~ev~vgg 681 (681) T protein:vir:10 647 VLSPKWGDSGQLFVRQADPLPLMIVSMSAEIAIGA 681 (681) T ss_pred EeCCCcCcceEEEEEECCCcCEEEEEeeEEEEeeC Confidence 3554 367788999999999999999999999999 No 12 >protein:vir:8887 Length: 808 # NCBI annotation: tail tubular protein B # Family: family:all:825 # MgeID: mge:161 # MgeName: gh-1 # Cross-refs: genbank:acc:NP_813776;genbank:gi:29366731;genbank:GeneID:1258831 Probab=99.65 E-value=1.1e-13 Score=91.59 Aligned_cols=676 Identities=12% Similarity=0.093 Sum_probs=281.8 Q ss_pred CchhhhhhhhccccceeeeccchhcCCCCccccceeeeeccccchhhhhcceeecCCceeecceeeccCceeeeeechhh Q lcl|Aclame:pro 1 MAKTTNAAEFNTFVGGLITEASPLTFPQNASIDEVNFILNRDGSRNRRNGMDFENGATKVVCNTLVPADGTIAVTSHNWE 80 (771) Q Consensus 1 Ma~~~~~~e~ntFv~GliTEan~Lt~P~nas~De~N~~L~k~G~r~RR~Gl~~E~s~~~~l~~~~~~s~~~~~vt~~~W~ 80 (771) ||+-. --+..|.+| |-.--++-==++.-.+-+||+..--|--+||-|+-+.- ++-.++.. ..+. .+--.+.. T Consensus 1 M~~v~--~s~~n~~~G-vSqq~d~~R~~~q~~~~~N~~~~~~gG~~rRpgt~~v~--~l~~~~~~-~~~~--~~~~~~~~ 72 (808) T protein:vir:88 1 MGLVS--QSVKNLKGG-ISQQPDILRFSNQGALQINGWSSETQGLQKRPPTTFTK--RLQNKGFL-GTKP--LVHLINRD 72 (808) T ss_pred Cccee--eecchhccc-eeccchhHhhhhhhhhhhcceeeeccccccCCchheee--eeeccCCC-CCCc--EEEEEEeC Confidence 99655 457889999 44444443334566778999999888888999976653 11000000 1111 11111111 Q ss_pred hccCccceeEEEEEEccEEEEEecCCceeeheeeEeeecceeCCCcceeeEEeeEEEEEEcCCcceEEEeccC------- Q lcl|Aclame:pro 81 NAGGEVGRWISLVQVGTELKFFQTTGETLSEGNFYNYQFVNMSPSHKLSYAVVDGLLVVANGSRDIYVFEYDS------- 153 (771) Q Consensus 81 ~~~g~v~~~~l~~q~g~~l~~~d~t~~~lSn~~l~~~~fv~~sP~~~is~~~v~G~lVva~~~~~~~i~~~~~------- 153 (771) . .. .++++..+.-+++|+..+.-+.-..-..| .....|...|+++.+.....|+++.-++. +..+. T Consensus 73 ~----~~-~y~v~~~~~~i~v~~~~G~~~~v~~~~~y-~~~~~~~~~l~~~tvaD~~fi~n~~~~~~-~~~~~~~~~~~~ 145 (808) T protein:vir:88 73 A----QE-QYFVGFSGTGLAVWDLKGNNYTVRGYNGY-ANCANPRTDLRLITVADYTFVVNRNTVCQ-MGSTLTHAAYPR 145 (808) T ss_pred c----Cc-eEEEEEeCCeEEEEEcCCceEEEeecCcc-eEecCChhheeEEEEcCEEEEEcCCccee-ecccccccCCCC Confidence 1 12 44555666678888865332211111112 11334555699999999999998776652 21111 Q ss_pred -Cceee---------EEEEEEEEE--------eee-eccccccCcceeccccc------cCCCccCchhheeeee----- Q lcl|Aclame:pro 154 -GSVSV---------TTKRLLVRD--------LFG-VQDIVNGVDLRQGNDIA------TRPTVQTNAHIYNLRN----- 203 (771) Q Consensus 154 -~s~~~---------~t~~l~iRd--------~~~-l~d~~~g~~~~~~~~~~------~rpttlS~eh~YnL~N----- 203 (771) +..+. ++.+|.|-. ... ..+.. ...+-.+...+ ........+++....+ T Consensus 146 ~~~~~~~~vr~g~y~~~y~i~i~g~~s~~~~t~t~~~~~~s-~~~v~~~~~~~~~~~~~~~~~~~ia~~l~~~~~~~~~~ 224 (808) T protein:vir:88 146 LDGRAIINVRGGQYGRTLSITINGDGTGSSPQASIKMPNGS-AEKVPAGDPYAGMNQVDMTDASWIAAELARQLTVSLGG 224 (808) T ss_pred CCccEEEEEcccccCceEEEEEecCCcceeeeEeEEEccCc-ccceeeccceeecccCCccccccchhhheeeeeecccc Confidence 11100 122222210 000 00000 00000000000 0000000111111111 Q ss_pred ccccce---------------eeeeccCC-CCcc-------eEEEccccccCCcCcchheeeccccccCCCcccccccch Q lcl|Aclame:pro 204 QTFGVP---------------RVTWHSNE-PSDP-------IVTFRSAASGKFPSNSDSVNLALSKRADVEPSTTDRFRA 260 (771) Q Consensus 204 qgW~~~---------------~~~~~s~s-~~~~-------vv~~~~~~~G~yPSnaD~~n~~~~~~s~~e~~~~~~F~~ 260 (771) .+|..- ........ .++. -|+--.++...-|-++..... +..+..++-.+=+|+. T Consensus 225 ~~~~~~~~~~~~~i~~~a~~~~~~~~t~~g~~~~~~~~~~~~v~~~~~lp~~~p~g~~v~i~--~~~~~~~~~~yv~~~~ 302 (808) T protein:vir:88 225 SGWSFQAGTGWILINAPANDNVRQIATKDGYADTLLSGFIYQVQTFTKLPANAPPGYLVEIT--GESARSGDNYWVQYDA 302 (808) T ss_pred cceEEEeccceEEEEeccCceeEEEcccCCcCcceeeeeeeeccceeeccccCCCCcEEEEE--ecCCCCCceeEEEEEc Confidence 122111 00000000 0111 011000111111111111000 0111111111112211 Q ss_pred hh-----------hhccccccc-----cCCCcceEEEeeecC--cccceeeeecccccccccceeeecchhhccCCceee Q lcl|Aclame:pro 261 ED-----------IVLNPIGTY-----ETARGFFIIDAMARG--KSRLEEIVKLKQRYPSLSFGVSSLPQDETPGGASVV 322 (771) Q Consensus 261 ~~-----------~~~n~~Gs~-----~aarG~yI~d~~~~~--~s~~~~~~~~~~~~p~~~~~t~~~p~d~~~g~~t~v 322 (771) .. .....-++| .++.|.|+.....-. ..+.. .+.-+|+ + ..+.|++| T Consensus 303 ~~~~w~e~~~~~~~~~~~~~tmp~~lv~~~~~~~~~~~~~w~~r~~Gd~----~tnp~ps----f-------~g~~~~~v 367 (808) T protein:vir:88 303 SGKVWKETAKPKIIAGFNNATLPHALVRAADGQFDWTPLTWDGRNAGDD----DTNPMPS----F-------VGATINDV 367 (808) T ss_pred CCeEEEEeeeccceeeecccceeEEEEecCCceEEEEeccccccccccc----ccCccce----e-------cCCceeEE Confidence 00 000000000 112222322221110 00000 0111111 1 22569999 Q ss_pred eeecceeEEeeecceeecccccCCcccceeEEEeeecchhhccccccCCCCcCchhhhhhhcCCCEEeecC--CCceeEE Q lcl|Aclame:pro 323 CEYAGRVWYAGFSGQIIDGDDQSPRLVSYILFSQLVDSPADIVNCYQDGDPTSTEEPELVDTDGGFIRIEG--AHDIINL 400 (771) Q Consensus 323 ~~~aGRv~y~g~~~~~~~~~~~~p~~~~yv~fSqli~s~~~lg~CyQ~~DPts~~~~dl~dtDGG~I~I~g--a~~Iv~m 400 (771) +=|-+|++++| |. +|++||.=| |.+=.|.+.. .+.|+|--.+.+-+ ...|..| T Consensus 368 ~f~q~RL~f~~------------~~---~v~~Srtgd--------~~nF~~~t~~--~~~DdD~i~~~~~~~~~~~i~~~ 422 (808) T protein:vir:88 368 FFFRNRLGFLS------------GE---NVVMSRTSK--------YFNFFPSSVA--TLSDDDPIDVAISHNRISILKYA 422 (808) T ss_pred EEEcceEEEee------------CC---eEEEEeccC--------cccccCCccc--CCCCCccEEEEecCCccceeeEE Confidence 99999999977 22 699988633 4444455433 66788877776654 3568889 Q ss_pred EeecceeEEEecceEEEEEecccceeeecceeeeeeeeeeecCccceEEeCCeEEEEecCc----eEEe-ccc-ccCccc Q lcl|Aclame:pro 401 VNVGSAVMVVAANGIWMIQGGSDYGFTATNYLVTKISEHGCSSPNSVVVVDNSFMYWGDDG----IYHL-TRN-QYGDYV 474 (771) Q Consensus 401 v~~~ssLlVft~nGVWal~G~S~~~fsAt~y~V~KISd~GcvspnSIV~id~aVvYwSDsG----I~~L-~~n-e~g~~s 474 (771) +++++.|++||..+-|.|.|+ ..++.++-.+.++|..+|.+.=.-+.+|++++|.+.+| |++. ..+ +..-+. T Consensus 423 v~~~~~L~i~T~~~e~~l~~~--~~lTP~~~~~~~~s~~~~~~~~~Pv~vG~~v~f~~~~g~~~~v~r~~~~~~~~d~y~ 500 (808) T protein:vir:88 423 VPFSEQLLLWSDQAQFVLSSK--TILSSKTIELDLTTEFDVSDGARPYGIGRGVYFAAPRASFTSLKRYYAIQDVSDVKS 500 (808) T ss_pred eecCCcEEEEecCcEEEEeCC--CcccceeEEEEEEEEecccCCCCceEeCCeEEEEecCCCeeEEEEEEEeeeccCcee Confidence 999999999999999999874 47999999999999999999888999999999999998 4453 323 455566 Q ss_pred ccccCchhhhhhhhhcChhHhccee--EEEEeeccEEEEEecccccccccccceeEE---ecccccceeeeecceeccce Q lcl|Aclame:pro 475 ANNLTEKTIQKYYEKIPSDAILNAT--GFYDSYDKKVKWLYNTVLDGRTEPVTELVF---DLALGAFYPSKIGSLTAGRL 549 (771) Q Consensus 475 s~nLte~tIqt~~~sip~~~k~~~~--g~yD~~~~~v~wly~e~~d~~~~y~tElVf---~L~~~afY~~ki~s~~ags~ 549 (771) +++||.. ++.|..+ ... ..+-.-+..+.|.-. +.+..+.=+++. +..-.||.+|.+.+.. ... T Consensus 501 ~~dlt~~-~~h~~~~-------~~~~~~~~~~~~~~~v~~~~---~~g~l~~~~y~~~~~e~~v~aW~r~~~~g~~-~~~ 568 (808) T protein:vir:88 501 AEDVSAH-VPSYITN-------TVHAIHGSGTENFVSILSDG---SPNKVFIYKFLYLDEILQQQSFSHWEFGDAA-TTR 568 (808) T ss_pred hhhHHHH-HHHhcCC-------CeEEEEEeCCCCeEEEEEEc---CCCEEEEEEEeccCCceeEEeeEEEecCCCe-eEE Confidence 8877765 4444432 221 122122334556543 122111100111 2223599999774411 111 Q ss_pred eeeeeeeeeCCceeeecce-----EEeecccceee----ccceeeeeeeee--------------------eeeeeeeEE Q lcl|Aclame:pro 550 PIPVGSVKIPPYKLVETGE-----EVTVASEQVTA----TGELVTVKVSTR--------------------SPVIRETKY 600 (771) Q Consensus 550 ~~~i~s~~vp~y~~~~t~~-----~V~v~~~~vv~----~~~~v~~~~~~~--------------------~~~~r~~~y 600 (771) ...+....==.|-+++-.- ++....+.... ...-++.+.+.. .....+... T Consensus 569 ~~~~~~~~d~l~~vV~r~~~~~ler~~~~~~~~~~~~~~~~~~lD~~~~~~~g~~~~~~~~t~~~~~~~~~~~~~~~~~~ 648 (808) T protein:vir:88 569 VLAASCIGSYCYLMIDRPEGLCLERMEFTQHTIDYSIEPYRTYMDMKKTIVLGAYNIDTNLTSFDVRTAYGGTPGPESTF 648 (808) T ss_pred EEEEeccCCEEEEEEEcCCcEEEEEEeeccCCCCCccccceeeeeeeeeeccccccCccccceeecccccccccccceeE Confidence 1111111100111222111 00000000000 000011111100 000011122 Q ss_pred EEEEEcCCCceEEEeeecCCchhhccccCCccc--chhH-hhhhhccccccceeeeecceEEEEEeeecceeEecccceE Q lcl|Aclame:pro 601 IIVEKLSSPMRISFGGYTDEEFVDWKSVDGIGV--DAPA-YLLTGYLAGGDYQREKFVPYITFHFKKTEDGFVEDAEGDW 677 (771) Q Consensus 601 ~~~~~~g~~~~~sF~~~~~d~F~Dw~~~~~~gv--d~~s-y~~tgy~~~gd~~r~K~~pyl~~~~~~TEd~~t~d~~g~~ 677 (771) ..+..+|.- .......|....-+.+ |.++ -+.-|+.+.-.+ --+..+++ +++| .+.- T Consensus 649 ~~~~~dg~~--------~~~~~~~~~~~~~~~~~~~~~~~~v~vGl~y~s~~------~~~p~~~~-~~~g-----~~~~ 708 (808) T protein:vir:88 649 YTIDQQGVL--------IEHEARDWATNPYISFVGNRAGEQMVIGKQYTFQY------EFSKFLIK-QTAD-----DGST 708 (808) T ss_pred EEEcCCceE--------EeeecccccCcceEEeCCCccCceEEEeeeeeEEE------EecceEEe-cCCC-----Ccce Confidence 222211110 1112223322000000 0100 122222222111 11112222 2121 1111 Q ss_pred -EEcCccceEEEEEEeeccCCCCC---cccchheeeee--eehcccCCCCcCCCCcceeeeeccccceeeeEEEEEEEec Q lcl|Aclame:pro 678 -TPTNQSSCMVQSQWSWTNSPASN---KWGRTWQAYRF--RRHFFPDNIDNQFDDGNSVVETKSRLRGSGKVLSLYITTE 751 (771) Q Consensus 678 -~~~n~SScl~~~~w~~s~~~~~~---kw~~~~q~Yr~--~r~~~p~~~~~~f~~~~~VV~TK~~~RG~G~~~~~~f~se 751 (771) +.+.-.-.+-++..++-+++.-. +.++..-.|.+ +|.-.|+ +...-......+ +..++|..+-.+|+++++ T Consensus 709 ~~~~~gr~~l~r~~~~~~~tg~~~v~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~tg~~--~vp~~~~~~~~~v~i~~d 785 (808) T protein:vir:88 709 STEDIGRLQLRRAWLNYEESGAFEINVNNGSSEFVYVMTGGRLGIQR-VLGELSVGTGQF--KFPVTGNAVNQRVTITSS 785 (808) T ss_pred eecccceEEEEEEEEEeecccceEEEeCCCcccceeeccCcccCccc-ccCccccccceE--EEEecccCceeEEEEEEC Confidence 11111112334455555443211 11111112221 2211121 111101001111 345789999999999999 Q ss_pred CCCceEEEeEEEEEEeecCC Q lcl|Aclame:pro 752 PKKNLHIYGWSMLVDVNGTV 771 (771) Q Consensus 752 ~~KD~~llG~~~~~~~~g~~ 771 (771) .-..|+||+.+.+.+.+=.= T Consensus 786 ~P~P~tilsi~~eg~y~~r~ 805 (808) T protein:vir:88 786 NPNPLNVIGCGWEGNYIRRS 805 (808) T ss_pred CCCceEEEEEEEEEEEeccc Confidence 99999999988877765443 No 13 >protein:vir:7329 Length: 825 # NCBI annotation: hypothetical protein # Family: family:all:780 # MgeID: mge:143 # MgeName: epsilon15 # Cross-refs: genbank:acc:NP_848220;genbank:gi:30387391;genbank:GeneID:2641863 Probab=99.65 E-value=2e-14 Score=95.72 Aligned_cols=612 Identities=15% Similarity=0.172 Sum_probs=263.9 Q ss_pred CchhhhhhhhccccceeeeccchhcCC-------CCccccceeeeeccccchhhhhcceeec-----CCceeecceeecc Q lcl|Aclame:pro 1 MAKTTNAAEFNTFVGGLITEASPLTFP-------QNASIDEVNFILNRDGSRNRRNGMDFEN-----GATKVVCNTLVPA 68 (771) Q Consensus 1 Ma~~~~~~e~ntFv~GliTEan~Lt~P-------~nas~De~N~~L~k~G~r~RR~Gl~~E~-----s~~~~l~~~~~~s 68 (771) |+++.-+. .|-.| |-+|+-+. ++....-+||+...-|--+||-|+-+-. .+...|.++..-. T Consensus 1 m~~~~~q~---sF~~G---ElsP~l~gR~Dl~~y~~g~~~~~N~~~~p~Gg~~rRpGt~fva~~~~~~~~~rLipF~fs~ 74 (825) T protein:vir:73 1 MAFSWIQP---SFAGG---EIGPSLYGRIDMSKYQVALRKCDNFIVRQYGGVENRPGTRFVGPAKYPDRKCRLIPFQFST 74 (825) T ss_pred Cccceecc---ccccc---eechhhcccchHHHHHHHHHHhcCcEEEecCCceecCchHHhHhhcCCCCCEEEEEEEeCC Confidence 99997764 66667 55666554 3466678999999999999999987532 1122333332222 Q ss_pred CceeeeeechhhhccCccceeEEEEEEccEEEEEecCCcee-eheeeEeeecceeCCC---c--ceeeEEeeEEEEEEcC Q lcl|Aclame:pro 69 DGTIAVTSHNWENAGGEVGRWISLVQVGTELKFFQTTGETL-SEGNFYNYQFVNMSPS---H--KLSYAVVDGLLVVANG 142 (771) Q Consensus 69 ~~~~~vt~~~W~~~~g~v~~~~l~~q~g~~l~~~d~t~~~l-Sn~~l~~~~fv~~sP~---~--~is~~~v~G~lVva~~ 142 (771) . .-.+|.+. ...++||.+- .+| +++.. -++ ..+|= + .|+++.....+.|+++ T Consensus 75 ~-----------------q~y~Lefg-~~~lrv~~~g-g~v~~~~~~-~~e--~~TPy~~~~l~~l~~~QsaD~~~i~h~ 132 (825) T protein:vir:73 75 V-----------------QTYALEFG-HNYMRVIKDG-AYVLTTSNV-IYE--LAMPYADTDLFRIKFTQSADVLTLVHP 132 (825) T ss_pred C-----------------cEEEEEEe-CCeEEEEeCC-ceEeccCCc-eEE--EecccchhhhhhheeeeecCEEEEEcC Confidence 1 22455554 4456777664 444 33321 122 22332 1 5899999999999999 Q ss_pred CcceEEEeccCCc-eeeEEEEEEEEEeeeeccccccCcceeccc-----cccCCC------ccCchh---heeeeec-cc Q lcl|Aclame:pro 143 SRDIYVFEYDSGS-VSVTTKRLLVRDLFGVQDIVNGVDLRQGND-----IATRPT------VQTNAH---IYNLRNQ-TF 206 (771) Q Consensus 143 ~~~~~i~~~~~~s-~~~~t~~l~iRd~~~l~d~~~g~~~~~~~~-----~~~rpt------tlS~eh---~YnL~Nq-gW 206 (771) .-|++-+...++. -...+. .++. .+ ....+++...- .....+ ....+| ...+.+. -| T Consensus 133 ~~pp~~L~r~~~~~W~l~~~--~f~~----gp-~~~in~~~sv~v~asg~tg~~TiTaS~a~~~~~~vG~~i~~~~~~v~ 205 (825) T protein:vir:73 133 AYPPKELRRYAHDNWQIVDV--TTKN----GP-FEDINVDETVKVYASASTGTITLTASSAIFGAEQVGKLFYLEQPAVD 205 (825) T ss_pred CCceeEEEEecCCCcEEEEE--eccC----Cc-cccccccccceeeecccCceeEEEeeccccCchhcCeEEEEeccccc Confidence 9987666555542 122222 1211 10 00001100000 000000 000111 0011100 11 Q ss_pred cceeeeeccCCCCcceEEEccc-----c---ccCC-cCcch-heeeccccccCCCcccccccchhhhhccccccccCCCc Q lcl|Aclame:pro 207 GVPRVTWHSNEPSDPIVTFRSA-----A---SGKF-PSNSD-SVNLALSKRADVEPSTTDRFRAEDIVLNPIGTYETARG 276 (771) Q Consensus 207 ~~~~~~~~s~s~~~~vv~~~~~-----~---~G~y-PSnaD-~~n~~~~~~s~~e~~~~~~F~~~~~~~n~~Gs~~aarG 276 (771) ..+.-+......-++++.+... . .|.. |+..+ ..+-+..... .+.......-.....| T Consensus 206 si~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~t~~~~a~~g~~~~~~~g~~------------~~~~~~~~~~~~~~~g 273 (825) T protein:vir:73 206 SVPVWETSKTTAINDVRRADSNYYRANTSGKTGTLRPSHTEGMSWDGWGGTG------------SDDTGIQWEYLHSGFG 273 (825) T ss_pred ccceeeeeeEEEeeeEEECCCceeeeecccccceeeccccCCceeEeeeeec------------ccCCceEEEEEecCCc Confidence 1111100000000111100000 0 0000 01100 0000000000 0000000000000011 Q ss_pred ceEEEeeecCcccceeee-ecccccccccceeee------cchhhccCCceeeeeecceeEEeeecceeecccccCCccc Q lcl|Aclame:pro 277 FFIIDAMARGKSRLEEIV-KLKQRYPSLSFGVSS------LPQDETPGGASVVCEYAGRVWYAGFSGQIIDGDDQSPRLV 349 (771) Q Consensus 277 ~yI~d~~~~~~s~~~~~~-~~~~~~p~~~~~t~~------~p~d~~~g~~t~v~~~aGRv~y~g~~~~~~~~~~~~p~~~ 349 (771) -.-|...... ..+... ...-.++.....+.+ .+-..+.|.|++|+=|-+|++++|. +.+|. T Consensus 274 ~~~it~~~~~--~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~~gyPs~v~f~q~RL~f~g~--------~~~p~-- 341 (825) T protein:vir:73 274 IAKITAVAGD--GLTATADVVSFIPSQVVGSANASYKWAKYAWNSVNGYPSTVVYYQQRLYFAAS--------TAYPQ-- 341 (825) T ss_pred eEEEeecccc--ceeeccccceecccccccCCCCCcccccCCcccCCCCccEEEEEcceEEEeec--------CCCCC-- Confidence 1111111000 000000 000000111111111 1334567899999999999999884 33344 Q ss_pred ceeEEEeeecchhhccccccCCCCcCchhhhhhhcCCCEEeecCC--CceeEEEeecceeEEEecceEEEEEecccceee Q lcl|Aclame:pro 350 SYILFSQLVDSPADIVNCYQDGDPTSTEEPELVDTDGGFIRIEGA--HDIINLVNVGSAVMVVAANGIWMIQGGSDYGFT 427 (771) Q Consensus 350 ~yv~fSqli~s~~~lg~CyQ~~DPts~~~~dl~dtDGG~I~I~ga--~~Iv~mv~~~ssLlVft~nGVWal~G~S~~~fs 427 (771) +|++||.=| |.+=.|.++ |.|+|.-.+.+-+. +.|.+|++++ .|++||..+-|.|.|+++..++ T Consensus 342 -~v~~Srtgd--------~~nF~~~~~----~~DdD~I~~~~s~~~~~~i~~~~~~~-~L~~~t~~~e~~l~~~~~~~lT 407 (825) T protein:vir:73 342 -TIWASRTGD--------YKDFGKNNP----IQDDDRIIYTYAGRQVNEIRHLIDVG-NLVALTSGGEYTISGDQNKVLT 407 (825) T ss_pred -EEEEEccCC--------ccccccCCC----CCCCccEEEEEcCCcceeEEEEeecC-cEEEEecCceEEEecCCCcccc Confidence 799987533 555566663 55888877777665 5588999996 7999999999999998888999 Q ss_pred ecceeeeeeeeeeecCccceEEeCCeEEEEecCc--eEEecccc-cCcccccccCchhhhhhhhhcChhHhcceeEEEEe Q lcl|Aclame:pro 428 ATNYLVTKISEHGCSSPNSVVVVDNSFMYWGDDG--IYHLTRNQ-YGDYVANNLTEKTIQKYYEKIPSDAILNATGFYDS 504 (771) Q Consensus 428 At~y~V~KISd~GcvspnSIV~id~aVvYwSDsG--I~~L~~ne-~g~~ss~nLte~tIqt~~~sip~~~k~~~~g~yD~ 504 (771) +++-.+.++|..||.+ =.=+.+|++++|.+..| |+.+..+. ..-+.+++||.. ++.+++.. ......|.. T Consensus 408 P~~~~~~~~s~~g~~~-~~Pv~vg~~~~Fv~~~g~~vre~~~~~~~d~~~~~dlt~~-a~hl~~~~-----~~~~~a~~~ 480 (825) T protein:vir:73 408 PSAFSFSSQGNNGSSN-VPPIAVANIALFIQEKGSVVRDLAYSFDVDGYQGTDLTIL-ANHLFQKH-----SIVDWSFCI 480 (825) T ss_pred eeeEEEEeeeeecccc-ccceEeCCeEEEEeCCCCeEEEEEEeeecCceeccchhhh-hHhhccCC-----ceEEEEEcC Confidence 9999999999999965 45678899999999998 88888883 566778888854 33333321 222345555 Q ss_pred eccEEEEEecccccccccccceeEEecccccceeeeecceeccceeeeeeeeeeCCceeeecceEEeecccceeecccee Q lcl|Aclame:pro 505 YDKKVKWLYNTVLDGRTEPVTELVFDLALGAFYPSKIGSLTAGRLPIPVGSVKIPPYKLVETGEEVTVASEQVTATGELV 584 (771) Q Consensus 505 ~~~~v~wly~e~~d~~~~y~tElVf~L~~~afY~~ki~s~~ags~~~~i~s~~vp~y~~~~t~~~V~v~~~~vv~~~~~v 584 (771) ...++.|+..+ |. ..+.=.+.-+.+--||.+|.+ .|....+|. +|.. T Consensus 481 ~p~~~~~~v~~--dg-~l~~~ty~~~q~v~aW~~~~~----~g~v~~~~~---i~~~----------------------- 527 (825) T protein:vir:73 481 VPYSSAFCIRD--DG-KLLVLTYLRDQQVFAWAPQSS----AGKYESTCS---ISEG----------------------- 527 (825) T ss_pred CCceEEEEEec--CC-eEEEEEEeccccceeeEEEec----CCcEEEEEE---ecCC----------------------- Confidence 55788888754 21 121111222333348888855 333221111 2221 Q ss_pred eeeeeeeeeeeeeeEEEEEEEc--CCCceEEEeeecCCchhhccccCCcccchhHhhhhhccccccceeeeecceEEEE- Q lcl|Aclame:pro 585 TVKVSTRSPVIRETKYIIVEKL--SSPMRISFGGYTDEEFVDWKSVDGIGVDAPAYLLTGYLAGGDYQREKFVPYITFH- 661 (771) Q Consensus 585 ~~~~~~~~~~~r~~~y~~~~~~--g~~~~~sF~~~~~d~F~Dw~~~~~~gvd~~sy~~tgy~~~gd~~r~K~~pyl~~~- 661 (771) ..|..|+++++. |...+.- --+....|.|. .| .-|+++|-.+-|.-. ...+.+|--. T Consensus 528 ----------~~D~l~~iV~R~~~g~~~~yi-E~~~~~~~~~~-------~~-~~~vD~g~~~~g~~~-~~~l~~l~g~t 587 (825) T protein:vir:73 528 ----------SEDAVYFVVNRTINGQTVRYI-ERLSSRLFTND-------ED-AFFVDCGLSYDGRNT-SSRTMTISGGT 587 (825) T ss_pred ----------CccEEEEEEEEeeCCceEEEE-EEecccccCCC-------cc-eeEEEEEeeecccce-eeceeeeCCce Confidence 011222222221 0000000 00000011111 01 113444333322111 0111111100 Q ss_pred EeeecceeE--ecccceEEEcCccceEEEEEEeeccCCC-CCcccchheeeeeeehcccCCCCcCCCCcceeeeeccccc Q lcl|Aclame:pro 662 FKKTEDGFV--EDAEGDWTPTNQSSCMVQSQWSWTNSPA-SNKWGRTWQAYRFRRHFFPDNIDNQFDDGNSVVETKSRLR 738 (771) Q Consensus 662 ~~~TEd~~t--~d~~g~~~~~n~SScl~~~~w~~s~~~~-~~kw~~~~q~Yr~~r~~~p~~~~~~f~~~~~VV~TK~~~R 738 (771) -..+-||.+ .-.+|..+..++.. .++.-.++-... .+.-..+-.-++..|. + T Consensus 588 v~~~~~g~~~~~v~~g~itl~~~~~--~~i~l~~~~~~~~~~~~~~~~~~~~i~~~---------------~-------- 642 (825) T protein:vir:73 588 GDWSYQVDYPVTVSGGAYFVNTDVG--AQIQFPYTGTDPDTNEPVAKELRGDIISV---------------T-------- 642 (825) T ss_pred EEEEeCCeEEEEEcCCeEEecccce--EEEEecccCcccccccceeceeeEEEccc---------------c-------- Confidence 001111111 00123333333322 222211111000 0000000000111110 0 Q ss_pred eeeeEEEEEEEecC-C--Cce----------------EEEeEEEEEEeecCC Q lcl|Aclame:pro 739 GSGKVLSLYITTEP-K--KNL----------------HIYGWSMLVDVNGTV 771 (771) Q Consensus 739 G~G~~~~~~f~se~-~--KD~----------------~llG~~~~~~~~g~~ 771 (771) .++++++++..+- - .|| ||=|=+|.+-..|.| T Consensus 643 -~~~~v~v~~~~~~~a~~~~~~~t~~~~a~~~~~gL~hLeG~~v~v~~Dg~~ 693 (825) T protein:vir:73 643 -SNTAVVVRFNRNVPPVLRNVATTNWQMARQTFSGLAHLEGQTVNILSDASV 693 (825) T ss_pred -CceEEEEEecccccceeeeecccCCCcchheeccccccCCceEEEEECCee Confidence 1233333332111 0 122 444445555555666 No 14 >protein:vir:2203 Length: 794 # NCBI annotation: tail tubular protein B # Family: family:all:825 # MgeID: mge:49 # MgeName: T7 # Cross-refs: genbank:acc:NP_042000;swissprot:sw:p03747;genbank:gi:9627472;uniprot:P03747;genbank:GeneID:1261024 Probab=99.63 E-value=2.3e-13 Score=89.90 Aligned_cols=655 Identities=13% Similarity=0.143 Sum_probs=276.7 Q ss_pred CchhhhhhhhccccceeeeccchhcCCCCccccceeeeeccccchhhhhcceeecCCceeecceeeccCceeeeeechhh Q lcl|Aclame:pro 1 MAKTTNAAEFNTFVGGLITEASPLTFPQNASIDEVNFILNRDGSRNRRNGMDFENGATKVVCNTLVPADGTIAVTSHNWE 80 (771) Q Consensus 1 Ma~~~~~~e~ntFv~GliTEan~Lt~P~nas~De~N~~L~k~G~r~RR~Gl~~E~s~~~~l~~~~~~s~~~~~vt~~~W~ 80 (771) ||+-.+ -+..|.+| |-+--+|.==++.-..-+||+...-|--+||-|+.+... |.+.-.+..+.++. - .+ T Consensus 1 M~~i~~--s~~n~~~G-vSqq~D~~ry~~q~~~~~N~~~~~~gG~~rRpG~~fv~~----l~~~~~~~~~~~l~-~--~~ 70 (794) T protein:vir:22 1 MALISQ--SIKNLKGG-ISQQPDILRYPDQGSRQVNGWSSETEGLQKRPPLVFLNT----LGDNGALGQAPYIH-L--IN 70 (794) T ss_pred Cceeee--ecchhhcc-cccCCchHHhhhHHhhhhcceeeccCCceeCCchHhhhh----hcccCCCCCccEEE-E--EE Confidence 997654 45788999 554444433345566789999999999999999877531 00000111111111 0 10 Q ss_pred hccCccceeEEEEEEccEEEEEecCCceee---heeeEeeecceeCCCcceeeEEeeEEEEEEcCCcceEEEeccCCc-- Q lcl|Aclame:pro 81 NAGGEVGRWISLVQVGTELKFFQTTGETLS---EGNFYNYQFVNMSPSHKLSYAVVDGLLVVANGSRDIYVFEYDSGS-- 155 (771) Q Consensus 81 ~~~g~v~~~~l~~q~g~~l~~~d~t~~~lS---n~~l~~~~fv~~sP~~~is~~~v~G~lVva~~~~~~~i~~~~~~s-- 155 (771) .. ....-+ ++.-+..|++|+..+.-+. ++. ..|- ....|...|+++.+...+.|+++.-++.-+..-..+ T Consensus 71 ~~--~~~~y~-l~~~~~~irv~~~~G~~~~v~~~~~-~~y~-~~~~~~~~l~~~q~aD~~fi~~~~~~p~~~~~~~~~~~ 145 (794) T protein:vir:22 71 RD--EHEQYY-AVFTGSGIRVFDLSGNEKQVRYPNG-SNYI-KTANPRNDLRMVTVADYTFIVNRNVVAQKNTKSVNLPN 145 (794) T ss_pred eC--CCcEEE-EEEcCCeEEEEecCCcEEEeecCCC-ccce-ecCCCcccEEEEEEcCEEEEEcCCeeeeEeeccccCCC Confidence 00 111122 3334555888877543221 110 1121 012233459999999999999999876544432221 Q ss_pred -----eee---------EEEEEEEEEeeeeccccccCcceeccccccCCCccCchhhee-------------eeec--cc Q lcl|Aclame:pro 156 -----VSV---------TTKRLLVRDLFGVQDIVNGVDLRQGNDIATRPTVQTNAHIYN-------------LRNQ--TF 206 (771) Q Consensus 156 -----~~~---------~t~~l~iRd~~~l~d~~~g~~~~~~~~~~~rpttlS~eh~Yn-------------L~Nq--gW 206 (771) .++ ++..+.|. |...-. .+-|..-+..+..+ |++. +| T Consensus 146 ~~~~~~g~v~v~~g~y~~ty~v~I~----------~~~~a~----~~~p~gt~~~~~~~~~~~~ia~~L~~~l~~~~~~~ 211 (794) T protein:vir:22 146 YNPNQDGLINVRGGQYGRELIVHIN----------GKDVAK----YKIPDGSQPEHVNNTDAQWLAEELAKQMRTNLSDW 211 (794) T ss_pred CCCCceEEEEccCCccceeEEEEec----------cCcceE----EEEcCCCccccceeechhhhhhhhhhhheeccccc Confidence 111 12222221 111100 01111111111111 2221 22 Q ss_pred cceeeeeccCCCCcce-EEEccccccCCcCcchheeeccccccCCCcccccccchhhhhcccccc--ccCCCcceEEEee Q lcl|Aclame:pro 207 GVPRVTWHSNEPSDPI-VTFRSAASGKFPSNSDSVNLALSKRADVEPSTTDRFRAEDIVLNPIGT--YETARGFFIIDAM 283 (771) Q Consensus 207 ~~~~~~~~s~s~~~~v-v~~~~~~~G~yPSnaD~~n~~~~~~s~~e~~~~~~F~~~~~~~n~~Gs--~~aarG~yI~d~~ 283 (771) .... .+..+ ++ -|++ ...+..-.++....... .+..-..+.+.+ ..++.| |++++. T Consensus 212 t~~~-------~~~~~~i~--------a~~~-~~~~~~t~~~g~~~t~~----~~~~~~~~~~~~lp~~~~~G-~~v~i~ 270 (794) T protein:vir:22 212 TVNV-------GQGFIHVT--------APSG-QQIDSFTTKDGYADQLI----NPVTHYAQSFSKLPPNAPNG-YMVKIV 270 (794) T ss_pred eEEe-------CCceEEEE--------EcCC-ceEEEEeeecccCccee----EEEEeccccceeccccCCCC-eEEEEE Confidence 1110 00000 00 0000 00000000000000000 000000000000 001111 233322 Q ss_pred ecCcccc--------------e------------------eee-eccccccccc--------ceeeecchhhc-cCCcee Q lcl|Aclame:pro 284 ARGKSRL--------------E------------------EIV-KLKQRYPSLS--------FGVSSLPQDET-PGGASV 321 (771) Q Consensus 284 ~~~~s~~--------------~------------------~~~-~~~~~~p~~~--------~~t~~~p~d~~-~g~~t~ 321 (771) +-+++.. . .++ +...++..+. +-..+.|..-- -..|++ T Consensus 271 ~~~~~~~~~Y~v~~~~~~~~w~e~~~~~~~~~~~~~t~p~~lv~~~~~~~~~~~~~w~~r~~Gd~~tnp~psf~g~~i~~ 350 (794) T protein:vir:22 271 GDASKSADQYYVRYDAERKVWTETLGWNTEDQVLWETMPHALVRAADGNFDFKWLEWSPKSCGDVDTNPWPSFVGSSIND 350 (794) T ss_pred eCCCCCcceeEEEEeccceEEEEeeeccceeeecccceeeEeeeccCCcEEEeeccccccccCccccCCcceecCCCcce Confidence 2221110 0 000 1111111000 00001111111 123589 Q ss_pred eeeecceeEEeeecceeecccccCCcccceeEEEeeecchhhccccccCCCCcCchhhhhhhcCCCEEeecC--CCceeE Q lcl|Aclame:pro 322 VCEYAGRVWYAGFSGQIIDGDDQSPRLVSYILFSQLVDSPADIVNCYQDGDPTSTEEPELVDTDGGFIRIEG--AHDIIN 399 (771) Q Consensus 322 v~~~aGRv~y~g~~~~~~~~~~~~p~~~~yv~fSqli~s~~~lg~CyQ~~DPts~~~~dl~dtDGG~I~I~g--a~~Iv~ 399 (771) |+=|-+|+++++ |. +|++||.=| |.+=+|++. ..+.|+|--.+.+-+ ...|.. T Consensus 351 v~f~q~RL~f~~------------~~---~v~~Srtgd--------~~nF~~~t~--~~~~DdD~i~~~~ss~~~~~i~~ 405 (794) T protein:vir:22 351 VFFFRNRLGFLS------------GE---NIILSRTAK--------YFNFYPASI--ANLSDDDPIDVAVSTNRIAILKY 405 (794) T ss_pred EEEEcceEEEec------------CC---eEEEEccCC--------ccccccccC--cCCCCCccEEEEecCCcceeeEE Confidence 999999999976 22 699988522 233455542 266788877777665 567889 Q ss_pred EEeecceeEEEecceEEEEEecccceeeecceeeeeeeeeeecCccceEEeCCeEEEEecCc----eEEecc-c-ccCcc Q lcl|Aclame:pro 400 LVNVGSAVMVVAANGIWMIQGGSDYGFTATNYLVTKISEHGCSSPNSVVVVDNSFMYWGDDG----IYHLTR-N-QYGDY 473 (771) Q Consensus 400 mv~~~ssLlVft~nGVWal~G~S~~~fsAt~y~V~KISd~GcvspnSIV~id~aVvYwSDsG----I~~L~~-n-e~g~~ 473 (771) |++++..|+|||..+-|.|.|+ + .++.++-.+.++|..+|.+.=.=+.+|++++|.+.+| |++... + +..-. T Consensus 406 ~v~~~~~L~i~t~~~e~~l~~~-~-~lTP~~~~~~~~s~~~~~~~~~Pv~vg~~v~f~~~~g~~~~~~r~~~~~~~~d~y 483 (794) T protein:vir:22 406 AVPFSEELLIWSDEAQFVLTAS-G-TLTSKSVELNLTTQFDVQDRARPFGIGRNVYFASPRSSFTSIHRYYAVQDVSSVK 483 (794) T ss_pred EeecCCcEEEEecCcEEEEeCC-C-cccceeEEEEEEEEeeccCCCCceEeCCeEEEEecCCCeeEEEEeEeeecccCce Confidence 9999999999999999999763 3 8999999999999999988888899999999999998 555433 2 24555 Q ss_pred cccccCchhhhhhhhhcChhHhccee--EEEEeeccEEEEEecccccccccccceeEE---ecccccceeeeecceeccc Q lcl|Aclame:pro 474 VANNLTEKTIQKYYEKIPSDAILNAT--GFYDSYDKKVKWLYNTVLDGRTEPVTELVF---DLALGAFYPSKIGSLTAGR 548 (771) Q Consensus 474 ss~nLte~tIqt~~~sip~~~k~~~~--g~yD~~~~~v~wly~e~~d~~~~y~tElVf---~L~~~afY~~ki~s~~ags 548 (771) .+++||.. ++.|. +.... ..+-.-+..+.|.-. +.+..+.=+++. +..-.||.+|.+ .|. T Consensus 484 ~~~Dlt~~-~~~~~-------~~~~~~~~~~~~~~~~v~~~~~---~~~~l~~~~y~~~~~e~~v~aW~~~~~----~g~ 548 (794) T protein:vir:22 484 NAEDITSH-VPNYI-------PNGVFSICGSGTENFCSVLSHG---DPSKIFMYKFLYLNEELRQQSWSHWDF----GEN 548 (794) T ss_pred ehhhHHHH-HHHhc-------CCceEEEEEeCCCCcEEEEEEc---CCCEEEEEEEeecCCceeEEeeEEEEc----CCC Confidence 67777654 33332 22222 112122334545432 222211000110 112469999976 333 Q ss_pred eeeeeeeeeeCCceeeecceEEeecccceeeccceeeeeeeeeeeeeeeeEEEEEEEcCCCceEEE----eeecCCchh- Q lcl|Aclame:pro 549 LPIPVGSVKIPPYKLVETGEEVTVASEQVTATGELVTVKVSTRSPVIRETKYIIVEKLSSPMRISF----GGYTDEEFV- 623 (771) Q Consensus 549 ~~~~i~s~~vp~y~~~~t~~~V~v~~~~vv~~~~~v~~~~~~~~~~~r~~~y~~~~~~g~~~~~sF----~~~~~d~F~- 623 (771) ..++|.. + ..+.--+-|.-.. ++++.-+........+-+..|..- .|..+.| ..|+.+... T Consensus 549 ~~~~~~~---~----~~d~l~~iv~r~~---~~~~~r~~~~~~~~~~~~~~~~~~----lD~~~~~~~~~g~~~~~~~~t 614 (794) T protein:vir:22 549 VQVLACQ---S----ISSDMYVILRNEF---NTFLARISFTKNAIDLQGEPYRAF----MDMKIRYTIPSGTYNDDTFTT 614 (794) T ss_pred EEEEEEE---e----cCCEEEEEEEeCC---CEEEEEEEEeeccccCCCccceee----eeeeEEEeeccceeecCCcce Confidence 2222211 0 0111111111110 111111111111000000000000 0000110 011111000 Q ss_pred --hccccCCcccchhHhhhhhccccc----------------------ccee---eeecceE------EEEEeeecceeE Q lcl|Aclame:pro 624 --DWKSVDGIGVDAPAYLLTGYLAGG----------------------DYQR---EKFVPYI------TFHFKKTEDGFV 670 (771) Q Consensus 624 --Dw~~~~~~gvd~~sy~~tgy~~~g----------------------d~~r---~K~~pyl------~~~~~~TEd~~t 670 (771) ++.. .-|.++..--...+..-| +... ..-.||. ..++++. T Consensus 615 ~~~~~~--~~g~~~~~g~~v~~~~dg~~~~~~~~~~~~~~~~~~~v~~~~~~~~v~VGl~y~s~~~~~~~~~~~~----- 687 (794) T protein:vir:22 615 SIHIPT--IYGANFGRGKITVLEPDGKITVFEQPTAGWNSDPWLRLSGNLEGRMVYIGFNINFVYEFSKFLIKQT----- 687 (794) T ss_pred EEEccc--ccCcccccceEEEEEcCCceeeceeeeeeeeccceEEeCCCCCCcEEEEeeeeeEEEEecceEEEec----- Confidence 0000 001111110011111001 0000 0001111 1112111 Q ss_pred ecccce-EEEcCccceEEEEEEeeccCCCCCc-ccchheeeeee---ehcccCCCC-cCCCCcceeeeeccccceeeeEE Q lcl|Aclame:pro 671 EDAEGD-WTPTNQSSCMVQSQWSWTNSPASNK-WGRTWQAYRFR---RHFFPDNID-NQFDDGNSVVETKSRLRGSGKVL 744 (771) Q Consensus 671 ~d~~g~-~~~~n~SScl~~~~w~~s~~~~~~k-w~~~~q~Yr~~---r~~~p~~~~-~~f~~~~~VV~TK~~~RG~G~~~ 744 (771) +++|. -+.....-.|.++++++.+++.-.= .+++..-++|. +++-+..+. ..-.....++ +--+||..+-. T Consensus 688 -~~~~~~~~~~~grl~l~r~~~~~~~tg~~~v~v~~~~~~~~~~~~~~~~g~~~~~~g~~~~~tg~~--~vp~~~~~~~~ 764 (794) T protein:vir:22 688 -ADDGSTSTEDIGRLQLRRAWVNYENSGTFDIYVENQSSNWKYTMAGARLGSNTLRAGRLNLGTGQY--RFPVVGNAKFN 764 (794) T ss_pred -CCCccceeeecceEEEEEEEEEeccccceEEEEcCCCcccceeecCceecccccccCcccccCceE--EEEecccCceE Confidence 11110 1111222356677777766553110 01111222221 122211111 1101111222 34568999999 Q ss_pred EEEEEecCCCceEEEeEEEEEEeecCC Q lcl|Aclame:pro 745 SLYITTEPKKNLHIYGWSMLVDVNGTV 771 (771) Q Consensus 745 ~~~f~se~~KD~~llG~~~~~~~~g~~ 771 (771) +++++++.--.|+||+-+.+.+.+=.= T Consensus 765 ~v~i~~d~p~P~tvlsi~~eg~y~~r~ 791 (794) T protein:vir:22 765 TVYILSDETTPLNIIGCGWEGNYLRRS 791 (794) T ss_pred EEEEEECCCCCEEEEEEeEEEEEeccc Confidence 999999999999999988776655433 No 15 >protein:vir:10452 Length: 794 # NCBI annotation: tail protein # Family: family:all:825 # MgeID: mge:184 # MgeName: phiA1122 # Cross-refs: genbank:acc:NP_848299;genbank:gi:30387490;genbank:GeneID:1733952 Probab=99.62 E-value=2.4e-13 Score=89.75 Aligned_cols=661 Identities=12% Similarity=0.098 Sum_probs=277.2 Q ss_pred CchhhhhhhhccccceeeeccchhcCCCCccccceeeeeccccchhhhhcceeecCCceeecceeeccCcee-eeeechh Q lcl|Aclame:pro 1 MAKTTNAAEFNTFVGGLITEASPLTFPQNASIDEVNFILNRDGSRNRRNGMDFENGATKVVCNTLVPADGTI-AVTSHNW 79 (771) Q Consensus 1 Ma~~~~~~e~ntFv~GliTEan~Lt~P~nas~De~N~~L~k~G~r~RR~Gl~~E~s~~~~l~~~~~~s~~~~-~vt~~~W 79 (771) ||+-.+ -+..|.+| |-.--++.==++.-..-+||+...-|--+||-|+.+...-. .++... ..-.|-- T Consensus 1 M~~i~~--s~~n~~~G-vSqq~D~~Ry~~q~~~~~N~~~~~~gG~~rRpGt~fv~~l~--------~~~~~~~~~~~~~~ 69 (794) T protein:vir:10 1 MALISQ--SIKNLKGG-ISQQPDILRYPDQGSRQVNGWSSETEGLQKRPPLVFLKTLG--------DNGALGQAPYIHLI 69 (794) T ss_pred Ccceee--ecchhhcc-cccCCchHHhhhhHhhhhcceeeeccCcccCcchhhheecc--------CCCccccceeeeEE Confidence 997654 45788999 55444444334556678999999888889999987654111 111000 0001100 Q ss_pred hhccCccceeEEEEEEccEEEEEecCCceee--heeeEeeecceeCCCcceeeEEeeEEEEEEcCCcceEEEe------- Q lcl|Aclame:pro 80 ENAGGEVGRWISLVQVGTELKFFQTTGETLS--EGNFYNYQFVNMSPSHKLSYAVVDGLLVVANGSRDIYVFE------- 150 (771) Q Consensus 80 ~~~~g~v~~~~l~~q~g~~l~~~d~t~~~lS--n~~l~~~~fv~~sP~~~is~~~v~G~lVva~~~~~~~i~~------- 150 (771) +..+ .. -.+++..+.-+++|+..+..+. +..=+.|. ....|...|+++.+...+.|+++.-++.-.. T Consensus 70 -~rd~-~e-~~~v~~~~~~irv~~~~G~~~~v~~~~~~~Y~-~aa~~~~~l~~~q~aD~~fivn~~~~~~~~~~~~~~~~ 145 (794) T protein:vir:10 70 -NRDE-NE-QYYAVFTGTGIRVFDLAGNEKQVRYPNGSNYI-KTANPRSDLRMVTVADYTFIVNRNVVVQKDPNSVNLAN 145 (794) T ss_pred -ecCC-Cc-eEEEEEeCCeEEEEEcCCcEEEEEcCCCCcce-ecCCCcceEEEEEEcCEEEEEcCCeeeeeeccccccCC Confidence 0011 11 2344556667888886553321 11111121 0112444588888888999988776543100 Q ss_pred ccCCceee---------EEEEEEEEEe----eeeccccccCcceecc-----------ccccC-CCccCch--hhee--- Q lcl|Aclame:pro 151 YDSGSVSV---------TTKRLLVRDL----FGVQDIVNGVDLRQGN-----------DIATR-PTVQTNA--HIYN--- 200 (771) Q Consensus 151 ~~~~s~~~---------~t~~l~iRd~----~~l~d~~~g~~~~~~~-----------~~~~r-pttlS~e--h~Yn--- 200 (771) ++...... ++..|.|... +-..|-+.+....++. ..+.. +-++... .+|. T Consensus 146 ~~~~~~~~~~v~~g~y~r~y~i~i~~~~~at~~tpdgt~~~~~~~~s~~~ia~~L~~~l~a~~~g~t~~~~g~~i~i~a~ 225 (794) T protein:vir:10 146 YNPKQDGLINIRGGQYGRELIVHINGKDVATYKIPDGSKPEHVNNTDAQWLAERLAKQMRINLSGWTVNVGQGFIHVTAP 225 (794) T ss_pred CCCCccEEEEecccccceEEEeccCCcceeEEEecCCCCcccceecchhhhhhhhhhhhhcccCCceEEeCCeEEEEEec Confidence 00001110 1112222111 1111100000000000 00000 0000000 0111 Q ss_pred -------------------------------eeeccc--cceeeeeccCCCCcc-eEEEccccccCCcCcchheeecccc Q lcl|Aclame:pro 201 -------------------------------LRNQTF--GVPRVTWHSNEPSDP-IVTFRSAASGKFPSNSDSVNLALSK 246 (771) Q Consensus 201 -------------------------------L~NqgW--~~~~~~~~s~s~~~~-vv~~~~~~~G~yPSnaD~~n~~~~~ 246 (771) |-.+.| +..+.++..++..+. .++|... .|+ T Consensus 226 s~~~~~t~s~~~~~~~~~~~~v~~~~~~~~~lp~~~~~G~~v~i~~~~~~~~~~yyv~~~~~-~~~-------------- 290 (794) T protein:vir:10 226 SGQQIDSFTTKDGYADQLINPVTHYAQSFSKLPPNAPNGYMVKIVGDASKSADQYYVRYDAE-RKV-------------- 290 (794) T ss_pred cCceeccccccCCcCcceeEEEEeccCcceecccCCCCCcEEEEEeCCCCCcceeEEEEEcC-CcE-------------- Confidence 111111 011111222222221 2222111 111 Q ss_pred ccCCCcccccccchhhhhccccccccCCCcceEEEeeecCc--ccceeeeecccccccccceeeecchhhccCCceeeee Q lcl|Aclame:pro 247 RADVEPSTTDRFRAEDIVLNPIGTYETARGFFIIDAMARGK--SRLEEIVKLKQRYPSLSFGVSSLPQDETPGGASVVCE 324 (771) Q Consensus 247 ~s~~e~~~~~~F~~~~~~~n~~Gs~~aarG~yI~d~~~~~~--s~~~~~~~~~~~~p~~~~~t~~~p~d~~~g~~t~v~~ 324 (771) |.|.......--.+...-|..=..++.|.|.+-...-.. .+..+ .. |-++ +.| ..|++|+= T Consensus 291 --w~E~~~~g~~~~~~~~tmP~~l~r~~~~t~~~~~~~w~~r~~Gd~~----tn--p~ps--f~g-------~~~~~v~f 353 (794) T protein:vir:10 291 --WTETLGWNTENQVLLETMPHALVRAADGNFDFKWLEWSPKSCGDVD----TN--PWPS--FVG-------SSINDVFF 353 (794) T ss_pred --EEEecccceeEEEecccceeEEEEeccceEEeeecccccccccccc----cC--ccCc--ccC-------CCccEEEE Confidence 222111111000000000111111222333322221110 11110 11 1111 112 34789999 Q ss_pred ecceeEEeeecceeecccccCCcccceeEEEeeecchhhccccccCCCCcCchhhhhhhcCCCEEeecC--CCceeEEEe Q lcl|Aclame:pro 325 YAGRVWYAGFSGQIIDGDDQSPRLVSYILFSQLVDSPADIVNCYQDGDPTSTEEPELVDTDGGFIRIEG--AHDIINLVN 402 (771) Q Consensus 325 ~aGRv~y~g~~~~~~~~~~~~p~~~~yv~fSqli~s~~~lg~CyQ~~DPts~~~~dl~dtDGG~I~I~g--a~~Iv~mv~ 402 (771) |-+|+++++ |. +|++||.