Query lcl|Aclame:protein:vir:101804|NCBI_annot:gp18|genbank:acc:YP_238881;genbank:gi:66391956;genbank:GeneID:3416631 Match_columns 663 No_of_seqs 222 out of 925 Neff 10.2 Searched_HMMs 1612 Date Sun Dec 1 12:26:33 2013 Command /home/guerois/workspace/virfam/python/lib/hhsearch//hhsearch2 -i .//seq/seq_15 -d /home/guerois/workspace/virfam/python/profile_database/capsid_neck_tail.hhm -glob -cpu 7 -o .//seq/HHR/seq_15_vs_rec_db.hhr No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM 1 protein:vir:101187 Length: 663 100.0 8E-167 5E-170 931.3 57.9 663 1-663 1-663 (663) 2 protein:vir:101804 Length: 663 100.0 1E-166 7E-170 930.3 57.6 663 1-663 1-663 (663) 3 protein:vir:100539 Length: 663 100.0 2E-164 1E-167 918.4 55.7 663 1-663 1-663 (663) 4 protein:vir:6894 Length: 660 # 100.0 2E-160 1E-163 896.7 57.0 658 1-662 1-660 (660) 5 protein:vir:106427 Length: 679 100.0 2E-160 1E-163 896.6 55.8 660 1-662 1-679 (679) 6 protein:vir:98263 Length: 664 100.0 4E-160 2E-163 894.5 57.3 661 1-662 1-664 (664) 7 protein:vir:108052 Length: 660 100.0 8E-160 5E-163 892.7 56.1 658 1-661 1-660 (660) 8 protein:vir:103456 Length: 659 100.0 3E-158 2E-161 884.2 56.5 657 1-661 1-659 (659) 9 protein:vir:6594 Length: 666 # 100.0 2E-158 2E-161 884.7 54.7 658 1-663 1-666 (666) 10 protein:vir:80984 Length: 666 100.0 9E-158 6E-161 881.4 56.1 657 1-663 1-666 (666) 11 protein:vir:7206 Length: 659 # 100.0 3E-157 2E-160 878.9 57.6 657 1-661 1-659 (659) 12 protein:vir:5663 Length: 671 # 100.0 9E-148 5E-151 826.9 53.6 650 1-658 1-671 (671) 13 protein:vir:104477 Length: 749 100.0 1E-139 6E-143 782.7 55.6 637 1-658 1-749 (749) 14 protein:vir:106984 Length: 743 100.0 1E-138 8E-142 776.5 52.7 638 1-659 1-743 (743) 15 protein:vir:104858 Length: 729 100.0 9E-138 6E-141 771.8 52.9 643 1-660 3-729 (729) 16 protein:vir:79092 Length: 477 100.0 8E-108 5E-111 607.7 42.1 470 1-660 1-477 (477) 17 protein:vir:107865 Length: 477 100.0 1E-106 8E-110 601.1 40.7 470 1-660 1-477 (477) 18 protein:vir:98824 Length: 774 100.0 2E-103 1E-106 584.0 38.4 458 1-655 281-774 (774) 19 protein:vir:79181 Length: 390 100.0 1.1E-95 6.7E-99 541.2 36.2 380 1-662 2-390 (390) 20 protein:vir:79141 Length: 391 100.0 1.3E-95 8.2E-99 540.7 35.9 381 1-663 2-391 (391) 21 protein:vir:6079 Length: 396 # 100.0 3E-95 1.9E-98 538.8 37.0 387 1-663 1-396 (396) 22 protein:vir:103993 Length: 390 100.0 2.9E-95 1.8E-98 538.9 35.7 380 1-662 2-390 (390) 23 protein:vir:78206 Length: 390 100.0 2.9E-95 1.8E-98 538.9 35.7 380 1-662 2-390 (390) 24 protein:vir:103168 Length: 641 100.0 3.4E-95 2.1E-98 538.5 35.7 530 1-550 3-641 (641) 25 protein:vir:98553 Length: 395 100.0 1.3E-94 8.2E-98 535.2 37.4 386 1-662 1-395 (395) 26 protein:vir:5711 Length: 396 # 100.0 3.8E-94 2.4E-97 532.7 38.8 387 1-663 1-396 (396) 27 protein:vir:2035 Length: 396 # 100.0 1.5E-94 9.1E-98 535.0 35.9 387 1-663 1-396 (396) 28 protein:vir:1172 Length: 391 # 100.0 9.4E-94 5.8E-97 530.6 34.7 380 1-662 3-391 (391) 29 protein:vir:100323 Length: 393 100.0 7.3E-93 4.5E-96 525.7 37.3 379 1-663 4-393 (393) 30 protein:vir:1845 Length: 392 # 100.0 6.8E-93 4.2E-96 525.9 37.1 383 1-662 1-392 (392) 31 protein:vir:96740 Length: 388 100.0 2.8E-89 1.7E-92 506.1 36.9 375 1-657 4-388 (388) 32 protein:vir:10336 Length: 386 100.0 4.4E-89 2.7E-92 505.0 35.5 376 1-657 1-386 (386) 33 protein:vir:5833 Length: 742 # 100.0 4.3E-77 2.7E-80 439.3 34.0 530 1-654 202-742 (742) 34 protein:vir:63742 Length: 562 100.0 2E-66 1.2E-69 380.8 36.7 537 1-653 8-562 (562) 35 protein:vir:80488 Length: 562 100.0 1.2E-64 7.2E-68 371.1 38.7 538 1-653 1-562 (562) 36 protein:vir:102819 Length: 648 100.0 2E-64 1.2E-67 369.8 38.3 585 1-651 1-648 (648) 37 protein:vir:79798 Length: 717 100.0 8.6E-62 5.3E-65 355.4 40.1 615 1-648 1-717 (717) 38 protein:vir:95741 Length: 587 100.0 4.6E-62 2.8E-65 356.9 37.3 565 1-653 1-587 (587) 39 protein:vir:80779 Length: 569 100.0 1.2E-61 7.2E-65 354.6 37.6 539 1-653 1-569 (569) 40 protein:vir:99306 Length: 587 100.0 6.8E-60 4.2E-63 344.9 40.4 560 1-653 1-587 (587) 41 protein:vir:96586 Length: 587 100.0 4E-58 2.5E-61 335.3 39.4 559 1-653 1-587 (587) 42 protein:vir:100829 Length: 607 100.0 9.1E-52 5.7E-55 300.4 35.4 556 1-659 17-607 (607) 43 protein:vir:102957 Length: 437 100.0 8.3E-51 5.2E-54 295.1 34.0 415 1-647 9-437 (437) 44 protein:vir:101326 Length: 529 100.0 3.7E-43 2.3E-46 253.2 33.3 491 1-648 1-529 (529) 45 protein:vir:105470 Length: 451 100.0 8.8E-41 5.5E-44 240.2 34.6 423 1-647 9-451 (451) 46 protein:vir:7653 Length: 581 # 100.0 2.2E-37 1.4E-40 221.6 30.0 540 40-663 1-581 (581) 47 protein:vir:107310 Length: 581 100.0 2.7E-36 1.7E-39 215.6 33.4 542 40-663 1-581 (581) 48 protein:vir:78986 Length: 436 99.9 3.6E-27 2.2E-30 165.6 35.4 406 1-647 1-436 (436) 49 protein:vir:3788 Length: 376 # 99.3 1.2E-11 7.7E-15 80.4 27.0 354 229-655 1-376 (376) 50 protein:vir:102359 Length: 356 99.3 1.9E-12 1.2E-15 84.8 21.8 324 216-646 1-356 (356) 51 protein:vir:3751 Length: 376 # 99.3 6.7E-11 4.2E-14 76.3 29.5 355 229-655 1-376 (376) 52 protein:vir:78782 Length: 370 99.2 9.1E-11 5.6E-14 75.6 25.8 351 229-658 1-370 (370) 53 protein:vir:276 Length: 369 # 99.1 6.5E-10 4.1E-13 70.9 27.9 349 258-651 1-369 (369) 54 protein:vir:4517 Length: 498 # 98.9 5.9E-09 3.7E-12 65.7 24.7 443 1-651 1-498 (498) 55 protein:vir:489 Length: 498 # 98.9 1.4E-08 8.7E-12 63.6 25.4 443 1-663 10-496 (498) 56 protein:vir:4463 Length: 498 # 98.8 1.6E-08 9.7E-12 63.4 24.0 441 1-663 1-496 (498) 57 protein:vir:95263 Length: 450 98.6 2.7E-07 1.7E-10 56.6 25.9 411 146-649 1-450 (450) 58 protein:vir:1996 Length: 495 # 98.4 6.7E-07 4.1E-10 54.4 28.6 442 1-648 11-495 (495) 59 protein:vir:80052 Length: 331 98.2 2.6E-06 1.6E-09 51.2 23.2 308 272-648 1-331 (331) 60 protein:vir:5260 Length: 502 # 98.0 8.3E-06 5.2E-09 48.4 33.8 462 1-648 1-502 (502) 61 protein:vir:3165 Length: 426 # 94.7 0.0036 2.2E-06 34.0 17.4 340 272-648 1-426 (426) 62 protein:vir:106730 Length: 501 86.2 0.047 2.9E-05 27.8 33.4 449 1-657 1-501 (501) 63 protein:vir:101576 Length: 501 84.4 0.061 3.8E-05 27.2 33.1 451 1-657 1-501 (501) 64 protein:vir:3636 Length: 501 # 78.4 0.12 7.1E-05 25.7 34.6 450 1-657 1-501 (501) 65 protein:vir:99586 Length: 507 77.7 0.12 7.6E-05 25.6 30.6 457 1-647 1-507 (507) 66 protein:vir:96104 Length: 504 72.5 0.18 0.00011 24.6 32.0 453 1-647 1-504 (504) 67 protein:vir:78611 Length: 501 61.4 0.35 0.00022 23.1 35.6 453 1-657 1-501 (501) No 1 >protein:vir:101187 Length: 663 # NCBI annotation: tail sheath protein # Family: family:all:661 # MgeID: mge:1582 # MgeName: 44RR2.8t # Cross-refs: genbank:acc:NP_932509;genbank:gi:37651635;genbank:GeneID:2610680 Probab=100.00 E-value=7.7e-167 Score=931.27 Aligned_cols=663 Identities=100% Similarity=1.469 Sum_probs=554.1 Q ss_pred CceecCceEEEEecCCCcccccCCCceEEEeecccCCCCcceEeCCHHHHHHHcCCcCCCchhHHHHHHHHhcCCceEEE Q lcl|Aclame:pro 1 MALLSPGIEMKETSINSTVVRSATGRAAIVGKFAWGPAYEVRQVTNEVELVDMFGSPDNVTAPYFMSAMNFLQYGNDLRL 80 (663) Q Consensus 1 ~~~~~PGVyveEv~~~~~i~~v~Ts~~afvG~~~~Gpv~~p~~i~s~~e~~~~FG~~~~~~~~~~~~~~~F~nGG~~~~v 80 (663) |+|++|||||||++.+.+|++|+||++||||+|+|||+|+|++|+||.||+|.||++.+.+|++|++++||+|||++||| T Consensus 1 ~~~~~PgVyv~e~~~~~~i~~v~ts~~~fvG~~~~Gp~~~p~~i~s~~d~~~~fG~~~~~~~~~~~v~~~f~ngg~~~~v 80 (663) T protein:vir:10 1 MALLSPGIEMKETSINSTVVRSATGRAAIVGKFAWGPAYEVRQVTNEVELVDMFGSPDNVTAPYFMSAMNFLQYGNDLRL 80 (663) T ss_pred CceecCceEEEEecCcccccccCccceeEEeeeccCCCCccEEecCHHHHHHHhCCcCccchhHHHHHHHHHhCCCeEEE Confidence 99999999999998777899999999999999999999999999999999999999999999999999999999999999 Q ss_pred EEeccccccccccccccceeeeeccccccccccccccccccccccccceeeeeeecccceeeeeecccchhccccccccc Q lcl|Aclame:pro 81 VRVIDMEKAKNASPLVNQVSVTITTEGQGYTVGDAITVKYNNATITEAGKVTAVDSDGKIKSLFVPTAEIIAKTRQLGTY 160 (663) Q Consensus 81 vRv~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~v~~~~~~g~~~~~~~~~~~~~~~~~~~~t~ 160 (663) ||++++++.+++..+.+....+....+.+..+++.+++...........+....+.++........+............. T Consensus 81 vRv~~~~~~~~a~~~~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~~~~n~~~~~v~~~~a~~~~~~~~v~~~ 160 (663) T protein:vir:10 81 VRVIDMEKAKNASPLVNQVSVTITTEGQGYTVGDAITVKYNNATITEAGKVTAVDSDGKIKSLFVPTAEIIAKTRQLGTY 160 (663) T ss_pred EEccCCcccccccccCCcceeeeeccccCccccccccccccccccccccceeeeccCCceEEEEecccccccccccccee Confidence 99999888888777777777777777777788888888776666666666666666665554444333322222222222 Q ss_pred ccceeceeeeecccccceeeeeecccccccccccccccccccccccccccccccccccccceeeecchhhcccccccccc Q lcl|Aclame:pro 161 PTLGDNWRIDVSGASGGSAAALALGNIVVDSGVTFGNSEDAPAVMTSPAVMEKYAKFGMPLISAVYPGEIGSTVEVEIVS 240 (663) Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~g~~g~~v~v~~~~ 240 (663) .............................+.+.............+.............+...+..++.+++.+.+.+.. T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~v~~vv~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~a~~~G~~Gn~i~v~i~~ 240 (663) T protein:vir:10 161 PTLGDNWRIDVSGASGGSAAALALGNIVVDSGVTFGNSEDAPAVMTSPAVMEKYAKFGMPLVSAVYPGEIGSTVEVEIVS 240 (663) T ss_pred eeccccceeEeeeccccccccccccceecccceeeEeeccccccccccchhhhcccccceeeeeecccccccceeEEecc Confidence 22222222111111111111111111111111111111111122222222223334445667788999999999888776 Q ss_pred ccccccccccceecccceecccceeEEEecccccccceeeeccCCcceeeEeeeecccccccccchhhhhhhhcCCCceE Q lcl|Aclame:pro 241 KTAFNSGAQQTIYPFGGTRTSNARGVIQYGPMTDDQFAIIVRRDGIVVESTVLSTRKGDRDVYGSNIFMDDYFRNGGSNF 320 (663) Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ 320 (663) ............+................++..++.+.+++..++...+.+.++...+.+........+.+.+.++++.+ T Consensus 241 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (663) T protein:vir:10 241 KTAFNSGAQQTIYPFGGTRTSNARGVIQYGPMTDDQFAIIVRRDGIVVESTVLSTRKGDRDVYGSNIFMDDYFRNGGSNF 320 (663) T ss_pred cccccccccccccccccccccccceeeeeccccccceeEEEecCCcceeeeeeeecccccccchhhhhhhhhhccCcceE Confidence 65555555555555555566666666777778888888888888888888888888888888888888888888888888 Q ss_pred EEEeecccCCccceeEEecCcccccccccchhhhHHHHHhhhhccccceeEEeeccCcCChhHHHHHHHHHHHHHHhhCC Q lcl|Aclame:pro 321 IFASSEGWPAGFTGIIQLGGGTSANADVGADELIKGWDLFSDREALHVNLMIAGACGSDGAEIASTVQKYVVSLADDRQD 400 (663) Q Consensus 321 v~~~~~~~~~~~~~~~~l~gg~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 400 (663) +.+.....+........+.||.|+....+..+++++++.+...+.+++++++++.+.+.+.....+++++|++||+++++ T Consensus 321 ~~~~~~~~~~~~~~~~~l~gg~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~~~~~~~~~~~~v~~al~~~a~~~~~ 400 (663) T protein:vir:10 321 IFASSEGWPAGFTGIIQLGGGTSANADVGADELIKGWDLFSDREALHVNLMIAGACGSDGAEIASTVQKYVVSLADDRQD 400 (663) T ss_pred EEEeecccCccccceeEcccccCCCccccchhhHHHHHhhhcccccceeEEEeccCCCCchhhHHHHHHHHHHHHHhhCC Confidence 88888888877778889999999888888899999999999999999999999998888888889999999999999999 Q ss_pred eEEEecccccccccccccccHHHHHHHHhhcccccchhhhccCcCcceEEEecCceeecccccCceeEechHHHHHHHHH Q lcl|Aclame:pro 401 CVAIVNPPAELMVGIPTSTAVKNIVEWRNGMTGSGEVVDNNMNISSTYAFIIGNYKYQYDKYNDINRWVPLAADIAGLCA 480 (663) Q Consensus 401 ~~~i~d~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~p~~~~~d~~~~~~~~~p~s~~~AG~~a 480 (663) ||+|+|+|.+.........+.+++++|++.............+++|+|+++||||++++|+.+++.+++||||++||+|| T Consensus 401 ~~ai~d~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~P~~~~~d~~~~~~~~~p~s~~vAGl~A 480 (663) T protein:vir:10 401 CVAIVNPPAELMVGIPTSTAVKNIVEWRNGMTGSGEVVDNNMNISSTYAFIIGNYKYQYDKYNDINRWVPLAADIAGLCA 480 (663) T ss_pred EEEEEecCcccccccccccchHHHHHHHHhccccccchhhccccCcceEEEEccceEEecccCCceEEechhHHHHHHHH Confidence 99999999999888888999999999999999888889999999999999999999999999999999999999999999 Q ss_pred hhhhccCceecccceecceeecceeeeeecChhhhhhhhhCCceEEEEeeCCCcEEEEcceecCCCCccceeeehhhHHH Q lcl|Aclame:pro 481 YTDQVSHPWMSPAGYRRGQIRNCIKLAIEPKQSMRDTMYQVAINPVTGFAGGDGFVLFGDKMATQVPSPFDRINVRRLFN 560 (663) Q Consensus 481 ~~d~~~g~~~span~~~~~i~~~~~~~~~~~~~~~~~Ln~~~in~i~~~~~~~G~~~wG~rT~~~~~~~~~~i~vrR~~~ 560 (663) |+|.++||||||+|+++++|.|++++++.+++.|++.||++|||||++|++.+||++||+||+++++++|||||+||||+ T Consensus 481 r~D~~~g~~~sPan~~~~~i~g~~~~~~~~~~~~~~~Ln~~gin~i~~~~~~~G~~~wG~rT~s~~~s~~~~i~vrR~~~ 560 (663) T protein:vir:10 481 YTDQVSHPWMSPAGYRRGQIRNCIKLAIEPKQSMRDTMYQVAINPVTGFAGGDGFVLFGDKMATQVPSPFDRINVRRLFN 560 (663) T ss_pred HhhccCCceEccCCceeccccccccceeccChhHHHHHhhCCceEEEEEeCCCcEEEEcccccCCCCcccceEehhhHHH Confidence 99999999999999999999999999999999999999999999999999878999999999999988999999999999 Q ss_pred HHHHHHHHHHHHhhcccCCHHHHHHHHHHHHHHHHHHHhcCceEEEEEEEccCCCCHHHhhCCEEEEEEEEEecCcceEE Q lcl|Aclame:pro 561 MLKKNIGDTSKYELFENNDAFTRQSFRMETSQYLDGIRSLGGCYDFRVVCDTTNNTPNVIDRNEFVGTIYVKPPRSINYI 640 (663) Q Consensus 561 ~i~~~~~~~~~~~v~epn~~~~~~~v~~~i~~~L~~l~~~gal~g~~v~~d~~~nt~~~i~~G~~~~~i~~~p~~p~e~i 640 (663) ||+++|+++++|+||||||+.+|++|+++|++||++||++|+|.||+|+||+++||++||++|+|+|+|+++|++|+||| T Consensus 561 ~i~~si~~~~~~~v~e~n~~~l~~~i~~~i~~~L~~l~~~gal~g~~v~~d~~~nt~~~i~~G~~~~~i~~~p~~pae~i 640 (663) T protein:vir:10 561 MLKKNIGDTSKYELFENNDAFTRQSFRMETSQYLDGIRSLGGCYDFRVVCDTTNNTPNVIDRNEFVGTIYVKPPRSINYI 640 (663) T ss_pred HHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhcCceeeeEEEEcCCCCCHHHhhCCeEEEEEEEEecCCcceE Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred EEEEEEeecccchhhhhhhhhcC Q lcl|Aclame:pro 641 TLNMVATSTGANFDELIGPMQLA 663 (663) Q Consensus 641 ~~~~~~~~~~~~~~e~~~~~~~~ 663 (663) +|||+|++++++|+|++++|||| T Consensus 641 ~~~~~~~~~~~~~~e~~~~~~~~ 663 (663) T protein:vir:10 641 TLNMVATSTGANFDELIGPMQLA 663 (663) T ss_pred EEEEEEeecCccHHHHHHHHhcC Confidence 99999999999999999999999 No 2 >protein:vir:101804 Length: 663 # NCBI annotation: gp18 # Family: family:all:661 # MgeID: mge:1580 # MgeName: 31 # Cross-refs: genbank:acc:YP_238881;genbank:gi:66391956;genbank:GeneID:3416631 Probab=100.00 E-value=1.1e-166 Score=930.35 Aligned_cols=663 Identities=100% Similarity=1.470 Sum_probs=557.7 Q ss_pred CceecCceEEEEecCCCcccccCCCceEEEeecccCCCCcceEeCCHHHHHHHcCCcCCCchhHHHHHHHHhcCCceEEE Q lcl|Aclame:pro 1 MALLSPGIEMKETSINSTVVRSATGRAAIVGKFAWGPAYEVRQVTNEVELVDMFGSPDNVTAPYFMSAMNFLQYGNDLRL 80 (663) Q Consensus 1 ~~~~~PGVyveEv~~~~~i~~v~Ts~~afvG~~~~Gpv~~p~~i~s~~e~~~~FG~~~~~~~~~~~~~~~F~nGG~~~~v 80 (663) |+|+||||||||++.+.+|++|+||++||||+|+|||+|+|++|+||.||++.||++.+.+|++|++++||+|||++||| T Consensus 1 ~~~~~Pgvyv~e~~~~~~i~~~~t~~~~~vG~~~~Gp~~~p~~v~~~~~~~~~fg~~~~~~~~~~~~~~~f~ngg~~~~v 80 (663) T protein:vir:10 1 MALLSPGIEMKETSINSTVVRSATGRAAIVGKFAWGPAYEVRQVTNEVELVDMFGSPDNVTAPYFMSAMNFLQYGNDLRL 80 (663) T ss_pred CceecCceEEEEecCCccccccCcccceeEeecccCCCCccEEecCHHHHHHhcCCcCCcchhHHHHHHHHHhCCCeEEE Confidence 99999999999998767799999999999999999999999999999999999999999999999999999999999999 Q ss_pred EEeccccccccccccccceeeeeccccccccccccccccccccccccceeeeeeecccceeeeeecccchhccccccccc Q lcl|Aclame:pro 81 VRVIDMEKAKNASPLVNQVSVTITTEGQGYTVGDAITVKYNNATITEAGKVTAVDSDGKIKSLFVPTAEIIAKTRQLGTY 160 (663) Q Consensus 81 vRv~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~v~~~~~~g~~~~~~~~~~~~~~~~~~~~t~ 160 (663) ||++++..++++....+....+...++.+..+++.+++............+.....++........+............. T Consensus 81 vRv~~~~~~~~a~~~~~~~~~~~~~~~~~~~~g~~i~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~ta~~~~~~~~v~~~ 160 (663) T protein:vir:10 81 VRVIDMEKAKNASPLVNQVSVTITTEGQGYTVGDAITVKYNNATITEAGKVTAVDSDGKIKSLFVPTAEIIAKTRQLGTY 160 (663) T ss_pred EEccCCccccccccccccceeEEeecccccccccccccccccccccccccceeeecccceEEEeeccccccccccccccc Confidence 99999888888887777877777777777788888887766666655566666666655555444433333333333333 Q ss_pred ccceeceeeeecccccceeeeeecccccccccccccccccccccccccccccccccccccceeeecchhhcccccccccc Q lcl|Aclame:pro 161 PTLGDNWRIDVSGASGGSAAALALGNIVVDSGVTFGNSEDAPAVMTSPAVMEKYAKFGMPLISAVYPGEIGSTVEVEIVS 240 (663) Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~g~~g~~v~v~~~~ 240 (663) +.........................+..+...............+.............+.+.+..+|.+++.+++.+.. T Consensus 161 ~~~~~~~~~~~s~~s~~~~~a~~v~~v~~d~~~~v~~~~~a~~~~t~~~~~~~~~~~~~~~i~A~~~G~~Gn~i~V~i~~ 240 (663) T protein:vir:10 161 PTLGDNWRIDVSGASGGSAAALALGNIVVDSGVTFGNSEDAPAVMTSPAVMEKYAKFGMPLISAVYPGEIGSTVEVEIVS 240 (663) T ss_pred eeeccceeeEeeeccCccccccccceeccccceEEeeccccccccccccccccccccccceEEeccCCcccceeeeeecc Confidence 22222222222111111111112222222222222222222112222222223334455677888899999999988877 Q ss_pred ccccccccccceecccceecccceeEEEecccccccceeeeccCCcceeeEeeeecccccccccchhhhhhhhcCCCceE Q lcl|Aclame:pro 241 KTAFNSGAQQTIYPFGGTRTSNARGVIQYGPMTDDQFAIIVRRDGIVVESTVLSTRKGDRDVYGSNIFMDDYFRNGGSNF 320 (663) Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ 320 (663) ............+................++..++.+.++...++...+.+.++...+.+.......++.+.+.++.+.+ T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (663) T protein:vir:10 241 KTAFNSGAQQTIYPFGGTRTSNARGVIQYGPMTDDQFAIIVRRDGIVVESTVLSTRKGDRDVYGSNIFMDDYFRNGGSNF 320 (663) T ss_pred ccccccccccceecccccccccccceeecccccccceeeEeecCCcceeeecccccccccccccchhhhhhhhcCCcceE Confidence 66665566666666666666666677777788888888888888888888988888888888888888888888888888 Q ss_pred EEEeecccCCccceeEEecCcccccccccchhhhHHHHHhhhhccccceeEEeeccCcCChhHHHHHHHHHHHHHHhhCC Q lcl|Aclame:pro 321 IFASSEGWPAGFTGIIQLGGGTSANADVGADELIKGWDLFSDREALHVNLMIAGACGSDGAEIASTVQKYVVSLADDRQD 400 (663) Q Consensus 321 v~~~~~~~~~~~~~~~~l~gg~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 400 (663) +.+.....+.......++.+|.|+....+..+++++++.++..+.+.+++++++...+...+...+++.+|++||+++++ T Consensus 321 ~~~~~~~~~~~~~~~~~l~gg~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~~~~~~~~~~~~v~~~l~~~a~~~~~ 400 (663) T protein:vir:10 321 IFASSEGWPAGFTGIIQLGGGTSANADVGADELIKGWDLFSDREALHVNLMIAGACGSDGAEIASTVQKYVVSLADDRQD 400 (663) T ss_pred EEEeecccCccccceeEeccccCCccccchhhhHHHHHhhhcccccceeEEEeccCCCCchhhHHHHHHHHHHHHHhhCC Confidence 88888888888888899999999888888899999999999999999999999998888888888999999999999999 Q ss_pred eEEEecccccccccccccccHHHHHHHHhhcccccchhhhccCcCcceEEEecCceeecccccCceeEechHHHHHHHHH Q lcl|Aclame:pro 401 CVAIVNPPAELMVGIPTSTAVKNIVEWRNGMTGSGEVVDNNMNISSTYAFIIGNYKYQYDKYNDINRWVPLAADIAGLCA 480 (663) Q Consensus 401 ~~~i~d~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~p~~~~~d~~~~~~~~~p~s~~~AG~~a 480 (663) ||+++|+|.+.........+.+++++|++.............+++|+|+++||||++++|+.+++.+++||||++||+|| T Consensus 401 ~~ai~d~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~p~~~~~d~~~~~~~~~p~sg~vAGl~A 480 (663) T protein:vir:10 401 CVAIVNPPAELMVGIPTSTAVKNIVEWRNGMTGSGEVVDNNMNISSTYAFIIGNYKYQYDKYNDINRWVPLAADIAGLCA 480 (663) T ss_pred EEEEEecCcccccccccccchHHHHHHHHhccccccchhhhcccCccceEEEcCceEEecccCCceEEechhHHHHHHHH Confidence 99999999999888888899999999999999888999999999999999999999999999999999999999999999 Q ss_pred hhhhccCceecccceecceeecceeeeeecChhhhhhhhhCCceEEEEeeCCCcEEEEcceecCCCCccceeeehhhHHH Q lcl|Aclame:pro 481 YTDQVSHPWMSPAGYRRGQIRNCIKLAIEPKQSMRDTMYQVAINPVTGFAGGDGFVLFGDKMATQVPSPFDRINVRRLFN 560 (663) Q Consensus 481 ~~d~~~g~~~span~~~~~i~~~~~~~~~~~~~~~~~Ln~~~in~i~~~~~~~G~~~wG~rT~~~~~~~~~~i~vrR~~~ 560 (663) |+|.++||||||+|+++++|.|++++++.+++.|++.||++|||||++|++.+||++||+||+++++++|+|||+||||+ T Consensus 481 r~D~~~g~~~sPan~~~~~i~g~~~~~~~~~~~e~~~Ln~~gin~i~~~~~~~G~~~wG~rT~~~~~s~~~~i~vrR~~~ 560 (663) T protein:vir:10 481 YTDQVSHPWMSPAGYRRGQIRNCIKLAIEPKQSMRDTMYQVAINPVTGFAGGDGFVLFGDKMATQVPSPFDRINVRRLFN 560 (663) T ss_pred HhhccCCceEccCCceeccccccccceeecChhHHHHHhhCCceEEEEEeCCCcEEEEcccccCCCCcccceEehhhHHH Confidence 99999999999999999999999999999999999999999999999999878999999999999988999999999999 Q ss_pred HHHHHHHHHHHHhhcccCCHHHHHHHHHHHHHHHHHHHhcCceEEEEEEEccCCCCHHHhhCCEEEEEEEEEecCcceEE Q lcl|Aclame:pro 561 MLKKNIGDTSKYELFENNDAFTRQSFRMETSQYLDGIRSLGGCYDFRVVCDTTNNTPNVIDRNEFVGTIYVKPPRSINYI 640 (663) Q Consensus 561 ~i~~~~~~~~~~~v~epn~~~~~~~v~~~i~~~L~~l~~~gal~g~~v~~d~~~nt~~~i~~G~~~~~i~~~p~~p~e~i 640 (663) ||+++|+++++|+||||||+.||.+|+++|+.||++||++|+|.||+|+||+++||+++|++|+|+++|+++|++|+||| T Consensus 561 ~i~~si~~~~~~~v~epn~~~l~~~i~~~i~~~L~~l~~~gal~g~~v~~d~~~nt~~~i~~G~~~~~i~~~p~~pae~i 640 (663) T protein:vir:10 561 MLKKNIGDTSKYELFENNDAFTRQSFRMETSQYLDGIRSLGGCYDFRVVCDTTNNTPNVIDRNEFVGTIYVKPPRSINYI 640 (663) T ss_pred HHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeEEEEcCCCCCHHHhhCCeEEEEEEEEecCCcceE Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred EEEEEEeecccchhhhhhhhhcC Q lcl|Aclame:pro 641 TLNMVATSTGANFDELIGPMQLA 663 (663) Q Consensus 641 ~~~~~~~~~~~~~~e~~~~~~~~ 663 (663) +|||+|++++++|+|++++|||| T Consensus 641 ~~~~~~~~~~~~~~e~~~~~~~~ 663 (663) T protein:vir:10 641 TLNMVATSTGANFDELIGPMQLA 663 (663) T ss_pred EEEEEEeecCccHHHHHHHHhcC Confidence 99999999999999999999999 No 3 >protein:vir:100539 Length: 663 # NCBI annotation: gp18 tail sheath monomer # Family: family:all:661 # MgeID: mge:1488 # MgeName: 25 # Cross-refs: genbank:acc:YP_656380;genbank:gi:109290131;genbank:GeneID:4156517 Probab=100.00 E-value=1.7e-164 Score=918.43 Aligned_cols=663 Identities=86% Similarity=1.336 Sum_probs=544.3 Q ss_pred CceecCceEEEEecCCCcccccCCCceEEEeecccCCCCcceEeCCHHHHHHHcCCcCCCchhHHHHHHHHhcCCceEEE Q lcl|Aclame:pro 1 MALLSPGIEMKETSINSTVVRSATGRAAIVGKFAWGPAYEVRQVTNEVELVDMFGSPDNVTAPYFMSAMNFLQYGNDLRL 80 (663) Q Consensus 1 ~~~~~PGVyveEv~~~~~i~~v~Ts~~afvG~~~~Gpv~~p~~i~s~~e~~~~FG~~~~~~~~~~~~~~~F~nGG~~~~v 80 (663) |+|+||||||||+|++++|++|+||++||||+|+|||+|+|++|+||.||++.||++++.+|++|++++||+|||++||| T Consensus 1 ~~~~~Pgvyv~e~~~~~~~~~v~t~~~~fvG~~~~gp~~~p~~i~s~~~~~~~fG~~~~~~~~~~~v~~~f~ngg~~~~v 80 (663) T protein:vir:10 1 MALLSPGIEMKETSINSTVVRSATGRAALVGKFAWGPAYEIRQVTNEVELVDMFGSPDNVTAPYFMSAMNFLQYGNDLRL 80 (663) T ss_pred CccccCceEEEEecCcccccccccccceeeeccccCCCCcCEEecCHHHHHHHcCCcccccchHHHHHHHHHhCCCeEEE Confidence 99999999999999777899999999999999999999999999999999999999999999999999999999999999 Q ss_pred EEeccccccccccccccceeeeeccccccccccccccccccccccccceeeeeeecccceeeeeecccchhccccccccc Q lcl|Aclame:pro 81 VRVIDMEKAKNASPLVNQVSVTITTEGQGYTVGDAITVKYNNATITEAGKVTAVDSDGKIKSLFVPTAEIIAKTRQLGTY 160 (663) Q Consensus 81 vRv~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~v~~~~~~g~~~~~~~~~~~~~~~~~~~~t~ 160 (663) |||.++.+++++..+.+....+...++....+++.+.+............+......+...................... T Consensus 81 vRv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~~~~~g~~~~~~~~~a~~~~~a~~~~~~ 160 (663) T protein:vir:10 81 VRVIDMEQAKNASPLFNQIEVTITTEGQGYTVGDTVSIKHNTTTVTEEGKVTKVDADGKIKALFVPSSAVIAKAKQLGTY 160 (663) T ss_pred EecCCcccccccccccccceeeEeecccCccccceeeecccccccccCcceeeeccCCceeEEEeccccccccccccccc Confidence 99999888877777777777777777777788888877765555444444444445555554444433322222333233 Q ss_pred ccceeceeeeecccccceeeeeecccccccccccccccccccccccccccccccccccccceeeecchhhcccccccccc Q lcl|Aclame:pro 161 PTLGDNWRIDVSGASGGSAAALALGNIVVDSGVTFGNSEDAPAVMTSPAVMEKYAKFGMPLISAVYPGEIGSTVEVEIVS 240 (663) Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~g~~g~~v~v~~~~ 240 (663) +......................+..+..+.............................+...+..++.+|+.+.+.+.. T Consensus 161 ~~~~~a~~~~v~~~~~~~~~a~av~~i~~dg~vt~~~~~~a~~~~~~~~~~~~~~~~~~~~~~a~~~g~~G~~i~v~~~~ 240 (663) T protein:vir:10 161 PVLGDNWRAEVSGASGGSAATLTLGGIVVDSGVTFGNSEEAPDVMTSTKVLANFAKYGMPLISAVYPGEIGSTVEVEVIS 240 (663) T ss_pred cccccceeeEEeeccccccccceeEeeecCCceeEEeeeccccccccceeeeeccccccceeeeecccccCcceeEeecc Confidence 33332222222211111111111212211111111111111111122222223333455666777888899888887766 Q ss_pred ccccccccccceecccceecccceeEEEecccccccceeeeccCCcceeeEeeeecccccccccchhhhhhhhcCCCceE Q lcl|Aclame:pro 241 KTAFNSGAQQTIYPFGGTRTSNARGVIQYGPMTDDQFAIIVRRDGIVVESTVLSTRKGDRDVYGSNIFMDDYFRNGGSNF 320 (663) Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ 320 (663) .............................++..++.+.+++...+...+++.++..++.+...+...++.+.+.++.+.+ T Consensus 241 ~~~~~~~~~~~v~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~e~~~ls~~~~~~~~~~~~~~~~~~~~~~~s~~ 320 (663) T protein:vir:10 241 KTAFQSGAAQPIYPFGGTRASNARSVIQYGPMTDDQFAIIVRRDGIVVESTVLSTRRGDRDVYGNNIFMDDYFRNGSSNF 320 (663) T ss_pred cccccccceeeecccCcccccccccccccccccchhhcccccCCCcccceeeeeccccccccchhhhhhhhhhcCcccce Confidence 55554444444444444444445555666777788888888888999999999999888888888878888888888888 Q ss_pred EEEeecccCCccceeEEecCcccccccccchhhhHHHHHhhhhccccceeEEeeccCcCChhHHHHHHHHHHHHHHhhCC Q lcl|Aclame:pro 321 IFASSEGWPAGFTGIIQLGGGTSANADVGADELIKGWDLFSDREALHVNLMIAGACGSDGAEIASTVQKYVVSLADDRQD 400 (663) Q Consensus 321 v~~~~~~~~~~~~~~~~l~gg~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 400 (663) +.+.....+.......++.+|.++....+..+++++++.+...+.++..++++++...+......+++++|+.||+++++ T Consensus 321 v~~~~~~~~~~~~~~~~l~gg~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~i~~~~~~~~~~~~~~v~~~l~~~~~~~~~ 400 (663) T protein:vir:10 321 IYASSVNWPAGFTGIIQLGGGASANNAVGSDELIAGWDLFADREALHVNLMIAGACKSDGVAVASTVQKHVVALADDRQD 400 (663) T ss_pred eEeeccccCcccceeEEecccccCcccchhhhhhhHHhhhccccccCceEEEeecCCCCchhhHHHHHHHHHHHHHhhCC Confidence 88888887777777889999998877788899999999998888888888888887777777888999999999999999 Q ss_pred eEEEecccccccccccccccHHHHHHHHhhcccccchhhhccCcCcceEEEecCceeecccccCceeEechHHHHHHHHH Q lcl|Aclame:pro 401 CVAIVNPPAELMVGIPTSTAVKNIVEWRNGMTGSGEVVDNNMNISSTYAFIIGNYKYQYDKYNDINRWVPLAADIAGLCA 480 (663) Q Consensus 401 ~~~i~d~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~p~~~~~d~~~~~~~~~p~s~~~AG~~a 480 (663) ||+|+|+|.+...........+++++|+............+.+++|+|+++||||++++|+.+++.+++||||++||+|| T Consensus 401 ~~ai~d~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~p~~~~~d~~~~~~~~~p~s~~vAGl~A 480 (663) T protein:vir:10 401 CVAFVNPPSELLVGVPTTQAVKNIVEWRNGVTTGGEVVDNNMNISSTYAFISGNYKYQYDKYNDINRWVPLSADIAGLCA 480 (663) T ss_pred EEEEEecCcccccccchhhhHHHHHHHhhhccccchhhhhhcccCcceEEEEecceeEecccCCceEEechHHHHHHHHH Confidence 99999999999888888889999999999999889999999999999999999999999999999999999999999999 Q ss_pred hhhhccCceecccceecceeecceeeeeecChhhhhhhhhCCceEEEEeeCCCcEEEEcceecCCCCccceeeehhhHHH Q lcl|Aclame:pro 481 YTDQVSHPWMSPAGYRRGQIRNCIKLAIEPKQSMRDTMYQVAINPVTGFAGGDGFVLFGDKMATQVPSPFDRINVRRLFN 560 (663) Q Consensus 481 ~~d~~~g~~~span~~~~~i~~~~~~~~~~~~~~~~~Ln~~~in~i~~~~~~~G~~~wG~rT~~~~~~~~~~i~vrR~~~ 560 (663) |+|.++||||||+|+++++|+|++++.+.+++.|++.||++|||+|++|++.+||++||+||+++++++|+|||+||||+ T Consensus 481 r~D~~~g~~~span~~~~~i~g~~~~~~~~~~~~~~~Ln~~gin~i~~~~~~~G~~~wG~rT~s~~~s~~~~i~vrR~~~ 560 (663) T protein:vir:10 481 YTDQVGHPWMSPAGYRRGQLRNTIKLAIEPKQSLRDTMYQVSINPVTGFAGGDGFVLFGDKMATQVPSPFDRINVRRLFN 560 (663) T ss_pred HhhccCCcEEccCCeeecceeccccceeecCchhHHHHHhCCCcEEEEeeCCCcEEEEcccccCCCCcccceEehhhHHH Confidence 99999999999999999999999999999999999999999999999999878999999999999988999999999999 Q ss_pred HHHHHHHHHHHHhhcccCCHHHHHHHHHHHHHHHHHHHhcCceEEEEEEEccCCCCHHHhhCCEEEEEEEEEecCcceEE Q lcl|Aclame:pro 561 MLKKNIGDTSKYELFENNDAFTRQSFRMETSQYLDGIRSLGGCYDFRVVCDTTNNTPNVIDRNEFVGTIYVKPPRSINYI 640 (663) Q Consensus 561 ~i~~~~~~~~~~~v~epn~~~~~~~v~~~i~~~L~~l~~~gal~g~~v~~d~~~nt~~~i~~G~~~~~i~~~p~~p~e~i 640 (663) ||+++|+++++|+|||||++.||++|+++|++||++||++|+|.||+|+||+++||++||++|+|+++|+++|++|+||| T Consensus 561 ~i~~si~~~~~~~v~epn~~~l~~~i~~~i~~~L~~l~~~gal~gf~V~~d~~~nt~~~i~~G~~~~~i~~~p~~pae~I 640 (663) T protein:vir:10 561 MLKKNIGDTSKYELFENNDAFTRQSFRMEVSQYLDNIRSLGGVYDFRVVCDTTNNTPQVIDSNEFVATIYIKAPRSINYI 640 (663) T ss_pred HHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeEEEEcCCCCCHHHhhCCeEEEEEEEEecCCcceE Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred EEEEEEeecccchhhhhhhhhcC Q lcl|Aclame:pro 641 TLNMVATSTGANFDELIGPMQLA 663 (663) Q Consensus 641 ~~~~~~~~~~~~~~e~~~~~~~~ 663 (663) +|||+|++.+++|+|+++++||| T Consensus 641 ~~~~~~~~~~~~f~e~~~~~~~~ 663 (663) T protein:vir:10 641 TLNFVATSTGANFDELIGPAQLA 663 (663) T ss_pred EEEEEEEecCccHHHHHHHHhcC Confidence 99999999999999999999999 No 4 >protein:vir:6894 Length: 660 # NCBI annotation: gp18 tail sheath protein # Family: family:all:661 # MgeID: mge:140 # MgeName: RB69 # Cross-refs: genbank:acc:NP_861870;genbank:gi:32453661;genbank:GeneID:1494296 Probab=100.00 E-value=1.6e-160 Score=896.68 Aligned_cols=658 Identities=61% Similarity=1.057 Sum_probs=527.0 Q ss_pred CceecCceEEEEecCCCcccccCCCceEEEeecccCCCCcceEeCCHHHHHHHcCCcCCCchhHHHHHHHHhcCCceEEE Q lcl|Aclame:pro 1 MALLSPGIEMKETSINSTVVRSATGRAAIVGKFAWGPAYEVRQVTNEVELVDMFGSPDNVTAPYFMSAMNFLQYGNDLRL 80 (663) Q Consensus 1 ~~~~~PGVyveEv~~~~~i~~v~Ts~~afvG~~~~Gpv~~p~~i~s~~e~~~~FG~~~~~~~~~~~~~~~F~nGG~~~~v 80 (663) |+|+||||||||++++++|++|+|||+||||+|+|||+|+|++|+||.||+|.||++.+.+|++|++++||+|||++||| T Consensus 1 ~~~~~PgVyv~e~~~~~~i~~v~ts~~~fvG~~~~Gp~~~p~~i~s~~~~~~~fG~~~~~~~~~~~~~~~f~~~g~~~~v 80 (660) T protein:vir:68 1 MALLSPGVELKETTVQSTVVNNSTGTAALAGKFQWGPAFQIKQITDEVALVDMFGTPNTDTADYFMSAMNFLQYGNDLRV 80 (660) T ss_pred CccccCceEEEEecCCcccccCCCcceeEEecccCCCCccCEEecCHHHHHHhcCCccCccchhHHHHHHHHhCCCeEEE Confidence 99999999999998777899999999999999999999999999999999999999999999999999999999999999 Q ss_pred EEeccccccccccccccceeeeeccccccccccccccccccccccccceeeeeeecccceeeeeecccchhccccccccc Q lcl|Aclame:pro 81 VRVIDMEKAKNASPLVNQVSVTITTEGQGYTVGDAITVKYNNATITEAGKVTAVDSDGKIKSLFVPTAEIIAKTRQLGTY 160 (663) Q Consensus 81 vRv~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~v~~~~~~g~~~~~~~~~~~~~~~~~~~~t~ 160 (663) ||+++...++++....+.+..+...++....+++.+.+............+.....++........+............. T Consensus 81 vRv~~~~~~~~~~~~~~~~~~t~~~~g~~~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ta~~~~~a~~~~~~ 160 (660) T protein:vir:68 81 VRAVDRDTAKNSSPVAGNINFTISSAGTNYRVGDKVVVKYSTDIIEPDGEVTSVDSDGKILNIFIPSGKIIAKAKEIGEY 160 (660) T ss_pred EEecccccccccccccccceeeeeccCcceeeeeeeeeecccccccccccceeeeecCceeeeeeccccccccceeeccc Confidence 99998888877777777788888888777777877777655443333344444444444443333333322223333333 Q ss_pred ccceeceeeeecccccceeeeeecccccccccccccccccccccccccccccccccccccceeeecchhhcccccccccc Q lcl|Aclame:pro 161 PTLGDNWRIDVSGASGGSAAALALGNIVVDSGVTFGNSEDAPAVMTSPAVMEKYAKFGMPLISAVYPGEIGSTVEVEIVS 240 (663) Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~g~~g~~v~v~~~~ 240 (663) +............................+.................................+...+.+|+.+++.+.. T Consensus 161 ~~~~~~~~~~v~~~~~~~~~~~~v~~~~~d~~~~~~~~~ta~~~~~~~~~~~~~~~~~~~~~~A~~~g~~G~~i~v~~~~ 240 (660) T protein:vir:68 161 PELGSNWTAEMSGSSSGLSAVITIDSVVMDSGILLTEVETSEEAITSLTFQESIKKYGVPGVVALYPGELGDQLEIEIVS 240 (660) T ss_pred cccccceeEEeecccccceeeeeeccccccccceeeeeccccccccccceeeeecccCccccccccccccccceEEEEec Confidence 33333322222222222111222222222222111111111111111222222223344455667778888888877654 Q ss_pred ccccccc--cccceecccceecccceeEEEecccccccceeeeccCCcceeeEeeeecccccccccchhhhhhhhcCCCc Q lcl|Aclame:pro 241 KTAFNSG--AQQTIYPFGGTRTSNARGVIQYGPMTDDQFAIIVRRDGIVVESTVLSTRKGDRDVYGSNIFMDDYFRNGGS 318 (663) Q Consensus 241 ~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s 318 (663) ....... ............+.....+....+..++.+++++..++...+.+.++...+.+.......+..+.+.++.+ T Consensus 241 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (660) T protein:vir:68 241 KADYDKGASAQLKIYPDGGTRYSTAKAIFGYGPQTDDQYAIIVRRNDSVVQSVVLSTKRGERDIYGSNIFIDDFFAKGAS 320 (660) T ss_pred cccccccccccceeeecccccccceeeEeecccccccceeeeeecCCcceeeeeeecccccccccccceeeehhhccCcc Confidence 4333222 22222333344445555666667777888888888888888999888888887777777777788878888 Q ss_pred eEEEEeecccCCccceeEEecCcccccccccchhhhHHHHHhhhhccccceeEEeeccCcCChhHHHHHHHHHHHHHHhh Q lcl|Aclame:pro 319 NFIFASSEGWPAGFTGIIQLGGGTSANADVGADELIKGWDLFSDREALHVNLMIAGACGSDGAEIASTVQKYVVSLADDR 398 (663) Q Consensus 319 ~~v~~~~~~~~~~~~~~~~l~gg~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 398 (663) .++.+.....+....+..++.||.++.......++..+++.+...+.+.+.++++++......++..+++.+|++||+++ T Consensus 321 ~~v~~~~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~v~~~l~~~~~~~ 400 (660) T protein:vir:68 321 NYIFATAQGWPKGFSGVIKLNGGLSSNETVEAGDLMEAWDLFADRESVNAQLFIAGSCAGESLEVASTVQKHVVAIGDSR 400 (660) T ss_pred cEEEEeecCCCccccceeeeccccccccccccchhhhHHHHhhhhhccccceeeccccCCCchHHHHHHHHHHHHHHHhh Confidence 88888887777777777889999888777778888999999999999999999988888888888889999999999999 Q ss_pred CCeEEEecccccccccccccccHHHHHHHHhhcccccchhhhccCcCcceEEEecCceeecccccCceeEechHHHHHHH Q lcl|Aclame:pro 399 QDCVAIVNPPAELMVGIPTSTAVKNIVEWRNGMTGSGEVVDNNMNISSTYAFIIGNYKYQYDKYNDINRWVPLAADIAGL 478 (663) Q Consensus 399 ~~~~~i~d~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~p~~~~~d~~~~~~~~~p~s~~~AG~ 478 (663) ++||+++|+|.......+...+.+++++||+..+.. .....+++|+|+++||||++++|+.++..+++||||++||+ T Consensus 401 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~s~~~~~~~p~~~~~d~~~~~~~~~p~sg~~AGl 477 (660) T protein:vir:68 401 QDCLVLCSPPRAAVVGIPVNRAVDNLVDWRTASGTY---TDNNFNISSTYAAIDGNYKYQYDKYNDVNRWVPLAADIAGL 477 (660) T ss_pred CCeEEEEcccceeEecCCCCCCHHHHHHHHhhcccc---cccccccCcceEEEEcCceEEecccCCceEEechhHHHHHH Confidence 999999999998888888888999999999875432 33456789999999999999999999999999999999999 Q ss_pred HHhhhhccCceecccceecceeecceeeeeecChhhhhhhhhCCceEEEEeeCCCcEEEEcceecCCCCccceeeehhhH Q lcl|Aclame:pro 479 CAYTDQVSHPWMSPAGYRRGQIRNCIKLAIEPKQSMRDTMYQVAINPVTGFAGGDGFVLFGDKMATQVPSPFDRINVRRL 558 (663) Q Consensus 479 ~a~~d~~~g~~~span~~~~~i~~~~~~~~~~~~~~~~~Ln~~~in~i~~~~~~~G~~~wG~rT~~~~~~~~~~i~vrR~ 558 (663) |||+|.++||||||+|+++++|.|++++++.++++|++.||++|||+||.|++ +|+++||+||+++++++||||||||| T Consensus 478 ~Ar~d~~~g~~~span~~~~~i~g~~~~~~~~~~~~~~~Ln~~gIn~i~~~~~-~G~~~wG~rT~~~~~s~~~~i~vrR~ 556 (660) T protein:vir:68 478 CARTDNISQPWMSPAGYNRGQILNVIKLAIETRQAQRDRLYQEAINPVTGTGG-DGYVLYGDKTATSVPSPFDRINVRRL 556 (660) T ss_pred HHHHhccCCcEEccCCeeeceeeccceeeecCChhHHHHHhhCCceEEEEecC-CeEEEEcceecCCCCcccceEehhhH Confidence 99999999999999999999999999999999999999999999999999997 79999999999999889999999999 Q ss_pred HHHHHHHHHHHHHHhhcccCCHHHHHHHHHHHHHHHHHHHhcCceEEEEEEEccCCCCHHHhhCCEEEEEEEEEecCcce Q lcl|Aclame:pro 559 FNMLKKNIGDTSKYELFENNDAFTRQSFRMETSQYLDGIRSLGGCYDFRVVCDTTNNTPNVIDRNEFVGTIYVKPPRSIN 638 (663) Q Consensus 559 ~~~i~~~~~~~~~~~v~epn~~~~~~~v~~~i~~~L~~l~~~gal~g~~v~~d~~~nt~~~i~~G~~~~~i~~~p~~p~e 638 (663) |+||+++|+++++|+||||||+.||++|+++|++||++||++|+|.||+|+||+++||++||++|+|+|+|+++|++|+| T Consensus 557 ~~~i~~si~~~~~~~v~epn~~~~~~~i~~~i~~~L~~l~~~gal~gf~V~~d~~~nt~~~i~~G~~~~~i~~~p~~pae 636 (660) T protein:vir:68 557 FNMVKTNIGSASKYRLFELNNAFTRSSFRTETSQYLQGIKALGGVYNFKVVCDTTNNTPAVIDRNEFVATFYLQPARSIN 636 (660) T ss_pred HHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhcCceeeeEEEEecCCCCHHHhhCCeEEEEEEEEecCCcc Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred EEEEEEEEeecccchhhhhhhhhc Q lcl|Aclame:pro 639 YITLNMVATSTGANFDELIGPMQL 662 (663) Q Consensus 639 ~i~~~~~~~~~~~~~~e~~~~~~~ 662 (663) ||+|||+|++++.+|+|++++|.. T Consensus 637 ~i~l~~~~~~~~~~~~e~~~~v~~ 660 (660) T protein:vir:68 637 YITLNFVATATGADFDELIGAVGG 660 (660) T ss_pred eEEEEEEEeecCccHHHHHHhhcC Confidence 999999999999999999999999 No 5 >protein:vir:106427 Length: 679 # NCBI annotation: gp18 tail sheath protein # Family: family:all:661 # MgeID: mge:1474 # MgeName: Aeh1 # Cross-refs: genbank:acc:NP_944106;genbank:gi:38640150;genbank:GeneID:2658188 Probab=100.00 E-value=1.6e-160 Score=896.60 Aligned_cols=660 Identities=52% Similarity=0.929 Sum_probs=515.3 Q ss_pred CceecCceEEEEecCCCcccccCCCceEEEeecccCCCCcceEeCCHHHHHHHcCCcCCCchhHHHHHHHHhcCCceEEE Q lcl|Aclame:pro 1 MALLSPGIEMKETSINSTVVRSATGRAAIVGKFAWGPAYEVRQVTNEVELVDMFGSPDNVTAPYFMSAMNFLQYGNDLRL 80 (663) Q Consensus 1 ~~~~~PGVyveEv~~~~~i~~v~Ts~~afvG~~~~Gpv~~p~~i~s~~e~~~~FG~~~~~~~~~~~~~~~F~nGG~~~~v 80 (663) |+|+||||||||+++++.|++|+||++||||+|+|||+|+|++|+||.||+++||++++.+|++|++++||+|||++||| T Consensus 1 ~~~~~Pgvyv~e~~~~~~i~~~~t~~~~~vg~~~~gp~~~p~~i~s~~~~~~~fg~~~~~~~~~~~~~~~f~~gg~~~~v 80 (679) T protein:vir:10 1 MTLLSPGVETKEINLQTTIARSSTGRAALVGKFNWGPAYQISQVVSEVDLVDKFGRPDDQTADSFFSGVNFLNYGNDLRL 80 (679) T ss_pred CceecCceEEEeecCCcccccCccccceeeecccCCCCccCEEecCHHHHHHHcCCcccccchHHHHHHHHHhCCCeEEE Confidence 99999999999998767799999999999999999999999999999999999999999999999999999999999999 Q ss_pred EEeccccccccccccccceeeeeccccccccccccccccccccccccceeeeeeecccceeeeeecccchhccccccccc Q lcl|Aclame:pro 81 VRVIDMEKAKNASPLVNQVSVTITTEGQGYTVGDAITVKYNNATITEAGKVTAVDSDGKIKSLFVPTAEIIAKTRQLGTY 160 (663) Q Consensus 81 vRv~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~v~~~~~~g~~~~~~~~~~~~~~~~~~~~t~ 160 (663) |||.++...+++....+.+..+...++....+++.+++...... .....+...+..+.....+................ T Consensus 81 vrv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~s~-~~~~~~~~~~~~~~~~~~~v~~~~~~~~a~~~~~~ 159 (679) T protein:vir:10 81 VRVLNETKSRNSSALYQSLSYTITSPGVDYKVGDVVNVLQGGNV-IATGKVTVVNASGGIVAFYVPTAAIIDKAKSLNDY 159 (679) T ss_pred EEccCcccccccccccccccccccccccccccccceeeeeCCCc-ccceeEEEeeccCceeeeeeccccccccccccccc Confidence 99999888888777777888888888887778888776554322 22233333344444333333332222222222222 Q ss_pred ccceeceeeeeccccc--ceeeeeecccccccccccccccccccc-----cccccccccccccccccceeeecchhhccc Q lcl|Aclame:pro 161 PTLGDNWRIDVSGASG--GSAAALALGNIVVDSGVTFGNSEDAPA-----VMTSPAVMEKYAKFGMPLISAVYPGEIGST 233 (663) Q Consensus 161 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~a~~~g~~g~~ 233 (663) +.+............. .......+.....+............. ................+...+..++.+++. T Consensus 160 ~~l~~a~~~~~~~~t~~~g~~~~~~v~~v~~~~~~~~~~~~~a~~~i~~~~~~~~t~~~~~~~~~~~~~~A~~~g~~gn~ 239 (679) T protein:vir:10 160 PALDNAWQIQFAAGGPGAGQAATATVVGINLDSTIFVPNDEYAMSAISERSETKRTFIDICEEMKVPAIVARYAGTYGDN 239 (679) T ss_pred ceecccceeeeeeccccccceeeeeeeeeccCCceeeccccccccccccccccchhhhhhhhccccceeeeecccccCCc Confidence 2222221111111111 111111111111111111111111110 011111222222334455566677778877 Q ss_pred cccccccccccccccccce---------eccc---ceecccceeEEEecccccccceeeeccCCcceeeEeeeecccccc Q lcl|Aclame:pro 234 VEVEIVSKTAFNSGAQQTI---------YPFG---GTRTSNARGVIQYGPMTDDQFAIIVRRDGIVVESTVLSTRKGDRD 301 (663) Q Consensus 234 v~v~~~~~~~~~~~~~~~~---------~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 301 (663) +.+................ .... .............+......+.+++...+...+.+.++..++... T Consensus 240 i~v~~va~~~~~~~~~~~a~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvv~~~g~~~~~~~~~~~~~~~~ 319 (679) T protein:vir:10 240 IKVLMIAYKDYYKFNEAGKIVSVNTINPKVFPTGLDYGNVTPSSYLEFGPQNESQFAFIVFNNGVAVESKILSTKPGDRD 319 (679) T ss_pred ceEEEEeecccccccccccccccccccccccccccccccceeeeecccccccccceeeEEecccccccceeeeccccccc Confidence 7665443222111100000 0000 000111111222234445566777777777888888887777777 Q ss_pred cccchhhhhhhhcCCCceEEEEeecccCCccceeEEecCcccccccccchhhhHHHHHhhhhccccceeEEeeccCcCCh Q lcl|Aclame:pro 302 VYGSNIFMDDYFRNGGSNFIFASSEGWPAGFTGIIQLGGGTSANADVGADELIKGWDLFSDREALHVNLMIAGACGSDGA 381 (663) Q Consensus 302 ~~~~~~~~~~~~~~~~s~~v~~~~~~~~~~~~~~~~l~gg~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 381 (663) ......++.+.+.++.+.++.......+......+.+.||.++.......++..++..+...+.+.++++++|+...... T Consensus 320 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~p~~~~~~~ 399 (679) T protein:vir:10 320 IYGTSIYINEYFGNGYSSFVQGVAESWPVGYTGVLAFGGGQSSNTDISAAEFMKGWDMFADREHTDVNLFIAGAVAGEGA 399 (679) T ss_pred ccchhhhhhhhhcCcccceeeeccccccccccceeeccCCccCCCccchhhhhhhhhhhhcccccccceEEecCCCCCch Confidence 77777777777778888888887777777777888999999887777778888888888888888899999999888777 Q ss_pred hHHHHHHHHHHHHHHhhCCeEEEecccccccccccccccHHHHHHHHhhcccccchhhhccCcCcceEEEecCceeeccc Q lcl|Aclame:pro 382 EIASTVQKYVVSLADDRQDCVAIVNPPAELMVGIPTSTAVKNIVEWRNGMTGSGEVVDNNMNISSTYAFIIGNYKYQYDK 461 (663) Q Consensus 382 ~~~~~~~~~~~~~~~~~~~~~~i~d~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~p~~~~~d~ 461 (663) +...+++++|++||+++++||+|+|+|.+.........+.+++++||......+.......+++|+|+++||||++++|+ T Consensus 400 ~~~~~v~~~l~~~~~~~~~~~ai~d~p~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~s~~~~~~~p~~~~~d~ 479 (679) T protein:vir:10 400 QIASTVQKAVVAIADERRDCLVLISPPREYMINQPAASVVRKLVDWRRGVNQAGISLDDNMNIGTTYASVDGNYKYQYDK 479 (679) T ss_pred hhhHHHHHHHHHHHHhhCCeEEEEeccccccccccccchHHHHHHHHhhcccccchhhhhhccCcceEEEEccceeeecc Confidence 78889999999999999999999999999888888889999999999999888888888999999999999999999999 Q ss_pred ccCceeEechHHHHHHHHHhhhhccCceecccceecceeecceeeeeecChhhhhhhhhCCceEEEEeeCCCcEEEEcce Q lcl|Aclame:pro 462 YNDINRWVPLAADIAGLCAYTDQVSHPWMSPAGYRRGQIRNCIKLAIEPKQSMRDTMYQVAINPVTGFAGGDGFVLFGDK 541 (663) Q Consensus 462 ~~~~~~~~p~s~~~AG~~a~~d~~~g~~~span~~~~~i~~~~~~~~~~~~~~~~~Ln~~~in~i~~~~~~~G~~~wG~r 541 (663) .+++.+++||||++||+|||+|.++||||||+|+++++|.|++++++.+++.|++.||++|||+|++|++ +|+++||+| T Consensus 480 ~~~~~~~~p~sg~vAGl~Ar~D~~~g~~~sPan~~~~~i~g~~~~~~~~~~~~~~~Ln~~gin~i~~~~g-~G~~~wG~r 558 (679) T protein:vir:10 480 YNDVNRWIPLAADIAGLCARTDTVGQPWQSPAGFNRGQIVNVIKLAVDTRQAHRDEMYTNGINPIVGFAG-QGYILYGDK 558 (679) T ss_pred cCCceEEechHHHHHHHHHHhhccCCcEECcCCeeeccccccccceeecChhhHHhhhhCCceEEEEecC-CeEEEEccc Confidence 9999999999999999999999999999999999999999999999999999999999999999999997 799999999 Q ss_pred ecCCCCccceeeehhhHHHHHHHHHHHHHHHhhcccCCHHHHHHHHHHHHHHHHHHHhcCceEEEEEEEccCCCCHHHhh Q lcl|Aclame:pro 542 MATQVPSPFDRINVRRLFNMLKKNIGDTSKYELFENNDAFTRQSFRMETSQYLDGIRSLGGCYDFRVVCDTTNNTPNVID 621 (663) Q Consensus 542 T~~~~~~~~~~i~vrR~~~~i~~~~~~~~~~~v~epn~~~~~~~v~~~i~~~L~~l~~~gal~g~~v~~d~~~nt~~~i~ 621 (663) |+++++++|+|||+||||+|||++|+++++|+||||||+.||.+|+++|++||++||++|+|.||+|+||+++||++||+ T Consensus 559 T~~~~~s~~~~i~vrR~~~~i~~si~~~~~~~v~epn~~~~~~~i~~~i~~fL~~l~~~gal~gf~v~~d~~~nt~~~i~ 638 (679) T protein:vir:10 559 TASQAPTPFDRINVRRLFNLLKKSISESAKYKLFELNDAFTRSSFRSEVGSYLDTIRSLGGIYDFRVVCDESNNTPAVID 638 (679) T ss_pred ccCCCCcccceEehhhHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeEEEEcCCCCCHHHhh Confidence 99999889999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred CCEEEEEEEEEecCcceEEEEEEEEeecccchhhhhhhhhc Q lcl|Aclame:pro 622 RNEFVGTIYVKPPRSINYITLNMVATSTGANFDELIGPMQL 662 (663) Q Consensus 622 ~G~~~~~i~~~p~~p~e~i~~~~~~~~~~~~~~e~~~~~~~ 662 (663) +|+|+++|+++|++|||||+|||+|++++++|+|++++||| T Consensus 639 ~G~~~~~i~~~p~~pae~i~~~~~~~~~~~~~~e~~~~~~~ 679 (679) T protein:vir:10 639 RNEFVATILIKPARSINYITLSFVATSTGADFDELVGSFQQ 679 (679) T ss_pred CCeEEEEEEEEecCCccEEEEEEEEeecCccHHHHHHHhcC Confidence 99999999999999999999999999999999999999999 No 6 >protein:vir:98263 Length: 664 # NCBI annotation: gp18 tail sheath monomer # Family: family:all:661 # MgeID: mge:1667 # MgeName: RB43 # Cross-refs: genbank:acc:YP_239196;genbank:gi:66391671;genbank:GeneID:3416365 Probab=100.00 E-value=3.9e-160 Score=894.54 Aligned_cols=661 Identities=62% Similarity=1.068 Sum_probs=531.5 Q ss_pred CceecCceEEEEecCCCcccccCCCceEEEeecccCCCCcceEeCCHHHHHHHcCCcCCCchhHHHHHHHHhcCCceEEE Q lcl|Aclame:pro 1 MALLSPGIEMKETSINSTVVRSATGRAAIVGKFAWGPAYEVRQVTNEVELVDMFGSPDNVTAPYFMSAMNFLQYGNDLRL 80 (663) Q Consensus 1 ~~~~~PGVyveEv~~~~~i~~v~Ts~~afvG~~~~Gpv~~p~~i~s~~e~~~~FG~~~~~~~~~~~~~~~F~nGG~~~~v 80 (663) |+|+||||||||++.+.+|++|+||++||||+|+|||+|+|++|+||.||+|.||++++.+|++|++++||+|||++||| T Consensus 1 ma~~~PgVyv~E~~~~~~i~~~~ts~~~~vG~~~~Gp~~~p~~i~s~~d~~~~fG~~~~~~~~~~~v~~~f~ngg~~~~v 80 (664) T protein:vir:98 1 MALQSPGIETKETSVQSTVVRNSTGRAAIVGKFSWGPAYQIRQISNEVELVNYFGAPDNLTADYFMSAVNFLQYGNDLRL 80 (664) T ss_pred CceecCceEEEecCCCcccccccccceEEEeeccCCCCCccEEecCHHHHHHhcCCccccchhHHHHHHHHHhcCCeEEE Confidence 99999999999998766799999999999999999999999999999999999999999999999999999999999999 Q ss_pred EEeccccccccccccccceeeeeccccccccccccccccccccccccceeeeeeecccceeeeeecccc--hhccccccc Q lcl|Aclame:pro 81 VRVIDMEKAKNASPLVNQVSVTITTEGQGYTVGDAITVKYNNATITEAGKVTAVDSDGKIKSLFVPTAE--IIAKTRQLG 158 (663) Q Consensus 81 vRv~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~v~~~~~~g~~~~~~~~~~~--~~~~~~~~~ 158 (663) |||.+....+++....+.+.++...++.....++.+++....+..............++.......... ......... T Consensus 81 vRv~~~~~~~~a~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~gn~~~v~i~~~~~~~~~~~~~~~ 160 (664) T protein:vir:98 81 VRVVDKDAAKNASAIFNQIKTTIASQGSNYNVGDVIKVKYSNTVVEENGKVTQVDSNGKILAVTIPKRKKSLLVLNRSVL 160 (664) T ss_pred EEecCccccccccccccccceeeccCCcccccccceeEeecCcccccceeeccCCCCCceeeEeeccCccceeecccccc Confidence 999998888888888888888888888777788877776555444444333333444443333222111 111011100 Q ss_pred ccccceeceeeeecccccceeeeeecccccccccccccccccccccccccccccccccccccceeeecchhhcccccccc Q lcl|Aclame:pro 159 TYPTLGDNWRIDVSGASGGSAAALALGNIVVDSGVTFGNSEDAPAVMTSPAVMEKYAKFGMPLISAVYPGEIGSTVEVEI 238 (663) Q Consensus 159 t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~g~~g~~v~v~~ 238 (663) ....... .......................+.............................+...+..++.+|+.+++.+ T Consensus 161 ~~~~~~~-~~~s~~~~s~g~a~a~~v~~v~~d~~~~~~~~~~a~~~i~~~~~~~~~~~~~~~~~~a~~~G~~Gn~isv~i 239 (664) T protein:vir:98 161 TQIFLLV-GTTEIVSQSSGVSASITIDGIESDSGITLLNLDIAKETIQGTSFQTLTQKYQIPSVVALYPGELGSTVQVEI 239 (664) T ss_pred cccceec-ccceeeeeecccceeeecccccccceeeccccceeeeccccccceeeeeccccceeeeeecccccceeeeee Confidence 0000000 000001111111111112222222222221111111112222222233344556677788899999999888 Q ss_pred ccccccccccccceecccceecccceeEEEecccccccceeeeccCCcceeeEeeeecccccccccchhhhhhhhcCCCc Q lcl|Aclame:pro 239 VSKTAFNSGAQQTIYPFGGTRTSNARGVIQYGPMTDDQFAIIVRRDGIVVESTVLSTRKGDRDVYGSNIFMDDYFRNGGS 318 (663) Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s 318 (663) .++............................++..++.+.+++..++...+++.++...+.+.......+....+.++.+ T Consensus 240 ~s~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (664) T protein:vir:98 240 ISKAAYDTGAMISGYPSGISVKNSGRSVMTYGPQTDNQYAFVVRRGGIVQESFIVSTDKTDKDIYGVNIYMDDFFANGGS 319 (664) T ss_pred cccccccCcceEeeccCceecccceeeeeeccccCccceeEEEecCCceeeeEEeecccCcccceeeeeechhheecccc Confidence 77666555554555555555666667777788888889999999999999999888888777766666666666667777 Q ss_pred eEEEEeecccCCccceeEEecCcccccccccchhhhHHHHHhhhhccccceeEEeeccCcCChhHHHHHHHHHHHHHHhh Q lcl|Aclame:pro 319 NFIFASSEGWPAGFTGIIQLGGGTSANADVGADELIKGWDLFSDREALHVNLMIAGACGSDGAEIASTVQKYVVSLADDR 398 (663) Q Consensus 319 ~~v~~~~~~~~~~~~~~~~l~gg~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 398 (663) .++.+.....+........+.++.+.....+..+...++..|++.++++++++++|+..+.+.+...+++.+|++||+++ T Consensus 320 ~~~~~~~~~~~~~~~~~~~~~gg~~~~~~~g~~~~~tgl~~l~~~~~~~~~ll~~p~~~~~~~~~~~~v~~al~~~a~~~ 399 (664) T protein:vir:98 320 QYVFGTSMNWPKGFSGILEFGGGLSSNDTVGADELMTGWDMFADREALHVPLLIAGGCAGESVEIASTVQKHVISIGDER 399 (664) T ss_pred eeeeeecccCCcccceeEeccCccccccccCchhHHHHHHhhhcccccccceEEecCCCCCcHHHHHHHHHHHHHHHHhc Confidence 77777777777777777888888887666777788888999988888899999999998888888889999999999999 Q ss_pred CCeEEEecccccccccccccccHHHHHHHHhhcccc-cchhhhccCcCcceEEEecCceeecccccCceeEechHHHHHH Q lcl|Aclame:pro 399 QDCVAIVNPPAELMVGIPTSTAVKNIVEWRNGMTGS-GEVVDNNMNISSTYAFIIGNYKYQYDKYNDINRWVPLAADIAG 477 (663) Q Consensus 399 ~~~~~i~d~p~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~s~~~~~~~p~~~~~d~~~~~~~~~p~s~~~AG 477 (663) ++||+++|+|...........+.+++++|++..... ........+++|+|+++||||++++|+.++..+++||||++|| T Consensus 400 ~~~~a~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~p~~~~~d~~~~~~~~~p~sg~~AG 479 (664) T protein:vir:98 400 QDCTVFVSPPRSLLVNIPLATAVDNIVEWRTGYKISGGTPVDNNLNVSSSYGFLDGNYKYQYDKYNDVNRWVPLAGDIAG 479 (664) T ss_pred CCeEEEEccccceeccCCccccHHHHHHHhhhccccccchhhhhcCCccceEEEEcCeEEEecccCCceEEechHHHHHH Confidence 999999999998888888889999999999875433 3445567789999999999999999999999999999999999 Q ss_pred HHHhhhhccCceecccceecceeecceeeeeecChhhhhhhhhCCceEEEEeeCCCcEEEEcceecCCCCccceeeehhh Q lcl|Aclame:pro 478 LCAYTDQVSHPWMSPAGYRRGQIRNCIKLAIEPKQSMRDTMYQVAINPVTGFAGGDGFVLFGDKMATQVPSPFDRINVRR 557 (663) Q Consensus 478 ~~a~~d~~~g~~~span~~~~~i~~~~~~~~~~~~~~~~~Ln~~~in~i~~~~~~~G~~~wG~rT~~~~~~~~~~i~vrR 557 (663) +|||+|.++||||||+|+++++|.|++++.+.+++.|++.||++|||||++|++.+||++||+||+++++++|+|||+|| T Consensus 480 l~A~~D~~~g~~~span~~~~~i~g~~~~~~~~~~~~~~~Ln~~gIn~i~~~~~~~G~~~wG~rT~~~~~s~~~~i~vrR 559 (664) T protein:vir:98 480 LCVYTDSVANPWMSPAGYNRGQIRNCIKLAIEPRTAHRDAMYQVQINPVTGFAGGSGFVLYGDKTLTSVPSPFDRINVRR 559 (664) T ss_pred HHHHhhhcCCcEECcCCceeeeeeccccceeecChhhHHHHHhCCCeEEEEeeCCCcEEEEcccccCCCCcccceEeehh Confidence 99999999999999999999999999999999999999999999999999999878999999999998888999999999 Q ss_pred HHHHHHHHHHHHHHHhhcccCCHHHHHHHHHHHHHHHHHHHhcCceEEEEEEEccCCCCHHHhhCCEEEEEEEEEecCcc Q lcl|Aclame:pro 558 LFNMLKKNIGDTSKYELFENNDAFTRQSFRMETSQYLDGIRSLGGCYDFRVVCDTTNNTPNVIDRNEFVGTIYVKPPRSI 637 (663) Q Consensus 558 ~~~~i~~~~~~~~~~~v~epn~~~~~~~v~~~i~~~L~~l~~~gal~g~~v~~d~~~nt~~~i~~G~~~~~i~~~p~~p~ 637 (663) ||+||+++|+++++|+|||||++.||++|+.+|+.||++||++|+|.||+|+||+++||++||++|+|+++|+++|++|+ T Consensus 560 ~~~~i~~si~~~~~~~v~epn~~~l~~~i~~~i~~~L~~l~~~gal~g~~V~~d~~~nt~~~i~~G~~~~~i~~~p~~pa 639 (664) T protein:vir:98 560 LFNMIKKDIGDNAKYKLFENNDDFTRASFRMDTGQYMTNIRALGGCYDYRVICDTTNNTPDVIDRNEFVATVYVKPPRSI 639 (664) T ss_pred HHHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCceeeeEEEEcCCCCCHHHhhCCeEEEEEEEEecCCc Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred eEEEEEEEEeecccchhhhhhhhhc Q lcl|Aclame:pro 638 NYITLNMVATSTGANFDELIGPMQL 662 (663) Q Consensus 638 e~i~~~~~~~~~~~~~~e~~~~~~~ 662 (663) |||+|||+|++++++|+|++++-.- T Consensus 640 e~I~~~~~q~~~~~~~~e~~~~~~~ 664 (664) T protein:vir:98 640 NYITLNFVATSTGADFDELVGPQAV 664 (664) T ss_pred ceEEEEEEEeecCcchhHhcccccC Confidence 9999999999999999999998777 No 7 >protein:vir:108052 Length: 660 # NCBI annotation: gp18 tail sheath protein # Family: family:all:661 # MgeID: mge:2002 # MgeName: JS98 # Cross-refs: genbank:acc:YP_001595294;genbank:gi:161622600;genbank:GeneID:5783771 Probab=100.00 E-value=8.2e-160 Score=892.74 Aligned_cols=658 Identities=66% Similarity=1.094 Sum_probs=512.4 Q ss_pred CceecCceEEEEecCCCcccccCCCceEEEeecccCCCCcceEeCCHHHHHHHcCCcCCCchhHHHHHHHHhcCCceEEE Q lcl|Aclame:pro 1 MALLSPGIEMKETSINSTVVRSATGRAAIVGKFAWGPAYEVRQVTNEVELVDMFGSPDNVTAPYFMSAMNFLQYGNDLRL 80 (663) Q Consensus 1 ~~~~~PGVyveEv~~~~~i~~v~Ts~~afvG~~~~Gpv~~p~~i~s~~e~~~~FG~~~~~~~~~~~~~~~F~nGG~~~~v 80 (663) |+|+||||||||++.+.+|++|+||++||||+|+|||+|+|++|+||.||++.||++++.+|++|++++||+|||++||| T Consensus 1 ~~~~~Pgvyv~e~~~~~~i~~~~t~~~~~vg~~~~gp~~~p~~v~s~~~~~~~fg~~~~~~~~~~~~~~~f~~~g~~~~v 80 (660) T protein:vir:10 1 MALLSPGIELKETSVQSTVVRNATGRAALVGKFQWGPAFQVTQITNEVELVDLFGGPNNEVADYFMSGMNFLQYGNDLRT 80 (660) T ss_pred CceecCceEEEeecCCccccCCCcccceEEeecCCCCCccCeEcCCHHHHHHHcCCcCCCchhHHHHHHHHHhCCceEEE Confidence 99999999999999777899999999999999999999999999999999999999999999999999999999999999 Q ss_pred EEeccccccccccccccceeeeeccccccccccccccccccccccccceeeeeeecccceeeeeecccchhccccccccc Q lcl|Aclame:pro 81 VRVIDMEKAKNASPLVNQVSVTITTEGQGYTVGDAITVKYNNATITEAGKVTAVDSDGKIKSLFVPTAEIIAKTRQLGTY 160 (663) Q Consensus 81 vRv~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~v~~~~~~g~~~~~~~~~~~~~~~~~~~~t~ 160 (663) ||+.+...++++....+.+..+...++....+++.+++............+.....++........+............. T Consensus 81 vrv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~v~~~~a~g~~~~~~~~ta~~~~~a~~v~~~ 160 (660) T protein:vir:10 81 VRVVSREFAKNASPIAGNIETTITTAGSNYAVGDKINIKYNQTVVESEGRVTSVDTDGKILSVFIPSAKIIAYARSLNQY 160 (660) T ss_pred EEecccccccccccccccceeEEeeccccccccceeeEeeccccccccccceeeccccceeeeccccccccccccccccc Confidence 99999887778877788888888888888888888887665544433333444444433222222211111122222222 Q ss_pred ccceeceeeeecccccceeeeeecccccccccccccccccccccccccccccccccccccceeeecchhhcccccccccc Q lcl|Aclame:pro 161 PTLGDNWRIDVSGASGGSAAALALGNIVVDSGVTFGNSEDAPAVMTSPAVMEKYAKFGMPLISAVYPGEIGSTVEVEIVS 240 (663) Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~g~~g~~v~v~~~~ 240 (663) +......................+.....+.............................+...+...+.+++.+.+.+.. T Consensus 161 ~~~~~~~~~~~~~~~~~~~~a~sv~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~g~~G~~i~v~i~~ 240 (660) T protein:vir:10 161 PTLGPAWTAEVTSASSGVSGTITVGKIVTDSGILLTEAENSEEAITSLEFQAALKKFAMPGVVALYPGEIGSTLEVEIVS 240 (660) T ss_pred cccccceeEEEecccCccccceeeeeeeccCcceEEeeeccccccccccceeeccccccceeeeecccccCcceeEEEee Confidence 22222111111111111111111111111111111111111111111111122223334455666777788877766543 Q ss_pred ccccccccccc--eecccceecccceeEEEecccccccceeeeccCCcceeeEeeeecccccccccchhhhhhhhcCCCc Q lcl|Aclame:pro 241 KTAFNSGAQQT--IYPFGGTRTSNARGVIQYGPMTDDQFAIIVRRDGIVVESTVLSTRKGDRDVYGSNIFMDDYFRNGGS 318 (663) Q Consensus 241 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s 318 (663) ........... ..................++..++.+.+++..++...+++.+....+.+..........+.+.++.+ T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (660) T protein:vir:10 241 KAAYEAGSSKMLDVYPGGGTRASIAKAVFNYGPQTDDQYAIIVRRDGAIVESVVLSTKEGEKDVYGNNIYLDDYFAKGTS 320 (660) T ss_pred ccccCCcceeEEeeeeccceeeEEeeeecccccccccccccccccCCcccceeeeeccccccccccceeeeehhhcCCCc Confidence 33222211111 1111111111222233344566777788888888888888887777766666666666677777778 Q ss_pred eEEEEeecccCCccceeEEecCcccccccccchhhhHHHHHhhhhccccceeEEeeccCcCChhHHHHHHHHHHHHHHhh Q lcl|Aclame:pro 319 NFIFASSEGWPAGFTGIIQLGGGTSANADVGADELIKGWDLFSDREALHVNLMIAGACGSDGAEIASTVQKYVVSLADDR 398 (663) Q Consensus 319 ~~v~~~~~~~~~~~~~~~~l~gg~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 398 (663) .++.......+.......++.++.++....+..++..+++.++..+...++++++|+..+.......+++++|++||+++ T Consensus 321 ~~v~~~~~~~~~~~~~~~~l~gg~~~~~~~t~~~~~~~~~~~~~~~~~~~~~l~~p~~~~~~~~~~~~v~~al~~~~~~~ 400 (660) T protein:vir:10 321 NYIYATSLNWPKGFSGIINLSGGISANDKVTAGDLMQGWDLFADREALHINLLIAGAVAGEGDEVASTVQKHVVSIADER 400 (660) T ss_pred cEEEEEeccCCCCcccceeeeccccCccccccchhhhhhhhhhhhhhcccceEEEcCcCCCchhhhHHHHHHHHHHHHhh Confidence 88887777777777778889999888777788888899999988888889999999988877778889999999999999 Q ss_pred CCeEEEecccccccccccccccHHHHHHHHhhcccccchhhhccCcCcceEEEecCceeecccccCceeEechHHHHHHH Q lcl|Aclame:pro 399 QDCVAIVNPPAELMVGIPTSTAVKNIVEWRNGMTGSGEVVDNNMNISSTYAFIIGNYKYQYDKYNDINRWVPLAADIAGL 478 (663) Q Consensus 399 ~~~~~i~d~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~p~~~~~d~~~~~~~~~p~s~~~AG~ 478 (663) ++||+|+|+|.+.........+.+++++||+..+.. ...+++++|+|+++||||++++|+.+++.+++|||+++||+ T Consensus 401 ~~~~aiid~p~~~~~~~~~~~~~~~~~~~r~~~~~~---~~~~~~~~s~~~~~~~p~~~~~d~~~~~~~~~p~sg~~AGl 477 (660) T protein:vir:10 401 QDCLAFISPPKGLLVNVPLTRAVDNLIDWRTGAGTF---DANNMNISTTYAAIDGNYKYQYDKYNDVNRWVPLAADLAGL 477 (660) T ss_pred CCEEEEEecCcccccccccccCHHHHHHHHhhcccc---cccccccCcceEEEEcCceEEecccCCceeEechhHHHHHH Confidence 999999999999888888889999999999875433 33467899999999999999999999999999999999999 Q ss_pred HHhhhhccCceecccceecceeecceeeeeecChhhhhhhhhCCceEEEEeeCCCcEEEEcceecCCCCccceeeehhhH Q lcl|Aclame:pro 479 CAYTDQVSHPWMSPAGYRRGQIRNCIKLAIEPKQSMRDTMYQVAINPVTGFAGGDGFVLFGDKMATQVPSPFDRINVRRL 558 (663) Q Consensus 479 ~a~~d~~~g~~~span~~~~~i~~~~~~~~~~~~~~~~~Ln~~~in~i~~~~~~~G~~~wG~rT~~~~~~~~~~i~vrR~ 558 (663) |||+|.++||||||+|+++++|+|++++++.+++.|++.||++||||||+|++.+||++||+||+++++++||||||||| T Consensus 478 ~Ar~D~~~g~~~sPan~~~~~i~g~~~~~~~~~~~e~~~Ln~~gIn~i~~~~~~~G~~~wG~rT~~~~~s~~~~i~vrR~ 557 (660) T protein:vir:10 478 CARTDDVSQPWMSPAGYNRGQILNVLKLAIEPRQAQRDRMYQEAINPVVGFAGGDGFVLFGDKTATKVPSPMDHINVRRL 557 (660) T ss_pred HHHhhccCCcEEccCCeeeceeeccceeeecCChhhHHhHhhCCceEEEEeeCCCcEEEEcccccCCCCcccceEehhhH Confidence 99999999999999999999999999999999999999999999999999998789999999999999899999999999 Q ss_pred HHHHHHHHHHHHHHhhcccCCHHHHHHHHHHHHHHHHHHHhcCceEEEEEEEccCCCCHHHhhCCEEEEEEEEEecCcce Q lcl|Aclame:pro 559 FNMLKKNIGDTSKYELFENNDAFTRQSFRMETSQYLDGIRSLGGCYDFRVVCDTTNNTPNVIDRNEFVGTIYVKPPRSIN 638 (663) Q Consensus 559 ~~~i~~~~~~~~~~~v~epn~~~~~~~v~~~i~~~L~~l~~~gal~g~~v~~d~~~nt~~~i~~G~~~~~i~~~p~~p~e 638 (663) |+||+++|+++++|+||||||+.||++|+.+|+.||++||++|+|.||+|+||+++||++||++|+|+|+|+++|++||| T Consensus 558 ~~~i~~si~~~~~~~v~epn~~~l~~~i~~~i~~fL~~l~~~gal~g~~V~~d~~~nt~~di~~G~~~~~i~~~P~~pae 637 (660) T protein:vir:10 558 FNMLKKNIGDASKYKLFELNDNFTRSSFRMEVSQYLDGIKALGGIYEGRVVCDTTVNTPAVIDRNEFIANIYVKPARSIN 637 (660) T ss_pred HHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeEEEEcCCCCCHHHhhCCeEEEEEEEEecCCcc Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred EEEEEEEEeecccchhhhhhhhh Q lcl|Aclame:pro 639 YITLNMVATSTGANFDELIGPMQ 661 (663) Q Consensus 639 ~i~~~~~~~~~~~~~~e~~~~~~ 661 (663) ||+|||+|++++++|+|+++++- T Consensus 638 ~I~~~~~~~~~~~~~~e~~~~~~ 660 (660) T protein:vir:10 638 YITLNFVATSTGADFDELIGPLV 660 (660) T ss_pred EEEEEEEEeecCccHHHHhhhcC Confidence 99999999999999999999999 No 8 >protein:vir:103456 Length: 659 # NCBI annotation: tail sheath monomer # Family: family:all:661 # MgeID: mge:1542 # MgeName: RB32 # Cross-refs: genbank:acc:YP_803108;genbank:gi:116326388;genbank:GeneID:4405485 Probab=100.00 E-value=3e-158 Score=884.15 Aligned_cols=657 Identities=61% Similarity=1.049 Sum_probs=513.6 Q ss_pred CceecCceEEEEecCCCcccccCCCceEEEeecccCCCCcceEeCCHHHHHHHcCCcCCCchhHHHHHHHHhcCCceEEE Q lcl|Aclame:pro 1 MALLSPGIEMKETSINSTVVRSATGRAAIVGKFAWGPAYEVRQVTNEVELVDMFGSPDNVTAPYFMSAMNFLQYGNDLRL 80 (663) Q Consensus 1 ~~~~~PGVyveEv~~~~~i~~v~Ts~~afvG~~~~Gpv~~p~~i~s~~e~~~~FG~~~~~~~~~~~~~~~F~nGG~~~~v 80 (663) |+|+||||||||+|+++++.+++||++||||+|+|||+|+|++|+||.||+|.||++++.