Query lcl|Aclame:protein:vir:102644|NCBI_annot:Hypothetical protein|genbank:acc:YP_024422;genbank:gi:48696643;genbank:GeneID:2948111 Match_columns 594 No_of_seqs 219 out of 316 Neff 8.2 Searched_HMMs 1612 Date Sat Nov 30 22:13:37 2013 Command /home/guerois/workspace/virfam/python/lib/hhsearch//hhsearch2 -i .//seq/seq_18 -d /home/guerois/workspace/virfam/python/profile_database/capsid_neck_tail.hhm -glob -cpu 7 -o .//seq/HHR/seq_18_vs_rec_db.hhr No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM 1 protein:vir:102644 Length: 594 100.0 2E-200 1E-203 1115.7 65.3 594 1-594 1-594 (594) 2 protein:vir:98487 Length: 681 100.0 5E-184 3E-187 1025.4 65.6 568 1-593 1-681 (681) 3 protein:vir:107423 Length: 681 100.0 5E-184 3E-187 1025.4 65.6 568 1-593 1-681 (681) 4 protein:vir:107802 Length: 681 100.0 5E-184 3E-187 1025.4 65.6 568 1-593 1-681 (681) 5 protein:vir:7329 Length: 825 # 100.0 1E-180 8E-184 1006.8 63.4 570 1-594 1-825 (825) 6 protein:vir:95324 Length: 823 100.0 7E-174 5E-177 969.8 63.9 570 1-594 1-823 (823) 7 protein:vir:103790 Length: 768 100.0 2E-170 1E-173 951.0 65.0 573 1-594 1-767 (768) 8 protein:vir:99677 Length: 794 100.0 4E-136 2E-139 763.1 63.5 559 1-594 1-790 (794) 9 protein:vir:94713 Length: 785 100.0 2E-135 1E-138 758.7 62.5 557 1-594 1-781 (785) 10 protein:vir:94583 Length: 792 100.0 2E-135 1E-138 759.6 60.5 559 1-594 1-788 (792) 11 protein:vir:80253 Length: 777 100.0 2E-134 1E-137 753.4 60.4 552 1-594 1-773 (777) 12 protein:vir:2203 Length: 794 # 100.0 2E-131 1E-134 737.0 61.4 560 1-594 1-790 (794) 13 protein:vir:10452 Length: 794 100.0 1E-130 6E-134 733.4 62.1 560 1-594 1-790 (794) 14 protein:vir:6326 Length: 826 # 100.0 7E-129 4E-132 723.2 61.2 558 1-594 1-822 (826) 15 protein:vir:78957 Length: 826 100.0 4E-129 2E-132 724.8 58.7 557 1-594 1-822 (826) 16 protein:vir:1543 Length: 801 # 100.0 2E-128 1E-131 720.8 62.5 560 1-594 1-797 (801) 17 protein:vir:8887 Length: 808 # 100.0 4E-127 3E-130 713.4 61.9 557 1-594 1-804 (808) 18 protein:vir:3366 Length: 801 # 100.0 9E-127 5E-130 711.7 60.1 555 1-594 1-797 (801) 19 protein:vir:97014 Length: 800 100.0 2E-125 1E-128 704.0 60.2 555 1-594 1-796 (800) 20 protein:vir:7021 Length: 803 # 100.0 8E-123 5E-126 690.1 58.8 559 1-594 1-799 (803) 21 protein:vir:105647 Length: 800 100.0 5E-121 3E-124 680.0 60.4 559 1-594 1-796 (800) 22 protein:vir:103341 Length: 806 100.0 2E-118 1E-121 665.5 59.6 564 1-594 1-802 (806) 23 protein:vir:100022 Length: 976 100.0 5E-99 3E-102 559.5 60.0 558 1-594 325-971 (976) 24 protein:vir:78703 Length: 905 100.0 4.4E-99 3E-102 559.8 58.0 558 1-594 265-900 (905) 25 protein:vir:1778 Length: 680 # 100.0 6E-66 3.7E-69 378.1 35.0 354 1-373 261-680 (680) 26 protein:vir:94602 Length: 1012 99.5 2.9E-14 1.8E-17 94.8 27.0 567 1-594 289-1006(1012) 27 protein:vir:2625 Length: 715 # 99.5 2.2E-12 1.4E-15 84.5 35.4 540 1-594 1-714 (715) 28 protein:vir:3133 Length: 911 # 99.5 9.7E-13 6E-16 86.5 32.3 503 1-594 212-817 (911) 29 protein:vir:8837 Length: 513 # 99.4 2.3E-11 1.4E-14 78.9 41.7 484 1-594 1-511 (513) 30 protein:vir:95475 Length: 771 99.4 2.8E-11 1.7E-14 78.5 38.5 547 1-594 1-770 (771) 31 protein:vir:80177 Length: 1027 99.4 1.7E-12 1.1E-15 85.1 24.4 560 1-594 278-1000(1027) 32 protein:vir:108312 Length: 458 96.1 0.0011 6.6E-07 36.9 34.8 432 1-590 1-458 (458) 33 protein:vir:1778 Length: 680 # 92.1 0.013 7.9E-06 31.0 22.9 534 1-594 1-653 (680) 34 protein:vir:105563 Length: 396 91.3 0.016 1E-05 30.4 14.2 307 1-344 1-396 (396) 35 protein:vir:105525 Length: 472 91.2 0.017 1E-05 30.3 31.3 438 1-588 1-472 (472) 36 protein:vir:2109 Length: 472 # 86.7 0.044 2.7E-05 28.0 36.8 447 1-590 1-472 (472) 37 protein:vir:352 Length: 536 # 81.9 0.081 5E-05 26.6 31.0 455 1-522 2-536 (536) 38 protein:vir:9268 Length: 472 # 77.6 0.12 7.6E-05 25.6 36.3 447 1-590 1-472 (472) 39 protein:vir:100960 Length: 472 75.8 0.14 8.9E-05 25.2 36.6 438 1-590 1-472 (472) 40 protein:vir:3529 Length: 477 # 61.4 0.35 0.00022 23.1 35.1 446 1-588 7-477 (477) 41 protein:vir:78703 Length: 905 60.7 0.37 0.00023 23.0 33.3 530 1-594 1-642 (905) No 1 >protein:vir:102644 Length: 594 # NCBI annotation: Hypothetical protein # Family: family:all:780 # MgeID: mge:1624 # MgeName: VP2 # Cross-refs: genbank:acc:YP_024422;genbank:gi:48696643;genbank:GeneID:2948111 Probab=100.00 E-value=1.8e-200 Score=1115.72 Aligned_cols=594 Identities=100% Similarity=1.479 Sum_probs=571.5 Q ss_pred CCcccccccccceecchhcccchHHHHHHHHHhhcCcEEeecCCceecCcceeeeeeeCCCCCEEEEEEEeCCCceEEEE Q lcl|Aclame:pro 1 MADFSQTSFKGGVIAPRLQFNEYESAYHHSIEDAVNFVVTEQGSLITRCGSEEVGLCQDGEVRLFRLPAVDAPSNDVIVE 80 (594) Q Consensus 1 m~~~~~~~f~~Ge~sp~l~~r~d~~~y~~~~~~~~N~~~~~~G~~~~rpg~~~~~~~~~~~~~~rlipF~~s~~q~y~le 80 (594) ||+++|+||++|||||+|+||+||++|++||++||||+|+||||++|||||+|++.+|++++++|||||+||++|+|+|| T Consensus 1 m~~~~~~~F~~GelsP~l~~r~Dl~~y~~~~~~~~n~~~~~~G~~~rR~G~~~~~~~~~~~~~~~lipF~~s~~~~~~le 80 (594) T protein:vir:10 1 MADFSQTSFKGGVIAPRLQFNEYESAYHHSIEDAVNFVVTEQGSLITRCGSEEVGLCQDGEVRLFRLPAVDAPSNDVIVE 80 (594) T ss_pred CceeeccccCcceecceeccchhHHHHHHHHhhhhceEEEecCCeecCChhHhhhhccCCCCCEEEEEEEeCCCCeEEEE Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred EeCCeEEEEeCCceEEecccccccccceeecccchhhhccceeEecCcEEEEecCCccceeEEeeccCceeeccccccee Q lcl|Aclame:pro 81 VGNTNIAVWVNDVRQVVANTPSEWRNTIDRIQTAYDTIGDDAGAANTGRLIMVHPALQPKRLYRDNNNAWQFVNMHTGAV 160 (594) Q Consensus 81 ~g~~~~r~~~~~~~~~~~~~~~~~~~~~~~tpyta~~l~~i~~aq~adv~~~v~~~~~p~~L~R~~~~~w~~~~~~~~~~ 160 (594) ||++++|+|+++++++...++.++..+...+++..+++++|+|+|++|++|++|++++|++|+|.++++|.+....|... T Consensus 81 ~g~~~~r~~~~~~~~v~~~~~~~~~~~tp~~~t~~~~l~~i~~tqsad~~~~~~~~~~p~~L~R~~~~~w~~~~~~~~~~ 160 (594) T protein:vir:10 81 VGNTNIAVWVNDVRQVVANTPSEWRNTIDRIQTAYDTIGDDAGAANTGRLIMVHPALQPKRLYRDNNNAWQFVNMHTGAV 160 (594) T ss_pred EcCCeEEEEecCcEEEEccCCCcccccccceeeccCCccceEEEEEeeEEEEEcCCCCceEEEEccCCCceEEecccCcc Confidence 99999999999999988777666655433334445679999999999999999999999999999999999999999999 Q ss_pred eeccccCCcceEEEEEeceEEEEeCCCCCcEEEEEeccccccccccccCCCCccEEEEEcCCccEEEEEEcCCCEEEEec Q lcl|Aclame:pro 161 PAEWSPSNYPQTVGIFQNRVWYVGSPVHRTYFWATRAGKLEDIAPSTANNPNDPISFVGIMEGTPCWIIASSDVLTIGTT 240 (594) Q Consensus 161 p~~~~~~g~Ps~v~f~~~RL~~~~~~~~p~~v~~S~~gd~~nF~~~t~~~d~d~i~~~~s~~~~~i~~~~~~~~L~l~t~ 240 (594) +..+.++|||++|+||||||+|+++++.||+|||||+|||+||+++++++|||||+++++++.+++|++++.++|+|||+ T Consensus 161 p~~~~~~~~p~~v~f~q~RL~f~~~~~~p~~v~~Srtgd~~nF~~~~~~~ddd~i~~~~s~~~~~~~~v~~~~~L~i~t~ 240 (594) T protein:vir:10 161 PAEWSPSNYPQTVGIFQNRVWYVGSPVHRTYFWATRAGKLEDIAPSTANNPNDPISFVGIMEGTPCWIIASSDVLTIGTT 240 (594) T ss_pred cccccCCccceEEEEEeeeEEEEeCCCCCceEEEEecccccccccCCCCCCCccEEEEEecccceEEEEecCCceEEEec Confidence 99999999999999999999999999999999999999999999999999999999988888999999999999999999 Q ss_pred CcEEEEecCCCcccCcceeEEEeeeecccCCcccEEeCCeEEEEEcCCCEEEEEEeeecccceeecchhhhhhhhhcccc Q lcl|Aclame:pro 241 INDYQLAASTGVSVTAATAILRRSSVQGTAAVQGIPAEEQVIFCSRNKSKVYAMNYVREQDNWIPDEMSSQAQHLFTPIS 320 (594) Q Consensus 241 ~~q~~l~~~~~~~lTP~~~~~~~~s~~g~~~~~Pv~~g~~v~F~~~~g~~v~e~~~~~~~d~~~~~dls~~a~hl~~~~~ 320 (594) ++||+|+++++++|||+|+.++++|++||+.++|+.+|+.++|+|++|++||||.|++++|+|+++|+|++|+||+.++. T Consensus 241 ~~e~~l~~~~~~~lTp~~~~~~~~s~~g~~~~~P~~vg~~~~fv~~~g~~vre~~y~~~~d~y~~~dlt~~a~hl~~~~~ 320 (594) T protein:vir:10 241 INDYQLAASTGVSVTAATAILRRSSVQGTAAVQGIPAEEQVIFCSRNKSKVYAMNYVREQDNWIPDEMSSQAQHLFTPIS 320 (594) T ss_pred CceEEEecCCCcccccceEEEEEeeeeccCCCcceeeCCeEEEEcCCCCEEEEEEEeeccCceeccchhhhhhhhcCccc Confidence 99999999877899999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred cccCCceEEEEEeCCCCeEEEEEcCCCeEEEEEEecccceEeEEEeecCCCeEEEEEEEccCCCCEEEEEEEECCCCCcc Q lcl|Aclame:pro 321 SAKGASVRRVAYISDAAKSLWVVLENGQINYCCFDRTTDTKAWTQLELSGGKVIDIAAAFNPDSDYAYVAVVRSKAINGV 400 (594) Q Consensus 321 ~~~~~~i~~~a~~~~p~~~~~~~~~dg~~~~~ty~~eq~v~aW~~w~~~~g~v~~v~~~~~~~~d~~y~~v~r~~~~~g~ 400 (594) .+.+++|++|||+++|++++||+++||++++++|++||+|.|||||++++|+|++||++++.++|++|++|+|.+++++. T Consensus 321 ~~~~~~i~~~a~~~~p~~~~~~v~~dG~l~~~ty~~eq~v~aWs~~~~t~G~v~~va~i~~~~~d~l~~~V~R~~ti~g~ 400 (594) T protein:vir:10 321 SAKGASVRRVAYISDAAKSLWVVLENGQINYCCFDRTTDTKAWTQLELSGGKVIDIAAAFNPDSDYAYVAVVRSKAINGV 400 (594) T ss_pred cccCceEEEEEEecCCceEEEEEeCCCeEEEEEEecccceeeeEeeccCCCcEEEEEEeecCCCCEEEEEEEECCccccc Confidence 99999999999999999999999999999999999999999999999989999999999999999999999999999999 Q ss_pred eeEEEEEeccCcccccceeeeeeEEccCcccccccCCcccCceeEEEEeCCeeccCeEecCCceEEEEecCCCCCeEEEe Q lcl|Aclame:pro 401 QKNYTVLEKISSPRTDWKRADGWVVAQVNQNGDVLNLDRYIGRTAVIFSKYGLEAEVEVNNIGLTHRINGYDPNTVYYVG 480 (594) Q Consensus 401 ~~~~~~le~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~g~tv~i~adg~~~~~~~v~~~~~tl~~~~~~~~~~v~VG 480 (594) +++|.+||+++.....+...+++++++.++.+++++|+||+|++|.+++||..+++.+|.++++||+..+++++++|+|| T Consensus 401 ~~~y~~lE~~~~~~~~~~~~~~~~d~~~~~~~~vsgl~hLeg~tv~v~aDG~~~~~~~V~~g~itL~~~~~~~~~~v~VG 480 (594) T protein:vir:10 401 QKNYTVLEKISSPRTDWKRADGWVVAQVNQNGDVLNLDRYIGRTAVIFSKYGLEAEVEVNNIGLTHRINGYDPNTVYYVG 480 (594) T ss_pred eeeEEEeecCCCccccccccceeeeecccccceeecccccCCceEEEEeCCeecCCeEEcCCeeEeeccCCCCcceEEEe Confidence 99999999999999989999999999999999999999999999999999999999999999999999999999999999 Q ss_pred EeeeeEEEecceeeeCCCCccceeeEEEEEEEEEEEcccceEEeeeeccccccccccccccccCCCccccccCcEEEEee Q lcl|Aclame:pro 481 YKMDSYFRTLTPSNGDMKKSMFGSKIRISKVQLALFDSIEPTVNGEPADDRSTDDIMDARLLDFSSNSGSSNGTRLVDYN 560 (594) Q Consensus 481 ~~y~~~v~~~~~~~~~~~g~~~~~~~ri~~v~v~l~~S~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~tg~~~v~~~ 560 (594) ++|+++++++||++++++|+.+++++||+++++++++|.+++++.+....+..++.+..+...+.+.+++++|+.++.+. T Consensus 481 l~Y~s~i~~lp~~~~~~~gs~~g~r~ri~r~~v~~~~S~g~~vg~~~~~~r~~~~~~~~~~~~~~g~~~~~tg~~~v~~~ 560 (594) T protein:vir:10 481 YKMDSYFRTLTPSNGDMKKSMFGSKIRISKVQLALFDSIEPTVNGEPADDRSTDDIMDARLLDFSSNSGSSNGTRLVDYN 560 (594) T ss_pred eeeeEEEEeecccccCCcccccCccEEEEEEEEEEEcceeeEECCcccccccchhhccccCCcccCcccccCCceEEEEc Confidence 99999999999999999999999999999999999999999999887778888888888999999999999999999988 Q ss_pred cCCcCcceEEEEEECCCcCEEEEEEEEEEEeccC Q lcl|Aclame:pro 561 PLGWENDGKMVIAVEQPFLCEVVGVFSVVQSNKV 594 (594) Q Consensus 561 ~~g~~~~~~v~I~~~~P~P~tIlai~~~v~~n~~ 594 (594) +.||+++.+|+|+|++|+|||||||++||++||| T Consensus 561 ~~G~~~~~~i~I~qd~PlPltvlai~~ev~~~~~ 594 (594) T protein:vir:10 561 PLGWENDGKMVIAVEQPFLCEVVGVFSVVQSNKV 594 (594) T ss_pred cCCcCcccEEEEEECCCcCEEEEEEEEEEEeccC Confidence 8899999999999999999999999999999999 No 2 >protein:vir:98487 Length: 681 # NCBI annotation: hypothetical protein predicted by GeneMark # Family: family:all:780 # MgeID: mge:1592 # MgeName: BMP-1 # Cross-refs: genbank:acc:NP_996575;genbank:gi:45569506;genbank:GeneID:2767815 Probab=100.00 E-value=5.1e-184 Score=1025.45 Aligned_cols=568 Identities=19% Similarity=0.271 Sum_probs=510.3 Q ss_pred CCcc--cccccccceecchhcccchHHHHHHHHHhhcCcEEeecCCceecCcceeeeeeeCCCCCEEEEEEEeCCCceEE Q lcl|Aclame:pro 1 MADF--SQTSFKGGVIAPRLQFNEYESAYHHSIEDAVNFVVTEQGSLITRCGSEEVGLCQDGEVRLFRLPAVDAPSNDVI 78 (594) Q Consensus 1 m~~~--~~~~f~~Ge~sp~l~~r~d~~~y~~~~~~~~N~~~~~~G~~~~rpg~~~~~~~~~~~~~~rlipF~~s~~q~y~ 78 (594) |+|+ +|+||++|||||+|++|+||++|++||++||||+|+||||++|||||+|++++|++++++|||||+||++|+|+ T Consensus 1 m~~~~~~~~~f~~Ge~~p~l~~r~D~~~y~~~~~~~~N~~~~~~G~~~~R~g~~~~~~~~~~~~~~rlipf~~~~~~~~~ 80 (681) T protein:vir:98 1 MSNVRVLQRSFGGGEISPEMFGRIDDVKYQSGLAICRNFVVKPQGPAENRAGFAFVREVKDSAKKVRLIPFTYSVTQTMV 80 (681) T ss_pred CcceeEeeeecCCceeeeeeccchhHHHHHHHHHHhcCcEEEecCCceecChhHhhhhcCCCCCcEEEEEEEeCCCceEE Confidence 9984 89999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred EEEeCCeEEEEeCCceEEecccccccccceeecccchhhhccceeEecCcEEEEecCCccceeEEeeccCceeecccccc Q lcl|Aclame:pro 79 VEVGNTNIAVWVNDVRQVVANTPSEWRNTIDRIQTAYDTIGDDAGAANTGRLIMVHPALQPKRLYRDNNNAWQFVNMHTG 158 (594) Q Consensus 79 le~g~~~~r~~~~~~~~~~~~~~~~~~~~~~~tpyta~~l~~i~~aq~adv~~~v~~~~~p~~L~R~~~~~w~~~~~~~~ 158 (594) ||||+++||+|.++++++..+.+.+ ..|||++++|++|+|+|++|+||++|+++||++|.|.++++|+++++.+. T Consensus 81 l~~g~~~~r~~~~~~~~~~~~~~~~-----~~tpy~~~~l~~l~~~q~aD~~~i~h~~~~p~~L~r~~~~~W~l~~~~f~ 155 (681) T protein:vir:98 81 IELGAGYFRFHTNGGTLLDGAVPYE-----IANPYAEADLFNIHYVQSADVLTLVHPNYAPRELRRLGATNWQLATIAFT 155 (681) T ss_pred EEEeCCeEEEEeCCcEEeeCcEeEE-----ecCCCChhhhcCceEEEEcCEEEEECCCCcceEEEEccCCceEEEEEEec Confidence 9999999999999999986554443 45899999999999999999999999999999999999999999887641 Q ss_pred -------------------------------------------------------------------------------- Q lcl|Aclame:pro 159 -------------------------------------------------------------------------------- 158 (594) Q Consensus 159 -------------------------------------------------------------------------------- 158 (594) T Consensus 156 ~~p~~p~~~~at~~~~~~~~t~~~~v~avda~t~~~s~~~~~~tvt~~~~~~~~~~t~~w~a~~g~~~~~V~~~~~gi~g 235 (681) T protein:vir:98 156 SPVATPTSVTATSNNKGTDYTYRYVVTALDAEGKTESAPSSAGTCTNNLFTNGGANTIAWSASSGASRYNVYKEQGGLYG 235 (681) T ss_pred cccccceeeeeeccCCccceeEeEEEEEeecccceeecCCcceEEeeeeecCCcceeEEEEecCCceeeeecccceeEEE Confidence Q ss_pred -------------------------eeeeccccCCcceEEEEEeceEEEEeCCCCCcEEEEEeccccccccccccCCCCc Q lcl|Aclame:pro 159 -------------------------AVPAEWSPSNYPQTVGIFQNRVWYVGSPVHRTYFWATRAGKLEDIAPSTANNPND 213 (594) Q Consensus 159 -------------------------~~p~~~~~~g~Ps~v~f~~~RL~~~~~~~~p~~v~~S~~gd~~nF~~~t~~~d~d 213 (594) ...+|++.+|||++|+||||||+|++++..||+|||||+|||+||+++++++||| T Consensus 236 ~ig~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~~gyP~~v~f~q~RL~f~~~~~~p~~v~~Srsgdy~nF~~~~~~~ddD 315 (681) T protein:vir:98 236 YIGQTTGTSLVDDNIAPDLSVTPPIYDAVFNAAGDYPAAVSYFEQRRCFAGTTNKPQNIWMTRSGTESAMSYSLPVRDDD 315 (681) T ss_pred EeeccceeeeeecccccCccccccccccccccCCCceEEEEEEcceEEEeeCCCCCcEEEEEcccCcccccccCCCCCCc Confidence 0111335678999999999999999999999999999999999999999989999 Q ss_pred cEEEE-EcCCccEEEEEEcCCCEEEEecCcEEEEecCCCcccCcceeEEEeeeecccCCcccEEeCCeEEEEEcCCCEEE Q lcl|Aclame:pro 214 PISFV-GIMEGTPCWIIASSDVLTIGTTINDYQLAASTGVSVTAATAILRRSSVQGTAAVQGIPAEEQVIFCSRNKSKVY 292 (594) Q Consensus 214 ~i~~~-~s~~~~~i~~~~~~~~L~l~t~~~q~~l~~~~~~~lTP~~~~~~~~s~~g~~~~~Pv~~g~~v~F~~~~g~~v~ 292 (594) ||+++ ++.+.+.|+|+.+.++|+|||+++||.|+++.+++|||+|++++++|.+||++++|+.+|++++|+|++|++|| T Consensus 316 ~i~~~~~~~~~~~i~~~v~~~~lli~t~~~e~~l~~~~~~~lTP~~~~~~~~s~~g~~~~~Pv~vg~~v~fv~~~g~~vr 395 (681) T protein:vir:98 316 RVAFRVAAREANAIRHIVPLTELLLLTSSGEWRVASVNSDAVTPTTISVRPQSYVGATDVQPVVVNNTTIYGAARGGHVR 395 (681) T ss_pred cEEEEEcCCcceeEEEEEecCcEEEEEcCcEEEEecCCCccccceeEEEEEeeeeccccccceeeCCeEEEEecCCCEEE Confidence 99995 46667888777667889999999999999876779999999999999999999999999999999999999999 Q ss_pred EEEeeecccceeecchhhhhhhhhcccccccCCceEEEEEeCCCCeEEEEEcCCCeEEEEEEecccceEeEEEeecCCCe Q lcl|Aclame:pro 293 AMNYVREQDNWIPDEMSSQAQHLFTPISSAKGASVRRVAYISDAAKSLWVVLENGQINYCCFDRTTDTKAWTQLELSGGK 372 (594) Q Consensus 293 e~~~~~~~d~~~~~dls~~a~hl~~~~~~~~~~~i~~~a~~~~p~~~~~~~~~dg~~~~~ty~~eq~v~aW~~w~~~~g~ 372 (594) ||.|++++|+|+++|+|++|+||+++ .+|++||++++|++++||+++||++++|+|++||+|.|||||++ +|+ T Consensus 396 e~~y~~~~d~~~~~dlt~~a~Hl~~~------~~i~~~a~~~~p~~~~~~v~~dg~l~~~ty~~eq~v~aW~~~~~-~g~ 468 (681) T protein:vir:98 396 ELAYNWQANGFVTGDLSLRAAHLFDN------LDILDMAYAKAPQPIVWFISSSGKLLGLTYVPEQQIGAWHQHDT-DGV 468 (681) T ss_pred EEEEeeecCceeccchhhhhhhhcCC------CCeEEEEEecCCCEEEEEEecCCcEEEEEEecccceeeEEEEec-CCc Confidence 99999999999999999999999863 47999999999999999999999999999999999999999999 799 Q ss_pred EEEEEEEccCCCCEEEEEEEECCCCCcceeEEEEEeccCcccccceeeeeeEEccCccc----ccccCCcccCceeEEEE Q lcl|Aclame:pro 373 VIDIAAAFNPDSDYAYVAVVRSKAINGVQKNYTVLEKISSPRTDWKRADGWVVAQVNQN----GDVLNLDRYIGRTAVIF 448 (594) Q Consensus 373 v~~v~~~~~~~~d~~y~~v~r~~~~~g~~~~~~~le~~~~~~~~~~~~~~~~~~~~~~~----~~~~~l~~l~g~tv~i~ 448 (594) |++||+++++.+|++|++|+| +++|.+++| +|+++.+..+....+.+++++.++. .++++|+|++|++|.++ T Consensus 469 v~~v~~i~~~~~d~l~~vv~r--~~~g~~~~y--ie~~~~~~~~~~~~~~~vD~~~t~~~~~~~~~sgl~~leG~tv~i~ 544 (681) T protein:vir:98 469 FESCAVVAEGNEDRLYAVVRR--TIGGNEVRY--VERMASRQFDAQADAFFVDSGLTYSGEPVSHISGLEHLEGKTVSIL 544 (681) T ss_pred EEEEEEecCCCCcEEEEEEEe--cCCCCeEEE--EEecCCccccccccceEeeccccccCcceeeeccccCCCCcEEEEE Confidence 999999999999999999999 578888876 8999887776655566667666553 36899999999999999 Q ss_pred eCCeeccCeEecCCceEEEEecCCCCCeEEEeEeeeeEEEecceeeeCCCCccceeeEEEEEEEEEEEcccceEEeeeec Q lcl|Aclame:pro 449 SKYGLEAEVEVNNIGLTHRINGYDPNTVYYVGYKMDSYFRTLTPSNGDMKKSMFGSKIRISKVQLALFDSIEPTVNGEPA 528 (594) Q Consensus 449 adg~~~~~~~v~~~~~tl~~~~~~~~~~v~VG~~y~~~v~~~~~~~~~~~g~~~~~~~ri~~v~v~l~~S~g~~v~~~~~ 528 (594) +||..+++.+|.+|.+++ +.++++|+||++|+++++++||+++.++|+.+++++||+++.+|+++|.++.++.... T Consensus 545 aDG~~~~~~~V~~G~itl----~~~~~~v~VGl~Y~s~i~~lp~~~~~~~g~~~g~~~ri~rv~lr~~~S~g~~~~~~~~ 620 (681) T protein:vir:98 545 ADGAVHPQRVVTDGAIDL----DVEAGTVHIGLPITAELQTLPVAMQLDGSFGQGRVKNINKLWLRVHRSSGIFAGPHAD 620 (681) T ss_pred eCCeecCcEeecCcEEEe----CcCCceEEEeeeceeEEEecceeeecCCcccCCceEEEEEEEEEEEcccceEEeeCCC Confidence 999999999999987765 6678999999999999999999999999999999999999999999999999875322 Q ss_pred cccccccccccc-cccCCCccccccCcEEEEeecCCcCcceEEEEEECCCcCEEEEEEEEEEEecc Q lcl|Aclame:pro 529 DDRSTDDIMDAR-LLDFSSNSGSSNGTRLVDYNPLGWENDGKMVIAVEQPFLCEVVGVFSVVQSNK 593 (594) Q Consensus 529 ~~~~~~~~~~~~-~~~~~~~~~~~tg~~~v~~~~~g~~~~~~v~I~~~~P~P~tIlai~~~v~~n~ 593 (594) ... + ...+ .......+++++|++++++ .++|+++.+|+|+|++|+||+|+||.+||++|- T Consensus 621 ~l~--~--~~~~~~~~~g~~~~l~TG~~~v~v-~~~~~~~~~v~I~qd~PlP~tvlsi~~ev~vgg 681 (681) T protein:vir:98 621 ALT--E--VKQRTSEPYGSPPALKSEEIPLVL-SPKWGDSGQLFVRQADPLPLMIVSMSAEIAIGA 681 (681) T ss_pred ceE--E--EEEeccccccccCCccCCeEEEEe-CCCcCcceEEEEEECCCcCEEEEEeeEEEEeeC Confidence 111 1 1111 1122334678999999875 568999999999999999999999999999999 No 3 >protein:vir:107423 Length: 681 # NCBI annotation: Bbp13 # Family: family:all:780 # MgeID: mge:1537 # MgeName: BPP-1 # Cross-refs: genbank:acc:NP_958682;genbank:gi:41179374;genbank:GeneID:2717217 Probab=100.00 E-value=5.1e-184 Score=1025.45 Aligned_cols=568 Identities=19% Similarity=0.271 Sum_probs=510.3 Q ss_pred CCcc--cccccccceecchhcccchHHHHHHHHHhhcCcEEeecCCceecCcceeeeeeeCCCCCEEEEEEEeCCCceEE Q lcl|Aclame:pro 1 MADF--SQTSFKGGVIAPRLQFNEYESAYHHSIEDAVNFVVTEQGSLITRCGSEEVGLCQDGEVRLFRLPAVDAPSNDVI 78 (594) Q Consensus 1 m~~~--~~~~f~~Ge~sp~l~~r~d~~~y~~~~~~~~N~~~~~~G~~~~rpg~~~~~~~~~~~~~~rlipF~~s~~q~y~ 78 (594) |+|+ +|+||++|||||+|++|+||++|++||++||||+|+||||++|||||+|++++|++++++|||||+||++|+|+ T Consensus 1 m~~~~~~~~~f~~Ge~~p~l~~r~D~~~y~~~~~~~~N~~~~~~G~~~~R~g~~~~~~~~~~~~~~rlipf~~~~~~~~~ 80 (681) T protein:vir:10 1 MSNVRVLQRSFGGGEISPEMFGRIDDVKYQSGLAICRNFVVKPQGPAENRAGFAFVREVKDSAKKVRLIPFTYSVTQTMV 80 (681) T ss_pred CcceeEeeeecCCceeeeeeccchhHHHHHHHHHHhcCcEEEecCCceecChhHhhhhcCCCCCcEEEEEEEeCCCceEE Confidence 9984 89999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred EEEeCCeEEEEeCCceEEecccccccccceeecccchhhhccceeEecCcEEEEecCCccceeEEeeccCceeecccccc Q lcl|Aclame:pro 79 VEVGNTNIAVWVNDVRQVVANTPSEWRNTIDRIQTAYDTIGDDAGAANTGRLIMVHPALQPKRLYRDNNNAWQFVNMHTG 158 (594) Q Consensus 79 le~g~~~~r~~~~~~~~~~~~~~~~~~~~~~~tpyta~~l~~i~~aq~adv~~~v~~~~~p~~L~R~~~~~w~~~~~~~~ 158 (594) ||||+++||+|.++++++..+.+.+ ..|||++++|++|+|+|++|+||++|+++||++|.|.++++|+++++.+. T Consensus 81 l~~g~~~~r~~~~~~~~~~~~~~~~-----~~tpy~~~~l~~l~~~q~aD~~~i~h~~~~p~~L~r~~~~~W~l~~~~f~ 155 (681) T protein:vir:10 81 IELGAGYFRFHTNGGTLLDGAVPYE-----IANPYAEADLFNIHYVQSADVLTLVHPNYAPRELRRLGATNWQLATIAFT 155 (681) T ss_pred EEEeCCeEEEEeCCcEEeeCcEeEE-----ecCCCChhhhcCceEEEEcCEEEEECCCCcceEEEEccCCceEEEEEEec Confidence 9999999999999999986554443 45899999999999999999999999999999999999999999887641 Q ss_pred -------------------------------------------------------------------------------- Q lcl|Aclame:pro 159 -------------------------------------------------------------------------------- 158 (594) Q Consensus 159 -------------------------------------------------------------------------------- 158 (594) T Consensus 156 ~~p~~p~~~~at~~~~~~~~t~~~~v~avda~t~~~s~~~~~~tvt~~~~~~~~~~t~~w~a~~g~~~~~V~~~~~gi~g 235 (681) T protein:vir:10 156 SPVATPTSVTATSNNKGTDYTYRYVVTALDAEGKTESAPSSAGTCTNNLFTNGGANTIAWSASSGASRYNVYKEQGGLYG 235 (681) T ss_pred cccccceeeeeeccCCccceeEeEEEEEeecccceeecCCcceEEeeeeecCCcceeEEEEecCCceeeeecccceeEEE Confidence Q ss_pred -------------------------eeeeccccCCcceEEEEEeceEEEEeCCCCCcEEEEEeccccccccccccCCCCc Q lcl|Aclame:pro 159 -------------------------AVPAEWSPSNYPQTVGIFQNRVWYVGSPVHRTYFWATRAGKLEDIAPSTANNPND 213 (594) Q Consensus 159 -------------------------~~p~~~~~~g~Ps~v~f~~~RL~~~~~~~~p~~v~~S~~gd~~nF~~~t~~~d~d 213 (594) ...+|++.+|||++|+||||||+|++++..||+|||||+|||+||+++++++||| T Consensus 236 ~ig~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~~gyP~~v~f~q~RL~f~~~~~~p~~v~~Srsgdy~nF~~~~~~~ddD 315 (681) T protein:vir:10 236 YIGQTTGTSLVDDNIAPDLSVTPPIYDAVFNAAGDYPAAVSYFEQRRCFAGTTNKPQNIWMTRSGTESAMSYSLPVRDDD 315 (681) T ss_pred EeeccceeeeeecccccCccccccccccccccCCCceEEEEEEcceEEEeeCCCCCcEEEEEcccCcccccccCCCCCCc Confidence 0111335678999999999999999999999999999999999999999989999 Q ss_pred cEEEE-EcCCccEEEEEEcCCCEEEEecCcEEEEecCCCcccCcceeEEEeeeecccCCcccEEeCCeEEEEEcCCCEEE Q lcl|Aclame:pro 214 PISFV-GIMEGTPCWIIASSDVLTIGTTINDYQLAASTGVSVTAATAILRRSSVQGTAAVQGIPAEEQVIFCSRNKSKVY 292 (594) Q Consensus 214 ~i~~~-~s~~~~~i~~~~~~~~L~l~t~~~q~~l~~~~~~~lTP~~~~~~~~s~~g~~~~~Pv~~g~~v~F~~~~g~~v~ 292 (594) ||+++ ++.+.+.|+|+.+.++|+|||+++||.|+++.+++|||+|++++++|.+||++++|+.+|++++|+|++|++|| T Consensus 316 ~i~~~~~~~~~~~i~~~v~~~~lli~t~~~e~~l~~~~~~~lTP~~~~~~~~s~~g~~~~~Pv~vg~~v~fv~~~g~~vr 395 (681) T protein:vir:10 316 RVAFRVAAREANAIRHIVPLTELLLLTSSGEWRVASVNSDAVTPTTISVRPQSYVGATDVQPVVVNNTTIYGAARGGHVR 395 (681) T ss_pred cEEEEEcCCcceeEEEEEecCcEEEEEcCcEEEEecCCCccccceeEEEEEeeeeccccccceeeCCeEEEEecCCCEEE Confidence 99995 46667888777667889999999999999876779999999999999999999999999999999999999999 Q ss_pred EEEeeecccceeecchhhhhhhhhcccccccCCceEEEEEeCCCCeEEEEEcCCCeEEEEEEecccceEeEEEeecCCCe Q lcl|Aclame:pro 293 AMNYVREQDNWIPDEMSSQAQHLFTPISSAKGASVRRVAYISDAAKSLWVVLENGQINYCCFDRTTDTKAWTQLELSGGK 372 (594) Q Consensus 293 e~~~~~~~d~~~~~dls~~a~hl~~~~~~~~~~~i~~~a~~~~p~~~~~~~~~dg~~~~~ty~~eq~v~aW~~w~~~~g~ 372 (594) ||.|++++|+|+++|+|++|+||+++ .+|++||++++|++++||+++||++++|+|++||+|.|||||++ +|+ T Consensus 396 e~~y~~~~d~~~~~dlt~~a~Hl~~~------~~i~~~a~~~~p~~~~~~v~~dg~l~~~ty~~eq~v~aW~~~~~-~g~ 468 (681) T protein:vir:10 396 ELAYNWQANGFVTGDLSLRAAHLFDN------LDILDMAYAKAPQPIVWFISSSGKLLGLTYVPEQQIGAWHQHDT-DGV 468 (681) T ss_pred EEEEeeecCceeccchhhhhhhhcCC------CCeEEEEEecCCCEEEEEEecCCcEEEEEEecccceeeEEEEec-CCc Confidence 99999999999999999999999863 47999999999999999999999999999999999999999999 799 Q ss_pred EEEEEEEccCCCCEEEEEEEECCCCCcceeEEEEEeccCcccccceeeeeeEEccCccc----ccccCCcccCceeEEEE Q lcl|Aclame:pro 373 VIDIAAAFNPDSDYAYVAVVRSKAINGVQKNYTVLEKISSPRTDWKRADGWVVAQVNQN----GDVLNLDRYIGRTAVIF 448 (594) Q Consensus 373 v~~v~~~~~~~~d~~y~~v~r~~~~~g~~~~~~~le~~~~~~~~~~~~~~~~~~~~~~~----~~~~~l~~l~g~tv~i~ 448 (594) |++||+++++.+|++|++|+| +++|.+++| +|+++.+..+....+.+++++.++. .++++|+|++|++|.++ T Consensus 469 v~~v~~i~~~~~d~l~~vv~r--~~~g~~~~y--ie~~~~~~~~~~~~~~~vD~~~t~~~~~~~~~sgl~~leG~tv~i~ 544 (681) T protein:vir:10 469 FESCAVVAEGNEDRLYAVVRR--TIGGNEVRY--VERMASRQFDAQADAFFVDSGLTYSGEPVSHISGLEHLEGKTVSIL 544 (681) T ss_pred EEEEEEecCCCCcEEEEEEEe--cCCCCeEEE--EEecCCccccccccceEeeccccccCcceeeeccccCCCCcEEEEE Confidence 999999999999999999999 578888876 8999887776655566667666553 36899999999999999 Q ss_pred eCCeeccCeEecCCceEEEEecCCCCCeEEEeEeeeeEEEecceeeeCCCCccceeeEEEEEEEEEEEcccceEEeeeec Q lcl|Aclame:pro 449 SKYGLEAEVEVNNIGLTHRINGYDPNTVYYVGYKMDSYFRTLTPSNGDMKKSMFGSKIRISKVQLALFDSIEPTVNGEPA 528 (594) Q Consensus 449 adg~~~~~~~v~~~~~tl~~~~~~~~~~v~VG~~y~~~v~~~~~~~~~~~g~~~~~~~ri~~v~v~l~~S~g~~v~~~~~ 528 (594) +||..+++.+|.+|.+++ +.++++|+||++|+++++++||+++.++|+.+++++||+++.+|+++|.++.++.... T Consensus 545 aDG~~~~~~~V~~G~itl----~~~~~~v~VGl~Y~s~i~~lp~~~~~~~g~~~g~~~ri~rv~lr~~~S~g~~~~~~~~ 620 (681) T protein:vir:10 545 ADGAVHPQRVVTDGAIDL----DVEAGTVHIGLPITAELQTLPVAMQLDGSFGQGRVKNINKLWLRVHRSSGIFAGPHAD 620 (681) T ss_pred eCCeecCcEeecCcEEEe----CcCCceEEEeeeceeEEEecceeeecCCcccCCceEEEEEEEEEEEcccceEEeeCCC Confidence 999999999999987765 6678999999999999999999999999999999999999999999999999875322 Q ss_pred cccccccccccc-cccCCCccccccCcEEEEeecCCcCcceEEEEEECCCcCEEEEEEEEEEEecc Q lcl|Aclame:pro 529 DDRSTDDIMDAR-LLDFSSNSGSSNGTRLVDYNPLGWENDGKMVIAVEQPFLCEVVGVFSVVQSNK 593 (594) Q Consensus 529 ~~~~~~~~~~~~-~~~~~~~~~~~tg~~~v~~~~~g~~~~~~v~I~~~~P~P~tIlai~~~v~~n~ 593 (594) ... + ...+ .......+++++|++++++ .++|+++.+|+|+|++|+||+|+||.+||++|- T Consensus 621 ~l~--~--~~~~~~~~~g~~~~l~TG~~~v~v-~~~~~~~~~v~I~qd~PlP~tvlsi~~ev~vgg 681 (681) T protein:vir:10 621 ALT--E--VKQRTSEPYGSPPALKSEEIPLVL-SPKWGDSGQLFVRQADPLPLMIVSMSAEIAIGA 681 (681) T ss_pred ceE--E--EEEeccccccccCCccCCeEEEEe-CCCcCcceEEEEEECCCcCEEEEEeeEEEEeeC Confidence 111 1 1111 1122334678999999875 568999999999999999999999999999999 No 4 >protein:vir:107802 Length: 681 # NCBI annotation: hypothetical protein predicted by GeneMark # Family: family:all:780 # MgeID: mge:1673 # MgeName: BIP-1 # Cross-refs: genbank:acc:NP_996623;genbank:gi:45580757;genbank:GeneID:2767878 Probab=100.00 E-value=5.1e-184 Score=1025.45 Aligned_cols=568 Identities=19% Similarity=0.271 Sum_probs=510.3 Q ss_pred CCcc--cccccccceecchhcccchHHHHHHHHHhhcCcEEeecCCceecCcceeeeeeeCCCCCEEEEEEEeCCCceEE Q lcl|Aclame:pro 1 MADF--SQTSFKGGVIAPRLQFNEYESAYHHSIEDAVNFVVTEQGSLITRCGSEEVGLCQDGEVRLFRLPAVDAPSNDVI 78 (594) Q Consensus 1 m~~~--~~~~f~~Ge~sp~l~~r~d~~~y~~~~~~~~N~~~~~~G~~~~rpg~~~~~~~~~~~~~~rlipF~~s~~q~y~ 78 (594) |+|+ +|+||++|||||+|++|+||++|++||++||||+|+||||++|||||+|++++|++++++|||||+||++|+|+ T Consensus 1 m~~~~~~~~~f~~Ge~~p~l~~r~D~~~y~~~~~~~~N~~~~~~G~~~~R~g~~~~~~~~~~~~~~rlipf~~~~~~~~~ 80 (681) T protein:vir:10 1 MSNVRVLQRSFGGGEISPEMFGRIDDVKYQSGLAICRNFVVKPQGPAENRAGFAFVREVKDSAKKVRLIPFTYSVTQTMV 80 (681) T ss_pred CcceeEeeeecCCceeeeeeccchhHHHHHHHHHHhcCcEEEecCCceecChhHhhhhcCCCCCcEEEEEEEeCCCceEE Confidence 9984 89999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred EEEeCCeEEEEeCCceEEecccccccccceeecccchhhhccceeEecCcEEEEecCCccceeEEeeccCceeecccccc Q lcl|Aclame:pro 79 VEVGNTNIAVWVNDVRQVVANTPSEWRNTIDRIQTAYDTIGDDAGAANTGRLIMVHPALQPKRLYRDNNNAWQFVNMHTG 158 (594) Q Consensus 79 le~g~~~~r~~~~~~~~~~~~~~~~~~~~~~~tpyta~~l~~i~~aq~adv~~~v~~~~~p~~L~R~~~~~w~~~~~~~~ 158 (594) ||||+++||+|.++++++..+.+.+ ..|||++++|++|+|+|++|+||++|+++||++|.|.++++|+++++.+. T Consensus 81 l~~g~~~~r~~~~~~~~~~~~~~~~-----~~tpy~~~~l~~l~~~q~aD~~~i~h~~~~p~~L~r~~~~~W~l~~~~f~ 155 (681) T protein:vir:10 81 IELGAGYFRFHTNGGTLLDGAVPYE-----IANPYAEADLFNIHYVQSADVLTLVHPNYAPRELRRLGATNWQLATIAFT 155 (681) T ss_pred EEEeCCeEEEEeCCcEEeeCcEeEE-----ecCCCChhhhcCceEEEEcCEEEEECCCCcceEEEEccCCceEEEEEEec Confidence 9999999999999999986554443 45899999999999999999999999999999999999999999887641 Q ss_pred -------------------------------------------------------------------------------- Q lcl|Aclame:pro 159 -------------------------------------------------------------------------------- 158 (594) Q Consensus 159 -------------------------------------------------------------------------------- 158 (594) T Consensus 156 ~~p~~p~~~~at~~~~~~~~t~~~~v~avda~t~~~s~~~~~~tvt~~~~~~~~~~t~~w~a~~g~~~~~V~~~~~gi~g 235 (681) T protein:vir:10 156 SPVATPTSVTATSNNKGTDYTYRYVVTALDAEGKTESAPSSAGTCTNNLFTNGGANTIAWSASSGASRYNVYKEQGGLYG 235 (681) T ss_pred cccccceeeeeeccCCccceeEeEEEEEeecccceeecCCcceEEeeeeecCCcceeEEEEecCCceeeeecccceeEEE Confidence Q ss_pred -------------------------eeeeccccCCcceEEEEEeceEEEEeCCCCCcEEEEEeccccccccccccCCCCc Q lcl|Aclame:pro 159 -------------------------AVPAEWSPSNYPQTVGIFQNRVWYVGSPVHRTYFWATRAGKLEDIAPSTANNPND 213 (594) Q Consensus 159 -------------------------~~p~~~~~~g~Ps~v~f~~~RL~~~~~~~~p~~v~~S~~gd~~nF~~~t~~~d~d 213 (594) ...+|++.+|||++|+||||||+|++++..||+|||||+|||+||+++++++||| T Consensus 236 ~ig~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~~gyP~~v~f~q~RL~f~~~~~~p~~v~~Srsgdy~nF~~~~~~~ddD 315 (681) T protein:vir:10 236 YIGQTTGTSLVDDNIAPDLSVTPPIYDAVFNAAGDYPAAVSYFEQRRCFAGTTNKPQNIWMTRSGTESAMSYSLPVRDDD 315 (681) T ss_pred EeeccceeeeeecccccCccccccccccccccCCCceEEEEEEcceEEEeeCCCCCcEEEEEcccCcccccccCCCCCCc Confidence 0111335678999999999999999999999999999999999999999989999 Q ss_pred cEEEE-EcCCccEEEEEEcCCCEEEEecCcEEEEecCCCcccCcceeEEEeeeecccCCcccEEeCCeEEEEEcCCCEEE Q lcl|Aclame:pro 214 PISFV-GIMEGTPCWIIASSDVLTIGTTINDYQLAASTGVSVTAATAILRRSSVQGTAAVQGIPAEEQVIFCSRNKSKVY 292 (594) Q Consensus 214 ~i~~~-~s~~~~~i~~~~~~~~L~l~t~~~q~~l~~~~~~~lTP~~~~~~~~s~~g~~~~~Pv~~g~~v~F~~~~g~~v~ 292 (594) ||+++ ++.+.+.|+|+.+.++|+|||+++||.|+++.+++|||+|++++++|.+||++++|+.+|++++|+|++|++|| T Consensus 316 ~i~~~~~~~~~~~i~~~v~~~~lli~t~~~e~~l~~~~~~~lTP~~~~~~~~s~~g~~~~~Pv~vg~~v~fv~~~g~~vr 395 (681) T protein:vir:10 316 RVAFRVAAREANAIRHIVPLTELLLLTSSGEWRVASVNSDAVTPTTISVRPQSYVGATDVQPVVVNNTTIYGAARGGHVR 395 (681) T ss_pred cEEEEEcCCcceeEEEEEecCcEEEEEcCcEEEEecCCCccccceeEEEEEeeeeccccccceeeCCeEEEEecCCCEEE Confidence 99995 46667888777667889999999999999876779999999999999999999999999999999999999999 Q ss_pred EEEeeecccceeecchhhhhhhhhcccccccCCceEEEEEeCCCCeEEEEEcCCCeEEEEEEecccceEeEEEeecCCCe Q lcl|Aclame:pro 293 AMNYVREQDNWIPDEMSSQAQHLFTPISSAKGASVRRVAYISDAAKSLWVVLENGQINYCCFDRTTDTKAWTQLELSGGK 372 (594) Q Consensus 293 e~~~~~~~d~~~~~dls~~a~hl~~~~~~~~~~~i~~~a~~~~p~~~~~~~~~dg~~~~~ty~~eq~v~aW~~w~~~~g~ 372 (594) ||.|++++|+|+++|+|++|+||+++ .+|++||++++|++++||+++||++++|+|++||+|.|||||++ +|+ T Consensus 396 e~~y~~~~d~~~~~dlt~~a~Hl~~~------~~i~~~a~~~~p~~~~~~v~~dg~l~~~ty~~eq~v~aW~~~~~-~g~ 468 (681) T protein:vir:10 396 ELAYNWQANGFVTGDLSLRAAHLFDN------LDILDMAYAKAPQPIVWFISSSGKLLGLTYVPEQQIGAWHQHDT-DGV 468 (681) T ss_pred EEEEeeecCceeccchhhhhhhhcCC------CCeEEEEEecCCCEEEEEEecCCcEEEEEEecccceeeEEEEec-CCc Confidence 99999999999999999999999863 47999999999999999999999999999999999999999999 799 Q ss_pred EEEEEEEccCCCCEEEEEEEECCCCCcceeEEEEEeccCcccccceeeeeeEEccCccc----ccccCCcccCceeEEEE Q lcl|Aclame:pro 373 VIDIAAAFNPDSDYAYVAVVRSKAINGVQKNYTVLEKISSPRTDWKRADGWVVAQVNQN----GDVLNLDRYIGRTAVIF 448 (594) Q Consensus 373 v~~v~~~~~~~~d~~y~~v~r~~~~~g~~~~~~~le~~~~~~~~~~~~~~~~~~~~~~~----~~~~~l~~l~g~tv~i~ 448 (594) |++||+++++.+|++|++|+| +++|.+++| +|+++.+..+....+.+++++.++. .++++|+|++|++|.++ T Consensus 469 v~~v~~i~~~~~d~l~~vv~r--~~~g~~~~y--ie~~~~~~~~~~~~~~~vD~~~t~~~~~~~~~sgl~~leG~tv~i~ 544 (681) T protein:vir:10 469 FESCAVVAEGNEDRLYAVVRR--TIGGNEVRY--VERMASRQFDAQADAFFVDSGLTYSGEPVSHISGLEHLEGKTVSIL 544 (681) T ss_pred EEEEEEecCCCCcEEEEEEEe--cCCCCeEEE--EEecCCccccccccceEeeccccccCcceeeeccccCCCCcEEEEE Confidence 999999999999999999999 578888876 8999887776655566667666553 36899999999999999 Q ss_pred eCCeeccCeEecCCceEEEEecCCCCCeEEEeEeeeeEEEecceeeeCCCCccceeeEEEEEEEEEEEcccceEEeeeec Q lcl|Aclame:pro 449 SKYGLEAEVEVNNIGLTHRINGYDPNTVYYVGYKMDSYFRTLTPSNGDMKKSMFGSKIRISKVQLALFDSIEPTVNGEPA 528 (594) Q Consensus 449 adg~~~~~~~v~~~~~tl~~~~~~~~~~v~VG~~y~~~v~~~~~~~~~~~g~~~~~~~ri~~v~v~l~~S~g~~v~~~~~ 528 (594) +||..+++.+|.+|.+++ +.++++|+||++|+++++++||+++.++|+.+++++||+++.+|+++|.++.++.... T Consensus 545 aDG~~~~~~~V~~G~itl----~~~~~~v~VGl~Y~s~i~~lp~~~~~~~g~~~g~~~ri~rv~lr~~~S~g~~~~~~~~ 620 (681) T protein:vir:10 545 ADGAVHPQRVVTDGAIDL----DVEAGTVHIGLPITAELQTLPVAMQLDGSFGQGRVKNINKLWLRVHRSSGIFAGPHAD 620 (681) T ss_pred eCCeecCcEeecCcEEEe----CcCCceEEEeeeceeEEEecceeeecCCcccCCceEEEEEEEEEEEcccceEEeeCCC Confidence 999999999999987765 6678999999999999999999999999999999999999999999999999875322 Q ss_pred cccccccccccc-cccCCCccccccCcEEEEeecCCcCcceEEEEEECCCcCEEEEEEEEEEEecc Q lcl|Aclame:pro 529 DDRSTDDIMDAR-LLDFSSNSGSSNGTRLVDYNPLGWENDGKMVIAVEQPFLCEVVGVFSVVQSNK 593 (594) Q Consensus 529 ~~~~~~~~~~~~-~~~~~~~~~~~tg~~~v~~~~~g~~~~~~v~I~~~~P~P~tIlai~~~v~~n~ 593 (594) ... + ...+ .......+++++|++++++ .++|+++.+|+|+|++|+||+|+||.+||++|- T Consensus 621 ~l~--~--~~~~~~~~~g~~~~l~TG~~~v~v-~~~~~~~~~v~I~qd~PlP~tvlsi~~ev~vgg 681 (681) T protein:vir:10 621 ALT--E--VKQRTSEPYGSPPALKSEEIPLVL-SPKWGDSGQLFVRQADPLPLMIVSMSAEIAIGA 681 (681) T ss_pred ceE--E--EEEeccccccccCCccCCeEEEEe-CCCcCcceEEEEEECCCcCEEEEEeeEEEEeeC Confidence 111 1 1111 1122334678999999875 568999999999999999999999999999999 No 5 >protein:vir:7329 Length: 825 # NCBI annotation: hypothetical protein # Family: family:all:780 # MgeID: mge:143 # MgeName: epsilon15 # Cross-refs: genbank:acc:NP_848220;genbank:gi:30387391;genbank:GeneID:2641863 Probab=100.00 E-value=1.3e-180 Score=1006.83 Aligned_cols=570 Identities=20% Similarity=0.265 Sum_probs=497.3 Q ss_pred CC-cccccccccceecchhcccchHHHHHHHHHhhcCcEEeecCCceecCcceeeeeeeCCCCCEEEEEEEeCCCceEEE Q lcl|Aclame:pro 1 MA-DFSQTSFKGGVIAPRLQFNEYESAYHHSIEDAVNFVVTEQGSLITRCGSEEVGLCQDGEVRLFRLPAVDAPSNDVIV 79 (594) Q Consensus 1 m~-~~~~~~f~~Ge~sp~l~~r~d~~~y~~~~~~~~N~~~~~~G~~~~rpg~~~~~~~~~~~~~~rlipF~~s~~q~y~l 79 (594) |+ +++|+||++|||||+|+||+||+||++||++||||+++||||++|||||+||+.+|++++++|||||+||++|+|+| T Consensus 1 m~~~~~q~sF~~GElsP~l~gR~Dl~~y~~g~~~~~N~~~~p~Gg~~rRpGt~fva~~~~~~~~~rLipF~fs~~q~y~L 80 (825) T protein:vir:73 1 MAFSWIQPSFAGGEIGPSLYGRIDMSKYQVALRKCDNFIVRQYGGVENRPGTRFVGPAKYPDRKCRLIPFQFSTVQTYAL 80 (825) T ss_pred CccceeccccccceechhhcccchHHHHHHHHHHhcCcEEEecCCceecCchHHhHhhcCCCCCEEEEEEEeCCCcEEEE Confidence 98 58999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred EEeCCeEEEEeCCceEEecccccccccceeecccchhhhccceeEecCcEEEEecCCccceeEEeeccCceeecccccc- Q lcl|Aclame:pro 80 EVGNTNIAVWVNDVRQVVANTPSEWRNTIDRIQTAYDTIGDDAGAANTGRLIMVHPALQPKRLYRDNNNAWQFVNMHTG- 158 (594) Q Consensus 80 e~g~~~~r~~~~~~~~~~~~~~~~~~~~~~~tpyta~~l~~i~~aq~adv~~~v~~~~~p~~L~R~~~~~w~~~~~~~~- 158 (594) |||++|||+|.++++++..++ .+++..|||+++++.+|+|+|++|++|++|+++||++|.|.++++|.+.++.+. T Consensus 81 efg~~~lrv~~~gg~v~~~~~----~~~e~~TPy~~~~l~~l~~~QsaD~~~i~h~~~pp~~L~r~~~~~W~l~~~~f~~ 156 (825) T protein:vir:73 81 EFGHNYMRVIKDGAYVLTTSN----VIYELAMPYADTDLFRIKFTQSADVLTLVHPAYPPKELRRYAHDNWQIVDVTTKN 156 (825) T ss_pred EEeCCeEEEEeCCceEeccCC----ceEEEecccchhhhhhheeeeecCEEEEEcCCCceeEEEEecCCCcEEEEEeccC Confidence 999999999999998765332 344566899999999999999999999999999999999999988888752110 Q ss_pred -------------------------------------------------------------------------------- Q lcl|Aclame:pro 159 -------------------------------------------------------------------------------- 158 (594) Q Consensus 159 -------------------------------------------------------------------------------- 158 (594) T Consensus 157 gp~~~in~~~sv~v~asg~tg~~TiTaS~a~~~~~~vG~~i~~~~~~v~si~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 236 (825) T protein:vir:73 157 GPFEDINVDETVKVYASASTGTITLTASSAIFGAEQVGKLFYLEQPAVDSVPVWETSKTTAINDVRRADSNYYRANTSGK 236 (825) T ss_pred CccccccccccceeeecccCceeEEEeeccccCchhcCeEEEEecccccccceeeeeeEEEeeeEEECCCceeeeecccc Confidence Q ss_pred -------------------------------------------------------------------------eeeeccc Q lcl|Aclame:pro 159 -------------------------------------------------------------------------AVPAEWS 165 (594) Q Consensus 159 -------------------------------------------------------------------------~~p~~~~ 165 (594) ....|++ T Consensus 237 ~~t~~~~a~~g~~~~~~~g~~~~~~~~~~~~~~~~~g~~~it~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~ 316 (825) T protein:vir:73 237 TGTLRPSHTEGMSWDGWGGTGSDDTGIQWEYLHSGFGIAKITAVAGDGLTATADVVSFIPSQVVGSANASYKWAKYAWNS 316 (825) T ss_pred cceeeccccCCceeEeeeeecccCCceEEEEEecCCceEEEeeccccceeeccccceecccccccCCCCCcccccCCccc Confidence 0001233 Q ss_pred cCCcceEEEEEeceEEEEeCCCCCcEEEEEeccccccccccccCCCCccEEEEE-cCCccEEEEEEcCCCEEEEecCcEE Q lcl|Aclame:pro 166 PSNYPQTVGIFQNRVWYVGSPVHRTYFWATRAGKLEDIAPSTANNPNDPISFVG-IMEGTPCWIIASSDVLTIGTTINDY 244 (594) Q Consensus 166 ~~g~Ps~v~f~~~RL~~~~~~~~p~~v~~S~~gd~~nF~~~t~~~d~d~i~~~~-s~~~~~i~~~~~~~~L~l~t~~~q~ 244 (594) .+|||++|+||||||+|+++++.||+|||||+|||+||+++++++|||||++.. +++.+.|.|+.+.++|+|||+++|| T Consensus 317 ~~gyPs~v~f~q~RL~f~g~~~~p~~v~~Srtgd~~nF~~~~~~~DdD~I~~~~s~~~~~~i~~~~~~~~L~~~t~~~e~ 396 (825) T protein:vir:73 317 VNGYPSTVVYYQQRLYFAASTAYPQTIWASRTGDYKDFGKNNPIQDDDRIIYTYAGRQVNEIRHLIDVGNLVALTSGGEY 396 (825) T ss_pred CCCCccEEEEEcceEEEeecCCCCCEEEEEccCCccccccCCCCCCCccEEEEEcCCcceeEEEEeecCcEEEEecCceE Confidence 567999999999999999999999999999999999999999999999999954 5667778777666899999999999 Q ss_pred EEecCCCcccCcceeEEEeeeecccCCcccEEeCCeEEEEEcCCCEEEEEEeeecccceeecchhhhhhhhhcccccccC Q lcl|Aclame:pro 245 QLAASTGVSVTAATAILRRSSVQGTAAVQGIPAEEQVIFCSRNKSKVYAMNYVREQDNWIPDEMSSQAQHLFTPISSAKG 324 (594) Q Consensus 245 ~l~~~~~~~lTP~~~~~~~~s~~g~~~~~Pv~~g~~v~F~~~~g~~v~e~~~~~~~d~~~~~dls~~a~hl~~~~~~~~~ 324 (594) +|+++++++|||+|++++++|.+||++++|+.+|++++|+|++|++||||.|++++|+|+++|+|++|+||++ + T Consensus 397 ~l~~~~~~~lTP~~~~~~~~s~~g~~~~~Pv~vg~~~~Fv~~~g~~vre~~~~~~~d~~~~~dlt~~a~hl~~------~ 470 (825) T protein:vir:73 397 TISGDQNKVLTPSAFSFSSQGNNGSSNVPPIAVANIALFIQEKGSVVRDLAYSFDVDGYQGTDLTILANHLFQ------K 470 (825) T ss_pred EEecCCCcccceeeEEEEeeeeeccccccceEeCCeEEEEeCCCCeEEEEEEeeecCceeccchhhhhHhhcc------C Confidence 9998777799999999999999999999999999999999999999999999999999999999999999986 3 Q ss_pred CceEEEEEeCCCCeEEEEEcCCCeEEEEEEecccceEeEEEeecCCCeEEEEEEEccCCCCEEEEEEEECCCCCcceeEE Q lcl|Aclame:pro 325 ASVRRVAYISDAAKSLWVVLENGQINYCCFDRTTDTKAWTQLELSGGKVIDIAAAFNPDSDYAYVAVVRSKAINGVQKNY 404 (594) Q Consensus 325 ~~i~~~a~~~~p~~~~~~~~~dg~~~~~ty~~eq~v~aW~~w~~~~g~v~~v~~~~~~~~d~~y~~v~r~~~~~g~~~~~ 404 (594) .++++|||+++|++++||+++||++++|+|++||+|.|||||++ +|+|++||++++.++|.+|++|+| ++||.+++| T Consensus 471 ~~~~~~a~~~~p~~~~~~v~~dg~l~~~ty~~~q~v~aW~~~~~-~g~v~~~~~i~~~~~D~l~~iV~R--~~~g~~~~y 547 (825) T protein:vir:73 471 HSIVDWSFCIVPYSSAFCIRDDGKLLVLTYLRDQQVFAWAPQSS-AGKYESTCSISEGSEDAVYFVVNR--TINGQTVRY 547 (825) T ss_pred CceEEEEEcCCCceEEEEEecCCeEEEEEEeccccceeeEEEec-CCcEEEEEEecCCCccEEEEEEEE--eeCCceEEE Confidence 57999999999999999999999999999999999999999998 899999999999999999999999 688999987 Q ss_pred EEEeccCcccccce----eeeee--------------------------------------------------------- Q lcl|Aclame:pro 405 TVLEKISSPRTDWK----RADGW--------------------------------------------------------- 423 (594) Q Consensus 405 ~~le~~~~~~~~~~----~~~~~--------------------------------------------------------- 423 (594) +|+|+...+.+. +.||. T Consensus 548 --iE~~~~~~~~~~~~~~~vD~g~~~~g~~~~~~l~~l~g~tv~~~~~g~~~~~v~~g~itl~~~~~~~i~l~~~~~~~~ 625 (825) T protein:vir:73 548 --IERLSSRLFTNDEDAFFVDCGLSYDGRNTSSRTMTISGGTGDWSYQVDYPVTVSGGAYFVNTDVGAQIQFPYTGTDPD 625 (825) T ss_pred --EEEecccccCCCcceeEEEEEeeecccceeeceeeeCCceEEEEeCCeEEEEEcCCeEEecccceEEEEecccCcccc Confidence 777753322111 11110 Q ss_pred ----------------------------------EEccCcc----cccccCCcccCceeEEEEeCCeeccCeEecCCceE Q lcl|Aclame:pro 424 ----------------------------------VVAQVNQ----NGDVLNLDRYIGRTAVIFSKYGLEAEVEVNNIGLT 465 (594) Q Consensus 424 ----------------------------------~~~~~~~----~~~~~~l~~l~g~tv~i~adg~~~~~~~v~~~~~t 465 (594) .