Query lcl|Aclame:protein:vir:94763|NCBI_annot:unknown|genbank:acc:NP_996710;genbank:gi:45597425;genbank:GeneID:2769032 Match_columns 78 No_of_seqs 47 out of 52 Neff 4.5 Searched_HMMs 1612 Date Sat Nov 30 21:32:18 2013 Command /home/guerois/workspace/virfam/python/lib/hhsearch//hhsearch2 -i .//seq/seq_36 -d /home/guerois/workspace/virfam/python/profile_database/capsid_neck_tail.hhm -glob -cpu 7 -o .//seq/HHR/seq_36_vs_rec_db.hhr No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM 1 protein:vir:94763 Length: 78 # 100.0 1.6E-39 9.8E-43 233.3 7.5 78 1-78 1-78 (78) 2 protein:vir:1642 Length: 78 # 100.0 1.6E-39 9.8E-43 233.3 7.5 78 1-78 1-78 (78) 3 protein:vir:9578 Length: 78 # 100.0 3.5E-39 2.2E-42 231.4 7.9 78 1-78 1-78 (78) 4 protein:vir:9763 Length: 89 # 100.0 3.2E-39 2E-42 231.6 7.4 78 1-78 12-89 (89) 5 protein:vir:99924 Length: 87 # 98.4 3.6E-10 2.2E-13 72.4 2.9 76 1-78 1-84 (87) 6 protein:vir:8192 Length: 90 # 98.3 1.1E-10 6.9E-14 75.2 -1.1 77 1-78 1-89 (90) 7 protein:vir:2507 Length: 83 # 98.1 2.5E-09 1.5E-12 67.8 2.4 71 8-78 1-77 (83) 8 protein:vir:80665 Length: 96 # 97.4 1.6E-07 9.8E-11 57.9 1.6 78 1-78 1-93 (96) 9 protein:vir:98468 Length: 90 # 94.5 0.00011 7E-08 42.2 3.6 73 1-78 1-86 (90) 10 protein:vir:78163 Length: 92 # 93.2 0.00017 1.1E-07 41.2 2.2 77 1-78 1-88 (92) 11 protein:vir:5978 Length: 144 # 55.2 0.15 9.3E-05 25.1 4.0 78 1-78 1-140 (144) 12 protein:vir:81251 Length: 94 # 47.1 0.31 0.00019 23.4 4.4 77 1-78 1-90 (94) 13 protein:vir:108236 Length: 135 45.3 0.09 5.6E-05 26.3 1.1 73 1-78 1-75 (135) 14 protein:vir:94654 Length: 142 34.4 1.3 0.0008 20.0 6.2 78 1-78 1-101 (142) No 1 >protein:vir:94763 Length: 78 # NCBI annotation: unknown # Family: family:all:1171 # MgeID: mge:1529 # MgeName: phi LC3 # Cross-refs: genbank:acc:NP_996710;genbank:gi:45597425;genbank:GeneID:2769032 Probab=100.00 E-value=1.6e-39 Score=233.31 Aligned_cols=78 Identities=100% Similarity=1.354 Sum_probs=78.0 Q ss_pred CCcceeEEChHHHHHHhccHHHHHHHHHHHHHHHHhhCCCceecccccCccceEEEeeCCHHHHHHhhhcchhhhhcC Q lcl|Aclame:pro 1 MAKNLFKLNRSGVASMMKSPEMQAILKEKASAVKQRCGPGYGQDMHVGKNRANAMVFAETYQAKRDNMKNNTILKAVR 78 (78) Q Consensus 1 Mskvk~~lN~~G~rell~s~~~q~~l~~~A~~Ia~rAG~gY~~d~~vgk~Ra~a~V~~~t~kA~~dN~k~NTLLKA~~ 78 (78) ||||||+||++||+|||+||+||++|+++|+.