+|++|++++||+|||++||| T Consensus 1 ~~~~~PgVyv~e~~~~~~~~~~~ts~~~fvG~~~~Gp~~~p~~i~s~~d~~~~fG~~~~~~~~~~~v~~~f~ngg~~~~v 80 (659) T protein:vir:10 1 MTLLSPGIELKETTVQSTVVNNSTGTAALAGKFQWGPAFQIKQVTNEVDLVNTFGQPTAETADYFMSAMNFLQYGNDLRV 80 (659) T ss_pred CceecCceEEEEecCCceecccCccceEEEecccCCCCCccEEecCHHHHHHHcCCcCCCcchhHHHHHHHhhCCCeEEE Confidence 99999999999999998877789999999999999999999999999999999999999999999999999999999999 Q ss_pred EEeccccccccccccccceeeeeccccccccccccccccccccccccceeeeeeecccceeeeeecccchhccccccccc Q lcl|Aclame:pro 81 VRVIDMEKAKNASPLVNQVSVTITTEGQGYTVGDAITVKYNNATITEAGKVTAVDSDGKIKSLFVPTAEIIAKTRQLGTY 160 (663) Q Consensus 81 vRv~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~v~~~~~~g~~~~~~~~~~~~~~~~~~~~t~ 160 (663) ||+++.++++++....+.+..+...++.....++...+....+.......+...+.++...................+.. T Consensus 81 vRv~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~v~~vd~~~~~~~~~i~~~~~~~~~~~~g~~ 160 (659) T protein:vir:10 81 VRAVDRDTAKNSSPIAGNIEYTISTPGSNYAVGDKITVKYVSDAIETEGKITEVDTDGKIKKINIPTAKIIAKAKEVGEY 160 (659) T ss_pred EEccCcccccccccccccceeeEeecccccccccceeeeecCCCccccceeeEEecccccceeeeccccccccccccccc Confidence 99999888888777777777777767666666666665554444444444444444444333333322222222222222 Q ss_pred ccceeceeeeecccccceeeeeecccccccccccccccccccccccccccccccccccccceeeecchhhcccccccccc Q lcl|Aclame:pro 161 PTLGDNWRIDVSGASGGSAAALALGNIVVDSGVTFGNSEDAPAVMTSPAVMEKYAKFGMPLISAVYPGEIGSTVEVEIVS 240 (663) Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~g~~g~~v~v~~~~ 240 (663) +............................+...............+.............+...+..++.+++.+++.+.. T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~a~t~~~~~~~~~~~~~~~v~a~~~G~~g~~~tv~~~~ 240 (659) T protein:vir:10 161 PTLGSNWTAEISSSSSGLAAVITLGKIITDSGILLAEIENAEAAMTAVDFQANLKKYGIPGVVALYPGELGDKIEIEIVS 240 (659) T ss_pred ceeeeeeeeeeeeeccccceeeEEeeeecCCceeEEeeccccccccccccccceeecccccccccccceecccceEEEec Confidence 22222111111111111111111111111111111111111111111222222223344455666777888877776654 Q ss_pred ccccccccccce--ecccceecccceeEEEecccccccceeeeccCCcceeeEeeeecccccccccchhhhhhhhcCCCc Q lcl|Aclame:pro 241 KTAFNSGAQQTI--YPFGGTRTSNARGVIQYGPMTDDQFAIIVRRDGIVVESTVLSTRKGDRDVYGSNIFMDDYFRNGGS 318 (663) Q Consensus 241 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s 318 (663) ............ ..................+..++.+.+.+...+...+.+.+....+.+.......+..+.+.++++ T Consensus 241 ~a~~~~~~~v~v~~~~~~~~~a~~~t~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (659) T protein:vir:10 241 KADYAKGASALLPIYPGGGTRASTAKAVFGYGPQTDSQYAIIVRRNDAIVQSVVLSTKRGEKDIYDSNIYIDDFFAKGGS 320 (659) T ss_pred hhhccccceeeeeeeeecccccccceeeeeeccccccchhhccccccceeeeeeeeccccccccccchhhhhhhhccCcc Confidence 443332222221 222222333344445555666667777777778777887777777776666777777788888888 Q ss_pred eEEEEeecccCCccceeEEecCcccccccccchhhhHHHHHhhhhccccceeEEeeccCcCChhHHHHHHHHHHHHHHhh Q lcl|Aclame:pro 319 NFIFASSEGWPAGFTGIIQLGGGTSANADVGADELIKGWDLFSDREALHVNLMIAGACGSDGAEIASTVQKYVVSLADDR 398 (663) Q Consensus 319 ~~v~~~~~~~~~~~~~~~~l~gg~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 398 (663) .++.+.....+....+..++.+|.++....+..+++.+++.+...+.++++++++|+..+...+...+++.+|++||+++ T Consensus 321 ~~v~~~~~~~~~~~~~~~~l~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~p~~~~~~~~~~~~v~~al~~~~~~~ 400 (659) T protein:vir:10 321 EYIFATAQNWPEGFSGILTLSGGLSSNAEVTAGDLMEAWDFFADRESVDVQLFIAGSCAGESLETASTVQKHVVSIGDAR 400 (659) T ss_pred cEEEEeecccCCCccceeeecccccccccccchhHHHHHHHhhhccccceeEEEecCCCCcchhhhHHHHHHHHHHHHhh Confidence 88888888777777788899999888777788889999999999998999999999988887778888999999999999 Q ss_pred CCeEEEecccccccccccccccHHHHHHHHhhcccccchhhhccCcCcceEEEecCceeecccccCceeEechHHHHHHH Q lcl|Aclame:pro 399 QDCVAIVNPPAELMVGIPTSTAVKNIVEWRNGMTGSGEVVDNNMNISSTYAFIIGNYKYQYDKYNDINRWVPLAADIAGL 478 (663) Q Consensus 399 ~~~~~i~d~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~p~~~~~d~~~~~~~~~p~s~~~AG~ 478 (663) ++||+++|+|...........+.+++++||+..+.. .....+++|+|+++||||++++|+.+++.+++|||+++||+ T Consensus 401 ~~~~~~~d~p~~~~~~~~~~~~~~~~~~~r~~~~~~---~~~~~~~~s~~~~l~~p~~~~~d~~~~~~~~~p~sg~~AGl 477 (659) T protein:vir:10 401 QDCLVLCSPPRETVVGIPVTRAVDNLVNWRTAAGSY---TDNNFNISSTYAAIDGNYKYQYDKYNDVNRWVPLAADIAGL 477 (659) T ss_pred CCeEEEEcCccccccCCCcccCHHHHHHHHHhcccc---cccccccCcceEEEEeCcEEEecccCCceEEechHHHHHHH Confidence 999999999999888888889999999999875433 33456799999999999999999999999999999999999 Q ss_pred HHhhhhccCceecccceecceeecceeeeeecChhhhhhhhhCCceEEEEeeCCCcEEEEcceecCCCCccceeeehhhH Q lcl|Aclame:pro 479 CAYTDQVSHPWMSPAGYRRGQIRNCIKLAIEPKQSMRDTMYQVAINPVTGFAGGDGFVLFGDKMATQVPSPFDRINVRRL 558 (663) Q Consensus 479 ~a~~d~~~g~~~span~~~~~i~~~~~~~~~~~~~~~~~Ln~~~in~i~~~~~~~G~~~wG~rT~~~~~~~~~~i~vrR~ 558 (663) |||+|.+|||||||+|+++++|.|++++++.++++|++.||++|||||++|++ +|+++||+||+++++++|+||||||| T Consensus 478 ~Ar~D~~~g~~~span~~~~~i~g~~~~~~~~~~~~~~~Ln~~gIn~i~~~~~-~G~~~wG~rT~~~~~s~~~~i~vrR~ 556 (659) T protein:vir:10 478 CARTDNVSQTWMSPAGYNRGQILNVIKLAIETRQAQRDRLYQEAINPVTGTGG-DGYVLYGDKTATSVPSPFDRINVRRL 556 (659) T ss_pred HHHHhccCCceEccCCceeeeeeccccceecCCHhHHHHHhhCCeeEEEEeCC-CeEEEEcccccCCCCcccceEehhhH Confidence 99999999999999999999999999999999999999999999999999997 79999999999989889999999999 Q ss_pred HHHHHHHHHHHHHHhhcccCCHHHHHHHHHHHHHHHHHHHhcCceEEEEEEEccCCCCHHHhhCCEEEEEEEEEecCcce Q lcl|Aclame:pro 559 FNMLKKNIGDTSKYELFENNDAFTRQSFRMETSQYLDGIRSLGGCYDFRVVCDTTNNTPNVIDRNEFVGTIYVKPPRSIN 638 (663) Q Consensus 559 ~~~i~~~~~~~~~~~v~epn~~~~~~~v~~~i~~~L~~l~~~gal~g~~v~~d~~~nt~~~i~~G~~~~~i~~~p~~p~e 638 (663) |+||+++|+++++|+|||||++.||++|+.+|+.||++||++|+|+||+|+||+++||+++|++|+|+|+|+++|++|+| T Consensus 557 ~~~i~~si~~~~~~~v~e~n~~~l~~~i~~~i~~fL~~l~~~gal~~~~V~~d~~~nt~~~i~~G~~~~~i~~~p~~pae 636 (659) T protein:vir:10 557 FNMLKTNIGRSSKYRLFELNNAFTRSSFRTETAQYLQGIKALGGIYEYRVVCDTTNNTPSVIDRNEFVATFYIQPARSIN 636 (659) T ss_pred HHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhcCceeeEEEEEcCCCCCHHHhhCCeEEEEEEEEecCCcc Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred EEEEEEEEeecccchhhhhhhhh Q lcl|Aclame:pro 639 YITLNMVATSTGANFDELIGPMQ 661 (663) Q Consensus 639 ~i~~~~~~~~~~~~~~e~~~~~~ 661 (663) ||+|||+|++++++|+|+++.-- T Consensus 637 ~i~~~~~~~~~~~~~~e~~~~~~ 659 (659) T protein:vir:10 637 YITLNFVATATGADFDELTGLAG 659 (659) T ss_pred eEEEEEEEEecCcchHHhhccCC Confidence 99999999999999999998766 No 9 >protein:vir:6594 Length: 666 # NCBI annotation: tail sheath protein # Family: family:all:661 # MgeID: mge:139 # MgeName: RB49 # Cross-refs: genbank:acc:NP_891725;genbank:gi:33620670;genbank:GeneID:1725344 Probab=100.00 E-value=2.5e-158 Score=884.66 Aligned_cols=658 Identities=60% Similarity=1.020 Sum_probs=494.8 Q ss_pred CceecCceEEEEecCCCcccccCCCceEEEeecccCCCCcceEeCCHHHHHHHcCCcCCCchhHHHHHHHHhcCCceEEE Q lcl|Aclame:pro 1 MALLSPGIEMKETSINSTVVRSATGRAAIVGKFAWGPAYEVRQVTNEVELVDMFGSPDNVTAPYFMSAMNFLQYGNDLRL 80 (663) Q Consensus 1 ~~~~~PGVyveEv~~~~~i~~v~Ts~~afvG~~~~Gpv~~p~~i~s~~e~~~~FG~~~~~~~~~~~~~~~F~nGG~~~~v 80 (663) |+|+||||||||++++++|++|+||++||||+|+|||+|+|++|+||.||+|+||++.+.+|++|++++||+|||++||| T Consensus 1 ~~~~~PgVyv~e~~~~~~i~~v~ts~~~fvG~~~~Gp~~~p~~v~s~~~~~~~fG~~~~~~~~~~~~~~~f~ngg~~~~v 80 (666) T protein:vir:65 1 MTLLSPGFETKETTLSTTIVQSETGRAALVGKFQWGPAFQIIQVTNEVELVNKFGQPDNNTADYFMSGANFLQYGNDLRV 80 (666) T ss_pred CceecCceEEEEecCcccccccCcccceEEecccCCCCccCEEecCHHHHHHHcCCccccchhHHHHHHHHHhcCceEEE Confidence 99999999999998777899999999999999999999999999999999999999999999999999999999999999 Q ss_pred EEeccccccccccccccceeeeeccccccccccccccccccccccccceeeeeeecccceeeeeecccchhccccccccc Q lcl|Aclame:pro 81 VRVIDMEKAKNASPLVNQVSVTITTEGQGYTVGDAITVKYNNATITEAGKVTAVDSDGKIKSLFVPTAEIIAKTRQLGTY 160 (663) Q Consensus 81 vRv~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~v~~~~~~g~~~~~~~~~~~~~~~~~~~~t~ 160 (663) ||+++.+..+++....+....+...++....+++.+.+...................+........+..........+.. T Consensus 81 vrv~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~V~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~~~~~~~~g~~ 160 (666) T protein:vir:65 81 VRVLNKEKAKNATALAGNVEFEITNEGSNYEVGDTIKIKHNRQDIETAGKVTKVDGDGKVKGVFIPTGKIIAHAKAIGVY 160 (666) T ss_pred EEccCcccccccccccCceeeeEeeccccccccceEEEEecccccccccccccccccccccccccccceeeccccccCcc Confidence 99998888877777777777777777766667777666544332222222222222221111111121111111221111 Q ss_pred ccceeceeeeecccccceeeeeecccccccccccccccccccccccccccccccccccccceeeecchhhcccccccccc Q lcl|Aclame:pro 161 PTLGDNWRIDVSGASGGSAAALALGNIVVDSGVTFGNSEDAPAVMTSPAVMEKYAKFGMPLISAVYPGEIGSTVEVEIVS 240 (663) Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~g~~g~~v~v~~~~ 240 (663) ..+....................+.....+.............................+...+..++.+++.+++.+.. T Consensus 161 ~~l~~~~~~~~~~~~~~~~~a~sv~~~~~~g~~~~~~~~~a~~~~~~~~~~~~~~~~~~~a~~A~~~g~~g~~i~v~i~~ 240 (666) T protein:vir:65 161 PELDGGWTAEFTSSSGNGSAALSVTKIVTDSGLLLTDLETSRANITNQTFLTKLKKYDMPAVSAIYAGEIGNSLEVEILA 240 (666) T ss_pred eeEeeccceeecccCcccccceeeeecccccceeeeeecccccccccccccccccccccceeeeeeccccccceeEEeec Confidence 11111111111111111111111111111111111111111111111111122222334455667778888777766544 Q ss_pred ccccccccccceecccceecccceeEEEecccccccceeeeccCCcceeeEeeeecccccccccchhhhhhhhcCCCceE Q lcl|Aclame:pro 241 KTAFNSGAQQTIYPFGGTRTSNARGVIQYGPMTDDQFAIIVRRDGIVVESTVLSTRKGDRDVYGSNIFMDDYFRNGGSNF 320 (663) Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ 320 (663) ..........................+......+..+.+++...+...|.+.++...+.+.......++.+.+.++.+.+ T Consensus 241 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (666) T protein:vir:65 241 RSAFKNTAPDLTMYPYGGERTAARNLIPYAPQNDNQYAFIVRRDGVVVESYVLSTLKGDKDVYGNSIYMDDFFARGSSQY 320 (666) T ss_pred ccccccccccccccccccccccceeeecccccccccceeeeecCCcccceeecccCcccccccchhhhhhhhhcccccce Confidence 32222111111111111111223334445556667788888888998999988888888887777777788887888888 Q ss_pred EEEeecccCCccceeEEecCcccccccc--------cchhhhHHHHHhhhhccccceeEEeeccCcCChhHHHHHHHHHH Q lcl|Aclame:pro 321 IFASSEGWPAGFTGIIQLGGGTSANADV--------GADELIKGWDLFSDREALHVNLMIAGACGSDGAEIASTVQKYVV 392 (663) Q Consensus 321 v~~~~~~~~~~~~~~~~l~gg~d~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 392 (663) +.......+........+.++.+..... ...+...+++.++..+...++++++|+.... .++..+++.+|+ T Consensus 321 v~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~p~~~~~-~~~~~~v~~~l~ 399 (666) T protein:vir:65 321 IYATAQGWVDGFSGIISLAGGVSANEATTGGVGADPFIGAMMQGWDLFAERESIHVNLLIAGACAGE-GDAFSTVQKHAV 399 (666) T ss_pred eeeecccccccccceEEccCCCCcCcccccccccccccccHHHHHHHHhhhhhccCCceeecCcCCc-cchhHHHHHHHH Confidence 7777666555555666777776643321 2234556777888777778888888877654 345678999999 Q ss_pred HHHHhhCCeEEEecccccccccccccccHHHHHHHHhhcccccchhhhccCcCcceEEEecCceeecccccCceeEechH Q lcl|Aclame:pro 393 SLADDRQDCVAIVNPPAELMVGIPTSTAVKNIVEWRNGMTGSGEVVDNNMNISSTYAFIIGNYKYQYDKYNDINRWVPLA 472 (663) Q Consensus 393 ~~~~~~~~~~~i~d~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~p~~~~~d~~~~~~~~~p~s 472 (663) +||+++++||+++|+|...........+.+++++||+.+... .....+++|+|+++||||++++|+.+++.+++||| T Consensus 400 ~~~~~~~~~~a~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~s~~~~~~~p~~~~~d~~~~~~~~~p~s 476 (666) T protein:vir:65 400 SIGDERQDCLVMVSPPRSTVVNIPVTTAIDNLIAWREGSGNY---NENNMNINTTYAVIDGNYKYQYDKYNDVNRWVPLA 476 (666) T ss_pred HHHhhccceEEEeccccceeeecCCCCCHHHHHHHHHhcccc---cccccccCcceEEEEcCceEEecccCCceeEechH Confidence 999999999999999998888888889999999999986543 23456789999999999999999999999999999 Q ss_pred HHHHHHHHhhhhccCceecccceecceeecceeeeeecChhhhhhhhhCCceEEEEeeCCCcEEEEcceecCCCCcccee Q lcl|Aclame:pro 473 ADIAGLCAYTDQVSHPWMSPAGYRRGQIRNCIKLAIEPKQSMRDTMYQVAINPVTGFAGGDGFVLFGDKMATQVPSPFDR 552 (663) Q Consensus 473 ~~~AG~~a~~d~~~g~~~span~~~~~i~~~~~~~~~~~~~~~~~Ln~~~in~i~~~~~~~G~~~wG~rT~~~~~~~~~~ 552 (663) +++||+|||+|.++||||||+|+++++|.|++++++.+++.|++.||++|||||++|++ +|+++||+||+++++++|+| T Consensus 477 g~vAGl~Ar~D~~~g~~~span~~~~~i~g~~~~~~~~~~~~~~~Ln~~gIn~i~~~~~-~G~~~wG~rT~~~~~s~~~~ 555 (666) T protein:vir:65 477 ADIAGLCARTDAVSQPWMSPAGYNRGQIMNVVKLAIEPRKAHRDRLYQAAINPVIGAGG-EGFILMGDKTATTVPSPFDR 555 (666) T ss_pred HHHHHHHHHHhccCCcEEccCCeecceeeccccceeecChhHHHhhhhCCceEEEEeCC-CeEEEEecccCCCCCcccce Confidence 99999999999999999999999999999999999999999999999999999999986 79999999999998889999 Q ss_pred eehhhHHHHHHHHHHHHHHHhhcccCCHHHHHHHHHHHHHHHHHHHhcCceEEEEEEEccCCCCHHHhhCCEEEEEEEEE Q lcl|Aclame:pro 553 INVRRLFNMLKKNIGDTSKYELFENNDAFTRQSFRMETSQYLDGIRSLGGCYDFRVVCDTTNNTPNVIDRNEFVGTIYVK 632 (663) Q Consensus 553 i~vrR~~~~i~~~~~~~~~~~v~epn~~~~~~~v~~~i~~~L~~l~~~gal~g~~v~~d~~~nt~~~i~~G~~~~~i~~~ 632 (663) ||+||||+||+++|+++++|+||||||+.||++|+++|+.||++||++|+|.||+|+||+++||++||++|+|+++|+++ T Consensus 556 i~vrR~~~~i~~si~~~~~~~v~epn~~~l~~~i~~~i~~~L~~l~~~gal~g~~V~~d~~~nt~~~i~~G~~~~~i~~~ 635 (666) T protein:vir:65 556 INVRRLFNMLKKNIGDSSKYKLFENNDNFTRASFRMEVSQYLSTIRSLGGIYDFRVQCDTTNNTPDVIDRNEFVASMFIK 635 (666) T ss_pred EehhhHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeEEEEcCCCCCHHHhhCCeEEEEEEEE Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred ecCcceEEEEEEEEeecccchhhhhhhhhcC Q lcl|Aclame:pro 633 PPRSINYITLNMVATSTGANFDELIGPMQLA 663 (663) Q Consensus 633 p~~p~e~i~~~~~~~~~~~~~~e~~~~~~~~ 663 (663) |++|||||+|||+|++++++|+|+++++||| T Consensus 636 p~~pae~i~~~~~~~~~~~~~~e~~~~~~~~ 666 (666) T protein:vir:65 636 PAKSINYIMLNFTAVATGSDFDEIIGPANQA 666 (666) T ss_pred ecCCcceEEEEEEEeecCccHHHHHHHHhcC Confidence 9999999999999999999999999999999 No 10 >protein:vir:80984 Length: 666 # NCBI annotation: gp18 tail sheath protein # Family: family:all:661 # MgeID: mge:1888 # MgeName: Phi1 # Cross-refs: genbank:acc:YP_001469499;genbank:gi:157311456;genbank:GeneID:5602117 Probab=100.00 E-value=9.4e-158 Score=881.45 Aligned_cols=657 Identities=60% Similarity=1.051 Sum_probs=495.9 Q ss_pred CceecCceEEEEecCCCcccccCCCceEEEeecccCCCCcceEeCCHHHHHHHcCCcCCCchhHHHHHHHHhcCCceEEE Q lcl|Aclame:pro 1 MALLSPGIEMKETSINSTVVRSATGRAAIVGKFAWGPAYEVRQVTNEVELVDMFGSPDNVTAPYFMSAMNFLQYGNDLRL 80 (663) Q Consensus 1 ~~~~~PGVyveEv~~~~~i~~v~Ts~~afvG~~~~Gpv~~p~~i~s~~e~~~~FG~~~~~~~~~~~~~~~F~nGG~~~~v 80 (663) |+|++|||||||++++++|++|+||++||||+|+|||+|+|++|+||.||+|.||++.+.+|++|++++||+|||++||| T Consensus 1 ~~~~~Pgvyv~e~~~~~~~~~~~t~~~~~vg~~~~gp~~~p~~i~~~~~~~~~fg~~~~~~~~~~~~~~~f~~~g~~~~v 80 (666) T protein:vir:80 1 MTLLSPGFETKETTLSTTIVQSATGRAALVGKFQWGPAFQIIQVTNEVELVNKFGQPDNNTADYFMSGANFLQYGNDLRV 80 (666) T ss_pred CceecCceEEEEecCCccccccCcccceEEeccccCCCccceEecCHHHHHHhcCCccCccchHHHHHHHHhcCCCeEEE Confidence 99999999999998777899999999999999999999999999999999999999999999999999999999999999 Q ss_pred EEeccccccccccccccceeeeeccccccccccccccccccccccccceeeeeeecccceeeeeecccchhccccccccc Q lcl|Aclame:pro 81 VRVIDMEKAKNASPLVNQVSVTITTEGQGYTVGDAITVKYNNATITEAGKVTAVDSDGKIKSLFVPTAEIIAKTRQLGTY 160 (663) Q Consensus 81 vRv~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~v~~~~~~g~~~~~~~~~~~~~~~~~~~~t~ 160 (663) ||+++.++++++....+.+..+...++....+++.+.+...................+........+............. T Consensus 81 ~R~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~ta~~~~~a~~~~~~ 160 (666) T protein:vir:80 81 VRVLNKEKAKNATALAGNIEFEITNEGSNYEVGDTIKIKHNRQDIETAGKVTKVDGDGKVKGVFIPTGKIIAHAKAIGVY 160 (666) T ss_pred EEecCccccccccccccceeEEEeeccccccccccccccccCcccccCcceEEEeecceeeeeecchhhhcccccccccc Confidence 99999888888888888888888888877777777666554443332222222223333332222222222222222222 Q ss_pred ccceeceeeeecccccceeeeeecccccccccccccccccccccccccccccccccccccceeeecchhhcccccccccc Q lcl|Aclame:pro 161 PTLGDNWRIDVSGASGGSAAALALGNIVVDSGVTFGNSEDAPAVMTSPAVMEKYAKFGMPLISAVYPGEIGSTVEVEIVS 240 (663) Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~g~~g~~v~v~~~~ 240 (663) +.+....................+.....+...............+.............+...+..++.+++.+++.+.. T Consensus 161 ~~v~~~~~~~~~~~~~~~~~a~~V~~~~~~~~~~~~~~~~a~~~~t~~~~~~~~~~~~~~a~~a~~~g~~g~~l~v~i~~ 240 (666) T protein:vir:80 161 PELDGDWTAEFTSSSGNGSAALSVTKIVTDSGLLLTDLETSRANITNQTFLTKLQKYDMPAVSAIYAGEIGNSLEVEILA 240 (666) T ss_pred ceeeccceeeeccccccceeeeeeeeeecCCccceeeeccccccccccccccccccccchhhhhhcccccccceeeeecc Confidence 22222222222222222222222222222211111111111111222222222233344555666777888777766543 Q ss_pred cccccc-ccccceecccceecccceeEEEecccccccceeeeccCCcceeeEeeeecccccccccchhhhhhhhcCCCce Q lcl|Aclame:pro 241 KTAFNS-GAQQTIYPFGGTRTSNARGVIQYGPMTDDQFAIIVRRDGIVVESTVLSTRKGDRDVYGSNIFMDDYFRNGGSN 319 (663) Q Consensus 241 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~ 319 (663) ...... ....+..... .............+..+..+.+++...+...|++.++...+.+.......++.+.+.++.+. T Consensus 241 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (666) T protein:vir:80 241 RSAFKNTAPDLTMYPYG-GERTAARNLIPYAPQNDNQYAFIVRRDGVVVESYVLSTLKGDKDVYGNSIYMDDFFGRGSSQ 319 (666) T ss_pred ccccccccccceeeecc-ccccccceeeeeccccccceeeEeccCCccceeeecccccccccccchhhhhhhhhccccce Confidence 322211 1111111111 11112233444555666778888888888899998888888877777777788888787777 Q ss_pred EEEEeecccCCccceeEEecCcccccccc----cchh----hhHHHHHhhhhccccceeEEeeccCcCChhHHHHHHHHH Q lcl|Aclame:pro 320 FIFASSEGWPAGFTGIIQLGGGTSANADV----GADE----LIKGWDLFSDREALHVNLMIAGACGSDGAEIASTVQKYV 391 (663) Q Consensus 320 ~v~~~~~~~~~~~~~~~~l~gg~d~~~~~----~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 391 (663) ++................+.++.+..... +..+ .......+...+.+.++++++|+.... .....+++++| T Consensus 320 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~p~~~~~-~~~~~~v~~~~ 398 (666) T protein:vir:80 320 YIYATAQGWVDGFSGIISLAGGVSANEATTGGVGADPFIGAMMQGWGLFAERESIHVNLLIAGACAGE-GDAFSTVQKHA 398 (666) T ss_pred eeeecccccccccceEEEecCCCCcccccccccccccccccchhhhhhhhhhcccccceEeecCcCCc-ccchHHHHHHH Confidence 77777766666666666777776543221 1111 122233334444456677777766553 34567789999 Q ss_pred HHHHHhhCCeEEEecccccccccccccccHHHHHHHHhhcccccchhhhccCcCcceEEEecCceeecccccCceeEech Q lcl|Aclame:pro 392 VSLADDRQDCVAIVNPPAELMVGIPTSTAVKNIVEWRNGMTGSGEVVDNNMNISSTYAFIIGNYKYQYDKYNDINRWVPL 471 (663) Q Consensus 392 ~~~~~~~~~~~~i~d~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~p~~~~~d~~~~~~~~~p~ 471 (663) ++||+++++||+++|+|..........++++++++|++..+.. .....+++|+|+++||||++++|+.+++.+++|| T Consensus 399 ~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~~~~~~~~~---~~~~~~~~s~~~~l~~p~~~~~d~~~~~~~~~p~ 475 (666) T protein:vir:80 399 VSIGDERQDCLVMVSPPRSTVVNIPVTTAIDNLIAWREGSGNY---NENNMNINTTYAVIDGNYKYQYDKYNDVNRWVPL 475 (666) T ss_pred HHHHHhhcceEEEeecceeEEeecCCCCCHHHHHHHHHhcccc---hhhhcccCcceEEEEcCceEEecccCCceeEech Confidence 9999999999999999998888888888999999999875433 3345679999999999999999999999999999 Q ss_pred HHHHHHHHHhhhhccCceecccceecceeecceeeeeecChhhhhhhhhCCceEEEEeeCCCcEEEEcceecCCCCccce Q lcl|Aclame:pro 472 AADIAGLCAYTDQVSHPWMSPAGYRRGQIRNCIKLAIEPKQSMRDTMYQVAINPVTGFAGGDGFVLFGDKMATQVPSPFD 551 (663) Q Consensus 472 s~~~AG~~a~~d~~~g~~~span~~~~~i~~~~~~~~~~~~~~~~~Ln~~~in~i~~~~~~~G~~~wG~rT~~~~~~~~~ 551 (663) ||++||+|||+|.++||||||+|+++++|+|++++++.+++.|++.||++|||||++|++ +|+++||+||+++++++|| T Consensus 476 sg~~AGl~Ar~D~~~g~~~sPan~~~~~i~g~~~~~~~~~~~~~~~Ln~~gIn~i~~~~g-~G~~~wG~rT~~~~~s~~~ 554 (666) T protein:vir:80 476 AADIAGLCARTDAVSQPWMSPAGYNRGQIMNVVKLAIEPRKAHRDRLYQAAINPVIGAGG-EGFILMGDKTATTVPSPFD 554 (666) T ss_pred HHHHHHHHHHHhhcCCceEccCCeecceeeccccceeecChhHHHhhhhCCeeEEEEeCC-CeEEEEccccCCCCCcccc Confidence 999999999999999999999999999999999999999999999999999999999997 7999999999999988999 Q ss_pred eeehhhHHHHHHHHHHHHHHHhhcccCCHHHHHHHHHHHHHHHHHHHhcCceEEEEEEEccCCCCHHHhhCCEEEEEEEE Q lcl|Aclame:pro 552 RINVRRLFNMLKKNIGDTSKYELFENNDAFTRQSFRMETSQYLDGIRSLGGCYDFRVVCDTTNNTPNVIDRNEFVGTIYV 631 (663) Q Consensus 552 ~i~vrR~~~~i~~~~~~~~~~~v~epn~~~~~~~v~~~i~~~L~~l~~~gal~g~~v~~d~~~nt~~~i~~G~~~~~i~~ 631 (663) ||||||||+||+++|++.++|+||||||+.||.+|+++|++||++||++|+|.||+|+||+++||++||++|+|+++|++ T Consensus 555 ~i~vRRl~~~i~~si~~~~~~~v~epn~~~l~~~i~~~i~~~L~~l~~~gal~g~~V~~d~~~nt~~di~~G~~~~~i~~ 634 (666) T protein:vir:80 555 RINVRRLFNMLKKNIGDSSKYKLFENNDNFTRASFRMEVSQYLSTIRSLGGIYDFRVQCDTTNNTPDVIDRNEFVASMFI 634 (666) T ss_pred eeehhhHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhcCceeeeEEEEcCCCCCHHHhhCCeEEEEEEE Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred EecCcceEEEEEEEEeecccchhhhhhhhhcC Q lcl|Aclame:pro 632 KPPRSINYITLNMVATSTGANFDELIGPMQLA 663 (663) Q Consensus 632 ~p~~p~e~i~~~~~~~~~~~~~~e~~~~~~~~ 663 (663) +|++|||||+|||+|++++++|+|++++|||| T Consensus 635 ~P~~Pae~I~~~~~~~~~~~~~~e~~~~~~~~ 666 (666) T protein:vir:80 635 KPAKSINYIMLNFTAVATGSDFDEIIGPVNQA 666 (666) T ss_pred EecCCcceEEEEEEEeecCccHHHHHHHHhcC Confidence 99999999999999999999999999999999 No 11 >protein:vir:7206 Length: 659 # NCBI annotation: gp18 tail sheath protein # Family: family:all:661 # MgeID: mge:142 # MgeName: T4 # Cross-refs: genbank:acc:NP_049780;genbank:gi:9632592;genbank:GeneID:1258597 Probab=100.00 E-value=2.7e-157 Score=878.93 Aligned_cols=657 Identities=60% Similarity=1.033 Sum_probs=503.9 Q ss_pred CceecCceEEEEecCCCcccccCCCceEEEeecccCCCCcceEeCCHHHHHHHcCCcCCCchhHHHHHHHHhcCCceEEE Q lcl|Aclame:pro 1 MALLSPGIEMKETSINSTVVRSATGRAAIVGKFAWGPAYEVRQVTNEVELVDMFGSPDNVTAPYFMSAMNFLQYGNDLRL 80 (663) Q Consensus 1 ~~~~~PGVyveEv~~~~~i~~v~Ts~~afvG~~~~Gpv~~p~~i~s~~e~~~~FG~~~~~~~~~~~~~~~F~nGG~~~~v 80 (663) |+|+||||||||+|+++++.+++|||+||||+|+|||+|+|++|+||.||+++||++++.+|++|++++||+|||++||| T Consensus 1 ~~~~~PgVyvee~~~~~~~~~~~ts~~~fvG~~~~Gp~~~p~~i~s~~~~~~~fG~~~~~~~~~~~~~~~f~ngg~~~~v 80 (659) T protein:vir:72 1 MTLLSPGIELKETTVQSTVVNNSTGTAALAGKFQWGPAFQIKQVTNEVDLVNTFGQPTAETADYFMSAMNFLQYGNDLRV 80 (659) T ss_pred CceecCceEEEEecCCcccccCCCcceEEEeecCCCCCcccEEecCHHHHHHHcCCcCCCCchhHHHHHHHHhCCceEEE Confidence 99999999999999998888889999999999999999999999999999999999999999999999999999999999 Q ss_pred EEeccccccccccccccceeeeeccccccccccccccccccccccccceeeeeeecccceeeeeecccchhccccccccc Q lcl|Aclame:pro 81 VRVIDMEKAKNASPLVNQVSVTITTEGQGYTVGDAITVKYNNATITEAGKVTAVDSDGKIKSLFVPTAEIIAKTRQLGTY 160 (663) Q Consensus 81 vRv~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~v~~~~~~g~~~~~~~~~~~~~~~~~~~~t~ 160 (663) |||++...++++......+..+...++.....................+.+.....++...................+.. T Consensus 81 vRv~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~v~~~~~~~~~~~~~v~t~~~~a~~~~~~~~ 160 (659) T protein:vir:72 81 VRAVDRDTAKNSSPIAGNIDYTISTPGSNYAVGDKITVKYVSDDIETEGKITEVDADGKIKKINIPTGKNYAKAKEVGEY 160 (659) T ss_pred EEccCCcccccccccccccceeecccccccccceeeeeeeccccccccceEEEeeccccceeeeeccccccccccccccc Confidence 99998877777666666665555555554444444433333222222233333333333332222222222211222211 Q ss_pred ccceeceeeeecccccceeeeeecccccccccccccccccccccccccccccccccccccceeeecchhhcccccccccc Q lcl|Aclame:pro 161 PTLGDNWRIDVSGASGGSAAALALGNIVVDSGVTFGNSEDAPAVMTSPAVMEKYAKFGMPLISAVYPGEIGSTVEVEIVS 240 (663) Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~g~~g~~v~v~~~~ 240 (663) +............................+.............................+...+..++.+++.+++.+.. T Consensus 161 ~~~~~~~~~~~~~~~~~~a~~~~~v~v~~~~~~~~~~v~~~~~a~~~~~~~~~v~~~~~~~~~a~~~gt~g~~~tv~i~~ 240 (659) T protein:vir:72 161 PTLGSNWTAEISSSSSGLAAVITLGKIITDSGILLAEIENAEAAMTAVDFQANLKKYGIPGVVALYPGELGDKIEIEIVS 240 (659) T ss_pred cccccceeeEEeeccccccceEEEEEeecCcceeeeeccccchhhhcccccccccccccceeeeccccccccceeEEEcc Confidence 11111111111100110001111111111111000000111111111111112222233444555667777777666554 Q ss_pred ccccccccccce--ecccceecccceeEEEecccccccceeeeccCCcceeeEeeeecccccccccchhhhhhhhcCCCc Q lcl|Aclame:pro 241 KTAFNSGAQQTI--YPFGGTRTSNARGVIQYGPMTDDQFAIIVRRDGIVVESTVLSTRKGDRDVYGSNIFMDDYFRNGGS 318 (663) Q Consensus 241 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s 318 (663) ............ .............+....+..++.+.+.+...+...+.+.+....+.........+....+.++++ T Consensus 241 ~~~~~~~~~~~v~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (659) T protein:vir:72 241 KADYAKGASALLPIYPGGGTRASTAKAVFGYGPQTDSQYAIIVRRNDAIVQSVVLSTKRGEKDIYDSNIYIDDFFAKGGS 320 (659) T ss_pred ccccccceeeeeecccccccccccceeeeeeecccccccceeeecccceeeeeeeeeccccccccchhhhhhhhhhcCCc Confidence 433322222211 122223334444555666777777778877778788888777777777777777777888888888 Q ss_pred eEEEEeecccCCccceeEEecCcccccccccchhhhHHHHHhhhhccccceeEEeeccCcCChhHHHHHHHHHHHHHHhh Q lcl|Aclame:pro 319 NFIFASSEGWPAGFTGIIQLGGGTSANADVGADELIKGWDLFSDREALHVNLMIAGACGSDGAEIASTVQKYVVSLADDR 398 (663) Q Consensus 319 ~~v~~~~~~~~~~~~~~~~l~gg~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 398 (663) .++.+.....+....+..++.+|.++....+..++..+++.+...+.++++++++|+..+...+...+++.+|++||+++ T Consensus 321 ~~v~~~~~~~~~~~~~~~~l~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~p~~~~~~~~~~~~v~~~l~~~~~~~ 400 (659) T protein:vir:72 321 EYIFATAQNWPEGFSGILTLSGGLSSNAEVTAGDLMEAWDFFADRESVDVQLFIAGSCAGESLETASTVQKHVVSIGDAR 400 (659) T ss_pred eEEEEEecccCCcccccccccccccccccccchhHHHHHHHhhhccccceeEEEecCCCCcchhhhHHHHHHHHHHHhhh Confidence 88888888888877888889999888777788889999999999998999999999988887778888999999999999 Q ss_pred CCeEEEecccccccccccccccHHHHHHHHhhcccccchhhhccCcCcceEEEecCceeecccccCceeEechHHHHHHH Q lcl|Aclame:pro 399 QDCVAIVNPPAELMVGIPTSTAVKNIVEWRNGMTGSGEVVDNNMNISSTYAFIIGNYKYQYDKYNDINRWVPLAADIAGL 478 (663) Q Consensus 399 ~~~~~i~d~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~p~~~~~d~~~~~~~~~p~s~~~AG~ 478 (663) ++||+++|+|...........+.+++++||+..+.. .....+++|+|+++||||++++|+.+++.+++||||++||+ T Consensus 401 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~~r~~~~~~---~~~~~~~~s~~~~~~~p~~~~~d~~~~~~~~~p~sg~vAGl 477 (659) T protein:vir:72 401 QDCLVLCSPPRETVVGIPVTRAVDNLVNWRTAAGSY---TDNNFNISSTYAAIDGNHKYQYDKYNDVNRWVPLAADIAGL 477 (659) T ss_pred CCEEEEEcCccccccCCCcccCHHHHHHHHhhcccc---ccccccccceeEEEEcCceeeccccCCceEEechHHHHHHH Confidence 999999999998888888888999999999976543 34556899999999999999999999999999999999999 Q ss_pred HHhhhhccCceecccceecceeecceeeeeecChhhhhhhhhCCceEEEEeeCCCcEEEEcceecCCCCccceeeehhhH Q lcl|Aclame:pro 479 CAYTDQVSHPWMSPAGYRRGQIRNCIKLAIEPKQSMRDTMYQVAINPVTGFAGGDGFVLFGDKMATQVPSPFDRINVRRL 558 (663) Q Consensus 479 ~a~~d~~~g~~~span~~~~~i~~~~~~~~~~~~~~~~~Ln~~~in~i~~~~~~~G~~~wG~rT~~~~~~~~~~i~vrR~ 558 (663) |||+|.++||||||+|+++++|.|++++++.+++.|++.||++|||||++|++ +|+++||+||+++++++|+||||||+ T Consensus 478 ~Ar~D~~~G~~~span~~~~~i~g~~~~~~~~~~~~~~~Ln~~gIn~i~~~~g-~G~~~wG~rT~~~~~s~~~~i~vrR~ 556 (659) T protein:vir:72 478 CARTDNVSQTWMSPAGYNRGQILNVIKLAIETRQAQRDRLYQEAINPVTGTGG-DGYVLYGDKTATSVPSPFDRINVRRL 556 (659) T ss_pred HHHhhccCCcEEccCCeeeceeeccccccccCChhHHHHHhhCCceEEEEecC-CeEEEEcccccCCCCcccceEeehhH Confidence 99999999999999999999999999999999999999999999999999997 79999999999999889999999999 Q ss_pred HHHHHHHHHHHHHHhhcccCCHHHHHHHHHHHHHHHHHHHhcCceEEEEEEEccCCCCHHHhhCCEEEEEEEEEecCcce Q lcl|Aclame:pro 559 FNMLKKNIGDTSKYELFENNDAFTRQSFRMETSQYLDGIRSLGGCYDFRVVCDTTNNTPNVIDRNEFVGTIYVKPPRSIN 638 (663) Q Consensus 559 ~~~i~~~~~~~~~~~v~epn~~~~~~~v~~~i~~~L~~l~~~gal~g~~v~~d~~~nt~~~i~~G~~~~~i~~~p~~p~e 638 (663) |+||+++|+++++|+|||||++.||.+|+.+|++||++||++|+|+||+|+||+++||++||++|+|+++|+|+|++|+| T Consensus 557 ~~~i~~si~~~~~~~v~e~n~~~l~~~i~~~i~~fL~~l~~~gal~~~~V~~d~~~nt~~~i~~G~~~~~i~~~p~~pae 636 (659) T protein:vir:72 557 FNMLKTNIGRSSKYRLFELNNAFTRSSFRTETAQYLQGNKALGGIYEYRVVCDTTNNTPSVIDRNEFVATFYIQPARSIN 636 (659) T ss_pred HHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCceeeEEEEEcCCCCCHHHhhCCeEEEEEEEEecCCcc Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred EEEEEEEEeecccchhhhhhhhh Q lcl|Aclame:pro 639 YITLNMVATSTGANFDELIGPMQ 661 (663) Q Consensus 639 ~i~~~~~~~~~~~~~~e~~~~~~ 661 (663) ||+|||+|++++++|+|++++.- T Consensus 637 ~I~~~~~~~~~~~~~~e~~~~~~ 659 (659) T protein:vir:72 637 YITLNFVATATGADFDELTGLAG 659 (659) T ss_pred EEEEEEEEeecCcchHHhcccCC Confidence 99999999999999999999877 No 12 >protein:vir:5663 Length: 671 # NCBI annotation: tail sheath protein # Family: family:all:661 # MgeID: mge:119 # MgeName: KVP40 # Cross-refs: genbank:acc:NP_899602;genbank:gi:34419589;genbank:GeneID:2545776 Probab=100.00 E-value=8.5e-148 Score=826.87 Aligned_cols=650 Identities=52% Similarity=0.878 Sum_probs=463.8 Q ss_pred CceecCceEEEEecCCCcccccCCCceEEEeecccCCCCcceEeCCHHHHHHHcCCcCCCchhHHHHHHHHhcCCceEEE Q lcl|Aclame:pro 1 MALLSPGIEMKETSINSTVVRSATGRAAIVGKFAWGPAYEVRQVTNEVELVDMFGSPDNVTAPYFMSAMNFLQYGNDLRL 80 (663) Q Consensus 1 ~~~~~PGVyveEv~~~~~i~~v~Ts~~afvG~~~~Gpv~~p~~i~s~~e~~~~FG~~~~~~~~~~~~~~~F~nGG~~~~v 80 (663) |+|+||||||||++.+++|++|+||++||||+|+|||+|+|++|+||.||+++||++++.+|++|++++||+|||++||| T Consensus 1 ~~~~~Pgvyv~e~~~~~~i~~v~t~~~~fvG~~~~Gp~~~p~~v~s~~~~~~~fG~~~~~~~~~~~v~~~f~ngg~~~~v 80 (671) T protein:vir:56 1 MTLLSPGIENKEINLASAIGRAATGRAAMVGKFEWGPAYSITQVTSESDLVTIFGRPNDYTAASFMTANNFLKYGNDLRL 80 (671) T ss_pred CceecCceEEEeecCcccccccCcccceEEecccCCCCccCEEcCCHHHHHHHcCCcCCCcchhHHHHHHHHhcCCeEEE Confidence 99999999999998767799999999999999999999999999999999999999999999999999999999999999 Q ss_pred EEeccccccccccccccceeeeeccccccccccccccccccccc-cccceeeeeee--cccceeeeeecccchhcccccc Q lcl|Aclame:pro 81 VRVIDMEKAKNASPLVNQVSVTITTEGQGYTVGDAITVKYNNAT-ITEAGKVTAVD--SDGKIKSLFVPTAEIIAKTRQL 157 (663) Q Consensus 81 vRv~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~-~~~~~~v~~~~--~~g~~~~~~~~~~~~~~~~~~~ 157 (663) ||+++++..+++....+....+... +.+..+++.+.+...... .....++.... ..+................... T Consensus 81 vrv~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~v~~~~~~ 159 (671) T protein:vir:56 81 VRICDATTAQNATPLYNAVEYTIGA-SNGCVVGDDITITYSGVGALTAKGKVLEVDAGNNNAASKIFLPSAEIVAAAKSD 159 (671) T ss_pred EEecCccccccchhhcccccccccc-CcceeeceeeeeecCcccccccCcceeEEeeeccceeeeeeccceeEEEeeecc Confidence 9999887776665554444333322 223334444444332211 11112211111 1111111111111111111111 Q ss_pred cccccceeceeeeecccccceee-eeeccc--ccccc--cccccccccccccccccccccccccccccceeeecchhhcc Q lcl|Aclame:pro 158 GTYPTLGDNWRIDVSGASGGSAA-ALALGN--IVVDS--GVTFGNSEDAPAVMTSPAVMEKYAKFGMPLISAVYPGEIGS 232 (663) Q Consensus 158 ~t~~~~~~~~~~~~~~~~~~~~~-~~~~~~--~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~g~~g~ 232 (663) ...+...... .......... ...... ..... ............................+.+.+...+.+++ T Consensus 160 ~~~~~~~~~t---~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~g~~g~ 236 (671) T protein:vir:56 160 GNYPSVGTIT---LQPTQGDIALTNIEIIDTGSVYFPNIELAFDALTAIETEGGALKYADLIEKQGFPRLSARYVGDFGD 236 (671) T ss_pred cccccccccc---ccccccceeeeeecccccceEEEeccccccccccccccccccccchhhhhcccccccccccccccCc Confidence 1111110000 0000000000 000000 00000 00000000000000111111222223334455556666666 Q ss_pred cccccccccccccccc-----------ccceecccceecccceeEEEecccccccceeeeccCCcceeeEeeeecccccc Q lcl|Aclame:pro 233 TVEVEIVSKTAFNSGA-----------QQTIYPFGGTRTSNARGVIQYGPMTDDQFAIIVRRDGIVVESTVLSTRKGDRD 301 (663) Q Consensus 233 ~v~v~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 301 (663) .+.+.+.......... .....................+...++.+..++..++...+++.++...+... T Consensus 237 ~~~v~v~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~~~ 316 (671) T protein:vir:56 237 AISVEIINYADYQTAFAFAAGHTLGDIELPIYPDGGTRSINLSSYFTFGPSNSNQYAVIVRVSGEVEEAFIVSTNPGDKD 316 (671) T ss_pred ceEEEEecccccccccccccceeeeeccccccccccccccccceeecccccccccceeEEeecCccceeEEEeecccccc Confidence 6655443221111110 01111111122222233334445555666777777788888888877777766 Q ss_pred cccchhhhhhhhcCCCceEEEEeecccCCccceeEEecCcccccccccchhhhHHHHHhhhhccccceeEEeeccCcCCh Q lcl|Aclame:pro 302 VYGSNIFMDDYFRNGGSNFIFASSEGWPAGFTGIIQLGGGTSANADVGADELIKGWDLFSDREALHVNLMIAGACGSDGA 381 (663) Q Consensus 302 ~~~~~~~~~~~~~~~~s~~v~~~~~~~~~~~~~~~~l~gg~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 381 (663) .............++++.++.......+ .......+.|+.+.. .+..+++.+++.+++.+.+.+.++++++..+.+. T Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~gg~d~~--~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~ 393 (671) T protein:vir:56 317 VNGQSIFIDEYFENSGSAYITAIAEGWK-TESGAYNFGGGSDAN--AGADDWMFGLDMLSDPEVLYTNLVIAGNAAAEEV 393 (671) T ss_pred cchhhhhhhhhhcccCceEEEecCcccC-CccccccccCccccc--cchhHHHHHHHhhhhccccceeEEEcCCCCCccc Confidence 6666666666666666655554444333 333445677776653 5677888999999998888999999988877766 Q ss_pred hHHHHHHHHHHH-HHHhhCCeEEEecccccccccccccccHHHHHHHHhhcccc-cchhhhccCcCcceEEEecCceeec Q lcl|Aclame:pro 382 EIASTVQKYVVS-LADDRQDCVAIVNPPAELMVGIPTSTAVKNIVEWRNGMTGS-GEVVDNNMNISSTYAFIIGNYKYQY 459 (663) Q Consensus 382 ~~~~~~~~~~~~-~~~~~~~~~~i~d~p~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~s~~~~~~~p~~~~~ 459 (663) .....++++++. +|+.+++|++++|+|...........+++++.+|++..... ........+++|+|+++||||++++ T Consensus 394 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~p~~~~~ 473 (671) T protein:vir:56 394 SIASTVQKYAIDSVGNVRQDCVVFVSPPQSLIVNKQAGTAVANIQGWRTGIDPTNGQAVVDNLNVSTTYAVIDGNYKYQY 473 (671) T ss_pred hhHHHHHHHHHHHHHhhcCCEEEEEeccccccccccccccHHHHHHHhhhccccchhhhhhhccCCcceEEEecCceEEe Confidence 666666666555 45568899999999998888888889999999999876543 3345567789999999999999999 Q ss_pred ccccCceeEechHHHHHHHHHhhhhccCceecccceecceeecceeeeeecChhhhhhhhhCCceEEEEeeCCCcEEEEc Q lcl|Aclame:pro 460 DKYNDINRWVPLAADIAGLCAYTDQVSHPWMSPAGYRRGQIRNCIKLAIEPKQSMRDTMYQVAINPVTGFAGGDGFVLFG 539 (663) Q Consensus 460 d~~~~~~~~~p~s~~~AG~~a~~d~~~g~~~span~~~~~i~~~~~~~~~~~~~~~~~Ln~~~in~i~~~~~~~G~~~wG 539 (663) |+.+++.+++|||+++||+|||+|.++||||||+|+++++|.|+.++++.+++.|++.||++|||||++|++ +|+++|| T Consensus 474 d~~~~~~~~~p~s~~~AGl~Ar~D~~~g~~~span~~~~~i~g~~~~~~~~~~~~~~~Ln~~gIn~i~~~~~-~G~~~wG 552 (671) T protein:vir:56 474 DKYNDRNRWVPLAGDIAGLCAYTDQVSQPWMSPAGFNRGQIKGVNRLAVDLRRAHRDALYQIGINPVVGFAG-QGFVLYG 552 (671) T ss_pred cccCCceeEechHHHHHHHHHHhhccCCcEECcCCceeccccccccceeecChhHHHHHhhCCceEEEEecC-CeEEEEc Confidence 999999999999999999999999999999999999999999999999999999999999999999999997 7999999 Q ss_pred ceecCCCCccceeeehhhHHHHHHHHHHHHHHHhhcccCCHHHHHHHHHHHHHHHHHHHhcCceEEEEEEEccCCCCHHH Q lcl|Aclame:pro 540 DKMATQVPSPFDRINVRRLFNMLKKNIGDTSKYELFENNDAFTRQSFRMETSQYLDGIRSLGGCYDFRVVCDTTNNTPNV 619 (663) Q Consensus 540 ~rT~~~~~~~~~~i~vrR~~~~i~~~~~~~~~~~v~epn~~~~~~~v~~~i~~~L~~l~~~gal~g~~v~~d~~~nt~~~ 619 (663) +||+++++++|+|||+||||+||+++|+++++|+|||||++.||++|+++|++||++||++|+|.||+|+||+++||++| T Consensus 553 ~rT~~~~~~~~~~i~vrR~~~~i~~si~~~~~~~v~epn~~~~~~~i~~~i~~fL~~l~~~gal~g~~v~~d~~~nt~~~ 632 (671) T protein:vir:56 553 DKTATQQASAFDRINVRRLFNLLKKAISDAAKYRLFELNDEFTRSSFKSEIDAYLTNIQDLGGVYDFRVVCDETNNPGSV 632 (671) T ss_pred ceecCCCCcccceEehhhHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeEEEEcCCCCCHHH Confidence 99999888899999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred hhCCEEEEEEEEEecCcceEEEEEEEEeecccchhhhhh Q lcl|Aclame:pro 620 IDRNEFVGTIYVKPPRSINYITLNMVATSTGANFDELIG 658 (663) Q Consensus 620 i~~G~~~~~i~~~p~~p~e~i~~~~~~~~~~~~~~e~~~ 658 (663) |++|+|+++|+++|++|+|||+|||+|++.+++|+|+++ T Consensus 633 i~~G~~~~~i~~~p~~Pae~I~~~~~~~~~~~~f~e~~~ 671 (671) T protein:vir:56 633 IDRNEFVASIYVKPAKSINFITLNFVATSTDADFAEIIG 671 (671) T ss_pred hhCCeEEEEEEEEecCCcceEEEEEEEeecCcchhhhcC Confidence 999999999999999999999999999999999999999 No 13 >protein:vir:104477 Length: 749 # NCBI annotation: gp18 # Family: family:all:661 # MgeID: mge:1548 # MgeName: P-SSM4 # Cross-refs: genbank:acc:YP_214663;genbank:gi:61806304;genbank:GeneID:3294532 Probab=100.00 E-value=9.6e-140 Score=782.74 Aligned_cols=637 Identities=30% Similarity=0.474 Sum_probs=410.3 Q ss_pred Cc--eecCceEEEEecCCCcccccCCCceEEEeecccCCCCcceEeCCHHHHHHHcCCcCCCchhHHHHHHHHhcCCceE Q lcl|Aclame:pro 1 MA--LLSPGIEMKETSINSTVVRSATGRAAIVGKFAWGPAYEVRQVTNEVELVDMFGSPDNVTAPYFMSAMNFLQYGNDL 78 (663) Q Consensus 1 ~~--~~~PGVyveEv~~~~~i~~v~Ts~~afvG~~~~Gpv~~p~~i~s~~e~~~~FG~~~~~~~~~~~~~~~F~nGG~~~ 78 (663) |+ |+||||||||+|++++|.+++||++||||+|+|||+|+|++|+||.||+++||++++.+|++|++++||+|||++| T Consensus 1 M~~~~~~PgVyv~e~~~~~~~~~~~t~~~~fvG~~~~Gp~~~p~~v~s~~~~~~~fG~~~~~~~~~~~v~~~F~ngg~~~ 80 (749) T protein:vir:10 1 MATNQSSPGVVIQERDLTTVSTIPTANVGVIAAPFTKGPVEEVIEITSERQLAEKFGEPNESNYEYWFSAAQFLSYGGLL 80 (749) T ss_pred CCccccCCeeEEEEecCCcccccccCceeEEEeccCCCCCccCEEcCCHHHHHHHcCCccCCcccHHHHHHHHhhcCCeE Confidence 88 8999999999999888999999999999999999999999999999999999999999999999999999999999 Q ss_pred EEEEeccccccccccccccce-------------------eeeeccccccccccccccccccccccccceeeeeeecccc Q lcl|Aclame:pro 79 RLVRVIDMEKAKNASPLVNQV-------------------SVTITTEGQGYTVGDAITVKYNNATITEAGKVTAVDSDGK 139 (663) Q Consensus 79 ~vvRv~~~~~~~~a~~~~~~~-------------------~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~v~~~~~~g~ 139 (663) ||||+.+... +++....+.. .+.+..+| .+++.+.+................. ... T Consensus 81 ~vvRv~~~~~-~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~pG---~~gn~l~v~v~~~~~~~~~~~~~~~-~~~ 155 (749) T protein:vir:10 81 KTIRVNSSSL-KNAVDTGTAPLVKNLQDYETSIEDASNNFSWVARTPG---DTGNSIGIFVTDAGADQVVVVPAPG-SGN 155 (749) T ss_pred EEEEccCccc-cccccccccccccccccccccccccccceEEEeccCC---CcCCceEEEEEcCCCceeeeeecCC-ccc Confidence 9999976542 2222211111 11122222 2333333222111110000000000 000 Q ss_pred eeeeeecc------cch--hcccccccccccceeceee----eecccccc--eeee-eecc----ccccccccccccccc Q lcl|Aclame:pro 140 IKSLFVPT------AEI--IAKTRQLGTYPTLGDNWRI----DVSGASGG--SAAA-LALG----NIVVDSGVTFGNSED 200 (663) Q Consensus 140 ~~~~~~~~------~~~--~~~~~~~~t~~~~~~~~~~----~~~~~~~~--~~~~-~~~~----~~~~~~~~~~~~~~~ 200 (663) ........ ... ........+.......... ........ .... .... .+...+....+. .. T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~a~~~~~~~~~~~~~~~~~~s~~~~~~-~a 234 (749) T protein:vir:10 156 EHEFVADAAVSAASGAAGKVFKYSIILTIDDVVGTFAPGSATTITIGGSAESVNVLAYDATNKKLEIGLPSGGVTGI-LA 234 (749) T ss_pred eeeEEeeecccccccccccccccceeeeeccccceeecccceeeeccCcccccccccccCCcceEEEeeecccccce-ee Confidence 00000000 000 0000000000000000000 00000000 0000 0000 000000000000 00 Q ss_pred cccccccc----------cccc--c-cccccccceeeecchhhccccccccccccccccccc-cceecccceecccceeE Q lcl|Aclame:pro 201 APAVMTSP----------AVME--K-YAKFGMPLISAVYPGEIGSTVEVEIVSKTAFNSGAQ-QTIYPFGGTRTSNARGV 266 (663) Q Consensus 201 ~~~~~~~~----------~~~~--~-~~~~~~~~~~a~~~g~~g~~v~v~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 266 (663) .....+.. .... . .................+..+.+..+.......... ...+....+.+...... T Consensus 235 ~~~~v~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~~~~~~~~~g~~~~it~v~~~~~~~~~~t~~~~~~~a~~~gt~~~~ 314 (749) T protein:vir:10 235 DNQVITQGTNTAKINVTIERKLLVALNKSSIEFAASDVVQDTNSTNITITSVRDEYTEREYLPGVKWINVAPRPGTSLYA 314 (749) T ss_pred eeecccccccccccccccccchhhhhccccceeeccccccCCccceeEEEeeeccccccccccceeeccccccccceeee Confidence 00000000 0000 0 000000001111112222222222222111111111 11233344455555555 Q ss_pred EEecccccccceeeeccCC-------cceeeEe-eeecccccccccchhhhhhhhcCCCceEEEEeecccC--------- Q lcl|Aclame:pro 267 IQYGPMTDDQFAIIVRRDG-------IVVESTV-LSTRKGDRDVYGSNIFMDDYFRNGGSNFIFASSEGWP--------- 329 (663) Q Consensus 267 ~~~~~~~~~~~~~~~~~~g-------~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~s~~v~~~~~~~~--------- 329 (663) ...++..+..+..+...++ .+.|.+. ++...+.+...+...++.+.++.. +.++.......+ T Consensus 315 ~~~~g~~D~~~v~v~~~~g~~~~~~g~v~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~-s~~v~~~~~~~~~~~~~~~~~ 393 (749) T protein:vir:10 315 NGVGGHRDEMHVILVDIDGGVTGTVGALLERYIDVSKASDAKTSVGETNYYAEVIKQK-SEFIYWAEHESTLYAATSSAS 393 (749) T ss_pred ecccCCCCceEEEEecCCCeeeecccceeeeeeeccccccccccccccchhhhhhccC-CCEEEEEeccccccccccccc Confidence 5555566655555554443 3444443 344445555555555555555432 333322111000 Q ss_pred -----------------------------------CccceeEEecCcccccc-----cccchhhhHHHHHhhhhccccce Q lcl|Aclame:pro 330 -----------------------------------AGFTGIIQLGGGTSANA-----DVGADELIKGWDLFSDREALHVN 369 (663) Q Consensus 330 -----------------------------------~~~~~~~~l~gg~d~~~-----~~~~~~~~~~~~~~~~~~~~~~~ 369 (663) ........+.++.|... .....++..+++.+...+...++ T Consensus 394 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gg~d~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 473 (749) T protein:vir:10 394 DGLFGQTAANRQFNLFRSAAGSVDYPAGVTTLGSKNNATYYYRLSGGVNYTVSAGQYTITNTDIGSAYELIGDPESQIVD 473 (749) T ss_pred ccccccccccceeeccccccccceeccccccccccCCcEEEEEccCCcccccccccccccchhHHHHHHHhhhhhhcccc Confidence 00011234455554332 23345667788888877777788 Q ss_pred eEEeeccCcCChhHHHHHHHHHHHHHHhhCCeEEEeccccccccccccc-ccHHHHHHHHhhcccccchhhhccCcCcce Q lcl|Aclame:pro 370 LMIAGACGSDGAEIASTVQKYVVSLADDRQDCVAIVNPPAELMVGIPTS-TAVKNIVEWRNGMTGSGEVVDNNMNISSTY 448 (663) Q Consensus 370 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~d~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ 448 (663) ++++++....+ .+..+++++|++||+++++||+++|+|.+........ ....++..|+.. +++|+| T Consensus 474 ~li~~~~~~~~-~~~~~v~~al~~~~~~~~~~~~~~d~p~~~~~~~~~~~~~~~~~~~~~~~------------~~~s~~ 540 (749) T protein:vir:10 474 FIISGPSGTSD-ANALAKITSLVNIAEERRDCMVFVSPRRGNVIGISNTTTITTNIVDFFKK------------LPSSSY 540 (749) T ss_pred eEEEecCCCCc-chhHHHHHHHHHHHhhcCCEEEEEcCCCCcccccccchhhhhHHHHHHhh------------ccCcee Confidence 88877765543 4456789999999999999999999998765543332 344566666654 367899 Q ss_pred EEEecCceeecccccCceeEechHHHHHHHHHhhhhccCceecccceecceeecceeeeeecChhhhhhhhhCCceEEEE Q lcl|Aclame:pro 449 AFIIGNYKYQYDKYNDINRWVPLAADIAGLCAYTDQVSHPWMSPAGYRRGQIRNCIKLAIEPKQSMRDTMYQVAINPVTG 528 (663) Q Consensus 449 ~~~~~p~~~~~d~~~~~~~~~p~s~~~AG~~a~~d~~~g~~~span~~~~~i~~~~~~~~~~~~~~~~~Ln~~~in~i~~ 528 (663) +++||||++++|+.+++.+++|||+++||+|||+|.++||||||+|+++.+|+|++++++.+++.|++.||++|||||++ T Consensus 541 ~~~~~p~~~~~d~~~~~~~~~p~s~~vAGl~Ar~D~~~g~~~SPan~~~~~i~g~~~~~~~~~~~e~~~Ln~~gIn~i~~ 620 (749) T protein:vir:10 541 MVFDSGYKYIYDKYNDVYRYIPCNGDTAGLCLQTNEISEPWFSPAGFQRGVLRNAIKLAYTPNKAQRDQLYANRVNPIVS 620 (749) T ss_pred EEEEccceeeeccccCceEEechHHHHHHHHHHhhccCCcEECcCCceeeeeeccccceeecChhHHHhhhhCCceEEEE Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred eeCCCcEEEEcceecCCCCccceeeehhhHHHHHHHHHHHHHHHhhcccCCHHHHHHHHHHHHHHHHHHHhcCceEEEEE Q lcl|Aclame:pro 529 FAGGDGFVLFGDKMATQVPSPFDRINVRRLFNMLKKNIGDTSKYELFENNDAFTRQSFRMETSQYLDGIRSLGGCYDFRV 608 (663) Q Consensus 529 ~~~~~G~~~wG~rT~~~~~~~~~~i~vrR~~~~i~~~~~~~~~~~v~epn~~~~~~~v~~~i~~~L~~l~~~gal~g~~v 608 (663) |++ +|+++||+||+++.+++|+||||||||+|||++|+++++|+||||||+.||++|+++|++||++||++|+|.||+| T Consensus 621 ~~g-~G~~~wG~rT~~s~d~~~~~i~vRRl~~~ie~si~~~~~~~v~epn~~~l~~~i~~~i~~fL~~l~~~G~i~~f~V 699 (749) T protein:vir:10 621 FPG-QGVVLYGDKTALGFASAFDRINIRRLFLTVERVISTAAKAQLFEQNDEAQRSLFINIVEPYLRDVQGRRGVVDFLV 699 (749) T ss_pred ecC-CeEEEEcceecCCCCcccceeehhhhHHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCeeeeEE Confidence 997 7999999999976667999999999999999999999999999999999999999999999999999999999999 Q ss_pred EEccCCCCHHHhhCCEEEEEEEEEecCcceEEEEEEEEeecccchhhhhh Q lcl|Aclame:pro 609 VCDTTNNTPNVIDRNEFVGTIYVKPPRSINYITLNMVATSTGANFDELIG 658 (663) Q Consensus 609 ~~d~~~nt~~~i~~G~~~~~i~~~p~~p~e~i~~~~~~~~~~~~~~e~~~ 658 (663) +||+++||+++|++|+|+++|+++|++|||||+|||+|++++.+|+|+.. T Consensus 700 ~~d~~~Nt~~~i~~G~~~~~i~~~P~~pae~I~~~~~~~~~~~~~~e~~s 749 (749) T protein:vir:10 700 KCDSTNNTPEAVDRGEFYAEVFLKPTRTINYVQLTFVATRTGVSFAEVAS 749 (749) T ss_pred EEcCCCCCHHHhhCCEEEEEEEEEecCCccEEEEEEEEeecCcchHHHhC Confidence 99999999999999999999999999999999999999999999999999 No 14 >protein:vir:106984 Length: 743 # NCBI annotation: contractile sheath protein gp18 # Family: family:all:661 # MgeID: mge:1459 # MgeName: S-PM2 # Cross-refs: genbank:acc:YP_195136;genbank:gi:58532913;uniprot:Q5GQN6;genbank:GeneID:3260481 Probab=100.00 E-value=1.3e-138 Score=776.54 Aligned_cols=638 Identities=30% Similarity=0.458 Sum_probs=396.1 Q ss_pred Cc-eecCceEEEEecCCC-cccccCCCceEEEeecccCCCCcceEeCCHHHHHHHcCCcCCCchhHHHHHHHHhcCCceE Q lcl|Aclame:pro 1 MA-LLSPGIEMKETSINS-TVVRSATGRAAIVGKFAWGPAYEVRQVTNEVELVDMFGSPDNVTAPYFMSAMNFLQYGNDL 78 (663) Q Consensus 1 ~~-~~~PGVyveEv~~~~-~i~~v~Ts~~afvG~~~~Gpv~~p~~i~s~~e~~~~FG~~~~~~~~~~~~~~~F~nGG~~~ 78 (663) |. ||+|||||||+|+++ +|++|+||++||||+|+|||+|+|++|+||.||++.||++++.+|++|++++||+|||++| T Consensus 1 m~~~~~Pgvyv~e~~~~~~~i~~~~t~~~~~vg~~~~Gp~~~p~~i~s~~~~~~~fG~~~~~~~~~~~v~~~f~ngg~~~ 80 (743) T protein:vir:10 1 MASQVSPGILIKERDLTNAVVTGALQIRAAHASTFAKGPIGDIVNINTQKELVSVFGEPKEDNAEDWMVASEFLNYGGRL 80 (743) T ss_pred CccccCCceEEEEecCCCceeccCCcceeEEEEeccCCCCCcCEEecCHHHHHHHcCCccCCcchHHHHHHHHHhCCceE Confidence 98 999999999999876 5999999999999999999999999999999999999999999999999999999999999 Q ss_pred EEEEecccccccccccccc----------------ceeeeeccccccccccccccccccccccccceeeeeeecccc--e Q lcl|Aclame:pro 79 RLVRVIDMEKAKNASPLVN----------------QVSVTITTEGQGYTVGDAITVKYNNATITEAGKVTAVDSDGK--I 140 (663) Q Consensus 79 ~vvRv~~~~~~~~a~~~~~----------------~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~v~~~~~~g~--~ 140 (663) ||||+.++... ++..... .+.+.+..+| .+++.+.+....+................ . T Consensus 81 ~vvrv~~~~~~-~a~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~G---~~gN~i~V~v~~~~~d~~~~~~~~~~~~~~~~ 156 (743) T protein:vir:10 81 AVVRAETTGVL-NATTGSAGVLVKNRESWDAGSGNGEVFVARTAG---SWGNSLMGVLVDRGADYIVTFAATPTDTAVGT 156 (743) T ss_pred EEEEccCcccc-ccccccccccccccccccccccceeEEEEeecc---ccccceEEEEecCCCcceeeeeccccccccce Confidence 99999876432 2222111 1222222222 23333332221111111000000000000 0 Q ss_pred eeeeecccchhcc-cccccccccc------eeceeeeeccccc--c-----------------eeeeeec-ccc------ Q lcl|Aclame:pro 141 KSLFVPTAEIIAK-TRQLGTYPTL------GDNWRIDVSGASG--G-----------------SAAALAL-GNI------ 187 (663) Q Consensus 141 ~~~~~~~~~~~~~-~~~~~t~~~~------~~~~~~~~~~~~~--~-----------------~~~~~~~-~~~------ 187 (663) ............. .......... ............. . ....... ... T Consensus 157 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (743) T protein:vir:10 157 QLLFSYSGTLVTGEILSYDSATNTATITASGTLTSQYLLDTPEQGLIGSFTDNSTTEVGRTPGTYSNVPASGGTGTGATF 236 (743) T ss_pred eeeecccccccccceeeeeecCcceeeeeccccceeeecccccccccccccccccccccccccceeeEEecccccccccc Confidence 0000000000000 0000000000 0000000000000 0 0000000 000 Q ss_pred ---ccccccccccccccccccccccccc--ccc----ccc--ccceeeecchhhccccccccccccccccc--cccceec Q lcl|Aclame:pro 188 ---VVDSGVTFGNSEDAPAVMTSPAVME--KYA----KFG--MPLISAVYPGEIGSTVEVEIVSKTAFNSG--AQQTIYP 254 (663) Q Consensus 188 ---~~~~~~~~~~~~~~~~~~~~~~~~~--~~~----~~~--~~~~~a~~~g~~g~~v~v~~~~~~~~~~~--~~~~~~~ 254 (663) ........+................ ... ... ...........++ .+.+........... .....+. T Consensus 237 tv~v~~~~~~vg~~v~~~~~~~~~~~~~~~~~~v~~~~~~~~t~~~~~~~~~~~g-~~~~~a~~~~~~~~~~~~~~~~~~ 315 (743) T protein:vir:10 237 NVVVADAGGGVGGSVVVTLANPGTGYNQGETLTIASAATGDGTDILVTVATLSDG-TIAITELKDWYLNTEIGSTGIKLG 315 (743) T ss_pred cccccccccccccccccccccccceeeeccccccccccccccccchhheeccccc-ceeeeecccccccchhhccccccc Confidence 0000000000000000000000000 000 000 0000000000000 000000000000000 0000000 Q ss_pred ccceecccceeEEEecccccccceeee-------ccCCcceeeEe-eeecccccccccchhhhhhhhcCCCceEEEEe-- Q lcl|Aclame:pro 255 FGGTRTSNARGVIQYGPMTDDQFAIIV-------RRDGIVVESTV-LSTRKGDRDVYGSNIFMDDYFRNGGSNFIFAS-- 324 (663) Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~s~~v~~~-- 324 (663) .....+.........+...+.....+. ...+.+.+.+. ++...+.+...+...++...++.. +.++... T Consensus 316 ~~~~~~~t~~~~~~~~~~~d~~~v~v~~~~~~~~~~~~~v~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~-s~~~~~~~~ 394 (743) T protein:vir:10 316 DIGPRPGTSQFATDNGITDDQVHFAVIDTTGELTGTANTIVERLTYLSKLSDARSEENANIYYKNVINEQ-SAYLYHGND 394 (743) T ss_pred cccccceeeeccccccccccceEEEEecCcceeeeccCceeEEEeeeecccccccccCcceeecceeccc-cceeeccCc Confidence 000011111111111111111111111 12233344442 344444444444444333333221 1111110 Q ss_pred -----------------------ecccCCccceeEEecCcccccccccchhhhHHHHHhhhhccccceeEEeeccCcCCh Q lcl|Aclame:pro 325 -----------------------SEGWPAGFTGIIQLGGGTSANADVGADELIKGWDLFSDREALHVNLMIAGACGSDGA 381 (663) Q Consensus 325 -----------------------~~~~~~~~~~~~~l~gg~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 381 (663) .............+.||.|+. ..+..++..+++.+...+.++++++++|+..+. . T Consensus 395 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gG~d~~-~~~~~~~~~~~~~~~~~~~~~~~ll~~p~~~~~-~ 472 (743) T protein:vir:10 395 AAVQIAASGEAWGQSSDQVLADAGTAFSRTTGYWVNLAGGNDDF-AYDAGEFGAAMDLFLDTEETEIDFVLMGGSMAD-E 472 (743) T ss_pred ccceeeeccccCccccceeeeecccccccccceEEEeecCcccc-ccchhHHHHHHHHhhhccccCcceEEecCcccC-c Confidence 001111223345677777653 345567778888888888888889998887554 3 Q ss_pred hHHHHHHHHHHHHHHhhCCeEEEeccccccccccc------ccccHHHHHHHHhhcccccchhhhccCcCcceEEEecCc Q lcl|Aclame:pro 382 EIASTVQKYVVSLADDRQDCVAIVNPPAELMVGIP------TSTAVKNIVEWRNGMTGSGEVVDNNMNISSTYAFIIGNY 455 (663) Q Consensus 382 ~~~~~~~~~~~~~~~~~~~~~~i~d~p~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~p~ 455 (663) .+..+++++|++||+++++||+|+|+|.+...... ...+.+++..|++. +++|+|+++|||| T Consensus 473 ~~~~~v~~a~~~~~~~~~~~~a~~d~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~s~~~~~~~p~ 540 (743) T protein:vir:10 473 ADTKSKATKVIAIAASRKDALAFVSPHKGNQIASTGNVALSSAQQKENTIAFFSD------------LTSTSYAVFDSGY 540 (743) T ss_pred cchHHHHHHHHHHHHhhCCeEEEEecCCCccccccccccccccccchHHHHHHHh------------ccCCeeEEEEccc Confidence 45567899999999999999999999986544332 23344555556543 4789999999999 Q ss_pred eeecccccCceeEechHHHHHHHHHhhhhccCceecccceecceeecceeeeeecChhhhhhhhhCCceEEEEeeCCCcE Q lcl|Aclame:pro 456 KYQYDKYNDINRWVPLAADIAGLCAYTDQVSHPWMSPAGYRRGQIRNCIKLAIEPKQSMRDTMYQVAINPVTGFAGGDGF 535 (663) Q Consensus 456 ~~~~d~~~~~~~~~p~s~~~AG~~a~~d~~~g~~~span~~~~~i~~~~~~~~~~~~~~~~~Ln~~~in~i~~~~~~~G~ 535 (663) ++++|+.++..+++|||+++||+|||+|.++||||||+|+++++|.|++++++.+++.|++.||++|||||++|++ +|| T Consensus 541 ~~~~d~~~~~~~~~p~s~~~AGl~a~~D~~~g~~~span~~~~gi~g~~~~~~~~~~~~~~~Ln~~gIn~i~~~~~-~G~ 619 (743) T protein:vir:10 541 KYVYDRFTDKYRYIPCNGDVAGLCVQTSNQLDDWYSPAGLNRGGILNAVKLAYNPNKADRDELYQNRINPVVSLRG-QGI 619 (743) T ss_pred eeeeccccCceeEechhHHHHHHHHHhhccCCcEEccCCeeeeeeeccccceecCChhHHHhHhhCCceEEEEecC-CeE Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999997 799 Q ss_pred EEEcceecCCCCccceeeehhhHHHHHHHHHHHHHHHhhcccCCHHHHHHHHHHHHHHHHHHHhcCceEEEEEEEccCCC Q lcl|Aclame:pro 536 VLFGDKMATQVPSPFDRINVRRLFNMLKKNIGDTSKYELFENNDAFTRQSFRMETSQYLDGIRSLGGCYDFRVVCDTTNN 615 (663) Q Consensus 536 ~~wG~rT~~~~~~~~~~i~vrR~~~~i~~~~~~~~~~~v~epn~~~~~~~v~~~i~~~L~~l~~~gal~g~~v~~d~~~n 615 (663) ++||+||+++++++|||||+||||+||+++|+++++|+|||||++.+|++|+++|++||++||++|+|.||+|+||+++| T Consensus 620 ~~wG~rT~~s~d~~~~~i~vrR~~~~i~~si~~~~~~~v~e~n~~~~~~~i~~~i~~fL~~l~~~gal~~~~V~~d~~~n 699 (743) T protein:vir:10 620 TLFGDKTALAAPSAFDRINVRRLFLNLEKRARRLAEGVLFEQNDATTRAGFSSALNSYLSEVQARRGVTDYLVICDESNN 699 (743) T ss_pred EEEcccccCCCCcccceEeehhhHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhcCceeeeEEEEcCCCC Confidence 99999999877789999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred CHHHhhCCEEEEEEEEEecCcceEEEEEEEEeecccchhhhhhh Q lcl|Aclame:pro 616 TPNVIDRNEFVGTIYVKPPRSINYITLNMVATSTGANFDELIGP 659 (663) Q Consensus 616 t~~~i~~G~~~~~i~~~p~~p~e~i~~~~~~~~~~~~~~e~~~~ 659 (663) |++||++|+|+++|+++|++|+|||+|||+|++++.+|+|++++ T Consensus 700 t~~~i~~G~~~~~i~~~p~~pae~I~~~~~~~~~~~~~~e~~~~ 743 (743) T protein:vir:10 700 TPDIIDRNEFVAEVYVKPTRSINFITITFTATKTGVTFSEVVGR 743 (743) T ss_pred CHHHhhCCeEEEEEEEEecCCcceEEEEEEEeecCcchHhhhcC Confidence 99999999999999999999999999999999999999999999 No 15 >protein:vir:104858 Length: 729 # NCBI annotation: T4-like tail sheath protein # Family: family:all:661 # MgeID: mge:1630 # MgeName: P-SSM2 # Cross-refs: genbank:acc:YP_214361;genbank:gi:61806001;genbank:GeneID:3294378 Probab=100.00 E-value=9.3e-138 Score=771.84 Aligned_cols=643 Identities=30% Similarity=0.470 Sum_probs=386.9 Q ss_pred CceecCceEEEEecCCC-cccccCCCceEEEeecccCCCCcceEeCCHHHHHHHcCCcC--CCchhHHHHHHHHhcCCce Q lcl|Aclame:pro 1 MALLSPGIEMKETSINS-TVVRSATGRAAIVGKFAWGPAYEVRQVTNEVELVDMFGSPD--NVTAPYFMSAMNFLQYGND 77 (663) Q Consensus 1 ~~~~~PGVyveEv~~~~-~i~~v~Ts~~afvG~~~~Gpv~~p~~i~s~~e~~~~FG~~~--~~~~~~~~~~~~F~nGG~~ 77 (663) |+|++|||||||+|+++ +|++|+||++||||+|+|||+|+|++|+||.||+|+||+|. +.++++|++++||+|||++ T Consensus 3 ~~~~~PgVyv~e~~~~~~~i~~v~ts~~~fvG~~~~Gp~~~p~~i~s~~~~~~~fG~~~~~~~~~~~~~~~~~f~ngg~~ 82 (729) T protein:vir:10 3 LNLASPGIVVREVDLTIGRVDPTSGSIGALVAPFAKGPVNDPQLIESEEDLLQTFGQPYSTDKHYEYWMVASSYLAYGGT 82 (729) T ss_pred ccccCCceEEEEecCCCcccccccccceeEEeccccCCCccCeEcCCHHHHHHHcCccccCCcchhHHHHHHHHHhCCce Confidence 56999999999999876 69999999999999999999999999999999999999984 5678899999999999999 Q ss_pred EEEEEeccccccccccccccceeeeeccc--c-------------ccccccccccccccccccc-cceeeeeeeccccee Q lcl|Aclame:pro 78 LRLVRVIDMEKAKNASPLVNQVSVTITTE--G-------------QGYTVGDAITVKYNNATIT-EAGKVTAVDSDGKIK 141 (663) Q Consensus 78 ~~vvRv~~~~~~~~a~~~~~~~~~~~~~~--~-------------~~~~~~~~i~v~~~~~~~~-~~~~v~~~~~~g~~~ 141 (663) |||||+.++.+.................. . .....+....+.....+.+ ...++...+.... . T Consensus 83 ~~vvRv~~~~~~~a~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~G~~gn~~~v~v~~~~~~-~ 161 (729) T protein:vir:10 83 MQVVRADDYNTQTGVGLKNAFVTGGVGVGATMLRITSNTHYNQLGYDENTISGVSVAAKNPGTWANGIKVAIIDGKAD-Q 161 (729) T ss_pred EEEEecCcccccccccccccccccccccccccccccccccccccccccCCCcceEEEEeccCccccceeeEEecccCc-c Confidence 99999988654333221110000000000 0 0000111111112111111 1122221111100 0 Q ss_pred eeeecccchhc--cccccccccccee-ceeeeecccccceeeeeeccccc--cccccccccccccccccccccccccccc Q lcl|Aclame:pro 142 SLFVPTAEIIA--KTRQLGTYPTLGD-NWRIDVSGASGGSAAALALGNIV--VDSGVTFGNSEDAPAVMTSPAVMEKYAK 216 (663) Q Consensus 142 ~~~~~~~~~~~--~~~~~~t~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (663) ....+...... ............. ....................... ................ ........... T Consensus 162 ~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~s~~~~~~~~~~~~~-~~~~~~~~~~~ 240 (729) T protein:vir:10 162 ILTVASGNTTAVGSAVTQSISKTIGTATGTTTIDGVLKGIVTGSTDTTLEVKVISHISAAGVETAVEY-QQNGTYTFDNS 240 (729) T ss_pred eeeeeccccccceeeeeeeccccccccccceeeeeeecccccccccccccceecccccccccceeccc-cccceeeeccc Confidence 00000000000 0000000000000 00000000000000000000000 0000000000000000 00000000000 Q ss_pred ccccceeeecchhhccccccc---cccccccccccccceecccceecccceeEEEecccccccce-------eeeccCCc Q lcl|Aclame:pro 217 FGMPLISAVYPGEIGSTVEVE---IVSKTAFNSGAQQTIYPFGGTRTSNARGVIQYGPMTDDQFA-------IIVRRDGI 286 (663) Q Consensus 217 ~~~~~~~a~~~g~~g~~v~v~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~g~ 286 (663) ...........+......... ...............+......+.........+...+..+. ......+. T Consensus 241 ~s~~~~a~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~d~~~~~~~d~~~~~~~~~g~ 320 (729) T protein:vir:10 241 GSVNVIAAGSSGSGSAKSYTAQTDWFESQNIVLSNSTLEWDSIADAPGTSTYVSTRGGKNDEIHVLVIDDKGTITGNSGT 320 (729) T ss_pred CccceeeeccccccccccceeeeccccccccccccccccccccccccccccccccccccccccceeeeccccccccCccc Confidence 000000000000000000000 00000000000000000000001100000000000011111 11122333 Q ss_pred ceeeE-eeeecccccccccchhhhhhhhcCCCceEEEEee------------------------------cccCCcccee Q lcl|Aclame:pro 287 VVEST-VLSTRKGDRDVYGSNIFMDDYFRNGGSNFIFASS------------------------------EGWPAGFTGI 335 (663) Q Consensus 287 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~s~~v~~~~------------------------------~~~~~~~~~~ 335 (663) +.+.+ .++...+.+...+...+..+++... +.++.... ...+...... T Consensus 321 vve~~~~~s~~~~~~~~~~~~~~~~~vi~~~-s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~ 399 (729) T protein:vir:10 321 ILEKHLSLSKAKDAEYSVGSSSYWRDFLATN-SKYIFGGGATSGITTTGYSVSSTNTLDTDSGWDQNAEGVNFGASGVAT 399 (729) T ss_pred ceeeeeeeeeccccccccccccccceeeccc-cceeeecccccccccccccccccceeccccccccccccccccccceeE Confidence 33333 2344444444444444444443221 11111110 0001112233 Q ss_pred EEecCcccccc----------cccchhhhHHHHHhhhhccccceeEEeeccCcCChhHHHHHHHHHHHHHHhhCCeEEEe Q lcl|Aclame:pro 336 IQLGGGTSANA----------DVGADELIKGWDLFSDREALHVNLMIAGACGSDGAEIASTVQKYVVSLADDRQDCVAIV 405 (663) Q Consensus 336 ~~l~gg~d~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 405 (663) ..+.++.+... ..+..++..++..++..+.+.+.++++++.... ......++++|++||+++++||+++ T Consensus 400 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~v~~a~~~~~~~~~~~~a~~ 478 (729) T protein:vir:10 400 LTLAGGTNYGDKTDLTTSGALSSGVDDIISGYTLFENTEEIEVDFILMGAAHHP-KEQSQAVAEKVTAVAEARKDAVAFI 478 (729) T ss_pred EEeecccccccccccccccccccchhHHHHHHHHhhcccccccceeeecCCCCC-ccchHHHHHHHHHHHHhcCCeEEEe Confidence 45555554321 123445677888888888887877777765443 3456778899999999999999999 Q ss_pred ccccccccccc---------ccccHHHHHHHHhhcccccchhhhccCcCcceEEEecCceeecccccCceeEechHHHHH Q lcl|Aclame:pro 406 NPPAELMVGIP---------TSTAVKNIVEWRNGMTGSGEVVDNNMNISSTYAFIIGNYKYQYDKYNDINRWVPLAADIA 476 (663) Q Consensus 406 d~p~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~p~~~~~d~~~~~~~~~p~s~~~A 476 (663) |+|........ .....+++..|+..+ .+|+|+++||||++++|+.++..+++|||+++| T Consensus 479 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~p~~~~~d~~~~~~~~~p~s~~~a 546 (729) T protein:vir:10 479 SPYRQAFLNDTVSGTVTVSNIDQTTENVVGFYAPL------------SSSTYSVFDSGYKYMFDRFNNTFRYVPLNGDIA 546 (729) T ss_pred cccccccccccccccccccccchhhHHHHHHHhhc------------cCCceEEEEcCeeEEecccCCceEEechhHHHH Confidence 99875444322 223334455555432 468899999999999999999999999999999 Q ss_pred HHHHhhhhccCceecccceecceeecceeeeeecChhhhhhhhhCCceEEEEeeCCCcEEEEcceecCCCCccceeeehh Q lcl|Aclame:pro 477 GLCAYTDQVSHPWMSPAGYRRGQIRNCIKLAIEPKQSMRDTMYQVAINPVTGFAGGDGFVLFGDKMATQVPSPFDRINVR 556 (663) Q Consensus 477 G~~a~~d~~~g~~~span~~~~~i~~~~~~~~~~~~~~~~~Ln~~~in~i~~~~~~~G~~~wG~rT~~~~~~~~~~i~vr 556 (663) |+|||+|.++||||||+|+++++|.|+.++++.++++|++.||++|||||++|++ +|+++||+||+++.