++..++ ..+++||+||||++|.|++||.++++.+|.+|.++ T Consensus 626 ~~~~~~~~~~~~i~~~~~~~~v~v~~~~~~~a~~~~~~~t~~~~a~~~~~gL~hLeG~~v~v~~Dg~~~~~~~V~~G~vt 705 (825) T protein:vir:73 626 TNEPVAKELRGDIISVTSNTAVVVRFNRNVPPVLRNVATTNWQMARQTFSGLAHLEGQTVNILSDASVEPQKTVTGGAVT 705 (825) T ss_pred cccceeceeeEEEccccCceEEEEEecccccceeeeecccCCCcchheeccccccCCceEEEEECCeeeCCeEecCcEEE Confidence 0111111 12458999999999999999999999999999888 Q ss_pred EEEecCCCCCeEEEeEeeeeEEEecceeeeCCCCccceeeEEEEEEEEEEEcccceEEeeeeccccccccccccccccCC Q lcl|Aclame:pro 466 HRINGYDPNTVYYVGYKMDSYFRTLTPSNGDMKKSMFGSKIRISKVQLALFDSIEPTVNGEPADDRSTDDIMDARLLDFS 545 (594) Q Consensus 466 l~~~~~~~~~~v~VG~~y~~~v~~~~~~~~~~~g~~~~~~~ri~~v~v~l~~S~g~~v~~~~~~~~~~~~~~~~~~~~~~ 545 (594) | +.++++|+|||+|++++++|||++..+ |++++++|||+++.+||++|.+++++..... ..+.......... T Consensus 706 l----~~~~~~v~vGl~y~~~~~~l~~~~~~~-g~~~g~~~ri~~~~~~~~~s~~~~~g~~~~~---l~~~~~r~~~~~~ 777 (825) T protein:vir:73 706 L----ESPGAVVHIGLPITAEFETLDININGQ-ETLLDKKQVIPTVTMVVNASRGIWATTPGGT---WYEYPQREFEFYD 777 (825) T ss_pred e----cCCceEEEEeeCccceEEecccccCCC-ccccCccEEEEEEEEEEEeeeeEEEecCCCc---ceEeeccCCCccc Confidence 7 568899999999999999999999865 9999999999999999999999999753221 1111111122334 Q ss_pred CccccccCcEEEEeecCCcCcceEEEEEECCCcCEEEEEEEEEEEeccC Q lcl|Aclame:pro 546 SNSGSSNGTRLVDYNPLGWENDGKMVIAVEQPFLCEVVGVFSVVQSNKV 594 (594) Q Consensus 546 ~~~~~~tg~~~v~~~~~g~~~~~~v~I~~~~P~P~tIlai~~~v~~n~~ 594 (594) ..+++++|++++.. .+||+++++|+|+|++|||||||||++++++|-- T Consensus 778 ~~~~~~tG~~~~~~-~~~~~~~~~~~i~q~~PlP~tvlav~~~~~~~g~ 825 (825) T protein:vir:73 778 DPVDDATGKVEVKL-DSNWDKNGRVKVRQLDPLPLSVLAVLPRLTVGGF 825 (825) T ss_pred CCCccccCcEEEec-CCCCCCccEEEEEEcCCCCEEEEEEEEEEEecCC Confidence 45689999999875 4799999999999999999999999999999999 No 6 >protein:vir:95324 Length: 823 # NCBI annotation: hypothetical protein # Family: family:all:780 # MgeID: mge:1564 # MgeName: phiV10 # Cross-refs: genbank:acc:YP_512269;genbank:gi:89152436;genbank:GeneID:3952993 Probab=100.00 E-value=7.3e-174 Score=969.78 Aligned_cols=570 Identities=20% Similarity=0.256 Sum_probs=496.5 Q ss_pred CC-cccccccccceecchhcccchHHHHHHHHHhhcCcEEeecCCceecCcceeeeeeeCCCCCEEEEEEEeCCCceEEE Q lcl|Aclame:pro 1 MA-DFSQTSFKGGVIAPRLQFNEYESAYHHSIEDAVNFVVTEQGSLITRCGSEEVGLCQDGEVRLFRLPAVDAPSNDVIV 79 (594) Q Consensus 1 m~-~~~~~~f~~Ge~sp~l~~r~d~~~y~~~~~~~~N~~~~~~G~~~~rpg~~~~~~~~~~~~~~rlipF~~s~~q~y~l 79 (594) |. +++|+||++|||||+|++|+||+||+++|++|+||+++|+||++|||||+||++++++++++|||||+||++|+|+| T Consensus 1 m~i~~~q~sF~~GElsP~l~gR~Dl~ry~~q~~~~~N~~~~~~GGl~rRpGt~fva~~~~~~g~~rLipf~~s~~q~y~L 80 (823) T protein:vir:95 1 MAISWIQPSFAGGEIGPSLYGRIDMAKYQVALRKCDNFIVRQYGGVENRPGTRFVGAAKYPNRKCRLIPFQFSTVQTYAL 80 (823) T ss_pred CcceeechhccCceechheeccchHHHHHHHHhhhhCcEeeecCCceecCchhhhhhhcCCCCCeeEEEEEeCCCcEEEE Confidence 98 46899999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred EEeCCeEEEEeCCceEEecccccccccceeecccchhhhccceeEecCcEEEEecCCccceeEEeeccCceeeccccc-- Q lcl|Aclame:pro 80 EVGNTNIAVWVNDVRQVVANTPSEWRNTIDRIQTAYDTIGDDAGAANTGRLIMVHPALQPKRLYRDNNNAWQFVNMHT-- 157 (594) Q Consensus 80 e~g~~~~r~~~~~~~~~~~~~~~~~~~~~~~tpyta~~l~~i~~aq~adv~~~v~~~~~p~~L~R~~~~~w~~~~~~~-- 157 (594) |||+++||+|.++++++..+ ...+...+||+++++.+|+|+|++|++|++|++++|++|.|.++++|.+.+..+ T Consensus 81 efg~~~irV~~~~g~vv~~~----~~~~ev~tPy~~~~l~~Lr~~qsaD~~fivh~~~~p~~L~r~~~~~w~l~~~~~~~ 156 (823) T protein:vir:95 81 EFGHQYMRVIKDGALVLNSS----NVIYEIATPYTEADLFRIKFTQSADVLTLVHPAYPPKELRRYAHDNWQLVDVVTKN 156 (823) T ss_pred EEcCCeEEEEeCCcEEEecC----CceeEEecccccccccceeEEEeccEEEEEcCCccceEEEecCCCCceEEEEEEec Confidence 99999999999999886543 334566799999999999999999999999999999999999998886654311 Q ss_pred -------------------------------------------------------------------------------- Q lcl|Aclame:pro 158 -------------------------------------------------------------------------------- 157 (594) Q Consensus 158 -------------------------------------------------------------------------------- 157 (594) T Consensus 157 gp~~~~~~~~t~~v~~~~~~~~~t~ta~~~~~~~d~vg~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (823) T protein:vir:95 157 GPFEDINIDESLTVYASASTGTITLTASASIFGAEQVGKLFYLEQPAVDSVPVWETSKSTSIGDIRRADSNYYRAVTAGK 236 (823) T ss_pred cccccccccceeEEeccccCceeEEeecccccchhhccceEEEeccccceeeecceeeeecccceEEecccceeeeeccc Confidence Q ss_pred ----------------------------------------------------------------------ceeeeccccC Q lcl|Aclame:pro 158 ----------------------------------------------------------------------GAVPAEWSPS 167 (594) Q Consensus 158 ----------------------------------------------------------------------~~~p~~~~~~ 167 (594) |...+|++.+ T Consensus 237 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~v~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~~ 316 (823) T protein:vir:95 237 TGTLRPSHTEGTSWDGWGGSGDDDTGIEWEYLHSGFGIARITAVNGTTATAEVISYIPSQVVGEDNASYKWAKYAWNSVN 316 (823) T ss_pred cceeecccCCcceEEeceecccccceeEEEEEeCCcceEEEEeecceeeeceEeeeeccccccCCcCCccccccccCcCC Confidence 0112244567 Q ss_pred CcceEEEEEeceEEEEeCCCCCcEEEEEeccccccccccccCCCCccEEEEE-cCCccEEEEEEcCCCEEEEecCcEEEE Q lcl|Aclame:pro 168 NYPQTVGIFQNRVWYVGSPVHRTYFWATRAGKLEDIAPSTANNPNDPISFVG-IMEGTPCWIIASSDVLTIGTTINDYQL 246 (594) Q Consensus 168 g~Ps~v~f~~~RL~~~~~~~~p~~v~~S~~gd~~nF~~~t~~~d~d~i~~~~-s~~~~~i~~~~~~~~L~l~t~~~q~~l 246 (594) |||++|+||||||+|+++++.||+|||||+|||+||+++++++|||||+++. +++.+.|.|+.+.++|+|||+++||+| T Consensus 317 g~Ps~v~f~q~RL~f~g~~~~p~~v~~Srtgd~~nF~~~~~~~DdD~I~~~~s~~~~~~i~~~v~~~~Lli~t~~~e~~l 396 (823) T protein:vir:95 317 GYPGTVVYYQQRLYFAASTAFPQTIWASRTGDYKDFGKSNPTQDDDRIIYTYAGRQVNEIRHLIDVGSLVALTSGGEYVI 396 (823) T ss_pred CCccEEEEEeceEEEEEcCCCCcEEEEeccCCccccccccCCCCCCcEEEEEcCCcceEEEEEeecCcEEEEecCcEEEE Confidence 8999999999999999999999999999999999999999989999999954 566777766666679999999999999 Q ss_pred ecCCCcccCcceeEEEeeeecccCCcccEEeCCeEEEEEcCCCEEEEEEeeecccceeecchhhhhhhhhcccccccCCc Q lcl|Aclame:pro 247 AASTGVSVTAATAILRRSSVQGTAAVQGIPAEEQVIFCSRNKSKVYAMNYVREQDNWIPDEMSSQAQHLFTPISSAKGAS 326 (594) Q Consensus 247 ~~~~~~~lTP~~~~~~~~s~~g~~~~~Pv~~g~~v~F~~~~g~~v~e~~~~~~~d~~~~~dls~~a~hl~~~~~~~~~~~ 326 (594) +++++++|||+|++++++|++||++++|+.+|++++|+|++|++||||.|++++|+|+++|+|++|+||++ +.+ T Consensus 397 ~~~~~~~lTP~~~~~~~~s~~g~~~~~Pv~vg~~~~Fv~~~g~~vre~~~~~~~d~~~~~dlT~~a~hl~~------~~~ 470 (823) T protein:vir:95 397 TGDQNKVLTPSSFAFSSQGSNGSSNVPPIAVANIALFVQEKGSVVRDLAYSFDVDGYQGNDLTILANHLFQ------KHS 470 (823) T ss_pred EcCCCcccceeeEEEEEeeccccccccceEeCCeEEEEecCCCEEEEEEEeeecCceecchhhhhhhhhcC------CCc Confidence 98877799999999999999999999999999999999999999999999999999999999999999986 468 Q ss_pred eEEEEEeCCCCeEEEEEcCCCeEEEEEEecccceEeEEEeecCCCeEEEEEEEccCCCCEEEEEEEECCCCCcceeEEEE Q lcl|Aclame:pro 327 VRRVAYISDAAKSLWVVLENGQINYCCFDRTTDTKAWTQLELSGGKVIDIAAAFNPDSDYAYVAVVRSKAINGVQKNYTV 406 (594) Q Consensus 327 i~~~a~~~~p~~~~~~~~~dg~~~~~ty~~eq~v~aW~~w~~~~g~v~~v~~~~~~~~d~~y~~v~r~~~~~g~~~~~~~ 406 (594) |++|||+++|++++||+++||++++|+|++||+|.|||||++ +|+|++||++++..+|++|++|+| ++||++++| T Consensus 471 i~~~a~~~~p~~~~~~v~~dG~l~~~ty~~~q~v~aW~~~~~-~g~~~~~~~i~~~~~d~l~~~v~R--~i~g~~~~y-- 545 (823) T protein:vir:95 471 IVDWCFSIVPYSSAFCIRDDGKLLVMTYLRDQQVFAWAPQSS-TGKYESTCSISEGNEDAVYFVVNR--TVNGQTVRY-- 545 (823) T ss_pred eEEEEEecCCCeEEEEEecCCcEEEEEEecccceeeeEEEec-CCcEEEEEEecCCCCCEEEEEEEe--ccCCeEEEE-- Confidence 999999999999999999999999999999999999999998 799999999999999999999999 689999987 Q ss_pred EeccCcccccc----eeeeee----------------------------------------------------------- Q lcl|Aclame:pro 407 LEKISSPRTDW----KRADGW----------------------------------------------------------- 423 (594) Q Consensus 407 le~~~~~~~~~----~~~~~~----------------------------------------------------------- 423 (594) +|+|+...+.. .+.||. T Consensus 546 iE~~~~~~~~~~~~~~~lD~~~s~~g~~~~~~~~~l~~g~~~l~~l~g~~v~~adg~~~~~~~v~g~i~l~~~~~~~~vG 625 (823) T protein:vir:95 546 IERLSSRLFTSDEDAFFVDSGLSYDGRNTSDRTMTITGGSGEWDYLAEYTISVSGGAYFTSSDVGAQLQFPYTGADPDTG 625 (823) T ss_pred EEeeccccCCCccceeEEEEEEEeecCcccceeeEecCCCCcccccCceEEEecCcceECCccceeEEEeCcCCCccccc Confidence 78875322110 000000 Q ss_pred --------------------------------EEccC----cccccccCCcccCceeEEEEeCCeeccCeEecCCceEEE Q lcl|Aclame:pro 424 --------------------------------VVAQV----NQNGDVLNLDRYIGRTAVIFSKYGLEAEVEVNNIGLTHR 467 (594) Q Consensus 424 --------------------------------~~~~~----~~~~~~~~l~~l~g~tv~i~adg~~~~~~~v~~~~~tl~ 467 (594) ..+.. ....+++||+||||++|.|++||.++++.+|.+|.++| T Consensus 626 l~~~~~i~~~~~~v~~~~a~~~~~~r~v~a~l~~~~t~~~~~~~~~~~gL~hleg~tv~v~~dg~~~~~~~v~~G~vtl- 704 (823) T protein:vir:95 626 YEVSKELRCDIISVTSNTAVVVRANRNVPPSLRNVATTNWQMARRTFGGLSHLEGQTVNILSDANVEPQKVVSGGAVTL- 704 (823) T ss_pred cceEEEEEEeeceeeCCceEEEccCCcccceeeeeeccccccccceeeeccccccceEEEEEcCeeeCCeEecCCEEEe- Confidence 00000 01234678999999999999999999999999998777 Q ss_pred EecCCCCCeEEEeEeeeeEEEecceeeeCCCCccceeeEEEEEEEEEEEcccceEEeeeeccccccccccccccccCCCc Q lcl|Aclame:pro 468 INGYDPNTVYYVGYKMDSYFRTLTPSNGDMKKSMFGSKIRISKVQLALFDSIEPTVNGEPADDRSTDDIMDARLLDFSSN 547 (594) Q Consensus 468 ~~~~~~~~~v~VG~~y~~~v~~~~~~~~~~~g~~~~~~~ri~~v~v~l~~S~g~~v~~~~~~~~~~~~~~~~~~~~~~~~ 547 (594) +.++++|+||++|+++++|||+++.. +|++++++|||+++.++|++|.|+.++..... .++........+... T Consensus 705 ---~~~~~~v~vGl~~~~~~~~l~~~~~~-~g~~~g~~~ri~~~~~~~~~s~~~~~g~~~~~---l~~~~~r~~~~~~~~ 777 (823) T protein:vir:95 705 ---ESPGAVVHIGLPITAEFETLDINING-QETLLDKKQVIPSVTLVVNASRGIWATTPGGK---WYEYPQREFEFYDDP 777 (823) T ss_pred ---cCCCCEEEEeecceeeEEecchhcCC-CcccCCceeEEeEEEEEEEeeeeEEEecCCCc---eeEeeccCCCcccCC Confidence 56789999999999999999999986 49999999999999999999999999753221 111111122334455 Q ss_pred cccccCcEEEEeecCCcCcceEEEEEECCCcCEEEEEEEEEEEeccC Q lcl|Aclame:pro 548 SGSSNGTRLVDYNPLGWENDGKMVIAVEQPFLCEVVGVFSVVQSNKV 594 (594) Q Consensus 548 ~~~~tg~~~v~~~~~g~~~~~~v~I~~~~P~P~tIlai~~~v~~n~~ 594 (594) +++++|++++.. .++|+++++|+|+|++|||||||||+++|++|-- T Consensus 778 ~~~~tG~~~~~~-~~~~~~~~~~~i~q~~plp~tvl~v~~~~~~~g~ 823 (823) T protein:vir:95 778 VDDATGKVEVKL-DSNWGKNGRVKIRQLDPLPLSVLAVIPRLTVGGF 823 (823) T ss_pred CCcccceEEEec-CCCcCCccEEEEEEcCCCceEEEEEEEEEEecCC Confidence 678999999875 4799999999999999999999999999999999 No 7 >protein:vir:103790 Length: 768 # NCBI annotation: hypothetical protein # Family: family:all:780 # MgeID: mge:1645 # MgeName: BcepC6B # Cross-refs: genbank:acc:YP_024932;genbank:gi:48697202;genbank:GeneID:2846114 Probab=100.00 E-value=2e-170 Score=950.99 Aligned_cols=573 Identities=18% Similarity=0.267 Sum_probs=494.7 Q ss_pred CCcc--cccccccceecchhcccchHHHHHHHHHhhcCcEEeecCCceecCcceeeeeeeCCCCCEEEEEEEeCCCceEE Q lcl|Aclame:pro 1 MADF--SQTSFKGGVIAPRLQFNEYESAYHHSIEDAVNFVVTEQGSLITRCGSEEVGLCQDGEVRLFRLPAVDAPSNDVI 78 (594) Q Consensus 1 m~~~--~~~~f~~Ge~sp~l~~r~d~~~y~~~~~~~~N~~~~~~G~~~~rpg~~~~~~~~~~~~~~rlipF~~s~~q~y~ 78 (594) |+++ +|+||++|||||+|++|+||+||+++|++|+||+++||||++|||||+||++++++++++|||||+|+++|+|+ T Consensus 1 M~~~~~~~~~F~~GelsP~l~~r~Dl~ry~~~~~~~~N~~~~~~gGl~rRpGt~fv~~~~~~~~~~~lipf~~~~~~~y~ 80 (768) T protein:vir:10 1 MPKAAPQQVSFDAGELSPLLGARVDLAKYPNGCQVMENFIATVQGPAIRRGGKRFVAATKDSTKQSWLLPFIVADGIAYM 80 (768) T ss_pred CCcceeeeeeccCceechhhcccchHHHHHHHHhhhhcceeeecCCceecCchhhhhhhcCCCCCeeEEEEEecCccEEE Confidence 9985 89999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred EEEeCCeEEEEeCCceEEecccccccccceeecccchhhh------ccceeEecCcEEEEecCCccceeEEeeccCceee Q lcl|Aclame:pro 79 VEVGNTNIAVWVNDVRQVVANTPSEWRNTIDRIQTAYDTI------GDDAGAANTGRLIMVHPALQPKRLYRDNNNAWQF 152 (594) Q Consensus 79 le~g~~~~r~~~~~~~~~~~~~~~~~~~~~~~tpyta~~l------~~i~~aq~adv~~~v~~~~~p~~L~R~~~~~w~~ 152 (594) ||||+++||+|..++.++..+.+. +..+||+++++ .+|+|+|++|++|++|++++|++|.|.++++|.+ T Consensus 81 l~fg~~~irv~~~~g~v~~~~~~~-----e~~tp~~~~~l~~~~~~~~L~~~q~aD~~~i~~~~~~p~~l~r~~~~~w~l 155 (768) T protein:vir:10 81 LEFGDHYIRFFVNRGQLVNAGAPV-----EIATPYALADLTTEDGTFAIRATQSADTMYLFHGGYPTQKLLRTSATTFSL 155 (768) T ss_pred EEEcCCEEEEEECCcEEEecCeeE-----EEEcCCCcceeecccccceeEEEeecCEEEEEcCCcceeEEEEecCCCcee Confidence 999999999999999987654433 44589999988 4699999999999999999999999999888853 Q ss_pred cccccc-------------------------------------------------------------------------- Q lcl|Aclame:pro 153 VNMHTG-------------------------------------------------------------------------- 158 (594) Q Consensus 153 ~~~~~~-------------------------------------------------------------------------- 158 (594) .+..+. T Consensus 156 ~~~~~~~gp~~~~n~~~~vti~~s~~~~~~T~tasa~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 235 (768) T protein:vir:10 156 QPVTFVGGPFAAVNSDNNVRVHASAGTGAVTLVASASVFRPSDVGTLFYLEQEDNSFVKPWVVHQKIGPSELRRVGDRVY 235 (768) T ss_pred EEeeecCccccccccceeEEEEecccceeEEEeecCCccchhhcceeeeeeeeccccccccEEEEeeeeEEEEecCCceE Confidence 322110 Q ss_pred -------------------------------------------------------------------------------- Q lcl|Aclame:pro 159 -------------------------------------------------------------------------------- 158 (594) Q Consensus 159 -------------------------------------------------------------------------------- 158 (594) T Consensus 236 ~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~t~~~~~~~~~~~~~~~ 315 (768) T protein:vir:10 236 LCTAVGTATPQVTGTETPTHTSGSRWDGTGQDESATDEYGSIGAEWEYQHSGYGTVLITGYTNDQVVTGTVATNDPADPG 315 (768) T ss_pred EeeeeccccccccceeccccccCceEEEecCcccccccccccceEEEEEEcCCceEEEEEecCCeeEEeeeeeecCcccc Confidence Q ss_pred ---------------eeeeccccCCcceEEEEEeceEEEEeCCCCCcEEEEEeccccccccccccCC--CCccEEEEE-c Q lcl|Aclame:pro 159 ---------------AVPAEWSPSNYPQTVGIFQNRVWYVGSPVHRTYFWATRAGKLEDIAPSTANN--PNDPISFVG-I 220 (594) Q Consensus 159 ---------------~~p~~~~~~g~Ps~v~f~~~RL~~~~~~~~p~~v~~S~~gd~~nF~~~t~~~--d~d~i~~~~-s 220 (594) ....|++++|||++|+||||||+|++ |++|||||+|||+||+++++.+ |||||+++. + T Consensus 316 ~~~~~~~~~~~t~~~~~~~~~~~~g~Ps~v~f~q~RL~f~~----~~~v~~Srtgd~~nF~~~s~~~~~DdD~I~~~~ss 391 (768) T protein:vir:10 316 MLPNTVVTLTGTYKWARSLFNSTDGFPQMGTFWRNRLCLMR----DRWLAMSVSADFETFKTKDADQQTDDSAIVQQLNA 391 (768) T ss_pred cccccccccCCCcccccCCCcCCCCCceEEEEEeeeEEEee----CCEEEEEcccccccccccccccccCCccEEEEecC Confidence 00123446679999999999999998 6799999999999999999765 999999955 5 Q ss_pred CCccEEEEEEcCCCEEEEecCcEEEEecCC-CcccCcceeEEEeeeecccCCcccEEeCCeEEEEEcCCCEEEEEEeeec Q lcl|Aclame:pro 221 MEGTPCWIIASSDVLTIGTTINDYQLAAST-GVSVTAATAILRRSSVQGTAAVQGIPAEEQVIFCSRNKSKVYAMNYVRE 299 (594) Q Consensus 221 ~~~~~i~~~~~~~~L~l~t~~~q~~l~~~~-~~~lTP~~~~~~~~s~~g~~~~~Pv~~g~~v~F~~~~g~~v~e~~~~~~ 299 (594) ++.+.|.|+.+.++|+|||+++||+|++++ +++|||+|++++++|.+||++++|+.+|++++|+|++|++||||.|+++ T Consensus 392 ~~~~~i~~~v~~~~L~i~T~~~q~~l~~~~~~~~lTP~~~~i~~~s~~g~~~~~Pv~vG~~v~fv~~~g~~vre~~y~~~ 471 (768) T protein:vir:10 392 RQLNKLAWMVESDSLLIGMTGDEWVIGPANASQPVSAANLNAARRTSYGSKRIQPVQVGGTIMFVQKAGRKLRDFKYDFS 471 (768) T ss_pred CcceeEEEEeecCcEEEEecCceEEEecCCCCcccccceEEEEEeehhcccccccEEeCCeEEEEcCCCCEEEEEEeeee Confidence 666777666556899999999999999865 5789999999999999999999999999999999999999999999999 Q ss_pred ccceeecchhhhhhhhhcccccccCCceEEEEEeCCCCeEEEEEcCCCeEEEEEEecc---cceEeEEEeecCCCeEEEE Q lcl|Aclame:pro 300 QDNWIPDEMSSQAQHLFTPISSAKGASVRRVAYISDAAKSLWVVLENGQINYCCFDRT---TDTKAWTQLELSGGKVIDI 376 (594) Q Consensus 300 ~d~~~~~dls~~a~hl~~~~~~~~~~~i~~~a~~~~p~~~~~~~~~dg~~~~~ty~~e---q~v~aW~~w~~~~g~v~~v 376 (594) +|+|+++|+|++++||+++... ...+|++||++++|++++||+++||++++|+|++| |+|.|||||++++|+|++| T Consensus 472 ~d~y~a~DlT~~a~hl~~~~~~-~~~~i~~~a~~~~p~~v~~~v~~dg~l~~~ty~~e~~~q~v~aW~~~~~~~g~v~~v 550 (768) T protein:vir:10 472 SDNYVSTDVTKIADHITRGRAG-TNSGIMSLCFQQEPHSVVWAARADGQLIGCTYDEEAGRSDVYGWHRHPDANGFVECV 550 (768) T ss_pred cCceecchhhhhhhhhccccCc-cccceeeEEEeecCCeEEEEEecCCeEEEEEEecCCCceeEEeEEEEEcCCCEEEEE Confidence 9999999999999999987543 34679999999999999999999999999999998 7889999999989999999 Q ss_pred EEEccCC--CCEEEEEEEECCCCCcceeEEEEEeccCccccc------ceeeeeeEEccCcccccccCCcccCceeEEEE Q lcl|Aclame:pro 377 AAAFNPD--SDYAYVAVVRSKAINGVQKNYTVLEKISSPRTD------WKRADGWVVAQVNQNGDVLNLDRYIGRTAVIF 448 (594) Q Consensus 377 ~~~~~~~--~d~~y~~v~r~~~~~g~~~~~~~le~~~~~~~~------~~~~~~~~~~~~~~~~~~~~l~~l~g~tv~i~ 448 (594) |++++.+ +|.+|++|+| +++|..+|| +|+|+..... ..+.||..........++++++|++|+++.++ T Consensus 551 ~~i~~~~g~~d~l~~~v~r--~~~g~~~~~--ie~l~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~gl~~leg~~v~v~ 626 (768) T protein:vir:10 551 ASMPAPDGASDDLWVIVRR--QVNGQTVRY--VEYLNPALQDDEPQSSAFYVDAGITYNGVPTSTIAGLGHLEGVTVAVL 626 (768) T ss_pred EEEecCCCCccEEEEEEEe--cCCCeEEEE--EEecCcccccccccccceEeccccccCCcceeeecCCCCcccceEEEE Confidence 9998654 6999999999 578888887 7888865432 23344444433344557899999999999999 Q ss_pred eCCeeccCeEecCCceEEEEecCCCCCeEEEeEeeeeEEEecceeeeCCCCccceeeEEEEEEEEEEEcccceEEeeeec Q lcl|Aclame:pro 449 SKYGLEAEVEVNNIGLTHRINGYDPNTVYYVGYKMDSYFRTLTPSNGDMKKSMFGSKIRISKVQLALFDSIEPTVNGEPA 528 (594) Q Consensus 449 adg~~~~~~~v~~~~~tl~~~~~~~~~~v~VG~~y~~~v~~~~~~~~~~~g~~~~~~~ri~~v~v~l~~S~g~~v~~~~~ 528 (594) +||..+++..|.++++++ +.++++|+||++|+++++++||++++++|+.+++++||+|++|++++|+++.++.. T Consensus 627 ~dG~~~~~~~v~~g~itl----~~~~~~v~vG~~y~s~~~~~p~~~~~~~gs~~~~~~ri~r~~v~~~~S~~~~~~~~-- 700 (768) T protein:vir:10 627 TDGAVHPSRTVTAGAITL----DWSASIVHIGVPTTCRIQTMQLNAGAANGTAQGKTKRVTNIATRFSRSLGGVVGPT-- 700 (768) T ss_pred ECCEeccCceecCCEEEe----CCCCceEEEeEeeeEEEEecceEeecCCccccccceEEEEEEEEEecccceEEEec-- Confidence 999999999999887665 67889999999999999999999999999999999999999999999999988632 Q ss_pred cccccccccccccc--cCCCccccccCcEEEEeecCCcCcceEEEEEECCCcCEEEEEEEEEEEeccC Q lcl|Aclame:pro 529 DDRSTDDIMDARLL--DFSSNSGSSNGTRLVDYNPLGWENDGKMVIAVEQPFLCEVVGVFSVVQSNKV 594 (594) Q Consensus 529 ~~~~~~~~~~~~~~--~~~~~~~~~tg~~~v~~~~~g~~~~~~v~I~~~~P~P~tIlai~~~v~~n~~ 594 (594) ..+...+....+.. .....+++++|++++++ +++|+++.+|+|+|++|+||+||||++++++|+= T Consensus 701 ~~~~~~~~~~~r~~~~~~~~~~~l~TG~~~v~~-~~~~~~~~~i~i~~d~P~P~tvlsi~~~~~~nd~ 767 (768) T protein:vir:10 701 FDDNDLEQLSFRKPSNAMDRAVPLFDGDMESDW-RGGYEGQSWICYQNDQPLPVTLLGFFPILDTQDD 767 (768) T ss_pred CCCCCceeeeeEecCcccCccCCcccCEEEEEe-cCCCCcceEEEEEECCCCCEEEEEEEEEEEEeec Confidence 11111111111111 12234678899999986 5679999999999999999999999999999999 No 8 >protein:vir:99677 Length: 794 # NCBI annotation: Tail tubular protein B # Family: family:all:825 # MgeID: mge:1523 # MgeName: VP4 # Cross-refs: genbank:acc:YP_249591;genbank:gi:68299742;genbank:GeneID:3799992 Probab=100.00 E-value=3.6e-136 Score=763.10 Aligned_cols=559 Identities=12% Similarity=0.039 Sum_probs=435.5 Q ss_pred CCcc--cccccccceecchhcccchHHHHHHHHHhhcCcEEeecCCceecCcceeeeeeeCC---CCCEEEEEEEeCCCc Q lcl|Aclame:pro 1 MADF--SQTSFKGGVIAPRLQFNEYESAYHHSIEDAVNFVVTEQGSLITRCGSEEVGLCQDG---EVRLFRLPAVDAPSN 75 (594) Q Consensus 1 m~~~--~~~~f~~Ge~sp~l~~r~d~~~y~~~~~~~~N~~~~~~G~~~~rpg~~~~~~~~~~---~~~~rlipF~~s~~q 75 (594) |+.| +.+||.+| +.+|.|++||.++|++|+||++.|+||++||||++||++++++ +.++||+||+|+++| T Consensus 1 M~~i~~s~~n~~~G-----vS~q~D~~ry~~q~~~~~N~~~~~~gG~~rRpG~~fv~~l~~~~~~~~~~~l~~f~~~~~~ 75 (794) T protein:vir:99 1 MALISQSIKNLKGG-----ISQQPDILRYSDQGSKQINGFSSEVEGLQKRPPSVHIKRLTDQFGLGQKPYCHIINRDEVE 75 (794) T ss_pred Cceeeeecchhhcc-----eecCCchHHhhhhHhhhhcceeeeccCcccCCccceeeeecCCCCCccccEEEEEEeCCCc Confidence 9998 68999999 6699999999999999999999999999999999999999876 446899999999999 Q ss_pred eEEEEEeCCeEEEEeCC-ceEEecccccccccceeecccchhhhccceeEecCcEEEEecCCccceeEEee------ccC Q lcl|Aclame:pro 76 DVIVEVGNTNIAVWVND-VRQVVANTPSEWRNTIDRIQTAYDTIGDDAGAANTGRLIMVHPALQPKRLYRD------NNN 148 (594) Q Consensus 76 ~y~le~g~~~~r~~~~~-~~~~~~~~~~~~~~~~~~tpyta~~l~~i~~aq~adv~~~v~~~~~p~~L~R~------~~~ 148 (594) +|+|||+++++|+|... +.......+. ....++++..+.+|+|+|++|++|++|++++|+++... ... T Consensus 76 ~y~l~f~~~~irv~~~~~g~~~~v~~~~-----~~~y~~~~~~~~~l~~~q~aD~~fi~n~~~~p~~~~~~~~~~~~~~~ 150 (794) T protein:vir:99 76 RYAVFFTGSNIRVFDLFTGDEKTVNAPN-----GLSYVSSSNPRKDLRMVTVADYTFILNRNVATAQGTTNTPSGLAPFG 150 (794) T ss_pred eEEEEEcCCeEEEEECCCCeEEEeeccc-----cccccccCCccceeeEEEEccEEEEEcCCeeeeEeeeeccccCcCCC Confidence 99999999999999643 4333322211 11235677778899999999999999999999865311 000 Q ss_pred cee----------------------------------------------------------------------------- Q lcl|Aclame:pro 149 AWQ----------------------------------------------------------------------------- 151 (594) Q Consensus 149 ~w~----------------------------------------------------------------------------- 151 (594) .|. T Consensus 151 ~~~~~~v~~g~y~~~y~v~i~gs~ta~~~tp~~~~~~~~~~~s~~~ia~~l~~~l~~~g~~v~~~~g~~~i~~~~~~~v~ 230 (794) T protein:vir:99 151 HFGLVVIRGGQYGRTYRIKVNGSVEASFETPLGDQVAHAKQIDIAYIIDQLAAGLINKGWAVTKGSGYFYFSKSGSVIIN 230 (794) T ss_pred ceEEEEeccCCCCceEEEEecCCcccceeeccCcccccccccchhhhhhhhHhhhhcccceEEeCCeEEEEEecCCceeE Confidence 000 Q ss_pred -------------------------------------------------------------------------------- Q lcl|Aclame:pro 152 -------------------------------------------------------------------------------- 151 (594) Q Consensus 152 -------------------------------------------------------------------------------- 151 (594) T Consensus 231 t~s~~~g~~~t~~~~~~~~v~~~~~Lp~~~~~G~~v~v~~~~~~~~~~y~v~~~~~~~~w~e~~~~~~~~~~~~~t~p~~ 310 (794) T protein:vir:99 231 SLEVEDGYNGQLAWGIINDVQKTTQLPVYAPNNYIIRVSGDPTLNQDDYYVRFDASRNVWTECPAPNIKADYNKATMPHV 310 (794) T ss_pred EEEeecCCCCceeeEEeeeccceeecccCCCCCeEEEEeccCCCCCCceEEEEEcCCceEEeeccceeecceeccceEEE Confidence Q ss_pred ----------ecccccceeeecc-ccCCcce-------EEEEEeceEEEEeCCCCCcEEEEEecccccccccccc--CCC Q lcl|Aclame:pro 152 ----------FVNMHTGAVPAEW-SPSNYPQ-------TVGIFQNRVWYVGSPVHRTYFWATRAGKLEDIAPSTA--NNP 211 (594) Q Consensus 152 ----------~~~~~~~~~p~~~-~~~g~Ps-------~v~f~~~RL~~~~~~~~p~~v~~S~~gd~~nF~~~t~--~~d 211 (594) +++..|..+...+ .++++|+ .|+||||||+|+++ ++|||||+||||||+++++ ..| T Consensus 311 ~v~~~~~~~~~~~~~w~~r~~Gd~~tnp~psf~g~~is~v~f~q~RL~f~~~----~~v~~Srtgd~~nF~~~t~~~~~D 386 (794) T protein:vir:99 311 LIREADGTFTFKQADWTHRAAGDDETNPYPSFIGNSINDIFFFRNRLGFLSG----ENVILSGSGNYFNFFPESVAVLTD 386 (794) T ss_pred EeccCCCceeEeeccccccccCCcccCCCccccCcceeEEEEEeeeEEEecC----CeEEEEecCCccccccccccCCCC Confidence 0000000000011 1234564 48999999999986 5799999999999999985 469 Q ss_pred CccEEEEE-cCCccEEE-EEEcCCCEEEEecCcEEEEecCCCcccCcceeEEEeeeec-ccCCcccEEeCCeEEEEEcCC Q lcl|Aclame:pro 212 NDPISFVG-IMEGTPCW-IIASSDVLTIGTTINDYQLAASTGVSVTAATAILRRSSVQ-GTAAVQGIPAEEQVIFCSRNK 288 (594) Q Consensus 212 ~d~i~~~~-s~~~~~i~-~~~~~~~L~l~t~~~q~~l~~~~~~~lTP~~~~~~~~s~~-g~~~~~Pv~~g~~v~F~~~~g 288 (594) ||||+++. +++.+.|. +++++++|+|||+++||+|+++ ++|||+|++++++|.+ +++.++|+.+|++++|++++| T Consensus 387 dD~I~~~~~~~~~~~i~~~v~~~~~L~l~t~~~q~~l~~~--~~lTP~~~~~~~~s~~~~~~~~~Pv~vg~~v~f~~~~g 464 (794) T protein:vir:99 387 TDPIDVAVSTNRISILKYAVPFSEELILWSDQAQFVLSSD--GGLTPTTIRLDLTTEFEVTEQARPYGIGRGVYFVSPRA 464 (794) T ss_pred CccEEEEecCCcceeeEEEeecCCcEEEEecCcEEEEeCC--CcccceeEEEEEEEEeeccCCCCceEeCCeEEEEecCC Confidence 99999954 56667665 5677899999999999999985 4899999999999976 557899999999999999999 Q ss_pred CE---EEEEEeeecccceeecchhhhhhhhhcccccccCCceEEEEEeCCCCeEEEEEcCCCeEEEEEEe---cccceEe Q lcl|Aclame:pro 289 SK---VYAMNYVREQDNWIPDEMSSQAQHLFTPISSAKGASVRRVAYISDAAKSLWVVLENGQINYCCFD---RTTDTKA 362 (594) Q Consensus 289 ~~---v~e~~~~~~~d~~~~~dls~~a~hl~~~~~~~~~~~i~~~a~~~~p~~~~~~~~~dg~~~~~ty~---~eq~v~a 362 (594) ++ +|+|.|++++|+|+++|||++++||++ ++.+..++++++|+.++|++++||++++|+|+ +||+|+| T Consensus 465 ~~~~v~r~~~~~~~~d~y~a~Dlt~~~~hl~~------~~~~~~~a~~~~~~~~v~~~~~~g~l~~~~y~~~~~eq~v~a 538 (794) T protein:vir:99 465 KFSSVRRFYAVQDVTQVKNAEDISAHVPYYVE------NGVFKMSGSSTENFLTILTEGNEQRVYFYKFLYLQEQLVQQS 538 (794) T ss_pred CeeEEEEeeeeccccCceehhhHHHHHHHhcC------CCeEEEEEeCCCCcEEEEEEcCCCEEEEEEEeecCCceEEEe Confidence 64 456789999999999999999999985 34466779999999999999999999999997 5888999 Q ss_pred EEEeecCCCeEEEEEEEccCCCCEEEEEEEECCCCCcceeEEEEEeccCcc--------cccceeeeeeEEccC---c-- Q lcl|Aclame:pro 363 WTQLELSGGKVIDIAAAFNPDSDYAYVAVVRSKAINGVQKNYTVLEKISSP--------RTDWKRADGWVVAQV---N-- 429 (594) Q Consensus 363 W~~w~~~~g~v~~v~~~~~~~~d~~y~~v~r~~~~~g~~~~~~~le~~~~~--------~~~~~~~~~~~~~~~---~-- 429 (594) ||||++ +|.++.+|+++ .+|++|++|+|.. +.. +||++.. ..+..++|+...+.. . T Consensus 539 W~~~~~-~g~~~~~~~~~--~~d~l~~~v~r~~--~~~------ler~~~~~~~~~~~~~~~~~~lD~~~~~~~~~~~~~ 607 (794) T protein:vir:99 539 WSHWDF-GVNCRVLCCDM--IGAVMHLIIDSPS--GVL------MEKIEFTQNTKDYPDEPYRLYVDRKIEYTFPEGSYN 607 (794) T ss_pred EEEEEc-CCCeEEEEEEE--cCCEEEEEEEeCC--CEE------EEEEEeeeCCCCCCCcccceeeeeeeeeeecccccc Confidence 999999 67777777765 4799999999953 333 4444311 112234444333211 1 Q ss_pred --------ccccccCCcccCceeEEEEeCCeec----cCeEecCCceEEEEecCCCCCeEEEeEeeeeEEEecceeeeCC Q lcl|Aclame:pro 430 --------QNGDVLNLDRYIGRTAVIFSKYGLE----AEVEVNNIGLTHRINGYDPNTVYYVGYKMDSYFRTLTPSNGDM 497 (594) Q Consensus 430 --------~~~~~~~l~~l~g~tv~i~adg~~~----~~~~v~~~~~tl~~~~~~~~~~v~VG~~y~~~v~~~~~~~~~~ 497 (594) ....+.+++|++|+++.+++||... +...+.....+++++++.++++|+||++|+++++++||+++++ T Consensus 608 ~~~~~~~~~~~~~~g~~~l~g~~v~~~~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~vGl~y~s~~~~~~~~~~~~ 687 (794) T protein:vir:99 608 DDDFKTRVKLKDIYGSTPANGQYVFISLGGVTFTFDPPAGGWQANDGLIEFDGDLRGTKFFVGEAYTFLYEFSKFLIKTT 687 (794) T ss_pred cCcceeEEeccccccccccCCceEEEEeCCceeeeecccceEecCccEEEecCCCCCcEEEEeeeeeEEEeecceEEeec Confidence 1224688999999999999999763 3444566667788999999999999999999999999999977 Q ss_pred CCccce-----eeEEEEEEEEEEEcccceEEeeeecccccccccccccc---ccCCCccccccCcEEEEeecCCcCcceE Q lcl|Aclame:pro 498 KKSMFG-----SKIRISKVQLALFDSIEPTVNGEPADDRSTDDIMDARL---LDFSSNSGSSNGTRLVDYNPLGWENDGK 569 (594) Q Consensus 498 ~g~~~~-----~~~ri~~v~v~l~~S~g~~v~~~~~~~~~~~~~~~~~~---~~~~~~~~~~tg~~~v~~~~~g~~~~~~ 569 (594) ++..+. .|+||+|+++++.+|+++.+..+.............+. ....+.+++.+|++++++ .+|+++.+ T Consensus 688 ~~~g~~~~~~~gr~~l~r~~~~~~~tg~~~v~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~~tg~~~vp~--~g~~~~~~ 765 (794) T protein:vir:99 688 DTADGVATEDIGRLQLRRAWVNYDKSGNFRVEVNNQGRTFTYNMTGNRLSTNELILGDESLDTGQFRYAV--SGNATQVT 765 (794) T ss_pred CCCCceeeeccceEEEEEEEEEeecccceEEEECCCccceeeeccccccccccccccccccccceEEEEe--cccccceE Confidence 654433 37899999999999999988655433222111111221 233456788899888764 68999999 Q ss_pred EEEEECCCcCEEEEEEEEEEEeccC Q lcl|Aclame:pro 570 MVIAVEQPFLCEVVGVFSVVQSNKV 594 (594) Q Consensus 570 v~I~~~~P~P~tIlai~~~v~~n~~ 594 (594) |+|+|++|+||+||||++|..+|+- T Consensus 766 v~i~~d~P~P~tvlsi~~e~~y~~r 790 (794) T protein:vir:99 766 VSLISDTPNPLSIIGGGWEGYYVRR 790 (794) T ss_pred EEEEECCCCCEEEEEEEEEEEEecc Confidence 9999999999999999999999999 No 9 >protein:vir:94713 Length: 785 # NCBI annotation: tail tube # Family: family:all:825 # MgeID: mge:1528 # MgeName: K1F # Cross-refs: genbank:acc:YP_338122;genbank:gi:77118200;genbank:GeneID:3707736 Probab=100.00 E-value=2.4e-135 Score=758.66 Aligned_cols=557 Identities=12% Similarity=0.040 Sum_probs=442.1 Q ss_pred CCcc--cccccccceecchhcccchHHHHHHHHHhhcCcEEeecCCceecCcceeeeeeeCC-CCCEEEEEEEeCCCceE Q lcl|Aclame:pro 1 MADF--SQTSFKGGVIAPRLQFNEYESAYHHSIEDAVNFVVTEQGSLITRCGSEEVGLCQDG-EVRLFRLPAVDAPSNDV 77 (594) Q Consensus 1 m~~~--~~~~f~~Ge~sp~l~~r~d~~~y~~~~~~~~N~~~~~~G~~~~rpg~~~~~~~~~~-~~~~rlipF~~s~~q~y 77 (594) |+++ ..+||.+| +..|.|++||+++|++|+||++.|+||++||||++||++++.. .+..+++||.++++|+| T Consensus 1 M~~~~~s~~n~~~G-----vSqq~D~~ry~~q~~~~~N~~~~~~gG~~rRpG~~~v~~l~~~~~~~~~~~~f~~~~~~~y 75 (785) T protein:vir:94 1 MPLITQSIKNLKGG-----ISQQPDILRFSDQGEAQVNCWSSESDGLQKRPPTVFKRRLNIDVGSNPKFHLINRDEQEQY 75 (785) T ss_pred Ccceeeecchhhcc-----eecCCchHHhhhHHhhhhcceeeeccCcccCChhHhhhcccCCCCcCcEEEEEEeCCCceE Confidence 9998 68999999 5689999999999999999999999999999999999998754 46688899999999999 Q ss_pred EEEEeCCeEEEEeCCceEEecccccccccceeeccc--chhhhccceeEecCcEEEEecCCccceeEEeeccCc------ Q lcl|Aclame:pro 78 IVEVGNTNIAVWVNDVRQVVANTPSEWRNTIDRIQT--AYDTIGDDAGAANTGRLIMVHPALQPKRLYRDNNNA------ 149 (594) Q Consensus 78 ~le~g~~~~r~~~~~~~~~~~~~~~~~~~~~~~tpy--ta~~l~~i~~aq~adv~~~v~~~~~p~~L~R~~~~~------ 149 (594) +|||+++++|+|..+|..+...... || +.....+|+|+|++|++|++|++++|+.+.|.++.. T Consensus 76 ~l~~~~~~irv~~~~G~~~~v~~~~---------~y~~~~~~~~~l~~~q~aD~~fi~n~~~~~~~~~~~~~~~~~~~~~ 146 (785) T protein:vir:94 76 YIVFNGSNIQIVDLSGNQYSVSGSV---------DYVKSSNPRDDIRVVTVADYTFVVNRKVVVKGGSEKSHSGYNRKAR 146 (785) T ss_pred EEEEcCCeEEEEecCCcEEEEecCC---------CceeecCchhheeeEeeCCEEEEEcCCcceeeeeccCCcCCCCCCc Confidence 9999999999999877655433222 33 122345689999999999999999998776533211 Q ss_pred ------------------------------------------------------------eee----------------- Q lcl|Aclame:pro 150 ------------------------------------------------------------WQF----------------- 152 (594) Q Consensus 150 ------------------------------------------------------------w~~----------------- 152 (594) |++ T Consensus 147 ~~~~i~~g~y~~~y~i~i~g~~~at~~t~~~s~a~~s~~~~s~~~i~~~l~~~l~a~~t~~t~~~~g~~i~i~a~s~t~~ 226 (785) T protein:vir:94 147 ALINLRGGQYGRTLKVGINGGVKVSHKLPAGNDAENDPPKVDAQAIGAALRDLLVTAYPTFTFDLGSGFLLITAPSGTDI 226 (785) T ss_pred eEEEecccccceeEEEeeCCcceeEEEEccCccccccccccchHHHHHHHHHHhhccccceeEEecCcEEEEEecCCccc Confidence 110 Q ss_pred -------------------------------------------------------------------------------- Q lcl|Aclame:pro 153 -------------------------------------------------------------------------------- 152 (594) Q Consensus 153 -------------------------------------------------------------------------------- 152 (594) T Consensus 227 ~~~s~~~~~~~t~~~~~~~~~~~~~~Lp~~~~~G~~v~v~~~~~~~~~~y~v~~~~~~g~w~e~~~~g~~~~~~~~tmp~ 306 (785) T protein:vir:94 227 NSVETEDGYANQLISPVLDTVQTISKLPLAAPNGYIIKIQGETNSSADEYYVMYDSNTKTWKETVEPGVVTGFDNTTMPH 306 (785) T ss_pred cceeeecccCCeEEEEEEeeccceeccccccCCCCEEEEEccCCCCccceEEEEEcCCceEEEecccceeeeeeccccce Confidence Q ss_pred ------------cccccceeeeccc-cCC-------cceEEEEEeceEEEEeCCCCCcEEEEEeccccccccccccC--C Q lcl|Aclame:pro 153 ------------VNMHTGAVPAEWS-PSN-------YPQTVGIFQNRVWYVGSPVHRTYFWATRAGKLEDIAPSTAN--N 210 (594) Q Consensus 153 ------------~~~~~~~~p~~~~-~~g-------~Ps~v~f~~~RL~~~~~~~~p~~v~~S~~gd~~nF~~~t~~--~ 210 (594) ...+|..+...++ +++ ||++|+||||||+|++ |++|||||+||||||+++++. . T Consensus 307 ~l~~~~~~~~~~~~~~w~~r~~Gd~~tnp~psf~g~~~~~v~f~q~RL~f~~----~~~v~~Srtgd~~nF~~~t~~~~~ 382 (785) T protein:vir:94 307 ALVRQSDGSFEFKALDWSKRGAGNDDTNPMPSFVDATINDVFFYRNRLGFLS----GENVIMSRSASYFAFFPKSVATLS 382 (785) T ss_pred EEEeccCCceEEeccccccccCCCcccCCcceecccccceEEEEeceEEEec----CCeEEEEccCCcccCccccccCCC Confidence 0000000000000 122 4567899999999998 578999999999999999854 5 Q ss_pred CCccEEEEE-cCCccEEE-EEEcCCCEEEEecCcEEEEecCCCcccCcceeEEEeeeec-ccCCcccEEeCCeEEEEEcC Q lcl|Aclame:pro 211 PNDPISFVG-IMEGTPCW-IIASSDVLTIGTTINDYQLAASTGVSVTAATAILRRSSVQ-GTAAVQGIPAEEQVIFCSRN 287 (594) Q Consensus 211 d~d~i~~~~-s~~~~~i~-~~~~~~~L~l~t~~~q~~l~~~~~~~lTP~~~~~~~~s~~-g~~~~~Pv~~g~~v~F~~~~ 287 (594) |||||+++. +++.+.|. +++++++|+|||+++||+|+++ ++|||+|++++++|.+ +++.++|+.+|++++|++++ T Consensus 383 DdD~i~~~~~~~~~~~i~~~v~~~~~L~l~T~~~e~~l~~~--~~lTP~~~~~~~~s~~~~~~~~~Pv~vg~~v~f~~~~ 460 (785) T protein:vir:94 383 DDDPIDVAVSHPRISILKYAVPFSEQLLLWSDEVQFVMTSS--GVLTSKSIQLDVGSEFALGDNARPFAVGRSVFFSAPR 460 (785) T ss_pred CCccEEEEecCCcceeeEEEeecCCcEEEEecCcEEEEcCC--CcccceeEEEEEEEeeeccCCCCceEeCCeEEEEecC Confidence 999999955 55566665 5678899999999999999874 4899999999999976 55789999999999999999 Q ss_pred CCE--E-EEEEeeecccceeecchhhhhhhhhcccccccCCceEEEEEeCCCCeEEEEEcCCCeEEEEEEe---cccceE Q lcl|Aclame:pro 288 KSK--V-YAMNYVREQDNWIPDEMSSQAQHLFTPISSAKGASVRRVAYISDAAKSLWVVLENGQINYCCFD---RTTDTK 361 (594) Q Consensus 288 g~~--v-~e~~~~~~~d~~~~~dls~~a~hl~~~~~~~~~~~i~~~a~~~~p~~~~~~~~~dg~~~~~ty~---~eq~v~ 361 (594) |++ + |++.|++.+|+|+++|+|.|++|++. ++.+..++++++|+.++|++++||++++|+|+ +||+|+ T Consensus 461 g~~~~v~r~~~~~~~~d~y~~~dlt~~~~~~~~------g~~~~~~a~~~~~~~~~~~~~~~g~l~~~~y~~~~~e~~v~ 534 (785) T protein:vir:94 461 GSFTSIKRYFAVADVSDVKDADDTTGHVLSYIP------NGVFDIQGTGTENYICVNSTGAYNRIYIYKFLFKDSVQLQA 534 (785) T ss_pred CCeeEEEeeeeecccccceehhhHHHHHHHhcC------CCcEEEEEecCCCcEEEEEEcCCCEEEEEEEeecCCceEEE Confidence 975 3 55577888999999999999999985 45577889999999999999999999999996 899999 Q ss_pred eEEEeecCC-CeEEEEEEEccCCCCEEEEEEEECCCCCcceeEEEEEeccCccc-----ccceeeeeeEEcc---Cc--- Q lcl|Aclame:pro 362 AWTQLELSG-GKVIDIAAAFNPDSDYAYVAVVRSKAINGVQKNYTVLEKISSPR-----TDWKRADGWVVAQ---VN--- 429 (594) Q Consensus 362 aW~~w~~~~-g~v~~v~~~~~~~~d~~y~~v~r~~~~~g~~~~~~~le~~~~~~-----~~~~~~~~~~~~~---~~--- 429 (594) |||||++++ +.+++++++ +|++|++++|. +|...++ +|++.... .+..++||...+. .. T Consensus 535 aW~r~~~~~~~~~~~~~~~----~d~~~~vv~r~---~g~~~~~--ie~~~~~~d~~~~~~~~~lD~~~~~~~~~~~~~~ 605 (785) T protein:vir:94 535 SWSHWEFPKDDKILASASI----GSTMFIVRQHQ---GGVDIEH--LKFIKEATDFPSEPYRLHVDSKVSMVIPIGSFNA 605 (785) T ss_pred EEEEEEeCCCeEEEEEEEe----CCEEEEEEEcC---CCEEEEE--EEeecccCCCCCcceeEEeeeeeEEEecCcceec Confidence 999999954 367777765 68999999983 5777665 45443222 1223455443321 11 Q ss_pred --------ccccccCCcccCceeEEEEeCCeeccCeEecCCceEEEEecCCCCCeEEEeEeeeeEEEecceeeeCCCCcc Q lcl|Aclame:pro 430 --------QNGDVLNLDRYIGRTAVIFSKYGLEAEVEVNNIGLTHRINGYDPNTVYYVGYKMDSYFRTLTPSNGDMKKSM 501 (594) Q Consensus 430 --------~~~~~~~l~~l~g~tv~i~adg~~~~~~~v~~~~~tl~~~~~~~~~~v~VG~~y~~~v~~~~~~~~~~~g~~ 501 (594) ......++.|++|+++.+++||..++...|..+..+++++++.++++|+||++|+++++|+||++++++|.. T Consensus 606 ~~~~t~~~~~~~~~g~~~leg~~v~v~adG~~~~~~~v~~~~~tl~~~g~~~~~~v~vGl~y~~~~~~~~~~~~~~~~~~ 685 (785) T protein:vir:94 606 DTYKTTVDIGAAYGGNAPSPGRYYLIDSQGAYLDLGELTSISTVITLNGDWSGRTVFIGRSYLMSYKFSRFLIKIEDDSG 685 (785) T ss_pred cccccccccccccccCCccCCeEEEEeeCCcCccCceEcCCCcEEEecCCCCCceEEEeeeeeEEEeecceeEEecCCCc Confidence 111245889999999999999999999999999999999999999999999999999999999999888755 Q ss_pred ce----eeEEEEEEEEEEEcccceEEeeeeccccccccccccccc-cCCCccccccCcEEEEeecCCcCcceEEEEEECC Q lcl|Aclame:pro 502 FG----SKIRISKVQLALFDSIEPTVNGEPADDRSTDDIMDARLL-DFSSNSGSSNGTRLVDYNPLGWENDGKMVIAVEQ 576 (594) Q Consensus 502 ~~----~~~ri~~v~v~l~~S~g~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~tg~~~v~~~~~g~~~~~~v~I~~~~ 576 (594) +. .|+||+|+++++.+|+++.++.+....+........+.+ ...+.+++.+|++++++ .+|+++.+|+|+|++ T Consensus 686 ~~~~~~gr~~l~r~~~~~~~sg~~~v~v~~~~~~~~~~~~~~~~g~~~~~~~~~~tg~~~vp~--~g~~~~~~v~i~~~~ 763 (785) T protein:vir:94 686 TQSEDTGRLQLRRAWVNYRDTGALRLIVRNGEREFVNTFNGYTLGQQTIGTTNIGDGQYRFAM--NGNALTTSLTLESDY 763 (785) T ss_pred ccccccccEEEEEEEEEeecccceEEEecCCCccceeeecCcccCcccccccccccceEEEEe--ecccceEEEEEEECC Confidence 43 268999999999999999998654433322222223332 22355778999888775 589999999999999 Q ss_pred CcCEEEEEEEEEEEeccC Q lcl|Aclame:pro 577 PFLCEVVGVFSVVQSNKV 594 (594) Q Consensus 577 P~P~tIlai~~~v~~n~~ 594 (594) |+||+||||++|..+|+- T Consensus 764 P~P~tvlsi~~eg~y~~r 781 (785) T protein:vir:94 764 PTPVSIVGCGWEASYAKK 781 (785) T ss_pred CCceEEEEEEEEEEEecc Confidence 999999999999999999 No 10 >protein:vir:94583 Length: 792 # NCBI annotation: Tubular tail protein B # Family: family:all:825 # MgeID: mge:1516 # MgeName: Berlin # Cross-refs: genbank:acc:YP_919014;genbank:gi:119637778;genbank:GeneID:5179343 Probab=100.00 E-value=1.6e-135 Score=759.60 Aligned_cols=559 Identities=13% Similarity=0.048 Sum_probs=438.1 Q ss_pred CCcc--cccccccceecchhcccchHHHHHHHHHhhcCcEEeecCCceecCcceeeeeeeCC---CCCEEEEEEEeCCCc Q lcl|Aclame:pro 1 MADF--SQTSFKGGVIAPRLQFNEYESAYHHSIEDAVNFVVTEQGSLITRCGSEEVGLCQDG---EVRLFRLPAVDAPSN 75 (594) Q Consensus 1 m~~~--~~~~f~~Ge~sp~l~~r~d~~~y~~~~~~~~N~~~~~~G~~~~rpg~~~~~~~~~~---~~~~rlipF~~s~~q 75 (594) |+.| +.+||.+| +..|.|++||.++|++|+||++.|+||++|||||+||+.+++. ++++||+||+|+++| T Consensus 1 M~~i~~s~~n~~~G-----iSqq~D~~ry~~q~~~~~N~~~~~~gG~~rRpG~~fv~~l~~~~~~~~~~~l~~~~~~~~q 75 (792) T protein:vir:94 1 MALISQSVKNLKGG-----ISQQPNILRFPEQGSEQINGWSSETEGLQKRPPFVFTKTIGDQNALGAKPLVHLINRDSAE 75 (792) T ss_pred Ccceeeecchhhcc-----eecCcchHHhhhhhhhhhcceeeeccccccCChhHHHHhhhcCCCCCcccEEEEEEeCCCc Confidence 9998 68999999 5578999999999999999999999999999999999988765 567899999999999 Q ss_pred eEEEEEeCCeEEEEeCCceEEecccccccccceeecccchhh--hccceeEecCcEEEEecCCccceeEEeeccCce--- Q lcl|Aclame:pro 76 DVIVEVGNTNIAVWVNDVRQVVANTPSEWRNTIDRIQTAYDT--IGDDAGAANTGRLIMVHPALQPKRLYRDNNNAW--- 150 (594) Q Consensus 76 ~y~le~g~~~~r~~~~~~~~~~~~~~~~~~~~~~~tpyta~~--l~~i~~aq~adv~~~v~~~~~p~~L~R~~~~~w--- 150 (594) +|+|||+++++|+|..++........ .||..+. ..+|+++|++|++|++|++++|+++.|.++..| T Consensus 76 ~y~l~f~~~~~rv~~~~g~~~~~~~~---------~~y~~~~~~~~~l~~~q~aD~~fi~n~~~~~~~~~~~~~~~~~~~ 146 (792) T protein:vir:94 76 QYYVVFTGQGVRVFDLNGKEYDVKGD---------LSYVKVENPRDDLRMVTVADYTFIVNRNMVVRPDTTPLYTLKENG 146 (792) T ss_pred eEEEEEcCCeEEEEecCCceEEeccc---------CceeeecCCcceeEEEEEcCEEEEEeCCccceeEecCcCCCCCCc Confidence 99999999999999866654432221 2443332 245788888888888888888877766443221 Q ss_pred -------------------------------------------------------------------------------- Q lcl|Aclame:pro 151 -------------------------------------------------------------------------------- 150 (594) Q Consensus 151 -------------------------------------------------------------------------------- 150 (594) T Consensus 147 ~~~v~i~~g~y~~~y~i~i~~~~~~~~~~~~t~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 226 (792) T protein:vir:94 147 DCLINIRGGMYGRTLAFTINNTKIAYEIAHGDAPEHSKQTDAQWLVKKLAGLARLNVAFKGWTFTEGPGYIHVIAPSNSQ 226 (792) T ss_pred eEEEEccCCCcceeEEEEecCceeeeeeecCcccceecccchhhhhhhhhhhccccccccccEEEECCeEEEEEecCCce Confidence Q ss_pred -------------------------------------------------------------------------------- Q lcl|Aclame:pro 151 -------------------------------------------------------------------------------- 150 (594) Q Consensus 151 -------------------------------------------------------------------------------- 150 (594) T Consensus 227 ~~~~~~~~g~~~~~~~~~~~~v~~~~~lp~~~~~G~~v~i~~~~~~~~d~y~v~~~~~~~~w~E~~~~~~~~~~~~~tmp 306 (792) T protein:vir:94 227 INSLSTEDGYADQLMNAVMHTSQSFSRLPVEAPNGYTVKIVGDTSKTSDMFYVQYDNMKKVWKEVAGWGVQKGLNGGTMP 306 (792) T ss_pred eeeeecccCcCcceeeeeeecccccccccccCCCCcEEEEEccCCCCccceEEEEEcCCceEEEecccceeeeecccccC Confidence Q ss_pred -----------eecccccceeeeccc-cCCcceE-------EEEEeceEEEEeCCCCCcEEEEEeccccccccccccC-- Q lcl|Aclame:pro 151 -----------QFVNMHTGAVPAEWS-PSNYPQT-------VGIFQNRVWYVGSPVHRTYFWATRAGKLEDIAPSTAN-- 209 (594) Q Consensus 151 -----------~~~~~~~~~~p~~~~-~~g~Ps~-------v~f~~~RL~~~~~~~~p~~v~~S~~gd~~nF~~~t~~-- 209 (594) ++...+|..+..+++ .