Query lcl|Aclame:protein:vir:95324|NCBI_annot:hypothetical protein|genbank:acc:YP_512269;genbank:gi:89152436;genbank:GeneID:3952993 Match_columns 823 No_of_seqs 239 out of 321 Neff 8.4 Searched_HMMs 1612 Date Mon Dec 2 08:57:59 2013 Command /home/guerois/workspace/virfam/python/lib/hhsearch//hhsearch2 -i .//seq/seq_20 -d /home/guerois/workspace/virfam/python/profile_database/capsid_neck_tail.hhm -glob -cpu 7 -o .//seq/HHR/seq_20_vs_rec_db.hhr No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM 1 protein:vir:95324 Length: 823 100.0 4E-274 3E-277 1519.3 91.2 823 1-823 1-823 (823) 2 protein:vir:7329 Length: 825 # 100.0 9E-267 6E-270 1479.1 87.5 811 1-823 1-825 (825) 3 protein:vir:107802 Length: 681 100.0 2E-214 1E-217 1192.6 75.7 679 1-822 1-681 (681) 4 protein:vir:98487 Length: 681 100.0 2E-214 1E-217 1192.6 75.7 679 1-822 1-681 (681) 5 protein:vir:107423 Length: 681 100.0 2E-214 1E-217 1192.6 75.7 679 1-822 1-681 (681) 6 protein:vir:103790 Length: 768 100.0 2E-212 1E-215 1180.8 80.0 723 1-823 1-767 (768) 7 protein:vir:102644 Length: 594 100.0 2E-179 1E-182 1000.5 63.6 570 1-823 1-594 (594) 8 protein:vir:99677 Length: 794 100.0 5E-166 3E-169 927.0 75.9 713 1-823 1-790 (794) 9 protein:vir:94713 Length: 785 100.0 2E-164 1E-167 918.2 73.1 710 1-823 1-781 (785) 10 protein:vir:94583 Length: 792 100.0 9E-164 6E-167 914.4 68.9 714 1-823 1-788 (792) 11 protein:vir:2203 Length: 794 # 100.0 1E-161 8E-165 902.6 74.4 718 1-823 1-790 (794) 12 protein:vir:10452 Length: 794 100.0 3E-160 2E-163 895.4 73.1 714 1-823 1-790 (794) 13 protein:vir:1543 Length: 801 # 100.0 7E-159 4E-162 887.8 72.8 714 1-823 1-797 (801) 14 protein:vir:80253 Length: 777 100.0 5E-158 3E-161 882.7 68.4 703 1-823 1-773 (777) 15 protein:vir:8887 Length: 808 # 100.0 1E-155 7E-159 870.0 72.7 716 1-823 1-804 (808) 16 protein:vir:6326 Length: 826 # 100.0 4E-155 2E-158 867.2 73.0 704 1-823 1-822 (826) 17 protein:vir:7021 Length: 803 # 100.0 2E-155 1E-158 868.5 70.3 722 1-823 1-799 (803) 18 protein:vir:97014 Length: 800 100.0 7E-155 4E-158 865.6 70.6 720 1-823 1-796 (800) 19 protein:vir:3366 Length: 801 # 100.0 2E-154 1E-157 863.8 71.3 713 1-823 1-797 (801) 20 protein:vir:103341 Length: 806 100.0 2E-153 1E-156 857.7 72.2 717 1-823 1-802 (806) 21 protein:vir:78957 Length: 826 100.0 1E-153 7E-157 859.1 69.8 710 1-823 1-822 (826) 22 protein:vir:105647 Length: 800 100.0 4E-151 3E-154 844.9 70.8 712 1-823 1-796 (800) 23 protein:vir:78703 Length: 905 100.0 8E-138 5E-141 772.3 67.9 715 1-823 1-900 (905) 24 protein:vir:100022 Length: 976 100.0 1E-135 7E-139 760.5 66.7 730 1-823 1-971 (976) 25 protein:vir:1778 Length: 680 # 100.0 3E-103 2E-106 582.8 45.9 502 1-517 1-680 (680) 26 protein:vir:80177 Length: 1027 99.8 4.6E-20 2.9E-23 126.6 30.8 777 1-823 1-1000(1027) 27 protein:vir:94602 Length: 1012 99.7 1.5E-16 9.3E-20 107.3 34.0 755 1-823 1-999 (1012) 28 protein:vir:2625 Length: 715 # 99.7 3.1E-14 1.9E-17 94.6 42.2 613 1-695 1-715 (715) 29 protein:vir:7329 Length: 825 # 99.5 4E-12 2.5E-15 83.1 39.1 650 1-731 35-825 (825) 30 protein:vir:95475 Length: 771 99.5 9.9E-12 6.2E-15 80.9 40.3 693 1-823 1-770 (771) 31 protein:vir:3366 Length: 801 # 99.4 7.7E-12 4.8E-15 81.5 28.9 652 1-741 46-801 (801) 32 protein:vir:95324 Length: 823 99.2 3.3E-10 2.1E-13 72.5 40.0 660 1-731 65-823 (823) 33 protein:vir:1543 Length: 801 # 99.2 6E-10 3.7E-13 71.1 30.4 662 1-741 46-801 (801) 34 protein:vir:3133 Length: 911 # 98.8 4.2E-08 2.6E-11 61.0 42.1 763 1-806 1-911 (911) 35 protein:vir:100022 Length: 976 97.9 1.2E-05 7.7E-09 47.5 38.3 657 1-741 162-976 (976) 36 protein:vir:2203 Length: 794 # 97.0 0.00023 1.5E-07 40.5 33.4 620 1-741 114-794 (794) 37 protein:vir:94583 Length: 792 96.9 0.00029 1.8E-07 40.0 32.5 642 1-741 61-792 (792) 38 protein:vir:8837 Length: 513 # 96.8 0.00032 2E-07 39.8 32.9 454 185-691 1-513 (513) 39 protein:vir:107423 Length: 681 96.5 0.0006 3.7E-07 38.2 38.4 601 1-732 36-681 (681) 40 protein:vir:107802 Length: 681 96.5 0.0006 3.7E-07 38.2 38.4 601 1-732 36-681 (681) 41 protein:vir:98487 Length: 681 96.5 0.0006 3.7E-07 38.2 38.4 601 1-732 36-681 (681) 42 protein:vir:103790 Length: 768 95.2 0.0026 1.6E-06 34.7 39.7 614 1-738 101-768 (768) 43 protein:vir:97014 Length: 800 95.0 0.0029 1.8E-06 34.5 38.5 642 1-741 85-800 (800) 44 protein:vir:10452 Length: 794 93.9 0.0061 3.8E-06 32.7 32.9 620 1-741 132-794 (794) 45 protein:vir:105563 Length: 396 93.5 0.0072 4.5E-06 32.3 20.9 370 1-488 1-396 (396) 46 protein:vir:9268 Length: 472 # 82.6 0.076 4.7E-05 26.7 32.6 416 152-666 1-472 (472) 47 protein:vir:78703 Length: 905 74.7 0.16 9.7E-05 25.0 35.8 646 1-744 176-905 (905) 48 protein:vir:99677 Length: 794 71.4 0.2 0.00012 24.5 35.2 604 1-741 133-794 (794) 49 protein:vir:94713 Length: 785 60.7 0.37 0.00023 23.0 38.9 572 1-741 132-785 (785) 50 protein:vir:2109 Length: 472 # 55.7 0.47 0.00029 22.4 31.6 416 157-666 1-472 (472) 51 protein:vir:103341 Length: 806 48.1 0.68 0.00042 21.5 37.0 649 1-741 57-806 (806) 52 protein:vir:6326 Length: 826 # 36.6 1.2 0.00072 20.2 34.9 644 1-741 114-826 (826) 53 protein:vir:100960 Length: 472 35.2 1.2 0.00077 20.1 31.7 415 152-666 1-472 (472) 54 protein:vir:8887 Length: 808 # 30.7 1.6 0.00096 19.5 39.1 650 1-741 13-808 (808) No 1 >protein:vir:95324 Length: 823 # NCBI annotation: hypothetical protein # Family: family:all:780 # MgeID: mge:1564 # MgeName: phiV10 # Cross-refs: genbank:acc:YP_512269;genbank:gi:89152436;genbank:GeneID:3952993 Probab=100.00 E-value=4.3e-274 Score=1519.30 Aligned_cols=823 Identities=100% Similarity=1.498 Sum_probs=806.1 Q ss_pred CceeeeecccccccccccccccchHHHHHHHHhhhhcceeeecCCceecCcceeeeeecCCCCCceEEEEEECCCCeEEE Q lcl|Aclame:pro 1 MAISWIQPSFAGGEIGPSLYGRIDMAKYQVALRKCDNFIVRQYGGVENRPGTRFVGAAKYPNRKCRLIPFQFSTVQTYAL 80 (823) Q Consensus 1 M~~~~~q~sF~~GElsP~l~~r~Dl~ry~~q~~~~~N~~~~~~GGl~rRPGt~fva~~~~~~~~~rLipF~~~~~~~Y~l 80 (823) |||+++|+||++|||||+|++|+||+||++||++|+||+++|+|||+|||||+||++++++++++|||||+|+++|+|+| T Consensus 1 m~i~~~q~sF~~GElsP~l~gR~Dl~ry~~q~~~~~N~~~~~~GGl~rRpGt~fva~~~~~~g~~rLipf~~s~~q~y~L 80 (823) T protein:vir:95 1 MAISWIQPSFAGGEIGPSLYGRIDMAKYQVALRKCDNFIVRQYGGVENRPGTRFVGAAKYPNRKCRLIPFQFSTVQTYAL 80 (823) T ss_pred CcceeechhccCceechheeccchHHHHHHHHhhhhCcEeeecCCceecCchhhhhhhcCCCCCeeEEEEEeCCCcEEEE Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred EEeCCeEEEEECCceEeeccccceEEeccccccccceeEEEEeCcEEEEEeCCceEEEEEEcCCCCceeeeEEEeccccc Q lcl|Aclame:pro 81 EFGHQYMRVIKDGALVLNSSNVIYEIATPYTEADLFRIKFTQSADVLTLVHPAYPPKELRRYAHDNWQLVDVVTKNGPFE 160 (823) Q Consensus 81 ~fg~~~irV~~~~g~v~~t~~~~~~~~tPyt~~~l~~L~~~qsaD~~fIvn~~~~p~~l~r~~~~~ws~~~~~f~~~p~~ 160 (823) ||++++||||+++++++++++.+++++|||+++++++|+|+|+||++||+|++|||++|.|.++++|+++++.|..+|+. T Consensus 81 efg~~~irV~~~~g~vv~~~~~~~ev~tPy~~~~l~~Lr~~qsaD~~fivh~~~~p~~L~r~~~~~w~l~~~~~~~gp~~ 160 (823) T protein:vir:95 81 EFGHQYMRVIKDGALVLNSSNVIYEIATPYTEADLFRIKFTQSADVLTLVHPAYPPKELRRYAHDNWQLVDVVTKNGPFE 160 (823) T ss_pred EEcCCeEEEEeCCcEEEecCCceeEEecccccccccceeEEEeccEEEEEcCCccceEEEecCCCCceEEEEEEeccccc Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred cccccceEEEEecccCCceeeeccccccccccccceEEEcccccceecceeeeeeeeeeeeEEeccceeeeEecccceee Q lcl|Aclame:pro 161 DINIDESLTVYASASTGTITLTASASIFGAEQVGKLFYLEQPAVDSVPVWETSKSTSIGDIRRADSNYYRAVTAGKTGTL 240 (823) Q Consensus 161 ~i~~~~s~t~t~~a~t~~~Tvtas~~~~~a~~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~ 240 (823) .++.+.+.+.++.+..+.++++++.+.++++++|..+++......+...|.+...+..+.....+.+++...+.++++++ T Consensus 161 ~~~~~~t~~v~~~~~~~~~t~ta~~~~~~~d~vg~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 240 (823) T protein:vir:95 161 DINIDESLTVYASASTGTITLTASASIFGAEQVGKLFYLEQPAVDSVPVWETSKSTSIGDIRRADSNYYRAVTAGKTGTL 240 (823) T ss_pred cccccceeEEeccccCceeEEeecccccchhhccceEEEeccccceeeecceeeeecccceEEecccceeeeecccccee Confidence 99999999999999999999999999999999999999999999999999998888999999999999999999999999 Q ss_pred cccccCceEEEEeceeccccceEEEEEEecCccEEEEEEecCccccccEEEEeeccccccccCcceecccCcccCCCCcc Q lcl|Aclame:pro 241 RPSHTEGTSWDGWGGSGDDDTGIEWEYLHSGFGIARITAVNGTTATAEVISYIPSQVVGEDNASYKWAKYAWNSVNGYPG 320 (823) Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~w~~~~g~Ps 320 (823) .+.+..+.+|+.+.++..++.++.|.+++.+.|+++++++++.++......++|+.+.+...++++|++.+|++++|||+ T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~v~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~~g~Ps 320 (823) T protein:vir:95 241 RPSHTEGTSWDGWGGSGDDDTGIEWEYLHSGFGIARITAVNGTTATAEVISYIPSQVVGEDNASYKWAKYAWNSVNGYPG 320 (823) T ss_pred ecccCCcceEEeceecccccceeEEEEEeCCcceEEEEeecceeeeceEeeeeccccccCCcCCccccccccCcCCCCcc Confidence 99999999999999999999999999999999999999999999989999999999999999999999999999999999 Q ss_pred EEEEEeceEEEEeCcCCCcEEEEEcccCcccccccccCCCCCcEEEEEcCCCceEEEEEeecCcEEEEecCcEEEEecCC Q lcl|Aclame:pro 321 TVVYYQQRLYFAASTAFPQTIWASRTGDYKDFGKSNPTQDDDRIIYTYAGRQVNEIRHLIDVGSLVALTSGGEYVITGDQ 400 (823) Q Consensus 321 ~v~f~q~RL~f~~~~~~p~~V~~Sr~gdy~nF~~~t~~~DdD~I~~~~~~~~~~~i~~~v~~~~Ll~~t~~~q~~l~~~~ 400 (823) +|+||||||+|+|++++|++|||||+|||+||+++++++|||||++++++++++.|+|++++++|+|||+++||+|++++ T Consensus 321 ~v~f~q~RL~f~g~~~~p~~v~~Srtgd~~nF~~~~~~~DdD~I~~~~s~~~~~~i~~~v~~~~Lli~t~~~e~~l~~~~ 400 (823) T protein:vir:95 321 TVVYYQQRLYFAASTAFPQTIWASRTGDYKDFGKSNPTQDDDRIIYTYAGRQVNEIRHLIDVGSLVALTSGGEYVITGDQ 400 (823) T ss_pred EEEEEeceEEEEEcCCCCcEEEEeccCCccccccccCCCCCCcEEEEEcCCcceEEEEEeecCcEEEEecCcEEEEEcCC Confidence 99999999999999999999999999999999999998999999999999999999999999999999999999999887 Q ss_pred CccccccceEEEEeecccCcccccEEeCCeEEEEecCCCEEEEEEeeccccceeecchHHHHHHhcCCCceEEEEEcCCC Q lcl|Aclame:pro 401 NKVLTPSSFAFSSQGSNGSSNVPPIAVANIALFVQEKGSVVRDLAYSFDVDGYQGNDLTILANHLFQKHSIVDWCFSIVP 480 (823) Q Consensus 401 ~~~lTP~~~~i~~~s~~g~~~~~Pv~vg~~v~f~~~~g~~v~e~~~~~~~d~~~~~dlt~~~~hl~~~~~~~~~a~~~~p 480 (823) +++|||+|++++++|++||++|+|+.+|+.++|++++|++||||.|++++|+|++.|+|+|++||++++++++|||+++| T Consensus 401 ~~~lTP~~~~~~~~s~~g~~~~~Pv~vg~~~~Fv~~~g~~vre~~~~~~~d~~~~~dlT~~a~hl~~~~~i~~~a~~~~p 480 (823) T protein:vir:95 401 NKVLTPSSFAFSSQGSNGSSNVPPIAVANIALFVQEKGSVVRDLAYSFDVDGYQGNDLTILANHLFQKHSIVDWCFSIVP 480 (823) T ss_pred CcccceeeEEEEEeeccccccccceEeCCeEEEEecCCCEEEEEEEeeecCceecchhhhhhhhhcCCCceEEEEEecCC Confidence 78999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred cEEEEEEeCCCeEEEEEEeccccceeEEeeccCCceEEEEEEecCCCCEEEEEEEecCCCcEEEEEEeeccccCCcccce Q lcl|Aclame:pro 481 YSSAFCIRDDGKLLVMTYLRDQQVFAWAPQSSTGKYESTCSISEGNEDAVYFVVNRTVNGQTVRYIERLSSRLFTSDEDA 560 (823) Q Consensus 481 ~~~~~~~~~dg~l~~~ty~~~q~v~aW~~w~~~g~~~~~~~~~~~~~d~l~~~v~r~~~g~~~~~~e~~~~~~~~~~~~~ 560 (823) ++++||+++||+|++|+|++||+|.|||||+++|+|+++|+++++.+|+|||+|+|++||+.++|||||+++++...+++ T Consensus 481 ~~~~~~v~~dG~l~~~ty~~~q~v~aW~~~~~~g~~~~~~~i~~~~~d~l~~~v~R~i~g~~~~yiE~~~~~~~~~~~~~ 560 (823) T protein:vir:95 481 YSSAFCIRDDGKLLVMTYLRDQQVFAWAPQSSTGKYESTCSISEGNEDAVYFVVNRTVNGQTVRYIERLSSRLFTSDEDA 560 (823) T ss_pred CeEEEEEecCCcEEEEEEecccceeeeEEEecCCcEEEEEEecCCCCCEEEEEEEeccCCeEEEEEEeeccccCCCccce Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred eEeeeeeEEeccccceeeeEeeccccCcCccCcceEEecCCeEEcccccccEEEecccCceeEeeeEEEEEEEEeeEEec Q lcl|Aclame:pro 561 FFVDSGLSYDGRNTSDRTMTITGGSGEWDYLAEYTISVSGGAYFTSSDVGAQLQFPYTGADPDTGYEVSKELRCDIISVT 640 (823) Q Consensus 561 ~~lD~~~~y~~~~~~~~~~~~~~~~~~l~~~~~~~v~~~dg~~~~~~~vgg~i~l~~~~~~~~vG~~~~~~~~~~~~~~~ 640 (823) +||||+++|++.+....+.+++++.++|.|+++++|.++||++++...++++|+++++++.+++|++|.+++++.+.++. T Consensus 561 ~~lD~~~s~~g~~~~~~~~~l~~g~~~l~~l~g~~v~~adg~~~~~~~v~g~i~l~~~~~~~~vGl~~~~~i~~~~~~v~ 640 (823) T protein:vir:95 561 FFVDSGLSYDGRNTSDRTMTITGGSGEWDYLAEYTISVSGGAYFTSSDVGAQLQFPYTGADPDTGYEVSKELRCDIISVT 640 (823) T ss_pred eEEEEEEEeecCcccceeeEecCCCCcccccCceEEEecCcceECCccceeEEEeCcCCCccccccceEEEEEEeeceee Confidence 99999999999999888999999999999999999999999999999999999999999999999999999999999999 Q ss_pred CCCceeeEecceeeeeeeeeeeecccccceeeecccccccceEEEEeCCceeCCEEEcCCEEEecCCCcEEEECcccceE Q lcl|Aclame:pro 641 SNTAVVVRANRNVPPSLRNVATTNWQMARRTFGGLSHLEGQTVNILSDANVEPQKVVSGGAVTLESPGAVVHIGLPITAE 720 (823) Q Consensus 641 ~~~~~~~~~~~~v~~~~~~~~~~~~g~~~~~~~gl~~l~g~~v~v~~dg~~~~~~~v~~g~itl~~~~~~~~~gl~~~~~ 720 (823) .++...++..+.+++.++.+..++++.+..+++||+|||||+|+|++||+++|+++|++|+|||+.++++|||||||+++ T Consensus 641 ~~~a~~~~~~r~v~a~l~~~~t~~~~~~~~~~~gL~hleg~tv~v~~dg~~~~~~~v~~G~vtl~~~~~~v~vGl~~~~~ 720 (823) T protein:vir:95 641 SNTAVVVRANRNVPPSLRNVATTNWQMARRTFGGLSHLEGQTVNILSDANVEPQKVVSGGAVTLESPGAVVHIGLPITAE 720 (823) T ss_pred CCceEEEccCCcccceeeeeeccccccccceeeeccccccceEEEEEcCeeeCCeEecCCEEEecCCCCEEEEeecceee Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred EEEcceecCCCCcccccceeEeeEEEEEEccccEEEecCCCceeEeeccCCCcCCCCCCcccceEEEEecCCcCCccEEE Q lcl|Aclame:pro 721 FETLDININGQETLLDKKQVIPSVTLVVNASRGIWATTPGGKWYEYPQREFEFYDDPVDDATGKVEVKLDSNWGKNGRVK 800 (823) Q Consensus 721 ~~~l~~~~~~~~~~~~~~~~i~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tg~~~~~~~~~~~~~~~~~ 800 (823) ++|||++++++|++|||+|||++|++||++|+|+++|++.++|+|+|+|++++|++||+||||++++.+++||+++++|+ T Consensus 721 ~~~l~~~~~~~g~~~g~~~ri~~~~~~~~~s~~~~~g~~~~~l~~~~~r~~~~~~~~~~~~tG~~~~~~~~~~~~~~~~~ 800 (823) T protein:vir:95 721 FETLDININGQETLLDKKQVIPSVTLVVNASRGIWATTPGGKWYEYPQREFEFYDDPVDDATGKVEVKLDSNWGKNGRVK 800 (823) T ss_pred EEecchhcCCCcccCCceeEEeEEEEEEEeeeeEEEecCCCceeEeeccCCCcccCCCCcccceEEEecCCCcCCccEEE Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred EEEcCCCCEEEEEEEEEEEecCC Q lcl|Aclame:pro 801 IRQLDPLPLSVLAVIPRLTVGGF 823 (823) Q Consensus 801 i~q~~P~P~tvla~~~~~~~~g~ 823 (823) |+|++|||||||||+++|++||| T Consensus 801 i~q~~plp~tvl~v~~~~~~~g~ 823 (823) T protein:vir:95 801 IRQLDPLPLSVLAVIPRLTVGGF 823 (823) T ss_pred EEEcCCCceEEEEEEEEEEecCC Confidence 99999999999999999999999 No 2 >protein:vir:7329 Length: 825 # NCBI annotation: hypothetical protein # Family: family:all:780 # MgeID: mge:143 # MgeName: epsilon15 # Cross-refs: genbank:acc:NP_848220;genbank:gi:30387391;genbank:GeneID:2641863 Probab=100.00 E-value=9.2e-267 Score=1479.10 Aligned_cols=811 Identities=85% Similarity=1.324 Sum_probs=771.5 Q ss_pred CceeeeecccccccccccccccchHHHHHHHHhhhhcceeeecCCceecCcceeeeeecCCCCCceEEEEEECCCCeEEE Q lcl|Aclame:pro 1 MAISWIQPSFAGGEIGPSLYGRIDMAKYQVALRKCDNFIVRQYGGVENRPGTRFVGAAKYPNRKCRLIPFQFSTVQTYAL 80 (823) Q Consensus 1 M~~~~~q~sF~~GElsP~l~~r~Dl~ry~~q~~~~~N~~~~~~GGl~rRPGt~fva~~~~~~~~~rLipF~~~~~~~Y~l 80 (823) |||+++|+||++|||||+|++|+||+||+++|++|+||+++|+||++|||||+||++++++++++|||||.|+++|+|+| T Consensus 1 m~~~~~q~sF~~GElsP~l~gR~Dl~~y~~g~~~~~N~~~~p~Gg~~rRpGt~fva~~~~~~~~~rLipF~fs~~q~y~L 80 (825) T protein:vir:73 1 MAFSWIQPSFAGGEIGPSLYGRIDMSKYQVALRKCDNFIVRQYGGVENRPGTRFVGPAKYPDRKCRLIPFQFSTVQTYAL 80 (825) T ss_pred CccceeccccccceechhhcccchHHHHHHHHHHhcCcEEEecCCceecCchHHhHhhcCCCCCEEEEEEEeCCCcEEEE Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred EEeCCeEEEEECCceEeeccccceEEeccccccccceeEEEEeCcEEEEEeCCceEEEEEEcCCCCceeeeEEEeccccc Q lcl|Aclame:pro 81 EFGHQYMRVIKDGALVLNSSNVIYEIATPYTEADLFRIKFTQSADVLTLVHPAYPPKELRRYAHDNWQLVDVVTKNGPFE 160 (823) Q Consensus 81 ~fg~~~irV~~~~g~v~~t~~~~~~~~tPyt~~~l~~L~~~qsaD~~fIvn~~~~p~~l~r~~~~~ws~~~~~f~~~p~~ 160 (823) |||+++||||+++|+++.+++.+++++|||+++++++|+++|++|++||+|++|||++|.|.++++|++..+.|..+|+. T Consensus 81 efg~~~lrv~~~gg~v~~~~~~~~e~~TPy~~~~l~~l~~~QsaD~~~i~h~~~pp~~L~r~~~~~W~l~~~~f~~gp~~ 160 (825) T protein:vir:73 81 EFGHNYMRVIKDGAYVLTTSNVIYELAMPYADTDLFRIKFTQSADVLTLVHPAYPPKELRRYAHDNWQIVDVTTKNGPFE 160 (825) T ss_pred EEeCCeEEEEeCCceEeccCCceEEEecccchhhhhhheeeeecCEEEEEcCCCceeEEEEecCCCcEEEEEeccCCccc Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred cccccceEEEEecccCCceeeeccccccccccccceEEEcccccceecceeeeeeeeeeeeEEeccceeeeEecccceee Q lcl|Aclame:pro 161 DINIDESLTVYASASTGTITLTASASIFGAEQVGKLFYLEQPAVDSVPVWETSKSTSIGDIRRADSNYYRAVTAGKTGTL 240 (823) Q Consensus 161 ~i~~~~s~t~t~~a~t~~~Tvtas~~~~~a~~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~ 240 (823) .+|.+.+.+.++++.++.+|++++.+.+.++++|..+++..........|.....+......+.++..+.+...++++++ T Consensus 161 ~in~~~sv~v~asg~tg~~TiTaS~a~~~~~~vG~~i~~~~~~v~si~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~t~ 240 (825) T protein:vir:73 161 DINVDETVKVYASASTGTITLTASSAIFGAEQVGKLFYLEQPAVDSVPVWETSKTTAINDVRRADSNYYRANTSGKTGTL 240 (825) T ss_pred cccccccceeeecccCceeEEEeeccccCchhcCeEEEEecccccccceeeeeeEEEeeeEEECCCceeeeeccccccee Confidence 99999999999999999999999999999999999999999999999999998888888899999999999999999999 Q ss_pred cccccCceEEEEeceeccccceEEEEEEecCccEEEEEEecCc--cccccEEEEeeccccccccCcceecccCcccCCCC Q lcl|Aclame:pro 241 RPSHTEGTSWDGWGGSGDDDTGIEWEYLHSGFGIARITAVNGT--TATAEVISYIPSQVVGEDNASYKWAKYAWNSVNGY 318 (823) Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~~~--~~~~~~~~~~~~~~~~~~~~t~~~~~~~w~~~~g~ 318 (823) .+++..+..|..+.+...++.+..|.++..+.|.++++++.+. ...+.....+++.++....++++|++..|++++|| T Consensus 241 ~~~a~~g~~~~~~~g~~~~~~~~~~~~~~~~~g~~~it~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~~gy 320 (825) T protein:vir:73 241 RPSHTEGMSWDGWGGTGSDDTGIQWEYLHSGFGIAKITAVAGDGLTATADVVSFIPSQVVGSANASYKWAKYAWNSVNGY 320 (825) T ss_pred eccccCCceeEeeeeecccCCceEEEEEecCCceEEEeeccccceeeccccceecccccccCCCCCcccccCCcccCCCC Confidence 9999999999999999899999999999999999999998764 34556667788888899999999999999999999 Q ss_pred ccEEEEEeceEEEEeCcCCCcEEEEEcccCcccccccccCCCCCcEEEEEcCCCceEEEEEeecCcEEEEecCcEEEEec Q lcl|Aclame:pro 319 PGTVVYYQQRLYFAASTAFPQTIWASRTGDYKDFGKSNPTQDDDRIIYTYAGRQVNEIRHLIDVGSLVALTSGGEYVITG 398 (823) Q Consensus 319 Ps~v~f~q~RL~f~~~~~~p~~V~~Sr~gdy~nF~~~t~~~DdD~I~~~~~~~~~~~i~~~v~~~~Ll~~t~~~q~~l~~ 398 (823) |++|+||||||+|+|++++|++|||||+|||+||+++++++|||||++++++++++.|+|++++++|+|||+++||+|++ T Consensus 321 Ps~v~f~q~RL~f~g~~~~p~~v~~Srtgd~~nF~~~~~~~DdD~I~~~~s~~~~~~i~~~~~~~~L~~~t~~~e~~l~~ 400 (825) T protein:vir:73 321 PSTVVYYQQRLYFAASTAYPQTIWASRTGDYKDFGKNNPIQDDDRIIYTYAGRQVNEIRHLIDVGNLVALTSGGEYTISG 400 (825) T ss_pred ccEEEEEcceEEEeecCCCCCEEEEEccCCccccccCCCCCCCccEEEEEcCCcceeEEEEeecCcEEEEecCceEEEec Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999998 Q ss_pred CCCccccccceEEEEeecccCcccccEEeCCeEEEEecCCCEEEEEEeeccccceeecchHHHHHHhcCCCceEEEEEcC Q lcl|Aclame:pro 399 DQNKVLTPSSFAFSSQGSNGSSNVPPIAVANIALFVQEKGSVVRDLAYSFDVDGYQGNDLTILANHLFQKHSIVDWCFSI 478 (823) Q Consensus 399 ~~~~~lTP~~~~i~~~s~~g~~~~~Pv~vg~~v~f~~~~g~~v~e~~~~~~~d~~~~~dlt~~~~hl~~~~~~~~~a~~~ 478 (823) +++++|||+|++++++|++||++++|+.+|++++|+|++|++||||.|++++|+|+++|+|+|++||++++.+++|+|++ T Consensus 401 ~~~~~lTP~~~~~~~~s~~g~~~~~Pv~vg~~~~Fv~~~g~~vre~~~~~~~d~~~~~dlt~~a~hl~~~~~~~~~a~~~ 480 (825) T protein:vir:73 401 DQNKVLTPSAFSFSSQGNNGSSNVPPIAVANIALFIQEKGSVVRDLAYSFDVDGYQGTDLTILANHLFQKHSIVDWSFCI 480 (825) T ss_pred CCCcccceeeEEEEeeeeeccccccceEeCCeEEEEeCCCCeEEEEEEeeecCceeccchhhhhHhhccCCceEEEEEcC Confidence 77789999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred CCcEEEEEEeCCCeEEEEEEeccccceeEEeeccCCceEEEEEEecCCCCEEEEEEEecCCCcEEEEEEeeccccCCccc Q lcl|Aclame:pro 479 VPYSSAFCIRDDGKLLVMTYLRDQQVFAWAPQSSTGKYESTCSISEGNEDAVYFVVNRTVNGQTVRYIERLSSRLFTSDE 558 (823) Q Consensus 479 ~p~~~~~~~~~dg~l~~~ty~~~q~v~aW~~w~~~g~~~~~~~~~~~~~d~l~~~v~r~~~g~~~~~~e~~~~~~~~~~~ 558 (823) +|++++||+++||+|++|+|++||+|.|||||+++|+|+++|++++.++|+||++|+|++||+.++|||||+++++...+ T Consensus 481 ~p~~~~~~v~~dg~l~~~ty~~~q~v~aW~~~~~~g~v~~~~~i~~~~~D~l~~iV~R~~~g~~~~yiE~~~~~~~~~~~ 560 (825) T protein:vir:73 481 VPYSSAFCIRDDGKLLVLTYLRDQQVFAWAPQSSAGKYESTCSISEGSEDAVYFVVNRTINGQTVRYIERLSSRLFTNDE 560 (825) T ss_pred CCceEEEEEecCCeEEEEEEeccccceeeEEEecCCcEEEEEEecCCCccEEEEEEEEeeCCceEEEEEEecccccCCCc Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred ceeEeeeeeEEeccccceeeeEeeccccCcCccCcceEEe-cCCeEEcccccccEEEecccCceeEeeeEEEEEEEEe-- Q lcl|Aclame:pro 559 DAFFVDSGLSYDGRNTSDRTMTITGGSGEWDYLAEYTISV-SGGAYFTSSDVGAQLQFPYTGADPDTGYEVSKELRCD-- 635 (823) Q Consensus 559 ~~~~lD~~~~y~~~~~~~~~~~~~~~~~~l~~~~~~~v~~-~dg~~~~~~~vgg~i~l~~~~~~~~vG~~~~~~~~~~-- 635 (823) |++|||||++|+|.++.. ++.|++|++|.+ +||.+ +..+.+|.|+++.+. .++||++|....... T Consensus 561 ~~~~vD~g~~~~g~~~~~----------~l~~l~g~tv~~~~~g~~-~~~v~~g~itl~~~~-~~~i~l~~~~~~~~~~~ 628 (825) T protein:vir:73 561 DAFFVDCGLSYDGRNTSS----------RTMTISGGTGDWSYQVDY-PVTVSGGAYFVNTDV-GAQIQFPYTGTDPDTNE 628 (825) T ss_pred ceeEEEEEeeecccceee----------ceeeeCCceEEEEeCCeE-EEEEcCCeEEecccc-eEEEEecccCccccccc Confidence 999999999999865431 689999999987 77776 555569999999766 579999998654332 Q ss_pred ---------eEEecCCCceeeEecceeeeeeeeeeeecccccceeeecccccccceEEEEeCCceeCCEEEcCCEEEecC Q lcl|Aclame:pro 636 ---------IISVTSNTAVVVRANRNVPPSLRNVATTNWQMARRTFGGLSHLEGQTVNILSDANVEPQKVVSGGAVTLES 706 (823) Q Consensus 636 ---------~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~g~~~~~~~gl~~l~g~~v~v~~dg~~~~~~~v~~g~itl~~ 706 (823) ...++..+...++..+.+++.++++..++|+.++.+++||+|||||+|+|++||+++++++|++|+||||+ T Consensus 629 ~~~~~~~~~i~~~~~~~~v~v~~~~~~~a~~~~~~~t~~~~a~~~~~gL~hLeG~~v~v~~Dg~~~~~~~V~~G~vtl~~ 708 (825) T protein:vir:73 629 PVAKELRGDIISVTSNTAVVVRFNRNVPPVLRNVATTNWQMARQTFSGLAHLEGQTVNILSDASVEPQKTVTGGAVTLES 708 (825) T ss_pred ceeceeeEEEccccCceEEEEEecccccceeeeecccCCCcchheeccccccCCceEEEEECCeeeCCeEecCcEEEecC Confidence 22344556666777788999999999999999999999999999999999999999999999999999999 Q ss_pred CCcEEEECcccceEEEEcceecCCCCcccccceeEeeEEEEEEccccEEEecCCCceeEeeccCCCcCCCCCCcccceEE Q lcl|Aclame:pro 707 PGAVVHIGLPITAEFETLDININGQETLLDKKQVIPSVTLVVNASRGIWATTPGGKWYEYPQREFEFYDDPVDDATGKVE 786 (823) Q Consensus 707 ~~~~~~~gl~~~~~~~~l~~~~~~~~~~~~~~~~i~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tg~~~ 786 (823) ++++|||||||+++|+|||||++++|++|||+|||++|++||++|+|+++|++.++|+++|+|+++++++||+||||+++ T Consensus 709 ~~~~v~vGl~y~~~~~~l~~~~~~~g~~~g~~~ri~~~~~~~~~s~~~~~g~~~~~l~~~~~r~~~~~~~~~~~~tG~~~ 788 (825) T protein:vir:73 709 PGAVVHIGLPITAEFETLDININGQETLLDKKQVIPTVTMVVNASRGIWATTPGGTWYEYPQREFEFYDDPVDDATGKVE 788 (825) T ss_pred CceEEEEeeCccceEEecccccCCCccccCccEEEEEEEEEEEeeeeEEEecCCCcceEeeccCCCcccCCCccccCcEE Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred EEecCCcCCccEEEEEEcCCCCEEEEEEEEEEEecCC Q lcl|Aclame:pro 787 VKLDSNWGKNGRVKIRQLDPLPLSVLAVIPRLTVGGF 823 (823) Q Consensus 787 ~~~~~~~~~~~~~~i~q~~P~P~tvla~~~~~~~~g~ 823 (823) |.+++||+++++|+|+|++|||||||||++++++||| T Consensus 789 ~~~~~~~~~~~~~~i~q~~PlP~tvlav~~~~~~~g~ 825 (825) T protein:vir:73 789 VKLDSNWDKNGRVKVRQLDPLPLSVLAVLPRLTVGGF 825 (825) T ss_pred EecCCCCCCccEEEEEEcCCCCEEEEEEEEEEEecCC Confidence 9999999999999999999999999999999999999 No 3 >protein:vir:107802 Length: 681 # NCBI annotation: hypothetical protein predicted by GeneMark # Family: family:all:780 # MgeID: mge:1673 # MgeName: BIP-1 # Cross-refs: genbank:acc:NP_996623;genbank:gi:45580757;genbank:GeneID:2767878 Probab=100.00 E-value=1.7e-214 Score=1192.60 Aligned_cols=679 Identities=37% Similarity=0.643 Sum_probs=588.5 Q ss_pred Cc-eeeeecccccccccccccccchHHHHHHHHhhhhcceeeecCCceecCcceeeeeecCCCCCceEEEEEECCCCeEE Q lcl|Aclame:pro 1 MA-ISWIQPSFAGGEIGPSLYGRIDMAKYQVALRKCDNFIVRQYGGVENRPGTRFVGAAKYPNRKCRLIPFQFSTVQTYA 79 (823) Q Consensus 1 M~-~~~~q~sF~~GElsP~l~~r~Dl~ry~~q~~~~~N~~~~~~GGl~rRPGt~fva~~~~~~~~~rLipF~~~~~~~Y~ 79 (823) |. ++++|+||++|||||+|++|+||+||+++|++|+||+++|+||++|||||+||++++++++++|||||.|+++|+|| T Consensus 1 m~~~~~~~~~f~~Ge~~p~l~~r~D~~~y~~~~~~~~N~~~~~~G~~~~R~g~~~~~~~~~~~~~~rlipf~~~~~~~~~ 80 (681) T protein:vir:10 1 MSNVRVLQRSFGGGEISPEMFGRIDDVKYQSGLAICRNFVVKPQGPAENRAGFAFVREVKDSAKKVRLIPFTYSVTQTMV 80 (681) T ss_pred CcceeEeeeecCCceeeeeeccchhHHHHHHHHHHhcCcEEEecCCceecChhHhhhhcCCCCCcEEEEEEEeCCCceEE Confidence 99 69999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred EEEeCCeEEEEECCceEeeccccceEEeccccccccceeEEEEeCcEEEEEeCCceEEEEEEcCCCCceeeeEEEecccc Q lcl|Aclame:pro 80 LEFGHQYMRVIKDGALVLNSSNVIYEIATPYTEADLFRIKFTQSADVLTLVHPAYPPKELRRYAHDNWQLVDVVTKNGPF 159 (823) Q Consensus 80 l~fg~~~irV~~~~g~v~~t~~~~~~~~tPyt~~~l~~L~~~qsaD~~fIvn~~~~p~~l~r~~~~~ws~~~~~f~~~p~ 159 (823) ||||+++||||.+++.++. ++.+++++|||+++++++|+|+|+||++||+|++|||++|.|.++++|+++++.|..+++ T Consensus 81 l~~g~~~~r~~~~~~~~~~-~~~~~~~~tpy~~~~l~~l~~~q~aD~~~i~h~~~~p~~L~r~~~~~W~l~~~~f~~~p~ 159 (681) T protein:vir:10 81 IELGAGYFRFHTNGGTLLD-GAVPYEIANPYAEADLFNIHYVQSADVLTLVHPNYAPRELRRLGATNWQLATIAFTSPVA 159 (681) T ss_pred EEEeCCeEEEEeCCcEEee-CcEeEEecCCCChhhhcCceEEEEcCEEEEECCCCcceEEEEccCCceEEEEEEeccccc Confidence 9999999999999999875 678999999999999999999999999999999999999999999999999999999988 Q ss_pred ccccccceEEEEecccCCceeeeccccccccccccceEEEcccccceecceeeeeeeeeeeeEEeccceeeeEeccccee Q lcl|Aclame:pro 160 EDINIDESLTVYASASTGTITLTASASIFGAEQVGKLFYLEQPAVDSVPVWETSKSTSIGDIRRADSNYYRAVTAGKTGT 239 (823) Q Consensus 160 ~~i~~~~s~t~t~~a~t~~~Tvtas~~~~~a~~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~ 239 (823) .+.+...+ ........+ ....++.....+.. .+...+... ... .....+.. T Consensus 160 ~p~~~~at----~~~~~~~~t--~~~~v~avda~t~~--------~s~~~~~~t----------vt~---~~~~~~~~-- 210 (681) T protein:vir:10 160 TPTSVTAT----SNNKGTDYT--YRYVVTALDAEGKT--------ESAPSSAGT----------CTN---NLFTNGGA-- 210 (681) T ss_pred cceeeeee----ccCCcccee--EeEEEEEeecccce--------eecCCcceE----------Eee---eeecCCcc-- Confidence 76653321 111111111 11111100000000 000000000 000 00000111 Q ss_pred ecccccCceEEEEeceeccccceEEEEEEecCccEEEEEEecCccccccEEEEeeccccccccCcceecccCcccCCCCc Q lcl|Aclame:pro 240 LRPSHTEGTSWDGWGGSGDDDTGIEWEYLHSGFGIARITAVNGTTATAEVISYIPSQVVGEDNASYKWAKYAWNSVNGYP 319 (823) Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~w~~~~g~P 319 (823) ....|....+.... ..+....+++.+. +. .......+..+..+..++.+|...+|++.+||| T Consensus 211 ------~t~~w~a~~g~~~~------~V~~~~~gi~g~i---g~---~~~~~~~~~~~~~~~~~t~~~~~~~~~~~~gyP 272 (681) T protein:vir:10 211 ------NTIAWSASSGASRY------NVYKEQGGLYGYI---GQ---TTGTSLVDDNIAPDLSVTPPIYDAVFNAAGDYP 272 (681) T ss_pred ------eeEEEEecCCceee------eecccceeEEEEe---ec---cceeeeeecccccCccccccccccccccCCCce Confidence 11233332222211 1222223344332 21 122344555666677788999999999999999 Q ss_pred cEEEEEeceEEEEeCcCCCcEEEEEcccCcccccccccCCCCCcEEEEEcCCCceEEEEEeecCcEEEEecCcEEEEecC Q lcl|Aclame:pro 320 GTVVYYQQRLYFAASTAFPQTIWASRTGDYKDFGKSNPTQDDDRIIYTYAGRQVNEIRHLIDVGSLVALTSGGEYVITGD 399 (823) Q Consensus 320 s~v~f~q~RL~f~~~~~~p~~V~~Sr~gdy~nF~~~t~~~DdD~I~~~~~~~~~~~i~~~v~~~~Ll~~t~~~q~~l~~~ 399 (823) ++|+||||||+|+|++.+|++|||||+|||+||+++++++|||||++++++.+++.|+|++++++|||||+++||.|+++ T Consensus 273 ~~v~f~q~RL~f~~~~~~p~~v~~Srsgdy~nF~~~~~~~ddD~i~~~~~~~~~~~i~~~v~~~~lli~t~~~e~~l~~~ 352 (681) T protein:vir:10 273 AAVSYFEQRRCFAGTTNKPQNIWMTRSGTESAMSYSLPVRDDDRVAFRVAAREANAIRHIVPLTELLLLTSSGEWRVASV 352 (681) T ss_pred EEEEEEcceEEEeeCCCCCcEEEEEcccCcccccccCCCCCCccEEEEEcCCcceeEEEEEecCcEEEEEcCcEEEEecC Confidence 99999999999999999999999999999999999999899999999999999999999999999999999999999987 Q ss_pred CCccccccceEEEEeecccCcccccEEeCCeEEEEecCCCEEEEEEeeccccceeecchHHHHHHhcCCCceEEEEEcCC Q lcl|Aclame:pro 400 QNKVLTPSSFAFSSQGSNGSSNVPPIAVANIALFVQEKGSVVRDLAYSFDVDGYQGNDLTILANHLFQKHSIVDWCFSIV 479 (823) Q Consensus 400 ~~~~lTP~~~~i~~~s~~g~~~~~Pv~vg~~v~f~~~~g~~v~e~~~~~~~d~~~~~dlt~~~~hl~~~~~~~~~a~~~~ 479 (823) .+++|||+|++++++|++||++|+|+.+|++++|++++|++||||.|++++|+|+++|+|++++||++++.++.|+|+++ T Consensus 353 ~~~~lTP~~~~~~~~s~~g~~~~~Pv~vg~~v~fv~~~g~~vre~~y~~~~d~~~~~dlt~~a~Hl~~~~~i~~~a~~~~ 432 (681) T protein:vir:10 353 NSDAVTPTTISVRPQSYVGATDVQPVVVNNTTIYGAARGGHVRELAYNWQANGFVTGDLSLRAAHLFDNLDILDMAYAKA 432 (681) T ss_pred CCccccceeEEEEEeeeeccccccceeeCCeEEEEecCCCEEEEEEEeeecCceeccchhhhhhhhcCCCCeEEEEEecC Confidence 67899999999999999999999999999999999999999999999999999999999999999999889999999999 Q ss_pred CcEEEEEEeCCCeEEEEEEeccccceeEEeeccCCceEEEEEEecCCCCEEEEEEEecCCCcEEEEEEeeccccCCcccc Q lcl|Aclame:pro 480 PYSSAFCIRDDGKLLVMTYLRDQQVFAWAPQSSTGKYESTCSISEGNEDAVYFVVNRTVNGQTVRYIERLSSRLFTSDED 559 (823) Q Consensus 480 p~~~~~~~~~dg~l~~~ty~~~q~v~aW~~w~~~g~~~~~~~~~~~~~d~l~~~v~r~~~g~~~~~~e~~~~~~~~~~~~ 559 (823) |++++||+++||+|++|+|++||+|+|||||+|+|+|++||+++++.+|+||++|+|+++|+.++|||||+.+.+...++ T Consensus 433 p~~~~~~v~~dg~l~~~ty~~eq~v~aW~~~~~~g~v~~v~~i~~~~~d~l~~vv~r~~~g~~~~yie~~~~~~~~~~~~ 512 (681) T protein:vir:10 433 PQPIVWFISSSGKLLGLTYVPEQQIGAWHQHDTDGVFESCAVVAEGNEDRLYAVVRRTIGGNEVRYVERMASRQFDAQAD 512 (681) T ss_pred CCEEEEEEecCCcEEEEEEecccceeeEEEEecCCcEEEEEEecCCCCcEEEEEEEecCCCCeEEEEEecCCcccccccc Confidence 99999999999999999999999999999999999999999999999999999999999999999999999998888899 Q ss_pred eeEeeeeeEEeccccceeeeEeeccccCcCccCcceEEecCCeEEcccccccEEEecccCceeEeeeEEEEEEEEeeEEe Q lcl|Aclame:pro 560 AFFVDSGLSYDGRNTSDRTMTITGGSGEWDYLAEYTISVSGGAYFTSSDVGAQLQFPYTGADPDTGYEVSKELRCDIISV 639 (823) Q Consensus 560 ~~~lD~~~~y~~~~~~~~~~~~~~~~~~l~~~~~~~v~~~dg~~~~~~~vgg~i~l~~~~~~~~vG~~~~~~~~~~~~~~ 639 (823) ++||||+++|++. T Consensus 513 ~~~vD~~~t~~~~------------------------------------------------------------------- 525 (681) T protein:vir:10 513 AFFVDSGLTYSGE------------------------------------------------------------------- 525 (681) T ss_pred ceEeeccccccCc------------------------------------------------------------------- Confidence 9999998776421 Q ss_pred cCCCceeeEecceeeeeeeeeeeecccccceeeecccccccceEEEEeCCceeCCEEEcCCEEEecCCCcEEEECcccce Q lcl|Aclame:pro 640 TSNTAVVVRANRNVPPSLRNVATTNWQMARRTFGGLSHLEGQTVNILSDANVEPQKVVSGGAVTLESPGAVVHIGLPITA 719 (823) Q Consensus 640 ~~~~~~~~~~~~~v~~~~~~~~~~~~g~~~~~~~gl~~l~g~~v~v~~dg~~~~~~~v~~g~itl~~~~~~~~~gl~~~~ 719 (823) +..+++||+|||||+|.|++||+++++.+|.+|.|+|+.++.++||||+|++ T Consensus 526 ----------------------------~~~~~sgl~~leG~tv~i~aDG~~~~~~~V~~G~itl~~~~~~v~VGl~Y~s 577 (681) T protein:vir:10 526 ----------------------------PVSHISGLEHLEGKTVSILADGAVHPQRVVTDGAIDLDVEAGTVHIGLPITA 577 (681) T ss_pred ----------------------------ceeeeccccCCCCcEEEEEeCCeecCcEeecCcEEEeCcCCceEEEeeecee Confidence 1225688999999999999999999999999999999999999999999999 Q ss_pred EEEEcceecCCC-CcccccceeEeeEEEEEEccccEEEecCCCceeEeeccCCCcCCCCCCcccceEEEEecCCcCCccE Q lcl|Aclame:pro 720 EFETLDININGQ-ETLLDKKQVIPSVTLVVNASRGIWATTPGGKWYEYPQREFEFYDDPVDDATGKVEVKLDSNWGKNGR 798 (823) Q Consensus 720 ~~~~l~~~~~~~-~~~~~~~~~i~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tg~~~~~~~~~~~~~~~ 798 (823) ++++||+++..+ |+.++++|||+++.||+++|.|++++++.++++++++|..+.++.|++||||++++.+.++|+++++ T Consensus 578 ~i~~lp~~~~~~~g~~~g~~~ri~rv~lr~~~S~g~~~~~~~~~l~~~~~~~~~~~g~~~~l~TG~~~v~v~~~~~~~~~ 657 (681) T protein:vir:10 578 ELQTLPVAMQLDGSFGQGRVKNINKLWLRVHRSSGIFAGPHADALTEVKQRTSEPYGSPPALKSEEIPLVLSPKWGDSGQ 657 (681) T ss_pred EEEecceeeecCCcccCCceEEEEEEEEEEEcccceEEeeCCCceEEEEEeccccccccCCccCCeEEEEeCCCcCcceE Confidence 999999999875 8899999999999999999999999999999999999998999999999999999999999999999 Q ss_pred EEEEEcCCCCEEEEEEEEEEEecC Q lcl|Aclame:pro 799 VKIRQLDPLPLSVLAVIPRLTVGG 822 (823) Q Consensus 799 ~~i~q~~P~P~tvla~~~~~~~~g 822 (823) |+|+|++||||+||||.+||++|| T Consensus 658 v~I~qd~PlP~tvlsi~~ev~vgg 681 (681) T protein:vir:10 658 LFVRQADPLPLMIVSMSAEIAIGA 681 (681) T ss_pred EEEEECCCcCEEEEEeeEEEEeeC Confidence 999999999999999999999999 No 4 >protein:vir:98487 Length: 681 # NCBI annotation: hypothetical protein predicted by GeneMark # Family: family:all:780 # MgeID: mge:1592 # MgeName: BMP-1 # Cross-refs: genbank:acc:NP_996575;genbank:gi:45569506;genbank:GeneID:2767815 Probab=100.00 E-value=1.7e-214 Score=1192.60 Aligned_cols=679 Identities=37% Similarity=0.643 Sum_probs=588.5 Q ss_pred Cc-eeeeecccccccccccccccchHHHHHHHHhhhhcceeeecCCceecCcceeeeeecCCCCCceEEEEEECCCCeEE Q lcl|Aclame:pro 1 MA-ISWIQPSFAGGEIGPSLYGRIDMAKYQVALRKCDNFIVRQYGGVENRPGTRFVGAAKYPNRKCRLIPFQFSTVQTYA 79 (823) Q Consensus 1 M~-~~~~q~sF~~GElsP~l~~r~Dl~ry~~q~~~~~N~~~~~~GGl~rRPGt~fva~~~~~~~~~rLipF~~~~~~~Y~ 79 (823) |. ++++|+||++|||||+|++|+||+||+++|++|+||+++|+||++|||||+||++++++++++|||||.|+++|+|| T Consensus 1 m~~~~~~~~~f~~Ge~~p~l~~r~D~~~y~~~~~~~~N~~~~~~G~~~~R~g~~~~~~~~~~~~~~rlipf~~~~~~~~~ 80 (681) T protein:vir:98 1 MSNVRVLQRSFGGGEISPEMFGRIDDVKYQSGLAICRNFVVKPQGPAENRAGFAFVREVKDSAKKVRLIPFTYSVTQTMV 80 (681) T ss_pred CcceeEeeeecCCceeeeeeccchhHHHHHHHHHHhcCcEEEecCCceecChhHhhhhcCCCCCcEEEEEEEeCCCceEE Confidence 99 69999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred EEEeCCeEEEEECCceEeeccccceEEeccccccccceeEEEEeCcEEEEEeCCceEEEEEEcCCCCceeeeEEEecccc Q lcl|Aclame:pro 80 LEFGHQYMRVIKDGALVLNSSNVIYEIATPYTEADLFRIKFTQSADVLTLVHPAYPPKELRRYAHDNWQLVDVVTKNGPF 159 (823) Q Consensus 80 l~fg~~~irV~~~~g~v~~t~~~~~~~~tPyt~~~l~~L~~~qsaD~~fIvn~~~~p~~l~r~~~~~ws~~~~~f~~~p~ 159 (823) ||||+++||||.+++.++. ++.+++++|||+++++++|+|+|+||++||+|++|||++|.|.++++|+++++.|..+++ T Consensus 81 l~~g~~~~r~~~~~~~~~~-~~~~~~~~tpy~~~~l~~l~~~q~aD~~~i~h~~~~p~~L~r~~~~~W~l~~~~f~~~p~ 159 (681) T protein:vir:98 81 IELGAGYFRFHTNGGTLLD-GAVPYEIANPYAEADLFNIHYVQSADVLTLVHPNYAPRELRRLGATNWQLATIAFTSPVA 159 (681) T ss_pred EEEeCCeEEEEeCCcEEee-CcEeEEecCCCChhhhcCceEEEEcCEEEEECCCCcceEEEEccCCceEEEEEEeccccc Confidence 9999999999999999875 678999999999999999999999999999999999999999999999999999999988 Q ss_pred ccccccceEEEEecccCCceeeeccccccccccccceEEEcccccceecceeeeeeeeeeeeEEeccceeeeEeccccee Q lcl|Aclame:pro 160 EDINIDESLTVYASASTGTITLTASASIFGAEQVGKLFYLEQPAVDSVPVWETSKSTSIGDIRRADSNYYRAVTAGKTGT 239 (823) Q Consensus 160 ~~i~~~~s~t~t~~a~t~~~Tvtas~~~~~a~~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~ 239 (823) .+.+...+ ........+ ....++.....+.. .+...+... ... .....+.. T Consensus 160 ~p~~~~at----~~~~~~~~t--~~~~v~avda~t~~--------~s~~~~~~t----------vt~---~~~~~~~~-- 210 (681) T protein:vir:98 160 TPTSVTAT----SNNKGTDYT--YRYVVTALDAEGKT--------ESAPSSAGT----------CTN---NLFTNGGA-- 210 (681) T ss_pred cceeeeee----ccCCcccee--EeEEEEEeecccce--------eecCCcceE----------Eee---eeecCCcc-- Confidence 76653321 111111111 11111100000000 000000000 000 00000111 Q ss_pred ecccccCceEEEEeceeccccceEEEEEEecCccEEEEEEecCccccccEEEEeeccccccccCcceecccCcccCCCCc Q lcl|Aclame:pro 240 LRPSHTEGTSWDGWGGSGDDDTGIEWEYLHSGFGIARITAVNGTTATAEVISYIPSQVVGEDNASYKWAKYAWNSVNGYP 319 (823) Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~w~~~~g~P 319 (823) ....|....+.... ..+....+++.+. +. .......+..+..+..++.+|...+|++.+||| T Consensus 211 ------~t~~w~a~~g~~~~------~V~~~~~gi~g~i---g~---~~~~~~~~~~~~~~~~~t~~~~~~~~~~~~gyP 272 (681) T protein:vir:98 211 ------NTIAWSASSGASRY------NVYKEQGGLYGYI---GQ---TTGTSLVDDNIAPDLSVTPPIYDAVFNAAGDYP 272 (681) T ss_pred ------eeEEEEecCCceee------eecccceeEEEEe---ec---cceeeeeecccccCccccccccccccccCCCce Confidence 11233332222211 1222223344332 21 122344555666677788999999999999999 Q ss_pred cEEEEEeceEEEEeCcCCCcEEEEEcccCcccccccccCCCCCcEEEEEcCCCceEEEEEeecCcEEEEecCcEEEEecC Q lcl|Aclame:pro 320 GTVVYYQQRLYFAASTAFPQTIWASRTGDYKDFGKSNPTQDDDRIIYTYAGRQVNEIRHLIDVGSLVALTSGGEYVITGD 399 (823) Q Consensus 320 s~v~f~q~RL~f~~~~~~p~~V~~Sr~gdy~nF~~~t~~~DdD~I~~~~~~~~~~~i~~~v~~~~Ll~~t~~~q~~l~~~ 399 (823) ++|+||||||+|+|++.+|++|||||+|||+||+++++++|||||++++++.+++.|+|++++++|||||+++||.|+++ T Consensus 273 ~~v~f~q~RL~f~~~~~~p~~v~~Srsgdy~nF~~~~~~~ddD~i~~~~~~~~~~~i~~~v~~~~lli~t~~~e~~l~~~ 352 (681) T protein:vir:98 273 AAVSYFEQRRCFAGTTNKPQNIWMTRSGTESAMSYSLPVRDDDRVAFRVAAREANAIRHIVPLTELLLLTSSGEWRVASV 352 (681) T ss_pred EEEEEEcceEEEeeCCCCCcEEEEEcccCcccccccCCCCCCccEEEEEcCCcceeEEEEEecCcEEEEEcCcEEEEecC Confidence 99999999999999999999999999999999999999899999999999999999999999999999999999999987 Q ss_pred CCccccccceEEEEeecccCcccccEEeCCeEEEEecCCCEEEEEEeeccccceeecchHHHHHHhcCCCceEEEEEcCC Q lcl|Aclame:pro 400 QNKVLTPSSFAFSSQGSNGSSNVPPIAVANIALFVQEKGSVVRDLAYSFDVDGYQGNDLTILANHLFQKHSIVDWCFSIV 479 (823) Q Consensus 400 ~~~~lTP~~~~i~~~s~~g~~~~~Pv~vg~~v~f~~~~g~~v~e~~~~~~~d~~~~~dlt~~~~hl~~~~~~~~~a~~~~ 479 (823) .+++|||+|++++++|++||++|+|+.+|++++|++++|++||||.|++++|+|+++|+|++++||++++.++.|+|+++ T Consensus 353 ~~~~lTP~~~~~~~~s~~g~~~~~Pv~vg~~v~fv~~~g~~vre~~y~~~~d~~~~~dlt~~a~Hl~~~~~i~~~a~~~~ 432 (681) T protein:vir:98 353 NSDAVTPTTISVRPQSYVGATDVQPVVVNNTTIYGAARGGHVRELAYNWQANGFVTGDLSLRAAHLFDNLDILDMAYAKA 432 (681) T ss_pred CCccccceeEEEEEeeeeccccccceeeCCeEEEEecCCCEEEEEEEeeecCceeccchhhhhhhhcCCCCeEEEEEecC Confidence 67899999999999999999999999999999999999999999999999999999999999999999889999999999 Q ss_pred CcEEEEEEeCCCeEEEEEEeccccceeEEeeccCCceEEEEEEecCCCCEEEEEEEecCCCcEEEEEEeeccccCCcccc Q lcl|Aclame:pro 480 PYSSAFCIRDDGKLLVMTYLRDQQVFAWAPQSSTGKYESTCSISEGNEDAVYFVVNRTVNGQTVRYIERLSSRLFTSDED 559 (823) Q Consensus 480 p~~~~~~~~~dg~l~~~ty~~~q~v~aW~~w~~~g~~~~~~~~~~~~~d~l~~~v~r~~~g~~~~~~e~~~~~~~~~~~~ 559 (823) |++++||+++||+|++|+|++||+|+|||||+|+|+|++||+++++.+|+||++|+|+++|+.++|||||+.+.+...++ T Consensus 433 p~~~~~~v~~dg~l~~~ty~~eq~v~aW~~~~~~g~v~~v~~i~~~~~d~l~~vv~r~~~g~~~~yie~~~~~~~~~~~~ 512 (681) T protein:vir:98 433 PQPIVWFISSSGKLLGLTYVPEQQIGAWHQHDTDGVFESCAVVAEGNEDRLYAVVRRTIGGNEVRYVERMASRQFDAQAD 512 (681) T ss_pred CCEEEEEEecCCcEEEEEEecccceeeEEEEecCCcEEEEEEecCCCCcEEEEEEEecCCCCeEEEEEecCCcccccccc Confidence 99999999999999999999999999999999999999999999999999999999999999999999999998888899 Q ss_pred eeEeeeeeEEeccccceeeeEeeccccCcCccCcceEEecCCeEEcccccccEEEecccCceeEeeeEEEEEEEEeeEEe Q lcl|Aclame:pro 560 AFFVDSGLSYDGRNTSDRTMTITGGSGEWDYLAEYTISVSGGAYFTSSDVGAQLQFPYTGADPDTGYEVSKELRCDIISV 639 (823) Q Consensus 560 ~~~lD~~~~y~~~~~~~~~~~~~~~~~~l~~~~~~~v~~~dg~~~~~~~vgg~i~l~~~~~~~~vG~~~~~~~~~~~~~~ 639 (823) ++||||+++|++. T Consensus 513 ~~~vD~~~t~~~~------------------------------------------------------------------- 525 (681) T protein:vir:98 513 AFFVDSGLTYSGE------------------------------------------------------------------- 525 (681) T ss_pred ceEeeccccccCc------------------------------------------------------------------- Confidence 9999998776421 Q ss_pred cCCCceeeEecceeeeeeeeeeeecccccceeeecccccccceEEEEeCCceeCCEEEcCCEEEecCCCcEEEECcccce Q lcl|Aclame:pro 640 TSNTAVVVRANRNVPPSLRNVATTNWQMARRTFGGLSHLEGQTVNILSDANVEPQKVVSGGAVTLESPGAVVHIGLPITA 719 (823) Q Consensus 640 ~~~~~~~~~~~~~v~~~~~~~~~~~~g~~~~~~~gl~~l~g~~v~v~~dg~~~~~~~v~~g~itl~~~~~~~~~gl~~~~ 719 (823) +..+++||+|||||+|.|++||+++++.+|.+|.|+|+.++.++||||+|++ T Consensus 526 ----------------------------~~~~~sgl~~leG~tv~i~aDG~~~~~~~V~~G~itl~~~~~~v~VGl~Y~s 577 (681) T protein:vir:98 526 ----------------------------PVSHISGLEHLEGKTVSILADGAVHPQRVVTDGAIDLDVEAGTVHIGLPITA 577 (681) T ss_pred ----------------------------ceeeeccccCCCCcEEEEEeCCeecCcEeecCcEEEeCcCCceEEEeeecee Confidence 1225688999999999999999999999999999999999999999999999 Q ss_pred EEEEcceecCCC-CcccccceeEeeEEEEEEccccEEEecCCCceeEeeccCCCcCCCCCCcccceEEEEecCCcCCccE Q lcl|Aclame:pro 720 EFETLDININGQ-ETLLDKKQVIPSVTLVVNASRGIWATTPGGKWYEYPQREFEFYDDPVDDATGKVEVKLDSNWGKNGR 798 (823) Q Consensus 720 ~~~~l~~~~~~~-~~~~~~~~~i~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tg~~~~~~~~~~~~~~~ 798 (823) ++++||+++..+ |+.++++|||+++.||+++|.|++++++.++++++++|..+.++.|++||||++++.+.++|+++++ T Consensus 578 ~i~~lp~~~~~~~g~~~g~~~ri~rv~lr~~~S~g~~~~~~~~~l~~~~~~~~~~~g~~~~l~TG~~~v~v~~~~~~~~~ 657 (681) T protein:vir:98 578 ELQTLPVAMQLDGSFGQGRVKNINKLWLRVHRSSGIFAGPHADALTEVKQRTSEPYGSPPALKSEEIPLVLSPKWGDSGQ 657 (681) T ss_pred EEEecceeeecCCcccCCceEEEEEEEEEEEcccceEEeeCCCceEEEEEeccccccccCCccCCeEEEEeCCCcCcceE Confidence 999999999875 8899999999999999999999999999999999999998999999999999999999999999999 Q ss_pred EEEEEcCCCCEEEEEEEEEEEecC Q lcl|Aclame:pro 799 VKIRQLDPLPLSVLAVIPRLTVGG 822 (823) Q Consensus 799 ~~i~q~~P~P~tvla~~~~~~~~g 822 (823) |+|+|++||||+||||.+||++|| T Consensus 658 v~I~qd~PlP~tvlsi~~ev~vgg 681 (681) T protein:vir:98 658 LFVRQADPLPLMIVSMSAEIAIGA 681 (681) T ss_pred EEEEECCCcCEEEEEeeEEEEeeC Confidence 999999999999999999999999 No 5 >protein:vir:107423 Length: 681 # NCBI annotation: Bbp13 # Family: family:all:780 # MgeID: mge:1537 # MgeName: BPP-1 # Cross-refs: genbank:acc:NP_958682;genbank:gi:41179374;genbank:GeneID:2717217 Probab=100.00 E-value=1.7e-214 Score=1192.60 Aligned_cols=679 Identities=37% Similarity=0.643 Sum_probs=588.5 Q ss_pred Cc-eeeeecccccccccccccccchHHHHHHHHhhhhcceeeecCCceecCcceeeeeecCCCCCceEEEEEECCCCeEE Q lcl|Aclame:pro 1 MA-ISWIQPSFAGGEIGPSLYGRIDMAKYQVALRKCDNFIVRQYGGVENRPGTRFVGAAKYPNRKCRLIPFQFSTVQTYA 79 (823) Q Consensus 1 M~-~~~~q~sF~~GElsP~l~~r~Dl~ry~~q~~~~~N~~~~~~GGl~rRPGt~fva~~~~~~~~~rLipF~~~~~~~Y~ 79 (823) |. ++++|+||++|||||+|++|+||+||+++|++|+||+++|+||++|||||+||++++++++++|||||.|+++|+|| T Consensus 1 m~~~~~~~~~f~~Ge~~p~l~~r~D~~~y~~~~~~~~N~~~~~~G~~~~R~g~~~~~~~~~~~~~~rlipf~~~~~~~~~ 80 (681) T protein:vir:10 1 MSNVRVLQRSFGGGEISPEMFGRIDDVKYQSGLAICRNFVVKPQGPAENRAGFAFVREVKDSAKKVRLIPFTYSVTQTMV 80 (681) T ss_pred CcceeEeeeecCCceeeeeeccchhHHHHHHHHHHhcCcEEEecCCceecChhHhhhhcCCCCCcEEEEEEEeCCCceEE Confidence 99 69999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred EEEeCCeEEEEECCceEeeccccceEEeccccccccceeEEEEeCcEEEEEeCCceEEEEEEcCCCCceeeeEEEecccc Q lcl|Aclame:pro 80 LEFGHQYMRVIKDGALVLNSSNVIYEIATPYTEADLFRIKFTQSADVLTLVHPAYPPKELRRYAHDNWQLVDVVTKNGPF 159 (823) Q Consensus 80 l~fg~~~irV~~~~g~v~~t~~~~~~~~tPyt~~~l~~L~~~qsaD~~fIvn~~~~p~~l~r~~~~~ws~~~~~f~~~p~ 159 (823) ||||+++||||.+++.++. ++.+++++|||+++++++|+|+|+||++||+|++|||++|.|.++++|+++++.|..+++ T Consensus 81 l~~g~~~~r~~~~~~~~~~-~~~~~~~~tpy~~~~l~~l~~~q~aD~~~i~h~~~~p~~L~r~~~~~W~l~~~~f~~~p~ 159 (681) T protein:vir:10 81 IELGAGYFRFHTNGGTLLD-GAVPYEIANPYAEADLFNIHYVQSADVLTLVHPNYAPRELRRLGATNWQLATIAFTSPVA 159 (681) T ss_pred EEEeCCeEEEEeCCcEEee-CcEeEEecCCCChhhhcCceEEEEcCEEEEECCCCcceEEEEccCCceEEEEEEeccccc Confidence 9999999999999999875 678999999999999999999999999999999999999999999999999999999988 Q ss_pred ccccccceEEEEecccCCceeeeccccccccccccceEEEcccccceecceeeeeeeeeeeeEEeccceeeeEeccccee Q lcl|Aclame:pro 160 EDINIDESLTVYASASTGTITLTASASIFGAEQVGKLFYLEQPAVDSVPVWETSKSTSIGDIRRADSNYYRAVTAGKTGT 239 (823) Q Consensus 160 ~~i~~~~s~t~t~~a~t~~~Tvtas~~~~~a~~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~ 239 (823) .+.+...+ ........+ ....++.....+.. .+...+... ... .....+.. T Consensus 160 ~p~~~~at----~~~~~~~~t--~~~~v~avda~t~~--------~s~~~~~~t----------vt~---~~~~~~~~-- 210 (681) T protein:vir:10 160 TPTSVTAT----SNNKGTDYT--YRYVVTALDAEGKT--------ESAPSSAGT----------CTN---NLFTNGGA-- 210 (681) T ss_pred cceeeeee----ccCCcccee--EeEEEEEeecccce--------eecCCcceE----------Eee---eeecCCcc-- Confidence 76653321 111111111 11111100000000 000000000 000 00000111 Q ss_pred ecccccCceEEEEeceeccccceEEEEEEecCccEEEEEEecCccccccEEEEeeccccccccCcceecccCcccCCCCc Q lcl|Aclame:pro 240 LRPSHTEGTSWDGWGGSGDDDTGIEWEYLHSGFGIARITAVNGTTATAEVISYIPSQVVGEDNASYKWAKYAWNSVNGYP 319 (823) Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~w~~~~g~P 319 (823) ....|....+.... ..+....+++.+. +. .......+..+..+..++.+|...+|++.+||| T Consensus 211 ------~t~~w~a~~g~~~~------~V~~~~~gi~g~i---g~---~~~~~~~~~~~~~~~~~t~~~~~~~~~~~~gyP 272 (681) T protein:vir:10 211 ------NTIAWSASSGASRY------NVYKEQGGLYGYI---GQ---TTGTSLVDDNIAPDLSVTPPIYDAVFNAAGDYP 272 (681) T ss_pred ------eeEEEEecCCceee------eecccceeEEEEe---ec---cceeeeeecccccCccccccccccccccCCCce Confidence 11233332222211 1222223344332 21 122344555666677788999999999999999 Q ss_pred cEEEEEeceEEEEeCcCCCcEEEEEcccCcccccccccCCCCCcEEEEEcCCCceEEEEEeecCcEEEEecCcEEEEecC Q lcl|Aclame:pro 320 GTVVYYQQRLYFAASTAFPQTIWASRTGDYKDFGKSNPTQDDDRIIYTYAGRQVNEIRHLIDVGSLVALTSGGEYVITGD 399 (823) Q Consensus 320 s~v~f~q~RL~f~~~~~~p~~V~~Sr~gdy~nF~~~t~~~DdD~I~~~~~~~~~~~i~~~v~~~~Ll~~t~~~q~~l~~~ 399 (823) ++|+||||||+|+|++.+|++|||||+|||+||+++++++|||||++++++.+++.|+|++++++|||||+++||.|+++ T Consensus 273 ~~v~f~q~RL~f~~~~~~p~~v~~Srsgdy~nF~~~~~~~ddD~i~~~~~~~~~~~i~~~v~~~~lli~t~~~e~~l~~~ 352 (681) T protein:vir:10 273 AAVSYFEQRRCFAGTTNKPQNIWMTRSGTESAMSYSLPVRDDDRVAFRVAAREANAIRHIVPLTELLLLTSSGEWRVASV 352 (681) T ss_pred EEEEEEcceEEEeeCCCCCcEEEEEcccCcccccccCCCCCCccEEEEEcCCcceeEEEEEecCcEEEEEcCcEEEEecC Confidence 99999999999999999999999999999999999999899999999999999999999999999999999999999987 Q ss_pred CCccccccceEEEEeecccCcccccEEeCCeEEEEecCCCEEEEEEeeccccceeecchHHHHHHhcCCCceEEEEEcCC Q lcl|Aclame:pro 400 QNKVLTPSSFAFSSQGSNGSSNVPPIAVANIALFVQEKGSVVRDLAYSFDVDGYQGNDLTILANHLFQKHSIVDWCFSIV 479 (823) Q Consensus 400 ~~~~lTP~~~~i~~~s~~g~~~~~Pv~vg~~v~f~~~~g~~v~e~~~~~~~d~~~~~dlt~~~~hl~~~~~~~~~a~~~~ 479 (823) .+++|||+|++++++|++||++|+|+.+|++++|++++|++||||.|++++|+|+++|+|++++||++++.++.|+|+++ T Consensus 353 ~~~~lTP~~~~~~~~s~~g~~~~~Pv~vg~~v~fv~~~g~~vre~~y~~~~d~~~~~dlt~~a~Hl~~~~~i~~~a~~~~ 432 (681) T protein:vir:10 353 NSDAVTPTTISVRPQSYVGATDVQPVVVNNTTIYGAARGGHVRELAYNWQANGFVTGDLSLRAAHLFDNLDILDMAYAKA 432 (681) T ss_pred CCccccceeEEEEEeeeeccccccceeeCCeEEEEecCCCEEEEEEEeeecCceeccchhhhhhhhcCCCCeEEEEEecC Confidence 67899999999999999999999999999999999999999999999999999999999999999999889999999999 Q ss_pred CcEEEEEEeCCCeEEEEEEeccccceeEEeeccCCceEEEEEEecCCCCEEEEEEEecCCCcEEEEEEeeccccCCcccc Q lcl|Aclame:pro 480 PYSSAFCIRDDGKLLVMTYLRDQQVFAWAPQSSTGKYESTCSISEGNEDAVYFVVNRTVNGQTVRYIERLSSRLFTSDED 559 (823) Q Consensus 480 p~~~~~~~~~dg~l~~~ty~~~q~v~aW~~w~~~g~~~~~~~~~~~~~d~l~~~v~r~~~g~~~~~~e~~~~~~~~~~~~ 559 (823) |++++||+++||+|++|+|++||+|+|||||+|+|+|++||+++++.+|+||++|+|+++|+.++|||||+.+.+...++ T Consensus 433 p~~~~~~v~~dg~l~~~ty~~eq~v~aW~~~~~~g~v~~v~~i~~~~~d~l~~vv~r~~~g~~~~yie~~~~~~~~~~~~ 512 (681) T protein:vir:10 433 PQPIVWFISSSGKLLGLTYVPEQQIGAWHQHDTDGVFESCAVVAEGNEDRLYAVVRRTIGGNEVRYVERMASRQFDAQAD 512 (681) T ss_pred CCEEEEEEecCCcEEEEEEecccceeeEEEEecCCcEEEEEEecCCCCcEEEEEEEecCCCCeEEEEEecCCcccccccc Confidence 99999999999999999999999999999999999999999999999999999999999999999999999998888899 Q ss_pred eeEeeeeeEEeccccceeeeEeeccccCcCccCcceEEecCCeEEcccccccEEEecccCceeEeeeEEEEEEEEeeEEe Q lcl|Aclame:pro 560 AFFVDSGLSYDGRNTSDRTMTITGGSGEWDYLAEYTISVSGGAYFTSSDVGAQLQFPYTGADPDTGYEVSKELRCDIISV 639 (823) Q Consensus 560 ~~~lD~~~~y~~~~~~~~~~~~~~~~~~l~~~~~~~v~~~dg~~~~~~~vgg~i~l~~~~~~~~vG~~~~~~~~~~~~~~ 639 (823) ++||||+++|++. T Consensus 513 ~~~vD~~~t~~~~------------------------------------------------------------------- 525 (681) T protein:vir:10 513 AFFVDSGLTYSGE------------------------------------------------------------------- 525 (681) T ss_pred ceEeeccccccCc------------------------------------------------------------------- Confidence 9999998776421 Q ss_pred cCCCceeeEecceeeeeeeeeeeecccccceeeecccccccceEEEEeCCceeCCEEEcCCEEEecCCCcEEEECcccce Q lcl|Aclame:pro 640 TSNTAVVVRANRNVPPSLRNVATTNWQMARRTFGGLSHLEGQTVNILSDANVEPQKVVSGGAVTLESPGAVVHIGLPITA 719 (823) Q Consensus 640 ~~~~~~~~~~~~~v~~~~~~~~~~~~g~~~~~~~gl~~l~g~~v~v~~dg~~~~~~~v~~g~itl~~~~~~~~~gl~~~~ 719 (823) +..+++||+|||||+|.|++||+++++.+|.+|.|+|+.++.++||||+|++ T Consensus 526 ----------------------------~~~~~sgl~~leG~tv~i~aDG~~~~~~~V~~G~itl~~~~~~v~VGl~Y~s 577 (681) T protein:vir:10 526 ----------------------------PVSHISGLEHLEGKTVSILADGAVHPQRVVTDGAIDLDVEAGTVHIGLPITA 577 (681) T ss_pred ----------------------------ceeeeccccCCCCcEEEEEeCCeecCcEeecCcEEEeCcCCceEEEeeecee Confidence 1225688999999999999999999999999999999999999999999999 Q ss_pred EEEEcceecCCC-CcccccceeEeeEEEEEEccccEEEecCCCceeEeeccCCCcCCCCCCcccceEEEEecCCcCCccE Q lcl|Aclame:pro 720 EFETLDININGQ-ETLLDKKQVIPSVTLVVNASRGIWATTPGGKWYEYPQREFEFYDDPVDDATGKVEVKLDSNWGKNGR 798 (823) Q Consensus 720 ~~~~l~~~~~~~-~~~~~~~~~i~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tg~~~~~~~~~~~~~~~ 798 (823) ++++||+++..+ |+.++++|||+++.||+++|.|++++++.++++++++|..+.++.|++||||++++.+.++|+++++ T Consensus 578 ~i~~lp~~~~~~~g~~~g~~~ri~rv~lr~~~S~g~~~~~~~~~l~~~~~~~~~~~g~~~~l~TG~~~v~v~~~~~~~~~ 657 (681) T protein:vir:10 578 ELQTLPVAMQLDGSFGQGRVKNINKLWLRVHRSSGIFAGPHADALTEVKQRTSEPYGSPPALKSEEIPLVLSPKWGDSGQ 657 (681) T ss_pred EEEecceeeecCCcccCCceEEEEEEEEEEEcccceEEeeCCCceEEEEEeccccccccCCccCCeEEEEeCCCcCcceE Confidence 999999999875 8899999999999999999999999999999999999998999999999999999999999999999 Q ss_pred EEEEEcCCCCEEEEEEEEEEEecC Q lcl|Aclame:pro 799 VKIRQLDPLPLSVLAVIPRLTVGG 822 (823) Q Consensus 799 ~~i~q~~P~P~tvla~~~~~~~~g 822 (823) |+|+|++||||+||||.+||++|| T Consensus 658 v~I~qd~PlP~tvlsi~~ev~vgg 681 (681) T protein:vir:10 658 LFVRQADPLPLMIVSMSAEIAIGA 681 (681) T ss_pred EEEEECCCcCEEEEEeeEEEEeeC Confidence 999999999999999999999999 No 6 >protein:vir:103790 Length: 768 # NCBI annotation: hypothetical protein # Family: family:all:780 # MgeID: mge:1645 # MgeName: BcepC6B # Cross-refs: genbank:acc:YP_024932;genbank:gi:48697202;genbank:GeneID:2846114 Probab=100.00 E-value=2.4e-212 Score=1180.77 Aligned_cols=723 Identities=33% Similarity=0.565 Sum_probs=647.2 Q ss_pred Cc-eeeeecccccccccccccccchHHHHHHHHhhhhcceeeecCCceecCcceeeeeecCCCCCceEEEEEECCCCeEE Q lcl|Aclame:pro 1 MA-ISWIQPSFAGGEIGPSLYGRIDMAKYQVALRKCDNFIVRQYGGVENRPGTRFVGAAKYPNRKCRLIPFQFSTVQTYA 79 (823) Q Consensus 1 M~-~~~~q~sF~~GElsP~l~~r~Dl~ry~~q~~~~~N~~~~~~GGl~rRPGt~fva~~~~~~~~~rLipF~~~~~~~Y~ 79 (823) |+ ++++|+||++|||||+|++|+||+||++||++|+||+++|+|||+|||||+||+++++.++++|||||.|+++|+|+ T Consensus 1 M~~~~~~~~~F~~GelsP~l~~r~Dl~ry~~~~~~~~N~~~~~~gGl~rRpGt~fv~~~~~~~~~~~lipf~~~~~~~y~ 80 (768) T protein:vir:10 1 MPKAAPQQVSFDAGELSPLLGARVDLAKYPNGCQVMENFIATVQGPAIRRGGKRFVAATKDSTKQSWLLPFIVADGIAYM 80 (768) T ss_pred CCcceeeeeeccCceechhhcccchHHHHHHHHhhhhcceeeecCCceecCchhhhhhhcCCCCCeeEEEEEecCccEEE Confidence 99 79999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred EEEeCCeEEEEECCceEeeccccceEEecccccccc------ceeEEEEeCcEEEEEeCCceEEEEEEcCCCCceeeeEE Q lcl|Aclame:pro 80 LEFGHQYMRVIKDGALVLNSSNVIYEIATPYTEADL------FRIKFTQSADVLTLVHPAYPPKELRRYAHDNWQLVDVV 153 (823) Q Consensus 80 l~fg~~~irV~~~~g~v~~t~~~~~~~~tPyt~~~l------~~L~~~qsaD~~fIvn~~~~p~~l~r~~~~~ws~~~~~ 153 (823) |||++++||||+++|+++. .+.++++++||+++++ .+|+++|+||++||+|++|||++|.|.++++|+++.+. T Consensus 81 l~fg~~~irv~~~~g~v~~-~~~~~e~~tp~~~~~l~~~~~~~~L~~~q~aD~~~i~~~~~~p~~l~r~~~~~w~l~~~~ 159 (768) T protein:vir:10 81 LEFGDHYIRFFVNRGQLVN-AGAPVEIATPYALADLTTEDGTFAIRATQSADTMYLFHGGYPTQKLLRTSATTFSLQPVT 159 (768) T ss_pred EEEcCCEEEEEECCcEEEe-cCeeEEEEcCCCcceeecccccceeEEEeecCEEEEEcCCcceeEEEEecCCCceeEEee Confidence 9999999999999999875 5779999999998887 46999999999999999999999999999999999999 Q ss_pred EeccccccccccceEEEEecccCCceeeeccccccccccccceEEEcccccceecceeeeeeeeeeeeEEeccceeeeEe Q lcl|Aclame:pro 154 TKNGPFEDINIDESLTVYASASTGTITLTASASIFGAEQVGKLFYLEQPAVDSVPVWETSKSTSIGDIRRADSNYYRAVT 233 (823) Q Consensus 154 f~~~p~~~i~~~~s~t~t~~a~t~~~Tvtas~~~~~a~~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (823) |..+|+..++.+.+++.+.++.++.+|++++.+.+.+++++..+++..........|.+...+........+++.+.... T Consensus 160 ~~~gp~~~~n~~~~vti~~s~~~~~~T~tasa~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 239 (768) T protein:vir:10 160 FVGGPFAAVNSDNNVRVHASAGTGAVTLVASASVFRPSDVGTLFYLEQEDNSFVKPWVVHQKIGPSELRRVGDRVYLCTA 239 (768) T ss_pred ecCccccccccceeEEEEecccceeEEEeecCCccchhhcceeeeeeeeccccccccEEEEeeeeEEEEecCCceEEeee Confidence 99999999999999999999999999999999999999999999998888777778877777766666666666665555 Q ss_pred ccc-----ceeecccccCceEEEEeceecc-----ccceEEEEEEecCccEEEEEEecCccccc-cEEEEee------cc Q lcl|Aclame:pro 234 AGK-----TGTLRPSHTEGTSWDGWGGSGD-----DDTGIEWEYLHSGFGIARITAVNGTTATA-EVISYIP------SQ 296 (823) Q Consensus 234 ~~~-----t~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~g~~~~t~~~~~~~~~-~~~~~~~------~~ 296 (823) .++ +.+..+.+..+..|....+... .+.+..|.+...+.+..+++++.+.+... .....++ .. T Consensus 240 ~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~t~~~~~~~~~~~~~~~~~~~ 319 (768) T protein:vir:10 240 VGTATPQVTGTETPTHTSGSRWDGTGQDESATDEYGSIGAEWEYQHSGYGTVLITGYTNDQVVTGTVATNDPADPGMLPN 319 (768) T ss_pred eccccccccceeccccccCceEEEecCcccccccccccceEEEEEEcCCceEEEEEecCCeeEEeeeeeecCcccccccc Confidence 443 2456677777777766544322 23455667777777888888877665432 2222222 23 Q ss_pred ccccccCcceecccCcccCCCCccEEEEEeceEEEEeCcCCCcEEEEEcccCcccccccccC--CCCCcEEEEEcCCCce Q lcl|Aclame:pro 297 VVGEDNASYKWAKYAWNSVNGYPGTVVYYQQRLYFAASTAFPQTIWASRTGDYKDFGKSNPT--QDDDRIIYTYAGRQVN 374 (823) Q Consensus 297 ~~~~~~~t~~~~~~~w~~~~g~Ps~v~f~q~RL~f~~~~~~p~~V~~Sr~gdy~nF~~~t~~--~DdD~I~~~~~~~~~~ 374 (823) .+....++|+|+...|+++||||++|+||||||+|+| |++|||||+|||+||+++++. .|||||++++++++++ T Consensus 320 ~~~~~~~t~~~~~~~~~~~~g~Ps~v~f~q~RL~f~~----~~~v~~Srtgd~~nF~~~s~~~~~DdD~I~~~~ss~~~~ 395 (768) T protein:vir:10 320 TVVTLTGTYKWARSLFNSTDGFPQMGTFWRNRLCLMR----DRWLAMSVSADFETFKTKDADQQTDDSAIVQQLNARQLN 395 (768) T ss_pred cccccCCCcccccCCCcCCCCCceEEEEEeeeEEEee----CCEEEEEcccccccccccccccccCCccEEEEecCCcce Confidence 4556788999999999999999999999999999998 578999999999999999974 4999999999999999 Q ss_pred EEEEEeecCcEEEEecCcEEEEecCC-CccccccceEEEEeecccCcccccEEeCCeEEEEecCCCEEEEEEeeccccce Q lcl|Aclame:pro 375 EIRHLIDVGSLVALTSGGEYVITGDQ-NKVLTPSSFAFSSQGSNGSSNVPPIAVANIALFVQEKGSVVRDLAYSFDVDGY 453 (823) Q Consensus 375 ~i~~~v~~~~Ll~~t~~~q~~l~~~~-~~~lTP~~~~i~~~s~~g~~~~~Pv~vg~~v~f~~~~g~~v~e~~~~~~~d~~ 453 (823) +|+|++++++|+|||+++||+|++++ +++|||+|++++++|++||++++|+.+|++++|++++|++||||.|++++|+| T Consensus 396 ~i~~~v~~~~L~i~T~~~q~~l~~~~~~~~lTP~~~~i~~~s~~g~~~~~Pv~vG~~v~fv~~~g~~vre~~y~~~~d~y 475 (768) T protein:vir:10 396 KLAWMVESDSLLIGMTGDEWVIGPANASQPVSAANLNAARRTSYGSKRIQPVQVGGTIMFVQKAGRKLRDFKYDFSSDNY 475 (768) T ss_pred eEEEEeecCcEEEEecCceEEEecCCCCcccccceEEEEEeehhcccccccEEeCCeEEEEcCCCCEEEEEEeeeecCce Confidence 99999999999999999999999864 67999999999999999999999999999999999999999999999999999 Q ss_pred eecchHHHHHHhcCCCc-----eEEEEEcCCCcEEEEEEeCCCeEEEEEEecc---ccceeEEeecc-CCceEEEEEEec Q lcl|Aclame:pro 454 QGNDLTILANHLFQKHS-----IVDWCFSIVPYSSAFCIRDDGKLLVMTYLRD---QQVFAWAPQSS-TGKYESTCSISE 524 (823) Q Consensus 454 ~~~dlt~~~~hl~~~~~-----~~~~a~~~~p~~~~~~~~~dg~l~~~ty~~~---q~v~aW~~w~~-~g~~~~~~~~~~ 524 (823) +++|+|+|++||++++. +..||++++|++++||+++||+|++|+|++| |+|+|||||++ +|.|++||++++ T Consensus 476 ~a~DlT~~a~hl~~~~~~~~~~i~~~a~~~~p~~v~~~v~~dg~l~~~ty~~e~~~q~v~aW~~~~~~~g~v~~v~~i~~ 555 (768) T protein:vir:10 476 VSTDVTKIADHITRGRAGTNSGIMSLCFQQEPHSVVWAARADGQLIGCTYDEEAGRSDVYGWHRHPDANGFVECVASMPA 555 (768) T ss_pred ecchhhhhhhhhccccCccccceeeEEEeecCCeEEEEEecCCeEEEEEEecCCCceeEEeEEEEEcCCCEEEEEEEEec Confidence 99999999999999753 8999999999999999999999999999998 78899999975 799999999985 Q ss_pred C--CCCEEEEEEEecCCCcEEEEEEeecccc--CCcccceeEeeeeeEEeccccceeeeEeeccccCcCccCcceEEecC Q lcl|Aclame:pro 525 G--NEDAVYFVVNRTVNGQTVRYIERLSSRL--FTSDEDAFFVDSGLSYDGRNTSDRTMTITGGSGEWDYLAEYTISVSG 600 (823) Q Consensus 525 ~--~~d~l~~~v~r~~~g~~~~~~e~~~~~~--~~~~~~~~~lD~~~~y~~~~~~~~~~~~~~~~~~l~~~~~~~v~~~d 600 (823) . .+|.||++|+|+++|+.++|+|+|++.+ +...++++||||+++|++.. T Consensus 556 ~~g~~d~l~~~v~r~~~g~~~~~ie~l~~~~~~~~~~~~~~~~D~~~~~~~~~--------------------------- 608 (768) T protein:vir:10 556 PDGASDDLWVIVRRQVNGQTVRYVEYLNPALQDDEPQSSAFYVDAGITYNGVP--------------------------- 608 (768) T ss_pred CCCCccEEEEEEEecCCCeEEEEEEecCcccccccccccceEeccccccCCcc--------------------------- Confidence 4 4799999999999999999999999754 45667899999987664320 Q ss_pred CeEEcccccccEEEecccCceeEeeeEEEEEEEEeeEEecCCCceeeEecceeeeeeeeeeeecccccceeeeccccccc Q lcl|Aclame:pro 601 GAYFTSSDVGAQLQFPYTGADPDTGYEVSKELRCDIISVTSNTAVVVRANRNVPPSLRNVATTNWQMARRTFGGLSHLEG 680 (823) Q Consensus 601 g~~~~~~~vgg~i~l~~~~~~~~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~g~~~~~~~gl~~l~g 680 (823) ..+++||+|||| T Consensus 609 --------------------------------------------------------------------~~~~~gl~~leg 620 (768) T protein:vir:10 609 --------------------------------------------------------------------TSTIAGLGHLEG 620 (768) T ss_pred --------------------------------------------------------------------eeeecCCCCccc Confidence 002678999999 Q ss_pred ceEEEEeCCceeCCEEEcCCEEEecCCCcEEEECcccceEEEEcceecCCC-CcccccceeEeeEEEEEEccccEEEecC Q lcl|Aclame:pro 681 QTVNILSDANVEPQKVVSGGAVTLESPGAVVHIGLPITAEFETLDININGQ-ETLLDKKQVIPSVTLVVNASRGIWATTP 759 (823) Q Consensus 681 ~~v~v~~dg~~~~~~~v~~g~itl~~~~~~~~~gl~~~~~~~~l~~~~~~~-~~~~~~~~~i~~~~~~~~~s~~~~~~~~ 759 (823) |+|.|++||+++++.+|.+|+|+|+.++.+++|||+|++++++|||++..+ |+.++++|||+++++||++|.+++++.. T Consensus 621 ~~v~v~~dG~~~~~~~v~~g~itl~~~~~~v~vG~~y~s~~~~~p~~~~~~~gs~~~~~~ri~r~~v~~~~S~~~~~~~~ 700 (768) T protein:vir:10 621 VTVAVLTDGAVHPSRTVTAGAITLDWSASIVHIGVPTTCRIQTMQLNAGAANGTAQGKTKRVTNIATRFSRSLGGVVGPT 700 (768) T ss_pred ceEEEEECCEeccCceecCCEEEeCCCCceEEEeEeeeEEEEecceEeecCCccccccceEEEEEEEEEecccceEEEec Confidence 999999999999999999999999999999999999999999999999864 8999999999999999999999999875 Q ss_pred CC--ceeEeeccCC-CcCCCCCCcccceEEEEecCCcCCccEEEEEEcCCCCEEEEEEEEEEEecCC Q lcl|Aclame:pro 760 GG--KWYEYPQREF-EFYDDPVDDATGKVEVKLDSNWGKNGRVKIRQLDPLPLSVLAVIPRLTVGGF 823 (823) Q Consensus 760 ~~--~~~~~~~~~~-~~~~~~~~~~tg~~~~~~~~~~~~~~~~~i~q~~P~P~tvla~~~~~~~~g~ 823 (823) .+ .++++++|.. +.++++++||||++++.+.++|+++++|+|+|++||||+||||.+++++|-- T Consensus 701 ~~~~~~~~~~~r~~~~~~~~~~~l~TG~~~v~~~~~~~~~~~i~i~~d~P~P~tvlsi~~~~~~nd~ 767 (768) T protein:vir:10 701 FDDNDLEQLSFRKPSNAMDRAVPLFDGDMESDWRGGYEGQSWICYQNDQPLPVTLLGFFPILDTQDD 767 (768) T ss_pred CCCCCceeeeeEecCcccCccCCcccCEEEEEecCCCCcceEEEEEECCCCCEEEEEEEEEEEEeec Confidence 43 4889999975 4689999999999999999999999999999999999999999999999999 No 7 >protein:vir:102644 Length: 594 # NCBI annotation: Hypothetical protein # Family: family:all:780 # MgeID: mge:1624 # MgeName: VP2 # Cross-refs: genbank:acc:YP_024422;genbank:gi:48696643;genbank:GeneID:2948111 Probab=100.00 E-value=1.8e-179 Score=1000.51 Aligned_cols=570 Identities=20% Similarity=0.288 Sum_probs=508.1 Q ss_pred CceeeeecccccccccccccccchHHHHHHHHhhhhcceeeecCCceecCcceeeeeecCCCCCceEEEEEECCCCeEEE Q lcl|Aclame:pro 1 MAISWIQPSFAGGEIGPSLYGRIDMAKYQVALRKCDNFIVRQYGGVENRPGTRFVGAAKYPNRKCRLIPFQFSTVQTYAL 80 (823) Q Consensus 1 M~~~~~q~sF~~GElsP~l~~r~Dl~ry~~q~~~~~N~~~~~~GGl~rRPGt~fva~~~~~~~~~rLipF~~~~~~~Y~l 80 (823) |.. ++|+||++|||||+|++|+||+||+++|++|+||+++|+||++|||||+|++.++++++++|||||.|+++|+|+| T Consensus 1 m~~-~~~~~F~~GelsP~l~~r~Dl~~y~~~~~~~~n~~~~~~G~~~rR~G~~~~~~~~~~~~~~~lipF~~s~~~~~~l 79 (594) T protein:vir:10 1 MAD-FSQTSFKGGVIAPRLQFNEYESAYHHSIEDAVNFVVTEQGSLITRCGSEEVGLCQDGEVRLFRLPAVDAPSNDVIV 79 (594) T ss_pred Cce-eeccccCcceecceeccchhHHHHHHHHhhhhceEEEecCCeecCChhHhhhhccCCCCCEEEEEEEeCCCCeEEE Confidence 886 7799999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred EEeCCeEEEEECCceEe-eccccceEEecccccc---ccceeEEEEeCcEEEEEeCCceEEEEEEcCCCCceeeeEEEec Q lcl|Aclame:pro 81 EFGHQYMRVIKDGALVL-NSSNVIYEIATPYTEA---DLFRIKFTQSADVLTLVHPAYPPKELRRYAHDNWQLVDVVTKN 156 (823) Q Consensus 81 ~fg~~~irV~~~~g~v~-~t~~~~~~~~tPyt~~---~l~~L~~~qsaD~~fIvn~~~~p~~l~r~~~~~ws~~~~~f~~ 156 (823) |||++++|||.++++++ ...+.++++++||+.+ ++.+|+|+|++|+++++|++++|++|.|.++++|.+..+.+.. T Consensus 80 e~g~~~~r~~~~~~~~v~~~~~~~~~~~tp~~~t~~~~l~~i~~tqsad~~~~~~~~~~p~~L~R~~~~~w~~~~~~~~~ 159 (594) T protein:vir:10 80 EVGNTNIAVWVNDVRQVVANTPSEWRNTIDRIQTAYDTIGDDAGAANTGRLIMVHPALQPKRLYRDNNNAWQFVNMHTGA 159 (594) T ss_pred EEcCCeEEEEecCcEEEEccCCCcccccccceeeccCCccceEEEEEeeEEEEEcCCCCceEEEEccCCCceEEecccCc Confidence 99999999999999854 4668899999999764 5889999999999999999999999999999999886543311 Q ss_pred cccccccccceEEEEecccCCceeeeccccccccccccceEEEcccccceecceeeeeeeeeeeeEEeccceeeeEeccc Q lcl|Aclame:pro 157 GPFEDINIDESLTVYASASTGTITLTASASIFGAEQVGKLFYLEQPAVDSVPVWETSKSTSIGDIRRADSNYYRAVTAGK 236 (823) Q Consensus 157 ~p~~~i~~~~s~t~t~~a~t~~~Tvtas~~~~~a~~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (823) .