Query lcl|Aclame:protein:vir:105573|NCBI_annot:hypothetical protein|genbank:acc:YP_164310;genbank:gi:56692957;genbank:GeneID:3197184 Match_columns 225 No_of_seqs 65 out of 76 Neff 6.4 Searched_HMMs 1612 Date Sun Dec 1 02:32:08 2013 Command /home/guerois/workspace/virfam/python/lib/hhsearch//hhsearch2 -i .//seq/seq_13 -d /home/guerois/workspace/virfam/python/profile_database/capsid_neck_tail.hhm -glob -cpu 7 -o .//seq/HHR/seq_13_vs_rec_db.hhr No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM 1 protein:vir:105573 Length: 225 100.0 1.5E-93 9.4E-97 529.4 21.7 225 1-225 1-225 (225) 2 protein:vir:823 Length: 216 # 100.0 1.2E-76 7.7E-80 436.7 20.7 212 1-223 2-216 (216) 3 protein:vir:2779 Length: 216 # 100.0 1.2E-76 7.7E-80 436.7 20.7 212 1-223 2-216 (216) 4 protein:vir:3302 Length: 216 # 100.0 1.2E-76 7.7E-80 436.7 20.7 212 1-223 2-216 (216) 5 protein:vir:5111 Length: 234 # 100.0 1.5E-70 9.1E-74 403.4 17.8 210 1-218 2-234 (234) 6 protein:vir:93692 Length: 197 100.0 2.4E-58 1.5E-61 336.4 12.0 188 1-217 3-197 (197) 7 protein:vir:10130 Length: 223 99.5 2.5E-15 1.5E-18 100.7 15.8 175 1-224 38-223 (223) 8 protein:vir:9964 Length: 223 # 99.5 2.5E-15 1.5E-18 100.7 15.8 175 1-224 38-223 (223) 9 protein:vir:104383 Length: 166 99.1 2.2E-12 1.3E-15 84.5 13.1 155 27-224 1-166 (166) 10 protein:vir:8841 Length: 208 # 99.1 9.5E-12 5.9E-15 81.0 14.6 204 1-225 5-208 (208) 11 protein:vir:95880 Length: 236 97.1 3.3E-05 2E-08 45.2 11.5 203 1-225 2-236 (236) 12 protein:vir:108311 Length: 249 94.2 0.005 3.1E-06 33.2 16.7 200 1-225 3-232 (249) 13 protein:vir:94601 Length: 211 74.1 0.16 0.0001 24.9 10.1 201 1-225 1-210 (211) 14 protein:vir:351 Length: 242 # 66.4 0.27 0.00017 23.7 16.4 199 1-225 4-226 (242) 15 protein:vir:80185 Length: 221 56.4 0.46 0.00028 22.4 8.3 202 1-225 1-217 (221) No 1 >protein:vir:105573 Length: 225 # NCBI annotation: hypothetical protein # Family: family:all:1423 # MgeID: mge:1540 # MgeName: F116 # Cross-refs: genbank:acc:YP_164310;genbank:gi:56692957;genbank:GeneID:3197184 Probab=100.00 E-value=1.5e-93 Score=529.45 Aligned_cols=225 Identities=100% Similarity=1.530 Sum_probs=222.8 Q ss_pred CCHHHHHHHHHHhhccccCCccCChHHHHHHHHHHHHHHHHhhcccccccCcceeeeeecCCcccccCcchhheeheeee Q lcl|Aclame:pro 1 MTLADLIRRVRTDANDMVEPYFWSDQDVADWLNDAVREAAVRGRLIHESQADAVCRIEVVAGTAVYQLHASLYELSHLGF 80 (225) Q Consensus 1 mt~~~lI~r~r~~l~D~~~~~rW~~~el~~wlNdA~~e~~~r~rl~rpda~~~~~~i~~~aGt~q~~~~~~~~~I~~~~~ 80 (225) ||+++||+|||++|+|+++|||||++||++|||||++|||+|+||+|||+++++++|+|++||.|++|++.+|+|++++| T Consensus 1 m~~~~lI~r~~~~l~D~~~~~rW~~~el~~~lNdAv~e~~~r~rL~rpda~~~~~~i~l~~Gt~q~~~~~~~~~I~~~~~ 80 (225) T protein:vir:10 1 MTLADLIRRVRTDANDMVEPYFWSDQDVADWLNDAVREAAVRGRLIHESQADAVCRIEVVAGTAVYQLHASLYELSHLGF 80 (225) T ss_pred CCHHHHHHHHHHHhccccccccCChHHHHHHHHHHHHHHHHhcccccccCCCceeeeeecCccccccCchHHHHHHHHhh Confidence 99999999999999999889999999999999999999999999999999999999999999999999999999999999 Q ss_pred cCCCCCCCccceeccHHHHhhcCCCCcCCCCceEEEEeCCceEEEEecCCCCceEEEEEEeecccccccCCCccccCCcc Q lcl|Aclame:pro 81 YPADMSRPTMPVLKSAEVLDVELPEWRACTGKPLYAIQGDTSLRLVPTPDRAGILRVEGYRTPLADMALADKDTAQPEIH 160 (225) Q Consensus 81 ~~~~~~~~~~~~~vs~e~LD~~~p~W~~~~g~p~~~~~~~~~~~l~P~p~~~g~l~l~~~r~pl~~~~~~~~d~~~p~i~ 160 (225) .++++.++++++++|+|+||+++|+||+.+|.|+|++++++++||||+|+++|+|+|++||+|+++++.+++|++.|+|+ T Consensus 81 ~~~~~~~~~~~~~~s~e~LD~~~P~W~~~tg~p~~~~~d~~~~~l~P~p~~~~~vel~~~r~P~~~~~~~~~D~~~p~i~ 160 (225) T protein:vir:10 81 YPADMSRPTMPVLKSAEVLDVELPEWRACTGKPLYAIQGDTSLRLVPTPDRAGILRVEGYRTPLADMALADKDTAQPEIH 160 (225) T ss_pred cCcccCCceecccccHHHhcccCCCcccCCCCceEEEeCCcEEEEEecCCCceEEEEEEEeecchhhhccccccccCccc Confidence 99999999999999999999999999999999999999999999999999999999999999999999988899999999 Q ss_pred hhHHHHHHHHHHHHHhcCcCccccCHHHHHHHHHHHHHHhCCchHHHHHHHhcCCCCccccCCCC Q lcl|Aclame:pro 161 AEHHRHLVQWALYRGFSIPDMESFDPNRAALAEAAFTAYFGERPDSDLRRITREDVPHHVEAFWP 225 (225) Q Consensus 161 ~~~~~~Lv~w~lyra~s~d~~~~~n~~rA~~h~q~F~~~lG~k~~~d~~r~~R~~~~~~~~~~~~ 225 (225) ++||++|+|||||||||||+++++|++||++|||+|++|||+|+++|++|.+|+|+||+|++||| T Consensus 161 ~~y~~~Lvdw~lyRa~skd~~~~~d~~rA~~h~q~F~~alG~k~~ad~~r~~r~~~p~~~~~~~~ 225 (225) T protein:vir:10 161 AEHHRHLVQWALYRGFSIPDMESFDPNRAALAEAAFTAYFGERPDSDLRRITREDVPHHVEAFWP 225 (225) T ss_pred hhhHHHHHHHHHHHHhcCcCccccChHHHHHHHHHHHHHhCCchhHHHHHhccccCcccccccCC Confidence 99999999999999999999999999999999999999999999999999999999999999999 No 2 >protein:vir:823 Length: 216 # NCBI annotation: hypothetical protein # Family: family:all:1423 # MgeID: mge:16 # MgeName: VT2-Sa # Cross-refs: genbank:acc:NP_050556;genbank:gi:9633453;genbank:GeneID:1262282 Probab=100.00 E-value=1.2e-76 Score=436.74 Aligned_cols=212 Identities=25% Similarity=0.335 Sum_probs=197.2 Q ss_pred CCHHHHHHHHHHhhccccCCccCChHHHHHHHHHHHHHHHHhhcccccccCcceeeeeecCCcccccCcchhheeheeee Q lcl|Aclame:pro 1 MTLADLIRRVRTDANDMVEPYFWSDQDVADWLNDAVREAAVRGRLIHESQADAVCRIEVVAGTAVYQLHASLYELSHLGF 80 (225) Q Consensus 1 mt~~~lI~r~r~~l~D~~~~~rW~~~el~~wlNdA~~e~~~r~rl~rpda~~~~~~i~~~aGt~q~~~~~~~~~I~~~~~ 80 (225) +|+++||+|||++|+|+ .+|||+++||++|||||++|+|+| |||+++++++|+|++||.|++|++.