=| |.+=+|++. ..+.|+|--.+.+-+ ...|..|++ T Consensus 354 ~q~RL~f~~------------~~---~v~~Srtgd--------~~nF~~~t~--~~~~DdD~I~~~~ss~~~~~i~~~v~ 408 (794) T protein:vir:10 354 FRNRLGFLS------------GE---NIILSRTAK--------YFNFYPASI--ANLSNDDPIDVAVSTNRIAILKYAVP 408 (794) T ss_pred EcceEEEee------------CC---eEEEEecCC--------ccccccccc--ccCCCCccEEEEecCCcceeeEEEee Confidence 999999976 22 699988522 233345542 256788877776655 556889999 Q ss_pred ecceeEEEecceEEEEEecccceeeecceeeeeeeeeeecCccceEEeCCeEEEEecCc----eEEec-cc-ccCccccc Q lcl|Aclame:pro 403 VGSAVMVVAANGIWMIQGGSDYGFTATNYLVTKISEHGCSSPNSVVVVDNSFMYWGDDG----IYHLT-RN-QYGDYVAN 476 (771) Q Consensus 403 ~~ssLlVft~nGVWal~G~S~~~fsAt~y~V~KISd~GcvspnSIV~id~aVvYwSDsG----I~~L~-~n-e~g~~ss~ 476 (771) +++.|++||..+-|.|.|+ + .++.++-.+.++|..+|.+-=.-+.+|++++|.+.+| +++.. .+ +..-..++ T Consensus 409 ~~~~L~i~T~~~q~~l~~~-~-~lTP~~~~~~~~s~~~~~~~~~Pv~vg~~v~f~~~~g~~~~~~r~~~~~~~~d~y~a~ 486 (794) T protein:vir:10 409 FSEELLIWSDEAQFVLTAS-G-TLTSRSVELNLTTQFDVQDRARPYGIGRNVYFASPRSSYTSIHRYYAVQDVSSVKNSE 486 (794) T ss_pred cCCcEEEEecCcEEEEeCC-C-cccceeEEEEEEEeecccCCCCceEeCCeEEEEecCCCeeEEEEEeeeccccCceehh Confidence 9999999999999999774 3 7999999999999999998777889999999999988 66643 33 34556677 Q ss_pred ccCchhhhhhhhhcChhHhccee--EEEEeeccEEEEEecccccccccccceeEE---ecccccceeeeecceeccceee Q lcl|Aclame:pro 477 NLTEKTIQKYYEKIPSDAILNAT--GFYDSYDKKVKWLYNTVLDGRTEPVTELVF---DLALGAFYPSKIGSLTAGRLPI 551 (771) Q Consensus 477 nLte~tIqt~~~sip~~~k~~~~--g~yD~~~~~v~wly~e~~d~~~~y~tElVf---~L~~~afY~~ki~s~~ags~~~ 551 (771) +||.. ++.|. +.... ..+-.-+..+.|.-. +.+..+.=+++. +..-.||.+|.+ .|...+ T Consensus 487 Dlt~~-~~hl~-------~~~v~~~~~~~~~~~~~~~~~~---~~~~l~~~~y~~~~~e~~v~aW~~~~~----~g~~~~ 551 (794) T protein:vir:10 487 DITSH-VPNYI-------PNGVFSICGSGTENFCSVLSHG---DPSKIFMYKFLYLNEELRQQSWSHWDF----GENVQV 551 (794) T ss_pred hHHHH-HHHhc-------CCceEEEEEeCCCCcEEEEEEc---CCCEEEEEEEeecCCceEEEeEEEEEc----CCcEEE Confidence 77655 32332 22222 122122334445432 222211100110 112359999976 333222 Q ss_pred eeeeeeeCCceeeecceEEeecccceeeccceeeeeeeeeeeeeeeeEEEEEEEcCCCceEEEeeecCCchh-hccccCC Q lcl|Aclame:pro 552 PVGSVKIPPYKLVETGEEVTVASEQVTATGELVTVKVSTRSPVIRETKYIIVEKLSSPMRISFGGYTDEEFV-DWKSVDG 630 (771) Q Consensus 552 ~i~s~~vp~y~~~~t~~~V~v~~~~vv~~~~~v~~~~~~~~~~~r~~~y~~~~~~g~~~~~sF~~~~~d~F~-Dw~~~~~ 630 (771) ++.. + ..+.--+-+.-. .++++.-+........+-+..|..--|-.......=.+|+.+..+ .....+. T Consensus 552 ~~~~---~----~~d~l~~iv~r~---~~~~~~r~~~~~~~~~~~~~~~~~~lD~~~~~~~~~~~~~~~~~~t~~~~~~~ 621 (794) T protein:vir:10 552 LACQ---S----ISSDMYVILRNE---FNTFLARISFTKNAIDLQGEPYRAFMDMKIRYTIPSGTYNDDTFTTSIHIPTI 621 (794) T ss_pred EEEE---e----cCCeEEEEEEeC---CCEEEEEEEEeecCCCCCCccceeeeecceEEEecCcccccccccceEEcccc Confidence 2211 0 001111101100 011111111111100000111111110000000000011111000 0000000 Q ss_pred cccchhHhhhhhccc----------------------cccceee---eecceE------EEEEeeecceeEecccceEEE Q lcl|Aclame:pro 631 IGVDAPAYLLTGYLA----------------------GGDYQRE---KFVPYI------TFHFKKTEDGFVEDAEGDWTP 679 (771) Q Consensus 631 ~gvd~~sy~~tgy~~----------------------~gd~~r~---K~~pyl------~~~~~~TEd~~t~d~~g~~~~ 679 (771) .|.++..=-...+.. .||.... .-.||. ..+++.. ++++.--. T Consensus 622 ~g~~~~eg~~v~~~adg~~~~~~~~~~~~~g~~~l~i~~~~~a~~v~vGl~y~s~~~~~~~~i~~~------~~~~~~~~ 695 (794) T protein:vir:10 622 YGANFGRGKITVLEPDGKITVFEQPTSGWQSDPWLRLSGNLEGREVFIGFNINFVYEFSKFLIKQT------TDDGSTST 695 (794) T ss_pred cCcccccccEEEEecCCceeeeeeeeeeeecceEEEecCCCCCceEEEeeeeeEEEEecceEEEcc------CCCcceee Confidence 122211000000000 0111100 001111 1111111 11111111 Q ss_pred c-CccceEEEEEEeeccCCC--------CCcccchheeeeeeehcccCCCCcCCCCcceeeeeccccceeeeEEEEEEEe Q lcl|Aclame:pro 680 T-NQSSCMVQSQWSWTNSPA--------SNKWGRTWQAYRFRRHFFPDNIDNQFDDGNSVVETKSRLRGSGKVLSLYITT 750 (771) Q Consensus 680 ~-n~SScl~~~~w~~s~~~~--------~~kw~~~~q~Yr~~r~~~p~~~~~~f~~~~~VV~TK~~~RG~G~~~~~~f~s 750 (771) . .-.-++-++.+++-+++. +..|.-+..=.|+.. +......-.-...++ +-.+||.++-.++.+++ T Consensus 696 ~~~gr~~l~r~~~~~~~tg~~~v~v~~~~~~~~~~~~~~~~~~---~~~~~g~~~~~tg~~--~vp~~g~~~~~~v~i~~ 770 (794) T protein:vir:10 696 EDIGRLQLRRAWVNYEDSGTFDIYVENQSSNWKYTMAGARLGS---NTLRAGRLNLGTGQY--RFPVVGNAKFNTVYILS 770 (794) T ss_pred eccccEEEEEEEEEeeccccEEEEEcCCccccceeeccceecc---ccccccccccccceE--EEEecccCceEEEEEEE Confidence 1 111234466666665542 222211111112221 221111111111222 45679999999999999 Q ss_pred cCCCceEEEeEEEEEEeecCC Q lcl|Aclame:pro 751 EPKKNLHIYGWSMLVDVNGTV 771 (771) Q Consensus 751 e~~KD~~llG~~~~~~~~g~~ 771 (771) +.--.|+||+.+.+.+.+=.= T Consensus 771 d~P~P~tvlsi~~eg~y~~r~ 791 (794) T protein:vir:10 771 DETTPLNIIGCGWEGNYLRRS 791 (794) T ss_pred CCCCceEEEEEEEEEEEeccc Confidence 999999999988777665433 No 16 >protein:vir:6326 Length: 826 # NCBI annotation: tail tubular protein B # Family: family:all:825 # MgeID: mge:132 # MgeName: phiKMV # Cross-refs: genbank:acc:NP_877473;genbank:gi:33300845;uniprot:Q7Y2D1;genbank:GeneID:1482615 Probab=99.61 E-value=3.4e-13 Score=88.93 Aligned_cols=689 Identities=15% Similarity=0.129 Sum_probs=287.0 Q ss_pred CchhhhhhhhccccceeeeccchhcCCCCccccceeeeeccccchhhhhcceeecCCceeecceeeccCceeeeeechhh Q lcl|Aclame:pro 1 MAKTTNAAEFNTFVGGLITEASPLTFPQNASIDEVNFILNRDGSRNRRNGMDFENGATKVVCNTLVPADGTIAVTSHNWE 80 (771) Q Consensus 1 Ma~~~~~~e~ntFv~GliTEan~Lt~P~nas~De~N~~L~k~G~r~RR~Gl~~E~s~~~~l~~~~~~s~~~~~vt~~~W~ 80 (771) ||+-. -.+..|.+|+=--.-++-|| +.-.+-+||+...-|--+||-|+.+.... ..+++..+.. =|. T Consensus 1 M~~i~--~s~~n~~~GvSqq~d~~r~~-~q~~~~~N~~~~~~~G~~rRpg~~~v~~~--------~~~~~~~~~~--~~~ 67 (826) T protein:vir:63 1 MSYKQ--SAYPNLLMGVSQQVPFERLP-GQLSEQINMVSDPVSGLRRRSGIELMAHL--------LHTDQPWPRP--FLY 67 (826) T ss_pred Cceee--eecchhhcceeccCchHhhh-hhhhhhhcceeeccCCcccCchhHhhhhh--------ccCCcccccc--EEE Confidence 99655 45778999954444555565 44567899999988888999998776521 1122111111 011 Q ss_pred --hccCccceeEEEEEEcc-EEEEEecCCcee--eheeeEeeecceeCCCcceeeEEeeEEEEEEcCCcceEE-----Ee Q lcl|Aclame:pro 81 --NAGGEVGRWISLVQVGT-ELKFFQTTGETL--SEGNFYNYQFVNMSPSHKLSYAVVDGLLVVANGSRDIYV-----FE 150 (771) Q Consensus 81 --~~~g~v~~~~l~~q~g~-~l~~~d~t~~~l--Sn~~l~~~~fv~~sP~~~is~~~v~G~lVva~~~~~~~i-----~~ 150 (771) +..+.+- -+++..|+ -+++|++.+..+ .++....|. ...|...|+++.+.....|+++.-++.. .. T Consensus 68 ~~~r~~~~~--~~~~~~~~g~irv~~~~~g~~~~~~~~~~~y~--~~~~~~~l~~~t~aD~~fi~n~~~~p~~~~~~~~~ 143 (826) T protein:vir:63 68 HTNLGGRSI--AMLVAQHRGELYLFDERDGRLLMGQPLVHDYL--KANDYRQLRAATVADDLFIANLSVKPEADRTDIKG 143 (826) T ss_pred EEecCCCce--EEEEEecCCcEEEEEcCCCeEEEcCCCCCcee--eecCccceEEEEeCCEEEEEeCCeeeeeccccccc Confidence 0112211 12233344 388887655433 222223333 3456656999999999999999886642 11 Q ss_pred ccCCceee---------EEEEEEEEEeeeecc--------ccccCcceeccccccCCCccCchh-heeeeec-----ccc Q lcl|Aclame:pro 151 YDSGSVSV---------TTKRLLVRDLFGVQD--------IVNGVDLRQGNDIATRPTVQTNAH-IYNLRNQ-----TFG 207 (771) Q Consensus 151 ~~~~s~~~---------~t~~l~iRd~~~l~d--------~~~g~~~~~~~~~~~rpttlS~eh-~YnL~Nq-----gW~ 207 (771) .+.++.++ ++..|.|........ +++.........+.+-....+.+. .++|+-+ .|- T Consensus 144 ~~~~~~~~~~v~~g~Y~~~y~vti~~~~~~~gt~~s~t~t~~t~~~~~a~~~~~~~~~~~s~~yia~~l~~~~~a~~~~~ 223 (826) T protein:vir:63 144 VDPNKAGWLYIKAGQYSKAFSMTIKVKDNATGTTYSHTATYVTPDNASTNPNLAEAPFQTSVGYIAWQLYGKFFGAPEYT 223 (826) T ss_pred cCCCCcEEEEeeccccCceEEEEEEeccccCCccccceEEEEeccCCcccccccccceeeeeeeeeeeceeeeeeccccc Confidence 22222222 112233321111110 000000000000000000001110 1111111 111 Q ss_pred ceeeee------------------ccCCCCcceEEEcccc---------cc---CCcCcchheeeccccccCCCcc-c-- Q lcl|Aclame:pro 208 VPRVTW------------------HSNEPSDPIVTFRSAA---------SG---KFPSNSDSVNLALSKRADVEPS-T-- 254 (771) Q Consensus 208 ~~~~~~------------------~s~s~~~~vv~~~~~~---------~G---~yPSnaD~~n~~~~~~s~~e~~-~-- 254 (771) .+..+. .+-...+..+++.... .| ..-+++..++..- +.....+. . T Consensus 224 ~~~~t~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~l~~~~p~~~~~ 302 (826) T protein:vir:63 224 LPNSTKKYPKVDPDANAATIAGYLNQRGVQDGYIAFRGDADIHVEVSTDMGNNYGIASGGMSLNATA-DLPALLPGVGAP 302 (826) T ss_pred cCCCccccceecCCcccceeecceeEecccccEEEEeeCCcccEEEccCCCCcceEEEEEeecccee-eccccCCCcccc Confidence 100000 0000000111111100 00 0000000000000 00000000 0 Q ss_pred ccccchhhhhcccccccc--------CCCcceEEEeeecCcccceeee-ec-----ccc--cccccc--eee----ecch Q lcl|Aclame:pro 255 TDRFRAEDIVLNPIGTYE--------TARGFFIIDAMARGKSRLEEIV-KL-----KQR--YPSLSF--GVS----SLPQ 312 (771) Q Consensus 255 ~~~F~~~~~~~n~~Gs~~--------aarG~yI~d~~~~~~s~~~~~~-~~-----~~~--~p~~~~--~t~----~~p~ 312 (771) ...+...+-...+.|... .+.|.+...+-.-.-....+|. .+ ... +++.+. ... .-|. T Consensus 303 ~~~~~~~~~~~~~~g~~~d~~y~~~~~~~~~w~e~~~~~~~~~~~tmp~~l~~~~~~~~f~~~~~~w~~r~~Gd~~tnp~ 382 (826) T protein:vir:63 303 GVGVQFMDGAVMATGSTKAPVYFEWDSANRRWAERAAYGTDWVLKKMPLALRWDEATDTYSLNELEYDRRGSGDEDTNPT 382 (826) T ss_pred eEEEeeEEeEEecCCCcccceEEEEEcCCceEEEEeecCcccccccceEEEEEeccCCeEEEeccccccccccccccCCC Confidence 000000000011122111 1111111111111000011110 00 000 011100 000 1121 Q ss_pred hhc-cCCceeeeeecceeEEeeecceeecccccCCcccceeEEEeeecchhhccccccCCCCcCchhhhhhhcCCCEEee Q lcl|Aclame:pro 313 DET-PGGASVVCEYAGRVWYAGFSGQIIDGDDQSPRLVSYILFSQLVDSPADIVNCYQDGDPTSTEEPELVDTDGGFIRI 391 (771) Q Consensus 313 d~~-~g~~t~v~~~aGRv~y~g~~~~~~~~~~~~p~~~~yv~fSqli~s~~~lg~CyQ~~DPts~~~~dl~dtDGG~I~I 391 (771) .-. -.+|++|+=|-+|+++++ |. +|++||.=| |.+=.|.+. ..+.|+|--.+.+ T Consensus 383 psf~g~~~~~v~f~q~RL~f~~------------~~---~v~~Srtgd--------~~nF~~~s~--~~~~DdD~I~~~~ 437 (826) T protein:vir:63 383 FNFVTRGITGMTTFQGRLVLLS------------QE---YVCMSASNN--------PHRWFKKSA--AALNDDDPIEIAA 437 (826) T ss_pred ccccCCCceEEEEEeceEEEee------------CC---eEEEEccCC--------ccccccccc--cCCCCCccEEEEE Confidence 111 245899999999999875 22 588887522 223334442 2566788777766 Q ss_pred cCC--CceeEEEeecceeEEEecceEEEEEecccceeeecceeeeeeeeeeecCccceEEeCCeEEEEecCc-----eEE Q lcl|Aclame:pro 392 EGA--HDIINLVNVGSAVMVVAANGIWMIQGGSDYGFTATNYLVTKISEHGCSSPNSVVVVDNSFMYWGDDG-----IYH 464 (771) Q Consensus 392 ~ga--~~Iv~mv~~~ssLlVft~nGVWal~G~S~~~fsAt~y~V~KISd~GcvspnSIV~id~aVvYwSDsG-----I~~ 464 (771) -+. ..|.+|+++++.|++||..+-|.|.|+ ..++.++-.+.++|..+|.+-=.=+.+|++++|.+++| |+. T Consensus 438 ss~~~~~i~~~v~~~~~L~l~T~~~q~~ls~~--~~lTP~~~~i~~~s~~~~~~~~~Pv~vG~~v~Fv~~~g~~~s~v~e 515 (826) T protein:vir:63 438 QGSLTEPYEHAVTFNKDLIVFAKKYQAVVPGG--GIVTPRTAVISITTQYDLDTRAAPAVTGRSVYFAAERALGFMGLHE 515 (826) T ss_pred cCCcceeeEEEeecCCcEEEEecCcEEEEeCC--CcccceeEEEEEEEeecccCCCCceEeCCeEEEEecCCCceeEEEE Confidence 544 467789999999999999999999773 38999999999999999998777789999999999876 999 Q ss_pred ecccc--cCcccccccCchhhhhhhhhcChhHhcceeEEEEeeccEEEEEecccccccccccceeEE---ecccccceee Q lcl|Aclame:pro 465 LTRNQ--YGDYVANNLTEKTIQKYYEKIPSDAILNATGFYDSYDKKVKWLYNTVLDGRTEPVTELVF---DLALGAFYPS 539 (771) Q Consensus 465 L~~ne--~g~~ss~nLte~tIqt~~~sip~~~k~~~~g~yD~~~~~v~wly~e~~d~~~~y~tElVf---~L~~~afY~~ 539 (771) +..+. .+...+++||.. ++.|..+ + .... -|=.-.+.+.|.-.+ -+..+.=+++. +.+-.||.+| T Consensus 516 ~~~~~d~~~~y~~~dlt~~-~~~l~~~-~-v~~~----a~s~~~~~v~~~~~~---dg~l~~~~y~~~~~e~~v~aW~~~ 585 (826) T protein:vir:63 516 MAPSPSTDSHYVAEDVTSH-IPSYMPG-P-AEYI----QAAASSGYLVFGTST---ADEMICHQYLWQGNEKVQNAFHRW 585 (826) T ss_pred EEeeeccccceehhHHHHH-HHHhcCC-C-eEEE----EEcCCCCEEEEEEcC---CCEEEEEEEeeCCCcEEEEeEEEE Confidence 99985 355778888876 5555443 1 1111 222344556676532 11111101111 1224699999 Q ss_pred eecceeccceeeeeeeeeeCCceeeecceEEeecccceeeccceeeeeeee----eeeeeeeeEEEEEEEcCCCceEEEe Q lcl|Aclame:pro 540 KIGSLTAGRLPIPVGSVKIPPYKLVETGEEVTVASEQVTATGELVTVKVST----RSPVIRETKYIIVEKLSSPMRISFG 615 (771) Q Consensus 540 ki~s~~ags~~~~i~s~~vp~y~~~~t~~~V~v~~~~vv~~~~~v~~~~~~----~~~~~r~~~y~~~~~~g~~~~~sF~ 615 (771) .+. |... .+..+.==.|-++... .++++.-+-... ....+....+-...+.+...... T Consensus 586 ~~~----g~v~-~~~~i~d~l~~iv~r~-----------~~~~~~r~~~e~~~~~~~~~~~~~d~~~~~d~~~~~~~~-- 647 (826) T protein:vir:63 586 TLR----HQII-GAYFTGDNLMVLIQKG-----------QEIALGRMHLNSLPAREGLQYPKYDYWRRIEATVAGELE-- 647 (826) T ss_pred ecC----CcEE-EEEEECCeEEEEEEeC-----------CCEEEEEEEEEecCCccccccCCccceEEEEEeeeeeec-- Confidence 663 3322 1111100001111100 000000000000 00000000011111111111100 Q ss_pred eecCCc---hhhccccCCcccchhHhhhhhcc-------------cccccee---eeecceEEEEEeeecceeEecccce Q lcl|Aclame:pro 616 GYTDEE---FVDWKSVDGIGVDAPAYLLTGYL-------------AGGDYQR---EKFVPYITFHFKKTEDGFVEDAEGD 676 (771) Q Consensus 616 ~~~~d~---F~Dw~~~~~~gvd~~sy~~tgy~-------------~~gd~~r---~K~~pyl~~~~~~TEd~~t~d~~g~ 676 (771) ..... ..|+....+-.+.+..++.-++. .+|+... ..-.||.+.+ ++..=..++.+|+ T Consensus 648 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~l~~~~~~~~~~v~VGl~y~s~~--~~~~~~~~~~~g~ 724 (826) T protein:vir:63 648 -LTKQHWDLIKDASAVYQLQPVAGAYMERTHLGVKRETNTKVFLDVPEAVVGAVYVVGCEFWSKV--EFTPPVLRDHNGL 724 (826) T ss_pred -cCcceeecccCcccccEEEEeeCccccCCccceEEecCCEEEEecCCCccccEEEEeeeeeEEE--EecceEEEccCCC Confidence 00111 11222211111222332222111 0111110 0112222111 1111111222221 Q ss_pred EEEcCccceEEEEEEeeccCCCC-Ccccchhe----eeeee--ehcccCCCCcCCCCcceeeee---ccccceeeeEEEE Q lcl|Aclame:pro 677 WTPTNQSSCMVQSQWSWTNSPAS-NKWGRTWQ----AYRFR--RHFFPDNIDNQFDDGNSVVET---KSRLRGSGKVLSL 746 (771) Q Consensus 677 ~~~~n~SScl~~~~w~~s~~~~~-~kw~~~~q----~Yr~~--r~~~p~~~~~~f~~~~~VV~T---K~~~RG~G~~~~~ 746 (771) - ..+-.-.+-++.+++.+++.- -+..++.. .|++. |..-|+.. -+...+.| +..+||.....+| T Consensus 725 ~-~~~gr~~l~r~~~~~~~tg~~~v~v~~~~~~~~~~~~~~~~~~~~~~~~-----~g~p~~~t~~~~vP~~~~~~~~~i 798 (826) T protein:vir:63 725 P-MTSTRAVLHRYNVNFGWTGEFLWRISDTARPNQPWYDTTPLRLFSRQLN-----AGEPLVDSAVVPLPARVDMATSKF 798 (826) T ss_pred c-ceeccEEEEEEEEEeeccccEEEEecCccccceeEeecCCceecccccc-----cccccccceEEEEEEeeccceEEE Confidence 0 111123455667777665431 01111111 12321 11111111 11111212 3457899999999 Q ss_pred EEEecCCCceEEEeEEEEEEeecCC Q lcl|Aclame:pro 747 YITTEPKKNLHIYGWSMLVDVNGTV 771 (771) Q Consensus 747 ~f~se~~KD~~llG~~~~~~~~g~~ 771 (771) ++++...-+|+||+|+.....|=.= T Consensus 799 ~i~~d~P~p~~il~i~~~~~yn~r~ 823 (826) T protein:vir:63 799 ELSCHSPYDMNVRAVEYNFKSNQTY 823 (826) T ss_pred EEEeCCCCcEEEEEEEEEEEEecee Confidence 9999999999999999887544332 No 17 >protein:vir:105647 Length: 800 # NCBI annotation: putative tail tubular B protein # Family: family:all:825 # MgeID: mge:1674 # MgeName: K1E # Cross-refs: genbank:acc:YP_425011;genbank:gi:83571759;uniprot:Q2WC41;genbank:GeneID:3837288 Probab=99.58 E-value=7.6e-13 Score=87.01 Aligned_cols=670 Identities=13% Similarity=0.112 Sum_probs=280.1 Q ss_pred CchhhhhhhhccccceeeeccchhcCCCCccccceeeeeccccchhhhhcceeecCCceeecceeeccCceeeeeechhh Q lcl|Aclame:pro 1 MAKTTNAAEFNTFVGGLITEASPLTFPQNASIDEVNFILNRDGSRNRRNGMDFENGATKVVCNTLVPADGTIAVTSHNWE 80 (771) Q Consensus 1 Ma~~~~~~e~ntFv~GliTEan~Lt~P~nas~De~N~~L~k~G~r~RR~Gl~~E~s~~~~l~~~~~~s~~~~~vt~~~W~ 80 (771) |-.++. +-.|.+| |-.--++.==++.-.+-+||+...-|--+||-|+.+.. . |.....+......+- . T Consensus 1 ~~v~~s---~~nl~~G-vSqQ~d~~R~~~q~~~~~N~~~~~~gGl~rRpGt~fva--~--l~~~~~~~~~~~~~~----~ 68 (800) T protein:vir:10 1 MEVQGS---LGRQIQG-ISQQPPAVRLDGQCTTMVNMVPDVVNGTQSRMGTTHIA--K--LLDEGTDNMATHHYR----R 68 (800) T ss_pred CeEEee---cchhccc-ccccchhHhhhhhhhhhhcceeeeccCcccCCcceEEE--e--ecCCCCCccEEEEEe----c Confidence 766553 4456677 33333333334555678999999888888999986653 1 111111110000000 1 Q ss_pred hccCccceeEEEEEEccEEEEEecCCceeeheeeE---eeecceeCCCcceeeEEeeEEEEEEcCCcceEEEeccCCcee Q lcl|Aclame:pro 81 NAGGEVGRWISLVQVGTELKFFQTTGETLSEGNFY---NYQFVNMSPSHKLSYAVVDGLLVVANGSRDIYVFEYDSGSVS 157 (771) Q Consensus 81 ~~~g~v~~~~l~~q~g~~l~~~d~t~~~lSn~~l~---~~~fv~~sP~~~is~~~v~G~lVva~~~~~~~i~~~~~~s~~ 157 (771) +..++. -+++...|..++||+..+.-+....-. .+-...-.|.+.|+++.+...+.|+++.-++....-...+.. T Consensus 69 ~~~~~~--~~~~~~~g~~~rv~~~~G~~~~v~~~~~~~~~~~~~~~~~~~l~~~tvaD~tfi~n~~~~~~~~~~~~~~~~ 146 (800) T protein:vir:10 69 GEGDEE--YFFTLKKGQVPEIFDKHGRKCNVISQDAPMTYLSEVVNPREDVQFMTIADVTFMLNRRKVVKVSNRKSPKVG 146 (800) T ss_pred CCccce--EEEEEEcCCeEEEEecCCcEEEeecCCcceeeeeccCCchhhEEEEEEcCEEEEecCcccccccccCCCCCC Confidence 122111 244556777889999876655432111 111111223345999999999999999987654222111111 Q ss_pred eEEEEEEEEEe-eeec--cccccCccee----ccccccCCCccCchhh-eeeeeccccceeee-eccCCCCcceEEEc-- Q lcl|Aclame:pro 158 VTTKRLLVRDL-FGVQ--DIVNGVDLRQ----GNDIATRPTVQTNAHI-YNLRNQTFGVPRVT-WHSNEPSDPIVTFR-- 226 (771) Q Consensus 158 ~~t~~l~iRd~-~~l~--d~~~g~~~~~----~~~~~~rpttlS~eh~-YnL~NqgW~~~~~~-~~s~s~~~~vv~~~-- 226 (771) -. -.+.+|-- ++.+ -.++|+..-. ....++.+...+.|.+ .+|+.+-++..... +.-...+..+..++ T Consensus 147 ~~-~~~~vr~g~y~~~y~i~i~g~~~~~~~t~~~~~~~~~~~~s~~~i~~~L~~~l~~~~~~~~~t~~~~g~~i~i~~~~ 225 (800) T protein:vir:10 147 DK-AIVFCAYGQYGTSYSIIINGTTAASFKTPDGGSAEHVEQIRTERITSELYSKLQQWSGVNDYEIQRDGTSIFIERRD 225 (800) T ss_pred ce-EEEEEeccccccceeEEeccceEEEEEecCCCcccccccccHHHHHHHHHhhhhhcCcccceEEEEcCcEEEEEEec Confidence 00 12333322 1100 0011221100 0001122222222211 12222221110000 00000111111000 Q ss_pred -----------------------cccccCCcCcchheeecc----ccccCCCcccccccchhhhhccccccc--cCCCcc Q lcl|Aclame:pro 227 -----------------------SAASGKFPSNSDSVNLAL----SKRADVEPSTTDRFRAEDIVLNPIGTY--ETARGF 277 (771) Q Consensus 227 -----------------------~~~~G~yPSnaD~~n~~~----~~~s~~e~~~~~~F~~~~~~~n~~Gs~--~aarG~ 277 (771) -...+.-|+.+- +.+. +..+..++.-.-+|++.. +..|.. .++.|. T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Lp~~~~--~g~~~~i~~~~~~~~~~y~~~~~~~~---~~~~~w~e~~~~~~ 300 (800) T protein:vir:10 226 GKSFTVTTTDGAKGKDLVAIKNKVSSTDLLPSRAP--AGYKVQVWPTGSKPESRYWLQAEPKE---GNLVSWKETIAADV 300 (800) T ss_pred CCceEEEEeecCCcceEEEEEeeccceeeccccCC--CCceEEEEcCCCCCCceeEEEEEecc---ccceEEEeecccCc Confidence 111111222110 0000 011111111111222111 111110 000111 Q ss_pred eE----------E--EeeecCcccceeeeec---------ccccccccceeeecchhhccCCceeeeeecceeEEeeecc Q lcl|Aclame:pro 278 FI----------I--DAMARGKSRLEEIVKL---------KQRYPSLSFGVSSLPQDETPGGASVVCEYAGRVWYAGFSG 336 (771) Q Consensus 278 yI----------~--d~~~~~~s~~~~~~~~---------~~~~p~~~~~t~~~p~d~~~g~~t~v~~~aGRv~y~g~~~ 336 (771) ++ + .....+ +..-++... ...-|-+++ .| ...++.|+||+=|-+|++++| T Consensus 301 ~~~~~~~tmp~~lv~~~~~~~-~~~~~~~~~~w~~r~~gd~~tnp~psf--~~---~~~~~~i~~v~f~q~RL~f~~--- 371 (800) T protein:vir:10 301 LLGFDKGTMPYIIERTGIIDG-IAQFKIRQGDWEDRKVGDDLTNPMPSF--ID---EEVPQTIGGMFMVQNRLCFTA--- 371 (800) T ss_pred eeeeecccccEEEEEeeeeec-ceeEEEEeccccccccCCCCCCCCchh--cC---CCCCCCceeEEEEeeeEEEee--- Confidence 00 0 000000 000000000 000111111 11 123356999999999999876 Q ss_pred eeecccccCCcccceeEEEeeecchhhccccccCCCCcCchhhhhhhcCCCEEeecCC--CceeEEEeecceeEEEecce Q lcl|Aclame:pro 337 QIIDGDDQSPRLVSYILFSQLVDSPADIVNCYQDGDPTSTEEPELVDTDGGFIRIEGA--HDIINLVNVGSAVMVVAANG 414 (771) Q Consensus 337 ~~~~~~~~~p~~~~yv~fSqli~s~~~lg~CyQ~~DPts~~~~dl~dtDGG~I~I~ga--~~Iv~mv~~~ssLlVft~nG 414 (771) |. +|++||.=| |.+=.|.+.. .+.|+|--.+.+-+. ..|.+|+++++.|++||..+ T Consensus 372 ---------~~---~v~~Srtgd--------~~nF~~~t~~--~~~DdD~I~~~~ss~~~~~i~~~v~~~~~L~l~T~g~ 429 (800) T protein:vir:10 372 ---------GE---AVIASRTSY--------FFDFFRYTVI--SALATDPFDIFSDASEVYQLKHAVTLDGATVLFSDKS 429 (800) T ss_pred ---------CC---eEEEEccCC--------cccccccccc--CCCCCccEEEEEcCCcceeeeeEeecCCcEEEEecCc Confidence 22 688888522 2233344322 467888777777665 67888999999999999999 Q ss_pred EEEEEecccceeeecceeeeeeeeeeecCccceEEeCCeEEEEecCc----eEEecccc-cCcccccccCchhhhhhhhh Q lcl|Aclame:pro 415 IWMIQGGSDYGFTATNYLVTKISEHGCSSPNSVVVVDNSFMYWGDDG----IYHLTRNQ-YGDYVANNLTEKTIQKYYEK 489 (771) Q Consensus 415 VWal~G~S~~~fsAt~y~V~KISd~GcvspnSIV~id~aVvYwSDsG----I~~L~~ne-~g~~ss~nLte~tIqt~~~s 489 (771) -|.|.|+ ..++.++-.+.++|..+|.+-=.=+.+|++++|.+.+| |+.+..+. ..-..+++||.. ++.|..+ T Consensus 430 q~~l~g~--~~lTP~~~~i~~~s~~~~~~~~~Pv~vG~~v~Fv~~~g~~s~vre~~~~~~~d~~~a~DlT~~-~~hl~~~ 506 (800) T protein:vir:10 430 QFILPGD--KPLEKSNALLKPVTTFEVNNKVKPVVTGESVMFATNDGSYSGVREFYTDSYSDTKKAQAITSH-VNKLIEG 506 (800) T ss_pred EEEEeCC--CcccceeEEEEEEEeeeccCCCCceEeCCeEEEecCCCCeeEEEEEeeeecccceehhhHHhH-HHHhcCC Confidence 9999884 37999999999999999998888899999999999986 88888874 344667777766 4444432 Q ss_pred cChhHhccee-EEEEeeccEEEEEecccccccccccceeEE-----ecccccceeeeecc-eeccceeeeeeeeeeCCce Q lcl|Aclame:pro 490 IPSDAILNAT-GFYDSYDKKVKWLYNTVLDGRTEPVTELVF-----DLALGAFYPSKIGS-LTAGRLPIPVGSVKIPPYK 562 (771) Q Consensus 490 ip~~~k~~~~-g~yD~~~~~v~wly~e~~d~~~~y~tElVf-----~L~~~afY~~ki~s-~~ags~~~~i~s~~vp~y~ 562 (771) ... .-+=.....+.|+.- .+.+.-+. +-| +..-+||.+|.+.. ....... .++.- .|- T Consensus 507 -------~v~~~~~~~~~~~~v~~~~--~~~~~l~~--~~yl~~~~e~~~~aW~~w~~~~~~~~~~~~-~~~d~---l~~ 571 (800) T protein:vir:10 507 -------NITNMAASTNVNRLLVTTD--KYRNIIYC--YDWLWQGTDRVQSAWHVWEWPMGTKVRGMF-YSGEL---LYL 571 (800) T ss_pred -------ceEEEEEeCCCCeEEEEEE--cCCCeEEE--EEEeecCCceEEEEEEEEEcCCCcEEEEEE-EeCCe---EEE Confidence 111 111012333333321 12221110 011 12335788876532 1111100 11110 011 Q ss_pred eeecc-----eEEe--------------ec------ccceeeccceeeeeeeeeee--------------eeeeeEEEEE Q lcl|Aclame:pro 563 LVETG-----EEVT--------------VA------SEQVTATGELVTVKVSTRSP--------------VIRETKYIIV 603 (771) Q Consensus 563 ~~~t~-----~~V~--------------v~------~~~vv~~~~~v~~~~~~~~~--------------~~r~~~y~~~ 603 (771) ++.-. +++. ++ .....++...++...+.... .....+.... T Consensus 572 iv~r~~~~~ier~~~~~~~~~~~~~~~~lD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~~~ 651 (800) T protein:vir:10 572 LLERGDGVYLEKMDMGDALTYGLNDRIRMDRQAELIFKHFKAEDEWISEPLPWTPTNPELLDCILIEGWDSYIGGSFLFK 651 (800) T ss_pred EEECCCcEEEEEEecccCccccccceeeeecceeecccccccCcceEEEeccccccCCcceEEeeeccceeecCceeEEE Confidence 11110 1110 00 00001111111110000000 0000111111 Q ss_pred EEcCCCceEEEeeecCCchhhccccCCcccchhHhhhhhccccccceeeeecceEEEEEeeecceeEecccceEEEcCcc Q lcl|Aclame:pro 604 EKLSSPMRISFGGYTDEEFVDWKSVDGIGVDAPAYLLTGYLAGGDYQREKFVPYITFHFKKTEDGFVEDAEGDWTPTNQS 683 (771) Q Consensus 604 ~~~g~~~~~sF~~~~~d~F~Dw~~~~~~gvd~~sy~~tgy~~~gd~~r~K~~pyl~~~~~~TEd~~t~d~~g~~~~~n~S 683 (771) .++ ..+.+....--.++ +|.. + -+.-|+.+.-.+.- +..++ |.++|-+.. .| . T Consensus 652 ~~~-~~g~~~~~~~~~~g--~~~~--------~-~v~VGl~Y~s~~~~------~~~~i-~~~~g~~~~-~~------r- 704 (800) T protein:vir:10 652 YKP-SDNTLSTTFDMHDD--NHVK--------A-KVIVGQIYPQEFEP------TPVVI-RDRQDRVSY-ID------V- 704 (800) T ss_pred EEe-cCCceEeeeeecCC--Cccc--------c-eEEEeeeeeEEEee------cceEE-EcCCCcccc-cC------C- Confidence 111 11111100000000 1211 1 12233333222211 11222 222332111 01 0 Q ss_pred ceEEEEEEeeccCCCCCcc-----cc-hheeeeee--ehcccCCCCcC--CCCcceeeeeccccceeeeEEEEEEEecCC Q lcl|Aclame:pro 684 SCMVQSQWSWTNSPASNKW-----GR-TWQAYRFR--RHFFPDNIDNQ--FDDGNSVVETKSRLRGSGKVLSLYITTEPK 753 (771) Q Consensus 684 Scl~~~~w~~s~~~~~~kw-----~~-~~q~Yr~~--r~~~p~~~~~~--f~~~~~VV~TK~~~RG~G~~~~~~f~se~~ 753 (771) .=+-++.+++.+++. -++ .+ ....|... +.-.|++.... ...| ++ +-.++|.++-.+++++++.- T Consensus 705 ~~i~r~~~~~~~sg~-~~~~v~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~tg--~~--~vp~~g~~~~~~v~i~~d~P 779 (800) T protein:vir:10 705 PVVGLVHLNLDMYPD-FSVEVKNVKSGKVRRVLASNRIGGALNNTVGYVEPREG--VF--RFPLRAKSTDAVYRIIVESP 779 (800) T ss_pred eEEEEEEEEeecCce-EEEEeccCcccceeEEccCCeeccccccccCcccccCc--eE--EEEEeccCceeEEEEEECCC Confidence 013344444544431 000 00 01112111 11123322111 1122 22 23578999999999999999 Q ss_pred CceEEEeEEEEEEeecCC Q lcl|Aclame:pro 754 KNLHIYGWSMLVDVNGTV 771 (771) Q Consensus 754 KD~~llG~~~~~~~~g~~ 771 (771) -.|+||+.+.+.+.+=+= T Consensus 780 ~P~tvlai~~eg~y~~r~ 797 (800) T protein:vir:10 780 HTFQLRDIEWEGSYNPTK 797 (800) T ss_pred CcEEEEEEEEEEEeeccc Confidence 999999988777665443 No 18 >protein:vir:80253 Length: 777 # NCBI annotation: putative tail tubular protein B # Family: family:all:825 # MgeID: mge:1879 # MgeName: LKA1 # Cross-refs: genbank:acc:YP_001522886;genbank:gi:158345179;genbank:GeneID:5687516 Probab=99.57 E-value=9.9e-13 Score=86.39 Aligned_cols=671 Identities=12% Similarity=0.051 Sum_probs=276.6 Q ss_pred CchhhhhhhhccccceeeeccchhcCCCCccccceeeeeccccchhhhhcceeecCCceeecceeeccCceeeeeechhh Q lcl|Aclame:pro 1 MAKTTNAAEFNTFVGGLITEASPLTFPQNASIDEVNFILNRDGSRNRRNGMDFENGATKVVCNTLVPADGTIAVTSHNWE 80 (771) Q Consensus 1 Ma~~~~~~e~ntFv~GliTEan~Lt~P~nas~De~N~~L~k~G~r~RR~Gl~~E~s~~~~l~~~~~~s~~~~~vt~~~W~ 80 (771) ||+.. --++.|..|+=--.-.+-|| +.-..-+||+...-|--+||-|+.+..... +...+.. ++ -+. . T Consensus 1 M~~i~--~~~~nf~~GvS~q~D~~ry~-~q~~~~~N~~~~~~gG~~rRpGt~fv~~l~----~~~~~~~---~~-~~~-~ 68 (777) T protein:vir:80 1 MSYFA--GSYRQLLFGVSQQTAKDRLE-GQVESQLNMQSDLVTGPRRRSPVHLIADAM----AATDANR---LA-YSL-A 68 (777) T ss_pred Cceee--eecchhhcccccCCchHHhh-hHHhhhhcceeeeccCceeCcchHhhhhhc----CCCcccc---ee-EEE-E Confidence 99755 56788999944334444444 555678999999888889999987653110 0111110 00 000 0 Q ss_pred hccCccceeEEEEEEcc-EEEEEecCCceeeheeeEeeecceeCCCcceeeEEeeEEEEEEcCCcceEEEeccCCc--ee Q lcl|Aclame:pro 81 NAGGEVGRWISLVQVGT-ELKFFQTTGETLSEGNFYNYQFVNMSPSHKLSYAVVDGLLVVANGSRDIYVFEYDSGS--VS 157 (771) Q Consensus 81 ~~~g~v~~~~l~~q~g~-~l~~~d~t~~~lSn~~l~~~~fv~~sP~~~is~~~v~G~lVva~~~~~~~i~~~~~~s--~~ 157 (771) +..+.+ .-++.-.|+ -+++|+..+-.+-...-+.|. .-.|-..|+++.+...+.|+++.-++.-+.-...+ .. T Consensus 69 ~~~~~e--~~~~l~~g~g~irv~~~~~g~~~~~~~~~Yl--~a~~~~~l~~~q~aD~~fi~n~~~~p~~~~~~~~~~~~~ 144 (777) T protein:vir:80 69 TFSGRE--VLLLVDTLDGTLTILDDATGEVLFTGTNSYL--TAGTGRSIRFAALDDSVFVANTEVIPQTQLWSGASAYPD 144 (777) T ss_pred ecCCCe--eEEEEEecCCeEEEEECCCCeEEEecCCCce--eeccccceeEEEEcCEEEEEeCCccceeeecccCCCccC Confidence 111111 123333455 588887754433222122232 33344459999999999999999876432211111 00 Q ss_pred eEE-EEEEEEE------e-eeeccccccCcce-----ecccc--ccCCCccCchhheeeeec--------cccce----- Q lcl|Aclame:pro 158 VTT-KRLLVRD------L-FGVQDIVNGVDLR-----QGNDI--ATRPTVQTNAHIYNLRNQ--------TFGVP----- 209 (771) Q Consensus 158 ~~t-~~l~iRd------~-~~l~d~~~g~~~~-----~~~~~--~~rpttlS~eh~YnL~Nq--------gW~~~----- 209 (771) ... --+.+|- . .-+++...+...- ++... ...+..++ ++.+..+. +|..- T Consensus 145 ~~~~~~~~v~~~~~g~~y~i~i~~~~~~~~~t~~~~t~~~~~~~~~~~~ia~--~L~~~~~~~~~~~s~~~~~~~~~g~~ 222 (777) T protein:vir:80 145 PTRAGYLYVVAGAFSKQYRLSITNQVTGVTTSVDVTTSATEASQATGEYVIT--QLRTAAEADATIGTAAGFAYYQDGAY 222 (777) T ss_pred cccceEEEeeccCCCceeeEeecCCcCceeEEEecCCcccccccccchhhhh--hhhhhhccccceeecCceEEEeCCcE Confidence 000 0111221 0 1111111110000 00000 00000000 01111100 11000 Q ss_pred -----------eeeeccCCCCcceEEEccccccCCcCcchh-eeeccccccCCCcccccccchhhhh------cc-cccc Q lcl|Aclame:pro 210 -----------RVTWHSNEPSDPIVTFRSAASGKFPSNSDS-VNLALSKRADVEPSTTDRFRAEDIV------LN-PIGT 270 (771) Q Consensus 210 -----------~~~~~s~s~~~~vv~~~~~~~G~yPSnaD~-~n~~~~~~s~~e~~~~~~F~~~~~~------~n-~~Gs 270 (771) .....++....++. .+.......|++..- .+......+..++-.+-+|....-. .+ ..|. T Consensus 223 ~~i~~~~~~~~t~~~g~~~~~~~~~-~~v~~~~~lp~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~w~e~~~~~~~~~~ 301 (777) T protein:vir:80 223 LYVTAPEAIAVSTDSGSNFLRASNA-ASIRDAAELPAKLPADADGFIIATGAAKNKTYFRWVDLERKWDEDASRGAQAEL 301 (777) T ss_pred EEEEecCceeEecCCcCccceeeee-EEEeeccccccccccccceEEEeCCCCCCceEEEEEccCcEEEEeecccccccc Confidence 00000000000000 000001112221100 0000000000001112222210000 00 0000 Q ss_pred ccCCCcceEEEeeecCcccceeeeeccccc-ccccce--eeecchhhccCCceeeeeecceeEEeeecceeecccccCCc Q lcl|Aclame:pro 271 YETARGFFIIDAMARGKSRLEEIVKLKQRY-PSLSFG--VSSLPQDETPGGASVVCEYAGRVWYAGFSGQIIDGDDQSPR 347 (771) Q Consensus 271 ~~aarG~yI~d~~~~~~s~~~~~~~~~~~~-p~~~~~--t~~~p~d~~~g~~t~v~~~aGRv~y~g~~~~~~~~~~~~p~ 347 (771) -+.|. +..+... +..-....+ +...+. +-+-|+= .-..+++|+=|-+|++++| |. T Consensus 302 ~t~p~------~l~~~~~---~~~~~~~~w~~r~~gd~~tn~~Psf-~g~~i~~v~f~q~RL~f~~------------~~ 359 (777) T protein:vir:80 302 IDMPL------RITYSAP---NFSLTALNYERRASGDATSNPALKF-TEQGISGMTTMQGRLVLLA------------GE 359 (777) T ss_pred cccce------EEEecCC---ceEeeccCCccccccccccCCCcee-cCCceeEEEEEcceeeeec------------CC Confidence 00000 0000000 000000000 000000 0011110 0122478999999999876 22 Q ss_pred ccceeEEEeeecchhhccccccCCCCcCchhhhhhhcCCCEEeecCC--CceeEEEeecceeEEEecceEEEEEecccce Q lcl|Aclame:pro 348 LVSYILFSQLVDSPADIVNCYQDGDPTSTEEPELVDTDGGFIRIEGA--HDIINLVNVGSAVMVVAANGIWMIQGGSDYG 425 (771) Q Consensus 348 ~~~yv~fSqli~s~~~lg~CyQ~~DPts~~~~dl~dtDGG~I~I~ga--~~Iv~mv~~~ssLlVft~nGVWal~G~S~~~ 425 (771) +|++||.=| |.+=+|.+.. .+.|+|--.+.+-+. ..|.+|++++..|+|||..+-|.|.|+ .. T Consensus 360 ---~v~~Srtgd--------~~nF~~~s~~--~~~DdDpI~~~~ss~~~~~i~~~v~~~~~L~i~T~~~e~~l~~~--~~ 424 (777) T protein:vir:80 360 ---YVCMSASGN--------PLRWFRASVS--TQSDDDPIEVAATAPVASPYEYAVAFNKDLVLFAKTHQGLVPGA--NL 424 (777) T ss_pred ---eEEEEeccC--------cccccccccc--CCCCCccEEEEEcCCcceeeeeeeecCCcEEEEecCceEEEeCC--Cc Confidence 588887522 2333455422 567888777766554 458899999999999999999999773 47 Q ss_pred eeecceeeeeeeeeeecCccceEEeCCeEEEEecC-----ceEEecccc--cCcccccccCchhhhhhhhhcChhHhcce Q lcl|Aclame:pro 426 FTATNYLVTKISEHGCSSPNSVVVVDNSFMYWGDD-----GIYHLTRNQ--YGDYVANNLTEKTIQKYYEKIPSDAILNA 498 (771) Q Consensus 426 fsAt~y~V~KISd~GcvspnSIV~id~aVvYwSDs-----GI~~L~~ne--~g~~ss~nLte~tIqt~~~sip~~~k~~~ 498 (771) ++.++-.+.++|..+|.+-=.=+.+|++++|.+.+ +|+.+..++ ..-+.+++||.. ++.|..+ + ... T Consensus 425 lTP~~~~~~~~s~~~~~~~~~Pv~vG~~v~Fv~~r~g~~s~v~e~~~~~~~~d~y~a~Dlt~~-~~hl~~~-~-v~~--- 498 (777) T protein:vir:80 425 LTSRNATAAVVTEYSFQNSCSPVVAGRTVFFASPRSGPWSAVWEMLPSQYTDAQVEASDSTSH-LPKYIAG-P-VRF--- 498 (777) T ss_pred ccceeEEEEEEEeeccCCCCCceEeCCeEEEEecCCCceeEEeeeeecccccCceehhHHHHH-HHHhcCC-c-eEE--- Confidence 99999999999999998877779999999999875 488888764 466788888877 5555443 1 111 Q ss_pred eEEEEeeccEEEEEecccccccccccceeEE---ecccccceeeeecceeccceeeeeeeeeeCCceeeecceEEeeccc Q lcl|Aclame:pro 499 TGFYDSYDKKVKWLYNTVLDGRTEPVTELVF---DLALGAFYPSKIGSLTAGRLPIPVGSVKIPPYKLVETGEEVTVASE 575 (771) Q Consensus 499 ~g~yD~~~~~v~wly~e~~d~~~~y~tElVf---~L~~~afY~~ki~s~~ags~~~~i~s~~vp~y~~~~t~~~V~v~~~ 575 (771) ..|=.-...+.|+..+ | +..+.=+++. +..-.||.+|.+. |....++ .+.=-.|-++.....+-++-= T Consensus 499 -~a~s~~p~~v~~~~~~--d-g~l~~~ty~~~~~e~~v~aW~r~~~~----g~v~~v~-~i~d~l~~iv~r~~~~~le~~ 569 (777) T protein:vir:80 499 -LATSSTTSIVVVGTSN--L-RELVVHEYLWQGGEKVHAAWHKWSFP----QDITGAY-FRGDRLILLFHVAGRVILGEL 569 (777) T ss_pred -EEEcCCCceEEEEEcC--C-CeEEEEEEeecCCceEEEeeEEeccC----CcEEEEE-EECCEEEEEEEcCCeEEEEEE Confidence 1232456677787542 1 2211100111 1223499999663 3322111 110001111111110000000 Q ss_pred ceeeccceeeeeeeeeeeeeeee-EEEEEEEcCCCceEEEeeecCCchh----------------------hccccCC-- Q lcl|Aclame:pro 576 QVTATGELVTVKVSTRSPVIRET-KYIIVEKLSSPMRISFGGYTDEEFV----------------------DWKSVDG-- 630 (771) Q Consensus 576 ~vv~~~~~v~~~~~~~~~~~r~~-~y~~~~~~g~~~~~sF~~~~~d~F~----------------------Dw~~~~~-- 630 (771) +.- .....+.....+.|. .-....-++....-+|..=+..+.. ++...++ T Consensus 570 ~~~-----~~~d~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~v 644 (777) T protein:vir:80 570 FMQ-----RLGDAQSIPGGFLDLYRVGAANADEEVAIPAFAADLYPEDSTFAYKLSGEFQSLGQRCGDRRVDGATVYIKV 644 (777) T ss_pred eec-----cCCCCcccceeeeeeeeeeeeeeCCccceeEeeccccCCcceeEEEecCcccccceeeeeEEeCCceeeEEE Confidence 000 000000000000000 0000000111100000000000000 0000000 Q ss_pred cc-cchhHhhhhhccccccceeeeecceEEEEEeeecceeEecccceEEEcCccceEEEEEEeeccCCC-------CCcc Q lcl|Aclame:pro 631 IG-VDAPAYLLTGYLAGGDYQREKFVPYITFHFKKTEDGFVEDAEGDWTPTNQSSCMVQSQWSWTNSPA-------SNKW 702 (771) Q Consensus 631 ~g-vd~~sy~~tgy~~~gd~~r~K~~pyl~~~~~~TEd~~t~d~~g~~~~~n~SScl~~~~w~~s~~~~-------~~kw 702 (771) .+ ..+ +-+.-|+.+.-.+. -+..+| |.|+|-..- +| . -=+-++..++-+++. ..