+. T Consensus 160 ~p~----------------------------------------------------------------------------- 162 (594) T protein:vir:10 160 VPA----------------------------------------------------------------------------- 162 (594) T ss_pred ccc----------------------------------------------------------------------------- Confidence 100 Q ss_pred ceeecccccCceEEEEeceeccccceEEEEEEecCccEEEEEEecCccccccEEEEeeccccccccCcceecccCcccCC Q lcl|Aclame:pro 237 TGTLRPSHTEGTSWDGWGGSGDDDTGIEWEYLHSGFGIARITAVNGTTATAEVISYIPSQVVGEDNASYKWAKYAWNSVN 316 (823) Q Consensus 237 t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~w~~~~ 316 (823) .|. .+ T Consensus 163 --------------------------------------------------------------------------~~~-~~ 167 (594) T protein:vir:10 163 --------------------------------------------------------------------------EWS-PS 167 (594) T ss_pred --------------------------------------------------------------------------ccc-CC Confidence 000 24 Q ss_pred CCccEEEEEeceEEEEeCcCCCcEEEEEcccCcccccccccCCCCCcEEEEEcCCCceEEEEEeecCcEEEEecCcEEEE Q lcl|Aclame:pro 317 GYPGTVVYYQQRLYFAASTAFPQTIWASRTGDYKDFGKSNPTQDDDRIIYTYAGRQVNEIRHLIDVGSLVALTSGGEYVI 396 (823) Q Consensus 317 g~Ps~v~f~q~RL~f~~~~~~p~~V~~Sr~gdy~nF~~~t~~~DdD~I~~~~~~~~~~~i~~~v~~~~Ll~~t~~~q~~l 396 (823) +||++|+||||||+|+|+++.||+|||||+|||+||+++++++|||||++++ +++.+.|+|+.+.++|+|||+++||+| T Consensus 168 ~~p~~v~f~q~RL~f~~~~~~p~~v~~Srtgd~~nF~~~~~~~ddd~i~~~~-s~~~~~~~~v~~~~~L~i~t~~~e~~l 246 (594) T protein:vir:10 168 NYPQTVGIFQNRVWYVGSPVHRTYFWATRAGKLEDIAPSTANNPNDPISFVG-IMEGTPCWIIASSDVLTIGTTINDYQL 246 (594) T ss_pred ccceEEEEEeeeEEEEeCCCCCceEEEEecccccccccCCCCCCCccEEEEE-ecccceEEEEecCCceEEEecCceEEE Confidence 6999999999999999999999999999999999999999999999999965 456666666555578999999999999 Q ss_pred ecCCCccccccceEEEEeecccCcccccEEeCCeEEEEecCCCEEEEEEeeccccceeecchHHHHHHhcC------CCc Q lcl|Aclame:pro 397 TGDQNKVLTPSSFAFSSQGSNGSSNVPPIAVANIALFVQEKGSVVRDLAYSFDVDGYQGNDLTILANHLFQ------KHS 470 (823) Q Consensus 397 ~~~~~~~lTP~~~~i~~~s~~g~~~~~Pv~vg~~v~f~~~~g~~v~e~~~~~~~d~~~~~dlt~~~~hl~~------~~~ 470 (823) +++++++|||+|++++++|.+||+.++|+.+|+.++|+|++|++||||.|++++|+|+++|||++++||+. ++. T Consensus 247 ~~~~~~~lTp~~~~~~~~s~~g~~~~~P~~vg~~~~fv~~~g~~vre~~y~~~~d~y~~~dlt~~a~hl~~~~~~~~~~~ 326 (594) T protein:vir:10 247 AASTGVSVTAATAILRRSSVQGTAAVQGIPAEEQVIFCSRNKSKVYAMNYVREQDNWIPDEMSSQAQHLFTPISSAKGAS 326 (594) T ss_pred ecCCCcccccceEEEEEeeeeccCCCcceeeCCeEEEEcCCCCEEEEEEEeeccCceeccchhhhhhhhcCccccccCce Confidence 98777899999999999999999999999999999999999999999999999999999999999999984 567 Q ss_pred eEEEEEcCCCcEEEEEEeCCCeEEEEEEeccccceeEEeecc-CCceEEEEEEecCCCCEEEEEEEe--cCCCcEEEE-- Q lcl|Aclame:pro 471 IVDWCFSIVPYSSAFCIRDDGKLLVMTYLRDQQVFAWAPQSS-TGKYESTCSISEGNEDAVYFVVNR--TVNGQTVRY-- 545 (823) Q Consensus 471 ~~~~a~~~~p~~~~~~~~~dg~l~~~ty~~~q~v~aW~~w~~-~g~~~~~~~~~~~~~d~l~~~v~r--~~~g~~~~~-- 545 (823) +++|+|+++|++++||+++||+|++++|++||+|.|||||++ +|+|+++|+|++..+|++|++|+| ++||..++| T Consensus 327 i~~~a~~~~p~~~~~~v~~dG~l~~~ty~~eq~v~aWs~~~~t~G~v~~va~i~~~~~d~l~~~V~R~~ti~g~~~~y~~ 406 (594) T protein:vir:10 327 VRRVAYISDAAKSLWVVLENGQINYCCFDRTTDTKAWTQLELSGGKVIDIAAAFNPDSDYAYVAVVRSKAINGVQKNYTV 406 (594) T ss_pred EEEEEEecCCceEEEEEeCCCeEEEEEEecccceeeeEeeccCCCcEEEEEEeecCCCCEEEEEEEECCccccceeeEEE Confidence 999999999999999999999999999999999999999995 899999999999999999999999 579999987 Q ss_pred EEeeccccCCcccceeEeeeeeEEeccccceeeeEeeccccCcCccCcceEEecCCeEEcccccccEEEecccCceeEee Q lcl|Aclame:pro 546 IERLSSRLFTSDEDAFFVDSGLSYDGRNTSDRTMTITGGSGEWDYLAEYTISVSGGAYFTSSDVGAQLQFPYTGADPDTG 625 (823) Q Consensus 546 ~e~~~~~~~~~~~~~~~lD~~~~y~~~~~~~~~~~~~~~~~~l~~~~~~~v~~~dg~~~~~~~vgg~i~l~~~~~~~~vG 625 (823) ||+|+.+......+++|+||+++|. T Consensus 407 lE~~~~~~~~~~~~~~~~d~~~~~~------------------------------------------------------- 431 (594) T protein:vir:10 407 LEKISSPRTDWKRADGWVVAQVNQN------------------------------------------------------- 431 (594) T ss_pred eecCCCccccccccceeeeeccccc------------------------------------------------------- Confidence 9999987766666666676654321 Q ss_pred eEEEEEEEEeeEEecCCCceeeEecceeeeeeeeeeeecccccceeeecccccccceEEEEeCCceeCCEEEcCCEEEec Q lcl|Aclame:pro 626 YEVSKELRCDIISVTSNTAVVVRANRNVPPSLRNVATTNWQMARRTFGGLSHLEGQTVNILSDANVEPQKVVSGGAVTLE 705 (823) Q Consensus 626 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~g~~~~~~~gl~~l~g~~v~v~~dg~~~~~~~v~~g~itl~ 705 (823) ..++||+||||++|.|++||.++++.+|.+|.|||+ T Consensus 432 --------------------------------------------~~vsgl~hLeg~tv~v~aDG~~~~~~~V~~g~itL~ 467 (594) T protein:vir:10 432 --------------------------------------------GDVLNLDRYIGRTAVIFSKYGLEAEVEVNNIGLTHR 467 (594) T ss_pred --------------------------------------------ceeecccccCCceEEEEeCCeecCCeEEcCCeeEee Confidence 113467899999999999999999999999999996 Q ss_pred ----CCCcEEEECcccceEEEEcceecCCC-CcccccceeEeeEEEEEEccccEEEecCCCcee--Eeecc-CCCcCCCC Q lcl|Aclame:pro 706 ----SPGAVVHIGLPITAEFETLDININGQ-ETLLDKKQVIPSVTLVVNASRGIWATTPGGKWY--EYPQR-EFEFYDDP 777 (823) Q Consensus 706 ----~~~~~~~~gl~~~~~~~~l~~~~~~~-~~~~~~~~~i~~~~~~~~~s~~~~~~~~~~~~~--~~~~~-~~~~~~~~ 777 (823) .++++|||||||++++++||++++++ |+.+|++|||++++|++++|.|+++|.+...++ +..++ +.+.+..+ T Consensus 468 ~~~~~~~~~v~VGl~Y~s~i~~lp~~~~~~~gs~~g~r~ri~r~~v~~~~S~g~~vg~~~~~~r~~~~~~~~~~~~~~g~ 547 (594) T protein:vir:10 468 INGYDPNTVYYVGYKMDSYFRTLTPSNGDMKKSMFGSKIRISKVQLALFDSIEPTVNGEPADDRSTDDIMDARLLDFSSN 547 (594) T ss_pred ccCCCCcceEEEeeeeeEEEEeecccccCCcccccCccEEEEEEEEEEEcceeeEECCcccccccchhhccccCCcccCc Confidence 56899999999999999999999875 899999999999999999999999987643322 11111 23456677 Q ss_pred CCcccceEEEEec-CCcCCccEEEEEEcCCCCEEEEEEEEEEEecCC Q lcl|Aclame:pro 778 VDDATGKVEVKLD-SNWGKNGRVKIRQLDPLPLSVLAVIPRLTVGGF 823 (823) Q Consensus 778 ~~~~tg~~~~~~~-~~~~~~~~~~i~q~~P~P~tvla~~~~~~~~g~ 823 (823) +++++|+.++... .||+++++|+|+|++|||||||||++||++|-. T Consensus 548 ~~~~tg~~~v~~~~~G~~~~~~i~I~qd~PlPltvlai~~ev~~~~~ 594 (594) T protein:vir:10 548 SGSSNGTRLVDYNPLGWENDGKMVIAVEQPFLCEVVGVFSVVQSNKV 594 (594) T ss_pred ccccCCceEEEEccCCcCcccEEEEEECCCcCEEEEEEEEEEEeccC Confidence 8899999988764 699999999999999999999999999999999 No 8 >protein:vir:99677 Length: 794 # NCBI annotation: Tail tubular protein B # Family: family:all:825 # MgeID: mge:1523 # MgeName: VP4 # Cross-refs: genbank:acc:YP_249591;genbank:gi:68299742;genbank:GeneID:3799992 Probab=100.00 E-value=4.6e-166 Score=927.02 Aligned_cols=713 Identities=13% Similarity=0.118 Sum_probs=531.7 Q ss_pred Cc-eeeeecccccccccccccccchHHHHHHHHhhhhcceeeecCCceecCcceeeeeecCC---CCCceEEEEEECCCC Q lcl|Aclame:pro 1 MA-ISWIQPSFAGGEIGPSLYGRIDMAKYQVALRKCDNFIVRQYGGVENRPGTRFVGAAKYP---NRKCRLIPFQFSTVQ 76 (823) Q Consensus 1 M~-~~~~q~sF~~GElsP~l~~r~Dl~ry~~q~~~~~N~~~~~~GGl~rRPGt~fva~~~~~---~~~~rLipF~~~~~~ 76 (823) |+ +++.++||++| |++|+|++||++||++|+||+++|+|||+||||++||++++++ +.++|||||+|+++| T Consensus 1 M~~i~~s~~n~~~G-----vS~q~D~~ry~~q~~~~~N~~~~~~gG~~rRpG~~fv~~l~~~~~~~~~~~l~~f~~~~~~ 75 (794) T protein:vir:99 1 MALISQSIKNLKGG-----ISQQPDILRYSDQGSKQINGFSSEVEGLQKRPPSVHIKRLTDQFGLGQKPYCHIINRDEVE 75 (794) T ss_pred Cceeeeecchhhcc-----eecCCchHHhhhhHhhhhcceeeeccCcccCCccceeeeecCCCCCccccEEEEEEeCCCc Confidence 99 68999999999 8999999999999999999999999999999999999999875 456899999999999 Q ss_pred eEEEEEeCCeEEEEECCceEeeccccceEEeccccccccceeEEEEeCcEEEEEeCCceEEEEEEc---CCCCceeeeEE Q lcl|Aclame:pro 77 TYALEFGHQYMRVIKDGALVLNSSNVIYEIATPYTEADLFRIKFTQSADVLTLVHPAYPPKELRRY---AHDNWQLVDVV 153 (823) Q Consensus 77 ~Y~l~fg~~~irV~~~~g~v~~t~~~~~~~~tPyt~~~l~~L~~~qsaD~~fIvn~~~~p~~l~r~---~~~~ws~~~~~ 153 (823) +|+|+|++++||||+..+....+...+...+.|++++++.+|+++|+||++||+|++++|+++.+. ...+|....+. T Consensus 76 ~y~l~f~~~~irv~~~~~g~~~~v~~~~~~~y~~~~~~~~~l~~~q~aD~~fi~n~~~~p~~~~~~~~~~~~~~~~~~~~ 155 (794) T protein:vir:99 76 RYAVFFTGSNIRVFDLFTGDEKTVNAPNGLSYVSSSNPRKDLRMVTVADYTFILNRNVATAQGTTNTPSGLAPFGHFGLV 155 (794) T ss_pred eEEEEEcCCeEEEEECCCCeEEEeeccccccccccCCccceeeEEEEccEEEEEcCCeeeeEeeeeccccCcCCCceEEE Confidence 999999999999998643233333444455667788888999999999999999999999988633 33445555554 Q ss_pred Eeccccccc------cccceEE-EEecccCCceeeeccccccccc-------------cccceEEEcccccceecceeee Q lcl|Aclame:pro 154 TKNGPFEDI------NIDESLT-VYASASTGTITLTASASIFGAE-------------QVGKLFYLEQPAVDSVPVWETS 213 (823) Q Consensus 154 f~~~p~~~i------~~~~s~t-~t~~a~t~~~Tvtas~~~~~a~-------------~vg~~~~~~~~~~~~~~~~~~~ 213 (823) +..+..+.. +...+.+ .++.+..+..+...+...+..+ ..+..+++............+. T Consensus 156 ~v~~g~y~~~y~v~i~gs~ta~~~tp~~~~~~~~~~~s~~~ia~~l~~~l~~~g~~v~~~~g~~~i~~~~~~~v~t~s~~ 235 (794) T protein:vir:99 156 VIRGGQYGRTYRIKVNGSVEASFETPLGDQVAHAKQIDIAYIIDQLAAGLINKGWAVTKGSGYFYFSKSGSVIINSLEVE 235 (794) T ss_pred EeccCCCCceEEEEecCCcccceeeccCcccccccccchhhhhhhhHhhhhcccceEEeCCeEEEEEecCCceeEEEEee Confidence 444333221 1111111 1122222222211111111111 1122222221111111111100 Q ss_pred eeeeeeeeEEeccceeeeE--ecccceeecccccCceEEEEeceeccccceEEEEEEecCccEEEEEEecCccccccEEE Q lcl|Aclame:pro 214 KSTSIGDIRRADSNYYRAV--TAGKTGTLRPSHTEGTSWDGWGGSGDDDTGIEWEYLHSGFGIARITAVNGTTATAEVIS 291 (823) Q Consensus 214 ~~~~~~~~~~~~~~~~~~~--~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~~~~~~~~~~~ 291 (823) .. .++...... ......++...+..+. ...+.+.........|..+....|.|++++.++... +.... T Consensus 236 ~g--------~~~t~~~~~~~~v~~~~~Lp~~~~~G~-~v~v~~~~~~~~~~y~v~~~~~~~~w~e~~~~~~~~-~~~~~ 305 (794) T protein:vir:99 236 DG--------YNGQLAWGIINDVQKTTQLPVYAPNNY-IIRVSGDPTLNQDDYYVRFDASRNVWTECPAPNIKA-DYNKA 305 (794) T ss_pred cC--------CCCceeeEEeeeccceeecccCCCCCe-EEEEeccCCCCCCceEEEEEcCCceEEeeccceeec-ceecc Confidence 00 011111111 1122233333343443 334444444434445666677889999998776543 34557 Q ss_pred EeeccccccccCcceecccCccc-------CCCCccE-------EEEEeceEEEEeCcCCCcEEEEEcccCcccccccc- Q lcl|Aclame:pro 292 YIPSQVVGEDNASYKWAKYAWNS-------VNGYPGT-------VVYYQQRLYFAASTAFPQTIWASRTGDYKDFGKSN- 356 (823) Q Consensus 292 ~~~~~~~~~~~~t~~~~~~~w~~-------~~g~Ps~-------v~f~q~RL~f~~~~~~p~~V~~Sr~gdy~nF~~~t- 356 (823) +||+.+++...++|.|++..|.+ +|+||+| |+||||||+|+++ ++|||||+||||||++++ T Consensus 306 t~p~~~v~~~~~~~~~~~~~w~~r~~Gd~~tnp~psf~g~~is~v~f~q~RL~f~~~----~~v~~Srtgd~~nF~~~t~ 381 (794) T protein:vir:99 306 TMPHVLIREADGTFTFKQADWTHRAAGDDETNPYPSFIGNSINDIFFFRNRLGFLSG----ENVILSGSGNYFNFFPESV 381 (794) T ss_pred ceEEEEeccCCCceeEeeccccccccCCcccCCCccccCcceeEEEEEeeeEEEecC----CeEEEEecCCccccccccc Confidence 79999999999999999988965 6888876 7899999999977 469999999999999997 Q ss_pred -cCCCCCcEEEEEcCCCceEEEEEeecC-cEEEEecCcEEEEecCCCccccccceEEEEeecccCc-ccccEEeCCeEEE Q lcl|Aclame:pro 357 -PTQDDDRIIYTYAGRQVNEIRHLIDVG-SLVALTSGGEYVITGDQNKVLTPSSFAFSSQGSNGSS-NVPPIAVANIALF 433 (823) Q Consensus 357 -~~~DdD~I~~~~~~~~~~~i~~~v~~~-~Ll~~t~~~q~~l~~~~~~~lTP~~~~i~~~s~~g~~-~~~Pv~vg~~v~f 433 (823) +++|||||+++++++++++|+|+++++ +|+|||+++||+|+++ ++|||+|++++++|+|+|+ .++|+.+|+++|| T Consensus 382 ~~~~DdD~I~~~~~~~~~~~i~~~v~~~~~L~l~t~~~q~~l~~~--~~lTP~~~~~~~~s~~~~~~~~~Pv~vg~~v~f 459 (794) T protein:vir:99 382 AVLTDTDPIDVAVSTNRISILKYAVPFSEELILWSDQAQFVLSSD--GGLTPTTIRLDLTTEFEVTEQARPYGIGRGVYF 459 (794) T ss_pred cCCCCCccEEEEecCCcceeeEEEeecCCcEEEEecCcEEEEeCC--CcccceeEEEEEEEEeeccCCCCceEeCCeEEE Confidence 457999999999999999999999984 8999999999999974 5899999999999999774 6999999999999 Q ss_pred EecCCCE---EEEEEeeccccceeecchHHHHHHhcCCCceEEEEEcCCCcEEEEEEeCCCeEEEEEEe---ccccceeE Q lcl|Aclame:pro 434 VQEKGSV---VRDLAYSFDVDGYQGNDLTILANHLFQKHSIVDWCFSIVPYSSAFCIRDDGKLLVMTYL---RDQQVFAW 507 (823) Q Consensus 434 ~~~~g~~---v~e~~~~~~~d~~~~~dlt~~~~hl~~~~~~~~~a~~~~p~~~~~~~~~dg~l~~~ty~---~~q~v~aW 507 (823) ++++|++ +|+|.|++++|+|++.|||+|++|||++..+.+++++++|++++|++++||+|++|+|+ +||+|+|| T Consensus 460 ~~~~g~~~~v~r~~~~~~~~d~y~a~Dlt~~~~hl~~~~~~~~~a~~~~~~~~v~~~~~~g~l~~~~y~~~~~eq~v~aW 539 (794) T protein:vir:99 460 VSPRAKFSSVRRFYAVQDVTQVKNAEDISAHVPYYVENGVFKMSGSSTENFLTILTEGNEQRVYFYKFLYLQEQLVQQSW 539 (794) T ss_pred EecCCCeeEEEEeeeeccccCceehhhHHHHHHHhcCCCeEEEEEeCCCCcEEEEEEcCCCEEEEEEEeecCCceEEEeE Confidence 9999964 45678999999999999999999999998899999999999999999999999999997 57889999 Q ss_pred EeeccCCceEEEEEEecCCCCEEEEEEEecCCCcEEEEEEeec----cccCCcccceeEeeeeeEEeccccceeeeEeec Q lcl|Aclame:pro 508 APQSSTGKYESTCSISEGNEDAVYFVVNRTVNGQTVRYIERLS----SRLFTSDEDAFFVDSGLSYDGRNTSDRTMTITG 583 (823) Q Consensus 508 ~~w~~~g~~~~~~~~~~~~~d~l~~~v~r~~~g~~~~~~e~~~----~~~~~~~~~~~~lD~~~~y~~~~~~~~~~~~~~ 583 (823) |||+|+|.++++|+.+ .+|+||++|+|+.+ .++|||+ ...+..+++++||||+++|.....+. T Consensus 540 ~~~~~~g~~~~~~~~~--~~d~l~~~v~r~~~----~~ler~~~~~~~~~~~~~~~~~~lD~~~~~~~~~~~~------- 606 (794) T protein:vir:99 540 SHWDFGVNCRVLCCDM--IGAVMHLIIDSPSG----VLMEKIEFTQNTKDYPDEPYRLYVDRKIEYTFPEGSY------- 606 (794) T ss_pred EEEEcCCCeEEEEEEE--cCCEEEEEEEeCCC----EEEEEEEeeeCCCCCCCcccceeeeeeeeeeeccccc------- Confidence 9999999999999876 47999999999866 5677765 44456677899999999885431110 Q ss_pred cccCcCccCcceEEecCCeEEcccccccEEEecccCceeEeeeEEEEEEEEeeEEecCCCceeeEecceeeeeeeeeeee Q lcl|Aclame:pro 584 GSGEWDYLAEYTISVSGGAYFTSSDVGAQLQFPYTGADPDTGYEVSKELRCDIISVTSNTAVVVRANRNVPPSLRNVATT 663 (823) Q Consensus 584 ~~~~l~~~~~~~v~~~dg~~~~~~~vgg~i~l~~~~~~~~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 663 (823) ...+ ...++ T Consensus 607 -------------~~~~----------~~~~~------------------------------------------------ 615 (794) T protein:vir:99 607 -------------NDDD----------FKTRV------------------------------------------------ 615 (794) T ss_pred -------------ccCc----------ceeEE------------------------------------------------ Confidence 0000 00000 Q ss_pred cccccceeeecccccccceEEEEeCCceeC----C--EEEcCCEEEec--CCCcEEEECcccceEEEEcceecCCC---C Q lcl|Aclame:pro 664 NWQMARRTFGGLSHLEGQTVNILSDANVEP----Q--KVVSGGAVTLE--SPGAVVHIGLPITAEFETLDININGQ---E 732 (823) Q Consensus 664 ~~g~~~~~~~gl~~l~g~~v~v~~dg~~~~----~--~~v~~g~itl~--~~~~~~~~gl~~~~~~~~l~~~~~~~---~ 732 (823) +...+.||+||||++|.+++||.+.. . .+++++.++|+ .++.+|||||+|++++++|||++..+ | T Consensus 616 ----~~~~~~g~~~l~g~~v~~~~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~vGl~y~s~~~~~~~~~~~~~~~g 691 (794) T protein:vir:99 616 ----KLKDIYGSTPANGQYVFISLGGVTFTFDPPAGGWQANDGLIEFDGDLRGTKFFVGEAYTFLYEFSKFLIKTTDTAD 691 (794) T ss_pred ----eccccccccccCCceEEEEeCCceeeeecccceEecCccEEEecCCCCCcEEEEeeeeeEEEeecceEEeecCCCC Confidence 11257889999999999999998744 2 33356778776 68999999999999999999987532 2 Q ss_pred c---ccccceeEeeEEEEEEccccEEEecCCCceeEeec---cCC---CcCCCCCCcccceEEEEecCCcCCccEEEEEE Q lcl|Aclame:pro 733 T---LLDKKQVIPSVTLVVNASRGIWATTPGGKWYEYPQ---REF---EFYDDPVDDATGKVEVKLDSNWGKNGRVKIRQ 803 (823) Q Consensus 733 ~---~~~~~~~i~~~~~~~~~s~~~~~~~~~~~~~~~~~---~~~---~~~~~~~~~~tg~~~~~~~~~~~~~~~~~i~q 803 (823) . ....++||++++|++.+|.++.+..++...+.... ++. +.....++++||++++.. .||+++++|+|+| T Consensus 692 ~~~~~~~gr~~l~r~~~~~~~tg~~~v~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~~tg~~~vp~-~g~~~~~~v~i~~ 770 (794) T protein:vir:99 692 GVATEDIGRLQLRRAWVNYDKSGNFRVEVNNQGRTFTYNMTGNRLSTNELILGDESLDTGQFRYAV-SGNATQVTVSLIS 770 (794) T ss_pred ceeeeccceEEEEEEEEEeecccceEEEECCCccceeeeccccccccccccccccccccceEEEEe-cccccceEEEEEE Confidence 1 12345789999999999999999765443222211 222 222334679999999987 5799999999999 Q ss_pred cCCCCEEEEEEEEEEEecCC Q lcl|Aclame:pro 804 LDPLPLSVLAVIPRLTVGGF 823 (823) Q Consensus 804 ~~P~P~tvla~~~~~~~~g~ 823 (823) ++||||+||||.+|...|=. T Consensus 771 d~P~P~tvlsi~~e~~y~~r 790 (794) T protein:vir:99 771 DTPNPLSIIGGGWEGYYVRR 790 (794) T ss_pred CCCCCEEEEEEEEEEEEecc Confidence 99999999999999999988 No 9 >protein:vir:94713 Length: 785 # NCBI annotation: tail tube # Family: family:all:825 # MgeID: mge:1528 # MgeName: K1F # Cross-refs: genbank:acc:YP_338122;genbank:gi:77118200;genbank:GeneID:3707736 Probab=100.00 E-value=1.8e-164 Score=918.24 Aligned_cols=710 Identities=15% Similarity=0.153 Sum_probs=530.3 Q ss_pred Cc-eeeeecccccccccccccccchHHHHHHHHhhhhcceeeecCCceecCcceeeeeecCCC-CCceEEEEEECCCCeE Q lcl|Aclame:pro 1 MA-ISWIQPSFAGGEIGPSLYGRIDMAKYQVALRKCDNFIVRQYGGVENRPGTRFVGAAKYPN-RKCRLIPFQFSTVQTY 78 (823) Q Consensus 1 M~-~~~~q~sF~~GElsP~l~~r~Dl~ry~~q~~~~~N~~~~~~GGl~rRPGt~fva~~~~~~-~~~rLipF~~~~~~~Y 78 (823) |+ +.+.++||.+| +++|+|++||++||++|+||+++|+||++||||++||++++... +..++++|+|+++|+| T Consensus 1 M~~~~~s~~n~~~G-----vSqq~D~~ry~~q~~~~~N~~~~~~gG~~rRpG~~~v~~l~~~~~~~~~~~~f~~~~~~~y 75 (785) T protein:vir:94 1 MPLITQSIKNLKGG-----ISQQPDILRFSDQGEAQVNCWSSESDGLQKRPPTVFKRRLNIDVGSNPKFHLINRDEQEQY 75 (785) T ss_pred Ccceeeecchhhcc-----eecCCchHHhhhHHhhhhcceeeeccCcccCChhHhhhcccCCCCcCcEEEEEEeCCCceE Confidence 99 68999999999 99999999999999999999999999999999999999997544 5678899999999999 Q ss_pred EEEEeCCeEEEEECCceE-eeccccceEEeccccccccceeEEEEeCcEEEEEeCCceEEEEEEcCCCCceeeeEEE--- Q lcl|Aclame:pro 79 ALEFGHQYMRVIKDGALV-LNSSNVIYEIATPYTEADLFRIKFTQSADVLTLVHPAYPPKELRRYAHDNWQLVDVVT--- 154 (823) Q Consensus 79 ~l~fg~~~irV~~~~g~v-~~t~~~~~~~~tPyt~~~l~~L~~~qsaD~~fIvn~~~~p~~l~r~~~~~ws~~~~~f--- 154 (823) +|+|++++||||+++|.. ..+...+|+.+++ ...+|+++|+||++||+|++++|+++.|.++..|......| T Consensus 76 ~l~~~~~~irv~~~~G~~~~v~~~~~y~~~~~----~~~~l~~~q~aD~~fi~n~~~~~~~~~~~~~~~~~~~~~~~~~i 151 (785) T protein:vir:94 76 YIVFNGSNIQIVDLSGNQYSVSGSVDYVKSSN----PRDDIRVVTVADYTFVVNRKVVVKGGSEKSHSGYNRKARALINL 151 (785) T ss_pred EEEEcCCeEEEEecCCcEEEEecCCCceeecC----chhheeeEeeCCEEEEEcCCcceeeeeccCCcCCCCCCceEEEe Confidence 999999999999987753 3344445554443 34579999999999999999999999998776554443322 Q ss_pred eccccc-----cccccceEEEEecccCCcee--eecccc---------------ccccccccceEEEcccccceecceee Q lcl|Aclame:pro 155 KNGPFE-----DINIDESLTVYASASTGTIT--LTASAS---------------IFGAEQVGKLFYLEQPAVDSVPVWET 212 (823) Q Consensus 155 ~~~p~~-----~i~~~~s~t~t~~a~t~~~T--vtas~~---------------~~~a~~vg~~~~~~~~~~~~~~~~~~ 212 (823) ..+++. .++.....+....+.....+ ...+.. .++....+..+++..........+.+ T Consensus 152 ~~g~y~~~y~i~i~g~~~at~~t~~~s~a~~s~~~~s~~~i~~~l~~~l~a~~t~~t~~~~g~~i~i~a~s~t~~~~~s~ 231 (785) T protein:vir:94 152 RGGQYGRTLKVGINGGVKVSHKLPAGNDAENDPPKVDAQAIGAALRDLLVTAYPTFTFDLGSGFLLITAPSGTDINSVET 231 (785) T ss_pred cccccceeEEEeeCCcceeEEEEccCccccccccccchHHHHHHHHHHhhccccceeEEecCcEEEEEecCCccccceee Confidence 222221 22322222222222111111 001110 11111111222221111111111111 Q ss_pred eeeeeeeeeEEeccceeeeEe-cc-cceeecccccCceEEEEeceeccccceEEEEEEecCccEEEEEEecCccccccEE Q lcl|Aclame:pro 213 SKSTSIGDIRRADSNYYRAVT-AG-KTGTLRPSHTEGTSWDGWGGSGDDDTGIEWEYLHSGFGIARITAVNGTTATAEVI 290 (823) Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~-~~-~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~~~~~~~~~~ 290 (823) .. ..++.....+. .. ....++..+.++. ...+.+.+.......+..+....|.|++++.++... .... T Consensus 232 ~~--------~~~~t~~~~~~~~~~~~~~Lp~~~~~G~-~v~v~~~~~~~~~~y~v~~~~~~g~w~e~~~~g~~~-~~~~ 301 (785) T protein:vir:94 232 ED--------GYANQLISPVLDTVQTISKLPLAAPNGY-IIKIQGETNSSADEYYVMYDSNTKTWKETVEPGVVT-GFDN 301 (785) T ss_pred ec--------ccCCeEEEEEEeeccceeccccccCCCC-EEEEEccCCCCccceEEEEEcCCceEEEecccceee-eeec Confidence 10 11122222111 11 1222333334443 333333333333344445556778999998766543 3445 Q ss_pred EEeeccccccccCcceecccCccc-------CCCCccE-------EEEEeceEEEEeCcCCCcEEEEEcccCcccccccc Q lcl|Aclame:pro 291 SYIPSQVVGEDNASYKWAKYAWNS-------VNGYPGT-------VVYYQQRLYFAASTAFPQTIWASRTGDYKDFGKSN 356 (823) Q Consensus 291 ~~~~~~~~~~~~~t~~~~~~~w~~-------~~g~Ps~-------v~f~q~RL~f~~~~~~p~~V~~Sr~gdy~nF~~~t 356 (823) .+||+.+++..+++|+|+..+|.+ +|++|+| |+||||||+|++ |++|||||+||||||++++ T Consensus 302 ~tmp~~l~~~~~~~~~~~~~~w~~r~~Gd~~tnp~psf~g~~~~~v~f~q~RL~f~~----~~~v~~Srtgd~~nF~~~t 377 (785) T protein:vir:94 302 TTMPHALVRQSDGSFEFKALDWSKRGAGNDDTNPMPSFVDATINDVFFYRNRLGFLS----GENVIMSRSASYFAFFPKS 377 (785) T ss_pred cccceEEEeccCCceEEeccccccccCCCcccCCcceecccccceEEEEeceEEEec----CCeEEEEccCCcccCcccc Confidence 679999999999999999999975 4676654 899999999997 5689999999999999997 Q ss_pred --cCCCCCcEEEEEcCCCceEEEEEeecC-cEEEEecCcEEEEecCCCccccccceEEEEeecccC-cccccEEeCCeEE Q lcl|Aclame:pro 357 --PTQDDDRIIYTYAGRQVNEIRHLIDVG-SLVALTSGGEYVITGDQNKVLTPSSFAFSSQGSNGS-SNVPPIAVANIAL 432 (823) Q Consensus 357 --~~~DdD~I~~~~~~~~~~~i~~~v~~~-~Ll~~t~~~q~~l~~~~~~~lTP~~~~i~~~s~~g~-~~~~Pv~vg~~v~ 432 (823) +++|||||+++++++++++|+|+++++ +|+|||+++||+|+++ ++|||+|++++++|+|+| +.++|+.+|++++ T Consensus 378 ~~~~~DdD~i~~~~~~~~~~~i~~~v~~~~~L~l~T~~~e~~l~~~--~~lTP~~~~~~~~s~~~~~~~~~Pv~vg~~v~ 455 (785) T protein:vir:94 378 VATLSDDDPIDVAVSHPRISILKYAVPFSEQLLLWSDEVQFVMTSS--GVLTSKSIQLDVGSEFALGDNARPFAVGRSVF 455 (785) T ss_pred ccCCCCCccEEEEecCCcceeeEEEeecCCcEEEEecCcEEEEcCC--CcccceeEEEEEEEeeeccCCCCceEeCCeEE Confidence 456999999999999999999999996 7999999999999863 699999999999999976 5699999999999 Q ss_pred EEecCCCE--E-EEEEeeccccceeecchHHHHHHhcCCCceEEEEEcCCCcEEEEEEeCCCeEEEEEEe---cccccee Q lcl|Aclame:pro 433 FVQEKGSV--V-RDLAYSFDVDGYQGNDLTILANHLFQKHSIVDWCFSIVPYSSAFCIRDDGKLLVMTYL---RDQQVFA 506 (823) Q Consensus 433 f~~~~g~~--v-~e~~~~~~~d~~~~~dlt~~~~hl~~~~~~~~~a~~~~p~~~~~~~~~dg~l~~~ty~---~~q~v~a 506 (823) |++++|++ + |++.|++.+|+|++.|||+|++|||++..+.+++++++|++++|++++||+|++|+|+ +||+|+| T Consensus 456 f~~~~g~~~~v~r~~~~~~~~d~y~~~dlt~~~~~~~~g~~~~~~a~~~~~~~~~~~~~~~g~l~~~~y~~~~~e~~v~a 535 (785) T protein:vir:94 456 FSAPRGSFTSIKRYFAVADVSDVKDADDTTGHVLSYIPNGVFDIQGTGTENYICVNSTGAYNRIYIYKFLFKDSVQLQAS 535 (785) T ss_pred EEecCCCeeEEEeeeeecccccceehhhHHHHHHHhcCCCcEEEEEecCCCcEEEEEEcCCCEEEEEEEeecCCceEEEE Confidence 99999975 3 5558888999999999999999999999999999999999999999999999999996 8899999 Q ss_pred EEeeccCCc--eEEEEEEecCCCCEEEEEEEecCCCcEEEEEEeecccc-CCcccceeEeeeeeEEeccccceeeeEeec Q lcl|Aclame:pro 507 WAPQSSTGK--YESTCSISEGNEDAVYFVVNRTVNGQTVRYIERLSSRL-FTSDEDAFFVDSGLSYDGRNTSDRTMTITG 583 (823) Q Consensus 507 W~~w~~~g~--~~~~~~~~~~~~d~l~~~v~r~~~g~~~~~~e~~~~~~-~~~~~~~~~lD~~~~y~~~~~~~~~~~~~~ 583 (823) ||||+|+|. ++++|++ +|++|++++|. +|.+++|+|++.... +...++++||||+++|..... T Consensus 536 W~r~~~~~~~~~~~~~~~----~d~~~~vv~r~-~g~~~~~ie~~~~~~d~~~~~~~~~lD~~~~~~~~~~--------- 601 (785) T protein:vir:94 536 WSHWEFPKDDKILASASI----GSTMFIVRQHQ-GGVDIEHLKFIKEATDFPSEPYRLHVDSKVSMVIPIG--------- 601 (785) T ss_pred EEEEEeCCCeEEEEEEEe----CCEEEEEEEcC-CCEEEEEEEeecccCCCCCcceeEEeeeeeEEEecCc--------- Confidence 999999874 5555543 68999999997 899999999986554 566789999999988753211 Q ss_pred cccCcCccCcceEEecCCeEEcccccccEEEecccCceeEeeeEEEEEEEEeeEEecCCCceeeEecceeeeeeeeeeee Q lcl|Aclame:pro 584 GSGEWDYLAEYTISVSGGAYFTSSDVGAQLQFPYTGADPDTGYEVSKELRCDIISVTSNTAVVVRANRNVPPSLRNVATT 663 (823) Q Consensus 584 ~~~~l~~~~~~~v~~~dg~~~~~~~vgg~i~l~~~~~~~~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 663 (823) .+..+.. .+ T Consensus 602 ------------------~~~~~~~----~t------------------------------------------------- 610 (785) T protein:vir:94 602 ------------------SFNADTY----KT------------------------------------------------- 610 (785) T ss_pred ------------------ceecccc----cc------------------------------------------------- Confidence 1000000 00 Q ss_pred cccccceeeecccccccceEEEEeCCceeCCEEEcCCEEEe--c--CCCcEEEECcccceEEEEcceecCCC-C----c- Q lcl|Aclame:pro 664 NWQMARRTFGGLSHLEGQTVNILSDANVEPQKVVSGGAVTL--E--SPGAVVHIGLPITAEFETLDININGQ-E----T- 733 (823) Q Consensus 664 ~~g~~~~~~~gl~~l~g~~v~v~~dg~~~~~~~v~~g~itl--~--~~~~~~~~gl~~~~~~~~l~~~~~~~-~----~- 733 (823) .......+.+|.||||++|.|++||.+++...|.++.++| + .++++|||||+|+++++++||++..+ | + T Consensus 611 -~~~~~~~~~g~~~leg~~v~v~adG~~~~~~~v~~~~~tl~~~g~~~~~~v~vGl~y~~~~~~~~~~~~~~~~~~~~~~ 689 (785) T protein:vir:94 611 -TVDIGAAYGGNAPSPGRYYLIDSQGAYLDLGELTSISTVITLNGDWSGRTVFIGRSYLMSYKFSRFLIKIEDDSGTQSE 689 (785) T ss_pred -ccccccccccCCccCCeEEEEeeCCcCccCceEcCCCcEEEecCCCCCceEEEeeeeeEEEeecceeEEecCCCccccc Confidence 0112233578999999999999999999999997765444 4 67999999999999999999987532 1 1 Q ss_pred ccccceeEeeEEEEEEccccEEEecCC---CceeEeeccCC-CcCCCCCCcccceEEEEecCCcCCccEEEEEEcCCCCE Q lcl|Aclame:pro 734 LLDKKQVIPSVTLVVNASRGIWATTPG---GKWYEYPQREF-EFYDDPVDDATGKVEVKLDSNWGKNGRVKIRQLDPLPL 809 (823) Q Consensus 734 ~~~~~~~i~~~~~~~~~s~~~~~~~~~---~~~~~~~~~~~-~~~~~~~~~~tg~~~~~~~~~~~~~~~~~i~q~~P~P~ 809 (823) ..|| .||+++++++.+|.++.++... +..+.++.++. ++.-..|+++||++++.+. ||+++.+|+|+|++|||| T Consensus 690 ~~gr-~~l~r~~~~~~~sg~~~v~v~~~~~~~~~~~~~~~~g~~~~~~~~~~tg~~~vp~~-g~~~~~~v~i~~~~P~P~ 767 (785) T protein:vir:94 690 DTGR-LQLRRAWVNYRDTGALRLIVRNGEREFVNTFNGYTLGQQTIGTTNIGDGQYRFAMN-GNALTTSLTLESDYPTPV 767 (785) T ss_pred cccc-EEEEEEEEEeecccceEEEecCCCccceeeecCcccCcccccccccccceEEEEee-cccceEEEEEEECCCCce Confidence 1355 6899999999999999997543 33455655544 3444456899999999985 799999999999999999 Q ss_pred EEEEEEEEEEecCC Q lcl|Aclame:pro 810 SVLAVIPRLTVGGF 823 (823) Q Consensus 810 tvla~~~~~~~~g~ 823 (823) +||||..|...|=. T Consensus 768 tvlsi~~eg~y~~r 781 (785) T protein:vir:94 768 SIVGCGWEASYAKK 781 (785) T ss_pred EEEEEEEEEEEecc Confidence 99999999999988 No 10 >protein:vir:94583 Length: 792 # NCBI annotation: Tubular tail protein B # Family: family:all:825 # MgeID: mge:1516 # MgeName: Berlin # Cross-refs: genbank:acc:YP_919014;genbank:gi:119637778;genbank:GeneID:5179343 Probab=100.00 E-value=9.1e-164 Score=914.42 Aligned_cols=714 Identities=14% Similarity=0.139 Sum_probs=531.6 Q ss_pred Cc-eeeeecccccccccccccccchHHHHHHHHhhhhcceeeecCCceecCcceeeeeecCC---CCCceEEEEEECCCC Q lcl|Aclame:pro 1 MA-ISWIQPSFAGGEIGPSLYGRIDMAKYQVALRKCDNFIVRQYGGVENRPGTRFVGAAKYP---NRKCRLIPFQFSTVQ 76 (823) Q Consensus 1 M~-~~~~q~sF~~GElsP~l~~r~Dl~ry~~q~~~~~N~~~~~~GGl~rRPGt~fva~~~~~---~~~~rLipF~~~~~~ 76 (823) |+ +++.++||++| +++|+|++||++||++|+||+++|+|||+||||++||+.+++. ++.++|+||+|+++| T Consensus 1 M~~i~~s~~n~~~G-----iSqq~D~~ry~~q~~~~~N~~~~~~gG~~rRpG~~fv~~l~~~~~~~~~~~l~~~~~~~~q 75 (792) T protein:vir:94 1 MALISQSVKNLKGG-----ISQQPNILRFPEQGSEQINGWSSETEGLQKRPPFVFTKTIGDQNALGAKPLVHLINRDSAE 75 (792) T ss_pred Ccceeeecchhhcc-----eecCcchHHhhhhhhhhhcceeeeccccccCChhHHHHhhhcCCCCCcccEEEEEEeCCCc Confidence 99 68999999999 8999999999999999999999999999999999999988754 567899999999999 Q ss_pred eEEEEEeCCeEEEEECCceE-eeccccceEEeccccccc--cceeEEEEeCcEEEEEeCCceEEEEEEcCCCCceeee-E Q lcl|Aclame:pro 77 TYALEFGHQYMRVIKDGALV-LNSSNVIYEIATPYTEAD--LFRIKFTQSADVLTLVHPAYPPKELRRYAHDNWQLVD-V 152 (823) Q Consensus 77 ~Y~l~fg~~~irV~~~~g~v-~~t~~~~~~~~tPyt~~~--l~~L~~~qsaD~~fIvn~~~~p~~l~r~~~~~ws~~~-~ 152 (823) +|+|+|++++||||+.+|.. +.+. .+||..+. ..+|+++|+||++||+|++++|+++.|.++..|.... + T Consensus 76 ~y~l~f~~~~~rv~~~~g~~~~~~~------~~~y~~~~~~~~~l~~~q~aD~~fi~n~~~~~~~~~~~~~~~~~~~~~~ 149 (792) T protein:vir:94 76 QYYVVFTGQGVRVFDLNGKEYDVKG------DLSYVKVENPRDDLRMVTVADYTFIVNRNMVVRPDTTPLYTLKENGDCL 149 (792) T ss_pred eEEEEEcCCeEEEEecCCceEEecc------cCceeeecCCcceeEEEEEcCEEEEEeCCccceeEecCcCCCCCCceEE Confidence 99999999999999987753 3333 34553333 4679999999999999999999999999988776432 2 Q ss_pred EE-ecccccc---ccccc-eEE-EEecccCCceeeeccccccccccccceEEEcccccceecceeeeeeeeeeee----- Q lcl|Aclame:pro 153 VT-KNGPFED---INIDE-SLT-VYASASTGTITLTASASIFGAEQVGKLFYLEQPAVDSVPVWETSKSTSIGDI----- 221 (823) Q Consensus 153 ~f-~~~p~~~---i~~~~-s~t-~t~~a~t~~~Tvtas~~~~~a~~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 221 (823) .+ ..+++.. +..+. ..+ .++.+.....+.. ..++.++..+............|..........+ T Consensus 150 v~i~~g~y~~~y~i~i~~~~~~~~~~~~t~~~~~~~-----~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 224 (792) T protein:vir:94 150 INIRGGMYGRTLAFTINNTKIAYEIAHGDAPEHSKQ-----TDAQWLVKKLAGLARLNVAFKGWTFTEGPGYIHVIAPSN 224 (792) T ss_pred EEccCCCcceeEEEEecCceeeeeeecCcccceecc-----cchhhhhhhhhhhccccccccccEEEECCeEEEEEecCC Confidence 33 2333321 11111 111 1111111111111 1122222222222222111122211100000000 Q ss_pred ------EEe---ccceeeeEe-ccc-ceeecccccCceEEEEeceeccccceEEEEEEecCccEEEEEEecCccccccEE Q lcl|Aclame:pro 222 ------RRA---DSNYYRAVT-AGK-TGTLRPSHTEGTSWDGWGGSGDDDTGIEWEYLHSGFGIARITAVNGTTATAEVI 290 (823) Q Consensus 222 ------~~~---~~~~~~~~~-~~~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~~~~~~~~~~ 290 (823) ... ++....... ..+ ...+...+..+. ...+.+.........|..+....|.|++++.++.... ... T Consensus 225 ~~~~~~~~~~g~~~~~~~~~~~~v~~~~~lp~~~~~G~-~v~i~~~~~~~~d~y~v~~~~~~~~w~E~~~~~~~~~-~~~ 302 (792) T protein:vir:94 225 SQINSLSTEDGYADQLMNAVMHTSQSFSRLPVEAPNGY-TVKIVGDTSKTSDMFYVQYDNMKKVWKEVAGWGVQKG-LNG 302 (792) T ss_pred ceeeeeecccCcCcceeeeeeecccccccccccCCCCc-EEEEEccCCCCccceEEEEEcCCceEEEecccceeee-ecc Confidence 000 111111111 111 112222222332 2222333333344455556677899999987765433 234 Q ss_pred EEeeccccccccCcceecccCccc-------CCCCccE-------EEEEeceEEEEeCcCCCcEEEEEcccCcccccccc Q lcl|Aclame:pro 291 SYIPSQVVGEDNASYKWAKYAWNS-------VNGYPGT-------VVYYQQRLYFAASTAFPQTIWASRTGDYKDFGKSN 356 (823) Q Consensus 291 ~~~~~~~~~~~~~t~~~~~~~w~~-------~~g~Ps~-------v~f~q~RL~f~~~~~~p~~V~~Sr~gdy~nF~~~t 356 (823) .+||+.+++...++|.++...|.+ +|++|+| |+||||||+|++ |++|||||+|||+||++++ T Consensus 303 ~tmp~~lv~~~~~~~~~~~~~w~~r~~gd~~tnp~psf~g~~i~~v~f~q~RL~f~~----~~~v~~Srtgd~~nF~~~t 378 (792) T protein:vir:94 303 GTMPHALVRQADGSFQMQVLPWTQRTCGDMDTNPTPSIVDQKINDVFFFRNRLGFLA----GENIVMSRTSKYFSLFPAS 378 (792) T ss_pred cccCeeEEEcCCCcEEEEeccccccccCccccCccceeccCCcceEEEEcceEEEec----CCeEEEEccCCcccCcccc Confidence 569999999999999988887854 5888876 799999999997 5689999999999999998 Q ss_pred c--CCCCCcEEEEEcCCCceEEEEEeecC-cEEEEecCcEEEEecCCCccccccceEEEEeecccCc-ccccEEeCCeEE Q lcl|Aclame:pro 357 P--TQDDDRIIYTYAGRQVNEIRHLIDVG-SLVALTSGGEYVITGDQNKVLTPSSFAFSSQGSNGSS-NVPPIAVANIAL 432 (823) Q Consensus 357 ~--~~DdD~I~~~~~~~~~~~i~~~v~~~-~Ll~~t~~~q~~l~~~~~~~lTP~~~~i~~~s~~g~~-~~~Pv~vg~~v~ 432 (823) + ++|||||+++++++++++|+|+++++ +|+|||+++||+|+++ ++|||+|++++++|+|+|+ .++|+.+|++++ T Consensus 379 ~~~~~DdD~I~~~~ss~~~~~i~~~v~~~~~L~l~T~~~q~~l~~~--~~lTP~~~~i~~~s~~~~~~~~~Pv~vG~~v~ 456 (792) T protein:vir:94 379 VANLSDDDPIDVAVSHNRISILKYAVPFSEELLLWSDQAQFVLSAQ--GILSPKSVELNLTTEFDVSDRARPFGVGRGVY 456 (792) T ss_pred ccCCCCCccEEEEecCCcceeeeEEeecCCcEEEEecCcEEEEeCC--CcccceeEEEEEEEEeeccCCCCceEeCCeEE Confidence 5 46999999999999999999999996 7999999999999974 6999999999999999875 699999999999 Q ss_pred EEecCCCE--E-EEEEeeccccceeecchHHHHHHhcCCCceEEEEEcCCCcEEEEEEeCCCeEEEEEEe---cccccee Q lcl|Aclame:pro 433 FVQEKGSV--V-RDLAYSFDVDGYQGNDLTILANHLFQKHSIVDWCFSIVPYSSAFCIRDDGKLLVMTYL---RDQQVFA 506 (823) Q Consensus 433 f~~~~g~~--v-~e~~~~~~~d~~~~~dlt~~~~hl~~~~~~~~~a~~~~p~~~~~~~~~dg~l~~~ty~---~~q~v~a 506 (823) |++++|++ + |+|.|++.+|+|++.|||+|++|||++..+..++++++|++++|+++++|+|++|+|+ +||+|+| T Consensus 457 Fv~~~g~~~~v~r~~~~~~~~d~y~a~DlT~~~~hl~~~~v~~~~a~~~~~~~vv~~~~~~g~l~~~ty~~~~~e~~v~a 536 (792) T protein:vir:94 457 FASPRASYTSLNRYYAVQDVSSVKSAEDMSAHVPNYIPNGVFSIRGSSTENFISVLSSNAPSRIFLYKFLYLNEEIAQQS 536 (792) T ss_pred EeecCCCeeEEEeeeeeccccCceehhhHHHHHHHhcCCceEEEEEeCCCCcEEEEEEcCCCeEEEEEEeecCCceEEEe Confidence 99999974 4 4578899999999999999999999998888999999999999999999999999997 8889999 Q ss_pred EEeeccCCceEEEEEEecCCCCEEEEEEEecCCCcEEEEEEeeccccCCcccceeEeeeeeEEeccccceeeeEeecccc Q lcl|Aclame:pro 507 WAPQSSTGKYESTCSISEGNEDAVYFVVNRTVNGQTVRYIERLSSRLFTSDEDAFFVDSGLSYDGRNTSDRTMTITGGSG 586 (823) Q Consensus 507 W~~w~~~g~~~~~~~~~~~~~d~l~~~v~r~~~g~~~~~~e~~~~~~~~~~~~~~~lD~~~~y~~~~~~~~~~~~~~~~~ 586 (823) ||||+|+|.++++|+ ++.+|+||++|+|++++...|+.|+++...++...+++||||+++|.....+. T Consensus 537 W~~~~~~g~~~~~~~--~~~~D~l~~~v~r~~~~~~~r~~~~~~~~d~~~~~~~~~lD~~~~~~~~~~~~---------- 604 (792) T protein:vir:94 537 WSHWELGSNVTVLAC--DSIGSTMYLVLRNQSHTWMCRAHFTKNSIDFPDEPYRLYIDNKVKYVIPEGSY---------- 604 (792) T ss_pred EEEEEcCCcEEEEEE--eecCCEEEEEEEeCCCEEEEEEEEeecccccCCCcceeeeeeeeeEEecCcce---------- Confidence 999999999999886 45579999999999998888888888888888888999999999885321100 Q ss_pred CcCccCcceEEecCCeEEcccccccEEEecccCceeEeeeEEEEEEEEeeEEecCCCceeeEecceeeeeeeeeeeeccc Q lcl|Aclame:pro 587 EWDYLAEYTISVSGGAYFTSSDVGAQLQFPYTGADPDTGYEVSKELRCDIISVTSNTAVVVRANRNVPPSLRNVATTNWQ 666 (823) Q Consensus 587 ~l~~~~~~~v~~~dg~~~~~~~vgg~i~l~~~~~~~~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~g 666 (823) .++ +.++ . T Consensus 605 -----------~~~----------~~~T---------------------------------------------------~ 612 (792) T protein:vir:94 605 -----------NDD----------TYAT---------------------------------------------------T 612 (792) T ss_pred -----------ecC----------ceee---------------------------------------------------e Confidence 000 0000 0 Q ss_pred ccceeeecccccccceEEEEeCCcee----CC--EEEcCCEEEec--CCCcEEEECcccceEEEEcceecCCC-Cccccc Q lcl|Aclame:pro 667 MARRTFGGLSHLEGQTVNILSDANVE----PQ--KVVSGGAVTLE--SPGAVVHIGLPITAEFETLDININGQ-ETLLDK 737 (823) Q Consensus 667 ~~~~~~~gl~~l~g~~v~v~~dg~~~----~~--~~v~~g~itl~--~~~~~~~~gl~~~~~~~~l~~~~~~~-~~~~~~ 737 (823) .......||+||||+.|.+++||..+ +. .++.+|.++|+ .+++++||||+|+++++++|+++..+ |..+.+ T Consensus 613 ~~~~~~~gl~~l~G~~v~v~~dG~~~~~~~~~~~~~~~~~~i~~~g~~~a~~v~VGl~y~~~~~~~~~~~~~~~g~~~~~ 692 (792) T protein:vir:94 613 VKPVDVYGMKYWTGKFYIVASDGLVSWFEPPRGGWPNGVPMLTMSGNREGETIYVGLAISFRYVFSKFLIKKTADDGSIA 692 (792) T ss_pred eccccccCcccccCcEEEEEecCceeEeecccceecCCccEEEecCCccCCeEEEeeeeeEEEEeccceeeccCCCcCcc Confidence 01123568999999999999999764 23 33456888887 67999999999999999999988543 332222 Q ss_pred -----ceeEeeEEEEEEccccEEEecCCC---ceeEee-ccC--CCcCCCCCCcccceEEEEecCCcCCccEEEEEEcCC Q lcl|Aclame:pro 738 -----KQVIPSVTLVVNASRGIWATTPGG---KWYEYP-QRE--FEFYDDPVDDATGKVEVKLDSNWGKNGRVKIRQLDP 806 (823) Q Consensus 738 -----~~~i~~~~~~~~~s~~~~~~~~~~---~~~~~~-~~~--~~~~~~~~~~~tg~~~~~~~~~~~~~~~~~i~q~~P 806 (823) ++||+++++++.+|..+.++..+. .+.++. .|- .+....+|+++||++++.+ .||+++.+|+|+|++| T Consensus 693 ~~~~gr~rl~r~~~~~~~tg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~tg~~~vp~-~g~~~~~~v~i~~d~P 771 (792) T protein:vir:94 693 TEDIGRLQLRRAWVNYEDSGAFTVEVENTSRLFSYDMAGARLGSNVLRAGGLNVGTGQFRFPV-TGNAQLNEVRIISEHT 771 (792) T ss_pred ccceeeEEEEEEEEeeeccceeEEEEcCCCcceeeeeccceeccccccccccccccceEEEEe-eccCceEEEEEEECCC Confidence 479999999999999998875433 222222 221 2234566788999999998 5799999999999999 Q ss_pred CCEEEEEEEEEEEecCC Q lcl|Aclame:pro 807 LPLSVLAVIPRLTVGGF 823 (823) Q Consensus 807 ~P~tvla~~~~~~~~g~ 823 (823) |||+||||..|...|=. T Consensus 772 ~P~tvlai~~eg~y~~r 788 (792) T protein:vir:94 772 TPLNVIGCGWEGNYLRR 788 (792) T ss_pred CCEEEEEEEEEEEEecc Confidence 99999999999999887 No 11 >protein:vir:2203 Length: 794 # NCBI annotation: tail tubular protein B # Family: family:all:825 # MgeID: mge:49 # MgeName: T7 # Cross-refs: genbank:acc:NP_042000;swissprot:sw:p03747;genbank:gi:9627472;uniprot:P03747;genbank:GeneID:1261024 Probab=100.00 E-value=1.3e-161 Score=902.56 Aligned_cols=718 Identities=14% Similarity=0.146 Sum_probs=526.0 Q ss_pred Cc-eeeeecccccccccccccccchHHHHHHHHhhhhcceeeecCCceecCcceeeeeecCCC---CCceEEEEEECCCC Q lcl|Aclame:pro 1 MA-ISWIQPSFAGGEIGPSLYGRIDMAKYQVALRKCDNFIVRQYGGVENRPGTRFVGAAKYPN---RKCRLIPFQFSTVQ 76 (823) Q Consensus 1 M~-~~~~q~sF~~GElsP~l~~r~Dl~ry~~q~~~~~N~~~~~~GGl~rRPGt~fva~~~~~~---~~~rLipF~~~~~~ 76 (823) |+ +++.++||++| +++|+|++||++||++|+||+++|+|||+||||++||+++++.. +..+|++|+|++.| T Consensus 1 M~~i~~s~~n~~~G-----vSqq~D~~ry~~q~~~~~N~~~~~~gG~~rRpG~~fv~~l~~~~~~~~~~~l~~~~~~~~~ 75 (794) T protein:vir:22 1 MALISQSIKNLKGG-----ISQQPDILRYPDQGSRQVNGWSSETEGLQKRPPLVFLNTLGDNGALGQAPYIHLINRDEHE 75 (794) T ss_pred Cceeeeecchhhcc-----cccCCchHHhhhHHhhhhcceeeccCCceeCCchHhhhhhcccCCCCCccEEEEEEeCCCc Confidence 99 68999999999 88999999999999999999999999999999999999987532 34566677899999 Q ss_pred eEEEEEeCCeEEEEECCceEeeccccceEEeccc--cccccceeEEEEeCcEEEEEeCCceEEEEEEcCCCCcee---ee Q lcl|Aclame:pro 77 TYALEFGHQYMRVIKDGALVLNSSNVIYEIATPY--TEADLFRIKFTQSADVLTLVHPAYPPKELRRYAHDNWQL---VD 151 (823) Q Consensus 77 ~Y~l~fg~~~irV~~~~g~v~~t~~~~~~~~tPy--t~~~l~~L~~~qsaD~~fIvn~~~~p~~l~r~~~~~ws~---~~ 151 (823) +|+|+|++++||||+.+|.... .. ++..+|| ++.++.+|+++|+||++||+|++++|+++.|.++++|-. .. T Consensus 76 ~y~l~~~~~~irv~~~~G~~~~-v~--~~~~~~y~~~~~~~~~l~~~q~aD~~fi~~~~~~p~~~~~~~~~~~~~~~~~g 152 (794) T protein:vir:22 76 QYYAVFTGSGIRVFDLSGNEKQ-VR--YPNGSNYIKTANPRNDLRMVTVADYTFIVNRNVVAQKNTKSVNLPNYNPNQDG 152 (794) T ss_pred EEEEEEcCCeEEEEecCCcEEE-ee--cCCCccceecCCCcccEEEEEEcCEEEEEcCCeeeeEeeccccCCCCCCCceE Confidence 9999999999999999885432 11 1223444 455678899999999999999999999999999887722 12 Q ss_pred EEEeccccc------cccccceEEEEecccCCceeee-ccccccccc--------cccceEEEcccccceecceeeeeee Q lcl|Aclame:pro 152 VVTKNGPFE------DINIDESLTVYASASTGTITLT-ASASIFGAE--------QVGKLFYLEQPAVDSVPVWETSKST 216 (823) Q Consensus 152 ~~f~~~p~~------~i~~~~s~t~t~~a~t~~~Tvt-as~~~~~a~--------~vg~~~~~~~~~~~~~~~~~~~~~~ 216 (823) +.+..+..+ .++.....+.+..+.+...... .+......+ ..+..+.............. . T Consensus 153 ~v~v~~g~y~~ty~v~I~~~~~a~~~~p~gt~~~~~~~~~~~~ia~~L~~~l~~~~~~~t~~~~~~~~~i~a~~~----~ 228 (794) T protein:vir:22 153 LINVRGGQYGRELIVHINGKDVAKYKIPDGSQPEHVNNTDAQWLAEELAKQMRTNLSDWTVNVGQGFIHVTAPSG----Q 228 (794) T ss_pred EEEccCCccceeEEEEeccCcceEEEEcCCCccccceeechhhhhhhhhhhheeccccceEEeCCceEEEEEcCC----c Confidence 333333222 1222222223322222222111 111111000 11111111111000000000 0 Q ss_pred eeeeeEE---eccceeee-Eeccc-ceeecccccCceEEEEeceeccccceEEEEEEecCccEEEEEEecCccccccEEE Q lcl|Aclame:pro 217 SIGDIRR---ADSNYYRA-VTAGK-TGTLRPSHTEGTSWDGWGGSGDDDTGIEWEYLHSGFGIARITAVNGTTATAEVIS 291 (823) Q Consensus 217 ~~~~~~~---~~~~~~~~-~~~~~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~~~~~~~~~~~ 291 (823) .+..... .++..... ....+ ..++...+..+..+ .+.+.........+..+....|.|++++.++... +.... T Consensus 229 ~~~~~t~~~g~~~t~~~~~~~~~~~~~~lp~~~~~G~~v-~i~~~~~~~~~~Y~v~~~~~~~~w~e~~~~~~~~-~~~~~ 306 (794) T protein:vir:22 229 QIDSFTTKDGYADQLINPVTHYAQSFSKLPPNAPNGYMV-KIVGDASKSADQYYVRYDAERKVWTETLGWNTED-QVLWE 306 (794) T ss_pred eEEEEeeecccCcceeEEEEeccccceeccccCCCCeEE-EEEeCCCCCcceeEEEEeccceEEEEeeecccee-eeccc Confidence 0000000 11111111 11111 22334444444333 3333333333333444566778999998776543 44457 Q ss_pred EeeccccccccCcceecccCc-----cc--CCCCccE-------EEEEeceEEEEeCcCCCcEEEEEcccCcccccccc- Q lcl|Aclame:pro 292 YIPSQVVGEDNASYKWAKYAW-----NS--VNGYPGT-------VVYYQQRLYFAASTAFPQTIWASRTGDYKDFGKSN- 356 (823) Q Consensus 292 ~~~~~~~~~~~~t~~~~~~~w-----~~--~~g~Ps~-------v~f~q~RL~f~~~~~~p~~V~~Sr~gdy~nF~~~t- 356 (823) +||+.++....+++.+....| ++ +||+|+| |+||||||+|++ |++|||||+||||||++++ T Consensus 307 t~p~~lv~~~~~~~~~~~~~w~~r~~Gd~~tnp~psf~g~~i~~v~f~q~RL~f~~----~~~v~~Srtgd~~nF~~~t~ 382 (794) T protein:vir:22 307 TMPHALVRAADGNFDFKWLEWSPKSCGDVDTNPWPSFVGSSINDVFFFRNRLGFLS----GENIILSRTAKYFNFYPASI 382 (794) T ss_pred ceeeEeeeccCCcEEEeeccccccccCccccCCcceecCCCcceEEEEcceEEEec----CCeEEEEccCCccccccccC Confidence 799999999998986555555 33 5777765 889999999997 4679999999999999998 Q ss_pred -cCCCCCcEEEEEcCCCceEEEEEeecC-cEEEEecCcEEEEecCCCccccccceEEEEeecccCc-ccccEEeCCeEEE Q lcl|Aclame:pro 357 -PTQDDDRIIYTYAGRQVNEIRHLIDVG-SLVALTSGGEYVITGDQNKVLTPSSFAFSSQGSNGSS-NVPPIAVANIALF 433 (823) Q Consensus 357 -~~~DdD~I~~~~~~~~~~~i~~~v~~~-~Ll~~t~~~q~~l~~~~~~~lTP~~~~i~~~s~~g~~-~~~Pv~vg~~v~f 433 (823) +++|||||+++++++++++|+|+++++ +|+|||+++||+|+++ ++|||+|++++++|+|+|+ .++|+.+|+++|| T Consensus 383 ~~~~DdD~i~~~~ss~~~~~i~~~v~~~~~L~i~t~~~e~~l~~~--~~lTP~~~~~~~~s~~~~~~~~~Pv~vg~~v~f 460 (794) T protein:vir:22 383 ANLSDDDPIDVAVSTNRIAILKYAVPFSEELLIWSDEAQFVLTAS--GTLTSKSVELNLTTQFDVQDRARPFGIGRNVYF 460 (794) T ss_pred cCCCCCccEEEEecCCcceeeEEEeecCCcEEEEecCcEEEEeCC--CcccceeEEEEEEEEeeccCCCCceEeCCeEEE Confidence 467999999999999999999999985 7999999999999864 5999999999999999875 6999999999999 Q ss_pred EecCCCE---EEEEEeeccccceeecchHHHHHHhcCCCceEEEEEcCCCcEEEEEEeCCCeEEEEEEe---ccccceeE Q lcl|Aclame:pro 434 VQEKGSV---VRDLAYSFDVDGYQGNDLTILANHLFQKHSIVDWCFSIVPYSSAFCIRDDGKLLVMTYL---RDQQVFAW 507 (823) Q Consensus 434 ~~~~g~~---v~e~~~~~~~d~~~~~dlt~~~~hl~~~~~~~~~a~~~~p~~~~~~~~~dg~l~~~ty~---~~q~v~aW 507 (823) ++++|++ +|++.|++.+|+|++.|||+|++||+++..+..++++++|..++|+++++|+|++|+|+ +||+|+|| T Consensus 461 ~~~~g~~~~~~r~~~~~~~~d~y~~~Dlt~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~y~~~~~e~~v~aW 540 (794) T protein:vir:22 461 ASPRSSFTSIHRYYAVQDVSSVKNAEDITSHVPNYIPNGVFSICGSGTENFCSVLSHGDPSKIFMYKFLYLNEELRQQSW 540 (794) T ss_pred EecCCCeeEEEEeEeeecccCceehhhHHHHHHHhcCCceEEEEEeCCCCcEEEEEEcCCCEEEEEEEeecCCceeEEee Confidence 9999964 46688899999999999999999999998888899999999999999999999999997 88889999 Q ss_pred EeeccCCceEEEEEEecCCCCEEEEEEEecCCCcEEEEEEeeccccCCcccceeEeeeeeEEeccccceeeeEeeccccC Q lcl|Aclame:pro 508 APQSSTGKYESTCSISEGNEDAVYFVVNRTVNGQTVRYIERLSSRLFTSDEDAFFVDSGLSYDGRNTSDRTMTITGGSGE 587 (823) Q Consensus 508 ~~w~~~g~~~~~~~~~~~~~d~l~~~v~r~~~g~~~~~~e~~~~~~~~~~~~~~~lD~~~~y~~~~~~~~~~~~~~~~~~ 587 (823) |||+|+|.++++|+.. .+|+||++|+|++++...|+.|+|+...+....+++||||+++|... T Consensus 541 ~~~~~~g~~~~~~~~~--~~d~l~~iv~r~~~~~~~r~~~~~~~~~~~~~~~~~~lD~~~~~~~~--------------- 603 (794) T protein:vir:22 541 SHWDFGENVQVLACQS--ISSDMYVILRNEFNTFLARISFTKNAIDLQGEPYRAFMDMKIRYTIP--------------- 603 (794) T ss_pred EEEEcCCCEEEEEEEe--cCCEEEEEEEeCCCEEEEEEEEeeccccCCCccceeeeeeeEEEeec--------------- Confidence 9999999999999865 57999999999999999999999998888888999999999877311 Q ss_pred cCccCcceEEecCCeEEcccccccEEEecccCceeEeeeEEEEEEEEeeEEecCCCceeeEecceeeeeeeeeeeecccc Q lcl|Aclame:pro 588 WDYLAEYTISVSGGAYFTSSDVGAQLQFPYTGADPDTGYEVSKELRCDIISVTSNTAVVVRANRNVPPSLRNVATTNWQM 667 (823) Q Consensus 588 l~~~~~~~v~~~dg~~~~~~~vgg~i~l~~~~~~~~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~g~ 667 (823) +|.+..... -..+. T Consensus 604 ------------~g~~~~~~~-~t~~~----------------------------------------------------- 617 (794) T protein:vir:22 604 ------------SGTYNDDTF-TTSIH----------------------------------------------------- 617 (794) T ss_pred ------------cceeecCCc-ceEEE----------------------------------------------------- Confidence 111100000 00000 Q ss_pred cceeeecccccccceEEEEeCCceeCCEEEcCC-----EEEe--cCCCcEEEECcccceEEEEcceecCCC-Cccccc-- Q lcl|Aclame:pro 668 ARRTFGGLSHLEGQTVNILSDANVEPQKVVSGG-----AVTL--ESPGAVVHIGLPITAEFETLDININGQ-ETLLDK-- 737 (823) Q Consensus 668 ~~~~~~gl~~l~g~~v~v~~dg~~~~~~~v~~g-----~itl--~~~~~~~~~gl~~~~~~~~l~~~~~~~-~~~~~~-- 737 (823) .....|++|+||++|.+++||.++....+++| .+++ +.++++|||||+|++++++|||++..+ |..+++ T Consensus 618 -~~~~~g~~~~~g~~v~~~~dg~~~~~~~~~~~~~~~~~~~v~~~~~~~~v~VGl~y~s~~~~~~~~~~~~~~~~~~~~~ 696 (794) T protein:vir:22 618 -IPTIYGANFGRGKITVLEPDGKITVFEQPTAGWNSDPWLRLSGNLEGRMVYIGFNINFVYEFSKFLIKQTADDGSTSTE 696 (794) T ss_pred -cccccCcccccceEEEEEcCCceeeceeeeeeeeccceEEeCCCCCCcEEEEeeeeeEEEEecceEEEecCCCccceee Confidence 11125788999999999999999888777655 3444 568999999999999999999998643 333322 Q ss_pred ---ceeEeeEEEEEEccccEEEecCCC-ceeEeec--cCC---CcCCCCCCcccceEEEEecCCcCCccEEEEEEcCCCC Q lcl|Aclame:pro 738 ---KQVIPSVTLVVNASRGIWATTPGG-KWYEYPQ--REF---EFYDDPVDDATGKVEVKLDSNWGKNGRVKIRQLDPLP 808 (823) Q Consensus 738 ---~~~i~~~~~~~~~s~~~~~~~~~~-~~~~~~~--~~~---~~~~~~~~~~tg~~~~~~~~~~~~~~~~~i~q~~P~P 808 (823) +.||+++++++.+|.++.+...+. ....+.+ +.. +.....+++.+|.+++.. .+|+++++|+|+|++||| T Consensus 697 ~~grl~l~r~~~~~~~tg~~~v~v~~~~~~~~~~~~~~~~g~~~~~~g~~~~~tg~~~vp~-~~~~~~~~v~i~~d~p~P 775 (794) T protein:vir:22 697 DIGRLQLRRAWVNYENSGTFDIYVENQSSNWKYTMAGARLGSNTLRAGRLNLGTGQYRFPV-VGNAKFNTVYILSDETTP 775 (794) T ss_pred ecceEEEEEEEEEeccccceEEEEcCCCcccceeecCceecccccccCcccccCceEEEEe-cccCceEEEEEEECCCCC Confidence 479999999999999999875332 2222221 111 112233678899999987 679999999999999999 Q ss_pred EEEEEEEEEEEecCC Q lcl|Aclame:pro 809 LSVLAVIPRLTVGGF 823 (823) Q Consensus 809 ~tvla~~~~~~~~g~ 823 (823) |+||||..|...|=. T Consensus 776 ~tvlsi~~eg~y~~r 790 (794) T protein:vir:22 776 LNIIGCGWEGNYLRR 790 (794) T ss_pred EEEEEEeEEEEEecc Confidence 999999999999888 No 12 >protein:vir:10452 Length: 794 # NCBI annotation: tail protein # Family: family:all:825 # MgeID: mge:184 # MgeName: phiA1122 # Cross-refs: genbank:acc:NP_848299;genbank:gi:30387490;genbank:GeneID:1733952 Probab=100.00 E-value=2.7e-160 Score=895.36 Aligned_cols=714 Identities=15% Similarity=0.138 Sum_probs=531.2 Q ss_pred Cc-eeeeecccccccccccccccchHHHHHHHHhhhhcceeeecCCceecCcceeeeeecCCC--CCceEEEEE-ECCCC Q lcl|Aclame:pro 1 MA-ISWIQPSFAGGEIGPSLYGRIDMAKYQVALRKCDNFIVRQYGGVENRPGTRFVGAAKYPN--RKCRLIPFQ-FSTVQ 76 (823) Q Consensus 1 M~-~~~~q~sF~~GElsP~l~~r~Dl~ry~~q~~~~~N~~~~~~GGl~rRPGt~fva~~~~~~--~~~rLipF~-~~~~~ 76 (823) |+ +.+.++||++| +++|+|++||++||++|+||+|+|+|||+||||++||+++++++ ....+++|. +++.| T Consensus 1 M~~i~~s~~n~~~G-----vSqq~D~~Ry~~q~~~~~N~~~~~~gG~~rRpGt~fv~~l~~~~~~~~~~~~~~~~rd~~e 75 (794) T protein:vir:10 1 MALISQSIKNLKGG-----ISQQPDILRYPDQGSRQVNGWSSETEGLQKRPPLVFLKTLGDNGALGQAPYIHLINRDENE 75 (794) T ss_pred Ccceeeecchhhcc-----cccCCchHHhhhhHhhhhcceeeeccCcccCcchhhheeccCCCccccceeeeEEecCCCc Confidence 99 68999999999 99999999999999999999999999999999999999998654 456667764 67889 Q ss_pred eEEEEEeCCeEEEEECCceEeeccccceEEeccc--cccccceeEEEEeCcEEEEEeCCceEEEEEEcCC----CCceee Q lcl|Aclame:pro 77 TYALEFGHQYMRVIKDGALVLNSSNVIYEIATPY--TEADLFRIKFTQSADVLTLVHPAYPPKELRRYAH----DNWQLV 150 (823) Q Consensus 77 ~Y~l~fg~~~irV~~~~g~v~~t~~~~~~~~tPy--t~~~l~~L~~~qsaD~~fIvn~~~~p~~l~r~~~----~~ws~~ 150 (823) +|+|+|++++||||+.+|.... +.++..+|| ++.++.+|+++|+||++||+|++++|++..+... ..|... T Consensus 76 ~~~v~~~~~~irv~~~~G~~~~---v~~~~~~~Y~~aa~~~~~l~~~q~aD~~fivn~~~~~~~~~~~~~~~~~~~~~~~ 152 (794) T protein:vir:10 76 QYYAVFTGTGIRVFDLAGNEKQ---VRYPNGSNYIKTANPRSDLRMVTVADYTFIVNRNVVVQKDPNSVNLANYNPKQDG 152 (794) T ss_pred eEEEEEeCCeEEEEEcCCcEEE---EEcCCCCcceecCCCcceEEEEEEcCEEEEEcCCeeeeeeccccccCCCCCCccE Confidence 9999999999999998873211 122344566 3446788999999999999999999998665432 233332 Q ss_pred eEEEeccccc-----cccccceEEEEe-cccCCceeeeccc---------------cccccccccceEEEcccccceecc Q lcl|Aclame:pro 151 DVVTKNGPFE-----DINIDESLTVYA-SASTGTITLTASA---------------SIFGAEQVGKLFYLEQPAVDSVPV 209 (823) Q Consensus 151 ~~~f~~~p~~-----~i~~~~s~t~t~-~a~t~~~Tvtas~---------------~~~~a~~vg~~~~~~~~~~~~~~~ 209 (823) -+....+++. .++.....+.+. .+.....+...+. +.+.....+..+++.......+.. T Consensus 153 ~~~v~~g~y~r~y~i~i~~~~~at~~tpdgt~~~~~~~~s~~~ia~~L~~~l~a~~~g~t~~~~g~~i~i~a~s~~~~~t 232 (794) T protein:vir:10 153 LINIRGGQYGRELIVHINGKDVATYKIPDGSKPEHVNNTDAQWLAERLAKQMRINLSGWTVNVGQGFIHVTAPSGQQIDS 232 (794) T ss_pred EEEecccccceEEEeccCCcceeEEEecCCCCcccceecchhhhhhhhhhhhhcccCCceEEeCCeEEEEEeccCceecc Confidence 2333333331 233333333222 2332222222221 122222333333332221111111 Q ss_pred eeeeeeeeeeeeEEeccceeeeE-eccc-ceeecccccCceEEEEeceeccccceEEEEEEecCccEEEEEEecCccccc Q lcl|Aclame:pro 210 WETSKSTSIGDIRRADSNYYRAV-TAGK-TGTLRPSHTEGTSWDGWGGSGDDDTGIEWEYLHSGFGIARITAVNGTTATA 287 (823) Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~~~~~~~ 287 (823) ...... ..+.....+ ...+ ..++...+..+..+ .+.+.........+..+....+.|+|++.++.. .. T Consensus 233 ~s~~~~--------~~~~~~~~v~~~~~~~~~lp~~~~~G~~v-~i~~~~~~~~~~yyv~~~~~~~~w~E~~~~g~~-~~ 302 (794) T protein:vir:10 233 FTTKDG--------YADQLINPVTHYAQSFSKLPPNAPNGYMV-KIVGDASKSADQYYVRYDAERKVWTETLGWNTE-NQ 302 (794) T ss_pred ccccCC--------cCcceeEEEEeccCcceecccCCCCCcEE-EEEeCCCCCcceeEEEEEcCCcEEEEeccccee-EE Confidence 110000 111111111 1111 12233334444333 333333333334455556778999999866543 34 Q ss_pred cEEEEeeccccccccCcceecccCccc-------CCCCccE-------EEEEeceEEEEeCcCCCcEEEEEcccCccccc Q lcl|Aclame:pro 288 EVISYIPSQVVGEDNASYKWAKYAWNS-------VNGYPGT-------VVYYQQRLYFAASTAFPQTIWASRTGDYKDFG 353 (823) Q Consensus 288 ~~~~~~~~~~~~~~~~t~~~~~~~w~~-------~~g~Ps~-------v~f~q~RL~f~~~~~~p~~V~~Sr~gdy~nF~ 353 (823) ....+||+.+++...++++++...|.+ +|++|+| |+||||||+|++ |++|||||+||||||+ T Consensus 303 ~~~~tmP~~l~r~~~~t~~~~~~~w~~r~~Gd~~tnp~psf~g~~~~~v~f~q~RL~f~~----~~~v~~Srtgd~~nF~ 378 (794) T protein:vir:10 303 VLLETMPHALVRAADGNFDFKWLEWSPKSCGDVDTNPWPSFVGSSINDVFFFRNRLGFLS----GENIILSRTAKYFNFY 378 (794) T ss_pred EecccceeEEEEeccceEEeeecccccccccccccCccCcccCCCccEEEEEcceEEEee----CCeEEEEecCCccccc Confidence 556789999999999999999999964 4667665 799999999997 5689999999999999 Q ss_pred cccc--CCCCCcEEEEEcCCCceEEEEEeecC-cEEEEecCcEEEEecCCCccccccceEEEEeecccCc-ccccEEeCC Q lcl|Aclame:pro 354 KSNP--TQDDDRIIYTYAGRQVNEIRHLIDVG-SLVALTSGGEYVITGDQNKVLTPSSFAFSSQGSNGSS-NVPPIAVAN 429 (823) Q Consensus 354 ~~t~--~~DdD~I~~~~~~~~~~~i~~~v~~~-~Ll~~t~~~q~~l~~~~~~~lTP~~~~i~~~s~~g~~-~~~Pv~vg~ 429 (823) ++++ ++|||||+++++++++++|+|+++++ +|+|||+++||+|+++ ++|||+|++++++|+|+|+ .|+|+.+|+ T Consensus 379 ~~t~~~~~DdD~I~~~~ss~~~~~i~~~v~~~~~L~i~T~~~q~~l~~~--~~lTP~~~~~~~~s~~~~~~~~~Pv~vg~ 456 (794) T protein:vir:10 379 PASIANLSNDDPIDVAVSTNRIAILKYAVPFSEELLIWSDEAQFVLTAS--GTLTSRSVELNLTTQFDVQDRARPYGIGR 456 (794) T ss_pred ccccccCCCCccEEEEecCCcceeeEEEeecCCcEEEEecCcEEEEeCC--CcccceeEEEEEEEeecccCCCCceEeCC Confidence 9975 57999999999999999999999996 7999999999999864 5999999999999999986 599999999 Q ss_pred eEEEEecCCCE---EEEEEeeccccceeecchHHHHHHhcCCCceEEEEEcCCCcEEEEEEeCCCeEEEEEEe---cccc Q lcl|Aclame:pro 430 IALFVQEKGSV---VRDLAYSFDVDGYQGNDLTILANHLFQKHSIVDWCFSIVPYSSAFCIRDDGKLLVMTYL---RDQQ 503 (823) Q Consensus 430 ~v~f~~~~g~~---v~e~~~~~~~d~~~~~dlt~~~~hl~~~~~~~~~a~~~~p~~~~~~~~~dg~l~~~ty~---~~q~ 503 (823) +++|++++|++ +|++.|++++|+|++.|||+|++|||++..+..++++++|..++|+++++|+|++|+|+ +||+ T Consensus 457 ~v~f~~~~g~~~~~~r~~~~~~~~d~y~a~Dlt~~~~hl~~~~v~~~~~~~~~~~~~~~~~~~~~~l~~~~y~~~~~e~~ 536 (794) T protein:vir:10 457 NVYFASPRSSYTSIHRYYAVQDVSSVKNSEDITSHVPNYIPNGVFSICGSGTENFCSVLSHGDPSKIFMYKFLYLNEELR 536 (794) T ss_pred eEEEEecCCCeeEEEEEeeeccccCceehhhHHHHHHHhcCCceEEEEEeCCCCcEEEEEEcCCCEEEEEEEeecCCceE Confidence 99999999964 45578999999999999999999999998888899999999999999999999999997 7888 Q ss_pred ceeEEeeccCCceEEEEEEecCCCCEEEEEEEecCCCcEEEEEEeeccccCCcccceeEeeeeeEEeccccceeeeEeec Q lcl|Aclame:pro 504 VFAWAPQSSTGKYESTCSISEGNEDAVYFVVNRTVNGQTVRYIERLSSRLFTSDEDAFFVDSGLSYDGRNTSDRTMTITG 583 (823) Q Consensus 504 v~aW~~w~~~g~~~~~~~~~~~~~d~l~~~v~r~~~g~~~~~~e~~~~~~~~~~~~~~~lD~~~~y~~~~~~~~~~~~~~ 583 (823) |+|||||+|+|.++++|+.. .+|++|++|+|+++|...|+.|+++...+...++++||||+++|.....+ T Consensus 537 v~aW~~~~~~g~~~~~~~~~--~~d~l~~iv~r~~~~~~~r~~~~~~~~~~~~~~~~~~lD~~~~~~~~~~~-------- 606 (794) T protein:vir:10 537 QQSWSHWDFGENVQVLACQS--ISSDMYVILRNEFNTFLARISFTKNAIDLQGEPYRAFMDMKIRYTIPSGT-------- 606 (794) T ss_pred EEeEEEEEcCCcEEEEEEEe--cCCeEEEEEEeCCCEEEEEEEEeecCCCCCCccceeeeecceEEEecCcc-------- Confidence 99999999999999999865 46899999999999999999999998888888899999999988533111 Q ss_pred cccCcCccCcceEEecCCeEEcccccccEEEecccCceeEeeeEEEEEEEEeeEEecCCCceeeEecceeeeeeeeeeee Q lcl|Aclame:pro 584 GSGEWDYLAEYTISVSGGAYFTSSDVGAQLQFPYTGADPDTGYEVSKELRCDIISVTSNTAVVVRANRNVPPSLRNVATT 663 (823) Q Consensus 584 ~~~~l~~~~~~~v~~~dg~~~~~~~vgg~i~l~~~~~~~~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 663 (823) +. ++ . .++ . T Consensus 607 ------~~-------~~------~----~~t------~------------------------------------------ 615 (794) T protein:vir:10 607 ------YN-------DD------T----FTT------S------------------------------------------ 615 (794) T ss_pred ------cc-------cc------c----ccc------e------------------------------------------ Confidence 10 00 0 000 0 Q ss_pred cccccceeeecccccccceEEEEeCCceeCC---EEEcCCEEEe----cCCCcEEEECcccceEEEEcceecCCC-Cccc Q lcl|Aclame:pro 664 NWQMARRTFGGLSHLEGQTVNILSDANVEPQ---KVVSGGAVTL----ESPGAVVHIGLPITAEFETLDININGQ-ETLL 735 (823) Q Consensus 664 ~~g~~~~~~~gl~~l~g~~v~v~~dg~~~~~---~~v~~g~itl----~~~~~~~~~gl~~~~~~~~l~~~~~~~-~~~~ 735 (823) .....+.||+||||++|.+++||.++.. ..+..|..+| +.++++|||||+|++++++|||++..+ |..+ T Consensus 616 ---~~~~~~~g~~~~eg~~v~~~adg~~~~~~~~~~~~~g~~~l~i~~~~~a~~v~vGl~y~s~~~~~~~~i~~~~~~~~ 692 (794) T protein:vir:10 616 ---IHIPTIYGANFGRGKITVLEPDGKITVFEQPTSGWQSDPWLRLSGNLEGREVFIGFNINFVYEFSKFLIKQTTDDGS 692 (794) T ss_pred ---EEcccccCcccccccEEEEecCCceeeeeeeeeeeecceEEEecCCCCCceEEEeeeeeEEEEecceEEEccCCCcc Confidence 0111567899999999999999976654 3333454333 467999999999999999999998754 4444 Q ss_pred cc-----ceeEeeEEEEEEccccEEEecCCCc------eeEeeccCCCcCCCCCCcccceEEEEecCCcCCccEEEEEEc Q lcl|Aclame:pro 736 DK-----KQVIPSVTLVVNASRGIWATTPGGK------WYEYPQREFEFYDDPVDDATGKVEVKLDSNWGKNGRVKIRQL 804 (823) Q Consensus 736 ~~-----~~~i~~~~~~~~~s~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~tg~~~~~~~~~~~~~~~~~i~q~ 804 (823) ++ +.||+++++++.+|.++.+...+.. +.+..+...+....++++.||++++.+ .||+++.+|+|+|+ T Consensus 693 ~~~~~~gr~~l~r~~~~~~~tg~~~v~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~~tg~~~vp~-~g~~~~~~v~i~~d 771 (794) T protein:vir:10 693 TSTEDIGRLQLRRAWVNYEDSGTFDIYVENQSSNWKYTMAGARLGSNTLRAGRLNLGTGQYRFPV-VGNAKFNTVYILSD 771 (794) T ss_pred eeeeccccEEEEEEEEEeeccccEEEEEcCCccccceeeccceeccccccccccccccceEEEEe-cccCceEEEEEEEC Confidence 33 4789999999999999988754321 111222233344556778999999988 57999999999999 Q ss_pred CCCCEEEEEEEEEEEecCC Q lcl|Aclame:pro 805 DPLPLSVLAVIPRLTVGGF 823 (823) Q Consensus 805 ~P~P~tvla~~~~~~~~g~ 823 (823) +||||+||||..|...|=. T Consensus 772 ~P~P~tvlsi~~eg~y~~r 790 (794) T protein:vir:10 772 ETTPLNIIGCGWEGNYLRR 790 (794) T ss_pred CCCceEEEEEEEEEEEecc Confidence 9999999999999999888 No 13 >protein:vir:1543 Length: 801 # NCBI annotation: tail tubular protein B # Family: family:all:825 # MgeID: mge:31 # MgeName: phiYeO3-12 # Cross-refs: genbank:acc:NP_052111;swissprot:trembl:q9t105;genbank:gi:9634037;uniprot:Q9T105;genbank:GeneID:1262408 Probab=100.00 E-value=6.5e-159 Score=887.82 Aligned_cols=714 Identities=13% Similarity=0.113 Sum_probs=515.6 Q ss_pred Cc-eeeeecccccccccccccccchHHHHHHHHhhhhcceeeecCCceecCcceeeeeecCCCC---CceEEEEEECCCC Q lcl|Aclame:pro 1 MA-ISWIQPSFAGGEIGPSLYGRIDMAKYQVALRKCDNFIVRQYGGVENRPGTRFVGAAKYPNR---KCRLIPFQFSTVQ 76 (823) Q Consensus 1 M~-~~~~q~sF~~GElsP~l~~r~Dl~ry~~q~~~~~N~~~~~~GGl~rRPGt~fva~~~~~~~---~~rLipF~~~~~~ 76 (823) |+ +++.++||.+| +++|+|++||++||++|+||+|+|+|||+||||++||+++++++. ...+++|+|+++| T Consensus 1 M~~i~~s~~n~~~G-----vSqq~d~~r~~~q~~~~~N~~~~~~gGl~rRpGt~~va~~~~~~~~~~~~~~~~~~~~~~e 75 (801) T protein:vir:15 1 MALISQSIKNLKGG-----ISQQPDILRFAEQGSVQINGWSSESEGLQKRPPMIHLKTLGPAGYVGAQPYVHLINRDEFE 75 (801) T ss_pred Cceeeeecchhhcc-----eecCcchHhhhhhHhhhhcceeccccCcccCCchheeeeecCCCCcccceeEEEEEeCCce Confidence 99 68999999999 899999999999999999999999999999999999999987542 3466678999999 Q ss_pred eEEEEEeCCeEEEEECCceEeeccccceEEeccc--cccccceeEEEEeCcEEEEEeCCceEEEEEEcC------CCCce Q lcl|Aclame:pro 77 TYALEFGHQYMRVIKDGALVLNSSNVIYEIATPY--TEADLFRIKFTQSADVLTLVHPAYPPKELRRYA------HDNWQ 148 (823) Q Consensus 77 ~Y~l~fg~~~irV~~~~g~v~~t~~~~~~~~tPy--t~~~l~~L~~~qsaD~~fIvn~~~~p~~l~r~~------~~~ws 148 (823) +|+|+|++++||||+.+|.... .+...|| +.+..++|+++|+||++||+|++++|+++.|.. +..|. T Consensus 76 ~y~l~~~~~~irv~~~~G~~~~-----v~~~~~y~~~~~~~~~l~~~~~aD~~fi~nr~~~~~~~~~~~~~~~~~~~~~a 150 (801) T protein:vir:15 76 QYFVVFTGEDIKVFDLDGKEYQ-----VRGDRSYVRTANPREDLRMITVADYTFVTNRKVVVQSNDQSVNLPGFKDQGDA 150 (801) T ss_pred EEEEEEcCCeEEEEccCCcEEE-----EecCCccccccCchhheeEEEEcCEEEEeeCCeeeecccCccccCccCCCCce Confidence 9999999999999998775331 1223334 233456899999999999999999999887643 34454 Q ss_pred eeeEEEec-ccccc--ccccceEEEEecccCCc-----eeeecccccccccccc----ceEEEcccccceecceeeeeee Q lcl|Aclame:pro 149 LVDVVTKN-GPFED--INIDESLTVYASASTGT-----ITLTASASIFGAEQVG----KLFYLEQPAVDSVPVWETSKST 216 (823) Q Consensus 149 ~~~~~f~~-~p~~~--i~~~~s~t~t~~a~t~~-----~Tvtas~~~~~a~~vg----~~~~~~~~~~~~~~~~~~~~~~ 216 (823) +..+.... +..+. ++.......+....... +...+.+......+.. ...+.. ...|...... T Consensus 151 lv~v~~~~yg~t~~I~i~gs~~~~~t~~~gs~~~~~~~~s~~~ia~~l~~~~~~~~p~~~~~~~------~~~w~~~~~~ 224 (801) T protein:vir:15 151 LINVRGGQYGRRLSIEFNGAERAAVQLPDGSQPAHVNEVDGQAIAEKLAAQLRNNLGNPNNDQD------PNKWRFNVGP 224 (801) T ss_pred EEEeeeccCceeEEEEeCCcceEEEEeccCcccchhhhcceeechHHHhhhhhhccCccceecc------CccEEEEecC Confidence 44332111 11112 22222222222111110 0111111111000100 000000 0111110000 Q ss_pred e-----------eeeeEEeccce---eee-EecccceeecccccCceEEEEeceeccccceEEEEEEecCccEEEEEEec Q lcl|Aclame:pro 217 S-----------IGDIRRADSNY---YRA-VTAGKTGTLRPSHTEGTSWDGWGGSGDDDTGIEWEYLHSGFGIARITAVN 281 (823) Q Consensus 217 ~-----------~~~~~~~~~~~---~~~-~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~ 281 (823) . .......++.. ... ....+...-.|..........+.+.........+..+....+.|+|++.+ T Consensus 225 g~~~i~a~~~~~~~~~~t~dg~~~~~~~~~~~~v~~~~~lp~~~~~G~~v~v~~~~~~~~~~y~v~~~~~~~~w~E~a~~ 304 (801) T protein:vir:15 225 GFIHILAPNNDNVWGLQTKDGYADQLINPVTHYTQSFQKLPINAPDGYIVKIVGDTSKTADQYYVRFDLNRKVWVETIGW 304 (801) T ss_pred cEEEEeCCCCcccceeeeccccCceeeeEEeecccceeeeeeecCCCcEEEEEecCCCccceEEEEEEcCCeeEEeeccc Confidence 0 00000011111 000 01111111122222222222333333344444555566788999999876 Q ss_pred CccccccEEEEeeccccccccCcceecccCccc-------CCCCccE-------EEEEeceEEEEeCcCCCcEEEEEccc Q lcl|Aclame:pro 282 GTTATAEVISYIPSQVVGEDNASYKWAKYAWNS-------VNGYPGT-------VVYYQQRLYFAASTAFPQTIWASRTG 347 (823) Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~w~~-------~~g~Ps~-------v~f~q~RL~f~~~~~~p~~V~~Sr~g 347 (823) +... .....+||+.+++..+++|.|+...|.+ +|++|+| |+||||||+|++ |++|||||+| T Consensus 305 g~~~-~~~~~tmp~~lv~~~~~~~~~~~~~w~~r~~gd~~tnp~psf~g~~~~~v~f~q~RL~f~~----~~~v~~Srtg 379 (801) T protein:vir:15 305 NTRT-HLYYHTMPWALVRASDGNFDFKVLEWGARTVGDDTTNPYPSFTGQTINDIFFFRNRLGFLS----GENIILSRTS 379 (801) T ss_pred ccce-eeeccccceEEEeeccceEEEeccccccccCCccccCCcccccCCCceEEEEEcceEEEee----CCeEEEEecC Confidence 6543 4446779999999999999999999975 4566555 899999999998 5789999999 Q ss_pred Cccccccccc--CCCCCcEEEEEcCCCceEEEEEeecC-cEEEEecCcEEEEecCCCccccccceEEEEeecccCc-ccc Q lcl|Aclame:pro 348 DYKDFGKSNP--TQDDDRIIYTYAGRQVNEIRHLIDVG-SLVALTSGGEYVITGDQNKVLTPSSFAFSSQGSNGSS-NVP 423 (823) Q Consensus 348 dy~nF~~~t~--~~DdD~I~~~~~~~~~~~i~~~v~~~-~Ll~~t~~~q~~l~~~~~~~lTP~~~~i~~~s~~g~~-~~~ 423 (823) |||||+++++ ++|||||+++++++++++|+|+++++ +|+|||+++||+|+++ ++|||+|++++++|+|+|+ .++ T Consensus 380 d~~nF~~~t~~~~~DdD~i~~~~~~~~~~~i~~~v~~~~~L~i~t~~~q~~ls~~--~~lTP~~~~~~~~s~~~~~~~~~ 457 (801) T protein:vir:15 380 KYFNFFPASVSNYSDDDPIDVAVSHNRVSTLKYAVPFSEELLLWSDQAQFVLTAS--GILSSRSVELNLTTQFDVQDRAR 457 (801) T ss_pred CccccccccccCCCCCccEEEEecCCcceeeEEEeecCCcEEEEecCcEEEEcCC--CcccceeEEEEEEEeeeccCCCC Confidence 9999999975 57999999999999999999999985 7999999999999864 5999999999999999875 699 Q ss_pred cEEeCCeEEEEecCCCE---EEEEEeeccccceeecchHHHHHHhcCCCceEEEEEcCCCcEEEEEEeCCCeEEEEEEe- Q lcl|Aclame:pro 424 PIAVANIALFVQEKGSV---VRDLAYSFDVDGYQGNDLTILANHLFQKHSIVDWCFSIVPYSSAFCIRDDGKLLVMTYL- 499 (823) Q Consensus 424 Pv~vg~~v~f~~~~g~~---v~e~~~~~~~d~~~~~dlt~~~~hl~~~~~~~~~a~~~~p~~~~~~~~~dg~l~~~ty~- 499 (823) |+.+|+++||++++|++ +|+|.|++.+|+|++.|||+|++|||++..+..++++++|..++|+.+++|+|++|+|+ T Consensus 458 Pv~vg~~v~f~~~~g~~~~~~r~~~~~~~~d~y~a~Dlt~~~~hl~~~~v~~~~~~~~~~~~~~~~~~~~~~l~~~~y~~ 537 (801) T protein:vir:15 458 PHGVGRNVYFASPRASFTSINRYYAVQDVSSVKNAEDMTAHVPNYIPNGVFSISGTTAENFAAILTSGAPNRVYIYKFLY 537 (801) T ss_pred ceEeCCeEEEEecCCCeeEEEEEEeecccccceehhhHHHHHHHhcCCceEEEEEeCCCCcEEEEEEcCCCEEEEEEEec Confidence 99999999999999964 46688999999999999999999999987667777777888889999999999999996 Q ss_pred --ccccceeEEeeccCCceEEEEEEecCCCCEEEEEEEecCCCcEEEEEEee-ccccCCcccceeEeeeeeEEeccccce Q lcl|Aclame:pro 500 --RDQQVFAWAPQSSTGKYESTCSISEGNEDAVYFVVNRTVNGQTVRYIERL-SSRLFTSDEDAFFVDSGLSYDGRNTSD 576 (823) Q Consensus 500 --~~q~v~aW~~w~~~g~~~~~~~~~~~~~d~l~~~v~r~~~g~~~~~~e~~-~~~~~~~~~~~~~lD~~~~y~~~~~~~ 576 (823) +||+|+|||||+|+|.++++|+. ..+|+||++|+|+ +|.+.+++|.+ +...+....+++||||++.