+++|++++| T Consensus 2 ~t~~~lI~r~~~~l~D~-~~~rW~~~el~~~lNdAv~e~~l~----rpda~~~~~~i~l~~Gt~q~~p~~~~~lI~v~r~ 76 (216) T protein:vir:82 2 TTITEIIGRVNTQLVDP-MMVRWPLQELCDYYNDAVRAVILA----RPDAGASLETISCVPGARQVLPDGVIQLLDVICL 76 (216) T ss_pred ccHHHHHHHHHHhhhcc-cccccChHHHHHHHHHHHHHHHhh----cCCCCcceeeEeccccccccccchhhhhhhhhhh Confidence 89999999999999996 699999999999999999999988 8999999999999999999999999999999998 Q ss_pred cCCCCCCCccceeccHHHHhhcCCCCcCCCCceEEEEeCC---ceEEEEecCCCCceEEEEEEeecccccccCCCccccC Q lcl|Aclame:pro 81 YPADMSRPTMPVLKSAEVLDVELPEWRACTGKPLYAIQGD---TSLRLVPTPDRAGILRVEGYRTPLADMALADKDTAQP 157 (225) Q Consensus 81 ~~~~~~~~~~~~~vs~e~LD~~~p~W~~~~g~p~~~~~~~---~~~~l~P~p~~~g~l~l~~~r~pl~~~~~~~~d~~~p 157 (225) .+ ++++++||+|+||+++|+||+.+|.|+++++++ +.|||||+|+++|+|++++||+|+++.+.+++|++.+ T Consensus 77 ~~-----g~a~~~vsre~LD~~~P~W~~~~g~p~~~i~de~~pr~f~l~P~p~~~~~vel~~~r~P~a~~~~~~~dd~~~ 151 (216) T protein:vir:82 77 SD-----GSAVRPLSREVLDAQYPEWPTMKGIPECFISNDLSPRVFWLFPAPDKEISIDAVVSRIPEAVYVLTQDDDTPV 151 (216) T ss_pred CC-----CCceeeecHHHhcccCCCcCCCCCCceEEEecCCCceEEEEeccCCCCcEEEEEEEecCcchhhccCCCCCCC Confidence 43 466889999999999999999999999888855 6778999999999999999999998888777777677 Q ss_pred CcchhHHHHHHHHHHHHHhcCcCccccCHHHHHHHHHHHHHHhCCchHHHHHHHhcCCCCccccCC Q lcl|Aclame:pro 158 EIHAEHHRHLVQWALYRGFSIPDMESFDPNRAALAEAAFTAYFGERPDSDLRRITREDVPHHVEAF 223 (225) Q Consensus 158 ~i~~~~~~~Lv~w~lyra~s~d~~~~~n~~rA~~h~q~F~~~lG~k~~~d~~r~~R~~~~~~~~~~ 223 (225) +|+++||++|+|||||||||||+++++|++||++|||+|++|||+|+++|++|++|.+..... +. T Consensus 152 ~i~~~y~~~Lvdw~lyRa~skd~~~~~d~~rA~~h~q~F~~~lG~k~~ad~~~~~r~~~~~~~-~~ 216 (216) T protein:vir:82 152 PLEEAYVNPLVEWMLFRAFSKDAAGGAESGLAAQHYQSFVEQLGIKQGADSALYARKKVFNGG-GV 216 (216) T ss_pred CcchhhhHHHHHHHHHHHhcCcCccccChHHHHHHHHHHHHHhCCchHHHhHHHHHHhhccCC-CC Confidence 999999999999999999999999999999999999999999999999999999999765554 33 No 3 >protein:vir:2779 Length: 216 # NCBI annotation: hypothetical protein # Family: family:all:1423 # MgeID: mge:59 # MgeName: Stx2 converting bacteriophage I # Cross-refs: genbank:acc:NP_612896;genbank:gi:20065813;genbank:GeneID:935638 Probab=100.00 E-value=1.2e-76 Score=436.74 Aligned_cols=212 Identities=25% Similarity=0.335 Sum_probs=197.2 Q ss_pred CCHHHHHHHHHHhhccccCCccCChHHHHHHHHHHHHHHHHhhcccccccCcceeeeeecCCcccccCcchhheeheeee Q lcl|Aclame:pro 1 MTLADLIRRVRTDANDMVEPYFWSDQDVADWLNDAVREAAVRGRLIHESQADAVCRIEVVAGTAVYQLHASLYELSHLGF 80 (225) Q Consensus 1 mt~~~lI~r~r~~l~D~~~~~rW~~~el~~wlNdA~~e~~~r~rl~rpda~~~~~~i~~~aGt~q~~~~~~~~~I~~~~~ 80 (225) +|+++||+|||++|+|+ .+|||+++||++|||||++|+|+| |||+++++++|+|++||.|++|++.+++|++++| T Consensus 2 ~t~~~lI~r~~~~l~D~-~~~rW~~~el~~~lNdAv~e~~l~----rpda~~~~~~i~l~~Gt~q~~p~~~~~lI~v~r~ 76 (216) T protein:vir:27 2 TTITEIIGRVNTQLVDP-MMVRWPLQELCDYYNDAVRAVILA----RPDAGASLETISCVPGARQVLPDGVIQLLDVICL 76 (216) T ss_pred ccHHHHHHHHHHhhhcc-cccccChHHHHHHHHHHHHHHHhh----cCCCCcceeeEeccccccccccchhhhhhhhhhh Confidence 89999999999999996 699999999999999999999988 8999999999999999999999999999999998 Q ss_pred cCCCCCCCccceeccHHHHhhcCCCCcCCCCceEEEEeCC---ceEEEEecCCCCceEEEEEEeecccccccCCCccccC Q lcl|Aclame:pro 81 YPADMSRPTMPVLKSAEVLDVELPEWRACTGKPLYAIQGD---TSLRLVPTPDRAGILRVEGYRTPLADMALADKDTAQP 157 (225) Q Consensus 81 ~~~~~~~~~~~~~vs~e~LD~~~p~W~~~~g~p~~~~~~~---~~~~l~P~p~~~g~l~l~~~r~pl~~~~~~~~d~~~p 157 (225) .+ ++++++||+|+||+++|+||+.+|.|+++++++ +.|||||+|+++|+|++++||+|+++.+.+++|++.+ T Consensus 77 ~~-----g~a~~~vsre~LD~~~P~W~~~~g~p~~~i~de~~pr~f~l~P~p~~~~~vel~~~r~P~a~~~~~~~dd~~~ 151 (216) T protein:vir:27 77 SD-----GSAVRPLSREVLDAQYPEWPTMKGIPECFISNDLSPRVFWLFPAPDKEISIDAVVSRIPEAVYVLTQDDDTPV 151 (216) T ss_pred CC-----CCceeeecHHHhcccCCCcCCCCCCceEEEecCCCceEEEEeccCCCCcEEEEEEEecCcchhhccCCCCCCC Confidence 43 466889999999999999999999999888855 6778999999999999999999998888777777677 Q ss_pred CcchhHHHHHHHHHHHHHhcCcCccccCHHHHHHHHHHHHHHhCCchHHHHHHHhcCCCCccccCC Q lcl|Aclame:pro 158 EIHAEHHRHLVQWALYRGFSIPDMESFDPNRAALAEAAFTAYFGERPDSDLRRITREDVPHHVEAF 223 (225) Q Consensus 158 ~i~~~~~~~Lv~w~lyra~s~d~~~~~n~~rA~~h~q~F~~~lG~k~~~d~~r~~R~~~~~~~~~~ 223 (225) +|+++||++|+|||||||||||+++++|++||++|||+|++|||+|+++|++|++|.+..... +. T Consensus 152 ~i~~~y~~~Lvdw~lyRa~skd~~~~~d~~rA~~h~q~F~~~lG~k~~ad~~~~~r~~~~~~~-~~ 216 (216) T protein:vir:27 152 PLEEAYVNPLVEWMLFRAFSKDAAGGAESGLAAQHYQSFVEQLGIKQGADSALYARKKVFNGG-GV 216 (216) T ss_pred CcchhhhHHHHHHHHHHHhcCcCccccChHHHHHHHHHHHHHhCCchHHHhHHHHHHhhccCC-CC Confidence 999999999999999999999999999999999999999999999999999999999765554 33 No 4 >protein:vir:3302 Length: 216 # NCBI annotation: hypothetical protein # Family: family:all:1423 # MgeID: mge:66 # MgeName: 933W # Cross-refs: genbank:acc:NP_049518;genbank:gi:9632524;genbank:GeneID:1262013 Probab=100.00 E-value=1.2e-76 Score=436.74 Aligned_cols=212 Identities=25% Similarity=0.335 Sum_probs=197.2 Q ss_pred CCHHHHHHHHHHhhccccCCccCChHHHHHHHHHHHHHHHHhhcccccccCcceeeeeecCCcccccCcchhheeheeee Q lcl|Aclame:pro 1 MTLADLIRRVRTDANDMVEPYFWSDQDVADWLNDAVREAAVRGRLIHESQADAVCRIEVVAGTAVYQLHASLYELSHLGF 80 (225) Q Consensus 1 mt~~~lI~r~r~~l~D~~~~~rW~~~el~~wlNdA~~e~~~r~rl~rpda~~~~~~i~~~aGt~q~~~~~~~~~I~~~~~ 80 (225) +|+++||+|||++|+|+ .+|||+++||++|||||++|+|+| |||+++++++|+|++||.|++|++.