|++|||+||++|++|||+|+|++|+|+|++|++||+|||||||||+ T Consensus 1 Ms~~kfklN~aGv~~llks~~iQa~l~~~a~~i~~raG~gy~~dv~vgk~Ra~a~V~~~t~~A~~~N~KhNTLLKAv~ 78 (78) T protein:vir:94 1 MAKNLFKLNRSGVASMMKSPEMQAILKEKASAVKQRCGPGYGQDMHVGKNRANAMVFAETYQAKRDNMKNNTILKAVR 78 (78) T ss_pred CCcceeEeCHHHHHHHhcCchhHHHHHHHHHHHHHhhcCcceeccccCCcccceEeccCChhhHHhhhhcchhhhhcC Confidence 999999999999999999999999999999999999999999999999999999999999999999999999999999 No 2 >protein:vir:1642 Length: 78 # NCBI annotation: hypothetical protein # Family: family:all:1171 # MgeID: mge:33 # MgeName: r1t # Cross-refs: genbank:acc:NP_695063;genbank:gi:23455754;genbank:GeneID:955475 Probab=100.00 E-value=1.6e-39 Score=233.31 Aligned_cols=78 Identities=100% Similarity=1.354 Sum_probs=78.0 Q ss_pred CCcceeEEChHHHHHHhccHHHHHHHHHHHHHHHHhhCCCceecccccCccceEEEeeCCHHHHHHhhhcchhhhhcC Q lcl|Aclame:pro 1 MAKNLFKLNRSGVASMMKSPEMQAILKEKASAVKQRCGPGYGQDMHVGKNRANAMVFAETYQAKRDNMKNNTILKAVR 78 (78) Q Consensus 1 Mskvk~~lN~~G~rell~s~~~q~~l~~~A~~Ia~rAG~gY~~d~~vgk~Ra~a~V~~~t~kA~~dN~k~NTLLKA~~ 78 (78) ||||||+||++||+|||+||+||++|+++|+.|++|||+||++|++|||+|+|++|+|+|++|++||+|||||||||+ T Consensus 1 Ms~~kfklN~aGv~~llks~~iQa~l~~~a~~i~~raG~gy~~dv~vgk~Ra~a~V~~~t~~A~~~N~KhNTLLKAv~ 78 (78) T protein:vir:16 1 MAKNLFKLNRSGVASMMKSPEMQAILKEKASAVKQRCGPGYGQDMHVGKNRANAMVFAETYQAKRDNMKNNTILKAVR 78 (78) T ss_pred CCcceeEeCHHHHHHHhcCchhHHHHHHHHHHHHHhhcCcceeccccCCcccceEeccCChhhHHhhhhcchhhhhcC Confidence 999999999999999999999999999999999999999999999999999999999999999999999999999999 No 3 >protein:vir:9578 Length: 78 # NCBI annotation: gp44 # Family: family:all:1171 # MgeID: mge:171 # MgeName: SM1 # Cross-refs: genbank:acc:NP_862883;genbank:gi:32469475;genbank:GeneID:1461320 Probab=100.00 E-value=3.5e-39 Score=231.39 Aligned_cols=78 Identities=56% Similarity=0.909 Sum_probs=78.0 Q ss_pred CCcceeEEChHHHHHHhccHHHHHHHHHHHHHHHHhhCCCceecccccCccceEEEeeCCHHHHHHhhhcchhhhhcC Q lcl|Aclame:pro 1 MAKNLFKLNRSGVASMMKSPEMQAILKEKASAVKQRCGPGYGQDMHVGKNRANAMVFAETYQAKRDNMKNNTILKAVR 78 (78) Q Consensus 1 Mskvk~~lN~~G~rell~s~~~q~~l~~~A~~Ia~rAG~gY~~d~~vgk~Ra~a~V~~~t~kA~~dN~k~NTLLKA~~ 78 (78) ||||||+||++||+|||+||+||++|+++|++|++|||+||++|+++||+|||++|+|+|++|++||+|||||||||+ T Consensus 1 ms~~k~klN~aGvr~ll~s~~~Qa~l~~~A~~i~~rag~gY~~d~~~gk~Ra~a~V~~~t~~A~~~N~khNTLLKAv~ 78 (78) T protein:vir:95 1 MSNTKIKLIGAGVGALLKSKEIQDILNKEATVIKKRCGPGYEQDSHVGKTRANAMIYPTTRKAKRDNLKNNTLLKAVH 78 (78) T ss_pred CCcceeeeCHHHHHHHhcChhHHHHHHHHHHHHHHhhccccccccccCCcccceEeecCChHHHHhhhhhhhhhhhcC