Query lcl|Aclame:protein:vir:99874|NCBI_annot:hypothetical protein|genbank:acc:YP_164078;genbank:gi:56692610;genbank:GeneID:3192602 Match_columns 154 No_of_seqs 100 out of 105 Neff 6.7 Searched_HMMs 1612 Date Sun Dec 1 13:46:03 2013 Command /home/guerois/workspace/virfam/python/lib/hhsearch//hhsearch2 -i .//seq/seq_42 -d /home/guerois/workspace/virfam/python/profile_database/capsid_neck_tail.hhm -glob -cpu 7 -o .//seq/HHR/seq_42_vs_rec_db.hhr No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM 1 protein:vir:99874 Length: 154 100.0 4.5E-59 2.8E-62 340.5 16.8 154 1-154 1-154 (154) 2 protein:vir:488 Length: 187 # 100.0 7.9E-48 4.9E-51 278.8 15.8 141 9-154 1-143 (187) 3 protein:vir:4461 Length: 186 # 100.0 3.5E-47 2.1E-50 275.3 16.1 141 9-154 1-143 (186) 4 protein:vir:4515 Length: 186 # 100.0 6E-47 3.7E-50 274.0 15.7 141 9-154 1-143 (186) 5 protein:vir:99226 Length: 157 100.0 2.6E-41 1.6E-44 243.1 15.7 147 5-154 1-153 (157) 6 protein:vir:79247 Length: 157 100.0 4.1E-41 2.6E-44 242.0 15.6 147 5-154 1-153 (157) 7 protein:vir:103883 Length: 159 100.0 1.9E-39 1.2E-42 232.8 15.6 149 3-154 1-155 (159) 8 protein:vir:79065 Length: 154 99.6 8.7E-18 5.4E-21 114.1 10.4 134 5-154 1-137 (154) 9 protein:vir:107857 Length: 154 99.6 8.3E-18 5.2E-21 114.2 10.3 134 5-154 1-137 (154) 10 protein:vir:1994 Length: 182 # 98.1 1E-07 6.4E-11 58.9 11.4 133 5-154 1-142 (182) 11 protein:vir:10327 Length: 182 97.8 3.4E-06 2.1E-09 50.6 13.8 133 5-154 1-144 (182) 12 protein:vir:96764 Length: 177 97.3 2.2E-05 1.4E-08 46.1 13.2 137 1-154 1-145 (177) 13 protein:vir:93602 Length: 114 60.0 0.38 0.00024 22.9 9.0 113 5-150 1-114 (114) 14 protein:vir:4348 Length: 121 # 57.1 0.44 0.00027 22.5 8.5 116 5-152 1-121 (121) 15 protein:vir:1892 Length: 121 # 41.7 0.92 0.00057 20.8 8.4 116 5-152 1-121 (121) 16 protein:vir:9824 Length: 132 # 27.7 1.8 0.0011 19.2 8.5 122 5-154 1-132 (132) 17 protein:vir:3037 Length: 132 # 27.7 1.8 0.0011 19.2 8.5 122 5-154 1-132 (132) 18 protein:vir:97211 Length: 150 24.8 2.1 0.0013 18.8 7.8 135 5-154 1-150 (150) No 1 >protein:vir:99874 Length: 154 # NCBI annotation: hypothetical protein # Family: family:all:964 # MgeID: mge:1480 # MgeName: B3 # Cross-refs: genbank:acc:YP_164078;genbank:gi:56692610;genbank:GeneID:3192602 Probab=100.00 E-value=4.5e-59 Score=340.45 Aligned_cols=154 Identities=100% Similarity=1.477 Sum_probs=151.8 Q ss_pred CccccccccchhHHHHHHHHhCCcchhhhcccchHHHHhhhCCCCCeEEEEeccccCCCCCCcccccceeEEeeeEEEEE Q lcl|Aclame:pro 1 MADGLCAPFDHNLVIERLRDQVKVLKHVGGAAELGTITQLRDFRTPAAYVLLAQETLSPKPAGHAGGATRQMANVHFAIT 80 (154) Q Consensus 1 ~~~~m~~pf~l~~ii~rLra~~p~~~~V~~aa~la~~~~~~~~~~PaayVi~~~d~~~~~~~~~~~g~~~Q~~~~~~~Vv 80 (154) |+||+|+|||++|||+|||++||+|++|++++||+++.+.+++|+|||||+|.+|.++++++++++|.++|+++++|+|| T Consensus 1 ~~~~~~~pfdl~~Vi~RLra~~p~l~~V~gaadlAal~~~~~~p~PaAyVlp~~d~~~~~~~~~~~g~~~Q~i~~~f~Vv 80 (154) T protein:vir:99 1 MADGLCAPFDHNLVIERLRDQVKVLKHVGGAAELGTITQLRDFRTPAAYVLLAQETLSPKPAGHAGGATRQMANVHFAIT 80 (154) T ss_pred CCCCccCCcccHHHHHHHHHhCcchhhhhhhhhhhhhhhhcCCCCceEEEEecccccCCCCCCccccceeeeeeeEEEEE Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred EEEeccCCccchhHHHHHHHHHHHHHHHHcCCCCCCCCCccceEEcCCeeeeecCcEEEEEEEeEEeeEecccC Q lcl|Aclame:pro 81 VAVRNYRDNKGVTAADDLRPVLGDVRKALIGWTPPGLAGARDCQLVQGQVVDYDASVLIWTDLYQTQHAIGRTS 154 (154) Q Consensus 81 vvvr~~~~~~G~~a~~~~~~l~~~v~~AL~GW~P~~~~g~~pi~~~~g~l~~~~~g~~~y~~~F~~~~~i~r~~ 154 (154) |++||+++++|+.+.+++++++++||+||+||+|++.+|++||+|++|++++|++|++||+++|+++++||||| T Consensus 81 l~v~~~~d~~G~~a~d~l~~lr~~v~~AL~GW~P~~~~G~~pi~~~gG~l~d~~~g~l~y~~~F~~~~~lgr~~ 154 (154) T protein:vir:99 81 VAVRNYRDNKGVTAADDLRPVLGDVRKALIGWTPPGLAGARDCQLVQGQVVDYDASVLIWTDLYQTQHAIGRTS 154 (154) T ss_pred EEeeccCcccchhhHHHHHHHHHHHHHHHhCCCCCcccCCceeeecCcceeeccCcEEEEeeeeeeeeecCCCC Confidence 99999999999999999999999999999999998888999999999999999999999999999999999999 No 2 >protein:vir:488 Length: 187 # NCBI annotation: hypothetical protein # Family: family:all:964 # MgeID: mge:11 # MgeName: P27 # Cross-refs: genbank:acc:NP_543095;swissprot:trembl:q8w624;genbank:gi:18249907;uniprot:Q8W624;genbank:GeneID:929697 Probab=100.00 E-value=7.9e-48 Score=278.81 Aligned_cols=141 Identities=26% Similarity=0.406 Sum_probs=134.3 Q ss_pred cchhHHHHHHHHhCCcch-hhhcccchHHHHhhhCCCCCeEEEEeccccCCCCCCcccccceeEEeeeEEEEEEEEeccC Q lcl|Aclame:pro 9 FDHNLVIERLRDQVKVLK-HVGGAAELGTITQLRDFRTPAAYVLLAQETLSPKPAGHAGGATRQMANVHFAITVAVRNYR 87 (154) Q Consensus 9 f~l~~ii~rLra~~p~~~-~V~~aa~la~~~~~~~~~~PaayVi~~~d~~~~~~~~~~~g~~~Q~~~~~~~Vvvvvr~~~ 87 (154) -.