+++|+|||+| T Consensus 547 Gl~a~~d~~~g~~~span~~~~~i~g~~~~~~~~~~~~~~~Ln~~gIn~i~~~~~-~G~~~wG~rT~~~~d~~~~~i~vr 625 (729) T protein:vir:10 547 GTCARTDIEQFPWFSPAGTARGPILNSVKLVYNPGKKQRDILYSNRINPVILSPG-AGIILFGDKTGFGKSSAFDRINVR 625 (729) T ss_pred HHHHHhhccCCcEEccCCccccceecccceeeecChhhHhhhhhCCceEEEEecC-CeEEEEcceecCCCCcccceeehh Confidence 9999999999999999999999999999999999999999999999999999997 799999999997666799999999 Q ss_pred hHHHHHHHHHHHHHHHhhcccCCHHHHHHHHHHHHHHHHHHHhcCceEEEEEEEccCCCCHHHhhCCEEEEEEEEEecCc Q lcl|Aclame:pro 557 RLFNMLKKNIGDTSKYELFENNDAFTRQSFRMETSQYLDGIRSLGGCYDFRVVCDTTNNTPNVIDRNEFVGTIYVKPPRS 636 (663) Q Consensus 557 R~~~~i~~~~~~~~~~~v~epn~~~~~~~v~~~i~~~L~~l~~~gal~g~~v~~d~~~nt~~~i~~G~~~~~i~~~p~~p 636 (663) ||++||+++|+++++|+||||||+.+|++|+++|++||++||++|+|.||+|+||+++||++||++|+|+++|+++|++| T Consensus 626 R~~~~i~~si~~~~~~~v~epn~~~~~~~i~~~i~~~L~~l~~~g~l~g~~v~~d~~~nt~~~i~~G~~~~~v~~~p~~p 705 (729) T protein:vir:10 626 RLFIYLEDAISAAAKDQLFEFNDELTRTNFVNIVEPFLRDVQAKRGIFDFVVICDETNNTAAVIDSNEFVADIFIKPARS 705 (729) T ss_pred hhHHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhccceeeeEEEEcCCCCCHHHhhCCeEEEEEEEEecCC Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred ceEEEEEEEEeecccchhhhhhhh Q lcl|Aclame:pro 637 INYITLNMVATSTGANFDELIGPM 660 (663) Q Consensus 637 ~e~i~~~~~~~~~~~~~~e~~~~~ 660 (663) +|||+|||+|++++++|+|++++| T Consensus 706 ~e~i~~~~~~~~~~~~~~e~~~~~ 729 (729) T protein:vir:10 706 INFIGLTFVATRTGVAFEEVIGSV 729 (729) T ss_pred ccEEEEEEEEeecCccHHHHHhcC Confidence 999999999999999999999999 No 16 >protein:vir:79092 Length: 477 # NCBI annotation: gp13, phage tail sheath protein # Family: family:all:115 # MgeID: mge:1862 # MgeName: phiE255 # Cross-refs: genbank:acc:YP_001111213;genbank:gi:134288804;genbank:GeneID:4960766 Probab=100.00 E-value=8.1e-108 Score=607.69 Aligned_cols=470 Identities=18% Similarity=0.155 Sum_probs=326.8 Q ss_pred Cc-eecCceEEEEecCCC-cccccCCCceEEEeecccCCCCcceEeCCHHHHHHHcCCcCCCchhHHHHHHHHhcCCceE Q lcl|Aclame:pro 1 MA-LLSPGIEMKETSINS-TVVRSATGRAAIVGKFAWGPAYEVRQVTNEVELVDMFGSPDNVTAPYFMSAMNFLQYGNDL 78 (663) Q Consensus 1 ~~-~~~PGVyveEv~~~~-~i~~v~Ts~~afvG~~~~Gpv~~p~~i~s~~e~~~~FG~~~~~~~~~~~~~~~F~nGG~~~ 78 (663) |+ |++|||||||++++. +|.+|+|+|++|||++++||+|+|++|+||.||++ ||+.....++++++++||.|||++| T Consensus 1 M~~~~~pGVyv~E~~~g~~~I~~v~Tsv~~~VG~a~~~p~n~pv~its~~d~~~-~g~~~~~~tL~~Av~~~f~ngg~~~ 79 (477) T protein:vir:79 1 MAANYLHGVETIEKETGSRPVKVVKSAVIGLIGTAPIGPVNTPVQSLSDVDAAQ-FGPQLAGFTIPQALDAVYDYGSGTV 79 (477) T ss_pred CcCCCCCCeEEEEecCCcccccccCCceEEEEeecccCCCcccEEEccHHHHHH-hcCCCCCCcHHHHHHHHhhcCCceE Confidence 88 789999999999876 59999999999999999999999999999999986 7888888999999999999999999 Q ss_pred EEEEeccccccccccccccceeeeeccccccccccccccccccccccccceeeeeeecccceeeeeecccchhccccccc Q lcl|Aclame:pro 79 RLVRVIDMEKAKNASPLVNQVSVTITTEGQGYTVGDAITVKYNNATITEAGKVTAVDSDGKIKSLFVPTAEIIAKTRQLG 158 (663) Q Consensus 79 ~vvRv~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~v~~~~~~g~~~~~~~~~~~~~~~~~~~~ 158 (663) |||||.+.......... .... . .... ..... . T Consensus 80 ~vvrV~~~~~~~~~~a~------~~~~------~--------~~~~--~~~~~------------------------~-- 111 (477) T protein:vir:79 80 IVINVLDPAVHKSNAAS------ESVT------F--------DAAT--GRAKL------------------------A-- 111 (477) T ss_pred EEEeccCCccccccccc------cccc------c--------cccc--ccccc------------------------c-- Confidence 99999765432111000 0000 0 0000 00000 0 Q ss_pred ccccceeceeeeecccccceeeeeecccccccccccccccccccccccccccccccccccccceeeecchhhcccccccc Q lcl|Aclame:pro 159 TYPTLGDNWRIDVSGASGGSAAALALGNIVVDSGVTFGNSEDAPAVMTSPAVMEKYAKFGMPLISAVYPGEIGSTVEVEI 238 (663) Q Consensus 159 t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~g~~g~~v~v~~ 238 (663) . .......+...... ..... +....+.. T Consensus 112 --~--~~~~~~~v~~~~~~--------------------~~~~~----------------------------~~~~~~~~ 139 (477) T protein:vir:79 112 --H--PAAANLVLKNDSGG--------------------TTYTE----------------------------GTDYAVDL 139 (477) T ss_pred --c--cccceeEEeecccc--------------------ccccc----------------------------Cccccccc Confidence 0 00000000000000 00000 00000000 Q ss_pred ccccccccccccceecccceecccceeEEEecccccccceeeeccCCcceeeEeeeecccccccccchhhhhhhhcCCCc Q lcl|Aclame:pro 239 VSKTAFNSGAQQTIYPFGGTRTSNARGVIQYGPMTDDQFAIIVRRDGIVVESTVLSTRKGDRDVYGSNIFMDDYFRNGGS 318 (663) Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s 318 (663) ....... . . .. ..+............. . .. T Consensus 140 ~~~~~~~-------~---~-----------~~------------~~~~~~~~~~~~~~~~----------------~-~~ 169 (477) T protein:vir:79 140 INGVITR-------I---K-----------TG------------TIPAAATAAKATYDYA----------------D-PT 169 (477) T ss_pred cchhhhh-------h---h-----------cc------------ccccccceeeceeccC----------------C-cc Confidence 0000000 0 0 00 0000000000000000 0 00 Q ss_pred eEEEEeecccCCccceeEEecCcccccccccchhhhHHHHHhhhhccccceeEEeeccCcCChhHHHHHHHHHHHHHHhh Q lcl|Aclame:pro 319 NFIFASSEGWPAGFTGIIQLGGGTSANADVGADELIKGWDLFSDREALHVNLMIAGACGSDGAEIASTVQKYVVSLADDR 398 (663) Q Consensus 319 ~~v~~~~~~~~~~~~~~~~l~gg~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 398 (663) ........+..+ ..+...+..++...+......+.++..|+... ...++.+|.++|+++ T Consensus 170 -------------~~~~~~~~g~~~---a~~~~tg~~al~~~~~~~~~~~~iv~apg~~~-----~~~v~~~l~~~~~~~ 228 (477) T protein:vir:79 170 -------------KVTAADIIGAVN---AAGMRTGMKALKDTYNLYGYFSKILIAPAYCT-----QNSVSVELEAMAVQL 228 (477) T ss_pred -------------cceeeeeccccc---ccccchhhhhhhhhhhhcccccceeecccccc-----chhHHHHHHHHHhhc Confidence 000000111111 11223444555555555555556655554432 245678899999987 Q ss_pred CCeEEEecccccccccccccccHHHHHHHHhhcccccchhhhccCcCcceEEEecCceeecccccCceeEechHHHHHHH Q lcl|Aclame:pro 399 QDCVAIVNPPAELMVGIPTSTAVKNIVEWRNGMTGSGEVVDNNMNISSTYAFIIGNYKYQYDKYNDINRWVPLAADIAGL 478 (663) Q Consensus 399 ~~~~~i~d~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~p~~~~~d~~~~~~~~~p~s~~~AG~ 478 (663) + ||+++|+|.+ .+.+++.+|+..... ...+++|+|+++||||++++|+.++..+++|||+++||+ T Consensus 229 ~-~~a~~d~p~~--------~~~~~~~~~~~~~~~------~~~~~~s~~~~~~~p~~~~~~~~~~~~~~~p~s~~~ag~ 293 (477) T protein:vir:79 229 G-AIAYIDAPIG--------TTLAQALAGRGPAGT------INFNTSSDRVRLCYPHVKVYDIATNAERLEPLSSRAAGL 293 (477) T ss_pred C-eEEEEecCCC--------CChHHHhhhhhhccc------cccccccceEEEEcCeeEEecccCCceeeechHHHHHHH Confidence 5 9999999854 345777888865432 345789999999999999999999999999999999999 Q ss_pred HHhhhhccCceecccceecceeecce---eeeeecChhhhhhhhhCCceEEEEeeCCCcEEEEcceecC--CCCccceee Q lcl|Aclame:pro 479 CAYTDQVSHPWMSPAGYRRGQIRNCI---KLAIEPKQSMRDTMYQVAINPVTGFAGGDGFVLFGDKMAT--QVPSPFDRI 553 (663) Q Consensus 479 ~a~~d~~~g~~~span~~~~~i~~~~---~~~~~~~~~~~~~Ln~~~in~i~~~~~~~G~~~wG~rT~~--~~~~~~~~i 553 (663) +||+|.++||||||+|+++.++.++. ......++.|++.||++|||+|++|++ +|+++||+||++ +++++|||+ T Consensus 294 ~a~~d~~~g~~~span~~~~gv~~~~~~~~~~~~~~~~~~~~L~~~~i~~i~~~~~-~G~~~wG~rT~~~~~~~~~~~~i 372 (477) T protein:vir:79 294 RARVDLDKGYWWSSSNQQLVGVTGVERPLSAMIDDPQSDVNMLNEQGITTVFSSYG-SGLRLWGNRTAAWPTVTHMRNFE 372 (477) T ss_pred HHHhhccCCceEccCCceeecceecccccccccCCChhhHHHHhhCCceEEEEecC-CcEEEEcccccCCCCCCccceee Confidence 99999999999999999987776642 223445678999999999999999997 799999999995 344579999 Q ss_pred ehhhHHHHHHHHHHHHHHHhhcccCCHHHHHHHHHHHHHHHHHHHhcCceEEEEEEEccCCCCHHHhhCCEEEEEEEEEe Q lcl|Aclame:pro 554 NVRRLFNMLKKNIGDTSKYELFENNDAFTRQSFRMETSQYLDGIRSLGGCYDFRVVCDTTNNTPNVIDRNEFVGTIYVKP 633 (663) Q Consensus 554 ~vrR~~~~i~~~~~~~~~~~v~epn~~~~~~~v~~~i~~~L~~l~~~gal~g~~v~~d~~~nt~~~i~~G~~~~~i~~~p 633 (663) |+||+++||+++|++.++|+|||||++.+|++|+++|++||++||++|+|+||+|+||+++||++||++|+|+++|+++| T Consensus 373 ~vrR~~~~i~~~~~~~~~~~v~e~~~~~~~~~i~~~i~~~l~~l~~~g~l~g~~v~~~~~~nt~~~i~~G~~~~~i~~~p 452 (477) T protein:vir:79 373 NVRRTGDVINESLRYFSQQFVDAPIDQGLIDSLVESVNGFGRKLIGDGALLGFKAWFDPARNPKEELAAGHLLINYKYTV 452 (477) T ss_pred ehhhHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeEEEEecCCCCHHHhhCCeEEEEEEEEe Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred cCcceEEEEEEEEeecccchhhhhhhh Q lcl|Aclame:pro 634 PRSINYITLNMVATSTGANFDELIGPM 660 (663) Q Consensus 634 ~~p~e~i~~~~~~~~~~~~~~e~~~~~ 660 (663) ++|+|||+|++++.... |+++.+=- T Consensus 453 ~~p~e~i~~~~~~~~~~--~~~~~~~~ 477 (477) T protein:vir:79 453 PPPLERLTYETEITSEY--LLTLKGGN 477 (477) T ss_pred cCCceeEEEEEEEechH--HhhhccCC Confidence 99999999999998775 44443322 No 17 >protein:vir:107865 Length: 477 # NCBI annotation: gp39 # Family: family:all:115 # MgeID: mge:1565 # MgeName: BcepMu # Cross-refs: genbank:acc:YP_024712;genbank:gi:48696949;genbank:GeneID:2845953 Probab=100.00 E-value=1.3e-106 Score=601.11 Aligned_cols=470 Identities=17% Similarity=0.130 Sum_probs=330.1 Q ss_pred Cc-eecCceEEEEecCCC-cccccCCCceEEEeecccCCCCcceEeCCHHHHHHHcCCcCCCchhHHHHHHHHhcCCceE Q lcl|Aclame:pro 1 MA-LLSPGIEMKETSINS-TVVRSATGRAAIVGKFAWGPAYEVRQVTNEVELVDMFGSPDNVTAPYFMSAMNFLQYGNDL 78 (663) Q Consensus 1 ~~-~~~PGVyveEv~~~~-~i~~v~Ts~~afvG~~~~Gpv~~p~~i~s~~e~~~~FG~~~~~~~~~~~~~~~F~nGG~~~ 78 (663) |+ |++|||||||++++. +|.+|+|+|++|||++++||+|+|++|+||.|| +.||+.....++++++++||.|||++| T Consensus 1 M~~~~~pGVyv~E~~~~~~~i~~v~T~v~~~VG~a~~gp~n~pv~its~~d~-~~~g~~~~~~tL~~Av~~~f~nGg~~~ 79 (477) T protein:vir:10 1 MAANYLHGVETIEKETGSRPVKVVKSAVIGLIGTAPIGPVNTPVQSLSDVDA-AQFGPQLAGFTIPQALDAVYDYGSGTV 79 (477) T ss_pred CcccCCCCeEEEEccCCcccccccCCceeEEEecccCCCCCcCEEEccHHHH-HHhccCCCCCcHHHHHHHHHhccceEE Confidence 88 779999999999876 599999999999999999999999999999999 569999999999999999999999999 Q ss_pred EEEEeccccccccccccccceeeeeccccccccccccccccccccccccceeeeeeecccceeeeeecccchhccccccc Q lcl|Aclame:pro 79 RLVRVIDMEKAKNASPLVNQVSVTITTEGQGYTVGDAITVKYNNATITEAGKVTAVDSDGKIKSLFVPTAEIIAKTRQLG 158 (663) Q Consensus 79 ~vvRv~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~v~~~~~~g~~~~~~~~~~~~~~~~~~~~ 158 (663) |||||.+......... ... . ... ... T Consensus 80 ~vVrV~~~~~~~~~~~------------------~~~-------~--------~~~--------------------~~~- 105 (477) T protein:vir:10 80 IVINVLDPAVHKSNAA------------------NEP-------V--------TFD--------------------AAT- 105 (477) T ss_pred EEEecCcccccccccc------------------ccc-------c--------ccc--------------------ccc- Confidence 9999976532111000 000 0 000 000 Q ss_pred ccccceeceeeeecccccceeeeeecccccccccccccccccccccccccccccccccccccceeeecchhhcccccccc Q lcl|Aclame:pro 159 TYPTLGDNWRIDVSGASGGSAAALALGNIVVDSGVTFGNSEDAPAVMTSPAVMEKYAKFGMPLISAVYPGEIGSTVEVEI 238 (663) Q Consensus 159 t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~g~~g~~v~v~~ 238 (663) . .... . . .+.....+.. T Consensus 106 --------~--~~~~-~----------------~------------------------------------~~~~~~~v~~ 122 (477) T protein:vir:10 106 --------G--RAKL-A----------------H------------------------------------PAAANLVLKN 122 (477) T ss_pred --------c--eecc-c----------------c------------------------------------cccccccccc Confidence 0 0000 0 0 0000000000 Q ss_pred ccccccccccccceecccceecccceeEEEecccccccceeeeccCCcceeeEeeeecccccccccchhhhhhhhcCCCc Q lcl|Aclame:pro 239 VSKTAFNSGAQQTIYPFGGTRTSNARGVIQYGPMTDDQFAIIVRRDGIVVESTVLSTRKGDRDVYGSNIFMDDYFRNGGS 318 (663) Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s 318 (663) .... . ............ ............... .. T Consensus 123 ~a~~-------~-------~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~-------------------~~ 156 (477) T protein:vir:10 123 DSGG-------T-------TYAEGTDYAVDL-------------INGVITRIKTGTIPP-------------------GA 156 (477) T ss_pred cccc-------c-------ccccchhhhhhh-------------ccccceecccccccc-------------------cc Confidence 0000 0 000000000000 000000000000000 00 Q ss_pred eEEEEeecccCCccceeEEecCcccccccccchhhhHHHHHhhhhccccceeEEeeccCcCChhHHHHHHHHHHHHHHhh Q lcl|Aclame:pro 319 NFIFASSEGWPAGFTGIIQLGGGTSANADVGADELIKGWDLFSDREALHVNLMIAGACGSDGAEIASTVQKYVVSLADDR 398 (663) Q Consensus 319 ~~v~~~~~~~~~~~~~~~~l~gg~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 398 (663) ...................+.+..+ ..+..+++.++...+......+.++.+++.... ..++.+|.++|+++ T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~g~~~---~~~~~tGl~al~~~~~~~~~~~~~l~apg~~~~-----~~v~~~l~~~~~~~ 228 (477) T protein:vir:10 157 TAAKATYDYADPTKVTAADIIGAVN---AAGMRTGMKALKDTYNLYGYFSKILIAPAYCTQ-----NSVSVELEAMAVQL 228 (477) T ss_pred eeeeecccccccccccccccccccc---ccchhhhhhhhhhhhhhcchhcccccccccccc-----hhhHHHHHHHHhhC Confidence 0000000000000000111111111 123344555655555444445556666654332 34678899999987 Q ss_pred CCeEEEecccccccccccccccHHHHHHHHhhcccccchhhhccCcCcceEEEecCceeecccccCceeEechHHHHHHH Q lcl|Aclame:pro 399 QDCVAIVNPPAELMVGIPTSTAVKNIVEWRNGMTGSGEVVDNNMNISSTYAFIIGNYKYQYDKYNDINRWVPLAADIAGL 478 (663) Q Consensus 399 ~~~~~i~d~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~p~~~~~d~~~~~~~~~p~s~~~AG~ 478 (663) + ||+++|.|.+ .+.+++++|++.... ...+++|+|+++||||+++.|+.++..+++|||+++||+ T Consensus 229 ~-~~~~~d~p~~--------~~~~~~~~~~~~~~~------~~~~~~s~~~~~~~p~~~~~d~~~~~~~~~p~s~~~ag~ 293 (477) T protein:vir:10 229 G-AIAYIDAPIG--------TTLAQALAGRGPAGT------INFNTSSDRVRLCYPHVKVYDTATNAERLEPLSSRAAGL 293 (477) T ss_pred C-EEEEEecCCC--------CCHHHHHhhhhhccc------cccccccceEEEEcCeEEEecccCCceeEEchHHHHHHH Confidence 6 8999999854 345788888875432 345788999999999999999999999999999999999 Q ss_pred HHhhhhccCceecccceecceeeccee---eeeecChhhhhhhhhCCceEEEEeeCCCcEEEEcceecCC--CCccceee Q lcl|Aclame:pro 479 CAYTDQVSHPWMSPAGYRRGQIRNCIK---LAIEPKQSMRDTMYQVAINPVTGFAGGDGFVLFGDKMATQ--VPSPFDRI 553 (663) Q Consensus 479 ~a~~d~~~g~~~span~~~~~i~~~~~---~~~~~~~~~~~~Ln~~~in~i~~~~~~~G~~~wG~rT~~~--~~~~~~~i 553 (663) +||+|+++||||||+|+++.+|.++.. .....++.|++.||++|||+|++|++ +||++||+||++. +++.|+|+ T Consensus 294 ~a~~d~~~g~~~span~~~~gi~~~~~~~~~~~~~~~~~~~~L~~~gi~~i~~~~~-~G~~~wG~rT~~~~~~~~~~~~~ 372 (477) T protein:vir:10 294 RARVDLDKGYWWSSSNQQLVGVTGVERPLSAMIDDPQSDVNMLNEQGITTVFSSYG-SGLRLWGNRTAAWPTVTHMRNFE 372 (477) T ss_pred HHHhhhcCCceeccCCceeccccccccccccccCCChhhHHHHhhCCceEEEEecC-CcEEEEcccccCCCCCCccccee Confidence 999999999999999999887777522 23344678899999999999999997 7999999999954 33579999 Q ss_pred ehhhHHHHHHHHHHHHHHHhhcccCCHHHHHHHHHHHHHHHHHHHhcCceEEEEEEEccCCCCHHHhhCCEEEEEEEEEe Q lcl|Aclame:pro 554 NVRRLFNMLKKNIGDTSKYELFENNDAFTRQSFRMETSQYLDGIRSLGGCYDFRVVCDTTNNTPNVIDRNEFVGTIYVKP 633 (663) Q Consensus 554 ~vrR~~~~i~~~~~~~~~~~v~epn~~~~~~~v~~~i~~~L~~l~~~gal~g~~v~~d~~~nt~~~i~~G~~~~~i~~~p 633 (663) ++||+++||+++|+++++|+|||||++.+|++|+++|++||++||++|+|.||+|+||+++||++||++|+|+++|+++| T Consensus 373 ~vrR~~~~i~~~~~~~~~~~v~~~~~~~~~~~i~~~i~~~l~~l~~~g~l~g~~v~~~~~~nt~~~i~~G~~~~~i~~~p 452 (477) T protein:vir:10 373 NVRRTGDVINESLRYFSQQFVDAPIDQGLIDSLVESVNGFGRKLIGDGALLGFKAWFDPARNPKEELAAGHLLINYKYTV 452 (477) T ss_pred ehhhHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeEEEEecCCCCHHHhhCCeEEEEEEEEe Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred cCcceEEEEEEEEeecccchhhhhhhh Q lcl|Aclame:pro 634 PRSINYITLNMVATSTGANFDELIGPM 660 (663) Q Consensus 634 ~~p~e~i~~~~~~~~~~~~~~e~~~~~ 660 (663) ++|+|||+|++++.... |+|+.+-- T Consensus 453 ~~p~e~i~~~~~~~~~~--~~~~~~g~ 477 (477) T protein:vir:10 453 PPPLERLTYETEITSEY--LLTLKGGN 477 (477) T ss_pred cCCcceEEEEEEEcchH--HhhhhcCC Confidence 99999999999997663 55554433 No 18 >protein:vir:98824 Length: 774 # NCBI annotation: putative phage tail sheath protein # Family: family:all:661 # MgeID: mge:1530 # MgeName: Ma-LMM01 # Cross-refs: genbank:acc:YP_851105;genbank:gi:117530262;genbank:GeneID:4484488 Probab=100.00 E-value=1.7e-103 Score=584.00 Aligned_cols=458 Identities=15% Similarity=0.124 Sum_probs=301.8 Q ss_pred CceecCceEEEEecCCC-cccc-cCCCceEEEeecccCCCCcceEeCCHHHHHHHcCCcCCCchhHHHHHHHHhcCCceE Q lcl|Aclame:pro 1 MALLSPGIEMKETSINS-TVVR-SATGRAAIVGKFAWGPAYEVRQVTNEVELVDMFGSPDNVTAPYFMSAMNFLQYGNDL 78 (663) Q Consensus 1 ~~~~~PGVyveEv~~~~-~i~~-v~Ts~~afvG~~~~Gpv~~p~~i~s~~e~~~~FG~~~~~~~~~~~~~~~F~nGG~~~ 78 (663) -+|..|||||||+|+++ +|++ |+||++||||.++|||+|+|++|+||.||.+.||..... ++|+++| T Consensus 281 ~~v~~~GVYVEEVpSGvrtIeGGV~TSVAAFVG~A~rGPvn~PvlITS~aD~~~~Fg~~~GG-----------l~GassA 349 (774) T protein:vir:98 281 RNVEDNGVVIQLEPALTGSISNRFSFYVTANDNTANRGFTTSPALVTTIPDPAIHFTSFQGG-----------LDGPRSA 349 (774) T ss_pred EEEecCceEEEEeCCCCccccccccceeeeecccccCCCCCcCEEEeehhHhhhhhccccCC-----------cccccee Confidence 45899999999999986 4887 999999999999999999999999999977777654322 2466666 Q ss_pred EEEEeccccccccccccccceeeeeccccccccccccccccccccccccceeeeeeecccceeeeeecccchhccccccc Q lcl|Aclame:pro 79 RLVRVIDMEKAKNASPLVNQVSVTITTEGQGYTVGDAITVKYNNATITEAGKVTAVDSDGKIKSLFVPTAEIIAKTRQLG 158 (663) Q Consensus 79 ~vvRv~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~v~~~~~~g~~~~~~~~~~~~~~~~~~~~ 158 (663) |.+...... .+.+. T Consensus 350 ~r~~~~~sG--------~~~L~---------------------------------------------------------- 363 (774) T protein:vir:98 350 FRDFYTFNG--------TPLLR---------------------------------------------------------- 363 (774) T ss_pred eeeeeeecc--------cceEE---------------------------------------------------------- Confidence 532110000 00000 Q ss_pred ccccceeceeeeecccccceeeeeecccccccccccccccccccccccccccccccccccccceeeecchhhcccccccc Q lcl|Aclame:pro 159 TYPTLGDNWRIDVSGASGGSAAALALGNIVVDSGVTFGNSEDAPAVMTSPAVMEKYAKFGMPLISAVYPGEIGSTVEVEI 238 (663) Q Consensus 159 t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~g~~g~~v~v~~ 238 (663) +.+..+|.||+.+++.+ T Consensus 364 ---------------------------------------------------------------i~A~~pGawGN~ItV~I 380 (774) T protein:vir:98 364 ---------------------------------------------------------------LQAVSEGNWGNQVTVSI 380 (774) T ss_pred ---------------------------------------------------------------EEEeecCcCCCceEEEE Confidence 01111111111111111 Q ss_pred ccccc-----------------------cc-cccccceecccceecccceeEEEecccccccceeeeccCCcceeeEeee Q lcl|Aclame:pro 239 VSKTA-----------------------FN-SGAQQTIYPFGGTRTSNARGVIQYGPMTDDQFAIIVRRDGIVVESTVLS 294 (663) Q Consensus 239 ~~~~~-----------------------~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 294 (663) ..... .. .......... ........... ........ ........+. T Consensus 381 ~~~t~~~~~l~v~~~~~s~f~~~~a~e~~tv~~~~~~~~~~-v~e~~dn~~i~--~~~~~~~~-------~~in~vs~lv 450 (774) T protein:vir:98 381 YPVNNSEFRLNVQDLNGSAFNPPLADEVYTVKLGDTNESGE-LNALLDSKFIR--GFFLPKSI-------DSINYDAALV 450 (774) T ss_pred EecCCceeEEEEEecCCccccccccceeEEEecccccccce-eeeeeceeeEe--eccccccc-------cccccccccc Confidence 00000 00 0000000000 00000000000 00000000 0000000000 Q ss_pred ecccccccccchhhhhhhhcCCCceEE-EEeecccCCccceeEEecCcccccccccchhhhHHHHHhhhhccccceeEEe Q lcl|Aclame:pro 295 TRKGDRDVYGSNIFMDDYFRNGGSNFI-FASSEGWPAGFTGIIQLGGGTSANADVGADELIKGWDLFSDREALHVNLMIA 373 (663) Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~s~~v-~~~~~~~~~~~~~~~~l~gg~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 373 (663) ...... ............ ..............+.+.+|.|+.. .+..++..+.+..+. . .+.+++. T Consensus 451 ~~~~~~---------~a~~d~~~~~~~~~~~~~~~~~~~~v~v~lagG~Dg~~-tt~~~igg~~~~~~~-t--gi~aLl~ 517 (774) T protein:vir:98 451 RQSPLR---------LAPPDESETDVENPAHVDFYGPNVLVDVTLENGYDGPP-VTNDDYVSIIRTLEN-Q--PVHILLV 517 (774) T ss_pred ccchhc---------ccccccccccccccccccccCCcceEEEeecCCCCccc-ccchheecccccccc-c--ceeEEEc Confidence 000000 000000000000 0000111112223456777766543 333334333333322 2 2333433 Q ss_pred eccCcCChhHHHHHHHHHHHHHHh----hCCeEEEecccccccccccccccHHHHHHHHhhcccccchhhhccCcCcceE Q lcl|Aclame:pro 374 GACGSDGAEIASTVQKYVVSLADD----RQDCVAIVNPPAELMVGIPTSTAVKNIVEWRNGMTGSGEVVDNNMNISSTYA 449 (663) Q Consensus 374 ~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~i~d~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~ 449 (663) +.. . ..++.+++.||+. +++||+++|.|.+ .+.+++++|+++ ++|+|+ T Consensus 518 a~~-~------~~V~~aii~~~e~~~~~~~~r~avid~p~g--------~t~~~Ai~~r~~-------------f~S~~a 569 (774) T protein:vir:98 518 GTT-N------VGVQQALITEAERASDSDGLRIAVLAAPPR--------TTPTLAASVTRG-------------FNSTRA 569 (774) T ss_pred Ccc-c------hhhHHHHHHHHHHhhhcccceEEEEECCCC--------CCHHHHHHHHhc-------------cCCceE Confidence 221 1 2245556666665 4889999998864 356788899864 678999 Q ss_pred EEecCceeecccccCceeEechHHHHHHHHHhhhhccCceecccceecceeecce---eeeeecChhhhhhhhhCCceEE Q lcl|Aclame:pro 450 FIIGNYKYQYDKYNDINRWVPLAADIAGLCAYTDQVSHPWMSPAGYRRGQIRNCI---KLAIEPKQSMRDTMYQVAINPV 526 (663) Q Consensus 450 ~~~~p~~~~~d~~~~~~~~~p~s~~~AG~~a~~d~~~g~~~span~~~~~i~~~~---~~~~~~~~~~~~~Ln~~~in~i 526 (663) ++||||++++|+.+++.+++|||+++||++||+| |||||+|+++.++.+.. .+....++.|++.||+++|||+ T Consensus 570 al~~Pwvkv~D~~~g~~~~vPpSg~vAGl~ArtD----v~kSPANk~I~Givg~ai~~~l~~~~t~ae~d~Ln~~gIN~i 645 (774) T protein:vir:98 570 VMVAGWFTYAGQPNSSRYGVPGAAVYAGKLAAID----FFVSPAARSLVGPLFNIIESDTDNYTSRSNQDIYSAARLEVL 645 (774) T ss_pred EEEeCcEEEeccCCCceeecChhHHHHHHHHhcC----cccccCCceeecceeccccccccccccchhhhhhccccccee Confidence 9999999999999999999999999999999999 99999999877766532 2445567899999999999999 Q ss_pred E-EeeCCCcEEEEcceecCCCCccceeeehhhHHHHHHHHHHHHHHHhhcccCCHHHHHHHHHHHHHHHHHHHhcCceEE Q lcl|Aclame:pro 527 T-GFAGGDGFVLFGDKMATQVPSPFDRINVRRLFNMLKKNIGDTSKYELFENNDAFTRQSFRMETSQYLDGIRSLGGCYD 605 (663) Q Consensus 527 ~-~~~~~~G~~~wG~rT~~~~~~~~~~i~vrR~~~~i~~~~~~~~~~~v~epn~~~~~~~v~~~i~~~L~~l~~~gal~g 605 (663) + .+++ +|+++||+||+++|+ +||||++||+++||+++|++.++|+|||||++.+|++|+++|+.||++||++|+|.| T Consensus 646 ~itt~g-~G~rvWG~RTlssDp-~wr~InVRRlfd~Ie~SI~~~~~~~VfEPNd~~l~~~I~~sI~~fL~~L~~~GaL~G 723 (774) T protein:vir:98 646 SLDTVD-RTYRFASGVTLSTDP-AWERIYLRRVHDVVRQGAHAILRNYVAMPNSRLVRNQIAAALNAFMGELKRNGNIVS 723 (774) T ss_pred EEEEcC-CcEEEEcccccCCCc-ccceEeehhhHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCceec Confidence 8 5776 799999999998875 899999999999999999999999999999999999999999999999999999999 Q ss_pred EE-EEEccCCCCHHHhhCCEEEEEEEEEecCcceEEEEEEEEeecccchhh Q lcl|Aclame:pro 606 FR-VVCDTTNNTPNVIDRNEFVGTIYVKPPRSINYITLNMVATSTGANFDE 655 (663) Q Consensus 606 ~~-v~~d~~~nt~~~i~~G~~~~~i~~~p~~p~e~i~~~~~~~~~~~~~~e 655 (663) |+ |+||+++||+++|++|+|+++|+++|++|+|||+|||+|..++.+|+| T Consensus 724 ~~~V~~D~etNt~~dI~~G~l~i~I~vaP~~PAEfIilri~q~t~~~~l~E 774 (774) T protein:vir:98 724 FRPAIIDGSNNSTAAYFSRELYVSLQFQPLYSADYIYVTISRDTETSPLGE 774 (774) T ss_pred ceEEEEcCCCCCHHHhhCCEEEEEEEEEecCCcceEEEEEEEeecceeccC Confidence 87 899999999999999999999999999999999999999999999999 No 19 >protein:vir:79181 Length: 390 # NCBI annotation: gp30, phage tail sheath protein # Family: family:all:115 # MgeID: mge:1866 # MgeName: phiE202 # Cross-refs: genbank:acc:YP_001111061;genbank:gi:134288772;genbank:GeneID:4960700 Probab=100.00 E-value=1.1e-95 Score=541.22 Aligned_cols=380 Identities=13% Similarity=0.083 Sum_probs=303.1 Q ss_pred CceecCceEEEEecCCC-cccccCCCceEEEeecccC-----CCCcceEeCCHHHHHHHcCCcCCCchhHHHHHHHHhcC Q lcl|Aclame:pro 1 MALLSPGIEMKETSINS-TVVRSATGRAAIVGKFAWG-----PAYEVRQVTNEVELVDMFGSPDNVTAPYFMSAMNFLQY 74 (663) Q Consensus 1 ~~~~~PGVyveEv~~~~-~i~~v~Ts~~afvG~~~~G-----pv~~p~~i~s~~e~~~~FG~~~~~~~~~~~~~~~F~nG 74 (663) |+|.+|||||+|++.++ +|..++|++++|+|+++++ |+|+|++|+|+.+|.+.|| +..++++++.+||.|| T Consensus 2 ~~~~~~Gv~v~e~~~~~~~i~~~~tav~~~vg~a~dad~~~~p~n~pv~its~~~~~~~~g---~~~tL~~al~~~~~~~ 78 (390) T protein:vir:79 2 PQDYHHGVRVIEINEGGRPIRSVSTAVLGVVCTAADADASAFPLNTPVLLTNVVAALGKAG---KKGTLRRTLDAIGKQT 78 (390) T ss_pred ccccCCCeEEEEcCCCcccccccCCceeEEEEecCCCCccccccccceEeecHHHHHHhcC---CCccchhhhhhhcccc Confidence 66899999999999765 5999999999999999887 9999999999999999999 4677888999999999 Q ss_pred CceEEEEEeccccccccccccccceeeeeccccccccccccccccccccccccceeeeeeecccceeeeeecccchhccc Q lcl|Aclame:pro 75 GNDLRLVRVIDMEKAKNASPLVNQVSVTITTEGQGYTVGDAITVKYNNATITEAGKVTAVDSDGKIKSLFVPTAEIIAKT 154 (663) Q Consensus 75 G~~~~vvRv~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~v~~~~~~g~~~~~~~~~~~~~~~~ 154 (663) |..||+||+..+.....+ .. T Consensus 79 ~~~~~vv~v~~~~~~~~~-------------------~~----------------------------------------- 98 (390) T protein:vir:79 79 KPLTVVVRVAEGKDADET-------------------TS----------------------------------------- 98 (390) T ss_pred cceEEEEeeccccccccc-------------------cc----------------------------------------- Confidence 999999998543110000 00 Q ss_pred ccccccccceeceeeeecccccceeeeeecccccccccccccccccccccccccccccccccccccceeeecchhhcccc Q lcl|Aclame:pro 155 RQLGTYPTLGDNWRIDVSGASGGSAAALALGNIVVDSGVTFGNSEDAPAVMTSPAVMEKYAKFGMPLISAVYPGEIGSTV 234 (663) Q Consensus 155 ~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~g~~g~~v 234 (663) . . .+.. ... T Consensus 99 -~-------------~-------------ig~~------------~~~-------------------------------- 107 (390) T protein:vir:79 99 -N-------------V-------------IGTV------------TPD-------------------------------- 107 (390) T ss_pred -e-------------e-------------eecc------------ccc-------------------------------- Confidence 0 0 0000 000 Q ss_pred ccccccccccccccccceecccceecccceeEEEecccccccceeeeccCCcceeeEeeeecccccccccchhhhhhhhc Q lcl|Aclame:pro 235 EVEIVSKTAFNSGAQQTIYPFGGTRTSNARGVIQYGPMTDDQFAIIVRRDGIVVESTVLSTRKGDRDVYGSNIFMDDYFR 314 (663) Q Consensus 235 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (663) T Consensus 108 -------------------------------------------------------------------------------- 107 (390) T protein:vir:79 108 -------------------------------------------------------------------------------- 107 (390) T ss_pred -------------------------------------------------------------------------------- Confidence Q ss_pred CCCceEEEEeecccCCccceeEEecCcccccccccchhhhHHHHHhhhhccccceeEEeeccCcCChhHHHHHHHHHHHH Q lcl|Aclame:pro 315 NGGSNFIFASSEGWPAGFTGIIQLGGGTSANADVGADELIKGWDLFSDREALHVNLMIAGACGSDGAEIASTVQKYVVSL 394 (663) Q Consensus 315 ~~~s~~v~~~~~~~~~~~~~~~~l~gg~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 394 (663) +..+++.++...+....+.+.++++++... .+++.+|..+ T Consensus 108 ----------------------------------~~~tgl~al~~~~~~~~~~p~il~ap~~~~------~~v~~~l~~~ 147 (390) T protein:vir:79 108 ----------------------------------GKYTGIKALLAAQGALGVKPRILAAPGLDT------QPVAAALAAT 147 (390) T ss_pred ----------------------------------ccchhhhhhhhhhhhhccccccccCCcccc------hHHHHHHHHh Confidence 000000000001111111223333333221 2356778899 Q ss_pred HHhhCCeEEEecccccccccccccccHHHHHHHHhhcccccchhhhccCcCcceEEEecCceeecccccCceeEechHHH Q lcl|Aclame:pro 395 ADDRQDCVAIVNPPAELMVGIPTSTAVKNIVEWRNGMTGSGEVVDNNMNISSTYAFIIGNYKYQYDKYNDINRWVPLAAD 474 (663) Q Consensus 395 ~~~~~~~~~i~d~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~p~~~~~d~~~~~~~~~p~s~~ 474 (663) |++++ +|+++|+|.+ .+.+++++|+++ ++|+|+++||||++++|+.++..+++|||++ T Consensus 148 a~~~~-~~ai~D~p~~--------~t~~~a~~~~~~-------------~~s~~~~~~~p~~~~~d~~~~~~~~~p~s~~ 205 (390) T protein:vir:79 148 AQSLR-AMAYVSASGC--------KTKEEAAAYRRQ-------------FGQREIMVIWPDWLGWDDTTNSTAVIPAPAI 205 (390) T ss_pred hhhcc-eEEEEEccCC--------CCHHHHHHHhcC-------------CCCceEEEEcCceeecccccCceeEeehHHH Confidence 99876 8999998853 356778888754 6789999999999999999999999999999 Q ss_pred HHHHHHhhhhccCceecccceecceeeccee-ee--eecChhhhhhhhhCCceEEEEeeCCCcEEEEcceecCCCCccce Q lcl|Aclame:pro 475 IAGLCAYTDQVSHPWMSPAGYRRGQIRNCIK-LA--IEPKQSMRDTMYQVAINPVTGFAGGDGFVLFGDKMATQVPSPFD 551 (663) Q Consensus 475 ~AG~~a~~d~~~g~~~span~~~~~i~~~~~-~~--~~~~~~~~~~Ln~~~in~i~~~~~~~G~~~wG~rT~~~~~~~~~ 551 (663) +||++||+|.++||||||+|+++.++.++.. +. ......|.+.||++|||++. ++ +||++||+||+++|+ +|+ T Consensus 206 ~Ag~~a~~D~~~g~~~spsN~~i~gi~~~~~~~~~~~~~~~~~a~~Ln~~gi~t~~--~~-~G~~~wG~rT~~~d~-~~~ 281 (390) T protein:vir:79 206 AAGLRAKIDNDIGWHKTISNVVVNGVSGISADVSWDLQDPATDAGYLNEHEVTTLV--NR-NGFRFWGERTCSDDP-KFA 281 (390) T ss_pred HHHHHHhhhccCCcEEccCCceeeccceeeeeccccccccchhhhhhhhcCcEEEE--cC-CCEEEEeccccCCCc-ccc Confidence 9999999999999999999998766655422 12 22345677899999999984 44 799999999998875 799 Q ss_pred eeehhhHHHHHHHHHHHHHHHhhcccCCHHHHHHHHHHHHHHHHHHHhcCceEEEEEEEccCCCCHHHhhCCEEEEEEEE Q lcl|Aclame:pro 552 RINVRRLFNMLKKNIGDTSKYELFENNDAFTRQSFRMETSQYLDGIRSLGGCYDFRVVCDTTNNTPNVIDRNEFVGTIYV 631 (663) Q Consensus 552 ~i~vrR~~~~i~~~~~~~~~~~v~epn~~~~~~~v~~~i~~~L~~l~~~gal~g~~v~~d~~~nt~~~i~~G~~~~~i~~ 631 (663) ||++||+++||+++|+++++|+|||||++.+|++|+++|+.||++||++|+|.||+|+||+++||++||++|+|+++|++ T Consensus 282 ~i~vrR~~~~i~~~i~~~~~~~v~e~~~~~~~~~i~~~i~~~L~~l~~~gal~g~~v~~d~~~nt~~~i~~G~~~~~i~~ 361 (390) T protein:vir:79 282 FENYTRTAQVAADSIAEAQMPVVDGPLNPSLARDIVESINGWFRQQVANGYLIGGSAWIDPEPNTADILASGKAYIDYDY 361 (390) T ss_pred eeeehhhHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeEEEEecCCCCHHHhhCCEEEEEEEE Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred EecCcceEEEEEEEEeecccchhhhhhhhhc Q lcl|Aclame:pro 632 KPPRSINYITLNMVATSTGANFDELIGPMQL 662 (663) Q Consensus 632 ~p~~p~e~i~~~~~~~~~~~~~~e~~~~~~~ 662 (663) +|++|+|||+|++.++... ++++++.|+. T Consensus 362 ~p~~p~e~i~~~~~~~~~~--~~~~~~~v~~ 390 (390) T protein:vir:79 362 TPVPPLENLVLRQRITDRF--LADFPARVAG 390 (390) T ss_pred EecCCcceEEEEEEEchHH--HHHHHHHhcC Confidence 9999999999999988775 6788888887 No 20 >protein:vir:79141 Length: 391 # NCBI annotation: major tail seath protein gpFI # Family: family:all:115 # MgeID: mge:1863 # MgeName: RSA1 # Cross-refs: genbank:acc:YP_001165276;genbank:gi:145708101;genbank:GeneID:5247152 Probab=100.00 E-value=1.3e-95 Score=540.75 Aligned_cols=381 Identities=13% Similarity=0.087 Sum_probs=303.0 Q ss_pred CceecCceEEEEecCCC-cccccCCCceEEEeecc-----cCCCCcceEeCCHHHHHHHcCCcCCCchhHHHHHHHHhcC Q lcl|Aclame:pro 1 MALLSPGIEMKETSINS-TVVRSATGRAAIVGKFA-----WGPAYEVRQVTNEVELVDMFGSPDNVTAPYFMSAMNFLQY 74 (663) Q Consensus 1 ~~~~~PGVyveEv~~~~-~i~~v~Ts~~afvG~~~-----~Gpv~~p~~i~s~~e~~~~FG~~~~~~~~~~~~~~~F~nG 74 (663) |++.+|||||+|++.++ +|.+++|++++|||+++ .+|+|+|++|+|+.||...||. ..++.+++..+|.|| T Consensus 2 ~~~~~pGv~v~e~~~~~~~i~~~~tav~~~vg~a~~a~~~~~p~n~pv~iss~~~~~~~~g~---~gtl~~al~~~~~~g 78 (391) T protein:vir:79 2 PTDYHHGVRVVELNDGTRPIRTIETAVAGIVCTADDADAATFPLDTPVLLTNPQAYIGKAGD---KGTLAHTLDAITDQT 78 (391) T ss_pred CCCCCCCeEEEECCCCcccccccCCceEEEEeecccccccccccccCEEeccHHHHHHhcCC---ccccchhhhhhhccc Confidence 66889999999998665 59999999999999986 6899999999999999999994 667889999999999 Q ss_pred CceEEEEEeccccccccccccccceeeeeccccccccccccccccccccccccceeeeeeecccceeeeeecccchhccc Q lcl|Aclame:pro 75 GNDLRLVRVIDMEKAKNASPLVNQVSVTITTEGQGYTVGDAITVKYNNATITEAGKVTAVDSDGKIKSLFVPTAEIIAKT 154 (663) Q Consensus 75 G~~~~vvRv~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~v~~~~~~g~~~~~~~~~~~~~~~~ 154 (663) |..||+|++......... .. T Consensus 79 g~~~~vv~~~~~~~~~~~---------------------------------~~--------------------------- 98 (391) T protein:vir:79 79 NPLTVVVRVAGGASEAET---------------------------------TS--------------------------- 98 (391) T ss_pred ccceeeeccccccccccc---------------------------------cc--------------------------- Confidence 999999997543210000 00 Q ss_pred ccccccccceeceeeeecccccceeeeeecccccccccccccccccccccccccccccccccccccceeeecchhhcccc Q lcl|Aclame:pro 155 RQLGTYPTLGDNWRIDVSGASGGSAAALALGNIVVDSGVTFGNSEDAPAVMTSPAVMEKYAKFGMPLISAVYPGEIGSTV 234 (663) Q Consensus 155 ~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~g~~g~~v 234 (663) . . .+ .... . T Consensus 99 -~------~-----------~g--------------------~~~~-~-------------------------------- 107 (391) T protein:vir:79 99 -N------L-----------IG--------------------TTNA-A-------------------------------- 107 (391) T ss_pred -c------c-----------cc--------------------cccc-h-------------------------------- Confidence 0 0 00 0000 0 Q ss_pred ccccccccccccccccceecccceecccceeEEEecccccccceeeeccCCcceeeEeeeecccccccccchhhhhhhhc Q lcl|Aclame:pro 235 EVEIVSKTAFNSGAQQTIYPFGGTRTSNARGVIQYGPMTDDQFAIIVRRDGIVVESTVLSTRKGDRDVYGSNIFMDDYFR 314 (663) Q Consensus 235 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (663) T Consensus 108 -------------------------------------------------------------------------------- 107 (391) T protein:vir:79 108 -------------------------------------------------------------------------------- 107 (391) T ss_pred -------------------------------------------------------------------------------- Confidence Q ss_pred CCCceEEEEeecccCCccceeEEecCcccccccccchhhhHHHHHhhhhccccceeEEeeccCcCChhHHHHHHHHHHHH Q lcl|Aclame:pro 315 NGGSNFIFASSEGWPAGFTGIIQLGGGTSANADVGADELIKGWDLFSDREALHVNLMIAGACGSDGAEIASTVQKYVVSL 394 (663) Q Consensus 315 ~~~s~~v~~~~~~~~~~~~~~~~l~gg~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 394 (663) +..+++.++...+....+.+.+++++... ..+++.+++.+ T Consensus 108 ----------------------------------~~~tGl~~l~~~~~~~~~~p~~l~~p~~~------~~~v~~al~~~ 147 (391) T protein:vir:79 108 ----------------------------------GRYTGMKALLTARNRFGVAPRILAVPGLD------SLPVGTELVTI 147 (391) T ss_pred ----------------------------------hhhHHHhhhhhhhhhhcccchhhcCCccc------hhHHHHHHHHH Confidence 00000000000000000011111222111 13467789999 Q ss_pred HHhhCCeEEEecccccccccccccccHHHHHHHHhhcccccchhhhccCcCcceEEEecCceeecccccCceeEechHHH Q lcl|Aclame:pro 395 ADDRQDCVAIVNPPAELMVGIPTSTAVKNIVEWRNGMTGSGEVVDNNMNISSTYAFIIGNYKYQYDKYNDINRWVPLAAD 474 (663) Q Consensus 395 ~~~~~~~~~i~d~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~p~~~~~d~~~~~~~~~p~s~~ 474 (663) |++++ +++++|.|.+ .+.+++++|+++ ++|+|+++||||++++|+.++..+++|||++ T Consensus 148 ~~~~~-~~ai~d~p~~--------~t~~~a~~~~~~-------------~~s~~~a~~~P~~~~~d~~~~~~~~~p~s~~ 205 (391) T protein:vir:79 148 AQKLR-AFAYLSAYGC--------QTKEEAVAYRSN-------------FGQREAMVMWPDFVGWDTAANAETTLWATAR 205 (391) T ss_pred HhhcC-cEEEEECCCC--------CCHHHHHHHHhc-------------cCCceeEEecceeeeecCcCCceeeechHHH Confidence 99987 7899999853 356788888875 5788999999999999999999999999999 Q ss_pred HHHHHHhhhhccCceecccceecceeeccee---eeeecChhhhhhhhhCCceEEEEeeCCCcEEEEcceecCCCCccce Q lcl|Aclame:pro 475 IAGLCAYTDQVSHPWMSPAGYRRGQIRNCIK---LAIEPKQSMRDTMYQVAINPVTGFAGGDGFVLFGDKMATQVPSPFD 551 (663) Q Consensus 475 ~AG~~a~~d~~~g~~~span~~~~~i~~~~~---~~~~~~~~~~~~Ln~~~in~i~~~~~~~G~~~wG~rT~~~~~~~~~ 551 (663) +||+|||+|.++||||||+|+++.++.+... ........|.+.||++|||+++ ++ +||++||+||+++|+ +|| T Consensus 206 ~AG~~a~~D~~~g~~~spaN~~l~gi~~~~~~~~~~~~~~~~~~~~Ln~~~I~t~~--~~-~G~~~wG~rT~~~d~-~~~ 281 (391) T protein:vir:79 206 AVGLRAKIDNDTGWHKTLSNVAVGGVTGLSRDVFWDLQDPATDAGYLNANEVTTLV--HR-DGYRFWGSRTCSADP-LFA 281 (391) T ss_pred HHHHHHHhhhcccceeccCCceehhhhccccccccccccccchhhhhhhcCceEEE--CC-CcEEEEcccccCCCc-ccc Confidence 9999999999999999999998766555321 1223345678899999999984 34 799999999998875 899 Q ss_pred eeehhhHHHHHHHHHHHHHHHhhcccCCHHHHHHHHHHHHHHHHHHHhcCceEEEEEEEccCCCCHHHhhCCEEEEEEEE Q lcl|Aclame:pro 552 RINVRRLFNMLKKNIGDTSKYELFENNDAFTRQSFRMETSQYLDGIRSLGGCYDFRVVCDTTNNTPNVIDRNEFVGTIYV 631 (663) Q Consensus 552 ~i~vrR~~~~i~~~~~~~~~~~v~epn~~~~~~~v~~~i~~~L~~l~~~gal~g~~v~~d~~~nt~~~i~~G~~~~~i~~ 631 (663) ||++||+++||+++|+++++|+|||||++.+|++|+++|++||++||++|+|.||+|+||+++||+++|++|+|+++|++ T Consensus 282 ~i~~rR~~~~i~~~i~~~~~~~v~epn~~~~~~~i~~~i~~~l~~l~~~g~l~g~~v~~~~~~nt~~~i~~G~~~~~i~~ 361 (391) T protein:vir:79 282 FENYTRTAQVLADTMAEAHMWANDLPMTPTLVRDLLEGINAKLRMLTRNGYLLGGAAWFDADANSKDTLKAGQLAIDYDY 361 (391) T ss_pred eeehhhHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCceeceEEEEecCCCCHHHhhCCEEEEEEEE Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred EecCcceEEEEEEEEeecccchhhhhhhhhcC Q lcl|Aclame:pro 632 KPPRSINYITLNMVATSTGANFDELIGPMQLA 663 (663) Q Consensus 632 ~p~~p~e~i~~~~~~~~~~~~~~e~~~~~~~~ 663 (663) +|++|+|||+|+++++.. .++++++.|++| T Consensus 362 ~p~~p~e~i~~~~~~~~~--~~~~~~~~v~~a 391 (391) T protein:vir:79 362 TPVPPLENLTFRQRITDR--YLMQFAEAVKAA 391 (391) T ss_pred EecCCcceEEEEEEEchH--HHHHHHHHhhcC Confidence 999999999999998887 578999999999 No 21 >protein:vir:6079 Length: 396 # NCBI annotation: gpFI # Family: family:all:115 # MgeID: mge:126 # MgeName: WPhi # Cross-refs: genbank:acc:NP_878220;genbank:gi:33438919;genbank:GeneID:1457754 Probab=100.00 E-value=3e-95 Score=538.78 Aligned_cols=387 Identities=12% Similarity=0.083 Sum_probs=307.7 Q ss_pred CceecCceEEEEecCCC-cccccCCCceEEEeecccC-----CCCcceEeCCHHHHHHHcCCcCCCchhHHHHHHHHhcC Q lcl|Aclame:pro 1 MALLSPGIEMKETSINS-TVVRSATGRAAIVGKFAWG-----PAYEVRQVTNEVELVDMFGSPDNVTAPYFMSAMNFLQY 74 (663) Q Consensus 1 ~~~~~PGVyveEv~~~~-~i~~v~Ts~~afvG~~~~G-----pv~~p~~i~s~~e~~~~FG~~~~~~~~~~~~~~~F~nG 74 (663) |+.-+|||||+|++.++ +|.+++|++++|||+++++ |.++|++|+|+.+|+..|| ....+.+++..+|.|| T Consensus 1 m~~~~~Gv~v~e~~~~~~~v~~~~tav~~fvGta~~~~~~~~p~~~p~~v~s~~~~~~~~g---~~~tl~~a~~~~~~~g 77 (396) T protein:vir:60 1 MSDYHHGVQVLEINEGTRVISTVSTAIVGMVCTASDADAEIFPLNKPVLITNVQSAIAKAG---KKGTLAASLQAIADQS 77 (396) T ss_pred CCCCCCCeEEEEcCCCcccccccCceeEEEEecccccccccccCccCeEeechHHHHHhhc---CcchhHHHHHHHhhcc Confidence 99777999999998765 5999999999999998654 8899999999999999999 4667889999999999 Q ss_pred CceEEEEEeccccccccccccccceeeeeccccccccccccccccccccccccceeeeeeecccceeeeeecccchhccc Q lcl|Aclame:pro 75 GNDLRLVRVIDMEKAKNASPLVNQVSVTITTEGQGYTVGDAITVKYNNATITEAGKVTAVDSDGKIKSLFVPTAEIIAKT 154 (663) Q Consensus 75 G~~~~vvRv~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~v~~~~~~g~~~~~~~~~~~~~~~~ 154 (663) |..||++|+......... .. T Consensus 78 g~~~~vv~~~~~~~~~~~---------------------~~--------------------------------------- 97 (396) T protein:vir:60 78 KPVTVVVRVEDGTGEDEE---------------------TK--------------------------------------- 97 (396) T ss_pred CceEEEEecccccccccc---------------------cc--------------------------------------- Confidence 999999997542100000 00 Q ss_pred ccccccccceeceeeeecccccceeeeeecccccccccccccccccccccccccccccccccccccceeeecchhhcccc Q lcl|Aclame:pro 155 RQLGTYPTLGDNWRIDVSGASGGSAAALALGNIVVDSGVTFGNSEDAPAVMTSPAVMEKYAKFGMPLISAVYPGEIGSTV 234 (663) Q Consensus 155 ~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~g~~g~~v 234 (663) .. . ... .+ T Consensus 98 ~~---------------------------~-----------------------------------------~~~----~~ 105 (396) T protein:vir:60 98 LA---------------------------Q-----------------------------------------TVS----NI 105 (396) T ss_pred cc---------------------------c-----------------------------------------ccc----cc Confidence 00 0 000 00 Q ss_pred ccccccccccccccccceecccceecccceeEEEecccccccceeeeccCCcceeeEeeeecccccccccchhhhhhhhc Q lcl|Aclame:pro 235 EVEIVSKTAFNSGAQQTIYPFGGTRTSNARGVIQYGPMTDDQFAIIVRRDGIVVESTVLSTRKGDRDVYGSNIFMDDYFR 314 (663) Q Consensus 235 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (663) ... .. . T Consensus 106 ~~~-~d--------------------------------------------~----------------------------- 111 (396) T protein:vir:60 106 IGT-TD--------------------------------------------E----------------------------- 111 (396) T ss_pred ccc-cc--------------------------------------------c----------------------------- Confidence 000 00 0 Q ss_pred CCCceEEEEeecccCCccceeEEecCcccccccccchhhhHHHHHhhhhccccceeEEeeccCcCChhHHHHHHHHHHHH Q lcl|Aclame:pro 315 NGGSNFIFASSEGWPAGFTGIIQLGGGTSANADVGADELIKGWDLFSDREALHVNLMIAGACGSDGAEIASTVQKYVVSL 394 (663) Q Consensus 315 ~~~s~~v~~~~~~~~~~~~~~~~l~gg~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 394 (663) .+..++..++...+......+.++++++.. ...++++++++ T Consensus 112 ---------------------------------~~~~tg~~al~~~~~~~~~~~~il~ap~~~------~~~v~~al~~~ 152 (396) T protein:vir:60 112 ---------------------------------NGQYTGLKALLAAESVTGVKPRILGVPGLD------TKEVAVALASV 152 (396) T ss_pred ---------------------------------cccccchhhhhhcccceeeeeeeccccccc------cHHHHHHHHHH Confidence 000000111111111112223344444331 24578899999 Q ss_pred HHhhCCeEEEecccccccccccccccHHHHHHHHhhcccccchhhhccCcCcceEEEecCceeecccccCceeEechHHH Q lcl|Aclame:pro 395 ADDRQDCVAIVNPPAELMVGIPTSTAVKNIVEWRNGMTGSGEVVDNNMNISSTYAFIIGNYKYQYDKYNDINRWVPLAAD 474 (663) Q Consensus 395 ~~~~~~~~~i~d~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~p~~~~~d~~~~~~~~~p~s~~ 474 (663) |++++ +++++|.|.+ .+.+++++|+++ ++|.|+++||||++++|+.++..+++|||++ T Consensus 153 ~~~~~-~~~i~d~p~~--------~~~~~a~~~~~~-------------~~s~~~~~~~p~~~~~d~~~~~~~~~p~s~~ 210 (396) T protein:vir:60 153 CQKLR-AFGYISAWGC--------KTISEVKAYRQN-------------FSQRELMVIWPDFLAWDTVASTTATAYATAR 210 (396) T ss_pred hccCC-eEEEEeCCCC--------CCHHHHHHHHhh-------------cCCceEEEEeCceeeecccCCceeEEchhHH Confidence 99887 8999999854 467788999874 5688999999999999999999999999999 Q ss_pred HHHHHHhhhhccCceecccceecceeeccee---eeeecChhhhhhhhhCCceEEEEeeCCCcEEEEcceecCCCCccce Q lcl|Aclame:pro 475 IAGLCAYTDQVSHPWMSPAGYRRGQIRNCIK---LAIEPKQSMRDTMYQVAINPVTGFAGGDGFVLFGDKMATQVPSPFD 551 (663) Q Consensus 475 ~AG~~a~~d~~~g~~~span~~~~~i~~~~~---~~~~~~~~~~~~Ln~~~in~i~~~~~~~G~~~wG~rT~~~~~~~~~ 551 (663) +||++||+|.++|+||||||+++.+|.+... ....+++.|++.||++|||+| |++ +|+++||+||+++|+ +|| T Consensus 211 ~AG~~a~~d~~~g~~~spaN~~l~gi~~~~~~~~~~~~~~~~~~~~Ln~~gI~~~--~~~-~G~~~wG~rT~~~d~-~~~ 286 (396) T protein:vir:60 211 ALGLRAKIDQEQGWHKTLSNVGVNGVTGISASVFWDLQESGTDADLLNESGVTTL--IRR-DGFRFWGNRTCSDDP-LFL 286 (396) T ss_pred HHHHHHHhhhccCcEeCcCCceecceeeceeecccccCCCcchhhhhhhcCcEEE--EcC-CCEEEEcccccCCCc-ccc Confidence 9999999999999999999998776666422 233456789999999999998 454 799999999999875 799 Q ss_pred eeehhhHHHHHHHHHHHHHHHhhcccCCHHHHHHHHHHHHHHHHHHHhcCceEEEEEEEccCCCCHHHhhCCEEEEEEEE Q lcl|Aclame:pro 552 RINVRRLFNMLKKNIGDTSKYELFENNDAFTRQSFRMETSQYLDGIRSLGGCYDFRVVCDTTNNTPNVIDRNEFVGTIYV 631 (663) Q Consensus 552 ~i~vrR~~~~i~~~~~~~~~~~v~epn~~~~~~~v~~~i~~~L~~l~~~gal~g~~v~~d~~~nt~~~i~~G~~~~~i~~ 631 (663) ||++||+++||+++|+++++|+|||||++.+|++|+.+|++||++||++|+|.||+|+||+++||+++|++|+|+++|++ T Consensus 287 ~i~~rR~~~~i~~~i~~~~~~~v~e~n~~~~~~~i~~~i~~~l~~l~~~gal~g~~~~~d~~~nt~~~i~~G~~~~~i~~ 366 (396) T protein:vir:60 287 FENYTRTAQVLADTMAEAHMWAVDKPITATLIRDIVDGINAKFRELKTNGYIVDATCWFSEESNDAETLKAGKLYIDYDY 366 (396) T ss_pred eeehhhHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCceeceEEEEecCCCCHHHhhCCEEEEEEEE Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred EecCcceEEEEEEEEeecccchhhhhhhhhcC Q lcl|Aclame:pro 632 KPPRSINYITLNMVATSTGANFDELIGPMQLA 663 (663) Q Consensus 632 ~p~~p~e~i~~~~~~~~~~~~~~e~~~~~~~~ 663 (663) +|++|+|||+|+++++.. .++++++.|+.= T Consensus 367 ~p~~pae~I~~~~~~~~~--~~~~~~~~~~~~ 396 (396) T protein:vir:60 367 TPVPPLENLTLRQRITDK--YLANLVTSVNSN 396 (396) T ss_pred EecCCcceEEEEEEEchH--HHHHHHHHhhcC Confidence 999999999999999887 466777777655 No 22 >protein:vir:103993 Length: 390 # NCBI annotation: phage tail sheath protein # Family: family:all:115 # MgeID: mge:1665 # MgeName: phi52237 # Cross-refs: genbank:acc:YP_293729;genbank:gi:72537699;genbank:GeneID:3608123 Probab=100.00 E-value=2.9e-95 Score=538.90 Aligned_cols=380 Identities=13% Similarity=0.098 Sum_probs=303.3 Q ss_pred CceecCceEEEEecCCC-cccccCCCceEEEeecccC-----CCCcceEeCCHHHHHHHcCCcCCCchhHHHHHHHHhcC Q lcl|Aclame:pro 1 MALLSPGIEMKETSINS-TVVRSATGRAAIVGKFAWG-----PAYEVRQVTNEVELVDMFGSPDNVTAPYFMSAMNFLQY 74 (663) Q Consensus 1 ~~~~~PGVyveEv~~~~-~i~~v~Ts~~afvG~~~~G-----pv~~p~~i~s~~e~~~~FG~~~~~~~~~~~~~~~F~nG 74 (663) |+|.+|||||+|++.++ +|..+.|++++|||+++++ |+|+|++|+|+.+|...||. ..++++++..+|.|| T Consensus 2 ~~~~~~Gv~v~e~~~g~~~i~~~~tav~g~vg~a~~ad~~~~pln~pv~i~s~~~~~~~~g~---~gtL~~al~~~~~~g 78 (390) T protein:vir:10 2 PQDYHHGVRVIEINEGGRPIRSVSTAVLGVVCTAADADASAFPLNTPVLLTNVVAALGKAGK---KGTLRRTLDAIGKQT 78 (390) T ss_pred cccccCCeEEEEcCCCcccccccCcceeEEEEcccCcCccccccccceEeccHHHHHhhcCC---Cceehhhhhhhcccc Confidence 55889999999998765 5999999999999999876 99999999999999999994 678899999999999 Q ss_pred CceEEEEEeccccccccccccccceeeeeccccccccccccccccccccccccceeeeeeecccceeeeeecccchhccc Q lcl|Aclame:pro 75 GNDLRLVRVIDMEKAKNASPLVNQVSVTITTEGQGYTVGDAITVKYNNATITEAGKVTAVDSDGKIKSLFVPTAEIIAKT 154 (663) Q Consensus 75 G~~~~vvRv~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~v~~~~~~g~~~~~~~~~~~~~~~~ 154 (663) |..||+||+........+.. + .+ . T Consensus 79 g~~~~vv~v~~~~~~~~~~~-------------------~---------------~i--------------------g-- 102 (390) T protein:vir:10 79 KPLTVVVRVAEGKDADETTS-------------------N---------------VI--------------------G-- 102 (390) T ss_pred CceEEEEEeccccccccccc-------------------c---------------cc--------------------c-- Confidence 99999999854321100000 0 00 0 Q ss_pred ccccccccceeceeeeecccccceeeeeecccccccccccccccccccccccccccccccccccccceeeecchhhcccc Q lcl|Aclame:pro 155 RQLGTYPTLGDNWRIDVSGASGGSAAALALGNIVVDSGVTFGNSEDAPAVMTSPAVMEKYAKFGMPLISAVYPGEIGSTV 234 (663) Q Consensus 155 ~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~g~~g~~v 234 (663) . . . .... ..+ T Consensus 103 ----------~-~----~-~~~~------------------------------------------------~tg------ 112 (390) T protein:vir:10 103 ----------T-V----T-PDGK------------------------------------------------YTG------ 112 (390) T ss_pred ----------c-c----c-cccc------------------------------------------------cch------ Confidence 0 0 0 0000 000 Q ss_pred ccccccccccccccccceecccceecccceeEEEecccccccceeeeccCCcceeeEeeeecccccccccchhhhhhhhc Q lcl|Aclame:pro 235 EVEIVSKTAFNSGAQQTIYPFGGTRTSNARGVIQYGPMTDDQFAIIVRRDGIVVESTVLSTRKGDRDVYGSNIFMDDYFR 314 (663) Q Consensus 235 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (663) T Consensus 113 -------------------------------------------------------------------------------- 112 (390) T protein:vir:10 113 -------------------------------------------------------------------------------- 112 (390) T ss_pred -------------------------------------------------------------------------------- Confidence Q ss_pred CCCceEEEEeecccCCccceeEEecCcccccccccchhhhHHHHHhhhhccccceeEEeeccCcCChhHHHHHHHHHHHH Q lcl|Aclame:pro 315 NGGSNFIFASSEGWPAGFTGIIQLGGGTSANADVGADELIKGWDLFSDREALHVNLMIAGACGSDGAEIASTVQKYVVSL 394 (663) Q Consensus 315 ~~~s~~v~~~~~~~~~~~~~~~~l~gg~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 394 (663) ..++...+......+.+++++... ..+++.+|+.+ T Consensus 113 ---------------------------------------~~al~~~~~~~~~~p~il~ap~~~------~~~v~~~l~~~ 147 (390) T protein:vir:10 113 ---------------------------------------IKALLAAQGALGVKPRILAAPGLD------TQPVAAALAAT 147 (390) T ss_pred ---------------------------------------hhhhhhhhhhhcceehhhcccccc------hHHHHHHHHHh Confidence 000000000000011111222211 12367788999 Q ss_pred HHhhCCeEEEecccccccccccccccHHHHHHHHhhcccccchhhhccCcCcceEEEecCceeecccccCceeEechHHH Q lcl|Aclame:pro 395 ADDRQDCVAIVNPPAELMVGIPTSTAVKNIVEWRNGMTGSGEVVDNNMNISSTYAFIIGNYKYQYDKYNDINRWVPLAAD 474 (663) Q Consensus 395 ~~~~~~~~~i~d~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~p~~~~~d~~~~~~~~~p~s~~ 474 (663) |++++ +++++|.|.+ .+.+++++|+++ ++|+|+++||||++++|+.++..+++|||++ T Consensus 148 a~~~~-~~aivD~p~~--------~t~~~a~~~~~~-------------~~s~~~~~~~p~~~~~d~~~~~~~~~p~s~~ 205 (390) T protein:vir:10 148 AQSLR-AMAYVSASGC--------KTKEEAAAYRKQ-------------FGQREIMVIWPDWLGWDDTTNSTAVIPAPAI 205 (390) T ss_pred hcccc-eEEEEecCCC--------CCHHHHHHHhhc-------------cCCceEEEEcCceEeecccCCcccccchHHH Confidence 99887 7999998853 456788888864 6789999999999999999999999999999 Q ss_pred HHHHHHhhhhccCceecccceecceeeccee-ee--eecChhhhhhhhhCCceEEEEeeCCCcEEEEcceecCCCCccce Q lcl|Aclame:pro 475 IAGLCAYTDQVSHPWMSPAGYRRGQIRNCIK-LA--IEPKQSMRDTMYQVAINPVTGFAGGDGFVLFGDKMATQVPSPFD 551 (663) Q Consensus 475 ~AG~~a~~d~~~g~~~span~~~~~i~~~~~-~~--~~~~~~~~~~Ln~~~in~i~~~~~~~G~~~wG~rT~~~~~~~~~ 551 (663) +||++||+|.++||||||+|+.+.++.++.. +. ......|.+.||++|||++. ++ +||++||+||+++|+ +|| T Consensus 206 ~Agl~a~~D~~~g~~~spaN~~l~gi~~~~~~~~~~~~~~~~~~~~ln~~gi~t~~--~~-~G~~~wG~rT~s~d~-~~~ 281 (390) T protein:vir:10 206 AAGLRAKIDNDIGWHKTISNVVVNGVSGISADVSWDLQDPATDAGYLNEHEVTTLV--NR-NGFRFWGERTCSDDP-KFA 281 (390) T ss_pred HHHHHHHhhcCCCcEECcCCceeeceeecceecccccccccchhhhhhhcCcEEEE--cC-CCEEEEcccccCCCc-ccc Confidence 9999999999999999999998776766421 22 33345677899999999884 44 799999999998875 899 Q ss_pred eeehhhHHHHHHHHHHHHHHHhhcccCCHHHHHHHHHHHHHHHHHHHhcCceEEEEEEEccCCCCHHHhhCCEEEEEEEE Q lcl|Aclame:pro 552 RINVRRLFNMLKKNIGDTSKYELFENNDAFTRQSFRMETSQYLDGIRSLGGCYDFRVVCDTTNNTPNVIDRNEFVGTIYV 631 (663) Q Consensus 552 ~i~vrR~~~~i~~~~~~~~~~~v~epn~~~~~~~v~~~i~~~L~~l~~~gal~g~~v~~d~~~nt~~~i~~G~~~~~i~~ 631 (663) ||++||+++||+++|+++++|+|||||++.+|++|+++|++||++||++|+|.||+|+||+++||++||++|+|+++|++ T Consensus 282 ~i~~rR~~~~i~~~i~~~~~~~v~e~n~~~~~~~i~~~i~~~L~~l~~~g~l~g~~v~~d~~~nt~~~i~~G~~~~~v~~ 361 (390) T protein:vir:10 282 FENYTRTAQVAGDSIAEAQMPVVDGPLNPSLARDIVESINGWFRQQVANGYLIGGSAWIDPEPNTADILASGKAYIDYDY 361 (390) T ss_pred eeehhhHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeEEEEccCCCCHHHhhCCeEEEEEEE Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred EecCcceEEEEEEEEeecccchhhhhhhhhc Q lcl|Aclame:pro 632 KPPRSINYITLNMVATSTGANFDELIGPMQL 662 (663) Q Consensus 632 ~p~~p~e~i~~~~~~~~~~~~~~e~~~~~~~ 662 (663) +|++|+|||+|+++++.. .+++++++|+. T Consensus 362 ~p~~pae~I~~~~~~~~~--~~~~~~~~~~~ 390 (390) T protein:vir:10 362 TPVPPLENLVLRQRITDR--FLADFPARVAG 390 (390) T ss_pred EecCCcceEEEEEEEchH--HHHHHHHHhcC Confidence 999999999999998877 48999999998 No 23 >protein:vir:78206 Length: 390 # NCBI annotation: gp33, phage tail sheath protein # Family: family:all:115 # MgeID: mge:1848 # MgeName: phiE12-2 # Cross-refs: genbank:acc:YP_001111183;genbank:gi:134288694;genbank:GeneID:4960666 Probab=100.00 E-value=2.9e-95 Score=538.90 Aligned_cols=380 Identities=13% Similarity=0.098 Sum_probs=303.3 Q ss_pred CceecCceEEEEecCCC-cccccCCCceEEEeecccC-----CCCcceEeCCHHHHHHHcCCcCCCchhHHHHHHHHhcC Q lcl|Aclame:pro 1 MALLSPGIEMKETSINS-TVVRSATGRAAIVGKFAWG-----PAYEVRQVTNEVELVDMFGSPDNVTAPYFMSAMNFLQY 74 (663) Q Consensus 1 ~~~~~PGVyveEv~~~~-~i~~v~Ts~~afvG~~~~G-----pv~~p~~i~s~~e~~~~FG~~~~~~~~~~~~~~~F~nG 74 (663) |+|.+|||||+|++.++ +|..+.|++++|||+++++ |+|+|++|+|+.+|...||. ..++++++..+|.|| T Consensus 2 ~~~~~~Gv~v~e~~~g~~~i~~~~tav~g~vg~a~~ad~~~~pln~pv~i~s~~~~~~~~g~---~gtL~~al~~~~~~g 78 (390) T protein:vir:78 2 PQDYHHGVRVIEINEGGRPIRSVSTAVLGVVCTAADADASAFPLNTPVLLTNVVAALGKAGK---KGTLRRTLDAIGKQT 78 (390) T ss_pred cccccCCeEEEEcCCCcccccccCcceeEEEEcccCcCccccccccceEeccHHHHHhhcCC---Cceehhhhhhhcccc Confidence 55889999999998765 5999999999999999876 99999999999999999994 678899999999999 Q ss_pred CceEEEEEeccccccccccccccceeeeeccccccccccccccccccccccccceeeeeeecccceeeeeecccchhccc Q lcl|Aclame:pro 75 GNDLRLVRVIDMEKAKNASPLVNQVSVTITTEGQGYTVGDAITVKYNNATITEAGKVTAVDSDGKIKSLFVPTAEIIAKT 154 (663) Q Consensus 75 G~~~~vvRv~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~v~~~~~~g~~~~~~~~~~~~~~~~ 154 (663) |..||+||+........+.. + .+ . T Consensus 79 g~~~~vv~v~~~~~~~~~~~-------------------~---------------~i--------------------g-- 102 (390) T protein:vir:78 79 KPLTVVVRVAEGKDADETTS-------------------N---------------VI--------------------G-- 102 (390) T ss_pred CceEEEEEeccccccccccc-------------------c---------------cc--------------------c-- Confidence 99999999854321100000 0 00 0 Q ss_pred ccccccccceeceeeeecccccceeeeeecccccccccccccccccccccccccccccccccccccceeeecchhhcccc Q lcl|Aclame:pro 155 RQLGTYPTLGDNWRIDVSGASGGSAAALALGNIVVDSGVTFGNSEDAPAVMTSPAVMEKYAKFGMPLISAVYPGEIGSTV 234 (663) Q Consensus 155 ~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~g~~g~~v 234 (663) . . . .... ..+ T Consensus 103 ----------~-~----~-~~~~------------------------------------------------~tg------ 112 (390) T protein:vir:78 103 ----------T-V----T-PDGK------------------------------------------------YTG------ 112 (390) T ss_pred ----------c-c----c-cccc------------------------------------------------cch------ Confidence 0 0 0 0000 000 Q ss_pred ccccccccccccccccceecccceecccceeEEEecccccccceeeeccCCcceeeEeeeecccccccccchhhhhhhhc Q lcl|Aclame:pro 235 EVEIVSKTAFNSGAQQTIYPFGGTRTSNARGVIQYGPMTDDQFAIIVRRDGIVVESTVLSTRKGDRDVYGSNIFMDDYFR 314 (663) Q Consensus 235 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (663) T Consensus 113 -------------------------------------------------------------------------------- 112 (390) T protein:vir:78 113 -------------------------------------------------------------------------------- 112 (390) T ss_pred -------------------------------------------------------------------------------- Confidence Q ss_pred CCCceEEEEeecccCCccceeEEecCcccccccccchhhhHHHHHhhhhccccceeEEeeccCcCChhHHHHHHHHHHHH Q lcl|Aclame:pro 315 NGGSNFIFASSEGWPAGFTGIIQLGGGTSANADVGADELIKGWDLFSDREALHVNLMIAGACGSDGAEIASTVQKYVVSL 394 (663) Q Consensus 315 ~~~s~~v~~~~~~~~~~~~~~~~l~gg~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 394 (663) ..++...+......+.+++++... ..+++.+|+.+ T Consensus 113 ---------------------------------------~~al~~~~~~~~~~p~il~ap~~~------~~~v~~~l~~~ 147 (390) T protein:vir:78 113 ---------------------------------------IKALLAAQGALGVKPRILAAPGLD------TQPVAAALAAT 147 (390) T ss_pred ---------------------------------------hhhhhhhhhhhcceehhhcccccc------hHHHHHHHHHh Confidence 000000000000011111222211 12367788999 Q ss_pred HHhhCCeEEEecccccccccccccccHHHHHHHHhhcccccchhhhccCcCcceEEEecCceeecccccCceeEechHHH Q lcl|Aclame:pro 395 ADDRQDCVAIVNPPAELMVGIPTSTAVKNIVEWRNGMTGSGEVVDNNMNISSTYAFIIGNYKYQYDKYNDINRWVPLAAD 474 (663) Q Consensus 395 ~~~~~~~~~i~d~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~p~~~~~d~~~~~~~~~p~s~~ 474 (663) |++++ +++++|.|.+ .+.+++++|+++ ++|+|+++||||++++|+.++..+++|||++ T Consensus 148 a~~~~-~~aivD~p~~--------~t~~~a~~~~~~-------------~~s~~~~~~~p~~~~~d~~~~~~~~~p~s~~ 205 (390) T protein:vir:78 148 AQSLR-AMAYVSASGC--------KTKEEAAAYRKQ-------------FGQREIMVIWPDWLGWDDTTNSTAVIPAPAI 205 (390) T ss_pred hcccc-eEEEEecCCC--------CCHHHHHHHhhc-------------cCCceEEEEcCceEeecccCCcccccchHHH Confidence 99887 7999998853 456788888864 6789999999999999999999999999999 Q ss_pred HHHHHHhhhhccCceecccceecceeeccee-ee--eecChhhhhhhhhCCceEEEEeeCCCcEEEEcceecCCCCccce Q lcl|Aclame:pro 475 IAGLCAYTDQVSHPWMSPAGYRRGQIRNCIK-LA--IEPKQSMRDTMYQVAINPVTGFAGGDGFVLFGDKMATQVPSPFD 551 (663) Q Consensus 475 ~AG~~a~~d~~~g~~~span~~~~~i~~~~~-~~--~~~~~~~~~~Ln~~~in~i~~~~~~~G~~~wG~rT~~~~~~~~~ 551 (663) +||++||+|.++||||||+|+.+.++.++.. +. ......|.+.||++|||++. ++ +||++||+||+++|+ +|| T Consensus 206 ~Agl~a~~D~~~g~~~spaN~~l~gi~~~~~~~~~~~~~~~~~~~~ln~~gi~t~~--~~-~G~~~wG~rT~s~d~-~~~ 281 (390) T protein:vir:78 206 AAGLRAKIDNDIGWHKTISNVVVNGVSGISADVSWDLQDPATDAGYLNEHEVTTLV--NR-NGFRFWGERTCSDDP-KFA 281 (390) T ss_pred HHHHHHHhhcCCCcEECcCCceeeceeecceecccccccccchhhhhhhcCcEEEE--cC-CCEEEEcccccCCCc-ccc Confidence 9999999999999999999998776766421 22 33345677899999999884 44 799999999998875 899 Q ss_pred eeehhhHHHHHHHHHHHHHHHhhcccCCHHHHHHHHHHHHHHHHHHHhcCceEEEEEEEccCCCCHHHhhCCEEEEEEEE Q lcl|Aclame:pro 552 RINVRRLFNMLKKNIGDTSKYELFENNDAFTRQSFRMETSQYLDGIRSLGGCYDFRVVCDTTNNTPNVIDRNEFVGTIYV 631 (663) Q Consensus 552 ~i~vrR~~~~i~~~~~~~~~~~v~epn~~~~~~~v~~~i~~~L~~l~~~gal~g~~v~~d~~~nt~~~i~~G~~~~~i~~ 631 (663) ||++||+++||+++|+++++|+|||||++.+|++|+++|++||++||++|+|.||+|+||+++||++||++|+|+++|++ T Consensus 282 ~i~~rR~~~~i~~~i~~~~~~~v~e~n~~~~~~~i~~~i~~~L~~l~~~g~l~g~~v~~d~~~nt~~~i~~G~~~~~v~~ 361 (390) T protein:vir:78 282 FENYTRTAQVAGDSIAEAQMPVVDGPLNPSLARDIVESINGWFRQQVANGYLIGGSAWIDPEPNTADILASGKAYIDYDY 361 (390) T ss_pred eeehhhHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeEEEEccCCCCHHHhhCCeEEEEEEE Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred EecCcceEEEEEEEEeecccchhhhhhhhhc Q lcl|Aclame:pro 632 KPPRSINYITLNMVATSTGANFDELIGPMQL 662 (663) Q Consensus 632 ~p~~p~e~i~~~~~~~~~~~~~~e~~~~~~~ 662 (663) +|++|+|||+|+++++.. .+++++++|+. T Consensus 362 ~p~~pae~I~~~~~~~~~--~~~~~~~~~~~ 390 (390) T protein:vir:78 362 TPVPPLENLVLRQRITDR--FLADFPARVAG 390 (390) T ss_pred EecCCcceEEEEEEEchH--HHHHHHHHhcC Confidence 999999999999998877 48999999998 No 24 >protein:vir:103168 Length: 641 # NCBI annotation: gp122 # Family: family:all:661 # MgeID: mge:1583 # MgeName: Syn9 # Cross-refs: genbank:acc:YP_717789;genbank:gi:113200626;genbank:GeneID:4239177 Probab=100.00 E-value=3.4e-95 Score=538.51 Aligned_cols=530 Identities=22% Similarity=0.353 Sum_probs=305.8 Q ss_pred Cc-eecCceEEEEecCCCcccccCCCceEEEeecccCCCCcceEeCCHHHHHHHcCCcCCCchhHHHHHHHHhcCCceEE Q lcl|Aclame:pro 1 MA-LLSPGIEMKETSINSTVVRSATGRAAIVGKFAWGPAYEVRQVTNEVELVDMFGSPDNVTAPYFMSAMNFLQYGNDLR 79 (663) Q Consensus 1 ~~-~~~PGVyveEv~~~~~i~~v~Ts~~afvG~~~~Gpv~~p~~i~s~~e~~~~FG~~~~~~~~~~~~~~~F~nGG~~~~ 79 (663) |. |++|||||||+|++.+|++|+||++||||+|+|||+|+|++|+||.||+++||++++.+|++|++++||+|||++|| T Consensus 3 m~~~~sPGVyv~E~~~~~~i~~v~tsvaafvG~~~~GP~~~p~~v~s~~d~~~~FG~~~~~~~l~~av~~fF~ngG~~~~ 82 (641) T protein:vir:10 3 VSNQLSPGVVIQERDLTAVTTPIGLNVGVLAAPFTKGPVEEIFEVSTERDLASVFGEPNDYNYEYWFTASQFLSYGGVLK 82 (641) T ss_pred CccccCCceEEEEecCCCcccccCCccceEEecccCCCCCccEEecCHHHHHHHcCCcCCCcchHHHHHHHHHhcCCEEE Confidence 77 99999999999998889999999999999999999999999999999999999999999999999999999999999 Q ss_pred EEEeccccccccccccccceeeeeccc---cccccccccccccccccccc-cceeeeeeecccceeeeeec--ccchh-- Q lcl|Aclame:pro 80 LVRVIDMEKAKNASPLVNQVSVTITTE---GQGYTVGDAITVKYNNATIT-EAGKVTAVDSDGKIKSLFVP--TAEII-- 151 (663) Q Consensus 80 vvRv~~~~~~~~a~~~~~~~~~~~~~~---~~~~~~~~~i~v~~~~~~~~-~~~~v~~~~~~g~~~~~~~~--~~~~~-- 151 (663) |||+.+.... ++........+..... .......+.+++.+...+.+ ..+++...+........... ..+.. T Consensus 83 vvRv~~~~~~-~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~pG~~gn~l~v~i~~~~~~~~~~~~~~~~~~~~~~ 161 (641) T protein:vir:10 83 AIRLNAASLK-NSVDSGTAPLIKNLQEYETTYESSNSNTFKFASRDAGALGNSVGIFITDAGPDQIAVLPAPGTGNEWEF 161 (641) T ss_pred EEEecCcccc-ccccccchhhccccccccccccCcCccccEEEeccCCCcCCceEEEEEcCCCcceeeeeccccccccee Confidence 9999865422 2221111111110000 00001111122222222221 12222211111000000000 00000 Q ss_pred -----cccccc-----ccccc---c---------eeceeeeecccccceeee-----eecccccccccccccccc----c Q lcl|Aclame:pro 152 -----AKTRQL-----GTYPT---L---------GDNWRIDVSGASGGSAAA-----LALGNIVVDSGVTFGNSE----D 200 (663) Q Consensus 152 -----~~~~~~-----~t~~~---~---------~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~----~ 200 (663) ...... ..... . .................. .....