Query lcl|Aclame:protein:vir:96439|NCBI_annot:hypothetical protein|genbank:acc:YP_001218823;genbank:gi:147917340;genbank:GeneID:5142642 Match_columns 1031 No_of_seqs 3 out of 6 Neff 1.3 Searched_HMMs 1612 Date Sun Dec 1 15:53:51 2013 Command /home/guerois/workspace/virfam/python/lib/hhsearch//hhsearch2 -i .//seq/seq_38 -d /home/guerois/workspace/virfam/python/profile_database/capsid_neck_tail.hhm -glob -cpu 7 -o .//seq/HHR/seq_38_vs_rec_db.hhr No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM 1 protein:vir:96439 Length: 1031 100.0 0E+00 0E+00 4536.8 85.1 1031 1-1031 1-1031(1031) 2 protein:vir:103364 Length: 103 100.0 0E+00 0E+00 4508.8 84.3 1031 1-1031 1-1031(1031) 3 protein:vir:8837 Length: 513 # 98.7 1.7E-08 1.1E-11 63.1 20.7 440 1-512 1-513 (513) 4 protein:vir:7447 Length: 131 # 12.6 1.1 0.0007 20.3 0.6 43 984-1031 1-48 (131) 5 protein:vir:102189 Length: 135 8.1 2.3 0.0014 18.6 0.6 48 979-1031 1-56 (135) 6 protein:vir:101507 Length: 135 8.1 2.3 0.0014 18.6 0.6 48 979-1031 1-56 (135) 7 protein:vir:95261 Length: 133 1.7 38 0.024 11.9 3.6 102 247-367 1-133 (133) 8 protein:vir:99505 Length: 92 # 1.2 54 0.034 11.0 1.7 48 1-49 22-92 (92) 9 protein:vir:93906 Length: 110 1.0 62 0.039 10.7 4.6 83 924-1016 1-110 (110) 10 protein:vir:2687 Length: 110 # 1.0 62 0.039 10.7 4.6 83 924-1016 1-110 (110) No 1 >protein:vir:96439 Length: 1031 # NCBI annotation: hypothetical protein # Family: family:all:11264 # MgeID: mge:1616 # MgeName: 119X # Cross-refs: genbank:acc:YP_001218823;genbank:gi:147917340;genbank:GeneID:5142642 Probab=100.00 E-value=0 Score=4536.77 Aligned_cols=1031 Identities=100% Similarity=1.627 Sum_probs=1030.9 Q ss_pred CcCCCccEEecccceEEechhhhhhhhcccccccCcCcCCCEEEEeccccCcCcccchhhhccCcccccccCCCCCchhh Q lcl|Aclame:pro 1 MADSRGMYLDTSRSMLVIDPAKMPNNLGKATAEDTTDSSFPVIAYHGWNILPTPMGYKSAFGLMPYLRADPQPDDGNPLK 80 (1031) Q Consensus 1 MAd~~~k~iD~sRS~~viDP~sfP~nm~~ttaEDSpe~~~PViAyeg~NiLPS~~GY~S~FG~n~~L~idalp~d~nplk 80 (1031) ||||||||||+|||||||||+|||||||+||||||||||||||||||||||||+|||+|+||+||||||||||||||||| T Consensus 1 MAds~~~ylD~sRs~l~iDP~k~Pnnl~~aTaEDt~dss~PViAY~~~NILPt~~GY~S~FGl~~~L~~D~~Pddgnplk 80 (1031) T protein:vir:96 1 MADSRGMYLDTSRSMLVIDPAKMPNNLGKATAEDTTDSSFPVIAYHGWNILPTPMGYKSAFGLMPYLRADPQPDDGNPLK 80 (1031) T ss_pred CcCCCcceEeeccceEEechhhhhhhhcccccccCcccccceEEeeccccccCcccchhhhccchhhccCCCCCCCchhh Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred hcccceEEEEeechhheeeeeeecCceEEEeeccccccccccccccceeeEecCCCCCchhheeeeeeeceEEEEEcCCc Q lcl|Aclame:pro 81 QLRKQDLFTYQTINFYNLGVMLTEGGFWMYSSIGNYKSGIDLDLEEWVQIFPVPTAQDTLYLWTRCVIDNTIYIYHQGDP 160 (1031) Q Consensus 81 q~R~~~Lf~yQ~~ny~NvlVaLtE~Giwi~ss~gn~ksgidldl~~WtQ~~~v~pp~d~lYlWT~~VI~nklyiYrQGd~ 160 (1031) ||||||||+||++|||||+|||||+|||||||+||||||||||||||||+|+|+||||+|||||+||||||||||||||| T Consensus 81 q~R~q~LF~~Qt~~f~Nl~V~LTE~G~~m~s~~~nyksgidldl~eWvQ~~~v~~~~D~LY~WT~~VI~ntiYiY~QGdp 160 (1031) T protein:vir:96 81 QLRKQDLFTYQTINFYNLGVMLTEGGFWMYSSIGNYKSGIDLDLEEWVQIFPVPTAQDTLYLWTRCVIDNTIYIYHQGDP 160 (1031) T ss_pred hhhhcceeeeeechhhhhhhhhhcCceeEeecccccccccccchhhhheeeccCCCcchhhhhhhhhhcceEEEEEcCCc Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred ceEEeccchhhhhhhcccccceEEeeeeeeeeeeeeccchhcccceeeEEeeCCeeeeeeccccceehhhhhcccCCcch Q lcl|Aclame:pro 161 EIYVLADYGKIQQWKAKPNTTLVVESVDWQFGIVKFIPTFLNMEGQVGVFKADNRLGMWDTDNAIAWSSAVDKQDFKPDA 240 (1031) Q Consensus 161 ~~Y~l~~yg~~qq~ka~~~t~l~V~SVdw~~~i~~~VPtFLNM~GQvGIFrA~gRLGfWDS~NAiaWSsl~D~sDFtP~a 240 (1031) |||+|+|||+|||||||||||||||||||||||+|||||||||+||||||||+||||||||+||++||||+||||||||| T Consensus 161 eiyvladY~k~Qq~ka~~~t~lvV~SVdwqfgivkfiPTFLNMeGQVGvFkA~~RLG~WDtdNA~~WSs~~D~qDFkPd~ 240 (1031) T protein:vir:96 161 EIYVLADYGKIQQWKAKPNTTLVVESVDWQFGIVKFIPTFLNMEGQVGVFKADNRLGMWDTDNAIAWSSAVDKQDFKPDA 240 (1031) T ss_pred ceeeeecccceeeeecccccceEEEeecccccchhhcchhhccccceeEEeeCCeeeeeeccccceeccchhhhccCcch Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred hhhcceeeeecCCceEEEEEEcCCcEEEEEeceEEEEecccccccccCCceEeccCCccceeeeecCCcceeeeeeeecc Q lcl|Aclame:pro 241 TTFAGVTKFASVDGQISIILQHGPGFIIYASRSISICTPITGTPEKFSGRAILNKTGVPYYFQATMGQPDTVHFSWTNSG 320 (1031) Q Consensus 241 ~TlAgv~~FA~v~GqIvtI~phG~GfiIYaTkSI~~vrp~t~a~~~w~g~~I~~~~GIaYpfQaT~g~pDt~HFs~T~sG 320 (1031) |||||||+||++|||||||||||+||||||||||+||||+++|+++||||+||||+|||||||||||||||+||+|||+| T Consensus 241 tT~A~V~kFAsvdGqI~~I~~HG~GfiIY~srSi~~~~P~~~t~~~~s~~ai~n~tGv~Y~~QaTm~qPDTvHF~~Tn~G 320 (1031) T protein:vir:96 241 