|++||+|||++||+|+ ||.++++|+++++.+++|+|||||+|.+|.++++ .++|.++|+++++|+||||+||++ T Consensus 1 Mkl~~Ii~rLra~vP~l~grV~gaad~aal~~~~~lp~PaAyVlp~~d~~~~~---~sq~~~~Q~i~e~f~Vvl~vrn~~ 77 (187) T protein:vir:48 1 MKLTTIIAALRERCPRFEDRVGGAAQFKAIPDAGKLRLPAAYVVPSDDAPGEQ---KSQTDYWQDLTEGFSVIVVLSNER 77 (187) T ss_pred CchhHHHHHHHHhcchhhhhhhhhhhhhhhhhhcCCCCceEEEEeccccCCCC---CCCcceeeeeeeEEEEEEEEeccC Confidence 689999999999999999 9999999999999999999999999999998865 467899999999999999999999 Q ss_pred CccchhH-HHHHHHHHHHHHHHHcCCCCCCCCCccceEEcCCeeeeecCcEEEEEEEeEEeeEecccC Q lcl|Aclame:pro 88 DNKGVTA-ADDLRPVLGDVRKALIGWTPPGLAGARDCQLVQGQVVDYDASVLIWTDLYQTQHAIGRTS 154 (154) Q Consensus 88 ~~~G~~a-~~~~~~l~~~v~~AL~GW~P~~~~g~~pi~~~~g~l~~~~~g~~~y~~~F~~~~~i~r~~ 154 (154) |.+|+.+ .|.++++|++||+||+||+|+ ++++||+|++|++++|++|+++|+++|+++++|||+. T Consensus 78 D~~G~~~a~D~l~~lr~~v~~AL~GW~P~--~~~~pi~~~gG~lvd~~~g~l~y~~~F~~~~ql~~~~ 143 (187) T protein:vir:48 78 DEKGQWAAYDAVHDVRRELWKALLGWMPD--PQGGEIVYAGGTLLDLNRYELYYQFDFTAKYEITEED 143 (187) T ss_pred CCCCcchhhHHHHHHHHHHHHHHhCcCcC--CCCceEEEcCceEeeecCcEEEEEEEEEeecccCCCC Confidence 9999865 689999999999999999998 6789999999999999999999999999999999998 No 3 >protein:vir:4461 Length: 186 # NCBI annotation: hypothetical protein # Family: family:all:964 # MgeID: mge:96 # MgeName: ST64B # Cross-refs: genbank:acc:NP_700384;genbank:gi:23505456;genbank:GeneID:955663 Probab=100.00 E-value=3.5e-47 Score=275.30 Aligned_cols=141 Identities=27% Similarity=0.429 Sum_probs=134.1 Q ss_pred cchhHHHHHHHHhCCcch-hhhcccchHHHHhhhCCCCCeEEEEeccccCCCCCCcccccceeEEeeeEEEEEEEEeccC Q lcl|Aclame:pro 9 FDHNLVIERLRDQVKVLK-HVGGAAELGTITQLRDFRTPAAYVLLAQETLSPKPAGHAGGATRQMANVHFAITVAVRNYR 87 (154) Q Consensus 9 f~l~~ii~rLra~~p~~~-~V~~aa~la~~~~~~~~~~PaayVi~~~d~~~~~~~~~~~g~~~Q~~~~~~~Vvvvvr~~~ 87 (154) -.|++||+|||++||+|+ +|.++++|+++++.+++|+|||||+|.+|.++++ .++|.++|+++++|+|||++||++ T Consensus 1 mkl~~Vi~RLra~vP~l~~rV~gaad~aai~~~~~lp~PaAyVip~~d~~g~~---~s~g~~~Q~i~~~f~Vvl~vrn~~ 77 (186) T protein:vir:44 1 MKLTPIIAALRSRCPRFENRVGGAAQFKAIPEAGKLRLPAAYVVPAEDVTGEQ---KSQTDYWQDLTEGFSVIVVLSNER 77 (186) T ss_pred CChhHHHHHHHHhcchhhhhhhhhhhhhhhhhhcCCCCceEEEEeccccCCCC---CcccceeEeeeeeEEEEEEEeccC Confidence 679999999999999997 8999999999999999999999999999998864 478999999999999999999999 Q ss_pred Cccchh-HHHHHHHHHHHHHHHHcCCCCCCCCCccceEEcCCeeeeecCcEEEEEEEeEEeeEecccC Q lcl|Aclame:pro 88 DNKGVT-AADDLRPVLGDVRKALIGWTPPGLAGARDCQLVQGQVVDYDASVLIWTDLYQTQHAIGRTS 154 (154) Q Consensus 88 ~~~G~~-a~~~~~~l~~~v~~AL~GW~P~~~~g~~pi~~~~g~l~~~~~g~~~y~~~F~~~~~i~r~~ 154 (154) |.+|+. +.|.++++|++||+||+||+|+ ++++||+|++|++++|++|+++|+++|+++++|+|+. T Consensus 78 d~~G~~aa~D~l~~lr~~v~~AL~GW~P~--~~~~pi~~~gG~lvd~~~g~l~y~~~F~~~~~l~~~~ 143 (186) T protein:vir:44 78 DEKGQWASYDAVHDVRQEIWKALLGWEPD--SQVHEIQYAGGMLLDLNRHELYYQFDFTVKYEITETD 143 (186) T ss_pred CCCCCccchHHHHHHHHHHHHHHcCcCcC--CCCceEEEcCceEEeecCcEEEEEEEEEEeeccCCCC Confidence 999986 4688999999999999999997 6789999999999999999999999999999999999 No 4 >protein:vir:4515 Length: 186 # NCBI annotation: unknown # Family: family:all:964 # MgeID: mge:97 # MgeName: V # Cross-refs: genbank:acc:NP_599041;genbank:gi:19548999;genbank:GeneID:935225 Probab=100.00 E-value=6e-47 Score=273.98 Aligned_cols=141 Identities=25% Similarity=0.369 Sum_probs=134.2 Q ss_pred cchhHHHHHHHHhCCcch-hhhcccchHHHHhhhCCCCCeEEEEeccccCCCCCCcccccceeEEeeeEEEEEEEEeccC Q lcl|Aclame:pro 9 FDHNLVIERLRDQVKVLK-HVGGAAELGTITQLRDFRTPAAYVLLAQETLSPKPAGHAGGATRQMANVHFAITVAVRNYR 87 (154) Q Consensus 9 f~l~~ii~rLra~~p~~~-~V~~aa~la~~~~~~~~~~PaayVi~~~d~~~~~~~~~~~g~~~Q~~~~~~~Vvvvvr~~~ 87 (154) -.|++||+|||++||+|+ ||.++++|+++++.+++|+|||||+|.+|.++++. ++|.++|+++++|+|||++||++ T Consensus 1 Mkl~~Ii~RLra~vP~l~grV~gaad~a~l~~~~~lp~PaAyVip~~d~~~~~~---sq~~~~Q~i~e~f~Vvl~vrn~~ 77 (186) T protein:vir:45 1 MKLTPVIAALRARCPYFENRVAGAAQFKNLPEVGKLRLPAAYVVPGDDSPGENK---SQTDYWQELKEGFSVVVILSNGR 77 (186) T ss_pred CChHHHHHHHHHhcchhhchhhhhhhhhhhHhhcCCCCceEEEEecccccCCCc---cccceeeeeeeEEEEEEEEeccC Confidence 689999999999999999 99999999999999999999999999999988644 67899999999999999999999 Q ss_pred CccchhH-HHHHHHHHHHHHHHHcCCCCCCCCCccceEEcCCeeeeecCcEEEEEEEeEEeeEecccC Q lcl|Aclame:pro 88 DNKGVTA-ADDLRPVLGDVRKALIGWTPPGLAGARDCQLVQGQVVDYDASVLIWTDLYQTQHAIGRTS 154 (154) Q Consensus 88 ~~~G~~a-~~~~~~l~~~v~~AL~GW~P~~~~g~~pi~~~~g~l~~~~~g~~~y~~~F~~~~~i~r~~ 154 (154) |++|+.+ .|.