+........+... . T Consensus 162 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~~a~~~~~~~~~~~~a~~~~~~i~~~~~g~~g~~~~~~~~ 241 (641) T protein:vir:10 162 VADEAVTAASGASAKVYRYSIRLTLTNVVGTFVPGGATTISISGSDESVDVLAWDAGNKYLEIALPAGGVTGIFADAQVV 241 (641) T ss_pred ccceeeeeccCcccccccccccccccceeeecccCCcceeEecccccccccccccCCcceeeeeecCCcceeeeeeeeec Confidence 000000 00000 0 000000000000000000 000000000000000000 0 Q ss_pred --ccccccc---cccc--cccccccccceeeecchhhcccccccccccccc-cccccc--ceecccceecccceeEEEec Q lcl|Aclame:pro 201 --APAVMTS---PAVM--EKYAKFGMPLISAVYPGEIGSTVEVEIVSKTAF-NSGAQQ--TIYPFGGTRTSNARGVIQYG 270 (663) Q Consensus 201 --~~~~~~~---~~~~--~~~~~~~~~~~~a~~~g~~g~~v~v~~~~~~~~-~~~~~~--~~~~~~~~~~~~~~~~~~~~ 270 (663) .....+. .... ............+...+..+....+........ ...... ..+....+++.........+ T Consensus 242 t~gt~~~t~a~~g~~~~~~~~~~~~~ia~aat~ag~~g~~~~v~~~~v~d~~~a~~~~~g~~~~~va~~~gts~~a~~~g 321 (641) T protein:vir:10 242 TQGTNTAAIASSGIERRLYIGKDSGSINFAATDAVVDTNATSATISSVRNEYAEREYLPGSKWVNVAARPGTSLYANSVG 321 (641) T ss_pred cCCccceeeecccchhhhhhccccccceeeeecccccccceeeEeeeeeeeecccccccccccccccccchhhhhhhhcC Confidence 0000000 0000 000001111122222333333332222111000 000000 11122233344444445556 Q ss_pred ccccccceeeecc-------CCcceeeEe-eeecccccccccchhhhhhhhcCCCceEEEEeeccc-------------- Q lcl|Aclame:pro 271 PMTDDQFAIIVRR-------DGIVVESTV-LSTRKGDRDVYGSNIFMDDYFRNGGSNFIFASSEGW-------------- 328 (663) Q Consensus 271 ~~~~~~~~~~~~~-------~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~s~~v~~~~~~~-------------- 328 (663) +..++.+.++++. .+++.|.+. ++...+.+...+...++.+.++. .|.++....... T Consensus 322 ~~~D~~~~lv~d~~~~~~g~~g~v~e~~~~~s~~~~~~~~~~~~~~~~~~~~~-~s~~v~~~~~~~~~~~~~~~~~~~~~ 400 (641) T protein:vir:10 322 GVNDELHVLVIDVDGKITGNPGSVLERFIGVSKASDAKTSIGEVNYYKEVIKQ-QSAYVYWGSHETAPFLGTAANAAAGD 400 (641) T ss_pred CcccceEEEEEeecceeeccccceeeeeecccccCCcccccccceeeeeeecc-ccceEEEecccccccccccccccccc Confidence 6667776666544 445667764 56666766666666666666643 344443321100 Q ss_pred -------------------------------CCccceeEEecCcccccc-----cccchhhhHHHHHhhhhccccceeEE Q lcl|Aclame:pro 329 -------------------------------PAGFTGIIQLGGGTSANA-----DVGADELIKGWDLFSDREALHVNLMI 372 (663) Q Consensus 329 -------------------------------~~~~~~~~~l~gg~d~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (663) .........+.+|.|+.. .....+...+++.|++.+++++++++ T Consensus 401 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gG~d~~~~~~~~~~~~~~~~tg~~~~~~~e~~~i~~l~ 480 (641) T protein:vir:10 401 WGASALNRRYNLLRSTAGTTSFPAGAVTVGSKNNATHYYRLANGADYSASGALYNLSNVDIATAYELIEDPESQVIDYVL 480 (641) T ss_pred cccccccccccccccccccccccccccccCCCCcceeEEEeecCcccccccccccccchhHHHHHHHhhhhhhhccceee Confidence 000112345777776543 23445667889999999999998888 Q ss_pred eeccCcCChhHHHHHHHHHHHHHHhhCCeEEEecccccccccccc-cccHHHHHHHHhhcccccchhhhccCcCcceEEE Q lcl|Aclame:pro 373 AGACGSDGAEIASTVQKYVVSLADDRQDCVAIVNPPAELMVGIPT-STAVKNIVEWRNGMTGSGEVVDNNMNISSTYAFI 451 (663) Q Consensus 373 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~d~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ 451 (663) +++... +.....+++++|++|||+|||||+|+|+|.+....... ....+++++|+.. +++|+|+++ T Consensus 481 ~~~~~~-~~~~~~~v~~~~i~~ce~~~d~~ailD~p~~~~~~~~~~~~~~~~~~~~~~~------------~~~s~yaa~ 547 (641) T protein:vir:10 481 SGPAGA-DEAAAIAKATTITTIVESRKDCMAFLSPLRSDVIGVSNTTTVTENLVNYFNQ------------LPSSNYVVF 547 (641) T ss_pred ecCCCC-CcchhHHHHHHHHHHHHhcCCEEEEEcCCcccccCCCchhhHHHHHHHHHhh------------cCCCceEEE Confidence 887654 44556788999999999999999999999887665443 3456788889863 478999999 Q ss_pred ecCceeecccccCceeEechHHHHHHHHHhhhhccCceecccceecceeecceeeeeecChhhhhhhhhCCceEEEEeeC Q lcl|Aclame:pro 452 IGNYKYQYDKYNDINRWVPLAADIAGLCAYTDQVSHPWMSPAGYRRGQIRNCIKLAIEPKQSMRDTMYQVAINPVTGFAG 531 (663) Q Consensus 452 ~~p~~~~~d~~~~~~~~~p~s~~~AG~~a~~d~~~g~~~span~~~~~i~~~~~~~~~~~~~~~~~Ln~~~in~i~~~~~ 531 (663) ||||++++||.+++.+++||||+|||+|||+|.+|||||||||++++.|+|++++++.+++.||+.||++||||||+||+ T Consensus 548 y~P~~~v~dp~~~~~~~vPpsG~iAGv~ArtD~~rGvwkAPAn~~~~~i~gv~~l~~~~~~~e~~~Lnp~gIN~ir~fpg 627 (641) T protein:vir:10 548 DSGYKYIYDKYNDVYRYVPCNGDIAGLILETGLEEEPWFSPAGFQRGVLRNAVKLAYSPNKTQRDRLYANRINPVVSFPG 627 (641) T ss_pred EeceeEeecccCCceeEecCCHHHHHHHHhhhccCCceECcCCcccceeeeeeeeeEecChhHHhhhhhcccceEEecCC Confidence 99999999999999999999999999999999999999999999998999999999999999999999999999999997 Q ss_pred CCcEEEEcceecCCCCccc Q lcl|Aclame:pro 532 GDGFVLFGDKMATQVPSPF 550 (663) Q Consensus 532 ~~G~~~wG~rT~~~~~~~~ 550 (663) +|++- +.-.-.. +. T Consensus 628 -~G~v~--~~~~~~~--~~ 641 (641) T protein:vir:10 628 -HAMIN--NNIAFHT--KL 641 (641) T ss_pred -ceeec--ceeeeee--cC Confidence 78752 1110000 00 No 25 >protein:vir:98553 Length: 395 # NCBI annotation: gp21 # Family: family:all:115 # MgeID: mge:1533 # MgeName: PSP3 # Cross-refs: genbank:acc:NP_958076;genbank:gi:41057373;genbank:GeneID:2744224 Probab=100.00 E-value=1.3e-94 Score=535.25 Aligned_cols=386 Identities=15% Similarity=0.110 Sum_probs=311.2 Q ss_pred CceecCceEEEEecCCC-cccccCCCceEEEeecccC-----CCCcceEeCCHHHHHHHcCCcCCCchhHHHHHHHHhcC Q lcl|Aclame:pro 1 MALLSPGIEMKETSINS-TVVRSATGRAAIVGKFAWG-----PAYEVRQVTNEVELVDMFGSPDNVTAPYFMSAMNFLQY 74 (663) Q Consensus 1 ~~~~~PGVyveEv~~~~-~i~~v~Ts~~afvG~~~~G-----pv~~p~~i~s~~e~~~~FG~~~~~~~~~~~~~~~F~nG 74 (663) |+.-+|||||+|++.++ ++.+++|++++|||+++.+ |+++|++|+|+.||+..||. ..++..++..+|.|| T Consensus 1 m~~~~~GV~v~e~~~g~~~v~~v~tav~~~vgta~~~~~~~~p~~~pv~v~s~~~~~~~~g~---~~tl~~al~~~~~~~ 77 (395) T protein:vir:98 1 MSDFHHGTQVIEINDGTRVISTVATAVVGMVCTASDADATLFPLNEPVLITNVQSAIAKAGK---KGTLAASLQAIADQS 77 (395) T ss_pred CCCCCCCeEEEEcCCCcccccccCcceEEEEeeccCCCccccccccceEeechHHhHhhccc---ccchhhHHHHHhhcc Confidence 99778999999999776 5899999999999999865 88999999999999999994 567889999999999 Q ss_pred CceEEEEEeccccccccccccccceeeeeccccccccccccccccccccccccceeeeeeecccceeeeeecccchhccc Q lcl|Aclame:pro 75 GNDLRLVRVIDMEKAKNASPLVNQVSVTITTEGQGYTVGDAITVKYNNATITEAGKVTAVDSDGKIKSLFVPTAEIIAKT 154 (663) Q Consensus 75 G~~~~vvRv~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~v~~~~~~g~~~~~~~~~~~~~~~~ 154 (663) |+.|+++|+..+....... . T Consensus 78 ~~~~~vv~~~~~~~~~~~~------------------------------~------------------------------ 97 (395) T protein:vir:98 78 KPVTVVVRVEDGTGDDEEA------------------------------A------------------------------ 97 (395) T ss_pred CceEEEeeccccccccccc------------------------------c------------------------------ Confidence 9999999875432100000 0 Q ss_pred ccccccccceeceeeeecccccceeeeeecccccccccccccccccccccccccccccccccccccceeeecchhhcccc Q lcl|Aclame:pro 155 RQLGTYPTLGDNWRIDVSGASGGSAAALALGNIVVDSGVTFGNSEDAPAVMTSPAVMEKYAKFGMPLISAVYPGEIGSTV 234 (663) Q Consensus 155 ~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~g~~g~~v 234 (663) .. . ... T Consensus 98 ~a------------------------------------------------~--------------------~~~------ 103 (395) T protein:vir:98 98 LA------------------------------------------------Q--------------------TVS------ 103 (395) T ss_pred cc------------------------------------------------c--------------------ccc------ Confidence 00 0 000 Q ss_pred ccccccccccccccccceecccceecccceeEEEecccccccceeeeccCCcceeeEeeeecccccccccchhhhhhhhc Q lcl|Aclame:pro 235 EVEIVSKTAFNSGAQQTIYPFGGTRTSNARGVIQYGPMTDDQFAIIVRRDGIVVESTVLSTRKGDRDVYGSNIFMDDYFR 314 (663) Q Consensus 235 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (663) .+ .+ T Consensus 104 ~i-----------------------------------------------~g----------------------------- 107 (395) T protein:vir:98 104 NI-----------------------------------------------IG----------------------------- 107 (395) T ss_pred cc-----------------------------------------------cc----------------------------- Confidence 00 00 Q ss_pred CCCceEEEEeecccCCccceeEEecCcccccccccchhhhHHHHHhhhhccccceeEEeeccCcCChhHHHHHHHHHHHH Q lcl|Aclame:pro 315 NGGSNFIFASSEGWPAGFTGIIQLGGGTSANADVGADELIKGWDLFSDREALHVNLMIAGACGSDGAEIASTVQKYVVSL 394 (663) Q Consensus 315 ~~~s~~v~~~~~~~~~~~~~~~~l~gg~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 394 (663) +. ...+..+++.++........+.+.++++|+... .+++.+|..+ T Consensus 108 --------------------------~~---~~~~~~Tgl~al~~~~~~~~~~p~il~ap~~~~------~~v~~al~~~ 152 (395) T protein:vir:98 108 --------------------------GT---DENGKYTGIKALLTAQAVTGVKPRILGVPGLDT------KEVAVALASA 152 (395) T ss_pred --------------------------cc---ccccchhHHHHHhhhhhhhccchhhcccccccc------cHHHHHHHHH Confidence 00 000001122233333333333445555555432 3367889999 Q ss_pred HHhhCCeEEEecccccccccccccccHHHHHHHHhhcccccchhhhccCcCcceEEEecCceeecccccCceeEechHHH Q lcl|Aclame:pro 395 ADDRQDCVAIVNPPAELMVGIPTSTAVKNIVEWRNGMTGSGEVVDNNMNISSTYAFIIGNYKYQYDKYNDINRWVPLAAD 474 (663) Q Consensus 395 ~~~~~~~~~i~d~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~p~~~~~d~~~~~~~~~p~s~~ 474 (663) |++++ +++++|.|.+ .+.+++++|+++ ++|+|+++||||++++|+.++..+++|||++ T Consensus 153 ~~~~~-~~~~~d~p~~--------~t~~~a~~~~~~-------------~~s~~~~~~~p~~~~~d~~~~~~~~~p~s~~ 210 (395) T protein:vir:98 153 AIKLR-AFAYVSAWGC--------KTISEAMEYRKN-------------FSQRELMVIWPDFLAWDTVKNTTATAYATAR 210 (395) T ss_pred hhhcC-cEEEEEcCCC--------CCHHHHHHHHhc-------------cCCceEEEEecceeEecccCCceeeechHHH Confidence 99887 8999999854 367888999864 5789999999999999999999999999999 Q ss_pred HHHHHHhhhhccCceecccceecceeeccee---eeeecChhhhhhhhhCCceEEEEeeCCCcEEEEcceecCCCCccce Q lcl|Aclame:pro 475 IAGLCAYTDQVSHPWMSPAGYRRGQIRNCIK---LAIEPKQSMRDTMYQVAINPVTGFAGGDGFVLFGDKMATQVPSPFD 551 (663) Q Consensus 475 ~AG~~a~~d~~~g~~~span~~~~~i~~~~~---~~~~~~~~~~~~Ln~~~in~i~~~~~~~G~~~wG~rT~~~~~~~~~ 551 (663) +||++||+|.++||||||+|+++.++.++.. ....++++|++.||++|||+|. ++ +||++||+||+++|+ +|+ T Consensus 211 ~AG~~a~~d~~~g~~~spaN~~i~gi~~~~~~~~~~~~~~~~~~~~Ln~~gI~~~~--~~-~G~~~wG~rT~s~d~-~~~ 286 (395) T protein:vir:98 211 ALGLRAYIDQTVGWHKTLSNVGVQGVTGISASVFWDLQASGTDADLLNEAGVTTLV--RK-DGFRFWGNRTCSDDP-LFL 286 (395) T ss_pred HHHHHHHhhcccCcEeccCCceeecccccceecccccCCCcchHHhhhhcCcEEEE--cC-CCEEEEcccccCCCc-ccc Confidence 9999999999999999999998777766432 2344568899999999999984 44 799999999998775 899 Q ss_pred eeehhhHHHHHHHHHHHHHHHhhcccCCHHHHHHHHHHHHHHHHHHHhcCceEEEEEEEccCCCCHHHhhCCEEEEEEEE Q lcl|Aclame:pro 552 RINVRRLFNMLKKNIGDTSKYELFENNDAFTRQSFRMETSQYLDGIRSLGGCYDFRVVCDTTNNTPNVIDRNEFVGTIYV 631 (663) Q Consensus 552 ~i~vrR~~~~i~~~~~~~~~~~v~epn~~~~~~~v~~~i~~~L~~l~~~gal~g~~v~~d~~~nt~~~i~~G~~~~~i~~ 631 (663) ||++||+++||+++|++.++|+|||||++.+|++|+++|+.||++||++|+|.||+|+||+++||+++|++|+|+++|++ T Consensus 287 ~i~~rR~~~~i~~~i~~~~~~~v~e~~~~~~~~~i~~~i~~~L~~l~~~g~l~g~~v~~d~~~nt~~~i~~G~~~~~i~~ 366 (395) T protein:vir:98 287 FENYTRTAQVLADTMAEAHMWAVDKPITATLIRDIVDGINAKFRELKSNGYIVEGKCWFDEESNDKETLKAGKLYIDYDY 366 (395) T ss_pred eeehhhHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCceeceEEEEecCCCCHHHhhCCeEEEEEEE Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred EecCcceEEEEEEEEeecccchhhhhhhhhc Q lcl|Aclame:pro 632 KPPRSINYITLNMVATSTGANFDELIGPMQL 662 (663) Q Consensus 632 ~p~~p~e~i~~~~~~~~~~~~~~e~~~~~~~ 662 (663) +|++|+|||+|++.++... +++++++|+. T Consensus 367 ~p~~p~e~I~~~~~~~~~~--~~~~~~~~~~ 395 (395) T protein:vir:98 367 TPVPPLESLTLRQRITDKY--LVNLAESVNS 395 (395) T ss_pred EecCCcceEEEEEEEchHH--HHHHHHHhcC Confidence 9999999999999998885 5566666666 No 26 >protein:vir:5711 Length: 396 # NCBI annotation: gpFI # Family: family:all:115 # MgeID: mge:120 # MgeName: L-413C # Cross-refs: genbank:acc:NP_839870;genbank:gi:30065725;genbank:GeneID:1260618 Probab=100.00 E-value=3.8e-94 Score=532.73 Aligned_cols=387 Identities=12% Similarity=0.089 Sum_probs=304.8 Q ss_pred CceecCceEEEEecCCC-cccccCCCceEEEeecccC-----CCCcceEeCCHHHHHHHcCCcCCCchhHHHHHHHHhcC Q lcl|Aclame:pro 1 MALLSPGIEMKETSINS-TVVRSATGRAAIVGKFAWG-----PAYEVRQVTNEVELVDMFGSPDNVTAPYFMSAMNFLQY 74 (663) Q Consensus 1 ~~~~~PGVyveEv~~~~-~i~~v~Ts~~afvG~~~~G-----pv~~p~~i~s~~e~~~~FG~~~~~~~~~~~~~~~F~nG 74 (663) |+.-+|||||+|++.++ +|.++.|++++|||+++++ |+++|++|+|+.||...||. ..++.+++.++|.|| T Consensus 1 m~~~~~GV~v~e~~~g~~~i~~v~tav~~~vg~a~~~d~~~~~~~~pv~i~s~~~~~~~~g~---~~tl~~al~~~~~~~ 77 (396) T protein:vir:57 1 MSDYHHGVQVLEINDGTRVISTVSTAIVGMVCTASDADAETFPLNKPVLITNVQSAIAKAGK---KGTLAASLQAIADQS 77 (396) T ss_pred CCCCCCceEEEEcCCCcccccccCCceEEEEEeccCCCcccccCccCeEeecchhhhhhccc---ccchHHHHHHhhhcC Confidence 99888999999999765 5999999999999999876 88999999999999999984 568889999999999 Q ss_pred CceEEEEEeccccccccccccccceeeeeccccccccccccccccccccccccceeeeeeecccceeeeeecccchhccc Q lcl|Aclame:pro 75 GNDLRLVRVIDMEKAKNASPLVNQVSVTITTEGQGYTVGDAITVKYNNATITEAGKVTAVDSDGKIKSLFVPTAEIIAKT 154 (663) Q Consensus 75 G~~~~vvRv~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~v~~~~~~g~~~~~~~~~~~~~~~~ 154 (663) |..||++|+........... ... T Consensus 78 ~~~~~vv~~~~~~~~~~~~~----------------------------~a~----------------------------- 100 (396) T protein:vir:57 78 KPVTVVVRVEDGTGDDEETK----------------------------LAQ----------------------------- 100 (396) T ss_pred CceeEeeecccccccccccc----------------------------ccc----------------------------- Confidence 99999998754321100000 000 Q ss_pred ccccccccceeceeeeecccccceeeeeecccccccccccccccccccccccccccccccccccccceeeecchhhcccc Q lcl|Aclame:pro 155 RQLGTYPTLGDNWRIDVSGASGGSAAALALGNIVVDSGVTFGNSEDAPAVMTSPAVMEKYAKFGMPLISAVYPGEIGSTV 234 (663) Q Consensus 155 ~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~g~~g~~v 234 (663) .... . .+.. .. . + T Consensus 101 ---------t~~~---i------------iG~~-----------~~-~----------------------------~--- 113 (396) T protein:vir:57 101 ---------TVSN---I------------IGTT-----------DE-N----------------------------G--- 113 (396) T ss_pred ---------ccee---e------------eeec-----------cc-c----------------------------c--- Confidence 0000 0 0000 00 0 0 Q ss_pred ccccccccccccccccceecccceecccceeEEEecccccccceeeeccCCcceeeEeeeecccccccccchhhhhhhhc Q lcl|Aclame:pro 235 EVEIVSKTAFNSGAQQTIYPFGGTRTSNARGVIQYGPMTDDQFAIIVRRDGIVVESTVLSTRKGDRDVYGSNIFMDDYFR 314 (663) Q Consensus 235 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (663) T Consensus 114 -------------------------------------------------------------------------------- 113 (396) T protein:vir:57 114 -------------------------------------------------------------------------------- 113 (396) T ss_pred -------------------------------------------------------------------------------- Confidence Q ss_pred CCCceEEEEeecccCCccceeEEecCcccccccccchhhhHHHHHhhhhccccceeEEeeccCcCChhHHHHHHHHHHHH Q lcl|Aclame:pro 315 NGGSNFIFASSEGWPAGFTGIIQLGGGTSANADVGADELIKGWDLFSDREALHVNLMIAGACGSDGAEIASTVQKYVVSL 394 (663) Q Consensus 315 ~~~s~~v~~~~~~~~~~~~~~~~l~gg~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 394 (663) ..+++.++...+....+.+++++++.. ....++.+|..+ T Consensus 114 -----------------------------------~~tgl~al~~~~~~~~~~p~i~~ap~~------~~~~v~~al~~~ 152 (396) T protein:vir:57 114 -----------------------------------QYTGLKALMGAESVTGVKPRILGVPGL------DTKEVAVALASV 152 (396) T ss_pred -----------------------------------cchhhhhhhhcccceeEEeccccCccc------chhHHHHHHHHH Confidence 000000000001001111222222222 123467889999 Q ss_pred HHhhCCeEEEecccccccccccccccHHHHHHHHhhcccccchhhhccCcCcceEEEecCceeecccccCceeEechHHH Q lcl|Aclame:pro 395 ADDRQDCVAIVNPPAELMVGIPTSTAVKNIVEWRNGMTGSGEVVDNNMNISSTYAFIIGNYKYQYDKYNDINRWVPLAAD 474 (663) Q Consensus 395 ~~~~~~~~~i~d~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~p~~~~~d~~~~~~~~~p~s~~ 474 (663) |++++ +++++|+|.+ .+.+++++|+++ ++|.|+++||||++++|+.++..+++|||++ T Consensus 153 ~~~~~-~~~~~d~p~~--------~~~~~~~~~~~~-------------~~s~~~~~~~p~~~~~d~~~~~~~~~p~s~~ 210 (396) T protein:vir:57 153 CQELN-AFGYISAWGC--------KTISEVKAYRQN-------------FSQRELMVIWPDFLAWDTVTSTTATAYATAR 210 (396) T ss_pred hhhCc-eEEEEcCCCC--------CCHHHHHHHHhc-------------cCCceEEEEcceeeeecccCCceeEEehhHH Confidence 98765 9999999864 356888999874 6789999999999999999999999999999 Q ss_pred HHHHHHhhhhccCceecccceecceeeccee---eeeecChhhhhhhhhCCceEEEEeeCCCcEEEEcceecCCCCccce Q lcl|Aclame:pro 475 IAGLCAYTDQVSHPWMSPAGYRRGQIRNCIK---LAIEPKQSMRDTMYQVAINPVTGFAGGDGFVLFGDKMATQVPSPFD 551 (663) Q Consensus 475 ~AG~~a~~d~~~g~~~span~~~~~i~~~~~---~~~~~~~~~~~~Ln~~~in~i~~~~~~~G~~~wG~rT~~~~~~~~~ 551 (663) +||++||+|.++|+||||+|+++.+|.+... ......+.|++.||++|||+|. ++ +||++||+||+++++ +|+ T Consensus 211 ~Ag~~a~~d~~~g~~~spaN~~l~gi~~~~~~~~~~~~~~~~~~~~Ln~~gi~t~~--~~-~G~~~wG~rT~~~d~-~~~ 286 (396) T protein:vir:57 211 ALGLRAKIDQEQGWHKTLSNVGVNGVTGISASVFWDLQKPGTDADLLNEAGVTTLV--RR-DGFRFWGNRTCSDDP-LFL 286 (396) T ss_pred HHHHHHHhhhccCcEeccCCceeccccccceecccccCCcchhhhhhhhcCcEEEE--cC-CCEEEEcccccCCCc-ccc Confidence 9999999999999999999998777665422 2334467899999999999984 44 799999999998875 799 Q ss_pred eeehhhHHHHHHHHHHHHHHHhhcccCCHHHHHHHHHHHHHHHHHHHhcCceEEEEEEEccCCCCHHHhhCCEEEEEEEE Q lcl|Aclame:pro 552 RINVRRLFNMLKKNIGDTSKYELFENNDAFTRQSFRMETSQYLDGIRSLGGCYDFRVVCDTTNNTPNVIDRNEFVGTIYV 631 (663) Q Consensus 552 ~i~vrR~~~~i~~~~~~~~~~~v~epn~~~~~~~v~~~i~~~L~~l~~~gal~g~~v~~d~~~nt~~~i~~G~~~~~i~~ 631 (663) ||++||+++||+++|++.++|+|||||++.+|++|+++|+.||++||++|+|+||+|+||+++||+++|++|+|+++|++ T Consensus 287 ~i~vrR~~~~i~~~i~~~~~~~v~e~n~~~~~~~i~~~i~~~l~~l~~~gal~g~~v~~d~~~n~~~~i~~G~~~~~v~~ 366 (396) T protein:vir:57 287 FESYTRTAQVLADTMAEAHMWAIDKPITATLIRDIIDGINAKFRELKNNGYIVDGTCWFSEESNDAETLKAGKLYIDYDY 366 (396) T ss_pred eeehhhHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCceeceEEEEecCCCCHHHhhCCeEEEEEEE Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred EecCcceEEEEEEEEeecccchhhhhhhhhcC Q lcl|Aclame:pro 632 KPPRSINYITLNMVATSTGANFDELIGPMQLA 663 (663) Q Consensus 632 ~p~~p~e~i~~~~~~~~~~~~~~e~~~~~~~~ 663 (663) +|++|+|||+|+++++... +++++++|+.= T Consensus 367 ~p~~p~e~I~~~~~~~~~~--~~~~~~~~~~~ 396 (396) T protein:vir:57 367 TPVPPLENLTLRQRITSRY--LASLVTSVNSN 396 (396) T ss_pred EecCCcceEEEEEEEchHH--HHHHHHHhhcC Confidence 9999999999999998874 66666666555 No 27 >protein:vir:2035 Length: 396 # NCBI annotation: gpFI # Family: family:all:115 # MgeID: mge:315 # MgeName: P2 # Cross-refs: genbank:acc:NP_046778;genbank:gi:9630349;genbank:GeneID:1261516 Probab=100.00 E-value=1.5e-94 Score=535.02 Aligned_cols=387 Identities=12% Similarity=0.085 Sum_probs=307.0 Q ss_pred CceecCceEEEEecCCC-cccccCCCceEEEeecccC-----CCCcceEeCCHHHHHHHcCCcCCCchhHHHHHHHHhcC Q lcl|Aclame:pro 1 MALLSPGIEMKETSINS-TVVRSATGRAAIVGKFAWG-----PAYEVRQVTNEVELVDMFGSPDNVTAPYFMSAMNFLQY 74 (663) Q Consensus 1 ~~~~~PGVyveEv~~~~-~i~~v~Ts~~afvG~~~~G-----pv~~p~~i~s~~e~~~~FG~~~~~~~~~~~~~~~F~nG 74 (663) |+.-+|||||+|++.++ ++..+.|++++|||+++++ |+++|++|+|+.+|...||+ ...+++++.+||.|| T Consensus 1 m~~~~~GV~v~e~~~g~~~i~~v~tav~~~vg~a~~a~~~~~~l~~pvlvts~~~~~~~~g~---~~tL~~al~~~~~ng 77 (396) T protein:vir:20 1 MSDYHHGVQVLEINEGTRVISTVSTAIVGMVCTASDADAETFPLNKPVLITNVQSAISKAGK---KGTLAASLQAIADQS 77 (396) T ss_pred CCCCCCCeEEEEcCCCcceeeecCCceeEEEeeeccCCCccccCccCEEeechHHHHhhccc---ccchhhhhhhhhccC Confidence 99667999999999765 5899999999999998764 78999999999999999994 566788999999999 Q ss_pred CceEEEEEeccccccccccccccceeeeeccccccccccccccccccccccccceeeeeeecccceeeeeecccchhccc Q lcl|Aclame:pro 75 GNDLRLVRVIDMEKAKNASPLVNQVSVTITTEGQGYTVGDAITVKYNNATITEAGKVTAVDSDGKIKSLFVPTAEIIAKT 154 (663) Q Consensus 75 G~~~~vvRv~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~v~~~~~~g~~~~~~~~~~~~~~~~ 154 (663) |..||++|+......... . T Consensus 78 g~~~~v~~~~~~~~~~~~------------------------------~------------------------------- 96 (396) T protein:vir:20 78 KPVTVVMRVEDGTGDDEE------------------------------T------------------------------- 96 (396) T ss_pred ceeEEEEecccccccccc------------------------------c------------------------------- Confidence 999999997543110000 0 Q ss_pred ccccccccceeceeeeecccccceeeeeecccccccccccccccccccccccccccccccccccccceeeecchhhcccc Q lcl|Aclame:pro 155 RQLGTYPTLGDNWRIDVSGASGGSAAALALGNIVVDSGVTFGNSEDAPAVMTSPAVMEKYAKFGMPLISAVYPGEIGSTV 234 (663) Q Consensus 155 ~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~g~~g~~v 234 (663) . .. . +.. .+ T Consensus 97 -~----------~a------~------------------------------t~~------------------------~~ 105 (396) T protein:vir:20 97 -K----------LA------Q------------------------------TVS------------------------NI 105 (396) T ss_pred -c----------cc------c------------------------------ccc------------------------cc Confidence 0 00 0 000 00 Q ss_pred ccccccccccccccccceecccceecccceeEEEecccccccceeeeccCCcceeeEeeeecccccccccchhhhhhhhc Q lcl|Aclame:pro 235 EVEIVSKTAFNSGAQQTIYPFGGTRTSNARGVIQYGPMTDDQFAIIVRRDGIVVESTVLSTRKGDRDVYGSNIFMDDYFR 314 (663) Q Consensus 235 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (663) ...... T Consensus 106 ~~~~~~-------------------------------------------------------------------------- 111 (396) T protein:vir:20 106 IGTTDE-------------------------------------------------------------------------- 111 (396) T ss_pred cccccc-------------------------------------------------------------------------- Confidence 000000 Q ss_pred CCCceEEEEeecccCCccceeEEecCcccccccccchhhhHHHHHhhhhccccceeEEeeccCcCChhHHHHHHHHHHHH Q lcl|Aclame:pro 315 NGGSNFIFASSEGWPAGFTGIIQLGGGTSANADVGADELIKGWDLFSDREALHVNLMIAGACGSDGAEIASTVQKYVVSL 394 (663) Q Consensus 315 ~~~s~~v~~~~~~~~~~~~~~~~l~gg~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 394 (663) .+..++..++...+......+.+++++... ...++.+|+++ T Consensus 112 ---------------------------------~~~~tg~~al~~~~~~~~~~p~i~~ap~~~------~~~v~~al~~~ 152 (396) T protein:vir:20 112 ---------------------------------NGQYTGLKAMLAAESVTGVKPRILGVPGLD------TKEVAVALASV 152 (396) T ss_pred ---------------------------------ccccchhhhhhhhccccccchhhhhhhhhc------cHHHHHHHHHH Confidence 000000001111111111122223333321 23467899999 Q ss_pred HHhhCCeEEEecccccccccccccccHHHHHHHHhhcccccchhhhccCcCcceEEEecCceeecccccCceeEechHHH Q lcl|Aclame:pro 395 ADDRQDCVAIVNPPAELMVGIPTSTAVKNIVEWRNGMTGSGEVVDNNMNISSTYAFIIGNYKYQYDKYNDINRWVPLAAD 474 (663) Q Consensus 395 ~~~~~~~~~i~d~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~p~~~~~d~~~~~~~~~p~s~~ 474 (663) |++++ +++++|+|.+ .+.+++++||++ ++|+|+++||||++++|+.++..+++|||++ T Consensus 153 ~~~~~-~~~~iD~p~~--------~~~~~a~~~r~~-------------~~s~~~~~~~P~~~~~d~~~~~~~~~p~s~~ 210 (396) T protein:vir:20 153 CQKLR-AFGYISAWGC--------KTISEVKAYRQN-------------FSQRELMVIWPDFLAWDTVTSTTATAYATAR 210 (396) T ss_pred HhcCC-cEEEEecCCC--------CCHHHHHHHhhC-------------CCCceEEEEcCccccccCcCCcceeechhHH Confidence 99887 7899999864 356888999864 5789999999999999999999999999999 Q ss_pred HHHHHHhhhhccCceecccceecceeeccee---eeeecChhhhhhhhhCCceEEEEeeCCCcEEEEcceecCCCCccce Q lcl|Aclame:pro 475 IAGLCAYTDQVSHPWMSPAGYRRGQIRNCIK---LAIEPKQSMRDTMYQVAINPVTGFAGGDGFVLFGDKMATQVPSPFD 551 (663) Q Consensus 475 ~AG~~a~~d~~~g~~~span~~~~~i~~~~~---~~~~~~~~~~~~Ln~~~in~i~~~~~~~G~~~wG~rT~~~~~~~~~ 551 (663) +||++||+|.++|+||||+|+++.+|.+... ....+++.|++.||++|||++. ++ +||++||+||+++|+ +|+ T Consensus 211 ~Ag~~a~~d~~~g~~~spaN~~l~gi~~~~~~~~~~~~~~~~~~~~Ln~~gi~~~~--~~-~G~~~wG~rT~s~d~-~~~ 286 (396) T protein:vir:20 211 ALGLRAKIDQEQGWHKTLSNVGVNGVTGISASVFWDLQESGTDADLLNESGVTTLI--RR-DGFRFWGNRTCSDDP-LFL 286 (396) T ss_pred HHHHHHHhhhhcCcEeccCCceeccceecceecccccCCCcchhhhhhhcCcEEEE--cC-CCEEEEcccccCCCc-ccc Confidence 9999999999999999999998877766432 2234567899999999999984 44 799999999998875 799 Q ss_pred eeehhhHHHHHHHHHHHHHHHhhcccCCHHHHHHHHHHHHHHHHHHHhcCceEEEEEEEccCCCCHHHhhCCEEEEEEEE Q lcl|Aclame:pro 552 RINVRRLFNMLKKNIGDTSKYELFENNDAFTRQSFRMETSQYLDGIRSLGGCYDFRVVCDTTNNTPNVIDRNEFVGTIYV 631 (663) Q Consensus 552 ~i~vrR~~~~i~~~~~~~~~~~v~epn~~~~~~~v~~~i~~~L~~l~~~gal~g~~v~~d~~~nt~~~i~~G~~~~~i~~ 631 (663) ||++||+++||+++|++.++|+|||||++.+|++|+++|+.||++||++|+|.||+|+||+++||+++|++|+|+++|++ T Consensus 287 ~i~~rR~~~~i~~~~~~~~~~~v~e~~~~~~~~~i~~~i~~~L~~l~~~G~l~g~~v~~d~~~nt~~~i~~G~~~~~i~~ 366 (396) T protein:vir:20 287 FENYTRTAQVVADTMAEAHMWAVDKPITATLIRDIVDGINAKFRELKTNGYIVDATCWFSEESNDAETLKAGKLYIDYDY 366 (396) T ss_pred eeehhhHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCcceeceEEEEecCCCCHHHhhCCEEEEEEEE Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred EecCcceEEEEEEEEeecccchhhhhhhhhcC Q lcl|Aclame:pro 632 KPPRSINYITLNMVATSTGANFDELIGPMQLA 663 (663) Q Consensus 632 ~p~~p~e~i~~~~~~~~~~~~~~e~~~~~~~~ 663 (663) +|++|+|||+|++++... .|++++++|+.= T Consensus 367 ~p~~p~e~i~~~~~~~~~--~~~~~~~~~~~~ 396 (396) T protein:vir:20 367 TPVPPLENLTLRQRITDK--YLANLVTSVNSN 396 (396) T ss_pred EecCCcceEEEEEEEchH--HHHHHHHHhhcC Confidence 999999999999998877 488999998877 No 28 >protein:vir:1172 Length: 391 # NCBI annotation: hypothetical protein # Family: family:all:115 # MgeID: mge:24 # MgeName: phi CTX # Cross-refs: genbank:acc:NP_490621;genbank:gi:17313241;genbank:GeneID:927300 Probab=100.00 E-value=9.4e-94 Score=530.60 Aligned_cols=380 Identities=14% Similarity=0.114 Sum_probs=305.3 Q ss_pred CceecCceEEEEecCCC-cccccCCCceEEEeecc-----cCCCCcceEeCCHHHHHHHcCCcCCCchhHHHHHHHHhcC Q lcl|Aclame:pro 1 MALLSPGIEMKETSINS-TVVRSATGRAAIVGKFA-----WGPAYEVRQVTNEVELVDMFGSPDNVTAPYFMSAMNFLQY 74 (663) Q Consensus 1 ~~~~~PGVyveEv~~~~-~i~~v~Ts~~afvG~~~-----~Gpv~~p~~i~s~~e~~~~FG~~~~~~~~~~~~~~~F~nG 74 (663) |++.+|||||+|++.++ +|..+.|++++|+|+++ .+|+++|++|+|+.+|...|| +..++++++..+|.|| T Consensus 3 ~~~~~~GV~v~e~~~~~~~i~~v~tavig~vg~a~~a~~~~~~~~~p~~v~s~~~~~~~~g---~~~tl~~al~~~~~~~ 79 (391) T protein:vir:11 3 ADQYHHGVRVQEINDGTRPIRTIATAIIGLVATAEDADATAFPLDTPVLITNVQAAIGKAG---TSGTLPASLQAIADQA 79 (391) T ss_pred CCcCCCcEEEEECCCCcceecccCCceeEEEEecCCCCCccccccccEEEecchhhheecC---CCccchhhhhhhhccc Confidence 67999999999999765 59999999999999998 469999999999999999998 4567888999999999 Q ss_pred CceEEEEEeccccccccccccccceeeeeccccccccccccccccccccccccceeeeeeecccceeeeeecccchhccc Q lcl|Aclame:pro 75 GNDLRLVRVIDMEKAKNASPLVNQVSVTITTEGQGYTVGDAITVKYNNATITEAGKVTAVDSDGKIKSLFVPTAEIIAKT 154 (663) Q Consensus 75 G~~~~vvRv~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~v~~~~~~g~~~~~~~~~~~~~~~~ 154 (663) |+.||+||+......+. +. T Consensus 80 g~~~~vv~~~~~~~~~~-------------------t~------------------------------------------ 98 (391) T protein:vir:11 80 NAATVVVRVKPGEDEAA-------------------TN------------------------------------------ 98 (391) T ss_pred cceeEEeeecccccccc-------------------cc------------------------------------------ Confidence 99999999743210000 00 Q ss_pred ccccccccceeceeeeecccccceeeeeecccccccccccccccccccccccccccccccccccccceeeecchhhcccc Q lcl|Aclame:pro 155 RQLGTYPTLGDNWRIDVSGASGGSAAALALGNIVVDSGVTFGNSEDAPAVMTSPAVMEKYAKFGMPLISAVYPGEIGSTV 234 (663) Q Consensus 155 ~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~g~~g~~v 234 (663) ....+ . .... . .. T Consensus 99 -----------------~d~~g--------------------~-~~a~-----------~----------~~-------- 111 (391) T protein:vir:11 99 -----------------SAVIG--------------------G-VSAD-----------G----------KY-------- 111 (391) T ss_pred -----------------hhhhc--------------------c-cccc-----------c----------ch-------- Confidence 00000 0 0000 0 00 Q ss_pred ccccccccccccccccceecccceecccceeEEEecccccccceeeeccCCcceeeEeeeecccccccccchhhhhhhhc Q lcl|Aclame:pro 235 EVEIVSKTAFNSGAQQTIYPFGGTRTSNARGVIQYGPMTDDQFAIIVRRDGIVVESTVLSTRKGDRDVYGSNIFMDDYFR 314 (663) Q Consensus 235 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (663) .+ T Consensus 112 -------------------------------------------------~g----------------------------- 113 (391) T protein:vir:11 112 -------------------------------------------------TG----------------------------- 113 (391) T ss_pred -------------------------------------------------hh----------------------------- Confidence 00 Q ss_pred CCCceEEEEeecccCCccceeEEecCcccccccccchhhhHHHHHhhhhccccceeEEeeccCcCChhHHHHHHHHHHHH Q lcl|Aclame:pro 315 NGGSNFIFASSEGWPAGFTGIIQLGGGTSANADVGADELIKGWDLFSDREALHVNLMIAGACGSDGAEIASTVQKYVVSL 394 (663) Q Consensus 315 ~~~s~~v~~~~~~~~~~~~~~~~l~gg~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 394 (663) ..++..........+.+++++... ..+++.+|+++ T Consensus 114 ---------------------------------------~~a~~~~~~~~~~~p~~~~ap~~~------~~~v~~al~~~ 148 (391) T protein:vir:11 114 ---------------------------------------MKALLAAKARLGVVPRILGVPGLD------TQPVATALIAI 148 (391) T ss_pred ---------------------------------------hhhhhhhhhhheeccccccccccc------cHHHHHHHHHh Confidence 000000000000011122223221 23467899999 Q ss_pred HHhhCCeEEEecccccccccccccccHHHHHHHHhhcccccchhhhccCcCcceEEEecCceeecccccCceeEechHHH Q lcl|Aclame:pro 395 ADDRQDCVAIVNPPAELMVGIPTSTAVKNIVEWRNGMTGSGEVVDNNMNISSTYAFIIGNYKYQYDKYNDINRWVPLAAD 474 (663) Q Consensus 395 ~~~~~~~~~i~d~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~p~~~~~d~~~~~~~~~p~s~~ 474 (663) |++++ +|+++|+|.+ .+.+++++|+++ ++|+|+++||||++++|+.++..+++|||++ T Consensus 149 ~~~~~-~~~i~D~p~~--------~t~~~a~~~r~~-------------~~s~~~~~~~p~~~~~~~~~~~~~~~p~s~~ 206 (391) T protein:vir:11 149 AQQLR-AFAYVSASGC--------KTKEEATAYREN-------------FAAREAMVIWPDFLTWSTVVNQTVPAPAVAQ 206 (391) T ss_pred hcccc-eEEEEEcCCC--------CCHHHHHHHhhh-------------cCCceEEEEcCcceecccccCceEEechHHH Confidence 98875 9999998853 356888889864 6789999999999999999999999999999 Q ss_pred HHHHHHhhhhccCceecccceecceeeccee---eeeecChhhhhhhhhCCceEEEEeeCCCcEEEEcceecCCCCccce Q lcl|Aclame:pro 475 IAGLCAYTDQVSHPWMSPAGYRRGQIRNCIK---LAIEPKQSMRDTMYQVAINPVTGFAGGDGFVLFGDKMATQVPSPFD 551 (663) Q Consensus 475 ~AG~~a~~d~~~g~~~span~~~~~i~~~~~---~~~~~~~~~~~~Ln~~~in~i~~~~~~~G~~~wG~rT~~~~~~~~~ 551 (663) +||++||+|.++||||||||+++.++.++.. .+...++.|++.||++|||+++ ++ +||++||+||+++++ +|+ T Consensus 207 ~ag~~a~~d~~~g~~~span~~l~gi~~~~~~~~~~~~~~~~~~~~Ln~~gi~~~~--~~-~G~~~wG~rT~~~d~-~~~ 282 (391) T protein:vir:11 207 ALGLRARIDQEVGWHKTLSNVAVNGVTGISADVFWDLQSPSTDANYLNENEVTTLV--QE-GGFRFWGSRTCSDDP-LFA 282 (391) T ss_pred HHHHHHHhhccCCcEEccCCceeeceeecccccccccCCCcchhhhhhhcCcEEEE--cC-CCEEEEcccccCCCc-ccc Confidence 9999999999999999999999877766422 2334567899999999999984 44 799999999998875 799 Q ss_pred eeehhhHHHHHHHHHHHHHHHhhcccCCHHHHHHHHHHHHHHHHHHHhcCceEEEEEEEccCCCCHHHhhCCEEEEEEEE Q lcl|Aclame:pro 552 RINVRRLFNMLKKNIGDTSKYELFENNDAFTRQSFRMETSQYLDGIRSLGGCYDFRVVCDTTNNTPNVIDRNEFVGTIYV 631 (663) Q Consensus 552 ~i~vrR~~~~i~~~~~~~~~~~v~epn~~~~~~~v~~~i~~~L~~l~~~gal~g~~v~~d~~~nt~~~i~~G~~~~~i~~ 631 (663) ||++||+++||+++|++.++|+|||||++.+|++|+++|+.||++||++|+|+||+|+||+++||+++|++|+|+++|++ T Consensus 283 ~i~vrR~~~~i~~~~~~~~~~~v~e~n~~~~~~~i~~~i~~~l~~l~~~g~l~g~~~~~~~~~n~~~~i~~G~~~~~i~~ 362 (391) T protein:vir:11 283 FENYTRTAQVLADTIAEAHMWAVDKPMHPSLVRDILEGVNAKFRELKGLGLIIDAQAWYDPNVNDKDTLKAGKLRITYDY 362 (391) T ss_pred eeehhhHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhccceeceEEEEecCCCCHHHhhCCeEEEEEEE Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred EecCcceEEEEEEEEeecccchhhhhhhhhc Q lcl|Aclame:pro 632 KPPRSINYITLNMVATSTGANFDELIGPMQL 662 (663) Q Consensus 632 ~p~~p~e~i~~~~~~~~~~~~~~e~~~~~~~ 662 (663) +|++|+|||+|++.++... |+|+++.|+. T Consensus 363 ~p~~p~e~i~~~~~~~~~~--~~~~~~~~~a 391 (391) T protein:vir:11 363 TPVPPLEDLTFFQKITDSY--LVDFASRVNA 391 (391) T ss_pred EecCCcceEEEEEEEchHH--HHHHHHHhcC Confidence 9999999999999988774 8999999998 No 29 >protein:vir:100323 Length: 393 # NCBI annotation: tail sheath protein FI # Family: family:all:115 # MgeID: mge:1484 # MgeName: phi-MhaA1-PHL101 # Cross-refs: genbank:acc:YP_655492;genbank:gi:109289960;genbank:GeneID:4157366 Probab=100.00 E-value=7.3e-93 Score=525.70 Aligned_cols=379 Identities=15% Similarity=0.110 Sum_probs=306.6 Q ss_pred CceecCceEEEEecCCC-cccccCCCceEEEeecccC-----CCCcceEeCCHHHHHHHcCCcCCCchhHHHHHHHHhcC Q lcl|Aclame:pro 1 MALLSPGIEMKETSINS-TVVRSATGRAAIVGKFAWG-----PAYEVRQVTNEVELVDMFGSPDNVTAPYFMSAMNFLQY 74 (663) Q Consensus 1 ~~~~~PGVyveEv~~~~-~i~~v~Ts~~afvG~~~~G-----pv~~p~~i~s~~e~~~~FG~~~~~~~~~~~~~~~F~nG 74 (663) |++.+|||||+|++.++ +|..++|++++|||+++++ |+|+|++|+|+.||.+.|| ...++.+++..+|.|+ T Consensus 4 ~~~~~~GV~v~e~~~g~~~i~~~~tav~~~vgta~~~~~~~~pln~pv~i~s~~~~~~~~g---~~g~L~~al~~~~~~~ 80 (393) T protein:vir:10 4 LDTYLHGVEVVEVNAGGVTISTAATSVIGVVCTGDQADAETFPLNTPVLITNPLNYLEKAG---STGTLRRTLNSIGSIV 80 (393) T ss_pred CCccCCCeEEEEcCCCcceecccCcceeEEEeeccCcCcccccCccceEecchHHHHHhhC---Cccchhhhhhhhhccc Confidence 44667999999999766 5899999999999999987 9999999999999999999 4678889999999999 Q ss_pred CceEEEEEeccccccccccccccceeeeeccccccccccccccccccccccccceeeeeeecccceeeeeecccchhccc Q lcl|Aclame:pro 75 GNDLRLVRVIDMEKAKNASPLVNQVSVTITTEGQGYTVGDAITVKYNNATITEAGKVTAVDSDGKIKSLFVPTAEIIAKT 154 (663) Q Consensus 75 G~~~~vvRv~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~v~~~~~~g~~~~~~~~~~~~~~~~ 154 (663) |..||+||+......... . T Consensus 81 ~~~~~vv~v~~~~~~~~t-------------------~------------------------------------------ 99 (393) T protein:vir:10 81 KTPTVIVRVAESDDSDTL-------------------T------------------------------------------ 99 (393) T ss_pred CceEEEeecccCcccccc-------------------c------------------------------------------ Confidence 999999998532110000 0 Q ss_pred ccccccccceeceeeeecccccceeeeeecccccccccccccccccccccccccccccccccccccceeeecchhhcccc Q lcl|Aclame:pro 155 RQLGTYPTLGDNWRIDVSGASGGSAAALALGNIVVDSGVTFGNSEDAPAVMTSPAVMEKYAKFGMPLISAVYPGEIGSTV 234 (663) Q Consensus 155 ~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~g~~g~~v 234 (663) . . .. +... T Consensus 100 -~-------------~-------------ii----------g~~~----------------------------------- 107 (393) T protein:vir:10 100 -A-------------N-------------IV----------GTQE----------------------------------- 107 (393) T ss_pred -c-------------c-------------cc----------cccc----------------------------------- Confidence 0 0 00 0000 Q ss_pred ccccccccccccccccceecccceecccceeEEEecccccccceeeeccCCcceeeEeeeecccccccccchhhhhhhhc Q lcl|Aclame:pro 235 EVEIVSKTAFNSGAQQTIYPFGGTRTSNARGVIQYGPMTDDQFAIIVRRDGIVVESTVLSTRKGDRDVYGSNIFMDDYFR 314 (663) Q Consensus 235 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (663) T Consensus 108 -------------------------------------------------------------------------------- 107 (393) T protein:vir:10 108 -------------------------------------------------------------------------------- 107 (393) T ss_pred -------------------------------------------------------------------------------- Confidence Q ss_pred CCCceEEEEeecccCCccceeEEecCcccccccccchhhhHHHHHhhhhccccceeEEeeccCcCChhHHHHHHHHHHHH Q lcl|Aclame:pro 315 NGGSNFIFASSEGWPAGFTGIIQLGGGTSANADVGADELIKGWDLFSDREALHVNLMIAGACGSDGAEIASTVQKYVVSL 394 (663) Q Consensus 315 ~~~s~~v~~~~~~~~~~~~~~~~l~gg~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 394 (663) ....+++.++...+......++++++|+... .+++.+|+.+ T Consensus 108 ---------------------------------~~~~tgl~al~~~~~~~~~~p~li~apg~~~------~~~~~al~~~ 148 (393) T protein:vir:10 108 ---------------------------------NGKFTGIKALLTAQSTVFVKPKLLCVPQHDN------QAVATELLSV 148 (393) T ss_pred ---------------------------------cchhhHHHHHHhhhhhcceeeeeeeeccccc------hHHHHHHHHH Confidence 0000001111111111112234444444322 2456889999 Q ss_pred HHhhCCeEEEecccccccccccccccHHHHHHHHhhcccccchhhhccCcCcceEEEecCceeecccccCceeEechHHH Q lcl|Aclame:pro 395 ADDRQDCVAIVNPPAELMVGIPTSTAVKNIVEWRNGMTGSGEVVDNNMNISSTYAFIIGNYKYQYDKYNDINRWVPLAAD 474 (663) Q Consensus 395 ~~~~~~~~~i~d~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~p~~~~~d~~~~~~~~~p~s~~ 474 (663) |++++.++++.|+|. .+.+++++|+++ ++|.|+++||||++++|+.++..+++|||++ T Consensus 149 ~~~~~~~~~v~d~~~---------~t~~~ai~~~~~-------------~~s~~~~~~~P~~~~~d~~~~~~~~~p~s~~ 206 (393) T protein:vir:10 149 AKKLNAFAFISDNGA---------TTKEQAYTYRQN-------------FSQREGMMIFGDWKSYNTDKKAYDTDYAVAR 206 (393) T ss_pred hhccCcEEEEEcCCC---------CCHHHHHHHhhh-------------cCCceEEEEecccccccccCCceeEeehhHH Confidence 999999888888763 466788899875 5688999999999999999999999999999 Q ss_pred HHHHHHhhhhccCceecccceecceeecce---eeeeecChhhhhhhhhCCceEEEEeeCCCcEEEEcceecCCCCccce Q lcl|Aclame:pro 475 IAGLCAYTDQVSHPWMSPAGYRRGQIRNCI---KLAIEPKQSMRDTMYQVAINPVTGFAGGDGFVLFGDKMATQVPSPFD 551 (663) Q Consensus 475 ~AG~~a~~d~~~g~~~span~~~~~i~~~~---~~~~~~~~~~~~~Ln~~~in~i~~~~~~~G~~~wG~rT~~~~~~~~~ 551 (663) +||++||+|.++||||||+|+++.++.+.. .....+++.|++.||++|||+| +++ +||++||+||+++|+ +|+ T Consensus 207 ~Ag~~a~~d~~~G~~~spaN~~l~gi~~~~~~~~~~~~~~~~~~~~Ln~~gI~t~--~~~-~G~~~wG~rT~s~d~-~~~ 282 (393) T protein:vir:10 207 ACALQAYIDKTVGWHKNISNVELDGVTGITKAVEFDINESSTEANYLNEKGITIC--LNH-NGFRYWGSRTLATDT-RWA 282 (393) T ss_pred HHHHHHHhhcCCCcEEccCCceeeceeecceecccccCCCcchhHhHhhcCceEE--EcC-CCEEEEcccccCCCc-ccc Confidence 999999999999999999999887776643 2234456889999999999998 444 799999999998875 899 Q ss_pred eeehhhHHHHHHHHHHHHHHHhhcccCCHHHHHHHHHHHHHHHHHHHhcC--ceEEEEEEEccCCCCHHHhhCCEEEEEE Q lcl|Aclame:pro 552 RINVRRLFNMLKKNIGDTSKYELFENNDAFTRQSFRMETSQYLDGIRSLG--GCYDFRVVCDTTNNTPNVIDRNEFVGTI 629 (663) Q Consensus 552 ~i~vrR~~~~i~~~~~~~~~~~v~epn~~~~~~~v~~~i~~~L~~l~~~g--al~g~~v~~d~~~nt~~~i~~G~~~~~i 629 (663) ||++|||++||+++|++.++|+|||||++.+|++|+++++.||++||+.| +|.||+|+||++ ||++||++|+|+++| T Consensus 283 ~i~vrR~~~~i~~~i~~~~~~~v~e~~~~~~~~~i~~~i~~~L~~l~~~g~~al~g~~v~~~~~-nt~~~i~~G~~~~~i 361 (393) T protein:vir:10 283 FQQSVRTAQIIKETIGAGLAWAVDMPLTPLRVKTMLEAINNKLRSWASGDDPRILGARVWVAEE-ITADIIKSGKFVIKY 361 (393) T ss_pred eeehhhHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhccccccccceEEecCC-CCHHHhhCCEEEEEE Confidence 99999999999999999999999999999999999999999999999966 899999999975 888999999999999 Q ss_pred EEEecCcceEEEEEEEEeecccchhhhhhhhhcC Q lcl|Aclame:pro 630 YVKPPRSINYITLNMVATSTGANFDELIGPMQLA 663 (663) Q Consensus 630 ~~~p~~p~e~i~~~~~~~~~~~~~~e~~~~~~~~ 663 (663) +++|++|+|||+|++..+... |+++++.|+.- T Consensus 362 ~~~p~~p~e~I~~~~~~~~~~--~~~l~~~v~a~ 393 (393) T protein:vir:10 362 DYHWIPSLESLGLEQRVNDEY--VVDLVNTLKAL 393 (393) T ss_pred EEEecCCcceEEEEEEEchHH--HHHHHHHHhcC Confidence 999999999999999998875 89999998877 No 30 >protein:vir:1845 Length: 392 # NCBI annotation: tail sheath protein FI # Family: family:all:115 # MgeID: mge:324 # MgeName: 186 # Cross-refs: genbank:acc:NP_052269;genbank:gi:9634076;genbank:GeneID:1262448 Probab=100.00 E-value=6.8e-93 Score=525.87 Aligned_cols=383 Identities=15% Similarity=0.118 Sum_probs=308.2 Q ss_pred CceecCceEEEEecCCC-cccccCCCceEEEeecccC-----CCCcceEeCCHHHHHHHcCCcCCCchhHHHHHHHHhcC Q lcl|Aclame:pro 1 MALLSPGIEMKETSINS-TVVRSATGRAAIVGKFAWG-----PAYEVRQVTNEVELVDMFGSPDNVTAPYFMSAMNFLQY 74 (663) Q Consensus 1 ~~~~~PGVyveEv~~~~-~i~~v~Ts~~afvG~~~~G-----pv~~p~~i~s~~e~~~~FG~~~~~~~~~~~~~~~F~nG 74 (663) |+--+|||||+|++.++ +|.+++|++.+|||.++++ |+++|++|+|+.+|...||. ...+.+++..+|.|| T Consensus 1 m~~~~~Gv~v~e~~~g~~~i~~~~tav~g~vgta~~~~~~~~~~~~p~~its~~~~~~~~g~---~gtl~~al~~~~~ng 77 (392) T protein:vir:18 1 MSDFHHGTKVIEINDGTRVISTVATAIVGMVWTASDADAETFPLNEPVLITNVQSAIAKAGK---KGTLSASLQAIADQS 77 (392) T ss_pred CCCCCCCeEEEEcCCCceeeeccCcceeEEEEeccCCCCcccccccceEeechHHHHhhcCC---CcchHHHHHHhhccc Confidence 99445899999999776 5899999999999999876 89999999999999999995 567889999999999 Q ss_pred CceEEEEEeccccccccccccccceeeeeccccccccccccccccccccccccceeeeeeecccceeeeeecccchhccc Q lcl|Aclame:pro 75 GNDLRLVRVIDMEKAKNASPLVNQVSVTITTEGQGYTVGDAITVKYNNATITEAGKVTAVDSDGKIKSLFVPTAEIIAKT 154 (663) Q Consensus 75 G~~~~vvRv~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~v~~~~~~g~~~~~~~~~~~~~~~~ 154 (663) |..|+++|+..+....... .+. T Consensus 78 g~~~~vv~v~~~~~~~~~~----------------~t~------------------------------------------ 99 (392) T protein:vir:18 78 KPVTVVVRVAEGTGDDAEA----------------QTT------------------------------------------ 99 (392) T ss_pred CceEEEecccccccccccc----------------cch------------------------------------------ Confidence 9999999874321000000 000 Q ss_pred ccccccccceeceeeeecccccceeeeeecccccccccccccccccccccccccccccccccccccceeeecchhhcccc Q lcl|Aclame:pro 155 RQLGTYPTLGDNWRIDVSGASGGSAAALALGNIVVDSGVTFGNSEDAPAVMTSPAVMEKYAKFGMPLISAVYPGEIGSTV 234 (663) Q Consensus 155 ~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~g~~g~~v 234 (663) . + T Consensus 100 -----------------~------------------------d------------------------------------- 101 (392) T protein:vir:18 100 -----------------S------------------------N------------------------------------- 101 (392) T ss_pred -----------------h------------------------h------------------------------------- Confidence 0 0 Q ss_pred ccccccccccccccccceecccceecccceeEEEecccccccceeeeccCCcceeeEeeeecccccccccchhhhhhhhc Q lcl|Aclame:pro 235 EVEIVSKTAFNSGAQQTIYPFGGTRTSNARGVIQYGPMTDDQFAIIVRRDGIVVESTVLSTRKGDRDVYGSNIFMDDYFR 314 (663) Q Consensus 235 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (663) + . + T Consensus 102 -l--i---------------------------------------------G----------------------------- 104 (392) T protein:vir:18 102 -I--I---------------------------------------------G----------------------------- 104 (392) T ss_pred -h--e---------------------------------------------e----------------------------- Confidence 0 0 0 Q ss_pred CCCceEEEEeecccCCccceeEEecCcccccccccchhhhHHHHHhhhhccccceeEEeeccCcCChhHHHHHHHHHHHH Q lcl|Aclame:pro 315 NGGSNFIFASSEGWPAGFTGIIQLGGGTSANADVGADELIKGWDLFSDREALHVNLMIAGACGSDGAEIASTVQKYVVSL 394 (663) Q Consensus 315 ~~~s~~v~~~~~~~~~~~~~~~~l~gg~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 394 (663) +.+ ..+..++..++........+.++++++|+.. ...++++|..+ T Consensus 105 --------------------------~~~---~~~~~tg~~al~~~~~~~~~~p~il~ap~~~------~~~v~~~l~~~ 149 (392) T protein:vir:18 105 --------------------------GTD---ENGKYTGIKALLTAEAVTGVKPRILGVPGLD------TQEVATALASV 149 (392) T ss_pred --------------------------ccc---ccchhhhHHHHHhhhhhhceeehhcccCccc------hHHHHHHHHHH Confidence 000 0000011112222222222334555555543 23578899999 Q ss_pred HHhhCCeEEEecccccccccccccccHHHHHHHHhhcccccchhhhccCcCcceEEEecCceeecccccCceeEechHHH Q lcl|Aclame:pro 395 ADDRQDCVAIVNPPAELMVGIPTSTAVKNIVEWRNGMTGSGEVVDNNMNISSTYAFIIGNYKYQYDKYNDINRWVPLAAD 474 (663) Q Consensus 395 ~~~~~~~~~i~d~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~p~~~~~d~~~~~~~~~p~s~~ 474 (663) |++++ +|+++|+|.+ .+.+++.+|+++ ++|+|+++||||+++.|+.++..+++|||++ T Consensus 150 ~~~~~-~~~~~d~~~~--------~~~~~a~~~~~~-------------~~s~~~~~~~p~~~~~d~~~~~~~~~p~s~~ 207 (392) T protein:vir:18 150 CISLR-AFGYVSAWGC--------KTISEAMAYREN-------------FSQRELMVIWPDFLAWDTTANATATAYATAR 207 (392) T ss_pred HhhcC-cEEEEecCCC--------CCHHHHHHHHhh-------------ccCceEEEEeCceeeecccCCceEEechHHH Confidence 99887 8999998754 467888899864 6789999999999999999999999999999 Q ss_pred HHHHHHhhhhccCceecccceecceeeccee---eeeecChhhhhhhhhCCceEEEEeeCCCcEEEEcceecCCCCccce Q lcl|Aclame:pro 475 IAGLCAYTDQVSHPWMSPAGYRRGQIRNCIK---LAIEPKQSMRDTMYQVAINPVTGFAGGDGFVLFGDKMATQVPSPFD 551 (663) Q Consensus 475 ~AG~~a~~d~~~g~~~span~~~~~i~~~~~---~~~~~~~~~~~~Ln~~~in~i~~~~~~~G~~~wG~rT~~~~~~~~~ 551 (663) +||++||+|.++||||||+|+++.+|.++.. .+..+++.|++.||++|||+|. ++ +||++||+||+++|+ +|| T Consensus 208 ~AG~~a~~d~~~g~~~spaN~~l~gi~~~~~~~~~~~~~~~~~~~~Ln~~gI~t~~--~~-~G~~~wG~rT~~~d~-~~~ 283 (392) T protein:vir:18 208 ALGLRAYIDQTIGWHKTLSNVGVQGVTGISASVFWDLQASGTDADLLNEAGVTTLV--RK-DGFRFWGNRTCSDDP-LFL 283 (392) T ss_pred HHHHHHhhhccCCceEccCCceeeceeecceecccccCCCcchhhhhhhcCceEEE--cC-CCEEEEcccccCCCc-ccc Confidence 9999999999999999999998777766422 2344567899999999999984 44 799999999998875 899 Q ss_pred eeehhhHHHHHHHHHHHHHHHhhcccCCHHHHHHHHHHHHHHHHHHHhcCceEEEEEEEccCCCCHHHhhCCEEEEEEEE Q lcl|Aclame:pro 552 RINVRRLFNMLKKNIGDTSKYELFENNDAFTRQSFRMETSQYLDGIRSLGGCYDFRVVCDTTNNTPNVIDRNEFVGTIYV 631 (663) Q Consensus 552 ~i~vrR~~~~i~~~~~~~~~~~v~epn~~~~~~~v~~~i~~~L~~l~~~gal~g~~v~~d~~~nt~~~i~~G~~~~~i~~ 631 (663) ||++||+++||+++|+++++|+|||||++.+|++|+.+|++||++||++|+|.||+|+||+++||+++|++|+|+++|++ T Consensus 284 ~i~~rR~~~~i~~~i~~~~~~~v~e~n~~~~~~~i~~~i~~~L~~l~~~gal~g~~v~~d~~~nt~~~i~~G~~~~~v~~ 363 (392) T protein:vir:18 284 FENYTRTAQVLADTMAEAHMWAVDKPITASLIRDIVDGINAKFRELKSNGYIVDGECWFDEESNDKETLKAGKLYIDYDY 363 (392) T ss_pred eeehhhHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhcCcccceEEEEecCCCCHHHhhCCeEEEEEEE Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred EecCcceEEEEEEEEeecccchhhhhhhhhc Q lcl|Aclame:pro 632 KPPRSINYITLNMVATSTGANFDELIGPMQL 662 (663) Q Consensus 632 ~p~~p~e~i~~~~~~~~~~~~~~e~~~~~~~ 662 (663) +|++|+|||+|++++.... +++++++|+. T Consensus 364 ~p~~p~e~I~~~~~~~~~~--~~~~~~~~~~ 392 (392) T protein:vir:18 364 TPVPPLESLTLRQRITDKY--LVNLAESVNS 392 (392) T ss_pred EecCCcceEEEEEEEchHH--HHHHHHHhcC Confidence 9999999999999988874 5666666666 No 31 >protein:vir:96740 Length: 388 # NCBI annotation: phage tail sheath protein FI-like # Family: family:all:115 # MgeID: mge:1628 # MgeName: VP882 # Cross-refs: genbank:acc:YP_001039839;genbank:gi:126010913;genbank:GeneID:5076250 Probab=100.00 E-value=2.8e-89 Score=506.09 Aligned_cols=375 Identities=14% Similarity=0.125 Sum_probs=305.3 Q ss_pred CceecCceEEEEecCCC-cccccCCCceEEEeecccC----CCCcceEeCCHHHHHHHcCCcCCCchhHHHHHHHHhcCC Q lcl|Aclame:pro 1 MALLSPGIEMKETSINS-TVVRSATGRAAIVGKFAWG----PAYEVRQVTNEVELVDMFGSPDNVTAPYFMSAMNFLQYG 75 (663) Q Consensus 1 ~~~~~PGVyveEv~~~~-~i~~v~Ts~~afvG~~~~G----pv~~p~~i~s~~e~~~~FG~~~~~~~~~~~~~~~F~nGG 75 (663) |+.-+|||||+|++.++ +|..+.|++++|||+++.+ |.++|++|.++.++.+.||.......+..++..+|.++| T Consensus 4 ~~~~~hGv~v~ev~~g~~~i~~~~tavi~~Vgta~~ad~~~p~~~~~~i~~~~d~~~~~~~~~~~gtl~~al~~~~~~~~ 83 (388) T protein:vir:96 4 IDQFEHNGISIETHEPPPPMGPPGDNVVAWVVTAPDKHADVAFSVPFRVANTADAQYLDSTGNELGTGWHAASETLKKTS 83 (388) T ss_pred CCCCCCceEEEEcCCCcccccccCcceeEEEEecCCCccccccccceeeecchhhhhhhccccccccchhhhHhhhccCC Confidence 66556899999999876 5899999999999999775 999999999999999999988888899999999999999 Q ss_pred ceEEEEEeccccccccccccccceeeeeccccccccccccccccccccccccceeeeeeecccceeeeeecccchhcccc Q lcl|Aclame:pro 76 NDLRLVRVIDMEKAKNASPLVNQVSVTITTEGQGYTVGDAITVKYNNATITEAGKVTAVDSDGKIKSLFVPTAEIIAKTR 155 (663) Q Consensus 76 ~~~~vvRv~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~v~~~~~~g~~~~~~~~~~~~~~~~~ 155 (663) ..|+++|+..+..... +. .+ T Consensus 84 ~~~~vv~v~~g~~~~a--------------------------------t~----------------------a~------ 103 (388) T protein:vir:96 84 VPQYFIVVPEGADDAA--------------------------------TM----------------------AN------ 103 (388) T ss_pred ceEEEEEecccccccc--------------------------------cc----------------------ce------ Confidence 9999999854311000 00 00 Q ss_pred cccccccceeceeeeecccccceeeeeecccccccccccccccccccccccccccccccccccccceeeecchhhccccc Q lcl|Aclame:pro 156 QLGTYPTLGDNWRIDVSGASGGSAAALALGNIVVDSGVTFGNSEDAPAVMTSPAVMEKYAKFGMPLISAVYPGEIGSTVE 235 (663) Q Consensus 156 ~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~g~~g~~v~ 235 (663) + . | T Consensus 104 ----------------------------i-----------------------------------------i----g---- 106 (388) T protein:vir:96 104 ----------------------------I-----------------------------------------I----G---- 106 (388) T ss_pred ----------------------------e-----------------------------------------e----e---- Confidence 0 0 0 Q ss_pred cccccccccccccccceecccceecccceeEEEecccccccceeeeccCCcceeeEeeeecccccccccchhhhhhhhcC Q lcl|Aclame:pro 236 VEIVSKTAFNSGAQQTIYPFGGTRTSNARGVIQYGPMTDDQFAIIVRRDGIVVESTVLSTRKGDRDVYGSNIFMDDYFRN 315 (663) Q Consensus 236 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (663) T Consensus 107 -------------------------------------------------------------------------------- 106 (388) T protein:vir:96 107 -------------------------------------------------------------------------------- 106 (388) T ss_pred -------------------------------------------------------------------------------- Confidence Q ss_pred CCceEEEEeecccCCccceeEEecCcccccccccchhhhHHHHHhhhhccccceeEEeeccCcCChhHHHHHHHHHHHHH Q lcl|Aclame:pro 316 GGSNFIFASSEGWPAGFTGIIQLGGGTSANADVGADELIKGWDLFSDREALHVNLMIAGACGSDGAEIASTVQKYVVSLA 395 (663) Q Consensus 316 ~~s~~v~~~~~~~~~~~~~~~~l~gg~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 395 (663) +.+ ...+...++.++... ...++++++|+... ..+++.+|+++| T Consensus 107 -------------------------~~~--~~tg~~~gl~al~~~----~~~p~il~aPg~s~-----~~~v~~al~~~~ 150 (388) T protein:vir:96 107 -------------------------GID--PTTGRRTGIAALTEC----TERPTLIGAPGFSQ-----NKAVIDALASMA 150 (388) T ss_pred -------------------------ecc--cccchhhHHHHhhhc----ccceeEEEeecccc-----chHHHHHHHHHH Confidence 000 000000111111111 11245566665332 245788999999 Q ss_pred HhhCCeEEEecccccccccccccccHHHHHHHHhhcccccchhhhccCcCcceEEEecCceeecccccCceeEechHHHH Q lcl|Aclame:pro 396 DDRQDCVAIVNPPAELMVGIPTSTAVKNIVEWRNGMTGSGEVVDNNMNISSTYAFIIGNYKYQYDKYNDINRWVPLAADI 475 (663) Q Consensus 396 ~~~~~~~~i~d~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~p~~~~~d~~~~~~~~~p~s~~~ 475 (663) ++++ ||+++|+|.+ +.++..+|+... ...+++|+|+++||||++++|+.++..+++|||+++ T Consensus 151 ~~~~-~~~i~D~p~~---------~~~~~~~~~~~~--------~~~~~~s~~~~~~~P~~~~~d~~~~~~~~~p~s~~~ 212 (388) T protein:vir:96 151 KRLK-CRAVIDGPSG---------STQDAIDLSGLL--------GGEGTGHDRVYMVDPMPAIYSRKAQGNIYVPPSTIA 212 (388) T ss_pred hhcC-cEEEEeccCC---------chhHHHHHHhhh--------hccCcCcceEEEEeCceeeecccCCceeeechHHHH Confidence 9886 8999999854 334455555432 245689999999999999999999999999999999 Q ss_pred HHHHHhhhhccCceecccceecceeecc---eeeeeecChhhhhhhhhCCceEEEEeeCCCcEEEEcceecCCCCcccee Q lcl|Aclame:pro 476 AGLCAYTDQVSHPWMSPAGYRRGQIRNC---IKLAIEPKQSMRDTMYQVAINPVTGFAGGDGFVLFGDKMATQVPSPFDR 552 (663) Q Consensus 476 AG~~a~~d~~~g~~~span~~~~~i~~~---~~~~~~~~~~~~~~Ln~~~in~i~~~~~~~G~~~wG~rT~~~~~~~~~~ 552 (663) ||++||+| +||||+|++++ +.|+ +.....+++.|++.||++|||+|++|++ +|+++||+||++ |+| T Consensus 213 AG~~a~~D----~~~spaN~~i~-i~g~~~~~~~~~~~~~~~~~~Ln~~gI~~i~~~~~-~G~~~wG~rT~~-----~~~ 281 (388) T protein:vir:96 213 MGAVAAVK----PWESPGNQGVL-IQDVARVIDYNILDKSTEGDLLNRNGVSYFARTSM-GGFSLIGNRTVT-----GKF 281 (388) T ss_pred HHHHHhhc----CcccccCeeEE-eeeecccccccccCChhhHHhhhhcCceEEEEecC-CcEEEEcccccC-----Ccc Confidence 99999999 69999999984 6564 3445666788999999999999999986 799999999984 999 Q ss_pred eehhhHHHHHHHHHHHHHHHhhcccCCHHHHHHHHHHHHHHHHHHHhcCceEEEEEEEccCCCCHHHhhCCEEEEEEEEE Q lcl|Aclame:pro 553 INVRRLFNMLKKNIGDTSKYELFENNDAFTRQSFRMETSQYLDGIRSLGGCYDFRVVCDTTNNTPNVIDRNEFVGTIYVK 632 (663) Q Consensus 553 i~vrR~~~~i~~~~~~~~~~~v~epn~~~~~~~v~~~i~~~L~~l~~~gal~g~~v~~d~~~nt~~~i~~G~~~~~i~~~ 632 (663) |++||+++||+++|+++++|+|||||++.+|.+|+++|+.||++||++|+|.||++.||+++||++||++|+|+++|+++ T Consensus 282 i~vrR~~~~i~~si~~~~~~~v~epn~~~~~~~i~~~i~~fL~~l~~~Gal~g~~~~~d~~~nt~~~i~~G~~~~~i~~~ 361 (388) T protein:vir:96 282 ISFVGLEDAIARKLEAASQRAMSKQLTKSFMEQEIKKINLFMQDLVAAEIIPGGEVYLHPTLNTVERYKNGSWYIVIDYG 361 (388) T ss_pred eeehhhHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeEEEEecCCCCHHHhhCCEEEEEEEEE Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred ecCcceEEEEEEEEeecccc--hhhhh Q lcl|Aclame:pro 633 PPRSINYITLNMVATSTGAN--FDELI 657 (663) Q Consensus 633 p~~p~e~i~~~~~~~~~~~~--~~e~~ 657 (663) |++|+|||+|+++.+....+ |+++| T Consensus 362 p~~pae~I~~~~~~~~~~~~~~~~~~~ 388 (388) T protein:vir:96 362 RYSPNEHMIFHLNAVDRIVEEFIEEVL 388 (388) T ss_pred ecCCcceEEEEEEEchHHHHHHHHHhC Confidence 99999999999999988776 77777 No 32 >protein:vir:10336 Length: 386 # NCBI annotation: ORF39 # Family: family:all:115 # MgeID: mge:182 # MgeName: VHML # Cross-refs: genbank:acc:NP_758931;genbank:gi:27311206;genbank:GeneID:956116 Probab=100.00 E-value=4.4e-89 Score=505.00 Aligned_cols=376 Identities=15% Similarity=0.166 Sum_probs=292.0 Q ss_pred Cc-eecCceEEEEecCCC-cccccCCCceEEEeecccC-----CCCcceEeCCHHHHHHHcCCcCCCchhHHHHHHHHhc Q lcl|Aclame:pro 1 MA-LLSPGIEMKETSINS-TVVRSATGRAAIVGKFAWG-----PAYEVRQVTNEVELVDMFGSPDNVTAPYFMSAMNFLQ 73 (663) Q Consensus 1 ~~-~~~PGVyveEv~~~~-~i~~v~Ts~~afvG~~~~G-----pv~~p~~i~s~~e~~~~FG~~~~~~~~~~~~~~~F~n 73 (663) |. |.+|||||+|++.++ ++.+++|++++|||+++.+ |+++|++++|+.++...||+ ...+..++.++|.| T Consensus 1 M~~~~~~Gv~v~ev~~~~~~i~~v~tav~~~vg~a~~a~~~~~~~~~pv~i~s~~~~~~~~g~---~~tl~~a~~~~~~~ 77 (386) T protein:vir:10 1 MAEQYLHGAEVVEIDNGARPIRTAQSGVIGLVGTAPDADATAFPLNTPVLIAGSRREAAKLGA---GGTLPQAIDGIFDQ 77 (386) T ss_pred CccccCCCeEEEEcCCCcccccccCcceeEEEEecCCCCCcccccccceEecchHHHHhhcCC---CcchhHHHHHHhcc Confidence 76 889999999999766 5899999999999998875 89999999999999999984 46688899999999 Q ss_pred CCceEEEEEeccccccccccccccceeeeeccccccccccccccccccccccccceeeeeeecccceeeeeecccchhcc Q lcl|Aclame:pro 74 YGNDLRLVRVIDMEKAKNASPLVNQVSVTITTEGQGYTVGDAITVKYNNATITEAGKVTAVDSDGKIKSLFVPTAEIIAK 153 (663) Q Consensus 74 GG~~~~vvRv~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~v~~~~~~g~~~~~~~~~~~~~~~ 153 (663) ||..||++++..+.....+. . T Consensus 78 gg~~~~vv~~~~~~~~~~t~-------------------~---------------------------------------- 98 (386) T protein:vir:10 78 TGAVVVVIRVDEGVDSAATQ-------------------S---------------------------------------- 98 (386) T ss_pred CceeEEEeeccccccccccc-------------------h---------------------------------------- Confidence 99999999874332110000 0 Q ss_pred cccccccccceeceeeeecccccceeeeeecccccccccccccccccccccccccccccccccccccceeeecchhhccc Q lcl|Aclame:pro 154 TRQLGTYPTLGDNWRIDVSGASGGSAAALALGNIVVDSGVTFGNSEDAPAVMTSPAVMEKYAKFGMPLISAVYPGEIGST 233 (663) Q Consensus 154 ~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~g~~g~~ 233 (663) .. .+.. ...... ..+ T Consensus 99 -~~---------------------------ig~~-------~~~t~~-------------------------~tg----- 113 (386) T protein:vir:10 99 -NV---------------------------IGKV-------DADTEQ-------------------------YTG----- 113 (386) T ss_pred -hh---------------------------hccc-------ccccch-------------------------hhh----- Confidence 00 0000 000000 000 Q ss_pred cccccccccccccccccceecccceecccceeEEEecccccccceeeeccCCcceeeEeeeecccccccccchhhhhhhh Q lcl|Aclame:pro 234 VEVEIVSKTAFNSGAQQTIYPFGGTRTSNARGVIQYGPMTDDQFAIIVRRDGIVVESTVLSTRKGDRDVYGSNIFMDDYF 313 (663) Q Consensus 234 v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (663) +.... .... .+ T Consensus 114 --l~~l~------------------------------------------~~~~---~~---------------------- 124 (386) T protein:vir:10 114 --ILALL------------------------------------------SAEN---TV---------------------- 124 (386) T ss_pred --hHHhh------------------------------------------hhcc---cc---------------------- Confidence 00000 0000 00 Q ss_pred cCCCceEEEEeecccCCccceeEEecCcccccccccchhhhHHHHHhhhhccccceeEEeeccCcCChhHHHHHHHHHHH Q lcl|Aclame:pro 314 RNGGSNFIFASSEGWPAGFTGIIQLGGGTSANADVGADELIKGWDLFSDREALHVNLMIAGACGSDGAEIASTVQKYVVS 393 (663) Q Consensus 314 ~~~~s~~v~~~~~~~~~~~~~~~~l~gg~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 393 (663) ...+++..++.. .....+..+|.. T Consensus 125 ---------------------------------------------------~~~p~i~~ap~~-----~~~~~v~~~l~~ 148 (386) T protein:vir:10 125 ---------------------------------------------------KVQPRILIAPGF-----SNQKAVADQLVS 148 (386) T ss_pred ---------------------------------------------------cccccccccccc-----cchhHHHHHHHH Confidence 000000111111 011234556667 Q ss_pred HHHhhCCeEEEecccccccccccccccHHHHHHHHhhcccccchhhhccCcCcceEEEecCceeecccccCceeEechHH Q lcl|Aclame:pro 394 LADDRQDCVAIVNPPAELMVGIPTSTAVKNIVEWRNGMTGSGEVVDNNMNISSTYAFIIGNYKYQYDKYNDINRWVPLAA 473 (663) Q Consensus 394 ~~~~~~~~~~i~d~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~p~~~~~d~~~~~~~~~p~s~ 473 (663) .|++++ .+.+.|++ ..+.+++.+|+.. ++|+|+++||||++++|+.++..+++|||+ T Consensus 149 ~~~~~~-~~~~~~~~---------~~~~~~a~~~~~~-------------~~s~~~~~~~p~~~v~~~~~~~~~~~p~s~ 205 (386) T protein:vir:10 149 VADTAA-WLCHSGWS---------NTTDAAAITYREL-------------FGSRRCEVVDPWYKVWDVETSAHIIQPPSA 205 (386) T ss_pred hhcceE-EEEEeCCC---------CCchHHHHHhhhc-------------ccccceEEecCceeeeccccccceeechHH Confidence 776665 55566654 3455677777754 678999999999999999999999999999 Q ss_pred HHHHHHHhhhhccCceecccceecceeecce---eeeeecChhhhhhhhhCCceEEEEeeCCCcEEEEcceecCCCCccc Q lcl|Aclame:pro 474 DIAGLCAYTDQVSHPWMSPAGYRRGQIRNCI---KLAIEPKQSMRDTMYQVAINPVTGFAGGDGFVLFGDKMATQVPSPF 550 (663) Q Consensus 474 ~~AG~~a~~d~~~g~~~span~~~~~i~~~~---~~~~~~~~~~~~~Ln~~~in~i~~~~~~~G~~~wG~rT~~~~~~~~ 550 (663) ++||++||+|.++||||||+|+++.+|.+.. ..+...++.|++.||++||+++ |++ +|+++||+||+++|+ +| T Consensus 206 ~~ag~~a~~D~~~G~~~spaN~~l~gv~~~~~~~~~~~~~~~~~~~~l~~~gi~~~--~~~-~G~~~wG~rT~~~d~-~~ 281 (386) T protein:vir:10 206 RHAGVMAKVHNTLGFWWSNSNQEILGIDGLCRPVDFKLDDPTCRANLLNAKEVTTT--IQQ-NGFRVWGDRTCSADS-KW 281 (386) T ss_pred HHHHHHHHhhhcCCcEEccCCceeecccccceecccccccCcchhhhhhhcCcEEE--EcC-CCEEEEcccccCCCc-cc Confidence 9999999999999999999999987777753 2334456889999999999876 565 799999999998774 89 Q ss_pred eeeehhhHHHHHHHHHHHHHHHhhcccCCHHHHHHHHHHHHHHHHHHHhcCceEEEEEEEccCCCCHHHhhCCEEEEEEE Q lcl|Aclame:pro 551 DRINVRRLFNMLKKNIGDTSKYELFENNDAFTRQSFRMETSQYLDGIRSLGGCYDFRVVCDTTNNTPNVIDRNEFVGTIY 630 (663) Q Consensus 551 ~~i~vrR~~~~i~~~~~~~~~~~v~epn~~~~~~~v~~~i~~~L~~l~~~gal~g~~v~~d~~~nt~~~i~~G~~~~~i~ 630 (663) +||++||+++||+++|+++++|+|||||++.+|++|+++|++||++||++|+|.||+|+||+++||+++|++|+|+++|+ T Consensus 282 ~~i~vrR~~~~i~~~~~~~~~~~v~e~~~~~~~~~i~~~i~~~L~~l~~~g~l~g~~v~~d~~~nt~~~~~~G~~~~~i~ 361 (386) T protein:vir:10 282 AFKNVVITNDMIADSLVRNHLWAVDRNITKTYVEDVTEGVNNYLRHLKNIGAIAGGECWVDPELNSPDQIQQGKVYFDYD 361 (386) T ss_pred ceeehhhHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeEEEEcccCCCHHHhhCCeEEEEEE Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred EEecCcceEEEEEEEEeecccchhhhh Q lcl|Aclame:pro 631 VKPPRSINYITLNMVATSTGANFDELI 657 (663) Q Consensus 631 ~~p~~p~e~i~~~~~~~~~~~~~~e~~ 657 (663) ++|++|+|||+|+++++.. .