+++|++++| T Consensus 2 ~t~~~lI~r~~~~l~D~-~~~rW~~~el~~~lNdAv~e~~l~----rpda~~~~~~i~l~~Gt~q~~p~~~~~lI~v~r~ 76 (216) T protein:vir:33 2 TTITEIIGRVNTQLVDP-MMVRWPLQELCDYYNDAVRAVILA----RPDAGASLETISCVPGARQVLPDGVIQLLDVICL 76 (216) T ss_pred ccHHHHHHHHHHhhhcc-cccccChHHHHHHHHHHHHHHHhh----cCCCCcceeeEeccccccccccchhhhhhhhhhh Confidence 89999999999999996 699999999999999999999988 8999999999999999999999999999999998 Q ss_pred cCCCCCCCccceeccHHHHhhcCCCCcCCCCceEEEEeCC---ceEEEEecCCCCceEEEEEEeecccccccCCCccccC Q lcl|Aclame:pro 81 YPADMSRPTMPVLKSAEVLDVELPEWRACTGKPLYAIQGD---TSLRLVPTPDRAGILRVEGYRTPLADMALADKDTAQP 157 (225) Q Consensus 81 ~~~~~~~~~~~~~vs~e~LD~~~p~W~~~~g~p~~~~~~~---~~~~l~P~p~~~g~l~l~~~r~pl~~~~~~~~d~~~p 157 (225) .+ ++++++||+|+||+++|+||+.+|.|+++++++ +.|||||+|+++|+|++++||+|+++.+.+++|++.+ T Consensus 77 ~~-----g~a~~~vsre~LD~~~P~W~~~~g~p~~~i~de~~pr~f~l~P~p~~~~~vel~~~r~P~a~~~~~~~dd~~~ 151 (216) T protein:vir:33 77 SD-----GSAVRPLSREVLDAQYPEWPTMKGIPECFISNDLSPRVFWLFPAPDKEISIDAVVSRIPEAVYVLTQDDDTPV 151 (216) T ss_pred CC-----CCceeeecHHHhcccCCCcCCCCCCceEEEecCCCceEEEEeccCCCCcEEEEEEEecCcchhhccCCCCCCC Confidence 43 466889999999999999999999999888855 6778999999999999999999998888777777677 Q ss_pred CcchhHHHHHHHHHHHHHhcCcCccccCHHHHHHHHHHHHHHhCCchHHHHHHHhcCCCCccccCC Q lcl|Aclame:pro 158 EIHAEHHRHLVQWALYRGFSIPDMESFDPNRAALAEAAFTAYFGERPDSDLRRITREDVPHHVEAF 223 (225) Q Consensus 158 ~i~~~~~~~Lv~w~lyra~s~d~~~~~n~~rA~~h~q~F~~~lG~k~~~d~~r~~R~~~~~~~~~~ 223 (225) +|+++||++|+|||||||||||+++++|++||++|||+|++|||+|+++|++|++|.+..... +. T Consensus 152 ~i~~~y~~~Lvdw~lyRa~skd~~~~~d~~rA~~h~q~F~~~lG~k~~ad~~~~~r~~~~~~~-~~ 216 (216) T protein:vir:33 152 PLEEAYVNPLVEWMLFRAFSKDAAGGAESGLAAQHYQSFVEQLGIKQGADSALYARKKVFNGG-GV 216 (216) T ss_pred CcchhhhHHHHHHHHHHHhcCcCccccChHHHHHHHHHHHHHhCCchHHHhHHHHHHhhccCC-CC Confidence 999999999999999999999999999999999999999999999999999999999765554 33 No 5 >protein:vir:5111 Length: 234 # NCBI annotation: unknown # Family: family:all:1423 # MgeID: mge:114 # MgeName: PBC5 # Cross-refs: genbank:acc:NP_542268;genbank:gi:18071240;genbank:GeneID:929347 Probab=100.00 E-value=1.5e-70 Score=403.43 Aligned_cols=210 Identities=17% Similarity=0.204 Sum_probs=180.8 Q ss_pred CCHHHHHHHHHHhhccccCCccCChHHHHHHHHHHHHHHHHhhcccccccCcceeeeeecCCcccccCcc-----hhhee Q lcl|Aclame:pro 1 MTLADLIRRVRTDANDMVEPYFWSDQDVADWLNDAVREAAVRGRLIHESQADAVCRIEVVAGTAVYQLHA-----SLYEL 75 (225) Q Consensus 1 mt~~~lI~r~r~~l~D~~~~~rW~~~el~~wlNdA~~e~~~r~rl~rpda~~~~~~i~~~aGt~q~~~~~-----~~~~I 75 (225) +|+++||+|||++|+|+ ++|||+++||++|||||++|+|+| |||+++++++|.|++||+|.+|.. .+.+| T Consensus 2 ~t~~~lI~r~~~~l~D~-~~~rW~~~el~~~lNdAv~e~~l~----rp~a~~~~~~i~l~~Gt~q~lP~d~~~~~~l~li 76 (234) T protein:vir:51 2 PKASEIMRLAGIQLLDE-DHIRWPLIELADWVNEGVKAIVLA----KPSASSKSAAIQLVKGTHQTLPGTIDGKATLQLI 76 (234) T ss_pred ccHHHHHHHHHHHhccc-cccccChHHHHHHHHHHHHHHHhh----cCCCCccceeEeeccCCccccccccccchheehh Confidence 89999999999999995 899999999999999999999987 999999999999999999999853 67778 Q ss_pred heeeecCCCC---CCCccceeccHHHHhhcCCCCcCCCCce--------EEEEeCCceEEEEecCCCCceEEEEEEeecc Q lcl|Aclame:pro 76 SHLGFYPADM---SRPTMPVLKSAEVLDVELPEWRACTGKP--------LYAIQGDTSLRLVPTPDRAGILRVEGYRTPL 144 (225) Q Consensus 76 ~~~~~~~~~~---~~~~~~~~vs~e~LD~~~p~W~~~~g~p--------~~~~~~~~~~~l~P~p~~~g~l~l~~~r~pl 144 (225) +++++...++ ..++++++||+|+||+++|+||+.+|.| .|+.++++.|||||+|+++|+|++++||+|. T Consensus 77 ~i~rn~~s~~~~~~~grav~~vsre~LD~~~P~W~~~tg~P~~~~v~~y~~d~~~p~~~~l~P~p~~~g~v~~~~~r~P~ 156 (234) T protein:vir:51 77 GINRNLVSAAEPRQGLRAIRTCARDVLDAQEPNWHTASYVPFRKEVRQVIYDENLPTEFYVYPGNDGSGFVEAAFSFLPT 156 (234) T ss_pred hhhhhhccccccccCcceeeecCHHHhcccCCCccccCCCCchhhhhhhhccCCCCeEEEEeccCCCCceEEEEEEeecc Confidence 8887543322 2358899999999999999999999987 4677789999999999999999999999996 Q ss_pred cccccCCC-------ccccCCcchhHHHHHHHHHHHHHhcCcCccccCHHHHHHHHHHHHHHhCCchHHHHHHHhcCCCC Q lcl|Aclame:pro 145 ADMALADK-------DTAQPEIHAEHHRHLVQWALYRGFSIPDMESFDPNRAALAEAAFTAYFGERPDSDLRRITREDVP 217 (225) Q Consensus 145 ~~~~~~~~-------d~~~p~i~~~~~~~Lv~w~lyra~s~d~~~~~n~~rA~~h~q~F~~~lG~k~~~d~~r~~R~~~~ 217 (225) +.....+. +++.|+|+++||++|+||||||||||| ++++|++||++|||+|++|||+|+++|.. ...+.. T Consensus 157 ~v~~~~~~d~~~~a~~~~~~~i~~~y~~~Lvdw~lyRa~skD-~e~~d~~rA~~h~q~F~~~lG~k~~~d~~--~~pn~r 233 (234) T protein:vir:51 157 SVKVANGADPEKIASWDIDVGLPEPYSVPLLDYVLYRCHQKD-DTAADLGKATSHYQLFATAVGIKVQSEGT--SNPNRR 233 (234) T ss_pred hhhhhhcCCccccccccccCCccchhhHHHHHHHhhhhcCcc-ccccchHHHHHHHHHHHHHhCCcchhhhh--cccccc Confidence 53222222 234689999999999999999999996 57999999999999999999999999943 233333 Q ss_pred c Q lcl|Aclame:pro 218 H 218 (225) Q Consensus 218 ~ 218 (225) + T Consensus 234 ~ 234 (234) T protein:vir:51 234 R 234 (234) T ss_pred C Confidence 3 No 6 >protein:vir:93692 Length: 197 # NCBI annotation: Bcep22gp58 # Family: family:all:1423 # MgeID: mge:1470 # MgeName: Bcep22 # Cross-refs: genbank:acc:NP_944287;genbank:gi:38640364;genbank:GeneID:2658345 Probab=100.00 E-value=2.4e-58 Score=336.45 Aligned_cols=188 Identities=21% Similarity=0.243 Sum_probs=160.5 Q ss_pred CCHHHHHHHHHHhhccccCCccCChHHHHHHHHHHHHHHHHhhcccccccCcceeeeeecCCcccccCcchhheeheeee Q lcl|Aclame:pro 1 MTLADLIRRVRTDANDMVEPYFWSDQDVADWLNDAVREAAVRGRLIHESQADAVCRIEVVAGTAVYQLHASLYELSHLGF 80 (225) Q Consensus 1 mt~~~lI~r~r~~l~D~~~~~rW~~~el~~wlNdA~~e~~~r~rl~rpda~~~~~~i~~~aGt~q~~~~~~~~~I~~~~~ 80 (225) ||+++||+|||++|+|+ ++|||+++||++|||||++|+|+| |||+++++++|+|++||+|.