+. T Consensus 645 ~~~~~~-~~v~VGl~y~s~~~------~~~~~~-~~~~g~~~~-~~------r-~~i~r~~~~~~~sg~~~v~v~~~~~~ 708 (777) T protein:vir:80 645 VGAQAG-DQYRIGLRYLSKLG------PTRPIL-RDPNGVPIT-TE------R-TQLHRLTWSLDSTGEVTFRVADQARG 708 (777) T ss_pred cCCCCC-CEEEEeeeeEEEEE------eCceEE-eCCCCceee-ec------C-eEEEEEEEEeeccccEEEEEcCCCCc Confidence 00 000 00111111111100 011111 233432211 11 1 012234444444431 1111 Q ss_pred cchheeee-----eeehcccCCCCcCCCCcceeeeeccccceeeeEEEEEEEecCCCceEEEeEEEEEEeecCC Q lcl|Aclame:pro 703 GRTWQAYR-----FRRHFFPDNIDNQFDDGNSVVETKSRLRGSGKVLSLYITTEPKKNLHIYGWSMLVDVNGTV 771 (771) Q Consensus 703 ~~~~q~Yr-----~~r~~~p~~~~~~f~~~~~VV~TK~~~RG~G~~~~~~f~se~~KD~~llG~~~~~~~~g~~ 771 (771) .-.|+ +....++.+.+..+ .+ .+ +..+||..+-.+++++++.-..|+||+.+.+.+.+=+- T Consensus 709 ---~~~~~~~~~~~~~~~~~~g~~~~~-tg--~~--~vp~~~~~~~~~v~i~~d~P~P~tilsi~~e~~y~~r~ 774 (777) T protein:vir:80 709 ---ESAYTTTPLRLYSRDLGAGLPLAA-TA--TL--DTPARVDMQTAQFSLETDDYYDMNITSLEYGFRYNQRY 774 (777) T ss_pred ---ceeeeecCceeccccccccccccc-ce--EE--EEEEeecCcceEEEEEECCCCceEEEEEEEEEEeeccc Confidence 11122 22212222222221 22 22 24568999999999999999999999998887776555 No 19 >protein:vir:97014 Length: 800 # NCBI annotation: 33 # Family: family:all:825 # MgeID: mge:1644 # MgeName: K1-5 # Cross-refs: genbank:acc:YP_654134;genbank:gi:108862018;genbank:GeneID:5075963 Probab=99.54 E-value=1.9e-12 Score=84.82 Aligned_cols=680 Identities=13% Similarity=0.090 Sum_probs=276.1 Q ss_pred CchhhhhhhhccccceeeeccchhcCCCCccccceeeeeccccchhhhhcceeecCCceeecceeec-cCceeeeeechh Q lcl|Aclame:pro 1 MAKTTNAAEFNTFVGGLITEASPLTFPQNASIDEVNFILNRDGSRNRRNGMDFENGATKVVCNTLVP-ADGTIAVTSHNW 79 (771) Q Consensus 1 Ma~~~~~~e~ntFv~GliTEan~Lt~P~nas~De~N~~L~k~G~r~RR~Gl~~E~s~~~~l~~~~~~-s~~~~~vt~~~W 79 (771) |-.++. +-.|.+| |-.--++-==++.-.+-+||+...-|--+||-|+.+.. . ...+ ..+ ...-|-. T Consensus 1 ~~v~~s---~~n~~~G-vSqq~d~~R~~~q~~~~~N~~~~~~gGl~rRpGt~fva--~-----l~~~~~~~--~~~~~~~ 67 (800) T protein:vir:97 1 MEVQGS---LGRQIQG-ISQQPPAVRLDGQCTAMVNMIPDVVNGTQSRMGTTHIA--K-----ILDAGTDD--MATHHYR 67 (800) T ss_pred CeeEee---chhhhcc-cccCchhHhhhhhhhhhhcceeccccccccCCchhhhe--e-----ecCCCccc--ceeEEEE Confidence 766654 4456777 44443333334555678999999888888999977663 1 1111 112 1111111 Q ss_pred hhccCccceeEEEEEE-ccEEEEEecCCceeeheeeE---eeecceeCCCcceeeEEeeEEEEEEcCCcceEEEeccCCc Q lcl|Aclame:pro 80 ENAGGEVGRWISLVQV-GTELKFFQTTGETLSEGNFY---NYQFVNMSPSHKLSYAVVDGLLVVANGSRDIYVFEYDSGS 155 (771) Q Consensus 80 ~~~~g~v~~~~l~~q~-g~~l~~~d~t~~~lSn~~l~---~~~fv~~sP~~~is~~~v~G~lVva~~~~~~~i~~~~~~s 155 (771) . ++..-...++.. |.-++||+..+.-+....-. -|.-..-.|-+.|+++.+.....|+++..++....-..-. T Consensus 68 ~---~d~~eq~~v~~~~~~~~rv~~~~G~~~~v~~~~~~~~y~~~~~~~~~~l~~~tvaD~~fi~n~~~~~~~~~~~~~~ 144 (800) T protein:vir:97 68 R---GDGDEEYFFTLKKGQVPEIFDKYGRKCNVTSQDAPMTYLSEVVNPREDVQFMTIADVTFMLNRRKVVKASSRKSPK 144 (800) T ss_pred E---cCCceEEEEEEEcCCEEEEEecCCcEEEEecCCcceEEEeccCCCccceeEEEEcCEEEEeeCceecccccccccC Confidence 1 111123344455 55589998865443111111 1110111233459999999999999987665321110000 Q ss_pred eeeEEEEEEEEEe-eeeccc---cccCcc-----eeccccccCCCccCchhh-eeeeeccccceeee------------- Q lcl|Aclame:pro 156 VSVTTKRLLVRDL-FGVQDI---VNGVDL-----RQGNDIATRPTVQTNAHI-YNLRNQTFGVPRVT------------- 212 (771) Q Consensus 156 ~~~~t~~l~iRd~-~~l~d~---~~g~~~-----~~~~~~~~rpttlS~eh~-YnL~NqgW~~~~~~------------- 212 (771) ..... -+.+|-- ++-+ | ++|... ..+.+ ++.+...+.+.+ ..|.++-|+....+ T Consensus 145 ~~~~~-~~~v~~g~y~~~-y~i~I~~~~~~~~~t~~~t~-~~~~~~~~~~~ia~ql~~~~~~~~~~~~~t~~~~G~~~~i 221 (800) T protein:vir:97 145 VGNKA-IVFCAYGQYGTS-YSIVINGANAASFKTPDGGS-ADHVEQIRTERITSELYSKLQQWSGVSDYEIQRDGTSIFI 221 (800) T ss_pred CCcce-EEEEeeccccee-eeeccCCcceEEEEEcCCCC-cccceeccHHHHHHHHHHhhhccccccceEEEeCCcEEEE Confidence 10010 1112211 1100 0 001000 00110 111111111111 11222222111000 Q ss_pred ---------eccCCCCcc--e--EEEccccccCCcCcchheeecc----ccccCCCcccccccchhhhhccccccc--cC Q lcl|Aclame:pro 213 ---------WHSNEPSDP--I--VTFRSAASGKFPSNSDSVNLAL----SKRADVEPSTTDRFRAEDIVLNPIGTY--ET 273 (771) Q Consensus 213 ---------~~s~s~~~~--v--v~~~~~~~G~yPSnaD~~n~~~----~~~s~~e~~~~~~F~~~~~~~n~~Gs~--~a 273 (771) ..+..++.. + +...-...+..|+++ .+.+. +..+..++.-+-+|++... ..|+. .+ T Consensus 222 ~~~~~~~~~v~t~~g~~~~~~~~~~~~v~~~~~lp~~~--~~g~~v~i~~~~~~~~~~y~~~~~~~~~---~~~~w~e~~ 296 (800) T protein:vir:97 222 ERRDGASFTITTTDGAKGKDLVAIKNKVSSTDLLPSRA--PAGYKVQVWPTGSKPESRYWLQAEPKEG---NLVSWKETI 296 (800) T ss_pred EEcCCceEEEEecCCcCceeeeEEeeeccchhhchhhC--CCCcEEEEEccCCCCCceEEEEEEeccc---CcceEEEee Confidence 000000000 0 000111112222221 11110 1111111112233333211 11111 11 Q ss_pred CCcceEE-Ee------eec----Ccccceeeeecccccccccceeeecch-----hhccCCceeeeeecceeEEeeecce Q lcl|Aclame:pro 274 ARGFFII-DA------MAR----GKSRLEEIVKLKQRYPSLSFGVSSLPQ-----DETPGGASVVCEYAGRVWYAGFSGQ 337 (771) Q Consensus 274 arG~yI~-d~------~~~----~~s~~~~~~~~~~~~p~~~~~t~~~p~-----d~~~g~~t~v~~~aGRv~y~g~~~~ 337 (771) +.|.++- |. ..+ ...+.-++-.+.-..+. .+-+..-|. ....+.|++|+=|-+|++++| T Consensus 297 ~~~~~~~~~~~tmp~~~~~~~~~~~~g~~~~~~~~w~~r~-~gd~~tnp~p~f~~~~~~~~~~~v~f~q~RL~f~~---- 371 (800) T protein:vir:97 297 AADVLLGFDKGTMPYIIERTDIINGIAQFKIRQGDWEDRK-VGDDLTNPMPSFIDEEVPQTIGGMFMVQNRLCFTA---- 371 (800) T ss_pred ccccccceecccceEEEEEeecccccceeEEEeccccccc-cCccccCccccccCCcCCCCceeEEEEeeeEEEec---- Confidence 1111110 00 000 00000000000000000 011111111 123367999999999999976 Q ss_pred eecccccCCcccceeEEEeeecchhhccccccCCCCcCchhhhhhhcCCCEEeecCC--CceeEEEeecceeEEEecceE Q lcl|Aclame:pro 338 IIDGDDQSPRLVSYILFSQLVDSPADIVNCYQDGDPTSTEEPELVDTDGGFIRIEGA--HDIINLVNVGSAVMVVAANGI 415 (771) Q Consensus 338 ~~~~~~~~p~~~~yv~fSqli~s~~~lg~CyQ~~DPts~~~~dl~dtDGG~I~I~ga--~~Iv~mv~~~ssLlVft~nGV 415 (771) |. +|++||.=| |.+=.|.++. .+.|+|--.+.+-+. ..|.+|+++++.|++||..+- T Consensus 372 --------~~---~v~~Srtgd--------~~nF~~~t~~--~~~DdD~I~~~~ss~~v~~i~~~v~~~~~L~i~T~~~q 430 (800) T protein:vir:97 372 --------GE---AVIASRTSY--------FFDFFRYTVI--SALATDPFDIFSDASEVYQLKHAVTLDGATVLFSDKSQ 430 (800) T ss_pred --------CC---eEEEEecCC--------cccccccccc--CCCCCccEEEEecCCcceeeeEEeecCCcEEEEecCcE Confidence 22 699988522 2233344433 467888888877765 568899999999999999999 Q ss_pred EEEEecccceeeecceeeeeeeeeeecCccceEEeCCeEEEEecCc----eEEecccc-cCcccccccCchhhhhhhhhc Q lcl|Aclame:pro 416 WMIQGGSDYGFTATNYLVTKISEHGCSSPNSVVVVDNSFMYWGDDG----IYHLTRNQ-YGDYVANNLTEKTIQKYYEKI 490 (771) Q Consensus 416 Wal~G~S~~~fsAt~y~V~KISd~GcvspnSIV~id~aVvYwSDsG----I~~L~~ne-~g~~ss~nLte~tIqt~~~si 490 (771) |.|+|+ ..++.++..+.++|..+|.+.=.=+.+|++++|.+.+| |+.+..+. ..-..+++||.. ++.|.. T Consensus 431 ~~ls~~--~~lTP~~~~~~~~s~~~~~~~~~Pv~vG~~v~fv~~~g~~s~vre~~~~~~~d~~~a~DlT~~-~~hl~~-- 505 (800) T protein:vir:97 431 FILPGD--KPLEKSNALLKPVTTFEVNNKVKPVVTGESVMFATNDGSYSGVREFYTDSYSDTKKAQAITSH-VNKLIE-- 505 (800) T ss_pred EEEeCC--CcccceeEEEEEEEeeeccCCCCcEEeCCeEEEeeCCCCeeEEEEEeeeecccceehhhHHHH-HHHhcC-- Confidence 999874 37999999999999999998888899999999999986 88888874 345678877775 444442 Q ss_pred ChhHhcceeEEEE-eeccEEEEEecccccccccccceeEE---ecccccceeeeecceeccceee---eeeeeeeCCcee Q lcl|Aclame:pro 491 PSDAILNATGFYD-SYDKKVKWLYNTVLDGRTEPVTELVF---DLALGAFYPSKIGSLTAGRLPI---PVGSVKIPPYKL 563 (771) Q Consensus 491 p~~~k~~~~g~yD-~~~~~v~wly~e~~d~~~~y~tElVf---~L~~~afY~~ki~s~~ags~~~---~i~s~~vp~y~~ 563 (771) +....... ..++.+.|+. .-+.+..+.=+++. +..-+||.+|.+.. +-..- .++.. .|-+ T Consensus 506 -----~~v~~~~~~~~~~~~v~~~--~~~~~~l~~~~y~~~~~e~~~~aW~~~~~~~---~~~~~~~~~~~d~---l~~v 572 (800) T protein:vir:97 506 -----GNITNMAASTNVNRLLVTT--DKYRNIIYCYDWLWQGTDRVQSAWHVWKWPI---GTKVRGMFYSGEL---LYLL 572 (800) T ss_pred -----CceEEEEEeCCCCeEEEEE--EcCCCEEEEEEEeecCCceEEEeEEEEecCC---CeEEEEEEEcCCe---EEEE Confidence 22221111 1233333332 11222211101111 23346999996632 11110 01110 0111 Q ss_pred eecceEE---eecccceeeccce----------------------eeeeeeeeeeeeeeeEEEEEEEcCCC-----ceEE Q lcl|Aclame:pro 564 VETGEEV---TVASEQVTATGEL----------------------VTVKVSTRSPVIRETKYIIVEKLSSP-----MRIS 613 (771) Q Consensus 564 ~~t~~~V---~v~~~~vv~~~~~----------------------v~~~~~~~~~~~r~~~y~~~~~~g~~-----~~~s 613 (771) +.-...+ +++..+....++. ++.+.++.. .....+....++.- ..+- T Consensus 573 v~r~~~~~ler~~~~~~~~~~~~~~~~lD~~~~~~~~~~~~~~~~v~~~~~~~~---~~~~~~~~~~v~g~~~~~G~~v~ 649 (800) T protein:vir:97 573 LERGDGVYLEKMDMGDALTYGLNDRIRMDRQAELVFKHFKAEDEWVSEPLPWVP---TNPELLDCILIEGWDSYIGGSFL 649 (800) T ss_pred EEcCCcEEEEEEecccCcCcccccceeccccceeeeeeeecccceEeccccccC---CCcceeEEEEecccccccCceEE Confidence 1110000 0000000000000 000000000 00000000000000 0010 Q ss_pred EeeecCCchhhccccCCc---ccchhHhhhhhccccccceeeeecceEEEEEeeecceeEecccceEEEcCccceEEEEE Q lcl|Aclame:pro 614 FGGYTDEEFVDWKSVDGI---GVDAPAYLLTGYLAGGDYQREKFVPYITFHFKKTEDGFVEDAEGDWTPTNQSSCMVQSQ 690 (771) Q Consensus 614 F~~~~~d~F~Dw~~~~~~---gvd~~sy~~tgy~~~gd~~r~K~~pyl~~~~~~TEd~~t~d~~g~~~~~n~SScl~~~~ 690 (771) |. .+....|..+... +....+-+.-|+.+.-.+ --+..+++...+.---.+ . -=+-++. T Consensus 650 ~~---~~~~~~~~~~~~~~~~~~~~~~~v~vGl~Y~~~~------~~~p~~i~~~~g~~~~~~--------r-~~i~r~~ 711 (800) T protein:vir:97 650 FK---YNPSDNTLSTTFDMYDDSHVKAKVIVGQIYPQEF------EPTPVVIRDNQDRVSYID--------V-PVVGLVH 711 (800) T ss_pred EE---ecCccCcccccceEEeCCCCCcEEEEeeeeeEEE------EecceEEEecCCCceeec--------c-eEEEEEE Confidence 00 0011111111110 000001111122111111 011123332221110000 0 1133344 Q ss_pred EeeccCCCCC----cccc-hheee-eeeehcc-cCCCCcCCCCcceeeeeccccceeeeEEEEEEEecCCCceEEEeEEE Q lcl|Aclame:pro 691 WSWTNSPASN----KWGR-TWQAY-RFRRHFF-PDNIDNQFDDGNSVVETKSRLRGSGKVLSLYITTEPKKNLHIYGWSM 763 (771) Q Consensus 691 w~~s~~~~~~----kw~~-~~q~Y-r~~r~~~-p~~~~~~f~~~~~VV~TK~~~RG~G~~~~~~f~se~~KD~~llG~~~ 763 (771) +++-+++.-. +..+ ....| ...++.- |+.-... -+.++-. =+-.+||..+-.+++++++.--.|+||+.+. T Consensus 712 ~~~~~sg~~~~~v~~~~~~~~~~~~~~~~~~g~~~~~~g~-~~~~tg~-~~vp~~g~~~~~~v~i~~d~PlP~tvlsi~~ 789 (800) T protein:vir:97 712 LNLDMYPDFSVEVKNVKSGKVRRVLASNRIGGALNNTVGY-VEPREGV-FRFPLRAKSTDVVYRIIVESPHTFQLRDIEW 789 (800) T ss_pred EeecccccEEEEEccccCCceeeeecCccccccccccCCc-cccccce-EEEEeecccceeEEEEEECCCCcEEEEEEEE Confidence 4444442110 0011 00111 1111111 1111110 0111111 1225788899999999999999999999888 Q ss_pred EEEeecCC Q lcl|Aclame:pro 764 LVDVNGTV 771 (771) Q Consensus 764 ~~~~~g~~ 771 (771) +.+.+=+= T Consensus 790 eg~y~~r~ 797 (800) T protein:vir:97 790 EGSYNPTK 797 (800) T ss_pred EEEeeccc Confidence 77665443 No 20 >protein:vir:99677 Length: 794 # NCBI annotation: Tail tubular protein B # Family: family:all:825 # MgeID: mge:1523 # MgeName: VP4 # Cross-refs: genbank:acc:YP_249591;genbank:gi:68299742;genbank:GeneID:3799992 Probab=99.50 E-value=4.9e-12 Score=82.61 Aligned_cols=673 Identities=12% Similarity=0.113 Sum_probs=278.1 Q ss_pred CchhhhhhhhccccceeeeccchhcCCCCccccceeeeeccccchhhhhcceeecCCceeecceeeccCceeeeeechhh Q lcl|Aclame:pro 1 MAKTTNAAEFNTFVGGLITEASPLTFPQNASIDEVNFILNRDGSRNRRNGMDFENGATKVVCNTLVPADGTIAVTSHNWE 80 (771) Q Consensus 1 Ma~~~~~~e~ntFv~GliTEan~Lt~P~nas~De~N~~L~k~G~r~RR~Gl~~E~s~~~~l~~~~~~s~~~~~vt~~~W~ 80 (771) ||+-.+ -+..|.+| |-.--+|.==++.-..-+||+...-|--+||-|+-+.-. |...-.+..+..++.- + T Consensus 1 M~~i~~--s~~n~~~G-vS~q~D~~ry~~q~~~~~N~~~~~~gG~~rRpG~~fv~~----l~~~~~~~~~~~l~~f---~ 70 (794) T protein:vir:99 1 MALISQ--SIKNLKGG-ISQQPDILRYSDQGSKQINGFSSEVEGLQKRPPSVHIKR----LTDQFGLGQKPYCHII---N 70 (794) T ss_pred Cceeee--ecchhhcc-eecCCchHHhhhhHhhhhcceeeeccCcccCCccceeee----ecCCCCCccccEEEEE---E Confidence 997654 45789999 444444443345566789999998888899999887641 1111111111111111 1 Q ss_pred hccCccceeEEEEEEccEEEEEecCCceeeheeeE-eeecc-eeCCCcceeeEEeeEEEEEEcCCcceEEEe-------c Q lcl|Aclame:pro 81 NAGGEVGRWISLVQVGTELKFFQTTGETLSEGNFY-NYQFV-NMSPSHKLSYAVVDGLLVVANGSRDIYVFE-------Y 151 (771) Q Consensus 81 ~~~g~v~~~~l~~q~g~~l~~~d~t~~~lSn~~l~-~~~fv-~~sP~~~is~~~v~G~lVva~~~~~~~i~~-------~ 151 (771) - +..- ..++..-+..+++|+..+..+-....- ..... ...|...|+++.+...+.|+++.-++..+. + T Consensus 71 ~--~~~~-~y~l~f~~~~irv~~~~~g~~~~v~~~~~~~y~~~~~~~~~l~~~q~aD~~fi~n~~~~p~~~~~~~~~~~~ 147 (794) T protein:vir:99 71 R--DEVE-RYAVFFTGSNIRVFDLFTGDEKTVNAPNGLSYVSSSNPRKDLRMVTVADYTFILNRNVATAQGTTNTPSGLA 147 (794) T ss_pred e--CCCc-eEEEEEcCCeEEEEECCCCeEEEeeccccccccccCCccceeeEEEEccEEEEEcCCeeeeEeeeeccccCc Confidence 1 1111 223333456688887543322111110 11100 112333599999999999999888764332 1 Q ss_pred cCCceee---------EEEEEEEEEee----eeccccccCcceec--cccccC----------CCccCchhheeeeeccc Q lcl|Aclame:pro 152 DSGSVSV---------TTKRLLVRDLF----GVQDIVNGVDLRQG--NDIATR----------PTVQTNAHIYNLRNQTF 206 (771) Q Consensus 152 ~~~s~~~---------~t~~l~iRd~~----~l~d~~~g~~~~~~--~~~~~r----------pttlS~eh~YnL~NqgW 206 (771) +.+..+. .+..|.|.-.. ...+-..+....+. +-+++. .-+.-.-..|-....+. T Consensus 148 ~~~~~~~~~v~~g~y~~~y~v~i~gs~ta~~~tp~~~~~~~~~~~s~~~ia~~l~~~l~~~g~~v~~~~g~~~i~~~~~~ 227 (794) T protein:vir:99 148 PFGHFGLVVIRGGQYGRTYRIKVNGSVEASFETPLGDQVAHAKQIDIAYIIDQLAAGLINKGWAVTKGSGYFYFSKSGSV 227 (794) T ss_pred CCCceEEEEeccCCCCceEEEEecCCcccceeeccCcccccccccchhhhhhhhHhhhhcccceEEeCCeEEEEEecCCc Confidence 1111111 01112221100 00000000000000 000000 00000001111111222 Q ss_pred cceeeeeccCCCCcce---EEEccccccCCcCc----------------chheeecc--ccccCCCcccccccchhhhhc Q lcl|Aclame:pro 207 GVPRVTWHSNEPSDPI---VTFRSAASGKFPSN----------------SDSVNLAL--SKRADVEPSTTDRFRAEDIVL 265 (771) Q Consensus 207 ~~~~~~~~s~s~~~~v---v~~~~~~~G~yPSn----------------aD~~n~~~--~~~s~~e~~~~~~F~~~~~~~ 265 (771) ......+.+. .+++. +.-.-......|.+ +|.++... +...|.|.....++...+... T Consensus 228 ~v~t~s~~~g-~~~t~~~~~~~~v~~~~~Lp~~~~~G~~v~v~~~~~~~~~~y~v~~~~~~~~w~e~~~~~~~~~~~~~t 306 (794) T protein:vir:99 228 IINSLEVEDG-YNGQLAWGIINDVQKTTQLPVYAPNNYIIRVSGDPTLNQDDYYVRFDASRNVWTECPAPNIKADYNKAT 306 (794) T ss_pred eeEEEEeecC-CCCceeeEEeeeccceeecccCCCCCeEEEEeccCCCCCCceEEEEEcCCceEEeeccceeecceeccc Confidence 2211111110 01110 00000011112221 11111111 001111111111100000000 Q ss_pred cccccccCCCcceEEEeeecCcccceeeeeccccccc-ccceeeecchhhccCCc-eeeeeecceeEEeeecceeecccc Q lcl|Aclame:pro 266 NPIGTYETARGFFIIDAMARGKSRLEEIVKLKQRYPS-LSFGVSSLPQDETPGGA-SVVCEYAGRVWYAGFSGQIIDGDD 343 (771) Q Consensus 266 n~~Gs~~aarG~yI~d~~~~~~s~~~~~~~~~~~~p~-~~~~t~~~p~d~~~g~~-t~v~~~aGRv~y~g~~~~~~~~~~ 343 (771) .|.--...+.|-|-+.+. .+.. ..+-...-|.-.-.|+| ++|+=|-+|+++++- T Consensus 307 ~p~~~v~~~~~~~~~~~~---------------~w~~r~~Gd~~tnp~psf~g~~is~v~f~q~RL~f~~~--------- 362 (794) T protein:vir:99 307 MPHVLIREADGTFTFKQA---------------DWTHRAAGDDETNPYPSFIGNSINDIFFFRNRLGFLSG--------- 362 (794) T ss_pred eEEEEeccCCCceeEeec---------------cccccccCCcccCCCccccCcceeEEEEEeeeEEEecC--------- Confidence 000000011222211110 0100 01111111222234555 889999999988741 Q ss_pred cCCcccceeEEEeeecchhhccccccCCCCcCchhhhhhhcCCCEEeecC--CCceeEEEeecceeEEEecceEEEEEec Q lcl|Aclame:pro 344 QSPRLVSYILFSQLVDSPADIVNCYQDGDPTSTEEPELVDTDGGFIRIEG--AHDIINLVNVGSAVMVVAANGIWMIQGG 421 (771) Q Consensus 344 ~~p~~~~yv~fSqli~s~~~lg~CyQ~~DPts~~~~dl~dtDGG~I~I~g--a~~Iv~mv~~~ssLlVft~nGVWal~G~ 421 (771) .+|++||.=| |.+=.|.+.. .+.|+|--.+.+-+ ...|.+|+++++.|++||..+-|.|.|+ T Consensus 363 ------~~v~~Srtgd--------~~nF~~~t~~--~~~DdD~I~~~~~~~~~~~i~~~v~~~~~L~l~t~~~q~~l~~~ 426 (794) T protein:vir:99 363 ------ENVILSGSGN--------YFNFFPESVA--VLTDTDPIDVAVSTNRISILKYAVPFSEELILWSDQAQFVLSSD 426 (794) T ss_pred ------CeEEEEecCC--------cccccccccc--CCCCCccEEEEecCCcceeeEEEeecCCcEEEEecCcEEEEeCC Confidence 2699988522 2233344322 46677776666554 4568899999999999999999999884 Q ss_pred ccceeeecceeeeeeeeeeecCccceEEeCCeEEEEecCc----eEEec-cc-ccCcccccccCchhhhhhhhhcChhHh Q lcl|Aclame:pro 422 SDYGFTATNYLVTKISEHGCSSPNSVVVVDNSFMYWGDDG----IYHLT-RN-QYGDYVANNLTEKTIQKYYEKIPSDAI 495 (771) Q Consensus 422 S~~~fsAt~y~V~KISd~GcvspnSIV~id~aVvYwSDsG----I~~L~-~n-e~g~~ss~nLte~tIqt~~~sip~~~k 495 (771) ..++.++-.+.++|..+|.+-=.=+.+|++++|.+.+| |++.. .+ +..-..+++||.. ++.|.. T Consensus 427 --~~lTP~~~~~~~~s~~~~~~~~~Pv~vg~~v~f~~~~g~~~~v~r~~~~~~~~d~y~a~Dlt~~-~~hl~~------- 496 (794) T protein:vir:99 427 --GGLTPTTIRLDLTTEFEVTEQARPYGIGRGVYFVSPRAKFSSVRRFYAVQDVTQVKNAEDISAH-VPYYVE------- 496 (794) T ss_pred --CcccceeEEEEEEEEeeccCCCCceEeCCeEEEEecCCCeeEEEEeeeeccccCceehhhHHHH-HHHhcC------- Confidence 37999999999999999998888899999999999998 55543 23 3455667777765 333332 Q ss_pred ccee--EEEEeeccEEEEEecccccccccccceeEE---ecccccceeeeecceeccceeeeeeeeeeCCceeeecceEE Q lcl|Aclame:pro 496 LNAT--GFYDSYDKKVKWLYNTVLDGRTEPVTELVF---DLALGAFYPSKIGSLTAGRLPIPVGSVKIPPYKLVETGEEV 570 (771) Q Consensus 496 ~~~~--g~yD~~~~~v~wly~e~~d~~~~y~tElVf---~L~~~afY~~ki~s~~ags~~~~i~s~~vp~y~~~~t~~~V 570 (771) .... ..|=.-...+.|.-. +-+..+.=+++. +..-.||.+|.+. |...++|... . .+.--+ T Consensus 497 ~~~~~~~a~~~~~~~~v~~~~---~~g~l~~~~y~~~~~eq~v~aW~~~~~~----g~~~~~~~~~-~------~d~l~~ 562 (794) T protein:vir:99 497 NGVFKMSGSSTENFLTILTEG---NEQRVYFYKFLYLQEQLVQQSWSHWDFG----VNCRVLCCDM-I------GAVMHL 562 (794) T ss_pred CCeEEEEEeCCCCcEEEEEEc---CCCEEEEEEEeecCCceEEEeEEEEEcC----CCeEEEEEEE-c------CCEEEE Confidence 2211 122233446666643 222211101122 2233599999763 3322222110 0 011111 Q ss_pred eecccceeeccceeeeeeeeeeeeeeeeEEEEEEEcCCCceEEEeeecCCchh--------------------------- Q lcl|Aclame:pro 571 TVASEQVTATGELVTVKVSTRSPVIRETKYIIVEKLSSPMRISFGGYTDEEFV--------------------------- 623 (771) Q Consensus 571 ~v~~~~vv~~~~~v~~~~~~~~~~~r~~~y~~~~~~g~~~~~sF~~~~~d~F~--------------------------- 623 (771) -+.-.. +..+.-+-.......+.+..|-+..|-+....+.=..|+.++++ T Consensus 563 ~v~r~~---~~~ler~~~~~~~~~~~~~~~~~~lD~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~g~~v~~~~dg~~ 639 (794) T protein:vir:99 563 IIDSPS---GVLMEKIEFTQNTKDYPDEPYRLYVDRKIEYTFPEGSYNDDDFKTRVKLKDIYGSTPANGQYVFISLGGVT 639 (794) T ss_pred EEEeCC---CEEEEEEEeeeCCCCCCCcccceeeeeeeeeeecccccccCcceeEEeccccccccccCCceEEEEeCCce Confidence 000000 00000000000000001111111111111111111123333222 Q ss_pred --------hccccCCcc-c--chh-HhhhhhccccccceeeeecceEEEEEeeecceeEecccceEEEcCcc-ceEEEEE Q lcl|Aclame:pro 624 --------DWKSVDGIG-V--DAP-AYLLTGYLAGGDYQREKFVPYITFHFKKTEDGFVEDAEGDWTPTNQS-SCMVQSQ 690 (771) Q Consensus 624 --------Dw~~~~~~g-v--d~~-sy~~tgy~~~gd~~r~K~~pyl~~~~~~TEd~~t~d~~g~~~~~n~S-Scl~~~~ 690 (771) +|...+++. + |++ +-+.-|+.+.-.+ --+..++++.+ ..|...-.-.. -.+-++. T Consensus 640 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~vGl~y~s~~------~~~~~~~~~~~------~~g~~~~~~~gr~~l~r~~ 707 (794) T protein:vir:99 640 FTFDPPAGGWQANDGLIEFDGDLRGTKFFVGEAYTFLY------EFSKFLIKTTD------TADGVATEDIGRLQLRRAW 707 (794) T ss_pred eeeecccceEecCccEEEecCCCCCcEEEEeeeeeEEE------eecceEEeecC------CCCceeeeccceEEEEEEE Confidence 111110000 0 000 0011111111110 01122222221 11211111111 2344666 Q ss_pred EeeccCCCCC-cccchheeeeee----ehcccCCC---CcCCCCcceeeeeccccceeeeEEEEEEEecCCCceEEEeEE Q lcl|Aclame:pro 691 WSWTNSPASN-KWGRTWQAYRFR----RHFFPDNI---DNQFDDGNSVVETKSRLRGSGKVLSLYITTEPKKNLHIYGWS 762 (771) Q Consensus 691 w~~s~~~~~~-kw~~~~q~Yr~~----r~~~p~~~---~~~f~~~~~VV~TK~~~RG~G~~~~~~f~se~~KD~~llG~~ 762 (771) +++.+++.-. ..+++..-+.+. |.--|+.. ... ..| ++ +.-+||.-+-.+++++++.--.|+||+-+ T Consensus 708 ~~~~~tg~~~v~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~-~tg--~~--~vp~~g~~~~~~v~i~~d~P~P~tvlsi~ 782 (794) T protein:vir:99 708 VNYDKSGNFRVEVNNQGRTFTYNMTGNRLSTNELILGDESL-DTG--QF--RYAVSGNATQVTVSLISDTPNPLSIIGGG 782 (794) T ss_pred EEeecccceEEEECCCccceeeecccccccccccccccccc-ccc--eE--EEEecccccceEEEEEECCCCCEEEEEEE Confidence 6666554210 001111112221 11112211 111 112 22 23467887899999999999999999988 Q ss_pred EEEEeecCC Q lcl|Aclame:pro 763 MLVDVNGTV 771 (771) Q Consensus 763 ~~~~~~g~~ 771 (771) .+.+.+=.= T Consensus 783 ~e~~y~~r~ 791 (794) T protein:vir:99 783 WEGYYVRRS 791 (794) T ss_pred EEEEEeccc Confidence 777665443 No 21 >protein:vir:94713 Length: 785 # NCBI annotation: tail tube # Family: family:all:825 # MgeID: mge:1528 # MgeName: K1F # Cross-refs: genbank:acc:YP_338122;genbank:gi:77118200;genbank:GeneID:3707736 Probab=99.50 E-value=4.9e-12 Score=82.57 Aligned_cols=674 Identities=14% Similarity=0.106 Sum_probs=283.4 Q ss_pred CchhhhhhhhccccceeeeccchhcCCCCccccceeeeeccccchhhhhcceeecCCceeecceeeccCceeeeeechhh Q lcl|Aclame:pro 1 MAKTTNAAEFNTFVGGLITEASPLTFPQNASIDEVNFILNRDGSRNRRNGMDFENGATKVVCNTLVPADGTIAVTSHNWE 80 (771) Q Consensus 1 Ma~~~~~~e~ntFv~GliTEan~Lt~P~nas~De~N~~L~k~G~r~RR~Gl~~E~s~~~~l~~~~~~s~~~~~vt~~~W~ 80 (771) ||+-. --+..|.+| |.+--++.==++.-..-+||+..--|--+||-|+.+..... .......+ .+.++ T Consensus 1 M~~~~--~s~~n~~~G-vSqq~D~~ry~~q~~~~~N~~~~~~gG~~rRpG~~~v~~l~-------~~~~~~~~--~~~f~ 68 (785) T protein:vir:94 1 MPLIT--QSIKNLKGG-ISQQPDILRFSDQGEAQVNCWSSESDGLQKRPPTVFKRRLN-------IDVGSNPK--FHLIN 68 (785) T ss_pred Cccee--eecchhhcc-eecCCchHHhhhHHhhhhcceeeeccCcccCChhHhhhccc-------CCCCcCcE--EEEEE Confidence 99665 457889999 55555444444666778999999888889999987754211 11111111 11121 Q ss_pred hccCccceeEEEEEEccEEEEEecCCceeeheeeEeeecceeCCCcceeeEEeeEEEEEEcCCcceEEEeccCCceee-- Q lcl|Aclame:pro 81 NAGGEVGRWISLVQVGTELKFFQTTGETLSEGNFYNYQFVNMSPSHKLSYAVVDGLLVVANGSRDIYVFEYDSGSVSV-- 158 (771) Q Consensus 81 ~~~g~v~~~~l~~q~g~~l~~~d~t~~~lSn~~l~~~~fv~~sP~~~is~~~v~G~lVva~~~~~~~i~~~~~~s~~~-- 158 (771) -.. .. .++++.-+.-+++|+..+.-+....-.-|. ....|.+.|+++.+...+.|+++.-++.-..-.+..... T Consensus 69 ~~~--~~-~y~l~~~~~~irv~~~~G~~~~v~~~~~y~-~~~~~~~~l~~~q~aD~~fi~n~~~~~~~~~~~~~~~~~~~ 144 (785) T protein:vir:94 69 RDE--QE-QYYIVFNGSNIQIVDLSGNQYSVSGSVDYV-KSSNPRDDIRVVTVADYTFVVNRKVVVKGGSEKSHSGYNRK 144 (785) T ss_pred eCC--Cc-eEEEEEcCCeEEEEecCCcEEEEecCCCce-eecCchhheeeEeeCCEEEEEcCCcceeeeeccCCcCCCCC Confidence 111 11 133333456789998764433211111222 122344469999999999999998877544333222100 Q ss_pred EEEEEEEEEe-eeec--cccccCc-----ceeccccccCCCccCchhh-eee----eec--ccccee------------- Q lcl|Aclame:pro 159 TTKRLLVRDL-FGVQ--DIVNGVD-----LRQGNDIATRPTVQTNAHI-YNL----RNQ--TFGVPR------------- 210 (771) Q Consensus 159 ~t~~l~iRd~-~~l~--d~~~g~~-----~~~~~~~~~rpttlS~eh~-YnL----~Nq--gW~~~~------------- 210 (771) +.--+.+|.- ++.. -.++|+. ...+.+....|...+.+++ ..| ++. +|..-+ T Consensus 145 ~~~~~~i~~g~y~~~y~i~i~g~~~at~~t~~~s~a~~s~~~~s~~~i~~~l~~~l~a~~t~~t~~~~g~~i~i~a~s~t 224 (785) T protein:vir:94 145 ARALINLRGGQYGRTLKVGINGGVKVSHKLPAGNDAENDPPKVDAQAIGAALRDLLVTAYPTFTFDLGSGFLLITAPSGT 224 (785) T ss_pred CceEEEecccccceeEEEeeCCcceeEEEEccCccccccccccchHHHHHHHHHHhhccccceeEEecCcEEEEEecCCc Confidence 0011122221 1100 0001100 0111122222333333321 011 111 121000 Q ss_pred ----eeeccCCCCcce-E--EEccccccCCcCcchheeecc----ccccCCCcccccccchhhhhccccccc--cCCCcc Q lcl|Aclame:pro 211 ----VTWHSNEPSDPI-V--TFRSAASGKFPSNSDSVNLAL----SKRADVEPSTTDRFRAEDIVLNPIGTY--ETARGF 277 (771) Q Consensus 211 ----~~~~s~s~~~~v-v--~~~~~~~G~yPSnaD~~n~~~----~~~s~~e~~~~~~F~~~~~~~n~~Gs~--~aarG~ 277 (771) .... .+.++.. . .-.-.+....|..+- |.+. +..+..++-.+=+|+... |.. .++.|. T Consensus 225 ~~~~~s~~-~~~~~t~~~~~~~~~~~~~~Lp~~~~--~G~~v~v~~~~~~~~~~y~v~~~~~~------g~w~e~~~~g~ 295 (785) T protein:vir:94 225 DINSVETE-DGYANQLISPVLDTVQTISKLPLAAP--NGYIIKIQGETNSSADEYYVMYDSNT------KTWKETVEPGV 295 (785) T ss_pred cccceeee-cccCCeEEEEEEeeccceeccccccC--CCCEEEEEccCCCCccceEEEEEcCC------ceEEEecccce Confidence 0000 0000110 0 000111112221110 0000 000000011111222110 110 011110 Q ss_pred eE-EE--ee----ecCcccceeeeecccccccccceeeecchhhcc-CCceeeeeecceeEEeeecceeecccccCCccc Q lcl|Aclame:pro 278 FI-ID--AM----ARGKSRLEEIVKLKQRYPSLSFGVSSLPQDETP-GGASVVCEYAGRVWYAGFSGQIIDGDDQSPRLV 349 (771) Q Consensus 278 yI-~d--~~----~~~~s~~~~~~~~~~~~p~~~~~t~~~p~d~~~-g~~t~v~~~aGRv~y~g~~~~~~~~~~~~p~~~ 349 (771) .+ ++ .| .+....--++.++.-..+ ..+-....|-.--. ..|++|+=|-+|+++++ |. T Consensus 296 ~~~~~~~tmp~~l~~~~~~~~~~~~~~w~~r-~~Gd~~tnp~psf~g~~~~~v~f~q~RL~f~~------------~~-- 360 (785) T protein:vir:94 296 VTGFDNTTMPHALVRQSDGSFEFKALDWSKR-GAGNDDTNPMPSFVDATINDVFFYRNRLGFLS------------GE-- 360 (785) T ss_pred eeeeeccccceEEEeccCCceEEeccccccc-cCCCcccCCcceecccccceEEEEeceEEEec------------CC-- Confidence 00 00 00 000000000000000000 00000000100011 24689999999999875 22 Q ss_pred ceeEEEeeecchhhccccccCCCCcCchhhhhhhcCCCEEeecCC--CceeEEEeecceeEEEecceEEEEEecccceee Q lcl|Aclame:pro 350 SYILFSQLVDSPADIVNCYQDGDPTSTEEPELVDTDGGFIRIEGA--HDIINLVNVGSAVMVVAANGIWMIQGGSDYGFT 427 (771) Q Consensus 350 ~yv~fSqli~s~~~lg~CyQ~~DPts~~~~dl~dtDGG~I~I~ga--~~Iv~mv~~~ssLlVft~nGVWal~G~S~~~fs 427 (771) +|++||.=| |.+=.|.+. ..+.|+|--.+.+-+. ..|..|+++++.|++||..+-|.|.| ++ .++ T Consensus 361 -~v~~Srtgd--------~~nF~~~t~--~~~~DdD~i~~~~~~~~~~~i~~~v~~~~~L~l~T~~~e~~l~~-~~-~lT 427 (785) T protein:vir:94 361 -NVIMSRSAS--------YFAFFPKSV--ATLSDDDPIDVAVSHPRISILKYAVPFSEQLLLWSDEVQFVMTS-SG-VLT 427 (785) T ss_pred -eEEEEccCC--------cccCccccc--cCCCCCccEEEEecCCcceeeEEEeecCCcEEEEecCcEEEEcC-CC-ccc Confidence 699988522 233345542 2577888888877765 56889999999999999999999976 33 799 Q ss_pred ecceeeeeeeeeeecCccceEEeCCeEEEEecCc----eEEecccc--cCcccccccCchhhhhhhhhcChhHhccee-- Q lcl|Aclame:pro 428 ATNYLVTKISEHGCSSPNSVVVVDNSFMYWGDDG----IYHLTRNQ--YGDYVANNLTEKTIQKYYEKIPSDAILNAT-- 499 (771) Q Consensus 428 At~y~V~KISd~GcvspnSIV~id~aVvYwSDsG----I~~L~~ne--~g~~ss~nLte~tIqt~~~sip~~~k~~~~-- 499 (771) .++..+.++|..+|.+-=.=+.+|++++|.+.+| |++....+ ..-..+++||.. ++.| ++.... T Consensus 428 P~~~~~~~~s~~~~~~~~~Pv~vg~~v~f~~~~g~~~~v~r~~~~~~~~d~y~~~dlt~~-~~~~-------~~g~~~~~ 499 (785) T protein:vir:94 428 SKSIQLDVGSEFALGDNARPFAVGRSVFFSAPRGSFTSIKRYFAVADVSDVKDADDTTGH-VLSY-------IPNGVFDI 499 (785) T ss_pred ceeEEEEEEEeeeccCCCCceEeCCeEEEEecCCCeeEEEeeeeecccccceehhhHHHH-HHHh-------cCCCcEEE Confidence 9999999999999988788899999999999988 55664433 344567777553 3222 222221 Q ss_pred EEEEeeccEEEEEecccccccccccceeEE---ecccccceeeeecceeccceee--eeeeeeeCCceeeecc-----eE Q lcl|Aclame:pro 500 GFYDSYDKKVKWLYNTVLDGRTEPVTELVF---DLALGAFYPSKIGSLTAGRLPI--PVGSVKIPPYKLVETG-----EE 569 (771) Q Consensus 500 g~yD~~~~~v~wly~e~~d~~~~y~tElVf---~L~~~afY~~ki~s~~ags~~~--~i~s~~vp~y~~~~t~-----~~ 569 (771) ..|=.-+..+.|.-.+ -+..+.=+++. +..-.||.+|.+.+. +-... .++.. .|-++... +. T Consensus 500 ~a~~~~~~~~~~~~~~---~g~l~~~~y~~~~~e~~v~aW~r~~~~~~--~~~~~~~~~~d~---~~~vv~r~~g~~~~~ 571 (785) T protein:vir:94 500 QGTGTENYICVNSTGA---YNRIYIYKFLFKDSVQLQASWSHWEFPKD--DKILASASIGST---MFIVRQHQGGVDIEH 571 (785) T ss_pred EEecCCCcEEEEEEcC---CCEEEEEEEeecCCceEEEEEEEEEeCCC--eEEEEEEEeCCE---EEEEEEcCCCEEEEE Confidence 2232344466676432 22111100110 233359999976431 01000 11110 01111110 01 Q ss_pred Ee---eccc--ceeecccee---------------------eeeeeeeeeeeeeeEEEEEEEcCCCceEEEeeecCCch- Q lcl|Aclame:pro 570 VT---VASE--QVTATGELV---------------------TVKVSTRSPVIRETKYIIVEKLSSPMRISFGGYTDEEF- 622 (771) Q Consensus 570 V~---v~~~--~vv~~~~~v---------------------~~~~~~~~~~~r~~~y~~~~~~g~~~~~sF~~~~~d~F- 622 (771) ++ ...+ ...-...++ ++..++.-..--+.+++.+.-+|......-..=.+..+ T Consensus 572 ie~~~~~~d~~~~~~~~~lD~~~~~~~~~~~~~~~~~~t~~~~~~~~~g~~~leg~~v~v~adG~~~~~~~v~~~~~tl~ 651 (785) T protein:vir:94 572 LKFIKEATDFPSEPYRLHVDSKVSMVIPIGSFNADTYKTTVDIGAAYGGNAPSPGRYYLIDSQGAYLDLGELTSISTVIT 651 (785) T ss_pred EEeecccCCCCCcceeEEeeeeeEEEecCcceeccccccccccccccccCCccCCeEEEEeeCCcCccCceEcCCCcEEE Confidence 10 0000 000000000 00000000011123444444444332111000000000 Q ss_pred -h-hccccCCcccchhHhhhhhccccccceeeeecceEEEEEeeecce-eEec-ccceEEEcCccceEEEEEEeeccCCC Q lcl|Aclame:pro 623 -V-DWKSVDGIGVDAPAYLLTGYLAGGDYQREKFVPYITFHFKKTEDG-FVED-AEGDWTPTNQSSCMVQSQWSWTNSPA 698 (771) Q Consensus 623 -~-Dw~~~~~~gvd~~sy~~tgy~~~gd~~r~K~~pyl~~~~~~TEd~-~t~d-~~g~~~~~n~SScl~~~~w~~s~~~~ 698 (771) . ||.. +-+.-|+.+.-.++ -+.+++ +++++ -+.. .-|.. =+-++.+++-+++. T Consensus 652 ~~g~~~~---------~~v~vGl~y~~~~~------~~~~~~-~~~~~~~~~~~~~gr~-------~l~r~~~~~~~sg~ 708 (785) T protein:vir:94 652 LNGDWSG---------RTVFIGRSYLMSYK------FSRFLI-KIEDDSGTQSEDTGRL-------QLRRAWVNYRDTGA 708 (785) T ss_pred ecCCCCC---------ceEEEeeeeeEEEe------ecceeE-EecCCCcccccccccE-------EEEEEEEEeecccc Confidence 0 1211 01222332222111 111222 23332 1111 01111 12233344443320 Q ss_pred C----Ccccchheeeee--eehcccCCCCcCCCCcceeeeeccccceeeeEEEEEEEecCCCceEEEeEEEEEEeecCC Q lcl|Aclame:pro 699 S----NKWGRTWQAYRF--RRHFFPDNIDNQFDDGNSVVETKSRLRGSGKVLSLYITTEPKKNLHIYGWSMLVDVNGTV 771 (771) Q Consensus 699 ~----~kw~~~~q~Yr~--~r~~~p~~~~~~f~~~~~VV~TK~~~RG~G~~~~~~f~se~~KD~~llG~~~~~~~~g~~ 771 (771) - ....+. -+|.+ +|.--+.-..-+.-.| .+ +-.++|..+-.++++++..--.|+||+.+.+.+.+=.= T Consensus 709 ~~v~v~~~~~~-~~~~~~~~~~g~~~~~~~~~~tg--~~--~vp~~g~~~~~~v~i~~~~P~P~tvlsi~~eg~y~~r~ 782 (785) T protein:vir:94 709 LRLIVRNGERE-FVNTFNGYTLGQQTIGTTNIGDG--QY--RFAMNGNALTTSLTLESDYPTPVSIVGCGWEASYAKKA 782 (785) T ss_pred eEEEecCCCcc-ceeeecCcccCcccccccccccc--eE--EEEeecccceEEEEEEECCCCceEEEEEEEEEEEeccc Confidence 0 000111 12221 2210000000011122 22 23568899999999999999999999988777665443 No 22 >protein:vir:94583 Length: 792 # NCBI annotation: Tubular tail protein B # Family: family:all:825 # MgeID: mge:1516 # MgeName: Berlin # Cross-refs: genbank:acc:YP_919014;genbank:gi:119637778;genbank:GeneID:5179343 Probab=99.46 E-value=1.1e-11 Score=80.64 Aligned_cols=668 Identities=12% Similarity=0.091 Sum_probs=279.2 Q ss_pred CchhhhhhhhccccceeeeccchhcCCCCccccceeeeeccccchhhhhcceeecCCceeecceeeccCceeeeeechhh Q lcl|Aclame:pro 1 MAKTTNAAEFNTFVGGLITEASPLTFPQNASIDEVNFILNRDGSRNRRNGMDFENGATKVVCNTLVPADGTIAVTSHNWE 80 (771) Q Consensus 1 Ma~~~~~~e~ntFv~GliTEan~Lt~P~nas~De~N~~L~k~G~r~RR~Gl~~E~s~~~~l~~~~~~s~~~~~vt~~~W~ 80 (771) ||+-.+ -+..|.+| |-.--++.==++.-..-+||+...-|--+||-|+.+... |...-.+.....++ -++ T Consensus 1 M~~i~~--s~~n~~~G-iSqq~D~~ry~~q~~~~~N~~~~~~gG~~rRpG~~fv~~----l~~~~~~~~~~~l~---~~~ 70 (792) T protein:vir:94 1 MALISQ--SVKNLKGG-ISQQPNILRFPEQGSEQINGWSSETEGLQKRPPFVFTKT----IGDQNALGAKPLVH---LIN 70 (792) T ss_pred Ccceee--ecchhhcc-eecCcchHHhhhhhhhhhcceeeeccccccCChhHHHHh----hhcCCCCCcccEEE---EEE Confidence 997654 45789999 444444333345566789999998888899999765431 11111111111111 111 Q ss_pred hccCccceeEEEEEEccEEEEEecCCcee-eheeeEeeecceeCCCcceeeEEeeEEEEEEcCCcceEEEeccCCcee-- Q lcl|Aclame:pro 81 NAGGEVGRWISLVQVGTELKFFQTTGETL-SEGNFYNYQFVNMSPSHKLSYAVVDGLLVVANGSRDIYVFEYDSGSVS-- 157 (771) Q Consensus 81 ~~~g~v~~~~l~~q~g~~l~~~d~t~~~l-Sn~~l~~~~fv~~sP~~~is~~~v~G~lVva~~~~~~~i~~~~~~s~~-- 157 (771) - +....-+|+++.+. +++|+..+..+ -++. .-|. ....|.+.|+++.+...+.|+++.-++..+.-...+.. T Consensus 71 ~--~~~q~y~l~f~~~~-~rv~~~~g~~~~~~~~-~~y~-~~~~~~~~l~~~q~aD~~fi~n~~~~~~~~~~~~~~~~~~ 145 (792) T protein:vir:94 71 R--DSAEQYYVVFTGQG-VRVFDLNGKEYDVKGD-LSYV-KVENPRDDLRMVTVADYTFIVNRNMVVRPDTTPLYTLKEN 145 (792) T ss_pred e--CCCceEEEEEcCCe-EEEEecCCceEEeccc-Ccee-eecCCcceeEEEEEcCEEEEEeCCccceeEecCcCCCCCC Confidence 1 11233567777544 78887553322 1111 1121 12345556999999999999999887654433222111 Q ss_pred ------------eEEEEEEEEEeeeeccccccCcceeccccccCCCcc---Cchh---------heeeeeccccce---- Q lcl|Aclame:pro 158 ------------VTTKRLLVRDLFGVQDIVNGVDLRQGNDIATRPTVQ---TNAH---------IYNLRNQTFGVP---- 209 (771) Q Consensus 158 ------------~~t~~l~iRd~~~l~d~~~g~~~~~~~~~~~rpttl---S~eh---------~YnL~NqgW~~~---- 209 (771) -++.++.|... ..-.+-.....|... +.++ ..+...++|... T Consensus 146 ~~~~v~i~~g~y~~~y~i~i~~~----------~~~~~~~~~t~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~ 215 (792) T protein:vir:94 146 GDCLINIRGGMYGRTLAFTINNT----------KIAYEIAHGDAPEHSKQTDAQWLVKKLAGLARLNVAFKGWTFTEGPG 215 (792) T ss_pred ceEEEEccCCCcceeEEEEecCc----------eeeeeeecCcccceecccchhhhhhhhhhhccccccccccEEEECCe Confidence 11223333332 110000000111111 1111 123333444321 Q ss_pred --eeeeccCCCCcce-------------EEEccccccCCcCcchheeecc----ccccCCCcccccccch---------- Q lcl|Aclame:pro 210 --RVTWHSNEPSDPI-------------VTFRSAASGKFPSNSDSVNLAL----SKRADVEPSTTDRFRA---------- 260 (771) Q Consensus 210 --~~~~~s~s~~~~v-------------v~~~~~~~G~yPSnaD~~n~~~----~~~s~~e~~~~~~F~~---------- 260 (771) ++...++....++ +.-.-...+..|.++ ++.+. +..+..