TTFAGVTKFASVDGQISIILQHGPGFIIYASRSISICTPITGTPEKFSGRAILNKTGVPYYFQATMGQPDTVHFSWTNSG 320 (1031) T ss_pred HhhhhhheeeecCceEEEEeecCCcEEEEeeceEEEEecCccCcccccceEEEccCCCcceeEEeccCCceeEEEEeeee Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred eeeeccCCcceeccchHHHHhhcCceeeEEEecccEEEEEeeccccccccceeEEEEEcCCCCCCCCCCccccCchhHHH Q lcl|Aclame:pro 321 LLRITNGNPEFIEPDVSNFLMNNFQVIRPMVINGSHLFISVANNSRDSANSRYAVLVYDGKGKPGYFNPPRYEYPDQAID 400 (1031) Q Consensus 321 L~RI~N~n~E~I~pDVsd~L~~~~tpI~~~~InGryLfi~V~~nSrdsansryavlvydgkgkpgyfnppryeypdqaid 400 (1031) |+||+|+|+|+|+|||+|||||++||||+||||||||||||+|||||||||||||||||||||||||||||||||||||| T Consensus 321 L~rI~N~n~e~I~PdVsn~L~n~~q~i~~~vinG~~LFisvannsrdsansryavlvydgkgkpgyfnppryeypdqaid 400 (1031) T protein:vir:96 321 LLRITNGNPEFIEPDVSNFLMNNFQVIRPMVINGSHLFISVANNSRDSANSRYAVLVYDGKGKPGYFNPPRYEYPDQAID 400 (1031) T ss_pred eEEEecCCcceeccchHHHHhhcCceeeeEEecccEEEEEeecCCcccccceeEEEEEcCCCCCCCCCCccccCchhHHH Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred HHHHhhhccCchHHHhCCccccCCCCCCCCCccccCccceeccCeeecCCCCcceeecccCccceEecccccccccCccc Q lcl|Aclame:pro 401 WLHDFIWGQLPEYQEQLPEYETIPPDNDPPPLAEQRPLIPCYEGYTFIPPSGFETIDWNTGTGTTISVPSIPSFRFPGGV 480 (1031) Q Consensus 401 wlhdfiwgqlpeyqeqlpeyetippdndppplaeqrplipcyegytfippsgfetidwntgtgttisvpsipsfrfpggv 480 (1031) |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| T Consensus 401 wlhdfiwgqlpeyqeqlpeyetippdndppplaeqrplipcyegytfippsgfetidwntgtgttisvpsipsfrfpggv 480 (1031) T protein:vir:96 401 WLHDFIWGQLPEYQEQLPEYETIPPDNDPPPLAEQRPLIPCYEGYTFIPPSGFETIDWNTGTGTTISVPSIPSFRFPGGV 480 (1031) T ss_pred HHHHhhhccCchHHHhCCccccCCCCCcCCCccccCccceeccCeeecCCCCcceeecccCccceEecCcccccccCccc Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred hhcccchhccccccceeeeeccCcccCCCcchhhhhhhhHHHHHHHHHHhhhHHHHHHhhhHhhhcccccccccceeeec Q lcl|Aclame:pro 481 YNMIDPQIHGLNQDTALWRYEAGPIVSPPGAHFIDKAGEEFAEIWTQMVTDLNAVRDKLGDVLRDTNKSLTNSGEMDFVG 560 (1031) Q Consensus 481 ynmidpqihglnqdtalwryeagpivsppgahfidkageefaeiwtqmvtdlnavrdklgdvlrdtnksltnsgemdfvg 560 (1031) |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| T Consensus 481 ynmidpqihglnqdtalwryeagpivsppgahfidkageefaeiwtqmvtdlnavrdklgdvlrdtnksltnsgemdfvg 560 (1031) T protein:vir:96 481 YNMIDPQIHGLNQDTALWRYEAGPIVSPPGAHFIDKAGEEFAEIWTQMVTDLNAVRDKLGDVLRDTNKSLTNSGEMDFVG 560 (1031) T ss_pred hhcccchhccccccceeeeeccCcccCCCcchhhhhhhhHHHHHHHHHHhhhHHHHHHhhhHhhhcccccccccceeeec Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred CchhcccCCCCCCCcccccccCCCeEeccchhhhheeeeEEEEEEeccCCcceEEEeeeeccchhcccceeccccccCCC Q lcl|Aclame:pro 561 DRETCRAKPVPDIPPVLPLEEDPNTIWIPEAKRTISNLLIDIKMEIESNGCDVKVIATIADYTVETGWRVIDEGWQDCNI 640 (1031) Q Consensus 561 dretcrakpvpdippvlpleedpntiwipeakrtisnllidikmeiesngcdvkviatiadytvetgwrvidegwqdcni 640 (1031) |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| T Consensus 561 dretcrakpvpdippvlpleedpntiwipeakrtisnllidikmeiesngcdvkviatiadytvetgwrvidegwqdcni 640 (1031) T protein:vir:96 561 DRETCRAKPVPDIPPVLPLEEDPNTIWIPEAKRTISNLLIDIKMEIESNGCDVKVIATIADYTVETGWRVIDEGWQDCNI 640 (1031) T ss_pred CchhcccCCCCCCCcccccccCCCeEeccchhhhheeeeEEEEEEeccCCcceEEEeeeeccchhcccceeccccccCCC Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred CCccccceeeeecCCCCccchhccchhhhHhhccCCeeEEEEEEEeeccccccccCccceeeccccccccCCCCCcceEE Q lcl|Aclame:pro 641 DDPDNYKWGYVSAPGVPPDTAAIGKRENLVKKVEGSEVEVTVFQCKCSGFGYFPAGGFSFRKTHSRSIFKPCSPTPQVTV 720 (1031) Q Consensus 641 ddpdnykwgyvsapgvppdtaaigkrenlvkkvegsevevtvfqckcsgfgyfpaggfsfrkthsrsifkpcsptpqvtv 720 (1031) |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| T Consensus 641 ddpdnykwgyvsapgvppdtaaigkrenlvkkvegsevevtvfqckcsgfgyfpaggfsfrkthsrsifkpcsptpqvtv 720 (1031) T protein:vir:96 641 DDPDNYKWGYVSAPGVPPDTAAIGKRENLVKKVEGSEVEVTVFQCKCSGFGYFPAGGFSFRKTHSRSIFKPCSPTPQVTV 720 (1031) T ss_pred CCccccceeeeecCCCCccchhccchhhhHhhccCCeeEEEEEEEeeccccccccCccceeeccccccccCCCCCcceEE Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred EEcCCccCCCCCCccceeeCCcccCCCccCCcccCCCCcccceecCCCccCCCcccccchhhhccccccceeecccceEE Q lcl|Aclame:pro 721 ITMPPNTVPDFPPEKDLIYPPYESSGGGFGYPNQFPGNGKGWIREPGSSDFGFPDTFPTWANIGKGFQVPYYPVYDKAYV 800 (1031) Q Consensus 721 itmppntvpdfppekdliyppyessgggfgypnqfpgngkgwirepgssdfgfpdtfptwanigkgfqvpyypvydkayv 800 (1031) |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| T Consensus 721 itmppntvpdfppekdliyppyessgggfgypnqfpgngkgwirepgssdfgfpdtfptwanigkgfqvpyypvydkayv 800 (1031) T protein:vir:96 721 ITMPPNTVPDFPPEKDLIYPPYESSGGGFGYPNQFPGNGKGWIREPGSSDFGFPDTFPTWANIGKGFQVPYYPVYDKAYV 800 (1031) T ss_pred