|++++ T Consensus 362 ~~p~~p~e~i~~~~~~~~~--~~~~~~ 386 (386) T protein:vir:10 362 FSAYAPAEHITFRSHMVNG--YLTEVV 386 (386) T ss_pred EEecCCceeEEEEEEEehh--HHHhhC Confidence 9999999999999999887 588988 No 33 >protein:vir:5833 Length: 742 # NCBI annotation: similar to tail sheath protein # Family: family:all:661 # MgeID: mge:123 # MgeName: RM 378 # Cross-refs: genbank:acc:NP_835619;genbank:gi:30044022 Probab=100.00 E-value=4.3e-77 Score=439.26 Aligned_cols=530 Identities=19% Similarity=0.168 Sum_probs=268.2 Q ss_pred Ccee--------cCceEEEEecCCCcccccCCCceEEEeecccCCCCcceEeCCHHHHHHHcCCcCCCchhHHHHHHHHh Q lcl|Aclame:pro 1 MALL--------SPGIEMKETSINSTVVRSATGRAAIVGKFAWGPAYEVRQVTNEVELVDMFGSPDNVTAPYFMSAMNFL 72 (663) Q Consensus 1 ~~~~--------~PGVyveEv~~~~~i~~v~Ts~~afvG~~~~Gpv~~p~~i~s~~e~~~~FG~~~~~~~~~~~~~~~F~ 72 (663) -||. +-|.|.|-++.-..--.---+|-+++---+|||+--|-+ +-.-.|+.+-|-+....|. --+.-=+ T Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~--~~~~~~~ 278 (742) T protein:vir:58 202 AEYGTPTSSLTLYKGFYLEGIDLNSFNKQFVVSIENITVNREKGQVLYPSF-DVVVHFRDIRGVSANTEYI--RFRQVNL 278 (742) T ss_pred cccCCCccceeeeecccccccccCcccceeeEEEeeeeecccCCceeccce-eEEEEEeeccCCCCCccce--eeeeeec Confidence 2333 337777777642211010111444454557787643310 1111233333433322221 1122334 Q ss_pred cCCceEEEEEeccccccccccccccceeeeeccccccccccccccccccccccccceeeeeee-cccceeeeeecccchh Q lcl|Aclame:pro 73 QYGNDLRLVRVIDMEKAKNASPLVNQVSVTITTEGQGYTVGDAITVKYNNATITEAGKVTAVD-SDGKIKSLFVPTAEII 151 (663) Q Consensus 73 nGG~~~~vvRv~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~v~~~~-~~g~~~~~~~~~~~~~ 151 (663) |--+.-||+||.+.-+.... ..+ +.+++. ..+.. ..+++.... .++..... .. . T Consensus 279 ~~~~~~~~~~~~~~~~~~~~-----~~~--~~~g~~---~~n~~----------~~~~~~~~~~~~~~~~~~--s~---~ 333 (742) T protein:vir:58 279 NPESPNYIERVIGNMTFEFD-----GER--IVTGGE---YPNQV----------PFLRVVVSQDIKQNVAGV--EK---W 333 (742) T ss_pred CCCCcceeeecccceeeeec-----cce--eeeccc---ccccc----------cceeeEeccccCcCccce--eE---E Confidence 66677888888753221111 000 001110 00000 001110000 00000000 00 0 Q ss_pred cccccccccccceeceeeeecccccceeeeeecccccccccccccccccccccccccccccccccccccceeeecchhhc Q lcl|Aclame:pro 152 AKTRQLGTYPTLGDNWRIDVSGASGGSAAALALGNIVVDSGVTFGNSEDAPAVMTSPAVMEKYAKFGMPLISAVYPGEIG 231 (663) Q Consensus 152 ~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~g~~g 231 (663) ......+. -..++..... +........+. +.. ..+. ........ .+...| T Consensus 334 ~~~~~~~~-~~v~d~~~~~----~~~~~v~~~~t----~~~------~~pp--------------~~~~~~e~-v~~ngG 383 (742) T protein:vir:58 334 VPVGFEGI-YSVGDFTVIV----NELTNVSIPVT----DSA------IIPP--------------MRFTRIEQ-ITLSGG 383 (742) T ss_pred Eecccccc-ccccceeeec----cccccceeecc----ccc------cCCc--------------ccccccce-eecccC Confidence 00000000 0000000000 00000000000 000 0000 00000000 011111 Q ss_pred cccccccccccccccccccceecccceecccceeEEEecccccccceeeeccCCcceeeEeeeecccccccccchhhhhh Q lcl|Aclame:pro 232 STVEVEIVSKTAFNSGAQQTIYPFGGTRTSNARGVIQYGPMTDDQFAIIVRRDGIVVESTVLSTRKGDRDVYGSNIFMDD 311 (663) Q Consensus 232 ~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (663) ..+.+............... ....................+ .......+.....++..... .... T Consensus 384 ~~f~v~s~~~~g~~i~~~~a--s~~~s~ln~~~~V~Gt~aa~~---------~~d~~t~~~v~s~~~alp~~----a~sv 448 (742) T protein:vir:58 384 ASFSVISNQPYGFNIQDSRH--SYWLSPFKDDELIIGTELVLP---------ALDVSTEFGVSSWEEALPEF----SFLM 448 (742) T ss_pred cceEEEEecccCcceeccCc--ceEEeccCCceEEEeehhhcc---------ccccchheecccccccccee----eEEE Confidence 11111100000000000000 000000000000000000000 00000000000000000000 0000 Q ss_pred hhcCCCceEEEEeecccCCccceeEEecCccccccc-ccchhhhHHHHHhhhhccccceeEEeeccCcCChhHHHHHHHH Q lcl|Aclame:pro 312 YFRNGGSNFIFASSEGWPAGFTGIIQLGGGTSANAD-VGADELIKGWDLFSDREALHVNLMIAGACGSDGAEIASTVQKY 390 (663) Q Consensus 312 ~~~~~~s~~v~~~~~~~~~~~~~~~~l~gg~d~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 390 (663) .+ .+++. .............++.+.... .+..++ +..+...+ +++++++|+.... ..+.+ T Consensus 449 ~l-aGG~d-------g~v~v~~~~~D~iG~~~~~d~~~adrTG---L~ALlev~--eVtILiAPG~t~~------~v~aa 509 (742) T protein:vir:58 449 PF-QGGSD-------GYIRVDENEPDTIGRVKITPALLANYER---LLPLLTED--QFDLVLTPYLTFA------DHAGT 509 (742) T ss_pred ee-cCCcc-------ccccccCCCcccccccccccccccchhH---HHHhhhcC--CCcEEEEcCCCch------HHHHH Confidence 00 00100 000000000001111111111 112223 33343333 4577888876432 23456 Q ss_pred HHHHHHhhCCeE-EEecccccccccccccccHHHHHHHHhhcccccchhhhccCcCcceEEEecCceeecccccCceeEe Q lcl|Aclame:pro 391 VVSLADDRQDCV-AIVNPPAELMVGIPTSTAVKNIVEWRNGMTGSGEVVDNNMNISSTYAFIIGNYKYQYDKYNDINRWV 469 (663) Q Consensus 391 ~~~~~~~~~~~~-~i~d~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~p~~~~~d~~~~~~~~~ 469 (663) +.++|+..++|+ ++.|+|.. ..+.+++++|++. ++|+|+++||||+++.+ ++..+++ T Consensus 510 v~A~la~a~~Rl~vL~D~P~~-------~tt~~~A~a~r~~-------------~nSsraaly~PwVkv~d--~~~~r~v 567 (742) T protein:vir:58 510 VNAFINRAENRFLYLFDIAGD-------DDTENLAISLAGY-------------INSSFATTFFPWVRRLT--NKGMRTV 567 (742) T ss_pred HHHHHHhhcCCeEEEEecCCC-------CchHHHHHHHHhc-------------cCCceEEEEeceeeecc--CCcceee Confidence 667777655554 45576643 2344566777653 67899999999999876 5678999 Q ss_pred chHHHHHHHHHhhhhccCceecccceecceeecceeeeeecChhhhhhhhhCCceEEEEeeCCCcEEEEcceecCCCCcc Q lcl|Aclame:pro 470 PLAADIAGLCAYTDQVSHPWMSPAGYRRGQIRNCIKLAIEPKQSMRDTMYQVAINPVTGFAGGDGFVLFGDKMATQVPSP 549 (663) Q Consensus 470 p~s~~~AG~~a~~d~~~g~~~span~~~~~i~~~~~~~~~~~~~~~~~Ln~~~in~i~~~~~~~G~~~wG~rT~~~~~~~ 549 (663) |||+++||++||+|.++|+|+||+|+.+ +.+ ...++.|++.||++|||+|++| + +||++||+||+++++++ T Consensus 568 PpSgaIAGL~ARtD~erGvw~SPANrgi--i~~-----~~~s~se~d~LN~~GINtIrsf-G-~G~rlWGnRTlassDs~ 638 (742) T protein:vir:58 568 PASLAAYRSIRTTDPETGLAPVGARRGV--VTG-----EPVRQVDWEDLYNNRINPIVRV-G-NDVLLFGQKTMLNVNSA 638 (742) T ss_pred chHHHHHHHHHHhccCCceEecCCccee--eec-----cccchhhHHHHhhCCceEEEEC-C-CcEEEEcceecCCCCcc Confidence 9999999999999999999999999853 222 3457899999999999999987 4 69999999999776679 Q ss_pred ceeeehhhHHHHHHHHHHHHHHHhhcccCCHHHHHHHHHHHHHHHHHHHhcCceEEEEEEEccCCCCHHHhhCCEEEEEE Q lcl|Aclame:pro 550 FDRINVRRLFNMLKKNIGDTSKYELFENNDAFTRQSFRMETSQYLDGIRSLGGCYDFRVVCDTTNNTPNVIDRNEFVGTI 629 (663) Q Consensus 550 ~~~i~vrR~~~~i~~~~~~~~~~~v~epn~~~~~~~v~~~i~~~L~~l~~~gal~g~~v~~d~~~nt~~~i~~G~~~~~i 629 (663) |||||+||+++||+++|+++++|+||||||+.||++|+++|++||++||++|+|.||+|+||+ +||++||++|+|+++| T Consensus 639 wryInVRRlfd~Ie~SI~~a~q~~VfEPNd~~L~~sIk~sInafL~~L~aqGALlGfrV~lDe-tNTpeDI~~Gklvv~I 717 (742) T protein:vir:58 639 LNRINVRRLLIVMRNRISQILSSYLFENNTSENRLRAEALVRQYLESLRLRGAVTDYEVAIDS-VTTPTDIDNNTLRARV 717 (742) T ss_pred cceEeehhhHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeEEEEcC-CCCHHHhhCCEEEEEE Confidence 999999999999999999999999999999999999999999999999999999999999995 6999999999999999 Q ss_pred EEEecCcceEEEEEEEEeecccchh Q lcl|Aclame:pro 630 YVKPPRSINYITLNMVATSTGANFD 654 (663) Q Consensus 630 ~~~p~~p~e~i~~~~~~~~~~~~~~ 654 (663) +++|++|||||+|+|++++.+++|+ T Consensus 718 ~vAP~~PAEfI~lrf~it~tga~Fs 742 (742) T protein:vir:58 718 TVQPARSIEYIDITFVITPTGVEIT 742 (742) T ss_pred EEEccCCcceEEEEEEEEecccccC Confidence 9999999999999999999999999 No 34 >protein:vir:63742 Length: 562 # NCBI annotation: Tsh # Family: family:all:2449 # MgeID: mge:1517 # MgeName: P100 # Cross-refs: genbank:gi:82547629;genbank:GeneID:3783475 Probab=100.00 E-value=2e-66 Score=380.76 Aligned_cols=537 Identities=14% Similarity=0.070 Sum_probs=311.9 Q ss_pred Cc-eecCceEEEEecCCCc-ccccCCCceEEEeecccCCCCcceEeCCHHHHHHHcCCcCCCchhHHHHHHHHhcCCceE Q lcl|Aclame:pro 1 MA-LLSPGIEMKETSINST-VVRSATGRAAIVGKFAWGPAYEVRQVTNEVELVDMFGSPDNVTAPYFMSAMNFLQYGNDL 78 (663) Q Consensus 1 ~~-~~~PGVyveEv~~~~~-i~~v~Ts~~afvG~~~~Gpv~~p~~i~s~~e~~~~FG~~~~~~~~~~~~~~~F~nGG~~~ 78 (663) |- |++|||||||.+++.+ +++++|++++|||.+++||+++|++|+||.||++.||+-+-..+..+|...||.|||++| T Consensus 8 ~~~~~~Pgv~~~~~~s~~~~~~~~~~~~~~~iG~a~~G~~~~~~~~~~~~~~~~~fg~g~l~~~i~~a~~~~~~~g~~~~ 87 (562) T protein:vir:63 8 RKPVSRPHTEISVDTSGIGGSSSGSEKILCLVGSATGGKPNAVYKVRNYSQAKSVFRSGELLDAIERAWNPGEGTGAGDI 87 (562) T ss_pred CCcccCCceEEEEecCCCcccCCCCCceEEEEEEeCCCCCceeEEEccHHHHHHHhcCCchHHHHHHhccccccCCceEE Confidence 44 7899999999999886 899999999999999999999999999999999999884433333444555668999999 Q ss_pred EEEEeccccccccccccccceeeeeccccccccccccccccccccccccceeeeeeecccceeeeeecccchhccccccc Q lcl|Aclame:pro 79 RLVRVIDMEKAKNASPLVNQVSVTITTEGQGYTVGDAITVKYNNATITEAGKVTAVDSDGKIKSLFVPTAEIIAKTRQLG 158 (663) Q Consensus 79 ~vvRv~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~v~~~~~~g~~~~~~~~~~~~~~~~~~~~ 158 (663) |+|||.+ ++.+....+.+.++....| ++++.+++..........-+.......+...... +.+....... T Consensus 88 ~~~rv~~---a~~a~~~~~~~~~~a~~~g---~~~n~i~v~~~~~~~~~~~~~~v~~~~~~~~ev~----~~~g~V~~i~ 157 (562) T protein:vir:63 88 LAMRVEE---AKEATFEAEGVKVSSTIYG---ADANDIQVALEDNTITGTKRLSIVFAKERVNQVY----DNLGSIFSIK 157 (562) T ss_pred EEEEcCC---CccceeEecceeEEEeecc---cCCCeEEEEEecCCCCCCcceEEEecCCCcchhh----hhccceeeee Confidence 9999943 2233333445555665555 3666666655433322222222111111100000 0000000000 Q ss_pred ccccce-eceeeeeccccc-ceeeeeecccccccccccccccccccccccccccccccccccccceeeecchhhcccccc Q lcl|Aclame:pro 159 TYPTLG-DNWRIDVSGASG-GSAAALALGNIVVDSGVTFGNSEDAPAVMTSPAVMEKYAKFGMPLISAVYPGEIGSTVEV 236 (663) Q Consensus 159 t~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~g~~g~~v~v 236 (663) ...... ............ ........+.-... ...+...... ............+.+.+.+++..++.+++ T Consensus 158 y~g~~~~~~~~v~~~~~~~~a~~l~~~~g~~~v~-~~~L~~g~~~------~~~~l~~~in~~~~~~aky~~~~gn~i~~ 230 (562) T protein:vir:63 158 YKGTEASATFTVAVDPVTFKATKLTLKAGDKTVK-EYDLGSGAYA------ETNVLISDINNLPDFEAKFFPIGDKNLTT 230 (562) T ss_pred eecccccceEEEEecCcceeEEEEEeecCCccee-EEEecCCccc------hhHHHHHhhccccceEEEeeccCCceeee Confidence 000000 000000000000 00000000000000 0000000000 00000000011122334444444444333 Q ss_pred ccccccccccccccceecccceecccceeEEEecccccccceeeeccCCcceeeEeeeecccccccccchhhhhhhhcCC Q lcl|Aclame:pro 237 EIVSKTAFNSGAQQTIYPFGGTRTSNARGVIQYGPMTDDQFAIIVRRDGIVVESTVLSTRKGDRDVYGSNIFMDDYFRNG 316 (663) Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (663) ....... .. .+........ ....+....+. T Consensus 231 ~~~d~~~-----~~-----------------------------~vkt~~~~v~----------------t~~~d~~~~~~ 260 (562) T protein:vir:63 231 DNFDAQI-----DV-----------------------------DIKTKEAYVK----------------AVGGDIEKQTA 260 (562) T ss_pred ecccccc-----cc-----------------------------chhhhhhhhh----------------hhhhhhhhccc Confidence 2111000 00 0000000000 00000000011 Q ss_pred CceEEEEeecccC-CccceeEEecCcccccccccchhhhHHHHHhhhhccccceeEEeeccCcCChhHHHHHHHHHHHHH Q lcl|Aclame:pro 317 GSNFIFASSEGWP-AGFTGIIQLGGGTSANADVGADELIKGWDLFSDREALHVNLMIAGACGSDGAEIASTVQKYVVSLA 395 (663) Q Consensus 317 ~s~~v~~~~~~~~-~~~~~~~~l~gg~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 395 (663) ...++........ ........|.||.++..+ .++..+++.|+..+ ...+++. .++ .+++.++.+|| T Consensus 261 ~~~~v~~~~~~~~~la~~~~~~LtGG~dGt~~---~~~~~al~ale~~~---~~~i~~~---t~d----~av~~~l~a~v 327 (562) T protein:vir:63 261 YNGYVDFEFDRSKEIANFPLTKLTGGDNGTIP---ESWADKFSYFANEG---GYYLVPL---TSK----QAVHAEALQFV 327 (562) T ss_pred ccceeeeeeccccceecccceeeecCCCCCch---hhHHHHHHHHHhCC---cEEEEec---CCC----HHHHHHHHHHH Confidence 1222222211111 111234578899887643 34566666666543 2333322 112 23567788888 Q ss_pred HhhCC----eEEEecccccccccccccccHHHHHHHHhhcccccchhhhccCcCcceEEEecCceeecccccCceeEech Q lcl|Aclame:pro 396 DDRQD----CVAIVNPPAELMVGIPTSTAVKNIVEWRNGMTGSGEVVDNNMNISSTYAFIIGNYKYQYDKYNDINRWVPL 471 (663) Q Consensus 396 ~~~~~----~~~i~d~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~p~~~~~d~~~~~~~~~p~ 471 (663) +++++ ++++++.+.+ .+.+++..+.. .+++++.++++||....+. ++..+..|+ T Consensus 328 kr~~~~g~~~~aVlg~~~~--------~~~~~~~~~a~-------------~~n~ervv~v~~~~~~~~~-~~~~~~~~~ 385 (562) T protein:vir:63 328 RDCSYNGNPMRVFVGGGIG--------ESMEQLFTRAI-------------GLQNERAGLIGFSGTVKMD-DGRSLKMPG 385 (562) T ss_pred HHHHhCCCcEEEEecCCCC--------CCHHHHHHHhh-------------hcCCCcEEEEecCeeEECC-CCceeeech Confidence 77665 8999987643 34555555443 3678999999999876654 456666777 Q ss_pred ---HHHHHHHHHhhhhccCceecccceecceeecceeeeeecChhhhhhhhhCCceEEEEeeCCCcEEEEcc-eec---- Q lcl|Aclame:pro 472 ---AADIAGLCAYTDQVSHPWMSPAGYRRGQIRNCIKLAIEPKQSMRDTMYQVAINPVTGFAGGDGFVLFGD-KMA---- 543 (663) Q Consensus 472 ---s~~~AG~~a~~d~~~g~~~span~~~~~i~~~~~~~~~~~~~~~~~Ln~~~in~i~~~~~~~G~~~wG~-rT~---- 543 (663) ++++||++|..| +++||.|+.+. ..++...+++.|++.|+++|+++++...+ ++.++|.. +++ T Consensus 386 ~~~aa~vAGl~A~~~----~~~SlT~~~i~----~~~v~~~~t~~e~~~li~~Gv~~l~~~~~-~~v~~~~iv~~itT~t 456 (562) T protein:vir:63 386 YMFAAQVAGLTCGLE----IGEAITFKNIA----IETLDTIYEGSQLDQLNESGIITAEFVRN-RAVTNFRIVDDVTTFN 456 (562) T ss_pred hHHHHHHHHHhhcCc----hhcCccceeec----cccccccCCHHHHHHHHhCCeEEEEEecC-CcEEEEEeeccceecC Confidence 789999999887 88999999753 34677889999999999999999988765 45556643 332 Q ss_pred CCCCccceeeehhhHHHHHHHHHHHHH-HHhhcccCCHHHHHHHHHHHHHHHHHHHhcCceEEEEEEEccCCCCHHHhhC Q lcl|Aclame:pro 544 TQVPSPFDRINVRRLFNMLKKNIGDTS-KYELFENNDAFTRQSFRMETSQYLDGIRSLGGCYDFRVVCDTTNNTPNVIDR 622 (663) Q Consensus 544 ~~~~~~~~~i~vrR~~~~i~~~~~~~~-~~~v~epn~~~~~~~v~~~i~~~L~~l~~~gal~g~~v~~d~~~nt~~~i~~ 622 (663) ..++..|++++++|++|+|++.|++.. +||++|||+...|.+|+..|..||.+||+.|+|.+|... +-+..+.+ T Consensus 457 ~~~~~~~~ki~viRv~D~i~~dir~~~~~~yiGk~Nn~~~r~~v~~~i~~~L~~l~~~gaI~~~~~~-----dv~v~~~~ 531 (562) T protein:vir:63 457 DKTDPVKSEIGVGEANDFLVSELKISLDNEYIGTKIIDTSASLVKNFVQSFLDRKKLAKEIQDYSPE-----EVQVVIEG 531 (562) T ss_pred CCCCchhhhhhhhHHHHHHHHHHHHHHHhcCCccccChHHHHHHHHHHHHHHHHHHhCCcccCCCcc-----ceEEEecC Confidence 223458999999999999999998876 599999999999999999999999999999999998531 12223566 Q ss_pred CEEEEEEEEEecCcceEEEEEEEEeecccch Q lcl|Aclame:pro 623 NEFVGTIYVKPPRSINYITLNMVATSTGANF 653 (663) Q Consensus 623 G~~~~~i~~~p~~p~e~i~~~~~~~~~~~~~ 653 (663) ++++|++.++|+.|+|+|++++.......+- T Consensus 532 d~~~v~~~v~pv~~mekIy~ti~~~~~~~~~ 562 (562) T protein:vir:63 532 DVARISLTVFPIRSMKKIEVSLVYRQQILTA 562 (562) T ss_pred CEEEEEEEEEEcccceEEEEEEEEeeeeecC Confidence 8899999999999999999999977664443 No 35 >protein:vir:80488 Length: 562 # NCBI annotation: Tsh # Family: family:all:2449 # MgeID: mge:1883 # MgeName: A511 # Cross-refs: genbank:acc:YP_001468473;genbank:gi:157325048;genbank:GeneID:5601446 Probab=100.00 E-value=1.2e-64 Score=371.10 Aligned_cols=538 Identities=14% Similarity=0.080 Sum_probs=316.1 Q ss_pred Cc--------eecCceEEEEecCCCc-ccccCCCceEEEeecccCCCCcceEeCCHHHHHHHcCCcCCCchhHHHHHHHH Q lcl|Aclame:pro 1 MA--------LLSPGIEMKETSINST-VVRSATGRAAIVGKFAWGPAYEVRQVTNEVELVDMFGSPDNVTAPYFMSAMNF 71 (663) Q Consensus 1 ~~--------~~~PGVyveEv~~~~~-i~~v~Ts~~afvG~~~~Gpv~~p~~i~s~~e~~~~FG~~~~~~~~~~~~~~~F 71 (663) |+ +..|||||||.+++.+ +++++|++++|||.+++||+++|++|+||.||++.||+-.-..+..+|...|| T Consensus 1 ~~~~~~~~~~~~~pgv~~~~~~s~~~~~~~~~~~~~~~ig~a~~G~~~~~~~~~~~~~~~~~f~~g~l~~~i~~a~~~~~ 80 (562) T protein:vir:80 1 MAIEIYPRKPVSRPHTEISVDTSGIGGSSSGSEKILCLVGSATGGKPNAVYKVRNYSQAKSVFRSGELLDAIERAWNPGE 80 (562) T ss_pred CeeeeeCCCcccCCceEEEEecCCcccCCCCCCceEEEEEEeCCCCcceeEEEccHHHHHHHhcCCChHHHHHHhccccc Confidence 43 5789999999999886 89999999999999999999999999999999999988543344445666677 Q ss_pred hcCCceEEEEEeccccccccccccccceeeeeccccccccccccccccccccccccceeeeeeecccceeeeeecccchh Q lcl|Aclame:pro 72 LQYGNDLRLVRVIDMEKAKNASPLVNQVSVTITTEGQGYTVGDAITVKYNNATITEAGKVTAVDSDGKIKSLFVPTAEII 151 (663) Q Consensus 72 ~nGG~~~~vvRv~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~v~~~~~~g~~~~~~~~~~~~~ 151 (663) .|||++||+|||... +.+....+.+.++....| ++++.+.+....++.....+.......+.......--+... T Consensus 81 ~~g~~~~~~~rv~~a---~~a~~~~~~~~~~~~~~g---~~~n~i~v~~~~~~~~~~~~~~v~~~~~~~~ev~~~~g~v~ 154 (562) T protein:vir:80 81 GTGAGDILAMRVEEA---KEATFEAEGVKVSSTIYG---ADANDIQVALEDNTITGTKRLSIVFAKERVNQVYDNLGSIF 154 (562) T ss_pred ccCceEEEEEEcCCC---CcceEEecceEEEEeecc---cCCCceEEEEecCCCCCCcceEEEecCCcceEEeeccCcee Confidence 899999999999543 223333445566665554 35666666554333332222222211111111111101100 Q ss_pred cccccccccccceeceeeeecccccc-eeeeeecccccccccccccccccccccccccccccccccccccceeeecchhh Q lcl|Aclame:pro 152 AKTRQLGTYPTLGDNWRIDVSGASGG-SAAALALGNIVVDSGVTFGNSEDAPAVMTSPAVMEKYAKFGMPLISAVYPGEI 230 (663) Q Consensus 152 ~~~~~~~t~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~g~~ 230 (663) ......... .............. .......+..... ...++...... .............+.+.+++.. T Consensus 155 ~i~y~g~~~---~a~~~i~~~~~~~~a~~l~~~~g~~~v~-~~~l~~g~~~~------~~~l~~~i~~~~~~tAky~g~~ 224 (562) T protein:vir:80 155 SIKYKGTEA---SATFTVAVDPVTFKATKLTLKAGDKTVK-EYDLGSGAYAE------TNVLISDINNLPDFEAKFFPIG 224 (562) T ss_pred eeeeccccc---cceeEEEecCccceEEEEEEecCCccee-EEEeCCCccch------hhhhhhhhccccceEEEecccC Confidence 000000000 00000000000000 0000000000000 00000000000 0000000111223444444444 Q ss_pred ccccccccccccccccccccceecccceecccceeEEEecccccccceeeeccCCcceeeEeeeecccccccccchhhhh Q lcl|Aclame:pro 231 GSTVEVEIVSKTAFNSGAQQTIYPFGGTRTSNARGVIQYGPMTDDQFAIIVRRDGIVVESTVLSTRKGDRDVYGSNIFMD 310 (663) Q Consensus 231 g~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (663) ++.+++........ .+ . .. ....+....+ +. T Consensus 225 ~n~i~~~~~d~~~~-----~~---------------------------~--kt-----~~~~v~~~~~--d~-------- 255 (562) T protein:vir:80 225 DKNLTTDNFDAQID-----VD---------------------------I--KT-----KEAYVKAVGG--DI-------- 255 (562) T ss_pred Cceeeecccccchh-----hh---------------------------c--cc-----ceeeeeehhh--hh-------- Confidence 44443321110000 00 0 00 0000000000 00 Q ss_pred hhhcCCCceEEEEeeccc-CCccceeEEecCcccccccccchhhhHHHHHhhhhccccceeEEeeccCcCChhHHHHHHH Q lcl|Aclame:pro 311 DYFRNGGSNFIFASSEGW-PAGFTGIIQLGGGTSANADVGADELIKGWDLFSDREALHVNLMIAGACGSDGAEIASTVQK 389 (663) Q Consensus 311 ~~~~~~~s~~v~~~~~~~-~~~~~~~~~l~gg~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 389 (663) ...+....++....... .........|.||.++... .++..+++.|+..+ ...+++.. .+ .+++. T Consensus 256 -~~~~~~n~~v~~~~~~~~~la~~~~~~LtGG~dG~~~---~~~~dal~~Le~~~---~~~i~~~t---~d----~ai~~ 321 (562) T protein:vir:80 256 -EKQTAYNGYVEFEFDRSKEIANFPLTKLTGGDNGTIP---ESWADKFSYFANEG---GYYLVPLT---SK----QAVHA 321 (562) T ss_pred -hhcccccceEEEEeccCccccccceeeeeCCCCCCcc---ccHHHHHHHHHhCC---cEEEEecC---CC----hHHHH Confidence 00011122222222111 1112234578899987643 34556666666543 23333321 11 33677 Q ss_pred HHHHHHHhhCC----eEEEecccccccccccccccHHHHHHHHhhcccccchhhhccCcCcceEEEecCceeecccccCc Q lcl|Aclame:pro 390 YVVSLADDRQD----CVAIVNPPAELMVGIPTSTAVKNIVEWRNGMTGSGEVVDNNMNISSTYAFIIGNYKYQYDKYNDI 465 (663) Q Consensus 390 ~~~~~~~~~~~----~~~i~d~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~p~~~~~d~~~~~ 465 (663) .+.+||+++++ ++++++.+.+ .+.++++.... .+++++.++++||..+.+. ++. T Consensus 322 ~~~a~vkr~r~~g~~~~aVvg~~~~--------~~~~~~~~~a~-------------~~n~e~vv~v~~~~~~~~~-~~~ 379 (562) T protein:vir:80 322 EALQFVRDCSYNGNPMRVFVGGGIG--------ESMEQLFTRAI-------------GLQNERAGLIGFSGTVKMD-DGR 379 (562) T ss_pred HHHHHHHHHHhCCCeEEEEecCCCC--------CCHHHHHHHhh-------------hcCCCeEEEEecCeeEECC-CCc Confidence 88899988765 8999987643 34566655543 3678899999998876654 455 Q ss_pred eeEech---HHHHHHHHHhhhhccCceecccceecceeecceeeeeecChhhhhhhhhCCceEEEEeeCCCcEEEE---- Q lcl|Aclame:pro 466 NRWVPL---AADIAGLCAYTDQVSHPWMSPAGYRRGQIRNCIKLAIEPKQSMRDTMYQVAINPVTGFAGGDGFVLF---- 538 (663) Q Consensus 466 ~~~~p~---s~~~AG~~a~~d~~~g~~~span~~~~~i~~~~~~~~~~~~~~~~~Ln~~~in~i~~~~~~~G~~~w---- 538 (663) .+..|| ++++||++|+.| +++||.|+.+. + .++...+++.|++.|+++|+++++...+ ++.++| T Consensus 380 ~~~~~~~~~aa~vAGl~Ag~~----~~~S~T~~~i~---~-~~v~~~lt~~e~~~li~~G~l~l~~~~~-~~v~~~riv~ 450 (562) T protein:vir:80 380 SLKMPGYMFAAQVAGLTCGLE----IGEAITFKNIA---I-ETLDTIYEGSQLDQLNESGIITAEFVRN-RAVTNFRIVD 450 (562) T ss_pred eeeechhHHHHHHHHHHhcCc----cccCccceeec---c-ccccccCCHHHHHHHHhCCeEEEEEecC-CcEEEEEeec Confidence 566666 889999999987 78899999753 3 3567789999999999999999988765 455555 Q ss_pred cceec-CCCCccceeeehhhHHHHHHHHHHHHH-HHhhcccCCHHHHHHHHHHHHHHHHHHHhcCceEEEEEEEccCCCC Q lcl|Aclame:pro 539 GDKMA-TQVPSPFDRINVRRLFNMLKKNIGDTS-KYELFENNDAFTRQSFRMETSQYLDGIRSLGGCYDFRVVCDTTNNT 616 (663) Q Consensus 539 G~rT~-~~~~~~~~~i~vrR~~~~i~~~~~~~~-~~~v~epn~~~~~~~v~~~i~~~L~~l~~~gal~g~~v~~d~~~nt 616 (663) +-.|. ..++..|++++++|++|+|++.|++.. +||++|||+...|.+|+..|..||.+||+.|+|.+|... +- T Consensus 451 ~itT~t~~~~~~~~ki~viRv~D~i~~dir~~~~~~yIGk~Nn~~~r~~v~~~i~~~L~~l~~~gaI~~~~~~-----dv 525 (562) T protein:vir:80 451 DVTTFNDKTDPVKSEIGVGEANDFLVSELKISLDNEYIGTKIIDTSASLVKNFVQSFLDRKKLAKEIQDYSPE-----EV 525 (562) T ss_pred cceeccCCCCchhhhhhhhHHHHHHHHHHHHHHHhcCCccccChHHHHHHHHHHHHHHHHHHhCCcccCCCcc-----ce Confidence 22333 233468999999999999999998887 689999999999999999999999999999999998531 12 Q ss_pred HHHhhCCEEEEEEEEEecCcceEEEEEEEEeecccch Q lcl|Aclame:pro 617 PNVIDRNEFVGTIYVKPPRSINYITLNMVATSTGANF 653 (663) Q Consensus 617 ~~~i~~G~~~~~i~~~p~~p~e~i~~~~~~~~~~~~~ 653 (663) +-++.+++++|++.++|+.|+|||++++.......+- T Consensus 526 ~v~~~~d~~~v~~~v~Pv~~mekIy~ti~~~~~~~~~ 562 (562) T protein:vir:80 526 QVVIEGDIARISLTVFPIRSMKKIEVSLVYRQQILTA 562 (562) T ss_pred EEEecCCEEEEEEEEEEcccceEEEEEEEEEeeeecC Confidence 2335678899999999999999999999977664443 No 36 >protein:vir:102819 Length: 648 # NCBI annotation: tail sheath protein # Family: family:all:2449 # MgeID: mge:1610 # MgeName: YS40 # Cross-refs: genbank:acc:YP_874082;genbank:gi:118197689;genbank:GeneID:4496011 Probab=100.00 E-value=2e-64 Score=369.84 Aligned_cols=585 Identities=12% Similarity=0.023 Sum_probs=291.2 Q ss_pred Cce---------ecCceEEEEecCCC-cccccCCCceEEEeecccCCCCcceEeCCHHHHHHHcCCcCCCchhHHHHHHH Q lcl|Aclame:pro 1 MAL---------LSPGIEMKETSINS-TVVRSATGRAAIVGKFAWGPAYEVRQVTNEVELVDMFGSPDNVTAPYFMSAMN 70 (663) Q Consensus 1 ~~~---------~~PGVyveEv~~~~-~i~~v~Ts~~afvG~~~~Gpv~~p~~i~s~~e~~~~FG~~~~~~~~~~~~~~~ 70 (663) |+. .+|||||||+|++. +|+||+|++++|||.++|||+|+|++|+||.||++.||+ .++.|++++| T Consensus 1 ma~~~yf~~~~~~~PGVyvee~~sg~~~i~gv~tsva~fvG~a~~Gp~~~p~~v~s~~~~~~~fgg----g~l~~av~~~ 76 (648) T protein:vir:10 1 MAISVYFDGKLIKQLGAYVKTDLSAVKQINGVGTGIVALLGLAEGGETYKPYRLTSFAEAVSIFKG----GPLLEHIKAA 76 (648) T ss_pred CeeeeeeCCCCccCCceEEEEeccccccccCCCCceEEEEEeeCCCCCceeEEecCHHHHHHHhcC----ccHHHHHHHH Confidence 763 33999999999987 599999999999999999999999999999999999996 4699999999 Q ss_pred HhcCCceEEEEEeccccccccccccccceeeeecccccccccccccc--ccccccccccceeeeeeecccceeeeeeccc Q lcl|Aclame:pro 71 FLQYGNDLRLVRVIDMEKAKNASPLVNQVSVTITTEGQGYTVGDAIT--VKYNNATITEAGKVTAVDSDGKIKSLFVPTA 148 (663) Q Consensus 71 F~nGG~~~~vvRv~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~i~--v~~~~~~~~~~~~v~~~~~~g~~~~~~~~~~ 148 (663) |+|||++||+|||.+...+ ....+.+.++...++ .+++.+. +....+......++........... +...+ T Consensus 77 F~nGg~~~~~vRv~~~~~a---~~~~~~~~~~a~~~g---~~gn~i~~~v~~~~~~~~~~~~l~v~~~~~~~~~-d~~v~ 149 (648) T protein:vir:10 77 FIGGAGEVVAVRIGNPTTA---SVSIPVAQNTSDTSP---ANLNFVSYEASTRSNQIYVSFDLDENFTSANEAD-DTIIF 149 (648) T ss_pred HhCCCcEEEEEEcCCCccc---ceecceeEEeecccC---CCCCceEEEEEEcCCCcCceeEEEEEecCCCccc-ceeEE Confidence 9999999999999765432 222334445555444 2455443 3222333333333332222111000 00000 Q ss_pred chhcccccccccccceeceeeeeccc-----ccceeeeeeccccccccccccccccccccccccccccccccccccccee Q lcl|Aclame:pro 149 EIIAKTRQLGTYPTLGDNWRIDVSGA-----SGGSAAALALGNIVVDSGVTFGNSEDAPAVMTSPAVMEKYAKFGMPLIS 223 (663) Q Consensus 149 ~~~~~~~~~~t~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (663) .. ......+.............. .+.............. ..... ......... T Consensus 150 ~i---~~~~~~y~gt~~~~t~~v~~~~~~~~~~~~~~~~~~~~~~v~-----------------~~~~~--~~~~~~~~v 207 (648) T protein:vir:10 150 TI---YQKHPDFSVTRETFTFPRKFTTPTVLVKRGSTLFFVDRSIVN-----------------AALAA--GPAFQTALI 207 (648) T ss_pred Ee---ccCCCcccccceeccccccccccccccccccceeecCccchh-----------------hhhcc--Cccchhhhh Confidence 00 000000000000000000000 0000000000000000 00000 000000000 Q ss_pred eecchhhccccccccccccccccccccceecccceecccceeEEEecccccccceeeeccCCcc------eeeEeeeecc Q lcl|Aclame:pro 224 AVYPGEIGSTVEVEIVSKTAFNSGAQQTIYPFGGTRTSNARGVIQYGPMTDDQFAIIVRRDGIV------VESTVLSTRK 297 (663) Q Consensus 224 a~~~g~~g~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~------~~~~~~~~~~ 297 (663) ............+......... ........ ....+.............+....+.+ .....+...+ T Consensus 208 ~~~~~~~~~~~~~~~~~~s~~~-~~d~~~~~-------~~~~a~~~~~~~~~~~~~~~~~~gd~~~~~~~~~~~~~~~tp 279 (648) T protein:vir:10 208 NLLKEQLQPTDVVQIFDASDTN-PVDIPLGL-------FVYEVLYGGLFGFTKSRLVKTSFGTVDDLLSNPLLFNLSATP 279 (648) T ss_pred hchhhhhhhhhhheeccccccc-cccccccc-------ccccccchhhhcCCcchhhhhhhccccccccccceecccccc Confidence 0000000000000000000000 00000000 00000000000000000000000000 0000000000 Q ss_pred cccccccch-------hhhhhhhcCCCceEEEEeecccCCccceeEEecCcccccccc---------cchhhhHHHHHhh Q lcl|Aclame:pro 298 GDRDVYGSN-------IFMDDYFRNGGSNFIFASSEGWPAGFTGIIQLGGGTSANADV---------GADELIKGWDLFS 361 (663) Q Consensus 298 ~~~~~~~~~-------~~~~~~~~~~~s~~v~~~~~~~~~~~~~~~~l~gg~d~~~~~---------~~~~~~~~~~~~~ 361 (663) ......... .....+.....+.++......... ......|.||+++..+. ...++..++..++ T Consensus 280 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~l~~~~~~p~~~-~~~~t~L~GGtdG~~p~s~~~~~~~~~~~d~~d~l~~~~ 358 (648) T protein:vir:10 280 FFDGSDYQDYTSLSDPANWFAKDAYTINHLVDTTINPHIL-ATRIFSLSGGTNGDDGTGYYQTAVSNYINIWSQGLATLE 358 (648) T ss_pred cccccceeeeeccccccceeeeeccchhhcccccccCccc-ccccceecccccCCCcccccccccccchhhHHHHhhhcc Confidence 000000000 000000000011111111111110 11134688999887652 4567888888887 Q ss_pred hhcccccee---EEeeccCcCChhHHHHHHHHHHHHHHhhC---------CeEEEecccccccccccccccHHHHHHHHh Q lcl|Aclame:pro 362 DREALHVNL---MIAGACGSDGAEIASTVQKYVVSLADDRQ---------DCVAIVNPPAELMVGIPTSTAVKNIVEWRN 429 (663) Q Consensus 362 ~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~i~d~p~~~~~~~~~~~~~~~~~~~~~ 429 (663) ..+.+.+.. +.+.....+......+++..+++||.++. ..++++.++.+. ...+...-+. T Consensus 359 ~~~~~~ivp~~~~~~~~~~~~~lt~~q~i~a~a~shv~~~s~~~~~~~r~~~~~~vg~~~~e--------s~~~se~~~~ 430 (648) T protein:vir:10 359 EEEVNFVIPAYKFTNVTQLNDRLTIFKGIASTFLSHVQTMSQVNRRKARVGVFGLPAPSPNE--------SVTASEYLYN 430 (648) T ss_pred CCCceEEEeecccccccccccccCCccchHHHHHHHHHHhhhccccccccCeEEEeCCCCch--------hHHHHHHHhh Confidence 776543211 11111212222233556777788886542 125554443221 1111111111 Q ss_pred hcccccchhhhccCcCcceEEEecCceeecccccCceeEech---HHHHHHHHHhhhhccCceecccceecceeecceee Q lcl|Aclame:pro 430 GMTGSGEVVDNNMNISSTYAFIIGNYKYQYDKYNDINRWVPL---AADIAGLCAYTDQVSHPWMSPAGYRRGQIRNCIKL 506 (663) Q Consensus 430 ~~~~~~~~~~~~~~~~s~~~~~~~p~~~~~d~~~~~~~~~p~---s~~~AG~~a~~d~~~g~~~span~~~~~i~~~~~~ 506 (663) ....+.........-..+.+...+.+....+ +++..++|| ++++||+++++. ++.||.||++.++ + +.. T Consensus 431 ~~~~~~~~a~~~~~d~~~~~~~~~~~~~~~~--~G~~~~~p~~~~Aa~VAGl~a~l~----~~~s~T~k~i~~~-~-id~ 502 (648) T protein:vir:10 431 RNILNTISAMFGGTDRAQAVVFPFYSNVFND--EGKVELLGGEFFASYVAGMHANRE----PQDSITFLPISGI-G-AEP 502 (648) T ss_pred hhcccccceeeeecCCceEEeecccceeECC--CCcEEecchhhHHHHHHhhhhccc----cccCcccceeecc-c-ccc Confidence 1100000000000011223333334433332 567778898 788999999864 8889999986532 3 333 Q ss_pred eeecChhhhhhhhhCCceEEEEeeCCC---cEEEEcceec--CCCCccceeeehhhHHHHHHHHHHH-HHHHhhcccCCH Q lcl|Aclame:pro 507 AIEPKQSMRDTMYQVAINPVTGFAGGD---GFVLFGDKMA--TQVPSPFDRINVRRLFNMLKKNIGD-TSKYELFENNDA 580 (663) Q Consensus 507 ~~~~~~~~~~~Ln~~~in~i~~~~~~~---G~~~wG~rT~--~~~~~~~~~i~vrR~~~~i~~~~~~-~~~~~v~epn~~ 580 (663) .+.++++|++.|++.||+||+...+.. ++++--+-|. +.++..|+.++++|++||+.+.|++ ...+|+++||+. T Consensus 503 ~~~~t~~qld~L~~~Gv~~ie~~~~~~~~~~~rvv~gITT~~~~~~~~~~eisv~ri~D~l~~~vr~~l~~~fIG~~n~~ 582 (648) T protein:vir:10 503 LYNWTYTQKDDLISNRVLFVEKVKTSFGGIVYRIHHNPTTWLGPVTQGFQEFVLRRIDDFLQSYVYKNLQEQFIGRKSYG 582 (648) T ss_pred ccCCCHHHHHHHhcCCcEEEEEecCCcceeeEEEeccceeecCCCCcceeeeeeeehhhHHHHHHHHHHhhhcCcccccH Confidence 478999999999999999999876532 3444434333 2234579999999999999999987 555999999999 Q ss_pred HHHHHHHHHHHHHHHHHHhcCceEEEE---EEEccCCCCHHHhhCCEEEEEEEEEecCcceEEEEEEEEeeccc Q lcl|Aclame:pro 581 FTRQSFRMETSQYLDGIRSLGGCYDFR---VVCDTTNNTPNVIDRNEFVGTIYVKPPRSINYITLNMVATSTGA 651 (663) Q Consensus 581 ~~~~~v~~~i~~~L~~l~~~gal~g~~---v~~d~~~nt~~~i~~G~~~~~i~~~p~~p~e~i~~~~~~~~~~~ 651 (663) ..|.++|+.|.+||.++++.++|++|. |..+ +++++++|++.++|++|++||.+++..+-.-. T Consensus 583 ~~~~~ik~~i~~~L~~~~~~~~I~~y~~~~v~~~--------~~~~vv~V~~~v~Pv~~i~~I~vti~it~~~~ 648 (648) T protein:vir:10 583 RKTENDIKVYTEALLSNLVGKQIVAYKDVKVTSN--------EDKTVYYVEFFYQPVTEIKFILVTMKVTFDLE 648 (648) T ss_pred HHHHHHHHHHHHHHhhHhhcCcccCcccceEEEE--------ecCCEEEEEEEEEecceeeEEEEEEEEEeccC Confidence 999999999999999999999999974 4333 34689999999999999999999998764321 No 37 >protein:vir:79798 Length: 717 # NCBI annotation: tail sheath subunit # Family: family:all:12069 # MgeID: mge:1874 # MgeName: 0305phi8-36 # Cross-refs: genbank:acc:YP_001429630;genbank:gi:156564120;genbank:GeneID:5525563 Probab=100.00 E-value=8.6e-62 Score=355.36 Aligned_cols=615 Identities=13% Similarity=0.094 Sum_probs=291.8 Q ss_pred Cc----e-ecCceEEEEecC----CCcccccCCCceEEEeecccCCCCcceEeCCHHHHHHHcCCcCCCch------hHH Q lcl|Aclame:pro 1 MA----L-LSPGIEMKETSI----NSTVVRSATGRAAIVGKFAWGPAYEVRQVTNEVELVDMFGSPDNVTA------PYF 65 (663) Q Consensus 1 ~~----~-~~PGVyveEv~~----~~~i~~v~Ts~~afvG~~~~Gpv~~p~~i~s~~e~~~~FG~~~~~~~------~~~ 65 (663) |. | --||+-+.=.|. +..+....|--.-+.|.+-.|||.+||+++ ...-+.+||+....+- +.. T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (717) T protein:vir:79 1 MAGFDQYQAIPGHNARFKDGNLNLKSDPNPRETESVVLLGTATDGPVMQPVRVT-PETAYNIFGKVAHENGVYNGATLLP 79 (717) T ss_pred CCchhhhhcCCCceeeeecCceecCCCCCccccceEEEEeeccCCcccCceeeC-hhHHHhhhhhhhhhcccccchhhhH Confidence 55 4 459999886652 344788889888999999999999999999 4455589997654443 223 Q ss_pred HHHHHHhcCCceEEEEEecccccccc---ccccccceeeeecccccccccccccc-cccccccccc-c--eeeeeeeccc Q lcl|Aclame:pro 66 MSAMNFLQYGNDLRLVRVIDMEKAKN---ASPLVNQVSVTITTEGQGYTVGDAIT-VKYNNATITE-A--GKVTAVDSDG 138 (663) Q Consensus 66 ~~~~~F~nGG~~~~vvRv~~~~~~~~---a~~~~~~~~~~~~~~~~~~~~~~~i~-v~~~~~~~~~-~--~~v~~~~~~g 138 (663) +.-.....|-......|+..-.+... .+-.....+...-.-|.....|+... .....++.-. . ++..++-..- T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (717) T protein:vir:79 80 KFEELWAAGNRDIRLMRTTGVNAVSSLLGTSYSKNSKEVAEDKLGGAQARGNVAATFTLPNGGIVEATFLLKARGVIIPP 159 (717) T ss_pred HHHHHHhcCCcceEEEEecchhHHHHHhhcccccchhhHHHHhhcccccccceEEEEEcCCCceeeeeeeeeecceEeCC Confidence 33445667999999999865322100 00000000000000000001111100 0001111000 0 0000000000 Q ss_pred ceeeeeecccchhcccccccccccc----------------eeceeeeecccccceeeeeeccccccccccccccccccc Q lcl|Aclame:pro 139 KIKSLFVPTAEIIAKTRQLGTYPTL----------------GDNWRIDVSGASGGSAAALALGNIVVDSGVTFGNSEDAP 202 (663) Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~t~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (663) +...++.-+.+ ....++.+.. ..+....-..+.+.... ..+.....+..+...... T Consensus 160 ~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~ 231 (717) T protein:vir:79 160 NNYTLDVGTEE----DMKAGTQPTFAQVLLNENVADMESEITVSYEFTYKDAQGETKT----SEVLDNNTDKDGKPMIAK 231 (717) T ss_pred CcceEeccChh----hhhcCCCchhhhhhhccchhhccceeEEEEEEEeecccCcchh----hhhhcCCCCCCCceeEEe Confidence 00000000000 0001111100 00000000000000000 000000000011111100 Q ss_pred ccccccccc-cccc-----cccccceeeecchhhccccccccccccccccccccceecccceec--ccceeEEEeccccc Q lcl|Aclame:pro 203 AVMTSPAVM-EKYA-----KFGMPLISAVYPGEIGSTVEVEIVSKTAFNSGAQQTIYPFGGTRT--SNARGVIQYGPMTD 274 (663) Q Consensus 203 ~~~~~~~~~-~~~~-----~~~~~~~~a~~~g~~g~~v~v~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 274 (663) +...+.... .++. .++.....++.-...+..+++...+......+.....-.+..... .-....+ +++..- T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~ 310 (717) T protein:vir:79 232 GADVTIKLEHVALAGLKLYADGIEVVDAKAFTVAGDQLTIHSNSKMKLGASLEAQYAYNLVEVIQPVIELESI-FGGGVY 310 (717) T ss_pred cccceeehhhhhhhhhHHhhcchhhhhhhheeeecceEEEEecCCcccchhhHHHHHhhHHHhhccceEEeec-ccCcee Confidence 000000000 0000 000000011111111122222111110000000000000000000 0000000 111100 Q ss_pred ccceeeeccCC-cceeeEee-eecccccccccc---------hhhhhhhhcCC-CceEEEEeecccCC-------cccee Q lcl|Aclame:pro 275 DQFAIIVRRDG-IVVESTVL-STRKGDRDVYGS---------NIFMDDYFRNG-GSNFIFASSEGWPA-------GFTGI 335 (663) Q Consensus 275 ~~~~~~~~~~g-~~~~~~~~-~~~~~~~~~~~~---------~~~~~~~~~~~-~s~~v~~~~~~~~~-------~~~~~ 335 (663) ..+.+.+...+ ...-++.. ....+....... .....+.+++. ...+.......... ..... T Consensus 311 n~~~~~v~~~D~~~~~~~t~~~~~~g~~~~~pl~~ts~dy~~~~~~vdgI~~~~~~~V~~~g~~s~a~a~~~~g~~s~d~ 390 (717) T protein:vir:79 311 NDIMRKVESKDGAVTVTITKPESKRGMISEDPLVFKSGDYTNFKMLVDAINNHPFNNVVRARTKPEFEATFTSTLQAAAD 390 (717) T ss_pred eeeeeEEecCCceEEEEEecccccCcceeccccccccCceeeeeeeecccccCchhheeeeecccccceeeeecccCchh Confidence 11111111111 11111100 000000000000 00001111111 11111110000000 00001 Q ss_pred EEecCcccccccccchhh---------------hHHHHHhhhhccccceeEEeeccCcC--ChhHHHHHHHHHHHHHHhh Q lcl|Aclame:pro 336 IQLGGGTSANADVGADEL---------------IKGWDLFSDREALHVNLMIAGACGSD--GAEIASTVQKYVVSLADDR 398 (663) Q Consensus 336 ~~l~gg~d~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 398 (663) ..+.|+.++.......-+ ..++..++ ..++++++.+....+ .......++.++++||+.+ T Consensus 391 a~f~Gg~dgl~~~~ee~Y~~lGgk~~d~g~lt~~aays~LE---~~dVDlVil~ga~adtt~ga~~d~va~alad~caal 467 (717) T protein:vir:79 391 AKFSGGKDELSLDKEEMYKRLGGEKNEEGFVTKQGAYQYLE---NYEVDYVIPLGVHADTKLIGKYDDFAYQLALACAVM 467 (717) T ss_pred hccCCCccccccchhhhhccccccccccccccchhhhhhcC---cceeEEEEecCccccccccchhhhHHHHHHHHHHHh Confidence 123334333222111100 12333333 335677666654332 2234455678899999754 Q ss_pred ----CCeEEEecc--cccccccccccccHHHHHHHHhhccccc--------------chhhhccCcCcceEEEecCceee Q lcl|Aclame:pro 399 ----QDCVAIVNP--PAELMVGIPTSTAVKNIVEWRNGMTGSG--------------EVVDNNMNISSTYAFIIGNYKYQ 458 (663) Q Consensus 399 ----~~~~~i~d~--p~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~s~~~~~~~p~~~~ 458 (663) +.++.+++. |.+. ..+.+.+|+..+.... ........+ +.|..+++++..+ T Consensus 468 Sal~r~ai~VI~l~sp~D~--------~~AtVe~~~~kLs~~Aaa~~~~d~~~a~a~~~~~~~idi-s~y~~vv~~~~~i 538 (717) T protein:vir:79 468 SHYNSVTIGIIPTTTPSDI--------SLAGVEEHVKKLENYANEFYMRDRFGNIIFDADRNKIDL-GQFIEVVAGPDFI 538 (717) T ss_pred hhccccceeeecccccccc--------chhhHHHHHHHHHhhhhhhhhhcchhccccccccccccc-cceeeeeecceeE Confidence 235555543 2221 1122223332221100 000001112 3345444444444 Q ss_pred cccccCceeEechHHHHHHHHHhhhhccCceecccceecceeecceeeeeecChhhhhhhhhCCceEEEEeeCCCcEEEE Q lcl|Aclame:pro 459 YDKYNDINRWVPLAADIAGLCAYTDQVSHPWMSPAGYRRGQIRNCIKLAIEPKQSMRDTMYQVAINPVTGFAGGDGFVLF 538 (663) Q Consensus 459 ~d~~~~~~~~~p~s~~~AG~~a~~d~~~g~~~span~~~~~i~~~~~~~~~~~~~~~~~Ln~~~in~i~~~~~~~G~~~w 538 (663) ..+..+..+..||+|++||+ |..+||||||+|++ |.|+.++.+.++++|++.||++|||||+.+++ +|+++| T Consensus 539 v~~~~~~~~~~p~AG~vAGl----dA~rGVwkSPANk~---I~GVvgLa~~lT~sE~d~Ln~aGIntIr~~~G-rGirVW 610 (717) T protein:vir:79 539 VRNTRLGQMASTPDASYIGM----VSQLKTQSAPTNKP---LPSVTALRYTYSANQLNRLTKARFATFKYKQD-GSIGVV 610 (717) T ss_pred EEcCCCceeecCHHHHHHHH----HhcCCcccccccce---ecccccCcccCCHHHHHHHhhCCeEEEEEeCC-ceEEEE Confidence 45556667888887666555 55679999999996 55667788999999999999999999999987 799999 Q ss_pred cceecCCCCccceeeehhhHHHHHHHHHHHHHHHhhcccCCHHHHHHHHHHHHHHHHHHHhcCceEEEEEEEccCCCCHH Q lcl|Aclame:pro 539 GDKMATQVPSPFDRINVRRLFNMLKKNIGDTSKYELFENNDAFTRQSFRMETSQYLDGIRSLGGCYDFRVVCDTTNNTPN 618 (663) Q Consensus 539 G~rT~~~~~~~~~~i~vrR~~~~i~~~~~~~~~~~v~epn~~~~~~~v~~~i~~~L~~l~~~gal~g~~v~~d~~~nt~~ 618 (663) |+||+++++++|+||++||++++|+++|+++++|+|||||++.+|.+|+.+|++||++||++|+|.||++++ +||++ T Consensus 611 GaRTtasd~sdWryInVRRl~D~Ie~sIr~al~~yVgEPNd~~tr~~Ik~sI~afL~~L~r~GAI~Gykvdv---tnT~~ 687 (717) T protein:vir:79 611 DAPTSAHAGSDYTRLSTARIVKEAVNAVREVADPFIGEPNDTGNRNALTAAVDKRLSKMIENKALLGFDFRL---VVTPQ 687 (717) T ss_pred eeeecCCCCcccceeehhhhHHHHHHHHHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHhcCceecceeeE---ecChh Confidence 999999888899999999999999999999999999999999999999999999999999999999999866 89999 Q ss_pred HhhCCEEEEEEEEEecCcceEEEEEEEEee Q lcl|Aclame:pro 619 VIDRNEFVGTIYVKPPRSINYITLNMVATS 648 (663) Q Consensus 619 ~i~~G~~~~~i~~~p~~p~e~i~~~~~~~~ 648 (663) ++++|+|+|+|+++|++|+|||+|+++.+. T Consensus 688 di~~G~l~V~I~vaPv~PaEfI~ititITA 717 (717) T protein:vir:79 688 QELLGEGSIELSLEAPNELRRLTTIVSLSA 717 (717) T ss_pred HhhCCEEEEEEEEEecCcccEEEEEEEEeC Confidence 999999999999999999999999999887 No 38 >protein:vir:95741 Length: 587 # NCBI annotation: ORF011 # Family: family:all:2449 # MgeID: mge:1577 # MgeName: G1 # Cross-refs: genbank:acc:YP_240910;genbank:gi:66394960;genbank:GeneID:5132682 Probab=100.00 E-value=4.6e-62 Score=356.86 Aligned_cols=565 Identities=14% Similarity=0.087 Sum_probs=319.2 Q ss_pred Cc--------eecCceEEEEecCCCc-ccccCCCceEEEeecccCCCCcceEeCCHHHHHHHcCCcCCCchhHHHHHHHH Q lcl|Aclame:pro 1 MA--------LLSPGIEMKETSINST-VVRSATGRAAIVGKFAWGPAYEVRQVTNEVELVDMFGSPDNVTAPYFMSAMNF 71 (663) Q Consensus 1 ~~--------~~~PGVyveEv~~~~~-i~~v~Ts~~afvG~~~~Gpv~~p~~i~s~~e~~~~FG~~~~~~~~~~~~~~~F 71 (663) |+ +.+|||||||.+++.+ +++++|++++|||.++|||+++|++++||.||++.||+.+-....-++...|| T Consensus 1 ~a~~~~~~~~~~~pgv~~~~~~~~~~~~~~~~~~~~~~~g~a~~G~~~~~~~~~~~~~~~~~~~~g~l~~~~~~a~~~~~ 80 (587) T protein:vir:95 1 MAVEPFPRRPITRPHASIEVDTSGIGGSAGSSEKVFCLIGQAEGGEPNTVYELRNYSQAKRLFRSGELLDAIELAWGSNP 80 (587) T ss_pred CcccccCCcccccCceEEEEecCCccccCCCCCceEEEEEEeCCCCCceeEEeccHHHHHHHhcCcchHHHHHHHhcccc Confidence 43 6789999999999875 89999999999999999999999999999999999988542223333444455 Q ss_pred hcCCceEEEEEeccccccccccccccceeeeeccccccccccccccccccccccccceeeeeeecccceeeeeecccchh Q lcl|Aclame:pro 72 LQYGNDLRLVRVIDMEKAKNASPLVNQVSVTITTEGQGYTVGDAITVKYNNATITEAGKVTAVDSDGKIKSLFVPTAEII 151 (663) Q Consensus 72 ~nGG~~~~vvRv~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~v~~~~~~g~~~~~~~~~~~~~ 151 (663) .|||++||+|||.+... ++...+.+.+++..+| .+++.+++...........++......++......-.+... T Consensus 81 ~~g~~~~~~~rv~~~~~---a~~~~~~l~~~a~~~G---~~gN~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~ 154 (587) T protein:vir:95 81 NYTAGRILAMRIEDAKP---ASAEIGGLKITSKIYG---NVANNIQVGLEKNTLSDSLRLRVIFQDDRFNEVYDNIGNIF 154 (587) T ss_pred CCCceEEEEEEcCCCce---eEEEecCeEEEEeccc---ccccceEEEEecCCCCCceeEEEEEecccceeeeeecccee Confidence 79999999999955432 3334455777777766 47888877655433322223332222222111111111100 Q ss_pred cccccccccccceeceeeeeccccc-ceeeeeecccccccccccccccccccccccccccccccccccccceeeecchhh Q lcl|Aclame:pro 152 AKTRQLGTYPTLGDNWRIDVSGASG-GSAAALALGNIVVDSGVTFGNSEDAPAVMTSPAVMEKYAKFGMPLISAVYPGEI 230 (663) Q Consensus 152 ~~~~~~~t~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~g~~ 230 (663) ..... +.. .............. .....+..+..... ...++. + ...............+...+.+.+.. T Consensus 155 si~y~-g~~--~~~~~~v~~~~~t~~a~~~~l~~g~~~v~-~yrL~~-----g-~~~~~~~~~~~in~~~~~tAky~g~~ 224 (587) T protein:vir:95 155 TIKYK-GEE--ANATFSVEHDEETQKASRLVLKVGDQEVK-SYDLTG-----G-AYDYTNAIITDINQLPDFEAKLSPFG 224 (587) T ss_pred eeeee-ccc--cccceeeeecccceeeeeeeeecCCceEE-EEEecC-----C-chHHHHHHHHhhccccceEEEEeccc Confidence 00000 000 00000000000000 00000000000000 000000 0 00000000011123345566676666 Q ss_pred ccccccccccccccccccccceecccceecccceeEEEecccccccceeeeccCCcceeeEeeeecccccccccchhhhh Q lcl|Aclame:pro 231 GSTVEVEIVSKTAFNSGAQQTIYPFGGTRTSNARGVIQYGPMTDDQFAIIVRRDGIVVESTVLSTRKGDRDVYGSNIFMD 310 (663) Q Consensus 231 g~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (663) ++.+++...... .. ............. .......... ..+.......+...+..... T Consensus 225 ~~~i~~~~~~~~-~~--~~v~~~~~~v~a~--~~d~~~~~~~--~~~v~~~~~~g~~~~~~~~~---------------- 281 (587) T protein:vir:95 225 DKNLESSKLDKI-EN--ANIKDKAVYVKAV--FGDLEKQTAY--NGIVSFEQLNAEGEVPSNVE---------------- 281 (587) T ss_pred CceeEEeecCcc-cc--cceehhhhhhhhh--hcceeeeeec--eeeeeeecccccceeccchh---------------- Confidence 665554321100 00 0000000000000 0000000000 00000000111111110000 Q ss_pred hhhcCCCceEEEEeecccCCccceeEEecCcccccccccchhhhHHHHHhhhhccccceeEEeeccCcCChhHHHHHHHH Q lcl|Aclame:pro 311 DYFRNGGSNFIFASSEGWPAGFTGIIQLGGGTSANADVGADELIKGWDLFSDREALHVNLMIAGACGSDGAEIASTVQKY 390 (663) Q Consensus 311 ~~~~~~~s~~v~~~~~~~~~~~~~~~~l~gg~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 390 (663) ..........................|.||.|+..+ .++..+++.|+..+ ...++++ ..+ .+++.+ T Consensus 282 -~~~~~~~a~~~~~~~~~~~a~~~~t~LtGG~dG~~~---~~y~~~l~ale~~~---~~~i~~~---t~d----~~v~a~ 347 (587) T protein:vir:95 282 -VEAGEESATVTATSPIKTIEPFELTKLKGGTNGEPP---ATWADKLDKFAHEG---GYYIVPL---SSK----QSVHAE 347 (587) T ss_pred -hhhcccchheeccccccceeccceeeeecCCCCCCc---ccHHHHHHHHHhCC---cEEEEec---CCC----HHHHHH Confidence 000000000000000001111123458899887543 45677777776543 3333322 111 246778 Q ss_pred HHHHHHhhCC----eEEEecccccccccccccccHHHHHHHHhhcccccchhhhccCcCcceEEEecCceeecccccCce Q lcl|Aclame:pro 391 VVSLADDRQD----CVAIVNPPAELMVGIPTSTAVKNIVEWRNGMTGSGEVVDNNMNISSTYAFIIGNYKYQYDKYNDIN 466 (663) Q Consensus 391 ~~~~~~~~~~----~~~i~d~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~p~~~~~d~~~~~~ 466 (663) +.+||+++++ ++++++.+.+ .+.++++.... .+++.+..+++|+..+. ..++.. T Consensus 348 l~a~vk~~~~~g~~~~aVvg~~~~--------~~~~~~~~~a~-------------~~n~ervi~v~~~~~~~-~~dg~~ 405 (587) T protein:vir:95 348 VASFVKERSDAGEPMRAIVGGGFN--------ESKEQLFGRQE-------------SLSNPRVSLVANSGTFV-MDDGRK 405 (587) T ss_pred HHHHHHHHHhCCCcEEEEEcCCCC--------CCHHHHHHHHh-------------hcCCCcEEEecccceEe-cCCCce Confidence 8889987755 8999986542 35566665544 36788999999886543 234666 Q ss_pred eEech---HHHHHHHHHhhhhccCceecccceecceeecceeeeeecChhhhhhhhhCCceEEEEeeCCCc--EE-EEcc Q lcl|Aclame:pro 467 RWVPL---AADIAGLCAYTDQVSHPWMSPAGYRRGQIRNCIKLAIEPKQSMRDTMYQVAINPVTGFAGGDG--FV-LFGD 540 (663) Q Consensus 467 ~~~p~---s~~~AG~~a~~d~~~g~~~span~~~~~i~~~~~~~~~~~~~~~~~Ln~~~in~i~~~~~~~G--~~-~wG~ 540 (663) ..+|| ++++||++|..| +++||.|+++. ..++...+++.|++.|+++|+++++..++..+ ++ +.+- T Consensus 406 ~~~~~~~~aa~vAGl~Ag~~----~~~SlT~~~i~----~~~v~~~~t~~e~e~ai~~Gvl~l~~~~~~~~~~vriv~~i 477 (587) T protein:vir:95 406 NHVPAYMVAVALGGLASGLE----IGESITFKPLR----VSSLDQIYESIDLDELNENGIISIEFVRNRTNTFFRIVDDV 477 (587) T ss_pred eeechHHHHHHHHHHHhcCc----hhcCccceeee----cccccccCCHHHHHHHHhCCeEEEEEecCCcceEEEEeecc Confidence 77787 789999999887 77899998753 34567789999999999999999987665322 33 3455 Q ss_pred eecC-CCCccceeeehhhHHHHHHHHHHHHH-HHhhcccCCHHHHHHHHHHHHHHHHHHHhcCceEEEEEEEccCCCCHH Q lcl|Aclame:pro 541 KMAT-QVPSPFDRINVRRLFNMLKKNIGDTS-KYELFENNDAFTRQSFRMETSQYLDGIRSLGGCYDFRVVCDTTNNTPN 618 (663) Q Consensus 541 rT~~-~~~~~~~~i~vrR~~~~i~~~~~~~~-~~~v~epn~~~~~~~v~~~i~~~L~~l~~~gal~g~~v~~d~~~nt~~ 618 (663) .|.. .++..|++++++|++|+|++.|++.. +||++|||++..|..|+..|..||.+||+.|+|.+|... +.+- T Consensus 478 tT~t~~~d~~~~~i~viRv~D~i~~dir~~~~~~~iGk~nn~~~r~~v~~~i~~~L~~l~~~gaI~~~~~~-----dv~v 552 (587) T protein:vir:95 478 TTFNDKSDPVKAEMAVGEANDFLVSELKVQLEDQFIGTRTINTSASIIKDFIQSYLGRKKRDNEIQDFPAE-----DVQV 552 (587) T ss_pred eeccCCCCcchhhhhhhhhHHHHHHHHHHHHHhhCCccccchHHHHHHHHHHHHHHHHHHhCCcccCCCcc-----ceEE Confidence 5542 33458999999999999999999886 699999999999999999999999999999999998541 1222 Q ss_pred HhhCCEEEEEEEEEecCcceEEEEEEEEeecccch Q lcl|Aclame:pro 619 VIDRNEFVGTIYVKPPRSINYITLNMVATSTGANF 653 (663) Q Consensus 619 ~i~~G~~~~~i~~~p~~p~e~i~~~~~~~~~~~~~ 653 (663) ++...+++|++.+.|+.|+|+|.++++......+- T Consensus 553 ~~~~d~~~v~~~v~Pv~~mekI~vt~~~~~~~~~~ 587 (587) T protein:vir:95 553 IVEGNEARISMTVYPIRSFKKISVSLVYKQQTLQA 587 (587) T ss_pred EecCCEEEEEEEEEEcccceEEEEEEEEeeeeecC Confidence 34556899999999999999999999876553332 No 39 >protein:vir:80779 Length: 569 # NCBI annotation: putative tail sheath protein # Family: family:all:2449 # MgeID: mge:1885 # MgeName: phiEF24C # Cross-refs: genbank:acc:YP_001504132;genbank:gi:158079319;genbank:GeneID:5666428 Probab=100.00 E-value=1.2e-61 Score=354.65 Aligned_cols=539 Identities=13% Similarity=0.098 Sum_probs=302.4 Q ss_pred Cc--------eecCceEEEEecCCCc-ccccCCCceEEEeecccCCCCcceEeCCHHHHHHHcCC--cCCCchhHHHHHH Q lcl|Aclame:pro 1 MA--------LLSPGIEMKETSINST-VVRSATGRAAIVGKFAWGPAYEVRQVTNEVELVDMFGS--PDNVTAPYFMSAM 69 (663) Q Consensus 1 ~~--------~~~PGVyveEv~~~~~-i~~v~Ts~~afvG~~~~Gpv~~p~~i~s~~e~~~~FG~--~~~~~~~~~~~~~ 69 (663) |+ +..|||||||.+++.+ +++++|++++|||.+++||.|+|++|+||.||++.||+ +.+-.++.|.... T Consensus 1 ~~~~~~~~~~~~~Pgv~~~~~~~~~~~~~~~~~~~~~~ig~a~~G~~~~~~~~~~~~~~~~~f~~g~l~~a~~~a~~~~~ 80 (569) T protein:vir:80 1 MAVEQFPRKKVSRPHTEITVDTSGIGGSSSSSDKTLMLVGSAKGGKPDTVYRFRNYQQAKQVLRSGDLLDAIELAWNASD 80 (569) T ss_pred CeeeeecCCccccCceEEEEecCCCcCCCCCCceeEEEEEEeCCCCCceeEEecCHHHHHHHhcCCchhHHHHhhccCcc Confidence 43 4679999999999875 89999999999999999999999999999999999965 3333445555555 Q ss_pred HHhcCCceEEEEEeccccccccccccccceeeeeccccccccccccccccccccccccceeeeeeecccceeeeeecccc Q lcl|Aclame:pro 70 NFLQYGNDLRLVRVIDMEKAKNASPLVNQVSVTITTEGQGYTVGDAITVKYNNATITEAGKVTAVDSDGKIKSLFVPTAE 149 (663) Q Consensus 70 ~F~nGG~~~~vvRv~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~v~~~~~~g~~~~~~~~~~~ 149 (663) ||.|||++||++|+.+... +....+.+.++....+. +++.+.+....++.....+.......+.... T Consensus 81 ~~~~~~~~~~~~rv~~a~~---a~~~~~~~~~~a~~~g~---~~n~i~v~l~~~~~~~~~~~~v~~~~~~~~~------- 147 (569) T protein:vir:80 81 VNTASAGDILAVRVEDAKN---ATLTKGGLTFASTIYGV---DANEIQVALEDNNLTHTKRLTVAFSKDGYKK------- 147 (569) T ss_pred ccccCceEEEEEEcCCCee---eeeeccceeeeeeeccC---CCceEEEEEecCcCCcceeeEEeeecCCCcc------- Confidence 6789999999999954322 22222333444443332 3444444332222211111111100000000 Q ss_pred hhcccccccccccceeceeeeec--ccccceeeeeec-ccccccccccccccccccccccccccccccc--cccccceee Q lcl|Aclame:pro 150 IIAKTRQLGTYPTLGDNWRIDVS--GASGGSAAALAL-GNIVVDSGVTFGNSEDAPAVMTSPAVMEKYA--KFGMPLISA 224 (663) Q Consensus 150 ~~~~~~~~~t~~~~~~~~~~~~~--~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~a 224 (663) .+.+++.-....-. ............ ...........+........ ........ ........+ T Consensus 148 ---------~~~~ig~v~si~ytg~~~~a~~~~~~~~~~~~a~~l~~~~g~~~~~~~~---v~~~~~~~~~~~~~~~lv~ 215 (569) T protein:vir:80 148 ---------VFDNLGKIFSIQYKGSEAQANFTIAQDSISKKATTLTLNVGSEPESTTE---VMKYELGQGVYSETNVLVS 215 (569) T ss_pred ---------ccccccceeeEEEeeccccceEEeecCcCcceeEEEEEEecCCcceeEE---EEeeccCCccchhhhhhhh Confidence 00001000000000 000000000000 00000000000000000000 00000000 000000000 Q ss_pred ecchhhccccccccccccccccccccceecccceecccceeEEEecccccccceeeeccCCcceeeEeeeeccccccccc Q lcl|Aclame:pro 225 VYPGEIGSTVEVEIVSKTAFNSGAQQTIYPFGGTRTSNARGVIQYGPMTDDQFAIIVRRDGIVVESTVLSTRKGDRDVYG 304 (663) Q Consensus 225 ~~~g~~g~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 304 (663) .++...+...++... . ...... ...+....+..... ...+.. T Consensus 216 ~~~~~~~f~a~~~~~----------------~----~~~~~~----~~~d~~~~~~~~t~-----~~~~~~--------- 257 (569) T protein:vir:80 216 AINSLPDWEAKFFPI----------------G----DKNLPT----DALEAVTKVDVKTE-----AVFVGA--------- 257 (569) T ss_pred hcCCccCceEEEEec----------------C----CCccee----hhccchhheecccc-----ceeeeh--------- Confidence 000000000000000 0 000000 00000000000000 000000 Q ss_pred chhhhhhhhcCCCceEEEEeecccC-CccceeEEecCcccccccccchhhhHHHHHhhhhccccceeEEeeccCcCChhH Q lcl|Aclame:pro 305 SNIFMDDYFRNGGSNFIFASSEGWP-AGFTGIIQLGGGTSANADVGADELIKGWDLFSDREALHVNLMIAGACGSDGAEI 383 (663) Q Consensus 305 ~~~~~~~~~~~~~s~~v~~~~~~~~-~~~~~~~~l~gg~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (663) ....+...+ ..+.++.....+.. ........|.||.|+... .++..+++.++.. +...+++.. . T Consensus 258 ~~~di~~~~--~~~~~v~~~~~~~~~l~~~~~~~LtGG~dG~~~---~~~~~~l~~le~~---~~~~i~~~t---~---- 322 (569) T protein:vir:80 258 LAGDIAKQL--EYNDYVTVAVDATKPVEDFELTNLTGGSDGTAP---ESWANKFPLLANE---GGYYLVPLT---D---- 322 (569) T ss_pred hHHHHHHhh--cCCceEEEEecCCcceeeecceeecCCCCCCcc---chHHHHHHHHhhC---CcEEEEecC---C---- Confidence 000011111 12233433332221 122234578899887543 3566777777654 233343321 1 Q ss_pred HHHHHHHHHHHHHhhCC----eEEEecccccccccccccccHHHHHHHHhhcccccchhhhccCcCcceEEEecCceeec Q lcl|Aclame:pro 384 ASTVQKYVVSLADDRQD----CVAIVNPPAELMVGIPTSTAVKNIVEWRNGMTGSGEVVDNNMNISSTYAFIIGNYKYQY 459 (663) Q Consensus 384 ~~~~~~~~~~~~~~~~~----~~~i~d~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~p~~~~~ 459 (663) ..+++.++.+||+++++ ++++++.+.+ .+.+++..++. +++++|.++++||..+. T Consensus 323 d~av~~~l~a~vkr~r~~g~~~~aVvg~~~~--------~~~~~~~~~a~-------------~~n~e~vv~v~~~~~~~ 381 (569) T protein:vir:80 323 KQAVHSEALAFVKDRTDNGDPMRIIVGGGTN--------ETVEESITRAT-------------NLRDPRASLVGFSGTRK 381 (569) T ss_pred ChHHHHHHHHHHHHHHhCCCcEEEEecCCCC--------CCHHHHHHHHh-------------hcCCCeEEEEecCceee Confidence 13467889999998865 8999987643 35566666654 37889999999998877 Q ss_pred ccccCceeEech---HHHHHHHHHhhhhccCceecccceecceeecceeeeeecChhhhhhhhhCCceEEEEeeCCCcEE Q lcl|Aclame:pro 460 DKYNDINRWVPL---AADIAGLCAYTDQVSHPWMSPAGYRRGQIRNCIKLAIEPKQSMRDTMYQVAINPVTGFAGGDGFV 536 (663) Q Consensus 460 d~~~~~~~~~p~---s~~~AG~~a~~d~~~g~~~span~~~~~i~~~~~~~~~~~~~~~~~Ln~~~in~i~~~~~~~G~~ 536 (663) +. .+..+.+|+ ++++||++|..+ +++||.|+.+. ..++...+++.|++.|+++|+++++.+++ +..+ T Consensus 382 ~~-~g~~~~~~~~~~aa~vAG~~A~~~----~~~S~T~k~i~----~~~i~~~lt~~e~~~li~~G~~~l~~~~~-~~~~ 451 (569) T protein:vir:80 382 MD-DGRLLKLPGYMMASQIAGIASGLE----VGEAITFKHFN----VTSVDRVFESSQLDMLNESGVISIEFVRN-RTLT 451 (569) T ss_pred cC-CCcceeechhhHHHHHHHHHhcCc----cccCccceeec----cccccccCCHHHHHHHHhCCeEEEEEecC-ceEE Confidence 63 445556666 678888888766 88999999753 34677789999999999999999988776 4455 Q ss_pred EEcc----eec-CCCCccceeeehhhHHHHHHHHHHHHH-HHhhcccCCHHHHHHHHHHHHHHHHHHHhcCceEEEEEEE Q lcl|Aclame:pro 537 LFGD----KMA-TQVPSPFDRINVRRLFNMLKKNIGDTS-KYELFENNDAFTRQSFRMETSQYLDGIRSLGGCYDFRVVC 610 (663) Q Consensus 537 ~wG~----rT~-~~~~~~~~~i~vrR~~~~i~~~~~~~~-~~~v~epn~~~~~~~v~~~i~~~L~~l~~~gal~g~~v~~ 610 (663) +|.. .|. ..++..|++++++|++|+|++.|++.. +||++|||+...|..|+..|+.||.+||++|+|.||... T Consensus 452 v~~~vn~itT~t~~~~~~~~~i~viRv~D~i~~dir~~~~~~yiGk~nn~~~r~~v~~~i~~~L~~l~~~gaI~~~~~~- 530 (569) T protein:vir:80 452 AFRVVQDVTTYNDKSDPVKNEMSVGEANDFLVSELKIELDNNFIGTKVIDTSASLIKNFIQSFLDNKKRAREIQDYTPE- 530 (569) T ss_pred EEEEeccceecCCCCCchhhhhhhhHHHHHHHHHHHHHHHhhcCcccCChhHHHHHHHHHHHHHHHHHhCCcccCCCcc- Confidence 5533 222 233458999999999999999998876 689999999999999999999999999999999997421 Q ss_pred ccCCCCHHHhhCCEEEEEEEEEecCcceEEEEEEEEeecccch Q lcl|Aclame:pro 611 DTTNNTPNVIDRNEFVGTIYVKPPRSINYITLNMVATSTGANF 653 (663) Q Consensus 611 d~~~nt~~~i~~G~~~~~i~~~p~~p~e~i~~~~~~~~~~~~~ 653 (663) +-+.++..++++|++.++|+.|+|||+++++......+- T Consensus 531 ----dv~v~~~~d~~~v~~~v~Pv~~~ekI~~ti~~~~~~~~~ 569 (569) T protein:vir:80 531 ----EVQVVLEGDVASISMTVMPIRSLNKITVQLVYKQQILTA 569 (569) T ss_pred ----ceEEEecCCEEEEEEEEEEcccccEEEEEEEEeeeeecC Confidence 123345678999999999999999999999977664443 No 40 >protein:vir:99306 Length: 587 # NCBI annotation: putative major tail sheath protein # Family: family:all:2449 # MgeID: mge:1655 # MgeName: K # Cross-refs: genbank:acc:YP_024479;genbank:gi:48696438;genbank:GeneID:2948034 Probab=100.00 E-value=6.8e-60 Score=344.94 Aligned_cols=560 Identities=14% Similarity=0.089 Sum_probs=318.1 Q ss_pred Cc--------eecCceEEEEecCCCc-ccccCCCceEEEeecccCCCCcceEeCCHHHHHHHcCCcCCCchhHHHHHHHH Q lcl|Aclame:pro 1 MA--------LLSPGIEMKETSINST-VVRSATGRAAIVGKFAWGPAYEVRQVTNEVELVDMFGSPDNVTAPYFMSAMNF 71 (663) Q Consensus 1 ~~--------~~~PGVyveEv~~~~~-i~~v~Ts~~afvG~~~~Gpv~~p~~i~s~~e~~~~FG~~~~~~~~~~~~~~~F 71 (663) |+ +++|||||||.+++.+ +++++|++++|||.++|||+++|++|+||.||++.||+ .++..++.++| T Consensus 1 ~a~~~~~~~~~~~pgv~~~~~~~~~~~~~~~~~~~~~~~g~a~~G~~~~~~~~~~~~~~~~~~~~----g~l~~~~~~a~ 76 (587) T protein:vir:99 1 MAVEPFPRRPITRPHASIEVDTSGIGGSAGSSEKVFCLIGQAEGGEPNTVYELRNYSQAKRLFRS----GELLDAIELAW 76 (587) T ss_pred CcccccCCcccccCceEEEEecCCccccCCCCCceEEEEEEecCCccceeEEeccHHHHHHHhcC----cchHHHHHHHh Confidence 43 6789999999999875 89999999999999999999999999999999999987 33555666655 Q ss_pred ----hcCCceEEEEEeccccccccccccccceeeeeccccccccccccccccccccccccceeeeeeecccceeeeeecc Q lcl|Aclame:pro 72 ----LQYGNDLRLVRVIDMEKAKNASPLVNQVSVTITTEGQGYTVGDAITVKYNNATITEAGKVTAVDSDGKIKSLFVPT 147 (663) Q Consensus 72 ----~nGG~~~~vvRv~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~v~~~~~~g~~~~~~~~~ 147 (663) .|||++||++||.+.. .+....+.+.+++..+| .+++.+++...........++......++......-- T Consensus 77 ~~~~~~g~~~~~~~rv~~~~---~a~~~~~~l~~~a~~~G---~~gN~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (587) T protein:vir:99 77 GSNPNYTAGRILAMRIEDAK---PASAEIGGLKITSKIYG---NVANNIQVGLEKNTLSDSLRLRVIFQDDRFNEVYDNI 150 (587) T ss_pred ccccCCCceEEEEEEcCCCc---eeEEEecCeEEEEeecc---ccccceEEEEccCCCCcceeEEEEEecccceeeeeec Confidence 7999999999995443 33344456777777666 4778777755544333322232222222111111110 Q ss_pred cchhcccccccccccceeceeeeeccccc-ceeeeeecccc-cccccccccccccccccccccccccccccccccceeee Q lcl|Aclame:pro 148 AEIIAKTRQLGTYPTLGDNWRIDVSGASG-GSAAALALGNI-VVDSGVTFGNSEDAPAVMTSPAVMEKYAKFGMPLISAV 225 (663) Q Consensus 148 ~~~~~~~~~~~t~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 225 (663) +........ +.. .............. .....+..+.. +..... +. + ...............+...+. T Consensus 151 g~v~~i~y~-g~~--~~a~~~v~~~~~t~~a~~~~l~~g~~~v~~yrL--~~-----g-~~~~~~~~~~~i~~~~~~tAk 219 (587) T protein:vir:99 151 GNIFTIKYK-GEE--ANATFSVEHDEETQKASRLVLKVGDQEVKSYDL--TG-----G-AYDYTNAIITDINQLPDFEAK 219 (587) T ss_pred cceeeEEee-ccc--ccceeeEeecCcceeeeeeeeecCCceeEEEEe--cC-----C-chHHHHHHHhhhccccceeEE Confidence 110000000 000 00000000000000 00000000000 000000 00 0 000000000011123345666 Q ss_pred cchhhccccccccccccccccccccceecccceecccceeEEEecccccccceeeeccCCcceeeEeeeecccccccccc Q lcl|Aclame:pro 226 YPGEIGSTVEVEIVSKTAFNSGAQQTIYPFGGTRTSNARGVIQYGPMTDDQFAIIVRRDGIVVESTVLSTRKGDRDVYGS 305 (663) Q Consensus 226 ~~g~~g~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 305 (663) +++..++.+.+...... . .............. .. +........ ....+...++...... T Consensus 220 y~~~~~~~i~~~~~~~~--~-~~~v~~~~~~v~a~--~~-------------D~~~~~~~~--~~~~~~~~~g~~~~~~- 278 (587) T protein:vir:99 220 LSPFGDKNLESSKLDKI--E-NANIKDKAVYVKAV--FG-------------DLEKQTAYN--GIVSFEQLNAEGEVPS- 278 (587) T ss_pred eeccCCceeEeeccccc--c-cceeeeeeeeeehh--cc-------------ceeeecccc--eeeeeeecccccchhh- Confidence 66555555443221100 0 00000000000000 00 000000000 0000000100000000 Q ss_pred hhhhhhhhcCCCceEEEEeecccCCccceeEEecCcccccccccchhhhHHHHHhhhhccccceeEEeeccCcCChhHHH Q lcl|Aclame:pro 306 NIFMDDYFRNGGSNFIFASSEGWPAGFTGIIQLGGGTSANADVGADELIKGWDLFSDREALHVNLMIAGACGSDGAEIAS 385 (663) Q Consensus 306 ~~~~~~~~~~~~s~~v~~~~~~~~~~~~~~~~l~gg~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (663) .... ........+................|.||.++..+ .++..+++.|+..+ ...++++ . . .. T Consensus 279 --~~~~-~~~~~~~~~~~~~~~~~~a~~~~t~LtGG~dG~~~---~sy~~al~ale~~~---~~~i~~~-t--~----d~ 342 (587) T protein:vir:99 279 --NVEV-EAGEESATVTATSPIKTIEPFELTKLKGGTNGEPP---ATWADKLDKFAHEG---GYYIVPL-S--S----KQ 342 (587) T ss_pred --hhhh-hhccccceeeeeccccceecccceeeecCCCCCcc---ccHHHHHHHHhhCC---cEEEEec-C--C----CH Confidence 0000 00011111111111111111223458898887543 45677777776543 3333322 1 1 12 Q ss_pred HHHHHHHHHHHhhCC----eEEEecccccccccccccccHHHHHHHHhhcccccchhhhccCcCcceEEEecCceeeccc Q lcl|Aclame:pro 386 TVQKYVVSLADDRQD----CVAIVNPPAELMVGIPTSTAVKNIVEWRNGMTGSGEVVDNNMNISSTYAFIIGNYKYQYDK 461 (663) Q Consensus 386 ~~~~~~~~~~~~~~~----~~~i~d~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~p~~~~~d~ 461 (663) +++.++.+||+++++ ++++++.+.+ .+.+++..+... +++.+..+++|+..+. . T Consensus 343 ~i~a~l~a~vk~~r~~g~~~~aVlg~~~~--------~~~~~~~~~a~~-------------~n~e~vi~v~~~~~~~-~ 400 (587) T protein:vir:99 343 SVHAEVASFVKERSDAGEPMRAIVGGGFN--------ESKEQLFGRQAS-------------LSNPRVSLVANSGTFV-M 400 (587) T ss_pred HHHHHHHHHHHHHHhCCCcEEEEecCCCC--------CCHHHHHHHhhh-------------cCCCcEEEEeccceEe-c Confidence 467788899988765 8999987643 355666665543 6788999998876543 2 Q ss_pred ccCceeEech---HHHHHHHHHhhhhccCceecccceecceeecceeeeeecChhhhhhhhhCCceEEEEeeCCCc--EE Q lcl|Aclame:pro 462 YNDINRWVPL---AADIAGLCAYTDQVSHPWMSPAGYRRGQIRNCIKLAIEPKQSMRDTMYQVAINPVTGFAGGDG--FV 536 (663) Q Consensus 462 ~~~~~~~~p~---s~~~AG~~a~~d~~~g~~~span~~~~~i~~~~~~~~~~~~~~~~~Ln~~~in~i~~~~~~~G--~~ 536 (663) .++....+|| ++++||++|..| +++||.|+.+. ..++...+++.|++.|+++|+++++..++..+ ++ T Consensus 401 ~dg~~~~~~~~~~aa~vAGl~Ag~~----~~~SlT~~~i~----~~~v~~~~t~~e~e~li~~Gvl~l~~~~~~~~~~vr 472 (587) T protein:vir:99 401 DDGRKNHVPAYMVAVALGGLASGLE----IGESITFKPLR----VSSLDQIYESIDLDELNENGIISIEFVRNRTNTFFR 472 (587) T ss_pred CCCceeeechHHHHHHHHHHHhcCc----hhcCccceeee----cccccccCCHHHHHHHHhCCeEEEEEecCCcceEEE Confidence 2456677777 789999999887 77899998753 34567789999999999999999987765322 43 Q ss_pred E-EcceecC-CCCccceeeehhhHHHHHHHHHHHHH-HHhhcccCCHHHHHHHHHHHHHHHHHHHhcCceEEEEEEEccC Q lcl|Aclame:pro 537 L-FGDKMAT-QVPSPFDRINVRRLFNMLKKNIGDTS-KYELFENNDAFTRQSFRMETSQYLDGIRSLGGCYDFRVVCDTT 613 (663) Q Consensus 537 ~-wG~rT~~-~~~~~~~~i~vrR~~~~i~~~~~~~~-~~~v~epn~~~~~~~v~~~i~~~L~~l~~~gal~g~~v~~d~~ 613 (663) + .+-.|.. .++..|++++++|++|+|++.|++.. ++|++|||++..|..|+..|..||.+||+.|+|.+|... T Consensus 473 iv~~ItT~t~~~~~~~~~i~viRv~D~i~~di~~~~~~~yiGk~Nn~~~r~~i~~~i~~~L~~l~~~gaI~~~~~~---- 548 (587) T protein:vir:99 473 IVDDVTTFNDKSDPVKAEMAVGEANDFLVSELKVQLEDQFIGTRTINTSASIIKDFIQSYLGRKKRDNEIQDFPAE---- 548 (587) T ss_pred EeeceeeccCCCCchhhhhhhhhhHHHHHHHHHHHHHhhCCccccchHHHHHHHHHHHHHHHHHHhCCcccCCCcc---- Confidence 3 4555542 33457999999999999999999886 689999999999999999999999999999999998541 Q ss_pred CCCHHHhhCCEEEEEEEEEecCcceEEEEEEEEeecccch Q lcl|Aclame:pro 614 NNTPNVIDRNEFVGTIYVKPPRSINYITLNMVATSTGANF 653 (663) Q Consensus 614 ~nt~~~i~~G~~~~~i~~~p~~p~e~i~~~~~~~~~~~~~ 653 (663) ..