Confidence 999999999999999999999999999999999999999999999999999999999999999999999999999999 No 4 >protein:vir:9763 Length: 89 # NCBI annotation: hypothetical protein # Family: family:all:1171 # MgeID: mge:175 # MgeName: 315.3 # Cross-refs: genbank:acc:NP_795525;genbank:gi:28876279;genbank:GeneID:1257820 Probab=100.00 E-value=3.2e-39 Score=231.65 Aligned_cols=78 Identities=67% Similarity=0.980 Sum_probs=78.0 Q ss_pred CCcceeEEChHHHHHHhccHHHHHHHHHHHHHHHHhhCCCceecccccCccceEEEeeCCHHHHHHhhhcchhhhhcC Q lcl|Aclame:pro 1 MAKNLFKLNRSGVASMMKSPEMQAILKEKASAVKQRCGPGYGQDMHVGKNRANAMVFAETYQAKRDNMKNNTILKAVR 78 (78) Q Consensus 1 Mskvk~~lN~~G~rell~s~~~q~~l~~~A~~Ia~rAG~gY~~d~~vgk~Ra~a~V~~~t~kA~~dN~k~NTLLKA~~ 78 (78) ||||||+||++||+|||+||+||++|+++|++|++|||+||++|++|||+|||++|+|+|++|++||+|||||||||+ T Consensus 12 MskvkfklN~aGvr~llks~~iQa~l~~~A~~I~~rAg~gY~adv~~Gk~Ra~a~V~t~t~~A~~~N~KHNTLLKAv~ 89 (89) T protein:vir:97 12 MSKFKFKLNKAGVAELMKSSEMQQVLTTKATAIRERCGDGYAQDIHVGKNRANAMVSAKTIKAKKDNSKNNTLLKAVR 89 (89) T ss_pred hhcceeeeCHHHHHHHhcChhHHHHHHHHHHHHHHhhccccccccccCCcccceEeccCChHHHHhhhhhhhhhhhcC Confidence 999999999999999999999999999999999999999999999999999999999999999999999999999999 No 5 >protein:vir:99924 Length: 87 # NCBI annotation: gp11 # Family: family:all:1171 # MgeID: mge:1611 # MgeName: Halo # Cross-refs: genbank:acc:YP_655528;genbank:gi:109392298;genbank:GeneID:4157093 Probab=98.38 E-value=3.6e-10 Score=72.38 Aligned_cols=76 Identities=24% Similarity=0.381 Sum_probs=66.5 Q ss_pred CCcceeEEChHHHHHHhccHHHHHHHHHHHHHHHHhhC------CCceecccccCccceEEEeeCCHHHHHHhhhcchhh Q lcl|Aclame:pro 1 MAKNLFKLNRSGVASMMKSPEMQAILKEKASAVKQRCG------PGYGQDMHVGKNRANAMVFAETYQAKRDNMKNNTIL 74 (78) Q Consensus 1 Mskvk~~lN~~G~rell~s~~~q~~l~~~A~~Ia~rAG------~gY~~d~~vgk~Ra~a~V~~~t~kA~~dN~k~NTLL 74 (78) |.|. ++--.-=+.|+++|++|..|+..+-.|+.+|| |||+++..+|++|.++.|||.+.+|+.-+.+--+|| T Consensus 1 ~~~l--~~P~SehrKIR~lpev~kacq~lga~ia~~Ag~iAga~DgYgte~~vGrdR~Rv~V~a~~~aaikaE~~~aPlm 78 (87) T protein:vir:99 1 MGKL--KIPISDDKKIRRSSEVRKACQTIGATIAVTAGRIAGDSDGYGVEETVGSDRTRVNVYAQHNKTMKAEAGATPPL 78 (87) T ss_pred CCcc--cCCcccchhhccchhHHHHHHHhhhHHhhhhccccCCCCCceeeeeecCceeEEEEeecCCceeeeccCCCchh Confidence 7764 44455668999999999999999999999985 899999999999999999999999999998988887 Q ss_pred h--hcC Q lcl|Aclame:pro 75 K--AVR 78 (78) Q Consensus 75 K--A~~ 78 (78) . ||+ T Consensus 79 q~aA~~ 84 (87) T protein:vir:99 79 QQAAMR 84 (87) T ss_pred hhhhhh Confidence 5 555 No 6 >protein:vir:8192 Length: 90 # NCBI annotation: gp12 # Family: family:all:30780 # MgeID: mge:153 # MgeName: Che9d # Cross-refs: genbank:acc:NP_817985;genbank:gi:29566419;genbank:GeneID:2700973 Probab=98.32 E-value=1.1e-10 Score=75.17 Aligned_cols=77 Identities=26% Similarity=0.315 Sum_probs=68.0 Q ss_pred CCcceeEEChHHHHHHhccHHHHHHHHHHHHHHHHhh--------CCCceeccccc----CccceEEEeeCCHHHHHHhh Q lcl|Aclame:pro 1 MAKNLFKLNRSGVASMMKSPEMQAILKEKASAVKQRC--------GPGYGQDMHVG----KNRANAMVFAETYQAKRDNM 68 (78) Q Consensus 1 Mskvk~~lN~~G~rell~s~~~q~~l~~~A~~Ia~rA--------G~gY~~d~~vg----k~Ra~a~V~~~t~kA~~dN~ 68 (78) |+- +++----|...|+...++.+.-+..|.+++.|| |-||+.++.+| +.|++++|++.|..|.++|+ T Consensus 1 mti-rvkhkiggyyklrsaggvvafeeaaakdvaarankqlkgkggigf~~ss~qgarrpqgrwr~~v~a~s~~arr~na 79 (90) T protein:vir:81 1 MTI-RVKHKIGGYYKLRSAGGVVAFEEAAAKDVAARANKQLKGKGGIGFAVSSRQGARRPQGRWRTSVAAVSPYARRHNA 79 (90) T ss_pred Cee-EeeeccCceeeecccCceeeeccchhhhhhhhccccccccccceeeecccccCcCCCcceeeEEEeeccchhhccc Confidence 553 555556799999999999999899999999999 45799999999 45889999999999999999 Q ss_pred hcchhhhhcC Q lcl|Aclame:pro 69 KNNTILKAVR 78 (78) Q Consensus 69 k~NTLLKA~~ 78 (78) |||||++++. T Consensus 80 k~ntlir~ls 89 (90) T protein:vir:81 80 KHNTLIRALS 89 (90) T ss_pred ccceeeEeec Confidence 9999999999 No 7 >protein:vir:2507 Length: 83 # NCBI annotation: hypothetical protein # Family: family:all:1171 # MgeID: mge:53 # MgeName: TM4 # Cross-refs: genbank:acc:NP_569748;genbank:gi:18496898;genbank:GeneID:932258 Probab=98.12 E-value=2.5e-09 Score=67.76 Aligned_cols=71 Identities=32% Similarity=0.534 Sum_probs=61.4 Q ss_pred EChHHHHHHhccHHHHHHHHHHHHHHHHhhC------CCceecccccCccceEEEeeCCHHHHHHhhhcchhhhhcC Q lcl|Aclame:pro 8 LNRSGVASMMKSPEMQAILKEKASAVKQRCG------PGYGQDMHVGKNRANAMVFAETYQAKRDNMKNNTILKAVR 78 (78) Q Consensus 8 lN~~G~rell~s~~~q~~l~~~A~~Ia~rAG------~gY~~d~~vgk~Ra~a~V~~~t~kA~~dN~k~NTLLKA~~ 78 (78) +--.-=+.|+++|++|..|+..+-.|+.+|| |||+++..+|++|.++.|||.+-+|+.-+.+--.