EEcCCccCCCCCcccceecCCcccCCCccCCcccCCCCcccceecCCCCcCCCcccccchhhhccccccceeecccceEE Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred EEEeecccccccCCcEEEEeccCcchhhhhhccCccccceeeeehhhccCcceecccceeCCcccchhhhhhhcCcceee Q lcl|Aclame:pro 801 LDLRLGKYGVYSDPHVLIWEALPSNRAQKIEQGNTQAGDYQYRVLSEIGAGAVCGIPLEWDGEQTGYRDLARFNNLPILL 880 (1031) Q Consensus 801 ldlrlgkygvysdphvliwealpsnraqkieqgntqagdyqyrvlseigagavcgiplewdgeqtgyrdlarfnnlpill 880 (1031) |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| T Consensus 801 ldlrlgkygvysdphvliwealpsnraqkieqgntqagdyqyrvlseigagavcgiplewdgeqtgyrdlarfnnlpill 880 (1031) T protein:vir:96 801 LDLRLGKYGVYSDPHVLIWEALPSNRAQKIEQGNTQAGDYQYRVLSEIGAGAVCGIPLEWDGEQTGYRDLARFNNLPILL 880 (1031) T ss_pred EEEeecccccccCCcEEEEeccCcchhhHhhccCccccceeeeehhhccCcceecccceeCCcccchhhhhhhcCcceee Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred eccccceeeecccccccccccceeceeeeecccceecCCCeeEEEEEecccceeecccCCCCCCCccchhHhhhcccccC Q lcl|Aclame:pro 881 ASFNALSLVRLGKIGYRRAGFTELHGISIDVGSTVFNQNDTCHVNIYGATDNIKFNPYQSPDDGPFPIGDQLWKDYSYWN 960 (1031) Q Consensus 881 asfnalslvrlgkigyrragftelhgisidvgstvfnqndtchvniygatdnikfnpyqspddgpfpigdqlwkdysywn 960 (1031) |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| T Consensus 881 asfnalslvrlgkigyrragftelhgisidvgstvfnqndtchvniygatdnikfnpyqspddgpfpigdqlwkdysywn 960 (1031) T protein:vir:96 881 ASFNALSLVRLGKIGYRRAGFTELHGISIDVGSTVFNQNDTCHVNIYGATDNIKFNPYQSPDDGPFPIGDQLWKDYSYWN 960 (1031) T ss_pred eccccceeeecccccccccccceeceeeeecccceecCCCeeEEEEEecccceeecccCCCCCCCccchhHhhhcccccC Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred cccccccceeecceeeeeeecccccccccceeecceEEEEEeecccceeeEEEeccccceeeeecCCCCCC Q lcl|Aclame:pro 961 PEDRDMGAYVHTNMFGFKLQGYPSATAEIPFLRTARWFIVELRGQFDISSIVLYGKPVGRLRFVSDPFTPT 1031 (1031) Q Consensus 961 pedrdmgayvhtnmfgfklqgypsataeipflrtarwfivelrgqfdissivlygkpvgrlrfvsdpftpt 1031 (1031) ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| T Consensus 961 pedrdmgayvhtnmfgfklqgypsataeipflrtarwfivelrgqfdissivlygkpvgrlrfvsdpftpt 1031 (1031) T protein:vir:96 961 PEDRDMGAYVHTNMFGFKLQGYPSATAEIPFLRTARWFIVELRGQFDISSIVLYGKPVGRLRFVSDPFTPT 1031 (1031) T ss_pred cccccccceeecceeeeeeecccccccccceeecceEEEEEeecccceeeEEEeccccceeeeecCCCCCC Confidence 99999999999999999999999999999999999999999999999999999999999999999999999 No 2 >protein:vir:103364 Length: 1031 # NCBI annotation: hypothetical protein # Family: family:all:11264 # MgeID: mge:1621 # MgeName: PaP2 # Cross-refs: genbank:acc:YP_024749;genbank:gi:48697091;genbank:GeneID:2846032 Probab=100.00 E-value=0 Score=4508.81 Aligned_cols=1031 Identities=99% Similarity=1.622 Sum_probs=1030.9 Q ss_pred CcCCCccEEecccceEEechhhhhhhhcccccccCcCcCCCEEEEeccccCcCcccchhhhccCcccccccCCCCCchhh Q lcl|Aclame:pro 1 MADSRGMYLDTSRSMLVIDPAKMPNNLGKATAEDTTDSSFPVIAYHGWNILPTPMGYKSAFGLMPYLRADPQPDDGNPLK 80 (1031) Q Consensus 1 MAd~~~k~iD~sRS~~viDP~sfP~nm~~ttaEDSpe~~~PViAyeg~NiLPS~~GY~S~FG~n~~L~idalp~d~nplk 80 (1031) ||||||||||+|||||||||+|||||||+||||||||||||||||||||||||+|||+|+||+||||||||||||||||| T Consensus 1 MAds~~~ylD~sRs~l~iDP~k~Pnnl~~aTaEDt~dss~PViAY~~~NILPt~~GY~S~FGl~~~L~~D~~Pddgnplk 80 (1031) T protein:vir:10 1 MADSRGMYLDTSRSMLVIDPAKMPNNLGKATAEDTTDSSFPVIAYHGWNILPTPMGYKSAFGLMPYLRADPQPDDGNPLK 80 (1031) T ss_pred CcCCCcceEeeccceEEechhhhhhhhcccccccCcccccceEEeeccccccCcccchhhhccchhhccccCCCCCchhh Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred hcccceEEEEeechhheeeeeeecCceEEEeeccccccccccccccceeeEecCCCCCchhheeeeeeeceEEEEEcCCc Q lcl|Aclame:pro 81 QLRKQDLFTYQTINFYNLGVMLTEGGFWMYSSIGNYKSGIDLDLEEWVQIFPVPTAQDTLYLWTRCVIDNTIYIYHQGDP 160 (1031) Q Consensus 81 q~R~~~Lf~yQ~~ny~NvlVaLtE~Giwi~ss~gn~ksgidldl~~WtQ~~~v~pp~d~lYlWT~~VI~nklyiYrQGd~ 160 (1031) ||||||||+||++||+||+|||||+|||||||+||||||||||||||||+|+|+||||+|||||+||||||||||||||| T Consensus 81 q~R~q~LF~~Qt~~f~Nl~V~LTE~G~~m~s~~~nyksgidldl~eWvQ~~~v~~~~D~LY~WT~~VI~ntiYiY~QGdp 160 (1031) T protein:vir:10 81 QLRKQDLFTYQTINFYNLGVMLTEGGFWMYSSIGNYKSGIDLDLEEWVQIFPVPTAQDTLYLWTRCVIDNTIYIYHQGDP 160 (1031) T ss_pred hhhhcceeeEeehhhhhhhhhhhcCceeEeecccccccccccchhhhheeeccCCCcchhHHhhhhhhcceeEEEEcCCc Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred ceEEeccchhhhhhhcccccceEEeeeeeeeeeeeeccchhcccceeeEEeeCCeeeeeeccccceehhhhhcccCCcch Q lcl|Aclame:pro 161 EIYVLADYGKIQQWKAKPNTTLVVESVDWQFGIVKFIPTFLNMEGQVGVFKADNRLGMWDTDNAIAWSSAVDKQDFKPDA 240 (1031) Q Consensus 161 ~~Y~l~~yg~~qq~ka~~~t~l~V~SVdw~~~i~~~VPtFLNM~GQvGIFrA~gRLGfWDS~NAiaWSsl~D~sDFtP~a 240 (1031) |||+|+|||+|||||||||||||||||||||||+|||||||||+||||||||+||||||||+||++||||+||||||||| T Consensus 161 eiyvladY~k~Qq~ka~~~t~lvV~SVdwqfgivkfiPTFLNMeGQVGlFkA~~RLG~WDtdNA~~WSs~~D~qDFkPd~ 240 (1031) T protein:vir:10 161 EIYVLADYGKIQQWKAKPNTTLVVESVDWQFGIVKFIPTFLNMEGQVGLFKADNRLGMWDTDNAIAWSSAVDKQDFKPDA 240 (1031) T ss_pred ceeeeccccceeeeecccccceEEEeecccccchhhcchhhccccceeEEeeCCeeeeeecCccceeccchhhhccCcch Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred hhhcceeeeecCCceEEEEEEcCCcEEEEEeceEEEEecccccccccCCceEeccCCccceeeeecCCcceeeeeeeecc Q lcl|Aclame:pro 241 TTFAGVTKFASVDGQISIILQHGPGFIIYASRSISICTPITGTPEKFSGRAILNKTGVPYYFQATMGQPDTVHFSWTNSG 320 (1031) Q Consensus 241 ~TlAgv~~FA~v~GqIvtI~phG~GfiIYaTkSI~~vrp~t~a~~~w~g~~I~~~~GIaYpfQaT~g~pDt~HFs~T~sG 320 (1031) |||||||+||++|||||+|||||+||||||||||+||||+++|+++||||+||||+|||||||||||||||+||+|||+| T Consensus 241 tT~A~V~kFAsvdGqI~~I~~HG~GfiIY~srSi~~~~P~~~t~~~~s~~ai~n~tGv~Y~~QaTm~qPDTvHF~~Tn~G 320 (1031) T protein:vir:10 241 TTFAGVTKFASVDGQISMILQHGPGFIIYASRSISICTPITGTPEKFSGRAILNKTGVPYYFQATMGQPDTVHFSWTNSG 320 (1031) T ss_pred HhhhhhheeeecCceEEEEeecCCcEEEEeeceEEEEecCCcCcccccceEEEccCCCcceeEEeccCCceeEEEEeeee Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred eeeeccCCcceeccchHHHHhhcCceeeEEEecccEEEEEeeccccccccceeEEEEEcCCCCCCCCCCccccCchhHHH Q lcl|Aclame:pro 321 LLRITNGNPEFIEPDVSNFLMNNFQVIRPMVINGSHLFISVANNSRDSANSRYAVLVYDGKGKPGYFNPPRYEYPDQAID 400 (1031) Q Consensus 321 L~RI~N~n~E~I~pDVsd~L~~~~tpI~~~~InGryLfi~V~~nSrdsansryavlvydgkgkpgyfnppryeypdqaid 400 (1031) |+||+|+|+|+|+|||+|||||++||||+||||||||||||+|||||||||||||||||||||||||||||||||||||| T Consensus 321 L~rI~N~n~e~I~PdVsn~L~n~~q~i~~~vinG~~LFisvannsrdsansryavlvydgkgkpgyfnppryeypdqaid 400 (1031) T protein:vir:10 321 LLRITNGNPEFIEPDVSNFLMNNFQVIRPMVINGSHLFISVANNSRDSANSRYAVLVYDGKGKPGYFNPPRYEYPDQAID 400 (1031) T ss_pred eEEEecCCcceeccchHHHHhhcCceeeEEEecccEEEEEeecCCcccccceeEEEEEcCCCCCCCCCCccccCchhHHH Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred HHHHhhhccCchHHHhCCccccCCCCCCCCCccccCccceeccCeeecCCCCcceeecccCccceEecccccccccCccc Q lcl|Aclame:pro 401 WLHDFIWGQLPEYQEQLPEYETIPPDNDPPPLAEQRPLIPCYEGYTFIPPSGFETIDWNTGTGTTISVPSIPSFRFPGGV 480 (1031) Q Consensus 401 wlhdfiwgqlpeyqeqlpeyetippdndppplaeqrplipcyegytfippsgfetidwntgtgttisvpsipsfrfpggv 480 (1031) |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| T Consensus 401 wlhdfiwgqlpeyqeqlpeyetippdndppplaeqrplipcyegytfippsgfetidwntgtgttisvpsipsfrfpggv 480 (1031) T protein:vir:10 401 WLHDFIWGQLPEYQEQLPEYETIPPDNDPPPLAEQRPLIPCYEGYTFIPPSGFETIDWNTGTGTTISVPSIPSFRFPGGV 480 (1031) T ss_pred HHHHhhhccCchHHHhCCccccCCCCCCCCCccccCccceeccCeeecCCCCcceeecccCccceeecccccccccCccc Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred hhcccchhccccccceeeeeccCcccCCCcchhhhhhhhHHHHHHHHHHhhhHHHHHHhhhHhhhcccccccccceeeec Q lcl|Aclame:pro 481 YNMIDPQIHGLNQDTALWRYEAGPIVSPPGAHFIDKAGEEFAEIWTQMVTDLNAVRDKLGDVLRDTNKSLTNSGEMDFVG 560 (1031) Q Consensus 481 ynmidpqihglnqdtalwryeagpivsppgahfidkageefaeiwtqmvtdlnavrdklgdvlrdtnksltnsgemdfvg 560 (1031) |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| T Consensus 481 ynmidpqihglnqdtalwryeagpivsppgahfidkageefaeiwtqmvtdlnavrdklgdvlrdtnksltnsgemdfvg 560 (1031) T protein:vir:10 481 YNMIDPQIHGLNQDTALWRYEAGPIVSPPGAHFIDKAGEEFAEIWTQMVTDLNAVRDKLGDVLRDTNKSLTNSGEMDFVG 560 (1031) T ss_pred hhcccchhccccccceeeeeccCcccCCCcchhhhhhhhHHHHHHHHHHhhhHHHHHHhhhHhhhcccccccccceeeec Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred CchhcccCCCCCCCcccccccCCCeEeccchhhhheeeeEEEEEEeccCCcceEEEeeeeccchhcccceeccccccCCC Q lcl|Aclame:pro 561 DRETCRAKPVPDIPPVLPLEEDPNTIWIPEAKRTISNLLIDIKMEIESNGCDVKVIATIADYTVETGWRVIDEGWQDCNI 640 (1031) Q Consensus 561 dretcrakpvpdippvlpleedpntiwipeakrtisnllidikmeiesngcdvkviatiadytvetgwrvidegwqdcni 640 (1031) ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||+||||||||||||||||||||| T Consensus 561 dretcrakpvpdippvlpleedpntiwipeakrtisnllidikmeiesngcdvkviatvadytvetgwrvidegwqdcni 640 (1031) T protein:vir:10 561 DRETCRAKPVPDIPPVLPLEEDPNTIWIPEAKRTISNLLIDIKMEIESNGCDVKVIATVADYTVETGWRVIDEGWQDCNI 640 (1031) T ss_pred CchhcccCCCCCCCcccccccCCCeEeccchhhhheeeeEEEEEEeccCCcceEEEeeeeccchhcccceeccccccCCC Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred CCccccceeeeecCCCCccchhccchhhhHhhccCCeeEEEEEEEeeccccccccCccceeeccccccccCCCCCcceEE Q lcl|Aclame:pro 641 DDPDNYKWGYVSAPGVPPDTAAIGKRENLVKKVEGSEVEVTVFQCKCSGFGYFPAGGFSFRKTHSRSIFKPCSPTPQVTV 720 (1031) Q Consensus 641 ddpdnykwgyvsapgvppdtaaigkrenlvkkvegsevevtvfqckcsgfgyfpaggfsfrkthsrsifkpcsptpqvtv 720 (1031) |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| T Consensus 641 ddpdnykwgyvsapgvppdtaaigkrenlvkkvegsevevtvfqckcsgfgyfpaggfsfrkthsrsifkpcsptpqvtv 720 (1031) T protein:vir:10 641 DDPDNYKWGYVSAPGVPPDTAAIGKRENLVKKVEGSEVEVTVFQCKCSGFGYFPAGGFSFRKTHSRSIFKPCSPTPQVTV 720 (1031) T ss_pred CCccccceeeeecCCCCccchhccchhhhHhhccCCeeEEEEEEEeeccccccccCccccccccccccccCCCCCcceEE Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred EEcCCccCCCCCCccceeeCCcccCCCccCCcccCCCCcccceecCCCccCCCcccccchhhhccccccceeecccceEE Q lcl|Aclame:pro 721 ITMPPNTVPDFPPEKDLIYPPYESSGGGFGYPNQFPGNGKGWIREPGSSDFGFPDTFPTWANIGKGFQVPYYPVYDKAYV 800 (1031) Q Consensus 721 itmppntvpdfppekdliyppyessgggfgypnqfpgngkgwirepgssdfgfpdtfptwanigkgfqvpyypvydkayv 800 (1031) |||||||+||||.||||+|||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||| T Consensus 721 itmppntipdfpaekdllyppyensgggfgypnqfpgngkgwirepgssdfgfpdtfptwanigkgfqvpyypvydkayv 800 (1031) T protein:vir:10 721 ITMPPNTIPDFPAEKDLLYPPYENSGGGFGYPNQFPGNGKGWIREPGSSDFGFPDTFPTWANIGKGFQVPYYPVYDKAYV 800 (1031) T ss_pred EEcCCccCCCCCcccccccCCcccCCCccCCcccCCCCcccceecCCCccCCCcccccchhhhccccccceeecccceEE Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred EEEeecccccccCCcEEEEeccCcchhhhhhccCccccceeeeehhhccCcceecccceeCCcccchhhhhhhcCcceee Q lcl|Aclame:pro 801 LDLRLGKYGVYSDPHVLIWEALPSNRAQKIEQGNTQAGDYQYRVLSEIGAGAVCGIPLEWDGEQTGYRDLARFNNLPILL 880 (1031) Q Consensus 801 ldlrlgkygvysdphvliwealpsnraqkieqgntqagdyqyrvlseigagavcgiplewdgeqtgyrdlarfnnlpill 880 (1031) |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| T Consensus 801 ldlrlgkygvysdphvliwealpsnraqkieqgntqagdyqyrvlseigagavcgiplewdgeqtgyrdlarfnnlpill 880 (1031) T protein:vir:10 801 LDLRLGKYGVYSDPHVLIWEALPSNRAQKIEQGNTQAGDYQYRVLSEIGAGAVCGIPLEWDGEQTGYRDLARFNNLPILL 880 (1031) T ss_pred EEEeecccccccCCceEEEeccCcchhhhhhccCccccceeeeehhhccCcceecccceeCCcccchhhhhhhcCcceee Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred eccccceeeecccccccccccceeceeeeecccceecCCCeeEEEEEecccceeecccCCCCCCCccchhHhhhcccccC Q lcl|Aclame:pro 881 ASFNALSLVRLGKIGYRRAGFTELHGISIDVGSTVFNQNDTCHVNIYGATDNIKFNPYQSPDDGPFPIGDQLWKDYSYWN 960 (1031) Q Consensus 881 asfnalslvrlgkigyrragftelhgisidvgstvfnqndtchvniygatdnikfnpyqspddgpfpigdqlwkdysywn 960 (1031) |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| T Consensus 881 asfnalslvrlgkigyrragftelhgisidvgstvfnqndtchvniygatdnikfnpyqspddgpfpigdqlwkdysywn 960 (1031) T protein:vir:10 881 ASFNALSLVRLGKIGYRRAGFTELHGISIDVGSTVFNQNDTCHVNIYGATDNIKFNPYQSPDDGPFPIGDQLWKDYSYWN 960 (1031) T ss_pred eccccceeeecccccccccccceeceeeeecccceecCCCeeEEEEeecccceeecccCCCCCCCccchhHhhhcccccC Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred cccccccceeecceeeeeeecccccccccceeecceEEEEEeecccceeeEEEeccccceeeeecCCCCCC Q lcl|Aclame:pro 961 PEDRDMGAYVHTNMFGFKLQGYPSATAEIPFLRTARWFIVELRGQFDISSIVLYGKPVGRLRFVSDPFTPT 1031 (1031) Q Consensus 961 pedrdmgayvhtnmfgfklqgypsataeipflrtarwfivelrgqfdissivlygkpvgrlrfvsdpftpt 1031 (1031) ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| T Consensus 961 pedrdmgayvhtnmfgfklqgypsataeipflrtarwfivelrgqfdissivlygkpvgrlrfvsdpftpt 1031 (1031) T protein:vir:10 961 PEDRDMGAYVHTNMFGFKLQGYPSATAEIPFLRTARWFIVELRGQFDISSIVLYGKPVGRLRFVSDPFTPT 1031 (1031) T ss_pred cccccccceeecceeeeeeecccccccccceeecceEEEEEeecccceeeEEEeccccceeeeecCCCCCC Confidence 99999999999999999999999999999999999999999999999999999999999999999999999 No 3 >protein:vir:8837 Length: 513 # NCBI annotation: constituent protein # Family: family:all:4957 # MgeID: mge:158 # MgeName: PaP3 # Cross-refs: genbank:acc:NP_775245;genbank:gi:27476043;genbank:GeneID:2700591 Probab=98.72 E-value=1.7e-08 Score=63.12 Aligned_cols=440 Identities=17% Similarity=0.204 Sum_probs=228.1 Q ss_pred CcCCCccEEecccceEEechhhhhhhhcccccccCcCcCCCEEEEeccccCcCcccchhhhccCcccccccCCCCCchhh Q lcl|Aclame:pro 1 MADSRGMYLDTSRSMLVIDPAKMPNNLGKATAEDTTDSSFPVIAYHGWNILPTPMGYKSAFGLMPYLRADPQPDDGNPLK 80 (1031) Q Consensus 1 MAd~~~k~iD~sRS~~viDP~sfP~nm~~ttaEDSpe~~~PViAyeg~NiLPS~~GY~S~FG~n~~L~idalp~d~nplk 80 (1031) ||.+|-+++|.+-.+-=+.|..+|.+-- =.+-|.+|..-+|..+=|..|- .++++..|- T Consensus 1 ~~~~~~~~~~~~g~~~d~~p~~lp~~a~----------------s~~~N~~~~~~~~~~~~g~~pv--~a~~~~~~~--- 59 (513) T protein:vir:88 1 MALERQEVKNPTGIVTDIAPADLPLDKW----------------SFGNNVRFKNGKAQKALGHSPI--FDTAQAPIL--- 59 (513) T ss_pred CCcCChhhcccccceeccChhhcCCCcc----------------eeeeeeeEecceeeecCcccee--eecCCCCce--- Confidence 9999999999988888888888876310 1246777777777777677666 356775554 Q ss_pred hcccceEEEEeechhheeeeeeecCceEEEeeccccccccccccccceeeEecCCCCCch--hheeeeeeeceEEEEEcC Q lcl|Aclame:pro 81 QLRKQDLFTYQTINFYNLGVMLTEGGFWMYSSIGNYKSGIDLDLEEWVQIFPVPTAQDTL--YLWTRCVIDNTIYIYHQG 158 (1031) Q Consensus 81 q~R~~~Lf~yQ~~ny~NvlVaLtE~Giwi~ss~gn~ksgidldl~~WtQ~~~v~pp~d~l--YlWT~~VI~nklyiYrQG 158 (1031) -+|.