|..... T Consensus 538 ~~~e~~v~aW~~~~~~g~~~~~~~~--~~~d~l~~~v~r~-~~~~~~r~~~~~~~~~~~~~~~~~~lD~~~~~~~~~~-- 612 (801) T protein:vir:15 538 IDEEIRQQSWSHWDFGDNVTVFAAQ--VINSTMTVLMGNE-HAVWMGRLHFTKNSIDIPGEPYRLYIDAKRKYTIPAG-- 612 (801) T ss_pred CCCceEEEeeEEEEcCCCEEEEEEE--ecCCEEEEEEEec-CcEEEEEEEEccccccCCCcceeeeeeeeeeEeeccc-- Confidence 46778999999999999999874 3579999999998 45555555543 4445566778999999987642210 Q ss_pred eeeEeeccccCcCccCcceEEecCCeEEcccccccEEEecccCceeEeeeEEEEEEEEeeEEecCCCceeeEecceeeee Q lcl|Aclame:pro 577 RTMTITGGSGEWDYLAEYTISVSGGAYFTSSDVGAQLQFPYTGADPDTGYEVSKELRCDIISVTSNTAVVVRANRNVPPS 656 (823) Q Consensus 577 ~~~~~~~~~~~l~~~~~~~v~~~dg~~~~~~~vgg~i~l~~~~~~~~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 656 (823) .+... T Consensus 613 -------------------------t~~~~-------------------------------------------------- 617 (801) T protein:vir:15 613 -------------------------TYNDD-------------------------------------------------- 617 (801) T ss_pred -------------------------eeccC-------------------------------------------------- Confidence 00000 Q ss_pred eeeeeeecccccceeeecccccccceEEEEeCCceeCCEEEcCC-------EEEecCCCcEEEECcccceEEEEcceecC Q lcl|Aclame:pro 657 LRNVATTNWQMARRTFGGLSHLEGQTVNILSDANVEPQKVVSGG-------AVTLESPGAVVHIGLPITAEFETLDININ 729 (823) Q Consensus 657 ~~~~~~~~~g~~~~~~~gl~~l~g~~v~v~~dg~~~~~~~v~~g-------~itl~~~~~~~~~gl~~~~~~~~l~~~~~ 729 (823) ......+...+.||+||||++|.+++||.+++..++.+| +++++.++++|||||+|++++++|||+++ T Consensus 618 -----~~~~~~~~~~~~gl~~l~g~~v~v~~dG~~~~~~~~~~g~~~~~~~~i~~~~~~~~v~vGl~y~~~~~~~~~~~~ 692 (801) T protein:vir:15 618 -----TYQTSISLATIYGMNFTKGRVSVVFPDGKIIEVDQPINGWSSDPVLRLDGNQEGQVVYIGFNIPFTYTFSKFLIK 692 (801) T ss_pred -----ceecccccccccccccccceEEEEEeCCceeeeeeecCcccCcceEEEcCCCCCcEEEEeeeeeEEEEecceEEe Confidence 000112334467899999999999999999999999888 55666899999999999999999999986 Q ss_pred CC-Cccc-----ccceeEeeEEEEEEccccEEEecCCCc----eeEeeccCC--CcCCCCCCcccceEEEEecCCcCCcc Q lcl|Aclame:pro 730 GQ-ETLL-----DKKQVIPSVTLVVNASRGIWATTPGGK----WYEYPQREF--EFYDDPVDDATGKVEVKLDSNWGKNG 797 (823) Q Consensus 730 ~~-~~~~-----~~~~~i~~~~~~~~~s~~~~~~~~~~~----~~~~~~~~~--~~~~~~~~~~tg~~~~~~~~~~~~~~ 797 (823) .+ |... ..++||++++|++.+|..+.+..++.. .+..+.|-. +.....|+++||++++.. .||+++. T Consensus 693 ~~~~~~~~~~~~~~rl~l~r~~~~~~~tg~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tg~~~vp~-~g~~~~~ 771 (801) T protein:vir:15 693 KTAEDGSTATEDIGRLQLRRAWVNYEDSGAFTIRVNNLSREFIYTMAGARLGSDNLRVGRSNIGTGQYRFPV-VGNAQTN 771 (801) T ss_pred ccCCCCCceeeeeccEEEEEEEEEeccCcceEEEECCcccccceeecCcccccccccccccccccceEEEEE-eecCceE Confidence 43 2211 123689999999999988888664431 112233321 123345778999999987 6899999 Q ss_pred EEEEEEcCCCCEEEEEEEEEEEecCC Q lcl|Aclame:pro 798 RVKIRQLDPLPLSVLAVIPRLTVGGF 823 (823) Q Consensus 798 ~~~i~q~~P~P~tvla~~~~~~~~g~ 823 (823) +|+|+|++||||+||||..|...|=. T Consensus 772 ~v~i~~d~P~P~tvlsi~~e~~y~~r 797 (801) T protein:vir:15 772 LVTIESDASTPLNIIGCGWEGNYLRR 797 (801) T ss_pred EEEEEECCCCcEEEEEEEEEEEEecc Confidence 99999999999999999999999888 No 14 >protein:vir:80253 Length: 777 # NCBI annotation: putative tail tubular protein B # Family: family:all:825 # MgeID: mge:1879 # MgeName: LKA1 # Cross-refs: genbank:acc:YP_001522886;genbank:gi:158345179;genbank:GeneID:5687516 Probab=100.00 E-value=5.5e-158 Score=882.74 Aligned_cols=703 Identities=12% Similarity=0.062 Sum_probs=495.8 Q ss_pred Cc-eeeeecccccccccccccccchHHHHHHHHhhhhcceeeecCCceecCcceeeeeecCCC---CCceEEEEEECCCC Q lcl|Aclame:pro 1 MA-ISWIQPSFAGGEIGPSLYGRIDMAKYQVALRKCDNFIVRQYGGVENRPGTRFVGAAKYPN---RKCRLIPFQFSTVQ 76 (823) Q Consensus 1 M~-~~~~q~sF~~GElsP~l~~r~Dl~ry~~q~~~~~N~~~~~~GGl~rRPGt~fva~~~~~~---~~~rLipF~~~~~~ 76 (823) |+ +++.|+||++| |++|+|++||++||++|+||+++|+|||+||||++||+++++++ ...++|+|.+++++ T Consensus 1 M~~i~~~~~nf~~G-----vS~q~D~~ry~~q~~~~~N~~~~~~gG~~rRpGt~fv~~l~~~~~~~~~~~~~~~~~~~e~ 75 (777) T protein:vir:80 1 MSYFAGSYRQLLFG-----VSQQTAKDRLEGQVESQLNMQSDLVTGPRRRSPVHLIADAMAATDANRLAYSLATFSGREV 75 (777) T ss_pred Cceeeeecchhhcc-----cccCCchHHhhhHHhhhhcceeeeccCceeCcchHhhhhhcCCCcccceeEEEEecCCCee Confidence 99 68999999999 99999999999999999999999999999999999999998654 45677888888999 Q ss_pred eEEEEEeCCeEEEEECC-ceEeeccccceEEeccccccccceeEEEEeCcEEEEEeCCceEEEEEEcCCCC-ceeee--E Q lcl|Aclame:pro 77 TYALEFGHQYMRVIKDG-ALVLNSSNVIYEIATPYTEADLFRIKFTQSADVLTLVHPAYPPKELRRYAHDN-WQLVD--V 152 (823) Q Consensus 77 ~Y~l~fg~~~irV~~~~-g~v~~t~~~~~~~~tPyt~~~l~~L~~~qsaD~~fIvn~~~~p~~l~r~~~~~-ws~~~--~ 152 (823) +|+|+|++++||||+.. |.++.....+|. ++++.++|+|+|+||++||+|++++|+++.|.++.. |.... + T Consensus 76 ~~~l~~g~g~irv~~~~~g~~~~~~~~~Yl-----~a~~~~~l~~~q~aD~~fi~n~~~~p~~~~~~~~~~~~~~~~~~~ 150 (777) T protein:vir:80 76 LLLVDTLDGTLTILDDATGEVLFTGTNSYL-----TAGTGRSIRFAALDDSVFVANTEVIPQTQLWSGASAYPDPTRAGY 150 (777) T ss_pred EEEEEecCCeEEEEECCCCeEEEecCCCce-----eeccccceeEEEEcCEEEEEeCCccceeeecccCCCccCcccceE Confidence 99999999999999974 445544444443 344456899999999999999999999999887643 55443 2 Q ss_pred EEeccccccccccceEEEEecccCCceeeeccccccccccccceEEEccc--------ccceecceeeeeeeeeeee--- Q lcl|Aclame:pro 153 VTKNGPFEDINIDESLTVYASASTGTITLTASASIFGAEQVGKLFYLEQP--------AVDSVPVWETSKSTSIGDI--- 221 (823) Q Consensus 153 ~f~~~p~~~i~~~~s~t~t~~a~t~~~Tvtas~~~~~a~~vg~~~~~~~~--------~~~~~~~~~~~~~~~~~~~--- 221 (823) .+..+..+.. ...+...........+.+...+.....+.......... .....+.|..........+ T Consensus 151 ~~v~~~~~g~--~y~i~i~~~~~~~~~t~~~~t~~~~~~~~~~~~ia~~L~~~~~~~~~~~s~~~~~~~~~g~~~~i~~~ 228 (777) T protein:vir:80 151 LYVVAGAFSK--QYRLSITNQVTGVTTSVDVTTSATEASQATGEYVITQLRTAAEADATIGTAAGFAYYQDGAYLYVTAP 228 (777) T ss_pred EEeeccCCCc--eeeEeecCCcCceeEEEecCCcccccccccchhhhhhhhhhhccccceeecCceEEEeCCcEEEEEec Confidence 3332222111 11111111111111111111111111111100000000 0000111111110000000 Q ss_pred -----EEecccee-eeEeccc--ceeecccccCc--eEEEEeceeccccceEEEEEEecCccEEEEEEecCccccccEEE Q lcl|Aclame:pro 222 -----RRADSNYY-RAVTAGK--TGTLRPSHTEG--TSWDGWGGSGDDDTGIEWEYLHSGFGIARITAVNGTTATAEVIS 291 (823) Q Consensus 222 -----~~~~~~~~-~~~~~~~--t~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~~~~~~~~~~~ 291 (823) ...++..+ ....... ...-.|..... ..+....+...+ ..|..+....|.|++++.++..... . T Consensus 229 ~~~~~t~~~g~~~~~~~~~~~v~~~~~lp~~~~~~~~~~~~~~~~~~~---~~y~~~~~~~~~w~e~~~~~~~~~~---~ 302 (777) T protein:vir:80 229 EAIAVSTDSGSNFLRASNAASIRDAAELPAKLPADADGFIIATGAAKN---KTYFRWVDLERKWDEDASRGAQAEL---I 302 (777) T ss_pred CceeEecCCcCccceeeeeEEEeeccccccccccccceEEEeCCCCCC---ceEEEEEccCcEEEEeecccccccc---c Confidence 00001100 0000000 00001111111 111112222222 2344455678899999877654332 4 Q ss_pred EeeccccccccCcceecccCccc-------CCCCccE-------EEEEeceEEEEeCcCCCcEEEEEcccCcccccccc- Q lcl|Aclame:pro 292 YIPSQVVGEDNASYKWAKYAWNS-------VNGYPGT-------VVYYQQRLYFAASTAFPQTIWASRTGDYKDFGKSN- 356 (823) Q Consensus 292 ~~~~~~~~~~~~t~~~~~~~w~~-------~~g~Ps~-------v~f~q~RL~f~~~~~~p~~V~~Sr~gdy~nF~~~t- 356 (823) +||+.++... +++.++...|.+ +||||+| |+||||||+|++ |++|||||+|||+||++++ T Consensus 303 t~p~~l~~~~-~~~~~~~~~w~~r~~gd~~tn~~Psf~g~~i~~v~f~q~RL~f~~----~~~v~~Srtgd~~nF~~~s~ 377 (777) T protein:vir:80 303 DMPLRITYSA-PNFSLTALNYERRASGDATSNPALKFTEQGISGMTTMQGRLVLLA----GEYVCMSASGNPLRWFRASV 377 (777) T ss_pred ccceEEEecC-CceEeeccCCccccccccccCCCceecCCceeEEEEEcceeeeec----CCeEEEEeccCccccccccc Confidence 6888887755 589988888865 5899975 799999999998 4679999999999999998 Q ss_pred -cCCCCCcEEEEEcCCCceEEEEEeecC-cEEEEecCcEEEEecCCCccccccceEEEEeecccC-cccccEEeCCeEEE Q lcl|Aclame:pro 357 -PTQDDDRIIYTYAGRQVNEIRHLIDVG-SLVALTSGGEYVITGDQNKVLTPSSFAFSSQGSNGS-SNVPPIAVANIALF 433 (823) Q Consensus 357 -~~~DdD~I~~~~~~~~~~~i~~~v~~~-~Ll~~t~~~q~~l~~~~~~~lTP~~~~i~~~s~~g~-~~~~Pv~vg~~v~f 433 (823) +++|||||+++++++++++|+|+++++ +|+|||+++||+|+++ ++|||+|++++++|+|++ ++|+|+.+|+++|| T Consensus 378 ~~~~DdDpI~~~~ss~~~~~i~~~v~~~~~L~i~T~~~e~~l~~~--~~lTP~~~~~~~~s~~~~~~~~~Pv~vG~~v~F 455 (777) T protein:vir:80 378 STQSDDDPIEVAATAPVASPYEYAVAFNKDLVLFAKTHQGLVPGA--NLLTSRNATAAVVTEYSFQNSCSPVVAGRTVFF 455 (777) T ss_pred cCCCCCccEEEEEcCCcceeeeeeeecCCcEEEEecCceEEEeCC--CcccceeEEEEEEEeeccCCCCCceEeCCeEEE Confidence 467999999999999999999999985 8999999999999864 699999999999999976 46999999999999 Q ss_pred EecC-CC--EEEEEEee-ccccceeecchHHHHHHhcCCCceEEEEEcCCCcEEEEEEeCCCeEEEEEEe---cccccee Q lcl|Aclame:pro 434 VQEK-GS--VVRDLAYS-FDVDGYQGNDLTILANHLFQKHSIVDWCFSIVPYSSAFCIRDDGKLLVMTYL---RDQQVFA 506 (823) Q Consensus 434 ~~~~-g~--~v~e~~~~-~~~d~~~~~dlt~~~~hl~~~~~~~~~a~~~~p~~~~~~~~~dg~l~~~ty~---~~q~v~a 506 (823) ++++ |+ +||||.|+ +++|+|+++|||+|++||+++ .+.+|++|++|++++|++++||+|++|+|+ +||+|+| T Consensus 456 v~~r~g~~s~v~e~~~~~~~~d~y~a~Dlt~~~~hl~~~-~v~~~a~s~~p~~v~~~~~~dg~l~~~ty~~~~~e~~v~a 534 (777) T protein:vir:80 456 ASPRSGPWSAVWEMLPSQYTDAQVEASDSTSHLPKYIAG-PVRFLATSSTTSIVVVGTSNLRELVVHEYLWQGGEKVHAA 534 (777) T ss_pred EecCCCceeEEeeeeecccccCceehhHHHHHHHHhcCC-ceEEEEEcCCCceEEEEEcCCCeEEEEEEeecCCceEEEe Confidence 9765 54 79999998 678999999999999999997 599999999999999999999999999997 7888999 Q ss_pred EEeeccCCceEEEEEEecCCCCEEEEEEEecCCCcEEEEEEeeccccCCc--ccceeEeee----eeEEeccccceeeeE Q lcl|Aclame:pro 507 WAPQSSTGKYESTCSISEGNEDAVYFVVNRTVNGQTVRYIERLSSRLFTS--DEDAFFVDS----GLSYDGRNTSDRTMT 580 (823) Q Consensus 507 W~~w~~~g~~~~~~~~~~~~~d~l~~~v~r~~~g~~~~~~e~~~~~~~~~--~~~~~~lD~----~~~y~~~~~~~~~~~ 580 (823) ||||+|+|+|+++|++ +|+||++|+|+ ..+|||||+.....+ .++++|||| +.+|++..+.... T Consensus 535 W~r~~~~g~v~~v~~i----~d~l~~iv~r~----~~~~le~~~~~~~~d~~~~~~~~~D~~~~~~~~~~~~~~~~~~-- 604 (777) T protein:vir:80 535 WHKWSFPQDITGAYFR----GDRLILLFHVA----GRVILGELFMQRLGDAQSIPGGFLDLYRVGAANADEEVAIPAF-- 604 (777) T ss_pred eEEeccCCcEEEEEEE----CCEEEEEEEcC----CeEEEEEEeeccCCCCcccceeeeeeeeeeeeeeCCccceeEe-- Confidence 9999999999999997 68999999995 359999998766533 356789998 4555543322111 Q ss_pred eeccccCcCccCcceEE-ecCCeEEcccccccEEEecccCceeEeeeEEEEEEEEeeEEecCCCceeeEecceeeeeeee Q lcl|Aclame:pro 581 ITGGSGEWDYLAEYTIS-VSGGAYFTSSDVGAQLQFPYTGADPDTGYEVSKELRCDIISVTSNTAVVVRANRNVPPSLRN 659 (823) Q Consensus 581 ~~~~~~~l~~~~~~~v~-~~dg~~~~~~~vgg~i~l~~~~~~~~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 659 (823) +++|+++.... ++.+.. T Consensus 605 ------~~~~~~~~~~~~v~~~~~-------------------------------------------------------- 622 (777) T protein:vir:80 605 ------AADLYPEDSTFAYKLSGE-------------------------------------------------------- 622 (777) T ss_pred ------eccccCCcceeEEEecCc-------------------------------------------------------- Confidence 23333322211 100000 Q ss_pred eeeecccccceeeecccccccceEEEEeCCceeCCEEEcCCEEEecCCCcEEEECcccceEEEEcceecCCC-Cccccc- Q lcl|Aclame:pro 660 VATTNWQMARRTFGGLSHLEGQTVNILSDANVEPQKVVSGGAVTLESPGAVVHIGLPITAEFETLDININGQ-ETLLDK- 737 (823) Q Consensus 660 ~~~~~~g~~~~~~~gl~~l~g~~v~v~~dg~~~~~~~v~~g~itl~~~~~~~~~gl~~~~~~~~l~~~~~~~-~~~~~~- 737 (823) ...+.++...+..|| .+..++++++.++.+|||||+|+++++++|++++.+ |+.+++ T Consensus 623 ---------------~~~~~~~~~~v~~~~------~~~~~~v~~~~~~~~v~VGl~y~s~~~~~~~~~~~~~g~~~~~~ 681 (777) T protein:vir:80 623 ---------------FQSLGQRCGDRRVDG------ATVYIKVVGAQAGDQYRIGLRYLSKLGPTRPILRDPNGVPITTE 681 (777) T ss_pred ---------------ccccceeeeeEEeCC------ceeeEEEcCCCCCCEEEEeeeeEEEEEeCceEEeCCCCceeeec Confidence 000001111112222 234578899999999999999999999999999764 666654 Q ss_pred ceeEeeEEEEEEccccEEEecCCCceeEeeccC-------CCcCCCCCCcccceEEEEecCCcCCccEEEEEEcCCCCEE Q lcl|Aclame:pro 738 KQVIPSVTLVVNASRGIWATTPGGKWYEYPQRE-------FEFYDDPVDDATGKVEVKLDSNWGKNGRVKIRQLDPLPLS 810 (823) Q Consensus 738 ~~~i~~~~~~~~~s~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~tg~~~~~~~~~~~~~~~~~i~q~~P~P~t 810 (823) ++||++++|++++|.++.+........+++.+. .+.....|+++||++++.+ .||+++.+|+|+|++||||| T Consensus 682 r~~i~r~~~~~~~sg~~~v~v~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~tg~~~vp~-~~~~~~~~v~i~~d~P~P~t 760 (777) T protein:vir:80 682 RTQLHRLTWSLDSTGEVTFRVADQARGESAYTTTPLRLYSRDLGAGLPLAATATLDTPA-RVDMQTAQFSLETDDYYDMN 760 (777) T ss_pred CeEEEEEEEEeeccccEEEEEcCCCCcceeeeecCceecccccccccccccceEEEEEE-eecCcceEEEEEECCCCceE Confidence 569999999999999999986554444433321 1222344778999999987 58999999999999999999 Q ss_pred EEEEEEEEEecCC Q lcl|Aclame:pro 811 VLAVIPRLTVGGF 823 (823) Q Consensus 811 vla~~~~~~~~g~ 823 (823) ||||..|...|=. T Consensus 761 ilsi~~e~~y~~r 773 (777) T protein:vir:80 761 ITSLEYGFRYNQR 773 (777) T ss_pred EEEEEEEEEeecc Confidence 9999999999888 No 15 >protein:vir:8887 Length: 808 # NCBI annotation: tail tubular protein B # Family: family:all:825 # MgeID: mge:161 # MgeName: gh-1 # Cross-refs: genbank:acc:NP_813776;genbank:gi:29366731;genbank:GeneID:1258831 Probab=100.00 E-value=1.2e-155 Score=870.01 Aligned_cols=716 Identities=15% Similarity=0.138 Sum_probs=521.3 Q ss_pred Cc-eeeeecccccccccccccccchHHHHHHHHhhhhcceeeecCCceecCcceeeeeecCC---CCCceEEEEEECCCC Q lcl|Aclame:pro 1 MA-ISWIQPSFAGGEIGPSLYGRIDMAKYQVALRKCDNFIVRQYGGVENRPGTRFVGAAKYP---NRKCRLIPFQFSTVQ 76 (823) Q Consensus 1 M~-~~~~q~sF~~GElsP~l~~r~Dl~ry~~q~~~~~N~~~~~~GGl~rRPGt~fva~~~~~---~~~~rLipF~~~~~~ 76 (823) |+ +.+.++||.+| +++|.|++||++||++|+||+|+|+|||+||||++||++++++ +.+.+|++|.|++.| T Consensus 1 M~~v~~s~~n~~~G-----vSqq~d~~R~~~q~~~~~N~~~~~~gG~~rRpgt~~v~~l~~~~~~~~~~~~~~~~~~~~~ 75 (808) T protein:vir:88 1 MGLVSQSVKNLKGG-----ISQQPDILRFSNQGALQINGWSSETQGLQKRPPTTFTKRLQNKGFLGTKPLVHLINRDAQE 75 (808) T ss_pred Ccceeeecchhccc-----eeccchhHhhhhhhhhhhcceeeeccccccCCchheeeeeeccCCCCCCcEEEEEEeCcCc Confidence 99 68999999999 9999999999999999999999999999999999999998654 457889999999999 Q ss_pred eEEEEEeCCeEEEEECCceEeeccccceEEeccc--cccccceeEEEEeCcEEEEEeCCceEEE------EEEcCCCCce Q lcl|Aclame:pro 77 TYALEFGHQYMRVIKDGALVLNSSNVIYEIATPY--TEADLFRIKFTQSADVLTLVHPAYPPKE------LRRYAHDNWQ 148 (823) Q Consensus 77 ~Y~l~fg~~~irV~~~~g~v~~t~~~~~~~~tPy--t~~~l~~L~~~qsaD~~fIvn~~~~p~~------l~r~~~~~ws 148 (823) +|+|+|++++||||+.+|... ..+...|| +.+++++|+++|+||++||+|++++|++ ..+..+++|. T Consensus 76 ~y~v~~~~~~i~v~~~~G~~~-----~v~~~~~y~~~~~~~~~l~~~tvaD~~fi~n~~~~~~~~~~~~~~~~~~~~~~~ 150 (808) T protein:vir:88 76 QYFVGFSGTGLAVWDLKGNNY-----TVRGYNGYANCANPRTDLRLITVADYTFVVNRNTVCQMGSTLTHAAYPRLDGRA 150 (808) T ss_pred eEEEEEeCCeEEEEEcCCceE-----EEeecCcceEecCChhheeEEEEcCEEEEEcCCcceeecccccccCCCCCCccE Confidence 999999999999999866322 11233344 3455778999999999999999999984 3455678886 Q ss_pred eeeEEEeccccc-----cccccce-----EE-EEecccCCceeeec------cccccccccccceEEEcccccceeccee Q lcl|Aclame:pro 149 LVDVVTKNGPFE-----DINIDES-----LT-VYASASTGTITLTA------SASIFGAEQVGKLFYLEQPAVDSVPVWE 211 (823) Q Consensus 149 ~~~~~f~~~p~~-----~i~~~~s-----~t-~t~~a~t~~~Tvta------s~~~~~a~~vg~~~~~~~~~~~~~~~~~ 211 (823) +..+. .+++. .++...+ .+ .+..+......... ..+...+..++..+............|. T Consensus 151 ~~~vr--~g~y~~~y~i~i~g~~s~~~~t~t~~~~~~s~~~v~~~~~~~~~~~~~~~~~~~ia~~l~~~~~~~~~~~~~~ 228 (808) T protein:vir:88 151 IINVR--GGQYGRTLSITINGDGTGSSPQASIKMPNGSAEKVPAGDPYAGMNQVDMTDASWIAAELARQLTVSLGGSGWS 228 (808) T ss_pred EEEEc--ccccCceEEEEEecCCcceeeeEeEEEccCcccceeeccceeecccCCccccccchhhheeeeeecccccceE Confidence 65442 22221 1211100 00 01111111100000 0000000111111000000000001111 Q ss_pred eeeeeeeeeeEEe-----------ccceeeeE----ecccceeecccccCceEEEEeceeccccceEEEEEEecCccEEE Q lcl|Aclame:pro 212 TSKSTSIGDIRRA-----------DSNYYRAV----TAGKTGTLRPSHTEGTSWDGWGGSGDDDTGIEWEYLHSGFGIAR 276 (823) Q Consensus 212 ~~~~~~~~~~~~~-----------~~~~~~~~----~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 276 (823) .........+... ++...... ...+.....|..........+.+.........|..+....+.|+ T Consensus 229 ~~~~~~~~~i~~~a~~~~~~~~t~~g~~~~~~~~~~~~v~~~~~lp~~~p~g~~v~i~~~~~~~~~~~yv~~~~~~~~w~ 308 (808) T protein:vir:88 229 FQAGTGWILINAPANDNVRQIATKDGYADTLLSGFIYQVQTFTKLPANAPPGYLVEITGESARSGDNYWVQYDASGKVWK 308 (808) T ss_pred EEeccceEEEEeccCceeEEEcccCCcCcceeeeeeeeccceeeccccCCCCcEEEEEecCCCCCceeEEEEEcCCeEEE Confidence 1111000011111 11000000 00011111122222222222333333333344444557788999 Q ss_pred EEEecCccccccEEEEeeccccccccCcceecccCccc-------CCCCccE-------EEEEeceEEEEeCcCCCcEEE Q lcl|Aclame:pro 277 ITAVNGTTATAEVISYIPSQVVGEDNASYKWAKYAWNS-------VNGYPGT-------VVYYQQRLYFAASTAFPQTIW 342 (823) Q Consensus 277 ~t~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~w~~-------~~g~Ps~-------v~f~q~RL~f~~~~~~p~~V~ 342 (823) +++.++.... ....+||+.+++...+++.|+..+|++ +||+|+| |+||||||+|++ |++|| T Consensus 309 e~~~~~~~~~-~~~~tmp~~lv~~~~~~~~~~~~~w~~r~~Gd~~tnp~psf~g~~~~~v~f~q~RL~f~~----~~~v~ 383 (808) T protein:vir:88 309 ETAKPKIIAG-FNNATLPHALVRAADGQFDWTPLTWDGRNAGDDDTNPMPSFVGATINDVFFFRNRLGFLS----GENVV 383 (808) T ss_pred Eeeeccceee-ecccceeEEEEecCCceEEEEecccccccccccccCccceecCCceeEEEEEcceEEEee----CCeEE Confidence 9987766543 334679999999999999999999976 4666665 789999999998 56899 Q ss_pred EEcccCccccccccc--CCCCCcEEEEEcCCCceEEEEEeecC-cEEEEecCcEEEEecCCCccccccceEEEEeecccC Q lcl|Aclame:pro 343 ASRTGDYKDFGKSNP--TQDDDRIIYTYAGRQVNEIRHLIDVG-SLVALTSGGEYVITGDQNKVLTPSSFAFSSQGSNGS 419 (823) Q Consensus 343 ~Sr~gdy~nF~~~t~--~~DdD~I~~~~~~~~~~~i~~~v~~~-~Ll~~t~~~q~~l~~~~~~~lTP~~~~i~~~s~~g~ 419 (823) |||+|||+||++++. +.|||||+++++++++++|+|+++++ +|+|||+++||+|+++ ++|||+|++++++|+|+| T Consensus 384 ~Srtgd~~nF~~~t~~~~~DdD~i~~~~~~~~~~~i~~~v~~~~~L~i~T~~~e~~l~~~--~~lTP~~~~~~~~s~~~~ 461 (808) T protein:vir:88 384 MSRTSKYFNFFPSSVATLSDDDPIDVAISHNRISILKYAVPFSEQLLLWSDQAQFVLSSK--TILSSKTIELDLTTEFDV 461 (808) T ss_pred EEeccCcccccCCcccCCCCCccEEEEecCCccceeeEEeecCCcEEEEecCcEEEEeCC--CcccceeEEEEEEEEecc Confidence 999999999999984 57999999999999999999999995 8999999999999974 699999999999999997 Q ss_pred c-ccccEEeCCeEEEEecCCCEE---EEEEeeccccceeecchHHHHHHhcCCCceEEEEEcCCCcEEEEEEeCCCeEEE Q lcl|Aclame:pro 420 S-NVPPIAVANIALFVQEKGSVV---RDLAYSFDVDGYQGNDLTILANHLFQKHSIVDWCFSIVPYSSAFCIRDDGKLLV 495 (823) Q Consensus 420 ~-~~~Pv~vg~~v~f~~~~g~~v---~e~~~~~~~d~~~~~dlt~~~~hl~~~~~~~~~a~~~~p~~~~~~~~~dg~l~~ 495 (823) + .|+|+.+|++++|++++|+++ |+|.|++++|+|+++|||+|++||+++..+.+++++++|..++|++++||+|++ T Consensus 462 ~~~~~Pv~vG~~v~f~~~~g~~~~v~r~~~~~~~~d~y~~~dlt~~~~h~~~~~~~~~~~~~~~~~~~v~~~~~~g~l~~ 541 (808) T protein:vir:88 462 SDGARPYGIGRGVYFAAPRASFTSLKRYYAIQDVSDVKSAEDVSAHVPSYITNTVHAIHGSGTENFVSILSDGSPNKVFI 541 (808) T ss_pred cCCCCceEeCCeEEEEecCCCeeEEEEEEEeeeccCceehhhHHHHHHHhcCCCeEEEEEeCCCCeEEEEEEcCCCEEEE Confidence 5 699999999999999999753 678999999999999999999999999989999999999999999999999999 Q ss_pred EEEe---ccccceeEEeeccCCceEEEEEEecCCCCEEEEEEEecCCCcEEEEEEeecccc----CCcccceeEeeeeeE Q lcl|Aclame:pro 496 MTYL---RDQQVFAWAPQSSTGKYESTCSISEGNEDAVYFVVNRTVNGQTVRYIERLSSRL----FTSDEDAFFVDSGLS 568 (823) Q Consensus 496 ~ty~---~~q~v~aW~~w~~~g~~~~~~~~~~~~~d~l~~~v~r~~~g~~~~~~e~~~~~~----~~~~~~~~~lD~~~~ 568 (823) |+|+ +||+|+|||||+|+|.++++|..++..+|.||++|+|..+ .|||||+... +...++++||||+++ T Consensus 542 ~~y~~~~~e~~v~aW~r~~~~g~~~~~~~~~~~~~d~l~~vV~r~~~----~~ler~~~~~~~~~~~~~~~~~~lD~~~~ 617 (808) T protein:vir:88 542 YKFLYLDEILQQQSFSHWEFGDAATTRVLAASCIGSYCYLMIDRPEG----LCLERMEFTQHTIDYSIEPYRTYMDMKKT 617 (808) T ss_pred EEEeccCCceeEEeeEEEecCCCeeEEEEEEeccCCEEEEEEEcCCc----EEEEEEeeccCCCCCccccceeeeeeeee Confidence 9997 7889999999999999999999999899999999999643 6899997543 345567899999998 Q ss_pred EeccccceeeeEeeccccCcCccCcceEEecCCeEEcccccccEEEecccCceeEeeeEEEEEEEEeeEEecCCCceeeE Q lcl|Aclame:pro 569 YDGRNTSDRTMTITGGSGEWDYLAEYTISVSGGAYFTSSDVGAQLQFPYTGADPDTGYEVSKELRCDIISVTSNTAVVVR 648 (823) Q Consensus 569 y~~~~~~~~~~~~~~~~~~l~~~~~~~v~~~dg~~~~~~~vgg~i~l~~~~~~~~vG~~~~~~~~~~~~~~~~~~~~~~~ 648 (823) |.+....... .++ T Consensus 618 ~~~g~~~~~~---------------------------------~~t---------------------------------- 630 (808) T protein:vir:88 618 IVLGAYNIDT---------------------------------NLT---------------------------------- 630 (808) T ss_pred eccccccCcc---------------------------------ccc---------------------------------- Confidence 8643111000 000 Q ss_pred ecceeeeeeeeeeeecccccceeeecccccccceEEEEeCCceeCCEEE-c--CCEEEec--CCCcEEEECcccceEEEE Q lcl|Aclame:pro 649 ANRNVPPSLRNVATTNWQMARRTFGGLSHLEGQTVNILSDANVEPQKVV-S--GGAVTLE--SPGAVVHIGLPITAEFET 723 (823) Q Consensus 649 ~~~~v~~~~~~~~~~~~g~~~~~~~gl~~l~g~~v~v~~dg~~~~~~~v-~--~g~itl~--~~~~~~~~gl~~~~~~~~ 723 (823) .+. ....+.++.|||++.+.+.+||.++..... . +..++++ .++++|||||+|++++++ T Consensus 631 -------~~~---------~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~~~~~~~~~~~~~v~vGl~y~s~~~~ 694 (808) T protein:vir:88 631 -------SFD---------VRTAYGGTPGPESTFYTIDQQGVLIEHEARDWATNPYISFVGNRAGEQMVIGKQYTFQYEF 694 (808) T ss_pred -------eee---------cccccccccccceeEEEEcCCceEEeeecccccCcceEEeCCCccCceEEEeeeeeEEEEe Confidence 000 001245677999999999999987654322 2 2345555 578999999999999999 Q ss_pred cceecCCC-Cccccc-----ceeEeeEEEEEEccccEEEecCCCceeE---eeccCC--CcCCCCCCcccceEEEEecCC Q lcl|Aclame:pro 724 LDININGQ-ETLLDK-----KQVIPSVTLVVNASRGIWATTPGGKWYE---YPQREF--EFYDDPVDDATGKVEVKLDSN 792 (823) Q Consensus 724 l~~~~~~~-~~~~~~-----~~~i~~~~~~~~~s~~~~~~~~~~~~~~---~~~~~~--~~~~~~~~~~tg~~~~~~~~~ 792 (823) |||++..+ |..+++ ++||+++++++.+|.++.+..+.+..+. .+.++. +.+..+++++||++++.+. + T Consensus 695 ~p~~~~~~~g~~~~~~~~~gr~~l~r~~~~~~~tg~~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~tg~~~vp~~-~ 773 (808) T protein:vir:88 695 SKFLIKQTADDGSTSTEDIGRLQLRRAWLNYEESGAFEINVNNGSSEFVYVMTGGRLGIQRVLGELSVGTGQFKFPVT-G 773 (808) T ss_pred cceEEecCCCCcceeecccceEEEEEEEEEeecccceEEEeCCCcccceeeccCcccCcccccCccccccceEEEEec-c Confidence 99999764 666665 5789999999999999988766544332 232332 3467788999999999875 7 Q ss_pred cCCccEEEEEEcCCCCEEEEEEEEEEEecCC Q lcl|Aclame:pro 793 WGKNGRVKIRQLDPLPLSVLAVIPRLTVGGF 823 (823) Q Consensus 793 ~~~~~~~~i~q~~P~P~tvla~~~~~~~~g~ 823 (823) |+++.+|+|+|++||||+||||..|...|=. T Consensus 774 ~~~~~~v~i~~d~P~P~tilsi~~eg~y~~r 804 (808) T protein:vir:88 774 NAVNQRVTITSSNPNPLNVIGCGWEGNYIRR 804 (808) T ss_pred cCceeEEEEEECCCCceEEEEEEEEEEEecc Confidence 9999999999999999999999999999988 No 16 >protein:vir:6326 Length: 826 # NCBI annotation: tail tubular protein B # Family: family:all:825 # MgeID: mge:132 # MgeName: phiKMV # Cross-refs: genbank:acc:NP_877473;genbank:gi:33300845;uniprot:Q7Y2D1;genbank:GeneID:1482615 Probab=100.00 E-value=3.8e-155 Score=867.16 Aligned_cols=704 Identities=13% Similarity=0.125 Sum_probs=507.5 Q ss_pred Cc-eeeeecccccccccccccccchHHHHHHHHhhhhcceeeecCCceecCcceeeeeecCCCCCceEEEEEE-----CC Q lcl|Aclame:pro 1 MA-ISWIQPSFAGGEIGPSLYGRIDMAKYQVALRKCDNFIVRQYGGVENRPGTRFVGAAKYPNRKCRLIPFQF-----ST 74 (823) Q Consensus 1 M~-~~~~q~sF~~GElsP~l~~r~Dl~ry~~q~~~~~N~~~~~~GGl~rRPGt~fva~~~~~~~~~rLipF~~-----~~ 74 (823) |+ +.+.++||.+| +++|.|++||++||++|+||+++|+|||+||||++||+++++++ +.+++||.+ +. T Consensus 1 M~~i~~s~~n~~~G-----vSqq~d~~r~~~q~~~~~N~~~~~~~G~~rRpg~~~v~~~~~~~-~~~~~~~~~~~~r~~~ 74 (826) T protein:vir:63 1 MSYKQSAYPNLLMG-----VSQQVPFERLPGQLSEQINMVSDPVSGLRRRSGIELMAHLLHTD-QPWPRPFLYHTNLGGR 74 (826) T ss_pred Cceeeeecchhhcc-----eeccCchHhhhhhhhhhhcceeeccCCcccCchhHhhhhhccCC-ccccccEEEEEecCCC Confidence 99 68999999999 89999999999999999999999999999999999999999865 467777766 56 Q ss_pred CCeEEEEEeCCeEEEEECCc-eEeeccccceEEeccccccccceeEEEEeCcEEEEEeCCceEEE----EEEcCCCCcee Q lcl|Aclame:pro 75 VQTYALEFGHQYMRVIKDGA-LVLNSSNVIYEIATPYTEADLFRIKFTQSADVLTLVHPAYPPKE----LRRYAHDNWQL 149 (823) Q Consensus 75 ~~~Y~l~fg~~~irV~~~~g-~v~~t~~~~~~~~tPyt~~~l~~L~~~qsaD~~fIvn~~~~p~~----l~r~~~~~ws~ 149 (823) ++.|+++|++++||||+.++ .++.... +.++++++++.++|+++|+||++||+|++++|+. +.+.++..|.+ T Consensus 75 ~~~~~~~~~~g~irv~~~~~g~~~~~~~---~~~~y~~~~~~~~l~~~t~aD~~fi~n~~~~p~~~~~~~~~~~~~~~~~ 151 (826) T protein:vir:63 75 SIAMLVAQHRGELYLFDERDGRLLMGQP---LVHDYLKANDYRQLRAATVADDLFIANLSVKPEADRTDIKGVDPNKAGW 151 (826) T ss_pred ceEEEEEecCCcEEEEEcCCCeEEEcCC---CCCceeeecCccceEEEEeCCEEEEEeCCeeeeeccccccccCCCCcEE Confidence 77899999999999998644 4332221 1233445666789999999999999999999985 67777888876 Q ss_pred eeEEEecccccc-----ccc---------cceEEEEecccCCce------eeeccccccccccccceEEEcccccc---- Q lcl|Aclame:pro 150 VDVVTKNGPFED-----INI---------DESLTVYASASTGTI------TLTASASIFGAEQVGKLFYLEQPAVD---- 205 (823) Q Consensus 150 ~~~~f~~~p~~~-----i~~---------~~s~t~t~~a~t~~~------Tvtas~~~~~a~~vg~~~~~~~~~~~---- 205 (823) ..+ ..+++.. ++. +.+++.+.....+.. ...++......+..+..+....-... T Consensus 152 ~~v--~~g~Y~~~y~vti~~~~~~~gt~~s~t~t~~t~~~~~a~~~~~~~~~~~s~~yia~~l~~~~~a~~~~~~~~~t~ 229 (826) T protein:vir:63 152 LYI--KAGQYSKAFSMTIKVKDNATGTTYSHTATYVTPDNASTNPNLAEAPFQTSVGYIAWQLYGKFFGAPEYTLPNSTK 229 (826) T ss_pred EEe--eccccCceEEEEEEeccccCCccccceEEEEeccCCcccccccccceeeeeeeeeeeceeeeeeccccccCCCcc Confidence 433 2233211 110 011111111110000 00000000111111111111000000 Q ss_pred --eecceeeee---eeeeee-------------------eEEeccceeeeEe---cccceeecccccC-----ceEE--- Q lcl|Aclame:pro 206 --SVPVWETSK---STSIGD-------------------IRRADSNYYRAVT---AGKTGTLRPSHTE-----GTSW--- 250 (823) Q Consensus 206 --~~~~~~~~~---~~~~~~-------------------~~~~~~~~~~~~~---~~~t~~~~~~~~~-----~~~~--- 250 (823) ....+.... ...... .....+..+.... ..+.....+...+ +..+ T Consensus 230 ~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~ 309 (826) T protein:vir:63 230 KYPKVDPDANAATIAGYLNQRGVQDGYIAFRGDADIHVEVSTDMGNNYGIASGGMSLNATADLPALLPGVGAPGVGVQFM 309 (826) T ss_pred ccceecCCcccceeecceeEecccccEEEEeeCCcccEEEccCCCCcceEEEEEeeccceeeccccCCCcccceEEEeeE Confidence 000000000 000000 0000111111000 0011111111111 1111 Q ss_pred EEeceeccccceEEEEEEecCccEEEEEEecCccccccEEEEeecccc-ccccCcceecccCccc-------CCC----- Q lcl|Aclame:pro 251 DGWGGSGDDDTGIEWEYLHSGFGIARITAVNGTTATAEVISYIPSQVV-GEDNASYKWAKYAWNS-------VNG----- 317 (823) Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~~~~~~~~~~~~~~~~~~-~~~~~t~~~~~~~w~~-------~~g----- 317 (823) ..............|..+.+..|.|+|++.++..... .+||+.++ ...+++|+|+...|++ +|| T Consensus 310 ~~~~~~~g~~~d~~y~~~~~~~~~w~e~~~~~~~~~~---~tmp~~l~~~~~~~~f~~~~~~w~~r~~Gd~~tnp~psf~ 386 (826) T protein:vir:63 310 DGAVMATGSTKAPVYFEWDSANRRWAERAAYGTDWVL---KKMPLALRWDEATDTYSLNELEYDRRGSGDEDTNPTFNFV 386 (826) T ss_pred EeEEecCCCcccceEEEEEcCCceEEEEeecCccccc---ccceEEEEEeccCCeEEEeccccccccccccccCCCcccc Confidence 1111112222233445556778999999987764433 57999887 4578899999999975 345 Q ss_pred --CccEEEEEeceEEEEeCcCCCcEEEEEcccCcccccccc--cCCCCCcEEEEEcCCCceEEEEEeecC-cEEEEecCc Q lcl|Aclame:pro 318 --YPGTVVYYQQRLYFAASTAFPQTIWASRTGDYKDFGKSN--PTQDDDRIIYTYAGRQVNEIRHLIDVG-SLVALTSGG 392 (823) Q Consensus 318 --~Ps~v~f~q~RL~f~~~~~~p~~V~~Sr~gdy~nF~~~t--~~~DdD~I~~~~~~~~~~~i~~~v~~~-~Ll~~t~~~ 392 (823) ||++|+||||||+|++ |++|||||+|||+||++++ +++|||||+++++++++++|+|+++++ +|+|||+++ T Consensus 387 g~~~~~v~f~q~RL~f~~----~~~v~~Srtgd~~nF~~~s~~~~~DdD~I~~~~ss~~~~~i~~~v~~~~~L~l~T~~~ 462 (826) T protein:vir:63 387 TRGITGMTTFQGRLVLLS----QEYVCMSASNNPHRWFKKSAAALNDDDPIEIAAQGSLTEPYEHAVTFNKDLIVFAKKY 462 (826) T ss_pred CCCceEEEEEeceEEEee----CCeEEEEccCCccccccccccCCCCCccEEEEEcCCcceeeEEEeecCCcEEEEecCc Confidence 4566899999999997 4679999999999999998 457999999999999999999999996 799999999 Q ss_pred EEEEecCCCccccccceEEEEeecccC-cccccEEeCCeEEEEecCCC---EEEEEEeecccc-ceeecchHHHHHHhcC Q lcl|Aclame:pro 393 EYVITGDQNKVLTPSSFAFSSQGSNGS-SNVPPIAVANIALFVQEKGS---VVRDLAYSFDVD-GYQGNDLTILANHLFQ 467 (823) Q Consensus 393 q~~l~~~~~~~lTP~~~~i~~~s~~g~-~~~~Pv~vg~~v~f~~~~g~---~v~e~~~~~~~d-~~~~~dlt~~~~hl~~ 467 (823) ||+|+++ ++|||+|++++++|+|++ +.|+|+.+|++++|++++|+ +||||.|+.+.+ .|++.|||+|++|||+ T Consensus 463 q~~ls~~--~~lTP~~~~i~~~s~~~~~~~~~Pv~vG~~v~Fv~~~g~~~s~v~e~~~~~d~~~~y~~~dlt~~~~~l~~ 540 (826) T protein:vir:63 463 QAVVPGG--GIVTPRTAVISITTQYDLDTRAAPAVTGRSVYFAAERALGFMGLHEMAPSPSTDSHYVAEDVTSHIPSYMP 540 (826) T ss_pred EEEEeCC--CcccceeEEEEEEEeecccCCCCceEeCCeEEEEecCCCceeEEEEEEeeeccccceehhHHHHHHHHhcC Confidence 9999864 699999999999999976 46999999999999999874 899999997766 5999999999999999 Q ss_pred CCceEEEEEcCCCcEEEEEEeCCCeEEEEEEe---ccccceeEEeeccCCceEEEEEEecCCCCEEEEEEEecCCCcEEE Q lcl|Aclame:pro 468 KHSIVDWCFSIVPYSSAFCIRDDGKLLVMTYL---RDQQVFAWAPQSSTGKYESTCSISEGNEDAVYFVVNRTVNGQTVR 544 (823) Q Consensus 468 ~~~~~~~a~~~~p~~~~~~~~~dg~l~~~ty~---~~q~v~aW~~w~~~g~~~~~~~~~~~~~d~l~~~v~r~~~g~~~~ 544 (823) + .+..|++|++|++++|++++||+|++|+|+ +||+|+|||||+|+|+|+++|++ +|+||++|+|++++...| T Consensus 541 ~-~v~~~a~s~~~~~v~~~~~~dg~l~~~~y~~~~~e~~v~aW~~~~~~g~v~~~~~i----~d~l~~iv~r~~~~~~~r 615 (826) T protein:vir:63 541 G-PAEYIQAAASSGYLVFGTSTADEMICHQYLWQGNEKVQNAFHRWTLRHQIIGAYFT----GDNLMVLIQKGQEIALGR 615 (826) T ss_pred C-CeEEEEEcCCCCEEEEEEcCCCEEEEEEEeeCCCcEEEEeEEEEecCCcEEEEEEE----CCeEEEEEEeCCCEEEEE Confidence 6 699999999999999999999999999997 88999999999999999999998 689999999999987666 Q ss_pred E-EEeecccc---CCcccceeEeeeeeEEeccccceeeeEeeccccCcCccCcceEEecCCeEEcccccccEEEecccCc Q lcl|Aclame:pro 545 Y-IERLSSRL---FTSDEDAFFVDSGLSYDGRNTSDRTMTITGGSGEWDYLAEYTISVSGGAYFTSSDVGAQLQFPYTGA 620 (823) Q Consensus 545 ~-~e~~~~~~---~~~~~~~~~lD~~~~y~~~~~~~~~~~~~~~~~~l~~~~~~~v~~~dg~~~~~~~vgg~i~l~~~~~ 620 (823) + ||+|+... +...++++++||++.+.+..... T Consensus 616 ~~~e~~~~~~~~~~~~~d~~~~~d~~~~~~~~~~~~-------------------------------------------- 651 (826) T protein:vir:63 616 MHLNSLPAREGLQYPKYDYWRRIEATVAGELELTKQ-------------------------------------------- 651 (826) T ss_pred EEEEecCCccccccCCccceEEEEEeeeeeeccCcc-------------------------------------------- Confidence 5 99987543 45566788889886654321000 Q ss_pred eeEeeeEEEEEEEEeeEEecCCCceeeEecceeeeeeeeeeeecccccceeeecccccccceEEEEeCCceeCC----EE Q lcl|Aclame:pro 621 DPDTGYEVSKELRCDIISVTSNTAVVVRANRNVPPSLRNVATTNWQMARRTFGGLSHLEGQTVNILSDANVEPQ----KV 696 (823) Q Consensus 621 ~~~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~g~~~~~~~gl~~l~g~~v~v~~dg~~~~~----~~ 696 (823) .+ -.+++|+++..+.+++|+.+++. .+ T Consensus 652 -----------------------------------~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 682 (826) T protein:vir:63 652 -----------------------------------HW--------------DLIKDASAVYQLQPVAGAYMERTHLGVKR 682 (826) T ss_pred -----------------------------------ee--------------ecccCcccccEEEEeeCccccCCccceEE Confidence 00 02588999999999999998764 46 Q ss_pred EcCCEEEecCC----CcEEEECcccceEEEEcceecCCC-Cccccc-ceeEeeEEEEEEccccEEEecCCCce-----eE Q lcl|Aclame:pro 697 VSGGAVTLESP----GAVVHIGLPITAEFETLDININGQ-ETLLDK-KQVIPSVTLVVNASRGIWATTPGGKW-----YE 765 (823) Q Consensus 697 v~~g~itl~~~----~~~~~~gl~~~~~~~~l~~~~~~~-~~~~~~-~~~i~~~~~~~~~s~~~~~~~~~~~~-----~~ 765 (823) +.+|.++|+.+ +.+++|||+|+++++++||+++.+ |..+++ ++||+++++++.+|.++.+....+.. +. T Consensus 683 ~~~g~v~l~~~~~~~~~~v~VGl~y~s~~~~~~~~~~~~~g~~~~~gr~~l~r~~~~~~~tg~~~v~v~~~~~~~~~~~~ 762 (826) T protein:vir:63 683 ETNTKVFLDVPEAVVGAVYVVGCEFWSKVEFTPPVLRDHNGLPMTSTRAVLHRYNVNFGWTGEFLWRISDTARPNQPWYD 762 (826) T ss_pred ecCCEEEEecCCCccccEEEEeeeeeEEEEecceEEEccCCCcceeccEEEEEEEEEeeccccEEEEecCccccceeEee Confidence 67899998644 678999999999999999998743 444433 57899999999999999988654332 22 Q ss_pred eeccCC---CcCCCCCCcccceEEEEecCCcCCccEEEEEEcCCCCEEEEEEEEEEEecCC Q lcl|Aclame:pro 766 YPQREF---EFYDDPVDDATGKVEVKLDSNWGKNGRVKIRQLDPLPLSVLAVIPRLTVGGF 823 (823) Q Consensus 766 ~~~~~~---~~~~~~~~~~tg~~~~~~~~~~~~~~~~~i~q~~P~P~tvla~~~~~~~~g~ 823 (823) .+-+.. +....+|.+.+|.+++.+ .+++.+.+|+|+|++|+||+||+|..+...|=+ T Consensus 763 ~~~~~~~~~~~~~g~p~~~t~~~~vP~-~~~~~~~~i~i~~d~P~p~~il~i~~~~~yn~r 822 (826) T protein:vir:63 763 TTPLRLFSRQLNAGEPLVDSAVVPLPA-RVDMATSKFELSCHSPYDMNVRAVEYNFKSNQT 822 (826) T ss_pred cCCceecccccccccccccceEEEEEE-eeccceEEEEEEeCCCCcEEEEEEEEEEEEece Confidence 211111 223445667799999887 468999999999999999999999999999998 No 17 >protein:vir:7021 Length: 803 # NCBI annotation: tail protein # Family: family:all:825 # MgeID: mge:141 # MgeName: SP6 # Cross-refs: genbank:acc:NP_853594;genbank:gi:31711676;genbank:GeneID:1481802 Probab=100.00 E-value=2.2e-155 Score=868.50 Aligned_cols=722 Identities=13% Similarity=0.083 Sum_probs=506.1 Q ss_pred CceeeeecccccccccccccccchHHHHHHHHhhhhcceeeecCCceecCcceeeeeecCCCCCceEEEEEEC----CCC Q lcl|Aclame:pro 1 MAISWIQPSFAGGEIGPSLYGRIDMAKYQVALRKCDNFIVRQYGGVENRPGTRFVGAAKYPNRKCRLIPFQFS----TVQ 76 (823) Q Consensus 1 M~~~~~q~sF~~GElsP~l~~r~Dl~ry~~q~~~~~N~~~~~~GGl~rRPGt~fva~~~~~~~~~rLipF~~~----~~~ 76 (823) |.+.+..+||.+| +++|+|++||++||++|+||+++|+|||+||||++||+++++.++..+|+||.+. ++| T Consensus 1 ~~v~~s~~nl~~G-----vSqQ~d~~R~~~q~~~~~N~~~~~~gGl~rRpGt~~va~l~~~~~~~~~~~~~~~~~~~~e~ 75 (803) T protein:vir:70 1 MEVQGSLGRQIQG-----ISQQPPAVRLDGQCSEMVNMVPDVVEGTKSRMGTTHIAKLLEYGEDDMAVHHYRRGGEGEEE 75 (803) T ss_pred CeEEeecchhccc-----cccCchHHhhhhhhhhhhcceeeeccccccCChhhhhhhhcCCCcccceeeEEEecCCCceE Confidence 9999999999999 9999999999999999999999999999999999999999998889999987653 457 Q ss_pred eEEEEEeCCeEEEEECCce-EeeccccceEEeccccccccceeEEEEeCcEEEEEeCCceEEEEEEcCCCCceeeeEEEe Q lcl|Aclame:pro 77 TYALEFGHQYMRVIKDGAL-VLNSSNVIYEIATPYTEADLFRIKFTQSADVLTLVHPAYPPKELRRYAHDNWQLVDVVTK 155 (823) Q Consensus 77 ~Y~l~fg~~~irV~~~~g~-v~~t~~~~~~~~tPyt~~~l~~L~~~qsaD~~fIvn~~~~p~~l~r~~~~~ws~~~~~f~ 155 (823) .|+++|++++||||+++|. ++.+...++....|++.+++++|+++|+||++||+|++++|+...+.....+....+... T Consensus 76 ~~~~~~~~~~irv~~~~G~~~~v~~~~~~~~~l~~~~~~~~~l~~~tvaD~~fi~n~~~~~~~~~~~~~~~~~~~~~~vr 155 (803) T protein:vir:70 76 YFFIMKKGQVPEIFDKQGRKCMVQSQDAPMTYLSEVTNPREDVQFMTIADVTFMLNRKKIVKARPERSPQVGSTAIVFMA 155 (803) T ss_pred EEEEEecCCeEEEEEcCCcEEEEecCCceeEEEeecCCChhheeEEEEcCEEEEecCceeeeeccccCCCCCCceEEEEe Confidence 8999999999999997665 444555556556677778889999999999999999999998766555444444333333 Q ss_pred ccccc-----cccccceEEEEecccCCceeee------------------ccccccccccccceEEEcccccceecceee Q lcl|Aclame:pro 156 NGPFE-----DINIDESLTVYASASTGTITLT------------------ASASIFGAEQVGKLFYLEQPAVDSVPVWET 212 (823) Q Consensus 156 ~~p~~-----~i~~~~s~t~t~~a~t~~~Tvt------------------as~~~~~a~~vg~~~~~~~~~~~~~~~~~~ 212 (823) .+++. .++....++.+........... .+.+.|.....|..+++..........+.+ T Consensus 156 ~g~y~~~y~itIng~~~a~~~t~~~~~~~~~~~~~~~~ia~~l~~~~~~~~s~a~~~~~~~g~~~~i~~~~~~~~~~~~t 235 (803) T protein:vir:70 156 YGQYGTHYKIIIDGVVAAGYKTRDGAEAHHIEDIRTESIAYNLYQSLQSWDKIADYEIQLDGTSIYITRRDGSTTFDITT 235 (803) T ss_pred ecCCcceEEEEeCCcceEEEEeCCCcccccccccchhhhhhhhhhheeccccccceEEEECCcEEEEEEcCCCCeeEEEe Confidence 33321 2222222222222111110000 001112223333333333322221111111 Q ss_pred eeeeeeeeeEEeccceeeeEe-cccc-eeecccccCceEEE--EeceeccccceEEEEEEecCccEEEEEEecCcccccc Q lcl|Aclame:pro 213 SKSTSIGDIRRADSNYYRAVT-AGKT-GTLRPSHTEGTSWD--GWGGSGDDDTGIEWEYLHSGFGIARITAVNGTTATAE 288 (823) Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~-~~~t-~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~~~~~~~~ 288 (823) .... ....+..+. ..++ ..+...+.++.... ..+....+..++.+.....+.+.|.+++.++... .. T Consensus 236 ~~g~--------~~~~~~~~~~~v~~~~~Lp~~~~~g~~v~v~~~g~~~~d~y~v~~~~~~~~~~~w~e~a~~g~~~-~~ 306 (803) T protein:vir:70 236 EDGA--------KGKDLVAIKYKVASTDLLPSRAPEGYKVQVWPTGSKPESRYWLQAEKQNGNIVSWKETLAADVLI-GF 306 (803) T ss_pred ecCc--------CCcEEEEEEecccceeeccccCCCCceEEEEcCCCCCCceeeEEEEeccCCccceEeeeccceee-ee Confidence 1000 111111111 1111 12222233332221 1122222334445555555667899987766543 23 Q ss_pred EEEEeeccccccc----cCcceecccCccc------------------CCCCccEEEEEeceEEEEeCcCCCcEEEEEcc Q lcl|Aclame:pro 289 VISYIPSQVVGED----NASYKWAKYAWNS------------------VNGYPGTVVYYQQRLYFAASTAFPQTIWASRT 346 (823) Q Consensus 289 ~~~~~~~~~~~~~----~~t~~~~~~~w~~------------------~~g~Ps~v~f~q~RL~f~~~~~~p~~V~~Sr~ 346 (823) ...+||+.+++.. .+++.+....|.. ..+||++|+||||||+|++ |++|||||+ T Consensus 307 ~~~t~p~~~v~~~~~~~~~~~~~~~~~~~~r~~gdd~tnp~psf~~~~~~~~~~~v~f~q~RL~f~~----~~~v~~Srt 382 (803) T protein:vir:70 307 DKSTMPYIIERTGFVNGIAQFKIRQGDWEDRKVGDDLTNPMPSFIDEEVPQTLGGMFMVQNRLCVTA----GEAVIATRT 382 (803) T ss_pred ecccccEEEEEEEEeecceeEEEEeeccccccccccccCccccccCccCCCCceeEEEEeceEEEee----CCeEEEEcc Confidence 4456787776532 3556666666642 2356888999999999998 578999999 Q ss_pred cCcccccccc--cCCCCCcEEEEEcCCCceEEEEEeecC-cEEEEecCcEEEEecCCCccccccceEEEEeecccCc-cc Q lcl|Aclame:pro 347 GDYKDFGKSN--PTQDDDRIIYTYAGRQVNEIRHLIDVG-SLVALTSGGEYVITGDQNKVLTPSSFAFSSQGSNGSS-NV 422 (823) Q Consensus 347 gdy~nF~~~t--~~~DdD~I~~~~~~~~~~~i~~~v~~~-~Ll~~t~~~q~~l~~~~~~~lTP~~~~i~~~s~~g~~-~~ 422 (823) ||||||++++ +++|||||+++++++++++|+|+++++ +|+|||+++||+|+++ ++|||+|++++++|+|+|+ .+ T Consensus 383 gd~~nF~~~t~~~~~DdD~I~~~~ss~~~~~i~~~v~~~~~L~i~T~~~q~~l~g~--~~lTP~~~~i~~~s~~~~~~~~ 460 (803) T protein:vir:70 383 SYFFDFFRYTAVSAVATDPFDVFSDASEVYQLKHAVTLDGSTVLFADKSQFILPGD--KPLEKSNVLLKPVTTFEVNNNV 460 (803) T ss_pred CCccccccccccCCCCCccEEEEecCCcceeeEEEeecCCcEEEEecCcEEEEeCC--CcccceeEEEEEEEEeeccCCC Confidence 9999999997 457999999999999999999999995 8999999999999974 5999999999999999875 69 Q ss_pred ccEEeCCeEEEEecCCC--EEEEEEeeccccceeecchHHHHHHhcCCCceEEEEEcCCCcEEE-EEEeCCCeEEEEEEe Q lcl|Aclame:pro 423 PPIAVANIALFVQEKGS--VVRDLAYSFDVDGYQGNDLTILANHLFQKHSIVDWCFSIVPYSSA-FCIRDDGKLLVMTYL 499 (823) Q Consensus 423 ~Pv~vg~~v~f~~~~g~--~v~e~~~~~~~d~~~~~dlt~~~~hl~~~~~~~~~a~~~~p~~~~-~~~~~dg~l~~~ty~ 499 (823) +|+.+|++++|++++|+ +||||.|++++|+|++.|||+|++|||++ .+..+++++.|+.++ |+..++++||+|+|+ T Consensus 461 ~Pv~vg~~v~fv~~~g~~s~vre~~~~~~~d~y~a~Dlt~~a~hl~~~-~v~~~~~~~~~~~~v~~~~~~~~~l~~~~yl 539 (803) T protein:vir:70 461 KPVATGESVMFATSEGAYSGIREFYTDSYSDTKKAQAITSHVNKLLEG-NVIMMSASTNVNRLLVLTDKYRNIIYCYDWL 539 (803) T ss_pred ccEEeCCeEEEeccCCCeeEEEEEeccccccceehhhhhhhhHhhcCC-ceEEEEEeCCCCeEEEEEEcCCCeEEEEEEE Confidence 99999999999999995 69999999999999999999999999997 566777777777655 555678999999997 Q ss_pred ---ccccceeEEeeccCCceEEEEEEecCCCCEEEEEEEecCCCcEEEEEEeeccccC--CcccceeEeeeeeEEecccc Q lcl|Aclame:pro 500 ---RDQQVFAWAPQSSTGKYESTCSISEGNEDAVYFVVNRTVNGQTVRYIERLSSRLF--TSDEDAFFVDSGLSYDGRNT 574 (823) Q Consensus 500 ---~~q~v~aW~~w~~~g~~~~~~~~~~~~~d~l~~~v~r~~~g~~~~~~e~~~~~~~--~~~~~~~~lD~~~~y~~~~~ 574 (823) +||+|+|||||+|+|.++++|+++ .+|++||+|+|+++| +|||||+.... ...++++||||+.+|.+... T Consensus 540 ~~~~e~~v~aW~r~~~~g~~~~~~~~~--~~d~l~~vv~r~~~g---~~ier~~~~~~~~~~~~~~~~lD~~~~~~~~~~ 614 (803) T protein:vir:70 540 WQGTERVQAAWHKWEWPLGTFIRGMFY--SGEHLYLLIERGSTG---VYLERMDMGDALVYNLNDRIRMDRQAELIFRHI 614 (803) T ss_pred ecCCcEEEEeEEEEEcCCCEEEEEEEe--cCCEEEEEEEECCCe---EEEEEEecccccccCCcceeEeccceeEeeccc Confidence 889999999999999999999987 478999999998876 58999986643 45678999999999876532 Q ss_pred ceeeeEeeccccCcCccCcceEEecCCeEEcccccccEEEecccCceeEeeeEEEEEEEEeeEEecCCCceeeEecceee Q lcl|Aclame:pro 575 SDRTMTITGGSGEWDYLAEYTISVSGGAYFTSSDVGAQLQFPYTGADPDTGYEVSKELRCDIISVTSNTAVVVRANRNVP 654 (823) Q Consensus 575 ~~~~~~~~~~~~~l~~~~~~~v~~~dg~~~~~~~vgg~i~l~~~~~~~~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 654 (823) ....... .+.|+.+.+- +.+ T Consensus 615 ~~~~~~~-----~~~~~~~~~~------------~~~------------------------------------------- 634 (803) T protein:vir:70 615 KAEDVWV-----SEPLPWQPTD------------VTL------------------------------------------- 634 (803) T ss_pred cCCceee-----eecccccCcc------------cce------------------------------------------- Confidence 2111000 0112111110 000 Q ss_pred eeeeeeeeecccccceeeecccccccceEEEE-eCCceeCCEEEcCCEEEecCCCcEEEECcccceEEEEcceecCCC-C Q lcl|Aclame:pro 655 PSLRNVATTNWQMARRTFGGLSHLEGQTVNIL-SDANVEPQKVVSGGAVTLESPGAVVHIGLPITAEFETLDININGQ-E 732 (823) Q Consensus 655 ~~~~~~~~~~~g~~~~~~~gl~~l~g~~v~v~-~dg~~~~~~~v~~g~itl~~~~~~~~~gl~~~~~~~~l~~~~~~~-~ 732 (823) +.. ....+..++.+.++... .+|. ....+..|.++++.++.+++|||+|+++++++||.+..+ | T Consensus 635 --l~~----------~~~~~~~~~~~~~~~~~~~~g~--~t~~~~~~~~~~~~~a~~v~VGl~Y~~~~~~~~~~i~~~~~ 700 (803) T protein:vir:70 635 --LDC----------VLIDGWDSYIGGSFLFSYNPGD--NTLTTTFDMHDDDHVKAKVVVGQLYPQEFEPTQVVIRDNQE 700 (803) T ss_pred --eeE----------EEeeeeeeecCCeEEEEEcCCC--ccceeeeeEECCCCcccEEEEeeeeeEEEeecceEEEcCCC Confidence 000 00011112222222221 1221 233455688999999999999999999999999998643 3 Q ss_pred -cccccceeEeeEEEEEEccccEEEec--CCCceeEeeccCC------CcCCCCCCcccceEEEEecCCcCCccEEEEEE Q lcl|Aclame:pro 733 -TLLDKKQVIPSVTLVVNASRGIWATT--PGGKWYEYPQREF------EFYDDPVDDATGKVEVKLDSNWGKNGRVKIRQ 803 (823) Q Consensus 733 -~~~~~~~~i~~~~~~~~~s~~~~~~~--~~~~~~~~~~~~~------~~~~~~~~~~tg~~~~~~~~~~~~~~~~~i~q 803 (823) +....++||++++|++++|.++.+.. ......+...+.. ++....++++||++++.+ .+|+++.+|+|+| T Consensus 701 ~~~~~~~~rl~r~~~~~~~sg~~~v~v~~~~~~~~~~~~~s~~~~g~~~~~~g~~~~~tg~~~vP~-~~~~~~~~v~i~~ 779 (803) T protein:vir:70 701 RVSYIDVPTVGLVHLNLDKYPDFKVEVKNLKSGKVRNVLASNRVGGAINNIVGYVEPREGVFKFPL-RSLSTDTVYRVMV 779 (803) T ss_pred ccccccccEEEEEEEEeecccceEEEEecCCccccceeeccchhccccccccCccccccceEEEEe-eccCcceEEEEEE Confidence 44456779999999999997776643 2222222222211 122334679999999987 6899999999999 Q ss_pred cCCCCEEEEEEEEEEEecCC Q lcl|Aclame:pro 804 LDPLPLSVLAVIPRLTVGGF 823 (823) Q Consensus 804 ~~P~P~tvla~~~~~~~~g~ 823 (823) ++||||+||||..|...|=. T Consensus 780 d~P~P~tvlsi~weg~y~~r 799 (803) T protein:vir:70 780 ESPHTFQLRDIEWEGSYNPT 799 (803) T ss_pred CCCCCeEEEEEEEEEEEecc Confidence 99999999999999999888 No 18 >protein:vir:97014 Length: 800 # NCBI annotation: 33 # Family: family:all:825 # MgeID: mge:1644 # MgeName: K1-5 # Cross-refs: genbank:acc:YP_654134;genbank:gi:108862018;genbank:GeneID:5075963 Probab=100.00 E-value=7.2e-155 Score=865.64 Aligned_cols=720 Identities=14% Similarity=0.065 Sum_probs=515.5 Q ss_pred CceeeeecccccccccccccccchHHHHHHHHhhhhcceeeecCCceecCcceeeeeecCCCCCceEEEEEEC---CCCe Q lcl|Aclame:pro 1 MAISWIQPSFAGGEIGPSLYGRIDMAKYQVALRKCDNFIVRQYGGVENRPGTRFVGAAKYPNRKCRLIPFQFS---TVQT 77 (823) Q Consensus 1 M~~~~~q~sF~~GElsP~l~~r~Dl~ry~~q~~~~~N~~~~~~GGl~rRPGt~fva~~~~~~~~~rLipF~~~---~~~~ 77 (823) |.+.+..+||.+| +++|+|++||++||++|+||+|+|+|||+||||++||+++++++..++|+||.++ .+|. T Consensus 1 ~~v~~s~~n~~~G-----vSqq~d~~R~~~q~~~~~N~~~~~~gGl~rRpGt~fva~l~~~~~~~~~~~~~~~~d~~eq~ 75 (800) T protein:vir:97 1 MEVQGSLGRQIQG-----ISQQPPAVRLDGQCTAMVNMIPDVVNGTQSRMGTTHIAKILDAGTDDMATHHYRRGDGDEEY 75 (800) T ss_pred CeeEeechhhhcc-----cccCchhHhhhhhhhhhhcceeccccccccCCchhhheeecCCCcccceeEEEEEcCCceEE Confidence 9999999999999 9999999999999999999999999999999999999999999999999998774 4567 Q ss_pred EEEEEeCCeEEEEECCceEe-eccccceEEeccccccccceeEEEEeCcEEEEEeCCceEEEEEEcC--CCCceeeeEEE Q lcl|Aclame:pro 78 YALEFGHQYMRVIKDGALVL-NSSNVIYEIATPYTEADLFRIKFTQSADVLTLVHPAYPPKELRRYA--HDNWQLVDVVT 154 (823) Q Consensus 78 Y~l~fg~~~irV~~~~g~v~-~t~~~~~~~~tPyt~~~l~~L~~~qsaD~~fIvn~~~~p~~l~r~~--~~~ws~~~~~f 154 (823) |+++|+++++|||+++|..+ .+....++...+++.+++++|+++|+||++||+|++++|+...+.. +.+|.+.. . T Consensus 76 ~v~~~~~~~~rv~~~~G~~~~v~~~~~~~~y~~~~~~~~~~l~~~tvaD~~fi~n~~~~~~~~~~~~~~~~~~~~~~--v 153 (800) T protein:vir:97 76 FFTLKKGQVPEIFDKYGRKCNVTSQDAPMTYLSEVVNPREDVQFMTIADVTFMLNRRKVVKASSRKSPKVGNKAIVF--C 153 (800) T ss_pred EEEEEcCCEEEEEecCCcEEEEecCCcceEEEeccCCCccceeEEEEcCEEEEeeCceecccccccccCCCcceEEE--E Confidence 89999999999999988643 2334344444456677889999999999999999999999877653 44554433 2 Q ss_pred ecccc-----ccccccceEEEEecccCCcee-eeccc-----------------cccccccccceEEEcccccceeccee Q lcl|Aclame:pro 155 KNGPF-----EDINIDESLTVYASASTGTIT-LTASA-----------------SIFGAEQVGKLFYLEQPAVDSVPVWE 211 (823) Q Consensus 155 ~~~p~-----~~i~~~~s~t~t~~a~t~~~T-vtas~-----------------~~~~a~~vg~~~~~~~~~~~~~~~~~ 211 (823) ..+++ ..++.+.+.+.+..+.+.... ...+. +.+.....|..+++........ T Consensus 154 ~~g~y~~~y~i~I~~~~~~~~~t~~~t~~~~~~~~~~~~ia~ql~~~~~~~~~~~~~t~~~~G~~~~i~~~~~~~~---- 229 (800) T protein:vir:97 154 AYGQYGTSYSIVINGANAASFKTPDGGSADHVEQIRTERITSELYSKLQQWSGVSDYEIQRDGTSIFIERRDGASF---- 229 (800) T ss_pred eecccceeeeeccCCcceEEEEEcCCCCcccceeccHHHHHHHHHHhhhccccccceEEEeCCcEEEEEEcCCceE---- Confidence 33333 245555555544433322221 11111 1122222333333322111100 Q ss_pred eeeeeeeeeeEEeccceeeeEec-ccc-eeecccccCceE--EEEeceeccccceEEEEEEecCccEEEEEEecCccccc Q lcl|Aclame:pro 212 TSKSTSIGDIRRADSNYYRAVTA-GKT-GTLRPSHTEGTS--WDGWGGSGDDDTGIEWEYLHSGFGIARITAVNGTTATA 287 (823) Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~-~~t-~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~~~~~~~ 287 (823) .+.......+..+..+.. .++ ..+...+..+.. +...+....++.+..+.....+.+.|++++..+.... T Consensus 230 -----~v~t~~g~~~~~~~~~~~~v~~~~~lp~~~~~g~~v~i~~~~~~~~~~y~~~~~~~~~~~~~w~e~~~~~~~~~- 303 (800) T protein:vir:97 230 -----TITTTDGAKGKDLVAIKNKVSSTDLLPSRAPAGYKVQVWPTGSKPESRYWLQAEPKEGNLVSWKETIAADVLLG- 303 (800) T ss_pred -----EEEecCCcCceeeeEEeeeccchhhchhhCCCCcEEEEEccCCCCCceEEEEEEecccCcceEEEeeccccccc- Confidence 000000001111111110 111 112222222222 1112222233334444444456789999987776543 Q ss_pred cEEEEeecccccc----ccCcceecccCcccC-------C-----------CCccEEEEEeceEEEEeCcCCCcEEEEEc Q lcl|Aclame:pro 288 EVISYIPSQVVGE----DNASYKWAKYAWNSV-------N-----------GYPGTVVYYQQRLYFAASTAFPQTIWASR 345 (823) Q Consensus 288 ~~~~~~~~~~~~~----~~~t~~~~~~~w~~~-------~-----------g~Ps~v~f~q~RL~f~~~~~~p~~V~~Sr 345 (823) ....+||+.+++. ..+++.++...|.++ | +||++|+||||||+|++ |++||||| T Consensus 304 ~~~~tmp~~~~~~~~~~~~g~~~~~~~~w~~r~~gd~~tnp~p~f~~~~~~~~~~~v~f~q~RL~f~~----~~~v~~Sr 379 (800) T protein:vir:97 304 FDKGTMPYIIERTDIINGIAQFKIRQGDWEDRKVGDDLTNPMPSFIDEEVPQTIGGMFMVQNRLCFTA----GEAVIASR 379 (800) T ss_pred eecccceEEEEEeecccccceeEEEeccccccccCccccCccccccCCcCCCCceeEEEEeeeEEEec----CCeEEEEe Confidence 3446688888775 577888888888642 3 46888999999999997 56899999 Q ss_pred ccCccccccccc--CCCCCcEEEEEcCCCceEEEEEeecC-cEEEEecCcEEEEecCCCccccccceEEEEeecccCc-c Q lcl|Aclame:pro 346 TGDYKDFGKSNP--TQDDDRIIYTYAGRQVNEIRHLIDVG-SLVALTSGGEYVITGDQNKVLTPSSFAFSSQGSNGSS-N 421 (823) Q Consensus 346 ~gdy~nF~~~t~--~~DdD~I~~~~~~~~~~~i~~~v~~~-~Ll~~t~~~q~~l~~~~~~~lTP~~~~i~~~s~~g~~-~ 421 (823) +||||||+++++ ++|||||+++++++++++|+|+++++ +|+|||+++||+|+++ ++|||+|++++++|+|+|+ . T Consensus 380 tgd~~nF~~~t~~~~~DdD~I~~~~ss~~v~~i~~~v~~~~~L~i~T~~~q~~ls~~--~~lTP~~~~~~~~s~~~~~~~ 457 (800) T protein:vir:97 380 TSYFFDFFRYTVISALATDPFDIFSDASEVYQLKHAVTLDGATVLFSDKSQFILPGD--KPLEKSNALLKPVTTFEVNNK 457 (800) T ss_pred cCCccccccccccCCCCCccEEEEecCCcceeeeEEeecCCcEEEEecCcEEEEeCC--CcccceeEEEEEEEeeeccCC Confidence 999999999985 46999999999999999999999996 7999999999999974 6999999999999999775 6 Q ss_pred cccEEeCCeEEEEecCCC--EEEEEEeeccccceeecchHHHHHHhcCCCceEEEEEcCCCcEEEEEEeCCCeEEEEEEe Q lcl|Aclame:pro 422 VPPIAVANIALFVQEKGS--VVRDLAYSFDVDGYQGNDLTILANHLFQKHSIVDWCFSIVPYSSAFCIRDDGKLLVMTYL 499 (823) Q Consensus 422 ~~Pv~vg~~v~f~~~~g~--~v~e~~~~~~~d~~~~~dlt~~~~hl~~~~~~~~~a~~~~p~~~~~~~~~dg~l~~~ty~ 499 (823) ++|+.+|++++|++++|+ +||||.|++++|+|++.|||+|++|||++..+..++++++|..++|+.+++|+|++|+|+ T Consensus 458 ~~Pv~vG~~v~fv~~~g~~s~vre~~~~~~~d~~~a~DlT~~~~hl~~~~v~~~~~~~~~~~~v~~~~~~~~~l~~~~y~ 537 (800) T protein:vir:97 458 VKPVVTGESVMFATNDGSYSGVREFYTDSYSDTKKAQAITSHVNKLIEGNITNMAASTNVNRLLVTTDKYRNIIYCYDWL 537 (800) T ss_pred CCcEEeCCeEEEeeCCCCeeEEEEEeeeecccceehhhHHHHHHHhcCCceEEEEEeCCCCeEEEEEEcCCCEEEEEEEe Confidence 999999999999999995 699999999999999999999999999985555555555666788999999999999998 Q ss_pred ---ccccceeEEeeccCCceEEEEEEecCCCCEEEEEEEecCCCcEEEEEEeeccccC--CcccceeEeeeeeEEecccc Q lcl|Aclame:pro 500 ---RDQQVFAWAPQSSTGKYESTCSISEGNEDAVYFVVNRTVNGQTVRYIERLSSRLF--TSDEDAFFVDSGLSYDGRNT 574 (823) Q Consensus 500 ---~~q~v~aW~~w~~~g~~~~~~~~~~~~~d~l~~~v~r~~~g~~~~~~e~~~~~~~--~~~~~~~~lD~~~~y~~~~~ 574 (823) +||+++|||||++++.....|+.+ .+|+||++|+|+.+ +|||||+.... ...+++++||+.....+. T Consensus 538 ~~~~e~~~~aW~~~~~~~~~~~~~~~~--~~d~l~~vv~r~~~----~~ler~~~~~~~~~~~~~~~~lD~~~~~~~~-- 609 (800) T protein:vir:97 538 WQGTDRVQSAWHVWKWPIGTKVRGMFY--SGELLYLLLERGDG----VYLEKMDMGDALTYGLNDRIRMDRQAELVFK-- 609 (800) T ss_pred ecCCceEEEeEEEEecCCCeEEEEEEE--cCCeEEEEEEcCCc----EEEEEEecccCcCcccccceeccccceeeee-- Confidence 477889999999986433333222 36999999999754 89999985442 345567788854222110 Q ss_pred ceeeeEeeccccCcCccCcceEEecCCeEEcccccccEEEecccCceeEeeeEEEEEEEEeeEEecCCCceeeEecceee Q lcl|Aclame:pro 575 SDRTMTITGGSGEWDYLAEYTISVSGGAYFTSSDVGAQLQFPYTGADPDTGYEVSKELRCDIISVTSNTAVVVRANRNVP 654 (823) Q Consensus 575 ~~~~~~~~~~~~~l~~~~~~~v~~~dg~~~~~~~vgg~i~l~~~~~~~~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 654 (823) |.. ..+..+ . .++.| ... T Consensus 610 ---------------~~~-----~~~~~v------~-------------~~~~~-----------~~~------------ 627 (800) T protein:vir:97 610 ---------------HFK-----AEDEWV------S-------------EPLPW-----------VPT------------ 627 (800) T ss_pred ---------------eee-----cccceE------e-------------ccccc-----------cCC------------ Confidence 100 000000 0 00000 000 Q ss_pred eeeeeeeeecccccceeeecccccccceEEEEeCCceeCCEEEcCCEEEecCCCcEEEECcccceEEEEcceecCCC-C- Q lcl|Aclame:pro 655 PSLRNVATTNWQMARRTFGGLSHLEGQTVNILSDANVEPQKVVSGGAVTLESPGAVVHIGLPITAEFETLDININGQ-E- 732 (823) Q Consensus 655 ~~~~~~~~~~~g~~~~~~~gl~~l~g~~v~v~~dg~~~~~~~v~~g~itl~~~~~~~~~gl~~~~~~~~l~~~~~~~-~- 732 (823) ..-......+.||+|++|++|.+ .++.+.+...+..+.++++.++++|||||+|+++++++||.++.+ | T Consensus 628 --------~~~~~~~~~v~g~~~~~G~~v~~-~~~~~~~~~~~~~~~~~~~~~~~~v~vGl~Y~~~~~~~p~~i~~~~g~ 698 (800) T protein:vir:97 628 --------NPELLDCILIEGWDSYIGGSFLF-KYNPSDNTLSTTFDMYDDSHVKAKVIVGQIYPQEFEPTPVVIRDNQDR 698 (800) T ss_pred --------CcceeEEEEecccccccCceEEE-EecCccCcccccceEEeCCCCCcEEEEeeeeeEEEEecceEEEecCCC Confidence 00001134467899999999964 567777888888999999999999999999999999999988642 3 Q ss_pred cccccceeEeeEEEEEEccccEEEecCCC---ceeEeec---cCCCc--CCCCCCcccceEEEEecCCcCCccEEEEEEc Q lcl|Aclame:pro 733 TLLDKKQVIPSVTLVVNASRGIWATTPGG---KWYEYPQ---REFEF--YDDPVDDATGKVEVKLDSNWGKNGRVKIRQL 804 (823) Q Consensus 733 ~~~~~~~~i~~~~~~~~~s~~~~~~~~~~---~~~~~~~---~~~~~--~~~~~~~~tg~~~~~~~~~~~~~~~~~i~q~ 804 (823) ....+++||++++|+|++|.++.+...+. ....++. +-..+ ....|+++||++++.+ .||+++.+|+|+|+ T Consensus 699 ~~~~~r~~i~r~~~~~~~sg~~~~~v~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~tg~~~vp~-~g~~~~~~v~i~~d 777 (800) T protein:vir:97 699 VSYIDVPVVGLVHLNLDMYPDFSVEVKNVKSGKVRRVLASNRIGGALNNTVGYVEPREGVFRFPL-RAKSTDVVYRIIVE 777 (800) T ss_pred ceeecceEEEEEEEeecccccEEEEEccccCCceeeeecCccccccccccCCccccccceEEEEe-ecccceeEEEEEEC Confidence 33456689999999999999999865432 2222221 21122 1223568999999988 57999999999999 Q ss_pred CCCCEEEEEEEEEEEecCC Q lcl|Aclame:pro 805 DPLPLSVLAVIPRLTVGGF 823 (823) Q Consensus 805 ~P~P~tvla~~~~~~~~g~ 823 (823) +|||||||||..|...|=. T Consensus 778 ~PlP~tvlsi~~eg~y~~r 796 (800) T protein:vir:97 778 SPHTFQLRDIEWEGSYNPT 796 (800) T ss_pred CCCcEEEEEEEEEEEeecc Confidence 9999999999999999888 No 19 >protein:vir:3366 Length: 801 # NCBI annotation: tail tubular protein B # Family: family:all:825 # MgeID: mge:67 # MgeName: T3 # Cross-refs: genbank:acc:NP_523337;swissprot:trembl:q8w5u3;genbank:gi:17570828;goa:Q8W5U3;uniprot:Q8W5U3;genbank:GeneID:927453 Probab=100.00 E-value=1.5e-154 Score=863.83 Aligned_cols=713 Identities=14% Similarity=0.141 Sum_probs=493.0 Q ss_pred Cc-eeeeecccccccccccccccchHHHHHHHHhhhhcceeeecCCceecCcceeeeeecCCCC---CceEEEEEECCCC Q lcl|Aclame:pro 1 MA-ISWIQPSFAGGEIGPSLYGRIDMAKYQVALRKCDNFIVRQYGGVENRPGTRFVGAAKYPNR---KCRLIPFQFSTVQ 76 (823) Q Consensus 1 M~-~~~~q~sF~~GElsP~l~~r~Dl~ry~~q~~~~~N~~~~~~GGl~rRPGt~fva~~~~~~~---~~rLipF~~~~~~ 76 (823) |+ +.+..+||.+| +++|.|++||++||++|+||+|+|+|||+||||++||+++++++. ...+++|+|+++| T Consensus 1 M~~i~~~~~nl~~G-----vSqq~d~~r~~~q~~~~~N~~~~~~gG~~rRpGt~~va~~~~~~~~~~~~~~~~~~r~~~~ 75 (801) T protein:vir:33 1 MALISQSIKNLKGG-----ISQQPDILRFTEQGSVQINGWSSESEGIQKRPPMIHLKTLGTAGYVGAQPYVHLINRDEFE 75 (801) T ss_pred CceeEeeccceecc-----eeccchhHhhhhhHhhhhcceeecccCcccCchhHhhhhhcCCCccccceEEEEEEeCCce Confidence 99 68999999999 999999999999999999999999999999999999999987532 2234445889999 Q ss_pred eEEEEEeCCeEEEEECCceEe-eccccceEEeccccccccceeEEEEeCcEEEEEeCCceEEEEEEc------CCCCcee Q lcl|Aclame:pro 77 TYALEFGHQYMRVIKDGALVL-NSSNVIYEIATPYTEADLFRIKFTQSADVLTLVHPAYPPKELRRY------AHDNWQL 149 (823) Q Consensus 77 ~Y~l~fg~~~irV~~~~g~v~-~t~~~~~~~~tPyt~~~l~~L~~~qsaD~~fIvn~~~~p~~l~r~------~~~~ws~ 149 (823) +|+|+|++++||||+++|..+ .+...+|.. +.....+|+++|+||++||+|++++|++..+. .+..|.+ T Consensus 76 ~y~l~~~~~~irv~~~~G~~~~v~~~~~y~~----~~~~~~~l~~~t~aD~~fi~nr~~~p~~~~~~~~~~~~~~~~~~l 151 (801) T protein:vir:33 76 QYFVVFTGEDIKVFDLDGKEYQVRGDRSYVR----TANPREDLRMVTVADYTFVTNRKVVVQSNDQSVNLPGFKDQGDAL 151 (801) T ss_pred EEEEEEcCCeEEEEccCCcEEEEecCCccee----ecCcchheEEEEEcCEEEEeeCCeeecccCCcccccccCCCcceE Confidence 999999999999999877533 233333321 23345789999999999999999999875432 2233433 Q ss_pred eeEEEec-cccccc--cccceEEEEecccCCceeee-----ccccccccccccceEEEcccccceecceeeeeeeeeeee Q lcl|Aclame:pro 150 VDVVTKN-GPFEDI--NIDESLTVYASASTGTITLT-----ASASIFGAEQVGKLFYLEQPAVDSVPVWETSKSTSIGDI 221 (823) Q Consensus 150 ~~~~f~~-~p~~~i--~~~~s~t~t~~a~t~~~Tvt-----as~~~~~a~~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (823) ..+.... +..+.+ +.......+.........+. +........+....-.. ........|........... T Consensus 152 i~v~~~~yg~t~~I~i~gs~~~~~~~~~gs~~~~v~~~s~~~~A~~l~~~~~~~~~~~--~~~~~~~~w~~~~~~g~~~i 229 (801) T protein:vir:33 152 INVRGGQYGRRLSIEFNGAERAAVQLPDGSQPAHVNEVDGQAIAEKLAAQLRNNLGNP--NNDQDPNKWRFNVGPGFIHI 229 (801) T ss_pred EEEeecccceEEEEEECCcceEEEEeeccccccccccccchhhhhhhhhhhhccCccc--eeeecCceEEEEecCeEEEE Confidence 3221110 111112 12111111111111111110 00110000010000000 00000011111110000000 Q ss_pred EEeccce--------------ee-eEecccceeecccccCceEEEEeceeccccceEEEEEEecCccEEEEEEecCcccc Q lcl|Aclame:pro 222 RRADSNY--------------YR-AVTAGKTGTLRPSHTEGTSWDGWGGSGDDDTGIEWEYLHSGFGIARITAVNGTTAT 286 (823) Q Consensus 222 ~~~~~~~--------------~~-~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~~~~~~ 286 (823) ...++.. .. .....+.....|..........+.+....+....+..+....|.|++++.++.. . T Consensus 230 ~~p~~~~~~~itt~~g~~~~~~~~~~~~v~~~~~lp~~~~~g~~v~v~~~~~~~~~~y~v~~~~~~~~w~e~~~~g~~-~ 308 (801) T protein:vir:33 230 LAPNNDNVWGLQTKDGYADQLINPVTHYTQSFQKLPINAPDGYIVKIVGDTSKTADQYYVRFDLNRKVWVETIGWNTR-T 308 (801) T ss_pred ecCCCcccccccccCCccceeEEEEeecccceeeeeeecCCCcEEEEEecCCCcccceEEEEEcCCcEEEEeeccccc-e Confidence 0001100 00 001111122222222222222333333333333444556778999999876643 3 Q ss_pred ccEEEEeeccccccccCcceecccCccc-------CCCCc-------cEEEEEeceEEEEeCcCCCcEEEEEcccCcccc Q lcl|Aclame:pro 287 AEVISYIPSQVVGEDNASYKWAKYAWNS-------VNGYP-------GTVVYYQQRLYFAASTAFPQTIWASRTGDYKDF 352 (823) Q Consensus 287 ~~~~~~~~~~~~~~~~~t~~~~~~~w~~-------~~g~P-------s~v~f~q~RL~f~~~~~~p~~V~~Sr~gdy~nF 352 (823) .....+||+.+++..+++|+|+...|++ +|++| ++|+||||||+|++ |++|||||+|||||| T Consensus 309 ~~~~~tmp~~l~~~~~~tf~~~~~~w~~r~~gd~~tnp~psf~g~~~~~v~f~q~RL~f~~----~~~v~~Srtgd~~nF 384 (801) T protein:vir:33 309 HLHYHTMPWALVRASDGNFDFKYLEWGARTVGDDTTNPYPSFTGQTINDIFFFRNRLGFLS----GENIILSRTSKYFNF 384 (801) T ss_pred eeeecccceEEEEccCceEEecccCccccccCCccccCcccccCCCceEEEEEcceEEEee----CCeEEEEecCCcccc Confidence 4455679999999999999999999986 45555 55899999999998 578999999999999 Q ss_pred ccccc--CCCCCcEEEEEcCCCceEEEEEeecC-cEEEEecCcEEEEecCCCccccccceEEEEeecccCc-ccccEEeC Q lcl|Aclame:pro 353 GKSNP--TQDDDRIIYTYAGRQVNEIRHLIDVG-SLVALTSGGEYVITGDQNKVLTPSSFAFSSQGSNGSS-NVPPIAVA 428 (823) Q Consensus 353 ~~~t~--~~DdD~I~~~~~~~~~~~i~~~v~~~-~Ll~~t~~~q~~l~~~~~~~lTP~~~~i~~~s~~g~~-~~~Pv~vg 428 (823) +++++ ++|||||+++++++++++|+|+++++ +|+|||+++||+|+++ ++|||+|++++++|+|+|+ .++|+.+| T Consensus 385 ~~~t~~~~~DdD~i~~~~~~~~~~~i~~~v~~~~~L~l~t~~~q~~l~~~--~~lTP~~~~~~~~s~~~~~~~~~Pv~vg 462 (801) T protein:vir:33 385 FPASVSNYSDDDPIDVAVSHDRVSTLKYAVPFSEELLLWSDQAQFVLTAS--DILSSRSVGLNLTTQFDVQDRARPHGVG 462 (801) T ss_pred ccccccCCCCCccEEEEecCCcceeeeEEeecCCcEEEEecCcEEEEeCC--CcccceeEEEEEEEeecccCCCCceEec Confidence 99985 57999999999999999999999995 7999999999999863 6999999999999999975 69999999 Q ss_pred CeEEEEecCCCE---EEEEEeeccccceeecchHHHHHHhcCCCceEEEEEcC-CCcEEEEEEeCCCeEEEEEEe---cc Q lcl|Aclame:pro 429 NIALFVQEKGSV---VRDLAYSFDVDGYQGNDLTILANHLFQKHSIVDWCFSI-VPYSSAFCIRDDGKLLVMTYL---RD 501 (823) Q Consensus 429 ~~v~f~~~~g~~---v~e~~~~~~~d~~~~~dlt~~~~hl~~~~~~~~~a~~~-~p~~~~~~~~~dg~l~~~ty~---~~ 501 (823) +++||++++|++ +|+|.|++++|+|++.|||+|++|||++. +..+++++ ++..++|+..++++|++|+|+ +| T Consensus 463 ~~v~f~~~~g~~~~v~r~~~~~~~~d~y~~~Dlt~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~y~~~~~e 541 (801) T protein:vir:33 463 RNVYFSSPRASFTSINRYYAVQDVSSVKNAEDMTAHVPNYIPNG-VFSISGTTAENFVAILTSGAPNRVYIYKFLYIDEE 541 (801) T ss_pred CeEEEEecCCCeeEEEEEEeecccccceehhhHHHHHHHhcCCc-eEEEEEcCCCCeEEEEEecCCCEEEEEEEecCCCc Confidence 999999999964 46678999999999999999999999985 45555555 455556777889999999997 57 Q ss_pred ccceeEEeeccCCceEEEEEEecCCCCEEEEEEEecCCCcEEEEEEeec----cccCCcccceeEeeeeeEEecccccee Q lcl|Aclame:pro 502 QQVFAWAPQSSTGKYESTCSISEGNEDAVYFVVNRTVNGQTVRYIERLS----SRLFTSDEDAFFVDSGLSYDGRNTSDR 577 (823) Q Consensus 502 q~v~aW~~w~~~g~~~~~~~~~~~~~d~l~~~v~r~~~g~~~~~~e~~~----~~~~~~~~~~~~lD~~~~y~~~~~~~~ 577 (823) |+|+|||||+|+|.++++|+ ++.+|+|||+|+|.. + .++|||+ .......++++||||+..|..... T Consensus 542 ~~v~aW~~~~~~g~~~~~~~--~~~~d~l~~vv~r~~-~---~~le~~~~~~~~~d~~~~~~~~~lD~~~~~~~~~~--- 612 (801) T protein:vir:33 542 IRQQSWSHWDFGDNVTVFAA--QVINSTMTVLMSNEH-A---VWMGRLHFTKDSIDLPGEPYRLYIDAKRKYTIPAG--- 612 (801) T ss_pred eEEEeeEEEEcCCCEEEEEE--ecCCCEEEEEEEcCC-c---EEEEEEEEeeccccCCCccceEEeecceEEEeccc--- Confidence 77899999999999998885 667899999999973 3 5677765 223344667889999877632100 Q ss_pred eeEeeccccCcCccCcceEEecCCeEEcccccccEEEecccCceeEeeeEEEEEEEEeeEEecCCCceeeEecceeeeee Q lcl|Aclame:pro 578 TMTITGGSGEWDYLAEYTISVSGGAYFTSSDVGAQLQFPYTGADPDTGYEVSKELRCDIISVTSNTAVVVRANRNVPPSL 657 (823) Q Consensus 578 ~~~~~~~~~~l~~~~~~~v~~~dg~~~~~~~vgg~i~l~~~~~~~~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 657 (823) .+ .... .. T Consensus 613 ------------------------~~-~~~~---~~-------------------------------------------- 620 (801) T protein:vir:33 613 ------------------------TY-NDDT---YQ-------------------------------------------- 620 (801) T ss_pred ------------------------ce-ecCc---cc-------------------------------------------- Confidence 00 0000 00 Q ss_pred eeeeeecccccceeeecccccccceEEEEeCCceeCCEEEc---CC----EEEecCCCcEEEECcccceEEEEcceecCC Q lcl|Aclame:pro 658 RNVATTNWQMARRTFGGLSHLEGQTVNILSDANVEPQKVVS---GG----AVTLESPGAVVHIGLPITAEFETLDINING 730 (823) Q Consensus 658 ~~~~~~~~g~~~~~~~gl~~l~g~~v~v~~dg~~~~~~~v~---~g----~itl~~~~~~~~~gl~~~~~~~~l~~~~~~ 730 (823) .. .....+.||+||||++|.+++||++++..... .| ++.++.++++|||||+|+++++++||+++. T Consensus 621 -----t~--~~~~~~~gl~~~eg~~v~~~~dG~v~~~~~~~~~~~~~~~l~i~~~~~~~~v~vGl~y~s~~~~~~~~~~~ 693 (801) T protein:vir:33 621 -----TS--ISLSTIYGMNFTKGRVSVVFPDGKIVEIDQPINGWSSDPMLRLDGNQEGQVVYIGFNIPFTYTFSKFLIKK 693 (801) T ss_pred -----cc--cccccccCCccccceEEEEEeCCceEeeeeccccccCceeEEecCCCCCCEEEEeeeeeEEEEeCceEEec Confidence 00 00123458999999999999999987643332 23 334457799999999999999999999863 Q ss_pred C-Cc----c--cccceeEeeEEEEEEccccEEEecCCCceeEeec----cCC---CcCCCCCCcccceEEEEecCCcCCc Q lcl|Aclame:pro 731 Q-ET----L--LDKKQVIPSVTLVVNASRGIWATTPGGKWYEYPQ----REF---EFYDDPVDDATGKVEVKLDSNWGKN 796 (823) Q Consensus 731 ~-~~----~--~~~~~~i~~~~~~~~~s~~~~~~~~~~~~~~~~~----~~~---~~~~~~~~~~tg~~~~~~~~~~~~~ 796 (823) + ++ . .|| +||+++++++.+|.++.+..++. .++... +.. +.....|+++||++++.. .||+++ T Consensus 694 ~~~~~~~~~~~~~r-~~l~r~~~~~~~tg~~~v~v~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~tg~~~vp~-~g~~~~ 770 (801) T protein:vir:33 694 TAEDGSTATEDIGR-LQLRRAWVNYEDSGAFIIRVNNL-SREFIYTMAGARLGSDNLRVGGSNIGTGQYRFPV-VGNAQT 770 (801) T ss_pred cCCCCceeeeeecc-EEEEEEEEEeecCcceEEEECCc-ccceeeeecccccccccccccccccccceEEEEe-eccCce Confidence 2 21 2 334 68999999999999999876433 122222 111 112334678999999987 679999 Q ss_pred cEEEEEEcCCCCEEEEEEEEEEEecCC Q lcl|Aclame:pro 797 GRVKIRQLDPLPLSVLAVIPRLTVGGF 823 (823) Q Consensus 797 ~~~~i~q~~P~P~tvla~~~~~~~~g~ 823 (823) .+|+|+|++||||+||||..|...