++--+-+|+. T Consensus 216 ~~~i~~~~~~~~~~~~~~~g~~~~~~~~~~~~v~~~~~lp~~~--~~G~~v~i~~~~~~~~d~y~v~~~~~~~~w~E~~~ 293 (792) T protein:vir:94 216 YIHVIAPSNSQINSLSTEDGYADQLMNAVMHTSQSFSRLPVEA--PNGYTVKIVGDTSKTSDMFYVQYDNMKKVWKEVAG 293 (792) T ss_pred EEEEEecCCceeeeeecccCcCcceeeeeeecccccccccccC--CCCcEEEEEccCCCCccceEEEEEcCCceEEEecc Confidence 1111111000000 000000011112211 00000 0000000000111110 Q ss_pred -hhhhcccccc-----ccCCCcceEEEeeecCcccceeeeecccccccccceeeecchhhccCCc-eeeeeecceeEEee Q lcl|Aclame:pro 261 -EDIVLNPIGT-----YETARGFFIIDAMARGKSRLEEIVKLKQRYPSLSFGVSSLPQDETPGGA-SVVCEYAGRVWYAG 333 (771) Q Consensus 261 -~~~~~n~~Gs-----~~aarG~yI~d~~~~~~s~~~~~~~~~~~~p~~~~~t~~~p~d~~~g~~-t~v~~~aGRv~y~g 333 (771) .......-.+ ...+.|.|.+.+..-.. ...+...+.|.---.|+| ++|+=|-+|++++| T Consensus 294 ~~~~~~~~~~tmp~~lv~~~~~~~~~~~~~w~~--------------r~~gd~~tnp~psf~g~~i~~v~f~q~RL~f~~ 359 (792) T protein:vir:94 294 WGVQKGLNGGTMPHALVRQADGSFQMQVLPWTQ--------------RTCGDMDTNPTPSIVDQKINDVFFFRNRLGFLA 359 (792) T ss_pred cceeeeecccccCeeEEEcCCCcEEEEeccccc--------------cccCccccCccceeccCCcceEEEEcceEEEec Confidence 0000000000 11122222222111000 000111111111123444 78999999999976 Q ss_pred ecceeecccccCCcccceeEEEeeecchhhccccccCCCCcCchhhhhhhcCCCEEeecCC--CceeEEEeecceeEEEe Q lcl|Aclame:pro 334 FSGQIIDGDDQSPRLVSYILFSQLVDSPADIVNCYQDGDPTSTEEPELVDTDGGFIRIEGA--HDIINLVNVGSAVMVVA 411 (771) Q Consensus 334 ~~~~~~~~~~~~p~~~~yv~fSqli~s~~~lg~CyQ~~DPts~~~~dl~dtDGG~I~I~ga--~~Iv~mv~~~ssLlVft 411 (771) |. +|++||.=| |.+=.|.+.. .+.|+|--.+.+-+. ..|.+|+++++.|++|| T Consensus 360 ------------~~---~v~~Srtgd--------~~nF~~~t~~--~~~DdD~I~~~~ss~~~~~i~~~v~~~~~L~l~T 414 (792) T protein:vir:94 360 ------------GE---NIVMSRTSK--------YFSLFPASVA--NLSDDDPIDVAVSHNRISILKYAVPFSEELLLWS 414 (792) T ss_pred ------------CC---eEEEEccCC--------cccCcccccc--CCCCCccEEEEecCCcceeeeEEeecCCcEEEEe Confidence 22 699988522 2333455422 466888777766553 46788999999999999 Q ss_pred cceEEEEEecccceeeecceeeeeeeeeeecCccceEEeCCeEEEEecCc----eEEec-ccc-cCcccccccCchhhhh Q lcl|Aclame:pro 412 ANGIWMIQGGSDYGFTATNYLVTKISEHGCSSPNSVVVVDNSFMYWGDDG----IYHLT-RNQ-YGDYVANNLTEKTIQK 485 (771) Q Consensus 412 ~nGVWal~G~S~~~fsAt~y~V~KISd~GcvspnSIV~id~aVvYwSDsG----I~~L~-~ne-~g~~ss~nLte~tIqt 485 (771) ..+-|.|.|+ ..++.++-.+.++|..+|.+.=.=+.+|++++|.+.+| |++.. .+. ..-+.+++||.. ++. T Consensus 415 ~~~q~~l~~~--~~lTP~~~~i~~~s~~~~~~~~~Pv~vG~~v~Fv~~~g~~~~v~r~~~~~~~~d~y~a~DlT~~-~~h 491 (792) T protein:vir:94 415 DQAQFVLSAQ--GILSPKSVELNLTTEFDVSDRARPFGVGRGVYFASPRASYTSLNRYYAVQDVSSVKSAEDMSAH-VPN 491 (792) T ss_pred cCcEEEEeCC--CcccceeEEEEEEEEeeccCCCCceEeCCeEEEeecCCCeeEEEeeeeeccccCceehhhHHHH-HHH Confidence 9999999873 37999999999999999988777788999999999998 55643 332 445667777765 433 Q ss_pred hhhhcChhHhccee-E-EEEeeccEEEEEecccccccccccceeEE---ecccccceeeeecceeccceeeeeee-eeeC Q lcl|Aclame:pro 486 YYEKIPSDAILNAT-G-FYDSYDKKVKWLYNTVLDGRTEPVTELVF---DLALGAFYPSKIGSLTAGRLPIPVGS-VKIP 559 (771) Q Consensus 486 ~~~sip~~~k~~~~-g-~yD~~~~~v~wly~e~~d~~~~y~tElVf---~L~~~afY~~ki~s~~ags~~~~i~s-~~vp 559 (771) |. +.... . .+=.-+..+.|.-. +.+..+.=+++. +..-.||.+|.+. |...+++-. ..== T Consensus 492 l~-------~~~v~~~~a~~~~~~~vv~~~~---~~g~l~~~ty~~~~~e~~v~aW~~~~~~----g~~~~~~~~~~~D~ 557 (792) T protein:vir:94 492 YI-------PNGVFSIRGSSTENFISVLSSN---APSRIFLYKFLYLNEEIAQQSWSHWELG----SNVTVLACDSIGST 557 (792) T ss_pred hc-------CCceEEEEEeCCCCcEEEEEEc---CCCeEEEEEEeecCCceEEEeEEEEEcC----CcEEEEEEeecCCE Confidence 33 22221 1 12122335556643 222211100110 1223499999763 222222110 0000 Q ss_pred CceeeecceEEeecccceeeccceeeeeeeeeeeeeeeeEEEEEEEcCCCceEEEeeecCCchhh-ccccCCcccchh-- Q lcl|Aclame:pro 560 PYKLVETGEEVTVASEQVTATGELVTVKVSTRSPVIRETKYIIVEKLSSPMRISFGGYTDEEFVD-WKSVDGIGVDAP-- 636 (771) Q Consensus 560 ~y~~~~t~~~V~v~~~~vv~~~~~v~~~~~~~~~~~r~~~y~~~~~~g~~~~~sF~~~~~d~F~D-w~~~~~~gvd~~-- 636 (771) .|-++.-.- +.++.-+....+...+-+..|-+-.|-+....+.=.+|+.+++.. +...+..|.++. T Consensus 558 l~~~v~r~~-----------~~~~~r~~~~~~~~d~~~~~~~~~lD~~~~~~~~~~~~~~~~~~T~~~~~~~~gl~~l~G 626 (792) T protein:vir:94 558 MYLVLRNQS-----------HTWMCRAHFTKNSIDFPDEPYRLYIDNKVKYVIPEGSYNDDTYATTVKPVDVYGMKYWTG 626 (792) T ss_pred EEEEEEeCC-----------CEEEEEEEEeecccccCCCcceeeeeeeeeEEecCcceecCceeeeeccccccCcccccC Confidence 011111000 000010000000000000000000000000000001122221110 000000111110 Q ss_pred -----------------Hhh--hhh--cccccccee---eeecceE------EEEEeeecceeEecccceEE-EcCccce Q lcl|Aclame:pro 637 -----------------AYL--LTG--YLAGGDYQR---EKFVPYI------TFHFKKTEDGFVEDAEGDWT-PTNQSSC 685 (771) Q Consensus 637 -----------------sy~--~tg--y~~~gd~~r---~K~~pyl------~~~~~~TEd~~t~d~~g~~~-~~n~SSc 685 (771) .-. .++ .+..||... ..-.||. ..++++ +.+ ++... ...-.-. T Consensus 627 ~~v~v~~dG~~~~~~~~~~~~~~~~~~i~~~g~~~a~~v~VGl~y~~~~~~~~~~~~~-~~g-----~~~~~~~~~gr~r 700 (792) T protein:vir:94 627 KFYIVASDGLVSWFEPPRGGWPNGVPMLTMSGNREGETIYVGLAISFRYVFSKFLIKK-TAD-----DGSIATEDIGRLQ 700 (792) T ss_pred cEEEEEecCceeEeecccceecCCccEEEecCCccCCeEEEeeeeeEEEEeccceeec-cCC-----CcCccccceeeEE Confidence 000 000 011112111 0111221 111211 111 11110 0111112 Q ss_pred EEEEEEeeccCCCCCcc----cchheeeeee--ehcccCCCCcCCCCcceeeeeccccceeeeEEEEEEEecCCCceEEE Q lcl|Aclame:pro 686 MVQSQWSWTNSPASNKW----GRTWQAYRFR--RHFFPDNIDNQFDDGNSVVETKSRLRGSGKVLSLYITTEPKKNLHIY 759 (771) Q Consensus 686 l~~~~w~~s~~~~~~kw----~~~~q~Yr~~--r~~~p~~~~~~f~~~~~VV~TK~~~RG~G~~~~~~f~se~~KD~~ll 759 (771) +-++.+++.+++. .++ +.+...|.+- |...|+.......-...++ +..++|..+-.+++++++.--.|+|| T Consensus 701 l~r~~~~~~~tg~-~~v~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~tg~~--~vp~~g~~~~~~v~i~~d~P~P~tvl 777 (792) T protein:vir:94 701 LRRAWVNYEDSGA-FTVEVENTSRLFSYDMAGARLGSNVLRAGGLNVGTGQF--RFPVTGNAQLNEVRIISEHTTPLNVI 777 (792) T ss_pred EEEEEEeeeccce-eEEEEcCCCcceeeeeccceeccccccccccccccceE--EEEeeccCceEEEEEEECCCCCEEEE Confidence 3355555555421 111 1111122221 2112222222211111112 24568999999999999999999999 Q ss_pred eEEEEEEeecCC Q lcl|Aclame:pro 760 GWSMLVDVNGTV 771 (771) Q Consensus 760 G~~~~~~~~g~~ 771 (771) +-+.+.+.+=+= T Consensus 778 ai~~eg~y~~r~ 789 (792) T protein:vir:94 778 GCGWEGNYLRRS 789 (792) T ss_pred EEEEEEEEeccc Confidence 988776655433 No 23 >protein:vir:95324 Length: 823 # NCBI annotation: hypothetical protein # Family: family:all:780 # MgeID: mge:1564 # MgeName: phiV10 # Cross-refs: genbank:acc:YP_512269;genbank:gi:89152436;genbank:GeneID:3952993 Probab=99.42 E-value=2.3e-11 Score=78.92 Aligned_cols=683 Identities=15% Similarity=0.162 Sum_probs=277.4 Q ss_pred Cchhhhhhhhccccce-----eeeccchhcCCCCccccceeeeeccccchhhhhcceeecCCceeecceeeccCceeeee Q lcl|Aclame:pro 1 MAKTTNAAEFNTFVGG-----LITEASPLTFPQNASIDEVNFILNRDGSRNRRNGMDFENGATKVVCNTLVPADGTIAVT 75 (771) Q Consensus 1 Ma~~~~~~e~ntFv~G-----liTEan~Lt~P~nas~De~N~~L~k~G~r~RR~Gl~~E~s~~~~l~~~~~~s~~~~~vt 75 (771) |+++.-+. .|-.| |--=.-.+-|| +.-..-+||.....|--+||-|+.+-... ..+.+..-+|. T Consensus 1 m~i~~~q~---sF~~GElsP~l~gR~Dl~ry~-~q~~~~~N~~~~~~GGl~rRpGt~fva~~-------~~~~g~~rLip 69 (823) T protein:vir:95 1 MAISWIQP---SFAGGEIGPSLYGRIDMAKYQ-VALRKCDNFIVRQYGGVENRPGTRFVGAA-------KYPNRKCRLIP 69 (823) T ss_pred Ccceeech---hccCceechheeccchHHHHH-HHHhhhhCcEeeecCCceecCchhhhhhh-------cCCCCCeeEEE Confidence 99888774 66677 33333333444 34456789999999999999998765311 11111111221 Q ss_pred echhhhccCccceeEEEEEEccEEEEEecCCceeeheeeEeeecceeCCC---c--ceeeEEeeEEEEEEcCCcceEEEe Q lcl|Aclame:pro 76 SHNWENAGGEVGRWISLVQVGTELKFFQTTGETLSEGNFYNYQFVNMSPS---H--KLSYAVVDGLLVVANGSRDIYVFE 150 (771) Q Consensus 76 ~~~W~~~~g~v~~~~l~~q~g~~l~~~d~t~~~lSn~~l~~~~fv~~sP~---~--~is~~~v~G~lVva~~~~~~~i~~ 150 (771) ++ -....-.+|.+- +.-++||++- ..|.+.--.-++ ..+|= + .|+++.+...+.|+++.-+++-+. T Consensus 70 ---f~--~s~~q~y~Lefg-~~~irV~~~~-g~vv~~~~~~~e--v~tPy~~~~l~~Lr~~qsaD~~fivh~~~~p~~L~ 140 (823) T protein:vir:95 70 ---FQ--FSTVQTYALEFG-HQYMRVIKDG-ALVLNSSNVIYE--IATPYTEADLFRIKFTQSADVLTLVHPAYPPKELR 140 (823) T ss_pred ---EE--eCCCcEEEEEEc-CCeEEEEeCC-cEEEecCCceeE--EecccccccccceeEEEeccEEEEEcCCccceEEE Confidence 01 111233566665 5556888654 344211111122 33441 1 599999999999999999876554 Q ss_pred ccCCceeeEEEEEEEEEe-eeeccccccCcceeccccccCCCc------cCchhh----eeeeeccccceeeeeccCCCC Q lcl|Aclame:pro 151 YDSGSVSVTTKRLLVRDL-FGVQDIVNGVDLRQGNDIATRPTV------QTNAHI----YNLRNQTFGVPRVTWHSNEPS 219 (771) Q Consensus 151 ~~~~s~~~~t~~l~iRd~-~~l~d~~~g~~~~~~~~~~~rptt------lS~eh~----YnL~NqgW~~~~~~~~s~s~~ 219 (771) -.++. +-..-.+.++.- ++-..+.-.+.. ..+.-....+. ...+|. |-.....++++.-..... T Consensus 141 r~~~~-~w~l~~~~~~~gp~~~~~~~~t~~v-~~~~~~~~~t~ta~~~~~~~d~vg~~~~l~~~~~~~~~~~~~~~~--- 215 (823) T protein:vir:95 141 RYAHD-NWQLVDVVTKNGPFEDINIDESLTV-YASASTGTITLTASASIFGAEQVGKLFYLEQPAVDSVPVWETSKS--- 215 (823) T ss_pred ecCCC-CceEEEEEEeccccccccccceeEE-eccccCceeEEeecccccchhhccceEEEeccccceeeecceeee--- Confidence 33332 111112223321 110000000000 00000000000 111121 111111122211100000 Q ss_pred cceEEEccccccCCcCcchheeecc-cccc-CCCcccccccchhhhhccccccccCCCcceEEEeeecCcccc------- Q lcl|Aclame:pro 220 DPIVTFRSAASGKFPSNSDSVNLAL-SKRA-DVEPSTTDRFRAEDIVLNPIGTYETARGFFIIDAMARGKSRL------- 290 (771) Q Consensus 220 ~~vv~~~~~~~G~yPSnaD~~n~~~-~~~s-~~e~~~~~~F~~~~~~~n~~Gs~~aarG~yI~d~~~~~~s~~------- 290 (771) ..+|..++....+.... ...+ ...++.. +.....-..|+..-.. ++-..+.++..++ T Consensus 216 --------~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~----~~~~~~~~~~~~~~~~--~~~~~~~~~~~g~~~~t~v~ 281 (823) T protein:vir:95 216 --------TSIGDIRRADSNYYRAVTAGKTGTLRPSHT----EGTSWDGWGGSGDDDT--GIEWEYLHSGFGIARITAVN 281 (823) T ss_pred --------ecccceEEecccceeeeeccccceeecccC----CcceEEeceecccccc--eeEEEEEeCCcceEEEEeec Confidence 00111111111000000 0000 0000000 0000000000000000 0000011110000 Q ss_pred ----eeeeecc-----cccccccceeeecchhhccCCceeeeeecceeEEeeecceeecccccCCcccceeEEEeeecch Q lcl|Aclame:pro 291 ----EEIVKLK-----QRYPSLSFGVSSLPQDETPGGASVVCEYAGRVWYAGFSGQIIDGDDQSPRLVSYILFSQLVDSP 361 (771) Q Consensus 291 ----~~~~~~~-----~~~p~~~~~t~~~p~d~~~g~~t~v~~~aGRv~y~g~~~~~~~~~~~~p~~~~yv~fSqli~s~ 361 (771) ......+ .+-....+...-.|-..+.|+|++|+=|-+|++++|..+. |. +|++||.=| T Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~~g~Ps~v~f~q~RL~f~g~~~~--------p~---~v~~Srtgd-- 348 (823) T protein:vir:95 282 GTTATAEVISYIPSQVVGEDNASYKWAKYAWNSVNGYPGTVVYYQQRLYFAASTAF--------PQ---TIWASRTGD-- 348 (823) T ss_pred ceeeeceEeeeeccccccCCcCCccccccccCcCCCCccEEEEEeceEEEEEcCCC--------Cc---EEEEeccCC-- Confidence 0000000 0000001111112344567899999999999999884332 33 688987532 Q ss_pred hhccccccCCCCcCchhhhhhhcCCCEEeecCC--CceeEEEeecceeEEEecceEEEEEecccceeeecceeeeeeeee Q lcl|Aclame:pro 362 ADIVNCYQDGDPTSTEEPELVDTDGGFIRIEGA--HDIINLVNVGSAVMVVAANGIWMIQGGSDYGFTATNYLVTKISEH 439 (771) Q Consensus 362 ~~lg~CyQ~~DPts~~~~dl~dtDGG~I~I~ga--~~Iv~mv~~~ssLlVft~nGVWal~G~S~~~fsAt~y~V~KISd~ 439 (771) |.+=.|.++ +.|+|--.+.+-+. ..|.+|++++ .|+||+++|.|+|.|+++..+++++-.+.++|.. T Consensus 349 ------~~nF~~~~~----~~DdD~I~~~~s~~~~~~i~~~v~~~-~Lli~t~~~e~~l~~~~~~~lTP~~~~~~~~s~~ 417 (823) T protein:vir:95 349 ------YKDFGKSNP----TQDDDRIIYTYAGRQVNEIRHLIDVG-SLVALTSGGEYVITGDQNKVLTPSSFAFSSQGSN 417 (823) T ss_pred ------ccccccccC----CCCCCcEEEEEcCCcceEEEEEeecC-cEEEEecCcEEEEEcCCCcccceeeEEEEEeecc Confidence 334444442 33778766666554 4589999996 6999999999999998888999999999999999 Q ss_pred eecCccceEEeCCeEEEEecCc--eEEeccc-ccCcccccccCchhhhhhhhh----------cCh--------hHhcce Q lcl|Aclame:pro 440 GCSSPNSVVVVDNSFMYWGDDG--IYHLTRN-QYGDYVANNLTEKTIQKYYEK----------IPS--------DAILNA 498 (771) Q Consensus 440 GcvspnSIV~id~aVvYwSDsG--I~~L~~n-e~g~~ss~nLte~tIqt~~~s----------ip~--------~~k~~~ 498 (771) ||.+ =.=+.+|++++|.+..| |+.+..+ +..-+.+++||.. +..+++. -|. +.+..+ T Consensus 418 g~~~-~~Pv~vg~~~~Fv~~~g~~vre~~~~~~~d~~~~~dlT~~-a~hl~~~~~i~~~a~~~~p~~~~~~v~~dG~l~~ 495 (823) T protein:vir:95 418 GSSN-VPPIAVANIALFVQEKGSVVRDLAYSFDVDGYQGNDLTIL-ANHLFQKHSIVDWCFSIVPYSSAFCIRDDGKLLV 495 (823) T ss_pred cccc-ccceEeCCeEEEEecCCCEEEEEEEeeecCceecchhhhh-hhhhcCCCceEEEEEecCCCeEEEEEecCCcEEE Confidence 9954 46678999999999998 8888888 3566777777743 2222221 111 111111 Q ss_pred eEEEEeeccEEEEEeccccccccccc--------ce--eEEec---ccccceeeeeccee----ccceeeeeeee----- Q lcl|Aclame:pro 499 TGFYDSYDKKVKWLYNTVLDGRTEPV--------TE--LVFDL---ALGAFYPSKIGSLT----AGRLPIPVGSV----- 556 (771) Q Consensus 499 ~g~yD~~~~~v~wly~e~~d~~~~y~--------tE--lVf~L---~~~afY~~ki~s~~----ags~~~~i~s~----- 556 (771) .+|++.++..-|--- ..+++.... ++ +|..- .-.-+|..|+.+.. ....-.+|+.. T Consensus 496 -~ty~~~q~v~aW~~~-~~~g~~~~~~~i~~~~~d~l~~~v~R~i~g~~~~yiE~~~~~~~~~~~~~~~lD~~~s~~g~~ 573 (823) T protein:vir:95 496 -MTYLRDQQVFAWAPQ-SSTGKYESTCSISEGNEDAVYFVVNRTVNGQTVRYIERLSSRLFTSDEDAFFVDSGLSYDGRN 573 (823) T ss_pred -EEEecccceeeeEEE-ecCCcEEEEEEecCCCCCEEEEEEEeccCCeEEEEEEeeccccCCCccceeEEEEEEEeecCc Confidence 244443333222211 011111110 11 00000 01112333332100 00000011100 Q ss_pred ------eeCC---ceeeecceEEeec-----ccceeec-------cceeeeeeeeeeeeeee-----eEEEEEEEcCCCc Q lcl|Aclame:pro 557 ------KIPP---YKLVETGEEVTVA-----SEQVTAT-------GELVTVKVSTRSPVIRE-----TKYIIVEKLSSPM 610 (771) Q Consensus 557 ------~vp~---y~~~~t~~~V~v~-----~~~vv~~-------~~~v~~~~~~~~~~~r~-----~~y~~~~~~g~~~ 610 (771) .+++ .-...+...|.+. ..+++.. ...+.+|.+......+. ..+.......... T Consensus 574 ~~~~~~~l~~g~~~l~~l~g~~v~~adg~~~~~~~v~g~i~l~~~~~~~~vGl~~~~~i~~~~~~v~~~~a~~~~~~r~v 653 (823) T protein:vir:95 574 TSDRTMTITGGSGEWDYLAEYTISVSGGAYFTSSDVGAQLQFPYTGADPDTGYEVSKELRCDIISVTSNTAVVVRANRNV 653 (823) T ss_pred ccceeeEecCCCCcccccCceEEEecCcceECCccceeEEEeCcCCCccccccceEEEEEEeeceeeCCceEEEccCCcc Confidence 0000 0000011111110 0011110 01122222222111100 0011111111111 Q ss_pred eEEEeeecCCchhhcccc-CC-cccchhH---hhhh--h------ccccccceee-------eecceEEEE---Ee-eec Q lcl|Aclame:pro 611 RISFGGYTDEEFVDWKSV-DG-IGVDAPA---YLLT--G------YLAGGDYQRE-------KFVPYITFH---FK-KTE 666 (771) Q Consensus 611 ~~sF~~~~~d~F~Dw~~~-~~-~gvd~~s---y~~t--g------y~~~gd~~r~-------K~~pyl~~~---~~-~TE 666 (771) ...|-.+.-. +|+.. +. .|.||-+ ...- | .-..|.+.=. .-+||.+.. -. -.. T Consensus 654 ~a~l~~~~t~---~~~~~~~~~~gL~hleg~tv~v~~dg~~~~~~~v~~G~vtl~~~~~~v~vGl~~~~~~~~l~~~~~~ 730 (823) T protein:vir:95 654 PPSLRNVATT---NWQMARRTFGGLSHLEGQTVNILSDANVEPQKVVSGGAVTLESPGAVVHIGLPITAEFETLDINING 730 (823) T ss_pred cceeeeeecc---ccccccceeeeccccccceEEEEEcCeeeCCeEecCCEEEecCCCCEEEEeecceeeEEecchhcCC Confidence 1111111100 11100 00 1111110 0000 0 0001111111 111222111 00 001 Q ss_pred ceeEecccceEEEcCccceEEEEEEeeccCCCCCcccc---hheeeeeeehcccCCCCcC--CCCcceeeeecccc-cee Q lcl|Aclame:pro 667 DGFVEDAEGDWTPTNQSSCMVQSQWSWTNSPASNKWGR---TWQAYRFRRHFFPDNIDNQ--FDDGNSVVETKSRL-RGS 740 (771) Q Consensus 667 d~~t~d~~g~~~~~n~SScl~~~~w~~s~~~~~~kw~~---~~q~Yr~~r~~~p~~~~~~--f~~~~~VV~TK~~~-RG~ 740 (771) +|. .-|...+.+ .|-+++-=.. +.|-+. +.+-++||+ ++....+ .-.|+ + +.++ -|. T Consensus 731 ~g~---~~g~~~ri~--~~~~~~~~s~-----~~~~g~~~~~l~~~~~r~---~~~~~~~~~~~tG~--~--~~~~~~~~ 793 (823) T protein:vir:95 731 QET---LLDKKQVIP--SVTLVVNASR-----GIWATTPGGKWYEYPQRE---FEFYDDPVDDATGK--V--EVKLDSNW 793 (823) T ss_pred Ccc---cCCceeEEe--EEEEEEEeee-----eEEEecCCCceeEeeccC---CCcccCCCCcccce--E--EEecCCCc Confidence 221 223333333 3444443221 222211 112334544 2323222 22333 2 1233 567 Q ss_pred eeEEEEEEEecCCCceEEEeEEEEEEeecC Q lcl|Aclame:pro 741 GKVLSLYITTEPKKNLHIYGWSMLVDVNGT 770 (771) Q Consensus 741 G~~~~~~f~se~~KD~~llG~~~~~~~~g~ 770 (771) .+--+++++-+...-|+||+-.+.|.|.|- T Consensus 794 ~~~~~~~i~q~~plp~tvl~v~~~~~~~g~ 823 (823) T protein:vir:95 794 GKNGRVKIRQLDPLPLSVLAVIPRLTVGGF 823 (823) T ss_pred CCccEEEEEEcCCCceEEEEEEEEEEecCC Confidence 788889999999999999999999999999 No 24 >protein:vir:3366 Length: 801 # NCBI annotation: tail tubular protein B # Family: family:all:825 # MgeID: mge:67 # MgeName: T3 # Cross-refs: genbank:acc:NP_523337;swissprot:trembl:q8w5u3;genbank:gi:17570828;goa:Q8W5U3;uniprot:Q8W5U3;genbank:GeneID:927453 Probab=99.37 E-value=5.3e-11 Score=76.92 Aligned_cols=683 Identities=12% Similarity=0.099 Sum_probs=274.4 Q ss_pred CchhhhhhhhccccceeeeccchhcCCCCccccceeeeeccccchhhhhcceeecCCceeecceeeccCceeeeeechhh Q lcl|Aclame:pro 1 MAKTTNAAEFNTFVGGLITEASPLTFPQNASIDEVNFILNRDGSRNRRNGMDFENGATKVVCNTLVPADGTIAVTSHNWE 80 (771) Q Consensus 1 Ma~~~~~~e~ntFv~GliTEan~Lt~P~nas~De~N~~L~k~G~r~RR~Gl~~E~s~~~~l~~~~~~s~~~~~vt~~~W~ 80 (771) ||+-. -.+..|.+|+=--.-++-|| +.-..-+||+..--|--+||-|+.+.- . +..+...-+ .+=|. T Consensus 1 M~~i~--~~~~nl~~GvSqq~d~~r~~-~q~~~~~N~~~~~~gG~~rRpGt~~va--~------~~~~~~~~~--~~~~~ 67 (801) T protein:vir:33 1 MALIS--QSIKNLKGGISQQPDILRFT-EQGSVQINGWSSESEGIQKRPPMIHLK--T------LGTAGYVGA--QPYVH 67 (801) T ss_pred CceeE--eeccceecceeccchhHhhh-hhHhhhhcceeecccCcccCchhHhhh--h------hcCCCcccc--ceEEE Confidence 99654 56789999944444455555 455678999999888889999986653 1 111111000 00111 Q ss_pred --hccCccceeEEEEEEccEEEEEecCCceeeheeeEeeecceeCCCcceeeEEeeEEEEEEcCCcceEEEeccCCceee Q lcl|Aclame:pro 81 --NAGGEVGRWISLVQVGTELKFFQTTGETLSEGNFYNYQFVNMSPSHKLSYAVVDGLLVVANGSRDIYVFEYDSGSVSV 158 (771) Q Consensus 81 --~~~g~v~~~~l~~q~g~~l~~~d~t~~~lSn~~l~~~~fv~~sP~~~is~~~v~G~lVva~~~~~~~i~~~~~~s~~~ 158 (771) +. +....-+|++. +..+++|+..+.-+.-..-.-| .....|...|+++.+.....|+++.-++.-.......... T Consensus 68 ~~~r-~~~~~y~l~~~-~~~irv~~~~G~~~~v~~~~~y-~~~~~~~~~l~~~t~aD~~fi~nr~~~p~~~~~~~~~~~~ 144 (801) T protein:vir:33 68 LINR-DEFEQYFVVFT-GEDIKVFDLDGKEYQVRGDRSY-VRTANPREDLRMVTVADYTFVTNRKVVVQSNDQSVNLPGF 144 (801) T ss_pred EEEe-CCceEEEEEEc-CCeEEEEccCCcEEEEecCCcc-eeecCcchheEEEEEcCEEEEeeCCeeecccCCccccccc Confidence 11 22222344444 6779999876543311111111 1123344459999999999999877654211100000000 Q ss_pred ---EEEEEEEEEe-----eeeccccccCccee----ccccccCCCccCch-hheeeeeccccceeeeeccCC-------- Q lcl|Aclame:pro 159 ---TTKRLLVRDL-----FGVQDIVNGVDLRQ----GNDIATRPTVQTNA-HIYNLRNQTFGVPRVTWHSNE-------- 217 (771) Q Consensus 159 ---~t~~l~iRd~-----~~l~d~~~g~~~~~----~~~~~~rpttlS~e-h~YnL~NqgW~~~~~~~~s~s-------- 217 (771) ..--+.+|.- +-+. ++|+.... .......+..++-+ -.-.|+++.++.+........ T Consensus 145 ~~~~~~li~v~~~~yg~t~~I~--i~gs~~~~~~~~~gs~~~~v~~~s~~~~A~~l~~~~~~~~~~~~~~~~~~~w~~~~ 222 (801) T protein:vir:33 145 KDQGDALINVRGGQYGRRLSIE--FNGAERAAVQLPDGSQPAHVNEVDGQAIAEKLAAQLRNNLGNPNNDQDPNKWRFNV 222 (801) T ss_pred CCCcceEEEEeecccceEEEEE--ECCcceEEEEeeccccccccccccchhhhhhhhhhhhccCccceeeecCceEEEEe Confidence 0011122200 0111 11211100 00001111111000 011122222221111000000 Q ss_pred CCcceEEEccccccCCcCc-chhe-----eeccccccCCCcccccccchhhhhcccccc---------ccCCCcceEEEe Q lcl|Aclame:pro 218 PSDPIVTFRSAASGKFPSN-SDSV-----NLALSKRADVEPSTTDRFRAEDIVLNPIGT---------YETARGFFIIDA 282 (771) Q Consensus 218 ~~~~vv~~~~~~~G~yPSn-aD~~-----n~~~~~~s~~e~~~~~~F~~~~~~~n~~Gs---------~~aarG~yI~d~ 282 (771) .+..+..-.+.....++.. .|.. +...........--..-++=..+.--+.+. +..++|.+.=.+ T Consensus 223 ~~g~~~i~~p~~~~~~~itt~~g~~~~~~~~~~~~v~~~~~lp~~~~~g~~v~v~~~~~~~~~~y~v~~~~~~~~w~e~~ 302 (801) T protein:vir:33 223 GPGFIHILAPNNDNVWGLQTKDGYADQLINPVTHYTQSFQKLPINAPDGYIVKIVGDTSKTADQYYVRFDLNRKVWVETI 302 (801) T ss_pred cCeEEEEecCCCcccccccccCCccceeEEEEeecccceeeeeeecCCCcEEEEEecCCCcccceEEEEEcCCcEEEEee Confidence 0111100011100001100 0000 000000000000000000000000000000 011111111000 Q ss_pred eecCcccceeeee----------cccc--cccccceeee------cchhh-ccCCceeeeeecceeEEeeecceeecccc Q lcl|Aclame:pro 283 MARGKSRLEEIVK----------LKQR--YPSLSFGVSS------LPQDE-TPGGASVVCEYAGRVWYAGFSGQIIDGDD 343 (771) Q Consensus 283 ~~~~~s~~~~~~~----------~~~~--~p~~~~~t~~------~p~d~-~~g~~t~v~~~aGRv~y~g~~~~~~~~~~ 343 (771) ..+. ...+.. ...+ ++..+..-.. .|..- .-++|++|+=|-+|++++| T Consensus 303 -~~g~--~~~~~~~tmp~~l~~~~~~tf~~~~~~w~~r~~gd~~tnp~psf~g~~~~~v~f~q~RL~f~~---------- 369 (801) T protein:vir:33 303 -GWNT--RTHLHYHTMPWALVRASDGNFDFKYLEWGARTVGDDTTNPYPSFTGQTINDIFFFRNRLGFLS---------- 369 (801) T ss_pred -cccc--ceeeeecccceEEEEccCceEEecccCccccccCCccccCcccccCCCceEEEEEcceEEEee---------- Confidence 0000 000000 0000 0111111100 11111 1245799999999999976 Q ss_pred cCCcccceeEEEeeecchhhccccccCCCCcCchhhhhhhcCCCEEeecC--CCceeEEEeecceeEEEecceEEEEEec Q lcl|Aclame:pro 344 QSPRLVSYILFSQLVDSPADIVNCYQDGDPTSTEEPELVDTDGGFIRIEG--AHDIINLVNVGSAVMVVAANGIWMIQGG 421 (771) Q Consensus 344 ~~p~~~~yv~fSqli~s~~~lg~CyQ~~DPts~~~~dl~dtDGG~I~I~g--a~~Iv~mv~~~ssLlVft~nGVWal~G~ 421 (771) |. +|++||.=| |.+=.|.+.. .+.|+|--.+.+-+ ...|.+|+++++.|++||..+-|.|.|+ T Consensus 370 --~~---~v~~Srtgd--------~~nF~~~t~~--~~~DdD~i~~~~~~~~~~~i~~~v~~~~~L~l~t~~~q~~l~~~ 434 (801) T protein:vir:33 370 --GE---NIILSRTSK--------YFNFFPASVS--NYSDDDPIDVAVSHDRVSTLKYAVPFSEELLLWSDQAQFVLTAS 434 (801) T ss_pred --CC---eEEEEecCC--------cccccccccc--CCCCCccEEEEecCCcceeeeEEeecCCcEEEEecCcEEEEeCC Confidence 22 699988522 2233344433 46677776666554 4568889999999999999999999873 Q ss_pred ccceeeecceeeeeeeeeeecCccceEEeCCeEEEEecCc----eEEecc-c-ccCcccccccCchhhhhhhhhcChhHh Q lcl|Aclame:pro 422 SDYGFTATNYLVTKISEHGCSSPNSVVVVDNSFMYWGDDG----IYHLTR-N-QYGDYVANNLTEKTIQKYYEKIPSDAI 495 (771) Q Consensus 422 S~~~fsAt~y~V~KISd~GcvspnSIV~id~aVvYwSDsG----I~~L~~-n-e~g~~ss~nLte~tIqt~~~sip~~~k 495 (771) + .++.++..+.++|..+|.+-=.=+.+|++++|.+.+| |++... + +..-+.+++||.. ++.|. + T Consensus 435 -~-~lTP~~~~~~~~s~~~~~~~~~Pv~vg~~v~f~~~~g~~~~v~r~~~~~~~~d~y~~~Dlt~~-~~~~~-------~ 504 (801) T protein:vir:33 435 -D-ILSSRSVGLNLTTQFDVQDRARPHGVGRNVYFSSPRASFTSINRYYAVQDVSSVKNAEDMTAH-VPNYI-------P 504 (801) T ss_pred -C-cccceeEEEEEEEeecccCCCCceEecCeEEEEecCCCeeEEEEEEeecccccceehhhHHHH-HHHhc-------C Confidence 3 7999999999999999988777789999999999998 555433 3 2455567777764 43333 2 Q ss_pred ccee-EEEEeeccEEEEEecccccccccccceeEE---ecccccceeeeecceeccceeeeeeeeeeCCceeeecceEEe Q lcl|Aclame:pro 496 LNAT-GFYDSYDKKVKWLYNTVLDGRTEPVTELVF---DLALGAFYPSKIGSLTAGRLPIPVGSVKIPPYKLVETGEEVT 571 (771) Q Consensus 496 ~~~~-g~yD~~~~~v~wly~e~~d~~~~y~tElVf---~L~~~afY~~ki~s~~ags~~~~i~s~~vp~y~~~~t~~~V~ 571 (771) .... .-+ ..+...|++-..-+.+..+.=+++. ...-.||.+|.+.. ...+++.. . ..+.--+- T Consensus 505 ~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~~y~~~~~e~~v~aW~~~~~~g----~~~~~~~~--~-----~~d~l~~v 571 (801) T protein:vir:33 505 NGVFSISG--TTAENFVAILTSGAPNRVYIYKFLYIDEEIRQQSWSHWDFGD----NVTVFAAQ--V-----INSTMTVL 571 (801) T ss_pred CceEEEEE--cCCCCeEEEEEecCCCEEEEEEEecCCCceEEEeeEEEEcCC----CEEEEEEe--c-----CCCEEEEE Confidence 2222 122 2334445543333333221111121 22234999997733 32222210 0 00000000 Q ss_pred ecccceeeccceeeeeeeeeeeeeee---eEEEEEEEcCCCceEEEeeecCCchh-hccccCCcccchhH---------- Q lcl|Aclame:pro 572 VASEQVTATGELVTVKVSTRSPVIRE---TKYIIVEKLSSPMRISFGGYTDEEFV-DWKSVDGIGVDAPA---------- 637 (771) Q Consensus 572 v~~~~vv~~~~~v~~~~~~~~~~~r~---~~y~~~~~~g~~~~~sF~~~~~d~F~-Dw~~~~~~gvd~~s---------- 637 (771) |.-. ..+.+.+-.......+ ..|.+-.|-.......=.+|+.+.+. -|.....-|.+|.. T Consensus 572 v~r~------~~~~le~~~~~~~~~d~~~~~~~~~lD~~~~~~~~~~~~~~~~~~t~~~~~~~~gl~~~eg~~v~~~~dG 645 (801) T protein:vir:33 572 MSNE------HAVWMGRLHFTKDSIDLPGEPYRLYIDAKRKYTIPAGTYNDDTYQTSISLSTIYGMNFTKGRVSVVFPDG 645 (801) T ss_pred EEcC------CcEEEEEEEEeeccccCCCccceEEeecceEEEecccceecCccccccccccccCCccccceEEEEEeCC Confidence 0000 0011111000000000 01111010000000001123333221 11110001122110 Q ss_pred ------hhhhhc------cccccceee---eecceE------EEEEeeecceeEecccceEEEcCccceE---EEEEEee Q lcl|Aclame:pro 638 ------YLLTGY------LAGGDYQRE---KFVPYI------TFHFKKTEDGFVEDAEGDWTPTNQSSCM---VQSQWSW 693 (771) Q Consensus 638 ------y~~tgy------~~~gd~~r~---K~~pyl------~~~~~~TEd~~t~d~~g~~~~~n~SScl---~~~~w~~ 693 (771) +...+. +..||.... .-.||. ..+++.. +++|..... ..|. -++.+++ T Consensus 646 ~v~~~~~~~~~~~~~~~l~i~~~~~~~~v~vGl~y~s~~~~~~~~~~~~------~~~~~~~~~--~~~r~~l~r~~~~~ 717 (801) T protein:vir:33 646 KIVEIDQPINGWSSDPMLRLDGNQEGQVVYIGFNIPFTYTFSKFLIKKT------AEDGSTATE--DIGRLQLRRAWVNY 717 (801) T ss_pred ceEeeeeccccccCceeEEecCCCCCCEEEEeeeeeEEEEeCceEEecc------CCCCceeee--eeccEEEEEEEEEe Confidence 000000 000111000 011111 1112111 111211111 1122 2334444 Q ss_pred ccCCCCCcc--cchhe--eeeeee--hcccCCCCc--CCCCcceeeeeccccceeeeEEEEEEEecCCCceEEEeEEEEE Q lcl|Aclame:pro 694 TNSPASNKW--GRTWQ--AYRFRR--HFFPDNIDN--QFDDGNSVVETKSRLRGSGKVLSLYITTEPKKNLHIYGWSMLV 765 (771) Q Consensus 694 s~~~~~~kw--~~~~q--~Yr~~r--~~~p~~~~~--~f~~~~~VV~TK~~~RG~G~~~~~~f~se~~KD~~llG~~~~~ 765 (771) .+++. .++ +++.+ .|.+.- ...|+.... ....|. + +-.+||..+-.+|+++++.--.|+||+.+.+. T Consensus 718 ~~tg~-~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tg~--~--~vp~~g~~~~~~v~i~~d~P~P~tvl~i~~eg 792 (801) T protein:vir:33 718 EDSGA-FIIRVNNLSREFIYTMAGARLGSDNLRVGGSNIGTGQ--Y--RFPVVGNAQTNTVTIESDASTPLNIIGCGWEG 792 (801) T ss_pred ecCcc-eEEEECCcccceeeeecccccccccccccccccccce--E--EEEeeccCceEEEEEEeCCCCCEEEEEEEEEE Confidence 44432 111 11111 232111 111211111 112332 2 23568999999999999999999999988777 Q ss_pred EeecCC Q lcl|Aclame:pro 766 DVNGTV 771 (771) Q Consensus 766 ~~~g~~ 771 (771) +.+=.= T Consensus 793 ~y~~r~ 798 (801) T protein:vir:33 793 NYLRRS 798 (801) T ss_pred EEeccc Confidence 665443 No 25 >protein:vir:78957 Length: 826 # NCBI annotation: putative tail tubular protein B # Family: family:all:825 # MgeID: mge:1860 # MgeName: LKD16 # Cross-refs: genbank:acc:YP_001522826;genbank:gi:158345061;genbank:GeneID:5687447 Probab=99.36 E-value=6.3e-11 Score=76.50 Aligned_cols=664 Identities=13% Similarity=0.091 Sum_probs=267.9 Q ss_pred CchhhhhhhhccccceeeeccchhcCCCCccccceeeeeccccchhhhhcceeecCCceeecceeeccCceeeeeechh- Q lcl|Aclame:pro 1 MAKTTNAAEFNTFVGGLITEASPLTFPQNASIDEVNFILNRDGSRNRRNGMDFENGATKVVCNTLVPADGTIAVTSHNW- 79 (771) Q Consensus 1 Ma~~~~~~e~ntFv~GliTEan~Lt~P~nas~De~N~~L~k~G~r~RR~Gl~~E~s~~~~l~~~~~~s~~~~~vt~~~W- 79 (771) ||+-.+ -+..|.+|+=--.-++-|| +.-.+-+||+..--|--+||-|+.+.-... .++...+. .+.. T Consensus 1 M~~i~~--~~~nl~gGvSqq~d~~r~~-~q~~~~~N~~~~~~gG~~rRpgt~~va~~~--------~~~~~~~~-~f~~~ 68 (826) T protein:vir:78 1 MSYKQS--AYPNLLMGVSQQVAFERLP-GQLSEQINMVSDPVSGLRRRSGIELMASLL--------HTDQPWPR-PYLYH 68 (826) T ss_pred Ccceee--ecchhccceecccchHhhh-hhhhhhhcceeccccccccCCchHhhhhhc--------cCCcCCce-eEEEE Confidence 996544 5778999944444455555 455678999999888889999987764211 11111011 1110 Q ss_pred hhccCccceeEEEEEEccEEEEEecCCcee-eh-eeeEeeecceeCCCcceeeEEeeEEEEEEcCCcceEEE-----ecc Q lcl|Aclame:pro 80 ENAGGEVGRWISLVQVGTELKFFQTTGETL-SE-GNFYNYQFVNMSPSHKLSYAVVDGLLVVANGSRDIYVF-----EYD 152 (771) Q Consensus 80 ~~~~g~v~~~~l~~q~g~~l~~~d~t~~~l-Sn-~~l~~~~fv~~sP~~~is~~~v~G~lVva~~~~~~~i~-----~~~ 152 (771) -+-.+.+---++.+..| -+++|+..+..+ .. .....| ........++++.+...+.|+++..+.... ..+ T Consensus 69 ~~r~s~e~~~~l~~~~g-~irv~~~~~g~~~~~~~~~~~y--~~~~~~~~l~~~t~aD~~fi~n~~~~p~~~~~~~~~~~ 145 (826) T protein:vir:78 69 TNLGGRSIAMLVAQHRG-ELYLFDEKDGRLLMGQPLVHDY--LKASDYRQLRAATVADDLFIANLEVRPEADKADVLGVD 145 (826) T ss_pred eccCCcceEEEEEEcCC-cEEEEECCCCEEEEecCcccce--eecCCcceeEEEEEcCEEEEEcCcEeeeeccccccCCC Confidence 01111122112223233 478776443332 11 111111 112222248999999999999987754211 111 Q ss_pred CCceeeE---------EEEEEEEEeeeeccccccCcceecccccc------------CCCccCch-------------hh Q lcl|Aclame:pro 153 SGSVSVT---------TKRLLVRDLFGVQDIVNGVDLRQGNDIAT------------RPTVQTNA-------------HI 198 (771) Q Consensus 153 ~~s~~~~---------t~~l~iRd~~~l~d~~~g~~~~~~~~~~~------------rpttlS~e-------------h~ 198 (771) ...++.- +..|.|.--.-. .|+.+...-.+.. -+...+.+ -. T Consensus 146 ~~~~~~~~v~~g~y~~~y~v~i~~~~~~----~~~~~s~t~~y~t~~~~~~~~~~~~~~~~~~~~~~a~~l~~~~~~~~~ 221 (826) T protein:vir:78 146 PSKTGWLYIKAGQYSKAFSLTIKVKDNA----TGTTYSHTATYVTPDNASTNPNLAEAPFQTSVGYIAWQLFGKFFGAPE 221 (826) T ss_pred CCceEEEEecccccCceeEEEeccceee----cccccceeEEEEeccCCccccccccccceecchhhheecceeeccccc Confidence 1111110 112222210000 0111100000000 00000000 00 Q ss_pred eeeeec-cccce------eeee--------------------------ccCCCCcce---EEEccccccCCcCcchh--- Q lcl|Aclame:pro 199 YNLRNQ-TFGVP------RVTW--------------------------HSNEPSDPI---VTFRSAASGKFPSNSDS--- 239 (771) Q Consensus 199 YnL~Nq-gW~~~------~~~~--------------------------~s~s~~~~v---v~~~~~~~G~yPSnaD~--- 239 (771) |.+.+- +|... .... -+..+.... ...+-.+....|++.-. T Consensus 222 ~~~~~~t~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~l~a~~p~~~~ 301 (826) T protein:vir:78 222 YTLPNSTKKYPKVDPDPAAATVAGYLNQRGVQDGYIAFRGDGDIVVEVSTDMGNNYGIASGGMSLNATADLPALLPGAGT 301 (826) T ss_pred eeeeccceeEeeccccccceeeccceeecccccceEEEecCCCeEEEeccCCCccceEEEeeEEEecccceeeeeccccc Confidence 111110 00000 0000 000000000 00000111112111100 Q ss_pred ------e-eeccccccCCCcccccccchhhhhccccccccCCCcceEEEeee---------------cCcccceeeeecc Q lcl|Aclame:pro 240 ------V-NLALSKRADVEPSTTDRFRAEDIVLNPIGTYETARGFFIIDAMA---------------RGKSRLEEIVKLK 297 (771) Q Consensus 240 ------~-n~~~~~~s~~e~~~~~~F~~~~~~~n~~Gs~~aarG~yI~d~~~---------------~~~s~~~~~~~~~ 297 (771) + +......+...+..+=+|+ ++.|.+.-.|-. +..+.--+.-++. T Consensus 302 ~~~~~~~~~~~~~~~g~~~~~~y~~~~-------------~~~~~w~e~a~~g~~~~~~tmp~~l~~~~~~~~f~~~~~~ 368 (826) T protein:vir:78 302 PGTGVQFMDGAIMATGSTKAPVYFAWD-------------AANRRWAERAAYGTDWVLKKMPLALRWDESTDTYSLNELE 368 (826) T ss_pred ceEEEEEEeeeEecCCCcccceeEEEE-------------cCCceEEEeeccCcccccccccEEEEEecCCCeEEEeecc Confidence 0 0000000110111111111 111111111110 0000000000000 Q ss_pred cccccccceeeecchhh-ccCCceeeeeecceeEEeeecceeecccccCCcccceeEEEeeecchhhccccccCCCCcCc Q lcl|Aclame:pro 298 QRYPSLSFGVSSLPQDE-TPGGASVVCEYAGRVWYAGFSGQIIDGDDQSPRLVSYILFSQLVDSPADIVNCYQDGDPTST 376 (771) Q Consensus 298 ~~~p~~~~~t~~~p~d~-~~g~~t~v~~~aGRv~y~g~~~~~~~~~~~~p~~~~yv~fSqli~s~~~lg~CyQ~~DPts~ 376 (771) -..+ ..+.....|.-. .-..|++|+=|-+|+++++ |. +|++||.=| |.+=.|.+. T Consensus 369 w~~r-~~gd~~tnp~psf~g~~i~~v~f~q~RL~f~~------------~~---~v~~Srtgd--------~~nF~~~t~ 424 (826) T protein:vir:78 369 YDRR-GSGDEETNPTFNFVKRGITGMTTFQGRLVLLS------------QE---YVCMSASNN--------PHRWFKKSA 424 (826) T ss_pred cccc-ccCcccccCcccccCCCceEEEEEeceEEEee------------CC---eEEEEeccC--------ccccccccc Confidence 0000 000000011100 1234889999999998876 22 588888522 223334432 Q ss_pred hhhhhhhcCCCEEeecCC--CceeEEEeecceeEEEecceEEEEEecccceeeecceeeeeeeeeeecCccceEEeCCeE Q lcl|Aclame:pro 377 EEPELVDTDGGFIRIEGA--HDIINLVNVGSAVMVVAANGIWMIQGGSDYGFTATNYLVTKISEHGCSSPNSVVVVDNSF 454 (771) Q Consensus 377 ~~~dl~dtDGG~I~I~ga--~~Iv~mv~~~ssLlVft~nGVWal~G~S~~~fsAt~y~V~KISd~GcvspnSIV~id~aV 454 (771) ..+.|+|--.+.+-+. ..|.+|+++++.|++||..+-|.|.|+ ..++.++-.+.++|..+|.+-=.=+.+|+++ T Consensus 425 --~~~~DdD~I~~~~~s~~~~~i~~~v~~~~~L~l~T~~~e~~l~~~--~~lTP~~~~~~~~s~~~~~~~~~Pv~vG~~v 500 (826) T protein:vir:78 425 --AALNDDDPIEIAAQGSLTEPYEHAVTFNKDLIVFAKKYQAVVPGG--GIVTPRTAVISITTQYDVDTRAAPAVTGRSV 500 (826) T ss_pred --cCCCCCCcEEEEEccCcceeEEEEEecCCcEEEEecCcEEEEeCC--CcccceeEEEEEEEeecccCCCCceEeCCeE Confidence 2556677666655443 467889999999999999999999774 3799999999999999999877779999999 Q ss_pred EEEecCc-----eEEeccccc--CcccccccCchhhhhhhhhcChhHhccee-EEEEeeccEEEEEecccccccccccce Q lcl|Aclame:pro 455 MYWGDDG-----IYHLTRNQY--GDYVANNLTEKTIQKYYEKIPSDAILNAT-GFYDSYDKKVKWLYNTVLDGRTEPVTE 526 (771) Q Consensus 455 vYwSDsG-----I~~L~~ne~--g~~ss~nLte~tIqt~~~sip~~~k~~~~-g~yD~~~~~v~wly~e~~d~~~~y~tE 526 (771) +|.+++| |+.+..+.. +...+++||.. ++.|..+ ... .-|-.-.+.+.|...+ -+..+.=+ T Consensus 501 ~F~~~r~~~~s~v~e~~~~~~~~~~y~~~dlt~~-~~~l~~~-------~v~~~a~s~~~~~~v~~~~~---~g~l~~~t 569 (826) T protein:vir:78 501 YFAAERALGFMGLHEMAPSPSTDSHYVAEDVTSH-IPSYMPG-------PAEYIQAAASSGYLVFGTSA---ADEMICHQ 569 (826) T ss_pred EEEecCCCceeEEEEEEeeecccCccchHHHHHH-HHHhcCC-------CeEEEEEeCCCCeEEEEEcC---CCeEEEEE Confidence 9999876 999998853 44678888876 5444432 111 2233456667777542 11111101 Q ss_pred eEEe---cccccceeeeecceeccceeeeeeeeeeCCceeeecceEEeecccceeeccceeeeeee----eeeeeeeeeE Q lcl|Aclame:pro 527 LVFD---LALGAFYPSKIGSLTAGRLPIPVGSVKIPPYKLVETGEEVTVASEQVTATGELVTVKVS----TRSPVIRETK 599 (771) Q Consensus 527 lVf~---L~~~afY~~ki~s~~ags~~~~i~s~~vp~y~~~~t~~~V~v~~~~vv~~~~~v~~~~~----~~~~~~r~~~ 599 (771) +++. ..-.||.+|.+. |.... +..+.==.|-++...- ++++.