+++|++ |+||||||+|++ ||+|||||+||||||++++++ T Consensus 307 ~~lv~~~~~~~~~~~~~w~~r~~gd~~tnp~psf~g~~i~~v~f~q~RL~f~~----~~~v~~Srtgd~~nF~~~t~~~~ 382 (792) T protein:vir:94 307 HALVRQADGSFQMQVLPWTQRTCGDMDTNPTPSIVDQKINDVFFFRNRLGFLA----GENIVMSRTSKYFSLFPASVANL 382 (792) T ss_pred eeEEEcCCCcEEEEeccccccccCccccCccceeccCCcceEEEEcceEEEec----CCeEEEEccCCcccCccccccCC Confidence 111111111111111 2345654 899999999998 578999999999999999864 Q ss_pred CCCccEEEEE-cCCccEEE-EEEcCCCEEEEecCcEEEEecCCCcccCcceeEEEeeeecc-cCCcccEEeCCeEEEEEc Q lcl|Aclame:pro 210 NPNDPISFVG-IMEGTPCW-IIASSDVLTIGTTINDYQLAASTGVSVTAATAILRRSSVQG-TAAVQGIPAEEQVIFCSR 286 (594) Q Consensus 210 ~d~d~i~~~~-s~~~~~i~-~~~~~~~L~l~t~~~q~~l~~~~~~~lTP~~~~~~~~s~~g-~~~~~Pv~~g~~v~F~~~ 286 (594) .|||||++++ +++.+.|. +++++++|+|||+++||+|+++ ++|||+|++++++|.++ ++.++|+.+|++++|+++ T Consensus 383 ~DdD~I~~~~ss~~~~~i~~~v~~~~~L~l~T~~~q~~l~~~--~~lTP~~~~i~~~s~~~~~~~~~Pv~vG~~v~Fv~~ 460 (792) T protein:vir:94 383 SDDDPIDVAVSHNRISILKYAVPFSEELLLWSDQAQFVLSAQ--GILSPKSVELNLTTEFDVSDRARPFGVGRGVYFASP 460 (792) T ss_pred CCCccEEEEecCCcceeeeEEeecCCcEEEEecCcEEEEeCC--CcccceeEEEEEEEEeeccCCCCceEeCCeEEEeec Confidence 5999999955 56666665 5777899999999999999885 48999999999999875 568999999999999999 Q ss_pred CCCE--E-EEEEeeecccceeecchhhhhhhhhcccccccCCceEEEEEeCCCCeEEEEEcCCCeEEEEEEe---cccce Q lcl|Aclame:pro 287 NKSK--V-YAMNYVREQDNWIPDEMSSQAQHLFTPISSAKGASVRRVAYISDAAKSLWVVLENGQINYCCFD---RTTDT 360 (594) Q Consensus 287 ~g~~--v-~e~~~~~~~d~~~~~dls~~a~hl~~~~~~~~~~~i~~~a~~~~p~~~~~~~~~dg~~~~~ty~---~eq~v 360 (594) +|++ + |++.|++.+|+|+++|+|+|++||++ ++-+..++++++|+.++|++++||++++|+|+ +||+| T Consensus 461 ~g~~~~v~r~~~~~~~~d~y~a~DlT~~~~hl~~------~~v~~~~a~~~~~~~vv~~~~~~g~l~~~ty~~~~~e~~v 534 (792) T protein:vir:94 461 RASYTSLNRYYAVQDVSSVKSAEDMSAHVPNYIP------NGVFSIRGSSTENFISVLSSNAPSRIFLYKFLYLNEEIAQ 534 (792) T ss_pred CCCeeEEEeeeeeccccCceehhhHHHHHHHhcC------CceEEEEEeCCCCcEEEEEEcCCCeEEEEEEeecCCceEE Confidence 9964 4 45778888999999999999999984 33345668889999999999999999999996 88999 Q ss_pred EeEEEeecCCCeEEEEEEEccCCCCEEEEEEEECCCCCcceeEEEEEeccCc----ccccceeeeeeEEcc---Ccc--- Q lcl|Aclame:pro 361 KAWTQLELSGGKVIDIAAAFNPDSDYAYVAVVRSKAINGVQKNYTVLEKISS----PRTDWKRADGWVVAQ---VNQ--- 430 (594) Q Consensus 361 ~aW~~w~~~~g~v~~v~~~~~~~~d~~y~~v~r~~~~~g~~~~~~~le~~~~----~~~~~~~~~~~~~~~---~~~--- 430 (594) +|||||++ +|.++++|+ +..+|++|++|+|. +++...|+. +.++. ...+..+.|+...+. ..+ T Consensus 535 ~aW~~~~~-~g~~~~~~~--~~~~D~l~~~v~r~--~~~~~~r~~--~~~~~~d~~~~~~~~~lD~~~~~~~~~~~~~~~ 607 (792) T protein:vir:94 535 QSWSHWEL-GSNVTVLAC--DSIGSTMYLVLRNQ--SHTWMCRAH--FTKNSIDFPDEPYRLYIDNKVKYVIPEGSYNDD 607 (792) T ss_pred EeEEEEEc-CCcEEEEEE--eecCCEEEEEEEeC--CCEEEEEEE--EeecccccCCCcceeeeeeeeeEEecCcceecC Confidence 99999999 677777765 34479999999995 566666653 22222 112233444433221 111 Q ss_pred -------cccccCCcccCceeEEEEeCCee----ccCeEecCCceEEEEecCCCCCeEEEeEeeeeEEEecceeeeCCCC Q lcl|Aclame:pro 431 -------NGDVLNLDRYIGRTAVIFSKYGL----EAEVEVNNIGLTHRINGYDPNTVYYVGYKMDSYFRTLTPSNGDMKK 499 (594) Q Consensus 431 -------~~~~~~l~~l~g~tv~i~adg~~----~~~~~v~~~~~tl~~~~~~~~~~v~VG~~y~~~v~~~~~~~~~~~g 499 (594) ..++.+++|++|+++.+.+||.. .+...++.++.+++++++.++++|+||++|+++++++||+++.+.| T Consensus 608 ~~~T~~~~~~~~gl~~l~G~~v~v~~dG~~~~~~~~~~~~~~~~~~i~~~g~~~a~~v~VGl~y~~~~~~~~~~~~~~~g 687 (792) T protein:vir:94 608 TYATTVKPVDVYGMKYWTGKFYIVASDGLVSWFEPPRGGWPNGVPMLTMSGNREGETIYVGLAISFRYVFSKFLIKKTAD 687 (792) T ss_pred ceeeeeccccccCcccccCcEEEEEecCceeEeecccceecCCccEEEecCCccCCeEEEeeeeeEEEEeccceeeccCC Confidence 22457999999999999999964 3455666777788899999999999999999999999999998877 Q ss_pred cccee-----eEEEEEEEEEEEcccceEEeeeecccccccccccccc---ccCCCccccccCcEEEEeecCCcCcceEEE Q lcl|Aclame:pro 500 SMFGS-----KIRISKVQLALFDSIEPTVNGEPADDRSTDDIMDARL---LDFSSNSGSSNGTRLVDYNPLGWENDGKMV 571 (594) Q Consensus 500 ~~~~~-----~~ri~~v~v~l~~S~g~~v~~~~~~~~~~~~~~~~~~---~~~~~~~~~~tg~~~v~~~~~g~~~~~~v~ 571 (594) ....+ |+||+|+++++.+|+.+.++.+........+....+. ....+.+++.+|++++++ .+|+++.+|+ T Consensus 688 ~~~~~~~~~gr~rl~r~~~~~~~tg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~tg~~~vp~--~g~~~~~~v~ 765 (792) T protein:vir:94 688 DGSIATEDIGRLQLRRAWVNYEDSGAFTVEVENTSRLFSYDMAGARLGSNVLRAGGLNVGTGQFRFPV--TGNAQLNEVR 765 (792) T ss_pred CcCccccceeeEEEEEEEEeeeccceeEEEEcCCCcceeeeeccceeccccccccccccccceEEEEe--eccCceEEEE Confidence 55432 7899999999999999999876554443333323232 234577778888888775 5899999999 Q ss_pred EEECCCcCEEEEEEEEEEEeccC Q lcl|Aclame:pro 572 IAVEQPFLCEVVGVFSVVQSNKV 594 (594) Q Consensus 572 I~~~~P~P~tIlai~~~v~~n~~ 594 (594) |+|++|+||+||||++|..+|+- T Consensus 766 i~~d~P~P~tvlai~~eg~y~~r 788 (792) T protein:vir:94 766 IISEHTTPLNVIGCGWEGNYLRR 788 (792) T ss_pred EEECCCCCEEEEEEEEEEEEecc Confidence 99999999999999999999999 No 11 >protein:vir:80253 Length: 777 # NCBI annotation: putative tail tubular protein B # Family: family:all:825 # MgeID: mge:1879 # MgeName: LKA1 # Cross-refs: genbank:acc:YP_001522886;genbank:gi:158345179;genbank:GeneID:5687516 Probab=100.00 E-value=2.1e-134 Score=753.42 Aligned_cols=552 Identities=11% Similarity=0.061 Sum_probs=434.5 Q ss_pred CCcc--cccccccceecchhcccchHHHHHHHHHhhcCcEEeecCCceecCcceeeeeeeCC---CCCEEEEEEEeCCCc Q lcl|Aclame:pro 1 MADF--SQTSFKGGVIAPRLQFNEYESAYHHSIEDAVNFVVTEQGSLITRCGSEEVGLCQDG---EVRLFRLPAVDAPSN 75 (594) Q Consensus 1 m~~~--~~~~f~~Ge~sp~l~~r~d~~~y~~~~~~~~N~~~~~~G~~~~rpg~~~~~~~~~~---~~~~rlipF~~s~~q 75 (594) |+++ +++||++| +..|.|++||.++|++|+||++.|+||++|||||+||++++++ ....++|||.|+++| T Consensus 1 M~~i~~~~~nf~~G-----vS~q~D~~ry~~q~~~~~N~~~~~~gG~~rRpGt~fv~~l~~~~~~~~~~~~~~~~~~~e~ 75 (777) T protein:vir:80 1 MSYFAGSYRQLLFG-----VSQQTAKDRLEGQVESQLNMQSDLVTGPRRRSPVHLIADAMAATDANRLAYSLATFSGREV 75 (777) T ss_pred Cceeeeecchhhcc-----cccCCchHHhhhHHhhhhcceeeeccCceeCcchHhhhhhcCCCcccceeEEEEecCCCee Confidence 9997 79999999 6689999999999999999999999999999999999998854 467788999999999 Q ss_pred eEEEEEeCCeEEEEeCCceEEecccccccccceeeccc-chhhhccceeEecCcEEEEecCCccceeEEeeccCc-ee-- Q lcl|Aclame:pro 76 DVIVEVGNTNIAVWVNDVRQVVANTPSEWRNTIDRIQT-AYDTIGDDAGAANTGRLIMVHPALQPKRLYRDNNNA-WQ-- 151 (594) Q Consensus 76 ~y~le~g~~~~r~~~~~~~~~~~~~~~~~~~~~~~tpy-ta~~l~~i~~aq~adv~~~v~~~~~p~~L~R~~~~~-w~-- 151 (594) +|+||++++++|+|...+..+..... +|| ++....+|+|+|++|++|++|++++|+++.+.+++. |. T Consensus 76 ~~~l~~g~g~irv~~~~~g~~~~~~~---------~~Yl~a~~~~~l~~~q~aD~~fi~n~~~~p~~~~~~~~~~~~~~~ 146 (777) T protein:vir:80 76 LLLVDTLDGTLTILDDATGEVLFTGT---------NSYLTAGTGRSIRFAALDDSVFVANTEVIPQTQLWSGASAYPDPT 146 (777) T ss_pred EEEEEecCCeEEEEECCCCeEEEecC---------CCceeeccccceeEEEEcCEEEEEeCCccceeeecccCCCccCcc Confidence 99999999999999775544332221 355 455567899999999999999999998765443211 00 Q ss_pred ---------------------------------------------------------------------ec--------- Q lcl|Aclame:pro 152 ---------------------------------------------------------------------FV--------- 153 (594) Q Consensus 152 ---------------------------------------------------------------------~~--------- 153 (594) +. T Consensus 147 ~~~~~~v~~~~~g~~y~i~i~~~~~~~~~t~~~~t~~~~~~~~~~~~ia~~L~~~~~~~~~~~s~~~~~~~~~g~~~~i~ 226 (777) T protein:vir:80 147 RAGYLYVVAGAFSKQYRLSITNQVTGVTTSVDVTTSATEASQATGEYVITQLRTAAEADATIGTAAGFAYYQDGAYLYVT 226 (777) T ss_pred cceEEEeeccCCCceeeEeecCCcCceeEEEecCCcccccccccchhhhhhhhhhhccccceeecCceEEEeCCcEEEEE Confidence 00 Q ss_pred -------------------------------------------------------------------------------- Q lcl|Aclame:pro 154 -------------------------------------------------------------------------------- 153 (594) Q Consensus 154 -------------------------------------------------------------------------------- 153 (594) T Consensus 227 ~~~~~~~t~~~g~~~~~~~~~~~v~~~~~lp~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~w~e~~~~~~~~~~~t~p~ 306 (777) T protein:vir:80 227 APEAIAVSTDSGSNFLRASNAASIRDAAELPAKLPADADGFIIATGAAKNKTYFRWVDLERKWDEDASRGAQAELIDMPL 306 (777) T ss_pred ecCceeEecCCcCccceeeeeEEEeeccccccccccccceEEEeCCCCCCceEEEEEccCcEEEEeecccccccccccce Confidence Q ss_pred ------------ccccceeeecc-ccCCcce-------EEEEEeceEEEEeCCCCCcEEEEEecccccccccccc--CCC Q lcl|Aclame:pro 154 ------------NMHTGAVPAEW-SPSNYPQ-------TVGIFQNRVWYVGSPVHRTYFWATRAGKLEDIAPSTA--NNP 211 (594) Q Consensus 154 ------------~~~~~~~p~~~-~~~g~Ps-------~v~f~~~RL~~~~~~~~p~~v~~S~~gd~~nF~~~t~--~~d 211 (594) ...|..+..++ .+++||+ +|+||||||+|++ ||+|||||+|||+||+++++ +.| T Consensus 307 ~l~~~~~~~~~~~~~w~~r~~gd~~tn~~Psf~g~~i~~v~f~q~RL~f~~----~~~v~~Srtgd~~nF~~~s~~~~~D 382 (777) T protein:vir:80 307 RITYSAPNFSLTALNYERRASGDATSNPALKFTEQGISGMTTMQGRLVLLA----GEYVCMSASGNPLRWFRASVSTQSD 382 (777) T ss_pred EEEecCCceEeeccCCccccccccccCCCceecCCceeEEEEEcceeeeec----CCeEEEEeccCccccccccccCCCC Confidence 00000000111 1356786 4799999999998 56899999999999999985 469 Q ss_pred CccEEEEE-cCCccEEE-EEEcCCCEEEEecCcEEEEecCCCcccCcceeEEEeeeec-ccCCcccEEeCCeEEEEEcC- Q lcl|Aclame:pro 212 NDPISFVG-IMEGTPCW-IIASSDVLTIGTTINDYQLAASTGVSVTAATAILRRSSVQ-GTAAVQGIPAEEQVIFCSRN- 287 (594) Q Consensus 212 ~d~i~~~~-s~~~~~i~-~~~~~~~L~l~t~~~q~~l~~~~~~~lTP~~~~~~~~s~~-g~~~~~Pv~~g~~v~F~~~~- 287 (594) ||||+++. +++.+.|. +++++++|+|||+++||+|+++ ++|||+|+.++++|.+ +++.++|+.+|++++|++++ T Consensus 383 dDpI~~~~ss~~~~~i~~~v~~~~~L~i~T~~~e~~l~~~--~~lTP~~~~~~~~s~~~~~~~~~Pv~vG~~v~Fv~~r~ 460 (777) T protein:vir:80 383 DDPIEVAATAPVASPYEYAVAFNKDLVLFAKTHQGLVPGA--NLLTSRNATAAVVTEYSFQNSCSPVVAGRTVFFASPRS 460 (777) T ss_pred CccEEEEEcCCcceeeeeeeecCCcEEEEecCceEEEeCC--CcccceeEEEEEEEeeccCCCCCceEeCCeEEEEecCC Confidence 99999955 56666665 5677899999999999999874 4899999999999976 55789999999999999754 Q ss_pred CC--EEEEEEee-ecccceeecchhhhhhhhhcccccccCCceEEEEEeCCCCeEEEEEcCCCeEEEEEEe---cccceE Q lcl|Aclame:pro 288 KS--KVYAMNYV-REQDNWIPDEMSSQAQHLFTPISSAKGASVRRVAYISDAAKSLWVVLENGQINYCCFD---RTTDTK 361 (594) Q Consensus 288 g~--~v~e~~~~-~~~d~~~~~dls~~a~hl~~~~~~~~~~~i~~~a~~~~p~~~~~~~~~dg~~~~~ty~---~eq~v~ 361 (594) |+ +|+||.|+ +++|+|+++|+|+|++||+. ++|.+|++|++|++++|++++||++++|+|+ +||+|+ T Consensus 461 g~~s~v~e~~~~~~~~d~y~a~Dlt~~~~hl~~-------~~v~~~a~s~~p~~v~~~~~~dg~l~~~ty~~~~~e~~v~ 533 (777) T protein:vir:80 461 GPWSAVWEMLPSQYTDAQVEASDSTSHLPKYIA-------GPVRFLATSSTTSIVVVGTSNLRELVVHEYLWQGGEKVHA 533 (777) T ss_pred CceeEEeeeeecccccCceehhHHHHHHHHhcC-------CceEEEEEcCCCceEEEEEcCCCeEEEEEEeecCCceEEE Confidence 54 79999998 67899999999999999974 6799999999999999999999999999996 889999 Q ss_pred eEEEeecCCCeEEEEEEEccCCCCEEEEEEEECCCCCcceeEEEEEeccCcccc------cceeeeeeEEccCcc----c Q lcl|Aclame:pro 362 AWTQLELSGGKVIDIAAAFNPDSDYAYVAVVRSKAINGVQKNYTVLEKISSPRT------DWKRADGWVVAQVNQ----N 431 (594) Q Consensus 362 aW~~w~~~~g~v~~v~~~~~~~~d~~y~~v~r~~~~~g~~~~~~~le~~~~~~~------~~~~~~~~~~~~~~~----~ 431 (594) |||||++ +|.|++||++ +|++|++|+|.. + .++|+|+.... ...+.|++......+ . T Consensus 534 aW~r~~~-~g~v~~v~~i----~d~l~~iv~r~~------~--~~le~~~~~~~~d~~~~~~~~~D~~~~~~~~~~~~~~ 600 (777) T protein:vir:80 534 AWHKWSF-PQDITGAYFR----GDRLILLFHVAG------R--VILGELFMQRLGDAQSIPGGFLDLYRVGAANADEEVA 600 (777) T ss_pred eeEEecc-CCcEEEEEEE----CCEEEEEEEcCC------e--EEEEEEeeccCCCCcccceeeeeeeeeeeeeeCCccc Confidence 9999999 7999999997 799999999942 2 35788864433 234555544333333 2 Q ss_pred ccccCCcccCceeEEEEe-CCe------eccCeEecCCceEEEEecCCCCCeEEEeEeeeeEEEecceeeeCCCCcccee Q lcl|Aclame:pro 432 GDVLNLDRYIGRTAVIFS-KYG------LEAEVEVNNIGLTHRINGYDPNTVYYVGYKMDSYFRTLTPSNGDMKKSMFGS 504 (594) Q Consensus 432 ~~~~~l~~l~g~tv~i~a-dg~------~~~~~~v~~~~~tl~~~~~~~~~~v~VG~~y~~~v~~~~~~~~~~~g~~~~~ 504 (594) .+..+++++.+.....+. +|. ..+...+.+....+.+.++.++++|+||++|+++++|+||++++++|+.+++ T Consensus 601 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~v~~~~~~~~v~VGl~y~s~~~~~~~~~~~~~g~~~~~ 680 (777) T protein:vir:80 601 IPAFAADLYPEDSTFAYKLSGEFQSLGQRCGDRRVDGATVYIKVVGAQAGDQYRIGLRYLSKLGPTRPILRDPNGVPITT 680 (777) T ss_pred eeEeeccccCCcceeEEEecCcccccceeeeeEEeCCceeeEEEcCCCCCCEEEEeeeeEEEEEeCceEEeCCCCceeee Confidence 345667776665544443 332 1233444555556788899999999999999999999999999999999986 Q ss_pred -eEEEEEEEEEEEcccceEEeeeecccc-ccccccccccc---cCCCccccccCcEEEEeecCCcCcceEEEEEECCCcC Q lcl|Aclame:pro 505 -KIRISKVQLALFDSIEPTVNGEPADDR-STDDIMDARLL---DFSSNSGSSNGTRLVDYNPLGWENDGKMVIAVEQPFL 579 (594) Q Consensus 505 -~~ri~~v~v~l~~S~g~~v~~~~~~~~-~~~~~~~~~~~---~~~~~~~~~tg~~~v~~~~~g~~~~~~v~I~~~~P~P 579 (594) |+||+|+++++.+|+++.++....... ......+.+.+ ...+.+++.+|++++|+ .+|+++.+|+|+|++|+| T Consensus 681 ~r~~i~r~~~~~~~sg~~~v~v~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~tg~~~vp~--~~~~~~~~v~i~~d~P~P 758 (777) T protein:vir:80 681 ERTQLHRLTWSLDSTGEVTFRVADQARGESAYTTTPLRLYSRDLGAGLPLAATATLDTPA--RVDMQTAQFSLETDDYYD 758 (777) T ss_pred cCeEEEEEEEEeeccccEEEEEcCCCCcceeeeecCceecccccccccccccceEEEEEE--eecCcceEEEEEECCCCc Confidence 889999999999999998875332211 11111112211 22355777888877764 689999999999999999 Q ss_pred EEEEEEEEEEEeccC Q lcl|Aclame:pro 580 CEVVGVFSVVQSNKV 594 (594) Q Consensus 580 ~tIlai~~~v~~n~~ 594 (594) |+||||++|+.+|+= T Consensus 759 ~tilsi~~e~~y~~r 773 (777) T protein:vir:80 759 MNITSLEYGFRYNQR 773 (777) T ss_pred eEEEEEEEEEEeecc Confidence 999999999999999 No 12 >protein:vir:2203 Length: 794 # NCBI annotation: tail tubular protein B # Family: family:all:825 # MgeID: mge:49 # MgeName: T7 # Cross-refs: genbank:acc:NP_042000;swissprot:sw:p03747;genbank:gi:9627472;uniprot:P03747;genbank:GeneID:1261024 Probab=100.00 E-value=2.1e-131 Score=737.03 Aligned_cols=560 Identities=13% Similarity=0.051 Sum_probs=434.6 Q ss_pred CCcc--cccccccceecchhcccchHHHHHHHHHhhcCcEEeecCCceecCcceeeeeeeCCC---CCEEEEEEEeCCCc Q lcl|Aclame:pro 1 MADF--SQTSFKGGVIAPRLQFNEYESAYHHSIEDAVNFVVTEQGSLITRCGSEEVGLCQDGE---VRLFRLPAVDAPSN 75 (594) Q Consensus 1 m~~~--~~~~f~~Ge~sp~l~~r~d~~~y~~~~~~~~N~~~~~~G~~~~rpg~~~~~~~~~~~---~~~rlipF~~s~~q 75 (594) |+.| +.+||.+| || .|.|++||+++|++|+||++.|+||++||||++||+++++.. +..+|+||.++++| T Consensus 1 M~~i~~s~~n~~~G-vS----qq~D~~ry~~q~~~~~N~~~~~~gG~~rRpG~~fv~~l~~~~~~~~~~~l~~~~~~~~~ 75 (794) T protein:vir:22 1 MALISQSIKNLKGG-IS----QQPDILRYPDQGSRQVNGWSSETEGLQKRPPLVFLNTLGDNGALGQAPYIHLINRDEHE 75 (794) T ss_pred Cceeeeecchhhcc-cc----cCCchHHhhhHHhhhhcceeeccCCceeCCchHhhhhhcccCCCCCccEEEEEEeCCCc Confidence 9998 68999999 55 589999999999999999999999999999999999988643 33456666899999 Q ss_pred eEEEEEeCCeEEEEeCCceEEecccccccccceeeccc--chhhhccceeEecCcEEEEecCCccceeEEeeccCce--- Q lcl|Aclame:pro 76 DVIVEVGNTNIAVWVNDVRQVVANTPSEWRNTIDRIQT--AYDTIGDDAGAANTGRLIMVHPALQPKRLYRDNNNAW--- 150 (594) Q Consensus 76 ~y~le~g~~~~r~~~~~~~~~~~~~~~~~~~~~~~tpy--ta~~l~~i~~aq~adv~~~v~~~~~p~~L~R~~~~~w--- 150 (594) .|+|||+++++|+|..++....... +. .+|| ++....+|+|+|++|++|++|++++|+++.|.+++.| T Consensus 76 ~y~l~~~~~~irv~~~~G~~~~v~~--~~-----~~~y~~~~~~~~~l~~~q~aD~~fi~~~~~~p~~~~~~~~~~~~~~ 148 (794) T protein:vir:22 76 QYYAVFTGSGIRVFDLSGNEKQVRY--PN-----GSNYIKTANPRNDLRMVTVADYTFIVNRNVVAQKNTKSVNLPNYNP 148 (794) T ss_pred EEEEEEcCCeEEEEecCCcEEEeec--CC-----CccceecCCCcccEEEEEEcCEEEEEcCCeeeeEeeccccCCCCCC Confidence 9999999999999998876543321 11 1344 3445678999999999999999999998887554333 Q ss_pred ---------------------------------------------------------------eecc------------- Q lcl|Aclame:pro 151 ---------------------------------------------------------------QFVN------------- 154 (594) Q Consensus 151 ---------------------------------------------------------------~~~~------------- 154 (594) ++.. T Consensus 149 ~~~g~v~v~~g~y~~ty~v~I~~~~~a~~~~p~gt~~~~~~~~~~~~ia~~L~~~l~~~~~~~t~~~~~~~~~i~a~~~~ 228 (794) T protein:vir:22 149 NQDGLINVRGGQYGRELIVHINGKDVAKYKIPDGSQPEHVNNTDAQWLAEELAKQMRTNLSDWTVNVGQGFIHVTAPSGQ 228 (794) T ss_pred CceEEEEccCCccceeEEEEeccCcceEEEEcCCCccccceeechhhhhhhhhhhheeccccceEEeCCceEEEEEcCCc Confidence 0000 Q ss_pred -------------------------------------------------------------------------------- Q lcl|Aclame:pro 155 -------------------------------------------------------------------------------- 154 (594) Q Consensus 155 -------------------------------------------------------------------------------- 154 (594) T Consensus 229 ~~~~~t~~~g~~~t~~~~~~~~~~~~~~lp~~~~~G~~v~i~~~~~~~~~~Y~v~~~~~~~~w~e~~~~~~~~~~~~~t~ 308 (794) T protein:vir:22 229 QIDSFTTKDGYADQLINPVTHYAQSFSKLPPNAPNGYMVKIVGDASKSADQYYVRYDAERKVWTETLGWNTEDQVLWETM 308 (794) T ss_pred eEEEEeeecccCcceeEEEEeccccceeccccCCCCeEEEEEeCCCCCcceeEEEEeccceEEEEeeeccceeeecccce Confidence Q ss_pred ----------------cccceeeecc-ccCCcc-------eEEEEEeceEEEEeCCCCCcEEEEEecccccccccccc-- Q lcl|Aclame:pro 155 ----------------MHTGAVPAEW-SPSNYP-------QTVGIFQNRVWYVGSPVHRTYFWATRAGKLEDIAPSTA-- 208 (594) Q Consensus 155 ----------------~~~~~~p~~~-~~~g~P-------s~v~f~~~RL~~~~~~~~p~~v~~S~~gd~~nF~~~t~-- 208 (594) ..|..+...+ +.+++| ++|+||||||+|++ |++|||||+||||||+++++ T Consensus 309 p~~lv~~~~~~~~~~~~~w~~r~~Gd~~tnp~psf~g~~i~~v~f~q~RL~f~~----~~~v~~Srtgd~~nF~~~t~~~ 384 (794) T protein:vir:22 309 PHALVRAADGNFDFKWLEWSPKSCGDVDTNPWPSFVGSSINDVFFFRNRLGFLS----GENIILSRTAKYFNFYPASIAN 384 (794) T ss_pred eeEeeeccCCcEEEeeccccccccCccccCCcceecCCCcceEEEEcceEEEec----CCeEEEEccCCccccccccCcC Confidence 0000000000 112344 56899999999998 56899999999999999985 Q ss_pred CCCCccEEEEE-cCCccEEE-EEEcCCCEEEEecCcEEEEecCCCcccCcceeEEEeeeecc-cCCcccEEeCCeEEEEE Q lcl|Aclame:pro 209 NNPNDPISFVG-IMEGTPCW-IIASSDVLTIGTTINDYQLAASTGVSVTAATAILRRSSVQG-TAAVQGIPAEEQVIFCS 285 (594) Q Consensus 209 ~~d~d~i~~~~-s~~~~~i~-~~~~~~~L~l~t~~~q~~l~~~~~~~lTP~~~~~~~~s~~g-~~~~~Pv~~g~~v~F~~ 285 (594) +.|||||++++ +++.+.|. +++++++|+|||+++||+|+++ ++|||+|++++++|.++ ++.++|+.+|++++|+| T Consensus 385 ~~DdD~i~~~~ss~~~~~i~~~v~~~~~L~i~t~~~e~~l~~~--~~lTP~~~~~~~~s~~~~~~~~~Pv~vg~~v~f~~ 462 (794) T protein:vir:22 385 LSDDDPIDVAVSTNRIAILKYAVPFSEELLIWSDEAQFVLTAS--GTLTSKSVELNLTTQFDVQDRARPFGIGRNVYFAS 462 (794) T ss_pred CCCCccEEEEecCCcceeeEEEeecCCcEEEEecCcEEEEeCC--CcccceeEEEEEEEEeeccCCCCceEeCCeEEEEe Confidence 46999999955 56667665 5677899999999999999874 48999999999999875 56899999999999999 Q ss_pred cCCCE---EEEEEeeecccceeecchhhhhhhhhcccccccCCceEEEE-EeCCCCeEEEEEcCCCeEEEEEEe---ccc Q lcl|Aclame:pro 286 RNKSK---VYAMNYVREQDNWIPDEMSSQAQHLFTPISSAKGASVRRVA-YISDAAKSLWVVLENGQINYCCFD---RTT 358 (594) Q Consensus 286 ~~g~~---v~e~~~~~~~d~~~~~dls~~a~hl~~~~~~~~~~~i~~~a-~~~~p~~~~~~~~~dg~~~~~ty~---~eq 358 (594) ++|++ +|++.|++.+|+|+++|+|+|++||++ +++..++ ++++|..++|+.+++|++++|+|+ +|| T Consensus 463 ~~g~~~~~~r~~~~~~~~d~y~~~Dlt~~~~~~~~-------~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~y~~~~~e~ 535 (794) T protein:vir:22 463 PRSSFTSIHRYYAVQDVSSVKNAEDITSHVPNYIP-------NGVFSICGSGTENFCSVLSHGDPSKIFMYKFLYLNEEL 535 (794) T ss_pred cCCCeeEEEEeEeeecccCceehhhHHHHHHHhcC-------CceEEEEEeCCCCcEEEEEEcCCCEEEEEEEeecCCce Confidence 99964 366788899999999999999999974 5565665 456667888999999999999996 889 Q ss_pred ceEeEEEeecCCCeEEEEEEEccCCCCEEEEEEEECCCCCcceeEEEEEeccCccccc----ceeeeeeEEc---cCcc- Q lcl|Aclame:pro 359 DTKAWTQLELSGGKVIDIAAAFNPDSDYAYVAVVRSKAINGVQKNYTVLEKISSPRTD----WKRADGWVVA---QVNQ- 430 (594) Q Consensus 359 ~v~aW~~w~~~~g~v~~v~~~~~~~~d~~y~~v~r~~~~~g~~~~~~~le~~~~~~~~----~~~~~~~~~~---~~~~- 430 (594) +|+|||||++ +|.|+++|+.. .+|++|++|+|. +++...|| .|+++..... ..++|+.... .+.+ T Consensus 536 ~v~aW~~~~~-~g~~~~~~~~~--~~d~l~~iv~r~--~~~~~~r~--~~~~~~~~~~~~~~~~~lD~~~~~~~~~g~~~ 608 (794) T protein:vir:22 536 RQQSWSHWDF-GENVQVLACQS--ISSDMYVILRNE--FNTFLARI--SFTKNAIDLQGEPYRAFMDMKIRYTIPSGTYN 608 (794) T ss_pred eEEeeEEEEc-CCCEEEEEEEe--cCCEEEEEEEeC--CCEEEEEE--EEeeccccCCCccceeeeeeeEEEeeccceee Confidence 9999999999 78888888754 479999999994 56777766 3444432221 1233332211 1111 Q ss_pred ----cc-----cccCCcccCceeEEEEeCCeeccCeEecC---CceEEEEecCCCCCeEEEeEeeeeEEEecceeeeCCC Q lcl|Aclame:pro 431 ----NG-----DVLNLDRYIGRTAVIFSKYGLEAEVEVNN---IGLTHRINGYDPNTVYYVGYKMDSYFRTLTPSNGDMK 498 (594) Q Consensus 431 ----~~-----~~~~l~~l~g~tv~i~adg~~~~~~~v~~---~~~tl~~~~~~~~~~v~VG~~y~~~v~~~~~~~~~~~ 498 (594) .. .+.+++|++|+++.+.+||.......+.. +..+++++++.++++|+||++|+++++++||++++++ T Consensus 609 ~~~~~t~~~~~~~~g~~~~~g~~v~~~~dg~~~~~~~~~~~~~~~~~~~v~~~~~~~~v~VGl~y~s~~~~~~~~~~~~~ 688 (794) T protein:vir:22 609 DDTFTTSIHIPTIYGANFGRGKITVLEPDGKITVFEQPTAGWNSDPWLRLSGNLEGRMVYIGFNINFVYEFSKFLIKQTA 688 (794) T ss_pred cCCcceEEEcccccCcccccceEEEEEcCCceeeceeeeeeeeccceEEeCCCCCCcEEEEeeeeeEEEEecceEEEecC Confidence 11 23588999999999999998776655533 2346788999999999999999999999999999998 Q ss_pred Ccccee-----eEEEEEEEEEEEcccceEEeeeecccccccccccccc---ccCCCccccccCcEEEEeecCCcCcceEE Q lcl|Aclame:pro 499 KSMFGS-----KIRISKVQLALFDSIEPTVNGEPADDRSTDDIMDARL---LDFSSNSGSSNGTRLVDYNPLGWENDGKM 570 (594) Q Consensus 499 g~~~~~-----~~ri~~v~v~l~~S~g~~v~~~~~~~~~~~~~~~~~~---~~~~~~~~~~tg~~~v~~~~~g~~~~~~v 570 (594) |..+++ |+||+|+++++.+|+++.++.+........+..+.+. ....+.+++.+|.+++| +.+|+++.+| T Consensus 689 ~~~~~~~~~~grl~l~r~~~~~~~tg~~~v~v~~~~~~~~~~~~~~~~g~~~~~~g~~~~~tg~~~vp--~~~~~~~~~v 766 (794) T protein:vir:22 689 DDGSTSTEDIGRLQLRRAWVNYENSGTFDIYVENQSSNWKYTMAGARLGSNTLRAGRLNLGTGQYRFP--VVGNAKFNTV 766 (794) T ss_pred CCccceeeecceEEEEEEEEEeccccceEEEEcCCCcccceeecCceecccccccCcccccCceEEEE--ecccCceEEE Confidence 866543 7899999999999999998765433322222222332 23346667778877665 4689999999 Q ss_pred EEEECCCcCEEEEEEEEEEEeccC Q lcl|Aclame:pro 571 VIAVEQPFLCEVVGVFSVVQSNKV 594 (594) Q Consensus 571 ~I~~~~P~P~tIlai~~~v~~n~~ 594 (594) +|+|++|+||+|+||++|..+|+- T Consensus 767 ~i~~d~p~P~tvlsi~~eg~y~~r 790 (794) T protein:vir:22 767 YILSDETTPLNIIGCGWEGNYLRR 790 (794) T ss_pred EEEECCCCCEEEEEEeEEEEEecc Confidence 999999999999999999999999 No 13 >protein:vir:10452 Length: 794 # NCBI annotation: tail protein # Family: family:all:825 # MgeID: mge:184 # MgeName: phiA1122 # Cross-refs: genbank:acc:NP_848299;genbank:gi:30387490;genbank:GeneID:1733952 Probab=100.00 E-value=9.6e-131 Score=733.38 Aligned_cols=560 Identities=13% Similarity=0.043 Sum_probs=431.8 Q ss_pred CCcc--cccccccceecchhcccchHHHHHHHHHhhcCcEEeecCCceecCcceeeeeeeCCC--CCEEEEEEEeC-CCc Q lcl|Aclame:pro 1 MADF--SQTSFKGGVIAPRLQFNEYESAYHHSIEDAVNFVVTEQGSLITRCGSEEVGLCQDGE--VRLFRLPAVDA-PSN 75 (594) Q Consensus 1 m~~~--~~~~f~~Ge~sp~l~~r~d~~~y~~~~~~~~N~~~~~~G~~~~rpg~~~~~~~~~~~--~~~rlipF~~s-~~q 75 (594) ||++ .++||.+| +..|.|++||+++|++|+||++.|+||++||||++||+++++++ +..++++|.+. +++ T Consensus 1 M~~i~~s~~n~~~G-----vSqq~D~~Ry~~q~~~~~N~~~~~~gG~~rRpGt~fv~~l~~~~~~~~~~~~~~~~rd~~e 75 (794) T protein:vir:10 1 MALISQSIKNLKGG-----ISQQPDILRYPDQGSRQVNGWSSETEGLQKRPPLVFLKTLGDNGALGQAPYIHLINRDENE 75 (794) T ss_pred Ccceeeecchhhcc-----cccCCchHHhhhhHhhhhcceeeeccCcccCcchhhheeccCCCccccceeeeEEecCCCc Confidence 9998 68999999 66889999999999999999999999999999999999999765 45566788775 566 Q ss_pred eEEEEEeCCeEEEEeCCceEEecccccccccceeeccc--chhhhccceeEecCcEEEEecCCccceeEEeec------- Q lcl|Aclame:pro 76 DVIVEVGNTNIAVWVNDVRQVVANTPSEWRNTIDRIQT--AYDTIGDDAGAANTGRLIMVHPALQPKRLYRDN------- 146 (594) Q Consensus 76 ~y~le~g~~~~r~~~~~~~~~~~~~~~~~~~~~~~tpy--ta~~l~~i~~aq~adv~~~v~~~~~p~~L~R~~------- 146 (594) .|+++|+++++|+|..++....-. .+. .+|| ++..+.+|+++|++|++|++|++++|+...+.. T Consensus 76 ~~~v~~~~~~irv~~~~G~~~~v~--~~~-----~~~Y~~aa~~~~~l~~~q~aD~~fivn~~~~~~~~~~~~~~~~~~~ 148 (794) T protein:vir:10 76 QYYAVFTGTGIRVFDLAGNEKQVR--YPN-----GSNYIKTANPRSDLRMVTVADYTFIVNRNVVVQKDPNSVNLANYNP 148 (794) T ss_pred eEEEEEeCCeEEEEEcCCcEEEEE--cCC-----CCcceecCCCcceEEEEEEcCEEEEEcCCeeeeeeccccccCCCCC Confidence 778889999999998766332111 111 1355 344677799999999999999888887422110 Q ss_pred -------------------------------------------------------------------------------- Q lcl|Aclame:pro 147 -------------------------------------------------------------------------------- 146 (594) Q Consensus 147 -------------------------------------------------------------------------------- 146 (594) T Consensus 149 ~~~~~~~v~~g~y~r~y~i~i~~~~~at~~tpdgt~~~~~~~~s~~~ia~~L~~~l~a~~~g~t~~~~g~~i~i~a~s~~ 228 (794) T protein:vir:10 149 KQDGLINIRGGQYGRELIVHINGKDVATYKIPDGSKPEHVNNTDAQWLAERLAKQMRINLSGWTVNVGQGFIHVTAPSGQ 228 (794) T ss_pred CccEEEEecccccceEEEeccCCcceeEEEecCCCCcccceecchhhhhhhhhhhhhcccCCceEEeCCeEEEEEeccCc Confidence Q ss_pred -------------------------------------------------------------------------------- Q lcl|Aclame:pro 147 -------------------------------------------------------------------------------- 146 (594) Q Consensus 147 -------------------------------------------------------------------------------- 146 (594) T Consensus 229 ~~~t~s~~~~~~~~~~~~v~~~~~~~~~lp~~~~~G~~v~i~~~~~~~~~~yyv~~~~~~~~w~E~~~~g~~~~~~~~tm 308 (794) T protein:vir:10 229 QIDSFTTKDGYADQLINPVTHYAQSFSKLPPNAPNGYMVKIVGDASKSADQYYVRYDAERKVWTETLGWNTENQVLLETM 308 (794) T ss_pred eeccccccCCcCcceeEEEEeccCcceecccCCCCCcEEEEEeCCCCCcceeEEEEEcCCcEEEEecccceeEEEecccc Confidence Q ss_pred --------cCceeecccccceeeeccc--------cCCcceEEEEEeceEEEEeCCCCCcEEEEEeccccccccccccC- Q lcl|Aclame:pro 147 --------NNAWQFVNMHTGAVPAEWS--------PSNYPQTVGIFQNRVWYVGSPVHRTYFWATRAGKLEDIAPSTAN- 209 (594) Q Consensus 147 --------~~~w~~~~~~~~~~p~~~~--------~~g~Ps~v~f~~~RL~~~~~~~~p~~v~~S~~gd~~nF~~~t~~- 209 (594) +++|++...+|..+..+++ .+.+|++|+||||||+|++ ||+|||||+||||||++++++ T Consensus 309 P~~l~r~~~~t~~~~~~~w~~r~~Gd~~tnp~psf~g~~~~~v~f~q~RL~f~~----~~~v~~Srtgd~~nF~~~t~~~ 384 (794) T protein:vir:10 309 PHALVRAADGNFDFKWLEWSPKSCGDVDTNPWPSFVGSSINDVFFFRNRLGFLS----GENIILSRTAKYFNFYPASIAN 384 (794) T ss_pred eeEEEEeccceEEeeecccccccccccccCccCcccCCCccEEEEEcceEEEee----CCeEEEEecCCccccccccccc Confidence 0000000000001100110 1224566899999999998 578999999999999999864 Q ss_pred -CCCccEEEEE-cCCccEEE-EEEcCCCEEEEecCcEEEEecCCCcccCcceeEEEeeeeccc-CCcccEEeCCeEEEEE Q lcl|Aclame:pro 210 -NPNDPISFVG-IMEGTPCW-IIASSDVLTIGTTINDYQLAASTGVSVTAATAILRRSSVQGT-AAVQGIPAEEQVIFCS 285 (594) Q Consensus 210 -~d~d~i~~~~-s~~~~~i~-~~~~~~~L~l~t~~~q~~l~~~~~~~lTP~~~~~~~~s~~g~-~~~~Pv~~g~~v~F~~ 285 (594) .|||||++++ +++.+.|. +++++++|+|||+++||+|+++ ++|||+|++++++|.+++ +.++|+.+|++++|++ T Consensus 385 ~~DdD~I~~~~ss~~~~~i~~~v~~~~~L~i~T~~~q~~l~~~--~~lTP~~~~~~~~s~~~~~~~~~Pv~vg~~v~f~~ 462 (794) T protein:vir:10 385 LSNDDPIDVAVSTNRIAILKYAVPFSEELLIWSDEAQFVLTAS--GTLTSRSVELNLTTQFDVQDRARPYGIGRNVYFAS 462 (794) T ss_pred CCCCccEEEEecCCcceeeEEEeecCCcEEEEecCcEEEEeCC--CcccceeEEEEEEEeecccCCCCceEeCCeEEEEe Confidence 6999999955 56667665 5777899999999999999875 489999999999998886 5799999999999999 Q ss_pred cCCCE--E-EEEEeeecccceeecchhhhhhhhhcccccccCCceEEE-EEeCCCCeEEEEEcCCCeEEEEEEe---ccc Q lcl|Aclame:pro 286 RNKSK--V-YAMNYVREQDNWIPDEMSSQAQHLFTPISSAKGASVRRV-AYISDAAKSLWVVLENGQINYCCFD---RTT 358 (594) Q Consensus 286 ~~g~~--v-~e~~~~~~~d~~~~~dls~~a~hl~~~~~~~~~~~i~~~-a~~~~p~~~~~~~~~dg~~~~~ty~---~eq 358 (594) ++|++ + |++.|++.+|+|+++|||+|++||++ +++..+ +++++|..++|+.++||++++|+|+ +|| T Consensus 463 ~~g~~~~~~r~~~~~~~~d~y~a~Dlt~~~~hl~~-------~~v~~~~~~~~~~~~~~~~~~~~~~l~~~~y~~~~~e~ 535 (794) T protein:vir:10 463 PRSSYTSIHRYYAVQDVSSVKNSEDITSHVPNYIP-------NGVFSICGSGTENFCSVLSHGDPSKIFMYKFLYLNEEL 535 (794) T ss_pred cCCCeeEEEEEeeeccccCceehhhHHHHHHHhcC-------CceEEEEEeCCCCcEEEEEEcCCCEEEEEEEeecCCce Confidence 99864 4 55789999999999999999999984 455555 5566777889999999999999997 889 Q ss_pred ceEeEEEeecCCCeEEEEEEEccCCCCEEEEEEEECCCCCcceeEEEEEeccCccccc----ceeeeeeEEcc---Ccc- Q lcl|Aclame:pro 359 DTKAWTQLELSGGKVIDIAAAFNPDSDYAYVAVVRSKAINGVQKNYTVLEKISSPRTD----WKRADGWVVAQ---VNQ- 430 (594) Q Consensus 359 ~v~aW~~w~~~~g~v~~v~~~~~~~~d~~y~~v~r~~~~~g~~~~~~~le~~~~~~~~----~~~~~~~~~~~---~~~- 430 (594) +|+|||||++ +|.|+++|+.. .+|++|++|+| ++++...|| .|+++...+. ..++|+...+. +.+ T Consensus 536 ~v~aW~~~~~-~g~~~~~~~~~--~~d~l~~iv~r--~~~~~~~r~--~~~~~~~~~~~~~~~~~lD~~~~~~~~~~~~~ 608 (794) T protein:vir:10 536 RQQSWSHWDF-GENVQVLACQS--ISSDMYVILRN--EFNTFLARI--SFTKNAIDLQGEPYRAFMDMKIRYTIPSGTYN 608 (794) T ss_pred EEEeEEEEEc-CCcEEEEEEEe--cCCeEEEEEEe--CCCEEEEEE--EEeecCCCCCCccceeeeecceEEEecCcccc Confidence 9999999999 78888888754 46899999999 467777776 3444432222 23344433221 111 Q ss_pred ---------cccccCCcccCceeEEEEeCCeec---cCeEecCCceEEEEecCCCCCeEEEeEeeeeEEEecceeeeCCC Q lcl|Aclame:pro 431 ---------NGDVLNLDRYIGRTAVIFSKYGLE---AEVEVNNIGLTHRINGYDPNTVYYVGYKMDSYFRTLTPSNGDMK 498 (594) Q Consensus 431 ---------~~~~~~l~~l~g~tv~i~adg~~~---~~~~v~~~~~tl~~~~~~~~~~v~VG~~y~~~v~~~~~~~~~~~ 498 (594) ...+.+++|++|+++.+.+||... ....+..+..+++++++.++++|+||++|+++++|+||++++++ T Consensus 609 ~~~~~t~~~~~~~~g~~~~eg~~v~~~adg~~~~~~~~~~~~~g~~~l~i~~~~~a~~v~vGl~y~s~~~~~~~~i~~~~ 688 (794) T protein:vir:10 609 DDTFTTSIHIPTIYGANFGRGKITVLEPDGKITVFEQPTSGWQSDPWLRLSGNLEGREVFIGFNINFVYEFSKFLIKQTT 688 (794) T ss_pred cccccceEEcccccCcccccccEEEEecCCceeeeeeeeeeeecceEEEecCCCCCceEEEeeeeeEEEEecceEEEccC Confidence 123468999999999999999644 34455567788999999999999999999999999999999999 Q ss_pred Ccccee-----eEEEEEEEEEEEcccceEEeeeeccccccccccccc---cccCCCccccccCcEEEEeecCCcCcceEE Q lcl|Aclame:pro 499 KSMFGS-----KIRISKVQLALFDSIEPTVNGEPADDRSTDDIMDAR---LLDFSSNSGSSNGTRLVDYNPLGWENDGKM 570 (594) Q Consensus 499 g~~~~~-----~~ri~~v~v~l~~S~g~~v~~~~~~~~~~~~~~~~~---~~~~~~~~~~~tg~~~v~~~~~g~~~~~~v 570 (594) |+.+++ |+||+|+++++.+|+++.++.+........+..+.+ .....+.+++.+|++++|+ .+|+++.+| T Consensus 689 ~~~~~~~~~~gr~~l~r~~~~~~~tg~~~v~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~~tg~~~vp~--~g~~~~~~v 766 (794) T protein:vir:10 689 DDGSTSTEDIGRLQLRRAWVNYEDSGTFDIYVENQSSNWKYTMAGARLGSNTLRAGRLNLGTGQYRFPV--VGNAKFNTV 766 (794) T ss_pred CCcceeeeccccEEEEEEEEEeeccccEEEEEcCCccccceeeccceeccccccccccccccceEEEEe--cccCceEEE Confidence 987764 789999999999999999876543322222222222 2244567778888877764 689999999 Q ss_pred EEEECCCcCEEEEEEEEEEEeccC Q lcl|Aclame:pro 571 VIAVEQPFLCEVVGVFSVVQSNKV 594 (594) Q Consensus 571 ~I~~~~P~P~tIlai~~~v~~n~~ 594 (594) +|+|++|+||+|+||++|..+|+- T Consensus 767 ~i~~d~P~P~tvlsi~~eg~y~~r 790 (794) T protein:vir:10 767 YILSDETTPLNIIGCGWEGNYLRR 790 (794) T ss_pred EEEECCCCceEEEEEEEEEEEecc Confidence 999999999999999999999999 No 14 >protein:vir:6326 Length: 826 # NCBI annotation: tail tubular protein B # Family: family:all:825 # MgeID: mge:132 # MgeName: phiKMV # Cross-refs: genbank:acc:NP_877473;genbank:gi:33300845;uniprot:Q7Y2D1;genbank:GeneID:1482615 Probab=100.00 E-value=6.8e-129 Score=723.23 Aligned_cols=558 Identities=12% Similarity=0.070 Sum_probs=442.4 Q ss_pred CCcc--cccccccceecchhcccchHHHHHHHHHhhcCcEEeecCCceecCcceeeeeeeCCCCCEEEEEEEe-----CC Q lcl|Aclame:pro 1 MADF--SQTSFKGGVIAPRLQFNEYESAYHHSIEDAVNFVVTEQGSLITRCGSEEVGLCQDGEVRLFRLPAVD-----AP 73 (594) Q Consensus 1 m~~~--~~~~f~~Ge~sp~l~~r~d~~~y~~~~~~~~N~~~~~~G~~~~rpg~~~~~~~~~~~~~~rlipF~~-----s~ 73 (594) |+.| ..+||.+| +..|.|+.||.++|++|+||++.|+||++||||++||+.++++++ .+|+||.| +. T Consensus 1 M~~i~~s~~n~~~G-----vSqq~d~~r~~~q~~~~~N~~~~~~~G~~rRpg~~~v~~~~~~~~-~~~~~~~~~~~r~~~ 74 (826) T protein:vir:63 1 MSYKQSAYPNLLMG-----VSQQVPFERLPGQLSEQINMVSDPVSGLRRRSGIELMAHLLHTDQ-PWPRPFLYHTNLGGR 74 (826) T ss_pred Cceeeeecchhhcc-----eeccCchHhhhhhhhhhhcceeeccCCcccCchhHhhhhhccCCc-cccccEEEEEecCCC Confidence 9998 68999999 556999999999999999999999999999999999999998754 78999999 78 Q ss_pred CceEEEEEeCCeEEEEeC-CceEEecccccccccceeecccchhhhccceeEecCcEEEEecCCcccee----EEeeccC Q lcl|Aclame:pro 74 SNDVIVEVGNTNIAVWVN-DVRQVVANTPSEWRNTIDRIQTAYDTIGDDAGAANTGRLIMVHPALQPKR----LYRDNNN 148 (594) Q Consensus 74 ~q~y~le~g~~~~r~~~~-~~~~~~~~~~~~~~~~~~~tpyta~~l~~i~~aq~adv~~~v~~~~~p~~----L~R~~~~ 148 (594) +|+|++||+++++|+|.. ++..+.... +. .+++++..+.+|+++|++|++|++|++++|+. +.+.++. T Consensus 75 ~~~~~~~~~~g~irv~~~~~g~~~~~~~--~~-----~~y~~~~~~~~l~~~t~aD~~fi~n~~~~p~~~~~~~~~~~~~ 147 (826) T protein:vir:63 75 SIAMLVAQHRGELYLFDERDGRLLMGQP--LV-----HDYLKANDYRQLRAATVADDLFIANLSVKPEADRTDIKGVDPN 147 (826) T ss_pred ceEEEEEecCCcEEEEEcCCCeEEEcCC--CC-----CceeeecCccceEEEEeCCEEEEEeCCeeeeeccccccccCCC Confidence 999999999999999965 444433221 11 12345556778899999999999998888762 2221111 Q ss_pred ce------------------------------------------------------------------------------ Q lcl|Aclame:pro 149 AW------------------------------------------------------------------------------ 150 (594) Q Consensus 149 ~w------------------------------------------------------------------------------ 150 (594) .| T Consensus 148 ~~~~~~v~~g~Y~~~y~vti~~~~~~~gt~~s~t~t~~t~~~~~a~~~~~~~~~~~s~~yia~~l~~~~~a~~~~~~~~~ 227 (826) T protein:vir:63 148 KAGWLYIKAGQYSKAFSMTIKVKDNATGTTYSHTATYVTPDNASTNPNLAEAPFQTSVGYIAWQLYGKFFGAPEYTLPNS 227 (826) T ss_pred CcEEEEeeccccCceEEEEEEeccccCCccccceEEEEeccCCcccccccccceeeeeeeeeeeceeeeeeccccccCCC Confidence 00 Q ss_pred -------------------------------------------------------------------------------- Q lcl|Aclame:pro 151 -------------------------------------------------------------------------------- 150 (594) Q Consensus 151 -------------------------------------------------------------------------------- 150 (594) T Consensus 228 t~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~ 307 (826) T protein:vir:63 228 TKKYPKVDPDANAATIAGYLNQRGVQDGYIAFRGDADIHVEVSTDMGNNYGIASGGMSLNATADLPALLPGVGAPGVGVQ 307 (826) T ss_pred ccccceecCCcccceeecceeEecccccEEEEeeCCcccEEEccCCCCcceEEEEEeeccceeeccccCCCcccceEEEe Confidence Q ss_pred -------------------------------------------------------eecccccceeeeccc--------cC Q lcl|Aclame:pro 151 -------------------------------------------------------QFVNMHTGAVPAEWS--------PS 167 (594) Q Consensus 151 -------------------------------------------------------~~~~~~~~~~p~~~~--------~~ 167 (594) ++.+..|..+..+++ .+ T Consensus 308 ~~~~~~~~~g~~~d~~y~~~~~~~~~w~e~~~~~~~~~~~tmp~~l~~~~~~~~f~~~~~~w~~r~~Gd~~tnp~psf~g 387 (826) T protein:vir:63 308 FMDGAVMATGSTKAPVYFEWDSANRRWAERAAYGTDWVLKKMPLALRWDEATDTYSLNELEYDRRGSGDEDTNPTFNFVT 387 (826) T ss_pred eEEeEEecCCCcccceEEEEEcCCceEEEEeecCcccccccceEEEEEeccCCeEEEeccccccccccccccCCCccccC Confidence 000000111000000 23 Q ss_pred CcceEEEEEeceEEEEeCCCCCcEEEEEecccccccccccc--CCCCccEEEEE-cCCccEEE-EEEcCCCEEEEecCcE Q lcl|Aclame:pro 168 NYPQTVGIFQNRVWYVGSPVHRTYFWATRAGKLEDIAPSTA--NNPNDPISFVG-IMEGTPCW-IIASSDVLTIGTTIND 243 (594) Q Consensus 168 g~Ps~v~f~~~RL~~~~~~~~p~~v~~S~~gd~~nF~~~t~--~~d~d~i~~~~-s~~~~~i~-~~~~~~~L~l~t~~~q 243 (594) .||++|+||||||+|++ |++|||||+||||||+++++ ..|||||++++ +++.+.|. +++++++|+|||+++| T Consensus 388 ~~~~~v~f~q~RL~f~~----~~~v~~Srtgd~~nF~~~s~~~~~DdD~I~~~~ss~~~~~i~~~v~~~~~L~l~T~~~q 463 (826) T protein:vir:63 388 RGITGMTTFQGRLVLLS----QEYVCMSASNNPHRWFKKSAAALNDDDPIEIAAQGSLTEPYEHAVTFNKDLIVFAKKYQ 463 (826) T ss_pred CCceEEEEEeceEEEee----CCeEEEEccCCccccccccccCCCCCccEEEEEcCCcceeeEEEeecCCcEEEEecCcE Confidence 47888999999999998 46899999999999999985 46999999954 56667764 5778899999999999 Q ss_pred EEEecCCCcccCcceeEEEeeeec-ccCCcccEEeCCeEEEEEcCC---CEEEEEEeeeccc-ceeecchhhhhhhhhcc Q lcl|Aclame:pro 244 YQLAASTGVSVTAATAILRRSSVQ-GTAAVQGIPAEEQVIFCSRNK---SKVYAMNYVREQD-NWIPDEMSSQAQHLFTP 318 (594) Q Consensus 244 ~~l~~~~~~~lTP~~~~~~~~s~~-g~~~~~Pv~~g~~v~F~~~~g---~~v~e~~~~~~~d-~~~~~dls~~a~hl~~~ 318 (594) |+|+++ ++|||+|++++++|.+ +++.|+|+.+|++++|+|++| ++||||.|+.+.| .|.++|+|.|++||+ T Consensus 464 ~~ls~~--~~lTP~~~~i~~~s~~~~~~~~~Pv~vG~~v~Fv~~~g~~~s~v~e~~~~~d~~~~y~~~dlt~~~~~l~-- 539 (826) T protein:vir:63 464 AVVPGG--GIVTPRTAVISITTQYDLDTRAAPAVTGRSVYFAAERALGFMGLHEMAPSPSTDSHYVAEDVTSHIPSYM-- 539 (826) T ss_pred EEEeCC--CcccceeEEEEEEEeecccCCCCceEeCCeEEEEecCCCceeEEEEEEeeeccccceehhHHHHHHHHhc-- Confidence 999874 4899999999999976 557899999999999999887 4899999997766 599999999999997 Q ss_pred cccccCCceEEEEEeCCCCeEEEEEcCCCeEEEEEEe---cccceEeEEEeecCCCeEEEEEEEccCCCCEEEEEEEECC Q lcl|Aclame:pro 319 ISSAKGASVRRVAYISDAAKSLWVVLENGQINYCCFD---RTTDTKAWTQLELSGGKVIDIAAAFNPDSDYAYVAVVRSK 395 (594) Q Consensus 319 ~~~~~~~~i~~~a~~~~p~~~~~~~~~dg~~~~~ty~---~eq~v~aW~~w~~~~g~v~~v~~~~~~~~d~~y~~v~r~~ 395 (594) +++|.+|++|++|++++|++++||++++|+|+ +||+|+|||||++ +|+|++||++ +|++|++|+|. T Consensus 540 -----~~~v~~~a~s~~~~~v~~~~~~dg~l~~~~y~~~~~e~~v~aW~~~~~-~g~v~~~~~i----~d~l~~iv~r~- 608 (826) T protein:vir:63 540 -----PGPAEYIQAAASSGYLVFGTSTADEMICHQYLWQGNEKVQNAFHRWTL-RHQIIGAYFT----GDNLMVLIQKG- 608 (826) T ss_pred -----CCCeEEEEEcCCCCEEEEEEcCCCEEEEEEEeeCCCcEEEEeEEEEec-CCcEEEEEEE----CCeEEEEEEeC- Confidence 46899999999999999999999999999997 8999999999999 7999999998 68999999994 Q ss_pred CCCcceeEEEEEeccCccc-------ccceeeeeeEEccCcccccc--cCCcccCceeEEEEeCCeeccC----eEecCC Q lcl|Aclame:pro 396 AINGVQKNYTVLEKISSPR-------TDWKRADGWVVAQVNQNGDV--LNLDRYIGRTAVIFSKYGLEAE----VEVNNI 462 (594) Q Consensus 396 ~~~g~~~~~~~le~~~~~~-------~~~~~~~~~~~~~~~~~~~~--~~l~~l~g~tv~i~adg~~~~~----~~v~~~ 462 (594) +++...|+ .+|+++... ..+.+.++.+.......... .+++|+++..+.+++|+.+.+. ..+.++ T Consensus 609 -~~~~~~r~-~~e~~~~~~~~~~~~~d~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 686 (826) T protein:vir:63 609 -QEIALGRM-HLNSLPAREGLQYPKYDYWRRIEATVAGELELTKQHWDLIKDASAVYQLQPVAGAYMERTHLGVKRETNT 686 (826) T ss_pred -CCEEEEEE-EEEecCCccccccCCccceEEEEEeeeeeeccCcceeecccCcccccEEEEeeCccccCCccceEEecCC Confidence 66777775 477775432 12334455555444433322 3788999999999999988654 456678 Q ss_pred ceEEEEecCCCCCeEEEeEeeeeEEEecceeeeCCCCcccee-eEEEEEEEEEEEcccceEEeeeecccc--cccccccc Q lcl|Aclame:pro 463 GLTHRINGYDPNTVYYVGYKMDSYFRTLTPSNGDMKKSMFGS-KIRISKVQLALFDSIEPTVNGEPADDR--STDDIMDA 539 (594) Q Consensus 463 ~~tl~~~~~~~~~~v~VG~~y~~~v~~~~~~~~~~~g~~~~~-~~ri~~v~v~l~~S~g~~v~~~~~~~~--~~~~~~~~ 539 (594) .++|.++++..+++|+||++|+++++|+||++++++|..+++ |+||+|+++++.+|+++.++....... ...+.... T Consensus 687 ~v~l~~~~~~~~~~v~VGl~y~s~~~~~~~~~~~~~g~~~~~gr~~l~r~~~~~~~tg~~~v~v~~~~~~~~~~~~~~~~ 766 (826) T protein:vir:63 687 KVFLDVPEAVVGAVYVVGCEFWSKVEFTPPVLRDHNGLPMTSTRAVLHRYNVNFGWTGEFLWRISDTARPNQPWYDTTPL 766 (826) T ss_pred EEEEecCCCccccEEEEeeeeeEEEEecceEEEccCCCcceeccEEEEEEEEEeeccccEEEEecCccccceeEeecCCc Confidence 889999999999999999999999999999999999999877 899999999999999998875432211 11111112 Q ss_pred cc---ccCCCccccccCcEEEEeecCCcCcceEEEEEECCCcCEEEEEEEEEEEeccC Q lcl|Aclame:pro 540 RL---LDFSSNSGSSNGTRLVDYNPLGWENDGKMVIAVEQPFLCEVVGVFSVVQSNKV 594 (594) Q Consensus 540 ~~---~~~~~~~~~~tg~~~v~~~~~g~~~~~~v~I~~~~P~P~tIlai~~~v~~n~~ 594 (594) ++ ....+.+...+|++.+| +.+++++.+|+|+|+.|+||+|++|+++..+|+= T Consensus 767 ~~~~~~~~~g~p~~~t~~~~vP--~~~~~~~~~i~i~~d~P~p~~il~i~~~~~yn~r 822 (826) T protein:vir:63 767 RLFSRQLNAGEPLVDSAVVPLP--ARVDMATSKFELSCHSPYDMNVRAVEYNFKSNQT 822 (826) T ss_pred eecccccccccccccceEEEEE--EeeccceEEEEEEeCCCCcEEEEEEEEEEEEece Confidence 22 12335555556665554 5688999999999999999999999999999998 No 15 >protein:vir:78957 Length: 826 # NCBI annotation: putative tail tubular protein B # Family: family:all:825 # MgeID: mge:1860 # MgeName: LKD16 # Cross-refs: genbank:acc:YP_001522826;genbank:gi:158345061;genbank:GeneID:5687447 Probab=100.00 E-value=3.6e-129 Score=724.77 Aligned_cols=557 Identities=11% Similarity=0.049 Sum_probs=428.2 Q ss_pred CCcc--cccccccceecchhcccchHHHHHHHHHhhcCcEEeecCCceecCcceeeeeeeCCCCCEEEEEEEe-----CC Q lcl|Aclame:pro 1 MADF--SQTSFKGGVIAPRLQFNEYESAYHHSIEDAVNFVVTEQGSLITRCGSEEVGLCQDGEVRLFRLPAVD-----AP 73 (594) Q Consensus 1 m~~~--~~~~f~~Ge~sp~l~~r~d~~~y~~~~~~~~N~~~~~~G~~~~rpg~~~~~~~~~~~~~~rlipF~~-----s~ 73 (594) |+.| ..+||.+| +..|.|+.||.++|++|+||++.|+||++||||++||+.++++++ .