+|.+.+.+|+++++ T Consensus 3 ~t~~~lI~r~~~~L~D~-~~~rW~~~el~dwlNdAv~ei~l~----rPda~~~~~~i~l~aGt~q~LP~~~~~Li~vvrn 77 (197) T protein:vir:93 3 IAATDLIARAGNVLQDE-DHIRWEVPELIEWINDAARETIVR----RPAARSVAAVLELAAGTRQAIPERGVELLDVVRN 77 (197) T ss_pred ccHHHHHHHHHHhhccc-cccccCcHHHHHHHHHHHHHHHhh----CCCCCcceeEEeeccCcccccchhHHHHHHHHHh Confidence 99999999999999995 899999999999999999999998 9999999999999999999999999999999987 Q ss_pred cCCCC-CCCccceeccHHHHhhcCCCCcCC--CCceE---EEEeCCceEEEEecCCCCceEEEEEEeecccccccCCCcc Q lcl|Aclame:pro 81 YPADM-SRPTMPVLKSAEVLDVELPEWRAC--TGKPL---YAIQGDTSLRLVPTPDRAGILRVEGYRTPLADMALADKDT 154 (225) Q Consensus 81 ~~~~~-~~~~~~~~vs~e~LD~~~p~W~~~--~g~p~---~~~~~~~~~~l~P~p~~~g~l~l~~~r~pl~~~~~~~~d~ 154 (225) .+..+ ..++.+++||+|+||+++|+||.. +|.++ |..+++++|||||+|+++|.|++++|++|++..+. + T Consensus 78 ~~~~~~~~gr~vr~vsre~LD~~~P~W~~~~~~~~v~~y~~~e~~p~~~~vyP~p~~~~~ve~~~~r~P~~v~~~----~ 153 (197) T protein:vir:93 78 MGADGVTPGRIVRRVDRQLLDDQNPDWHAARAKNVVKHFTFDERAPRIFYVYPPAVAGTKVETLHSELPPAIAAS----G 153 (197) T ss_pred hhhcccCCCcccccccHHHhcccCCCCccCCCCCceEEEEeecCCCcEEEEeecCCCCceEEEEEeeCChhhhcc----C Confidence 65443 457789999999999999999965 55554 66779999999999999999999999999766543 3 Q ss_pred ccCCcchhHHHHHHH-HHHHHHhcCcCccccCHHHHHHHHHHHHHHhCCchHHHHHHHhcCCCC Q lcl|Aclame:pro 155 AQPEIHAEHHRHLVQ-WALYRGFSIPDMESFDPNRAALAEAAFTAYFGERPDSDLRRITREDVP 217 (225) Q Consensus 155 ~~p~i~~~~~~~Lv~-w~lyra~s~d~~~~~n~~rA~~h~q~F~~~lG~k~~~d~~r~~R~~~~ 217 (225) +.++|+++|+++||| ||||||||||++.++|+---. ++| ...| T Consensus 154 ~~~~ipeiy~~~lv~~~~lyRa~sKd~~~~a~a~~~~-----------------~~~---~~~~ 197 (197) T protein:vir:93 154 DTLDMGAEYMNVLVSTSATARCRRTASSRTARSPPCT-----------------IRR---SSTP 197 (197) T ss_pred CCCCCchhhhhhhHHhhhhhhhcCCCCCCcccCCccc-----------------ccc---CCCC Confidence 346789999999997 999999999988776543211 111 1112 No 7 >protein:vir:10130 Length: 223 # NCBI annotation: hypothetical protein # Family: family:all:2410 # MgeID: mge:180 # MgeName: Stx2 converting bacteriophage II # Cross-refs: genbank:acc:NP_859260;genbank:gi:32171016;genbank:GeneID:2653415 Probab=99.47 E-value=2.5e-15 Score=100.67 Aligned_cols=175 Identities=19% Similarity=0.185 Sum_probs=125.5 Q ss_pred CCHHHHHHHHHHhhccccCCccCChHHHHHHHHHHHHHHHHhhcccccccCcceeeeeecCCcccccC----cchhheeh Q lcl|Aclame:pro 1 MTLADLIRRVRTDANDMVEPYFWSDQDVADWLNDAVREAAVRGRLIHESQADAVCRIEVVAGTAVYQL----HASLYELS 76 (225) Q Consensus 1 mt~~~lI~r~r~~l~D~~~~~rW~~~el~~wlNdA~~e~~~r~rl~rpda~~~~~~i~~~aGt~q~~~----~~~~~~I~ 76 (225) .++++++-.+|....-. ++..+.+-|+.|..|+|.+++++|.. .++..++|..-+.. +..++.|. T Consensus 38 v~~d~fLP~Vr~~vp~~------l~~~~~~aLr~AAieFCReS~~~R~t-----~~~~~~~~~~~~~~~~~~~~~~~rI~ 106 (223) T protein:vir:10 38 AELSDFLPYVRRHISGP------LNIMMTDALSMAAVAFSRQSLVCRRE-----VTVVPVAGKEIVLPYDKDDEECVHII 106 (223) T ss_pred ccHHHHHHHHhhhCCCc------hhHHHHHHHHHHHHHHHhhccceeec-----ccccCCCCcceEEeeccccccceeeE Confidence 57899999998887764 56788999999999999999999965 34444444322211 22455666 Q ss_pred eeeecCCCCCCCccceeccHHHHhhcCCCCcCCCCceEEEEeCCceEEEEecCCCCceEEEEEEeecccccccCCCcccc Q lcl|Aclame:pro 77 HLGFYPADMSRPTMPVLKSAEVLDVELPEWRACTGKPLYAIQGDTSLRLVPTPDRAGILRVEGYRTPLADMALADKDTAQ 156 (225) Q Consensus 77 ~~~~~~~~~~~~~~~~~vs~e~LD~~~p~W~~~~g~p~~~~~~~~~~~l~P~p~~~g~l~l~~~r~pl~~~~~~~~d~~~ 156 (225) .+..+|.. + | .|++ |....+++++++|.| |+|++-+. ++|.. +..+. T Consensus 107 ~v~~~g~~------L--------------~---~G~~-~t~~s~d~l~l~~~~---~tl~V~~a---lkPs~---~a~~l 153 (223) T protein:vir:10 107 RISDDNHE------L--------------F---VGRD-VDISSGRSLRFACSP---GEVSVLYA---VAPKA---GRSQI 153 (223) T ss_pred EeecCCee------e--------------e---cccc-eeecCCceEEEEeCC---CeEEEEEE---eccCc---chhhh Confidence 66544431 1 1 2444 566678899999977 56766554 34432 34556 Q ss_pred CCcchhHHHHHHHHHHHHHhcCcCccccCHHHHHHHHHHHHHHhCCchHHHHHHHhcCCC-------CccccCCC Q lcl|Aclame:pro 157 PEIHAEHHRHLVQWALYRGFSIPDMESFDPNRAALAEAAFTAYFGERPDSDLRRITREDV-------PHHVEAFW 224 (225) Q Consensus 157 p~i~~~~~~~Lv~w~lyra~s~d~~~~~n~~rA~~h~q~F~~~lG~k~~~d~~r~~R~~~-------~~~~~~~~ 224 (225) |+.-..|+.+|-+.|++|.|+.|+.++.||++|+.|.|+|.+.+ ..+.|..++.. |.+.+-|| T Consensus 154 PD~L~dy~eaI~~GA~arLlmmP~kpWsNP~lA~y~~~~F~eg~-----r~Akr~ale~~~~~~~~nP~R~~~FF 223 (223) T protein:vir:10 154 PDELLTWPEEVAAGALERLFMQTGVSWSDPLRAQYFSVQFSEGI-----RRAYRHTLATSPYSSYRNPVRRQRFF 223 (223) T ss_pred hHHHHHHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHH-----HHHHHHHHhhcCccccCCCccccccC Confidence 76445699999999999999999999999999999999999877 56667777744 44555677 No 8 >protein:vir:9964 Length: 223 # NCBI annotation: hypothetical protein # Family: family:all:2410 # MgeID: mge:179 # MgeName: Stx1 converting bacteriophage # Cross-refs: genbank:acc:NP_859094;genbank:gi:32170849;genbank:GeneID:2653173 Probab=99.47 E-value=2.5e-15 Score=100.67 Aligned_cols=175 Identities=19% Similarity=0.185 Sum_probs=125.5 Q ss_pred CCHHHHHHHHHHhhccccCCccCChHHHHHHHHHHHHHHHHhhcccccccCcceeeeeecCCcccccC----cchhheeh Q lcl|Aclame:pro 1 MTLADLIRRVRTDANDMVEPYFWSDQDVADWLNDAVREAAVRGRLIHESQADAVCRIEVVAGTAVYQL----HASLYELS 76 (225) Q Consensus 1 mt~~~lI~r~r~~l~D~~~~~rW~~~el~~wlNdA~~e~~~r~rl~rpda~~~~~~i~~~aGt~q~~~----~~~~~~I~ 76 (225) .++++++-.+|....-. ++..+.+-|+.|..|+|.+++++|.. .++..++|..