|=. T Consensus 771 ~~v~i~~d~P~P~tvl~i~~eg~y~~r 797 (801) T protein:vir:33 771 NTVTIESDASTPLNIIGCGWEGNYLRR 797 (801) T ss_pred EEEEEEeCCCCCEEEEEEEEEEEEecc Confidence 999999999999999999999999888 No 20 >protein:vir:103341 Length: 806 # NCBI annotation: tail tubular protein B-like protein # Family: family:all:825 # MgeID: mge:1609 # MgeName: Era103 # Cross-refs: genbank:acc:YP_001039670;genbank:gi:125999999;genbank:GeneID:4818417 Probab=100.00 E-value=2.1e-153 Score=857.65 Aligned_cols=717 Identities=15% Similarity=0.110 Sum_probs=506.8 Q ss_pred CceeeeecccccccccccccccchHHHHHHHHhhhhcceeeecCCceecCcceeeeeecCCC-CCceEEEEEE-CCCCeE Q lcl|Aclame:pro 1 MAISWIQPSFAGGEIGPSLYGRIDMAKYQVALRKCDNFIVRQYGGVENRPGTRFVGAAKYPN-RKCRLIPFQF-STVQTY 78 (823) Q Consensus 1 M~~~~~q~sF~~GElsP~l~~r~Dl~ry~~q~~~~~N~~~~~~GGl~rRPGt~fva~~~~~~-~~~rLipF~~-~~~~~Y 78 (823) |.+.+..+||.+| +++|.|++||++||++|+||+++|+|||+||||++||+++++.. ...+++.|++ ++.++| T Consensus 1 ~~v~~s~~nl~~G-----vSqQ~d~~R~~~q~~~~~N~~~~~~~Gl~rRPgt~~va~l~~~~~~~~~~~~~~~~~~~~~y 75 (806) T protein:vir:10 1 MEVQGSYGRQLQG-----VSQQPIAVRLPGQVTSQLNAVPNVVDGLKTRMGSKHLARILNSLDANSLIHHYKRGDDAEEY 75 (806) T ss_pred CeeEeecchhccc-----eeccChhHhhhhhhhhhhcceeccccccccCCchhhhhhhcCCCCccceEEEEEecCCceEE Confidence 9999999999999 99999999999999999999999999999999999999997654 3455667787 456799 Q ss_pred EEEEeCCeEEEEE-CCceEeeccccceEEe-ccccccccceeEEEEeCcEEEEEeCCceEEEEEEcC--CCCceeeeEEE Q lcl|Aclame:pro 79 ALEFGHQYMRVIK-DGALVLNSSNVIYEIA-TPYTEADLFRIKFTQSADVLTLVHPAYPPKELRRYA--HDNWQLVDVVT 154 (823) Q Consensus 79 ~l~fg~~~irV~~-~~g~v~~t~~~~~~~~-tPyt~~~l~~L~~~qsaD~~fIvn~~~~p~~l~r~~--~~~ws~~~~~f 154 (823) +++|.+++||||+ .+|........++.+. .+++.+++.+|+++|+||++||+|++++|+++.+.. ++.|.+..+ T Consensus 76 ~v~~~~g~i~v~~~~~G~~~~v~~~~~~~~yl~~~~~~~~~l~~~tvaD~tfi~n~~~~~~~~~~~~~~~~~~~~v~v-- 153 (806) T protein:vir:10 76 FVILQPGQVPVIFTVGGLACPVNTQGSAATYLSSSSLPRETTQLMTIGDYTFVLNRKMPVQARGDVTPSLDNKGLVYV-- 153 (806) T ss_pred EEEEcCCcEEEEEcCCCcEEEecCCCceEEEeccCCCCcceeeEEEEcCEEEEecCcEeeeecccccCCCCcceEEEE-- Confidence 9999999999998 4565444334444332 234556788999999999999999999999998743 445544322 Q ss_pred ecccccc-----ccccceEEEEecccCCceeeecccc-------------------ccccccccceEEEcccccceecce Q lcl|Aclame:pro 155 KNGPFED-----INIDESLTVYASASTGTITLTASAS-------------------IFGAEQVGKLFYLEQPAVDSVPVW 210 (823) Q Consensus 155 ~~~p~~~-----i~~~~s~t~t~~a~t~~~Tvtas~~-------------------~~~a~~vg~~~~~~~~~~~~~~~~ 210 (823) ..+++.. ++.....+.+..+.....+.....+ .+...+.|..+.+...... T Consensus 154 ~~g~y~~~y~i~Ing~~~a~~~t~~~~~~~~~~~~~~~~~a~~l~~~l~~~~~~~~~~~~~~~g~~~~i~~~~~~----- 228 (806) T protein:vir:10 154 AYANFSFTYQILINGQVAAEHKTASSEDVKNEDLVRTDYVAGKLLENFNSRTASFPGFSMYQDGNVLVVDNSNGA----- 228 (806) T ss_pred eecccCceeeEEeccceEEEEEeccCCCcccccccchhHHHHHHHhhhcccccccceeEEEEcccEEEEecCCCC----- Confidence 2333322 2322222222222221111111111 1111122222222111100 Q ss_pred eeeeeeeeeeeEEecc---ceeeeE-ecccceeecccccCceEEEEe---ceeccccceEEEEEEecCccEEEEEEecCc Q lcl|Aclame:pro 211 ETSKSTSIGDIRRADS---NYYRAV-TAGKTGTLRPSHTEGTSWDGW---GGSGDDDTGIEWEYLHSGFGIARITAVNGT 283 (823) Q Consensus 211 ~~~~~~~~~~~~~~~~---~~~~~~-~~~~t~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~g~~~~t~~~~~ 283 (823) .......++ .....+ ...+.....|.......-..+ ++...+..++.+.....+.+.|.+++.+.. T Consensus 229 -------~~~~~~~~g~~~~~~~~~~~~v~~~~~lp~~~~~g~~v~i~~~~~~~~~~y~v~~~~~~~~~~~w~e~~~~~~ 301 (806) T protein:vir:10 229 -------NYALTTVDGADGQDLVAIRHKVTNLDTLPNRAPVGYKVQVWPTGSKPESRYWLQAESQDGSKVTWVETIAPGV 301 (806) T ss_pred -------ccEEEEeeCCCCceeEEeecccCccccCccccCCCcEEEEeccCCCCCCceEEEEEeeccCceEEEeeccccc Confidence 000000000 000000 011111111222211111111 122223344445554566778888764443 Q ss_pred cccccEEEEeeccccccc-----cCcceecccCccc-------CCCCc-----------cEEEEEeceEEEEeCcCCCcE Q lcl|Aclame:pro 284 TATAEVISYIPSQVVGED-----NASYKWAKYAWNS-------VNGYP-----------GTVVYYQQRLYFAASTAFPQT 340 (823) Q Consensus 284 ~~~~~~~~~~~~~~~~~~-----~~t~~~~~~~w~~-------~~g~P-----------s~v~f~q~RL~f~~~~~~p~~ 340 (823) .......+||+.+++.. .+++.++...|.+ +|++| +.|+||||||+|++ |++ T Consensus 302 -~~~~~~~t~p~~~v~~~~~~~~~~~~~~~~~~w~~r~~Gd~~tn~~psF~~~~~~~~it~v~f~q~RL~f~s----~~~ 376 (806) T protein:vir:10 302 -RKGWNAATMPHVLVRESLNANGSANFTYRPGEWEDRDVGDDLTNDFPSLLNDSSPQPISSMLMVQNRLMLTS----GEA 376 (806) T ss_pred -ccceeccccceEEEeeeeeecccceeEEEecccccccccccccCccCcccCCCCCccceEEEEEeeeEEEec----CCe Confidence 22334466787776654 6777777777743 23333 56899999999996 578 Q ss_pred EEEEcccCcccccccc--cCCCCCcEEEEEcCCCceEEEEEeecC-cEEEEecCcEEEEecCCCccccccceEEEEeecc Q lcl|Aclame:pro 341 IWASRTGDYKDFGKSN--PTQDDDRIIYTYAGRQVNEIRHLIDVG-SLVALTSGGEYVITGDQNKVLTPSSFAFSSQGSN 417 (823) Q Consensus 341 V~~Sr~gdy~nF~~~t--~~~DdD~I~~~~~~~~~~~i~~~v~~~-~Ll~~t~~~q~~l~~~~~~~lTP~~~~i~~~s~~ 417 (823) |||||+|||+||++++ +++|||||+++++++++++|+|+++++ +|+|||+++||+|+++ ++|||+|++++++|+| T Consensus 377 v~~Srsgd~~nF~~~t~~~~~DdD~I~~~~ss~~~~~i~~~v~~~~~L~l~t~~~q~~l~~~--~~lTP~~~~~~~~s~~ 454 (806) T protein:vir:10 377 VVASRTSRFFDFFRYTVLATVDTDPFDVFADIEEVYNIRWSAQMDGDVVLFTSDQQFTLPGD--KPLTPTSAVIRPVTQF 454 (806) T ss_pred EEEEccCCcccCccccccCCCCCccEEEEEcCCcceeeeeeeecCCcEEEEecCcEEEEeCC--CcccceeEEEEEEEee Confidence 9999999999999998 457999999999999999999999996 7999999999999874 5999999999999999 Q ss_pred cCc-ccccEEeCCeEEEEecCC--CEEEEEEeeccccceeecchHHHHHHhcCCCceEEEEEcCCCcEEEEEEeCCCeEE Q lcl|Aclame:pro 418 GSS-NVPPIAVANIALFVQEKG--SVVRDLAYSFDVDGYQGNDLTILANHLFQKHSIVDWCFSIVPYSSAFCIRDDGKLL 494 (823) Q Consensus 418 g~~-~~~Pv~vg~~v~f~~~~g--~~v~e~~~~~~~d~~~~~dlt~~~~hl~~~~~~~~~a~~~~p~~~~~~~~~dg~l~ 494 (823) +|+ +|+|+.+|++++|++++| ++||||.|++++|+|++.|||+|++|||+++.+.+++++++|.+++|++++||+|+ T Consensus 455 ~~~~~~~Pv~vG~~v~Fv~~~g~~s~vre~~y~~~~d~~~~~DlT~~~~hl~~g~~~~~~~~~~~~~~~~~~~~~dg~l~ 534 (806) T protein:vir:10 455 KMTPGVKPAPSGDSILFAFDQGSYSGIREFFTDSYSDTKKAQPATSHVDKYIRGKVLELSASSSFNRAFIITSPDRNILY 534 (806) T ss_pred cccCCCCceEeCCeEEEeeCCCCeeEEEEEEeeeeccceehhhHHHHHHHhcCCCeEEEEEeCCCCcEEEEEEcCCCEEE Confidence 975 699999999999999999 67999999999999999999999999999999999999999999999999999999 Q ss_pred EEEEe---ccccceeEEeeccCCc--eEEEEEEecCCCCEEEEEEEecC--CCcEEEEEEeeccccCC--cccceeEeee Q lcl|Aclame:pro 495 VMTYL---RDQQVFAWAPQSSTGK--YESTCSISEGNEDAVYFVVNRTV--NGQTVRYIERLSSRLFT--SDEDAFFVDS 565 (823) Q Consensus 495 ~~ty~---~~q~v~aW~~w~~~g~--~~~~~~~~~~~~d~l~~~v~r~~--~g~~~~~~e~~~~~~~~--~~~~~~~lD~ 565 (823) +|+|+ +||+|+|||||+|+|. +++|+++ +|++|++|+|++ +|..++|||+|+...+. ...+++|||| T Consensus 535 ~~ty~~~~~e~~v~aW~rw~~~~~~~~~~~~~~----~d~l~~vv~R~~~~~g~~~~~iE~~~~~~~~~~~~~~~~~lD~ 610 (806) T protein:vir:10 535 VYDWLYEGTEKVQNAWHKWSFPAGTVLHAVSYS----NEKLYLVLTRTNTSGGVAGVYIEVMDMGDELEYGLQDRVRMDR 610 (806) T ss_pred EEEEeecCCceEEEeEEeeeeCCCeEEEEEEEe----cCeEEEEEEEcCCcccEEEEEEEeecCCCCCCcccceeeeccc Confidence 99997 6788999999999876 4444432 689999999986 88999999999876543 4557889999 Q ss_pred eeEEeccccceeeeEeeccccCcCccCcceEEecCCeEEcccccccEEEecccCceeEeeeEEEEEEEEeeEEecCCCce Q lcl|Aclame:pro 566 GLSYDGRNTSDRTMTITGGSGEWDYLAEYTISVSGGAYFTSSDVGAQLQFPYTGADPDTGYEVSKELRCDIISVTSNTAV 645 (823) Q Consensus 566 ~~~y~~~~~~~~~~~~~~~~~~l~~~~~~~v~~~dg~~~~~~~vgg~i~l~~~~~~~~vG~~~~~~~~~~~~~~~~~~~~ 645 (823) +.+|.+...+...........+++|+++..+.+ T Consensus 611 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~----------------------------------------------- 643 (806) T protein:vir:10 611 RATLSMTYNATTRVWTSSALPWLPQDLSSLDAV----------------------------------------------- 643 (806) T ss_pred cceEEEeccccccceeeeeeccccccccceeEE----------------------------------------------- Confidence 999876422211000000011222332222111 Q ss_pred eeEecceeeeeeeeeeeecccccceeeecccccccceEEEEeCCceeCCEEEcCCEEEecCCCcEEEECcccceEEEEcc Q lcl|Aclame:pro 646 VVRANRNVPPSLRNVATTNWQMARRTFGGLSHLEGQTVNILSDANVEPQKVVSGGAVTLESPGAVVHIGLPITAEFETLD 725 (823) Q Consensus 646 ~~~~~~~v~~~~~~~~~~~~g~~~~~~~gl~~l~g~~v~v~~dg~~~~~~~v~~g~itl~~~~~~~~~gl~~~~~~~~l~ 725 (823) ..+|+.|++|+.+.+..+|.. .+++.+...++.++.+|||||+|+++++++| T Consensus 644 -------------------------~~~g~~~~~g~~~~~~~~~~~---~~v~~~~~~~~~~~~~v~vGl~Y~s~~~~t~ 695 (806) T protein:vir:10 644 -------------------------LVSGWAGYVGGAFQFSYNASN---NTISTNFDLAEGNTATIVVGETYWYEVEPTP 695 (806) T ss_pred -------------------------EEeeccccCCceEEEEEcCcc---ceEeeeeeecCCCCcEEEEeeeeeEEEEECC Confidence 112345667777777776652 3455555666788999999999999999999 Q ss_pred eecCC--CCcccccceeEeeEEEEEEccccEEEec-CCCceeE-e----eccCC--CcCCCCCCcccceEEEEecCCcCC Q lcl|Aclame:pro 726 INING--QETLLDKKQVIPSVTLVVNASRGIWATT-PGGKWYE-Y----PQREF--EFYDDPVDDATGKVEVKLDSNWGK 795 (823) Q Consensus 726 ~~~~~--~~~~~~~~~~i~~~~~~~~~s~~~~~~~-~~~~~~~-~----~~~~~--~~~~~~~~~~tg~~~~~~~~~~~~ 795 (823) |.+.. .++..++++||+++.+++.+|.++.+-. +.+..++ + +++.. +.....|+++||++++.+ .+|++ T Consensus 696 p~~~~~~~~~~~~~r~~l~r~~~~~~~s~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~tg~~~vp~-~~~~~ 774 (806) T protein:vir:10 696 PLIKDSKDRVSYLDTPTVGNVYLNLDMYPDFSVVVTDKETLQERTVYLANKTAGSITNVIGYIAPHEGTLRIPL-RRKST 774 (806) T ss_pred eeEeccCCCccccccEEEEEEEEEeecceeeEEEEcccCCCcceeeeccCcccccccccccccccccceEEEEe-eecCc Confidence 88753 3567889999999999999998887632 2222222 2 22211 223345679999999987 57999 Q ss_pred ccEEEEEEcCCCCEEEEEEEEEEEecCC Q lcl|Aclame:pro 796 NGRVKIRQLDPLPLSVLAVIPRLTVGGF 823 (823) Q Consensus 796 ~~~~~i~q~~P~P~tvla~~~~~~~~g~ 823 (823) +++|+|+|++||||+||||..|...|=. T Consensus 775 ~~~v~i~~d~P~P~tvlai~~eg~y~~r 802 (806) T protein:vir:10 775 DVSFKIRSKSPATFQLRDIEWTGSYNPR 802 (806) T ss_pred eeEEEEEECCCCceEEEEEEEEEEeecc Confidence 9999999999999999999999999887 No 21 >protein:vir:78957 Length: 826 # NCBI annotation: putative tail tubular protein B # Family: family:all:825 # MgeID: mge:1860 # MgeName: LKD16 # Cross-refs: genbank:acc:YP_001522826;genbank:gi:158345061;genbank:GeneID:5687447 Probab=100.00 E-value=1.1e-153 Score=859.14 Aligned_cols=710 Identities=13% Similarity=0.119 Sum_probs=496.2 Q ss_pred Cc-eeeeecccccccccccccccchHHHHHHHHhhhhcceeeecCCceecCcceeeeeecCCCCCceEEEEEE-----CC Q lcl|Aclame:pro 1 MA-ISWIQPSFAGGEIGPSLYGRIDMAKYQVALRKCDNFIVRQYGGVENRPGTRFVGAAKYPNRKCRLIPFQF-----ST 74 (823) Q Consensus 1 M~-~~~~q~sF~~GElsP~l~~r~Dl~ry~~q~~~~~N~~~~~~GGl~rRPGt~fva~~~~~~~~~rLipF~~-----~~ 74 (823) |+ +.+.++||.+| +++|.|++||++||++|+||+++|+|||+||||++||++++++. +.+++||.+ ++ T Consensus 1 M~~i~~~~~nl~gG-----vSqq~d~~r~~~q~~~~~N~~~~~~gG~~rRpgt~~va~~~~~~-~~~~~~f~~~~~r~s~ 74 (826) T protein:vir:78 1 MSYKQSAYPNLLMG-----VSQQVAFERLPGQLSEQINMVSDPVSGLRRRSGIELMASLLHTD-QPWPRPYLYHTNLGGR 74 (826) T ss_pred Ccceeeecchhccc-----eecccchHhhhhhhhhhhcceeccccccccCCchHhhhhhccCC-cCCceeEEEEeccCCc Confidence 99 68999999999 89999999999999999999999999999999999999998765 467777765 56 Q ss_pred CCeEEEEEeCCeEEEEECC-ceEeeccccceEEeccccccccceeEEEEeCcEEEEEeCCceEEE-EEEcCCCCceeeeE Q lcl|Aclame:pro 75 VQTYALEFGHQYMRVIKDG-ALVLNSSNVIYEIATPYTEADLFRIKFTQSADVLTLVHPAYPPKE-LRRYAHDNWQLVDV 152 (823) Q Consensus 75 ~~~Y~l~fg~~~irV~~~~-g~v~~t~~~~~~~~tPyt~~~l~~L~~~qsaD~~fIvn~~~~p~~-l~r~~~~~ws~~~~ 152 (823) +++|+|+|++++||||+++ |..+... + +..+||++++.++|+++|+||++||+|++++|+. +.+....+|...++ T Consensus 75 e~~~~l~~~~g~irv~~~~~g~~~~~~--~-~~~~y~~~~~~~~l~~~t~aD~~fi~n~~~~p~~~~~~~~~~~~~~~~~ 151 (826) T protein:vir:78 75 SIAMLVAQHRGELYLFDEKDGRLLMGQ--P-LVHDYLKASDYRQLRAATVADDLFIANLEVRPEADKADVLGVDPSKTGW 151 (826) T ss_pred ceEEEEEEcCCcEEEEECCCCEEEEec--C-cccceeecCCcceeEEEEEcCEEEEEcCcEeeeeccccccCCCCCceEE Confidence 6789999999999999854 4333221 1 2467888889999999999999999999999976 44555566766666 Q ss_pred EEeccccccccccceEEEEecccCCceeeeccccccccccccce------------EEEcccccc---eecceee----- Q lcl|Aclame:pro 153 VTKNGPFEDINIDESLTVYASASTGTITLTASASIFGAEQVGKL------------FYLEQPAVD---SVPVWET----- 212 (823) Q Consensus 153 ~f~~~p~~~i~~~~s~t~t~~a~t~~~Tvtas~~~~~a~~vg~~------------~~~~~~~~~---~~~~~~~----- 212 (823) .+..+..+. .+.+++.+.++.....+...+...+.....+.. -++...... ....|.. T Consensus 152 ~~v~~g~y~--~~y~v~i~~~~~~~~~~~s~t~~y~t~~~~~~~~~~~~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~t~ 229 (826) T protein:vir:78 152 LYIKAGQYS--KAFSLTIKVKDNATGTTYSHTATYVTPDNASTNPNLAEAPFQTSVGYIAWQLFGKFFGAPEYTLPNSTK 229 (826) T ss_pred EEecccccC--ceeEEEeccceeecccccceeEEEEeccCCccccccccccceecchhhheecceeeccccceeeeccce Confidence 654433221 111222222111111111111111111000000 000000000 0000000 Q ss_pred ----------------------eeeeeee---------eeEEeccceeeeEec-------ccceeecccccCceE-E--- Q lcl|Aclame:pro 213 ----------------------SKSTSIG---------DIRRADSNYYRAVTA-------GKTGTLRPSHTEGTS-W--- 250 (823) Q Consensus 213 ----------------------~~~~~~~---------~~~~~~~~~~~~~~~-------~~t~~~~~~~~~~~~-~--- 250 (823) ....... ......+..+..... .+.....+....... . T Consensus 230 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~l~a~~p~~~~~~~~~~~~ 309 (826) T protein:vir:78 230 KYPKVDPDPAAATVAGYLNQRGVQDGYIAFRGDGDIVVEVSTDMGNNYGIASGGMSLNATADLPALLPGAGTPGTGVQFM 309 (826) T ss_pred eEeeccccccceeeccceeecccccceEEEecCCCeEEEeccCCCccceEEEeeEEEecccceeeeecccccceEEEEEE Confidence 0000000 000000000000000 000000111111110 0 Q ss_pred EEeceeccccceEEEEEEecCccEEEEEEecCccccccEEEEeecccc-ccccCcceecccCccc-------CCCCcc-- Q lcl|Aclame:pro 251 DGWGGSGDDDTGIEWEYLHSGFGIARITAVNGTTATAEVISYIPSQVV-GEDNASYKWAKYAWNS-------VNGYPG-- 320 (823) Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~~~~~~~~~~~~~~~~~~-~~~~~t~~~~~~~w~~-------~~g~Ps-- 320 (823) ++............|..+....|.|+|++.++.... ..+||+.++ ....++|+|+...|.+ +|++|+ T Consensus 310 ~~~~~~~g~~~~~~y~~~~~~~~~w~e~a~~g~~~~---~~tmp~~l~~~~~~~~f~~~~~~w~~r~~gd~~tnp~psf~ 386 (826) T protein:vir:78 310 DGAIMATGSTKAPVYFAWDAANRRWAERAAYGTDWV---LKKMPLALRWDESTDTYSLNELEYDRRGSGDEETNPTFNFV 386 (826) T ss_pred eeeEecCCCcccceeEEEEcCCceEEEeeccCcccc---cccccEEEEEecCCCeEEEeeccccccccCcccccCccccc Confidence 111111112222334455567789999998776433 357999987 4568899999999975 366664 Q ss_pred -----EEEEEeceEEEEeCcCCCcEEEEEcccCcccccccc--cCCCCCcEEEEEcCCCceEEEEEeecC-cEEEEecCc Q lcl|Aclame:pro 321 -----TVVYYQQRLYFAASTAFPQTIWASRTGDYKDFGKSN--PTQDDDRIIYTYAGRQVNEIRHLIDVG-SLVALTSGG 392 (823) Q Consensus 321 -----~v~f~q~RL~f~~~~~~p~~V~~Sr~gdy~nF~~~t--~~~DdD~I~~~~~~~~~~~i~~~v~~~-~Ll~~t~~~ 392 (823) +|+||||||+|++ |++|||||+|||+||++++ ++.|||||++++++++++.|+|+++++ +|+|||+++ T Consensus 387 g~~i~~v~f~q~RL~f~~----~~~v~~Srtgd~~nF~~~t~~~~~DdD~I~~~~~s~~~~~i~~~v~~~~~L~l~T~~~ 462 (826) T protein:vir:78 387 KRGITGMTTFQGRLVLLS----QEYVCMSASNNPHRWFKKSAAALNDDDPIEIAAQGSLTEPYEHAVTFNKDLIVFAKKY 462 (826) T ss_pred CCCceEEEEEeceEEEee----CCeEEEEeccCccccccccccCCCCCCcEEEEEccCcceeEEEEEecCCcEEEEecCc Confidence 6899999999998 5689999999999999997 457999999999999999999999985 799999999 Q ss_pred EEEEecCCCccccccceEEEEeecccCc-ccccEEeCCeEEEEecCCC---EEEEEEeecccc-ceeecchHHHHHHhcC Q lcl|Aclame:pro 393 EYVITGDQNKVLTPSSFAFSSQGSNGSS-NVPPIAVANIALFVQEKGS---VVRDLAYSFDVD-GYQGNDLTILANHLFQ 467 (823) Q Consensus 393 q~~l~~~~~~~lTP~~~~i~~~s~~g~~-~~~Pv~vg~~v~f~~~~g~---~v~e~~~~~~~d-~~~~~dlt~~~~hl~~ 467 (823) ||+|+++ ++|||+|++++++|+|+|+ +|+|+.+|+++||++++|+ +||||.|+.+.+ .|+++|||+|++|||+ T Consensus 463 e~~l~~~--~~lTP~~~~~~~~s~~~~~~~~~Pv~vG~~v~F~~~r~~~~s~v~e~~~~~~~~~~y~~~dlt~~~~~l~~ 540 (826) T protein:vir:78 463 QAVVPGG--GIVTPRTAVISITTQYDVDTRAAPAVTGRSVYFAAERALGFMGLHEMAPSPSTDSHYVAEDVTSHIPSYMP 540 (826) T ss_pred EEEEeCC--CcccceeEEEEEEEeecccCCCCceEeCCeEEEEecCCCceeEEEEEEeeecccCccchHHHHHHHHHhcC Confidence 9999864 5999999999999999975 6999999999999998873 799999997766 4999999999999998 Q ss_pred CCceEEEEEcCCCcEEEEEEeCCCeEEEEEEe---ccccceeEEeeccCCceEEEEEEecCCCCEEEEEEEecCCCcEEE Q lcl|Aclame:pro 468 KHSIVDWCFSIVPYSSAFCIRDDGKLLVMTYL---RDQQVFAWAPQSSTGKYESTCSISEGNEDAVYFVVNRTVNGQTVR 544 (823) Q Consensus 468 ~~~~~~~a~~~~p~~~~~~~~~dg~l~~~ty~---~~q~v~aW~~w~~~g~~~~~~~~~~~~~d~l~~~v~r~~~g~~~~ 544 (823) + .+..|+++++|++++|++++||+|++|+|+ +||+|+|||||+|+|+|++||++ +|+||++|+|++++...| T Consensus 541 ~-~v~~~a~s~~~~~~v~~~~~~g~l~~~ty~~~~~e~~v~aW~~~~~~g~v~~v~~i----~d~l~~vv~r~~~~~~~r 615 (826) T protein:vir:78 541 G-PAEYIQAAASSGYLVFGTSAADEMICHQYLWQGNEKVQNAYHRWTLRHQIIGAYFT----GDNLMVLIQKGQEIALGR 615 (826) T ss_pred C-CeEEEEEeCCCCeEEEEEcCCCeEEEEEEEecCCcEEEEeEEEEccCCcEEEEEEE----CCeEEEEEEeCCCEEEEE Confidence 7 689999999999999999999999999997 78889999999999999999988 689999999999987777 Q ss_pred E-EEeeccccCCcc-cceeEeeeeeEEeccccceeeeEeeccccCcCccCcceEEecCCeEEcccccccEEEecccCcee Q lcl|Aclame:pro 545 Y-IERLSSRLFTSD-EDAFFVDSGLSYDGRNTSDRTMTITGGSGEWDYLAEYTISVSGGAYFTSSDVGAQLQFPYTGADP 622 (823) Q Consensus 545 ~-~e~~~~~~~~~~-~~~~~lD~~~~y~~~~~~~~~~~~~~~~~~l~~~~~~~v~~~dg~~~~~~~vgg~i~l~~~~~~~ 622 (823) + +|+|+....... ...++.+|...+++. .++++.++... T Consensus 616 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~----------------------- 656 (826) T protein:vir:78 616 MHLNSLPAREGLQYPKYDYWRRIEATVDGE----------------LELTKQHWDLI----------------------- 656 (826) T ss_pred EEEEecCCCccccccccceeEEEEEEEcce----------------eccccceeEEe----------------------- Confidence 6 788765443222 223445554443321 11111111100 Q ss_pred EeeeEEEEEEEEeeEEecCCCceeeEecceeeeeeeeeeeecccccceeeecccccccceEEEEeCCceeCCEEEcCCEE Q lcl|Aclame:pro 623 DTGYEVSKELRCDIISVTSNTAVVVRANRNVPPSLRNVATTNWQMARRTFGGLSHLEGQTVNILSDANVEPQKVVSGGAV 702 (823) Q Consensus 623 ~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~g~~~~~~~gl~~l~g~~v~v~~dg~~~~~~~v~~g~i 702 (823) ..-.++.||+|+.+.+..++.+... .+.+|++ T Consensus 657 -----------------------------------------------~~~~~~~~~~g~~~~~~~~~~~~~~-~~~~~~~ 688 (826) T protein:vir:78 657 -----------------------------------------------KDGAAVYQLQPQVGAYMERYQLGVK-RETSTKV 688 (826) T ss_pred -----------------------------------------------cCCceeeeeccceeeeccccceecc-ccCCCce Confidence 0001256777777776666665443 3456776 Q ss_pred EecCC----CcEEEECcccceEEEEcceecCCC-Cccccc-ceeEeeEEEEEEccccEEEecCCCce-----eEe-eccC Q lcl|Aclame:pro 703 TLESP----GAVVHIGLPITAEFETLDININGQ-ETLLDK-KQVIPSVTLVVNASRGIWATTPGGKW-----YEY-PQRE 770 (823) Q Consensus 703 tl~~~----~~~~~~gl~~~~~~~~l~~~~~~~-~~~~~~-~~~i~~~~~~~~~s~~~~~~~~~~~~-----~~~-~~~~ 770 (823) +|+.+ +.+|+|||+|++++++|||+++.+ |..+++ +.|++++++++.+|..+.+....+.- ++. +.|. T Consensus 689 ~l~~~~~~~~~~v~VGl~y~s~~~~~~~~~~~~~g~~~~~~r~~l~r~~~~~~~tg~~~v~v~~~~~~~~~~~~~~~~~~ 768 (826) T protein:vir:78 689 FLDVPEAVVGSVYVVGCEFWSKVEFTPPVLRDHNGLPMTSTRAVLHRYNVNFGWTGEFLWRISDTARPNQPWYDTTPLRL 768 (826) T ss_pred EEEeCCCccccEEEEeeceeEEEEeCceEEecCCCcceeecceEEEEEEEEeeccccEEEEeCCCccCcceeeeeccccc Confidence 66544 679999999999999999998754 554443 35899999999999999987543321 111 2221 Q ss_pred C-CcC-CCCCCcccceEEEEecCCcCCccEEEEEEcCCCCEEEEEEEEEEEecCC Q lcl|Aclame:pro 771 F-EFY-DDPVDDATGKVEVKLDSNWGKNGRVKIRQLDPLPLSVLAVIPRLTVGGF 823 (823) Q Consensus 771 ~-~~~-~~~~~~~tg~~~~~~~~~~~~~~~~~i~q~~P~P~tvla~~~~~~~~g~ 823 (823) . +.+ ..+|...+|++++.. .+|+++.+|+|+|++|||||||||..+...|=+ T Consensus 769 ~~~~l~~g~~~~~t~~v~vp~-~~~~~~~~i~i~~d~P~P~tvlai~~~~~y~~r 822 (826) T protein:vir:78 769 SSRQLNAGEPLVDSAVVPLPA-RVDMATSKFELSCHSPYDMNVRAVEYNFKSNQT 822 (826) T ss_pred ccccccCCcccccceEEEEee-eccCceEEEEEEeCCCCcEEEEEEeEEEEecce Confidence 1 222 234556799998876 689999999999999999999999999998888 No 22 >protein:vir:105647 Length: 800 # NCBI annotation: putative tail tubular B protein # Family: family:all:825 # MgeID: mge:1674 # MgeName: K1E # Cross-refs: genbank:acc:YP_425011;genbank:gi:83571759;uniprot:Q2WC41;genbank:GeneID:3837288 Probab=100.00 E-value=4.5e-151 Score=844.86 Aligned_cols=712 Identities=14% Similarity=0.099 Sum_probs=506.0 Q ss_pred CceeeeecccccccccccccccchHHHHHHHHhhhhcceeeecCCceecCcceeeeeecCCCCCceEEEEEE----CCCC Q lcl|Aclame:pro 1 MAISWIQPSFAGGEIGPSLYGRIDMAKYQVALRKCDNFIVRQYGGVENRPGTRFVGAAKYPNRKCRLIPFQF----STVQ 76 (823) Q Consensus 1 M~~~~~q~sF~~GElsP~l~~r~Dl~ry~~q~~~~~N~~~~~~GGl~rRPGt~fva~~~~~~~~~rLipF~~----~~~~ 76 (823) |.+.+..+||.+| +++|.|++||++||++|+||+|+|+|||+||||++||++++++. ..++++|.+ .+.+ T Consensus 1 ~~v~~s~~nl~~G-----vSqQ~d~~R~~~q~~~~~N~~~~~~gGl~rRpGt~fva~l~~~~-~~~~~~~~~~~~~~~~~ 74 (800) T protein:vir:10 1 MEVQGSLGRQIQG-----ISQQPPAVRLDGQCTTMVNMVPDVVNGTQSRMGTTHIAKLLDEG-TDNMATHHYRRGEGDEE 74 (800) T ss_pred CeEEeecchhccc-----ccccchhHhhhhhhhhhhcceeeeccCcccCCcceEEEeecCCC-CCccEEEEEecCCccce Confidence 9999999999999 99999999999999999999999999999999999999998754 333333322 2345 Q ss_pred eEEEEEeCCeEEEEECCceEeeccccceEEecc-ccccccceeEEEEeCcEEEEEeCCceEEEEEEcCCCCceeeeEEEe Q lcl|Aclame:pro 77 TYALEFGHQYMRVIKDGALVLNSSNVIYEIATP-YTEADLFRIKFTQSADVLTLVHPAYPPKELRRYAHDNWQLVDVVTK 155 (823) Q Consensus 77 ~Y~l~fg~~~irV~~~~g~v~~t~~~~~~~~tP-yt~~~l~~L~~~qsaD~~fIvn~~~~p~~l~r~~~~~ws~~~~~f~ 155 (823) .|+++|+++++|||+++|.++...........+ .+..+.++|+++|+||++||+|++++|+++.|.+++.|..+.+... T Consensus 75 ~~~~~~~g~~~rv~~~~G~~~~v~~~~~~~~~~~~~~~~~~~l~~~tvaD~tfi~n~~~~~~~~~~~~~~~~~~~~~~vr 154 (800) T protein:vir:10 75 YFFTLKKGQVPEIFDKHGRKCNVISQDAPMTYLSEVVNPREDVQFMTIADVTFMLNRRKVVKVSNRKSPKVGDKAIVFCA 154 (800) T ss_pred EEEEEEcCCeEEEEecCCcEEEeecCCcceeeeeccCCchhhEEEEEEcCEEEEecCcccccccccCCCCCCceEEEEEe Confidence 677888889999999998765432222112222 2344567899999999999999999999999999999988877666 Q ss_pred ccccc---cccccce--EEEEecccCC-ceeeecccccc-----------------ccccccceEEEcccccceecceee Q lcl|Aclame:pro 156 NGPFE---DINIDES--LTVYASASTG-TITLTASASIF-----------------GAEQVGKLFYLEQPAVDSVPVWET 212 (823) Q Consensus 156 ~~p~~---~i~~~~s--~t~t~~a~t~-~~Tvtas~~~~-----------------~a~~vg~~~~~~~~~~~~~~~~~~ 212 (823) .+++. .++.+.. +..+....+. ......+...+ .....|..+++..... T Consensus 155 ~g~y~~~y~i~i~g~~~~~~~t~~~~~~~~~~~~s~~~i~~~L~~~l~~~~~~~~~t~~~~g~~i~i~~~~~-------- 226 (800) T protein:vir:10 155 YGQYGTSYSIIINGTTAASFKTPDGGSAEHVEQIRTERITSELYSKLQQWSGVNDYEIQRDGTSIFIERRDG-------- 226 (800) T ss_pred ccccccceeEEeccceEEEEEecCCCcccccccccHHHHHHHHHhhhhhcCcccceEEEEcCcEEEEEEecC-------- Confidence 66654 2332222 2222222221 11111111111 1111122222111100 Q ss_pred eeeeeeeeeEEeccceeeeEe--cccceeecccccCceEEEEece--eccccceEEEEEEecCccEEEEEEecCcccccc Q lcl|Aclame:pro 213 SKSTSIGDIRRADSNYYRAVT--AGKTGTLRPSHTEGTSWDGWGG--SGDDDTGIEWEYLHSGFGIARITAVNGTTATAE 288 (823) Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~--~~~t~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~~~~t~~~~~~~~~~ 288 (823) ...........++..+..+. ......+...+..+..+..... ...+..+..+.....+.+.|++++..+... .. T Consensus 227 -~~~~~~~~~~~~~~~~~~~~~~v~~~~~Lp~~~~~g~~~~i~~~~~~~~~~y~~~~~~~~~~~~~w~e~~~~~~~~-~~ 304 (800) T protein:vir:10 227 -KSFTVTTTDGAKGKDLVAIKNKVSSTDLLPSRAPAGYKVQVWPTGSKPESRYWLQAEPKEGNLVSWKETIAADVLL-GF 304 (800) T ss_pred -CceEEEEeecCCcceEEEEEeeccceeeccccCCCCceEEEEcCCCCCCceeEEEEEeccccceEEEeecccCcee-ee Confidence 00111111111122221111 1112223333334433333222 122223333333334678899988766643 34 Q ss_pred EEEEeeccccccc----cCcceecccCccc-------CCCC-----------ccEEEEEeceEEEEeCcCCCcEEEEEcc Q lcl|Aclame:pro 289 VISYIPSQVVGED----NASYKWAKYAWNS-------VNGY-----------PGTVVYYQQRLYFAASTAFPQTIWASRT 346 (823) Q Consensus 289 ~~~~~~~~~~~~~----~~t~~~~~~~w~~-------~~g~-----------Ps~v~f~q~RL~f~~~~~~p~~V~~Sr~ 346 (823) ...+||+.+++.. .+++.+.+..|.+ +|++ |++|+||||||+|++ |++|||||+ T Consensus 305 ~~~tmp~~lv~~~~~~~~~~~~~~~~~w~~r~~gd~~tnp~psf~~~~~~~~i~~v~f~q~RL~f~~----~~~v~~Srt 380 (800) T protein:vir:10 305 DKGTMPYIIERTGIIDGIAQFKIRQGDWEDRKVGDDLTNPMPSFIDEEVPQTIGGMFMVQNRLCFTA----GEAVIASRT 380 (800) T ss_pred ecccccEEEEEeeeeecceeEEEEeccccccccCCCCCCCCchhcCCCCCCCceeEEEEeeeEEEee----CCeEEEEcc Confidence 4567888877665 7788888888854 3444 566889999999998 568999999 Q ss_pred cCcccccccc--cCCCCCcEEEEEcCCCceEEEEEeecC-cEEEEecCcEEEEecCCCccccccceEEEEeecccC-ccc Q lcl|Aclame:pro 347 GDYKDFGKSN--PTQDDDRIIYTYAGRQVNEIRHLIDVG-SLVALTSGGEYVITGDQNKVLTPSSFAFSSQGSNGS-SNV 422 (823) Q Consensus 347 gdy~nF~~~t--~~~DdD~I~~~~~~~~~~~i~~~v~~~-~Ll~~t~~~q~~l~~~~~~~lTP~~~~i~~~s~~g~-~~~ 422 (823) |||+||++++ +++|||||+++++++++++|+|+++++ +|+|||+++||+|+++ ++|||+|++++++|+|++ +.| T Consensus 381 gd~~nF~~~t~~~~~DdD~I~~~~ss~~~~~i~~~v~~~~~L~l~T~g~q~~l~g~--~~lTP~~~~i~~~s~~~~~~~~ 458 (800) T protein:vir:10 381 SYFFDFFRYTVISALATDPFDIFSDASEVYQLKHAVTLDGATVLFSDKSQFILPGD--KPLEKSNALLKPVTTFEVNNKV 458 (800) T ss_pred CCccccccccccCCCCCccEEEEEcCCcceeeeeEeecCCcEEEEecCcEEEEeCC--CcccceeEEEEEEEeeeccCCC Confidence 9999999997 457999999999999999999999996 7999999999999974 599999999999999876 579 Q ss_pred ccEEeCCeEEEEecCCC--EEEEEEeeccccceeecchHHHHHHhcCCCceEEEEEcCCCc-EEEEEEeCCCeEEEEEEe Q lcl|Aclame:pro 423 PPIAVANIALFVQEKGS--VVRDLAYSFDVDGYQGNDLTILANHLFQKHSIVDWCFSIVPY-SSAFCIRDDGKLLVMTYL 499 (823) Q Consensus 423 ~Pv~vg~~v~f~~~~g~--~v~e~~~~~~~d~~~~~dlt~~~~hl~~~~~~~~~a~~~~p~-~~~~~~~~dg~l~~~ty~ 499 (823) +|+.+|++++|++++|+ +||||.|++++|+|++.|||+|++|||++ .+..+++++.|+ .++|+..++++|++|+|+ T Consensus 459 ~Pv~vG~~v~Fv~~~g~~s~vre~~~~~~~d~~~a~DlT~~~~hl~~~-~v~~~~~~~~~~~~v~~~~~~~~~l~~~~yl 537 (800) T protein:vir:10 459 KPVVTGESVMFATNDGSYSGVREFYTDSYSDTKKAQAITSHVNKLIEG-NITNMAASTNVNRLLVTTDKYRNIIYCYDWL 537 (800) T ss_pred CceEeCCeEEEecCCCCeeEEEEEeeeecccceehhhHHhHHHHhcCC-ceEEEEEeCCCCeEEEEEEcCCCeEEEEEEe Confidence 99999999999999995 69999999999999999999999999997 456666666555 555777789999999997 Q ss_pred ---ccccceeEEeeccC-CceEEEEEEecCCCCEEEEEEEecCCCcEEEEEEeecccc--CCcccceeEeeeeeEEeccc Q lcl|Aclame:pro 500 ---RDQQVFAWAPQSST-GKYESTCSISEGNEDAVYFVVNRTVNGQTVRYIERLSSRL--FTSDEDAFFVDSGLSYDGRN 573 (823) Q Consensus 500 ---~~q~v~aW~~w~~~-g~~~~~~~~~~~~~d~l~~~v~r~~~g~~~~~~e~~~~~~--~~~~~~~~~lD~~~~y~~~~ 573 (823) +||+++|||||+++ |.+..+|++. +|+||++|+|+.+ +|||||+... +...++++||||+.++.+.. T Consensus 538 ~~~~e~~~~aW~~w~~~~~~~~~~~~~~---~d~l~~iv~r~~~----~~ier~~~~~~~~~~~~~~~~lD~~~~~~~~~ 610 (800) T protein:vir:10 538 WQGTDRVQSAWHVWEWPMGTKVRGMFYS---GELLYLLLERGDG----VYLEKMDMGDALTYGLNDRIRMDRQAELIFKH 610 (800) T ss_pred ecCCceEEEEEEEEEcCCCcEEEEEEEe---CCeEEEEEECCCc----EEEEEEecccCccccccceeeeecceeecccc Confidence 78889999999985 4444444443 6999999999744 9999997644 34567899999998765432 Q ss_pred cceeeeEeeccccCcCccCcceEEecCCeEEcccccccEEEecccCceeEeeeEEEEEEEEeeEEecCCCceeeEeccee Q lcl|Aclame:pro 574 TSDRTMTITGGSGEWDYLAEYTISVSGGAYFTSSDVGAQLQFPYTGADPDTGYEVSKELRCDIISVTSNTAVVVRANRNV 653 (823) Q Consensus 574 ~~~~~~~~~~~~~~l~~~~~~~v~~~dg~~~~~~~vgg~i~l~~~~~~~~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~v 653 (823) .+.. +..+ +.+ T Consensus 611 ~~~~----------------------~~~~----------~~~------------------------------------- 621 (800) T protein:vir:10 611 FKAE----------------------DEWI----------SEP------------------------------------- 621 (800) T ss_pred cccC----------------------cceE----------EEe------------------------------------- Confidence 1110 0000 000 Q ss_pred eeeeeeeeeecccccceeeecccccccceEEEEeCCceeCCEEEcCCEEEec-------CCCcEEEECcccceEEEEcce Q lcl|Aclame:pro 654 PPSLRNVATTNWQMARRTFGGLSHLEGQTVNILSDANVEPQKVVSGGAVTLE-------SPGAVVHIGLPITAEFETLDI 726 (823) Q Consensus 654 ~~~~~~~~~~~~g~~~~~~~gl~~l~g~~v~v~~dg~~~~~~~v~~g~itl~-------~~~~~~~~gl~~~~~~~~l~~ 726 (823) .+.......++.++++....++++|.++....+.+|.++++ .++.+|+|||+|+++++++|| T Consensus 622 -----------~~~~~~~~~~~~~~~~~~~~~~~~g~v~~~~~~~~g~~~~~~~~~~g~~~~~~v~VGl~Y~s~~~~~~~ 690 (800) T protein:vir:10 622 -----------LPWTPTNPELLDCILIEGWDSYIGGSFLFKYKPSDNTLSTTFDMHDDNHVKAKVIVGQIYPQEFEPTPV 690 (800) T ss_pred -----------ccccccCCcceEEeeeccceeecCceeEEEEEecCCceEeeeeecCCCcccceEEEeeeeeEEEeecce Confidence 00000011246666666678888888888888889999885 467899999999999999999 Q ss_pred ecCCC-Cccccc-ceeEeeEEEEEEccccEEEecCCCceeE--eeccCC------CcCCCCCCcccceEEEEecCCcCCc Q lcl|Aclame:pro 727 NINGQ-ETLLDK-KQVIPSVTLVVNASRGIWATTPGGKWYE--YPQREF------EFYDDPVDDATGKVEVKLDSNWGKN 796 (823) Q Consensus 727 ~~~~~-~~~~~~-~~~i~~~~~~~~~s~~~~~~~~~~~~~~--~~~~~~------~~~~~~~~~~tg~~~~~~~~~~~~~ 796 (823) ++..+ |..+++ ++||++++|++.+|.++.++..+..-.+ ...... +.....++++||++++.+ .+|+++ T Consensus 691 ~i~~~~g~~~~~~r~~i~r~~~~~~~sg~~~~~v~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~tg~~~vp~-~g~~~~ 769 (800) T protein:vir:10 691 VIRDRQDRVSYIDVPVVGLVHLNLDMYPDFSVEVKNVKSGKVRRVLASNRIGGALNNTVGYVEPREGVFRFPL-RAKSTD 769 (800) T ss_pred EEEcCCCcccccCCeEEEEEEEEeecCceEEEEeccCcccceeEEccCCeeccccccccCcccccCceEEEEE-eccCce Confidence 98643 554444 5699999999999999999765433221 112111 111223568999999987 679999 Q ss_pred cEEEEEEcCCCCEEEEEEEEEEEecCC Q lcl|Aclame:pro 797 GRVKIRQLDPLPLSVLAVIPRLTVGGF 823 (823) Q Consensus 797 ~~~~i~q~~P~P~tvla~~~~~~~~g~ 823 (823) .+|+|+|++||||+||||..|...|=. T Consensus 770 ~~v~i~~d~P~P~tvlai~~eg~y~~r 796 (800) T protein:vir:10 770 AVYRIIVESPHTFQLRDIEWEGSYNPT 796 (800) T ss_pred eEEEEEECCCCcEEEEEEEEEEEeecc Confidence 999999999999999999999999888 No 23 >protein:vir:78703 Length: 905 # NCBI annotation: tail tube B # Family: family:all:825 # MgeID: mge:1856 # MgeName: Syn5 # Cross-refs: genbank:acc:YP_001285450;genbank:gi:148724484;genbank:GeneID:5220174 Probab=100.00 E-value=7.8e-138 Score=772.27 Aligned_cols=715 Identities=15% Similarity=0.175 Sum_probs=491.3 Q ss_pred Cc-eeeeecccccccccccccccchHHHHHHHHhhhhcceeeecCCceecCcceeeeeecCCC-CCceEEEEEECCCCeE Q lcl|Aclame:pro 1 MA-ISWIQPSFAGGEIGPSLYGRIDMAKYQVALRKCDNFIVRQYGGVENRPGTRFVGAAKYPN-RKCRLIPFQFSTVQTY 78 (823) Q Consensus 1 M~-~~~~q~sF~~GElsP~l~~r~Dl~ry~~q~~~~~N~~~~~~GGl~rRPGt~fva~~~~~~-~~~rLipF~~~~~~~Y 78 (823) |+ +.+..+||.+| ++++.|.+|+++|+++|+||+|+|+.||+||||++||+.+.++. ...+++++.|++.|+| T Consensus 1 M~~v~~si~nl~~G-----vSqQp~~~r~pgQ~~~q~N~~~d~v~Gl~kRp~~~~i~~l~~~~~~~~~~~~~~r~~~e~y 75 (905) T protein:vir:78 1 MGAVLQKIPNLLGG-----VSQQPDPVKLPGQVREAENVYLDPTFGCRKRPATKFVGELATNLPSDTRWFPIFRDAGERY 75 (905) T ss_pred CccceecchhhhCc-----eeecchhhcCCcchhhhhccccccccccccCchhhhhhhhcCCCCCCceEEEEEeCCCceE Confidence 99 68899999999 99999999999999999999999999999999999999998764 4567778899999999 Q ss_pred EEEEeCC-----eEEEEEC-Cce---EeeccccceEEeccccccccceeEEEEeCcEEEEEeCCceEEEEEEc--CCCCc Q lcl|Aclame:pro 79 ALEFGHQ-----YMRVIKD-GAL---VLNSSNVIYEIATPYTEADLFRIKFTQSADVLTLVHPAYPPKELRRY--AHDNW 147 (823) Q Consensus 79 ~l~fg~~-----~irV~~~-~g~---v~~t~~~~~~~~tPyt~~~l~~L~~~qsaD~~fIvn~~~~p~~l~r~--~~~~w 147 (823) ++.+... .||||+. +|. |...+... +..++....+|++++++|++||+|++++|+.-... ....| T Consensus 76 ~~~~~~~g~~~~~i~v~d~~~G~~~~V~~~~~~~----~yl~~~~~~~l~~~tv~d~tfi~N~~~~~~~~~~~~~~~~~~ 151 (905) T protein:vir:78 76 AVALYKDGSGNTQVRVWDMQTGAERTVTPDATAT----AYLATTNLNNLNWLTVADYTLLSNKERIVTMSGASEVDSNQR 151 (905) T ss_pred EEEEeeCCCCCcceEEEEccCCcEEEEecCCCcc----ceeecCCCcceEEEEEcCEEEEEcCceeeeecCCCCcCCCCe Confidence 9999642 4999998 464 32222211 22234456799999999999999999999632211 11122 Q ss_pred eeeeEEEeccccc------ccccc-----------------------------------------------ceEEEEe-- Q lcl|Aclame:pro 148 QLVDVVTKNGPFE------DINID-----------------------------------------------ESLTVYA-- 172 (823) Q Consensus 148 s~~~~~f~~~p~~------~i~~~-----------------------------------------------~s~t~t~-- 172 (823) - +.+..+..+ .|+.. ....... T Consensus 152 ~---~~~v~~g~y~r~y~v~I~~~~~~~~~t~~~~~a~~~s~~s~~~~~~g~~~~~~~~~~~~~t~~~~~~l~f~~~~~~ 228 (905) T protein:vir:78 152 A---LVEINAISYNTTYSIDLDRDGASQQVKVYRAKALEISPGSFEVEDGGVCTEHDVQNYTNQTIGSSTGLAFQVRVQC 228 (905) T ss_pred E---EEEEEeeccceeEEEEEeCCCCceeeeeeccccceeccccccccccccccccceeeeecceeeccCCceeEEeecc Confidence 1 111111100 00000 0000000 Q ss_pred ccc------C--Cceeee--------ccccccccccccceEEEcccc--------cce---------------------- Q lcl|Aclame:pro 173 SAS------T--GTITLT--------ASASIFGAEQVGKLFYLEQPA--------VDS---------------------- 206 (823) Q Consensus 173 ~a~------t--~~~Tvt--------as~~~~~a~~vg~~~~~~~~~--------~~~---------------------- 206 (823) ++. . ...+.. +..+.+.-..-|..+++.-.. .+. T Consensus 229 ~~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~~~v~~~g~~y~i~i~~~~~~~~~~~~~~~~~~t~~d~~a~~~~~~~i~~ 308 (905) T protein:vir:78 229 AAYLENNEYRSRYNVSVVLQNGGTGFRKGDMITVNLNGRDYNIRVTQEEFVYTYASDGTAAHTTPQDSTAGTLDIGQITA 308 (905) T ss_pred ccccCCCcccccccceeeeeccccccccCccEEEeeccceEEEEEecceeEEEecCCCcccccCccCccCccccHHHHHH Confidence 000 0 000000 001112111112221110000 000 Q ss_pred --------ecceeeeeeeeeeeeEEecc-------------ceeeeE-ecccceeecccccCceEEEEeceeccccceEE Q lcl|Aclame:pro 207 --------VPVWETSKSTSIGDIRRADS-------------NYYRAV-TAGKTGTLRPSHTEGTSWDGWGGSGDDDTGIE 264 (823) Q Consensus 207 --------~~~~~~~~~~~~~~~~~~~~-------------~~~~~~-~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (823) ...|..........+...++ ....++ ...+.....|......+...+.+......... T Consensus 309 ~l~~~~~~~~~~~~~~~g~~i~v~~~~~~~~~~~~~~g~~~~~~~~~~~~v~~~~~Lp~~~~~g~~v~v~~~~~~~~d~y 388 (905) T protein:vir:78 309 GLVNSVNLISNYSAQAVGNVIEIERTDGRDFNLGVRGGATNRAMTAIKGTANSIVDLPGQCFDGFELKVINTENAESDDY 388 (905) T ss_pred HHHHhhcccccEEEEecCcEEEEEecCCCccEEEEeccCCcceEEEEeccccccccCccccCCCcEEEEEeCCCCCcceE Confidence 00000000000000000000 000000 00111111122222222222222222222222 Q ss_pred EEEE------ecCccEEEEEEecCccccccEEEEeeccccccccCcceecccC-------cc-------cCCCCc----- Q lcl|Aclame:pro 265 WEYL------HSGFGIARITAVNGTTATAEVISYIPSQVVGEDNASYKWAKYA-------WN-------SVNGYP----- 319 (823) Q Consensus 265 ~~~~------~~~~g~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~-------w~-------~~~g~P----- 319 (823) +..+ ..+.|.|.|+..++... .....+||+.+++...++|.+.... |. ++|++| T Consensus 389 yv~~~~~~~~~~~~~~W~E~~~~~~~~-~~~~~tmp~~l~r~~~g~f~~~~~~~~~~~~~~~~r~~Gd~~Tnp~psf~g~ 467 (905) T protein:vir:78 389 YVVFRSAAEGIPGSGSWEETVAPGIER-GFNTSTMPHALIRQADGNFTLEALNDEGTITGWAQREVGDDDTNPKPSFVGR 467 (905) T ss_pred EEEEEecccCCcCceeEEEeccccccc-ccccccccEEEEEecCceEEEEEeccccccccccccccCCcccCCCCcccCC Confidence 2222 23456899987766543 3344669999999988888755443 43 255555 Q ss_pred --cEEEEEeceEEEEeCcCCCcEEEEEcccCccccccccc--CCCCCcEEEEEcCCCceEEEEEeecC-cEEEEecCcEE Q lcl|Aclame:pro 320 --GTVVYYQQRLYFAASTAFPQTIWASRTGDYKDFGKSNP--TQDDDRIIYTYAGRQVNEIRHLIDVG-SLVALTSGGEY 394 (823) Q Consensus 320 --s~v~f~q~RL~f~~~~~~p~~V~~Sr~gdy~nF~~~t~--~~DdD~I~~~~~~~~~~~i~~~v~~~-~Ll~~t~~~q~ 394 (823) ++|+||||||+|++ |++|||||+|||+||+++++ +.|||||+++++++++++|+|+++++ +|+|||+++|| T Consensus 468 ~is~v~f~q~RL~f~s----~~~v~~Srtgd~~nF~~~t~~~~~DdDpI~~~~ss~~~~~i~~~v~~~~~L~ifT~g~ef 543 (905) T protein:vir:78 468 GISDMFFYNNRLGFLS----EDAVIMSQPGDYFNFFVTSAITISDSDPIDVTASSTKPAILRAAIGAPKGLILFAENSQF 543 (905) T ss_pred CcceEEEEcceEEEec----CCeEEEEccCCccccccccccCCCCCccEEEEEcCCcceeeEEEeecCCcEEEEecCceE Confidence 56789999999997 56899999999999999975 46999999999999999999999985 79999999999 Q ss_pred EEecCCCccccccceEEEEeecccCc-ccccEEeCCeEEEEecCCC--EEEEEEeeccccceeecchHHHHHHhcCCCce Q lcl|Aclame:pro 395 VITGDQNKVLTPSSFAFSSQGSNGSS-NVPPIAVANIALFVQEKGS--VVRDLAYSFDVDGYQGNDLTILANHLFQKHSI 471 (823) Q Consensus 395 ~l~~~~~~~lTP~~~~i~~~s~~g~~-~~~Pv~vg~~v~f~~~~g~--~v~e~~~~~~~d~~~~~dlt~~~~hl~~~~~~ 471 (823) +|+++ +.+|||+|++++++|.|+|+ +|+|+.+|+++||++++|+ +||||.|++++|+|++.|+|+|++|||++. T Consensus 544 ~lsg~-~~~lTP~s~~i~~~S~~~~~~~v~Pv~vG~~vlFv~~~g~~s~vre~~y~~~~d~y~a~DlT~~a~hl~~g~-- 620 (905) T protein:vir:78 544 LLASQ-EVVFSTATIKLTEISDYFYRSLAKPVSTGVSIAFVSEADTYSKIFEMSIDSVDNRPQVADITRIVPEYVPTG-- 620 (905) T ss_pred EEecC-CccccceeEEEEeEEeecccCCCCcEEeCCeEEEeecCCCeeEEEEEEeeecccceehhHHHHHHHHhcCCc-- Confidence 99975 46899999999999999975 6999999999999999995 599999999999999999999999999875 Q ss_pred EEEEEcCCCcEEEEEEeCCCeEEEEEEe---ccccceeEEeeccCCceEEEEEEecCCCCEEEEEEEecCCCcEEEEEEe Q lcl|Aclame:pro 472 VDWCFSIVPYSSAFCIRDDGKLLVMTYL---RDQQVFAWAPQSSTGKYESTCSISEGNEDAVYFVVNRTVNGQTVRYIER 548 (823) Q Consensus 472 ~~~a~~~~p~~~~~~~~~dg~l~~~ty~---~~q~v~aW~~w~~~g~~~~~~~~~~~~~d~l~~~v~r~~~g~~~~~~e~ 548 (823) +.++++++|.+++|+++++|+||+|+|+ +||+|+|||||+|+|.++++|++ .|.+|++|+|.++|+.++|+|+ T Consensus 621 v~~~~~s~~~~~v~~~~~~~~l~~ytyl~~~~eq~v~AWsrw~~~G~~~~~a~i----~d~~~~vV~r~~~G~~~~~~~~ 696 (905) T protein:vir:78 621 LTWSVSTPNNSMMLFGDNSNTAYIFKFFNQGNERQVAGWSKWILPGEQRMCGFF----ADTGYFVLYDSTTGSYVLSAME 696 (905) T ss_pred eEEEEecCCCcEEEEEcCCCeEEEEEeecCCCceeEEeEEEEecCCCeEEEEEE----cCCEEEEEEEccCCeEEEEEEe Confidence 4577788999999999999999999996 78889999999999999998887 3689999999999999999999 Q ss_pred eccccC---CcccceeEeeeeeEEeccccceeeeEeeccccCcCccCcceEEecCCeEEcccccccEEEecccCceeEee Q lcl|Aclame:pro 549 LSSRLF---TSDEDAFFVDSGLSYDGRNTSDRTMTITGGSGEWDYLAEYTISVSGGAYFTSSDVGAQLQFPYTGADPDTG 625 (823) Q Consensus 549 ~~~~~~---~~~~~~~~lD~~~~y~~~~~~~~~~~~~~~~~~l~~~~~~~v~~~dg~~~~~~~vgg~i~l~~~~~~~~vG 625 (823) |..... .....++++||...|.... + ++. T Consensus 697 l~~~~~~~~~d~~~~~~~~~~d~~~~~~--------------------------~------------~t~---------- 728 (905) T protein:vir:78 697 LLDDPDSASIDTAFSSFLPRLDNYVVKS--------------------------D------------LTV---------- 728 (905) T ss_pred eccccCccccccceeeeeeccceeeecc--------------------------c------------cee---------- Confidence 954321 1112233333322221000 0 000 Q ss_pred eEEEEEEEEeeEEecCCCceeeEecceeeeeeeeeeeecccccceeeecccccccceEEEEeCCceeCC---EEEcCCEE Q lcl|Aclame:pro 626 YEVSKELRCDIISVTSNTAVVVRANRNVPPSLRNVATTNWQMARRTFGGLSHLEGQTVNILSDANVEPQ---KVVSGGAV 702 (823) Q Consensus 626 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~g~~~~~~~gl~~l~g~~v~v~~dg~~~~~---~~v~~g~i 702 (823) +. .+. ........+++.|++++.+.+.+||.+.+. ..+.+|.+ T Consensus 729 -------------~~-~~~--------------------~~~~~~~~~~~~~~~~~~~~~~~dG~~~~~~~~~~~~~~~~ 774 (905) T protein:vir:78 729 -------------VD-NGD--------------------GTLTVDLEAGQAMTGATPVIMFTDGPSEFAFSQPTITAGQF 774 (905) T ss_pred -------------cc-cCc--------------------ceEeeeccCccccccceeEEEeeCCceeeeEEEEEeeceee Confidence 00 000 000122235677888888888889987653 34456666 Q ss_pred EecCCCcEEEECcccceEEEEcceecCCC-CcccccceeEeeEEEEEEccccEEEecCCCceeEeec----cCC--CcCC Q lcl|Aclame:pro 703 TLESPGAVVHIGLPITAEFETLDININGQ-ETLLDKKQVIPSVTLVVNASRGIWATTPGGKWYEYPQ----REF--EFYD 775 (823) Q Consensus 703 tl~~~~~~~~~gl~~~~~~~~l~~~~~~~-~~~~~~~~~i~~~~~~~~~s~~~~~~~~~~~~~~~~~----~~~--~~~~ 775 (823) ++ .++..++|||+|+++++++|+++..+ ++.+++++||+++.|||++|.+++++.+++..+++.. +.+ .+.+ T Consensus 775 t~-~~a~~v~VGl~Y~s~v~~~p~~~~~~~~s~~~~~~rI~rv~lr~~~Sg~~~v~v~~~~~~~~~~~~~~~~~~~~~~~ 853 (905) T protein:vir:78 775 TV-DTTDDFVVGFKYETKITLPGFFTSEENKADRVYAPIVEFLYLDLYYSGRYQIEVDRIGYDTINIDAGSIDANIYLAD 853 (905) T ss_pred cc-ccCCeEEEeeeeeEEEeecceEeccCCCcccccceEEEEEEEEeecceeEEEEEcCCCcceecccccceecCcccCc Confidence 55 46788999999999999999998764 8889999999999999999999999876655554433 333 3457 Q ss_pred CCCCcccceEEEEecCCcCCccEEEEEEcCCCCEEEEEEEEEEEecCC Q lcl|Aclame:pro 776 DPVDDATGKVEVKLDSNWGKNGRVKIRQLDPLPLSVLAVIPRLTVGGF 823 (823) Q Consensus 776 ~~~~~~tg~~~~~~~~~~~~~~~~~i~q~~P~P~tvla~~~~~~~~g~ 823 (823) .+|.++||++++.+ .+|+++.+|+|+|++||||+||||..|...|=. T Consensus 854 ~~p~~~tg~~~vP~-~g~~~~~~v~I~sd~PlP~tvlsi~weg~Yn~r 900 (905) T protein:vir:78 854 GAPLKEIATENVPL-FTPGDQVTVTIKAPDPFPSAITGYSWQGHYNRR 900 (905) T ss_pred ccccccccEEEEEe-eccCceeEEEEEECCCCcEEEEEEEEEEEeccc Confidence 78888999999988 589999999999999999999999999999888 No 24 >protein:vir:100022 Length: 976 # NCBI annotation: T7-like tail tubular protein B # Family: family:all:825 # MgeID: mge:1604 # MgeName: P-SSP7 # Cross-refs: genbank:acc:YP_214208;genbank:gi:61806431;genbank:GeneID:3294702 Probab=100.00 E-value=1.1e-135 Score=760.50 Aligned_cols=730 Identities=15% Similarity=0.162 Sum_probs=480.7 Q ss_pred Cc-eeeeecccccccccccccccchHHHHHHHHhhhhcceeeecCCceecCcceeeeeecCCCC-------CceEEEEEE Q lcl|Aclame:pro 1 MA-ISWIQPSFAGGEIGPSLYGRIDMAKYQVALRKCDNFIVRQYGGVENRPGTRFVGAAKYPNR-------KCRLIPFQF 72 (823) Q Consensus 1 M~-~~~~q~sF~~GElsP~l~~r~Dl~ry~~q~~~~~N~~~~~~GGl~rRPGt~fva~~~~~~~-------~~rLipF~~ 72 (823) |+ +.+..+||.+| ++++.|.+|+++|+++|+||+|+|+.||+||||++||+.+.+... ...+++++| T Consensus 1 M~~v~~si~nl~~G-----vSqQp~~~r~pgQ~~~q~N~~~d~v~Gl~kRp~~~~v~~l~~~~~~~~~~~~~~~~~~~~r 75 (976) T protein:vir:10 1 MASVTQTIPTLTGG-----LSQQPDELKIPGQVSVANNVIPDVTHGLLKRPGGKLVASISDNGTAALNSQTNGKWFSYYR 75 (976) T ss_pred CcceeecchhhhCc-----ceecchhhcCCchhhhhhccccccccccccCCcceeeeeecCCCcccccccccceEEEEEc Confidence 99 68999999999 999999999999999999999999999999999999999976542 235577899 Q ss_pred CCCCeEEEEEe-CCeEEEEEC-CceE---eeccccceEEeccccccccceeEEEEeCcEEEEEeCCceEEEEEEcCCCCc Q lcl|Aclame:pro 73 STVQTYALEFG-HQYMRVIKD-GALV---LNSSNVIYEIATPYTEADLFRIKFTQSADVLTLVHPAYPPKELRRYAHDNW 147 (823) Q Consensus 73 ~~~~~Y~l~fg-~~~irV~~~-~g~v---~~t~~~~~~~~tPyt~~~l~~L~~~qsaD~~fIvn~~~~p~~l~r~~~~~w 147 (823) +++++|++.+. +|+++||+. +|.. ...++....+.+.-++++..+|++++++|++||+|++++|+.-.... ..- T Consensus 76 ~~~e~y~~~~~~~g~~~v~~~~~G~~~~v~~~~~~~~~~~~yl~~~~~~~~~~~tv~d~tfi~N~~~~~~~~~~~~-~~~ 154 (976) T protein:vir:10 76 DETESYIGQVSRSGDINMWRCSDGQAMTVNYDSGTATALTTYLTHTNDEDIQTLTLNDYTFLTNRTKTVAMSSTVE-PVR 154 (976) T ss_pred CCCcEEEEEEecCCceEEEEccCCeEEEEEcCCCcccccchhhccCCcceeEEEEEccEEEEecCceEEeeccccc-CCC Confidence 99999999998 567999998 4642 22222222233322455678899999999999999999996321111 111 Q ss_pred eeeeEEEecccccc------ccccc---eEE-EEe--------------------------------------------- Q lcl|Aclame:pro 148 QLVDVVTKNGPFED------INIDE---SLT-VYA--------------------------------------------- 172 (823) Q Consensus 148 s~~~~~f~~~p~~~------i~~~~---s~t-~t~--------------------------------------------- 172 (823) ....+.+..+..+. |+... +.+ .++ T Consensus 155 ~~~~~~~v~~~~y~~~y~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~s~~~G~~~~~~ 234 (976) T protein:vir:10 155 PPEVFIDLKATAYARQYAVNLFDNTTTTAVSTVTRIDVELIKSSNNYCDSNGAMVARTSRPSNSTRCDDSAGDGRDAYAP 234 (976) T ss_pred CceEEEEeeeeccceEEEEEEcCCcccceeeeeeeeeeccccCCcccccccccchhhHhHhhhhhcccccccccccccCc Confidence 11122211111100 00000 000 000 Q ss_pred -------cccCCc-------------------------------------------------------e--eeecccccc Q lcl|Aclame:pro 173 -------SASTGT-------------------------------------------------------I--TLTASASIF 188 (823) Q Consensus 173 -------~a~t~~-------------------------------------------------------~--Tvtas~~~~ 188 (823) .-..+. + .++.+..+. T Consensus 235 ~v~~~~f~~~~G~~~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~Y~~~y~~~~~v~ 314 (976) T protein:vir:10 235 NVGTKVFNVTDGASLTDEANSGSYTYTIDVKDSSNNSVNRGVNLYFRIRTVGQSVPFTTGSGSSATTTYQARYTTTFDLL 314 (976) T ss_pred eeeeeEEEeccCccceEcCCcceEEEEeeccccceEEeecCCceEEEEccccceeecccccccceeeeeeEEEEeEEEEe Confidence 000000 0 000000000 Q ss_pred c---cccccceEEEc--cccccee-------cceee-----------e--eee------------------eeeeeEEec Q lcl|Aclame:pro 189 G---AEQVGKLFYLE--QPAVDSV-------PVWET-----------S--KST------------------SIGDIRRAD 225 (823) Q Consensus 189 ~---a~~vg~~~~~~--~~~~~~~-------~~~~~-----------~--~~~------------------~~~~~~~~~ 225 (823) . ....+....+. +...... ..+.. . ... ..+...... T Consensus 315 ~~~~g~~~~~~~~V~v~g~~Y~it~~~~~~~~~~a~~~~~~~~~t~~d~~~~~~~~~ia~~L~~~l~a~~~~~g~tv~~~ 394 (976) T protein:vir:10 315 YGGTGWQEGDYFYVWMKDGYYKITVEAISTANVQANLGLIRPNPTPFDTETAVTAESIIGDIRTAIIATGNFTSANVQQI 394 (976) T ss_pred cCCCCcccCceEEEEccccceeeEEEEeeceeEEeccccccCcCCcCcccccccHHHHHHHHHHhhcccccccceEEEEc Confidence 0 00000000000 0000000 00000 0 000 000000000 Q ss_pred cc-------------------eeeeEec-ccceeecccccCceEEEEecee--ccccceEEEEEEe--cCccEEEEEEec Q lcl|Aclame:pro 226 SN-------------------YYRAVTA-GKTGTLRPSHTEGTSWDGWGGS--GDDDTGIEWEYLH--SGFGIARITAVN 281 (823) Q Consensus 226 ~~-------------------~~~~~~~-~~t~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~--~~~g~~~~t~~~ 281 (823) ++ .+.+... .++....|..........+... ..++.++.|.... .+.|.|+|++.+ T Consensus 395 g~~~~i~~~~~~~~~s~~~~~~~~~~~~~V~~~~~LP~~~~~g~~v~V~~~~~~~d~yyv~~~~~~~~~~~~~w~E~~~~ 474 (976) T protein:vir:10 395 GTGLYVTRPSGTFNVTAPSSDLLRVMSGEVANVDDLPSQCKHGYVVKVANSEADADDYYVKFFGHNNRDGDGVWEECAKP 474 (976) T ss_pred CcEEEEEecCcceEecCCCceeEEEEEeeecchhhhhhhccCCcEEEEecCCCCceeEEEEeeccccccccceEEEeecc Confidence 00 0111100 0001111221111111111111 1122233333222 345689999887 Q ss_pred CccccccEEEEeeccccccccCcceecccCccc-------CCCCccE-------EEEEeceEEEEeCcCCCcEEEEEccc Q lcl|Aclame:pro 282 GTTATAEVISYIPSQVVGEDNASYKWAKYAWNS-------VNGYPGT-------VVYYQQRLYFAASTAFPQTIWASRTG 347 (823) Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~w~~-------~~g~Ps~-------v~f~q~RL~f~~~~~~p~~V~~Sr~g 347 (823) +... +....+||+.+.+...++|.+++..|.+ +|++|+| |+||||||+|++ |++|||||+| T Consensus 475 g~~~-g~~~~tmP~~l~~~~~g~f~~~~~~w~~r~vGd~~tnp~psf~g~~is~v~f~q~RL~f~s----~~~v~~Srtg 549 (976) T protein:vir:10 475 SRNI-EFDKGTMPIQLVRQANGTFTVSQATWQNAEVGDELTNPNPSFVGKTINQLVFFRNRLVFLS----DENVIMSRPG 549 (976) T ss_pred cccc-ccccccccEEEEecccCeEEeeeccccccccCCcccCcCceecccccceEEEEcceEEEec----CCeEEEEecC Confidence 7543 3345779999999999999999888864 5778776 789999999997 5689999999 Q ss_pred Cccccccccc--CCCCCcEEEEEcCCCceEEEEEeec-CcEEEEecCcEEEEecCCCccccccceEEEEeecccCc-ccc Q lcl|Aclame:pro 348 DYKDFGKSNP--TQDDDRIIYTYAGRQVNEIRHLIDV-GSLVALTSGGEYVITGDQNKVLTPSSFAFSSQGSNGSS-NVP 423 (823) Q Consensus 348 dy~nF~~~t~--~~DdD~I~~~~~~~~~~~i~~~v~~-~~Ll~~t~~~q~~l~~~~~~~lTP~~~~i~~~s~~g~~-~~~ 423 (823) |||||+++++ +.|||||+++++++++++|+|++++ ++|+|||+++||+|+++ +++|||+|++++++|+|+|+ .|+ T Consensus 550 d~~nF~~~t~~~~~DdD~I~~~~ss~~~~~i~~~v~~~~~L~l~T~g~e~~lsg~-~~~lTP~t~~i~~~s~~~~~~~v~ 628 (976) T protein:vir:10 550 EFFNFWSKTATTFTPQDVIDLSCSSTYPAIVYDGIQVNAGLLLFTKNQQFMLTTD-SDILSPETAKINAVSSYNFNEKTH 628 (976) T ss_pred CccccccccccCCCCCccEEEEecCCcceeeEEEEecCCcEEEEecCceEEEecC-CceecceeEEEEEEEeeeccCCCc Confidence 9999999974 5699999999999999999999998 58999999999999975 46999999999999999875 699 Q ss_pred cEEeCCeEEEEecCCC--EEEEEEeeccccceeecchHHHHHHhcCCCceEEEEEcCCCcEEEEEEeCCCeEEEEEEe-- Q lcl|Aclame:pro 424 PIAVANIALFVQEKGS--VVRDLAYSFDVDGYQGNDLTILANHLFQKHSIVDWCFSIVPYSSAFCIRDDGKLLVMTYL-- 499 (823) Q Consensus 424 Pv~vg~~v~f~~~~g~--~v~e~~~~~~~d~~~~~dlt~~~~hl~~~~~~~~~a~~~~p~~~~~~~~~dg~l~~~ty~-- 499 (823) |+.+|++++|++++|+ +++||.|+.++++|.+.|||+|++||+++ .+..++++++|.+++|+++++|+|++|+|+ T Consensus 629 Pv~vG~~v~Fv~~~g~~~r~~~~~~~~~~~~~~~~dlt~~~~~l~~g-~~~~~a~~~~~~~vv~~~~~~g~l~~~ty~~~ 707 (976) T protein:vir:10 629 PVSLGTTVAFIDNANQFTRFFEMSNVVRQGEPDVVDQSKVISRLLDK-NISLVSVSRENSVVFFSQKDTDKIYCFRYFTS 707 (976) T ss_pred cEEeCCeEEEEecCCCeEEEEEEeecccccccchhHHHHHhhhhcCC-ceEEEEEcCCCcEEEEEEcCCCEEEEEEEeec Confidence 9999999999999997 45577778888999999999999999997 466799999999999999999999999997 Q ss_pred -ccccceeEEeeccCCceEEEEEEecCCCCEEEEEEEecCCCcEEEEEEeeccccCCccc--ceeEeeeeeEEeccccce Q lcl|Aclame:pro 500 -RDQQVFAWAPQSSTGKYESTCSISEGNEDAVYFVVNRTVNGQTVRYIERLSSRLFTSDE--DAFFVDSGLSYDGRNTSD 576 (823) Q Consensus 500 -~~q~v~aW~~w~~~g~~~~~~~~~~~~~d~l~~~v~r~~~g~~~~~~e~~~~~~~~~~~--~~~~lD~~~~y~~~~~~~ 576 (823) +||+|+|||||+|+|+|++||++ +|++||+|+|+++|+..||+|+|++..+.... +.++.|++..| T Consensus 708 ~~eq~v~aWsr~~~~G~v~sv~~i----~D~ly~vV~r~~~g~~~r~~e~~~~~~~~~~~~~~~~~~~~~~~~------- 776 (976) T protein:vir:10 708 GEKRLLQAWTTWTITGNIQYHCML----DDALYVVTRNNNKDQIVKYSLKLDDAGHFVTDTQGTTSTDDDSIY------- 776 (976) T ss_pred CCceeEEeeEEEecCCcEEEEEEe----CCeEEEEEEecCCeEEEEEEEEECCccceeeeccCccccccCCcc------- Confidence 78999999999999999999998 68999999999999999999999865432221 22222222211 Q ss_pred eeeEeeccccCcCccCcceEEe-cCCeEEcccccccEEEecccCceeEeeeEEEEEEEEeeEEecCCCceeeEecceeee Q lcl|Aclame:pro 577 RTMTITGGSGEWDYLAEYTISV-SGGAYFTSSDVGAQLQFPYTGADPDTGYEVSKELRCDIISVTSNTAVVVRANRNVPP 655 (823) Q Consensus 577 ~~~~~~~~~~~l~~~~~~~v~~-~dg~~~~~~~vgg~i~l~~~~~~~~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 655 (823) ..|++.+...+ +++.+ ....+-..+.+ T Consensus 777 -----------~~~lD~~~~~~~~~~t~-~~~t~~t~~~~---------------------------------------- 804 (976) T protein:vir:10 777 -----------RVHLDHSSSVTAASNTY-NTTTIKTTIPK---------------------------------------- 804 (976) T ss_pred -----------eeeeccceEEEeccccc-cCCceeEEeec---------------------------------------- Confidence 12333332221 22111 11100000000 Q ss_pred eeeeeeeecccccceeeecccccccceEEEEeCCce----eCCEEEcCCEEEecC--CCcEEEECcccceEEEEcceecC Q lcl|Aclame:pro 656 SLRNVATTNWQMARRTFGGLSHLEGQTVNILSDANV----EPQKVVSGGAVTLES--PGAVVHIGLPITAEFETLDININ 729 (823) Q Consensus 656 ~~~~~~~~~~g~~~~~~~gl~~l~g~~v~v~~dg~~----~~~~~v~~g~itl~~--~~~~~~~gl~~~~~~~~l~~~~~ 729 (823) ..+.+++++-+.+.+|+.. +...+|++|.++|+. +++++||||+|+++++++||++. T Consensus 805 -----------------~~~~~~~~~~~~~~~d~~~~~~~~~~~~v~g~~i~l~g~~~~~~v~VGl~Y~s~~~~~~~~i~ 867 (976) T protein:vir:10 805 -----------------PNGYESTKQLVAYDTDAGNDLGRYALVTVSGSNLEIPGNWSNNSFIIGYLYEMDVQLPTLYVT 867 (976) T ss_pred -----------------CccccCceeEEEEecccCcccccceeeeecCCeeEecCCCCCCeEEEeeeeEEEEeecceeEE Confidence 0122223344444445433 234567899999974 78899999999999999999874 Q ss_pred C---CCcccc--cceeEeeEEEEEEccccEEEecCCCceeE----eeccC-CCcCCCCCCcccceEEEEecCCcCCccEE Q lcl|Aclame:pro 730 G---QETLLD--KKQVIPSVTLVVNASRGIWATTPGGKWYE----YPQRE-FEFYDDPVDDATGKVEVKLDSNWGKNGRV 799 (823) Q Consensus 730 ~---~~~~~~--~~~~i~~~~~~~~~s~~~~~~~~~~~~~~----~~~~~-~~~~~~~~~~~tg~~~~~~~~~~~~~~~~ 799 (823) . .+.... -+.+|+++++++.+|.++.+......-.+ .+.+. ......+++++++..+..+..+|+++++| T Consensus 868 ~~~g~~~~~~~~gRl~i~r~~~~~~~tg~~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~~~~vP~~~~~~~~~v 947 (976) T protein:vir:10 868 QQVGDKYRSDAKSSLIVHRIKFSFGPLGVYSTTIQRDGKPDFTETKELGLAGVVGASRLPIVPEVIETVPCYERNTNLKV 947 (976) T ss_pred eCCCCcccccceeeEEEEEEEEEeecccceEEEEcCCCCccccccccccccCcccccccceecCcEEEEEeccCCceeEE Confidence 3 232222 13478999999999999887654322111 12222 23345567788888665555789999999 Q ss_pred EEEEcCCCCEEEEEEEEEEEecCC Q lcl|Aclame:pro 800 KIRQLDPLPLSVLAVIPRLTVGGF 823 (823) Q Consensus 800 ~i~q~~P~P~tvla~~~~~~~~g~ 823 (823) +|+|++|||||||||..|...|=. T Consensus 948 ~i~~d~PlP~tilsi~~eg~yn~r 971 (976) T protein:vir:10 948 NVKSEHPAPATLYSLAWEGDFTNR 971 (976) T ss_pred EEEECCCCceEEEEEEEEEEeccc Confidence 999999999999999999998877 No 25 >protein:vir:1778 Length: 680 # NCBI annotation: tail protein A # Family: family:all:825 # MgeID: mge:38 # MgeName: P60 # Cross-refs: genbank:acc:NP_570344;genbank:gi:18640503;genbank:GeneID:932716 Probab=100.00 E-value=2.9e-103 Score=582.76 Aligned_cols=502 Identities=15% Similarity=0.159 Sum_probs=339.3 Q ss_pred Cc-eeeeecccccccccccccccchHHHHHHHHhhhhcceeeecCCceecCcceeeeeecCCCCCceEEEEEECCCCeEE Q lcl|Aclame:pro 1 MA-ISWIQPSFAGGEIGPSLYGRIDMAKYQVALRKCDNFIVRQYGGVENRPGTRFVGAAKYPNRKCRLIPFQFSTVQTYA 79 (823) Q Consensus 1 M~-~~~~q~sF~~GElsP~l~~r~Dl~ry~~q~~~~~N~~~~~~GGl~rRPGt~fva~~~~~~~~~rLipF~~~~~~~Y~ 79 (823) |+ +.+..+||.+| ++++.|.+|+++||++|+||+|+|+.||+||||++||+.|...+....+++++|+++++|+ T Consensus 1 M~~v~~si~nl~~G-----vSqQp~~~r~pgQ~~~q~N~~~d~v~Gl~kRpg~~~i~~l~~~~~~~~~~~~~rd~~e~~~ 75 (680) T protein:vir:17 1 MAAVEQMVPNLLGG-----ISQQPDPLKLPGQVKQARNVQLDPTFGALKRPGTELIMQVTGIPKRAKWIPIMRDAREHYY 75 (680) T ss_pred CccceecchhhhCc-----ceecchhhcCcchhhhhhccccCcCcccccCccceeeeeccCCCCCceeEEEecCCCCeEE Confidence 99 68899999999 9999999999999999999999999999999999999999877778888888999999999 Q ss_pred EEEeCCe--------EEEEECC-ce---EeeccccceEEeccccccccceeEEEEeCcEEEEEeCCceEEEEEEcCCCCc Q lcl|Aclame:pro 80 LEFGHQY--------MRVIKDG-AL---VLNSSNVIYEIATPYTEADLFRIKFTQSADVLTLVHPAYPPKELRRYAHDNW 147 (823) Q Consensus 80 l~fg~~~--------irV~~~~-g~---v~~t~~~~~~~~tPyt~~~l~~L~~~qsaD~~fIvn~~~~p~~l~r~~~~~w 147 (823) +.+.... ||||+.. |. |....+.++. ..|-+.++..+||+++++|++||+|+++.|+.-.... +.+ T Consensus 76 ~~~~~~g~~~~~~~~i~v~d~~~G~~~~v~~~~~~~~~-~~~~~~~~~~~lr~~tv~d~tfi~N~~v~~~~~~~~~-~~~ 153 (680) T protein:vir:17 76 VAIYREGANESGDLRIRVFDLKAGVERAVSFVGGEVEE-YFPGDETDWEAIRSLTIGDYTFLSNPNVQPTTWSRSF-SRR 153 (680) T ss_pred EEEEcCCCcccccceeEEEEccCCeEEEEEcCCCceEE-EeecCCCCccceEEEEEcCEEEEECCeEEEeccCCCC-CCC Confidence 9997554 9999974 42 2222222222 2233455667999999999999999999986443211 111 Q ss_pred eeeeEEEecc-cc-----ccccccc-----------------------------------eEEE-------Eeccc---- Q lcl|Aclame:pro 148 QLVDVVTKNG-PF-----EDINIDE-----------------------------------SLTV-------YASAS---- 175 (823) Q Consensus 148 s~~~~~f~~~-p~-----~~i~~~~-----------------------------------s~t~-------t~~a~---- 175 (823) .- .+.+... .+ ..++... ..+. ..... T Consensus 154 ~~-g~~~v~~~ayg~ty~v~ing~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Ag~~t~~~~~~a~la~~l~~~~~~~~~ 232 (680) T protein:vir:17 154 PE-GLVTIGAAGYGTSYIVDFATEDSGQQRRWAVQEMQAPKTKRKKGDGSPDEAGETTVNNWNGTGLSFRVKVEARAFLV 232 (680) T ss_pred Ce-eEEEEEEeeeeeEEEEEEeccccceeeeeeeeeeeccccccccccccCCCCcceeeeeeeeeeeeeeeeeccceeee Confidence 11 1111110 00 0000000 0000 00000 Q ss_pred --CCceee--e------cc-------ccccccccccceEEE--cccc------cceecceee-----------e------ Q lcl|Aclame:pro 176 --TGTITL--T------AS-------ASIFGAEQVGKLFYL--EQPA------VDSVPVWET-----------S------ 213 (823) Q Consensus 176 --t~~~Tv--t------as-------~~~~~a~~vg~~~~~--~~~~------~~~~~~~~~-----------~------ 213 (823) ...+.. . .. ...+....-|..+++ .... .+......+ . T Consensus 233 ~~g~~~~~~y~~~~~l~~tg~~~~~~~~t~~v~~~G~~y~IsI~~~~~~~~~~~~~s~~~~t~~~~~a~~at~~~Ia~~L 312 (680) T protein:vir:17 233 DDGEEYGHNYIPYVTLLTPGNNTSPFPDTIRVDVSGEGWDIKVTKQIQSKVYANLGTAQFTTPVDQSGGGASTSDIVTGL 312 (680) T ss_pred cCCCceEEEEeeEEEEecCCccccccCceEEEecccceeEEEEccceeeEeccCccceeeeeccCCcccceeHHHHHHHH Confidence 000000 0 00 000000000100111 0000 000000000 0 Q ss_pred ----eeeeeeeeEEeccce-ee-------------------------eE-ecccceeecccccCceEEEEeceeccccce Q lcl|Aclame:pro 214 ----KSTSIGDIRRADSNY-YR-------------------------AV-TAGKTGTLRPSHTEGTSWDGWGGSGDDDTG 262 (823) Q Consensus 214 ----~~~~~~~~~~~~~~~-~~-------------------------~~-~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (823) .........+ .+++ +. .+ ...+...-.|......+...+.+....... T Consensus 313 ~~~i~~~~~~~~~~-~g~~i~i~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~v~~~~~Lp~~a~~g~~v~v~~~~~~~~~ 391 (680) T protein:vir:17 313 SAAINGLGTFTAES-IGNVIRVRYSDPTRTDEFTMSARGGTSGTGLESIKYSVDTLAELPTKCWNDYQVAVRNTQDTEVD 391 (680) T ss_pred HHhhcccCcEEEEE-CCCEEEEEeccCCCceEEEeeccCCCCceeeeeeeeeeccccccccccCCCcEEEEEeCCCCccc Confidence 0000000000 1111 10 00 000111111222222222333333333322 Q ss_pred EEEEEEe--------cCccEEEEEEecCccccccEEEEeeccccccccCcceeccc-------Cccc-------C----- Q lcl|Aclame:pro 263 IEWEYLH--------SGFGIARITAVNGTTATAEVISYIPSQVVGEDNASYKWAKY-------AWNS-------V----- 315 (823) Q Consensus 263 ~~~~~~~--------~~~g~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~-------~w~~-------~----- 315 (823) ..|..+. ...+.|.|+..++... .....+||+.+++...+.|.+... .|.+ + T Consensus 392 ~Yyv~~~~~~~~~~~~~~~~W~E~~~~~~~~-~~~~~tmp~~l~r~~~g~f~~~~~~~~~~~~~~~~r~~Gdd~tnp~ps 470 (680) T protein:vir:17 392 DYYVKFETDVEDADVPGSGYWVETVKNGDDG-GLVDDTMPHVLVRNALGDFTFSSLNNSSYGKTWADRSVGSEDTNPHPT 470 (680) T ss_pred ceEEEEeccCcccCcccccceeecccCcccc-eeccCcceEEEEEccCceeEEEeeccccccccccccccCCcccCCCcc Confidence 2332222 2456899887766543 334567999999888877765543 2543 2 Q ss_pred ----CCCccEEEEEeceEEEEeCcCCCcEEEEEcccCccccccccc--CCCCCcEEEEEcCCCceEEEEEeecC-cEEEE Q lcl|Aclame:pro 316 ----NGYPGTVVYYQQRLYFAASTAFPQTIWASRTGDYKDFGKSNP--TQDDDRIIYTYAGRQVNEIRHLIDVG-SLVAL 388 (823) Q Consensus 316 ----~g~Ps~v~f~q~RL~f~~~~~~p~~V~~Sr~gdy~nF~~~t~--~~DdD~I~~~~~~~~~~~i~~~v~~~-~Ll~~ 388 (823) +.||++|+||||||+|++ |++|||||+|||+||+++++ ++|||||++++++++++.|+|+++++ +|+|| T Consensus 471 F~~~G~~p~~v~f~q~RL~f~s----~~~v~~Srtgd~~nF~~~t~~~~~DdD~I~~~~ss~~~~~i~~~v~~~~~L~l~ 546 (680) T protein:vir:17 471 FTESGNGIYGMFMYKNRLGFLT----QDAVIMSQVGDYFNFYATSGVTISDADPIDMATSDTKPVKLEAAISSTSGAILF 546 (680) T ss_pred cccCCCCceEEEEEcceEEEee----CCeEEEEccCCcccccccccccCCCCccEEEEEcCCcceeeeEEeecCCcEEEE Confidence 446888899999999997 56899999999999999985 46999999999999999999999985 79999 Q ss_pred ecCcEEEEecCCCccccccceEEEEeecccCc-ccccEEeCCeEEEEecCCC--EEEEEEeeccccceeecchHHHHHHh Q lcl|Aclame:pro 389 TSGGEYVITGDQNKVLTPSSFAFSSQGSNGSS-NVPPIAVANIALFVQEKGS--VVRDLAYSFDVDGYQGNDLTILANHL 465 (823) Q Consensus 389 t~~~q~~l~~~~~~~lTP~~~~i~~~s~~g~~-~~~Pv~vg~~v~f~~~~g~--~v~e~~~~~~~d~~~~~dlt~~~~hl 465 (823) |+++||+|+++ +++|||+|++++++|+|+|+ .|+|+.+|+.+||++++|+ +||||.|++++|+|++.|||+|++|| T Consensus 547 t~g~q~~ls~~-~~~lTP~~~~i~~~s~~~~~~~~~Pv~vG~~v~Fv~~~g~~s~vre~~y~~~~d~y~a~DlT~~a~hl 625 (680) T protein:vir:17 547 GNQAQFRLSSP-DESFGPKTATLDKISNYTYESKADPVQTGVSMIFPTNMGTYSSVYELSTESAKGTPVIEDSSRVIPRL 625 (680) T ss_pred ecCeEEEEecC-CceecceeEEEEEEEeecccCCCCceEeCCeEEEeecCCCcceEEEEeeeeccCceehhhHHHHHHHh Confidence 99999999975 57999999999999999875 6999999999999999985 79999999999999999999999999 Q ss_pred cCCCceEEEEEcCCCcEEEEEEeCCCeEEEEEEe---ccccceeEEeeccCCceE Q lcl|Aclame:pro 466 FQKHSIVDWCFSIVPYSSAFCIRDDGKLLVMTYL---RDQQVFAWAPQSSTGKYE 517 (823) Q Consensus 466 ~~~~~~~~~a~~~~p~~~~~~~~~dg~l~~~ty~---~~q~v~aW~~w~~~g~~~ 517 (823) |++..+..++++++|..++|+.++||+|++|+|+ +||+++|||||+|++.=+ T Consensus 626 ~~g~v~~~~~~~~~~~~~~~~~~~~~~l~~~~yl~~~~e~~v~aW~rw~~~~~d~ 680 (680) T protein:vir:17 626 IPSGLTWSTASMNNDTVFFGNAKKGRNVYVFRFFNEGQERKVAGWTTWYYEDQDH 680 (680) T ss_pred cCCceEEEEeeCCCCeEEEEEEcCCCEEEEEEEeeCCCceEEEEEEEEecCCCCC Confidence 9999889999999999999999999999999997 788999999999987532 No 26 >protein:vir:80177 Length: 1027 # NCBI annotation: tail tubular protein B # Family: family:all:12083 # MgeID: mge:1878 # MgeName: Pf-WMP3 # Cross-refs: genbank:acc:YP_001285795;genbank:gi:148747829;genbank:GeneID:5220453 Probab=99.83 E-value=4.6e-20 Score=126.57 Aligned_cols=777 Identities=18% Similarity=0.208 Sum_probs=333.2 Q ss_pred Cceeeeecccccccccccc--cccchHHHHH-----HHHhhhhcceeeecCCceecCcceeeeeecCCCCCceEEEEEEC Q lcl|Aclame:pro 1 MAISWIQPSFAGGEIGPSL--YGRIDMAKYQ-----VALRKCDNFIVRQYGGVENRPGTRFVGAAKYPNRKCRLIPFQFS 73 (823) Q Consensus 1 M~~~~~q~sF~~GElsP~l--~~r~Dl~ry~-----~q~~~~~N~~~~~~GGl~rRPGt~fva~~~~~~~~~rLipF~~~ 73 (823) |--..-.+.=.+-||.|+- .+..|+..-+ .+---..|+-++..|.+.||-||..+.+-.+ ..++.-+|..-- T Consensus 1 mvnsferrtQQ~~dlG~~s~~F~GL~~t~S~~~IP~~~SP~~~N~DV~~~G~V~kR~GT~i~~~Y~~-t~~~~t~~vks~ 79 (1027) T protein:vir:80 1 MVNSFERRTQQGDDLGIRSSNFGGLNTTASPLNIPYEDSPNLLNVDVDVSGNVSKRQGTEILLKYAN-TTPVYTFPVKSV 79 (1027) T ss_pred CCcchhhhhccccccccccccccccccccccccccccCCCceEEeecccCcceeehhhhhhhhhhcc-CCceeeeeehhh Confidence 4433333333456666664 3444544222 2234578999999999999999999877643 223333333222 Q ss_pred CCCeEEEEEeCCeEEEEECCceEeeccccceEEecc-----ccccccceeEEEEeCcEEEEEeCCceEEEEE---Ec-C- Q lcl|Aclame:pro 74 TVQTYALEFGHQYMRVIKDGALVLNSSNVIYEIATP-----YTEADLFRIKFTQSADVLTLVHPAYPPKELR---RY-A- 143 (823) Q Consensus 74 ~~~~Y~l~fg~~~irV~~~~g~v~~t~~~~~~~~tP-----yt~~~l~~L~~~qsaD~~fIvn~~~~p~~l~---r~-~- 143 (823) -+-.|+|.-..|-+.+.-..+ +..+.+.+++.- |+..+-.- -..-.-|.+.|+-+.+||.++. |. + T Consensus 80 LG~dYvLt~~~GLL~~~~~~~---~AVG~~K~~s~V~~aa~~~V~P~F~-~~S~~~~R~LILT~~~~~VQ~~F~E~T~t~ 155 (1027) T protein:vir:80 80 LGYDYVLTKSGGLLEVAGVIG---KAVGAYKSFSNVFSAAAANVKPYFT-LLSDVEPRVLILTGTNTPVQVKFVEQTFTT 155 (1027) T ss_pred ccceeeEecCCceEEEeeecc---cccccchhhhhhhhhhhcccCceeE-EccCCCCcEEEEcCCCceEEEEEeeeeeee Confidence 334465544444443332222 112223333222 22111111 1112346788888888876543 11 1 Q ss_pred --CCCceeeeEEEecccc-----ccccccceEEEEecccCCceeeeccc-ccccccccc--------------------- Q lcl|Aclame:pro 144 --HDNWQLVDVVTKNGPF-----EDINIDESLTVYASASTGTITLTASA-SIFGAEQVG--------------------- 194 (823) Q Consensus 144 --~~~ws~~~~~f~~~p~-----~~i~~~~s~t~t~~a~t~~~Tvtas~-~~~~a~~vg--------------------- 194 (823) ..+-...-+.+...-. .-.+.+.+.-++.+.......++.+. +-|.-.+.+ T Consensus 156 T~~s~~~~~V~~~~s~~~~~~~~L~~~~N~tS~~~~~~~~T~~AlT~~NlP~~S~~mt~~~V~~~W~WWAESl~~~G~~~ 235 (1027) T protein:vir:80 156 TSGSPTTTVVIPNASRFQYDTPILYMNRNFTSGATYSYNSTTRALTISNLPSWSGSMTFDLVLPVWSWWAESLRWFGDRF 235 (1027) T ss_pred eccCCccceEeecccceeecCeeEEecccccceeEeeccceEEEEEeccCCcceeEEEEeEEecchhhhhhHHhhhhhHH Confidence 0110111111111100 00111111112222211112222211 111110000 Q ss_pred ----ceEEEcccc---------cceec-ceeeeeeeee--e---------------------eeEEeccceeeeEec--- Q lcl|Aclame:pro 195 ----KLFYLEQPA---------VDSVP-VWETSKSTSI--G---------------------DIRRADSNYYRAVTA--- 234 (823) Q Consensus 195 ----~~~~~~~~~---------~~~~~-~~~~~~~~~~--~---------------------~~~~~~~~~~~~~~~--- 234 (823) ..