+++||+| ++ T Consensus 1 M~~i~~~~~nl~gG-----vSqq~d~~r~~~q~~~~~N~~~~~~gG~~rRpgt~~va~~~~~~~-~~~~~f~~~~~r~s~ 74 (826) T protein:vir:78 1 MSYKQSAYPNLLMG-----VSQQVAFERLPGQLSEQINMVSDPVSGLRRRSGIELMASLLHTDQ-PWPRPYLYHTNLGGR 74 (826) T ss_pred Ccceeeecchhccc-----eecccchHhhhhhhhhhhcceeccccccccCCchHhhhhhccCCc-CCceeEEEEeccCCc Confidence 9998 68999999 556999999999999999999999999999999999999998754 79999998 78 Q ss_pred CceEEEEEeCCeEEEEeCCceEEecccccccccceeecccchhhhccceeEecCcEEEEecCCccceeEE-eeccC---- Q lcl|Aclame:pro 74 SNDVIVEVGNTNIAVWVNDVRQVVANTPSEWRNTIDRIQTAYDTIGDDAGAANTGRLIMVHPALQPKRLY-RDNNN---- 148 (594) Q Consensus 74 ~q~y~le~g~~~~r~~~~~~~~~~~~~~~~~~~~~~~tpyta~~l~~i~~aq~adv~~~v~~~~~p~~L~-R~~~~---- 148 (594) +|+|+|||+++++|+|...+.......+. ..++|+++++.+|+++|++|++|++|+.++|.... +.... T Consensus 75 e~~~~l~~~~g~irv~~~~~g~~~~~~~~------~~~y~~~~~~~~l~~~t~aD~~fi~n~~~~p~~~~~~~~~~~~~~ 148 (826) T protein:vir:78 75 SIAMLVAQHRGELYLFDEKDGRLLMGQPL------VHDYLKASDYRQLRAATVADDLFIANLEVRPEADKADVLGVDPSK 148 (826) T ss_pred ceEEEEEEcCCcEEEEECCCCEEEEecCc------ccceeecCCcceeEEEEEcCEEEEEcCcEeeeeccccccCCCCCc Confidence 89999999999999996433333222221 23688888999999999999999999999875310 00000 Q ss_pred -------------------------------------------------------------------------------- Q lcl|Aclame:pro 149 -------------------------------------------------------------------------------- 148 (594) Q Consensus 149 -------------------------------------------------------------------------------- 148 (594) T Consensus 149 ~~~~~v~~g~y~~~y~v~i~~~~~~~~~~~s~t~~y~t~~~~~~~~~~~~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~t 228 (826) T protein:vir:78 149 TGWLYIKAGQYSKAFSLTIKVKDNATGTTYSHTATYVTPDNASTNPNLAEAPFQTSVGYIAWQLFGKFFGAPEYTLPNST 228 (826) T ss_pred eEEEEecccccCceeEEEeccceeecccccceeEEEEeccCCccccccccccceecchhhheecceeeccccceeeeccc Confidence Q ss_pred ---------------------------cee-------------------------------------------------- Q lcl|Aclame:pro 149 ---------------------------AWQ-------------------------------------------------- 151 (594) Q Consensus 149 ---------------------------~w~-------------------------------------------------- 151 (594) .|. T Consensus 229 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~l~a~~p~~~~~~~~~~~ 308 (826) T protein:vir:78 229 KKYPKVDPDPAAATVAGYLNQRGVQDGYIAFRGDGDIVVEVSTDMGNNYGIASGGMSLNATADLPALLPGAGTPGTGVQF 308 (826) T ss_pred eeEeeccccccceeeccceeecccccceEEEecCCCeEEEeccCCCccceEEEeeEEEecccceeeeecccccceEEEEE Confidence 000 Q ss_pred -------------------------------------------------------ecccccceeeeccc--------cCC Q lcl|Aclame:pro 152 -------------------------------------------------------FVNMHTGAVPAEWS--------PSN 168 (594) Q Consensus 152 -------------------------------------------------------~~~~~~~~~p~~~~--------~~g 168 (594) +...+|..+...++ .+. T Consensus 309 ~~~~~~~~g~~~~~~y~~~~~~~~~w~e~a~~g~~~~~~tmp~~l~~~~~~~~f~~~~~~w~~r~~gd~~tnp~psf~g~ 388 (826) T protein:vir:78 309 MDGAIMATGSTKAPVYFAWDAANRRWAERAAYGTDWVLKKMPLALRWDESTDTYSLNELEYDRRGSGDEETNPTFNFVKR 388 (826) T ss_pred EeeeEecCCCcccceeEEEEcCCceEEEeeccCcccccccccEEEEEecCCCeEEEeeccccccccCcccccCcccccCC Confidence 00000000000000 123 Q ss_pred cceEEEEEeceEEEEeCCCCCcEEEEEecccccccccccc--CCCCccEEEEE-cCCccEEE-EEEcCCCEEEEecCcEE Q lcl|Aclame:pro 169 YPQTVGIFQNRVWYVGSPVHRTYFWATRAGKLEDIAPSTA--NNPNDPISFVG-IMEGTPCW-IIASSDVLTIGTTINDY 244 (594) Q Consensus 169 ~Ps~v~f~~~RL~~~~~~~~p~~v~~S~~gd~~nF~~~t~--~~d~d~i~~~~-s~~~~~i~-~~~~~~~L~l~t~~~q~ 244 (594) +|++|+||||||+|++ ||+|||||+|||+||+++++ ..|||||++++ +++.+.|. +++++++|+|||+++|| T Consensus 389 ~i~~v~f~q~RL~f~~----~~~v~~Srtgd~~nF~~~t~~~~~DdD~I~~~~~s~~~~~i~~~v~~~~~L~l~T~~~e~ 464 (826) T protein:vir:78 389 GITGMTTFQGRLVLLS----QEYVCMSASNNPHRWFKKSAAALNDDDPIEIAAQGSLTEPYEHAVTFNKDLIVFAKKYQA 464 (826) T ss_pred CceEEEEEeceEEEee----CCeEEEEeccCccccccccccCCCCCCcEEEEEccCcceeEEEEEecCCcEEEEecCcEE Confidence 5667899999999998 57899999999999999985 46999999954 56667765 56778999999999999 Q ss_pred EEecCCCcccCcceeEEEeeeeccc-CCcccEEeCCeEEEEEcCC---CEEEEEEeeeccc-ceeecchhhhhhhhhccc Q lcl|Aclame:pro 245 QLAASTGVSVTAATAILRRSSVQGT-AAVQGIPAEEQVIFCSRNK---SKVYAMNYVREQD-NWIPDEMSSQAQHLFTPI 319 (594) Q Consensus 245 ~l~~~~~~~lTP~~~~~~~~s~~g~-~~~~Pv~~g~~v~F~~~~g---~~v~e~~~~~~~d-~~~~~dls~~a~hl~~~~ 319 (594) +|+++ ++|||+|+.++++|.+++ +.++|+.+|++++|++++| ++||||.|+.+.+ .|+++|+|.|++||+ T Consensus 465 ~l~~~--~~lTP~~~~~~~~s~~~~~~~~~Pv~vG~~v~F~~~r~~~~s~v~e~~~~~~~~~~y~~~dlt~~~~~l~--- 539 (826) T protein:vir:78 465 VVPGG--GIVTPRTAVISITTQYDVDTRAAPAVTGRSVYFAAERALGFMGLHEMAPSPSTDSHYVAEDVTSHIPSYM--- 539 (826) T ss_pred EEeCC--CcccceeEEEEEEEeecccCCCCceEeCCeEEEEecCCCceeEEEEEEeeecccCccchHHHHHHHHHhc--- Confidence 99874 489999999999998775 5799999999999999876 3799999997766 599999999999997 Q ss_pred ccccCCceEEEEEeCCCCeEEEEEcCCCeEEEEEEe---cccceEeEEEeecCCCeEEEEEEEccCCCCEEEEEEEECCC Q lcl|Aclame:pro 320 SSAKGASVRRVAYISDAAKSLWVVLENGQINYCCFD---RTTDTKAWTQLELSGGKVIDIAAAFNPDSDYAYVAVVRSKA 396 (594) Q Consensus 320 ~~~~~~~i~~~a~~~~p~~~~~~~~~dg~~~~~ty~---~eq~v~aW~~w~~~~g~v~~v~~~~~~~~d~~y~~v~r~~~ 396 (594) .++|++||+|++|++++|++++||++++|+|+ +||+|+|||||++ +|+|++||++ +|++|++|+| + T Consensus 540 ----~~~v~~~a~s~~~~~~v~~~~~~g~l~~~ty~~~~~e~~v~aW~~~~~-~g~v~~v~~i----~d~l~~vv~r--~ 608 (826) T protein:vir:78 540 ----PGPAEYIQAAASSGYLVFGTSAADEMICHQYLWQGNEKVQNAYHRWTL-RHQIIGAYFT----GDNLMVLIQK--G 608 (826) T ss_pred ----CCCeEEEEEeCCCCeEEEEEcCCCeEEEEEEEecCCcEEEEeEEEEcc-CCcEEEEEEE----CCeEEEEEEe--C Confidence 46899999999999999999999999999997 7889999999999 7999999998 6899999999 4 Q ss_pred CCcceeEEEEEeccCcccccce-----eeeeeEEccCcc--cc-------cccCCcccCceeEEEEeCCeeccCeEecCC Q lcl|Aclame:pro 397 INGVQKNYTVLEKISSPRTDWK-----RADGWVVAQVNQ--NG-------DVLNLDRYIGRTAVIFSKYGLEAEVEVNNI 462 (594) Q Consensus 397 ~~g~~~~~~~le~~~~~~~~~~-----~~~~~~~~~~~~--~~-------~~~~l~~l~g~tv~i~adg~~~~~~~v~~~ 462 (594) +++...|+. +|+++.....+. ..++........ .+ ...++.|++|+.+.+..++.. ....+..+ T Consensus 609 ~~~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~~ 686 (826) T protein:vir:78 609 QEIALGRMH-LNSLPAREGLQYPKYDYWRRIEATVDGELELTKQHWDLIKDGAAVYQLQPQVGAYMERYQL-GVKRETST 686 (826) T ss_pred CCEEEEEEE-EEecCCCccccccccceeEEEEEEEcceeccccceeEEecCCceeeeeccceeeeccccce-eccccCCC Confidence 677777763 667654432221 111111111111 10 113345667766555555444 33334566 Q ss_pred ceEEEEecCCCCCeEEEeEeeeeEEEecceeeeCCCCcccee-eEEEEEEEEEEEcccceEEeeeecccccccccccccc Q lcl|Aclame:pro 463 GLTHRINGYDPNTVYYVGYKMDSYFRTLTPSNGDMKKSMFGS-KIRISKVQLALFDSIEPTVNGEPADDRSTDDIMDARL 541 (594) Q Consensus 463 ~~tl~~~~~~~~~~v~VG~~y~~~v~~~~~~~~~~~g~~~~~-~~ri~~v~v~l~~S~g~~v~~~~~~~~~~~~~~~~~~ 541 (594) ++++.++++..+++|+||++|+++++|+||++++++|+.+++ |+||+|+++++.+|+.+.++........ ........ T Consensus 687 ~~~l~~~~~~~~~~v~VGl~y~s~~~~~~~~~~~~~g~~~~~~r~~l~r~~~~~~~tg~~~v~v~~~~~~~-~~~~~~~~ 765 (826) T protein:vir:78 687 KVFLDVPEAVVGSVYVVGCEFWSKVEFTPPVLRDHNGLPMTSTRAVLHRYNVNFGWTGEFLWRISDTARPN-QPWYDTTP 765 (826) T ss_pred ceEEEeCCCccccEEEEeeceeEEEEeCceEEecCCCcceeecceEEEEEEEEeeccccEEEEeCCCccCc-ceeeeecc Confidence 788999999999999999999999999999999999998887 8899999999999999988654322111 11111111 Q ss_pred ---c---cCCCccccccCcEEEEeecCCcCcceEEEEEECCCcCEEEEEEEEEEEeccC Q lcl|Aclame:pro 542 ---L---DFSSNSGSSNGTRLVDYNPLGWENDGKMVIAVEQPFLCEVVGVFSVVQSNKV 594 (594) Q Consensus 542 ---~---~~~~~~~~~tg~~~v~~~~~g~~~~~~v~I~~~~P~P~tIlai~~~v~~n~~ 594 (594) . ...+.+ +.++..++++..+|+++.+|+|+|+.|+||+||||.+|...|+= T Consensus 766 ~~~~~~~l~~g~~--~~~t~~v~vp~~~~~~~~~i~i~~d~P~P~tvlai~~~~~y~~r 822 (826) T protein:vir:78 766 LRLSSRQLNAGEP--LVDSAVVPLPARVDMATSKFELSCHSPYDMNVRAVEYNFKSNQT 822 (826) T ss_pred cccccccccCCcc--cccceEEEEeeeccCceEEEEEEeCCCCcEEEEEEeEEEEecce Confidence 1 112333 33444555556789999999999999999999999999999988 No 16 >protein:vir:1543 Length: 801 # NCBI annotation: tail tubular protein B # Family: family:all:825 # MgeID: mge:31 # MgeName: phiYeO3-12 # Cross-refs: genbank:acc:NP_052111;swissprot:trembl:q9t105;genbank:gi:9634037;uniprot:Q9T105;genbank:GeneID:1262408 Probab=100.00 E-value=1.9e-128 Score=720.81 Aligned_cols=560 Identities=13% Similarity=0.070 Sum_probs=423.1 Q ss_pred CCcc--cccccccceecchhcccchHHHHHHHHHhhcCcEEeecCCceecCcceeeeeeeCCCC---CEEEEEEEeCCCc Q lcl|Aclame:pro 1 MADF--SQTSFKGGVIAPRLQFNEYESAYHHSIEDAVNFVVTEQGSLITRCGSEEVGLCQDGEV---RLFRLPAVDAPSN 75 (594) Q Consensus 1 m~~~--~~~~f~~Ge~sp~l~~r~d~~~y~~~~~~~~N~~~~~~G~~~~rpg~~~~~~~~~~~~---~~rlipF~~s~~q 75 (594) ||.| +++||.+| +..|.|++||.++|++|+||++.|+||++|||||+|++.+++++. ..++.+|.++++| T Consensus 1 M~~i~~s~~n~~~G-----vSqq~d~~r~~~q~~~~~N~~~~~~gGl~rRpGt~~va~~~~~~~~~~~~~~~~~~~~~~e 75 (801) T protein:vir:15 1 MALISQSIKNLKGG-----ISQQPDILRFAEQGSVQINGWSSESEGLQKRPPMIHLKTLGPAGYVGAQPYVHLINRDEFE 75 (801) T ss_pred Cceeeeecchhhcc-----eecCcchHhhhhhHhhhhcceeccccCcccCCchheeeeecCCCCcccceeEEEEEeCCce Confidence 9998 68999999 457999999999999999999999999999999999999987543 2455566779999 Q ss_pred eEEEEEeCCeEEEEeCCceEEec--ccccccccceeecccchhhhccceeEecCcEEEEec------------------- Q lcl|Aclame:pro 76 DVIVEVGNTNIAVWVNDVRQVVA--NTPSEWRNTIDRIQTAYDTIGDDAGAANTGRLIMVH------------------- 134 (594) Q Consensus 76 ~y~le~g~~~~r~~~~~~~~~~~--~~~~~~~~~~~~tpyta~~l~~i~~aq~adv~~~v~------------------- 134 (594) .|+|||+++++|+|..+|..... ..++.. ++....+|+++|++|++|++| T Consensus 76 ~y~l~~~~~~irv~~~~G~~~~v~~~~~y~~---------~~~~~~~l~~~~~aD~~fi~nr~~~~~~~~~~~~~~~~~~ 146 (801) T protein:vir:15 76 QYFVVFTGEDIKVFDLDGKEYQVRGDRSYVR---------TANPREDLRMITVADYTFVTNRKVVVQSNDQSVNLPGFKD 146 (801) T ss_pred EEEEEEcCCeEEEEccCCcEEEEecCCcccc---------ccCchhheeEEEEcCEEEEeeCCeeeecccCccccCccCC Confidence 99999999999999877754432 222210 000011122222222222222 Q ss_pred -------------------------------------------------------------------------------- Q lcl|Aclame:pro 135 -------------------------------------------------------------------------------- 134 (594) Q Consensus 135 -------------------------------------------------------------------------------- 134 (594) T Consensus 147 ~~~alv~v~~~~yg~t~~I~i~gs~~~~~t~~~gs~~~~~~~~s~~~ia~~l~~~~~~~~p~~~~~~~~~~w~~~~~~g~ 226 (801) T protein:vir:15 147 QGDALINVRGGQYGRRLSIEFNGAERAAVQLPDGSQPAHVNEVDGQAIAEKLAAQLRNNLGNPNNDQDPNKWRFNVGPGF 226 (801) T ss_pred CCceEEEeeeccCceeEEEEeCCcceEEEEeccCcccchhhhcceeechHHHhhhhhhccCccceeccCccEEEEecCcE Confidence Q ss_pred -------------------------------------------------------------------------------- Q lcl|Aclame:pro 135 -------------------------------------------------------------------------------- 134 (594) Q Consensus 135 -------------------------------------------------------------------------------- 134 (594) T Consensus 227 ~~i~a~~~~~~~~~~t~dg~~~~~~~~~~~~v~~~~~lp~~~~~G~~v~v~~~~~~~~~~y~v~~~~~~~~w~E~a~~g~ 306 (801) T protein:vir:15 227 IHILAPNNDNVWGLQTKDGYADQLINPVTHYTQSFQKLPINAPDGYIVKIVGDTSKTADQYYVRFDLNRKVWVETIGWNT 306 (801) T ss_pred EEEeCCCCcccceeeeccccCceeeeEEeecccceeeeeeecCCCcEEEEEecCCCccceEEEEEEcCCeeEEeeccccc Confidence Q ss_pred -----CCccceeEEeeccCceeecccccceeeeccc--------cCCcceEEEEEeceEEEEeCCCCCcEEEEEeccccc Q lcl|Aclame:pro 135 -----PALQPKRLYRDNNNAWQFVNMHTGAVPAEWS--------PSNYPQTVGIFQNRVWYVGSPVHRTYFWATRAGKLE 201 (594) Q Consensus 135 -----~~~~p~~L~R~~~~~w~~~~~~~~~~p~~~~--------~~g~Ps~v~f~~~RL~~~~~~~~p~~v~~S~~gd~~ 201 (594) .++||+.|+|.++++|++....|..+..+++ .+++|++|+||||||+|++ ||+|||||+|||| T Consensus 307 ~~~~~~~tmp~~lv~~~~~~~~~~~~~w~~r~~gd~~tnp~psf~g~~~~~v~f~q~RL~f~~----~~~v~~Srtgd~~ 382 (801) T protein:vir:15 307 RTHLYYHTMPWALVRASDGNFDFKVLEWGARTVGDDTTNPYPSFTGQTINDIFFFRNRLGFLS----GENIILSRTSKYF 382 (801) T ss_pred ceeeeccccceEEEeeccceEEEeccccccccCCccccCCcccccCCCceEEEEEcceEEEee----CCeEEEEecCCcc Confidence 2347777777777777777777766654443 2345677999999999998 5789999999999 Q ss_pred cccccccC--CCCccEEEEE-cCCccEEE-EEEcCCCEEEEecCcEEEEecCCCcccCcceeEEEeeeecc-cCCcccEE Q lcl|Aclame:pro 202 DIAPSTAN--NPNDPISFVG-IMEGTPCW-IIASSDVLTIGTTINDYQLAASTGVSVTAATAILRRSSVQG-TAAVQGIP 276 (594) Q Consensus 202 nF~~~t~~--~d~d~i~~~~-s~~~~~i~-~~~~~~~L~l~t~~~q~~l~~~~~~~lTP~~~~~~~~s~~g-~~~~~Pv~ 276 (594) ||++++++ .|||||+++. +++.+.|. +++++++|+|||+++||+|+++ ++|||+|++++++|.++ ++.++|+. T Consensus 383 nF~~~t~~~~~DdD~i~~~~~~~~~~~i~~~v~~~~~L~i~t~~~q~~ls~~--~~lTP~~~~~~~~s~~~~~~~~~Pv~ 460 (801) T protein:vir:15 383 NFFPASVSNYSDDDPIDVAVSHNRVSTLKYAVPFSEELLLWSDQAQFVLTAS--GILSSRSVELNLTTQFDVQDRARPHG 460 (801) T ss_pred ccccccccCCCCCccEEEEecCCcceeeEEEeecCCcEEEEecCcEEEEcCC--CcccceeEEEEEEEeeeccCCCCceE Confidence 99999864 6999999955 56667665 5677899999999999999874 48999999999999875 56899999 Q ss_pred eCCeEEEEEcCCCE---EEEEEeeecccceeecchhhhhhhhhcccccccCCceEEEEEeCCCCe-EEEEEcCCCeEEEE Q lcl|Aclame:pro 277 AEEQVIFCSRNKSK---VYAMNYVREQDNWIPDEMSSQAQHLFTPISSAKGASVRRVAYISDAAK-SLWVVLENGQINYC 352 (594) Q Consensus 277 ~g~~v~F~~~~g~~---v~e~~~~~~~d~~~~~dls~~a~hl~~~~~~~~~~~i~~~a~~~~p~~-~~~~~~~dg~~~~~ 352 (594) +|++++|+|++|++ +|++.|++.+|+|+++|+|+|++||+ ++++..+++++.|+. ++|+.++||++++| T Consensus 461 vg~~v~f~~~~g~~~~~~r~~~~~~~~d~y~a~Dlt~~~~hl~-------~~~v~~~~~~~~~~~~~~~~~~~~~~l~~~ 533 (801) T protein:vir:15 461 VGRNVYFASPRASFTSINRYYAVQDVSSVKNAEDMTAHVPNYI-------PNGVFSISGTTAENFAAILTSGAPNRVYIY 533 (801) T ss_pred eCCeEEEEecCCCeeEEEEEEeecccccceehhhHHHHHHHhc-------CCceEEEEEeCCCCcEEEEEEcCCCEEEEE Confidence 99999999999964 46688899999999999999999997 467888888876655 66889999999999 Q ss_pred EEe---cccceEeEEEeecCCCeEEEEEEEccCCCCEEEEEEEECCCCCcceeEEEEEecc-C-cccccceeeeeeEEc- Q lcl|Aclame:pro 353 CFD---RTTDTKAWTQLELSGGKVIDIAAAFNPDSDYAYVAVVRSKAINGVQKNYTVLEKI-S-SPRTDWKRADGWVVA- 426 (594) Q Consensus 353 ty~---~eq~v~aW~~w~~~~g~v~~v~~~~~~~~d~~y~~v~r~~~~~g~~~~~~~le~~-~-~~~~~~~~~~~~~~~- 426 (594) +|+ +||+|+|||||++ +|.++++|+. ..+|++|++|+|.. +...+|+.+.+.. + .......++|+...+ T Consensus 534 ~y~~~~~e~~v~aW~~~~~-~g~~~~~~~~--~~~d~l~~~v~r~~--~~~~~r~~~~~~~~~~~~~~~~~~lD~~~~~~ 608 (801) T protein:vir:15 534 KFLYIDEEIRQQSWSHWDF-GDNVTVFAAQ--VINSTMTVLMGNEH--AVWMGRLHFTKNSIDIPGEPYRLYIDAKRKYT 608 (801) T ss_pred EEecCCCceEEEeeEEEEc-CCCEEEEEEE--ecCCEEEEEEEecC--cEEEEEEEEccccccCCCcceeeeeeeeeeEe Confidence 996 5778999999999 6777777764 35799999999953 3334443221111 1 011122344442211 Q ss_pred --cCc----------ccccccCCcccCceeEEEEeCCeeccCeEecCC---ceEEEEecCCCCCeEEEeEeeeeEEEecc Q lcl|Aclame:pro 427 --QVN----------QNGDVLNLDRYIGRTAVIFSKYGLEAEVEVNNI---GLTHRINGYDPNTVYYVGYKMDSYFRTLT 491 (594) Q Consensus 427 --~~~----------~~~~~~~l~~l~g~tv~i~adg~~~~~~~v~~~---~~tl~~~~~~~~~~v~VG~~y~~~v~~~~ 491 (594) ..+ ....+.+++|++|+++.+++||.......+.++ ..+++++++.++++|+||++|+++++++| T Consensus 609 ~~~~t~~~~~~~~~~~~~~~~gl~~l~g~~v~v~~dG~~~~~~~~~~g~~~~~~~~i~~~~~~~~v~vGl~y~~~~~~~~ 688 (801) T protein:vir:15 609 IPAGTYNDDTYQTSISLATIYGMNFTKGRVSVVFPDGKIIEVDQPINGWSSDPVLRLDGNQEGQVVYIGFNIPFTYTFSK 688 (801) T ss_pred eccceeccCceecccccccccccccccceEEEEEeCCceeeeeeecCcccCcceEEEcCCCCCcEEEEeeeeeEEEEecc Confidence 111 123467899999999999999998887777654 24678889999999999999999999999 Q ss_pred eeeeCCCCcc----ce-eeEEEEEEEEEEEcccceEEeeeeccccccccccccccc---cCCCccccccCcEEEEeecCC Q lcl|Aclame:pro 492 PSNGDMKKSM----FG-SKIRISKVQLALFDSIEPTVNGEPADDRSTDDIMDARLL---DFSSNSGSSNGTRLVDYNPLG 563 (594) Q Consensus 492 ~~~~~~~g~~----~~-~~~ri~~v~v~l~~S~g~~v~~~~~~~~~~~~~~~~~~~---~~~~~~~~~tg~~~v~~~~~g 563 (594) |+++.++|+. +. .|+||+|+++++.+|+.+.+......+.......+.+.. ...+.+++.+|++.+|+ .+ T Consensus 689 ~~~~~~~~~~~~~~~~~~rl~l~r~~~~~~~tg~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tg~~~vp~--~g 766 (801) T protein:vir:15 689 FLIKKTAEDGSTATEDIGRLQLRRAWVNYEDSGAFTIRVNNLSREFIYTMAGARLGSDNLRVGRSNIGTGQYRFPV--VG 766 (801) T ss_pred eEEeccCCCCCceeeeeccEEEEEEEEEeccCcceEEEECCcccccceeecCcccccccccccccccccceEEEEE--ee Confidence 9999666542 22 278999999999999988876654333222112222222 12345677888877764 68 Q ss_pred cCcceEEEEEECCCcCEEEEEEEEEEEeccC Q lcl|Aclame:pro 564 WENDGKMVIAVEQPFLCEVVGVFSVVQSNKV 594 (594) Q Consensus 564 ~~~~~~v~I~~~~P~P~tIlai~~~v~~n~~ 594 (594) |+++.+|+|+|++|+||+||||++|..+|+- T Consensus 767 ~~~~~~v~i~~d~P~P~tvlsi~~e~~y~~r 797 (801) T protein:vir:15 767 NAQTNLVTIESDASTPLNIIGCGWEGNYLRR 797 (801) T ss_pred cCceEEEEEEECCCCcEEEEEEEEEEEEecc Confidence 9999999999999999999999999999999 No 17 >protein:vir:8887 Length: 808 # NCBI annotation: tail tubular protein B # Family: family:all:825 # MgeID: mge:161 # MgeName: gh-1 # Cross-refs: genbank:acc:NP_813776;genbank:gi:29366731;genbank:GeneID:1258831 Probab=100.00 E-value=4.2e-127 Score=713.44 Aligned_cols=557 Identities=13% Similarity=0.045 Sum_probs=430.7 Q ss_pred CCcc--cccccccceecchhcccchHHHHHHHHHhhcCcEEeecCCceecCcceeeeeeeCC---CCCEEEEEEEeCCCc Q lcl|Aclame:pro 1 MADF--SQTSFKGGVIAPRLQFNEYESAYHHSIEDAVNFVVTEQGSLITRCGSEEVGLCQDG---EVRLFRLPAVDAPSN 75 (594) Q Consensus 1 m~~~--~~~~f~~Ge~sp~l~~r~d~~~y~~~~~~~~N~~~~~~G~~~~rpg~~~~~~~~~~---~~~~rlipF~~s~~q 75 (594) |+++ ..+||.+| +..|.|+.||.++|++|+||++.|+||++||||++||++++++ ..+.||.||.+++++ T Consensus 1 M~~v~~s~~n~~~G-----vSqq~d~~R~~~q~~~~~N~~~~~~gG~~rRpgt~~v~~l~~~~~~~~~~~~~~~~~~~~~ 75 (808) T protein:vir:88 1 MGLVSQSVKNLKGG-----ISQQPDILRFSNQGALQINGWSSETQGLQKRPPTTFTKRLQNKGFLGTKPLVHLINRDAQE 75 (808) T ss_pred Ccceeeecchhccc-----eeccchhHhhhhhhhhhhcceeeeccccccCCchheeeeeeccCCCCCCcEEEEEEeCcCc Confidence 9998 68999999 5589999999999999999999999999999999999987664 457899999999999 Q ss_pred eEEEEEeCCeEEEEeCCceEEecccccccccceeeccc--chhhhccceeEecCcEEEEecCCc---------------- Q lcl|Aclame:pro 76 DVIVEVGNTNIAVWVNDVRQVVANTPSEWRNTIDRIQT--AYDTIGDDAGAANTGRLIMVHPAL---------------- 137 (594) Q Consensus 76 ~y~le~g~~~~r~~~~~~~~~~~~~~~~~~~~~~~tpy--ta~~l~~i~~aq~adv~~~v~~~~---------------- 137 (594) .|+++|+++++|+|...+......... || ++..+.+|+++|++|++|++|+.+ T Consensus 76 ~y~v~~~~~~i~v~~~~G~~~~v~~~~---------~y~~~~~~~~~l~~~tvaD~~fi~n~~~~~~~~~~~~~~~~~~~ 146 (808) T protein:vir:88 76 QYFVGFSGTGLAVWDLKGNNYTVRGYN---------GYANCANPRTDLRLITVADYTFVVNRNTVCQMGSTLTHAAYPRL 146 (808) T ss_pred eEEEEEeCCeEEEEEcCCceEEEeecC---------cceEecCChhheeEEEEcCEEEEEcCCcceeecccccccCCCCC Confidence 999999999999998755333221111 11 111233344444444444444444 Q ss_pred -------------------------------------------------------------------------------- Q lcl|Aclame:pro 138 -------------------------------------------------------------------------------- 137 (594) Q Consensus 138 -------------------------------------------------------------------------------- 137 (594) T Consensus 147 ~~~~~~~vr~g~y~~~y~i~i~g~~s~~~~t~t~~~~~~s~~~v~~~~~~~~~~~~~~~~~~~ia~~l~~~~~~~~~~~~ 226 (808) T protein:vir:88 147 DGRAIINVRGGQYGRTLSITINGDGTGSSPQASIKMPNGSAEKVPAGDPYAGMNQVDMTDASWIAAELARQLTVSLGGSG 226 (808) T ss_pred CccEEEEEcccccCceEEEEEecCCcceeeeEeEEEccCcccceeeccceeecccCCccccccchhhheeeeeecccccc Confidence Q ss_pred -------------------------------------------------------------------------------- Q lcl|Aclame:pro 138 -------------------------------------------------------------------------------- 137 (594) Q Consensus 138 -------------------------------------------------------------------------------- 137 (594) T Consensus 227 ~~~~~~~~~~~i~~~a~~~~~~~~t~~g~~~~~~~~~~~~v~~~~~lp~~~p~g~~v~i~~~~~~~~~~~yv~~~~~~~~ 306 (808) T protein:vir:88 227 WSFQAGTGWILINAPANDNVRQIATKDGYADTLLSGFIYQVQTFTKLPANAPPGYLVEITGESARSGDNYWVQYDASGKV 306 (808) T ss_pred eEEEeccceEEEEeccCceeEEEcccCCcCcceeeeeeeeccceeeccccCCCCcEEEEEecCCCCCceeEEEEEcCCeE Confidence Q ss_pred -----------------cceeEEeeccCceeecccccceeeeccc--------cCCcceEEEEEeceEEEEeCCCCCcEE Q lcl|Aclame:pro 138 -----------------QPKRLYRDNNNAWQFVNMHTGAVPAEWS--------PSNYPQTVGIFQNRVWYVGSPVHRTYF 192 (594) Q Consensus 138 -----------------~p~~L~R~~~~~w~~~~~~~~~~p~~~~--------~~g~Ps~v~f~~~RL~~~~~~~~p~~v 192 (594) ||+.|+|.+.++|.+...+|..+..+++ .+++|++|+||||||+|++ |++| T Consensus 307 w~e~~~~~~~~~~~~~tmp~~lv~~~~~~~~~~~~~w~~r~~Gd~~tnp~psf~g~~~~~v~f~q~RL~f~~----~~~v 382 (808) T protein:vir:88 307 WKETAKPKIIAGFNNATLPHALVRAADGQFDWTPLTWDGRNAGDDDTNPMPSFVGATINDVFFFRNRLGFLS----GENV 382 (808) T ss_pred EEEeeeccceeeecccceeEEEEecCCceEEEEecccccccccccccCccceecCCceeEEEEEcceEEEee----CCeE Confidence 4444444444455555544544433322 3346667899999999998 5789 Q ss_pred EEEecccccccccccc--CCCCccEEEEE-cCCccEEE-EEEcCCCEEEEecCcEEEEecCCCcccCcceeEEEeeeecc Q lcl|Aclame:pro 193 WATRAGKLEDIAPSTA--NNPNDPISFVG-IMEGTPCW-IIASSDVLTIGTTINDYQLAASTGVSVTAATAILRRSSVQG 268 (594) Q Consensus 193 ~~S~~gd~~nF~~~t~--~~d~d~i~~~~-s~~~~~i~-~~~~~~~L~l~t~~~q~~l~~~~~~~lTP~~~~~~~~s~~g 268 (594) ||||+||||||+++++ ..|||||+++. +++.+.|. +++++++|+|||+++||+|+++ ++|||+|+.++++|.++ T Consensus 383 ~~Srtgd~~nF~~~t~~~~~DdD~i~~~~~~~~~~~i~~~v~~~~~L~i~T~~~e~~l~~~--~~lTP~~~~~~~~s~~~ 460 (808) T protein:vir:88 383 VMSRTSKYFNFFPSSVATLSDDDPIDVAISHNRISILKYAVPFSEQLLLWSDQAQFVLSSK--TILSSKTIELDLTTEFD 460 (808) T ss_pred EEEeccCcccccCCcccCCCCCccEEEEecCCccceeeEEeecCCcEEEEecCcEEEEeCC--CcccceeEEEEEEEEec Confidence 9999999999999985 46999999955 56667665 5778899999999999999885 48999999999999877 Q ss_pred c-CCcccEEeCCeEEEEEcCCCEE---EEEEeeecccceeecchhhhhhhhhcccccccCCceEEEEEeCCCCeEEEEEc Q lcl|Aclame:pro 269 T-AAVQGIPAEEQVIFCSRNKSKV---YAMNYVREQDNWIPDEMSSQAQHLFTPISSAKGASVRRVAYISDAAKSLWVVL 344 (594) Q Consensus 269 ~-~~~~Pv~~g~~v~F~~~~g~~v---~e~~~~~~~d~~~~~dls~~a~hl~~~~~~~~~~~i~~~a~~~~p~~~~~~~~ 344 (594) + +.++|+.+|++++|++++|+++ |+|.|++++|+|+++|||+|++||+. ++.+..++++++|..++|+++ T Consensus 461 ~~~~~~Pv~vG~~v~f~~~~g~~~~v~r~~~~~~~~d~y~~~dlt~~~~h~~~------~~~~~~~~~~~~~~~~v~~~~ 534 (808) T protein:vir:88 461 VSDGARPYGIGRGVYFAAPRASFTSLKRYYAIQDVSDVKSAEDVSAHVPSYIT------NTVHAIHGSGTENFVSILSDG 534 (808) T ss_pred ccCCCCceEeCCeEEEEecCCCeeEEEEEEEeeeccCceehhhHHHHHHHhcC------CCeEEEEEeCCCCeEEEEEEc Confidence 5 5799999999999999999753 67889999999999999999999985 333455567777888999999 Q ss_pred CCCeEEEEEEe---cccceEeEEEeecCCCeEEEEEEEccCCCCEEEEEEEECCCCCcceeEEEEEeccCcccc------ Q lcl|Aclame:pro 345 ENGQINYCCFD---RTTDTKAWTQLELSGGKVIDIAAAFNPDSDYAYVAVVRSKAINGVQKNYTVLEKISSPRT------ 415 (594) Q Consensus 345 ~dg~~~~~ty~---~eq~v~aW~~w~~~~g~v~~v~~~~~~~~d~~y~~v~r~~~~~g~~~~~~~le~~~~~~~------ 415 (594) +||+|++|+|+ +||+|+|||||++ +|.+..+|...+..+|.+|++|+|... .++||++.... T Consensus 535 ~~g~l~~~~y~~~~~e~~v~aW~r~~~-~g~~~~~~~~~~~~~d~l~~vV~r~~~--------~~ler~~~~~~~~~~~~ 605 (808) T protein:vir:88 535 SPNKVFIYKFLYLDEILQQQSFSHWEF-GDAATTRVLAASCIGSYCYLMIDRPEG--------LCLERMEFTQHTIDYSI 605 (808) T ss_pred CCCEEEEEEEeccCCceeEEeeEEEec-CCCeeEEEEEEeccCCEEEEEEEcCCc--------EEEEEEeeccCCCCCcc Confidence 99999999997 7899999999999 678888888888889999999999533 24666643211 Q ss_pred --cceeeeeeEEccC-ccc-----------ccccCCcccCceeEEEEeCCeeccC-eEecCCceEEEEecCCCCCeEEEe Q lcl|Aclame:pro 416 --DWKRADGWVVAQV-NQN-----------GDVLNLDRYIGRTAVIFSKYGLEAE-VEVNNIGLTHRINGYDPNTVYYVG 480 (594) Q Consensus 416 --~~~~~~~~~~~~~-~~~-----------~~~~~l~~l~g~tv~i~adg~~~~~-~~v~~~~~tl~~~~~~~~~~v~VG 480 (594) ...+.|+.+.... .+. ....++.|++++.+.+.+||..+.. .....++.++.++++.++++|+|| T Consensus 606 ~~~~~~lD~~~~~~~g~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~~~~~~~~~~~~~v~vG 685 (808) T protein:vir:88 606 EPYRTYMDMKKTIVLGAYNIDTNLTSFDVRTAYGGTPGPESTFYTIDQQGVLIEHEARDWATNPYISFVGNRAGEQMVIG 685 (808) T ss_pred ccceeeeeeeeeeccccccCccccceeecccccccccccceeEEEEcCCceEEeeecccccCcceEEeCCCccCceEEEe Confidence 1234444433221 111 1124566888998888889876543 334445567889999999999999 Q ss_pred EeeeeEEEecceeeeCCCCcccee-----eEEEEEEEEEEEcccceEEeeeecccccccccccccc--ccCCCccccccC Q lcl|Aclame:pro 481 YKMDSYFRTLTPSNGDMKKSMFGS-----KIRISKVQLALFDSIEPTVNGEPADDRSTDDIMDARL--LDFSSNSGSSNG 553 (594) Q Consensus 481 ~~y~~~v~~~~~~~~~~~g~~~~~-----~~ri~~v~v~l~~S~g~~v~~~~~~~~~~~~~~~~~~--~~~~~~~~~~tg 553 (594) ++|+++++|+||++++++|+.+++ |+||+|+++++.+|+++.++.+....+........+. ....+.+++.+| T Consensus 686 l~y~s~~~~~p~~~~~~~g~~~~~~~~~gr~~l~r~~~~~~~tg~~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~tg 765 (808) T protein:vir:88 686 KQYTFQYEFSKFLIKQTADDGSTSTEDIGRLQLRRAWLNYEESGAFEINVNNGSSEFVYVMTGGRLGIQRVLGELSVGTG 765 (808) T ss_pred eeeeEEEEecceEEecCCCCcceeecccceEEEEEEEEEeecccceEEEeCCCcccceeeccCcccCcccccCccccccc Confidence 999999999999999999998876 6899999999999999988765332222111212222 234566788899 Q ss_pred cEEEEeecCCcCcceEEEEEECCCcCEEEEEEEEEEEeccC Q lcl|Aclame:pro 554 TRLVDYNPLGWENDGKMVIAVEQPFLCEVVGVFSVVQSNKV 594 (594) Q Consensus 554 ~~~v~~~~~g~~~~~~v~I~~~~P~P~tIlai~~~v~~n~~ 594 (594) ++++|+ .+|+++.+|+|+|++|+||+||||++|..+|+- T Consensus 766 ~~~vp~--~~~~~~~~v~i~~d~P~P~tilsi~~eg~y~~r 804 (808) T protein:vir:88 766 QFKFPV--TGNAVNQRVTITSSNPNPLNVIGCGWEGNYIRR 804 (808) T ss_pred eEEEEe--cccCceeEEEEEECCCCceEEEEEEEEEEEecc Confidence 888775 589999999999999999999999999999999 No 18 >protein:vir:3366 Length: 801 # NCBI annotation: tail tubular protein B # Family: family:all:825 # MgeID: mge:67 # MgeName: T3 # Cross-refs: genbank:acc:NP_523337;swissprot:trembl:q8w5u3;genbank:gi:17570828;goa:Q8W5U3;uniprot:Q8W5U3;genbank:GeneID:927453 Probab=100.00 E-value=8.6e-127 Score=711.72 Aligned_cols=555 Identities=13% Similarity=0.093 Sum_probs=420.6 Q ss_pred CCcc--cccccccceecchhcccchHHHHHHHHHhhcCcEEeecCCceecCcceeeeeeeCCCCCEEEEEE----EeCCC Q lcl|Aclame:pro 1 MADF--SQTSFKGGVIAPRLQFNEYESAYHHSIEDAVNFVVTEQGSLITRCGSEEVGLCQDGEVRLFRLPA----VDAPS 74 (594) Q Consensus 1 m~~~--~~~~f~~Ge~sp~l~~r~d~~~y~~~~~~~~N~~~~~~G~~~~rpg~~~~~~~~~~~~~~rlipF----~~s~~ 74 (594) |+.| ..+||.+| +..|.|++||.++|++|+||++.|+||++||||++|++.++++++ .+++|| .++++ T Consensus 1 M~~i~~~~~nl~~G-----vSqq~d~~r~~~q~~~~~N~~~~~~gG~~rRpGt~~va~~~~~~~-~~~~~~~~~~~r~~~ 74 (801) T protein:vir:33 1 MALISQSIKNLKGG-----ISQQPDILRFTEQGSVQINGWSSESEGIQKRPPMIHLKTLGTAGY-VGAQPYVHLINRDEF 74 (801) T ss_pred CceeEeeccceecc-----eeccchhHhhhhhHhhhhcceeecccCcccCchhHhhhhhcCCCc-cccceEEEEEEeCCc Confidence 9998 57999999 558999999999999999999999999999999999999987533 567777 45899 Q ss_pred ceEEEEEeCCeEEEEeCCceEEecccccccccceeecccchhhhccceeEecCcEEEEec-------------------- Q lcl|Aclame:pro 75 NDVIVEVGNTNIAVWVNDVRQVVANTPSEWRNTIDRIQTAYDTIGDDAGAANTGRLIMVH-------------------- 134 (594) Q Consensus 75 q~y~le~g~~~~r~~~~~~~~~~~~~~~~~~~~~~~tpyta~~l~~i~~aq~adv~~~v~-------------------- 134 (594) |.|+|||+++++|+|..+|.........+... ++....+|+++|++|++|++| T Consensus 75 ~~y~l~~~~~~irv~~~~G~~~~v~~~~~y~~-------~~~~~~~l~~~t~aD~~fi~nr~~~p~~~~~~~~~~~~~~~ 147 (801) T protein:vir:33 75 EQYFVVFTGEDIKVFDLDGKEYQVRGDRSYVR-------TANPREDLRMVTVADYTFVTNRKVVVQSNDQSVNLPGFKDQ 147 (801) T ss_pred eEEEEEEcCCeEEEEccCCcEEEEecCCccee-------ecCcchheEEEEEcCEEEEeeCCeeecccCCcccccccCCC Confidence 99999999999999987765443221110000 000011222222222222222 Q ss_pred -------------------------------------------------------------------------------- Q lcl|Aclame:pro 135 -------------------------------------------------------------------------------- 134 (594) Q Consensus 135 -------------------------------------------------------------------------------- 134 (594) T Consensus 148 ~~~li~v~~~~yg~t~~I~i~gs~~~~~~~~~gs~~~~v~~~s~~~~A~~l~~~~~~~~~~~~~~~~~~~w~~~~~~g~~ 227 (801) T protein:vir:33 148 GDALINVRGGQYGRRLSIEFNGAERAAVQLPDGSQPAHVNEVDGQAIAEKLAAQLRNNLGNPNNDQDPNKWRFNVGPGFI 227 (801) T ss_pred cceEEEEeecccceEEEEEECCcceEEEEeeccccccccccccchhhhhhhhhhhhccCccceeeecCceEEEEecCeEE Confidence Q ss_pred -------------------------------------------------------------------------------- Q lcl|Aclame:pro 135 -------------------------------------------------------------------------------- 134 (594) Q Consensus 135 -------------------------------------------------------------------------------- 134 (594) T Consensus 228 ~i~~p~~~~~~~itt~~g~~~~~~~~~~~~v~~~~~lp~~~~~g~~v~v~~~~~~~~~~y~v~~~~~~~~w~e~~~~g~~ 307 (801) T protein:vir:33 228 HILAPNNDNVWGLQTKDGYADQLINPVTHYTQSFQKLPINAPDGYIVKIVGDTSKTADQYYVRFDLNRKVWVETIGWNTR 307 (801) T ss_pred EEecCCCcccccccccCCccceeEEEEeecccceeeeeeecCCCcEEEEEecCCCcccceEEEEEcCCcEEEEeeccccc Confidence Q ss_pred ----CCccceeEEeeccCceeecccccceeeeccc--------cCCcceEEEEEeceEEEEeCCCCCcEEEEEecccccc Q lcl|Aclame:pro 135 ----PALQPKRLYRDNNNAWQFVNMHTGAVPAEWS--------PSNYPQTVGIFQNRVWYVGSPVHRTYFWATRAGKLED 202 (594) Q Consensus 135 ----~~~~p~~L~R~~~~~w~~~~~~~~~~p~~~~--------~~g~Ps~v~f~~~RL~~~~~~~~p~~v~~S~~gd~~n 202 (594) .+++|+.|+|.++++|++....|..+...++ .+++|++|+||||||+|++ ||+|||||+||||| T Consensus 308 ~~~~~~tmp~~l~~~~~~tf~~~~~~w~~r~~gd~~tnp~psf~g~~~~~v~f~q~RL~f~~----~~~v~~Srtgd~~n 383 (801) T protein:vir:33 308 THLHYHTMPWALVRASDGNFDFKYLEWGARTVGDDTTNPYPSFTGQTINDIFFFRNRLGFLS----GENIILSRTSKYFN 383 (801) T ss_pred eeeeecccceEEEEccCceEEecccCccccccCCccccCcccccCCCceEEEEEcceEEEee----CCeEEEEecCCccc Confidence 3446666666666666666666665433222 3456778999999999998 57899999999999 Q ss_pred cccccc--CCCCccEEEEE-cCCccEEE-EEEcCCCEEEEecCcEEEEecCCCcccCcceeEEEeeeeccc-CCcccEEe Q lcl|Aclame:pro 203 IAPSTA--NNPNDPISFVG-IMEGTPCW-IIASSDVLTIGTTINDYQLAASTGVSVTAATAILRRSSVQGT-AAVQGIPA 277 (594) Q Consensus 203 F~~~t~--~~d~d~i~~~~-s~~~~~i~-~~~~~~~L~l~t~~~q~~l~~~~~~~lTP~~~~~~~~s~~g~-~~~~Pv~~ 277 (594) |+++++ ..|||||+++. +++.+.|. +++++++|+|||+++||+|+++ ++|||+|++++++|.+++ +.++|+.+ T Consensus 384 F~~~t~~~~~DdD~i~~~~~~~~~~~i~~~v~~~~~L~l~t~~~q~~l~~~--~~lTP~~~~~~~~s~~~~~~~~~Pv~v 461 (801) T protein:vir:33 384 FFPASVSNYSDDDPIDVAVSHDRVSTLKYAVPFSEELLLWSDQAQFVLTAS--DILSSRSVGLNLTTQFDVQDRARPHGV 461 (801) T ss_pred cccccccCCCCCccEEEEecCCcceeeeEEeecCCcEEEEecCcEEEEeCC--CcccceeEEEEEEEeecccCCCCceEe Confidence 999986 46999999955 56667665 5777899999999999999874 489999999999998775 57999999 Q ss_pred CCeEEEEEcCCCE---EEEEEeeecccceeecchhhhhhhhhcccccccCCceEEEEEeCCCCeEE-EEEcCCCeEEEEE Q lcl|Aclame:pro 278 EEQVIFCSRNKSK---VYAMNYVREQDNWIPDEMSSQAQHLFTPISSAKGASVRRVAYISDAAKSL-WVVLENGQINYCC 353 (594) Q Consensus 278 g~~v~F~~~~g~~---v~e~~~~~~~d~~~~~dls~~a~hl~~~~~~~~~~~i~~~a~~~~p~~~~-~~~~~dg~~~~~t 353 (594) |++++|+|++|++ +|++.|++.+|+|+++|+|+|++||+ ++++..|+++++|+.++ |+..+++++++|+ T Consensus 462 g~~v~f~~~~g~~~~v~r~~~~~~~~d~y~~~Dlt~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 534 (801) T protein:vir:33 462 GRNVYFSSPRASFTSINRYYAVQDVSSVKNAEDMTAHVPNYI-------PNGVFSISGTTAENFVAILTSGAPNRVYIYK 534 (801) T ss_pred cCeEEEEecCCCeeEEEEEEeecccccceehhhHHHHHHHhc-------CCceEEEEEcCCCCeEEEEEecCCCEEEEEE Confidence 9999999999964 36678899999999999999999997 46889999999888865 5666889999999 Q ss_pred Ee---cccceEeEEEeecCCCeEEEEEEEccCCCCEEEEEEEECCCCCcceeEEEEEeccC-------cc-cccceeeee Q lcl|Aclame:pro 354 FD---RTTDTKAWTQLELSGGKVIDIAAAFNPDSDYAYVAVVRSKAINGVQKNYTVLEKIS-------SP-RTDWKRADG 422 (594) Q Consensus 354 y~---~eq~v~aW~~w~~~~g~v~~v~~~~~~~~d~~y~~v~r~~~~~g~~~~~~~le~~~-------~~-~~~~~~~~~ 422 (594) |+ +||+|+|||||++ +|.++.+|+ +..+|++|++|+|... . ++|+++ .. .....++|+ T Consensus 535 y~~~~~e~~v~aW~~~~~-~g~~~~~~~--~~~~d~l~~vv~r~~~--~------~le~~~~~~~~~d~~~~~~~~~lD~ 603 (801) T protein:vir:33 535 FLYIDEEIRQQSWSHWDF-GDNVTVFAA--QVINSTMTVLMSNEHA--V------WMGRLHFTKDSIDLPGEPYRLYIDA 603 (801) T ss_pred EecCCCceEEEeeEEEEc-CCCEEEEEE--ecCCCEEEEEEEcCCc--E------EEEEEEEeeccccCCCccceEEeec Confidence 86 5778899999999 677777774 4568999999999532 1 234432 11 111223333 Q ss_pred e---EEccCccc-----c-----cccCCcccCceeEEEEeCCeec---cCeEecCCceEEEEecCCCCCeEEEeEeeeeE Q lcl|Aclame:pro 423 W---VVAQVNQN-----G-----DVLNLDRYIGRTAVIFSKYGLE---AEVEVNNIGLTHRINGYDPNTVYYVGYKMDSY 486 (594) Q Consensus 423 ~---~~~~~~~~-----~-----~~~~l~~l~g~tv~i~adg~~~---~~~~v~~~~~tl~~~~~~~~~~v~VG~~y~~~ 486 (594) . ......+. . .+.+++|++|+++.+++||.+. ....+..++.+++++++.++++|+||++|+++ T Consensus 604 ~~~~~~~~~~~~~~~~~t~~~~~~~~gl~~~eg~~v~~~~dG~v~~~~~~~~~~~~~~~l~i~~~~~~~~v~vGl~y~s~ 683 (801) T protein:vir:33 604 KRKYTIPAGTYNDDTYQTSISLSTIYGMNFTKGRVSVVFPDGKIVEIDQPINGWSSDPMLRLDGNQEGQVVYIGFNIPFT 683 (801) T ss_pred ceEEEecccceecCccccccccccccCCccccceEEEEEeCCceEeeeeccccccCceeEEecCCCCCCEEEEeeeeeEE Confidence 1 11122221 1 2348999999999999999764 33445567788999999999999999999999 Q ss_pred EEecceeeeCCCCc----ccee-eEEEEEEEEEEEcccceEEeeeeccccccccccccccc---cCCCccccccCcEEEE Q lcl|Aclame:pro 487 FRTLTPSNGDMKKS----MFGS-KIRISKVQLALFDSIEPTVNGEPADDRSTDDIMDARLL---DFSSNSGSSNGTRLVD 558 (594) Q Consensus 487 v~~~~~~~~~~~g~----~~~~-~~ri~~v~v~l~~S~g~~v~~~~~~~~~~~~~~~~~~~---~~~~~~~~~tg~~~v~ 558 (594) ++|+||+++.++|+ .+.+ |+||+|+++++.+|+++.++.+...+.......+.+.+ ...+.+++.+|++.++ T Consensus 684 ~~~~~~~~~~~~~~~~~~~~~~~r~~l~r~~~~~~~tg~~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tg~~~vp 763 (801) T protein:vir:33 684 YTFSKFLIKKTAEDGSTATEDIGRLQLRRAWVNYEDSGAFIIRVNNLSREFIYTMAGARLGSDNLRVGGSNIGTGQYRFP 763 (801) T ss_pred EEeCceEEeccCCCCceeeeeeccEEEEEEEEEeecCcceEEEECCcccceeeeecccccccccccccccccccceEEEE Confidence 99999999966553 3333 78999999999999999887654433222111222221 2335567788887776 Q ss_pred eecCCcCcceEEEEEECCCcCEEEEEEEEEEEeccC Q lcl|Aclame:pro 559 YNPLGWENDGKMVIAVEQPFLCEVVGVFSVVQSNKV 594 (594) Q Consensus 559 ~~~~g~~~~~~v~I~~~~P~P~tIlai~~~v~~n~~ 594 (594) + .+|+++.+|+|+|++|+||+||||++|..+|+- T Consensus 764 ~--~g~~~~~~v~i~~d~P~P~tvl~i~~eg~y~~r 797 (801) T protein:vir:33 764 V--VGNAQTNTVTIESDASTPLNIIGCGWEGNYLRR 797 (801) T ss_pred e--eccCceEEEEEEeCCCCCEEEEEEEEEEEEecc Confidence 4 689999999999999999999999999999999 No 19 >protein:vir:97014 Length: 800 # NCBI annotation: 33 # Family: family:all:825 # MgeID: mge:1644 # MgeName: K1-5 # Cross-refs: genbank:acc:YP_654134;genbank:gi:108862018;genbank:GeneID:5075963 Probab=100.00 E-value=2.2e-125 Score=704.02 Aligned_cols=555 Identities=12% Similarity=0.049 Sum_probs=426.3 Q ss_pred CCc-ccccccccceecchhcccchHHHHHHHHHhhcCcEEeecCCceecCcceeeeeeeCCCCCEEEEEEEeC---CCce Q lcl|Aclame:pro 1 MAD-FSQTSFKGGVIAPRLQFNEYESAYHHSIEDAVNFVVTEQGSLITRCGSEEVGLCQDGEVRLFRLPAVDA---PSND 76 (594) Q Consensus 1 m~~-~~~~~f~~Ge~sp~l~~r~d~~~y~~~~~~~~N~~~~~~G~~~~rpg~~~~~~~~~~~~~~rlipF~~s---~~q~ 76 (594) |.= =.-+||.+| +..|.|++||.++|++|+||++.|+||++||||++||+.++++.+.++|+||.++ ++|+ T Consensus 1 ~~v~~s~~n~~~G-----vSqq~d~~R~~~q~~~~~N~~~~~~gGl~rRpGt~fva~l~~~~~~~~~~~~~~~~d~~eq~ 75 (800) T protein:vir:97 1 MEVQGSLGRQIQG-----ISQQPPAVRLDGQCTAMVNMIPDVVNGTQSRMGTTHIAKILDAGTDDMATHHYRRGDGDEEY 75 (800) T ss_pred CeeEeechhhhcc-----cccCchhHhhhhhhhhhhcceeccccccccCCchhhheeecCCCcccceeEEEEEcCCceEE Confidence 763 267899999 5689999999999999999999999999999999999999999999999999884 6799 Q ss_pred EEEEEeCCeEEEEeCCceEEecccccccccceeecccchhhhccceeEecCcEEEEecCCccceeEEee--cc------- Q lcl|Aclame:pro 77 VIVEVGNTNIAVWVNDVRQVVANTPSEWRNTIDRIQTAYDTIGDDAGAANTGRLIMVHPALQPKRLYRD--NN------- 147 (594) Q Consensus 77 y~le~g~~~~r~~~~~~~~~~~~~~~~~~~~~~~tpyta~~l~~i~~aq~adv~~~v~~~~~p~~L~R~--~~------- 147 (594) |++||+++++|+|..+|.......... +....++++..+.+|+++|++|++|++|+.++|+...+. .+ T Consensus 76 ~v~~~~~~~~rv~~~~G~~~~v~~~~~---~~~y~~~~~~~~~~l~~~tvaD~~fi~n~~~~~~~~~~~~~~~~~~~~~~ 152 (800) T protein:vir:97 76 FFTLKKGQVPEIFDKYGRKCNVTSQDA---PMTYLSEVVNPREDVQFMTIADVTFMLNRRKVVKASSRKSPKVGNKAIVF 152 (800) T ss_pred EEEEEcCCEEEEEecCCcEEEEecCCc---ceEEEeccCCCccceeEEEEcCEEEEeeCceecccccccccCCCcceEEE Confidence 999999999999998887654332221 112234566778889999999999999988777532210 00 Q ss_pred -------------------------------------------------------Cceeec------------------- Q lcl|Aclame:pro 148 -------------------------------------------------------NAWQFV------------------- 153 (594) Q Consensus 148 -------------------------------------------------------~~w~~~------------------- 153 (594) ..|++. T Consensus 153 v~~g~y~~~y~i~I~~~~~~~~~t~~~t~~~~~~~~~~~~ia~ql~~~~~~~~~~~~~t~~~~G~~~~i~~~~~~~~~v~ 232 (800) T protein:vir:97 153 CAYGQYGTSYSIVINGANAASFKTPDGGSADHVEQIRTERITSELYSKLQQWSGVSDYEIQRDGTSIFIERRDGASFTIT 232 (800) T ss_pred EeecccceeeeeccCCcceEEEEEcCCCCcccceeccHHHHHHHHHHhhhccccccceEEEeCCcEEEEEEcCCceEEEE Confidence 001110 Q ss_pred -------------------------------------------------------------------------------- Q lcl|Aclame:pro 154 -------------------------------------------------------------------------------- 153 (594) Q Consensus 154 -------------------------------------------------------------------------------- 153 (594) T Consensus 233 t~~g~~~~~~~~~~~~v~~~~~lp~~~~~g~~v~i~~~~~~~~~~y~~~~~~~~~~~~~w~e~~~~~~~~~~~~~tmp~~ 312 (800) T protein:vir:97 233 TTDGAKGKDLVAIKNKVSSTDLLPSRAPAGYKVQVWPTGSKPESRYWLQAEPKEGNLVSWKETIAADVLLGFDKGTMPYI 312 (800) T ss_pred ecCCcCceeeeEEeeeccchhhchhhCCCCcEEEEEccCCCCCceEEEEEEecccCcceEEEeeccccccceecccceEE Confidence Q ss_pred ----------------ccccceeeec------------cccCCcceEEEEEeceEEEEeCCCCCcEEEEEeccccccccc Q lcl|Aclame:pro 154 ----------------NMHTGAVPAE------------WSPSNYPQTVGIFQNRVWYVGSPVHRTYFWATRAGKLEDIAP 205 (594) Q Consensus 154 ----------------~~~~~~~p~~------------~~~~g~Ps~v~f~~~RL~~~~~~~~p~~v~~S~~gd~~nF~~ 205 (594) +.+|..+... ++..+||++|+||||||+|++ |++|||||+||||||++ T Consensus 313 ~~~~~~~~~~g~~~~~~~~w~~r~~gd~~tnp~p~f~~~~~~~~~~~v~f~q~RL~f~~----~~~v~~Srtgd~~nF~~ 388 (800) T protein:vir:97 313 IERTDIINGIAQFKIRQGDWEDRKVGDDLTNPMPSFIDEEVPQTIGGMFMVQNRLCFTA----GEAVIASRTSYFFDFFR 388 (800) T ss_pred EEEeecccccceeEEEeccccccccCccccCccccccCCcCCCCceeEEEEeeeEEEec----CCeEEEEecCCcccccc Confidence 0000000000 001157999999999999998 57899999999999999 Q ss_pred cccC--CCCccEEEEE-cCCccEEE-EEEcCCCEEEEecCcEEEEecCCCcccCcceeEEEeeeec-ccCCcccEEeCCe Q lcl|Aclame:pro 206 STAN--NPNDPISFVG-IMEGTPCW-IIASSDVLTIGTTINDYQLAASTGVSVTAATAILRRSSVQ-GTAAVQGIPAEEQ 280 (594) Q Consensus 206 ~t~~--~d~d~i~~~~-s~~~~~i~-~~~~~~~L~l~t~~~q~~l~~~~~~~lTP~~~~~~~~s~~-g~~~~~Pv~~g~~ 280 (594) +++. .|||||+++. +++.+.|. +++++++|+|||+++||+|+++ ++|||+|+.++++|.+ +++.++|+.+|++ T Consensus 389 ~t~~~~~DdD~I~~~~ss~~v~~i~~~v~~~~~L~i~T~~~q~~ls~~--~~lTP~~~~~~~~s~~~~~~~~~Pv~vG~~ 466 (800) T protein:vir:97 389 YTVISALATDPFDIFSDASEVYQLKHAVTLDGATVLFSDKSQFILPGD--KPLEKSNALLKPVTTFEVNNKVKPVVTGES 466 (800) T ss_pred ccccCCCCCccEEEEecCCcceeeeEEeecCCcEEEEecCcEEEEeCC--CcccceeEEEEEEEeeeccCCCCcEEeCCe Confidence 9864 5999999955 55667665 5677889999999999999885 4899999999999976 5578999999999 Q ss_pred EEEEEcCCC--EEEEEEeeecccceeecchhhhhhhhhcccccccCCceEEEEEeCCCCe-EEEEEcCCCeEEEEEEe-- Q lcl|Aclame:pro 281 VIFCSRNKS--KVYAMNYVREQDNWIPDEMSSQAQHLFTPISSAKGASVRRVAYISDAAK-SLWVVLENGQINYCCFD-- 355 (594) Q Consensus 281 v~F~~~~g~--~v~e~~~~~~~d~~~~~dls~~a~hl~~~~~~~~~~~i~~~a~~~~p~~-~~~~~~~dg~~~~~ty~-- 355 (594) ++|++++|+ +||||.|++++|+|.++|+|+|++||+ ++++..|+++++|+. ++|+.+++|++++|+|+ T Consensus 467 v~fv~~~g~~s~vre~~~~~~~d~~~a~DlT~~~~hl~-------~~~v~~~~~~~~~~~~v~~~~~~~~~l~~~~y~~~ 539 (800) T protein:vir:97 467 VMFATNDGSYSGVREFYTDSYSDTKKAQAITSHVNKLI-------EGNITNMAASTNVNRLLVTTDKYRNIIYCYDWLWQ 539 (800) T ss_pred EEEeeCCCCeeEEEEEeeeecccceehhhHHHHHHHhc-------CCceEEEEEeCCCCeEEEEEEcCCCEEEEEEEeec Confidence 999999985 699999999999999999999999997 468899999888776 56888899999999997 Q ss_pred -cccceEeEEEeecCCCeEEEEEEEccCCCCEEEEEEEECCCCCcceeEEEEEeccCcccc------cceeee------- Q lcl|Aclame:pro 356 -RTTDTKAWTQLELSGGKVIDIAAAFNPDSDYAYVAVVRSKAINGVQKNYTVLEKISSPRT------DWKRAD------- 421 (594) Q Consensus 356 -~eq~v~aW~~w~~~~g~v~~v~~~~~~~~d~~y~~v~r~~~~~g~~~~~~~le~~~~~~~------~~~~~~------- 421 (594) +||+|+|||||+++++.+..||.. .+|++|++|+|... .+||||+.... +..+.