+-+....+++|++.+.|+.|+|+|++++.......+- T Consensus 549 -dv~v~~~~d~~~v~~~v~Pv~~mekIy~tv~~~~~~~~~ 587 (587) T protein:vir:99 549 -DVQVIVEGNEARISMTVYPIRSFKKISVSLVYKQQTLQA 587 (587) T ss_pred -ceEEEecCCEEEEEEEEEEcccceEEEEEEEEEeeeecC Confidence 111123455799999999999999999999887664433 No 41 >protein:vir:96586 Length: 587 # NCBI annotation: ORF011 # Family: family:all:2449 # MgeID: mge:1623 # MgeName: Twort # Cross-refs: genbank:acc:YP_238553;genbank:gi:66391266;genbank:GeneID:5130368 Probab=100.00 E-value=4e-58 Score=335.28 Aligned_cols=559 Identities=14% Similarity=0.085 Sum_probs=308.7 Q ss_pred Cc--------eecCceEEEEecCCCc-ccccCCCceEEEeecccCCCCcceEeCCHHHHHHHcCCcCCCchhHHHHHHHH Q lcl|Aclame:pro 1 MA--------LLSPGIEMKETSINST-VVRSATGRAAIVGKFAWGPAYEVRQVTNEVELVDMFGSPDNVTAPYFMSAMNF 71 (663) Q Consensus 1 ~~--------~~~PGVyveEv~~~~~-i~~v~Ts~~afvG~~~~Gpv~~p~~i~s~~e~~~~FG~~~~~~~~~~~~~~~F 71 (663) |+ |++||||||+.+++.. +.++++++.+|||.+++||+++|++|++|.||++.||+- .+..++.+.| T Consensus 1 ~~~~~~~~~~~~~Pgv~~~~~~~~~~~~~~~~~~~~~~iG~a~~g~~~~~~~~~~~~~~~~~~g~G----~l~~ai~~a~ 76 (587) T protein:vir:96 1 MAKDIFPRRPIQRPHASIEVDSSGIGGSASNSEKILCLIGKAEGGEPNTVYQVRNYAQAKSVFRSG----ELLDAIELAW 76 (587) T ss_pred CeeeeeCCCcccCCceEEEEecCCccCCCCCCCceEEEEEEecCCCCceeEEEcChHHHHHhhcCC----cHHHHHHHHh Confidence 33 6889999999999875 899999999999999999999999999999999999874 3666777666 Q ss_pred ----hcCCceEEEEEeccccccccccccccceeeeeccccccccccccccccccccccccceeeeeeecccceeeeeecc Q lcl|Aclame:pro 72 ----LQYGNDLRLVRVIDMEKAKNASPLVNQVSVTITTEGQGYTVGDAITVKYNNATITEAGKVTAVDSDGKIKSLFVPT 147 (663) Q Consensus 72 ----~nGG~~~~vvRv~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~v~~~~~~g~~~~~~~~~ 147 (663) .|||+.||.|||.+... ++...+.+.++....+ ++++.+.+...........+.......++......-. T Consensus 77 ~~~~~~g~~~~~a~rv~~~~~---a~~~~~~~~~~~~~~g---~~~n~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~n~ 150 (587) T protein:vir:96 77 GSNPQYTAGKILAMRVEDAKA---SQLEKGGLRVTSKIFG---SVSNDIQVALEKNTITDSLRLRVVFQKDNYQEVFDNL 150 (587) T ss_pred ccCcCCCceEEEEEecCCCcc---ceeecccccccccccC---CCCceEEEEEEeccCCCccceEEEEecCCceeecccc Confidence 79999999999954322 2222222333322222 2455554444222111111111111111111110000 Q ss_pred cchhcccccccccccceeceeeeeccc-ccceeeeeecccccccccccccccccccccccccccccccccccccceeeec Q lcl|Aclame:pro 148 AEIIAKTRQLGTYPTLGDNWRIDVSGA-SGGSAAALALGNIVVDSGVTFGNSEDAPAVMTSPAVMEKYAKFGMPLISAVY 226 (663) Q Consensus 148 ~~~~~~~~~~~t~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 226 (663) ++....... ++. ............ ......++..+...+. ....++.... ............+.+.+.+ T Consensus 151 G~v~~i~y~-g~~--~~a~~~~~~~~~~~~A~~l~l~gg~~~v~-~yrl~~g~~~------~~~~~~~~~~~~~~~tAky 220 (587) T protein:vir:96 151 GNIFSINYK-GEG--EKATFSVEKDKETQEAKRLVLKVDEKEVK-AYELNGGAYS------FTNEIITDINELPDFEAKL 220 (587) T ss_pred CceEEEEec-ccc--cceeEeeccCcccceeeeeEEEecCceEE-EEEeCCCchh------hhhhhhhhhccccceEEEe Confidence 000000000 000 000000000000 0000000000000000 0000000000 0000011112345667778 Q ss_pred chhhccccccccccccccccccccceecccceecccceeEEEecccccccceeeeccCCcceeeEeeeecccccccccch Q lcl|Aclame:pro 227 PGEIGSTVEVEIVSKTAFNSGAQQTIYPFGGTRTSNARGVIQYGPMTDDQFAIIVRRDGIVVESTVLSTRKGDRDVYGSN 306 (663) Q Consensus 227 ~g~~g~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 306 (663) ++..++.+++........... .....+..............+.. .. +...... .. T Consensus 221 ~g~~~n~~~v~v~d~~~~~~~----------------k~~~~y~~t~~~di~~~~~~~~~-~~---~~~~~~~-----~~ 275 (587) T protein:vir:96 221 SPFGDKNLESRKLDEATDVDI----------------KGKAVYVKAVFGDIENQTQYNQY-VK---FEQLPEQ-----AS 275 (587) T ss_pred ecccCceeEEEeecccccccc----------------ceEEEeehhhhhhhhhhhccccc-ee---eccccch-----hh Confidence 877777776653221100000 00000110000000000000000 00 0000000 00 Q ss_pred hhhh-hhhcCCCceEEEEeecccCCccceeEEecCcccccccccchhhhHHHHHhhhhccccceeEEeeccCcCChhHHH Q lcl|Aclame:pro 307 IFMD-DYFRNGGSNFIFASSEGWPAGFTGIIQLGGGTSANADVGADELIKGWDLFSDREALHVNLMIAGACGSDGAEIAS 385 (663) Q Consensus 307 ~~~~-~~~~~~~s~~v~~~~~~~~~~~~~~~~l~gg~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (663) .... .+.........................|.||.++..+ .++..+++.++.. +...++++. ++ . T Consensus 276 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~aLtGG~dG~~~---~~y~~~l~ale~~---~~~~i~~~t---~d----~ 342 (587) T protein:vir:96 276 EPSDVEVHAETESATVTATSKPKAIEPFELTKLSGGTNGEPP---TSWSAKLEKFKNE---GGYYIVPLT---DR----Q 342 (587) T ss_pred hhhcccccccccceeeeecccccccccccceeeecCCCCCCc---ccHHHHHHHHhhC---CcEEEEecC---CC----H Confidence 0000 0000011111111111111112223458888887543 3566666666654 333443321 11 2 Q ss_pred HHHHHHHHHHHhhCC----eEEEecccccccccccccccHHHHHHHHhhcccccchhhhccCcCcceEEEecCceeeccc Q lcl|Aclame:pro 386 TVQKYVVSLADDRQD----CVAIVNPPAELMVGIPTSTAVKNIVEWRNGMTGSGEVVDNNMNISSTYAFIIGNYKYQYDK 461 (663) Q Consensus 386 ~~~~~~~~~~~~~~~----~~~i~d~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~p~~~~~d~ 461 (663) +++..+.+||+++++ ++++++.+.+ .+.+++...+. .+++++.++++++..+.+. T Consensus 343 ai~~~l~a~vk~~r~~gk~~~aVlg~~~~--------~~~~~~~~~a~-------------~~n~e~vi~v~~~~~~~~~ 401 (587) T protein:vir:96 343 SVHSEVATFVKNRSDAGEPMRAIVGGGTS--------ETKEKLFGRQA-------------ILNNPRVALVANSGKFVMG 401 (587) T ss_pred HHHHHHHHHHHHHHhCCCeEEEEecCCCC--------CCHHHHHHHHh-------------hcCCCcEEEEecceEEecC Confidence 467788899988765 8999986643 35555555543 3678899999998887764 Q ss_pred ccCceeEech---HHHHHHHHHhhhhccCceecccceecceeecceeeeeecChhhhhhhhhCCceEEEEeeCCCcEEEE Q lcl|Aclame:pro 462 YNDINRWVPL---AADIAGLCAYTDQVSHPWMSPAGYRRGQIRNCIKLAIEPKQSMRDTMYQVAINPVTGFAGGDGFVLF 538 (663) Q Consensus 462 ~~~~~~~~p~---s~~~AG~~a~~d~~~g~~~span~~~~~i~~~~~~~~~~~~~~~~~Ln~~~in~i~~~~~~~G~~~w 538 (663) ++.....|+ ++++||++|..+ +++||.|+.+. + .++...+++.|++.|+++|+.+++...+ ++.++| T Consensus 402 -~~~~~~~~~~~~aa~vAG~~Ag~~----~~~S~T~~~~~---~-~~v~~~~t~~e~~~~i~~G~~~l~~~~~-~~~~v~ 471 (587) T protein:vir:96 402 -NGRILQAPAYMVASAVAGLVSGLD----IGESITFKPLF---V-NSLDKVYESEELDELNENGIITIEFVRN-RMTTMF 471 (587) T ss_pred -CCceeeechhhHHHHHHHHHhcCc----cccCccceeee---c-ccccccCCHHHHHHHHhCCeEEEEEecC-CcEEEE Confidence 334444444 688999999886 77899998753 2 3567789999999999999999988776 445555 Q ss_pred cc-eec----CCCCccceeeehhhHHHHHHHHHHHHH-HHhhcccCCHHHHHHHHHHHHHHHHHHHhcCceEEEEEEEcc Q lcl|Aclame:pro 539 GD-KMA----TQVPSPFDRINVRRLFNMLKKNIGDTS-KYELFENNDAFTRQSFRMETSQYLDGIRSLGGCYDFRVVCDT 612 (663) Q Consensus 539 G~-rT~----~~~~~~~~~i~vrR~~~~i~~~~~~~~-~~~v~epn~~~~~~~v~~~i~~~L~~l~~~gal~g~~v~~d~ 612 (663) .. +++ ..++..|++++++|++|+|++.|++.. ++|++|||+...|..|+..|..||.+|++.|+|.+|... T Consensus 472 ~~vnsitT~t~~~~~~~~~i~virv~D~i~~di~~~~~~~yiGk~nn~~~r~~v~~~i~~~L~~l~~~g~I~~~~~~--- 548 (587) T protein:vir:96 472 RIVDDVTTFPDKNDPVKSEMALGEANDFLVSELKILLEEQYIGTRTINTSASQIKDFVQSYLGRKKRDNEIQDFPPE--- 548 (587) T ss_pred EeeccceecCCCCCchhhhhhhHHHHHHHHHHHHHHHHhcCCccccCHHHHHHHHHHHHHHHHHHHhCCcccCCCcc--- Confidence 33 433 223457999999999999999999886 689999999999999999999999999999999997541 Q ss_pred CCCCHHHhhCCEEEEEEEEEecCcceEEEEEEEEeecccch Q lcl|Aclame:pro 613 TNNTPNVIDRNEFVGTIYVKPPRSINYITLNMVATSTGANF 653 (663) Q Consensus 613 ~~nt~~~i~~G~~~~~i~~~p~~p~e~i~~~~~~~~~~~~~ 653 (663) +.+-++...+++|++.++|+.|+|||++++......++- T Consensus 549 --dv~v~~~~D~~~v~~~v~Pv~~mekIy~tv~~~~~~~~~ 587 (587) T protein:vir:96 549 --DVQVIIEGNEARISLTIFPIRALKKISVSLVYRQQTLQA 587 (587) T ss_pred --ceEEEecCCEEEEEEEEEEcccceEEEEEEEEEeeeecC Confidence 111123445799999999999999999999865543332 No 42 >protein:vir:100829 Length: 607 # NCBI annotation: hypothetical protein # Family: family:all:2449 # MgeID: mge:1633 # MgeName: LP65 # Cross-refs: genbank:acc:YP_164738;genbank:gi:56693151;genbank:GeneID:3197462 Probab=100.00 E-value=9.1e-52 Score=300.41 Aligned_cols=556 Identities=14% Similarity=0.137 Sum_probs=299.1 Q ss_pred Cc-eecCceEEEEecCCCc-ccccCCCceEEEeecccCCCCcceEeCCHHHHHHHcCC--cCCCchhHHHHHHHHhcCCc Q lcl|Aclame:pro 1 MA-LLSPGIEMKETSINST-VVRSATGRAAIVGKFAWGPAYEVRQVTNEVELVDMFGS--PDNVTAPYFMSAMNFLQYGN 76 (663) Q Consensus 1 ~~-~~~PGVyveEv~~~~~-i~~v~Ts~~afvG~~~~Gpv~~p~~i~s~~e~~~~FG~--~~~~~~~~~~~~~~F~nGG~ 76 (663) |- +.+||||+++.+++.. +.++++++.+|||.+++||+++|++|+||.|+++.||+ +.+--.+.|.+..||.|||+ T Consensus 17 ~~~~~~pgv~~~~~~~~~~~~~~~~~~~~~~iG~a~~G~~~~~~~~~~~~~a~~~f~~g~l~~a~~~a~~~~~~~~~g~~ 96 (607) T protein:vir:10 17 LFYDSRPHVETNFDDSRLSNTASDSAKNIFMLGSATNGDPTKVYEIRTSQQATKIFGSGDLVDGIKLAFDPTGNSVTNGG 96 (607) T ss_pred CCCccCCceEEEEecCcCcCCCCCCcceEEEEEEeCCCCCceEEEEcchhHHHHhhcCcchHHHHHHhhccccCCccCCc Confidence 33 5789999999999986 89999999999999999999999999999999999965 33344566666777899999 Q ss_pred eEEEEEeccccccccccccccceeeeeccccccccccccccccccccccccceeeeeeecccceeeeeecccchhccccc Q lcl|Aclame:pro 77 DLRLVRVIDMEKAKNASPLVNQVSVTITTEGQGYTVGDAITVKYNNATITEAGKVTAVDSDGKIKSLFVPTAEIIAKTRQ 156 (663) Q Consensus 77 ~~~vvRv~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~v~~~~~~g~~~~~~~~~~~~~~~~~~ 156 (663) .||+|||.+...+. ...+...++....+ .+++.+++....+. ...-+.+....-.+......--+.... T Consensus 97 ~~~~~rv~~~~~a~---~~~~~~~~~~~~~~---~~~~~i~~~l~~~~-~~~~~~~~~~~~d~~~~~~~n~g~~~~---- 165 (607) T protein:vir:10 97 TVYALRVDNAKQAS---LVKDGLTFTSSIFG---TNANQVSVALDNDV-FGVPRITVNYSPDNYERTYTNIGQMFS---- 165 (607) T ss_pred eEEEEeCCCccccc---eecccccccccccc---cCCCceEEEEEecC-CCccceeEEeecccceeeeeeccceee---- Confidence 99999995533221 11111122222111 23344443332111 111111110000000000000000000 Q ss_pred cccccccee-ceeeeecccccceeeeeeccccccc-ccccccccccccccccccccccccccccccc----------eee Q lcl|Aclame:pro 157 LGTYPTLGD-NWRIDVSGASGGSAAALALGNIVVD-SGVTFGNSEDAPAVMTSPAVMEKYAKFGMPL----------ISA 224 (663) Q Consensus 157 ~~t~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~a 224 (663) ......... ...+............+..+..... .......+.. +....... ........+. +.+ T Consensus 166 i~y~g~~~~a~~~v~~~~~g~~~~lt~~~~~~~~~~~~V~~~~l~~--~~~~t~~~-l~~din~~~~~~A~~~g~~~i~t 242 (607) T protein:vir:10 166 ITYSGKSASAGYTVSHDTDGKAILLTLGSGDSIDKLTNVATFDLTM--SKYDTIAK-LMQAISATPNFSASVVGSPSVNT 242 (607) T ss_pred cccCcccccccceeeecCCCceeEEEecCCCccceeeeeecccccc--cccchHHH-HHHHhhcCCceEEEEecccceee Confidence 000000000 0000000000000000000000000 0000000000 00000000 0000001111 111 Q ss_pred ecchhhccccccccccccccccccccceecccceecccceeEEEecccccccceeeeccCCcceeeEeeeeccccccccc Q lcl|Aclame:pro 225 VYPGEIGSTVEVEIVSKTAFNSGAQQTIYPFGGTRTSNARGVIQYGPMTDDQFAIIVRRDGIVVESTVLSTRKGDRDVYG 304 (663) Q Consensus 225 ~~~g~~g~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 304 (663) .+++..+..+++..-. .-......++....... ....+......... T Consensus 243 ky~d~~~~~i~V~~~~-----------------------------~iv~a~~~D~~~~~~~~--~~~~~t~~~~~~~~-- 289 (607) T protein:vir:10 243 SYLDEVTSPVDVKTAP-----------------------------AVVTAKIGDAISKLGYD--PYVVVTQTSNNKPI-- 289 (607) T ss_pred eccccccceeEEEEee-----------------------------eeechhhhhhhhccccc--ceEEeeecccchhh-- Confidence 1111111111111000 00000000000000000 00000000000000 Q ss_pred chhhhhhhhcCCCceEEEEe----ecccCCccceeEEecCcccccccccchhhhHHHHHhhhhccccceeEEeeccCcCC Q lcl|Aclame:pro 305 SNIFMDDYFRNGGSNFIFAS----SEGWPAGFTGIIQLGGGTSANADVGADELIKGWDLFSDREALHVNLMIAGACGSDG 380 (663) Q Consensus 305 ~~~~~~~~~~~~~s~~v~~~----~~~~~~~~~~~~~l~gg~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 380 (663) ...... ........ ....+.. .....|.||.|+.. ..++..+++.|+..+ ...+++.. .+ T Consensus 290 ----~~~~~~--~~~~~~~~~~~~~~~~~a~-~a~~~LtGGtdG~~---~~ty~dal~aLe~~e---~~~i~~~t---~d 353 (607) T protein:vir:10 290 ----VNGVSA--GTGSATASVTTAPESFPAN-FDTAFLTGGSTGDV---PVSWADKFNGAIGNN---VYYIIPLT---SE 353 (607) T ss_pred ----hhhhhc--cccceeeeeeccccccccc-cceeeeeCCCCCCc---hhhHHHHHHHHhhcC---ceEEEecC---CC Confidence 000000 01111111 1111211 12346889988754 245666666666543 33333321 11 Q ss_pred hhHHHHHHHHHHHHHHhhCC----eEEEecccccccccccccccHHHHHHHHhhcccccchhhhccCcCcceEEEecCce Q lcl|Aclame:pro 381 AEIASTVQKYVVSLADDRQD----CVAIVNPPAELMVGIPTSTAVKNIVEWRNGMTGSGEVVDNNMNISSTYAFIIGNYK 456 (663) Q Consensus 381 ~~~~~~~~~~~~~~~~~~~~----~~~i~d~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~p~~ 456 (663) .+++.++.+||+++++ +++++..+.+ .+++++.++... +++++..++.|+. T Consensus 354 ----~ai~~~l~a~vkr~~~~g~~~~aVlg~~~~--------~t~~~~~t~a~~-------------~N~ervv~V~~~~ 408 (607) T protein:vir:10 354 ----ENIHAELQAFIDEQHVLGYNYHAFVGGGFA--------EPLEQILSRQVN-------------INDSRFGLVGQSG 408 (607) T ss_pred ----HHHHHHHHHHHHHHHhCCCcEEEEecCCCC--------CCHHHHHHHHHh-------------hCCCcEEEEecCe Confidence 2467888899988765 8898877643 356667666554 6788999999998 Q ss_pred eecccccCceeEech---HHHHHHHHHhhhhccCceecccceecceeecceeeeeecChhhhhhhhhCCceEEEEeeC-- Q lcl|Aclame:pro 457 YQYDKYNDINRWVPL---AADIAGLCAYTDQVSHPWMSPAGYRRGQIRNCIKLAIEPKQSMRDTMYQVAINPVTGFAG-- 531 (663) Q Consensus 457 ~~~d~~~~~~~~~p~---s~~~AG~~a~~d~~~g~~~span~~~~~i~~~~~~~~~~~~~~~~~Ln~~~in~i~~~~~-- 531 (663) .+.| .+..+..|+ ++++||++|..+ +.+||.|+.+. ..++...+++.|++.|.++|+.++...++ T Consensus 409 ~~~~--~G~~~~~~~~~~Aa~vAGl~Ag~~----~~~SlT~k~i~----~~~v~~~lt~~e~e~ai~~Gv~~l~~~~~~~ 478 (607) T protein:vir:10 409 HVQE--GGESVHVPAYLMAAYVGGLSSSLG----VAVPITNKKLA----LVDLDQNFSGDDLNTLNQNGVIGIEHLVNRN 478 (607) T ss_pred eEee--CCcceeccHHHHHHHHHHHHhcCc----cccCcccceec----cccccccCCHHHHHHHHhCCeEEEEEccCcc Confidence 7765 355566665 688999999887 77899998653 34677889999999999999999976443 Q ss_pred -CCcEEEEcceec--CCCCccceeeehhhHHHHHHHHHHHHH-HHhhcccCCHHHHHHHHHHHHHHHHHHHh--cCceEE Q lcl|Aclame:pro 532 -GDGFVLFGDKMA--TQVPSPFDRINVRRLFNMLKKNIGDTS-KYELFENNDAFTRQSFRMETSQYLDGIRS--LGGCYD 605 (663) Q Consensus 532 -~~G~~~wG~rT~--~~~~~~~~~i~vrR~~~~i~~~~~~~~-~~~v~epn~~~~~~~v~~~i~~~L~~l~~--~gal~g 605 (663) .++++++.+-|. ..++..|++++++|++|+|.+.+++.. ++|++++|++..|.+++..+..||..+|+ .|+|.+ T Consensus 479 ~~~~vrIv~~ItT~t~~~~~~~~~i~viRv~D~i~~dir~~~~~~yIGk~nnd~~~~~vk~~i~~~L~~~~l~~~gaI~d 558 (607) T protein:vir:10 479 ATGGYYIVQDVSTNTVSSSHVDGSLYLGELTDFLFDNLRFVLRDTYIGSNIRSTSADDIKSTVASYLYSEMNNDDGLIVD 558 (607) T ss_pred ccceEEEeeeeeeccCCCCcchheeehhhhHHHHHHHHHHHHhhcCCcccCCcchHHHHHHHHHHHHHHHHHHhcCceeC Confidence 135787777554 234468999999999999999999886 58999999999999999999999976655 699999 Q ss_pred EEEEEccCCCCHHHhhCCEEEEEEEEEecCcceEEEEEEEEeecccchhhhhhh Q lcl|Aclame:pro 606 FRVVCDTTNNTPNVIDRNEFVGTIYVKPPRSINYITLNMVATSTGANFDELIGP 659 (663) Q Consensus 606 ~~v~~d~~~nt~~~i~~G~~~~~i~~~p~~p~e~i~~~~~~~~~~~~~~e~~~~ 659 (663) |... +.+-.....+++|++.++|+.++|+|++++.......+-++---. T Consensus 559 f~~e-----dv~v~~~~D~v~v~~~v~Pv~~iekIyvtv~v~~~~~~~~~~~~~ 607 (607) T protein:vir:10 559 FSES-----DIVVTISGTVVYIQFAVAPTQEIKNIVVSGTYSNYSATSEDNTTK 607 (607) T ss_pred CCcc-----ccEEeeCCCEEEEEEEEEEcccceEEEEEEEEEEEEEeeccCCCC Confidence 7421 111123456899999999999999999999887765544332221 No 43 >protein:vir:102957 Length: 437 # NCBI annotation: sheath tail protein # Family: family:all:632 # MgeID: mge:1461 # MgeName: EJ-1 # Cross-refs: genbank:acc:NP_945292;genbank:gi:39653727;uniprot:Q708M0;genbank:GeneID:2672871 Probab=100.00 E-value=8.3e-51 Score=295.14 Aligned_cols=415 Identities=15% Similarity=0.162 Sum_probs=265.7 Q ss_pred CceecCceEEEEecCCC-cccccCCCceEEEeecccCCCCcceEeCCHHHHHHHcCCcCCCchhHHHHHHHHhcCCceEE Q lcl|Aclame:pro 1 MALLSPGIEMKETSINS-TVVRSATGRAAIVGKFAWGPAYEVRQVTNEVELVDMFGSPDNVTAPYFMSAMNFLQYGNDLR 79 (663) Q Consensus 1 ~~~~~PGVyveEv~~~~-~i~~v~Ts~~afvG~~~~Gpv~~p~~i~s~~e~~~~FG~~~~~~~~~~~~~~~F~nGG~~~~ 79 (663) +...-|||||||++.+. +|++++|++++|+|.++|||+++|++|+|+.||++.||+... +..+.+..+|+|||++|| T Consensus 9 ~~k~~PGvYi~~~~~~~~~i~~~~~~~~a~~~~~~~Gp~~~~~~i~s~~d~~~~fG~~~~--~~~~~~~~~~~~g~~~~~ 86 (437) T protein:vir:10 9 QNKVRPGAYINVKSKDIAMTRLGGDGVVTVPLALSFGQSKKLMKIRRGEDLFKKLGYEQE--SPQLLLLNEAFKRVSEVL 86 (437) T ss_pred cceecCceeEEEecCCcceeeccCCcEEEEEEEecCCCCceeEEEecHHHHHHHcCCccc--hhHHHHHHHHhcCCCEEE Confidence 66788999999999876 589999999999999999999999999999999999997443 444445556679999999 Q ss_pred EEEeccccccccccccccceeeeeccccccccccccccccccccccccceeeeeeecccceeeeeecccchhcccccccc Q lcl|Aclame:pro 80 LVRVIDMEKAKNASPLVNQVSVTITTEGQGYTVGDAITVKYNNATITEAGKVTAVDSDGKIKSLFVPTAEIIAKTRQLGT 159 (663) Q Consensus 80 vvRv~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~v~~~~~~g~~~~~~~~~~~~~~~~~~~~t 159 (663) ++|+.++..+. .++. + T Consensus 87 ~~R~~~g~~a~--~tl~-----------------~--------------------------------------------- 102 (437) T protein:vir:10 87 LYRLNTGEKAN--VSLS-----------------D--------------------------------------------- 102 (437) T ss_pred EEECCCCceee--Eeec-----------------c--------------------------------------------- Confidence 99986432100 0000 0 Q ss_pred cccceeceeeeecccccceeeeeecccccccccccccccccccccccccccccccccccccceeeecchhhccccccccc Q lcl|Aclame:pro 160 YPTLGDNWRIDVSGASGGSAAALALGNIVVDSGVTFGNSEDAPAVMTSPAVMEKYAKFGMPLISAVYPGEIGSTVEVEIV 239 (663) Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~g~~g~~v~v~~~ 239 (663) ...+.+.++|.|||.+++.+. T Consensus 103 -----------------------------------------------------------~~~~~A~~~G~~gn~i~v~v~ 123 (437) T protein:vir:10 103 -----------------------------------------------------------NVTAQAKYSGVRGNDITVTVK 123 (437) T ss_pred -----------------------------------------------------------ceEEEeccCCcccceeEEEEe Confidence 001234455556665555432 Q ss_pred cccccccccccceecccceecccceeEEEecccccccceeeeccCCcceeeEeeeecccccccccchhhhhhhhcCCCce Q lcl|Aclame:pro 240 SKTAFNSGAQQTIYPFGGTRTSNARGVIQYGPMTDDQFAIIVRRDGIVVESTVLSTRKGDRDVYGSNIFMDDYFRNGGSN 319 (663) Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~ 319 (663) ....-. ..+.+.+...........+.... +... .. T Consensus 124 ~~~~d~-----------------------------~~~~v~~~~~~~~~d~~~v~~~~-------------~~~~---n~ 158 (437) T protein:vir:10 124 TNVDDP-----------------------------SSFDVVTFLDTVVMDLQTVKVLA-------------DLKN---NA 158 (437) T ss_pred eccCCc-----------------------------cceEEEEecCcceeeeeehhhhh-------------hhhh---hc Confidence 211000 00000000000000000000000 0000 00 Q ss_pred EEEEeecccCCccceeEEecCcccccccccchhhhHHHHHhhhhccccceeEEeeccCcCChhHHHHHHHHHHHHHHhhC Q lcl|Aclame:pro 320 FIFASSEGWPAGFTGIIQLGGGTSANADVGADELIKGWDLFSDREALHVNLMIAGACGSDGAEIASTVQKYVVSLADDRQ 399 (663) Q Consensus 320 ~v~~~~~~~~~~~~~~~~l~gg~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 399 (663) ++.......... ....++.||.++. ++..++..+++.++.. ..+.++++.. + .++++++.+||++++ T Consensus 159 ~v~~~~~~~l~~-~a~~~LtGG~dg~--~t~~dy~~al~~le~~---~~n~l~~~~~---d----~~~~t~~~~~ik~~r 225 (437) T protein:vir:10 159 LVEFSGTGELQP-VAGAKLTGGTDGA--ISTQDYLEYFKALETV---EFNYMALPVE---D----ASIKKAAINFIKRMR 225 (437) T ss_pred cccccccccccc-ccceeeeccccCC--CChhHHHHHHHHhccC---cceEEEecCC---C----hhHHHHHHHHHHHHH Confidence 011111111111 1234688888774 4556788888877643 3555555532 1 235677888888765 Q ss_pred C----e-EEEecccccccccccccccHHHHHHHHhhcccccchhhhccCcCcceEEEecCceeecccccCceeE--echH Q lcl|Aclame:pro 400 D----C-VAIVNPPAELMVGIPTSTAVKNIVEWRNGMTGSGEVVDNNMNISSTYAFIIGNYKYQYDKYNDINRW--VPLA 472 (663) Q Consensus 400 ~----~-~~i~d~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~p~~~~~d~~~~~~~~--~p~s 472 (663) + . .+++..+. .+++...-+.+-....| ...+ .-.. T Consensus 226 ~~~g~~~~~V~~~~~----------------------------------~d~e~Iin~~n~~~~~~----~~~~~~~~~~ 267 (437) T protein:vir:10 226 EDEGLGAQLVVADSD----------------------------------ADSEAVINVKNGVILSD----KTVIDKTKAT 267 (437) T ss_pred hccCceEEEEeCCCC----------------------------------CCCceEEEeecceeecC----cceechhhHH Confidence 4 2 34432211 01112222222222111 1111 1225 Q ss_pred HHHHHHHHhhhhccCceecccceecceeecceeeeeecChhhhhhhhhCCceEEEEeeCCCcEEEEcceecC----CCCc Q lcl|Aclame:pro 473 ADIAGLCAYTDQVSHPWMSPAGYRRGQIRNCIKLAIEPKQSMRDTMYQVAINPVTGFAGGDGFVLFGDKMAT----QVPS 548 (663) Q Consensus 473 ~~~AG~~a~~d~~~g~~~span~~~~~i~~~~~~~~~~~~~~~~~Ln~~~in~i~~~~~~~G~~~wG~rT~~----~~~~ 548 (663) +.+||++|..+ +++|+.|+.+ .++..+...+++.|++.|.++|+.++.. .+++-++++|-.|+. ..+. T Consensus 268 a~vAG~~Ag~~----~~~S~t~~~~---~~~~~v~~~~t~~e~~~~i~~G~~vl~~-~~~~v~i~~gInTltt~~~~~~~ 339 (437) T protein:vir:10 268 VWVAAASANAG----VEKSLTYEKY---EDSVDVVGRLSHTETEDALLKGQFVFTA-RRGRAVVEQDINSHVSFTIEKNQ 339 (437) T ss_pred HHHHHHhccCc----cccCcccccc---CCcccccccCCHHHHHHHHhCCcEEEEE-eCCeEEEEEccccccccCCCCCc Confidence 78899999875 7779999864 4555677789999999999999998864 454445568877763 2346 Q ss_pred cceeeehhhHHHHHHHHHHHHHH-Hhhcc-cCCHHHHHHHHHHHHHHHHHHHhcCceEEEEEEEccCCCCHHHhhCCEEE Q lcl|Aclame:pro 549 PFDRINVRRLFNMLKKNIGDTSK-YELFE-NNDAFTRQSFRMETSQYLDGIRSLGGCYDFRVVCDTTNNTPNVIDRNEFV 626 (663) Q Consensus 549 ~~~~i~vrR~~~~i~~~~~~~~~-~~v~e-pn~~~~~~~v~~~i~~~L~~l~~~gal~g~~v~~d~~~nt~~~i~~G~~~ 626 (663) +|++|.++|++|+|.+.|++... +|+++ ||+...|..++..|+.||.+|+++|+|.+|.+...+..+. .....++ T Consensus 340 ~~~ki~vir~~D~i~~di~~~~~~~yiGk~~N~~~~r~~~~~~i~~yl~~l~~~g~I~~~~~~d~~v~~~---~~~~~v~ 416 (437) T protein:vir:10 340 DFRKNRILRTLDDIVNDTRYAFSEYFLGKVSNNEDGRQAFKANRIRYFKDLEARGAIEDFKVEDIEVLRG---ELKESVV 416 (437) T ss_pred hhhhhhHHHHHHHHHHHHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCceeEEeecC---CCCCEEE Confidence 89999999999999999999877 59997 7999999999999999999999999999998877654332 2356899 Q ss_pred EEEEEEecCcceEEEEEEEEe Q lcl|Aclame:pro 627 GTIYVKPPRSINYITLNMVAT 647 (663) Q Consensus 627 ~~i~~~p~~p~e~i~~~~~~~ 647 (663) +.+.++|+.++|+|.+++... T Consensus 417 v~~~v~~~dame~iy~ti~v~ 437 (437) T protein:vir:10 417 VNVKVKPVDSMEKLYMTVTVE 437 (437) T ss_pred EEEEEEEeeeeeeEEEEEEec Confidence 999999999999999999876 No 44 >protein:vir:101326 Length: 529 # NCBI annotation: gp22 # Family: family:all:9453 # MgeID: mge:1512 # MgeName: P1 # Cross-refs: genbank:acc:YP_006525;genbank:gi:46401679;genbank:GeneID:2777386 Probab=100.00 E-value=3.7e-43 Score=253.23 Aligned_cols=491 Identities=12% Similarity=0.089 Sum_probs=310.0 Q ss_pred Cc-e-------ecCceEEEEecCC--Cc-ccccCCCceEEEeecccCCCCcceEeC--CHHHHHHHcCCcCCCchhHHHH Q lcl|Aclame:pro 1 MA-L-------LSPGIEMKETSIN--ST-VVRSATGRAAIVGKFAWGPAYEVRQVT--NEVELVDMFGSPDNVTAPYFMS 67 (663) Q Consensus 1 ~~-~-------~~PGVyveEv~~~--~~-i~~v~Ts~~afvG~~~~Gpv~~p~~i~--s~~e~~~~FG~~~~~~~~~~~~ 67 (663) |. | ..-||.|.+++-- .+ -.++.+++.|+||.|+||++++|.+|+ +|.+|.-.++++....+.-+.+ T Consensus 1 ~~~ysi~q~ig~aSGvav~pi~~d~t~~~~~g~g~~v~a~Vgif~RG~i~k~~~Vt~~n~~~~LGep~~~~~ga~~E~~~ 80 (529) T protein:vir:10 1 MSQYSIQQSLGNASGVAVSPINADATLSTGVALNSSLWAGIGVFARGKPFTVLAVTESNYEDVLGEPLKPSSGSQFEPIR 80 (529) T ss_pred CCceehhhhhhhhcccccCCcCcccccchheecCceEEEEEEEeecCCCcceEEEchhHHHHHhccccCCCcchhhhhHh Confidence 54 3 3479999999743 33 467889999999999999999999999 8999999999999999988899 Q ss_pred HHHHhcCCceEEEEEeccccccccccccccceeeeeccccccccccccccccccccccccceeeeeeecccceeeeeecc Q lcl|Aclame:pro 68 AMNFLQYGNDLRLVRVIDMEKAKNASPLVNQVSVTITTEGQGYTVGDAITVKYNNATITEAGKVTAVDSDGKIKSLFVPT 147 (663) Q Consensus 68 ~~~F~nGG~~~~vvRv~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~v~~~~~~g~~~~~~~~~ 147 (663) ..|+.-+++.|||||++..+.... .+.+. .+. . .+ ...+ T Consensus 81 h~~eA~~~~s~yVVRvv~~dak~p------~i~~~-~~~-~-------------~~--~s~~------------------ 119 (529) T protein:vir:10 81 HVYEAIQQTSGYVVRAVPDDAKFP------IIMFD-ESG-E-------------PA--YSAL------------------ 119 (529) T ss_pred hhhhhhcCCceEEEEEcccccCCc------eEEec-CCc-c-------------ch--hhcc------------------ Confidence 999887777899999987543211 00000 000 0 00 0000 Q ss_pred cchhccccccccc--ccceeceeeeecccccceeeeeecccccccccccccccccccccccccccccccccccccceeee Q lcl|Aclame:pro 148 AEIIAKTRQLGTY--PTLGDNWRIDVSGASGGSAAALALGNIVVDSGVTFGNSEDAPAVMTSPAVMEKYAKFGMPLISAV 225 (663) Q Consensus 148 ~~~~~~~~~~~t~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 225 (663) ..++. .+.+....+......+. ... T Consensus 120 --------~~s~~~~l~~G~~~~iy~~Dgd~~----------------------~s~----------------------- 146 (529) T protein:vir:10 120 --------PYGSEIELDSGEAFAIYVDDGDPC----------------------ISP----------------------- 146 (529) T ss_pred --------cccccccccccceEEEEEecCcCc----------------------cCC----------------------- Confidence 00000 00000011111100000 000 Q ss_pred cchhhccccccccccccccccccccceecccceecccceeEEEecccccccceeeec-cCCcceeeEeeeeccccccccc Q lcl|Aclame:pro 226 YPGEIGSTVEVEIVSKTAFNSGAQQTIYPFGGTRTSNARGVIQYGPMTDDQFAIIVR-RDGIVVESTVLSTRKGDRDVYG 304 (663) Q Consensus 226 ~~g~~g~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~ 304 (663) +..+++...... +.....+. ..+...+. -.+...|+|..+...++.+.++ T Consensus 147 -----~~~l~i~~~~ad----s~g~e~~~--------------------l~~~~~~~~g~~~~let~~~sl~~~a~dd~G 197 (529) T protein:vir:10 147 -----TRELTIETATAD----SAGNERFL--------------------LKLTQTTSLGVVTTLETHTVSLAEEAKDDMG 197 (529) T ss_pred -----ceEEEEEeeccc----cCCCccce--------------------eeEEEEeecCCceEEEEEEeeeeechhhhcC Confidence 000000000000 00000000 00000111 1344567888888888888888 Q ss_pred chhhhhhhhcCCCceEEEE-eeccc---CCccceeEEecCccccccc-ccchhhhHHHHHhhhhccccceeEEeeccCcC Q lcl|Aclame:pro 305 SNIFMDDYFRNGGSNFIFA-SSEGW---PAGFTGIIQLGGGTSANAD-VGADELIKGWDLFSDREALHVNLMIAGACGSD 379 (663) Q Consensus 305 ~~~~~~~~~~~~~s~~v~~-~~~~~---~~~~~~~~~l~gg~d~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 379 (663) ...++...+......+... ..+.. +........+.+|+|+..+ ....++..|+..|++. .++..+++..+. T Consensus 198 ~~~yl~svle~~s~~l~ai~~~e~~~t~~~~t~~d~~f~~GtdG~~~~i~s~~y~~A~~~L~n~-p~d~~~il~~g~--- 273 (529) T protein:vir:10 198 RLCYLPTALEARSKYLRAVVNEELISTAKVTNKKSLAFTGGTNGDQSKISTAAYLRAVKVLNNA-PYMYTAVLGLGC--- 273 (529) T ss_pred CccchhHHHhhccCceeeeeeeccccccchhhhhhhhccCCccccccccchHHHHHHHHHhcCC-cceeeeeeccCC--- Confidence 8888777765533222111 11111 1111112367788877543 4566788888888654 334444443332 Q ss_pred ChhHHHHHHHHHHHHHHhhCCeEEEecccccccccccccccHHHHHHHHhhcccccchhhhccCcCcce-EEEecCceee Q lcl|Aclame:pro 380 GAEIASTVQKYVVSLADDRQDCVAIVNPPAELMVGIPTSTAVKNIVEWRNGMTGSGEVVDNNMNISSTY-AFIIGNYKYQ 458 (663) Q Consensus 380 ~~~~~~~~~~~~~~~~~~~~~~~~i~d~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~-~~~~~p~~~~ 458 (663) ...++..+|+.+|++++ +..+.|+|.. .+++++++|.++++.... .+-+ +.+||||. . T Consensus 274 ---y~~a~I~~L~~ic~~~~-~d~f~DV~~~--------LT~~aA~~~~e~~gl~~~--------~~~~~s~y~~P~~-~ 332 (529) T protein:vir:10 274 ---YDNAAITALGKICADRL-IDGFFDVKPT--------LTYAEALPAVEDTGLLGT--------DYVSCSVYHYPFS-C 332 (529) T ss_pred ---ccHHHHHHHHHHHhhhh-hcEEEcCCCC--------cCHHHHHHHHHhcCcccc--------CceeeEEEEccee-e Confidence 22345789999997765 4445698865 478999999998764221 1112 34788887 8 Q ss_pred cccccCceeEechHHH--HHHHH--HhhhhccCceecccceecceeecc-eeeeeecChhhhhhhhhCCceEEEEeeCCC Q lcl|Aclame:pro 459 YDKYNDINRWVPLAAD--IAGLC--AYTDQVSHPWMSPAGYRRGQIRNC-IKLAIEPKQSMRDTMYQVAINPVTGFAGGD 533 (663) Q Consensus 459 ~d~~~~~~~~~p~s~~--~AG~~--a~~d~~~g~~~span~~~~~i~~~-~~~~~~~~~~~~~~Ln~~~in~i~~~~~~~ 533 (663) .||.++....+++||. +|+.. ++.-...|+|++|||+.++.|... +..-+..++-|...|-.++||+|-.-.+ + T Consensus 333 ~D~~tg~k~~~GlsG~A~~akargv~~na~v~g~hY~pAGe~r~~inr~~I~~ly~~d~~e~~~lv~~riNPV~~~~~-g 411 (529) T protein:vir:10 333 KDKWTQSRVVFGLSGVAYAAKARGVKKNSDVGGWHYSPAGEERAVIARASIQPLYPEDTPDEEAMVKGRLNKVSVGTS-G 411 (529) T ss_pred ccccccCceeeCCCcceeeccccceeecccccccccccCCCccceeecccceeccCCCccCHHHHHhhccCeeeeecc-C Confidence 9999999999999994 33321 233334456999999988755431 2233555666777899999998855433 3 Q ss_pred cEEEEcceecCCCCccceeeehhhHHHHHHHHHHHHHHHhhcccCCHHHHHHHHHHHHHHHHHHHhcCceEE-------- Q lcl|Aclame:pro 534 GFVLFGDKMATQVPSPFDRINVRRLFNMLKKNIGDTSKYELFENNDAFTRQSFRMETSQYLDGIRSLGGCYD-------- 605 (663) Q Consensus 534 G~~~wG~rT~~~~~~~~~~i~vrR~~~~i~~~~~~~~~~~v~epn~~~~~~~v~~~i~~~L~~l~~~gal~g-------- 605 (663) ++.+-.+-|+...++.|||+|+++|+++|++.+.+..+|.+|||++..+|. +++.++.+|..+|+.|+|++ T Consensus 412 ~~~idDsLt~~~knny~R~~hv~~lmn~I~~~~~k~a~~~~~~Pd~it~~g-l~~~l~~~L~r~~asgalv~prdp~~~G 490 (529) T protein:vir:10 412 QMIIDDALTCCTQDNYLHFQHVPSLMNAISRFFVQLARQMKHSPDGITAAG-LTKGMTKLLDRFVASGALVAPRDPDADG 490 (529) T ss_pred cceeeeeeceeeeCCchhhhhHHHHHHHHHHHHHHHHHHHhhCCChHHHHH-HHHhHHHHHHHHHhcCceecccCccCCC Confidence 454433344444567999999999999999999999999999999999997 99999999999999999986 Q ss_pred ---EEEEEccCCCCHHHhhCCEEEEEEEEEecCcceEEEEEEEEee Q lcl|Aclame:pro 606 ---FRVVCDTTNNTPNVIDRNEFVGTIYVKPPRSINYITLNMVATS 648 (663) Q Consensus 606 ---~~v~~d~~~nt~~~i~~G~~~~~i~~~p~~p~e~i~~~~~~~~ 648 (663) |++.+ +|.| .++|.|++.++|.-.+++|.+.-.-.+ T Consensus 491 ~epy~~~V-----~q~d--~D~~~v~~~~~ptGv~Rri~~~p~l~~ 529 (529) T protein:vir:10 491 TEPYVLKV-----TQAE--FDKWEVVWACCPTGVARRIQGVPLLIK 529 (529) T ss_pred CCceEEEE-----eecc--cCeEEEEEEeecCCceeeEEeeeeecC Confidence 77766 3444 489999999999999999988766555 No 45 >protein:vir:105470 Length: 451 # NCBI annotation: putative phage sheath tail protein # Family: family:all:632 # MgeID: mge:1502 # MgeName: KC5a # Cross-refs: genbank:acc:YP_529880;genbank:gi:90592620;genbank:GeneID:3974534 Probab=100.00 E-value=8.8e-41 Score=240.17 Aligned_cols=423 Identities=16% Similarity=0.143 Sum_probs=256.1 Q ss_pred CceecCceEEEEecCCC-cccccCCCceEEEeecc-cCCCCcceEeCCHHHHHHHcCCcCCCchhHHHHHHHHhcCCceE Q lcl|Aclame:pro 1 MALLSPGIEMKETSINS-TVVRSATGRAAIVGKFA-WGPAYEVRQVTNEVELVDMFGSPDNVTAPYFMSAMNFLQYGNDL 78 (663) Q Consensus 1 ~~~~~PGVyveEv~~~~-~i~~v~Ts~~afvG~~~-~Gpv~~p~~i~s~~e~~~~FG~~~~~~~~~~~~~~~F~nGG~~~ 78 (663) +.=.-|||||||++.+. ++.+++|++++|+|.+. ||| ++|+.|.|+.||++.||......- +.+++ +|++||++| T Consensus 9 ~~K~~PGvYi~~~~~~~~~~~~~~~~~~~~i~~~~~~g~-~~~v~i~~~~d~~~~fG~~~~~~~-~~~~~-~~~~g~~~v 85 (451) T protein:vir:10 9 QDKRRPGTYINVVGNGQREAASSLGRVLLIRDKGLGWGK-NGVIEVEANSDFTKKLGTTLDDPS-LTALK-ETLKGASKV 85 (451) T ss_pred ceeecCceEEEEeccCcceeeccCCcEEEEEeeecCCCC-cccEEeecHHHHHHHcCCcccchh-HHHHH-HHhcCCcEE Confidence 33456999999999875 68999999999999765 666 789999999999999997443321 12444 555799999 Q ss_pred EEEEeccccccccccccccceeeeeccccccccccccccccccccccccceeeeeeecccceeeeeecccchhccccccc Q lcl|Aclame:pro 79 RLVRVIDMEKAKNASPLVNQVSVTITTEGQGYTVGDAITVKYNNATITEAGKVTAVDSDGKIKSLFVPTAEIIAKTRQLG 158 (663) Q Consensus 79 ~vvRv~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~v~~~~~~g~~~~~~~~~~~~~~~~~~~~ 158 (663) |+.|+.++..+... ... T Consensus 86 ~~yrl~~g~~a~~t----------~~~----------------------------------------------------- 102 (451) T protein:vir:10 86 LVLNPNEGTAATLT----------KEG----------------------------------------------------- 102 (451) T ss_pred EEEEcCCCceEEEE----------eec----------------------------------------------------- Confidence 99998654211000 000 Q ss_pred ccccceeceeeeecccccceeeeeecccccccccccccccccccccccccccccccccccccceeeecchhhcccccccc Q lcl|Aclame:pro 159 TYPTLGDNWRIDVSGASGGSAAALALGNIVVDSGVTFGNSEDAPAVMTSPAVMEKYAKFGMPLISAVYPGEIGSTVEVEI 238 (663) Q Consensus 159 t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~g~~g~~v~v~~ 238 (663) ....+.+.++|.+||.+++.+ T Consensus 103 -----------------------------------------------------------~~~~~~Aky~G~~Gn~i~v~v 123 (451) T protein:vir:10 103 -----------------------------------------------------------LPWTVTANYPGEKGNQITVSV 123 (451) T ss_pred -----------------------------------------------------------CceEEEEeeCCcCCceEEEEE Confidence 000023556677777766654 Q ss_pred ccccccccccccceecccceecccceeEEEecccccccceeeeccCCcceeeEeeeecccccccccchhhhhhhhcCCCc Q lcl|Aclame:pro 239 VSKTAFNSGAQQTIYPFGGTRTSNARGVIQYGPMTDDQFAIIVRRDGIVVESTVLSTRKGDRDVYGSNIFMDDYFRNGGS 318 (663) Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s 318 (663) .....- +..+.+.+..++...+...+.... .. ....+ T Consensus 124 ~~~~~d-----------------------------~~~~~v~t~~g~~~vd~qtv~~~~-----------~~---el~~n 160 (451) T protein:vir:10 124 EVSPAD-----------------------------QNAATVSTIFGTKLVDEQSIKFNE-----------LD---KFKGN 160 (451) T ss_pred ecccCC-----------------------------cCceEEEEEECCeEEEEEEeeccc-----------hh---hccCC Confidence 321100 000111111111111111110000 00 01112 Q ss_pred eEEEEee--cccCCccceeEEecCc-ccccccccchhhhHHHHHhhhhccccceeEEeeccCcCChhHHHHHHHHHHHHH Q lcl|Aclame:pro 319 NFIFASS--EGWPAGFTGIIQLGGG-TSANADVGADELIKGWDLFSDREALHVNLMIAGACGSDGAEIASTVQKYVVSLA 395 (663) Q Consensus 319 ~~v~~~~--~~~~~~~~~~~~l~gg-~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 395 (663) .++.... ...+.. .....+.++ ..+....+..++..+++.++. +..+.+.++....+ ..++..+.+|| T Consensus 161 d~V~a~~~~~g~~~~-~~~~~l~~~~~gg~~~~~~~~~~~~l~~~e~---~~~n~l~~~~~~~~-----~~i~~~~~a~i 231 (451) T protein:vir:10 161 DYITAKVVEEGSSKP-VAFTNVSGTLTGGTTTESNKVESLLNDALEN---EEYAVVTTAGFEPS-----SNMNKLVVEAV 231 (451) T ss_pred ceEEEEecccccccc-eeeeecccccccccccCCccchHHHHHHhcc---ceeeEEEEccCCCc-----hHHHHHHHHHH Confidence 2332221 111111 112223322 222223344555556555544 34555555543222 22456677888 Q ss_pred HhhCC-----eEEEecccccccccccccccHHHHHHHHhhcccccchhhhccCcCcceEEEecCceeecccccCceeEec Q lcl|Aclame:pro 396 DDRQD-----CVAIVNPPAELMVGIPTSTAVKNIVEWRNGMTGSGEVVDNNMNISSTYAFIIGNYKYQYDKYNDINRWVP 470 (663) Q Consensus 396 ~~~~~-----~~~i~d~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~p~~~~~d~~~~~~~~~p 470 (663) +++|+ +.+++..+.... ++.+...-+.+.+...| . +.++ T Consensus 232 k~~r~~~g~~~~aVl~~~~~~~-------------------------------~d~egiinv~n~~~~~d----g-~~~~ 275 (451) T protein:vir:10 232 KRLRENEGRKVRGVIPTDADTT-------------------------------YNYEGISTVVNGYTLSD----G-TNVD 275 (451) T ss_pred HHHHHhcCCeEEEEecCccCCC-------------------------------CCCcceEEeecceEecC----c-eeec Confidence 87653 356664322110 12223333333332222 1 1223 Q ss_pred h---HHHHHHHHHhhhhccCceecccceecceeecceeeeeecChhhhhhhhhCCceEEEEeeCCCcEE-EEcceecC-- Q lcl|Aclame:pro 471 L---AADIAGLCAYTDQVSHPWMSPAGYRRGQIRNCIKLAIEPKQSMRDTMYQVAINPVTGFAGGDGFV-LFGDKMAT-- 544 (663) Q Consensus 471 ~---s~~~AG~~a~~d~~~g~~~span~~~~~i~~~~~~~~~~~~~~~~~Ln~~~in~i~~~~~~~G~~-~wG~rT~~-- 544 (663) + .+.+||++|..+ +.+|+.|+. +.++..+...+++.|++.+.++|+.+++...+ ++++ ++|-.|+. T Consensus 276 ~~~~~~~vAG~~Ag~~----~~~S~T~~~---~~~~~~v~~~~t~~e~~~~i~~G~lvl~~~~g-~~v~i~~~INTltt~ 347 (451) T protein:vir:10 276 VKDATGYFAGISASAD----VATSLTYFE---VEDAVSAYPKFDNEKTIKALDAGQIVFTTRPG-QRVVIEQDINSLHKF 347 (451) T ss_pred hhhhHHHHHHHHcccc----cccCcccee---cCCceeeeeeCCHHHHHHHHhCCeEEEEEEcC-CeEEEEEccccceec Confidence 3 478999999875 667999985 45566778899999999999999988765454 4554 58877763 Q ss_pred --CCCccceeeehhhHHHHHHHHHHHHHHH-hhc-ccCCHHHHHHHHHHHHHHHHHHHhcCceEEEEEEEccCCCCHHHh Q lcl|Aclame:pro 545 --QVPSPFDRINVRRLFNMLKKNIGDTSKY-ELF-ENNDAFTRQSFRMETSQYLDGIRSLGGCYDFRVVCDTTNNTPNVI 620 (663) Q Consensus 545 --~~~~~~~~i~vrR~~~~i~~~~~~~~~~-~v~-epn~~~~~~~v~~~i~~~L~~l~~~gal~g~~v~~d~~~nt~~~i 620 (663) ..+.+|++|.++|++|+|.+.+++.... |++ -||+..-|..++..|..||.+|+++|+|..|.. .|.+.. .-- T Consensus 348 ~~~k~~~~~ki~vir~~D~i~~di~~~~~~~yiGk~~N~~~gr~~~~~~i~~yl~~l~~~g~i~~~~~-~d~~v~--~~~ 424 (451) T protein:vir:10 348 TAEKPQAFSKNRVIRTLDEIATNTENTFERTYLGNVGNNAAGRDLFKADRIAYLTSLQNRNMIQSFAN-TDITVE--AGN 424 (451) T ss_pred CCCCCcchhhhhHHHHHHHHHHHHHHHhhhccceecCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCc-cceEEe--ecC Confidence 2345899999999999999999999864 888 569999999999999999999999999998762 221111 112 Q ss_pred hCCEEEEEEEEEecCcceEEEEEEEEe Q lcl|Aclame:pro 621 DRNEFVGTIYVKPPRSINYITLNMVAT 647 (663) Q Consensus 621 ~~G~~~~~i~~~p~~p~e~i~~~~~~~ 647 (663) ....+++.+.++|+..+|+|.+++... T Consensus 425 ~~~~v~v~~~v~pvdame~iy~t~~v~ 451 (451) T protein:vir:10 425 DMDSIVVNLAVTPVDAMEKLYMTMVVR 451 (451) T ss_pred CCCEEEEEEEEEEEeeeeeEEEEEEEc Confidence 357899999999999999999998876 No 46 >protein:vir:7653 Length: 581 # NCBI annotation: gp124 # Family: family:all:1196 # MgeID: mge:148 # MgeName: Bxz1 # Cross-refs: genbank:acc:NP_818197;genbank:gi:29566631;genbank:GeneID:1259809 Probab=100.00 E-value=2.2e-37 Score=221.58 Aligned_cols=540 Identities=11% Similarity=0.008 Sum_probs=238.5 Q ss_pred cceEe---CCHHHHHHHcCCcCCCch--hH--HHHHHHHh-cCCceEEEEEeccccccccccccccceeeeecccccccc Q lcl|Aclame:pro 40 EVRQV---TNEVELVDMFGSPDNVTA--PY--FMSAMNFL-QYGNDLRLVRVIDMEKAKNASPLVNQVSVTITTEGQGYT 111 (663) Q Consensus 40 ~p~~i---~s~~e~~~~FG~~~~~~~--~~--~~~~~~F~-nGG~~~~vvRv~~~~~~~~a~~~~~~~~~~~~~~~~~~~ 111 (663) ..+-+ +.-.+|-..||.+..... .+ .-+.+.+. ..|.+|- +|.-......+. .- T Consensus 1 ~~~~~~~~~~~~~~t~~~~~~~~g~~~~~~~~~~i~g~~~g~~g~~~s-~r~~p~~~~~~e-----vq------------ 62 (581) T protein:vir:76 1 MAIDFSQYQTPGVYTEAVGAPQLGIRSSVPTAVAIFGTAVGYQTYRES-IRINPDTGETIT-----TQ------------ 62 (581) T ss_pred CcccccccccchhhhhhccccccCcceeeeeeeeecccccccccccce-eeecCCCCCCCc-----eE------------ Confidence 11111 112233333333222110 00 00011111 0122232 222111000000 00 Q ss_pred ccccccccccccccccceeeeeeecccceeeeeecccchhcccccccccccceeceeeeecccccceeeeeecccccc-- Q lcl|Aclame:pro 112 VGDAITVKYNNATITEAGKVTAVDSDGKIKSLFVPTAEIIAKTRQLGTYPTLGDNWRIDVSGASGGSAAALALGNIVV-- 189 (663) Q Consensus 112 ~~~~i~v~~~~~~~~~~~~v~~~~~~g~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 189 (663) .+.+.....+. .+++........... ..++...+...... -+... .....+.... .........+... T Consensus 63 ---~v~~~~~~t~G--~ftLt~~g~tT~~I~-~~asa~~v~~AL~~--L~~i~-~~~v~vtg~~-~~~~~V~F~g~~~~~ 132 (581) T protein:vir:76 63 ---ILALVGEPTGG--SFKLSLAGEPTGNIP-FNATQGQVQSALRA--LPNVE-DDEVTVLGDP-GGPWTVTFTKAVAAL 132 (581) T ss_pred ---EEEEeecCCcc--eEEEEeCceeccccc-cCCCHHHHHHHHhh--ccCCC-CceEEEEcCC-CceEEEEEcCCccce Confidence 00000000000 011110000000000 00000000000000 00000 0000111100 0011111110000 Q ss_pred --cccccccccccccccccccccccccccccccc--eeeecchhhccccccccc-cccccccccccceecccceecccce Q lcl|Aclame:pro 190 --DSGVTFGNSEDAPAVMTSPAVMEKYAKFGMPL--ISAVYPGEIGSTVEVEIV-SKTAFNSGAQQTIYPFGGTRTSNAR 264 (663) Q Consensus 190 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~a~~~g~~g~~v~v~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (663) +.....+..... ..+ .....+.+. ......|..+.++...-. ....... ......++.... T Consensus 133 ~~~~~~ltg~~~~~------~~V--~~~~~G~~~~~~~l~~~g~~~~~~~~~~s~~~~~~~l-----~~~~~~~~~~~~- 198 (581) T protein:vir:76 133 TKDVTGLTGGDNPD------LNI--ASEQTGVPAMNRALAKKGIKTDTIRVVNPNSGQVYVL-----GTDYVVTRVNAG- 198 (581) T ss_pred eEeeeeeecCCcce------eEE--EEEecCcCCcCceeeeccccccccceeecCCcceeee-----cccccceeeccC- Confidence 000000000000 000 000000000 000000000000000000 0000000 000000000000 Q ss_pred eEEEecccccccceeeeccCCc------------------ceeeEeeeecccccccccchhhhhhhhcCCCceEEEEeec Q lcl|Aclame:pro 265 GVIQYGPMTDDQFAIIVRRDGI------------------VVESTVLSTRKGDRDVYGSNIFMDDYFRNGGSNFIFASSE 326 (663) Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~g~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~v~~~~~ 326 (663) ........++.+.++...++. ..+...+. +............+...+..+++...... T Consensus 199 -~~~~~~~~~~~~t~~~~~~g~~~~~~~i~~~~~~~~D~~~~~~v~~~---~~~~~~~~~~~~~~~~g~~~~e~~~~~~~ 274 (581) T protein:vir:76 199 -EDGEANTRDDLYTIQRVVDGGHIDPGDIVQLSYRYTDPNYHEVIRFT---DPDDIQDFYGPAFDEAGNVQSEITLCAQL 274 (581) T ss_pred -cccceeeeeeeeeeEeecccccccceeEEEEEEEeecCCccceEEEe---cccccccceeeehhhcCccccchhhhhhe Confidence 000000000111111111111 00111000 00000000000001001111111111000 Q ss_pred ccCCccceeEEecCcccccc-cccchhhhHHHHHhhhhccccceeEEeeccCcCChhHHHHHHHHHHHHHHhhC----Ce Q lcl|Aclame:pro 327 GWPAGFTGIIQLGGGTSANA-DVGADELIKGWDLFSDREALHVNLMIAGACGSDGAEIASTVQKYVVSLADDRQ----DC 401 (663) Q Consensus 327 ~~~~~~~~~~~l~gg~d~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~ 401 (663) .. + ......+.++.++.. .++..+|..+|+.++..+.. .++++.. .+ .+++..+.+||++++ ++ T Consensus 275 ~~-t-~~~~~~l~~gvd~~g~tvt~~dy~~aL~ale~~~~~---~ivvp~t--~~----~~i~a~l~ahv~~~s~~~~~~ 343 (581) T protein:vir:76 275 AI-T-NGASTILACAVDPEGDTVTMGDYQNALNKFRDEDEI---AIIVAGT--GA----QPIQALVQQHVSAQSNNKYER 343 (581) T ss_pred ee-c-cccceEEEeeecCCCCccchHHHHHHHHHHhcCCeE---EEEEecC--CC----hHHHHHHHHHHHHHHhccCCc Confidence 00 0 111234556666533 36778899999888875432 2233321 11 235666777776552 34 Q ss_pred EEEecccccccccccccccHHHHHHHHhhcccccchhhhccCcCcceEEEecCceeecccccCceeEechHHHHHHHHHh Q lcl|Aclame:pro 402 VAIVNPPAELMVGIPTSTAVKNIVEWRNGMTGSGEVVDNNMNISSTYAFIIGNYKYQYDKYNDINRWVPLAADIAGLCAY 481 (663) Q Consensus 402 ~~i~d~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~p~~~~~d~~~~~~~~~p~s~~~AG~~a~ 481 (663) .+++..+... .....+.+++. ...++|+|..+++||..+.+..........|..++|+.+|. T Consensus 344 ra~igv~g~~-----~~~~~~~~~~~-------------a~~~ns~Rvvlv~p~~~~~~g~~~~~~~~lp~~~~AA~vAG 405 (581) T protein:vir:76 344 RAILGMDGSV-----TPVPSATRIAN-------------AQSIKDQRVALISPSSFVYYAPELNREVVLGGQFMAAAVAG 405 (581) T ss_pred eEEEEeeCCC-----CCchHHHHHHh-------------hcccCCCcEEEEEcCceEeccccCCcceecchhhhhhhHHh Confidence 4555433211 11222333322 23478999999999999887764443333344555666666 Q ss_pred hhhccCceecccceecceeecceeeeeecChhhhhhhhhCCceEEEEeeCCCcEE-EEcceecCCCCccceeeehhhHHH Q lcl|Aclame:pro 482 TDQVSHPWMSPAGYRRGQIRNCIKLAIEPKQSMRDTMYQVAINPVTGFAGGDGFV-LFGDKMATQVPSPFDRINVRRLFN 560 (663) Q Consensus 482 ~d~~~g~~~span~~~~~i~~~~~~~~~~~~~~~~~Ln~~~in~i~~~~~~~G~~-~wG~rT~~~~~~~~~~i~vrR~~~ 560 (663) +.....+++||.|+++. ++..+...+++.|++.|+++|+++++.+++ ++++ +||-+|+.+++ +|+++++||++| T Consensus 406 ~~a~~~~~~slT~~~i~---g~~~~~~~~s~~e~e~ll~~Gv~~l~~~~~-~~v~Iv~gItT~~s~~-~~k~i~viR~~D 480 (581) T protein:vir:76 406 KSVSAIAAMPLTRKVIR---GFSGPAEVQRDGEKSRESSEGLMVIEKTPR-NLVHVRHGVTTDPTSL-HTREWNIIGQQD 480 (581) T ss_pred hhhccccccCccccccc---ccccccccCCHHHHHHHHhCCeEEEEEecC-CeEEEEEeeecCCCCC-ccceeeehhhhH Confidence 66677799999999754 556688889999999999999999998886 6776 58888887665 799999999999 Q ss_pred HHHHHHHHHHH--HhhcccCCHHHHHHHHHHHHHHHHHHHhcCceEEEEEEEccCCCCHHHhhCCEEEEEEEEEecCcce Q lcl|Aclame:pro 561 MLKKNIGDTSK--YELFENNDAFTRQSFRMETSQYLDGIRSLGGCYDFRVVCDTTNNTPNVIDRNEFVGTIYVKPPRSIN 638 (663) Q Consensus 561 ~i~~~~~~~~~--~~v~epn~~~~~~~v~~~i~~~L~~l~~~gal~g~~v~~d~~~nt~~~i~~G~~~~~i~~~p~~p~e 638 (663) ++++.+++.++ +|++|||++.+|.+||..+..||.+||+.|+|.||... ..++.+++.++++|++.++|++|+| T Consensus 481 ~v~~~vr~~~~~~~fiG~~n~~~~r~~ik~~i~~~L~~l~~~g~I~g~~~~----~~~~~~~~~d~v~V~i~v~Pv~~ie 556 (581) T protein:vir:76 481 VMVYRIRDYLDADGLIGMPIYDTTIVQVKASAEAALVWLVDNNIIRGYRNL----KARQIERQPDVIEVRYEWRPAYPLN 556 (581) T ss_pred HHHHHHHHHHhhhcCCCcccChHHHHHHHHHHHHHHHHHHhcCcccCcccc----eeeEEecCCCEEEEEEEEEecccce Confidence 99999999976 58889999999999999999999999999999998632 3355667889999999999999999 Q ss_pred EEEEEEEEeecccchhhhhhhhhcC Q lcl|Aclame:pro 639 YITLNMVATSTGANFDELIGPMQLA 663 (663) Q Consensus 639 ~i~~~~~~~~~~~~~~e~~~~~~~~ 663 (663) ||++++.++..+-.|...|+----= T Consensus 557 ~I~vt~~~~p~~~~~~~~~~~~~~~ 581 (581) T protein:vir:76 557 YIVVRYSIAPETGDITSTIEGTTSF 581 (581) T ss_pred EEEEEEEEeeCCCceEEEEeccccC Confidence 9999999988766665554321111 No 47 >protein:vir:107310 Length: 581 # NCBI annotation: gp123 # Family: family:all:1196 # MgeID: mge:1550 # MgeName: Catera # Cross-refs: genbank:acc:YP_656131;genbank:gi:109393333;genbank:GeneID:4156791 Probab=100.00 E-value=2.7e-36 Score=215.56 Aligned_cols=542 Identities=11% Similarity=0.019 Sum_probs=238.4 Q ss_pred cceEeCC---HHHHHHHcCCcCCCc--hhHHHH--HHHHh-cCCceEEEEEeccccccccccccccceeeeecccccccc Q lcl|Aclame:pro 40 EVRQVTN---EVELVDMFGSPDNVT--APYFMS--AMNFL-QYGNDLRLVRVIDMEKAKNASPLVNQVSVTITTEGQGYT 111 (663) Q Consensus 40 ~p~~i~s---~~e~~~~FG~~~~~~--~~~~~~--~~~F~-nGG~~~~vvRv~~~~~~~~a~~~~~~~~~~~~~~~~~~~ 111 (663) ..+.+.- -.||-..|+.+.-.. ..++++ .+.+- --|.+|..-.+..... .+. .- T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~g~~~g~~g~~~s~~~~p~~~~-~~e-----~q------------ 62 (581) T protein:vir:10 1 MAIDFSQYQTPGVYTEAVGAPQLGIRSSVPTAVAIFGTAVGYQTYRESIRINPDTGE-TIT-----TQ------------ 62 (581) T ss_pred CeeeeccccccchhhhhccccccceeeeeccccccccccccccccccccccCCCCCC-ccc-----eE------------ Confidence 3333311 223344443332110 011111 11111 0122333222221100 000 00 Q ss_pred ccccccccccccccccceeeeeeecccceeeeeecccchhcccccccccccceeceeeeecccccceeeeeecccccccc Q lcl|Aclame:pro 112 VGDAITVKYNNATITEAGKVTAVDSDGKIKSLFVPTAEIIAKTRQLGTYPTLGDNWRIDVSGASGGSAAALALGNIVVDS 191 (663) Q Consensus 112 ~~~~i~v~~~~~~~~~~~~v~~~~~~g~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (663) .+.+.....+....+.+.+ ...... ...++...+..+... -+... .....+.... .........+..... T Consensus 63 ---~v~~~~~~t~GtFtLsf~G--~tT~~I-~~~asa~~v~~AL~~--L~~i~-~~~v~v~g~~-g~~~~VtF~g~~~~l 132 (581) T protein:vir:10 63 ---ILALVGEPTGGSFKLSLAG--EPTGNI-PFNATQGQVQSALRA--LPNVE-DDEVTVLGDP-GGPWTVTFTKAVAAL 132 (581) T ss_pred ---EEEEEecCCCceEEEEeCc--eecccc-cccCCHHHHHHHHhc--cCCCC-cceEEEECCC-CceEEEEEcCCccce Confidence 0000000000001111100 000000 000010000000000 00000 0001111111 001111111000000 Q ss_pred cccccccccccccccccccccccccccccceeeecchhhccccccccccccc----cccccccceecccceecccceeEE Q lcl|Aclame:pro 192 GVTFGNSEDAPAVMTSPAVMEKYAKFGMPLISAVYPGEIGSTVEVEIVSKTA----FNSGAQQTIYPFGGTRTSNARGVI 267 (663) Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~g~~g~~v~v~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~ 267 (663) ......+.. +.....++. ....+...... ....-+-........... ...+.............. T Consensus 133 ~~~~~~lt~--g~~~~vtV~--~~~~g~~~~~~-~~s~~gi~~~~~~l~~~~~~~~~~~gsd~~~~~~~~~~~~------ 201 (581) T protein:vir:10 133 TKDVTGLTG--GDDPDLNIA--SEQTGVPAMNR-ALAKKGIKTDTIRVVNPNSGQVYVLGTDYVVTRVNAGEDG------ 201 (581) T ss_pred eeeeceecC--CCceeEEEe--ccccCcccccc-cccccccccccccccccccCcceeccccceeeecccCccc------ Confidence 000000000 000000000 00000000000 000000000000000000 000000000000000000 Q ss_pred EecccccccceeeeccCCcceeeEe---ee---ecc---------cccccccchhhhhhhhcCCCceEEEEeecccCCcc Q lcl|Aclame:pro 268 QYGPMTDDQFAIIVRRDGIVVESTV---LS---TRK---------GDRDVYGSNIFMDDYFRNGGSNFIFASSEGWPAGF 332 (663) Q Consensus 268 ~~~~~~~~~~~~~~~~~g~~~~~~~---~~---~~~---------~~~~~~~~~~~~~~~~~~~~s~~v~~~~~~~~~~~ 332 (663) .....++..+++....+....+.. +. .++ +.+..........+...+..+++..... ...+. T Consensus 202 -~~~~~~D~~t~~~~~~g~~~~~~~v~~~~~~~~d~~~~~~v~~~~~~~~~~~~~~~~~~~g~~~~~~t~~~~-~~~tn- 278 (581) T protein:vir:10 202 -EANTRDDLYTIQRVVDGGHIDPGDIVQLSYRYTDPNYHEVIRFTDPDDIQDFYGPAFDEAGNVQSEITLCAQ-LAITN- 278 (581) T ss_pred -cccccccceeeeeeecccccccceEEEEEEEeecCCcceeEEeecCcchhhhhhhhhhccCccccchhhhhe-eeeec- Confidence 000011111111111111100000 00 000 0000000000001110111111111100 00111 Q ss_pred ceeEEecCcccccc-cccchhhhHHHHHhhhhccccceeEEeeccCcCChhHHHHHHHHHHHHHHhhC----CeEEEecc Q lcl|Aclame:pro 333 TGIIQLGGGTSANA-DVGADELIKGWDLFSDREALHVNLMIAGACGSDGAEIASTVQKYVVSLADDRQ----DCVAIVNP 407 (663) Q Consensus 333 ~~~~~l~gg~d~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~i~d~ 407 (663) .....+.++.++.. .++..+|..+++.|+..+.. .++++.. .+ .+++.++.+||+++. ++.+++.. T Consensus 279 ~~~~~l~~gvd~~g~tvt~~dy~~Al~ale~~~~~---~ivv~~t--~~----~~v~a~l~ahv~~~s~~~~~~ravigV 349 (581) T protein:vir:10 279 GASTILACAVDPEGDTVTMGDYQNALNKFRDEDEI---AIIVAGT--GA----QPIQALVQQHVSAQSNNKYERRAILGM 349 (581) T ss_pred ccceeEEeeccCCCCccchHHHHHHHHHHhcCCce---EEEEeCC--CC----HHHHHHHHHHHHHHHhccCCcEEEEEe Confidence 11233455555433 35677899999888875432 2333321 11 346677888887653 45555554 Q ss_pred cccccccccccccHHHHHHHHhhcccccchhhhccCcCcceEEEecCceeeccccc-CceeEech---HHHHHHHHHhhh Q lcl|Aclame:pro 408 PAELMVGIPTSTAVKNIVEWRNGMTGSGEVVDNNMNISSTYAFIIGNYKYQYDKYN-DINRWVPL---AADIAGLCAYTD 483 (663) Q Consensus 408 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~p~~~~~d~~~-~~~~~~p~---s~~~AG~~a~~d 483 (663) +... .....+.+++. ...++++|..+++|+..+.+... +....+|+ ++++||+++.. T Consensus 350 ~g~~-----~~~~~~~~~~~-------------a~~~n~~Rvvlv~p~~~~~~g~~~~~~v~lp~y~~AA~vAGl~a~~- 410 (581) T protein:vir:10 350 DGSV-----TPVPSATRIAN-------------AQSIKDQRVALISPSSFVYYAPELNREVVLGGQFMAAAVAGKSVSA- 410 (581) T ss_pred cCCC-----CCccHHHHHHh-------------hccCCCceEEEEecCceeecCcccCceeccchhhHHHHHHHHhhcc- Confidence 3221 11222332322 23578999999999998877654 44555666 45566666655 Q ss_pred hccCceecccceecceeecceeeeeecChhhhhhhhhCCceEEEEeeCCCcEEE-EcceecCCCCccceeeehhhHHHHH Q lcl|Aclame:pro 484 QVSHPWMSPAGYRRGQIRNCIKLAIEPKQSMRDTMYQVAINPVTGFAGGDGFVL-FGDKMATQVPSPFDRINVRRLFNML 562 (663) Q Consensus 484 ~~~g~~~span~~~~~i~~~~~~~~~~~~~~~~~Ln~~~in~i~~~~~~~G~~~-wG~rT~~~~~~~~~~i~vrR~~~~i 562 (663) .+++||.|+++. ++..+...+++.|++.|+++|+++++.+++ +++++ ||-+|+.+++ +|++|++||++|++ T Consensus 411 ---~~~~slT~~~i~---gi~~l~~~~s~~e~e~ll~~Gv~~l~~~~~-~~v~Iv~gItT~~s~~-~~~~i~~iR~~D~v 482 (581) T protein:vir:10 411 ---IAAMPLTRKVIR---GFSGPAEVQRDGEKSRESSEGLMVIEKTPR-NLVHVRHGVTTDPTSL-HTREWNIIGQQDVM 482 (581) T ss_pred ---ccccCccccccc---ccccccccCCHHHHHHHHhCCeEEEEEecC-CeEEEEeeeecCCCCC-cceeeeeehhhhHH Confidence 488899999755 445678889999999999999999998886 67876 6667877665 79999999999999 Q ss_pred HHHHHHHHH--HhhcccCCHHHHHHHHHHHHHHHHHHHhcCceEEEEEEEccCCCCHHHhhCCEEEEEEEEEecCcceEE Q lcl|Aclame:pro 563 KKNIGDTSK--YELFENNDAFTRQSFRMETSQYLDGIRSLGGCYDFRVVCDTTNNTPNVIDRNEFVGTIYVKPPRSINYI 640 (663) Q Consensus 563 ~~~~~~~~~--~~v~epn~~~~~~~v~~~i~~~L~~l~~~gal~g~~v~~d~~~nt~~~i~~G~~~~~i~~~p~~p~e~i 640 (663) ++.+++.++ +|++|||++.+|.+||..+..||.+||++|+|.||... ..++.+.+.++++|+|.++|++|+||| T Consensus 483 ~~~ir~~~~~~~fIG~~n~~~~r~~ik~~i~~~L~~l~~~g~I~~~~~~----~~~~~~~~~d~v~V~i~v~Pv~~i~~I 558 (581) T protein:vir:10 483 VYRIRDYLDADGLIGMPIYDTTIVQVKASAEAALVWLVDNNIIRGYRNL----KARQIERQPDVIEVRYEWRPAYPLNYI 558 (581) T ss_pred HHHHHHHhhhhcCCCcccCHHHHHHHHHHHHHHHHHHHhcCcccCCccc----eeeeeecCCCEEEEEEEEEecccceEE Confidence 999999975 58999999999999999999999999999999998643 235556788999999999999999999 Q ss_pred EEEEEEeecccchhhhhhhhhcC Q lcl|Aclame:pro 641 TLNMVATSTGANFDELIGPMQLA 663 (663) Q Consensus 641 ~~~~~~~~~~~~~~e~~~~~~~~ 663 (663) ++|++++..+-.|...|+----= T Consensus 559 ~vti~~~p~~~~~~~~~~~~~~~ 581 (581) T protein:vir:10 559 VVRYSIAPETGDITSTIEGTTSF 581 (581) T ss_pred EEEEEEecCCCceEEEEeccccC Confidence 99999998776666554422111 No 48 >protein:vir:78986 Length: 436 # NCBI annotation: putative sheath tail protein # Family: family:all:632 # MgeID: mge:1861 # MgeName: phiC2 # Cross-refs: genbank:acc:YP_001110731;genbank:gi:134287348;genbank:GeneID:4955160 Probab=99.95 E-value=3.6e-27 Score=165.58 Aligned_cols=406 Identities=18% Similarity=0.146 Sum_probs=245.4 Q ss_pred Cce----------ecCceEEEEecCCC-cccccCCCceEEEeecccCCCCcceEeCC---HHHHHHHcCCcCCCchhHHH Q lcl|Aclame:pro 1 MAL----------LSPGIEMKETSINS-TVVRSATGRAAIVGKFAWGPAYEVRQVTN---EVELVDMFGSPDNVTAPYFM 66 (663) Q Consensus 1 ~~~----------~~PGVyveEv~~~~-~i~~v~Ts~~afvG~~~~Gpv~~p~~i~s---~~e~~~~FG~~~~~~~~~~~ 66 (663) |++ .-||+|++-++... .+.+....+.++...+.|||+++++.|++ ..++...||.. ...+.... T Consensus 1 ~~magg~~~~~~K~~PG~Y~n~~~~~~~~~~~~~rGi~a~p~~~~wGp~~~v~~i~~~~~~~~~~~~~G~~-~~~~~~~~ 79 (436) T protein:vir:78 1 MALGGGTFVTQNKVLPGSYINFVSATRATSSLSDRGIVAMPLELDWGIDEEVFQVTSDDFEKYSTKYFGYD-YTHEKLKG 79 (436) T ss_pred CcccceeeccceeecCceEEEEEecCcceeeccCCeEEEEEEEecCCCCceeEEeecccchHHHHHHhcCc-cchHHHHH Confidence 332 35999999997654 58899999999999999999999999998 56899999953 33333345 Q ss_pred HHHHHhcCCceEEEEEeccccccccccccccceeeeeccccccccccccccccccccccccceeeeeeecccceeeeeec Q lcl|Aclame:pro 67 SAMNFLQYGNDLRLVRVIDMEKAKNASPLVNQVSVTITTEGQGYTVGDAITVKYNNATITEAGKVTAVDSDGKIKSLFVP 146 (663) Q Consensus 67 ~~~~F~nGG~~~~vvRv~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~v~~~~~~g~~~~~~~~ 146 (663) ++..| .|++.+|+.|+.++..+... .+ T Consensus 80 l~~~~-~~~~tv~~yrl~~G~~a~~~-------v~--------------------------------------------- 106 (436) T protein:vir:78 80 LRDLF-KNIRLGYFYKLNKGVKASCS-------IA--------------------------------------------- 106 (436) T ss_pred HHHHh-cCCCEEEEEECCCcceeeee-------ee--------------------------------------------- Confidence 55554 67789999998654321110 00 Q ss_pred ccchhcccccccccccceeceeeeecccccceeeeeecccccccccccccccccccccccccccccccccccccceeeec Q lcl|Aclame:pro 147 TAEIIAKTRQLGTYPTLGDNWRIDVSGASGGSAAALALGNIVVDSGVTFGNSEDAPAVMTSPAVMEKYAKFGMPLISAVY 226 (663) Q Consensus 147 ~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 226 (663) .+.+ T Consensus 107 ----------------------------------------------------------------------------~Aky 110 (436) T protein:vir:78 107 ----------------------------------------------------------------------------TARC 110 (436) T ss_pred ----------------------------------------------------------------------------eeec Confidence 0111 Q ss_pred chhhccccccccccccccccccccceecccceecccceeEEEecccccccceeeeccCCcceeeEeeeecccccccccch Q lcl|Aclame:pro 227 PGEIGSTVEVEIVSKTAFNSGAQQTIYPFGGTRTSNARGVIQYGPMTDDQFAIIVRRDGIVVESTVLSTRKGDRDVYGSN 306 (663) Q Consensus 227 ~g~~g~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 306 (663) +|..||.+++.+.....-. + .+.+..-......+...+. T Consensus 111 ~g~~gn~i~v~v~~~~~d~----------------~-------------~~dv~~~~g~~~~d~~~~~------------ 149 (436) T protein:vir:78 111 SGIRGNDLKVIVTTNIDDN----------------A-------------KFDVVTLLDNKKVDTQIAK------------ 149 (436) T ss_pred CCCCCcEEEEEeccccccc----------------C-------------ceEEEEEecchhhhhhhHH------------ Confidence 2222222221111000000 0 0000000000000000000 Q ss_pred hhhhhhhcCCCceEEEEeecccCCccceeEEecCcccccccccchhhhHHHHHhhhhccccceeEEeeccCcCChhHHHH Q lcl|Aclame:pro 307 IFMDDYFRNGGSNFIFASSEGWPAGFTGIIQLGGGTSANADVGADELIKGWDLFSDREALHVNLMIAGACGSDGAEIAST 386 (663) Q Consensus 307 ~~~~~~~~~~~s~~v~~~~~~~~~~~~~~~~l~gg~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (663) .+.+ ...+.++.....+.... .....|.||.++.. ++..++..+++.++.. ..+.+.++.. + .+ T Consensus 150 -~~~~---l~~n~~V~~~~~g~la~-~a~~~LtGG~dG~~-~T~~dy~~al~~le~~---~fn~l~~~~~--d-----~~ 213 (436) T protein:vir:78 150 -VITE---LQDNDYVTWKKEATLEA-TAGLTFTNGTNGEA-VTGTEYQAFLDKIESY---SFNALGCLAT--T-----AE 213 (436) T ss_pred -HHhh---ccCCceEEEEecccccc-cceeeeeccccccc-cchHHHHHHHHHHccc---ceeEEEecCC--C-----hH Confidence 0000 00111222222222111 22356888888753 4678888888887655 4555555542 1 23 Q ss_pred HHHHHHHHHHhhCCe-----EEEecccccccccccccccHHHHHHHHhhcccccchhhhccCcCcceEEEecCceeeccc Q lcl|Aclame:pro 387 VQKYVVSLADDRQDC-----VAIVNPPAELMVGIPTSTAVKNIVEWRNGMTGSGEVVDNNMNISSTYAFIIGNYKYQYDK 461 (663) Q Consensus 387 ~~~~~~~~~~~~~~~-----~~i~d~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~p~~~~~d~ 461 (663) ++..+.+|+.++|+. -+++.... ..+.+...-+.. . T Consensus 214 ~~~~~~a~ikr~re~~g~~~~aV~~~~~---------------------------------~~d~EgIInv~n------~ 254 (436) T protein:vir:78 214 IKSLFVEFTKRMRDKVGAKFQTVLYKKN---------------------------------DADYEGVVSVEN------K 254 (436) T ss_pred HHHHHHHHHHHHHhhcCCeEEEEecCCC---------------------------------CCCCceEEEeec------c Confidence 566778888877642 22321100 011111111111 1 Q ss_pred ccCcee-EechHHHHHHHHHhhhhccCceecccceecceeecceeeeeecChhhhhhhhhCCceEEEEeeCCCcEEE-Ec Q lcl|Aclame:pro 462 YNDINR-WVPLAADIAGLCAYTDQVSHPWMSPAGYRRGQIRNCIKLAIEPKQSMRDTMYQVAINPVTGFAGGDGFVL-FG 539 (663) Q Consensus 462 ~~~~~~-~~p~s~~~AG~~a~~d~~~g~~~span~~~~~i~~~~~~~~~~~~~~~~~Ln~~~in~i~~~~~~~G~~~-wG 539 (663) ..+... ..-..+++||++|..+ +.+|+.|+. +.+...+...++++|++.+.++|.-++.. .+ +++++ -| T Consensus 255 v~g~~~~~~~~~a~vAG~~Ag~~----~~~S~T~~~---~~~~~~v~~~~t~~e~~~ai~~G~lvl~~-d~-~~v~I~~~ 325 (436) T protein:vir:78 255 IKDTGLLESSLIYWTTGAIAGCD----INKSNTNKR---YDGEFDVDVNYTQIHLEEALKTGKFIFHK-VG-DEVHVLED 325 (436) T ss_pred cCCceechhHHHHHHHHHHhcCc----cccCcccee---cCccccccccCCHHHHHHHHhCCeEEEEE-eC-CeEEEEEc Confidence 111110 1123578999999876 455888885 44555677889999999999999988864 44 44444 34 Q ss_pred ceec----CCCCccceeeehhhHHHHHHHHHHHHHH-Hhhcc-cCCHHHHHHHHHHHHHHHHHHHhcCceEEEE---EEE Q lcl|Aclame:pro 540 DKMA----TQVPSPFDRINVRRLFNMLKKNIGDTSK-YELFE-NNDAFTRQSFRMETSQYLDGIRSLGGCYDFR---VVC 610 (663) Q Consensus 540 ~rT~----~~~~~~~~~i~vrR~~~~i~~~~~~~~~-~~v~e-pn~~~~~~~v~~~i~~~L~~l~~~gal~g~~---v~~ 610 (663) -.|+ ...+.+|+.|.++|++|+|.+.+++... .|+++ ||+..-|..++..|+.||.+|.++|+|..|. +.+ T Consensus 326 VNTltt~~~~k~~~~~kI~vir~~D~i~~di~~~~~~~yiGKv~N~~dgr~~l~~~i~~yl~~L~~~g~I~~f~~~Dv~v 405 (436) T protein:vir:78 326 INTFVSFTDEKNDDFSSNQSVRVLDQIANDIATLFNTKYLGEVPNDKSGRISFWNDVVKHHEQLQNMRAIEDFKADDVSV 405 (436) T ss_pred cccceecCCCCCcchhhhhHHHHHHHHHHHHHHHhhhccccccCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEE Confidence 3444 2334689999999999999999999875 59995 5999999999999999999999999999876 433 Q ss_pred ccCCCCHHHhhCCEEEEEEEEEecCcceEEEEEEEEe Q lcl|Aclame:pro 611 DTTNNTPNVIDRNEFVGTIYVKPPRSINYITLNMVAT 647 (663) Q Consensus 611 d~~~nt~~~i~~G~~~~~i~~~p~~p~e~i~~~~~~~ 647 (663) ++.+ ....+++.+.++|+..+|+|.+++... T Consensus 406 ~~~~------~~~~v~v~~~v~pvdamekiy~ti~v~ 436 (436) T protein:vir:78 406 EPGS------DKKTVVVSDAVKVISAMSKLYMTVSVS 436 (436) T ss_pred eecC------CCCEEEEEEEEEEEEeeeeEEEEEEEC Confidence 3211 356788999999999999999998775 No 49 >protein:vir:3788 Length: 376 # NCBI annotation: tail sheath # Family: family:all:669 # MgeID: mge:328 # MgeName: HP2 # Cross-refs: genbank:acc:NP_536828;genbank:gi:17981837;genbank:GeneID:929216 Probab=99.33 E-value=1.2e-11 Score=80.39 Aligned_cols=354 Identities=11% Similarity=0.054 Sum_probs=192.9 Q ss_pred hhccccccccccccccccccccceecccceecccceeEEEecccccccceeeeccCCcceeeEeeeecccccccccc--- Q lcl|Aclame:pro 229 EIGSTVEVEIVSKTAFNSGAQQTIYPFGGTRTSNARGVIQYGPMTDDQFAIIVRRDGIVVESTVLSTRKGDRDVYGS--- 305 (663) Q Consensus 229 ~~g~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~--- 305 (663) -|+ .+++... +. ...+...-..+....+..... ....+.+...++.+...+. T Consensus 1 ~~~-~v~vn~~-----n~--------~~g~~~~~er~~Lfig~~~~~-----------~~~~~~~~~~sdld~~lg~~~~ 55 (376) T protein:vir:37 1 MFP-SVQINAL-----NQ--------LSGETKEIERHALFVGVGTTN-----------QGKLLALTPDSDFDKVFGETDT 55 (376) T ss_pred CCC-eEEEecc-----cc--------cCCCcccccceEEeecccccc-----------ccceeeecCccchHhhhCCCch Confidence 111 0111000 00 000011111111111111100 0111122211111111111 Q ss_pred --hhhhhhhhcCCCceEEEEeecccCCccceeEEecCcccccccccchhhhHHHHHhhhhccccceeEEeeccCcCChhH Q lcl|Aclame:pro 306 --NIFMDDYFRNGGSNFIFASSEGWPAGFTGIIQLGGGTSANADVGADELIKGWDLFSDREALHVNLMIAGACGSDGAEI 383 (663) Q Consensus 306 --~~~~~~~~~~~~s~~v~~~~~~~~~~~~~~~~l~gg~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (663) ...