Query lcl|Aclame:protein:vir:107423|NCBI_annot:Bbp13|genbank:acc:NP_958682;genbank:gi:41179374;genbank:GeneID:2717217 Match_columns 681 No_of_seqs 194 out of 282 Neff 8.6 Searched_HMMs 1612 Date Sat Nov 30 20:44:06 2013 Command /home/guerois/workspace/virfam/python/lib/hhsearch//hhsearch2 -i .//seq/seq_37 -d /home/guerois/workspace/virfam/python/profile_database/capsid_neck_tail.hhm -glob -cpu 7 -o .//seq/HHR/seq_37_vs_rec_db.hhr No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM 1 protein:vir:107802 Length: 681 100.0 3E-240 2E-243 1333.8 81.6 681 1-681 1-681 (681) 2 protein:vir:98487 Length: 681 100.0 3E-240 2E-243 1333.8 81.6 681 1-681 1-681 (681) 3 protein:vir:107423 Length: 681 100.0 3E-240 2E-243 1333.8 81.6 681 1-681 1-681 (681) 4 protein:vir:7329 Length: 825 # 100.0 6E-221 4E-224 1228.0 74.9 679 1-681 1-824 (825) 5 protein:vir:95324 Length: 823 100.0 2E-215 1E-218 1198.3 77.1 679 1-681 1-822 (823) 6 protein:vir:103790 Length: 768 100.0 4E-204 2E-207 1135.7 76.3 677 1-681 1-766 (768) 7 protein:vir:102644 Length: 594 100.0 2E-186 9E-190 1039.3 64.1 569 1-681 1-593 (594) 8 protein:vir:99677 Length: 794 100.0 6E-168 4E-171 937.4 73.5 667 1-681 1-789 (794) 9 protein:vir:94713 Length: 785 100.0 2E-166 1E-169 929.4 70.7 660 1-681 1-780 (785) 10 protein:vir:94583 Length: 792 100.0 1E-165 9E-169 924.3 70.3 663 1-681 1-787 (792) 11 protein:vir:2203 Length: 794 # 100.0 3E-164 2E-167 916.8 69.8 664 1-681 1-789 (794) 12 protein:vir:10452 Length: 794 100.0 1E-162 6E-166 908.6 70.1 665 1-681 1-789 (794) 13 protein:vir:80253 Length: 777 100.0 2E-162 1E-165 907.5 67.6 654 1-681 1-772 (777) 14 protein:vir:1543 Length: 801 # 100.0 4E-161 2E-164 900.1 71.1 662 1-681 1-796 (801) 15 protein:vir:8887 Length: 808 # 100.0 2E-157 1E-160 879.9 71.6 661 1-681 1-803 (808) 16 protein:vir:6326 Length: 826 # 100.0 5E-157 3E-160 877.7 69.7 659 1-681 1-821 (826) 17 protein:vir:3366 Length: 801 # 100.0 5E-157 3E-160 877.5 69.4 657 1-681 1-796 (801) 18 protein:vir:78957 Length: 826 100.0 9E-156 6E-159 870.6 67.7 658 1-681 1-821 (826) 19 protein:vir:7021 Length: 803 # 100.0 6E-154 4E-157 860.7 66.5 662 1-681 1-798 (803) 20 protein:vir:97014 Length: 800 100.0 4E-153 2E-156 856.2 69.4 660 1-681 1-795 (800) 21 protein:vir:103341 Length: 806 100.0 2E-151 1E-154 847.3 71.2 662 1-681 1-801 (806) 22 protein:vir:105647 Length: 800 100.0 3E-151 2E-154 846.0 67.6 659 1-681 1-795 (800) 23 protein:vir:78703 Length: 905 100.0 1E-133 6E-137 749.8 67.2 660 1-681 1-899 (905) 24 protein:vir:100022 Length: 976 100.0 5E-129 3E-132 724.0 67.1 665 1-681 1-970 (976) 25 protein:vir:1778 Length: 680 # 100.0 6.3E-93 3.9E-96 526.1 43.5 459 1-472 1-680 (680) 26 protein:vir:2625 Length: 715 # 99.8 4.6E-16 2.9E-19 104.6 42.9 606 1-681 1-710 (715) 27 protein:vir:95475 Length: 771 99.6 1.5E-13 9.5E-17 90.8 42.2 621 1-681 1-769 (771) 28 protein:vir:80177 Length: 1027 99.5 1.5E-14 9.2E-18 96.4 25.3 656 1-681 1-999 (1027) 29 protein:vir:8837 Length: 513 # 99.5 1.1E-11 7.1E-15 80.6 38.6 481 1-681 1-511 (513) 30 protein:vir:94602 Length: 1012 99.4 5.3E-11 3.3E-14 76.9 32.6 622 1-681 213-1005(1012) 31 protein:vir:3133 Length: 911 # 99.3 2.7E-10 1.7E-13 73.1 35.3 628 1-681 1-816 (911) 32 protein:vir:105563 Length: 396 98.1 4E-06 2.5E-09 50.2 20.8 369 1-441 1-396 (396) 33 protein:vir:93631 Length: 580 93.3 0.008 5E-06 32.1 33.4 491 39-600 1-580 (580) 34 protein:vir:5120 Length: 615 # 93.0 0.0093 5.8E-06 31.7 34.6 523 1-681 30-595 (615) 35 protein:vir:96666 Length: 462 64.6 0.062 3.8E-05 27.2 3.6 294 1-333 119-462 (462) 36 protein:vir:104388 Length: 566 63.4 0.32 0.0002 23.3 34.7 502 1-615 1-566 (566) 37 protein:vir:9268 Length: 472 # 55.1 0.49 0.0003 22.3 33.6 432 129-678 1-472 (472) 38 protein:vir:108312 Length: 458 32.6 1.4 0.00088 19.8 36.9 416 134-678 1-458 (458) 39 protein:vir:105525 Length: 472 31.7 1.5 0.00092 19.7 30.9 431 129-676 1-472 (472) 40 protein:vir:7329 Length: 825 # 30.2 1.6 0.00099 19.5 37.1 573 53-681 1-734 (825) 41 protein:vir:2109 Length: 472 # 29.2 1.7 0.001 19.3 35.1 433 129-678 1-472 (472) 42 protein:vir:100960 Length: 472 25.7 2 0.0013 18.9 33.3 432 129-678 1-472 (472) 43 protein:vir:95324 Length: 823 22.4 2.5 0.0015 18.4 38.7 595 36-681 1-754 (823) No 1 >protein:vir:107802 Length: 681 # NCBI annotation: hypothetical protein predicted by GeneMark # Family: family:all:780 # MgeID: mge:1673 # MgeName: BIP-1 # Cross-refs: genbank:acc:NP_996623;genbank:gi:45580757;genbank:GeneID:2767878 Probab=100.00 E-value=2.9e-240 Score=1333.78 Aligned_cols=681 Identities=100% Similarity=1.467 Sum_probs=669.2 Q ss_pred CCcceEeecccccccccchhcccchHHHHHHHHhhhhccEEeeccCeeeCCchheeeecCCCcCceEEEEEEeCCCCeEE Q lcl|Aclame:pro 1 MSNVRVLQRSFGGGEISPEMFGRIDDVKYQSGLAICRNFVVKPQGPAENRAGFAFVREVKDSAKKVRLIPFTYSVTQTMV 80 (681) Q Consensus 1 M~~~~~~q~~f~~GElsP~l~~R~D~~~y~~~~~~~~N~~~~~~Gg~~rRpG~~~v~~~~~~~~~~rlipf~~~~~~~y~ 80 (681) |+|++++|+||++|||||+|++|.||++|++||++||||+++||||++|||||+||+++++.++++|||||+|+++|+|+ T Consensus 1 m~~~~~~~~~f~~Ge~~p~l~~r~D~~~y~~~~~~~~N~~~~~~G~~~~R~g~~~~~~~~~~~~~~rlipf~~~~~~~~~ 80 (681) T protein:vir:10 1 MSNVRVLQRSFGGGEISPEMFGRIDDVKYQSGLAICRNFVVKPQGPAENRAGFAFVREVKDSAKKVRLIPFTYSVTQTMV 80 (681) T ss_pred CcceeEeeeecCCceeeeeeccchhHHHHHHHHHHhcCcEEEecCCceecChhHhhhhcCCCCCcEEEEEEEeCCCceEE Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred EEEcCCEEEEEeCCcEEeeCCEEEEEeCCCCchhhceeeEEEeccEEEEEcCCcceEEEEECCCCcEEEEEEeeccCccc Q lcl|Aclame:pro 81 IELGAGYFRFHTNGGTLLDGAVPYEIANPYAEADLFNIHYVQSADVLTLVHPNYAPRELRRLGATNWQLATIAFTSPVAT 160 (681) Q Consensus 81 lefg~~~irv~~~~~~v~~~~~~~~i~TPy~~a~l~~l~~~qsaD~l~lvh~~~~p~~l~R~~~~~W~~~~~~f~~~~~~ 160 (681) ||||+++||||++++++++++.|+|++|||++++|++|+|+|+||+|||||++|||++|+|+++++|+++++.|..+|.+ T Consensus 81 l~~g~~~~r~~~~~~~~~~~~~~~~~~tpy~~~~l~~l~~~q~aD~~~i~h~~~~p~~L~r~~~~~W~l~~~~f~~~p~~ 160 (681) T protein:vir:10 81 IELGAGYFRFHTNGGTLLDGAVPYEIANPYAEADLFNIHYVQSADVLTLVHPNYAPRELRRLGATNWQLATIAFTSPVAT 160 (681) T ss_pred EEEeCCeEEEEeCCcEEeeCcEeEEecCCCChhhhcCceEEEEcCEEEEECCCCcceEEEEccCCceEEEEEEecccccc Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred ccccceeeecCcceeeEEEEEEEEEeccceEEecCcccceeccceeccceeeeEEeeccCCceeeeecccceeEEEeecc Q lcl|Aclame:pro 161 PTSVTATSNNKGTDYTYRYVVTALDAEGKTESAPSSAGTCTNNLFTNGGANTIAWSASSGASRYNVYKEQGGLYGYIGQT 240 (681) Q Consensus 161 ~~~~t~t~~~~~~~~t~~~~v~a~~~~g~~~s~~s~~~t~~~~~~~~~~~~~~~w~a~~~~~~~~v~~~~~~~~~~~~~~ 240 (681) +.+.+++...++..+++++.+++.+..+..++.++...+.+.+.+..+.+++..|.+++++.++++++...+++++++.+ T Consensus 161 p~~~~at~~~~~~~~t~~~~v~avda~t~~~s~~~~~~tvt~~~~~~~~~~t~~w~a~~g~~~~~V~~~~~gi~g~ig~~ 240 (681) T protein:vir:10 161 PTSVTATSNNKGTDYTYRYVVTALDAEGKTESAPSSAGTCTNNLFTNGGANTIAWSASSGASRYNVYKEQGGLYGYIGQT 240 (681) T ss_pred ceeeeeeccCCccceeEeEEEEEeecccceeecCCcceEEeeeeecCCcceeEEEEecCCceeeeecccceeEEEEeecc Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred ceeEEEeccccccccccccccccCccccCCceeEEEEEcCeEEEEecCCCccEEEEEeccChhcccccCCCcCCccEEEE Q lcl|Aclame:pro 241 TGTSLVDDNIAPDLSVTPPIYDAVFNAAGDYPAAVSYFEQRRCFAGTTNKPQNIWMTRSGTESAMSYSLPVRDDDRVAFR 320 (681) Q Consensus 241 ~~t~~~~~~~~~~~~~~~~~~~~~~s~~~g~p~~v~f~~~RL~~~~~~~~p~~v~~S~~gd~~nF~~~~~~~D~D~i~~~ 320 (681) .++++.+.++.++..++++|...+|+..+|||++|+||||||+|+|++.+||+|||||+|||+||+++++++|||||+++ T Consensus 241 ~~~~~~~~~~~~~~~~t~~~~~~~~~~~~gyP~~v~f~q~RL~f~~~~~~p~~v~~Srsgdy~nF~~~~~~~ddD~i~~~ 320 (681) T protein:vir:10 241 TGTSLVDDNIAPDLSVTPPIYDAVFNAAGDYPAAVSYFEQRRCFAGTTNKPQNIWMTRSGTESAMSYSLPVRDDDRVAFR 320 (681) T ss_pred ceeeeeecccccCccccccccccccccCCCceEEEEEEcceEEEeeCCCCCcEEEEEcccCcccccccCCCCCCccEEEE Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred EcCCCceEEEEEeecCcEEEEecCcEEEEecCCCcccccceeEEEEeeccCCcccccEEeCCeEEEEEcCCCEEEEEEEe Q lcl|Aclame:pro 321 VAAREANAIRHIVPLTELLLLTSSGEWRVASVNSDAVTPTTISVRPQSYVGATDVQPVVVNNTTIYGAARGGHVRELAYN 400 (681) Q Consensus 321 ~~~~~~~~i~~~~~~~~Llv~t~~~e~~~~~~~~~~ltP~~~~~~~~s~~g~~~~~Pv~vg~~v~fv~~~g~~vre~~~~ 400 (681) +++++++.|+|++++++|||||+++||+|+++++++|||+|++++++|.|||++|+|+.+|++++|+|++|++||||+|+ T Consensus 321 ~~~~~~~~i~~~v~~~~lli~t~~~e~~l~~~~~~~lTP~~~~~~~~s~~g~~~~~Pv~vg~~v~fv~~~g~~vre~~y~ 400 (681) T protein:vir:10 321 VAAREANAIRHIVPLTELLLLTSSGEWRVASVNSDAVTPTTISVRPQSYVGATDVQPVVVNNTTIYGAARGGHVRELAYN 400 (681) T ss_pred EcCCcceeEEEEEecCcEEEEEcCcEEEEecCCCccccceeEEEEEeeeeccccccceeeCCeEEEEecCCCEEEEEEEe Confidence 99999999999999999999999999999987778999999999999999999999999999999999999999999999 Q ss_pred eeccceeccchhhhhHHhcCCCCEEEEEEecCCCEEEEEEcCCCeEEEEEEecccceEEEEEeccCCceEEEEEEeeCCC Q lcl|Aclame:pro 401 WQANGFVTGDLSLRAAHLFDNLDILDMAYAKAPQPIVWFISSSGKLLGLTYVPEQQIGAWHQHDTDGVFESCAVVAEGNE 480 (681) Q Consensus 401 ~~~~~~~~~dlt~~~~hl~~~~~~~~~~~~~~p~~~~~~~~~dg~l~~~ty~~~q~v~aW~~w~~~g~~~~v~~~~~~~~ 480 (681) +++|+|+++|+|++|+||++++++++|+++++|++++||+++||+|++|+|++||||+|||||+++|+|++||+++++.+ T Consensus 401 ~~~d~~~~~dlt~~a~Hl~~~~~i~~~a~~~~p~~~~~~v~~dg~l~~~ty~~eq~v~aW~~~~~~g~v~~v~~i~~~~~ 480 (681) T protein:vir:10 401 WQANGFVTGDLSLRAAHLFDNLDILDMAYAKAPQPIVWFISSSGKLLGLTYVPEQQIGAWHQHDTDGVFESCAVVAEGNE 480 (681) T ss_pred eecCceeccchhhhhhhhcCCCCeEEEEEecCCCEEEEEEecCCcEEEEEEecccceeeEEEEecCCcEEEEEEecCCCC Confidence 99999999999999999999889999999999999999999999999999999999999999999999999999999999 Q ss_pred CEEEEEEEECCCCceEEEEeeccCccccccccceEeecceeeccCcceeeccCCccCCcEEEEEeCCeeeccEeecCCEE Q lcl|Aclame:pro 481 DRLYAVVRRTIGGNEVRYVERMASRQFDAQADAFFVDSGLTYSGEPVSHISGLEHLEGKTVSILADGAVHPQRVVTDGAI 560 (681) Q Consensus 481 d~l~~~v~r~~~g~~~~~ie~~~~~~~~~~~~~~~lD~~~~y~~~~~~~~~gl~~l~G~~v~v~adG~~~~~~~v~~g~i 560 (681) |+||++|+|+++|+.++|||+|+++.++..++++||||+++|.+.++.+++||+||+|++|.+++||+++++.+|.+|+| T Consensus 481 d~l~~vv~r~~~g~~~~yie~~~~~~~~~~~~~~~vD~~~t~~~~~~~~~sgl~~leG~tv~i~aDG~~~~~~~V~~G~i 560 (681) T protein:vir:10 481 DRLYAVVRRTIGGNEVRYVERMASRQFDAQADAFFVDSGLTYSGEPVSHISGLEHLEGKTVSILADGAVHPQRVVTDGAI 560 (681) T ss_pred cEEEEEEEecCCCCeEEEEEecCCccccccccceEeeccccccCcceeeeccccCCCCcEEEEEeCCeecCcEeecCcEE Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred EeCCCCCeEEEeeecceeEEecceEecCCCcccccceeEEEEEEEEEeccccEEEecCCCeeEEeeeecccccCCcCCcc Q lcl|Aclame:pro 561 DLDVEAGTVHIGLPITAELQTLPVAMQLDGSFGQGRVKNINKLWLRVHRSSGIFAGPHADALTEVKQRTSEPYGSPPALK 640 (681) Q Consensus 561 ~l~~~~~~v~vG~~y~~~v~~~p~~~~~~~~~~~~~~~~i~rv~l~~~~S~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 640 (681) +|+.++++++|||+|+++++++|++++.++++.+++++||+|++||+++|.+++++.+.+.+++++++.++.++.+++++ T Consensus 561 tl~~~~~~v~VGl~Y~s~i~~lp~~~~~~~g~~~g~~~ri~rv~lr~~~S~g~~~~~~~~~l~~~~~~~~~~~g~~~~l~ 640 (681) T protein:vir:10 561 DLDVEAGTVHIGLPITAELQTLPVAMQLDGSFGQGRVKNINKLWLRVHRSSGIFAGPHADALTEVKQRTSEPYGSPPALK 640 (681) T ss_pred EeCcCCceEEEeeeceeEEEecceeeecCCcccCCceEEEEEEEEEEEcccceEEeeCCCceEEEEEeccccccccCCcc Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred cceEEEEecCCcCcceEEEEEECCccCEEEEEEEEEEEEcC Q lcl|Aclame:pro 641 SEEIPLVLSPKWGDSGQLFVRQADPLPLMIVSMSAEIAIGA 681 (681) Q Consensus 641 tG~~~v~~~~~~~~~~~v~I~~~~P~P~tvlai~~ev~vg~ 681 (681) ||++++++.++|+++.+|+|+|++|+||+|+||+|||+||| T Consensus 641 TG~~~v~v~~~~~~~~~v~I~qd~PlP~tvlsi~~ev~vgg 681 (681) T protein:vir:10 641 SEEIPLVLSPKWGDSGQLFVRQADPLPLMIVSMSAEIAIGA 681 (681) T ss_pred CCeEEEEeCCCcCcceEEEEEECCCcCEEEEEeeEEEEeeC Confidence 99999999999999999999999999999999999999999 No 2 >protein:vir:98487 Length: 681 # NCBI annotation: hypothetical protein predicted by GeneMark # Family: family:all:780 # MgeID: mge:1592 # MgeName: BMP-1 # Cross-refs: genbank:acc:NP_996575;genbank:gi:45569506;genbank:GeneID:2767815 Probab=100.00 E-value=2.9e-240 Score=1333.78 Aligned_cols=681 Identities=100% Similarity=1.467 Sum_probs=669.2 Q ss_pred CCcceEeecccccccccchhcccchHHHHHHHHhhhhccEEeeccCeeeCCchheeeecCCCcCceEEEEEEeCCCCeEE Q lcl|Aclame:pro 1 MSNVRVLQRSFGGGEISPEMFGRIDDVKYQSGLAICRNFVVKPQGPAENRAGFAFVREVKDSAKKVRLIPFTYSVTQTMV 80 (681) Q Consensus 1 M~~~~~~q~~f~~GElsP~l~~R~D~~~y~~~~~~~~N~~~~~~Gg~~rRpG~~~v~~~~~~~~~~rlipf~~~~~~~y~ 80 (681) |+|++++|+||++|||||+|++|.||++|++||++||||+++||||++|||||+||+++++.++++|||||+|+++|+|+ T Consensus 1 m~~~~~~~~~f~~Ge~~p~l~~r~D~~~y~~~~~~~~N~~~~~~G~~~~R~g~~~~~~~~~~~~~~rlipf~~~~~~~~~ 80 (681) T protein:vir:98 1 MSNVRVLQRSFGGGEISPEMFGRIDDVKYQSGLAICRNFVVKPQGPAENRAGFAFVREVKDSAKKVRLIPFTYSVTQTMV 80 (681) T ss_pred CcceeEeeeecCCceeeeeeccchhHHHHHHHHHHhcCcEEEecCCceecChhHhhhhcCCCCCcEEEEEEEeCCCceEE Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred EEEcCCEEEEEeCCcEEeeCCEEEEEeCCCCchhhceeeEEEeccEEEEEcCCcceEEEEECCCCcEEEEEEeeccCccc Q lcl|Aclame:pro 81 IELGAGYFRFHTNGGTLLDGAVPYEIANPYAEADLFNIHYVQSADVLTLVHPNYAPRELRRLGATNWQLATIAFTSPVAT 160 (681) Q Consensus 81 lefg~~~irv~~~~~~v~~~~~~~~i~TPy~~a~l~~l~~~qsaD~l~lvh~~~~p~~l~R~~~~~W~~~~~~f~~~~~~ 160 (681) ||||+++||||++++++++++.|+|++|||++++|++|+|+|+||+|||||++|||++|+|+++++|+++++.|..+|.+ T Consensus 81 l~~g~~~~r~~~~~~~~~~~~~~~~~~tpy~~~~l~~l~~~q~aD~~~i~h~~~~p~~L~r~~~~~W~l~~~~f~~~p~~ 160 (681) T protein:vir:98 81 IELGAGYFRFHTNGGTLLDGAVPYEIANPYAEADLFNIHYVQSADVLTLVHPNYAPRELRRLGATNWQLATIAFTSPVAT 160 (681) T ss_pred EEEeCCeEEEEeCCcEEeeCcEeEEecCCCChhhhcCceEEEEcCEEEEECCCCcceEEEEccCCceEEEEEEecccccc Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred ccccceeeecCcceeeEEEEEEEEEeccceEEecCcccceeccceeccceeeeEEeeccCCceeeeecccceeEEEeecc Q lcl|Aclame:pro 161 PTSVTATSNNKGTDYTYRYVVTALDAEGKTESAPSSAGTCTNNLFTNGGANTIAWSASSGASRYNVYKEQGGLYGYIGQT 240 (681) Q Consensus 161 ~~~~t~t~~~~~~~~t~~~~v~a~~~~g~~~s~~s~~~t~~~~~~~~~~~~~~~w~a~~~~~~~~v~~~~~~~~~~~~~~ 240 (681) +.+.+++...++..+++++.+++.+..+..++.++...+.+.+.+..+.+++..|.+++++.++++++...+++++++.+ T Consensus 161 p~~~~at~~~~~~~~t~~~~v~avda~t~~~s~~~~~~tvt~~~~~~~~~~t~~w~a~~g~~~~~V~~~~~gi~g~ig~~ 240 (681) T protein:vir:98 161 PTSVTATSNNKGTDYTYRYVVTALDAEGKTESAPSSAGTCTNNLFTNGGANTIAWSASSGASRYNVYKEQGGLYGYIGQT 240 (681) T ss_pred ceeeeeeccCCccceeEeEEEEEeecccceeecCCcceEEeeeeecCCcceeEEEEecCCceeeeecccceeEEEEeecc Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred ceeEEEeccccccccccccccccCccccCCceeEEEEEcCeEEEEecCCCccEEEEEeccChhcccccCCCcCCccEEEE Q lcl|Aclame:pro 241 TGTSLVDDNIAPDLSVTPPIYDAVFNAAGDYPAAVSYFEQRRCFAGTTNKPQNIWMTRSGTESAMSYSLPVRDDDRVAFR 320 (681) Q Consensus 241 ~~t~~~~~~~~~~~~~~~~~~~~~~s~~~g~p~~v~f~~~RL~~~~~~~~p~~v~~S~~gd~~nF~~~~~~~D~D~i~~~ 320 (681) .++++.+.++.++..++++|...+|+..+|||++|+||||||+|+|++.+||+|||||+|||+||+++++++|||||+++ T Consensus 241 ~~~~~~~~~~~~~~~~t~~~~~~~~~~~~gyP~~v~f~q~RL~f~~~~~~p~~v~~Srsgdy~nF~~~~~~~ddD~i~~~ 320 (681) T protein:vir:98 241 TGTSLVDDNIAPDLSVTPPIYDAVFNAAGDYPAAVSYFEQRRCFAGTTNKPQNIWMTRSGTESAMSYSLPVRDDDRVAFR 320 (681) T ss_pred ceeeeeecccccCccccccccccccccCCCceEEEEEEcceEEEeeCCCCCcEEEEEcccCcccccccCCCCCCccEEEE Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred EcCCCceEEEEEeecCcEEEEecCcEEEEecCCCcccccceeEEEEeeccCCcccccEEeCCeEEEEEcCCCEEEEEEEe Q lcl|Aclame:pro 321 VAAREANAIRHIVPLTELLLLTSSGEWRVASVNSDAVTPTTISVRPQSYVGATDVQPVVVNNTTIYGAARGGHVRELAYN 400 (681) Q Consensus 321 ~~~~~~~~i~~~~~~~~Llv~t~~~e~~~~~~~~~~ltP~~~~~~~~s~~g~~~~~Pv~vg~~v~fv~~~g~~vre~~~~ 400 (681) +++++++.|+|++++++|||||+++||+|+++++++|||+|++++++|.|||++|+|+.+|++++|+|++|++||||+|+ T Consensus 321 ~~~~~~~~i~~~v~~~~lli~t~~~e~~l~~~~~~~lTP~~~~~~~~s~~g~~~~~Pv~vg~~v~fv~~~g~~vre~~y~ 400 (681) T protein:vir:98 321 VAAREANAIRHIVPLTELLLLTSSGEWRVASVNSDAVTPTTISVRPQSYVGATDVQPVVVNNTTIYGAARGGHVRELAYN 400 (681) T ss_pred EcCCcceeEEEEEecCcEEEEEcCcEEEEecCCCccccceeEEEEEeeeeccccccceeeCCeEEEEecCCCEEEEEEEe Confidence 99999999999999999999999999999987778999999999999999999999999999999999999999999999 Q ss_pred eeccceeccchhhhhHHhcCCCCEEEEEEecCCCEEEEEEcCCCeEEEEEEecccceEEEEEeccCCceEEEEEEeeCCC Q lcl|Aclame:pro 401 WQANGFVTGDLSLRAAHLFDNLDILDMAYAKAPQPIVWFISSSGKLLGLTYVPEQQIGAWHQHDTDGVFESCAVVAEGNE 480 (681) Q Consensus 401 ~~~~~~~~~dlt~~~~hl~~~~~~~~~~~~~~p~~~~~~~~~dg~l~~~ty~~~q~v~aW~~w~~~g~~~~v~~~~~~~~ 480 (681) +++|+|+++|+|++|+||++++++++|+++++|++++||+++||+|++|+|++||||+|||||+++|+|++||+++++.+ T Consensus 401 ~~~d~~~~~dlt~~a~Hl~~~~~i~~~a~~~~p~~~~~~v~~dg~l~~~ty~~eq~v~aW~~~~~~g~v~~v~~i~~~~~ 480 (681) T protein:vir:98 401 WQANGFVTGDLSLRAAHLFDNLDILDMAYAKAPQPIVWFISSSGKLLGLTYVPEQQIGAWHQHDTDGVFESCAVVAEGNE 480 (681) T ss_pred eecCceeccchhhhhhhhcCCCCeEEEEEecCCCEEEEEEecCCcEEEEEEecccceeeEEEEecCCcEEEEEEecCCCC Confidence 99999999999999999999889999999999999999999999999999999999999999999999999999999999 Q ss_pred CEEEEEEEECCCCceEEEEeeccCccccccccceEeecceeeccCcceeeccCCccCCcEEEEEeCCeeeccEeecCCEE Q lcl|Aclame:pro 481 DRLYAVVRRTIGGNEVRYVERMASRQFDAQADAFFVDSGLTYSGEPVSHISGLEHLEGKTVSILADGAVHPQRVVTDGAI 560 (681) Q Consensus 481 d~l~~~v~r~~~g~~~~~ie~~~~~~~~~~~~~~~lD~~~~y~~~~~~~~~gl~~l~G~~v~v~adG~~~~~~~v~~g~i 560 (681) |+||++|+|+++|+.++|||+|+++.++..++++||||+++|.+.++.+++||+||+|++|.+++||+++++.+|.+|+| T Consensus 481 d~l~~vv~r~~~g~~~~yie~~~~~~~~~~~~~~~vD~~~t~~~~~~~~~sgl~~leG~tv~i~aDG~~~~~~~V~~G~i 560 (681) T protein:vir:98 481 DRLYAVVRRTIGGNEVRYVERMASRQFDAQADAFFVDSGLTYSGEPVSHISGLEHLEGKTVSILADGAVHPQRVVTDGAI 560 (681) T ss_pred cEEEEEEEecCCCCeEEEEEecCCccccccccceEeeccccccCcceeeeccccCCCCcEEEEEeCCeecCcEeecCcEE Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred EeCCCCCeEEEeeecceeEEecceEecCCCcccccceeEEEEEEEEEeccccEEEecCCCeeEEeeeecccccCCcCCcc Q lcl|Aclame:pro 561 DLDVEAGTVHIGLPITAELQTLPVAMQLDGSFGQGRVKNINKLWLRVHRSSGIFAGPHADALTEVKQRTSEPYGSPPALK 640 (681) Q Consensus 561 ~l~~~~~~v~vG~~y~~~v~~~p~~~~~~~~~~~~~~~~i~rv~l~~~~S~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 640 (681) +|+.++++++|||+|+++++++|++++.++++.+++++||+|++||+++|.+++++.+.+.+++++++.++.++.+++++ T Consensus 561 tl~~~~~~v~VGl~Y~s~i~~lp~~~~~~~g~~~g~~~ri~rv~lr~~~S~g~~~~~~~~~l~~~~~~~~~~~g~~~~l~ 640 (681) T protein:vir:98 561 DLDVEAGTVHIGLPITAELQTLPVAMQLDGSFGQGRVKNINKLWLRVHRSSGIFAGPHADALTEVKQRTSEPYGSPPALK 640 (681) T ss_pred EeCcCCceEEEeeeceeEEEecceeeecCCcccCCceEEEEEEEEEEEcccceEEeeCCCceEEEEEeccccccccCCcc Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred cceEEEEecCCcCcceEEEEEECCccCEEEEEEEEEEEEcC Q lcl|Aclame:pro 641 SEEIPLVLSPKWGDSGQLFVRQADPLPLMIVSMSAEIAIGA 681 (681) Q Consensus 641 tG~~~v~~~~~~~~~~~v~I~~~~P~P~tvlai~~ev~vg~ 681 (681) ||++++++.++|+++.+|+|+|++|+||+|+||+|||+||| T Consensus 641 TG~~~v~v~~~~~~~~~v~I~qd~PlP~tvlsi~~ev~vgg 681 (681) T protein:vir:98 641 SEEIPLVLSPKWGDSGQLFVRQADPLPLMIVSMSAEIAIGA 681 (681) T ss_pred CCeEEEEeCCCcCcceEEEEEECCCcCEEEEEeeEEEEeeC Confidence 99999999999999999999999999999999999999999 No 3 >protein:vir:107423 Length: 681 # NCBI annotation: Bbp13 # Family: family:all:780 # MgeID: mge:1537 # MgeName: BPP-1 # Cross-refs: genbank:acc:NP_958682;genbank:gi:41179374;genbank:GeneID:2717217 Probab=100.00 E-value=2.9e-240 Score=1333.78 Aligned_cols=681 Identities=100% Similarity=1.467 Sum_probs=669.2 Q ss_pred CCcceEeecccccccccchhcccchHHHHHHHHhhhhccEEeeccCeeeCCchheeeecCCCcCceEEEEEEeCCCCeEE Q lcl|Aclame:pro 1 MSNVRVLQRSFGGGEISPEMFGRIDDVKYQSGLAICRNFVVKPQGPAENRAGFAFVREVKDSAKKVRLIPFTYSVTQTMV 80 (681) Q Consensus 1 M~~~~~~q~~f~~GElsP~l~~R~D~~~y~~~~~~~~N~~~~~~Gg~~rRpG~~~v~~~~~~~~~~rlipf~~~~~~~y~ 80 (681) |+|++++|+||++|||||+|++|.||++|++||++||||+++||||++|||||+||+++++.++++|||||+|+++|+|+ T Consensus 1 m~~~~~~~~~f~~Ge~~p~l~~r~D~~~y~~~~~~~~N~~~~~~G~~~~R~g~~~~~~~~~~~~~~rlipf~~~~~~~~~ 80 (681) T protein:vir:10 1 MSNVRVLQRSFGGGEISPEMFGRIDDVKYQSGLAICRNFVVKPQGPAENRAGFAFVREVKDSAKKVRLIPFTYSVTQTMV 80 (681) T ss_pred CcceeEeeeecCCceeeeeeccchhHHHHHHHHHHhcCcEEEecCCceecChhHhhhhcCCCCCcEEEEEEEeCCCceEE Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred EEEcCCEEEEEeCCcEEeeCCEEEEEeCCCCchhhceeeEEEeccEEEEEcCCcceEEEEECCCCcEEEEEEeeccCccc Q lcl|Aclame:pro 81 IELGAGYFRFHTNGGTLLDGAVPYEIANPYAEADLFNIHYVQSADVLTLVHPNYAPRELRRLGATNWQLATIAFTSPVAT 160 (681) Q Consensus 81 lefg~~~irv~~~~~~v~~~~~~~~i~TPy~~a~l~~l~~~qsaD~l~lvh~~~~p~~l~R~~~~~W~~~~~~f~~~~~~ 160 (681) ||||+++||||++++++++++.|+|++|||++++|++|+|+|+||+|||||++|||++|+|+++++|+++++.|..+|.+ T Consensus 81 l~~g~~~~r~~~~~~~~~~~~~~~~~~tpy~~~~l~~l~~~q~aD~~~i~h~~~~p~~L~r~~~~~W~l~~~~f~~~p~~ 160 (681) T protein:vir:10 81 IELGAGYFRFHTNGGTLLDGAVPYEIANPYAEADLFNIHYVQSADVLTLVHPNYAPRELRRLGATNWQLATIAFTSPVAT 160 (681) T ss_pred EEEeCCeEEEEeCCcEEeeCcEeEEecCCCChhhhcCceEEEEcCEEEEECCCCcceEEEEccCCceEEEEEEecccccc Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred ccccceeeecCcceeeEEEEEEEEEeccceEEecCcccceeccceeccceeeeEEeeccCCceeeeecccceeEEEeecc Q lcl|Aclame:pro 161 PTSVTATSNNKGTDYTYRYVVTALDAEGKTESAPSSAGTCTNNLFTNGGANTIAWSASSGASRYNVYKEQGGLYGYIGQT 240 (681) Q Consensus 161 ~~~~t~t~~~~~~~~t~~~~v~a~~~~g~~~s~~s~~~t~~~~~~~~~~~~~~~w~a~~~~~~~~v~~~~~~~~~~~~~~ 240 (681) +.+.+++...++..+++++.+++.+..+..++.++...+.+.+.+..+.+++..|.+++++.++++++...+++++++.+ T Consensus 161 p~~~~at~~~~~~~~t~~~~v~avda~t~~~s~~~~~~tvt~~~~~~~~~~t~~w~a~~g~~~~~V~~~~~gi~g~ig~~ 240 (681) T protein:vir:10 161 PTSVTATSNNKGTDYTYRYVVTALDAEGKTESAPSSAGTCTNNLFTNGGANTIAWSASSGASRYNVYKEQGGLYGYIGQT 240 (681) T ss_pred ceeeeeeccCCccceeEeEEEEEeecccceeecCCcceEEeeeeecCCcceeEEEEecCCceeeeecccceeEEEEeecc Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred ceeEEEeccccccccccccccccCccccCCceeEEEEEcCeEEEEecCCCccEEEEEeccChhcccccCCCcCCccEEEE Q lcl|Aclame:pro 241 TGTSLVDDNIAPDLSVTPPIYDAVFNAAGDYPAAVSYFEQRRCFAGTTNKPQNIWMTRSGTESAMSYSLPVRDDDRVAFR 320 (681) Q Consensus 241 ~~t~~~~~~~~~~~~~~~~~~~~~~s~~~g~p~~v~f~~~RL~~~~~~~~p~~v~~S~~gd~~nF~~~~~~~D~D~i~~~ 320 (681) .++++.+.++.++..++++|...+|+..+|||++|+||||||+|+|++.+||+|||||+|||+||+++++++|||||+++ T Consensus 241 ~~~~~~~~~~~~~~~~t~~~~~~~~~~~~gyP~~v~f~q~RL~f~~~~~~p~~v~~Srsgdy~nF~~~~~~~ddD~i~~~ 320 (681) T protein:vir:10 241 TGTSLVDDNIAPDLSVTPPIYDAVFNAAGDYPAAVSYFEQRRCFAGTTNKPQNIWMTRSGTESAMSYSLPVRDDDRVAFR 320 (681) T ss_pred ceeeeeecccccCccccccccccccccCCCceEEEEEEcceEEEeeCCCCCcEEEEEcccCcccccccCCCCCCccEEEE Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred EcCCCceEEEEEeecCcEEEEecCcEEEEecCCCcccccceeEEEEeeccCCcccccEEeCCeEEEEEcCCCEEEEEEEe Q lcl|Aclame:pro 321 VAAREANAIRHIVPLTELLLLTSSGEWRVASVNSDAVTPTTISVRPQSYVGATDVQPVVVNNTTIYGAARGGHVRELAYN 400 (681) Q Consensus 321 ~~~~~~~~i~~~~~~~~Llv~t~~~e~~~~~~~~~~ltP~~~~~~~~s~~g~~~~~Pv~vg~~v~fv~~~g~~vre~~~~ 400 (681) +++++++.|+|++++++|||||+++||+|+++++++|||+|++++++|.|||++|+|+.+|++++|+|++|++||||+|+ T Consensus 321 ~~~~~~~~i~~~v~~~~lli~t~~~e~~l~~~~~~~lTP~~~~~~~~s~~g~~~~~Pv~vg~~v~fv~~~g~~vre~~y~ 400 (681) T protein:vir:10 321 VAAREANAIRHIVPLTELLLLTSSGEWRVASVNSDAVTPTTISVRPQSYVGATDVQPVVVNNTTIYGAARGGHVRELAYN 400 (681) T ss_pred EcCCcceeEEEEEecCcEEEEEcCcEEEEecCCCccccceeEEEEEeeeeccccccceeeCCeEEEEecCCCEEEEEEEe Confidence 99999999999999999999999999999987778999999999999999999999999999999999999999999999 Q ss_pred eeccceeccchhhhhHHhcCCCCEEEEEEecCCCEEEEEEcCCCeEEEEEEecccceEEEEEeccCCceEEEEEEeeCCC Q lcl|Aclame:pro 401 WQANGFVTGDLSLRAAHLFDNLDILDMAYAKAPQPIVWFISSSGKLLGLTYVPEQQIGAWHQHDTDGVFESCAVVAEGNE 480 (681) Q Consensus 401 ~~~~~~~~~dlt~~~~hl~~~~~~~~~~~~~~p~~~~~~~~~dg~l~~~ty~~~q~v~aW~~w~~~g~~~~v~~~~~~~~ 480 (681) +++|+|+++|+|++|+||++++++++|+++++|++++||+++||+|++|+|++||||+|||||+++|+|++||+++++.+ T Consensus 401 ~~~d~~~~~dlt~~a~Hl~~~~~i~~~a~~~~p~~~~~~v~~dg~l~~~ty~~eq~v~aW~~~~~~g~v~~v~~i~~~~~ 480 (681) T protein:vir:10 401 WQANGFVTGDLSLRAAHLFDNLDILDMAYAKAPQPIVWFISSSGKLLGLTYVPEQQIGAWHQHDTDGVFESCAVVAEGNE 480 (681) T ss_pred eecCceeccchhhhhhhhcCCCCeEEEEEecCCCEEEEEEecCCcEEEEEEecccceeeEEEEecCCcEEEEEEecCCCC Confidence 99999999999999999999889999999999999999999999999999999999999999999999999999999999 Q ss_pred CEEEEEEEECCCCceEEEEeeccCccccccccceEeecceeeccCcceeeccCCccCCcEEEEEeCCeeeccEeecCCEE Q lcl|Aclame:pro 481 DRLYAVVRRTIGGNEVRYVERMASRQFDAQADAFFVDSGLTYSGEPVSHISGLEHLEGKTVSILADGAVHPQRVVTDGAI 560 (681) Q Consensus 481 d~l~~~v~r~~~g~~~~~ie~~~~~~~~~~~~~~~lD~~~~y~~~~~~~~~gl~~l~G~~v~v~adG~~~~~~~v~~g~i 560 (681) |+||++|+|+++|+.++|||+|+++.++..++++||||+++|.+.++.+++||+||+|++|.+++||+++++.+|.+|+| T Consensus 481 d~l~~vv~r~~~g~~~~yie~~~~~~~~~~~~~~~vD~~~t~~~~~~~~~sgl~~leG~tv~i~aDG~~~~~~~V~~G~i 560 (681) T protein:vir:10 481 DRLYAVVRRTIGGNEVRYVERMASRQFDAQADAFFVDSGLTYSGEPVSHISGLEHLEGKTVSILADGAVHPQRVVTDGAI 560 (681) T ss_pred cEEEEEEEecCCCCeEEEEEecCCccccccccceEeeccccccCcceeeeccccCCCCcEEEEEeCCeecCcEeecCcEE Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred EeCCCCCeEEEeeecceeEEecceEecCCCcccccceeEEEEEEEEEeccccEEEecCCCeeEEeeeecccccCCcCCcc Q lcl|Aclame:pro 561 DLDVEAGTVHIGLPITAELQTLPVAMQLDGSFGQGRVKNINKLWLRVHRSSGIFAGPHADALTEVKQRTSEPYGSPPALK 640 (681) Q Consensus 561 ~l~~~~~~v~vG~~y~~~v~~~p~~~~~~~~~~~~~~~~i~rv~l~~~~S~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 640 (681) +|+.++++++|||+|+++++++|++++.++++.+++++||+|++||+++|.+++++.+.+.+++++++.++.++.+++++ T Consensus 561 tl~~~~~~v~VGl~Y~s~i~~lp~~~~~~~g~~~g~~~ri~rv~lr~~~S~g~~~~~~~~~l~~~~~~~~~~~g~~~~l~ 640 (681) T protein:vir:10 561 DLDVEAGTVHIGLPITAELQTLPVAMQLDGSFGQGRVKNINKLWLRVHRSSGIFAGPHADALTEVKQRTSEPYGSPPALK 640 (681) T ss_pred EeCcCCceEEEeeeceeEEEecceeeecCCcccCCceEEEEEEEEEEEcccceEEeeCCCceEEEEEeccccccccCCcc Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred cceEEEEecCCcCcceEEEEEECCccCEEEEEEEEEEEEcC Q lcl|Aclame:pro 641 SEEIPLVLSPKWGDSGQLFVRQADPLPLMIVSMSAEIAIGA 681 (681) Q Consensus 641 tG~~~v~~~~~~~~~~~v~I~~~~P~P~tvlai~~ev~vg~ 681 (681) ||++++++.++|+++.+|+|+|++|+||+|+||+|||+||| T Consensus 641 TG~~~v~v~~~~~~~~~v~I~qd~PlP~tvlsi~~ev~vgg 681 (681) T protein:vir:10 641 SEEIPLVLSPKWGDSGQLFVRQADPLPLMIVSMSAEIAIGA 681 (681) T ss_pred CCeEEEEeCCCcCcceEEEEEECCCcCEEEEEeeEEEEeeC Confidence 99999999999999999999999999999999999999999 No 4 >protein:vir:7329 Length: 825 # NCBI annotation: hypothetical protein # Family: family:all:780 # MgeID: mge:143 # MgeName: epsilon15 # Cross-refs: genbank:acc:NP_848220;genbank:gi:30387391;genbank:GeneID:2641863 Probab=100.00 E-value=5.7e-221 Score=1228.02 Aligned_cols=679 Identities=36% Similarity=0.635 Sum_probs=587.6 Q ss_pred CCcceEeecccccccccchhcccchHHHHHHHHhhhhccEEeeccCeeeCCchheeeecCCCcCceEEEEEEeCCCCeEE Q lcl|Aclame:pro 1 MSNVRVLQRSFGGGEISPEMFGRIDDVKYQSGLAICRNFVVKPQGPAENRAGFAFVREVKDSAKKVRLIPFTYSVTQTMV 80 (681) Q Consensus 1 M~~~~~~q~~f~~GElsP~l~~R~D~~~y~~~~~~~~N~~~~~~Gg~~rRpG~~~v~~~~~~~~~~rlipf~~~~~~~y~ 80 (681) |+ ++++|+||++|||||+|++|.||+||++||++|+||+++|+||++|||||+||+.+|++++++|||||+||++|+|+ T Consensus 1 m~-~~~~q~sF~~GElsP~l~gR~Dl~~y~~g~~~~~N~~~~p~Gg~~rRpGt~fva~~~~~~~~~rLipF~fs~~q~y~ 79 (825) T protein:vir:73 1 MA-FSWIQPSFAGGEIGPSLYGRIDMSKYQVALRKCDNFIVRQYGGVENRPGTRFVGPAKYPDRKCRLIPFQFSTVQTYA 79 (825) T ss_pred Cc-cceeccccccceechhhcccchHHHHHHHHHHhcCcEEEecCCceecCchHHhHhhcCCCCCEEEEEEEeCCCcEEE Confidence 98 68999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred EEEcCCEEEEEeCCcEEee-CCEEEEEeCCCCchhhceeeEEEeccEEEEEcCCcceEEEEECCCCcEEEEEEeeccCcc Q lcl|Aclame:pro 81 IELGAGYFRFHTNGGTLLD-GAVPYEIANPYAEADLFNIHYVQSADVLTLVHPNYAPRELRRLGATNWQLATIAFTSPVA 159 (681) Q Consensus 81 lefg~~~irv~~~~~~v~~-~~~~~~i~TPy~~a~l~~l~~~qsaD~l~lvh~~~~p~~l~R~~~~~W~~~~~~f~~~~~ 159 (681) ||||++|||||++++++++ ++.++|++|||++++|++|+|+|+||+|||+|++|||++|.|.++++|+++++.|...|+ T Consensus 80 Lefg~~~lrv~~~gg~v~~~~~~~~e~~TPy~~~~l~~l~~~QsaD~~~i~h~~~pp~~L~r~~~~~W~l~~~~f~~gp~ 159 (825) T protein:vir:73 80 LEFGHNYMRVIKDGAYVLTTSNVIYELAMPYADTDLFRIKFTQSADVLTLVHPAYPPKELRRYAHDNWQIVDVTTKNGPF 159 (825) T ss_pred EEEeCCeEEEEeCCceEeccCCceEEEecccchhhhhhheeeeecCEEEEEcCCCceeEEEEecCCCcEEEEEeccCCcc Confidence 9999999999999998874 678999999999999999999999999999999999999999999999999999999999 Q ss_pred cccccceeee----cCcceeeEEEEEEEE--EeccceEEecCc-------cccee-----------ccce---eccce-- Q lcl|Aclame:pro 160 TPTSVTATSN----NKGTDYTYRYVVTAL--DAEGKTESAPSS-------AGTCT-----------NNLF---TNGGA-- 210 (681) Q Consensus 160 ~~~~~t~t~~----~~~~~~t~~~~v~a~--~~~g~~~s~~s~-------~~t~~-----------~~~~---~~~~~-- 210 (681) .+.+...+.. +....++.......+ +..+........ +.... ...+ ..+.. T Consensus 160 ~~in~~~sv~v~asg~tg~~TiTaS~a~~~~~~vG~~i~~~~~~v~si~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~t 239 (825) T protein:vir:73 160 EDINVDETVKVYASASTGTITLTASSAIFGAEQVGKLFYLEQPAVDSVPVWETSKTTAINDVRRADSNYYRANTSGKTGT 239 (825) T ss_pred ccccccccceeeecccCceeEEEeeccccCchhcCeEEEEecccccccceeeeeeEEEeeeEEECCCceeeeecccccce Confidence 9887653322 122222222111110 111111111000 00000 0000 00111 Q ss_pred ------eeeEEeeccCC------ceeeeecccceeEEEee---c-----cceeEEEeccccccccccccccccCccccCC Q lcl|Aclame:pro 211 ------NTIAWSASSGA------SRYNVYKEQGGLYGYIG---Q-----TTGTSLVDDNIAPDLSVTPPIYDAVFNAAGD 270 (681) Q Consensus 211 ------~~~~w~a~~~~------~~~~v~~~~~~~~~~~~---~-----~~~t~~~~~~~~~~~~~~~~~~~~~~s~~~g 270 (681) ....|.++.+. ..+...+...+...+.+ . +....+.......+...+++|.++.|+..+| T Consensus 240 ~~~~a~~g~~~~~~~g~~~~~~~~~~~~~~~~~g~~~it~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~~g 319 (825) T protein:vir:73 240 LRPSHTEGMSWDGWGGTGSDDTGIQWEYLHSGFGIAKITAVAGDGLTATADVVSFIPSQVVGSANASYKWAKYAWNSVNG 319 (825) T ss_pred eeccccCCceeEeeeeecccCCceEEEEEecCCceEEEeeccccceeeccccceecccccccCCCCCcccccCCcccCCC Confidence 11223332221 12222222333332221 1 1112222333344556778999999999999 Q ss_pred ceeEEEEEcCeEEEEecCCCccEEEEEeccChhcccccCCCcCCccEEEEEcCCCceEEEEEeecCcEEEEecCcEEEEe Q lcl|Aclame:pro 271 YPAAVSYFEQRRCFAGTTNKPQNIWMTRSGTESAMSYSLPVRDDDRVAFRVAAREANAIRHIVPLTELLLLTSSGEWRVA 350 (681) Q Consensus 271 ~p~~v~f~~~RL~~~~~~~~p~~v~~S~~gd~~nF~~~~~~~D~D~i~~~~~~~~~~~i~~~~~~~~Llv~t~~~e~~~~ 350 (681) ||++|+||||||+|+|++.+||+|||||+||||||+++++++|||||+++++++|+|.|+|++++++|++||+++||+|+ T Consensus 320 yPs~v~f~q~RL~f~g~~~~p~~v~~Srtgd~~nF~~~~~~~DdD~I~~~~s~~~~~~i~~~~~~~~L~~~t~~~e~~l~ 399 (825) T protein:vir:73 320 YPSTVVYYQQRLYFAASTAYPQTIWASRTGDYKDFGKNNPIQDDDRIIYTYAGRQVNEIRHLIDVGNLVALTSGGEYTIS 399 (825) T ss_pred CccEEEEEcceEEEeecCCCCCEEEEEccCCccccccCCCCCCCccEEEEEcCCcceeEEEEeecCcEEEEecCceEEEe Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred cCCCcccccceeEEEEeeccCCcccccEEeCCeEEEEEcCCCEEEEEEEeeeccceeccchhhhhHHhcCCCCEEEEEEe Q lcl|Aclame:pro 351 SVNSDAVTPTTISVRPQSYVGATDVQPVVVNNTTIYGAARGGHVRELAYNWQANGFVTGDLSLRAAHLFDNLDILDMAYA 430 (681) Q Consensus 351 ~~~~~~ltP~~~~~~~~s~~g~~~~~Pv~vg~~v~fv~~~g~~vre~~~~~~~~~~~~~dlt~~~~hl~~~~~~~~~~~~ 430 (681) ++++++|||+|++++++|+|||++++|+.+|++++|+|++|++||||+|++++|+|+++|+|+|++||++++++++|+|+ T Consensus 400 ~~~~~~lTP~~~~~~~~s~~g~~~~~Pv~vg~~~~Fv~~~g~~vre~~~~~~~d~~~~~dlt~~a~hl~~~~~~~~~a~~ 479 (825) T protein:vir:73 400 GDQNKVLTPSAFSFSSQGNNGSSNVPPIAVANIALFIQEKGSVVRDLAYSFDVDGYQGTDLTILANHLFQKHSIVDWSFC 479 (825) T ss_pred cCCCcccceeeEEEEeeeeeccccccceEeCCeEEEEeCCCCeEEEEEEeeecCceeccchhhhhHhhccCCceEEEEEc Confidence 87778999999999999999999999999999999999999999999999999999999999999999998899999999 Q ss_pred cCCCEEEEEEcCCCeEEEEEEecccceEEEEEeccCCceEEEEEEeeCCCCEEEEEEEECCCCceEEEEeeccCcccccc Q lcl|Aclame:pro 431 KAPQPIVWFISSSGKLLGLTYVPEQQIGAWHQHDTDGVFESCAVVAEGNEDRLYAVVRRTIGGNEVRYVERMASRQFDAQ 510 (681) Q Consensus 431 ~~p~~~~~~~~~dg~l~~~ty~~~q~v~aW~~w~~~g~~~~v~~~~~~~~d~l~~~v~r~~~g~~~~~ie~~~~~~~~~~ 510 (681) ++|++++||+++||+|++|+|+++|+|.|||||+++|+|+++|+++++++|+||++|+|+++|+.++|+|+|++..+.+. T Consensus 480 ~~p~~~~~~v~~dg~l~~~ty~~~q~v~aW~~~~~~g~v~~~~~i~~~~~D~l~~iV~R~~~g~~~~yiE~~~~~~~~~~ 559 (825) T protein:vir:73 480 IVPYSSAFCIRDDGKLLVLTYLRDQQVFAWAPQSSAGKYESTCSISEGSEDAVYFVVNRTINGQTVRYIERLSSRLFTND 559 (825) T ss_pred CCCceEEEEEecCCeEEEEEEeccccceeeEEEecCCcEEEEEEecCCCccEEEEEEEEeeCCceEEEEEEecccccCCC Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999998888 Q ss_pred ccceEeecceeeccCc---------------------------------------------------------------- Q lcl|Aclame:pro 511 ADAFFVDSGLTYSGEP---------------------------------------------------------------- 526 (681) Q Consensus 511 ~~~~~lD~~~~y~~~~---------------------------------------------------------------- 526 (681) ++++||||+++|++.+ T Consensus 560 ~~~~~vD~g~~~~g~~~~~~l~~l~g~tv~~~~~g~~~~~v~~g~itl~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~i~ 639 (825) T protein:vir:73 560 EDAFFVDCGLSYDGRNTSSRTMTISGGTGDWSYQVDYPVTVSGGAYFVNTDVGAQIQFPYTGTDPDTNEPVAKELRGDII 639 (825) T ss_pred cceeEEEEEeeecccceeeceeeeCCceEEEEeCCeEEEEEcCCeEEecccceEEEEecccCcccccccceeceeeEEEc Confidence 8999999987765311 Q ss_pred -------------------------------ceeeccCCccCCcEEEEEeCCeeeccEeecCCEEEeCCCCCeEEEeeec Q lcl|Aclame:pro 527 -------------------------------VSHISGLEHLEGKTVSILADGAVHPQRVVTDGAIDLDVEAGTVHIGLPI 575 (681) Q Consensus 527 -------------------------------~~~~~gl~~l~G~~v~v~adG~~~~~~~v~~g~i~l~~~~~~v~vG~~y 575 (681) ..+++||+||||++|.|++||+++++.+|++|.|+|+.+++.+||||+| T Consensus 640 ~~~~~~~v~v~~~~~~~a~~~~~~~t~~~~a~~~~~gL~hLeG~~v~v~~Dg~~~~~~~V~~G~vtl~~~~~~v~vGl~y 719 (825) T protein:vir:73 640 SVTSNTAVVVRFNRNVPPVLRNVATTNWQMARQTFSGLAHLEGQTVNILSDASVEPQKTVTGGAVTLESPGAVVHIGLPI 719 (825) T ss_pred cccCceEEEEEecccccceeeeecccCCCcchheeccccccCCceEEEEECCeeeCCeEecCcEEEecCCceEEEEeeCc Confidence 1134899999999999999999999999999999999999999999999 Q ss_pred ceeEEecceEecCCCcccccceeEEEEEEEEEeccccEEEecCCCeeEEeeeecccccCCcCCcccceEEEEecCCcCcc Q lcl|Aclame:pro 576 TAELQTLPVAMQLDGSFGQGRVKNINKLWLRVHRSSGIFAGPHADALTEVKQRTSEPYGSPPALKSEEIPLVLSPKWGDS 655 (681) Q Consensus 576 ~~~v~~~p~~~~~~~~~~~~~~~~i~rv~l~~~~S~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~tG~~~v~~~~~~~~~ 655 (681) ++++++||+++..