-+-.. .......... T Consensus 570 y~~~~~e~~v~aW~~~~~~----g~v~~-v~~i~d~l~~vv~r~~-----------~~~~~r~~~~~~~~~~~~~~~~~~ 633 (826) T protein:vir:78 570 YLWQGNEKVQNAYHRWTLR----HQIIG-AYFTGDNLMVLIQKGQ-----------EIALGRMHLNSLPAREGLQYPKYD 633 (826) T ss_pred EEecCCcEEEEeEEEEccC----CcEEE-EEEECCeEEEEEEeCC-----------CEEEEEEEEEecCCCccccccccc Confidence 1111 123599999663 33221 1111000111111100 0000000000 0000000000 Q ss_pred EEEEEEcCCCceEEEeeecCCchhhcccc---CC----------cc------------c--chhH-hhhhhcccccccee Q lcl|Aclame:pro 600 YIIVEKLSSPMRISFGGYTDEEFVDWKSV---DG----------IG------------V--DAPA-YLLTGYLAGGDYQR 651 (771) Q Consensus 600 y~~~~~~g~~~~~sF~~~~~d~F~Dw~~~---~~----------~g------------v--d~~s-y~~tgy~~~gd~~r 651 (771) |..-.....++.....+++-+-..|-... +| .+ + +.++ -+.-|+.+.-.++ T Consensus 634 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~VGl~y~s~~~- 712 (826) T protein:vir:78 634 YWRRIEATVDGELELTKQHWDLIKDGAAVYQLQPQVGAYMERYQLGVKRETSTKVFLDVPEAVVGSVYVVGCEFWSKVE- 712 (826) T ss_pred eeEEEEEEEcceeccccceeEEecCCceeeeeccceeeeccccceeccccCCCceEEEeCCCccccEEEEeeceeEEEE- Confidence 00000000001110001111111111000 00 00 0 0000 0111111111111 Q ss_pred eeecceEEEEEeeecceeEecccceEEEcCccceEEEEEEeeccCC-------CCCcccchheeeeeeeh--cccCC-CC Q lcl|Aclame:pro 652 EKFVPYITFHFKKTEDGFVEDAEGDWTPTNQSSCMVQSQWSWTNSP-------ASNKWGRTWQAYRFRRH--FFPDN-ID 721 (771) Q Consensus 652 ~K~~pyl~~~~~~TEd~~t~d~~g~~~~~n~SScl~~~~w~~s~~~-------~~~kw~~~~q~Yr~~r~--~~p~~-~~ 721 (771) -+..+|+ .+.|- ....|. -=+-++..++.+++ ++.|.. ...|+.... .-++- .. T Consensus 713 -----~~~~~~~-~~~g~-~~~~~r-------~~l~r~~~~~~~tg~~~v~v~~~~~~~--~~~~~~~~~~~~~~~l~~g 776 (826) T protein:vir:78 713 -----FTPPVLR-DHNGL-PMTSTR-------AVLHRYNVNFGWTGEFLWRISDTARPN--QPWYDTTPLRLSSRQLNAG 776 (826) T ss_pred -----eCceEEe-cCCCc-ceeecc-------eEEEEEEEEeeccccEEEEeCCCccCc--ceeeeecccccccccccCC Confidence 0112222 22321 111111 01233445555442 222211 112332221 11111 11 Q ss_pred cCCCCcceeeeeccccceeeeEEEEEEEecCCCceEEEeEEEEEEeecC---C Q lcl|Aclame:pro 722 NQFDDGNSVVETKSRLRGSGKVLSLYITTEPKKNLHIYGWSMLVDVNGT---V 771 (771) Q Consensus 722 ~~f~~~~~VV~TK~~~RG~G~~~~~~f~se~~KD~~llG~~~~~~~~g~---~ 771 (771) ..+ .+.-.| +..+||.+.-.+|+++.+.--.|+||+++....-+=. | T Consensus 777 ~~~-~~t~~v--~vp~~~~~~~~~i~i~~d~P~P~tvlai~~~~~y~~r~rrv 826 (826) T protein:vir:78 777 EPL-VDSAVV--PLPARVDMATSKFELSCHSPYDMNVRAVEYNFKSNQTYRRV 826 (826) T ss_pred ccc-ccceEE--EEeeeccCceEEEEEEeCCCCcEEEEEEeEEEEecceeecC Confidence 111 112222 3457899999999999999999999999977643211 2 No 26 >protein:vir:1543 Length: 801 # NCBI annotation: tail tubular protein B # Family: family:all:825 # MgeID: mge:31 # MgeName: phiYeO3-12 # Cross-refs: genbank:acc:NP_052111;swissprot:trembl:q9t105;genbank:gi:9634037;uniprot:Q9T105;genbank:GeneID:1262408 Probab=99.36 E-value=6.6e-11 Score=76.40 Aligned_cols=675 Identities=13% Similarity=0.119 Sum_probs=276.0 Q ss_pred CchhhhhhhhccccceeeeccchhcCCCCccccceeeeeccccchhhhhcceeecCCceeecceeeccCce-eeeeechh Q lcl|Aclame:pro 1 MAKTTNAAEFNTFVGGLITEASPLTFPQNASIDEVNFILNRDGSRNRRNGMDFENGATKVVCNTLVPADGT-IAVTSHNW 79 (771) Q Consensus 1 Ma~~~~~~e~ntFv~GliTEan~Lt~P~nas~De~N~~L~k~G~r~RR~Gl~~E~s~~~~l~~~~~~s~~~-~~vt~~~W 79 (771) ||+-.+ -+..|.+|+=--.-++-|| +.-..-+||+...-|--+||-|+.+.-. +..++.. ...-.|-. T Consensus 1 M~~i~~--s~~n~~~GvSqq~d~~r~~-~q~~~~~N~~~~~~gGl~rRpGt~~va~--------~~~~~~~~~~~~~~~~ 69 (801) T protein:vir:15 1 MALISQ--SIKNLKGGISQQPDILRFA-EQGSVQINGWSSESEGLQKRPPMIHLKT--------LGPAGYVGAQPYVHLI 69 (801) T ss_pred Cceeee--ecchhhcceecCcchHhhh-hhHhhhhcceeccccCcccCCchheeee--------ecCCCCcccceeEEEE Confidence 997654 4588999943333344444 5556789999998888889999865531 1111110 00111111 Q ss_pred hhccCccceeEEEEEEccEEEEEecCCceeeheeeEeeecceeCCCcceeeEEeeEEEEEEcCCcceEEEeccCCc---- Q lcl|Aclame:pro 80 ENAGGEVGRWISLVQVGTELKFFQTTGETLSEGNFYNYQFVNMSPSHKLSYAVVDGLLVVANGSRDIYVFEYDSGS---- 155 (771) Q Consensus 80 ~~~~g~v~~~~l~~q~g~~l~~~d~t~~~lSn~~l~~~~fv~~sP~~~is~~~v~G~lVva~~~~~~~i~~~~~~s---- 155 (771) + .. ... ..+++.-+..+++|+..+.-+.-..-.-| .....|...|+++.+...+.|+++.-++.-....+.. T Consensus 70 ~-~~-~~e-~y~l~~~~~~irv~~~~G~~~~v~~~~~y-~~~~~~~~~l~~~~~aD~~fi~nr~~~~~~~~~~~~~~~~~ 145 (801) T protein:vir:15 70 N-RD-EFE-QYFVVFTGEDIKVFDLDGKEYQVRGDRSY-VRTANPREDLRMITVADYTFVTNRKVVVQSNDQSVNLPGFK 145 (801) T ss_pred E-eC-Cce-EEEEEEcCCeEEEEccCCcEEEEecCCcc-ccccCchhheeEEEEcCEEEEeeCCeeeecccCccccCccC Confidence 1 11 122 23344457789999876532210000111 1123455459999999999998887765332221111 Q ss_pred ---eee---------EEEEEEEEEeeeeccccccCcceeccccccC----CCccCchhheeeee-------ccccceee- Q lcl|Aclame:pro 156 ---VSV---------TTKRLLVRDLFGVQDIVNGVDLRQGNDIATR----PTVQTNAHIYNLRN-------QTFGVPRV- 211 (771) Q Consensus 156 ---~~~---------~t~~l~iRd~~~l~d~~~g~~~~~~~~~~~r----pttlS~eh~YnL~N-------qgW~~~~~- 211 (771) ..+ ++..|.+.--......+..... .+.....+ +..|-..|.-.+-+ .+|..-.. T Consensus 146 ~~~~alv~v~~~~yg~t~~I~i~gs~~~~~t~~~gs~-~~~~~~~s~~~ia~~l~~~~~~~~p~~~~~~~~~~w~~~~~~ 224 (801) T protein:vir:15 146 DQGDALINVRGGQYGRRLSIEFNGAERAAVQLPDGSQ-PAHVNEVDGQAIAEKLAAQLRNNLGNPNNDQDPNKWRFNVGP 224 (801) T ss_pred CCCceEEEeeeccCceeEEEEeCCcceEEEEeccCcc-cchhhhcceeechHHHhhhhhhccCccceeccCccEEEEecC Confidence 110 1112222110000000000000 00000000 00011111110000 13311000 Q ss_pred -----ee---------ccCCC-Ccce---EEEccccccCCcCcchheeecc----ccccCCCcccccccchh-------- Q lcl|Aclame:pro 212 -----TW---------HSNEP-SDPI---VTFRSAASGKFPSNSDSVNLAL----SKRADVEPSTTDRFRAE-------- 261 (771) Q Consensus 212 -----~~---------~s~s~-~~~v---v~~~~~~~G~yPSnaD~~n~~~----~~~s~~e~~~~~~F~~~-------- 261 (771) .. ....+ ++.. +...-.....+|..+ .|.+. ...+..++-.+=+|+.. T Consensus 225 g~~~i~a~~~~~~~~~~t~dg~~~~~~~~~~~~v~~~~~lp~~~--~~G~~v~v~~~~~~~~~~y~v~~~~~~~~w~E~a 302 (801) T protein:vir:15 225 GFIHILAPNNDNVWGLQTKDGYADQLINPVTHYTQSFQKLPINA--PDGYIVKIVGDTSKTADQYYVRFDLNRKVWVETI 302 (801) T ss_pred cEEEEeCCCCcccceeeeccccCceeeeEEeecccceeeeeeec--CCCcEEEEEecCCCccceEEEEEEcCCeeEEeec Confidence 00 00000 0000 111111122233322 11111 00011111111122110 Q ss_pred ---hhhcccccccc-----CCCcceEEEeeecCcccceeeeecccccccccceeeecchhhccCCceeeeeecceeEEee Q lcl|Aclame:pro 262 ---DIVLNPIGTYE-----TARGFFIIDAMARGKSRLEEIVKLKQRYPSLSFGVSSLPQDETPGGASVVCEYAGRVWYAG 333 (771) Q Consensus 262 ---~~~~n~~Gs~~-----aarG~yI~d~~~~~~s~~~~~~~~~~~~p~~~~~t~~~p~d~~~g~~t~v~~~aGRv~y~g 333 (771) .......++|. .+.|.|......-.. -+.-+....-+|+ + .-.+|++|+=|-+|++++| T Consensus 303 ~~g~~~~~~~~tmp~~lv~~~~~~~~~~~~~w~~--r~~gd~~tnp~ps----f-------~g~~~~~v~f~q~RL~f~~ 369 (801) T protein:vir:15 303 GWNTRTHLYYHTMPWALVRASDGNFDFKVLEWGA--RTVGDDTTNPYPS----F-------TGQTINDIFFFRNRLGFLS 369 (801) T ss_pred ccccceeeeccccceEEEeeccceEEEecccccc--ccCCccccCCccc----c-------cCCCceEEEEEcceEEEee Confidence 00000001110 111111111111000 0000000111111 1 1245889999999999976 Q ss_pred ecceeecccccCCcccceeEEEeeecchhhccccccCCCCcCchhhhhhhcCCCEEeecCC--CceeEEEeecceeEEEe Q lcl|Aclame:pro 334 FSGQIIDGDDQSPRLVSYILFSQLVDSPADIVNCYQDGDPTSTEEPELVDTDGGFIRIEGA--HDIINLVNVGSAVMVVA 411 (771) Q Consensus 334 ~~~~~~~~~~~~p~~~~yv~fSqli~s~~~lg~CyQ~~DPts~~~~dl~dtDGG~I~I~ga--~~Iv~mv~~~ssLlVft 411 (771) |. +|++||.=| |.+=.|.+.. .+.|+|--.+.+-+. ..|.+|+++++.|+||| T Consensus 370 ------------~~---~v~~Srtgd--------~~nF~~~t~~--~~~DdD~i~~~~~~~~~~~i~~~v~~~~~L~i~t 424 (801) T protein:vir:15 370 ------------GE---NIILSRTSK--------YFNFFPASVS--NYSDDDPIDVAVSHNRVSTLKYAVPFSEELLLWS 424 (801) T ss_pred ------------CC---eEEEEecCC--------cccccccccc--CCCCCccEEEEecCCcceeeEEEeecCCcEEEEe Confidence 22 699988522 2333454332 466788777766553 46788999999999999 Q ss_pred cceEEEEEecccceeeecceeeeeeeeeeecCccceEEeCCeEEEEecCc----eEEecc-c-ccCcccccccCchhhhh Q lcl|Aclame:pro 412 ANGIWMIQGGSDYGFTATNYLVTKISEHGCSSPNSVVVVDNSFMYWGDDG----IYHLTR-N-QYGDYVANNLTEKTIQK 485 (771) Q Consensus 412 ~nGVWal~G~S~~~fsAt~y~V~KISd~GcvspnSIV~id~aVvYwSDsG----I~~L~~-n-e~g~~ss~nLte~tIqt 485 (771) ..+-|.|.|+ + .++.++-.+.++|..+|.+.=.=+.+|++++|.+.+| |++.-. + +..-+.+++||.. ++. T Consensus 425 ~~~q~~ls~~-~-~lTP~~~~~~~~s~~~~~~~~~Pv~vg~~v~f~~~~g~~~~~~r~~~~~~~~d~y~a~Dlt~~-~~h 501 (801) T protein:vir:15 425 DQAQFVLTAS-G-ILSSRSVELNLTTQFDVQDRARPHGVGRNVYFASPRASFTSINRYYAVQDVSSVKNAEDMTAH-VPN 501 (801) T ss_pred cCcEEEEcCC-C-cccceeEEEEEEEeeeccCCCCceEeCCeEEEEecCCCeeEEEEEEeecccccceehhhHHHH-HHH Confidence 9999999773 3 7999999999999999988777789999999999998 555432 3 3455667777765 433 Q ss_pred hhhhcChhHhcceeEEEEeeccEEEEEecccccccccccceeEE---ecccccceeeeecceeccceeeeeeeeeeCCce Q lcl|Aclame:pro 486 YYEKIPSDAILNATGFYDSYDKKVKWLYNTVLDGRTEPVTELVF---DLALGAFYPSKIGSLTAGRLPIPVGSVKIPPYK 562 (771) Q Consensus 486 ~~~sip~~~k~~~~g~yD~~~~~v~wly~e~~d~~~~y~tElVf---~L~~~afY~~ki~s~~ags~~~~i~s~~vp~y~ 562 (771) |. +....... ...+...|++-..-+.+..+.=+++. ...-.||.+|.+. |...+++.. ... T Consensus 502 l~-------~~~v~~~~-~~~~~~~~~~~~~~~~~~l~~~~y~~~~~e~~v~aW~~~~~~----g~~~~~~~~--~~~-- 565 (801) T protein:vir:15 502 YI-------PNGVFSIS-GTTAENFAAILTSGAPNRVYIYKFLYIDEEIRQQSWSHWDFG----DNVTVFAAQ--VIN-- 565 (801) T ss_pred hc-------CCceEEEE-EeCCCCcEEEEEEcCCCEEEEEEEecCCCceEEEeeEEEEcC----CCEEEEEEE--ecC-- Confidence 33 22222111 11222223332222333221101111 2334599999773 332222211 000 Q ss_pred eeecceEEeecccceeeccceeeeeeeeeeeeeeeeEEEEEEEcCCCceEEEeeecCCchh---hccccCCcccchh--- Q lcl|Aclame:pro 563 LVETGEEVTVASEQVTATGELVTVKVSTRSPVIRETKYIIVEKLSSPMRISFGGYTDEEFV---DWKSVDGIGVDAP--- 636 (771) Q Consensus 563 ~~~t~~~V~v~~~~vv~~~~~v~~~~~~~~~~~r~~~y~~~~~~g~~~~~sF~~~~~d~F~---Dw~~~~~~gvd~~--- 636 (771) +.--+-+.-... .++.-+-.......+....|-+-.|-+....+.=.+|+.+.+. +|..+. |.+|. T Consensus 566 ---d~l~~~v~r~~~---~~~~r~~~~~~~~~~~~~~~~~~lD~~~~~~~~~~t~~~~~~~~~~~~~~~~--gl~~l~g~ 637 (801) T protein:vir:15 566 ---STMTVLMGNEHA---VWMGRLHFTKNSIDIPGEPYRLYIDAKRKYTIPAGTYNDDTYQTSISLATIY--GMNFTKGR 637 (801) T ss_pred ---CEEEEEEEecCc---EEEEEEEEccccccCCCcceeeeeeeeeeEeeccceeccCceeccccccccc--ccccccce Confidence 000000000000 0000000000000000001111111111111111233333222 111100 11110 Q ss_pred Hh---h----------hhhc------cccccceeee---ecceE------EEEEeeecceeEecccceEEEcCccceEE- Q lcl|Aclame:pro 637 AY---L----------LTGY------LAGGDYQREK---FVPYI------TFHFKKTEDGFVEDAEGDWTPTNQSSCMV- 687 (771) Q Consensus 637 sy---~----------~tgy------~~~gd~~r~K---~~pyl------~~~~~~TEd~~t~d~~g~~~~~n~SScl~- 687 (771) .+ . ..|+ +..||....+ -+||. ..++++. +++|..... ..|.+ T Consensus 638 ~v~v~~dG~~~~~~~~~~g~~~~~~~~i~~~~~~~~v~vGl~y~~~~~~~~~~~~~~------~~~~~~~~~--~~~rl~ 709 (801) T protein:vir:15 638 VSVVFPDGKIIEVDQPINGWSSDPVLRLDGNQEGQVVYIGFNIPFTYTFSKFLIKKT------AEDGSTATE--DIGRLQ 709 (801) T ss_pred EEEEEeCCceeeeeeecCcccCcceEEEcCCCCCcEEEEeeeeeEEEEecceEEecc------CCCCCceee--eeccEE Confidence 00 0 0011 0111111000 11111 1122221 222222211 22222 Q ss_pred --EEEEeeccCCCCCcc--cchheeeeeee---hcccCCCC-c--CCCCcceeeeeccccceeeeEEEEEEEecCCCceE Q lcl|Aclame:pro 688 --QSQWSWTNSPASNKW--GRTWQAYRFRR---HFFPDNID-N--QFDDGNSVVETKSRLRGSGKVLSLYITTEPKKNLH 757 (771) Q Consensus 688 --~~~w~~s~~~~~~kw--~~~~q~Yr~~r---~~~p~~~~-~--~f~~~~~VV~TK~~~RG~G~~~~~~f~se~~KD~~ 757 (771) ++.+++.+++.= ++ .++..-+-|.+ ++.-+.+. . ....+. + +-.++|..+-.+++++++.--.|+ T Consensus 710 l~r~~~~~~~tg~~-~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tg~--~--~vp~~g~~~~~~v~i~~d~P~P~t 784 (801) T protein:vir:15 710 LRRAWVNYEDSGAF-TIRVNNLSREFIYTMAGARLGSDNLRVGRSNIGTGQ--Y--RFPVVGNAQTNLVTIESDASTPLN 784 (801) T ss_pred EEEEEEEeccCcce-EEEECCcccccceeecCcccccccccccccccccce--E--EEEEeecCceEEEEEEECCCCcEE Confidence 445555554321 11 11111122221 11111111 1 112232 2 235789999999999999999999 Q ss_pred EEeEEEEEEeecCC Q lcl|Aclame:pro 758 IYGWSMLVDVNGTV 771 (771) Q Consensus 758 llG~~~~~~~~g~~ 771 (771) ||+.+.+.+.+=.= T Consensus 785 vlsi~~e~~y~~r~ 798 (801) T protein:vir:15 785 IIGCGWEGNYLRRS 798 (801) T ss_pred EEEEEEEEEEeccc Confidence 99988777665443 No 27 >protein:vir:7021 Length: 803 # NCBI annotation: tail protein # Family: family:all:825 # MgeID: mge:141 # MgeName: SP6 # Cross-refs: genbank:acc:NP_853594;genbank:gi:31711676;genbank:GeneID:1481802 Probab=99.33 E-value=9.9e-11 Score=75.43 Aligned_cols=659 Identities=13% Similarity=0.087 Sum_probs=276.4 Q ss_pred CchhhhhhhhccccceeeeccchhcCCCCccccceeeeeccccchhhhhcceeecCCceeecceeeccCceeeeeechhh Q lcl|Aclame:pro 1 MAKTTNAAEFNTFVGGLITEASPLTFPQNASIDEVNFILNRDGSRNRRNGMDFENGATKVVCNTLVPADGTIAVTSHNWE 80 (771) Q Consensus 1 Ma~~~~~~e~ntFv~GliTEan~Lt~P~nas~De~N~~L~k~G~r~RR~Gl~~E~s~~~~l~~~~~~s~~~~~vt~~~W~ 80 (771) |-.++. +-.|.+|+=----.+-|| +.-.+-+||+...-|--+||-|+.+... +..+..+-...-+-++ T Consensus 1 ~~v~~s---~~nl~~GvSqQ~d~~R~~-~q~~~~~N~~~~~~gGl~rRpGt~~va~--------l~~~~~~~~~~~~~~~ 68 (803) T protein:vir:70 1 MEVQGS---LGRQIQGISQQPPAVRLD-GQCSEMVNMVPDVVEGTKSRMGTTHIAK--------LLEYGEDDMAVHHYRR 68 (803) T ss_pred CeEEee---cchhccccccCchHHhhh-hhhhhhhcceeeeccccccCChhhhhhh--------hcCCCcccceeeEEEe Confidence 665543 455667733333344454 4556789999998888889999877631 1112111111111111 Q ss_pred hccCccceeEEEEEEccEEEEEecCCcee--ehee-eEeeecceeCCCcceeeEEeeEEEEEEcCCcceEEEeccCCcee Q lcl|Aclame:pro 81 NAGGEVGRWISLVQVGTELKFFQTTGETL--SEGN-FYNYQFVNMSPSHKLSYAVVDGLLVVANGSRDIYVFEYDSGSVS 157 (771) Q Consensus 81 ~~~g~v~~~~l~~q~g~~l~~~d~t~~~l--Sn~~-l~~~~fv~~sP~~~is~~~v~G~lVva~~~~~~~i~~~~~~s~~ 157 (771) ..-|.+- -+.++.-+.-++||+..+..+ ++.. +..|--..-.|...|+++.+...+.|+++.-++.. ..+...-. T Consensus 69 ~~~~~e~-~~~~~~~~~~irv~~~~G~~~~v~~~~~~~~~l~~~~~~~~~l~~~tvaD~~fi~n~~~~~~~-~~~~~~~~ 146 (803) T protein:vir:70 69 GGEGEEE-YFFIMKKGQVPEIFDKQGRKCMVQSQDAPMTYLSEVTNPREDVQFMTIADVTFMLNRKKIVKA-RPERSPQV 146 (803) T ss_pred cCCCceE-EEEEEecCCeEEEEEcCCcEEEEecCCceeEEEeecCCChhheeEEEEcCEEEEecCceeeee-ccccCCCC Confidence 1111111 234444455588888755433 1111 11111011122334899999999999988765531 11111001 Q ss_pred eEEEEEEEEEe-eeecc--ccccCcce--eccc--cccCCCccCchhh----eeeee-----ccccceee------eecc Q lcl|Aclame:pro 158 VTTKRLLVRDL-FGVQD--IVNGVDLR--QGND--IATRPTVQTNAHI----YNLRN-----QTFGVPRV------TWHS 215 (771) Q Consensus 158 ~~t~~l~iRd~-~~l~d--~~~g~~~~--~~~~--~~~rpttlS~eh~----YnL~N-----qgW~~~~~------~~~s 215 (771) -+...+.+|.- ++-+- .++|+..- ..++ .+..+...+.+++ +...+ .+|..-+. ... T Consensus 147 ~~~~~~~vr~g~y~~~y~itIng~~~a~~~t~~~~~~~~~~~~~~~~ia~~l~~~~~~~~s~a~~~~~~~g~~~~i~~~- 225 (803) T protein:vir:70 147 GSTAIVFMAYGQYGTHYKIIIDGVVAAGYKTRDGAEAHHIEDIRTESIAYNLYQSLQSWDKIADYEIQLDGTSIYITRR- 225 (803) T ss_pred CCceEEEEeecCCcceEEEEeCCcceEEEEeCCCcccccccccchhhhhhhhhhheeccccccceEEEECCcEEEEEEc- Confidence 11112333322 11000 01111100 0000 0001111111111 11111 12321110 000 Q ss_pred CCCCcceEEEccc----------------cccCC----cCcchheeeccccccCCCcccccccchhhhhcccccc--ccC Q lcl|Aclame:pro 216 NEPSDPIVTFRSA----------------ASGKF----PSNSDSVNLALSKRADVEPSTTDRFRAEDIVLNPIGT--YET 273 (771) Q Consensus 216 ~s~~~~vv~~~~~----------------~~G~y----PSnaD~~n~~~~~~s~~e~~~~~~F~~~~~~~n~~Gs--~~a 273 (771) .++.+.....+ +...= |-+++.. .. +..+..++.-+-+|+.... ..++ -.+ T Consensus 226 --~~~~~~~~~t~~g~~~~~~~~~~~~v~~~~~Lp~~~~~g~~v~-v~-~~g~~~~d~y~v~~~~~~~---~~~~w~e~a 298 (803) T protein:vir:70 226 --DGSTTFDITTEDGAKGKDLVAIKYKVASTDLLPSRAPEGYKVQ-VW-PTGSKPESRYWLQAEKQNG---NIVSWKETL 298 (803) T ss_pred --CCCCeeEEEeecCcCCcEEEEEEecccceeeccccCCCCceEE-EE-cCCCCCCceeeEEEEeccC---CccceEeee Confidence 01111110000 00000 1011100 00 0001111111122221110 0011 111 Q ss_pred CCcceEE-----------EeeecCcccceeeeecc---------cccccccceeeecchhhccCCceeeeeecceeEEee Q lcl|Aclame:pro 274 ARGFFII-----------DAMARGKSRLEEIVKLK---------QRYPSLSFGVSSLPQDETPGGASVVCEYAGRVWYAG 333 (771) Q Consensus 274 arG~yI~-----------d~~~~~~s~~~~~~~~~---------~~~p~~~~~t~~~p~d~~~g~~t~v~~~aGRv~y~g 333 (771) +.|.++. ..........-++.... .+-|-+++ .|. ...+.|++|+=|-+|++++| T Consensus 299 ~~g~~~~~~~~t~p~~~v~~~~~~~~~~~~~~~~~~~~r~~gdd~tnp~psf--~~~---~~~~~~~~v~f~q~RL~f~~ 373 (803) T protein:vir:70 299 AADVLIGFDKSTMPYIIERTGFVNGIAQFKIRQGDWEDRKVGDDLTNPMPSF--IDE---EVPQTLGGMFMVQNRLCVTA 373 (803) T ss_pred ccceeeeeecccccEEEEEEEEeecceeEEEEeeccccccccccccCccccc--cCc---cCCCCceeEEEEeceEEEee Confidence 1121110 00000000000111100 01111111 111 23467999999999999976 Q ss_pred ecceeecccccCCcccceeEEEeeecchhhccccccCCCCcCchhhhhhhcCCCEEeecCC--CceeEEEeecceeEEEe Q lcl|Aclame:pro 334 FSGQIIDGDDQSPRLVSYILFSQLVDSPADIVNCYQDGDPTSTEEPELVDTDGGFIRIEGA--HDIINLVNVGSAVMVVA 411 (771) Q Consensus 334 ~~~~~~~~~~~~p~~~~yv~fSqli~s~~~lg~CyQ~~DPts~~~~dl~dtDGG~I~I~ga--~~Iv~mv~~~ssLlVft 411 (771) |. +|++||.=| |.+=.|++.. .+.|+|--.+.+-+. ..|..|+++++.|+||| T Consensus 374 ------------~~---~v~~Srtgd--------~~nF~~~t~~--~~~DdD~I~~~~ss~~~~~i~~~v~~~~~L~i~T 428 (803) T protein:vir:70 374 ------------GE---AVIATRTSY--------FFDFFRYTAV--SAVATDPFDVFSDASEVYQLKHAVTLDGSTVLFA 428 (803) T ss_pred ------------CC---eEEEEccCC--------cccccccccc--CCCCCccEEEEecCCcceeeEEEeecCCcEEEEe Confidence 22 688888522 2233354322 466888777766543 57788999999999999 Q ss_pred cceEEEEEecccceeeecceeeeeeeeeeecCccceEEeCCeEEEEecCc----eEEecccc-cCcccccccCchhhhhh Q lcl|Aclame:pro 412 ANGIWMIQGGSDYGFTATNYLVTKISEHGCSSPNSVVVVDNSFMYWGDDG----IYHLTRNQ-YGDYVANNLTEKTIQKY 486 (771) Q Consensus 412 ~nGVWal~G~S~~~fsAt~y~V~KISd~GcvspnSIV~id~aVvYwSDsG----I~~L~~ne-~g~~ss~nLte~tIqt~ 486 (771) ..+-|.|+|+ ..++.++..+.++|..+|.+-=.=+.+|++++|.+.+| |+.+..+. ..-..+++||.. ++.| T Consensus 429 ~~~q~~l~g~--~~lTP~~~~i~~~s~~~~~~~~~Pv~vg~~v~fv~~~g~~s~vre~~~~~~~d~y~a~Dlt~~-a~hl 505 (803) T protein:vir:70 429 DKSQFILPGD--KPLEKSNVLLKPVTTFEVNNNVKPVATGESVMFATSEGAYSGIREFYTDSYSDTKKAQAITSH-VNKL 505 (803) T ss_pred cCcEEEEeCC--CcccceeEEEEEEEEeeccCCCccEEeCCeEEEeccCCCeeEEEEEeccccccceehhhhhhh-hHhh Confidence 9999999874 37999999999999999998888899999999999987 87788774 344778888876 4444 Q ss_pred hhhcChhHhccee-EEEEeeccEEEEEecccccccccccceeE-Ee--cccccceeeeecceeccceeeeeeeeeeCCce Q lcl|Aclame:pro 487 YEKIPSDAILNAT-GFYDSYDKKVKWLYNTVLDGRTEPVTELV-FD--LALGAFYPSKIGSLTAGRLPIPVGSVKIPPYK 562 (771) Q Consensus 487 ~~sip~~~k~~~~-g~yD~~~~~v~wly~e~~d~~~~y~tElV-f~--L~~~afY~~ki~s~~ags~~~~i~s~~vp~y~ 562 (771) ..+ ... .-+=...+.+.|+..++-+.-+.|+ ++ .+ ..-.||.+|.+ .|... ++.. +|. T Consensus 506 ~~~-------~v~~~~~~~~~~~~v~~~~~~~~~l~~~~--yl~~~~e~~v~aW~r~~~----~g~~~-~~~~--~~~-- 567 (803) T protein:vir:70 506 LEG-------NVIMMSASTNVNRLLVLTDKYRNIIYCYD--WLWQGTERVQAAWHKWEW----PLGTF-IRGM--FYS-- 567 (803) T ss_pred cCC-------ceEEEEEeCCCCeEEEEEEcCCCeEEEEE--EEecCCcEEEEeEEEEEc----CCCEE-EEEE--Eec-- Confidence 432 111 1221334555555433222222211 11 11 12349999966 34322 2222 110 Q ss_pred eeecceEEeecccceeeccceeeeeeeeeeeeeeeeEEEEEEEcCCCceEEEeeecCCchhhccc--------------- Q lcl|Aclame:pro 563 LVETGEEVTVASEQVTATGELVTVKVSTRSPVIRETKYIIVEKLSSPMRISFGGYTDEEFVDWKS--------------- 627 (771) Q Consensus 563 ~~~t~~~V~v~~~~vv~~~~~v~~~~~~~~~~~r~~~y~~~~~~g~~~~~sF~~~~~d~F~Dw~~--------------- 627 (771) .+++ -.+.++ ...+.++++.-...... ......-|.|++. T Consensus 568 ----~d~l-------------~~vv~r-------~~~g~~ier~~~~~~~~-~~~~~~~~lD~~~~~~~~~~~~~~~~~~ 622 (803) T protein:vir:70 568 ----GEHL-------------YLLIER-------GSTGVYLERMDMGDALV-YNLNDRIRMDRQAELIFRHIKAEDVWVS 622 (803) T ss_pred ----CCEE-------------EEEEEE-------CCCeEEEEEEecccccc-cCCcceeEeccceeEeeccccCCceeee Confidence 0111 000000 00111122111100000 0000011223221 Q ss_pred -------cCCcccch------hHhhhhhccc----------------ccccee-e--eecceE------EEEEeeeccee Q lcl|Aclame:pro 628 -------VDGIGVDA------PAYLLTGYLA----------------GGDYQR-E--KFVPYI------TFHFKKTEDGF 669 (771) Q Consensus 628 -------~~~~gvd~------~sy~~tgy~~----------------~gd~~r-~--K~~pyl------~~~~~~TEd~~ 669 (771) .+..+.++ .+++...+.. .++... . .-.||. ..+++. +.+- T Consensus 623 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~g~~t~~~~~~~~~~~~~a~~v~VGl~Y~~~~~~~~~~i~~-~~~~ 701 (803) T protein:vir:70 623 EPLPWQPTDVTLLDCVLIDGWDSYIGGSFLFSYNPGDNTLTTTFDMHDDDHVKAKVVVGQLYPQEFEPTQVVIRD-NQER 701 (803) T ss_pred ecccccCcccceeeEEEeeeeeeecCCeEEEEEcCCCccceeeeeEECCCCcccEEEEeeeeeEEEeecceEEEc-CCCc Confidence 11111110 0111000000 000000 0 011111 112221 1221 Q ss_pred Ee-cccceEEEcCccceEEEEEEeeccCCCCC-cccchh----eeeee-ee-hcccCCCCcC--CCCcceeeeeccccce Q lcl|Aclame:pro 670 VE-DAEGDWTPTNQSSCMVQSQWSWTNSPASN-KWGRTW----QAYRF-RR-HFFPDNIDNQ--FDDGNSVVETKSRLRG 739 (771) Q Consensus 670 t~-d~~g~~~~~n~SScl~~~~w~~s~~~~~~-kw~~~~----q~Yr~-~r-~~~p~~~~~~--f~~~~~VV~TK~~~RG 739 (771) +. .+.+ =+-++.|++.+++.-. +..++. +.|.. .| .--|++.... ...| ++ +--++| T Consensus 702 ~~~~~~~---------rl~r~~~~~~~sg~~~v~v~~~~~~~~~~~~~s~~~~g~~~~~~g~~~~~tg--~~--~vP~~~ 768 (803) T protein:vir:70 702 VSYIDVP---------TVGLVHLNLDKYPDFKVEVKNLKSGKVRNVLASNRVGGAINNIVGYVEPREG--VF--KFPLRS 768 (803) T ss_pred ccccccc---------EEEEEEEEeecccceEEEEecCCccccceeeccchhccccccccCccccccc--eE--EEEeec Confidence 10 0011 1345667777664321 111111 12221 11 1112221111 1122 22 234688 Q ss_pred eeeEEEEEEEecCCCceEEEeEEEEEEeecCC Q lcl|Aclame:pro 740 SGKVLSLYITTEPKKNLHIYGWSMLVDVNGTV 771 (771) Q Consensus 740 ~G~~~~~~f~se~~KD~~llG~~~~~~~~g~~ 771 (771) ...-.+++++++.--.|+||+.+.+.+.+=+= T Consensus 769 ~~~~~~v~i~~d~P~P~tvlsi~weg~y~~r~ 800 (803) T protein:vir:70 769 LSTDTVYRVMVESPHTFQLRDIEWEGSYNPTK 800 (803) T ss_pred cCcceEEEEEECCCCCeEEEEEEEEEEEeccc Confidence 88889999999999999999877766554332 No 28 >protein:vir:1778 Length: 680 # NCBI annotation: tail protein A # Family: family:all:825 # MgeID: mge:38 # MgeName: P60 # Cross-refs: genbank:acc:NP_570344;genbank:gi:18640503;genbank:GeneID:932716 Probab=99.24 E-value=1.6e-11 Score=79.81 Aligned_cols=456 Identities=16% Similarity=0.136 Sum_probs=192.9 Q ss_pred Cchhhhhhhhccccceeee-----------------------------------ccchh-cCCCCccccceeeeeccccc Q lcl|Aclame:pro 1 MAKTTNAAEFNTFVGGLIT-----------------------------------EASPL-TFPQNASIDEVNFILNRDGS 44 (771) Q Consensus 1 Ma~~~~~~e~ntFv~GliT-----------------------------------Ean~L-t~P~nas~De~N~~L~k~G~ 44 (771) |+-+..+-.++..-.|||. .+.+. -....+...-.|..+..+.+ T Consensus 141 v~~~~~~~~~~~~~~g~~~v~~~ayg~ty~v~ing~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Ag~~t~~~~~~a~la 220 (680) T protein:vir:17 141 VQPTTWSRSFSRRPEGLVTIGAAGYGTSYIVDFATEDSGQQRRWAVQEMQAPKTKRKKGDGSPDEAGETTVNNWNGTGLS 220 (680) T ss_pred EEEeccCCCCCCCCeeEEEEEEeeeeeEEEEEEeccccceeeeeeeeeeeccccccccccccCCCCcceeeeeeeeeeee Confidence 0000000011111222222 00000 11112222224555556666 Q ss_pred hhhh---hcceeecCCceeecceeeccCceeeeeechhhhccCccceeEEEEEEccEEE--EEecCCcee-eheee--Ee Q lcl|Aclame:pro 45 RNRR---NGMDFENGATKVVCNTLVPADGTIAVTSHNWENAGGEVGRWISLVQVGTELK--FFQTTGETL-SEGNF--YN 116 (771) Q Consensus 45 r~RR---~Gl~~E~s~~~~l~~~~~~s~~~~~vt~~~W~~~~g~v~~~~l~~q~g~~l~--~~d~t~~~l-Sn~~l--~~ 116 (771) ++.| .+.....+.+ ....+ .| ...+.-+.-.|.+.++.. .+.+-|.... +.+-...+. ++... ++ T Consensus 221 ~~l~~~~~~~~~~~g~~-~~~~y-~~-~~~l~~tg~~~~~~~~t~----~v~~~G~~y~IsI~~~~~~~~~~~~~s~~~~ 293 (680) T protein:vir:17 221 FRVKVEARAFLVDDGEE-YGHNY-IP-YVTLLTPGNNTSPFPDTI----RVDVSGEGWDIKVTKQIQSKVYANLGTAQFT 293 (680) T ss_pred eeeeeccceeeecCCCc-eEEEE-ee-EEEEecCCccccccCceE----EEecccceeEEEEccceeeEeccCccceeee Confidence 6655 2222222222 21111 11 111111222333333211 1222232221 111111111 00000 00 Q ss_pred eecce----eCCC-------------cceeeEEeeEEEEEEcCCc-ceEEEeccCCceeeEEEEEEEEEeeeeccccccC Q lcl|Aclame:pro 117 YQFVN----MSPS-------------HKLSYAVVDGLLVVANGSR-DIYVFEYDSGSVSVTTKRLLVRDLFGVQDIVNGV 178 (771) Q Consensus 117 ~~fv~----~sP~-------------~~is~~~v~G~lVva~~~~-~~~i~~~~~~s~~~~t~~l~iRd~~~l~d~~~g~ 178 (771) ...-. -+|. ..+++..+-+.+.|...+- ...++......-...++.-.++.. ++ T Consensus 294 t~~~~~a~~at~~~Ia~~L~~~i~~~~~~~~~~~g~~i~i~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~--v~------ 365 (680) T protein:vir:17 294 TPVDQSGGGASTSDIVTGLSAAINGLGTFTAESIGNVIRVRYSDPTRTDEFTMSARGGTSGTGLESIKYS--VD------ 365 (680) T ss_pred eccCCcccceeHHHHHHHHHHhhcccCcEEEEECCCEEEEEeccCCCceEEEeeccCCCCceeeeeeeee--ec------ Confidence 00000 0000 0122232323333311110 111122111111111222222222 22 Q ss_pred cceeccccccCCCccCchhheeeeeccccceeeee-ccCCCCcceEEEccccccCCcCcchheeeccccccCCCccccc- Q lcl|Aclame:pro 179 DLRQGNDIATRPTVQTNAHIYNLRNQTFGVPRVTW-HSNEPSDPIVTFRSAASGKFPSNSDSVNLALSKRADVEPSTTD- 256 (771) Q Consensus 179 ~~~~~~~~~~rpttlS~eh~YnL~NqgW~~~~~~~-~s~s~~~~vv~~~~~~~G~yPSnaD~~n~~~~~~s~~e~~~~~- 256 (771) +...-|...- | |-. -+... .+++...++++|...-....-+. ...|.|..... T Consensus 366 ------~~~~Lp~~a~--------~-g~~-v~v~~~~~~~~~~Yyv~~~~~~~~~~~~~---------~~~W~E~~~~~~ 420 (680) T protein:vir:17 366 ------TLAELPTKCW--------N-DYQ-VAVRNTQDTEVDDYYVKFETDVEDADVPG---------SGYWVETVKNGD 420 (680) T ss_pred ------cccccccccC--------C-CcE-EEEEeCCCCcccceEEEEeccCcccCccc---------ccceeecccCcc Confidence 1111233221 1 211 12222 22223334566644322222222 22222222111 Q ss_pred --ccc----hhhhhccccccccCCCcceEEEeeecCccc----ceeeeecccccccccceeeecchhhccCCceeeeeec Q lcl|Aclame:pro 257 --RFR----AEDIVLNPIGTYETARGFFIIDAMARGKSR----LEEIVKLKQRYPSLSFGVSSLPQDETPGGASVVCEYA 326 (771) Q Consensus 257 --~F~----~~~~~~n~~Gs~~aarG~yI~d~~~~~~s~----~~~~~~~~~~~p~~~~~t~~~p~d~~~g~~t~v~~~a 326 (771) .|+ |..|..+ +.|-|.+-+.+.+... ....+--..+ |.|++ ......|++|+=|- T Consensus 421 ~~~~~~~tmp~~l~r~-------~~g~f~~~~~~~~~~~~~~~~r~~Gdd~tn-p~psF-------~~~G~~p~~v~f~q 485 (680) T protein:vir:17 421 DGGLVDDTMPHVLVRN-------ALGDFTFSSLNNSSYGKTWADRSVGSEDTN-PHPTF-------TESGNGIYGMFMYK 485 (680) T ss_pred cceeccCcceEEEEEc-------cCceeEEEeeccccccccccccccCCcccC-CCccc-------ccCCCCceEEEEEc Confidence 111 2223222 3344444433211110 0001110111 11122 11234699999999 Q ss_pred ceeEEeeecceeecccccCCcccceeEEEeeecchhhccccccCCCCcCchhhhhhhcCCCEEeecCC--CceeEEEeec Q lcl|Aclame:pro 327 GRVWYAGFSGQIIDGDDQSPRLVSYILFSQLVDSPADIVNCYQDGDPTSTEEPELVDTDGGFIRIEGA--HDIINLVNVG 404 (771) Q Consensus 327 GRv~y~g~~~~~~~~~~~~p~~~~yv~fSqli~s~~~lg~CyQ~~DPts~~~~dl~dtDGG~I~I~ga--~~Iv~mv~~~ 404 (771) +|+++++ |. +|++||.=| |.+=.|.++. .+.|+|.-.+.+-+. ..|.+|++++ T Consensus 486 ~RL~f~s------------~~---~v~~Srtgd--------~~nF~~~t~~--~~~DdD~I~~~~ss~~~~~i~~~v~~~ 540 (680) T protein:vir:17 486 NRLGFLT------------QD---AVIMSQVGD--------YFNFYATSGV--TISDADPIDMATSDTKPVKLEAAISST 540 (680) T ss_pred ceEEEee------------CC---eEEEEccCC--------cccccccccc--cCCCCccEEEEEcCCcceeeeEEeecC Confidence 9998875 22 589988522 2333455422 467888877777664 6888999999 Q ss_pred ceeEEEecceEEEEEecccceeeecceeeeeeeeeeecCccceEEeCCeEEEEecCc----eEEeccc-ccCcccccccC Q lcl|Aclame:pro 405 SAVMVVAANGIWMIQGGSDYGFTATNYLVTKISEHGCSSPNSVVVVDNSFMYWGDDG----IYHLTRN-QYGDYVANNLT 479 (771) Q Consensus 405 ssLlVft~nGVWal~G~S~~~fsAt~y~V~KISd~GcvspnSIV~id~aVvYwSDsG----I~~L~~n-e~g~~ss~nLt 479 (771) +.|++||..+-|.|.|+ +..++.++-.+.++|..+|.+.=.=+.+|++++|.+.+| |+.+..+ +..-+.+++|| T Consensus 541 ~~L~l~t~g~q~~ls~~-~~~lTP~~~~i~~~s~~~~~~~~~Pv~vG~~v~Fv~~~g~~s~vre~~y~~~~d~y~a~DlT 619 (680) T protein:vir:17 541 SGAILFGNQAQFRLSSP-DESFGPKTATLDKISNYTYESKADPVQTGVSMIFPTNMGTYSSVYELSTESAKGTPVIEDSS 619 (680) T ss_pred CcEEEEecCeEEEEecC-CceecceeEEEEEEEeecccCCCCceEeCCeEEEeecCCCcceEEEEeeeeccCceehhhHH Confidence 99999999999999875 457999999999999999988777788999999999976 7777666 34556678777 Q ss_pred chhhhhhhhhcChhHhcceeEEEEeeccEEEEEecccccccccccceeEE---ecccccceeeeecceec Q lcl|Aclame:pro 480 EKTIQKYYEKIPSDAILNATGFYDSYDKKVKWLYNTVLDGRTEPVTELVF---DLALGAFYPSKIGSLTA 546 (771) Q Consensus 480 e~tIqt~~~sip~~~k~~~~g~yD~~~~~v~wly~e~~d~~~~y~tElVf---~L~~~afY~~ki~s~~a 546 (771) .. ++.|+. ......+..-..-.-|+.... +.+..+.=+++. ...-.||.+|.+.+.-| T Consensus 620 ~~-a~hl~~-------g~v~~~~~~~~~~~~~~~~~~-~~~~l~~~~yl~~~~e~~v~aW~rw~~~~~d~ 680 (680) T protein:vir:17 620 RV-IPRLIP-------SGLTWSTASMNNDTVFFGNAK-KGRNVYVFRFFNEGQERKVAGWTTWYYEDQDH 680 (680) T ss_pred HH-HHHhcC-------CceEEEEeeCCCCeEEEEEEc-CCCEEEEEEEeeCCCceEEEEEEEEecCCCCC Confidence 65 444433 222222222222233443311 111111000110 23345999999987666 No 29 >protein:vir:103341 Length: 806 # NCBI annotation: tail tubular protein B-like protein # Family: family:all:825 # MgeID: mge:1609 # MgeName: Era103 # Cross-refs: genbank:acc:YP_001039670;genbank:gi:125999999;genbank:GeneID:4818417 Probab=99.10 E-value=2.2e-09 Score=68.09 Aligned_cols=668 Identities=12% Similarity=0.083 Sum_probs=272.3 Q ss_pred CchhhhhhhhccccceeeeccchhcCCCCccccceeeeeccccchhhhhcceeecCCceeecceeeccCceeeeeechhh Q lcl|Aclame:pro 1 MAKTTNAAEFNTFVGGLITEASPLTFPQNASIDEVNFILNRDGSRNRRNGMDFENGATKVVCNTLVPADGTIAVTSHNWE 80 (771) Q Consensus 1 Ma~~~~~~e~ntFv~GliTEan~Lt~P~nas~De~N~~L~k~G~r~RR~Gl~~E~s~~~~l~~~~~~s~~~~~vt~~~W~ 80 (771) |-.++. +-.|.+|.=----++-|| +.-..-+||+..--|--+||-|+.+.-+- .+.. .+...+ |..+ T Consensus 1 ~~v~~s---~~nl~~GvSqQ~d~~R~~-~q~~~~~N~~~~~~~Gl~rRPgt~~va~l----~~~~---~~~~~~--~~~~ 67 (806) T protein:vir:10 1 MEVQGS---YGRQLQGVSQQPIAVRLP-GQVTSQLNAVPNVVDGLKTRMGSKHLARI----LNSL---DANSLI--HHYK 67 (806) T ss_pred CeeEee---cchhccceeccChhHhhh-hhhhhhhcceeccccccccCCchhhhhhh----cCCC---CccceE--EEEE Confidence 654443 445666633333344444 44457789999988888899998666421 1111 111122 2222 Q ss_pred hccCccceeEEEEEEccEEEEEec-CCceeeh---eeeEeeecceeCCCcceeeEEeeEEEEEEcCCcceEEEecc---C Q lcl|Aclame:pro 81 NAGGEVGRWISLVQVGTELKFFQT-TGETLSE---GNFYNYQFVNMSPSHKLSYAVVDGLLVVANGSRDIYVFEYD---S 153 (771) Q Consensus 81 ~~~g~v~~~~l~~q~g~~l~~~d~-t~~~lSn---~~l~~~~fv~~sP~~~is~~~v~G~lVva~~~~~~~i~~~~---~ 153 (771) . |+..-+++++..+..+++|+. ++..+.. ..+..|---...|...++++.+...+.|+++.-+++-..-. . T Consensus 68 ~--~~~~~~y~v~~~~g~i~v~~~~~G~~~~v~~~~~~~~yl~~~~~~~~~l~~~tvaD~tfi~n~~~~~~~~~~~~~~~ 145 (806) T protein:vir:10 68 R--GDDAEEYFVILQPGQVPVIFTVGGLACPVNTQGSAATYLSSSSLPRETTQLMTIGDYTFVLNRKMPVQARGDVTPSL 145 (806) T ss_pred e--cCCceEEEEEEcCCcEEEEEcCCCcEEEecCCCceEEEeccCCCCcceeeEEEEcCEEEEecCcEeeeecccccCCC Confidence 2 223346677777778888874 4443321 11111110011133349999999999999999876544321 1 Q ss_pred Cceee---------EEEEEEEEEeeeeccccccCcceeccccccCCCccCch----hheeeeec---cccceeee----- Q lcl|Aclame:pro 154 GSVSV---------TTKRLLVRDLFGVQDIVNGVDLRQGNDIATRPTVQTNA----HIYNLRNQ---TFGVPRVT----- 212 (771) Q Consensus 154 ~s~~~---------~t~~l~iRd~~~l~d~~~g~~~~~~~~~~~rpttlS~e----h~YnL~Nq---gW~~~~~~----- 212 (771) ++.+. ++.+|.|-...-..-.+ .++.+ +..+...+.+ .+++..+. +++.-+.. T Consensus 146 ~~~~~v~v~~g~y~~~y~i~Ing~~~a~~~t-----~~~~~-~~~~~~~~~~~~a~~l~~~l~~~~~~~~~~~~~~~g~~ 219 (806) T protein:vir:10 146 DNKGLVYVAYANFSFTYQILINGQVAAEHKT-----ASSED-VKNEDLVRTDYVAGKLLENFNSRTASFPGFSMYQDGNV 219 (806) T ss_pred CcceEEEEeecccCceeeEEeccceEEEEEe-----ccCCC-cccccccchhHHHHHHHhhhcccccccceeEEEEcccE Confidence 22211 01122221111000000 00010 1111111111 11110000 00000000 Q ss_pred e---cc---------CCCC-cc---eEEEcccc----ccCCcCcc------------hheeeccccc-----cCCCcccc Q lcl|Aclame:pro 213 W---HS---------NEPS-DP---IVTFRSAA----SGKFPSNS------------DSVNLALSKR-----ADVEPSTT 255 (771) Q Consensus 213 ~---~s---------~s~~-~~---vv~~~~~~----~G~yPSna------------D~~n~~~~~~-----s~~e~~~~ 255 (771) . +. ..++ +. .+.++-.+ ...-|.++ |.+...+... .|.|.... T Consensus 220 ~~i~~~~~~~~~~~~~~g~~~~~~~~~~~~v~~~~~lp~~~~~g~~v~i~~~~~~~~~~y~v~~~~~~~~~~~w~e~~~~ 299 (806) T protein:vir:10 220 LVVDNSNGANYALTTVDGADGQDLVAIRHKVTNLDTLPNRAPVGYKVQVWPTGSKPESRYWLQAESQDGSKVTWVETIAP 299 (806) T ss_pred EEEecCCCCccEEEEeeCCCCceeEEeecccCccccCccccCCCcEEEEeccCCCCCCceEEEEEeeccCceEEEeeccc Confidence 0 00 0000 00 00000000 01111111 2111111000 01110000 Q ss_pred c---ccc----hhhhhccccccccCCCcceEEEeeecCcccceeeeecccccccccceeeecchhhccCC-ceeeeeecc Q lcl|Aclame:pro 256 D---RFR----AEDIVLNPIGTYETARGFFIIDAMARGKSRLEEIVKLKQRYPSLSFGVSSLPQDETPGG-ASVVCEYAG 327 (771) Q Consensus 256 ~---~F~----~~~~~~n~~Gs~~aarG~yI~d~~~~~~s~~~~~~~~~~~~p~~~~~t~~~p~d~~~g~-~t~v~~~aG 327 (771) . .|+ |..+.....+ ...-|.|.+.+..-... ..+.- .+-|.+++ .| +..