-+.. +..++.|. T Consensus 38 v~~d~fLP~Vr~~vp~~------l~~~~~~aLr~AAieFCReS~~~R~t-----~~~~~~~~~~~~~~~~~~~~~~~rI~ 106 (223) T protein:vir:99 38 AELSDFLPYVRRHISGP------LNIMMTDALSMAAVAFSRQSLVCRRE-----VTVVPVAGKEIVLPYDKDDEECVHII 106 (223) T ss_pred ccHHHHHHHHhhhCCCc------hhHHHHHHHHHHHHHHHhhccceeec-----ccccCCCCcceEEeeccccccceeeE Confidence 57899999998887764 56788999999999999999999965 34444444322211 22455666 Q ss_pred eeeecCCCCCCCccceeccHHHHhhcCCCCcCCCCceEEEEeCCceEEEEecCCCCceEEEEEEeecccccccCCCcccc Q lcl|Aclame:pro 77 HLGFYPADMSRPTMPVLKSAEVLDVELPEWRACTGKPLYAIQGDTSLRLVPTPDRAGILRVEGYRTPLADMALADKDTAQ 156 (225) Q Consensus 77 ~~~~~~~~~~~~~~~~~vs~e~LD~~~p~W~~~~g~p~~~~~~~~~~~l~P~p~~~g~l~l~~~r~pl~~~~~~~~d~~~ 156 (225) .+..+|.. + | .|++ |....+++++++|.| |+|++-+. ++|.. +..+. T Consensus 107 ~v~~~g~~------L--------------~---~G~~-~t~~s~d~l~l~~~~---~tl~V~~a---lkPs~---~a~~l 153 (223) T protein:vir:99 107 RISDDNHE------L--------------F---VGRD-VDISSGRSLRFACSP---GEVSVLYA---VAPKA---GRSQI 153 (223) T ss_pred EeecCCee------e--------------e---cccc-eeecCCceEEEEeCC---CeEEEEEE---eccCc---chhhh Confidence 66544431 1 1 2444 566678899999977 56766554 34432 34556 Q ss_pred CCcchhHHHHHHHHHHHHHhcCcCccccCHHHHHHHHHHHHHHhCCchHHHHHHHhcCCC-------CccccCCC Q lcl|Aclame:pro 157 PEIHAEHHRHLVQWALYRGFSIPDMESFDPNRAALAEAAFTAYFGERPDSDLRRITREDV-------PHHVEAFW 224 (225) Q Consensus 157 p~i~~~~~~~Lv~w~lyra~s~d~~~~~n~~rA~~h~q~F~~~lG~k~~~d~~r~~R~~~-------~~~~~~~~ 224 (225) |+.-..|+.+|-+.|++|.|+.|+.++.||++|+.|.|+|.+.+ ..+.|..++.. |.+.+-|| T Consensus 154 PD~L~dy~eaI~~GA~arLlmmP~kpWsNP~lA~y~~~~F~eg~-----r~Akr~ale~~~~~~~~nP~R~~~FF 223 (223) T protein:vir:99 154 PDELLTWPEEVAAGALERLFMQTGVSWSDPLRAQYFSVQFSEGI-----RRAYRHTLATSPYSSYRNPVRRQRFF 223 (223) T ss_pred hHHHHHHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHH-----HHHHHHHHhhcCccccCCCccccccC Confidence 76445699999999999999999999999999999999999877 56667777744 44555677 No 9 >protein:vir:104383 Length: 166 # NCBI annotation: hypothetical protein # Family: family:all:2410 # MgeID: mge:1471 # MgeName: 86 # Cross-refs: genbank:acc:YP_794066;genbank:gi:116222011;genbank:GeneID:4397445 Probab=99.12 E-value=2.2e-12 Score=84.52 Aligned_cols=155 Identities=19% Similarity=0.141 Sum_probs=100.1 Q ss_pred HHHHHHHHHHHHHHHhhcccccccCcceeeeeecC-CcccccCc-c--hhheeheeeecCCCCCCCccceeccHHHHhhc Q lcl|Aclame:pro 27 DVADWLNDAVREAAVRGRLIHESQADAVCRIEVVA-GTAVYQLH-A--SLYELSHLGFYPADMSRPTMPVLKSAEVLDVE 102 (225) Q Consensus 27 el~~wlNdA~~e~~~r~rl~rpda~~~~~~i~~~a-Gt~q~~~~-~--~~~~I~~~~~~~~~~~~~~~~~~vs~e~LD~~ 102 (225) -+-+=|-+|..|+|..++++|..- ++..++ |+.-.... . .++.|..+..++ +.+ T Consensus 1 ~m~~Al~~AaieFCreS~~~r~t~-----t~~~~~~~~~v~~~~~~d~~~~~i~~v~~~~------~~L----------- 58 (166) T protein:vir:10 1 MMTDALSMAAVAFSRQSLVCRREV-----TVVPVAGKEIVLPYDKDDEECVHIIRISDDN------HEL----------- 58 (166) T ss_pred ChHHHHHHHHHHHHhhccceeeee-----cccccCCcceEEecCCccceeeeEEeeecCC------cee----------- Confidence 666778999999999999999864 332222 22211111 1 122222222111 111 Q ss_pred CCCCcCCCCceEEEEeCCceEEEEecCCCCceEEEEEEeecccccccCCCccccCCcchhHHHHHHHHHHHHHhcCcCcc Q lcl|Aclame:pro 103 LPEWRACTGKPLYAIQGDTSLRLVPTPDRAGILRVEGYRTPLADMALADKDTAQPEIHAEHHRHLVQWALYRGFSIPDME 182 (225) Q Consensus 103 ~p~W~~~~g~p~~~~~~~~~~~l~P~p~~~g~l~l~~~r~pl~~~~~~~~d~~~p~i~~~~~~~Lv~w~lyra~s~d~~~ 182 (225) -+|+. |....+++|+++|.| ++|.+.+.. +|.. +....|+....|..+|.+.|+++.|+.|+.+ T Consensus 59 ------~~g~~-~~~~s~~~L~~~~~~---~~l~V~~a~---~Ps~---~a~~lPd~L~dy~~aI~~GA~~~L~mmP~k~ 122 (166) T protein:vir:10 59 ------FVGRD-VDISSGRSLRFACSP---GEVSVLYAV---APKA---GRSQIPDELLTWPEEVAAGALERLFMQTGVS 122 (166) T ss_pred ------ecccc-ceecCCcEEEEecCC---CEEEEEEEe---ccCC---CCcccchHHhhHHHHHHHHHHHHHHhCCCCC Confidence 12333 566678999999999 356664433 4433 3455666555699999999999999999999 Q ss_pred ccCHHHHHHHHHHHHHHhCCchHHHHHHHhcCCC-------CccccCCC Q lcl|Aclame:pro 183 SFDPNRAALAEAAFTAYFGERPDSDLRRITREDV-------PHHVEAFW 224 (225) Q Consensus 183 ~~n~~rA~~h~q~F~~~lG~k~~~d~~r~~R~~~-------~~~~~~~~ 224 (225) +.||++|+.|.|+|.+.+ .-..|..++.. |.+.+-|| T Consensus 123 WsnP~la~y~~~~F~eg~-----r~A~r~a~e~~~~~~~~nP~R~~~Ff 166 (166) T protein:vir:10 123 WSDPLRAQYFSVQFSEGI-----RRAYRHTLATSPYSSYRNPARRQRFY 166 (166) T ss_pred CCChhhhHHHHHHHHHHH-----HHHHHHhhhhcCccccCCCccccccC Confidence 999999999999999776 34455555533 44445577 No 10 >protein:vir:8841 Length: 208 # NCBI annotation: constituent protein # Family: family:all:6621 # MgeID: mge:158 # MgeName: PaP3 # Cross-refs: genbank:acc:NP_775249;genbank:gi:27476047;genbank:GeneID:2700595 Probab=99.07 E-value=9.5e-12 Score=81.01 Aligned_cols=204 Identities=6% Similarity=0.003 Sum_probs=134.5 Q ss_pred CCHHHHHHHHHHhhccccCCccCChHHHHHHHHHHHHHHHHhhcccccccCcceeeeeecCCcccccCcchhheeheeee Q lcl|Aclame:pro 1 MTLADLIRRVRTDANDMVEPYFWSDQDVADWLNDAVREAAVRGRLIHESQADAVCRIEVVAGTAVYQLHASLYELSHLGF 80 (225) Q Consensus 1 mt~~~lI~r~r~~l~D~~~~~rW~~~el~~wlNdA~~e~~~r~rl~rpda~~~~~~i~~~aGt~q~~~~~~~~~I~~~~~ 80 (225) =+-++|...+..-++=. +- +.+-+-+||+-|..++-.. |-.+.. -+..++.+..|+. .+++...++..