+ |+.++++|||+++.+||++|.+++++.+...++++++|..+.++.++++|||++++++.++|+++ T Consensus 720 ~~~~~~l~~~~~~~-g~~~g~~~ri~~~~~~~~~s~~~~~g~~~~~l~~~~~r~~~~~~~~~~~~tG~~~~~~~~~~~~~ 798 (825) T protein:vir:73 720 TAEFETLDININGQ-ETLLDKKQVIPTVTMVVNASRGIWATTPGGTWYEYPQREFEFYDDPVDDATGKVEVKLDSNWDKN 798 (825) T ss_pred cceEEecccccCCC-ccccCccEEEEEEEEEEEeeeeEEEecCCCcceEeeccCCCcccCCCccccCcEEEecCCCCCCc Confidence 99999999999865 99999999999999999999999999999999999999989999999999999999999999999 Q ss_pred eEEEEEECCccCEEEEEEEEEEEEcC Q lcl|Aclame:pro 656 GQLFVRQADPLPLMIVSMSAEIAIGA 681 (681) Q Consensus 656 ~~v~I~~~~P~P~tvlai~~ev~vg~ 681 (681) .+|+|+|+.|||||||||..||+||| T Consensus 799 ~~~~i~q~~PlP~tvlav~~~~~~~g 824 (825) T protein:vir:73 799 GRVKVRQLDPLPLSVLAVLPRLTVGG 824 (825) T ss_pred cEEEEEEcCCCCEEEEEEEEEEEecC Confidence 99999999999999999999999999 No 5 >protein:vir:95324 Length: 823 # NCBI annotation: hypothetical protein # Family: family:all:780 # MgeID: mge:1564 # MgeName: phiV10 # Cross-refs: genbank:acc:YP_512269;genbank:gi:89152436;genbank:GeneID:3952993 Probab=100.00 E-value=1.5e-215 Score=1198.26 Aligned_cols=679 Identities=36% Similarity=0.632 Sum_probs=591.7 Q ss_pred CCcceEeecccccccccchhcccchHHHHHHHHhhhhccEEeeccCeeeCCchheeeecCCCcCceEEEEEEeCCCCeEE Q lcl|Aclame:pro 1 MSNVRVLQRSFGGGEISPEMFGRIDDVKYQSGLAICRNFVVKPQGPAENRAGFAFVREVKDSAKKVRLIPFTYSVTQTMV 80 (681) Q Consensus 1 M~~~~~~q~~f~~GElsP~l~~R~D~~~y~~~~~~~~N~~~~~~Gg~~rRpG~~~v~~~~~~~~~~rlipf~~~~~~~y~ 80 (681) |+ ++++|+||++|||||+|++|.||+||++||++|+||+++|+||++|||||+||++++++++++|||||+|+++|+|+ T Consensus 1 m~-i~~~q~sF~~GElsP~l~gR~Dl~ry~~q~~~~~N~~~~~~GGl~rRpGt~fva~~~~~~g~~rLipf~~s~~q~y~ 79 (823) T protein:vir:95 1 MA-ISWIQPSFAGGEIGPSLYGRIDMAKYQVALRKCDNFIVRQYGGVENRPGTRFVGAAKYPNRKCRLIPFQFSTVQTYA 79 (823) T ss_pred Cc-ceeechhccCceechheeccchHHHHHHHHhhhhCcEeeecCCceecCchhhhhhhcCCCCCeeEEEEEeCCCcEEE Confidence 99 89999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred EEEcCCEEEEEeCCcEEee-CCEEEEEeCCCCchhhceeeEEEeccEEEEEcCCcceEEEEECCCCcEEEEEEeeccCcc Q lcl|Aclame:pro 81 IELGAGYFRFHTNGGTLLD-GAVPYEIANPYAEADLFNIHYVQSADVLTLVHPNYAPRELRRLGATNWQLATIAFTSPVA 159 (681) Q Consensus 81 lefg~~~irv~~~~~~v~~-~~~~~~i~TPy~~a~l~~l~~~qsaD~l~lvh~~~~p~~l~R~~~~~W~~~~~~f~~~~~ 159 (681) |||++++||||++++++++ ++.+++++|||+++++++|+|+|+||+|||+|++|||++|.|+++++|+++++.|..+|+ T Consensus 80 Lefg~~~irV~~~~g~vv~~~~~~~ev~tPy~~~~l~~Lr~~qsaD~~fivh~~~~p~~L~r~~~~~w~l~~~~~~~gp~ 159 (823) T protein:vir:95 80 LEFGHQYMRVIKDGALVLNSSNVIYEIATPYTEADLFRIKFTQSADVLTLVHPAYPPKELRRYAHDNWQLVDVVTKNGPF 159 (823) T ss_pred EEEcCCeEEEEeCCcEEEecCCceeEEecccccccccceeEEEeccEEEEEcCCccceEEEecCCCCceEEEEEEecccc Confidence 9999999999999999885 568999999999999999999999999999999999999999999999999999999998 Q ss_pred cccccceeeecC----cceeeEEEE--EEEEEeccceEE------------------ecCcccceecccee---ccceee Q lcl|Aclame:pro 160 TPTSVTATSNNK----GTDYTYRYV--VTALDAEGKTES------------------APSSAGTCTNNLFT---NGGANT 212 (681) Q Consensus 160 ~~~~~t~t~~~~----~~~~t~~~~--v~a~~~~g~~~s------------------~~s~~~t~~~~~~~---~~~~~~ 212 (681) ...+.+.+.... ...++.... ....+..+.... ..+.......+.+. .+..++ T Consensus 160 ~~~~~~~t~~v~~~~~~~~~t~ta~~~~~~~d~vg~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 239 (823) T protein:vir:95 160 EDINIDESLTVYASASTGTITLTASASIFGAEQVGKLFYLEQPAVDSVPVWETSKSTSIGDIRRADSNYYRAVTAGKTGT 239 (823) T ss_pred ccccccceeEEeccccCceeEEeecccccchhhccceEEEeccccceeeecceeeeecccceEEecccceeeeeccccce Confidence 887754332221 111111110 000011111000 00111111111110 000111 Q ss_pred --------eEEeec------cCCceeeeecccceeEEEe------eccceeEEEeccccccccccccccccCccccCCce Q lcl|Aclame:pro 213 --------IAWSAS------SGASRYNVYKEQGGLYGYI------GQTTGTSLVDDNIAPDLSVTPPIYDAVFNAAGDYP 272 (681) Q Consensus 213 --------~~w~a~------~~~~~~~v~~~~~~~~~~~------~~~~~t~~~~~~~~~~~~~~~~~~~~~~s~~~g~p 272 (681) ..|... +....+..++...+++... ......++....+.++..++.+|...+|+..+||| T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~v~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~~g~P 319 (823) T protein:vir:95 240 LRPSHTEGTSWDGWGGSGDDDTGIEWEYLHSGFGIARITAVNGTTATAEVISYIPSQVVGEDNASYKWAKYAWNSVNGYP 319 (823) T ss_pred eecccCCcceEEeceecccccceeEEEEEeCCcceEEEEeecceeeeceEeeeeccccccCCcCCccccccccCcCCCCc Confidence 112211 1122334444444444332 22333344455566677788999999999999999 Q ss_pred eEEEEEcCeEEEEecCCCccEEEEEeccChhcccccCCCcCCccEEEEEcCCCceEEEEEeecCcEEEEecCcEEEEecC Q lcl|Aclame:pro 273 AAVSYFEQRRCFAGTTNKPQNIWMTRSGTESAMSYSLPVRDDDRVAFRVAAREANAIRHIVPLTELLLLTSSGEWRVASV 352 (681) Q Consensus 273 ~~v~f~~~RL~~~~~~~~p~~v~~S~~gd~~nF~~~~~~~D~D~i~~~~~~~~~~~i~~~~~~~~Llv~t~~~e~~~~~~ 352 (681) ++|+||||||+|+|++.+||+|||||+||||||+++++++|||||+++++++++|.|+|++++++|++||+++||+|+++ T Consensus 320 s~v~f~q~RL~f~g~~~~p~~v~~Srtgd~~nF~~~~~~~DdD~I~~~~s~~~~~~i~~~v~~~~Lli~t~~~e~~l~~~ 399 (823) T protein:vir:95 320 GTVVYYQQRLYFAASTAFPQTIWASRTGDYKDFGKSNPTQDDDRIIYTYAGRQVNEIRHLIDVGSLVALTSGGEYVITGD 399 (823) T ss_pred cEEEEEeceEEEEEcCCCCcEEEEeccCCccccccccCCCCCCcEEEEEcCCcceEEEEEeecCcEEEEecCcEEEEEcC Confidence 99999999999999999999999999999999999998999999999999999999999999999999999999999987 Q ss_pred CCcccccceeEEEEeeccCCcccccEEeCCeEEEEEcCCCEEEEEEEeeeccceeccchhhhhHHhcCCCCEEEEEEecC Q lcl|Aclame:pro 353 NSDAVTPTTISVRPQSYVGATDVQPVVVNNTTIYGAARGGHVRELAYNWQANGFVTGDLSLRAAHLFDNLDILDMAYAKA 432 (681) Q Consensus 353 ~~~~ltP~~~~~~~~s~~g~~~~~Pv~vg~~v~fv~~~g~~vre~~~~~~~~~~~~~dlt~~~~hl~~~~~~~~~~~~~~ 432 (681) ++++|||+|++++++|+|||++|+|+.+|+.++|+|++|++||||+|++++|+|+++|+|+|++||++++++++|+|+++ T Consensus 400 ~~~~lTP~~~~~~~~s~~g~~~~~Pv~vg~~~~Fv~~~g~~vre~~~~~~~d~~~~~dlT~~a~hl~~~~~i~~~a~~~~ 479 (823) T protein:vir:95 400 QNKVLTPSSFAFSSQGSNGSSNVPPIAVANIALFVQEKGSVVRDLAYSFDVDGYQGNDLTILANHLFQKHSIVDWCFSIV 479 (823) T ss_pred CCcccceeeEEEEEeeccccccccceEeCCeEEEEecCCCEEEEEEEeeecCceecchhhhhhhhhcCCCceEEEEEecC Confidence 77899999999999999999999999999999999999999999999999999999999999999999889999999999 Q ss_pred CCEEEEEEcCCCeEEEEEEecccceEEEEEeccCCceEEEEEEeeCCCCEEEEEEEECCCCceEEEEeeccCcccccccc Q lcl|Aclame:pro 433 PQPIVWFISSSGKLLGLTYVPEQQIGAWHQHDTDGVFESCAVVAEGNEDRLYAVVRRTIGGNEVRYVERMASRQFDAQAD 512 (681) Q Consensus 433 p~~~~~~~~~dg~l~~~ty~~~q~v~aW~~w~~~g~~~~v~~~~~~~~d~l~~~v~r~~~g~~~~~ie~~~~~~~~~~~~ 512 (681) |++++||+++||+|++|+|+++|||.|||||+++|+|++||+++++.+|+||++|+|++||+.++|||+|+++.+...++ T Consensus 480 p~~~~~~v~~dG~l~~~ty~~~q~v~aW~~~~~~g~~~~~~~i~~~~~d~l~~~v~R~i~g~~~~yiE~~~~~~~~~~~~ 559 (823) T protein:vir:95 480 PYSSAFCIRDDGKLLVMTYLRDQQVFAWAPQSSTGKYESTCSISEGNEDAVYFVVNRTVNGQTVRYIERLSSRLFTSDED 559 (823) T ss_pred CCeEEEEEecCCcEEEEEEecccceeeeEEEecCCcEEEEEEecCCCCCEEEEEEEeccCCeEEEEEEeeccccCCCccc Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999888889 Q ss_pred ceEeecceeeccCc------------------------------------------------------------------ Q lcl|Aclame:pro 513 AFFVDSGLTYSGEP------------------------------------------------------------------ 526 (681) Q Consensus 513 ~~~lD~~~~y~~~~------------------------------------------------------------------ 526 (681) ++||||+++|++.+ T Consensus 560 ~~~lD~~~s~~g~~~~~~~~~l~~g~~~l~~l~g~~v~~adg~~~~~~~v~g~i~l~~~~~~~~vGl~~~~~i~~~~~~v 639 (823) T protein:vir:95 560 AFFVDSGLSYDGRNTSDRTMTITGGSGEWDYLAEYTISVSGGAYFTSSDVGAQLQFPYTGADPDTGYEVSKELRCDIISV 639 (823) T ss_pred eeEEEEEEEeecCcccceeeEecCCCCcccccCceEEEecCcceECCccceeEEEeCcCCCccccccceEEEEEEeecee Confidence 99999998774311 Q ss_pred -----------------------------ceeeccCCccCCcEEEEEeCCeeeccEeecCCEEEeCCCCCeEEEeeecce Q lcl|Aclame:pro 527 -----------------------------VSHISGLEHLEGKTVSILADGAVHPQRVVTDGAIDLDVEAGTVHIGLPITA 577 (681) Q Consensus 527 -----------------------------~~~~~gl~~l~G~~v~v~adG~~~~~~~v~~g~i~l~~~~~~v~vG~~y~~ 577 (681) .++++||+||||++|.|++||++++..+|.+|.|+|+.+++.++|||+|++ T Consensus 640 ~~~~a~~~~~~r~v~a~l~~~~t~~~~~~~~~~~gL~hleg~tv~v~~dg~~~~~~~v~~G~vtl~~~~~~v~vGl~~~~ 719 (823) T protein:vir:95 640 TSNTAVVVRANRNVPPSLRNVATTNWQMARRTFGGLSHLEGQTVNILSDANVEPQKVVSGGAVTLESPGAVVHIGLPITA 719 (823) T ss_pred eCCceEEEccCCcccceeeeeeccccccccceeeeccccccceEEEEEcCeeeCCeEecCCEEEecCCCCEEEEeeccee Confidence 113578999999999999999999999999999999999999999999999 Q ss_pred eEEecceEecCCCcccccceeEEEEEEEEEeccccEEEecCCCeeEEeeeecccccCCcCCcccceEEEEecCCcCcceE Q lcl|Aclame:pro 578 ELQTLPVAMQLDGSFGQGRVKNINKLWLRVHRSSGIFAGPHADALTEVKQRTSEPYGSPPALKSEEIPLVLSPKWGDSGQ 657 (681) Q Consensus 578 ~v~~~p~~~~~~~~~~~~~~~~i~rv~l~~~~S~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~tG~~~v~~~~~~~~~~~ 657 (681) ++++||+++..+ |+.++++|||+++.+||++|.+++++.+..+++++++|..+.++.++++|||++++.+.++|+++.+ T Consensus 720 ~~~~l~~~~~~~-g~~~g~~~ri~~~~~~~~~s~~~~~g~~~~~l~~~~~r~~~~~~~~~~~~tG~~~~~~~~~~~~~~~ 798 (823) T protein:vir:95 720 EFETLDININGQ-ETLLDKKQVIPSVTLVVNASRGIWATTPGGKWYEYPQREFEFYDDPVDDATGKVEVKLDSNWGKNGR 798 (823) T ss_pred eEEecchhcCCC-cccCCceeEEeEEEEEEEeeeeEEEecCCCceeEeeccCCCcccCCCCcccceEEEecCCCcCCccE Confidence 999999999875 8899999999999999999999999999999999999998999999999999999999999999999 Q ss_pred EEEEECCccCEEEEEEEEEEEEcC Q lcl|Aclame:pro 658 LFVRQADPLPLMIVSMSAEIAIGA 681 (681) Q Consensus 658 v~I~~~~P~P~tvlai~~ev~vg~ 681 (681) |+|+|+.|||||||||..||+||| T Consensus 799 ~~i~q~~plp~tvl~v~~~~~~~g 822 (823) T protein:vir:95 799 VKIRQLDPLPLSVLAVIPRLTVGG 822 (823) T ss_pred EEEEEcCCCceEEEEEEEEEEecC Confidence 999999999999999999999999 No 6 >protein:vir:103790 Length: 768 # NCBI annotation: hypothetical protein # Family: family:all:780 # MgeID: mge:1645 # MgeName: BcepC6B # Cross-refs: genbank:acc:YP_024932;genbank:gi:48697202;genbank:GeneID:2846114 Probab=100.00 E-value=3.9e-204 Score=1135.73 Aligned_cols=677 Identities=29% Similarity=0.465 Sum_probs=572.7 Q ss_pred CCcceEeecccccccccchhcccchHHHHHHHHhhhhccEEeeccCeeeCCchheeeecCCCcCceEEEEEEeCCCCeEE Q lcl|Aclame:pro 1 MSNVRVLQRSFGGGEISPEMFGRIDDVKYQSGLAICRNFVVKPQGPAENRAGFAFVREVKDSAKKVRLIPFTYSVTQTMV 80 (681) Q Consensus 1 M~~~~~~q~~f~~GElsP~l~~R~D~~~y~~~~~~~~N~~~~~~Gg~~rRpG~~~v~~~~~~~~~~rlipf~~~~~~~y~ 80 (681) |||++++|+||++|||||+|++|.||+||++||++|+||+++|+||++|||||+||+++++.++++|||||+|+++|+|+ T Consensus 1 M~~~~~~~~~F~~GelsP~l~~r~Dl~ry~~~~~~~~N~~~~~~gGl~rRpGt~fv~~~~~~~~~~~lipf~~~~~~~y~ 80 (768) T protein:vir:10 1 MPKAAPQQVSFDAGELSPLLGARVDLAKYPNGCQVMENFIATVQGPAIRRGGKRFVAATKDSTKQSWLLPFIVADGIAYM 80 (768) T ss_pred CCcceeeeeeccCceechhhcccchHHHHHHHHhhhhcceeeecCCceecCchhhhhhhcCCCCCeeEEEEEecCccEEE Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred EEEcCCEEEEEeCCcEEeeCCEEEEEeCCCCchhhc------eeeEEEeccEEEEEcCCcceEEEEECCCCcEEEEEEee Q lcl|Aclame:pro 81 IELGAGYFRFHTNGGTLLDGAVPYEIANPYAEADLF------NIHYVQSADVLTLVHPNYAPRELRRLGATNWQLATIAF 154 (681) Q Consensus 81 lefg~~~irv~~~~~~v~~~~~~~~i~TPy~~a~l~------~l~~~qsaD~l~lvh~~~~p~~l~R~~~~~W~~~~~~f 154 (681) ||||+++||||+++|.++.++.++|++|||++++|. +|+|+|+||+|||+|++|||++|.|+++++|+++.+.| T Consensus 81 l~fg~~~irv~~~~g~v~~~~~~~e~~tp~~~~~l~~~~~~~~L~~~q~aD~~~i~~~~~~p~~l~r~~~~~w~l~~~~~ 160 (768) T protein:vir:10 81 LEFGDHYIRFFVNRGQLVNAGAPVEIATPYALADLTTEDGTFAIRATQSADTMYLFHGGYPTQKLLRTSATTFSLQPVTF 160 (768) T ss_pred EEEcCCEEEEEECCcEEEecCeeEEEEcCCCcceeecccccceeEEEeecCEEEEEcCCcceeEEEEecCCCceeEEeee Confidence 999999999999999999999999999999999984 59999999999999999999999999999999999999 Q ss_pred ccCcccccccceee--ecCcceeeEEEEEE----EEEeccceEEec-------Ccc---------------cceecccee Q lcl|Aclame:pro 155 TSPVATPTSVTATS--NNKGTDYTYRYVVT----ALDAEGKTESAP-------SSA---------------GTCTNNLFT 206 (681) Q Consensus 155 ~~~~~~~~~~t~t~--~~~~~~~t~~~~v~----a~~~~g~~~s~~-------s~~---------------~t~~~~~~~ 206 (681) ..+|+.+.+...+. ...+......+... .....+...... ..+ ......... T Consensus 161 ~~gp~~~~n~~~~vti~~s~~~~~~T~tasa~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 240 (768) T protein:vir:10 161 VGGPFAAVNSDNNVRVHASAGTGAVTLVASASVFRPSDVGTLFYLEQEDNSFVKPWVVHQKIGPSELRRVGDRVYLCTAV 240 (768) T ss_pred cCccccccccceeEEEEecccceeEEEeecCCccchhhcceeeeeeeeccccccccEEEEeeeeEEEEecCCceEEeeee Confidence 99999887654332 11111111111100 000001000000 000 000000000 Q ss_pred ccce--eeeEEee---------------------ccCCceeeee---cccceeEEEeeccceeEEEecc----------c Q lcl|Aclame:pro 207 NGGA--NTIAWSA---------------------SSGASRYNVY---KEQGGLYGYIGQTTGTSLVDDN----------I 250 (681) Q Consensus 207 ~~~~--~~~~w~a---------------------~~~~~~~~v~---~~~~~~~~~~~~~~~t~~~~~~----------~ 250 (681) .... .+.++.+ .+.+..++.. .+...++++.+.+...+.+... . T Consensus 241 ~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~t~~~~~~~~~~~~~~~~~~~~ 320 (768) T protein:vir:10 241 GTATPQVTGTETPTHTSGSRWDGTGQDESATDEYGSIGAEWEYQHSGYGTVLITGYTNDQVVTGTVATNDPADPGMLPNT 320 (768) T ss_pred ccccccccceeccccccCceEEEecCcccccccccccceEEEEEEcCCceEEEEEecCCeeEEeeeeeecCccccccccc Confidence 0000 0001111 0111111111 1222233444444333332221 1 Q ss_pred cccccccccccccCccccCCceeEEEEEcCeEEEEecCCCccEEEEEeccChhcccccCC--CcCCccEEEEEcCCCceE Q lcl|Aclame:pro 251 APDLSVTPPIYDAVFNAAGDYPAAVSYFEQRRCFAGTTNKPQNIWMTRSGTESAMSYSLP--VRDDDRVAFRVAAREANA 328 (681) Q Consensus 251 ~~~~~~~~~~~~~~~s~~~g~p~~v~f~~~RL~~~~~~~~p~~v~~S~~gd~~nF~~~~~--~~D~D~i~~~~~~~~~~~ 328 (681) .....++++|....|+..+|||++|+||||||+|+| ||+|||||+||||||+++++ +.|||||+++++++++++ T Consensus 321 ~~~~~~t~~~~~~~~~~~~g~Ps~v~f~q~RL~f~~----~~~v~~Srtgd~~nF~~~s~~~~~DdD~I~~~~ss~~~~~ 396 (768) T protein:vir:10 321 VVTLTGTYKWARSLFNSTDGFPQMGTFWRNRLCLMR----DRWLAMSVSADFETFKTKDADQQTDDSAIVQQLNARQLNK 396 (768) T ss_pred ccccCCCcccccCCCcCCCCCceEEEEEeeeEEEee----CCEEEEEcccccccccccccccccCCccEEEEecCCccee Confidence 233456788999999999999999999999999996 79999999999999999875 459999999999999999 Q ss_pred EEEEeecCcEEEEecCcEEEEecCC-CcccccceeEEEEeeccCCcccccEEeCCeEEEEEcCCCEEEEEEEeeecccee Q lcl|Aclame:pro 329 IRHIVPLTELLLLTSSGEWRVASVN-SDAVTPTTISVRPQSYVGATDVQPVVVNNTTIYGAARGGHVRELAYNWQANGFV 407 (681) Q Consensus 329 i~~~~~~~~Llv~t~~~e~~~~~~~-~~~ltP~~~~~~~~s~~g~~~~~Pv~vg~~v~fv~~~g~~vre~~~~~~~~~~~ 407 (681) |+|++++++|+|||+++||+|++.+ +++|||+|++++++|.|||++++|+.+|++++|+|++|++||||+|++++|+|+ T Consensus 397 i~~~v~~~~L~i~T~~~q~~l~~~~~~~~lTP~~~~i~~~s~~g~~~~~Pv~vG~~v~fv~~~g~~vre~~y~~~~d~y~ 476 (768) T protein:vir:10 397 LAWMVESDSLLIGMTGDEWVIGPANASQPVSAANLNAARRTSYGSKRIQPVQVGGTIMFVQKAGRKLRDFKYDFSSDNYV 476 (768) T ss_pred EEEEeecCcEEEEecCceEEEecCCCCcccccceEEEEEeehhcccccccEEeCCeEEEEcCCCCEEEEEEeeeecCcee Confidence 9999999999999999999999854 679999999999999999999999999999999999999999999999999999 Q ss_pred ccchhhhhHHhcCCC-----CEEEEEEecCCCEEEEEEcCCCeEEEEEEecc---cceEEEEEecc-CCceEEEEEEeeC Q lcl|Aclame:pro 408 TGDLSLRAAHLFDNL-----DILDMAYAKAPQPIVWFISSSGKLLGLTYVPE---QQIGAWHQHDT-DGVFESCAVVAEG 478 (681) Q Consensus 408 ~~dlt~~~~hl~~~~-----~~~~~~~~~~p~~~~~~~~~dg~l~~~ty~~~---q~v~aW~~w~~-~g~~~~v~~~~~~ 478 (681) ++|+|+|++||++++ ++++|+++++|++++||+++||+|++|+|++| |+|+|||||++ +|.|++||++++. T Consensus 477 a~DlT~~a~hl~~~~~~~~~~i~~~a~~~~p~~v~~~v~~dg~l~~~ty~~e~~~q~v~aW~~~~~~~g~v~~v~~i~~~ 556 (768) T protein:vir:10 477 STDVTKIADHITRGRAGTNSGIMSLCFQQEPHSVVWAARADGQLIGCTYDEEAGRSDVYGWHRHPDANGFVECVASMPAP 556 (768) T ss_pred cchhhhhhhhhccccCccccceeeEEEeecCCeEEEEEecCCeEEEEEEecCCCceeEEeEEEEEcCCCEEEEEEEEecC Confidence 999999999999975 48999999999999999999999999999998 78899999975 8999999999864 Q ss_pred --CCCEEEEEEEECCCCceEEEEeeccCcc--ccccccceEeecceeeccCcceeeccCCccCCcEEEEEeCCeeeccEe Q lcl|Aclame:pro 479 --NEDRLYAVVRRTIGGNEVRYVERMASRQ--FDAQADAFFVDSGLTYSGEPVSHISGLEHLEGKTVSILADGAVHPQRV 554 (681) Q Consensus 479 --~~d~l~~~v~r~~~g~~~~~ie~~~~~~--~~~~~~~~~lD~~~~y~~~~~~~~~gl~~l~G~~v~v~adG~~~~~~~ 554 (681) .+|.||++|+|+++|+.++|+|+|++.. +....+++||||+++|++.++.+++|++||+|+++.+++||+++++.+ T Consensus 557 ~g~~d~l~~~v~r~~~g~~~~~ie~l~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~gl~~leg~~v~v~~dG~~~~~~~ 636 (768) T protein:vir:10 557 DGASDDLWVIVRRQVNGQTVRYVEYLNPALQDDEPQSSAFYVDAGITYNGVPTSTIAGLGHLEGVTVAVLTDGAVHPSRT 636 (768) T ss_pred CCCccEEEEEEEecCCCeEEEEEEecCcccccccccccceEeccccccCCcceeeecCCCCcccceEEEEECCEeccCce Confidence 4799999999999999999999999743 445678899999999999999999999999999999999999999999 Q ss_pred ecCCEEEeCCCCCeEEEeeecceeEEecceEecCCCcccccceeEEEEEEEEEeccccEEEecCCC--eeEEeeee-ccc Q lcl|Aclame:pro 555 VTDGAIDLDVEAGTVHIGLPITAELQTLPVAMQLDGSFGQGRVKNINKLWLRVHRSSGIFAGPHAD--ALTEVKQR-TSE 631 (681) Q Consensus 555 v~~g~i~l~~~~~~v~vG~~y~~~v~~~p~~~~~~~~~~~~~~~~i~rv~l~~~~S~~~~v~~~~~--~~~~~~~~-~~~ 631 (681) |.+|.|+|+.++++|+||++|+++++++||+++.++|+.+++++||+|++|++++|++++++...+ .+.++..| .++ T Consensus 637 v~~g~itl~~~~~~v~vG~~y~s~~~~~p~~~~~~~gs~~~~~~ri~r~~v~~~~S~~~~~~~~~~~~~~~~~~~r~~~~ 716 (768) T protein:vir:10 637 VTAGAITLDWSASIVHIGVPTTCRIQTMQLNAGAANGTAQGKTKRVTNIATRFSRSLGGVVGPTFDDNDLEQLSFRKPSN 716 (768) T ss_pred ecCCEEEeCCCCceEEEeEeeeEEEEecceEeecCCccccccceEEEEEEEEEecccceEEEecCCCCCceeeeeEecCc Confidence 999999999999999999999999999999999999999999999999999999999999986544 45667655 456 Q ss_pred ccCCcCCcccceEEEEecCCcCcceEEEEEECCccCEEEEEEEEEEEEcC Q lcl|Aclame:pro 632 PYGSPPALKSEEIPLVLSPKWGDSGQLFVRQADPLPLMIVSMSAEIAIGA 681 (681) Q Consensus 632 ~~~~~~~~~tG~~~v~~~~~~~~~~~v~I~~~~P~P~tvlai~~ev~vg~ 681 (681) .++.+++++||++++++.++|+++.+|+|+|++|+||+||||+||+++.= T Consensus 717 ~~~~~~~l~TG~~~v~~~~~~~~~~~i~i~~d~P~P~tvlsi~~~~~~nd 766 (768) T protein:vir:10 717 AMDRAVPLFDGDMESDWRGGYEGQSWICYQNDQPLPVTLLGFFPILDTQD 766 (768) T ss_pred ccCccCCcccCEEEEEecCCCCcceEEEEEECCCCCEEEEEEEEEEEEee Confidence 78999999999999999999999999999999999999999999999999 No 7 >protein:vir:102644 Length: 594 # NCBI annotation: Hypothetical protein # Family: family:all:780 # MgeID: mge:1624 # MgeName: VP2 # Cross-refs: genbank:acc:YP_024422;genbank:gi:48696643;genbank:GeneID:2948111 Probab=100.00 E-value=1.5e-186 Score=1039.31 Aligned_cols=569 Identities=19% Similarity=0.277 Sum_probs=517.7 Q ss_pred CCcceEeecccccccccchhcccchHHHHHHHHhhhhccEEeeccCeeeCCchheeeecCCCcCceEEEEEEeCCCCeEE Q lcl|Aclame:pro 1 MSNVRVLQRSFGGGEISPEMFGRIDDVKYQSGLAICRNFVVKPQGPAENRAGFAFVREVKDSAKKVRLIPFTYSVTQTMV 80 (681) Q Consensus 1 M~~~~~~q~~f~~GElsP~l~~R~D~~~y~~~~~~~~N~~~~~~Gg~~rRpG~~~v~~~~~~~~~~rlipf~~~~~~~y~ 80 (681) |++ ++|+||++|||||+|++|.||+||++||++|+||+++||||++|||||+|++.+|+.++++|||||+|+++|+|+ T Consensus 1 m~~--~~~~~F~~GelsP~l~~r~Dl~~y~~~~~~~~n~~~~~~G~~~rR~G~~~~~~~~~~~~~~~lipF~~s~~~~~~ 78 (594) T protein:vir:10 1 MAD--FSQTSFKGGVIAPRLQFNEYESAYHHSIEDAVNFVVTEQGSLITRCGSEEVGLCQDGEVRLFRLPAVDAPSNDVI 78 (594) T ss_pred Cce--eeccccCcceecceeccchhHHHHHHHHhhhhceEEEecCCeecCChhHhhhhccCCCCCEEEEEEEeCCCCeEE Confidence 996 679999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred EEEcCCEEEEEeCCcEEe--eCCEEEEEeCCCCc---hhhceeeEEEeccEEEEEcCCcceEEEEECCCCcEEEEEEeec Q lcl|Aclame:pro 81 IELGAGYFRFHTNGGTLL--DGAVPYEIANPYAE---ADLFNIHYVQSADVLTLVHPNYAPRELRRLGATNWQLATIAFT 155 (681) Q Consensus 81 lefg~~~irv~~~~~~v~--~~~~~~~i~TPy~~---a~l~~l~~~qsaD~l~lvh~~~~p~~l~R~~~~~W~~~~~~f~ 155 (681) ||||+++||||+++++++ +++.+++++|||+. ++|.+|+|+|++|+||++|++++|++|.|.++++|.+..+.+. T Consensus 79 le~g~~~~r~~~~~~~~v~~~~~~~~~~~tp~~~t~~~~l~~i~~tqsad~~~~~~~~~~p~~L~R~~~~~w~~~~~~~~ 158 (594) T protein:vir:10 79 VEVGNTNIAVWVNDVRQVVANTPSEWRNTIDRIQTAYDTIGDDAGAANTGRLIMVHPALQPKRLYRDNNNAWQFVNMHTG 158 (594) T ss_pred EEEcCCeEEEEecCcEEEEccCCCcccccccceeeccCCccceEEEEEeeEEEEEcCCCCceEEEEccCCCceEEecccC Confidence 999999999999999755 56889999999986 5689999999999999999999999999999999999887765 Q ss_pred cCcccccccceeeecCcceeeEEEEEEEEEeccceEEecCcccceeccceeccceeeeEEeeccCCceeeeecccceeEE Q lcl|Aclame:pro 156 SPVATPTSVTATSNNKGTDYTYRYVVTALDAEGKTESAPSSAGTCTNNLFTNGGANTIAWSASSGASRYNVYKEQGGLYG 235 (681) Q Consensus 156 ~~~~~~~~~t~t~~~~~~~~t~~~~v~a~~~~g~~~s~~s~~~t~~~~~~~~~~~~~~~w~a~~~~~~~~v~~~~~~~~~ 235 (681) ..+..+. T Consensus 159 ~~p~~~~------------------------------------------------------------------------- 165 (594) T protein:vir:10 159 AVPAEWS------------------------------------------------------------------------- 165 (594) T ss_pred ccccccc------------------------------------------------------------------------- Confidence 4332110 Q ss_pred EeeccceeEEEeccccccccccccccccCccccCCceeEEEEEcCeEEEEecCCCccEEEEEeccChhcccccCCCcCCc Q lcl|Aclame:pro 236 YIGQTTGTSLVDDNIAPDLSVTPPIYDAVFNAAGDYPAAVSYFEQRRCFAGTTNKPQNIWMTRSGTESAMSYSLPVRDDD 315 (681) Q Consensus 236 ~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~s~~~g~p~~v~f~~~RL~~~~~~~~p~~v~~S~~gd~~nF~~~~~~~D~D 315 (681) .+|||++|+||||||+|+|+++.||+|||||+|||+||+++++++||| T Consensus 166 --------------------------------~~~~p~~v~f~q~RL~f~~~~~~p~~v~~Srtgd~~nF~~~~~~~ddd 213 (594) T protein:vir:10 166 --------------------------------PSNYPQTVGIFQNRVWYVGSPVHRTYFWATRAGKLEDIAPSTANNPND 213 (594) T ss_pred --------------------------------CCccceEEEEEeeeEEEEeCCCCCceEEEEecccccccccCCCCCCCc Confidence 257999999999999999999999999999999999999999889999 Q ss_pred cEEEEEcCCCceEEEEEeecCcEEEEecCcEEEEecCCCcccccceeEEEEeeccCCcccccEEeCCeEEEEEcCCCEEE Q lcl|Aclame:pro 316 RVAFRVAAREANAIRHIVPLTELLLLTSSGEWRVASVNSDAVTPTTISVRPQSYVGATDVQPVVVNNTTIYGAARGGHVR 395 (681) Q Consensus 316 ~i~~~~~~~~~~~i~~~~~~~~Llv~t~~~e~~~~~~~~~~ltP~~~~~~~~s~~g~~~~~Pv~vg~~v~fv~~~g~~vr 395 (681) ||++++ +++.+.|+|+.+.++|+|||+++||+|+++++++|||+|++++++|.+||+.++|+.+|+.++|+|++|++|| T Consensus 214 ~i~~~~-s~~~~~~~~v~~~~~L~i~t~~~e~~l~~~~~~~lTp~~~~~~~~s~~g~~~~~P~~vg~~~~fv~~~g~~vr 292 (594) T protein:vir:10 214 PISFVG-IMEGTPCWIIASSDVLTIGTTINDYQLAASTGVSVTAATAILRRSSVQGTAAVQGIPAEEQVIFCSRNKSKVY 292 (594) T ss_pred cEEEEE-ecccceEEEEecCCceEEEecCceEEEecCCCcccccceEEEEEeeeeccCCCcceeeCCeEEEEcCCCCEEE Confidence 999965 5667777666666789999999999999877779999999999999999999999999999999999999999 Q ss_pred EEEEeeeccceeccchhhhhHHhcC------CCCEEEEEEecCCCEEEEEEcCCCeEEEEEEecccceEEEEEec-cCCc Q lcl|Aclame:pro 396 ELAYNWQANGFVTGDLSLRAAHLFD------NLDILDMAYAKAPQPIVWFISSSGKLLGLTYVPEQQIGAWHQHD-TDGV 468 (681) Q Consensus 396 e~~~~~~~~~~~~~dlt~~~~hl~~------~~~~~~~~~~~~p~~~~~~~~~dg~l~~~ty~~~q~v~aW~~w~-~~g~ 468 (681) ||+|++++|+|+++|||+|++||++ ++++++|+|+++|++++||+++||+|++++|++||+|+|||||+ ++|+ T Consensus 293 e~~y~~~~d~y~~~dlt~~a~hl~~~~~~~~~~~i~~~a~~~~p~~~~~~v~~dG~l~~~ty~~eq~v~aWs~~~~t~G~ 372 (594) T protein:vir:10 293 AMNYVREQDNWIPDEMSSQAQHLFTPISSAKGASVRRVAYISDAAKSLWVVLENGQINYCCFDRTTDTKAWTQLELSGGK 372 (594) T ss_pred EEEEeeccCceeccchhhhhhhhcCccccccCceEEEEEEecCCceEEEEEeCCCeEEEEEEecccceeeeEeeccCCCc Confidence 9999999999999999999999984 45899999999999999999999999999999999999999999 4899 Q ss_pred eEEEEEEeeCCCCEEEEEEEE--CCCCceEEE--EeeccCccccccccceEeecceeeccCcceeeccCCccCCcEEEEE Q lcl|Aclame:pro 469 FESCAVVAEGNEDRLYAVVRR--TIGGNEVRY--VERMASRQFDAQADAFFVDSGLTYSGEPVSHISGLEHLEGKTVSIL 544 (681) Q Consensus 469 ~~~v~~~~~~~~d~l~~~v~r--~~~g~~~~~--ie~~~~~~~~~~~~~~~lD~~~~y~~~~~~~~~gl~~l~G~~v~v~ 544 (681) |++||+|++..+|++|++|+| +++|..++| ||+|+.....+...++|+||+.+|.+ .+++|+||+|++|.++ T Consensus 373 v~~va~i~~~~~d~l~~~V~R~~ti~g~~~~y~~lE~~~~~~~~~~~~~~~~d~~~~~~~----~vsgl~hLeg~tv~v~ 448 (594) T protein:vir:10 373 VIDIAAAFNPDSDYAYVAVVRSKAINGVQKNYTVLEKISSPRTDWKRADGWVVAQVNQNG----DVLNLDRYIGRTAVIF 448 (594) T ss_pred EEEEEEeecCCCCEEEEEEEECCccccceeeEEEeecCCCccccccccceeeeecccccc----eeecccccCCceEEEE Confidence 999999999999999999999 568999987 99999988888888899999998854 4789999999999999 Q ss_pred eCCeeeccEeecCCEEEeC----CCCCeEEEeeecceeEEecceEecCCCcccccceeEEEEEEEEEeccccEEEecCCC Q lcl|Aclame:pro 545 ADGAVHPQRVVTDGAIDLD----VEAGTVHIGLPITAELQTLPVAMQLDGSFGQGRVKNINKLWLRVHRSSGIFAGPHAD 620 (681) Q Consensus 545 adG~~~~~~~v~~g~i~l~----~~~~~v~vG~~y~~~v~~~p~~~~~~~~~~~~~~~~i~rv~l~~~~S~~~~v~~~~~ 620 (681) +||.++++.+|.+|.|+|+ .++++++||++|+++++++|++++.++|+.+++++||+|++|++++|.+++++.+.. T Consensus 449 aDG~~~~~~~V~~g~itL~~~~~~~~~~v~VGl~Y~s~i~~lp~~~~~~~gs~~g~r~ri~r~~v~~~~S~g~~vg~~~~ 528 (594) T protein:vir:10 449 SKYGLEAEVEVNNIGLTHRINGYDPNTVYYVGYKMDSYFRTLTPSNGDMKKSMFGSKIRISKVQLALFDSIEPTVNGEPA 528 (594) T ss_pred eCCeecCCeEEcCCeeEeeccCCCCcceEEEeeeeeEEEEeecccccCCcccccCccEEEEEEEEEEEcceeeEECCccc Confidence 9999999999999999995 558899999999999999999999999999999999999999999999999987643 Q ss_pred eeE---EeeeecccccCCcCCcccceEEEEe-cCCcCcceEEEEEECCccCEEEEEEEEEEEEcC Q lcl|Aclame:pro 621 ALT---EVKQRTSEPYGSPPALKSEEIPLVL-SPKWGDSGQLFVRQADPLPLMIVSMSAEIAIGA 681 (681) Q Consensus 621 ~~~---~~~~~~~~~~~~~~~~~tG~~~v~~-~~~~~~~~~v~I~~~~P~P~tvlai~~ev~vg~ 681 (681) ... .............+++++|+.++.. .+||+++.+|+|+|++|+|||||||++||++|= T Consensus 529 ~~r~~~~~~~~~~~~~~g~~~~~tg~~~v~~~~~G~~~~~~i~I~qd~PlPltvlai~~ev~~~~ 593 (594) T protein:vir:10 529 DDRSTDDIMDARLLDFSSNSGSSNGTRLVDYNPLGWENDGKMVIAVEQPFLCEVVGVFSVVQSNK 593 (594) T ss_pred ccccchhhccccCCcccCcccccCCceEEEEccCCcCcccEEEEEECCCcCEEEEEEEEEEEecc Confidence 221 1111123455567788899877764 368999999999999999999999999999999 No 8 >protein:vir:99677 Length: 794 # NCBI annotation: Tail tubular protein B # Family: family:all:825 # MgeID: mge:1523 # MgeName: VP4 # Cross-refs: genbank:acc:YP_249591;genbank:gi:68299742;genbank:GeneID:3799992 Probab=100.00 E-value=6e-168 Score=937.36 Aligned_cols=667 Identities=13% Similarity=0.130 Sum_probs=520.2 Q ss_pred CCcceEeecccccccccchhcccchHHHHHHHHhhhhccEEeeccCeeeCCchheeeecCCC---cCceEEEEEEeCCCC Q lcl|Aclame:pro 1 MSNVRVLQRSFGGGEISPEMFGRIDDVKYQSGLAICRNFVVKPQGPAENRAGFAFVREVKDS---AKKVRLIPFTYSVTQ 77 (681) Q Consensus 1 M~~~~~~q~~f~~GElsP~l~~R~D~~~y~~~~~~~~N~~~~~~Gg~~rRpG~~~v~~~~~~---~~~~rlipf~~~~~~ 77 (681) ||++...++||.+| +++|+|++||++||++|+||+++|+||++||||++||+++++. +.++|||||+|+++| T Consensus 1 M~~i~~s~~n~~~G-----vS~q~D~~ry~~q~~~~~N~~~~~~gG~~rRpG~~fv~~l~~~~~~~~~~~l~~f~~~~~~ 75 (794) T protein:vir:99 1 MALISQSIKNLKGG-----ISQQPDILRYSDQGSKQINGFSSEVEGLQKRPPSVHIKRLTDQFGLGQKPYCHIINRDEVE 75 (794) T ss_pred Cceeeeecchhhcc-----eecCCchHHhhhhHhhhhcceeeeccCcccCCccceeeeecCCCCCccccEEEEEEeCCCc Confidence 99999999999999 8899999999999999999999999999999999999998875 356899999999999 Q ss_pred eEEEEEcCCEEEEEeC-CcEEeeCCEEEEEeCCCCchhhceeeEEEeccEEEEEcCCcceEEEE------ECCCCcEEEE Q lcl|Aclame:pro 78 TMVIELGAGYFRFHTN-GGTLLDGAVPYEIANPYAEADLFNIHYVQSADVLTLVHPNYAPRELR------RLGATNWQLA 150 (681) Q Consensus 78 ~y~lefg~~~irv~~~-~~~v~~~~~~~~i~TPy~~a~l~~l~~~qsaD~l~lvh~~~~p~~l~------R~~~~~W~~~ 150 (681) +|+|||++++||||.. +|.......+...+-||++.++.+|+|+|+||+|||+|++++|+++. +.++..|.+. T Consensus 76 ~y~l~f~~~~irv~~~~~g~~~~v~~~~~~~y~~~~~~~~~l~~~q~aD~~fi~n~~~~p~~~~~~~~~~~~~~~~~~~~ 155 (794) T protein:vir:99 76 RYAVFFTGSNIRVFDLFTGDEKTVNAPNGLSYVSSSNPRKDLRMVTVADYTFILNRNVATAQGTTNTPSGLAPFGHFGLV 155 (794) T ss_pred eEEEEEcCCeEEEEECCCCeEEEeeccccccccccCCccceeeEEEEccEEEEEcCCeeeeEeeeeccccCcCCCceEEE Confidence 9999999999999963 33333222222233346777889999999999999999999999986 2344556654 Q ss_pred EE-----------eeccCccc----cccccee----ee-------------------cCcceeeEEEEE-----EEE--- Q lcl|Aclame:pro 151 TI-----------AFTSPVAT----PTSVTAT----SN-------------------NKGTDYTYRYVV-----TAL--- 184 (681) Q Consensus 151 ~~-----------~f~~~~~~----~~~~t~t----~~-------------------~~~~~~t~~~~v-----~a~--- 184 (681) .+ .+.....+ +.+.... .. .....+..-... ... T Consensus 156 ~v~~g~y~~~y~v~i~gs~ta~~~tp~~~~~~~~~~~s~~~ia~~l~~~l~~~g~~v~~~~g~~~i~~~~~~~v~t~s~~ 235 (794) T protein:vir:99 156 VIRGGQYGRTYRIKVNGSVEASFETPLGDQVAHAKQIDIAYIIDQLAAGLINKGWAVTKGSGYFYFSKSGSVIINSLEVE 235 (794) T ss_pred EeccCCCCceEEEEecCCcccceeeccCcccccccccchhhhhhhhHhhhhcccceEEeCCeEEEEEecCCceeEEEEee Confidence 32 11110000 0000000 00 000000000000 000 Q ss_pred E------------e------------ccceEEecCcccceeccceeccceeeeEEeeccCCceeeeecccceeEEEeecc Q lcl|Aclame:pro 185 D------------A------------EGKTESAPSSAGTCTNNLFTNGGANTIAWSASSGASRYNVYKEQGGLYGYIGQT 240 (681) Q Consensus 185 ~------------~------------~g~~~s~~s~~~t~~~~~~~~~~~~~~~w~a~~~~~~~~v~~~~~~~~~~~~~~ 240 (681) + . .|.............+.+|.........|.++.+.....-+...++.+..+..+ T Consensus 236 ~g~~~t~~~~~~~~v~~~~~Lp~~~~~G~~v~v~~~~~~~~~~y~v~~~~~~~~w~e~~~~~~~~~~~~~t~p~~~v~~~ 315 (794) T protein:vir:99 236 DGYNGQLAWGIINDVQKTTQLPVYAPNNYIIRVSGDPTLNQDDYYVRFDASRNVWTECPAPNIKADYNKATMPHVLIREA 315 (794) T ss_pred cCCCCceeeEEeeeccceeecccCCCCCeEEEEeccCCCCCCceEEEEEcCCceEEeeccceeecceeccceEEEEeccC Confidence 0 0 000000000111112233444444556677776666555566667777777777 Q ss_pred ceeEEEeccccccccccccccccCccccCCceeEEEEEcCeEEEEecCCCccEEEEEeccChhcccccC--CCcCCccEE Q lcl|Aclame:pro 241 TGTSLVDDNIAPDLSVTPPIYDAVFNAAGDYPAAVSYFEQRRCFAGTTNKPQNIWMTRSGTESAMSYSL--PVRDDDRVA 318 (681) Q Consensus 241 ~~t~~~~~~~~~~~~~~~~~~~~~~s~~~g~p~~v~f~~~RL~~~~~~~~p~~v~~S~~gd~~nF~~~~--~~~D~D~i~ 318 (681) .++.......|.++.++++.++|.||+.+..|++|+||||||+|++ +|+|||||+||||||++++ +++|||||+ T Consensus 316 ~~~~~~~~~~w~~r~~Gd~~tnp~psf~g~~is~v~f~q~RL~f~~----~~~v~~Srtgd~~nF~~~t~~~~~DdD~I~ 391 (794) T protein:vir:99 316 DGTFTFKQADWTHRAAGDDETNPYPSFIGNSINDIFFFRNRLGFLS----GENVILSGSGNYFNFFPESVAVLTDTDPID 391 (794) T ss_pred CCceeEeeccccccccCCcccCCCccccCcceeEEEEEeeeEEEec----CCeEEEEecCCccccccccccCCCCCccEE Confidence 7777777778999999999999999999988899999999999995 4899999999999999985 578999999 Q ss_pred EEEcCCCceEEEEEeecC-cEEEEecCcEEEEecCCCcccccceeEEEEeeccCC-cccccEEeCCeEEEEEcCCCE--- Q lcl|Aclame:pro 319 FRVAAREANAIRHIVPLT-ELLLLTSSGEWRVASVNSDAVTPTTISVRPQSYVGA-TDVQPVVVNNTTIYGAARGGH--- 393 (681) Q Consensus 319 ~~~~~~~~~~i~~~~~~~-~Llv~t~~~e~~~~~~~~~~ltP~~~~~~~~s~~g~-~~~~Pv~vg~~v~fv~~~g~~--- 393 (681) ++++++++++|+|+++++ +|+|||+++||+|++ +++|||+|++++++|+|++ +.|+|+.+|++++|+|++|++ T Consensus 392 ~~~~~~~~~~i~~~v~~~~~L~l~t~~~q~~l~~--~~~lTP~~~~~~~~s~~~~~~~~~Pv~vg~~v~f~~~~g~~~~v 469 (794) T protein:vir:99 392 VAVSTNRISILKYAVPFSEELILWSDQAQFVLSS--DGGLTPTTIRLDLTTEFEVTEQARPYGIGRGVYFVSPRAKFSSV 469 (794) T ss_pred EEecCCcceeeEEEeecCCcEEEEecCcEEEEeC--CCcccceeEEEEEEEEeeccCCCCceEeCCeEEEEecCCCeeEE Confidence 999999999999999985 799999999999997 4599999999999999976 569999999999999999964 Q ss_pred EEEEEEeeeccceeccchhhhhHHhcCCCCEEEEEEecCCCEEEEEEcCCCeEEEEEEe---cccceEEEEEeccCCceE Q lcl|Aclame:pro 394 VRELAYNWQANGFVTGDLSLRAAHLFDNLDILDMAYAKAPQPIVWFISSSGKLLGLTYV---PEQQIGAWHQHDTDGVFE 470 (681) Q Consensus 394 vre~~~~~~~~~~~~~dlt~~~~hl~~~~~~~~~~~~~~p~~~~~~~~~dg~l~~~ty~---~~q~v~aW~~w~~~g~~~ 470 (681) +|+|+|++++|+|+++|||+|++||+++..+.+++++++|..++|++++||+|++|+|+ +||+|+|||||+|+|.++ T Consensus 470 ~r~~~~~~~~d~y~a~Dlt~~~~hl~~~~~~~~~a~~~~~~~~v~~~~~~g~l~~~~y~~~~~eq~v~aW~~~~~~g~~~ 549 (794) T protein:vir:99 470 RRFYAVQDVTQVKNAEDISAHVPYYVENGVFKMSGSSTENFLTILTEGNEQRVYFYKFLYLQEQLVQQSWSHWDFGVNCR 549 (794) T ss_pred EEeeeeccccCceehhhHHHHHHHhcCCCeEEEEEeCCCCcEEEEEEcCCCEEEEEEEeecCCceEEEeEEEEEcCCCeE Confidence 46678999999999999999999999987788889999999999999999999999997 478899999999999999 Q ss_pred EEEEEeeCCCCEEEEEEEECCCCceEEEEeeccCccccccccceEeecceeeccC-------------cceeeccCCccC Q lcl|Aclame:pro 471 SCAVVAEGNEDRLYAVVRRTIGGNEVRYVERMASRQFDAQADAFFVDSGLTYSGE-------------PVSHISGLEHLE 537 (681) Q Consensus 471 ~v~~~~~~~~d~l~~~v~r~~~g~~~~~ie~~~~~~~~~~~~~~~lD~~~~y~~~-------------~~~~~~gl~~l~ 537 (681) ++|++. .+|+||++|+|++++...|+.+.++...+....+.+||||+++|... +...++|++||+ T Consensus 550 ~~~~~~--~~d~l~~~v~r~~~~~ler~~~~~~~~~~~~~~~~~~lD~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~ 627 (794) T protein:vir:99 550 VLCCDM--IGAVMHLIIDSPSGVLMEKIEFTQNTKDYPDEPYRLYVDRKIEYTFPEGSYNDDDFKTRVKLKDIYGSTPAN 627 (794) T ss_pred EEEEEE--cCCEEEEEEEeCCCEEEEEEEeeeCCCCCCCcccceeeeeeeeeeecccccccCcceeEEeccccccccccC Confidence 999876 47899999999987444443333444455566778999999988643 223578999999 Q ss_pred CcEEEEEeCCeeecc------EeecCCEEEeC--CCCCeEEEeeecceeEEecceEecCCCcccc-----cceeEEEEEE Q lcl|Aclame:pro 538 GKTVSILADGAVHPQ------RVVTDGAIDLD--VEAGTVHIGLPITAELQTLPVAMQLDGSFGQ-----GRVKNINKLW 604 (681) Q Consensus 538 G~~v~v~adG~~~~~------~~v~~g~i~l~--~~~~~v~vG~~y~~~v~~~p~~~~~~~~~~~-----~~~~~i~rv~ 604 (681) |++|.+++||..... .+.+++.++++ .++++|+|||+|+++++++||+++.+++..+ .++++|+|++ T Consensus 628 g~~v~~~~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~vGl~y~s~~~~~~~~~~~~~~~g~~~~~~~gr~~l~r~~ 707 (794) T protein:vir:99 628 GQYVFISLGGVTFTFDPPAGGWQANDGLIEFDGDLRGTKFFVGEAYTFLYEFSKFLIKTTDTADGVATEDIGRLQLRRAW 707 (794) T ss_pred CceEEEEeCCceeeeecccceEecCccEEEecCCCCCcEEEEeeeeeEEEeecceEEeecCCCCceeeeccceEEEEEEE Confidence 999999999987432 33455666664 6799999999999999999999986654333 3678999999 Q ss_pred EEEeccccEEEecCCCeeEEeeeeccc------ccCCcCCcccceEEEEecCCcCcceEEEEEECCccCEEEEEEEEEEE Q lcl|Aclame:pro 605 LRVHRSSGIFAGPHADALTEVKQRTSE------PYGSPPALKSEEIPLVLSPKWGDSGQLFVRQADPLPLMIVSMSAEIA 678 (681) Q Consensus 605 l~~~~S~~~~v~~~~~~~~~~~~~~~~------~~~~~~~~~tG~~~v~~~~~~~~~~~v~I~~~~P~P~tvlai~~ev~ 678 (681) |++.+|+++++..++...+....+.+. .....++++||++++|+. +|+++.+|+|+|+.|+||+|+||+||.. T Consensus 708 ~~~~~tg~~~v~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~~tg~~~vp~~-g~~~~~~v~i~~d~P~P~tvlsi~~e~~ 786 (794) T protein:vir:99 708 VNYDKSGNFRVEVNNQGRTFTYNMTGNRLSTNELILGDESLDTGQFRYAVS-GNATQVTVSLISDTPNPLSIIGGGWEGY 786 (794) T ss_pred EEeecccceEEEECCCccceeeeccccccccccccccccccccceEEEEec-ccccceEEEEEECCCCCEEEEEEEEEEE Confidence 999999999998776544322222222 233457899999999985 6999999999999999999999999999 Q ss_pred EcC Q lcl|Aclame:pro 679 IGA 681 (681) Q Consensus 679 vg~ 681 (681) ..