|=...--.++++=+ ..++.-- ++ -|+++-. .|..+. ..|+.++..|.++. =+| T Consensus 60 -----g~~~~~~~g~~~~~~~~~--~~~~~~~-~~----------t~~dvs~--~~~~~~~~~~w~~~~f~~~i~a-~ng 118 (513) T protein:vir:88 60 -----DMFPFIRNNIPYWLLCSE--KRLYLAD-GT----------TIIDVSP--GPYSASVTNRWSVGSFNGVIFA-NDG 118 (513) T ss_pred -----eeeeeecCCCeEEEEeec--eEEEEec-Cc----------eeeeccc--cceeecccCceeeeeecCEEEE-EcC Confidence 344442222222222222 2322211 11 1555433 222332 46999999999888 667 Q ss_pred CcceEEeccchhhhhhhcccccceEEeeeeeeeeeeeeccchhcccceeeEEeeCCeeeeeeccccceehhhhhc----c Q lcl|Aclame:pro 159 DPEIYVLADYGKIQQWKAKPNTTLVVESVDWQFGIVKFIPTFLNMEGQVGVFKADNRLGMWDTDNAIAWSSAVDK----Q 234 (1031) Q Consensus 159 d~~~Y~l~~yg~~qq~ka~~~t~l~V~SVdw~~~i~~~VPtFLNM~GQvGIFrA~gRLGfWDS~NAiaWSsl~D~----s 234 (1031) +-.+.+++..+. ..+.-++.. + -|+...++++=.||=..+.. .+ -=|..|-|-||.+-|- + T Consensus 119 ~~~~q~~~~~s~--~f~dl~g~p----~-~~~a~~i~v~~~flv~~~~t---~~-----~~~~PnrV~wS~~~D~~~~P~ 183 (513) T protein:vir:88 119 VNPPHHLPPTES--VFRVLPNFP----A-NTTFRRLKSFKNFLIGLNVT---SN-----SIEMPQMVWWSTSADAGGVPA 183 (513) T ss_pred CCcceEEcCCCc--eeeeccCCC----c-ccceEEEEEEeeEEEEeecc---cC-----cCCCCceEEEecccCCccccc Confidence 766666665432 111111110 1 23455555544443221110 00 0134688999999986 7 Q ss_pred cCCcchh-hhcceeeeecCCceEEEEEEcCCcEEEEEeceEEEEecccccccccCCceEeccCCccceeeeecCCcceee Q lcl|Aclame:pro 235 DFKPDAT-TFAGVTKFASVDGQISIILQHGPGFIIYASRSISICTPITGTPEKFSGRAILNKTGVPYYFQATMGQPDTVH 313 (1031) Q Consensus 235 DFtP~a~-TlAgv~~FA~v~GqIvtI~phG~GfiIYaTkSI~~vrp~t~a~~~w~g~~I~~~~GIaYpfQaT~g~pDt~H 313 (1031) .++++.. --|+--.|++.+|.||.+++-|+=++||+.++|...++. +.+.-|+=+-|.++.|...|.= +-+-+..| T Consensus 184 ~W~~t~~t~~a~~~~l~d~~g~~v~g~~~g~~liif~e~~i~~m~y~-g~~~if~~~~i~~~~G~~~p~S--I~~~~~~~ 260 (513) T protein:vir:88 184 SWDPTDPTKDAGQNTLADTNGAIVDGVKLRDSFIIYKEDSVYSMRYI-GGLYIFQFQQLFNDVGILGPNC--AIEFDGNH 260 (513) T ss_pred ccccccccCcccccccCCCccceeeeeecccceEEEecccEEEEEec-CCCceEEEEeecccccccCCce--eEEECCeE Confidence 7765543 346777888899999999999999999999999999997 6777899999999999998864 44567889 Q ss_pred eeeeecceeeeccCCcceecc-chHHHHhhcCceeeEEEecccEEEE----Eeeccccccccc--eeEEEEEcCCCCC-- Q lcl|Aclame:pro 314 FSWTNSGLLRITNGNPEFIEP-DVSNFLMNNFQVIRPMVINGSHLFI----SVANNSRDSANS--RYAVLVYDGKGKP-- 384 (1031) Q Consensus 314 Fs~T~sGL~RI~N~n~E~I~p-DVsd~L~~~~tpI~~~~InGryLfi----~V~~nSrdsans--ryavlvydgkgkp-- 384 (1031) |..+..|+++|.-..++-|-- .|-++|-++...-++.+|-+.+.=. -++-.|-+++++ ...+||||=+-+- T Consensus 261 ffls~~Gf~~~~G~~~~~Ig~ekVdk~f~~~~n~~~~~~~~~~~d~~~~~v~~~y~s~~~~~~~~~~~~lVYd~~~~~Ws 340 (513) T protein:vir:88 261 FVVGHGDVYVHNGVQKQSVIDAQVRKFFFSDINPDNYQRTFVLADHVNTEMWVCYSSTRSEPGKHCDRAIIWNWKENTWS 340 (513) T ss_pred EEEeCCceEEecCceeeecccchhhhhhhccCCcccceEEEEEEcCcccEEEEEecCCCCCCCcccceEEEEEccCCeEE Confidence 999999999998777777744 4888888887777776665443211 133344444433 3467888865432 Q ss_pred ---------CCCCCcccc----CchhHHHH-HHHhhhcc-------C----chHHHh------------CCccccC---- Q lcl|Aclame:pro 385 ---------GYFNPPRYE----YPDQAIDW-LHDFIWGQ-------L----PEYQEQ------------LPEYETI---- 423 (1031) Q Consensus 385 ---------gyfnpprye----ypdqaidw-lhdfiwgq-------l----peyqeq------------lpeyeti---- 423 (1031) |+|.-+--+ +.++.+-| .+++-|.+ . +-+++- =+++|.. T Consensus 341 ~~~~p~~~~g~~g~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~sl~~~~~~~~~~~~fd~~~~f~G~~lea~~~t~ 420 (513) T protein:vir:88 341 IRDLPNVLSGAYGIIDPKTSNLWDDDSNPWDTDTSVWGEGSYNPAKSSMIFTSFQDAKLFLFGETSTFSGQSFTSTLERS 420 (513) T ss_pred EEeccchhhcccccccccccceecccccccccchhhhhccccccccceeEeeeccCCceeeecccccccCCceEEEEEec Confidence 222111000 11111111 11122211 0 111110 0111110 Q ss_pred CCC-CCCCCccccCccceeccCeeecCCCCcceeecccCccceEeccccc-----ccccCccchhcccchhcc------- Q lcl|Aclame:pro 424 PPD-NDPPPLAEQRPLIPCYEGYTFIPPSGFETIDWNTGTGTTISVPSIP-----SFRFPGGVYNMIDPQIHG------- 490 (1031) Q Consensus 424 ppd-ndppplaeqrplipcyegytfippsgfetidwntgtgttisvpsip-----sfrfpggvynmidpqihg------- 490 (1031) +-+ .++.-++.-+.++|-.. .+|--++. -|+. .+|.-+ +.+++-++-.+|+=..-| T Consensus 421 ~~~~~~~~~~~~i~~v~~~~t------~~g~~t~~--vg~~---~~~~~~~~~s~~~~~~~~~~~~~~~r~~gRy~~~ri 489 (513) T protein:vir:88 421 DIYLGDDRMMKTVSAVIPHIT------GNGVCNIW--VGNA---QVQGSGIRWKGPYPYRIGQDYKIDTKHVGRYIALKF 489 (513) T ss_pred CccccCchhheeeeeeeeeee------cceEEEEE--Eeee---ccCccccccccceeeecccCceEEeccCCceEEEEE Confidence 000 11111222222222110 01100000 0110 111111 112221111111110000 Q ss_pred ccccceeeeeccCc---ccCCCcch Q lcl|Aclame:pro 491 LNQDTALWRYEAGP---IVSPPGAH 512 (1031) Q Consensus 491 lnqdtalwryeagp---ivsppgah 512 (1031) -+-+.