+.. T Consensus 5 ~~Y~~L~~~~~~~l~R~-Dl---t~~~~p~FI~lAE~~inr~--Lr~~~~-e~~vtl~~~~g~~--~LP~Df~e~r~i~~ 75 (208) T protein:vir:88 5 NNVTDLAIAAIQWSDRQ-DL---TQELLMLFIGNTTDRLNRL--LRVREN-EHFETLMAFGGGI--EIPEHFVALRSITG 75 (208) T ss_pred CCHHHHHHHHHHhhccc-cc---hhhhhhHHHHHHHHHHHHH--hccccc-ceEEEEEecCcee--eCChhHHHHHHHhh Confidence 57788888887655442 21 3344889999999999321 113332 3455667777764 45556676666654 Q ss_pred cCCCCCCCccceeccHHHHhhcCCCCcCCCCceEEEEeCCceEEEEecCCCCceEEEEEEeecccccccCCCccccCCcc Q lcl|Aclame:pro 81 YPADMSRPTMPVLKSAEVLDVELPEWRACTGKPLYAIQGDTSLRLVPTPDRAGILRVEGYRTPLADMALADKDTAQPEIH 160 (225) Q Consensus 81 ~~~~~~~~~~~~~vs~e~LD~~~p~W~~~~g~p~~~~~~~~~~~l~P~p~~~g~l~l~~~r~pl~~~~~~~~d~~~p~i~ 160 (225) +++..++.+..++.+.|+. +.+|+..+|+|.|+....+.++++|.|+++..++|.+|... .++ +++ .+.=-|- T Consensus 76 --~~~~~g~~l~~v~~~~~~~-~~~~~~~~g~p~~yti~g~~i~~~P~p~~~~~~~i~Yy~~i-P~L--S~~-n~tNwLl 148 (208) T protein:vir:88 76 --DALIGGRTLQYITQDIFSH-YVNYNYQPQGVTYYTRLGNFWRVYPVVPDGAPFIVNYWTVL-PEL--SLD-NPTTWAL 148 (208) T ss_pred --cCCCCCceecccCHHHhhh-hhhhccCccccceEEEEcCeEEEeeecCCCceEEEEeeecc-CCC--CCC-CchhHHh Confidence 3344667888999999866 79999999999999999999999999999999999888633 222 221 1211244 Q ss_pred hhHHHHHHHHHHHHHhcCcCccccCHHHHHHHHHHHHHHhCCchHHHHHHHhcCCCCccccCCCC Q lcl|Aclame:pro 161 AEHHRHLVQWALYRGFSIPDMESFDPNRAALAEAAFTAYFGERPDSDLRRITREDVPHHVEAFWP 225 (225) Q Consensus 161 ~~~~~~Lv~w~lyra~s~d~~~~~n~~rA~~h~q~F~~~lG~k~~~d~~r~~R~~~~~~~~~~~~ 225 (225) +.|-...+..+|+.|+. ...|.+|++.|.|+|.+++|.....|-+-.-.+ .+-.++..=- T Consensus 149 ~~aPD~YLy~~L~ea~~----f~~D~~ra~~~~~~~~~al~~L~~~d~~~~~~~-~~l~i~~~~~ 208 (208) T protein:vir:88 149 TKYPQIYLYGVLEQIYL----YTMDEERSMFWGQKLERAVMELQNEENAADFAS-SRLAIKDIER 208 (208) T ss_pred hcchhHHHHHHHHHHHh----cccCHhHHHHHHHHHHHHHHHHHhhhhhHHhcC-CceeeecccC Confidence 44544444455555554 477999999999999999998887775542221 1111111111 No 11 >protein:vir:95880 Length: 236 # NCBI annotation: 30 kDa protein # Family: family:all:31944 # MgeID: mge:1586 # MgeName: N4 # Cross-refs: genbank:acc:YP_950545;genbank:gi:119952236;genbank:GeneID:5075707 Probab=97.06 E-value=3.3e-05 Score=45.19 Aligned_cols=203 Identities=15% Similarity=0.095 Sum_probs=116.4 Q ss_pred CCHHHHHHHHH-Hhhccc-------cCCccCChHHHHHHHHHHHHHHHHhhcccccccCcceeeeeecCCcccccCcchh Q lcl|Aclame:pro 1 MTLADLIRRVR-TDANDM-------VEPYFWSDQDVADWLNDAVREAAVRGRLIHESQADAVCRIEVVAGTAVYQLHASL 72 (225) Q Consensus 1 mt~~~lI~r~r-~~l~D~-------~~~~rW~~~el~~wlNdA~~e~~~r~rl~rpda~~~~~~i~~~aGt~q~~~~~~~ 72 (225) ..++++|.+.. .+|+.. .+-.-=+.+.|+.-.|+|+.++-.| -+-...+..+....|+.-|.+-+.. T Consensus 2 ~~lkev~~~La~gqL~N~~~V~~d~g~i~~~~~p~ii~a~N~gl~~Lh~R-----f~lk~~~i~vem~eg~~~Y~L~~~y 76 (236) T protein:vir:95 2 YYIEELFCRLANGVLNNTGIVTDDRGDIEDDSKPFIIVAANEALTRLHGR-----FNMRNNNVVVEMQEGRTNYPLLAKY 76 (236) T ss_pred chHHHHHHHHhcceecceeeeecccccccccccchHHHHHhHHHHHHhhh-----hhhccCcEEEEEeeCceecccchhh Confidence 68999998865 455432 1101124567999999999999875 3334445778889999999884321 Q ss_pred ----------------------heeheeeecCCCCCCCccceeccHHHHhhcCCCCcCCCCceE-EEEeCCceEEEEecC Q lcl|Aclame:pro 73 ----------------------YELSHLGFYPADMSRPTMPVLKSAEVLDVELPEWRACTGKPL-YAIQGDTSLRLVPTP 129 (225) Q Consensus 73 ----------------------~~I~~~~~~~~~~~~~~~~~~vs~e~LD~~~p~W~~~~g~p~-~~~~~~~~~~l~P~p 129 (225) ..+++++....-+-.|+. --|| ++++|. -++..++.+-+- .| T Consensus 77 ~v~~~~p~~~~~~fI~d~~~~~~~~~ilri~~V~dd~G~~------~~Ln--------d~~~~~sv~~P~~nvLqi~-~~ 141 (236) T protein:vir:95 77 AVQSYDPNEVKCPFIMDLAGEKFAEDVIRILEVYDDKGRR------RPLN--------DRNNPCSLFTPRPNVLQNN-AP 141 (236) T ss_pred hhccCCCCCcccchhhccccchhHHHHHHHHhhccCCCcc------cccC--------CCCCCceeeeCCCcceeee-cC Confidence 111111111100001110 0111 233331 112222222222 55 Q ss_pred CCCceEEEEEEeecccccccCCCccccCCcchhHHHHHHHHHHHHHhcCcCccccCHHHHHHHHHHHHHHhCCchHHHHH Q lcl|Aclame:pro 130 DRAGILRVEGYRTPLADMALADKDTAQPEIHAEHHRHLVQWALYRGFSIPDMESFDPNRAALAEAAFTAYFGERPDSDLR 209 (225) Q Consensus 130 ~~~g~l~l~~~r~pl~~~~~~~~d~~~p~i~~~~~~~Lv~w~lyra~s~d~~~~~n~~rA~~h~q~F~~~lG~k~~~d~~ 209 (225) .....|++-+-+.| .++..|++..-..+||..|..+|..|+.||.++-=.. .-|.+++..+++.+++-+..--+-++. T Consensus 142 ~~~~~l~vkyq~~~-~~l~~~eD~~~~idlP~t~~~aL~~yVA~r~~T~ig~-~EnTAk~~~y~~~Yes~c~~v~~~~l~ 219 (236) T protein:vir:95 142 KAWEVLNVMYQAKH-PKLSTAEDGYNEIDIPDTLDPALDAYIAYRYYTSLNT-PESSAKAAEYLSFYDSICREVVEYDLT 219 (236) T ss_pred CCcceEEEEeecCC-CceeeeeCCcccccCCcchHHHHHHHHHHHhhccCCC-cccchhhhhHHHHHHHHHhhHHhhccc Confidence 55666777554444 6677776655567899999999999999999987553 447778888888888888632222222 Q ss_pred HHh-cCCCCccccCCCC Q lcl|Aclame:pro 210 RIT-REDVPHHVEAFWP 225 (225) Q Consensus 210 r~~-R~~~~~~~~~~~~ 225 (225) -.. =...-.+++.=|- T Consensus 220 s~~~v~~~~~f~r~Gw~ 236 (236) T protein:vir:95 220 SDTEVDTNTLFRKRGWR 236 (236) T ss_pred cccccccccccccCCCC Confidence 111 1223345556666 No 12 >protein:vir:108311 Length: 249 # NCBI annotation: hypothetical protein # Family: family:all:28027 # MgeID: mge:2007 # MgeName: BA3 # Cross-refs: genbank:acc:YP_001552279;genbank:gi:160700604;genbank:GeneID:5758827 Probab=94.23 E-value=0.005 Score=33.20 Aligned_cols=200 Identities=16% Similarity=0.070 Sum_probs=112.0 Q ss_pred CCHHHHHHHHHHhhcccc--C-CccCChHHHHHHHHHHHHHHHHhhcccccccCcceeeeeecCCcccccCc-------- Q lcl|Aclame:pro 1 MTLADLIRRVRTDANDMV--E-PYFWSDQDVADWLNDAVREAAVRGRLIHESQADAVCRIEVVAGTAVYQLH-------- 69 (225) Q Consensus 1 mt~~~lI~r~r~~l~D~~--~-~~rW~~~el~~wlNdA~~e~~~r~rl~rpda~~~~~~i~~~aGt~q~~~~-------- 69 (225) -|+.+||+.+=+++.