= T Consensus 787 y~~ 789 (794) T protein:vir:99 787 YVR 789 (794) T ss_pred Eec Confidence 988 No 9 >protein:vir:94713 Length: 785 # NCBI annotation: tail tube # Family: family:all:825 # MgeID: mge:1528 # MgeName: K1F # Cross-refs: genbank:acc:YP_338122;genbank:gi:77118200;genbank:GeneID:3707736 Probab=100.00 E-value=1.7e-166 Score=929.43 Aligned_cols=660 Identities=14% Similarity=0.155 Sum_probs=525.5 Q ss_pred CCcceEeecccccccccchhcccchHHHHHHHHhhhhccEEeeccCeeeCCchheeeecCCCc-CceEEEEEEeCCCCeE Q lcl|Aclame:pro 1 MSNVRVLQRSFGGGEISPEMFGRIDDVKYQSGLAICRNFVVKPQGPAENRAGFAFVREVKDSA-KKVRLIPFTYSVTQTM 79 (681) Q Consensus 1 M~~~~~~q~~f~~GElsP~l~~R~D~~~y~~~~~~~~N~~~~~~Gg~~rRpG~~~v~~~~~~~-~~~rlipf~~~~~~~y 79 (681) ||++...++||.+| +++|+|++||++||++|+||++.|+||++||||++||++++... +..|+++|.|+++|+| T Consensus 1 M~~~~~s~~n~~~G-----vSqq~D~~ry~~q~~~~~N~~~~~~gG~~rRpG~~~v~~l~~~~~~~~~~~~f~~~~~~~y 75 (785) T protein:vir:94 1 MPLITQSIKNLKGG-----ISQQPDILRFSDQGEAQVNCWSSESDGLQKRPPTVFKRRLNIDVGSNPKFHLINRDEQEQY 75 (785) T ss_pred Ccceeeecchhhcc-----eecCCchHHhhhHHhhhhcceeeeccCcccCChhHhhhcccCCCCcCcEEEEEEeCCCceE Confidence 99999999999999 89999999999999999999999999999999999999987544 6689999999999999 Q ss_pred EEEEcCCEEEEEeCCcE--EeeCCEEEEEeCCCCchhhceeeEEEeccEEEEEcCCcceEEEEECCCCcEEEEEEeec-- Q lcl|Aclame:pro 80 VIELGAGYFRFHTNGGT--LLDGAVPYEIANPYAEADLFNIHYVQSADVLTLVHPNYAPRELRRLGATNWQLATIAFT-- 155 (681) Q Consensus 80 ~lefg~~~irv~~~~~~--v~~~~~~~~i~TPy~~a~l~~l~~~qsaD~l~lvh~~~~p~~l~R~~~~~W~~~~~~f~-- 155 (681) +|||++++||||+.+|. .+++..+|+.++++ ..+|+|+|+||+|||+|++++|+++.|.++..|....+.|. T Consensus 76 ~l~~~~~~irv~~~~G~~~~v~~~~~y~~~~~~----~~~l~~~q~aD~~fi~n~~~~~~~~~~~~~~~~~~~~~~~~~i 151 (785) T protein:vir:94 76 YIVFNGSNIQIVDLSGNQYSVSGSVDYVKSSNP----RDDIRVVTVADYTFVVNRKVVVKGGSEKSHSGYNRKARALINL 151 (785) T ss_pred EEEEcCCeEEEEecCCcEEEEecCCCceeecCc----hhheeeEeeCCEEEEEcCCcceeeeeccCCcCCCCCCceEEEe Confidence 99999999999987663 33455566555543 34699999999999999999999999876654433222221 Q ss_pred -cCcccc-------cccce----e-----------ee-------------cCcceeeEE-----EEEEEE---------- Q lcl|Aclame:pro 156 -SPVATP-------TSVTA----T-----------SN-------------NKGTDYTYR-----YVVTAL---------- 184 (681) Q Consensus 156 -~~~~~~-------~~~t~----t-----------~~-------------~~~~~~t~~-----~~v~a~---------- 184 (681) ..++.. ..... . .. .....++.. ....+. T Consensus 152 ~~g~y~~~y~i~i~g~~~at~~t~~~s~a~~s~~~~s~~~i~~~l~~~l~a~~t~~t~~~~g~~i~i~a~s~t~~~~~s~ 231 (785) T protein:vir:94 152 RGGQYGRTLKVGINGGVKVSHKLPAGNDAENDPPKVDAQAIGAALRDLLVTAYPTFTFDLGSGFLLITAPSGTDINSVET 231 (785) T ss_pred cccccceeEEEeeCCcceeEEEEccCccccccccccchHHHHHHHHHHhhccccceeEEecCcEEEEEecCCccccceee Confidence 111000 00000 0 00 000000000 000000 Q ss_pred -------------E------------eccceEEecCcccceeccceeccceeeeEEeeccCCceeeeecccceeEEEeec Q lcl|Aclame:pro 185 -------------D------------AEGKTESAPSSAGTCTNNLFTNGGANTIAWSASSGASRYNVYKEQGGLYGYIGQ 239 (681) Q Consensus 185 -------------~------------~~g~~~s~~s~~~t~~~~~~~~~~~~~~~w~a~~~~~~~~v~~~~~~~~~~~~~ 239 (681) + .+|.........++..+.++.........|.++.+.....-+....+.+..+.. T Consensus 232 ~~~~~~t~~~~~~~~~~~~~~Lp~~~~~G~~v~v~~~~~~~~~~y~v~~~~~~g~w~e~~~~g~~~~~~~~tmp~~l~~~ 311 (785) T protein:vir:94 232 EDGYANQLISPVLDTVQTISKLPLAAPNGYIIKIQGETNSSADEYYVMYDSNTKTWKETVEPGVVTGFDNTTMPHALVRQ 311 (785) T ss_pred ecccCCeEEEEEEeeccceeccccccCCCCEEEEEccCCCCccceEEEEEcCCceEEEecccceeeeeeccccceEEEec Confidence 0 001111111112222234444444556678877777666666666778888888 Q ss_pred cceeEEEeccccccccccccccccCccccCCceeEEEEEcCeEEEEecCCCccEEEEEeccChhcccccC--CCcCCccE Q lcl|Aclame:pro 240 TTGTSLVDDNIAPDLSVTPPIYDAVFNAAGDYPAAVSYFEQRRCFAGTTNKPQNIWMTRSGTESAMSYSL--PVRDDDRV 317 (681) Q Consensus 240 ~~~t~~~~~~~~~~~~~~~~~~~~~~s~~~g~p~~v~f~~~RL~~~~~~~~p~~v~~S~~gd~~nF~~~~--~~~D~D~i 317 (681) +.++.......|.++.+++..++|.+|+.+.||++|+||||||+|++ ||+|||||+||||||++++ +++||||| T Consensus 312 ~~~~~~~~~~~w~~r~~Gd~~tnp~psf~g~~~~~v~f~q~RL~f~~----~~~v~~Srtgd~~nF~~~t~~~~~DdD~i 387 (785) T protein:vir:94 312 SDGSFEFKALDWSKRGAGNDDTNPMPSFVDATINDVFFYRNRLGFLS----GENVIMSRSASYFAFFPKSVATLSDDDPI 387 (785) T ss_pred cCCceEEeccccccccCCCcccCCcceecccccceEEEEeceEEEec----CCeEEEEccCCcccCccccccCCCCCccE Confidence 88888888888999999999999999999999999999999999995 7999999999999999975 66799999 Q ss_pred EEEEcCCCceEEEEEeecC-cEEEEecCcEEEEecCCCcccccceeEEEEeeccCC-cccccEEeCCeEEEEEcCCCE-- Q lcl|Aclame:pro 318 AFRVAAREANAIRHIVPLT-ELLLLTSSGEWRVASVNSDAVTPTTISVRPQSYVGA-TDVQPVVVNNTTIYGAARGGH-- 393 (681) Q Consensus 318 ~~~~~~~~~~~i~~~~~~~-~Llv~t~~~e~~~~~~~~~~ltP~~~~~~~~s~~g~-~~~~Pv~vg~~v~fv~~~g~~-- 393 (681) +++++++|+|+|+|+++++ +|+|||+++||+|++ +++|||+|++++++|.|++ +.++|+.+|++++|+|++|++ T Consensus 388 ~~~~~~~~~~~i~~~v~~~~~L~l~T~~~e~~l~~--~~~lTP~~~~~~~~s~~~~~~~~~Pv~vg~~v~f~~~~g~~~~ 465 (785) T protein:vir:94 388 DVAVSHPRISILKYAVPFSEQLLLWSDEVQFVMTS--SGVLTSKSIQLDVGSEFALGDNARPFAVGRSVFFSAPRGSFTS 465 (785) T ss_pred EEEecCCcceeeEEEeecCCcEEEEecCcEEEEcC--CCcccceeEEEEEEEeeeccCCCCceEeCCeEEEEecCCCeeE Confidence 9999999999999999996 799999999999986 4699999999999999976 579999999999999999964 Q ss_pred E-EEEEEeeeccceeccchhhhhHHhcCCCCEEEEEEecCCCEEEEEEcCCCeEEEEEEe---cccceEEEEEeccCCc- Q lcl|Aclame:pro 394 V-RELAYNWQANGFVTGDLSLRAAHLFDNLDILDMAYAKAPQPIVWFISSSGKLLGLTYV---PEQQIGAWHQHDTDGV- 468 (681) Q Consensus 394 v-re~~~~~~~~~~~~~dlt~~~~hl~~~~~~~~~~~~~~p~~~~~~~~~dg~l~~~ty~---~~q~v~aW~~w~~~g~- 468 (681) + |+|.|++.+|+|+++|||+|++||++++.+.+++++++|..++|++++||+|++|+|+ +||+|+|||||+|+|. T Consensus 466 v~r~~~~~~~~d~y~~~dlt~~~~~~~~g~~~~~~a~~~~~~~~~~~~~~~g~l~~~~y~~~~~e~~v~aW~r~~~~~~~ 545 (785) T protein:vir:94 466 IKRYFAVADVSDVKDADDTTGHVLSYIPNGVFDIQGTGTENYICVNSTGAYNRIYIYKFLFKDSVQLQASWSHWEFPKDD 545 (785) T ss_pred EEeeeeecccccceehhhHHHHHHHhcCCCcEEEEEecCCCcEEEEEEcCCCEEEEEEEeecCCceEEEEEEEEEeCCCe Confidence 3 5668899999999999999999999998888999999999999999999999999996 8899999999999874 Q ss_pred -eEEEEEEeeCCCCEEEEEEEECCCCceEEEEeeccCc-cccccccceEeecceeeccC--------------cceeecc Q lcl|Aclame:pro 469 -FESCAVVAEGNEDRLYAVVRRTIGGNEVRYVERMASR-QFDAQADAFFVDSGLTYSGE--------------PVSHISG 532 (681) Q Consensus 469 -~~~v~~~~~~~~d~l~~~v~r~~~g~~~~~ie~~~~~-~~~~~~~~~~lD~~~~y~~~--------------~~~~~~g 532 (681) ++++|++ +|+||++++|. +|..++|+|++... .+....+++||||+++|... ....+.+ T Consensus 546 ~~~~~~~~----~d~~~~vv~r~-~g~~~~~ie~~~~~~d~~~~~~~~~lD~~~~~~~~~~~~~~~~~~t~~~~~~~~~g 620 (785) T protein:vir:94 546 KILASASI----GSTMFIVRQHQ-GGVDIEHLKFIKEATDFPSEPYRLHVDSKVSMVIPIGSFNADTYKTTVDIGAAYGG 620 (785) T ss_pred EEEEEEEe----CCEEEEEEEcC-CCEEEEEEEeecccCCCCCcceeEEeeeeeEEEecCcceecccccccccccccccc Confidence 5555554 78999999997 89999999997654 34556778999999887432 1122458 Q ss_pred CCccCCcEEEEEeCCeeeccEeecCCE--EEe--CCCCCeEEEeeecceeEEecceEecCCCcccc----cceeEEEEEE Q lcl|Aclame:pro 533 LEHLEGKTVSILADGAVHPQRVVTDGA--IDL--DVEAGTVHIGLPITAELQTLPVAMQLDGSFGQ----GRVKNINKLW 604 (681) Q Consensus 533 l~~l~G~~v~v~adG~~~~~~~v~~g~--i~l--~~~~~~v~vG~~y~~~v~~~p~~~~~~~~~~~----~~~~~i~rv~ 604 (681) +.|++|++|.+++||.+++...|.++. +++ ++++++|+|||+|+++++|+||+++.+++... .+|+||+|++ T Consensus 621 ~~~leg~~v~v~adG~~~~~~~v~~~~~tl~~~g~~~~~~v~vGl~y~~~~~~~~~~~~~~~~~~~~~~~~gr~~l~r~~ 700 (785) T protein:vir:94 621 NAPSPGRYYLIDSQGAYLDLGELTSISTVITLNGDWSGRTVFIGRSYLMSYKFSRFLIKIEDDSGTQSEDTGRLQLRRAW 700 (785) T ss_pred CCccCCeEEEEeeCCcCccCceEcCCCcEEEecCCCCCceEEEeeeeeEEEeecceeEEecCCCcccccccccEEEEEEE Confidence 999999999999999999888887664 444 46789999999999999999999986665332 3568999999 Q ss_pred EEEeccccEEEecCCCeeE---Eee-eecccccCCcCCcccceEEEEecCCcCcceEEEEEECCccCEEEEEEEEEEEEc Q lcl|Aclame:pro 605 LRVHRSSGIFAGPHADALT---EVK-QRTSEPYGSPPALKSEEIPLVLSPKWGDSGQLFVRQADPLPLMIVSMSAEIAIG 680 (681) Q Consensus 605 l~~~~S~~~~v~~~~~~~~---~~~-~~~~~~~~~~~~~~tG~~~v~~~~~~~~~~~v~I~~~~P~P~tvlai~~ev~vg 680 (681) +++.+|+++.++++....+ .+. .+-++++...++++||+++||+. +|+++.+|+|+|+.|+||+|+||+||.... T Consensus 701 ~~~~~sg~~~v~v~~~~~~~~~~~~~~~~g~~~~~~~~~~tg~~~vp~~-g~~~~~~v~i~~~~P~P~tvlsi~~eg~y~ 779 (785) T protein:vir:94 701 VNYRDTGALRLIVRNGEREFVNTFNGYTLGQQTIGTTNIGDGQYRFAMN-GNALTTSLTLESDYPTPVSIVGCGWEASYA 779 (785) T ss_pred EEeecccceEEEecCCCccceeeecCcccCcccccccccccceEEEEee-cccceEEEEEEECCCCceEEEEEEEEEEEe Confidence 9999999999986654332 221 12234444567899999999986 589999999999999999999999999998 Q ss_pred C Q lcl|Aclame:pro 681 A 681 (681) Q Consensus 681 ~ 681 (681) = T Consensus 780 ~ 780 (785) T protein:vir:94 780 K 780 (785) T ss_pred c Confidence 8 No 10 >protein:vir:94583 Length: 792 # NCBI annotation: Tubular tail protein B # Family: family:all:825 # MgeID: mge:1516 # MgeName: Berlin # Cross-refs: genbank:acc:YP_919014;genbank:gi:119637778;genbank:GeneID:5179343 Probab=100.00 E-value=1.4e-165 Score=924.34 Aligned_cols=663 Identities=13% Similarity=0.128 Sum_probs=526.5 Q ss_pred CCcceEeecccccccccchhcccchHHHHHHHHhhhhccEEeeccCeeeCCchheeeecCCC---cCceEEEEEEeCCCC Q lcl|Aclame:pro 1 MSNVRVLQRSFGGGEISPEMFGRIDDVKYQSGLAICRNFVVKPQGPAENRAGFAFVREVKDS---AKKVRLIPFTYSVTQ 77 (681) Q Consensus 1 M~~~~~~q~~f~~GElsP~l~~R~D~~~y~~~~~~~~N~~~~~~Gg~~rRpG~~~v~~~~~~---~~~~rlipf~~~~~~ 77 (681) ||++...++||.+| +++|+|++||++||++|+||+++|+||++||||++||+.+++. .+++||+||+|+++| T Consensus 1 M~~i~~s~~n~~~G-----iSqq~D~~ry~~q~~~~~N~~~~~~gG~~rRpG~~fv~~l~~~~~~~~~~~l~~~~~~~~q 75 (792) T protein:vir:94 1 MALISQSVKNLKGG-----ISQQPNILRFPEQGSEQINGWSSETEGLQKRPPFVFTKTIGDQNALGAKPLVHLINRDSAE 75 (792) T ss_pred Ccceeeecchhhcc-----eecCcchHHhhhhhhhhhcceeeeccccccCChhHHHHhhhcCCCCCcccEEEEEEeCCCc Confidence 99999999999999 8899999999999999999999999999999999999988765 466899999999999 Q ss_pred eEEEEEcCCEEEEEeCCcEEeeCCEEEEEeCCCCchhh--ceeeEEEeccEEEEEcCCcceEEEEECCCCcEEEEE--Ee Q lcl|Aclame:pro 78 TMVIELGAGYFRFHTNGGTLLDGAVPYEIANPYAEADL--FNIHYVQSADVLTLVHPNYAPRELRRLGATNWQLAT--IA 153 (681) Q Consensus 78 ~y~lefg~~~irv~~~~~~v~~~~~~~~i~TPy~~a~l--~~l~~~qsaD~l~lvh~~~~p~~l~R~~~~~W~~~~--~~ 153 (681) +|+|||++++||||..+|... .++..+||..+.. .+|+++|+||+|||+|++++|+++.|.+++.|.-.. +. T Consensus 76 ~y~l~f~~~~~rv~~~~g~~~----~~~~~~~y~~~~~~~~~l~~~q~aD~~fi~n~~~~~~~~~~~~~~~~~~~~~~v~ 151 (792) T protein:vir:94 76 QYYVVFTGQGVRVFDLNGKEY----DVKGDLSYVKVENPRDDLRMVTVADYTFIVNRNMVVRPDTTPLYTLKENGDCLIN 151 (792) T ss_pred eEEEEEcCCeEEEEecCCceE----EecccCceeeecCCcceeEEEEEcCEEEEEeCCccceeEecCcCCCCCCceEEEE Confidence 999999999999997555321 2344556654443 569999999999999999999999999988764211 10 Q ss_pred eccCcccc------------------cccceeeec-----------------CcceeeEE-----EEEEEEEec------ Q lcl|Aclame:pro 154 FTSPVATP------------------TSVTATSNN-----------------KGTDYTYR-----YVVTALDAE------ 187 (681) Q Consensus 154 f~~~~~~~------------------~~~t~t~~~-----------------~~~~~t~~-----~~v~a~~~~------ 187 (681) ...+.+.. .....+... ....++.. ..+.+.... T Consensus 152 i~~g~y~~~y~i~i~~~~~~~~~~~~t~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 231 (792) T protein:vir:94 152 IRGGMYGRTLAFTINNTKIAYEIAHGDAPEHSKQTDAQWLVKKLAGLARLNVAFKGWTFTEGPGYIHVIAPSNSQINSLS 231 (792) T ss_pred ccCCCcceeEEEEecCceeeeeeecCcccceecccchhhhhhhhhhhccccccccccEEEECCeEEEEEecCCceeeeee Confidence 01111100 000000000 00000000 000000000 Q ss_pred -----------------------------cceEEecCcccceeccceeccceeeeEEeeccCCceeeeecccceeEEEee Q lcl|Aclame:pro 188 -----------------------------GKTESAPSSAGTCTNNLFTNGGANTIAWSASSGASRYNVYKEQGGLYGYIG 238 (681) Q Consensus 188 -----------------------------g~~~s~~s~~~t~~~~~~~~~~~~~~~w~a~~~~~~~~v~~~~~~~~~~~~ 238 (681) |.............+.++.........|.++.+......+...++.+..+. T Consensus 232 ~~~g~~~~~~~~~~~~v~~~~~lp~~~~~G~~v~i~~~~~~~~d~y~v~~~~~~~~w~E~~~~~~~~~~~~~tmp~~lv~ 311 (792) T protein:vir:94 232 TEDGYADQLMNAVMHTSQSFSRLPVEAPNGYTVKIVGDTSKTSDMFYVQYDNMKKVWKEVAGWGVQKGLNGGTMPHALVR 311 (792) T ss_pred cccCcCcceeeeeeecccccccccccCCCCcEEEEEccCCCCccceEEEEEcCCceEEEecccceeeeecccccCeeEEE Confidence 000000000111112233333344566777777777777777778888888 Q ss_pred ccceeEEEeccccccccccccccccCccccCCceeEEEEEcCeEEEEecCCCccEEEEEeccChhcccccC--CCcCCcc Q lcl|Aclame:pro 239 QTTGTSLVDDNIAPDLSVTPPIYDAVFNAAGDYPAAVSYFEQRRCFAGTTNKPQNIWMTRSGTESAMSYSL--PVRDDDR 316 (681) Q Consensus 239 ~~~~t~~~~~~~~~~~~~~~~~~~~~~s~~~g~p~~v~f~~~RL~~~~~~~~p~~v~~S~~gd~~nF~~~~--~~~D~D~ 316 (681) .+.++.......|.++.++++.++|.||+.+..|++|+||||||+|++ ||+|||||+||||||++++ +++|||| T Consensus 312 ~~~~~~~~~~~~w~~r~~gd~~tnp~psf~g~~i~~v~f~q~RL~f~~----~~~v~~Srtgd~~nF~~~t~~~~~DdD~ 387 (792) T protein:vir:94 312 QADGSFQMQVLPWTQRTCGDMDTNPTPSIVDQKINDVFFFRNRLGFLA----GENIVMSRTSKYFSLFPASVANLSDDDP 387 (792) T ss_pred cCCCcEEEEeccccccccCccccCccceeccCCcceEEEEcceEEEec----CCeEEEEccCCcccCccccccCCCCCcc Confidence 887787777777999999999999999999888899999999999995 7999999999999999985 4679999 Q ss_pred EEEEEcCCCceEEEEEeecC-cEEEEecCcEEEEecCCCcccccceeEEEEeeccCCc-ccccEEeCCeEEEEEcCCCE- Q lcl|Aclame:pro 317 VAFRVAAREANAIRHIVPLT-ELLLLTSSGEWRVASVNSDAVTPTTISVRPQSYVGAT-DVQPVVVNNTTIYGAARGGH- 393 (681) Q Consensus 317 i~~~~~~~~~~~i~~~~~~~-~Llv~t~~~e~~~~~~~~~~ltP~~~~~~~~s~~g~~-~~~Pv~vg~~v~fv~~~g~~- 393 (681) |+++++++++++|+|+++++ +|+|||+++||+|++ +++|||+|++++++|+|+++ .++|+.+|++++|+|++|++ T Consensus 388 I~~~~ss~~~~~i~~~v~~~~~L~l~T~~~q~~l~~--~~~lTP~~~~i~~~s~~~~~~~~~Pv~vG~~v~Fv~~~g~~~ 465 (792) T protein:vir:94 388 IDVAVSHNRISILKYAVPFSEELLLWSDQAQFVLSA--QGILSPKSVELNLTTEFDVSDRARPFGVGRGVYFASPRASYT 465 (792) T ss_pred EEEEecCCcceeeeEEeecCCcEEEEecCcEEEEeC--CCcccceeEEEEEEEEeeccCCCCceEeCCeEEEeecCCCee Confidence 99999999999999999996 799999999999987 46999999999999999764 69999999999999999964 Q ss_pred -E-EEEEEeeeccceeccchhhhhHHhcCCCCEEEEEEecCCCEEEEEEcCCCeEEEEEEe---cccceEEEEEeccCCc Q lcl|Aclame:pro 394 -V-RELAYNWQANGFVTGDLSLRAAHLFDNLDILDMAYAKAPQPIVWFISSSGKLLGLTYV---PEQQIGAWHQHDTDGV 468 (681) Q Consensus 394 -v-re~~~~~~~~~~~~~dlt~~~~hl~~~~~~~~~~~~~~p~~~~~~~~~dg~l~~~ty~---~~q~v~aW~~w~~~g~ 468 (681) + |+|+|++.+|+|+++|||+|++|||++..+..++++++|..++|++++||+|++|+|+ +||+|+|||||+++|. T Consensus 466 ~v~r~~~~~~~~d~y~a~DlT~~~~hl~~~~v~~~~a~~~~~~~vv~~~~~~g~l~~~ty~~~~~e~~v~aW~~~~~~g~ 545 (792) T protein:vir:94 466 SLNRYYAVQDVSSVKSAEDMSAHVPNYIPNGVFSIRGSSTENFISVLSSNAPSRIFLYKFLYLNEEIAQQSWSHWELGSN 545 (792) T ss_pred EEEeeeeeccccCceehhhHHHHHHHhcCCceEEEEEeCCCCcEEEEEEcCCCeEEEEEEeecCCceEEEeEEEEEcCCc Confidence 4 5578999999999999999999999987677889999999999999999999999997 8889999999999999 Q ss_pred eEEEEEEeeCCCCEEEEEEEECCCCceEEEEeeccCccccccccceEeecceeeccCcc-------------eeeccCCc Q lcl|Aclame:pro 469 FESCAVVAEGNEDRLYAVVRRTIGGNEVRYVERMASRQFDAQADAFFVDSGLTYSGEPV-------------SHISGLEH 535 (681) Q Consensus 469 ~~~v~~~~~~~~d~l~~~v~r~~~g~~~~~ie~~~~~~~~~~~~~~~lD~~~~y~~~~~-------------~~~~gl~~ 535 (681) ++++|+ ...+|+||++|+|+++++..|+.|.++...+....+++||||+++|..... .++.+|+| T Consensus 546 ~~~~~~--~~~~D~l~~~v~r~~~~~~~r~~~~~~~~d~~~~~~~~~lD~~~~~~~~~~~~~~~~~~T~~~~~~~~gl~~ 623 (792) T protein:vir:94 546 VTVLAC--DSIGSTMYLVLRNQSHTWMCRAHFTKNSIDFPDEPYRLYIDNKVKYVIPEGSYNDDTYATTVKPVDVYGMKY 623 (792) T ss_pred EEEEEE--eecCCEEEEEEEeCCCEEEEEEEEeecccccCCCcceeeeeeeeeEEecCcceecCceeeeeccccccCccc Confidence 999986 445799999999999999999988888777777788999999998853221 13579999 Q ss_pred cCCcEEEEEeCCeee----c--cEeecCCEEEeC--CCCCeEEEeeecceeEEecceEecCCCcccc-----cceeEEEE Q lcl|Aclame:pro 536 LEGKTVSILADGAVH----P--QRVVTDGAIDLD--VEAGTVHIGLPITAELQTLPVAMQLDGSFGQ-----GRVKNINK 602 (681) Q Consensus 536 l~G~~v~v~adG~~~----~--~~~v~~g~i~l~--~~~~~v~vG~~y~~~v~~~p~~~~~~~~~~~-----~~~~~i~r 602 (681) ++|+++.+++||... + ..+..++.++++ .++++|+|||+|+++++++||+++.+.+..+ .+|+||+| T Consensus 624 l~G~~v~v~~dG~~~~~~~~~~~~~~~~~~i~~~g~~~a~~v~VGl~y~~~~~~~~~~~~~~~g~~~~~~~~~gr~rl~r 703 (792) T protein:vir:94 624 WTGKFYIVASDGLVSWFEPPRGGWPNGVPMLTMSGNREGETIYVGLAISFRYVFSKFLIKKTADDGSIATEDIGRLQLRR 703 (792) T ss_pred ccCcEEEEEecCceeEeecccceecCCccEEEecCCccCCeEEEeeeeeEEEEeccceeeccCCCcCccccceeeEEEEE Confidence 999999999999753 2 334456677775 6789999999999999999999987766544 24689999 Q ss_pred EEEEEeccccEEEecCCCeeEEee----ee--cccccCCcCCcccceEEEEecCCcCcceEEEEEECCccCEEEEEEEEE Q lcl|Aclame:pro 603 LWLRVHRSSGIFAGPHADALTEVK----QR--TSEPYGSPPALKSEEIPLVLSPKWGDSGQLFVRQADPLPLMIVSMSAE 676 (681) Q Consensus 603 v~l~~~~S~~~~v~~~~~~~~~~~----~~--~~~~~~~~~~~~tG~~~v~~~~~~~~~~~v~I~~~~P~P~tvlai~~e 676 (681) +++++.+|+.+.++.+....+... .+ .......+|+++||++++|+. +|+++.+|+|+|+.|+||+|+||+|| T Consensus 704 ~~~~~~~tg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~tg~~~vp~~-g~~~~~~v~i~~d~P~P~tvlai~~e 782 (792) T protein:vir:94 704 AWVNYEDSGAFTVEVENTSRLFSYDMAGARLGSNVLRAGGLNVGTGQFRFPVT-GNAQLNEVRIISEHTTPLNVIGCGWE 782 (792) T ss_pred EEEeeeccceeEEEEcCCCcceeeeeccceeccccccccccccccceEEEEee-ccCceEEEEEEECCCCCEEEEEEEEE Confidence 999999999999987655332211 11 122234567889999999985 69999999999999999999999999 Q ss_pred EEEcC Q lcl|Aclame:pro 677 IAIGA 681 (681) Q Consensus 677 v~vg~ 681 (681) ....= T Consensus 783 g~y~~ 787 (792) T protein:vir:94 783 GNYLR 787 (792) T ss_pred EEEec Confidence 98887 No 11 >protein:vir:2203 Length: 794 # NCBI annotation: tail tubular protein B # Family: family:all:825 # MgeID: mge:49 # MgeName: T7 # Cross-refs: genbank:acc:NP_042000;swissprot:sw:p03747;genbank:gi:9627472;uniprot:P03747;genbank:GeneID:1261024 Probab=100.00 E-value=3.4e-164 Score=916.78 Aligned_cols=664 Identities=13% Similarity=0.132 Sum_probs=526.6 Q ss_pred CCcceEeecccccccccchhcccchHHHHHHHHhhhhccEEeeccCeeeCCchheeeecCCCc---CceEEEEEEeCCCC Q lcl|Aclame:pro 1 MSNVRVLQRSFGGGEISPEMFGRIDDVKYQSGLAICRNFVVKPQGPAENRAGFAFVREVKDSA---KKVRLIPFTYSVTQ 77 (681) Q Consensus 1 M~~~~~~q~~f~~GElsP~l~~R~D~~~y~~~~~~~~N~~~~~~Gg~~rRpG~~~v~~~~~~~---~~~rlipf~~~~~~ 77 (681) ||++...++||.+| +++|+|++||++||++|+||+++|+||++||||++||+++++.. ++.||++|.|+++| T Consensus 1 M~~i~~s~~n~~~G-----vSqq~D~~ry~~q~~~~~N~~~~~~gG~~rRpG~~fv~~l~~~~~~~~~~~l~~~~~~~~~ 75 (794) T protein:vir:22 1 MALISQSIKNLKGG-----ISQQPDILRYPDQGSRQVNGWSSETEGLQKRPPLVFLNTLGDNGALGQAPYIHLINRDEHE 75 (794) T ss_pred Cceeeeecchhhcc-----cccCCchHHhhhHHhhhhcceeeccCCceeCCchHhhhhhcccCCCCCccEEEEEEeCCCc Confidence 99999999999999 78999999999999999999999999999999999999987542 44677778899999 Q ss_pred eEEEEEcCCEEEEEeCCcEEeeCCEEEEEeCCCC--chhhceeeEEEeccEEEEEcCCcceEEEEECCCCcEE-EEEEee Q lcl|Aclame:pro 78 TMVIELGAGYFRFHTNGGTLLDGAVPYEIANPYA--EADLFNIHYVQSADVLTLVHPNYAPRELRRLGATNWQ-LATIAF 154 (681) Q Consensus 78 ~y~lefg~~~irv~~~~~~v~~~~~~~~i~TPy~--~a~l~~l~~~qsaD~l~lvh~~~~p~~l~R~~~~~W~-~~~~~f 154 (681) +|+|||++++||||..+|....-. ++..+||. +.++.+|+|+|+||+|||||++++|+++.|.++++|. .....| T Consensus 76 ~y~l~~~~~~irv~~~~G~~~~v~--~~~~~~y~~~~~~~~~l~~~q~aD~~fi~~~~~~p~~~~~~~~~~~~~~~~~g~ 153 (794) T protein:vir:22 76 QYYAVFTGSGIRVFDLSGNEKQVR--YPNGSNYIKTANPRNDLRMVTVADYTFIVNRNVVAQKNTKSVNLPNYNPNQDGL 153 (794) T ss_pred EEEEEEcCCeEEEEecCCcEEEee--cCCCccceecCCCcccEEEEEEcCEEEEEcCCeeeeEeeccccCCCCCCCceEE Confidence 999999999999999887544322 23345663 4567789999999999999999999999999888761 111000 Q ss_pred ---ccCcc---------------------cccccceeee-------------cCcceeeEE-----EEEEEEEec----- Q lcl|Aclame:pro 155 ---TSPVA---------------------TPTSVTATSN-------------NKGTDYTYR-----YVVTALDAE----- 187 (681) Q Consensus 155 ---~~~~~---------------------~~~~~t~t~~-------------~~~~~~t~~-----~~v~a~~~~----- 187 (681) ..+.+ .+........ .....++.. ..+.+.+.. T Consensus 154 v~v~~g~y~~ty~v~I~~~~~a~~~~p~gt~~~~~~~~~~~~ia~~L~~~l~~~~~~~t~~~~~~~~~i~a~~~~~~~~~ 233 (794) T protein:vir:22 154 INVRGGQYGRELIVHINGKDVAKYKIPDGSQPEHVNNTDAQWLAEELAKQMRTNLSDWTVNVGQGFIHVTAPSGQQIDSF 233 (794) T ss_pred EEccCCccceeEEEEeccCcceEEEEcCCCccccceeechhhhhhhhhhhheeccccceEEeCCceEEEEEcCCceEEEE Confidence 00000 0000000000 000000000 000000000 Q ss_pred ------------------------------cceEEecCcccceeccceeccceeeeEEeeccCCceeeeecccceeEEEe Q lcl|Aclame:pro 188 ------------------------------GKTESAPSSAGTCTNNLFTNGGANTIAWSASSGASRYNVYKEQGGLYGYI 237 (681) Q Consensus 188 ------------------------------g~~~s~~s~~~t~~~~~~~~~~~~~~~w~a~~~~~~~~v~~~~~~~~~~~ 237 (681) |..........+..+.++.........|.++.+..........++.+..+ T Consensus 234 t~~~g~~~t~~~~~~~~~~~~~~lp~~~~~G~~v~i~~~~~~~~~~Y~v~~~~~~~~w~e~~~~~~~~~~~~~t~p~~lv 313 (794) T protein:vir:22 234 TTKDGYADQLINPVTHYAQSFSKLPPNAPNGYMVKIVGDASKSADQYYVRYDAERKVWTETLGWNTEDQVLWETMPHALV 313 (794) T ss_pred eeecccCcceeEEEEeccccceeccccCCCCeEEEEEeCCCCCcceeEEEEeccceEEEEeeeccceeeecccceeeEee Confidence 00000111111122334444455556777777766666666677777777 Q ss_pred eccceeEEEeccccccccccccccccCccccCCceeEEEEEcCeEEEEecCCCccEEEEEeccChhcccccC--CCcCCc Q lcl|Aclame:pro 238 GQTTGTSLVDDNIAPDLSVTPPIYDAVFNAAGDYPAAVSYFEQRRCFAGTTNKPQNIWMTRSGTESAMSYSL--PVRDDD 315 (681) Q Consensus 238 ~~~~~t~~~~~~~~~~~~~~~~~~~~~~s~~~g~p~~v~f~~~RL~~~~~~~~p~~v~~S~~gd~~nF~~~~--~~~D~D 315 (681) ..+.++.......|..+..++..++|.+|+.+.+|++|+||||||+|++ ||+|||||+||||||++++ +++||| T Consensus 314 ~~~~~~~~~~~~~w~~r~~Gd~~tnp~psf~g~~i~~v~f~q~RL~f~~----~~~v~~Srtgd~~nF~~~t~~~~~DdD 389 (794) T protein:vir:22 314 RAADGNFDFKWLEWSPKSCGDVDTNPWPSFVGSSINDVFFFRNRLGFLS----GENIILSRTAKYFNFYPASIANLSDDD 389 (794) T ss_pred eccCCcEEEeeccccccccCccccCCcceecCCCcceEEEEcceEEEec----CCeEEEEccCCccccccccCcCCCCCc Confidence 7777777777777999999999999999999999999999999999995 7999999999999999975 678999 Q ss_pred cEEEEEcCCCceEEEEEeecC-cEEEEecCcEEEEecCCCcccccceeEEEEeeccCCc-ccccEEeCCeEEEEEcCCCE Q lcl|Aclame:pro 316 RVAFRVAAREANAIRHIVPLT-ELLLLTSSGEWRVASVNSDAVTPTTISVRPQSYVGAT-DVQPVVVNNTTIYGAARGGH 393 (681) Q Consensus 316 ~i~~~~~~~~~~~i~~~~~~~-~Llv~t~~~e~~~~~~~~~~ltP~~~~~~~~s~~g~~-~~~Pv~vg~~v~fv~~~g~~ 393 (681) ||+++++++++++|+|+++++ +|+|||+++||+|++ +++|||+|++++++|+|+++ .++|+.+|++++|+|++|++ T Consensus 390 ~i~~~~ss~~~~~i~~~v~~~~~L~i~t~~~e~~l~~--~~~lTP~~~~~~~~s~~~~~~~~~Pv~vg~~v~f~~~~g~~ 467 (794) T protein:vir:22 390 PIDVAVSTNRIAILKYAVPFSEELLIWSDEAQFVLTA--SGTLTSKSVELNLTTQFDVQDRARPFGIGRNVYFASPRSSF 467 (794) T ss_pred cEEEEecCCcceeeEEEeecCCcEEEEecCcEEEEeC--CCcccceeEEEEEEEEeeccCCCCceEeCCeEEEEecCCCe Confidence 999999999999999999985 799999999999987 45999999999999999775 69999999999999999964 Q ss_pred ---EEEEEEeeeccceeccchhhhhHHhcCCCCEEEEEEecCCCEEEEEEcCCCeEEEEEEe---cccceEEEEEeccCC Q lcl|Aclame:pro 394 ---VRELAYNWQANGFVTGDLSLRAAHLFDNLDILDMAYAKAPQPIVWFISSSGKLLGLTYV---PEQQIGAWHQHDTDG 467 (681) Q Consensus 394 ---vre~~~~~~~~~~~~~dlt~~~~hl~~~~~~~~~~~~~~p~~~~~~~~~dg~l~~~ty~---~~q~v~aW~~w~~~g 467 (681) +|+|+|++.+|+|+++|||+|++||+++..+..++++++|..++|++++||+|++|+|+ +||+|+|||||+|+| T Consensus 468 ~~~~r~~~~~~~~d~y~~~Dlt~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~y~~~~~e~~v~aW~~~~~~g 547 (794) T protein:vir:22 468 TSIHRYYAVQDVSSVKNAEDITSHVPNYIPNGVFSICGSGTENFCSVLSHGDPSKIFMYKFLYLNEELRQQSWSHWDFGE 547 (794) T ss_pred eEEEEeEeeecccCceehhhHHHHHHHhcCCceEEEEEeCCCCcEEEEEEcCCCEEEEEEEeecCCceeEEeeEEEEcCC Confidence 46788999999999999999999999986666667788889999999999999999997 888899999999999 Q ss_pred ceEEEEEEeeCCCCEEEEEEEECCCCceEEEEeeccCccccccccceEeecceeec--------cCcceee-----ccCC Q lcl|Aclame:pro 468 VFESCAVVAEGNEDRLYAVVRRTIGGNEVRYVERMASRQFDAQADAFFVDSGLTYS--------GEPVSHI-----SGLE 534 (681) Q Consensus 468 ~~~~v~~~~~~~~d~l~~~v~r~~~g~~~~~ie~~~~~~~~~~~~~~~lD~~~~y~--------~~~~~~~-----~gl~ 534 (681) .|+++|+.. .+|+||++|+|+++++..||.|+++...+....+.+||||+.+|. +.+.+++ .+++ T Consensus 548 ~~~~~~~~~--~~d~l~~iv~r~~~~~~~r~~~~~~~~~~~~~~~~~~lD~~~~~~~~~g~~~~~~~~t~~~~~~~~g~~ 625 (794) T protein:vir:22 548 NVQVLACQS--ISSDMYVILRNEFNTFLARISFTKNAIDLQGEPYRAFMDMKIRYTIPSGTYNDDTFTTSIHIPTIYGAN 625 (794) T ss_pred CEEEEEEEe--cCCEEEEEEEeCCCEEEEEEEEeeccccCCCccceeeeeeeEEEeeccceeecCCcceEEEcccccCcc Confidence 999999865 478999999999999999999999988887788888999976653 3344443 6899 Q ss_pred ccCCcEEEEEeCCeeeccEeecCC-------EEEeCCCCCeEEEeeecceeEEecceEecCCCccccc-----ceeEEEE Q lcl|Aclame:pro 535 HLEGKTVSILADGAVHPQRVVTDG-------AIDLDVEAGTVHIGLPITAELQTLPVAMQLDGSFGQG-----RVKNINK 602 (681) Q Consensus 535 ~l~G~~v~v~adG~~~~~~~v~~g-------~i~l~~~~~~v~vG~~y~~~v~~~p~~~~~~~~~~~~-----~~~~i~r 602 (681) |++|+++.+.+||..+....+.++ .|.++.++++|+||++|+++++++||+++.+++..++ +|+||+| T Consensus 626 ~~~g~~v~~~~dg~~~~~~~~~~~~~~~~~~~v~~~~~~~~v~VGl~y~s~~~~~~~~~~~~~~~~~~~~~~~grl~l~r 705 (794) T protein:vir:22 626 FGRGKITVLEPDGKITVFEQPTAGWNSDPWLRLSGNLEGRMVYIGFNINFVYEFSKFLIKQTADDGSTSTEDIGRLQLRR 705 (794) T ss_pred cccceEEEEEcCCceeeceeeeeeeeccceEEeCCCCCCcEEEEeeeeeEEEEecceEEEecCCCccceeeecceEEEEE Confidence 999999999999998776665543 3444678999999999999999999999887775543 5789999 Q ss_pred EEEEEeccccEEEecCCCeeE-Eeeeeccccc------CCcCCcccceEEEEecCCcCcceEEEEEECCccCEEEEEEEE Q lcl|Aclame:pro 603 LWLRVHRSSGIFAGPHADALT-EVKQRTSEPY------GSPPALKSEEIPLVLSPKWGDSGQLFVRQADPLPLMIVSMSA 675 (681) Q Consensus 603 v~l~~~~S~~~~v~~~~~~~~-~~~~~~~~~~------~~~~~~~tG~~~v~~~~~~~~~~~v~I~~~~P~P~tvlai~~ 675 (681) +++++.+|+++.+.++..... .+. +.+..+ .+.+++.+|.+++|+. +|+++.+|+|+|+.|+||+|+||+| T Consensus 706 ~~~~~~~tg~~~v~v~~~~~~~~~~-~~~~~~g~~~~~~g~~~~~tg~~~vp~~-~~~~~~~v~i~~d~p~P~tvlsi~~ 783 (794) T protein:vir:22 706 AWVNYENSGTFDIYVENQSSNWKYT-MAGARLGSNTLRAGRLNLGTGQYRFPVV-GNAKFNTVYILSDETTPLNIIGCGW 783 (794) T ss_pred EEEEeccccceEEEEcCCCccccee-ecCceecccccccCcccccCceEEEEec-ccCceEEEEEEECCCCCEEEEEEeE Confidence 999999999999987654321 221 222222 2346788999999985 6899999999999999999999999 Q ss_pred EEEEcC Q lcl|Aclame:pro 676 EIAIGA 681 (681) Q Consensus 676 ev~vg~ 681 (681) |....= T Consensus 784 eg~y~~ 789 (794) T protein:vir:22 784 EGNYLR 789 (794) T ss_pred EEEEec Confidence 998887 No 12 >protein:vir:10452 Length: 794 # NCBI annotation: tail protein # Family: family:all:825 # MgeID: mge:184 # MgeName: phiA1122 # Cross-refs: genbank:acc:NP_848299;genbank:gi:30387490;genbank:GeneID:1733952 Probab=100.00 E-value=1e-162 Score=908.65 Aligned_cols=665 Identities=14% Similarity=0.136 Sum_probs=525.9 Q ss_pred CCcceEeecccccccccchhcccchHHHHHHHHhhhhccEEeeccCeeeCCchheeeecCCCc--CceEEEEEEe-CCCC Q lcl|Aclame:pro 1 MSNVRVLQRSFGGGEISPEMFGRIDDVKYQSGLAICRNFVVKPQGPAENRAGFAFVREVKDSA--KKVRLIPFTY-SVTQ 77 (681) Q Consensus 1 M~~~~~~q~~f~~GElsP~l~~R~D~~~y~~~~~~~~N~~~~~~Gg~~rRpG~~~v~~~~~~~--~~~rlipf~~-~~~~ 77 (681) ||++...++||.+| +++|+|++||++||++|+||+++|+||++||||++||+++++.. .+.++++|.+ ++.+ T Consensus 1 M~~i~~s~~n~~~G-----vSqq~D~~Ry~~q~~~~~N~~~~~~gG~~rRpGt~fv~~l~~~~~~~~~~~~~~~~rd~~e 75 (794) T protein:vir:10 1 MALISQSIKNLKGG-----ISQQPDILRYPDQGSRQVNGWSSETEGLQKRPPLVFLKTLGDNGALGQAPYIHLINRDENE 75 (794) T ss_pred Ccceeeecchhhcc-----cccCCchHHhhhhHhhhhcceeeeccCcccCcchhhheeccCCCccccceeeeEEecCCCc Confidence 99999999999999 89999999999999999999999999999999999999998764 4556777765 5778 Q ss_pred eEEEEEcCCEEEEEeCCcEEeeCCEEEEEeCCCC--chhhceeeEEEeccEEEEEcCCcceEEEEECC------CCcEEE Q lcl|Aclame:pro 78 TMVIELGAGYFRFHTNGGTLLDGAVPYEIANPYA--EADLFNIHYVQSADVLTLVHPNYAPRELRRLG------ATNWQL 149 (681) Q Consensus 78 ~y~lefg~~~irv~~~~~~v~~~~~~~~i~TPy~--~a~l~~l~~~qsaD~l~lvh~~~~p~~l~R~~------~~~W~~ 149 (681) .|+|+|++++||||+.+|... .+.++..+||. +.++.+|+|+|+||+|||||++++|++..+.. ...|.+ T Consensus 76 ~~~v~~~~~~irv~~~~G~~~--~v~~~~~~~Y~~aa~~~~~l~~~q~aD~~fivn~~~~~~~~~~~~~~~~~~~~~~~~ 153 (794) T protein:vir:10 76 QYYAVFTGTGIRVFDLAGNEK--QVRYPNGSNYIKTANPRSDLRMVTVADYTFIVNRNVVVQKDPNSVNLANYNPKQDGL 153 (794) T ss_pred eEEEEEeCCeEEEEEcCCcEE--EEEcCCCCcceecCCCcceEEEEEEcCEEEEEcCCeeeeeeccccccCCCCCCccEE Confidence 888899999999998665211 12345667774 34678899999999999999999999865532 335555 Q ss_pred EEEe---e----ccCccc--------ccccc----eeee-------------cCcceeeEE-----EEEEEEEe------ Q lcl|Aclame:pro 150 ATIA---F----TSPVAT--------PTSVT----ATSN-------------NKGTDYTYR-----YVVTALDA------ 186 (681) Q Consensus 150 ~~~~---f----~~~~~~--------~~~~t----~t~~-------------~~~~~~t~~-----~~v~a~~~------ 186 (681) ..+. | ...... +.+.+ ..+. .....++.. ..+.+... T Consensus 154 ~~v~~g~y~r~y~i~i~~~~~at~~tpdgt~~~~~~~~s~~~ia~~L~~~l~a~~~g~t~~~~g~~i~i~a~s~~~~~t~ 233 (794) T protein:vir:10 154 INIRGGQYGRELIVHINGKDVATYKIPDGSKPEHVNNTDAQWLAERLAKQMRINLSGWTVNVGQGFIHVTAPSGQQIDSF 233 (794) T ss_pred EEecccccceEEEeccCCcceeEEEecCCCCcccceecchhhhhhhhhhhhhcccCCceEEeCCeEEEEEeccCceeccc Confidence 4331 1 000000 00000 0000 000000000 00000000 Q ss_pred -----------------------------ccceEEecCcccceeccceeccceeeeEEeeccCCceeeeecccceeEEEe Q lcl|Aclame:pro 187 -----------------------------EGKTESAPSSAGTCTNNLFTNGGANTIAWSASSGASRYNVYKEQGGLYGYI 237 (681) Q Consensus 187 -----------------------------~g~~~s~~s~~~t~~~~~~~~~~~~~~~w~a~~~~~~~~v~~~~~~~~~~~ 237 (681) +|.............+.+|.........|.++.+......+...++++..+ T Consensus 234 s~~~~~~~~~~~~v~~~~~~~~~lp~~~~~G~~v~i~~~~~~~~~~yyv~~~~~~~~w~E~~~~g~~~~~~~~tmP~~l~ 313 (794) T protein:vir:10 234 TTKDGYADQLINPVTHYAQSFSKLPPNAPNGYMVKIVGDASKSADQYYVRYDAERKVWTETLGWNTENQVLLETMPHALV 313 (794) T ss_pred cccCCcCcceeEEEEeccCcceecccCCCCCcEEEEEeCCCCCcceeEEEEEcCCcEEEEecccceeEEEecccceeEEE Confidence 011111111112222334445455556788877776666666778888888 Q ss_pred eccceeEEEeccccccccccccccccCccccCCceeEEEEEcCeEEEEecCCCccEEEEEeccChhcccccC--CCcCCc Q lcl|Aclame:pro 238 GQTTGTSLVDDNIAPDLSVTPPIYDAVFNAAGDYPAAVSYFEQRRCFAGTTNKPQNIWMTRSGTESAMSYSL--PVRDDD 315 (681) Q Consensus 238 ~~~~~t~~~~~~~~~~~~~~~~~~~~~~s~~~g~p~~v~f~~~RL~~~~~~~~p~~v~~S~~gd~~nF~~~~--~~~D~D 315 (681) ..+.++.......|.++.+++..++|.+|+.+.+|++|+||||||+|++ ||+|||||+||||||++++ +++||| T Consensus 314 r~~~~t~~~~~~~w~~r~~Gd~~tnp~psf~g~~~~~v~f~q~RL~f~~----~~~v~~Srtgd~~nF~~~t~~~~~DdD 389 (794) T protein:vir:10 314 RAADGNFDFKWLEWSPKSCGDVDTNPWPSFVGSSINDVFFFRNRLGFLS----GENIILSRTAKYFNFYPASIANLSNDD 389 (794) T ss_pred EeccceEEeeecccccccccccccCccCcccCCCccEEEEEcceEEEee----CCeEEEEecCCcccccccccccCCCCc Confidence 8888888777778999999999999999999999999999999999995 7999999999999999985 468999 Q ss_pred cEEEEEcCCCceEEEEEeecC-cEEEEecCcEEEEecCCCcccccceeEEEEeeccCCc-ccccEEeCCeEEEEEcCCCE Q lcl|Aclame:pro 316 RVAFRVAAREANAIRHIVPLT-ELLLLTSSGEWRVASVNSDAVTPTTISVRPQSYVGAT-DVQPVVVNNTTIYGAARGGH 393 (681) Q Consensus 316 ~i~~~~~~~~~~~i~~~~~~~-~Llv~t~~~e~~~~~~~~~~ltP~~~~~~~~s~~g~~-~~~Pv~vg~~v~fv~~~g~~ 393 (681) ||+++++++++++|+|+++++ +|+|||+++||+|++ +++|||+|++++++|+|+++ .|+|+.+|++++|+|++|++ T Consensus 390 ~I~~~~ss~~~~~i~~~v~~~~~L~i~T~~~q~~l~~--~~~lTP~~~~~~~~s~~~~~~~~~Pv~vg~~v~f~~~~g~~ 467 (794) T protein:vir:10 390 PIDVAVSTNRIAILKYAVPFSEELLIWSDEAQFVLTA--SGTLTSRSVELNLTTQFDVQDRARPYGIGRNVYFASPRSSY 467 (794) T ss_pred cEEEEecCCcceeeEEEeecCCcEEEEecCcEEEEeC--CCcccceeEEEEEEEeecccCCCCceEeCCeEEEEecCCCe Confidence 999999999999999999996 799999999999987 45999999999999999985 59999999999999999963 Q ss_pred ---EEEEEEeeeccceeccchhhhhHHhcCCCCEEEEEEecCCCEEEEEEcCCCeEEEEEEe---cccceEEEEEeccCC Q lcl|Aclame:pro 394 ---VRELAYNWQANGFVTGDLSLRAAHLFDNLDILDMAYAKAPQPIVWFISSSGKLLGLTYV---PEQQIGAWHQHDTDG 467 (681) Q Consensus 394 ---vre~~~~~~~~~~~~~dlt~~~~hl~~~~~~~~~~~~~~p~~~~~~~~~dg~l~~~ty~---~~q~v~aW~~w~~~g 467 (681) +|+++|++.+|+|+++|||+|++||+++..+..++++++|..++|++.+||+|++|+|+ +||+|+|||||+|+| T Consensus 468 ~~~~r~~~~~~~~d~y~a~Dlt~~~~hl~~~~v~~~~~~~~~~~~~~~~~~~~~~l~~~~y~~~~~e~~v~aW~~~~~~g 547 (794) T protein:vir:10 468 TSIHRYYAVQDVSSVKNSEDITSHVPNYIPNGVFSICGSGTENFCSVLSHGDPSKIFMYKFLYLNEELRQQSWSHWDFGE 547 (794) T ss_pred eEEEEEeeeccccCceehhhHHHHHHHhcCCceEEEEEeCCCCcEEEEEEcCCCEEEEEEEeecCCceEEEeEEEEEcCC Confidence 46678999999999999999999999986666777888899999999999999999997 788899999999999 Q ss_pred ceEEEEEEeeCCCCEEEEEEEECCCCceEEEEeeccCccccccccceEeecceeeccCc--------c-----eeeccCC Q lcl|Aclame:pro 468 VFESCAVVAEGNEDRLYAVVRRTIGGNEVRYVERMASRQFDAQADAFFVDSGLTYSGEP--------V-----SHISGLE 534 (681) Q Consensus 468 ~~~~v~~~~~~~~d~l~~~v~r~~~g~~~~~ie~~~~~~~~~~~~~~~lD~~~~y~~~~--------~-----~~~~gl~ 534 (681) .++++|+.. .+|+||++|+|+++++..||.|+++...+....+++||||+++|.... . .++.|++ T Consensus 548 ~~~~~~~~~--~~d~l~~iv~r~~~~~~~r~~~~~~~~~~~~~~~~~~lD~~~~~~~~~~~~~~~~~~t~~~~~~~~g~~ 625 (794) T protein:vir:10 548 NVQVLACQS--ISSDMYVILRNEFNTFLARISFTKNAIDLQGEPYRAFMDMKIRYTIPSGTYNDDTFTTSIHIPTIYGAN 625 (794) T ss_pred cEEEEEEEe--cCCeEEEEEEeCCCEEEEEEEEeecCCCCCCccceeeeecceEEEecCcccccccccceEEcccccCcc Confidence 999999865 468999999999999999999999988888888899999999876432 1 2356899 Q ss_pred ccCCcEEEEEeCCeeecc---EeecCCE----EEeCCCCCeEEEeeecceeEEecceEecCCCccccc-----ceeEEEE Q lcl|Aclame:pro 535 HLEGKTVSILADGAVHPQ---RVVTDGA----IDLDVEAGTVHIGLPITAELQTLPVAMQLDGSFGQG-----RVKNINK 602 (681) Q Consensus 535 ~l~G~~v~v~adG~~~~~---~~v~~g~----i~l~~~~~~v~vG~~y~~~v~~~p~~~~~~~~~~~~-----~~~~i~r 602 (681) |++|++|.+++||..... ..+.+|. +.++.++++|+|||+|+++++++||+++.+++..++ +++||+| T Consensus 626 ~~eg~~v~~~adg~~~~~~~~~~~~~g~~~l~i~~~~~a~~v~vGl~y~s~~~~~~~~i~~~~~~~~~~~~~~gr~~l~r 705 (794) T protein:vir:10 626 FGRGKITVLEPDGKITVFEQPTSGWQSDPWLRLSGNLEGREVFIGFNINFVYEFSKFLIKQTTDDGSTSTEDIGRLQLRR 705 (794) T ss_pred cccccEEEEecCCceeeeeeeeeeeecceEEEecCCCCCceEEEeeeeeEEEEecceEEEccCCCcceeeeccccEEEEE Confidence 999999999999975432 3333443 234577999999999999999999999988876654 5789999 Q ss_pred EEEEEeccccEEEecCCCeeEE------eeeecccccCCcCCcccceEEEEecCCcCcceEEEEEECCccCEEEEEEEEE Q lcl|Aclame:pro 603 LWLRVHRSSGIFAGPHADALTE------VKQRTSEPYGSPPALKSEEIPLVLSPKWGDSGQLFVRQADPLPLMIVSMSAE 676 (681) Q Consensus 603 v~l~~~~S~~~~v~~~~~~~~~------~~~~~~~~~~~~~~~~tG~~~v~~~~~~~~~~~v~I~~~~P~P~tvlai~~e 676 (681) +++++.+|+++.+.++....+. ......+...+++++.||.+++|+. +|+++.