| T Consensus 540 ~~e~~~~aW~~~~~~~~~~~~~~~~---~~d~l~~vv~r~~~--------~~ler~~~~~~~~~~~~~~~~lD~~~~~~~ 608 (800) T protein:vir:97 540 GTDRVQSAWHVWKWPIGTKVRGMFY---SGELLYLLLERGDG--------VYLEKMDMGDALTYGLNDRIRMDRQAELVF 608 (800) T ss_pred CCceEEEeEEEEecCCCeEEEEEEE---cCCeEEEEEEcCCc--------EEEEEEecccCcCcccccceeccccceeee Confidence 478899999999976665555544 36899999999532 24788763211 111111 Q ss_pred -------eeEEccCcc---------cccccCCcccCceeEEEEeCCeeccCeEecCCceEEEEecCCCCCeEEEeEeeee Q lcl|Aclame:pro 422 -------GWVVAQVNQ---------NGDVLNLDRYIGRTAVIFSKYGLEAEVEVNNIGLTHRINGYDPNTVYYVGYKMDS 485 (594) Q Consensus 422 -------~~~~~~~~~---------~~~~~~l~~l~g~tv~i~adg~~~~~~~v~~~~~tl~~~~~~~~~~v~VG~~y~~ 485 (594) .++++...+ ...+.+++|++|++|.+. ++.......+.. +.+.+++++++|+||++|++ T Consensus 609 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~v~g~~~~~G~~v~~~-~~~~~~~~~~~~----~~~~~~~~~~~v~vGl~Y~~ 683 (800) T protein:vir:97 609 KHFKAEDEWVSEPLPWVPTNPELLDCILIEGWDSYIGGSFLFK-YNPSDNTLSTTF----DMYDDSHVKAKVIVGQIYPQ 683 (800) T ss_pred eeeecccceEeccccccCCCcceeEEEEecccccccCceEEEE-ecCccCcccccc----eEEeCCCCCcEEEEeeeeeE Confidence 123333222 224578999999998654 443333333332 35677889999999999999 Q ss_pred EEEecceeeeCCCCcccee-eEEEEEEEEEEEcccceEEeeeecccc--cccccccccc---ccCCCccccccCcEEEEe Q lcl|Aclame:pro 486 YFRTLTPSNGDMKKSMFGS-KIRISKVQLALFDSIEPTVNGEPADDR--STDDIMDARL---LDFSSNSGSSNGTRLVDY 559 (594) Q Consensus 486 ~v~~~~~~~~~~~g~~~~~-~~ri~~v~v~l~~S~g~~v~~~~~~~~--~~~~~~~~~~---~~~~~~~~~~tg~~~v~~ 559 (594) +++|+||++++++|..+.. |+||+|+++++.+|+++.+........ ......+.+. ....+.+++.+|++++|+ T Consensus 684 ~~~~~p~~i~~~~g~~~~~~r~~i~r~~~~~~~sg~~~~~v~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~tg~~~vp~ 763 (800) T protein:vir:97 684 EFEPTPVVIRDNQDRVSYIDVPVVGLVHLNLDMYPDFSVEVKNVKSGKVRRVLASNRIGGALNNTVGYVEPREGVFRFPL 763 (800) T ss_pred EEEecceEEEecCCCceeecceEEEEEEEeecccccEEEEEccccCCceeeeecCccccccccccCCccccccceEEEEe Confidence 9999999999988877654 889999999999999998855432221 1111222222 233455678899988875 Q ss_pred ecCCcCcceEEEEEECCCcCEEEEEEEEEEEeccC Q lcl|Aclame:pro 560 NPLGWENDGKMVIAVEQPFLCEVVGVFSVVQSNKV 594 (594) Q Consensus 560 ~~~g~~~~~~v~I~~~~P~P~tIlai~~~v~~n~~ 594 (594) .+|+++.+|+|+|++|+||+||||++|..+|+- T Consensus 764 --~g~~~~~~v~i~~d~PlP~tvlsi~~eg~y~~r 796 (800) T protein:vir:97 764 --RAKSTDVVYRIIVESPHTFQLRDIEWEGSYNPT 796 (800) T ss_pred --ecccceeEEEEEECCCCcEEEEEEEEEEEeecc Confidence 589999999999999999999999999999999 No 20 >protein:vir:7021 Length: 803 # NCBI annotation: tail protein # Family: family:all:825 # MgeID: mge:141 # MgeName: SP6 # Cross-refs: genbank:acc:NP_853594;genbank:gi:31711676;genbank:GeneID:1481802 Probab=100.00 E-value=7.6e-123 Score=690.09 Aligned_cols=559 Identities=11% Similarity=0.016 Sum_probs=418.0 Q ss_pred CCc-ccccccccceecchhcccchHHHHHHHHHhhcCcEEeecCCceecCcceeeeeeeCCCCCEEEEEEEe----CCCc Q lcl|Aclame:pro 1 MAD-FSQTSFKGGVIAPRLQFNEYESAYHHSIEDAVNFVVTEQGSLITRCGSEEVGLCQDGEVRLFRLPAVD----APSN 75 (594) Q Consensus 1 m~~-~~~~~f~~Ge~sp~l~~r~d~~~y~~~~~~~~N~~~~~~G~~~~rpg~~~~~~~~~~~~~~rlipF~~----s~~q 75 (594) |.= =.-+||.+| +..+.|++||.++|++|+||++.|+||++||||++||++++++.+..+|+|+.+ +++| T Consensus 1 ~~v~~s~~nl~~G-----vSqQ~d~~R~~~q~~~~~N~~~~~~gGl~rRpGt~~va~l~~~~~~~~~~~~~~~~~~~~e~ 75 (803) T protein:vir:70 1 MEVQGSLGRQIQG-----ISQQPPAVRLDGQCSEMVNMVPDVVEGTKSRMGTTHIAKLLEYGEDDMAVHHYRRGGEGEEE 75 (803) T ss_pred CeEEeecchhccc-----cccCchHHhhhhhhhhhhcceeeeccccccCChhhhhhhhcCCCcccceeeEEEecCCCceE Confidence 652 256788888 667889999999999999999999999999999999999999999999999654 5679 Q ss_pred eEEEEEeCCeEEEEeCCceEEecccccccccceeecccchhhhccceeEecCcEEEEecCCccceeE------------- Q lcl|Aclame:pro 76 DVIVEVGNTNIAVWVNDVRQVVANTPSEWRNTIDRIQTAYDTIGDDAGAANTGRLIMVHPALQPKRL------------- 142 (594) Q Consensus 76 ~y~le~g~~~~r~~~~~~~~~~~~~~~~~~~~~~~tpyta~~l~~i~~aq~adv~~~v~~~~~p~~L------------- 142 (594) +|++||+++++|+|..++..+........ ....++++..+.+|+++|++|++|++|+.++|+.. T Consensus 76 ~~~~~~~~~~irv~~~~G~~~~v~~~~~~---~~~l~~~~~~~~~l~~~tvaD~~fi~n~~~~~~~~~~~~~~~~~~~~~ 152 (803) T protein:vir:70 76 YFFIMKKGQVPEIFDKQGRKCMVQSQDAP---MTYLSEVTNPREDVQFMTIADVTFMLNRKKIVKARPERSPQVGSTAIV 152 (803) T ss_pred EEEEEecCCeEEEEEcCCcEEEEecCCce---eEEEeecCCChhheeEEEEcCEEEEecCceeeeeccccCCCCCCceEE Confidence 99999999999999866654433222211 12245566667778999999999999988877410 Q ss_pred -Eee--------------------------------------------------ccCceee------------------- Q lcl|Aclame:pro 143 -YRD--------------------------------------------------NNNAWQF------------------- 152 (594) Q Consensus 143 -~R~--------------------------------------------------~~~~w~~------------------- 152 (594) +|. +...|++ T Consensus 153 ~vr~g~y~~~y~itIng~~~a~~~t~~~~~~~~~~~~~~~~ia~~l~~~~~~~~s~a~~~~~~~g~~~~i~~~~~~~~~~ 232 (803) T protein:vir:70 153 FMAYGQYGTHYKIIIDGVVAAGYKTRDGAEAHHIEDIRTESIAYNLYQSLQSWDKIADYEIQLDGTSIYITRRDGSTTFD 232 (803) T ss_pred EEeecCCcceEEEEeCCcceEEEEeCCCcccccccccchhhhhhhhhhheeccccccceEEEECCcEEEEEEcCCCCeeE Confidence 000 0001111 Q ss_pred -------------------------------------------------------------------------------- Q lcl|Aclame:pro 153 -------------------------------------------------------------------------------- 152 (594) Q Consensus 153 -------------------------------------------------------------------------------- 152 (594) T Consensus 233 ~~t~~g~~~~~~~~~~~~v~~~~~Lp~~~~~g~~v~v~~~g~~~~d~y~v~~~~~~~~~~~w~e~a~~g~~~~~~~~t~p 312 (803) T protein:vir:70 233 ITTEDGAKGKDLVAIKYKVASTDLLPSRAPEGYKVQVWPTGSKPESRYWLQAEKQNGNIVSWKETLAADVLIGFDKSTMP 312 (803) T ss_pred EEeecCcCCcEEEEEEecccceeeccccCCCCceEEEEcCCCCCCceeeEEEEeccCCccceEeeeccceeeeeeccccc Confidence Q ss_pred -----------------cccccceeeec------------cccCCcceEEEEEeceEEEEeCCCCCcEEEEEeccccccc Q lcl|Aclame:pro 153 -----------------VNMHTGAVPAE------------WSPSNYPQTVGIFQNRVWYVGSPVHRTYFWATRAGKLEDI 203 (594) Q Consensus 153 -----------------~~~~~~~~p~~------------~~~~g~Ps~v~f~~~RL~~~~~~~~p~~v~~S~~gd~~nF 203 (594) .+..|..+..+ +..++||++|+||||||+|++ |++|||||+|||||| T Consensus 313 ~~~v~~~~~~~~~~~~~~~~~~~~r~~gdd~tnp~psf~~~~~~~~~~~v~f~q~RL~f~~----~~~v~~Srtgd~~nF 388 (803) T protein:vir:70 313 YIIERTGFVNGIAQFKIRQGDWEDRKVGDDLTNPMPSFIDEEVPQTLGGMFMVQNRLCVTA----GEAVIATRTSYFFDF 388 (803) T ss_pred EEEEEEEEeecceeEEEEeeccccccccccccCccccccCccCCCCceeEEEEeceEEEee----CCeEEEEccCCcccc Confidence 00000000000 112357999999999999998 578999999999999 Q ss_pred cccccC--CCCccEEEEE-cCCccEEE-EEEcCCCEEEEecCcEEEEecCCCcccCcceeEEEeeeecc-cCCcccEEeC Q lcl|Aclame:pro 204 APSTAN--NPNDPISFVG-IMEGTPCW-IIASSDVLTIGTTINDYQLAASTGVSVTAATAILRRSSVQG-TAAVQGIPAE 278 (594) Q Consensus 204 ~~~t~~--~d~d~i~~~~-s~~~~~i~-~~~~~~~L~l~t~~~q~~l~~~~~~~lTP~~~~~~~~s~~g-~~~~~Pv~~g 278 (594) ++++++ .|||||+++. +++.+.|. +++++++|+|||+++||+|+++ ++|||+|+.++++|.++ ++.++|+.+| T Consensus 389 ~~~t~~~~~DdD~I~~~~ss~~~~~i~~~v~~~~~L~i~T~~~q~~l~g~--~~lTP~~~~i~~~s~~~~~~~~~Pv~vg 466 (803) T protein:vir:70 389 FRYTAVSAVATDPFDVFSDASEVYQLKHAVTLDGSTVLFADKSQFILPGD--KPLEKSNVLLKPVTTFEVNNNVKPVATG 466 (803) T ss_pred ccccccCCCCCccEEEEecCCcceeeEEEeecCCcEEEEecCcEEEEeCC--CcccceeEEEEEEEEeeccCCCccEEeC Confidence 999854 6999999955 56667665 5777899999999999999885 48999999999999875 5689999999 Q ss_pred CeEEEEEcCCC--EEEEEEeeecccceeecchhhhhhhhhcccccccCCceEEEEEeCCCCeEEEEE-cCCCeEEEEEEe Q lcl|Aclame:pro 279 EQVIFCSRNKS--KVYAMNYVREQDNWIPDEMSSQAQHLFTPISSAKGASVRRVAYISDAAKSLWVV-LENGQINYCCFD 355 (594) Q Consensus 279 ~~v~F~~~~g~--~v~e~~~~~~~d~~~~~dls~~a~hl~~~~~~~~~~~i~~~a~~~~p~~~~~~~-~~dg~~~~~ty~ 355 (594) ++++|++++|+ +||||.|++++|+|+++|+|++++||+ +++|..|+++++|+.++|++ .+++++++|+|+ T Consensus 467 ~~v~fv~~~g~~s~vre~~~~~~~d~y~a~Dlt~~a~hl~-------~~~v~~~~~~~~~~~~v~~~~~~~~~l~~~~yl 539 (803) T protein:vir:70 467 ESVMFATSEGAYSGIREFYTDSYSDTKKAQAITSHVNKLL-------EGNVIMMSASTNVNRLLVLTDKYRNIIYCYDWL 539 (803) T ss_pred CeEEEeccCCCeeEEEEEeccccccceehhhhhhhhHhhc-------CCceEEEEEeCCCCeEEEEEEcCCCeEEEEEEE Confidence 99999999985 699999999999999999999999997 46899999999999877666 566778888886 Q ss_pred ---cccceEeEEEeecCCCeEEEEEEEccCCCCEEEEEEEECCCCCcceeEEEEEeccCcccccc--eeeeeeEEccCcc Q lcl|Aclame:pro 356 ---RTTDTKAWTQLELSGGKVIDIAAAFNPDSDYAYVAVVRSKAINGVQKNYTVLEKISSPRTDW--KRADGWVVAQVNQ 430 (594) Q Consensus 356 ---~eq~v~aW~~w~~~~g~v~~v~~~~~~~~d~~y~~v~r~~~~~g~~~~~~~le~~~~~~~~~--~~~~~~~~~~~~~ 430 (594) +||+|+|||||++ +|.++++|+++ .+|++|++|+|. ++|. ++|+|+.....+ ....+++++...+ T Consensus 540 ~~~~e~~v~aW~r~~~-~g~~~~~~~~~--~~d~l~~vv~r~--~~g~-----~ier~~~~~~~~~~~~~~~~lD~~~~~ 609 (803) T protein:vir:70 540 WQGTERVQAAWHKWEW-PLGTFIRGMFY--SGEHLYLLIERG--STGV-----YLERMDMGDALVYNLNDRIRMDRQAEL 609 (803) T ss_pred ecCCcEEEEeEEEEEc-CCCEEEEEEEe--cCCEEEEEEEEC--CCeE-----EEEEEecccccccCCcceeEeccceeE Confidence 8999999999999 78888888876 479999999994 4442 467776433221 1222333333221 Q ss_pred -------cccccCCcccCcee------------EEEEeCCeeccCeEecCCceE-----EEEecCCCCCeEEEeEeeeeE Q lcl|Aclame:pro 431 -------NGDVLNLDRYIGRT------------AVIFSKYGLEAEVEVNNIGLT-----HRINGYDPNTVYYVGYKMDSY 486 (594) Q Consensus 431 -------~~~~~~l~~l~g~t------------v~i~adg~~~~~~~v~~~~~t-----l~~~~~~~~~~v~VG~~y~~~ 486 (594) ....+.+.|+++.+ ...+.++.+.... ..++++ ..+.++.++++++||++|+++ T Consensus 610 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~--~~g~~t~~~~~~~~~~~~~a~~v~VGl~Y~~~ 687 (803) T protein:vir:70 610 IFRHIKAEDVWVSEPLPWQPTDVTLLDCVLIDGWDSYIGGSFLFSY--NPGDNTLTTTFDMHDDDHVKAKVVVGQLYPQE 687 (803) T ss_pred eeccccCCceeeeecccccCcccceeeEEEeeeeeeecCCeEEEEE--cCCCccceeeeeEECCCCcccEEEEeeeeeEE Confidence 11233334444432 2222233332222 222222 346788999999999999999 Q ss_pred EEecceeeeCCCCcccee-eEEEEEEEEEEEcccceEEeeeecccccccc--cccccc---ccCCCccccccCcEEEEee Q lcl|Aclame:pro 487 FRTLTPSNGDMKKSMFGS-KIRISKVQLALFDSIEPTVNGEPADDRSTDD--IMDARL---LDFSSNSGSSNGTRLVDYN 560 (594) Q Consensus 487 v~~~~~~~~~~~g~~~~~-~~ri~~v~v~l~~S~g~~v~~~~~~~~~~~~--~~~~~~---~~~~~~~~~~tg~~~v~~~ 560 (594) ++++||++++++|..++. ++||+|+.+++.+|+++.+............ ..+++. ....+.+++.+|+.++| T Consensus 688 ~~~~~~~i~~~~~~~~~~~~~rl~r~~~~~~~sg~~~v~v~~~~~~~~~~~~~s~~~~g~~~~~~g~~~~~tg~~~vP-- 765 (803) T protein:vir:70 688 FEPTQVVIRDNQERVSYIDVPTVGLVHLNLDKYPDFKVEVKNLKSGKVRNVLASNRVGGAINNIVGYVEPREGVFKFP-- 765 (803) T ss_pred EeecceEEEcCCCccccccccEEEEEEEEeecccceEEEEecCCccccceeeccchhccccccccCccccccceEEEE-- Confidence 999999999999988876 7899999999999988887554333222111 112222 22345677888887776 Q ss_pred cCCcCcceEEEEEECCCcCEEEEEEEEEEEeccC Q lcl|Aclame:pro 561 PLGWENDGKMVIAVEQPFLCEVVGVFSVVQSNKV 594 (594) Q Consensus 561 ~~g~~~~~~v~I~~~~P~P~tIlai~~~v~~n~~ 594 (594) +.+|+++.+|+|+|++|+||+||||++|..+|+- T Consensus 766 ~~~~~~~~~v~i~~d~P~P~tvlsi~weg~y~~r 799 (803) T protein:vir:70 766 LRSLSTDTVYRVMVESPHTFQLRDIEWEGSYNPT 799 (803) T ss_pred eeccCcceEEEEEECCCCCeEEEEEEEEEEEecc Confidence 4689999999999999999999999999999999 No 21 >protein:vir:105647 Length: 800 # NCBI annotation: putative tail tubular B protein # Family: family:all:825 # MgeID: mge:1674 # MgeName: K1E # Cross-refs: genbank:acc:YP_425011;genbank:gi:83571759;uniprot:Q2WC41;genbank:GeneID:3837288 Probab=100.00 E-value=5.3e-121 Score=679.99 Aligned_cols=559 Identities=12% Similarity=0.029 Sum_probs=421.1 Q ss_pred CCc-ccccccccceecchhcccchHHHHHHHHHhhcCcEEeecCCceecCcceeeeeeeCCCCCEEEEEEEeCC----Cc Q lcl|Aclame:pro 1 MAD-FSQTSFKGGVIAPRLQFNEYESAYHHSIEDAVNFVVTEQGSLITRCGSEEVGLCQDGEVRLFRLPAVDAP----SN 75 (594) Q Consensus 1 m~~-~~~~~f~~Ge~sp~l~~r~d~~~y~~~~~~~~N~~~~~~G~~~~rpg~~~~~~~~~~~~~~rlipF~~s~----~q 75 (594) |.= =.-+||.+| +..+.|++||.++|++|+||++.|+||++||||++||+.++++. ..++.||.+.. ++ T Consensus 1 ~~v~~s~~nl~~G-----vSqQ~d~~R~~~q~~~~~N~~~~~~gGl~rRpGt~fva~l~~~~-~~~~~~~~~~~~~~~~~ 74 (800) T protein:vir:10 1 MEVQGSLGRQIQG-----ISQQPPAVRLDGQCTTMVNMVPDVVNGTQSRMGTTHIAKLLDEG-TDNMATHHYRRGEGDEE 74 (800) T ss_pred CeEEeecchhccc-----ccccchhHhhhhhhhhhhcceeeeccCcccCCcceEEEeecCCC-CCccEEEEEecCCccce Confidence 663 256889999 66788999999999999999999999999999999999998763 45566665543 34 Q ss_pred eEEEEEeCCeEEEEeCCceEEecccccccccceeecccchhhhccceeEecCcEEEEecCCccceeEEeeccCce----- Q lcl|Aclame:pro 76 DVIVEVGNTNIAVWVNDVRQVVANTPSEWRNTIDRIQTAYDTIGDDAGAANTGRLIMVHPALQPKRLYRDNNNAW----- 150 (594) Q Consensus 76 ~y~le~g~~~~r~~~~~~~~~~~~~~~~~~~~~~~tpyta~~l~~i~~aq~adv~~~v~~~~~p~~L~R~~~~~w----- 150 (594) .|+++++.+++|+|..+|..+......+...+ .+.++....+|+++|++|++|++|++++|+.+.|..++.| T Consensus 75 ~~~~~~~g~~~rv~~~~G~~~~v~~~~~~~~~---~~~~~~~~~~l~~~tvaD~tfi~n~~~~~~~~~~~~~~~~~~~~~ 151 (800) T protein:vir:10 75 YFFTLKKGQVPEIFDKHGRKCNVISQDAPMTY---LSEVVNPREDVQFMTIADVTFMLNRRKVVKVSNRKSPKVGDKAIV 151 (800) T ss_pred EEEEEEcCCeEEEEecCCcEEEeecCCcceee---eeccCCchhhEEEEEEcCEEEEecCcccccccccCCCCCCceEEE Confidence 46667777899999999888765433322211 1113334577999999999999999999988666433332 Q ss_pred -----------------------------------------------------------eecc----------------- Q lcl|Aclame:pro 151 -----------------------------------------------------------QFVN----------------- 154 (594) Q Consensus 151 -----------------------------------------------------------~~~~----------------- 154 (594) ++.. T Consensus 152 ~vr~g~y~~~y~i~i~g~~~~~~~t~~~~~~~~~~~~s~~~i~~~L~~~l~~~~~~~~~t~~~~g~~i~i~~~~~~~~~~ 231 (800) T protein:vir:10 152 FCAYGQYGTSYSIIINGTTAASFKTPDGGSAEHVEQIRTERITSELYSKLQQWSGVNDYEIQRDGTSIFIERRDGKSFTV 231 (800) T ss_pred EEeccccccceeEEeccceEEEEEecCCCcccccccccHHHHHHHHHhhhhhcCcccceEEEEcCcEEEEEEecCCceEE Confidence 0000 Q ss_pred --c--------------------------------------------------------ccce--------------ee- Q lcl|Aclame:pro 155 --M--------------------------------------------------------HTGA--------------VP- 161 (594) Q Consensus 155 --~--------------------------------------------------------~~~~--------------~p- 161 (594) . .|.. .| T Consensus 232 ~~~~~~~~~~~~~~~~~v~~~~~Lp~~~~~g~~~~i~~~~~~~~~~y~~~~~~~~~~~~~w~e~~~~~~~~~~~~~tmp~ 311 (800) T protein:vir:10 232 TTTDGAKGKDLVAIKNKVSSTDLLPSRAPAGYKVQVWPTGSKPESRYWLQAEPKEGNLVSWKETIAADVLLGFDKGTMPY 311 (800) T ss_pred EEeecCCcceEEEEEeeccceeeccccCCCCceEEEEcCCCCCCceeEEEEEeccccceEEEeecccCceeeeecccccE Confidence 0 0000 00 Q ss_pred -------------------ec------cc------------cCCcceEEEEEeceEEEEeCCCCCcEEEEEecccccccc Q lcl|Aclame:pro 162 -------------------AE------WS------------PSNYPQTVGIFQNRVWYVGSPVHRTYFWATRAGKLEDIA 204 (594) Q Consensus 162 -------------------~~------~~------------~~g~Ps~v~f~~~RL~~~~~~~~p~~v~~S~~gd~~nF~ 204 (594) .| ++ ..++|++|+||||||+|++ ||+|||||+||||||+ T Consensus 312 ~lv~~~~~~~~~~~~~~~~~w~~r~~gd~~tnp~psf~~~~~~~~i~~v~f~q~RL~f~~----~~~v~~Srtgd~~nF~ 387 (800) T protein:vir:10 312 IIERTGIIDGIAQFKIRQGDWEDRKVGDDLTNPMPSFIDEEVPQTIGGMFMVQNRLCFTA----GEAVIASRTSYFFDFF 387 (800) T ss_pred EEEEeeeeecceeEEEEeccccccccCCCCCCCCchhcCCCCCCCceeEEEEeeeEEEee----CCeEEEEccCCccccc Confidence 00 00 0135778899999999998 5789999999999999 Q ss_pred cccc--CCCCccEEEEE-cCCccEEEE-EEcCCCEEEEecCcEEEEecCCCcccCcceeEEEeeeec-ccCCcccEEeCC Q lcl|Aclame:pro 205 PSTA--NNPNDPISFVG-IMEGTPCWI-IASSDVLTIGTTINDYQLAASTGVSVTAATAILRRSSVQ-GTAAVQGIPAEE 279 (594) Q Consensus 205 ~~t~--~~d~d~i~~~~-s~~~~~i~~-~~~~~~L~l~t~~~q~~l~~~~~~~lTP~~~~~~~~s~~-g~~~~~Pv~~g~ 279 (594) ++++ ..|||||++++ +++.+.|.| ++++++|+|||+++||+|+++ ++|||+|++++++|.+ +++.|+|+.+|+ T Consensus 388 ~~t~~~~~DdD~I~~~~ss~~~~~i~~~v~~~~~L~l~T~g~q~~l~g~--~~lTP~~~~i~~~s~~~~~~~~~Pv~vG~ 465 (800) T protein:vir:10 388 RYTVISALATDPFDIFSDASEVYQLKHAVTLDGATVLFSDKSQFILPGD--KPLEKSNALLKPVTTFEVNNKVKPVVTGE 465 (800) T ss_pred cccccCCCCCccEEEEEcCCcceeeeeEeecCCcEEEEecCcEEEEeCC--CcccceeEEEEEEEeeeccCCCCceEeCC Confidence 9985 46999999955 556676654 677899999999999999885 4899999999999976 567899999999 Q ss_pred eEEEEEcCCC--EEEEEEeeecccceeecchhhhhhhhhcccccccCCceEEEEEeCCCCeEE-EEEcCCCeEEEEEEe- Q lcl|Aclame:pro 280 QVIFCSRNKS--KVYAMNYVREQDNWIPDEMSSQAQHLFTPISSAKGASVRRVAYISDAAKSL-WVVLENGQINYCCFD- 355 (594) Q Consensus 280 ~v~F~~~~g~--~v~e~~~~~~~d~~~~~dls~~a~hl~~~~~~~~~~~i~~~a~~~~p~~~~-~~~~~dg~~~~~ty~- 355 (594) +++|++++|+ +||||.|++++|+|.++|+|+|++||+ +++|.+|+++++|+.++ |+..+++++++|+|+ T Consensus 466 ~v~Fv~~~g~~s~vre~~~~~~~d~~~a~DlT~~~~hl~-------~~~v~~~~~~~~~~~~v~~~~~~~~~l~~~~yl~ 538 (800) T protein:vir:10 466 SVMFATNDGSYSGVREFYTDSYSDTKKAQAITSHVNKLI-------EGNITNMAASTNVNRLLVTTDKYRNIIYCYDWLW 538 (800) T ss_pred eEEEecCCCCeeEEEEEeeeecccceehhhHHhHHHHhc-------CCceEEEEEeCCCCeEEEEEEcCCCeEEEEEEee Confidence 9999999985 699999999999999999999999997 46899999999988866 556678899999986 Q ss_pred --cccceEeEEEeecCCCeEEEEEEEccCCCCEEEEEEEECCCCCcceeEEEEEeccCccccc------ceeeeeeEEcc Q lcl|Aclame:pro 356 --RTTDTKAWTQLELSGGKVIDIAAAFNPDSDYAYVAVVRSKAINGVQKNYTVLEKISSPRTD------WKRADGWVVAQ 427 (594) Q Consensus 356 --~eq~v~aW~~w~~~~g~v~~v~~~~~~~~d~~y~~v~r~~~~~g~~~~~~~le~~~~~~~~------~~~~~~~~~~~ 427 (594) +||+|+|||||+++++.+..+|.+. +|++|++|+|... .+||||+..... ..+.|+..... T Consensus 539 ~~~e~~~~aW~~w~~~~~~~~~~~~~~---~d~l~~iv~r~~~--------~~ier~~~~~~~~~~~~~~~~lD~~~~~~ 607 (800) T protein:vir:10 539 QGTDRVQSAWHVWEWPMGTKVRGMFYS---GELLYLLLERGDG--------VYLEKMDMGDALTYGLNDRIRMDRQAELI 607 (800) T ss_pred cCCceEEEEEEEEEcCCCcEEEEEEEe---CCeEEEEEECCCc--------EEEEEEecccCccccccceeeeecceeec Confidence 7888999999999776665555542 6899999999532 348888653322 12333322111 Q ss_pred Cc---cc----ccccCCcccCc--------eeEEEEeCCeeccCeEecCCceEEEE---ecCCCCCeEEEeEeeeeEEEe Q lcl|Aclame:pro 428 VN---QN----GDVLNLDRYIG--------RTAVIFSKYGLEAEVEVNNIGLTHRI---NGYDPNTVYYVGYKMDSYFRT 489 (594) Q Consensus 428 ~~---~~----~~~~~l~~l~g--------~tv~i~adg~~~~~~~v~~~~~tl~~---~~~~~~~~v~VG~~y~~~v~~ 489 (594) .. +. ....++.+.++ .....+++|.+.....+..+++++.. +++.++++|+||++|+++++| T Consensus 608 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~~~~~~~~g~~~~~~~~~~g~~~~~~v~VGl~Y~s~~~~ 687 (800) T protein:vir:10 608 FKHFKAEDEWISEPLPWTPTNPELLDCILIEGWDSYIGGSFLFKYKPSDNTLSTTFDMHDDNHVKAKVIVGQIYPQEFEP 687 (800) T ss_pred ccccccCcceEEEeccccccCCcceEEeeeccceeecCceeEEEEEecCCceEeeeeecCCCcccceEEEeeeeeEEEee Confidence 11 11 01123333344 44445566777777888888887653 457788999999999999999 Q ss_pred cceeeeCCCCcccee-eEEEEEEEEEEEcccceEEeeeeccccccc-ccc-c---cccccCCCccccccCcEEEEeecCC Q lcl|Aclame:pro 490 LTPSNGDMKKSMFGS-KIRISKVQLALFDSIEPTVNGEPADDRSTD-DIM-D---ARLLDFSSNSGSSNGTRLVDYNPLG 563 (594) Q Consensus 490 ~~~~~~~~~g~~~~~-~~ri~~v~v~l~~S~g~~v~~~~~~~~~~~-~~~-~---~~~~~~~~~~~~~tg~~~v~~~~~g 563 (594) +||++++++|+.+++ |+||+|+++++.+|+++.++.......... ..+ . .......+.+++.+|++++|+ .+ T Consensus 688 ~~~~i~~~~g~~~~~~r~~i~r~~~~~~~sg~~~~~v~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~tg~~~vp~--~g 765 (800) T protein:vir:10 688 TPVVIRDRQDRVSYIDVPVVGLVHLNLDMYPDFSVEVKNVKSGKVRRVLASNRIGGALNNTVGYVEPREGVFRFPL--RA 765 (800) T ss_pred cceEEEcCCCcccccCCeEEEEEEEEeecCceEEEEeccCcccceeEEccCCeeccccccccCcccccCceEEEEE--ec Confidence 999999999998877 889999999999999988864332221111 111 1 112233466778899888865 58 Q ss_pred cCcceEEEEEECCCcCEEEEEEEEEEEeccC Q lcl|Aclame:pro 564 WENDGKMVIAVEQPFLCEVVGVFSVVQSNKV 594 (594) Q Consensus 564 ~~~~~~v~I~~~~P~P~tIlai~~~v~~n~~ 594 (594) |+++.+|+|++++|+||+||||++|..+|+- T Consensus 766 ~~~~~~v~i~~d~P~P~tvlai~~eg~y~~r 796 (800) T protein:vir:10 766 KSTDAVYRIIVESPHTFQLRDIEWEGSYNPT 796 (800) T ss_pred cCceeEEEEEECCCCcEEEEEEEEEEEeecc Confidence 9999999999999999999999999999999 No 22 >protein:vir:103341 Length: 806 # NCBI annotation: tail tubular protein B-like protein # Family: family:all:825 # MgeID: mge:1609 # MgeName: Era103 # Cross-refs: genbank:acc:YP_001039670;genbank:gi:125999999;genbank:GeneID:4818417 Probab=100.00 E-value=2.3e-118 Score=665.48 Aligned_cols=564 Identities=13% Similarity=0.055 Sum_probs=412.2 Q ss_pred CCcc--cccccccceecchhcccchHHHHHHHHHhhcCcEEeecCCceecCcceeeeeeeCCCC-CEEEEEEEeCC-Cce Q lcl|Aclame:pro 1 MADF--SQTSFKGGVIAPRLQFNEYESAYHHSIEDAVNFVVTEQGSLITRCGSEEVGLCQDGEV-RLFRLPAVDAP-SND 76 (594) Q Consensus 1 m~~~--~~~~f~~Ge~sp~l~~r~d~~~y~~~~~~~~N~~~~~~G~~~~rpg~~~~~~~~~~~~-~~rlipF~~s~-~q~ 76 (594) |- | .-+||.+| +.-+.|+.||.++|++|+||++.|+||++||||++||+.+++... ..++..|.+++ .+. T Consensus 1 ~~-v~~s~~nl~~G-----vSqQ~d~~R~~~q~~~~~N~~~~~~~Gl~rRPgt~~va~l~~~~~~~~~~~~~~~~~~~~~ 74 (806) T protein:vir:10 1 ME-VQGSYGRQLQG-----VSQQPIAVRLPGQVTSQLNAVPNVVDGLKTRMGSKHLARILNSLDANSLIHHYKRGDDAEE 74 (806) T ss_pred Ce-eEeecchhccc-----eeccChhHhhhhhhhhhhcceeccccccccCCchhhhhhhcCCCCccceEEEEEecCCceE Confidence 53 3 45788888 567789999999999999999999999999999999999986432 33334444433 469 Q ss_pred EEEEEeCCeEEEEeC-CceEEe-cccccccccceeecccchhhhccceeEecCcEEEEecCCccceeEEeec--cCceee Q lcl|Aclame:pro 77 VIVEVGNTNIAVWVN-DVRQVV-ANTPSEWRNTIDRIQTAYDTIGDDAGAANTGRLIMVHPALQPKRLYRDN--NNAWQF 152 (594) Q Consensus 77 y~le~g~~~~r~~~~-~~~~~~-~~~~~~~~~~~~~tpyta~~l~~i~~aq~adv~~~v~~~~~p~~L~R~~--~~~w~~ 152 (594) |+++|.++.+|+|.. ++.... ...+.. . ...++++....+|+++|++|++|++|+.++|+.+.+.. ++.|.+ T Consensus 75 y~v~~~~g~i~v~~~~~G~~~~v~~~~~~--~--~yl~~~~~~~~~l~~~tvaD~tfi~n~~~~~~~~~~~~~~~~~~~~ 150 (806) T protein:vir:10 75 YFVILQPGQVPVIFTVGGLACPVNTQGSA--A--TYLSSSSLPRETTQLMTIGDYTFVLNRKMPVQARGDVTPSLDNKGL 150 (806) T ss_pred EEEEEcCCcEEEEEcCCCcEEEecCCCce--E--EEeccCCCCcceeeEEEEcCEEEEecCcEeeeecccccCCCCcceE Confidence 999999999999963 333322 221111 1 11234445566777777777777777777776554311 100000 Q ss_pred -------------------------------------------------------------------------------- Q lcl|Aclame:pro 153 -------------------------------------------------------------------------------- 152 (594) Q Consensus 153 -------------------------------------------------------------------------------- 152 (594) T Consensus 151 v~v~~g~y~~~y~i~Ing~~~a~~~t~~~~~~~~~~~~~~~~~a~~l~~~l~~~~~~~~~~~~~~~g~~~~i~~~~~~~~ 230 (806) T protein:vir:10 151 VYVAYANFSFTYQILINGQVAAEHKTASSEDVKNEDLVRTDYVAGKLLENFNSRTASFPGFSMYQDGNVLVVDNSNGANY 230 (806) T ss_pred EEEeecccCceeeEEeccceEEEEEeccCCCcccccccchhHHHHHHHhhhcccccccceeEEEEcccEEEEecCCCCcc Confidence Q ss_pred -------------c------------------------------------------------------------------ Q lcl|Aclame:pro 153 -------------V------------------------------------------------------------------ 153 (594) Q Consensus 153 -------------~------------------------------------------------------------------ 153 (594) . T Consensus 231 ~~~~~~g~~~~~~~~~~~~v~~~~~lp~~~~~g~~v~i~~~~~~~~~~y~v~~~~~~~~~~~w~e~~~~~~~~~~~~~t~ 310 (806) T protein:vir:10 231 ALTTVDGADGQDLVAIRHKVTNLDTLPNRAPVGYKVQVWPTGSKPESRYWLQAESQDGSKVTWVETIAPGVRKGWNAATM 310 (806) T ss_pred EEEEeeCCCCceeEEeecccCccccCccccCCCcEEEEeccCCCCCCceEEEEEeeccCceEEEeecccccccceecccc Confidence 0 Q ss_pred --------------------ccccceeeec----------cc-cCCc-ceEEEEEeceEEEEeCCCCCcEEEEEeccccc Q lcl|Aclame:pro 154 --------------------NMHTGAVPAE----------WS-PSNY-PQTVGIFQNRVWYVGSPVHRTYFWATRAGKLE 201 (594) Q Consensus 154 --------------------~~~~~~~p~~----------~~-~~g~-Ps~v~f~~~RL~~~~~~~~p~~v~~S~~gd~~ 201 (594) ...|..+... .+ .+|+ |+.|+||||||+|++ ||+|||||+|||| T Consensus 311 p~~~v~~~~~~~~~~~~~~~~~~w~~r~~Gd~~tn~~psF~~~~~~~~it~v~f~q~RL~f~s----~~~v~~Srsgd~~ 386 (806) T protein:vir:10 311 PHVLVRESLNANGSANFTYRPGEWEDRDVGDDLTNDFPSLLNDSSPQPISSMLMVQNRLMLTS----GEAVVASRTSRFF 386 (806) T ss_pred ceEEEeeeeeecccceeEEEecccccccccccccCccCcccCCCCCccceEEEEEeeeEEEec----CCeEEEEccCCcc Confidence 0000000000 00 0112 467999999999997 5789999999999 Q ss_pred cccccccC--CCCccEEEEE-cCCccEEE-EEEcCCCEEEEecCcEEEEecCCCcccCcceeEEEeeeeccc-CCcccEE Q lcl|Aclame:pro 202 DIAPSTAN--NPNDPISFVG-IMEGTPCW-IIASSDVLTIGTTINDYQLAASTGVSVTAATAILRRSSVQGT-AAVQGIP 276 (594) Q Consensus 202 nF~~~t~~--~d~d~i~~~~-s~~~~~i~-~~~~~~~L~l~t~~~q~~l~~~~~~~lTP~~~~~~~~s~~g~-~~~~Pv~ 276 (594) ||+++++. +|||||++++ +++.+.|. +++++++|+|||+++||+|+++ ++|||+|++++++|.+++ +.|+|+. T Consensus 387 nF~~~t~~~~~DdD~I~~~~ss~~~~~i~~~v~~~~~L~l~t~~~q~~l~~~--~~lTP~~~~~~~~s~~~~~~~~~Pv~ 464 (806) T protein:vir:10 387 DFFRYTVLATVDTDPFDVFADIEEVYNIRWSAQMDGDVVLFTSDQQFTLPGD--KPLTPTSAVIRPVTQFKMTPGVKPAP 464 (806) T ss_pred cCccccccCCCCCccEEEEEcCCcceeeeeeeecCCcEEEEecCcEEEEeCC--CcccceeEEEEEEEeecccCCCCceE Confidence 99999854 5999999955 55667665 5677899999999999999885 489999999999998775 5799999 Q ss_pred eCCeEEEEEcCC--CEEEEEEeeecccceeecchhhhhhhhhcccccccCCceEEEEEeCCCCeEEEEEcCCCeEEEEEE Q lcl|Aclame:pro 277 AEEQVIFCSRNK--SKVYAMNYVREQDNWIPDEMSSQAQHLFTPISSAKGASVRRVAYISDAAKSLWVVLENGQINYCCF 354 (594) Q Consensus 277 ~g~~v~F~~~~g--~~v~e~~~~~~~d~~~~~dls~~a~hl~~~~~~~~~~~i~~~a~~~~p~~~~~~~~~dg~~~~~ty 354 (594) +|++++|++++| ++||||.|++++|+|.++|+|+|++||++ ++.+..++++++|..++|++++||++++|+| T Consensus 465 vG~~v~Fv~~~g~~s~vre~~y~~~~d~~~~~DlT~~~~hl~~------g~~~~~~~~~~~~~~~~~~~~~dg~l~~~ty 538 (806) T protein:vir:10 465 SGDSILFAFDQGSYSGIREFFTDSYSDTKKAQPATSHVDKYIR------GKVLELSASSSFNRAFIITSPDRNILYVYDW 538 (806) T ss_pred eCCeEEEeeCCCCeeEEEEEEeeeeccceehhhHHHHHHHhcC------CCeEEEEEeCCCCcEEEEEEcCCCEEEEEEE Confidence 999999999998 67999999999999999999999999984 3456777888888999999999999999999 Q ss_pred e---cccceEeEEEeecCCCe-EEEEEEEccCCCCEEEEEEEECCCCCcceeEEEEEeccCcccccc------eeeeeeE Q lcl|Aclame:pro 355 D---RTTDTKAWTQLELSGGK-VIDIAAAFNPDSDYAYVAVVRSKAINGVQKNYTVLEKISSPRTDW------KRADGWV 424 (594) Q Consensus 355 ~---~eq~v~aW~~w~~~~g~-v~~v~~~~~~~~d~~y~~v~r~~~~~g~~~~~~~le~~~~~~~~~------~~~~~~~ 424 (594) + +||+|+|||||+++++. +++|+++ +|.+|++|+|.+..++..++| +|+|+...... .++|+.. T Consensus 539 ~~~~~e~~v~aW~rw~~~~~~~~~~~~~~----~d~l~~vv~R~~~~~g~~~~~--iE~~~~~~~~~~~~~~~~~lD~~~ 612 (806) T protein:vir:10 539 LYEGTEKVQNAWHKWSFPAGTVLHAVSYS----NEKLYLVLTRTNTSGGVAGVY--IEVMDMGDELEYGLQDRVRMDRRA 612 (806) T ss_pred eecCCceEEEeEEeeeeCCCeEEEEEEEe----cCeEEEEEEEcCCcccEEEEE--EEeecCCCCCCcccceeeeccccc Confidence 6 78889999999996554 4444443 689999999987668888876 78887553322 2233322 Q ss_pred EccCc--------ccccccCCcccCceeEEEEeCCeeccC-----eEecCCceEEEEec---CCCCCeEEEeEeeeeEEE Q lcl|Aclame:pro 425 VAQVN--------QNGDVLNLDRYIGRTAVIFSKYGLEAE-----VEVNNIGLTHRING---YDPNTVYYVGYKMDSYFR 488 (594) Q Consensus 425 ~~~~~--------~~~~~~~l~~l~g~tv~i~adg~~~~~-----~~v~~~~~tl~~~~---~~~~~~v~VG~~y~~~v~ 488 (594) ..... ...++.++.|++|+++.++++|..... ....+...+....+ +.++.+|+||++|+++++ T Consensus 613 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~v~~~~~~~~~~~~~v~vGl~Y~s~~~ 692 (806) T protein:vir:10 613 TLSMTYNATTRVWTSSALPWLPQDLSSLDAVLVSGWAGYVGGAFQFSYNASNNTISTNFDLAEGNTATIVVGETYWYEVE 692 (806) T ss_pred eEEEeccccccceeeeeeccccccccceeEEEEeeccccCCceEEEEEcCccceEeeeeeecCCCCcEEEEeeeeeEEEE Confidence 22111 122456788999999999988864321 11222222222212 456788999999999999 Q ss_pred ecceeeeCCC-CccceeeEEEEEEEEEEEcccceEEeeeecc--cccccccccccc---ccCCCccccccCcEEEEeecC Q lcl|Aclame:pro 489 TLTPSNGDMK-KSMFGSKIRISKVQLALFDSIEPTVNGEPAD--DRSTDDIMDARL---LDFSSNSGSSNGTRLVDYNPL 562 (594) Q Consensus 489 ~~~~~~~~~~-g~~~~~~~ri~~v~v~l~~S~g~~v~~~~~~--~~~~~~~~~~~~---~~~~~~~~~~tg~~~v~~~~~ 562 (594) |++|++++++ +...++|+||+|+.+++.+|+++.+...... .+......+... ....+.+++.+|+.++|+ . T Consensus 693 ~t~p~~~~~~~~~~~~~r~~l~r~~~~~~~s~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~tg~~~vp~--~ 770 (806) T protein:vir:10 693 PTPPLIKDSKDRVSYLDTPTVGNVYLNLDMYPDFSVVVTDKETLQERTVYLANKTAGSITNVIGYIAPHEGTLRIPL--R 770 (806) T ss_pred ECCeeEeccCCCccccccEEEEEEEEEeecceeeEEEEcccCCCcceeeeccCcccccccccccccccccceEEEEe--e Confidence 9999998765 4556779999999999999988876443221 121111222222 223356778888887765 6 Q ss_pred CcCcceEEEEEECCCcCEEEEEEEEEEEeccC Q lcl|Aclame:pro 563 GWENDGKMVIAVEQPFLCEVVGVFSVVQSNKV 594 (594) Q Consensus 563 g~~~~~~v~I~~~~P~P~tIlai~~~v~~n~~ 594 (594) +|+++.+|+|+|++|+||+|+||.+|..+|+= T Consensus 771 ~~~~~~~v~i~~d~P~P~tvlai~~eg~y~~r 802 (806) T protein:vir:10 771 RKSTDVSFKIRSKSPATFQLRDIEWTGSYNPR 802 (806) T ss_pred ecCceeEEEEEECCCCceEEEEEEEEEEeecc Confidence 89999999999999999999999999999998 No 23 >protein:vir:100022 Length: 976 # NCBI annotation: T7-like tail tubular protein B # Family: family:all:825 # MgeID: mge:1604 # MgeName: P-SSP7 # Cross-refs: genbank:acc:YP_214208;genbank:gi:61806431;genbank:GeneID:3294702 Probab=100.00 E-value=5e-99 Score=559.50 Aligned_cols=558 Identities=13% Similarity=0.064 Sum_probs=367.1 Q ss_pred CCccc------cccccccee----------cch-----hcccchHHHHHHHHHhhcCcEEeecCC-ceecCcceeeeeee Q lcl|Aclame:pro 1 MADFS------QTSFKGGVI----------APR-----LQFNEYESAYHHSIEDAVNFVVTEQGS-LITRCGSEEVGLCQ 58 (594) Q Consensus 1 m~~~~------~~~f~~Ge~----------sp~-----l~~r~d~~~y~~~~~~~~N~~~~~~G~-~~~rpg~~~~~~~~ 58 (594) ++.+. ..+++..+- .|. -...++-+.....++...+-.....|. +.+.++..|+- . T Consensus 325 ~~~V~v~g~~Y~it~~~~~~~~~~a~~~~~~~~~t~~d~~~~~~~~~ia~~L~~~l~a~~~~~g~tv~~~g~~~~i~-~- 402 (976) T protein:vir:10 325 YFYVWMKDGYYKITVEAISTANVQANLGLIRPNPTPFDTETAVTAESIIGDIRTAIIATGNFTSANVQQIGTGLYVT-R- 402 (976) T ss_pred eEEEEccccceeeEEEEeeceeEEeccccccCcCCcCcccccccHHHHHHHHHHhhcccccccceEEEEcCcEEEEE-e- Confidence 11110 001100000 010 011233344333333333222222333 33444544442 1 Q ss_pred CCCCCEEEEEEEeCCCceEEEEEeCCeEEEE------eCCceEEe-cccccccccceeecccchhh--hccceeEe--cC Q lcl|Aclame:pro 59 DGEVRLFRLPAVDAPSNDVIVEVGNTNIAVW------VNDVRQVV-ANTPSEWRNTIDRIQTAYDT--IGDDAGAA--NT 127 (594) Q Consensus 59 ~~~~~~rlipF~~s~~q~y~le~g~~~~r~~------~~~~~~~~-~~~~~~~~~~~~~tpyta~~--l~~i~~aq--~a 127 (594) +++ =|..+....+.+..--..+... ...+..+. .....+...+ ...|.+.. .....|.. .. T Consensus 403 -~~~-----~~~~s~~~~~~~~~~~~~V~~~~~LP~~~~~g~~v~V~~~~~~~d~y--yv~~~~~~~~~~~~~w~E~~~~ 474 (976) T protein:vir:10 403 -PSG-----TFNVTAPSSDLLRVMSGEVANVDDLPSQCKHGYVVKVANSEADADDY--YVKFFGHNNRDGDGVWEECAKP 474 (976) T ss_pred -cCc-----ceEecCCCceeEEEEEeeecchhhhhhhccCCcEEEEecCCCCceeE--EEEeeccccccccceEEEeecc Confidence 111 1333433222211100011100 01111111 1111111101 11122211 11223433 33 Q ss_pred cEEEEecCCccceeEEeeccCceeecccccceeeecccc-CCcce-------EEEEEeceEEEEeCCCCCcEEEEEeccc Q lcl|Aclame:pro 128 GRLIMVHPALQPKRLYRDNNNAWQFVNMHTGAVPAEWSP-SNYPQ-------TVGIFQNRVWYVGSPVHRTYFWATRAGK 199 (594) Q Consensus 128 dv~~~v~~~~~p~~L~R~~~~~w~~~~~~~~~~p~~~~~-~g~Ps-------~v~f~~~RL~~~~~~~~p~~v~~S~~gd 199 (594) +..+-.+.+.||+.|.|.+++.|.+.+.+|..+..+++. +++|+ .|+||||||+|++ ||+|||||+|| T Consensus 475 g~~~g~~~~tmP~~l~~~~~g~f~~~~~~w~~r~vGd~~tnp~psf~g~~is~v~f~q~RL~f~s----~~~v~~Srtgd 550 (976) T protein:vir:10 475 SRNIEFDKGTMPIQLVRQANGTFTVSQATWQNAEVGDELTNPNPSFVGKTINQLVFFRNRLVFLS----DENVIMSRPGE 550 (976) T ss_pred ccccccccccccEEEEecccCeEEeeeccccccccCCcccCcCceecccccceEEEEcceEEEec----CCeEEEEecCC Confidence 667778899999999999999999999999988776643 33544 5899999999998 57899999999 Q ss_pred cccccccccC--CCCccEEEEE-cCCccEEEE-EEcCCCEEEEecCcEEEEecCCCcccCcceeEEEeeeecc-cCCccc Q lcl|Aclame:pro 200 LEDIAPSTAN--NPNDPISFVG-IMEGTPCWI-IASSDVLTIGTTINDYQLAASTGVSVTAATAILRRSSVQG-TAAVQG 274 (594) Q Consensus 200 ~~nF~~~t~~--~d~d~i~~~~-s~~~~~i~~-~~~~~~L~l~t~~~q~~l~~~~~~~lTP~~~~~~~~s~~g-~~~~~P 274 (594) ||||+++++. .|||||+++. +++.+.|.| ++++++|+|||+++||+|++++ ++|||+|++++++|.++ ++.++| T Consensus 551 ~~nF~~~t~~~~~DdD~I~~~~ss~~~~~i~~~v~~~~~L~l~T~g~e~~lsg~~-~~lTP~t~~i~~~s~~~~~~~v~P 629 (976) T protein:vir:10 551 FFNFWSKTATTFTPQDVIDLSCSSTYPAIVYDGIQVNAGLLLFTKNQQFMLTTDS-DILSPETAKINAVSSYNFNEKTHP 629 (976) T ss_pred ccccccccccCCCCCccEEEEecCCcceeeEEEEecCCcEEEEecCceEEEecCC-ceecceeEEEEEEEeeeccCCCcc Confidence 9999999854 5999999955 566677655 5668999999999999999863 58999999999999875 568999 Q ss_pred EEeCCeEEEEEcCCCE--EEEEEeeecccceeecchhhhhhhhhcccccccCCceEEEEEeCCCCeEEEEEcCCCeEEEE Q lcl|Aclame:pro 275 IPAEEQVIFCSRNKSK--VYAMNYVREQDNWIPDEMSSQAQHLFTPISSAKGASVRRVAYISDAAKSLWVVLENGQINYC 352 (594) Q Consensus 275 v~~g~~v~F~~~~g~~--v~e~~~~~~~d~~~~~dls~~a~hl~~~~~~~~~~~i~~~a~~~~p~~~~~~~~~dg~~~~~ 352 (594) +.+|++++|++++|++ ++||.|+.+++++.+.|+|.|++||+. +.+..|++|++|..++|++++||+|++| T Consensus 630 v~vG~~v~Fv~~~g~~~r~~~~~~~~~~~~~~~~dlt~~~~~l~~-------g~~~~~a~~~~~~~vv~~~~~~g~l~~~ 702 (976) T protein:vir:10 630 VSLGTTVAFIDNANQFTRFFEMSNVVRQGEPDVVDQSKVISRLLD-------KNISLVSVSRENSVVFFSQKDTDKIYCF 702 (976) T ss_pred EEeCCeEEEEecCCCeEEEEEEeecccccccchhHHHHHhhhhcC-------CceEEEEEcCCCcEEEEEEcCCCEEEEE Confidence 9999999999999974 557777777889999999999999974 5688899999999999999999999999 Q ss_pred EEe---cccceEeEEEeecCCCeEEEEEEEccCCCCEEEEEEEECCCCCcceeEEEEEeccCcccccc------------ Q lcl|Aclame:pro 353 CFD---RTTDTKAWTQLELSGGKVIDIAAAFNPDSDYAYVAVVRSKAINGVQKNYTVLEKISSPRTDW------------ 417 (594) Q Consensus 353 ty~---~eq~v~aW~~w~~~~g~v~~v~~~~~~~~d~~y~~v~r~~~~~g~~~~~~~le~~~~~~~~~------------ 417 (594) +|+ +||+|+|||||++ +|.|++||++ +|++|++|+| ++++..+|| +|++++..... T Consensus 703 ty~~~~~eq~v~aWsr~~~-~G~v~sv~~i----~D~ly~vV~r--~~~g~~~r~--~e~~~~~~~~~~~~~~~~~~~~~ 773 (976) T protein:vir:10 703 RYFTSGEKRLLQAWTTWTI-TGNIQYHCML----DDALYVVTRN--NNKDQIVKY--SLKLDDAGHFVTDTQGTTSTDDD 773 (976) T ss_pred EEeecCCceeEEeeEEEec-CCcEEEEEEe----CCeEEEEEEe--cCCeEEEEE--EEEECCccceeeeccCccccccC Confidence 996 8999999999999 7999999998 6899999999 578888887 56665432211 Q ss_pred ----eeeeeeE---EccCcccc----cccCC---cccCceeEEEEeCCeec----cCeEecCCceEEEEecCCCCCeEEE Q lcl|Aclame:pro 418 ----KRADGWV---VAQVNQNG----DVLNL---DRYIGRTAVIFSKYGLE----AEVEVNNIGLTHRINGYDPNTVYYV 479 (594) Q Consensus 418 ----~~~~~~~---~~~~~~~~----~~~~l---~~l~g~tv~i~adg~~~----~~~~v~~~~~tl~~~~~~~~~~v~V 479 (594) .+.|+.. ....+++. +...+ .+..++.+...+|+... ....+.++. ++++++.++++|+| T Consensus 774 ~~~~~~lD~~~~~~~~~~t~~~~t~~t~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~v~g~~--i~l~g~~~~~~v~V 851 (976) T protein:vir:10 774 SIYRVHLDHSSSVTAASNTYNTTTIKTTIPKPNGYESTKQLVAYDTDAGNDLGRYALVTVSGSN--LEIPGNWSNNSFII 851 (976) T ss_pred CcceeeeccceEEEeccccccCCceeEEeecCccccCceeEEEEecccCcccccceeeeecCCe--eEecCCCCCCeEEE Confidence 1222211 11122211 11222 33444545555555332 223455554 56678889999999 Q ss_pred eEeeeeEEEecceeeeCCCCcccee----eEEEEEEEEEEEcccceEEeeeeccccccccccccccc---cCC-Cccccc Q lcl|Aclame:pro 480 GYKMDSYFRTLTPSNGDMKKSMFGS----KIRISKVQLALFDSIEPTVNGEPADDRSTDDIMDARLL---DFS-SNSGSS 551 (594) Q Consensus 480 G~~y~~~v~~~~~~~~~~~g~~~~~----~~ri~~v~v~l~~S~g~~v~~~~~~~~~~~~~~~~~~~---~~~-~~~~~~ 551 (594) |++|+++++|+||++++++|..+.. |++|+|+++++.+|+++.+........ ......+.. ... +.+++. T Consensus 852 Gl~Y~s~~~~~~~~i~~~~g~~~~~~~~gRl~i~r~~~~~~~tg~~~v~v~~~~~~--~~~~~~~~~~~~~~~~~~~pl~ 929 (976) T protein:vir:10 852 GYLYEMDVQLPTLYVTQQVGDKYRSDAKSSLIVHRIKFSFGPLGVYSTTIQRDGKP--DFTETKELGLAGVVGASRLPIV 929 (976) T ss_pred eeeeEEEEeecceeEEeCCCCcccccceeeEEEEEEEEEeecccceEEEEcCCCCc--cccccccccccCccccccccee Confidence 9999999999999999887765432 678999999999999988765432211 111222221 112 223344 Q ss_pred cCcEEEEeecCCcCcceEEEEEECCCcCEEEEEEEEEEEeccC Q lcl|Aclame:pro 552 NGTRLVDYNPLGWENDGKMVIAVEQPFLCEVVGVFSVVQSNKV 594 (594) Q Consensus 552 tg~~~v~~~~~g~~~~~~v~I~~~~P~P~tIlai~~~v~~n~~ 594 (594) ++. .+.+++.+|+++.+|+|+|++|+||+||||++|..+|+= T Consensus 930 ~~~-~~~vP~~~~~~~~~v~i~~d~PlP~tilsi~~eg~yn~r 971 (976) T protein:vir:10 930 PEV-IETVPCYERNTNLKVNVKSEHPAPATLYSLAWEGDFTNR 971 (976) T ss_pred cCc-EEEEEeccCCceeEEEEEECCCCceEEEEEEEEEEeccc Confidence 443 334456799999999999999999999999999999998 No 24 >protein:vir:78703 Length: 905 # NCBI annotation: tail tube B # Family: family:all:825 # MgeID: mge:1856 # MgeName: Syn5 # Cross-refs: genbank:acc:YP_001285450;genbank:gi:148724484;genbank:GeneID:5220174 Probab=100.00 E-value=4.4e-99 Score=559.80 Aligned_cols=558 Identities=11% Similarity=0.047 Sum_probs=370.4 Q ss_pred CCcccccccccce---------e--cc----hhcccchHHHHHHHHHhhcCcEEeecCCceecCcceeeeeeeCCCCCEE Q lcl|Aclame:pro 1 MADFSQTSFKGGV---------I--AP----RLQFNEYESAYHHSIEDAVNFVVTEQGSLITRCGSEEVGLCQDGEVRLF 65 (594) Q Consensus 1 m~~~~~~~f~~Ge---------~--sp----~l~~r~d~~~y~~~~~~~~N~~~~~~G~~~~rpg~~~~~~~~~~~~~~r 65 (594) -.+-.+-..+++| . .+ .-.+..+++....++....|-.. .--+.+..|..||-.....+ .. T Consensus 265 ~g~~y~i~i~~~~~~~~~~~~~~~~~~t~~d~~a~~~~~~~i~~~l~~~~~~~~--~~~~~~~g~~i~v~~~~~~~--~~ 340 (905) T protein:vir:78 265 NGRDYNIRVTQEEFVYTYASDGTAAHTTPQDSTAGTLDIGQITAGLVNSVNLIS--NYSAQAVGNVIEIERTDGRD--FN 340 (905) T ss_pred ccceEEEEEecceeEEEecCCCcccccCccCccCccccHHHHHHHHHHhhcccc--cEEEEecCcEEEEEecCCCc--cE Confidence 0000011111111 1 00 01223344444434333332111 11244455555553332110 11 Q ss_pred EEEEEeCCCceEEEEEeC-----CeEEEEeCCceEEecc--cccccccceeeccc-chhh--hcccee--EecCcEEEEe Q lcl|Aclame:pro 66 RLPAVDAPSNDVIVEVGN-----TNIAVWVNDVRQVVAN--TPSEWRNTIDRIQT-AYDT--IGDDAG--AANTGRLIMV 133 (594) Q Consensus 66 lipF~~s~~q~y~le~g~-----~~~r~~~~~~~~~~~~--~~~~~~~~~~~tpy-ta~~--l~~i~~--aq~adv~~~v 133 (594) |-........-+-.+.+ ..+-.-...+..+... ...+...+. .-| ++.. -.+..| +...++.+-+ T Consensus 341 -~~~~~g~~~~~~~~~~~~v~~~~~Lp~~~~~g~~v~v~~~~~~~~d~yy--v~~~~~~~~~~~~~~W~E~~~~~~~~~~ 417 (905) T protein:vir:78 341 -LGVRGGATNRAMTAIKGTANSIVDLPGQCFDGFELKVINTENAESDDYY--VVFRSAAEGIPGSGSWEETVAPGIERGF 417 (905) T ss_pred -EEEeccCCcceEEEEeccccccccCccccCCCcEEEEEeCCCCCcceEE--EEEEecccCCcCceeEEEeccccccccc Confidence 11111111110000100 0000011111111111 001100000 001 0101 112234 3345788889 Q ss_pred cCCccceeEEeeccCceeecccc-------cceeeeccc--------cCCcceEEEEEeceEEEEeCCCCCcEEEEEecc Q lcl|Aclame:pro 134 HPALQPKRLYRDNNNAWQFVNMH-------TGAVPAEWS--------PSNYPQTVGIFQNRVWYVGSPVHRTYFWATRAG 198 (594) Q Consensus 134 ~~~~~p~~L~R~~~~~w~~~~~~-------~~~~p~~~~--------~~g~Ps~v~f~~~RL~~~~~~~~p~~v~~S~~g 198 (594) ++++||++|+|.+++.|.+.... |+.+..+++ .+++|++|+||||||+|++ |++|||||+| T Consensus 418 ~~~tmp~~l~r~~~g~f~~~~~~~~~~~~~~~~r~~Gd~~Tnp~psf~g~~is~v~f~q~RL~f~s----~~~v~~Srtg 493 (905) T protein:vir:78 418 NTSTMPHALIRQADGNFTLEALNDEGTITGWAQREVGDDDTNPKPSFVGRGISDMFFYNNRLGFLS----EDAVIMSQPG 493 (905) T ss_pred ccccccEEEEEecCceEEEEEeccccccccccccccCCcccCCCCcccCCCcceEEEEcceEEEec----CCeEEEEccC Confidence 99999999999999999999887 777766654 3346678899999999998 5789999999 Q ss_pred ccccccccccC--CCCccEEEEE-cCCccEEEE-EEcCCCEEEEecCcEEEEecCCCcccCcceeEEEeeeeccc-CCcc Q lcl|Aclame:pro 199 KLEDIAPSTAN--NPNDPISFVG-IMEGTPCWI-IASSDVLTIGTTINDYQLAASTGVSVTAATAILRRSSVQGT-AAVQ 273 (594) Q Consensus 199 d~~nF~~~t~~--~d~d~i~~~~-s~~~~~i~~-~~~~~~L~l~t~~~q~~l~~~~~~~lTP~~~~~~~~s~~g~-~~~~ 273 (594) |||||++++++ .|||||++++ +++.+.|.| ++++++|+|||+++||+|++++ .+|||+|++++++|.+++ +.|+ T Consensus 494 d~~nF~~~t~~~~~DdDpI~~~~ss~~~~~i~~~v~~~~~L~ifT~g~ef~lsg~~-~~lTP~s~~i~~~S~~~~~~~v~ 572 (905) T protein:vir:78 494 DYFNFFVTSAITISDSDPIDVTASSTKPAILRAAIGAPKGLILFAENSQFLLASQE-VVFSTATIKLTEISDYFYRSLAK 572 (905) T ss_pred CccccccccccCCCCCccEEEEEcCCcceeeEEEeecCCcEEEEecCceEEEecCC-ccccceeEEEEeEEeecccCCCC Confidence 99999999865 4999999954 566677655 6778999999999999999864 579999999999998775 5799 Q ss_pred cEEeCCeEEEEEcCCC--EEEEEEeeecccceeecchhhhhhhhhcccccccCCceEEEEEeCCCCeEEEEEcCCCeEEE Q lcl|Aclame:pro 274 GIPAEEQVIFCSRNKS--KVYAMNYVREQDNWIPDEMSSQAQHLFTPISSAKGASVRRVAYISDAAKSLWVVLENGQINY 351 (594) Q Consensus 274 Pv~~g~~v~F~~~~g~--~v~e~~~~~~~d~~~~~dls~~a~hl~~~~~~~~~~~i~~~a~~~~p~~~~~~~~~dg~~~~ 351 (594) |+.+|++++|++++|+ +||||.|++++|+|.++|+|+|++||+. +++ .++++++|++++|+.