++++|++||+||+||+|+ ++++||+|++|++++|++|+++|+++|+++++|+|+. T Consensus 78 d~~G~~aa~D~l~~lr~~v~~AL~GW~P~--~~~~pi~~~gG~lvd~~~g~l~y~~~F~~~~~l~~~~ 143 (186) T protein:vir:45 78 DERGQFASYDVVDDVRQMLFKALLGWNPE--ACGNPITYDGGTLLDLNRHELIYQFDFSVISELTEDD 143 (186) T ss_pred CCCCcccchhHHHHHHHHHHHHHhCcccC--CCCceEEEcCceEEeecCcEEEEEEEEEEeeccCCCc Confidence 9999865 688999999999999999998 6789999999999999999999999999999999998 No 5 >protein:vir:99226 Length: 157 # NCBI annotation: hypothetical protein # Family: family:all:2406 # MgeID: mge:1649 # MgeName: DMS3 # Cross-refs: genbank:acc:YP_950461;genbank:gi:119953662;genbank:GeneID:4643086 Probab=100.00 E-value=2.6e-41 Score=243.07 Aligned_cols=147 Identities=23% Similarity=0.431 Sum_probs=133.8 Q ss_pred cccccch----hHHHHHHHHhCCcchhhhcccchHHHHhhhCCCCCeEEEEeccccCCCCCCcccccceeEEeeeEEEEE Q lcl|Aclame:pro 5 LCAPFDH----NLVIERLRDQVKVLKHVGGAAELGTITQLRDFRTPAAYVLLAQETLSPKPAGHAGGATRQMANVHFAIT 80 (154) Q Consensus 5 m~~pf~l----~~ii~rLra~~p~~~~V~~aa~la~~~~~~~~~~PaayVi~~~d~~~~~~~~~~~g~~~Q~~~~~~~Vv 80 (154) |.+|||+ ++||+|||++||+|++|++++||+++.+.+++ +|+|||+|.+|++.....+.++++.+|+++++|+|| T Consensus 1 ~~~~~d~~a~~~~IierLka~vp~l~~V~~aadla~i~~~~q~-tPaayVi~~gd~~~~~~~~~~~~~~~Q~i~q~~~Vv 79 (157) T protein:vir:99 1 MSDPFDYLFLEPLLIERIRSEVPGLAIVSGVPDLAALSEQDQP-APSVYVVYLGDEIGTGADHQGGRRAIQAIGQQWAVV 79 (157) T ss_pred CCCchhhhhhhHHHHHHHHhhhhHHHhhhcccchHHHhhccCC-CcEEEEEecccccCCCcccccccceeeeeeeeEEEE Confidence 7777775 89999999999999999999999999998986 799999999999888777888899999999999999 Q ss_pred EEEeccCCcc-chhHHHHHHHHHHHHHHHHcCCCCCCCCCccceEEc-CCeeeeecCcEEEEEEEeEEeeEecccC Q lcl|Aclame:pro 81 VAVRNYRDNK-GVTAADDLRPVLGDVRKALIGWTPPGLAGARDCQLV-QGQVVDYDASVLIWTDLYQTQHAIGRTS 154 (154) Q Consensus 81 vvvr~~~~~~-G~~a~~~~~~l~~~v~~AL~GW~P~~~~g~~pi~~~-~g~l~~~~~g~~~y~~~F~~~~~i~r~~ 154 (154) |||||+++++ |+.+.+++|+|+.+||+||+||+|| .++.|+++. .+.-..|++|+.||++.|++++...|-. T Consensus 80 lavr~~~~~~~g~~a~d~ag~ll~~v~~AL~GW~P~--~~~~pl~~~~~~~~~~y~~gf~yypl~F~~~~~~~~~~ 153 (157) T protein:vir:99 80 LVVHYADSSNSGEGARREAGPLLGRLVKALTGWAPA--IDVAPLARSARQSPVTYASGYFYFPLVFTARFVYPRVK 153 (157) T ss_pred EEEeccccccccchhHHHHHHHHHHHHHHhcCCcCc--ccCCceeeeecCCcccccCceEEEEEEEEEeeeccccc Confidence 9999999876 5667889999999999999999998 568999997 3444789999999999999999999987 No 6 >protein:vir:79247 Length: 157 # NCBI annotation: hypothetical protein # Family: family:all:2406 # MgeID: mge:1867 # MgeName: Phage MP22 # Cross-refs: genbank:acc:YP_001469166;genbank:gi:157835008;genbank:GeneID:5648828 Probab=100.00 E-value=4.1e-41 Score=241.98 Aligned_cols=147 Identities=22% Similarity=0.407 Sum_probs=132.6 Q ss_pred cccccch----hHHHHHHHHhCCcchhhhcccchHHHHhhhCCCCCeEEEEeccccCCCCCCcccccceeEEeeeEEEEE Q lcl|Aclame:pro 5 LCAPFDH----NLVIERLRDQVKVLKHVGGAAELGTITQLRDFRTPAAYVLLAQETLSPKPAGHAGGATRQMANVHFAIT 80 (154) Q Consensus 5 m~~pf~l----~~ii~rLra~~p~~~~V~~aa~la~~~~~~~~~~PaayVi~~~d~~~~~~~~~~~g~~~Q~~~~~~~Vv 80 (154) |.+|||+ ++||+|||++||+|++|++++||+++.+.+++ +|||||+|.+|+......+.++++++|.++++|+|| T Consensus 1 ~~~~~d~~a~~~~IierLka~v~~l~~V~~aadla~i~e~~q~-tPaayVv~~gd~~~~~~~~~~~~~~~Q~vtq~f~Vv 79 (157) T protein:vir:79 1 MSDPFDYLFLEPLLIERIRSEVPGLAIVSGVPDLAALSEQDQP-APSVYVVYLGDEIGTGADYQGGRRAIQAIGQQWAVV 79 (157) T ss_pred CCCchhhhhhhHHHHHHHHhhhhhhhhhccccchhhhhhhcCC-CcEEEEEecccccCCCcccccCcceeeeeeeeEEEE Confidence 7777775 89999999999999999999999999998886 799999999999887777777888999999999999 Q ss_pred EEEeccCCccchh-HHHHHHHHHHHHHHHHcCCCCCCCCCccceEEcC-CeeeeecCcEEEEEEEeEEeeEecccC Q lcl|Aclame:pro 81 VAVRNYRDNKGVT-AADDLRPVLGDVRKALIGWTPPGLAGARDCQLVQ-GQVVDYDASVLIWTDLYQTQHAIGRTS 154 (154) Q Consensus 81 vvvr~~~~~~G~~-a~~~~~~l~~~v~~AL~GW~P~~~~g~~pi~~~~-g~l~~~~~g~~~y~~~F~~~~~i~r~~ 154 (154) |+|||+++++|.. +.|++|+++.+||+||+||+|+ ++++|+++.. +.-..|++|+.||++.|++++...|-. T Consensus 80 lavrn~~~~~~~~a~~d~ag~ll~~v~~AL~GW~P~--~~~~pl~~~~~~~~~~y~~gf~yypl~F~~~~~~~~~~ 153 (157) T protein:vir:79 80 LVVHYADSSNSGEGARREAGPLLGRLVKALTGWAPA--IDVAPLARSARQSPVTYASGYFYFPLVFTARFVYPRVK 153 (157) T ss_pred EEEeccccccccchhHHHHHHHHHHHHHHhcCcccc--ccCCceeeeecCCcccccCCeEEEEEEEEEeeeccccc Confidence 9999999987554 6678999999999999999997 5689999984 444789999999999999999999987 No 7 >protein:vir:103883 Length: 159 # NCBI annotation: hypothetical protein # Family: family:all:2406 # MgeID: mge:1522 # MgeName: D3112 # Cross-refs: genbank:acc:NP_938246;genbank:gi:38229151;genbank:GeneID:2648198 Probab=100.00 E-value=1.9e-39 Score=232.84 Aligned_cols=149 Identities=23% Similarity=0.426 Sum_probs=134.4 Q ss_pred cccccccch----hHHHHHHHHhCCcchhhhcccchHHHHhhhCCCCCeEEEEeccccCCCCCCcccccceeEEeeeEEE Q lcl|Aclame:pro 3 DGLCAPFDH----NLVIERLRDQVKVLKHVGGAAELGTITQLRDFRTPAAYVLLAQETLSPKPAGHAGGATRQMANVHFA 78 (154) Q Consensus 3 ~~m~~pf~l----~~ii~rLra~~p~~~~V~~aa~la~~~~~~~~~~PaayVi~~~d~~~~~~~~~~~g~~~Q~~~~~~~ 78 (154) -.