|.+..-. ...++ ...+...+.. . ...-.++..+...+. T Consensus 236 ~~~~SRFNV~~~DQ~V~IP~~L~sDlD~i~~~~~~~~m~~~~ta~F~~~~~~~~T~~P~~AD~YG~~~G~~~~~~~~A~L 315 (1027) T protein:vir:80 236 YDAVSRFNVNKADQSVAIPAALRSDLDTIQGTYGRYPMLLYKTATFNDTYTFSNTGQPANADSYGWGDGSVYNVGASAYL 315 (1027) T ss_pred HhhhhhcccccccccccchhHHhhhhhhhhhccCCccEEEEEeeeecCceeecCCCCCCCcccccccCCceEeeccccee Confidence 000000000 00000 0000000000 0 000001111111100 Q ss_pred ---------cc--ceeecccccC------ceEEEEeceecccc-------ceEEEEEEecCccEEEEE------------ Q lcl|Aclame:pro 235 ---------GK--TGTLRPSHTE------GTSWDGWGGSGDDD-------TGIEWEYLHSGFGIARIT------------ 278 (823) Q Consensus 235 ---------~~--t~~~~~~~~~------~~~~~~~~~~~~~~-------~~~~~~~~~~~~g~~~~t------------ 278 (823) |. +++-+|.... ....+.-.++...+ +...|++-....|.-+.. T Consensus 316 ~~sPFF~TFG~~~t~TP~P~~~V~lLR~RELRFN~G~GA~~~~L~V~~D~~~~s~N~ssT~~~T~R~~~L~~A~G~~~~~ 395 (1027) T protein:vir:80 316 NTSPFFATFGDTRTPTPQPPETVHLLRQRELRFNYGNGATGANLRVTVDGTALSANYSSTVAGTNRAYALYKADGTLCTS 395 (1027) T ss_pred eccceEEEeccccCCCCCchhheeeeeeeeeeeccCCCCCCcceEEEEcceeeeeeeeeeeeecceeEEEeeeccccccc Confidence 00 0000000000 00000001111110 111111111111111100 Q ss_pred --------EecCcc-----------ccccEEEEeeccccccccCcce------ecccCccc--CCCCccEEEEEeceEEE Q lcl|Aclame:pro 279 --------AVNGTT-----------ATAEVISYIPSQVVGEDNASYK------WAKYAWNS--VNGYPGTVVYYQQRLYF 331 (823) Q Consensus 279 --------~~~~~~-----------~~~~~~~~~~~~~~~~~~~t~~------~~~~~w~~--~~g~Ps~v~f~q~RL~f 331 (823) ++.+.+ ..+..-..+-....+++.++.+ +..+.|.+ ++.+|+-.+.||.||++ T Consensus 396 A~dlayY~A~~GATPL~IS~~aA~t~~~~~R~yi~~~~~~T~~~~~~G~Y~k~YGlG~~~~Y~~~~F~~I~TvY~~RLvL 475 (1027) T protein:vir:80 396 ASDLAYYIAFTGATPLGISPTAAVTITNVDRTYIGSAATQTDNAYVQGGYFKVYGLGLWANYGTGQFPRIATVYQSRLVL 475 (1027) T ss_pred cccceeeeeeeccccccccccceeeeecCceeeeeeeccccCCceEeeeEEEEEEeeeeeecCCccccceeeeeeeeeEE Confidence 011110 0000000011111112222211 33344544 56789999999999999 Q ss_pred EeCcCCCcEEEEEcccC------cccccccc-cCC--CCCcEEEEEcCCCceE-EEEEeec-CcEEEEecCcEEEEecCC Q lcl|Aclame:pro 332 AASTAFPQTIWASRTGD------YKDFGKSN-PTQ--DDDRIIYTYAGRQVNE-IRHLIDV-GSLVALTSGGEYVITGDQ 400 (823) Q Consensus 332 ~~~~~~p~~V~~Sr~gd------y~nF~~~t-~~~--DdD~I~~~~~~~~~~~-i~~~v~~-~~Ll~~t~~~q~~l~~~~ 400 (823) .+..+.|..+.+|.+|| ++||+.-+ -++ |+||+++.+++.|... |..++.- +.|++||..+-|.+.|+ T Consensus 476 ~~~t~~~~~~~~S~~GD~~~~G~~Y~F~QvTD~L~G~~sDPF~L~VsSsq~~d~vT~~~~WQ~~LFV~T~~~T~~~~GG- 554 (1027) T protein:vir:80 476 GGFTNDPTRVVFSATGDTVEGGVKYNFFQVTDDLDGLDSDPFDLVVSSSQADDYVTGLVEWQSSLFVLTRRATFRANGG- 554 (1027) T ss_pred eccCCCcceEEEeecCCcccCceeeeeeeeehhhccCcCCceeEEEecccccceeeeeeeeceeEEEEecceeEEeecC- Confidence 99999999999999887 78888655 233 8999999999977554 6666664 58999999999999986 Q ss_pred CccccccceEEEEeecccC-cccccEEeCCeEEEEecCCCEEEEEEeeccccceeecchHHHHHHhcCCC------ceEE Q lcl|Aclame:pro 401 NKVLTPSSFAFSSQGSNGS-SNVPPIAVANIALFVQEKGSVVRDLAYSFDVDGYQGNDLTILANHLFQKH------SIVD 473 (823) Q Consensus 401 ~~~lTP~~~~i~~~s~~g~-~~~~Pv~vg~~v~f~~~~g~~v~e~~~~~~~d~~~~~dlt~~~~hl~~~~------~~~~ 473 (823) +..++|..-.++.+|++|. +.-.-|+..-.|+|.++.| ++++...-+.|+|++.+-|+-+..+|.+- .... T Consensus 555 d~t~~~a~~~VN~iSs~G~~N~~~VV~T~~~V~Yl~~~G--~F~L~~r~~~~~Y~A~EkSiKIR~~F~~~~~ta~~~~~W 632 (1027) T protein:vir:80 555 DATISPARRFVNYISSLGLVNPFSVVRTDTAVFYLSDSG--VFNLTPRVEDGEYQAIEKSIKIRKVFGKTTSTAVSSAAW 632 (1027) T ss_pred ccccchhHHHHHHHHhhcccCcceEEEeeeEEEEeeccc--eeeccCCccCCcchhhhhhhhhhhhhhhhccccccceee Confidence 5679999999999999997 5455677888999999988 99999999999999999999999998651 1222 Q ss_pred EEEcCCCcEEEEEEeCCC-------eEEEEEEeccccceeEEeeccCCceEEEEEEecC---CCCEEEEEEEecCCCcEE Q lcl|Aclame:pro 474 WCFSIVPYSSAFCIRDDG-------KLLVMTYLRDQQVFAWAPQSSTGKYESTCSISEG---NEDAVYFVVNRTVNGQTV 543 (823) Q Consensus 474 ~a~~~~p~~~~~~~~~dg-------~l~~~ty~~~q~v~aW~~w~~~g~~~~~~~~~~~---~~d~l~~~v~r~~~g~~~ 543 (823) +.|.++ ..++++....| .+|.|-+.+ .+|+..++.|.|+--...|.. ..|...+.|. -|.++ T Consensus 633 m~~~q~-~~~LYv~L~~~~eT~~~S~~~~~N~~~----DSWt~~~t~~~Fk~YtghP~V~~~~~~s~L~~v~---~~~TV 704 (1027) T protein:vir:80 633 MSFDQN-RKVLYVALPRGSETTVASALYVYNTFR----DSWTQYDTLGGFKTYTGHPYVDTVLGDSFLLMVA---YGGTV 704 (1027) T ss_pred eeeccC-CceEEEEecCCCcchhhhhhhhhhhhh----cchhhhhcccCcccccCCchhhhhhhhhhhhhhc---Cchhh Confidence 333332 22222222211 122222211 378888887877655444422 2332222222 24455 Q ss_pred EEEEeeccccCCcccceeEeeeeeEEeccccceeeeEeeccccCcCccCcceEEecCC--------------eEEccccc Q lcl|Aclame:pro 544 RYIERLSSRLFTSDEDAFFVDSGLSYDGRNTSDRTMTITGGSGEWDYLAEYTISVSGG--------------AYFTSSDV 609 (823) Q Consensus 544 ~~~e~~~~~~~~~~~~~~~lD~~~~y~~~~~~~~~~~~~~~~~~l~~~~~~~v~~~dg--------------~~~~~~~v 609 (823) ++|..-.+++. -||--|| ++++..-++.........+.|..+.-..+++.+- .+.+.+-+ T Consensus 705 ~ML~~~~~~Yv-----DFF~~CG-~~~~~Vlt~~~GIY~~~~P~wnsP~I~~~svs~tt~~~~q~Ye~~T~~~vvpydnv 778 (1027) T protein:vir:80 705 CMLKLYGSRYV-----DFFNKCG-SFTGNVLTANSGIYTWTAPFWNSPVISNISVSGTTTLAVQRYELPTDLQVVPYDNV 778 (1027) T ss_pred hhhhhhcchhh-----hhhhhcc-cceeeEEecCCceeEeecccccCCeeeEEEeeccchhhhheecccccccccccccc Confidence 55443222221 0233343 3333332222211111111222211111122110 11111111 Q ss_pred -ccEEEecccCceeEeeeEEEEEEEEeeEEecCCCceeeEecceeeeeeeee-eeecccccceeeecccccccceEEEEe Q lcl|Aclame:pro 610 -GAQLQFPYTGADPDTGYEVSKELRCDIISVTSNTAVVVRANRNVPPSLRNV-ATTNWQMARRTFGGLSHLEGQTVNILS 687 (823) Q Consensus 610 -gg~i~l~~~~~~~~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~g~~~~~~~gl~~l~g~~v~v~~ 687 (823) +-.|-.. +.....|-+-....+.. ++. ++.+.+.....|+.+-..+ ..++.. .+....++|+++. T Consensus 779 edlsiyvn--GT~Ls~~~~~~~~~~~i--~LL-~~~~~~~~~s~Vprcpvnvsy~~~~~--------~~~TT~~TV~~N~ 845 (1027) T protein:vir:80 779 EDLSIYVN--GTRLSFGTDWVKQGKAI--YLL-SDPGDGKTVSIVPRCPVNVSYQGDVT--------FDETTAQTVWVNN 845 (1027) T ss_pred ccceeeec--ceeEeecCchhhcCCEE--EEe-cCCCCcceEEEEeccccccccccccc--------ccccccceEEecc Confidence 1111111 11111111111111111 111 1111122222233222221 122222 2334457888876 Q ss_pred CCceeCCEEEcCCE-EEecC--CCcEEEECcccceEEEEcceecCCCCcccccceeEeeEEEEEEccccEEEe------- Q lcl|Aclame:pro 688 DANVEPQKVVSGGA-VTLES--PGAVVHIGLPITAEFETLDININGQETLLDKKQVIPSVTLVVNASRGIWAT------- 757 (823) Q Consensus 688 dg~~~~~~~v~~g~-itl~~--~~~~~~~gl~~~~~~~~l~~~~~~~~~~~~~~~~i~~~~~~~~~s~~~~~~------- 757 (823) -...+..-.+.+|. ++... .+.++++|..|.|..+..-+.+. +++|.||+.++.|.+.+---+-+= T Consensus 846 ~~~iQ~Tdy~~~GS~L~~~~~LtN~~~~~G~~Y~S~Y~SP~F~L~----SL~~LKk~K~~~L~~Dnedvlpvytigdlas 921 (1027) T protein:vir:80 846 LLQIQGTDYTLSGSTLTFTDTLTNAVVEVGNAYISYYQSPMFLLG----SLSNLKKVKHVYLYFDNEDVLPVYTIGDLAS 921 (1027) T ss_pred eeeeccceeeeccCccccccccccceEEEeecchhhhcchhhhhh----hhhhhhheeeeEEEEcCCcceeeeeeccccC Confidence 55555543344443 43332 37789999999999877655555 789999999999998764222111 Q ss_pred cC-CCce-eEeeccCCCc----CCCCCCcccceEEEEe----cCCcCCccEEEEEEcCCCCE----------EEEEEEEE Q lcl|Aclame:pro 758 TP-GGKW-YEYPQREFEF----YDDPVDDATGKVEVKL----DSNWGKNGRVKIRQLDPLPL----------SVLAVIPR 817 (823) Q Consensus 758 ~~-~~~~-~~~~~~~~~~----~~~~~~~~tg~~~~~~----~~~~~~~~~~~i~q~~P~P~----------tvla~~~~ 817 (823) .+ -+.| -..+-|.... +|... |-+....+ +.-|+.- .+ ..+|.-+ .+|++-.. T Consensus 922 gqdvddlvgkwktrananisvtydsen---tsetsydiysfsdlvwdna-ff---dvdptnlqstryalfkeallgvgyn 994 (1027) T protein:vir:80 922 GQDVDDLVGKWKTRANANISVTYDSEN---TSETSYDIYSFSDLVWDNA-FF---DVDPTNLQSTRYALFKEALLGVGYN 994 (1027) T ss_pred CCchhHhhhhhcccccceeEEEecCcC---cccceeeeeehhhhhcccc-ee---cccccccchhhHHhhhhhHhhcccc Confidence 10 0000 0011111100 11100 00000000 1112210 00 1122111 23444444 Q ss_pred EEecCC Q lcl|Aclame:pro 818 LTVGGF 823 (823) Q Consensus 818 ~~~~g~ 823 (823) ..+|=. T Consensus 995 yqigvw 1000 (1027) T protein:vir:80 995 YQIGVW 1000 (1027) T ss_pred eeeeee Confidence 444322 No 27 >protein:vir:94602 Length: 1012 # NCBI annotation: PfWMP4_35 # Family: family:all:12083 # MgeID: mge:1525 # MgeName: Pf-WMP4 # Cross-refs: genbank:acc:YP_762665;genbank:gi:115304373;genbank:GeneID:5142302 Probab=99.73 E-value=1.5e-16 Score=107.33 Aligned_cols=755 Identities=16% Similarity=0.165 Sum_probs=316.1 Q ss_pred Ccee---eeecccccccccccccccchHHHHH-----HHHhhhhcceeeecCCceecCcceeeeeecCCCCCceEEEEEE Q lcl|Aclame:pro 1 MAIS---WIQPSFAGGEIGPSLYGRIDMAKYQ-----VALRKCDNFIVRQYGGVENRPGTRFVGAAKYPNRKCRLIPFQF 72 (823) Q Consensus 1 M~~~---~~q~sF~~GElsP~l~~r~Dl~ry~-----~q~~~~~N~~~~~~GGl~rRPGt~fva~~~~~~~~~rLipF~~ 72 (823) |... -+|--|+.- .+..|+..-+ .+---..|+-++..|.+.||-||..+.+-.-.+.-.|...|.. T Consensus 1 mtqQQ~~eiqG~~t~~------F~GL~~s~S~~~IP~~~SP~~~N~DV~~~G~V~rR~GT~l~~~Y~inn~s~~~~s~~i 74 (1012) T protein:vir:94 1 MTQQQATEIQGPFTRE------FSGLDISNSVGAIPVSGSPVFHNCDVSDDGAVVRRRGTALVNTYNINNASGRAWSDTI 74 (1012) T ss_pred CCcccccccccccccc------ccccccccccccccccCCCceEEeecccCcceeehhhhhhhhhhcccccCcceeeeee Confidence 5422 122212111 2223332111 2233568999999999999999999887643234445555543 Q ss_pred C---CCCeEEEEEeCCeEEEEECCceEeeccccceEEecc-----ccccccceeEEEE---eCcEEEEEeCCceEEEEE- Q lcl|Aclame:pro 73 S---TVQTYALEFGHQYMRVIKDGALVLNSSNVIYEIATP-----YTEADLFRIKFTQ---SADVLTLVHPAYPPKELR- 140 (823) Q Consensus 73 ~---~~~~Y~l~fg~~~irV~~~~g~v~~t~~~~~~~~tP-----yt~~~l~~L~~~q---saD~~fIvn~~~~p~~l~- 140 (823) . ..+.|+|.-..|-+.+.-..+ +..+.+.+++.- |+..+ .++-|.- .-|.+.|+-+++||.++. T Consensus 75 rt~LG~eYfiLs~~~GLL~~~~~~~---~AVG~~K~~a~V~~ss~~~V~P-ssm~F~~~S~~~~R~LILT~~~~~VQ~~F 150 (1012) T protein:vir:94 75 RTKLGSEYFILSNDVGLLISLMRDD---EAVGMPKEVAVVSKSSIWTVPP-SSMCFIPVSAPYDRLLILTPEHPIVQLSF 150 (1012) T ss_pred hhhccceeEEEecCCceEEEeeecc---cccccchhhhhhhhhhccccCC-cceEEEeccCCCCcEEEEcCCCceEEEEE Confidence 3 223334444333333322221 122233333332 22211 1222332 345788888888886543 Q ss_pred --Ec-C---CCCceeeeEEEeccccc-----cccccceEEEEecccCCceeeeccccccccccccce------------- Q lcl|Aclame:pro 141 --RY-A---HDNWQLVDVVTKNGPFE-----DINIDESLTVYASASTGTITLTASASIFGAEQVGKL------------- 196 (823) Q Consensus 141 --r~-~---~~~ws~~~~~f~~~p~~-----~i~~~~s~t~t~~a~t~~~Tvtas~~~~~a~~vg~~------------- 196 (823) |. + .++-...-+.|...-.+ -.+.+.+.-++.++......++.+.+-|.-.+.+.. T Consensus 151 ~E~T~s~T~~t~~~~~V~~~~a~~~~~~~~L~~~~N~sS~~~~~~~~T~~AmT~~NP~~S~~ls~~~V~~qtytltirqi 230 (1012) T protein:vir:94 151 LERTLSFTCTTNHGGGVFSFTAPISVNDTTLWRDTNASSYIVTDAAGTVYAMTQKNPDFSFRLSGSFVVGQTYTLTIRQI 230 (1012) T ss_pred eeeeeeeeccCCccceEeecccceeecCeeEEecccccceeEeeccceEEEEEeeCCceeEEEEEEEecCcccceeehhh Confidence 21 1 11111111111111000 011111111222222222222222222211111000 Q ss_pred ----------------------EEEccc---------ccceec-ceeeeeeee--eeeeEEeccceee------------ Q lcl|Aclame:pro 197 ----------------------FYLEQP---------AVDSVP-VWETSKSTS--IGDIRRADSNYYR------------ 230 (823) Q Consensus 197 ----------------------~~~~~~---------~~~~~~-~~~~~~~~~--~~~~~~~~~~~~~------------ 230 (823) |.+..- -...++ ...+...+. +-...+.+++++. T Consensus 231 ~W~WWAESm~~~G~~~~~~~SRFNV~~~DQ~V~IP~~L~tDiD~v~~~~~~~~l~~~~ss~F~~~~~~~~T~~P~~AD~Y 310 (1012) T protein:vir:94 231 TWQWWAESMYYEGQDMMQNTSRFNVTSIDQNVKIPDRLITDIDPVYKNSQGLGLFVFWSSRFDSNGWAGPTTSPNTADEY 310 (1012) T ss_pred hhhhhhhhHhhhhhHHHhhhhhcccccccccccchhHHhhhhhhhhhccCCccEEEEEeeeecCceeecCCCCCCCcccc Confidence 000000 000000 000000000 0000011111100 Q ss_pred ------------------------eEeccc--ceeecccccC------ceEEEEeceecccc-------ceEEEE----- Q lcl|Aclame:pro 231 ------------------------AVTAGK--TGTLRPSHTE------GTSWDGWGGSGDDD-------TGIEWE----- 266 (823) Q Consensus 231 ------------------------~~~~~~--t~~~~~~~~~------~~~~~~~~~~~~~~-------~~~~~~----- 266 (823) .++-|. +++-+|.... ....+.-.++...+ +...|+ T Consensus 311 G~~~G~~~tpp~~~~~A~L~~aPFF~TFG~~~s~TP~P~~~V~iLR~RELRFN~G~GA~~~~L~V~~D~~~~t~Nnvpfs 390 (1012) T protein:vir:94 311 GFSGGGRFTPPSLVPGATLQAAPFFITFGGIYSGTPTPINQVNILRLRELRFNGGTGAKPDDLQVYNDTVEHTWNNVPFS 390 (1012) T ss_pred cccCCceeccccccccceeeccceEEEeccccCCCCCChhheeeeeeeeeeeccCCCCCCcceEEEEcceeeeccccccC Confidence 000000 0000000000 00000001111100 001111 Q ss_pred -------------------EEe------cCccEEEEEEecCccccccEE--------------EEeeccccccccCcce- Q lcl|Aclame:pro 267 -------------------YLH------SGFGIARITAVNGTTATAEVI--------------SYIPSQVVGEDNASYK- 306 (823) Q Consensus 267 -------------------~~~------~~~g~~~~t~~~~~~~~~~~~--------------~~~~~~~~~~~~~t~~- 306 (823) .+. .......+++.+....+.... .+.-..-.+++.++.+ T Consensus 391 psnfqt~atT~~~T~R~~~L~~A~G~~~~~A~Y~A~~GATnnlpanaPL~IS~~sA~s~~~~~R~v~~~~~~T~~~~~~G 470 (1012) T protein:vir:94 391 PSNFQTWATTYTATDRVITLMSAVGDRFNNANYFAILGATNNLPANAPLHISCLSASSYLGGSRRVWYRNLPTTGGTLDG 470 (1012) T ss_pred cccccceeeeeeecceeEEEeeeccccccCcceEEEeecccccccCCccccccccceeeeccceeeeeeccccCCceEee Confidence 000 000011111111000000000 0000001111111111 Q ss_pred -----ecccCccc--CCCCccEEEEEeceEEEEeCcCCCcEEEEEcccC------cccccccc-cCC--CCCcEEEEEcC Q lcl|Aclame:pro 307 -----WAKYAWNS--VNGYPGTVVYYQQRLYFAASTAFPQTIWASRTGD------YKDFGKSN-PTQ--DDDRIIYTYAG 370 (823) Q Consensus 307 -----~~~~~w~~--~~g~Ps~v~f~q~RL~f~~~~~~p~~V~~Sr~gd------y~nF~~~t-~~~--DdD~I~~~~~~ 370 (823) +..+.|.+ ++.+|+-.+.||.||++.+..+.|..+.+|.+|| ++||+.-+ -++ |+||+++.+++ T Consensus 471 ~Y~r~YGiG~~~~Y~~~~F~~I~TiY~~RLiL~~~s~~~~~~~~S~~GD~~~~G~~Y~F~QiTD~L~G~~tDPF~L~VtS 550 (1012) T protein:vir:94 471 CYVRAYGIGKYVDYSKRSFHAIGTIYRDRLILVNPSTATDQLLISEIGDATVPGEFYQFMQITDMLQGVTTDPFTLNVTS 550 (1012) T ss_pred eEEEEEEeeeeeecCCccccceeeeeeeeeEEeccCCCcceEEEeecCCcccCceeeeeeeeehhhccCcCCceeEEEcc Confidence 23334543 5678999999999999999999999999999887 78888655 233 89999999999 Q ss_pred CCceEEEEEeec-CcEEEEecCcEEEEecCCCccccccceEEEEeecccC-cccccEEeCCeEEEEecCCCEEEEEEeec Q lcl|Aclame:pro 371 RQVNEIRHLIDV-GSLVALTSGGEYVITGDQNKVLTPSSFAFSSQGSNGS-SNVPPIAVANIALFVQEKGSVVRDLAYSF 448 (823) Q Consensus 371 ~~~~~i~~~v~~-~~Ll~~t~~~q~~l~~~~~~~lTP~~~~i~~~s~~g~-~~~~Pv~vg~~v~f~~~~g~~v~e~~~~~ 448 (823) .-...|..++.- +.|++||..+-|.+.|+ +.++|....++.+|++|. +.-.-|+..-.|+|..+.| +.++...- T Consensus 551 e~~e~iT~~~~WQ~~LFV~T~~~T~~~~GG--e~~~~s~~~VN~vSt~G~~N~~~VV~T~~~V~Ym~~~G--~F~L~~k~ 626 (1012) T protein:vir:94 551 EGRERITAVTGWQKRLFVFTGSNTYSIEGG--EQFGESSYAVNLVSTYGAFNQNCVVVTNLTVLYMNKFG--LFDLMNKP 626 (1012) T ss_pred cccceeeeeeeeceeEEEEeccceEeeccc--cccchhHHHHHhHHhhcccCcceEEEeeeEEEEeeccc--eeeccCCc Confidence 767778888875 58999999999999975 469999999999999997 4445577788999999988 99999999 Q ss_pred cccceeecchHHHHHHhcCCCceEEEEEcCCCcEEEEEEeC--CCeEEEEEE-ecc-----------ccceeEEeeccCC Q lcl|Aclame:pro 449 DVDGYQGNDLTILANHLFQKHSIVDWCFSIVPYSSAFCIRD--DGKLLVMTY-LRD-----------QQVFAWAPQSSTG 514 (823) Q Consensus 449 ~~d~~~~~dlt~~~~hl~~~~~~~~~a~~~~p~~~~~~~~~--dg~l~~~ty-~~~-----------q~v~aW~~w~~~g 514 (823) +.|+|.+.+-|+-+..+|++- + .++-++..|+.-+ ..+||+-.= -.| ---.+|+..+..| T Consensus 627 ~~~~Y~A~ErSvKIR~~F~~~-----~-~ss~~~~~Wl~~~e~~~~LYi~L~~~~dT~~~S~~~~~N~~~DSWs~~~s~~ 700 (1012) T protein:vir:94 627 NTDSYGAFERSVKIRGLFQNL-----A-GSSGDNLHWLRYNESSNKLYIGLAAEGDTRTTSRNLMLNFTWDSWSTLSSAA 700 (1012) T ss_pred cCCcchhhhhhhhhhhhhhhh-----c-cccccceeeeeeccCCceEEEEecCCCcchhhhhhhhhhhhhcchhhhhccC Confidence 999999999999999998651 1 1122333343322 223333211 011 0113777777777 Q ss_pred ceEEEEEEecCCCCEEEEEEEecCCCcEEEEEEeecccc--CCcccc--eeEeeeeeEEeccccceeeeEeeccccCcCc Q lcl|Aclame:pro 515 KYESTCSISEGNEDAVYFVVNRTVNGQTVRYIERLSSRL--FTSDED--AFFVDSGLSYDGRNTSDRTMTITGGSGEWDY 590 (823) Q Consensus 515 ~~~~~~~~~~~~~d~l~~~v~r~~~g~~~~~~e~~~~~~--~~~~~~--~~~lD~~~~y~~~~~~~~~~~~~~~~~~l~~ 590 (823) .|+---.+..+..|...+.|. .|.++++|..-.+++ |..+.. -.|--|+-++++..-++.. +...|+. T Consensus 701 ~Fq~YP~V~~~~~~t~L~~i~---~~~TV~ML~~~~~~YiDFatirthiypF~~CaG~~~~~Vms~~~-----GIY~~~~ 772 (1012) T protein:vir:94 701 PFQMYPAVQLFKYMTWLTNIN---APLTVAMLATEMPFYIDFATIRTHIYPFTFCAGQRDVSVMSDSR-----GIYNLPL 772 (1012) T ss_pred Ccccchhhhhhhhhhhhhhhc---CchhhhhhhhccceeeeeehhcccccceeeeccceeeEEEecCC-----ceEEecc Confidence 765432222223332222222 233444433211111 100000 0123343333333222211 1122221 Q ss_pred cC-----cceEEe---cCCeEEcc-cccccEEEecccCceeEeeeEEEEEEEEeeEEecCCCceeeEecceeeeeeeeee Q lcl|Aclame:pro 591 LA-----EYTISV---SGGAYFTS-SDVGAQLQFPYTGADPDTGYEVSKELRCDIISVTSNTAVVVRANRNVPPSLRNVA 661 (823) Q Consensus 591 ~~-----~~~v~~---~dg~~~~~-~~vgg~i~l~~~~~~~~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 661 (823) +. ..+|+. ++...+.. ....|.=+ ...|-+-....+. +++..+ ++...-.... T Consensus 773 P~tP~I~~~tit~ss~~~~k~Yq~~T~~~GT~t-------Lt~~~~~~~~~~~--l~LL~~---------~~~~~~~a~V 834 (1012) T protein:vir:94 773 PVTPGILDYTITASSKAGAKTYQRNTASAGTET-------LTLRNPMMDYADT--LELLGG---------NVNASQFAMV 834 (1012) T ss_pred cccceeeeeEeeccchhhhheecccccccccee-------eeecChhhhcCcE--EEEecC---------CCCccEEEEE Confidence 11 111110 00000000 00000000 0000000000000 011100 0111111111 Q ss_pred eecccccceeeecccccccceEEEEeCCceeCCEEEcCCE-EEecC---CCcEEEECcccceEEEEcceecCCCCccccc Q lcl|Aclame:pro 662 TTNWQMARRTFGGLSHLEGQTVNILSDANVEPQKVVSGGA-VTLES---PGAVVHIGLPITAEFETLDININGQETLLDK 737 (823) Q Consensus 662 ~~~~g~~~~~~~gl~~l~g~~v~v~~dg~~~~~~~v~~g~-itl~~---~~~~~~~gl~~~~~~~~l~~~~~~~~~~~~~ 737 (823) .++.-.+. ...++|+++.-.- =+-++.+|. ++... .+.++++|..|.|..+..-+.+. +++| T Consensus 835 ~~~~~~~~--------TT~~TV~~N~~~~--lQ~T~~~GS~L~~~~~LsqN~~~~~G~~Y~S~Y~SP~F~L~----SL~~ 900 (1012) T protein:vir:94 835 MSNGFEPY--------TTYPTVTYNGVAP--LQWTVTGGSGLNNRPILSQNNNCIMGMIYPSVYASPIFDLE----SLGR 900 (1012) T ss_pred eecccccc--------cccceEEecceee--eeEEEecCCccccccccccCceEEEeecchhhhcchhhhhh----hhhh Confidence 22222222 2346666643222 223344443 33322 36789999999999876655555 7899 Q ss_pred ceeEeeEEEEEEcc--ccEEEecCCC---------ceeEeeccCCCcCCCCCCcccceEEEEecCCcCCccEEEEEEcCC Q lcl|Aclame:pro 738 KQVIPSVTLVVNAS--RGIWATTPGG---------KWYEYPQREFEFYDDPVDDATGKVEVKLDSNWGKNGRVKIRQLDP 806 (823) Q Consensus 738 ~~~i~~~~~~~~~s--~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~tg~~~~~~~~~~~~~~~~~i~q~~P 806 (823) .||+.++.|.+..+ ..++.....+ .|..+. ..|.+- ..-..+...+...+ +-+-.++-.-| T Consensus 901 LKr~K~~~L~~Dttvtsqlkynltsgfsqvsvlntawvavv----snynen--ivpavvsyqvgnsy--eirrvvelsip 972 (1012) T protein:vir:94 901 LKRLKKLHLQMDTTVTSQLKYNLTSGFSQVSVLNTAWVAVV----SNYNEN--IVPAVVSYQVGNSY--EIRRVVELSIP 972 (1012) T ss_pred hhheeeeeEEeeeeeeeeeeeehhcccceeeeecceeeeee----eccCcc--ccceeeeeecCCce--eeeEEEEEeec Confidence 99999999999876 3344432211 111111 111111 11122333332222 22222222222 Q ss_pred CC-------EEEEEEEEEE---EecCC Q lcl|Aclame:pro 807 LP-------LSVLAVIPRL---TVGGF 823 (823) Q Consensus 807 ~P-------~tvla~~~~~---~~~g~ 823 (823) |. |-|-++-.|. ..=-| T Consensus 973 lqgygcdyqfyiasvgaeafklaayef 999 (1012) T protein:vir:94 973 LQGYGCDYQFYIASVGAEAFKLAAYEF 999 (1012) T ss_pred ccccccceeEeeeeccccceeeeeeee Confidence 21 1122211110 00011 No 28 >protein:vir:2625 Length: 715 # NCBI annotation: gp27 # Family: family:all:5234 # MgeID: mge:55 # MgeName: SIO1 # Cross-refs: genbank:acc:NP_064766;genbank:gi:9964636;genbank:GeneID:1263056 Probab=99.69 E-value=3.1e-14 Score=94.62 Aligned_cols=613 Identities=16% Similarity=0.184 Sum_probs=270.5 Q ss_pred Cceeeee---cccccccccccccccchHHHHH-HHHhhhhcceeeecCCceecCccee-----eeeecCCCCCceEEEEE Q lcl|Aclame:pro 1 MAISWIQ---PSFAGGEIGPSLYGRIDMAKYQ-VALRKCDNFIVRQYGGVENRPGTRF-----VGAAKYPNRKCRLIPFQ 71 (823) Q Consensus 1 M~~~~~q---~sF~~GElsP~l~~r~Dl~ry~-~q~~~~~N~~~~~~GGl~rRPGt~f-----va~~~~~~~~~rLipF~ 71 (823) ||.+..| +.|.+| |..--.+.-|+ +..-.-+||.....|--+||-|+.+ +....-+++. -+-..+ T Consensus 1 m~~~~~~~~vNtFv~G-----liTEas~ltfpqnasiDe~N~~l~rdG~r~RR~g~~~E~~~vls~~~vp~ga-lv~~~~ 74 (715) T protein:vir:26 1 MPQSLTQRTVNTFIKG-----LITEASELTFPENASVDELNCSLGRDGTRRRRKAVTLEDNHVLSDVVVPEGA-LVQTLD 74 (715) T ss_pred CCcccchhHHhhhhhh-----eeeccccccCCccceeeeeeeeecCCCcchhhccceeecceEEEEEeecCce-eeeeec Confidence 9998887 578888 33333333333 3444568999999999999999765 4444333332 122222 Q ss_pred -EC---CCCeEEEEEeCC-eEEEEECCceEeeccccceEEec--ccccc---ccc-eeEEEEeCcEEEEEeCCceEEEEE Q lcl|Aclame:pro 72 -FS---TVQTYALEFGHQ-YMRVIKDGALVLNSSNVIYEIAT--PYTEA---DLF-RIKFTQSADVLTLVHPAYPPKELR 140 (823) Q Consensus 72 -~~---~~~~Y~l~fg~~-~irV~~~~g~v~~t~~~~~~~~t--Pyt~~---~l~-~L~~~qsaD~~fIvn~~~~p~~l~ 140 (823) ++ .-+.-||+|.-+ .+.+|-..+--+..++....++- -+... +.+ .+.++....++.|+||..-+.-|. T Consensus 75 W~na~G~v~~~~livqvg~~l~f~q~t~~pLs~~n~~~svdl~~~~~~vn~SPsh~~v~v~~~~G~livanp~i~~~~~~ 154 (715) T protein:vir:26 75 WYNVAGQVNLEFLVVQVNNILYFYEKSTDPLSANKYSGSVDLNTHSASNNLSPSEERVQVTSLNGYLIVASPAINTFYLG 154 (715) T ss_pred hhhcccccCcEEEEEEeccEEEEEeccCCccccCceeEEeeecceecccccccceeEEEEEEeeeEEEEecCCccEEEEE Confidence 12 223567777654 46777655421222222112221 11111 122 677888888999999998887665 Q ss_pred EcCCCCceeee--EEEeccccccccccceEEEEecccCCceeeeccccccccccccceEEEcccccceecceeeeeeeee Q lcl|Aclame:pro 141 RYAHDNWQLVD--VVTKNGPFEDINIDESLTVYASASTGTITLTASASIFGAEQVGKLFYLEQPAVDSVPVWETSKSTSI 218 (823) Q Consensus 141 r~~~~~ws~~~--~~f~~~p~~~i~~~~s~t~t~~a~t~~~Tvtas~~~~~a~~vg~~~~~~~~~~~~~~~~~~~~~~~~ 218 (823) -.. ..-+++. +.+..--+.-.+.+..+.. ....-+ +......+++.-..|.. .-...........+.+ T Consensus 155 ~d~-~t~s~t~~~ll~r~r~f~~qg~d~~~g~-~y~~~g--t~~tn~~iynlyN~gw~------~p~gt~~~N~~~~yiV 224 (715) T protein:vir:26 155 FNT-STEAFTATSISFKERDFEWQGSDVDVTS-LYFGEG--TSVSNQRIYDTYNVGWV------GPKGSAALNTYGSYIV 224 (715) T ss_pred ecC-CcceeEeeEEEEEeeeheeecccccccc-ccccCC--cccCchhheecccceee------cceeEEEEcCCCCceE Confidence 322 1112211 1111100000000000000 000000 00001111111111100 0000000000000100 Q ss_pred eeeEEeccceeeeEecccceeecccccCceEEEEeceeccccceEEEEEEecCccEEEEEEecCccccccEEEEeecccc Q lcl|Aclame:pro 219 GDIRRADSNYYRAVTAGKTGTLRPSHTEGTSWDGWGGSGDDDTGIEWEYLHSGFGIARITAVNGTTATAEVISYIPSQVV 298 (823) Q Consensus 219 ~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~~~~~~~~~~~~~~~~~~ 298 (823) .......++... ..+. ....|.....+.|.- ...-+..+ ++...- T Consensus 225 --ypa~s~~~~S~k-----------d~n~-------------afsk~ad~ei~tGt~-------~~~~G~yi--~D~~~~ 269 (715) T protein:vir:26 225 --YPALTHPWYSGK-----------DANG-------------AFNKADWLEIYTGSS-------LASNGHYV--LDVFNK 269 (715) T ss_pred --ecccccccCCCc-----------cccc-------------ccChhhccccccccc-------cccCceEE--Eeeeec Confidence 000111110000 0000 000010001111100 00000000 000000 Q ss_pred ccccCcceecccCcccCCCCccEEEEEeceEEEEe---CcCCCcEEEEEcc----cCccc----cccccc----CCCCCc Q lcl|Aclame:pro 299 GEDNASYKWAKYAWNSVNGYPGTVVYYQQRLYFAA---STAFPQTIWASRT----GDYKD----FGKSNP----TQDDDR 363 (823) Q Consensus 299 ~~~~~t~~~~~~~w~~~~g~Ps~v~f~q~RL~f~~---~~~~p~~V~~Sr~----gdy~n----F~~~t~----~~DdD~ 363 (823) + .+.-..+. ..+-|++|+.|.+|.+|+| .+|.| .|.+||. .|--| =++++. +-|+|. T Consensus 270 g---~~~leeev----~k~R~rsv~~yaGrV~yagiD~dkng~-rilfSqLv~s~~di~nCyQd~DPTsee~~dLidTDG 341 (715) T protein:vir:26 270 A---RTGLTTEV----ETGRFRSVAAYAGRVFYAGIDSAKNGG-KVYFSRLTERMSDVGNCYQVNDPTSEVLSDLLDTDG 341 (715) T ss_pred C---Cccchhhh----hcCCCcceeeecceEEEeecccccCCC-eEEEehhhcchhhcccccccCCCchhhhhhhhhcCC Confidence 0 00000000 1456788999999999994 45556 7999984 33333 333331 238999 Q ss_pred EEEEEcCCCceEEEEEeecC-cEEEEecCcEEEEecCCCccccccceEEEEeecccCccc-ccEEeCCeEEEEecCCCEE Q lcl|Aclame:pro 364 IIYTYAGRQVNEIRHLIDVG-SLVALTSGGEYVITGDQNKVLTPSSFAFSSQGSNGSSNV-PPIAVANIALFVQEKGSVV 441 (823) Q Consensus 364 I~~~~~~~~~~~i~~~v~~~-~Ll~~t~~~q~~l~~~~~~~lTP~~~~i~~~s~~g~~~~-~Pv~vg~~v~f~~~~g~~v 441 (823) ..+.+.+.. .|+.++.++ .||||+.+|.|+|.|. +..+|.++..+.++++.||++- .-|++|+.++|+.++| | T Consensus 342 g~iri~gah--~ii~Lv~f~~sLlvf~~NGVWAi~G~-d~g~tATdY~ltKIs~vg~sspnSvVvv~~~i~~WsdtG--I 416 (715) T protein:vir:26 342 GVVRIPDAH--NIRKLHVLGASLLVFAENGVWAVAGV-DNVFRATEYAITRISDVGLSNENSFVVADGIPIWWGKTG--I 416 (715) T ss_pred CEEEecCCC--CceeEEEecceEEEEEecceEEEecc-CCceeeeeeEEEEeeeeccCCCccEEEecceEEEeeCCc--E Confidence 999988763 477788875 7999999999999664 6789999999999999999764 4567899999999988 9 Q ss_pred EEEEeeccccceeecchH-HHHHHhcCCC-----ceEEEEEcCCCcEEEEEEeCCCeEEEEEEec----cccceeEEeec Q lcl|Aclame:pro 442 RDLAYSFDVDGYQGNDLT-ILANHLFQKH-----SIVDWCFSIVPYSSAFCIRDDGKLLVMTYLR----DQQVFAWAPQS 511 (823) Q Consensus 442 ~e~~~~~~~d~~~~~dlt-~~~~hl~~~~-----~~~~~a~~~~p~~~~~~~~~dg~l~~~ty~~----~q~v~aW~~w~ 511 (823) +.+.-+..-..+.+++|| ..+..|.+.. ..+.--|.+.+..+.|+.-+..++.-|+|++ +-...|+.+|. T Consensus 417 yal~~Nd~fn~~tAqNLTekTIq~~~~~I~~dk~knVtg~fd~~e~rVyW~yPn~dt~vdykyd~vLV~dLalgaFYp~~ 496 (715) T protein:vir:26 417 YAVQQSENLNTPTAQNLSLSTIQTLWNNISNAKKAQVTVEYDKINQRVFWFYPDNDESVDYKYNNILVMDLALQAFYPWR 496 (715) T ss_pred EEEEeccccCcchhhccchHHHHHHHhhcchhhhcceEEEEEccCCEEEEEEcCCceeeceeecCeEEEEeccccccccc Confidence 988877656779999999 6666666542 2345567788899999998877887777765 23335777776 Q ss_pred cCCce-------EEEE------------EE-----ecCCCCEEEEEEEec--CCCcEEEEEEeecccc---CCcccceeE Q lcl|Aclame:pro 512 STGKY-------ESTC------------SI-----SEGNEDAVYFVVNRT--VNGQTVRYIERLSSRL---FTSDEDAFF 562 (823) Q Consensus 512 ~~g~~-------~~~~------------~~-----~~~~~d~l~~~v~r~--~~g~~~~~~e~~~~~~---~~~~~~~~~ 562 (823) .+.+- .++. .+ --.++|.+..+..|. +.-.....+||+..+. |....+.-| T Consensus 497 v~~~a~~~~~~ig~~~~~~~~~~~t~~~vv~~~~v~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~ 576 (715) T protein:vir:26 497 VEDEASSTSYIIGTSYYGGLGSTSTETQVVNGADVVVNGSDNVVATLYRDYLEGDSEIKLLVRDGTTGKMTFATFRGDTY 576 (715) T ss_pred ccccccccceeeeeeeeCCcccccchhheeccceEEEeccceEEEEeecccccccceEEEEEEcCCceeEEEecccCcee Confidence 53221 1110 00 011234444444442 2333444577765442 333334445 Q ss_pred eeeee-----------EEeccccceeeeEeeccccCcCccCcceEEecCCeEEcccccccEEE--eccc--CceeEeeeE Q lcl|Aclame:pro 563 VDSGL-----------SYDGRNTSDRTMTITGGSGEWDYLAEYTISVSGGAYFTSSDVGAQLQ--FPYT--GADPDTGYE 627 (823) Q Consensus 563 lD~~~-----------~y~~~~~~~~~~~~~~~~~~l~~~~~~~v~~~dg~~~~~~~vgg~i~--l~~~--~~~~~vG~~ 627 (823) ||-+. .+-|+.++........+- ......|. |.-+.|..+ .....+-++ .+++ .+...--+. T Consensus 577 ~dw~s~d~~~~~~~gy~~~gd~~~~k~~pyvt~~-~~~tedg~-v~~~~g~~p-~n~sSclm~~sw~ws~s~st~~eaYk 653 (715) T protein:vir:26 577 LDWGSADYKSFAEAGYDFMGDITTFKNAPYVTTY-MRVTEDGY-VASGAGYEF-INPSSCLMSVSWNLSKSGSTPREIYK 653 (715) T ss_pred eeccccchhhHHHhhhhhcccceeeecCceEEEE-EEEecccc-eeccCCccc-cCCcceEEEEEeeeccCCCChhhhhe Confidence 66432 111222222221111000 00000111 111112111 111122222 1111 111111111 Q ss_pred EEEEEEEeeEEecC---CCceeeEe------cceeeeeeeeeeeecccccceeeecccccccceEEEEeCCceeCCE Q lcl|Aclame:pro 628 VSKELRCDIISVTS---NTAVVVRA------NRNVPPSLRNVATTNWQMARRTFGGLSHLEGQTVNILSDANVEPQK 695 (823) Q Consensus 628 ~~~~~~~~~~~~~~---~~~~~~~~------~~~v~~~~~~~~~~~~g~~~~~~~gl~~l~g~~v~v~~dg~~~~~~ 695 (823) |...-...+-.+.. .+...+.. .|.+..+|.. .++..+ ||-|=+| + |+--..+ T Consensus 654 ~~~~~~~~p~~~s~~~yp~~~VvTKsriRG~Gr~~~~rf~s-------~~gKdl----hl~Gysi--l--g~~~~~~ 715 (715) T protein:vir:26 654 LKDVPVVNPNDLSSINYPTDTVVTKSKVRGRGRSMKFRFES-------VAGKDF----HLVGYEV--I--GAKNNSY 715 (715) T ss_pred ecceeeeCCCccccccCCcceeEeeeeeeccceEEEEEEEe-------cCCcce----EEEeEEE--E--ecccCCC Confidence 11111111111111 00011100 0011111110 011111 1111111 0 0000000 No 29 >protein:vir:7329 Length: 825 # NCBI annotation: hypothetical protein # Family: family:all:780 # MgeID: mge:143 # MgeName: epsilon15 # Cross-refs: genbank:acc:NP_848220;genbank:gi:30387391;genbank:GeneID:2641863 Probab=99.51 E-value=4e-12 Score=83.09 Aligned_cols=650 Identities=11% Similarity=0.061 Sum_probs=205.8 Q ss_pred Cc---------------------------eeeeec-ccccccccccccccchHHHHHHHHhhhhcceeeecCC-ceecCc Q lcl|Aclame:pro 1 MA---------------------------ISWIQP-SFAGGEIGPSLYGRIDMAKYQVALRKCDNFIVRQYGG-VENRPG 51 (823) Q Consensus 1 M~---------------------------~~~~q~-sF~~GElsP~l~~r~Dl~ry~~q~~~~~N~~~~~~GG-l~rRPG 51 (823) |. -..+.+ .|+.|+- ..|+. .-.++..-..|| +..-.+ T Consensus 35 ~~N~~~~p~Gg~~rRpGt~fva~~~~~~~~~rLipF~fs~~q~-------y~Lef------g~~~lrv~~~gg~v~~~~~ 101 (825) T protein:vir:73 35 CDNFIVRQYGGVENRPGTRFVGPAKYPDRKCRLIPFQFSTVQT-------YALEF------GHNYMRVIKDGAYVLTTSN 101 (825) T ss_pred hcCcEEEecCCceecCchHHhHhhcCCCCCEEEEEEEeCCCcE-------EEEEE------eCCeEEEEeCCceEeccCC Confidence 10 001111 2333200 00000 000111111122 122222 Q ss_pred ceeeeeecCCCCCceEEEEEECCCCeEEEEEeCCeE---EEEECCc---eE---eecccc-----ceEEeccccccccce Q lcl|Aclame:pro 52 TRFVGAAKYPNRKCRLIPFQFSTVQTYALEFGHQYM---RVIKDGA---LV---LNSSNV-----IYEIATPYTEADLFR 117 (823) Q Consensus 52 t~fva~~~~~~~~~rLipF~~~~~~~Y~l~fg~~~i---rV~~~~g---~v---~~t~~~-----~~~~~tPyt~~~l~~ 117 (823) +.+--..-+.....+=+.|.=+.+.-|++ |..+ ++.+.+- .+ ....+. ..+..+.+....... T Consensus 102 ~~~e~~TPy~~~~l~~l~~~QsaD~~~i~---h~~~pp~~L~r~~~~~W~l~~~~f~~gp~~~in~~~sv~v~asg~tg~ 178 (825) T protein:vir:73 102 VIYELAMPYADTDLFRIKFTQSADVLTLV---HPAYPPKELRRYAHDNWQIVDVTTKNGPFEDINVDETVKVYASASTGT 178 (825) T ss_pred ceEEEecccchhhhhhheeeeecCEEEEE---cCCCceeEEEEecCCCcEEEEEeccCCccccccccccceeeecccCce Confidence 22211111111000111111111222221 1111 1111100 00 000000 001122233334445 Q ss_pred eEEEEeCcEEEEEeCCceEEEEEEcCCCCceeeeEEEecc----ccccccccceEEEEecccCCceeeecccccc----- Q lcl|Aclame:pro 118 IKFTQSADVLTLVHPAYPPKELRRYAHDNWQLVDVVTKNG----PFEDINIDESLTVYASASTGTITLTASASIF----- 188 (823) Q Consensus 118 L~~~qsaD~~fIvn~~~~p~~l~r~~~~~ws~~~~~f~~~----p~~~i~~~~s~t~t~~a~t~~~Tvtas~~~~----- 188 (823) +.+++++|.. +.++.++.+.+...+.|++........ .... ........+..+..+.+..+++.... T Consensus 179 ~TiTaS~a~~---~~~~vG~~i~~~~~~v~si~~~~~~~~~~~~~v~~-~~~~~~~~~~~~~~~t~~~~a~~g~~~~~~~ 254 (825) T protein:vir:73 179 ITLTASSAIF---GAEQVGKLFYLEQPAVDSVPVWETSKTTAINDVRR-ADSNYYRANTSGKTGTLRPSHTEGMSWDGWG 254 (825) T ss_pred eEEEeecccc---CchhcCeEEEEecccccccceeeeeeEEEeeeEEE-CCCceeeeecccccceeeccccCCceeEeee Confidence 5666666633 555556666555444444433221110 0000 00011111111111111111111100 Q ss_pred --ccccccceEEEcccccceecceeeeeeeeeeeeEEeccceeeeEecccceeecccc----------cCceEEEEecee Q lcl|Aclame:pro 189 --GAEQVGKLFYLEQPAVDSVPVWETSKSTSIGDIRRADSNYYRAVTAGKTGTLRPSH----------TEGTSWDGWGGS 256 (823) Q Consensus 189 --~a~~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~----------~~~~~~~~~~~~ 256 (823) .....+......... +... .+....+..+.... ......+.. .....|....+. T Consensus 255 g~~~~~~~~~~~~~~~~------~g~~------~it~~~~~~~~~~~--~~~~~~~~~~~~~~~~t~~~~~~~~~~~~gy 320 (825) T protein:vir:73 255 GTGSDDTGIQWEYLHSG------FGIA------KITAVAGDGLTATA--DVVSFIPSQVVGSANASYKWAKYAWNSVNGY 320 (825) T ss_pred eecccCCceEEEEEecC------CceE------EEeeccccceeecc--ccceecccccccCCCCCcccccCCcccCCCC Confidence 000111110000000 0000 00000000000000 000000000 000111111111 Q ss_pred ccccceEEEEEEecCccEEEEEEecCccccccEEEEeeccccccccCcceecccCcccCCCCccEEEEEeceEEEEeCcC Q lcl|Aclame:pro 257 GDDDTGIEWEYLHSGFGIARITAVNGTTATAEVISYIPSQVVGEDNASYKWAKYAWNSVNGYPGTVVYYQQRLYFAASTA 336 (823) Q Consensus 257 ~~~~~~~~~~~~~~~~g~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~w~~~~g~Ps~v~f~q~RL~f~~~~~ 336 (823) ...-.....+....+...-..+..-+.+ ++...+.+.....+++ ..+ ...=++.......+.=++ .|++..... T Consensus 321 Ps~v~f~q~RL~f~g~~~~p~~v~~Srt--gd~~nF~~~~~~~DdD-~I~--~~~s~~~~~~i~~~~~~~-~L~~~t~~~ 394 (825) T protein:vir:73 321 PSTVVYYQQRLYFAASTAYPQTIWASRT--GDYKDFGKNNPIQDDD-RII--YTYAGRQVNEIRHLIDVG-NLVALTSGG 394 (825) T ss_pred ccEEEEEcceEEEeecCCCCCEEEEEcc--CCccccccCCCCCCCc-cEE--EEEcCCcceeEEEEeecC-cEEEEecCc Confidence 1111111111111110000000001111 1111111111111111 111 111111111123333344 455544432 Q ss_pred CCcEEEEEc-ccCcccccccccCCCCCcEEEEEcCC-CceEEEEEeecCcEEEEecCc----EEEEecCCCccccccceE Q lcl|Aclame:pro 337 FPQTIWASR-TGDYKDFGKSNPTQDDDRIIYTYAGR-QVNEIRHLIDVGSLVALTSGG----EYVITGDQNKVLTPSSFA 410 (823) Q Consensus 337 ~p~~V~~Sr-~gdy~nF~~~t~~~DdD~I~~~~~~~-~~~~i~~~v~~~~Ll~~t~~~----q~~l~~~~~~~lTP~~~~ 410 (823) +. .+|. .++. +.+.+ |.+...+. ..+.++=+.-.+.++....++ |+..+..+ +......++ T Consensus 395 --e~-~l~~~~~~~--lTP~~-------~~~~~~s~~g~~~~~Pv~vg~~~~Fv~~~g~~vre~~~~~~~-d~~~~~dlt 461 (825) T protein:vir:73 395 --EY-TISGDQNKV--LTPSA-------FSFSSQGNNGSSNVPPIAVANIALFIQEKGSVVRDLAYSFDV-DGYQGTDLT 461 (825) T ss_pred --eE-EEecCCCcc--cceee-------EEEEeeeeeccccccceEeCCeEEEEeCCCCeEEEEEEeeec-Cceeccchh Confidence 11 2221 1111 22221 01111110 011111111122333333333 22222111 111111111 Q ss_pred --EEEeec-ccCcccccEEeCCeEEEEecCCCEEEEEEeeccccceeecchHHHHHHhcCCCceEEEEEcCCC--cEEEE Q lcl|Aclame:pro 411 --FSSQGS-NGSSNVPPIAVANIALFVQEKGSVVRDLAYSFDVDGYQGNDLTILANHLFQKHSIVDWCFSIVP--YSSAF 485 (823) Q Consensus 411 --i~~~s~-~g~~~~~Pv~vg~~v~f~~~~g~~v~e~~~~~~~d~~~~~dlt~~~~hl~~~~~~~~~a~~~~p--~~~~~ 485 (823) +..... ...-.......-++++|+-+....+.-+.|..+ +++.--+.|-+.|. +..+|.-... +.+.+ T Consensus 462 ~~a~hl~~~~~~~~~a~~~~p~~~~~~v~~dg~l~~~ty~~~------q~v~aW~~~~~~g~-v~~~~~i~~~~~D~l~~ 534 (825) T protein:vir:73 462 ILANHLFQKHSIVDWSFCIVPYSSAFCIRDDGKLLVLTYLRD------QQVFAWAPQSSAGK-YESTCSISEGSEDAVYF 534 (825) T ss_pred hhhHhhccCCceEEEEEcCCCceEEEEEecCCeEEEEEEecc------ccceeeEEEecCCc-EEEEEEecCCCccEEEE Confidence 000011 010011111222455554443345667777543 44455677777653 5555443332 23333 Q ss_pred EEeC--CCeEEE-EEEecc------cc---c---------eeEE----------eeccCCceEE---------------E Q lcl|Aclame:pro 486 CIRD--DGKLLV-MTYLRD------QQ---V---------FAWA----------PQSSTGKYES---------------T 519 (823) Q Consensus 486 ~~~~--dg~l~~-~ty~~~------q~---v---------~aW~----------~w~~~g~~~~---------------~ 519 (823) +++. +|.... +-++.. .+ + ..|+ .|.-+|.+.- - T Consensus 535 iV~R~~~g~~~~yiE~~~~~~~~~~~~~~~vD~g~~~~g~~~~~~l~~l~g~tv~~~~~g~~~~~v~~g~itl~~~~~~~ 614 (825) T protein:vir:73 535 VVNRTINGQTVRYIERLSSRLFTNDEDAFFVDCGLSYDGRNTSSRTMTISGGTGDWSYQVDYPVTVSGGAYFVNTDVGAQ 614 (825) T ss_pred EEEEeeCCceEEEEEEecccccCCCcceeEEEEEeeecccceeeceeeeCCceEEEEeCCeEEEEEcCCeEEecccceEE Confidence 3322 332221 111110 00 0 0111 1111221100 0 Q ss_pred EEEecCCC---------CEEEEEEEecCCCcEEEEEEeeccccCCcccceeEeeeeeEEeccccceeeeEeeccccCcCc Q lcl|Aclame:pro 520 CSISEGNE---------DAVYFVVNRTVNGQTVRYIERLSSRLFTSDEDAFFVDSGLSYDGRNTSDRTMTITGGSGEWDY 590 (823) Q Consensus 520 ~~~~~~~~---------d~l~~~v~r~~~g~~~~~~e~~~~~~~~~~~~~~~lD~~~~y~~~~~~~~~~~~~~~~~~l~~ 590 (823) +.++.... ..+.+.+.|..+ .++++.. ......++++||++++.+......+ +|.| T Consensus 615 i~l~~~~~~~~~~~~~~~~~~~~i~~~~~----~~~v~v~---~~~~~~a~~~~~~~t~~~~a~~~~~--------gL~h 679 (825) T protein:vir:73 615 IQFPYTGTDPDTNEPVAKELRGDIISVTS----NTAVVVR---FNRNVPPVLRNVATTNWQMARQTFS--------GLAH 679 (825) T ss_pred EEecccCcccccccceeceeeEEEccccC----ceEEEEE---ecccccceeeeecccCCCcchheec--------cccc Confidence 01111000 011111111111 1222221 1234567899999998776553222 6999 Q ss_pred cCcceEEe-cCCeEEccccc-ccEEEecccCceeEeeeEEEEEEEEeeEEecCCCceeeEecceeeeeeeeeeeeccccc Q lcl|Aclame:pro 591 LAEYTISV-SGGAYFTSSDV-GAQLQFPYTGADPDTGYEVSKELRCDIISVTSNTAVVVRANRNVPPSLRNVATTNWQMA 668 (823) Q Consensus 591 ~~~~~v~~-~dg~~~~~~~v-gg~i~l~~~~~~~~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~g~~ 668 (823) |||++|.+ +||++++..+| +|+|+|+.+++.+||||+|.++++++++++..++...++.+|... +-.+++.+..... T Consensus 680 LeG~~v~v~~Dg~~~~~~~V~~G~vtl~~~~~~v~vGl~y~~~~~~l~~~~~~~g~~~g~~~ri~~-~~~~~~~s~~~~~ 758 (825) T protein:vir:73 680 LEGQTVNILSDASVEPQKTVTGGAVTLESPGAVVHIGLPITAEFETLDININGQETLLDKKQVIPT-VTMVVNASRGIWA 758 (825) T ss_pred cCCceEEEEECCeeeCCeEecCcEEEecCCceEEEEeeCccceEEecccccCCCccccCccEEEEE-EEEEEEeeeeEEE Confidence 99999998 99999998877 899999999999999999999999999998766545555555433 3333444444444 Q ss_pred ceeeecccccccceEEEEeCCceeCCEEEcCCEEEecCCC-----cEE----EECcccceEEEEcceecCCC Q lcl|Aclame:pro 669 RRTFGGLSHLEGQTVNILSDANVEPQKVVSGGAVTLESPG-----AVV----HIGLPITAEFETLDININGQ 731 (823) Q Consensus 669 ~~~~~gl~~l~g~~v~v~~dg~~~~~~~v~~g~itl~~~~-----~~~----~~gl~~~~~~~~l~~~~~~~ 731 (823) +...+.|..+--|.-. .. |.+.+. -.|.+.++... ..+ .-.||++-.-..+.++++|= T Consensus 759 g~~~~~l~~~~~r~~~-~~-~~~~~~---~tG~~~~~~~~~~~~~~~~~i~q~~PlP~tvlav~~~~~~~g~ 825 (825) T protein:vir:73 759 TTPGGTWYEYPQREFE-FY-DDPVDD---ATGKVEVKLDSNWDKNGRVKVRQLDPLPLSVLAVLPRLTVGGF 825 (825) T ss_pred ecCCCcceEeeccCCC-cc-cCCCcc---ccCcEEEecCCCCCCccEEEEEEcCCCCEEEEEEEEEEEecCC Confidence 3333333333222111 11 221111 13444333211 111 12344444444444444433 No 30 >protein:vir:95475 Length: 771 # NCBI annotation: hypothetical protein ORF038 # Family: family:all:5234 # MgeID: mge:1570 # MgeName: PA11 # Cross-refs: genbank:acc:YP_001294631;genbank:gi:149408197;genbank:GeneID:5237042 Probab=99.46 E-value=9.9e-12 Score=80.90 Aligned_cols=693 Identities=16% Similarity=0.164 Sum_probs=283.4 Q ss_pred Cceeeee---cccccccccccccccchHHHHH-HHHhhhhcceeeecCCceecCccee-------eeeecCCCCCceE-E Q lcl|Aclame:pro 1 MAISWIQ---PSFAGGEIGPSLYGRIDMAKYQ-VALRKCDNFIVRQYGGVENRPGTRF-------VGAAKYPNRKCRL-I 68 (823) Q Consensus 1 M~~~~~q---~sF~~GElsP~l~~r~Dl~ry~-~q~~~~~N~~~~~~GGl~rRPGt~f-------va~~~~~~~~~rL-i 68 (823) |+.+..| +.|.+| |..--.+.-|+ +..-.-+||.....|--+||-|+.| +....-++ ..++ + T Consensus 1 m~~~~~~~~vNtFv~G-----liTEas~ltfpqnasiDe~N~~l~rdG~r~RR~g~~~E~~~~~vls~~~vpa-~g~~~v 74 (771) T protein:vir:95 1 MAKTTNAAEFNTFVGG-----LITEASPLTFPQNASIDEVNFILNRDGSRNRRNGMDFENGATKVVCNTLVPA-DGTIAV 74 (771) T ss_pred CCcccchhHHhhhhhh-----eeeccccccCCccceeeeeeeeecCCCcchhhceeeeecCCceEEEEEEecc-cceEEe Confidence 9988777 578888 33333333333 3444568999999999999999765 33332222 2222 2 Q ss_pred -EEE-EC---CCCeEEEEEeCC-eEEEEECCceEeeccccceEEeccccccccceeEEEEeCcEEEEEeCCceEEEEEEc Q lcl|Aclame:pro 69 -PFQ-FS---TVQTYALEFGHQ-YMRVIKDGALVLNSSNVIYEIATPYTEADLFRIKFTQSADVLTLVHPAYPPKELRRY 142 (823) Q Consensus 69 -pF~-~~---~~~~Y~l~fg~~-~irV~~~~g~v~~t~~~~~~~~tPyt~~~l~~L~~~qsaD~~fIvn~~~~p~~l~r~ 142 (823) ..+ ++ .-+..|+.|.-+ .+.+|-..+--+. .+..+..+.- .-.+.+.|+++.....+.|+||..-+.-+.-. T Consensus 75 ~~~~W~na~G~v~~~~livqvg~~l~f~q~t~~pLs-~~n~~~~a~~-nlSPsh~isv~v~~G~livanp~i~~~~~~~d 152 (771) T protein:vir:95 75 TSHNWENAGGEVGRWISLVQVGTELKFFQTTGETLS-EGNFYNYQFV-NMSPSHKLSYAVVDGLLVVANGSRDIYVFEYD 152 (771) T ss_pred eeechhhcccccCcEEEEEEeccEEEEEecCCCccc-ccceeeeecc-eeccceeEEEEEeeeEEEEecCCccEEEEEec Confidence 222 11 224567777654 4677765541111 1111111110 11223468888888899999999988766532 Q ss_pred CCCCceeee--EEEecc-ccccccccceEEEEecccCCceeeeccccccccccccceEEEcccccceecceeeeeeeeee Q lcl|Aclame:pro 143 AHDNWQLVD--VVTKNG-PFEDINIDESLTVYASASTGTITLTASASIFGAEQVGKLFYLEQPAVDSVPVWETSKSTSIG 219 (823) Q Consensus 143 ~~~~ws~~~--~~f~~~-p~~~i~~~~s~t~t~~a~t~~~Tvtas~~~~~a~~vg~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (823) . ..-+++. +.+..- ...++-.-.....+.. .-+.-+......+++.-..|.. .++.. ....+...+.+. T Consensus 153 ~-~t~s~t~~~ll~r~rf~~q~~~~G~d~~~~~~-~~~~gt~~tn~~iynlyN~gw~----~pk~~--~~snt~~~~iV~ 224 (771) T protein:vir:95 153 S-GSVSVTTKRLLVRDLFGVQDIVNGVDLRQGND-IATRPTVQTNAHIYNLRNQTFG----VPRVT--WHSNEPSDPIVT 224 (771) T ss_pred C-CcceeEeeeeeeeehhhccccccccceecccc-cccCCcccCchhheecccccee----ccccc--cccCCccccceE Confidence 2 2222222 111110 0000000000000000 0000000111112222111111 00000 000011111111 Q ss_pred eeEEeccceeeeEecccceeecccccCceEEEEec----eeccccceEEEEEEecCccEEEEEEecCccccccEEEEeec Q lcl|Aclame:pro 220 DIRRADSNYYRAVTAGKTGTLRPSHTEGTSWDGWG----GSGDDDTGIEWEYLHSGFGIARITAVNGTTATAEVISYIPS 295 (823) Q Consensus 220 ~~~~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~g~~~~t~~~~~~~~~~~~~~~~~ 295 (823) -.....+.++.. +...+ .+-....|...- -.+..+.-..........|...+.++.-........ T Consensus 225 ~y~a~~g~~pS~-----sd~~N-~a~~k~~~~Ei~t~~~f~~~~~~~~~~Gt~~~~~G~yi~da~~~g~~~Lt~~----- 293 (771) T protein:vir:95 225 FRSAASGKFPSN-----SDSVN-LALSKRADVEPSTTDRFRAEDIVLNPIGTYETARGFFIIDAMARGKSRLEEI----- 293 (771) T ss_pred eeeccCCCCcCC-----ceeec-cccchhhccceeeecccchhhhhhcccCcccccCcceeeehhhhccccccee----- Confidence 011111111100 00000 000000111000 000011100000111111222222221111110000 Q ss_pred cccccccCcceeccc-------CcccCCCCccEEEEEeceEEEEeC--------cCC---CcEEEEEcc----cCccc-- Q lcl|Aclame:pro 296 QVVGEDNASYKWAKY-------AWNSVNGYPGTVVYYQQRLYFAAS--------TAF---PQTIWASRT----GDYKD-- 351 (823) Q Consensus 296 ~~~~~~~~t~~~~~~-------~w~~~~g~Ps~v~f~q~RL~f~~~--------~~~---p~~V~~Sr~----gdy~n-- 351 (823) ...+-.+... +-..+-+--+.|+-|..|.|++++ +|. ..+|.+||. .|--| T Consensus 294 -----ve~~gr~~s~~~~~~~l~~~~t~~~~~~vaeyagRvwYag~~~~~iD~dkng~~~~~~ilfSqLv~s~~di~nCy 368 (771) T protein:vir:95 294 -----VKLKQRYPSLSFGVSSLPQDETPGGASVVCEYAGRVWYAGFSGQIIDGDDQSPRLVSYILFSQLVDSPADIVNCY 368 (771) T ss_pred -----eeccccchhhhccccccccccCCCCceeEEeeeeeEEEecceeEEeeccccCCceeeeEeeehhhcchhhccccc Confidence 0001111110 111233345779999999999982 333 346999984 33333 Q ss_pred --cccccc----CCCCCcEEEEEcCCCceEEEEEeecC-cEEEEecCcEEEEecCCCccccccceEEEEeecccCccc-c Q lcl|Aclame:pro 352 --FGKSNP----TQDDDRIIYTYAGRQVNEIRHLIDVG-SLVALTSGGEYVITGDQNKVLTPSSFAFSSQGSNGSSNV-P 423 (823) Q Consensus 352 --F~~~t~----~~DdD~I~~~~~~~~~~~i~~~v~~~-~Ll~~t~~~q~~l~~~~~~~lTP~~~~i~~~s~~g~~~~-~ 423 (823) =++++. +-|+|...+.+.+.. .|..++.++ .||||+.+|.|+|.|.++..+|.++..+.++++.||++- . T Consensus 369 Qd~DPTsee~~dLidTDGg~iri~gah--~ii~Lv~f~~sLlvfc~NGVWAi~ggsd~g~tAtdY~ltKIs~vg~sspnS 446 (771) T protein:vir:95 369 QDGDPTSTEEPELVDTDGGFIRIEGAH--DIINLVNVGSAVMVVAANGIWMIQGGSDYGFTATNYLVTKISEHGCSSPNS 446 (771) T ss_pred ccCCCchhhhhhhhhcCCCEEEecCCC--CceeEEEecceEEEEEecceEEEEeccCCceeeeeeEEEEeeeeccCCCcc Confidence 333331 238999999988763 477788875 799999999999998888899999999999999999764 4 Q ss_pred cEEeCCeEEEEecCCCEEEEEEeeccccceeecchH-HHHHHhcCCCceEEEEEcCCCcEEEEEEeCCCeEEEEEEeccc Q lcl|Aclame:pro 424 PIAVANIALFVQEKGSVVRDLAYSFDVDGYQGNDLT-ILANHLFQKHSIVDWCFSIVPYSSAFCIRDDGKLLVMTYLRDQ 502 (823) Q Consensus 424 Pv~vg~~v~f~~~~g~~v~e~~~~~~~d~~~~~dlt-~~~~hl~~~~~~~~~a~~~~p~~~~~~~~~dg~l~~~ty~~~q 502 (823) -|++|+.++|+.++| |+.+.-+. -..+.+++|| ..+..|.+..+ ++.-+-..-.|+..+ T Consensus 447 vVvvg~~i~ywsdtg--Iyal~~Nd-fn~~tAqnLTekTIq~~~~~I~-----------------~dk~knVtg~fd~~e 506 (771) T protein:vir:95 447 VVVVDNSFMYWGDDG--IYHLTRNQ-YGDYVANNLTEKTIQKYYEKIP-----------------SDAILNATGFYDSYD 506 (771) T ss_pred EEEecceEEEeeCCc--eEEEeecc-cCcchhhccchHHHHHHHhhcc-----------------hhhhcceEEEEEccC Confidence 567899999999988 88887775 4568999999 67777765421 011111223344433 Q ss_pred cceeEEee-ccCCceEEEEEEecCCCCEEEEEEEecCCCcEEEEEEeeccccCCcccceeEeeeeeEEeccccceeeeEe Q lcl|Aclame:pro 503 QVFAWAPQ-SSTGKYESTCSISEGNEDAVYFVVNRTVNGQTVRYIERLSSRLFTSDEDAFFVDSGLSYDGRNTSDRTMTI 581 (823) Q Consensus 503 ~v~aW~~w-~~~g~~~~~~~~~~~~~d~l~~~v~r~~~g~~~~~~e~~~~~~~~~~~~~~~lD~~~~y~~~~~~~~~~~~ 581 (823) +..=|.-- ..+++.+.+. | +|+.-.. .+||- +.+ +.........+ T Consensus 507 ~rvyw~yPn~~D~~~e~~t-------~---LV~dLal--------------------gaFYp-~~i---~~~~ag~l~~~ 552 (771) T protein:vir:95 507 KKVKWLYNTVLDGRTEPVT-------E---LVFDLAL--------------------GAFYP-SKI---GSLTAGRLPIP 552 (771) T ss_pred CEEEEEecceecCCCccee-------e---eeeeecc--------------------ccccc-ccc---cccccCcccee Confidence 33333311 1223222211 0 1111110 11110 000 00000000000 Q ss_pred eccccCcCccCcceEEecCCeEEcccccccEEEecc-----cCceeEeeeEEEEEEEEeeEEecCCCceeeEecceeeee Q lcl|Aclame:pro 582 TGGSGEWDYLAEYTISVSGGAYFTSSDVGAQLQFPY-----TGADPDTGYEVSKELRCDIISVTSNTAVVVRANRNVPPS 656 (823) Q Consensus 582 ~~~~~~l~~~~~~~v~~~dg~~~~~~~vgg~i~l~~-----~~~~~~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 656 (823) . +-.|..++-. ...+.+++++. +++.+.|...++..+. ... .-.+. T Consensus 553 v----g~~~~p~~~l----------v~T~~eV~v~~~~v~~tG~~vtV~~~~r~~~~-------~~~--------~y~~~ 603 (771) T protein:vir:95 553 V----GSVKIPPYKL----------VETGEEVTVASEQVTATGELVTVKVSTRSPVI-------RET--------KYIIV 603 (771) T ss_pred e----eeeecCcccc----------ccccceEEecceeeEecCCceEEEEEEeeccc-------cce--------EEEEE Confidence 0 0011111110 00122333221 1233333222222111 000 00111 Q ss_pred eeeeeeeccccc---ceeeecccccccceEEEEeCCceeCCEEEcCCEEEecCCCcEEEECcccceEEEEcceecCC-CC Q lcl|Aclame:pro 657 LRNVATTNWQMA---RRTFGGLSHLEGQTVNILSDANVEPQKVVSGGAVTLESPGAVVHIGLPITAEFETLDINING-QE 732 (823) Q Consensus 657 ~~~~~~~~~g~~---~~~~~gl~~l~g~~v~v~~dg~~~~~~~v~~g~itl~~~~~~~~~gl~~~~~~~~l~~~~~~-~~ 732 (823) +++.......++ ...|-.-....|-+|..- .-+.-.+. .+|.++- ..-+||.+-- +...-.| -. T Consensus 604 ~~dg~~g~~~Fa~~~~~~f~DW~sv~~~~vdy~--sy~~~gY~-~~gd~~~-------~k~~PYit~y--~~~tedg~v~ 671 (771) T protein:vir:95 604 EKLSSPMRISFGGYTDEEFVDWKSVDGIGVDAP--AYLLTGYL-AGGDYQR-------EKFVPYITFH--FKKTEDGFVE 671 (771) T ss_pred EecCCCeeEEeccccCcceeecccCCCcccchH--HHHHhhhh-ccchhee-------eeccceEEEE--EEeeccccee Confidence 111111111111 111100111111111100 00000000 0111111 1223333221 1110011 01 Q ss_pred cccccceeEeeEEEEEEccccEEEecCC----CceeEeeccC-CCc--CCCCCCcccceEE--EEecCCcCCccEEEEEE Q lcl|Aclame:pro 733 TLLDKKQVIPSVTLVVNASRGIWATTPG----GKWYEYPQRE-FEF--YDDPVDDATGKVE--VKLDSNWGKNGRVKIRQ 803 (823) Q Consensus 733 ~~~~~~~~i~~~~~~~~~s~~~~~~~~~----~~~~~~~~~~-~~~--~~~~~~~~tg~~~--~~~~~~~~~~~~~~i~q 803 (823) ++.|.-.-++.-.-.|..|-.....+.. .+++.+++|+ ..+ .++...+..-.++ .++. |-.|--+++|+. T Consensus 672 ~~~g~~~p~n~sSclm~~sw~ws~s~~t~k~~~~~eaYk~~~~~~p~~~~~~~yp~~~VV~TKsriR-G~Gr~~~~rf~s 750 (771) T protein:vir:95 672 DAEGDWTPTNQSSCMVQSQWSWTNSPASNKWGRTWQAYRFRRHFFPDNIDNQFDDGNSVVETKSRLR-GSGKVLSLYITT 750 (771) T ss_pred cccccccccCCcceEEEEEeeeecCCCCCccccchheeeecceeccCCcchhcCCccceeeeeheee-ecceEEEEEEEe Confidence 1222211222212222223333332221 2356666664 111 2222222221221 2222 456777899999 Q ss_pred cCCCCEEEEEEEEEEEecCC Q lcl|Aclame:pro 804 LDPLPLSVLAVIPRLTVGGF 823 (823) Q Consensus 804 ~~P~P~tvla~~~~~~~~g~ 823 (823) ..---|+|++-.+-+++||- T Consensus 751 ~~gKdlhl~Gysil~~~~~~ 770 (771) T protein:vir:95 751 EPKKNLHIYGWSMLVDVNGT 770 (771) T ss_pred cCCcceEEEeEEEEEeecCc Confidence 99999999999999999999 No 31 >protein:vir:3366 Length: 801 # NCBI annotation: tail tubular protein B # Family: family:all:825 # MgeID: mge:67 # MgeName: T3 # Cross-refs: genbank:acc:NP_523337;swissprot:trembl:q8w5u3;genbank:gi:17570828;goa:Q8W5U3;uniprot:Q8W5U3;genbank:GeneID:927453 Probab=99.38 E-value=7.7e-12 Score=81.50 Aligned_cols=652 Identities=9% Similarity=0.025 Sum_probs=212.4 Q ss_pred Cceee---eeccccccccccccc--------------ccchHHHHH-HHHhhhhcceeeecCCceecCcceeeeee---- Q lcl|Aclame:pro 1 MAISW---IQPSFAGGEIGPSLY--------------GRIDMAKYQ-VALRKCDNFIVRQYGGVENRPGTRFVGAA---- 58 (823) Q Consensus 1 M~~~~---~q~sF~~GElsP~l~--------------~r~Dl~ry~-~q~~~~~N~~~~~~GGl~rRPGt~fva~~---- 58 (823) +.... ++.+ ....+.|.++ ++.++..|. ++.+...|.-.......-.|.-.+++-.. T Consensus 46 pGt~~va~~~~~-~~~~~~~~~~~~~r~~~~~y~l~~~~~~irv~~~~G~~~~v~~~~~y~~~~~~~~~l~~~t~aD~~f 124 (801) T protein:vir:33 46 PPMIHLKTLGTA-GYVGAQPYVHLINRDEFEQYFVVFTGEDIKVFDLDGKEYQVRGDRSYVRTANPREDLRMVTVADYTF 124 (801) T ss_pred chhHhhhhhcCC-CccccceEEEEEEeCCceEEEEEEcCCeEEEEccCCcEEEEecCCcceeecCcchheEEEEEcCEEE Confidence 11100 0100 0011222221 111221111 11111111111000001111112221110 Q ss_pred -cCCCC-------CceEEEEEECCCC-eEEEEEeCCeEEEEECCceEeeccccce--EEeccccccccceeEEEEeCcEE Q lcl|Aclame:pro 59 -KYPNR-------KCRLIPFQFSTVQ-TYALEFGHQYMRVIKDGALVLNSSNVIY--EIATPYTEADLFRIKFTQSADVL 127 (823) Q Consensus 59 -~~~~~-------~~rLipF~~~~~~-~Y~l~fg~~~irV~~~~g~v~~t~~~~~--~~~tPyt~~~l~~L~~~qsaD~~ 127 (823) .+.+. ..+..+ ++... .++-+.+..+-+-|+ +..++.... ++...+....+.++.+.++++.+ T Consensus 125 i~nr~~~p~~~~~~~~~~~--~~~~~~~li~v~~~~yg~t~~----I~i~gs~~~~~~~~~gs~~~~v~~~s~~~~A~~l 198 (801) T protein:vir:33 125 VTNRKVVVQSNDQSVNLPG--FKDQGDALINVRGGQYGRRLS----IEFNGAERAAVQLPDGSQPAHVNEVDGQAIAEKL 198 (801) T ss_pred EeeCCeeecccCCcccccc--cCCCcceEEEEeecccceEEE----EEECCcceEEEEeeccccccccccccchhhhhhh Confidence 00000 001111 11111 111111111111111 111222233 33334667778889999999999 Q ss_pred EEEeCCceEEEEEEcCCCCceeeeEEEeccccccccccceEE---EEecccCCceeeeccccc------c-ccccccceE Q lcl|Aclame:pro 128 TLVHPAYPPKELRRYAHDNWQLVDVVTKNGPFEDINIDESLT---VYASASTGTITLTASASI------F-GAEQVGKLF 197 (823) Q Consensus 128 fIvn~~~~p~~l~r~~~~~ws~~~~~f~~~p~~~i~~~~s~t---~t~~a~t~~~Tvtas~~~------~-~a~~vg~~~ 197 (823) +..|+.+.+.++.|.+++.|++...... ..+....+.+ .+..+..+...+.+.... . .....|..+ T Consensus 199 ~~~~~~~~~~~~~~~~~~~w~~~~~~g~----~~i~~p~~~~~~~itt~~g~~~~~~~~~~~~v~~~~~lp~~~~~g~~v 274 (801) T protein:vir:33 199 AAQLRNNLGNPNNDQDPNKWRFNVGPGF----IHILAPNNDNVWGLQTKDGYADQLINPVTHYTQSFQKLPINAPDGYIV 274 (801) T ss_pred hhhhhccCccceeeecCceEEEEecCeE----EEEecCCCcccccccccCCccceeEEEEeecccceeeeeeecCCCcEE Confidence 9999999999999999999987432211 1111111111 111111111111110000 0 000012222 Q ss_pred EEccccccee-----------cceeeeeeeeeeeeEEeccceeeeE--ecccceeecccccCceEEEEeceeccccc--- Q lcl|Aclame:pro 198 YLEQPAVDSV-----------PVWETSKSTSIGDIRRADSNYYRAV--TAGKTGTLRPSHTEGTSWDGWGGSGDDDT--- 261 (823) Q Consensus 198 ~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~t~~~~~~~~~~~~~~~~~~~~~~~~--- 261 (823) .+........ ..|........ ............. ....+.+.... .|..- .+.++. T Consensus 275 ~v~~~~~~~~~~y~v~~~~~~~~w~e~~~~g~-~~~~~~~tmp~~l~~~~~~tf~~~~~-----~w~~r--~~gd~~tnp 346 (801) T protein:vir:33 275 KIVGDTSKTADQYYVRFDLNRKVWVETIGWNT-RTHLHYHTMPWALVRASDGNFDFKYL-----EWGAR--TVGDDTTNP 346 (801) T ss_pred EEEecCCCcccceEEEEEcCCcEEEEeecccc-ceeeeecccceEEEEccCceEEeccc-----Ccccc--ccCCccccC Confidence 2211100000 00000000000 0000000000000 00000000000 01000 000000 Q ss_pred -------------eEEEEEEecCccEEEEEEecCccccccEEEEeecccc-ccccCcceecccCcccCCCCccEEEEEec Q lcl|Aclame:pro 262 -------------GIEWEYLHSGFGIARITAVNGTTATAEVISYIPSQVV-GEDNASYKWAKYAWNSVNGYPGTVVYYQQ 327 (823) Q Consensus 262 -------------~~~~~~~~~~~g~~~~t~~~~~~~~~~~~~~~~~~~~-~~~~~t~~~~~~~w~~~~g~Ps~v~f~q~ 327 (823) ....+....... +..-+.+. +...+.+.... ..++.-.+. ..=++...-.+.+-.++. T Consensus 347 ~psf~g~~~~~v~f~q~RL~f~~~~----~v~~Srtg--d~~nF~~~t~~~~~DdD~i~~--~~~~~~~~~i~~~v~~~~ 418 (801) T protein:vir:33 347 YPSFTGQTINDIFFFRNRLGFLSGE----NIILSRTS--KYFNFFPASVSNYSDDDPIDV--AVSHDRVSTLKYAVPFSE 418 (801) T ss_pred cccccCCCceEEEEEcceEEEeeCC----eEEEEecC--CccccccccccCCCCCccEEE--EecCCcceeeeEEeecCC Confidence 000000000000 00001100 00011111000 000000010 000111111122334443 Q ss_pred eEEEEeCcCCCcEEEEEcccCcccccccccCCCCCcEEEEEcCCCceEEEEEeecCcEEEEecCcEE------EEecCCC Q lcl|Aclame:pro 328 RLYFAASTAFPQTIWASRTGDYKDFGKSNPTQDDDRIIYTYAGRQVNEIRHLIDVGSLVALTSGGEY------VITGDQN 401 (823) Q Consensus 328 RL~f~~~~~~p~~V~~Sr~gdy~nF~~~t~~~DdD~I~~~~~~~~~~~i~~~v~~~~Ll~~t~~~q~------~l~~~~~ 401 (823) -|++..... | ..+|.. + =+.+++. .|.....-.-.+.++=+.-.+.++.....+.| ......+ T Consensus 419 ~L~l~t~~~--q-~~l~~~-~--~lTP~~~-----~~~~~s~~~~~~~~~Pv~vg~~v~f~~~~g~~~~v~r~~~~~~~~ 487 (801) T protein:vir:33 419 ELLLWSDQA--Q-FVLTAS-D--ILSSRSV-----GLNLTTQFDVQDRARPHGVGRNVYFSSPRASFTSINRYYAVQDVS 487 (801) T ss_pred cEEEEecCc--E-EEEeCC-C--cccceeE-----EEEEEEeecccCCCCceEecCeEEEEecCCCeeEEEEEEeecccc Confidence 344443322 2 222321 1 0222221 01111110111122222333455555555543 1111111 Q ss_pred ccccccceEEEEeecc--cCcccccEEeCC-eEEEEecCCCEEEEEEeeccccceeecchHHHHHHhcCCCceEEEEEcC Q lcl|Aclame:pro 402 KVLTPSSFAFSSQGSN--GSSNVPPIAVAN-IALFVQEKGSVVRDLAYSFDVDGYQGNDLTILANHLFQKHSIVDWCFSI 478 (823) Q Consensus 402 ~~lTP~~~~i~~~s~~--g~~~~~Pv~vg~-~v~f~~~~g~~v~e~~~~~~~d~~~~~dlt~~~~hl~~~~~~~~~a~~~ 478 (823) +......+++-..-.+ +.-...-...-+ .+++.......+.-+.|-... ..+++.--+.|-+.+. +..+|..- T Consensus 488 d~y~~~Dlt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~y~~~~---~e~~v~aW~~~~~~g~-~~~~~~~~ 563 (801) T protein:vir:33 488 SVKNAEDMTAHVPNYIPNGVFSISGTTAENFVAILTSGAPNRVYIYKFLYID---EEIRQQSWSHWDFGDN-VTVFAAQV 563 (801) T ss_pred cceehhhHHHHHHHhcCCceEEEEEcCCCCeEEEEEecCCCEEEEEEEecCC---CceEEEeeEEEEcCCC-EEEEEEec Confidence 2211111111000000 100000000011 233444444556555443221 2233334455656543 33333222 Q ss_pred CCcEEEEEEeCCCeEEEEEEeccccceeEEeeccCCceEEEEEEecCCCCEEEEEEEecCCCcEEEEEEeeccccCCccc Q lcl|Aclame:pro 479 VPYSSAFCIRDDGKLLVMTYLRDQQVFAWAPQSSTGKYESTCSISEGNEDAVYFVVNRTVNGQTVRYIERLSSRLFTSDE 558 (823) Q Consensus 479 ~p~~~~~~~~~dg~l~~~ty~~~q~v~aW~~w~~~g~~~~~~~~~~~~~d~l~~~v~r~~~g~~~~~~e~~~~~~~~~~~ 558 (823) ..+.+.++++..+.++.-.+.. .++..+.....+..+||. T Consensus 564 ~~d~l~~vv~r~~~~~le~~~~---------------------------------~~~~~d~~~~~~~~~lD~------- 603 (801) T protein:vir:33 564 INSTMTVLMSNEHAVWMGRLHF---------------------------------TKDSIDLPGEPYRLYIDA------- 603 (801) T ss_pred CCCEEEEEEEcCCcEEEEEEEE---------------------------------eeccccCCCccceEEeec------- Confidence 2223322333333332222210 111122222233444442 Q ss_pred ceeEeeeeeEEeccccceeeeEeeccccCcCccCcceEEe-cCCeEEccc----cccc----EEEecccCceeEeeeEEE Q lcl|Aclame:pro 559 DAFFVDSGLSYDGRNTSDRTMTITGGSGEWDYLAEYTISV-SGGAYFTSS----DVGA----QLQFPYTGADPDTGYEVS 629 (823) Q Consensus 559 ~~~~lD~~~~y~~~~~~~~~~~~~~~~~~l~~~~~~~v~~-~dg~~~~~~----~vgg----~i~l~~~~~~~~vG~~~~ 629 (823) .+.|.+++.+|++........ + .-..++.|++|+++.+ +||.++... +..+ .|.+++++++++||++|+ T Consensus 604 ~~~~~~~~~~~~~~~~~t~~~-~-~~~~gl~~~eg~~v~~~~dG~v~~~~~~~~~~~~~~~l~i~~~~~~~~v~vGl~y~ 681 (801) T protein:vir:33 604 KRKYTIPAGTYNDDTYQTSIS-L-STIYGMNFTKGRVSVVFPDGKIVEIDQPINGWSSDPMLRLDGNQEGQVVYIGFNIP 681 (801) T ss_pred ceEEEecccceecCccccccc-c-ccccCCccccceEEEEEeCCceEeeeeccccccCceeEEecCCCCCCEEEEeeeee Confidence 245678888887665432211 1 1234799999999987 899876432 2223 233357899999999999 Q ss_pred EEEEEeeEEecCCCcee-eEecceeeeeeeeeeeecccccceeeecccccccceEEEEeCCceeCCE-------EEcCCE Q lcl|Aclame:pro 630 KELRCDIISVTSNTAVV-VRANRNVPPSLRNVATTNWQMARRTFGGLSHLEGQTVNILSDANVEPQK-------VVSGGA 701 (823) Q Consensus 630 ~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~g~~~~~~~gl~~l~g~~v~v~~dg~~~~~~-------~v~~g~ 701 (823) ++++++++++..+.+.. .......+.+++++.........-.+ .+.. .+|.......+..++.. .+..|. T Consensus 682 s~~~~~~~~~~~~~~~~~~~~~~~~r~~l~r~~~~~~~tg~~~v-~v~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~tg~ 759 (801) T protein:vir:33 682 FTYTFSKFLIKKTAEDGSTATEDIGRLQLRRAWVNYEDSGAFII-RVNN-LSREFIYTMAGARLGSDNLRVGGSNIGTGQ 759 (801) T ss_pred EEEEeCceEEeccCCCCceeeeeeccEEEEEEEEEeecCcceEE-EECC-cccceeeeecccccccccccccccccccce Confidence 99999999987554321 11111111122222211111111111 0111 23444444444333322 122355 Q ss_pred EEecCC--CcEEEECcccceEEEEcceecCC---CCcccccceeE Q lcl|Aclame:pro 702 VTLESP--GAVVHIGLPITAEFETLDINING---QETLLDKKQVI 741 (823) Q Consensus 702 itl~~~--~~~~~~gl~~~~~~~~l~~~~~~---~~~~~~~~~~i 741 (823) +++|.. +.... |-+.++ .+||+.+-+ .|.-.-|.||| T Consensus 760 ~~vp~~g~~~~~~--v~i~~d-~P~P~tvl~i~~eg~y~~r~~~~ 801 (801) T protein:vir:33 760 YRFPVVGNAQTNT--VTIESD-ASTPLNIIGCGWEGNYLRRSSGI 801 (801) T ss_pred EEEEeeccCceEE--EEEEeC-CCCCEEEEEEEEEEEEeccccCC Confidence 555532 22222 233333 566665432 35566777777 No 32 >protein:vir:95324 Length: 823 # NCBI annotation: hypothetical protein # Family: family:all:780 # MgeID: mge:1564 # MgeName: phiV10 # Cross-refs: genbank:acc:YP_512269;genbank:gi:89152436;genbank:GeneID:3952993 Probab=99.25 E-value=3.3e-10 Score=72.54 Aligned_cols=660 Identities=10% Similarity=0.017 Sum_probs=192.7 Q ss_pred CceeeeecccccccccccccccchHHHHHHHHhhhhcceeeecCCceecCcceeeeeecCCCCCceEEEEEECCCCeEEE Q lcl|Aclame:pro 1 MAISWIQPSFAGGEIGPSLYGRIDMAKYQVALRKCDNFIVRQYGGVENRPGTRFVGAAKYPNRKCRLIPFQFSTVQTYAL 80 (823) Q Consensus 1 M~~~~~q~sF~~GElsP~l~~r~Dl~ry~~q~~~~~N~~~~~~GGl~rRPGt~fva~~~~~~~~~rLipF~~~~~~~Y~l 80 (823) +++-.. .|+.+|-==...+...+.-|..+. .+.+-.+..+.-..-+......=+.|.-.++--||+ T Consensus 65 ~rLipf--~~s~~q~y~Lefg~~~irV~~~~g------------~vv~~~~~~~ev~tPy~~~~l~~Lr~~qsaD~~fiv 130 (823) T protein:vir:95 65 CRLIPF--QFSTVQTYALEFGHQYMRVIKDGA------------LVLNSSNVIYEIATPYTEADLFRIKFTQSADVLTLV 130 (823) T ss_pred eeEEEE--EeCCCcEEEEEEcCCeEEEEeCCc------------EEEecCCceeEEecccccccccceeEEEeccEEEEE Confidence 221111 244443100001111111111111 011111111100000000000001111111111111 Q ss_pred EEeCCeE-EEEECCceEeeccccceEEecccccccc-ceeEEE---EeCcEEEEEeCC-ceE------EEEEEcC---CC Q lcl|Aclame:pro 81 EFGHQYM-RVIKDGALVLNSSNVIYEIATPYTEADL-FRIKFT---QSADVLTLVHPA-YPP------KELRRYA---HD 145 (823) Q Consensus 81 ~fg~~~i-rV~~~~g~v~~t~~~~~~~~tPyt~~~l-~~L~~~---qsaD~~fIvn~~-~~p------~~l~r~~---~~ 145 (823) .-. --+ ++-..+-.- ..-........||..-.. ..+... +.++++..++-+ ..+ -.+.+.. .. T Consensus 131 h~~-~~p~~L~r~~~~~-w~l~~~~~~~gp~~~~~~~~t~~v~~~~~~~~~t~ta~~~~~~~d~vg~~~~l~~~~~~~~~ 208 (823) T protein:vir:95 131 HPA-YPPKELRRYAHDN-WQLVDVVTKNGPFEDINIDESLTVYASASTGTITLTASASIFGAEQVGKLFYLEQPAVDSVP 208 (823) T ss_pred cCC-ccceEEEecCCCC-ceEEEEEEeccccccccccceeEEeccccCceeEEeecccccchhhccceEEEeccccceee Confidence 000 000 000000000 000000000011110000 000000 001111111000 000 0000000 01 Q ss_pred CceeeeEEEe------ccccc-cccccceEEEEecccCCceeeeccccccccccccceEEEcccccceecceeeeeeeee Q lcl|Aclame:pro 146 NWQLVDVVTK------NGPFE-DINIDESLTVYASASTGTITLTASASIFGAEQVGKLFYLEQPAVDSVPVWETSKSTSI 218 (823) Q Consensus 146 ~ws~~~~~f~------~~p~~-~i~~~~s~t~t~~a~t~~~Tvtas~~~~~a~~vg~~~~~~~~~~~~~~~~~~~~~~~~ 218 (823) .|........ ....+ ......+.+..+.+..+.+......+..........+.-...++ ..+........ T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~---~~~t~v~~~~~ 285 (823) T protein:vir:95 209 VWETSKSTSIGDIRRADSNYYRAVTAGKTGTLRPSHTEGTSWDGWGGSGDDDTGIEWEYLHSGFGI---ARITAVNGTTA 285 (823) T ss_pred ecceeeeecccceEEecccceeeeeccccceeecccCCcceEEeceecccccceeEEEEEeCCcce---EEEEeecceee Confidence 1111000000 00000 00000111222222222322222221111111111111000000 00000000000 Q ss_pred e--eeEEeccceeeeEecccceeecccccCceEEEEeceeccccceEEEEEEecCccEEEEEEecCccccccEEEEeecc Q lcl|Aclame:pro 219 G--DIRRADSNYYRAVTAGKTGTLRPSHTEGTSWDGWGGSGDDDTGIEWEYLHSGFGIARITAVNGTTATAEVISYIPSQ 296 (823) Q Consensus 219 ~--~~~~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~~~~~~~~~~~~~~~~ 296 (823) . .....+..... ....+.. .....|....+....-.....+....+.....++..-+.+.. ...+.+.. T Consensus 286 ~~~~~~~~~~~~~~--~~~~t~~-----~~~~~~~~~~g~Ps~v~f~q~RL~f~g~~~~p~~v~~Srtgd--~~nF~~~~ 356 (823) T protein:vir:95 286 TAEVISYIPSQVVG--EDNASYK-----WAKYAWNSVNGYPGTVVYYQQRLYFAASTAFPQTIWASRTGD--YKDFGKSN 356 (823) T ss_pred eceEeeeecccccc--CCcCCcc-----ccccccCcCCCCccEEEEEeceEEEEEcCCCCcEEEEeccCC--cccccccc Confidence 0 00000000000 0000000 000111111111111111111111111000000111111111 11111111 Q ss_pred ccccccCcceecccCcccCCCCccEEEEEeceEEEEeCcCCCcEEEEE-cccCcccccccccCCCCCcEEEEEcCC-Cce Q lcl|Aclame:pro 297 VVGEDNASYKWAKYAWNSVNGYPGTVVYYQQRLYFAASTAFPQTIWAS-RTGDYKDFGKSNPTQDDDRIIYTYAGR-QVN 374 (823) Q Consensus 297 ~~~~~~~t~~~~~~~w~~~~g~Ps~v~f~q~RL~f~~~~~~p~~V~~S-r~gdy~nF~~~t~~~DdD~I~~~~~~~-~~~ 374 (823) ...+++ ..+. ..=++.......+.=++ +|.+..... + ..+| ..++- +.+++. .+...+. -.+ T Consensus 357 ~~~DdD-~I~~--~~s~~~~~~i~~~v~~~-~Lli~t~~~--e-~~l~~~~~~~--lTP~~~-------~~~~~s~~g~~ 420 (823) T protein:vir:95 357 PTQDDD-RIIY--TYAGRQVNEIRHLIDVG-SLVALTSGG--E-YVITGDQNKV--LTPSSF-------AFSSQGSNGSS 420 (823) T ss_pred CCCCCC-cEEE--EEcCCcceEEEEEeecC-cEEEEecCc--E-EEEEcCCCcc--cceeeE-------EEEEeeccccc Confidence 111111 1111 00011111112222233 454444322 1 1111 11111 111110 1111110 011 Q ss_pred EEEEEeecCcEEEEecCc----EEEEecCCCccccccceEE--EEe-ecccCcccccEEeCCeEEEEecCCCEEEEEEee Q lcl|Aclame:pro 375 EIRHLIDVGSLVALTSGG----EYVITGDQNKVLTPSSFAF--SSQ-GSNGSSNVPPIAVANIALFVQEKGSVVRDLAYS 447 (823) Q Consensus 375 ~i~~~v~~~~Ll~~t~~~----q~~l~~~~~~~lTP~~~~i--~~~-s~~g~~~~~Pv~vg~~v~f~~~~g~~v~e~~~~ 447 (823) .++=+.-.+.++....++ |+..+..+ +.......++ ... ...+.....=...-++++|+-+....+.-|.|. T Consensus 421 ~~~Pv~vg~~~~Fv~~~g~~vre~~~~~~~-d~~~~~dlT~~a~hl~~~~~i~~~a~~~~p~~~~~~v~~dG~l~~~ty~ 499 (823) T protein:vir:95 421 NVPPIAVANIALFVQEKGSVVRDLAYSFDV-DGYQGNDLTILANHLFQKHSIVDWCFSIVPYSSAFCIRDDGKLLVMTYL 499 (823) T ss_pred cccceEeCCeEEEEecCCCEEEEEEEeeec-CceecchhhhhhhhhcCCCceEEEEEecCCCeEEEEEecCCcEEEEEEe Confidence 111111122233222222 22222111 1111111110 000 001111100011124555544333356667665 Q ss_pred ccccceeecchHHHHHHhcCCCceEEEEEcC-CCcEEEEE-EeC--CCeEEEE-EEecc-------ccc----------- Q lcl|Aclame:pro 448 FDVDGYQGNDLTILANHLFQKHSIVDWCFSI-VPYSSAFC-IRD--DGKLLVM-TYLRD-------QQV----------- 504 (823) Q Consensus 448 ~~~d~~~~~dlt~~~~hl~~~~~~~~~a~~~-~p~~~~~~-~~~--dg~l~~~-ty~~~-------q~v----------- 504 (823) .+ +++..-+.|-+.|. +..++.-. .....+|+ ++. +|....| -.+.