++||++++ T Consensus 573 Pv~vG~~vlFv~~~g~~s~vre~~y~~~~d~y~a~DlT~~a~hl~~-------g~v-~~~~~s~~~~~v~~~~~~~~l~~ 644 (905) T protein:vir:78 573 PVSTGVSIAFVSEADTYSKIFEMSIDSVDNRPQVADITRIVPEYVP-------TGL-TWSVSTPNNSMMLFGDNSNTAYI 644 (905) T ss_pred cEEeCCeEEEeecCCCeeEEEEEEeeecccceehhHHHHHHHHhcC-------Cce-EEEEecCCCcEEEEEcCCCeEEE Confidence 9999999999999985 5999999999999999999999999984 444 46677889999999999999999 Q ss_pred EEEe---cccceEeEEEeecCCCeEEEEEEEccCCCCEEEEEEEECCCCCcceeEEEEEeccCcc---cccce------- Q lcl|Aclame:pro 352 CCFD---RTTDTKAWTQLELSGGKVIDIAAAFNPDSDYAYVAVVRSKAINGVQKNYTVLEKISSP---RTDWK------- 418 (594) Q Consensus 352 ~ty~---~eq~v~aW~~w~~~~g~v~~v~~~~~~~~d~~y~~v~r~~~~~g~~~~~~~le~~~~~---~~~~~------- 418 (594) |+|+ +||+|+|||||++ +|.++.||++ .|.+|++|+|. ++|..+++ +|+|... ...+. T Consensus 645 ytyl~~~~eq~v~AWsrw~~-~G~~~~~a~i----~d~~~~vV~r~--~~G~~~~~--~~~l~~~~~~~~~d~~~~~~~~ 715 (905) T protein:vir:78 645 FKFFNQGNERQVAGWSKWIL-PGEQRMCGFF----ADTGYFVLYDS--TTGSYVLS--AMELLDDPDSASIDTAFSSFLP 715 (905) T ss_pred EEeecCCCceeEEeEEEEec-CCCeEEEEEE----cCCEEEEEEEc--cCCeEEEE--EEeeccccCccccccceeeeee Confidence 9985 7889999999998 7888888887 46789998884 56776665 4554221 11111 Q ss_pred eeeeeEEc-cCcc--------cc-cccCCcccCceeEEEEeCCeeccCeEe---cCCceEEEEecCCCCCeEEEeEeeee Q lcl|Aclame:pro 419 RADGWVVA-QVNQ--------NG-DVLNLDRYIGRTAVIFSKYGLEAEVEV---NNIGLTHRINGYDPNTVYYVGYKMDS 485 (594) Q Consensus 419 ~~~~~~~~-~~~~--------~~-~~~~l~~l~g~tv~i~adg~~~~~~~v---~~~~~tl~~~~~~~~~~v~VG~~y~~ 485 (594) +.+++... ...+ .. ...++.|++++.+.+.+||...+.... .++..+ ..++++|+||++|++ T Consensus 716 ~~d~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~~~~~~~~~~~~~t-----~~~a~~v~VGl~Y~s 790 (905) T protein:vir:78 716 RLDNYVVKSDLTVVDNGDGTLTVDLEAGQAMTGATPVIMFTDGPSEFAFSQPTITAGQFT-----VDTTDDFVVGFKYET 790 (905) T ss_pred ccceeeecccceecccCcceEeeeccCccccccceeEEEeeCCceeeeEEEEEeeceeec-----cccCCeEEEeeeeeE Confidence 12222211 1111 11 124556777777778889876554432 222222 346788999999999 Q ss_pred EEEecceeeeCCCCccceeeEEEEEEEEEEEcccceEEeeeeccccccccccccccc---cCCCccccccCcEEEEeecC Q lcl|Aclame:pro 486 YFRTLTPSNGDMKKSMFGSKIRISKVQLALFDSIEPTVNGEPADDRSTDDIMDARLL---DFSSNSGSSNGTRLVDYNPL 562 (594) Q Consensus 486 ~v~~~~~~~~~~~g~~~~~~~ri~~v~v~l~~S~g~~v~~~~~~~~~~~~~~~~~~~---~~~~~~~~~tg~~~v~~~~~ 562 (594) +++++|++++.++++.+++++||+|+.||+.+|+++.++.+........+....+.. ...+.+.+.+|++++|+ . T Consensus 791 ~v~~~p~~~~~~~~s~~~~~~rI~rv~lr~~~Sg~~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~p~~~tg~~~vP~--~ 868 (905) T protein:vir:78 791 KITLPGFFTSEENKADRVYAPIVEFLYLDLYYSGRYQIEVDRIGYDTINIDAGSIDANIYLADGAPLKEIATENVPL--F 868 (905) T ss_pred EEeecceEeccCCCcccccceEEEEEEEEeecceeEEEEEcCCCcceecccccceecCcccCcccccccccEEEEEe--e Confidence 999999999999999999999999999999999999997654332222221111111 22355667788888765 5 Q ss_pred CcCcceEEEEEECCCcCEEEEEEEEEEEeccC Q lcl|Aclame:pro 563 GWENDGKMVIAVEQPFLCEVVGVFSVVQSNKV 594 (594) Q Consensus 563 g~~~~~~v~I~~~~P~P~tIlai~~~v~~n~~ 594 (594) +|+++.+|+|+|++|+||+||||.+|...|+= T Consensus 869 g~~~~~~v~I~sd~PlP~tvlsi~weg~Yn~r 900 (905) T protein:vir:78 869 TPGDQVTVTIKAPDPFPSAITGYSWQGHYNRR 900 (905) T ss_pred ccCceeEEEEEECCCCcEEEEEEEEEEEeccc Confidence 89999999999999999999999999999997 No 25 >protein:vir:1778 Length: 680 # NCBI annotation: tail protein A # Family: family:all:825 # MgeID: mge:38 # MgeName: P60 # Cross-refs: genbank:acc:NP_570344;genbank:gi:18640503;genbank:GeneID:932716 Probab=100.00 E-value=6e-66 Score=378.14 Aligned_cols=354 Identities=12% Similarity=0.062 Sum_probs=224.3 Q ss_pred CC---------cc----------cccccccceecchh--cccchHHHHHHHHHhhcCcEEeecCCceecCcceeeeeeeC Q lcl|Aclame:pro 1 MA---------DF----------SQTSFKGGVIAPRL--QFNEYESAYHHSIEDAVNFVVTEQGSLITRCGSEEVGLCQD 59 (594) Q Consensus 1 m~---------~~----------~~~~f~~Ge~sp~l--~~r~d~~~y~~~~~~~~N~~~~~~G~~~~rpg~~~~~~~~~ 59 (594) .. +| ...+.++.--.|-- .+..+.+.....|+.+.|-. +.--+.+..++.|+..... T Consensus 261 t~~v~~~G~~y~IsI~~~~~~~~~~~~~s~~~~t~~~~~a~~at~~~Ia~~L~~~i~~~--~~~~~~~~g~~i~i~~~~~ 338 (680) T protein:vir:17 261 TIRVDVSGEGWDIKVTKQIQSKVYANLGTAQFTTPVDQSGGGASTSDIVTGLSAAINGL--GTFTAESIGNVIRVRYSDP 338 (680) T ss_pred eEEEecccceeEEEEccceeeEeccCccceeeeeccCCcccceeHHHHHHHHHHhhccc--CcEEEEECCCEEEEEeccC Confidence 00 00 01111111111110 12223334444444432221 0001234444444433221 Q ss_pred CCCCEEEEEEEeCCCc----eEEEEEeCC-----eEEEEeCCceEEecc--cccccccceeecccch-----hhhcccee Q lcl|Aclame:pro 60 GEVRLFRLPAVDAPSN----DVIVEVGNT-----NIAVWVNDVRQVVAN--TPSEWRNTIDRIQTAY-----DTIGDDAG 123 (594) Q Consensus 60 ~~~~~rlipF~~s~~q----~y~le~g~~-----~~r~~~~~~~~~~~~--~~~~~~~~~~~tpyta-----~~l~~i~~ 123 (594) . .-.-|..++.. +.+-.+.+. .+-.-.+.+..+... ...+...+- --|.+ ..-..-.| T Consensus 339 ~----~~~~~~~~~~~g~~~~~~~~~~~~v~~~~~Lp~~a~~g~~v~v~~~~~~~~~~Yy--v~~~~~~~~~~~~~~~~W 412 (680) T protein:vir:17 339 T----RTDEFTMSARGGTSGTGLESIKYSVDTLAELPTKCWNDYQVAVRNTQDTEVDDYY--VKFETDVEDADVPGSGYW 412 (680) T ss_pred C----CceEEEeeccCCCCceeeeeeeeeeccccccccccCCCcEEEEEeCCCCcccceE--EEEeccCcccCcccccce Confidence 1 11111111110 111111110 000011112121111 111111000 01111 01112234 Q ss_pred Ee--cCcEEEEecCCccceeEEeeccCceeecccc-------cceeee----------ccccCCcceEEEEEeceEEEEe Q lcl|Aclame:pro 124 AA--NTGRLIMVHPALQPKRLYRDNNNAWQFVNMH-------TGAVPA----------EWSPSNYPQTVGIFQNRVWYVG 184 (594) Q Consensus 124 aq--~adv~~~v~~~~~p~~L~R~~~~~w~~~~~~-------~~~~p~----------~~~~~g~Ps~v~f~~~RL~~~~ 184 (594) .+ ..++.+-...++||++|+|.+++.|.+.... |..+.. |.+.++||++|+||||||+|++ T Consensus 413 ~E~~~~~~~~~~~~~tmp~~l~r~~~g~f~~~~~~~~~~~~~~~~r~~Gdd~tnp~psF~~~G~~p~~v~f~q~RL~f~s 492 (680) T protein:vir:17 413 VETVKNGDDGGLVDDTMPHVLVRNALGDFTFSSLNNSSYGKTWADRSVGSEDTNPHPTFTESGNGIYGMFMYKNRLGFLT 492 (680) T ss_pred eecccCcccceeccCcceEEEEEccCceeEEEeeccccccccccccccCCcccCCCcccccCCCCceEEEEEcceEEEee Confidence 33 3467777888999999999999999888875 554433 2234568999999999999997 Q ss_pred CCCCCcEEEEEeccccccccccccC--CCCccEEEEE-cCCccEEE-EEEcCCCEEEEecCcEEEEecCCCcccCcceeE Q lcl|Aclame:pro 185 SPVHRTYFWATRAGKLEDIAPSTAN--NPNDPISFVG-IMEGTPCW-IIASSDVLTIGTTINDYQLAASTGVSVTAATAI 260 (594) Q Consensus 185 ~~~~p~~v~~S~~gd~~nF~~~t~~--~d~d~i~~~~-s~~~~~i~-~~~~~~~L~l~t~~~q~~l~~~~~~~lTP~~~~ 260 (594) |++|||||+||||||++++++ .|||||++++ +++.+.|. +++++++|+|||+++||+|+++ +++|||+|+. T Consensus 493 ----~~~v~~Srtgd~~nF~~~t~~~~~DdD~I~~~~ss~~~~~i~~~v~~~~~L~l~t~g~q~~ls~~-~~~lTP~~~~ 567 (680) T protein:vir:17 493 ----QDAVIMSQVGDYFNFYATSGVTISDADPIDMATSDTKPVKLEAAISSTSGAILFGNQAQFRLSSP-DESFGPKTAT 567 (680) T ss_pred ----CCeEEEEccCCcccccccccccCCCCccEEEEEcCCcceeeeEEeecCCcEEEEecCeEEEEecC-CceecceeEE Confidence 578999999999999999865 5999999955 55566665 5667899999999999999876 4589999999 Q ss_pred EEeeeecc-cCCcccEEeCCeEEEEEcCCC--EEEEEEeeecccceeecchhhhhhhhhcccccccCCceEEEEEeCCCC Q lcl|Aclame:pro 261 LRRSSVQG-TAAVQGIPAEEQVIFCSRNKS--KVYAMNYVREQDNWIPDEMSSQAQHLFTPISSAKGASVRRVAYISDAA 337 (594) Q Consensus 261 ~~~~s~~g-~~~~~Pv~~g~~v~F~~~~g~--~v~e~~~~~~~d~~~~~dls~~a~hl~~~~~~~~~~~i~~~a~~~~p~ 337 (594) ++++|.++ ++.|+|+.+|+.++|++++|+ +||||.|++++|+|+++|+|++++||++ +..+..++++++|. T Consensus 568 i~~~s~~~~~~~~~Pv~vG~~v~Fv~~~g~~s~vre~~y~~~~d~y~a~DlT~~a~hl~~------g~v~~~~~~~~~~~ 641 (680) T protein:vir:17 568 LDKISNYTYESKADPVQTGVSMIFPTNMGTYSSVYELSTESAKGTPVIEDSSRVIPRLIP------SGLTWSTASMNNDT 641 (680) T ss_pred EEEEEeecccCCCCceEeCCeEEEeecCCCcceEEEEeeeeccCceehhhHHHHHHHhcC------CceEEEEeeCCCCe Confidence 99999875 468999999999999999985 7999999999999999999999999985 23334457888888 Q ss_pred eEEEEEcCCCeEEEEEEe---cccceEeEEEeecCCCeE Q lcl|Aclame:pro 338 KSLWVVLENGQINYCCFD---RTTDTKAWTQLELSGGKV 373 (594) Q Consensus 338 ~~~~~~~~dg~~~~~ty~---~eq~v~aW~~w~~~~g~v 373 (594) .++|+.++||.+++|+|+ +||+|+|||||+|+++-- T Consensus 642 ~~~~~~~~~~~l~~~~yl~~~~e~~v~aW~rw~~~~~d~ 680 (680) T protein:vir:17 642 VFFGNAKKGRNVYVFRFFNEGQERKVAGWTTWYYEDQDH 680 (680) T ss_pred EEEEEEcCCCEEEEEEEeeCCCceEEEEEEEEecCCCCC Confidence 999999999999999997 889999999999965411 No 26 >protein:vir:94602 Length: 1012 # NCBI annotation: PfWMP4_35 # Family: family:all:12083 # MgeID: mge:1525 # MgeName: Pf-WMP4 # Cross-refs: genbank:acc:YP_762665;genbank:gi:115304373;genbank:GeneID:5142302 Probab=99.55 E-value=2.9e-14 Score=94.82 Aligned_cols=567 Identities=14% Similarity=0.130 Sum_probs=266.6 Q ss_pred CCcccccccccceecchh---cccchHHHH---HHHHHhhcCcEE--eecCCceecCccee----eeeeeCCCCCEEEEE Q lcl|Aclame:pro 1 MADFSQTSFKGGVIAPRL---QFNEYESAY---HHSIEDAVNFVV--TEQGSLITRCGSEE----VGLCQDGEVRLFRLP 68 (594) Q Consensus 1 m~~~~~~~f~~Ge~sp~l---~~r~d~~~y---~~~~~~~~N~~~--~~~G~~~~rpg~~~----~~~~~~~~~~~rlip 68 (594) -+|+-.+-..+---+|.- +|=.|=.+| .-+...-.|.-| .-.||. |.||.- |..+ +.|-+- T Consensus 289 ss~F~~~~~~~~T~~P~~AD~YG~~~G~~~tpp~~~~~A~L~~aPFF~TFG~~--~s~TP~P~~~V~iL-----R~RELR 361 (1012) T protein:vir:94 289 SSRFDSNGWAGPTTSPNTADEYGFSGGGRFTPPSLVPGATLQAAPFFITFGGI--YSGTPTPINQVNIL-----RLRELR 361 (1012) T ss_pred eeeecCceeecCCCCCCCcccccccCCceeccccccccceeeccceEEEeccc--cCCCCCChhheeee-----eeeeee Confidence 122211111111122221 122222222 111111111111 123333 222211 1111 122233 Q ss_pred EEeCCCceEEEEEeCCeEEEEeCCceEEeccccccccccee-ecccchhhhc-cc-----eeEecCcEEEEec------C Q lcl|Aclame:pro 69 AVDAPSNDVIVEVGNTNIAVWVNDVRQVVANTPSEWRNTID-RIQTAYDTIG-DD-----AGAANTGRLIMVH------P 135 (594) Q Consensus 69 F~~s~~q~y~le~g~~~~r~~~~~~~~~~~~~~~~~~~~~~-~tpyta~~l~-~i-----~~aq~adv~~~v~------~ 135 (594) |...++ -.+..+|++.+++.......+........ .+-|++.+-. .+ .-+.+|. ++.+- | T Consensus 362 FN~G~G------A~~~~L~V~~D~~~~t~Nnvpfspsnfqt~atT~~~T~R~~~L~~A~G~~~~~A~-Y~A~~GATnnlp 434 (1012) T protein:vir:94 362 FNGGTG------AKPDDLQVYNDTVEHTWNNVPFSPSNFQTWATTYTATDRVITLMSAVGDRFNNAN-YFAILGATNNLP 434 (1012) T ss_pred eccCCC------CCCcceEEEEcceeeeccccccCcccccceeeeeeecceeEEEeeeccccccCcc-eEEEeecccccc Confidence 322222 12346788888887776655544333222 1333333211 00 0011111 11111 1 Q ss_pred CccceeEEeeccC--------ceeecccccc-------------eeeeccccCCcceEEEEEeceEEEEeCCCCCcEEEE Q lcl|Aclame:pro 136 ALQPKRLYRDNNN--------AWQFVNMHTG-------------AVPAEWSPSNYPQTVGIFQNRVWYVGSPVHRTYFWA 194 (594) Q Consensus 136 ~~~p~~L~R~~~~--------~w~~~~~~~~-------------~~p~~~~~~g~Ps~v~f~~~RL~~~~~~~~p~~v~~ 194 (594) ...|.-|...+.. .|.-.-.+.. +...-.+.+.+|+..+.||.||++.+..+.|..+.+ T Consensus 435 anaPL~IS~~sA~s~~~~~R~v~~~~~~T~~~~~~G~Y~r~YGiG~~~~Y~~~~F~~I~TiY~~RLiL~~~s~~~~~~~~ 514 (1012) T protein:vir:94 435 ANAPLHISCLSASSYLGGSRRVWYRNLPTTGGTLDGCYVRAYGIGKYVDYSKRSFHAIGTIYRDRLILVNPSTATDQLLI 514 (1012) T ss_pred cCCccccccccceeeeccceeeeeeccccCCceEeeeEEEEEEeeeeeecCCccccceeeeeeeeeEEeccCCCcceEEE Confidence 2223322222211 1111111100 011112455689999999999999999999999999 Q ss_pred Eeccc------ccccccccc-CC--CCccEEEEEcCC-ccEEE-EEEcCCCEEEEecCcEEEEecCCCcccCcceeEEEe Q lcl|Aclame:pro 195 TRAGK------LEDIAPSTA-NN--PNDPISFVGIME-GTPCW-IIASSDVLTIGTTINDYQLAASTGVSVTAATAILRR 263 (594) Q Consensus 195 S~~gd------~~nF~~~t~-~~--d~d~i~~~~s~~-~~~i~-~~~~~~~L~l~t~~~q~~l~~~~~~~lTP~~~~~~~ 263 (594) |.+|| |+||+.-+. ++ |+||.++..+++ ..-|. .+..++.|++||..+-|.+.|+ +.++|..-.++. T Consensus 515 S~~GD~~~~G~~Y~F~QiTD~L~G~~tDPF~L~VtSe~~e~iT~~~~WQ~~LFV~T~~~T~~~~GG--e~~~~s~~~VN~ 592 (1012) T protein:vir:94 515 SEIGDATVPGEFYQFMQITDMLQGVTTDPFTLNVTSEGRERITAVTGWQKRLFVFTGSNTYSIEGG--EQFGESSYAVNL 592 (1012) T ss_pred eecCCcccCceeeeeeeeehhhccCcCCceeEEEcccccceeeeeeeeceeEEEEeccceEeeccc--cccchhHHHHHh Confidence 99876 899998764 33 899999865444 44454 4567999999999999999874 469999999999 Q ss_pred eeeccc-CCcccEEeCCeEEEEEcCCCEEEEEEeeecccceeecchhhhhhhhhcccccccCCceEEEEEeCCCCeEEEE Q lcl|Aclame:pro 264 SSVQGT-AAVQGIPAEEQVIFCSRNKSKVYAMNYVREQDNWIPDEMSSQAQHLFTPISSAKGASVRRVAYISDAAKSLWV 342 (594) Q Consensus 264 ~s~~g~-~~~~Pv~~g~~v~F~~~~g~~v~e~~~~~~~d~~~~~dls~~a~hl~~~~~~~~~~~i~~~a~~~~p~~~~~~ 342 (594) +|.+|. +.---|+....|+|.++.| +.++...-+.|+|.+.+-|+.+..+|+...+....+..+|.|.++.+. +++ T Consensus 593 vSt~G~~N~~~VV~T~~~V~Ym~~~G--~F~L~~k~~~~~Y~A~ErSvKIR~~F~~~~~ss~~~~~Wl~~~e~~~~-LYi 669 (1012) T protein:vir:94 593 VSTYGAFNQNCVVVTNLTVLYMNKFG--LFDLMNKPNTDSYGAFERSVKIRGLFQNLAGSSGDNLHWLRYNESSNK-LYI 669 (1012) T ss_pred HHhhcccCcceEEEeeeEEEEeeccc--eeeccCCccCCcchhhhhhhhhhhhhhhhccccccceeeeeeccCCce-EEE Confidence 999996 5555677889999999888 999999999999999999999999999988888888888888888554 444 Q ss_pred EcC-CCe--EEEEEEecccceEeEEEeecCCCeEE--------------------EEEEEccCCCCEEEEEEEECC---- Q lcl|Aclame:pro 343 VLE-NGQ--INYCCFDRTTDTKAWTQLELSGGKVI--------------------DIAAAFNPDSDYAYVAVVRSK---- 395 (594) Q Consensus 343 ~~~-dg~--~~~~ty~~eq~v~aW~~w~~~~g~v~--------------------~v~~~~~~~~d~~y~~v~r~~---- 395 (594) -+. .|+ ...-.|+-.---.+|+..+..++... -||.+.-...-.+-+...|.. T Consensus 670 ~L~~~~dT~~~S~~~~~N~~~DSWs~~~s~~~Fq~YP~V~~~~~~t~L~~i~~~~TV~ML~~~~~~YiDFatirthiypF 749 (1012) T protein:vir:94 670 GLAAEGDTRTTSRNLMLNFTWDSWSTLSSAAPFQMYPAVQLFKYMTWLTNINAPLTVAMLATEMPFYIDFATIRTHIYPF 749 (1012) T ss_pred EecCCCcchhhhhhhhhhhhhcchhhhhccCCcccchhhhhhhhhhhhhhhcCchhhhhhhhccceeeeeehhcccccce Confidence 333 222 22111111111136776665444210 011110000000000000000 Q ss_pred CCC-ccee---------EEEEEeccCcccccceeeeeeE-----------Ecc-----------CcccccccCC-cccCc Q lcl|Aclame:pro 396 AIN-GVQK---------NYTVLEKISSPRTDWKRADGWV-----------VAQ-----------VNQNGDVLNL-DRYIG 442 (594) Q Consensus 396 ~~~-g~~~---------~~~~le~~~~~~~~~~~~~~~~-----------~~~-----------~~~~~~~~~l-~~l~g 442 (594) +-+ |+.. .| -+.....|-..+....+.. +.. +.+..++--| +.-+| T Consensus 750 ~~CaG~~~~~Vms~~~GIY-~~~~P~tP~I~~~tit~ss~~~~k~Yq~~T~~~GT~tLt~~~~~~~~~~~l~LL~~~~~~ 828 (1012) T protein:vir:94 750 TFCAGQRDVSVMSDSRGIY-NLPLPVTPGILDYTITASSKAGAKTYQRNTASAGTETLTLRNPMMDYADTLELLGGNVNA 828 (1012) T ss_pred eeeccceeeEEEecCCceE-EecccccceeeeeEeeccchhhhheeccccccccceeeeecChhhhcCcEEEEecCCCCc Confidence 000 0000 00 0000001100000000000 000 0001111001 12245 Q ss_pred eeEEEEeCCeeccC---------------eEec-CCceEEEEecCCCCCeEEEeEeeeeEEEecceeeeCCCCccceeeE Q lcl|Aclame:pro 443 RTAVIFSKYGLEAE---------------VEVN-NIGLTHRINGYDPNTVYYVGYKMDSYFRTLTPSNGDMKKSMFGSKI 506 (594) Q Consensus 443 ~tv~i~adg~~~~~---------------~~v~-~~~~tl~~~~~~~~~~v~VG~~y~~~v~~~~~~~~~~~g~~~~~~~ 506 (594) +++.++-....... -++. +.+++.+-.+ ..+..+++|.-|.+.+..+-+.+ .+.++-| T Consensus 829 ~~~a~V~~~~~~~~TT~~TV~~N~~~~lQ~T~~~GS~L~~~~~L-sqN~~~~~G~~Y~S~Y~SP~F~L-----~SL~~LK 902 (1012) T protein:vir:94 829 SQFAMVMSNGFEPYTTYPTVTYNGVAPLQWTVTGGSGLNNRPIL-SQNNNCIMGMIYPSVYASPIFDL-----ESLGRLK 902 (1012) T ss_pred cEEEEEeecccccccccceEEecceeeeeEEEecCCcccccccc-ccCceEEEeecchhhhcchhhhh-----hhhhhhh Confidence 66665532221111 1111 1111111001 11456889999999888766544 3467777 Q ss_pred EEEEEEEEEEcc--cceEEeeeecccc---ccccccccccccCC------------CccccccCcEEEEeecCCcCcceE Q lcl|Aclame:pro 507 RISKVQLALFDS--IEPTVNGEPADDR---STDDIMDARLLDFS------------SNSGSSNGTRLVDYNPLGWENDGK 569 (594) Q Consensus 507 ri~~v~v~l~~S--~g~~v~~~~~~~~---~~~~~~~~~~~~~~------------~~~~~~tg~~~v~~~~~g~~~~~~ 569 (594) |+.++.+.+.-+ ..++.+... ++. .....+..-...++ |......-.++..++.-|+.-+.+ T Consensus 903 r~K~~~L~~Dttvtsqlkynlts-gfsqvsvlntawvavvsnynenivpavvsyqvgnsyeirrvvelsiplqgygcdyq 981 (1012) T protein:vir:94 903 RLKKLHLQMDTTVTSQLKYNLTS-GFSQVSVLNTAWVAVVSNYNENIVPAVVSYQVGNSYEIRRVVELSIPLQGYGCDYQ 981 (1012) T ss_pred heeeeeEEeeeeeeeeeeeehhc-ccceeeeecceeeeeeeccCccccceeeeeecCCceeeeEEEEEeeccccccccee Confidence 888887776543 223332110 000 00000111111111 111111122334444456666677 Q ss_pred EEEEECCCcCEEEEEEEEEEEeccC Q lcl|Aclame:pro 570 MVIAVEQPFLCEVVGVFSVVQSNKV 594 (594) Q Consensus 570 v~I~~~~P~P~tIlai~~~v~~n~~ 594 (594) +.|.+-.--.+.+-+-..+++--.= T Consensus 982 fyiasvgaeafklaayefdiqpqrd 1006 (1012) T protein:vir:94 982 FYIASVGAEAFKLAAYEFDIQPQRD 1006 (1012) T ss_pred Eeeeeccccceeeeeeeeccccchh Confidence 7777766666666554443322211 No 27 >protein:vir:2625 Length: 715 # NCBI annotation: gp27 # Family: family:all:5234 # MgeID: mge:55 # MgeName: SIO1 # Cross-refs: genbank:acc:NP_064766;genbank:gi:9964636;genbank:GeneID:1263056 Probab=99.52 E-value=2.2e-12 Score=84.52 Aligned_cols=540 Identities=15% Similarity=0.068 Sum_probs=259.5 Q ss_pred CCcc-c---cccccccee---cchhcccchHHHHHHHHHhhcCcEEeecCCceecCccee-----eeeeeCCC------- Q lcl|Aclame:pro 1 MADF-S---QTSFKGGVI---APRLQFNEYESAYHHSIEDAVNFVVTEQGSLITRCGSEE-----VGLCQDGE------- 61 (594) Q Consensus 1 m~~~-~---~~~f~~Ge~---sp~l~~r~d~~~y~~~~~~~~N~~~~~~G~~~~rpg~~~-----~~~~~~~~------- 61 (594) |++- . -+.|-+|=| ||.-++ +++.-.-+||.+...|--.||-|+-+ +..+--++ T Consensus 1 m~~~~~~~~vNtFv~GliTEas~ltfp-------qnasiDe~N~~l~rdG~r~RR~g~~~E~~~vls~~~vp~galv~~~ 73 (715) T protein:vir:26 1 MPQSLTQRTVNTFIKGLITEASELTFP-------ENASVDELNCSLGRDGTRRRRKAVTLEDNHVLSDVVVPEGALVQTL 73 (715) T ss_pred CCcccchhHHhhhhhheeeccccccCC-------ccceeeeeeeeecCCCcchhhccceeecceEEEEEeecCceeeeee Confidence 9873 3 456767744 455444 45666779999999999999999764 22221111 Q ss_pred --------CCEEEEEEEe---------CC----CceEEE--E-----------EeCCeEEEEeCCceEEeccccccccc- Q lcl|Aclame:pro 62 --------VRLFRLPAVD---------AP----SNDVIV--E-----------VGNTNIAVWVNDVRQVVANTPSEWRN- 106 (594) Q Consensus 62 --------~~~rlipF~~---------s~----~q~y~l--e-----------~g~~~~r~~~~~~~~~~~~~~~~~~~- 106 (594) +....+=|+. ++ +..|.+ . ..|..+.+..-+|.+..+....+.-. T Consensus 74 ~W~na~G~v~~~~livqvg~~l~f~q~t~~pLs~~n~~~svdl~~~~~~vn~SPsh~~v~v~~~~G~livanp~i~~~~~ 153 (715) T protein:vir:26 74 DWYNVAGQVNLEFLVVQVNNILYFYEKSTDPLSANKYSGSVDLNTHSASNNLSPSEERVQVTSLNGYLIVASPAINTFYL 153 (715) T ss_pred chhhcccccCcEEEEEEeccEEEEEeccCCccccCceeEEeeecceecccccccceeEEEEEEeeeEEEEecCCccEEEE Confidence 1111111222 11 112211 0 11112222222233322221111100 Q ss_pred ---------ce-------e-----ecccch----------------hhhccceeEecCcE-------EEEecCCccce-e Q lcl|Aclame:pro 107 ---------TI-------D-----RIQTAY----------------DTIGDDAGAANTGR-------LIMVHPALQPK-R 141 (594) Q Consensus 107 ---------~~-------~-----~tpyta----------------~~l~~i~~aq~adv-------~~~v~~~~~p~-~ 141 (594) +. + .+|+.. .++-+.-|+.-.++ .|++.|++... - T Consensus 154 ~~d~~t~s~t~~~ll~r~r~f~~qg~d~~~g~~y~~~gt~~tn~~iynlyN~gw~~p~gt~~~N~~~~yiVypa~s~~~~ 233 (715) T protein:vir:26 154 GFNTSTEAFTATSISFKERDFEWQGSDVDVTSLYFGEGTSVSNQRIYDTYNVGWVGPKGSAALNTYGSYIVYPALTHPWY 233 (715) T ss_pred EecCCcceeEeeEEEEEeeeheeeccccccccccccCCcccCchhheecccceeecceeEEEEcCCCCceEecccccccC Confidence 00 0 011110 11111222222222 23444333221 1 Q ss_pred EEeeccCceeecccccceeeecc-----------------------ccCCcceEEEEEeceEEEE---eCCCCCcEEEEE Q lcl|Aclame:pro 142 LYRDNNNAWQFVNMHTGAVPAEW-----------------------SPSNYPQTVGIFQNRVWYV---GSPVHRTYFWAT 195 (594) Q Consensus 142 L~R~~~~~w~~~~~~~~~~p~~~-----------------------~~~g~Ps~v~f~~~RL~~~---~~~~~p~~v~~S 195 (594) --++++. .|.++.|..-.... -+.+.|++++.|.+|.+|+ +.+|.| .|.+| T Consensus 234 S~kd~n~--afsk~ad~ei~tGt~~~~~G~yi~D~~~~g~~~leeev~k~R~rsv~~yaGrV~yagiD~dkng~-rilfS 310 (715) T protein:vir:26 234 SGKDANG--AFNKADWLEIYTGSSLASNGHYVLDVFNKARTGLTTEVETGRFRSVAAYAGRVFYAGIDSAKNGG-KVYFS 310 (715) T ss_pred CCccccc--ccChhhccccccccccccCceEEEeeeecCCccchhhhhcCCCcceeeecceEEEeecccccCCC-eEEEe Confidence 1112222 22222221110000 0234678899999999999 466666 79999 Q ss_pred ec--------ccccccccccc----CCCCccEEEEEcCCccEEEEEEcCCCEEEEecCcEEEEecCCCcccCcceeEEEe Q lcl|Aclame:pro 196 RA--------GKLEDIAPSTA----NNPNDPISFVGIMEGTPCWIIASSDVLTIGTTINDYQLAASTGVSVTAATAILRR 263 (594) Q Consensus 196 ~~--------gd~~nF~~~t~----~~d~d~i~~~~s~~~~~i~~~~~~~~L~l~t~~~q~~l~~~~~~~lTP~~~~~~~ 263 (594) |. ..|.+=+|+++ +-|+|.-.+..-+.-++|.++.+++.|+||+.++.|+|.|.+ ...|.++..+.+ T Consensus 311 qLv~s~~di~nCyQd~DPTsee~~dLidTDGg~iri~gah~ii~Lv~f~~sLlvf~~NGVWAi~G~d-~g~tATdY~ltK 389 (715) T protein:vir:26 311 RLTERMSDVGNCYQVNDPTSEVLSDLLDTDGGVVRIPDAHNIRKLHVLGASLLVFAENGVWAVAGVD-NVFRATEYAITR 389 (715) T ss_pred hhhcchhhcccccccCCCchhhhhhhhhcCCCEEEecCCCCceeEEEecceEEEEEecceEEEeccC-CceeeeeeEEEE Confidence 84 45777777764 348888888888888999999999999999999999996654 579999999999 Q ss_pred eeecccCCcc-cEEeCCeEEEEEcCCCEEEEEEeeecccceeecchh-hhhhhhhcccccccCCceEEEEEeCCCCeEEE Q lcl|Aclame:pro 264 SSVQGTAAVQ-GIPAEEQVIFCSRNKSKVYAMNYVREQDNWIPDEMS-SQAQHLFTPISSAKGASVRRVAYISDAAKSLW 341 (594) Q Consensus 264 ~s~~g~~~~~-Pv~~g~~v~F~~~~g~~v~e~~~~~~~d~~~~~dls-~~a~hl~~~~~~~~~~~i~~~a~~~~p~~~~~ 341 (594) ++..||+.-+ =|++|+.++|+++.| |..+.-+..-..+++++|| ..++.+...++......+ .-.|.....++.| T Consensus 390 Is~vg~sspnSvVvv~~~i~~WsdtG--Iyal~~Nd~fn~~tAqNLTekTIq~~~~~I~~dk~knV-tg~fd~~e~rVyW 466 (715) T protein:vir:26 390 ISDVGLSNENSFVVADGIPIWWGKTG--IYAVQQSENLNTPTAQNLSLSTIQTLWNNISNAKKAQV-TVEYDKINQRVFW 466 (715) T ss_pred eeeeccCCCccEEEecceEEEeeCCc--EEEEEeccccCcchhhccchHHHHHHHhhcchhhhcce-EEEEEccCCEEEE Confidence 9999987654 467999999999888 8888766545679999999 477888877775544443 3357788899999 Q ss_pred EEcCCCeEEEEEEec----ccceEeEEEeecCCCe------EEEEEEEcc------------------CCCCEEEEEEEE Q lcl|Aclame:pro 342 VVLENGQINYCCFDR----TTDTKAWTQLELSGGK------VIDIAAAFN------------------PDSDYAYVAVVR 393 (594) Q Consensus 342 ~~~~dg~~~~~ty~~----eq~v~aW~~w~~~~g~------v~~v~~~~~------------------~~~d~~y~~v~r 393 (594) ++=+.-++.-+.|+. +-...|+.+|.+.+.. +-++. +++ .+++.+-.+..| T Consensus 467 ~yPn~dt~vdykyd~vLV~dLalgaFYp~~v~~~a~~~~~~ig~~~-~~~~~~~~t~~~vv~~~~v~~~g~~~~v~~~~r 545 (715) T protein:vir:26 467 FYPDNDESVDYKYNNILVMDLALQAFYPWRVEDEASSTSYIIGTSY-YGGLGSTSTETQVVNGADVVVNGSDNVVATLYR 545 (715) T ss_pred EEcCCceeeceeecCeEEEEecccccccccccccccccceeeeeee-eCCcccccchhheeccceEEEeccceEEEEeec Confidence 884433333233332 2223477777764321 00000 000 112233233333 Q ss_pred CCCCCcceeEEEEEeccCcccc---cceeeeeeEEccCcccccccCCcccCceeEEEEeCCeeccCeEec--CCceEEEE Q lcl|Aclame:pro 394 SKAINGVQKNYTVLEKISSPRT---DWKRADGWVVAQVNQNGDVLNLDRYIGRTAVIFSKYGLEAEVEVN--NIGLTHRI 468 (594) Q Consensus 394 ~~~~~g~~~~~~~le~~~~~~~---~~~~~~~~~~~~~~~~~~~~~l~~l~g~tv~i~adg~~~~~~~v~--~~~~tl~~ 468 (594) .- +-+.++ |..+||...+-. -..+.+.+++-+.. + .....+++....+++.-. ..-+|... T Consensus 546 ~~-~~~~~~-~~~~~~~~~~~~~~f~~~~~~~~~dw~s~--------d----~~~~~~~gy~~~gd~~~~k~~pyvt~~~ 611 (715) T protein:vir:26 546 DY-LEGDSE-IKLLVRDGTTGKMTFATFRGDTYLDWGSA--------D----YKSFAEAGYDFMGDITTFKNAPYVTTYM 611 (715) T ss_pred cc-ccccce-EEEEEEcCCceeEEEecccCceeeecccc--------c----hhhHHHhhhhhcccceeeecCceEEEEE Confidence 32 222222 334566554321 11122222221110 0 000011111111111100 00000000 Q ss_pred ecCCCCCeEEEeEeeeeEEEecceeeeCCCCcccee-eEEEEEEEEEEEcccceEEeeeeccccccccccccccccCCCc Q lcl|Aclame:pro 469 NGYDPNTVYYVGYKMDSYFRTLTPSNGDMKKSMFGS-KIRISKVQLALFDSIEPTVNGEPADDRSTDDIMDARLLDFSSN 547 (594) Q Consensus 469 ~~~~~~~~v~VG~~y~~~v~~~~~~~~~~~g~~~~~-~~ri~~v~v~l~~S~g~~v~~~~~~~~~~~~~~~~~~~~~~~~ 547 (594) +++- .=++.+..|=.-.+ .--+-.+..+..+| +.-+-|...++..... .+..-. T Consensus 612 -----------------~~te-dg~v~~~~g~~p~n~sSclm~~sw~ws~s--~st~~eaYk~~~~~~~---~p~~~s-- 666 (715) T protein:vir:26 612 -----------------RVTE-DGYVASGAGYEFINPSSCLMSVSWNLSKS--GSTPREIYKLKDVPVV---NPNDLS-- 666 (715) T ss_pred -----------------EEec-ccceeccCCccccCCcceEEEEEeeeccC--CCChhhhheecceeee---CCCccc-- Confidence 0000 00111111100000 00001111111222 1111111111100000 000000 Q ss_pred cccccCcEEE-EeecCCcCcceEEEEEECCCcCEEEEEEEEEEEeccC Q lcl|Aclame:pro 548 SGSSNGTRLV-DYNPLGWENDGKMVIAVEQPFLCEVVGVFSVVQSNKV 594 (594) Q Consensus 548 ~~~~tg~~~v-~~~~~g~~~~~~v~I~~~~P~P~tIlai~~~v~~n~~ 594 (594) .....++..+ .....|..+-.+++|++...-.++|++-.+-.--|.- T Consensus 667 ~~~yp~~~VvTKsriRG~Gr~~~~rf~s~~gKdlhl~Gysilg~~~~~ 714 (715) T protein:vir:26 667 SINYPTDTVVTKSKVRGRGRSMKFRFESVAGKDFHLVGYEVIGAKNNS 714 (715) T ss_pred cccCCcceeEeeeeeeccceEEEEEEEecCCcceEEEeEEEEecccCC Confidence 1111222222 1122366678899999999999999998776555544 No 28 >protein:vir:3133 Length: 911 # NCBI annotation: hypothetical protein # Family: family:all:5234 # MgeID: mge:64 # MgeName: VpV262 # Cross-refs: genbank:acc:NP_640315;genbank:gi:21234408;genbank:GeneID:956056 Probab=99.51 E-value=9.7e-13 Score=86.45 Aligned_cols=503 Identities=14% Similarity=0.154 Sum_probs=214.4 Q ss_pred CC--------------cccccccccceecchhcccchHHHHHHHHHhh--cCcEEeecC------CceecCcceeeeeee Q lcl|Aclame:pro 1 MA--------------DFSQTSFKGGVIAPRLQFNEYESAYHHSIEDA--VNFVVTEQG------SLITRCGSEEVGLCQ 58 (594) Q Consensus 1 m~--------------~~~~~~f~~Ge~sp~l~~r~d~~~y~~~~~~~--~N~~~~~~G------~~~~rpg~~~~~~~~ 58 (594) +. +..|.-|..--+-|.-.--. -+.-|.+++++ .|++- |-. |.+.-|--||+..+- T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 289 (911) T protein:vir:31 212 ITRATKDKSGSGTVYVNPVQYYFDKRGVYPSHSVLY-NSMKQESAKEIVALNVFS-PWADEKINFGTTTPPLGRYIHSAY 289 (911) T ss_pred eeeecccCCccceEEEchhheeecccCcCcchhhhh-hhhhhhccceeEEEeeec-cccccccccccCCCchhhhhhhhe Confidence 11 23455555444444311000 00111122221 11110 100 111111112222111 Q ss_pred CCCCCEEEEEEEeCCCceEEEEEeCCeEEEEeCCceEEecccccccccceeecccchhhhccceeEecCcEEEEecCCcc Q lcl|Aclame:pro 59 DGEVRLFRLPAVDAPSNDVIVEVGNTNIAVWVNDVRQVVANTPSEWRNTIDRIQTAYDTIGDDAGAANTGRLIMVHPALQ 138 (594) Q Consensus 59 ~~~~~~rlipF~~s~~q~y~le~g~~~~r~~~~~~~~~~~~~~~~~~~~~~~tpyta~~l~~i~~aq~adv~~~v~~~~~ 138 (594) - =+.+.+|-+|.+.+.--...++.. ..+ | ++.++.+--.-.+-++++.+ T Consensus 290 -----------~--~~~~~~~~~~~~~~~~~~~~~~~~-~~~-----------p-~~~e~~np~gl~~igt~~n~----- 338 (911) T protein:vir:31 290 -----------Y--FDSAAILSLGIGNLTPPTSDGTTE-GSG-----------P-AEEEISNPIGLDNIGTVNNL----- 338 (911) T ss_pred -----------e--eccceeeeecccccCCCCCCCccC-CCC-----------C-chhhhcCCCCcccccchhce----- Confidence 0 122334555555443322222111 111 1 11122111011111222111 Q ss_pred ceeEEeeccCceeecccccceeeeccccCCcceEEEEEeceEEEEe-CCCCCcEEEEEec--------cccccccccccC Q lcl|Aclame:pro 139 PKRLYRDNNNAWQFVNMHTGAVPAEWSPSNYPQTVGIFQNRVWYVG-SPVHRTYFWATRA--------GKLEDIAPSTAN 209 (594) Q Consensus 139 p~~L~R~~~~~w~~~~~~~~~~p~~~~~~g~Ps~v~f~~~RL~~~~-~~~~p~~v~~S~~--------gd~~nF~~~t~~ 209 (594) ++.-.+.-.| .....|+|++||.+|++|+. .+|...+|.+|+. .+|++-+++++. T Consensus 339 --k~~a~~~~~~--------------~~~~r~r~~~~yaGRVfyaD~dkngk~rIlFSqLv~sl~di~nCYQdaDPTSee 402 (911) T protein:vir:31 339 --KLIAEGTVRW--------------TVKDRPRCSGYHNGHVYFGDRDKNGKTRILVSQLVNSLDNIPKCFQDADPTAEE 402 (911) T ss_pred --eeeeccceee--------------eecccccceeeeccEEEEeeeccCcceeEEEEeeccccccccccccCCCccccc Confidence 1111122222 34457999999999999994 5555679999984 457777777642 Q ss_pred ----CCCccEEEEEcCCccEEEEEEcCCCEEEEecCcEEEEecCCCcccCcceeEEEeeeecccCCcc-cEEeCCeEEEE Q lcl|Aclame:pro 210 ----NPNDPISFVGIMEGTPCWIIASSDVLTIGTTINDYQLAASTGVSVTAATAILRRSSVQGTAAVQ-GIPAEEQVIFC 284 (594) Q Consensus 210 ----~d~d~i~~~~s~~~~~i~~~~~~~~L~l~t~~~q~~l~~~~~~~lTP~~~~~~~~s~~g~~~~~-Pv~~g~~v~F~ 284 (594) -|+|-..+...+..+++..+.++++|++|+.++.|.|.|.++...|.++..+.++|..||+.-. -|++|+.++|+ T Consensus 403 e~DLIdTDGg~vri~gah~Ii~LV~~G~sLlVFcaNGVWAI~G~d~~g~TATdy~ItKIsdvGcsspNSVVvVgn~i~fW 482 (911) T protein:vir:31 403 INDLIATDGFTMYPVGMGAPITMVEFNKRLLLLCTNGVWAIRGTSGGGATATDFTLDKVASVEFNSPQSVVDIGTAIVFW 482 (911) T ss_pred cchhhhcCCcEEecCCCCCceEEEEecCeEEEEEeCcEEEEeccCCCceeeeeeEEEEEeeeeeCCCCeEEEecCceEEe Confidence 3678888888888899999999999999999999999998877899999999999999997654 46799999999 Q ss_pred EcCCCEEEEEEeeecccceeecchhh-hhhhhhcccccccCCceEEEEEeCCCCeEEEEEc--CCCeEEEEEEec----- Q lcl|Aclame:pro 285 SRNKSKVYAMNYVREQDNWIPDEMSS-QAQHLFTPISSAKGASVRRVAYISDAAKSLWVVL--ENGQINYCCFDR----- 356 (594) Q Consensus 285 ~~~g~~v~e~~~~~~~d~~~~~dls~-~a~hl~~~~~~~~~~~i~~~a~~~~p~~~~~~~~--~dg~~~~~ty~~----- 356 (594) ++.| |..+.-.. -..+.++++|+ .++.+.+.++.....++ .-.|....+.+.|++- .|+...+. ++. T Consensus 483 Sd~G--IyaLganq-fnD~tAnNLTesTIQ~y~d~I~~dkIkNV-tgtyd~de~rVyW~yPn~lDe~teyk-t~~~~ILV 557 (911) T protein:vir:31 483 SERG--IIAIGVND-FGDLTSNNLTENTIDEYYDSLDRDIIKNV-KGTFINDENRVYWVVPNKQDSNGEYK-TDGELVLV 557 (911) T ss_pred eCCc--EEEEeecc-cCccccccccHHHHHHHHhhcChhhhceE-EEEEEccCCEEEEEecCccCCcccee-ecCceEEE Confidence 9988 77776554 34588999994 56777777764443333 3356677789999887 34443222 111 Q ss_pred -ccceEeEEEeecCCCeEEEEE---------------------EEccC---------------CCCEEEEEEEECCCCCc Q lcl|Aclame:pro 357 -TTDTKAWTQLELSGGKVIDIA---------------------AAFNP---------------DSDYAYVAVVRSKAING 399 (594) Q Consensus 357 -eq~v~aW~~w~~~~g~v~~v~---------------------~~~~~---------------~~d~~y~~v~r~~~~~g 399 (594) +-...+|.+|+.+.|..++.- .|-+. .+..+||+--|. +.+| T Consensus 558 fdLatgaFYPwtvs~gpLl~~p~y~Lv~TreEvtvPi~~etgaiIve~gsdPV~~tl~vdttGvDg~ayLl~frd-g~~g 636 (911) T protein:vir:31 558 LNLDTGGFYKHTVSGGPLLHAPFRRLVNTRAEVSIPITETDGTVITDTLGDPVTVTRTVTTTGVDGLAYFASFDD-GVNG 636 (911) T ss_pred EEeccCcccceeeecceeecccccccccccccceeeEEeecceEEEecCCCCeEEEEeeecccccceeEEEeecc-CCcc Confidence 122358999988776544110 00000 011222222221 1111 Q ss_pred ceeEEEEEeccCcccc-ccee--------eeeeEEccCcccccccCCcccCceeEEEEeCCeeccCeEecCCceEEEEec Q lcl|Aclame:pro 400 VQKNYTVLEKISSPRT-DWKR--------ADGWVVAQVNQNGDVLNLDRYIGRTAVIFSKYGLEAEVEVNNIGLTHRING 470 (594) Q Consensus 400 ~~~~~~~le~~~~~~~-~~~~--------~~~~~~~~~~~~~~~~~l~~l~g~tv~i~adg~~~~~~~v~~~~~tl~~~~ 470 (594) + +.++..+....+ ++.. ...|++.+-.+.+.+++.-.+.-.+... .....|..++-+.+ T Consensus 637 ~---~~f~a~~~~~~~~dw~~~~~~~~~~y~s~~~~~y~~~~~~~~~~~~pyi~sy~------~~~~rv~~~~y~~~--- 704 (911) T protein:vir:31 637 Q---FNFIAEHQPWGFADWANVPNMTRVNYSSYVDFAYEYPEVMIGNISLPYIHSYY------LTGIRVQTEQYTTE--- 704 (911) T ss_pred e---EEEEEeecCCeeeccccCccccccchhHHHHhhhhhhhhhhhcccCceeeeee------eeeeEEeccceeee--- Confidence 1 111111111000 0000 0001111111111111100000000000 01111111111100 Q ss_pred CCCCCeEEEeEeee----------eEEEecceeeeCCCCccceeeEEEEEEEEEEEcccceEE-ee--eecccccccccc Q lcl|Aclame:pro 471 YDPNTVYYVGYKMD----------SYFRTLTPSNGDMKKSMFGSKIRISKVQLALFDSIEPTV-NG--EPADDRSTDDIM 537 (594) Q Consensus 471 ~~~~~~v~VG~~y~----------~~v~~~~~~~~~~~g~~~~~~~ri~~v~v~l~~S~g~~v-~~--~~~~~~~~~~~~ 537 (594) ..|+.|. -.+++-+..+.-..|-...+ --.=.+.++-.+.+ |+ | .+.-.+=... T Consensus 705 -------~a~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~vVNGDAE-~GtmTGWtvt 771 (911) T protein:vir:31 705 -------TAHLSFHRVQAHQTTALGTVTFHKVDMMVSTGMQVIS-----FHKDDLLRTEAVTLVNPDAE-TGDATGWTVT 771 (911) T ss_pred -------cccceeEeeecccceeeeeeeeeeeeehhhccceeee-----eccccceeeeeeEEEcCCCC-CCCCCcceee Confidence 0011110 01111111111111111111 00001112222221 11 1 0000000000 Q ss_pred ccccccCCCccccccCcEEEEeecCCcCcceEEEEEECCCcCEEEEEEEEEEEeccC Q lcl|Aclame:pro 538 DARLLDFSSNSGSSNGTRLVDYNPLGWENDGKMVIAVEQPFLCEVVGVFSVVQSNKV 594 (594) Q Consensus 538 ~~~~~~~~~~~~~~tg~~~v~~~~~g~~~~~~v~I~~~~P~P~tIlai~~~v~~n~~ 594 (594) ...+ ......++..|..-+- + + .+++-.+.|+-- -+-.-.++.|++ T Consensus 772 aG~~-d~~Ta~p~~rGSyfFa--~-~--nn~n~aL~QDID-----SagaaaIDAG~v 817 (911) T protein:vir:31 772 AGTL-DVRTAAPLYQGSYYFW--S-D--SNANFAAYQDID-----PVGGGYITAGEL 817 (911) T ss_pred ccch-hhccCCchhcceEeEc--C-C--CCcchhhheecc-----ccccceeeeccc Confidence 0000 0011112333332221 1 1 123333334332 223344566666 No 29 >protein:vir:8837 Length: 513 # NCBI annotation: constituent protein # Family: family:all:4957 # MgeID: mge:158 # MgeName: PaP3 # Cross-refs: genbank:acc:NP_775245;genbank:gi:27476043;genbank:GeneID:2700591 Probab=99.42 E-value=2.3e-11 Score=78.92 Aligned_cols=484 Identities=10% Similarity=0.021 Sum_probs=232.8 Q ss_pred CCccccccc-ccceecchhcccchHHHHHHHHHhhcCcEEeecCCceecCcceeeeeeeCCCCCEEEEEEEeCCCceEEE Q lcl|Aclame:pro 1 MADFSQTSF-KGGVIAPRLQFNEYESAYHHSIEDAVNFVVTEQGSLITRCGSEEVGLCQDGEVRLFRLPAVDAPSNDVIV 79 (594) Q Consensus 1 m~~~~~~~f-~~Ge~sp~l~~r~d~~~y~~~~~~~~N~~~~~~G~~~~rpg~~~~~~~~~~~~~~rlipF~~s~~q~y~l 79 (594) ||-..++.. .-|.|.-.+ =.||.. +|-..+-|+++. +|.+.||||..=+.... +....-+.||.- .+..+.+ T Consensus 1 ~~~~~~~~~~~~g~~~d~~--p~~lp~--~a~s~~~N~~~~-~~~~~~~~g~~pv~a~~-~~~~~g~~~~~~-~g~~~~~ 73 (513) T protein:vir:88 1 MALERQEVKNPTGIVTDIA--PADLPL--DKWSFGNNVRFK-NGKAQKALGHSPIFDTA-QAPILDMFPFIR-NNIPYWL 73 (513) T ss_pred CCcCChhhcccccceeccC--hhhcCC--CcceeeeeeeEe-cceeeecCccceeeecC-CCCceeeeeeec-CCCeEEE Confidence 665433321 223332111 122322 455677787765 68899999999885553 334455678864 4556666 Q ss_pred EEeCCeEEEEeCCceEEecccccccccceeecccchhhhccceeEecCcEEEEecCCccceeEEeeccCceeecccccce Q lcl|Aclame:pro 80 EVGNTNIAVWVNDVRQVVANTPSEWRNTIDRIQTAYDTIGDDAGAANTGRLIMVHPALQPKRLYRDNNNAWQFVNMHTGA 159 (594) Q Consensus 80 e~g~~~~r~~~~~~~~~~~~~~~~~~~~~~~tpyta~~l~~i~~aq~adv~~~v~~~~~p~~L~R~~~~~w~~~~~~~~~ 159 (594) .-+.+.++.+...+ .. .. + ..||++..=....+++-++.++.++...+|+.+- .+.+.+.... T Consensus 74 ~~~~~~~~~~~~~t-~~-dv---s------~~~~~~~~~~~w~~~~f~~~i~a~ng~~~~q~~~---~~s~~f~dl~--- 136 (513) T protein:vir:88 74 LCSEKRLYLADGTT-II-DV---S------PGPYSASVTNRWSVGSFNGVIFANDGVNPPHHLP---PTESVFRVLP--- 136 (513) T ss_pred EeeceEEEEecCce-ee-ec---c------ccceeecccCceeeeeecCEEEEEcCCCcceEEc---CCCceeeecc--- Confidence 66666665554332 11 11 1 1355555545567888889999988888877742 2233333322 Q ss_pred eeeccccCCcc-----eEEEEEeceEEEEeC----CCCCcEEEEEecccc----ccccccccCCCCccEEEEEcCCccEE Q lcl|Aclame:pro 160 VPAEWSPSNYP-----QTVGIFQNRVWYVGS----PVHRTYFWATRAGKL----EDIAPSTANNPNDPISFVGIMEGTPC 226 (594) Q Consensus 160 ~p~~~~~~g~P-----s~v~f~~~RL~~~~~----~~~p~~v~~S~~gd~----~nF~~~t~~~d~d~i~~~~s~~~~~i 226 (594) |+| ..|.+|++||++++. .+.|+.|+.|..+|. ..+..+...++++=.++ .......+ T Consensus 137 --------g~p~~~~a~~i~v~~~flv~~~~t~~~~~~PnrV~wS~~~D~~~~P~~W~~t~~t~~a~~~~l-~d~~g~~v 207 (513) T protein:vir:88 137 --------NFPANTTFRRLKSFKNFLIGLNVTSNSIEMPQMVWWSTSADAGGVPASWDPTDPTKDAGQNTL-ADTNGAIV 207 (513) T ss_pred --------CCCcccceEEEEEEeeEEEEeecccCcCCCCceEEEecccCCcccccccccccccCccccccc-CCCcccee Confidence 233 357899999999764 346999999999996 33433322333333333 22333455 Q ss_pred EEEEcCCCEEEEecCcEEEEecCCCcccCcceeEEEeee-ecccCCcc-cEEeCCeEEEEEcCCCEEEEEEeeeccccee Q lcl|Aclame:pro 227 WIIASSDVLTIGTTINDYQLAASTGVSVTAATAILRRSS-VQGTAAVQ-GIPAEEQVIFCSRNKSKVYAMNYVREQDNWI 304 (594) Q Consensus 227 ~~~~~~~~L~l~t~~~q~~l~~~~~~~lTP~~~~~~~~s-~~g~~~~~-Pv~~g~~v~F~~~~g~~v~e~~~~~~~d~~~ 304 (594) ..++....|+||++++-|.++-.++ |....+++.+ ..||...+ =+.+|+.++|+++.| ++.+ +..+-... T Consensus 208 ~g~~~g~~liif~e~~i~~m~y~g~----~~if~~~~i~~~~G~~~p~SI~~~~~~~ffls~~G--f~~~--~G~~~~~I 279 (513) T protein:vir:88 208 DGVKLRDSFIIYKEDSVYSMRYIGG----LYIFQFQQLFNDVGILGPNCAIEFDGNHFVVGHGD--VYVH--NGVQKQSV 279 (513) T ss_pred eeeecccceEEEecccEEEEEecCC----CceEEEEeecccccccCCceeEEECCeEEEEeCCc--eEEe--cCceeeec Confidence 5677789999999999999974332 3466776665 57885544 366999999999987 6533 22211111 Q ss_pred ecchhhhhhh-hhcccccccCCceEEEEEeCCCCeEEEEEcCCCe------EEEEEEecccceEeEEEeecCCCeEEEEE Q lcl|Aclame:pro 305 PDEMSSQAQH-LFTPISSAKGASVRRVAYISDAAKSLWVVLENGQ------INYCCFDRTTDTKAWTQLELSGGKVIDIA 377 (594) Q Consensus 305 ~~dls~~a~h-l~~~~~~~~~~~i~~~a~~~~p~~~~~~~~~dg~------~~~~ty~~eq~v~aW~~w~~~~g~v~~v~ 377 (594) +. ...+. ++..+.. ........++-..-..+.|+...-+. ...+.|+-..+ .|+.-+++ .....+. T Consensus 280 g~---ekVdk~f~~~~n~-~~~~~~~~~~d~~~~~v~~~y~s~~~~~~~~~~~~lVYd~~~~--~Ws~~~~p-~~~~g~~ 352 (513) T protein:vir:88 280 ID---AQVRKFFFSDINP-DNYQRTFVLADHVNTEMWVCYSSTRSEPGKHCDRAIIWNWKEN--TWSIRDLP-NVLSGAY 352 (513) T ss_pred cc---chhhhhhhccCCc-ccceEEEEEEcCcccEEEEEecCCCCCCCcccceEEEEEccCC--eEEEEecc-chhhccc Confidence 11 11222 2222111 01111122222222233444332111 11233433332 45544432 1111110 Q ss_pred EEccCCCCEEEEEEEECCCCCcceeEEEEEeccCcccccceeeeeeEEccCcccccccCCcccCc-eeEE---EEeCCee Q lcl|Aclame:pro 378 AAFNPDSDYAYVAVVRSKAINGVQKNYTVLEKISSPRTDWKRADGWVVAQVNQNGDVLNLDRYIG-RTAV---IFSKYGL 453 (594) Q Consensus 378 ~~~~~~~d~~y~~v~r~~~~~g~~~~~~~le~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~g-~tv~---i~adg~~ 453 (594) ..+ +.+......... + .++....... . +.+.+ +... ..++|.+ T Consensus 353 g~~----~~~~~~~~~~~~--~---------~~d~~~~~~~-----------~-------~~~~~~~~sl~~~~~~~~~~ 399 (513) T protein:vir:88 353 GII----DPKTSNLWDDDS--N---------PWDTDTSVWG-----------E-------GSYNPAKSSMIFTSFQDAKL 399 (513) T ss_pred ccc----cccccceecccc--c---------ccccchhhhh-----------c-------cccccccceeEeeeccCCce Confidence 000 000000000000 0 0000000000 0 00000 0100 1111211 Q ss_pred ccCeEecCCceEEEEecCCCCCeEEEeEeeeeEEEecceeeeCCCCccceeeEEEEEEEEEEEcccceEEeeeecccccc Q lcl|Aclame:pro 454 EAEVEVNNIGLTHRINGYDPNTVYYVGYKMDSYFRTLTPSNGDMKKSMFGSKIRISKVQLALFDSIEPTVNGEPADDRST 533 (594) Q Consensus 454 ~~~~~v~~~~~tl~~~~~~~~~~v~VG~~y~~~v~~~~~~~~~~~g~~~~~~~ri~~v~v~l~~S~g~~v~~~~~~~~~~ 533 (594) . ....+ .-.-|-++++.++...+...+. ...++|.++..++..++.+.+..+.. ... T Consensus 400 ~---~fd~~-------------~~f~G~~lea~~~t~~~~~~~~-----~~~~~i~~v~~~~t~~g~~t~~vg~~--~~~ 456 (513) T protein:vir:88 400 F---LFGET-------------STFSGQSFTSTLERSDIYLGDD-----RMMKTVSAVIPHITGNGVCNIWVGNA--QVQ 456 (513) T ss_pred e---eeccc-------------ccccCCceEEEEEecCccccCc-----hhheeeeeeeeeeecceEEEEEEeee--ccC Confidence 1 00000 1145788888888877765422 22345666666665554443332211 111 Q ss_pred ccccccccccCCCccccccCcEEEEeecCCcCcceEEEEEECCCcCEEEEEEEEEEEeccC Q lcl|Aclame:pro 534 DDIMDARLLDFSSNSGSSNGTRLVDYNPLGWENDGKMVIAVEQPFLCEVVGVFSVVQSNKV 594 (594) Q Consensus 534 ~~~~~~~~~~~~~~~~~~tg~~~v~~~~~g~~~~~~v~I~~~~P~P~tIlai~~~v~~n~~ 594 (594) .. .+...........++..+++... .+-.+++|+...--|+++.++..|+...+= T Consensus 457 ~~----~~~~s~~~~~~~~~~~~~~~r~~--gRy~~~ri~i~~~~~w~~~G~~ve~~~~~g 511 (513) T protein:vir:88 457 GS----GIRWKGPYPYRIGQDYKIDTKHV--GRYIALKFDFASAGDWYFNGYTLEMAPKAG 511 (513) T ss_pred cc----ccccccceeeecccCceEEeccC--CceEEEEEEccCCCceEEeeEEEEEecCCC Confidence 10 00000000011122334444333 355666677767788899999999998633 No 30 >protein:vir:95475 Length: 771 # NCBI annotation: hypothetical protein ORF038 # Family: family:all:5234 # MgeID: mge:1570 # MgeName: PA11 # Cross-refs: genbank:acc:YP_001294631;genbank:gi:149408197;genbank:GeneID:5237042 Probab=99.41 E-value=2.8e-11 Score=78.48 Aligned_cols=547 Identities=15% Similarity=0.113 Sum_probs=258.1 Q ss_pred CCcc-c---cccccccee---cchhcccchHHHHHHHHHhhcCcEEeecCCceecCcceee-------eeeeCCCCCEEE Q lcl|Aclame:pro 1 MADF-S---QTSFKGGVI---APRLQFNEYESAYHHSIEDAVNFVVTEQGSLITRCGSEEV-------GLCQDGEVRLFR 66 (594) Q Consensus 1 m~~~-~---~~~f~~Ge~---sp~l~~r~d~~~y~~~~~~~~N~~~~~~G~~~~rpg~~~~-------~~~~~~~~~~rl 66 (594) |++- . -+.|-+|=| ||.-++ |++.-.-+||.+...|--.||-|+-+= ..+.-+ ..+++ T Consensus 1 m~~~~~~~~vNtFv~GliTEas~ltfp-------qnasiDe~N~~l~rdG~r~RR~g~~~E~~~~~vls~~~vp-a~g~~ 72 (771) T protein:vir:95 1 MAKTTNAAEFNTFVGGLITEASPLTFP-------QNASIDEVNFILNRDGSRNRRNGMDFENGATKVVCNTLVP-ADGTI 72 (771) T ss_pred CCcccchhHHhhhhhheeeccccccCC-------ccceeeeeeeeecCCCcchhhceeeeecCCceEEEEEEec-ccceE Confidence 9873 3 466777744 555444 456667799999999999999997652 221111 11222 Q ss_pred ------------------EEEEe---------CC----CceEEEE----EeCCe-EEEEeCCceEEeccccccccc---- Q lcl|Aclame:pro 67 ------------------LPAVD---------AP----SNDVIVE----VGNTN-IAVWVNDVRQVVANTPSEWRN---- 106 (594) Q Consensus 67 ------------------ipF~~---------s~----~q~y~le----~g~~~-~r~~~~~~~~~~~~~~~~~~~---- 106 (594) +=|+. .+ +..|.+- +.+.. +.+..-+|++..+....+.-. T Consensus 73 ~v~~~~W~na~G~v~~~~livqvg~~l~f~q~t~~pLs~~n~~~~a~~nlSPsh~isv~v~~G~livanp~i~~~~~~~d 152 (771) T protein:vir:95 73 AVTSHNWENAGGEVGRWISLVQVGTELKFFQTTGETLSEGNFYNYQFVNMSPSHKLSYAVVDGLLVVANGSRDIYVFEYD 152 (771) T ss_pred EeeeechhhcccccCcEEEEEEeccEEEEEecCCCcccccceeeeecceeccceeEEEEEeeeEEEEecCCccEEEEEec Confidence 11222 11 1112111 12211 333232333333322221100 Q ss_pred ------c---------eeecccchh-h---------------------hccceeEecCcE------------EEEecCCc Q lcl|Aclame:pro 107 ------T---------IDRIQTAYD-T---------------------IGDDAGAANTGR------------LIMVHPAL 137 (594) Q Consensus 107 ------~---------~~~tpyta~-~---------------------l~~i~~aq~adv------------~~~v~~~~ 137 (594) + ..