+|+|+|++|+||+|+||+|| T Consensus 706 ~~~~~~~tg~~~v~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~~tg~~~vp~~-g~~~~~~v~i~~d~P~P~tvlsi~~e 784 (794) T protein:vir:10 706 AWVNYEDSGTFDIYVENQSSNWKYTMAGARLGSNTLRAGRLNLGTGQYRFPVV-GNAKFNTVYILSDETTPLNIIGCGWE 784 (794) T ss_pred EEEEeeccccEEEEEcCCccccceeeccceeccccccccccccccceEEEEec-ccCceEEEEEEECCCCceEEEEEEEE Confidence 9999999999999876543221 1222233444667889999999985 58999999999999999999999999 Q ss_pred EEEcC Q lcl|Aclame:pro 677 IAIGA 681 (681) Q Consensus 677 v~vg~ 681 (681) ....= T Consensus 785 g~y~~ 789 (794) T protein:vir:10 785 GNYLR 789 (794) T ss_pred EEEec Confidence 99888 No 13 >protein:vir:80253 Length: 777 # NCBI annotation: putative tail tubular protein B # Family: family:all:825 # MgeID: mge:1879 # MgeName: LKA1 # Cross-refs: genbank:acc:YP_001522886;genbank:gi:158345179;genbank:GeneID:5687516 Probab=100.00 E-value=1.7e-162 Score=907.47 Aligned_cols=654 Identities=12% Similarity=0.084 Sum_probs=498.2 Q ss_pred CCcceEeecccccccccchhcccchHHHHHHHHhhhhccEEeeccCeeeCCchheeeecCCCc---CceEEEEEEeCCCC Q lcl|Aclame:pro 1 MSNVRVLQRSFGGGEISPEMFGRIDDVKYQSGLAICRNFVVKPQGPAENRAGFAFVREVKDSA---KKVRLIPFTYSVTQ 77 (681) Q Consensus 1 M~~~~~~q~~f~~GElsP~l~~R~D~~~y~~~~~~~~N~~~~~~Gg~~rRpG~~~v~~~~~~~---~~~rlipf~~~~~~ 77 (681) ||++...++||++| +++|+|++||++||++|+||+++|+||++||||++||+++++.+ ...|+|||.++++| T Consensus 1 M~~i~~~~~nf~~G-----vS~q~D~~ry~~q~~~~~N~~~~~~gG~~rRpGt~fv~~l~~~~~~~~~~~~~~~~~~~e~ 75 (777) T protein:vir:80 1 MSYFAGSYRQLLFG-----VSQQTAKDRLEGQVESQLNMQSDLVTGPRRRSPVHLIADAMAATDANRLAYSLATFSGREV 75 (777) T ss_pred Cceeeeecchhhcc-----cccCCchHHhhhHHhhhhcceeeeccCceeCcchHhhhhhcCCCcccceeEEEEecCCCee Confidence 99999999999999 89999999999999999999999999999999999999988543 56788999999999 Q ss_pred eEEEEEcCCEEEEEeC-CcEE-eeCCEEEEEeCCCCchhhceeeEEEeccEEEEEcCCcceEEEEECCCCc-EEEEEEee Q lcl|Aclame:pro 78 TMVIELGAGYFRFHTN-GGTL-LDGAVPYEIANPYAEADLFNIHYVQSADVLTLVHPNYAPRELRRLGATN-WQLATIAF 154 (681) Q Consensus 78 ~y~lefg~~~irv~~~-~~~v-~~~~~~~~i~TPy~~a~l~~l~~~qsaD~l~lvh~~~~p~~l~R~~~~~-W~~~~~~f 154 (681) +|+|||++++||||+. +|.+ ..++.+|. ++.+..+|+|+|+||+|||||++++|+++.|.+++. |......| T Consensus 76 ~~~l~~g~g~irv~~~~~g~~~~~~~~~Yl-----~a~~~~~l~~~q~aD~~fi~n~~~~p~~~~~~~~~~~~~~~~~~~ 150 (777) T protein:vir:80 76 LLLVDTLDGTLTILDDATGEVLFTGTNSYL-----TAGTGRSIRFAALDDSVFVANTEVIPQTQLWSGASAYPDPTRAGY 150 (777) T ss_pred EEEEEecCCeEEEEECCCCeEEEecCCCce-----eeccccceeEEEEcCEEEEEeCCccceeeecccCCCccCcccceE Confidence 9999999999999965 3333 33333333 344566899999999999999999999999887653 44332221 Q ss_pred ccCcc-----------cccc--cceeeecCc-----ceee----EEE--------------EEEEEEeccceEEecCcc- Q lcl|Aclame:pro 155 TSPVA-----------TPTS--VTATSNNKG-----TDYT----YRY--------------VVTALDAEGKTESAPSSA- 197 (681) Q Consensus 155 ~~~~~-----------~~~~--~t~t~~~~~-----~~~t----~~~--------------~v~a~~~~g~~~s~~s~~- 197 (681) ..... .... .+.+...+. .... ... ....+...+......... T Consensus 151 ~~v~~~~~g~~y~i~i~~~~~~~~~t~~~~t~~~~~~~~~~~~ia~~L~~~~~~~~~~~s~~~~~~~~~g~~~~i~~~~~ 230 (777) T protein:vir:80 151 LYVVAGAFSKQYRLSITNQVTGVTTSVDVTTSATEASQATGEYVITQLRTAAEADATIGTAAGFAYYQDGAYLYVTAPEA 230 (777) T ss_pred EEeeccCCCceeeEeecCCcCceeEEEecCCcccccccccchhhhhhhhhhhccccceeecCceEEEeCCcEEEEEecCc Confidence 10000 0000 000000000 0000 000 000000000000000000 Q ss_pred ccee----ccce------------------eccceeeeEEeeccCCceeeeecccceeEE-----------------Eee Q lcl|Aclame:pro 198 GTCT----NNLF------------------TNGGANTIAWSASSGASRYNVYKEQGGLYG-----------------YIG 238 (681) Q Consensus 198 ~t~~----~~~~------------------~~~~~~~~~w~a~~~~~~~~v~~~~~~~~~-----------------~~~ 238 (681) ...+ .+.. ..+......+.+..+..+|..|....+.|. ++. T Consensus 231 ~~~t~~~g~~~~~~~~~~~v~~~~~lp~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~w~e~~~~~~~~~~~t~p~~l~~ 310 (777) T protein:vir:80 231 IAVSTDSGSNFLRASNAASIRDAAELPAKLPADADGFIIATGAAKNKTYFRWVDLERKWDEDASRGAQAELIDMPLRITY 310 (777) T ss_pred eeEecCCcCccceeeeeEEEeeccccccccccccceEEEeCCCCCCceEEEEEccCcEEEEeecccccccccccceEEEe Confidence 0000 0000 000011222333333334444444333332 222 Q ss_pred ccceeEEEeccccccccccccccccCccccCCceeEEEEEcCeEEEEecCCCccEEEEEeccChhcccccC--CCcCCcc Q lcl|Aclame:pro 239 QTTGTSLVDDNIAPDLSVTPPIYDAVFNAAGDYPAAVSYFEQRRCFAGTTNKPQNIWMTRSGTESAMSYSL--PVRDDDR 316 (681) Q Consensus 239 ~~~~t~~~~~~~~~~~~~~~~~~~~~~s~~~g~p~~v~f~~~RL~~~~~~~~p~~v~~S~~gd~~nF~~~~--~~~D~D~ 316 (681) . ..+.......|.++.++++.++|.||+.+.+|++|+||||||+|++ ||+|||||+||||||++++ +++|||| T Consensus 311 ~-~~~~~~~~~~w~~r~~gd~~tn~~Psf~g~~i~~v~f~q~RL~f~~----~~~v~~Srtgd~~nF~~~s~~~~~DdDp 385 (777) T protein:vir:80 311 S-APNFSLTALNYERRASGDATSNPALKFTEQGISGMTTMQGRLVLLA----GEYVCMSASGNPLRWFRASVSTQSDDDP 385 (777) T ss_pred c-CCceEeeccCCccccccccccCCCceecCCceeEEEEEcceeeeec----CCeEEEEeccCccccccccccCCCCCcc Confidence 1 2244445555788889999999999999999999999999999995 7899999999999999975 6789999 Q ss_pred EEEEEcCCCceEEEEEeecC-cEEEEecCcEEEEecCCCcccccceeEEEEeeccCC-cccccEEeCCeEEEEEc-CCC- Q lcl|Aclame:pro 317 VAFRVAAREANAIRHIVPLT-ELLLLTSSGEWRVASVNSDAVTPTTISVRPQSYVGA-TDVQPVVVNNTTIYGAA-RGG- 392 (681) Q Consensus 317 i~~~~~~~~~~~i~~~~~~~-~Llv~t~~~e~~~~~~~~~~ltP~~~~~~~~s~~g~-~~~~Pv~vg~~v~fv~~-~g~- 392 (681) |+++++++++|+|+|+++++ +|+|||+++||+|++ +++|||+|++++++|.|++ +.|+|+.+|++++|+++ .|+ T Consensus 386 I~~~~ss~~~~~i~~~v~~~~~L~i~T~~~e~~l~~--~~~lTP~~~~~~~~s~~~~~~~~~Pv~vG~~v~Fv~~r~g~~ 463 (777) T protein:vir:80 386 IEVAATAPVASPYEYAVAFNKDLVLFAKTHQGLVPG--ANLLTSRNATAAVVTEYSFQNSCSPVVAGRTVFFASPRSGPW 463 (777) T ss_pred EEEEEcCCcceeeeeeeecCCcEEEEecCceEEEeC--CCcccceeEEEEEEEeeccCCCCCceEeCCeEEEEecCCCce Confidence 99999999999999999985 799999999999987 4699999999999999976 57999999999999975 454 Q ss_pred -EEEEEEEe-eeccceeccchhhhhHHhcCCCCEEEEEEecCCCEEEEEEcCCCeEEEEEEe---cccceEEEEEeccCC Q lcl|Aclame:pro 393 -HVRELAYN-WQANGFVTGDLSLRAAHLFDNLDILDMAYAKAPQPIVWFISSSGKLLGLTYV---PEQQIGAWHQHDTDG 467 (681) Q Consensus 393 -~vre~~~~-~~~~~~~~~dlt~~~~hl~~~~~~~~~~~~~~p~~~~~~~~~dg~l~~~ty~---~~q~v~aW~~w~~~g 467 (681) +||||+|+ +++|+|+++|||+|++||+++ ++.+|++|++|++++|++++||+|++|+|+ +||+|+|||||+|+| T Consensus 464 s~v~e~~~~~~~~d~y~a~Dlt~~~~hl~~~-~v~~~a~s~~p~~v~~~~~~dg~l~~~ty~~~~~e~~v~aW~r~~~~g 542 (777) T protein:vir:80 464 SAVWEMLPSQYTDAQVEASDSTSHLPKYIAG-PVRFLATSSTTSIVVVGTSNLRELVVHEYLWQGGEKVHAAWHKWSFPQ 542 (777) T ss_pred eEEeeeeecccccCceehhHHHHHHHHhcCC-ceEEEEEcCCCceEEEEEcCCCeEEEEEEeecCCceEEEeeEEeccCC Confidence 79999998 688999999999999999997 799999999999999999999999999997 788899999999999 Q ss_pred ceEEEEEEeeCCCCEEEEEEEECCCCceEEEEeeccCccccc--cccceEeec----ceeeccCcceeeccCCccCCcEE Q lcl|Aclame:pro 468 VFESCAVVAEGNEDRLYAVVRRTIGGNEVRYVERMASRQFDA--QADAFFVDS----GLTYSGEPVSHISGLEHLEGKTV 541 (681) Q Consensus 468 ~~~~v~~~~~~~~d~l~~~v~r~~~g~~~~~ie~~~~~~~~~--~~~~~~lD~----~~~y~~~~~~~~~gl~~l~G~~v 541 (681) +|++||++ +|.||++|+|+. .+|||+|+.....+ .++.+|+|| +.+|++.+..+..+++|+.+.+. T Consensus 543 ~v~~v~~i----~d~l~~iv~r~~----~~~le~~~~~~~~d~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 614 (777) T protein:vir:80 543 DITGAYFR----GDRLILLFHVAG----RVILGELFMQRLGDAQSIPGGFLDLYRVGAANADEEVAIPAFAADLYPEDST 614 (777) T ss_pred cEEEEEEE----CCEEEEEEEcCC----eEEEEEEeeccCCCCcccceeeeeeeeeeeeeeCCccceeEeeccccCCcce Confidence 99999997 789999999963 69999998766543 345789998 67788888888888888776665 Q ss_pred EEEe-CCe----------eeccEeecCCEEEeCCCCCeEEEeeecceeEEecceEecCCCccccc-ceeEEEEEEEEEec Q lcl|Aclame:pro 542 SILA-DGA----------VHPQRVVTDGAIDLDVEAGTVHIGLPITAELQTLPVAMQLDGSFGQG-RVKNINKLWLRVHR 609 (681) Q Consensus 542 ~v~a-dG~----------~~~~~~v~~g~i~l~~~~~~v~vG~~y~~~v~~~p~~~~~~~~~~~~-~~~~i~rv~l~~~~ 609 (681) ..++ +|. ...+..+..+.|+++.++++|+||++|+++++|+||+++.++|..++ +|+||+|++|++.+ T Consensus 615 ~~v~~~~~~~~~~~~~~~v~~~~~~~~~~v~~~~~~~~v~VGl~y~s~~~~~~~~~~~~~g~~~~~~r~~i~r~~~~~~~ 694 (777) T protein:vir:80 615 FAYKLSGEFQSLGQRCGDRRVDGATVYIKVVGAQAGDQYRIGLRYLSKLGPTRPILRDPNGVPITTERTQLHRLTWSLDS 694 (777) T ss_pred eEEEecCcccccceeeeeEEeCCceeeEEEcCCCCCCEEEEeeeeEEEEEeCceEEeCCCCceeeecCeEEEEEEEEeec Confidence 5554 332 11122223456788889999999999999999999999988887776 57899999999999 Q ss_pred cccEEEecCCCeeEEeeee-cc------cccCCcCCcccceEEEEecCCcCcceEEEEEECCccCEEEEEEEEEEEEcC Q lcl|Aclame:pro 610 SSGIFAGPHADALTEVKQR-TS------EPYGSPPALKSEEIPLVLSPKWGDSGQLFVRQADPLPLMIVSMSAEIAIGA 681 (681) Q Consensus 610 S~~~~v~~~~~~~~~~~~~-~~------~~~~~~~~~~tG~~~v~~~~~~~~~~~v~I~~~~P~P~tvlai~~ev~vg~ 681 (681) |+++.+++++....++.++ .+ +...+.|+++||++++|+. +|+++.+|+|+|++|+||+|+||+||....= T Consensus 695 sg~~~v~v~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~tg~~~vp~~-~~~~~~~v~i~~d~P~P~tilsi~~e~~y~~ 772 (777) T protein:vir:80 695 TGEVTFRVADQARGESAYTTTPLRLYSRDLGAGLPLAATATLDTPAR-VDMQTAQFSLETDDYYDMNITSLEYGFRYNQ 772 (777) T ss_pred cccEEEEEcCCCCcceeeeecCceecccccccccccccceEEEEEEe-ecCcceEEEEEECCCCceEEEEEEEEEEeec Confidence 9999998766655444332 22 2233457889999999975 6899999999999999999999999999998 No 14 >protein:vir:1543 Length: 801 # NCBI annotation: tail tubular protein B # Family: family:all:825 # MgeID: mge:31 # MgeName: phiYeO3-12 # Cross-refs: genbank:acc:NP_052111;swissprot:trembl:q9t105;genbank:gi:9634037;uniprot:Q9T105;genbank:GeneID:1262408 Probab=100.00 E-value=3.7e-161 Score=900.14 Aligned_cols=662 Identities=11% Similarity=0.135 Sum_probs=518.3 Q ss_pred CCcceEeecccccccccchhcccchHHHHHHHHhhhhccEEeeccCeeeCCchheeeecCCCcC---ceEEEEEEeCCCC Q lcl|Aclame:pro 1 MSNVRVLQRSFGGGEISPEMFGRIDDVKYQSGLAICRNFVVKPQGPAENRAGFAFVREVKDSAK---KVRLIPFTYSVTQ 77 (681) Q Consensus 1 M~~~~~~q~~f~~GElsP~l~~R~D~~~y~~~~~~~~N~~~~~~Gg~~rRpG~~~v~~~~~~~~---~~rlipf~~~~~~ 77 (681) ||++...++||.+| +++|.|++||++||++|+||+++|+||++||||++||+.+++... ..++++|.|+++| T Consensus 1 M~~i~~s~~n~~~G-----vSqq~d~~r~~~q~~~~~N~~~~~~gGl~rRpGt~~va~~~~~~~~~~~~~~~~~~~~~~e 75 (801) T protein:vir:15 1 MALISQSIKNLKGG-----ISQQPDILRFAEQGSVQINGWSSESEGLQKRPPMIHLKTLGPAGYVGAQPYVHLINRDEFE 75 (801) T ss_pred Cceeeeecchhhcc-----eecCcchHhhhhhHhhhhcceeccccCcccCCchheeeeecCCCCcccceeEEEEEeCCce Confidence 99999999999999 889999999999999999999999999999999999999987542 3566778899999 Q ss_pred eEEEEEcCCEEEEEeCCcEEeeCCEEEEEeCCCCc--hhhceeeEEEeccEEEEEcCCcceEEEEEC------CCCcEEE Q lcl|Aclame:pro 78 TMVIELGAGYFRFHTNGGTLLDGAVPYEIANPYAE--ADLFNIHYVQSADVLTLVHPNYAPRELRRL------GATNWQL 149 (681) Q Consensus 78 ~y~lefg~~~irv~~~~~~v~~~~~~~~i~TPy~~--a~l~~l~~~qsaD~l~lvh~~~~p~~l~R~------~~~~W~~ 149 (681) +|+|||++++||||+.+|..+ .++..+||.. ....+|+++|+||++||+|++++|+.+.|. .+..|-+ T Consensus 76 ~y~l~~~~~~irv~~~~G~~~----~v~~~~~y~~~~~~~~~l~~~~~aD~~fi~nr~~~~~~~~~~~~~~~~~~~~~al 151 (801) T protein:vir:15 76 QYFVVFTGEDIKVFDLDGKEY----QVRGDRSYVRTANPREDLRMITVADYTFVTNRKVVVQSNDQSVNLPGFKDQGDAL 151 (801) T ss_pred EEEEEEcCCeEEEEccCCcEE----EEecCCccccccCchhheeEEEEcCEEEEeeCCeeeecccCccccCccCCCCceE Confidence 999999999999998666322 2344445532 335679999999999999999999988663 3344655 Q ss_pred EEEe-----------eccCcc----ccccc----------ceee----------------ecCcceeeEEEE-----E-- Q lcl|Aclame:pro 150 ATIA-----------FTSPVA----TPTSV----------TATS----------------NNKGTDYTYRYV-----V-- 181 (681) Q Consensus 150 ~~~~-----------f~~~~~----~~~~~----------t~t~----------------~~~~~~~t~~~~-----v-- 181 (681) ..+. ...... .+.+. ...+ ......++.... . T Consensus 152 v~v~~~~yg~t~~I~i~gs~~~~~t~~~gs~~~~~~~~s~~~ia~~l~~~~~~~~p~~~~~~~~~~w~~~~~~g~~~i~a 231 (801) T protein:vir:15 152 INVRGGQYGRRLSIEFNGAERAAVQLPDGSQPAHVNEVDGQAIAEKLAAQLRNNLGNPNNDQDPNKWRFNVGPGFIHILA 231 (801) T ss_pred EEeeeccCceeEEEEeCCcceEEEEeccCcccchhhhcceeechHHHhhhhhhccCccceeccCccEEEEecCcEEEEeC Confidence 4332 111000 00000 0000 000001111000 0 Q ss_pred ---------EEEEe------------------------ccceEEecCcccceeccceeccceeeeEEeeccCCceeeeec Q lcl|Aclame:pro 182 ---------TALDA------------------------EGKTESAPSSAGTCTNNLFTNGGANTIAWSASSGASRYNVYK 228 (681) Q Consensus 182 ---------~a~~~------------------------~g~~~s~~s~~~t~~~~~~~~~~~~~~~w~a~~~~~~~~v~~ 228 (681) ...+. +|..............+++.........|.++.+........ T Consensus 232 ~~~~~~~~~~t~dg~~~~~~~~~~~~v~~~~~lp~~~~~G~~v~v~~~~~~~~~~y~v~~~~~~~~w~E~a~~g~~~~~~ 311 (801) T protein:vir:15 232 PNNDNVWGLQTKDGYADQLINPVTHYTQSFQKLPINAPDGYIVKIVGDTSKTADQYYVRFDLNRKVWVETIGWNTRTHLY 311 (801) T ss_pred CCCcccceeeeccccCceeeeEEeecccceeeeeeecCCCcEEEEEecCCCccceEEEEEEcCCeeEEeecccccceeee Confidence 00000 000000111111222344555555667888888877766677 Q ss_pred ccceeEEEeeccceeEEEeccccccccccccccccCccccCCceeEEEEEcCeEEEEecCCCccEEEEEeccChhccccc Q lcl|Aclame:pro 229 EQGGLYGYIGQTTGTSLVDDNIAPDLSVTPPIYDAVFNAAGDYPAAVSYFEQRRCFAGTTNKPQNIWMTRSGTESAMSYS 308 (681) Q Consensus 229 ~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~s~~~g~p~~v~f~~~RL~~~~~~~~p~~v~~S~~gd~~nF~~~ 308 (681) ..++.+.++..++++.......|.++.++++.++|.+++.+++|++|+||||||+|++ ||+|||||+||||||+++ T Consensus 312 ~~tmp~~lv~~~~~~~~~~~~~w~~r~~gd~~tnp~psf~g~~~~~v~f~q~RL~f~~----~~~v~~Srtgd~~nF~~~ 387 (801) T protein:vir:15 312 YHTMPWALVRASDGNFDFKVLEWGARTVGDDTTNPYPSFTGQTINDIFFFRNRLGFLS----GENIILSRTSKYFNFFPA 387 (801) T ss_pred ccccceEEEeeccceEEEeccccccccCCccccCCcccccCCCceEEEEEcceEEEee----CCeEEEEecCCccccccc Confidence 7788999998888888888888999999999999999999999999999999999995 799999999999999997 Q ss_pred C--CCcCCccEEEEEcCCCceEEEEEeecC-cEEEEecCcEEEEecCCCcccccceeEEEEeeccCCc-ccccEEeCCeE Q lcl|Aclame:pro 309 L--PVRDDDRVAFRVAAREANAIRHIVPLT-ELLLLTSSGEWRVASVNSDAVTPTTISVRPQSYVGAT-DVQPVVVNNTT 384 (681) Q Consensus 309 ~--~~~D~D~i~~~~~~~~~~~i~~~~~~~-~Llv~t~~~e~~~~~~~~~~ltP~~~~~~~~s~~g~~-~~~Pv~vg~~v 384 (681) + +++|||||+++++++++++|+|+++++ +|+|||+++||+|++ +++|||+|++++++|+|+++ .|+|+.+|+++ T Consensus 388 t~~~~~DdD~i~~~~~~~~~~~i~~~v~~~~~L~i~t~~~q~~ls~--~~~lTP~~~~~~~~s~~~~~~~~~Pv~vg~~v 465 (801) T protein:vir:15 388 SVSNYSDDDPIDVAVSHNRVSTLKYAVPFSEELLLWSDQAQFVLTA--SGILSSRSVELNLTTQFDVQDRARPHGVGRNV 465 (801) T ss_pred cccCCCCCccEEEEecCCcceeeEEEeecCCcEEEEecCcEEEEcC--CCcccceeEEEEEEEeeeccCCCCceEeCCeE Confidence 5 567999999999999999999999985 799999999999987 45999999999999999764 69999999999 Q ss_pred EEEEcCCCE---EEEEEEeeeccceeccchhhhhHHhcCCCCEEEEEEec-CCCEEEEEEcCCCeEEEEEEe---cccce Q lcl|Aclame:pro 385 IYGAARGGH---VRELAYNWQANGFVTGDLSLRAAHLFDNLDILDMAYAK-APQPIVWFISSSGKLLGLTYV---PEQQI 457 (681) Q Consensus 385 ~fv~~~g~~---vre~~~~~~~~~~~~~dlt~~~~hl~~~~~~~~~~~~~-~p~~~~~~~~~dg~l~~~ty~---~~q~v 457 (681) +|+|++|++ +|+|+|++.+|+|+++|||+|++||+++ ++..+++++ +|..++|+..+||+|++|+|+ +||+| T Consensus 466 ~f~~~~g~~~~~~r~~~~~~~~d~y~a~Dlt~~~~hl~~~-~v~~~~~~~~~~~~~~~~~~~~~~l~~~~y~~~~~e~~v 544 (801) T protein:vir:15 466 YFASPRASFTSINRYYAVQDVSSVKNAEDMTAHVPNYIPN-GVFSISGTTAENFAAILTSGAPNRVYIYKFLYIDEEIRQ 544 (801) T ss_pred EEEecCCCeeEEEEEEeecccccceehhhHHHHHHHhcCC-ceEEEEEeCCCCcEEEEEEcCCCEEEEEEEecCCCceEE Confidence 999999963 4678999999999999999999999997 566666655 566777999999999999996 46779 Q ss_pred EEEEEeccCCceEEEEEEeeCCCCEEEEEEEECCCCceEEEEeeccCccccccccceEeecceeeccC------------ Q lcl|Aclame:pro 458 GAWHQHDTDGVFESCAVVAEGNEDRLYAVVRRTIGGNEVRYVERMASRQFDAQADAFFVDSGLTYSGE------------ 525 (681) Q Consensus 458 ~aW~~w~~~g~~~~v~~~~~~~~d~l~~~v~r~~~g~~~~~ie~~~~~~~~~~~~~~~lD~~~~y~~~------------ 525 (681) +|||||+++|.++++|+.. .+|.||++|+|+++.+..++.+..+...+....+++||||+..|..+ T Consensus 545 ~aW~~~~~~g~~~~~~~~~--~~d~l~~~v~r~~~~~~~r~~~~~~~~~~~~~~~~~~lD~~~~~~~~~~t~~~~~~~~~ 622 (801) T protein:vir:15 545 QSWSHWDFGDNVTVFAAQV--INSTMTVLMGNEHAVWMGRLHFTKNSIDIPGEPYRLYIDAKRKYTIPAGTYNDDTYQTS 622 (801) T ss_pred EeeEEEEcCCCEEEEEEEe--cCCEEEEEEEecCcEEEEEEEEccccccCCCcceeeeeeeeeeEeeccceeccCceecc Confidence 9999999999999999743 57999999999965444443334555555666678999998766432 Q ss_pred -cceeeccCCccCCcEEEEEeCCeeeccEeecCC-------EEEeCCCCCeEEEeeecceeEEecceEecCCCcccc--- Q lcl|Aclame:pro 526 -PVSHISGLEHLEGKTVSILADGAVHPQRVVTDG-------AIDLDVEAGTVHIGLPITAELQTLPVAMQLDGSFGQ--- 594 (681) Q Consensus 526 -~~~~~~gl~~l~G~~v~v~adG~~~~~~~v~~g-------~i~l~~~~~~v~vG~~y~~~v~~~p~~~~~~~~~~~--- 594 (681) +...+.||+|++|+++.+++||.++...++.+| .+.++.++++|+|||+|+++++++||+++.+++... T Consensus 623 ~~~~~~~gl~~l~g~~v~v~~dG~~~~~~~~~~g~~~~~~~~i~~~~~~~~v~vGl~y~~~~~~~~~~~~~~~~~~~~~~ 702 (801) T protein:vir:15 623 ISLATIYGMNFTKGRVSVVFPDGKIIEVDQPINGWSSDPVLRLDGNQEGQVVYIGFNIPFTYTFSKFLIKKTAEDGSTAT 702 (801) T ss_pred cccccccccccccceEEEEEeCCceeeeeeecCcccCcceEEEcCCCCCcEEEEeeeeeEEEEecceEEeccCCCCCcee Confidence 223578999999999999999999998888887 456678899999999999999999999986655432 Q ss_pred --cceeEEEEEEEEEeccccEEEecCCCeeEEeeeecccc------cCCcCCcccceEEEEecCCcCcceEEEEEECCcc Q lcl|Aclame:pro 595 --GRVKNINKLWLRVHRSSGIFAGPHADALTEVKQRTSEP------YGSPPALKSEEIPLVLSPKWGDSGQLFVRQADPL 666 (681) Q Consensus 595 --~~~~~i~rv~l~~~~S~~~~v~~~~~~~~~~~~~~~~~------~~~~~~~~tG~~~v~~~~~~~~~~~v~I~~~~P~ 666 (681) .+|+||+|++|++.+|+.+.+.+++...+....+.+.. ..+.|+++||++++|+. +|+++.+|+|+|++|+ T Consensus 703 ~~~~rl~l~r~~~~~~~tg~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tg~~~vp~~-g~~~~~~v~i~~d~P~ 781 (801) T protein:vir:15 703 EDIGRLQLRRAWVNYEDSGAFTIRVNNLSREFIYTMAGARLGSDNLRVGRSNIGTGQYRFPVV-GNAQTNLVTIESDAST 781 (801) T ss_pred eeeccEEEEEEEEEeccCcceEEEECCcccccceeecCcccccccccccccccccceEEEEEe-ecCceEEEEEEECCCC Confidence 35689999999999999998877654332211222222 23457889999999984 7899999999999999 Q ss_pred CEEEEEEEEEEEEcC Q lcl|Aclame:pro 667 PLMIVSMSAEIAIGA 681 (681) Q Consensus 667 P~tvlai~~ev~vg~ 681 (681) ||+|+||+||....= T Consensus 782 P~tvlsi~~e~~y~~ 796 (801) T protein:vir:15 782 PLNIIGCGWEGNYLR 796 (801) T ss_pred cEEEEEEEEEEEEec Confidence 999999999999887 No 15 >protein:vir:8887 Length: 808 # NCBI annotation: tail tubular protein B # Family: family:all:825 # MgeID: mge:161 # MgeName: gh-1 # Cross-refs: genbank:acc:NP_813776;genbank:gi:29366731;genbank:GeneID:1258831 Probab=100.00 E-value=1.8e-157 Score=879.87 Aligned_cols=661 Identities=13% Similarity=0.118 Sum_probs=523.1 Q ss_pred CCcceEeecccccccccchhcccchHHHHHHHHhhhhccEEeeccCeeeCCchheeeecCCC---cCceEEEEEEeCCCC Q lcl|Aclame:pro 1 MSNVRVLQRSFGGGEISPEMFGRIDDVKYQSGLAICRNFVVKPQGPAENRAGFAFVREVKDS---AKKVRLIPFTYSVTQ 77 (681) Q Consensus 1 M~~~~~~q~~f~~GElsP~l~~R~D~~~y~~~~~~~~N~~~~~~Gg~~rRpG~~~v~~~~~~---~~~~rlipf~~~~~~ 77 (681) ||++....+||.+| +++|.|++||++||++|+||++.|+||++||||++||+++++. ..++||++|.+++++ T Consensus 1 M~~v~~s~~n~~~G-----vSqq~d~~R~~~q~~~~~N~~~~~~gG~~rRpgt~~v~~l~~~~~~~~~~~~~~~~~~~~~ 75 (808) T protein:vir:88 1 MGLVSQSVKNLKGG-----ISQQPDILRFSNQGALQINGWSSETQGLQKRPPTTFTKRLQNKGFLGTKPLVHLINRDAQE 75 (808) T ss_pred Ccceeeecchhccc-----eeccchhHhhhhhhhhhhcceeeeccccccCCchheeeeeeccCCCCCCcEEEEEEeCcCc Confidence 99999999999999 8999999999999999999999999999999999999987654 457899999999999 Q ss_pred eEEEEEcCCEEEEEeCCcEEeeCCEEEEEeCCC--CchhhceeeEEEeccEEEEEcCCcceEE------EEECCCCcEEE Q lcl|Aclame:pro 78 TMVIELGAGYFRFHTNGGTLLDGAVPYEIANPY--AEADLFNIHYVQSADVLTLVHPNYAPRE------LRRLGATNWQL 149 (681) Q Consensus 78 ~y~lefg~~~irv~~~~~~v~~~~~~~~i~TPy--~~a~l~~l~~~qsaD~l~lvh~~~~p~~------l~R~~~~~W~~ 149 (681) +|+|+|++++||||+..|. ...++...|| ++..+.+|+++|+||++||+|++++|+. ..+.++++|.+ T Consensus 76 ~y~v~~~~~~i~v~~~~G~----~~~v~~~~~y~~~~~~~~~l~~~tvaD~~fi~n~~~~~~~~~~~~~~~~~~~~~~~~ 151 (808) T protein:vir:88 76 QYFVGFSGTGLAVWDLKGN----NYTVRGYNGYANCANPRTDLRLITVADYTFVVNRNTVCQMGSTLTHAAYPRLDGRAI 151 (808) T ss_pred eEEEEEeCCeEEEEEcCCc----eEEEeecCcceEecCChhheeEEEEcCEEEEEcCCcceeecccccccCCCCCCccEE Confidence 9999999999999976442 1234455566 3344678999999999999999999973 44566788866 Q ss_pred EEEe-----------eccCcccc---------cc-------------------cc-----------eeeecCcceeeEEE Q lcl|Aclame:pro 150 ATIA-----------FTSPVATP---------TS-------------------VT-----------ATSNNKGTDYTYRY 179 (681) Q Consensus 150 ~~~~-----------f~~~~~~~---------~~-------------------~t-----------~t~~~~~~~~t~~~ 179 (681) ..+. +...+... .+ .. ......+..+.... T Consensus 152 ~~vr~g~y~~~y~i~i~g~~s~~~~t~t~~~~~~s~~~v~~~~~~~~~~~~~~~~~~~ia~~l~~~~~~~~~~~~~~~~~ 231 (808) T protein:vir:88 152 INVRGGQYGRTLSITINGDGTGSSPQASIKMPNGSAEKVPAGDPYAGMNQVDMTDASWIAAELARQLTVSLGGSGWSFQA 231 (808) T ss_pred EEEcccccCceEEEEEecCCcceeeeEeEEEccCcccceeeccceeecccCCccccccchhhheeeeeecccccceEEEe Confidence 5431 11100000 00 00 00000000010000 Q ss_pred EE--EEEEe--------------------------------------ccceEEecCcccceeccceeccceeeeEEeecc Q lcl|Aclame:pro 180 VV--TALDA--------------------------------------EGKTESAPSSAGTCTNNLFTNGGANTIAWSASS 219 (681) Q Consensus 180 ~v--~a~~~--------------------------------------~g~~~s~~s~~~t~~~~~~~~~~~~~~~w~a~~ 219 (681) .. ..+.. .+....+........+++|.....+...|.++. T Consensus 232 ~~~~~~i~~~a~~~~~~~~t~~g~~~~~~~~~~~~v~~~~~lp~~~p~g~~v~i~~~~~~~~~~~yv~~~~~~~~w~e~~ 311 (808) T protein:vir:88 232 GTGWILINAPANDNVRQIATKDGYADTLLSGFIYQVQTFTKLPANAPPGYLVEITGESARSGDNYWVQYDASGKVWKETA 311 (808) T ss_pred ccceEEEEeccCceeEEEcccCCcCcceeeeeeeeccceeeccccCCCCcEEEEEecCCCCCceeEEEEEcCCeEEEEee Confidence 00 00000 000000011111112233333444556677766 Q ss_pred CCceeeeecccceeEEEeeccceeEEEeccccccccccccccccCccccCCceeEEEEEcCeEEEEecCCCccEEEEEec Q lcl|Aclame:pro 220 GASRYNVYKEQGGLYGYIGQTTGTSLVDDNIAPDLSVTPPIYDAVFNAAGDYPAAVSYFEQRRCFAGTTNKPQNIWMTRS 299 (681) Q Consensus 220 ~~~~~~v~~~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~s~~~g~p~~v~f~~~RL~~~~~~~~p~~v~~S~~ 299 (681) ......-+....+.+.++..+.++.......|.++.++++.++|.|++.++||++|+||||||+|+| ||+|||||+ T Consensus 312 ~~~~~~~~~~~tmp~~lv~~~~~~~~~~~~~w~~r~~Gd~~tnp~psf~g~~~~~v~f~q~RL~f~~----~~~v~~Srt 387 (808) T protein:vir:88 312 KPKIIAGFNNATLPHALVRAADGQFDWTPLTWDGRNAGDDDTNPMPSFVGATINDVFFFRNRLGFLS----GENVVMSRT 387 (808) T ss_pred eccceeeecccceeEEEEecCCceEEEEecccccccccccccCccceecCCceeEEEEEcceEEEee----CCeEEEEec Confidence 6655555666778888888888888888888999999999999999999999999999999999996 799999999 Q ss_pred cChhcccccC--CCcCCccEEEEEcCCCceEEEEEeecC-cEEEEecCcEEEEecCCCcccccceeEEEEeeccCCc-cc Q lcl|Aclame:pro 300 GTESAMSYSL--PVRDDDRVAFRVAAREANAIRHIVPLT-ELLLLTSSGEWRVASVNSDAVTPTTISVRPQSYVGAT-DV 375 (681) Q Consensus 300 gd~~nF~~~~--~~~D~D~i~~~~~~~~~~~i~~~~~~~-~Llv~t~~~e~~~~~~~~~~ltP~~~~~~~~s~~g~~-~~ 375 (681) ||||||++++ ++.|||||+++++++++++|+|+++++ +|+|||+++||+|++ +++|||+|++++++|+|+++ .| T Consensus 388 gd~~nF~~~t~~~~~DdD~i~~~~~~~~~~~i~~~v~~~~~L~i~T~~~e~~l~~--~~~lTP~~~~~~~~s~~~~~~~~ 465 (808) T protein:vir:88 388 SKYFNFFPSSVATLSDDDPIDVAISHNRISILKYAVPFSEQLLLWSDQAQFVLSS--KTILSSKTIELDLTTEFDVSDGA 465 (808) T ss_pred cCcccccCCcccCCCCCccEEEEecCCccceeeEEeecCCcEEEEecCcEEEEeC--CCcccceeEEEEEEEEecccCCC Confidence 9999999975 568999999999999999999999995 799999999999987 46999999999999999975 69 Q ss_pred ccEEeCCeEEEEEcCCCE---EEEEEEeeeccceeccchhhhhHHhcCCCCEEEEEEecCCCEEEEEEcCCCeEEEEEEe Q lcl|Aclame:pro 376 QPVVVNNTTIYGAARGGH---VRELAYNWQANGFVTGDLSLRAAHLFDNLDILDMAYAKAPQPIVWFISSSGKLLGLTYV 452 (681) Q Consensus 376 ~Pv~vg~~v~fv~~~g~~---vre~~~~~~~~~~~~~dlt~~~~hl~~~~~~~~~~~~~~p~~~~~~~~~dg~l~~~ty~ 452 (681) +|+.+|++++|++++|++ +|+|.|++++|+|+++|||+|++||+++..+.+++++++|..++|++++||+|++|+|+ T Consensus 466 ~Pv~vG~~v~f~~~~g~~~~v~r~~~~~~~~d~y~~~dlt~~~~h~~~~~~~~~~~~~~~~~~~v~~~~~~g~l~~~~y~ 545 (808) T protein:vir:88 466 RPYGIGRGVYFAAPRASFTSLKRYYAIQDVSDVKSAEDVSAHVPSYITNTVHAIHGSGTENFVSILSDGSPNKVFIYKFL 545 (808) T ss_pred CceEeCCeEEEEecCCCeeEEEEEEEeeeccCceehhhHHHHHHHhcCCCeEEEEEeCCCCeEEEEEEcCCCEEEEEEEe Confidence 999999999999999975 36789999999999999999999999987777888999999999999999999999997 Q ss_pred ---cccceEEEEEeccCCceEEEEEEeeCCCCEEEEEEEECCCCceEEEEeeccCcc----ccccccceEeecceeeccC Q lcl|Aclame:pro 453 ---PEQQIGAWHQHDTDGVFESCAVVAEGNEDRLYAVVRRTIGGNEVRYVERMASRQ----FDAQADAFFVDSGLTYSGE 525 (681) Q Consensus 453 ---~~q~v~aW~~w~~~g~~~~v~~~~~~~~d~l~~~v~r~~~g~~~~~ie~~~~~~----~~~~~~~~~lD~~~~y~~~ 525 (681) +||+|+|||||+|+|.++++|..++..+|.||++|+|..+ .|+|||+... +....+++||||+++|.+. T Consensus 546 ~~~~e~~v~aW~r~~~~g~~~~~~~~~~~~~d~l~~vV~r~~~----~~ler~~~~~~~~~~~~~~~~~~lD~~~~~~~g 621 (808) T protein:vir:88 546 YLDEILQQQSFSHWEFGDAATTRVLAASCIGSYCYLMIDRPEG----LCLERMEFTQHTIDYSIEPYRTYMDMKKTIVLG 621 (808) T ss_pred ccCCceeEEeeEEEecCCCeeEEEEEEeccCCEEEEEEEcCCc----EEEEEEeeccCCCCCccccceeeeeeeeeeccc Confidence 7888999999999999999999999889999999999764 6889886432 2234557899999998763 Q ss_pred c---c---ee------eccCCccCCcEEEEEeCCeeeccE-eec--CCEEEe--CCCCCeEEEeeecceeEEecceEecC Q lcl|Aclame:pro 526 P---V---SH------ISGLEHLEGKTVSILADGAVHPQR-VVT--DGAIDL--DVEAGTVHIGLPITAELQTLPVAMQL 588 (681) Q Consensus 526 ~---~---~~------~~gl~~l~G~~v~v~adG~~~~~~-~v~--~g~i~l--~~~~~~v~vG~~y~~~v~~~p~~~~~ 588 (681) . . +. ..++.|++++.+.+.+||..+... ... +..+++ ++++++|+|||+|+++++|+||+++. T Consensus 622 ~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~~~~~~~~~~~~~v~vGl~y~s~~~~~p~~~~~ 701 (808) T protein:vir:88 622 AYNIDTNLTSFDVRTAYGGTPGPESTFYTIDQQGVLIEHEARDWATNPYISFVGNRAGEQMVIGKQYTFQYEFSKFLIKQ 701 (808) T ss_pred cccCccccceeecccccccccccceeEEEEcCCceEEeeecccccCcceEEeCCCccCceEEEeeeeeEEEEecceEEec Confidence 1 1 11 346678899999999999875432 222 223444 46789999999999999999999999 Q ss_pred CCcccccc-----eeEEEEEEEEEeccccEEEecCCCeeEEeeee-----cccccCCcCCcccceEEEEecCCcCcceEE Q lcl|Aclame:pro 589 DGSFGQGR-----VKNINKLWLRVHRSSGIFAGPHADALTEVKQR-----TSEPYGSPPALKSEEIPLVLSPKWGDSGQL 658 (681) Q Consensus 589 ~~~~~~~~-----~~~i~rv~l~~~~S~~~~v~~~~~~~~~~~~~-----~~~~~~~~~~~~tG~~~v~~~~~~~~~~~v 658 (681) +++..+++ ++||+|+++++.+|+++.++.+....+....+ ..+++..+++++||++++|+. +|+++.+| T Consensus 702 ~~g~~~~~~~~~gr~~l~r~~~~~~~tg~~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~tg~~~vp~~-~~~~~~~v 780 (808) T protein:vir:88 702 TADDGSTSTEDIGRLQLRRAWLNYEESGAFEINVNNGSSEFVYVMTGGRLGIQRVLGELSVGTGQFKFPVT-GNAVNQRV 780 (808) T ss_pred CCCCcceeecccceEEEEEEEEEeecccceEEEeCCCcccceeeccCcccCcccccCccccccceEEEEec-ccCceeEE Confidence 88877764 68999999999999999988776554422222 234566678999999999986 58999999 Q ss_pred EEEECCccCEEEEEEEEEEEEcC Q lcl|Aclame:pro 659 FVRQADPLPLMIVSMSAEIAIGA 681 (681) Q Consensus 659 ~I~~~~P~P~tvlai~~ev~vg~ 681 (681) +|+|+.|+||+||||+||....= T Consensus 781 ~i~~d~P~P~tilsi~~eg~y~~ 803 (808) T protein:vir:88 781 TITSSNPNPLNVIGCGWEGNYIR 803 (808) T ss_pred EEEECCCCceEEEEEEEEEEEec Confidence 99999999999999999999988 No 16 >protein:vir:6326 Length: 826 # NCBI annotation: tail tubular protein B # Family: family:all:825 # MgeID: mge:132 # MgeName: phiKMV # Cross-refs: genbank:acc:NP_877473;genbank:gi:33300845;uniprot:Q7Y2D1;genbank:GeneID:1482615 Probab=100.00 E-value=4.5e-157 Score=877.71 Aligned_cols=659 Identities=13% Similarity=0.131 Sum_probs=508.2 Q ss_pred CCcceEeecccccccccchhcccchHHHHHHHHhhhhccEEeeccCeeeCCchheeeecCCCcCceEEEEEEe-----CC Q lcl|Aclame:pro 1 MSNVRVLQRSFGGGEISPEMFGRIDDVKYQSGLAICRNFVVKPQGPAENRAGFAFVREVKDSAKKVRLIPFTY-----SV 75 (681) Q Consensus 1 M~~~~~~q~~f~~GElsP~l~~R~D~~~y~~~~~~~~N~~~~~~Gg~~rRpG~~~v~~~~~~~~~~rlipf~~-----~~ 75 (681) ||++....+||.+| +++|.|++||++||++|+||++.|+||++||||++||+.++++. +.+++||.| +. T Consensus 1 M~~i~~s~~n~~~G-----vSqq~d~~r~~~q~~~~~N~~~~~~~G~~rRpg~~~v~~~~~~~-~~~~~~~~~~~~r~~~ 74 (826) T protein:vir:63 1 MSYKQSAYPNLLMG-----VSQQVPFERLPGQLSEQINMVSDPVSGLRRRSGIELMAHLLHTD-QPWPRPFLYHTNLGGR 74 (826) T ss_pred Cceeeeecchhhcc-----eeccCchHhhhhhhhhhhcceeeccCCcccCchhHhhhhhccCC-ccccccEEEEEecCCC Confidence 99999999999999 89999999999999999999999999999999999999999865 468999998 78 Q ss_pred CCeEEEEEcCCEEEEEe-CCcEEeeCCEEEEEeCCCCchhhceeeEEEeccEEEEEcCCcceEE----EEECCCCcEEEE Q lcl|Aclame:pro 76 TQTMVIELGAGYFRFHT-NGGTLLDGAVPYEIANPYAEADLFNIHYVQSADVLTLVHPNYAPRE----LRRLGATNWQLA 150 (681) Q Consensus 76 ~~~y~lefg~~~irv~~-~~~~v~~~~~~~~i~TPy~~a~l~~l~~~qsaD~l~lvh~~~~p~~----l~R~~~~~W~~~ 150 (681) +|+|+|||++++||||. ++|.++..+ .+.+++++++.+++|+++|+||++||+|++++|+. +.+.++..|.+. T Consensus 75 ~~~~~~~~~~g~irv~~~~~g~~~~~~--~~~~~y~~~~~~~~l~~~t~aD~~fi~n~~~~p~~~~~~~~~~~~~~~~~~ 152 (826) T protein:vir:63 75 SIAMLVAQHRGELYLFDERDGRLLMGQ--PLVHDYLKANDYRQLRAATVADDLFIANLSVKPEADRTDIKGVDPNKAGWL 152 (826) T ss_pred ceEEEEEecCCcEEEEEcCCCeEEEcC--CCCCceeeecCccceEEEEeCCEEEEEeCCeeeeeccccccccCCCCcEEE Confidence 99999999999999995 455444322 11234445666788999999999999999999985 778888888775 Q ss_pred EEe-----------eccCc---ccccccceeeecC---cce---------eeEEEEEEEEE----e-------------- Q lcl|Aclame:pro 151 TIA-----------FTSPV---ATPTSVTATSNNK---GTD---------YTYRYVVTALD----A-------------- 186 (681) Q Consensus 151 ~~~-----------f~~~~---~~~~~~t~t~~~~---~~~---------~t~~~~v~a~~----~-------------- 186 (681) .+. ++... ....+.+.+.... +.. ....+...... . T Consensus 153 ~v~~g~Y~~~y~vti~~~~~~~gt~~s~t~t~~t~~~~~a~~~~~~~~~~~s~~yia~~l~~~~~a~~~~~~~~~t~~~~ 232 (826) T protein:vir:63 153 YIKAGQYSKAFSMTIKVKDNATGTTYSHTATYVTPDNASTNPNLAEAPFQTSVGYIAWQLYGKFFGAPEYTLPNSTKKYP 232 (826) T ss_pred EeeccccCceEEEEEEeccccCCccccceEEEEeccCCcccccccccceeeeeeeeeeeceeeeeeccccccCCCccccc Confidence 432 11000 0000000110000 000 00000000000 0 Q ss_pred --------------------ccceEEe-cCcc------------------------------------------------ Q lcl|Aclame:pro 187 --------------------EGKTESA-PSSA------------------------------------------------ 197 (681) Q Consensus 187 --------------------~g~~~s~-~s~~------------------------------------------------ 197 (681) .+..... .... T Consensus 233 ~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~ 312 (826) T protein:vir:63 233 KVDPDANAATIAGYLNQRGVQDGYIAFRGDADIHVEVSTDMGNNYGIASGGMSLNATADLPALLPGVGAPGVGVQFMDGA 312 (826) T ss_pred eecCCcccceeecceeEecccccEEEEeeCCcccEEEccCCCCcceEEEEEeeccceeeccccCCCcccceEEEeeEEeE Confidence 0000000 0000 Q ss_pred ----cceeccceeccceeeeEEeeccCCceeeeecccceeEEEe-eccceeEEEeccccccccccccccccCccccCCce Q lcl|Aclame:pro 198 ----GTCTNNLFTNGGANTIAWSASSGASRYNVYKEQGGLYGYI-GQTTGTSLVDDNIAPDLSVTPPIYDAVFNAAGDYP 272 (681) Q Consensus 198 ----~t~~~~~~~~~~~~~~~w~a~~~~~~~~v~~~~~~~~~~~-~~~~~t~~~~~~~~~~~~~~~~~~~~~~s~~~g~p 272 (681) +...+.+|.....+...|.++.+... .+...++.+.++ ..+++++......|.++.++++.++|.+++.++|| T Consensus 313 ~~~~g~~~d~~y~~~~~~~~~w~e~~~~~~--~~~~~tmp~~l~~~~~~~~f~~~~~~w~~r~~Gd~~tnp~psf~g~~~ 390 (826) T protein:vir:63 313 VMATGSTKAPVYFEWDSANRRWAERAAYGT--DWVLKKMPLALRWDEATDTYSLNELEYDRRGSGDEDTNPTFNFVTRGI 390 (826) T ss_pred EecCCCcccceEEEEEcCCceEEEEeecCc--ccccccceEEEEEeccCCeEEEeccccccccccccccCCCccccCCCc Confidence 00000111111112222322222111 111223334443 23444555556668889999999999999999999 Q ss_pred eEEEEEcCeEEEEecCCCccEEEEEeccChhcccccC--CCcCCccEEEEEcCCCceEEEEEeecC-cEEEEecCcEEEE Q lcl|Aclame:pro 273 AAVSYFEQRRCFAGTTNKPQNIWMTRSGTESAMSYSL--PVRDDDRVAFRVAAREANAIRHIVPLT-ELLLLTSSGEWRV 349 (681) Q Consensus 273 ~~v~f~~~RL~~~~~~~~p~~v~~S~~gd~~nF~~~~--~~~D~D~i~~~~~~~~~~~i~~~~~~~-~Llv~t~~~e~~~ 349 (681) ++|+||||||+|++ ||+|||||+||||||++++ ++.|||||+++++++++++|+|+++++ +|+|||+++||+| T Consensus 391 ~~v~f~q~RL~f~~----~~~v~~Srtgd~~nF~~~s~~~~~DdD~I~~~~ss~~~~~i~~~v~~~~~L~l~T~~~q~~l 466 (826) T protein:vir:63 391 TGMTTFQGRLVLLS----QEYVCMSASNNPHRWFKKSAAALNDDDPIEIAAQGSLTEPYEHAVTFNKDLIVFAKKYQAVV 466 (826) T ss_pred eEEEEEeceEEEee----CCeEEEEccCCccccccccccCCCCCccEEEEEcCCcceeeEEEeecCCcEEEEecCcEEEE Confidence 99999999999995 7899999999999999975 678999999999999999999999996 7999999999999 Q ss_pred ecCCCcccccceeEEEEeeccCC-cccccEEeCCeEEEEEcCCC---EEEEEEEeeecc-ceeccchhhhhHHhcCCCCE Q lcl|Aclame:pro 350 ASVNSDAVTPTTISVRPQSYVGA-TDVQPVVVNNTTIYGAARGG---HVRELAYNWQAN-GFVTGDLSLRAAHLFDNLDI 424 (681) Q Consensus 350 ~~~~~~~ltP~~~~~~~~s~~g~-~~~~Pv~vg~~v~fv~~~g~---~vre~~~~~~~~-~~~~~dlt~~~~hl~~~~~~ 424 (681) ++ +++|||+|++++++|+|++ +.|+|+.+|++++|+|++|+ +||||.|+.+.+ .|+++|||.|++||+++ ++ T Consensus 467 s~--~~~lTP~~~~i~~~s~~~~~~~~~Pv~vG~~v~Fv~~~g~~~s~v~e~~~~~d~~~~y~~~dlt~~~~~l~~~-~v 543 (826) T protein:vir:63 467 PG--GGIVTPRTAVISITTQYDLDTRAAPAVTGRSVYFAAERALGFMGLHEMAPSPSTDSHYVAEDVTSHIPSYMPG-PA 543 (826) T ss_pred eC--CCcccceeEEEEEEEeecccCCCCceEeCCeEEEEecCCCceeEEEEEEeeeccccceehhHHHHHHHHhcCC-Ce Confidence 87 4699999999999999976 57999999999999998873 899999997655 59999999999999997 79 Q ss_pred EEEEEecCCCEEEEEEcCCCeEEEEEEe---cccceEEEEEeccCCceEEEEEEeeCCCCEEEEEEEECCCCceEEE-Ee Q lcl|Aclame:pro 425 LDMAYAKAPQPIVWFISSSGKLLGLTYV---PEQQIGAWHQHDTDGVFESCAVVAEGNEDRLYAVVRRTIGGNEVRY-VE 500 (681) Q Consensus 425 ~~~~~~~~p~~~~~~~~~dg~l~~~ty~---~~q~v~aW~~w~~~g~~~~v~~~~~~~~d~l~~~v~r~~~g~~~~~-ie 500 (681) .+|++|++|++++|++++||+|++|+|+ +||+|+|||||+|+|+|++||++ +|+||++|+|+++++..|+ +| T Consensus 544 ~~~a~s~~~~~v~~~~~~dg~l~~~~y~~~~~e~~v~aW~~~~~~g~v~~~~~i----~d~l~~iv~r~~~~~~~r~~~e 619 (826) T protein:vir:63 544 EYIQAAASSGYLVFGTSTADEMICHQYLWQGNEKVQNAFHRWTLRHQIIGAYFT----GDNLMVLIQKGQEIALGRMHLN 619 (826) T ss_pred EEEEEcCCCCEEEEEEcCCCEEEEEEEeeCCCcEEEEeEEEEecCCcEEEEEEE----CCeEEEEEEeCCCEEEEEEEEE Confidence 9999999999999999999999999997 89999999999999999999998 7899999999999987776 99 Q ss_pred eccCcc---ccccccceEeecceeeccCccee-e-ccCCccCCcEEEEEeCCeeecc----EeecCCEEEeCC----CCC Q lcl|Aclame:pro 501 RMASRQ---FDAQADAFFVDSGLTYSGEPVSH-I-SGLEHLEGKTVSILADGAVHPQ----RVVTDGAIDLDV----EAG 567 (681) Q Consensus 501 ~~~~~~---~~~~~~~~~lD~~~~y~~~~~~~-~-~gl~~l~G~~v~v~adG~~~~~----~~v~~g~i~l~~----~~~ 567 (681) +|+... +...++++++||+..+.+..... + .+++|+++..+.+++||.+++. .++.+++++|+. .