|.+|||+ ++||+|||++||+|++|++++||+++.+.+|. +|||||+|.++++.....+.++++.+|+++++|+ T Consensus 1 ~~~~~~~n~lav~~~IieRLka~v~~lr~V~~aadla~i~el~q~-tPaayV~~~g~~~~~~~~~~~~~~~~q~v~q~w~ 79 (159) T protein:vir:10 1 MSTAEPFDYLFLETLLVERIRAEVPGLQDVSGVPDLATLDEQRQG-SPCVYVVYLGDEIGTGASHQGGSRAIQTVTQHWA 79 (159) T ss_pred CCcccchhhhhhhHHHHHHHHhhhhHHHhhhcccchHHHHhhhCC-CcEEEEEecccccCCCcccccccceeeeeeeEEE Confidence 347788886 99999999999999999999999999999996 8999999999998777777788899999999999 Q ss_pred EEEEEeccCCccchhHH-HHHHHHHHHHHHHHcCCCCCCCCCccceEEcCCee-eeecCcEEEEEEEeEEeeEecccC Q lcl|Aclame:pro 79 ITVAVRNYRDNKGVTAA-DDLRPVLGDVRKALIGWTPPGLAGARDCQLVQGQV-VDYDASVLIWTDLYQTQHAIGRTS 154 (154) Q Consensus 79 Vvvvvr~~~~~~G~~a~-~~~~~l~~~v~~AL~GW~P~~~~g~~pi~~~~g~l-~~~~~g~~~y~~~F~~~~~i~r~~ 154 (154) |||+|||+++++|..+. +++|+|+.+|++||+||+|| .+.+|+.+..... .+|++|+.||++.|++++...|-. T Consensus 80 Vvlavr~~~~q~~~~a~~d~aG~ll~~v~~AL~GW~P~--~~~~Pl~r~~~~~~~~y~~gfayyPl~F~~~~~~~~~~ 155 (159) T protein:vir:10 80 AVLTLYYADAQGDGQGARREAGPLLGRLLKALTGWVPD--QGVTPLARSPQASPVSYSNGFFYFPLVFTANFVFPRLK 155 (159) T ss_pred EEEEEecccccCccchhhHHHHHHHHHHHHHhcCcccC--CcCCCeeecccCCCccccCCEEEeeeeEEeeeeccccc Confidence 99999999999876666 56999999999999999998 4579999885432 789999999999999999999987 No 8 >protein:vir:79065 Length: 154 # NCBI annotation: gp11 # Family: family:all:1532 # MgeID: mge:1862 # MgeName: phiE255 # Cross-refs: genbank:acc:YP_001111211;genbank:gi:134288825;genbank:GeneID:4960739 Probab=99.58 E-value=8.7e-18 Score=114.12 Aligned_cols=134 Identities=19% Similarity=0.278 Sum_probs=106.2 Q ss_pred cccccc-hhHHHHHHHHhCCcchhhhcccchHHHHhhhCCCCC--eEEEEeccccCCCCCCcccccceeEEeeeEEEEEE Q lcl|Aclame:pro 5 LCAPFD-HNLVIERLRDQVKVLKHVGGAAELGTITQLRDFRTP--AAYVLLAQETLSPKPAGHAGGATRQMANVHFAITV 81 (154) Q Consensus 5 m~~pf~-l~~ii~rLra~~p~~~~V~~aa~la~~~~~~~~~~P--aayVi~~~d~~~~~~~~~~~g~~~Q~~~~~~~Vvv 81 (154) |.+=.. ++.|++|||++.|.|. ..-|.+-++...+.+| |+-|-|.|.+- .+.++++...|.-+.+|.|+| T Consensus 1 m~~t~~ii~~iv~rL~~~lP~~~----ve~fP~~p~ey~l~h~~GAvLV~Y~GS~f---~~~~~~~~i~Q~R~~~~~vTV 73 (154) T protein:vir:79 1 MATTLEMVDSVVARLRVKLPALV----TEYFPERPDEYRLNHAIGALLVSYPGSQY---DTTVDTDMVVQPRRVKFAVAI 73 (154) T ss_pred CchhHHHHHHHHHHHHHhCCcce----EeeCCCChhHcCCCCCceeEEEEecCccc---CCcccCCceeeeeEEEEEEEE Confidence 666554 5789999999999986 3445554555566677 55666666554 445688999999999999999 Q ss_pred EEeccCCccchhHHHHHHHHHHHHHHHHcCCCCCCCCCccceEEcCCeeeeecCcEEEEEEEeEEeeEecccC Q lcl|Aclame:pro 82 AVRNYRDNKGVTAADDLRPVLGDVRKALIGWTPPGLAGARDCQLVQGQVVDYDASVLIWTDLYQTQHAIGRTS 154 (154) Q Consensus 82 vvr~~~~~~G~~a~~~~~~l~~~v~~AL~GW~P~~~~g~~pi~~~~g~l~~~~~g~~~y~~~F~~~~~i~r~~ 154 (154) ++|+.++..|+- .++++||.+|.||+|++| +|++.++.++++.++|.|.|+++|.++...=... T Consensus 74 i~r~l~g~~gal------~~LD~vR~aL~Gf~ppdc---~~~~lv~d~f~ge~~G~W~Y~l~~at~t~~Ve~~ 137 (154) T protein:vir:79 74 VLRQLNGRGGAI------DVLDHVRTALVGFRPPDC---KKLAAVSDKFLGESAGLWQYVIEFSAGAVIVEDA 137 (154) T ss_pred EeeccCCcchhh------HHHHHHHHHHhccccCCC---ceeehhhhcccccccceeeeeeeeccchhhhccC Confidence 999998766653 479999999999999986 6899999999999999999999999965543333 No 9 >protein:vir:107857 Length: 154 # NCBI annotation: gp37 # Family: family:all:1532 # MgeID: mge:1565 # MgeName: BcepMu # Cross-refs: genbank:acc:YP_024710;genbank:gi:48696947;genbank:GeneID:2845945 Probab=99.58 E-value=8.3e-18 Score=114.21 Aligned_cols=134 Identities=18% Similarity=0.279 Sum_probs=106.1 Q ss_pred cccccc-hhHHHHHHHHhCCcchhhhcccchHHHHhhhCCCCC--eEEEEeccccCCCCCCcccccceeEEeeeEEEEEE Q lcl|Aclame:pro 5 LCAPFD-HNLVIERLRDQVKVLKHVGGAAELGTITQLRDFRTP--AAYVLLAQETLSPKPAGHAGGATRQMANVHFAITV 81 (154) Q Consensus 5 m~~pf~-l~~ii~rLra~~p~~~~V~~aa~la~~~~~~~~~~P--aayVi~~~d~~~~~~~~~~~g~~~Q~~~~~~~Vvv 81 (154) |.+=.. ++.|++|||++.|.|. ..-|.+-++...+.+| |+-|-|.|.+- .+.++++...|.-+.+|.|+| T Consensus 1 m~~t~~ii~aiv~rL~~~lP~~~----ve~fP~~p~ey~l~h~~GAvLV~Y~GS~f---~~~~~~~~i~Q~R~~~~~vTV 73 (154) T protein:vir:10 1 MATTLEMVDAIVARLRVKLPALV----TEYFPERPDEYRLNHAIGALLVSYPGSQY---DTTVDTDMVVQPRRVKFAVAI 73 (154) T ss_pred CchhHHHHHHHHHHHHHhCCcce----EeeCCCChhHcCCCCCceeEEEEecCccc---CCcccCCceeeeeEEEEEEEE Confidence 666554 5789999999999986 3445554555566677 55666666554 445688999999999999999 Q ss_pred EEeccCCccchhHHHHHHHHHHHHHHHHcCCCCCCCCCccceEEcCCeeeeecCcEEEEEEEeEEeeEecccC Q lcl|Aclame:pro 82 AVRNYRDNKGVTAADDLRPVLGDVRKALIGWTPPGLAGARDCQLVQGQVVDYDASVLIWTDLYQTQHAIGRTS 154 (154) Q Consensus 82 vvr~~~~~~G~~a~~~~~~l~~~v~~AL~GW~P~~~~g~~pi~~~~g~l~~~~~g~~~y~~~F~~~~~i~r~~ 154 (154) ++|+.