++||+.. + +-+.-|+.-.++ +|....+. T Consensus 153 ~~t~s~t~~~ll~r~rf~~q~~~~G~d~~~~~~~~~~gt~~tn~~iynlyN~gw~~pk~~~~snt~~~~iV~~y~a~~g~ 232 (771) T protein:vir:95 153 SGSVSVTTKRLLVRDLFGVQDIVNGVDLRQGNDIATRPTVQTNAHIYNLRNQTFGVPRVTWHSNEPSDPIVTFRSAASGK 232 (771) T ss_pred CCcceeEeeeeeeeehhhccccccccceecccccccCCcccCchhheeccccceeccccccccCCccccceEeeeccCCC Confidence 0 001222111 1 111112211111 12222222 Q ss_pred cce--eEEe-----ecc---------Cceeecccccceeee---------c-----------cccCCcce---------- Q lcl|Aclame:pro 138 QPK--RLYR-----DNN---------NAWQFVNMHTGAVPA---------E-----------WSPSNYPQ---------- 171 (594) Q Consensus 138 ~p~--~L~R-----~~~---------~~w~~~~~~~~~~p~---------~-----------~~~~g~Ps---------- 171 (594) -|. .++. .+. ..|......+....+ + -..+.||+ T Consensus 233 ~pS~sd~~N~a~~k~~~~Ei~t~~~f~~~~~~~~~~Gt~~~~~G~yi~da~~~g~~~Lt~~ve~~gr~~s~~~~~~~l~~ 312 (771) T protein:vir:95 233 FPSNSDSVNLALSKRADVEPSTTDRFRAEDIVLNPIGTYETARGFFIIDAMARGKSRLEEIVKLKQRYPSLSFGVSSLPQ 312 (771) T ss_pred CcCCceeeccccchhhccceeeecccchhhhhhcccCcccccCcceeeehhhhcccccceeeeccccchhhhcccccccc Confidence 121 0111 000 011111111100000 0 00122444 Q ss_pred --------EEEEEeceEEEEe--------CCCC---CcEEEEEec--------ccccccccccc----CCCCccEEEEEc Q lcl|Aclame:pro 172 --------TVGIFQNRVWYVG--------SPVH---RTYFWATRA--------GKLEDIAPSTA----NNPNDPISFVGI 220 (594) Q Consensus 172 --------~v~f~~~RL~~~~--------~~~~---p~~v~~S~~--------gd~~nF~~~t~----~~d~d~i~~~~s 220 (594) .|+-|..|.|+++ .+|. ..+|.+||. ..|.+=+|+++ +-|+|.-.+..- T Consensus 313 ~~t~~~~~~vaeyagRvwYag~~~~~iD~dkng~~~~~~ilfSqLv~s~~di~nCyQd~DPTsee~~dLidTDGg~iri~ 392 (771) T protein:vir:95 313 DETPGGASVVCEYAGRVWYAGFSGQIIDGDDQSPRLVSYILFSQLVDSPADIVNCYQDGDPTSTEEPELVDTDGGFIRIE 392 (771) T ss_pred ccCCCCceeEEeeeeeEEEecceeEEeeccccCCceeeeEeeehhhcchhhcccccccCCCchhhhhhhhhcCCCEEEec Confidence 4789999999988 2333 235999974 45777777764 348888888888 Q ss_pred CCccEEEEEEcCCCEEEEecCcEEEEecCCCcccCcceeEEEeeeecccCCcc-cEEeCCeEEEEEcCCCEEEEEEeeec Q lcl|Aclame:pro 221 MEGTPCWIIASSDVLTIGTTINDYQLAASTGVSVTAATAILRRSSVQGTAAVQ-GIPAEEQVIFCSRNKSKVYAMNYVRE 299 (594) Q Consensus 221 ~~~~~i~~~~~~~~L~l~t~~~q~~l~~~~~~~lTP~~~~~~~~s~~g~~~~~-Pv~~g~~v~F~~~~g~~v~e~~~~~~ 299 (594) +.-++|.++.+++.|+||+.++.|+|.+.++...|.++..+.+++..||+.-+ =|++|+.++|+++.| |+.+.-+. T Consensus 393 gah~ii~Lv~f~~sLlvfc~NGVWAi~ggsd~g~tAtdY~ltKIs~vg~sspnSvVvvg~~i~ywsdtg--Iyal~~Nd- 469 (771) T protein:vir:95 393 GAHDIINLVNVGSAVMVVAANGIWMIQGGSDYGFTATNYLVTKISEHGCSSPNSVVVVDNSFMYWGDDG--IYHLTRNQ- 469 (771) T ss_pred CCCCceeEEEecceEEEEEecceEEEEeccCCceeeeeeEEEEeeeeccCCCccEEEecceEEEeeCCc--eEEEeecc- Confidence 88899999999999999999999999888888899999999999999987654 467999999999888 87776554 Q ss_pred ccceeecchh-hhhhhhhcccccccCCceEEEEEeCCCCeEEEEEcC--CCeEEEEE-EecccceEeEEEe---ecCCCe Q lcl|Aclame:pro 300 QDNWIPDEMS-SQAQHLFTPISSAKGASVRRVAYISDAAKSLWVVLE--NGQINYCC-FDRTTDTKAWTQL---ELSGGK 372 (594) Q Consensus 300 ~d~~~~~dls-~~a~hl~~~~~~~~~~~i~~~a~~~~p~~~~~~~~~--dg~~~~~t-y~~eq~v~aW~~w---~~~~g~ 372 (594) -..+++++|| ..++.+...++......++ -.|.....++.|++-+ |++--..| ..-+-...|+.+| ++.+|. T Consensus 470 fn~~tAqnLTekTIq~~~~~I~~dk~knVt-g~fd~~e~rvyw~yPn~~D~~~e~~t~LV~dLalgaFYp~~i~~~~ag~ 548 (771) T protein:vir:95 470 YGDYVANNLTEKTIQKYYEKIPSDAILNAT-GFYDSYDKKVKWLYNTVLDGRTEPVTELVFDLALGAFYPSKIGSLTAGR 548 (771) T ss_pred cCcchhhccchHHHHHHHhhcchhhhcceE-EEEEccCCEEEEEecceecCCCcceeeeeeeecccccccccccccccCc Confidence 3458999999 5778888777755444433 3577888899998853 33221111 1111223588888 333332 Q ss_pred E-EEEEE----------------Ecc-----CCCCEEEEEEEECCCCCcceeEEEEEeccCcccc---cceeeeeeEEcc Q lcl|Aclame:pro 373 V-IDIAA----------------AFN-----PDSDYAYVAVVRSKAINGVQKNYTVLEKISSPRT---DWKRADGWVVAQ 427 (594) Q Consensus 373 v-~~v~~----------------~~~-----~~~d~~y~~v~r~~~~~g~~~~~~~le~~~~~~~---~~~~~~~~~~~~ 427 (594) . .-+.+ ++. .+++..-....|.-.+++.. |..+++...+-. -..+.+.|++ T Consensus 549 l~~~vg~~~~p~~~lv~T~~eV~v~~~~v~~tG~~vtV~~~~r~~~~~~~~--y~~~~~dg~~g~~~Fa~~~~~~f~D-- 624 (771) T protein:vir:95 549 LPIPVGSVKIPPYKLVETGEEVTVASEQVTATGELVTVKVSTRSPVIRETK--YIIVEKLSSPMRISFGGYTDEEFVD-- 624 (771) T ss_pred cceeeeeeecCccccccccceEEecceeeEecCCceEEEEEEeeccccceE--EEEEEecCCCeeEEeccccCcceee-- Confidence 1 00000 000 01111111111221111111 112222221100 0000011111 Q ss_pred CcccccccCCcccCceeEEEEeCCeeccCeEecCCceEEEEecCCCCCeEEEeE---eee-eEEEec-ceeeeCCCCccc Q lcl|Aclame:pro 428 VNQNGDVLNLDRYIGRTAVIFSKYGLEAEVEVNNIGLTHRINGYDPNTVYYVGY---KMD-SYFRTL-TPSNGDMKKSMF 502 (594) Q Consensus 428 ~~~~~~~~~l~~l~g~tv~i~adg~~~~~~~v~~~~~tl~~~~~~~~~~v~VG~---~y~-~~v~~~-~~~~~~~~g~~~ 502 (594) +....|.+|..- ......+ ...-.++|. ||- +.+.-+ .=++.+..|.-. T Consensus 625 ---------W~sv~~~~vdy~--sy~~~gY---------------~~~gd~~~~k~~PYit~y~~~tedg~v~~~~g~~~ 678 (771) T protein:vir:95 625 ---------WKSVDGIGVDAP--AYLLTGY---------------LAGGDYQREKFVPYITFHFKKTEDGFVEDAEGDWT 678 (771) T ss_pred ---------cccCCCcccchH--HHHHhhh---------------hccchheeeeccceEEEEEEeecccceeccccccc Confidence 000111110000 0000000 000011111 221 111111 011222223111 Q ss_pred eeeEEEE--EEEEEEEcccc-eEEeeeeccccccccccccccccCCCccccccCcEEE--EeecCCcCcceEEEEEECCC Q lcl|Aclame:pro 503 GSKIRIS--KVQLALFDSIE-PTVNGEPADDRSTDDIMDARLLDFSSNSGSSNGTRLV--DYNPLGWENDGKMVIAVEQP 577 (594) Q Consensus 503 ~~~~ri~--~v~v~l~~S~g-~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~tg~~~v--~~~~~g~~~~~~v~I~~~~P 577 (594) -...-.. .+..+..+|.. .+++.+ ..-+.++....+..++.....++..| .....|..+-.+++|++... T Consensus 679 p~n~sSclm~~sw~ws~s~~t~k~~~~-----~eaYk~~~~~~p~~~~~~~yp~~~VV~TKsriRG~Gr~~~~rf~s~~g 753 (771) T protein:vir:95 679 PTNQSSCMVQSQWSWTNSPASNKWGRT-----WQAYRFRRHFFPDNIDNQFDDGNSVVETKSRLRGSGKVLSLYITTEPK 753 (771) T ss_pred ccCCcceEEEEEeeeecCCCCCccccc-----hheeeecceeccCCcchhcCCccceeeeeheeeecceEEEEEEEecCC Confidence 1111111 22222233211 122211 01111222333333333344444333 22234667888999999999 Q ss_pred cCEEEEEEEEEEEeccC Q lcl|Aclame:pro 578 FLCEVVGVFSVVQSNKV 594 (594) Q Consensus 578 ~P~tIlai~~~v~~n~~ 594 (594) --++|++-.+-|++|-- T Consensus 754 Kdlhl~Gysil~~~~~~ 770 (771) T protein:vir:95 754 KNLHIYGWSMLVDVNGT 770 (771) T ss_pred cceEEEeEEEEEeecCc Confidence 99999999999999987 No 31 >protein:vir:80177 Length: 1027 # NCBI annotation: tail tubular protein B # Family: family:all:12083 # MgeID: mge:1878 # MgeName: Pf-WMP3 # Cross-refs: genbank:acc:YP_001285795;genbank:gi:148747829;genbank:GeneID:5220453 Probab=99.36 E-value=1.7e-12 Score=85.06 Aligned_cols=560 Identities=16% Similarity=0.151 Sum_probs=258.9 Q ss_pred CCcccccccccceecchh---cccchHHHHHHHHHhhcCcEEe--ecCCceecCccee----eeeeeCCCCCEEEEEEEe Q lcl|Aclame:pro 1 MADFSQTSFKGGVIAPRL---QFNEYESAYHHSIEDAVNFVVT--EQGSLITRCGSEE----VGLCQDGEVRLFRLPAVD 71 (594) Q Consensus 1 m~~~~~~~f~~Ge~sp~l---~~r~d~~~y~~~~~~~~N~~~~--~~G~~~~rpg~~~----~~~~~~~~~~~rlipF~~ 71 (594) -+|+-.+-..+---+|.- +|=.|=.+|.-++..-.|.-|. -.||. |.||.- |..+ +.|-+-|.. T Consensus 278 ta~F~~~~~~~~T~~P~~AD~YG~~~G~~~~~~~~A~L~~sPFF~TFG~~--~t~TP~P~~~V~lL-----R~RELRFN~ 350 (1027) T protein:vir:80 278 TATFNDTYTFSNTGQPANADSYGWGDGSVYNVGASAYLNTSPFFATFGDT--RTPTPQPPETVHLL-----RQRELRFNY 350 (1027) T ss_pred eeeecCceeecCCCCCCCcccccccCCceEeecccceeeccceEEEeccc--cCCCCCchhheeee-----eeeeeeecc Confidence 122211111122223321 3444444443343333333221 23443 222221 1111 123333433 Q ss_pred CCCceEEEEEeCCeEEEEeCCceEEecccccccccceee-cccchhhhccceeEecCc--EEEEecCCccceeEEeeccC Q lcl|Aclame:pro 72 APSNDVIVEVGNTNIAVWVNDVRQVVANTPSEWRNTIDR-IQTAYDTIGDDAGAANTG--RLIMVHPALQPKRLYRDNNN 148 (594) Q Consensus 72 s~~q~y~le~g~~~~r~~~~~~~~~~~~~~~~~~~~~~~-tpyta~~l~~i~~aq~ad--v~~~v~~~~~p~~L~R~~~~ 148 (594) .++- .+..+|++.+++.....-.. ..+.+.+. +-|.+. -.-+.+|. .+|++-.+..|.-|...+.. T Consensus 351 G~GA------~~~~L~V~~D~~~~s~N~ss-T~~~T~R~~~L~~A~----G~~~~~A~dlayY~A~~GATPL~IS~~aA~ 419 (1027) T protein:vir:80 351 GNGA------TGANLRVTVDGTALSANYSS-TVAGTNRAYALYKAD----GTLCTSASDLAYYIAFTGATPLGISPTAAV 419 (1027) T ss_pred CCCC------CCcceEEEEcceeeeeeeee-eeeecceeEEEeeec----cccccccccceeeeeeecccccccccccee Confidence 3321 23467777777665543211 11111111 111111 01111221 22443333334333222221 Q ss_pred c---------eeeccccc-----------c--eeeeccccCCcceEEEEEeceEEEEeCCCCCcEEEEEeccc------c Q lcl|Aclame:pro 149 A---------WQFVNMHT-----------G--AVPAEWSPSNYPQTVGIFQNRVWYVGSPVHRTYFWATRAGK------L 200 (594) Q Consensus 149 ~---------w~~~~~~~-----------~--~~p~~~~~~g~Ps~v~f~~~RL~~~~~~~~p~~v~~S~~gd------~ 200 (594) . |...-.+. . +...-.+.+.+|+..+.||.||++.+..+.|..+.+|.+|| + T Consensus 420 t~~~~~R~yi~~~~~~T~~~~~~G~Y~k~YGlG~~~~Y~~~~F~~I~TvY~~RLvL~~~t~~~~~~~~S~~GD~~~~G~~ 499 (1027) T protein:vir:80 420 TITNVDRTYIGSAATQTDNAYVQGGYFKVYGLGLWANYGTGQFPRIATVYQSRLVLGGFTNDPTRVVFSATGDTVEGGVK 499 (1027) T ss_pred eeecCceeeeeeeccccCCceEeeeEEEEEEeeeeeecCCccccceeeeeeeeeEEeccCCCcceEEEeecCCcccCcee Confidence 1 11100000 0 11112245668999999999999999999999999999876 8 Q ss_pred cccccccc-CC--CCccEEEEE-c-CCccEEE-EEEcCCCEEEEecCcEEEEecCCCcccCcceeEEEeeeeccc-CCcc Q lcl|Aclame:pro 201 EDIAPSTA-NN--PNDPISFVG-I-MEGTPCW-IIASSDVLTIGTTINDYQLAASTGVSVTAATAILRRSSVQGT-AAVQ 273 (594) Q Consensus 201 ~nF~~~t~-~~--d~d~i~~~~-s-~~~~~i~-~~~~~~~L~l~t~~~q~~l~~~~~~~lTP~~~~~~~~s~~g~-~~~~ 273 (594) +||+.-+. ++ |+||.++.. | +...-|. .+..++.|++||..+-|.+.|+ +..++|..-.++.+|.+|. +.-- T Consensus 500 Y~F~QvTD~L~G~~sDPF~L~VsSsq~~d~vT~~~~WQ~~LFV~T~~~T~~~~GG-d~t~~~a~~~VN~iSs~G~~N~~~ 578 (1027) T protein:vir:80 500 YNFFQVTDDLDGLDSDPFDLVVSSSQADDYVTGLVEWQSSLFVLTRRATFRANGG-DATISPARRFVNYISSLGLVNPFS 578 (1027) T ss_pred eeeeeeehhhccCcCCceeEEEecccccceeeeeeeeceeEEEEecceeEEeecC-ccccchhHHHHHHHHhhcccCcce Confidence 99998764 33 899999743 3 3444454 4567999999999999999875 4569999999999999996 5555 Q ss_pred cEEeCCeEEEEEcCCCEEEEEEeeecccceeecchhhhhhhhhcccccccCCceEEEEEeCCCCeEEEEEcCCC-e--EE Q lcl|Aclame:pro 274 GIPAEEQVIFCSRNKSKVYAMNYVREQDNWIPDEMSSQAQHLFTPISSAKGASVRRVAYISDAAKSLWVVLENG-Q--IN 350 (594) Q Consensus 274 Pv~~g~~v~F~~~~g~~v~e~~~~~~~d~~~~~dls~~a~hl~~~~~~~~~~~i~~~a~~~~p~~~~~~~~~dg-~--~~ 350 (594) -|+....|+|.++.| +..+...-+.|+|.+.+-|+.+..+|....+....+..+|.|.++.+. +++.+..| + .. T Consensus 579 VV~T~~~V~Yl~~~G--~F~L~~r~~~~~Y~A~EkSiKIR~~F~~~~~ta~~~~~Wm~~~q~~~~-LYv~L~~~~eT~~~ 655 (1027) T protein:vir:80 579 VVRTDTAVFYLSDSG--VFNLTPRVEDGEYQAIEKSIKIRKVFGKTTSTAVSSAAWMSFDQNRKV-LYVALPRGSETTVA 655 (1027) T ss_pred EEEeeeEEEEeeccc--eeeccCCccCCcchhhhhhhhhhhhhhhhccccccceeeeeeccCCce-EEEEecCCCcchhh Confidence 678899999999888 999999999999999999999999999988888888888988888554 44444322 2 22 Q ss_pred EEEEecccceEeEEEeecCCCeEE-----------------------EEEEEcc--------------CCC------CEE Q lcl|Aclame:pro 351 YCCFDRTTDTKAWTQLELSGGKVI-----------------------DIAAAFN--------------PDS------DYA 387 (594) Q Consensus 351 ~~ty~~eq~v~aW~~w~~~~g~v~-----------------------~v~~~~~--------------~~~------d~~ 387 (594) .-.|+-.---.+|+..+..+|... -||.+.- .++ .-+ T Consensus 656 S~~~~~N~~~DSWt~~~t~~~Fk~YtghP~V~~~~~~s~L~~v~~~~TV~ML~~~~~~YvDFF~~CG~~~~~Vlt~~~GI 735 (1027) T protein:vir:80 656 SALYVYNTFRDSWTQYDTLGGFKTYTGHPYVDTVLGDSFLLMVAYGGTVCMLKLYGSRYVDFFNKCGSFTGNVLTANSGI 735 (1027) T ss_pred hhhhhhhhhhcchhhhhcccCcccccCCchhhhhhhhhhhhhhcCchhhhhhhhhcchhhhhhhhcccceeeEEecCCce Confidence 111111111125555544333200 0111100 000 001 Q ss_pred EEEE--------EECCCCCcce----eEEE-----------EEeccCcccccceeeeeeEEccCcccccccCC-cccCce Q lcl|Aclame:pro 388 YVAV--------VRSKAINGVQ----KNYT-----------VLEKISSPRTDWKRADGWVVAQVNQNGDVLNL-DRYIGR 443 (594) Q Consensus 388 y~~v--------~r~~~~~g~~----~~~~-----------~le~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~l~g~ 443 (594) |-+. .-...+.+.+ ++|. -+|.+.- .....++ .+-...+.+..++--| +.-.|+ T Consensus 736 Y~~~~P~wnsP~I~~~svs~tt~~~~q~Ye~~T~~~vvpydnvedlsi-yvnGT~L-s~~~~~~~~~~~i~LL~~~~~~~ 813 (1027) T protein:vir:80 736 YTWTAPFWNSPVISNISVSGTTTLAVQRYELPTDLQVVPYDNVEDLSI-YVNGTRL-SFGTDWVKQGKAIYLLSDPGDGK 813 (1027) T ss_pred eEeecccccCCeeeEEEeeccchhhhheecccccccccccccccccee-eecceeE-eecCchhhcCCEEEEecCCCCcc Confidence 1110 0000111111 1110 0111100 0000000 0000000011111000 011233 Q ss_pred eEEEE------------------------eCCe--ecc-CeEecCCceEEEEecCCCCCeEEEeEeeeeEEEecceeeeC Q lcl|Aclame:pro 444 TAVIF------------------------SKYG--LEA-EVEVNNIGLTHRINGYDPNTVYYVGYKMDSYFRTLTPSNGD 496 (594) Q Consensus 444 tv~i~------------------------adg~--~~~-~~~v~~~~~tl~~~~~~~~~~v~VG~~y~~~v~~~~~~~~~ 496 (594) ++.++ -.|- .++ +++..+.+++.+-.+ .+..+.+|..|.+.++.+-+.+ T Consensus 814 ~~s~Vprcpvnvsy~~~~~~~~TT~~TV~~N~~~~iQ~Tdy~~~GS~L~~~~~L--tN~~~~~G~~Y~S~Y~SP~F~L-- 889 (1027) T protein:vir:80 814 TVSIVPRCPVNVSYQGDVTFDETTAQTVWVNNLLQIQGTDYTLSGSTLTFTDTL--TNAVVEVGNAYISYYQSPMFLL-- 889 (1027) T ss_pred eEEEEecccccccccccccccccccceEEecceeeeccceeeeccCcccccccc--ccceEEEeecchhhhcchhhhh-- Confidence 33332 1111 111 223333333322111 3567899999999888766644 Q ss_pred CCCccceeeEEEEEEEEEEEcccce-------EEeeeecccccccccccccccc-----CCCccccccCcEEEEeecCCc Q lcl|Aclame:pro 497 MKKSMFGSKIRISKVQLALFDSIEP-------TVNGEPADDRSTDDIMDARLLD-----FSSNSGSSNGTRLVDYNPLGW 564 (594) Q Consensus 497 ~~g~~~~~~~ri~~v~v~l~~S~g~-------~v~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~tg~~~v~~~~~g~ 564 (594) .+.++-||+.++.+.+.+---+ .+.++.+++-.+ .+..+... +.......+.-....+...-| T Consensus 890 ---~SL~~LKk~K~~~L~~Dnedvlpvytigdlasgqdvddlvg--kwktrananisvtydsentsetsydiysfsdlvw 964 (1027) T protein:vir:80 890 ---GSLSNLKKVKHVYLYFDNEDVLPVYTIGDLASGQDVDDLVG--KWKTRANANISVTYDSENTSETSYDIYSFSDLVW 964 (1027) T ss_pred ---hhhhhhhheeeeEEEEcCCcceeeeeeccccCCCchhHhhh--hhcccccceeEEEecCcCcccceeeeeehhhhhc Confidence 3567788899999888654211 111111110000 01111111 001111111100111111122 Q ss_pred CcceEEEE-----EECC--CcCEEEEEEEEEEEeccC Q lcl|Aclame:pro 565 ENDGKMVI-----AVEQ--PFLCEVVGVFSVVQSNKV 594 (594) Q Consensus 565 ~~~~~v~I-----~~~~--P~P~tIlai~~~v~~n~~ 594 (594) +. ..+.+ ++.. -+.-.+|++.+..++|-- T Consensus 965 dn-affdvdptnlqstryalfkeallgvgynyqigvw 1000 (1027) T protein:vir:80 965 DN-AFFDVDPTNLQSTRYALFKEALLGVGYNYQIGVW 1000 (1027) T ss_pred cc-ceecccccccchhhHHhhhhhHhhcccceeeeee Confidence 21 11111 1110 112235556555544432 No 32 >protein:vir:108312 Length: 458 # NCBI annotation: hypothetical protein # Family: family:all:1540 # MgeID: mge:2007 # MgeName: BA3 # Cross-refs: genbank:acc:YP_001552278;genbank:gi:160700603;genbank:GeneID:5758828 Probab=96.06 E-value=0.0011 Score=36.89 Aligned_cols=432 Identities=10% Similarity=0.061 Sum_probs=178.2 Q ss_pred CCcccccccccceecchhcccchHHHHHHHHHhhcCcEEee------cCCceecCcceeeeeeeCCCCCEEEEEEEeCCC Q lcl|Aclame:pro 1 MADFSQTSFKGGVIAPRLQFNEYESAYHHSIEDAVNFVVTE------QGSLITRCGSEEVGLCQDGEVRLFRLPAVDAPS 74 (594) Q Consensus 1 m~~~~~~~f~~Ge~sp~l~~r~d~~~y~~~~~~~~N~~~~~------~G~~~~rpg~~~~~~~~~~~~~~rlipF~~s~~ 74 (594) |+.+--+- |- -.+|.+ ...++.|-|+.+.+ .|.+.-=||++.-+.+.. ++.|-. ...+ T Consensus 1 m~~~~ip~---gs----y~a~~~----~~daq~~VN~yp~~~e~g~ss~~l~~tPGl~~f~~~~~--~~~~g~---~~~~ 64 (458) T protein:vir:10 1 MVQRQIPL---VA----TTAEGD----VSGQEILVNVYPRKSDGGKYPFTLRHTPGLAFFCELPT--FPVMAM---HQNG 64 (458) T ss_pred Cceeeece---ee----eecccc----cccceeeeeeeeecccccccccceEecCCceeeecCCC--CceeeE---EecC Confidence 77753221 10 112222 12388899999975 234444466655544332 111111 0000 Q ss_pred ceEEEEEeCCe-EEEEeCCceEEecccccccccceeecccchhhhccceeEecCcEEEEecCCccceeEEeeccCceeec Q lcl|Aclame:pro 75 NDVIVEVGNTN-IAVWVNDVRQVVANTPSEWRNTIDRIQTAYDTIGDDAGAANTGRLIMVHPALQPKRLYRDNNNAWQFV 153 (594) Q Consensus 75 q~y~le~g~~~-~r~~~~~~~~~~~~~~~~~~~~~~~tpyta~~l~~i~~aq~adv~~~v~~~~~p~~L~R~~~~~w~~~ 153 (594) -++....... .++-..++....++.+. ..-+..+.++..+.++... ..++.+..++.+. T Consensus 65 -g~ly~v~g~~LY~V~~~~~~~~iG~i~g---------------sg~VsMa~ng~q~vi~~G~----~gY~yd~at~~~~ 124 (458) T protein:vir:10 65 -SRAFAVTPRDMYEISKDGTYKRLGSVDF---------------KGRVVMEDNGKQIVMVDGE----KGYYYDSETEIVQ 124 (458) T ss_pred -CEEEEeeCceEEEEeCCceEEEEecccC---------------ceeEEEeeCCcEEEEEECC----eEEEEeecccEEE Confidence 0001111111 11212121111111100 0223344444445455443 2444433333333 Q ss_pred ccccceeeeccccCCcceEEEEEeceEEEEeCCCCCcEEEEEeccccccccccccCCCCccEEEE--EcCCccEEEEEEc Q lcl|Aclame:pro 154 NMHTGAVPAEWSPSNYPQTVGIFQNRVWYVGSPVHRTYFWATRAGKLEDIAPSTANNPNDPISFV--GIMEGTPCWIIAS 231 (594) Q Consensus 154 ~~~~~~~p~~~~~~g~Ps~v~f~~~RL~~~~~~~~p~~v~~S~~gd~~nF~~~t~~~d~d~i~~~--~s~~~~~i~~~~~ 231 (594) ..+..+ -+-+..|.|..+|++|.-... ..++.|...| ..-||++++ .++.+.++-.+.. T Consensus 125 ~i~d~~-------~~~~~~v~~~dGy~V~~~~g~--~~~~is~L~d----------~s~d~l~fa~Ae~~pD~iv~i~~~ 185 (458) T protein:vir:10 125 EIKAEG-------FYPASTVTYQDGYFIFDRKGT--GQFFISELLD----------VAFDPLDFATAEGQPDPLLAVLSD 185 (458) T ss_pred eccCcc-------ccCcceEEEeCcEEEEEeeCC--CEEEEEecCc----------ceeCcceeeeecCCCCceEEEEee Confidence 333211 123578999999998875443 2577775433 124577763 3566677788889 Q ss_pred CCCEEEEecCcE--EEEecCCCcccCcceeEEEeee--ecccCCc-ccEEeCCeEEEEEcCCCEEEEEEeeecccceeec Q lcl|Aclame:pro 232 SDVLTIGTTIND--YQLAASTGVSVTAATAILRRSS--VQGTAAV-QGIPAEEQVIFCSRNKSKVYAMNYVREQDNWIPD 306 (594) Q Consensus 232 ~~~L~l~t~~~q--~~l~~~~~~~lTP~~~~~~~~s--~~g~~~~-~Pv~~g~~v~F~~~~g~~v~e~~~~~~~d~~~~~ 306 (594) .+.|++|.+..- |..+|..+-++ ...+.. ..||+.- .=..+|++++|++..+ .|+.+ ++|+++ T Consensus 186 ~~~i~~fG~~TiEvw~ntG~a~fpy-----~r~~ga~i~~Gcaa~~sv~~~~~t~~~l~~d~-~Vy~l------~g~~~~ 253 (458) T protein:vir:10 186 HREVFMFGQETIEVWYNSGAADFPF-----ERNQGAFIEKGIGAPYSVAKTNNTVYFIGSDL-MIYQI------TGYTPV 253 (458) T ss_pred ccEEEEEeccceEEEEecCCCCcce-----eecccceeeecccCcchhhhhCceEEEEcCCe-EEEEe------cCceeE Confidence 999999988775 77877654332 111111 3576532 2245899999998765 23332 356666 Q ss_pred chhhh-hhhhhcccccccCCceEEEEEeCCCCeEEEEEcCCCeEEEE----------EEecccceEeEEEeec-CCCeEE Q lcl|Aclame:pro 307 EMSSQ-AQHLFTPISSAKGASVRRVAYISDAAKSLWVVLENGQINYC----------CFDRTTDTKAWTQLEL-SGGKVI 374 (594) Q Consensus 307 dls~~-a~hl~~~~~~~~~~~i~~~a~~~~p~~~~~~~~~dg~~~~~----------ty~~eq~v~aW~~w~~-~~g~v~ 374 (594) -||-+ ++..++. +.-. +.+.+.+..+|..+++ .|+-..+ .||.-+. ....-+ T Consensus 254 rIST~aIE~~i~s---y~~~-----------da~a~t~~~eGH~fy~LtfP~a~~Tw~yD~~t~--~Wher~Sg~~~~~R 317 (458) T protein:vir:10 254 RISTHAVEQTLKG---VNLS-----------DAFAYTYQSEGHLFYVLTIPGKNLTWCYDISSG--SWHVRQSYQFDRHV 317 (458) T ss_pred EeeCHHHHHHHhc---CChh-----------heEEEEEEecCeEEEEEECCCCCceeEEecccc--cceeeccCCCCceE Confidence 66542 2333321 1111 2334444444443332 2222222 3665322 001111 Q ss_pred EEEEEccCCCCEEEEEEEECCCCCcceeEEEEEeccCcccccceeeeeeEEccCcccccccCCcccCceeEEEEeCCeec Q lcl|Aclame:pro 375 DIAAAFNPDSDYAYVAVVRSKAINGVQKNYTVLEKISSPRTDWKRADGWVVAQVNQNGDVLNLDRYIGRTAVIFSKYGLE 454 (594) Q Consensus 375 ~v~~~~~~~~d~~y~~v~r~~~~~g~~~~~~~le~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~g~tv~i~adg~~~ 454 (594) ..+.+...+ -+++ = +.-||... .++.....+ .|+ .+ T Consensus 318 a~~~v~~~g---~~~v-G--D~~ng~ly------~ld~~~~td-----------------------~g~---------~i 353 (458) T protein:vir:10 318 SNNSIYFDQ---KTLV-G--DFQNGRIY------IMADNYYTD-----------------------DGD---------PV 353 (458) T ss_pred EEEEEEeCC---eEEE-E--EcCCCeEE------EEcccCcCC-----------------------CCc---------ee Confidence 111111100 0000 0 01111110 001000000 000 00 Q ss_pred cCeEecCCceEEEEecCCCCCeEEEeEeeeeEEEecceeeeCCCCccceeeEEEEEEEEEEEcccceEEeeeeccccccc Q lcl|Aclame:pro 455 AEVEVNNIGLTHRINGYDPNTVYYVGYKMDSYFRTLTPSNGDMKKSMFGSKIRISKVQLALFDSIEPTVNGEPADDRSTD 534 (594) Q Consensus 455 ~~~~v~~~~~tl~~~~~~~~~~v~VG~~y~~~v~~~~~~~~~~~g~~~~~~~ri~~v~v~l~~S~g~~v~~~~~~~~~~~ 534 (594) ....++ ..+..+ .. .+. +.-+.+++....|...++ -.=-.+.|++.++.|..++.+..-...+ T Consensus 354 ~~~~~~-----p~~~~~---~~---rl~----~~~~el~~~tGvg~~~~~-~~~p~~~l~~S~d~g~~~s~~~~~~~lg- 416 (458) T protein:vir:10 354 VREFIL-----PVVNNG---RE---FLT----VDSLELDLSSGVGLTVGQ-GSDPELRVYFSKDNGNEYSQNFKVGKIG- 416 (458) T ss_pred eeeeec-----cceeCC---CC---eEE----EEEEEEEEecceeeeeCC-CCCceEEEEEeeCCCcccchhHHHhhcC- Confidence 000000 000000 00 000 000111111111111110 0002344555566666554332110000 Q ss_pred cccccccccCCCccccccCcEEEEeecCCcCcceEEEEEECCCcCEEEEEEEEEEE Q lcl|Aclame:pro 535 DIMDARLLDFSSNSGSSNGTRLVDYNPLGWENDGKMVIAVEQPFLCEVVGVFSVVQ 590 (594) Q Consensus 535 ~~~~~~~~~~~~~~~~~tg~~~v~~~~~g~~~~~~v~I~~~~P~P~tIlai~~~v~ 590 (594) +.+.+ ..++.....|..++--++|+-.+|.|.+|++.-.++. T Consensus 417 -----~~gey---------~tr~~~~rlG~ar~rvf~v~~s~p~~~~l~ga~~~~r 458 (458) T protein:vir:10 417 -----RKGEF---------LTRAKVNRFGCARQFTFKVEISDPIPVDIGGAWVEVR 458 (458) T ss_pred -----Ccchh---------hhhhhhhhhccCcceEEEEEEecchhhcceeeeEEeC Confidence 01110 1222344556666666999999999999999999999 No 33 >protein:vir:1778 Length: 680 # NCBI annotation: tail protein A # Family: family:all:825 # MgeID: mge:38 # MgeName: P60 # Cross-refs: genbank:acc:NP_570344;genbank:gi:18640503;genbank:GeneID:932716 Probab=92.11 E-value=0.013 Score=30.96 Aligned_cols=534 Identities=9% Similarity=0.001 Sum_probs=160.2 Q ss_pred CCccc--ccccccceecchhcccchHHHHHHHHHhhcCcEEeecCCceecCcceeeeeeeCCCCCEEEEE-EEeCCCceE Q lcl|Aclame:pro 1 MADFS--QTSFKGGVIAPRLQFNEYESAYHHSIEDAVNFVVTEQGSLITRCGSEEVGLCQDGEVRLFRLP-AVDAPSNDV 77 (594) Q Consensus 1 m~~~~--~~~f~~Ge~sp~l~~r~d~~~y~~~~~~~~N~~~~~~G~~~~rpg~~~~~~~~~~~~~~rlip-F~~s~~q~y 77 (594) |+-+. -+||-+|. .--.|..|+..=|+.+.||++-|..|++||||+.||+.+........... +....++.| T Consensus 1 M~~v~~si~nl~~Gv-----SqQp~~~r~pgQ~~~q~N~~~d~v~Gl~kRpg~~~i~~l~~~~~~~~~~~~~rd~~e~~~ 75 (680) T protein:vir:17 1 MAAVEQMVPNLLGGI-----SQQPDPLKLPGQVKQARNVQLDPTFGALKRPGTELIMQVTGIPKRAKWIPIMRDAREHYY 75 (680) T ss_pred CccceecchhhhCcc-----eecchhhcCcchhhhhhccccCcCcccccCccceeeeeccCCCCCceeEEEecCCCCeEE Confidence 99884 56787774 23568888999999999999999999999999999998754333232222 444455666 Q ss_pred EEEEeCC-------eEEEEeCC-c-eEE-ecccccccccceeecccchhhhccceeEecCcEEEEecCCccceeEEeecc Q lcl|Aclame:pro 78 IVEVGNT-------NIAVWVND-V-RQV-VANTPSEWRNTIDRIQTAYDTIGDDAGAANTGRLIMVHPALQPKRLYRDNN 147 (594) Q Consensus 78 ~le~g~~-------~~r~~~~~-~-~~~-~~~~~~~~~~~~~~tpyta~~l~~i~~aq~adv~~~v~~~~~p~~L~R~~~ 147 (594) ++.-+.+ .+|+|... | ... ....+. .. ...+=++....+|++.-.+|.-|++++.+.+..-....+ T Consensus 76 ~~~~~~g~~~~~~~~i~v~d~~~G~~~~v~~~~~~-~~---~~~~~~~~~~~~lr~~tv~d~tfi~N~~v~~~~~~~~~~ 151 (680) T protein:vir:17 76 VAIYREGANESGDLRIRVFDLKAGVERAVSFVGGE-VE---EYFPGDETDWEAIRSLTIGDYTFLSNPNVQPTTWSRSFS 151 (680) T ss_pred EEEEcCCCcccccceeEEEEccCCeEEEEEcCCCc-eE---EEeecCCCCccceEEEEEcCEEEEECCeEEEeccCCCCC Confidence 5554444 39999753 2 221 111111 00 011223334457888889999999998865542210000 Q ss_pred C---ceeecccccceeee----------------c---cc-------cCCcceEEEEEeceEEEEeCCCCCcEEEEEecc Q lcl|Aclame:pro 148 N---AWQFVNMHTGAVPA----------------E---WS-------PSNYPQTVGIFQNRVWYVGSPVHRTYFWATRAG 198 (594) Q Consensus 148 ~---~w~~~~~~~~~~p~----------------~---~~-------~~g~Ps~v~f~~~RL~~~~~~~~p~~v~~S~~g 198 (594) . .+-.....-..+.. . .+ -+++..+....=.|-+.+.. +-..... T Consensus 152 ~~~~g~~~v~~~ayg~ty~v~ing~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Ag~~t~~~~~~a~------la~~l~~ 225 (680) T protein:vir:17 152 RRPEGLVTIGAAGYGTSYIVDFATEDSGQQRRWAVQEMQAPKTKRKKGDGSPDEAGETTVNNWNGTG------LSFRVKV 225 (680) T ss_pred CCCeeEEEEEEeeeeeEEEEEEeccccceeeeeeeeeeeccccccccccccCCCCcceeeeeeeeee------eeeeeee Confidence 0 00000000000000 0 00 00011100000001111100 0000000 Q ss_pred ccccccccccCCCCccEEEEEcCCccE----EEEEEcCCCEEEEecCcEEEEecCCC----------------------c Q lcl|Aclame:pro 199 KLEDIAPSTANNPNDPISFVGIMEGTP----CWIIASSDVLTIGTTINDYQLAASTG----------------------V 252 (594) Q Consensus 199 d~~nF~~~t~~~d~d~i~~~~s~~~~~----i~~~~~~~~L~l~t~~~q~~l~~~~~----------------------~ 252 (594) .--+|... .+.-.+...... ... .-+....+-+.+.-++.+|.|.-... . T Consensus 226 ~~~~~~~~---~g~~~~~~y~~~-~~l~~tg~~~~~~~~t~~v~~~G~~y~IsI~~~~~~~~~~~~~s~~~~t~~~~~a~ 301 (680) T protein:vir:17 226 EARAFLVD---DGEEYGHNYIPY-VTLLTPGNNTSPFPDTIRVDVSGEGWDIKVTKQIQSKVYANLGTAQFTTPVDQSGG 301 (680) T ss_pred ccceeeec---CCCceEEEEeeE-EEEecCCccccccCceEEEecccceeEEEEccceeeEeccCccceeeeeccCCccc Confidence 00000000 000000000000 000 00000001111111222222211100 0 Q ss_pred ccCcceeEEEeeeeccc-CCcccEEeCCeEEEEEcC--CCEEEEEEeeecccceeecchh------hhhhhhhccccccc Q lcl|Aclame:pro 253 SVTAATAILRRSSVQGT-AAVQGIPAEEQVIFCSRN--KSKVYAMNYVREQDNWIPDEMS------SQAQHLFTPISSAK 323 (594) Q Consensus 253 ~lTP~~~~~~~~s~~g~-~~~~Pv~~g~~v~F~~~~--g~~v~e~~~~~~~d~~~~~dls------~~a~hl~~~~~~~~ 323 (594) ..+|..+.-......++ ....-...|+.+++.... +.....+..+ |++.-..+. +....|+. T Consensus 302 ~at~~~Ia~~L~~~i~~~~~~~~~~~g~~i~i~~~~~~~~~~~~~~~~---~g~~~~~~~~~~~~v~~~~~Lp~------ 372 (680) T protein:vir:17 302 GASTSDIVTGLSAAINGLGTFTAESIGNVIRVRYSDPTRTDEFTMSAR---GGTSGTGLESIKYSVDTLAELPT------ 372 (680) T ss_pred ceeHHHHHHHHHHhhcccCcEEEEECCCEEEEEeccCCCceEEEeecc---CCCCceeeeeeeeeecccccccc------ Confidence 01111110000000001 111122334443332221 2222332211 222111111 11112221 Q ss_pred CCceEEEEEeCCCCeE-EEEEcCCCeE---EEEEEecccc------eEeEEEeecCCCeEEEEEEEccCCCCEE-EEEEE Q lcl|Aclame:pro 324 GASVRRVAYISDAAKS-LWVVLENGQI---NYCCFDRTTD------TKAWTQLELSGGKVIDIAAAFNPDSDYA-YVAVV 392 (594) Q Consensus 324 ~~~i~~~a~~~~p~~~-~~~~~~dg~~---~~~ty~~eq~------v~aW~~w~~~~g~v~~v~~~~~~~~d~~-y~~v~ 392 (594) +.|+-. +-++...+.. .++.|+..-+ -..|..- ...+... +.....+ |.+++ T Consensus 373 ----------~a~~g~~v~v~~~~~~~~~~Yyv~~~~~~~~~~~~~~~~W~E~-~~~~~~~------~~~~~tmp~~l~r 435 (680) T protein:vir:17 373 ----------KCWNDYQVAVRNTQDTEVDDYYVKFETDVEDADVPGSGYWVET-VKNGDDG------GLVDDTMPHVLVR 435 (680) T ss_pred ----------ccCCCcEEEEEeCCCCcccceEEEEeccCcccCcccccceeec-ccCcccc------eeccCcceEEEEE Confidence 122221 2222222222 2334433111 1134321 1122111 1112223 33444 Q ss_pred ECCCCCcceeEEEEEe------ccCccc-ccc-ee-eeeeEEccCcccccccCCcccC-------ceeEEEEeCCeec-- Q lcl|Aclame:pro 393 RSKAINGVQKNYTVLE------KISSPR-TDW-KR-ADGWVVAQVNQNGDVLNLDRYI-------GRTAVIFSKYGLE-- 454 (594) Q Consensus 393 r~~~~~g~~~~~~~le------~~~~~~-~~~-~~-~~~~~~~~~~~~~~~~~l~~l~-------g~tv~i~adg~~~-- 454 (594) ... |... +..+. .+..+. -++ .. ...|+.. +. ..+..-.+. ++++..-.-|.+. T Consensus 436 ~~~---g~f~-~~~~~~~~~~~~~~~r~~Gdd~tnp~psF~~~-G~---~p~~v~f~q~RL~f~s~~~v~~Srtgd~~nF 507 (680) T protein:vir:17 436 NAL---GDFT-FSSLNNSSYGKTWADRSVGSEDTNPHPTFTES-GN---GIYGMFMYKNRLGFLTQDAVIMSQVGDYFNF 507 (680) T ss_pred ccC---ceeE-EEeeccccccccccccccCCcccCCCcccccC-CC---CceEEEEEcceEEEeeCCeEEEEccCCcccc Confidence 322 1110 10110 010000 000 00 0011110 11 111111122 2333222222211 Q ss_pred cCeE----ecCCceEEEEecCCCCCeEEEeEeeeeEEEecc---eeeeCCCCccce-eeEEEEEEE-EEEEcccc-eEEe Q lcl|Aclame:pro 455 AEVE----VNNIGLTHRINGYDPNTVYYVGYKMDSYFRTLT---PSNGDMKKSMFG-SKIRISKVQ-LALFDSIE-PTVN 524 (594) Q Consensus 455 ~~~~----v~~~~~tl~~~~~~~~~~v~VG~~y~~~v~~~~---~~~~~~~g~~~~-~~~ri~~v~-v~l~~S~g-~~v~ 524 (594) .... .+++.+.+.+..+..+ .+.=..++.-.+-++. .++-..++..+. ...++.+.. ........ ..++ T Consensus 508 ~~~t~~~~~DdD~I~~~~ss~~~~-~i~~~v~~~~~L~l~t~g~q~~ls~~~~~lTP~~~~i~~~s~~~~~~~~~Pv~vG 586 (680) T protein:vir:17 508 YATSGVTISDADPIDMATSDTKPV-KLEAAISSTSGAILFGNQAQFRLSSPDESFGPKTATLDKISNYTYESKADPVQTG 586 (680) T ss_pred cccccccCCCCccEEEEEcCCcce-eeeEEeecCCcEEEEecCeEEEEecCCceecceeEEEEEEEeecccCCCCceEeC Confidence 1111 1344555544433322 2221233322121111 011111111221 122233222 22222111 1222 Q ss_pred eeec-ccccccc--ccccccccCCCccccccCcEEEEeecCCcCcceEEEEEECCCcCEEEEEEEEEEEeccC Q lcl|Aclame:pro 525 GEPA-DDRSTDD--IMDARLLDFSSNSGSSNGTRLVDYNPLGWENDGKMVIAVEQPFLCEVVGVFSVVQSNKV 594 (594) Q Consensus 525 ~~~~-~~~~~~~--~~~~~~~~~~~~~~~~tg~~~v~~~~~g~~~~~~v~I~~~~P~P~tIlai~~~v~~n~~ 594 (594) .... ..+.+.. +... ...+..+ .....+...-.+ ..-......+.+..+-|+.++-+ +-.-|++ T Consensus 587 ~~v~Fv~~~g~~s~vre~-~y~~~~d-~y~a~DlT~~a~--hl~~g~v~~~~~~~~~~~~~~~~--~~~~~~l 653 (680) T protein:vir:17 587 VSMIFPTNMGTYSSVYEL-STESAKG-TPVIEDSSRVIP--RLIPSGLTWSTASMNNDTVFFGN--AKKGRNV 653 (680) T ss_pred CeEEEeecCCCcceEEEE-eeeeccC-ceehhhHHHHHH--HhcCCceEEEEeeCCCCeEEEEE--EcCCCEE Confidence 1110 0010100 0000 0000000 000011110000 11122334455556667544433 2233333 No 34 >protein:vir:105563 Length: 396 # NCBI annotation: hypothetical protein # Family: family:all:27455 # MgeID: mge:1540 # MgeName: F116 # Cross-refs: genbank:acc:YP_164316;genbank:gi:56692963;genbank:GeneID:3197174 Probab=91.32 E-value=0.016 Score=30.37 Aligned_cols=307 Identities=11% Similarity=0.053 Sum_probs=122.7 Q ss_pred CCccccccccc-ceecchhcccchHHHHHHHHHhhcCcEEeecCCceecCcceeeeeeeCCC-CCEEEEEEEeCCC-ceE Q lcl|Aclame:pro 1 MADFSQTSFKG-GVIAPRLQFNEYESAYHHSIEDAVNFVVTEQGSLITRCGSEEVGLCQDGE-VRLFRLPAVDAPS-NDV 77 (594) Q Consensus 1 m~~~~~~~f~~-Ge~sp~l~~r~d~~~y~~~~~~~~N~~~~~~G~~~~rpg~~~~~~~~~~~-~~~rlipF~~s~~-q~y 77 (594) |++....-|++ --++|+-.---|-+.=...+|.+.|+-+...|-+.||-|.+-+..-+..+ .+.-|--|.|... +++ T Consensus 1 ~~~~~~~~~~ginnv~~e~~l~~~~~~~~~~~r~a~nvdi~~~G~~~~r~~~tr~~~g~l~~~~~~~~~~~~~~~~~~tl 80 (396) T protein:vir:10 1 MATTSLVPLAGINNVAEDAALQRGGESPRLYVRDAVNIDLSPAGKAQLRASVRQVTDQPFRQLWQSPLHGDAFGALGDQW 80 (396) T ss_pred CcceeeeeeecccccccccccccCCCcccceeeeeeeecccCCCchhhhccCcccCCceecccccCccccceeeeCCceE Confidence 88754333332 11222211000001112357788899999999999999988766322110 0011112222111 111 Q ss_pred E-EE-----------EeCCe-------EEEEeCCceEEecccccccccceeecccch------hhhcccee--E------ Q lcl|Aclame:pro 78 I-VE-----------VGNTN-------IAVWVNDVRQVVANTPSEWRNTIDRIQTAY------DTIGDDAG--A------ 124 (594) Q Consensus 78 ~-le-----------~g~~~-------~r~~~~~~~~~~~~~~~~~~~~~~~tpyta------~~l~~i~~--a------ 124 (594) . +. .+.+- -|+|..++..-....+.........+|-.+ ..+..-++ + T Consensus 81 ~~~~~~~w~~~~~v~v~~~pva~d~~~~Rvy~t~~~~p~~~~~~~~y~L~vp~P~~a~~~a~~Gsl~~~~~~Y~~t~V~~ 160 (396) T protein:vir:10 81 GKVDPHSWTFEPLAQIGEGDLSHEVLNNRVCVAGTAGIFTYDGAQAERLTLDTPAPPLLVAGAGSLSQGTYGAAVAWLRG 160 (396) T ss_pred EEEeCCeEEEEeeeeeccCchhccccCCeEEEEcCCCceeeeCCcceecCcCCCcccccccccCccCCceEEEEEEEEec Confidence 0 00 00000 022221111110000000000000111100 01111111 0 Q ss_pred ---------------ecCc-EEEE---ecCCccceeEEeeccCc---------------eeecccccceeeeccccCC-- Q lcl|Aclame:pro 125 ---------------ANTG-RLIM---VHPALQPKRLYRDNNNA---------------WQFVNMHTGAVPAEWSPSN-- 168 (594) Q Consensus 125 ---------------q~ad-v~~~---v~~~~~p~~L~R~~~~~---------------w~~~~~~~~~~p~~~~~~g-- 168 (594) ..++ ++.+ ..++..-.+|+|...+. ..+...+| ..+ .....+ T Consensus 161 ~gEEs~p~~~S~~v~~~gg~~vtl~~~~~~~i~~~RiYrS~~~G~~~~l~aE~~a~~~s~vlPs~~w-~gp-P~~~~gL~ 238 (396) T protein:vir:10 161 PQESAPSLIAFAEVTDAGALEVTFPLCLDASVTGARLYLTRANGGELLLAGDYPLGAATVILPTLPE-LGR-PAQFRHLS 238 (396) T ss_pred CCCcCcccccccccCCCCCcEEEEEcccCCCcceEEEEEeCCChhhhhheehhccceeeeeeecCCC-CCC-Cccccccc Confidence 0011 1111 12333344677653321 11111111 111 112222 Q ss_pred -cce--EEEEEeceEEEEeCCCCCcEEEEEeccccccccc-cccCCCCccEEEEEcCCccEEEEEEcCCCEEEEecCcEE Q lcl|Aclame:pro 169 -YPQ--TVGIFQNRVWYVGSPVHRTYFWATRAGKLEDIAP-STANNPNDPISFVGIMEGTPCWIIASSDVLTIGTTINDY 244 (594) Q Consensus 169 -~Ps--~v~f~~~RL~~~~~~~~p~~v~~S~~gd~~nF~~-~t~~~d~d~i~~~~s~~~~~i~~~~~~~~L~l~t~~~q~ 244 (594) -|. .+.+|.+||+++.+. .||+|...-++=++. ..-.+-+.+| .-..+...+|+++|+++-| T Consensus 239 pmP~G~~~A~faGRi~~A~Gn----~V~FSEp~~Ph~~~~~~~~~~~~~~I----------v~lapv~~gL~Vgt~~~~y 304 (396) T protein:vir:10 239 PMPTGKHLAYWRGRLLIARAN----VLRFSEALAYHLHDERYGFVQMPQRI----------TFVQPVDGGIWVGQVDHVA 304 (396) T ss_pred cCchhHhhhhhcceEEEEeCC----EEEEecCCCCceecchhccCCCCCce----------EEEEEecCeEEEEEcCcEE Confidence 232 468999999999996 599999987632221 1111111123 2334558999999999999 Q ss_pred EEecCCCcccCcceeEEEeeeec----ccC---------CcccEEeCCeEEEEEcCCCEEEEEEeeecccceeecchhhh Q lcl|Aclame:pro 245 QLAASTGVSVTAATAILRRSSVQ----GTA---------AVQGIPAEEQVIFCSRNKSKVYAMNYVREQDNWIPDEMSSQ 311 (594) Q Consensus 245 ~l~~~~~~~lTP~~~~~~~~s~~----g~~---------~~~Pv~~g~~v~F~~~~g~~v~e~~~~~~~d~~~~~dls~~ 311 (594) .+.|.. |++.+..+.... ++. .-..+..|..++|+++.| +.--.-+ +- +..+ T Consensus 305 ~~~G~d-----P~sms~~~l~~~~pvp~S~v~~p~~~~s~rs~~~~~~~~lwas~dG--l~~g~~~----G~----v~~l 369 (396) T protein:vir:10 305 FLDGAD-----PASLSVSRRASRAPVPGSAVLVPAEVVGTNASPDGSPVAVWLAENG--YVMGTSS----GA----IAEV 369 (396) T ss_pred EEEcCC-----hhHcceeecccCCCcccchhcccchhhhcccccccCcEEEEccCCc--EEEEcCC----ce----eeee Confidence 998854 455444444221 211 112345688899999988 3221111 11 1111 Q ss_pred hhhhhcccccccCCceEEEEEeCCCCeEEEEEc Q lcl|Aclame:pro 312 AQHLFTPISSAKGASVRRVAYISDAAKSLWVVL 344 (594) Q Consensus 312 a~hl~~~~~~~~~~~i~~~a~~~~p~~~~~~~~ 344 (594) ...++.. .....-.+-...++.+.+.. T Consensus 370 ~~~~i~p------~~~~A~~~~~~drRy~~~~~ 396 (396) T protein:vir:10 370 HAGVLAG------ITGRAGTSVVFDRRLLTAVS 396 (396) T ss_pred cccccCC------CcccceEEEeecCeEEEEeC Confidence 1222211 11011011111222222222 No 35 >protein:vir:105525 Length: 472 # NCBI annotation: phage DNA stabilization protein # Family: family:all:1540 # MgeID: mge:1463 # MgeName: phiSG1 # Cross-refs: genbank:acc:YP_516194;genbank:gi:89885997;genbank:GeneID:3964385 Probab=91.23 E-value=0.017 Score=30.30 Aligned_cols=438 Identities=11% Similarity=0.033 Sum_probs=175.2 Q ss_pred CCcccccccccceecchhcccchHHHHHHHHHhh-cCcEEe------ecCCceecCcceeeeeeeCCCCCEEEEEEEeCC Q lcl|Aclame:pro 1 MADFSQTSFKGGVIAPRLQFNEYESAYHHSIEDA-VNFVVT------EQGSLITRCGSEEVGLCQDGEVRLFRLPAVDAP 73 (594) Q Consensus 1 m~~~~~~~f~~Ge~sp~l~~r~d~~~y~~~~~~~-~N~~~~------~~G~~~~rpg~~~~~~~~~~~~~~rlipF~~s~ 73 (594) |+.. |- |++.|-.--.+=+.++..| -||.+. ..|-++-=||++....++ ++.|=+-+.-.. T Consensus 1 m~~~-q~--------pl~~g~~~~~~~~~~~~~lpvN~y~~p~~~~~ss~~lr~~PG~~~~~~~~---g~~RG~~~~~~~ 68 (472) T protein:vir:10 1 MAIM-QL--------PLLRGLGKARDDADYIDALPVNMLATPKPVLNASGYLRSFPGITHKAEVA---GVSRGVQYNTHE 68 (472) T ss_pred CCce-ee--------ecccccccCccccCceeeeeeeeeeccccccccceeecccCCceeecCCC---cccceeEeeeeC Confidence 5542 10 2222111111122344455 666543 355566668887776664 334443222223 Q ss_pred CceEEEEEeCCeEEEEeCCceEEecccccccccceeecccchhhhccceeEecCcEEEEecCCccce-------eEEeec Q lcl|Aclame:pro 74 SNDVIVEVGNTNIAVWVNDVRQVVANTPSEWRNTIDRIQTAYDTIGDDAGAANTGRLIMVHPALQPK-------RLYRDN 146 (594) Q Consensus 74 ~q~y~le~g~~~~r~~~~~~~~~~~~~~~~~~~~~~~tpyta~~l~~i~~aq~adv~~~v~~~~~p~-------~L~R~~ 146 (594) ..-|...-+.-|. +. .++.+|. ..|.+...|.+..+. .+++.. T Consensus 69 ~~lY~V~G~~Ly~-v~--------------------------~~vG~ia---gsg~VsMa~~~~~q~v~v~g~~~~y~y~ 118 (472) T protein:vir:10 69 KTVYRGLGNQLYK-GH--------------------------KPIADLA---GKGRISMAFSRNSQAVVAAGKMTLYRYD 118 (472) T ss_pred CeEEEEecceEEE-EE--------------------------eeeeeec---ccccEEEEecCCceEEEEecceeEEEec Confidence 3333332222111 10 0111111 112222222221111 223332 Q ss_pred cCceeecccccceeeeccc-cCCcceEEEEEeceEEEEeCCCCCcEEEEEeccccccccccccCCCCccEEEEEcCCccE Q lcl|Aclame:pro 147 NNAWQFVNMHTGAVPAEWS-PSNYPQTVGIFQNRVWYVGSPVHRTYFWATRAGKLEDIAPSTANNPNDPISFVGIMEGTP 225 (594) Q Consensus 147 ~~~w~~~~~~~~~~p~~~~-~~g~Ps~v~f~~~RL~~~~~~~~p~~v~~S~~gd~~nF~~~t~~~d~d~i~~~~s~~~~~ 225 (594) ...-++.++. ......+ .-+-+..|.|..+|++|.-... +.++.|...|-.-+ +.-|+...+.++.+.+ T Consensus 119 g~~~t~~~~~--~~~~it~~dl~~~~~v~~~dGyfV~~~~gt--~~~~iS~L~d~s~~------~~~~~FatAE~~pD~I 188 (472) T protein:vir:10 119 GTVKTLENWP--KEKKYTQYDIGNVRDMCHLRGRYVWCKDGS--DIFGVTDLEDESHP------DRYRALYRAESQPDGI 188 (472) T ss_pred cchhhhhhcc--ccccCCccccCCceeEEEeCceEEEeecCC--ceEEEeecCCcccC------CcccceeeecCCCCce Confidence 2221211111 1111111 1234567899999988774432 23446654331100 1112222345666777 Q ss_pred EEEEEcCCCEEEEecCcE--EEEecCCCcccCcceeEEEe--eeecccCCc-ccEEeCCeEEEEEcCCC---EEEEEEee Q lcl|Aclame:pro 226 CWIIASSDVLTIGTTIND--YQLAASTGVSVTAATAILRR--SSVQGTAAV-QGIPAEEQVIFCSRNKS---KVYAMNYV 297 (594) Q Consensus 226 i~~~~~~~~L~l~t~~~q--~~l~~~~~~~lTP~~~~~~~--~s~~g~~~~-~Pv~~g~~v~F~~~~g~---~v~e~~~~ 297 (594) +-.+...+.|++|.+..- |..+|..+-+...- .-.+ .=..||+.- .=..+|++++|++.... .|+.+ T Consensus 189 vgi~~~~~~i~lfG~~TiEvw~ntG~a~fpf~r~--~~~pg~~iq~Gcaa~~sv~~~~~s~~~l~~d~~g~~~V~~~--- 263 (472) T protein:vir:10 189 IGIDSWRDFIVCFGASTIEYFSLTGAADGQSAIY--AAQPALMVEKGIAGTHCKTRLGDAHVIISHQATGAPSVFLI--- 263 (472) T ss_pred EEEEeeccEEEEEeccceEEEEecCCCCcceeee--ccCccceeeecccCchhhhhhCceEEEEecCCCcceEEEEc--- Confidence 788889999999988775 78887654322110 0000 013566432 22458999999987643 23332 Q ss_pred ecccceeecchhh-hhhhhhcccccccCCceEEEEEeCCCCeEEEEEcCCCeEEEEEEecccceE--eEEEeecCCC--e Q lcl|Aclame:pro 298 REQDNWIPDEMSS-QAQHLFTPISSAKGASVRRVAYISDAAKSLWVVLENGQINYCCFDRTTDTK--AWTQLELSGG--K 372 (594) Q Consensus 298 ~~~d~~~~~dls~-~a~hl~~~~~~~~~~~i~~~a~~~~p~~~~~~~~~dg~~~~~ty~~eq~v~--aW~~w~~~~g--~ 372 (594) ++|+++-||- -++..++..+...-..-...+|+.+-+.+.++...|. .+.|+-.-..+ .|+.-..+.+ . T Consensus 264 ---~g~q~~rIST~aIE~~i~~y~~~e~~dA~~~s~~~eGH~fy~LtfP~~---Tw~yD~at~~~~~~w~~~~~g~~~~~ 337 (472) T protein:vir:10 264 ---NQAQATSIATATIEKILRSYTHDELASAVMETVRFDSHELVLIHLSRQ---VLCYDAAANQNGLQWSLLKTGFYHAP 337 (472) T ss_pred ---cCceEEEecCHHHHHHHHhCCcccccceeEEEEEeCCeEEEEEEcCCe---eEEEeccCCccceeeeeeecCCccCc Confidence 3567777743 3445544322111122334455566666666666653 33344211111 2432111111 1 Q ss_pred EEEEEEEccCCCCEEEEEEEECCCCCcceeEEEEEeccCcccccceeeeeeEEccCcccccccCCcccCceeEE-EEeCC Q lcl|Aclame:pro 373 VIDIAAAFNPDSDYAYVAVVRSKAINGVQKNYTVLEKISSPRTDWKRADGWVVAQVNQNGDVLNLDRYIGRTAV-IFSKY 451 (594) Q Consensus 373 v~~v~~~~~~~~d~~y~~v~r~~~~~g~~~~~~~le~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~g~tv~-i~adg 451 (594) .+..+.+...+ -+++ = +.-||...+ -.+.... -.|+.+. +. T Consensus 338 ~Ra~~~~~~~g---~~~v-G--D~~ng~l~~----ld~~~~t-------------------------d~g~pi~~~~--- 379 (472) T protein:vir:10 338 YRGIDFMFADH---HLTC-G--DKNDSLLGQ----LDFASSA-------------------------QYEKPQEHVL--- 379 (472) T ss_pred eEEEEEEEeCC---eEEE-E--EcCCCeEEE----EcCcCcC-------------------------CCCceeEEEe--- Confidence 22222222111 1111 1 111221110 0000000 0111000 00 Q ss_pred eeccCeEecCCceEEEEecCCCCCeEEEeEeeeeEEEecceeeeCCCCccceeeEEEEEEEEEEEcccceEEeeeecc-- Q lcl|Aclame:pro 452 GLEAEVEVNNIGLTHRINGYDPNTVYYVGYKMDSYFRTLTPSNGDMKKSMFGSKIRISKVQLALFDSIEPTVNGEPAD-- 529 (594) Q Consensus 452 ~~~~~~~v~~~~~tl~~~~~~~~~~v~VG~~y~~~v~~~~~~~~~~~g~~~~~~~ri~~v~v~l~~S~g~~v~~~~~~-- 529 (594) ..+.... ++..+ +. +.+++. .|..+.. .++.|+..+.++-....+... T Consensus 380 --~tp~~~~------------~n~Rv-----fd-----~el~~~--tGvg~~~----~~v~L~wSddg~~~~~~~~~~~~ 429 (472) T protein:vir:10 380 --YTPLFKA------------DNARV-----FD-----FELEAS--TGVAHIA----DRLFLSATADGLHFGREQMINQN 429 (472) T ss_pred --eccceec------------CCCeE-----EE-----EEEEee--CCcCccC----ceEEEEEeccccccchhHHHhhc Confidence 0000000 01111 11 111121 2211111 135666655433322211100 Q ss_pred ccccccccccccccCCCccccccCcEEEEeecCCcCcc---eEEEEEECCCcCEEEEEEEEE Q lcl|Aclame:pro 530 DRSTDDIMDARLLDFSSNSGSSNGTRLVDYNPLGWEND---GKMVIAVEQPFLCEVVGVFSV 588 (594) Q Consensus 530 ~~~~~~~~~~~~~~~~~~~~~~tg~~~v~~~~~g~~~~---~~v~I~~~~P~P~tIlai~~~ 588 (594) -+++. +.+......|..++ .++++....|.+..