+-|++ .|= ++...|.. T Consensus 490 ~i~~~~~w~~-~G~~ve~~~~~g~R 513 (513) T protein:vir:88 490 DFASAGDWYF-NGYTLEMAPKAGMR 513 (513) T ss_pred EccCCCceEE-eeEEEEEecCCCCC Confidence 0112233443 221 11123444 No 4 >protein:vir:7447 Length: 131 # NCBI annotation: gp24 # Family: family:all:6925 # MgeID: mge:147 # MgeName: Barnyard # Cross-refs: genbank:acc:NP_818562;genbank:gi:29566999;genbank:GeneID:1260239 Probab=12.62 E-value=1.1 Score=20.29 Aligned_cols=43 Identities=33% Similarity=0.394 Sum_probs=30.9 Q ss_pred ccccccceeec-ceEEEEEeecccceeeEEEec----cccceeeeecCCCCCC Q lcl|Aclame:pro 984 SATAEIPFLRT-ARWFIVELRGQFDISSIVLYG----KPVGRLRFVSDPFTPT 1031 (1031) Q Consensus 984 sataeipflrt-arwfivelrgqfdissivlyg----kpvgrlrfvsdpftpt 1031 (1031) -..||+-|+|. -||||- -|-+|||||- +|-|.-+|..-|-.|. T Consensus 1 ~~~~el~~~Rk~T~~FI~-----~Dpt~ivL~~~~~~rpgG~~~~~~gppR~p 48 (131) T protein:vir:74 1 MNAAELALHRKGTRDFIN-----RDKTSLVLYPTNETWVAGTKVYNDVPPRPA 48 (131) T ss_pred CchhHhHHHhhhhhhhhc-----CCCceEEEeccccccCCCccccCCCCCCCc Confidence 45689999986 599995 4889999993 4666667765554433 No 5 >protein:vir:102189 Length: 135 # NCBI annotation: gp20 # Family: family:all:6925 # MgeID: mge:1648 # MgeName: PBI1 # Cross-refs: genbank:acc:YP_655216;genbank:gi:109522796;genbank:GeneID:4157428 Probab=8.11 E-value=2.3 Score=18.62 Aligned_cols=48 Identities=33% Similarity=0.394 Sum_probs=32.7 Q ss_pred eecccccccccceeec-ceEEEEEeecccceeeEEEe-------ccccceeeeecCCCCCC Q lcl|Aclame:pro 979 LQGYPSATAEIPFLRT-ARWFIVELRGQFDISSIVLY-------GKPVGRLRFVSDPFTPT 1031 (1031) Q Consensus 979 lqgypsataeipflrt-arwfivelrgqfdissivly-------gkpvgrlrfvsdpftpt 1031 (1031) +.--.||...+-|+|. -||||- -|-+||+|+ -||-|--||..-|-.|. T Consensus 1 ~~~~~~~~~~l~~~Rk~T~~FI~-----~Dpt~ivL~p~~~t~~ekPgG~~~~~~gppR~p 56 (135) T protein:vir:10 1 MTVSASAQRGLEFLRAGTRAFID-----DDPTTIVLNRGQATRVEKPGGGYDFTPGAPRTA 56 (135) T ss_pred CccccchhhhHHHHhhhhhhhhc-----CCCceEEEECCcceEEecCCCCcccCCCCCCCc Confidence 1122345556777775 589995 488999999 47888888876655444 No 6 >protein:vir:101507 Length: 135 # NCBI annotation: gp20 # Family: family:all:6925 # MgeID: mge:1627 # MgeName: PLot # Cross-refs: genbank:acc:YP_655399;genbank:gi:109522587;genbank:GeneID:4157579 Probab=8.11 E-value=2.3 Score=18.62 Aligned_cols=48 Identities=33% Similarity=0.394 Sum_probs=32.7 Q ss_pred eecccccccccceeec-ceEEEEEeecccceeeEEEe-------ccccceeeeecCCCCCC Q lcl|Aclame:pro 979 LQGYPSATAEIPFLRT-ARWFIVELRGQFDISSIVLY-------GKPVGRLRFVSDPFTPT 1031 (1031) Q Consensus 979 lqgypsataeipflrt-arwfivelrgqfdissivly-------gkpvgrlrfvsdpftpt 1031 (1031) +.--.||...+-|+|. -||||- -|-+||+|+ -||-|--||..-|-.|. T Consensus 1 ~~~~~~~~~~l~~~Rk~T~~FI~-----~Dpt~ivL~p~~~t~~ekPgG~~~~~~gppR~p 56 (135) T protein:vir:10 1 MTVSASAQRGLEFLRAGTRAFID-----DDPTTIVLNRGQATRVEKPGGGYDFTPGAPRTA 56 (135) T ss_pred CccccchhhhHHHHhhhhhhhhc-----CCCceEEEECCcceEEecCCCCcccCCCCCCCc Confidence 1122345556777775 589995 488999999 47888888876655444 No 7 >protein:vir:95261 Length: 133 # NCBI annotation: Phage hypothetical protein # Family: family:all:31736 # MgeID: mge:1561 # MgeName: Felix 01 # Cross-refs: genbank:acc:NP_944894;genbank:gi:38707834;genbank:GeneID:2744047 Probab=1.74 E-value=38 Score=11.88 Aligned_cols=102 Identities=11% Similarity=0.087 Sum_probs=56.6 Q ss_pred eeeecCCceEEEEEEcCCcEEEEEeceEEEEec-ccccccccCCceEeccCCccceeeeecCC--------------cce Q lcl|Aclame:pro 247 TKFASVDGQISIILQHGPGFIIYASRSISICTP-ITGTPEKFSGRAILNKTGVPYYFQATMGQ--------------PDT 311 (1031) Q Consensus 247 ~~FA~v~GqIvtI~phG~GfiIYaTkSI~~vrp-~t~a~~~w~g~~I~~~~GIaYpfQaT~g~--------------pDt 311 (1031) |.|. --.|+..+|+ +++.-.+=.|+-+-....+.+++||++-- |+- T Consensus 1 M~~~-------------------~rhs~~~~R~~seg~Y~~~~GrWV~g~~~v~~~i~asIQP~~~ss~~~~q~~~lpeG 61 (133) T protein:vir:95 1 MRLL-------------------NRHSFVVKRKVSEDGYYNDDGDWVASQDIVEVNCKGNIQPYIKGSVKNGTQIALPEG 61 (133) T ss_pred CCcc-------------------ccceeEEEEeecCCceEccCCcccCCCCccceeeeeeecccccccccccchhcccCC Confidence 1111 1237788888 77777777788888899999999998632 333 Q ss_pred eeeee----eecceeeecc----CCcceeccchHHHHhhcCceeeEEE--ec-ccEEEEE-----eeccccc Q lcl|Aclame:pro 312 VHFSW----TNSGLLRITN----GNPEFIEPDVSNFLMNNFQVIRPMV--IN-GSHLFIS-----VANNSRD 367 (1031) Q Consensus 312 ~HFs~----T~sGL~RI~N----~n~E~I~pDVsd~L~~~~tpI~~~~--In-GryLfi~-----V~~nSrd 367 (1031) .