+ +.. T Consensus 500 ~~------q~v~aW~~~~~~g~-~~~~~~i~~~~~d~l~~~v~R~i~g~~~~yiE~~~~~~~~~~~~~~~lD~~~s~~g~ 572 (823) T protein:vir:95 500 RD------QQVFAWAPQSSTGK-YESTCSISEGNEDAVYFVVNRTVNGQTVRYIERLSSRLFTSDEDAFFVDSGLSYDGR 572 (823) T ss_pred cc------cceeeeEEEecCCc-EEEEEEecCCCCCEEEEEEEeccCCeEEEEEEeeccccCCCccceeEEEEEEEeecC Confidence 43 44446777877764 44444432 22233333 332 3432211 11111 000 Q ss_pred -eeEEeecc----------CCceEE--------------EEEEecCCCC-----EEEEEEEecCCCcEEEEEEeeccccC Q lcl|Aclame:pro 505 -FAWAPQSS----------TGKYES--------------TCSISEGNED-----AVYFVVNRTVNGQTVRYIERLSSRLF 554 (823) Q Consensus 505 -~aW~~w~~----------~g~~~~--------------~~~~~~~~~d-----~l~~~v~r~~~g~~~~~~e~~~~~~~ 554 (823) .+....+. .|...+ .+.++....+ .+..++++.+......+.+++.. T Consensus 573 ~~~~~~~~l~~g~~~l~~l~g~~v~~adg~~~~~~~v~g~i~l~~~~~~~~vGl~~~~~i~~~~~~v~~~~a~~~~~--- 649 (823) T protein:vir:95 573 NTSDRTMTITGGSGEWDYLAEYTISVSGGAYFTSSDVGAQLQFPYTGADPDTGYEVSKELRCDIISVTSNTAVVVRA--- 649 (823) T ss_pred cccceeeEecCCCCcccccCceEEEecCcceECCccceeEEEeCcCCCccccccceEEEEEEeeceeeCCceEEEcc--- Confidence 00001000 111111 0111111111 13344444444333344444432 Q ss_pred CcccceeEeeeeeEEeccccceeeeEeeccccCcCccCcceEEe-cCCeEEccccc-ccEEEecccCceeEeeeEEEEEE Q lcl|Aclame:pro 555 TSDEDAFFVDSGLSYDGRNTSDRTMTITGGSGEWDYLAEYTISV-SGGAYFTSSDV-GAQLQFPYTGADPDTGYEVSKEL 632 (823) Q Consensus 555 ~~~~~~~~lD~~~~y~~~~~~~~~~~~~~~~~~l~~~~~~~v~~-~dg~~~~~~~v-gg~i~l~~~~~~~~vG~~~~~~~ 632 (823) .....+.|.||..++.+...... .+|+|+||++|.+ +||++++..+| +|.|+|+.+++.+++||+|++++ T Consensus 650 ~r~v~a~l~~~~t~~~~~~~~~~--------~gL~hleg~tv~v~~dg~~~~~~~v~~G~vtl~~~~~~v~vGl~~~~~~ 721 (823) T protein:vir:95 650 NRNVPPSLRNVATTNWQMARRTF--------GGLSHLEGQTVNILSDANVEPQKVVSGGAVTLESPGAVVHIGLPITAEF 721 (823) T ss_pred CCcccceeeeeecccccccccee--------eeccccccceEEEEEcCeeeCCeEecCCEEEecCCCCEEEEeecceeeE Confidence 22344567788877755433222 2699999999998 99999998877 89999999999999999999999 Q ss_pred EEeeEEecCCCceeeEecc--eeeeeeeeeeeecccccceeeecccccccceEEEEeCCceeCCEEEcCCEEEecCCC-- Q lcl|Aclame:pro 633 RCDIISVTSNTAVVVRANR--NVPPSLRNVATTNWQMARRTFGGLSHLEGQTVNILSDANVEPQKVVSGGAVTLESPG-- 708 (823) Q Consensus 633 ~~~~~~~~~~~~~~~~~~~--~v~~~~~~~~~~~~g~~~~~~~gl~~l~g~~v~v~~dg~~~~~~~v~~g~itl~~~~-- 708 (823) +++++++..++...++.+| .+..++.++.....|.....+..+...+.. .+ |.+.+.+ .|.+.++... T Consensus 722 ~~l~~~~~~~g~~~g~~~ri~~~~~~~~~s~~~~~g~~~~~l~~~~~r~~~----~~-~~~~~~~---tG~~~~~~~~~~ 793 (823) T protein:vir:95 722 ETLDININGQETLLDKKQVIPSVTLVVNASRGIWATTPGGKWYEYPQREFE----FY-DDPVDDA---TGKVEVKLDSNW 793 (823) T ss_pred EecchhcCCCcccCCceeEEeEEEEEEEeeeeEEEecCCCceeEeeccCCC----cc-cCCCCcc---cceEEEecCCCc Confidence 9999998876555555555 344455555555444433333333322222 11 2222222 3555554321 Q ss_pred ---cEE----EECcccceEEEEcceecCCC Q lcl|Aclame:pro 709 ---AVV----HIGLPITAEFETLDININGQ 731 (823) Q Consensus 709 ---~~~----~~gl~~~~~~~~l~~~~~~~ 731 (823) ..+ +-.||++-.-..+.++++|= T Consensus 794 ~~~~~~~i~q~~plp~tvl~v~~~~~~~g~ 823 (823) T protein:vir:95 794 GKNGRVKIRQLDPLPLSVLAVIPRLTVGGF 823 (823) T ss_pred CCccEEEEEEcCCCceEEEEEEEEEEecCC Confidence 111 23455555555555555433 No 33 >protein:vir:1543 Length: 801 # NCBI annotation: tail tubular protein B # Family: family:all:825 # MgeID: mge:31 # MgeName: phiYeO3-12 # Cross-refs: genbank:acc:NP_052111;swissprot:trembl:q9t105;genbank:gi:9634037;uniprot:Q9T105;genbank:GeneID:1262408 Probab=99.20 E-value=6e-10 Score=71.13 Aligned_cols=662 Identities=9% Similarity=0.028 Sum_probs=208.3 Q ss_pred Cceee---eecccccccccccc--------------cccchHHHHH-HHHhhhhcceeeecCCceecCcceeeeeec--- Q lcl|Aclame:pro 1 MAISW---IQPSFAGGEIGPSL--------------YGRIDMAKYQ-VALRKCDNFIVRQYGGVENRPGTRFVGAAK--- 59 (823) Q Consensus 1 M~~~~---~q~sF~~GElsP~l--------------~~r~Dl~ry~-~q~~~~~N~~~~~~GGl~rRPGt~fva~~~--- 59 (823) +.... ++. -......|.+ .++.++..|. ++.+...|.-.........|.-++++-... T Consensus 46 pGt~~va~~~~-~~~~~~~~~~~~~~~~~~e~y~l~~~~~~irv~~~~G~~~~v~~~~~y~~~~~~~~~l~~~~~aD~~f 124 (801) T protein:vir:15 46 PPMIHLKTLGP-AGYVGAQPYVHLINRDEFEQYFVVFTGEDIKVFDLDGKEYQVRGDRSYVRTANPREDLRMITVADYTF 124 (801) T ss_pred CchheeeeecC-CCCcccceeEEEEEeCCceEEEEEEcCCeEEEEccCCcEEEEecCCccccccCchhheeEEEEcCEEE Confidence 11111 110 0011122222 1222222221 111111111111111111122233321110 Q ss_pred --CCCC----CceEEE-EEECCC-CeEEEEEeCCeEEEEECCceEeeccccceEEec--cccccccceeEEEEeCcEEEE Q lcl|Aclame:pro 60 --YPNR----KCRLIP-FQFSTV-QTYALEFGHQYMRVIKDGALVLNSSNVIYEIAT--PYTEADLFRIKFTQSADVLTL 129 (823) Q Consensus 60 --~~~~----~~rLip-F~~~~~-~~Y~l~fg~~~irV~~~~g~v~~t~~~~~~~~t--Pyt~~~l~~L~~~qsaD~~fI 129 (823) +.+. ..+..+ ..++.. ..++-+.+..+-+-++ +...+....+..+ .+..+...++.+.+++|.++. T Consensus 125 i~nr~~~~~~~~~~~~~~~~~~~~~alv~v~~~~yg~t~~----I~i~gs~~~~~t~~~gs~~~~~~~~s~~~ia~~l~~ 200 (801) T protein:vir:15 125 VTNRKVVVQSNDQSVNLPGFKDQGDALINVRGGQYGRRLS----IEFNGAERAAVQLPDGSQPAHVNEVDGQAIAEKLAA 200 (801) T ss_pred EeeCCeeeecccCccccCccCCCCceEEEeeeccCceeEE----EEeCCcceEEEEeccCcccchhhhcceeechHHHhh Confidence 0000 000000 001111 1111111212211111 1111222223333 456677889999999999999 Q ss_pred EeCCceEEEEEEcCCCCceeeeEEEeccccccccccceEEEEecccCCceeeec---ccccc----ccccccceEEEccc Q lcl|Aclame:pro 130 VHPAYPPKELRRYAHDNWQLVDVVTKNGPFEDINIDESLTVYASASTGTITLTA---SASIF----GAEQVGKLFYLEQP 202 (823) Q Consensus 130 vn~~~~p~~l~r~~~~~ws~~~~~f~~~p~~~i~~~~s~t~t~~a~t~~~Tvta---s~~~~----~a~~vg~~~~~~~~ 202 (823) .|+.+.|.++.|.+++.|++............-+.+.....+..+. +...+.+ ....+ .....|..+.+... T Consensus 201 ~~~~~~p~~~~~~~~~~w~~~~~~g~~~i~a~~~~~~~~~~t~dg~-~~~~~~~~~~~v~~~~~lp~~~~~G~~v~v~~~ 279 (801) T protein:vir:15 201 QLRNNLGNPNNDQDPNKWRFNVGPGFIHILAPNNDNVWGLQTKDGY-ADQLINPVTHYTQSFQKLPINAPDGYIVKIVGD 279 (801) T ss_pred hhhhccCccceeccCccEEEEecCcEEEEeCCCCcccceeeecccc-CceeeeEEeecccceeeeeeecCCCcEEEEEec Confidence 9999999999999999998754322111000000000000111111 1100000 00000 00001111221111 Q ss_pred ccceecceeeeeeeeeeeeEEeccceeeeEec-ccceeeccc-------ccCceEEEE----ece-eccccceEEEEEEe Q lcl|Aclame:pro 203 AVDSVPVWETSKSTSIGDIRRADSNYYRAVTA-GKTGTLRPS-------HTEGTSWDG----WGG-SGDDDTGIEWEYLH 269 (823) Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~t~~~~~~-------~~~~~~~~~----~~~-~~~~~~~~~~~~~~ 269 (823) ..... ..+.+.. ..+.+.+..... +....+... ......|.. |.. ...++....+-.+ T Consensus 280 ~~~~~------~~y~v~~--~~~~~~w~E~a~~g~~~~~~~~tmp~~lv~~~~~~~~~~~~~w~~r~~gd~~tnp~psf- 350 (801) T protein:vir:15 280 TSKTA------DQYYVRF--DLNRKVWVETIGWNTRTHLYYHTMPWALVRASDGNFDFKVLEWGARTVGDDTTNPYPSF- 350 (801) T ss_pred CCCcc------ceEEEEE--EcCCeeEEeecccccceeeeccccceEEEeeccceEEEeccccccccCCccccCCcccc- Confidence 00000 0000000 000000000000 000000000 000000000 000 0000000000000 Q ss_pred cCccEEEEEEecCcc-----------ccccEEEEeecccc-ccccCcceecccCcccCCCCccEEEEEeceEEEEeCcCC Q lcl|Aclame:pro 270 SGFGIARITAVNGTT-----------ATAEVISYIPSQVV-GEDNASYKWAKYAWNSVNGYPGTVVYYQQRLYFAASTAF 337 (823) Q Consensus 270 ~~~g~~~~t~~~~~~-----------~~~~~~~~~~~~~~-~~~~~t~~~~~~~w~~~~g~Ps~v~f~q~RL~f~~~~~~ 337 (823) .+.++-..+-+..+. .+++...+.+.... ..++.-.+. ..=++...-...+..++.-|++..... T Consensus 351 ~g~~~~~v~f~q~RL~f~~~~~v~~Srtgd~~nF~~~t~~~~~DdD~i~~--~~~~~~~~~i~~~v~~~~~L~i~t~~~- 427 (801) T protein:vir:15 351 TGQTINDIFFFRNRLGFLSGENIILSRTSKYFNFFPASVSNYSDDDPIDV--AVSHNRVSTLKYAVPFSEELLLWSDQA- 427 (801) T ss_pred cCCCceEEEEEcceEEEeeCCeEEEEecCCccccccccccCCCCCccEEE--EecCCcceeeEEEeecCCcEEEEecCc- Confidence 000000000000000 00000001010000 000000000 000000001122333443344443322 Q ss_pred CcEEEEEcccCcccccccccCCCCCcEEEEEcCCCceEEEEEeecCcEEEEecCcEE------EEecCCCccccccceEE Q lcl|Aclame:pro 338 PQTIWASRTGDYKDFGKSNPTQDDDRIIYTYAGRQVNEIRHLIDVGSLVALTSGGEY------VITGDQNKVLTPSSFAF 411 (823) Q Consensus 338 p~~V~~Sr~gdy~nF~~~t~~~DdD~I~~~~~~~~~~~i~~~v~~~~Ll~~t~~~q~------~l~~~~~~~lTP~~~~i 411 (823) |.+ +|.. + =+.+++. .|.....-.-.+.++=+.-.+.++.....+.| +.....++......+++ T Consensus 428 -q~~-ls~~-~--~lTP~~~-----~~~~~s~~~~~~~~~Pv~vg~~v~f~~~~g~~~~~~r~~~~~~~~d~y~a~Dlt~ 497 (801) T protein:vir:15 428 -QFV-LTAS-G--ILSSRSV-----ELNLTTQFDVQDRARPHGVGRNVYFASPRASFTSINRYYAVQDVSSVKNAEDMTA 497 (801) T ss_pred -EEE-EcCC-C--cccceeE-----EEEEEEeeeccCCCCceEeCCeEEEEecCCCeeEEEEEEeecccccceehhhHHH Confidence 222 2321 1 0222211 01111110111112222233455555555543 11111122222221111 Q ss_pred EEeeccc--CcccccEE-eCCeEEEEecCCCEEEEEEeeccccceeecchHHHHHHhcCCCceEEEEEcCCCcEEEEEEe Q lcl|Aclame:pro 412 SSQGSNG--SSNVPPIA-VANIALFVQEKGSVVRDLAYSFDVDGYQGNDLTILANHLFQKHSIVDWCFSIVPYSSAFCIR 488 (823) Q Consensus 412 ~~~s~~g--~~~~~Pv~-vg~~v~f~~~~g~~v~e~~~~~~~d~~~~~dlt~~~~hl~~~~~~~~~a~~~~p~~~~~~~~ 488 (823) ...-.+. .-...-.. -+..+++..+....+.-+.|-... .-+++.--+.|-+.+. +..+|.....+.+.++++ T Consensus 498 ~~~hl~~~~v~~~~~~~~~~~~~~~~~~~~~~l~~~~y~~~~---~e~~v~aW~~~~~~g~-~~~~~~~~~~d~l~~~v~ 573 (801) T protein:vir:15 498 HVPNYIPNGVFSISGTTAENFAAILTSGAPNRVYIYKFLYID---EEIRQQSWSHWDFGDN-VTVFAAQVINSTMTVLMG 573 (801) T ss_pred HHHHhcCCceEEEEEeCCCCcEEEEEEcCCCEEEEEEEecCC---CceEEEeeEEEEcCCC-EEEEEEEecCCEEEEEEE Confidence 1100111 00000000 112344445555566666554322 2233334556666553 333333222233222333 Q ss_pred CCCeEEEEEEeccccceeEEeeccCCceEEEEEEecCCCCEEEEEEEecCCCcEEEEEEeeccccCCcccceeEeeeeeE Q lcl|Aclame:pro 489 DDGKLLVMTYLRDQQVFAWAPQSSTGKYESTCSISEGNEDAVYFVVNRTVNGQTVRYIERLSSRLFTSDEDAFFVDSGLS 568 (823) Q Consensus 489 ~dg~l~~~ty~~~q~v~aW~~w~~~g~~~~~~~~~~~~~d~l~~~v~r~~~g~~~~~~e~~~~~~~~~~~~~~~lD~~~~ 568 (823) ..+.++...+...++ .-++.+ ..+.+ +|... ..|..++.+ T Consensus 574 r~~~~~~~r~~~~~~-----~~~~~~-----------~~~~~--------------~lD~~----------~~~~~~~~t 613 (801) T protein:vir:15 574 NEHAVWMGRLHFTKN-----SIDIPG-----------EPYRL--------------YIDAK----------RKYTIPAGT 613 (801) T ss_pred ecCcEEEEEEEEccc-----cccCCC-----------cceee--------------eeeee----------eeEeeccce Confidence 333222211110000 000000 01111 11111 134566677 Q ss_pred EeccccceeeeEeeccccCcCccCcceEEe-cCCeEEccccc-cc-------EEEecccCceeEeeeEEEEEEEEeeEEe Q lcl|Aclame:pro 569 YDGRNTSDRTMTITGGSGEWDYLAEYTISV-SGGAYFTSSDV-GA-------QLQFPYTGADPDTGYEVSKELRCDIISV 639 (823) Q Consensus 569 y~~~~~~~~~~~~~~~~~~l~~~~~~~v~~-~dg~~~~~~~v-gg-------~i~l~~~~~~~~vG~~~~~~~~~~~~~~ 639 (823) |.+....... ...-..++.|++|+++.+ +||.+....++ +| .|.++.++++++||++|+++++++++++ T Consensus 614 ~~~~~~~~~~--~~~~~~gl~~l~g~~v~v~~dG~~~~~~~~~~g~~~~~~~~i~~~~~~~~v~vGl~y~~~~~~~~~~~ 691 (801) T protein:vir:15 614 YNDDTYQTSI--SLATIYGMNFTKGRVSVVFPDGKIIEVDQPINGWSSDPVLRLDGNQEGQVVYIGFNIPFTYTFSKFLI 691 (801) T ss_pred eccCceeccc--ccccccccccccceEEEEEeCCceeeeeeecCcccCcceEEEcCCCCCcEEEEeeeeeEEEEecceEE Confidence 7654433211 112234789999999987 99988776655 44 3445688999999999999999999998 Q ss_pred cCCCcee-eEecceeeeeeeeeeeecccccceeeecccccccceEEEEeCCce-------eCCEEEcCCEEEecC--CCc Q lcl|Aclame:pro 640 TSNTAVV-VRANRNVPPSLRNVATTNWQMARRTFGGLSHLEGQTVNILSDANV-------EPQKVVSGGAVTLES--PGA 709 (823) Q Consensus 640 ~~~~~~~-~~~~~~v~~~~~~~~~~~~g~~~~~~~gl~~l~g~~v~v~~dg~~-------~~~~~v~~g~itl~~--~~~ 709 (823) ..+.+.. .......+.+++++...... .+..--.++. .++......-+.. .+...+..|.+++|. .+. T Consensus 692 ~~~~~~~~~~~~~~~rl~l~r~~~~~~~-tg~~~~~v~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~tg~~~vp~~g~~~ 769 (801) T protein:vir:15 692 KKTAEDGSTATEDIGRLQLRRAWVNYED-SGAFTIRVNN-LSREFIYTMAGARLGSDNLRVGRSNIGTGQYRFPVVGNAQ 769 (801) T ss_pred eccCCCCCceeeeeccEEEEEEEEEecc-CcceEEEECC-cccccceeecCcccccccccccccccccceEEEEEeecCc Confidence 7554321 11111111222222211111 0000000111 1222211111111 111222345666553 222 Q ss_pred EEEECcccceEEEEcceecCC---CCcccccceeE Q lcl|Aclame:pro 710 VVHIGLPITAEFETLDINING---QETLLDKKQVI 741 (823) Q Consensus 710 ~~~~gl~~~~~~~~l~~~~~~---~~~~~~~~~~i 741 (823) ... +-+.++ .+||+.+-+ .|.-.-|.||| T Consensus 770 ~~~--v~i~~d-~P~P~tvlsi~~e~~y~~r~~~~ 801 (801) T protein:vir:15 770 TNL--VTIESD-ASTPLNIIGCGWEGNYLRRSSGI 801 (801) T ss_pred eEE--EEEEEC-CCCcEEEEEEEEEEEEeccccCC Confidence 222 233333 566665432 35566777777 No 34 >protein:vir:3133 Length: 911 # NCBI annotation: hypothetical protein # Family: family:all:5234 # MgeID: mge:64 # MgeName: VpV262 # Cross-refs: genbank:acc:NP_640315;genbank:gi:21234408;genbank:GeneID:956056 Probab=98.80 E-value=4.2e-08 Score=61.01 Aligned_cols=763 Identities=15% Similarity=0.147 Sum_probs=275.9 Q ss_pred Ccee-eeecccc--cccccccccccchHHHHHHH-HhhhhcceeeecCCceecCcce-------eeeeecCCCCCceEEE Q lcl|Aclame:pro 1 MAIS-WIQPSFA--GGEIGPSLYGRIDMAKYQVA-LRKCDNFIVRQYGGVENRPGTR-------FVGAAKYPNRKCRLIP 69 (823) Q Consensus 1 M~~~-~~q~sF~--~GElsP~l~~r~Dl~ry~~q-~~~~~N~~~~~~GGl~rRPGt~-------fva~~~~~~~~~rLip 69 (823) |+.+ -.-+-|+ .|= -.--.|..|..- +-..+||-...+|=-+||=|+- |+........+--|.. T Consensus 1 ~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (911) T protein:vir:31 1 MAARKGAVNRFTPVRGW-----VTEGNLANYGQDVALDVENMDIEKTGLTQRRFGLFAETSSEQFLSTFTATARARGLLA 75 (911) T ss_pred Cccccccccccccceee-----eecCchhhcCceeEeeeccccchhcccchhheeeeeccchhhhhhhhhhhhhhcceee Confidence 6653 2233343 110 011134444332 3457899888888888887753 2222211111111111 Q ss_pred E-----EECCCCeEEEEEeCCe-EEEEECCceEeeccccceEEecccccccc-------ceeEEEEeCcEEEEEeCCceE Q lcl|Aclame:pro 70 F-----QFSTVQTYALEFGHQY-MRVIKDGALVLNSSNVIYEIATPYTEADL-------FRIKFTQSADVLTLVHPAYPP 136 (823) Q Consensus 70 F-----~~~~~~~Y~l~fg~~~-irV~~~~g~v~~t~~~~~~~~tPyt~~~l-------~~L~~~qsaD~~fIvn~~~~p 136 (823) . .....+--||+|..+| +.|.-+-..+ ...+...++. -.++.+ .-++...--....|.||...| T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (911) T protein:vir:31 76 VKEWREAWGDKDVNMLIFHAGYKVHVVQDTAPL-RDANILLTID--LLEAGIKLDGVIDSPVHISVGVGFAIITNPRIEP 152 (911) T ss_pred hhhHHHhhCCCcceEEEEecCcEEEEEecccCc-cccceEEEee--eeccCceeeeeecCceeEEeeceEEEeecCccce Confidence 0 1122344677777665 3443332211 1111111111 111110 011222222345677888877 Q ss_pred EEEEEcCCCCceeeeEEEeccccccccccceEEEEecccCCceeeec--cccccccccccceEEEcccccceecceeeee Q lcl|Aclame:pro 137 KELRRYAHDNWQLVDVVTKNGPFEDINIDESLTVYASASTGTITLTA--SASIFGAEQVGKLFYLEQPAVDSVPVWETSK 214 (823) Q Consensus 137 ~~l~r~~~~~ws~~~~~f~~~p~~~i~~~~s~t~t~~a~t~~~Tvta--s~~~~~a~~vg~~~~~~~~~~~~~~~~~~~~ 214 (823) .-+.--..++--...+.+.+. ..-+...+-.+.+..+..-+.++++ ....+++.+.. .-+....+..+......-. T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 230 (911) T protein:vir:31 153 VLIKLDDVDDEGVPTLSYEPL-TLLIRTRELLTPYTTGTNYGDTLTPEEEWNLYNSGWAT-ITRATKDKSGSGTVYVNPV 230 (911) T ss_pred EEEEeeccCccCcccccccce-eeEeeehhhccccccccccCcccCchhhccccccccee-eeeecccCCccceEEEchh Confidence 544422221111111111000 0001111111111111111112221 12222222110 0111111000000000000 Q ss_pred eeeeeeeEEe--ccceeeeEecccceeecccccCceEEEE---eceecc---cc-----ceEEEEEEecCccEEE--EEE Q lcl|Aclame:pro 215 STSIGDIRRA--DSNYYRAVTAGKTGTLRPSHTEGTSWDG---WGGSGD---DD-----TGIEWEYLHSGFGIAR--ITA 279 (823) Q Consensus 215 ~~~~~~~~~~--~~~~~~~~~~~~t~~~~~~~~~~~~~~~---~~~~~~---~~-----~~~~~~~~~~~~g~~~--~t~ 279 (823) .+........ -.-.|.++ .+.++..-..... |..... .. -++...+++....+.. +-. T Consensus 231 ~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (911) T protein:vir:31 231 QYYFDKRGVYPSHSVLYNSM-------KQESAKEIVALNVFSPWADEKINFGTTTPPLGRYIHSAYYFDSAAILSLGIGN 303 (911) T ss_pred heeecccCcCcchhhhhhhh-------hhhccceeEEEeeeccccccccccccCCCchhhhhhhheeeccceeeeecccc Confidence 0000000000 00000000 0001110000000 000000 00 0111111111110000 000 Q ss_pred ecCccccccE-----EE---Eeecccc---------ccccCcceecccCcccCCCCccEEEEEeceEEEEeC-cCCCcEE Q lcl|Aclame:pro 280 VNGTTATAEV-----IS---YIPSQVV---------GEDNASYKWAKYAWNSVNGYPGTVVYYQQRLYFAAS-TAFPQTI 341 (823) Q Consensus 280 ~~~~~~~~~~-----~~---~~~~~~~---------~~~~~t~~~~~~~w~~~~g~Ps~v~f~q~RL~f~~~-~~~p~~V 341 (823) .+..++.+.. .. ..|..+. -...++..|. ...-|+|++||.+|++|+.. +|...+| T Consensus 304 ~~~~~~~~~~~~~~p~~~e~~np~gl~~igt~~n~k~~a~~~~~~~------~~~r~r~~~~yaGRVfyaD~dkngk~rI 377 (911) T protein:vir:31 304 LTPPTSDGTTEGSGPAEEEISNPIGLDNIGTVNNLKLIAEGTVRWT------VKDRPRCSGYHNGHVYFGDRDKNGKTRI 377 (911) T ss_pred cCCCCCCCccCCCCCchhhhcCCCCcccccchhceeeeeccceeee------ecccccceeeeccEEEEeeeccCcceeE Confidence 1111111000 00 0000000 0011222222 23569999999999999953 3335699 Q ss_pred EEEcccC--------cccccccccC----CCCCcEEEEEcCCCceEEEEEeecC-cEEEEecCcEEEEecCCCccccccc Q lcl|Aclame:pro 342 WASRTGD--------YKDFGKSNPT----QDDDRIIYTYAGRQVNEIRHLIDVG-SLVALTSGGEYVITGDQNKVLTPSS 408 (823) Q Consensus 342 ~~Sr~gd--------y~nF~~~t~~----~DdD~I~~~~~~~~~~~i~~~v~~~-~Ll~~t~~~q~~l~~~~~~~lTP~~ 408 (823) .+|+.-+ |++=++++.. -|+|...+.+.+. ..|+.++.++ .|+||+.++.|.|.|.+....|.++ T Consensus 378 lFSqLv~sl~di~nCYQdaDPTSeee~DLIdTDGg~vri~ga--h~Ii~LV~~G~sLlVFcaNGVWAI~G~d~~g~TATd 455 (911) T protein:vir:31 378 LVSQLVNSLDNIPKCFQDADPTAEEINDLIATDGFTMYPVGM--GAPITMVEFNKRLLLLCTNGVWAIRGTSGGGATATD 455 (911) T ss_pred EEEeeccccccccccccCCCccccccchhhhcCCcEEecCCC--CCceEEEEecCeEEEEEeCcEEEEeccCCCceeeee Confidence 9998433 4433444322 2688888888765 5588899885 7999999999999988778999999 Q ss_pred eEEEEeecccCccc-ccEEeCCeEEEEecCCCEEEEEEeeccccceeecchH-HHHHHhcCCC-----ceEEEEEcCCCc Q lcl|Aclame:pro 409 FAFSSQGSNGSSNV-PPIAVANIALFVQEKGSVVRDLAYSFDVDGYQGNDLT-ILANHLFQKH-----SIVDWCFSIVPY 481 (823) Q Consensus 409 ~~i~~~s~~g~~~~-~Pv~vg~~v~f~~~~g~~v~e~~~~~~~d~~~~~dlt-~~~~hl~~~~-----~~~~~a~~~~p~ 481 (823) ..|.+++..||++- .-|++|+.++|+++.| |+.+.-++ -..+.++++| ..+..+.+.. ..+.--|-+.+. T Consensus 456 y~ItKIsdvGcsspNSVVvVgn~i~fWSd~G--IyaLganq-fnD~tAnNLTesTIQ~y~d~I~~dkIkNVtgtyd~de~ 532 (911) T protein:vir:31 456 FTLDKVASVEFNSPQSVVDIGTAIVFWSERG--IIAIGVND-FGDLTSNNLTENTIDEYYDSLDRDIIKNVKGTFINDEN 532 (911) T ss_pred eEEEEEeeeeeCCCCeEEEecCceEEeeCCc--EEEEeecc-cCccccccccHHHHHHHHhhcChhhhceEEEEEEccCC Confidence 99999999999764 4567899999999988 88887665 4558899998 4556665441 233445666778 Q ss_pred EEEEEEeC--C-CeEEEEE----EeccccceeEEeeccCC-ceEEEEE--EecCCCCEEEEEEEecCCCcEEEEEEeecc Q lcl|Aclame:pro 482 SSAFCIRD--D-GKLLVMT----YLRDQQVFAWAPQSSTG-KYESTCS--ISEGNEDAVYFVVNRTVNGQTVRYIERLSS 551 (823) Q Consensus 482 ~~~~~~~~--d-g~l~~~t----y~~~q~v~aW~~w~~~g-~~~~~~~--~~~~~~d~l~~~v~r~~~g~~~~~~e~~~~ 551 (823) .+.|+..+ | .+.|.+. +.-+-...+|.+|+..+ ....+-- +-+ .+.++-.=+-|. +|. .-.|.+.+ T Consensus 533 rVyW~yPn~lDe~teykt~~~~ILVfdLatgaFYPwtvs~gpLl~~p~y~Lv~-TreEvtvPi~~e-tga--iIve~gsd 608 (911) T protein:vir:31 533 RVYWVVPNKQDSNGEYKTDGELVLVLNLDTGGFYKHTVSGGPLLHAPFRRLVN-TRAEVSIPITET-DGT--VITDTLGD 608 (911) T ss_pred EEEEEecCccCCccceeecCceEEEEEeccCcccceeeecceeeccccccccc-ccccceeeEEee-cce--EEEecCCC Confidence 89998874 3 2344421 11223446999998643 2221000 000 000111100000 000 11111111 Q ss_pred ccC-CcccceeEeeee---eEE-eccccceee-eEeeccccCcCccCcceEEe------cCCeEEcccccccEEEecccC Q lcl|Aclame:pro 552 RLF-TSDEDAFFVDSG---LSY-DGRNTSDRT-MTITGGSGEWDYLAEYTISV------SGGAYFTSSDVGAQLQFPYTG 619 (823) Q Consensus 552 ~~~-~~~~~~~~lD~~---~~y-~~~~~~~~~-~~~~~~~~~l~~~~~~~v~~------~dg~~~~~~~vgg~i~l~~~~ 619 (823) +.- +...|..-+|+- +++ +|.+-.... ....+ -+.++|-.-..+.- ++..+--..+.-+-+.+||-. T Consensus 609 PV~~tl~vdttGvDg~ayLl~frdg~~g~~~f~a~~~~-~~~~dw~~~~~~~~~~y~s~~~~~y~~~~~~~~~~~~pyi~ 687 (911) T protein:vir:31 609 PVTVTRTVTTTGVDGLAYFASFDDGVNGQFNFIAEHQP-WGFADWANVPNMTRVNYSSYVDFAYEYPEVMIGNISLPYIH 687 (911) T ss_pred CeEEEEeeecccccceeEEEeeccCCcceEEEEEeecC-CeeeccccCccccccchhHHHHhhhhhhhhhhhcccCceee Confidence 000 000000000100 011 111111111 00000 00011111000110 111111111223334444444 Q ss_pred ceeEeeeEEEEEEEEeeEEecCCCceee----Eecce---eeeeeee--eeeecccccceeeecccccccceEEEEeCCc Q lcl|Aclame:pro 620 ADPDTGYEVSKELRCDIISVTSNTAVVV----RANRN---VPPSLRN--VATTNWQMARRTFGGLSHLEGQTVNILSDAN 690 (823) Q Consensus 620 ~~~~vG~~~~~~~~~~~~~~~~~~~~~~----~~~~~---v~~~~~~--~~~~~~g~~~~~~~gl~~l~g~~v~v~~dg~ 690 (823) +....|+..+. ..+..++++.- +.+.. -...|+. ...+ -|+..-.|-.-+.|.-+.|.|.--++ T Consensus 688 sy~~~~~rv~~------~~y~~~~a~~~f~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~vVNGDA 760 (911) T protein:vir:31 688 SYYLTGIRVQT------EQYTTETAHLSFHRVQAHQTTALGTVTFHKVDMMVS-TGMQVISFHKDDLLRTEAVTLVNPDA 760 (911) T ss_pred eeeeeeeEEec------cceeeecccceeEeeecccceeeeeeeeeeeeehhh-ccceeeeeccccceeeeeeEEEcCCC Confidence 43333332221 11111111110 00000 0011111 1111 11122222222223333333322222 Q ss_pred eeC---CEEEcCCEEEecCCC----cEEEEC---cccceEEEE-------------cceecCCC-Cc--ccccceeEeeE Q lcl|Aclame:pro 691 VEP---QKVVSGGAVTLESPG----AVVHIG---LPITAEFET-------------LDININGQ-ET--LLDKKQVIPSV 744 (823) Q Consensus 691 ~~~---~~~v~~g~itl~~~~----~~~~~g---l~~~~~~~~-------------l~~~~~~~-~~--~~~~~~~i~~~ 744 (823) ..| +-+|.-|..-+..++ +.-++- -+-...+|. ++.++-+- ++ .++..- -..+ T Consensus 761 E~GtmTGWtvtaG~~d~~Ta~p~~rGSyfFa~~nn~n~aL~QDIDSagaaaIDAG~v~ynvSawl~gyAaqnd~D-r~~l 839 (911) T protein:vir:31 761 ETGDATGWTVTAGTLDVRTAAPLYQGSYYFWSDSNANFAAYQDIDPVGGGYITAGELANNVIEAKLSWAARGNTD-LGTV 839 (911) T ss_pred CCCCCCcceeeccchhhccCCchhcceEeEcCCCCcchhhheeccccccceeeeccchhhhhhhhhhhccCCCCc-cceE Confidence 222 222222332221111 111110 000111111 11222111 11 111111 2346 Q ss_pred EEEEEccccEEEec---CCCceeEeeccCCCcCCCCCCcccceEEEEecC---------CcCCccEEEEEEcCC Q lcl|Aclame:pro 745 TLVVNASRGIWATT---PGGKWYEYPQREFEFYDDPVDDATGKVEVKLDS---------NWGKNGRVKIRQLDP 806 (823) Q Consensus 745 ~~~~~~s~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~tg~~~~~~~~---------~~~~~~~~~i~q~~P 806 (823) .+.+++-.|-...+ ++.....+=.|..+.--.|+. +-.++|.+.+ ||-++-++.++...- T Consensus 840 ~vEfLDAsGTVL~~tdTgr~sa~d~ltrntdt~~lP~G--TRTiRI~Lv~TrvAgndnDgYaDDISL~L~~~~~ 911 (911) T protein:vir:31 840 YIECLDAIGTVLASTDTTRFSGHDTWTRYGDAVVLPTD--TDTIRVWIVGTLVATNDVNYYVDDIQLNLEVHNV 911 (911) T ss_pred EEEEEeccCceecceecCcccceeeeecccccccCCCC--CcEEEEEEEEEEeccCccceEEeceEEEEEEecC Confidence 66666666644331 111122222222222222322 3334444332 444566666654443 No 35 >protein:vir:100022 Length: 976 # NCBI annotation: T7-like tail tubular protein B # Family: family:all:825 # MgeID: mge:1604 # MgeName: P-SSP7 # Cross-refs: genbank:acc:YP_214208;genbank:gi:61806431;genbank:GeneID:3294702 Probab=97.89 E-value=1.2e-05 Score=47.49 Aligned_cols=657 Identities=9% Similarity=0.068 Sum_probs=187.5 Q ss_pred Cceeeeecc----ccccc----------------ccccccccchH--HHHHHHHhhhhcceeeecCCceecCcceeeeee Q lcl|Aclame:pro 1 MAISWIQPS----FAGGE----------------IGPSLYGRIDM--AKYQVALRKCDNFIVRQYGGVENRPGTRFVGAA 58 (823) Q Consensus 1 M~~~~~q~s----F~~GE----------------lsP~l~~r~Dl--~ry~~q~~~~~N~~~~~~GGl~rRPGt~fva~~ 58 (823) ++--+-++. ..++. -++.....-+. .--..+...+.|+......|+.+||++.+++.+ T Consensus 162 v~~~~y~~~y~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~s~~~G~~~~~~~v~~~~f 241 (976) T protein:vir:10 162 LKATAYARQYAVNLFDNTTTTAVSTVTRIDVELIKSSNNYCDSNGAMVARTSRPSNSTRCDDSAGDGRDAYAPNVGTKVF 241 (976) T ss_pred eeeeccceEEEEEEcCCcccceeeeeeeeeeccccCCcccccccccchhhHhHhhhhhcccccccccccccCceeeeeEE Confidence 110000000 00000 01111111121 234578888999999999999999999999887 Q ss_pred cCCCCCceEEEEEECCCCeEEEEEeCCeEEEEECCce-EeeccccceEEeccccccccceeEEEEeCcEEEEEeCCceEE Q lcl|Aclame:pro 59 KYPNRKCRLIPFQFSTVQTYALEFGHQYMRVIKDGAL-VLNSSNVIYEIATPYTEADLFRIKFTQSADVLTLVHPAYPPK 137 (823) Q Consensus 59 ~~~~~~~rLipF~~~~~~~Y~l~fg~~~irV~~~~g~-v~~t~~~~~~~~tPyt~~~l~~L~~~qsaD~~fIvn~~~~p~ 137 (823) .-.++....++ ..+....|...+.+.+.+.+...+- +..-...+.. .| .++...+. ..+|+.+..++...+. T Consensus 242 ~~~~G~~~~i~-~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~--~~--~~~gt~~~--~~~~Y~~~y~~~~~v~ 314 (976) T protein:vir:10 242 NVTDGASLTDE-ANSGSYTYTIDVKDSSNNSVNRGVNLYFRIRTVGQS--VP--FTTGSGSS--ATTTYQARYTTTFDLL 314 (976) T ss_pred EeccCccceEc-CCcceEEEEeeccccceEEeecCCceEEEEccccce--ee--cccccccc--eeeeeeEEEEeEEEEe Confidence 54444444443 3333333444444444444433321 1111111111 01 01111111 2233333333222211 Q ss_pred EEEEcCCCCce---------------ee---------eEEEeccccccccccceEEEEeccc------------------ Q lcl|Aclame:pro 138 ELRRYAHDNWQ---------------LV---------DVVTKNGPFEDINIDESLTVYASAS------------------ 175 (823) Q Consensus 138 ~l~r~~~~~ws---------------~~---------~~~f~~~p~~~i~~~~s~t~t~~a~------------------ 175 (823) .+...|+ +. ..............+......+... T Consensus 315 ----~~~~g~~~~~~~~V~v~g~~Y~it~~~~~~~~~~a~~~~~~~~~t~~d~~~~~~~~~ia~~L~~~l~a~~~~~g~t 390 (976) T protein:vir:10 315 ----YGGTGWQEGDYFYVWMKDGYYKITVEAISTANVQANLGLIRPNPTPFDTETAVTAESIIGDIRTAIIATGNFTSAN 390 (976) T ss_pred ----cCCCCcccCceEEEEccccceeeEEEEeeceeEEeccccccCcCCcCcccccccHHHHHHHHHHhhcccccccceE Confidence 0011110 00 0000000000000000000110000 Q ss_pred ----CCceeeeccccccc-cccccceEEEcccccceecce--e--eeeeeeeeeeEEeccceeeeEecccceeecccccC Q lcl|Aclame:pro 176 ----TGTITLTASASIFG-AEQVGKLFYLEQPAVDSVPVW--E--TSKSTSIGDIRRADSNYYRAVTAGKTGTLRPSHTE 246 (823) Q Consensus 176 ----t~~~Tvtas~~~~~-a~~vg~~~~~~~~~~~~~~~~--~--~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~ 246 (823) ...+.+++....|. ....+..++.....+...... . ....+.+.......+.+|......+ .... T Consensus 391 v~~~g~~~~i~~~~~~~~~s~~~~~~~~~~~~~V~~~~~LP~~~~~g~~v~V~~~~~~~d~yyv~~~~~~------~~~~ 464 (976) T protein:vir:10 391 VQQIGTGLYVTRPSGTFNVTAPSSDLLRVMSGEVANVDDLPSQCKHGYVVKVANSEADADDYYVKFFGHN------NRDG 464 (976) T ss_pred EEEcCcEEEEEecCcceEecCCCceeEEEEEeeecchhhhhhhccCCcEEEEecCCCCceeEEEEeeccc------cccc Confidence 00111111111111 111111111111111100000 0 0000000000000011111100000 0011 Q ss_pred ceEEEEeceecc----ccceEEEEEEecCccEEEEEEecCcc-ccccEEEEeeccccccccCcceecc----cCcccCCC Q lcl|Aclame:pro 247 GTSWDGWGGSGD----DDTGIEWEYLHSGFGIARITAVNGTT-ATAEVISYIPSQVVGEDNASYKWAK----YAWNSVNG 317 (823) Q Consensus 247 ~~~~~~~~~~~~----~~~~~~~~~~~~~~g~~~~t~~~~~~-~~~~~~~~~~~~~~~~~~~t~~~~~----~~w~~~~g 317 (823) ...|....+... +.....+.......|.+.+..+.... ..++. ...+.++|.+.. ..|.++-. T Consensus 465 ~~~w~E~~~~g~~~g~~~~tmP~~l~~~~~g~f~~~~~~w~~r~vGd~--------~tnp~psf~g~~is~v~f~q~RL~ 536 (976) T protein:vir:10 465 DGVWEECAKPSRNIEFDKGTMPIQLVRQANGTFTVSQATWQNAEVGDE--------LTNPNPSFVGKTINQLVFFRNRLV 536 (976) T ss_pred cceEEEeeccccccccccccccEEEEecccCeEEeeeccccccccCCc--------ccCcCceecccccceEEEEcceEE Confidence 112322221111 11112233333344444444322111 11111 011111221111 01111111 Q ss_pred CccEEEEEeceEEEEeCcCCCcEEEEEc-----ccCcccccccccCCCCCcEEEEEcCCCceEEEEEeecCcEEEEecCc Q lcl|Aclame:pro 318 YPGTVVYYQQRLYFAASTAFPQTIWASR-----TGDYKDFGKSNPTQDDDRIIYTYAGRQVNEIRHLIDVGSLVALTSGG 392 (823) Q Consensus 318 ~Ps~v~f~q~RL~f~~~~~~p~~V~~Sr-----~gdy~nF~~~t~~~DdD~I~~~~~~~~~~~i~~~v~~~~Ll~~t~~~ 392 (823) + ++ .+++|+...-. ....+-+- -.|..++..++ ...+.|...+..++. ..+...+.-++++.++ T Consensus 537 f---~s--~~~v~~Srtgd-~~nF~~~t~~~~~DdD~I~~~~ss--~~~~~i~~~v~~~~~---L~l~T~g~e~~lsg~~ 605 (976) T protein:vir:10 537 F---LS--DENVIMSRPGE-FFNFWSKTATTFTPQDVIDLSCSS--TYPAIVYDGIQVNAG---LLLFTKNQQFMLTTDS 605 (976) T ss_pred E---ec--CCeEEEEecCC-ccccccccccCCCCCccEEEEecC--CcceeeEEEEecCCc---EEEEecCceEEEecCC Confidence 1 11 34555544332 11122111 12233332222 223344443332211 0011111122222111 Q ss_pred EEEEecCCCccccccc-e----EEEEeecccC-cccccEE--e------------------------------------- Q lcl|Aclame:pro 393 EYVITGDQNKVLTPSS-F----AFSSQGSNGS-SNVPPIA--V------------------------------------- 427 (823) Q Consensus 393 q~~l~~~~~~~lTP~~-~----~i~~~s~~g~-~~~~Pv~--v------------------------------------- 427 (823) + .|++. +-.|.+.+ . .++++.--++ --+++.. + T Consensus 606 ~-~lTP~-t~~i~~~s~~~~~~~v~Pv~vG~~v~Fv~~~g~~~r~~~~~~~~~~~~~~~~dlt~~~~~l~~g~~~~~a~~ 683 (976) T protein:vir:10 606 D-ILSPE-TAKINAVSSYNFNEKTHPVSLGTTVAFIDNANQFTRFFEMSNVVRQGEPDVVDQSKVISRLLDKNISLVSVS 683 (976) T ss_pred c-eecce-eEEEEEEEeeeccCCCccEEeCCeEEEEecCCCeEEEEEEeecccccccchhHHHHHhhhhcCCceEEEEEc Confidence 1 11111 00011110 0 0011100000 0011000 0 Q ss_pred --CCeEEEEecCCCEEEEEEeeccccceeecchHHHHHHhcCCCceEEEEEcCCCcEEEEEEeCCCeEEEEEEeccccce Q lcl|Aclame:pro 428 --ANIALFVQEKGSVVRDLAYSFDVDGYQGNDLTILANHLFQKHSIVDWCFSIVPYSSAFCIRDDGKLLVMTYLRDQQVF 505 (823) Q Consensus 428 --g~~v~f~~~~g~~v~e~~~~~~~d~~~~~dlt~~~~hl~~~~~~~~~a~~~~p~~~~~~~~~dg~l~~~ty~~~q~v~ 505 (823) ...++|..+.-..+.-+.|-... ..+++.--+.|-+.| .+..+|.. ++.+.++++..+ T Consensus 684 ~~~~~vv~~~~~~g~l~~~ty~~~~---~eq~v~aWsr~~~~G-~v~sv~~i--~D~ly~vV~r~~-------------- 743 (976) T protein:vir:10 684 RENSVVFFSQKDTDKIYCFRYFTSG---EKRLLQAWTTWTITG-NIQYHCML--DDALYVVTRNNN-------------- 743 (976) T ss_pred CCCcEEEEEEcCCCEEEEEEEeecC---CceeEEeeEEEecCC-cEEEEEEe--CCeEEEEEEecC-------------- Confidence 01111111111122222211000 111111222222222 12222211 111111111111 Q ss_pred eEEeeccCCceEEEEEEecCCCCEEEEEEEecCCCcEEEEEEeeccccCC--cccceeEeeeeeEEeccccce-eeeEee Q lcl|Aclame:pro 506 AWAPQSSTGKYESTCSISEGNEDAVYFVVNRTVNGQTVRYIERLSSRLFT--SDEDAFFVDSGLSYDGRNTSD-RTMTIT 582 (823) Q Consensus 506 aW~~w~~~g~~~~~~~~~~~~~d~l~~~v~r~~~g~~~~~~e~~~~~~~~--~~~~~~~lD~~~~y~~~~~~~-~~~~~~ 582 (823) ...+--+++|-... ...+|.+...... ...++.|||++.++.....+. .....+ T Consensus 744 ---------------------~g~~~r~~e~~~~~--~~~~~~~~~~~~~~~~~~~~~~lD~~~~~~~~~~t~~~~t~~t 800 (976) T protein:vir:10 744 ---------------------KDQIVKYSLKLDDA--GHFVTDTQGTTSTDDDSIYRVHLDHSSSVTAASNTYNTTTIKT 800 (976) T ss_pred ---------------------CeEEEEEEEEECCc--cceeeeccCccccccCCcceeeeccceEEEeccccccCCceeE Confidence 11222222221110 1123333322222 223356788877664221110 000000 Q ss_pred -ccccCcCccCcceEEe-cCCeEE-----cccccccEEEec--ccCceeEeeeEEEEEEEEeeEEecCCCceeeEeccee Q lcl|Aclame:pro 583 -GGSGEWDYLAEYTISV-SGGAYF-----TSSDVGAQLQFP--YTGADPDTGYEVSKELRCDIISVTSNTAVVVRANRNV 653 (823) Q Consensus 583 -~~~~~l~~~~~~~v~~-~dg~~~-----~~~~vgg~i~l~--~~~~~~~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~v 653 (823) -....+.+..+..+.+ +|+... ...+.++.|+|+ ++++.++||++|+++++++++.+..+.+......+.. T Consensus 801 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~v~g~~i~l~g~~~~~~v~VGl~Y~s~~~~~~~~i~~~~g~~~~~~~~g 880 (976) T protein:vir:10 801 TIPKPNGYESTKQLVAYDTDAGNDLGRYALVTVSGSNLEIPGNWSNNSFIIGYLYEMDVQLPTLYVTQQVGDKYRSDAKS 880 (976) T ss_pred EeecCccccCceeEEEEecccCcccccceeeeecCCeeEecCCCCCCeEEEeeeeEEEEeecceeEEeCCCCccccccee Confidence 0011223334444433 444321 123448899996 6788999999999999999999876654333322222 Q ss_pred eeeeeeeeeecccccc--eeee---cccccccceEEEEeCCceeCCEEEcCCEEEecC--CCcEEEECcccceEEEEcce Q lcl|Aclame:pro 654 PPSLRNVATTNWQMAR--RTFG---GLSHLEGQTVNILSDANVEPQKVVSGGAVTLES--PGAVVHIGLPITAEFETLDI 726 (823) Q Consensus 654 ~~~~~~~~~~~~g~~~--~~~~---gl~~l~g~~v~v~~dg~~~~~~~v~~g~itl~~--~~~~~~~gl~~~~~~~~l~~ 726 (823) +.+++++......... ..+. .-++.+.+...-..+-..-+.-..+++..++|- .+....+ .+.++ .+||+ T Consensus 881 Rl~i~r~~~~~~~tg~~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~~~~vP~~~~~~~~~v--~i~~d-~PlP~ 957 (976) T protein:vir:10 881 SLIVHRIKFSFGPLGVYSTTIQRDGKPDFTETKELGLAGVVGASRLPIVPEVIETVPCYERNTNLKV--NVKSE-HPAPA 957 (976) T ss_pred eEEEEEEEEEeecccceEEEEcCCCCccccccccccccCcccccccceecCcEEEEEeccCCceeEE--EEEEC-CCCce Confidence 2233332222111110 0111 111111211111000000001112234334432 2333332 22222 44554 Q ss_pred ecCC---CCc-ccccceeE Q lcl|Aclame:pro 727 NING---QET-LLDKKQVI 741 (823) Q Consensus 727 ~~~~---~~~-~~~~~~~i 741 (823) .+-+ .|. .+-+.||| T Consensus 958 tilsi~~eg~yn~r~~r~~ 976 (976) T protein:vir:10 958 TLYSLAWEGDFTNRFYKRV 976 (976) T ss_pred EEEEEEEEEEeccceeecC Confidence 4322 232 23344445 No 36 >protein:vir:2203 Length: 794 # NCBI annotation: tail tubular protein B # Family: family:all:825 # MgeID: mge:49 # MgeName: T7 # Cross-refs: genbank:acc:NP_042000;swissprot:sw:p03747;genbank:gi:9627472;uniprot:P03747;genbank:GeneID:1261024 Probab=96.96 E-value=0.00023 Score=40.48 Aligned_cols=620 Identities=9% Similarity=0.007 Sum_probs=183.3 Q ss_pred Cceeeeec----ccccccccccccccchHHHHHHHHhhhhcceeeecCCceecCccee-----ee--eecCCCCCce--- Q lcl|Aclame:pro 1 MAISWIQP----SFAGGEIGPSLYGRIDMAKYQVALRKCDNFIVRQYGGVENRPGTRF-----VG--AAKYPNRKCR--- 66 (823) Q Consensus 1 M~~~~~q~----sF~~GElsP~l~~r~Dl~ry~~q~~~~~N~~~~~~GGl~rRPGt~f-----va--~~~~~~~~~r--- 66 (823) ..++..|. =+...+.-|....|..-..+.+-- .-.+...-+|.-.|.=..- .+ .+.+...... T Consensus 114 ~~l~~~q~aD~~fi~~~~~~p~~~~~~~~~~~~~~~---~~g~v~v~~g~y~~ty~v~I~~~~~a~~~~p~gt~~~~~~~ 190 (794) T protein:vir:22 114 NDLRMVTVADYTFIVNRNVVAQKNTKSVNLPNYNPN---QDGLINVRGGQYGRELIVHINGKDVAKYKIPDGSQPEHVNN 190 (794) T ss_pred ccEEEEEEcCEEEEEcCCeeeeEeeccccCCCCCCC---ceEEEEccCCccceeEEEEeccCcceEEEEcCCCcccccee Confidence 12333331 123444445444442211110000 0000000111000000000 00 0000000000 Q ss_pred ---------EEEEEECCCCeEEEEEeCCeEEEEECCceEeeccccceEEec--cccccccce-eEEEEeCcEEEEEeC-C Q lcl|Aclame:pro 67 ---------LIPFQFSTVQTYALEFGHQYMRVIKDGALVLNSSNVIYEIAT--PYTEADLFR-IKFTQSADVLTLVHP-A 133 (823) Q Consensus 67 ---------LipF~~~~~~~Y~l~fg~~~irV~~~~g~v~~t~~~~~~~~t--Pyt~~~l~~-L~~~qsaD~~fIvn~-~ 133 (823) |..-.....-.+-+..++++++|...++.... ++.+ -|....... .+.+|....+=.-++ . T Consensus 191 ~~~~~ia~~L~~~l~~~~~~~t~~~~~~~~~i~a~~~~~~~------~~t~~~g~~~t~~~~~~~~~~~~~~lp~~~~~G 264 (794) T protein:vir:22 191 TDAQWLAEELAKQMRTNLSDWTVNVGQGFIHVTAPSGQQID------SFTTKDGYADQLINPVTHYAQSFSKLPPNAPNG 264 (794) T ss_pred echhhhhhhhhhhheeccccceEEeCCceEEEEEcCCceEE------EEeeecccCcceeEEEEeccccceeccccCCCC Confidence 00000011113344444555555544332111 0110 010000000 000110000000000 0 Q ss_pred ceEEEEEEcC--CCCceeeeEEEeccccccccccceEEEEecccCCceeeeccccccccccccceEEEcccccceeccee Q lcl|Aclame:pro 134 YPPKELRRYA--HDNWQLVDVVTKNGPFEDINIDESLTVYASASTGTITLTASASIFGAEQVGKLFYLEQPAVDSVPVWE 211 (823) Q Consensus 134 ~~p~~l~r~~--~~~ws~~~~~f~~~p~~~i~~~~s~t~t~~a~t~~~Tvtas~~~~~a~~vg~~~~~~~~~~~~~~~~~ 211 (823) +.+ ++.-.+ ..+|....+.-..+-+. ..+..+..+ .+-..-+...+.+.... T Consensus 265 ~~v-~i~~~~~~~~~~Y~v~~~~~~~~w~-----------e~~~~~~~~-----~~~~~t~p~~lv~~~~~--------- 318 (794) T protein:vir:22 265 YMV-KIVGDASKSADQYYVRYDAERKVWT-----------ETLGWNTED-----QVLWETMPHALVRAADG--------- 318 (794) T ss_pred eEE-EEEeCCCCCcceeEEEEeccceEEE-----------Eeeecccee-----eecccceeeEeeeccCC--------- Confidence 111 111100 01111100000000000 000000000 00000000000000000 Q ss_pred eeeeeeeeeeEEeccceeeeEecccceeecccccCceEEEEeceeccccceEEEEEEecCccEEEEEEecCccccccEEE Q lcl|Aclame:pro 212 TSKSTSIGDIRRADSNYYRAVTAGKTGTLRPSHTEGTSWDGWGGSGDDDTGIEWEYLHSGFGIARITAVNGTTATAEVIS 291 (823) Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~~~~~~~~~~~ 291 (823) .+.. ...+ +.....|...+. |-.+-...+.. .-.....+........ -+-+..+. ... T Consensus 319 ---~~~~-----~~~~-w~~r~~Gd~~tn-p~psf~g~~i~------~v~f~q~RL~f~~~~~-v~~Srtgd-----~~n 376 (794) T protein:vir:22 319 ---NFDF-----KWLE-WSPKSCGDVDTN-PWPSFVGSSIN------DVFFFRNRLGFLSGEN-IILSRTAK-----YFN 376 (794) T ss_pred ---cEEE-----eecc-ccccccCccccC-CcceecCCCcc------eEEEEcceEEEecCCe-EEEEccCC-----ccc Confidence 0000 0000 000000000000 00000000000 0000000101111000 01110000 000 Q ss_pred Eeecccc-ccccCcceecccCcccCCCCccEEEEEeceEEEEeCcCCCcEEEEEcccCcccccccccCCCCCcEEEEEcC Q lcl|Aclame:pro 292 YIPSQVV-GEDNASYKWAKYAWNSVNGYPGTVVYYQQRLYFAASTAFPQTIWASRTGDYKDFGKSNPTQDDDRIIYTYAG 370 (823) Q Consensus 292 ~~~~~~~-~~~~~t~~~~~~~w~~~~g~Ps~v~f~q~RL~f~~~~~~p~~V~~Sr~gdy~nF~~~t~~~DdD~I~~~~~~ 370 (823) +.+.... ..++...+. ..=++...-...+..++.-|++..... | ..+|.. + =+.+++. .|.....- T Consensus 377 F~~~t~~~~~DdD~i~~--~~ss~~~~~i~~~v~~~~~L~i~t~~~--e-~~l~~~-~--~lTP~~~-----~~~~~s~~ 443 (794) T protein:vir:22 377 FYPASIANLSDDDPIDV--AVSTNRIAILKYAVPFSEELLIWSDEA--Q-FVLTAS-G--TLTSKSV-----ELNLTTQF 443 (794) T ss_pred cccccCcCCCCCccEEE--EecCCcceeeEEEeecCCcEEEEecCc--E-EEEeCC-C--cccceeE-----EEEEEEEe Confidence 1111100 000110111 000111111233444544454444332 2 233321 1 1222221 01111110 Q ss_pred CCceEEEEEeecCcEEEEecCcEE------EEecCCCccccccceEEEEeecc--cCcccccE-EeCCeEEEEecCCCEE Q lcl|Aclame:pro 371 RQVNEIRHLIDVGSLVALTSGGEY------VITGDQNKVLTPSSFAFSSQGSN--GSSNVPPI-AVANIALFVQEKGSVV 441 (823) Q Consensus 371 ~~~~~i~~~v~~~~Ll~~t~~~q~------~l~~~~~~~lTP~~~~i~~~s~~--g~~~~~Pv-~vg~~v~f~~~~g~~v 441 (823) .-.+.++=+.-.+.++.....+.| ......++......+++...-.+ +.-...-. .-...++++......| T Consensus 444 ~~~~~~~Pv~vg~~v~f~~~~g~~~~~~r~~~~~~~~d~y~~~Dlt~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l 523 (794) T protein:vir:22 444 DVQDRARPFGIGRNVYFASPRSSFTSIHRYYAVQDVSSVKNAEDITSHVPNYIPNGVFSICGSGTENFCSVLSHGDPSKI 523 (794) T ss_pred eccCCCCceEeCCeEEEEecCCCeeEEEEeEeeecccCceehhhHHHHHHHhcCCceEEEEEeCCCCcEEEEEEcCCCEE Confidence 111112222333455555555533 11111111211111111000000 00000000 0123466666666777 Q ss_pred EEEEeeccccceeecchHHHHHHhcCCCceEEEEEcCCCcEEEEEEeCCCeEEEEEEeccccceeEEeeccCCceEEEEE Q lcl|Aclame:pro 442 RDLAYSFDVDGYQGNDLTILANHLFQKHSIVDWCFSIVPYSSAFCIRDDGKLLVMTYLRDQQVFAWAPQSSTGKYESTCS 521 (823) Q Consensus 442 ~e~~~~~~~d~~~~~dlt~~~~hl~~~~~~~~~a~~~~p~~~~~~~~~dg~l~~~ty~~~q~v~aW~~w~~~g~~~~~~~ 521 (823) .-+.|-... .-+++.--+.|-+.+. +..+|.....+.+.++++..+..+...|.. .+...++.++ T Consensus 524 ~~~~y~~~~---~e~~v~aW~~~~~~g~-~~~~~~~~~~d~l~~iv~r~~~~~~~r~~~-----~~~~~~~~~~------ 588 (794) T protein:vir:22 524 FMYKFLYLN---EELRQQSWSHWDFGEN-VQVLACQSISSDMYVILRNEFNTFLARISF-----TKNAIDLQGE------ 588 (794) T ss_pred EEEEEeecC---CceeEEeeEEEEcCCC-EEEEEEEecCCEEEEEEEeCCCEEEEEEEE-----eeccccCCCc------ Confidence 666654221 1233444556666653 444443333344444455444443333321 1111111111 Q ss_pred EecCCCCEEEEEEEecCCCcEEEEEEeeccccCCcccceeEeeeeeEEeccccceeeeEeeccccCcCccCcceEEe-cC Q lcl|Aclame:pro 522 ISEGNEDAVYFVVNRTVNGQTVRYIERLSSRLFTSDEDAFFVDSGLSYDGRNTSDRTMTITGGSGEWDYLAEYTISV-SG 600 (823) Q Consensus 522 ~~~~~~d~l~~~v~r~~~g~~~~~~e~~~~~~~~~~~~~~~lD~~~~y~~~~~~~~~~~~~~~~~~l~~~~~~~v~~-~d 600 (823) .+.. +|| +.-+++++++..+.+.+.+.... ....++.|++|+++.+ +| T Consensus 589 -----~~~~-----------------~lD------~~~~~~~~~g~~~~~~~~t~~~~---~~~~g~~~~~g~~v~~~~d 637 (794) T protein:vir:22 589 -----PYRA-----------------FMD------MKIRYTIPSGTYNDDTFTTSIHI---PTIYGANFGRGKITVLEPD 637 (794) T ss_pred -----ccee-----------------eee------eeEEEeeccceeecCCcceEEEc---ccccCcccccceEEEEEcC Confidence 0001 111 11134566666555555443221 1224688999999987 88 Q ss_pred CeEEccccc-c-----cEEEe--cccCceeEeeeEEEEEEEEeeEEecCCCceeeEecc-eeeeeeeeeeeeccccccee Q lcl|Aclame:pro 601 GAYFTSSDV-G-----AQLQF--PYTGADPDTGYEVSKELRCDIISVTSNTAVVVRANR-NVPPSLRNVATTNWQMARRT 671 (823) Q Consensus 601 g~~~~~~~v-g-----g~i~l--~~~~~~~~vG~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~~g~~~~~ 671 (823) |.+.....+ + ..+++ +.++++++||++|+++++++++++..+.+....... .-+.++++...... ..+.. T Consensus 638 g~~~~~~~~~~~~~~~~~~~v~~~~~~~~v~VGl~y~s~~~~~~~~~~~~~~~~~~~~~~~grl~l~r~~~~~~-~tg~~ 716 (794) T protein:vir:22 638 GKITVFEQPTAGWNSDPWLRLSGNLEGRMVYIGFNINFVYEFSKFLIKQTADDGSTSTEDIGRLQLRRAWVNYE-NSGTF 716 (794) T ss_pred CceeeceeeeeeeeccceEEeCCCCCCcEEEEeeeeeEEEEecceEEEecCCCccceeeecceEEEEEEEEEec-cccce Confidence 877655433 1 23444 578999999999999999999999876543322111 11122333221111 11110 Q ss_pred eecccccccceEEEEeCC-------ceeCCEEEcCCEEEecCC--CcEEEECcccceEEEEcceecCC---CCcccccce Q lcl|Aclame:pro 672 FGGLSHLEGQTVNILSDA-------NVEPQKVVSGGAVTLESP--GAVVHIGLPITAEFETLDINING---QETLLDKKQ 739 (823) Q Consensus 672 ~~gl~~l~g~~v~v~~dg-------~~~~~~~v~~g~itl~~~--~~~~~~gl~~~~~~~~l~~~~~~---~~~~~~~~~ 739 (823) --.+... ++.-.....| ...+...+..|.+++|-. +....+ -+.++ .+||..+-+ .|.-.-|.| T Consensus 717 ~v~v~~~-~~~~~~~~~~~~~g~~~~~~g~~~~~tg~~~vp~~~~~~~~~v--~i~~d-~p~P~tvlsi~~eg~y~~r~~ 792 (794) T protein:vir:22 717 DIYVENQ-SSNWKYTMAGARLGSNTLRAGRLNLGTGQYRFPVVGNAKFNTV--YILSD-ETTPLNIIGCGWEGNYLRRSS 792 (794) T ss_pred EEEEcCC-CcccceeecCceecccccccCcccccCceEEEEecccCceEEE--EEEEC-CCCCEEEEEEeEEEEEecccc Confidence 0011111 1111111122 222233334566666542 233332 33333 566665432 355666777 Q ss_pred eE Q lcl|Aclame:pro 740 VI 741 (823) Q Consensus 740 ~i 741 (823) || T Consensus 793 ~v 794 (794) T protein:vir:22 793 GI 794 (794) T ss_pred CC Confidence 77 No 37 >protein:vir:94583 Length: 792 # NCBI annotation: Tubular tail protein B # Family: family:all:825 # MgeID: mge:1516 # MgeName: Berlin # Cross-refs: genbank:acc:YP_919014;genbank:gi:119637778;genbank:GeneID:5179343 Probab=96.86 E-value=0.00029 Score=39.95 Aligned_cols=642 Identities=11% Similarity=0.023 Sum_probs=182.6 Q ss_pred Cceeeeec-ccccccccccccccchHHHHH-HHHhhhhcceeeecCCceecCcceeeeeecCCCCCceEEEEEECCCCeE Q lcl|Aclame:pro 1 MAISWIQP-SFAGGEIGPSLYGRIDMAKYQ-VALRKCDNFIVRQYGGVENRPGTRFVGAAKYPNRKCRLIPFQFSTVQTY 78 (823) Q Consensus 1 M~~~~~q~-sF~~GElsP~l~~r~Dl~ry~-~q~~~~~N~~~~~~GGl~rRPGt~fva~~~~~~~~~rLipF~~~~~~~Y 78 (823) .+-..+.+ .|.+.|-==...+...+..|. .+.+.+.+. ..-++.. .+ ... -|.|.-.++..| T Consensus 61 ~~~~~l~~~~~~~~q~y~l~f~~~~~rv~~~~g~~~~~~~------------~~~y~~~-~~--~~~-~l~~~q~aD~~f 124 (792) T protein:vir:94 61 GAKPLVHLINRDSAEQYYVVFTGQGVRVFDLNGKEYDVKG------------DLSYVKV-EN--PRD-DLRMVTVADYTF 124 (792) T ss_pred CcccEEEEEEeCCCceEEEEEcCCeEEEEecCCceEEecc------------cCceeee-cC--Ccc-eeEEEEEcCEEE Confidence 00011111 222221000000000000000 011111000 0111100 00 000 012222222222 Q ss_pred EEEEeCCeEE----------------EEECCce-----EeeccccceEEeccccccccceeEEEEeCcEEEEEeCCceEE Q lcl|Aclame:pro 79 ALEFGHQYMR----------------VIKDGAL-----VLNSSNVIYEIATPYTEADLFRIKFTQSADVLTLVHPAYPPK 137 (823) Q Consensus 79 ~l~fg~~~ir----------------V~~~~g~-----v~~t~~~~~~~~tPyt~~~l~~L~~~qsaD~~fIvn~~~~p~ 137 (823) ++-- +.-++ |+-.+|. .+...+......+|. .+.++.+..+++++.+. T Consensus 125 i~n~-~~~~~~~~~~~~~~~~~~~~~v~i~~g~y~~~y~i~i~~~~~~~~~~~----------~t~~~~~~~~~~~~i~~ 193 (792) T protein:vir:94 125 IVNR-NMVVRPDTTPLYTLKENGDCLINIRGGMYGRTLAFTINNTKIAYEIAH----------GDAPEHSKQTDAQWLVK 193 (792) T ss_pred EEeC-CccceeEecCcCCCCCCceEEEEccCCCcceeEEEEecCceeeeeeec----------Ccccceecccchhhhhh Confidence 2210 00000 0000000 000000111111121 12223333455666667 Q ss_pred EEEEcCCCCceeeeEEEecccc-ccccccceEE---EEe-cccCCce--eeeccc---cccccc-cccceEEEcccccce Q lcl|Aclame:pro 138 ELRRYAHDNWQLVDVVTKNGPF-EDINIDESLT---VYA-SASTGTI--TLTASA---SIFGAE-QVGKLFYLEQPAVDS 206 (823) Q Consensus 138 ~l~r~~~~~ws~~~~~f~~~p~-~~i~~~~s~t---~t~-~a~t~~~--Tvtas~---~~~~a~-~vg~~~~~~~~~~~~ 206 (823) +|.+....+|.+....+...+. ..+....+.. ... .+..+.. .+.... .-..+. ..|....+....... T Consensus 194 ~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~g~~~~~~~~~~~~v~~~~~lp~~~~~G~~v~i~~~~~~~ 273 (792) T protein:vir:94 194 KLAGLARLNVAFKGWTFTEGPGYIHVIAPSNSQINSLSTEDGYADQLMNAVMHTSQSFSRLPVEAPNGYTVKIVGDTSKT 273 (792) T ss_pred hhhhhccccccccccEEEECCeEEEEEecCCceeeeeecccCcCcceeeeeeecccccccccccCCCCcEEEEEccCCCC Confidence 7766665666655554433222 1111111111 000 0000000 000000 000001 112222222111110 Q ss_pred ec-----------ceeeeeeeeeeeeEEecc-ceeee-E-ecccceeecccc-cCceEEEE-------eceecccc-ceE Q lcl|Aclame:pro 207 VP-----------VWETSKSTSIGDIRRADS-NYYRA-V-TAGKTGTLRPSH-TEGTSWDG-------WGGSGDDD-TGI 263 (823) Q Consensus 207 ~~-----------~~~~~~~~~~~~~~~~~~-~~~~~-~-~~~~t~~~~~~~-~~~~~~~~-------~~~~~~~~-~~~ 263 (823) .+ .|...... +.....+. ..... + ....+..+.... .....++. ..+..... ... T Consensus 274 ~d~y~v~~~~~~~~w~E~~~~--~~~~~~~~~tmp~~lv~~~~~~~~~~~~~w~~r~~gd~~tnp~psf~g~~i~~v~f~ 351 (792) T protein:vir:94 274 SDMFYVQYDNMKKVWKEVAGW--GVQKGLNGGTMPHALVRQADGSFQMQVLPWTQRTCGDMDTNPTPSIVDQKINDVFFF 351 (792) T ss_pred ccceEEEEEcCCceEEEeccc--ceeeeecccccCeeEEEcCCCcEEEEeccccccccCccccCccceeccCCcceEEEE Confidence 00 01000000 00000000 00000 0 000000000000 00000000 00000000 000 Q ss_pred EEEEEecCccEEEEEEecCccccccEEEEeeccccc-cccCcceecccCcccCCCCccEEEEEeceEEEEeCcCCCcEEE Q lcl|Aclame:pro 264 EWEYLHSGFGIARITAVNGTTATAEVISYIPSQVVG-EDNASYKWAKYAWNSVNGYPGTVVYYQQRLYFAASTAFPQTIW 342 (823) Q Consensus 264 ~~~~~~~~~g~~~~t~~~~~~~~~~~~~~~~~~~~~-~~~~t~~~~~~~w~~~~g~Ps~v~f~q~RL~f~~~~~~p~~V~ 342 (823) ..+..... +. +..-+.+. +...+.+..... .++.-.+. ..=++...-...+..++.-|++..... | .. T Consensus 352 q~RL~f~~-~~---~v~~Srtg--d~~nF~~~t~~~~~DdD~I~~--~~ss~~~~~i~~~v~~~~~L~l~T~~~--q-~~ 420 (792) T protein:vir:94 352 RNRLGFLA-GE---NIVMSRTS--KYFSLFPASVANLSDDDPIDV--AVSHNRISILKYAVPFSEELLLWSDQA--Q-FV 420 (792) T ss_pred cceEEEec-CC---eEEEEccC--CcccCccccccCCCCCccEEE--EecCCcceeeeEEeecCCcEEEEecCc--E-EE Confidence 00000000 00 00000100 000111110000 00000000 000111011123334544444443332 2 22 Q ss_pred EEcccCcccccccccCCCCCcEEEEEcCCCceEEEEEeecCcEEEEecCcEE------EEecCCCccccccceEEEEeec Q lcl|Aclame:pro 343 ASRTGDYKDFGKSNPTQDDDRIIYTYAGRQVNEIRHLIDVGSLVALTSGGEY------VITGDQNKVLTPSSFAFSSQGS 416 (823) Q Consensus 343 ~Sr~gdy~nF~~~t~~~DdD~I~~~~~~~~~~~i~~~v~~~~Ll~~t~~~q~------~l~~~~~~~lTP~~~~i~~~s~ 416 (823) +|.. + =+.+++. .|.....-.-.+.++=+.-.+.++.....+.| ......++......+++...-. T Consensus 421 l~~~-~--~lTP~~~-----~i~~~s~~~~~~~~~Pv~vG~~v~Fv~~~g~~~~v~r~~~~~~~~d~y~a~DlT~~~~hl 492 (792) T protein:vir:94 421 LSAQ-G--ILSPKSV-----ELNLTTEFDVSDRARPFGVGRGVYFASPRASYTSLNRYYAVQDVSSVKSAEDMSAHVPNY 492 (792) T ss_pred EeCC-C--cccceeE-----EEEEEEEeeccCCCCceEeCCeEEEeecCCCeeEEEeeeeeccccCceehhhHHHHHHHh Confidence 2321 1 1222221 01111110111122222223445544555533 1111111221111111100000 Q ss_pred cc--CcccccE-EeCCeEEEEecCCCEEEEEEeeccccceeecchHHHHHHhcCCCceEEEEEcCCCcEEEEEEeCCCeE Q lcl|Aclame:pro 417 NG--SSNVPPI-AVANIALFVQEKGSVVRDLAYSFDVDGYQGNDLTILANHLFQKHSIVDWCFSIVPYSSAFCIRDDGKL 493 (823) Q Consensus 417 ~g--~~~~~Pv-~vg~~v~f~~~~g~~v~e~~~~~~~d~~~~~dlt~~~~hl~~~~~~~~~a~~~~p~~~~~~~~~dg~l 493 (823) +. .-...-. .-...+++..+.-..+.-+.|-..... +++..-+.|-+.|. +..+|.....+.+.++++..+.. T Consensus 493 ~~~~v~~~~a~~~~~~~vv~~~~~~g~l~~~ty~~~~~e---~~v~aW~~~~~~g~-~~~~~~~~~~D~l~~~v~r~~~~ 568 (792) T protein:vir:94 493 IPNGVFSIRGSSTENFISVLSSNAPSRIFLYKFLYLNEE---IAQQSWSHWELGSN-VTVLACDSIGSTMYLVLRNQSHT 568 (792) T ss_pred cCCceEEEEEeCCCCcEEEEEEcCCCeEEEEEEeecCCc---eEEEeEEEEEcCCc-EEEEEEeecCCEEEEEEEeCCCE Confidence 00 0000000 012245566555566766666422111 22334456666653 33344333334444444444444 Q ss_pred EEEEEeccccceeEEeeccCCceEEEEEEecCCCCEEEEEEEecCCCcEEEEEEeeccccCCcccceeEeeeeeEEeccc Q lcl|Aclame:pro 494 LVMTYLRDQQVFAWAPQSSTGKYESTCSISEGNEDAVYFVVNRTVNGQTVRYIERLSSRLFTSDEDAFFVDSGLSYDGRN 573 (823) Q Consensus 494 ~~~ty~~~q~v~aW~~w~~~g~~~~~~~~~~~~~d~l~~~v~r~~~g~~~~~~e~~~~~~~~~~~~~~~lD~~~~y~~~~ 573 (823) +...|...++ --++ +...+.+++=.. ++.. ..+..|.+.+ T Consensus 569 ~~~r~~~~~~-----~~d~-----------~~~~~~~~lD~~----------~~~~-------~~~~~~~~~~------- 608 (792) T protein:vir:94 569 WMCRAHFTKN-----SIDF-----------PDEPYRLYIDNK----------VKYV-------IPEGSYNDDT------- 608 (792) T ss_pred EEEEEEEeec-----cccc-----------CCCcceeeeeee----------eeEE-------ecCcceecCc------- Confidence 3333211100 0000 001111111110 1110 0111122211 Q ss_pred cceeeeEeeccccCcCccCcceEEe-cCCeEEc---cc-c---cccEEEec--ccCceeEeeeEEEEEEEEeeEEecCCC Q lcl|Aclame:pro 574 TSDRTMTITGGSGEWDYLAEYTISV-SGGAYFT---SS-D---VGAQLQFP--YTGADPDTGYEVSKELRCDIISVTSNT 643 (823) Q Consensus 574 ~~~~~~~~~~~~~~l~~~~~~~v~~-~dg~~~~---~~-~---vgg~i~l~--~~~~~~~vG~~~~~~~~~~~~~~~~~~ 643 (823) ....... ....++.|++|++|.+ +||.... .. . .++.|+++ .++++++||++|+++++++++.+..+. T Consensus 609 ~~T~~~~--~~~~gl~~l~G~~v~v~~dG~~~~~~~~~~~~~~~~~~i~~~g~~~a~~v~VGl~y~~~~~~~~~~~~~~~ 686 (792) T protein:vir:94 609 YATTVKP--VDVYGMKYWTGKFYIVASDGLVSWFEPPRGGWPNGVPMLTMSGNREGETIYVGLAISFRYVFSKFLIKKTA 686 (792) T ss_pred eeeeecc--ccccCcccccCcEEEEEecCceeEeecccceecCCccEEEecCCccCCeEEEeeeeeEEEEeccceeeccC Confidence 1111111 1124799999999987 8886542 21 1 25677776 779999999999999999999887654 Q ss_pred ceeeEe-cceeeeeeeeeeeecccccceeeecccccccceEEEEeCCceeC-------CEEEcCCEEEecCC--CcEEEE Q lcl|Aclame:pro 644 AVVVRA-NRNVPPSLRNVATTNWQMARRTFGGLSHLEGQTVNILSDANVEP-------QKVVSGGAVTLESP--GAVVHI 713 (823) Q Consensus 644 ~~~~~~-~~~v~~~~~~~~~~~~g~~~~~~~gl~~l~g~~v~v~~dg~~~~-------~~~v~~g~itl~~~--~~~~~~ 713 (823) +..... ....+.+++++..... ..+..--++.. .++++.+...+...+ ...+..|.+++|-. +.... T Consensus 687 g~~~~~~~~~gr~rl~r~~~~~~-~tg~~~v~~~~-~~~~~~~~~~~~~~~~~~~~~g~~~~~tg~~~vp~~g~~~~~~- 763 (792) T protein:vir:94 687 DDGSIATEDIGRLQLRRAWVNYE-DSGAFTVEVEN-TSRLFSYDMAGARLGSNVLRAGGLNVGTGQFRFPVTGNAQLNE- 763 (792) T ss_pred CCcCccccceeeEEEEEEEEeee-ccceeEEEEcC-CCcceeeeeccceeccccccccccccccceEEEEeeccCceEE- Confidence 432211 1111122332211111 11111111111 123333333332222 22233466666542 22222 Q ss_pred CcccceEEEEcceecCC---CCcccccceeE Q lcl|Aclame:pro 714 GLPITAEFETLDINING---QETLLDKKQVI 741 (823) Q Consensus 714 gl~~~~~~~~l~~~~~~---~~~~~~~~~~i 741 (823) +-+.++ .+||..+-+ .|.-.-|.||| T Consensus 764 -v~i~~d-~P~P~tvlai~~eg~y~~r~~~v 792 (792) T protein:vir:94 764 -VRIISE-HTTPLNVIGCGWEGNYLRRSSGI 792 (792) T ss_pred -EEEEEC-CCCCEEEEEEEEEEEEeccccCC Confidence 233333 556665432 35566677777 No 38 >protein:vir:8837 Length: 513 # NCBI annotation: constituent protein # Family: family:all:4957 # MgeID: mge:158 # MgeName: PaP3 # Cross-refs: genbank:acc:NP_775245;genbank:gi:27476043;genbank:GeneID:2700591 Probab=96.82 E-value=0.00032 Score=39.75 Aligned_cols=454 Identities=11% Similarity=0.035 Sum_probs=141.9 Q ss_pred cccccccc--ccceEEEcccccceecceeeeeeeeee--eeEEeccceeeeEecc--cceeecccccCceEEEEeceecc Q lcl|Aclame:pro 185 ASIFGAEQ--VGKLFYLEQPAVDSVPVWETSKSTSIG--DIRRADSNYYRAVTAG--KTGTLRPSHTEGTSWDGWGGSGD 258 (823) Q Consensus 185 ~~~~~a~~--vg~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~--~t~~~~~~~~~~~~~~~~~~~~~ 258 (823) .+...... ....+.-..+..-...+|+........ ...+..+......+-+ -.+...-. ..+.......+... T Consensus 1 ~~~~~~~~~~~~g~~~d~~p~~lp~~a~s~~~N~~~~~~~~~~~~g~~pv~a~~~~~~~g~~~~~-~~g~~~~~~~~~~~ 79 (513) T protein:vir:88 1 MALERQEVKNPTGIVTDIAPADLPLDKWSFGNNVRFKNGKAQKALGHSPIFDTAQAPILDMFPFI-RNNIPYWLLCSEKR 79 (513) T ss_pred CCcCChhhcccccceeccChhhcCCCcceeeeeeeEecceeeecCccceeeecCCCCceeeeeee-cCCCeEEEEeeceE Confidence 11111111 111111111111111222222111111 1111111111000000 00000000 11111111111100 Q ss_pred cc--ceEEEEEEe------cCccEEEEEEecCccccccEEEEeeccccccccCcceecc--cCcccCCCCcc-----EEE Q lcl|Aclame:pro 259 DD--TGIEWEYLH------SGFGIARITAVNGTTATAEVISYIPSQVVGEDNASYKWAK--YAWNSVNGYPG-----TVV 323 (823) Q Consensus 259 ~~--~~~~~~~~~------~~~g~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~--~~w~~~~g~Ps-----~v~ 323 (823) .. ....+..+. ...-.|..+.+.+.... .+...+-..|.. ..+.+-.|+|+ .|. T Consensus 80 ~~~~~~~t~~dvs~~~~~~~~~~~w~~~~f~~~i~a-----------~ng~~~~q~~~~~s~~f~dl~g~p~~~~a~~i~ 148 (513) T protein:vir:88 80 LYLADGTTIIDVSPGPYSASVTNRWSVGSFNGVIFA-----------NDGVNPPHHLPPTESVFRVLPNFPANTTFRRLK 148 (513) T ss_pred EEEecCceeeeccccceeecccCceeeeeecCEEEE-----------EcCCCcceEEcCCCceeeeccCCCcccceEEEE Confidence 00 000000000 00011221211111100 001111111221 12334445665 478 Q ss_pred EEeceEEEEeCc----CCCcEEEEEcccCccc----ccccccCCCCCcEEEEEcCCCceEEEEEeec-CcEEEEecCcEE Q lcl|Aclame:pro 324 YYQQRLYFAAST----AFPQTIWASRTGDYKD----FGKSNPTQDDDRIIYTYAGRQVNEIRHLIDV-GSLVALTSGGEY 394 (823) Q Consensus 324 f~q~RL~f~~~~----~~p~~V~~Sr~gdy~n----F~~~t~~~DdD~I~~~~~~~~~~~i~~~v~~-~~Ll~~t~~~q~ 394 (823) +|++||++++.. +.||.|+.|..+|... |..+....+.+=.++ .+....|...++. ..|+||+.++.| T Consensus 149 v~~~flv~~~~t~~~~~~PnrV~wS~~~D~~~~P~~W~~t~~t~~a~~~~l---~d~~g~~v~g~~~g~~liif~e~~i~ 225 (513) T protein:vir:88 149 SFKNFLIGLNVTSNSIEMPQMVWWSTSADAGGVPASWDPTDPTKDAGQNTL---ADTNGAIVDGVKLRDSFIIYKEDSVY 225 (513) T ss_pred EEeeEEEEeecccCcCCCCceEEEecccCCcccccccccccccCccccccc---CCCccceeeeeecccceEEEecccEE Confidence 999999997753 4699999999999644 432222222222222 2233445556666 479999999999 Q ss_pred EEecCCCccccccceEEEEee-cccCccc-ccEEeCCeEEEEecCCCEEEEEEeeccccceeecc-hHH-HHHHhcCCC- Q lcl|Aclame:pro 395 VITGDQNKVLTPSSFAFSSQG-SNGSSNV-PPIAVANIALFVQEKGSVVRDLAYSFDVDGYQGND-LTI-LANHLFQKH- 469 (823) Q Consensus 395 ~l~~~~~~~lTP~~~~i~~~s-~~g~~~~-~Pv~vg~~v~f~~~~g~~v~e~~~~~~~d~~~~~d-lt~-~~~hl~~~~- 469 (823) .++..++ |....+++.. ..||... .=+.+|+.++|+++.| ++.+ +..+-...+.+ +-. +...+-..+ T Consensus 226 ~m~y~g~----~~if~~~~i~~~~G~~~p~SI~~~~~~~ffls~~G--f~~~--~G~~~~~Ig~ekVdk~f~~~~n~~~~ 297 (513) T protein:vir:88 226 SMRYIGG----LYIFQFQQLFNDVGILGPNCAIEFDGNHFVVGHGD--VYVH--NGVQKQSVIDAQVRKFFFSDINPDNY 297 (513) T ss_pred EEEecCC----CceEEEEeecccccccCCceeEEECCeEEEEeCCc--eEEe--cCceeeecccchhhhhhhccCCcccc Confidence 9973222 3346776665 5788653 3466899999999987 5533 22211111111 111 111111111 Q ss_pred ceEEEEEcCCCcEEEEEEeCC--------CeEEEEEEeccccceeEEeeccCCceEEEEEEecCCCCEEEEEEEecCCCc Q lcl|Aclame:pro 470 SIVDWCFSIVPYSSAFCIRDD--------GKLLVMTYLRDQQVFAWAPQSSTGKYESTCSISEGNEDAVYFVVNRTVNGQ 541 (823) Q Consensus 470 ~~~~~a~~~~p~~~~~~~~~d--------g~l~~~ty~~~q~v~aW~~w~~~g~~~~~~~~~~~~~d~l~~~v~r~~~g~ 541 (823) ..+..+.......+.|+...- .++++|-|.. ..|+..+.+..+-.+...+ +.+.........+. T Consensus 298 ~~~~~~~d~~~~~v~~~y~s~~~~~~~~~~~~lVYd~~~----~~Ws~~~~p~~~~g~~g~~----~~~~~~~~~~~~~~ 369 (513) T protein:vir:88 298 QRTFVLADHVNTEMWVCYSSTRSEPGKHCDRAIIWNWKE----NTWSIRDLPNVLSGAYGII----DPKTSNLWDDDSNP 369 (513) T ss_pred eEEEEEEcCcccEEEEEecCCCCCCCcccceEEEEEccC----CeEEEEeccchhhcccccc----cccccceecccccc Confidence 123344444444555554331 1345554433 3466555443321111111 01111111111111 Q ss_pred EEEE------------EEeeccccCCcccceeEeeeeeEEeccccceeeeEeeccccCcCccCcceEEecCCeEEccccc Q lcl|Aclame:pro 542 TVRY------------IERLSSRLFTSDEDAFFVDSGLSYDGRNTSDRTMTITGGSGEWDYLAEYTISVSGGAYFTSSDV 609 (823) Q Consensus 542 ~~~~------------~e~~~~~~~~~~~~~~~lD~~~~y~~~~~~~~~~~~~~~~~~l~~~~~~~v~~~dg~~~~~~~v 609 (823) +-.+ .+.++-..+ ...+-.+.|-..+++|.+.+..... ..+....+..+..-+ .+.+.... T Consensus 370 ~d~~~~~~~~~~~~~~~~sl~~~~~-~~~~~~~fd~~~~f~G~~lea~~~t-----~~~~~~~~~~~~~i~-~v~~~~t~ 442 (513) T protein:vir:88 370 WDTDTSVWGEGSYNPAKSSMIFTSF-QDAKLFLFGETSTFSGQSFTSTLER-----SDIYLGDDRMMKTVS-AVIPHITG 442 (513) T ss_pred cccchhhhhccccccccceeEeeec-cCCceeeecccccccCCceEEEEEe-----cCccccCchhheeee-eeeeeeec Confidence 0000 000000000 0011111222222333322221110 000000111110000 00000001 Q ss_pred ccEEEecccCceeEeeeEEE--EEEEEeeE-EecCCCceeeEecceeeeeeeeeeeecccccceeeecccccccceEEEE Q lcl|Aclame:pro 610 GAQLQFPYTGADPDTGYEVS--KELRCDII-SVTSNTAVVVRANRNVPPSLRNVATTNWQMARRTFGGLSHLEGQTVNIL 686 (823) Q Consensus 610 gg~i~l~~~~~~~~vG~~~~--~~~~~~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~~g~~~~~~~gl~~l~g~~v~v~ 686 (823) .|..++. +|.... ..+..+.. .+.....+....++.-+....++- .+ -+.-+|+.|-++.+. T Consensus 443 ~g~~t~~-------vg~~~~~~~~~~~s~~~~~~~~~~~~~~~r~~gRy~~~ri~-----i~---~~~~w~~~G~~ve~~ 507 (513) T protein:vir:88 443 NGVCNIW-------VGNAQVQGSGIRWKGPYPYRIGQDYKIDTKHVGRYIALKFD-----FA---SAGDWYFNGYTLEMA 507 (513) T ss_pred ceEEEEE-------EeeeccCccccccccceeeecccCceEEeccCCceEEEEEE-----cc---CCCceEEeeEEEEEe Confidence 1222111 111000 00011100 001011111111111011000100 00 022334445555444 Q ss_pred eC-Cce Q lcl|Aclame:pro 687 SD-ANV 691 (823) Q Consensus 687 ~d-g~~ 691 (823) +. |.= T Consensus 508 ~~~g~R 513 (513) T protein:vir:88 508 PKAGMR 513 (513) T ss_pred cCCCCC Confidence 32 221 No 39 >protein:vir:107423 Length: 681 # NCBI annotation: Bbp13 # Family: family:all:780 # MgeID: mge:1537 # MgeName: BPP-1 # Cross-refs: genbank:acc:NP_958682;genbank:gi:41179374;genbank:GeneID:2717217 Probab=96.46 E-value=0.0006 Score=38.25 Aligned_cols=601 Identities=11% Similarity=0.064 Sum_probs=166.4 Q ss_pred CceeeeecccccccccccccccchHHHHHHHHhhhhc---ceeeecCCceecCcceeeeeecCCCCCceEEEEEECCCCe Q lcl|Aclame:pro 1 MAISWIQPSFAGGEIGPSLYGRIDMAKYQVALRKCDN---FIVRQYGGVENRPGTRFVGAAKYPNRKCRLIPFQFSTVQT 77 (823) Q Consensus 1 M~~~~~q~sF~~GElsP~l~~r~Dl~ry~~q~~~~~N---~~~~~~GGl~rRPGt~fva~~~~~~~~~rLipF~~~~~~~ 77 (823) |.--++ .-.|| +..|.=+... ..++.-.. ++|-... .+-.|+-+.. +++.|++ .++. T Consensus 36 ~~N~~~--~~~G~-----~~~R~g~~~~-~~~~~~~~~~rlipf~~~-----~~~~~~l~~g--~~~~r~~-----~~~~ 95 (681) T protein:vir:10 36 CRNFVV--KPQGP-----AENRAGFAFV-REVKDSAKKVRLIPFTYS-----VTQTMVIELG--AGYFRFH-----TNGG 95 (681) T ss_pred hcCcEE--EecCC-----ceecChhHhh-hhcCCCCCcEEEEEEEeC-----CCceEEEEEe--CCeEEEE-----eCCc Confidence 221111 11233 3333322211 11110000 0110000 1111222221 1222221 0111 Q ss_pred EEEEEeCCe-EEE---EECC---ce-EeeccccceEEeccccccccceeEEE-----EeCcEEEEEeCCceEEEEEEcC- Q lcl|Aclame:pro 78 YALEFGHQY-MRV---IKDG---AL-VLNSSNVIYEIATPYTEADLFRIKFT-----QSADVLTLVHPAYPPKELRRYA- 143 (823) Q Consensus 78 Y~l~fg~~~-irV---~~~~---g~-v~~t~~~~~~~~tPyt~~~l~~L~~~-----qsaD~~fIvn~~~~p~~l~r~~- 143 (823) +++. ++. ..+ |... .. -.+++.+.+ +.+|-. +...|.-. +...+.|..-+. .|..+.... T Consensus 96 ~~~~--~~~~~~~~tpy~~~~l~~l~~~q~aD~~~-i~h~~~--~p~~L~r~~~~~W~l~~~~f~~~p~-~p~~~~at~~ 169 (681) T protein:vir:10 96 TLLD--GAVPYEIANPYAEADLFNIHYVQSADVLT-LVHPNY--APRELRRLGATNWQLATIAFTSPVA-TPTSVTATSN 169 (681) T ss_pred EEee--CcEeEEecCCCChhhhcCceEEEEcCEEE-EECCCC--cceEEEEccCCceEEEEEEeccccc-cceeeeeecc Confidence 1110 000 000 0000 00 001111111 111100 00111100 001111111111 111111111 Q ss_pred --CCCceeeeEEEeccc--cccccccceEEEEecccCCceeeeccccccccccccceEEEcccccceecceeeeeeeeee Q lcl|Aclame:pro 144 --HDNWQLVDVVTKNGP--FEDINIDESLTVYASASTGTITLTASASIFGAEQVGKLFYLEQPAVDSVPVWETSKSTSIG 219 (823) Q Consensus 144 --~~~ws~~~~~f~~~p--~~~i~~~~s~t~t~~a~t~~~Tvtas~~~~~a~~vg~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (823) .+.-+.....+.... ..........+.+........ .....+.+.+.+..+++.+...... .+. .... T Consensus 170 ~~~~~~t~~~~v~avda~t~~~s~~~~~~tvt~~~~~~~~---~~t~~w~a~~g~~~~~V~~~~~gi~-g~i----g~~~ 241 (681) T protein:vir:10 170 NKGTDYTYRYVVTALDAEGKTESAPSSAGTCTNNLFTNGG---ANTIAWSASSGASRYNVYKEQGGLY-GYI----GQTT 241 (681) T ss_pred CCccceeEeEEEEEeecccceeecCCcceEEeeeeecCCc---ceeEEEEecCCceeeeecccceeEE-EEe----eccc Confidence 111111111110000 000000000111100000000 0011122223333333322211100 000 0000 Q ss_pred eeEEeccceeeeEecccceeecccccCceEEEEeceeccccceEEEEEEecCccEEEEEEecCccccccEEEEeeccccc Q lcl|Aclame:pro 220 DIRRADSNYYRAVTAGKTGTLRPSHTEGTSWDGWGGSGDDDTGIEWEYLHSGFGIARITAVNGTTATAEVISYIPSQVVG 299 (823) Q Consensus 220 ~~~~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~~~~~~~~~~~~~~~~~~~ 299 (823) .....+.+.. ..... .+ ......|....+....-.....+....+...-.++..-+.+.. ...+-+..... T Consensus 242 ~~~~~~~~~~----~~~~~--t~-~~~~~~~~~~~gyP~~v~f~q~RL~f~~~~~~p~~v~~Srsgd--y~nF~~~~~~~ 312 (681) T protein:vir:10 242 GTSLVDDNIA----PDLSV--TP-PIYDAVFNAAGDYPAAVSYFEQRRCFAGTTNKPQNIWMTRSGT--ESAMSYSLPVR 312 (681) T ss_pred eeeeeecccc----cCccc--cc-cccccccccCCCceEEEEEEcceEEEeeCCCCCcEEEEEcccC--cccccccCCCC Confidence 0000000000 00000 00 0000111111111111111111111111000000001111111 11111111111 Q ss_pred cccCcceecccCcccCCCCccEEEEEeceEEEEeCcCCCcEEEEEcc-cCcccccccccCCCCCcEEEEEcC-CCceEEE Q lcl|Aclame:pro 300 EDNASYKWAKYAWNSVNGYPGTVVYYQQRLYFAASTAFPQTIWASRT-GDYKDFGKSNPTQDDDRIIYTYAG-RQVNEIR 377 (823) Q Consensus 300 ~~~~t~~~~~~~w~~~~g~Ps~v~f~q~RL~f~~~~~~p~~V~~Sr~-gdy~nF~~~t~~~DdD~I~~~~~~-~~~~~i~ 377 (823) ++ .-.+. ..=++...-.+.+.=++ +|.++...+ +. .+|.. ++- +.+++ |.+...+ -..+.++ T Consensus 313 dd-D~i~~--~~~~~~~~~i~~~v~~~-~lli~t~~~--e~-~l~~~~~~~--lTP~~-------~~~~~~s~~g~~~~~ 376 (681) T protein:vir:10 313 DD-DRVAF--RVAAREANAIRHIVPLT-ELLLLTSSG--EW-RVASVNSDA--VTPTT-------ISVRPQSYVGATDVQ 376 (681) T ss_pred CC-ccEEE--EEcCCcceeEEEEEecC-cEEEEEcCc--EE-EEecCCCcc--cccee-------EEEEEeeeecccccc Confidence 11 11111 11011111223333344 454444432 11 22211 111 22221 1111111 1112222 Q ss_pred EEeecCcEEEEecCc----EEEEecCCCccccccceEE--EEeec-ccCcccccEEeCCeEEEEecCCCEEEEEEeeccc Q lcl|Aclame:pro 378 HLIDVGSLVALTSGG----EYVITGDQNKVLTPSSFAF--SSQGS-NGSSNVPPIAVANIALFVQEKGSVVRDLAYSFDV 450 (823) Q Consensus 378 ~~v~~~~Ll~~t~~~----q~~l~~~~~~~lTP~~~~i--~~~s~-~g~~~~~Pv~vg~~v~f~~~~g~~v~e~~~~~~~ 450 (823) =+.-.+.++....++ |+..+-.+ +.......++ ...-. ++.....-....+.++++.+....+.-+.|..+ T Consensus 377 Pv~vg~~v~fv~~~g~~vre~~y~~~~-d~~~~~dlt~~a~Hl~~~~~i~~~a~~~~p~~~~~~v~~dg~l~~~ty~~e- 454 (681) T protein:vir:10 377 PVVVNNTTIYGAARGGHVRELAYNWQA-NGFVTGDLSLRAAHLFDNLDILDMAYAKAPQPIVWFISSSGKLLGLTYVPE- 454 (681) T ss_pred ceeeCCeEEEEecCCCEEEEEEEeeec-CceeccchhhhhhhhcCCCCeEEEEEecCCCEEEEEEecCCcEEEEEEecc- Confidence 222233444444444 33333211 1111111111 11111 111111112234556655554445666766543 Q ss_pred cceeecchHHHHHHhcCCCceEEEEEc-CCCcEEEEEE-eC--CCeE-EEEEEeccccceeEEeeccCCceEEEEEEecC Q lcl|Aclame:pro 451 DGYQGNDLTILANHLFQKHSIVDWCFS-IVPYSSAFCI-RD--DGKL-LVMTYLRDQQVFAWAPQSSTGKYESTCSISEG 525 (823) Q Consensus 451 d~~~~~dlt~~~~hl~~~~~~~~~a~~-~~p~~~~~~~-~~--dg~l-~~~ty~~~q~v~aW~~w~~~g~~~~~~~~~~~ 525 (823) +++.--+.|-+.|. +...|.- ......+|++ +. +|.- ..+-++.