||---- T Consensus 1 ~P~SehrKIR~lpev~kacq~lga~ia~~Ag~iA~a~DgYgte~~vGrdR~Rv~V~a~~~aaikaE~~~aPlmq~aA 77 (83) T protein:vir:25 1 MPNSEHRKIRKLPEVQAELQRLAAEVARRAGGIADAPDGYGTDLEVGRTRARAHVWPKSSAAIKAEIKTAPLMTIAA 77 (83) T ss_pred CCCcccchhccchhHHHHHHHhhHHHhhhhccccCCCCCcccceeecCceeeEEEeecCCceeeecccCCcchhhhh Confidence 2223347899999999999999999999997 7999999999999999999999888888888888875433 No 8 >protein:vir:80665 Length: 96 # NCBI annotation: gp9 # Family: family:all:30540 # MgeID: mge:1884 # MgeName: PA6 # Cross-refs: genbank:acc:YP_001285585;genbank:gi:148727091;genbank:GeneID:5247036 Probab=97.35 E-value=1.6e-07 Score=57.88 Aligned_cols=78 Identities=26% Similarity=0.372 Sum_probs=62.0 Q ss_pred CCc-ceeEEChHHHHHHhccHHHHHHHHHHHHHHHHhhC--------------CCceecccccCccceEEEeeCCHHHHH Q lcl|Aclame:pro 1 MAK-NLFKLNRSGVASMMKSPEMQAILKEKASAVKQRCG--------------PGYGQDMHVGKNRANAMVFAETYQAKR 65 (78) Q Consensus 1 Msk-vk~~lN~~G~rell~s~~~q~~l~~~A~~Ia~rAG--------------~gY~~d~~vgk~Ra~a~V~~~t~kA~~ 65 (78) |+. |.++||-.|+||+|+|+++|..|.+++|++...|. +|...+++|-+--+.+-+-+.-.--++ T Consensus 1 maqdvnvklnlpgirevlkssgvqsmlaergervrraasanvggnafdraqyrsglssevqvhrveavarigttykggkr 80 (96) T protein:vir:80 1 MAQDVNVKLNLPGIREVLKSSGVQSMLAERGERVRRAASANVGGNAFDRAQYRSGLSSEVQVHRVEAVARIGTTYKGGKR 80 (96) T ss_pred CCccceeeecchhHHHHHhhcchhHHHHhhhhHhhhhhccccCcchhhhhhhhccccchhhhhhhhhhhhhcccccccce Confidence 876 89999999999999999999999999999987762 233445555555555656555445678 Q ss_pred HhhhcchhhhhcC Q lcl|Aclame:pro 66 DNMKNNTILKAVR 78 (78) Q Consensus 66 dN~k~NTLLKA~~ 78 (78) -++||-||-+++- T Consensus 81 ieakhgtlarsig 93 (96) T protein:vir:80 81 IEAKHGTLARSIG 93 (96) T ss_pred eccccchhhhhcc Confidence 8899999999998 No 9 >protein:vir:98468 Length: 90 # NCBI annotation: ORF5 # Family: family:all:32435 # MgeID: mge:1589 # MgeName: VWB # Cross-refs: genbank:acc:NP_958283;genbank:gi:41057257;uniprot:Q38598;genbank:GeneID:2732852 Probab=94.53 E-value=0.00011 Score=42.23 Aligned_cols=73 Identities=16% Similarity=0.375 Sum_probs=56.1 Q ss_pred CCcc--eeEEChHHHHHHhccHHHHHHHHHHHHHHHHhh-------CCCceecccccCccceEEEeeC----CHHHHHHh Q lcl|Aclame:pro 1 MAKN--LFKLNRSGVASMMKSPEMQAILKEKASAVKQRC-------GPGYGQDMHVGKNRANAMVFAE----TYQAKRDN 67 (78) Q Consensus 1 Mskv--k~~lN~~G~rell~s~~~q~~l~~~A~~Ia~rA-------G~gY~~d~~vgk~Ra~a~V~~~----t~kA~~dN 67 (78) |+.- +...||.++...|+||+..+.|+.+...|-..| |.-|.+|+.-|-+|+++.|.-+ +++-- T Consensus 1 mar~~fr~~~nRRniA~FLrsp~tr~~iE~kTRa~E~AA~aaa~~D~GQFRTDv~~~~~RvRGAVIGDY~t~~pE~s--- 77 (90) T protein:vir:98 1 MAREGFQLSTTRRNVAAFLRSPGVRQAVEASTREIEAAARQAAEPDAGQFRTDITEESNRVRGAVIGDYATADPEDS--- 77 (90) T ss_pred CCCCCccccccchhhHHhhcChhHHHHHHHHHHHHHHHHhhhccccccceecccccccceecceeeccccCCChhhH--- Confidence 9984 555999999999999999999998876654333 4459999999999999999753 32221 Q ss_pred hhcchhhhhcC Q lcl|Aclame:pro 68 MKNNTILKAVR 78 (78) Q Consensus 68 ~k~NTLLKA~~ 78 (78) -..