+. T Consensus 620 ~~~~~~~~~~~~~d~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~l~~~~~~~~~ 699 (826) T protein:vir:63 620 SLPAREGLQYPKYDYWRRIEATVAGELELTKQHWDLIKDASAVYQLQPVAGAYMERTHLGVKRETNTKVFLDVPEAVVGA 699 (826) T ss_pred ecCCccccccCCccceEEEEEeeeeeeccCcceeecccCcccccEEEEeeCccccCCccceEEecCCEEEEecCCCcccc Confidence 987543 45566788999999887764333 2 3789999999999999998654 456788888854 467 Q ss_pred eEEEeeecceeEEecceEecCCCccccc-ceeEEEEEEEEEeccccEEEecCCCeeEE-eeee-------cccccCCcCC Q lcl|Aclame:pro 568 TVHIGLPITAELQTLPVAMQLDGSFGQG-RVKNINKLWLRVHRSSGIFAGPHADALTE-VKQR-------TSEPYGSPPA 638 (681) Q Consensus 568 ~v~vG~~y~~~v~~~p~~~~~~~~~~~~-~~~~i~rv~l~~~~S~~~~v~~~~~~~~~-~~~~-------~~~~~~~~~~ 638 (681) +|+|||+|+++++++||+++.+++..++ .|+||+|+++++.+|+++.++++...... +.++ ..+...++|+ T Consensus 700 ~v~VGl~y~s~~~~~~~~~~~~~g~~~~~gr~~l~r~~~~~~~tg~~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~g~p~ 779 (826) T protein:vir:63 700 VYVVGCEFWSKVEFTPPVLRDHNGLPMTSTRAVLHRYNVNFGWTGEFLWRISDTARPNQPWYDTTPLRLFSRQLNAGEPL 779 (826) T ss_pred EEEEeeeeeEEEEecceEEEccCCCcceeccEEEEEEEEEeeccccEEEEecCccccceeEeecCCceeccccccccccc Confidence 8999999999999999999988887765 58999999999999999998876543322 1111 1223345566 Q ss_pred cccceEEEEecCCcCcceEEEEEECCccCEEEEEEEEEEEEcC Q lcl|Aclame:pro 639 LKSEEIPLVLSPKWGDSGQLFVRQADPLPLMIVSMSAEIAIGA 681 (681) Q Consensus 639 ~~tG~~~v~~~~~~~~~~~v~I~~~~P~P~tvlai~~ev~vg~ 681 (681) +.+|.+++|+. +++++.+|+|+|+.|+||+|++|+||..+.= T Consensus 780 ~~t~~~~vP~~-~~~~~~~i~i~~d~P~p~~il~i~~~~~yn~ 821 (826) T protein:vir:63 780 VDSAVVPLPAR-VDMATSKFELSCHSPYDMNVRAVEYNFKSNQ 821 (826) T ss_pred ccceEEEEEEe-eccceEEEEEEeCCCCcEEEEEEEEEEEEec Confidence 77999999986 4689999999999999999999999998877 No 17 >protein:vir:3366 Length: 801 # NCBI annotation: tail tubular protein B # Family: family:all:825 # MgeID: mge:67 # MgeName: T3 # Cross-refs: genbank:acc:NP_523337;swissprot:trembl:q8w5u3;genbank:gi:17570828;goa:Q8W5U3;uniprot:Q8W5U3;genbank:GeneID:927453 Probab=100.00 E-value=5e-157 Score=877.48 Aligned_cols=657 Identities=11% Similarity=0.158 Sum_probs=503.9 Q ss_pred CCcceEeecccccccccchhcccchHHHHHHHHhhhhccEEeeccCeeeCCchheeeecCCCcCceEEEEE----EeCCC Q lcl|Aclame:pro 1 MSNVRVLQRSFGGGEISPEMFGRIDDVKYQSGLAICRNFVVKPQGPAENRAGFAFVREVKDSAKKVRLIPF----TYSVT 76 (681) Q Consensus 1 M~~~~~~q~~f~~GElsP~l~~R~D~~~y~~~~~~~~N~~~~~~Gg~~rRpG~~~v~~~~~~~~~~rlipf----~~~~~ 76 (681) ||++....+||.+| +++|.|++||++||++|+||+++|+||++||||++||+.++.+. +.+++|| .|+++ T Consensus 1 M~~i~~~~~nl~~G-----vSqq~d~~r~~~q~~~~~N~~~~~~gG~~rRpGt~~va~~~~~~-~~~~~~~~~~~~r~~~ 74 (801) T protein:vir:33 1 MALISQSIKNLKGG-----ISQQPDILRFTEQGSVQINGWSSESEGIQKRPPMIHLKTLGTAG-YVGAQPYVHLINRDEF 74 (801) T ss_pred CceeEeeccceecc-----eeccchhHhhhhhHhhhhcceeecccCcccCchhHhhhhhcCCC-ccccceEEEEEEeCCc Confidence 99999999999999 89999999999999999999999999999999999999998753 3355555 67999 Q ss_pred CeEEEEEcCCEEEEEeCCcEEeeCCEEEEEeCCCC--chhhceeeEEEeccEEEEEcCCcceEEEEE------CCCCcEE Q lcl|Aclame:pro 77 QTMVIELGAGYFRFHTNGGTLLDGAVPYEIANPYA--EADLFNIHYVQSADVLTLVHPNYAPRELRR------LGATNWQ 148 (681) Q Consensus 77 ~~y~lefg~~~irv~~~~~~v~~~~~~~~i~TPy~--~a~l~~l~~~qsaD~l~lvh~~~~p~~l~R------~~~~~W~ 148 (681) |+|+|||++++||||+.+|..+ .++..+||. .....+|+++|+||++||+|++++|+...+ .....|- T Consensus 75 ~~y~l~~~~~~irv~~~~G~~~----~v~~~~~y~~~~~~~~~l~~~t~aD~~fi~nr~~~p~~~~~~~~~~~~~~~~~~ 150 (801) T protein:vir:33 75 EQYFVVFTGEDIKVFDLDGKEY----QVRGDRSYVRTANPREDLRMVTVADYTFVTNRKVVVQSNDQSVNLPGFKDQGDA 150 (801) T ss_pred eEEEEEEcCCeEEEEccCCcEE----EEecCCcceeecCcchheEEEEEcCEEEEeeCCeeecccCCcccccccCCCcce Confidence 9999999999999997655322 234445552 233567999999999999999999986432 1223343 Q ss_pred EEEEe---------e--cc--------Cccccc-c-----cceee---------ec-------CcceeeEEE-------- Q lcl|Aclame:pro 149 LATIA---------F--TS--------PVATPT-S-----VTATS---------NN-------KGTDYTYRY-------- 179 (681) Q Consensus 149 ~~~~~---------f--~~--------~~~~~~-~-----~t~t~---------~~-------~~~~~t~~~-------- 179 (681) +..+. + .. ...... . ....+ .. ....+.... T Consensus 151 li~v~~~~yg~t~~I~i~gs~~~~~~~~~gs~~~~v~~~s~~~~A~~l~~~~~~~~~~~~~~~~~~~w~~~~~~g~~~i~ 230 (801) T protein:vir:33 151 LINVRGGQYGRRLSIEFNGAERAAVQLPDGSQPAHVNEVDGQAIAEKLAAQLRNNLGNPNNDQDPNKWRFNVGPGFIHIL 230 (801) T ss_pred EEEEeecccceEEEEEECCcceEEEEeeccccccccccccchhhhhhhhhhhhccCccceeeecCceEEEEecCeEEEEe Confidence 33211 1 00 000000 0 00000 00 000000000 Q ss_pred -------------------EEEEEE-------------eccceEEecCcccceeccceeccceeeeEEeeccCCceeeee Q lcl|Aclame:pro 180 -------------------VVTALD-------------AEGKTESAPSSAGTCTNNLFTNGGANTIAWSASSGASRYNVY 227 (681) Q Consensus 180 -------------------~v~a~~-------------~~g~~~s~~s~~~t~~~~~~~~~~~~~~~w~a~~~~~~~~v~ 227 (681) ...++. ..|..............++|......+..|.++.+....... T Consensus 231 ~p~~~~~~~itt~~g~~~~~~~~~~~~v~~~~~lp~~~~~g~~v~v~~~~~~~~~~y~v~~~~~~~~w~e~~~~g~~~~~ 310 (801) T protein:vir:33 231 APNNDNVWGLQTKDGYADQLINPVTHYTQSFQKLPINAPDGYIVKIVGDTSKTADQYYVRFDLNRKVWVETIGWNTRTHL 310 (801) T ss_pred cCCCcccccccccCCccceeEEEEeecccceeeeeeecCCCcEEEEEecCCCcccceEEEEEcCCcEEEEeeccccceee Confidence 000000 011111111112222234555555667789888887777777 Q ss_pred cccceeEEEeeccceeEEEeccccccccccccccccCccccCCceeEEEEEcCeEEEEecCCCccEEEEEeccChhcccc Q lcl|Aclame:pro 228 KEQGGLYGYIGQTTGTSLVDDNIAPDLSVTPPIYDAVFNAAGDYPAAVSYFEQRRCFAGTTNKPQNIWMTRSGTESAMSY 307 (681) Q Consensus 228 ~~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~s~~~g~p~~v~f~~~RL~~~~~~~~p~~v~~S~~gd~~nF~~ 307 (681) ...++.+.++..+.++.......|.++.++++.++|.|++.++||++|+||||||+|++ ||+|||||+||||||++ T Consensus 311 ~~~tmp~~l~~~~~~tf~~~~~~w~~r~~gd~~tnp~psf~g~~~~~v~f~q~RL~f~~----~~~v~~Srtgd~~nF~~ 386 (801) T protein:vir:33 311 HYHTMPWALVRASDGNFDFKYLEWGARTVGDDTTNPYPSFTGQTINDIFFFRNRLGFLS----GENIILSRTSKYFNFFP 386 (801) T ss_pred eecccceEEEEccCceEEecccCccccccCCccccCcccccCCCceEEEEEcceEEEee----CCeEEEEecCCcccccc Confidence 77888899888888888878888999999999999999999999999999999999995 79999999999999999 Q ss_pred cC--CCcCCccEEEEEcCCCceEEEEEeecC-cEEEEecCcEEEEecCCCcccccceeEEEEeeccCCc-ccccEEeCCe Q lcl|Aclame:pro 308 SL--PVRDDDRVAFRVAAREANAIRHIVPLT-ELLLLTSSGEWRVASVNSDAVTPTTISVRPQSYVGAT-DVQPVVVNNT 383 (681) Q Consensus 308 ~~--~~~D~D~i~~~~~~~~~~~i~~~~~~~-~Llv~t~~~e~~~~~~~~~~ltP~~~~~~~~s~~g~~-~~~Pv~vg~~ 383 (681) ++ +++|||||+++++++++++|+|+++++ +|+|||+++||+|++ +++|||+|++++++|+|+++ .++|+.+|++ T Consensus 387 ~t~~~~~DdD~i~~~~~~~~~~~i~~~v~~~~~L~l~t~~~q~~l~~--~~~lTP~~~~~~~~s~~~~~~~~~Pv~vg~~ 464 (801) T protein:vir:33 387 ASVSNYSDDDPIDVAVSHDRVSTLKYAVPFSEELLLWSDQAQFVLTA--SDILSSRSVGLNLTTQFDVQDRARPHGVGRN 464 (801) T ss_pred ccccCCCCCccEEEEecCCcceeeeEEeecCCcEEEEecCcEEEEeC--CCcccceeEEEEEEEeecccCCCCceEecCe Confidence 75 468999999999999999999999995 799999999999987 46999999999999999975 6999999999 Q ss_pred EEEEEcCCCE---EEEEEEeeeccceeccchhhhhHHhcCCCCEEEEEEecCCCEEE-EEEcCCCeEEEEEEe---cccc Q lcl|Aclame:pro 384 TIYGAARGGH---VRELAYNWQANGFVTGDLSLRAAHLFDNLDILDMAYAKAPQPIV-WFISSSGKLLGLTYV---PEQQ 456 (681) Q Consensus 384 v~fv~~~g~~---vre~~~~~~~~~~~~~dlt~~~~hl~~~~~~~~~~~~~~p~~~~-~~~~~dg~l~~~ty~---~~q~ 456 (681) ++|+|++|++ +|+|+|++.+|+|+++|||+|++||+++ ++.+++++++|+.++ |+..++++|++|+|+ +||+ T Consensus 465 v~f~~~~g~~~~v~r~~~~~~~~d~y~~~Dlt~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~y~~~~~e~~ 543 (801) T protein:vir:33 465 VYFSSPRASFTSINRYYAVQDVSSVKNAEDMTAHVPNYIPN-GVFSISGTTAENFVAILTSGAPNRVYIYKFLYIDEEIR 543 (801) T ss_pred EEEEecCCCeeEEEEEEeecccccceehhhHHHHHHHhcCC-ceEEEEEcCCCCeEEEEEecCCCEEEEEEEecCCCceE Confidence 9999999964 4678899999999999999999999997 788888888777665 566678999999997 5777 Q ss_pred eEEEEEeccCCceEEEEEEeeCCCCEEEEEEEECCCCceEEEEeeccC----ccccccccceEeeccee-------eccC Q lcl|Aclame:pro 457 IGAWHQHDTDGVFESCAVVAEGNEDRLYAVVRRTIGGNEVRYVERMAS----RQFDAQADAFFVDSGLT-------YSGE 525 (681) Q Consensus 457 v~aW~~w~~~g~~~~v~~~~~~~~d~l~~~v~r~~~g~~~~~ie~~~~----~~~~~~~~~~~lD~~~~-------y~~~ 525 (681) |+|||||+|+|.++++|+ ++.+|+||++|+|+.+ .|+|+|+. .........+||||+.. |.+. T Consensus 544 v~aW~~~~~~g~~~~~~~--~~~~d~l~~vv~r~~~----~~le~~~~~~~~~d~~~~~~~~~lD~~~~~~~~~~~~~~~ 617 (801) T protein:vir:33 544 QQSWSHWDFGDNVTVFAA--QVINSTMTVLMSNEHA----VWMGRLHFTKDSIDLPGEPYRLYIDAKRKYTIPAGTYNDD 617 (801) T ss_pred EEeeEEEEcCCCEEEEEE--ecCCCEEEEEEEcCCc----EEEEEEEEeeccccCCCccceEEeecceEEEecccceecC Confidence 889999999999999885 5678999999999853 56676642 22333455788998654 4443 Q ss_pred cc-e-----eeccCCccCCcEEEEEeCCeeeccE---eecCC----EEEeCCCCCeEEEeeecceeEEecceEecCCCcc Q lcl|Aclame:pro 526 PV-S-----HISGLEHLEGKTVSILADGAVHPQR---VVTDG----AIDLDVEAGTVHIGLPITAELQTLPVAMQLDGSF 592 (681) Q Consensus 526 ~~-~-----~~~gl~~l~G~~v~v~adG~~~~~~---~v~~g----~i~l~~~~~~v~vG~~y~~~v~~~p~~~~~~~~~ 592 (681) +. + .+.|++|+||+++.+++||.++... .+..+ .+.+++++++|+|||+|+++++++||+++.+.++ T Consensus 618 ~~~t~~~~~~~~gl~~~eg~~v~~~~dG~v~~~~~~~~~~~~~~~l~i~~~~~~~~v~vGl~y~s~~~~~~~~~~~~~~~ 697 (801) T protein:vir:33 618 TYQTSISLSTIYGMNFTKGRVSVVFPDGKIVEIDQPINGWSSDPMLRLDGNQEGQVVYIGFNIPFTYTFSKFLIKKTAED 697 (801) T ss_pred ccccccccccccCCccccceEEEEEeCCceEeeeeccccccCceeEEecCCCCCCEEEEeeeeeEEEEeCceEEeccCCC Confidence 32 2 2458999999999999999875432 23223 3445678999999999999999999999866543 Q ss_pred c-----ccceeEEEEEEEEEeccccEEEecCCCeeEEeeeecccc------cCCcCCcccceEEEEecCCcCcceEEEEE Q lcl|Aclame:pro 593 G-----QGRVKNINKLWLRVHRSSGIFAGPHADALTEVKQRTSEP------YGSPPALKSEEIPLVLSPKWGDSGQLFVR 661 (681) Q Consensus 593 ~-----~~~~~~i~rv~l~~~~S~~~~v~~~~~~~~~~~~~~~~~------~~~~~~~~tG~~~v~~~~~~~~~~~v~I~ 661 (681) . ..+|+||+|+++++.+|+++.+.++....+......+.. ....++++||++++|+. +|+++.+|+|+ T Consensus 698 ~~~~~~~~~r~~l~r~~~~~~~tg~~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tg~~~vp~~-g~~~~~~v~i~ 776 (801) T protein:vir:33 698 GSTATEDIGRLQLRRAWVNYEDSGAFIIRVNNLSREFIYTMAGARLGSDNLRVGGSNIGTGQYRFPVV-GNAQTNTVTIE 776 (801) T ss_pred CceeeeeeccEEEEEEEEEeecCcceEEEECCcccceeeeecccccccccccccccccccceEEEEee-ccCceEEEEEE Confidence 2 235689999999999999999887654332211222222 23446789999999985 68999999999 Q ss_pred ECCccCEEEEEEEEEEEEcC Q lcl|Aclame:pro 662 QADPLPLMIVSMSAEIAIGA 681 (681) Q Consensus 662 ~~~P~P~tvlai~~ev~vg~ 681 (681) |++|+||+||||+||....= T Consensus 777 ~d~P~P~tvl~i~~eg~y~~ 796 (801) T protein:vir:33 777 SDASTPLNIIGCGWEGNYLR 796 (801) T ss_pred eCCCCCEEEEEEEEEEEEec Confidence 99999999999999999887 No 18 >protein:vir:78957 Length: 826 # NCBI annotation: putative tail tubular protein B # Family: family:all:825 # MgeID: mge:1860 # MgeName: LKD16 # Cross-refs: genbank:acc:YP_001522826;genbank:gi:158345061;genbank:GeneID:5687447 Probab=100.00 E-value=8.9e-156 Score=870.62 Aligned_cols=658 Identities=14% Similarity=0.160 Sum_probs=498.8 Q ss_pred CCcceEeecccccccccchhcccchHHHHHHHHhhhhccEEeeccCeeeCCchheeeecCCCcCceEEEEEEe-----CC Q lcl|Aclame:pro 1 MSNVRVLQRSFGGGEISPEMFGRIDDVKYQSGLAICRNFVVKPQGPAENRAGFAFVREVKDSAKKVRLIPFTY-----SV 75 (681) Q Consensus 1 M~~~~~~q~~f~~GElsP~l~~R~D~~~y~~~~~~~~N~~~~~~Gg~~rRpG~~~v~~~~~~~~~~rlipf~~-----~~ 75 (681) ||++....+||.+| +++|.|++||++||++|+||++.|+||++||||++||+++++.. +.+++||.| ++ T Consensus 1 M~~i~~~~~nl~gG-----vSqq~d~~r~~~q~~~~~N~~~~~~gG~~rRpgt~~va~~~~~~-~~~~~~f~~~~~r~s~ 74 (826) T protein:vir:78 1 MSYKQSAYPNLLMG-----VSQQVAFERLPGQLSEQINMVSDPVSGLRRRSGIELMASLLHTD-QPWPRPYLYHTNLGGR 74 (826) T ss_pred Ccceeeecchhccc-----eecccchHhhhhhhhhhhcceeccccccccCCchHhhhhhccCC-cCCceeEEEEeccCCc Confidence 99999999999999 89999999999999999999999999999999999999998875 468999988 78 Q ss_pred CCeEEEEEcCCEEEEEe-CCcEEeeCCEEEEEeCCCCchhhceeeEEEeccEEEEEcCCcceEE-EEECCCCcEEEEEEe Q lcl|Aclame:pro 76 TQTMVIELGAGYFRFHT-NGGTLLDGAVPYEIANPYAEADLFNIHYVQSADVLTLVHPNYAPRE-LRRLGATNWQLATIA 153 (681) Q Consensus 76 ~~~y~lefg~~~irv~~-~~~~v~~~~~~~~i~TPy~~a~l~~l~~~qsaD~l~lvh~~~~p~~-l~R~~~~~W~~~~~~ 153 (681) +|+|+|||++++||||. .+|.++..+ + ..++||+++++++|+|+|+||+|||+|++++|+. +.+....+|....+. T Consensus 75 e~~~~l~~~~g~irv~~~~~g~~~~~~-~-~~~~y~~~~~~~~l~~~t~aD~~fi~n~~~~p~~~~~~~~~~~~~~~~~~ 152 (826) T protein:vir:78 75 SIAMLVAQHRGELYLFDEKDGRLLMGQ-P-LVHDYLKASDYRQLRAATVADDLFIANLEVRPEADKADVLGVDPSKTGWL 152 (826) T ss_pred ceEEEEEEcCCcEEEEECCCCEEEEec-C-cccceeecCCcceeEEEEEcCEEEEEcCcEeeeeccccccCCCCCceEEE Confidence 89999999999999995 555444322 1 2478899999999999999999999999999975 445544445433332 Q ss_pred e-ccCccc------------ccccc----eeeecCcc-------------------------------eeeEE-----E- Q lcl|Aclame:pro 154 F-TSPVAT------------PTSVT----ATSNNKGT-------------------------------DYTYR-----Y- 179 (681) Q Consensus 154 f-~~~~~~------------~~~~t----~t~~~~~~-------------------------------~~t~~-----~- 179 (681) + ..+++. ...++ .+...... .+... + T Consensus 153 ~v~~g~y~~~y~v~i~~~~~~~~~~~s~t~~y~t~~~~~~~~~~~~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~t~~~~ 232 (826) T protein:vir:78 153 YIKAGQYSKAFSLTIKVKDNATGTTYSHTATYVTPDNASTNPNLAEAPFQTSVGYIAWQLFGKFFGAPEYTLPNSTKKYP 232 (826) T ss_pred EecccccCceeEEEeccceeecccccceeEEEEeccCCccccccccccceecchhhheecceeeccccceeeeccceeEe Confidence 2 111110 00000 00000000 00000 0 Q ss_pred -----------------------EE--------------------------EEEEeccceEEe-c--------------- Q lcl|Aclame:pro 180 -----------------------VV--------------------------TALDAEGKTESA-P--------------- 194 (681) Q Consensus 180 -----------------------~v--------------------------~a~~~~g~~~s~-~--------------- 194 (681) .. ..+......+.. + T Consensus 233 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~l~a~~p~~~~~~~~~~~~~~~ 312 (826) T protein:vir:78 233 KVDPDPAAATVAGYLNQRGVQDGYIAFRGDGDIVVEVSTDMGNNYGIASGGMSLNATADLPALLPGAGTPGTGVQFMDGA 312 (826) T ss_pred eccccccceeeccceeecccccceEEEecCCCeEEEeccCCCccceEEEeeEEEecccceeeeecccccceEEEEEEeee Confidence 00 000000000000 0 Q ss_pred -CcccceeccceeccceeeeEEeeccCCceeeeecccceeEEEe-eccceeEEEeccccccccccccccccCccccCCce Q lcl|Aclame:pro 195 -SSAGTCTNNLFTNGGANTIAWSASSGASRYNVYKEQGGLYGYI-GQTTGTSLVDDNIAPDLSVTPPIYDAVFNAAGDYP 272 (681) Q Consensus 195 -s~~~t~~~~~~~~~~~~~~~w~a~~~~~~~~v~~~~~~~~~~~-~~~~~t~~~~~~~~~~~~~~~~~~~~~~s~~~g~p 272 (681) ...+...+++|......+..|.++.+... .+...++.+.++ ..+++++......|.++.++++.++|.+++.+.|| T Consensus 313 ~~~~g~~~~~~y~~~~~~~~~w~e~a~~g~--~~~~~tmp~~l~~~~~~~~f~~~~~~w~~r~~gd~~tnp~psf~g~~i 390 (826) T protein:vir:78 313 IMATGSTKAPVYFAWDAANRRWAERAAYGT--DWVLKKMPLALRWDESTDTYSLNELEYDRRGSGDEETNPTFNFVKRGI 390 (826) T ss_pred EecCCCcccceeEEEEcCCceEEEeeccCc--ccccccccEEEEEecCCCeEEEeeccccccccCcccccCcccccCCCc Confidence 00111112233333334455666554432 133345666665 34566666677779999999999999999999999 Q ss_pred eEEEEEcCeEEEEecCCCccEEEEEeccChhcccccC--CCcCCccEEEEEcCCCceEEEEEeecC-cEEEEecCcEEEE Q lcl|Aclame:pro 273 AAVSYFEQRRCFAGTTNKPQNIWMTRSGTESAMSYSL--PVRDDDRVAFRVAAREANAIRHIVPLT-ELLLLTSSGEWRV 349 (681) Q Consensus 273 ~~v~f~~~RL~~~~~~~~p~~v~~S~~gd~~nF~~~~--~~~D~D~i~~~~~~~~~~~i~~~~~~~-~Llv~t~~~e~~~ 349 (681) ++|+||||||+|++ ||+|||||+||||||++++ ++.|||||+++++++|++.|+|+++++ +|+|||+++||+| T Consensus 391 ~~v~f~q~RL~f~~----~~~v~~Srtgd~~nF~~~t~~~~~DdD~I~~~~~s~~~~~i~~~v~~~~~L~l~T~~~e~~l 466 (826) T protein:vir:78 391 TGMTTFQGRLVLLS----QEYVCMSASNNPHRWFKKSAAALNDDDPIEIAAQGSLTEPYEHAVTFNKDLIVFAKKYQAVV 466 (826) T ss_pred eEEEEEeceEEEee----CCeEEEEeccCccccccccccCCCCCCcEEEEEccCcceeEEEEEecCCcEEEEecCcEEEE Confidence 99999999999995 7999999999999999875 678999999999999999999999985 7999999999999 Q ss_pred ecCCCcccccceeEEEEeeccCCc-ccccEEeCCeEEEEEcCCC---EEEEEEEeeecc-ceeccchhhhhHHhcCCCCE Q lcl|Aclame:pro 350 ASVNSDAVTPTTISVRPQSYVGAT-DVQPVVVNNTTIYGAARGG---HVRELAYNWQAN-GFVTGDLSLRAAHLFDNLDI 424 (681) Q Consensus 350 ~~~~~~~ltP~~~~~~~~s~~g~~-~~~Pv~vg~~v~fv~~~g~---~vre~~~~~~~~-~~~~~dlt~~~~hl~~~~~~ 424 (681) ++ +++|||+|++++++|.|+++ .|+|+.+|++++|++++|+ +||||.|+.+.+ .|+++|||.|++||+++ ++ T Consensus 467 ~~--~~~lTP~~~~~~~~s~~~~~~~~~Pv~vG~~v~F~~~r~~~~s~v~e~~~~~~~~~~y~~~dlt~~~~~l~~~-~v 543 (826) T protein:vir:78 467 PG--GGIVTPRTAVISITTQYDVDTRAAPAVTGRSVYFAAERALGFMGLHEMAPSPSTDSHYVAEDVTSHIPSYMPG-PA 543 (826) T ss_pred eC--CCcccceeEEEEEEEeecccCCCCceEeCCeEEEEecCCCceeEEEEEEeeecccCccchHHHHHHHHHhcCC-Ce Confidence 87 45999999999999999975 6999999999999988773 799999996666 59999999999999997 89 Q ss_pred EEEEEecCCCEEEEEEcCCCeEEEEEEe---cccceEEEEEeccCCceEEEEEEeeCCCCEEEEEEEECCCCceEEE-Ee Q lcl|Aclame:pro 425 LDMAYAKAPQPIVWFISSSGKLLGLTYV---PEQQIGAWHQHDTDGVFESCAVVAEGNEDRLYAVVRRTIGGNEVRY-VE 500 (681) Q Consensus 425 ~~~~~~~~p~~~~~~~~~dg~l~~~ty~---~~q~v~aW~~w~~~g~~~~v~~~~~~~~d~l~~~v~r~~~g~~~~~-ie 500 (681) .+|++|++|++++|++++||+|++|+|+ +||+|+|||||+++|+|++||++ +|+||++|+|+++++..|+ +| T Consensus 544 ~~~a~s~~~~~~v~~~~~~g~l~~~ty~~~~~e~~v~aW~~~~~~g~v~~v~~i----~d~l~~vv~r~~~~~~~r~~~~ 619 (826) T protein:vir:78 544 EYIQAAASSGYLVFGTSAADEMICHQYLWQGNEKVQNAYHRWTLRHQIIGAYFT----GDNLMVLIQKGQEIALGRMHLN 619 (826) T ss_pred EEEEEeCCCCeEEEEEcCCCeEEEEEEEecCCcEEEEeEEEEccCCcEEEEEEE----CCeEEEEEEeCCCEEEEEEEEE Confidence 9999999999999999999999999997 78889999999999999999998 7899999999999988877 88 Q ss_pred eccCcccc-ccccceEeecceeeccC------cceee---ccCCccCCcEEEEEeCCeeeccEeecCCEEEe--C--CCC Q lcl|Aclame:pro 501 RMASRQFD-AQADAFFVDSGLTYSGE------PVSHI---SGLEHLEGKTVSILADGAVHPQRVVTDGAIDL--D--VEA 566 (681) Q Consensus 501 ~~~~~~~~-~~~~~~~lD~~~~y~~~------~~~~~---~gl~~l~G~~v~v~adG~~~~~~~v~~g~i~l--~--~~~ 566 (681) +++..... .....++.++...+++. ..+.+ .++.|++|+.+.+..++...... ..++.+++ + ..+ T Consensus 620 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~ 698 (826) T protein:vir:78 620 SLPAREGLQYPKYDYWRRIEATVDGELELTKQHWDLIKDGAAVYQLQPQVGAYMERYQLGVKR-ETSTKVFLDVPEAVVG 698 (826) T ss_pred ecCCCccccccccceeEEEEEEEcceeccccceeEEecCCceeeeeccceeeeccccceeccc-cCCCceEEEeCCCccc Confidence 88765432 23334555555544433 22222 34567788777766666554333 34555444 3 347 Q ss_pred CeEEEeeecceeEEecceEecCCCccccc-ceeEEEEEEEEEeccccEEEecCCCeeEE-eee------ecccccC-CcC Q lcl|Aclame:pro 567 GTVHIGLPITAELQTLPVAMQLDGSFGQG-RVKNINKLWLRVHRSSGIFAGPHADALTE-VKQ------RTSEPYG-SPP 637 (681) Q Consensus 567 ~~v~vG~~y~~~v~~~p~~~~~~~~~~~~-~~~~i~rv~l~~~~S~~~~v~~~~~~~~~-~~~------~~~~~~~-~~~ 637 (681) ++|+||++|+++++++||+++.+++..++ .|+||+|++|++.+|+.+.++++....+. +.+ +....+. .+| T Consensus 699 ~~v~VGl~y~s~~~~~~~~~~~~~g~~~~~~r~~l~r~~~~~~~tg~~~v~v~~~~~~~~~~~~~~~~~~~~~~l~~g~~ 778 (826) T protein:vir:78 699 SVYVVGCEFWSKVEFTPPVLRDHNGLPMTSTRAVLHRYNVNFGWTGEFLWRISDTARPNQPWYDTTPLRLSSRQLNAGEP 778 (826) T ss_pred cEEEEeeceeEEEEeCceEEecCCCcceeecceEEEEEEEEeeccccEEEEeCCCccCcceeeeecccccccccccCCcc Confidence 89999999999999999999988887665 46899999999999999998876543221 111 1233333 344 Q ss_pred CcccceEEEEecCCcCcceEEEEEECCccCEEEEEEEEEEEEcC Q lcl|Aclame:pro 638 ALKSEEIPLVLSPKWGDSGQLFVRQADPLPLMIVSMSAEIAIGA 681 (681) Q Consensus 638 ~~~tG~~~v~~~~~~~~~~~v~I~~~~P~P~tvlai~~ev~vg~ 681 (681) .+.+|++++|+. +|+++.+|+|+|+.|+||+|++|+||....= T Consensus 779 ~~~t~~v~vp~~-~~~~~~~i~i~~d~P~P~tvlai~~~~~y~~ 821 (826) T protein:vir:78 779 LVDSAVVPLPAR-VDMATSKFELSCHSPYDMNVRAVEYNFKSNQ 821 (826) T ss_pred cccceEEEEeee-ccCceEEEEEEeCCCCcEEEEEEeEEEEecc Confidence 556999999875 6899999999999999999999999997665 No 19 >protein:vir:7021 Length: 803 # NCBI annotation: tail protein # Family: family:all:825 # MgeID: mge:141 # MgeName: SP6 # Cross-refs: genbank:acc:NP_853594;genbank:gi:31711676;genbank:GeneID:1481802 Probab=100.00 E-value=5.9e-154 Score=860.65 Aligned_cols=662 Identities=12% Similarity=0.085 Sum_probs=504.0 Q ss_pred CCcceEeecccccccccchhcccchHHHHHHHHhhhhccEEeeccCeeeCCchheeeecCCCcCceEEEEEEe----CCC Q lcl|Aclame:pro 1 MSNVRVLQRSFGGGEISPEMFGRIDDVKYQSGLAICRNFVVKPQGPAENRAGFAFVREVKDSAKKVRLIPFTY----SVT 76 (681) Q Consensus 1 M~~~~~~q~~f~~GElsP~l~~R~D~~~y~~~~~~~~N~~~~~~Gg~~rRpG~~~v~~~~~~~~~~rlipf~~----~~~ 76 (681) |. +....+||.+| +++|.|++||++||++|+||+++|+||++||||++||+++++.+++.+|+|+.+ +++ T Consensus 1 ~~-v~~s~~nl~~G-----vSqQ~d~~R~~~q~~~~~N~~~~~~gGl~rRpGt~~va~l~~~~~~~~~~~~~~~~~~~~e 74 (803) T protein:vir:70 1 ME-VQGSLGRQIQG-----ISQQPPAVRLDGQCSEMVNMVPDVVEGTKSRMGTTHIAKLLEYGEDDMAVHHYRRGGEGEE 74 (803) T ss_pred Ce-EEeecchhccc-----cccCchHHhhhhhhhhhhcceeeeccccccCChhhhhhhhcCCCcccceeeEEEecCCCce Confidence 87 77788999999 899999999999999999999999999999999999999999888999999765 467 Q ss_pred CeEEEEEcCCEEEEEeCCc-EEe-eCCEEEEEeCCCCchhhceeeEEEeccEEEEEcCCcceEEEEECCC--CcE----- Q lcl|Aclame:pro 77 QTMVIELGAGYFRFHTNGG-TLL-DGAVPYEIANPYAEADLFNIHYVQSADVLTLVHPNYAPRELRRLGA--TNW----- 147 (681) Q Consensus 77 ~~y~lefg~~~irv~~~~~-~v~-~~~~~~~i~TPy~~a~l~~l~~~qsaD~l~lvh~~~~p~~l~R~~~--~~W----- 147 (681) |+|+|||++++||||+.+| .++ ++..++....|+++.+.++|+++|+||+|||+|++++|+.-.+... ..| T Consensus 75 ~~~~~~~~~~~irv~~~~G~~~~v~~~~~~~~~l~~~~~~~~~l~~~tvaD~~fi~n~~~~~~~~~~~~~~~~~~~~~~v 154 (803) T protein:vir:70 75 EYFFIMKKGQVPEIFDKQGRKCMVQSQDAPMTYLSEVTNPREDVQFMTIADVTFMLNRKKIVKARPERSPQVGSTAIVFM 154 (803) T ss_pred EEEEEEecCCeEEEEEcCCcEEEEecCCceeEEEeecCCChhheeEEEEcCEEEEecCceeeeeccccCCCCCCceEEEE Confidence 9999999999999997444 333 4455666667788888899999999999999999999975433221 122 Q ss_pred ------EEEEEeeccCccc----ccccc-------------------eeeecCcceeeEEEEE----------------E Q lcl|Aclame:pro 148 ------QLATIAFTSPVAT----PTSVT-------------------ATSNNKGTDYTYRYVV----------------T 182 (681) Q Consensus 148 ------~~~~~~f~~~~~~----~~~~t-------------------~t~~~~~~~~t~~~~v----------------~ 182 (681) +.-.+..+....+ +.+.. .....+...++..... . T Consensus 155 r~g~y~~~y~itIng~~~a~~~t~~~~~~~~~~~~~~~~ia~~l~~~~~~~~s~a~~~~~~~g~~~~i~~~~~~~~~~~~ 234 (803) T protein:vir:70 155 AYGQYGTHYKIIIDGVVAAGYKTRDGAEAHHIEDIRTESIAYNLYQSLQSWDKIADYEIQLDGTSIYITRRDGSTTFDIT 234 (803) T ss_pred eecCCcceEEEEeCCcceEEEEeCCCcccccccccchhhhhhhhhhheeccccccceEEEECCcEEEEEEcCCCCeeEEE Confidence 1111222111100 00000 0000000011111000 0 Q ss_pred EEEeccce-EEe----------------------cCcccce-eccceec---cceeeeEEeeccCCceeeeecccceeEE Q lcl|Aclame:pro 183 ALDAEGKT-ESA----------------------PSSAGTC-TNNLFTN---GGANTIAWSASSGASRYNVYKEQGGLYG 235 (681) Q Consensus 183 a~~~~g~~-~s~----------------------~s~~~t~-~~~~~~~---~~~~~~~w~a~~~~~~~~v~~~~~~~~~ 235 (681) ..+..++. ... ....++. .+.+|.. .+.+..+|.++........+...++.+. T Consensus 235 t~~g~~~~~~~~~~~~v~~~~~Lp~~~~~g~~v~v~~~g~~~~d~y~v~~~~~~~~~~~w~e~a~~g~~~~~~~~t~p~~ 314 (803) T protein:vir:70 235 TEDGAKGKDLVAIKYKVASTDLLPSRAPEGYKVQVWPTGSKPESRYWLQAEKQNGNIVSWKETLAADVLIGFDKSTMPYI 314 (803) T ss_pred eecCcCCcEEEEEEecccceeeccccCCCCceEEEEcCCCCCCceeeEEEEeccCCccceEeeeccceeeeeecccccEE Confidence 00000000 000 0001111 1222322 2223457888888888777888888888 Q ss_pred Eeeccc----eeEEEeccccccccccccccccCccccC----CceeEEEEEcCeEEEEecCCCccEEEEEeccChhcccc Q lcl|Aclame:pro 236 YIGQTT----GTSLVDDNIAPDLSVTPPIYDAVFNAAG----DYPAAVSYFEQRRCFAGTTNKPQNIWMTRSGTESAMSY 307 (681) Q Consensus 236 ~~~~~~----~t~~~~~~~~~~~~~~~~~~~~~~s~~~----g~p~~v~f~~~RL~~~~~~~~p~~v~~S~~gd~~nF~~ 307 (681) ++.... +........|..+.++++.++|.|++.+ +||++|+||||||+|++ ||+|||||+||||||++ T Consensus 315 ~v~~~~~~~~~~~~~~~~~~~~r~~gdd~tnp~psf~~~~~~~~~~~v~f~q~RL~f~~----~~~v~~Srtgd~~nF~~ 390 (803) T protein:vir:70 315 IERTGFVNGIAQFKIRQGDWEDRKVGDDLTNPMPSFIDEEVPQTLGGMFMVQNRLCVTA----GEAVIATRTSYFFDFFR 390 (803) T ss_pred EEEEEEeecceeEEEEeeccccccccccccCccccccCccCCCCceeEEEEeceEEEee----CCeEEEEccCCcccccc Confidence 876543 3344555557788888888888888765 79999999999999995 79999999999999999 Q ss_pred cC--CCcCCccEEEEEcCCCceEEEEEeecC-cEEEEecCcEEEEecCCCcccccceeEEEEeeccCCc-ccccEEeCCe Q lcl|Aclame:pro 308 SL--PVRDDDRVAFRVAAREANAIRHIVPLT-ELLLLTSSGEWRVASVNSDAVTPTTISVRPQSYVGAT-DVQPVVVNNT 383 (681) Q Consensus 308 ~~--~~~D~D~i~~~~~~~~~~~i~~~~~~~-~Llv~t~~~e~~~~~~~~~~ltP~~~~~~~~s~~g~~-~~~Pv~vg~~ 383 (681) ++ +++|||||+++++++++++|+|+++++ +|+|||+++||+|++ +++|||+|++++++|+|+++ .++|+.+|++ T Consensus 391 ~t~~~~~DdD~I~~~~ss~~~~~i~~~v~~~~~L~i~T~~~q~~l~g--~~~lTP~~~~i~~~s~~~~~~~~~Pv~vg~~ 468 (803) T protein:vir:70 391 YTAVSAVATDPFDVFSDASEVYQLKHAVTLDGSTVLFADKSQFILPG--DKPLEKSNVLLKPVTTFEVNNNVKPVATGES 468 (803) T ss_pred ccccCCCCCccEEEEecCCcceeeEEEeecCCcEEEEecCcEEEEeC--CCcccceeEEEEEEEEeeccCCCccEEeCCe Confidence 75 668999999999999999999999995 799999999999987 45999999999999999775 6999999999 Q ss_pred EEEEEcCCC--EEEEEEEeeeccceeccchhhhhHHhcCCCCEEEEEEecCCCEEEEEE-cCCCeEEEEEEe---cccce Q lcl|Aclame:pro 384 TIYGAARGG--HVRELAYNWQANGFVTGDLSLRAAHLFDNLDILDMAYAKAPQPIVWFI-SSSGKLLGLTYV---PEQQI 457 (681) Q Consensus 384 v~fv~~~g~--~vre~~~~~~~~~~~~~dlt~~~~hl~~~~~~~~~~~~~~p~~~~~~~-~~dg~l~~~ty~---~~q~v 457 (681) ++|+|++|+ +||||+|++++|+|+++|||+|++||+++ ++.+++++++|+.++|++ .++++|++|+|+ +||+| T Consensus 469 v~fv~~~g~~s~vre~~~~~~~d~y~a~Dlt~~a~hl~~~-~v~~~~~~~~~~~~v~~~~~~~~~l~~~~yl~~~~e~~v 547 (803) T protein:vir:70 469 VMFATSEGAYSGIREFYTDSYSDTKKAQAITSHVNKLLEG-NVIMMSASTNVNRLLVLTDKYRNIIYCYDWLWQGTERVQ 547 (803) T ss_pred EEEeccCCCeeEEEEEeccccccceehhhhhhhhHhhcCC-ceEEEEEeCCCCeEEEEEEcCCCeEEEEEEEecCCcEEE Confidence 999999995 69999999999999999999999999997 789999999888777555 567899999997 88999 Q ss_pred EEEEEeccCCceEEEEEEeeCCCCEEEEEEEECCCCceEEEEeeccCccc--cccccceEeecceeeccCc---ceeecc Q lcl|Aclame:pro 458 GAWHQHDTDGVFESCAVVAEGNEDRLYAVVRRTIGGNEVRYVERMASRQF--DAQADAFFVDSGLTYSGEP---VSHISG 532 (681) Q Consensus 458 ~aW~~w~~~g~~~~v~~~~~~~~d~l~~~v~r~~~g~~~~~ie~~~~~~~--~~~~~~~~lD~~~~y~~~~---~~~~~g 532 (681) +|||||+|+|.++++|+++. +|+||++|+|+++| .|||+|+.... ....+++||||+.+|.+.. ...++. T Consensus 548 ~aW~r~~~~g~~~~~~~~~~--~d~l~~vv~r~~~g---~~ier~~~~~~~~~~~~~~~~lD~~~~~~~~~~~~~~~~~~ 622 (803) T protein:vir:70 548 AAWHKWEWPLGTFIRGMFYS--GEHLYLLIERGSTG---VYLERMDMGDALVYNLNDRIRMDRQAELIFRHIKAEDVWVS 622 (803) T ss_pred EeEEEEEcCCCEEEEEEEec--CCEEEEEEEECCCe---EEEEEEecccccccCCcceeEeccceeEeeccccCCceeee Confidence 99999999999999999874 78999999999887 58999986543 3456789999999877642 233444 Q ss_pred CCccCCcE------------EEEEeCCeeecc-------EeecCCEEEeCCCCCeEEEeeecceeEEecceEecCCCccc Q lcl|Aclame:pro 533 LEHLEGKT------------VSILADGAVHPQ-------RVVTDGAIDLDVEAGTVHIGLPITAELQTLPVAMQLDGSFG 593 (681) Q Consensus 533 l~~l~G~~------------v~v~adG~~~~~-------~~v~~g~i~l~~~~~~v~vG~~y~~~v~~~p~~~~~~~~~~ 593 (681) +.|+++.+ .....+|.++.. ..+..+.+++++++++++|||+|+++++++||+++.+++.. T Consensus 623 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~g~~t~~~~~~~~~~~~~a~~v~VGl~Y~~~~~~~~~~i~~~~~~~ 702 (803) T protein:vir:70 623 EPLPWQPTDVTLLDCVLIDGWDSYIGGSFLFSYNPGDNTLTTTFDMHDDDHVKAKVVVGQLYPQEFEPTQVVIRDNQERV 702 (803) T ss_pred ecccccCcccceeeEEEeeeeeeecCCeEEEEEcCCCccceeeeeEECCCCcccEEEEeeeeeEEEeecceEEEcCCCcc Confidence 55554433 223334444332 23445678899999999999999999999999998666554 Q ss_pred c-cceeEEEEEEEEEeccccEEEecCCCeeE--Eeeeeccccc------CCcCCcccceEEEEecCCcCcceEEEEEECC Q lcl|Aclame:pro 594 Q-GRVKNINKLWLRVHRSSGIFAGPHADALT--EVKQRTSEPY------GSPPALKSEEIPLVLSPKWGDSGQLFVRQAD 664 (681) Q Consensus 594 ~-~~~~~i~rv~l~~~~S~~~~v~~~~~~~~--~~~~~~~~~~------~~~~~~~tG~~~v~~~~~~~~~~~v~I~~~~ 664 (681) + ..++||+|++|++++|+++.+.+...... +...+++..+ .+.++++||+++||+. +|+++.+|+|+|++ T Consensus 703 ~~~~~~rl~r~~~~~~~sg~~~v~v~~~~~~~~~~~~~s~~~~g~~~~~~g~~~~~tg~~~vP~~-~~~~~~~v~i~~d~ 781 (803) T protein:vir:70 703 SYIDVPTVGLVHLNLDKYPDFKVEVKNLKSGKVRNVLASNRVGGAINNIVGYVEPREGVFKFPLR-SLSTDTVYRVMVES 781 (803) T ss_pred ccccccEEEEEEEEeecccceEEEEecCCccccceeeccchhccccccccCccccccceEEEEee-ccCcceEEEEEECC Confidence 4 46789999999999999988765543322 2222333332 3447899999999984 68999999999999 Q ss_pred ccCEEEEEEEEEEEEcC Q lcl|Aclame:pro 665 PLPLMIVSMSAEIAIGA 681 (681) Q Consensus 665 P~P~tvlai~~ev~vg~ 681 (681) |+||+|+||+||....= T Consensus 782 P~P~tvlsi~weg~y~~ 798 (803) T protein:vir:70 782 PHTFQLRDIEWEGSYNP 798 (803) T ss_pred CCCeEEEEEEEEEEEec Confidence 99999999999999977 No 20 >protein:vir:97014 Length: 800 # NCBI annotation: 33 # Family: family:all:825 # MgeID: mge:1644 # MgeName: K1-5 # Cross-refs: genbank:acc:YP_654134;genbank:gi:108862018;genbank:GeneID:5075963 Probab=100.00 E-value=3.8e-153 Score=856.18 Aligned_cols=660 Identities=12% Similarity=0.101 Sum_probs=502.4 Q ss_pred CCcceEeecccccccccchhcccchHHHHHHHHhhhhccEEeeccCeeeCCchheeeecCCCcCceEEEEEEe---CCCC Q lcl|Aclame:pro 1 MSNVRVLQRSFGGGEISPEMFGRIDDVKYQSGLAICRNFVVKPQGPAENRAGFAFVREVKDSAKKVRLIPFTY---SVTQ 77 (681) Q Consensus 1 M~~~~~~q~~f~~GElsP~l~~R~D~~~y~~~~~~~~N~~~~~~Gg~~rRpG~~~v~~~~~~~~~~rlipf~~---~~~~ 77 (681) |. +....+||.+| +++|.|++||++||++|+||+++|+||++||||++||+.+++.++++||+||.+ +.+| T Consensus 1 ~~-v~~s~~n~~~G-----vSqq~d~~R~~~q~~~~~N~~~~~~gGl~rRpGt~fva~l~~~~~~~~~~~~~~~~d~~eq 74 (800) T protein:vir:97 1 ME-VQGSLGRQIQG-----ISQQPPAVRLDGQCTAMVNMIPDVVNGTQSRMGTTHIAKILDAGTDDMATHHYRRGDGDEE 74 (800) T ss_pred Ce-eEeechhhhcc-----cccCchhHhhhhhhhhhhcceeccccccccCCchhhheeecCCCcccceeEEEEEcCCceE Confidence 88 67788999999 899999999999999999999999999999999999999999999999999988 5689 Q ss_pred eEEEEEcCCEEEEEeCCcEEe--eCCEEEEEeCCCCchhhceeeEEEeccEEEEEcCCcceEEEEEC--CCCcEEEEEEe Q lcl|Aclame:pro 78 TMVIELGAGYFRFHTNGGTLL--DGAVPYEIANPYAEADLFNIHYVQSADVLTLVHPNYAPRELRRL--GATNWQLATIA 153 (681) Q Consensus 78 ~y~lefg~~~irv~~~~~~v~--~~~~~~~i~TPy~~a~l~~l~~~qsaD~l~lvh~~~~p~~l~R~--~~~~W~~~~~~ 153 (681) .|+|||++++||||+.+|..+ ++..+++...|+++.++++|+++|+||++||+|++++|+...|. ++..|.+..+. T Consensus 75 ~~v~~~~~~~~rv~~~~G~~~~v~~~~~~~~y~~~~~~~~~~l~~~tvaD~~fi~n~~~~~~~~~~~~~~~~~~~~~~v~ 154 (800) T protein:vir:97 75 YFFTLKKGQVPEIFDKYGRKCNVTSQDAPMTYLSEVVNPREDVQFMTIADVTFMLNRRKVVKASSRKSPKVGNKAIVFCA 154 (800) T ss_pred EEEEEEcCCEEEEEecCCcEEEEecCCcceEEEeccCCCccceeEEEEcCEEEEeeCceecccccccccCCCcceEEEEe Confidence 999999999999998777433 44445555556677889999999999999999999999876543 45555443321 Q ss_pred ---ec----cCcccccccce-e--------------------------eecCcceeeEEE---------------EEEEE Q lcl|Aclame:pro 154 ---FT----SPVATPTSVTA-T--------------------------SNNKGTDYTYRY---------------VVTAL 184 (681) Q Consensus 154 ---f~----~~~~~~~~~t~-t--------------------------~~~~~~~~t~~~---------------~v~a~ 184 (681) |. .....+...+. + ...+...++... .+... T Consensus 155 ~g~y~~~y~i~I~~~~~~~~~t~~~t~~~~~~~~~~~~ia~ql~~~~~~~~~~~~~t~~~~G~~~~i~~~~~~~~~v~t~ 234 (800) T protein:vir:97 155 YGQYGTSYSIVINGANAASFKTPDGGSADHVEQIRTERITSELYSKLQQWSGVSDYEIQRDGTSIFIERRDGASFTITTT 234 (800) T ss_pred ecccceeeeeccCCcceEEEEEcCCCCcccceeccHHHHHHHHHHhhhccccccceEEEeCCcEEEEEEcCCceEEEEec Confidence 10 00000000000 0 000000011100 00000 Q ss_pred Eeccce------------------------EEecCcccceecccee---ccceeeeEEeeccCCceeeeecccceeEEEe Q lcl|Aclame:pro 185 DAEGKT------------------------ESAPSSAGTCTNNLFT---NGGANTIAWSASSGASRYNVYKEQGGLYGYI 237 (681) Q Consensus 185 ~~~g~~------------------------~s~~s~~~t~~~~~~~---~~~~~~~~w~a~~~~~~~~v~~~~~~~~~~~ 237 (681) +..... ..+.+......+.+|. ....+..+|.++.+......+...++.+.++ T Consensus 235 ~g~~~~~~~~~~~~v~~~~~lp~~~~~g~~v~i~~~~~~~~~~y~~~~~~~~~~~~~w~e~~~~~~~~~~~~~tmp~~~~ 314 (800) T protein:vir:97 235 DGAKGKDLVAIKNKVSSTDLLPSRAPAGYKVQVWPTGSKPESRYWLQAEPKEGNLVSWKETIAADVLLGFDKGTMPYIIE 314 (800) T ss_pred CCcCceeeeEEeeeccchhhchhhCCCCcEEEEEccCCCCCceEEEEEEecccCcceEEEeeccccccceecccceEEEE Confidence 000000 0000000001111221 1223345677776666655566667777766 Q ss_pred ec----cceeEEEeccccccccccccccccCccccC----CceeEEEEEcCeEEEEecCCCccEEEEEeccChhcccccC Q lcl|Aclame:pro 238 GQ----TTGTSLVDDNIAPDLSVTPPIYDAVFNAAG----DYPAAVSYFEQRRCFAGTTNKPQNIWMTRSGTESAMSYSL 309 (681) Q Consensus 238 ~~----~~~t~~~~~~~~~~~~~~~~~~~~~~s~~~----g~p~~v~f~~~RL~~~~~~~~p~~v~~S~~gd~~nF~~~~ 309 (681) .. ..++.......|.++.++++.++|.|+|.+ +||++|+||||||+|++ ||+|||||+||||||++++ T Consensus 315 ~~~~~~~~g~~~~~~~~w~~r~~gd~~tnp~p~f~~~~~~~~~~~v~f~q~RL~f~~----~~~v~~Srtgd~~nF~~~t 390 (800) T protein:vir:97 315 RTDIINGIAQFKIRQGDWEDRKVGDDLTNPMPSFIDEEVPQTIGGMFMVQNRLCFTA----GEAVIASRTSYFFDFFRYT 390 (800) T ss_pred EeecccccceeEEEeccccccccCccccCccccccCCcCCCCceeEEEEeeeEEEec----CCeEEEEecCCcccccccc Confidence 54 344555566678889999999999999887 89999999999999995 7999999999999999976 Q ss_pred --CCcCCccEEEEEcCCCceEEEEEeecC-cEEEEecCcEEEEecCCCcccccceeEEEEeeccCC-cccccEEeCCeEE Q lcl|Aclame:pro 310 --PVRDDDRVAFRVAAREANAIRHIVPLT-ELLLLTSSGEWRVASVNSDAVTPTTISVRPQSYVGA-TDVQPVVVNNTTI 385 (681) Q Consensus 310 --~~~D~D~i~~~~~~~~~~~i~~~~~~~-~Llv~t~~~e~~~~~~~~~~ltP~~~~~~~~s~~g~-~~~~Pv~vg~~v~ 385 (681) +++|||||+++++++|+++|+|+++++ +|+|||+++||+|++ +++|||+|++++++|+|++ +.|+|+.+|++++ T Consensus 391 ~~~~~DdD~I~~~~ss~~v~~i~~~v~~~~~L~i~T~~~q~~ls~--~~~lTP~~~~~~~~s~~~~~~~~~Pv~vG~~v~ 468 (800) T protein:vir:97 391 VISALATDPFDIFSDASEVYQLKHAVTLDGATVLFSDKSQFILPG--DKPLEKSNALLKPVTTFEVNNKVKPVVTGESVM 468 (800) T ss_pred ccCCCCCccEEEEecCCcceeeeEEeecCCcEEEEecCcEEEEeC--CCcccceeEEEEEEEeeeccCCCCcEEeCCeEE Confidence 467999999999999999999999996 799999999999987 4699999999999999976 5699999999999 Q ss_pred EEEcCCC--EEEEEEEeeeccceeccchhhhhHHhcCCCCEEEEEEecCCCE-EEEEEcCCCeEEEEEEec---ccceEE Q lcl|Aclame:pro 386 YGAARGG--HVRELAYNWQANGFVTGDLSLRAAHLFDNLDILDMAYAKAPQP-IVWFISSSGKLLGLTYVP---EQQIGA 459 (681) Q Consensus 386 fv~~~g~--~vre~~~~~~~~~~~~~dlt~~~~hl~~~~~~~~~~~~~~p~~-~~~~~~~dg~l~~~ty~~---~q~v~a 459 (681) |+|++|+ +||||+|++.+|+|+++|||+|++||+++ ++..++++++|+. ++|+.++||+|++|+|++ ||+|+| T Consensus 469 fv~~~g~~s~vre~~~~~~~d~~~a~DlT~~~~hl~~~-~v~~~~~~~~~~~~v~~~~~~~~~l~~~~y~~~~~e~~~~a 547 (800) T protein:vir:97 469 FATNDGSYSGVREFYTDSYSDTKKAQAITSHVNKLIEG-NITNMAASTNVNRLLVTTDKYRNIIYCYDWLWQGTDRVQSA 547 (800) T ss_pred EeeCCCCeeEEEEEeeeecccceehhhHHHHHHHhcCC-ceEEEEEeCCCCeEEEEEEcCCCEEEEEEEeecCCceEEEe Confidence 9999995 69999999999999999999999999997 7778888776555 668888999999999984 777899 Q ss_pred EEEeccCCceEEEEEEeeCCCCEEEEEEEECCCCceEEEEeeccCccc--cccccce------------------Eeecc Q lcl|Aclame:pro 460 WHQHDTDGVFESCAVVAEGNEDRLYAVVRRTIGGNEVRYVERMASRQF--DAQADAF------------------FVDSG 519 (681) Q Consensus 460 W~~w~~~g~~~~v~~~~~~~~d~l~~~v~r~~~g~~~~~ie~~~~~~~--~~~~~~~------------------~lD~~ 519 (681) ||||+++|.