|+ +++|+=|-+ T Consensus 300 ~~~~~~~~~t~p~~~v~~~~~--~~~~~~~~~~~~~w~~r---~~Gd~-~tn~~psF--~~----~~~~~~it~v~f~q~ 367 (806) T protein:vir:10 300 GVRKGWNAATMPHVLVRESLN--ANGSANFTYRPGEWEDR---DVGDD-LTNDFPSL--LN----DSSPQPISSMLMVQN 367 (806) T ss_pred ccccceeccccceEEEeeeee--ecccceeEEEecccccc---ccccc-ccCccCcc--cC----CCCCccceEEEEEee Confidence 0 000 0001000000 01122222222211100 00000 01111111 11 12223 478999999 Q ss_pred eeEEeeecceeecccccCCcccceeEEEeeecchhhccccccCCCCcCchhhhhhhcCCCEEeecCC--CceeEEEeecc Q lcl|Aclame:pro 328 RVWYAGFSGQIIDGDDQSPRLVSYILFSQLVDSPADIVNCYQDGDPTSTEEPELVDTDGGFIRIEGA--HDIINLVNVGS 405 (771) Q Consensus 328 Rv~y~g~~~~~~~~~~~~p~~~~yv~fSqli~s~~~lg~CyQ~~DPts~~~~dl~dtDGG~I~I~ga--~~Iv~mv~~~s 405 (771) |+++++ |. +|++||.= .|.+=.|.+.. .+.|+|--.+.+-+. ..|.+|+++++ T Consensus 368 RL~f~s------------~~---~v~~Srsg--------d~~nF~~~t~~--~~~DdD~I~~~~ss~~~~~i~~~v~~~~ 422 (806) T protein:vir:10 368 RLMLTS------------GE---AVVASRTS--------RFFDFFRYTVL--ATVDTDPFDVFADIEEVYNIRWSAQMDG 422 (806) T ss_pred eEEEec------------CC---eEEEEccC--------CcccCcccccc--CCCCCccEEEEEcCCcceeeeeeeecCC Confidence 999874 32 68998852 23334455422 466888877777765 56889999999 Q ss_pred eeEEEecceEEEEEecccceeeecceeeeeeeeeeecCccceEEeCCeEEEEecCc----eEEecccc-cCcccccccCc Q lcl|Aclame:pro 406 AVMVVAANGIWMIQGGSDYGFTATNYLVTKISEHGCSSPNSVVVVDNSFMYWGDDG----IYHLTRNQ-YGDYVANNLTE 480 (771) Q Consensus 406 sLlVft~nGVWal~G~S~~~fsAt~y~V~KISd~GcvspnSIV~id~aVvYwSDsG----I~~L~~ne-~g~~ss~nLte 480 (771) .|++||..+-|.|.|+ ..++.++-.+.++|..+|.+-=.=+.+|++++|.+.+| |+.+..+. ..-..+++||. T Consensus 423 ~L~l~t~~~q~~l~~~--~~lTP~~~~~~~~s~~~~~~~~~Pv~vG~~v~Fv~~~g~~s~vre~~y~~~~d~~~~~DlT~ 500 (806) T protein:vir:10 423 DVVLFTSDQQFTLPGD--KPLTPTSAVIRPVTQFKMTPGVKPAPSGDSILFAFDQGSYSGIREFFTDSYSDTKKAQPATS 500 (806) T ss_pred cEEEEecCcEEEEeCC--CcccceeEEEEEEEeecccCCCCceEeCCeEEEeeCCCCeeEEEEEEeeeeccceehhhHHH Confidence 9999999999999874 37999999999999999976444578999999999987 98888884 34466777776 Q ss_pred hhhhhhhhhcChhHhccee--EEEEeeccEEEEEecccccccccccceeEE---ecccccceeeeecceeccceeeeeee Q lcl|Aclame:pro 481 KTIQKYYEKIPSDAILNAT--GFYDSYDKKVKWLYNTVLDGRTEPVTELVF---DLALGAFYPSKIGSLTAGRLPIPVGS 555 (771) Q Consensus 481 ~tIqt~~~sip~~~k~~~~--g~yD~~~~~v~wly~e~~d~~~~y~tElVf---~L~~~afY~~ki~s~~ags~~~~i~s 555 (771) . ++.|. +.... ..+-.-+..+.|.-. +.+..+.=+++. +..-.||.+|.+.. +-..-.|.+ T Consensus 501 ~-~~hl~-------~g~~~~~~~~~~~~~~~~~~~~---~dg~l~~~ty~~~~~e~~v~aW~rw~~~~---~~~~~~~~~ 566 (806) T protein:vir:10 501 H-VDKYI-------RGKVLELSASSSFNRAFIITSP---DRNILYVYDWLYEGTEKVQNAWHKWSFPA---GTVLHAVSY 566 (806) T ss_pred H-HHHhc-------CCCeEEEEEeCCCCcEEEEEEc---CCCEEEEEEEeecCCceEEEeEEeeeeCC---CeEEEEEEE Confidence 5 43333 22211 122122334555542 222211101111 12245899986622 111101111 Q ss_pred eeeCCceeeecc------eEEeecccc---eeecc--------ceeeeeeeeee--------ee---ee-eeEEEEEEEc Q lcl|Aclame:pro 556 VKIPPYKLVETG------EEVTVASEQ---VTATG--------ELVTVKVSTRS--------PV---IR-ETKYIIVEKL 606 (771) Q Consensus 556 ~~vp~y~~~~t~------~~V~v~~~~---vv~~~--------~~v~~~~~~~~--------~~---~r-~~~y~~~~~~ 606 (771) +.==.|.++.-. ..+.++.-+ ..... +...+..+... .. .. +.+...+..+ T Consensus 567 ~~d~l~~vv~R~~~~~g~~~~~iE~~~~~~~~~~~~~~~~~lD~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 646 (806) T protein:vir:10 567 SNEKLYLVLTRTNTSGGVAGVYIEVMDMGDELEYGLQDRVRMDRRATLSMTYNATTRVWTSSALPWLPQDLSSLDAVLVS 646 (806) T ss_pred ecCeEEEEEEEcCCcccEEEEEEEeecCCCCCCcccceeeeccccceEEEeccccccceeeeeeccccccccceeEEEEe Confidence 110111122110 001111000 00000 00000000000 00 00 0011111111 Q ss_pred CCC------ceEEEeee-----cCCchhhccccCC-cccchhHhhhhhccccccceeeeecceEEEEEeeecceeEeccc Q lcl|Aclame:pro 607 SSP------MRISFGGY-----TDEEFVDWKSVDG-IGVDAPAYLLTGYLAGGDYQREKFVPYITFHFKKTEDGFVEDAE 674 (771) Q Consensus 607 g~~------~~~sF~~~-----~~d~F~Dw~~~~~-~gvd~~sy~~tgy~~~gd~~r~K~~pyl~~~~~~TEd~~t~d~~ 674 (771) |.. ..+.+-+= -.-+..||....= +|-.|.+.+.. +..+++...++....+. T Consensus 647 g~~~~~g~~~~~~~~~~~~~v~~~~~~~~~~~~~v~vGl~Y~s~~~~----------------t~p~~~~~~~~~~~~~r 710 (806) T protein:vir:10 647 GWAGYVGGAFQFSYNASNNTISTNFDLAEGNTATIVVGETYWYEVEP----------------TPPLIKDSKDRVSYLDT 710 (806) T ss_pred eccccCCceEEEEEcCccceEeeeeeecCCCCcEEEEeeeeeEEEEE----------------CCeeEeccCCCcccccc Confidence 111 01110000 0001112211000 22333333221 01122222111111110 Q ss_pred ceEEEcCccceEEEEEEeeccCCCCC-cc----cchheeeee--eehcccCCCCc--CCCCcceeeeeccccceeeeEEE Q lcl|Aclame:pro 675 GDWTPTNQSSCMVQSQWSWTNSPASN-KW----GRTWQAYRF--RRHFFPDNIDN--QFDDGNSVVETKSRLRGSGKVLS 745 (771) Q Consensus 675 g~~~~~n~SScl~~~~w~~s~~~~~~-kw----~~~~q~Yr~--~r~~~p~~~~~--~f~~~~~VV~TK~~~RG~G~~~~ 745 (771) . =+-++..++.+++.-. +. ...+..|.. ++...|+...+ ....+ ++ +-.++|..+-.+ T Consensus 711 ~---------~l~r~~~~~~~s~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~tg--~~--~vp~~~~~~~~~ 777 (806) T protein:vir:10 711 P---------TVGNVYLNLDMYPDFSVVVTDKETLQERTVYLANKTAGSITNVIGYIAPHEG--TL--RIPLRRKSTDVS 777 (806) T ss_pred E---------EEEEEEEEeecceeeEEEEcccCCCcceeeeccCcccccccccccccccccc--eE--EEEeeecCceeE Confidence 0 0112222222221100 00 011133321 11222333222 11222 11 224689999999 Q ss_pred EEEEecCCCceEEEeEEEEEEeecCC Q lcl|Aclame:pro 746 LYITTEPKKNLHIYGWSMLVDVNGTV 771 (771) Q Consensus 746 ~~f~se~~KD~~llG~~~~~~~~g~~ 771 (771) ++++++.--.|+||+.+.+.+.+=+= T Consensus 778 v~i~~d~P~P~tvlai~~eg~y~~r~ 803 (806) T protein:vir:10 778 FKIRSKSPATFQLRDIEWTGSYNPRK 803 (806) T ss_pred EEEEECCCCceEEEEEEEEEEeeccc Confidence 99999999999999988776655443 No 30 >protein:vir:3529 Length: 477 # NCBI annotation: P28 # Family: family:all:1540 # MgeID: mge:72 # MgeName: APSE-1 # Cross-refs: genbank:acc:NP_050989;genbank:gi:9633575;genbank:GeneID:1262322 Probab=98.86 E-value=2.6e-08 Score=62.18 Aligned_cols=417 Identities=15% Similarity=0.114 Sum_probs=195.7 Q ss_pred ccCchhheeeeeccccceeeeeccCCCCcceEEEccccccCCc--Ccchhe-----eecc-ccccCCCcccccccchhhh Q lcl|Aclame:pro 192 VQTNAHIYNLRNQTFGVPRVTWHSNEPSDPIVTFRSAASGKFP--SNSDSV-----NLAL-SKRADVEPSTTDRFRAEDI 263 (771) Q Consensus 192 tlS~eh~YnL~NqgW~~~~~~~~s~s~~~~vv~~~~~~~G~yP--SnaD~~-----n~~~-~~~s~~e~~~~~~F~~~~~ 263 (771) -|| +-==++++ -+-++|.++ +++|-. |+.- .+++..+.+-+--| |- + T Consensus 1 ~~~----------------------~~~m~~~~-ipl~~g~~~~~~~~d~~~~~PVN~~a~p~~~~~s~~~L~~~-pG-~ 55 (477) T protein:vir:35 1 MLS----------------------EVFMPKIQ-IPLAKGLVKDIKTADYIDALPVNMLATPKEVLNASGYLRSF-PG-I 55 (477) T ss_pred Ccc----------------------cceeeeec-cccccccccccccccceeeeeeccceeeccccccccccccC-Cc-c Confidence 111 01111222 111234444 333321 2111 11111111111111 11 1 Q ss_pred hccccccccCCCcc-eEE--EeeecCcccceeeeecccccccccceeeec-chhhccCCce--eeeeeccee-EEeeecc Q lcl|Aclame:pro 264 VLNPIGTYETARGF-FII--DAMARGKSRLEEIVKLKQRYPSLSFGVSSL-PQDETPGGAS--VVCEYAGRV-WYAGFSG 336 (771) Q Consensus 264 ~~n~~Gs~~aarG~-yI~--d~~~~~~s~~~~~~~~~~~~p~~~~~t~~~-p~d~~~g~~t--~v~~~aGRv-~y~g~~~ 336 (771) .+-..| ..+.||- |.. .++++-.-.. |++-- +.-+...|+ |---+.++-+ +++.-+-++ .|-+++. T Consensus 56 ~~~~~~-~G~~RG~~~~~~~g~lY~V~G~~-----LY~v~-~~vG~I~gsg~VsMa~n~~~~aIv~~g~~~gy~y~~t~~ 128 (477) T protein:vir:35 56 EKKQDA-KGVSRGVHFNTKNNALYRVCGNT-----LYRND-KEVADIAGMSRVSMSHSSHSQAICFEGKVKLYRYDGTEK 128 (477) T ss_pred eeeccC-CccccceeEeecCCeEEEEecCe-----eEeee-eeeeeecccccEEEeeCCcEEEEEECCcceeEEEecccc Confidence 111123 3455664 221 2222221111 11100 011222222 2111111111 111111122 3444444 Q ss_pred eeeccccc-CC-----------cccce----------eEEEeeecchhhccccccCCCCcCchhhhhhhcCCCEEeecCC Q lcl|Aclame:pro 337 QIIDGDDQ-SP-----------RLVSY----------ILFSQLVDSPADIVNCYQDGDPTSTEEPELVDTDGGFIRIEGA 394 (771) Q Consensus 337 ~~~~~~~~-~p-----------~~~~y----------v~fSqli~s~~~lg~CyQ~~DPts~~~~dl~dtDGG~I~I~ga 394 (771) +.....+. =| .+.|| +|+|.|.|-.. +-.-||.. +.--+.| T Consensus 129 ~~~~~~~~~~p~~~l~~~~~v~f~dGyfV~~~~gt~~~~iS~L~d~s~-----~d~~~~Fa---sAE~~pD--------- 191 (477) T protein:vir:35 129 ALSNWPKDKYPQYDLGEVIDVCRNRGRYIWLQKGGERFGVTDLEDESK-----PDRYQPFY---RAESQPD--------- 191 (477) T ss_pred eeeecCccccCCccccceeEEEeeCceEEEeecCCCeEEEeecCCccc-----cccccccc---cccCCCC--------- Confidence 43333211 11 22333 34454432211 00111111 1111235 Q ss_pred CceeEEEeecceeEEEecceE--EEEEecccceeeecceeeeeee-----eeeecCccceEEeCCeEEEEecCceEEecc Q lcl|Aclame:pro 395 HDIINLVNVGSAVMVVAANGI--WMIQGGSDYGFTATNYLVTKIS-----EHGCSSPNSVVVVDNSFMYWGDDGIYHLTR 467 (771) Q Consensus 395 ~~Iv~mv~~~ssLlVft~nGV--Wal~G~S~~~fsAt~y~V~KIS-----d~GcvspnSIV~id~aVvYwSDsGI~~L~~ 467 (771) .|+++..+...|++|.+.-+ |.+.|+++. .|+..+++ ..||.+|.||...||+++|++...-..... T Consensus 192 -~Ivgi~~~~~~i~lfG~~TiEvw~ntG~a~f-----~~p~~r~~~~~mIq~Gcaa~~sv~~~~~t~~~l~~d~~g~~~V 265 (477) T protein:vir:35 192 -GIVSVDAWRDLIVCFGSSSIEYFTLTGSADT-----SQPLYIHQAAYMIQAGIAGRDCKCRYQDKYAILSHQSTGQPAV 265 (477) T ss_pred -ceEEEEeeccEEEEEeccceEEEEecCCCCC-----CcceeecCCceeeeecccCchhhhhhCceEEEEecCCCcccEE Confidence 89999999999999999998 999999887 44555553 679999999999999999999998777777 Q ss_pred cccCcccccccCchhhhhhhhhcChhHhcceeEEEEeeccE--EEEEecccccccccccceeEEecccccceeeeecc-- Q lcl|Aclame:pro 468 NQYGDYVANNLTEKTIQKYYEKIPSDAILNATGFYDSYDKK--VKWLYNTVLDGRTEPVTELVFDLALGAFYPSKIGS-- 543 (771) Q Consensus 468 ne~g~~ss~nLte~tIqt~~~sip~~~k~~~~g~yD~~~~~--v~wly~e~~d~~~~y~tElVf~L~~~afY~~ki~s-- 543 (771) ...+..+++-++-..|+..+++++.+....|.+.+=.++.. +.+-+| + + -+|||.+++-|+.. |+ T Consensus 266 ~~~~g~q~~rIST~aIE~~i~ay~~~e~a~af~~t~~~eGH~fy~LtfP---~-~-----Tw~yD~at~~w~e~--W~~~ 334 (477) T protein:vir:35 266 YLIGAGEKNKISTATIDKIIRYYSADELAASFMESIRFDNHELLLLHLP---K-H-----TLCFDGSASHQYSQ--WSLL 334 (477) T ss_pred EEccCceeEEecCHHHHHHHHhcCCcchhceeEEEEEeCCeeEEEEEcC---C-c-----eEEEecccccccce--eeee Confidence 77777889999888999999999999999998666456555 334444 1 2 37999999999853 33 Q ss_pred eeccceeeeeeeeeeCCceeeecceEEeecccceeeccceeeeeeeeeeeeeeeeEEEEEEEcCCCceEEEeeecCCchh Q lcl|Aclame:pro 544 LTAGRLPIPVGSVKIPPYKLVETGEEVTVASEQVTATGELVTVKVSTRSPVIRETKYIIVEKLSSPMRISFGGYTDEEFV 623 (771) Q Consensus 544 ~~ags~~~~i~s~~vp~y~~~~t~~~V~v~~~~vv~~~~~v~~~~~~~~~~~r~~~y~~~~~~g~~~~~sF~~~~~d~F~ 623 (771) .+....-..-+..+++. ... ..+|..+. |.-+++.|..|++ T Consensus 335 ~~g~~~~~~Ra~~~~~~-----~g~---------------~~vGD~~n---------------g~l~~ld~~~~~d---- 375 (477) T protein:vir:35 335 KSGFYDEPYRAIDFMFF-----DNQ---------------ITVGDKKE---------------GVLGHLIFNASNQ---- 375 (477) T ss_pred ccCCccCceEEEEEEEe-----CCe---------------EEEEEcCC---------------CeEEEECCCCccc---- Confidence 12212111222222222 222 33444443 3333333333332 Q ss_pred hccccCCcccchhHhhhhhccccccceeeeecceEEEEEe-------eecceeEecccceEEEcCccceEEEEEEeeccC Q lcl|Aclame:pro 624 DWKSVDGIGVDAPAYLLTGYLAGGDYQREKFVPYITFHFK-------KTEDGFVEDAEGDWTPTNQSSCMVQSQWSWTNS 696 (771) Q Consensus 624 Dw~~~~~~gvd~~sy~~tgy~~~gd~~r~K~~pyl~~~~~-------~TEd~~t~d~~g~~~~~n~SScl~~~~w~~s~~ 696 (771) . +.-+.|.--.|+++..=+ --|.|+-+++| . +--+||.+ T Consensus 376 -~--------------------g~~i~~~~~~p~~~~d~~Rv~~~el~~~tGvgq~~d-----------~--v~L~~sdd 421 (477) T protein:vir:35 376 -Y--------------------EQQTEHLLYTPMIKADNARLFDFELEASTGVAQIAD-----------K--LFLSVTTD 421 (477) T ss_pred -C--------------------CCccceEEecceeeCCCCeEEEEEEEEecCcCccCc-----------e--EEEEEecc Confidence 1 112222233444432211 11122222222 1 44567776 Q ss_pred CCCCcccchheeeeeeehcccCCCCcCCCCcceeeeeccccceeeeEE-----EEEEEecCCCceEEEeEEEE Q lcl|Aclame:pro 697 PASNKWGRTWQAYRFRRHFFPDNIDNQFDDGNSVVETKSRLRGSGKVL-----SLYITTEPKKNLHIYGWSML 764 (771) Q Consensus 697 ~~~~kw~~~~q~Yr~~r~~~p~~~~~~f~~~~~VV~TK~~~RG~G~~~-----~~~f~se~~KD~~llG~~~~ 764 (771) +.-|++++++ +.+-.+.+ .|+.+.|-=|+|- +||+.+-..--+-+++=-|+ T Consensus 422 --G~~~~~~~~~--------~~g~~g~~-------~~r~~~~RlG~~r~~vgf~~r~~~~~pv~l~~~~~~~e 477 (477) T protein:vir:35 422 --GINYSREQLI--------EQNSPFQY-------DKRILWRRIGRVRKNIGFKIRIITKSPVTLSDLSIRME 477 (477) T ss_pred --ccccccceee--------cCCCcccc-------ccceeeeeeeeceeccceEEEEEecCCceeccceeEeC Confidence 4459998876 33333332 2555555555544 34444444444444444444 No 31 >protein:vir:105428 Length: 472 # NCBI annotation: gene 8 protein # Family: family:all:1540 # MgeID: mge:1556 # MgeName: Sf6 # Cross-refs: genbank:acc:NP_958184;genbank:gi:41057286;genbank:GeneID:2716675 Probab=98.83 E-value=3.2e-08 Score=61.64 Aligned_cols=401 Identities=15% Similarity=0.145 Sum_probs=180.6 Q ss_pred ceeeeeccCC-------CCcceEEEccccccCCcCcchheeeccccccCCCcccccccchhhhhccccccccCCCcc-eE Q lcl|Aclame:pro 208 VPRVTWHSNE-------PSDPIVTFRSAASGKFPSNSDSVNLALSKRADVEPSTTDRFRAEDIVLNPIGTYETARGF-FI 279 (771) Q Consensus 208 ~~~~~~~s~s-------~~~~vv~~~~~~~G~yPSnaD~~n~~~~~~s~~e~~~~~~F~~~~~~~n~~Gs~~aarG~-yI 279 (771) -|++-...-+ .+|.+-+ =-||+...+...+..+..=+=.|-.-++-++ ..++||- |. T Consensus 1 m~~~~~pl~~G~~~~~~~~d~~~~-------------~pVN~~a~~~~~~~s~~~l~~tPGl~~~a~v--~G~~RG~~~~ 65 (472) T protein:vir:10 1 MPIQQLPLMKGVGKDFRNADYIDY-------------LPVNMLATPKEILNSSGYLRSFPGIAKRSDV--NGVSRGVEYN 65 (472) T ss_pred CCeeeeeeccCceeeccccchhhe-------------eeeeeeeeccCCCcccceeecCCCceeeccC--CccccceEEE Confidence 2222121111 1111111 1133333221111111111111222222122 2334552 21 Q ss_pred -E---------EeeecCcc------------------cceeeeeccc---ccccccceeeecchhhc-----cCCceeee Q lcl|Aclame:pro 280 -I---------DAMARGKS------------------RLEEIVKLKQ---RYPSLSFGVSSLPQDET-----PGGASVVC 323 (771) Q Consensus 280 -~---------d~~~~~~s------------------~~~~~~~~~~---~~p~~~~~t~~~p~d~~-----~g~~t~v~ 323 (771) . .+.++..+ .+.=++.+.. .|-.-.-+....|.|.. .+...-|| T Consensus 66 ~~~g~lY~V~G~~LY~v~~~iGsiag~grVsMa~n~~~~av~~~g~~~~Y~yd~~v~t~~~~~~d~~~p~~dlg~~~dv~ 145 (472) T protein:vir:10 66 MAQNAVYRVCGGKLYKGESEVGDVAGSGRVSMAHGRTSQAVGVNGQLVEYRYDGTVKTVSNWPTDSGFTQYELGSVRDIT 145 (472) T ss_pred eeCCeEEEEecceEeeeecceecccCcccEEEecCCcEEEEEECCceeEEEeeccchhhhccccccccccccccceeeee Confidence 1 11122111 1100011000 00000000001111110 11111222 Q ss_pred eecceeEEeeecceeecccccCCcccceeEEEeeecchhhccccccCCCC--cCchhhhhhhcCCCEEeecCCCceeEEE Q lcl|Aclame:pro 324 EYAGRVWYAGFSGQIIDGDDQSPRLVSYILFSQLVDSPADIVNCYQDGDP--TSTEEPELVDTDGGFIRIEGAHDIINLV 401 (771) Q Consensus 324 ~~aGRv~y~g~~~~~~~~~~~~p~~~~yv~fSqli~s~~~lg~CyQ~~DP--ts~~~~dl~dtDGG~I~I~ga~~Iv~mv 401 (771) =..||... . ++|- .+.|+|.|-+...-. +.++ +.|. +.| .|+++. T Consensus 146 f~dGyfV~-~-----~~Gt-------~~~~is~l~d~~~~~-----~y~~fa~AE~-----~pD----------~Ivgi~ 192 (472) T protein:vir:10 146 RLRGRYAW-S-----KDGT-------DSWFITDLEDESHPD-----RYSAQYRAES-----QPD----------GIIGIG 192 (472) T ss_pred eecceEEE-e-----ccCc-------ceEEEeccCCccccc-----cccccccccC-----CCC----------ceEEEE Confidence 22233111 0 0000 024444443322100 1122 2232 345 899999 Q ss_pred eecceeEEEecceE--EEEEecccceeeecceeeeeee----eeeecCccceEEeCCeEEEEecCceEEecccccCcccc Q lcl|Aclame:pro 402 NVGSAVMVVAANGI--WMIQGGSDYGFTATNYLVTKIS----EHGCSSPNSVVVVDNSFMYWGDDGIYHLTRNQYGDYVA 475 (771) Q Consensus 402 ~~~ssLlVft~nGV--Wal~G~S~~~fsAt~y~V~KIS----d~GcvspnSIV~id~aVvYwSDsGI~~L~~ne~g~~ss 475 (771) .+...|++|.+.-+ |.+.|++++ +.|+.++.+ ..||.+|.||...|++++|+|..--........+..++ T Consensus 193 ~~~~~i~lfG~~TiEvw~ntG~a~~----~~fpy~r~~g~~iq~Gcaa~~sv~~~~~t~~~l~~d~~g~~~V~~~~g~~~ 268 (472) T protein:vir:10 193 TWRDFIVCFGSSTIEYFSLTGATTA----GAALYVAQPSLMVQKGIAGTYCKTPFADSYAFISNPATGAPSVYIIGSGQV 268 (472) T ss_pred eeccEEEEEeccceEEEEecCCCCc----ccCceeecccceeeecccCcchhhecCceEEEEecCCccccEEEEccCcee Confidence 99999999999998 999997774 235555555 58999999999999999999998655556666666788 Q ss_pred cccCchhhhhhhhhcChhHhcceeEEEEeeccE--EEEEecccccccccccceeEEecccccceeeeeccee-cc-ce-e Q lcl|Aclame:pro 476 NNLTEKTIQKYYEKIPSDAILNATGFYDSYDKK--VKWLYNTVLDGRTEPVTELVFDLALGAFYPSKIGSLT-AG-RL-P 550 (771) Q Consensus 476 ~nLte~tIqt~~~sip~~~k~~~~g~yD~~~~~--v~wly~e~~d~~~~y~tElVf~L~~~afY~~ki~s~~-ag-s~-~ 550 (771) +-++-..|+..+++++.+.+..+.+++=.++.. +.+.+| + . -+|||+.++-|+.. |+.. .| .. + T Consensus 269 ~rIST~aIE~~i~~y~~~e~~dA~~~t~~~~GH~fy~LtfP---~-~-----Tw~yD~~t~~Wher--w~~~~~g~~~~~ 337 (472) T protein:vir:10 269 SPIASASIEKILRSYTADELADGVMESLRFDAHELLIIHLP---R-H-----VLVYDASSSANGPQ--WCVLKTGLYDDV 337 (472) T ss_pred EEecCHHHHHHHHhcCCccccceeEEEEEeCCeEEEEEEcC---C-c-----eeEeecccccCcee--eeeecCCCccCc Confidence 888888899999999877777778776566666 334444 1 2 38999999999994 3322 11 11 1 Q ss_pred eeeeeeeeCCceeeecceEEeecccceeeccceeeeeeeeeeeeeeeeEEEEEEEcCCCceEEEeeecCCchhhccccCC Q lcl|Aclame:pro 551 IPVGSVKIPPYKLVETGEEVTVASEQVTATGELVTVKVSTRSPVIRETKYIIVEKLSSPMRISFGGYTDEEFVDWKSVDG 630 (771) Q Consensus 551 ~~i~s~~vp~y~~~~t~~~V~v~~~~vv~~~~~v~~~~~~~~~~~r~~~y~~~~~~g~~~~~sF~~~~~d~F~Dw~~~~~ 630 (771) + .+..+++. ... ..+|..+. |.-.++.|..|+++ |. T Consensus 338 ~-Ra~~~~~~-----~g~---------------~~vGD~~n---------------g~ly~l~~~~~td~-----G~--- 373 (472) T protein:vir:10 338 Y-RAIDFIYE-----GNQ---------------ITCGDKLE---------------SVTGKLQFDISSQY-----GL--- 373 (472) T ss_pred e-EEEEEEEe-----CCe---------------EEEEEcCC---------------CeEEEEcccCcCcC-----CC--- Confidence 1 22222222 122 33444444 33444444444442 11 Q ss_pred cccchhHhhhhhccccccceeeeecceEEEE-------EeeecceeEecccceEEEcCccceEEEEEEeecc--CCCCCc Q lcl|Aclame:pro 631 IGVDAPAYLLTGYLAGGDYQREKFVPYITFH-------FKKTEDGFVEDAEGDWTPTNQSSCMVQSQWSWTN--SPASNK 701 (771) Q Consensus 631 ~gvd~~sy~~tgy~~~gd~~r~K~~pyl~~~-------~~~TEd~~t~d~~g~~~~~n~SScl~~~~w~~s~--~~~~~k 701 (771) -+.|.--.|+++.. =.-++.|+.+++|- |+-.+| |+ +-..-. T Consensus 374 -----------------~i~~~~~~p~~~~d~~Rv~d~~ve~~~G~~~~adp----------~~~~~~--sDg~~~g~~~ 424 (472) T protein:vir:10 374 -----------------QQEHLLFTPLFKADNARCFDLEVESSTGVAQYADR----------LFLSAT--TDGINYGREQ 424 (472) T ss_pred -----------------cceEEEeccceeCCCCeEEEEEEEeecCCCcccCc----------eEEEec--cCCcccchhh Confidence 11122223333311 11344444333332 343554 44 222222 Q ss_pred ccchheeeeeeehcccCCCCcCCCCcceeeeeccccceee----eE-EEEEEEecCCCceEEEeEEEEEE Q lcl|Aclame:pro 702 WGRTWQAYRFRRHFFPDNIDNQFDDGNSVVETKSRLRGSG----KV-LSLYITTEPKKNLHIYGWSMLVD 766 (771) Q Consensus 702 w~~~~q~Yr~~r~~~p~~~~~~f~~~~~VV~TK~~~RG~G----~~-~~~~f~se~~KD~~llG~~~~~~ 766 (771) |..+.+.-||+ |+.+.|-=| ++ +++|+.+--.-+ |+|=.+-+- T Consensus 425 ~~~~~~~g~~~--------------------~R~~~~RlG~~r~~vgf~~r~~~~~~v~--l~ga~~~~e 472 (472) T protein:vir:10 425 MIEQNEPFVYD--------------------KRVLWKRVGRIRKNVGFKLRVITKSPVT--LSGAQIRIE 472 (472) T ss_pred hhhhccCcccc--------------------cceeeeeeeeccccceEEEEEEeccccc--eeeeeEEeC Confidence 23333333333 334444334 22 455554433333 777655444 No 32 >protein:vir:177 Length: 472 # NCBI annotation: DNA stabilization protein # Family: family:all:1540 # MgeID: mge:5 # MgeName: HK620 # Cross-refs: genbank:acc:NP_112082;genbank:gi:13559872;genbank:GeneID:920982 Probab=98.82 E-value=3.7e-08 Score=61.32 Aligned_cols=403 Identities=14% Similarity=0.144 Sum_probs=183.7 Q ss_pred ceeeeeccCC-------CCcceEEEccccccCCcCcchheeeccccccCCCcccccccchhhhhccccccccCCCcc-eE Q lcl|Aclame:pro 208 VPRVTWHSNE-------PSDPIVTFRSAASGKFPSNSDSVNLALSKRADVEPSTTDRFRAEDIVLNPIGTYETARGF-FI 279 (771) Q Consensus 208 ~~~~~~~s~s-------~~~~vv~~~~~~~G~yPSnaD~~n~~~~~~s~~e~~~~~~F~~~~~~~n~~Gs~~aarG~-yI 279 (771) -|++-...-+ .+|.+-+ =-||+...+...+..+..=+=.|-.-++-++ ..++||- |. T Consensus 1 m~~~~~Pl~~G~~~~~~~~d~~~~-------------~pVN~~a~~~~~~~s~~~l~~tPGl~~~a~v--~G~~RG~~~~ 65 (472) T protein:vir:17 1 MPIQQLPLMKGVGKDFRNADYIDY-------------LPVNMLATPKEILNSSGYLRSFPGIAKRSDV--NGVSRGVEYN 65 (472) T ss_pred CCeeeeeeccCceeeccccchhhe-------------eeeeeeeeccCCCcccceeecCCCceeeccC--CccccceEEE Confidence 2222221111 1111111 1133333221111111111111222222122 2334552 21 Q ss_pred -E---------EeeecCcc------------------cceeeeeccc---ccccccceeeecchhhc-----cCCceeee Q lcl|Aclame:pro 280 -I---------DAMARGKS------------------RLEEIVKLKQ---RYPSLSFGVSSLPQDET-----PGGASVVC 323 (771) Q Consensus 280 -~---------d~~~~~~s------------------~~~~~~~~~~---~~p~~~~~t~~~p~d~~-----~g~~t~v~ 323 (771) . .+.++..+ .+.=++.+.. .|-.-.-+....|.|.. .+...-|| T Consensus 66 ~~~g~lY~V~G~~LY~v~~~iGsiag~grVsMa~n~~~~av~~~g~~~~Y~y~~~v~t~~~~~~d~~~~~~dlg~~~dv~ 145 (472) T protein:vir:17 66 MAQNAVYRVCGGKLYKGESEVGDVAGSGRVSMAHGRTSQAVGVNGQLVEYRYDGTVKTVSNWPTDSGFTQYELGSVRDIT 145 (472) T ss_pred eeCCeEEEEecceEeeeecceecccCcccEEEecCCcEEEEEECCceeEEEeeccchhhhccccccccccccccceeeee Confidence 1 11122111 1111111000 00000000001111110 11111222 Q ss_pred eecceeEEeeecceeecccccCCcccceeEEEeeecchhhccccccCCCC--cCchhhhhhhcCCCEEeecCCCceeEEE Q lcl|Aclame:pro 324 EYAGRVWYAGFSGQIIDGDDQSPRLVSYILFSQLVDSPADIVNCYQDGDP--TSTEEPELVDTDGGFIRIEGAHDIINLV 401 (771) Q Consensus 324 ~~aGRv~y~g~~~~~~~~~~~~p~~~~yv~fSqli~s~~~lg~CyQ~~DP--ts~~~~dl~dtDGG~I~I~ga~~Iv~mv 401 (771) =..||... . ++|- .+.|+|.|-+...-. +.++ +.|. +.| .|+++. T Consensus 146 f~dGyfV~-~-----~~Gt-------~~~~is~l~d~~~~~-----~y~~fa~AE~-----~pD----------~Ivgi~ 192 (472) T protein:vir:17 146 RLRGRYAW-S-----KDGT-------DSWFITDLEDESHPD-----RYSAQYRAES-----QPD----------GIIGIG 192 (472) T ss_pred eecceEEE-e-----ccCc-------ceEEEeccCCccccc-----cccccccccC-----CCC----------ceEEEE Confidence 22233111 0 0000 024444443322100 1122 2232 345 899999 Q ss_pred eecceeEEEecceE--EEEEecccceeeecceeeeeee----eeeecCccceEEeCCeEEEEecCceEEecccccCcccc Q lcl|Aclame:pro 402 NVGSAVMVVAANGI--WMIQGGSDYGFTATNYLVTKIS----EHGCSSPNSVVVVDNSFMYWGDDGIYHLTRNQYGDYVA 475 (771) Q Consensus 402 ~~~ssLlVft~nGV--Wal~G~S~~~fsAt~y~V~KIS----d~GcvspnSIV~id~aVvYwSDsGI~~L~~ne~g~~ss 475 (771) .+...|++|.+.-+ |.+.|++++ ..|+.++.+ ..||.+|.||...|++++|++..--........+..++ T Consensus 193 ~~~~~i~lfG~~TiEvw~ntG~a~~----~~fpy~r~~g~~iq~Gcaa~~sv~~~~~t~~~l~~d~~g~~~V~~~~g~~~ 268 (472) T protein:vir:17 193 TWRDFIVCFGSSTIEYFSLTGATTV----GAALYVAQPSLMVQKGIAGTYCKTPFADSYAFISNPATGAPSVYIIGSGQV 268 (472) T ss_pred eeccEEEEEeccceEEEEeeCCCCC----CcCceeecCcceeeecccCcchhhecCceEEEEecCCccccEEEEccCcee Confidence 99999999999998 999998774 235555554 58999999999999999999998655555666666788 Q ss_pred cccCchhhhhhhhhcChhHhcceeEEEEeeccE--EEEEecccccccccccceeEEecccccceeeeeccee-cc-ce-e Q lcl|Aclame:pro 476 NNLTEKTIQKYYEKIPSDAILNATGFYDSYDKK--VKWLYNTVLDGRTEPVTELVFDLALGAFYPSKIGSLT-AG-RL-P 550 (771) Q Consensus 476 ~nLte~tIqt~~~sip~~~k~~~~g~yD~~~~~--v~wly~e~~d~~~~y~tElVf~L~~~afY~~ki~s~~-ag-s~-~ 550 (771) +-++-..|+..+++++.+.+..+.+++=.++.. +.+-+| + . -+|||+.++-|+.. |+.. .| .. + T Consensus 269 ~rIST~aIE~~i~~y~~~e~~dA~~~t~~~~GH~fy~LtfP---~-~-----Tw~yD~~t~~Wher--w~~~~~g~~~~~ 337 (472) T protein:vir:17 269 SPISSASIEKILRSYTADELADGVMESLRFDAHELLIIHLP---R-H-----VLVYDASSSANGPQ--WCVLKTGLYDDV 337 (472) T ss_pred EEecCHHHHHHHHhcCCccccceeEEEEEeCCeEEEEEEcC---C-c-----eeEeecccccCcee--eeeecCCCccCc Confidence 888888899999999877777778776566666 334444 1 2 38999999999994 3322 11 11 1 Q ss_pred eeeeeeeeCCceeeecceEEeecccceeeccceeeeeeeeeeeeeeeeEEEEEEEcCCCceEEEeeecCCchhhccccCC Q lcl|Aclame:pro 551 IPVGSVKIPPYKLVETGEEVTVASEQVTATGELVTVKVSTRSPVIRETKYIIVEKLSSPMRISFGGYTDEEFVDWKSVDG 630 (771) Q Consensus 551 ~~i~s~~vp~y~~~~t~~~V~v~~~~vv~~~~~v~~~~~~~~~~~r~~~y~~~~~~g~~~~~sF~~~~~d~F~Dw~~~~~ 630 (771) + .+..+++. ... ..+|..+. |.-.++.|..|++++=..+ T Consensus 338 ~-Ra~~~~~~-----~g~---------------~~vGD~~n---------------g~ly~ld~~~~td~g~pi~----- 376 (472) T protein:vir:17 338 Y-RAIDFIYE-----GNQ---------------ITCGDKLE---------------SVTGKLQFDISSQYDKQQE----- 376 (472) T ss_pred e-EEEEEEEe-----CCe---------------EEEEEcCC---------------CeEEEEcccCcCCCCceeE----- Confidence 1 22222222 222 34455444 4445555555555433333 Q ss_pred cccchhHhhhhhccccccceeeeecceEEEEE-------eeecceeEecccceEEEcCccceEEEEEEeecc--CCCCCc Q lcl|Aclame:pro 631 IGVDAPAYLLTGYLAGGDYQREKFVPYITFHF-------KKTEDGFVEDAEGDWTPTNQSSCMVQSQWSWTN--SPASNK 701 (771) Q Consensus 631 ~gvd~~sy~~tgy~~~gd~~r~K~~pyl~~~~-------~~TEd~~t~d~~g~~~~~n~SScl~~~~w~~s~--~~~~~k 701 (771) |.-.-|+++..= +-.+.|..++++ =|+-.+| |+ +-..-. T Consensus 377 --------------------~~~~~p~~~~~~~RV~d~el~~~tG~~~~ad----------p~~l~~~--sDg~~~g~~~ 424 (472) T protein:vir:17 377 --------------------HLLFTPLFKADNARVFDLEVESSTGVAQYAD----------RLFLSAT--TDGINYGREQ 424 (472) T ss_pred --------------------EEEecceeeCCCceEEEEEEeeeCCcccCCC----------ceEEEcc--cCCcccchhh Confidence 222222222211 122233333322 1444444 34 221122 Q ss_pred ccchheeeeeeehcccCCCCcCCCCcceeeeeccccceeeeE---EEEEEEecCCCceEEEeEEEEEE Q lcl|Aclame:pro 702 WGRTWQAYRFRRHFFPDNIDNQFDDGNSVVETKSRLRGSGKV---LSLYITTEPKKNLHIYGWSMLVD 766 (771) Q Consensus 702 w~~~~q~Yr~~r~~~p~~~~~~f~~~~~VV~TK~~~RG~G~~---~~~~f~se~~KD~~llG~~~~~~ 766 (771) |..+.+.-||+ |+.+.|-=|+| +.|||+=-..-+.-|+|=.+.+- T Consensus 425 ~~~~~~~g~~~--------------------~R~~~~RlG~~r~~v~f~~~~~~~~~~~l~~a~~~~e 472 (472) T protein:vir:17 425 MIEQNEPFVYD--------------------KRVLWKRVGRIRKNVGFKLRVITKSPVTLSGCQIRIE 472 (472) T ss_pred hhhhccCcccc--------------------cceeeeeeeeccccceEEEEEeecccceeeeeEEEeC Confidence 23333333332 34444444433 23555533444555777766555 No 33 >protein:vir:78703 Length: 905 # NCBI annotation: tail tube B # Family: family:all:825 # MgeID: mge:1856 # MgeName: Syn5 # Cross-refs: genbank:acc:YP_001285450;genbank:gi:148724484;genbank:GeneID:5220174 Probab=98.78 E-value=4.9e-08 Score=60.64 Aligned_cols=636 Identities=13% Similarity=0.078 Sum_probs=240.2 Q ss_pred Cchhhhhh----hhccccceeeeccchhcCC--CCccccceeeeeccccchhh-----hhcceeecCCceeecc--eeec Q lcl|Aclame:pro 1 MAKTTNAA----EFNTFVGGLITEASPLTFP--QNASIDEVNFILNRDGSRNR-----RNGMDFENGATKVVCN--TLVP 67 (771) Q Consensus 1 Ma~~~~~~----e~ntFv~GliTEan~Lt~P--~nas~De~N~~L~k~G~r~R-----R~Gl~~E~s~~~~l~~--~~~~ 67 (771) +......+ .+-+.-.--...++..--+ .=++++..++ +|..-. |+.+..+.++ ++.+ +.++ T Consensus 167 v~I~~~~~~~~~t~~~~~a~~~s~~s~~~~~~g~~~~~~~~~~----~~~t~~~~~~l~f~~~~~~~~--~~~~~~~~~~ 240 (905) T protein:vir:78 167 IDLDRDGASQQVKVYRAKALEISPGSFEVEDGGVCTEHDVQNY----TNQTIGSSTGLAFQVRVQCAA--YLENNEYRSR 240 (905) T ss_pred EEEeCCCCceeeeeeccccceeccccccccccccccccceeee----ecceeeccCCceeEEeecccc--ccCCCccccc Confidence 00000000 0000000000000000000 0111112222 121111 1111111110 0000 1111 Q ss_pred cCc--eeeeeechhhhccCccceeEEEEEEccEEEE--EecCCcee-eheeeEeeecc--ee------------------ Q lcl|Aclame:pro 68 ADG--TIAVTSHNWENAGGEVGRWISLVQVGTELKF--FQTTGETL-SEGNFYNYQFV--NM------------------ 122 (771) Q Consensus 68 s~~--~~~vt~~~W~~~~g~v~~~~l~~q~g~~l~~--~d~t~~~l-Sn~~l~~~~fv--~~------------------ 122 (771) ... .++.-...|+... -+-+.|.|....+ -.-..... .+..-..+.-. .. T Consensus 241 ~~~~~~l~~g~~~~~~~~-----~~~v~~~g~~y~i~i~~~~~~~~~~~~~~~~~~t~~d~~a~~~~~~~i~~~l~~~~~ 315 (905) T protein:vir:78 241 YNVSVVLQNGGTGFRKGD-----MITVNLNGRDYNIRVTQEEFVYTYASDGTAAHTTPQDSTAGTLDIGQITAGLVNSVN 315 (905) T ss_pred ccceeeeeccccccccCc-----cEEEeeccceEEEEEecceeEEEecCCCcccccCccCccCccccHHHHHHHHHHhhc Confidence 111 1122334565533 2224455533322 11100000 01100000000 00 Q ss_pred CCCcceeeEEeeEEEEEEcCCcceEEEeccCCceeeEEEEEEEEEeeeeccccccCcceeccccccCCCccCchhheeee Q lcl|Aclame:pro 123 SPSHKLSYAVVDGLLVVANGSRDIYVFEYDSGSVSVTTKRLLVRDLFGVQDIVNGVDLRQGNDIATRPTVQTNAHIYNLR 202 (771) Q Consensus 123 sP~~~is~~~v~G~lVva~~~~~~~i~~~~~~s~~~~t~~l~iRd~~~l~d~~~g~~~~~~~~~~~rpttlS~eh~YnL~ 202 (771) +..+ ..+..+-+.+.|-..+.+-+.+....+-.. ++.-.++.. ++ .++.|...+. T Consensus 316 ~~~~-~~~~~~g~~i~v~~~~~~~~~~~~~~g~~~--~~~~~~~~~--v~----------------~~~~Lp~~~~---- 370 (905) T protein:vir:78 316 LISN-YSAQAVGNVIEIERTDGRDFNLGVRGGATN--RAMTAIKGT--AN----------------SIVDLPGQCF---- 370 (905) T ss_pred cccc-EEEEecCcEEEEEecCCCccEEEEeccCCc--ceEEEEecc--cc----------------ccccCccccC---- Confidence 0011 233344455555444443212211111111 111112111 12 1233332221 Q ss_pred eccccceeeeeccCCCCcceEEEccccccCCcCcchheeeccccccCCCccc---ccccc----hhhhhccccccccCCC Q lcl|Aclame:pro 203 NQTFGVPRVTWHSNEPSDPIVTFRSAASGKFPSNSDSVNLALSKRADVEPST---TDRFR----AEDIVLNPIGTYETAR 275 (771) Q Consensus 203 NqgW~~~~~~~~s~s~~~~vv~~~~~~~G~yPSnaD~~n~~~~~~s~~e~~~---~~~F~----~~~~~~n~~Gs~~aar 275 (771) | |--+-.....+++-..+.++|..+..+.+-++ .| .|-.. ...|+ |+.|... +. T Consensus 371 ~-g~~v~v~~~~~~~~d~yyv~~~~~~~~~~~~~--~W---------~E~~~~~~~~~~~~~tmp~~l~r~-------~~ 431 (905) T protein:vir:78 371 D-GFELKVINTENAESDDYYVVFRSAAEGIPGSG--SW---------EETVAPGIERGFNTSTMPHALIRQ-------AD 431 (905) T ss_pred C-CcEEEEEeCCCCCcceEEEEEEecccCCcCce--eE---------EEecccccccccccccccEEEEEe-------cC Confidence 1 21111122223333445577766643443222 23 22111 11122 2333333 33 Q ss_pred cceEEEeeecCcccce----eeeecccccccccceeeecchhhccCCceeeeeecceeEEeeecceeecccccCCcccce Q lcl|Aclame:pro 276 GFFIIDAMARGKSRLE----EIVKLKQRYPSLSFGVSSLPQDETPGGASVVCEYAGRVWYAGFSGQIIDGDDQSPRLVSY 351 (771) Q Consensus 276 G~yI~d~~~~~~s~~~----~~~~~~~~~p~~~~~t~~~p~d~~~g~~t~v~~~aGRv~y~g~~~~~~~~~~~~p~~~~y 351 (771) |.|.+.....+..... +.+-. .+-|.+++ .-+.|++|+=|-+|+++++ |. + T Consensus 432 g~f~~~~~~~~~~~~~~~~r~~Gd~-~Tnp~psf---------~g~~is~v~f~q~RL~f~s------------~~---~ 486 (905) T protein:vir:78 432 GNFTLEALNDEGTITGWAQREVGDD-DTNPKPSF---------VGRGISDMFFYNNRLGFLS------------ED---A 486 (905) T ss_pred ceEEEEEeccccccccccccccCCc-ccCCCCcc---------cCCCcceEEEEcceEEEec------------CC---e Confidence 4444444432211000 01110 11122122 2256899999999999876 22 5 Q ss_pred eEEEeeecchhhccccccCCCCcCchhhhhhhcCCCEEeecC--CCceeEEEeecceeEEEecceEEEEEecccceeeec Q lcl|Aclame:pro 352 ILFSQLVDSPADIVNCYQDGDPTSTEEPELVDTDGGFIRIEG--AHDIINLVNVGSAVMVVAANGIWMIQGGSDYGFTAT 429 (771) Q Consensus 352 v~fSqli~s~~~lg~CyQ~~DPts~~~~dl~dtDGG~I~I~g--a~~Iv~mv~~~ssLlVft~nGVWal~G~S~~~fsAt 429 (771) |++||.=| |.+=.|.+. ..+.|+|--.+.+-+ ...|.+|+++++.|+|||..+-|.|.|++ ..++.+ T Consensus 487 v~~Srtgd--------~~nF~~~t~--~~~~DdDpI~~~~ss~~~~~i~~~v~~~~~L~ifT~g~ef~lsg~~-~~lTP~ 555 (905) T protein:vir:78 487 VIMSQPGD--------YFNFFVTSA--ITISDSDPIDVTASSTKPAILRAAIGAPKGLILFAENSQFLLASQE-VVFSTA 555 (905) T ss_pred EEEEccCC--------ccccccccc--cCCCCCccEEEEEcCCcceeeEEEeecCCcEEEEecCceEEEecCC-ccccce Confidence 88887522 223345433 255677766665543 45788999999999999999999998754 479999 Q ss_pred ceeeeeeeeeeecCccceEEeCCeEEEEecCc----eEEecccc-cCcccccccCchhhhhhhhhcChhHhcceeEEEEe Q lcl|Aclame:pro 430 NYLVTKISEHGCSSPNSVVVVDNSFMYWGDDG----IYHLTRNQ-YGDYVANNLTEKTIQKYYEKIPSDAILNATGFYDS 504 (771) Q Consensus 430 ~y~V~KISd~GcvspnSIV~id~aVvYwSDsG----I~~L~~ne-~g~~ss~nLte~tIqt~~~sip~~~k~~~~g~yD~ 504 (771) +..|.++|..+|.+-=.=+.++++++|.+.+| |+.+..+. ..-..+++||.. ++.|..+ .....+.. T Consensus 556 s~~i~~~S~~~~~~~v~Pv~vG~~vlFv~~~g~~s~vre~~y~~~~d~y~a~DlT~~-a~hl~~g-------~v~~~~~s 627 (905) T protein:vir:78 556 TIKLTEISDYFYRSLAKPVSTGVSIAFVSEADTYSKIFEMSIDSVDNRPQVADITRI-VPEYVPT-------GLTWSVST 627 (905) T ss_pred eEEEEeEEeecccCCCCcEEeCCeEEEeecCCCeeEEEEEEeeecccceehhHHHHH-HHHhcCC-------ceEEEEec Confidence 99999999999865333378999999999987 87787774 344667777765 4444432 22222333 Q ss_pred eccEEEEEecccccccccccceeEE---ecccccceeeeecceeccceeeeeeeeeeCCceeeecc---eEE----ee-- Q lcl|Aclame:pro 505 YDKKVKWLYNTVLDGRTEPVTELVF---DLALGAFYPSKIGSLTAGRLPIPVGSVKIPPYKLVETG---EEV----TV-- 572 (771) Q Consensus 505 ~~~~v~wly~e~~d~~~~y~tElVf---~L~~~afY~~ki~s~~ags~~~~i~s~~vp~y~~~~t~---~~V----~v-- 572 (771) -+.-+.|+-. +-+.-+.|+ ++. +..-.||.+|.+ +|.... +..+-=-.|.++... ..+ .. T Consensus 628 ~~~~~v~~~~-~~~~l~~yt--yl~~~~eq~v~AWsrw~~----~G~~~~-~a~i~d~~~~vV~r~~~G~~~~~~~~l~~ 699 (905) T protein:vir:78 628 PNNSMMLFGD-NSNTAYIFK--FFNQGNERQVAGWSKWIL----PGEQRM-CGFFADTGYFVLYDSTTGSYVLSAMELLD 699 (905) T ss_pred CCCcEEEEEc-CCCeEEEEE--eecCCCceeEEeEEEEec----CCCeEE-EEEEcCCEEEEEEEccCCeEEEEEEeecc Confidence 3333444432 111111111 111 223459999966 332221 111100111221110 000 00 Q ss_pred cccc-eeecc------ce-----------eeeeeeeeee------eeeeeEEEEEEEcCCCceEEEeeecCCchhhcccc Q lcl|Aclame:pro 573 ASEQ-VTATG------EL-----------VTVKVSTRSP------VIRETKYIIVEKLSSPMRISFGGYTDEEFVDWKSV 628 (771) Q Consensus 573 ~~~~-vv~~~------~~-----------v~~~~~~~~~------~~r~~~y~~~~~~g~~~~~sF~~~~~d~F~Dw~~~ 628 (771) ..+. .+... ++ ++.+..+... ..-..+-..+..+|... ..+.+.+-..