++..|+- .++++||.+|.||+|++| +|++.++.++++.++|.|.|+++|.++...=... T Consensus 74 i~r~l~g~~gal------~~LD~vR~aL~Gf~ppdc---~~~~lv~d~f~ge~~G~W~Y~l~~at~t~~Ve~~ 137 (154) T protein:vir:10 74 VLRQLNGRGGAI------DVLDHVRTALVGFRPPDC---KKLAAVSDKFLGESAGLWQYVIEFSAGAVIVEDA 137 (154) T ss_pred EeeccCCcchhh------HHHHHHHHHHhccccCCC---ceeehhhhcccccccceeeeeeeeccchhhhhcc Confidence 999998766653 479999999999999986 6899999999999999999999999965443333 No 10 >protein:vir:1994 Length: 182 # NCBI annotation: Hypothetical protein # Family: family:all:1387 # MgeID: mge:320 # MgeName: Mu # Cross-refs: genbank:acc:NP_050641;genbank:gi:9633528;genbank:GeneID:2636286 Probab=98.13 E-value=1e-07 Score=58.90 Aligned_cols=133 Identities=13% Similarity=0.200 Sum_probs=91.4 Q ss_pred cccccchhHHHHHHHHhC-Ccchhhhc-ccchH--HHHhhhCCCCCeEEEEeccccCCCCCCcccccceeEEeeeEEEEE Q lcl|Aclame:pro 5 LCAPFDHNLVIERLRDQV-KVLKHVGG-AAELG--TITQLRDFRTPAAYVLLAQETLSPKPAGHAGGATRQMANVHFAIT 80 (154) Q Consensus 5 m~~pf~l~~ii~rLra~~-p~~~~V~~-aa~la--~~~~~~~~~~PaayVi~~~d~~~~~~~~~~~g~~~Q~~~~~~~Vv 80 (154) |..= +-++|++|||+.+ |.++.|++ +.+|. ++.... ...||+||.+.|...+++ +-.++-+|.|. T Consensus 1 mI~~-iEdAi~~rl~~~~g~~v~~V~sy~Gefd~e~l~~~~-~~~PAv~Va~~G~~~~~~---------r~~~~~r~~v~ 69 (182) T protein:vir:19 1 MLEE-TEAALLARVRELFGATLRQVEPLTGTWTNEDVHRLF-LAPPSVFLAWMGCGEGRT---------RREVESRWAFF 69 (182) T ss_pred ChHH-HHHHHHHHHHHHhhhhhhhhccCCCCCChhhhhHhh-hcCceeEEEeccccCcCC---------ceeeeeEEEEE Confidence 5444 4578999999887 88888876 33554 344433 358999999988654331 22467789999 Q ss_pred EEEeccCCccchhHH-HHHHHHHHHHHHHHcCCCCCCCCCccceEEcCCeee----eecCcEEEEEEEeEEeeEecccC Q lcl|Aclame:pro 81 VAVRNYRDNKGVTAA-DDLRPVLGDVRKALIGWTPPGLAGARDCQLVQGQVV----DYDASVLIWTDLYQTQHAIGRTS 154 (154) Q Consensus 81 vvvr~~~~~~G~~a~-~~~~~l~~~v~~AL~GW~P~~~~g~~pi~~~~g~l~----~~~~g~~~y~~~F~~~~~i~r~~ 154 (154) |+.|+.+ |..+. .-+-.++..|++.|.|-..+. ..|+....-+-+ .-..|...|..+|+.++.+..-. T Consensus 70 V~a~~~~---g~~~~rvG~y~lv~~v~~lL~~q~~g~---~~~l~p~~vrnL~s~~~~~~gvsvyavef~~~~~lp~~~ 142 (182) T protein:vir:19 70 VVAELLN---GEPVNRPGIYQIVERLIAGVNGQTFGP---TTGMRLTQVRNLCDDNRINAGVVLYGVLFSGTTPLPSVV 142 (182) T ss_pred EEecCCC---ChhhhhhhHHHHHHHHHHHHhccCCCC---ccccccceeeeeechhhhhCceEEEEEEeeccccCCCcC Confidence 9988765 43333 356789999999999855542 245665554443 23578999999999998886432 No 11 >protein:vir:10327 Length: 182 # NCBI annotation: ORF29 # Family: family:all:1090 # MgeID: mge:182 # MgeName: VHML # Cross-refs: genbank:acc:NP_758922;genbank:gi:27311196;genbank:GeneID:956141 Probab=97.76 E-value=3.4e-06 Score=50.57 Aligned_cols=133 Identities=9% Similarity=0.014 Sum_probs=82.8 Q ss_pred cccccch----hHHHHHHHHhCCcchhhhcccchHHHHhhhCCCCCeEEEEeccccCCCCCCcccccceeEEeeeEEEEE Q lcl|Aclame:pro 5 LCAPFDH----NLVIERLRDQVKVLKHVGGAAELGTITQLRDFRTPAAYVLLAQETLSPKPAGHAGGATRQMANVHFAIT 80 (154) Q Consensus 5 m~~pf~l----~~ii~rLra~~p~~~~V~~aa~la~~~~~~~~~~PaayVi~~~d~~~~~~~~~~~g~~~Q~~~~~~~Vv 80 (154) |.. .+| ++|++.||+++|.++.+..- .. ...++.+||++|=..+-..+.. .++|-+ .++.+|.+- T Consensus 1 mt~-~~l~~lh~AI~~~Lk~~~p~l~~~~~y---~~--~~~~i~~PAv~vel~~~~~~~d---~~tGq~--~~~~~~~a~ 69 (182) T protein:vir:10 1 MSQ-TTITEVHEAIKAKLRETFPKVTVDDYN---PE--PELSVLAPALLLELEEFPMGAD---VGDDRY--PAACRFSVH 69 (182) T ss_pred CCc-CCHHHHHHHHHHHHHHhcCCceeeecC---cc--ccCccccceeeeeeecCCcCCC---CCCCcE--EEEEEEEEE Confidence 555 555 67999999999998644321 11 2355789999988776544321 233433 478899999 Q ss_pred EEEeccCCccchhHHHHHHHHHHHHHHHHcC--CC-CCCCCCccceEEcCCeeeee----cCcEEEEEEEeEEeeEeccc Q lcl|Aclame:pro 81 VAVRNYRDNKGVTAADDLRPVLGDVRKALIG--WT-PPGLAGARDCQLVQGQVVDY----DASVLIWTDLYQTQHAIGRT 153 (154) Q Consensus 81 vvvr~~~~~~G~~a~~~~~~l~~~v~~AL~G--W~-P~~~~g~~pi~~~~g~l~~~----~~g~~~y~~~F~~~~~i~r~ 153 (154) +++...... +..++..+-.+|.+.+.| |- |+++ ..|-+++..+-..+ .+|...|..+|+=+.+||.