+..+|+.. .+|.||++|+|+.+ +|||||+.... ....+.+ ++|++ T Consensus 548 W~~~~~~~~~~~~~~~~--~~d~l~~vv~r~~~----~~ler~~~~~~~~~~~~~~~~lD~~~~~~~~~~~~~~~~v~~~ 621 (800) T protein:vir:97 548 WHVWKWPIGTKVRGMFY--SGELLYLLLERGDG----VYLEKMDMGDALTYGLNDRIRMDRQAELVFKHFKAEDEWVSEP 621 (800) T ss_pred EEEEecCCCeEEEEEEE--cCCeEEEEEEcCCc----EEEEEEecccCcCcccccceeccccceeeeeeeecccceEecc Confidence 99999987444333322 37899999999864 99999975332 1222233 44455 Q ss_pred eeeccCc-----ceeeccCCccCCcEEEEEeCCeeeccEeecCCEEEeCCCCCeEEEeeecceeEEecceEecCCCccc- Q lcl|Aclame:pro 520 LTYSGEP-----VSHISGLEHLEGKTVSILADGAVHPQRVVTDGAIDLDVEAGTVHIGLPITAELQTLPVAMQLDGSFG- 593 (681) Q Consensus 520 ~~y~~~~-----~~~~~gl~~l~G~~v~v~adG~~~~~~~v~~g~i~l~~~~~~v~vG~~y~~~v~~~p~~~~~~~~~~- 593 (681) ..|...+ ...+++++|++|++|. +.++...+..++..+.+++++++++|+||++|+++++|+||+++.+++.. T Consensus 622 ~~~~~~~~~~~~~~~v~g~~~~~G~~v~-~~~~~~~~~~~~~~~~~~~~~~~~~v~vGl~Y~~~~~~~p~~i~~~~g~~~ 700 (800) T protein:vir:97 622 LPWVPTNPELLDCILIEGWDSYIGGSFL-FKYNPSDNTLSTTFDMYDDSHVKAKVIVGQIYPQEFEPTPVVIRDNQDRVS 700 (800) T ss_pred ccccCCCcceeEEEEecccccccCceEE-EEecCccCcccccceEEeCCCCCcEEEEeeeeeEEEEecceEEEecCCCce Confidence 5554333 2346799999999986 44667777888888999999999999999999999999999997665544 Q ss_pred ccceeEEEEEEEEEeccccEEEecCCCeeEEeee--eccc------ccCCcCCcccceEEEEecCCcCcceEEEEEECCc Q lcl|Aclame:pro 594 QGRVKNINKLWLRVHRSSGIFAGPHADALTEVKQ--RTSE------PYGSPPALKSEEIPLVLSPKWGDSGQLFVRQADP 665 (681) Q Consensus 594 ~~~~~~i~rv~l~~~~S~~~~v~~~~~~~~~~~~--~~~~------~~~~~~~~~tG~~~v~~~~~~~~~~~v~I~~~~P 665 (681) ..+++||+|++|++.+|+++++.++.....++.. +.+. .....++++||++++|+. +|+++.+|+|+|++| T Consensus 701 ~~~r~~i~r~~~~~~~sg~~~~~v~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~tg~~~vp~~-g~~~~~~v~i~~d~P 779 (800) T protein:vir:97 701 YIDVPVVGLVHLNLDMYPDFSVEVKNVKSGKVRRVLASNRIGGALNNTVGYVEPREGVFRFPLR-AKSTDVVYRIIVESP 779 (800) T ss_pred eecceEEEEEEEeecccccEEEEEccccCCceeeeecCccccccccccCCccccccceEEEEee-cccceeEEEEEECCC Confidence 4578999999999999999998776654332211 1112 122346789999999985 689999999999999 Q ss_pred cCEEEEEEEEEEEEcC Q lcl|Aclame:pro 666 LPLMIVSMSAEIAIGA 681 (681) Q Consensus 666 ~P~tvlai~~ev~vg~ 681 (681) +||+|+||+||....= T Consensus 780 lP~tvlsi~~eg~y~~ 795 (800) T protein:vir:97 780 HTFQLRDIEWEGSYNP 795 (800) T ss_pred CcEEEEEEEEEEEeec Confidence 9999999999999988 No 21 >protein:vir:103341 Length: 806 # NCBI annotation: tail tubular protein B-like protein # Family: family:all:825 # MgeID: mge:1609 # MgeName: Era103 # Cross-refs: genbank:acc:YP_001039670;genbank:gi:125999999;genbank:GeneID:4818417 Probab=100.00 E-value=1.6e-151 Score=847.31 Aligned_cols=662 Identities=12% Similarity=0.090 Sum_probs=507.6 Q ss_pred CCcceEeecccccccccchhcccchHHHHHHHHhhhhccEEeeccCeeeCCchheeeecCCCcC-ceEEEEEEe-CCCCe Q lcl|Aclame:pro 1 MSNVRVLQRSFGGGEISPEMFGRIDDVKYQSGLAICRNFVVKPQGPAENRAGFAFVREVKDSAK-KVRLIPFTY-SVTQT 78 (681) Q Consensus 1 M~~~~~~q~~f~~GElsP~l~~R~D~~~y~~~~~~~~N~~~~~~Gg~~rRpG~~~v~~~~~~~~-~~rlipf~~-~~~~~ 78 (681) |= +....+||.+| +++|.|++||++||++|+||++.|+||++||||++||+.+++..+ ..+++.|.+ ++++. T Consensus 1 ~~-v~~s~~nl~~G-----vSqQ~d~~R~~~q~~~~~N~~~~~~~Gl~rRPgt~~va~l~~~~~~~~~~~~~~~~~~~~~ 74 (806) T protein:vir:10 1 ME-VQGSYGRQLQG-----VSQQPIAVRLPGQVTSQLNAVPNVVDGLKTRMGSKHLARILNSLDANSLIHHYKRGDDAEE 74 (806) T ss_pred Ce-eEeecchhccc-----eeccChhHhhhhhhhhhhcceeccccccccCCchhhhhhhcCCCCccceEEEEEecCCceE Confidence 64 77788999999 899999999999999999999999999999999999999986543 455666777 44689 Q ss_pred EEEEEcCCEEEEEe--CCcEEeeCCEEEEEe-CCCCchhhceeeEEEeccEEEEEcCCcceEEEEE--CCCCcEEEEEEe Q lcl|Aclame:pro 79 MVIELGAGYFRFHT--NGGTLLDGAVPYEIA-NPYAEADLFNIHYVQSADVLTLVHPNYAPRELRR--LGATNWQLATIA 153 (681) Q Consensus 79 y~lefg~~~irv~~--~~~~v~~~~~~~~i~-TPy~~a~l~~l~~~qsaD~l~lvh~~~~p~~l~R--~~~~~W~~~~~~ 153 (681) |+|+|.++.||+|. +|..+.....++.++ .+++++++.+|+++|+||++||+|++++|+++.| .++..|.+..+. T Consensus 75 y~v~~~~g~i~v~~~~~G~~~~v~~~~~~~~yl~~~~~~~~~l~~~tvaD~tfi~n~~~~~~~~~~~~~~~~~~~~v~v~ 154 (806) T protein:vir:10 75 YFVILQPGQVPVIFTVGGLACPVNTQGSAATYLSSSSLPRETTQLMTIGDYTFVLNRKMPVQARGDVTPSLDNKGLVYVA 154 (806) T ss_pred EEEEEcCCcEEEEEcCCCcEEEecCCCceEEEeccCCCCcceeeEEEEcCEEEEecCcEeeeecccccCCCCcceEEEEe Confidence 99999999999995 344444444444332 2456677899999999999999999999999976 346667654332 Q ss_pred eccCcccc-----cccc-----eeeec---------------------------CcceeeEE-----EEEEE-------- Q lcl|Aclame:pro 154 FTSPVATP-----TSVT-----ATSNN---------------------------KGTDYTYR-----YVVTA-------- 183 (681) Q Consensus 154 f~~~~~~~-----~~~t-----~t~~~---------------------------~~~~~t~~-----~~v~a-------- 183 (681) . .++.. .+.. .++.. ....++.. +.+.+ T Consensus 155 ~--g~y~~~y~i~Ing~~~a~~~t~~~~~~~~~~~~~~~~~a~~l~~~l~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~ 232 (806) T protein:vir:10 155 Y--ANFSFTYQILINGQVAAEHKTASSEDVKNEDLVRTDYVAGKLLENFNSRTASFPGFSMYQDGNVLVVDNSNGANYAL 232 (806) T ss_pred e--cccCceeeEEeccceEEEEEeccCCCcccccccchhHHHHHHHhhhcccccccceeEEEEcccEEEEecCCCCccEE Confidence 1 11100 0000 00000 00000000 00000 Q ss_pred --EEe------------------------ccceEEecCcccceeccceec---cceeeeEEeeccCCceeeeecccceeE Q lcl|Aclame:pro 184 --LDA------------------------EGKTESAPSSAGTCTNNLFTN---GGANTIAWSASSGASRYNVYKEQGGLY 234 (681) Q Consensus 184 --~~~------------------------~g~~~s~~s~~~t~~~~~~~~---~~~~~~~w~a~~~~~~~~v~~~~~~~~ 234 (681) .+. .+..........+..+.++.. ...+...|.++.+......+...++.+ T Consensus 233 ~~~~g~~~~~~~~~~~~v~~~~~lp~~~~~g~~v~i~~~~~~~~~~y~v~~~~~~~~~~~w~e~~~~~~~~~~~~~t~p~ 312 (806) T protein:vir:10 233 TTVDGADGQDLVAIRHKVTNLDTLPNRAPVGYKVQVWPTGSKPESRYWLQAESQDGSKVTWVETIAPGVRKGWNAATMPH 312 (806) T ss_pred EEeeCCCCceeEEeecccCccccCccccCCCcEEEEeccCCCCCCceEEEEEeeccCceEEEeecccccccceeccccce Confidence 000 000000000001111222211 233456788888887777788888888 Q ss_pred EEeecc-----ceeEEEeccccccccccccccccCccccC----CceeEEEEEcCeEEEEecCCCccEEEEEeccChhcc Q lcl|Aclame:pro 235 GYIGQT-----TGTSLVDDNIAPDLSVTPPIYDAVFNAAG----DYPAAVSYFEQRRCFAGTTNKPQNIWMTRSGTESAM 305 (681) Q Consensus 235 ~~~~~~-----~~t~~~~~~~~~~~~~~~~~~~~~~s~~~----g~p~~v~f~~~RL~~~~~~~~p~~v~~S~~gd~~nF 305 (681) .++... .++.......|..+.++++++++.++|.+ .+|++|+||||||+|+ +||+|||||+|||||| T Consensus 313 ~~v~~~~~~~~~~~~~~~~~~w~~r~~Gd~~tn~~psF~~~~~~~~it~v~f~q~RL~f~----s~~~v~~Srsgd~~nF 388 (806) T protein:vir:10 313 VLVRESLNANGSANFTYRPGEWEDRDVGDDLTNDFPSLLNDSSPQPISSMLMVQNRLMLT----SGEAVVASRTSRFFDF 388 (806) T ss_pred EEEeeeeeecccceeEEEecccccccccccccCccCcccCCCCCccceEEEEEeeeEEEe----cCCeEEEEccCCcccC Confidence 887755 33445555668888899999999999876 4678999999999999 4799999999999999 Q ss_pred cccC--CCcCCccEEEEEcCCCceEEEEEeecC-cEEEEecCcEEEEecCCCcccccceeEEEEeeccCCc-ccccEEeC Q lcl|Aclame:pro 306 SYSL--PVRDDDRVAFRVAAREANAIRHIVPLT-ELLLLTSSGEWRVASVNSDAVTPTTISVRPQSYVGAT-DVQPVVVN 381 (681) Q Consensus 306 ~~~~--~~~D~D~i~~~~~~~~~~~i~~~~~~~-~Llv~t~~~e~~~~~~~~~~ltP~~~~~~~~s~~g~~-~~~Pv~vg 381 (681) ++++ +++|||||+++++++|+|+|+|+++++ +|+|||+++||+|++ +++|||+|++++++|+|+++ .|+|+.+| T Consensus 389 ~~~t~~~~~DdD~I~~~~ss~~~~~i~~~v~~~~~L~l~t~~~q~~l~~--~~~lTP~~~~~~~~s~~~~~~~~~Pv~vG 466 (806) T protein:vir:10 389 FRYTVLATVDTDPFDVFADIEEVYNIRWSAQMDGDVVLFTSDQQFTLPG--DKPLTPTSAVIRPVTQFKMTPGVKPAPSG 466 (806) T ss_pred ccccccCCCCCccEEEEEcCCcceeeeeeeecCCcEEEEecCcEEEEeC--CCcccceeEEEEEEEeecccCCCCceEeC Confidence 9986 567999999999999999999999996 799999999999987 45999999999999999975 69999999 Q ss_pred CeEEEEEcCC--CEEEEEEEeeeccceeccchhhhhHHhcCCCCEEEEEEecCCCEEEEEEcCCCeEEEEEEe---cccc Q lcl|Aclame:pro 382 NTTIYGAARG--GHVRELAYNWQANGFVTGDLSLRAAHLFDNLDILDMAYAKAPQPIVWFISSSGKLLGLTYV---PEQQ 456 (681) Q Consensus 382 ~~v~fv~~~g--~~vre~~~~~~~~~~~~~dlt~~~~hl~~~~~~~~~~~~~~p~~~~~~~~~dg~l~~~ty~---~~q~ 456 (681) ++++|+|++| ++||||+|++++|+|+++|||+|++||++++.+.+++++++|..++|++++||+|++|+|+ +||+ T Consensus 467 ~~v~Fv~~~g~~s~vre~~y~~~~d~~~~~DlT~~~~hl~~g~~~~~~~~~~~~~~~~~~~~~dg~l~~~ty~~~~~e~~ 546 (806) T protein:vir:10 467 DSILFAFDQGSYSGIREFFTDSYSDTKKAQPATSHVDKYIRGKVLELSASSSFNRAFIITSPDRNILYVYDWLYEGTEKV 546 (806) T ss_pred CeEEEeeCCCCeeEEEEEEeeeeccceehhhHHHHHHHhcCCCeEEEEEeCCCCcEEEEEEcCCCEEEEEEEeecCCceE Confidence 9999999998 6799999999999999999999999999988888999999999999999999999999997 6788 Q ss_pred eEEEEEeccCCc--eEEEEEEeeCCCCEEEEEEEECC--CCceEEEEeeccCccccc--cccceEeecceeeccC----- Q lcl|Aclame:pro 457 IGAWHQHDTDGV--FESCAVVAEGNEDRLYAVVRRTI--GGNEVRYVERMASRQFDA--QADAFFVDSGLTYSGE----- 525 (681) Q Consensus 457 v~aW~~w~~~g~--~~~v~~~~~~~~d~l~~~v~r~~--~g~~~~~ie~~~~~~~~~--~~~~~~lD~~~~y~~~----- 525 (681) |+|||||+++|. +++|+++ +|.||++|+|++ +|..++|||+|+...... ..+.+||||+.+|.+. T Consensus 547 v~aW~rw~~~~~~~~~~~~~~----~d~l~~vv~R~~~~~g~~~~~iE~~~~~~~~~~~~~~~~~lD~~~~~~~~~~~~~ 622 (806) T protein:vir:10 547 QNAWHKWSFPAGTVLHAVSYS----NEKLYLVLTRTNTSGGVAGVYIEVMDMGDELEYGLQDRVRMDRRATLSMTYNATT 622 (806) T ss_pred EEeEEeeeeCCCeEEEEEEEe----cCeEEEEEEEcCCcccEEEEEEEeecCCCCCCcccceeeeccccceEEEeccccc Confidence 999999999876 4444443 689999999986 789999999998665443 3446789999998763 Q ss_pred ---cceeeccCCccCCcEEEEEeCCeeecc------------EeecCCEEEeCCCCCeEEEeeecceeEEecceEecC-C Q lcl|Aclame:pro 526 ---PVSHISGLEHLEGKTVSILADGAVHPQ------------RVVTDGAIDLDVEAGTVHIGLPITAELQTLPVAMQL-D 589 (681) Q Consensus 526 ---~~~~~~gl~~l~G~~v~v~adG~~~~~------------~~v~~g~i~l~~~~~~v~vG~~y~~~v~~~p~~~~~-~ 589 (681) +..++.+++|++|+++.+++||..+.+ .+++.+....++++.+|+||++|+++++++||.++. + T Consensus 623 ~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~v~~~~~~~~~~~~~v~vGl~Y~s~~~~t~p~~~~~~ 702 (806) T protein:vir:10 623 RVWTSSALPWLPQDLSSLDAVLVSGWAGYVGGAFQFSYNASNNTISTNFDLAEGNTATIVVGETYWYEVEPTPPLIKDSK 702 (806) T ss_pred cceeeeeeccccccccceeEEEEeeccccCCceEEEEEcCccceEeeeeeecCCCCcEEEEeeeeeEEEEECCeeEeccC Confidence 234567899999999999999865421 112222233356788999999999999999988754 4 Q ss_pred CcccccceeEEEEEEEEEeccccEEEecCCCe--eEEeeeec------ccccCCcCCcccceEEEEecCCcCcceEEEEE Q lcl|Aclame:pro 590 GSFGQGRVKNINKLWLRVHRSSGIFAGPHADA--LTEVKQRT------SEPYGSPPALKSEEIPLVLSPKWGDSGQLFVR 661 (681) Q Consensus 590 ~~~~~~~~~~i~rv~l~~~~S~~~~v~~~~~~--~~~~~~~~------~~~~~~~~~~~tG~~~v~~~~~~~~~~~v~I~ 661 (681) ++...++++||+|+.+++.+|+++.+.+.... ......+. .+...+.++++||+++||+. +|+++.+|+|+ T Consensus 703 ~~~~~~~r~~l~r~~~~~~~s~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~tg~~~vp~~-~~~~~~~v~i~ 781 (806) T protein:vir:10 703 DRVSYLDTPTVGNVYLNLDMYPDFSVVVTDKETLQERTVYLANKTAGSITNVIGYIAPHEGTLRIPLR-RKSTDVSFKIR 781 (806) T ss_pred CCccccccEEEEEEEEEeecceeeEEEEcccCCCcceeeeccCcccccccccccccccccceEEEEee-ecCceeEEEEE Confidence 56777899999999999999999987554322 22222222 23344557899999999985 69999999999 Q ss_pred ECCccCEEEEEEEEEEEEcC Q lcl|Aclame:pro 662 QADPLPLMIVSMSAEIAIGA 681 (681) Q Consensus 662 ~~~P~P~tvlai~~ev~vg~ 681 (681) |+.|+||+|+||+||....= T Consensus 782 ~d~P~P~tvlai~~eg~y~~ 801 (806) T protein:vir:10 782 SKSPATFQLRDIEWTGSYNP 801 (806) T ss_pred ECCCCceEEEEEEEEEEeec Confidence 99999999999999999888 No 22 >protein:vir:105647 Length: 800 # NCBI annotation: putative tail tubular B protein # Family: family:all:825 # MgeID: mge:1674 # MgeName: K1E # Cross-refs: genbank:acc:YP_425011;genbank:gi:83571759;uniprot:Q2WC41;genbank:GeneID:3837288 Probab=100.00 E-value=2.8e-151 Score=846.00 Aligned_cols=659 Identities=12% Similarity=0.101 Sum_probs=498.7 Q ss_pred CCcceEeecccccccccchhcccchHHHHHHHHhhhhccEEeeccCeeeCCchheeeecCCCcCceEEEEEEeCC----C Q lcl|Aclame:pro 1 MSNVRVLQRSFGGGEISPEMFGRIDDVKYQSGLAICRNFVVKPQGPAENRAGFAFVREVKDSAKKVRLIPFTYSV----T 76 (681) Q Consensus 1 M~~~~~~q~~f~~GElsP~l~~R~D~~~y~~~~~~~~N~~~~~~Gg~~rRpG~~~v~~~~~~~~~~rlipf~~~~----~ 76 (681) |. +....+||.+| +++|.|++||++||++|+||++.|+||++||||++||+++++.. ..++++|.+.. + T Consensus 1 ~~-v~~s~~nl~~G-----vSqQ~d~~R~~~q~~~~~N~~~~~~gGl~rRpGt~fva~l~~~~-~~~~~~~~~~~~~~~~ 73 (800) T protein:vir:10 1 ME-VQGSLGRQIQG-----ISQQPPAVRLDGQCTTMVNMVPDVVNGTQSRMGTTHIAKLLDEG-TDNMATHHYRRGEGDE 73 (800) T ss_pred Ce-EEeecchhccc-----ccccchhHhhhhhhhhhhcceeeeccCcccCCcceEEEeecCCC-CCccEEEEEecCCccc Confidence 88 67788999999 89999999999999999999999999999999999999998764 33444543332 3 Q ss_pred CeEEEEEcCCEEEEEeCCcEEeeCCEEEEEeCCC--CchhhceeeEEEeccEEEEEcCCcceEEEEECCCCcEEEEEEee Q lcl|Aclame:pro 77 QTMVIELGAGYFRFHTNGGTLLDGAVPYEIANPY--AEADLFNIHYVQSADVLTLVHPNYAPRELRRLGATNWQLATIAF 154 (681) Q Consensus 77 ~~y~lefg~~~irv~~~~~~v~~~~~~~~i~TPy--~~a~l~~l~~~qsaD~l~lvh~~~~p~~l~R~~~~~W~~~~~~f 154 (681) +.|+++|+++++|||..+|.++....+....+++ +.....+|+++|+||++||+|++++|+++.|..+..|...-+.. T Consensus 74 ~~~~~~~~g~~~rv~~~~G~~~~v~~~~~~~~~~~~~~~~~~~l~~~tvaD~tfi~n~~~~~~~~~~~~~~~~~~~~~~v 153 (800) T protein:vir:10 74 EYFFTLKKGQVPEIFDKHGRKCNVISQDAPMTYLSEVVNPREDVQFMTIADVTFMLNRRKVVKVSNRKSPKVGDKAIVFC 153 (800) T ss_pred eEEEEEEcCCeEEEEecCCcEEEeecCCcceeeeeccCCchhhEEEEEEcCEEEEecCcccccccccCCCCCCceEEEEE Confidence 4466677778999999888776543333223333 33456789999999999999999999999999999887665444 Q ss_pred ccCccccc-------ccceee-----------------------------ecCcceeeEE--------E-------EEEE Q lcl|Aclame:pro 155 TSPVATPT-------SVTATS-----------------------------NNKGTDYTYR--------Y-------VVTA 183 (681) Q Consensus 155 ~~~~~~~~-------~~t~t~-----------------------------~~~~~~~t~~--------~-------~v~a 183 (681) ...++... +..... ..+-..++.. + .+.. T Consensus 154 r~g~y~~~y~i~i~g~~~~~~~t~~~~~~~~~~~~s~~~i~~~L~~~l~~~~~~~~~t~~~~g~~i~i~~~~~~~~~~~~ 233 (800) T protein:vir:10 154 AYGQYGTSYSIIINGTTAASFKTPDGGSAEHVEQIRTERITSELYSKLQQWSGVNDYEIQRDGTSIFIERRDGKSFTVTT 233 (800) T ss_pred eccccccceeEEeccceEEEEEecCCCcccccccccHHHHHHHHHhhhhhcCcccceEEEEcCcEEEEEEecCCceEEEE Confidence 43333200 000000 0000000100 0 0000 Q ss_pred EEeccce-EE-----------ec-----------Cccccee-ccceec---cceeeeEEeeccCCceeeeecccceeEEE Q lcl|Aclame:pro 184 LDAEGKT-ES-----------AP-----------SSAGTCT-NNLFTN---GGANTIAWSASSGASRYNVYKEQGGLYGY 236 (681) Q Consensus 184 ~~~~g~~-~s-----------~~-----------s~~~t~~-~~~~~~---~~~~~~~w~a~~~~~~~~v~~~~~~~~~~ 236 (681) .+..... .. ++ ....+.. +.++.. ...+...|.++.+......+...++.+.. T Consensus 234 ~~~~~~~~~~~~~~~v~~~~~Lp~~~~~g~~~~i~~~~~~~~~~y~~~~~~~~~~~~~w~e~~~~~~~~~~~~~tmp~~l 313 (800) T protein:vir:10 234 TDGAKGKDLVAIKNKVSSTDLLPSRAPAGYKVQVWPTGSKPESRYWLQAEPKEGNLVSWKETIAADVLLGFDKGTMPYII 313 (800) T ss_pred eecCCcceEEEEEeeccceeeccccCCCCceEEEEcCCCCCCceeEEEEEeccccceEEEeecccCceeeeecccccEEE Confidence 0000000 00 00 0001111 112211 22355678888887777777777787777 Q ss_pred eecc----ceeEEEeccccccccccccccccCccccC----CceeEEEEEcCeEEEEecCCCccEEEEEeccChhccccc Q lcl|Aclame:pro 237 IGQT----TGTSLVDDNIAPDLSVTPPIYDAVFNAAG----DYPAAVSYFEQRRCFAGTTNKPQNIWMTRSGTESAMSYS 308 (681) Q Consensus 237 ~~~~----~~t~~~~~~~~~~~~~~~~~~~~~~s~~~----g~p~~v~f~~~RL~~~~~~~~p~~v~~S~~gd~~nF~~~ 308 (681) +... .++.......|.++.++++.++|.++|.+ +||++|+||||||+|++ ||+|||||+||||||+++ T Consensus 314 v~~~~~~~~~~~~~~~~~w~~r~~gd~~tnp~psf~~~~~~~~i~~v~f~q~RL~f~~----~~~v~~Srtgd~~nF~~~ 389 (800) T protein:vir:10 314 ERTGIIDGIAQFKIRQGDWEDRKVGDDLTNPMPSFIDEEVPQTIGGMFMVQNRLCFTA----GEAVIASRTSYFFDFFRY 389 (800) T ss_pred EEeeeeecceeEEEEeccccccccCCCCCCCCchhcCCCCCCCceeEEEEeeeEEEee----CCeEEEEccCCccccccc Confidence 6655 45566666778889999999999999876 58999999999999995 799999999999999997 Q ss_pred C--CCcCCccEEEEEcCCCceEEEEEeecC-cEEEEecCcEEEEecCCCcccccceeEEEEeeccCC-cccccEEeCCeE Q lcl|Aclame:pro 309 L--PVRDDDRVAFRVAAREANAIRHIVPLT-ELLLLTSSGEWRVASVNSDAVTPTTISVRPQSYVGA-TDVQPVVVNNTT 384 (681) Q Consensus 309 ~--~~~D~D~i~~~~~~~~~~~i~~~~~~~-~Llv~t~~~e~~~~~~~~~~ltP~~~~~~~~s~~g~-~~~~Pv~vg~~v 384 (681) + +++|||||+++++++|+++|+|+++++ +|+|||+++||+|++ +++|||+|++++++|+|++ +.|+|+.+|+++ T Consensus 390 t~~~~~DdD~I~~~~ss~~~~~i~~~v~~~~~L~l~T~g~q~~l~g--~~~lTP~~~~i~~~s~~~~~~~~~Pv~vG~~v 467 (800) T protein:vir:10 390 TVISALATDPFDIFSDASEVYQLKHAVTLDGATVLFSDKSQFILPG--DKPLEKSNALLKPVTTFEVNNKVKPVVTGESV 467 (800) T ss_pred cccCCCCCccEEEEEcCCcceeeeeEeecCCcEEEEecCcEEEEeC--CCcccceeEEEEEEEeeeccCCCCceEeCCeE Confidence 5 678999999999999999999999996 799999999999987 4599999999999999966 579999999999 Q ss_pred EEEEcCCC--EEEEEEEeeeccceeccchhhhhHHhcCCCCEEEEEEecCCCEEE-EEEcCCCeEEEEEEe---cccceE Q lcl|Aclame:pro 385 IYGAARGG--HVRELAYNWQANGFVTGDLSLRAAHLFDNLDILDMAYAKAPQPIV-WFISSSGKLLGLTYV---PEQQIG 458 (681) Q Consensus 385 ~fv~~~g~--~vre~~~~~~~~~~~~~dlt~~~~hl~~~~~~~~~~~~~~p~~~~-~~~~~dg~l~~~ty~---~~q~v~ 458 (681) +|+|++|+ +||||+|++++|+|+++|||+|++||+++ ++.+++++++|+.++ |+..++++|++|+|+ +||+|+ T Consensus 468 ~Fv~~~g~~s~vre~~~~~~~d~~~a~DlT~~~~hl~~~-~v~~~~~~~~~~~~v~~~~~~~~~l~~~~yl~~~~e~~~~ 546 (800) T protein:vir:10 468 MFATNDGSYSGVREFYTDSYSDTKKAQAITSHVNKLIEG-NITNMAASTNVNRLLVTTDKYRNIIYCYDWLWQGTDRVQS 546 (800) T ss_pred EEecCCCCeeEEEEEeeeecccceehhhHHhHHHHhcCC-ceEEEEEeCCCCeEEEEEEcCCCeEEEEEEeecCCceEEE Confidence 99999995 69999999999999999999999999997 788999998877766 666688999999997 788899 Q ss_pred EEEEeccC-CceEEEEEEeeCCCCEEEEEEEECCCCceEEEEeeccCcc--ccccccceEeecceeeccC-------cce Q lcl|Aclame:pro 459 AWHQHDTD-GVFESCAVVAEGNEDRLYAVVRRTIGGNEVRYVERMASRQ--FDAQADAFFVDSGLTYSGE-------PVS 528 (681) Q Consensus 459 aW~~w~~~-g~~~~v~~~~~~~~d~l~~~v~r~~~g~~~~~ie~~~~~~--~~~~~~~~~lD~~~~y~~~-------~~~ 528 (681) |||||+++ |.+..+|.+ .+|.||++|+|+.+ +|||||+... .....+++||||+.++.+. ..+ T Consensus 547 aW~~w~~~~~~~~~~~~~---~~d~l~~iv~r~~~----~~ier~~~~~~~~~~~~~~~~lD~~~~~~~~~~~~~~~~~~ 619 (800) T protein:vir:10 547 AWHVWEWPMGTKVRGMFY---SGELLYLLLERGDG----VYLEKMDMGDALTYGLNDRIRMDRQAELIFKHFKAEDEWIS 619 (800) T ss_pred EEEEEEcCCCcEEEEEEE---eCCeEEEEEECCCc----EEEEEEecccCccccccceeeeecceeecccccccCcceEE Confidence 99999975 334333333 27899999999864 9999997643 3345668999988764432 111 Q ss_pred eeccCCccCCc--------EEEEEeCCeeeccEeecCCEEEeC-------CCCCeEEEeeecceeEEecceEecCCCccc Q lcl|Aclame:pro 529 HISGLEHLEGK--------TVSILADGAVHPQRVVTDGAIDLD-------VEAGTVHIGLPITAELQTLPVAMQLDGSFG 593 (681) Q Consensus 529 ~~~gl~~l~G~--------~v~v~adG~~~~~~~v~~g~i~l~-------~~~~~v~vG~~y~~~v~~~p~~~~~~~~~~ 593 (681) ...++.+++++ ...++++|.+.....+.++.++++ .++.+|+|||+|+++++++||+++.+++.. T Consensus 620 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~~~~~~~~g~~~~~~~~~~g~~~~~~v~VGl~Y~s~~~~~~~~i~~~~g~~ 699 (800) T protein:vir:10 620 EPLPWTPTNPELLDCILIEGWDSYIGGSFLFKYKPSDNTLSTTFDMHDDNHVKAKVIVGQIYPQEFEPTPVVIRDRQDRV 699 (800) T ss_pred EeccccccCCcceEEeeeccceeecCceeEEEEEecCCceEeeeeecCCCcccceEEEeeeeeEEEeecceEEEcCCCcc Confidence 22334444444 445556788888888889988873 567899999999999999999998777765 Q ss_pred cc-ceeEEEEEEEEEeccccEEEecCCCeeEE--eeeeccc------ccCCcCCcccceEEEEecCCcCcceEEEEEECC Q lcl|Aclame:pro 594 QG-RVKNINKLWLRVHRSSGIFAGPHADALTE--VKQRTSE------PYGSPPALKSEEIPLVLSPKWGDSGQLFVRQAD 664 (681) Q Consensus 594 ~~-~~~~i~rv~l~~~~S~~~~v~~~~~~~~~--~~~~~~~------~~~~~~~~~tG~~~v~~~~~~~~~~~v~I~~~~ 664 (681) ++ .++||+|++|++.+|+++.++++.....+ ....... ...+.++++||+++||+. +|+++.+|+|+|++ T Consensus 700 ~~~~r~~i~r~~~~~~~sg~~~~~v~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~tg~~~vp~~-g~~~~~~v~i~~d~ 778 (800) T protein:vir:10 700 SYIDVPVVGLVHLNLDMYPDFSVEVKNVKSGKVRRVLASNRIGGALNNTVGYVEPREGVFRFPLR-AKSTDAVYRIIVES 778 (800) T ss_pred cccCCeEEEEEEEEeecCceEEEEeccCcccceeEEccCCeeccccccccCcccccCceEEEEEe-ccCceeEEEEEECC Confidence 54 57899999999999999999876654322 2222222 222345789999999985 68999999999999 Q ss_pred ccCEEEEEEEEEEEEcC Q lcl|Aclame:pro 665 PLPLMIVSMSAEIAIGA 681 (681) Q Consensus 665 P~P~tvlai~~ev~vg~ 681 (681) |+||+|+||+||....= T Consensus 779 P~P~tvlai~~eg~y~~ 795 (800) T protein:vir:10 779 PHTFQLRDIEWEGSYNP 795 (800) T ss_pred CCcEEEEEEEEEEEeec Confidence 99999999999999988 No 23 >protein:vir:78703 Length: 905 # NCBI annotation: tail tube B # Family: family:all:825 # MgeID: mge:1856 # MgeName: Syn5 # Cross-refs: genbank:acc:YP_001285450;genbank:gi:148724484;genbank:GeneID:5220174 Probab=100.00 E-value=9.7e-134 Score=749.80 Aligned_cols=660 Identities=15% Similarity=0.171 Sum_probs=493.3 Q ss_pred CCcceEeecccccccccchhcccchHHHHHHHHhhhhccEEeeccCeeeCCchheeeecCCC-cCceEEEEEEeCCCCeE Q lcl|Aclame:pro 1 MSNVRVLQRSFGGGEISPEMFGRIDDVKYQSGLAICRNFVVKPQGPAENRAGFAFVREVKDS-AKKVRLIPFTYSVTQTM 79 (681) Q Consensus 1 M~~~~~~q~~f~~GElsP~l~~R~D~~~y~~~~~~~~N~~~~~~Gg~~rRpG~~~v~~~~~~-~~~~rlipf~~~~~~~y 79 (681) ||.+....+||.+| ++++.|..|+..+++.|.||++.|..|++||||+.||+.+.+. ....+.+.+.+++.+.| T Consensus 1 M~~v~~si~nl~~G-----vSqQp~~~r~pgQ~~~q~N~~~d~v~Gl~kRp~~~~i~~l~~~~~~~~~~~~~~r~~~e~y 75 (905) T protein:vir:78 1 MGAVLQKIPNLLGG-----VSQQPDPVKLPGQVREAENVYLDPTFGCRKRPATKFVGELATNLPSDTRWFPIFRDAGERY 75 (905) T ss_pred CccceecchhhhCc-----eeecchhhcCCcchhhhhccccccccccccCchhhhhhhhcCCCCCCceEEEEEeCCCceE Confidence 99999999999999 8999999999999999999999999999999999999988765 35578889999999999 Q ss_pred EEEEcC-C----EEEEEeC-Cc--EEeeC-CEEEEEeCCCCchhhceeeEEEeccEEEEEcCCcceEEEE--ECCCCcEE Q lcl|Aclame:pro 80 VIELGA-G----YFRFHTN-GG--TLLDG-AVPYEIANPYAEADLFNIHYVQSADVLTLVHPNYAPRELR--RLGATNWQ 148 (681) Q Consensus 80 ~lefg~-~----~irv~~~-~~--~v~~~-~~~~~i~TPy~~a~l~~l~~~qsaD~l~lvh~~~~p~~l~--R~~~~~W~ 148 (681) ++.+.. + .||||.- .| ..++. +. .++..++....+|+++..+|.+||++++..|+.-. ......|- T Consensus 76 ~~~~~~~g~~~~~i~v~d~~~G~~~~V~~~~~---~~~yl~~~~~~~l~~~tv~d~tfi~N~~~~~~~~~~~~~~~~~~~ 152 (905) T protein:vir:78 76 AVALYKDGSGNTQVRVWDMQTGAERTVTPDAT---ATAYLATTNLNNLNWLTVADYTLLSNKERIVTMSGASEVDSNQRA 152 (905) T ss_pred EEEEeeCCCCCcceEEEEccCCcEEEEecCCC---ccceeecCCCcceEEEEEcCEEEEEcCceeeeecCCCCcCCCCeE Confidence 999852 2 4999965 23 22221 21 12223445567899999999999999999885211 11112221 Q ss_pred EEEE-----------eeccCcc-------cccc----------------------------------------------- Q lcl|Aclame:pro 149 LATI-----------AFTSPVA-------TPTS----------------------------------------------- 163 (681) Q Consensus 149 ~~~~-----------~f~~~~~-------~~~~----------------------------------------------- 163 (681) +..+ .+..... .+.+ T Consensus 153 ~~~v~~g~y~r~y~v~I~~~~~~~~~t~~~~~a~~~s~~s~~~~~~g~~~~~~~~~~~~~t~~~~~~l~f~~~~~~~~~~ 232 (905) T protein:vir:78 153 LVEINAISYNTTYSIDLDRDGASQQVKVYRAKALEISPGSFEVEDGGVCTEHDVQNYTNQTIGSSTGLAFQVRVQCAAYL 232 (905) T ss_pred EEEEEeeccceeEEEEEeCCCCceeeeeeccccceeccccccccccccccccceeeeecceeeccCCceeEEeecccccc Confidence 1110 0000000 0000 Q ss_pred ----------cceeeecC--c-----------ceeeEEEEEEE----E--------------Eec--------------- Q lcl|Aclame:pro 164 ----------VTATSNNK--G-----------TDYTYRYVVTA----L--------------DAE--------------- 187 (681) Q Consensus 164 ----------~t~t~~~~--~-----------~~~t~~~~v~a----~--------------~~~--------------- 187 (681) .+.+-..+ + ...++...+.. . +.. T Consensus 233 ~~~~~~~~~~~~~~l~~g~~~~~~~~~~~v~~~g~~y~i~i~~~~~~~~~~~~~~~~~~t~~d~~a~~~~~~~i~~~l~~ 312 (905) T protein:vir:78 233 ENNEYRSRYNVSVVLQNGGTGFRKGDMITVNLNGRDYNIRVTQEEFVYTYASDGTAAHTTPQDSTAGTLDIGQITAGLVN 312 (905) T ss_pred CCCcccccccceeeeeccccccccCccEEEeeccceEEEEEecceeEEEecCCCcccccCccCccCccccHHHHHHHHHH Confidence 00000000 0 00000000000 0 000 Q ss_pred -------------cceE-----------------------E-----------------------ecCcccceecccee-- Q lcl|Aclame:pro 188 -------------GKTE-----------------------S-----------------------APSSAGTCTNNLFT-- 206 (681) Q Consensus 188 -------------g~~~-----------------------s-----------------------~~s~~~t~~~~~~~-- 206 (681) +... + .........+++|+ T Consensus 313 ~~~~~~~~~~~~~g~~i~v~~~~~~~~~~~~~~g~~~~~~~~~~~~v~~~~~Lp~~~~~g~~v~v~~~~~~~~d~yyv~~ 392 (905) T protein:vir:78 313 SVNLISNYSAQAVGNVIEIERTDGRDFNLGVRGGATNRAMTAIKGTANSIVDLPGQCFDGFELKVINTENAESDDYYVVF 392 (905) T ss_pred hhcccccEEEEecCcEEEEEecCCCccEEEEeccCCcceEEEEeccccccccCccccCCCcEEEEEeCCCCCcceEEEEE Confidence 0000 0 00000000111221 Q ss_pred ----ccceeeeEEeeccCCceeeeecccceeEEEeeccceeEEEeccc-------cccccccccccccCccccCCceeEE Q lcl|Aclame:pro 207 ----NGGANTIAWSASSGASRYNVYKEQGGLYGYIGQTTGTSLVDDNI-------APDLSVTPPIYDAVFNAAGDYPAAV 275 (681) Q Consensus 207 ----~~~~~~~~w~a~~~~~~~~v~~~~~~~~~~~~~~~~t~~~~~~~-------~~~~~~~~~~~~~~~s~~~g~p~~v 275 (681) .+..++.+|.++.++....-+...++.|.++....+.+.+.... |.++.++++.++|.|+|.+++|++| T Consensus 393 ~~~~~~~~~~~~W~E~~~~~~~~~~~~~tmp~~l~r~~~g~f~~~~~~~~~~~~~~~~r~~Gd~~Tnp~psf~g~~is~v 472 (905) T protein:vir:78 393 RSAAEGIPGSGSWEETVAPGIERGFNTSTMPHALIRQADGNFTLEALNDEGTITGWAQREVGDDDTNPKPSFVGRGISDM 472 (905) T ss_pred EecccCCcCceeEEEecccccccccccccccEEEEEecCceEEEEEeccccccccccccccCCcccCCCCcccCCCcceE Confidence 11123446766666655555556667777777666665544433 6778889999999999999999999 Q ss_pred EEEcCeEEEEecCCCccEEEEEeccChhcccccC--CCcCCccEEEEEcCCCceEEEEEeecC-cEEEEecCcEEEEecC Q lcl|Aclame:pro 276 SYFEQRRCFAGTTNKPQNIWMTRSGTESAMSYSL--PVRDDDRVAFRVAAREANAIRHIVPLT-ELLLLTSSGEWRVASV 352 (681) Q Consensus 276 ~f~~~RL~~~~~~~~p~~v~~S~~gd~~nF~~~~--~~~D~D~i~~~~~~~~~~~i~~~~~~~-~Llv~t~~~e~~~~~~ 352 (681) +||||||+|++ ||+|||||+||||||++++ ++.|||||+++++++++++|+|+++++ +|+|||+++||+|+++ T Consensus 473 ~f~q~RL~f~s----~~~v~~Srtgd~~nF~~~t~~~~~DdDpI~~~~ss~~~~~i~~~v~~~~~L~ifT~g~ef~lsg~ 548 (905) T protein:vir:78 473 FFYNNRLGFLS----EDAVIMSQPGDYFNFFVTSAITISDSDPIDVTASSTKPAILRAAIGAPKGLILFAENSQFLLASQ 548 (905) T ss_pred EEEcceEEEec----CCeEEEEccCCccccccccccCCCCCccEEEEEcCCcceeeEEEeecCCcEEEEecCceEEEecC Confidence 99999999995 7899999999999999975 467999999999999999999999985 7999999999999975 Q ss_pred CCcccccceeEEEEeeccCCc-ccccEEeCCeEEEEEcCCC--EEEEEEEeeeccceeccchhhhhHHhcCCCCEEEEEE Q lcl|Aclame:pro 353 NSDAVTPTTISVRPQSYVGAT-DVQPVVVNNTTIYGAARGG--HVRELAYNWQANGFVTGDLSLRAAHLFDNLDILDMAY 429 (681) Q Consensus 353 ~~~~ltP~~~~~~~~s~~g~~-~~~Pv~vg~~v~fv~~~g~--~vre~~~~~~~~~~~~~dlt~~~~hl~~~~~~~~~~~ 429 (681) +++|||+|++++++|.|+++ .|+|+.+|++++|++++|+ +||||+|++++|+|+++|+|+|++||+++. +.+++ T Consensus 549 -~~~lTP~s~~i~~~S~~~~~~~v~Pv~vG~~vlFv~~~g~~s~vre~~y~~~~d~y~a~DlT~~a~hl~~g~--v~~~~ 625 (905) T protein:vir:78 549 -EVVFSTATIKLTEISDYFYRSLAKPVSTGVSIAFVSEADTYSKIFEMSIDSVDNRPQVADITRIVPEYVPTG--LTWSV 625 (905) T ss_pred -CccccceeEEEEeEEeecccCCCCcEEeCCeEEEeecCCCeeEEEEEEeeecccceehhHHHHHHHHhcCCc--eEEEE Confidence 45899999999999999975 6999999999999999985 599999999999999999999999999973 45677 Q ss_pred ecCCCEEEEEEcCCCeEEEEEEe---cccceEEEEEeccCCceEEEEEEeeCCCCEEEEEEEECCCCceEEEEeeccCcc Q lcl|Aclame:pro 430 AKAPQPIVWFISSSGKLLGLTYV---PEQQIGAWHQHDTDGVFESCAVVAEGNEDRLYAVVRRTIGGNEVRYVERMASRQ 506 (681) Q Consensus 430 ~~~p~~~~~~~~~dg~l~~~ty~---~~q~v~aW~~w~~~g~~~~v~~~~~~~~d~l~~~v~r~~~g~~~~~ie~~~~~~ 506 (681) +++|.+++|++++||+|++|+|+ +||+|+|||||+|+|.++++|.+ .|.+|++++|..+|+.++|+|+|.... T Consensus 626 ~s~~~~~v~~~~~~~~l~~ytyl~~~~eq~v~AWsrw~~~G~~~~~a~i----~d~~~~vV~r~~~G~~~~~~~~l~~~~ 701 (905) T protein:vir:78 626 STPNNSMMLFGDNSNTAYIFKFFNQGNERQVAGWSKWILPGEQRMCGFF----ADTGYFVLYDSTTGSYVLSAMELLDDP 701 (905) T ss_pred ecCCCcEEEEEcCCCeEEEEEeecCCCceeEEeEEEEecCCCeEEEEEE----cCCEEEEEEEccCCeEEEEEEeecccc Confidence 88999999999999999999996 78889999999999999999988 467999999999999999999985432 Q ss_pred cc-----------ccccceEeecceeeccCcc-----eeeccCCccCCcEEEEEeCCeeeccE---eecCCEEEeCCCCC Q lcl|Aclame:pro 507 FD-----------AQADAFFVDSGLTYSGEPV-----SHISGLEHLEGKTVSILADGAVHPQR---VVTDGAIDLDVEAG 567 (681) Q Consensus 507 ~~-----------~~~~~~~lD~~~~y~~~~~-----~~~~gl~~l~G~~v~v~adG~~~~~~---~v~~g~i~l~~~~~ 567 (681) .. ...+.+.+|++.+|..... ...+++.|++|+.+.+.+||...+.+ .+.++.+++ ..+. T Consensus 702 ~~~~~d~~~~~~~~~~d~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~~~~~~~~~~~~~t~-~~a~ 780 (905) T protein:vir:78 702 DSASIDTAFSSFLPRLDNYVVKSDLTVVDNGDGTLTVDLEAGQAMTGATPVIMFTDGPSEFAFSQPTITAGQFTV-DTTD 780 (905) T ss_pred CccccccceeeeeeccceeeecccceecccCcceEeeeccCccccccceeEEEeeCCceeeeEEEEEeeceeecc-ccCC Confidence 11 1233444555555532211 12245667777877788899775533 344555544 4678 Q ss_pred eEEEeeecceeEEecceEecCCCcccccceeEEEEEEEEEeccccEEEecCCCeeEEeeee------cccccCCcCCccc Q lcl|Aclame:pro 568 TVHIGLPITAELQTLPVAMQLDGSFGQGRVKNINKLWLRVHRSSGIFAGPHADALTEVKQR------TSEPYGSPPALKS 641 (681) Q Consensus 568 ~v~vG~~y~~~v~~~p~~~~~~~~~~~~~~~~i~rv~l~~~~S~~~~v~~~~~~~~~~~~~------~~~~~~~~~~~~t 641 (681) +|+|||+|+++++++|++++.++++.+++++||+|++||+++|++++++++....+.+... .....+.+|++++ T Consensus 781 ~v~VGl~Y~s~v~~~p~~~~~~~~s~~~~~~rI~rv~lr~~~Sg~~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~p~~~t 860 (905) T protein:vir:78 781 DFVVGFKYETKITLPGFFTSEENKADRVYAPIVEFLYLDLYYSGRYQIEVDRIGYDTINIDAGSIDANIYLADGAPLKEI 860 (905) T ss_pred eEEEeeeeeEEEeecceEeccCCCcccccceEEEEEEEEeecceeEEEEEcCCCcceecccccceecCcccCcccccccc Confidence 8999999999999999999999999999999999999999999999998777655544221 2234567778899 Q ss_pred ceEEEEecCCcCcceEEEEEECCccCEEEEEEEEEEEEcC Q lcl|Aclame:pro 642 EEIPLVLSPKWGDSGQLFVRQADPLPLMIVSMSAEIAIGA 681 (681) Q Consensus 642 G~~~v~~~~~~~~~~~v~I~~~~P~P~tvlai~~ev~vg~ 681 (681) |.++||+. +|+++.+|+|+|+.|+||+|+||+||....= T Consensus 861 g~~~vP~~-g~~~~~~v~I~sd~PlP~tvlsi~weg~Yn~ 899 (905) T protein:vir:78 861 ATENVPLF-TPGDQVTVTIKAPDPFPSAITGYSWQGHYNR 899 (905) T ss_pred cEEEEEee-ccCceeEEEEEECCCCcEEEEEEEEEEEecc Confidence 99999985 6899999999999999999999999999888 No 24 >protein:vir:100022 Length: 976 # NCBI annotation: T7-like tail tubular protein B # Family: family:all:825 # MgeID: mge:1604 # MgeName: P-SSP7 # Cross-refs: genbank:acc:YP_214208;genbank:gi:61806431;genbank:GeneID:3294702 Probab=100.00 E-value=5e-129 Score=723.95 Aligned_cols=665 Identities=14% Similarity=0.169 Sum_probs=481.6 Q ss_pred CCcceEeecccccccccchhcccchHHHHHHHHhhhhccEEeeccCeeeCCchheeeecCCCcC-------ceEEEEEEe Q lcl|Aclame:pro 1 MSNVRVLQRSFGGGEISPEMFGRIDDVKYQSGLAICRNFVVKPQGPAENRAGFAFVREVKDSAK-------KVRLIPFTY 73 (681) Q Consensus 1 M~~~~~~q~~f~~GElsP~l~~R~D~~~y~~~~~~~~N~~~~~~Gg~~rRpG~~~v~~~~~~~~-------~~rlipf~~ 73 (681) ||.+....+||.+| ++++.|..|+..+++.|.||++.|..|++||||+.||+.+.+... ...++...+ T Consensus 1 M~~v~~si~nl~~G-----vSqQp~~~r~pgQ~~~q~N~~~d~v~Gl~kRp~~~~v~~l~~~~~~~~~~~~~~~~~~~~r 75 (976) T protein:vir:10 1 MASVTQTIPTLTGG-----LSQQPDELKIPGQVSVANNVIPDVTHGLLKRPGGKLVASISDNGTAALNSQTNGKWFSYYR 75 (976) T ss_pred CcceeecchhhhCc-----ceecchhhcCCchhhhhhccccccccccccCCcceeeeeecCCCcccccccccceEEEEEc Confidence 99999999999999 899999999999999999999999999999999999999876532 245578889 Q ss_pred CCCCeEEEEEc-CCEEEEEeC-CcEEe--e--CCEEEEEeCCCCchhhceeeEEEeccEEEEEcCCcceEEEE------- Q lcl|Aclame:pro 74 SVTQTMVIELG-AGYFRFHTN-GGTLL--D--GAVPYEIANPYAEADLFNIHYVQSADVLTLVHPNYAPRELR------- 140 (681) Q Consensus 74 ~~~~~y~lefg-~~~irv~~~-~~~v~--~--~~~~~~i~TPy~~a~l~~l~~~qsaD~l~lvh~~~~p~~l~------- 140 (681) ++.+.|++.+. +|.|+||+. .|... + ++.-.-+.+.-++..-.+|+++-.+|.+||++++..|+.=. T Consensus 76 ~~~e~y~~~~~~~g~~~v~~~~~G~~~~v~~~~~~~~~~~~yl~~~~~~~~~~~tv~d~tfi~N~~~~~~~~~~~~~~~~ 155 (976) T protein:vir:10 76 DETESYIGQVSRSGDINMWRCSDGQAMTVNYDSGTATALTTYLTHTNDEDIQTLTLNDYTFLTNRTKTVAMSSTVEPVRP 155 (976) T ss_pred CCCcEEEEEEecCCceEEEEccCCeEEEEEcCCCcccccchhhccCCcceeEEEEEccEEEEecCceEEeecccccCCCC Confidence 99999998887 668999965 23221 1 11111122212345567899999999999999998874210 Q ss_pred -------ECC--CCcEEEEE--------E--------------------------------------------------- Q lcl|Aclame:pro 141 -------RLG--ATNWQLAT--------I--------------------------------------------------- 152 (681) Q Consensus 141 -------R~~--~~~W~~~~--------~--------------------------------------------------- 152 (681) |.+ ...|++.- + T Consensus 156 ~~~~~~v~~~~y~~~y~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~s~~~G~~~~~~~ 235 (976) T protein:vir:10 156 PEVFIDLKATAYARQYAVNLFDNTTTTAVSTVTRIDVELIKSSNNYCDSNGAMVARTSRPSNSTRCDDSAGDGRDAYAPN 235 (976) T ss_pred ceEEEEeeeeccceEEEEEEcCCcccceeeeeeeeeeccccCCcccccccccchhhHhHhhhhhcccccccccccccCce Confidence 000 01122110 0 Q ss_pred ----eeccCc--c---cccc--cce----------------------------------eeecCcceeeEEEE------- Q lcl|Aclame:pro 153 ----AFTSPV--A---TPTS--VTA----------------------------------TSNNKGTDYTYRYV------- 180 (681) Q Consensus 153 ----~f~~~~--~---~~~~--~t~----------------------------------t~~~~~~~~t~~~~------- 180 (681) .|.... . .+.+ ... +.......|+..+. T Consensus 236 v~~~~f~~~~G~~~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~Y~~~y~~~~~v~~ 315 (976) T protein:vir:10 236 VGTKVFNVTDGASLTDEANSGSYTYTIDVKDSSNNSVNRGVNLYFRIRTVGQSVPFTTGSGSSATTTYQARYTTTFDLLY 315 (976) T ss_pred eeeeEEEeccCccceEcCCcceEEEEeeccccceEEeecCCceEEEEccccceeecccccccceeeeeeEEEEeEEEEec Confidence 000000 0 0000 000 00000000000000 Q ss_pred ------------EE-------------------EEEe-----------c------------------------------c Q lcl|Aclame:pro 181 ------------VT-------------------ALDA-----------E------------------------------G 188 (681) Q Consensus 181 ------------v~-------------------a~~~-----------~------------------------------g 188 (681) +. +.+. . + T Consensus 316 ~~~g~~~~~~~~V~v~g~~Y~it~~~~~~~~~~a~~~~~~~~~t~~d~~~~~~~~~ia~~L~~~l~a~~~~~g~tv~~~g 395 (976) T protein:vir:10 316 GGTGWQEGDYFYVWMKDGYYKITVEAISTANVQANLGLIRPNPTPFDTETAVTAESIIGDIRTAIIATGNFTSANVQQIG 395 (976) T ss_pred CCCCcccCceEEEEccccceeeEEEEeeceeEEeccccccCcCCcCcccccccHHHHHHHHHHhhcccccccceEEEEcC Confidence 00 0000 0 0 Q ss_pred ceEEecCcccc----e-------------------------------------eccceec-----cceeeeEEeeccCCc Q lcl|Aclame:pro 189 KTESAPSSAGT----C-------------------------------------TNNLFTN-----GGANTIAWSASSGAS 222 (681) Q Consensus 189 ~~~s~~s~~~t----~-------------------------------------~~~~~~~-----~~~~~~~w~a~~~~~ 222 (681) .......