+++.. . T Consensus 455 -----q~v~aW~~~~~~g~-v~~v~~i~~~~~d~l~~vv~r~~~g~~~~yie~~~~~~~~-------------------~ 509 (681) T protein:vir:10 455 -----QQIGAWHQHDTDGV-FESCAVVAEGNEDRLYAVVRRTIGGNEVRYVERMASRQFD-------------------A 509 (681) T ss_pred -----cceeeEEEEecCCc-EEEEEEecCCCCcEEEEEEEecCCCCeEEEEEecCCcccc-------------------c Confidence 33334555555542 3333221 1112222222 11 1111 111111111100 0 Q ss_pred CCCEEEEEEEecCCCcEEEEEEeeccccCCcccceeEeeeeeEEeccccceeeeEeeccccCcCccCcceEEe-cCCeEE Q lcl|Aclame:pro 526 NEDAVYFVVNRTVNGQTVRYIERLSSRLFTSDEDAFFVDSGLSYDGRNTSDRTMTITGGSGEWDYLAEYTISV-SGGAYF 604 (823) Q Consensus 526 ~~d~l~~~v~r~~~g~~~~~~e~~~~~~~~~~~~~~~lD~~~~y~~~~~~~~~~~~~~~~~~l~~~~~~~v~~-~dg~~~ 604 (823) .+|.. ++ |.... .--+...+. .+|+|++|++|.+ +||.++ T Consensus 510 ~~~~~--------------~v---D~~~t------~~~~~~~~~----------------sgl~~leG~tv~i~aDG~~~ 550 (681) T protein:vir:10 510 QADAF--------------FV---DSGLT------YSGEPVSHI----------------SGLEHLEGKTVSILADGAVH 550 (681) T ss_pred cccce--------------Ee---ecccc------ccCcceeee----------------ccccCCCCcEEEEEeCCeec Confidence 00111 10 00000 000111111 1589999999987 999999 Q ss_pred ccccc-ccEEEecccCceeEeeeEEEEEEEEeeEEecCCCceeeEecceeeeeeeeeeeecccccceeeecccccccceE Q lcl|Aclame:pro 605 TSSDV-GAQLQFPYTGADPDTGYEVSKELRCDIISVTSNTAVVVRANRNVPPSLRNVATTNWQMARRTFGGLSHLEGQTV 683 (823) Q Consensus 605 ~~~~v-gg~i~l~~~~~~~~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~g~~~~~~~gl~~l~g~~v 683 (823) +..+| +|.|+|+.++++++||++|+++++++++++..+.+....+.+.+...-.++..+.....+..-..++.+--+ T Consensus 551 ~~~~V~~G~itl~~~~~~v~VGl~Y~s~i~~lp~~~~~~~g~~~g~~~ri~rv~lr~~~S~g~~~~~~~~~l~~~~~~-- 628 (681) T protein:vir:10 551 PQRVVTDGAIDLDVEAGTVHIGLPITAELQTLPVAMQLDGSFGQGRVKNINKLWLRVHRSSGIFAGPHADALTEVKQR-- 628 (681) T ss_pred CcEeecCcEEEeCcCCceEEEeeeceeEEEecceeeecCCcccCCceEEEEEEEEEEEcccceEEeeCCCceEEEEEe-- Confidence 88877 899999999999999999999999999998777654433333333333344444333333222223222111 Q ss_pred EEEeCCceeC-CEEEcCCEEEecCC---CcEEEE----CcccceEEEEcceecCCCC Q lcl|Aclame:pro 684 NILSDANVEP-QKVVSGGAVTLESP---GAVVHI----GLPITAEFETLDININGQE 732 (823) Q Consensus 684 ~v~~dg~~~~-~~~v~~g~itl~~~---~~~~~~----gl~~~~~~~~l~~~~~~~~ 732 (823) . +..++ +.....|.+.++.. +....+ --|++..|.-+-+|+.-.| T Consensus 629 ---~-~~~~g~~~~l~TG~~~v~v~~~~~~~~~v~I~qd~PlP~tvlsi~~ev~vgg 681 (681) T protein:vir:10 629 ---T-SEPYGSPPALKSEEIPLVLSPKWGDSGQLFVRQADPLPLMIVSMSAEIAIGA 681 (681) T ss_pred ---c-cccccccCCccCCeEEEEeCCCcCcceEEEEEECCCcCEEEEEeeEEEEeeC Confidence 1 11111 11223466655532 222222 1233333333333322111 No 40 >protein:vir:107802 Length: 681 # NCBI annotation: hypothetical protein predicted by GeneMark # Family: family:all:780 # MgeID: mge:1673 # MgeName: BIP-1 # Cross-refs: genbank:acc:NP_996623;genbank:gi:45580757;genbank:GeneID:2767878 Probab=96.46 E-value=0.0006 Score=38.25 Aligned_cols=601 Identities=11% Similarity=0.064 Sum_probs=166.4 Q ss_pred CceeeeecccccccccccccccchHHHHHHHHhhhhc---ceeeecCCceecCcceeeeeecCCCCCceEEEEEECCCCe Q lcl|Aclame:pro 1 MAISWIQPSFAGGEIGPSLYGRIDMAKYQVALRKCDN---FIVRQYGGVENRPGTRFVGAAKYPNRKCRLIPFQFSTVQT 77 (823) Q Consensus 1 M~~~~~q~sF~~GElsP~l~~r~Dl~ry~~q~~~~~N---~~~~~~GGl~rRPGt~fva~~~~~~~~~rLipF~~~~~~~ 77 (823) |.--++ .-.|| +..|.=+... ..++.-.. ++|-... .+-.|+-+.. +++.|++ .++. T Consensus 36 ~~N~~~--~~~G~-----~~~R~g~~~~-~~~~~~~~~~rlipf~~~-----~~~~~~l~~g--~~~~r~~-----~~~~ 95 (681) T protein:vir:10 36 CRNFVV--KPQGP-----AENRAGFAFV-REVKDSAKKVRLIPFTYS-----VTQTMVIELG--AGYFRFH-----TNGG 95 (681) T ss_pred hcCcEE--EecCC-----ceecChhHhh-hhcCCCCCcEEEEEEEeC-----CCceEEEEEe--CCeEEEE-----eCCc Confidence 221111 11233 3333322211 11110000 0110000 1111222221 1222221 0111 Q ss_pred EEEEEeCCe-EEE---EECC---ce-EeeccccceEEeccccccccceeEEE-----EeCcEEEEEeCCceEEEEEEcC- Q lcl|Aclame:pro 78 YALEFGHQY-MRV---IKDG---AL-VLNSSNVIYEIATPYTEADLFRIKFT-----QSADVLTLVHPAYPPKELRRYA- 143 (823) Q Consensus 78 Y~l~fg~~~-irV---~~~~---g~-v~~t~~~~~~~~tPyt~~~l~~L~~~-----qsaD~~fIvn~~~~p~~l~r~~- 143 (823) +++. ++. ..+ |... .. -.+++.+.+ +.+|-. +...|.-. +...+.|..-+. .|..+.... T Consensus 96 ~~~~--~~~~~~~~tpy~~~~l~~l~~~q~aD~~~-i~h~~~--~p~~L~r~~~~~W~l~~~~f~~~p~-~p~~~~at~~ 169 (681) T protein:vir:10 96 TLLD--GAVPYEIANPYAEADLFNIHYVQSADVLT-LVHPNY--APRELRRLGATNWQLATIAFTSPVA-TPTSVTATSN 169 (681) T ss_pred EEee--CcEeEEecCCCChhhhcCceEEEEcCEEE-EECCCC--cceEEEEccCCceEEEEEEeccccc-cceeeeeecc Confidence 1110 000 000 0000 00 001111111 111100 00111100 001111111111 111111111 Q ss_pred --CCCceeeeEEEeccc--cccccccceEEEEecccCCceeeeccccccccccccceEEEcccccceecceeeeeeeeee Q lcl|Aclame:pro 144 --HDNWQLVDVVTKNGP--FEDINIDESLTVYASASTGTITLTASASIFGAEQVGKLFYLEQPAVDSVPVWETSKSTSIG 219 (823) Q Consensus 144 --~~~ws~~~~~f~~~p--~~~i~~~~s~t~t~~a~t~~~Tvtas~~~~~a~~vg~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (823) .+.-+.....+.... ..........+.+........ .....+.+.+.+..+++.+...... .+. .... T Consensus 170 ~~~~~~t~~~~v~avda~t~~~s~~~~~~tvt~~~~~~~~---~~t~~w~a~~g~~~~~V~~~~~gi~-g~i----g~~~ 241 (681) T protein:vir:10 170 NKGTDYTYRYVVTALDAEGKTESAPSSAGTCTNNLFTNGG---ANTIAWSASSGASRYNVYKEQGGLY-GYI----GQTT 241 (681) T ss_pred CCccceeEeEEEEEeecccceeecCCcceEEeeeeecCCc---ceeEEEEecCCceeeeecccceeEE-EEe----eccc Confidence 111111111110000 000000000111100000000 0011122223333333322211100 000 0000 Q ss_pred eeEEeccceeeeEecccceeecccccCceEEEEeceeccccceEEEEEEecCccEEEEEEecCccccccEEEEeeccccc Q lcl|Aclame:pro 220 DIRRADSNYYRAVTAGKTGTLRPSHTEGTSWDGWGGSGDDDTGIEWEYLHSGFGIARITAVNGTTATAEVISYIPSQVVG 299 (823) Q Consensus 220 ~~~~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~~~~~~~~~~~~~~~~~~~ 299 (823) .....+.+.. ..... .+ ......|....+....-.....+....+...-.++..-+.+.. ...+-+..... T Consensus 242 ~~~~~~~~~~----~~~~~--t~-~~~~~~~~~~~gyP~~v~f~q~RL~f~~~~~~p~~v~~Srsgd--y~nF~~~~~~~ 312 (681) T protein:vir:10 242 GTSLVDDNIA----PDLSV--TP-PIYDAVFNAAGDYPAAVSYFEQRRCFAGTTNKPQNIWMTRSGT--ESAMSYSLPVR 312 (681) T ss_pred eeeeeecccc----cCccc--cc-cccccccccCCCceEEEEEEcceEEEeeCCCCCcEEEEEcccC--cccccccCCCC Confidence 0000000000 00000 00 0000111111111111111111111111000000001111111 11111111111 Q ss_pred cccCcceecccCcccCCCCccEEEEEeceEEEEeCcCCCcEEEEEcc-cCcccccccccCCCCCcEEEEEcC-CCceEEE Q lcl|Aclame:pro 300 EDNASYKWAKYAWNSVNGYPGTVVYYQQRLYFAASTAFPQTIWASRT-GDYKDFGKSNPTQDDDRIIYTYAG-RQVNEIR 377 (823) Q Consensus 300 ~~~~t~~~~~~~w~~~~g~Ps~v~f~q~RL~f~~~~~~p~~V~~Sr~-gdy~nF~~~t~~~DdD~I~~~~~~-~~~~~i~ 377 (823) ++ .-.+. ..=++...-.+.+.=++ +|.++...+ +. .+|.. ++- +.+++ |.+...+ -..+.++ T Consensus 313 dd-D~i~~--~~~~~~~~~i~~~v~~~-~lli~t~~~--e~-~l~~~~~~~--lTP~~-------~~~~~~s~~g~~~~~ 376 (681) T protein:vir:10 313 DD-DRVAF--RVAAREANAIRHIVPLT-ELLLLTSSG--EW-RVASVNSDA--VTPTT-------ISVRPQSYVGATDVQ 376 (681) T ss_pred CC-ccEEE--EEcCCcceeEEEEEecC-cEEEEEcCc--EE-EEecCCCcc--cccee-------EEEEEeeeecccccc Confidence 11 11111 11011111223333344 454444432 11 22211 111 22221 1111111 1112222 Q ss_pred EEeecCcEEEEecCc----EEEEecCCCccccccceEE--EEeec-ccCcccccEEeCCeEEEEecCCCEEEEEEeeccc Q lcl|Aclame:pro 378 HLIDVGSLVALTSGG----EYVITGDQNKVLTPSSFAF--SSQGS-NGSSNVPPIAVANIALFVQEKGSVVRDLAYSFDV 450 (823) Q Consensus 378 ~~v~~~~Ll~~t~~~----q~~l~~~~~~~lTP~~~~i--~~~s~-~g~~~~~Pv~vg~~v~f~~~~g~~v~e~~~~~~~ 450 (823) =+.-.+.++....++ |+..+-.+ +.......++ ...-. ++.....-....+.++++.+....+.-+.|..+ T Consensus 377 Pv~vg~~v~fv~~~g~~vre~~y~~~~-d~~~~~dlt~~a~Hl~~~~~i~~~a~~~~p~~~~~~v~~dg~l~~~ty~~e- 454 (681) T protein:vir:10 377 PVVVNNTTIYGAARGGHVRELAYNWQA-NGFVTGDLSLRAAHLFDNLDILDMAYAKAPQPIVWFISSSGKLLGLTYVPE- 454 (681) T ss_pred ceeeCCeEEEEecCCCEEEEEEEeeec-CceeccchhhhhhhhcCCCCeEEEEEecCCCEEEEEEecCCcEEEEEEecc- Confidence 222233444444444 33333211 1111111111 11111 111111112234556655554445666766543 Q ss_pred cceeecchHHHHHHhcCCCceEEEEEc-CCCcEEEEEE-eC--CCeE-EEEEEeccccceeEEeeccCCceEEEEEEecC Q lcl|Aclame:pro 451 DGYQGNDLTILANHLFQKHSIVDWCFS-IVPYSSAFCI-RD--DGKL-LVMTYLRDQQVFAWAPQSSTGKYESTCSISEG 525 (823) Q Consensus 451 d~~~~~dlt~~~~hl~~~~~~~~~a~~-~~p~~~~~~~-~~--dg~l-~~~ty~~~q~v~aW~~w~~~g~~~~~~~~~~~ 525 (823) +++.--+.|-+.|. +...|.- ......+|++ +. +|.- ..+-++.+++.. . T Consensus 455 -----q~v~aW~~~~~~g~-v~~v~~i~~~~~d~l~~vv~r~~~g~~~~yie~~~~~~~~-------------------~ 509 (681) T protein:vir:10 455 -----QQIGAWHQHDTDGV-FESCAVVAEGNEDRLYAVVRRTIGGNEVRYVERMASRQFD-------------------A 509 (681) T ss_pred -----cceeeEEEEecCCc-EEEEEEecCCCCcEEEEEEEecCCCCeEEEEEecCCcccc-------------------c Confidence 33334555555542 3333221 1112222222 11 1111 111111111100 0 Q ss_pred CCCEEEEEEEecCCCcEEEEEEeeccccCCcccceeEeeeeeEEeccccceeeeEeeccccCcCccCcceEEe-cCCeEE Q lcl|Aclame:pro 526 NEDAVYFVVNRTVNGQTVRYIERLSSRLFTSDEDAFFVDSGLSYDGRNTSDRTMTITGGSGEWDYLAEYTISV-SGGAYF 604 (823) Q Consensus 526 ~~d~l~~~v~r~~~g~~~~~~e~~~~~~~~~~~~~~~lD~~~~y~~~~~~~~~~~~~~~~~~l~~~~~~~v~~-~dg~~~ 604 (823) .+|.. ++ |.... .--+...+. .+|+|++|++|.+ +||.++ T Consensus 510 ~~~~~--------------~v---D~~~t------~~~~~~~~~----------------sgl~~leG~tv~i~aDG~~~ 550 (681) T protein:vir:10 510 QADAF--------------FV---DSGLT------YSGEPVSHI----------------SGLEHLEGKTVSILADGAVH 550 (681) T ss_pred cccce--------------Ee---ecccc------ccCcceeee----------------ccccCCCCcEEEEEeCCeec Confidence 00111 10 00000 000111111 1589999999987 999999 Q ss_pred ccccc-ccEEEecccCceeEeeeEEEEEEEEeeEEecCCCceeeEecceeeeeeeeeeeecccccceeeecccccccceE Q lcl|Aclame:pro 605 TSSDV-GAQLQFPYTGADPDTGYEVSKELRCDIISVTSNTAVVVRANRNVPPSLRNVATTNWQMARRTFGGLSHLEGQTV 683 (823) Q Consensus 605 ~~~~v-gg~i~l~~~~~~~~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~g~~~~~~~gl~~l~g~~v 683 (823) +..+| +|.|+|+.++++++||++|+++++++++++..+.+....+.+.+...-.++..+.....+..-..++.+--+ T Consensus 551 ~~~~V~~G~itl~~~~~~v~VGl~Y~s~i~~lp~~~~~~~g~~~g~~~ri~rv~lr~~~S~g~~~~~~~~~l~~~~~~-- 628 (681) T protein:vir:10 551 PQRVVTDGAIDLDVEAGTVHIGLPITAELQTLPVAMQLDGSFGQGRVKNINKLWLRVHRSSGIFAGPHADALTEVKQR-- 628 (681) T ss_pred CcEeecCcEEEeCcCCceEEEeeeceeEEEecceeeecCCcccCCceEEEEEEEEEEEcccceEEeeCCCceEEEEEe-- Confidence 88877 899999999999999999999999999998777654433333333333344444333333222223222111 Q ss_pred EEEeCCceeC-CEEEcCCEEEecCC---CcEEEE----CcccceEEEEcceecCCCC Q lcl|Aclame:pro 684 NILSDANVEP-QKVVSGGAVTLESP---GAVVHI----GLPITAEFETLDININGQE 732 (823) Q Consensus 684 ~v~~dg~~~~-~~~v~~g~itl~~~---~~~~~~----gl~~~~~~~~l~~~~~~~~ 732 (823) . +..++ +.....|.+.++.. +....+ --|++..|.-+-+|+.-.| T Consensus 629 ---~-~~~~g~~~~l~TG~~~v~v~~~~~~~~~v~I~qd~PlP~tvlsi~~ev~vgg 681 (681) T protein:vir:10 629 ---T-SEPYGSPPALKSEEIPLVLSPKWGDSGQLFVRQADPLPLMIVSMSAEIAIGA 681 (681) T ss_pred ---c-cccccccCCccCCeEEEEeCCCcCcceEEEEEECCCcCEEEEEeeEEEEeeC Confidence 1 11111 11223466655532 222222 1233333333333322111 No 41 >protein:vir:98487 Length: 681 # NCBI annotation: hypothetical protein predicted by GeneMark # Family: family:all:780 # MgeID: mge:1592 # MgeName: BMP-1 # Cross-refs: genbank:acc:NP_996575;genbank:gi:45569506;genbank:GeneID:2767815 Probab=96.46 E-value=0.0006 Score=38.25 Aligned_cols=601 Identities=11% Similarity=0.064 Sum_probs=166.4 Q ss_pred CceeeeecccccccccccccccchHHHHHHHHhhhhc---ceeeecCCceecCcceeeeeecCCCCCceEEEEEECCCCe Q lcl|Aclame:pro 1 MAISWIQPSFAGGEIGPSLYGRIDMAKYQVALRKCDN---FIVRQYGGVENRPGTRFVGAAKYPNRKCRLIPFQFSTVQT 77 (823) Q Consensus 1 M~~~~~q~sF~~GElsP~l~~r~Dl~ry~~q~~~~~N---~~~~~~GGl~rRPGt~fva~~~~~~~~~rLipF~~~~~~~ 77 (823) |.--++ .-.|| +..|.=+... ..++.-.. ++|-... .+-.|+-+.. +++.|++ .++. T Consensus 36 ~~N~~~--~~~G~-----~~~R~g~~~~-~~~~~~~~~~rlipf~~~-----~~~~~~l~~g--~~~~r~~-----~~~~ 95 (681) T protein:vir:98 36 CRNFVV--KPQGP-----AENRAGFAFV-REVKDSAKKVRLIPFTYS-----VTQTMVIELG--AGYFRFH-----TNGG 95 (681) T ss_pred hcCcEE--EecCC-----ceecChhHhh-hhcCCCCCcEEEEEEEeC-----CCceEEEEEe--CCeEEEE-----eCCc Confidence 221111 11233 3333322211 11110000 0110000 1111222221 1222221 0111 Q ss_pred EEEEEeCCe-EEE---EECC---ce-EeeccccceEEeccccccccceeEEE-----EeCcEEEEEeCCceEEEEEEcC- Q lcl|Aclame:pro 78 YALEFGHQY-MRV---IKDG---AL-VLNSSNVIYEIATPYTEADLFRIKFT-----QSADVLTLVHPAYPPKELRRYA- 143 (823) Q Consensus 78 Y~l~fg~~~-irV---~~~~---g~-v~~t~~~~~~~~tPyt~~~l~~L~~~-----qsaD~~fIvn~~~~p~~l~r~~- 143 (823) +++. ++. ..+ |... .. -.+++.+.+ +.+|-. +...|.-. +...+.|..-+. .|..+.... T Consensus 96 ~~~~--~~~~~~~~tpy~~~~l~~l~~~q~aD~~~-i~h~~~--~p~~L~r~~~~~W~l~~~~f~~~p~-~p~~~~at~~ 169 (681) T protein:vir:98 96 TLLD--GAVPYEIANPYAEADLFNIHYVQSADVLT-LVHPNY--APRELRRLGATNWQLATIAFTSPVA-TPTSVTATSN 169 (681) T ss_pred EEee--CcEeEEecCCCChhhhcCceEEEEcCEEE-EECCCC--cceEEEEccCCceEEEEEEeccccc-cceeeeeecc Confidence 1110 000 000 0000 00 001111111 111100 00111100 001111111111 111111111 Q ss_pred --CCCceeeeEEEeccc--cccccccceEEEEecccCCceeeeccccccccccccceEEEcccccceecceeeeeeeeee Q lcl|Aclame:pro 144 --HDNWQLVDVVTKNGP--FEDINIDESLTVYASASTGTITLTASASIFGAEQVGKLFYLEQPAVDSVPVWETSKSTSIG 219 (823) Q Consensus 144 --~~~ws~~~~~f~~~p--~~~i~~~~s~t~t~~a~t~~~Tvtas~~~~~a~~vg~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (823) .+.-+.....+.... ..........+.+........ .....+.+.+.+..+++.+...... .+. .... T Consensus 170 ~~~~~~t~~~~v~avda~t~~~s~~~~~~tvt~~~~~~~~---~~t~~w~a~~g~~~~~V~~~~~gi~-g~i----g~~~ 241 (681) T protein:vir:98 170 NKGTDYTYRYVVTALDAEGKTESAPSSAGTCTNNLFTNGG---ANTIAWSASSGASRYNVYKEQGGLY-GYI----GQTT 241 (681) T ss_pred CCccceeEeEEEEEeecccceeecCCcceEEeeeeecCCc---ceeEEEEecCCceeeeecccceeEE-EEe----eccc Confidence 111111111110000 000000000111100000000 0011122223333333322211100 000 0000 Q ss_pred eeEEeccceeeeEecccceeecccccCceEEEEeceeccccceEEEEEEecCccEEEEEEecCccccccEEEEeeccccc Q lcl|Aclame:pro 220 DIRRADSNYYRAVTAGKTGTLRPSHTEGTSWDGWGGSGDDDTGIEWEYLHSGFGIARITAVNGTTATAEVISYIPSQVVG 299 (823) Q Consensus 220 ~~~~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~~~~~~~~~~~~~~~~~~~ 299 (823) .....+.+.. ..... .+ ......|....+....-.....+....+...-.++..-+.+.. ...+-+..... T Consensus 242 ~~~~~~~~~~----~~~~~--t~-~~~~~~~~~~~gyP~~v~f~q~RL~f~~~~~~p~~v~~Srsgd--y~nF~~~~~~~ 312 (681) T protein:vir:98 242 GTSLVDDNIA----PDLSV--TP-PIYDAVFNAAGDYPAAVSYFEQRRCFAGTTNKPQNIWMTRSGT--ESAMSYSLPVR 312 (681) T ss_pred eeeeeecccc----cCccc--cc-cccccccccCCCceEEEEEEcceEEEeeCCCCCcEEEEEcccC--cccccccCCCC Confidence 0000000000 00000 00 0000111111111111111111111111000000001111111 11111111111 Q ss_pred cccCcceecccCcccCCCCccEEEEEeceEEEEeCcCCCcEEEEEcc-cCcccccccccCCCCCcEEEEEcC-CCceEEE Q lcl|Aclame:pro 300 EDNASYKWAKYAWNSVNGYPGTVVYYQQRLYFAASTAFPQTIWASRT-GDYKDFGKSNPTQDDDRIIYTYAG-RQVNEIR 377 (823) Q Consensus 300 ~~~~t~~~~~~~w~~~~g~Ps~v~f~q~RL~f~~~~~~p~~V~~Sr~-gdy~nF~~~t~~~DdD~I~~~~~~-~~~~~i~ 377 (823) ++ .-.+. ..=++...-.+.+.=++ +|.++...+ +. .+|.. ++- +.+++ |.+...+ -..+.++ T Consensus 313 dd-D~i~~--~~~~~~~~~i~~~v~~~-~lli~t~~~--e~-~l~~~~~~~--lTP~~-------~~~~~~s~~g~~~~~ 376 (681) T protein:vir:98 313 DD-DRVAF--RVAAREANAIRHIVPLT-ELLLLTSSG--EW-RVASVNSDA--VTPTT-------ISVRPQSYVGATDVQ 376 (681) T ss_pred CC-ccEEE--EEcCCcceeEEEEEecC-cEEEEEcCc--EE-EEecCCCcc--cccee-------EEEEEeeeecccccc Confidence 11 11111 11011111223333344 454444432 11 22211 111 22221 1111111 1112222 Q ss_pred EEeecCcEEEEecCc----EEEEecCCCccccccceEE--EEeec-ccCcccccEEeCCeEEEEecCCCEEEEEEeeccc Q lcl|Aclame:pro 378 HLIDVGSLVALTSGG----EYVITGDQNKVLTPSSFAF--SSQGS-NGSSNVPPIAVANIALFVQEKGSVVRDLAYSFDV 450 (823) Q Consensus 378 ~~v~~~~Ll~~t~~~----q~~l~~~~~~~lTP~~~~i--~~~s~-~g~~~~~Pv~vg~~v~f~~~~g~~v~e~~~~~~~ 450 (823) =+.-.+.++....++ |+..+-.+ +.......++ ...-. ++.....-....+.++++.+....+.-+.|..+ T Consensus 377 Pv~vg~~v~fv~~~g~~vre~~y~~~~-d~~~~~dlt~~a~Hl~~~~~i~~~a~~~~p~~~~~~v~~dg~l~~~ty~~e- 454 (681) T protein:vir:98 377 PVVVNNTTIYGAARGGHVRELAYNWQA-NGFVTGDLSLRAAHLFDNLDILDMAYAKAPQPIVWFISSSGKLLGLTYVPE- 454 (681) T ss_pred ceeeCCeEEEEecCCCEEEEEEEeeec-CceeccchhhhhhhhcCCCCeEEEEEecCCCEEEEEEecCCcEEEEEEecc- Confidence 222233444444444 33333211 1111111111 11111 111111112234556655554445666766543 Q ss_pred cceeecchHHHHHHhcCCCceEEEEEc-CCCcEEEEEE-eC--CCeE-EEEEEeccccceeEEeeccCCceEEEEEEecC Q lcl|Aclame:pro 451 DGYQGNDLTILANHLFQKHSIVDWCFS-IVPYSSAFCI-RD--DGKL-LVMTYLRDQQVFAWAPQSSTGKYESTCSISEG 525 (823) Q Consensus 451 d~~~~~dlt~~~~hl~~~~~~~~~a~~-~~p~~~~~~~-~~--dg~l-~~~ty~~~q~v~aW~~w~~~g~~~~~~~~~~~ 525 (823) +++.--+.|-+.|. +...|.- ......+|++ +. +|.- ..+-++.+++.. . T Consensus 455 -----q~v~aW~~~~~~g~-v~~v~~i~~~~~d~l~~vv~r~~~g~~~~yie~~~~~~~~-------------------~ 509 (681) T protein:vir:98 455 -----QQIGAWHQHDTDGV-FESCAVVAEGNEDRLYAVVRRTIGGNEVRYVERMASRQFD-------------------A 509 (681) T ss_pred -----cceeeEEEEecCCc-EEEEEEecCCCCcEEEEEEEecCCCCeEEEEEecCCcccc-------------------c Confidence 33334555555542 3333221 1112222222 11 1111 111111111100 0 Q ss_pred CCCEEEEEEEecCCCcEEEEEEeeccccCCcccceeEeeeeeEEeccccceeeeEeeccccCcCccCcceEEe-cCCeEE Q lcl|Aclame:pro 526 NEDAVYFVVNRTVNGQTVRYIERLSSRLFTSDEDAFFVDSGLSYDGRNTSDRTMTITGGSGEWDYLAEYTISV-SGGAYF 604 (823) Q Consensus 526 ~~d~l~~~v~r~~~g~~~~~~e~~~~~~~~~~~~~~~lD~~~~y~~~~~~~~~~~~~~~~~~l~~~~~~~v~~-~dg~~~ 604 (823) .+|.. ++ |.... .--+...+. .+|+|++|++|.+ +||.++ T Consensus 510 ~~~~~--------------~v---D~~~t------~~~~~~~~~----------------sgl~~leG~tv~i~aDG~~~ 550 (681) T protein:vir:98 510 QADAF--------------FV---DSGLT------YSGEPVSHI----------------SGLEHLEGKTVSILADGAVH 550 (681) T ss_pred cccce--------------Ee---ecccc------ccCcceeee----------------ccccCCCCcEEEEEeCCeec Confidence 00111 10 00000 000111111 1589999999987 999999 Q ss_pred ccccc-ccEEEecccCceeEeeeEEEEEEEEeeEEecCCCceeeEecceeeeeeeeeeeecccccceeeecccccccceE Q lcl|Aclame:pro 605 TSSDV-GAQLQFPYTGADPDTGYEVSKELRCDIISVTSNTAVVVRANRNVPPSLRNVATTNWQMARRTFGGLSHLEGQTV 683 (823) Q Consensus 605 ~~~~v-gg~i~l~~~~~~~~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~g~~~~~~~gl~~l~g~~v 683 (823) +..+| +|.|+|+.++++++||++|+++++++++++..+.+....+.+.+...-.++..+.....+..-..++.+--+ T Consensus 551 ~~~~V~~G~itl~~~~~~v~VGl~Y~s~i~~lp~~~~~~~g~~~g~~~ri~rv~lr~~~S~g~~~~~~~~~l~~~~~~-- 628 (681) T protein:vir:98 551 PQRVVTDGAIDLDVEAGTVHIGLPITAELQTLPVAMQLDGSFGQGRVKNINKLWLRVHRSSGIFAGPHADALTEVKQR-- 628 (681) T ss_pred CcEeecCcEEEeCcCCceEEEeeeceeEEEecceeeecCCcccCCceEEEEEEEEEEEcccceEEeeCCCceEEEEEe-- Confidence 88877 899999999999999999999999999998777654433333333333344444333333222223222111 Q ss_pred EEEeCCceeC-CEEEcCCEEEecCC---CcEEEE----CcccceEEEEcceecCCCC Q lcl|Aclame:pro 684 NILSDANVEP-QKVVSGGAVTLESP---GAVVHI----GLPITAEFETLDININGQE 732 (823) Q Consensus 684 ~v~~dg~~~~-~~~v~~g~itl~~~---~~~~~~----gl~~~~~~~~l~~~~~~~~ 732 (823) . +..++ +.....|.+.++.. +....+ --|++..|.-+-+|+.-.| T Consensus 629 ---~-~~~~g~~~~l~TG~~~v~v~~~~~~~~~v~I~qd~PlP~tvlsi~~ev~vgg 681 (681) T protein:vir:98 629 ---T-SEPYGSPPALKSEEIPLVLSPKWGDSGQLFVRQADPLPLMIVSMSAEIAIGA 681 (681) T ss_pred ---c-cccccccCCccCCeEEEEeCCCcCcceEEEEEECCCcCEEEEEeeEEEEeeC Confidence 1 11111 11223466655532 222222 1233333333333322111 No 42 >protein:vir:103790 Length: 768 # NCBI annotation: hypothetical protein # Family: family:all:780 # MgeID: mge:1645 # MgeName: BcepC6B # Cross-refs: genbank:acc:YP_024932;genbank:gi:48697202;genbank:GeneID:2846114 Probab=95.16 E-value=0.0026 Score=34.72 Aligned_cols=614 Identities=10% Similarity=0.069 Sum_probs=167.9 Q ss_pred CceeeeecccccccccccccccchHHHHHHHHhhhhcceeeecCCceecCcceeeeeecCCCCCceEEEEEECCCCeEEE Q lcl|Aclame:pro 1 MAISWIQPSFAGGEIGPSLYGRIDMAKYQVALRKCDNFIVRQYGGVENRPGTRFVGAAKYPNRKCRLIPFQFSTVQTYAL 80 (823) Q Consensus 1 M~~~~~q~sF~~GElsP~l~~r~Dl~ry~~q~~~~~N~~~~~~GGl~rRPGt~fva~~~~~~~~~rLipF~~~~~~~Y~l 80 (823) =...-+...+..+.|. ....|.|| ||......+ ++.++.- |+ +.+....+.+ -+|-++.+.....+-+ T Consensus 101 ~~~~e~~tp~~~~~l~-~~~~~~~L-~~~q~aD~~--~i~~~~~-----~p-~~l~r~~~~~--w~l~~~~~~~gp~~~~ 168 (768) T protein:vir:10 101 GAPVEIATPYALADLT-TEDGTFAI-RATQSADTM--YLFHGGY-----PT-QKLLRTSATT--FSLQPVTFVGGPFAAV 168 (768) T ss_pred CeeEEEEcCCCcceee-ccccccee-EEEeecCEE--EEEcCCc-----ce-eEEEEecCCC--ceeEEeeecCcccccc Confidence 0011112222222110 00111121 111111100 1111111 11 1122222211 2222323222211110 Q ss_pred EEeCCeEEEEECCceEeeccccceEEeccccccccceeEEEEeCcEEEEEeCCceEEEEE-----EcCCCCceeeeEE-- Q lcl|Aclame:pro 81 EFGHQYMRVIKDGALVLNSSNVIYEIATPYTEADLFRIKFTQSADVLTLVHPAYPPKELR-----RYAHDNWQLVDVV-- 153 (823) Q Consensus 81 ~fg~~~irV~~~~g~v~~t~~~~~~~~tPyt~~~l~~L~~~qsaD~~fIvn~~~~p~~l~-----r~~~~~ws~~~~~-- 153 (823) . .+..+++...++. +... +..++| ++++++..+.+. ......|...... T Consensus 169 n-~~~~vti~~s~~~-----~~~T---------------~tasa~---~~~~~~v~~~~~l~~~~~~~~~~~~~~~~~g~ 224 (768) T protein:vir:10 169 N-SDNNVRVHASAGT-----GAVT---------------LVASAS---VFRPSDVGTLFYLEQEDNSFVKPWVVHQKIGP 224 (768) T ss_pred c-cceeEEEEecccc-----eeEE---------------EeecCC---ccchhhcceeeeeeeeccccccccEEEEeeee Confidence 0 1122222222111 0000 000111 011111111111 1111223221110 Q ss_pred --E-ecccccccc-------ccceEEEEecccCCcee---eeccccccccccccceEEEcccccceecceeee-eeeeee Q lcl|Aclame:pro 154 --T-KNGPFEDIN-------IDESLTVYASASTGTIT---LTASASIFGAEQVGKLFYLEQPAVDSVPVWETS-KSTSIG 219 (823) Q Consensus 154 --f-~~~p~~~i~-------~~~s~t~t~~a~t~~~T---vtas~~~~~a~~vg~~~~~~~~~~~~~~~~~~~-~~~~~~ 219 (823) . ......... ...+.+..+....+... .+.....+...+.+...+......... .|... ....+. T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~i~~~~~~t~~~ 303 (768) T protein:vir:10 225 SELRRVGDRVYLCTAVGTATPQVTGTETPTHTSGSRWDGTGQDESATDEYGSIGAEWEYQHSGYGTV-LITGYTNDQVVT 303 (768) T ss_pred EEEEecCCceEEeeeeccccccccceeccccccCceEEEecCcccccccccccceEEEEEEcCCceE-EEEEecCCeeEE Confidence 0 000000000 00000111111111111 111111222223332222211110000 00000 000000 Q ss_pred eeEEe-ccceeeeEecccceeeccccc-CceEEEEeceeccccceEEEEEEecCccEEEEEEecCccccccEEEEeeccc Q lcl|Aclame:pro 220 DIRRA-DSNYYRAVTAGKTGTLRPSHT-EGTSWDGWGGSGDDDTGIEWEYLHSGFGIARITAVNGTTATAEVISYIPSQV 297 (823) Q Consensus 220 ~~~~~-~~~~~~~~~~~~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~~~~~~~~~~~~~~~~~ 297 (823) ...+. +.... ............+.. ....|....+..........+....+ +..- .-+.+. +...+.+... T Consensus 304 ~~~~~~~~~~~-~~~~~~~~~~~~t~~~~~~~~~~~~g~Ps~v~f~q~RL~f~~-~~~v---~~Srtg--d~~nF~~~s~ 376 (768) T protein:vir:10 304 GTVATNDPADP-GMLPNTVVTLTGTYKWARSLFNSTDGFPQMGTFWRNRLCLMR-DRWL---AMSVSA--DFETFKTKDA 376 (768) T ss_pred eeeeeecCccc-ccccccccccCCCcccccCCCcCCCCCceEEEEEeeeEEEee-CCEE---EEEccc--cccccccccc Confidence 00000 00000 000000000000000 00011111111111111111211111 1111 111111 1111111111 Q ss_pred cc-cccCcceecccCcccCCCCccEEEEEeceEEEEeCcCCCcEEEEEcccCcccccccccCCCCCcEEEEEcCC-CceE Q lcl|Aclame:pro 298 VG-EDNASYKWAKYAWNSVNGYPGTVVYYQQRLYFAASTAFPQTIWASRTGDYKDFGKSNPTQDDDRIIYTYAGR-QVNE 375 (823) Q Consensus 298 ~~-~~~~t~~~~~~~w~~~~g~Ps~v~f~q~RL~f~~~~~~p~~V~~Sr~gdy~nF~~~t~~~DdD~I~~~~~~~-~~~~ 375 (823) .. .+....+.. .=++...-.+.+.=++ +|++..... |.+.-+.+++ .=+.+++ |.+...+. ..+. T Consensus 377 ~~~~DdD~I~~~--~ss~~~~~i~~~v~~~-~L~i~T~~~--q~~l~~~~~~-~~lTP~~-------~~i~~~s~~g~~~ 443 (768) T protein:vir:10 377 DQQTDDSAIVQQ--LNARQLNKLAWMVESD-SLLIGMTGD--EWVIGPANAS-QPVSAAN-------LNAARRTSYGSKR 443 (768) T ss_pred ccccCCccEEEE--ecCCcceeEEEEeecC-cEEEEecCc--eEEEecCCCC-cccccce-------EEEEEeehhcccc Confidence 00 001111110 0011111112233344 566655433 2222222211 0022221 11111110 0111 Q ss_pred EEEEeecCcEEEEecCc----EEEEecCCCccccccceE--EEEeecc---cCccccc---EEeCCeEEEEecCCCEEEE Q lcl|Aclame:pro 376 IRHLIDVGSLVALTSGG----EYVITGDQNKVLTPSSFA--FSSQGSN---GSSNVPP---IAVANIALFVQEKGSVVRD 443 (823) Q Consensus 376 i~~~v~~~~Ll~~t~~~----q~~l~~~~~~~lTP~~~~--i~~~s~~---g~~~~~P---v~vg~~v~f~~~~g~~v~e 443 (823) ++=+.-.+.++....++ ||..+.. ++......++ +.....+ .++++.- ....+.++|+-+.-..+.. T Consensus 444 ~~Pv~vG~~v~fv~~~g~~vre~~y~~~-~d~y~a~DlT~~a~hl~~~~~~~~~~i~~~a~~~~p~~v~~~v~~dg~l~~ 522 (768) T protein:vir:10 444 IQPVQVGGTIMFVQKAGRKLRDFKYDFS-SDNYVSTDVTKIADHITRGRAGTNSGIMSLCFQQEPHSVVWAARADGQLIG 522 (768) T ss_pred cccEEeCCeEEEEcCCCCEEEEEEeeee-cCceecchhhhhhhhhccccCccccceeeEEEeecCCeEEEEEecCCeEEE Confidence 11111122233233332 1222211 1111111111 1111111 0111111 1234566666555556777 Q ss_pred EEeeccccceeecchHHHHHHhcCCCceEEEEEcCC----CcEEEEEEeC--CCeEEE-EEEeccccceeEEeeccCCce Q lcl|Aclame:pro 444 LAYSFDVDGYQGNDLTILANHLFQKHSIVDWCFSIV----PYSSAFCIRD--DGKLLV-MTYLRDQQVFAWAPQSSTGKY 516 (823) Q Consensus 444 ~~~~~~~d~~~~~dlt~~~~hl~~~~~~~~~a~~~~----p~~~~~~~~~--dg~l~~-~ty~~~q~v~aW~~w~~~g~~ 516 (823) |.|..+.+. +++.--+.|-+.+..+...|.-.. .+.+.++++. +|.... ..++.++ |. .+- T Consensus 523 ~ty~~e~~~---q~v~aW~~~~~~~g~v~~v~~i~~~~g~~d~l~~~v~r~~~g~~~~~ie~l~~~----~~---~~~-- 590 (768) T protein:vir:10 523 CTYDEEAGR---SDVYGWHRHPDANGFVECVASMPAPDGASDDLWVIVRRQVNGQTVRYVEYLNPA----LQ---DDE-- 590 (768) T ss_pred EEEecCCCc---eeEEeEEEEEcCCCEEEEEEEEecCCCCccEEEEEEEecCCCeEEEEEEecCcc----cc---ccc-- Confidence 777755321 223334445333322333322111 1222222222 121111 1111111 00 000 Q ss_pred EEEEEEecCCCCEEEEEEEecCCCcEEEEEEeeccccCCcccceeEeeeeeEEeccccceeeeEeeccccCcCccCcceE Q lcl|Aclame:pro 517 ESTCSISEGNEDAVYFVVNRTVNGQTVRYIERLSSRLFTSDEDAFFVDSGLSYDGRNTSDRTMTITGGSGEWDYLAEYTI 596 (823) Q Consensus 517 ~~~~~~~~~~~d~l~~~v~r~~~g~~~~~~e~~~~~~~~~~~~~~~lD~~~~y~~~~~~~~~~~~~~~~~~l~~~~~~~v 596 (823) ..++.+ ++...-. . .+.. ..+ . .+++|++|++| T Consensus 591 --------~~~~~~--------------~~D~~~~-~----~~~~------~~~---~-----------~gl~~leg~~v 623 (768) T protein:vir:10 591 --------PQSSAF--------------YVDAGIT-Y----NGVP------TST---I-----------AGLGHLEGVTV 623 (768) T ss_pred --------ccccce--------------Eeccccc-c----CCcc------eee---e-----------cCCCCcccceE Confidence 000111 1110000 0 0000 011 0 15889999999 Q ss_pred Ee-cCCeEEccccc-ccEEEecccCceeEeeeEEEEEEEEeeEEecCCCceeeEecceeeeeeeeeeeecccccceeee- Q lcl|Aclame:pro 597 SV-SGGAYFTSSDV-GAQLQFPYTGADPDTGYEVSKELRCDIISVTSNTAVVVRANRNVPPSLRNVATTNWQMARRTFG- 673 (823) Q Consensus 597 ~~-~dg~~~~~~~v-gg~i~l~~~~~~~~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~g~~~~~~~- 673 (823) .+ +||.+++...+ +|.|++++++++++||++|+++++++++++..+++.....++.+.....++..+.....+.... T Consensus 624 ~v~~dG~~~~~~~v~~g~itl~~~~~~v~vG~~y~s~~~~~p~~~~~~~gs~~~~~~ri~r~~v~~~~S~~~~~~~~~~~ 703 (768) T protein:vir:10 624 AVLTDGAVHPSRTVTAGAITLDWSASIVHIGVPTTCRIQTMQLNAGAANGTAQGKTKRVTNIATRFSRSLGGVVGPTFDD 703 (768) T ss_pred EEEECCEeccCceecCCEEEeCCCCceEEEeEeeeEEEEecceEeecCCccccccceEEEEEEEEEecccceEEEecCCC Confidence 87 99998877655 8999999999999999999999999999987766544433333333344444443332222111 Q ss_pred -cccccccceEEEEeCCceeCCEEEcCCEEEecCCC---cEEEECcccceEEEEcceecCC---CCcccccc Q lcl|Aclame:pro 674 -GLSHLEGQTVNILSDANVEPQKVVSGGAVTLESPG---AVVHIGLPITAEFETLDINING---QETLLDKK 738 (823) Q Consensus 674 -gl~~l~g~~v~v~~dg~~~~~~~v~~g~itl~~~~---~~~~~gl~~~~~~~~l~~~~~~---~~~~~~~~ 738 (823) +++.+..|...-.++.. .....|.+.++... ..+.+ -+.++ .+||+.+-+ ......|+ T Consensus 704 ~~~~~~~~r~~~~~~~~~----~~l~TG~~~v~~~~~~~~~~~i--~i~~d-~P~P~tvlsi~~~~~~nd~~ 768 (768) T protein:vir:10 704 NDLEQLSFRKPSNAMDRA----VPLFDGDMESDWRGGYEGQSWI--CYQND-QPLPVTLLGFFPILDTQDDR 768 (768) T ss_pred CCceeeeeEecCcccCcc----CCcccCEEEEEecCCCCcceEE--EEEEC-CCCCEEEEEEEEEEEEeecC Confidence 24444333322112211 11124565555321 11222 11122 334433321 11121222 No 43 >protein:vir:97014 Length: 800 # NCBI annotation: 33 # Family: family:all:825 # MgeID: mge:1644 # MgeName: K1-5 # Cross-refs: genbank:acc:YP_654134;genbank:gi:108862018;genbank:GeneID:5075963 Probab=95.02 E-value=0.0029 Score=34.46 Aligned_cols=642 Identities=10% Similarity=0.037 Sum_probs=181.6 Q ss_pred Cceee-----eecccccccccccc----cccchHHHHHHHHhhhhcceeeecCCceecCcceeeeeecCCCCCceEEEEE Q lcl|Aclame:pro 1 MAISW-----IQPSFAGGEIGPSL----YGRIDMAKYQVALRKCDNFIVRQYGGVENRPGTRFVGAAKYPNRKCRLIPFQ 71 (823) Q Consensus 1 M~~~~-----~q~sF~~GElsP~l----~~r~Dl~ry~~q~~~~~N~~~~~~GGl~rRPGt~fva~~~~~~~~~rLipF~ 71 (823) |++.- +..+...+-+ |-| ..+.|| ||-+....+ |+.++.-..++++- ... .....-|+... T Consensus 85 ~rv~~~~G~~~~v~~~~~~~-~y~~~~~~~~~~l-~~~tvaD~~--fi~n~~~~~~~~~~-----~~~-~~~~~~~~~v~ 154 (800) T protein:vir:97 85 PEIFDKYGRKCNVTSQDAPM-TYLSEVVNPREDV-QFMTIADVT--FMLNRRKVVKASSR-----KSP-KVGNKAIVFCA 154 (800) T ss_pred EEEEecCCcEEEEecCCcce-EEEeccCCCccce-eEEEEcCEE--EEeeCceecccccc-----ccc-CCCcceEEEEe Confidence 33321 1112221111 111 123343 111111110 11221111111110 000 01111222111 Q ss_pred ECCCC-eEEEEEeC-CeEEEEECCceEeeccccceEEeccccccccce----------eEEEEeCcEEEEEeCCceEEEE Q lcl|Aclame:pro 72 FSTVQ-TYALEFGH-QYMRVIKDGALVLNSSNVIYEIATPYTEADLFR----------IKFTQSADVLTLVHPAYPPKEL 139 (823) Q Consensus 72 ~~~~~-~Y~l~fg~-~~irV~~~~g~v~~t~~~~~~~~tPyt~~~l~~----------L~~~qsaD~~fIvn~~~~p~~l 139 (823) -...+ .|-+.+.. ....+...++. .+.....+.+.|-+.++.. ..+.+.+.+++| T Consensus 155 ~g~y~~~y~i~I~~~~~~~~~t~~~t---~~~~~~~~~~~~ia~ql~~~~~~~~~~~~~t~~~~G~~~~i---------- 221 (800) T protein:vir:97 155 YGQYGTSYSIVINGANAASFKTPDGG---SADHVEQIRTERITSELYSKLQQWSGVSDYEIQRDGTSIFI---------- 221 (800) T ss_pred ecccceeeeeccCCcceEEEEEcCCC---CcccceeccHHHHHHHHHHhhhccccccceEEEeCCcEEEE---------- Confidence 11111 23222211 11111111110 1111122222232222221 122222233333 Q ss_pred EEcCCCCceeeeEEEeccccccccc-cce-EEEEec-ccCC-ceeeeccccccccccccceEEEcccccceecceeeeee Q lcl|Aclame:pro 140 RRYAHDNWQLVDVVTKNGPFEDINI-DES-LTVYAS-ASTG-TITLTASASIFGAEQVGKLFYLEQPAVDSVPVWETSKS 215 (823) Q Consensus 140 ~r~~~~~ws~~~~~f~~~p~~~i~~-~~s-~t~t~~-a~t~-~~Tvtas~~~~~a~~vg~~~~~~~~~~~~~~~~~~~~~ 215 (823) .+.+..+|.+..-....+.....+. ... +...+. ...+ ...++.+....... ...+.... ......|..... T Consensus 222 ~~~~~~~~~v~t~~g~~~~~~~~~~~~v~~~~~lp~~~~~g~~v~i~~~~~~~~~~---y~~~~~~~-~~~~~~w~e~~~ 297 (800) T protein:vir:97 222 ERRDGASFTITTTDGAKGKDLVAIKNKVSSTDLLPSRAPAGYKVQVWPTGSKPESR---YWLQAEPK-EGNLVSWKETIA 297 (800) T ss_pred EEcCCceEEEEecCCcCceeeeEEeeeccchhhchhhCCCCcEEEEEccCCCCCce---EEEEEEec-ccCcceEEEeec Confidence 2222223322110000000000000 000 000000 0000 00111110000000 00000000 000111221111 Q ss_pred eeeeeeEEecc-ceeeeEec------ccceeecccccC------ce-----EEEEeceeccc---cceEEEEEEecCccE Q lcl|Aclame:pro 216 TSIGDIRRADS-NYYRAVTA------GKTGTLRPSHTE------GT-----SWDGWGGSGDD---DTGIEWEYLHSGFGI 274 (823) Q Consensus 216 ~~~~~~~~~~~-~~~~~~~~------~~t~~~~~~~~~------~~-----~~~~~~~~~~~---~~~~~~~~~~~~~g~ 274 (823) ... ....+. ........ ..+.++.+.... .. .+... +.... -.....+........ T Consensus 298 ~~~--~~~~~~~tmp~~~~~~~~~~~~g~~~~~~~~w~~r~~gd~~tnp~p~f~~~-~~~~~~~~v~f~q~RL~f~~~~~ 374 (800) T protein:vir:97 298 ADV--LLGFDKGTMPYIIERTDIINGIAQFKIRQGDWEDRKVGDDLTNPMPSFIDE-EVPQTIGGMFMVQNRLCFTAGEA 374 (800) T ss_pred ccc--ccceecccceEEEEEeecccccceeEEEeccccccccCccccCccccccCC-cCCCCceeEEEEeeeEEEecCCe Confidence 100 000000 00000000 000000000000 00 00000 00000 000111111111000 Q ss_pred EEEEEecCccccccEEEEeeccccc-cccCcceecccCcccCCCCccEEEEEeceEEEEeCcCCCcEEEEEcccCccccc Q lcl|Aclame:pro 275 ARITAVNGTTATAEVISYIPSQVVG-EDNASYKWAKYAWNSVNGYPGTVVYYQQRLYFAASTAFPQTIWASRTGDYKDFG 353 (823) Q Consensus 275 ~~~t~~~~~~~~~~~~~~~~~~~~~-~~~~t~~~~~~~w~~~~g~Ps~v~f~q~RL~f~~~~~~p~~V~~Sr~gdy~nF~ 353 (823) - .-+.+. +...+.+..... .++.-.+. ..=++.-.-...+..++.-|++..... + ..+|.. + =+. T Consensus 375 -v---~~Srtg--d~~nF~~~t~~~~~DdD~I~~--~~ss~~v~~i~~~v~~~~~L~i~T~~~--q-~~ls~~-~--~lT 440 (800) T protein:vir:97 375 -V---IASRTS--YFFDFFRYTVISALATDPFDI--FSDASEVYQLKHAVTLDGATVLFSDKS--Q-FILPGD-K--PLE 440 (800) T ss_pred -E---EEEecC--CccccccccccCCCCCccEEE--EecCCcceeeeEEeecCCcEEEEecCc--E-EEEeCC-C--ccc Confidence 0 001111 111111111100 00110111 000111111233334544455444332 1 223321 1 122 Q ss_pred ccccCCCCCcEEEEEcCCCceEEEEEeecCcEEEEecCcEE----EEecC-CCccccccceEEEEeec--ccCc--cccc Q lcl|Aclame:pro 354 KSNPTQDDDRIIYTYAGRQVNEIRHLIDVGSLVALTSGGEY----VITGD-QNKVLTPSSFAFSSQGS--NGSS--NVPP 424 (823) Q Consensus 354 ~~t~~~DdD~I~~~~~~~~~~~i~~~v~~~~Ll~~t~~~q~----~l~~~-~~~~lTP~~~~i~~~s~--~g~~--~~~P 424 (823) +++. .|.....-.-.+.++=+.-.+.++.....+.| -+..+ .++.... ..+..... +... ...- T Consensus 441 P~~~-----~~~~~s~~~~~~~~~Pv~vG~~v~fv~~~g~~s~vre~~~~~~~d~~~a--~DlT~~~~hl~~~~v~~~~~ 513 (800) T protein:vir:97 441 KSNA-----LLKPVTTFEVNNKVKPVVTGESVMFATNDGSYSGVREFYTDSYSDTKKA--QAITSHVNKLIEGNITNMAA 513 (800) T ss_pred ceeE-----EEEEEEeeeccCCCCcEEeCCeEEEeeCCCCeeEEEEEeeeecccceeh--hhHHHHHHHhcCCceEEEEE Confidence 2211 01111110111122222223455555555543 12211 1122211 11111111 1100 0000 Q ss_pred EE-eCCeEEEEecCCCEEEEEEeeccccceeecchHHHHHHhcCCC-ceEEEEEcCCCcEEEEEEeCCCeEEEEEEeccc Q lcl|Aclame:pro 425 IA-VANIALFVQEKGSVVRDLAYSFDVDGYQGNDLTILANHLFQKH-SIVDWCFSIVPYSSAFCIRDDGKLLVMTYLRDQ 502 (823) Q Consensus 425 v~-vg~~v~f~~~~g~~v~e~~~~~~~d~~~~~dlt~~~~hl~~~~-~~~~~a~~~~p~~~~~~~~~dg~l~~~ty~~~q 502 (823) .. -...++++.+....|.-+.|-..... +++..-+.|-+.+. .+..+++. .+.+.++++..+..|.-....++ T Consensus 514 ~~~~~~~v~~~~~~~~~l~~~~y~~~~~e---~~~~aW~~~~~~~~~~~~~~~~~--~d~l~~vv~r~~~~~ler~~~~~ 588 (800) T protein:vir:97 514 STNVNRLLVTTDKYRNIIYCYDWLWQGTD---RVQSAWHVWKWPIGTKVRGMFYS--GELLYLLLERGDGVYLEKMDMGD 588 (800) T ss_pred eCCCCeEEEEEEcCCCEEEEEEEeecCCc---eEEEeEEEEecCCCeEEEEEEEc--CCeEEEEEEcCCcEEEEEEeccc Confidence 01 12234566666677766666432211 11122233333322 22222322 23333333333433332221111 Q ss_pred cceeEEeeccCCceEEEEEEecCCCCEEEEEEEecCCCcEEEEEEeeccccCCcccceeEeeeeeEEeccccceeeeEee Q lcl|Aclame:pro 503 QVFAWAPQSSTGKYESTCSISEGNEDAVYFVVNRTVNGQTVRYIERLSSRLFTSDEDAFFVDSGLSYDGRNTSDRTMTIT 582 (823) Q Consensus 503 ~v~aW~~w~~~g~~~~~~~~~~~~~d~l~~~v~r~~~g~~~~~~e~~~~~~~~~~~~~~~lD~~~~y~~~~~~~~~~~~~ 582 (823) ... .+.++.+++=.+ ...+.-.. .....++||+++|...+..... . T Consensus 589 ~~~------------------~~~~~~~~lD~~------~~~~~~~~-------~~~~~~v~~~~~~~~~~~~~~~---~ 634 (800) T protein:vir:97 589 ALT------------------YGLNDRIRMDRQ------AELVFKHF-------KAEDEWVSEPLPWVPTNPELLD---C 634 (800) T ss_pred CcC------------------cccccceecccc------ceeeeeee-------ecccceEeccccccCCCcceeE---E Confidence 110 000111111000 00011111 1123578999888655443221 1 Q ss_pred ccccCcCccCcceEEecCCeEEcc-cccccEEEecccCceeEeeeEEEEEEEEeeEEecCCCceeeEecce-eeeeeeee Q lcl|Aclame:pro 583 GGSGEWDYLAEYTISVSGGAYFTS-SDVGAQLQFPYTGADPDTGYEVSKELRCDIISVTSNTAVVVRANRN-VPPSLRNV 660 (823) Q Consensus 583 ~~~~~l~~~~~~~v~~~dg~~~~~-~~vgg~i~l~~~~~~~~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~-v~~~~~~~ 660 (823) ....+|.|++|++|.+.++..... .+..+.+.+++++++++||++|+++++++++.+..+.+......|. +.....+. T Consensus 635 ~~v~g~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~vGl~Y~~~~~~~p~~i~~~~g~~~~~~r~~i~r~~~~~ 714 (800) T protein:vir:97 635 ILIEGWDSYIGGSFLFKYNPSDNTLSTTFDMYDDSHVKAKVIVGQIYPQEFEPTPVVIRDNQDRVSYIDVPVVGLVHLNL 714 (800) T ss_pred EEecccccccCceEEEEecCccCcccccceEEeCCCCCcEEEEeeeeeEEEEecceEEEecCCCceeecceEEEEEEEee Confidence 222478999999987755443333 3346788999999999999999999999999887654433332221 11111111 Q ss_pred eeecccccceeeeccc-----c--cccceE--EEEeCCceeCCEEEcCCEEEecCC--CcEEEECcccceEEEEcceecC Q lcl|Aclame:pro 661 ATTNWQMARRTFGGLS-----H--LEGQTV--NILSDANVEPQKVVSGGAVTLESP--GAVVHIGLPITAEFETLDININ 729 (823) Q Consensus 661 ~~~~~g~~~~~~~gl~-----~--l~g~~v--~v~~dg~~~~~~~v~~g~itl~~~--~~~~~~gl~~~~~~~~l~~~~~ 729 (823) ..+ .+.. -.+.... + ..|+.. .-+.+|. ..+..|.+++|-. +....+ -+.++ .+||+.+- T Consensus 715 ~~s-g~~~-~~v~~~~~~~~~~~~~~~~~~g~~~~~~g~----~~~~tg~~~vp~~g~~~~~~v--~i~~d-~PlP~tvl 785 (800) T protein:vir:97 715 DMY-PDFS-VEVKNVKSGKVRRVLASNRIGGALNNTVGY----VEPREGVFRFPLRAKSTDVVY--RIIVE-SPHTFQLR 785 (800) T ss_pred ccc-ccEE-EEEccccCCceeeeecCccccccccccCCc----cccccceEEEEeecccceeEE--EEEEC-CCCcEEEE Confidence 111 1110 0111110 0 011111 0111121 1233466666542 333332 33444 66666653 Q ss_pred C---CCcccccceeE Q lcl|Aclame:pro 730 G---QETLLDKKQVI 741 (823) Q Consensus 730 ~---~~~~~~~~~~i 741 (823) + .|.-.-|.||| T Consensus 786 si~~eg~y~~r~~rv 800 (800) T protein:vir:97 786 DIEWEGSYNPTKRRV 800 (800) T ss_pred EEEEEEEeecccccC Confidence 2 46666777887 No 44 >protein:vir:10452 Length: 794 # NCBI annotation: tail protein # Family: family:all:825 # MgeID: mge:184 # MgeName: phiA1122 # Cross-refs: genbank:acc:NP_848299;genbank:gi:30387490;genbank:GeneID:1733952 Probab=93.87 E-value=0.0061 Score=32.72 Aligned_cols=620 Identities=11% Similarity=0.064 Sum_probs=169.9 Q ss_pred CceeeeecccccccccccccccchHH--HHHHHHhhhhcceeeecCCceecC-cce--eeeeecCCCCCceEE-EEEECC Q lcl|Aclame:pro 1 MAISWIQPSFAGGEIGPSLYGRIDMA--KYQVALRKCDNFIVRQYGGVENRP-GTR--FVGAAKYPNRKCRLI-PFQFST 74 (823) Q Consensus 1 M~~~~~q~sF~~GElsP~l~~r~Dl~--ry~~q~~~~~N~~~~~~GGl~rRP-Gt~--fva~~~~~~~~~rLi-pF~~~~ 74 (823) |+.+...++.+...+.|.=.+-+++. .|....+--+|..... ..+-| |+. +..+....--..+|. .+.. . T Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~v~~g~y~r~y~i~i~~~~~a---t~~tpdgt~~~~~~~~s~~~ia~~L~~~l~a-~ 207 (794) T protein:vir:10 132 VVVQKDPNSVNLANYNPKQDGLINIRGGQYGRELIVHINGKDVA---TYKIPDGSKPEHVNNTDAQWLAERLAKQMRI-N 207 (794) T ss_pred eeeeeeccccccCCCCCCccEEEEecccccceEEEeccCCccee---EEEecCCCCcccceecchhhhhhhhhhhhhc-c Confidence 22222122222222222111111110 0000000000000000 00000 000 000000000000000 0000 0 Q ss_pred CCeEEEEEeCCeEEEEECCceEeeccccceEEeccccccccceeEEEEeCcEEEEEeCCceEEEEEEcCCCCceeeeEEE Q lcl|Aclame:pro 75 VQTYALEFGHQYMRVIKDGALVLNSSNVIYEIATPYTEADLFRIKFTQSADVLTLVHPAYPPKELRRYAHDNWQLVDVVT 154 (823) Q Consensus 75 ~~~Y~l~fg~~~irV~~~~g~v~~t~~~~~~~~tPyt~~~l~~L~~~qsaD~~fIvn~~~~p~~l~r~~~~~ws~~~~~f 154 (823) ...+-+.-+.+++.|....+..+.+-.. ..-|.. ..+. .+.|....+.+|...+...+... +.- T Consensus 208 ~~g~t~~~~g~~i~i~a~s~~~~~t~s~----~~~~~~---~~~~--------~v~~~~~~~~~lp~~~~~G~~v~-i~~ 271 (794) T protein:vir:10 208 LSGWTVNVGQGFIHVTAPSGQQIDSFTT----KDGYAD---QLIN--------PVTHYAQSFSKLPPNAPNGYMVK-IVG 271 (794) T ss_pred cCCceEEeCCeEEEEEeccCceeccccc----cCCcCc---ceeE--------EEEeccCcceecccCCCCCcEEE-EEe Confidence 0012222223333333322221110000 000000 0000 00111111111111111110000 000 Q ss_pred eccccccccccceEEEEecccCCceeeecccccccccccc-ceEEEcccccceecceeeeeeeeeeeeEEeccceeeeEe Q lcl|Aclame:pro 155 KNGPFEDINIDESLTVYASASTGTITLTASASIFGAEQVG-KLFYLEQPAVDSVPVWETSKSTSIGDIRRADSNYYRAVT 233 (823) Q Consensus 155 ~~~p~~~i~~~~s~t~t~~a~t~~~Tvtas~~~~~a~~vg-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (823) .... . .+. ..+...+..+....++.......-... ....+.+.... + +.......... . T Consensus 272 ~~~~--~--~~~-yyv~~~~~~~~w~E~~~~g~~~~~~~~tmP~~l~r~~~~----------t----~~~~~~~w~~r-~ 331 (794) T protein:vir:10 272 DASK--S--ADQ-YYVRYDAERKVWTETLGWNTENQVLLETMPHALVRAADG----------N----FDFKWLEWSPK-S 331 (794) T ss_pred CCCC--C--cce-eEEEEEcCCcEEEEecccceeEEEecccceeEEEEeccc----------e----EEeeecccccc-c Confidence 0000 0 000 000000000000000000000000000 00000000000 0 00000000000 0 Q ss_pred cccceeecccccCceEEEEeceecccc-ceEEEEEEecCccEEEEEEecCccccccEEEEeecccc-ccccCcceecccC Q lcl|Aclame:pro 234 AGKTGTLRPSHTEGTSWDGWGGSGDDD-TGIEWEYLHSGFGIARITAVNGTTATAEVISYIPSQVV-GEDNASYKWAKYA 311 (823) Q Consensus 234 ~~~t~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~t~~~~~~~~~~~~~~~~~~~~-~~~~~t~~~~~~~ 311 (823) .|...+ +|-.+ + .+..... .....+......... +-+..+. ...+.+.... ..++...+. .. T Consensus 332 ~Gd~~t-np~ps----f---~g~~~~~v~f~q~RL~f~~~~~v-~~Srtgd-----~~nF~~~t~~~~~DdD~I~~--~~ 395 (794) T protein:vir:10 332 CGDVDT-NPWPS----F---VGSSINDVFFFRNRLGFLSGENI-ILSRTAK-----YFNFYPASIANLSNDDPIDV--AV 395 (794) T ss_pred cccccc-CccCc----c---cCCCccEEEEEcceEEEeeCCeE-EEEecCC-----cccccccccccCCCCccEEE--Ee Confidence 000000 00000 0 0000000 011111111111111 1111111 0011111100 001111111 00 Q ss_pred cccCCCCccEEEEEeceEEEEeCcCCCcEEEEEcccCcccccccccCCCCCcEEEEEcCC-C-ceEEEEEeecCcEEEEe Q lcl|Aclame:pro 312 WNSVNGYPGTVVYYQQRLYFAASTAFPQTIWASRTGDYKDFGKSNPTQDDDRIIYTYAGR-Q-VNEIRHLIDVGSLVALT 389 (823) Q Consensus 312 w~~~~g~Ps~v~f~q~RL~f~~~~~~p~~V~~Sr~gdy~nF~~~t~~~DdD~I~~~~~~~-~-~~~i~~~v~~~~Ll~~t 389 (823) =++...-...+..++.-|++..... | ..+|.. + =+.+++ |.+...+. . .+.++=+.-.+.++... T Consensus 396 ss~~~~~i~~~v~~~~~L~i~T~~~--q-~~l~~~-~--~lTP~~-------~~~~~~s~~~~~~~~~Pv~vg~~v~f~~ 462 (794) T protein:vir:10 396 STNRIAILKYAVPFSEELLIWSDEA--Q-FVLTAS-G--TLTSRS-------VELNLTTQFDVQDRARPYGIGRNVYFAS 462 (794) T ss_pred cCCcceeeEEEeecCCcEEEEecCc--E-EEEeCC-C--ccccee-------EEEEEEEeecccCCCCceEeCCeEEEEe Confidence 0111111233444554455444332 2 333322 1 122222 11111111 1 11222222234455555 Q ss_pred cCcEE------EEecCCCccccccceEEEEeecc--cCcccccE-EeCCeEEEEecCCCEEEEEEeeccccceeecchHH Q lcl|Aclame:pro 390 SGGEY------VITGDQNKVLTPSSFAFSSQGSN--GSSNVPPI-AVANIALFVQEKGSVVRDLAYSFDVDGYQGNDLTI 460 (823) Q Consensus 390 ~~~q~------~l~~~~~~~lTP~~~~i~~~s~~--g~~~~~Pv-~vg~~v~f~~~~g~~v~e~~~~~~~d~~~~~dlt~ 460 (823) ..+.| ......++......+++...--+ +.-..--. .-...++++......+.-+.|-.... -+++.. T Consensus 463 ~~g~~~~~~r~~~~~~~~d~y~a~Dlt~~~~hl~~~~v~~~~~~~~~~~~~~~~~~~~~~l~~~~y~~~~~---e~~v~a 539 (794) T protein:vir:10 463 PRSSYTSIHRYYAVQDVSSVKNSEDITSHVPNYIPNGVFSICGSGTENFCSVLSHGDPSKIFMYKFLYLNE---ELRQQS 539 (794) T ss_pred cCCCeeEEEEEeeeccccCceehhhHHHHHHHhcCCceEEEEEeCCCCcEEEEEEcCCCEEEEEEEeecCC---ceEEEe Confidence 55533 11111112221111111000000 00000000 11223556666666776666542211 133344 Q ss_pred HHHHhcCCCceEEEEEcCCCcEEEEEEeCCCeEEEEEEeccccceeEEeeccCCceEEEEEEecCCCCEEEEEEEecCCC Q lcl|Aclame:pro 461 LANHLFQKHSIVDWCFSIVPYSSAFCIRDDGKLLVMTYLRDQQVFAWAPQSSTGKYESTCSISEGNEDAVYFVVNRTVNG 540 (823) Q Consensus 461 ~~~hl~~~~~~~~~a~~~~p~~~~~~~~~dg~l~~~ty~~~q~v~aW~~w~~~g~~~~~~~~~~~~~d~l~~~v~r~~~g 540 (823) -+.|-+.+. +..+|.....+.+.++++..+..+...|...+ ...++.+. . T Consensus 540 W~~~~~~g~-~~~~~~~~~~d~l~~iv~r~~~~~~~r~~~~~-----~~~~~~~~-----------~------------- 589 (794) T protein:vir:10 540 WSHWDFGEN-VQVLACQSISSDMYVILRNEFNTFLARISFTK-----NAIDLQGE-----------P------------- 589 (794) T ss_pred EEEEEcCCc-EEEEEEEecCCeEEEEEEeCCCEEEEEEEEee-----cCCCCCCc-----------c------------- Confidence 556666653 44444333334444444444444333332110 00111110 0 Q ss_pred cEEEEEEeeccccCCcccceeEeeeeeEEeccccceeeeEeeccccCcCccCcceEEe-cCCeEEccc----cccc--EE Q lcl|Aclame:pro 541 QTVRYIERLSSRLFTSDEDAFFVDSGLSYDGRNTSDRTMTITGGSGEWDYLAEYTISV-SGGAYFTSS----DVGA--QL 613 (823) Q Consensus 541 ~~~~~~e~~~~~~~~~~~~~~~lD~~~~y~~~~~~~~~~~~~~~~~~l~~~~~~~v~~-~dg~~~~~~----~vgg--~i 613 (823) +...||.. .-|...+.+|+...... ........++.|++|++|.+ +||...... ...| .+ T Consensus 590 ----~~~~lD~~-------~~~~~~~~~~~~~~~~t--~~~~~~~~g~~~~eg~~v~~~adg~~~~~~~~~~~~~g~~~l 656 (794) T protein:vir:10 590 ----YRAFMDMK-------IRYTIPSGTYNDDTFTT--SIHIPTIYGANFGRGKITVLEPDGKITVFEQPTSGWQSDPWL 656 (794) T ss_pred ----ceeeeecc-------eEEEecCcccccccccc--eEEcccccCcccccccEEEEecCCceeeeeeeeeeeecceEE Confidence 11111110 00122223443322211 11112234789999999987 888654322 2233 33 Q ss_pred Ee--cccCceeEeeeEEEEEEEEeeEEecCCCceeeEecc-eeeeeeeeeeeecccccceeeeccc--------ccccce Q lcl|Aclame:pro 614 QF--PYTGADPDTGYEVSKELRCDIISVTSNTAVVVRANR-NVPPSLRNVATTNWQMARRTFGGLS--------HLEGQT 682 (823) Q Consensus 614 ~l--~~~~~~~~vG~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~~g~~~~~~~gl~--------~l~g~~ 682 (823) ++ +.++++++||++|+++++++++.+..+.+....... ..+.+++++.........-.+ .+. .+.|.. T Consensus 657 ~i~~~~~a~~v~vGl~y~s~~~~~~~~i~~~~~~~~~~~~~~gr~~l~r~~~~~~~tg~~~v-~v~~~~~~~~~~~~~~~ 735 (794) T protein:vir:10 657 RLSGNLEGREVFIGFNINFVYEFSKFLIKQTTDDGSTSTEDIGRLQLRRAWVNYEDSGTFDI-YVENQSSNWKYTMAGAR 735 (794) T ss_pred EecCCCCCceEEEeeeeeEEEEecceEEEccCCCcceeeeccccEEEEEEEEEeeccccEEE-EEcCCccccceeeccce Confidence 33 478999999999999999999999877654443221 112233333222211111111 011 122222 Q ss_pred EEEEeCCceeCCEEEcCCEEEecCC--CcEEEECcccceEEEEcceecCC---CCcccccceeE Q lcl|Aclame:pro 683 VNILSDANVEPQKVVSGGAVTLESP--GAVVHIGLPITAEFETLDINING---QETLLDKKQVI 741 (823) Q Consensus 683 v~v~~dg~~~~~~~v~~g~itl~~~--~~~~~~gl~~~~~~~~l~~~~~~---~~~~~~~~~~i 741 (823) + .......++..+..|.+++|-. +.... |-+.++ .+||..+-+ .|.-.-|.||| T Consensus 736 ~--~~~~~~~g~~~~~tg~~~vp~~g~~~~~~--v~i~~d-~P~P~tvlsi~~eg~y~~r~~~v 794 (794) T protein:vir:10 736 L--GSNTLRAGRLNLGTGQYRFPVVGNAKFNT--VYILSD-ETTPLNIIGCGWEGNYLRRSSGI 794 (794) T ss_pred e--ccccccccccccccceEEEEecccCceEE--EEEEEC-CCCceEEEEEEEEEEEeccccCC Confidence 1 1111122223334466666542 33333 333444 566666432 45566777777 No 45 >protein:vir:105563 Length: 396 # NCBI annotation: hypothetical protein # Family: family:all:27455 # MgeID: mge:1540 # MgeName: F116 # Cross-refs: genbank:acc:YP_164316;genbank:gi:56692963;genbank:GeneID:3197174 Probab=93.55 E-value=0.0072 Score=32.34 Aligned_cols=370 Identities=12% Similarity=0.031 Sum_probs=142.2 Q ss_pred Cceeeeec----ccccccccccccccchHHHHHHHHhhhhcceeeecCCceecCcceeeeeecCCCCCceEEEEEECCCC Q lcl|Aclame:pro 1 MAISWIQP----SFAGGEIGPSLYGRIDMAKYQVALRKCDNFIVRQYGGVENRPGTRFVGAAKYPNRKCRLIPFQFSTVQ 76 (823) Q Consensus 1 M~~~~~q~----sF~~GElsP~l~~r~Dl~ry~~q~~~~~N~~~~~~GGl~rRPGt~fva~~~~~~~~~rLipF~~~~~~ 76 (823) |+..-+-+ |-.++|- .-..|-+--..-+++..|.=.+..|=.+||-|.+-+.... |-|+.-+.-. T Consensus 1 ~~~~~~~~~~ginnv~~e~----~l~~~~~~~~~~~r~a~nvdi~~~G~~~~r~~~tr~~~g~-------l~~~~~~~~~ 69 (396) T protein:vir:10 1 MATTSLVPLAGINNVAEDA----ALQRGGESPRLYVRDAVNIDLSPAGKAQLRASVRQVTDQP-------FRQLWQSPLH 69 (396) T ss_pred Ccceeeeeeeccccccccc----ccccCCCcccceeeeeeeecccCCCchhhhccCcccCCce-------ecccccCccc Confidence 77544332 2223332 1111111233468899999999999999999988666432 2222223333 Q ss_pred eEEEEEeCCeEEEEECCceEeeccccceEEeccccccccceeEEEEeCcEEEEEeCCceEEEEEEcCCCCceeeeEEEec Q lcl|Aclame:pro 77 TYALEFGHQYMRVIKDGALVLNSSNVIYEIATPYTEADLFRIKFTQSADVLTLVHPAYPPKELRRYAHDNWQLVDVVTKN 156 (823) Q Consensus 77 ~Y~l~fg~~~irV~~~~g~v~~t~~~~~~~~tPyt~~~l~~L~~~qsaD~~fIvn~~~~p~~l~r~~~~~ws~~~~~f~~ 156 (823) .+.+....+.+.-++++.- ...|.......-+.+.+..|-+|..+...+--.. ......+ T Consensus 70 ~~~~~~~~~tl~~~~~~~w----------~~~~~v~v~~~pva~d~~~~Rvy~t~~~~p~~~~---~~~~y~L------- 129 (396) T protein:vir:10 70 GDAFGALGDQWGKVDPHSW----------TFEPLAQIGEGDLSHEVLNNRVCVAGTAGIFTYD---GAQAERL------- 129 (396) T ss_pred cceeeeCCceEEEEeCCeE----------EEEeeeeeccCchhccccCCeEEEEcCCCceeee---CCcceec------- Confidence 3433333333333332210 0001100111222334456677777655442210 0000000 Q ss_pred cccccccccceEEEEecccCCceeeeccccccccccccceEEEcccccceecceeeeeeeeeeeeEEeccceeeeEec-- Q lcl|Aclame:pro 157 GPFEDINIDESLTVYASASTGTITLTASASIFGAEQVGKLFYLEQPAVDSVPVWETSKSTSIGDIRRADSNYYRAVTA-- 234 (823) Q Consensus 157 ~p~~~i~~~~s~t~t~~a~t~~~Tvtas~~~~~a~~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 234 (823) .+... ....++.. ..+.+.+...+.. .-++ .+.....- .-....++. T Consensus 130 ----~vp~P----------~~a~~~a~----~Gsl~~~~~~Y~~-t~V~---~~gEEs~p---------~~~S~~v~~~g 178 (396) T protein:vir:10 130 ----TLDTP----------APPLLVAG----AGSLSQGTYGAAV-AWLR---GPQESAPS---------LIAFAEVTDAG 178 (396) T ss_pred ----CcCCC----------cccccccc----cCccCCceEEEEE-EEEe---cCCCcCcc---------cccccccCCCC Confidence 00000 00011100 1111111111100 0000 00000000 000000000 Q ss_pred ccceeecccccCceEEEEeceeccccceEEEEEEecCccE-EEEEEecCccccccEEEEeeccccccccCcceecccCcc Q lcl|Aclame:pro 235 GKTGTLRPSHTEGTSWDGWGGSGDDDTGIEWEYLHSGFGI-ARITAVNGTTATAEVISYIPSQVVGEDNASYKWAKYAWN 313 (823) Q Consensus 235 ~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~~t~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~w~ 313 (823) +...++++.. ..+.....-|.....|. ... +..++.....-..++..|...+-. T Consensus 179 g~~vtl~~~~-------------~~~i~~~RiYrS~~~G~~~~l------------~aE~~a~~~s~vlPs~~w~gpP~~ 233 (396) T protein:vir:10 179 ALEVTFPLCL-------------DASVTGARLYLTRANGGELLL------------AGDYPLGAATVILPTLPELGRPAQ 233 (396) T ss_pred CcEEEEEccc-------------CCCcceEEEEEeCCChhhhhh------------eehhccceeeeeeecCCCCCCCcc Confidence 0111111100 00000000011111110 000 000000000001133344322211 Q ss_pred --cCCCCcc--EEEEEeceEEEEeCcCCCcEEEEEcccCccccc-ccccCCCCCcEEEEEcCCCceEEEEEeec-CcEEE Q lcl|Aclame:pro 314 --SVNGYPG--TVVYYQQRLYFAASTAFPQTIWASRTGDYKDFG-KSNPTQDDDRIIYTYAGRQVNEIRHLIDV-GSLVA 387 (823) Q Consensus 314 --~~~g~Ps--~v~f~q~RL~f~~~~~~p~~V~~Sr~gdy~nF~-~~t~~~DdD~I~~~~~~~~~~~i~~~v~~-~~Ll~ 387 (823) .--+.|. .+++|.+||+++.+. .||||...-+.=+. +..-.+-+ ..|.-+.+. .+|+| T Consensus 234 ~~gL~pmP~G~~~A~faGRi~~A~Gn----~V~FSEp~~Ph~~~~~~~~~~~~------------~~Iv~lapv~~gL~V 297 (396) T protein:vir:10 234 FRHLSPMPTGKHLAYWRGRLLIARAN----VLRFSEALAYHLHDERYGFVQMP------------QRITFVQPVDGGIWV 297 (396) T ss_pred ccccccCchhHhhhhhcceEEEEeCC----EEEEecCCCCceecchhccCCCC------------CceEEEEEecCeEEE Confidence 1123443 478999999999995 59999988763121 11111111 235666675 58999 Q ss_pred EecCcEEEEecCCCccccccceEEEEeecc---cCc---------c-cccEEeCCeEEEEecCCCEEEEEEeecccccee Q lcl|Aclame:pro 388 LTSGGEYVITGDQNKVLTPSSFAFSSQGSN---GSS---------N-VPPIAVANIALFVQEKGSVVRDLAYSFDVDGYQ 454 (823) Q Consensus 388 ~t~~~q~~l~~~~~~~lTP~~~~i~~~s~~---g~~---------~-~~Pv~vg~~v~f~~~~g~~v~e~~~~~~~d~~~ 454 (823) +|.++-|.+.|.. |++.+..+.... -++ . -..+..+..++|.++.| +.--..+.. T Consensus 298 gt~~~~y~~~G~d-----P~sms~~~l~~~~pvp~S~v~~p~~~~s~rs~~~~~~~~lwas~dG--l~~g~~~G~----- 365 (396) T protein:vir:10 298 GQVDHVAFLDGAD-----PASLSVSRRASRAPVPGSAVLVPAEVVGTNASPDGSPVAVWLAENG--YVMGTSSGA----- 365 (396) T ss_pred EEcCcEEEEEcCC-----hhHcceeecccCCCcccchhcccchhhhcccccccCcEEEEccCCc--EEEEcCCce----- Confidence 9999999999753 455544444321 111 1 12345688899999988 321111111 Q ss_pred ecchHHHHHHhcCCCceEEEEEcCCCcEEEEEEe Q lcl|Aclame:pro 455 GNDLTILANHLFQKHSIVDWCFSIVPYSSAFCIR 488 (823) Q Consensus 455 ~~dlt~~~~hl~~~~~~~~~a~~~~p~~~~~~~~ 488 (823) +..+....+.......-.|-...+..+.+.+ T Consensus 366 ---v~~l~~~~i~p~~~~A~~~~~~drRy~~~~~ 396 (396) T protein:vir:10 366 ---IAEVHAGVLAGITGRAGTSVVFDRRLLTAVS 396 (396) T ss_pred ---eeeecccccCCCcccceEEEeecCeEEEEeC Confidence 1111222333222222112123344444443 No 46 >protein:vir:9268 Length: 472 # NCBI annotation: 10 # Family: family:all:1540 # MgeID: mge:164 # MgeName: ST64T # Cross-refs: genbank:acc:NP_720332;genbank:gi:24371590;genbank:GeneID:955815 Probab=82.56 E-value=0.076 Score=26.72 Aligned_cols=416 Identities=13% Similarity=0.129 Sum_probs=139.3 Q ss_pred EEEeccccccccccceEEEEecccCCceeeeccccccccccccceEEEcccccceecceeeeeeeeeeeeEEeccceeee Q lcl|Aclame:pro 152 VVTKNGPFEDINIDESLTVYASASTGTITLTASASIFGAEQVGKLFYLEQPAVDSVPVWETSKSTSIGDIRRADSNYYRA 231 (823) Q Consensus 152 ~~f~~~p~~~i~~~~s~t~t~~a~t~~~Tvtas~~~~~a~~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (823) +.....| .+.+.... +..++..+.--+ .......+... +.+ ..++ T Consensus 1 m~~~~ip------------l~~g~~~~---~~~a~~~~~~pv----n~y~~~~~~~~---------------ss~-~Lr~ 45 (472) T protein:vir:92 1 MPIQQLP------------MMKGMGKD---FKNADYIDYLPI----NMLATPKEVLD---------------SSG-YLRS 45 (472) T ss_pred Cceeecc------------cccccccc---CccCcceeeeec----ccccccccccc---------------ccc-ceee Confidence 1100000 00000000 000000000000 00000000000 000 0000 Q ss_pred EecccceeecccccCceEEEEeceeccccceEEEEEEecCccEEEEEEecCccccccEEEEeeccc----ccccc----- Q lcl|Aclame:pro 232 VTAGKTGTLRPSHTEGTSWDGWGGSGDDDTGIEWEYLHSGFGIARITAVNGTTATAEVISYIPSQV----VGEDN----- 302 (823) Q Consensus 232 ~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~~~~~~~~~~~~~~~~~----~~~~~----- 302 (823) ..+-....-.++...|..+... .+.. +.-.+...++.++.-+.+...+.++ |.++- +.... T Consensus 46 ~pG~~~~a~~~G~~RG~~~~~~----~~~l-----y~V~G~~Ly~v~~~iG~i~gsgrVs-Ma~n~~~~av~~~~~~~~Y 115 (472) T protein:vir:92 46 FPGIAKRNDVNGVSRGVEYNTA----QNAV-----YRVCGGKLYKGEAVVGDVAGSGRVS-MAHGRTSQAVGVNGQLIEY 115 (472) T ss_pred cccceeecCCCCcccceeeeee----CCeE-----EEEeCcceEEEEeeEeeccCcccEE-EecCCeEEEEEECCceeEE Confidence 0000000000000001000000 0000 0000011111111111111111111 11100 00000 Q ss_pred --CcceecccCcccCCCCcc-------EEEEEeceEEEEeCcCCCcEEEEEcccCcccccccccCCCCCcEE-EEEcCCC Q lcl|Aclame:pro 303 --ASYKWAKYAWNSVNGYPG-------TVVYYQQRLYFAASTAFPQTIWASRTGDYKDFGKSNPTQDDDRII-YTYAGRQ 372 (823) Q Consensus 303 --~t~~~~~~~w~~~~g~Ps-------~v~f~q~RL~f~~~~~~p~~V~~Sr~gdy~nF~~~t~~~DdD~I~-~~~~~~~ 372 (823) .+..+....|-+-.+||. .|+|+..|++|.-. --+.++.|-..|-+. -|+.+ ++.+..+ T Consensus 116 ~~~~~~~t~~~~~~d~~f~~~dl~~~~dv~f~dGyfV~~~~--gt~~~~iS~l~d~~~---------~~~y~~fa~AE~~ 184 (472) T protein:vir:92 116 RYDGAVKTVSNWPADSGFTQYELGSVRDITRLRGRYAWSKD--GTDSWFITDLEDESH---------PDRYSAEYRAESQ 184 (472) T ss_pred EEecchhhhhcccCccccccccccceeEEEEecceEEEccC--CCceEEEeccCCccc---------cccccccccccCC Confidence 001111223333334554 58999999877521 112344444333221 12221 4556777 Q ss_pred ceEEEEEeecC-cEEEEecCcE--EEEecCCCccccccceEEEEee----cccCcc-cccEEeCCeEEEEecCCC---EE Q lcl|Aclame:pro 373 VNEIRHLIDVG-SLVALTSGGE--YVITGDQNKVLTPSSFAFSSQG----SNGSSN-VPPIAVANIALFVQEKGS---VV 441 (823) Q Consensus 373 ~~~i~~~v~~~-~Ll~~t~~~q--~~l~~~~~~~lTP~~~~i~~~s----~~g~~~-~~Pv~vg~~v~f~~~~g~---~v 441 (823) ++.|.-++..+ .|++|.+..- |..+|+. ++..+-+.+++ ..||.. -.=..+|++++|+...+. .| T Consensus 185 pD~Ivgi~~~~~~l~lfG~~TiEvw~ntG~a----d~~~fpy~r~~g~~i~~Gcaa~~sv~~~~~s~~~l~~~~~g~~~V 260 (472) T protein:vir:92 185 PDGIIGIGSWRDFIVCFGSSTIEYFSLTGAT----TVGAALYVAQPSLMVQKGIAGTYCKTPFADSYAFISHPATGAPSV 260 (472) T ss_pred CCceEEEEeeccEEEEEeccceEEEEecCCC----CcCcCceEEcCcceeeecccCcchhhecCceEEEEecCCCcccEE Confidence 88888888875 6888877755 7777653 22334445554 578854 334678999999988874 34 Q ss_pred EEEEeeccccceeecchHH-HHHHhcCCC------ceEEEEEcCCCcEEEEEEeCCCeEEEEEEeccccceeEEeeccCC Q lcl|Aclame:pro 442 RDLAYSFDVDGYQGNDLTI-LANHLFQKH------SIVDWCFSIVPYSSAFCIRDDGKLLVMTYLRDQQVFAWAPQSSTG 514 (823) Q Consensus 442 ~e~~~~~~~d~~~~~dlt~-~~~hl~~~~------~~~~~a~~~~p~~~~~~~~~dg~l~~~ty~~~q~v~aW~~w~~~g 514 (823) +.+ ++|+++=+|- -++..++.. .....+++.+.+.+..+...+ .-++|---.+|.---||.-..+. T Consensus 261 ~~~------~g~qa~rIST~aIE~~i~~y~~~e~~~a~~~s~~~eGH~fy~LtfP~-~Tw~yD~at~~~~e~W~~~~sg~ 333 (472) T protein:vir:92 261 YII------GSGQASPIATASIEKIIRSYTADELATGVMEALRFDSHELLIIHLPR-HVLVYDASSSQNGPQWCVLKTGL 333 (472) T ss_pred EEc------cCceeEEecCHHHHHHHHhcCcchhceeeEEEEEecCeeEEEEEcCC-ceEEEEcccCcCCceeeeecCCC Confidence 333 4666666642 223333322 234567777788777777665 33343322333222488887753 Q ss_pred ---ceEEEEEEecC--------CCCEEEEE--EEecCCCcEEEEEEeec-cccCCcccceeEeeeeeEE-eccccceeee Q lcl|Aclame:pro 515 ---KYESTCSISEG--------NEDAVYFV--VNRTVNGQTVRYIERLS-SRLFTSDEDAFFVDSGLSY-DGRNTSDRTM 579 (823) Q Consensus 515 ---~~~~~~~~~~~--------~~d~l~~~--v~r~~~g~~~~~~e~~~-~~~~~~~~~~~~lD~~~~y-~~~~~~~~~~ 579 (823) .....+++... .+..||.+ -..+.+|.. +|++. .+.+..+..++| |--+.- .|..+ T Consensus 334 ~~~~~R~~~~~~~~g~~ivGD~~nG~ly~l~~~~~t~~~~~---~~~~~~~P~~~~dn~R~~-d~eve~~~Gv~q----- 404 (472) T protein:vir:92 334 YDDVYRAIDFMYEGNQITCGDKSEAVTGQLQFDISSQYDKQ---QEHLLFTPIFKADNARCF-DLEVESSTGVAQ----- 404 (472) T ss_pred cccceeEEEEEeeCCeEEEEEcCCCeEEEEeccccccCCCc---ceEEEEeceEecCCCEEE-EEeeeccCCCCC----- Confidence 24455555322 23456666 233333333 33332 122222222332 321111 11111 Q ss_pred EeeccccCcCccCcceEEe---cCCeEEcccccccEEEecccCceeEeeeEEEEEEEEeeEEecCCC-ceeeEecceeee Q lcl|Aclame:pro 580 TITGGSGEWDYLAEYTISV---SGGAYFTSSDVGAQLQFPYTGADPDTGYEVSKELRCDIISVTSNT-AVVVRANRNVPP 655 (823) Q Consensus 580 ~~~~~~~~l~~~~~~~v~~---~dg~~~~~~~vgg~i~l~~~~~~~~vG~~~~~~~~~~~~~~~~~~-~~~~~~~~~v~~ 655 (823) .+. -|.+ .||..+.... .|.+..+.. |.+++++...--.... +-..+.-..++. T Consensus 405 -----------~~d-~v~L~wSddG~~~~~~~---~~~~g~~g~-------~~tr~~~~RlG~~r~~v~f~~r~~~~~~~ 462 (472) T protein:vir:92 405 -----------YAD-RLFLSATTDGINYGREQ---MIEQNEPFV-------YDKRVLWKRVGRIRRLIGFKLRVITKSPV 462 (472) T ss_pred -----------cCc-eEEEEeeccccccccce---eeccCCccc-------hhcceeeeeeeecccceeEEEEEEecCcc Confidence 111 1111 2222221110 011111000 0011110000000000 000000000000 Q ss_pred eeeeeeeeccc Q lcl|Aclame:pro 656 SLRNVATTNWQ 666 (823) Q Consensus 656 ~~~~~~~~~~g 666 (823) .+..+..-- . T Consensus 463 ~l~g~~~~~-E 472 (472) T protein:vir:92 463 TLSGCQIRL-E 472 (472) T ss_pred eeeeeEEee-C Confidence 000000000 0 No 47 >protein:vir:78703 Length: 905 # NCBI annotation: tail tube B # Family: family:all:825 # MgeID: mge:1856 # MgeName: Syn5 # Cross-refs: genbank:acc:YP_001285450;genbank:gi:148724484;genbank:GeneID:5220174 Probab=74.66 E-value=0.16 Score=25.01 Aligned_cols=646 Identities=10% Similarity=0.011 Sum_probs=166.0 Q ss_pred CceeeeecccccccccccccccchHHHHHHHHhhhhcceeee------cCCceecCcceeeeeecCCCCCceEEEEE--- Q lcl|Aclame:pro 1 MAISWIQPSFAGGEIGPSLYGRIDMAKYQVALRKCDNFIVRQ------YGGVENRPGTRFVGAAKYPNRKCRLIPFQ--- 71 (823) Q Consensus 1 M~~~~~q~sF~~GElsP~l~~r~Dl~ry~~q~~~~~N~~~~~------~GGl~rRPGt~fva~~~~~~~~~rLipF~--- 71 (823) +..+.... ++-+.+| .|++--..+....+.+-.-. -.+|.-|-..+..+.+.+....++..+.. T Consensus 176 ~~~t~~~~--~a~~~s~-----~s~~~~~~g~~~~~~~~~~~~~t~~~~~~l~f~~~~~~~~~~~~~~~~~~~~~~~~l~ 248 (905) T protein:vir:78 176 QQVKVYRA--KALEISP-----GSFEVEDGGVCTEHDVQNYTNQTIGSSTGLAFQVRVQCAAYLENNEYRSRYNVSVVLQ 248 (905) T ss_pred eeeeeecc--ccceecc-----ccccccccccccccceeeeecceeeccCCceeEEeeccccccCCCcccccccceeeee Confidence 11000000 0111111 12222222222222111111 01122111112222222221112211110 Q ss_pred ----E-CCCCeEEEEEeCCeEEEEECCc-e-EeeccccceEEecccc--c---------cc-------cceeEEEEeCcE Q lcl|Aclame:pro 72 ----F-STVQTYALEFGHQYMRVIKDGA-L-VLNSSNVIYEIATPYT--E---------AD-------LFRIKFTQSADV 126 (823) Q Consensus 72 ----~-~~~~~Y~l~fg~~~irV~~~~g-~-v~~t~~~~~~~~tPyt--~---------~~-------l~~L~~~qsaD~ 126 (823) - ...+.+.+....++-+|--.++ . ..........-.+|+. + +. .....+...+.+ T Consensus 249 ~g~~~~~~~~~~~v~~~g~~y~i~i~~~~~~~~~~~~~~~~~~t~~d~~a~~~~~~~i~~~l~~~~~~~~~~~~~~~g~~ 328 (905) T protein:vir:78 249 NGGTGFRKGDMITVNLNGRDYNIRVTQEEFVYTYASDGTAAHTTPQDSTAGTLDIGQITAGLVNSVNLISNYSAQAVGNV 328 (905) T ss_pred ccccccccCccEEEeeccceEEEEEecceeEEEecCCCcccccCccCccCccccHHHHHHHHHHhhcccccEEEEecCcE Confidence 0 0011111111112222211111 0 0000110111122221 1 00 011233444444 Q ss_pred EEEEeCCceEEEE-EEcCCCCceeeeEEEeccccccccccceEEEEecccCCceeeeccccccccccccceEEEcccccc Q lcl|Aclame:pro 127 LTLVHPAYPPKEL-RRYAHDNWQLVDVVTKNGPFEDINIDESLTVYASASTGTITLTASASIFGAEQVGKLFYLEQPAVD 205 (823) Q Consensus 127 ~fIvn~~~~p~~l-~r~~~~~ws~~~~~f~~~p~~~i~~~~s~t~t~~a~t~~~Tvtas~~~~~a~~vg~~~~~~~~~~~ 205 (823) +||.+++-+.-.+ ...+..+|-+..+.... . ....+-.-...|....+...+. T Consensus 329 i~v~~~~~~~~~~~~~~g~~~~~~~~~~~~v-------------------~------~~~~Lp~~~~~g~~v~v~~~~~- 382 (905) T protein:vir:78 329 IEIERTDGRDFNLGVRGGATNRAMTAIKGTA-------------------N------SIVDLPGQCFDGFELKVINTEN- 382 (905) T ss_pred EEEEecCCCccEEEEeccCCcceEEEEeccc-------------------c------ccccCccccCCCcEEEEEeCCC- Confidence 5554443221111 11122222221110000 0 0000000000111111111000 Q ss_pred eecceeeeeeeeeeeeEEecccee-eeEecccceeecccccCceEEEEeceec----cccceEEEEEEecCccEEEEEEe Q lcl|Aclame:pro 206 SVPVWETSKSTSIGDIRRADSNYY-RAVTAGKTGTLRPSHTEGTSWDGWGGSG----DDDTGIEWEYLHSGFGIARITAV 280 (823) Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~t~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~g~~~~t~~ 280 (823) .....+| +..+..... .....|.+..... .......+..+....|.+...++ T Consensus 383 -----------------~~~d~yyv~~~~~~~~~------~~~~~W~E~~~~~~~~~~~~~tmp~~l~r~~~g~f~~~~~ 439 (905) T protein:vir:78 383 -----------------AESDDYYVVFRSAAEGI------PGSGSWEETVAPGIERGFNTSTMPHALIRQADGNFTLEAL 439 (905) T ss_pred -----------------CCcceEEEEEEecccCC------cCceeEEEecccccccccccccccEEEEEecCceEEEEEe Confidence 0001111 111111100 1112344332222 12233456666666677766665 Q ss_pred cCccccccEEEEeeccccccccCcceecc----cCcccCCCCccEEEEEeceEEEEeCcCCCcEEEEEc-----ccCccc Q lcl|Aclame:pro 281 NGTTATAEVISYIPSQVVGEDNASYKWAK----YAWNSVNGYPGTVVYYQQRLYFAASTAFPQTIWASR-----TGDYKD 351 (823) Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~t~~~~~----~~w~~~~g~Ps~v~f~q~RL~f~~~~~~p~~V~~Sr-----~gdy~n 351 (823) .+.+...+............+.++|..+. ..|.++-. +++ .+.+|+...-. ....+-+- -.|..+ T Consensus 440 ~~~~~~~~~~~r~~Gd~~Tnp~psf~g~~is~v~f~q~RL~---f~s--~~~v~~Srtgd-~~nF~~~t~~~~~DdDpI~ 513 (905) T protein:vir:78 440 NDEGTITGWAQREVGDDDTNPKPSFVGRGISDMFFYNNRLG---FLS--EDAVIMSQPGD-YFNFFVTSAITISDSDPID 513 (905) T ss_pred ccccccccccccccCCcccCCCCcccCCCcceEEEEcceEE---Eec--CCeEEEEccCC-ccccccccccCCCCCccEE Confidence 44332222211111111111111111000 01111111 111 33444433321 11222221 123333 Q ss_pred ccccccCCCCCcEEEEEcCCCceEEEEEeecCcEEEEecCcEEEEecCCCccccccc-e----EEEEeeccc-CcccccE Q lcl|Aclame:pro 352 FGKSNPTQDDDRIIYTYAGRQVNEIRHLIDVGSLVALTSGGEYVITGDQNKVLTPSS-F----AFSSQGSNG-SSNVPPI 425 (823) Q Consensus 352 F~~~t~~~DdD~I~~~~~~~~~~~i~~~v~~~~Ll~~t~~~q~~l~~~~~~~lTP~~-~----~i~~~s~~g-~~~~~Pv 425 (823) +..