=-. + +---.-++.+.-||+=+.+-..+ |+.-+-.. ++++.+.+|+.+|..+ T Consensus 3 qt~~~II~~ALk~aGvla~Getp~aee~~DA~~~Ln~Ml~~W~~~-rl~V~~~~--~~t~vl~~G~~~YtVGi~~~~~~~ 79 (249) T protein:vir:10 3 RTVGDIIRSSMRKIGVLAAGEPLPANEGDDALEVFAQMVDAWTNE-TLLIPVVN--VVTKVLVENQPEYTIGIYPEPVPD 79 (249) T ss_pred cCHHHHHHHHHHHccccccCCCCCHhHHHHHHHHHHHHHHHHHhC-ceeEEeee--eeeeeccCCcceEEeeeccccccc Confidence 689999998877665421 1 21223445666777777777665 33334432 3566688999998776 Q ss_pred --ch-------hheeheeeecCCCCCCCccceeccHHHHhhcCCCCc-----CCCCceEEEEeC----CceEEEEecCCC Q lcl|Aclame:pro 70 --AS-------LYELSHLGFYPADMSRPTMPVLKSAEVLDVELPEWR-----ACTGKPLYAIQG----DTSLRLVPTPDR 131 (225) Q Consensus 70 --~~-------~~~I~~~~~~~~~~~~~~~~~~vs~e~LD~~~p~W~-----~~~g~p~~~~~~----~~~~~l~P~p~~ 131 (225) ++ .-.|.++.+-.. +.. --+.+++|. .+.. ..++.|.|++.+ .+.+.+||.|.. T Consensus 80 ~~p~~~i~~~RP~~i~sA~~r~~-~d~-----~~~~~~i~~--EdY~rI~~Kt~~~~ps~~f~d~g~p~g~i~vwP~P~~ 151 (249) T protein:vir:10 80 PLPSNHIETGRPERILSAFIRDR-YDT-----DYIQEIIDV--ETYSRISRKTNTSRPSRFYVSKGWPLNTILFESVPYQ 151 (249) T ss_pred cCCCCceEeecchheeeeeeecc-ccc-----chhhhhhch--hhhhhcCCCCCCCCceEEEEcCCCCcceEEEEecCCC Confidence 21 112333333211 100 011222222 1111 234466655553 467899999999 Q ss_pred CceEEEEEEeecccccccCCCccccCCcchhHHHHHHHHHHHHHhcCcCccccCHHHHHHHHHHHHHHhCCchHHHHHHH Q lcl|Aclame:pro 132 AGILRVEGYRTPLADMALADKDTAQPEIHAEHHRHLVQWALYRGFSIPDMESFDPNRAALAEAAFTAYFGERPDSDLRRI 211 (225) Q Consensus 132 ~g~l~l~~~r~pl~~~~~~~~d~~~p~i~~~~~~~Lv~w~lyra~s~d~~~~~n~~rA~~h~q~F~~~lG~k~~~d~~r~ 211 (225) +-+|.+++ ..||.......+-+|.+.+++.|+.+|..=.+-+..+.=.-+- .+..+.++.. -.+-. T Consensus 152 ~~tl~~~v-~~pL~~f~~~a~ltd~i~LPpey~~AL~~NLavel~peyG~ev-~~~v~~~A~~------------a~~~i 217 (249) T protein:vir:10 152 DETLHLEV-VQPLSEILPTACLTDVINLPPGYERALIYNLCLELASEWGKEV-TALVATQAVE------------GKKWL 217 (249) T ss_pred CceEEEEE-EeehhhhccccccchhccCCHHHHHHHHHHHHHhhccccCCcc-CHHHHHHHHH------------HHHHH Confidence 99999976 5688876533345667899999999998777666665532222 3333333221 12233 Q ss_pred hcCCCCccccCC-CC Q lcl|Aclame:pro 212 TREDVPHHVEAF-WP 225 (225) Q Consensus 212 ~R~~~~~~~~~~-~~ 225 (225) .|-|.+-.+-++ .| T Consensus 218 kraN~q~~~l~~~~~ 232 (249) T protein:vir:10 218 KRNNYRPLVLGADRA 232 (249) T ss_pred HhccCcceeeecccc Confidence 355555544322 12 No 13 >protein:vir:94601 Length: 211 # NCBI annotation: PfWMP4_36 # Family: family:all:12085 # MgeID: mge:1525 # MgeName: Pf-WMP4 # Cross-refs: genbank:acc:YP_762666;genbank:gi:115304374;genbank:GeneID:5142301 Probab=74.09 E-value=0.16 Score=24.91 Aligned_cols=201 Identities=17% Similarity=0.103 Sum_probs=96.3 Q ss_pred CCHHHHHHHHHHhhccccC-Cc----cCChHHHHHHHHHHHHHHHHhhcccccc--cCcceeeeeec-CCcccccCcchh Q lcl|Aclame:pro 1 MTLADLIRRVRTDANDMVE-PY----FWSDQDVADWLNDAVREAAVRGRLIHES--QADAVCRIEVV-AGTAVYQLHASL 72 (225) Q Consensus 1 mt~~~lI~r~r~~l~D~~~-~~----rW~~~el~~wlNdA~~e~~~r~rl~rpd--a~~~~~~i~~~-aGt~q~~~~~~~ 72 (225) |.-..|+......|..-.+ ++ -=....+.+-+|.|++++-. ++.= .-+.+..|.-. .|-. +-+. .| T Consensus 1 M~~TsLL~A~NEVL~~vGE~~~~~~t~~~G~k~r~~~~~AiR~V~s----lH~W~~L~~~v~AlSW~~~~D~-A~L~-~I 74 (211) T protein:vir:94 1 MPTTSLLIACNEVLLNVGELEVADFTTPVGKKARLAYNSAIRAVSS----LHAWQHLQATVSALSWNVEGDI-ATLT-PI 74 (211) T ss_pred CCcchhHhhhHHHHhhccchhhhhhccchhHHHHHHHHHHHHHHHH----HHHHHHHHhhcchheeccccce-ehhh-hh Confidence 6555555555544433111 00 01345578889999998752 2221 11111111111 1111 1111 22 Q ss_pred heeheeeecCCCCCCCccceeccHHHHhhcCCCCcCCCCceEEEEe-CCceEEEEecCCCCceEEEEEEeecccccccCC Q lcl|Aclame:pro 73 YELSHLGFYPADMSRPTMPVLKSAEVLDVELPEWRACTGKPLYAIQ-GDTSLRLVPTPDRAGILRVEGYRTPLADMALAD 151 (225) Q Consensus 73 ~~I~~~~~~~~~~~~~~~~~~vs~e~LD~~~p~W~~~~g~p~~~~~-~~~~~~l~P~p~~~g~l~l~~~r~pl~~~~~~~ 151 (225) .++-.+.. |.+. ++-+.-+.|=...|- -+.+|.|.|..+ ..+.+-|||.|..+-.-.|..+. -+.+...+ T Consensus 75 Q~L~sVS~-G~~~-----~rs~G~~ELYer~~~-~a~T~T~l~Y~~~~~~~V~L~P~P~~a~~~~IkF~V-L~~~T~PS- 145 (211) T protein:vir:94 75 QELYSVSL-GTDV-----LRSVGFDELYERDIR-IAATATPLYYARAEQNSVLLYPTPSVADRPNIKFRV-LLQPTVPS- 145 (211) T ss_pred hhhhhhhc-cchh-----hhhcchhhhhhcccc-eeeccchhheeeccCCeeEeccCcccccccceeEEE-eeccccCC- Confidence 22222221 1111 122222333111111 145788987776 67889999999877666665443 33444333 Q ss_pred CccccCCcchhHHHHHHHHHHHHHhcCcCccccCHHHHHHHHHHHHHHhCCchHHHHHHHhcCCCCccccCCCC Q lcl|Aclame:pro 152 KDTAQPEIHAEHHRHLVQWALYRGFSIPDMESFDPNRAALAEAAFTAYFGERPDSDLRRITREDVPHHVEAFWP 225 (225) Q Consensus 152 ~d~~~p~i~~~~~~~Lv~w~lyra~s~d~~~~~n~~rA~~h~q~F~~~lG~k~~~d~~r~~R~~~~~~~~~~~~ 225 (225) .+++.+.+++.|..-.+-++-|-.-.. ...|-+-||..-..|+ ++. ..-|...-.....|-+-+| T Consensus 146 ~~t~~FtLPd~~~~LV~~~A~~LM~~~---H~~D~~~A~~~~~E~E----l~t--~~~R~~q~~~~~~~~~~~~ 210 (211) T protein:vir:94 146 LPTDNFTLPDDFYDLVHIYAQMLMHRN---HTTDLQAAQACQSEFE----LRT--HMVRTRQTSQVVGNMGGYP 210 (211) T ss_pred CCCCcccCchhHHHHHHHHHHHHHHHh---hcchhhHHHHhhhHHH----HHH--HHHhcchhhhhhhccCCCC Confidence 356667799999988877765433322 2334444555555555 443 3333222222445555667 No 14 >protein:vir:351 Length: 242 # NCBI annotation: hypothetical protein # Family: family:all:3196 # MgeID: mge:9 # MgeName: Mx8 # Cross-refs: genbank:acc:NP_203465;genbank:gi:15320621;genbank:GeneID:921727 Probab=66.35 E-value=0.27 Score=23.71 Aligned_cols=199 Identities=13% Similarity=0.075 Sum_probs=101.1 Q ss_pred CCHHHHHHHHHHh--hcccc--CCccCChH---HHHHHHHHHHHHHHHhhccccc-ccCcceeeeeecCCcccccCcchh Q lcl|Aclame:pro 1 MTLADLIRRVRTD--ANDMV--EPYFWSDQ---DVADWLNDAVREAAVRGRLIHE-SQADAVCRIEVVAGTAVYQLHASL 72 (225) Q Consensus 1 mt~~~lI~r~r~~--l~D~~--~~~rW~~~---el~~wlNdA~~e~~~r~rl~rp-da~~~~~~i~~~aGt~q~~~~~~~ 72 (225) -|+-.