|.. T Consensus 700 ~~~~~~~d~~~~~~~~~~d~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dG~~~----~~~~~~~~~~~~~- 774 (905) T protein:vir:78 700 DPDSASIDTAFSSFLPRLDNYVVKSDLTVVDNGDGTLTVDLEAGQAMTGATPVIMFTDGPSE----FAFSQPTITAGQF- 774 (905) T ss_pred ccCccccccceeeeeeccceeeecccceecccCcceEeeeccCccccccceeEEEeeCCcee----eeEEEEEeeceee- Confidence 0000 00000 00 0000000000 00000111111222210 0111111122221 Q ss_pred CCcccchhHhhhhhccccccceeeeecceEEEEEeeecceeEecccceEEEcCccceEEEEEEeeccCC-----CCCccc Q lcl|Aclame:pro 629 DGIGVDAPAYLLTGYLAGGDYQREKFVPYITFHFKKTEDGFVEDAEGDWTPTNQSSCMVQSQWSWTNSP-----ASNKWG 703 (771) Q Consensus 629 ~~~gvd~~sy~~tgy~~~gd~~r~K~~pyl~~~~~~TEd~~t~d~~g~~~~~n~SScl~~~~w~~s~~~-----~~~kw~ 703 (771) .+++.+=+.-|+.+.-.++ . +.+.++ .+++-...+.- + =+.|.++..| +... ++++ T Consensus 775 ---t~~~a~~v~VGl~Y~s~v~---~---~p~~~~-~~~~s~~~~~~---r--I~rv~lr~~~--Sg~~~v~v~~~~~-- 835 (905) T protein:vir:78 775 ---TVDTTDDFVVGFKYETKIT---L---PGFFTS-EENKADRVYAP---I--VEFLYLDLYY--SGRYQIEVDRIGY-- 835 (905) T ss_pred ---ccccCCeEEEeeeeeEEEe---e---cceEec-cCCCcccccce---E--EEEEEEEeec--ceeEEEEEcCCCc-- Confidence 1111111223333322221 1 122222 22221111111 1 1122222222 1100 1122 Q ss_pred chheeeeee--ehcccCCCCcCCCCcceeeeeccccceeeeEEEEEEEecCCCceEEEeEEEEEEeecCC Q lcl|Aclame:pro 704 RTWQAYRFR--RHFFPDNIDNQFDDGNSVVETKSRLRGSGKVLSLYITTEPKKNLHIYGWSMLVDVNGTV 771 (771) Q Consensus 704 ~~~q~Yr~~--r~~~p~~~~~~f~~~~~VV~TK~~~RG~G~~~~~~f~se~~KD~~llG~~~~~~~~g~~ 771 (771) +-|.+. .+..+.++...-....+-.. +-.+||..+-.+|+++++.--.|+||+.+.+.+-+=.- T Consensus 836 ---~~~~~~~~~~~~~~~~~~~~p~~~tg~~-~vP~~g~~~~~~v~I~sd~PlP~tvlsi~weg~Yn~r~ 901 (905) T protein:vir:78 836 ---DTINIDAGSIDANIYLADGAPLKEIATE-NVPLFTPGDQVTVTIKAPDPFPSAITGYSWQGHYNRRG 901 (905) T ss_pred ---ceecccccceecCcccCcccccccccEE-EEEeeccCceeEEEEEECCCCcEEEEEEEEEEEeccce Confidence 223221 11222221111111122111 23668999999999999999999999988776655433 No 34 >protein:vir:2109 Length: 472 # NCBI annotation: head completion protein # Family: family:all:1540 # MgeID: mge:46 # MgeName: P22 # Cross-refs: genbank:acc:NP_059633;genbank:gi:9635541;genbank:GeneID:1262840 Probab=98.73 E-value=7.6e-08 Score=59.63 Aligned_cols=421 Identities=13% Similarity=0.080 Sum_probs=189.0 Q ss_pred ceeeee-------ccCCCCcceEEEccccccCCcCcchheeeccccccCCCcccccccchhhhhccccccccCCCcce-- Q lcl|Aclame:pro 208 VPRVTW-------HSNEPSDPIVTFRSAASGKFPSNSDSVNLALSKRADVEPSTTDRFRAEDIVLNPIGTYETARGFF-- 278 (771) Q Consensus 208 ~~~~~~-------~s~s~~~~vv~~~~~~~G~yPSnaD~~n~~~~~~s~~e~~~~~~F~~~~~~~n~~Gs~~aarG~y-- 278 (771) -|.+-. +....+|+| ..-+ +-.||.-++. +..+..=|=.|-...+-.. ..+.||-| T Consensus 1 m~~~q~Pl~~g~~~~~~~~d~~-~~~p--VN~~a~~~~~----------~~s~~~lr~tPG~~~~~~~--~g~~RG~~~~ 65 (472) T protein:vir:21 1 MPIQQLPMMKGMGKDFKNADYI-DYLP--VNMLATPKEI----------LNSSGYLRSFPGITKRYDM--NGVSRGVEYN 65 (472) T ss_pred CceEEeecccccccccccccee-eeee--eeeeeeccCC----------cccceeeeecCCcceeccC--CCceeeeeec Confidence 222211 111222222 1101 1112222221 1111111111111111111 13556655 Q ss_pred -EEEeeecCcccceeeeecccccccccceeeec-chhhccCC-ceeeeeeccee---EEeeecceee-cccc---cCCcc Q lcl|Aclame:pro 279 -IIDAMARGKSRLEEIVKLKQRYPSLSFGVSSL-PQDETPGG-ASVVCEYAGRV---WYAGFSGQII-DGDD---QSPRL 348 (771) Q Consensus 279 -I~d~~~~~~s~~~~~~~~~~~~p~~~~~t~~~-p~d~~~g~-~t~v~~~aGRv---~y~g~~~~~~-~~~~---~~p~~ 348 (771) +-+++++..-..+=.+. +..++..|+ |-.-+-.+ ...|+.- +.+ .|.|..-+.. +.++ ..+++ T Consensus 66 t~~~~ly~V~G~~LY~v~------~~~G~i~gsgrVsMa~n~~~~~v~~~-~~~~~Y~~~~~~~t~~~~~~d~~f~~~dl 138 (472) T protein:vir:21 66 TAQNAVYRVCGGKLYKGE------SEVGDVAGSGRVSMAHGRTSQAVGVN-GQLVEYRYDGTVKTVSNWPADSGFTQYEL 138 (472) T ss_pred ccCCeEEEEeCCceEEEe------eeeeeecccccEEEeeCCeEEEEEEC-CceeEEEEecchhhhhcccCccccccccc Confidence 24445544333322221 112333333 21111111 1122111 222 2222222111 1100 00111 Q ss_pred cceeE--E--EeeecchhhccccccCCCCcCchhhh--------hhhcCCCEEeecCCCceeEEEeecceeEEEecceE- Q lcl|Aclame:pro 349 VSYIL--F--SQLVDSPADIVNCYQDGDPTSTEEPE--------LVDTDGGFIRIEGAHDIINLVNVGSAVMVVAANGI- 415 (771) Q Consensus 349 ~~yv~--f--Sqli~s~~~lg~CyQ~~DPts~~~~d--------l~dtDGG~I~I~ga~~Iv~mv~~~ssLlVft~nGV- 415 (771) -.|+- | .+.|=. .+-++=+...|+.++.-.+ --+.| .|+++..+...|++|.+.-+ T Consensus 139 ~~~~dv~f~dGyfV~~-~~gt~~f~is~l~d~~~~~~y~~FatAE~~pD----------~Iv~i~~~~~~l~lfG~~TiE 207 (472) T protein:vir:21 139 GSVRDITRLRGRYAWS-KDGTDSWFITDLEDESHPDRYSAQYRAESQPD----------GIIGIGTWRDFIVCFGSSTIE 207 (472) T ss_pred cceeEEEEecceEEEc-cCCcceeEEecCCCCccccCCccceeeccCCC----------ceEEEEeeccEEEEEeccceE Confidence 11100 1 011100 0111112222222221111 11234 89999999999999999998 Q ss_pred -EEEEecccceeeecceeeeeee----eeeecCccceEEeCCeEEEEecCceEEecccccCcccccccCchhhhhhhhhc Q lcl|Aclame:pro 416 -WMIQGGSDYGFTATNYLVTKIS----EHGCSSPNSVVVVDNSFMYWGDDGIYHLTRNQYGDYVANNLTEKTIQKYYEKI 490 (771) Q Consensus 416 -Wal~G~S~~~fsAt~y~V~KIS----d~GcvspnSIV~id~aVvYwSDsGI~~L~~ne~g~~ss~nLte~tIqt~~~si 490 (771) |.+.|+++. ..|+.++.+ ..||.+|.||...|++++|+|..+-..+.....+...|+-++-..|+..++++ T Consensus 208 vw~ntG~ad~----~~fpy~r~~g~~iq~Gcaa~~sv~~~~~s~~~l~~~~~g~~~V~~~~g~qa~rIST~aIE~~i~~y 283 (472) T protein:vir:21 208 YFSLTGATTA----GAALYVAQPSLMVQKGIAGTYCKTPFADSYAFISHPATGAPSVYIIGSGQASPIATASIEKIIRSY 283 (472) T ss_pred EEEecCCCCc----CcCceEEcCcceeeecccCcchhhecCceEEEEecCCCcccEEEEccCceeEEecCHHHHHHHHhc Confidence 999997762 234455544 57999999999999999999999966666666666678888888899999999 Q ss_pred ChhHhcceeEEEEeeccE--EEEEecccccccccccceeEEecccccceee-eecceeccc-eeeeeeeeeeCCceeeec Q lcl|Aclame:pro 491 PSDAILNATGFYDSYDKK--VKWLYNTVLDGRTEPVTELVFDLALGAFYPS-KIGSLTAGR-LPIPVGSVKIPPYKLVET 566 (771) Q Consensus 491 p~~~k~~~~g~yD~~~~~--v~wly~e~~d~~~~y~tElVf~L~~~afY~~-ki~s~~ags-~~~~i~s~~vp~y~~~~t 566 (771) ..+....+.+++=.++.. +.+.+|. + -+|||+.++-|+.. .+ ..+.+. -++-... .++ .. T Consensus 284 ~~~e~~~A~~~t~~~eGH~fy~LtfP~----~-----Tw~yD~at~~~~e~W~~-~~sg~~~~~~R~~~-~~~-----~~ 347 (472) T protein:vir:21 284 TAEEMATGVMETLRFDSHELLIIHLPR----H-----VLVYDASSSQNGPQWCV-LKTGLYDDVYRGVD-FMY-----EG 347 (472) T ss_pred CCccccceEEEEEEeCCeEEEEEEcCC----e-----eEEEEcccCccCceeee-eccCCCcCceeEEE-EEe-----eC Confidence 988888888776566665 3334441 2 38999999988773 22 111111 1111111 111 11 Q ss_pred ceEEeecccceeeccceeeeeeeeeeeeeeeeEEEEEEEcCCCceEEEeeecCCchhhccccCCcccchhHhhhhhcccc Q lcl|Aclame:pro 567 GEEVTVASEQVTATGELVTVKVSTRSPVIRETKYIIVEKLSSPMRISFGGYTDEEFVDWKSVDGIGVDAPAYLLTGYLAG 646 (771) Q Consensus 567 ~~~V~v~~~~vv~~~~~v~~~~~~~~~~~r~~~y~~~~~~g~~~~~sF~~~~~d~F~Dw~~~~~~gvd~~sy~~tgy~~~ 646 (771) .. ..+|..+. -+.|.+.++ ...|-| -+ T Consensus 348 g~---------------~ivGD~~n-----G~ly~L~fd-------------~~~~~d----------------~~---- 374 (472) T protein:vir:21 348 NQ---------------ITCGDKSE-----AVVGQLQFD-------------ISSQYD----------------KQ---- 374 (472) T ss_pred Ce---------------EEEEEcCC-----CeEEEEEec-------------ccccCC----------------Cc---- Confidence 12 33444433 112222111 111111 00 Q ss_pred ccceeeeecceEEE-----EEe--eecceeEecccceEEEcCccceEEEEEEeeccCCCCCcccchheeeeeeehcccCC Q lcl|Aclame:pro 647 GDYQREKFVPYITF-----HFK--KTEDGFVEDAEGDWTPTNQSSCMVQSQWSWTNSPASNKWGRTWQAYRFRRHFFPDN 719 (771) Q Consensus 647 gd~~r~K~~pyl~~-----~~~--~TEd~~t~d~~g~~~~~n~SScl~~~~w~~s~~~~~~kw~~~~q~Yr~~r~~~p~~ 719 (771) +-|-.-.|.++. ++. -++.|+.+++| ++--+||.++. -|++++++ +.+ T Consensus 375 --~~~~r~~p~~~~dn~R~fd~eve~~~Gv~q~~d-------------~v~L~wSddG~--~~~~~~~~--------~~g 429 (472) T protein:vir:21 375 --QEHLLFTPLFKADNARCFDLEVESSTGVAQYAD-------------RLFLSATTDGI--NYGREQMI--------EQN 429 (472) T ss_pred --CcEEEEccceeCCCCEEEEEeeeccCCCCCcCc-------------EEEEEeecccc--ccccceee--------ccC Confidence 001111122210 112 23333333322 35556777644 59998876 233 Q ss_pred CCcCCCCcceeeeeccccceeeeE---EEEEEEecCCCceEEEeEEEEEE Q lcl|Aclame:pro 720 IDNQFDDGNSVVETKSRLRGSGKV---LSLYITTEPKKNLHIYGWSMLVD 766 (771) Q Consensus 720 ~~~~f~~~~~VV~TK~~~RG~G~~---~~~~f~se~~KD~~llG~~~~~~ 766 (771) -.+.+ .|+.+.|-=|+| +.|||+=-..-+.-|.|-++-+- T Consensus 430 ~~g~~-------~tr~~~~RlG~~r~~v~f~~r~~~~~~~~l~g~~~~~E 472 (472) T protein:vir:21 430 EPFVY-------DKRVLWKRVGRIRRLIGFKLRVITKSPVTLSGCQIRLE 472 (472) T ss_pred Cccch-------hcceeeeeeeecccceeEEEEEEecCcceeeeeEEeeC Confidence 33332 255555555543 23555544455566666665444 No 35 >protein:vir:100960 Length: 472 # NCBI annotation: gp10 # Family: family:all:1540 # MgeID: mge:1509 # MgeName: ST104 # Cross-refs: genbank:acc:YP_006412;genbank:gi:46358704;genbank:GeneID:2777110 Probab=98.72 E-value=8.4e-08 Score=59.38 Aligned_cols=428 Identities=13% Similarity=0.116 Sum_probs=193.1 Q ss_pred cccCCCccCchhheeeeeccccceeeeeccCCCCcceEEEccccccCCcCcchheeeccccccCCCcccccccchhhhhc Q lcl|Aclame:pro 186 IATRPTVQTNAHIYNLRNQTFGVPRVTWHSNEPSDPIVTFRSAASGKFPSNSDSVNLALSKRADVEPSTTDRFRAEDIVL 265 (771) Q Consensus 186 ~~~rpttlS~eh~YnL~NqgW~~~~~~~~s~s~~~~vv~~~~~~~G~yPSnaD~~n~~~~~~s~~e~~~~~~F~~~~~~~ 265 (771) .+-.+-.| +++..+.....|.+-+. + +.-||--++.-|+-.--.+.+ ...+| T Consensus 1 m~~~~ipl---------------~~g~~~~~~~a~~~~~~-p--vn~y~~~~~~~~ss~~Lr~~p---G~~~~------- 52 (472) T protein:vir:10 1 MPIQQLPM---------------MKGMGKDFKNADYIDYL-P--INMLATPKEVLNSSGYLRSFP---GIAKR------- 52 (472) T ss_pred Cceeeccc---------------ccccccCCCcCcceeee-e--eccccccccccccccceeecc---cceee------- Confidence 11111111 11111112222222111 0 122332222211111111110 01111 Q ss_pred cccccccCCCcceE---EEeeecCcccceeeeecccccccccceeeec-chhhccCC-ceeeeeeccee---EEeeecce Q lcl|Aclame:pro 266 NPIGTYETARGFFI---IDAMARGKSRLEEIVKLKQRYPSLSFGVSSL-PQDETPGG-ASVVCEYAGRV---WYAGFSGQ 337 (771) Q Consensus 266 n~~Gs~~aarG~yI---~d~~~~~~s~~~~~~~~~~~~p~~~~~t~~~-p~d~~~g~-~t~v~~~aGRv---~y~g~~~~ 337 (771) .+ =.-++||-+. =+.+++-....+=.+. ...+...|+ |-.-+-.+ ...|+. .+.+ .|.|..-+ T Consensus 53 a~--~~G~~RG~~~~~~~~~ly~V~G~~Ly~v~------~~iG~i~gsgrVsMa~n~~~~~v~~-~~~~~~Y~~~~~~~t 123 (472) T protein:vir:10 53 ND--VNGVSRGVEYNTAQNAVYRVCGGKLYKGE------AVVGDVAGSGRVSMAHGRTSQAVGV-NGQLIEYRYDGAVKT 123 (472) T ss_pred cC--CCCcccceeeeeeCCeEEEEeCcceEEEE------eeEeeccCcccEEEeeCCeEEEEEE-CCceeEEEEecchhh Confidence 11 1334444321 1122222111111110 011222222 11111111 111111 1212 22222211 Q ss_pred eec-ccc---cCC---------cccce----------eEEEeeecchhhccccccCCCCcCchhhhhhhcCCCEEeecCC Q lcl|Aclame:pro 338 IID-GDD---QSP---------RLVSY----------ILFSQLVDSPADIVNCYQDGDPTSTEEPELVDTDGGFIRIEGA 394 (771) Q Consensus 338 ~~~-~~~---~~p---------~~~~y----------v~fSqli~s~~~lg~CyQ~~DPts~~~~dl~dtDGG~I~I~ga 394 (771) ... .++ ..+ .+.|| .|+|.|-|... +.-|. .=++.|. +.| T Consensus 124 ~~~~~~d~~f~~~dl~~~~dv~f~dGyfV~~~~gt~~~~iS~l~d~~~--~~~y~-~fa~AE~-----~pD--------- 186 (472) T protein:vir:10 124 VSNWPADSGFTQYELGSVRDITRLRGRYAWSKDGTDSWFITDLEDESH--PDRYS-AEYRAES-----QPD--------- 186 (472) T ss_pred hhcccCccccccccccceeEEEEecceEEEccCCCceEEEeccCCccc--ccccc-ccccccC-----CCC--------- Confidence 100 100 000 01112 33333322111 00000 0022333 345 Q ss_pred CceeEEEeecceeEEEecceE--EEEEecccceeeecceeeeeee----eeeecCccceEEeCCeEEEEecCceEEeccc Q lcl|Aclame:pro 395 HDIINLVNVGSAVMVVAANGI--WMIQGGSDYGFTATNYLVTKIS----EHGCSSPNSVVVVDNSFMYWGDDGIYHLTRN 468 (771) Q Consensus 395 ~~Iv~mv~~~ssLlVft~nGV--Wal~G~S~~~fsAt~y~V~KIS----d~GcvspnSIV~id~aVvYwSDsGI~~L~~n 468 (771) .|+++..+...|++|.+.-+ |.+.|+++. ..|+.++.+ ..||.+|.||...|++++|++..+-..+... T Consensus 187 -~Ivgi~~~~~~l~lfG~~TiEvw~ntG~ad~----~~fpy~r~~g~~i~~Gcaa~~sv~~~~~s~~~l~~~~~g~~~V~ 261 (472) T protein:vir:10 187 -GIIGIGSWRDFIVCFGSSTIEYFSLTGATTV----GAALYVAQPSLMVQKGIAGTYCKTPFADSYAFISHPATGAPSVY 261 (472) T ss_pred -ceEEEEeeccEEEEEeccceEEEEecCCCCc----CcCceEEcCcceeeecccCcchhhecCceEEEEecCCCcccEEE Confidence 89999999999999999998 999998762 234445544 5799999999999999999999996666666 Q ss_pred ccCcccccccCchhhhhhhhhcChhHhcceeEEEEeeccE--EEEEecccccccccccceeEEecccccceeeeecceec Q lcl|Aclame:pro 469 QYGDYVANNLTEKTIQKYYEKIPSDAILNATGFYDSYDKK--VKWLYNTVLDGRTEPVTELVFDLALGAFYPSKIGSLTA 546 (771) Q Consensus 469 e~g~~ss~nLte~tIqt~~~sip~~~k~~~~g~yD~~~~~--v~wly~e~~d~~~~y~tElVf~L~~~afY~~ki~s~~a 546 (771) ..+...|+-++-..|+..++++..+....+.+++=.++.. +.+-+|. + -+|||+.++-|+..--...+. T Consensus 262 ~~~g~qa~rIST~aIE~~i~~y~~~e~~~A~~~t~~~~GH~fy~LtfP~----~-----Tw~yD~at~~w~erw~~~~~g 332 (472) T protein:vir:10 262 IIGSGQASPIATASIEKIIRSYTAEELATGVMETLRFDSHELLIIHLPR----H-----VLVYDASSSQNGPQWCVLKTG 332 (472) T ss_pred EccCceeEEecCHHHHHHHHhcCCccccceEEEEEEeCCeEEEEEEcCC----e-----eEEEEcccCcccceeeeecCC Confidence 6666778888888899999999988888888776566655 3334441 2 389999999998841112222 Q ss_pred cce-eeeeeeeeeCCceeeecceEEeecccceeeccceeeeeeeeeeeeeeeeEEEEEEEcCCCceEEEeeecCCchhhc Q lcl|Aclame:pro 547 GRL-PIPVGSVKIPPYKLVETGEEVTVASEQVTATGELVTVKVSTRSPVIRETKYIIVEKLSSPMRISFGGYTDEEFVDW 625 (771) Q Consensus 547 gs~-~~~i~s~~vp~y~~~~t~~~V~v~~~~vv~~~~~v~~~~~~~~~~~r~~~y~~~~~~g~~~~~sF~~~~~d~F~Dw 625 (771) +.. ++-... .+ ..... ..+|+.+. |.-.++.|..|++. T Consensus 333 ~~~~~~R~~~-~~-----~~~g~---------------~ivGD~~n---------------G~ly~ld~~~~t~~----- 371 (472) T protein:vir:10 333 LYDDVYRAVD-FM-----YEGNQ---------------ITCGDKSE---------------ALTGQLQFDISSQY----- 371 (472) T ss_pred CcccceeEEE-EE-----eeCCe---------------EEEEEcCC---------------CeEEEEecccCCCC----- Confidence 221 111111 11 11122 34555555 44455555555542 Q ss_pred cccCCcccchhHhhhhhccccccceeeeecceEEEEEe-eecceeEecccceEEEcCccceEEEEEEeeccCCCCCcccc Q lcl|Aclame:pro 626 KSVDGIGVDAPAYLLTGYLAGGDYQREKFVPYITFHFK-KTEDGFVEDAEGDWTPTNQSSCMVQSQWSWTNSPASNKWGR 704 (771) Q Consensus 626 ~~~~~~gvd~~sy~~tgy~~~gd~~r~K~~pyl~~~~~-~TEd~~t~d~~g~~~~~n~SScl~~~~w~~s~~~~~~kw~~ 704 (771) |. ..+-=+.+.+... .+.++ +-|. -++.|+-+++| ++--+||.++. -|++ T Consensus 372 g~------~~~~~~~~p~l~~----dn~R~----~d~eve~~~Gv~~~~d-------------~v~L~wSddG~--~~~~ 422 (472) T protein:vir:10 372 GL------QQEHLLFTPLFKA----DNARC----FDLEVESSTGVAQYAD-------------RLFLSATTDGI--NYGR 422 (472) T ss_pred CC------cccceEEcccccC----CCCEE----EEEeeeccCCCCCcCc-------------EEEEEeecccc--cccc Confidence 11 1111112222221 11111 1121 33344444433 35556777644 5999 Q ss_pred hheeeeeeehcccCCCCcCCCCcceeeeeccccceeeeE---EEEEEEecCCCceEEEeEEEEEE Q lcl|Aclame:pro 705 TWQAYRFRRHFFPDNIDNQFDDGNSVVETKSRLRGSGKV---LSLYITTEPKKNLHIYGWSMLVD 766 (771) Q Consensus 705 ~~q~Yr~~r~~~p~~~~~~f~~~~~VV~TK~~~RG~G~~---~~~~f~se~~KD~~llG~~~~~~ 766 (771) ++++ +.+-.+.++ |+.+.|-=|+| +.|||+=-..-+.-|.|-++-+- T Consensus 423 ~~~~--------~~g~~g~~~-------tr~~~~RlG~~r~~v~f~~r~~~~~~~~l~g~~~~~E 472 (472) T protein:vir:10 423 EQMI--------EQNEPFVYD-------KRVIWKRVGRIRRLIGFKLRVITKSPVTLSGCQIRLE 472 (472) T ss_pred ceee--------ccCCccchh-------cceeeeeeeecccceeEEEEEEecCcceeeeeEEeeC Confidence 8876 233333322 55555555543 23555544455566666665444 No 36 >protein:vir:9268 Length: 472 # NCBI annotation: 10 # Family: family:all:1540 # MgeID: mge:164 # MgeName: ST64T # Cross-refs: genbank:acc:NP_720332;genbank:gi:24371590;genbank:GeneID:955815 Probab=98.72 E-value=8.5e-08 Score=59.34 Aligned_cols=413 Identities=14% Similarity=0.135 Sum_probs=188.0 Q ss_pred ceeeeecc--C-----CCCcceEEEccccccCCcCcchheeeccccccCCCcccccccchhhhhccccccccCCCcceE- Q lcl|Aclame:pro 208 VPRVTWHS--N-----EPSDPIVTFRSAASGKFPSNSDSVNLALSKRADVEPSTTDRFRAEDIVLNPIGTYETARGFFI- 279 (771) Q Consensus 208 ~~~~~~~s--~-----s~~~~vv~~~~~~~G~yPSnaD~~n~~~~~~s~~e~~~~~~F~~~~~~~n~~Gs~~aarG~yI- 279 (771) -|.+.... + +..|.+-+. .+.-||--++.-|+-.--.+ .|-.-...+ =.-++||-+. T Consensus 1 m~~~~ipl~~g~~~~~~~a~~~~~~---pvn~y~~~~~~~~ss~~Lr~----------~pG~~~~a~--~~G~~RG~~~~ 65 (472) T protein:vir:92 1 MPIQQLPMMKGMGKDFKNADYIDYL---PINMLATPKEVLDSSGYLRS----------FPGIAKRND--VNGVSRGVEYN 65 (472) T ss_pred CceeeccccccccccCccCcceeee---ecccccccccccccccceee----------cccceeecC--CCCcccceeee Confidence 22221111 1 111111110 01222222221111110011 111111111 1334555321 Q ss_pred --EEeeecCcccceeeeecccccccccceeeec-chhhccC-Cceeeeeeccee---EEeeecceeec-ccc---cCC-- Q lcl|Aclame:pro 280 --IDAMARGKSRLEEIVKLKQRYPSLSFGVSSL-PQDETPG-GASVVCEYAGRV---WYAGFSGQIID-GDD---QSP-- 346 (771) Q Consensus 280 --~d~~~~~~s~~~~~~~~~~~~p~~~~~t~~~-p~d~~~g-~~t~v~~~aGRv---~y~g~~~~~~~-~~~---~~p-- 346 (771) =+.+++-....+=.+. ...+...|+ |-.-+-+ ....|+.- |++ .|.|..-+... .++ ..+ T Consensus 66 ~~~~~ly~V~G~~Ly~v~------~~iG~i~gsgrVsMa~n~~~~av~~~-~~~~~Y~~~~~~~t~~~~~~d~~f~~~dl 138 (472) T protein:vir:92 66 TAQNAVYRVCGGKLYKGE------AVVGDVAGSGRVSMAHGRTSQAVGVN-GQLIEYRYDGAVKTVSNWPADSGFTQYEL 138 (472) T ss_pred eeCCeEEEEeCcceEEEE------eeEeeccCcccEEEecCCeEEEEEEC-CceeEEEEecchhhhhcccCccccccccc Confidence 1222222111111110 012222222 1111111 11222211 222 22222221110 100 000 Q ss_pred -------cccce----------eEEEeeecchhhccccccCCCCcCchhhhhhhcCCCEEeecCCCceeEEEeecceeEE Q lcl|Aclame:pro 347 -------RLVSY----------ILFSQLVDSPADIVNCYQDGDPTSTEEPELVDTDGGFIRIEGAHDIINLVNVGSAVMV 409 (771) Q Consensus 347 -------~~~~y----------v~fSqli~s~~~lg~CyQ~~DPts~~~~dl~dtDGG~I~I~ga~~Iv~mv~~~ssLlV 409 (771) .+.|| .|+|.|-|... +.-|. .=++.|. +.| .|+++..+...|++ T Consensus 139 ~~~~dv~f~dGyfV~~~~gt~~~~iS~l~d~~~--~~~y~-~fa~AE~-----~pD----------~Ivgi~~~~~~l~l 200 (472) T protein:vir:92 139 GSVRDITRLRGRYAWSKDGTDSWFITDLEDESH--PDRYS-AEYRAES-----QPD----------GIIGIGSWRDFIVC 200 (472) T ss_pred cceeEEEEecceEEEccCCCceEEEeccCCccc--ccccc-ccccccC-----CCC----------ceEEEEeeccEEEE Confidence 01122 33333322111 00000 0022332 345 89999999999999 Q ss_pred EecceE--EEEEecccceeeecceeeeeee----eeeecCccceEEeCCeEEEEecCceEEecccccCcccccccCchhh Q lcl|Aclame:pro 410 VAANGI--WMIQGGSDYGFTATNYLVTKIS----EHGCSSPNSVVVVDNSFMYWGDDGIYHLTRNQYGDYVANNLTEKTI 483 (771) Q Consensus 410 ft~nGV--Wal~G~S~~~fsAt~y~V~KIS----d~GcvspnSIV~id~aVvYwSDsGI~~L~~ne~g~~ss~nLte~tI 483 (771) |.+.-+ |.+.|+++. ..|+.++.+ ..||.+|.||...+++++|+|..+-..+.....+...|+-++-..| T Consensus 201 fG~~TiEvw~ntG~ad~----~~fpy~r~~g~~i~~Gcaa~~sv~~~~~s~~~l~~~~~g~~~V~~~~g~qa~rIST~aI 276 (472) T protein:vir:92 201 FGSSTIEYFSLTGATTV----GAALYVAQPSLMVQKGIAGTYCKTPFADSYAFISHPATGAPSVYIIGSGQASPIATASI 276 (472) T ss_pred EeccceEEEEecCCCCc----CcCceEEcCcceeeecccCcchhhecCceEEEEecCCCcccEEEEccCceeEEecCHHH Confidence 999998 999998762 234445544 5799999999999999999999996666666666677888888889 Q ss_pred hhhhhhcChhHhcceeEEEEeeccE--EEEEecccccccccccceeEEecccccceeeeecc-eeccce--eeeeeeeee Q lcl|Aclame:pro 484 QKYYEKIPSDAILNATGFYDSYDKK--VKWLYNTVLDGRTEPVTELVFDLALGAFYPSKIGS-LTAGRL--PIPVGSVKI 558 (771) Q Consensus 484 qt~~~sip~~~k~~~~g~yD~~~~~--v~wly~e~~d~~~~y~tElVf~L~~~afY~~ki~s-~~ags~--~~~i~s~~v 558 (771) +..+.++..+.+..+.+++=.++.. +.+.+| + . -+|||+.++-|+.. |. ...|.. ++-... .+ T Consensus 277 E~~i~~y~~~e~~~a~~~s~~~eGH~fy~LtfP---~-~-----Tw~yD~at~~~~e~--W~~~~sg~~~~~~R~~~-~~ 344 (472) T protein:vir:92 277 EKIIRSYTADELATGVMEALRFDSHELLIIHLP---R-H-----VLVYDASSSQNGPQ--WCVLKTGLYDDVYRAID-FM 344 (472) T ss_pred HHHHHhcCcchhceeeEEEEEecCeeEEEEEcC---C-c-----eEEEEcccCcCCce--eeeecCCCcccceeEEE-EE Confidence 9999999888888888776556665 333444 1 2 38999999988873 22 112211 111111 11 Q ss_pred CCceeeecceEEeecccceeeccceeeeeeeeeeeeeeeeEEEEEEEcCCCceEEEeeecCCchhhccccCCcccchhHh Q lcl|Aclame:pro 559 PPYKLVETGEEVTVASEQVTATGELVTVKVSTRSPVIRETKYIIVEKLSSPMRISFGGYTDEEFVDWKSVDGIGVDAPAY 638 (771) Q Consensus 559 p~y~~~~t~~~V~v~~~~vv~~~~~v~~~~~~~~~~~r~~~y~~~~~~g~~~~~sF~~~~~d~F~Dw~~~~~~gvd~~sy 638 (771) ..... ..+|..+. |.-+++.|-.+++.+=. T Consensus 345 -----~~~g~---------------~ivGD~~n---------------G~ly~l~~~~~t~~~~~--------------- 374 (472) T protein:vir:92 345 -----YEGNQ---------------ITCGDKSE---------------AVTGQLQFDISSQYDKQ--------------- 374 (472) T ss_pred -----eeCCe---------------EEEEEcCC---------------CeEEEEeccccccCCCc--------------- Confidence 11122 34455444 33333433333332211 Q ss_pred hhhhccccccceeeeecceEEE-----EEe--eecceeEecccceEEEcCccceEEEEEEeeccCCCCCcccchheeeee Q lcl|Aclame:pro 639 LLTGYLAGGDYQREKFVPYITF-----HFK--KTEDGFVEDAEGDWTPTNQSSCMVQSQWSWTNSPASNKWGRTWQAYRF 711 (771) Q Consensus 639 ~~tgy~~~gd~~r~K~~pyl~~-----~~~--~TEd~~t~d~~g~~~~~n~SScl~~~~w~~s~~~~~~kw~~~~q~Yr~ 711 (771) +.|..-.|.++. ++. -++.|+.+++| ++--+||.++. -|++++++ T Consensus 375 ----------~~~~~~~P~~~~dn~R~~d~eve~~~Gv~q~~d-------------~v~L~wSddG~--~~~~~~~~--- 426 (472) T protein:vir:92 375 ----------QEHLLFTPIFKADNARCFDLEVESSTGVAQYAD-------------RLFLSATTDGI--NYGREQMI--- 426 (472) T ss_pred ----------ceEEEEeceEecCCCEEEEEeeeccCCCCCcCc-------------eEEEEeecccc--ccccceee--- Confidence 222222333331 122 23333333222 35556777644 59998876 Q ss_pred eehcccCCCCcCCCCcceeeeeccccceeeeE---EEEEEEecCCCceEEEeEEEEEE Q lcl|Aclame:pro 712 RRHFFPDNIDNQFDDGNSVVETKSRLRGSGKV---LSLYITTEPKKNLHIYGWSMLVD 766 (771) Q Consensus 712 ~r~~~p~~~~~~f~~~~~VV~TK~~~RG~G~~---~~~~f~se~~KD~~llG~~~~~~ 766 (771) +.+-.+.+ .|+.+.|-=|+| +.|||+=-..-+.-|.|-++-+- T Consensus 427 -----~~g~~g~~-------~tr~~~~RlG~~r~~v~f~~r~~~~~~~~l~g~~~~~E 472 (472) T protein:vir:92 427 -----EQNEPFVY-------DKRVLWKRVGRIRRLIGFKLRVITKSPVTLSGCQIRLE 472 (472) T ss_pred -----ccCCccch-------hcceeeeeeeecccceeEEEEEEecCcceeeeeEEeeC Confidence 23333332 255555555543 23555544455566666665444 No 37 >protein:vir:105563 Length: 396 # NCBI annotation: hypothetical protein # Family: family:all:27455 # MgeID: mge:1540 # MgeName: F116 # Cross-refs: genbank:acc:YP_164316;genbank:gi:56692963;genbank:GeneID:3197174 Probab=98.49 E-value=2.4e-07 Score=56.90 Aligned_cols=363 Identities=14% Similarity=0.116 Sum_probs=189.8 Q ss_pred Cchhhhhhhhccccceeeeccchhc------CCCCccccceeeeeccccchhhhhcceeecCCceeecceeeccCceeee Q lcl|Aclame:pro 1 MAKTTNAAEFNTFVGGLITEASPLT------FPQNASIDEVNFILNRDGSRNRRNGMDFENGATKVVCNTLVPADGTIAV 74 (771) Q Consensus 1 Ma~~~~~~e~ntFv~GliTEan~Lt------~P~nas~De~N~~L~k~G~r~RR~Gl~~E~s~~~~l~~~~~~s~~~~~v 74 (771) ||. .-.+++-|.+-=+-+-. -|.-+.+|-.|-+|..+|--+||-|..+.+.+.+ T Consensus 1 ~~~-----~~~~~~~ginnv~~e~~l~~~~~~~~~~~r~a~nvdi~~~G~~~~r~~~tr~~~g~l--------------- 60 (396) T protein:vir:10 1 MAT-----TSLVPLAGINNVAEDAALQRGGESPRLYVRDAVNIDLSPAGKAQLRASVRQVTDQPF--------------- 60 (396) T ss_pred Ccc-----eeeeeeecccccccccccccCCCcccceeeeeeeecccCCCchhhhccCcccCCcee--------------- Confidence 653 23566666654333332 3455778999999999999999999999996663 Q ss_pred eechhhhccCccceeEEEEEEccEEEEEecCCceeeheeeEeeecceeCC---CcceeeEEeeEEEEEEcCCcceEEEec Q lcl|Aclame:pro 75 TSHNWENAGGEVGRWISLVQVGTELKFFQTTGETLSEGNFYNYQFVNMSP---SHKLSYAVVDGLLVVANGSRDIYVFEY 151 (771) Q Consensus 75 t~~~W~~~~g~v~~~~l~~q~g~~l~~~d~t~~~lSn~~l~~~~fv~~sP---~~~is~~~v~G~lVva~~~~~~~i~~~ 151 (771) ..-|+.+-+... | .+ .+.-|+.+++.. +.+. ..+ -.++.+..++|++.++.+..+-.. + T Consensus 61 -~~~~~~~~~~~~--~-~~-~~~tl~~~~~~~----------w~~~-~~v~v~~~pva~d~~~~Rvy~t~~~~p~~~--~ 122 (396) T protein:vir:10 61 -RQLWQSPLHGDA--F-GA-LGDQWGKVDPHS----------WTFE-PLAQIGEGDLSHEVLNNRVCVAGTAGIFTY--D 122 (396) T ss_pred -cccccCccccce--e-ee-CCceEEEEeCCe----------EEEE-eeeeeccCchhccccCCeEEEEcCCCceee--e Confidence 235764332222 1 12 366666666542 1111 223 236888888899999987776421 1 Q ss_pred cCCceeeEEEEEEEEEeeeeccccccCcceeccccccCCCccCchhheeeeeccccceeeeeccCCCCcceEEEcccc-- Q lcl|Aclame:pro 152 DSGSVSVTTKRLLVRDLFGVQDIVNGVDLRQGNDIATRPTVQTNAHIYNLRNQTFGVPRVTWHSNEPSDPIVTFRSAA-- 229 (771) Q Consensus 152 ~~~s~~~~t~~l~iRd~~~l~d~~~g~~~~~~~~~~~rpttlS~eh~YnL~NqgW~~~~~~~~s~s~~~~vv~~~~~~-- 229 (771) ...++. + |+..-.......--.+|++++ |. |=++|.+.-+ -++..+++-+--..+ T Consensus 123 ~~~~y~-----------L-------~vp~P~~a~~~a~~Gsl~~~~-~~-Y~~t~V~~~g---EEs~p~~~S~~v~~~gg 179 (396) T protein:vir:10 123 GAQAER-----------L-------TLDTPAPPLLVAGAGSLSQGT-YG-AAVAWLRGPQ---ESAPSLIAFAEVTDAGA 179 (396) T ss_pred CCccee-----------c-------CcCCCcccccccccCccCCce-EE-EEEEEEecCC---CcCcccccccccCCCCC Confidence 122211 1 111111111112223466544 33 6777763322 222222221000000 Q ss_pred ---ccCCcCcch--heeeccccccCCCcccccccchhhhhccccccccCCCcceEEEeeecCcccceeeeeccccccccc Q lcl|Aclame:pro 230 ---SGKFPSNSD--SVNLALSKRADVEPSTTDRFRAEDIVLNPIGTYETARGFFIIDAMARGKSRLEEIVKLKQRYPSLS 304 (771) Q Consensus 230 ---~G~yPSnaD--~~n~~~~~~s~~e~~~~~~F~~~~~~~n~~Gs~~aarG~yI~d~~~~~~s~~~~~~~~~~~~p~~~ 304 (771) ...-|.+.- .++++.+-.++.+ -| =++.+.+....|++ |+.. T Consensus 180 ~~vtl~~~~~~~i~~~RiYrS~~~G~~-----~~--------l~aE~~a~~~s~vl--------------------Ps~~ 226 (396) T protein:vir:10 180 LEVTFPLCLDASVTGARLYLTRANGGE-----LL--------LAGDYPLGAATVIL--------------------PTLP 226 (396) T ss_pred cEEEEEcccCCCcceEEEEEeCCChhh-----hh--------heehhccceeeeee--------------------ecCC Confidence 001122221 2233332111100 01 11222333333331 1111 Q ss_pred ceeeecchhhccC-----CceeeeeecceeEEeeecceeecccccCCcccceeEEEeeecchhhccccccCCCCcCchhh Q lcl|Aclame:pro 305 FGVSSLPQDETPG-----GASVVCEYAGRVWYAGFSGQIIDGDDQSPRLVSYILFSQLVDSPADIVNCYQDGDPTSTEEP 379 (771) Q Consensus 305 ~~t~~~p~d~~~g-----~~t~v~~~aGRv~y~g~~~~~~~~~~~~p~~~~yv~fSqli~s~~~lg~CyQ~~DPts~~~~ 379 (771) . .| |-++.++ +=..++-+|||+|.| .|. . |.||. |. .. T Consensus 227 w--~g-pP~~~~gL~pmP~G~~~A~faGRi~~A--~Gn-----~--------V~FSE----------------p~---~P 269 (396) T protein:vir:10 227 E--LG-RPAQFRHLSPMPTGKHLAYWRGRLLIA--RAN-----V--------LRFSE----------------AL---AY 269 (396) T ss_pred C--CC-CCccccccccCchhHhhhhhcceEEEE--eCC-----E--------EEEec----------------CC---CC Confidence 0 01 1111111 122478889999974 233 2 67753 11 12 Q ss_pred hhhhcCCCEEeecCCCceeEEEeecceeEEEecceEEEEEecccceeeecceeeeeeee------------eeecCccce Q lcl|Aclame:pro 380 ELVDTDGGFIRIEGAHDIINLVNVGSAVMVVAANGIWMIQGGSDYGFTATNYLVTKISE------------HGCSSPNSV 447 (771) Q Consensus 380 dl~dtDGG~I~I~ga~~Iv~mv~~~ssLlVft~nGVWal~G~S~~~fsAt~y~V~KISd------------~GcvspnSI 447 (771) .+.|.=-|+++.++ +|+.|.+++.+|||.++-+++.+.|.+-... ...|+.. -.|++-+|+ T Consensus 270 h~~~~~~~~~~~~~--~Iv~lapv~~gL~Vgt~~~~y~~~G~dP~sm-----s~~~l~~~~pvp~S~v~~p~~~~s~rs~ 342 (396) T protein:vir:10 270 HLHDERYGFVQMPQ--RITFVQPVDGGIWVGQVDHVAFLDGADPASL-----SVSRRASRAPVPGSAVLVPAEVVGTNAS 342 (396) T ss_pred ceecchhccCCCCC--ceEEEEEecCeEEEEEcCcEEEEEcCChhHc-----ceeecccCCCcccchhcccchhhhcccc Confidence 34444346666444 8999999999999999999999988666533 2344422 136899999 Q ss_pred EEeCCeEEEEecCceEEecccccCcccccccCchhhhhhhhhcChhHhcceeEEEEeeccEEEEEec Q lcl|Aclame:pro 448 VVVDNSFMYWGDDGIYHLTRNQYGDYVANNLTEKTIQKYYEKIPSDAILNATGFYDSYDKKVKWLYN 514 (771) Q Consensus 448 V~id~aVvYwSDsGI~~L~~ne~g~~ss~nLte~tIqt~~~sip~~~k~~~~g~yD~~~~~v~wly~ 514 (771) +..+.+++|.|.+|+....++-.-. +|+++= |.-..-.++ .|=..++|.+.+|+ T Consensus 343 ~~~~~~~lwas~dGl~~g~~~G~v~----~l~~~~-------i~p~~~~A~--~~~~~drRy~~~~~ 396 (396) T protein:vir:10 343 PDGSPVAVWLAENGYVMGTSSGAIA----EVHAGV-------LAGITGRAG--TSVVFDRRLLTAVS 396 (396) T ss_pred cccCcEEEEccCCcEEEEcCCceee----eecccc-------cCCCcccce--EEEeecCeEEEEeC Confidence 9999999999999999866654322 244441 222222222 33346778877775 No 38 >protein:vir:100022 Length: 976 # NCBI annotation: T7-like tail tubular protein B # Family: family:all:825 # MgeID: mge:1604 # MgeName: P-SSP7 # Cross-refs: genbank:acc:YP_214208;genbank:gi:61806431;genbank:GeneID:3294702 Probab=97.96 E-value=9.2e-06 Score=48.19 Aligned_cols=637 Identities=12% Similarity=0.100 Sum_probs=233.7 Q ss_pred Cchhhhhhhhccccceeeeccchhc-CCCCcc------ccceeeeec-----------cccchhhhhc-----------c Q lcl|Aclame:pro 1 MAKTTNAAEFNTFVGGLITEASPLT-FPQNAS------IDEVNFILN-----------RDGSRNRRNG-----------M 51 (771) Q Consensus 1 Ma~~~~~~e~ntFv~GliTEan~Lt-~P~nas------~De~N~~L~-----------k~G~r~RR~G-----------l 51 (771) |+.+..+.+. =++++.+|.+-+. +|+.+. .|...+.+. ++|+..++.. + T Consensus 208 ~~~~~~~~~~--q~~~~~s~~~G~~~~~~~v~~~~f~~~~G~~~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 285 (976) T protein:vir:10 208 MVARTSRPSN--STRCDDSAGDGRDAYAPNVGTKVFNVTDGASLTDEANSGSYTYTIDVKDSSNNSVNRGVNLYFRIRTV 285 (976) T ss_pred chhhHhHhhh--hhcccccccccccccCceeeeeEEEeccCccceEcCCcceEEEEeeccccceEEeecCCceEEEEccc Confidence 1111111000 1233444433321 122221 111111111 2222222111 1 Q ss_pred ee---ecCCceeecceeeccCceeeeeechhhhccCc-----cceeEEEEEEccEEEEEecCCceeeheeeE---e---- Q lcl|Aclame:pro 52 DF---ENGATKVVCNTLVPADGTIAVTSHNWENAGGE-----VGRWISLVQVGTELKFFQTTGETLSEGNFY---N---- 116 (771) Q Consensus 52 ~~---E~s~~~~l~~~~~~s~~~~~vt~~~W~~~~g~-----v~~~~l~~q~g~~l~~~d~t~~~lSn~~l~---~---- 116 (771) .+ ...++- +..++--.-++--++..|-...|. .-+++-=.|++-.+..-... ..-.+.... + T Consensus 286 ~~~~~~~~gt~--~~~~~~Y~~~y~~~~~v~~~~~g~~~~~~~~V~v~g~~Y~it~~~~~~~-~~~a~~~~~~~~~t~~d 362 (976) T protein:vir:10 286 GQSVPFTTGSG--SSATTTYQARYTTTFDLLYGGTGWQEGDYFYVWMKDGYYKITVEAISTA-NVQANLGLIRPNPTPFD 362 (976) T ss_pred cceeecccccc--cceeeeeeEEEEeEEEEecCCCCcccCceEEEEccccceeeEEEEeece-eEEeccccccCcCCcCc Confidence 10 001110 000000000112222222222111 11111111111111100000 000000000 0 Q ss_pred -------------e-ecceeCCC-cceeeEEeeEEEEEEcCCcceEEEeccCCceeeEEEEEEEEEeee-eccccccCcc Q lcl|Aclame:pro 117 -------------Y-QFVNMSPS-HKLSYAVVDGLLVVANGSRDIYVFEYDSGSVSVTTKRLLVRDLFG-VQDIVNGVDL 180 (771) Q Consensus 117 -------------~-~fv~~sP~-~~is~~~v~G~lVva~~~~~~~i~~~~~~s~~~~t~~l~iRd~~~-l~d~~~g~~~ 180 (771) + .+++-.-. .-+++..+.+.+.|..++.- +...-.+ + ++ +|-... +++ T Consensus 363 ~~~~~~~~~ia~~L~~~l~a~~~~~g~tv~~~g~~~~i~~~~~~-~~~s~~~-~---~~----~~~~~~~V~~------- 426 (976) T protein:vir:10 363 TETAVTAESIIGDIRTAIIATGNFTSANVQQIGTGLYVTRPSGT-FNVTAPS-S---DL----LRVMSGEVAN------- 426 (976) T ss_pred ccccccHHHHHHHHHHhhcccccccceEEEEcCcEEEEEecCcc-eEecCCC-c---ee----EEEEEeeecc------- Confidence 0 00000000 00222223334444433321 1111111 1 11 121111 221 Q ss_pred eeccccccCCCccCchhheeeeeccccceeeeeccCCCCcc-eEEEccccccCCcCcchheeeccccccCCCcccc---c Q lcl|Aclame:pro 181 RQGNDIATRPTVQTNAHIYNLRNQTFGVPRVTWHSNEPSDP-IVTFRSAASGKFPSNSDSVNLALSKRADVEPSTT---D 256 (771) Q Consensus 181 ~~~~~~~~rpttlS~eh~YnL~NqgW~~~~~~~~s~s~~~~-vv~~~~~~~G~yPSnaD~~n~~~~~~s~~e~~~~---~ 256 (771) ..+-|.-+-+-++ -.++++++..|. ++.|... .+.+ +...|+|.... . T Consensus 427 -----~~~LP~~~~~g~~-----------v~V~~~~~~~d~yyv~~~~~-~~~~-----------~~~~w~E~~~~g~~~ 478 (976) T protein:vir:10 427 -----VDDLPSQCKHGYV-----------VKVANSEADADDYYVKFFGH-NNRD-----------GDGVWEECAKPSRNI 478 (976) T ss_pred -----hhhhhhhccCCcE-----------EEEecCCCCceeEEEEeecc-cccc-----------ccceEEEeecccccc Confidence 1111332211111 112333333332 3433222 1211 11112221111 1 Q ss_pred ccc----hhhhhccccccccCCCcceEEEeeecCcccceeeeecccccccccceeeecchhhccCC-ceeeeeecceeEE Q lcl|Aclame:pro 257 RFR----AEDIVLNPIGTYETARGFFIIDAMARGKSRLEEIVKLKQRYPSLSFGVSSLPQDETPGG-ASVVCEYAGRVWY 331 (771) Q Consensus 257 ~F~----~~~~~~n~~Gs~~aarG~yI~d~~~~~~s~~~~~~~~~~~~p~~~~~t~~~p~d~~~g~-~t~v~~~aGRv~y 331 (771) .|+ |..|... +.|.|.+.+..-... .-|. ..+.|-++ ..|+ |++|+=|-+|+++ T Consensus 479 g~~~~tmP~~l~~~-------~~g~f~~~~~~w~~r---~vGd-~~tnp~ps----------f~g~~is~v~f~q~RL~f 537 (976) T protein:vir:10 479 EFDKGTMPIQLVRQ-------ANGTFTVSQATWQNA---EVGD-ELTNPNPS----------FVGKTINQLVFFRNRLVF 537 (976) T ss_pred ccccccccEEEEec-------ccCeEEeeecccccc---ccCC-cccCcCce----------ecccccceEEEEcceEEE Confidence 111 2222222 333343333221100 0111 11222222 2233 5889999999999 Q ss_pred eeecceeecccccCCcccceeEEEeeecchhhccccccCCCCcCchhhhhhhcCCCEEeecC--CCceeEEEeecceeEE Q lcl|Aclame:pro 332 AGFSGQIIDGDDQSPRLVSYILFSQLVDSPADIVNCYQDGDPTSTEEPELVDTDGGFIRIEG--AHDIINLVNVGSAVMV 409 (771) Q Consensus 332 ~g~~~~~~~~~~~~p~~~~yv~fSqli~s~~~lg~CyQ~~DPts~~~~dl~dtDGG~I~I~g--a~~Iv~mv~~~ssLlV 409 (771) ++ |. +|++||.=| |.+=.|.+.. .+.|+|--.+.+-+ ...|.+|+++++.|++ T Consensus 538 ~s------------~~---~v~~Srtgd--------~~nF~~~t~~--~~~DdD~I~~~~ss~~~~~i~~~v~~~~~L~l 592 (976) T protein:vir:10 538 LS------------DE---NVIMSRPGE--------FFNFWSKTAT--TFTPQDVIDLSCSSTYPAIVYDGIQVNAGLLL 592 (976) T ss_pred ec------------CC---eEEEEecCC--------cccccccccc--CCCCCccEEEEecCCcceeeEEEEecCCcEEE Confidence 76 22 699988522 2222344322 55677877766654 3578999999999999 Q ss_pred EecceEEEEEecccceeeecceeeeeeeeeeecCccceEEeCCeEEEEecCc----eEEecccc-cCcccccccCchhhh Q lcl|Aclame:pro 410 VAANGIWMIQGGSDYGFTATNYLVTKISEHGCSSPNSVVVVDNSFMYWGDDG----IYHLTRNQ-YGDYVANNLTEKTIQ 484 (771) Q Consensus 410 ft~nGVWal~G~S~~~fsAt~y~V~KISd~GcvspnSIV~id~aVvYwSDsG----I~~L~~ne-~g~~ss~nLte~tIq 484 (771) ||..|-|.|.|+++ .+++++..+.++|..+|.+-=.=+.+|++++|.+.+| +++++.+. ..-..