|..- =++-.++|.. .++..++=|..+|+-.++.+-...| +. =|||++. -+.|||. T Consensus 62 rrit~avrIYTda~L~vage~~~~~gDvvl~dg~eYev~~r~~w~~Gv~~isHyrY~aVR~~~~~~~~~~~~ 133 (133) T protein:vir:95 62 IRLTDTRILYTTYKLRTSDDVEWNESDIVMIDGHEYEVFMTMDWSQQLSHTSHYEYIIIRRDKMNAVRNSRT 133 (133) T ss_pred eeeeeEEEEEeeeeeeeecccccCCCcEEEEcCCceEEEEecchhhccccCCceeEEEEeecchhhhhccCC Confidence 33321 1334455532 2234555566666666665555555 32 2455442 2233333 No 8 >protein:vir:99505 Length: 92 # NCBI annotation: putative protein # Family: family:all:32770 # MgeID: mge:1559 # MgeName: Lj928 # Cross-refs: genbank:acc:NP_958540;genbank:gi:41179322;genbank:GeneID:2717143 Probab=1.19 E-value=54 Score=11.03 Aligned_cols=48 Identities=33% Similarity=0.458 Sum_probs=24.8 Q ss_pred CcCCCccEEec---------ccceEE------------echhhhhhhhcccccccCcCcCCCE--EEEeccc Q lcl|Aclame:pro 1 MADSRGMYLDT---------SRSMLV------------IDPAKMPNNLGKATAEDTTDSSFPV--IAYHGWN 49 (1031) Q Consensus 1 MAd~~~k~iD~---------sRS~~v------------iDP~sfP~nm~~ttaEDSpe~~~PV--iAyeg~N 49 (1031) -||-..|=+|- -|.|+| |.-+|+|-|+.-|.|..+ |.---. +-|||+= T Consensus 22 panitqmgldqtinifgdakqrpyvvrlpipvdfrngyiksnslpcnlevtsartt-drittligveyhgrl 92 (92) T protein:vir:99 22 PANITQMGLDQTINIFGDAKQRPYVVRLPIPVDFRNGYIKSNSLPCNLEVTSARTT-DRITTLIGVEYHGRL 92 (92) T ss_pred ccchhhhcccceeeeeeccccCceEEeccceeccccceeecCccccceeecccccc-cceeeeeeeeecccC Confidence 12222222221 133433 346899999988877543 332222 5688875 No 9 >protein:vir:93906 Length: 110 # NCBI annotation: ORF036 # Family: family:all:267 # MgeID: mge:1485 # MgeName: 3A # Cross-refs: genbank:acc:YP_239941;genbank:gi:66395624;genbank:GeneID:5130972 Probab=1.04 E-value=62 Score=10.71 Aligned_cols=83 Identities=24% Similarity=0.306 Sum_probs=46.6 Q ss_pred EEEEecccceeecccCCCCCCCccchhHhhhccccc----Cccccc--------------------ccceeecceeeeee Q lcl|Aclame:pro 924 VNIYGATDNIKFNPYQSPDDGPFPIGDQLWKDYSYW----NPEDRD--------------------MGAYVHTNMFGFKL 979 (1031) Q Consensus 924 vniygatdnikfnpyqspddgpfpigdqlwkdysyw----npedrd--------------------mgayvhtnmfgfkl 979 (1031) |+-=--..-+.|--| +.|||+|--+.-=+-|+-| +|.-+| ++.|.-+|+.=+.+ T Consensus 1 ~~~g~L~T~V~Fy~~--~ndgpepg~~e~~~ly~c~a~iy~ps~kD~e~l~~~~sk~~~Ti~IRdp~~~y~P~n~h~veI 78 (110) T protein:vir:93 1 MEFNEFKDRAYFFQY--VNKGPYPDEEEKMKLYSCFCKIYNPSMKDREILKATESKSGLTIIMRSSKIEYLPQTNHLVKI 78 (110) T ss_pred CCCCCcCccEEEEEe--cCCCCCCCchhhheeeeeeccccCcchhhhhhhcccccccccEEEEecCCCccccCCccEEEE Confidence 111111233455444 4579998665554556655 566665 45555555555544 Q ss_pred ecccccccccceeecceEEEEEeecccce---eeEEEecc Q lcl|Aclame:pro 980 QGYPSATAEIPFLRTARWFIVELRGQFDI---SSIVLYGK 1016 (1031) Q Consensus 980 qgypsataeipflrtarwfivelrgqfdi---ssivlygk 1016 (1031) +-+. +---+|=|.+.|-.++= --|||--| T Consensus 79 ~d~r--------y~~~~~nI~~V~PD~~~~~fi~Ivlg~~ 110 (110) T protein:vir:93 79 DRGL--------YSDKLFNIKEIRIDTPDIGYNTVVLSEK 110 (110) T ss_pred eccc--------cCCceeeEEEeecCCCCCceEEEEEecC Confidence 4332 33468999999987753 35666666 No 10 >protein:vir:2687 Length: 110 # NCBI annotation: hypothetical protein # Family: family:all:267 # MgeID: mge:57 # MgeName: phiSLT # Cross-refs: genbank:acc:NP_075506;genbank:gi:12719435;genbank:GeneID:920192 Probab=1.04 E-value=62 Score=10.71 Aligned_cols=83 Identities=24% Similarity=0.306 Sum_probs=46.6 Q ss_pred EEEEecccceeecccCCCCCCCccchhHhhhccccc----Cccccc--------------------ccceeecceeeeee Q lcl|Aclame:pro 924 VNIYGATDNIKFNPYQSPDDGPFPIGDQLWKDYSYW----NPEDRD--------------------MGAYVHTNMFGFKL 979 (1031) Q Consensus 924 vniygatdnikfnpyqspddgpfpigdqlwkdysyw----npedrd--------------------mgayvhtnmfgfkl 979 (1031) |+-=--..-+.|--| +.|||+|--+.-=+-|+-| +|.-+| ++.|.-+|+.=+.+ T Consensus 1 ~~~g~L~T~V~Fy~~--~ndgpepg~~e~~~ly~c~a~iy~ps~kD~e~l~~~~sk~~~Ti~IRdp~~~y~P~n~h~veI 78 (110) T protein:vir:26 1 MEFNEFKDRAYFFQY--VNKGPYPDEEEKMKLYSCFCKIYNPSMKDREILKATESKSGLTIIMRSSKIEYLPQTNHLVKI 78 (110) T ss_pred CCCCCcCccEEEEEe--cCCCCCCCchhhheeeeeeccccCcchhhhhhhcccccccccEEEEecCCCccccCCccEEEE Confidence 111111233455444 4579998665554556655 566665 45555555555544 Q ss_pred ecccccccccceeecceEEEEEeecccce---eeEEEecc Q lcl|Aclame:pro 980 QGYPSATAEIPFLRTARWFIVELRGQFDI---SSIVLYGK 1016 (1031) Q Consensus 980 qgypsataeipflrtarwfivelrgqfdi---ssivlygk 1016 (1031) +-+. +---+|=|.+.|-.++= --|||--| T Consensus 79 ~d~r--------y~~~~~nI~~V~PD~~~~~fi~Ivlg~~ 110 (110) T protein:vir:26 79 DRGL--------YSDKLFNIKEIRIDTPDIGYNTVVLSEK 110 (110) T ss_pred eccc--------cCCceeeEEEeecCCCCCceEEEEEecC Confidence 4332 33468999999987753 35666666 Done!