||+++. T Consensus 78 --RraLLRgLd 86 (90) T protein:vir:98 78 --RRALLRGLE 86 (90) T ss_pred --HHHHHHhhh Confidence 234788887 No 10 >protein:vir:78163 Length: 92 # NCBI annotation: hypothetical protein # Family: family:all:29889 # MgeID: mge:1847 # MgeName: Min1 # Cross-refs: genbank:acc:YP_001294805;genbank:gi:149882826;genbank:GeneID:5309191 Probab=93.20 E-value=0.00017 Score=41.20 Aligned_cols=77 Identities=21% Similarity=0.356 Sum_probs=68.0 Q ss_pred CCcceeEEChHHHHHHhccHHHHHHHHHHHHHHHHhh--------C---CCceecccccCccceEEEeeCCHHHHHHhhh Q lcl|Aclame:pro 1 MAKNLFKLNRSGVASMMKSPEMQAILKEKASAVKQRC--------G---PGYGQDMHVGKNRANAMVFAETYQAKRDNMK 69 (78) Q Consensus 1 Mskvk~~lN~~G~rell~s~~~q~~l~~~A~~Ia~rA--------G---~gY~~d~~vgk~Ra~a~V~~~t~kA~~dN~k 69 (78) |+. -|..|-+-|-+||+||++.+...-.|++...-| | ||......++..|-.+||.-.+.|.+.-+.+ T Consensus 1 mad-aftpNp~~FDqIl~s~~VrALt~gaAe~aLa~AKAsAPVDTGAYRDGL~iE~~q~~~RtT~MVVG~D~KTlLvESr 79 (92) T protein:vir:78 1 MAD-AFTPNPTWFDQIMRTPKVRALVDGVAEETLADAKASAPVDTGAYRDGLHIEHRQGRSRETAMVVGSDEKTLLIESR 79 (92) T ss_pred CCC-ccCCChhHHHHhhcccchhhhhhhhhhhhhhhhcccCcccccccccccchhhhhccccceeEEeecCcceeeeecc Confidence 998 599999999999999999999998888766444 2 5666677889999999999999999999999 Q ss_pred cchhhhhcC Q lcl|Aclame:pro 70 NNTILKAVR 78 (78) Q Consensus 70 ~NTLLKA~~ 78 (78) .--|-||+| T Consensus 80 TGNLakalk 88 (92) T protein:vir:78 80 TGNLARSVK 88 (92) T ss_pred cchHHHHHh Confidence 999999999 No 11 >protein:vir:5978 Length: 144 # NCBI annotation: hypothetical protein # Family: family:all:180 # MgeID: mge:125 # MgeName: SPP1 # Cross-refs: genbank:acc:NP_690678;genbank:geneid:6329146;genbank:gi:22855072;interpro:IPR011693;uniprot:O48447;genbank:GeneID:955318 Probab=55.15 E-value=0.15 Score=25.10 Aligned_cols=78 Identities=15% Similarity=0.109 Sum_probs=39.1 Q ss_pred CCcceeEEChHHHHHHhc---------cHHHHHHHHHHHHHHHHhhCC------Ccee-cc--cccCccceEEEeeCCHH Q lcl|Aclame:pro 1 MAKNLFKLNRSGVASMMK---------SPEMQAILKEKASAVKQRCGP------GYGQ-DM--HVGKNRANAMVFAETYQ 62 (78) Q Consensus 1 Mskvk~~lN~~G~rell~---------s~~~q~~l~~~A~~Ia~rAG~------gY~~-d~--~vgk~Ra~a~V~~~t~k 62 (78) ||.+.++++.+|+++|-+ ...++..|.+.|+.|.+.+-. |.-. +. .+..+-..+.|.