++ ...+.|.-.+..++. ..+...+.-++++.+++ .|++. +-.|.+.+ . .++++.--. +--+++. T Consensus 514 ~~~ss--~~~~~i~~~v~~~~~---L~ifT~g~ef~lsg~~~-~lTP~-s~~i~~~S~~~~~~~v~Pv~vG~~vlFv~~~ 586 (905) T protein:vir:78 514 VTASS--TKPAILRAAIGAPKG---LILFAENSQFLLASQEV-VFSTA-TIKLTEISDYFYRSLAKPVSTGVSIAFVSEA 586 (905) T ss_pred EEEcC--CcceeeEEEeecCCc---EEEEecCceEEEecCCc-cccce-eEEEEeEEeecccCCCCcEEeCCeEEEeecC Confidence 33222 223334433333211 00111112222221111 11110 00111110 0 011111000 0001111 Q ss_pred E----eCCeEEEEecCCCE--------EEEEEeeccccceeecchHHHHHHhcCCCceEEEEEcCCCcEEEEEEeC--C- Q lcl|Aclame:pro 426 A----VANIALFVQEKGSV--------VRDLAYSFDVDGYQGNDLTILANHLFQKHSIVDWCFSIVPYSSAFCIRD--D- 490 (823) Q Consensus 426 ~----vg~~v~f~~~~g~~--------v~e~~~~~~~d~~~~~dlt~~~~hl~~~~~~~~~a~~~~p~~~~~~~~~--d- 490 (823) . +- .+.|.....+. +..+........+.+. +....|........+++.... . T Consensus 587 g~~s~vr-e~~y~~~~d~y~a~DlT~~a~hl~~g~v~~~~~s~------------~~~~v~~~~~~~~l~~ytyl~~~~e 653 (905) T protein:vir:78 587 DTYSKIF-EMSIDSVDNRPQVADITRIVPEYVPTGLTWSVSTP------------NNSMMLFGDNSNTAYIFKFFNQGNE 653 (905) T ss_pred CCeeEEE-EEEeeecccceehhHHHHHHHHhcCCceEEEEecC------------CCcEEEEEcCCCeEEEEEeecCCCc Confidence 0 00 01121111100 0000000000000000 000111111111111111110 0 Q ss_pred CeEEEE-EEeccccceeEEeeccCCceEEEEEEecCCCCEEEEEEEecCCCcEEEEEEeeccccCCcccceeEeeeeeEE Q lcl|Aclame:pro 491 GKLLVM-TYLRDQQVFAWAPQSSTGKYESTCSISEGNEDAVYFVVNRTVNGQTVRYIERLSSRLFTSDEDAFFVDSGLSY 569 (823) Q Consensus 491 g~l~~~-ty~~~q~v~aW~~w~~~g~~~~~~~~~~~~~d~l~~~v~r~~~g~~~~~~e~~~~~~~~~~~~~~~lD~~~~y 569 (823) ..+.+- ++.-...+....-. .+.+- ++..-..++. ..+.+.+-.......+++ +....+....+.++.|++++| T Consensus 654 q~v~AWsrw~~~G~~~~~a~i--~d~~~-~vV~r~~~G~-~~~~~~~l~~~~~~~~~d-~~~~~~~~~~d~~~~~~~~t~ 728 (905) T protein:vir:78 654 RQVAGWSKWILPGEQRMCGFF--ADTGY-FVLYDSTTGS-YVLSAMELLDDPDSASID-TAFSSFLPRLDNYVVKSDLTV 728 (905) T ss_pred eeEEeEEEEecCCCeEEEEEE--cCCEE-EEEEEccCCe-EEEEEEeeccccCccccc-cceeeeeeccceeeeccccee Confidence 011111 11100000000000 11110 0000111111 111111110000000110 111223334566777888776 Q ss_pred eccccceeeeEeeccccCcCccCcceEEe-cCCeEEc----ccccccEEEecccCceeEeeeEEEEEEEEeeEEecCCCc Q lcl|Aclame:pro 570 DGRNTSDRTMTITGGSGEWDYLAEYTISV-SGGAYFT----SSDVGAQLQFPYTGADPDTGYEVSKELRCDIISVTSNTA 644 (823) Q Consensus 570 ~~~~~~~~~~~~~~~~~~l~~~~~~~v~~-~dg~~~~----~~~vgg~i~l~~~~~~~~vG~~~~~~~~~~~~~~~~~~~ 644 (823) -.......... ...++.|+++..+.+ +||.+.. ..+.++.+++ ..++.++|||+|+++++++++.+..++. T Consensus 729 ~~~~~~~~~~~---~~~~~~~~~~~~~~~~~dG~~~~~~~~~~~~~~~~t~-~~a~~v~VGl~Y~s~v~~~p~~~~~~~~ 804 (905) T protein:vir:78 729 VDNGDGTLTVD---LEAGQAMTGATPVIMFTDGPSEFAFSQPTITAGQFTV-DTTDDFVVGFKYETKITLPGFFTSEENK 804 (905) T ss_pred cccCcceEeee---ccCccccccceeEEEeeCCceeeeEEEEEeeceeecc-ccCCeEEEeeeeeEEEeecceEeccCCC Confidence 21111111111 112455666666544 6765432 2223455554 4678899999999999999998877665 Q ss_pred eeeEecceeeeeeeeeeeecccccceeeeccccc--cc--ceE-EEEeCCceeCCEEEcCCEEEecC--CCcEEEECccc Q lcl|Aclame:pro 645 VVVRANRNVPPSLRNVATTNWQMARRTFGGLSHL--EG--QTV-NILSDANVEPQKVVSGGAVTLES--PGAVVHIGLPI 717 (823) Q Consensus 645 ~~~~~~~~v~~~~~~~~~~~~g~~~~~~~gl~~l--~g--~~v-~v~~dg~~~~~~~v~~g~itl~~--~~~~~~~gl~~ 717 (823) .....++.+...-.++..+......-.-.+.+.. .. +.. ..++|+.+. ...|.+++|- .+....| -+ T Consensus 805 s~~~~~~rI~rv~lr~~~Sg~~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~p~----~~tg~~~vP~~g~~~~~~v--~I 878 (905) T protein:vir:78 805 ADRVYAPIVEFLYLDLYYSGRYQIEVDRIGYDTINIDAGSIDANIYLADGAPL----KEIATENVPLFTPGDQVTV--TI 878 (905) T ss_pred cccccceEEEEEEEEeecceeEEEEEcCCCcceecccccceecCcccCccccc----ccccEEEEEeeccCceeEE--EE Confidence 4443333332222222222111111000111111 00 100 012333322 2345555553 2333333 22 Q ss_pred ceEEEEcceecCCCCc-ccccceeEeeE Q lcl|Aclame:pro 718 TAEFETLDININGQET-LLDKKQVIPSV 744 (823) Q Consensus 718 ~~~~~~l~~~~~~~~~-~~~~~~~i~~~ 744 (823) .++ .+||+.+-+-+. ..-.+|+..+| T Consensus 879 ~sd-~PlP~tvlsi~weg~Yn~r~~~~~ 905 (905) T protein:vir:78 879 KAP-DPFPSAITGYSWQGHYNRRGIAFI 905 (905) T ss_pred EEC-CCCcEEEEEEEEEEEeccceeecC Confidence 222 455554332100 11233344444 No 48 >protein:vir:99677 Length: 794 # NCBI annotation: Tail tubular protein B # Family: family:all:825 # MgeID: mge:1523 # MgeName: VP4 # Cross-refs: genbank:acc:YP_249591;genbank:gi:68299742;genbank:GeneID:3799992 Probab=71.42 E-value=0.2 Score=24.47 Aligned_cols=604 Identities=13% Similarity=0.080 Sum_probs=162.9 Q ss_pred CceeeeecccccccccccccccchHHHHHHHHhhhhcceeeecCCce----ecCc----------ceeeeeecCCCCCce Q lcl|Aclame:pro 1 MAISWIQPSFAGGEIGPSLYGRIDMAKYQVALRKCDNFIVRQYGGVE----NRPG----------TRFVGAAKYPNRKCR 66 (823) Q Consensus 1 M~~~~~q~sF~~GElsP~l~~r~Dl~ry~~q~~~~~N~~~~~~GGl~----rRPG----------t~fva~~~~~~~~~r 66 (823) |+.+-+.+.=.+|+..|...+=+++..-+-+...-++ ..|... ...+ ..+++. .-..+ T Consensus 133 ~~p~~~~~~~~~~~~~~~~~~~~~v~~g~y~~~y~v~----i~gs~ta~~~tp~~~~~~~~~~~s~~~ia~----~l~~~ 204 (794) T protein:vir:99 133 VATAQGTTNTPSGLAPFGHFGLVVIRGGQYGRTYRIK----VNGSVEASFETPLGDQVAHAKQIDIAYIID----QLAAG 204 (794) T ss_pred eeeeEeeeeccccCcCCCceEEEEeccCCCCceEEEE----ecCCcccceeeccCcccccccccchhhhhh----hhHhh Confidence 2222111111222333322222222100000000000 000000 0000 000000 00000 Q ss_pred EEEEEECCCCeEEEEEeCCeEEEEECCceEeeccccceEEec--cccccccceeEE-EEeCcEEEEEeCCceEEEEEEcC Q lcl|Aclame:pro 67 LIPFQFSTVQTYALEFGHQYMRVIKDGALVLNSSNVIYEIAT--PYTEADLFRIKF-TQSADVLTLVHPAYPPKELRRYA 143 (823) Q Consensus 67 LipF~~~~~~~Y~l~fg~~~irV~~~~g~v~~t~~~~~~~~t--Pyt~~~l~~L~~-~qsaD~~fIvn~~~~p~~l~r~~ 143 (823) |. .-.|.+.-..+++++...++.... ++.+ .|.......+.. +|+...+=-.|++-...++...+ T Consensus 205 l~------~~g~~v~~~~g~~~i~~~~~~~v~------t~s~~~g~~~t~~~~~~~~v~~~~~Lp~~~~~G~~v~v~~~~ 272 (794) T protein:vir:99 205 LI------NKGWAVTKGSGYFYFSKSGSVIIN------SLEVEDGYNGQLAWGIINDVQKTTQLPVYAPNNYIIRVSGDP 272 (794) T ss_pred hh------cccceEEeCCeEEEEEecCCceeE------EEEeecCCCCceeeEEeeeccceeecccCCCCCeEEEEeccC Confidence 00 000112222333333332221110 1111 010000000000 00000000001100000111000 Q ss_pred CCCceee-eEEEeccccccccccceEEEEecccCCceeeeccccccccccccce-EEEcccccceecceeeeeeeeeeee Q lcl|Aclame:pro 144 HDNWQLV-DVVTKNGPFEDINIDESLTVYASASTGTITLTASASIFGAEQVGKL-FYLEQPAVDSVPVWETSKSTSIGDI 221 (823) Q Consensus 144 ~~~ws~~-~~~f~~~p~~~i~~~~s~t~t~~a~t~~~Tvtas~~~~~a~~vg~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (823) ..+.-. .+.|.. ..+....++....+..-..... ..+...... .+ T Consensus 273 -~~~~~~y~v~~~~------------------~~~~w~e~~~~~~~~~~~~~t~p~~~v~~~~~--------------~~ 319 (794) T protein:vir:99 273 -TLNQDDYYVRFDA------------------SRNVWTECPAPNIKADYNKATMPHVLIREADG--------------TF 319 (794) T ss_pred -CCCCCceEEEEEc------------------CCceEEeeccceeecceeccceEEEEeccCCC--------------ce Confidence 000000 000000 0000000000000000000000 000000000 00 Q ss_pred EEeccceeeeEecccceeec-ccccCceEEEEeceeccccceEEEEEEe-cCccEEEEEEecCccccccEEEEeecccc- Q lcl|Aclame:pro 222 RRADSNYYRAVTAGKTGTLR-PSHTEGTSWDGWGGSGDDDTGIEWEYLH-SGFGIARITAVNGTTATAEVISYIPSQVV- 298 (823) Q Consensus 222 ~~~~~~~~~~~~~~~t~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~t~~~~~~~~~~~~~~~~~~~~- 298 (823) ...... +..-..|...+.. |+-. +.....+ .....+... +..-+| -+..+. ...+.+.... T Consensus 320 ~~~~~~-w~~r~~Gd~~tnp~psf~-g~~is~v-------~f~q~RL~f~~~~~v~--~Srtgd-----~~nF~~~t~~~ 383 (794) T protein:vir:99 320 TFKQAD-WTHRAAGDDETNPYPSFI-GNSINDI-------FFFRNRLGFLSGENVI--LSGSGN-----YFNFFPESVAV 383 (794) T ss_pred eEeecc-ccccccCCcccCCCcccc-CcceeEE-------EEEeeeEEEecCCeEE--EEecCC-----ccccccccccC Confidence 000000 0000000000000 0000 0000000 000111111 111111 110000 0001111000 Q ss_pred ccccCcceecccCcccCCCCccEEEEEeceEEEEeCcCCCcEEEEEcccCcccccccccCCCCCcEEEEEcCC--CceEE Q lcl|Aclame:pro 299 GEDNASYKWAKYAWNSVNGYPGTVVYYQQRLYFAASTAFPQTIWASRTGDYKDFGKSNPTQDDDRIIYTYAGR--QVNEI 376 (823) Q Consensus 299 ~~~~~t~~~~~~~w~~~~g~Ps~v~f~q~RL~f~~~~~~p~~V~~Sr~gdy~nF~~~t~~~DdD~I~~~~~~~--~~~~i 376 (823) ..++...+.. .=++...-...+.-++.-|++..... | ..+|.. + -+.+++ |.+...+. -.+.+ T Consensus 384 ~~DdD~I~~~--~~~~~~~~i~~~v~~~~~L~l~t~~~--q-~~l~~~-~--~lTP~~-------~~~~~~s~~~~~~~~ 448 (794) T protein:vir:99 384 LTDTDPIDVA--VSTNRISILKYAVPFSEELILWSDQA--Q-FVLSSD-G--GLTPTT-------IRLDLTTEFEVTEQA 448 (794) T ss_pred CCCCccEEEE--ecCCcceeeEEEeecCCcEEEEecCc--E-EEEeCC-C--ccccee-------EEEEEEEEeeccCCC Confidence 0001101110 00111111133334443444443322 2 222321 1 122221 11111111 11112 Q ss_pred EEEeecCcEEEEecCcEE-------EEecCCCccccccceEEEEeeccc--Cccc-ccEEeCCeEEEEecCCCEEEEEEe Q lcl|Aclame:pro 377 RHLIDVGSLVALTSGGEY-------VITGDQNKVLTPSSFAFSSQGSNG--SSNV-PPIAVANIALFVQEKGSVVRDLAY 446 (823) Q Consensus 377 ~~~v~~~~Ll~~t~~~q~-------~l~~~~~~~lTP~~~~i~~~s~~g--~~~~-~Pv~vg~~v~f~~~~g~~v~e~~~ 446 (823) +=+.-.+.++.....+.| ..+-. ++......+++...-.+. .-.. -=..-...+++..+.-..+.-+.| T Consensus 449 ~Pv~vg~~v~f~~~~g~~~~v~r~~~~~~~-~d~y~a~Dlt~~~~hl~~~~~~~~~a~~~~~~~~v~~~~~~g~l~~~~y 527 (794) T protein:vir:99 449 RPYGIGRGVYFVSPRAKFSSVRRFYAVQDV-TQVKNAEDISAHVPYYVENGVFKMSGSSTENFLTILTEGNEQRVYFYKF 527 (794) T ss_pred CceEeCCeEEEEecCCCeeEEEEeeeeccc-cCceehhhHHHHHHHhcCCCeEEEEEeCCCCcEEEEEEcCCCEEEEEEE Confidence 222333455555555643 12211 122111111110000000 0000 000012344566555566766666 Q ss_pred eccccceeecchHHHHHHhcCCCceEEEEEcCCCcEEEEEEeCCCeEEEEEEeccccceeEEeeccCCceEEEEEEecCC Q lcl|Aclame:pro 447 SFDVDGYQGNDLTILANHLFQKHSIVDWCFSIVPYSSAFCIRDDGKLLVMTYLRDQQVFAWAPQSSTGKYESTCSISEGN 526 (823) Q Consensus 447 ~~~~d~~~~~dlt~~~~hl~~~~~~~~~a~~~~p~~~~~~~~~dg~l~~~ty~~~q~v~aW~~w~~~g~~~~~~~~~~~~ 526 (823) -.... -+++.--+.|-+.+. +..+|.....+.+.++++..+..+...+.-.++-.- +. .. T Consensus 528 ~~~~~---eq~v~aW~~~~~~g~-~~~~~~~~~~d~l~~~v~r~~~~~ler~~~~~~~~~-----~~-----------~~ 587 (794) T protein:vir:99 528 LYLQE---QLVQQSWSHWDFGVN-CRVLCCDMIGAVMHLIIDSPSGVLMEKIEFTQNTKD-----YP-----------DE 587 (794) T ss_pred eecCC---ceEEEeEEEEEcCCC-eEEEEEEEcCCEEEEEEEeCCCEEEEEEEeeeCCCC-----CC-----------Cc Confidence 43211 122234556666553 333333323344444444444443333311110000 00 00 Q ss_pred CCEEEEEEEecCCCcEEEEEEeeccccCCcccceeEeeeeeEEecc-ccceeeeEeeccccCcCccCcceEEe-cCCeEE Q lcl|Aclame:pro 527 EDAVYFVVNRTVNGQTVRYIERLSSRLFTSDEDAFFVDSGLSYDGR-NTSDRTMTITGGSGEWDYLAEYTISV-SGGAYF 604 (823) Q Consensus 527 ~d~l~~~v~r~~~g~~~~~~e~~~~~~~~~~~~~~~lD~~~~y~~~-~~~~~~~~~~~~~~~l~~~~~~~v~~-~dg~~~ 604 (823) .+.++ |.... -|...+..|... ..+.. ......++.|++|++|.+ +||.++ T Consensus 588 ~~~~~--------------lD~~~----------~~~~~~~~~~~~~~~~~~---~~~~~~g~~~l~g~~v~~~~dg~~~ 640 (794) T protein:vir:99 588 PYRLY--------------VDRKI----------EYTFPEGSYNDDDFKTRV---KLKDIYGSTPANGQYVFISLGGVTF 640 (794) T ss_pred cccee--------------eeeee----------eeeecccccccCcceeEE---eccccccccccCCceEEEEeCCcee Confidence 01111 11100 111112222211 11111 111234789999999987 888875 Q ss_pred ccc----c---cccEEEec--ccCceeEeeeEEEEEEEEeeEEecCCCceeeEecce-eeeeeeeeeeec--ccccceee Q lcl|Aclame:pro 605 TSS----D---VGAQLQFP--YTGADPDTGYEVSKELRCDIISVTSNTAVVVRANRN-VPPSLRNVATTN--WQMARRTF 672 (823) Q Consensus 605 ~~~----~---vgg~i~l~--~~~~~~~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~-v~~~~~~~~~~~--~g~~~~~~ 672 (823) ... . .++.++++ +++++++||++|+++++++++++..+.......... .+.+++++.... .+.-.-.+ T Consensus 641 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~vGl~y~s~~~~~~~~~~~~~~~g~~~~~~~gr~~l~r~~~~~~~tg~~~v~v 720 (794) T protein:vir:99 641 TFDPPAGGWQANDGLIEFDGDLRGTKFFVGEAYTFLYEFSKFLIKTTDTADGVATEDIGRLQLRRAWVNYDKSGNFRVEV 720 (794) T ss_pred eeecccceEecCccEEEecCCCCCcEEEEeeeeeEEEeecceEEeecCCCCceeeeccceEEEEEEEEEeecccceEEEE Confidence 421 1 14556665 789999999999999999999987654332211000 001121111111 01100001 Q ss_pred ec--cc---ccccceEEEEeCCceeCCEEEcCCEEEecCC--CcEEEECcccceEEEEcceecCC---CCcccccceeE Q lcl|Aclame:pro 673 GG--LS---HLEGQTVNILSDANVEPQKVVSGGAVTLESP--GAVVHIGLPITAEFETLDINING---QETLLDKKQVI 741 (823) Q Consensus 673 ~g--l~---~l~g~~v~v~~dg~~~~~~~v~~g~itl~~~--~~~~~~gl~~~~~~~~l~~~~~~---~~~~~~~~~~i 741 (823) .+ .+ .+.+..+ .....+.+...+..|.+++|.. +....+ .+.++ .+||+.+-+ .|.-.-|.||| T Consensus 721 ~~~~~~~~~~~~~~~~--~~~~~~~g~~~~~tg~~~vp~~g~~~~~~v--~i~~d-~P~P~tvlsi~~e~~y~~r~~~v 794 (794) T protein:vir:99 721 NNQGRTFTYNMTGNRL--STNELILGDESLDTGQFRYAVSGNATQVTV--SLISD-TPNPLSIIGGGWEGYYVRRSSGI 794 (794) T ss_pred CCCccceeeecccccc--ccccccccccccccceEEEEecccccceEE--EEEEC-CCCCEEEEEEEEEEEEeccccCC Confidence 10 00 1112211 1112222223344566666643 223332 33333 556665432 35566677777 No 49 >protein:vir:94713 Length: 785 # NCBI annotation: tail tube # Family: family:all:825 # MgeID: mge:1528 # MgeName: K1F # Cross-refs: genbank:acc:YP_338122;genbank:gi:77118200;genbank:GeneID:3707736 Probab=60.68 E-value=0.37 Score=22.96 Aligned_cols=572 Identities=10% Similarity=0.030 Sum_probs=163.8 Q ss_pred Cc-------------------------eeeee-c-----------ccccccccccccccchHHHHHHHHhhhhcceeeec Q lcl|Aclame:pro 1 MA-------------------------ISWIQ-P-----------SFAGGEIGPSLYGRIDMAKYQVALRKCDNFIVRQY 43 (823) Q Consensus 1 M~-------------------------~~~~q-~-----------sF~~GElsP~l~~r~Dl~ry~~q~~~~~N~~~~~~ 43 (823) |. ...++ + +..+....+......=.+....++....+.+.... T Consensus 132 ~~~~~~~~~~~~~~~~~~~i~~g~y~~~y~i~i~g~~~at~~t~~~s~a~~s~~~~s~~~i~~~l~~~l~a~~t~~t~~~ 211 (785) T protein:vir:94 132 GGSEKSHSGYNRKARALINLRGGQYGRTLKVGINGGVKVSHKLPAGNDAENDPPKVDAQAIGAALRDLLVTAYPTFTFDL 211 (785) T ss_pred eeeccCCcCCCCCCceEEEecccccceeEEEeeCCcceeEEEEccCccccccccccchHHHHHHHHHHhhccccceeEEe Confidence 11 00000 0 00001001111111111222222222222332222 Q ss_pred CCceecCcceeeeeecCCCCCceEEEEEECCCCeEEEEEeC--------------Ce-EEEEECCceEeeccccceEEec Q lcl|Aclame:pro 44 GGVENRPGTRFVGAAKYPNRKCRLIPFQFSTVQTYALEFGH--------------QY-MRVIKDGALVLNSSNVIYEIAT 108 (823) Q Consensus 44 GGl~rRPGt~fva~~~~~~~~~rLipF~~~~~~~Y~l~fg~--------------~~-irV~~~~g~v~~t~~~~~~~~t 108 (823) + .+..++....... ..-+.=.-..++.++..+.+ |+ ++|....+. ....| T Consensus 212 ~-----g~~i~i~a~s~t~--~~~~s~~~~~~~t~~~~~~~~~~~~~~Lp~~~~~G~~v~v~~~~~~----~~~~y---- 276 (785) T protein:vir:94 212 G-----SGFLLITAPSGTD--INSVETEDGYANQLISPVLDTVQTISKLPLAAPNGYIIKIQGETNS----SADEY---- 276 (785) T ss_pred c-----CcEEEEEecCCcc--ccceeeecccCCeEEEEEEeeccceeccccccCCCCEEEEEccCCC----Cccce---- Confidence 2 1222222211100 00000001111222222211 11 011110000 00000 Q ss_pred cccccccceeEEEEeC--cEEEEEeCCceEEEEEEcCCCCceeeeEEEeccccccccccceEEEEecccCCceeeecccc Q lcl|Aclame:pro 109 PYTEADLFRIKFTQSA--DVLTLVHPAYPPKELRRYAHDNWQLVDVVTKNGPFEDINIDESLTVYASASTGTITLTASAS 186 (823) Q Consensus 109 Pyt~~~l~~L~~~qsa--D~~fIvn~~~~p~~l~r~~~~~ws~~~~~f~~~p~~~i~~~~s~t~t~~a~t~~~Tvtas~~ 186 (823) |..-+...-.|...+ ....-.+...-|..|.|.+..+|.+....+..--..+ ..+-..+ T Consensus 277 -~v~~~~~~g~w~e~~~~g~~~~~~~~tmp~~l~~~~~~~~~~~~~~w~~r~~Gd------------------~~tnp~p 337 (785) T protein:vir:94 277 -YVMYDSNTKTWKETVEPGVVTGFDNTTMPHALVRQSDGSFEFKALDWSKRGAGN------------------DDTNPMP 337 (785) T ss_pred -EEEEEcCCceEEEecccceeeeeeccccceEEEeccCCceEEeccccccccCCC------------------cccCCcc Confidence 000000000000000 0111112222233455555554444433322110000 0000000 Q ss_pred ccccccccceEEEcccccceecceeeeeeeeeeeeEEeccceeeeEecccceeecccccCceEEEEeceeccccceEEEE Q lcl|Aclame:pro 187 IFGAEQVGKLFYLEQPAVDSVPVWETSKSTSIGDIRRADSNYYRAVTAGKTGTLRPSHTEGTSWDGWGGSGDDDTGIEWE 266 (823) Q Consensus 187 ~~~a~~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (823) .|...- +.....+...+.. .. +...|- .... ...+ T Consensus 338 sf~g~~-------------------------~~~v~f~q~RL~f--~~-----------~~~v~~---Srtg----d~~n 372 (785) T protein:vir:94 338 SFVDAT-------------------------INDVFFYRNRLGF--LS-----------GENVIM---SRSA----SYFA 372 (785) T ss_pred eecccc-------------------------cceEEEEeceEEE--ec-----------CCeEEE---EccC----Cccc Confidence 010000 0000000011000 00 000010 0000 0000 Q ss_pred EEecCccEEEEEEecCccccccEEEEeeccccccccCcceecccCcccCCCCccEEEEEeceEEEEeCcCCCcEEEEEcc Q lcl|Aclame:pro 267 YLHSGFGIARITAVNGTTATAEVISYIPSQVVGEDNASYKWAKYAWNSVNGYPGTVVYYQQRLYFAASTAFPQTIWASRT 346 (823) Q Consensus 267 ~~~~~~g~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~w~~~~g~Ps~v~f~q~RL~f~~~~~~p~~V~~Sr~ 346 (823) +. .-++. .....+.+... +. ++.-.-...+-.++.-|++..... |. .+|.. T Consensus 373 F~-------~~t~~--~~~DdD~i~~~---~~--------------~~~~~~i~~~v~~~~~L~l~T~~~--e~-~l~~~ 423 (785) T protein:vir:94 373 FF-------PKSVA--TLSDDDPIDVA---VS--------------HPRISILKYAVPFSEQLLLWSDEV--QF-VMTSS 423 (785) T ss_pred Cc-------ccccc--CCCCCccEEEE---ec--------------CCcceeeEEEeecCCcEEEEecCc--EE-EEcCC Confidence 00 00000 00000000000 00 000001122333433344333221 12 22221 Q ss_pred cCcccccccccCCCCCcEEEEEcCCCceEEEEEeecCcEEEEecCcEE------EEecCCCccccccceEEEEeecc-c- Q lcl|Aclame:pro 347 GDYKDFGKSNPTQDDDRIIYTYAGRQVNEIRHLIDVGSLVALTSGGEY------VITGDQNKVLTPSSFAFSSQGSN-G- 418 (823) Q Consensus 347 gdy~nF~~~t~~~DdD~I~~~~~~~~~~~i~~~v~~~~Ll~~t~~~q~------~l~~~~~~~lTP~~~~i~~~s~~-g- 418 (823) + =+.+++. .|.....-.-.+.++=+.-.+.++.....+.| ......++.-.+..+++.....+ | T Consensus 424 -~--~lTP~~~-----~~~~~s~~~~~~~~~Pv~vg~~v~f~~~~g~~~~v~r~~~~~~~~d~y~~~dlt~~~~~~~~g~ 495 (785) T protein:vir:94 424 -G--VLTSKSI-----QLDVGSEFALGDNARPFAVGRSVFFSAPRGSFTSIKRYFAVADVSDVKDADDTTGHVLSYIPNG 495 (785) T ss_pred -C--cccceeE-----EEEEEEeeeccCCCCceEeCCeEEEEecCCCeeEEEeeeeecccccceehhhHHHHHHHhcCCC Confidence 1 0222211 01111110011112222223344444444432 22111112222222211000001 0 Q ss_pred Ccc-cccEEeCCeEEEEecCCCEEEEEEeeccccceeecchHHHHHHhcCCCc-eEEEEEcCCCcEEEEEEeCCCeEEEE Q lcl|Aclame:pro 419 SSN-VPPIAVANIALFVQEKGSVVRDLAYSFDVDGYQGNDLTILANHLFQKHS-IVDWCFSIVPYSSAFCIRDDGKLLVM 496 (823) Q Consensus 419 ~~~-~~Pv~vg~~v~f~~~~g~~v~e~~~~~~~d~~~~~dlt~~~~hl~~~~~-~~~~a~~~~p~~~~~~~~~dg~l~~~ 496 (823) .-. +-=..-...+++..+....+.-+.|-.... -+++..-+.|-+.+.. +...++ ..+.+.++++..+..+.. T Consensus 496 ~~~~~a~~~~~~~~~~~~~~~g~l~~~~y~~~~~---e~~v~aW~r~~~~~~~~~~~~~~--~~d~~~~vv~r~~g~~~~ 570 (785) T protein:vir:94 496 VFDIQGTGTENYICVNSTGAYNRIYIYKFLFKDS---VQLQASWSHWEFPKDDKILASAS--IGSTMFIVRQHQGGVDIE 570 (785) T ss_pred cEEEEEecCCCcEEEEEEcCCCEEEEEEEeecCC---ceEEEEEEEEEeCCCeEEEEEEE--eCCEEEEEEEcCCCEEEE Confidence 000 000011234556655556676666642211 1222344555554432 222222 223332233333322211 Q ss_pred EEeccccceeEEeeccCCceEEEEEEecCCCCEEEEEEEecCCCcEEEEEEeeccccCCcccceeEeeeeeEEeccccce Q lcl|Aclame:pro 497 TYLRDQQVFAWAPQSSTGKYESTCSISEGNEDAVYFVVNRTVNGQTVRYIERLSSRLFTSDEDAFFVDSGLSYDGRNTSD 576 (823) Q Consensus 497 ty~~~q~v~aW~~w~~~g~~~~~~~~~~~~~d~l~~~v~r~~~g~~~~~~e~~~~~~~~~~~~~~~lD~~~~y~~~~~~~ 576 (823) .....+ ...++.+ ..+.+ ||..... +...+.+|+...... T Consensus 571 ~ie~~~-----~~~d~~~-----------~~~~~--------------~lD~~~~----------~~~~~~~~~~~~~~t 610 (785) T protein:vir:94 571 HLKFIK-----EATDFPS-----------EPYRL--------------HVDSKVS----------MVIPIGSFNADTYKT 610 (785) T ss_pred EEEeec-----ccCCCCC-----------cceeE--------------EeeeeeE----------EEecCcceecccccc Confidence 111000 0000000 01111 1111110 001111222111110 Q ss_pred eeeEeeccccCcCccCcceEEe-cCCeEEccccc-c--cEEEec--ccCceeEeeeEEEEEEEEeeEEecCCCceeeEe- Q lcl|Aclame:pro 577 RTMTITGGSGEWDYLAEYTISV-SGGAYFTSSDV-G--AQLQFP--YTGADPDTGYEVSKELRCDIISVTSNTAVVVRA- 649 (823) Q Consensus 577 ~~~~~~~~~~~l~~~~~~~v~~-~dg~~~~~~~v-g--g~i~l~--~~~~~~~vG~~~~~~~~~~~~~~~~~~~~~~~~- 649 (823) . ..+...-.++.|++|++|.+ +||.+++...+ . +.++++ ++++.++||++|+++++++++.+..+++..... T Consensus 611 ~-~~~~~~~~g~~~leg~~v~v~adG~~~~~~~v~~~~~tl~~~g~~~~~~v~vGl~y~~~~~~~~~~~~~~~~~~~~~~ 689 (785) T protein:vir:94 611 T-VDIGAAYGGNAPSPGRYYLIDSQGAYLDLGELTSISTVITLNGDWSGRTVFIGRSYLMSYKFSRFLIKIEDDSGTQSE 689 (785) T ss_pred c-cccccccccCCccCCeEEEEeeCCcCccCceEcCCCcEEEecCCCCCceEEEeeeeeEEEeecceeEEecCCCccccc Confidence 0 01111113689999999987 89998876655 3 355555 789999999999999999999987655322111 Q ss_pred --cc--e--eeeeeeeeeeecccccceeeecccccccceEEEEeCCceeCCEEEcCCEEEecC--CCcEEEECcccceEE Q lcl|Aclame:pro 650 --NR--N--VPPSLRNVATTNWQMARRTFGGLSHLEGQTVNILSDANVEPQKVVSGGAVTLES--PGAVVHIGLPITAEF 721 (823) Q Consensus 650 --~~--~--v~~~~~~~~~~~~g~~~~~~~gl~~l~g~~v~v~~dg~~~~~~~v~~g~itl~~--~~~~~~~gl~~~~~~ 721 (823) .| . +...+.++...........-.-...++++.+. ....+......|.+++|- .+....+ -+.++ T Consensus 690 ~~gr~~l~r~~~~~~~sg~~~v~v~~~~~~~~~~~~~~~~g----~~~~~~~~~~tg~~~vp~~g~~~~~~v--~i~~~- 762 (785) T protein:vir:94 690 DTGRLQLRRAWVNYRDTGALRLIVRNGEREFVNTFNGYTLG----QQTIGTTNIGDGQYRFAMNGNALTTSL--TLESD- 762 (785) T ss_pred ccccEEEEEEEEEeecccceEEEecCCCccceeeecCcccC----cccccccccccceEEEEeecccceEEE--EEEEC- Confidence 11 1 11122222211111110000112334444332 122221122235555553 2333333 33333 Q ss_pred EEcceecC---CCCcccccceeE Q lcl|Aclame:pro 722 ETLDININ---GQETLLDKKQVI 741 (823) Q Consensus 722 ~~l~~~~~---~~~~~~~~~~~i 741 (823) .+||+.+- ..|.-.-|.||| T Consensus 763 ~P~P~tvlsi~~eg~y~~r~~~v 785 (785) T protein:vir:94 763 YPTPVSIVGCGWEASYAKKARSV 785 (785) T ss_pred CCCceEEEEEEEEEEEeccccCC Confidence 55666543 235556677777 No 50 >protein:vir:2109 Length: 472 # NCBI annotation: head completion protein # Family: family:all:1540 # MgeID: mge:46 # MgeName: P22 # Cross-refs: genbank:acc:NP_059633;genbank:gi:9635541;genbank:GeneID:1262840 Probab=55.67 E-value=0.47 Score=22.36 Aligned_cols=416 Identities=14% Similarity=0.088 Sum_probs=135.0 Q ss_pred cccccccccceEEEEecccCCceeeeccccccccccccceEEEcccccceecceeeeeeeeeeeeEEeccceeeeEeccc Q lcl|Aclame:pro 157 GPFEDINIDESLTVYASASTGTITLTASASIFGAEQVGKLFYLEQPAVDSVPVWETSKSTSIGDIRRADSNYYRAVTAGK 236 (823) Q Consensus 157 ~p~~~i~~~~s~t~t~~a~t~~~Tvtas~~~~~a~~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (823) -| ....+-..|...-+..+++.....++ ..+. .......+.......+-...+.. T Consensus 1 m~----------~~q~Pl~~g~~~~~~~~d~~~~~pVN-----------~~a~-~~~~~~s~~~lr~tPG~~~~~~~--- 55 (472) T protein:vir:21 1 MP----------IQQLPMMKGMGKDFKNADYIDYLPVN-----------MLAT-PKEILNSSGYLRSFPGITKRYDM--- 55 (472) T ss_pred Cc----------eEEeeccccccccccccceeeeeeee-----------eeee-ccCCcccceeeeecCCcceeccC--- Confidence 00 00000000000000111111111110 0000 00000000000000010000000 Q ss_pred ceeecccc--c-CceEEEEeceeccccceEEEEEEecCccEEEEEEecCccccccEEEEeeccc---cccccCc------ Q lcl|Aclame:pro 237 TGTLRPSH--T-EGTSWDGWGGSGDDDTGIEWEYLHSGFGIARITAVNGTTATAEVISYIPSQV---VGEDNAS------ 304 (823) Q Consensus 237 t~~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~~~~~~~~~~~~~~~~~---~~~~~~t------ 304 (823) .+....-+ + .+.-+.+ .+...+++++--+.+...+.++...... +...... T Consensus 56 ~g~~RG~~~~t~~~~ly~V-----------------~G~~LY~v~~~~G~i~gsgrVsMa~n~~~~~v~~~~~~~~Y~~~ 118 (472) T protein:vir:21 56 NGVSRGVEYNTAQNAVYRV-----------------CGGKLYKGESEVGDVAGSGRVSMAHGRTSQAVGVNGQLVEYRYD 118 (472) T ss_pred CCceeeeeecccCCeEEEE-----------------eCCceEEEeeeeeeecccccEEEeeCCeEEEEEECCceeEEEEe Confidence 00000000 0 0111100 1112222221111111111111111000 0000001 Q ss_pred -ceecccCcccCCCCcc-------EEEEEeceEEEEeCcCCCcEEEEEcccCcccccccccCCCCCcEE---EEEcCCCc Q lcl|Aclame:pro 305 -YKWAKYAWNSVNGYPG-------TVVYYQQRLYFAASTAFPQTIWASRTGDYKDFGKSNPTQDDDRII---YTYAGRQV 373 (823) Q Consensus 305 -~~~~~~~w~~~~g~Ps-------~v~f~q~RL~f~~~~~~p~~V~~Sr~gdy~nF~~~t~~~DdD~I~---~~~~~~~~ 373 (823) ..+....|-+-.+||. .|+|+..|++|.-.- -+.++.|-.-| +.+|.. ++-+..++ T Consensus 119 ~~~~t~~~~~~d~~f~~~dl~~~~dv~f~dGyfV~~~~g--t~~f~is~l~d-----------~~~~~~y~~FatAE~~p 185 (472) T protein:vir:21 119 GTVKTVSNWPADSGFTQYELGSVRDITRLRGRYAWSKDG--TDSWFITDLED-----------ESHPDRYSAQYRAESQP 185 (472) T ss_pred cchhhhhcccCccccccccccceeEEEEecceEEEccCC--cceeEEecCCC-----------CccccCCccceeeccCC Confidence 1111223333334554 588999997764211 11233332222 222322 45677788 Q ss_pred eEEEEEeecC-cEEEEecCcE--EEEecCCCccccccceEEEEee----cccCcc-cccEEeCCeEEEEecCCC---EEE Q lcl|Aclame:pro 374 NEIRHLIDVG-SLVALTSGGE--YVITGDQNKVLTPSSFAFSSQG----SNGSSN-VPPIAVANIALFVQEKGS---VVR 442 (823) Q Consensus 374 ~~i~~~v~~~-~Ll~~t~~~q--~~l~~~~~~~lTP~~~~i~~~s----~~g~~~-~~Pv~vg~~v~f~~~~g~---~v~ 442 (823) +.|.-++..+ .|++|.+..- |..+|+. ++..+-+.++. ..||.. -.=..+|++++|+...+. .|+ T Consensus 186 D~Iv~i~~~~~~l~lfG~~TiEvw~ntG~a----d~~~fpy~r~~g~~iq~Gcaa~~sv~~~~~s~~~l~~~~~g~~~V~ 261 (472) T protein:vir:21 186 DGIIGIGTWRDFIVCFGSSTIEYFSLTGAT----TAGAALYVAQPSLMVQKGIAGTYCKTPFADSYAFISHPATGAPSVY 261 (472) T ss_pred CceEEEEeeccEEEEEeccceEEEEecCCC----CcCcCceEEcCcceeeecccCcchhhecCceEEEEecCCCcccEEE Confidence 8888888875 6888877755 7777653 23334455554 578854 334678999999988874 343 Q ss_pred EEEeeccccceeecchHH-HHHHhcCCC------ceEEEEEcCCCcEEEEEEeCCCeEEEEEEeccccceeEEeeccCCc Q lcl|Aclame:pro 443 DLAYSFDVDGYQGNDLTI-LANHLFQKH------SIVDWCFSIVPYSSAFCIRDDGKLLVMTYLRDQQVFAWAPQSSTGK 515 (823) Q Consensus 443 e~~~~~~~d~~~~~dlt~-~~~hl~~~~------~~~~~a~~~~p~~~~~~~~~dg~l~~~ty~~~q~v~aW~~w~~~g~ 515 (823) .+ ++|+++=+|- -++..++.. ......|+.+.+.+..+...+. -++|---..|.---||.-+.++. T Consensus 262 ~~------~g~qa~rIST~aIE~~i~~y~~~e~~~A~~~t~~~eGH~fy~LtfP~~-Tw~yD~at~~~~e~W~~~~sg~~ 334 (472) T protein:vir:21 262 II------GSGQASPIATASIEKIIRSYTAEEMATGVMETLRFDSHELLIIHLPRH-VLVYDASSSQNGPQWCVLKTGLY 334 (472) T ss_pred Ec------cCceeEEecCHHHHHHHHhcCCccccceEEEEEEeCCeEEEEEEcCCe-eEEEEcccCccCceeeeeccCCC Confidence 33 4666666642 223333322 2445667777777777666654 22332222232223888777532 Q ss_pred ---eEEEEEEecC--------CCCEEEEEEEecCCCcEEEEEEeeccccCCcccceeEeeeeeEEeccccceeeeEeecc Q lcl|Aclame:pro 516 ---YESTCSISEG--------NEDAVYFVVNRTVNGQTVRYIERLSSRLFTSDEDAFFVDSGLSYDGRNTSDRTMTITGG 584 (823) Q Consensus 516 ---~~~~~~~~~~--------~~d~l~~~v~r~~~g~~~~~~e~~~~~~~~~~~~~~~lD~~~~y~~~~~~~~~~~~~~~ 584 (823) ...++++... .+..||.+--.... ..-.-.|++.....-..+.+-++|--+.- ..+ T Consensus 335 ~~~~R~~~~~~~~g~~ivGD~~nG~ly~L~fd~~~-~~d~~~~~~r~~p~~~~dn~R~fd~eve~------------~~G 401 (472) T protein:vir:21 335 DDVYRGVDFMYEGNQITCGDKSEAVVGQLQFDISS-QYDKQQEHLLFTPLFKADNARCFDLEVES------------STG 401 (472) T ss_pred cCceeEEEEEeeCCeEEEEEcCCCeEEEEEecccc-cCCCcCcEEEEccceeCCCCEEEEEeeec------------cCC Confidence 4455555322 22345544111000 00011122221111111111122211111 110 Q ss_pred ccCcCccCcceEEe---cCCeEEcccccccEEEecccCceeEeeeEEEEEEEEeeEEecCCC-ceeeEecceeeeeeeee Q lcl|Aclame:pro 585 SGEWDYLAEYTISV---SGGAYFTSSDVGAQLQFPYTGADPDTGYEVSKELRCDIISVTSNT-AVVVRANRNVPPSLRNV 660 (823) Q Consensus 585 ~~~l~~~~~~~v~~---~dg~~~~~~~vgg~i~l~~~~~~~~vG~~~~~~~~~~~~~~~~~~-~~~~~~~~~v~~~~~~~ 660 (823) -...+. -|.+ .||..+.... .|.+..+.. |.+++++...--.... +-..+.-..++..+..+ T Consensus 402 ---v~q~~d-~v~L~wSddG~~~~~~~---~~~~g~~g~-------~~tr~~~~RlG~~r~~v~f~~r~~~~~~~~l~g~ 467 (472) T protein:vir:21 402 ---VAQYAD-RLFLSATTDGINYGREQ---MIEQNEPFV-------YDKRVLWKRVGRIRRLIGFKLRVITKSPVTLSGC 467 (472) T ss_pred ---CCCcCc-EEEEEeeccccccccce---eeccCCccc-------hhcceeeeeeeecccceeEEEEEEecCcceeeee Confidence 011111 1111 2222221110 011111100 0011111100000000 00000000000001000 Q ss_pred eeeccc Q lcl|Aclame:pro 661 ATTNWQ 666 (823) Q Consensus 661 ~~~~~g 666 (823) ..-- . T Consensus 468 ~~~~-E 472 (472) T protein:vir:21 468 QIRL-E 472 (472) T ss_pred EEee-C Confidence 0000 0 No 51 >protein:vir:103341 Length: 806 # NCBI annotation: tail tubular protein B-like protein # Family: family:all:825 # MgeID: mge:1609 # MgeName: Era103 # Cross-refs: genbank:acc:YP_001039670;genbank:gi:125999999;genbank:GeneID:4818417 Probab=48.13 E-value=0.68 Score=21.50 Aligned_cols=649 Identities=10% Similarity=0.032 Sum_probs=180.0 Q ss_pred Cceeeeecccccccccccc---cccchHHH--HHHHHhhhhcceeee----cCCceecCcceeeeeec-----CC----- Q lcl|Aclame:pro 1 MAISWIQPSFAGGEIGPSL---YGRIDMAK--YQVALRKCDNFIVRQ----YGGVENRPGTRFVGAAK-----YP----- 61 (823) Q Consensus 1 M~~~~~q~sF~~GElsP~l---~~r~Dl~r--y~~q~~~~~N~~~~~----~GGl~rRPGt~fva~~~-----~~----- 61 (823) -........|..|.-.-.+ ..+-++.. ..++.+...+.-+.. ..+--.|.-++++-..+ +. T Consensus 57 ~~~~~~~~~~~~~~~~~~y~v~~~~g~i~v~~~~~G~~~~v~~~~~~~~yl~~~~~~~~~l~~~tvaD~tfi~n~~~~~~ 136 (806) T protein:vir:10 57 LDANSLIHHYKRGDDAEEYFVILQPGQVPVIFTVGGLACPVNTQGSAATYLSSSSLPRETTQLMTIGDYTFVLNRKMPVQ 136 (806) T ss_pred CCccceEEEEEecCCceEEEEEEcCCcEEEEEcCCCcEEEecCCCceEEEeccCCCCcceeeEEEEcCEEEEecCcEeee Confidence 0000000111111000000 00001100 011222222211110 00111222233321110 00 Q ss_pred -------CCCceEEEEEECC--CCeEEEEEeCCeEEEE--ECCceEeeccccceEEeccc-----------cccccceeE Q lcl|Aclame:pro 62 -------NRKCRLIPFQFST--VQTYALEFGHQYMRVI--KDGALVLNSSNVIYEIATPY-----------TEADLFRIK 119 (823) Q Consensus 62 -------~~~~rLipF~~~~--~~~Y~l~fg~~~irV~--~~~g~v~~t~~~~~~~~tPy-----------t~~~l~~L~ 119 (823) +...+-+-|.+.. +..|.+.+. +..... ...+. .........+.| ..+.+..+. T Consensus 137 ~~~~~~~~~~~~~~v~v~~g~y~~~y~i~In-g~~~a~~~t~~~~---~~~~~~~~~~~~~a~~l~~~l~~~~~~~~~~~ 212 (806) T protein:vir:10 137 ARGDVTPSLDNKGLVYVAYANFSFTYQILIN-GQVAAEHKTASSE---DVKNEDLVRTDYVAGKLLENFNSRTASFPGFS 212 (806) T ss_pred ecccccCCCCcceEEEEeecccCceeeEEec-cceEEEEEeccCC---CcccccccchhHHHHHHHhhhcccccccceeE Confidence 0011111111110 011222221 111100 00000 000000011111 112345678 Q ss_pred EEEeCcEEEEEeCCceEEEEE-EcCCCCceeeeEEEeccccccccccceEEEEecccCCceeeeccccccccccccceEE Q lcl|Aclame:pro 120 FTQSADVLTLVHPAYPPKELR-RYAHDNWQLVDVVTKNGPFEDINIDESLTVYASASTGTITLTASASIFGAEQVGKLFY 198 (823) Q Consensus 120 ~~qsaD~~fIvn~~~~p~~l~-r~~~~~ws~~~~~f~~~p~~~i~~~~s~t~t~~a~t~~~Tvtas~~~~~a~~vg~~~~ 198 (823) +.+.+++++|.+++.++.++. +.+.++|.+..+........+.... .+.+ ....++++....... ...+ T Consensus 213 ~~~~g~~~~i~~~~~~~~~~~~~~g~~~~~~~~~~~~v~~~~~lp~~-----~~~g--~~v~i~~~~~~~~~~---y~v~ 282 (806) T protein:vir:10 213 MYQDGNVLVVDNSNGANYALTTVDGADGQDLVAIRHKVTNLDTLPNR-----APVG--YKVQVWPTGSKPESR---YWLQ 282 (806) T ss_pred EEEcccEEEEecCCCCccEEEEeeCCCCceeEEeecccCccccCccc-----cCCC--cEEEEeccCCCCCCc---eEEE Confidence 899999999999999999886 5677888776654432211111000 0000 011111111000000 0000 Q ss_pred Ecccccceecceeeeeeeee-eeeEEeccceeeeEe-------cccceeecccccCceEEEEeceecccc---------- Q lcl|Aclame:pro 199 LEQPAVDSVPVWETSKSTSI-GDIRRADSNYYRAVT-------AGKTGTLRPSHTEGTSWDGWGGSGDDD---------- 260 (823) Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-------~~~t~~~~~~~~~~~~~~~~~~~~~~~---------- 260 (823) .... ......|........ ..... .+...... ...+..+.. ..|..- ..+.++ T Consensus 283 ~~~~-~~~~~~w~e~~~~~~~~~~~~--~t~p~~~v~~~~~~~~~~~~~~~~-----~~w~~r-~~Gd~~tn~~psF~~~ 353 (806) T protein:vir:10 283 AESQ-DGSKVTWVETIAPGVRKGWNA--ATMPHVLVRESLNANGSANFTYRP-----GEWEDR-DVGDDLTNDFPSLLND 353 (806) T ss_pred EEee-ccCceEEEeecccccccceec--cccceEEEeeeeeecccceeEEEe-----cccccc-cccccccCccCcccCC Confidence 0000 000011111000000 00000 00000000 000000000 001000 000000 Q ss_pred ---------ceEEEEEEecCccEEEEEEecCccccccEEEEeeccccc-cccCcceecccCcccCCCCccEEEEEeceEE Q lcl|Aclame:pro 261 ---------TGIEWEYLHSGFGIARITAVNGTTATAEVISYIPSQVVG-EDNASYKWAKYAWNSVNGYPGTVVYYQQRLY 330 (823) Q Consensus 261 ---------~~~~~~~~~~~~g~~~~t~~~~~~~~~~~~~~~~~~~~~-~~~~t~~~~~~~w~~~~g~Ps~v~f~q~RL~ 330 (823) .....+..... +..- .-+.+ ++...+.+..... .++...+. ..=++.-.-.+.+..++.-|+ T Consensus 354 ~~~~~it~v~f~q~RL~f~s-~~~v---~~Srs--gd~~nF~~~t~~~~~DdD~I~~--~~ss~~~~~i~~~v~~~~~L~ 425 (806) T protein:vir:10 354 SSPQPISSMLMVQNRLMLTS-GEAV---VASRT--SRFFDFFRYTVLATVDTDPFDV--FADIEEVYNIRWSAQMDGDVV 425 (806) T ss_pred CCCccceEEEEEeeeEEEec-CCeE---EEEcc--CCcccCccccccCCCCCccEEE--EEcCCcceeeeeeeecCCcEE Confidence 00001110100 0000 00111 1111111111000 00000110 000111111233344544454 Q ss_pred EEeCcCCCcEEEEEcccCcccccccccCCCCCcEEEEEcCCCceEEEEEeecCcEEEEecCcEE----EEecC-CCcccc Q lcl|Aclame:pro 331 FAASTAFPQTIWASRTGDYKDFGKSNPTQDDDRIIYTYAGRQVNEIRHLIDVGSLVALTSGGEY----VITGD-QNKVLT 405 (823) Q Consensus 331 f~~~~~~p~~V~~Sr~gdy~nF~~~t~~~DdD~I~~~~~~~~~~~i~~~v~~~~Ll~~t~~~q~----~l~~~-~~~~lT 405 (823) +..... | ..+|-.+ =+.+++. .|.....-.-.+.++=+.-.+.++.....+.| -+..+ ..+. T Consensus 426 l~t~~~--q-~~l~~~~---~lTP~~~-----~~~~~s~~~~~~~~~Pv~vG~~v~Fv~~~g~~s~vre~~y~~~~d~-- 492 (806) T protein:vir:10 426 LFTSDQ--Q-FTLPGDK---PLTPTSA-----VIRPVTQFKMTPGVKPAPSGDSILFAFDQGSYSGIREFFTDSYSDT-- 492 (806) T ss_pred EEecCc--E-EEEeCCC---cccceeE-----EEEEEEeecccCCCCceEeCCeEEEeeCCCCeeEEEEEEeeeeccc-- Confidence 444332 2 2223211 1222210 01111110101122222223344444444433 11111 1111 Q ss_pred ccceEEEEeec--ccCc--ccccE-EeCCeEEEEecCCCEEEEEEeeccccceeecchHHHHHHhcCCCceEEEEEcCCC Q lcl|Aclame:pro 406 PSSFAFSSQGS--NGSS--NVPPI-AVANIALFVQEKGSVVRDLAYSFDVDGYQGNDLTILANHLFQKHSIVDWCFSIVP 480 (823) Q Consensus 406 P~~~~i~~~s~--~g~~--~~~Pv-~vg~~v~f~~~~g~~v~e~~~~~~~d~~~~~dlt~~~~hl~~~~~~~~~a~~~~p 480 (823) +....+..... +... ..--. .....+++..+....+.-+.|-.... -+++..-+.|-+.+......+... . T Consensus 493 ~~~~DlT~~~~hl~~g~~~~~~~~~~~~~~~~~~~~~dg~l~~~ty~~~~~---e~~v~aW~rw~~~~~~~~~~~~~~-~ 568 (806) T protein:vir:10 493 KKAQPATSHVDKYIRGKVLELSASSSFNRAFIITSPDRNILYVYDWLYEGT---EKVQNAWHKWSFPAGTVLHAVSYS-N 568 (806) T ss_pred eehhhHHHHHHHhcCCCeEEEEEeCCCCcEEEEEEcCCCEEEEEEEeecCC---ceEEEeEEeeeeCCCeEEEEEEEe-c Confidence 11111111111 1100 00000 11224556666666777766643221 133344455555544333222222 2 Q ss_pred cEEEEEEeCCC---eE--EEEEEeccc---cceeEEeeccCCceEEEEEEecCCCCEEEEEEEecCCCcEEEEEEeeccc Q lcl|Aclame:pro 481 YSSAFCIRDDG---KL--LVMTYLRDQ---QVFAWAPQSSTGKYESTCSISEGNEDAVYFVVNRTVNGQTVRYIERLSSR 552 (823) Q Consensus 481 ~~~~~~~~~dg---~l--~~~ty~~~q---~v~aW~~w~~~g~~~~~~~~~~~~~d~l~~~v~r~~~g~~~~~~e~~~~~ 552 (823) +.+.++++..+ .+ ..+..+... +-..+.++-++-+.. |... .. T Consensus 569 d~l~~vv~R~~~~~g~~~~~iE~~~~~~~~~~~~~~~~~lD~~~~-------------~~~~-~~--------------- 619 (806) T protein:vir:10 569 EKLYLVLTRTNTSGGVAGVYIEVMDMGDELEYGLQDRVRMDRRAT-------------LSMT-YN--------------- 619 (806) T ss_pred CeEEEEEEEcCCcccEEEEEEEeecCCCCCCcccceeeeccccce-------------EEEe-cc--------------- Confidence 33333332222 11 111111111 011222221111000 0000 00 Q ss_pred cCCcccceeEeeeeeEEecc-ccceeeeEeeccccCcCccCcceEEe-cCCeEEcccccccEEEecccCceeEeeeEEEE Q lcl|Aclame:pro 553 LFTSDEDAFFVDSGLSYDGR-NTSDRTMTITGGSGEWDYLAEYTISV-SGGAYFTSSDVGAQLQFPYTGADPDTGYEVSK 630 (823) Q Consensus 553 ~~~~~~~~~~lD~~~~y~~~-~~~~~~~~~~~~~~~l~~~~~~~v~~-~dg~~~~~~~vgg~i~l~~~~~~~~vG~~~~~ 630 (823) ...+ ..-+..+.+-.. ........+ .++.|.+|..+.+ .++.. ..+..+....+..+++++||++|++ T Consensus 620 ---~~~~-~~~~~~l~~~~~~~~~~~~~~~----~g~~~~~g~~~~~~~~~~~--~~v~~~~~~~~~~~~~v~vGl~Y~s 689 (806) T protein:vir:10 620 ---ATTR-VWTSSALPWLPQDLSSLDAVLV----SGWAGYVGGAFQFSYNASN--NTISTNFDLAEGNTATIVVGETYWY 689 (806) T ss_pred ---cccc-ceeeeeeccccccccceeEEEE----eeccccCCceEEEEEcCcc--ceEeeeeeecCCCCcEEEEeeeeeE Confidence 0000 000111111000 000000111 1344556555543 22221 1111222334567889999999999 Q ss_pred EEEEeeEEecCCCceeeE--ecceeeeeeeeeeeecccccceeeecc-cc---cccceEEEEeCCceeCCEEEcCCEEEe Q lcl|Aclame:pro 631 ELRCDIISVTSNTAVVVR--ANRNVPPSLRNVATTNWQMARRTFGGL-SH---LEGQTVNILSDANVEPQKVVSGGAVTL 704 (823) Q Consensus 631 ~~~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~g~~~~~~~gl-~~---l~g~~v~v~~dg~~~~~~~v~~g~itl 704 (823) +++++++.+..+.....+ +.+.....+.................. ++ ..|+..... ....+......|.+++ T Consensus 690 ~~~~t~p~~~~~~~~~~~~~r~~l~r~~~~~~~s~~~~~~v~~~~~~~~~~~~~~~~~~~~~--~~~~g~~~~~tg~~~v 767 (806) T protein:vir:10 690 EVEPTPPLIKDSKDRVSYLDTPTVGNVYLNLDMYPDFSVVVTDKETLQERTVYLANKTAGSI--TNVIGYIAPHEGTLRI 767 (806) T ss_pred EEEECCeeEeccCCCccccccEEEEEEEEEeecceeeEEEEcccCCCcceeeeccCcccccc--cccccccccccceEEE Confidence 999999888665433322 222222222111111111111100000 00 011111000 0111112233466665 Q ss_pred cC--CCcEEEECcccceEEEEcceecCC---CCcccccceeE Q lcl|Aclame:pro 705 ES--PGAVVHIGLPITAEFETLDINING---QETLLDKKQVI 741 (823) Q Consensus 705 ~~--~~~~~~~gl~~~~~~~~l~~~~~~---~~~~~~~~~~i 741 (823) |- .+....+ -+.++ .+||+.+-+ .|.-.-|.+|| T Consensus 768 p~~~~~~~~~v--~i~~d-~P~P~tvlai~~eg~y~~r~~rv 806 (806) T protein:vir:10 768 PLRRKSTDVSF--KIRSK-SPATFQLRDIEWTGSYNPRKRRV 806 (806) T ss_pred EeeecCceeEE--EEEEC-CCCceEEEEEEEEEEeecccccC Confidence 53 2333333 23333 556655432 35566677777 No 52 >protein:vir:6326 Length: 826 # NCBI annotation: tail tubular protein B # Family: family:all:825 # MgeID: mge:132 # MgeName: phiKMV # Cross-refs: genbank:acc:NP_877473;genbank:gi:33300845;uniprot:Q7Y2D1;genbank:GeneID:1482615 Probab=36.62 E-value=1.2 Score=20.22 Aligned_cols=644 Identities=10% Similarity=0.014 Sum_probs=185.8 Q ss_pred Cceeeee---ccc-ccccccccccccchHHHHHHHHhhhhcceeee-cCCceecCcceeeee-------------ec--- Q lcl|Aclame:pro 1 MAISWIQ---PSF-AGGEIGPSLYGRIDMAKYQVALRKCDNFIVRQ-YGGVENRPGTRFVGA-------------AK--- 59 (823) Q Consensus 1 M~~~~~q---~sF-~~GElsP~l~~r~Dl~ry~~q~~~~~N~~~~~-~GGl~rRPGt~fva~-------------~~--- 59 (823) =.++.+| ..| ..++.-|.+... ++.++... .+.+... .|...|+=...+... .. T Consensus 114 ~~l~~~t~aD~~fi~n~~~~p~~~~~-~~~~~~~~----~~~~~~v~~g~Y~~~y~vti~~~~~~~gt~~s~t~t~~t~~ 188 (826) T protein:vir:63 114 RQLRAATVADDLFIANLSVKPEADRT-DIKGVDPN----KAGWLYIKAGQYSKAFSMTIKVKDNATGTTYSHTATYVTPD 188 (826) T ss_pred cceEEEEeCCEEEEEeCCeeeeeccc-cccccCCC----CcEEEEeeccccCceEEEEEEeccccCCccccceEEEEecc Confidence 0022222 122 334444433111 12222111 1111111 111111100000000 00 Q ss_pred CCCCCceEEEEEECCCCeEEEEEeCCeEEEEECCceEeeccccceEEecccccccc----ceeEEEEeCcEEEEEeCCce Q lcl|Aclame:pro 60 YPNRKCRLIPFQFSTVQTYALEFGHQYMRVIKDGALVLNSSNVIYEIATPYTEADL----FRIKFTQSADVLTLVHPAYP 135 (823) Q Consensus 60 ~~~~~~rLipF~~~~~~~Y~l~fg~~~irV~~~~g~v~~t~~~~~~~~tPyt~~~l----~~L~~~qsaD~~fIvn~~~~ 135 (823) .......+....+.....|+..= .+-..+....... ..+...+-.+++..... ..-.....+.++++...... T Consensus 189 ~~~a~~~~~~~~~~~s~~yia~~--l~~~~~a~~~~~~-~~~t~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (826) T protein:vir:63 189 NASTNPNLAEAPFQTSVGYIAWQ--LYGKFFGAPEYTL-PNSTKKYPKVDPDANAATIAGYLNQRGVQDGYIAFRGDADI 265 (826) T ss_pred CCcccccccccceeeeeeeeeee--ceeeeeecccccc-CCCccccceecCCcccceeecceeEecccccEEEEeeCCcc Confidence 00000001000000011111100 0000011000000 00111111111111110 00111223456666666655 Q ss_pred EEEEEEcCCCCceeeeEEEeccccccccccceEEEEecccCCceeeeccc-cccccccccceEEEcccccceecceeeee Q lcl|Aclame:pro 136 PKELRRYAHDNWQLVDVVTKNGPFEDINIDESLTVYASASTGTITLTASA-SIFGAEQVGKLFYLEQPAVDSVPVWETSK 214 (823) Q Consensus 136 p~~l~r~~~~~ws~~~~~f~~~p~~~i~~~~s~t~t~~a~t~~~Tvtas~-~~~~a~~vg~~~~~~~~~~~~~~~~~~~~ 214 (823) ...+...+...|.+...........+..... +.....++...... ............++..... ...|.... T Consensus 266 ~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~-----p~~~~~~~~~~~~~~~~~~~g~~~d~~y~~~~~~--~~~w~e~~ 338 (826) T protein:vir:63 266 HVEVSTDMGNNYGIASGGMSLNATADLPALL-----PGVGAPGVGVQFMDGAVMATGSTKAPVYFEWDSA--NRRWAERA 338 (826) T ss_pred cEEEccCCCCcceEEEEEeeccceeeccccC-----CCcccceEEEeeEEeEEecCCCcccceEEEEEcC--CceEEEEe Confidence 5566666666776654432222111111100 00000000000000 0000000000011111000 01122111 Q ss_pred eeeeeeeEEeccceeeeEe---cccceeecccccCc-eEEEE-------eceecccc-ceEEEEEEecCccEEEEEEecC Q lcl|Aclame:pro 215 STSIGDIRRADSNYYRAVT---AGKTGTLRPSHTEG-TSWDG-------WGGSGDDD-TGIEWEYLHSGFGIARITAVNG 282 (823) Q Consensus 215 ~~~~~~~~~~~~~~~~~~~---~~~t~~~~~~~~~~-~~~~~-------~~~~~~~~-~~~~~~~~~~~~g~~~~t~~~~ 282 (823) ..... ....+...... ...+..+.+..... ...+. ..+..... .....+..... +. +..-+ T Consensus 339 ~~~~~---~~~~tmp~~l~~~~~~~~f~~~~~~w~~r~~Gd~~tnp~psf~g~~~~~v~f~q~RL~f~~-~~---~v~~S 411 (826) T protein:vir:63 339 AYGTD---WVLKKMPLALRWDEATDTYSLNELEYDRRGSGDEDTNPTFNFVTRGITGMTTFQGRLVLLS-QE---YVCMS 411 (826) T ss_pred ecCcc---cccccceEEEEEeccCCeEEEeccccccccccccccCCCccccCCCceEEEEEeceEEEee-CC---eEEEE Confidence 11000 00000000000 00011111110000 00000 00000000 00111111110 00 00011 Q ss_pred ccccccEEEEeecccc-ccccCcceecccCcccCCCCccEEEEEeceEEEEeCcCCCcEEEEEcccCcccccccccCCCC Q lcl|Aclame:pro 283 TTATAEVISYIPSQVV-GEDNASYKWAKYAWNSVNGYPGTVVYYQQRLYFAASTAFPQTIWASRTGDYKDFGKSNPTQDD 361 (823) Q Consensus 283 ~~~~~~~~~~~~~~~~-~~~~~t~~~~~~~w~~~~g~Ps~v~f~q~RL~f~~~~~~p~~V~~Sr~gdy~nF~~~t~~~Dd 361 (823) .+. +...+.+.... ..++...+.. .=++...-.+.+.-++.-|++..... |. .+|-. + =+.+++ T Consensus 412 rtg--d~~nF~~~s~~~~~DdD~I~~~--~ss~~~~~i~~~v~~~~~L~l~T~~~--q~-~ls~~-~--~lTP~~----- 476 (826) T protein:vir:63 412 ASN--NPHRWFKKSAAALNDDDPIEIA--AQGSLTEPYEHAVTFNKDLIVFAKKY--QA-VVPGG-G--IVTPRT----- 476 (826) T ss_pred ccC--CccccccccccCCCCCccEEEE--EcCCcceeeEEEeecCCcEEEEecCc--EE-EEeCC-C--ccccee----- Confidence 111 11111111110 0011111110 00111111133334544454444332 22 22321 1 122221 Q ss_pred CcEEEEEcCC--CceEEEEEeecCcEEEEecCc-----E--EEEecCCCccccccceEEEEeecc--cCcccccEEeCCe Q lcl|Aclame:pro 362 DRIIYTYAGR--QVNEIRHLIDVGSLVALTSGG-----E--YVITGDQNKVLTPSSFAFSSQGSN--GSSNVPPIAVANI 430 (823) Q Consensus 362 D~I~~~~~~~--~~~~i~~~v~~~~Ll~~t~~~-----q--~~l~~~~~~~lTP~~~~i~~~s~~--g~~~~~Pv~vg~~ 430 (823) |.+...+. -.+.++=+.-.+.++....++ . |....+.++......+++...-.+ +.....=...-+. T Consensus 477 --~~i~~~s~~~~~~~~~Pv~vG~~v~Fv~~~g~~~s~v~e~~~~~d~~~~y~~~dlt~~~~~l~~~~v~~~a~s~~~~~ 554 (826) T protein:vir:63 477 --AVISITTQYDLDTRAAPAVTGRSVYFAAERALGFMGLHEMAPSPSTDSHYVAEDVTSHIPSYMPGPAEYIQAAASSGY 554 (826) T ss_pred --EEEEEEEeecccCCCCceEeCCeEEEEecCCCceeEEEEEEeeeccccceehhHHHHHHHHhcCCCeEEEEEcCCCCE Confidence 11111111 111122222233344333333 2 222221111111111100000000 0000000111234 Q ss_pred EEEEecCCCEEEEEEeeccccceeecchHHHHHHhcCCCceEEEEEcCCCcEEEEEEeCCCeEEEEEEeccccceeEEee Q lcl|Aclame:pro 431 ALFVQEKGSVVRDLAYSFDVDGYQGNDLTILANHLFQKHSIVDWCFSIVPYSSAFCIRDDGKLLVMTYLRDQQVFAWAPQ 510 (823) Q Consensus 431 v~f~~~~g~~v~e~~~~~~~d~~~~~dlt~~~~hl~~~~~~~~~a~~~~p~~~~~~~~~dg~l~~~ty~~~q~v~aW~~w 510 (823) ++|..+.-..+.-+.|-... .-+++.--+.|-+.|. +..+++. .+.+.++++..+..+..+|.-|+.-..+.. T Consensus 555 v~~~~~~dg~l~~~~y~~~~---~e~~v~aW~~~~~~g~-v~~~~~i--~d~l~~iv~r~~~~~~~r~~~e~~~~~~~~- 627 (826) T protein:vir:63 555 LVFGTSTADEMICHQYLWQG---NEKVQNAFHRWTLRHQ-IIGAYFT--GDNLMVLIQKGQEIALGRMHLNSLPAREGL- 627 (826) T ss_pred EEEEEcCCCEEEEEEEeeCC---CcEEEEeEEEEecCCc-EEEEEEE--CCeEEEEEEeCCCEEEEEEEEEecCCcccc- Confidence 56665554556665553211 1133445566777653 5555544 344444555555444444422221111111 Q ss_pred ccCCceEEEEEEecCCCCEEEEEEEecCCCcEEEEEEeeccccCCcccceeEeeeeeEEeccccceeeeEeeccccCcCc Q lcl|Aclame:pro 511 SSTGKYESTCSISEGNEDAVYFVVNRTVNGQTVRYIERLSSRLFTSDEDAFFVDSGLSYDGRNTSDRTMTITGGSGEWDY 590 (823) Q Consensus 511 ~~~g~~~~~~~~~~~~~d~l~~~v~r~~~g~~~~~~e~~~~~~~~~~~~~~~lD~~~~y~~~~~~~~~~~~~~~~~~l~~ 590 (823) +++ .+| .++.+.-. +.....+.....+ .+++| T Consensus 628 ~~~------------~~d-~~~~~d~~-------------------------~~~~~~~~~~~~~----------~~~~~ 659 (826) T protein:vir:63 628 QYP------------KYD-YWRRIEAT-------------------------VAGELELTKQHWD----------LIKDA 659 (826) T ss_pred ccC------------Ccc-ceEEEEEe-------------------------eeeeeccCcceee----------cccCc Confidence 000 001 11111110 0111111111111 03678 Q ss_pred cCcceEEe-cCCeEEccc----cc-ccEEEec----ccCceeEeeeEEEEEEEEeeEEecCCCceeeEecc--e--eeee Q lcl|Aclame:pro 591 LAEYTISV-SGGAYFTSS----DV-GAQLQFP----YTGADPDTGYEVSKELRCDIISVTSNTAVVVRANR--N--VPPS 656 (823) Q Consensus 591 ~~~~~v~~-~dg~~~~~~----~v-gg~i~l~----~~~~~~~vG~~~~~~~~~~~~~~~~~~~~~~~~~~--~--v~~~ 656 (823) +++..+.+ +|+.+.... ++ ++.|+|+ +.+++++||++|+++++++++++..+.+......| . +... T Consensus 660 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~l~~~~~~~~~~v~VGl~y~s~~~~~~~~~~~~~g~~~~~gr~~l~r~~~~ 739 (826) T protein:vir:63 660 SAVYQLQPVAGAYMERTHLGVKRETNTKVFLDVPEAVVGAVYVVGCEFWSKVEFTPPVLRDHNGLPMTSTRAVLHRYNVN 739 (826) T ss_pred ccccEEEEeeCccccCCccceEEecCCEEEEecCCCccccEEEEeeeeeEEEEecceEEEccCCCcceeccEEEEEEEEE Confidence 88888876 777765432 22 6888874 44678999999999999999999765544332222 1 1112 Q ss_pred eeeeeeecccccc--eeeecccccccceEEEEeCCceeCCEEEcCCEEEecCCCcEEEECcccceEEEEcceecC---CC Q lcl|Aclame:pro 657 LRNVATTNWQMAR--RTFGGLSHLEGQTVNILSDANVEPQKVVSGGAVTLESPGAVVHIGLPITAEFETLDININ---GQ 731 (823) Q Consensus 657 ~~~~~~~~~g~~~--~~~~gl~~l~g~~v~v~~dg~~~~~~~v~~g~itl~~~~~~~~~gl~~~~~~~~l~~~~~---~~ 731 (823) +.++......... ....-..+..+..+. .+....+.-.+..|.+.+|-........|.+.++ .+||+.+- .+ T Consensus 740 ~~~tg~~~v~v~~~~~~~~~~~~~~~~~~~--~~~~~~g~p~~~t~~~~vP~~~~~~~~~i~i~~d-~P~p~~il~i~~~ 816 (826) T protein:vir:63 740 FGWTGEFLWRISDTARPNQPWYDTTPLRLF--SRQLNAGEPLVDSAVVPLPARVDMATSKFELSCH-SPYDMNVRAVEYN 816 (826) T ss_pred eeccccEEEEecCccccceeEeecCCceec--ccccccccccccceEEEEEEeeccceEEEEEEeC-CCCcEEEEEEEEE Confidence 2222111111100 000001122222110 0111112222334666666543333333444555 67776653 34 Q ss_pred CcccccceeE Q lcl|Aclame:pro 732 ETLLDKKQVI 741 (823) Q Consensus 732 ~~~~~~~~~i 741 (823) +.-.-|++|| T Consensus 817 ~~yn~r~rrv 826 (826) T protein:vir:63 817 FKSNQTYRRV 826 (826) T ss_pred EEEeceeecC Confidence 6666777887 No 53 >protein:vir:100960 Length: 472 # NCBI annotation: gp10 # Family: family:all:1540 # MgeID: mge:1509 # MgeName: ST104 # Cross-refs: genbank:acc:YP_006412;genbank:gi:46358704;genbank:GeneID:2777110 Probab=35.21 E-value=1.2 Score=20.06 Aligned_cols=415 Identities=14% Similarity=0.130 Sum_probs=133.5 Q ss_pred EEEeccccccccccceEEEEecccCCceeeeccccccccccccceEEEc--ccccceecceeeeeeeeeeeeEEecccee Q lcl|Aclame:pro 152 VVTKNGPFEDINIDESLTVYASASTGTITLTASASIFGAEQVGKLFYLE--QPAVDSVPVWETSKSTSIGDIRRADSNYY 229 (823) Q Consensus 152 ~~f~~~p~~~i~~~~s~t~t~~a~t~~~Tvtas~~~~~a~~vg~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (823) +.....| .+.+.+... ..++.+ ..+-++ ....+... +.+ .. T Consensus 1 m~~~~ip------------l~~g~~~~~--------~~a~~~-~~~pvn~y~~~~~~~~---------------ss~-~L 43 (472) T protein:vir:10 1 MPIQQLP------------MMKGMGKDF--------KNADYI-DYLPINMLATPKEVLN---------------SSG-YL 43 (472) T ss_pred Cceeecc------------cccccccCC--------CcCcce-eeeeeccccccccccc---------------ccc-ce Confidence 1000000 000000000 000000 000000 00000000 000 00 Q ss_pred eeEecccceeecccccCceEEEEeceeccccceEEEEEEecCccEEEEEEecCccccccEEEEeeccc---cccccCc-- Q lcl|Aclame:pro 230 RAVTAGKTGTLRPSHTEGTSWDGWGGSGDDDTGIEWEYLHSGFGIARITAVNGTTATAEVISYIPSQV---VGEDNAS-- 304 (823) Q Consensus 230 ~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~~~~~~~~~~~~~~~~~---~~~~~~t-- 304 (823) ++..+-....-.++...|..+... .+.. +.-.+...++.++.-+.+...+.++...... +...... T Consensus 44 r~~pG~~~~a~~~G~~RG~~~~~~----~~~l-----y~V~G~~Ly~v~~~iG~i~gsgrVsMa~n~~~~~v~~~~~~~~ 114 (472) T protein:vir:10 44 RSFPGIAKRNDVNGVSRGVEYNTA----QNAV-----YRVCGGKLYKGEAVVGDVAGSGRVSMAHGRTSQAVGVNGQLIE 114 (472) T ss_pred eecccceeecCCCCcccceeeeee----CCeE-----EEEeCcceEEEEeeEeeccCcccEEEeeCCeEEEEEECCceeE Confidence 000000000000001111100000 0000 0001111122222111111111111111000 0000000 Q ss_pred -----ceecccCcccCCCCcc-------EEEEEeceEEEEeCcCCCcEEEEEcccCcccccccccCCCCCcEE-EEEcCC Q lcl|Aclame:pro 305 -----YKWAKYAWNSVNGYPG-------TVVYYQQRLYFAASTAFPQTIWASRTGDYKDFGKSNPTQDDDRII-YTYAGR 371 (823) Q Consensus 305 -----~~~~~~~w~~~~g~Ps-------~v~f~q~RL~f~~~~~~p~~V~~Sr~gdy~nF~~~t~~~DdD~I~-~~~~~~ 371 (823) ..+....|-+-.+||. .|+|+..|++|.-. .-+.++.|-..|-+. -|+.+ ++.+.. T Consensus 115 Y~~~~~~~t~~~~~~d~~f~~~dl~~~~dv~f~dGyfV~~~~--gt~~~~iS~l~d~~~---------~~~y~~fa~AE~ 183 (472) T protein:vir:10 115 YRYDGAVKTVSNWPADSGFTQYELGSVRDITRLRGRYAWSKD--GTDSWFITDLEDESH---------PDRYSAEYRAES 183 (472) T ss_pred EEEecchhhhhcccCccccccccccceeEEEEecceEEEccC--CCceEEEeccCCccc---------cccccccccccC Confidence 1111223333334554 58999999877521 112344444333221 12221 455677 Q ss_pred CceEEEEEeecC-cEEEEecCcE--EEEecCCCccccccceEEEEee----cccCcc-cccEEeCCeEEEEecCCC---E Q lcl|Aclame:pro 372 QVNEIRHLIDVG-SLVALTSGGE--YVITGDQNKVLTPSSFAFSSQG----SNGSSN-VPPIAVANIALFVQEKGS---V 440 (823) Q Consensus 372 ~~~~i~~~v~~~-~Ll~~t~~~q--~~l~~~~~~~lTP~~~~i~~~s----~~g~~~-~~Pv~vg~~v~f~~~~g~---~ 440 (823) +++.|.-++..+ .|++|.+..- |..+|+. ++..+-+.++. ..||.. -.=..+|++++|+...+. . T Consensus 184 ~pD~Ivgi~~~~~~l~lfG~~TiEvw~ntG~a----d~~~fpy~r~~g~~i~~Gcaa~~sv~~~~~s~~~l~~~~~g~~~ 259 (472) T protein:vir:10 184 QPDGIIGIGSWRDFIVCFGSSTIEYFSLTGAT----TVGAALYVAQPSLMVQKGIAGTYCKTPFADSYAFISHPATGAPS 259 (472) T ss_pred CCCceEEEEeeccEEEEEeccceEEEEecCCC----CcCcCceEEcCcceeeecccCcchhhecCceEEEEecCCCcccE Confidence 788888888875 6888877755 7777653 22334445554 578854 334678999999988874 3 Q ss_pred EEEEEeeccccceeecchHH-HHHHhcCCC------ceEEEEEcCCCcEEEEEEeCCCeEEEEEEeccccceeEEeeccC Q lcl|Aclame:pro 441 VRDLAYSFDVDGYQGNDLTI-LANHLFQKH------SIVDWCFSIVPYSSAFCIRDDGKLLVMTYLRDQQVFAWAPQSST 513 (823) Q Consensus 441 v~e~~~~~~~d~~~~~dlt~-~~~hl~~~~------~~~~~a~~~~p~~~~~~~~~dg~l~~~ty~~~q~v~aW~~w~~~ 513 (823) |+.+ ++|+++=+|- -++..++.. ......|+.+.+.+..+...+. -++|---.+|.---||.-+.+ T Consensus 260 V~~~------~g~qa~rIST~aIE~~i~~y~~~e~~~A~~~t~~~~GH~fy~LtfP~~-Tw~yD~at~~w~erw~~~~~g 332 (472) T protein:vir:10 260 VYII------GSGQASPIATASIEKIIRSYTAEELATGVMETLRFDSHELLIIHLPRH-VLVYDASSSQNGPQWCVLKTG 332 (472) T ss_pred EEEc------cCceeEEecCHHHHHHHHhcCCccccceEEEEEEeCCeEEEEEEcCCe-eEEEEcccCcccceeeeecCC Confidence 4333 4666666642 223333322 2345666777777766666654 223322122222225555544 Q ss_pred Cc---eEEEEEEecC--------CCCEEEEEEEe--cCCCcEEEEEEeec-cccCCcccceeEeeeeeEE-eccccceee Q lcl|Aclame:pro 514 GK---YESTCSISEG--------NEDAVYFVVNR--TVNGQTVRYIERLS-SRLFTSDEDAFFVDSGLSY-DGRNTSDRT 578 (823) Q Consensus 514 g~---~~~~~~~~~~--------~~d~l~~~v~r--~~~g~~~~~~e~~~-~~~~~~~~~~~~lD~~~~y-~~~~~~~~~ 578 (823) +. ...++++... .+..||.+--. +.+|+.. |++- ...+.. +.+-++|--+.- .|..+ T Consensus 333 ~~~~~~R~~~~~~~~g~~ivGD~~nG~ly~ld~~~~t~~g~~~---~~~~~~p~l~~-dn~R~~d~eve~~~Gv~~---- 404 (472) T protein:vir:10 333 LYDDVYRAVDFMYEGNQITCGDKSEALTGQLQFDISSQYGLQQ---EHLLFTPLFKA-DNARCFDLEVESSTGVAQ---- 404 (472) T ss_pred CcccceeEEEEEeeCCeEEEEEcCCCeEEEEecccCCCCCCcc---cceEEcccccC-CCCEEEEEeeeccCCCCC---- Confidence 22 4444444321 23345544322 2233322 2211 111111 222222321111 11111 Q ss_pred eEeeccccCcCccCcceEEe---cCCeEEcccccccEEEecccCceeEeeeEEEEEEEEeeEEecCCC-ceeeEecceee Q lcl|Aclame:pro 579 MTITGGSGEWDYLAEYTISV---SGGAYFTSSDVGAQLQFPYTGADPDTGYEVSKELRCDIISVTSNT-AVVVRANRNVP 654 (823) Q Consensus 579 ~~~~~~~~~l~~~~~~~v~~---~dg~~~~~~~vgg~i~l~~~~~~~~vG~~~~~~~~~~~~~~~~~~-~~~~~~~~~v~ 654 (823) .+. -|.+ .||..+.... .|.+..+.. |.+++++...--.... +-..+.-..++ T Consensus 405 ------------~~d-~v~L~wSddG~~~~~~~---~~~~g~~g~-------~~tr~~~~RlG~~r~~v~f~~r~~~~~~ 461 (472) T protein:vir:10 405 ------------YAD-RLFLSATTDGINYGREQ---MIEQNEPFV-------YDKRVIWKRVGRIRRLIGFKLRVITKSP 461 (472) T ss_pred ------------cCc-EEEEEeeccccccccce---eeccCCccc-------hhcceeeeeeeecccceeEEEEEEecCc Confidence 111 1111 1222221110 011111000 0011110000000000 00000000000 Q ss_pred eeeeeeeeeccc Q lcl|Aclame:pro 655 PSLRNVATTNWQ 666 (823) Q Consensus 655 ~~~~~~~~~~~g 666 (823) ..+..+..-- . T Consensus 462 ~~l~g~~~~~-E 472 (472) T protein:vir:10 462 VTLSGCQIRL-E 472 (472) T ss_pred ceeeeeEEee-C Confidence 0000000000 0 No 54 >protein:vir:8887 Length: 808 # NCBI annotation: tail tubular protein B # Family: family:all:825 # MgeID: mge:161 # MgeName: gh-1 # Cross-refs: genbank:acc:NP_813776;genbank:gi:29366731;genbank:GeneID:1258831 Probab=30.71 E-value=1.6 Score=19.53 Aligned_cols=650 Identities=11% Similarity=0.062 Sum_probs=178.5 Q ss_pred Ccee------------eeeccc----ccccccccccccchHHHHHHHHhhhhcceeeecCCc------eecCcceeeeee Q lcl|Aclame:pro 1 MAIS------------WIQPSF----AGGEIGPSLYGRIDMAKYQVALRKCDNFIVRQYGGV------ENRPGTRFVGAA 58 (823) Q Consensus 1 M~~~------------~~q~sF----~~GElsP~l~~r~Dl~ry~~q~~~~~N~~~~~~GGl------~rRPGt~fva~~ 58 (823) .-|+ ..|.|| .+| |..|.=.+.. -.+-....++- -.|-..+-.... T Consensus 13 ~GvSqq~d~~R~~~q~~~~~N~~~~~~gG-----~~rRpgt~~v-------~~l~~~~~~~~~~~~~~~~~~~~~~y~v~ 80 (808) T protein:vir:88 13 GGISQQPDILRFSNQGALQINGWSSETQG-----LQKRPPTTFT-------KRLQNKGFLGTKPLVHLINRDAQEQYFVG 80 (808) T ss_pred cceeccchhHhhhhhhhhhhcceeeeccc-----cccCCchhee-------eeeeccCCCCCCcEEEEEEeCcCceEEEE Confidence 0000 001111 222 2223221110 00000000000 001100000000 Q ss_pred cCCCCCceEEEEEECCCCeEEEEEeCCeEEE---------EECCce--Eeeccccce------EEecccccc-ccceeEE Q lcl|Aclame:pro 59 KYPNRKCRLIPFQFSTVQTYALEFGHQYMRV---------IKDGAL--VLNSSNVIY------EIATPYTEA-DLFRIKF 120 (823) Q Consensus 59 ~~~~~~~rLipF~~~~~~~Y~l~fg~~~irV---------~~~~g~--v~~t~~~~~------~~~tPyt~~-~l~~L~~ 120 (823) .. +...|++ .. .+..++++..+.|+.. ...... +++..-.+. ....|-+.. .+-.++- T Consensus 81 ~~-~~~i~v~--~~-~G~~~~v~~~~~y~~~~~~~~~l~~~tvaD~~fi~n~~~~~~~~~~~~~~~~~~~~~~~~~~vr~ 156 (808) T protein:vir:88 81 FS-GTGLAVW--DL-KGNNYTVRGYNGYANCANPRTDLRLITVADYTFVVNRNTVCQMGSTLTHAAYPRLDGRAIINVRG 156 (808) T ss_pred Ee-CCeEEEE--Ec-CCceEEEeecCcceEecCChhheeEEEEcCEEEEEcCCcceeecccccccCCCCCCccEEEEEcc Confidence 00 1111222 11 2333444444434321 111110 011000000 000000000 0011111 Q ss_pred EEeCcE-EEEEeCCceEEEEEEcCCCCceeeeEEEeccc---------cccccccceEEEEecccC--Cceeeecccccc Q lcl|Aclame:pro 121 TQSADV-LTLVHPAYPPKELRRYAHDNWQLVDVVTKNGP---------FEDINIDESLTVYASAST--GTITLTASASIF 188 (823) Q Consensus 121 ~qsaD~-~fIvn~~~~p~~l~r~~~~~ws~~~~~f~~~p---------~~~i~~~~s~t~t~~a~t--~~~Tvtas~~~~ 188 (823) .|-++. .+-+|..-. ..+....+.+..+. ....+..........+.. ..+........+ T Consensus 157 g~y~~~y~i~i~g~~s---------~~~~t~t~~~~~~s~~~v~~~~~~~~~~~~~~~~~~~ia~~l~~~~~~~~~~~~~ 227 (808) T protein:vir:88 157 GQYGRTLSITINGDGT---------GSSPQASIKMPNGSAEKVPAGDPYAGMNQVDMTDASWIAAELARQLTVSLGGSGW 227 (808) T ss_pred cccCceEEEEEecCCc---------ceeeeEeEEEccCcccceeeccceeecccCCccccccchhhheeeeeecccccce Confidence 111111 111221110 00111111111111 000111000000000000 000000011111 Q ss_pred ccccccceEEEcccccceecceeee----------eeeeeeeeEEe-----ccceeeeEeccccee-----ecccccCce Q lcl|Aclame:pro 189 GAEQVGKLFYLEQPAVDSVPVWETS----------KSTSIGDIRRA-----DSNYYRAVTAGKTGT-----LRPSHTEGT 248 (823) Q Consensus 189 ~a~~vg~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~-----~~~~~~~~~~~~t~~-----~~~~~~~~~ 248 (823) .....+..+++...+........+. ..+.+...... ++.... +....+.. +... .... T Consensus 228 ~~~~~~~~~~i~~~a~~~~~~~~t~~g~~~~~~~~~~~~v~~~~~lp~~~p~g~~v~-i~~~~~~~~~~~yv~~~-~~~~ 305 (808) T protein:vir:88 228 SFQAGTGWILINAPANDNVRQIATKDGYADTLLSGFIYQVQTFTKLPANAPPGYLVE-ITGESARSGDNYWVQYD-ASGK 305 (808) T ss_pred EEEeccceEEEEeccCceeEEEcccCCcCcceeeeeeeeccceeeccccCCCCcEEE-EEecCCCCCceeEEEEE-cCCe Confidence 1111112222222221111000000 00000000000 000000 00000000 0000 1122 Q ss_pred EEEEeceecc----ccceEEEEEEecCccEEEEEEec-C-ccccccEEEEeeccccccc-------------cCcceecc Q lcl|Aclame:pro 249 SWDGWGGSGD----DDTGIEWEYLHSGFGIARITAVN-G-TTATAEVISYIPSQVVGED-------------NASYKWAK 309 (823) Q Consensus 249 ~~~~~~~~~~----~~~~~~~~~~~~~~g~~~~t~~~-~-~~~~~~~~~~~~~~~~~~~-------------~~t~~~~~ 309 (823) .|.+...... ......+.......|.+.+.... . .....+..--.|..+-+.. .+...|.. T Consensus 306 ~w~e~~~~~~~~~~~~~tmp~~lv~~~~~~~~~~~~~w~~r~~Gd~~tnp~psf~g~~~~~v~f~q~RL~f~~~~~v~~S 385 (808) T protein:vir:88 306 VWKETAKPKIIAGFNNATLPHALVRAADGQFDWTPLTWDGRNAGDDDTNPMPSFVGATINDVFFFRNRLGFLSGENVVMS 385 (808) T ss_pred EEEEeeeccceeeecccceeEEEEecCCceEEEEecccccccccccccCccceecCCceeEEEEEcceEEEeeCCeEEEE Confidence 2332211111 11112222333333333332211 1 0000000000000000000 01111100 Q ss_pred -----cCc--------ccCC--------CCc---cEEEEEeceEEEEeCcCCCcEEEEEcccCcccccccccCCCCCcEE Q lcl|Aclame:pro 310 -----YAW--------NSVN--------GYP---GTVVYYQQRLYFAASTAFPQTIWASRTGDYKDFGKSNPTQDDDRII 365 (823) Q Consensus 310 -----~~w--------~~~~--------g~P---s~v~f~q~RL~f~~~~~~p~~V~~Sr~gdy~nF~~~t~~~DdD~I~ 365 (823) ..| .|.. ..+ ..+-.++.-|++..... + ..+| |+- =+.+++ |. T Consensus 386 rtgd~~nF~~~t~~~~~DdD~i~~~~~~~~~~~i~~~v~~~~~L~i~T~~~--e-~~l~--~~~-~lTP~~-------~~ 452 (808) T protein:vir:88 386 RTSKYFNFFPSSVATLSDDDPIDVAISHNRISILKYAVPFSEQLLLWSDQA--Q-FVLS--SKT-ILSSKT-------IE 452 (808) T ss_pred eccCcccccCCcccCCCCCccEEEEecCCccceeeEEeecCCcEEEEecCc--E-EEEe--CCC-ccccee-------EE Confidence 001 0000 011 11223433344333321 1 1222 110 011111 11 Q ss_pred EEEcCC-C-ceEEEEEeecCcEEEEecCcEEE------EecCCCccccccceEEEEeecc--cCcccccE-EeCCeEEEE Q lcl|Aclame:pro 366 YTYAGR-Q-VNEIRHLIDVGSLVALTSGGEYV------ITGDQNKVLTPSSFAFSSQGSN--GSSNVPPI-AVANIALFV 434 (823) Q Consensus 366 ~~~~~~-~-~~~i~~~v~~~~Ll~~t~~~q~~------l~~~~~~~lTP~~~~i~~~s~~--g~~~~~Pv-~vg~~v~f~ 434 (823) +...+. . .+.++=+.-.+.++.....+.|. .....++......+++...-.+ +....--. .-...++|. T Consensus 453 ~~~~s~~~~~~~~~Pv~vG~~v~f~~~~g~~~~v~r~~~~~~~~d~y~~~dlt~~~~h~~~~~~~~~~~~~~~~~~~v~~ 532 (808) T protein:vir:88 453 LDLTTEFDVSDGARPYGIGRGVYFAAPRASFTSLKRYYAIQDVSDVKSAEDVSAHVPSYITNTVHAIHGSGTENFVSILS 532 (808) T ss_pred EEEEEEecccCCCCceEeCCeEEEEecCCCeeEEEEEEEeeeccCceehhhHHHHHHHhcCCCeEEEEEeCCCCeEEEEE Confidence 111111 1 11222222234455555555331 1111122222222211110011 00000000 012234566 Q ss_pred ecCCCEEEEEEeeccccceeecchHHHHHHhcCCCc-eEEEEEcCCCcEEEEEEeCCCeEEEEEEeccccceeEEeeccC Q lcl|Aclame:pro 435 QEKGSVVRDLAYSFDVDGYQGNDLTILANHLFQKHS-IVDWCFSIVPYSSAFCIRDDGKLLVMTYLRDQQVFAWAPQSST 513 (823) Q Consensus 435 ~~~g~~v~e~~~~~~~d~~~~~dlt~~~~hl~~~~~-~~~~a~~~~p~~~~~~~~~dg~l~~~ty~~~q~v~aW~~w~~~ 513 (823) .+...++.-+.|-... .-+++..-+.|-+.+.. ...++.....+.+.++++.++.++...+..+++- .+ T Consensus 533 ~~~~g~l~~~~y~~~~---~e~~v~aW~r~~~~g~~~~~~~~~~~~~d~l~~vV~r~~~~~ler~~~~~~~-------~~ 602 (808) T protein:vir:88 533 DGSPNKVFIYKFLYLD---EILQQQSFSHWEFGDAATTRVLAASCIGSYCYLMIDRPEGLCLERMEFTQHT-------ID 602 (808) T ss_pred EcCCCEEEEEEEeccC---CceeEEeeEEEecCCCeeEEEEEEeccCCEEEEEEEcCCcEEEEEEeeccCC-------CC Confidence 6666677777665321 23334444556665432 2233333333444445555565554443222210 00 Q ss_pred CceEEEEEEecCCCCEEEEEEEecCCCcEEEEEEeeccccCCcccceeEeeeeeEEeccccceeeeEeeccccCcCccCc Q lcl|Aclame:pro 514 GKYESTCSISEGNEDAVYFVVNRTVNGQTVRYIERLSSRLFTSDEDAFFVDSGLSYDGRNTSDRTMTITGGSGEWDYLAE 593 (823) Q Consensus 514 g~~~~~~~~~~~~~d~l~~~v~r~~~g~~~~~~e~~~~~~~~~~~~~~~lD~~~~y~~~~~~~~~~~~~~~~~~l~~~~~ 593 (823) ...+ .+.+|+=.....+|. ......+...+|+. ..-.++.|+++ T Consensus 603 ~~~~---------~~~~~lD~~~~~~~g-----------~~~~~~~~t~~~~~----------------~~~~~~~~~~~ 646 (808) T protein:vir:88 603 YSIE---------PYRTYMDMKKTIVLG-----------AYNIDTNLTSFDVR----------------TAYGGTPGPES 646 (808) T ss_pred Cccc---------cceeeeeeeeeeccc-----------cccCccccceeecc----------------cccccccccce Confidence 0000 000111111111100 00000000111111 11125778888 Q ss_pred ceEEe-cCCeEEccccc----ccEEEec--ccCceeEeeeEEEEEEEEeeEEecCCCceeeEeccee-eeeeeeeeeecc Q lcl|Aclame:pro 594 YTISV-SGGAYFTSSDV----GAQLQFP--YTGADPDTGYEVSKELRCDIISVTSNTAVVVRANRNV-PPSLRNVATTNW 665 (823) Q Consensus 594 ~~v~~-~dg~~~~~~~v----gg~i~l~--~~~~~~~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~v-~~~~~~~~~~~~ 665 (823) ..+.+ +||.++..... +..++++ +++++++||++|+++++++++++..+.+......+.+ +.++++..... T Consensus 647 ~~~~~~~dg~~~~~~~~~~~~~~~~~~~~~~~~~~v~vGl~y~s~~~~~p~~~~~~~g~~~~~~~~~gr~~l~r~~~~~- 725 (808) T protein:vir:88 647 TFYTIDQQGVLIEHEARDWATNPYISFVGNRAGEQMVIGKQYTFQYEFSKFLIKQTADDGSTSTEDIGRLQLRRAWLNY- 725 (808) T ss_pred eEEEEcCCceEEeeecccccCcceEEeCCCccCceEEEeeeeeEEEEecceEEecCCCCcceeecccceEEEEEEEEEe- Confidence 88877 67766543322 2245554 7799999999999999999999987665443322211 11222211111 Q ss_pred cccceeeecccccccceEEEEeCCcee------CCEEEcCCEEEecCC--CcEEEECcccceEEEEcceecCC---CCcc Q lcl|Aclame:pro 666 QMARRTFGGLSHLEGQTVNILSDANVE------PQKVVSGGAVTLESP--GAVVHIGLPITAEFETLDINING---QETL 734 (823) Q Consensus 666 g~~~~~~~gl~~l~g~~v~v~~dg~~~------~~~~v~~g~itl~~~--~~~~~~gl~~~~~~~~l~~~~~~---~~~~ 734 (823) ...+..--.++.-.-.+ .....|... +...+..|.+++|.. +.... |-+.++ .+||+.+-+ .|.- T Consensus 726 ~~tg~~~v~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~tg~~~vp~~~~~~~~~--v~i~~d-~P~P~tilsi~~eg~y 801 (808) T protein:vir:88 726 EESGAFEINVNNGSSEF-VYVMTGGRLGIQRVLGELSVGTGQFKFPVTGNAVNQR--VTITSS-NPNPLNVIGCGWEGNY 801 (808) T ss_pred ecccceEEEeCCCcccc-eeeccCcccCcccccCccccccceEEEEecccCceeE--EEEEEC-CCCceEEEEEEEEEEE Confidence 11111000111111111 122233222 222334577766643 23333 233343 666666532 3556 Q ss_pred cccceeE Q lcl|Aclame:pro 735 LDKKQVI 741 (823) Q Consensus 735 ~~~~~~i 741 (823) .-|.||| T Consensus 802 ~~r~~~v 808 (808) T protein:vir:88 802 IRRSSGI 808 (808) T ss_pred eccccCC Confidence 6677777 Done!