+ T Consensus 70 ~vv~~~~~~----~~~~~~~lAa~l~~~v~~~~wGL~~~~--v~~a~~i~a~p~~f~~~~~dgy~vW~VeW~Q~i~LG~s 143 (182) T protein:vir:10 70 CVLGWEVKS----LALELWEFSAAVAQLIRKSGVWVKGGV--LTKPEGLEVYPGSFRKDTQQGYDSRVVTWNQTLYLGES 143 (182) T ss_pred EEecccCCC----chHHHHHHHHHHHHHHhcCcccCCccc--cCccceeeeccCccChhhcCceEEEEEEEEEEEeeCCc Confidence 988754322 222344444444444444 43 4332 24455554443333 37899999999999999998 Q ss_pred C Q lcl|Aclame:pro 154 S 154 (154) Q Consensus 154 ~ 154 (154) - T Consensus 144 ~ 144 (182) T protein:vir:10 144 M 144 (182) T ss_pred c Confidence 7 No 12 >protein:vir:96764 Length: 177 # NCBI annotation: putative phage-related protein # Family: family:all:1090 # MgeID: mge:1628 # MgeName: VP882 # Cross-refs: genbank:acc:YP_001039825;genbank:gi:126010857;genbank:GeneID:5076274 Probab=97.33 E-value=2.2e-05 Score=46.07 Aligned_cols=137 Identities=10% Similarity=0.112 Sum_probs=84.3 Q ss_pred Cccccccccch-hHHHHHHHHhCCcchhhhcccchHHHHhhhCCCCCeEEEEeccccCCCCCCcccccceeEEeeeEEEE Q lcl|Aclame:pro 1 MADGLCAPFDH-NLVIERLRDQVKVLKHVGGAAELGTITQLRDFRTPAAYVLLAQETLSPKPAGHAGGATRQMANVHFAI 79 (154) Q Consensus 1 ~~~~m~~pf~l-~~ii~rLra~~p~~~~V~~aa~la~~~~~~~~~~PaayVi~~~d~~~~~~~~~~~g~~~Q~~~~~~~V 79 (154) |. .+.+|=++ ++|++.||+++|.++.|+.= ....+ .++.+||++|=..+..++. +.++|-+ .+.-+|.+ T Consensus 1 ~~-~l~~~s~lh~AI~~~l~~~~P~l~tV~~y---~~~~~-~~~~tPAv~iel~~~~~~~---d~g~G~~--~~~~r~~a 70 (177) T protein:vir:96 1 MV-TLKQPSDLYDAIQAELESRLADEVTVASY---ADFGD-VQVVDAMVLIEFEQTSPAT---RGHDGRY--CHQYDITL 70 (177) T ss_pred CC-ccchhHHHHHHHHHHHHHhCccceeeccc---ccccc-ccccCceeEEeeccCCccc---CCCCCce--EEEEEEEE Confidence 32 34454444 68999999999999877643 33322 3456899998765555432 2234433 26777877 Q ss_pred EEEEeccCCccchhHHHHHHHHHHHHHHHHcC--CCC--CCCCCccceEEcCCe---eeeecCcEEEEEEEeEEeeEecc Q lcl|Aclame:pro 80 TVAVRNYRDNKGVTAADDLRPVLGDVRKALIG--WTP--PGLAGARDCQLVQGQ---VVDYDASVLIWTDLYQTQHAIGR 152 (154) Q Consensus 80 vvvvr~~~~~~G~~a~~~~~~l~~~v~~AL~G--W~P--~~~~g~~pi~~~~g~---l~~~~~g~~~y~~~F~~~~~i~r 152 (154) -+++..... .+.-++..+-.+|-+.|.| |-. +.+ +|-+++++. +-.--+|...|..+|+=...||. T Consensus 71 ~vvv~~~~~----~~~l~a~~lAa~l~~~v~~~~wGLp~~~v---~~~~~i~a~pd~f~p~ldgy~vW~Vew~Q~i~LG~ 143 (177) T protein:vir:96 71 HAVVGRQRQ----RAELEAINLAAAIERVTDENLWGLPYQQV---DRPENIRSAPSMFKVGSDGYDAWGVSFRQRIYLGA 143 (177) T ss_pred EEEeCCCCC----ChHHHHHHHHHHHHHHHhcccccCCcccc---ccceeeeccccccccccCceeEEEEEEEEEEecCC Confidence 777754322 3334555666666666655 543 223 343333333 22234689999999999999999 Q ss_pred cC Q lcl|Aclame:pro 153 TS 154 (154) Q Consensus 153 ~~ 154 (154) +- T Consensus 144 s~ 145 (177) T protein:vir:96 144 SL 145 (177) T ss_pred Cc Confidence 87 No 13 >protein:vir:93602 Length: 114 # NCBI annotation: putative structural component # Family: family:all:896 # MgeID: mge:157 # MgeName: phi 4795 # Cross-refs: genbank:acc:YP_001449300;genbank:gi:157166048;uniprot:Q6H9U1;genbank:GeneID:5580424 Probab=60.03 E-value=0.38 Score=22.88 Aligned_cols=113 Identities=15% Similarity=0.175 Sum_probs=58.8 Q ss_pred cccccchhHHHHHHHHhCCcchhhhcccchHHHHh-hhCCCCCeEEEEeccccCCCCCCcccccceeEEeeeEEEEEEEE Q lcl|Aclame:pro 5 LCAPFDHNLVIERLRDQVKVLKHVGGAAELGTITQ-LRDFRTPAAYVLLAQETLSPKPAGHAGGATRQMANVHFAITVAV 83 (154) Q Consensus 5 m~~pf~l~~ii~rLra~~p~~~~V~~aa~la~~~~-~~~~~~PaayVi~~~d~~~~~~~~~~~g~~~Q~~~~~~~Vvvvv 83 (154) |.+. -|.+.|..-+++ ||+- ++ .++ ..+..+|.-|+++..-.. .+.....|. . ..++.|=|-| T Consensus 1 M~e~----~i~~lL~~~~~g--Rvyp--~~--~P~~~~~~~~~~Pyiv~q~vsg--~p~~~l~gp---~-~~~~~vQIDv 64 (114) T protein:vir:93 1 MTEA----DLYPHLAHLAGG--QVYP--YV--VPLLDGRPSVALPWVVFSLISS--VSADVMGGQ---A-ESSVSVQIDV 64 (114) T ss_pred CchH----HHHHHHHhhcCc--cccc--cc--CCcccCcCCccCceEEEEeccC--cccccccCc---c-ccceEEEEEe Confidence 7764 233344332232 5652 11 111 122224555666654322 222222332 1 1233333332 Q ss_pred eccCCccchhHHHHHHHHHHHHHHHHcCCCCCCCCCccceEEcCCeeeeecCcEEEEEEEeEEeeEe Q lcl|Aclame:pro 84 RNYRDNKGVTAADDLRPVLGDVRKALIGWTPPGLAGARDCQLVQGQVVDYDASVLIWTDLYQTQHAI 150 (154) Q Consensus 84 r~~~~~~G~~a~~~~~~l~~~v~~AL~GW~P~~~~g~~pi~~~~g~l~~~~~g~~~y~~~F~~~~~i 150 (154) ++ +..+++..++++|+.||..|.|. ...++. +|+...-+|+..|...-.+ T Consensus 65 --yA-----~t~~~A~~l~~~v~~Al~~~~~~--------~~~~~~--~ye~dt~lyR~~~d~~v~~ 114 (114) T protein:vir:93 65 --YA-----GTVTQARQIRQDAREAIMLLAPG--------SVSEMQ--DYIPENRCYRATLEFQVTV 114 (114) T ss_pred --ee-----CCHHHHHHHHHHHHHHHhhcCcE--------eecCCC--cccccccceeeEEEEEEeC Confidence 22 23467789999999999877763 223333 6888888888888877777 No 14 >protein:vir:4348 Length: 121 # NCBI annotation: Orf15 # Family: family:all:896 # MgeID: mge:93 # MgeName: D3 # Cross-refs: genbank:acc:NP_061511;genbank:gi:9635607;genbank:GeneID:1262874 Probab=57.14 E-value=0.44 Score=22.53 Aligned_cols=116 Identities=16% Similarity=0.177 Sum_probs=59.3 Q ss_pred cccccchhHHHHHHHHhCCcchhhhccc-----chHHHHhhhCCCCCeEEEEeccccCCCCCCcccccceeEEeeeEEEE Q lcl|Aclame:pro 5 LCAPFDHNLVIERLRDQVKVLKHVGGAA-----ELGTITQLRDFRTPAAYVLLAQETLSPKPAGHAGGATRQMANVHFAI 79 (154) Q Consensus 5 m~~pf~l~~ii~rLra~~p~~~~V~~aa-----~la~~~~~~~~~~PaayVi~~~d~~~~~~~~~~~g~~~Q~~~~~~~V 79 (154) |.