+.... T Consensus 1 m~~ms~~i~~~g~~~l~~~l~~~~~~~~~~v~~~l~~~a~~i~~~ak~~apv~TG~Lr~SI~~~~~~~g~~~~V~~~~~Y 80 (144) T protein:vir:59 1 MALMSVRIDPSWRRIMSRNVRTFSGHVLTQVEQVIIKTAEKIAGLAASLAPVDEGNLKNSIQIDYKNNGLTAEITVGAEY 80 (144) T ss_pred CCcceeeehhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCccchhhhcCeeEEeecCcEEEEEecCCCc Confidence 999999999999999965 445667777778888766611 1000 00 01111123444444333 Q ss_pred HHHHhhhcc---------------------------------hhhhhc-----------C Q lcl|Aclame:pro 63 AKRDNMKNN---------------------------------TILKAV-----------R 78 (78) Q Consensus 63 A~~dN~k~N---------------------------------TLLKA~-----------~ 78 (78) |.+-+--+- .|-.|+ + T Consensus 81 A~~vE~GT~~~~~~~~~~~~~~~~~~~~~g~~~~t~g~~a~Pfl~pA~~~~~~~~~~~i~ 140 (144) T protein:vir:59 81 AIYVEYGTGIYAVDGNGRKTPWTYYSPKLGRYVRTQGAPAQPFFWPAVEEGGEYFEREMR 140 (144) T ss_pred cchhhcCccccccCCCccccccccccccccceecCCCCCCCcchhHHHHHHHHHHHHHHH Confidence 333332110 000011 1 No 12 >protein:vir:81251 Length: 94 # NCBI annotation: gp10 # Family: family:all:10296 # MgeID: mge:1893 # MgeName: BFK20 # Cross-refs: genbank:acc:YP_001456740;genbank:gi:157168383;uniprot:Q9MBJ5;genbank:GeneID:5580374 Probab=47.11 E-value=0.31 Score=23.37 Aligned_cols=77 Identities=18% Similarity=0.149 Sum_probs=51.8 Q ss_pred CCcceeEEChHHHHHHhccHHHHHHHHHHHHHHHHhhC-----C----CceecccccC-ccceEEEeeCCHHHHHHhhh- Q lcl|Aclame:pro 1 MAKNLFKLNRSGVASMMKSPEMQAILKEKASAVKQRCG-----P----GYGQDMHVGK-NRANAMVFAETYQAKRDNMK- 69 (78) Q Consensus 1 Mskvk~~lN~~G~rell~s~~~q~~l~~~A~~Ia~rAG-----~----gY~~d~~vgk-~Ra~a~V~~~t~kA~~dN~k- 69 (78) |++ ..++--.=.+.+.+.|.+|+.|++.|++.+.||- + .|...+-+-. .|+.+-|..++..--+-|-| T Consensus 1 mar-~~k~s~ql~~~~nrn~~i~qaLk~~ae~t~ArAq~Is~AeGG~A~y~~~sgiRPGGRa~~~VVSs~~~EE~Gtekt 79 (94) T protein:vir:81 1 MAR-HPKVSEQLWRKTNKKSGVGLALTKAAERTAARATAISRANGGKATYHTRDVIRPGGRRAVDVVSSDAAEERGTEEV 79 (94) T ss_pred CCC-cccccHHHHHhhccchhHHHHHHHhhHHHHHHHhhhhccCCceeeEEeeecccCcchhhhhhhcCChhhhhcchhH Confidence 998 5888888889999999999999999999999882 2 2443333222 26666666655432222222 Q ss_pred --cchhhhhcC Q lcl|Aclame:pro 70 --NNTILKAVR 78 (78) Q Consensus 70 --~NTLLKA~~ 78 (78) -|.