+.....|++..+....... .....+...+++..... +.+..+....+...+... T Consensus 56 ~lk~~v~aa~~naG~~~~~~~~~~-------------------~~~~~~~~~Av~~a~~~--~s~E~V~v~~pv~t~~a~ 114 (376) T protein:vir:37 56 DLKKQVRAAMLNAGQNWFAHVYIA-------------------QEDGYDFVECVKKANQT--ASFEYCVNTRYLGVDKAS 114 (376) T ss_pred HHHHHHHHHHhCCCCcEEEEEEee-------------------cCCchHHHHHHHHhhhh--cCceEEEEeccccccHHH Confidence 1112222334444332111110 11123456666554322 333333333333344555 Q ss_pred HHHHHHHHHHHHHh-hCCeEEEecccccccccccccccHHHHHHHHhhcccccchhhhccCcCcceEEEecC-ceeeccc Q lcl|Aclame:pro 384 ASTVQKYVVSLADD-RQDCVAIVNPPAELMVGIPTSTAVKNIVEWRNGMTGSGEVVDNNMNISSTYAFIIGN-YKYQYDK 461 (663) Q Consensus 384 ~~~~~~~~~~~~~~-~~~~~~i~d~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~p-~~~~~d~ 461 (663) +.+++.....+..+ +|..|.|+..+.-... ....+++.+|..... ..+..+.+.+..++.- |- T Consensus 115 i~aa~~~a~el~~~~~Rpv~file~r~~~~~----~~~~e~w~~y~~~~~------al~~gia~~~V~~V~~~~g----- 179 (376) T protein:vir:37 115 IGKLQECYAELLAKFGRRTFFIQAVQGINHD----QSDGETWDQYVQKLT------TLQQTIVADHVCLVPLLFG----- 179 (376) T ss_pred HHHHHHHHHHHHHhcCCeEEEEEeccCcCcc----cccccCHHHHHHHHH------Hhhcccccccceeeeeehh----- Confidence 66666666667666 5778888887632111 112234444544332 2234455566554311 11 Q ss_pred ccCceeEechHHHHHHHHHhhhhccCceecccceecceeecceeee-------eecChhhhhhhhhCCceEEEEeeCCCc Q lcl|Aclame:pro 462 YNDINRWVPLAADIAGLCAYTDQVSHPWMSPAGYRRGQIRNCIKLA-------IEPKQSMRDTMYQVAINPVTGFAGGDG 534 (663) Q Consensus 462 ~~~~~~~~p~s~~~AG~~a~~d~~~g~~~span~~~~~i~~~~~~~-------~~~~~~~~~~Ln~~~in~i~~~~~~~G 534 (663) ...|.+||++|+. ..-++.||..+..+.+.+....+ ..++.+.++.|..+|..+.+.|++..| T Consensus 180 --------n~~G~~aGRl~~a--aVsVadspgRV~tG~l~gl~~~~lp~d~~~~~l~~a~l~aLd~agy~vp~~Y~gy~G 249 (376) T protein:vir:37 180 --------NETGVLAGRLANR--AVTVADSPARVQTGALVSLGSANKPLDKDRNELTLAHLKSLETARYSVPMWYPDYDG 249 (376) T ss_pred --------hhHHHHHHHHhhc--ccchhhCccceeccccccccccccccCcCcccCCHHHHHHHHhCCCeEEEeeCCCCc Confidence 2258889988644 22367899888777776653322 246788889999999999999999999 Q ss_pred EEEEcceecCCCCccceeeehhhHHHHHHHHHHHHHHHhhcccC---CHHHHHHHHHHHHHHHHHHHhcCceEE----EE Q lcl|Aclame:pro 535 FVLFGDKMATQVPSPFDRINVRRLFNMLKKNIGDTSKYELFENN---DAFTRQSFRMETSQYLDGIRSLGGCYD----FR 607 (663) Q Consensus 535 ~~~wG~rT~~~~~~~~~~i~vrR~~~~i~~~~~~~~~~~v~epn---~~~~~~~v~~~i~~~L~~l~~~gal~g----~~ 607 (663) +.+-++|||+...++|+||..+|+.+.+.|.++..+-.++...- ++.-....+.-+..-|++|.+..-|.| .+ T Consensus 250 ~Y~~d~~tl~~~gsDY~~ie~~RVvdKa~R~vR~~ai~~i~D~~lnst~~sia~~~~yi~~pLr~M~~s~~i~g~~fpGe 329 (376) T protein:vir:37 250 YYWADGRTLDVEGGDYQVIENLRVVDKVARKVRLLAIGKIADRSFNSTTSSTEYHKNYFAKPLRDMSKSATINGKDFPGE 329 (376) T ss_pred eEEeCceEeccCCCChhhhhhhhHHHHHHHHHHHHHHHHhCCcccCcchhhHHHHHHHHHHHHHHHHhcchhccccccce Confidence 98888899988888999999999999999999988877765432 333455667778888999999988888 24 Q ss_pred EEEccCC-CCHHHhhCCEEEEEEEEEecCcceEEEEEEEEeecccchhh Q lcl|Aclame:pro 608 VVCDTTN-NTPNVIDRNEFVGTIYVKPPRSINYITLNMVATSTGANFDE 655 (663) Q Consensus 608 v~~d~~~-nt~~~i~~G~~~~~i~~~p~~p~e~i~~~~~~~~~~~~~~e 655 (663) |...++. =+..-+...++.|.+.+.|.--..+|+..|--.-. +..| T Consensus 330 I~~p~d~Di~i~w~s~~~V~I~~~v~P~~~pk~Itv~I~Ldls--n~~~ 376 (376) T protein:vir:37 330 CMPPKDDAITIVWQSKTKVTIYIKVRPYDCPKEITANIFLDLD--SLGE 376 (376) T ss_pred eecCCCCCceEEeeccceEEEEEEEEeccCCceEEEEEEeecC--CCCC Confidence 5555332 22223477889999999999999999877543211 1222 No 50 >protein:vir:102359 Length: 356 # NCBI annotation: XkdK protein # Family: family:all:632 # MgeID: mge:1566 # MgeName: phi CD119 # Cross-refs: genbank:acc:YP_529565;genbank:gi:90592650;genbank:GeneID:3974491 Probab=99.31 E-value=1.9e-12 Score=84.81 Aligned_cols=324 Identities=12% Similarity=0.045 Sum_probs=167.1 Q ss_pred cccccceeeecchhhccccccccccccccccccccceecccceecccceeEEEecccccccceeeeccC-CcceeeEeee Q lcl|Aclame:pro 216 KFGMPLISAVYPGEIGSTVEVEIVSKTAFNSGAQQTIYPFGGTRTSNARGVIQYGPMTDDQFAIIVRRD-GIVVESTVLS 294 (663) Q Consensus 216 ~~~~~~~~a~~~g~~g~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~ 294 (663) -.+.| .+.+.+-. ...+ ....+.+. ...+++... ....+...+. T Consensus 1 ~~glp------------~i~i~f~~------------------~a~t----a~~~g~rG-iv~~il~d~~~~~~~~~~~~ 45 (356) T protein:vir:10 1 MAGLV------------NINIEFKE------------------LATS----FIQRSKAG-IVAIILKDTTKMYKELTSED 45 (356) T ss_pred CCCCC------------ceeEEEee------------------ccee----eccCCccc-eEEEEEecCCcceeEEeccc Confidence 00000 01110000 0000 00001110 011111111 1111111111 Q ss_pred ecccccccccchhhhhhhhcCCCceEEEEeecccCCccceeEEecCcccccccccchhhhHHHHHhhhhccccceeEEee Q lcl|Aclame:pro 295 TRKGDRDVYGSNIFMDDYFRNGGSNFIFASSEGWPAGFTGIIQLGGGTSANADVGADELIKGWDLFSDREALHVNLMIAG 374 (663) Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~s~~v~~~~~~~~~~~~~~~~l~gg~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 374 (663) ..+.... .....++...+..+. . ......+..+..... .+..++..+|+.++. +..+.+.+| T Consensus 46 ~v~~~~~-~~n~~~i~~~~~g~~--------~----~~~~~~p~~~~~~~~--~t~~~y~~aL~~le~---~~fn~l~~~ 107 (356) T protein:vir:10 46 DIPISLS-ADNKKYIKYGFVGAT--------D----NEKVLRPSKVIISTF--TEDGKVEDILEELES---VEFNYLCMP 107 (356) T ss_pred cchhHHH-HHHHHHHHHHhhccc--------c----ccccccceeeeeecc--cCchhHHHHHHHhcC---ccceEEEec Confidence 1100000 000111111111100 0 000000111111111 133567777777764 345556555 Q ss_pred ccCcCChhHHHHHHHHHHHHHHhhCC----eEEEecccccccccccccccHHHHHHHHhhcccccchhhhccCcCcceEE Q lcl|Aclame:pro 375 ACGSDGAEIASTVQKYVVSLADDRQD----CVAIVNPPAELMVGIPTSTAVKNIVEWRNGMTGSGEVVDNNMNISSTYAF 450 (663) Q Consensus 375 ~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~i~d~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~ 450 (663) .. + .+.+..+.+++.++|+ .+..+-+.. . .+.+... T Consensus 108 ~~--d-----~~~~~~~~a~ikr~r~~~~~~~~~V~~~~--------~-------------------------aD~EgII 147 (356) T protein:vir:10 108 EA--I-----EAEKTKIVTWIKKIREEESTEAKAVLANI--------K-------------------------ADNEAII 147 (356) T ss_pred CC--C-----hHHHHHHHHHHHHHHhcCCcEEEEEecCC--------C-------------------------CCCceeE Confidence 32 1 1345667778877664 233221100 0 0111111 Q ss_pred EecCceeecccccCceeE--echHHHHHHHHHhhhhccCceecccceecceeecceeeeeecChhhhhhhhhCCceEEEE Q lcl|Aclame:pro 451 IIGNYKYQYDKYNDINRW--VPLAADIAGLCAYTDQVSHPWMSPAGYRRGQIRNCIKLAIEPKQSMRDTMYQVAINPVTG 528 (663) Q Consensus 451 ~~~p~~~~~d~~~~~~~~--~p~s~~~AG~~a~~d~~~g~~~span~~~~~i~~~~~~~~~~~~~~~~~Ln~~~in~i~~ 528 (663) -+-..+. . .+ ..+ .-..+++||++|..+.+ +|+.|+.+..+ .....+++.|.+.+..+|.-++.. T Consensus 148 nv~n~~~-~---~g-~~~t~~~~~~~vAG~~Ag~~~n----~S~T~~~~~~~----~~~~~~t~~e~~~ai~~G~lvl~~ 214 (356) T protein:vir:10 148 NFTENVV-V---DG-EEITAEKYTTRVASLIASTPNT----QSITYAPLDEV----ESIVKIDKASADAKVQAGELILRR 214 (356) T ss_pred EeecCeE-e---cc-eeechhHHHHHHHHHHhccchh----ccccceecCCc----cccccCCHHHHHHHHhCCeEEEEE Confidence 1111111 0 11 111 12257899999988754 48888765432 223468899999999999988754 Q ss_pred eeCCCcEEEEcceec----CCCCccceeeehhhHHHHHHHHHHHHHH-Hhhccc-CCHHHHHHHHHHHHHHHHHHHhcCc Q lcl|Aclame:pro 529 FAGGDGFVLFGDKMA----TQVPSPFDRINVRRLFNMLKKNIGDTSK-YELFEN-NDAFTRQSFRMETSQYLDGIRSLGG 602 (663) Q Consensus 529 ~~~~~G~~~wG~rT~----~~~~~~~~~i~vrR~~~~i~~~~~~~~~-~~v~ep-n~~~~~~~v~~~i~~~L~~l~~~ga 602 (663) .+++=.+..|-.|+ ...+.+|+.|.+.|++|.|.+.+++... .|+++- |+..-|..++..|+.||.+|.+.|+ T Consensus 215 -d~~~V~I~~~VNSltt~t~~k~~~f~Kirvvr~~D~i~~Di~~~f~~~yiGKv~N~~dgr~~l~~ai~~y~~~L~~~~~ 293 (356) T protein:vir:10 215 -LSGKIRIARGINSLTTLTAEKGEIFQKIKLVDTKDLISKDIKNIYVEKYLRKCPNTYDNKCLFIVAVQSYLTELAKQEL 293 (356) T ss_pred -EcCeEEEEecCccceecCCCCCcchhhhHHHHHHHHHHHHHHHHHhhccccccCCCHHHHHHHHHHHHHHHHHHHhCCc Confidence 44333444455554 2334589999999999999999999886 699976 9999999999999999999999999 Q ss_pred eE-EEEEEEccCC--------------CCHHHhh----CCEEEEEEEEEecCcceEEEEEEEE Q lcl|Aclame:pro 603 CY-DFRVVCDTTN--------------NTPNVID----RNEFVGTIYVKPPRSINYITLNMVA 646 (663) Q Consensus 603 l~-g~~v~~d~~~--------------nt~~~i~----~G~~~~~i~~~p~~p~e~i~~~~~~ 646 (663) |. +|.+..|.+. |+...+. .-.+.+.+.+.|+-.+|.|.+++.. T Consensus 294 I~~~~~~eid~e~q~~~~~~~g~d~~~~~d~~v~~~~~~~~v~~~~~v~~vdamE~iy~ti~v 356 (356) T protein:vir:10 294 IDSNFTVEIDLEKQKEYLEGKKIAVSKMKENEIKEANTGSNGFYLINLKLVDAMEDINIRVQM 356 (356) T ss_pred cccCceeEecccchHHHhhhccccccccccceeecccCCcEEEEEEEEEEEeeeeeEEeEEeC Confidence 96 5777777542 2222222 2357899999999999999999877 No 51 >protein:vir:3751 Length: 376 # NCBI annotation: orf23 # Family: family:all:669 # MgeID: mge:79 # MgeName: HP1 # Cross-refs: genbank:acc:NP_043492;genbank:gi:9628627;genbank:GeneID:1261129 Probab=99.30 E-value=6.7e-11 Score=76.35 Aligned_cols=355 Identities=11% Similarity=0.058 Sum_probs=198.2 Q ss_pred hhccccccccccccccccccccceecccceecccceeEEEecccccccceeeeccCCcceeeEeeeecccccccccc--- Q lcl|Aclame:pro 229 EIGSTVEVEIVSKTAFNSGAQQTIYPFGGTRTSNARGVIQYGPMTDDQFAIIVRRDGIVVESTVLSTRKGDRDVYGS--- 305 (663) Q Consensus 229 ~~g~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~--- 305 (663) -|+ .+++... + ....+...-..+....|..... ....+.+...++.+...+. T Consensus 1 ~~~-~v~vn~l-----n--------~~qg~~~~ver~~lfig~~~~~-----------~~~~~~~~~~sdld~~lg~~ds 55 (376) T protein:vir:37 1 MFP-SVQINAL-----N--------QLSGETKEIERHALFVGVGTTN-----------QGKLLALTPDSDFDKVFGETDT 55 (376) T ss_pred CCC-eEEEeee-----e--------ccCCCcccccceEEEeeccccc-----------cCceEEecCCCChHHhhCCCch Confidence 111 0111000 0 0000011111111111111110 0111122222221111110 Q ss_pred --hhhhhhhhcCCCceEEEEeecccCCccceeEEecCcccccccccchhhhHHHHHhhhhccccceeEEeeccCcCChhH Q lcl|Aclame:pro 306 --NIFMDDYFRNGGSNFIFASSEGWPAGFTGIIQLGGGTSANADVGADELIKGWDLFSDREALHVNLMIAGACGSDGAEI 383 (663) Q Consensus 306 --~~~~~~~~~~~~s~~v~~~~~~~~~~~~~~~~l~gg~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (663) ...+.+...|.+..+...... ......+...+++.+.. .+.+-.+.+.++...+... T Consensus 56 ~lk~~v~aa~~naG~~w~a~~~~-------------------p~~~~~~~~~Av~~a~~--~~s~E~V~v~~p~~t~~a~ 114 (376) T protein:vir:37 56 DLKKQVRAAMLNAGQNWFAHVYI-------------------AQEDGYDFVECVKKANQ--TASFEYCVNTRYLGVDKAS 114 (376) T ss_pred hHHHHHHHHHhCCCCceEEEEEe-------------------cCCChhhHHHHHHHHHh--hCCeeEEEEecCcchhHHH Confidence 111223333444333111110 01123456777777643 3444444444444445566 Q ss_pred HHHHHHHHHHHHHh-hCCeEEEecccccccccccccccHHHHHHHHhhcccccchhhhccCcCcceEEEecCceeecccc Q lcl|Aclame:pro 384 ASTVQKYVVSLADD-RQDCVAIVNPPAELMVGIPTSTAVKNIVEWRNGMTGSGEVVDNNMNISSTYAFIIGNYKYQYDKY 462 (663) Q Consensus 384 ~~~~~~~~~~~~~~-~~~~~~i~d~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~p~~~~~d~~ 462 (663) +.+++.....+..+ +|-.|.++..+.-.. . ...-+.+.+|...+. ..+.++.+.+..++.. +. T Consensus 115 i~a~qa~a~el~~~~~R~vffile~~g~d~-~---~~~ge~w~~y~~~l~------a~~~gia~~~V~vV~~-~~----- 178 (376) T protein:vir:37 115 IGKLQECYAELLAKFGRRTFFIQAVQGINH-D---QSDGETWDQYVQKLT------TLQQTIVADHVCLVPL-LF----- 178 (376) T ss_pred HHHHHHHHHHHHHhcCCeEEEEEeccCCCC-c---ccccCCHHHHHHHHH------HHhccccccceeeeee-ec----- Confidence 66666666666666 466888887753210 0 111233444544332 2345567777777643 11 Q ss_pred cCceeEechHHHHHHHHHhhhhccCceecccceecceeecceeee-------eecChhhhhhhhhCCceEEEEeeCCCcE Q lcl|Aclame:pro 463 NDINRWVPLAADIAGLCAYTDQVSHPWMSPAGYRRGQIRNCIKLA-------IEPKQSMRDTMYQVAINPVTGFAGGDGF 535 (663) Q Consensus 463 ~~~~~~~p~s~~~AG~~a~~d~~~g~~~span~~~~~i~~~~~~~-------~~~~~~~~~~Ln~~~in~i~~~~~~~G~ 535 (663) + ...|.+||++++. ..-++.||..+..+.|.+....+ ..++.+....|..+|..+.+.+++..|+ T Consensus 179 -g-----n~~G~~aGRl~na--aVsVadspgRV~tGai~gl~~~~~p~d~~g~el~~a~l~aLd~arysvpr~Y~gydG~ 250 (376) T protein:vir:37 179 -G-----NETGVLAGRLANR--AVTVADSPARVQTGALVSLGSANKPLDKDGNELTLAHLKSLETARYSVPMWYPDYDGY 250 (376) T ss_pred -c-----chHHHHHHHHHhC--CcchhcCccceeecccccccccccccccCCcccchHHHHHHHhCCCeEEEeeCCCCce Confidence 1 2368889988752 23368899988877776654332 2356677889999999999999999999 Q ss_pred EEEcceecCCCCccceeeehhhHHHHHHHHHHHHHHHhhccc---CCHHHHHHHHHHHHHHHHHHHhcCceEEEE----E Q lcl|Aclame:pro 536 VLFGDKMATQVPSPFDRINVRRLFNMLKKNIGDTSKYELFEN---NDAFTRQSFRMETSQYLDGIRSLGGCYDFR----V 608 (663) Q Consensus 536 ~~wG~rT~~~~~~~~~~i~vrR~~~~i~~~~~~~~~~~v~ep---n~~~~~~~v~~~i~~~L~~l~~~gal~g~~----v 608 (663) .+-++||++...++|++|..+|.++.+.|.++..+-..+..+ .++.-....+..++.=|+.|.+++.|.|.. | T Consensus 251 Yw~dg~tl~~~gsDYq~ie~~RVvdKa~R~vR~~Ai~~i~Dr~lnstp~sia~~~~~~~~pLr~M~ks~ei~g~~fpgei 330 (376) T protein:vir:37 251 YRADGRTLDVEGGDYQVIENLRVVDKVARKVRLLAIGKIADRSFNSTTSSTEYHKNYFAKPLRDMSKSATINGKDFPGEC 330 (376) T ss_pred EEeCCeEeccCCCCeeeehhchHHHHHHHHHHHHHHHHhcCccccCChhHHHHHHHHHhHHHHHHHhhhhhcccccccee Confidence 888889998888899999999999999999998877666543 256667888899999999999999999843 5 Q ss_pred EEccCC-CCHHHhhCCEEEEEEEEEecCcceEEEEEEEEeecccchhh Q lcl|Aclame:pro 609 VCDTTN-NTPNVIDRNEFVGTIYVKPPRSINYITLNMVATSTGANFDE 655 (663) Q Consensus 609 ~~d~~~-nt~~~i~~G~~~~~i~~~p~~p~e~i~~~~~~~~~~~~~~e 655 (663) ...++. -+..-....++.|-+.++|.--...|++.|--.-. +..| T Consensus 331 ~~P~d~dI~i~w~sk~~V~I~~~vrPy~cpk~i~~~I~LDls--~~~~ 376 (376) T protein:vir:37 331 MPPKDDAITIVWQSKTKVTIYIKVRPYDCPKEITANIFLDLD--SLGE 376 (376) T ss_pred ecCCCCceEEEeccCceEEEEEEEeeecCcceeEEEEEEecC--CCCC Confidence 554221 11111235678888888888777888888755422 2333 No 52 >protein:vir:78782 Length: 370 # NCBI annotation: putative tail sheath protein # Family: family:all:669 # MgeID: mge:1857 # MgeName: phiO18P # Cross-refs: genbank:acc:YP_001285652;genbank:gi:148727158;genbank:GeneID:5220132 Probab=99.21 E-value=9.1e-11 Score=75.64 Aligned_cols=351 Identities=11% Similarity=0.026 Sum_probs=185.3 Q ss_pred hhccccccccccccccccccccceecccceecccceeEEEecccccccceeeeccCCcceeeEeeeecccccccccc--- Q lcl|Aclame:pro 229 EIGSTVEVEIVSKTAFNSGAQQTIYPFGGTRTSNARGVIQYGPMTDDQFAIIVRRDGIVVESTVLSTRKGDRDVYGS--- 305 (663) Q Consensus 229 ~~g~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~--- 305 (663) -|+ ++++... + . ...+......+....|....+. ...+.+...++.+...+. T Consensus 1 ~~~-~v~vn~~-----n------~--~~g~~~~~er~~lfig~~~~~~-----------g~~~~~~~~sdld~~l~~~ds 55 (370) T protein:vir:78 1 MWP-YVQIYNL-----N------Q--MQGPVTEVERHLLFIGSAASNT-----------GKLLSLNAQSDFDQLLGAADS 55 (370) T ss_pred CCc-eEEEeec-----c------c--cCCCcCccceeEEEEecccccc-----------cceEeecCccCHHHhcCCcCh Confidence 111 0111000 0 0 0000111111111111111111 111122222211111110 Q ss_pred --hhhhhhhhcCCCceEEEEeecccCCccceeEEecCcccccccccchhhhHHHHHhhhhccccceeEEeeccCcCChhH Q lcl|Aclame:pro 306 --NIFMDDYFRNGGSNFIFASSEGWPAGFTGIIQLGGGTSANADVGADELIKGWDLFSDREALHVNLMIAGACGSDGAEI 383 (663) Q Consensus 306 --~~~~~~~~~~~~s~~v~~~~~~~~~~~~~~~~l~gg~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (663) ...+.....|++..+.. .. .+ .....+...+++.+.... .+..+..... .++... T Consensus 56 ~lk~~v~aa~~naG~~~~~-~~----------~p---------~~~~~d~~~Av~~a~~~~--s~E~V~v~~~-~s~~a~ 112 (370) T protein:vir:78 56 ELKANLLAARDNAGQNWSA-AA----------YV---------LPTDKPWLDAARDAQQTQ--SFEGVVVLGQ-EWHQAA 112 (370) T ss_pred hHHHHHHHHHhCCCCceEE-EE----------EE---------ecCchhHHHHHHHHHhhC--CccEEEEecC-cchHHH Confidence 11122333344443311 11 11 123346777777664433 3333332222 234455 Q ss_pred HHHHHHHHHHHHHhh-CCeEEEecccccccccccccccHHHHHHHHhhcccccchhhhccCcCcceEEEecCceeecccc Q lcl|Aclame:pro 384 ASTVQKYVVSLADDR-QDCVAIVNPPAELMVGIPTSTAVKNIVEWRNGMTGSGEVVDNNMNISSTYAFIIGNYKYQYDKY 462 (663) Q Consensus 384 ~~~~~~~~~~~~~~~-~~~~~i~d~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~p~~~~~d~~ 462 (663) +.+++..+..+..++ |..|.++..+.-. .. +.+.+|...+. ..+..+.+.+..++.-|.. T Consensus 113 ~~a~~~~a~el~n~~~Rpv~file~~~~~-----~~---e~w~~y~~~l~------al~~gia~~~V~vvp~~~g----- 173 (370) T protein:vir:78 113 INAAHALNQELIAKWGRWQFMLLAVPAIA-----DE---QDWATYEAELA------TLQDGIAASSVSLIPQLWP----- 173 (370) T ss_pred HHHHHHHHHHHHHhcCCeEEEEEeecCCC-----Cc---CCHHHHHHHHH------HhhhccccccceEEeeecc----- Confidence 666666666666665 5678887765321 11 33444444322 2344566777777644421 Q ss_pred cCceeEechHHHHHHHHHhhhhccCceecccceecceeecceee-----eeecChhhhhhhhhCCceEEEEeeCCCcEEE Q lcl|Aclame:pro 463 NDINRWVPLAADIAGLCAYTDQVSHPWMSPAGYRRGQIRNCIKL-----AIEPKQSMRDTMYQVAINPVTGFAGGDGFVL 537 (663) Q Consensus 463 ~~~~~~~p~s~~~AG~~a~~d~~~g~~~span~~~~~i~~~~~~-----~~~~~~~~~~~Ln~~~in~i~~~~~~~G~~~ 537 (663) -.-|.+||+++.. .--+..+|.-...+.+.|...+ ...++.+.++.|..+|..+.+.|++..|+.+ T Consensus 174 -------~~~G~~aGRL~na--avsVadsP~Rv~tG~l~gl~~~p~d~~~~~l~~a~l~aLd~agy~vp~~Y~gy~G~Y~ 244 (370) T protein:vir:78 174 -------TLAGAYAGRLCNR--AVSIADSPCRVKTGALVGLGNKPVGKDGIPLPLATLQTLEANRYSVPMWYPDYDGIYW 244 (370) T ss_pred -------ccHHHHHHHHhcC--eeeecccceeeeccccccccccccccCCcccCHHHHHHHHhCCCeEEEeeCCCCceEE Confidence 1137788876542 2237788887777767664322 2346778899999999999999999999988 Q ss_pred EcceecCCCCccceeeehhhHHHHHHHHHHHHHHHhh-cccCCH--HHHHHHHHHHHHHHHHHHhcCceEE--EEEEEcc Q lcl|Aclame:pro 538 FGDKMATQVPSPFDRINVRRLFNMLKKNIGDTSKYEL-FENNDA--FTRQSFRMETSQYLDGIRSLGGCYD--FRVVCDT 612 (663) Q Consensus 538 wG~rT~~~~~~~~~~i~vrR~~~~i~~~~~~~~~~~v-~epn~~--~~~~~v~~~i~~~L~~l~~~gal~g--~~v~~d~ 612 (663) -.+|||+...++|+||..+|+.+.+.|.++..+-..+ +|-.|+ ......+..+..=|++|...+.+.| |.-.|.. T Consensus 245 ~d~~tl~~~gsDYq~ie~~RVvdKa~R~vR~~ai~~i~D~~lnst~gsia~~~~~~~~~L~ema~s~~i~~~~fpgeI~~ 324 (370) T protein:vir:78 245 ADGRTLDAEGGDYQVIENLRIAYKVARRMRLRAIARIGDRSFNSTPGSTAAAITYFGKDLREMAKSTTINGQPFPGDIAS 324 (370) T ss_pred eCceEeccCCCChhhhhhhhHHHHHHHHHHHHHHHHhCCcccCCCCcchhHHHHHHHhhHHHHHhhhhhcccccceeEec Confidence 8889998877899999999999999999996655444 322222 2233444555566777777887776 4334432 Q ss_pred C---CCCHHHhhCCEEEEEEEEEecCcceEEEEEEEEeecccchhhhhh Q lcl|Aclame:pro 613 T---NNTPNVIDRNEFVGTIYVKPPRSINYITLNMVATSTGANFDELIG 658 (663) Q Consensus 613 ~---~nt~~~i~~G~~~~~i~~~p~~p~e~i~~~~~~~~~~~~~~e~~~ 658 (663) . .=++.-....++.|.+.+.|.--...|+..|.-.- ++++==+ T Consensus 325 p~d~Di~i~w~s~~~v~I~~~v~P~~~pk~Itv~I~LDl---s~e~~~~ 370 (370) T protein:vir:78 325 PQDGDIRIQWVAKNLVSVFVVVRTVDCPKGITVNIMLDL---SLNNGEG 370 (370) T ss_pred cCCCcceEEeeccceEEEEEEEEeccCCceEEEEEEEee---ccccCCC Confidence 1 11222347788999999999988899988875432 1222111 No 53 >protein:vir:276 Length: 369 # NCBI annotation: putative tail sheath protein # Family: family:all:669 # MgeID: mge:7 # MgeName: K139 # Cross-refs: genbank:acc:NP_536656;genbank:gi:17975134;genbank:GeneID:929090 Probab=99.15 E-value=6.5e-10 Score=70.93 Aligned_cols=349 Identities=12% Similarity=0.047 Sum_probs=189.2 Q ss_pred eecccceeEEEecccccccceeeeccCCcceeeEeeeeccc------ccccccchhhhhhhhcCCCceEEEEeecccCCc Q lcl|Aclame:pro 258 TRTSNARGVIQYGPMTDDQFAIIVRRDGIVVESTVLSTRKG------DRDVYGSNIFMDDYFRNGGSNFIFASSEGWPAG 331 (663) Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~s~~v~~~~~~~~~~ 331 (663) ....+ + .-...+.....-..+...+.+..... .....+.....+.++....+.+- ... T Consensus 1 m~~~~---V------~in~~n~~qg~~~~ver~~lfig~g~~~~~~g~~~~~~~~sdld~~lg~~ds~lk-~~v------ 64 (369) T protein:vir:27 1 MAWPT---V------IIKILNLMNGPIADIECHFLFVIRGTVSGEVRNLIMVDSTSDLDDVLAEASAEGL-AIV------ 64 (369) T ss_pred CCCCc---e------EEecccccCCCcccccceEEEEEeccccccccceEEecCccchHhhcCCcChhHH-HHH------ Confidence 00000 0 00000111111111122222221111 11111111112222221111100 000 Q ss_pred cceeEEecCccccc----ccccchhhhHHHHHhhhhccccceeEEeeccCcCChhHHHHHHHHHHHHHHhh-CCeEEEec Q lcl|Aclame:pro 332 FTGIIQLGGGTSAN----ADVGADELIKGWDLFSDREALHVNLMIAGACGSDGAEIASTVQKYVVSLADDR-QDCVAIVN 406 (663) Q Consensus 332 ~~~~~~l~gg~d~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~d 406 (663) ....+.+|.... ......+...+++..... +.+..+.+..+ .++...+.+++....++..++ |..|.|+. T Consensus 65 --~aa~~naG~~w~a~~~p~~~~~~~~~Av~~a~~~--~s~E~V~v~~p-~t~~a~i~aaq~~a~el~~~~~R~vffi~e 139 (369) T protein:vir:27 65 --KAAQLNGKQAWTAGVMILSEEDNWQDAVKKANEV--SSFEFVVLGFD-AETKAMIEDAITLRTELKNSLGREVGVLCQ 139 (369) T ss_pred --HHHHhCCCCceEEEEEEeCCchhHHHHHHhhhhh--CCccEEEEecC-cccHHHHHHHHHHHHHHHHhcCCeEEEEEe Confidence 000111111110 112345667777665433 33333333332 334456666666666666664 56777777 Q ss_pred ccccccccccccccHHHHHHHHhhcccccchhhhccCcCcceEEEecCceeecccccCceeEechHHHHHHHHHhhhhcc Q lcl|Aclame:pro 407 PPAELMVGIPTSTAVKNIVEWRNGMTGSGEVVDNNMNISSTYAFIIGNYKYQYDKYNDINRWVPLAADIAGLCAYTDQVS 486 (663) Q Consensus 407 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~p~~~~~d~~~~~~~~~p~s~~~AG~~a~~d~~~ 486 (663) .+.... ....-+...+|...+ ...+.++.+.+..++.-+.... .-.|.++|+++.. .. T Consensus 140 ~~~~~~----~~~~~e~w~dy~a~l------~al~~g~a~~~V~vv~~~~~~g----------n~~G~~aGRl~n~--aV 197 (369) T protein:vir:27 140 LPAINN----DPTNGQTWSEWLADT------VDIPKDVASEYISVVPNVHAAG----------DTLGKYAGRLANK--EV 197 (369) T ss_pred ccccCC----CccccCCHHHHHHHH------HHHhhccCcccceeeeeecccc----------chHHHHHHHHHhc--cc Confidence 542110 011223344454433 2334567788888874433221 2358888888752 22 Q ss_pred Cceecccceecceeecceeeee-----ecChhhhhhhhhCCceEEEEeeCCCcEEEEcceecCCCCccceeeehhhHHHH Q lcl|Aclame:pro 487 HPWMSPAGYRRGQIRNCIKLAI-----EPKQSMRDTMYQVAINPVTGFAGGDGFVLFGDKMATQVPSPFDRINVRRLFNM 561 (663) Q Consensus 487 g~~~span~~~~~i~~~~~~~~-----~~~~~~~~~Ln~~~in~i~~~~~~~G~~~wG~rT~~~~~~~~~~i~vrR~~~~ 561 (663) -++.+|..+..+.+.|...+.. .++.+.+..|..+|..+.+.|++..|+.+-++|||+...++|+||..+|..+. T Consensus 198 sIadsp~RVktG~l~g~~~~p~d~~g~~l~~a~l~aLd~agysvp~~Y~gy~G~Yw~d~~tl~~~gsDYq~iE~~RVvdK 277 (369) T protein:vir:27 198 SIADSPARVQTGSVLGNTELMKDKAGKALDLATLKALESNRIAVPMWYPDYPGQYWTTGRTLDVPGGDYQDIRHIRVAMK 277 (369) T ss_pred chhcCcceeeecccccccccccCCCCcccCHHHHHHHHhCCCeEEEeeCCCCceEEeCceEeccCCCCeehhhhhhHHHH Confidence 3688898887777777543322 35667888999999999999999999987788999888889999999999999 Q ss_pred HHHHHHHHHHHhhcccC---CHHHHHHHHHHHHHHHHHHHhcCceEEEEEEEccCC-CCHHHhhCCEEEEEEEEEecCcc Q lcl|Aclame:pro 562 LKKNIGDTSKYELFENN---DAFTRQSFRMETSQYLDGIRSLGGCYDFRVVCDTTN-NTPNVIDRNEFVGTIYVKPPRSI 637 (663) Q Consensus 562 i~~~~~~~~~~~v~epn---~~~~~~~v~~~i~~~L~~l~~~gal~g~~v~~d~~~-nt~~~i~~G~~~~~i~~~p~~p~ 637 (663) +.|.++..+-..+..|- ++.-....+..++.=|++|.+.+ ..++|...++. =+..-....++.|-+.+.|.--. T Consensus 278 a~R~vR~~Ai~~i~Dr~lnstp~sia~~~~~~~~pLr~M~ks~--fpgei~~P~d~dI~i~w~~k~~V~I~~~vrP~~~p 355 (369) T protein:vir:27 278 AARKVRIRAIARIADRTLNSTPQSIAAAKLYFTQDLRTMALTG--VPGEIYPPEDEDIQIKWVNSTDVEIYMSVQPYECP 355 (369) T ss_pred HHHHHHHHHHHHhcCcccccChhHHHHHHHHHhhHHHHHHhhc--CCeEEecCCCCceEEEeeccceEEEEEEEeeccCC Confidence 99999988877666442 45556677788888899987663 22334333211 11111145678888888888888 Q ss_pred eEEEEEEEEeeccc Q lcl|Aclame:pro 638 NYITLNMVATSTGA 651 (663) Q Consensus 638 e~i~~~~~~~~~~~ 651 (663) ..|+++|.-.-... T Consensus 356 k~it~~I~ldl~~~ 369 (369) T protein:vir:27 356 VKITIAISVKQGDY 369 (369) T ss_pred ceEEEEEEEeccCC Confidence 99999987765544 No 54 >protein:vir:4517 Length: 498 # NCBI annotation: tail sheath protein # Family: family:all:369 # MgeID: mge:97 # MgeName: V # Cross-refs: genbank:acc:NP_599043;genbank:gi:19549001;genbank:GeneID:935236 Probab=98.93 E-value=5.9e-09 Score=65.69 Aligned_cols=443 Identities=13% Similarity=0.066 Sum_probs=206.5 Q ss_pred Cc---------eecCceEEEEecCCCcccccCCCceEEEeec---ccCCCCcceEeCCHHHHHHHcCCcCCCchhHHHHH Q lcl|Aclame:pro 1 MA---------LLSPGIEMKETSINSTVVRSATGRAAIVGKF---AWGPAYEVRQVTNEVELVDMFGSPDNVTAPYFMSA 68 (663) Q Consensus 1 ~~---------~~~PGVyveEv~~~~~i~~v~Ts~~afvG~~---~~Gpv~~p~~i~s~~e~~~~FG~~~~~~~~~~~~~ 68 (663) |. +..||+|+|--.+.. ..+...--.-+||.. -..+.++|++|+|-.|-...|| ..+.+...++ T Consensus 1 M~IsF~~IP~~iRvP~~y~E~dns~A-~~~~~~q~vLiiGq~la~gs~~~~~~v~v~s~~~a~~lfG---~GSml~~M~~ 76 (498) T protein:vir:45 1 MTISFNTIPSNTLVPLFYAEMDNQAA-NTAQDSGASLLIGHANNGAEIVANSLVLMPSADYARQICG---AGSQLARMVE 76 (498) T ss_pred CCCchhhcCcccccCeEEEEEeCCCC-CCCCCCcceEEEEecCCccccccceeEEecCHHHHHHhcC---cCcHHHHHHH Confidence 33 457999999433333 222233456777765 3447899999999999999999 4666666677 Q ss_pred HHHhc-CCceEEEEEeccccccccccccccceeeeeccccccccccccccccccccccccceeeeeeecccceeeeeecc Q lcl|Aclame:pro 69 MNFLQ-YGNDLRLVRVIDMEKAKNASPLVNQVSVTITTEGQGYTVGDAITVKYNNATITEAGKVTAVDSDGKIKSLFVPT 147 (663) Q Consensus 69 ~~F~n-GG~~~~vvRv~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~v~~~~~~g~~~~~~~~~ 147 (663) .|..+ -=.++|++-+.+.... .....++.... .+..+.+.. ...|....+.... T Consensus 77 a~~~~n~~~~l~~i~~~d~aG~------aA~g~it~tg~------------------at~~G~l~l-~Igg~~v~v~V~~ 131 (498) T protein:vir:45 77 AYRQTDPFGELYVIAVPEATGA------AATVTLTVTGE------------------ATESGTVNV-YVGRTRVQAPVTN 131 (498) T ss_pred HHHHhCCcceEEEEeeCCcccc------eeEEEEEeecc------------------cCCCcEEEE-EECCEEEEEEecC Confidence 77664 4459999988652110 01111111100 000000000 0000000000000 Q ss_pred cchhcccccccccccceeceeeeecccccceeeeeecccccccccccccccccccccccccccccccccccccceeeecc Q lcl|Aclame:pro 148 AEIIAKTRQLGTYPTLGDNWRIDVSGASGGSAAALALGNIVVDSGVTFGNSEDAPAVMTSPAVMEKYAKFGMPLISAVYP 227 (663) Q Consensus 148 ~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ 227 (663) ++ .....+..+...+ .....+. + .+....+...++++.- T Consensus 132 gd--------------------------Taa~vA~al~aai----na~~~lP-----V------TA~~~~~~VtlTAr~k 170 (498) T protein:vir:45 132 GD--------------------------NVTTIASSIQDAI----NAVPTLP-----F------TASSSAGVVTLTARHK 170 (498) T ss_pred CC--------------------------CHHHHHHHHHHHH----hCCCCCc-----e------EEEecCceEEEEeecc Confidence 00 0000000000000 0000000 0 0000111223333334 Q ss_pred hhhccccccccccccccccccccceecccceecccceeEEEecccccccceeeeccCCcceeeEeeeecccccccccchh Q lcl|Aclame:pro 228 GEIGSTVEVEIVSKTAFNSGAQQTIYPFGGTRTSNARGVIQYGPMTDDQFAIIVRRDGIVVESTVLSTRKGDRDVYGSNI 307 (663) Q Consensus 228 g~~g~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 307 (663) |+.||.+++..... T Consensus 171 G~~GN~I~l~~~~~------------------------------------------------------------------ 184 (498) T protein:vir:45 171 GLCGNEIPVSLNYY------------------------------------------------------------------ 184 (498) T ss_pred CccccceeEEEeec------------------------------------------------------------------ Confidence 44443333321100 Q ss_pred hhhhhhcCCCceEEEEeecccCCccc-eeEEecCcccccccccchhhhHHHHHhhhhccccceeEEeeccCcCChhHHHH Q lcl|Aclame:pro 308 FMDDYFRNGGSNFIFASSEGWPAGFT-GIIQLGGGTSANADVGADELIKGWDLFSDREALHVNLMIAGACGSDGAEIAST 386 (663) Q Consensus 308 ~~~~~~~~~~s~~v~~~~~~~~~~~~-~~~~l~gg~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (663) ... ..+..|.... .+..+.||. +..|+..++..+.+. ..+++++|-.. ...... T Consensus 185 ------~~~-------~ge~~p~Glt~~itamagGa------g~PD~a~alaal~~~---~~~~I~~p~~D---~asL~a 239 (498) T protein:vir:45 185 ------GFG-------GGEVLPAGVQIAVATGTAGT------GAPVLTGAVAAMADE---PFDYIGLPFND---TASVNT 239 (498) T ss_pred ------ccc-------ccccccceeeEEEEccCCCc------cCchhHHHHHHhccC---CccEEEEeeCC---HHHHHH Confidence 000 0011111111 122233332 334555666666533 23445555432 222222 Q ss_pred HHHHHHHHH-----HhhCCeEEEecccccccccccccccHHHHHHHHhhcccccchhhhccCcCcceEEEecCceeeccc Q lcl|Aclame:pro 387 VQKYVVSLA-----DDRQDCVAIVNPPAELMVGIPTSTAVKNIVEWRNGMTGSGEVVDNNMNISSTYAFIIGNYKYQYDK 461 (663) Q Consensus 387 ~~~~~~~~~-----~~~~~~~~i~d~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~p~~~~~d~ 461 (663) +..+|.+.. -++++++++.-- ..+..++.+|... .++.|..+.+... T Consensus 240 l~~~L~~~sgRw~~~~q~~g~~~~a~----------~gT~~~l~t~g~~-------------~N~~~it~~~~~~----- 291 (498) T protein:vir:45 240 LVTEMNDTSGRWSYARQLYGHVYTAK----------TGTLSELVNAGDQ-------------FNQQHITLAGYEK----- 291 (498) T ss_pred HHHHHhhhhhhhhHHhhcCeEEEEec----------cCCHHHHHHhhhc-------------cCCceEEEEecCC----- Confidence 333232211 233445554321 2345666666543 5677776653211 Q ss_pred ccCceeEech---HHHHHHHHH---hhhhccCceecccceecceeecceeeeeecChhhhhhhhhCCceEEEEeeCCCcE Q lcl|Aclame:pro 462 YNDINRWVPL---AADIAGLCA---YTDQVSHPWMSPAGYRRGQIRNCIKLAIEPKQSMRDTMYQVAINPVTGFAGGDGF 535 (663) Q Consensus 462 ~~~~~~~~p~---s~~~AG~~a---~~d~~~g~~~span~~~~~i~~~~~~~~~~~~~~~~~Ln~~~in~i~~~~~~~G~ 535 (663) ...-|| ++.++|+.| +.|..| .--...+.||... .+...++..|++.|...||.++.. + .| T Consensus 292 ----~~~sp~~~~AAa~aa~~A~~l~~DPAr----PL~tl~L~Gi~~p-~~~~r~~~~ern~LL~~Gist~~V--~-~G- 358 (498) T protein:vir:45 292 ----ETQTPADELAASRTARAAVFIRNDPAR----PTQTGELVGMLPA-PKGKRFTMTEQQTLLSHGVATAYV--E-SG- 358 (498) T ss_pred ----CCCChHHHHHHHHHHHHHHHhhccccc----ccCceeecceecC-CchhcCChHHHHHHHhCCcceEEE--c-CC- Confidence 111133 233444444 344322 2222333333322 456678999999999999998854 2 35 Q ss_pred EEEcce--ec-------CCCCccceeeehhhHHHHHHHHHHHHHHH-hhcccCCHH-----------HHHHHHHHHHHHH Q lcl|Aclame:pro 536 VLFGDK--MA-------TQVPSPFDRINVRRLFNMLKKNIGDTSKY-ELFENNDAF-----------TRQSFRMETSQYL 594 (663) Q Consensus 536 ~~wG~r--T~-------~~~~~~~~~i~vrR~~~~i~~~~~~~~~~-~v~epn~~~-----------~~~~v~~~i~~~L 594 (663) ++.=.| |. ..| ..|..|+..|+.+|+.+.++..... |--+.+-.+ |-..||..+-.-+ T Consensus 359 ~V~I~R~ITTY~~n~~G~~D-~syLDi~T~~tl~yvr~~~r~~i~~kfpR~KLa~dg~~~~~gq~IvTp~~ir~ell~~y 437 (498) T protein:vir:45 359 VLRIQRDVTTYRKNAYGVAD-NSYLDSETLHTSAYVLRKLKSVITSKYGRHKLASDGTRFGPGQAIVTPAVIKGELLATY 437 (498) T ss_pred eEEEEeeeeeeeecCCCCcc-hhhhhhhhHHHHHHHHHHHHHHhhhhcCCeeecccCcccCCCCcccchHHHHHHHHHHH Confidence 233233 32 134 4699999999999999999988754 333333222 6678999999999 Q ss_pred HHHHhcCceEEE---E--EEEccCCCCHHHhhCCEEEEEEEEEecCcceE----EEEEEEEeeccc Q lcl|Aclame:pro 595 DGIRSLGGCYDF---R--VVCDTTNNTPNVIDRNEFVGTIYVKPPRSINY----ITLNMVATSTGA 651 (663) Q Consensus 595 ~~l~~~gal~g~---~--v~~d~~~nt~~~i~~G~~~~~i~~~p~~p~e~----i~~~~~~~~~~~ 651 (663) ++|..+|-+..+ . ++|.++.+ +..|+.+.+-...+.+++- |.|+++...+.+ T Consensus 438 ~~le~~givEn~~~~~~~LiVerd~~-----dpnRln~~~p~d~vn~L~V~A~~~~f~lq~~~~~~ 498 (498) T protein:vir:45 438 RQLERAGIVENYELFKQYLVVERDAS-----VPNRLNTLFPPDYVNQLRVFAVVNQFRLQYSEESA 498 (498) T ss_pred HhhhhhccccChhhhcceeEEEECCC-----CCcEEEEEecccccCchhhhhhhhhhheehhhcCC Confidence 999999999873 1 33332221 1246666665555555543 333333332222 No 55 >protein:vir:489 Length: 498 # NCBI annotation: putative sheath protein # Family: family:all:369 # MgeID: mge:11 # MgeName: P27 # Cross-refs: genbank:acc:NP_543096;swissprot:trembl:q8w623;genbank:gi:18249908;uniprot:Q8W623;genbank:GeneID:929698 Probab=98.89 E-value=1.4e-08 Score=63.63 Aligned_cols=443 Identities=10% Similarity=0.035 Sum_probs=206.0 Q ss_pred CceecCceEEEEecCCCcccccCCCceEEEeecc---cCCCCcceEeCCHHHHHHHcCCcCCCchhHHHHHHHHhc-CCc Q lcl|Aclame:pro 1 MALLSPGIEMKETSINSTVVRSATGRAAIVGKFA---WGPAYEVRQVTNEVELVDMFGSPDNVTAPYFMSAMNFLQ-YGN 76 (663) Q Consensus 1 ~~~~~PGVyveEv~~~~~i~~v~Ts~~afvG~~~---~Gpv~~p~~i~s~~e~~~~FG~~~~~~~~~~~~~~~F~n-GG~ 76 (663) =-+..||+|+|--.+. -..+..+--.-+||..- ..|.++|++|+|-.|-...|| ..+.+...++.|..+ -=. T Consensus 10 ~~iRvP~~y~E~dns~-A~~~~~~qrvLiiGq~la~gt~~~~~~v~v~s~~~a~~~fG---~GS~l~~M~~a~~~~n~~~ 85 (498) T protein:vir:48 10 SDTLVPLFYAEMDNSA-ANTAVTSAPALLIGHASNDAAIEVNSLVLMPSADYARQICG---AGSQLARMVDVYRQTDPFG 85 (498) T ss_pred cccccceEEEEEecCC-CccccCCcceEEEeecCccccccccceEEecCHHHHHHhcC---cccHHHHHHHHHHHhCCCc Confidence 2245799999954433 22233334567777643 347899999999999999999 466666666777664 556 Q ss_pred eEEEEEeccccccccccccccceeeeeccccccccccccccccccccccccceeeeeeecccceeeeeecccchhccccc Q lcl|Aclame:pro 77 DLRLVRVIDMEKAKNASPLVNQVSVTITTEGQGYTVGDAITVKYNNATITEAGKVTAVDSDGKIKSLFVPTAEIIAKTRQ 156 (663) Q Consensus 77 ~~~vvRv~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~v~~~~~~g~~~~~~~~~~~~~~~~~~ 156 (663) ++|++-+.+... . .....++.... .+..+.+.. .-.+....+....+ T Consensus 86 ~l~~i~~~D~ag--~----aA~g~it~tg~------------------at~~G~l~l-~Igg~~v~v~V~~g-------- 132 (498) T protein:vir:48 86 ELYVIAVPEARG--A----AATVRVTVTGE------------------AEESGTLSL-YVGRSSVQVPVVNG-------- 132 (498) T ss_pred eeEEEeeCCccc--c----eeEEEEEeccc------------------ccCCceEEE-EECCEEEEEeecCC-------- Confidence 899998865211 0 01111111100 000000000 00000000000000 Q ss_pred ccccccceeceeeeecccccceeeeeecccccccccccccccccccccccccccccccccccccceeeecchhhcccccc Q lcl|Aclame:pro 157 LGTYPTLGDNWRIDVSGASGGSAAALALGNIVVDSGVTFGNSEDAPAVMTSPAVMEKYAKFGMPLISAVYPGEIGSTVEV 236 (663) Q Consensus 157 ~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~g~~g~~v~v 236 (663) .... .+. ............ . ...+....+...++++.-|+.||.+++ T Consensus 133 ------------------dTaa-------~vA----~al~aai~a~~~---l-PVTA~~~~~~VtlTAr~kG~~GN~I~l 179 (498) T protein:vir:48 133 ------------------DDAT-------AVA----TAIKEAVNGVIT---L-PFAASSDAGVVTLTARHKGLYGNELPV 179 (498) T ss_pred ------------------CCHH-------HHH----HHHHHHHhCCCC---c-ceEEEecCcEEEEEeeeccccccccee Confidence 0000 000 000000000000 0 000000011122233333333333322 Q ss_pred ccccccccccccccceecccceecccceeEEEecccccccceeeeccCCcceeeEeeeecccccccccchhhhhhhhcCC Q lcl|Aclame:pro 237 EIVSKTAFNSGAQQTIYPFGGTRTSNARGVIQYGPMTDDQFAIIVRRDGIVVESTVLSTRKGDRDVYGSNIFMDDYFRNG 316 (663) Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (663) ..... ... T Consensus 180 ~~~~~------------------------------------------------------------------------~~~ 187 (498) T protein:vir:48 180 CLNYY------------------------------------------------------------------------GSG 187 (498) T ss_pred eeeec------------------------------------------------------------------------cCc Confidence 11000 000 Q ss_pred CceEEEEeecccCCccc-eeEEecCcccccccccchhhhHHHHHhhhhccccceeEEeeccCcCChhHHHHHHHHHHHHH Q lcl|Aclame:pro 317 GSNFIFASSEGWPAGFT-GIIQLGGGTSANADVGADELIKGWDLFSDREALHVNLMIAGACGSDGAEIASTVQKYVVSLA 395 (663) Q Consensus 317 ~s~~v~~~~~~~~~~~~-~~~~l~gg~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 395 (663) ..+..|.... .+..+.|| .+..|+..++..+.+. ..+++++|-... ... .++.+|+ T Consensus 188 -------~ge~~p~Glt~~itamsgG------ag~PDia~aLaal~~~---~~~~I~~p~~D~---asl----~al~~~L 244 (498) T protein:vir:48 188 -------GGEILPAGLQVVTEAGTAG------SGAPDLTAAVAAMGDE---AFDFIGLPFNDA---ASI----NMMMTEM 244 (498) T ss_pred -------ccccccceeeEEEEcccCC------ccCcchHHHHHhhccC---CccEEEEeecCH---HHH----HHHHHHH Confidence 0011111111 12223333 2334555666666533 234556654322 222 3333444 Q ss_pred H---------hhCCeEEEecccccccccccccccHHHHHHHHhhcccccchhhhccCcCcceEEEecCceeecccccCce Q lcl|Aclame:pro 396 D---------DRQDCVAIVNPPAELMVGIPTSTAVKNIVEWRNGMTGSGEVVDNNMNISSTYAFIIGNYKYQYDKYNDIN 466 (663) Q Consensus 396 ~---------~~~~~~~i~d~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~p~~~~~d~~~~~~ 466 (663) + ++++++++.-- ..+..++.+|... .++.|..+.+-. + . T Consensus 245 ~~~sgRw~~~~q~~g~~~~a~----------~gT~~~l~t~g~~-------------~N~~~it~~~~~--------~-~ 292 (498) T protein:vir:48 245 NDSSGRWSYARQLYGHVYTAK----------LGTLSELVNAGDM-------------HNQQHITLAGYE--------K-E 292 (498) T ss_pred hhhhhhhhHHhhcCeEEEEec----------cCCHHHHHHhhhc-------------cCCceEEEEecC--------C-C Confidence 2 23445554321 2345666666543 567777655311 1 1 Q ss_pred eEechH---HHHHHHHH---hhhhccCceecccceecceeecceeeeeecChhhhhhhhhCCceEEEEeeCCCcEEEEcc Q lcl|Aclame:pro 467 RWVPLA---ADIAGLCA---YTDQVSHPWMSPAGYRRGQIRNCIKLAIEPKQSMRDTMYQVAINPVTGFAGGDGFVLFGD 540 (663) Q Consensus 467 ~~~p~s---~~~AG~~a---~~d~~~g~~~span~~~~~i~~~~~~~~~~~~~~~~~Ln~~~in~i~~~~~~~G~~~wG~ 540 (663) ...|+. +.+|++.| +.|..| .--...+.||... .+...++..|++.|...||.++.. .++ -..+-=. T Consensus 293 ~~~p~~~~AAa~a~~aA~~l~~DPAr----PLqtl~L~Gi~~p-~~~~r~~~~ern~LL~~Gist~~V-~~G-~V~I~R~ 365 (498) T protein:vir:48 293 TQSPVDELVASRLAREAVFIRNDPAR----PTQTGELVGMLPA-PKGKRFIMTEQQTLLSHGVATAYV-EGG-TLRIQRS 365 (498) T ss_pred CCChHHHHHHHHHHHHHHhhhccccc----cccceeeeccccC-CchhcCChHHHHHHHhcCcceEEE-cCC-eEEEEee Confidence 111332 34444444 444332 1112333333322 456678999999999999998865 442 2333333 Q ss_pred eec-------CCCCccceeeehhhHHHHHHHHHHHHHHH-hhcccCCHH-----------HHHHHHHHHHHHHHHHHhcC Q lcl|Aclame:pro 541 KMA-------TQVPSPFDRINVRRLFNMLKKNIGDTSKY-ELFENNDAF-----------TRQSFRMETSQYLDGIRSLG 601 (663) Q Consensus 541 rT~-------~~~~~~~~~i~vrR~~~~i~~~~~~~~~~-~v~epn~~~-----------~~~~v~~~i~~~L~~l~~~g 601 (663) .|. ..| ..|..|+..|+.+|+.+.++..... |--+..-++ |-..||..+-.-+++|..+| T Consensus 366 ITTY~~n~~G~~D-~syLDi~T~~tl~yvr~~~r~~i~~kfpR~KLa~dg~~~~~gq~IvTp~~ir~eli~~y~~le~~g 444 (498) T protein:vir:48 366 VTTYKKNAYGVAD-NSYLDSETLHTSAYVLRKLKSVITSKYGRHKLANDGTRFGPGQAIVTPAVIKGELLATYRQMERAG 444 (498) T ss_pred eeeeeecCCCCcc-hhhhhhhhHHHHHHHHHHHHHHhhhhcCCceecccCcccCCCCcccchHHHHHHHHHHHHhhhhhc Confidence 332 234 4699999999999999999988753 333333332 67789999999999999999 Q ss_pred ceEEE---E--EEEccCCCCHHHhhCCEEEEEEEEEecCcceEEEEEEEEeecccchhhhhhhhhcC Q lcl|Aclame:pro 602 GCYDF---R--VVCDTTNNTPNVIDRNEFVGTIYVKPPRSINYITLNMVATSTGANFDELIGPMQLA 663 (663) Q Consensus 602 al~g~---~--v~~d~~~nt~~~i~~G~~~~~i~~~p~~p~e~i~~~~~~~~~~~~~~e~~~~~~~~ 663 (663) -+..+ . +.|.++.+ +..|+.+.+-...+.+++-+-.+ .+++=++++| T Consensus 445 iven~~~~~~~LiVerd~~-----dpnRln~~~p~d~vn~L~V~A~~----------~~f~lq~~~~ 496 (498) T protein:vir:48 445 IVENYDLFKQYLIVERDAD-----NPNRLNTLFPPDYVNQLRVFAVV----------NQFRLQYSEE 496 (498) T ss_pred cccChhhhcceeEEEECCC-----CCcEEEEEecccccCchhhhhhh----------hhhhhhhhhc Confidence 99873 2 33332221 12466666655555554433221 1222233333 No 56 >protein:vir:4463 Length: 498 # NCBI annotation: Tail Sheath protein # Family: family:all:369 # MgeID: mge:96 # MgeName: ST64B # Cross-refs: genbank:acc:NP_700386;genbank:gi:23505458;genbank:GeneID:955665 Probab=98.84 E-value=1.6e-08 Score=63.37 Aligned_cols=441 Identities=13% Similarity=0.071 Sum_probs=203.6 Q ss_pred Cc---------eecCceEEEEecCCCcccccCCCceEEEeecc---cCCCCcceEeCCHHHHHHHcCCcCCCchhHHHHH Q lcl|Aclame:pro 1 MA---------LLSPGIEMKETSINSTVVRSATGRAAIVGKFA---WGPAYEVRQVTNEVELVDMFGSPDNVTAPYFMSA 68 (663) Q Consensus 1 ~~---------~~~PGVyveEv~~~~~i~~v~Ts~~afvG~~~---~Gpv~~p~~i~s~~e~~~~FG~~~~~~~~~~~~~ 68 (663) |. +..||+|+|--.+... .....--.-+||..- ..|.++|++|+|-.|-...|| ..+.+...++ T Consensus 1 M~IsF~~IP~~iRvP~~y~E~dns~A~-~~~~~q~vLiiGq~la~gs~~~~~~v~v~s~~~a~~~fG---~GSml~~M~~ 76 (498) T protein:vir:44 1 MAISFNSIPSDTRVPLFYAEMDNSAAN-TARDSGASLLIGHASNDASIAVNSLVLVSSVDYARQICG---AGSQLARMVG 76 (498) T ss_pred CCCchhhcCcccccCeEEEEEeCCCCC-CCcCCcceEEEEecCcccccccceeEeecCHHHHHHhcC---cccHHHHHHH Confidence 43 4579999994333221 122223456777643 347899999999999999999 5666666777 Q ss_pred HHHhc-CCceEEEEEeccccccccccccccceeeeeccccccccccccccccccccccccceeeeeeecccceeeeeecc Q lcl|Aclame:pro 69 MNFLQ-YGNDLRLVRVIDMEKAKNASPLVNQVSVTITTEGQGYTVGDAITVKYNNATITEAGKVTAVDSDGKIKSLFVPT 147 (663) Q Consensus 69 ~~F~n-GG~~~~vvRv~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~v~~~~~~g~~~~~~~~~ 147 (663) .|..+ -=.++|++-+.+. .. .+ ....++.... .+..+.+.. ...+....+.... T Consensus 77 a~~~~n~~~~l~~i~~~D~-aG-~a----Atg~it~tg~------------------at~~G~l~l-~Igg~~v~v~V~~ 131 (498) T protein:vir:44 77 AYRKTDPFGELYVIAVPES-TG-AA----ATVALTVTGE------------------ATETGTVNV-YTGRTRVQAPVTS 131 (498) T ss_pred HHHHhCCCceeEEEecCCc-cc-ce----eEEEEEeecc------------------cCCCcEEEE-EECCEEEEEEecC Confidence 77765 5568999977542 11 10 0111111100 000000000 0000000000000 Q ss_pred cchhcccccccccccceeceeeeecccccceeeeeecccccccccccccccccccccccccccccccccccccceeeecc Q lcl|Aclame:pro 148 AEIIAKTRQLGTYPTLGDNWRIDVSGASGGSAAALALGNIVVDSGVTFGNSEDAPAVMTSPAVMEKYAKFGMPLISAVYP 227 (663) Q Consensus 148 ~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ 227 (663) ++ .....+..+...+. ....++ + .+....+...++++.- T Consensus 132 gd--------------------------Taa~vA~al~aain----a~~~lP-----V------TA~~~~~~vtlTAr~k 170 (498) T protein:vir:44 132 GD--------------------------DAAAVAVSIKDAVN----ANPDLP-----F------TATSEAGVVTLTARHK 170 (498) T ss_pred CC--------------------------CHHHHHHHHHHHHh----CCCCCc-----e------EEeeccceEEEEEecc Confidence 00 00000000000000 000000 0 0000011122333333 Q ss_pred hhhccccccccccccccccccccceecccceecccceeEEEecccccccceeeeccCCcceeeEeeeecccccccccchh Q lcl|Aclame:pro 228 GEIGSTVEVEIVSKTAFNSGAQQTIYPFGGTRTSNARGVIQYGPMTDDQFAIIVRRDGIVVESTVLSTRKGDRDVYGSNI 307 (663) Q Consensus 228 g~~g~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 307 (663) |+.||.+++..... T Consensus 171 G~~GN~I~l~~~~~------------------------------------------------------------------ 184 (498) T protein:vir:44 171 GLYGNEIPVTLNYY------------------------------------------------------------------ 184 (498) T ss_pred CcccCcceEEEeec------------------------------------------------------------------ Confidence 33333333221000 Q ss_pred hhhhhhcCCCceEEEEeecccCCccc-eeEEecCcccccccccchhhhHHHHHhhhhccccceeEEeeccCcCChhHHHH Q lcl|Aclame:pro 308 FMDDYFRNGGSNFIFASSEGWPAGFT-GIIQLGGGTSANADVGADELIKGWDLFSDREALHVNLMIAGACGSDGAEIAST 386 (663) Q Consensus 308 ~~~~~~~~~~s~~v~~~~~~~~~~~~-~~~~l~gg~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (663) ... ..+..|.+.. .+..+.|| .+..|+..++..+.+. ..+++++|-... ... T Consensus 185 ------~~~-------~ge~~p~Glt~titamsgG------ag~PDia~alaal~~~---~~~~i~~p~~D~---asl-- 237 (498) T protein:vir:44 185 ------GFG-------GGEVLPAGVNITVASGVKG------AGAPALNDAVAAMGDE---PFDYIGLPFNDT---ASV-- 237 (498) T ss_pred ------cCc-------cccccccceeEEEEcccCC------ccCchhHHHHHhhccC---CccEEEEeecCH---HHH-- Confidence 000 0011111111 12223333 2344566666666543 234556554322 222 Q ss_pred HHHHHHHHHH---------hhCCeEEEecccccccccccccccHHHHHHHHhhcccccchhhhccCcCcceEEEecCcee Q lcl|Aclame:pro 387 VQKYVVSLAD---------DRQDCVAIVNPPAELMVGIPTSTAVKNIVEWRNGMTGSGEVVDNNMNISSTYAFIIGNYKY 457 (663) Q Consensus 387 ~~~~~~~~~~---------~~~~~~~i~d~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~p~~~ 457 (663) .++.+|++ ++++.+++... ..+..++.+|... .++.|..+.+...- T Consensus 238 --~al~~~L~~~sgRw~~~~q~~g~~~~a~----------~gT~a~l~t~g~~-------------~N~~~it~~~~~~~ 292 (498) T protein:vir:44 238 --NSMATEMNDSSGRWSYVRQLYGHVYTAK----------TGTLSELVAAGDQ-------------FNLQHITLAGYEKD 292 (498) T ss_pred --HHHHHHHhhhhcchHHHhhcCeEEEEec----------cCCHHHHHHhhhc-------------cCCceEEEEecCCC Confidence 33334442 23444554322 2345566666543 56677766432111 Q ss_pred ecccccCceeEechH---HHHHHHHH---hhhhccCceecccceecceeecceeeeeecChhhhhhhhhCCceEEEEeeC Q lcl|Aclame:pro 458 QYDKYNDINRWVPLA---ADIAGLCA---YTDQVSHPWMSPAGYRRGQIRNCIKLAIEPKQSMRDTMYQVAINPVTGFAG 531 (663) Q Consensus 458 ~~d~~~~~~~~~p~s---~~~AG~~a---~~d~~~g~~~span~~~~~i~~~~~~~~~~~~~~~~~Ln~~~in~i~~~~~ 531 (663) ...|+- +.++++.| +.|..| .--...+.||.. ..+...++..|++.|...||.++.. + T Consensus 293 ---------~~sp~~~~AAa~a~~aA~~l~~DPAr----PL~tl~L~Gi~~-p~~~~r~~~~ern~LL~~Gist~~V--~ 356 (498) T protein:vir:44 293 ---------TQTPADELAASRTARAAVFIRNDPAR----PTQTGELVDMLP-APKGKRFTTTEQQTLLSHGVATAYV--E 356 (498) T ss_pred ---------CCCHHHHHHHHHHHHHHHHhhccccc----ccCceeeccccc-CCchhcCChHHHHHHHhcCcceEEE--c Confidence 111332 33444444 344322 111233333322 1446778999999999999998854 2 Q ss_pred CCcEEEEcce--ec-------CCCCccceeeehhhHHHHHHHHHHHHHHH-hhcccCCH-----------HHHHHHHHHH Q lcl|Aclame:pro 532 GDGFVLFGDK--MA-------TQVPSPFDRINVRRLFNMLKKNIGDTSKY-ELFENNDA-----------FTRQSFRMET 590 (663) Q Consensus 532 ~~G~~~wG~r--T~-------~~~~~~~~~i~vrR~~~~i~~~~~~~~~~-~v~epn~~-----------~~~~~v~~~i 590 (663) .| ++.=.| |. ..| ..|..|+..|+.+|+.+.++..... |--+..-+ -|-..||..+ T Consensus 357 -~G-~V~I~R~ITTY~~n~~G~~D-~syLDi~T~~tl~yvr~~~r~~i~~kfpR~KLa~d~~~~~~gq~IvTp~~ir~el 433 (498) T protein:vir:44 357 -SG-VLRIQRDITTYRKNAYGVAD-NSYLDSETLHTSAYVLRRLKSVITSKYGRHKLANDGTRFGSGQAIVTPAVIRGEL 433 (498) T ss_pred -CC-eEEEEeeeeeeeecCCCCcc-hhhhhhhhHHHHHHHHHHHHHHhhhhcCCcccccCCcccCCCcccccHHHHHHHH Confidence 35 233233 32 134 4699999999999999999988753 33333222 2677899999 Q ss_pred HHHHHHHHhcCceEEE---E--EEEccCCCCHHHhhCCEEEEEEEEEecCcceEEEEEEEEeecccchhhhhhhhhcC Q lcl|Aclame:pro 591 SQYLDGIRSLGGCYDF---R--VVCDTTNNTPNVIDRNEFVGTIYVKPPRSINYITLNMVATSTGANFDELIGPMQLA 663 (663) Q Consensus 591 ~~~L~~l~~~gal~g~---~--v~~d~~~nt~~~i~~G~~~~~i~~~p~~p~e~i~~~~~~~~~~~~~~e~~~~~~~~ 663 (663) -.-+++|...|-+..+ . ++|.++.+ +..|+.+.+-...+.+++-+-.+ .+++=+++++ T Consensus 434 i~~y~~le~~givEn~~~~~~~LiVerd~~-----dpnRln~~~p~d~vn~L~V~A~~----------~~f~lq~~~~ 496 (498) T protein:vir:44 434 GSTYRQMEREGIVENFDLFQQHLIVERNAN-----DSNRLDVLFPPDYVNQLRVFAVL----------NQFRLQYSEE 496 (498) T ss_pred HHHHHhhhhhccccChhhhcceeEEEECCC-----CCcEEEEEecccccCchhhhhhh----------hhhhhhhhhh Confidence 9999999999999873 1 33332211 12566666665555555433222 1222233333 No 57 >protein:vir:95263 Length: 450 # NCBI annotation: Phage conserved protein # Family: family:all:396 # MgeID: mge:1561 # MgeName: Felix 01 # Cross-refs: genbank:acc:NP_944896;genbank:gi:38707836;genbank:GeneID:2744049 Probab=98.56 E-value=2.7e-07 Score=56.56 Aligned_cols=411 Identities=10% Similarity=-0.019 Sum_probs=169.1 Q ss_pred cccchhcccccccccccceeceeeeecccccceeeeeeccccccccccccccccccccccc---ccccccccccc----- Q lcl|Aclame:pro 146 PTAEIIAKTRQLGTYPTLGDNWRIDVSGASGGSAAALALGNIVVDSGVTFGNSEDAPAVMT---SPAVMEKYAKF----- 217 (663) Q Consensus 146 ~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~----- 217 (663) --.++.+....+.+....... ++... ..++...+.+... +.......-.. T Consensus 1 ~~s~iVnV~i~~~~~a~~~~~-----------------f~~~l-----~~~~~~~~~~r~~~yss~~~V~~~FG~~S~ey 58 (450) T protein:vir:95 1 MWNPIVNVDITLNTAGTTREG-----------------FGLPL-----FLASTDNFEERVRGYTSLTEVAEDFDENTAAY 58 (450) T ss_pred CCCceEEEeeccccccccccc-----------------ceeEE-----EEcCCCCCccceeeecCHHHHHHhcCCCcHHH Confidence 000000100010000000000 00000 0000000000000 00000000000 Q ss_pred --------cccceeeecchhhccccccccccccccccccccceecccceecccceeEEEecccccccceeeeccCCccee Q lcl|Aclame:pro 218 --------GMPLISAVYPGEIGSTVEVEIVSKTAFNSGAQQTIYPFGGTRTSNARGVIQYGPMTDDQFAIIVRRDGIVVE 289 (663) Q Consensus 218 --------~~~~~~a~~~g~~g~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 289 (663) ..+......-|-|...-+.... .......+. .+.+..+|.... T Consensus 59 ~aA~~yF~q~p~p~~l~igr~~~~~t~~~~---------------------------~~~~~~~~g--~lt~tv~G~~~~ 109 (450) T protein:vir:95 59 KAAKQLWSQTPKVTQLYIGRRAMQYTVSIP---------------------------DAVTESTDY--SITVAAGGGISQ 109 (450) T ss_pred HHHHHHHhCCCcccEEEEEeeccchhhhhh---------------------------hhhccccce--eEEEEecceeee Confidence 0011111111111110000000 000000011 111111222111 Q ss_pred eEeeeecccccccccchhhhhhhhcCCCceEEEEeecccCCccceeEE-----------ecCccc--ccccccchhhhHH Q lcl|Aclame:pro 290 STVLSTRKGDRDVYGSNIFMDDYFRNGGSNFIFASSEGWPAGFTGIIQ-----------LGGGTS--ANADVGADELIKG 356 (663) Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~v~~~~~~~~~~~~~~~~-----------l~gg~d--~~~~~~~~~~~~~ 356 (663) ...+. .....+...........+.......-................ +..... .......++...+ T Consensus 110 ~~~i~-~s~a~s~~~va~~~~tai~~~~~~~~~~~~~s~g~~~~~t~~~~~~~~~~~~~l~~~~~~~~~~g~~aet~~~a 188 (450) T protein:vir:95 110 PYQYT-AQSSDTAENVLQQFKTQIEADPTIKDKVSVNVTGSNGSATMIIAKAGDNDFVKVTTTAQTVYIASTTADTASTA 188 (450) T ss_pred eeEEE-EEecCChhhHHHHhhhhhcccceeeeeeeeeeecccceeeeeeeccccchhhccccccceeEecccccccHHHH Confidence 11111 111111111111111111111000000000000000000000 000000 0000112233444 Q ss_pred HHHhhhhccccceeEEeeccCcCChhHHHHHHHHHHHHHHhhCCeEEEecccccccccccccccHHHHHHHHhhcccccc Q lcl|Aclame:pro 357 WDLFSDREALHVNLMIAGACGSDGAEIASTVQKYVVSLADDRQDCVAIVNPPAELMVGIPTSTAVKNIVEWRNGMTGSGE 436 (663) Q Consensus 357 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~d~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 436 (663) +..+.+... +--.++... . +.++ ..++..+++....+|.....-........ .....++..... T Consensus 189 ~~a~~~~~~-~w~~~~~~~--~-~~~~----i~a~a~w~~a~~~~f~~~~~~~~~~~~~~-~~~~~~i~~~l~------- 252 (450) T protein:vir:95 189 LAAIEAYST-DWYFIAAED--R-TQQF----VLAMASEIQARKKIFFTANSDVTALQGTE-LASANDVPAQLA------- 252 (450) T ss_pred HHHHHHhhC-CeEEEEecC--C-CHHH----HHHHHHHHhhcCcEEEEEcCCchhhhhhh-hhcccchHHHHH------- Confidence 444433221 111122211 1 1122 24455666655545554321100000000 000000000000 Q ss_pred hhhhccCcCcceEEEecCceeecccccCceeEechHHHHHHHHHhhhhccCceecccceecceeecce--eeeeecChhh Q lcl|Aclame:pro 437 VVDNNMNISSTYAFIIGNYKYQYDKYNDINRWVPLAADIAGLCAYTDQVSHPWMSPAGYRRGQIRNCI--KLAIEPKQSM 514 (663) Q Consensus 437 ~~~~~~~~~s~~~~~~~p~~~~~d~~~~~~~~~p~s~~~AG~~a~~d~~~g~~~span~~~~~i~~~~--~~~~~~~~~~ 514 (663) ..+ .++-+.+|++ .+. .-.+.+.++|.....+.-+=-|+ +|.+.+|..-+ .....++..| T Consensus 253 ----~~~-~~~t~~~y~~-------~~~---~~~~~aa~~g~~~~~~~g~~T~~---fk~l~Gv~~~v~~~~~~~lt~~~ 314 (450) T protein:vir:95 253 ----KNM-YTRTVCLWHH-------AAA---EDYPEMAYIAYGAPYDAGSIAWG---NAQLTGVAASLQPSNQRPLTSIQ 314 (450) T ss_pred ----hcc-CCeeEEEeeC-------CCc---hhHHHHHHHHHhhhcccceeeec---cccccceeeeccCccccccchHH Confidence 000 0112223322 111 11355666676555443332343 66555554311 1124578999 Q ss_pred hhhhhhCCceEEEEeeCCCcEEEEcceecCCCCccceeeehhhHHHHHHHHHHHHHHHhhc------ccCCHHHHHHHHH Q lcl|Aclame:pro 515 RDTMYQVAINPVTGFAGGDGFVLFGDKMATQVPSPFDRINVRRLFNMLKKNIGDTSKYELF------ENNDAFTRQSFRM 588 (663) Q Consensus 515 ~~~Ln~~~in~i~~~~~~~G~~~wG~rT~~~~~~~~~~i~vrR~~~~i~~~~~~~~~~~v~------epn~~~~~~~v~~ 588 (663) .+.|..+++|++..+.+ .++ ++..+|+++ .||-++|-.+|++..|++.+...+- =|-|+.-...|+. T Consensus 315 ~~al~~~~~n~y~~~~~-~~~-~~~G~~~~G-----~~iD~~~~~~wl~~~iq~~l~~ll~~~~~~KiPy~~~G~~~i~a 387 (450) T protein:vir:95 315 KSALDVRHCNFIDLDGG-VPV-VRRGITSGG-----EWIDIIRGVDWLESDLKTSLRDLLINQKGGKITYDDTGITRIRQ 387 (450) T ss_pred HHHHHhCCcEEEEEecC-cee-eeCCeeeCc-----chhHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccChhhHHHHHH Confidence 99999999999988754 444 788888875 3688999999999999999987652 2667788888999 Q ss_pred HHHHHHHHHHhcCceEEEEEEEc-cCCCCHHHhhCCEEE-EEEEEEecCcceEEEEEEEEeec Q lcl|Aclame:pro 589 ETSQYLDGIRSLGGCYDFRVVCD-TTNNTPNVIDRNEFV-GTIYVKPPRSINYITLNMVATST 649 (663) Q Consensus 589 ~i~~~L~~l~~~gal~g~~v~~d-~~~nt~~~i~~G~~~-~~i~~~p~~p~e~i~~~~~~~~~ 649 (663) .|+.-|++.+++|.|.||.|.+. .+..++.|+.++++. +.+.++....++++.++...+-+ T Consensus 388 ~i~~~l~~a~~~G~Ia~~~V~~~~~~~~~~~dr~~R~~~~i~~~~~laGAIh~~~i~~~v~~~ 450 (450) T protein:vir:95 388 VIETSLQRAVNRNFLSSYTVNVPKASQVALADKKARILKDVTFAGILAGAILDVDLKGTVAYE 450 (450) T ss_pred HHHHHHHHHHhcCcccceeEecCChHhcCHHHHhccCCCCeeEEEEEccceEEEEEEEEEEeC Confidence 99999999999999999999999 678899999998874 89999999999999999888766 No 58 >protein:vir:1996 Length: 495 # NCBI annotation: major tail subunit # Family: family:all:369 # MgeID: mge:320 # MgeName: Mu # Cross-refs: genbank:acc:NP_050643;genbank:gi:9633530;genbank:GeneID:2636269 Probab=98.43 E-value=6.7e-07 Score=54.44 Aligned_cols=442 Identities=12% Similarity=0.069 Sum_probs=205.0 Q ss_pred CceecCceEEEEecCCCcccccCC--CceEEEeec---ccCCCCcceEeCCHHHHHHHcCCcCCCchhHHHHHHHHh-cC Q lcl|Aclame:pro 1 MALLSPGIEMKETSINSTVVRSAT--GRAAIVGKF---AWGPAYEVRQVTNEVELVDMFGSPDNVTAPYFMSAMNFL-QY 74 (663) Q Consensus 1 ~~~~~PGVyveEv~~~~~i~~v~T--s~~afvG~~---~~Gpv~~p~~i~s~~e~~~~FG~~~~~~~~~~~~~~~F~-nG 74 (663) =-+..||+|+| ++.+.-+.+..+ --.-+||.. -..|.++|++|+|-.|-...|| ..+.+...++.|.. |- T Consensus 11 ~~iRvP~~y~E-~dns~A~~g~~~~~q~vLiiGq~la~gs~~~~~pv~v~s~~~a~~~fG---~GS~la~M~~a~~~~n~ 86 (495) T protein:vir:19 11 SDVRVPLTYIE-FDNSNAVSGTPAPRQRVLMFGQSGSKASAAPNVPVRIRSGSQASAAFG---QGSMLALMADAFLNANR 86 (495) T ss_pred cccccCeEEEE-EccCCCCcCCcCCCceEEEEEecCcccccccceeEEecCHHHHHHhcC---cCcHHHHHHHHHHHhCC Confidence 23567999998 554433333333 344677763 3457899999999999999999 45666666666665 46 Q ss_pred CceEEEEEeccccccccccccccceeeeeccccccccccccccccccccccccceeeeeeecccceeeeeecccchhccc Q lcl|Aclame:pro 75 GNDLRLVRVIDMEKAKNASPLVNQVSVTITTEGQGYTVGDAITVKYNNATITEAGKVTAVDSDGKIKSLFVPTAEIIAKT 154 (663) Q Consensus 75 G~~~~vvRv~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~v~~~~~~g~~~~~~~~~~~~~~~~ 154 (663) -.++|++-+.+... .+ ....++.... .+..+.+. ..-.|....+....++ T Consensus 87 ~~~l~~i~~~D~aG--~a----A~g~it~tg~------------------at~~G~l~-l~I~g~~v~v~V~~gd----- 136 (495) T protein:vir:19 87 VAELWCIPQGNGTG--NA----AVGEISLSGT------------------AGENGSLV-TYIAGQRLAVSVAAGA----- 136 (495) T ss_pred cceEEEEeeCChhh--ce----eEEEEEEeec------------------CCCCcEEE-EEECCEEEEEEecCCC----- Confidence 67999998865211 10 0111111100 00000000 0000000000000000 Q ss_pred ccccccccceeceeeeecccccceeeeeecccccccccccccccccccc--cccccc--cccccccccccceeeecchhh Q lcl|Aclame:pro 155 RQLGTYPTLGDNWRIDVSGASGGSAAALALGNIVVDSGVTFGNSEDAPA--VMTSPA--VMEKYAKFGMPLISAVYPGEI 230 (663) Q Consensus 155 ~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~--~~~~~~~~~~~~~~a~~~g~~ 230 (663) ... .+. ........... .++... ........+...++++.-|+. T Consensus 137 ---------------------Taa-------~vA----~al~aaina~~~lPvTA~~~~~~~~~~a~~~VtlTAr~kG~~ 184 (495) T protein:vir:19 137 ---------------------TGA-------ALA----DLLVARIKGQPDLPVTAEVRADSGDDDTHADVVLSAKFTGAL 184 (495) T ss_pred ---------------------CHH-------HHH----HHHHHHhcCCccCceEEEeeccCCCCcCceeEEEEEeecccc Confidence 000 000 00000000000 000000 000000000011111111110 Q ss_pred ccccccccccccccccccccceecccceecccceeEEEecccccccceeeeccCCcceeeEeeeecccccccccchhhhh Q lcl|Aclame:pro 231 GSTVEVEIVSKTAFNSGAQQTIYPFGGTRTSNARGVIQYGPMTDDQFAIIVRRDGIVVESTVLSTRKGDRDVYGSNIFMD 310 (663) Q Consensus 231 g~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (663) |.+++. +.. + T Consensus 185 -n~idi~-------------------------------------------~~~-------------------------~- 194 (495) T protein:vir:19 185 -SAVDVR-------------------------------------------WNY-------------------------Y- 194 (495) T ss_pred -ccceeE-------------------------------------------EEe-------------------------e- Confidence 000000 000 0 Q ss_pred hhhcCCCceEEEEeecccCCccc-eeEEecCcccccccccchhhhHHHHHhhhhccccceeEEeeccCcCChhHHHHHHH Q lcl|Aclame:pro 311 DYFRNGGSNFIFASSEGWPAGFT-GIIQLGGGTSANADVGADELIKGWDLFSDREALHVNLMIAGACGSDGAEIASTVQK 389 (663) Q Consensus 311 ~~~~~~~s~~v~~~~~~~~~~~~-~~~~l~gg~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 389 (663) ..+..|.+.. .+..+.||. +..|+..++..+.+. ..+++++|-.. ... .. T Consensus 195 -------------~ge~~p~Glt~titamsgGa------g~PDia~alaal~~~---~~~~I~~P~tD---~as----L~ 245 (495) T protein:vir:19 195 -------------AGETTPYGIITAFKAASGKN------GNPDISASIAGMGDL---QYKYIVMPYTD---EPN----LN 245 (495) T ss_pred -------------cccccccceeEEEEecCCCC------CCcchHHHHHHhccC---CCcEEEEecCc---HHH----HH Confidence 0011111111 122333332 344566666666533 24455554322 112 34 Q ss_pred HHHHHHHhh------CCeEEEecccccccccccccccHHHHHHHHhhcccccchhhhccCcCcceEEEecCceeeccccc Q lcl|Aclame:pro 390 YVVSLADDR------QDCVAIVNPPAELMVGIPTSTAVKNIVEWRNGMTGSGEVVDNNMNISSTYAFIIGNYKYQYDKYN 463 (663) Q Consensus 390 ~~~~~~~~~------~~~~~i~d~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~p~~~~~d~~~ 463 (663) ++.+|++.+ ++++++.-. ..+..+..+|... .++.|..+.+ +. T Consensus 246 al~~~l~~rw~~~~q~~g~~~~a~----------~gT~~~l~t~g~~-------------~N~~~it~~~--~~------ 294 (495) T protein:vir:19 246 LLRTELQERWGPVNQADGFAVTVL----------SGTYGDISTFGVS-------------RNDHLISCMG--IA------ 294 (495) T ss_pred HHHHHHHHhhhHHHhcCeEEEEee----------cCCHHHHHHhhhc-------------cCCceEEEEe--cC------ Confidence 566666643 344544321 2344555555543 5666766642 11 Q ss_pred CceeEechHHHHHHHHHhhh--hccCceecccceecceeecceeeeeecChhhhhhhhhCCceEEEEeeCCCcEEEEcce Q lcl|Aclame:pro 464 DINRWVPLAADIAGLCAYTD--QVSHPWMSPAGYRRGQIRNCIKLAIEPKQSMRDTMYQVAINPVTGFAGGDGFVLFGDK 541 (663) Q Consensus 464 ~~~~~~p~s~~~AG~~a~~d--~~~g~~~span~~~~~i~~~~~~~~~~~~~~~~~Ln~~~in~i~~~~~~~G~~~wG~r 541 (663) + ..-||....|++.++.- .+..|-+.--...+.||... .+...++..|++.|...||.++..-.++ -..+-=.. T Consensus 295 g--sp~~~~~~AAA~aa~~A~~l~~DPArPL~tl~L~Gi~~p-~~~~r~~~~ern~LL~~Gist~~V~~~G-~V~I~R~I 370 (495) T protein:vir:19 295 G--APEPSYLYAATLCAVASQALSIDPARPLQTLTLPGRMPP-AVGDRFTWSERNALLFDGISTFNVNDGG-EMQIERMI 370 (495) T ss_pred C--CCCcHHHHHHHHHHHHHHHhhcccccccCceeecceecC-CccccCChHHHHHHHhCCcceEEECCCC-eEEEEeee Confidence 1 11244333333322221 12223222222333334322 4567789999999999999887543331 12232222 Q ss_pred ec-------CCCCccceeeehhhHHHHHHHHHHHHHHH-hhcccCCHH-----------HHHHHHHHHHHHHHHHHhcCc Q lcl|Aclame:pro 542 MA-------TQVPSPFDRINVRRLFNMLKKNIGDTSKY-ELFENNDAF-----------TRQSFRMETSQYLDGIRSLGG 602 (663) Q Consensus 542 T~-------~~~~~~~~~i~vrR~~~~i~~~~~~~~~~-~v~epn~~~-----------~~~~v~~~i~~~L~~l~~~ga 602 (663) |. ..| ..|..|++-|+.+|+.+.++..... |--+.+-+. |-..||..+-+-+++|...|- T Consensus 371 TTY~~n~~G~~D-~syLDi~T~~tl~yvr~~~r~~i~~kfpR~KLa~d~~~~~~gq~IvTp~~ir~ell~~~~~le~~gi 449 (495) T protein:vir:19 371 TMYRTNKYGDSD-PSYLNVNTIATLSYLRYSLRTRITQKFPNYKLASDGTRFATGQAVVTPSVIKTELLALFEEWENAGL 449 (495) T ss_pred eeeeecCCCCcc-hhhhhhHHHHHHHHHHHHHHHHHhhhcCCcccccCCCCCCCcccccChHHHHHHHHHHHHhhhhhcc Confidence 32 134 4699999999999999999987753 333333222 567899999999999999999 Q ss_pred eEEE---E--EEEccCCCCHHHhhCCEEEEEEEEEecCcceEEEEEEEEee Q lcl|Aclame:pro 603 CYDF---R--VVCDTTNNTPNVIDRNEFVGTIYVKPPRSINYITLNMVATS 648 (663) Q Consensus 603 l~g~---~--v~~d~~~nt~~~i~~G~~~~~i~~~p~~p~e~i~~~~~~~~ 648 (663) +..+ . +.|.++-+ +.+|+.+.+-...+.+++-+-.+++..= T Consensus 450 ven~~~~~~~LiVerd~~-----dpnRln~~~p~d~vn~L~V~A~~i~f~L 495 (495) T protein:vir:19 450 VEDFDTFKEELYVARNKD-----DKDRLDVLCGPNLINQFRIFAAQVQFIL 495 (495) T ss_pred ccChhhhcceeEEEECCC-----CCcEEEEEecceeeCceeeeeeeeeeeC Confidence 9873 2 33332221 1367878777777777665555444322 No 59 >protein:vir:80052 Length: 331 # NCBI annotation: gp14 # Family: family:all:396 # MgeID: mge:1876 # MgeName: B054 # Cross-refs: genbank:acc:YP_001468718;genbank:gi:157325298;genbank:GeneID:5601743 Probab=98.21 E-value=2.6e-06 Score=51.25 Aligned_cols=308 Identities=13% Similarity=0.027 Sum_probs=153.0 Q ss_pred cccccceeeeccC---Cccee--eE--eeeecccccccccchh-hhhhhhcCCCceEEEEee-cccCCccceeEEecCcc Q lcl|Aclame:pro 272 MTDDQFAIIVRRD---GIVVE--ST--VLSTRKGDRDVYGSNI-FMDDYFRNGGSNFIFASS-EGWPAGFTGIIQLGGGT 342 (663) Q Consensus 272 ~~~~~~~~~~~~~---g~~~~--~~--~~~~~~~~~~~~~~~~-~~~~~~~~~~s~~v~~~~-~~~~~~~~~~~~l~gg~ 342 (663) ..+....+.+..+ ..... .+ .+............+. .+..-+......+..+.. ..... ....+..