||+.|-.+ |.=.. .+|-=+|+ +|++.+|++..++|.| ++ ...-.-++++-..|+.-|.+.+.. T Consensus 4 ~t~lsiin~v~~~i~L~~~~~a~v~sstD~~~~~l~ala~~~g~eia~~----~dW~~l~~~~~~t~~~~~~~y~lP~D~ 79 (242) T protein:vir:35 4 DTAASIINDAAVELGLLATDVADPYASADVNLVQLCRLLKSLGQDMVRD----YQWTHLQQQWTFATQVGLANYEMPPDY 79 (242) T ss_pred HHHHHHHHHHHHHhcccCCccccccccchHHHHHHHHHHHHHHHHHHHh----cCCcchheeeeecccccCCCCCcchhh Confidence 5777888877765 33221 13444454 5899999999999966 33 222233455555666667665544 Q ss_pred heeheeeecCCCCCCCccc-eeccHHHHhhcCCCCcCCC------CceEEEEeCCceEEEEecCCCCceEEEEEE-eecc Q lcl|Aclame:pro 73 YELSHLGFYPADMSRPTMP-VLKSAEVLDVELPEWRACT------GKPLYAIQGDTSLRLVPTPDRAGILRVEGY-RTPL 144 (225) Q Consensus 73 ~~I~~~~~~~~~~~~~~~~-~~vs~e~LD~~~p~W~~~~------g~p~~~~~~~~~~~l~P~p~~~g~l~l~~~-r~pl 144 (225) ..+. +..+-.....+++ -++|. -+|..-. +.+.|+.-..+.|.+||.|+.+-++.++++ +-+. T Consensus 80 ~R~v--~~~~w~rt~~~p~~gP~s~-------~~W~~l~~~~sa~~~~~~~ri~ggqi~~~P~paa~~~~~f~YiSknWv 150 (242) T protein:vir:35 80 NRFV--DQTGWNRTQRMPLLGPLSA-------QGWQLLQVLTSAGTVDVMYRLVGGEFVLHPTPESVADIAYEYVSSHWV 150 (242) T ss_pred HHhh--cCcccceeecceecCCcCh-------hhhhhhhhhccCCCCCceEEEEcCEEEeecCcccccceeEeeecCccc Confidence 4433 1111122222221 12332 3685421 223445455569999999999888888885 4442 Q ss_pred ccccc-------CCCccccCCcchhHHHHHHHHHHHHHhcCcCccccCHHHHHHHHHHHHHHhCCchHHHHHHHhcCCCC Q lcl|Aclame:pro 145 ADMAL-------ADKDTAQPEIHAEHHRHLVQWALYRGFSIPDMESFDPNRAALAEAAFTAYFGERPDSDLRRITREDVP 217 (225) Q Consensus 145 ~~~~~-------~~~d~~~p~i~~~~~~~Lv~w~lyra~s~d~~~~~n~~rA~~h~q~F~~~lG~k~~~d~~r~~R~~~~ 217 (225) ..... .+.|+|++-+++. -|+-.+..|--..- +++ -+.-+..|+.+|-.....| .-...- T Consensus 151 ~~~~~~~k~~~t~~ad~Dt~~l~er---LL~LGlIWRWkraK---Gld---y~e~l~~YE~aL~~~~~~d----~G~~~l 217 (242) T protein:vir:35 151 GTGGSETPNADAPESGGDTLFFDRR---LLVCGLKLRWQRAK---GFD---STACQDDYDKALERAQGGD----GAAPVL 217 (242) T ss_pred cCCCCccccccccccCCCceechHH---HHhHhHHHHHHhhc---CCC---HHHHHHHHHHHHHHHHhhc----CCCcee Confidence 21111 1134455556543 34455555543221 111 2345667777764332232 222223 Q ss_pred ccccC-CCC Q lcl|Aclame:pro 218 HHVEA-FWP 225 (225) Q Consensus 218 ~~~~~-~~~ 225 (225) ..++. +-| T Consensus 218 ~l~~~~~~~ 226 (242) T protein:vir:35 218 SLNRRPFAT 226 (242) T ss_pred cCCCCccCC Confidence 33322 333 No 15 >protein:vir:80185 Length: 221 # NCBI annotation: tail tubular protein A # Family: family:all:12085 # MgeID: mge:1878 # MgeName: Pf-WMP3 # Cross-refs: genbank:acc:YP_001285796;genbank:gi:148747830;genbank:GeneID:5220461 Probab=56.38 E-value=0.46 Score=22.44 Aligned_cols=202 Identities=14% Similarity=0.125 Sum_probs=84.1 Q ss_pred CCHHHHHHHHHHhhccccC-Cc----cCChHHHHHHHHHHHHHHHHhhccccccc--CcceeeeeecCCcccccCcchhh Q lcl|Aclame:pro 1 MTLADLIRRVRTDANDMVE-PY----FWSDQDVADWLNDAVREAAVRGRLIHESQ--ADAVCRIEVVAGTAVYQLHASLY 73 (225) Q Consensus 1 mt~~~lI~r~r~~l~D~~~-~~----rW~~~el~~wlNdA~~e~~~r~rl~rpda--~~~~~~i~~~aGt~q~~~~~~~~ 73 (225) |.-..|+......|..-++ ++ -=....+.+-+|.|++++-. ++-=. -+.+..|.-. |-. +-+ +.|. T Consensus 1 M~~TtLL~A~NEVL~~iGE~~~~~~s~~~G~r~k~~~~~AlR~V~a----iH~W~~L~~~i~AiSW~-~D~-A~L-~~IQ 73 (221) T protein:vir:80 1 MSDTTLLQASNEVLRSIGERPLLQLSGTTGDRLKDVFRQALRDVEA----IHTWDWLYNQIPAISWT-QDE-AYL-GDIQ 73 (221) T ss_pred CCcchhHhhhHHHHhhccchhhhhhccchhHHHHHHHHHHHHHHHH----HHHHHHHHhhccceeec-ccc-chh-hhhh Confidence 6555555555544443211 00 01345678889999988742 22210 1111111111 111 111 1222 Q ss_pred eeheeeecCCCCCCCccceeccHHHHhhcC--CCC-cCCCCc---eEEEEe-CCceEEEEecCCCCc-eEEEEEEeeccc Q lcl|Aclame:pro 74 ELSHLGFYPADMSRPTMPVLKSAEVLDVEL--PEW-RACTGK---PLYAIQ-GDTSLRLVPTPDRAG-ILRVEGYRTPLA 145 (225) Q Consensus 74 ~I~~~~~~~~~~~~~~~~~~vs~e~LD~~~--p~W-~~~~g~---p~~~~~-~~~~~~l~P~p~~~g-~l~l~~~r~pl~ 145 (225) ++-.|.. |......+.+ .|.|-.. -+= -+.+|. |.|..+ ..+.+-|||.|..+- .-.|..| +-+. T Consensus 74 ~L~tVS~-G~kt~G~~EL-----qwvdftdYdk~~~~s~T~Tddn~m~Y~~~~~~~V~L~P~P~~s~a~~~IrF~-VL~~ 146 (221) T protein:vir:80 74 RLFTVSC-GDKTTGYREL-----QWVDFTDYDKQPITSYTGTDDNAMWYTMTSNGRVKLNPYPEDSQAQQRIRFY-VLQT 146 (221) T ss_pred hhhhhcc-cccccchhhh-----hccccccccccceeeeecccCcceeeeeccCCeeEeccCccccccccceeEE-Eeec Confidence 2222221 1100011111 1111100 000 023443 776666 678899999998654 3344333 2233 Q ss_pred ccccCCCccccCCcchhHHHHHHHHHHHHHhcCcCccccCHHHHHHHHHHHHHHhCCchHHHHHHHhcCCCCccccCCCC Q lcl|Aclame:pro 146 DMALADKDTAQPEIHAEHHRHLVQWALYRGFSIPDMESFDPNRAALAEAAFTAYFGERPDSDLRRITREDVPHHVEAFWP 225 (225) Q Consensus 146 ~~~~~~~d~~~p~i~~~~~~~Lv~w~lyra~s~d~~~~~n~~rA~~h~q~F~~~lG~k~~~d~~r~~R~~~~~~~~~~~~ 225 (225) +...+.+.+..-.+|+.|..-.+-++-|-.-.. ...|-+-|+..-..|+ ++ +..-|..-.++|..--|++- T Consensus 147 ~T~PS~~s~~FsvLPe~~~~LV~~~A~~LM~~~---H~~D~~~A~~~~~E~E----i~--s~~~R~~erkaptqqlsmyr 217 (221) T protein:vir:80 147 LTMPSQDSSTFSVLPERYMPLVIKRASYLMALR---HLDDTSGAAYFNNEYE----IL--SQQYRNNERKAPTQQLSMYR 217 (221) T ss_pred cccCCCCCccccccchhhhHHHHHHHHHHHHHh---hcchhhHHHHhhhHHH----HH--HHHHhhhhhcchhHHHHHHH Confidence 333333333333489999887777765433322 2334444655555555 32 22222222222222112222 Done!