+| |-+-|++ =|.++.+.+.. .|...++ . +|.-||++..-...+ .....|. .-.++..| T Consensus 1 m~~~-----i~~~l~~-d~~v~allg~~~~Rvyp~~~aP~-~---~~~Pyiv~q~vsg~p--~~~l~g~---~~~~~~~v 65 (121) T protein:vir:43 1 MYPP-----IFKVCSS-SPAVTAILGASPLRMYQFGLAPQ-L---VVKPYATWQTISGSP--ENYLWGR---PDADGFTI 65 (121) T ss_pred CChH-----HHHHHhh-ChhhhhhhcCCCceeeccCCCCC-C---CcCCeEEEEEecCcc--cceecCC---CCcceeEE Confidence 8777 6555653 44454322221 1211122 1 333477776433222 1111111 11222222 Q ss_pred EEEEeccCCccchhHHHHHHHHHHHHHHHHcCCCCCCCCCccceEEcCCeeeeecCcEEEEEEEeEEeeEecc Q lcl|Aclame:pro 80 TVAVRNYRDNKGVTAADDLRPVLGDVRKALIGWTPPGLAGARDCQLVQGQVVDYDASVLIWTDLYQTQHAIGR 152 (154) Q Consensus 80 vvvvr~~~~~~G~~a~~~~~~l~~~v~~AL~GW~P~~~~g~~pi~~~~g~l~~~~~g~~~y~~~F~~~~~i~r 152 (154) =|-|- + +..+++..|.++|+.||-+=.+ +...++ -+|+...-+|+-.|..+.++.| T Consensus 66 QIDvy--A-----~t~~~A~~l~~av~~Al~~~~~--------~~~~~~--~~ye~dT~lyR~s~Dv~w~~~r 121 (121) T protein:vir:43 66 QVDIF--S-----ATAAEARDAAKAIRDAIELSAY--------VVRWGG--ESVDPDTKTYRVSFDVDWIVQR 121 (121) T ss_pred EEEee--e-----CCHHHHHHHHHHHHHHhhhcCC--------cccCCC--CCCcccccceeeeeEEEEeecC Confidence 23322 1 2235567888899999975222 112223 3687888889999999999999 No 15 >protein:vir:1892 Length: 121 # NCBI annotation: gp11 # Family: family:all:896 # MgeID: mge:41 # MgeName: HK022 # Cross-refs: genbank:acc:NP_037672;genbank:gi:9634130;genbank:GeneID:1262490 Probab=41.67 E-value=0.92 Score=20.79 Aligned_cols=116 Identities=16% Similarity=0.200 Sum_probs=60.4 Q ss_pred cccccchhHHHHHHHHhCCcchhhhccc-----chHHHHhhhCCCCCeEEEEeccccCCCCCCcccccceeEEeeeEEEE Q lcl|Aclame:pro 5 LCAPFDHNLVIERLRDQVKVLKHVGGAA-----ELGTITQLRDFRTPAAYVLLAQETLSPKPAGHAGGATRQMANVHFAI 79 (154) Q Consensus 5 m~~pf~l~~ii~rLra~~p~~~~V~~aa-----~la~~~~~~~~~~PaayVi~~~d~~~~~~~~~~~g~~~Q~~~~~~~V 79 (154) |..| |-+-|++ -|+++.+.+.. .|...++ .+|.-||++..-...+ ...-.| +.-.+++.| T Consensus 1 m~~~-----i~~~l~~-d~~v~allg~~~~Rvyp~~~aP~----~~~~Pyiv~q~vsg~p--~~~l~G---~~~~~~~~v 65 (121) T protein:vir:18 1 MIAP-----IFSVCAS-SPEVTDLLGSNPVRIYPFGIQDD----NVVYPYVVWQNITGSP--ENYIAQ---RPDADFFTL 65 (121) T ss_pred CchH-----HHHHHhc-ChhhhhhhcCCCceeeeccCCCC----cCcCCeEEEEEecCcc--cceecC---CCCcceeEE Confidence 7777 6666653 46665333322 1211222 2344477776432222 111111 122223333 Q ss_pred EEEEeccCCccchhHHHHHHHHHHHHHHHHcCCCCCCCCCccceEEcCCeeeeecCcEEEEEEEeEEeeEecc Q lcl|Aclame:pro 80 TVAVRNYRDNKGVTAADDLRPVLGDVRKALIGWTPPGLAGARDCQLVQGQVVDYDASVLIWTDLYQTQHAIGR 152 (154) Q Consensus 80 vvvvr~~~~~~G~~a~~~~~~l~~~v~~AL~GW~P~~~~g~~pi~~~~g~l~~~~~g~~~y~~~F~~~~~i~r 152 (154) =|-|- + +..+++..+.++|+.||-+ . + + ....++. +|+...-+|+..|.+.+++.| T Consensus 66 QIDvy--A-----~t~~~A~~l~~avr~Ale~---~-~--~--~~~~~~~--~ye~dT~lyR~s~Dv~~~~~r 121 (121) T protein:vir:18 66 QVDAY--A-----DTVDEVIAVATALRDAIEP---H-A--H--ITRWGGQ--ERDPETKRYRYSFDVDWIVTR 121 (121) T ss_pred EEEee--c-----CCHHHHHHHHHHHHHHhhh---c-C--c--ccCCCCC--CCcccccceeeeeEEEEeecC Confidence 33332 2 1234566888889999854 1 1 1 2222333 788888889999999999999 No 16 >protein:vir:9824 Length: 132 # NCBI annotation: putative minor capsid protein # Family: family:all:1267 # MgeID: mge:176 # MgeName: 315.4 # Cross-refs: genbank:acc:NP_795586;genbank:gi:28876335;genbank:GeneID:1257908 Probab=27.71 E-value=1.8 Score=19.16 Aligned_cols=122 Identities=16% Similarity=0.171 Sum_probs=60.5 Q ss_pred cccccchhHHHHHHHHhCCcchhhhcccchHHHHhhhCCCCC----eEEEEeccccCCCCCCcccccceeEEeeeEEEEE Q lcl|Aclame:pro 5 LCAPFDHNLVIERLRDQVKVLKHVGGAAELGTITQLRDFRTP----AAYVLLAQETLSPKPAGHAGGATRQMANVHFAIT 80 (154) Q Consensus 5 m~~pf~l~~ii~rLra~~p~~~~V~~aa~la~~~~~~~~~~P----aayVi~~~d~~~~~~~~~~~g~~~Q~~~~~~~Vv 80 (154) |.+- .++||++.+-++ +|.--....-+ .| +.|-+|.+....+ ..++. |... +--= T Consensus 1 ~~~D-----f~e~L~~~In~l-------~LP~k~~~~yL-~~~esl~iyp~PGs~v~~e---y~dG~---~e~~--l~fe 59 (132) T protein:vir:98 1 MTND-----FATVLRQFVEGL-------DLGIKPRLDYL-TRQEDLAIYPMPGGKVNNE---YMDGT---REIS--LPFE 59 (132) T ss_pred Cchh-----HHHHHHHHhccc-------CCCceeeeccc-CCCccEEEeecCCCccccc---ccCce---eEEE--EeeE Confidence 6665 567887644222 33311111112 22 4555665554443 22322 3333 3335 Q ss_pred EEEeccCCccchhHHHHHHHHHHHHHHHHcCCCCCCCCCccceEEcCCe-----eeee-cCcEEEEEEEeEEeeEecccC Q lcl|Aclame:pro 81 VAVRNYRDNKGVTAADDLRPVLGDVRKALIGWTPPGLAGARDCQLVQGQ-----VVDY-DASVLIWTDLYQTQHAIGRTS 154 (154) Q Consensus 81 vvvr~~~~~~G~~a~~~~~~l~~~v~~AL~GW~P~~~~g~~pi~~~~g~-----l~~~-~~g~~~y~~~F~~~~~i~r~~ 154 (154) |+.