+++||.. ++ T Consensus 593 ~T~g~e~~lsg~~~-~lTP~t~~i~~~s~~~~~~~v~Pv~vG~~v~Fv~~~g~~~r~~~~~~~~~~~~~~~~dlt~~-~~ 670 (976) T protein:vir:10 593 FTKNQQFMLTTDSD-ILSPETAKINAVSSYNFNEKTHPVSLGTTVAFIDNANQFTRFFEMSNVVRQGEPDVVDQSKV-IS 670 (976) T ss_pred EecCceEEEecCCc-eecceeEEEEEEEeeeccCCCccEEeCCeEEEEecCCCeEEEEEEeecccccccchhHHHHH-hh Confidence 99999999988654 8999999999999999998888899999999999987 77787774 222335556554 44 Q ss_pred hhhhhcChhHhcceeEEEEeeccEEEEEecccccccccccceeEE---ecccccceeeeecceeccceeeeeeeeeeCCc Q lcl|Aclame:pro 485 KYYEKIPSDAILNATGFYDSYDKKVKWLYNTVLDGRTEPVTELVF---DLALGAFYPSKIGSLTAGRLPIPVGSVKIPPY 561 (771) Q Consensus 485 t~~~sip~~~k~~~~g~yD~~~~~v~wly~e~~d~~~~y~tElVf---~L~~~afY~~ki~s~~ags~~~~i~s~~vp~y 561 (771) .|..+ ..+ ...|=.-+..+.|.-. +-+..+.=+++. +..-.||.+|.+. |....++ . ++.. T Consensus 671 ~l~~g---~~~---~~a~~~~~~~vv~~~~---~~g~l~~~ty~~~~~eq~v~aWsr~~~~----G~v~sv~-~--i~D~ 734 (976) T protein:vir:10 671 RLLDK---NIS---LVSVSRENSVVFFSQK---DTDKIYCFRYFTSGEKRLLQAWTTWTIT----GNIQYHC-M--LDDA 734 (976) T ss_pred hhcCC---ceE---EEEEcCCCcEEEEEEc---CCCEEEEEEEeecCCceeEEeeEEEecC----CcEEEEE-E--eCCe Confidence 44432 111 1222223334444432 222211100111 2334699999663 3322221 1 1111 Q ss_pred --eeeecce---EEee----c--------ccceeeccceeeeeeeeeeeeeeeeEEEEEE----------------EcCC Q lcl|Aclame:pro 562 --KLVETGE---EVTV----A--------SEQVTATGELVTVKVSTRSPVIRETKYIIVE----------------KLSS 608 (771) Q Consensus 562 --~~~~t~~---~V~v----~--------~~~vv~~~~~v~~~~~~~~~~~r~~~y~~~~----------------~~g~ 608 (771) -++...- .++. . .+..... +.+...+..+.....+.... -.+. T Consensus 735 ly~vV~r~~~g~~~r~~e~~~~~~~~~~~~~~~~~~----~~~~~~~~~lD~~~~~~~~~~t~~~~t~~t~~~~~~~~~~ 810 (976) T protein:vir:10 735 LYVVTRNNNKDQIVKYSLKLDDAGHFVTDTQGTTST----DDDSIYRVHLDHSSSVTAASNTYNTTTIKTTIPKPNGYES 810 (976) T ss_pred EEEEEEecCCeEEEEEEEEECCccceeeeccCcccc----ccCCcceeeeccceEEEeccccccCCceeEEeecCccccC Confidence 1111100 0000 0 0000000 00111111111111111100 0001 Q ss_pred CceEEEeeecCCchhhcc-----ccCC--ccc--chh-HhhhhhccccccceeeeecceEEEEEeee-cceeEecccceE Q lcl|Aclame:pro 609 PMRISFGGYTDEEFVDWK-----SVDG--IGV--DAP-AYLLTGYLAGGDYQREKFVPYITFHFKKT-EDGFVEDAEGDW 677 (771) Q Consensus 609 ~~~~sF~~~~~d~F~Dw~-----~~~~--~gv--d~~-sy~~tgy~~~gd~~r~K~~pyl~~~~~~T-Ed~~t~d~~g~~ 677 (771) .+++- .+..+...+-+ .+.| +.+ |.+ +-+.-|+.+.-.+. -+.++|++. .++..-+..|.- T Consensus 811 ~~~~~--~~~~d~~~~~~~~~~~~v~g~~i~l~g~~~~~~v~VGl~Y~s~~~------~~~~~i~~~~g~~~~~~~~gRl 882 (976) T protein:vir:10 811 TKQLV--AYDTDAGNDLGRYALVTVSGSNLEIPGNWSNNSFIIGYLYEMDVQ------LPTLYVTQQVGDKYRSDAKSSL 882 (976) T ss_pred ceeEE--EEecccCcccccceeeeecCCeeEecCCCCCCeEEEeeeeEEEEe------ecceeEEeCCCCcccccceeeE Confidence 11111 11111100000 0000 000 000 01112222221111 112233332 222222222210 Q ss_pred EEcCccceEEEEEEeeccCCCCCc-ccc-hheeeeeeehcccCCCCcCCCCcceeeeec---cccceeeeEEEEEEEecC Q lcl|Aclame:pro 678 TPTNQSSCMVQSQWSWTNSPASNK-WGR-TWQAYRFRRHFFPDNIDNQFDDGNSVVETK---SRLRGSGKVLSLYITTEP 752 (771) Q Consensus 678 ~~~n~SScl~~~~w~~s~~~~~~k-w~~-~~q~Yr~~r~~~p~~~~~~f~~~~~VV~TK---~~~RG~G~~~~~~f~se~ 752 (771) -+.++.+++.+++.-.- ..+ -..-|+..+.+.+ .......+-.+.+++ --+||.++-.++.++++. T Consensus 883 -------~i~r~~~~~~~tg~~~v~v~~~~~~~~~~~~~~~~--~~~~~~~~~pl~~~~~~~vP~~~~~~~~~v~i~~d~ 953 (976) T protein:vir:10 883 -------IVHRIKFSFGPLGVYSTTIQRDGKPDFTETKELGL--AGVVGASRLPIVPEVIETVPCYERNTNLKVNVKSEH 953 (976) T ss_pred -------EEEEEEEEeecccceEEEEcCCCCccccccccccc--cCcccccccceecCcEEEEEeccCCceeEEEEEECC Confidence 02255555555432100 000 0122332221111 111111222222222 246899999999999999 Q ss_pred CCceEEEeEEEEEEeecCC Q lcl|Aclame:pro 753 KKNLHIYGWSMLVDVNGTV 771 (771) Q Consensus 753 ~KD~~llG~~~~~~~~g~~ 771 (771) --.|+||+.+++.+.+=.- T Consensus 954 PlP~tilsi~~eg~yn~r~ 972 (976) T protein:vir:10 954 PAPATLYSLAWEGDFTNRF 972 (976) T ss_pred CCceEEEEEEEEEEeccce Confidence 9999999998887764433 No 39 >protein:vir:105525 Length: 472 # NCBI annotation: phage DNA stabilization protein # Family: family:all:1540 # MgeID: mge:1463 # MgeName: phiSG1 # Cross-refs: genbank:acc:YP_516194;genbank:gi:89885997;genbank:GeneID:3964385 Probab=97.89 E-value=1.3e-05 Score=47.46 Aligned_cols=405 Identities=14% Similarity=0.081 Sum_probs=180.6 Q ss_pred ceeeeeccCCC-------CcceEEEccccccCCcCcchheeeccccccCCCcccccccchhhhhccccccccCCCcc-e- Q lcl|Aclame:pro 208 VPRVTWHSNEP-------SDPIVTFRSAASGKFPSNSDSVNLALSKRADVEPSTTDRFRAEDIVLNPIGTYETARGF-F- 278 (771) Q Consensus 208 ~~~~~~~s~s~-------~~~vv~~~~~~~G~yPSnaD~~n~~~~~~s~~e~~~~~~F~~~~~~~n~~Gs~~aarG~-y- 278 (771) -|++-...-++ .|.+-++ -+-.||.-++.-|.-..-++.+ +..+| ...-| +.||. | T Consensus 1 m~~~q~pl~~g~~~~~~~~~~~~~l---pvN~y~~p~~~~~ss~~lr~~P---G~~~~------~~~~g---~~RG~~~~ 65 (472) T protein:vir:10 1 MAIMQLPLLRGLGKARDDADYIDAL---PVNMLATPKPVLNASGYLRSFP---GITHK------AEVAG---VSRGVQYN 65 (472) T ss_pred CCceeeecccccccCccccCceeee---eeeeeeccccccccceeecccC---Cceee------cCCCc---ccceeEee Confidence 22221211111 1111100 0112333233322111111111 11111 11112 55664 2 Q ss_pred EE-EeeecCcccceeeeecccccccccceeeec-ch---------------------------------------hhccC Q lcl|Aclame:pro 279 II-DAMARGKSRLEEIVKLKQRYPSLSFGVSSL-PQ---------------------------------------DETPG 317 (771) Q Consensus 279 I~-d~~~~~~s~~~~~~~~~~~~p~~~~~t~~~-p~---------------------------------------d~~~g 317 (771) ++ ++.++-.-..+= +-. +.-++..|+ |- +...+ T Consensus 66 ~~~~~lY~V~G~~Ly-----~v~-~~vG~iagsg~VsMa~~~~~q~v~v~g~~~~y~y~g~~~t~~~~~~~~~it~~dl~ 139 (472) T protein:vir:10 66 THEKTVYRGLGNQLY-----KGH-KPIADLAGKGRISMAFSRNSQAVVAAGKMTLYRYDGTVKTLENWPKEKKYTQYDIG 139 (472) T ss_pred eeCCeEEEEecceEE-----EEE-eeeeeecccccEEEEecCCceEEEEecceeEEEeccchhhhhhccccccCCccccC Confidence 11 111111111100 000 001122121 11 11122 Q ss_pred CceeeeeecceeEEeeecceeecccccCCcccceeEEEeeecc--hhhccccccCCCCcCchhhhhhhcCCCEEeecCCC Q lcl|Aclame:pro 318 GASVVCEYAGRVWYAGFSGQIIDGDDQSPRLVSYILFSQLVDS--PADIVNCYQDGDPTSTEEPELVDTDGGFIRIEGAH 395 (771) Q Consensus 318 ~~t~v~~~aGRv~y~g~~~~~~~~~~~~p~~~~yv~fSqli~s--~~~lg~CyQ~~DPts~~~~dl~dtDGG~I~I~ga~ 395 (771) ++..||=..||... .-- ++. .+|+|.|-|- ++. -||.. +.--+.| T Consensus 140 ~~~~v~~~dGyfV~-~~~----gt~--------~~~iS~L~d~s~~~~-------~~~Fa---tAE~~pD---------- 186 (472) T protein:vir:10 140 NVRDMCHLRGRYVW-CKD----GSD--------IFGVTDLEDESHPDR-------YRALY---RAESQPD---------- 186 (472) T ss_pred CceeEEEeCceEEE-eec----CCc--------eEEEeecCCcccCCc-------cccee---eecCCCC---------- Confidence 33333333333211 000 000 1556666442 121 13321 1122345 Q ss_pred ceeEEEeecceeEEEecceE--EEEEecccceeee---c-ceeeeeeeeeeecCccceEEeCCeEEEEecCceEEecccc Q lcl|Aclame:pro 396 DIINLVNVGSAVMVVAANGI--WMIQGGSDYGFTA---T-NYLVTKISEHGCSSPNSVVVVDNSFMYWGDDGIYHLTRNQ 469 (771) Q Consensus 396 ~Iv~mv~~~ssLlVft~nGV--Wal~G~S~~~fsA---t-~y~V~KISd~GcvspnSIV~id~aVvYwSDsGI~~L~~ne 469 (771) .|+++..+...|++|.+.-+ |.+.|+++..|-- + .+-+ ..||.+|.||...|++++|+|...--...... T Consensus 187 ~Ivgi~~~~~~i~lfG~~TiEvw~ntG~a~fpf~r~~~~pg~~i----q~Gcaa~~sv~~~~~s~~~l~~d~~g~~~V~~ 262 (472) T protein:vir:10 187 GIIGIDSWRDFIVCFGASTIEYFSLTGAADGQSAIYAAQPALMV----EKGIAGTHCKTRLGDAHVIISHQATGAPSVFL 262 (472) T ss_pred ceEEEEeeccEEEEEeccceEEEEecCCCCcceeeeccCcccee----eecccCchhhhhhCceEEEEecCCCcceEEEE Confidence 89999999999999999998 9999988863321 1 1112 36999999999999999999999754455555 Q ss_pred cCcccccccCchhhhhhhhhcChhHhcceeEEEEeeccE--EEEEecccccccccccceeEEecccccceeeeecceecc Q lcl|Aclame:pro 470 YGDYVANNLTEKTIQKYYEKIPSDAILNATGFYDSYDKK--VKWLYNTVLDGRTEPVTELVFDLALGAFYPSKIGSLTAG 547 (771) Q Consensus 470 ~g~~ss~nLte~tIqt~~~sip~~~k~~~~g~yD~~~~~--v~wly~e~~d~~~~y~tElVf~L~~~afY~~ki~s~~ag 547 (771) .+..+++-++-..|+..+.+++.+.+..+.+++=.++.. +.+-+|. . -+|||+.++-|+...... ..| T Consensus 263 ~~g~q~~rIST~aIE~~i~~y~~~e~~dA~~~s~~~eGH~fy~LtfP~----~-----Tw~yD~at~~~~~~w~~~-~~g 332 (472) T protein:vir:10 263 INQAQATSIATATIEKILRSYTHDELASAVMETVRFDSHELVLIHLSR----Q-----VLCYDAAANQNGLQWSLL-KTG 332 (472) T ss_pred ccCceEEEecCHHHHHHHHhCCcccccceeEEEEEeCCeEEEEEEcCC----e-----eEEEeccCCccceeeeee-ecC Confidence 555678888888899999999988888888777566666 3344441 1 389999999886642111 122 Q ss_pred ce-eeeeeeeeeCCceeeecceEEeecccceeeccceeeeeeeeeeeeeeeeEEEEEEEcCCCceEEEeeecCCchhhcc Q lcl|Aclame:pro 548 RL-PIPVGSVKIPPYKLVETGEEVTVASEQVTATGELVTVKVSTRSPVIRETKYIIVEKLSSPMRISFGGYTDEEFVDWK 626 (771) Q Consensus 548 s~-~~~i~s~~vp~y~~~~t~~~V~v~~~~vv~~~~~v~~~~~~~~~~~r~~~y~~~~~~g~~~~~sF~~~~~d~F~Dw~ 626 (771) .. -.-.+..+++ .... ..+|..+. |.-+++.|..|++++=.. T Consensus 333 ~~~~~~Ra~~~~~-----~~g~---------------~~vGD~~n---------------g~l~~ld~~~~td~g~pi-- 375 (472) T protein:vir:10 333 FYHAPYRGIDFMF-----ADHH---------------LTCGDKND---------------SLLGQLDFASSAQYEKPQ-- 375 (472) T ss_pred CccCceEEEEEEE-----eCCe---------------EEEEEcCC---------------CeEEEEcCcCcCCCCcee-- Confidence 21 0111221222 2222 34555554 555556665666543322 Q ss_pred ccCCcccchhHhhhhhccccccceeeeecceEEEEEeeecceeEecccceEE-EcCccceEEEEEEeeccCCCCCcccch Q lcl|Aclame:pro 627 SVDGIGVDAPAYLLTGYLAGGDYQREKFVPYITFHFKKTEDGFVEDAEGDWT-PTNQSSCMVQSQWSWTNSPASNKWGRT 705 (771) Q Consensus 627 ~~~~~gvd~~sy~~tgy~~~gd~~r~K~~pyl~~~~~~TEd~~t~d~~g~~~-~~n~SScl~~~~w~~s~~~~~~kw~~~ 705 (771) .|...-|+++.+=.+ +-|.+.++. -..+..= ++--+||.++ +.-|..| T Consensus 376 -----------------------~~~~~tp~~~~~n~R-----vfd~el~~~tGvg~~~~--~v~L~wSddg-~~~~~~~ 424 (472) T protein:vir:10 376 -----------------------EHVLYTPLFKADNAR-----VFDFELEASTGVAHIAD--RLFLSATADG-LHFGREQ 424 (472) T ss_pred -----------------------EEEeeccceecCCCe-----EEEEEEEeeCCcCccCc--eEEEEEeccc-cccchhH Confidence 233333444432221 101000000 0011111 2344555533 3334333 Q ss_pred heeeeeeehcccCCCCcCCCCcceeeeeccccceeeeE-----EEEEEEecCCCceEEEeEEEE Q lcl|Aclame:pro 706 WQAYRFRRHFFPDNIDNQFDDGNSVVETKSRLRGSGKV-----LSLYITTEPKKNLHIYGWSML 764 (771) Q Consensus 706 ~q~Yr~~r~~~p~~~~~~f~~~~~VV~TK~~~RG~G~~-----~~~~f~se~~KD~~llG~~~~ 764 (771) . +-++.....+ ++.+-|-=|+| ++||+.+-..-++-|+|=-|+ T Consensus 425 ~---------~~~~g~~~~~-------~r~~w~RlG~ar~~vgf~~rv~~s~pv~~~~~~a~~e 472 (472) T protein:vir:10 425 M---------INQNAPFAYD-------RRILWRRMGRVRKNLGFKVRVITSSPVTLSGCQIRME 472 (472) T ss_pred H---------HhhcCccchh-------heeeeheeeccccccceEEEEEEecccccccceeeeC Confidence 2 1223332211 12223222332 335555554444444444443 No 40 >protein:vir:108312 Length: 458 # NCBI annotation: hypothetical protein # Family: family:all:1540 # MgeID: mge:2007 # MgeName: BA3 # Cross-refs: genbank:acc:YP_001552278;genbank:gi:160700603;genbank:GeneID:5758828 Probab=97.85 E-value=1.5e-05 Score=47.08 Aligned_cols=375 Identities=17% Similarity=0.174 Sum_probs=174.4 Q ss_pred hhhhccccccccCCCcceEEE------eeecCcccceeeeecccccccccceeeec-chhhccCCce-eeeee------- Q lcl|Aclame:pro 261 EDIVLNPIGTYETARGFFIID------AMARGKSRLEEIVKLKQRYPSLSFGVSSL-PQDETPGGAS-VVCEY------- 325 (771) Q Consensus 261 ~~~~~n~~Gs~~aarG~yI~d------~~~~~~s~~~~~~~~~~~~p~~~~~t~~~-p~d~~~g~~t-~v~~~------- 325 (771) =..-++|.|+|.+ +|. +.| .+.+-+ +-.+.+..=.+|.|+ .--+..+.|. +++.- T Consensus 1 m~~~~ip~gsy~a-~~~-~~daq~~VN~yp~~~--------e~g~ss~~l~~tPGl~~f~~~~~~~~~g~~~~~g~ly~v 70 (458) T protein:vir:10 1 MVQRQIPLVATTA-EGD-VSGQEILVNVYPRKS--------DGGKYPFTLRHTPGLAFFCELPTFPVMAMHQNGSRAFAV 70 (458) T ss_pred Cceeeeceeeeec-ccc-cccceeeeeeeeecc--------cccccccceEecCCceeeecCCCCceeeEEecCCEEEEe Confidence 1234455555432 332 222 222110 011222222223333 2122223332 11111 Q ss_pred ----------------------cceeEEeeecceeecccccCCcccceeEEEeeecchhhccccccCCCCcCchhhhhhh Q lcl|Aclame:pro 326 ----------------------AGRVWYAGFSGQIIDGDDQSPRLVSYILFSQLVDSPADIVNCYQDGDPTSTEEPELVD 383 (771) Q Consensus 326 ----------------------aGRv~y~g~~~~~~~~~~~~p~~~~yv~fSqli~s~~~lg~CyQ~~DPts~~~~dl~d 383 (771) .|||..+-=.-++...+. . ++|.|=..+ +-+ -|..|+.=.-..++.= T Consensus 71 ~g~~LY~V~~~~~~~~iG~i~gsg~VsMa~ng~q~vi~~G---~-~gY~yd~at-~~~------~~i~d~~~~~~~~v~~ 139 (458) T protein:vir:10 71 TPRDMYEISKDGTYKRLGSVDFKGRVVMEDNGKQIVMVDG---E-KGYYYDSET-EIV------QEIKAEGFYPASTVTY 139 (458) T ss_pred eCceEEEEeCCceEEEEecccCceeEEEeeCCcEEEEEEC---C-eEEEEeecc-cEE------EeccCccccCcceEEE Confidence 122221100001000000 0 234331111 000 0111221122222222 Q ss_pred cCCCEEee--------------------------cCCCceeEEEeecceeEEEecceE--EEEEecccceeeecceeeee Q lcl|Aclame:pro 384 TDGGFIRI--------------------------EGAHDIINLVNVGSAVMVVAANGI--WMIQGGSDYGFTATNYLVTK 435 (771) Q Consensus 384 tDGG~I~I--------------------------~ga~~Iv~mv~~~ssLlVft~nGV--Wal~G~S~~~fsAt~y~V~K 435 (771) -||=+|-. -..-.|+++..+...|++|.+.-+ |...|+++.- |+.++ T Consensus 140 ~dGy~V~~~~g~~~~~is~L~d~s~d~l~fa~Ae~~pD~iv~i~~~~~~i~~fG~~TiEvw~ntG~a~fp-----y~r~~ 214 (458) T protein:vir:10 140 QDGYFIFDRKGTGQFFISELLDVAFDPLDFATAEGQPDPLLAVLSDHREVFMFGQETIEVWYNSGAADFP-----FERNQ 214 (458) T ss_pred eCcEEEEEeeCCCEEEEEecCcceeCcceeeeecCCCCceEEEEeeccEEEEEeccceEEEEecCCCCcc-----eeecc Confidence 22222211 112379999999999999999988 9999988863 43333 Q ss_pred ee--eeeecCccceEEeCCeEEEEe-cCceEEecccccCcccccccCchhhhhhhhhcChhHhcceeEEEEeeccEE-EE Q lcl|Aclame:pro 436 IS--EHGCSSPNSVVVVDNSFMYWG-DDGIYHLTRNQYGDYVANNLTEKTIQKYYEKIPSDAILNATGFYDSYDKKV-KW 511 (771) Q Consensus 436 IS--d~GcvspnSIV~id~aVvYwS-DsGI~~L~~ne~g~~ss~nLte~tIqt~~~sip~~~k~~~~g~yD~~~~~v-~w 511 (771) .. ..||.+|.||...+++++|++ |.-||+|++- .++-++-..|+..+.++..+. +.+++=.++... +. T Consensus 215 ga~i~~Gcaa~~sv~~~~~t~~~l~~d~~Vy~l~g~-----~~~rIST~aIE~~i~sy~~~d---a~a~t~~~eGH~fy~ 286 (458) T protein:vir:10 215 GAFIEKGIGAPYSVAKTNNTVYFIGSDLMIYQITGY-----TPVRISTHAVEQTLKGVNLSD---AFAYTYQSEGHLFYV 286 (458) T ss_pred cceeeecccCcchhhhhCceEEEEcCCeEEEEecCc-----eeEEeeCHHHHHHHhcCChhh---eEEEEEEecCeEEEE Confidence 22 489999999999999999999 5556666544 455556667777777775444 555543455553 22 Q ss_pred E-ecccccccccccceeEEecccccceeeeecceeccceeeeeeeeeeCCceeeecceEEeecccceeeccceeeeeeee Q lcl|Aclame:pro 512 L-YNTVLDGRTEPVTELVFDLALGAFYPSKIGSLTAGRLPIPVGSVKIPPYKLVETGEEVTVASEQVTATGELVTVKVST 590 (771) Q Consensus 512 l-y~e~~d~~~~y~tElVf~L~~~afY~~ki~s~~ags~~~~i~s~~vp~y~~~~t~~~V~v~~~~vv~~~~~v~~~~~~ 590 (771) | +| +++ .+ .|||.+++.|-.- +|.... + -....+++ .... ..+|..+ T Consensus 287 LtfP-~a~-~T-----w~yD~~t~~Wher--~Sg~~~--~-~Ra~~~v~-----~~g~---------------~~vGD~~ 334 (458) T protein:vir:10 287 LTIP-GKN-LT-----WCYDISSGSWHVR--QSYQFD--R-HVSNNSIY-----FDQK---------------TLVGDFQ 334 (458) T ss_pred EECC-CCC-ce-----eEEecccccceee--ccCCCC--c-eEEEEEEE-----eCCe---------------EEEEEcC Confidence 3 33 111 11 5999999998764 232122 1 11121221 1122 3344444 Q ss_pred eeeeeeeeEEEEEEEcCCCceEEEeeecCCchhhccccCCcccchhHhhhhhccccccceeeeecceEEEE--------- Q lcl|Aclame:pro 591 RSPVIRETKYIIVEKLSSPMRISFGGYTDEEFVDWKSVDGIGVDAPAYLLTGYLAGGDYQREKFVPYITFH--------- 661 (771) Q Consensus 591 ~~~~~r~~~y~~~~~~g~~~~~sF~~~~~d~F~Dw~~~~~~gvd~~sy~~tgy~~~gd~~r~K~~pyl~~~--------- 661 (771) . |.-.++.|..|++++ ++ +.|.-.-|+++-. T Consensus 335 n---------------g~ly~ld~~~~td~g--~~-----------------------i~~~~~~p~~~~~~~rl~~~~~ 374 (458) T protein:vir:10 335 N---------------GRIYIMADNYYTDDG--DP-----------------------VVREFILPVVNNGREFLTVDSL 374 (458) T ss_pred C---------------CeEEEEcccCcCCCC--ce-----------------------eeeeeeccceeCCCCeEEEEEE Confidence 3 333334333343321 11 1222222333210 Q ss_pred Ee--eecceeEecccceEEEcCccceEEEEEEeeccCCCCCcccchheeeeeeehcccCCCCcCCCCcceeeeeccc--c Q lcl|Aclame:pro 662 FK--KTEDGFVEDAEGDWTPTNQSSCMVQSQWSWTNSPASNKWGRTWQAYRFRRHFFPDNIDNQFDDGNSVVETKSR--L 737 (771) Q Consensus 662 ~~--~TEd~~t~d~~g~~~~~n~SScl~~~~w~~s~~~~~~kw~~~~q~Yr~~r~~~p~~~~~~f~~~~~VV~TK~~--~ 737 (771) -+ +|=-|.++| +-|-=++...|+ ++ .+.-|++++.+=++-| .+.++ |+.+ - T Consensus 375 el~~~tGvg~~~~--------~~~~p~~~l~~S--~d-~g~~~s~~~~~~~lg~-------~gey~-------tr~~~~r 429 (458) T protein:vir:10 375 ELDLSSGVGLTVG--------QGSDPELRVYFS--KD-NGNEYSQNFKVGKIGR-------KGEFL-------TRAKVNR 429 (458) T ss_pred EEEEecceeeeeC--------CCCCceEEEEEe--eC-CCcccchhHHHhhcCC-------cchhh-------hhhhhhh Confidence 00 221222222 223346667666 44 4888998765533222 11111 3333 3 Q ss_pred ceeeeEEEEEEEecCCCceEEEeEEEEEE Q lcl|Aclame:pro 738 RGSGKVLSLYITTEPKKNLHIYGWSMLVD 766 (771) Q Consensus 738 RG~G~~~~~~f~se~~KD~~llG~~~~~~ 766 (771) .|++|---||++--..-+.-|+|-.+.++ T Consensus 430 lG~ar~rvf~v~~s~p~~~~l~ga~~~~r 458 (458) T protein:vir:10 430 FGCARQFTFKVEISDPIPVDIGGAWVEVR 458 (458) T ss_pred hccCcceEEEEEEecchhhcceeeeEEeC Confidence 46666555777777778888999888777 No 41 >protein:vir:352 Length: 536 # NCBI annotation: hypothetical protein # Family: family:all:3197 # MgeID: mge:9 # MgeName: Mx8 # Cross-refs: genbank:acc:NP_203466;genbank:gi:15320622;genbank:GeneID:921729 Probab=96.21 E-value=0.00087 Score=37.37 Aligned_cols=506 Identities=16% Similarity=0.148 Sum_probs=237.6 Q ss_pred Cchhhhh--hhhccccceeeeccchhcCCCCccccceeeeeccccchhhhhcceeecCCceeecceeeccCceeeeeech Q lcl|Aclame:pro 1 MAKTTNA--AEFNTFVGGLITEASPLTFPQNASIDEVNFILNRDGSRNRRNGMDFENGATKVVCNTLVPADGTIAVTSHN 78 (771) Q Consensus 1 Ma~~~~~--~e~ntFv~GliTEan~Lt~P~nas~De~N~~L~k~G~r~RR~Gl~~E~s~~~~l~~~~~~s~~~~~vt~~~ 78 (771) |++++.+ +.+--+++||||-.+...-|+..++=-+||.=...|.|-||=-+..-++. T Consensus 9 ~~~~~~~~~~~~pAPv~G~~t~~~~A~m~~~~A~vldN~fpt~~g~r~R~G~~~~at~~--------------------- 67 (536) T protein:vir:35 9 VPPPPSIQEAHLPAPVGGLNTVSAGSAMPVSDCLQGFNLIASELGLRSRLGYREWCTGL--------------------- 67 (536) T ss_pred CCCCccceeeeeCccccceeccchhhcCCCCceEEEeecCCChhhhhhhccchhHhcCC--------------------- Confidence 4444443 34567899999999999999999999999999999999987443222200 Q ss_pred hhhccCccceeEEEE----EEccEEEEEecCCceeeheeeEeeecceeCCCcceeeEEeeEEEEEEcCCcceEEEeccCC Q lcl|Aclame:pro 79 WENAGGEVGRWISLV----QVGTELKFFQTTGETLSEGNFYNYQFVNMSPSHKLSYAVVDGLLVVANGSRDIYVFEYDSG 154 (771) Q Consensus 79 W~~~~g~v~~~~l~~----q~g~~l~~~d~t~~~lSn~~l~~~~fv~~sP~~~is~~~v~G~lVva~~~~~~~i~~~~~~ 154 (771) ++++ ..++.. ..|-.=|.|+.+. .+|.=|++|+.|=.+.. T Consensus 68 ----~~~v-~s~~~~~~~~~~Ga~~klf~at~---------------------------~~i~dvT~pa~p~~~~~---- 111 (536) T protein:vir:35 68 ----GVPA-RSTLPFAGSAKSGAANRLFQTTS---------------------------EGIWDVSASSQTPTQVL---- 111 (536) T ss_pred ----ccce-EEeeeeeeccccCcceeEEEecc---------------------------cceeeeecCCCCcceEE---- Confidence 0000 011111 1221112222221 12333344443210000 Q ss_pred ceeeEEEEEEEEEeeeeccccccCcceeccccccCCCccCchhheeeeeccccceeeeeccCCCCcceEEEccccccCCc Q lcl|Aclame:pro 155 SVSVTTKRLLVRDLFGVQDIVNGVDLRQGNDIATRPTVQTNAHIYNLRNQTFGVPRVTWHSNEPSDPIVTFRSAASGKFP 234 (771) Q Consensus 155 s~~~~t~~l~iRd~~~l~d~~~g~~~~~~~~~~~rpttlS~eh~YnL~NqgW~~~~~~~~s~s~~~~vv~~~~~~~G~yP 234 (771) .++++. |+ + +....+|| +.| T Consensus 112 -------------~~g~~~----------------g~---------~----------------~~w~~v~~------~~~ 131 (536) T protein:vir:35 112 -------------TFGDQT----------------GD---------A----------------GFGVSHAF------VTQ 131 (536) T ss_pred -------------EeccCC----------------Cc---------e----------------eeEEEEEe------cCC Confidence 122221 00 0 00112332 222 Q ss_pred CcchheeeccccccCCCcccccccchhhhhccccccccCCCcceEEEeeecCcccceeeeecccccccccceeeecchhh Q lcl|Aclame:pro 235 SNSDSVNLALSKRADVEPSTTDRFRAEDIVLNPIGTYETARGFFIIDAMARGKSRLEEIVKLKQRYPSLSFGVSSLPQDE 314 (771) Q Consensus 235 SnaD~~n~~~~~~s~~e~~~~~~F~~~~~~~n~~Gs~~aarG~yI~d~~~~~~s~~~~~~~~~~~~p~~~~~t~~~p~d~ 314 (771) ++...+ +++-.+.+- +|+ |++.+- ++ ..-.+..++.--- T Consensus 132 gG~~l~--~~nG~~~~~-----~~~---------gt~~~w----------------~~---------v~~~t~~~~i~Gv 170 (536) T protein:vir:35 132 RGHFLF--YADETNGLF-----RYS---------ESTDTW----------------TA---------VAQGTGVGEIDGV 170 (536) T ss_pred CceEEE--EEEcCCCce-----Eee---------cccCch----------------hh---------cccCCcccccCCC Confidence 222222 121111100 111 111000 00 0000011111112 Q ss_pred ccCCceeeeeecceeEEeeecceeecccccCCcccceeEEEeeecchhhccccccCCCCcCchhhhhhhcCCCEEeecCC Q lcl|Aclame:pro 315 TPGGASVVCEYAGRVWYAGFSGQIIDGDDQSPRLVSYILFSQLVDSPADIVNCYQDGDPTSTEEPELVDTDGGFIRIEGA 394 (771) Q Consensus 315 ~~g~~t~v~~~aGRv~y~g~~~~~~~~~~~~p~~~~yv~fSqli~s~~~lg~CyQ~~DPts~~~~dl~dtDGG~I~I~ga 394 (771) ..-+++-|+.|.-|+|+-= +++-+ ++| ==+++.+..- .+.+. .-+-..||.+.--+. T Consensus 171 ~~~~l~~i~~~knRLffvq-----~~s~~--------awY-Lp~~av~G~A------~~f~l---g~~~~~GGsL~~~~s 227 (536) T protein:vir:35 171 NPANIVFVAVFKQRVWLVE-----RDTAR--------AWY-LPAGAIAGTA------QPFEM---GAQFRAGGHLVGLWN 227 (536) T ss_pred CcccceeeeeEeeeEEEEE-----eCCce--------EEE-eeccccccee------eeeec---cCccccCceEcccee Confidence 3457788999999999832 22222 566 1144444431 11110 112245665543221 Q ss_pred CceeEEEeeccee-----EEEecceEEEEEecccceeeecceeeeeeeeee---ecCccceEEeCCeEEEEecCceEEec Q lcl|Aclame:pro 395 HDIINLVNVGSAV-----MVVAANGIWMIQGGSDYGFTATNYLVTKISEHG---CSSPNSVVVVDNSFMYWGDDGIYHLT 466 (771) Q Consensus 395 ~~Iv~mv~~~ssL-----lVft~nGVWal~G~S~~~fsAt~y~V~KISd~G---cvspnSIV~id~aVvYwSDsGI~~L~ 466 (771) = -.+.+.+| +|-++-+|+ +++||+ ..+|+++.+..|.+.| -+.++.++.+++=+++.++.||..|+ T Consensus 228 W----S~~~G~Gl~d~~VfvSs~GeVa-VyqGsd-Ps~s~~Wsl~giy~IG~~pp~G~r~~i~~G~Dl~iit~dGivpls 301 (536) T protein:vir:35 228 W----TYDGGAGMDDSLVAISGGGDVA-IWQGTD-PASSATFGLRGVWSLGGSPPAGRRIATDYGGDVLVLSRLGVRPLS 301 (536) T ss_pred e----ccccCCCcceeEEEEecCCcEE-EEecCC-CCcccceeEEEEEEeccCCCCCceEEEeecCeeEeeecCCccchh Confidence 1 11222333 444454555 556677 6889999999999998 68899999999999999999999999 Q ss_pred ccccCccccc-ccCchhhhhhhhhcChhHhc----ceeEEEEeeccEEEEEecccccccccccceeEEecccccceeeee Q lcl|Aclame:pro 467 RNQYGDYVAN-NLTEKTIQKYYEKIPSDAIL----NATGFYDSYDKKVKWLYNTVLDGRTEPVTELVFDLALGAFYPSKI 541 (771) Q Consensus 467 ~ne~g~~ss~-nLte~tIqt~~~sip~~~k~----~~~g~yD~~~~~v~wly~e~~d~~~~y~tElVf~L~~~afY~~ki 541 (771) .-...+..+. -|+.. ||.+++..-..... ++. .| ..++....-.|... ... ...+|||+.+++|-+..- T Consensus 302 q~~q~d~~a~~~it~~-I~~~~~~~v~~~a~~~gWq~~-~~-P~~n~liV~~P~~~-g~~--~~~fV~N~~tgaW~~ftg 375 (536) T protein:vir:35 302 RLVAGEVDKDTYVTAK-VSNLFSALMLTRASLPGWSMQ-LH-PEDNALLVTVPTYP-GQP--TEQLVMALAGRAWFRYRD 375 (536) T ss_pred hhhhhhhhcccCCCcc-chhhHHHHHhhccCCCccEEE-Ec-cCCCeEEEEccCCC-CCC--ceEEEeecccCceeeecC Confidence 9877777665 34444 88888755444333 222 33 34555544554322 222 145899999999976643 Q ss_pred cceeccceeeeeeeeeeCCceeeecceEEeecccceeeccc-eeeeeeeeeeeeeeeeEEEEEEEcCCCceEEEeeecCC Q lcl|Aclame:pro 542 GSLTAGRLPIPVGSVKIPPYKLVETGEEVTVASEQVTATGE-LVTVKVSTRSPVIRETKYIIVEKLSSPMRISFGGYTDE 620 (771) Q Consensus 542 ~s~~ags~~~~i~s~~vp~y~~~~t~~~V~v~~~~vv~~~~-~v~~~~~~~~~~~r~~~y~~~~~~g~~~~~sF~~~~~d 620 (771) +. +... +..+=-.|+-+.+.. |-..-+.|.+.-+ -...|.++. ..+ .. T Consensus 376 w~--a~C~----~v~~~~LyFG~~dG~-v~~~da~v~g~D~~~~~ag~~I~---------~~~---------------~~ 424 (536) T protein:vir:35 376 LP--IYSS----AVWGGKLYFGTVDGR-VCVNDGYVDGVLLSEPSAFTPVQ---------WSL---------------LS 424 (536) T ss_pred Cc--ceEE----EEecCeEEEeecCCE-EEecccccCccccccCcCcceee---------ecc---------------cc Confidence 33 2211 111111222222222 2111111110000 000011111 000 01 Q ss_pred chhhccccCCcccchhHhhhhhccccccceeeeecceEEEEEeeecceeEecccceEEEcCccceEEEEEEeeccCCCCC Q lcl|Aclame:pro 621 EFVDWKSVDGIGVDAPAYLLTGYLAGGDYQREKFVPYITFHFKKTEDGFVEDAEGDWTPTNQSSCMVQSQWSWTNSPASN 700 (771) Q Consensus 621 ~F~Dw~~~~~~gvd~~sy~~tgy~~~gd~~r~K~~pyl~~~~~~TEd~~t~d~~g~~~~~n~SScl~~~~w~~s~~~~~~ 700 (771) -|.+.|+ .-.+++-..- ..+...+..|.|..-++--=| |.---+++ +..+.++ T Consensus 425 af~~~G~-----~~~K~~~~~r----~~~~s~~~~p~l~l~~~~d~D---------~~~p~~~~---------~~~~~~~ 477 (536) T protein:vir:35 425 AFTNLGS-----ARQKQVQLLR----PTLLSESATPSYEVQARYRYD---------FAELAPVS---------AMGGGSG 477 (536) T ss_pred chhhcCc-----hHHHHHHHhh----hhhhhccCCceEEEEEEEEec---------cCCCCCcC---------CCCCCcc Confidence 1222222 1111111111 123346677765544431101 11000122 1235556 Q ss_pred cc-cchheeeeeeehcccCCCCcCCCCcceeeeec-cccceeeeEEEEEEEecCCCceEEEeEEEEEEeecCC Q lcl|Aclame:pro 701 KW-GRTWQAYRFRRHFFPDNIDNQFDDGNSVVETK-SRLRGSGKVLSLYITTEPKKNLHIYGWSMLVDVNGTV 771 (771) Q Consensus 701 kw-~~~~q~Yr~~r~~~p~~~~~~f~~~~~VV~TK-~~~RG~G~~~~~~f~se~~KD~~llG~~~~~~~~g~~ 771 (771) +| ...|.--.+-. .-.|.++ --+=|.|.+++++++--..-|.+|.+-.+++++-|-+ T Consensus 478 ~Wd~s~Wd~~~Ws~--------------~~~v~~~~~s~~g~G~~is~~~~g~a~~~~~~~~~d~~~e~G~v~ 536 (536) T protein:vir:35 478 TWDGSTWDVDVWSG--------------EYQASQQVRGGTGVGVDLAIAIRGTAVARTVLVGIDILFTAGGLL 536 (536) T ss_pred cCCcccCCceecCC--------------cceeEeeeeEeccceEEEEEEEeeccccceEEEEEEEEEeecccC Confidence 66 33343222211 1122221 1255777777777777667799999999999998877 No 42 >protein:vir:93631 Length: 580 # NCBI annotation: Bcep22gp67 # Family: family:all:1544 # MgeID: mge:1470 # MgeName: Bcep22 # Cross-refs: genbank:acc:NP_944296;genbank:gi:38640373;genbank:GeneID:2658280 Probab=29.34 E-value=1.7 Score=19.37 Aligned_cols=485 Identities=15% Similarity=0.143 Sum_probs=199.0 Q ss_pred CchhhhhhhhccccceeeeccchhcCCCCccccceeeeeccccchhhhhcceeecCCceeecceeeccC-ceeeeeechh Q lcl|Aclame:pro 1 MAKTTNAAEFNTFVGGLITEASPLTFPQNASIDEVNFILNRDGSRNRRNGMDFENGATKVVCNTLVPAD-GTIAVTSHNW 79 (771) Q Consensus 1 Ma~~~~~~e~ntFv~GliTEan~Lt~P~nas~De~N~~L~k~G~r~RR~Gl~~E~s~~~~l~~~~~~s~-~~~~vt~~~W 79 (771) |+.=+ . +=.+|-+--.-|--+|+.++---.||-|++-+.+-.|+=..-.+.++ +.+++ .++----..| T Consensus 1 M~~i~----i-~~f~Ge~Prl~p~lLP~~~a~~a~n~~~~~G~i~P~~~~~~~~~~~~------i~~~~~~t~~~~~~~W 69 (580) T protein:vir:93 1 MTIIK----I-TGFSGEIPRLVPRLLPDTAAQNATNARLESGGLTPYRKPKFITRIST------IPAGQIETIYRNGETW 69 (580) T ss_pred CeeEe----e-cccccccccchhhhccccccceEEeeeccCCeeeeeeCchhhccccc------cCcCcceEEEecCcee Confidence 55422 1 11234444444556899999999999999988888887432222222 12222 1222111223 Q ss_pred hhccCccceeE-EEEEEccEEEEEecCCcee-eheeeEeeecceeCCCcceeeEEeeEEEEEEcCCcceEEEeccCCcee Q lcl|Aclame:pro 80 ENAGGEVGRWI-SLVQVGTELKFFQTTGETL-SEGNFYNYQFVNMSPSHKLSYAVVDGLLVVANGSRDIYVFEYDSGSVS 157 (771) Q Consensus 80 ~~~~g~v~~~~-l~~q~g~~l~~~d~t~~~l-Sn~~l~~~~fv~~sP~~~is~~~v~G~lVva~~~~~~~i~~~~~~s~~ 157 (771) ..--+.|++-= =+.| +.++|.+.---++ +.+.-++.. +..|++.++.+.+.| ++.+ .+.+ T Consensus 70 ~~w~~~V~~i~~PvA~--DRvy~Td~g~Pkvt~~g~sy~lg--VpaPs~Apt~~~~g~------g~l~-------~~~y- 131 (580) T protein:vir:93 70 MAWDKPVYAAPGPVAA--DRLYVMGDGAPKMIVGGTTYPLA--VPMPSAALTAATSGT------GTGD-------VFSR- 131 (580) T ss_pred EEeCCceeeecCcccc--ceeEEcCCcccceecCCcccccc--CCCcccCceeeecCC------CCcC-------ccce- Confidence 32222222100 0223 3666655442222 222222222 455555444444222 1111 0111 Q ss_pred eEEEEEEEEEeeeeccccccCcceeccccccCCCccCchhheeeeeccccceeeeeccCCCCcceEEEccccccCCcCcc Q lcl|Aclame:pro 158 VTTKRLLVRDLFGVQDIVNGVDLRQGNDIATRPTVQTNAHIYNLRNQTFGVPRVTWHSNEPSDPIVTFRSAASGKFPSNS 237 (771) Q Consensus 158 ~~t~~l~iRd~~~l~d~~~g~~~~~~~~~~~rpttlS~eh~YnL~NqgW~~~~~~~~s~s~~~~vv~~~~~~~G~yPSna 237 (771) .++. .++++ .+-- .+|..+|.+-..- -|++. . +.--+. ..=.+|- T Consensus 132 ~Yv~-------TfVt~----~GeE------S~PS~~S~~vtv~-~g~tV-----t----------Ls~~p~--p~~~~~i 176 (580) T protein:vir:93 132 VYVY-------TFVTG----FGEE------SEPSAISNEVNWQ-AGQTV-----T----------LSGFQA--APAGRNI 176 (580) T ss_pred EEEE-------EEEcC----CCCc------CCCcccccceeeC-CCCeE-----E----------EEecCC--CCCCCcc Confidence 1222 23332 1111 2233333332210 12211 0 000000 1111123 Q ss_pred hheeeccccccCCCcccccccchhhhhccccccccCCCcceEEEeeecCcccceeeeecccccccccceeeecchhhccC Q lcl|Aclame:pro 238 DSVNLALSKRADVEPSTTDRFRAEDIVLNPIGTYETARGFFIIDAMARGKSRLEEIVKLKQRYPSLSFGVSSLPQDETPG 317 (771) Q Consensus 238 D~~n~~~~~~s~~e~~~~~~F~~~~~~~n~~Gs~~aarG~yI~d~~~~~~s~~~~~~~~~~~~p~~~~~t~~~p~d~~~g 317 (771) +.+|++-+..+... + +-| =+....|..+.|.-|+.... +......-+|.. -+- T Consensus 177 ~~~RIYRS~tG~~g--t-dy~--------lVAel~Ag~~sF~Dd~s~a~----Lge~Lps~~~~~------------PP~ 229 (580) T protein:vir:93 177 TKQRIYRSQTSLSG--T-DLY--------FIAERDASAANFVDNVPLSD----QNEPLPSLEWNA------------PPD 229 (580) T ss_pred ceEEEEEeccCCCc--e-eEE--------EEeeeccceeeeeecccccc----cccccchhhccC------------cCC Confidence 33455553333210 0 000 01122234456666554322 111111111211 112 Q ss_pred CceeeeeecceeEEeeecceeecccccCCcccceeEEEeeecchhhccccccCCCCcCchhhhhhhcCCCEEeecCCCce Q lcl|Aclame:pro 318 GASVVCEYAGRVWYAGFSGQIIDGDDQSPRLVSYILFSQLVDSPADIVNCYQDGDPTSTEEPELVDTDGGFIRIEGAHDI 397 (771) Q Consensus 318 ~~t~v~~~aGRv~y~g~~~~~~~~~~~~p~~~~yv~fSqli~s~~~lg~CyQ~~DPts~~~~dl~dtDGG~I~I~ga~~I 397 (771) +-+++|..+.= .-+||.|. + |.||.-- -|---+.-|+ +-+| +.| T Consensus 230 ~m~gL~~m~nG-i~agF~Gn-----e--------v~fsEpy-~P~AWP~~yr------------~t~~---------~~I 273 (580) T protein:vir:93 230 DLTGLISLPNG-MMAAFRGK-----E--------LWLCEPW-RPHAWPQKYV------------LTMD---------YNI 273 (580) T ss_pred CcceEEeeccc-eEEEEeCC-----E--------EEEecCC-CCccchhhcC------------CCCC---------CCc Confidence 33567766533 55687766 2 7786541 1111111111 1122 479 Q ss_pred eEEEeecceeEEEecceEEEEEecccceeeecceeeeeeeeeeecCccceEEeCCeEEEEecCceEEecccccCcccccc Q lcl|Aclame:pro 398 INLVNVGSAVMVVAANGIWMIQGGSDYGFTATNYLVTKISEHGCSSPNSVVVVDNSFMYWGDDGIYHLTRNQYGDYVANN 477 (771) Q Consensus 398 v~mv~~~ssLlVft~nGVWal~G~S~~~fsAt~y~V~KISd~GcvspnSIV~id~aVvYwSDsGI~~L~~ne~g~~ss~n 477 (771) ++|-+++++|+|.|.---..+.|.+-...+...-.+ .--|+|.+|||..+++|+|.|-.|.-.+..+..--++.+. T Consensus 274 vaia~~g~~LvV~T~g~pyl~~G~~P~~ms~~kL~~----~q~CvS~rsiV~~~~~v~Yas~dGLv~i~~~ga~vvT~~l 349 (580) T protein:vir:93 274 VALGAYGTTIVVATDGQPYIVSGASPDAMSQEKLEL----NLPCINARGLVDLGYAIAYPSHDGLVVASSSGARVVTDQL 349 (580) T ss_pred eeEeeeCceEEEEEcCceEEEEccChhhcccccccc----ccccccccceeecCceEEeecCCcEEEEeCChHHHHHhhc Confidence 999999999999999888888888777665442222 2569999999999999999999999999998743333333 Q ss_pred cCchhhhhhhhhcChhHhcceeEEEEeeccEEEEEec----------------------------ccccccccccce--- Q lcl|Aclame:pro 478 LTEKTIQKYYEKIPSDAILNATGFYDSYDKKVKWLYN----------------------------TVLDGRTEPVTE--- 526 (771) Q Consensus 478 Lte~tIqt~~~sip~~~k~~~~g~yD~~~~~v~wly~----------------------------e~~d~~~~y~tE--- 526 (771) ++.. -|.++...-.++.. ++++++-+|. .+++..+.+..+ T Consensus 350 ~t~~----qW~~~~P~ti~a~~-----~eG~Y~a~Y~~~~~~~~~~~g~fi~d~~~~~~~~~~~~~~~d~~~~d~~~d~L 420 (580) T protein:vir:93 350 MTRN----DWLKTAPGRFVSGQ-----FFGRYLASYEYIDPAGTARRGSFIIDLTGQEAFLHRTNYKADATFYDITEGKL 420 (580) T ss_pred cChh----HHHhcCCceEEEEe-----ecCeEEEEEcccccccccccceEEEecCCCcceeEEeccccceeeeeccCCeE Confidence 3322 23333222222111 2233333322 222222222100 Q ss_pred ------eEEecccc----cceeeeecc-eeccceeeeeeeeeeCCceeee------------------------------ Q lcl|Aclame:pro 527 ------LVFDLALG----AFYPSKIGS-LTAGRLPIPVGSVKIPPYKLVE------------------------------ 565 (771) Q Consensus 527 ------lVf~L~~~----afY~~ki~s-~~ags~~~~i~s~~vp~y~~~~------------------------------ 565 (771) -++..+-+ -+|.||=|- +...+..+.|.-++-+.|-+.. T Consensus 421 y~~~~~~i~~~~~~~~~~~~~~WrSK~f~~~~~~sf~~~rV~s~~~~~~~~~~a~~~~~~~~~a~n~~~~~~~~~~~~~~ 500 (580) T protein:vir:93 421 YLCIGQDIYEWDALDSENEILVWRSKQYVVQKPTNFGVILIEGSVLMTPEEEAAEQAAIDAAKAHNDSIFGDASIGGELN 500 (580) T ss_pred EEEeCCEEEEEcCCCCCcceEEEecceEEecCCcCceEEEEeeccccchhhhhhhhhhhhhhhhhhhhcccccccccccc Confidence 01111111 123333322 2333333444444333321000 Q ss_pred --cceEEeeccccee-------------ecccee----eeeeeeeee-eeeeeEEEEEEEcCCCceEEEeeecCCchhhc Q lcl|Aclame:pro 566 --TGEEVTVASEQVT-------------ATGELV----TVKVSTRSP-VIRETKYIIVEKLSSPMRISFGGYTDEEFVDW 625 (771) Q Consensus 566 --t~~~V~v~~~~vv-------------~~~~~v----~~~~~~~~~-~~r~~~y~~~~~~g~~~~~sF~~~~~d~F~Dw 625 (771) ......+.+++.+ +.+.+. ...++.+-+ .++-.+.- .+++++.++.=+.--+ +...- T Consensus 501 ~~~v~~~~i~gd~~~~~~~~~~~~~~~~adG~~~~t~~~~~~~~RLPag~~a~~We--v~vsg~~~V~~v~la~-s~~EL 577 (580) T protein:vir:93 501 GAALNVYPIDGDALVRIESSRFVAATVYADGKAVATVSKLNRMCRLPSGFLAQTWE--VEVSANADIAQVTLAG-TGAEL 577 (580) T ss_pred cccceeeeeccccccccccccceEEEEeeCCeEEEEEecCCceEEccCCccccEEE--EEEEeccceeEEEEec-ChHHH Confidence 0000111111111 011111 112333433 23333322 2234555544222211 11222 Q ss_pred cccCCccc Q lcl|Aclame:pro 626 KSVDGIGV 633 (771) Q Consensus 626 ~~~~~~gv 633 (771) +- | T Consensus 578 ~~-----~ 580 (580) T protein:vir:93 578 AG-----V 580 (580) T ss_pred hc-----C Confidence 22 2 Done!