|=+|++ T Consensus 80 kRi~ALrRAaR 90 (94) T protein:vir:81 80 RRINALRRAAR 90 (94) T ss_pred HHHHHhhhhhc Confidence 245677777 No 13 >protein:vir:108236 Length: 135 # NCBI annotation: gp13 # Family: family:all:10865 # MgeID: mge:2004 # MgeName: Giles # Cross-refs: genbank:acc:YP_001552342;genbank:gi:160700662;genbank:GeneID:5758956 Probab=45.25 E-value=0.09 Score=26.32 Aligned_cols=73 Identities=21% Similarity=0.300 Sum_probs=48.2 Q ss_pred CCc-ceeEEChHHHHH-HhccHHHHHHHHHHHHHHHHhhCCCceecccccCccceEEEeeCCHHHHHHhhhcchhhhhcC Q lcl|Aclame:pro 1 MAK-NLFKLNRSGVAS-MMKSPEMQAILKEKASAVKQRCGPGYGQDMHVGKNRANAMVFAETYQAKRDNMKNNTILKAVR 78 (78) Q Consensus 1 Msk-vk~~lN~~G~re-ll~s~~~q~~l~~~A~~Ia~rAG~gY~~d~~vgk~Ra~a~V~~~t~kA~~dN~k~NTLLKA~~ 78 (78) |+- =||+|||--+|= +-++|-+...++..||.+++.+|+--..+.|---....+.|.|+-. .++.-.--+|-+ T Consensus 1 mapkgkfvlnrgtvrwamnndphiagavdnvaekvandagpnatvehyrtdrkvsgvvvpaid-----qardgaatraaq 75 (135) T protein:vir:10 1 MAPKGKFVLNRGTVRWAMNNDPHIAGAVDNVAEKVANDAGPNATVEHYRTDRKVSGVVVPAID-----QARDGAATRAAQ 75 (135) T ss_pred CCCCcceeeecceeEeeeCCCCcccchhhhHHHhhhhccCCccchhhhhcccccceeeecccc-----cccccchhhhhh Confidence 764 699999998885 4568999999999999999999975443333322334566777532 223333333333 No 14 >protein:vir:94654 Length: 142 # NCBI annotation: tail component protein # Family: family:all:1084 # MgeID: mge:1527 # MgeName: mu1/6 # Cross-refs: genbank:acc:YP_579211;genbank:gi:93007447;genbank:GeneID:5076773 Probab=34.40 E-value=1.3 Score=19.97 Aligned_cols=78 Identities=12% Similarity=0.069 Sum_probs=38.6 Q ss_pred CCcceeEEChHHHHHHhc------cHHHHHHHHHHHHHHHHhh--------CC---CceecccccCccceEEEeeCCHHH Q lcl|Aclame:pro 1 MAKNLFKLNRSGVASMMK------SPEMQAILKEKASAVKQRC--------GP---GYGQDMHVGKNRANAMVFAETYQA 63 (78) Q Consensus 1 Mskvk~~lN~~G~rell~------s~~~q~~l~~~A~~Ia~rA--------G~---gY~~d~~vgk~Ra~a~V~~~t~kA 63 (78) ||++.|++|...|...++ ...+...|++.|+.|.+.| |. .....+........+.|.+....| T Consensus 1 Ma~~~~~~~~~~l~~~l~~~~~~~~~~~~~~l~~~a~~i~~~ak~~aPv~TG~Lr~SI~~~~~~~g~~~~~~v~~~~~YA 80 (142) T protein:vir:94 1 MAGLNYRVNSTEFQGALRAALDRLTGAAREATEAAANDMVNMAKGLCPVDTGRLRSSIQAVPSGGRFSFSVTIGTNVTYA 80 (142) T ss_pred CceeEEEecHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCccchhhhccceeeeccCCceEEEEEecCcccc Confidence 999999999977776554 3566677788888887666 21 111111111112234444444444 Q ss_pred HHHhhhcchh------hhhcC Q lcl|Aclame:pro 64 KRDNMKNNTI------LKAVR 78 (78) Q Consensus 64 ~~dN~k~NTL------LKA~~ 78 (78) .+-+--+-.- -|++. T Consensus 81 ~~vE~Gt~~~~i~pk~~k~l~ 101 (142) T protein:vir:94 81 ADVEYGTAPHVIVPKDKKALY 101 (142) T ss_pred hhhhccCCCceeccCCCccce Confidence 3333322110 01111 Done!