++++ . .+++|.. +..+..+|.++.+.. T Consensus 396 ~~~~i~~~~~~~~~s~~~~~~~~~~~~~V~~~~~LP~~~~~g~~v~V~~~~~~~d~yyv~~~~~~~~~~~~~w~E~~~~g 475 (976) T protein:vir:10 396 TGLYVTRPSGTFNVTAPSSDLLRVMSGEVANVDDLPSQCKHGYVVKVANSEADADDYYVKFFGHNNRDGDGVWEECAKPS 475 (976) T ss_pred cEEEEEecCcceEecCCCceeEEEEEeeecchhhhhhhccCCcEEEEecCCCCceeEEEEeeccccccccceEEEeeccc Confidence 00000000000 0 0000000 001112344444433 Q ss_pred eeeeecccceeEEEeeccceeEEEeccccccccccccccccCccccCCceeEEEEEcCeEEEEecCCCccEEEEEeccCh Q lcl|Aclame:pro 223 RYNVYKEQGGLYGYIGQTTGTSLVDDNIAPDLSVTPPIYDAVFNAAGDYPAAVSYFEQRRCFAGTTNKPQNIWMTRSGTE 302 (681) Q Consensus 223 ~~~v~~~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~s~~~g~p~~v~f~~~RL~~~~~~~~p~~v~~S~~gd~ 302 (681) ...-+...++.+.++..+.+++.+....|.++.++++.++|.+++.+.+|++|+||||||+|++ ||+|||||+||| T Consensus 476 ~~~g~~~~tmP~~l~~~~~g~f~~~~~~w~~r~vGd~~tnp~psf~g~~is~v~f~q~RL~f~s----~~~v~~Srtgd~ 551 (976) T protein:vir:10 476 RNIEFDKGTMPIQLVRQANGTFTVSQATWQNAEVGDELTNPNPSFVGKTINQLVFFRNRLVFLS----DENVIMSRPGEF 551 (976) T ss_pred cccccccccccEEEEecccCeEEeeeccccccccCCcccCcCceecccccceEEEEcceEEEec----CCeEEEEecCCc Confidence 3333344455666777777777777777999999999999999999999999999999999995 799999999999 Q ss_pred hcccccC--CCcCCccEEEEEcCCCceEEEEEeec-CcEEEEecCcEEEEecCCCcccccceeEEEEeeccCCc-ccccE Q lcl|Aclame:pro 303 SAMSYSL--PVRDDDRVAFRVAAREANAIRHIVPL-TELLLLTSSGEWRVASVNSDAVTPTTISVRPQSYVGAT-DVQPV 378 (681) Q Consensus 303 ~nF~~~~--~~~D~D~i~~~~~~~~~~~i~~~~~~-~~Llv~t~~~e~~~~~~~~~~ltP~~~~~~~~s~~g~~-~~~Pv 378 (681) |||++++ ++.|||||+++++++++++|+|++++ ++|+|||+++||+|+++ +++|||+|++++++|+|+++ .|+|+ T Consensus 552 ~nF~~~t~~~~~DdD~I~~~~ss~~~~~i~~~v~~~~~L~l~T~g~e~~lsg~-~~~lTP~t~~i~~~s~~~~~~~v~Pv 630 (976) T protein:vir:10 552 FNFWSKTATTFTPQDVIDLSCSSTYPAIVYDGIQVNAGLLLFTKNQQFMLTTD-SDILSPETAKINAVSSYNFNEKTHPV 630 (976) T ss_pred cccccccccCCCCCccEEEEecCCcceeeEEEEecCCcEEEEecCceEEEecC-CceecceeEEEEEEEeeeccCCCccE Confidence 9999975 56799999999999999999999998 58999999999999874 46999999999999999864 69999 Q ss_pred EeCCeEEEEEcCCC--EEEEEEEeeeccceeccchhhhhHHhcCCCCEEEEEEecCCCEEEEEEcCCCeEEEEEEe---c Q lcl|Aclame:pro 379 VVNNTTIYGAARGG--HVRELAYNWQANGFVTGDLSLRAAHLFDNLDILDMAYAKAPQPIVWFISSSGKLLGLTYV---P 453 (681) Q Consensus 379 ~vg~~v~fv~~~g~--~vre~~~~~~~~~~~~~dlt~~~~hl~~~~~~~~~~~~~~p~~~~~~~~~dg~l~~~ty~---~ 453 (681) .+|++++|+|++|+ +++||.|+.++++|.+.|||.|++||+++ .+..++++++|..++|++++||+|++|+|+ + T Consensus 631 ~vG~~v~Fv~~~g~~~r~~~~~~~~~~~~~~~~dlt~~~~~l~~g-~~~~~a~~~~~~~vv~~~~~~g~l~~~ty~~~~~ 709 (976) T protein:vir:10 631 SLGTTVAFIDNANQFTRFFEMSNVVRQGEPDVVDQSKVISRLLDK-NISLVSVSRENSVVFFSQKDTDKIYCFRYFTSGE 709 (976) T ss_pred EeCCeEEEEecCCCeEEEEEEeecccccccchhHHHHHhhhhcCC-ceEEEEEcCCCcEEEEEEcCCCEEEEEEEeecCC Confidence 99999999999997 55677778788999999999999999997 788899999999999999999999999996 8 Q ss_pred ccceEEEEEeccCCceEEEEEEeeCCCCEEEEEEEECCCCceEEEEeeccCccccc------------cccceEeeccee Q lcl|Aclame:pro 454 EQQIGAWHQHDTDGVFESCAVVAEGNEDRLYAVVRRTIGGNEVRYVERMASRQFDA------------QADAFFVDSGLT 521 (681) Q Consensus 454 ~q~v~aW~~w~~~g~~~~v~~~~~~~~d~l~~~v~r~~~g~~~~~ie~~~~~~~~~------------~~~~~~lD~~~~ 521 (681) ||+|+|||||+|+|+|++||++ +|.||++|+|+++|+.+||+|++++..... .....|||+..+ T Consensus 710 eq~v~aWsr~~~~G~v~sv~~i----~D~ly~vV~r~~~g~~~r~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~lD~~~~ 785 (976) T protein:vir:10 710 KRLLQAWTTWTITGNIQYHCML----DDALYVVTRNNNKDQIVKYSLKLDDAGHFVTDTQGTTSTDDDSIYRVHLDHSSS 785 (976) T ss_pred ceeEEeeEEEecCCcEEEEEEe----CCeEEEEEEecCCeEEEEEEEEECCccceeeeccCccccccCCcceeeeccceE Confidence 8999999999999999999998 689999999999999999999997643211 111357887654 Q ss_pred e-------ccCcceeeccCCccCC---cEEEEEeCCee----eccEeecCCEEEeC--CCCCeEEEeeecceeEEecceE Q lcl|Aclame:pro 522 Y-------SGEPVSHISGLEHLEG---KTVSILADGAV----HPQRVVTDGAIDLD--VEAGTVHIGLPITAELQTLPVA 585 (681) Q Consensus 522 y-------~~~~~~~~~gl~~l~G---~~v~v~adG~~----~~~~~v~~g~i~l~--~~~~~v~vG~~y~~~v~~~p~~ 585 (681) + ++.+..+...++++.+ +.+...+||.. +...+++++.++|+ +++++|||||+|+++++|+||+ T Consensus 786 ~~~~~~t~~~~t~~t~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~v~g~~i~l~g~~~~~~v~VGl~Y~s~~~~~~~~ 865 (976) T protein:vir:10 786 VTAASNTYNTTTIKTTIPKPNGYESTKQLVAYDTDAGNDLGRYALVTVSGSNLEIPGNWSNNSFIIGYLYEMDVQLPTLY 865 (976) T ss_pred EEeccccccCCceeEEeecCccccCceeEEEEecccCcccccceeeeecCCeeEecCCCCCCeEEEeeeeEEEEeeccee Confidence 4 4444444444555544 44444556543 23456889999986 5688999999999999999999 Q ss_pred ecCCCcccc----cceeEEEEEEEEEeccccEEEecCCCeeEEee-----eecccccCCcCCcccce-EEEEecCCcCcc Q lcl|Aclame:pro 586 MQLDGSFGQ----GRVKNINKLWLRVHRSSGIFAGPHADALTEVK-----QRTSEPYGSPPALKSEE-IPLVLSPKWGDS 655 (681) Q Consensus 586 ~~~~~~~~~----~~~~~i~rv~l~~~~S~~~~v~~~~~~~~~~~-----~~~~~~~~~~~~~~tG~-~~v~~~~~~~~~ 655 (681) ++.+++..+ ..|++|+|+++++.+|+++++.++.....++. .+.+...+..+|+.++. +.+|+ .+|+++ T Consensus 866 i~~~~g~~~~~~~~gRl~i~r~~~~~~~tg~~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~~~~vP~-~~~~~~ 944 (976) T protein:vir:10 866 VTQQVGDKYRSDAKSSLIVHRIKFSFGPLGVYSTTIQRDGKPDFTETKELGLAGVVGASRLPIVPEVIETVPC-YERNTN 944 (976) T ss_pred EEeCCCCcccccceeeEEEEEEEEEeecccceEEEEcCCCCccccccccccccCcccccccceecCcEEEEEe-ccCCce Confidence 987665433 24678999999999999998877654333221 11234445567777766 55665 578999 Q ss_pred eEEEEEECCccCEEEEEEEEEEEEcC Q lcl|Aclame:pro 656 GQLFVRQADPLPLMIVSMSAEIAIGA 681 (681) Q Consensus 656 ~~v~I~~~~P~P~tvlai~~ev~vg~ 681 (681) .+|+|+|+.|+||+||+|+||....= T Consensus 945 ~~v~i~~d~PlP~tilsi~~eg~yn~ 970 (976) T protein:vir:10 945 LKVNVKSEHPAPATLYSLAWEGDFTN 970 (976) T ss_pred eEEEEEECCCCceEEEEEEEEEEecc Confidence 99999999999999999999999977 No 25 >protein:vir:1778 Length: 680 # NCBI annotation: tail protein A # Family: family:all:825 # MgeID: mge:38 # MgeName: P60 # Cross-refs: genbank:acc:NP_570344;genbank:gi:18640503;genbank:GeneID:932716 Probab=100.00 E-value=6.3e-93 Score=526.07 Aligned_cols=459 Identities=15% Similarity=0.178 Sum_probs=333.0 Q ss_pred CCcceEeecccccccccchhcccchHHHHHHHHhhhhccEEeeccCeeeCCchheeeecCCCcCceEEEEEEeCCCCeEE Q lcl|Aclame:pro 1 MSNVRVLQRSFGGGEISPEMFGRIDDVKYQSGLAICRNFVVKPQGPAENRAGFAFVREVKDSAKKVRLIPFTYSVTQTMV 80 (681) Q Consensus 1 M~~~~~~q~~f~~GElsP~l~~R~D~~~y~~~~~~~~N~~~~~~Gg~~rRpG~~~v~~~~~~~~~~rlipf~~~~~~~y~ 80 (681) ||.+....+||.+| ++++.|..|+..+|+.|+||++.|..|++||||+.||+.+.+......++.+.+++.+.|+ T Consensus 1 M~~v~~si~nl~~G-----vSqQp~~~r~pgQ~~~q~N~~~d~v~Gl~kRpg~~~i~~l~~~~~~~~~~~~~rd~~e~~~ 75 (680) T protein:vir:17 1 MAAVEQMVPNLLGG-----ISQQPDPLKLPGQVKQARNVQLDPTFGALKRPGTELIMQVTGIPKRAKWIPIMRDAREHYY 75 (680) T ss_pred CccceecchhhhCc-----ceecchhhcCcchhhhhhccccCcCcccccCccceeeeeccCCCCCceeEEEecCCCCeEE Confidence 99999999999999 8999999999999999999999999999999999999998776667788888999888888 Q ss_pred EEEcCC--------EEEEEeCC-c--EEee--CCEEEEEeCCCCchhhceeeEEEeccEEEEEcCCcceEEEEECC---- Q lcl|Aclame:pro 81 IELGAG--------YFRFHTNG-G--TLLD--GAVPYEIANPYAEADLFNIHYVQSADVLTLVHPNYAPRELRRLG---- 143 (681) Q Consensus 81 lefg~~--------~irv~~~~-~--~v~~--~~~~~~i~TPy~~a~l~~l~~~qsaD~l~lvh~~~~p~~l~R~~---- 143 (681) +.+... .||||+-. | ..++ ++.++. .-|-++..-.+||+.-.+|..||+++++.|+.-.... T Consensus 76 ~~~~~~g~~~~~~~~i~v~d~~~G~~~~v~~~~~~~~~-~~~~~~~~~~~lr~~tv~d~tfi~N~~v~~~~~~~~~~~~~ 154 (680) T protein:vir:17 76 VAIYREGANESGDLRIRVFDLKAGVERAVSFVGGEVEE-YFPGDETDWEAIRSLTIGDYTFLSNPNVQPTTWSRSFSRRP 154 (680) T ss_pred EEEEcCCCcccccceeEEEEccCCeEEEEEcCCCceEE-EeecCCCCccceEEEEEcCEEEEECCeEEEeccCCCCCCCC Confidence 877543 39999742 2 1122 122222 2233444556899999999999999988664211000 Q ss_pred --------------------------------------------------------CCcEEEEEEeeccC---cc----c Q lcl|Aclame:pro 144 --------------------------------------------------------ATNWQLATIAFTSP---VA----T 160 (681) Q Consensus 144 --------------------------------------------------------~~~W~~~~~~f~~~---~~----~ 160 (681) ...|..+.+.+... .. . T Consensus 155 ~g~~~v~~~ayg~ty~v~ing~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Ag~~t~~~~~~a~la~~l~~~~~~~~~~~ 234 (680) T protein:vir:17 155 EGLVTIGAAGYGTSYIVDFATEDSGQQRRWAVQEMQAPKTKRKKGDGSPDEAGETTVNNWNGTGLSFRVKVEARAFLVDD 234 (680) T ss_pred eeEEEEEEeeeeeEEEEEEeccccceeeeeeeeeeeccccccccccccCCCCcceeeeeeeeeeeeeeeeeccceeeecC Confidence 01111111111100 00 0 Q ss_pred ccc----------------------cceeeecCcceeeEE-----------------EEE-------------------- Q lcl|Aclame:pro 161 PTS----------------------VTATSNNKGTDYTYR-----------------YVV-------------------- 181 (681) Q Consensus 161 ~~~----------------------~t~t~~~~~~~~t~~-----------------~~v-------------------- 181 (681) +.. .+.++...+..+... +.. T Consensus 235 g~~~~~~y~~~~~l~~tg~~~~~~~~t~~v~~~G~~y~IsI~~~~~~~~~~~~~s~~~~t~~~~~a~~at~~~Ia~~L~~ 314 (680) T protein:vir:17 235 GEEYGHNYIPYVTLLTPGNNTSPFPDTIRVDVSGEGWDIKVTKQIQSKVYANLGTAQFTTPVDQSGGGASTSDIVTGLSA 314 (680) T ss_pred CCceEEEEeeEEEEecCCccccccCceEEEecccceeEEEEccceeeEeccCccceeeeeccCCcccceeHHHHHHHHHH Confidence 000 000000000000000 000 Q ss_pred -------EEEEeccceEEe----------------c---------------------------------Ccccceeccce Q lcl|Aclame:pro 182 -------TALDAEGKTESA----------------P---------------------------------SSAGTCTNNLF 205 (681) Q Consensus 182 -------~a~~~~g~~~s~----------------~---------------------------------s~~~t~~~~~~ 205 (681) ..+...+..... . +......+++| T Consensus 315 ~i~~~~~~~~~~~g~~i~i~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~v~~~~~Lp~~a~~g~~v~v~~~~~~~~~~Yy 394 (680) T protein:vir:17 315 AINGLGTFTAESIGNVIRVRYSDPTRTDEFTMSARGGTSGTGLESIKYSVDTLAELPTKCWNDYQVAVRNTQDTEVDDYY 394 (680) T ss_pred hhcccCcEEEEECCCEEEEEeccCCCceEEEeeccCCCCceeeeeeeeeeccccccccccCCCcEEEEEeCCCCcccceE Confidence 000000111010 0 00001111222 Q ss_pred eccce--------eeeEEeeccCCceeeeecccceeEEEeeccceeEEEec-------cccccccccccccccCcccc-- Q lcl|Aclame:pro 206 TNGGA--------NTIAWSASSGASRYNVYKEQGGLYGYIGQTTGTSLVDD-------NIAPDLSVTPPIYDAVFNAA-- 268 (681) Q Consensus 206 ~~~~~--------~~~~w~a~~~~~~~~v~~~~~~~~~~~~~~~~t~~~~~-------~~~~~~~~~~~~~~~~~s~~-- 268 (681) ..... ...+|.++.++....-+...++.|.++....+.+.... ..|.++.++++..+|.|+|. T Consensus 395 v~~~~~~~~~~~~~~~~W~E~~~~~~~~~~~~~tmp~~l~r~~~g~f~~~~~~~~~~~~~~~~r~~Gdd~tnp~psF~~~ 474 (680) T protein:vir:17 395 VKFETDVEDADVPGSGYWVETVKNGDDGGLVDDTMPHVLVRNALGDFTFSSLNNSSYGKTWADRSVGSEDTNPHPTFTES 474 (680) T ss_pred EEEeccCcccCcccccceeecccCcccceeccCcceEEEEEccCceeEEEeeccccccccccccccCCcccCCCcccccC Confidence 21111 23467777666554445555666766666555433332 24788899999999999987 Q ss_pred CCceeEEEEEcCeEEEEecCCCccEEEEEeccChhcccccC--CCcCCccEEEEEcCCCceEEEEEeecC-cEEEEecCc Q lcl|Aclame:pro 269 GDYPAAVSYFEQRRCFAGTTNKPQNIWMTRSGTESAMSYSL--PVRDDDRVAFRVAAREANAIRHIVPLT-ELLLLTSSG 345 (681) Q Consensus 269 ~g~p~~v~f~~~RL~~~~~~~~p~~v~~S~~gd~~nF~~~~--~~~D~D~i~~~~~~~~~~~i~~~~~~~-~Llv~t~~~ 345 (681) ++||++|+||||||+|++ ||+|||||+||||||++++ +++|||||+++++++++++|+|+++++ +|+|||+++ T Consensus 475 G~~p~~v~f~q~RL~f~s----~~~v~~Srtgd~~nF~~~t~~~~~DdD~I~~~~ss~~~~~i~~~v~~~~~L~l~t~g~ 550 (680) T protein:vir:17 475 GNGIYGMFMYKNRLGFLT----QDAVIMSQVGDYFNFYATSGVTISDADPIDMATSDTKPVKLEAAISSTSGAILFGNQA 550 (680) T ss_pred CCCceEEEEEcceEEEee----CCeEEEEccCCcccccccccccCCCCccEEEEEcCCcceeeeEEeecCCcEEEEecCe Confidence 789999999999999995 7899999999999999986 467999999999999999999999985 799999999 Q ss_pred EEEEecCCCcccccceeEEEEeeccCCc-ccccEEeCCeEEEEEcCCC--EEEEEEEeeeccceeccchhhhhHHhcCCC Q lcl|Aclame:pro 346 EWRVASVNSDAVTPTTISVRPQSYVGAT-DVQPVVVNNTTIYGAARGG--HVRELAYNWQANGFVTGDLSLRAAHLFDNL 422 (681) Q Consensus 346 e~~~~~~~~~~ltP~~~~~~~~s~~g~~-~~~Pv~vg~~v~fv~~~g~--~vre~~~~~~~~~~~~~dlt~~~~hl~~~~ 422 (681) ||+|+++ +++|||+|++++++|.|+++ .|+|+.+|+.++|++++|+ +||||+|++++|+|+++|||+|++||+++. T Consensus 551 q~~ls~~-~~~lTP~~~~i~~~s~~~~~~~~~Pv~vG~~v~Fv~~~g~~s~vre~~y~~~~d~y~a~DlT~~a~hl~~g~ 629 (680) T protein:vir:17 551 QFRLSSP-DESFGPKTATLDKISNYTYESKADPVQTGVSMIFPTNMGTYSSVYELSTESAKGTPVIEDSSRVIPRLIPSG 629 (680) T ss_pred EEEEecC-CceecceeEEEEEEEeecccCCCCceEeCCeEEEeecCCCcceEEEEeeeeccCceehhhHHHHHHHhcCCc Confidence 9999875 56999999999999999774 6999999999999999985 799999999999999999999999999987 Q ss_pred CEEEEEEecCCCEEEEEEcCCCeEEEEEEe---cccceEEEEEeccCCceEEE Q lcl|Aclame:pro 423 DILDMAYAKAPQPIVWFISSSGKLLGLTYV---PEQQIGAWHQHDTDGVFESC 472 (681) Q Consensus 423 ~~~~~~~~~~p~~~~~~~~~dg~l~~~ty~---~~q~v~aW~~w~~~g~~~~v 472 (681) .+..++++++|..++|+.++||+|++|+|+ +||+|+|||||+|++.= + T Consensus 630 v~~~~~~~~~~~~~~~~~~~~~~l~~~~yl~~~~e~~v~aW~rw~~~~~d--~ 680 (680) T protein:vir:17 630 LTWSTASMNNDTVFFGNAKKGRNVYVFRFFNEGQERKVAGWTTWYYEDQD--H 680 (680) T ss_pred eEEEEeeCCCCeEEEEEEcCCCEEEEEEEeeCCCceEEEEEEEEecCCCC--C Confidence 677779999999999999999999999997 78889999999998742 1 No 26 >protein:vir:2625 Length: 715 # NCBI annotation: gp27 # Family: family:all:5234 # MgeID: mge:55 # MgeName: SIO1 # Cross-refs: genbank:acc:NP_064766;genbank:gi:9964636;genbank:GeneID:1263056 Probab=99.78 E-value=4.6e-16 Score=104.64 Aligned_cols=606 Identities=17% Similarity=0.186 Sum_probs=290.5 Q ss_pred CCcceE--eecccccc---cccchhcccchHHHHHHHHhhhhccEEeeccCeeeCCchhe-----eeecCCCcCceEEEE Q lcl|Aclame:pro 1 MSNVRV--LQRSFGGG---EISPEMFGRIDDVKYQSGLAICRNFVVKPQGPAENRAGFAF-----VREVKDSAKKVRLIP 70 (681) Q Consensus 1 M~~~~~--~q~~f~~G---ElsP~l~~R~D~~~y~~~~~~~~N~~~~~~Gg~~rRpG~~~-----v~~~~~~~~~~rlip 70 (681) ||+..- ..|.|-+| |-||.-+. ++..-.-+||..-..|--+||-|+.+ ++.+.-++++ |+- T Consensus 1 m~~~~~~~~vNtFv~GliTEas~ltfp-------qnasiDe~N~~l~rdG~r~RR~g~~~E~~~vls~~~vp~ga--lv~ 71 (715) T protein:vir:26 1 MPQSLTQRTVNTFIKGLITEASELTFP-------ENASVDELNCSLGRDGTRRRRKAVTLEDNHVLSDVVVPEGA--LVQ 71 (715) T ss_pred CCcccchhHHhhhhhheeeccccccCC-------ccceeeeeeeeecCCCcchhhccceeecceEEEEEeecCce--eee Confidence 997432 34677778 33444333 45566678999999999999999654 4443333222 221 Q ss_pred -EE-eC---CCCeEEEEEc-CCEEEEEeCCcEEeeCCE-EEEEe--CCCCc---hhhc-eeeEEEeccEEEEEcCCcceE Q lcl|Aclame:pro 71 -FT-YS---VTQTMVIELG-AGYFRFHTNGGTLLDGAV-PYEIA--NPYAE---ADLF-NIHYVQSADVLTLVHPNYAPR 137 (681) Q Consensus 71 -f~-~~---~~~~y~lefg-~~~irv~~~~~~v~~~~~-~~~i~--TPy~~---a~l~-~l~~~qsaD~l~lvh~~~~p~ 137 (681) -. ++ .-..-+|.|- +..+.||...+.-+..+. .-++. +-+.. ...+ .++++.....+++++|...|. T Consensus 72 ~~~W~na~G~v~~~~livqvg~~l~f~q~t~~pLs~~n~~~svdl~~~~~~vn~SPsh~~v~v~~~~G~livanp~i~~~ 151 (715) T protein:vir:26 72 TLDWYNVAGQVNLEFLVVQVNNILYFYEKSTDPLSANKYSGSVDLNTHSASNNLSPSEERVQVTSLNGYLIVASPAINTF 151 (715) T ss_pred eechhhcccccCcEEEEEEeccEEEEEeccCCccccCceeEEeeecceecccccccceeEEEEEEeeeEEEEecCCccEE Confidence 00 01 1122333333 334556555542222222 11111 21211 1112 567777778889999999998 Q ss_pred EEEECCC-CcEEEEEEeeccCcccccccce----------eeecCcceeeEEEEEEEEE-------eccceEEecCcccc Q lcl|Aclame:pro 138 ELRRLGA-TNWQLATIAFTSPVATPTSVTA----------TSNNKGTDYTYRYVVTALD-------AEGKTESAPSSAGT 199 (681) Q Consensus 138 ~l~R~~~-~~W~~~~~~f~~~~~~~~~~t~----------t~~~~~~~~t~~~~v~a~~-------~~g~~~s~~s~~~t 199 (681) -|.-.+. -+++-..+.|....+...++.. +....+-.+...-...+.. ..+.....+.. T Consensus 152 ~~~~d~~t~s~t~~~ll~r~r~f~~qg~d~~~g~~y~~~gt~~tn~~iynlyN~gw~~p~gt~~~N~~~~yiVypa~--- 228 (715) T protein:vir:26 152 YLGFNTSTEAFTATSISFKERDFEWQGSDVDVTSLYFGEGTSVSNQRIYDTYNVGWVGPKGSAALNTYGSYIVYPAL--- 228 (715) T ss_pred EEEecCCcceeEeeEEEEEeeeheeeccccccccccccCCcccCchhheecccceeecceeEEEEcCCCCceEeccc--- Confidence 8764333 2444444445444333222111 1111111111111111100 00000000000 Q ss_pred eeccceeccceeeeEEeeccCCceeeeecccceeEEEeeccceeEEEeccccccccccccccccCccccCCceeEEEEEc Q lcl|Aclame:pro 200 CTNNLFTNGGANTIAWSASSGASRYNVYKEQGGLYGYIGQTTGTSLVDDNIAPDLSVTPPIYDAVFNAAGDYPAAVSYFE 279 (681) Q Consensus 200 ~~~~~~~~~~~~~~~w~a~~~~~~~~v~~~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~s~~~g~p~~v~f~~ 279 (681) +..++.....+ .++ .+.....++. +-.-+..+-...+.. ....+....+ -..+.|+|++.|. T Consensus 229 -s~~~~S~kd~n-~af---sk~ad~ei~t------Gt~~~~~G~yi~D~~---~~g~~~leee----v~k~R~rsv~~ya 290 (715) T protein:vir:26 229 -THPWYSGKDAN-GAF---NKADWLEIYT------GSSLASNGHYVLDVF---NKARTGLTTE----VETGRFRSVAAYA 290 (715) T ss_pred -ccccCCCcccc-ccc---Chhhcccccc------ccccccCceEEEeee---ecCCccchhh----hhcCCCcceeeec Confidence 00000000000 000 0000011100 000000000000000 0111111111 1267788999999 Q ss_pred CeEEEEecC---CCccEEEEEec----cChhccc----ccC----CCcCCccEEEEEcCCCceEEEEEeecC-cEEEEec Q lcl|Aclame:pro 280 QRRCFAGTT---NKPQNIWMTRS----GTESAMS----YSL----PVRDDDRVAFRVAAREANAIRHIVPLT-ELLLLTS 343 (681) Q Consensus 280 ~RL~~~~~~---~~p~~v~~S~~----gd~~nF~----~~~----~~~D~D~i~~~~~~~~~~~i~~~~~~~-~Llv~t~ 343 (681) +|.+|+|-+ +.| .|.+||. .|--|.+ +.+ .+.|+|...+.+-+.. .|.-++-++ .||||+. T Consensus 291 GrV~yagiD~dkng~-rilfSqLv~s~~di~nCyQd~DPTsee~~dLidTDGg~iri~gah--~ii~Lv~f~~sLlvf~~ 367 (715) T protein:vir:26 291 GRVFYAGIDSAKNGG-KVYFSRLTERMSDVGNCYQVNDPTSEVLSDLLDTDGGVVRIPDAH--NIRKLHVLGASLLVFAE 367 (715) T ss_pred ceEEEeecccccCCC-eEEEehhhcchhhcccccccCCCchhhhhhhhhcCCCEEEecCCC--CceeEEEecceEEEEEe Confidence 999999543 334 7999974 4444443 332 3459999999987664 477788875 7999999 Q ss_pred CcEEEEecCCCcccccceeEEEEeeccCCcc-cccEEeCCeEEEEEcCCCEEEEEEEeeeccceeccchh-hhhHHhcCC Q lcl|Aclame:pro 344 SGEWRVASVNSDAVTPTTISVRPQSYVGATD-VQPVVVNNTTIYGAARGGHVRELAYNWQANGFVTGDLS-LRAAHLFDN 421 (681) Q Consensus 344 ~~e~~~~~~~~~~ltP~~~~~~~~s~~g~~~-~~Pv~vg~~v~fv~~~g~~vre~~~~~~~~~~~~~dlt-~~~~hl~~~ 421 (681) +|.|+|.|. +..+|.++..+.+++..||++ -.-|++|+.++|+.++| |+.+.-++.-..+.++.|| ..+..+.+. T Consensus 368 NGVWAi~G~-d~g~tATdY~ltKIs~vg~sspnSvVvv~~~i~~WsdtG--Iyal~~Nd~fn~~tAqNLTekTIq~~~~~ 444 (715) T protein:vir:26 368 NGVWAVAGV-DNVFRATEYAITRISDVGLSNENSFVVADGIPIWWGKTG--IYAVQQSENLNTPTAQNLSLSTIQTLWNN 444 (715) T ss_pred cceEEEecc-CCceeeeeeEEEEeeeeccCCCccEEEecceEEEeeCCc--EEEEEeccccCcchhhccchHHHHHHHhh Confidence 999999765 478999999999999999975 46788999999999988 9999887766789999999 566666544 Q ss_pred C---CE--EEEEEecCCCEEEEEEcCCCeEEEEEEec----ccceEEEEEeccCCce-------EEEE------------ Q lcl|Aclame:pro 422 L---DI--LDMAYAKAPQPIVWFISSSGKLLGLTYVP----EQQIGAWHQHDTDGVF-------ESCA------------ 473 (681) Q Consensus 422 ~---~~--~~~~~~~~p~~~~~~~~~dg~l~~~ty~~----~q~v~aW~~w~~~g~~-------~~v~------------ 473 (681) . .+ +.-.|......+.|+..+..++.-|+|++ +-..+|+.+|..+.+- .++. T Consensus 445 I~~dk~knVtg~fd~~e~rVyW~yPn~dt~vdykyd~vLV~dLalgaFYp~~v~~~a~~~~~~ig~~~~~~~~~~~t~~~ 524 (715) T protein:vir:26 445 ISNAKKAQVTVEYDKINQRVFWFYPDNDESVDYKYNNILVMDLALQAFYPWRVEDEASSTSYIIGTSYYGGLGSTSTETQ 524 (715) T ss_pred cchhhhcceEEEEEccCCEEEEEEcCCceeeceeecCeEEEEecccccccccccccccccceeeeeeeeCCcccccchhh Confidence 3 12 34457778899999998888888888876 2334577777543221 1100 Q ss_pred -----EEeeCCCCEEEEEEEEC--CCCceEEEEeeccCcc---ccccccceEeecceeeccCcceeeccCCccCCcEEEE Q lcl|Aclame:pro 474 -----VVAEGNEDRLYAVVRRT--IGGNEVRYVERMASRQ---FDAQADAFFVDSGLTYSGEPVSHISGLEHLEGKTVSI 543 (681) Q Consensus 474 -----~~~~~~~d~l~~~v~r~--~~g~~~~~ie~~~~~~---~~~~~~~~~lD~~~~y~~~~~~~~~gl~~l~G~~v~v 543 (681) -+.-.+++.+..+..|. ++......+|++.... |....+.-|||=+.- +. +.-...|.+ T Consensus 525 vv~~~~v~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~dw~s~-d~-~~~~~~gy~--------- 593 (715) T protein:vir:26 525 VVNGADVVVNGSDNVVATLYRDYLEGDSEIKLLVRDGTTGKMTFATFRGDTYLDWGSA-DY-KSFAEAGYD--------- 593 (715) T ss_pred eeccceEEEeccceEEEEeecccccccceEEEEEEcCCceeEEEecccCceeeecccc-ch-hhHHHhhhh--------- Confidence 00001234444444443 2333344455554321 222333334443320 00 000000000 Q ss_pred EeCCeeeccEeecCCEEEeCC---CCCeEEEeeecceeEEecceEecCCCcccccceeEEEEEEEEEeccccEEEecCCC Q lcl|Aclame:pro 544 LADGAVHPQRVVTDGAIDLDV---EAGTVHIGLPITAELQTLPVAMQLDGSFGQGRVKNINKLWLRVHRSSGIFAGPHAD 620 (681) Q Consensus 544 ~adG~~~~~~~v~~g~i~l~~---~~~~v~vG~~y~~~v~~~p~~~~~~~~~~~~~~~~i~rv~l~~~~S~~~~v~~~~~ 620 (681) +.|....... -..|+... ..+-+.-|-.|+.. ...--+-.+.+...++..- .-+.- T Consensus 594 -~~gd~~~~k~--~pyvt~~~~~tedg~v~~~~g~~p~----------------n~sSclm~~sw~ws~s~st--~~eaY 652 (715) T protein:vir:26 594 -FMGDITTFKN--APYVTTYMRVTEDGYVASGAGYEFI----------------NPSSCLMSVSWNLSKSGST--PREIY 652 (715) T ss_pred -hcccceeeec--CceEEEEEEEecccceeccCCcccc----------------CCcceEEEEEeeeccCCCC--hhhhh Confidence 1111111000 00111100 00001111111100 0001111222222222210 00001 Q ss_pred eeEEeeeecccccCCcC----CcccceEEEEecCCcCcceEEEEEECCccCEEEEEEEEEEEEcC Q lcl|Aclame:pro 621 ALTEVKQRTSEPYGSPP----ALKSEEIPLVLSPKWGDSGQLFVRQADPLPLMIVSMSAEIAIGA 681 (681) Q Consensus 621 ~~~~~~~~~~~~~~~~~----~~~tG~~~v~~~~~~~~~~~v~I~~~~P~P~tvlai~~ev~vg~ 681 (681) +++..+...+++++..- .+.| .-++ . |..+-.+++|++..--.|+|++.++ +|. T Consensus 653 k~~~~~~~~p~~~s~~~yp~~~VvT-Ksri--R-G~Gr~~~~rf~s~~gKdlhl~Gysi---lg~ 710 (715) T protein:vir:26 653 KLKDVPVVNPNDLSSINYPTDTVVT-KSKV--R-GRGRSMKFRFESVAGKDFHLVGYEV---IGA 710 (715) T ss_pred eecceeeeCCCccccccCCcceeEe-eeee--e-ccceEEEEEEEecCCcceEEEeEEE---Eec Confidence 11111111223333211 1122 2233 3 3467889999999999999998654 344 No 27 >protein:vir:95475 Length: 771 # NCBI annotation: hypothetical protein ORF038 # Family: family:all:5234 # MgeID: mge:1570 # MgeName: PA11 # Cross-refs: genbank:acc:YP_001294631;genbank:gi:149408197;genbank:GeneID:5237042 Probab=99.64 E-value=1.5e-13 Score=90.84 Aligned_cols=621 Identities=16% Similarity=0.155 Sum_probs=287.9 Q ss_pred CCcceE--eecccccc---cccchhcccchHHHHHHHHhhhhccEEeeccCeeeCCchhe-------eeecCCCcCceEE Q lcl|Aclame:pro 1 MSNVRV--LQRSFGGG---EISPEMFGRIDDVKYQSGLAICRNFVVKPQGPAENRAGFAF-------VREVKDSAKKVRL 68 (681) Q Consensus 1 M~~~~~--~q~~f~~G---ElsP~l~~R~D~~~y~~~~~~~~N~~~~~~Gg~~rRpG~~~-------v~~~~~~~~~~rl 68 (681) ||+..- ..|.|-+| |-||.-+. ++..-.-+||..-..|--.||-|+.+ ++.+.-++ .+|+ T Consensus 1 m~~~~~~~~vNtFv~GliTEas~ltfp-------qnasiDe~N~~l~rdG~r~RR~g~~~E~~~~~vls~~~vpa-~g~~ 72 (771) T protein:vir:95 1 MAKTTNAAEFNTFVGGLITEASPLTFP-------QNASIDEVNFILNRDGSRNRRNGMDFENGATKVVCNTLVPA-DGTI 72 (771) T ss_pred CCcccchhHHhhhhhheeeccccccCC-------ccceeeeeeeeecCCCcchhhceeeeecCCceEEEEEEecc-cceE Confidence 997532 35678788 33444433 45566678999999999999999654 33322221 2233 Q ss_pred EEEEeC------CCCeEEEEEc-CCEEEEEeCCcEEeeCCEEEEEeCCCCchhhceeeEEEeccEEEEEcCCcceEEEEE Q lcl|Aclame:pro 69 IPFTYS------VTQTMVIELG-AGYFRFHTNGGTLLDGAVPYEIANPYAEADLFNIHYVQSADVLTLVHPNYAPRELRR 141 (681) Q Consensus 69 ipf~~~------~~~~y~lefg-~~~irv~~~~~~v~~~~~~~~i~TPy~~a~l~~l~~~qsaD~l~lvh~~~~p~~l~R 141 (681) .-=+.+ .-...+|.|- +..+.||...+.-+..+..+.-+. -.-...+.|+++.....+++++|...|.-|.- T Consensus 73 ~v~~~~W~na~G~v~~~~livqvg~~l~f~q~t~~pLs~~n~~~~a~-~nlSPsh~isv~v~~G~livanp~i~~~~~~~ 151 (771) T protein:vir:95 73 AVTSHNWENAGGEVGRWISLVQVGTELKFFQTTGETLSEGNFYNYQF-VNMSPSHKLSYAVVDGLLVVANGSRDIYVFEY 151 (771) T ss_pred EeeeechhhcccccCcEEEEEEeccEEEEEecCCCcccccceeeeec-ceeccceeEEEEEeeeEEEEecCCccEEEEEe Confidence 111111 1123333333 334556555543333333322111 01123346888887788999999999988764 Q ss_pred CCC-CcEEEEEEeeccCccccc--------------ccceeeecCcceeeEEEEEEEEEeccceEEecCcccce------ Q lcl|Aclame:pro 142 LGA-TNWQLATIAFTSPVATPT--------------SVTATSNNKGTDYTYRYVVTALDAEGKTESAPSSAGTC------ 200 (681) Q Consensus 142 ~~~-~~W~~~~~~f~~~~~~~~--------------~~t~t~~~~~~~~t~~~~v~a~~~~g~~~s~~s~~~t~------ 200 (681) .+. -+++-..+.|... +..+ ....+....+-.+...-...+..... ..+..... T Consensus 152 d~~t~s~t~~~ll~r~r-f~~q~~~~G~d~~~~~~~~~~gt~~tn~~iynlyN~gw~~pk~~----~~snt~~~~iV~~y 226 (771) T protein:vir:95 152 DSGSVSVTTKRLLVRDL-FGVQDIVNGVDLRQGNDIATRPTVQTNAHIYNLRNQTFGVPRVT----WHSNEPSDPIVTFR 226 (771) T ss_pred cCCcceeEeeeeeeeeh-hhccccccccceecccccccCCcccCchhheeccccceeccccc----cccCCccccceEee Confidence 332 2333333333321 1111 01112222222222222222211110 00000000 Q ss_pred ---e-----ccceeccceeeeEEeeccC---Cceeee-------ecccceeEEEeeccceeEEEecccccccccccc--- Q lcl|Aclame:pro 201 ---T-----NNLFTNGGANTIAWSASSG---ASRYNV-------YKEQGGLYGYIGQTTGTSLVDDNIAPDLSVTPP--- 259 (681) Q Consensus 201 ---~-----~~~~~~~~~~~~~w~a~~~---~~~~~v-------~~~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~--- 259 (681) + +....++.-++..|.+-.. ...+.+ +....|.+-...-+-+ ...+.+.+..+-+ T Consensus 227 ~a~~g~~pS~sd~~N~a~~k~~~~Ei~t~~~f~~~~~~~~~~Gt~~~~~G~yi~da~~~g----~~~Lt~~ve~~gr~~s 302 (771) T protein:vir:95 227 SAASGKFPSNSDSVNLALSKRADVEPSTTDRFRAEDIVLNPIGTYETARGFFIIDAMARG----KSRLEEIVKLKQRYPS 302 (771) T ss_pred eccCCCCcCCceeeccccchhhccceeeecccchhhhhhcccCcccccCcceeeehhhhc----ccccceeeeccccchh Confidence 0 0000011111122221111 111111 0011111111111000 0111111110000 Q ss_pred -----ccccCccccCCceeEEEEEcCeEEEEe-----cCCCcc------EEEEEec----cChhccc----ccC----CC Q lcl|Aclame:pro 260 -----IYDAVFNAAGDYPAAVSYFEQRRCFAG-----TTNKPQ------NIWMTRS----GTESAMS----YSL----PV 311 (681) Q Consensus 260 -----~~~~~~s~~~g~p~~v~f~~~RL~~~~-----~~~~p~------~v~~S~~----gd~~nF~----~~~----~~ 311 (681) ...+-- ..-|--+.|+-|..|.|++| .+...| +|.+||. .|--|.+ +.+ .+ T Consensus 303 ~~~~~~~l~~~-~t~~~~~~vaeyagRvwYag~~~~~iD~dkng~~~~~~ilfSqLv~s~~di~nCyQd~DPTsee~~dL 381 (771) T protein:vir:95 303 LSFGVSSLPQD-ETPGGASVVCEYAGRVWYAGFSGQIIDGDDQSPRLVSYILFSQLVDSPADIVNCYQDGDPTSTEEPEL 381 (771) T ss_pred hhccccccccc-cCCCCceeEEeeeeeEEEecceeEEeeccccCCceeeeEeeehhhcchhhcccccccCCCchhhhhhh Confidence 011100 11123466999999999999 333333 5999973 4444443 432 34 Q ss_pred cCCccEEEEEcCCCceEEEEEeecC-cEEEEecCcEEEEecCCCcccccceeEEEEeeccCCcc-cccEEeCCeEEEEEc Q lcl|Aclame:pro 312 RDDDRVAFRVAAREANAIRHIVPLT-ELLLLTSSGEWRVASVNSDAVTPTTISVRPQSYVGATD-VQPVVVNNTTIYGAA 389 (681) Q Consensus 312 ~D~D~i~~~~~~~~~~~i~~~~~~~-~Llv~t~~~e~~~~~~~~~~ltP~~~~~~~~s~~g~~~-~~Pv~vg~~v~fv~~ 389 (681) .|+|...+.+-+.. .|.-++-++ .||||+.+|.|+|.++++..+|.++..+.+++..||++ -.-|++|+.++|+.+ T Consensus 382 idTDGg~iri~gah--~ii~Lv~f~~sLlvfc~NGVWAi~ggsd~g~tAtdY~ltKIs~vg~sspnSvVvvg~~i~ywsd 459 (771) T protein:vir:95 382 VDTDGGFIRIEGAH--DIINLVNVGSAVMVVAANGIWMIQGGSDYGFTATNYLVTKISEHGCSSPNSVVVVDNSFMYWGD 459 (771) T ss_pred hhcCCCEEEecCCC--CceeEEEecceEEEEEecceEEEEeccCCceeeeeeEEEEeeeeccCCCccEEEecceEEEeeC Confidence 59999999987664 377888875 79999999999998887889999999999999999975 467889999999999 Q ss_pred CCCEEEEEEEeeeccceeccchh-hhhHHhcCCC---CE--EEEEEecCCCEEEEEEcC--CCe-EEE--EEEecccceE Q lcl|Aclame:pro 390 RGGHVRELAYNWQANGFVTGDLS-LRAAHLFDNL---DI--LDMAYAKAPQPIVWFISS--SGK-LLG--LTYVPEQQIG 458 (681) Q Consensus 390 ~g~~vre~~~~~~~~~~~~~dlt-~~~~hl~~~~---~~--~~~~~~~~p~~~~~~~~~--dg~-l~~--~ty~~~q~v~ 458 (681) +| |+.+.-++ -..+.++.|| .....|.+.. .+ +.-.|.....++.|+..+ |++ -+. +-+ +-... T Consensus 460 tg--Iyal~~Nd-fn~~tAqnLTekTIq~~~~~I~~dk~knVtg~fd~~e~rvyw~yPn~~D~~~e~~t~LV~--dLalg 534 (771) T protein:vir:95 460 DG--IYHLTRNQ-YGDYVANNLTEKTIQKYYEKIPSDAILNATGFYDSYDKKVKWLYNTVLDGRTEPVTELVF--DLALG 534 (771) T ss_pred Cc--eEEEeecc-cCcchhhccchHHHHHHHhhcchhhhcceEEEEEccCCEEEEEecceecCCCcceeeeee--eeccc Confidence 88 98887765 5669999999 5666665543 12 334577778889998874 221 111 111 22345 Q ss_pred EEEEe---c-cCCce----EE--------------E--E--EEeeCCCCEEEEEEEEC--CCCceEEEEeeccCc---cc Q lcl|Aclame:pro 459 AWHQH---D-TDGVF----ES--------------C--A--VVAEGNEDRLYAVVRRT--IGGNEVRYVERMASR---QF 507 (681) Q Consensus 459 aW~~w---~-~~g~~----~~--------------v--~--~~~~~~~d~l~~~v~r~--~~g~~~~~ie~~~~~---~~ 507 (681) |+.+| + ..|.. .+ | . -+-..+++.......|+ +++.....+|+.... .| T Consensus 535 aFYp~~i~~~~ag~l~~~vg~~~~p~~~lv~T~~eV~v~~~~v~~tG~~vtV~~~~r~~~~~~~~y~~~~~dg~~g~~~F 614 (771) T protein:vir:95 535 AFYPSKIGSLTAGRLPIPVGSVKIPPYKLVETGEEVTVASEQVTATGELVTVKVSTRSPVIRETKYIIVEKLSSPMRISF 614 (771) T ss_pred ccccccccccccCccceeeeeeecCccccccccceEEecceeeEecCCceEEEEEEeeccccceEEEEEEecCCCeeEEe Confidence 78888 4 23332 00 0 0 00001122222222221 122222223332211 01 Q ss_pred cccccceEeecceeeccCcceeeccCCccCCcEEEEEeCCeeeccEeecCCEEEeCCCCCeEEEeeecceeEEe-----c Q lcl|Aclame:pro 508 DAQADAFFVDSGLTYSGEPVSHISGLEHLEGKTVSILADGAVHPQRVVTDGAIDLDVEAGTVHIGLPITAELQT-----L 582 (681) Q Consensus 508 ~~~~~~~~lD~~~~y~~~~~~~~~gl~~l~G~~v~v~adG~~~~~~~v~~g~i~l~~~~~~v~vG~~y~~~v~~-----~ 582 (681) ....+.-|+|=+ ..+.. +|. ++.+. .......-.++|..+-..|++ - T Consensus 615 a~~~~~~f~DW~------------sv~~~---~vd-------y~sy~------~~gY~~~gd~~~~k~~PYit~y~~~te 666 (771) T protein:vir:95 615 GGYTDEEFVDWK------------SVDGI---GVD-------APAYL------LTGYLAGGDYQREKFVPYITFHFKKTE 666 (771) T ss_pred ccccCcceeecc------------cCCCc---ccc-------hHHHH------HhhhhccchheeeeccceEEEEEEeec Confidence 111111122211 11100 000 00000 000000111122211111111 1 Q ss_pred ceEecCCCccc--ccceeEEEEEEEEEecccc-EEEecCCCeeEEeeeec---ccccCCcCC----cccceEEEEecCCc Q lcl|Aclame:pro 583 PVAMQLDGSFG--QGRVKNINKLWLRVHRSSG-IFAGPHADALTEVKQRT---SEPYGSPPA----LKSEEIPLVLSPKW 652 (681) Q Consensus 583 p~~~~~~~~~~--~~~~~~i~rv~l~~~~S~~-~~v~~~~~~~~~~~~~~---~~~~~~~~~----~~tG~~~v~~~~~~ 652 (681) .=++....|.- ....--+-.+.+....+.. -+++.. .+-|+++. .+.+++... ++.-.-++ . |. T Consensus 667 dg~v~~~~g~~~p~n~sSclm~~sw~ws~s~~t~k~~~~---~eaYk~~~~~~p~~~~~~~yp~~~VV~TKsri--R-G~ 740 (771) T protein:vir:95 667 DGFVEDAEGDWTPTNQSSCMVQSQWSWTNSPASNKWGRT---WQAYRFRRHFFPDNIDNQFDDGNSVVETKSRL--R-GS 740 (771) T ss_pred ccceecccccccccCCcceEEEEEeeeecCCCCCccccc---hheeeecceeccCCcchhcCCccceeeeehee--e-ec Confidence 11111111100 0111122233344444332 222221 12222221 223322222 22112233 3 34 Q ss_pred CcceEEEEEECCccCEEEEEEEEEEEEcC Q lcl|Aclame:pro 653 GDSGQLFVRQADPLPLMIVSMSAEIAIGA 681 (681) Q Consensus 653 ~~~~~v~I~~~~P~P~tvlai~~ev~vg~ 681 (681) .+-.+++|++..---|+|++.++-|+|.| T Consensus 741 Gr~~~~rf~s~~gKdlhl~Gysil~~~~~ 769 (771) T protein:vir:95 741 GKVLSLYITTEPKKNLHIYGWSMLVDVNG 769 (771) T ss_pred ceEEEEEEEecCCcceEEEeEEEEEeecC Confidence 67889999999999999999999999999 No 28 >protein:vir:80177 Length: 1027 # NCBI annotation: tail tubular protein B # Family: family:all:12083 # MgeID: mge:1878 # MgeName: Pf-WMP3 # Cross-refs: genbank:acc:YP_001285795;genbank:gi:148747829;genbank:GeneID:5220453 Probab=99.54 E-value=1.5e-14 Score=96.41 Aligned_cols=656 Identities=16% Similarity=0.229 Sum_probs=297.3 Q ss_pred CCcceEeecccccccccchhcc--cchH-----HHHHHHHhhhhccEEeeccCeeeCCchheeeecCCCcCceEEEEEEe Q lcl|Aclame:pro 1 MSNVRVLQRSFGGGEISPEMFG--RIDD-----VKYQSGLAICRNFVVKPQGPAENRAGFAFVREVKDSAKKVRLIPFTY 73 (681) Q Consensus 1 M~~~~~~q~~f~~GElsP~l~~--R~D~-----~~y~~~~~~~~N~~~~~~Gg~~rRpG~~~v~~~~~~~~~~rlipf~~ 73 (681) |.+. .-.+.=.+-||.|+-.. -.|+ ..=-.+--.+.|+-+...|.+.||-||..+-.... +.++.-.|..- T Consensus 1 mvns-ferrtQQ~~dlG~~s~~F~GL~~t~S~~~IP~~~SP~~~N~DV~~~G~V~kR~GT~i~~~Y~~-t~~~~t~~vks 78 (1027) T protein:vir:80 1 MVNS-FERRTQQGDDLGIRSSNFGGLNTTASPLNIPYEDSPNLLNVDVDVSGNVSKRQGTEILLKYAN-TTPVYTFPVKS 78 (1027) T ss_pred CCcc-hhhhhccccccccccccccccccccccccccccCCCceEEeecccCcceeehhhhhhhhhhcc-CCceeeeeehh Confidence 5431 11222234555554321 1222 22233445688999999999999999999876553 23444444443 Q ss_pred CCCCeEEEEEcCCEEEEEeCCcEEeeCCEEEEEeCCCCchh--hceeeEE---EeccEEEEEcCCcceEEEE---EC--- Q lcl|Aclame:pro 74 SVTQTMVIELGAGYFRFHTNGGTLLDGAVPYEIANPYAEAD--LFNIHYV---QSADVLTLVHPNYAPRELR---RL--- 142 (681) Q Consensus 74 ~~~~~y~lefg~~~irv~~~~~~v~~~~~~~~i~TPy~~a~--l~~l~~~---qsaD~l~lvh~~~~p~~l~---R~--- 142 (681) --+-.|+|--..+-+.+---.+. .-|.+.+++.-..++. ++- -|. ..-|.+.|..|.|+|-.++ |+ T Consensus 79 ~LG~dYvLt~~~GLL~~~~~~~~--AVG~~K~~s~V~~aa~~~V~P-~F~~~S~~~~R~LILT~~~~~VQ~~F~E~T~t~ 155 (1027) T protein:vir:80 79 VLGYDYVLTKSGGLLEVAGVIGK--AVGAYKSFSNVFSAAAANVKP-YFTLLSDVEPRVLILTGTNTPVQVKFVEQTFTT 155 (1027) T ss_pred hccceeeEecCCceEEEeeeccc--ccccchhhhhhhhhhhcccCc-eeEEccCCCCcEEEEcCCCceEEEEEeeeeeee Confidence 34555666554444443210000 0133444433222211 111 122 2357788888888775432 22 Q ss_pred -C---CC--------------------------------------------cEEEEE-EeeccCc--------------- Q lcl|Aclame:pro 143 -G---AT--------------------------------------------NWQLAT-IAFTSPV--------------- 158 (681) Q Consensus 143 -~---~~--------------------------------------------~W~~~~-~~f~~~~--------------- 158 (681) . ++ +|+..- .+|..+. T Consensus 156 T~~s~~~~~V~~~~s~~~~~~~~L~~~~N~tS~~~~~~~~T~~AlT~~NlP~~S~~mt~~~V~~~W~WWAESl~~~G~~~ 235 (1027) T protein:vir:80 156 TSGSPTTTVVIPNASRFQYDTPILYMNRNFTSGATYSYNSTTRALTISNLPSWSGSMTFDLVLPVWSWWAESLRWFGDRF 235 (1027) T ss_pred eccCCccceEeecccceeecCeeEEecccccceeEeeccceEEEEEeccCCcceeEEEEeEEecchhhhhhHHhhhhhHH Confidence 0 00 011000 0000000 Q ss_pred ----------cccccc--------------------------------ceeeecCc-----ceeeE----EEEE------ Q lcl|Aclame:pro 159 ----------ATPTSV--------------------------------TATSNNKG-----TDYTY----RYVV------ 181 (681) Q Consensus 159 ----------~~~~~~--------------------------------t~t~~~~~-----~~~t~----~~~v------ 181 (681) -.+.++ +.++..++ ..+-+ .+.+ T Consensus 236 ~~~~SRFNV~~~DQ~V~IP~~L~sDlD~i~~~~~~~~m~~~~ta~F~~~~~~~~T~~P~~AD~YG~~~G~~~~~~~~A~L 315 (1027) T protein:vir:80 236 YDAVSRFNVNKADQSVAIPAALRSDLDTIQGTYGRYPMLLYKTATFNDTYTFSNTGQPANADSYGWGDGSVYNVGASAYL 315 (1027) T ss_pred HhhhhhcccccccccccchhHHhhhhhhhhhccCCccEEEEEeeeecCceeecCCCCCCCcccccccCCceEeeccccee Confidence 000000 00000000 00000 0000 Q ss_pred --EE-EEeccceE------------------EecCcccceeccceeccceeeeE--Eee-ccCC-ceeeeeccc------ Q lcl|Aclame:pro 182 --TA-LDAEGKTE------------------SAPSSAGTCTNNLFTNGGANTIA--WSA-SSGA-SRYNVYKEQ------ 230 (681) Q Consensus 182 --~a-~~~~g~~~------------------s~~s~~~t~~~~~~~~~~~~~~~--w~a-~~~~-~~~~v~~~~------ 230 (681) .