+. T Consensus 1 ~~~~iv~V~v~~~~~~~~~~~~~~~~~~~~~~t~~~~~~y~s~~~v~~d~~~~~~~Ykaa~~~f~Q~~---~~~~i~v~~ 77 (331) T protein:vir:80 1 MVETITDVRVHISVLYPSPRIGLGRPAIFVKGTAMGYKEYTTLEELKDTFADNTEVYAKAKAVFLQKD---RPDTVAVIT 77 (331) T ss_pred CccceecceeeecccccccccccCcceeEEeccccceEEEechhhhccCCCCCcHHHHHHHHHHhccC---ccceEEEec Confidence 0011101111000 00000 00 0000000000000000 000000000000000000 00000 000000000 Q ss_pred cccccccchhhhHHHHHhhhhccccceeEEeeccCcCChhHHHHHHHHHHHHHHhhCCeEEEecccccccccccccccHH Q lcl|Aclame:pro 343 SANADVGADELIKGWDLFSDREALHVNLMIAGACGSDGAEIASTVQKYVVSLADDRQDCVAIVNPPAELMVGIPTSTAVK 422 (663) Q Consensus 343 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~d~p~~~~~~~~~~~~~~ 422 (663) ....+...++...... .--.+++.. . +.++ ..++..+++....+|.+++.. ... T Consensus 78 -----~~~~~~~~a~~a~~~~---~w~~~~~~~--~-~~~~----~~a~a~~~~a~~~~f~~~~~~-----------~~~ 131 (331) T protein:vir:80 78 -----YEDTKLLEAAEAYFLK---SWHFALLAE--F-KAAD----ALALSNLIEEQKFKFAVFQVT-----------AVA 131 (331) T ss_pred -----cchHHHHHHHHHhccC---ceeEEEeec--C-CHHH----HHHHHHHHhhCCcEEEEEecC-----------chH Confidence 0011112222211111 111122221 1 1122 235556666666666665421 111 Q ss_pred HHHHHHhhcccccchhhhccCcCcceEEEecCceeecccccCceeEechHHHHHHHHHhhhhccCceecccceecceeec Q lcl|Aclame:pro 423 NIVEWRNGMTGSGEVVDNNMNISSTYAFIIGNYKYQYDKYNDINRWVPLAADIAGLCAYTDQVSHPWMSPAGYRRGQIRN 502 (663) Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~p~~~~~d~~~~~~~~~p~s~~~AG~~a~~d~~~g~~~span~~~~~i~~ 502 (663) ++.... -.+..+.++++. .. --+.+.+.|.++..+.-+--| +++. .+.| T Consensus 132 ~~~~~~---------------~~~~t~~~~~~~-------~~----~~~~aa~~g~~~~~~~g~~t~---~fk~--~l~G 180 (331) T protein:vir:80 132 DITPLA---------------KNTRTIAIVHSK-------TG----EKLDAALIGNVASLPVGSATW---KGRH--GLAG 180 (331) T ss_pred HHHHhh---------------ccccEEEEEcCC-------cc----chhHHHHHHHHHhcCccceee---eeec--ccCC Confidence 111110 012233444331 11 123566677777776533223 2442 1233 Q ss_pred ceeeeeecChhhhhhhhhCCceEEEEeeCCCcEEEEcceecCCCCccceeeehhhHHHHHHHHHHHHHHHhhc----ccC Q lcl|Aclame:pro 503 CIKLAIEPKQSMRDTMYQVAINPVTGFAGGDGFVLFGDKMATQVPSPFDRINVRRLFNMLKKNIGDTSKYELF----ENN 578 (663) Q Consensus 503 ~~~~~~~~~~~~~~~Ln~~~in~i~~~~~~~G~~~wG~rT~~~~~~~~~~i~vrR~~~~i~~~~~~~~~~~v~----epn 578 (663) +. ...++..|++.|..+++|++..+.+ . ..++...|+++ .||-+.+-.+|++..|++.+...+- =|- T Consensus 181 V~--~~~lt~t~~~al~~~~~N~y~~~~~-~-~~~~~G~~~~G-----~~iD~~~~~dWl~~~lq~~l~~ll~~~~kiPy 251 (331) T protein:vir:80 181 IT--SEELKVSEIDAIQKAGGMCYIEKAG-I-AQTSEGKTVSG-----EFIDSIHGDDWIKATIETRLQKLLTETDKLTF 251 (331) T ss_pred CC--CCCCCHHHHHHHHhcCceEEEEecC-e-eEEecceEeCc-----hhHHHHHHHHHHHHHHHHHHHHHHHhCCCCcc Confidence 22 2457899999999999999988754 3 34677778775 3789999999999999999887654 234 Q ss_pred CHHHHHHHHHHHHHHHHHHHhcCceE--------EEEEEEc-cCCCCHHHhhCCEEE-EEEEEEecCcceEEEEEEEEee Q lcl|Aclame:pro 579 DAFTRQSFRMETSQYLDGIRSLGGCY--------DFRVVCD-TTNNTPNVIDRNEFV-GTIYVKPPRSINYITLNMVATS 648 (663) Q Consensus 579 ~~~~~~~v~~~i~~~L~~l~~~gal~--------g~~v~~d-~~~nt~~~i~~G~~~-~~i~~~p~~p~e~i~~~~~~~~ 648 (663) |+.=...|+..|+.-|++.+++|.|. ||.|.+. .++.+++|+.++++. +.+.+++...+++|.|++..+= T Consensus 252 ~~~G~~~l~a~i~~~~~~av~~G~I~~g~~~~~~~~~v~~~~~~~~s~~dr~~R~~~~~~~~~~~~gaI~~v~i~~~v~~ 331 (331) T protein:vir:80 252 DARGIALLQSELTTVLNEGFANGIIDSNDETGEPNFSITALQRSDLNDDDIAKRNYKGLSFRYKRSGAIHSVDVYGEVEV 331 (331) T ss_pred ChhhHHHHHHHHHHHHHHHHhCCceecCccCCCcceEEEeCchhcCCHHHHhccCCCCeEEEEEEcceEEEEEEEEEEeC Confidence 66667889999999999999999996 6999988 677899999999885 8899999999999999877653 No 60 >protein:vir:5260 Length: 502 # NCBI annotation: hypothetical protein # Family: family:all:396 # MgeID: mge:117 # MgeName: Aaphi23 # Cross-refs: genbank:acc:NP_852765;genbank:gi:31544040;uniprot:Q7Y5T5;genbank:GeneID:2753559 Probab=97.98 E-value=8.3e-06 Score=48.43 Aligned_cols=462 Identities=11% Similarity=0.017 Sum_probs=212.6 Q ss_pred Cce-ecCceEEEEecCCCcccccCCCceEEEeec-ccCCCC---cceEeCCHHHHHHHcCCcCCCchhHHHHHHHHhcC- Q lcl|Aclame:pro 1 MAL-LSPGIEMKETSINSTVVRSATGRAAIVGKF-AWGPAY---EVRQVTNEVELVDMFGSPDNVTAPYFMSAMNFLQY- 74 (663) Q Consensus 1 ~~~-~~PGVyveEv~~~~~i~~v~Ts~~afvG~~-~~Gpv~---~p~~i~s~~e~~~~FG~~~~~~~~~~~~~~~F~nG- 74 (663) |.+ ++.=|.|..-..+..+.+..=+...|+|.. ..-|.. .-..-+|..|-...|| ..+.++.+++.+|-+- T Consensus 1 msip~s~ivnV~i~~~~~a~~~~~f~~~l~l~~~~~~~~~~~~~r~~~~~s~~~V~~~FG---~~s~ey~aA~~yF~q~p 77 (502) T protein:vir:52 1 MALSISHIVNVQLNTVPKSAARKSFGIVALFTPEAGQAFADEKTRYVYVENQRDVEQLFG---TNSETAKAAQPFFAQSP 77 (502) T ss_pred CCCCccceeEEeeccccccccccccCceEEEeeccCccccCCccceEEecCHHHHHHhcC---CChHHHHHHHHHhcCCC Confidence 887 555555543223333444555677888873 344433 3334488999999999 5678888888899531 Q ss_pred -CceEEEEEeccccccccccccccceeeeeccccccccccccccccccccccccceeeeeeecccceeeeeecccchhcc Q lcl|Aclame:pro 75 -GNDLRLVRVIDMEKAKNASPLVNQVSVTITTEGQGYTVGDAITVKYNNATITEAGKVTAVDSDGKIKSLFVPTAEIIAK 153 (663) Q Consensus 75 -G~~~~vvRv~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~v~~~~~~g~~~~~~~~~~~~~~~ 153 (663) =+++||-|-........ ...+.+......... -..... ....+.++.....-....+.......... T Consensus 78 ~P~~l~igR~~~~~~~~~--~~~~~~~~~~~~~~~-------~~~~~~---~~G~l~i~i~g~~~t~~~i~lS~~ts~~~ 145 (502) T protein:vir:52 78 RAKQLIVARWQKSASTIE--ATKNTLSGATLSDDL-------ERFKSV---VNGRFSLTIGGDVKKVDGLSFARLADFNA 145 (502) T ss_pred ccceEEEEecccccccee--echhhhhhhhhHHhH-------HHhhhh---cCceeEEEecceeeeeeccccccccchhH Confidence 12677777543221110 000111000000000 000000 00001111000000000000000000000 Q ss_pred c-ccccccc-cceeceeeeecccccceeeeeecccccccccccccccccccccccccccccccccccccceeeecchhhc Q lcl|Aclame:pro 154 T-RQLGTYP-TLGDNWRIDVSGASGGSAAALALGNIVVDSGVTFGNSEDAPAVMTSPAVMEKYAKFGMPLISAVYPGEIG 231 (663) Q Consensus 154 ~-~~~~t~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~g~~g 231 (663) . ....... ............. .... ..++.+ .+ ...+ T Consensus 146 vA~~i~~~l~~~~~~~tv~~d~~---------------~~~F----------~i~s~t-------tg--~~~~------- 184 (502) T protein:vir:52 146 VATKIQEKLTTLSVAVSIAYDET---------------GNRF----------IVSANV-------AG--EDKK------- 184 (502) T ss_pred HHHHHHhhhcccccceEEEEecC---------------CceE----------EEEecc-------CC--Ccce------- Confidence 0 0000000 0000000000000 0000 000000 00 0000 Q ss_pred ccccccc-ccccccccccccceecccceecccceeEEEecccccccceeeeccCCcceeeEeeeecccccccccchhhhh Q lcl|Aclame:pro 232 STVEVEI-VSKTAFNSGAQQTIYPFGGTRTSNARGVIQYGPMTDDQFAIIVRRDGIVVESTVLSTRKGDRDVYGSNIFMD 310 (663) Q Consensus 232 ~~v~v~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (663) +.+.. ..+.. .+.. +. T Consensus 185 --~~~~~a~~~~~----------------------------------------~gt~---------------------~a 201 (502) T protein:vir:52 185 --TEIDYAIDEGG----------------------------------------EGEY---------------------IG 201 (502) T ss_pred --eEEEEeecCCc----------------------------------------chhH---------------------HH Confidence 00000 00000 0000 00 Q ss_pred hhhcC-CCceEEEEeecccCCccceeEEecCcccccccccchhhhHHHHHhhhhccccceeEEeeccCcCChhHHHHHHH Q lcl|Aclame:pro 311 DYFRN-GGSNFIFASSEGWPAGFTGIIQLGGGTSANADVGADELIKGWDLFSDREALHVNLMIAGACGSDGAEIASTVQK 389 (663) Q Consensus 311 ~~~~~-~~s~~v~~~~~~~~~~~~~~~~l~gg~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 389 (663) +.+.. .....+. ......+ ....+...++..+.+... +--.+++.. .. +.++ .. T Consensus 202 ~~l~l~~~~~av~------------v~~~~~g------~~aet~~~al~a~~~~~~-~w~~~~~a~-~~-~~~~----~l 256 (502) T protein:vir:52 202 ALLKLENGQASRK------------VGKNSVS------LKKETLGEALFNVAEVNN-TWYGFTVAA-QL-TDSE----VE 256 (502) T ss_pred HHhccccccceee------------eeeeccc------ccccCHHHHHHHHHhccC-ceEEEEEee-cC-ChhH----HH Confidence 00000 0000000 0000000 011222333333333221 111111111 11 1112 23 Q ss_pred HHHHHHHhhCCeEEEecccccccccccccccHHHHHHHHhhcccccchhhhccCcCcceEE-EecCceeecccccCceeE Q lcl|Aclame:pro 390 YVVSLADDRQDCVAIVNPPAELMVGIPTSTAVKNIVEWRNGMTGSGEVVDNNMNISSTYAF-IIGNYKYQYDKYNDINRW 468 (663) Q Consensus 390 ~~~~~~~~~~~~~~i~d~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~-~~~p~~~~~d~~~~~~~~ 468 (663) ++..++|....+|.+....... . .. ...++..-... ....+.. +|++ .+ T Consensus 257 a~a~~iea~~~~f~~~~~d~~~-~-~~---~~~~i~~~l~a-------------~~~~~t~~~y~~-------~~----- 306 (502) T protein:vir:52 257 AAAKYAQANTKLFGANVIRAEQ-I-EW---SADNIYKKLYD-------------AGLDHTLAMFDK-------ND----- 306 (502) T ss_pred HHHHHHhhcCcEEEEEecCcce-e-cc---ccchHHHHHHh-------------ccCceeEEEecC-------Cc----- Confidence 5566666655566543211110 0 00 01111111000 0112222 3322 11 Q ss_pred echHHHHHHHHHhhhhccC-ceecccceecceeecceeeeeecChhhhhhhhhCCceEEEEeeCCCcEEEEcceecCCCC Q lcl|Aclame:pro 469 VPLAADIAGLCAYTDQVSH-PWMSPAGYRRGQIRNCIKLAIEPKQSMRDTMYQVAINPVTGFAGGDGFVLFGDKMATQVP 547 (663) Q Consensus 469 ~p~s~~~AG~~a~~d~~~g-~~~span~~~~~i~~~~~~~~~~~~~~~~~Ln~~~in~i~~~~~~~G~~~wG~rT~~~~~ 547 (663) -.+.+.+.|.++.+|-.+- -...-.+|.+.||. ...++..|.+.|..+++|++..+.+ .+ .+...+++++ T Consensus 307 ~~~~aa~~g~~as~~f~~~~g~iT~~fk~l~GV~-----~~~lt~t~~~al~~~~~N~y~~~~~-~~-~~~~G~~~~G-- 377 (502) T protein:vir:52 307 MYPVSSALARLLSTNFAANNSTLTLKFKQQPTIT-----ADEITATEFAKAKRLGINVYTYFDD-VA-MIAEGTVIGG-- 377 (502) T ss_pred chhHHHHHHHHHhcCCCcCcceeeecccccCCcc-----cCcCCHHHHHHHHhcCceEEEEecC-ee-EEecCeeeCC-- Confidence 1355667788888874332 11223355544442 3457899999999999999988754 44 4677788776 Q ss_pred ccceeeehhhHHHHHHHHHHHHHHHhhcc-----cCCHHHHHHHHHHHHHHHHHHHhcCceE------------------ Q lcl|Aclame:pro 548 SPFDRINVRRLFNMLKKNIGDTSKYELFE-----NNDAFTRQSFRMETSQYLDGIRSLGGCY------------------ 604 (663) Q Consensus 548 ~~~~~i~vrR~~~~i~~~~~~~~~~~v~e-----pn~~~~~~~v~~~i~~~L~~l~~~gal~------------------ 604 (663) +||-+.+-.+|++..|++.+...++. |-|+.=...|+..|+.-|++-+++|.|. T Consensus 378 ---~~iD~~~~~~Wl~~~lq~~l~~~L~~s~~kIPy~~~G~~~l~a~i~~~l~~a~~~G~I~~G~~~~~~~g~~~~~d~~ 454 (502) T protein:vir:52 378 ---KFADEIVILDWFVDAVQKEVFARLYKSPTKIPLTDKGQAILIAAVEKVCLEGINNGAFAPGKWTGAGFGNLSTGDYL 454 (502) T ss_pred ---chhhHHHHHHHHHHHHHHHHHHHHHhcCCCcccChhHHHHHHHHHHHHHHHHHhcCccccccccCcccceeeecccc Confidence 36778899999999999998776652 4577778899999999999999999994 Q ss_pred --EEEEEEc-cCCCCHHHhhCCEE-EEEEEEEecCcceEEEEEEEEee Q lcl|Aclame:pro 605 --DFRVVCD-TTNNTPNVIDRNEF-VGTIYVKPPRSINYITLNMVATS 648 (663) Q Consensus 605 --g~~v~~d-~~~nt~~~i~~G~~-~~~i~~~p~~p~e~i~~~~~~~~ 648 (663) ||.|.+. .++.++.|+.++++ -+.+.+++...+++|.|.+...+ T Consensus 455 ~~gy~v~~~~~~~~s~~dr~~R~~~~~~~~~~~aGaIh~v~i~~nv~~ 502 (502) T protein:vir:52 455 DKGFYVWAAPMDTLSDSDRQARRATPIQTAVKLAGAIHSSDVIVNYNR 502 (502) T ss_pred cCceEEEeCchhhCCHHHHHcccCCCeEEEEEECceEEEEEEEEEEeC Confidence 6899988 67889999999998 89999999999999999988777 No 61 >protein:vir:3165 Length: 426 # NCBI annotation: capsid protein CP67 # Family: family:all:28419 # MgeID: mge:316 # MgeName: PhiCh1 # Cross-refs: genbank:acc:NP_665936;genbank:gi:22091122;genbank:GeneID:951267 Probab=94.74 E-value=0.0036 Score=33.97 Aligned_cols=340 Identities=11% Similarity=0.026 Sum_probs=143.4 Q ss_pred cccccceeeec--cCCcceeeEeeeeccccccc------------ccchhhhhhhhcCCCceEEEEe---eccc-----C Q lcl|Aclame:pro 272 MTDDQFAIIVR--RDGIVVESTVLSTRKGDRDV------------YGSNIFMDDYFRNGGSNFIFAS---SEGW-----P 329 (663) Q Consensus 272 ~~~~~~~~~~~--~~g~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~s~~v~~~---~~~~-----~ 329 (663) ++.+...+.+. ......+.|.....-+.... +.....+.+-+......+..+. .... . T Consensus 1 m~~~iVnV~Is~~t~A~~~~~Fg~~liigs~~~~~p~~~f~~~~~Yss~~~V~~Dfg~~s~~Y~AA~~~f~Q~~~~~r~~ 80 (426) T protein:vir:31 1 MPKQIVEIELTAEIADRPQETFTDAAIVGTAEEEPPDAEFGEVNQYSTSTSVGDDYGEDSDVYTASEAIEEMGAEQWRVM 80 (426) T ss_pred CCcceEEEEeecccccccccccceeeeeeeccccccccccchhhhhhhHHHHHhcCCCChHHHHHHHHHHhCCceeEEee Confidence 33333222222 22333343432111111110 1111111111111111110000 0000 0 Q ss_pred CccceeEEecCcccc-----c-------ccccchhhhHHHHHhhhhccccceeEEeeccCcC-----------ChhHHHH Q lcl|Aclame:pro 330 AGFTGIIQLGGGTSA-----N-------ADVGADELIKGWDLFSDREALHVNLMIAGACGSD-----------GAEIAST 386 (663) Q Consensus 330 ~~~~~~~~l~gg~d~-----~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~ 386 (663) ........-.+..++ . ......+...++..-...........+....+.. ...++.. T Consensus 81 v~~at~~~~~~~t~~~tv~g~~~s~~a~~~~~a~~i~~~~~~~~~~~~~~~~~~~~t~~g~~t~~~~~~~~~~s~~dw~~ 160 (426) T protein:vir:31 81 VLEATEVTEEELSDGDTIDKVPILGNHEVESPDGDIEFTTDDDPDVEDFDAEIVINSATGDVATSEDSIELTYFHADWSQ 160 (426) T ss_pred ccccceeeeccCCcceeecceeeeecccCcchHHHHHHhhccccccccceeeeEeccccceeeccccceeeeeccCcchh Confidence 000000000000000 0 0001111111111111111111111110000000 0000000 Q ss_pred HH-----HHHHHHHHhhCCeEEEecccccccccccccccHHHHHHHHhhcccccchhhhccCcCcceEEEecCceeec-- Q lcl|Aclame:pro 387 VQ-----KYVVSLADDRQDCVAIVNPPAELMVGIPTSTAVKNIVEWRNGMTGSGEVVDNNMNISSTYAFIIGNYKYQY-- 459 (663) Q Consensus 387 ~~-----~~~~~~~~~~~~~~~i~d~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~p~~~~~-- 459 (663) +. ..+..+++...+..++. ..++..+|... .+...+.++.... T Consensus 161 ~~~~~s~~~~~~ia~~~~~~~~~~--------------~~~~~~~wa~~----------------~~i~~va~~~e~~~~ 210 (426) T protein:vir:31 161 LDEFPSDVNNFAVADRRFDLKGVG--------------VLDETHSWASD----------------EDMGMIANGVNVDDY 210 (426) T ss_pred hhcccccchhhhhhccccchhhhh--------------hhHhhhhhhhh----------------cceeeeeeccchhhh Confidence 00 00000111111100000 01112222211 1111122221100 Q ss_pred cc----------ccC----------ceeEe-chHHHHHHHHHhhhhccCceecccceecceeecc------eeeeeecCh Q lcl|Aclame:pro 460 DK----------YND----------INRWV-PLAADIAGLCAYTDQVSHPWMSPAGYRRGQIRNC------IKLAIEPKQ 512 (663) Q Consensus 460 d~----------~~~----------~~~~~-p~s~~~AG~~a~~d~~~g~~~span~~~~~i~~~------~~~~~~~~~ 512 (663) +. ..+ ....- -..++++|.++.++ ||..|.-+...+-..+ .++...+.. T Consensus 211 ~~~~~~~a~~~~~~~y~p~~~~~~~~~~~~~~~~~~~~~~~aa~~----~~~~~~~~~~~~~~~~~~~~~~~gv~~t~~~ 286 (426) T protein:vir:31 211 DSVDEAMDVAHEVAGYVPSGDLMMIVDASDDDLAAYQLGKFAVSE----PWYNPLWNELPAGETVSKNVGDPEEQGTFEG 286 (426) T ss_pred cchhhhhhhhhcccccccchhheeehhccccchhhHHhhhhhhhc----cccchhhhhccccccceeeccccccccccch Confidence 00 000 00000 11356777777665 5666542222111111 112222233 Q ss_pred hhhhhhhhCCceEEEEeeCCCcEEEEcceecCCCCccceeeehhhHHHHHHHHHHHHHHHhhc---c-cCCHHHHHHHHH Q lcl|Aclame:pro 513 SMRDTMYQVAINPVTGFAGGDGFVLFGDKMATQVPSPFDRINVRRLFNMLKKNIGDTSKYELF---E-NNDAFTRQSFRM 588 (663) Q Consensus 513 ~~~~~Ln~~~in~i~~~~~~~G~~~wG~rT~~~~~~~~~~i~vrR~~~~i~~~~~~~~~~~v~---e-pn~~~~~~~v~~ 588 (663) .++..++ +..|.++.+.+ +..+|-.-|..+......||=++|..+||+..++..++..+- + |-++.-...|+. T Consensus 287 ~~~A~~~-~~~n~~~~~~~--~~~i~~~~~~~G~~~~G~~iD~~~g~dwl~~~iq~~l~~ll~~~~KIpyt~~Gi~~I~~ 363 (426) T protein:vir:31 287 GDEAEGE-GPVNVLIDVSD--ANRVSNAVTTAGADSDTSFFDIRRTKVYTAEMLELDLESLQVSDDDVPFTEDGQAMIED 363 (426) T ss_pred hhhhhhc-CCceEEEEecC--ceeeecceeecccccchhhhhhHHHHHHHHHHHHHHHHHHhhcCCCCccchhHHHHHHH Confidence 3444555 66798988764 566776667766666788999999999999999999987653 2 678888889999 Q ss_pred HHHHHHHHHHhcCc--eEEEEEEEccCCCCHHHhhCCEEE-EEEEEEecCcceEEEEEEEEee Q lcl|Aclame:pro 589 ETSQYLDGIRSLGG--CYDFRVVCDTTNNTPNVIDRNEFV-GTIYVKPPRSINYITLNMVATS 648 (663) Q Consensus 589 ~i~~~L~~l~~~ga--l~g~~v~~d~~~nt~~~i~~G~~~-~~i~~~p~~p~e~i~~~~~~~~ 648 (663) .|+.-|++.++.|. +.+|.|.......++.|..+.++. +++..+..-.++++.|+...+= T Consensus 364 ~i~~~L~~~v~~~g~~~~~y~v~~P~~~~~~~dra~R~~~~i~~~~~laGAIh~v~I~g~v~v 426 (426) T protein:vir:31 364 AIKGTMSGLTGSVGQPLAEYEVDVPEWDDDDVDRVNRNWGGIDLDARLAQRAHTFSLGLNVSV 426 (426) T ss_pred HHHHHHHHHhcCCCccccceeecCCCccccchhhhhhccCCceEEEEEeCcEEEEEEEEEEeC Confidence 99999999998654 557999887555566788887775 8999999999999999877653 No 62 >protein:vir:106730 Length: 501 # NCBI annotation: gp04 # Family: family:all:396 # MgeID: mge:1599 # MgeName: Bcep1 # Cross-refs: genbank:acc:NP_944312;genbank:gi:38638611;genbank:GeneID:2657359 Probab=86.20 E-value=0.047 Score=27.85 Aligned_cols=449 Identities=10% Similarity=0.026 Sum_probs=196.7 Q ss_pred Cce--ecCceEEEEecCCCcccccCCC-ceEEEeecccCCCCcceEeCCHHHHHHHcCCcCCCchhHHHHHHHHh---c- Q lcl|Aclame:pro 1 MAL--LSPGIEMKETSINSTVVRSATG-RAAIVGKFAWGPAYEVRQVTNEVELVDMFGSPDNVTAPYFMSAMNFL---Q- 73 (663) Q Consensus 1 ~~~--~~PGVyveEv~~~~~i~~v~Ts-~~afvG~~~~Gpv~~p~~i~s~~e~~~~FG~~~~~~~~~~~~~~~F~---n- 73 (663) |.+ +.=--||+-.+.-..-.++.-+ ..-+++....=|+++....+|..|-...|| ..+.++.+++.||- | T Consensus 1 m~~~~ip~s~iV~V~~~v~~~~~~~~~f~~lll~~~~~~~~~r~~~y~s~~~V~~~FG---~~S~ey~aA~~yFsg~~~q 77 (501) T protein:vir:10 1 MPTTTIPIDQIVQMLPGVIGAGGAPGRLTGLVLTQDTSVQPGQLADFFQKTDVENWFG---ALSNEAKIADAYFPGIVNG 77 (501) T ss_pred CCcCccccceEEEEeeecccCCCcccccceEEEecccCCCccceeeecCHHHHHHhcC---CChHHHHHHHHHhhhhcCC Confidence 887 3335566644432222222222 233455555568888888899999999999 57778888888885 2 Q ss_pred --CCceEEEEEeccccccccccccccceeeeeccccccccccccccccccccccccceeeeeeecccceeeeeecccchh Q lcl|Aclame:pro 74 --YGNDLRLVRVIDMEKAKNASPLVNQVSVTITTEGQGYTVGDAITVKYNNATITEAGKVTAVDSDGKIKSLFVPTAEII 151 (663) Q Consensus 74 --GG~~~~vvRv~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~v~~~~~~g~~~~~~~~~~~~~ 151 (663) ==+++||-|-...... +...++.+. ..+ .. .... ....+.+... +......++....... T Consensus 78 ~p~P~~l~igR~~~~~~~--~~l~g~~l~--~~~------la---~~~~----~~g~l~i~i~-g~~~~~~i~~s~ats~ 139 (501) T protein:vir:10 78 GQLPYDLKFARYVAADAP--ASVYGIPLT--GIT------LA---QLQG----YSGTLTVTTA-AQHVSANISLAAATSF 139 (501) T ss_pred CccccEEEEEeecccCcc--ceeeeceeh--hhh------hh---hhhh----eeeEEEEeec-cceeeeccccccccCH Confidence 2348999996543211 000011110 000 00 0000 0011111110 0000000000000000 Q ss_pred c-ccccccccccceeceeeeecccccceeeeeecccccccccccccccccccccccccccccccccccccceeeecchhh Q lcl|Aclame:pro 152 A-KTRQLGTYPTLGDNWRIDVSGASGGSAAALALGNIVVDSGVTFGNSEDAPAVMTSPAVMEKYAKFGMPLISAVYPGEI 230 (663) Q Consensus 152 ~-~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~g~~ 230 (663) . .+....+. +.. ....+.-..+.... .+++.+ .+ T Consensus 140 ~~vA~~i~~a--l~~--------------~~~tv~~d~~~~~f----------~i~~~t---~G---------------- 174 (501) T protein:vir:10 140 ANAATLIEAA--FTS--------------PDFVVAYDALRNRF----------TVVTNT---TG---------------- 174 (501) T ss_pred HHHHHHHHHh--hcC--------------CceEEEEecccceE----------EEEecc---cC---------------- Confidence 0 00000000 000 00000000000000 000000 00 Q ss_pred ccccccccccccccccccccceecccceecccceeEEEecccccccceeeeccCCcceeeEeeeecccccccccchhhhh Q lcl|Aclame:pro 231 GSTVEVEIVSKTAFNSGAQQTIYPFGGTRTSNARGVIQYGPMTDDQFAIIVRRDGIVVESTVLSTRKGDRDVYGSNIFMD 310 (663) Q Consensus 231 g~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (663) ....+...... .. ..... .+. .+ T Consensus 175 -~~~~i~~~t~~-~d-~a~~l--------------------------~Lt---~~------------------------- 197 (501) T protein:vir:10 175 -TAAAISAVTGT-NN-LADEL--------------------------GLS---AA------------------------- 197 (501) T ss_pred -cceeEEEeecc-cc-chhhh--------------------------ccc---cc------------------------- Confidence 00000000000 00 00000 000 00 Q ss_pred hhhcCCCceEEEEeecccCCccceeEEecCcccccccccchhhhHHHHHhhhhccccceeEEeeccCcCChhHHHHHHHH Q lcl|Aclame:pro 311 DYFRNGGSNFIFASSEGWPAGFTGIIQLGGGTSANADVGADELIKGWDLFSDREALHVNLMIAGACGSDGAEIASTVQKY 390 (663) Q Consensus 311 ~~~~~~~s~~v~~~~~~~~~~~~~~~~l~gg~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 390 (663) .+ ..+ ...|. ..++...++..+.+...--..+..+.. ...++ ..+ T Consensus 198 -----~~-a~v---------------~~~g~-------~aet~~~Al~a~~~~~~~Wy~f~~a~~---~~~~~----~la 242 (501) T protein:vir:10 198 -----AG-ATL---------------QAAGV-------AADTPASAMNRAVGLSRNWATFTTAWT---AVIAD----RLA 242 (501) T ss_pred -----Cc-eeE---------------EecCc-------ccccHHHHHHHHHhcccceEEEEEEec---CChHH----HHH Confidence 00 000 00000 000111222222222110001111111 11112 234 Q ss_pred HHHHHHhhCCeEEE--ecccccccccccccccHHHHHHHHhhcccccchhhhccCcCcceEEEecCceeecccccCceeE Q lcl|Aclame:pro 391 VVSLADDRQDCVAI--VNPPAELMVGIPTSTAVKNIVEWRNGMTGSGEVVDNNMNISSTYAFIIGNYKYQYDKYNDINRW 468 (663) Q Consensus 391 ~~~~~~~~~~~~~i--~d~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~p~~~~~d~~~~~~~~ 468 (663) +..++|....+|.+ -|....... .....++...... . +..+...+|+. T Consensus 243 ~A~wi~a~~~~f~~~~~~~~~~~~~----~~~~~~i~~~l~~-----------~--~y~~t~~~y~~------------- 292 (501) T protein:vir:10 243 FAAWNSGQAYKYMYVAPDLEAASIV----TNNAASFGAQVFA-----------A--PYQGTLPLYGD------------- 292 (501) T ss_pred HHHHHHhcCceEEEEEecCcceeee----cccchhHHHHHHh-----------c--CCCceEEECCC------------- Confidence 55566654444332 222111000 0010111111100 1 12234443321 Q ss_pred echHHHHHHHHHhhhhcc--C--ceecccceec-ceeecceeeeeecChhhhhhhhhCCceEEEEeeC-CCcEEEEccee Q lcl|Aclame:pro 469 VPLAADIAGLCAYTDQVS--H--PWMSPAGYRR-GQIRNCIKLAIEPKQSMRDTMYQVAINPVTGFAG-GDGFVLFGDKM 542 (663) Q Consensus 469 ~p~s~~~AG~~a~~d~~~--g--~~~span~~~-~~i~~~~~~~~~~~~~~~~~Ln~~~in~i~~~~~-~~G~~~wG~rT 542 (663) ..|.+.+.|..+.+|-++ | -|+ .|.+ .++ ....++..|.+.|..+|+|++..|.+ ...+.+|-.-+ T Consensus 293 ~~~~aa~~g~~as~nf~~~~g~~T~~---fkql~~Gv-----~a~~l~~t~a~al~~~~~N~y~~~~~~~~~~~~~~~G~ 364 (501) T protein:vir:10 293 QATAGAVMGYAASINFQLRNGRTVLA---FRQFNAGV-----PATAHDLPTANALRSNNYTYIGAYANAANNYTIAYDGK 364 (501) T ss_pred CCHHHHHHHHHHhcCcccCcceeeee---ecccCCCc-----CcccCCHHHHHHHHhcCCeEEEEEecccceeeEEEcce Confidence 245677888888887543 2 222 3322 122 22457889999999999999988864 23477885555 Q ss_pred cCCCCccceeeehhhHHHHHHHHHHHHHHHhhcc----cCCHHHHHHHHHHHHHHHHHHHhcCceE-------------- Q lcl|Aclame:pro 543 ATQVPSPFDRINVRRLFNMLKKNIGDTSKYELFE----NNDAFTRQSFRMETSQYLDGIRSLGGCY-------------- 604 (663) Q Consensus 543 ~~~~~~~~~~i~vrR~~~~i~~~~~~~~~~~v~e----pn~~~~~~~v~~~i~~~L~~l~~~gal~-------------- 604 (663) +++ +|.+|.+-+-.+|++..|+..+....-. |-|+.=...|+..|+.-|++-+++|.|. T Consensus 365 ~sG---~~~wiD~~~g~dWl~~~iq~~l~~ll~~~~kIPyt~~G~~~l~a~i~~~l~~av~nG~Ia~Gv~l~~~q~~~i~ 441 (501) T protein:vir:10 365 LSG---KFLWVDTYLDQIYLNAELQRAEFEAMLAYNSLPYNEDGYTANYRAGVDVIDAAVTSGIIRAGVTLTNSQLQQID 441 (501) T ss_pred eec---cceehhhHhhHHHHHHHHHHHHHHHHhcCCCcccCHHHHHHHHHHHHHHHHHHHhCcceecCcccCcccceeec Confidence 665 4778899999999999999998775432 4467778889999999999999999882 Q ss_pred ---------------EEEEEEccCCCC-HHHhhCCEEEEEEEEEecCcceEEEEEEEEeecccchhhhh Q lcl|Aclame:pro 605 ---------------DFRVVCDTTNNT-PNVIDRNEFVGTIYVKPPRSINYITLNMVATSTGANFDELI 657 (663) Q Consensus 605 ---------------g~~v~~d~~~nt-~~~i~~G~~~~~i~~~p~~p~e~i~~~~~~~~~~~~~~e~~ 657 (663) ||.+.++....+ +....+.-..+.+.++---.+++|.+-.. ||| T Consensus 442 ~~~g~~~~~~~v~~~Gyy~~~~~~~~~~~~R~~R~~p~~~~~y~~~gaIh~v~i~s~---------~v~ 501 (501) T protein:vir:10 442 AVAGVAGAGALVQTRGWYFLIGNPANPGQARQNRTSPACTLWYSDGGSIQELTIGSN---------AVI 501 (501) T ss_pred ccccccccccceeccceEEeeCcccCChhhhhhcccCceEEEEEeCCceeEEEeeee---------ecC Confidence 377778744333 44444455577777777888888876432 333 No 63 >protein:vir:101576 Length: 501 # NCBI annotation: gp04 # Family: family:all:396 # MgeID: mge:1477 # MgeName: Bcep43 # Cross-refs: genbank:acc:NP_958108;genbank:gi:41057654;genbank:GeneID:2716834 Probab=84.37 E-value=0.061 Score=27.24 Aligned_cols=451 Identities=10% Similarity=0.037 Sum_probs=194.9 Q ss_pred Cce--ecCceEEEEecCCCcccccCCC-ceEEEeecccCCCCcceEeCCHHHHHHHcCCcCCCchhHHHHHHHHh---c- Q lcl|Aclame:pro 1 MAL--LSPGIEMKETSINSTVVRSATG-RAAIVGKFAWGPAYEVRQVTNEVELVDMFGSPDNVTAPYFMSAMNFL---Q- 73 (663) Q Consensus 1 ~~~--~~PGVyveEv~~~~~i~~v~Ts-~~afvG~~~~Gpv~~p~~i~s~~e~~~~FG~~~~~~~~~~~~~~~F~---n- 73 (663) |-+ +.=--||+-.+.-..-.++.-+ ..-|++....=|+++..+.+|..|-...|| ..+.++.+++.+|- | T Consensus 1 m~~~~ip~s~iV~V~~~v~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~s~~~V~~~FG---~~S~ey~aA~~yFsg~~~q 77 (501) T protein:vir:10 1 MPTTTIPIDQIVQMLPGVIGAGGAPGRLTGLVLTQDTSVQPGQLADFFQETDVENWFG---ALSNEAKIADAYFPGIVNG 77 (501) T ss_pred CCCCCcccceEEEEeeecccCCCccccceeEEEeccCCCCccceEEecCHHHHHHhcC---CChHHHHHHHHHhhhhcCC Confidence 776 3335566644432222222222 234555566678899999999999999999 57778888888886 2 Q ss_pred --CCceEEEEEeccccccccccccccceeeeeccccccccccccccccccccccccceeeeeeecccceeeeeecccchh Q lcl|Aclame:pro 74 --YGNDLRLVRVIDMEKAKNASPLVNQVSVTITTEGQGYTVGDAITVKYNNATITEAGKVTAVDSDGKIKSLFVPTAEII 151 (663) Q Consensus 74 --GG~~~~vvRv~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~v~~~~~~g~~~~~~~~~~~~~ 151 (663) ==+++||-|-..... +..+.+... ... +..+ ... ....+.+... +......++....... T Consensus 78 ~p~P~~l~igR~~~~~~---~~~l~g~~l-~~~------~la~---~~~----~sg~l~vti~-g~~~~~~i~ls~ats~ 139 (501) T protein:vir:10 78 GQLPYDLKFARYVAADA---PASVYGIPL-TGV------TLAQ---LQG----YSGTLTVTTA-AQHVSANISLAAATSF 139 (501) T ss_pred CccccEEEEEeecCCCc---cceEeccch-hhh------hhhh---cce----eeeEEEEeec-cceeecccccccccCH Confidence 134899999654211 111101000 000 0000 000 0011111110 0000000000000000 Q ss_pred c-ccccccccccceeceeeeecccccceeeeeecccccccccccccccccccccccccccccccccccccceeeecch-h Q lcl|Aclame:pro 152 A-KTRQLGTYPTLGDNWRIDVSGASGGSAAALALGNIVVDSGVTFGNSEDAPAVMTSPAVMEKYAKFGMPLISAVYPG-E 229 (663) Q Consensus 152 ~-~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~g-~ 229 (663) . .+....... . ... ..+.-....... ..++.+. + ....+.....+ . T Consensus 140 ~~vAs~i~~al----------~----~~~--~tv~~d~~~~~f----------~its~tt---G---~~~~i~~~~~~~~ 187 (501) T protein:vir:10 140 ANAATLIEAAF----------T----SPD--FVVAYDALRNRF----------TVVTNAT---G---TAAAISAVTGTNN 187 (501) T ss_pred HHHHHHHhhhc----------c----CCc--eEEEEcccCceE----------EEEeecc---C---CceeEEEeeCchh Confidence 0 000000000 0 000 000000000000 0000000 0 00000000000 0 Q ss_pred hccccccccccccccccccccceecccceecccceeEEEecccccccceeeeccCCcceeeEeeeecccccccccchhhh Q lcl|Aclame:pro 230 IGSTVEVEIVSKTAFNSGAQQTIYPFGGTRTSNARGVIQYGPMTDDQFAIIVRRDGIVVESTVLSTRKGDRDVYGSNIFM 309 (663) Q Consensus 230 ~g~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 309 (663) .+..+.++ . + T Consensus 188 la~~l~Lt---------------------------------------------~-~------------------------ 197 (501) T protein:vir:10 188 LADELGLS---------------------------------------------A-A------------------------ 197 (501) T ss_pred hhhhcCcc---------------------------------------------c-c------------------------ Confidence 00000000 0 0 Q ss_pred hhhhcCCCceEEEEeecccCCccceeEEecCcccccccccchhhhHHHHHhhhhccccceeEEeeccCcCChhHHHHHHH Q lcl|Aclame:pro 310 DDYFRNGGSNFIFASSEGWPAGFTGIIQLGGGTSANADVGADELIKGWDLFSDREALHVNLMIAGACGSDGAEIASTVQK 389 (663) Q Consensus 310 ~~~~~~~~s~~v~~~~~~~~~~~~~~~~l~gg~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 389 (663) .+. .+ ...|. ..++...++..+.+...--..+..+.. ...++ .. T Consensus 198 ------~~a-~v---------------~~~g~-------~aet~~~a~~a~~~~~~~Wy~f~~a~~---~~~~~----~l 241 (501) T protein:vir:10 198 ------AGA-TL---------------QAAGV-------AADTPASAMNRAVGLSRNWATFTTAWT---AVIAD----RL 241 (501) T ss_pred ------ccc-eE---------------EecCc-------ccccHHHHHHHHHhccCceEEEEEecC---CChHH----HH Confidence 000 00 00000 000111222222211110000111111 11111 23 Q ss_pred HHHHHHHhhCCeEEEe--cccccccccccccccHHHHHHHHhhcccccchhhhccCcCcceEEEecCceeecccccCcee Q lcl|Aclame:pro 390 YVVSLADDRQDCVAIV--NPPAELMVGIPTSTAVKNIVEWRNGMTGSGEVVDNNMNISSTYAFIIGNYKYQYDKYNDINR 467 (663) Q Consensus 390 ~~~~~~~~~~~~~~i~--d~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~p~~~~~d~~~~~~~ 467 (663) ++..++|....+|.+. |...... ......++...... -...+...+|+. T Consensus 242 a~A~wiea~~~~f~~~~~~~~~~~~----~~~~~~~i~~~l~~-------------~~y~~t~~~y~~------------ 292 (501) T protein:vir:10 242 AFAAWNSGQAYKYMYVAPDLEAASI----VTNNAASFGAQVFA-------------APYQGTLPLYGD------------ 292 (501) T ss_pred HHHHHHHhcCceEEEEEecCchhhh----hhhhhhhHHHHHHh-------------cCCCceEEECCC------------ Confidence 4555666544443322 2111000 00000111111100 112334444431 Q ss_pred EechHHHHHHHHHhhhhccCc-eecccceec-ceeecceeeeeecChhhhhhhhhCCceEEEEeeC-CCcEEEEcceecC Q lcl|Aclame:pro 468 WVPLAADIAGLCAYTDQVSHP-WMSPAGYRR-GQIRNCIKLAIEPKQSMRDTMYQVAINPVTGFAG-GDGFVLFGDKMAT 544 (663) Q Consensus 468 ~~p~s~~~AG~~a~~d~~~g~-~~span~~~-~~i~~~~~~~~~~~~~~~~~Ln~~~in~i~~~~~-~~G~~~wG~rT~~ 544 (663) ..+.+.+.|..+.+|-++-. -..-..|.+ .++ ....++..|.+.|..+|+|++..+.+ ..-+.+|-.-+++ T Consensus 293 -~~~~aa~~g~~as~nf~~~~g~~T~~fkq~~~Gi-----~a~~lt~t~a~al~~~~~N~y~~~~~~~~~~~~~~~G~~s 366 (501) T protein:vir:10 293 -QATAGAVMGYAASINFQLRNGRTVLAFRQFNAGV-----PATAHDLPTANALRSNNYTYIGAYANAANNYTIAYDGKLS 366 (501) T ss_pred -CcHHHHHHHHHHhhCcccCccceeeeccccCCCc-----CcccCCHHHHHHHHhcCCeEEEEeccccceeeEEecCeee Confidence 12456777888888754321 011113322 122 12457899999999999999988864 2347788555666 Q ss_pred CCCccceeeehhhHHHHHHHHHHHHHHHhhc----ccCCHHHHHHHHHHHHHHHHHHHhcCceE---------------- Q lcl|Aclame:pro 545 QVPSPFDRINVRRLFNMLKKNIGDTSKYELF----ENNDAFTRQSFRMETSQYLDGIRSLGGCY---------------- 604 (663) Q Consensus 545 ~~~~~~~~i~vrR~~~~i~~~~~~~~~~~v~----epn~~~~~~~v~~~i~~~L~~l~~~gal~---------------- 604 (663) + .|.+|.+-+-.+|++..++..+...+- =|-+..=...|+..|+.-|++-+++|.|. T Consensus 367 G---~~~wiD~~~~~~Wl~~~iq~~l~~ll~~~~kIPyt~~G~~~l~a~v~~~l~~av~nG~I~~Gv~l~~~q~~~i~~~ 443 (501) T protein:vir:10 367 G---KFLWVDTYLDQIYLNAELQRAEFEAMLAYNSLPYNEDGYTALYRAGVDVIDAAVTSGIIRAGVTLTNSQLQQIDAA 443 (501) T ss_pred c---cceeehhhhhHHHHHHHHHHHHHHHHHhcCCcccCHHHHHHHHHHHHHHHHHHHhCceeecCCCCCcccceeeccc Confidence 5 377788888888888888888876443 35577778889999999999999999882 Q ss_pred -------------EEEEEEccCCCCHHH-hhCCEEEEEEEEEecCcceEEEEEEEEeecccchhhhh Q lcl|Aclame:pro 605 -------------DFRVVCDTTNNTPNV-IDRNEFVGTIYVKPPRSINYITLNMVATSTGANFDELI 657 (663) Q Consensus 605 -------------g~~v~~d~~~nt~~~-i~~G~~~~~i~~~p~~p~e~i~~~~~~~~~~~~~~e~~ 657 (663) ||.+.++....++++ ..+....+.+.++---.+++|.+-. .||| T Consensus 444 ~g~~~~~~~v~~~Gyy~~~~~~~~~~~~R~~R~~p~~~~~y~~~gaIh~v~i~s---------~~v~ 501 (501) T protein:vir:10 444 AGVAGAGQLVQTRGWYFLIGDPANPGQARQNRTTPACTLWYSDGGSIQQLTIGS---------NAVI 501 (501) T ss_pred cCccccccceeccceeEeeccccCChhhhhhccccceEEEEEeCCceeEEEeee---------eecC Confidence 377777744334334 3445557777777778888887632 2333 No 64 >protein:vir:3636 Length: 501 # NCBI annotation: gp04 # Family: family:all:396 # MgeID: mge:75 # MgeName: Bcep781 # Cross-refs: genbank:acc:NP_705631;genbank:gi:23752316;genbank:GeneID:955753 Probab=78.38 E-value=0.12 Score=25.73 Aligned_cols=450 Identities=11% Similarity=0.040 Sum_probs=196.0 Q ss_pred Cce--ecCceEEEEecCCCcccccCCC-ceEEEeecccCCCCcceEeCCHHHHHHHcCCcCCCchhHHHHHHHHh---c- Q lcl|Aclame:pro 1 MAL--LSPGIEMKETSINSTVVRSATG-RAAIVGKFAWGPAYEVRQVTNEVELVDMFGSPDNVTAPYFMSAMNFL---Q- 73 (663) Q Consensus 1 ~~~--~~PGVyveEv~~~~~i~~v~Ts-~~afvG~~~~Gpv~~p~~i~s~~e~~~~FG~~~~~~~~~~~~~~~F~---n- 73 (663) |.+ +.=--||+-.+.-.+-.+..-+ .+-+++....=|+++...-+|..|-...|| ..+.++.+++.+|- | T Consensus 1 m~~~~ip~s~iV~V~~~v~~~~~~~~~~~~lllt~~~~~~~~r~~~y~s~~~V~~~FG---~~S~ey~aA~~yFs~~~~q 77 (501) T protein:vir:36 1 MPTTTIPIDQIVQMLPGVIGAGGAPGRLTGLVLTQDTSVQPGQLADFFQETDVENWFG---ALSNEAKIADAYFPGIVNG 77 (501) T ss_pred CCcCCcccceEEEEeeeeccCCCcceeeeeEEEeccCCCCCcceeeecCHHHHHHhcC---CChHHHHHHHHHhhcccCC Confidence 887 3334555544422222222222 233444444457887778889999999999 57778888888885 2 Q ss_pred C--CceEEEEEeccccccccccccccceeeeeccccccccccccccccccccccccceeeeeeecccceeeeeecccchh Q lcl|Aclame:pro 74 Y--GNDLRLVRVIDMEKAKNASPLVNQVSVTITTEGQGYTVGDAITVKYNNATITEAGKVTAVDSDGKIKSLFVPTAEII 151 (663) Q Consensus 74 G--G~~~~vvRv~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~v~~~~~~g~~~~~~~~~~~~~ 151 (663) - =+++||-|-.+.... +...++.+. .. +..+ ... ....+.+... +......++....... T Consensus 78 ~~~P~~l~igR~~~~a~~--~~l~g~~l~--~~------~~a~---~~~----~sg~l~vti~-g~~~~~~i~lS~~ts~ 139 (501) T protein:vir:36 78 GQLPYDLKFARYVAADAP--ASVYGIPLT--GV------TLAQ---LQG----YSGTLTVTTA-AQHVSANISLAAATSF 139 (501) T ss_pred CccccEEEEEeecCcCcc--eeEeccchh--hh------hhhh---ccc----eeEEEEEEec-ceeeeeecccccccCH Confidence 2 337899887543211 000000000 00 0000 000 0011111110 0000000000000000 Q ss_pred cccccccccccceeceeeeecccccceeeeeecccccccccccccccccccccccccccccccccccccceeeecchhhc Q lcl|Aclame:pro 152 AKTRQLGTYPTLGDNWRIDVSGASGGSAAALALGNIVVDSGVTFGNSEDAPAVMTSPAVMEKYAKFGMPLISAVYPGEIG 231 (663) Q Consensus 152 ~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~g~~g 231 (663) .. ... .+...+...+. .... +.....-..++.+ . | T Consensus 140 ~~---------vA~-----------~i~~al~~~~~----tv~~-d~~~~~f~i~s~t-------~-------------G 174 (501) T protein:vir:36 140 AN---------AAT-----------LIEAAFTSPDF----VVAY-DALRNRFTVVTNA-------T-------------G 174 (501) T ss_pred HH---------HHH-----------HHhhhhcCcce----EEEE-cCcceeEEEEecc-------C-------------C Confidence 00 000 00000000000 0000 0000000000000 0 0 Q ss_pred cccccccccccccccccccceecccceecccceeEEEecccccccceeeeccCCcceeeEeeeecccccccccchhhhhh Q lcl|Aclame:pro 232 STVEVEIVSKTAFNSGAQQTIYPFGGTRTSNARGVIQYGPMTDDQFAIIVRRDGIVVESTVLSTRKGDRDVYGSNIFMDD 311 (663) Q Consensus 232 ~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (663) ....+..... ....... ..+. . T Consensus 175 ~~~~i~~~t~--~~~ia~~--------------------------l~Lt--~---------------------------- 196 (501) T protein:vir:36 175 TAAAISAVTG--TNNFADE--------------------------IGLS--A---------------------------- 196 (501) T ss_pred cceeeEeeec--ccchhhh--------------------------hccc--c---------------------------- Confidence 0000000000 0000000 0000 0 Q ss_pred hhcCCCceEEEEeecccCCccceeEEecCcccccccccchhhhHHHHHhhhhccccceeEEeeccCcCChhHHHHHHHHH Q lcl|Aclame:pro 312 YFRNGGSNFIFASSEGWPAGFTGIIQLGGGTSANADVGADELIKGWDLFSDREALHVNLMIAGACGSDGAEIASTVQKYV 391 (663) Q Consensus 312 ~~~~~~s~~v~~~~~~~~~~~~~~~~l~gg~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 391 (663) ..+. .+.. . +.+ .++...++..+.+...--..+..+.. . ..++ ..++ T Consensus 197 ---~~~a-~v~~---------------~-g~~------~et~~~al~a~~~~s~~Wy~f~~a~~--~-~~~~----~la~ 243 (501) T protein:vir:36 197 ---AAGA-TLQA---------------A-GVA------ADTPASAMNRAVGLSRNWATFTTAWT--A-VIAD----RLAF 243 (501) T ss_pred ---cCcc-eEEe---------------c-ccc------cccHHHHHHHHHhccCceEEEEEecC--C-ChHH----HHHH Confidence 0000 0000 0 000 00111222222222110011111111 1 1111 2355 Q ss_pred HHHHHhhCCeEEEe--cccccccccccccccHHHHHHHHhhcccccchhhhccCcCcceEEEecCceeecccccCceeEe Q lcl|Aclame:pro 392 VSLADDRQDCVAIV--NPPAELMVGIPTSTAVKNIVEWRNGMTGSGEVVDNNMNISSTYAFIIGNYKYQYDKYNDINRWV 469 (663) Q Consensus 392 ~~~~~~~~~~~~i~--d~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~p~~~~~d~~~~~~~~~ 469 (663) ..++|....+|.+. |.... ........++...... -+..+....|.. . T Consensus 244 A~wiea~~~~f~~~~~~~~~~----~~~~~~~~~i~~~l~~-------------~~y~~t~~~y~~-------------~ 293 (501) T protein:vir:36 244 ASWNSGQAYKYMYVAPDLEAA----SIVSNNAASFGAQVFA-------------APYQGTLPLYGD-------------Q 293 (501) T ss_pred HHHHhhcCceEEEEEecCchh----hhhccchhhHHHHHHh-------------cCCCcEEEEcCC-------------C Confidence 66666655544332 21100 0000111111111111 112233333311 1 Q ss_pred chHHHHHHHHHhhhhcc--C--ceecccceec-ceeecceeeeeecChhhhhhhhhCCceEEEEeeC-CCcEEEEcceec Q lcl|Aclame:pro 470 PLAADIAGLCAYTDQVS--H--PWMSPAGYRR-GQIRNCIKLAIEPKQSMRDTMYQVAINPVTGFAG-GDGFVLFGDKMA 543 (663) Q Consensus 470 p~s~~~AG~~a~~d~~~--g--~~~span~~~-~~i~~~~~~~~~~~~~~~~~Ln~~~in~i~~~~~-~~G~~~wG~rT~ 543 (663) .+.+.+.|..+.+|-++ | -|+ +|.+ .++ ....++..|.+.|..+|+|++..|.+ ...+.+|-.-++ T Consensus 294 ~~~aa~~g~~as~nf~~~~g~~T~~---fkq~~~Gi-----~a~~l~~t~a~al~~~~~N~y~~~~~~~~~~~~~~~G~~ 365 (501) T protein:vir:36 294 ATAGAVMGYAASINFQLRNGRTVLA---FRQFNAGV-----PATVHDLPTANALRSNNYTYIGAYANAANNYTIAYDGKL 365 (501) T ss_pred CHHHHHHHHHHhcCcccCcceeeee---ccccCCCc-----CcCcCCHHHHHHHHhcCCcEEEEEecccceeeEEEcCee Confidence 34567788888887543 2 222 3332 122 12456789999999999999887764 234777765566 Q ss_pred CCCCccceeeehhhHHHHHHHHHHHHHHHhhcc----cCCHHHHHHHHHHHHHHHHHHHhcCceE--------------- Q lcl|Aclame:pro 544 TQVPSPFDRINVRRLFNMLKKNIGDTSKYELFE----NNDAFTRQSFRMETSQYLDGIRSLGGCY--------------- 604 (663) Q Consensus 544 ~~~~~~~~~i~vrR~~~~i~~~~~~~~~~~v~e----pn~~~~~~~v~~~i~~~L~~l~~~gal~--------------- 604 (663) ++ +|.||-+.+-.+|++..++..+...+-. |-|+.=...|+..|+.-|++-+++|.|. T Consensus 366 sG---~~~wiD~~~g~dWL~~~iq~~l~~ll~~~~KIPytd~G~~~l~a~i~~~l~~av~nG~I~~Gv~~~~~q~~~I~~ 442 (501) T protein:vir:36 366 SG---KFLWVDTYLDQIYLNAELQRAEFEAMLAYNSLPYNEDGYTGLYRAGVDVIDAAVTSGIIRAGVTLTNSQLQQIDK 442 (501) T ss_pred ec---cchhhhHHHhHHHHHHHHHHHHHHHHhcCCCCccChhhHHHHHHHHHHHHHHHHhCceeecCCCCCcccceeecc Confidence 65 3678899999999999999999876543 4577778889999999999999999882 Q ss_pred --------------EEEEEEccCCCCHHHh-hCCEEEEEEEEEecCcceEEEEEEEEeecccchhhhh Q lcl|Aclame:pro 605 --------------DFRVVCDTTNNTPNVI-DRNEFVGTIYVKPPRSINYITLNMVATSTGANFDELI 657 (663) Q Consensus 605 --------------g~~v~~d~~~nt~~~i-~~G~~~~~i~~~p~~p~e~i~~~~~~~~~~~~~~e~~ 657 (663) ||.+.++....++++. .+....+.+.++---.+++|.+-.. ||| T Consensus 443 ~~g~~~~~~~v~~~Gyy~~~~~~~~~~~~R~~R~~p~~~~~y~~~gaIh~v~i~s~---------~v~ 501 (501) T protein:vir:36 443 AARVAGAGQLVQTRGWYFLIGDPANPGQARQNRTTPACTLWYSDGGSIQSLTIGSN---------AVI 501 (501) T ss_pred cccccccccceeccceEEeeCcccCChhhhhhcccCcEEEEEEeCCceeEEEeeee---------eeC Confidence 4778787544444443 3455577778888888888876432 333 No 65 >protein:vir:99586 Length: 507 # NCBI annotation: hypothetical protein # Family: family:all:396 # MgeID: mge:1544 # MgeName: BcepF1 # Cross-refs: genbank:acc:YP_001039795;genbank:gi:126011045;genbank:GeneID:4818281 Probab=77.72 E-value=0.12 Score=25.60 Aligned_cols=457 Identities=12% Similarity=0.066 Sum_probs=204.5 Q ss_pred CceecCceEEEEecCCCcc--cccCCCceEEEeecccCCCCcceEeCCHHHHHHHcCCcCCCchhHHHHHHHHhcCC--- Q lcl|Aclame:pro 1 MALLSPGIEMKETSINSTV--VRSATGRAAIVGKFAWGPAYEVRQVTNEVELVDMFGSPDNVTAPYFMSAMNFLQYG--- 75 (663) Q Consensus 1 ~~~~~PGVyveEv~~~~~i--~~v~Ts~~afvG~~~~Gpv~~p~~i~s~~e~~~~FG~~~~~~~~~~~~~~~F~nGG--- 75 (663) |-=+ --||+-.+.-.+- ....-.++-|++.-..=|+++....+|..|-...|| ..+.++.+++.||-+-- T Consensus 1 mip~--s~iVnV~~~v~~~a~~~~~~~~~lilt~~~~~~~~r~~~y~s~~~V~~~FG---~~S~ey~aA~~yFsq~p~~~ 75 (507) T protein:vir:99 1 MISQ--SRYVRIVSGVGAGAPVAQRRLIMRVMTTNAVLPPGVVFESSSADAVGAYFG---MASEEYKRAKAYMSFISKSI 75 (507) T ss_pred CCCc--cceeEEeeeccccCcccccccceeeeccccCCCccceEeecCHHHHHHhcC---CChHHHHHHHHHhccCCCCC Confidence 4322 2344433322222 222235667777666667888888899999999999 57778888888888653 Q ss_pred ---ceEEEEEeccccccccccccccceeeeeccccccccccccccccccccccccceeeeeeecccceeeeeecccchhc Q lcl|Aclame:pro 76 ---NDLRLVRVIDMEKAKNASPLVNQVSVTITTEGQGYTVGDAITVKYNNATITEAGKVTAVDSDGKIKSLFVPTAEIIA 152 (663) Q Consensus 76 ---~~~~vvRv~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~v~~~~~~g~~~~~~~~~~~~~~ 152 (663) ++|||-|-..... +..+.+.. .. ......... . + T Consensus 76 ~~P~~L~igR~~~~~~---~a~l~g~~----------~~-~~l~~~~~~---~-----------~--------------- 112 (507) T protein:vir:99 76 NSPSYISFARWVNAAI---ASMIVGDS----------LV-KNLPALKAV---A-----------T--------------- 112 (507) T ss_pred cccceEEEEeecCccc---cceeecch----------hh-hhHHHHhhh---c-----------c--------------- Confidence 3889988754211 00000000 00 000000000 0 0 Q ss_pred ccccccccccceeceeeeecccccceeeeeecccccccccccccccccccccccccccccccccccccceeeecchhhcc Q lcl|Aclame:pro 153 KTRQLGTYPTLGDNWRIDVSGASGGSAAALALGNIVVDSGVTFGNSEDAPAVMTSPAVMEKYAKFGMPLISAVYPGEIGS 232 (663) Q Consensus 153 ~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~g~~g~ 232 (663) +. ..+.+.+... ....+.+... ......... T Consensus 113 --------G~----lti~v~G~~~-t~~~i~lS~~--------ts~~~vAs~---------------------------- 143 (507) T protein:vir:99 113 --------PT----LSLSIGGTVV-PIAGIDLTAA--------LTLTDVAAT---------------------------- 143 (507) T ss_pred --------ee----EEEEEcCcee-Eecccccccc--------CCHHHHHHH---------------------------- Confidence 00 0000000000 0000000000 000000000 Q ss_pred ccccccccccccccccccceecccceecccceeEEEecccccccceeeeccCCcceee-Eeeeecccccccccchhhhhh Q lcl|Aclame:pro 233 TVEVEIVSKTAFNSGAQQTIYPFGGTRTSNARGVIQYGPMTDDQFAIIVRRDGIVVES-TVLSTRKGDRDVYGSNIFMDD 311 (663) Q Consensus 233 ~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~ 311 (663) +...+.. .. .+......+.+. .....|.+.....|..... +.....++ ..+.. T Consensus 144 -i~~~l~a------~~----------~~~~~~~tv~~d-~~~~~F~v~s~~tG~~s~i~~at~~~~g--------t~~s~ 197 (507) T protein:vir:99 144 -LQTKIRA------SA----------NAELATATVTFN-TTTNQFVLNGTTTGALAPTITAVRTDPA--------TDISS 197 (507) T ss_pred -HHHhhhc------cc----------cccccceEEEEe-cCCceEEEEeeeccccceeEEEEcCCch--------hhHHH Confidence 0000000 00 000000000000 0011222222222211111 11000000 00001 Q ss_pred hhcCCCceEEEEeecccCCccceeEEecCcccccccccchhhhHHHHHhhhhccccceeEEeeccCcCChhHHHHHHHHH Q lcl|Aclame:pro 312 YFRNGGSNFIFASSEGWPAGFTGIIQLGGGTSANADVGADELIKGWDLFSDREALHVNLMIAGACGSDGAEIASTVQKYV 391 (663) Q Consensus 312 ~~~~~~s~~v~~~~~~~~~~~~~~~~l~gg~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 391 (663) .+.... .+.....|. ..++...++..+.+...--.-+..+......+ + -+.++ T Consensus 198 l~~~~~---------------~~a~~~~g~-------~aet~~~a~~a~~~~~~nW~~~~~a~~~~~td-~----~~lal 250 (507) T protein:vir:99 198 LLGWTN---------------TGTVFVKGQ-------AAETPDTSISKSAAISTNFGSFIYTSTPALTN-D----QITAV 250 (507) T ss_pred Hhcccc---------------ccceEeecc-------cccCHHHHHHHHHhhcCCeEEEEEEeccccCh-H----HHHHH Confidence 100000 001111111 11233344544443321111111111111111 1 23566 Q ss_pred HHHHHhhCCeEEEecccccccccccccccHHHHHHHHhhcccccchhhhccCcCcceEEEecCceeecccccCceeEech Q lcl|Aclame:pro 392 VSLADDRQDCVAIVNPPAELMVGIPTSTAVKNIVEWRNGMTGSGEVVDNNMNISSTYAFIIGNYKYQYDKYNDINRWVPL 471 (663) Q Consensus 392 ~~~~~~~~~~~~i~d~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~p~~~~~d~~~~~~~~~p~ 471 (663) ..++|....+|.+.-.-.. . ... ....... ....+...++.+.. ..-.+ T Consensus 251 A~wiea~~~~f~~~~~~~~-------a-~~~--~~~~~~~------------~~~~~~~~~~~~~~---------~~~~~ 299 (507) T protein:vir:99 251 ASWNASQNNMYMYSVPTTI-------A-NIG--TLYAAVK------------GFSGCALNITSDSL---------PVDYI 299 (507) T ss_pred HHHHhhcCcEEEEEEecCc-------h-hhh--hhhhhhh------------hcceeEEEeecccc---------cchhH Confidence 7777776666654421100 0 000 0000000 00111111211111 11124 Q ss_pred HHHHHHHHHhhhhcc--C--ceecccceecceeecceeeeeecChhhhhhhhhCCceEEEEeeC-CCcEEEEcc-eecCC Q lcl|Aclame:pro 472 AADIAGLCAYTDQVS--H--PWMSPAGYRRGQIRNCIKLAIEPKQSMRDTMYQVAINPVTGFAG-GDGFVLFGD-KMATQ 545 (663) Q Consensus 472 s~~~AG~~a~~d~~~--g--~~~span~~~~~i~~~~~~~~~~~~~~~~~Ln~~~in~i~~~~~-~~G~~~wG~-rT~~~ 545 (663) .+.+.|.++.+|-++ | -|+ .|.+.+|. ...++..|.+.|..+|+|++..+.+ ...+.+|-. .++.+ T Consensus 300 ~aa~~g~~as~nf~~~ng~~T~~---fk~l~GV~-----a~~lt~t~a~al~~~n~N~y~~~a~~~~~~~~~~~G~~~gG 371 (507) T protein:vir:99 300 EQSPCEILAATDYTRVNATQNYM---YYQFPSRN-----ITVSDDTTANLVDANRGNYIGQTQSAGQSLAFYQRGILCGG 371 (507) T ss_pred HHHHHHHHHhhccCcCccceeec---ccccCCcc-----cccCCHHHHHHHHhcCCeEEEEeccccceeeEEecCeeeCC Confidence 567778888777432 2 222 34333332 3458899999999999999988865 233666655 44444 Q ss_pred CCccceeeehhhHHHHHHHHHHHHHHHhhc----ccCCHHHHHHHHHHHHHHHHHHHhcCceE----------------- Q lcl|Aclame:pro 546 VPSPFDRINVRRLFNMLKKNIGDTSKYELF----ENNDAFTRQSFRMETSQYLDGIRSLGGCY----------------- 604 (663) Q Consensus 546 ~~~~~~~i~vrR~~~~i~~~~~~~~~~~v~----epn~~~~~~~v~~~i~~~L~~l~~~gal~----------------- 604 (663) . .+|.++.+-+=.+||+..++..+....- =|-++.=...|+..|+.-|++-+++|.|. T Consensus 372 ~-~~fid~d~~~~~~WL~~~iq~~l~~l~~~~~kIPyt~~G~~~l~a~i~~~l~~av~nG~I~~Gvtl~~~q~~~in~~~ 450 (507) T protein:vir:99 372 P-NDAVDMNIYANEIWLKSAISAQILSLFLNVPRVPANETGESMLLSVIQSVVNTAKNNGTISAGKNLNVIQQQYITQIS 450 (507) T ss_pred c-ccceeeeeecchHHHHHHHHHHHHHHHhcCCCCccChhhHHHHHHHHHHHHHHHHhccccccCCcccccchheecccc Confidence 3 2577777777777888888888876433 34577778889999999999999999883 Q ss_pred ------------EEEEEEc-cCCCCHH-HhhCCEEEEEEEEEecCcceEEEEEEEEe Q lcl|Aclame:pro 605 ------------DFRVVCD-TTNNTPN-VIDRNEFVGTIYVKPPRSINYITLNMVAT 647 (663) Q Consensus 605 ------------g~~v~~d-~~~nt~~-~i~~G~~~~~i~~~p~~p~e~i~~~~~~~ 647 (663) ||.+.++ .++.+++ ...++...+.+.+.---.+++|++...-. T Consensus 451 ~~~~~~~~~~~~Gyy~~~~~~s~~~~~~r~~r~~~~~~~~y~~~gaI~~v~~~~~~v 507 (507) T protein:vir:99 451 GDANAWRQVANIGYWLNITFSSYTNPNTQLTEWKASYQLIYSKDDAIRFVEGTDTLI 507 (507) T ss_pred cccccccceeccceEEEeCChHhcChhhhhccccceEEEEEEeCCeEEEEEeeeecC Confidence 2778876 4455544 44467778888888888899988865444 No 66 >protein:vir:96104 Length: 504 # NCBI annotation: hypothetical protein ORF029 # Family: family:all:396 # MgeID: mge:1597 # MgeName: F8 # Cross-refs: genbank:acc:YP_001294446;genbank:gi:149408343;genbank:GeneID:5237223 Probab=72.54 E-value=0.18 Score=24.65 Aligned_cols=453 Identities=11% Similarity=0.051 Sum_probs=197.2 Q ss_pred CceecCceEEEEecCC--CcccccCCCceEEEeecccCCCCcceEeCCHHHHHHHcCCcCCCchhHHHHHHHHhcCC--- Q lcl|Aclame:pro 1 MALLSPGIEMKETSIN--STVVRSATGRAAIVGKFAWGPAYEVRQVTNEVELVDMFGSPDNVTAPYFMSAMNFLQYG--- 75 (663) Q Consensus 1 ~~~~~PGVyveEv~~~--~~i~~v~Ts~~afvG~~~~Gpv~~p~~i~s~~e~~~~FG~~~~~~~~~~~~~~~F~nGG--- 75 (663) |-=++ -||+-.+.- .......-.+.-|++.-..=|+++....+|..|-...|| ..+.++.+++.||-+-- T Consensus 1 mip~s--~iV~V~~~v~~~~~~~~~~~~~l~l~~~~~~~~~r~~~y~s~~~V~~~FG---~~S~ey~aA~~yF~~~~~~~ 75 (504) T protein:vir:96 1 MISQS--RYIRIISGVGAGAPVAGRKLILRVMTTNNVIPPGIVIEFDNANAVLSYFG---AQSEEYQRAAAYFKFISKSV 75 (504) T ss_pred CCCcc--ceeEeeecccccccccccccceeEeecccCCCccceEEecCHHHHHHhcC---CChHHHHHHHHHhhcCCCCC Confidence 43333 344433321 123333355677777766667888888899999999999 56688888899998743 Q ss_pred ---ceEEEEEeccccccccccccccceeeeeccccccccccccccccccccccccceeeeeeecccce-eeeeecccchh Q lcl|Aclame:pro 76 ---NDLRLVRVIDMEKAKNASPLVNQVSVTITTEGQGYTVGDAITVKYNNATITEAGKVTAVDSDGKI-KSLFVPTAEII 151 (663) Q Consensus 76 ---~~~~vvRv~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~v~~~~~~g~~-~~~~~~~~~~~ 151 (663) +++||-|=..... +..+.+...... ........ ...+.+.. ++.... ..++......+ T Consensus 76 ~~P~~l~igR~~~~a~---~~~l~g~~~~~~-----------~~~~~~i~---~G~lsitv-~G~~~~~~~i~~S~~ts~ 137 (504) T protein:vir:96 76 NSPSSISFARWVNTAI---APMVVGDNLPKT-----------IADFAGFS---AGVLTIMV-GAAEKNITAIDTSAATSM 137 (504) T ss_pred ccccEEEEEeecCcCc---cceEEechhHHH-----------HHHHhhhh---ceEEEEEE-cceeeeecccccccccch Confidence 7999999543211 111101000000 00000000 00111111 000000 00000000000 Q ss_pred cc-cccccccccceeceeeeecccccceeeeeecccccccccccccccccccccccccccccccccccccceeeecchhh Q lcl|Aclame:pro 152 AK-TRQLGTYPTLGDNWRIDVSGASGGSAAALALGNIVVDSGVTFGNSEDAPAVMTSPAVMEKYAKFGMPLISAVYPGEI 230 (663) Q Consensus 152 ~~-~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~g~~ 230 (663) .. +.... ...... .........+..+ .... .-.+++. ..+........... T Consensus 138 ~~vA~~i~------~al~~~-------~~~~~~~~tv~~d------~~~~-~f~its~-------~tg~~~~~~~~~a~- 189 (504) T protein:vir:96 138 DNVASIIQ------TEIRKN-------TDPQLAQATVTWN------PNTN-QFTLVGA-------TIGTGVLAVAKSAD- 189 (504) T ss_pred HHHHHHHH------hhhhcc-------cccccccceEEEe------ccCC-eEEEEee-------ccccceeEEEeecc- Confidence 00 00000 000000 0000000000000 0000 0000000 00000000000000 Q ss_pred ccccccccccccccccccccceecccceecccceeEEEecccccccceeeeccCCcceeeEeeeecccccccccchhhhh Q lcl|Aclame:pro 231 GSTVEVEIVSKTAFNSGAQQTIYPFGGTRTSNARGVIQYGPMTDDQFAIIVRRDGIVVESTVLSTRKGDRDVYGSNIFMD 310 (663) Q Consensus 231 g~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (663) ..++. .. . + + T Consensus 190 --~~~~~-----------~~-----------------------------l----g-------l----------------- 199 (504) T protein:vir:96 190 --PQDMS-----------TA-----------------------------L----G-------W----------------- 199 (504) T ss_pred --ccchh-----------hh-----------------------------h----h-------c----------------- Confidence 00000 00 0 0 0 Q ss_pred hhhcCCCceEEEEeecccCCccceeEEecCcccccccccchhhhHHHHHhhhhccccceeEEeeccCcCChhHHHHHHHH Q lcl|Aclame:pro 311 DYFRNGGSNFIFASSEGWPAGFTGIIQLGGGTSANADVGADELIKGWDLFSDREALHVNLMIAGACGSDGAEIASTVQKY 390 (663) Q Consensus 311 ~~~~~~~s~~v~~~~~~~~~~~~~~~~l~gg~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 390 (663) ..+.. .... |.+ ..+...++..+.+...--..+..+... ...++ ..+ T Consensus 200 ---~~~~~-----------------~~v~-g~~------aet~~~al~al~~~~~~Wy~f~~a~~~--~~dd~----ila 246 (504) T protein:vir:96 200 ---STSNV-----------------VNVA-GQA------ADLPDAAVAKSTNVSNNFGSFLFAGAT--LDNDQ----IKA 246 (504) T ss_pred ---ccccc-----------------eEEe-ecc------cccHHHHHHHHHhhcCCeEEEEEEecc--CCHHH----HHH Confidence 00000 0000 000 011112222222222110111222111 11111 234 Q ss_pred HHHHHHhhCCeEEEecccccccccccccccHHHHHHHHhhcccccchhhhccCcCcceEEEecCceeecccccCceeEec Q lcl|Aclame:pro 391 VVSLADDRQDCVAIVNPPAELMVGIPTSTAVKNIVEWRNGMTGSGEVVDNNMNISSTYAFIIGNYKYQYDKYNDINRWVP 470 (663) Q Consensus 391 ~~~~~~~~~~~~~i~d~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~p~~~~~d~~~~~~~~~p 470 (663) +..++|....++.+... .. . ... ......... .......+++.. .+ .. - T Consensus 247 lA~w~ea~~~~~~~~~~--~~----~-~~~-~~~~~~~~~-------------~~~~~~~~~~~~------~~---~~-~ 295 (504) T protein:vir:96 247 VSAWNAAQNNQFIYTVA--TS----L-ANL-GALFDLVKG-------------NSGTALNVLSAT------AS---ND-F 295 (504) T ss_pred HHHHHhhcCceEEEEEe--ec----c-cch-hhHHHhhhh-------------cceeEEEEeecC------cc---ch-h Confidence 55566654434432211 00 0 000 011000000 001111222111 00 11 2 Q ss_pred hHHHHHHHHHhhhhcc--C--ceecccceecceeecceeeeeecChhhhhhhhhCCceEEEEeeCC-CcEEEE-cceecC Q lcl|Aclame:pro 471 LAADIAGLCAYTDQVS--H--PWMSPAGYRRGQIRNCIKLAIEPKQSMRDTMYQVAINPVTGFAGG-DGFVLF-GDKMAT 544 (663) Q Consensus 471 ~s~~~AG~~a~~d~~~--g--~~~span~~~~~i~~~~~~~~~~~~~~~~~Ln~~~in~i~~~~~~-~G~~~w-G~rT~~ 544 (663) +..+..|.++.+|-++ | .|+ .|.+.+|. ...++..|.+.|..+|+|++..|.+. ..+.+| ...+++ T Consensus 296 ~~~~~~~~~as~~f~~~ng~~T~~---fk~l~GVt-----a~~lt~t~~~aL~~~~~N~y~~~a~~~~~~~~~~~G~~~g 367 (504) T protein:vir:96 296 VEQCPSEILAATNYDEPGASQNYM---YYQFPGRN-----ITVSDDTAANTVDKSRGNYIGVTQANGQQLAFYQRGILCG 367 (504) T ss_pred HHHHHHHHHHhcCcCccccccccc---ccccCCcC-----cccCCHHHHHHHHhcCCeEEEEeecccceeeEEecCeeeC Confidence 3455567777776333 2 332 44433332 34678999999999999999887641 234555 456666 Q ss_pred CCCccceeeehhhHHHHHHHHHHHHHHHhhcc----cCCHHHHHHHHHHHHHHHHHHHhcCce----------------- Q lcl|Aclame:pro 545 QVPSPFDRINVRRLFNMLKKNIGDTSKYELFE----NNDAFTRQSFRMETSQYLDGIRSLGGC----------------- 603 (663) Q Consensus 545 ~~~~~~~~i~vrR~~~~i~~~~~~~~~~~v~e----pn~~~~~~~v~~~i~~~L~~l~~~gal----------------- 603 (663) +.. +|.+|.+-+-.+||+..|+..+....-. |-|+.=...|+..|+.-|++-+++|.| T Consensus 368 G~~-~~~wiDv~~~~~WL~~~lq~~l~~l~~~~~kIPyt~~Gi~~l~a~i~~vl~~av~~G~I~~Gv~~~~~q~~~I~~~ 446 (504) T protein:vir:96 368 GPT-DAVDMNVYANEIWLKSAIAQALLDLFLNVNAVPASMVGEAMTLAVLQPVLDKATSNGTFTYGKDISAVQQQYITQI 446 (504) T ss_pred Ccc-ccchhhhhhhHHHHHHHHHHHHHHHHhcCCCcccCHhhHHHHHHHHHHHHHHHHhcceeccCccCCccchheeccc Confidence 542 5788999999999999999999875433 347777888999999999999999987 Q ss_pred ------------EEEEEEEc-cCCCCHHHhh-CCEEEEEEEEEecCcceEEEEEEEEe Q lcl|Aclame:pro 604 ------------YDFRVVCD-TTNNTPNVID-RNEFVGTIYVKPPRSINYITLNMVAT 647 (663) Q Consensus 604 ------------~g~~v~~d-~~~nt~~~i~-~G~~~~~i~~~p~~p~e~i~~~~~~~ 647 (663) .||.|.++ .++-++.|.. ++-..+.+.++---.+++|++.-.-. T Consensus 447 ~~~d~~~~~~~~~GYyv~~~~~s~~s~~~r~~R~~~~~~~~y~~~gaI~~v~~~~~~v 504 (504) T protein:vir:96 447 TGDRRAWRQVQTLGYWINITFSSYTNSNTGLTEWKANYTLIYSKGDAIRFVEGSDVMI 504 (504) T ss_pred ccccccccceeccceEEEecChhccChhHhhhccccceEEEEEECCeEEEEEeccccC Confidence 24888886 4455555444 45557888888888888887764333 No 67 >protein:vir:78611 Length: 501 # NCBI annotation: BcepNY3gp03 # Family: family:all:396 # MgeID: mge:1854 # MgeName: BcepNY3 # Cross-refs: genbank:acc:YP_001294840;genbank:gi:149882903;genbank:GeneID:5291082 Probab=61.36 E-value=0.35 Score=23.05 Aligned_cols=453 Identities=11% Similarity=0.044 Sum_probs=193.5 Q ss_pred Cce--ecCceEEEEecCCCcccccCCC-ceEEEeecccCCCCcceEeCCHHHHHHHcCCcCCCchhHHHHHHHHh----c Q lcl|Aclame:pro 1 MAL--LSPGIEMKETSINSTVVRSATG-RAAIVGKFAWGPAYEVRQVTNEVELVDMFGSPDNVTAPYFMSAMNFL----Q 73 (663) Q Consensus 1 ~~~--~~PGVyveEv~~~~~i~~v~Ts-~~afvG~~~~Gpv~~p~~i~s~~e~~~~FG~~~~~~~~~~~~~~~F~----n 73 (663) |.+ +.=--||+-.+.-.+-.+..-+ .+-+++....=|+++....+|..|-...|| ..+.++.+++.+|- + T Consensus 1 m~~~~ip~s~iV~V~~~v~~~~~~~~~~~~lll~~~~~~~~~r~~~y~s~~~V~~~FG---~~S~ey~aA~~yFs~~~~q 77 (501) T protein:vir:78 1 MPTTTIPIDQIVQMLPGVIGAGGAPGRLTGLVLTQDTSIQPGQLADFFQKTDVENWFG---GLSNEAVIADAYFPGIVNG 77 (501) T ss_pred CCcCccccceEEEEeeecccCCCcceeeeeEEEecCCCCCccceeeecCHHHHHHhcC---CChHHHHHHHHHhhcCCCC Confidence 887 3334556544432222222211 233444455568888888899999999999 57778888888886 2 Q ss_pred C--CceEEEEEeccccccccccccccceeeeeccccccccccccccccccccccccceeeeeeecccceeeeeecccchh Q lcl|Aclame:pro 74 Y--GNDLRLVRVIDMEKAKNASPLVNQVSVTITTEGQGYTVGDAITVKYNNATITEAGKVTAVDSDGKIKSLFVPTAEII 151 (663) Q Consensus 74 G--G~~~~vvRv~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~v~~~~~~g~~~~~~~~~~~~~ 151 (663) - =+++||-|-...... +...++.+...... + +.. ....+.+... +......++....... T Consensus 78 ~~~P~~l~igR~~~~a~~--~~l~g~~l~~~~la--------~---~~~----~~G~l~iti~-g~~~~~~i~~S~~ts~ 139 (501) T protein:vir:78 78 GQLPYDLKFARYVAADAP--ASVYGIPLTGVTLT--------Q---LQG----YSGTLTVTTA-AQHVSSNISLAAATSF 139 (501) T ss_pred CcccceEEEEeecccCcc--eeEeccceeccchh--------h---hce----eeeEEEEEec-cceeeeccccccccCH Confidence 2 236799886543211 00001111000000 0 000 0011111110 0000000000000000 Q ss_pred cccccccccccceeceeeeecccccceeeeeecccccccccccccccccccccccccccccccccccccceeeecchhhc Q lcl|Aclame:pro 152 AKTRQLGTYPTLGDNWRIDVSGASGGSAAALALGNIVVDSGVTFGNSEDAPAVMTSPAVMEKYAKFGMPLISAVYPGEIG 231 (663) Q Consensus 152 ~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~g~~g 231 (663) ..... .+...+...+. .... +.....-.+++.+ . | T Consensus 140 ~~vA~--------------------~i~~al~a~~~----tv~~-ds~~~~f~its~t-------~-------------G 174 (501) T protein:vir:78 140 ANAAT--------------------LIEAAFTSPDF----VVSY-DALRNRFVVNTNA-------T-------------G 174 (501) T ss_pred HHHHH--------------------HHHhhhcCcce----EEEE-ccccceEEEEeee-------c-------------C Confidence 00000 00000000000 0000 0000000000000 0 0 Q ss_pred cccccccccccccccccccceecccceecccceeEEEecccccccceeeeccCCcceeeEeeeecccccccccchhhhhh Q lcl|Aclame:pro 232 STVEVEIVSKTAFNSGAQQTIYPFGGTRTSNARGVIQYGPMTDDQFAIIVRRDGIVVESTVLSTRKGDRDVYGSNIFMDD 311 (663) Q Consensus 232 ~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (663) ...++..... ....... +.+.. T Consensus 175 ~~~~i~~~t~--~~~~a~~----------------------------l~Lt~---------------------------- 196 (501) T protein:vir:78 175 TAAAISAVTG--TNNLADE----------------------------LGLSA---------------------------- 196 (501) T ss_pred CceeEEEEec--ccchhhh----------------------------hcccc---------------------------- Confidence 0000000000 0000000 00000 Q ss_pred hhcCCCceEEEEeecccCCccceeEEecCcccccccccchhhhHHHHHhhhhccccceeEEeeccCcCChhHHHHHHHHH Q lcl|Aclame:pro 312 YFRNGGSNFIFASSEGWPAGFTGIIQLGGGTSANADVGADELIKGWDLFSDREALHVNLMIAGACGSDGAEIASTVQKYV 391 (663) Q Consensus 312 ~~~~~~s~~v~~~~~~~~~~~~~~~~l~gg~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 391 (663) ..+. .+... +. ..++...++..+.+...--..+..+.. ...++ ..++ T Consensus 197 ---~~~a-~v~~~----------------g~------~aet~~~a~~a~~~~~~~Wy~f~~a~~---~~~~~----~lal 243 (501) T protein:vir:78 197 ---AAGA-SLQAA----------------GV------AADTPASAMNRAVGLSRNWATFTTAWT---AVIAD----RLAL 243 (501) T ss_pred ---cCce-eeEec----------------cc------cccCHHHHHHHHHhccCceEEEEEecC---CCHHH----HHHH Confidence 0000 00000 00 001111222222222110011111111 11122 2355 Q ss_pred HHHHHhhCCeEEE--ecccccccccccccccHHHHHHHHhhcccccchhhhccCcCcceEEEecCceeecccccCceeEe Q lcl|Aclame:pro 392 VSLADDRQDCVAI--VNPPAELMVGIPTSTAVKNIVEWRNGMTGSGEVVDNNMNISSTYAFIIGNYKYQYDKYNDINRWV 469 (663) Q Consensus 392 ~~~~~~~~~~~~i--~d~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~p~~~~~d~~~~~~~~~ 469 (663) ..++|....+|.+ .|....... . ...+.+..+-. .. ...+...+|+ + . T Consensus 244 A~wiea~~~~f~~~~~~~~~~~~~----~-~~~~~i~~~l~----------a~--~y~~t~~~y~-----~--------~ 293 (501) T protein:vir:78 244 ASWNSGQAYKYMYVAPDLEPASIV----T-NNSASFGAQVF----------AA--PYQGTLPLYG-----D--------Q 293 (501) T ss_pred HHHHHhcCceEEEEEecCCcceee----c-ccchhHHHHHh----------hc--CCCceEEEcC-----C--------c Confidence 6666655444433 222111100 0 00111111100 01 1223444432 1 1 Q ss_pred chHHHHHHHHHhhhhccCc-eecccceec-ceeecceeeeeecChhhhhhhhhCCceEEEEeeC-CCcEEEEcceecCCC Q lcl|Aclame:pro 470 PLAADIAGLCAYTDQVSHP-WMSPAGYRR-GQIRNCIKLAIEPKQSMRDTMYQVAINPVTGFAG-GDGFVLFGDKMATQV 546 (663) Q Consensus 470 p~s~~~AG~~a~~d~~~g~-~~span~~~-~~i~~~~~~~~~~~~~~~~~Ln~~~in~i~~~~~-~~G~~~wG~rT~~~~ 546 (663) .+.+.+.|..+.+|-++-. -..-..|.+ .++ ....++..|.+.|..+|+|++..|.+ ...+.+|-.-++++ T Consensus 294 ~~~aa~~g~~as~nf~~~~g~~T~~fkq~~~Gv-----~a~~l~~t~a~al~~~~~N~y~~~~~~~~~~~~~~~G~~sG- 367 (501) T protein:vir:78 294 ATAGAVMGYAASINFQLRNGRTVLAFRQFNAGV-----PATAHDLGTANALRSNNYTYIGAYANAANNYTIAYDGKLSG- 367 (501) T ss_pred chHHHHHHHHHhcCcccCcceeeeeccccCCCc-----CcccCCHHHHHHHHhcCCeEEEEEecccceeeEEEcCeeec- Confidence 2346677888887754321 011112321 122 12456889999999999999988864 23477885555665 Q ss_pred CccceeeehhhHHHHHHHHHHHHHHHhhc----ccCCHHHHHHHHHHHHHHHHHHHhcCceE------------------ Q lcl|Aclame:pro 547 PSPFDRINVRRLFNMLKKNIGDTSKYELF----ENNDAFTRQSFRMETSQYLDGIRSLGGCY------------------ 604 (663) Q Consensus 547 ~~~~~~i~vrR~~~~i~~~~~~~~~~~v~----epn~~~~~~~v~~~i~~~L~~l~~~gal~------------------ 604 (663) +|.+|.+-+-.+|++..++..+....- =|-++.=...|+..|+.-|++-+++|.|. T Consensus 368 --~~~wiD~~~~~~Wl~~~iq~~l~~ll~~~~kIPyt~~G~~~l~a~v~~~l~~av~nG~I~~Gv~l~~~q~~~I~~~~g 445 (501) T protein:vir:78 368 --KFLWVDTYLDQIYLNAELQRAEFEAMLAYNSLPYNEDGYTALYRAGVDVIDAAVTSGIIRAGVTLTNSQLQQIDAAAG 445 (501) T ss_pred --cceeehhhhhHHHHHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHHHHHHHHHhCceeecCCCCCCccceeeccccC Confidence 367788888888888888888876443 34577778889999999999999999882 Q ss_pred -----------EEEEEEccCCCC-HHHhhCCEEEEEEEEEecCcceEEEEEEEEeecccchhhhh Q lcl|Aclame:pro 605 -----------DFRVVCDTTNNT-PNVIDRNEFVGTIYVKPPRSINYITLNMVATSTGANFDELI 657 (663) Q Consensus 605 -----------g~~v~~d~~~nt-~~~i~~G~~~~~i~~~p~~p~e~i~~~~~~~~~~~~~~e~~ 657 (663) ||.+.++....+ +....+.-..+.+.++---.+++|.+-. .||| T Consensus 446 ~~~~~~~~~~~Gyy~~~~~~~~~~~~R~~R~~p~~~~~y~~~gaIh~v~i~s---------~~v~ 501 (501) T protein:vir:78 446 VAGAGQLVQMRGWYFLIGDPANPGQARQNRTTPTCTLWYSDGGSIQELTIGS---------NAVI 501 (501) T ss_pred ccccccceeccceEEeeccccCChhhhhhcccCcEEEEEEeCCceeEEEeee---------eecC Confidence 377777744333 3334445557777777777888887632 2333 Done!