++++-+| T Consensus 430 g~~~~-------------------~~r~~w~RlG~ar~~vgf~~rv~~s~pv~~~~~~a~~e 472 (472) T protein:vir:10 430 APFAY-------------------DRRILWRRMGRVRKNLGFKVRVITSSPVTLSGCQIRME 472 (472) T ss_pred Cccch-------------------hheeeeheeeccccccceEEEEEEecccccccceeeeC Confidence 01110 11222333344433 578999999999999999999 No 36 >protein:vir:2109 Length: 472 # NCBI annotation: head completion protein # Family: family:all:1540 # MgeID: mge:46 # MgeName: P22 # Cross-refs: genbank:acc:NP_059633;genbank:gi:9635541;genbank:GeneID:1262840 Probab=86.72 E-value=0.044 Score=28.04 Aligned_cols=447 Identities=11% Similarity=0.005 Sum_probs=185.3 Q ss_pred CCcccccccccceecchhcc-cc--hHHHHHHHHHhhcCcEEeecCC------ceecCcceeeeeeeCCCCCEEEEEEEe Q lcl|Aclame:pro 1 MADFSQTSFKGGVIAPRLQF-NE--YESAYHHSIEDAVNFVVTEQGS------LITRCGSEEVGLCQDGEVRLFRLPAVD 71 (594) Q Consensus 1 m~~~~~~~f~~Ge~sp~l~~-r~--d~~~y~~~~~~~~N~~~~~~G~------~~~rpg~~~~~~~~~~~~~~rlipF~~ 71 (594) |+.. | -|.+.| +. .-+.|.+++. -||.+.|.++ ++--||....++++ ++.|=+=|.- T Consensus 1 m~~~-q--------~Pl~~g~~~~~~~~d~~~~~p--VN~~a~~~~~~~s~~~lr~tPG~~~~~~~~---g~~RG~~~~t 66 (472) T protein:vir:21 1 MPIQ-Q--------LPMMKGMGKDFKNADYIDYLP--VNMLATPKEILNSSGYLRSFPGITKRYDMN---GVSRGVEYNT 66 (472) T ss_pred CceE-E--------eeccccccccccccceeeeee--eeeeeeccCCcccceeeeecCCcceeccCC---Cceeeeeecc Confidence 5532 1 133333 22 2224444544 7999988877 34447877777663 3444442211 Q ss_pred CCCceEEEEEeCCeEEEEeCCceEEecccccccccceeecccchhhhccceeEecCcEEEEecCCccceeEEeeccCcee Q lcl|Aclame:pro 72 APSNDVIVEVGNTNIAVWVNDVRQVVANTPSEWRNTIDRIQTAYDTIGDDAGAANTGRLIMVHPALQPKRLYRDNNNAWQ 151 (594) Q Consensus 72 s~~q~y~le~g~~~~r~~~~~~~~~~~~~~~~~~~~~~~tpyta~~l~~i~~aq~adv~~~v~~~~~p~~L~R~~~~~w~ 151 (594) -.+--|..- |..=-++-+..+ .. + -...+..+.+...+-++..+.. ..++.+...++ T Consensus 67 ~~~~ly~V~-G~~LY~v~~~~G-----~i-----------~----gsgrVsMa~n~~~~~v~~~~~~--~~Y~~~~~~~t 123 (472) T protein:vir:21 67 AQNAVYRVC-GGKLYKGESEVG-----DV-----------A----GSGRVSMAHGRTSQAVGVNGQL--VEYRYDGTVKT 123 (472) T ss_pred cCCeEEEEe-CCceEEEeeeee-----ee-----------c----ccccEEEeeCCeEEEEEECCce--eEEEEecchhh Confidence 111112221 211111211100 00 0 0011222323322222222211 12233333333 Q ss_pred ecccccceeeeccccCCcceEEEEEeceEEEEeCCCCCcEEEEEeccccccccccccCCCCccEEEEEcCCccEEEEEEc Q lcl|Aclame:pro 152 FVNMHTGAVPAEWSPSNYPQTVGIFQNRVWYVGSPVHRTYFWATRAGKLEDIAPSTANNPNDPISFVGIMEGTPCWIIAS 231 (594) Q Consensus 152 ~~~~~~~~~p~~~~~~g~Ps~v~f~~~RL~~~~~~~~p~~v~~S~~gd~~nF~~~t~~~d~d~i~~~~s~~~~~i~~~~~ 231 (594) +...... ....-..-+.+..|+|..+|++|.-... +..+.|-..|=+..+ +=++...+.++.+.++..+.. T Consensus 124 ~~~~~~d-~~f~~~dl~~~~dv~f~dGyfV~~~~gt--~~f~is~l~d~~~~~------~y~~FatAE~~pD~Iv~i~~~ 194 (472) T protein:vir:21 124 VSNWPAD-SGFTQYELGSVRDITRLRGRYAWSKDGT--DSWFITDLEDESHPD------RYSAQYRAESQPDGIIGIGTW 194 (472) T ss_pred hhcccCc-cccccccccceeEEEEecceEEEccCCc--ceeEEecCCCCcccc------CCccceeeccCCCceEEEEee Confidence 2221100 0000011233346899999988874221 123444333211100 001122245666777888889 Q ss_pred CCCEEEEecCcE--EEEecCCCcccCcceeEEEeee----ecccCCc-ccEEeCCeEEEEEcCCC---EEEEEEeeeccc Q lcl|Aclame:pro 232 SDVLTIGTTIND--YQLAASTGVSVTAATAILRRSS----VQGTAAV-QGIPAEEQVIFCSRNKS---KVYAMNYVREQD 301 (594) Q Consensus 232 ~~~L~l~t~~~q--~~l~~~~~~~lTP~~~~~~~~s----~~g~~~~-~Pv~~g~~v~F~~~~g~---~v~e~~~~~~~d 301 (594) .+.|++|.+..- |..+|.. ++..+-..+++ ..||+.- .=..+|++++|++..+. .|+.+ + T Consensus 195 ~~~l~lfG~~TiEvw~ntG~a----d~~~fpy~r~~g~~iq~Gcaa~~sv~~~~~s~~~l~~~~~g~~~V~~~------~ 264 (472) T protein:vir:21 195 RDFIVCFGSSTIEYFSLTGAT----TAGAALYVAQPSLMVQKGIAGTYCKTPFADSYAFISHPATGAPSVYII------G 264 (472) T ss_pred ccEEEEEeccceEEEEecCCC----CcCcCceEEcCcceeeecccCcchhhecCceEEEEecCCCcccEEEEc------c Confidence 999999888775 7777753 23344455544 4677532 23559999999988764 23332 3 Q ss_pred ceeecchhh-hhhhhhcccccccCCceEEEEEeCCCCeEEEEEcCCCeEEEEEEecccc--eEeEEEeecCCC--eEEEE Q lcl|Aclame:pro 302 NWIPDEMSS-QAQHLFTPISSAKGASVRRVAYISDAAKSLWVVLENGQINYCCFDRTTD--TKAWTQLELSGG--KVIDI 376 (594) Q Consensus 302 ~~~~~dls~-~a~hl~~~~~~~~~~~i~~~a~~~~p~~~~~~~~~dg~~~~~ty~~eq~--v~aW~~w~~~~g--~v~~v 376 (594) +|+++-||- -++..++......-..-...+|+.+-+.+..+...|. .+.|+-.-. -.-||.-+.... .-+.+ T Consensus 265 g~qa~rIST~aIE~~i~~y~~~e~~~A~~~t~~~eGH~fy~LtfP~~---Tw~yD~at~~~~e~W~~~~sg~~~~~~R~~ 341 (472) T protein:vir:21 265 SGQASPIATASIEKIIRSYTAEEMATGVMETLRFDSHELLIIHLPRH---VLVYDASSSQNGPQWCVLKTGLYDDVYRGV 341 (472) T ss_pred CceeEEecCHHHHHHHHhcCCccccceEEEEEEeCCeEEEEEEcCCe---eEEEEcccCccCceeeeeccCCCcCceeEE Confidence 567777753 3444444322111223344566677777776677764 334542211 112776554111 23444 Q ss_pred EEEccCCCCEEEEEEEECCCCCcceeEEEEEeccCcccccceeeeeeEEccCcccccccCCcccCceeEEEEeCCeeccC Q lcl|Aclame:pro 377 AAAFNPDSDYAYVAVVRSKAINGVQKNYTVLEKISSPRTDWKRADGWVVAQVNQNGDVLNLDRYIGRTAVIFSKYGLEAE 456 (594) Q Consensus 377 ~~~~~~~~d~~y~~v~r~~~~~g~~~~~~~le~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~g~tv~i~adg~~~~~ 456 (594) +++.... -.++ = +--||.-.. | .++...+.+... +...+ .+ T Consensus 342 ~~~~~~g---~~iv-G--D~~nG~ly~---L-~fd~~~~~d~~~--------------------~~~r~---------~p 382 (472) T protein:vir:21 342 DFMYEGN---QITC-G--DKSEAVVGQ---L-QFDISSQYDKQQ--------------------EHLLF---------TP 382 (472) T ss_pred EEEeeCC---eEEE-E--EcCCCeEEE---E-EecccccCCCcC--------------------cEEEE---------cc Confidence 4433211 1111 1 112222211 1 111111111000 00000 01 Q ss_pred eEecCCceEEEEecCCCCCeEEEeEeeeeEEEecceeeeCCCCccceeeEEEEEEEEEEEcccceEEeeeeccccccccc Q lcl|Aclame:pro 457 VEVNNIGLTHRINGYDPNTVYYVGYKMDSYFRTLTPSNGDMKKSMFGSKIRISKVQLALFDSIEPTVNGEPADDRSTDDI 536 (594) Q Consensus 457 ~~v~~~~~tl~~~~~~~~~~v~VG~~y~~~v~~~~~~~~~~~g~~~~~~~ri~~v~v~l~~S~g~~v~~~~~~~~~~~~~ 536 (594) ..+..+ ..+ +..+++. ..|..+.. .++.|+..+- |..++.+..... T Consensus 383 ~~~~dn------------~R~-----fd~eve~-------~~Gv~q~~----d~v~L~wSdd-G~~~~~~~~~~~----- 428 (472) T protein:vir:21 383 LFKADN------------ARC-----FDLEVES-------STGVAQYA----DRLFLSATTD-GINYGREQMIEQ----- 428 (472) T ss_pred ceeCCC------------CEE-----EEEeeec-------cCCCCCcC----cEEEEEeecc-ccccccceeecc----- Confidence 111111 111 1122222 22333333 2566666654 444443321110 Q ss_pred cccccccCCCccccccCcEEEEeecCCcCcc-eEEEEEECCCcCEEEEEEEEEEE Q lcl|Aclame:pro 537 MDARLLDFSSNSGSSNGTRLVDYNPLGWEND-GKMVIAVEQPFLCEVVGVFSVVQ 590 (594) Q Consensus 537 ~~~~~~~~~~~~~~~tg~~~v~~~~~g~~~~-~~v~I~~~~P~P~tIlai~~~v~ 590 (594) .+++. =+.+......|..++ ..++|+-..|.|.+|.++..+++ T Consensus 429 --g~~g~---------~~tr~~~~RlG~~r~~v~f~~r~~~~~~~~l~g~~~~~E 472 (472) T protein:vir:21 429 --NEPFV---------YDKRVLWKRVGRIRRLIGFKLRVITKSPVTLSGCQIRLE 472 (472) T ss_pred --CCccc---------hhcceeeeeeeecccceeEEEEEEecCcceeeeeEEeeC Confidence 00110 011222333444433 33666666677777777777766 No 37 >protein:vir:352 Length: 536 # NCBI annotation: hypothetical protein # Family: family:all:3197 # MgeID: mge:9 # MgeName: Mx8 # Cross-refs: genbank:acc:NP_203466;genbank:gi:15320622;genbank:GeneID:921729 Probab=81.93 E-value=0.081 Score=26.56 Aligned_cols=455 Identities=16% Similarity=0.138 Sum_probs=169.5 Q ss_pred CC-------c---ccccccccceecch--hcccchHHHH-HHHHHhhcCcEEeecCCceecCcceeeeeeeCCCCCE-EE Q lcl|Aclame:pro 1 MA-------D---FSQTSFKGGVIAPR--LQFNEYESAY-HHSIEDAVNFVVTEQGSLITRCGSEEVGLCQDGEVRL-FR 66 (594) Q Consensus 1 m~-------~---~~~~~f~~Ge~sp~--l~~r~d~~~y-~~~~~~~~N~~~~~~G~~~~rpg~~~~~~~~~~~~~~-rl 66 (594) |. + ....+|. .|. +..+.+++.= ..+|..|+||+|.+.|=..|| |.+--+... ..+. -. T Consensus 2 ~~~~a~r~~~~~~~~~~~~p----APv~G~~t~~~~A~m~~~~A~vldN~fpt~~g~r~R~-G~~~~at~~--~~~v~s~ 74 (536) T protein:vir:35 2 MPLRARRVPPPPSIQEAHLP----APVGGLNTVSAGSAMPVSDCLQGFNLIASELGLRSRL-GYREWCTGL--GVPARST 74 (536) T ss_pred CccccccCCCCccceeeeeC----ccccceeccchhhcCCCCceEEEeecCCChhhhhhhc-cchhHhcCC--ccceEEe Confidence 22 1 1223343 232 2334444332 248899999999999866655 444222211 1223 34 Q ss_pred EEEEeCC---CceEEEEEeCCeEEEEeCCceEEecccccccccceeecc-c---chhhhccceeEecCcE-EEEecCCcc Q lcl|Aclame:pro 67 LPAVDAP---SNDVIVEVGNTNIAVWVNDVRQVVANTPSEWRNTIDRIQ-T---AYDTIGDDAGAANTGR-LIMVHPALQ 138 (594) Q Consensus 67 ipF~~s~---~q~y~le~g~~~~r~~~~~~~~~~~~~~~~~~~~~~~tp-y---ta~~l~~i~~aq~adv-~~~v~~~~~ 138 (594) +|+.++. ..+.++.-+... +|.-. .+. ..++.+.+- - +...+..+.++..+++ ++.++..-. T Consensus 75 ~~~~~~~~~Ga~~klf~at~~~--i~dvT-------~pa-~p~~~~~~~g~~~g~~~~w~~v~~~~~gG~~l~~~nG~~~ 144 (536) T protein:vir:35 75 LPFAGSAKSGAANRLFQTTSEG--IWDVS-------ASS-QTPTQVLTFGDQTGDAGFGVSHAFVTQRGHFLFYADETNG 144 (536) T ss_pred eeeeeccccCcceeEEEecccc--eeeee-------cCC-CCcceEEEeccCCCceeeEEEEEecCCCceEEEEEEcCCC Confidence 6776542 233444333321 33211 111 001111000 0 0111222233333444 445554444 Q ss_pred ceeEEeeccCceeecccccceeeeccc-cCCcceEEEEEeceEEEEeCCCCCcEEEEEeccccccccccccCCCCccEEE Q lcl|Aclame:pro 139 PKRLYRDNNNAWQFVNMHTGAVPAEWS-PSNYPQTVGIFQNRVWYVGSPVHRTYFWATRAGKLEDIAPSTANNPNDPISF 217 (594) Q Consensus 139 p~~L~R~~~~~w~~~~~~~~~~p~~~~-~~g~Ps~v~f~~~RL~~~~~~~~p~~v~~S~~gd~~nF~~~t~~~d~d~i~~ 217 (594) ++. +-.....|+......... +..+ ....+++|..|||||||.-... -.+|..-++..- ....++++ T Consensus 145 ~~~-~~gt~~~w~~v~~~t~~~-~i~Gv~~~~l~~i~~~knRLffvq~~s--~~awYLp~~av~--------G~A~~f~l 212 (536) T protein:vir:35 145 LFR-YSESTDTWTAVAQGTGVG-EIDGVNPANIVFVAVFKQRVWLVERDT--ARAWYLPAGAIA--------GTAQPFEM 212 (536) T ss_pred ceE-eecccCchhhcccCCccc-ccCCCCcccceeeeeEeeeEEEEEeCC--ceEEEeeccccc--------ceeeeeec Confidence 432 222222354222111100 0111 2247899999999999985432 457765443321 11112221 Q ss_pred EE----cCCcc--EEEEEEcC----CCEEEEecCcEEEEecCCCcccCcceeEEEeeeeccc-CCc--c-cEEeCCeEEE Q lcl|Aclame:pro 218 VG----IMEGT--PCWIIASS----DVLTIGTTINDYQLAASTGVSVTAATAILRRSSVQGT-AAV--Q-GIPAEEQVIF 283 (594) Q Consensus 218 ~~----s~~~~--~i~~~~~~----~~L~l~t~~~q~~l~~~~~~~lTP~~~~~~~~s~~g~-~~~--~-Pv~~g~~v~F 283 (594) .+ .+... ..|.+... +.+++.|+.||-++...++ +=+.++..++-+...|. ..+ + =+.+|.-+++ T Consensus 213 g~~~~~GGsL~~~~sWS~~~G~Gl~d~~VfvSs~GeVaVyqGsd-Ps~s~~Wsl~giy~IG~~pp~G~r~~i~~G~Dl~i 291 (536) T protein:vir:35 213 GAQFRAGGHLVGLWNWTYDGGAGMDDSLVAISGGGDVAIWQGTD-PASSATFGLRGVWSLGGSPPAGRRIATDYGGDVLV 291 (536) T ss_pred cCccccCceEccceeeccccCCCcceeEEEEecCCcEEEEecCC-CCcccceeEEEEEEeccCCCCCceEEEeecCeeEe Confidence 10 11111 12333332 3345566667766665443 56677888888877874 333 2 2568999999 Q ss_pred EEcCC-CEEEEEEeeecccceeecchhhhhhhhhcccccccCCce-EEEEEeCCCCeEEEEE-cCCCeEEEEEEecccce Q lcl|Aclame:pro 284 CSRNK-SKVYAMNYVREQDNWIPDEMSSQAQHLFTPISSAKGASV-RRVAYISDAAKSLWVV-LENGQINYCCFDRTTDT 360 (594) Q Consensus 284 ~~~~g-~~v~e~~~~~~~d~~~~~dls~~a~hl~~~~~~~~~~~i-~~~a~~~~p~~~~~~~-~~dg~~~~~ty~~eq~v 360 (594) +++.| ..|.... ..+.+... -||.-++|.+.........+- =++..-.+.+.++..+ ..+|..- .+|.-.-.- T Consensus 292 it~dGivplsq~~-q~d~~a~~--~it~~I~~~~~~~v~~~a~~~gWq~~~~P~~n~liV~~P~~~g~~~-~~fV~N~~t 367 (536) T protein:vir:35 292 LSRLGVRPLSRLV-AGEVDKDT--YVTAKVSNLFSALMLTRASLPGWSMQLHPEDNALLVTVPTYPGQPT-EQLVMALAG 367 (536) T ss_pred eecCCccchhhhh-hhhhhccc--CCCccchhhHHHHHhhccCCCccEEEEccCCCeEEEEccCCCCCCc-eEEEeeccc Confidence 99998 2333321 11222211 245445554431111111110 0122122223332222 3444432 344333334 Q ss_pred EeEEEeecCCCeEEEEEEEccCCCCEEEEE-----EEECCC-CCccee---------EEEEEeccC---cccccc----- Q lcl|Aclame:pro 361 KAWTQLELSGGKVIDIAAAFNPDSDYAYVA-----VVRSKA-INGVQK---------NYTVLEKIS---SPRTDW----- 417 (594) Q Consensus 361 ~aW~~w~~~~g~v~~v~~~~~~~~d~~y~~-----v~r~~~-~~g~~~---------~~~~le~~~---~~~~~~----- 417 (594) -+|+|++= =.- .|..+. +|.+|+= |.|.+. ++|... -..+...++ .+.... T Consensus 368 gaW~~ftg--w~a-~C~~v~---~~~LyFG~~dG~v~~~da~v~g~D~~~~~ag~~I~~~~~~af~~~G~~~~K~~~~~r 441 (536) T protein:vir:35 368 RAWFRYRD--LPI-YSSAVW---GGKLYFGTVDGRVCVNDGYVDGVLLSEPSAFTPVQWSLLSAFTNLGSARQKQVQLLR 441 (536) T ss_pred CceeeecC--Ccc-eEEEEe---cCeEEEeecCCEEEecccccCccccccCcCcceeeeccccchhhcCchHHHHHHHhh Confidence 58999752 222 232222 3677772 333221 111111 000111111 000000 Q ss_pred -----------eeeeeeEEccCcccccccCCcccCcee------EEEEeCCeeccCeEecCCceEEEEecCCCCCeEEEe Q lcl|Aclame:pro 418 -----------KRADGWVVAQVNQNGDVLNLDRYIGRT------AVIFSKYGLEAEVEVNNIGLTHRINGYDPNTVYYVG 480 (594) Q Consensus 418 -----------~~~~~~~~~~~~~~~~~~~l~~l~g~t------v~i~adg~~~~~~~v~~~~~tl~~~~~~~~~~v~VG 480 (594) ..+...+++........+.+.--.|+- +..+.++......... .-| T Consensus 442 ~~~~s~~~~p~l~l~~~~d~D~~~p~~~~~~~~~~~~Wd~s~Wd~~~Ws~~~~v~~~~~s-----------------~~g 504 (536) T protein:vir:35 442 PTLLSESATPSYEVQARYRYDFAELAPVSAMGGGSGTWDGSTWDVDVWSGEYQASQQVRG-----------------GTG 504 (536) T ss_pred hhhhhccCCceEEEEEEEEeccCCCCCcCCCCCCcccCCcccCCceecCCcceeEeeeeE-----------------ecc Confidence 000011111100000000000000000 1111111000000000 011 Q ss_pred EeeeeEEEecceeeeCCCCccceeeEEEEEEEEEEEcccceE Q lcl|Aclame:pro 481 YKMDSYFRTLTPSNGDMKKSMFGSKIRISKVQLALFDSIEPT 522 (594) Q Consensus 481 ~~y~~~v~~~~~~~~~~~g~~~~~~~ri~~v~v~l~~S~g~~ 522 (594) +-|-..+. ++ |++. .+.++..+.+.+. .+++. T Consensus 505 ~G~~is~~-----~~---g~a~-~~~~~~~~d~~~e-~G~v~ 536 (536) T protein:vir:35 505 VGVDLAIA-----IR---GTAV-ARTVLVGIDILFT-AGGLL 536 (536) T ss_pred ceEEEEEE-----Ee---eccc-cceEEEEEEEEEe-ecccC Confidence 22211111 11 2222 2344444444332 23332 No 38 >protein:vir:9268 Length: 472 # NCBI annotation: 10 # Family: family:all:1540 # MgeID: mge:164 # MgeName: ST64T # Cross-refs: genbank:acc:NP_720332;genbank:gi:24371590;genbank:GeneID:955815 Probab=77.62 E-value=0.12 Score=25.58 Aligned_cols=447 Identities=12% Similarity=0.021 Sum_probs=183.4 Q ss_pred CCcccccccccceecchhcccchHHHHHHHHHhhcCcEEe------ecCCceecCcceeeeeeeCCCCCEEEEEEEeCCC Q lcl|Aclame:pro 1 MADFSQTSFKGGVIAPRLQFNEYESAYHHSIEDAVNFVVT------EQGSLITRCGSEEVGLCQDGEVRLFRLPAVDAPS 74 (594) Q Consensus 1 m~~~~~~~f~~Ge~sp~l~~r~d~~~y~~~~~~~~N~~~~------~~G~~~~rpg~~~~~~~~~~~~~~rlipF~~s~~ 74 (594) |+.. |--+..|-.. .|.+- -|. ...+-|+.+. -.|+++-=||+.+.+.++ ++.|=+=|---.. T Consensus 1 m~~~-~ipl~~g~~~----~~~~a-~~~--~~~pvn~y~~~~~~~~ss~~Lr~~pG~~~~a~~~---G~~RG~~~~~~~~ 69 (472) T protein:vir:92 1 MPIQ-QLPMMKGMGK----DFKNA-DYI--DYLPINMLATPKEVLDSSGYLRSFPGIAKRNDVN---GVSRGVEYNTAQN 69 (472) T ss_pred Ccee-eccccccccc----cCccC-cce--eeeecccccccccccccccceeecccceeecCCC---CcccceeeeeeCC Confidence 5531 1111111100 00000 011 1225555554 356677778988887653 4444442211111 Q ss_pred ceEEEEEeCCeEEEEeCCceEEecccccccccceeecccchhhhccceeEecCcEEEEecCCccceeEEeeccCceeecc Q lcl|Aclame:pro 75 NDVIVEVGNTNIAVWVNDVRQVVANTPSEWRNTIDRIQTAYDTIGDDAGAANTGRLIMVHPALQPKRLYRDNNNAWQFVN 154 (594) Q Consensus 75 q~y~le~g~~~~r~~~~~~~~~~~~~~~~~~~~~~~tpyta~~l~~i~~aq~adv~~~v~~~~~p~~L~R~~~~~w~~~~ 154 (594) .-|+..-+..| ++-+ +.+..+. ...+..+.+...+-++..+.. ..++.+...+++.. T Consensus 70 ~ly~V~G~~Ly-~v~~-----~iG~i~g---------------sgrVsMa~n~~~~av~~~~~~--~~Y~~~~~~~t~~~ 126 (472) T protein:vir:92 70 AVYRVCGGKLY-KGEA-----VVGDVAG---------------SGRVSMAHGRTSQAVGVNGQL--IEYRYDGAVKTVSN 126 (472) T ss_pred eEEEEeCcceE-EEEe-----eEeeccC---------------cccEEEecCCeEEEEEECCce--eEEEEecchhhhhc Confidence 12222211111 1100 0000000 011223333332323222222 12333333333322 Q ss_pred cccceeeeccccCCcceEEEEEeceEEEEeCCCCCcEEEEEeccccccccccccCCCCccEE-E--EEcCCccEEEEEEc Q lcl|Aclame:pro 155 MHTGAVPAEWSPSNYPQTVGIFQNRVWYVGSPVHRTYFWATRAGKLEDIAPSTANNPNDPIS-F--VGIMEGTPCWIIAS 231 (594) Q Consensus 155 ~~~~~~p~~~~~~g~Ps~v~f~~~RL~~~~~~~~p~~v~~S~~gd~~nF~~~t~~~d~d~i~-~--~~s~~~~~i~~~~~ 231 (594) .... ....-..-+.+..|+|..+|++|.-... +.++.|-..|-+ +.|..+ + +.++.+.++..+.. T Consensus 127 ~~~d-~~f~~~dl~~~~dv~f~dGyfV~~~~gt--~~~~iS~l~d~~---------~~~~y~~fa~AE~~pD~Ivgi~~~ 194 (472) T protein:vir:92 127 WPAD-SGFTQYELGSVRDITRLRGRYAWSKDGT--DSWFITDLEDES---------HPDRYSAEYRAESQPDGIIGIGSW 194 (472) T ss_pred ccCc-cccccccccceeEEEEecceEEEccCCC--ceEEEeccCCcc---------ccccccccccccCCCCceEEEEee Confidence 1110 0000011233446899999988874221 245555544322 112221 1 34556667777888 Q ss_pred CCCEEEEecCcE--EEEecCCCcccCcceeEEEeee----ecccCCc-ccEEeCCeEEEEEcCCC---EEEEEEeeeccc Q lcl|Aclame:pro 232 SDVLTIGTTIND--YQLAASTGVSVTAATAILRRSS----VQGTAAV-QGIPAEEQVIFCSRNKS---KVYAMNYVREQD 301 (594) Q Consensus 232 ~~~L~l~t~~~q--~~l~~~~~~~lTP~~~~~~~~s----~~g~~~~-~Pv~~g~~v~F~~~~g~---~v~e~~~~~~~d 301 (594) .+.|++|.+..- |..+|.. ++..+-..+++ ..||+.- .=..+|++++|++..+. .|+.+ + T Consensus 195 ~~~l~lfG~~TiEvw~ntG~a----d~~~fpy~r~~g~~i~~Gcaa~~sv~~~~~s~~~l~~~~~g~~~V~~~------~ 264 (472) T protein:vir:92 195 RDFIVCFGSSTIEYFSLTGAT----TVGAALYVAQPSLMVQKGIAGTYCKTPFADSYAFISHPATGAPSVYII------G 264 (472) T ss_pred ccEEEEEeccceEEEEecCCC----CcCcCceEEcCcceeeecccCcchhhecCceEEEEecCCCcccEEEEc------c Confidence 899988888775 7777753 23334445543 4677532 23459999999998764 23332 3 Q ss_pred ceeecchhh-hhhhhhcccccccCCceEEEEEeCCCCeEEEEEcCCCeEEEEEEecccc--eEeEEEeecCCC--eEEEE Q lcl|Aclame:pro 302 NWIPDEMSS-QAQHLFTPISSAKGASVRRVAYISDAAKSLWVVLENGQINYCCFDRTTD--TKAWTQLELSGG--KVIDI 376 (594) Q Consensus 302 ~~~~~dls~-~a~hl~~~~~~~~~~~i~~~a~~~~p~~~~~~~~~dg~~~~~ty~~eq~--v~aW~~w~~~~g--~v~~v 376 (594) +|+++-||- -++..++......-..-...+++.+-+.+..+...|- .+.|+-.-. -.-||.-+.... .-+.+ T Consensus 265 g~qa~rIST~aIE~~i~~y~~~e~~~a~~~s~~~eGH~fy~LtfP~~---Tw~yD~at~~~~e~W~~~~sg~~~~~~R~~ 341 (472) T protein:vir:92 265 SGQASPIATASIEKIIRSYTADELATGVMEALRFDSHELLIIHLPRH---VLVYDASSSQNGPQWCVLKTGLYDDVYRAI 341 (472) T ss_pred CceeEEecCHHHHHHHHhcCcchhceeeEEEEEecCeeEEEEEcCCc---eEEEEcccCcCCceeeeecCCCcccceeEE Confidence 567777754 3444444322111223345567777777777777752 344552211 113776543111 23444 Q ss_pred EEEccCCCCEEEEEEEECCCCCcceeEEEEEeccCcccccceeeeeeEEccCcccccccCCcccCceeEEEEeCCeeccC Q lcl|Aclame:pro 377 AAAFNPDSDYAYVAVVRSKAINGVQKNYTVLEKISSPRTDWKRADGWVVAQVNQNGDVLNLDRYIGRTAVIFSKYGLEAE 456 (594) Q Consensus 377 ~~~~~~~~d~~y~~v~r~~~~~g~~~~~~~le~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~g~tv~i~adg~~~~~ 456 (594) +++.... -+++ = +--||.... | .++...+.+.. ..|+ . ..+ T Consensus 342 ~~~~~~g---~~iv-G--D~~nG~ly~---l-~~~~~t~~~~~-----------------~~~~---~---------~~P 382 (472) T protein:vir:92 342 DFMYEGN---QITC-G--DKSEAVTGQ---L-QFDISSQYDKQ-----------------QEHL---L---------FTP 382 (472) T ss_pred EEEeeCC---eEEE-E--EcCCCeEEE---E-eccccccCCCc-----------------ceEE---E---------Eec Confidence 4443211 1111 1 112332211 1 11111110000 0000 0 011 Q ss_pred eEecCCceEEEEecCCCCCeEEEeEeeeeEEEecceeeeCCCCccceeeEEEEEEEEEEEcccceEEeeeeccccccccc Q lcl|Aclame:pro 457 VEVNNIGLTHRINGYDPNTVYYVGYKMDSYFRTLTPSNGDMKKSMFGSKIRISKVQLALFDSIEPTVNGEPADDRSTDDI 536 (594) Q Consensus 457 ~~v~~~~~tl~~~~~~~~~~v~VG~~y~~~v~~~~~~~~~~~g~~~~~~~ri~~v~v~l~~S~g~~v~~~~~~~~~~~~~ 536 (594) .....+ ..+ +..+++. ..|..+.. .++.|+..+. |..++.+..... T Consensus 383 ~~~~dn------------~R~-----~d~eve~-------~~Gv~q~~----d~v~L~wSdd-G~~~~~~~~~~~----- 428 (472) T protein:vir:92 383 IFKADN------------ARC-----FDLEVES-------STGVAQYA----DRLFLSATTD-GINYGREQMIEQ----- 428 (472) T ss_pred eEecCC------------CEE-----EEEeeec-------cCCCCCcC----ceEEEEeecc-ccccccceeecc----- Confidence 111111 111 1122222 23333333 2566766654 444443321110 Q ss_pred cccccccCCCccccccCcEEEEeecCCcCcc-eEEEEEECCCcCEEEEEEEEEEE Q lcl|Aclame:pro 537 MDARLLDFSSNSGSSNGTRLVDYNPLGWEND-GKMVIAVEQPFLCEVVGVFSVVQ 590 (594) Q Consensus 537 ~~~~~~~~~~~~~~~tg~~~v~~~~~g~~~~-~~v~I~~~~P~P~tIlai~~~v~ 590 (594) .+++. =+.+......|..++ ..++|+-..|.|.+|.++..+++ T Consensus 429 --g~~g~---------~~tr~~~~RlG~~r~~v~f~~r~~~~~~~~l~g~~~~~E 472 (472) T protein:vir:92 429 --NEPFV---------YDKRVLWKRVGRIRRLIGFKLRVITKSPVTLSGCQIRLE 472 (472) T ss_pred --CCccc---------hhcceeeeeeeecccceeEEEEEEecCcceeeeeEEeeC Confidence 00110 011222333444433 33666666677777777777766 No 39 >protein:vir:100960 Length: 472 # NCBI annotation: gp10 # Family: family:all:1540 # MgeID: mge:1509 # MgeName: ST104 # Cross-refs: genbank:acc:YP_006412;genbank:gi:46358704;genbank:GeneID:2777110 Probab=75.78 E-value=0.14 Score=25.22 Aligned_cols=438 Identities=11% Similarity=0.016 Sum_probs=179.1 Q ss_pred CCcc--------cccccccceecchhcccchHHHHHHHHHhhcCcEEe------ecCCceecCcceeeeeeeCCCCCEEE Q lcl|Aclame:pro 1 MADF--------SQTSFKGGVIAPRLQFNEYESAYHHSIEDAVNFVVT------EQGSLITRCGSEEVGLCQDGEVRLFR 66 (594) Q Consensus 1 m~~~--------~~~~f~~Ge~sp~l~~r~d~~~y~~~~~~~~N~~~~------~~G~~~~rpg~~~~~~~~~~~~~~rl 66 (594) |+.. .|+-+.++=+ ...+-|+.+. -.|+++-=||+.+.+.++ ++.|= T Consensus 1 m~~~~ipl~~g~~~~~~~a~~~----------------~~~pvn~y~~~~~~~~ss~~Lr~~pG~~~~a~~~---G~~RG 61 (472) T protein:vir:10 1 MPIQQLPMMKGMGKDFKNADYI----------------DYLPINMLATPKEVLNSSGYLRSFPGIAKRNDVN---GVSRG 61 (472) T ss_pred CceeecccccccccCCCcCcce----------------eeeeeccccccccccccccceeecccceeecCCC---Ccccc Confidence 5532 2222332221 1225555554 356677778988887653 44444 Q ss_pred EEEEeCCCceEEEEEeCCeEEEEeCCceEEecccccccccceeecccchhhhccceeEecCcEEEEecCCccceeEEeec Q lcl|Aclame:pro 67 LPAVDAPSNDVIVEVGNTNIAVWVNDVRQVVANTPSEWRNTIDRIQTAYDTIGDDAGAANTGRLIMVHPALQPKRLYRDN 146 (594) Q Consensus 67 ipF~~s~~q~y~le~g~~~~r~~~~~~~~~~~~~~~~~~~~~~~tpyta~~l~~i~~aq~adv~~~v~~~~~p~~L~R~~ 146 (594) +=|---...-|+..-+..| ++-+ +.+..+. ...+..+.+...+-++..+.. ..++.+ T Consensus 62 ~~~~~~~~~ly~V~G~~Ly-~v~~-----~iG~i~g---------------sgrVsMa~n~~~~~v~~~~~~--~~Y~~~ 118 (472) T protein:vir:10 62 VEYNTAQNAVYRVCGGKLY-KGEA-----VVGDVAG---------------SGRVSMAHGRTSQAVGVNGQL--IEYRYD 118 (472) T ss_pred eeeeeeCCeEEEEeCcceE-EEEe-----eEeeccC---------------cccEEEeeCCeEEEEEECCce--eEEEEe Confidence 4221111112222211111 1100 0000000 001223333322222222211 123333 Q ss_pred cCceeecccccceeeeccccCCcceEEEEEeceEEEEeCCCCCcEEEEEeccccccccccccCCCCccEE-E--EEcCCc Q lcl|Aclame:pro 147 NNAWQFVNMHTGAVPAEWSPSNYPQTVGIFQNRVWYVGSPVHRTYFWATRAGKLEDIAPSTANNPNDPIS-F--VGIMEG 223 (594) Q Consensus 147 ~~~w~~~~~~~~~~p~~~~~~g~Ps~v~f~~~RL~~~~~~~~p~~v~~S~~gd~~nF~~~t~~~d~d~i~-~--~~s~~~ 223 (594) ...+++...... ....-..-+.+..|+|..+|++|.-... +.++.|-..|-+ +.|..+ + +.++.+ T Consensus 119 ~~~~t~~~~~~d-~~f~~~dl~~~~dv~f~dGyfV~~~~gt--~~~~iS~l~d~~---------~~~~y~~fa~AE~~pD 186 (472) T protein:vir:10 119 GAVKTVSNWPAD-SGFTQYELGSVRDITRLRGRYAWSKDGT--DSWFITDLEDES---------HPDRYSAEYRAESQPD 186 (472) T ss_pred cchhhhhcccCc-cccccccccceeEEEEecceEEEccCCC--ceEEEeccCCcc---------ccccccccccccCCCC Confidence 333333221110 0000011233446899999988874221 245555544322 112221 2 345566 Q ss_pred cEEEEEEcCCCEEEEecCcE--EEEecCCCcccCcceeEEEeee----ecccCCc-ccEEeCCeEEEEEcCCC---EEEE Q lcl|Aclame:pro 224 TPCWIIASSDVLTIGTTIND--YQLAASTGVSVTAATAILRRSS----VQGTAAV-QGIPAEEQVIFCSRNKS---KVYA 293 (594) Q Consensus 224 ~~i~~~~~~~~L~l~t~~~q--~~l~~~~~~~lTP~~~~~~~~s----~~g~~~~-~Pv~~g~~v~F~~~~g~---~v~e 293 (594) .++..+...+.|++|.+..- |..+|.. ++..+-..+++ ..||+.- .=..+|++++|++..+. .|+. T Consensus 187 ~Ivgi~~~~~~l~lfG~~TiEvw~ntG~a----d~~~fpy~r~~g~~i~~Gcaa~~sv~~~~~s~~~l~~~~~g~~~V~~ 262 (472) T protein:vir:10 187 GIIGIGSWRDFIVCFGSSTIEYFSLTGAT----TVGAALYVAQPSLMVQKGIAGTYCKTPFADSYAFISHPATGAPSVYI 262 (472) T ss_pred ceEEEEeeccEEEEEeccceEEEEecCCC----CcCcCceEEcCcceeeecccCcchhhecCceEEEEecCCCcccEEEE Confidence 67777888899988888775 7777753 23334445543 4677532 23459999999988764 2333 Q ss_pred EEeeecccceeecchhh-hhhhhhcccccccCCceEEEEEeCCCCeEEEEEcCCCeEEEEEEecccce--EeEEEeecCC Q lcl|Aclame:pro 294 MNYVREQDNWIPDEMSS-QAQHLFTPISSAKGASVRRVAYISDAAKSLWVVLENGQINYCCFDRTTDT--KAWTQLELSG 370 (594) Q Consensus 294 ~~~~~~~d~~~~~dls~-~a~hl~~~~~~~~~~~i~~~a~~~~p~~~~~~~~~dg~~~~~ty~~eq~v--~aW~~w~~~~ 370 (594) + ++|+++-||- -++..++.........-...+|+.+-+.+..+...|. .+.|+-.-.+ .-||.-+. + T Consensus 263 ~------~g~qa~rIST~aIE~~i~~y~~~e~~~A~~~t~~~~GH~fy~LtfP~~---Tw~yD~at~~w~erw~~~~~-g 332 (472) T protein:vir:10 263 I------GSGQASPIATASIEKIIRSYTAEELATGVMETLRFDSHELLIIHLPRH---VLVYDASSSQNGPQWCVLKT-G 332 (472) T ss_pred c------cCceeEEecCHHHHHHHHhcCCccccceEEEEEEeCCeEEEEEEcCCe---eEEEEcccCcccceeeeecC-C Confidence 2 3567777753 3444444322111223344566677777666666664 3344422111 11443222 2 Q ss_pred C---eEEEEEEEccCCCCEEEEEEEECCCCCcceeEEEEEeccCcccccceeeeeeEEccCcccccccCCcccCceeEEE Q lcl|Aclame:pro 371 G---KVIDIAAAFNPDSDYAYVAVVRSKAINGVQKNYTVLEKISSPRTDWKRADGWVVAQVNQNGDVLNLDRYIGRTAVI 447 (594) Q Consensus 371 g---~v~~v~~~~~~~~d~~y~~v~r~~~~~g~~~~~~~le~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~g~tv~i 447 (594) + .-+.++++.... -.++ = +--||... .++..... .+.. ..+...+. T Consensus 333 ~~~~~~R~~~~~~~~g---~~iv-G--D~~nG~ly------~ld~~~~t------------~~g~------~~~~~~~~- 381 (472) T protein:vir:10 333 LYDDVYRAVDFMYEGN---QITC-G--DKSEALTG------QLQFDISS------------QYGL------QQEHLLFT- 381 (472) T ss_pred CcccceeEEEEEeeCC---eEEE-E--EcCCCeEE------EEecccCC------------CCCC------cccceEEc- Confidence 1 133444432211 1111 1 11222211 11110000 0000 00011000 Q ss_pred EeCCeeccCeEecCCceEEEEecCCCCCeEEEeEeeeeEEEecceeeeCCCCccceeeEEEEEEEEEEEcccceEEeeee Q lcl|Aclame:pro 448 FSKYGLEAEVEVNNIGLTHRINGYDPNTVYYVGYKMDSYFRTLTPSNGDMKKSMFGSKIRISKVQLALFDSIEPTVNGEP 527 (594) Q Consensus 448 ~adg~~~~~~~v~~~~~tl~~~~~~~~~~v~VG~~y~~~v~~~~~~~~~~~g~~~~~~~ri~~v~v~l~~S~g~~v~~~~ 527 (594) +.... ++..+ +..+++.. .|..+.. .++.|+..+. |..++.+. T Consensus 382 --------p~l~~------------dn~R~-----~d~eve~~-------~Gv~~~~----d~v~L~wSdd-G~~~~~~~ 424 (472) T protein:vir:10 382 --------PLFKA------------DNARC-----FDLEVESS-------TGVAQYA----DRLFLSATTD-GINYGREQ 424 (472) T ss_pred --------ccccC------------CCCEE-----EEEeeecc-------CCCCCcC----cEEEEEeecc-ccccccce Confidence 00000 11111 11222221 2222322 2566666654 44444332 Q ss_pred ccccccccccccccccCCCccccccCcEEEEeecCCcCcc-eEEEEEECCCcCEEEEEEEEEEE Q lcl|Aclame:pro 528 ADDRSTDDIMDARLLDFSSNSGSSNGTRLVDYNPLGWEND-GKMVIAVEQPFLCEVVGVFSVVQ 590 (594) Q Consensus 528 ~~~~~~~~~~~~~~~~~~~~~~~~tg~~~v~~~~~g~~~~-~~v~I~~~~P~P~tIlai~~~v~ 590 (594) .... .+++. =+.+......|..++ ..++|+-..|.|.+|.++..+++ T Consensus 425 ~~~~-------g~~g~---------~~tr~~~~RlG~~r~~v~f~~r~~~~~~~~l~g~~~~~E 472 (472) T protein:vir:10 425 MIEQ-------NEPFV---------YDKRVIWKRVGRIRRLIGFKLRVITKSPVTLSGCQIRLE 472 (472) T ss_pred eecc-------CCccc---------hhcceeeeeeeecccceeEEEEEEecCcceeeeeEEeeC Confidence 1110 00110 011222334444433 33666666677777777777766 No 40 >protein:vir:3529 Length: 477 # NCBI annotation: P28 # Family: family:all:1540 # MgeID: mge:72 # MgeName: APSE-1 # Cross-refs: genbank:acc:NP_050989;genbank:gi:9633575;genbank:GeneID:1262322 Probab=61.37 E-value=0.35 Score=23.05 Aligned_cols=446 Identities=14% Similarity=0.051 Sum_probs=182.7 Q ss_pred CCcccccccccceecchhcccchHHHHHHHHHhhcCcEEee------cCCceecCcceeeeeeeCCCCCEEEEEEEeCCC Q lcl|Aclame:pro 1 MADFSQTSFKGGVIAPRLQFNEYESAYHHSIEDAVNFVVTE------QGSLITRCGSEEVGLCQDGEVRLFRLPAVDAPS 74 (594) Q Consensus 1 m~~~~~~~f~~Ge~sp~l~~r~d~~~y~~~~~~~~N~~~~~------~G~~~~rpg~~~~~~~~~~~~~~rlipF~~s~~ 74 (594) |+. .|--+..|-.. .| ..+.|. .+.+-|+.+.| +|.+.-=||..-.+. ..++.|=+=|.-... T Consensus 7 m~~-~~ipl~~g~~~----~~-~~~d~~--~~~PVN~~a~p~~~~~s~~~L~~~pG~~~~~~---~~G~~RG~~~~~~~g 75 (477) T protein:vir:35 7 MPK-IQIPLAKGLVK----DI-KTADYI--DALPVNMLATPKEVLNASGYLRSFPGIEKKQD---AKGVSRGVHFNTKNN 75 (477) T ss_pred eee-ecccccccccc----cc-ccccce--eeeeeccceeeccccccccccccCCcceeecc---CCccccceeEeecCC Confidence 332 12222222111 11 111122 22256777654 455556688765443 356667665554444 Q ss_pred ceEEEEEeCCeEEEEeCCceEEecccccccccceeecccchhhhccceeEecCcEEEEecCCccceeEEeeccCceeecc Q lcl|Aclame:pro 75 NDVIVEVGNTNIAVWVNDVRQVVANTPSEWRNTIDRIQTAYDTIGDDAGAANTGRLIMVHPALQPKRLYRDNNNAWQFVN 154 (594) Q Consensus 75 q~y~le~g~~~~r~~~~~~~~~~~~~~~~~~~~~~~tpyta~~l~~i~~aq~adv~~~v~~~~~p~~L~R~~~~~w~~~~ 154 (594) .=|+..-+..|- + ...+ ++ .+ -...+..+.++..+-++..+. ..+++...+...+.. T Consensus 76 ~lY~V~G~~LY~-v---~~~v--G~-----------I~----gsg~VsMa~n~~~~aIv~~g~--~~gy~y~~t~~~~~~ 132 (477) T protein:vir:35 76 ALYRVCGNTLYR-N---DKEV--AD-----------IA----GMSRVSMSHSSHSQAICFEGK--VKLYRYDGTEKALSN 132 (477) T ss_pred eEEEEecCeeEe-e---eeee--ee-----------ec----ccccEEEeeCCcEEEEEECCc--ceeEEEecccceeee Confidence 455444332221 1 1000 00 01 011134444444432332222 234555555555555 Q ss_pred cccceeeeccccCCcceEEEEEeceEEEEeCCCCCcEEEEEeccccccccccccCCCCccEE-E--EEcCCccEEEEEEc Q lcl|Aclame:pro 155 MHTGAVPAEWSPSNYPQTVGIFQNRVWYVGSPVHRTYFWATRAGKLEDIAPSTANNPNDPIS-F--VGIMEGTPCWIIAS 231 (594) Q Consensus 155 ~~~~~~p~~~~~~g~Ps~v~f~~~RL~~~~~~~~p~~v~~S~~gd~~nF~~~t~~~d~d~i~-~--~~s~~~~~i~~~~~ 231 (594) .+....|.+ .-+-...|+|..+|++|.-... +.++.|..-|- .-.|+++ + +.++.+.++..+.. T Consensus 133 ~~~~~~p~~--~l~~~~~v~f~dGyfV~~~~gt--~~~~iS~L~d~---------s~~d~~~~FasAE~~pD~Ivgi~~~ 199 (477) T protein:vir:35 133 WPKDKYPQY--DLGEVIDVCRNRGRYIWLQKGG--ERFGVTDLEDE---------SKPDRYQPFYRAESQPDGIVSVDAW 199 (477) T ss_pred cCccccCCc--cccceeEEEeeCceEEEeecCC--CeEEEeecCCc---------cccccccccccccCCCCceEEEEee Confidence 433222211 1122346789999987764432 23454532221 1234444 3 33555667778888 Q ss_pred CCCEEEEecCcE--EEEecCCCcccCcceeEEEeeeecccCCcc-cEEeCCeEEEEEcCCC---EEEEEEeeecccceee Q lcl|Aclame:pro 232 SDVLTIGTTIND--YQLAASTGVSVTAATAILRRSSVQGTAAVQ-GIPAEEQVIFCSRNKS---KVYAMNYVREQDNWIP 305 (594) Q Consensus 232 ~~~L~l~t~~~q--~~l~~~~~~~lTP~~~~~~~~s~~g~~~~~-Pv~~g~~v~F~~~~g~---~v~e~~~~~~~d~~~~ 305 (594) .+.|++|.+..- |..+|..+-....-...-...-..||+.-. =..+|++++|++.... .|+.+ ++|++ T Consensus 200 ~~~i~lfG~~TiEvw~ntG~a~f~~p~~r~~~~~mIq~Gcaa~~sv~~~~~t~~~l~~d~~g~~~V~~~------~g~q~ 273 (477) T protein:vir:35 200 RDLIVCFGSSSIEYFTLTGSADTSQPLYIHQAAYMIQAGIAGRDCKCRYQDKYAILSHQSTGQPAVYLI------GAGEK 273 (477) T ss_pred ccEEEEEeccceEEEEecCCCCCCcceeecCCceeeeecccCchhhhhhCceEEEEecCCCcccEEEEc------cCcee Confidence 999998888775 778776532101111111111246775322 2458999999987542 23333 35677 Q ss_pred cchhh-hhhhhhcccccccCCceEEEEEeCCCCeEEEEEcCCCeEEEEEEecccceEeEE-EeecC--C---CeEEEEEE Q lcl|Aclame:pro 306 DEMSS-QAQHLFTPISSAKGASVRRVAYISDAAKSLWVVLENGQINYCCFDRTTDTKAWT-QLELS--G---GKVIDIAA 378 (594) Q Consensus 306 ~dls~-~a~hl~~~~~~~~~~~i~~~a~~~~p~~~~~~~~~dg~~~~~ty~~eq~v~aW~-~w~~~--~---g~v~~v~~ 378 (594) +-||- -++..++..+......-...+|+.+-+.+.++...|- .+.|+-.-+ -|| +|... + ...+..+. T Consensus 274 ~rIST~aIE~~i~ay~~~e~a~af~~t~~~eGH~fy~LtfP~~---Tw~yD~at~--~w~e~W~~~~~g~~~~~~Ra~~~ 348 (477) T protein:vir:35 274 NKISTATIDKIIRYYSADELAASFMESIRFDNHELLLLHLPKH---TLCFDGSAS--HQYSQWSLLKSGFYDEPYRAIDF 348 (477) T ss_pred EEecCHHHHHHHHhcCCcchhceeEEEEEeCCeeEEEEEcCCc---eEEEecccc--cccceeeeeccCCccCceEEEEE Confidence 77743 3445554333222222233455555565555555542 223442211 233 33221 1 12222222 Q ss_pred EccCCCCEEEEEEEECCCCCcceeEEEEEeccCcccccceeeeeeEEccCcccccccCCcccCceeEEEEeCCeeccCeE Q lcl|Aclame:pro 379 AFNPDSDYAYVAVVRSKAINGVQKNYTVLEKISSPRTDWKRADGWVVAQVNQNGDVLNLDRYIGRTAVIFSKYGLEAEVE 458 (594) Q Consensus 379 ~~~~~~d~~y~~v~r~~~~~g~~~~~~~le~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~g~tv~i~adg~~~~~~~ 458 (594) +...+ -+++ = +.-||.. -.++..... -.|+ ...... T Consensus 349 ~~~~g---~~~v-G--D~~ng~l------~~ld~~~~~-----------------------d~g~---------~i~~~~ 384 (477) T protein:vir:35 349 MFFDN---QITV-G--DKKEGVL------GHLIFNASN-----------------------QYEQ---------QTEHLL 384 (477) T ss_pred EEeCC---eEEE-E--EcCCCeE------EEECCCCcc-----------------------cCCC---------ccceEE Confidence 22111 1111 1 1112211 111110000 0010 000000 Q ss_pred ecCCceEEEEecCCCCCeEEEeEeeeeEEEecceeeeCCCCccceeeEEEEEEEEEEEcccceEEeeeeccccccccccc Q lcl|Aclame:pro 459 VNNIGLTHRINGYDPNTVYYVGYKMDSYFRTLTPSNGDMKKSMFGSKIRISKVQLALFDSIEPTVNGEPADDRSTDDIMD 538 (594) Q Consensus 459 v~~~~~tl~~~~~~~~~~v~VG~~y~~~v~~~~~~~~~~~g~~~~~~~ri~~v~v~l~~S~g~~v~~~~~~~~~~~~~~~ 538 (594) +. . .+.. +...+. ..++ ++..+-| +.. .++.|+..+. |..++.+..... T Consensus 385 ~~-p--~~~~----d~~Rv~-----~~el-----~~~tGvg--q~~----d~v~L~~sdd-G~~~~~~~~~~~------- 433 (477) T protein:vir:35 385 YT-P--MIKA----DNARLF-----DFEL-----EASTGVA--QIA----DKLFLSVTTD-GINYSREQLIEQ------- 433 (477) T ss_pred ec-c--eeeC----CCCeEE-----EEEE-----EEecCcC--ccC----ceEEEEEecc-ccccccceeecC------- Confidence 00 0 0000 011111 1111 1111111 211 1255555543 444433211100 Q ss_pred cccccCCCccccccCcEEEEeecCCcCcc---eEEEEEECCCcCEEEEEEEEE Q lcl|Aclame:pro 539 ARLLDFSSNSGSSNGTRLVDYNPLGWEND---GKMVIAVEQPFLCEVVGVFSV 588 (594) Q Consensus 539 ~~~~~~~~~~~~~tg~~~v~~~~~g~~~~---~~v~I~~~~P~P~tIlai~~~ 588 (594) ..++. =+.+......|..++ .++++....|.|++++++-+| T Consensus 434 g~~g~---------~~~r~~~~RlG~~r~~vgf~~r~~~~~pv~l~~~~~~~e 477 (477) T protein:vir:35 434 NSPFQ---------YDKRILWRRIGRVRKNIGFKIRIITKSPVTLSDLSIRME 477 (477) T ss_pred CCccc---------cccceeeeeeeeceeccceEEEEEecCCceeccceeEeC Confidence 00000 011222333444443 678888888999999998888 No 41 >protein:vir:78703 Length: 905 # NCBI annotation: tail tube B # Family: family:all:825 # MgeID: mge:1856 # MgeName: Syn5 # Cross-refs: genbank:acc:YP_001285450;genbank:gi:148724484;genbank:GeneID:5220174 Probab=60.71 E-value=0.37 Score=22.97 Aligned_cols=530 Identities=9% Similarity=0.018 Sum_probs=161.0 Q ss_pred CCccc--ccccccceecchhcccchHHHHHHHHHhhcCcEEeecCCceecCcceeeeeeeCCC-CCEEEEEEEeCCCceE Q lcl|Aclame:pro 1 MADFS--QTSFKGGVIAPRLQFNEYESAYHHSIEDAVNFVVTEQGSLITRCGSEEVGLCQDGE-VRLFRLPAVDAPSNDV 77 (594) Q Consensus 1 m~~~~--~~~f~~Ge~sp~l~~r~d~~~y~~~~~~~~N~~~~~~G~~~~rpg~~~~~~~~~~~-~~~rlipF~~s~~q~y 77 (594) |+-+. -+||-+|.- --.|..|+..=++.+.||++-|..|++||||+.|++.+.++. ...+...+.-.+...| T Consensus 1 M~~v~~si~nl~~GvS-----qQp~~~r~pgQ~~~q~N~~~d~v~Gl~kRp~~~~i~~l~~~~~~~~~~~~~~r~~~e~y 75 (905) T protein:vir:78 1 MGAVLQKIPNLLGGVS-----QQPDPVKLPGQVREAENVYLDPTFGCRKRPATKFVGELATNLPSDTRWFPIFRDAGERY 75 (905) T ss_pred CccceecchhhhCcee-----ecchhhcCCcchhhhhccccccccccccCchhhhhhhhcCCCCCCceEEEEEeCCCceE Confidence 99884 568888742 356888899999999999999999999999999999888753 3334444444455567 Q ss_pred EEEEeCC-----eEEEEeC-CceEEecccccccccceeecccchhhhccceeEecCcEEEEecCCccceeEEeeccCcee Q lcl|Aclame:pro 78 IVEVGNT-----NIAVWVN-DVRQVVANTPSEWRNTIDRIQTAYDTIGDDAGAANTGRLIMVHPALQPKRLYRDNNNAWQ 151 (594) Q Consensus 78 ~le~g~~-----~~r~~~~-~~~~~~~~~~~~~~~~~~~tpyta~~l~~i~~aq~adv~~~v~~~~~p~~L~R~~~~~w~ 151 (594) ...++.. .+|+|.. .|....-........ ..++....+|+.+-.+|..|++++.+.|.. ....... T Consensus 76 ~~~~~~~g~~~~~i~v~d~~~G~~~~V~~~~~~~~-----yl~~~~~~~l~~~tv~d~tfi~N~~~~~~~---~~~~~~~ 147 (905) T protein:vir:78 76 AVALYKDGSGNTQVRVWDMQTGAERTVTPDATATA-----YLATTNLNNLNWLTVADYTLLSNKERIVTM---SGASEVD 147 (905) T ss_pred EEEEeeCCCCCcceEEEEccCCcEEEEecCCCccc-----eeecCCCcceEEEEEcCEEEEEcCceeeee---cCCCCcC Confidence 7776543 4999976 343222211111222 223445667899999999999999887742 1111111 Q ss_pred ecccccceeeeccccCCcceEEEEEeceEEEE--eCCCCCcEEEE-----EeccccccccccccCCCCccEEEEEcCCcc Q lcl|Aclame:pro 152 FVNMHTGAVPAEWSPSNYPQTVGIFQNRVWYV--GSPVHRTYFWA-----TRAGKLEDIAPSTANNPNDPISFVGIMEGT 224 (594) Q Consensus 152 ~~~~~~~~~p~~~~~~g~Ps~v~f~~~RL~~~--~~~~~p~~v~~-----S~~gd~~nF~~~t~~~d~d~i~~~~s~~~~ 224 (594) .. ..++ +++ +.-.++..|-. +....+ .............++..+.... T Consensus 148 ~~------------~~~~-----------~~v~~g~y~r~y~v~I~~~~~~~~~t~--~~~~a~~~s~~s~~~~~~g~~~ 202 (905) T protein:vir:78 148 SN------------QRAL-----------VEINAISYNTTYSIDLDRDGASQQVKV--YRAKALEISPGSFEVEDGGVCT 202 (905) T ss_pred CC------------CeEE-----------EEEEeeccceeEEEEEeCCCCceeeee--eccccceecccccccccccccc Confidence 00 0111 111 00000011111 000001 0111000000001111111111 Q ss_pred EEEEEEcCCCEEEEe-cCcEEEEecCC------CcccCcceeEEEeeeecccCCcccEEeCCeEEEEEcCCCE--E---- Q lcl|Aclame:pro 225 PCWIIASSDVLTIGT-TINDYQLAAST------GVSVTAATAILRRSSVQGTAAVQGIPAEEQVIFCSRNKSK--V---- 291 (594) Q Consensus 225 ~i~~~~~~~~L~l~t-~~~q~~l~~~~------~~~lTP~~~~~~~~s~~g~~~~~Pv~~g~~v~F~~~~g~~--v---- 291 (594) ....... .++-+.+ .+..|.+.-+. ++--++.|..+.... |...- ..|+.+.+.+ .|.. | T Consensus 203 ~~~~~~~-~~~t~~~~~~l~f~~~~~~~~~~~~~~~~~~~~~~~~l~~--g~~~~---~~~~~~~v~~-~g~~y~i~i~~ 275 (905) T protein:vir:78 203 EHDVQNY-TNQTIGSSTGLAFQVRVQCAAYLENNEYRSRYNVSVVLQN--GGTGF---RKGDMITVNL-NGRDYNIRVTQ 275 (905) T ss_pred ccceeee-ecceeeccCCceeEEeeccccccCCCcccccccceeeeec--ccccc---ccCccEEEee-ccceEEEEEec Confidence 0111111 1222222 22333333221 111122222222221 11100 1133333222 2221 1 Q ss_pred EEEEeee---cc--c----cee--ecchhhhhhhhhcccccccCCceEEEEEeCCCCeEEEEEcCCCeEEEEEEe-c--- Q lcl|Aclame:pro 292 YAMNYVR---EQ--D----NWI--PDEMSSQAQHLFTPISSAKGASVRRVAYISDAAKSLWVVLENGQINYCCFD-R--- 356 (594) Q Consensus 292 ~e~~~~~---~~--d----~~~--~~dls~~a~hl~~~~~~~~~~~i~~~a~~~~p~~~~~~~~~dg~~~~~ty~-~--- 356 (594) ++-.+.+ .. + ... ...++.++..|...+.. +-.+.+..... .+++...++.-+.++-. . T Consensus 276 ~~~~~~~~~~~~~~~~t~~d~~a~~~~~~~i~~~l~~~~~~-----~~~~~~~~~g~-~i~v~~~~~~~~~~~~~~g~~~ 349 (905) T protein:vir:78 276 EEFVYTYASDGTAAHTTPQDSTAGTLDIGQITAGLVNSVNL-----ISNYSAQAVGN-VIEIERTDGRDFNLGVRGGATN 349 (905) T ss_pred ceeEEEecCCCcccccCccCccCccccHHHHHHHHHHhhcc-----cccEEEEecCc-EEEEEecCCCccEEEEeccCCc Confidence 1111110 00 0 011 11223344444433211 11122222222 23333333221111100 0 Q ss_pred ------ccceEeEEEee--cCCCeEEEEEEEccCCCCEEEEEEEEC-CCCCcceeEEEEEeccCc--------------- Q lcl|Aclame:pro 357 ------TTDTKAWTQLE--LSGGKVIDIAAAFNPDSDYAYVAVVRS-KAINGVQKNYTVLEKISS--------------- 412 (594) Q Consensus 357 ------eq~v~aW~~w~--~~~g~v~~v~~~~~~~~d~~y~~v~r~-~~~~g~~~~~~~le~~~~--------------- 412 (594) -..|+.-++.. .++|....++--.....|.-|+...-. ....+ ...+ .|.... T Consensus 350 ~~~~~~~~~v~~~~~Lp~~~~~g~~v~v~~~~~~~~d~yyv~~~~~~~~~~~-~~~W--~E~~~~~~~~~~~~~tmp~~l 426 (905) T protein:vir:78 350 RAMTAIKGTANSIVDLPGQCFDGFELKVINTENAESDDYYVVFRSAAEGIPG-SGSW--EETVAPGIERGFNTSTMPHAL 426 (905) T ss_pred ceEEEEeccccccccCccccCCCcEEEEEeCCCCCcceEEEEEEecccCCcC-ceeE--EEecccccccccccccccEEE Confidence 00111111111 112322222222222334444322211 11111 1111 111110 Q ss_pred -----ccccceeeee------eEE--ccCcccc--------cccCCcccCce-------eEEEEeCCee--ccCeE---- Q lcl|Aclame:pro 413 -----PRTDWKRADG------WVV--AQVNQNG--------DVLNLDRYIGR-------TAVIFSKYGL--EAEVE---- 458 (594) Q Consensus 413 -----~~~~~~~~~~------~~~--~~~~~~~--------~~~~l~~l~g~-------tv~i~adg~~--~~~~~---- 458 (594) ..+.-...+. +.. ++....+ .+++.-.+.++ ++..-.-|.+ +.... T Consensus 427 ~r~~~g~f~~~~~~~~~~~~~~~~r~~Gd~~Tnp~psf~g~~is~v~f~q~RL~f~s~~~v~~Srtgd~~nF~~~t~~~~ 506 (905) T protein:vir:78 427 IRQADGNFTLEALNDEGTITGWAQREVGDDDTNPKPSFVGRGISDMFFYNNRLGFLSEDAVIMSQPGDYFNFFVTSAITI 506 (905) T ss_pred EEecCceEEEEEeccccccccccccccCCcccCCCCcccCCCcceEEEEcceEEEecCCeEEEEccCCccccccccccCC Confidence 0000000000 000 0000000 00111111111 1111111111 00000 Q ss_pred ecCCceEEEEecCCCCCeEEEeEeeeeEEEe-cc---eeeeCCCCccce-eeEEEEEEE-EEEEcccc-eEEeeeec-cc Q lcl|Aclame:pro 459 VNNIGLTHRINGYDPNTVYYVGYKMDSYFRT-LT---PSNGDMKKSMFG-SKIRISKVQ-LALFDSIE-PTVNGEPA-DD 530 (594) Q Consensus 459 v~~~~~tl~~~~~~~~~~v~VG~~y~~~v~~-~~---~~~~~~~g~~~~-~~~ri~~v~-v~l~~S~g-~~v~~~~~-~~ 530 (594) .+++.+.+.+..+..+ .+.=-.++.-.+-. +. ..+. .++..+. ...+|.+.. ..+..... +.++.... .. T Consensus 507 ~DdDpI~~~~ss~~~~-~i~~~v~~~~~L~ifT~g~ef~ls-g~~~~lTP~s~~i~~~S~~~~~~~v~Pv~vG~~vlFv~ 584 (905) T protein:vir:78 507 SDSDPIDVTASSTKPA-ILRAAIGAPKGLILFAENSQFLLA-SQEVVFSTATIKLTEISDYFYRSLAKPVSTGVSIAFVS 584 (905) T ss_pred CCCccEEEEEcCCcce-eeEEEeecCCcEEEEecCceEEEe-cCCccccceeEEEEeEEeecccCCCCcEEeCCeEEEee Confidence 1233333333222211 11111122111111 00 0111 1121111 122222221 11111111 11111100 00 Q ss_pred ccccc--ccccccccCCCccccccCcEEEEeecCCcCcceEEEEEECCCcCEEEEEEEEEEEeccC Q lcl|Aclame:pro 531 RSTDD--IMDARLLDFSSNSGSSNGTRLVDYNPLGWENDGKMVIAVEQPFLCEVVGVFSVVQSNKV 594 (594) Q Consensus 531 ~~~~~--~~~~~~~~~~~~~~~~tg~~~v~~~~~g~~~~~~v~I~~~~P~P~tIlai~~~v~~n~~ 594 (594) +.+.. +........... ....+...-.+ ..-......+.+..|..+ + .....-|++ T Consensus 585 ~~g~~s~vre~~y~~~~d~--y~a~DlT~~a~--hl~~g~v~~~~~s~~~~~--v--~~~~~~~~l 642 (905) T protein:vir:78 585 EADTYSKIFEMSIDSVDNR--PQVADITRIVP--EYVPTGLTWSVSTPNNSM--M--LFGDNSNTA 642 (905) T ss_pred cCCCeeEEEEEEeeecccc--eehhHHHHHHH--HhcCCceEEEEecCCCcE--E--EEEcCCCeE Confidence 00000 000000000000 00000000000 000111122223333321 1 111222333 Done!