|.- ..+.|. +.+=.|-..|.-..++-.+.-.-+.|.+=+ ..+- ..|..+|.++|++.-.|.||| T Consensus 60 Ia~ktK---~~~~a~----~tLw~Is~~Ld~~~~~l~S~n~Sf~F~~lev~~P~i~~~D~QG~~iYlld~~v~i~ie~~~ 132 (132) T protein:vir:98 60 IAIKTK---NQELAS----TVMWTINSALSNFDLKLPSLNHSYTFISLDVEKPFLNDLSDQGFYIYVLDITAHLEIEGNN 132 (132) T ss_pred eecccc---chhHHH----HHHHHHHHHHhhcCCcCcccCCcEEecceeeccceeeeeecCceEEEEEEEEEEEEEeeCC Confidence 566542 233333 333444444444443322222234443322 1222 479999999999999999999 No 17 >protein:vir:3037 Length: 132 # NCBI annotation: minor capsid protein # Family: family:all:1267 # MgeID: mge:61 # MgeName: PhiNIH1.1 # Cross-refs: genbank:acc:NP_438150;genbank:gi:16271813;genbank:GeneID:929243 Probab=27.71 E-value=1.8 Score=19.16 Aligned_cols=122 Identities=16% Similarity=0.171 Sum_probs=60.5 Q ss_pred cccccchhHHHHHHHHhCCcchhhhcccchHHHHhhhCCCCC----eEEEEeccccCCCCCCcccccceeEEeeeEEEEE Q lcl|Aclame:pro 5 LCAPFDHNLVIERLRDQVKVLKHVGGAAELGTITQLRDFRTP----AAYVLLAQETLSPKPAGHAGGATRQMANVHFAIT 80 (154) Q Consensus 5 m~~pf~l~~ii~rLra~~p~~~~V~~aa~la~~~~~~~~~~P----aayVi~~~d~~~~~~~~~~~g~~~Q~~~~~~~Vv 80 (154) |.+- .++||++.+-++ +|.--....-+ .| +.|-+|.+....+ ..++. |... +--= T Consensus 1 ~~~D-----f~e~L~~~In~l-------~LP~k~~~~yL-~~~esl~iyp~PGs~v~~e---y~dG~---~e~~--l~fe 59 (132) T protein:vir:30 1 MTND-----FATVLRQFVEGL-------DLGIKPRLDYL-TRQEDLAIYPMPGGKVNNE---YMDGT---REIS--LPFE 59 (132) T ss_pred Cchh-----HHHHHHHHhccc-------CCCceeeeccc-CCCccEEEeecCCCccccc---ccCce---eEEE--EeeE Confidence 6665 567887644222 33311111112 22 4555665554443 22322 3333 3335 Q ss_pred EEEeccCCccchhHHHHHHHHHHHHHHHHcCCCCCCCCCccceEEcCCe-----eeee-cCcEEEEEEEeEEeeEecccC Q lcl|Aclame:pro 81 VAVRNYRDNKGVTAADDLRPVLGDVRKALIGWTPPGLAGARDCQLVQGQ-----VVDY-DASVLIWTDLYQTQHAIGRTS 154 (154) Q Consensus 81 vvvr~~~~~~G~~a~~~~~~l~~~v~~AL~GW~P~~~~g~~pi~~~~g~-----l~~~-~~g~~~y~~~F~~~~~i~r~~ 154 (154) |+.|.- ..+.|. +.+=.|-..|.-..++-.+.-.-+.|.+=+ ..+- ..|..+|.++|++.-.|.||| T Consensus 60 Ia~ktK---~~~~a~----~tLw~Is~~Ld~~~~~l~S~n~Sf~F~~lev~~P~i~~~D~QG~~iYlld~~v~i~ie~~~ 132 (132) T protein:vir:30 60 IAIKTK---NQELAS----TVMWTINSALSNFDLKLPSLNHSYTFISLDVEKPFLNDLSDQGFYIYVLDITAHLEIEGNN 132 (132) T ss_pred eecccc---chhHHH----HHHHHHHHHHhhcCCcCcccCCcEEecceeeccceeeeeecCceEEEEEEEEEEEEEeeCC Confidence 566542 233333 333444444444443322222234443322 1222 479999999999999999999 No 18 >protein:vir:97211 Length: 150 # NCBI annotation: hypothetical protein ORF026 # Family: family:all:5248 # MgeID: mge:1657 # MgeName: M6 # Cross-refs: genbank:acc:YP_001294534;genbank:gi:149408255;genbank:GeneID:5237076 Probab=24.80 E-value=2.1 Score=18.78 Aligned_cols=135 Identities=10% Similarity=0.054 Sum_probs=68.6 Q ss_pred cccccchhHHHHHHHHhCCcc-hhhhcccchHHHHhhh---------CC-CCC---eEEEEeccccCCCCCCccccccee Q lcl|Aclame:pro 5 LCAPFDHNLVIERLRDQVKVL-KHVGGAAELGTITQLR---------DF-RTP---AAYVLLAQETLSPKPAGHAGGATR 70 (154) Q Consensus 5 m~~pf~l~~ii~rLra~~p~~-~~V~~aa~la~~~~~~---------~~-~~P---aayVi~~~d~~~~~~~~~~~g~~~ 70 (154) |.-| --+..|+++=.+ .-.- .++.+++.-.. +. +.| +.||=..--.... .+.+.|.-- T Consensus 1 ~~~~-----tF~qaR~ei~t~f~~~W-~a~~~a~~g~~p~~~~w~~~~~~~~P~g~~~WaRLti~~~~~--~~as~G~~~ 72 (150) T protein:vir:97 1 MTLP-----TFDSARDEILGLFNTKW-ITDTPALNGGAPIRVEWPGVDAGDPPPADKPYARITLRHTTS--RQATFGPTG 72 (150) T ss_pred CCCC-----cHHHHHHHHHhhhhhhc-cccchhhcCCcceeeccCCcccCCCcCCCCceEEEEeecccc--ccccccCCC Confidence 5555 223344332221 1111 12222221100 00 112 1233221101111 112223334 Q ss_pred EEeeeEEEEEEEEeccCCc-cchhHHHHHHHHHHHHHHHHcCCCCCCCCCccceEEcCCeeeeecCcEEEEEEEeEEeeE Q lcl|Aclame:pro 71 QMANVHFAITVAVRNYRDN-KGVTAADDLRPVLGDVRKALIGWTPPGLAGARDCQLVQGQVVDYDASVLIWTDLYQTQHA 149 (154) Q Consensus 71 Q~~~~~~~Vvvvvr~~~~~-~G~~a~~~~~~l~~~v~~AL~GW~P~~~~g~~pi~~~~g~l~~~~~g~~~y~~~F~~~~~ 149 (154) |+...+.++++|== .--. .| ..+..+..+-+.++++.-||.-+ + -|+|.+.......+...||++.-.++|. T Consensus 73 gr~~~r~Gli~VQi-F~p~~~G-~G~~la~~~Ad~a~eaFe~~~t~---g--~i~f~~a~~~eig~~~gWyQ~Nv~i~Fe 145 (150) T protein:vir:97 73 GRRFTRPGLITVQV-FTPLSGG-QGLSLAEKCAIIARDAFEGRGTA---S--GIWFRNARIQEIGPDGAWYQMNVVVEFE 145 (150) T ss_pred CcEEeeCcEEEEEE-eeeccCC-chhhHHHHHHHHHHHHHhccCCc---C--CeecccccccccCCCCceEEEEeEeeee Confidence 56667777766521 1111 13 44466777888899999999632 1 1888888888887777999999999998 Q ss_pred ecccC Q lcl|Aclame:pro 150 IGRTS 154 (154) Q Consensus 150 i~r~~ 154 (154) ..+-- T Consensus 146 yde~r 150 (150) T protein:vir:97 146 YDELR 150 (150) T ss_pred ccccC Confidence 87766 Done!