+ +...|++- ......+...++.-+.......+ |.. ..+. ..+.+++.. T Consensus 316 ~~sPFF~TFG~~~t~TP~P~~~V~lLR~RELRFN~G~GA~~~~L~V~~D~~~~s~N~ssT~~~T~R~~~L~~A~G~~~~~ 395 (1027) T protein:vir:80 316 NTSPFFATFGDTRTPTPQPPETVHLLRQRELRFNYGNGATGANLRVTVDGTALSANYSSTVAGTNRAYALYKADGTLCTS 395 (1027) T ss_pred eccceEEEeccccCCCCCchhheeeeeeeeeeeccCCCCCCcceEEEEcceeeeeeeeeeeeecceeEEEeeeccccccc Confidence 00 00001000 01111222222222111111111 110 0111 111111111 Q ss_pred -c---eeEEEeecc-------ceeEEE---ecccccccccc------------ccccccCccccCCceeEEEEEcCeEEE Q lcl|Aclame:pro 231 -G---GLYGYIGQT-------TGTSLV---DDNIAPDLSVT------------PPIYDAVFNAAGDYPAAVSYFEQRRCF 284 (681) Q Consensus 231 -~---~~~~~~~~~-------~~t~~~---~~~~~~~~~~~------------~~~~~~~~s~~~g~p~~v~f~~~RL~~ 284 (681) . ..+.+.+++ .+.+.. ...+|..-..+ .....-+--..+.+|+-.+.||.||++ T Consensus 396 A~dlayY~A~~GATPL~IS~~aA~t~~~~~R~yi~~~~~~T~~~~~~G~Y~k~YGlG~~~~Y~~~~F~~I~TvY~~RLvL 475 (1027) T protein:vir:80 396 ASDLAYYIAFTGATPLGISPTAAVTITNVDRTYIGSAATQTDNAYVQGGYFKVYGLGLWANYGTGQFPRIATVYQSRLVL 475 (1027) T ss_pred cccceeeeeeeccccccccccceeeeecCceeeeeeeccccCCceEeeeEEEEEEeeeeeecCCccccceeeeeeeeeEE Confidence 0 011111111 111000 00011100001 001111113467789999999999999 Q ss_pred EecCCCccEEEEEeccC------hhcccccC---CCcCCccEEEEEcCCCce-EEEEEeec-CcEEEEecCcEEEEecCC Q lcl|Aclame:pro 285 AGTTNKPQNIWMTRSGT------ESAMSYSL---PVRDDDRVAFRVAAREAN-AIRHIVPL-TELLLLTSSGEWRVASVN 353 (681) Q Consensus 285 ~~~~~~p~~v~~S~~gd------~~nF~~~~---~~~D~D~i~~~~~~~~~~-~i~~~~~~-~~Llv~t~~~e~~~~~~~ 353 (681) .+..+.|..|.+|.+|| ++||+.-+ .-.|+||+++.++|.|.. .|..++.- +.|++||..+.|.+.|+ T Consensus 476 ~~~t~~~~~~~~S~~GD~~~~G~~Y~F~QvTD~L~G~~sDPF~L~VsSsq~~d~vT~~~~WQ~~LFV~T~~~T~~~~GG- 554 (1027) T protein:vir:80 476 GGFTNDPTRVVFSATGDTVEGGVKYNFFQVTDDLDGLDSDPFDLVVSSSQADDYVTGLVEWQSSLFVLTRRATFRANGG- 554 (1027) T ss_pred eccCCCcceEEEeecCCcccCceeeeeeeeehhhccCcCCceeEEEecccccceeeeeeeeceeEEEEecceeEEeecC- Confidence 99999999999999888 88887532 123899999999987755 46677775 57999999999999975 Q ss_pred CcccccceeEEEEeeccCC-cccccEEeCCeEEEEEcCCCEEEEEEEeeeccceeccchhhhhHHhcCCC------CEEE Q lcl|Aclame:pro 354 SDAVTPTTISVRPQSYVGA-TDVQPVVVNNTTIYGAARGGHVRELAYNWQANGFVTGDLSLRAAHLFDNL------DILD 426 (681) Q Consensus 354 ~~~ltP~~~~~~~~s~~g~-~~~~Pv~vg~~v~fv~~~g~~vre~~~~~~~~~~~~~dlt~~~~hl~~~~------~~~~ 426 (681) +..++|..-.++.+|++|. +.-.-|+....++|..+.| ++.+...-+.+.|++.|-|+.+..+|.+- .... T Consensus 555 d~t~~~a~~~VN~iSs~G~~N~~~VV~T~~~V~Yl~~~G--~F~L~~r~~~~~Y~A~EkSiKIR~~F~~~~~ta~~~~~W 632 (1027) T protein:vir:80 555 DATISPARRFVNYISSLGLVNPFSVVRTDTAVFYLSDSG--VFNLTPRVEDGEYQAIEKSIKIRKVFGKTTSTAVSSAAW 632 (1027) T ss_pred ccccchhHHHHHHHHhhcccCcceEEEeeeEEEEeeccc--eeeccCCccCCcchhhhhhhhhhhhhhhhccccccceee Confidence 4569999999999999997 5566788899999999977 99999999999999999999999998752 1223 Q ss_pred EEEecCCCEEEEEEcCCC---eEEEEEEecccceEEEEEeccCCceEEEEEEeeC---CCCEEEEEEEECCCCceEEEEe Q lcl|Aclame:pro 427 MAYAKAPQPIVWFISSSG---KLLGLTYVPEQQIGAWHQHDTDGVFESCAVVAEG---NEDRLYAVVRRTIGGNEVRYVE 500 (681) Q Consensus 427 ~~~~~~p~~~~~~~~~dg---~l~~~ty~~~q~v~aW~~w~~~g~~~~v~~~~~~---~~d~l~~~v~r~~~g~~~~~ie 500 (681) |.|.++ ..++++.+..| +...-.|.-.---.+|+..++.|.|+--...|-- ..|. |++.-. -|-+++++. T Consensus 633 m~~~q~-~~~LYv~L~~~~eT~~~S~~~~~N~~~DSWt~~~t~~~Fk~YtghP~V~~~~~~s-~L~~v~--~~~TV~ML~ 708 (1027) T protein:vir:80 633 MSFDQN-RKVLYVALPRGSETTVASALYVYNTFRDSWTQYDTLGGFKTYTGHPYVDTVLGDS-FLLMVA--YGGTVCMLK 708 (1027) T ss_pred eeeccC-CceEEEEecCCCcchhhhhhhhhhhhhcchhhhhcccCcccccCCchhhhhhhhh-hhhhhc--Cchhhhhhh Confidence 334333 33333333221 1222112111222388888888777644322221 1111 111110 111222211 Q ss_pred eccC-----cccccccc--------ce------------Eeecce---------ee---------------------ccC Q lcl|Aclame:pro 501 RMAS-----RQFDAQAD--------AF------------FVDSGL---------TY---------------------SGE 525 (681) Q Consensus 501 ~~~~-----~~~~~~~~--------~~------------~lD~~~---------~y---------------------~~~ 525 (681) .-.+ +.+.-.-+ .. -+|-.+ +| +|+ T Consensus 709 ~~~~~YvDFF~~CG~~~~~Vlt~~~GIY~~~~P~wnsP~I~~~svs~tt~~~~q~Ye~~T~~~vvpydnvedlsiyvnGT 788 (1027) T protein:vir:80 709 LYGSRYVDFFNKCGSFTGNVLTANSGIYTWTAPFWNSPVISNISVSGTTTLAVQRYELPTDLQVVPYDNVEDLSIYVNGT 788 (1027) T ss_pred hhcchhhhhhhhcccceeeEEecCCceeEeecccccCCeeeEEEeeccchhhhheeccccccccccccccccceeeecce Confidence 1111 00000000 00 011000 01 111 Q ss_pred cc----------eeeccC-CccCCcEEEEEe----------CCee----eccEeecCCEEEeCCC--------------- Q lcl|Aclame:pro 526 PV----------SHISGL-EHLEGKTVSILA----------DGAV----HPQRVVTDGAIDLDVE--------------- 565 (681) Q Consensus 526 ~~----------~~~~gl-~~l~G~~v~v~a----------dG~~----~~~~~v~~g~i~l~~~--------------- 565 (681) .. .++.-| +..+|++++++- ||.. ++...+ ++...+++. T Consensus 789 ~Ls~~~~~~~~~~~i~LL~~~~~~~~~s~Vprcpvnvsy~~~~~~~~TT~~TV~~-N~~~~iQ~Tdy~~~GS~L~~~~~L 867 (1027) T protein:vir:80 789 RLSFGTDWVKQGKAIYLLSDPGDGKTVSIVPRCPVNVSYQGDVTFDETTAQTVWV-NNLLQIQGTDYTLSGSTLTFTDTL 867 (1027) T ss_pred eEeecCchhhcCCEEEEecCCCCcceEEEEecccccccccccccccccccceEEe-cceeeeccceeeeccCcccccccc Confidence 00 000000 223466776661 2211 111111 222222221 Q ss_pred -CCeEEEeeecceeEEecceEecCCCcccccceeEEEEEEEEEeccccEE---Eec--CCCeeEEeeeecccccCCcCCc Q lcl|Aclame:pro 566 -AGTVHIGLPITAELQTLPVAMQLDGSFGQGRVKNINKLWLRVHRSSGIF---AGP--HADALTEVKQRTSEPYGSPPAL 639 (681) Q Consensus 566 -~~~v~vG~~y~~~v~~~p~~~~~~~~~~~~~~~~i~rv~l~~~~S~~~~---v~~--~~~~~~~~~~~~~~~~~~~~~~ 639 (681) ...+++|..|.+.++-+-+.+ .+.++.||+.++.|.+.+---+- ++- ..+..+++.... ..- T Consensus 868 tN~~~~~G~~Y~S~Y~SP~F~L-----~SL~~LKk~K~~~L~~Dnedvlpvytigdlasgqdvddlvgkw-------ktr 935 (1027) T protein:vir:80 868 TNAVVEVGNAYISYYQSPMFLL-----GSLSNLKKVKHVYLYFDNEDVLPVYTIGDLASGQDVDDLVGKW-------KTR 935 (1027) T ss_pred ccceEEEeecchhhhcchhhhh-----hhhhhhhheeeeEEEEcCCcceeeeeeccccCCCchhHhhhhh-------ccc Confidence 346789999999998776665 34577889999988876643321 110 000111110000 000 Q ss_pred ccceEEEEecCCcCcceEEEEEE--------------------CCc--cCEEEEEEEEEEEEcC Q lcl|Aclame:pro 640 KSEEIPLVLSPKWGDSGQLFVRQ--------------------ADP--LPLMIVSMSAEIAIGA 681 (681) Q Consensus 640 ~tG~~~v~~~~~~~~~~~v~I~~--------------------~~P--~P~tvlai~~ev~vg~ 681 (681) ....+++.....-..+.+..|.+ ..- +.-.+|++.+.-.||= T Consensus 936 ananisvtydsentsetsydiysfsdlvwdnaffdvdptnlqstryalfkeallgvgynyqigv 999 (1027) T protein:vir:80 936 ANANISVTYDSENTSETSYDIYSFSDLVWDNAFFDVDPTNLQSTRYALFKEALLGVGYNYQIGV 999 (1027) T ss_pred ccceeEEEecCcCcccceeeeeehhhhhcccceecccccccchhhHHhhhhhHhhcccceeeee Confidence 00111222111100111222211 111 1124566666666654 No 29 >protein:vir:8837 Length: 513 # NCBI annotation: constituent protein # Family: family:all:4957 # MgeID: mge:158 # MgeName: PaP3 # Cross-refs: genbank:acc:NP_775245;genbank:gi:27476043;genbank:GeneID:2700591 Probab=99.46 E-value=1.1e-11 Score=80.58 Aligned_cols=481 Identities=13% Similarity=0.108 Sum_probs=236.9 Q ss_pred CCcceEeecccccccccchhcccchHHHH---HHHHhhhhccEEeeccCeeeCCchheeeecCCCcCceEEEEEEeCCCC Q lcl|Aclame:pro 1 MSNVRVLQRSFGGGEISPEMFGRIDDVKY---QSGLAICRNFVVKPQGPAENRAGFAFVREVKDSAKKVRLIPFTYSVTQ 77 (681) Q Consensus 1 M~~~~~~q~~f~~GElsP~l~~R~D~~~y---~~~~~~~~N~~~~~~Gg~~rRpG~~~v~~~~~~~~~~rlipf~~~~~~ 77 (681) ||-.++---. .-|-| .|++-| .++-..+.|+++. .|++.||||..=+.+.... ...=++||. ..+. T Consensus 1 ~~~~~~~~~~-~~g~~-------~d~~p~~lp~~a~s~~~N~~~~-~~~~~~~~g~~pv~a~~~~-~~~g~~~~~-~~g~ 69 (513) T protein:vir:88 1 MALERQEVKN-PTGIV-------TDIAPADLPLDKWSFGNNVRFK-NGKAQKALGHSPIFDTAQA-PILDMFPFI-RNNI 69 (513) T ss_pred CCcCChhhcc-cccce-------eccChhhcCCCcceeeeeeeEe-cceeeecCccceeeecCCC-Cceeeeeee-cCCC Confidence 6654432222 22221 222211 1444667777765 6889999999988554322 222356775 4677 Q ss_pred eEEEEEcCCEEEEEeCCcEEee-CCEEEEEeCCCCchhhceeeEEEeccEEEEEcCCcceEEEEECCCCcEEEEEEeecc Q lcl|Aclame:pro 78 TMVIELGAGYFRFHTNGGTLLD-GAVPYEIANPYAEADLFNIHYVQSADVLTLVHPNYAPRELRRLGATNWQLATIAFTS 156 (681) Q Consensus 78 ~y~lefg~~~irv~~~~~~v~~-~~~~~~i~TPy~~a~l~~l~~~qsaD~l~lvh~~~~p~~l~R~~~~~W~~~~~~f~~ 156 (681) .++|.-+.++++.+...+ ..+ ++ +||+...-..-+++|-+|.+++++...+|+.+ +.++++++++. T Consensus 70 ~~~~~~~~~~~~~~~~~t-~~dvs~------~~~~~~~~~~w~~~~f~~~i~a~ng~~~~q~~---~~~s~~f~dl~--- 136 (513) T protein:vir:88 70 PYWLLCSEKRLYLADGTT-IIDVSP------GPYSASVTNRWSVGSFNGVIFANDGVNPPHHL---PPTESVFRVLP--- 136 (513) T ss_pred eEEEEeeceEEEEecCce-eeeccc------cceeecccCceeeeeecCEEEEEcCCCcceEE---cCCCceeeecc--- Confidence 777877887776655433 221 11 35555555566778888888887766555553 11111111100 Q ss_pred CcccccccceeeecCcceeeEEEEEEEEEeccceEEecCcccceeccceeccceeeeEEeeccCCceeeeecccceeEEE Q lcl|Aclame:pro 157 PVATPTSVTATSNNKGTDYTYRYVVTALDAEGKTESAPSSAGTCTNNLFTNGGANTIAWSASSGASRYNVYKEQGGLYGY 236 (681) Q Consensus 157 ~~~~~~~~t~t~~~~~~~~t~~~~v~a~~~~g~~~s~~s~~~t~~~~~~~~~~~~~~~w~a~~~~~~~~v~~~~~~~~~~ 236 (681) + T Consensus 137 --------------------------------------g----------------------------------------- 137 (513) T protein:vir:88 137 --------------------------------------N----------------------------------------- 137 (513) T ss_pred --------------------------------------C----------------------------------------- Confidence 0 Q ss_pred eeccceeEEEeccccccccccccccccCccccCCceeEEEEEcCeEEEEecC----CCccEEEEEeccChhc----cccc Q lcl|Aclame:pro 237 IGQTTGTSLVDDNIAPDLSVTPPIYDAVFNAAGDYPAAVSYFEQRRCFAGTT----NKPQNIWMTRSGTESA----MSYS 308 (681) Q Consensus 237 ~~~~~~t~~~~~~~~~~~~~~~~~~~~~~s~~~g~p~~v~f~~~RL~~~~~~----~~p~~v~~S~~gd~~n----F~~~ 308 (681) ++ +.+ .-+.|.+|++||++++.. ..||.|+.|..+|... ++.. T Consensus 138 --------------~p----------~~~-----~a~~i~v~~~flv~~~~t~~~~~~PnrV~wS~~~D~~~~P~~W~~t 188 (513) T protein:vir:88 138 --------------FP----------ANT-----TFRRLKSFKNFLIGLNVTSNSIEMPQMVWWSTSADAGGVPASWDPT 188 (513) T ss_pred --------------CC----------ccc-----ceEEEEEEeeEEEEeecccCcCCCCceEEEecccCCcccccccccc Confidence 00 001 224577899999998754 4599999999999644 4333 Q ss_pred CCCcCCccEEEEEcCCCceEEEEEeec-CcEEEEecCcEEEEecCCCcccccceeEEEEeec-cCCcc-cccEEeCCeEE Q lcl|Aclame:pro 309 LPVRDDDRVAFRVAAREANAIRHIVPL-TELLLLTSSGEWRVASVNSDAVTPTTISVRPQSY-VGATD-VQPVVVNNTTI 385 (681) Q Consensus 309 ~~~~D~D~i~~~~~~~~~~~i~~~~~~-~~Llv~t~~~e~~~~~~~~~~ltP~~~~~~~~s~-~g~~~-~~Pv~vg~~v~ 385 (681) ..+.+++=.++ .+....|...++. ..|+||++++.|.++..++ |...++++... .||.. -.=+.+|+.++ T Consensus 189 ~~t~~a~~~~l---~d~~g~~v~g~~~g~~liif~e~~i~~m~y~g~----~~if~~~~i~~~~G~~~p~SI~~~~~~~f 261 (513) T protein:vir:88 189 DPTKDAGQNTL---ADTNGAIVDGVKLRDSFIIYKEDSVYSMRYIGG----LYIFQFQQLFNDVGILGPNCAIEFDGNHF 261 (513) T ss_pred cccCccccccc---CCCccceeeeeecccceEEEecccEEEEEecCC----CceEEEEeecccccccCCceeEEECCeEE Confidence 23333332333 2333445555555 4699999999999985322 33567777765 68854 45678999999 Q ss_pred EEEcCCCEEEEEEEeeeccceeccchhhhhHH-hcCCC---C--EEEEEEecCCCEEEEEEcCCC-e-----EEEEEEec Q lcl|Aclame:pro 386 YGAARGGHVRELAYNWQANGFVTGDLSLRAAH-LFDNL---D--ILDMAYAKAPQPIVWFISSSG-K-----LLGLTYVP 453 (681) Q Consensus 386 fv~~~g~~vre~~~~~~~~~~~~~dlt~~~~h-l~~~~---~--~~~~~~~~~p~~~~~~~~~dg-~-----l~~~ty~~ 453 (681) |+++.| ++.+ +..+-...+.+ .++. ++... . ....+.-.....+.|+-..-+ . ..++.|+- T Consensus 262 fls~~G--f~~~--~G~~~~~Ig~e---kVdk~f~~~~n~~~~~~~~~~~d~~~~~v~~~y~s~~~~~~~~~~~~lVYd~ 334 (513) T protein:vir:88 262 VVGHGD--VYVH--NGVQKQSVIDA---QVRKFFFSDINPDNYQRTFVLADHVNTEMWVCYSSTRSEPGKHCDRAIIWNW 334 (513) T ss_pred EEeCCc--eEEe--cCceeeecccc---hhhhhhhccCCcccceEEEEEEcCcccEEEEEecCCCCCCCcccceEEEEEc Confidence 999987 6533 22221111111 1111 11111 1 122233233334445533211 1 12233433 Q ss_pred ccceEEEEEeccCCceEEEEEEeeCCCCEEEEEEEECCCCceEEEEeeccCccccccccceEeecceeeccCcceeeccC Q lcl|Aclame:pro 454 EQQIGAWHQHDTDGVFESCAVVAEGNEDRLYAVVRRTIGGNEVRYVERMASRQFDAQADAFFVDSGLTYSGEPVSHISGL 533 (681) Q Consensus 454 ~q~v~aW~~w~~~g~~~~v~~~~~~~~d~l~~~v~r~~~g~~~~~ie~~~~~~~~~~~~~~~lD~~~~y~~~~~~~~~gl 533 (681) ..+ .|+..+.+..+-.+-..+. .+.........+. .+..... ++.+.+ ++.+.. | T Consensus 335 ~~~--~Ws~~~~p~~~~g~~g~~~----~~~~~~~~~~~~~------------~d~~~~~--~~~~~~-~~~~~s----l 389 (513) T protein:vir:88 335 KEN--TWSIRDLPNVLSGAYGIID----PKTSNLWDDDSNP------------WDTDTSV--WGEGSY-NPAKSS----M 389 (513) T ss_pred cCC--eEEEEeccchhhccccccc----ccccceecccccc------------cccchhh--hhcccc-ccccce----e Confidence 333 5665554443211111110 0111111100000 0000000 000000 000000 0 Q ss_pred CccCCcEEEEEeCCeeeccEeecCCEEEeCCCCCeEEEeeecceeEEecceEecCCCcccccceeEEEEEEEEEeccccE Q lcl|Aclame:pro 534 EHLEGKTVSILADGAVHPQRVVTDGAIDLDVEAGTVHIGLPITAELQTLPVAMQLDGSFGQGRVKNINKLWLRVHRSSGI 613 (681) Q Consensus 534 ~~l~G~~v~v~adG~~~~~~~v~~g~i~l~~~~~~v~vG~~y~~~v~~~p~~~~~~~~~~~~~~~~i~rv~l~~~~S~~~ 613 (681) .....++|.++. ++. ..-..|-++++.++...+.++.. ...++|.++..++..++.+ T Consensus 390 ------~~~~~~~~~~~~----------fd~--~~~f~G~~lea~~~t~~~~~~~~-----~~~~~i~~v~~~~t~~g~~ 446 (513) T protein:vir:88 390 ------IFTSFQDAKLFL----------FGE--TSTFSGQSFTSTLERSDIYLGDD-----RMMKTVSAVIPHITGNGVC 446 (513) T ss_pred ------EeeeccCCceee----------ecc--cccccCCceEEEEEecCccccCc-----hhheeeeeeeeeeecceEE Confidence 000112222210 111 11257788999999888876422 3446777777766665554 Q ss_pred EEecCCCe--eEEeeeecccccCCcCCcccceEEEEecCCcCcceEEEEEECCccCEEEEEEEEEEEEc-C Q lcl|Aclame:pro 614 FAGPHADA--LTEVKQRTSEPYGSPPALKSEEIPLVLSPKWGDSGQLFVRQADPLPLMIVSMSAEIAIG-A 681 (681) Q Consensus 614 ~v~~~~~~--~~~~~~~~~~~~~~~~~~~tG~~~v~~~~~~~~~~~v~I~~~~P~P~tvlai~~ev~vg-~ 681 (681) .+...... ...........+ +.-.+|.+++... .+-.+++|+...--|+++.++++|+..+ | T Consensus 447 t~~vg~~~~~~~~~~~s~~~~~---~~~~~~~~~~r~~---gRy~~~ri~i~~~~~w~~~G~~ve~~~~~g 511 (513) T protein:vir:88 447 NIWVGNAQVQGSGIRWKGPYPY---RIGQDYKIDTKHV---GRYIALKFDFASAGDWYFNGYTLEMAPKAG 511 (513) T ss_pred EEEEeeeccCccccccccceee---ecccCceEEeccC---CceEEEEEEccCCCceEEeeEEEEEecCCC Confidence 43322111 111111000000 0012344444432 4667788888888899999999999996 6 No 30 >protein:vir:94602 Length: 1012 # NCBI annotation: PfWMP4_35 # Family: family:all:12083 # MgeID: mge:1525 # MgeName: Pf-WMP4 # Cross-refs: genbank:acc:YP_762665;genbank:gi:115304373;genbank:GeneID:5142302 Probab=99.36 E-value=5.3e-11 Score=76.91 Aligned_cols=622 Identities=16% Similarity=0.178 Sum_probs=251.5 Q ss_pred CCc---------ceEeecccccccccchhcccchHHHHHHHHhhhhccEEeeccCeeeCCchheeeecCCCcCceEEEEE Q lcl|Aclame:pro 1 MSN---------VRVLQRSFGGGEISPEMFGRIDDVKYQSGLAICRNFVVKPQGPAENRAGFAFVREVKDSAKKVRLIPF 71 (681) Q Consensus 1 M~~---------~~~~q~~f~~GElsP~l~~R~D~~~y~~~~~~~~N~~~~~~Gg~~rRpG~~~v~~~~~~~~~~rlipf 71 (681) |.- .++.|-.|+ ----..|--|-+.+.|.--.-.-.+ .+ ...-+.|||.- T Consensus 213 ls~~~V~~qtytltirqi~W~----------WWAESm~~~G~~~~~~~SRFNV~~~---------DQ--~V~IP~~L~tD 271 (1012) T protein:vir:94 213 LSGSFVVGQTYTLTIRQITWQ----------WWAESMYYEGQDMMQNTSRFNVTSI---------DQ--NVKIPDRLITD 271 (1012) T ss_pred EEEEEecCcccceeehhhhhh----------hhhhhHhhhhhHHHhhhhhcccccc---------cc--cccchhHHhhh Confidence 110 011111111 0011122222222222110000000 00 00001111100 Q ss_pred ---EeCCCCeE-EEEEcCCEEEEEeCCcEEeeCCEEEEE----------eCCCCchhhceee----EEEeccEEEEEcCC Q lcl|Aclame:pro 72 ---TYSVTQTM-VIELGAGYFRFHTNGGTLLDGAVPYEI----------ANPYAEADLFNIH----YVQSADVLTLVHPN 133 (681) Q Consensus 72 ---~~~~~~~y-~lefg~~~irv~~~~~~v~~~~~~~~i----------~TPy~~a~l~~l~----~~qsaD~l~lvh~~ 133 (681) +..+.|.| |+.|-.. | |++.+...+.+.|..- -||=+-..-..|+ |+--+|+ +--.| T Consensus 272 iD~v~~~~~~~~l~~~~ss--~-F~~~~~~~~T~~P~~AD~YG~~~G~~~tpp~~~~~A~L~~aPFF~TFG~~-~s~TP- 346 (1012) T protein:vir:94 272 IDPVYKNSQGLGLFVFWSS--R-FDSNGWAGPTTSPNTADEYGFSGGGRFTPPSLVPGATLQAAPFFITFGGI-YSGTP- 346 (1012) T ss_pred hhhhhhccCCccEEEEEee--e-ecCceeecCCCCCCCcccccccCCceeccccccccceeeccceEEEeccc-cCCCC- Confidence 01111111 1111100 0 0011110010110000 0000000000000 0111111 00000 Q ss_pred cce--------EEEEECCCC-----cEEE----EEEeeccCcccccccceeeecCcceeeEEEEEEEEEeccceEEecCc Q lcl|Aclame:pro 134 YAP--------RELRRLGAT-----NWQL----ATIAFTSPVATPTSVTATSNNKGTDYTYRYVVTALDAEGKTESAPSS 196 (681) Q Consensus 134 ~~p--------~~l~R~~~~-----~W~~----~~~~f~~~~~~~~~~t~t~~~~~~~~t~~~~v~a~~~~g~~~s~~s~ 196 (681) .|| ++|+-++.+ +-+. .+...+..|+.|.|....++ ...+.+..-. +-+. T Consensus 347 ~P~~~V~iLR~RELRFN~G~GA~~~~L~V~~D~~~~t~Nnvpfspsnfqt~at----------T~~~T~R~~~---L~~A 413 (1012) T protein:vir:94 347 TPINQVNILRLRELRFNGGTGAKPDDLQVYNDTVEHTWNNVPFSPSNFQTWAT----------TYTATDRVIT---LMSA 413 (1012) T ss_pred CChhheeeeeeeeeeeccCCCCCCcceEEEEcceeeeccccccCcccccceee----------eeeecceeEE---Eeee Confidence 011 111111110 1111 11223333444433221111 1111111111 1111 Q ss_pred ccceeccc-e--eccceeeeEEee---ccCCceeeeecccceeEEEeeccceeEEEeccccccccccccccccCccccCC Q lcl|Aclame:pro 197 AGTCTNNL-F--TNGGANTIAWSA---SSGASRYNVYKEQGGLYGYIGQTTGTSLVDDNIAPDLSVTPPIYDAVFNAAGD 270 (681) Q Consensus 197 ~~t~~~~~-~--~~~~~~~~~w~a---~~~~~~~~v~~~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~s~~~g 270 (681) .++..++. | ..+.++..-..+ ...-....+.+....+|.-.-+++ .+.++........- -.|.+ -..+. T Consensus 414 ~G~~~~~A~Y~A~~GATnnlpanaPL~IS~~sA~s~~~~~R~v~~~~~~T~-~~~~~G~Y~r~YGi-G~~~~---Y~~~~ 488 (1012) T protein:vir:94 414 VGDRFNNANYFAILGATNNLPANAPLHISCLSASSYLGGSRRVWYRNLPTT-GGTLDGCYVRAYGI-GKYVD---YSKRS 488 (1012) T ss_pred ccccccCcceEEEeecccccccCCccccccccceeeeccceeeeeeccccC-CceEeeeEEEEEEe-eeeee---cCCcc Confidence 11111110 0 000000000000 000000001111111111111111 11111111110000 01211 24677 Q ss_pred ceeEEEEEcCeEEEEecCCCccEEEEEeccC------hhcccccC---CCcCCccEEEEEcCCCceEEEEEeec-CcEEE Q lcl|Aclame:pro 271 YPAAVSYFEQRRCFAGTTNKPQNIWMTRSGT------ESAMSYSL---PVRDDDRVAFRVAAREANAIRHIVPL-TELLL 340 (681) Q Consensus 271 ~p~~v~f~~~RL~~~~~~~~p~~v~~S~~gd------~~nF~~~~---~~~D~D~i~~~~~~~~~~~i~~~~~~-~~Llv 340 (681) +|+-.+.||+||++.+..+.|..+.+|.+|| ++||+.-+ .-.|+||+++.++|.-...|..++.- +.|++ T Consensus 489 F~~I~TiY~~RLiL~~~s~~~~~~~~S~~GD~~~~G~~Y~F~QiTD~L~G~~tDPF~L~VtSe~~e~iT~~~~WQ~~LFV 568 (1012) T protein:vir:94 489 FHAIGTIYRDRLILVNPSTATDQLLISEIGDATVPGEFYQFMQITDMLQGVTTDPFTLNVTSEGRERITAVTGWQKRLFV 568 (1012) T ss_pred ccceeeeeeeeeEEeccCCCcceEEEeecCCcccCceeeeeeeeehhhccCcCCceeEEEcccccceeeeeeeeceeEEE Confidence 8999999999999999999999999999887 88887532 12389999999999667778888885 57999 Q ss_pred EecCcEEEEecCCCcccccceeEEEEeeccCC-cccccEEeCCeEEEEEcCCCEEEEEEEeeeccceeccchhhhhHHhc Q lcl|Aclame:pro 341 LTSSGEWRVASVNSDAVTPTTISVRPQSYVGA-TDVQPVVVNNTTIYGAARGGHVRELAYNWQANGFVTGDLSLRAAHLF 419 (681) Q Consensus 341 ~t~~~e~~~~~~~~~~ltP~~~~~~~~s~~g~-~~~~Pv~vg~~v~fv~~~g~~vre~~~~~~~~~~~~~dlt~~~~hl~ 419 (681) ||..+.|.+.|+ +.++|..-.++.+|++|. +.---|+..-.++|..+.| ++++...-+.|.|.+.|-|+....+| T Consensus 569 ~T~~~T~~~~GG--e~~~~s~~~VN~vSt~G~~N~~~VV~T~~~V~Ym~~~G--~F~L~~k~~~~~Y~A~ErSvKIR~~F 644 (1012) T protein:vir:94 569 FTGSNTYSIEGG--EQFGESSYAVNLVSTYGAFNQNCVVVTNLTVLYMNKFG--LFDLMNKPNTDSYGAFERSVKIRGLF 644 (1012) T ss_pred EeccceEeeccc--cccchhHHHHHhHHhhcccCcceEEEeeeEEEEeeccc--eeeccCCccCCcchhhhhhhhhhhhh Confidence 999999999884 469999999999999997 5566778899999999977 99999999999999999999999998 Q ss_pred CCC------CEEEEEEecCCCEEEEEEcCC---CeEEEEEEecccceEEEEEeccCCceEEEEEEeeCCCCEEEEEEEEC Q lcl|Aclame:pro 420 DNL------DILDMAYAKAPQPIVWFISSS---GKLLGLTYVPEQQIGAWHQHDTDGVFESCAVVAEGNEDRLYAVVRRT 490 (681) Q Consensus 420 ~~~------~~~~~~~~~~p~~~~~~~~~d---g~l~~~ty~~~q~v~aW~~w~~~g~~~~v~~~~~~~~d~l~~~v~r~ 490 (681) .+- ....|.|.++ ..++++.+.. -+...-.|.-.---.+|+..+..|.|+-.-.+.-...|. |++.-. T Consensus 645 ~~~~~ss~~~~~Wl~~~e~-~~~LYi~L~~~~dT~~~S~~~~~N~~~DSWs~~~s~~~Fq~YP~V~~~~~~t-~L~~i~- 721 (1012) T protein:vir:94 645 QNLAGSSGDNLHWLRYNES-SNKLYIGLAAEGDTRTTSRNLMLNFTWDSWSTLSSAAPFQMYPAVQLFKYMT-WLTNIN- 721 (1012) T ss_pred hhhccccccceeeeeeccC-CceEEEEecCCCcchhhhhhhhhhhhhcchhhhhccCCcccchhhhhhhhhh-hhhhhc- Confidence 752 1223334332 2233333221 111111111111123788888777664321110011110 111000 Q ss_pred CCCce--------EEEEeeccC------cccccc-------c--cc----------eEeecce---------eec----- Q lcl|Aclame:pro 491 IGGNE--------VRYVERMAS------RQFDAQ-------A--DA----------FFVDSGL---------TYS----- 523 (681) Q Consensus 491 ~~g~~--------~~~ie~~~~------~~~~~~-------~--~~----------~~lD~~~---------~y~----- 523 (681) -+-+ .+||..... +.+..- . .. .-+|-.+ +|+ T Consensus 722 -~~~TV~ML~~~~~~YiDFatirthiypF~~CaG~~~~~Vms~~~GIY~~~~P~tP~I~~~tit~ss~~~~k~Yq~~T~~ 800 (1012) T protein:vir:94 722 -APLTVAMLATEMPFYIDFATIRTHIYPFTFCAGQRDVSVMSDSRGIYNLPLPVTPGILDYTITASSKAGAKTYQRNTAS 800 (1012) T ss_pred -CchhhhhhhhccceeeeeehhcccccceeeeccceeeEEEecCCceEEecccccceeeeeEeeccchhhhheecccccc Confidence 0001 122222110 111100 0 00 0011111 111 Q ss_pred -cCcceee-----------ccC-CccCCcEEEEEe-CCee----eccEeecCCEEEeCC---------------CCCeEE Q lcl|Aclame:pro 524 -GEPVSHI-----------SGL-EHLEGKTVSILA-DGAV----HPQRVVTDGAIDLDV---------------EAGTVH 570 (681) Q Consensus 524 -~~~~~~~-----------~gl-~~l~G~~v~v~a-dG~~----~~~~~v~~g~i~l~~---------------~~~~v~ 570 (681) |+.+-++ .-| +..+|++++++. ||.. ++...+ ++...+++ ....++ T Consensus 801 ~GT~tLt~~~~~~~~~~~l~LL~~~~~~~~~a~V~~~~~~~~TT~~TV~~-N~~~~lQ~T~~~GS~L~~~~~LsqN~~~~ 879 (1012) T protein:vir:94 801 AGTETLTLRNPMMDYADTLELLGGNVNASQFAMVMSNGFEPYTTYPTVTY-NGVAPLQWTVTGGSGLNNRPILSQNNNCI 879 (1012) T ss_pred ccceeeeecChhhhcCcEEEEecCCCCccEEEEEeecccccccccceEEe-cceeeeeEEEecCCccccccccccCceEE Confidence 1100000 001 223567777664 3321 122222 22211111 134688 Q ss_pred EeeecceeEEecceEecCCCcccccceeEEEEEEEEEecc--ccEEEecCCCeeEE-eeee----cccccCC--cCCccc Q lcl|Aclame:pro 571 IGLPITAELQTLPVAMQLDGSFGQGRVKNINKLWLRVHRS--SGIFAGPHADALTE-VKQR----TSEPYGS--PPALKS 641 (681) Q Consensus 571 vG~~y~~~v~~~p~~~~~~~~~~~~~~~~i~rv~l~~~~S--~~~~v~~~~~~~~~-~~~~----~~~~~~~--~~~~~t 641 (681) +|.-|.+.+.-+-+.+ .+.++.||+.++.|.+.-+ ..++.+...+...- +... .-.++.+ .|.+++ T Consensus 880 ~G~~Y~S~Y~SP~F~L-----~SL~~LKr~K~~~L~~Dttvtsqlkynltsgfsqvsvlntawvavvsnynenivpavvs 954 (1012) T protein:vir:94 880 MGMIYPSVYASPIFDL-----ESLGRLKRLKKLHLQMDTTVTSQLKYNLTSGFSQVSVLNTAWVAVVSNYNENIVPAVVS 954 (1012) T ss_pred Eeecchhhhcchhhhh-----hhhhhhhheeeeeEEeeeeeeeeeeeehhcccceeeeecceeeeeeeccCccccceeee Confidence 9999999998777765 3456778888888776543 33444433221100 0000 0011111 111111 Q ss_pred ---c---------eEEEEecCCcCcceEEEEEECCccCEEEEEEEEEEEEcC Q lcl|Aclame:pro 642 ---E---------EIPLVLSPKWGDSGQLFVRQADPLPLMIVSMSAEIAIGA 681 (681) Q Consensus 642 ---G---------~~~v~~~~~~~~~~~v~I~~~~P~P~tvlai~~ev~vg~ 681 (681) | +.++|+. |+.-+-++.|.+-..-.|.+-+.+.++.--- T Consensus 955 yqvgnsyeirrvvelsiplq-gygcdyqfyiasvgaeafklaayefdiqpqr 1005 (1012) T protein:vir:94 955 YQVGNSYEIRRVVELSIPLQ-GYGCDYQFYIASVGAEAFKLAAYEFDIQPQR 1005 (1012) T ss_pred eecCCceeeeEEEEEeeccc-ccccceeEeeeeccccceeeeeeeeccccch Confidence 0 1233443 2444556666666555555555444333222 No 31 >protein:vir:3133 Length: 911 # NCBI annotation: hypothetical protein # Family: family:all:5234 # MgeID: mge:64 # MgeName: VpV262 # Cross-refs: genbank:acc:NP_640315;genbank:gi:21234408;genbank:GeneID:956056 Probab=99.26 E-value=2.7e-10 Score=73.05 Aligned_cols=628 Identities=15% Similarity=0.181 Sum_probs=258.8 Q ss_pred CCcceEeeccccc--ccccchhcccchHHHHHHH-HhhhhccEEeeccCeeeCCchh-------eeeecCCCcCceEEEE Q lcl|Aclame:pro 1 MSNVRVLQRSFGG--GEISPEMFGRIDDVKYQSG-LAICRNFVVKPQGPAENRAGFA-------FVREVKDSAKKVRLIP 70 (681) Q Consensus 1 M~~~~~~q~~f~~--GElsP~l~~R~D~~~y~~~-~~~~~N~~~~~~Gg~~rRpG~~-------~v~~~~~~~~~~rlip 70 (681) |+...-..+-|+- | --..-.|+.|.+- +...+||-+..+|=-.||-|+. |+......+++--|+. T Consensus 1 ~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (911) T protein:vir:31 1 MAARKGAVNRFTPVRG-----WVTEGNLANYGQDVALDVENMDIEKTGLTQRRFGLFAETSSEQFLSTFTATARARGLLA 75 (911) T ss_pred Ccccccccccccccee-----eeecCchhhcCceeEeeeccccchhcccchhheeeeeccchhhhhhhhhhhhhhcceee Confidence 8765555555541 1 1122456667544 4568999999999888998863 2222222222211221 Q ss_pred E-----EeCCCCeEEEEEcCCE-EEEEeCCcEEeeCCEEEEEeCCCCchhh-------ceeeEEEeccEEEEEcCCcceE Q lcl|Aclame:pro 71 F-----TYSVTQTMVIELGAGY-FRFHTNGGTLLDGAVPYEIANPYAEADL-------FNIHYVQSADVLTLVHPNYAPR 137 (681) Q Consensus 71 f-----~~~~~~~y~lefg~~~-irv~~~~~~v~~~~~~~~i~TPy~~a~l-------~~l~~~qsaD~l~lvh~~~~p~ 137 (681) - .....+--||.|-.+| +.+..+.+-+-......+|. ..++-+ .-++...--.--+|.+|...|- T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (911) T protein:vir:31 76 VKEWREAWGDKDVNMLIFHAGYKVHVVQDTAPLRDANILLTID--LLEAGIKLDGVIDSPVHISVGVGFAIITNPRIEPV 153 (911) T ss_pred hhhHHHhhCCCcceEEEEecCcEEEEEecccCccccceEEEee--eeccCceeeeeecCceeEEeeceEEEeecCccceE Confidence 1 1223344566665554 22222222111111111111 011100 0011111223345677777776 Q ss_pred EEEECCCCc-----EEEEEEeec-------cCcccccc--cceeeecCcceeeEEEEE-EEEEeccceEEecCcccceec Q lcl|Aclame:pro 138 ELRRLGATN-----WQLATIAFT-------SPVATPTS--VTATSNNKGTDYTYRYVV-TALDAEGKTESAPSSAGTCTN 202 (681) Q Consensus 138 ~l~R~~~~~-----W~~~~~~f~-------~~~~~~~~--~t~t~~~~~~~~t~~~~v-~a~~~~g~~~s~~s~~~t~~~ 202 (681) -|.-.+-++ -+.++..+- .+....+| .+.++......+...+.. +.... ..+.+++.-. T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~ 227 (911) T protein:vir:31 154 LIKLDDVDDEGVPTLSYEPLTLLIRTRELLTPYTTGTNYGDTLTPEEEWNLYNSGWATITRATK------DKSGSGTVYV 227 (911) T ss_pred EEEeeccCccCcccccccceeeEeeehhhccccccccccCcccCchhhcccccccceeeeeecc------cCCccceEEE Confidence 554222211 111111110 00011111 111111111111111110 00000 0011111100 Q ss_pred c---ceecc---------------ceeeeEEeeccCCce---eeee---------cccceeEEEeeccceeEEEeccccc Q lcl|Aclame:pro 203 N---LFTNG---------------GANTIAWSASSGASR---YNVY---------KEQGGLYGYIGQTTGTSLVDDNIAP 252 (681) Q Consensus 203 ~---~~~~~---------------~~~~~~w~a~~~~~~---~~v~---------~~~~~~~~~~~~~~~t~~~~~~~~~ 252 (681) + +|.+. +-+.-...+.....+ ..+. +-....+-+.+.+ -.+.-..++.| T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 306 (911) T protein:vir:31 228 NPVQYYFDKRGVYPSHSVLYNSMKQESAKEIVALNVFSPWADEKINFGTTTPPLGRYIHSAYYFDSAA-ILSLGIGNLTP 306 (911) T ss_pred chhheeecccCcCcchhhhhhhhhhhccceeEEEeeeccccccccccccCCCchhhhhhhheeeccce-eeeecccccCC Confidence 0 00000 000000000000000 0000 0000111111111 01111112222 Q ss_pred cccc------ccc---cccc--------------------CccccCCceeEEEEEcCeEEEEecCC-CccEEEEEeccC- Q lcl|Aclame:pro 253 DLSV------TPP---IYDA--------------------VFNAAGDYPAAVSYFEQRRCFAGTTN-KPQNIWMTRSGT- 301 (681) Q Consensus 253 ~~~~------~~~---~~~~--------------------~~s~~~g~p~~v~f~~~RL~~~~~~~-~p~~v~~S~~gd- 301 (681) .+.. ++. ..+| .|. +...|+|++||.+|++|++... ..++|.+|+.-+ T Consensus 307 ~~~~~~~~~~~p~~~e~~np~gl~~igt~~n~k~~a~~~~~~~-~~~r~r~~~~yaGRVfyaD~dkngk~rIlFSqLv~s 385 (911) T protein:vir:31 307 PTSDGTTEGSGPAEEEISNPIGLDNIGTVNNLKLIAEGTVRWT-VKDRPRCSGYHNGHVYFGDRDKNGKTRILVSQLVNS 385 (911) T ss_pred CCCCCccCCCCCchhhhcCCCCcccccchhceeeeeccceeee-ecccccceeeeccEEEEeeeccCcceeEEEEeeccc Confidence 1111 000 0111 121 3456999999999999996532 235899998433 Q ss_pred -------hhcccccC----CCcCCccEEEEEcCCCceEEEEEeecC-cEEEEecCcEEEEecCCCcccccceeEEEEeec Q lcl|Aclame:pro 302 -------ESAMSYSL----PVRDDDRVAFRVAAREANAIRHIVPLT-ELLLLTSSGEWRVASVNSDAVTPTTISVRPQSY 369 (681) Q Consensus 302 -------~~nF~~~~----~~~D~D~i~~~~~~~~~~~i~~~~~~~-~Llv~t~~~e~~~~~~~~~~ltP~~~~~~~~s~ 369 (681) |++=++.+ .+-|+|...+.+... ..|+.++.++ .|+||+.++.|+|.|.+....|.++..|.+++. T Consensus 386 l~di~nCYQdaDPTSeee~DLIdTDGg~vri~ga--h~Ii~LV~~G~sLlVFcaNGVWAI~G~d~~g~TATdy~ItKIsd 463 (911) T protein:vir:31 386 LDNIPKCFQDADPTAEEINDLIATDGFTMYPVGM--GAPITMVEFNKRLLLLCTNGVWAIRGTSGGGATATDFTLDKVAS 463 (911) T ss_pred cccccccccCCCccccccchhhhcCCcEEecCCC--CCceEEEEecCeEEEEEeCcEEEEeccCCCceeeeeeEEEEEee Confidence 44444433 234789988888665 4588898885 699999999999999877899999999999999 Q ss_pred cCCcc-cccEEeCCeEEEEEcCCCEEEEEEEeeeccceeccchh-hhhHHhcCCC---CE--EEEEEecCCCEEEEEEcC Q lcl|Aclame:pro 370 VGATD-VQPVVVNNTTIYGAARGGHVRELAYNWQANGFVTGDLS-LRAAHLFDNL---DI--LDMAYAKAPQPIVWFISS 442 (681) Q Consensus 370 ~g~~~-~~Pv~vg~~v~fv~~~g~~vre~~~~~~~~~~~~~dlt-~~~~hl~~~~---~~--~~~~~~~~p~~~~~~~~~ 442 (681) .||++ =.-|++|+.++|+++.| |+.+.-.+ -..+.++.+| .....+.+.. .+ +.-.|......+.|+..+ T Consensus 464 vGcsspNSVVvVgn~i~fWSd~G--IyaLganq-fnD~tAnNLTesTIQ~y~d~I~~dkIkNVtgtyd~de~rVyW~yPn 540 (911) T protein:vir:31 464 VEFNSPQSVVDIGTAIVFWSERG--IIAIGVND-FGDLTSNNLTENTIDEYYDSLDRDIIKNVKGTFINDENRVYWVVPN 540 (911) T ss_pred eeeCCCCeEEEecCceEEeeCCc--EEEEeecc-cCccccccccHHHHHHHHhhcChhhhceEEEEEEccCCEEEEEecC Confidence 99975 46788999999999988 88887665 4568899998 4455555433 12 234466667789999874 Q ss_pred --CC-eEEEEE----EecccceEEEEEeccCC-ceE--------------EE-------EEEee---------------C Q lcl|Aclame:pro 443 --SG-KLLGLT----YVPEQQIGAWHQHDTDG-VFE--------------SC-------AVVAE---------------G 478 (681) Q Consensus 443 --dg-~l~~~t----y~~~q~v~aW~~w~~~g-~~~--------------~v-------~~~~~---------------~ 478 (681) |+ +.+.+- +.=+-...+|.+|+..+ .+. ++ +.|-+ + T Consensus 541 ~lDe~teykt~~~~ILVfdLatgaFYPwtvs~gpLl~~p~y~Lv~TreEvtvPi~~etgaiIve~gsdPV~~tl~vdttG 620 (911) T protein:vir:31 541 KQDSNGEYKTDGELVLVLNLDTGGFYKHTVSGGPLLHAPFRRLVNTRAEVSIPITETDGTVITDTLGDPVTVTRTVTTTG 620 (911) T ss_pred ccCCccceeecCceEEEEEeccCcccceeeecceeecccccccccccccceeeEEeecceEEEecCCCCeEEEEeeeccc Confidence 43 333311 11123345899997643 221 00 00000 1 Q ss_pred CCCEEEEE-EEECCCCceEEEEeeccCccccc---------cccceEeecceeeccCcceeeccCCccCCcEEEEEeCCe Q lcl|Aclame:pro 479 NEDRLYAV-VRRTIGGNEVRYVERMASRQFDA---------QADAFFVDSGLTYSGEPVSHISGLEHLEGKTVSILADGA 548 (681) Q Consensus 479 ~~d~l~~~-v~r~~~g~~~~~ie~~~~~~~~~---------~~~~~~lD~~~~y~~~~~~~~~gl~~l~G~~v~v~adG~ 548 (681) .+...|++ +|...+|+..-..|. .+..+.+ ....-|+|.+-.|.+.-.. .-+++...- . -+ T Consensus 621 vDg~ayLl~frdg~~g~~~f~a~~-~~~~~~dw~~~~~~~~~~y~s~~~~~y~~~~~~~~-~~~~pyi~s--y-~~---- 691 (911) T protein:vir:31 621 VDGLAYFASFDDGVNGQFNFIAEH-QPWGFADWANVPNMTRVNYSSYVDFAYEYPEVMIG-NISLPYIHS--Y-YL---- 691 (911) T ss_pred ccceeEEEeeccCCcceEEEEEee-cCCeeeccccCccccccchhHHHHhhhhhhhhhhh-cccCceeee--e-ee---- Confidence 12334444 222233333221221 1111100 0111123333333222111 111111000 0 00 Q ss_pred eeccEee-cCCEEEeCCCCCeEEEeeecc----------eeEEecceEecCCCcccccceeEEEEEEEEEeccccEEEec Q lcl|Aclame:pro 549 VHPQRVV-TDGAIDLDVEAGTVHIGLPIT----------AELQTLPVAMQLDGSFGQGRVKNINKLWLRVHRSSGIFAGP 617 (681) Q Consensus 549 ~~~~~~v-~~g~i~l~~~~~~v~vG~~y~----------~~v~~~p~~~~~~~~~~~~~~~~i~rv~l~~~~S~~~~v~~ 617 (681) ....| +++.++- -.|+.|. -.+++....+....| -..|+--.=.+.++-.+.+.. T Consensus 692 --~~~rv~~~~y~~~-------~a~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~vVN 757 (911) T protein:vir:31 692 --TGIRVQTEQYTTE-------TAHLSFHRVQAHQTTALGTVTFHKVDMMVSTG-----MQVISFHKDDLLRTEAVTLVN 757 (911) T ss_pred --eeeEEeccceeee-------cccceeEeeecccceeeeeeeeeeeeehhhcc-----ceeeeeccccceeeeeeEEEc Confidence 00000 0111000 0111110 011111111111100 000000001122222222211 Q ss_pred CCCee-----EEeeeecccccCCcCCcccceEEEEecCCcCcceEEEEEECCccCEEEEEEEEEEEEcC Q lcl|Aclame:pro 618 HADAL-----TEVKQRTSEPYGSPPALKSEEIPLVLSPKWGDSGQLFVRQADPLPLMIVSMSAEIAIGA 681 (681) Q Consensus 618 ~~~~~-----~~~~~~~~~~~~~~~~~~tG~~~v~~~~~~~~~~~v~I~~~~P~P~tvlai~~ev~vg~ 681 (681) .+... +.+ ....-.+..+.|+..|.+-+... ..++-.+.|+-- -+-..+|+-|+ T Consensus 758 GDAE~GtmTGWtv-taG~~d~~Ta~p~~rGSyfFa~~----nn~n~aL~QDID-----SagaaaIDAG~ 816 (911) T protein:vir:31 758 PDAETGDATGWTV-TAGTLDVRTAAPLYQGSYYFWSD----SNANFAAYQDID-----PVGGGYITAGE 816 (911) T ss_pred CCCCCCCCCccee-eccchhhccCCchhcceEeEcCC----CCcchhhheecc-----ccccceeeecc Confidence 11111 111 00111233455678887766522 234444444443 33445666666 No 32 >protein:vir:105563 Length: 396 # NCBI annotation: hypothetical protein # Family: family:all:27455 # MgeID: mge:1540 # MgeName: F116 # Cross-refs: genbank:acc:YP_164316;genbank:gi:56692963;genbank:GeneID:3197174 Probab=98.13 E-value=4e-06 Score=50.18 Aligned_cols=369 Identities=12% Similarity=0.034 Sum_probs=163.8 Q ss_pred CCcceEe---ecccccccccchhcccchHHHHHHHHhhhhccEEeeccCeeeCCchheeeecCCCcCceEEEEEEeCCCC Q lcl|Aclame:pro 1 MSNVRVL---QRSFGGGEISPEMFGRIDDVKYQSGLAICRNFVVKPQGPAENRAGFAFVREVKDSAKKVRLIPFTYSVTQ 77 (681) Q Consensus 1 M~~~~~~---q~~f~~GElsP~l~~R~D~~~y~~~~~~~~N~~~~~~Gg~~rRpG~~~v~~~~~~~~~~rlipf~~~~~~ 77 (681) |+...++ =-|--++|- .-..|-+.=..-+|.+.|+=+.+.|=+.||-|.+-+.. .+|-|+--+.-. T Consensus 1 ~~~~~~~~~~ginnv~~e~----~l~~~~~~~~~~~r~a~nvdi~~~G~~~~r~~~tr~~~-------g~l~~~~~~~~~ 69 (396) T protein:vir:10 1 MATTSLVPLAGINNVAEDA----ALQRGGESPRLYVRDAVNIDLSPAGKAQLRASVRQVTD-------QPFRQLWQSPLH 69 (396) T ss_pred Ccceeeeeeeccccccccc----ccccCCCcccceeeeeeeecccCCCchhhhccCcccCC-------ceecccccCccc Confidence 8876543 112233432 11111112233578899999999999999999886543 234443333333 Q ss_pred eEEEEEcCCEEEEEeCCcEEeeCCEEEEEeCCCCchhhceeeEEEeccEEEEEcCCcceEEEEECCCCcEEEEEEeeccC Q lcl|Aclame:pro 78 TMVIELGAGYFRFHTNGGTLLDGAVPYEIANPYAEADLFNIHYVQSADVLTLVHPNYAPRELRRLGATNWQLATIAFTSP 157 (681) Q Consensus 78 ~y~lefg~~~irv~~~~~~v~~~~~~~~i~TPy~~a~l~~l~~~qsaD~l~lvh~~~~p~~l~R~~~~~W~~~~~~f~~~ 157 (681) .+.|-.-.+.+--+.++.- +.. |.-..-..-+.+.+..|.+|.+....+-.. .+.+...+.. +. T Consensus 70 ~~~~~~~~~tl~~~~~~~w--------~~~-~~v~v~~~pva~d~~~~Rvy~t~~~~p~~~---~~~~~y~L~v----p~ 133 (396) T protein:vir:10 70 GDAFGALGDQWGKVDPHSW--------TFE-PLAQIGEGDLSHEVLNNRVCVAGTAGIFTY---DGAQAERLTL----DT 133 (396) T ss_pred cceeeeCCceEEEEeCCeE--------EEE-eeeeeccCchhccccCCeEEEEcCCCceee---eCCcceecCc----CC Confidence 3333322222222222210 000 111111223344556689999885544322 2333333221 11 Q ss_pred cccccccceeeecCcceeeEEEEEEEEEeccceEEecCcccceeccceeccceeeeEEeeccC--Cceeeeeccccee-- Q lcl|Aclame:pro 158 VATPTSVTATSNNKGTDYTYRYVVTALDAEGKTESAPSSAGTCTNNLFTNGGANTIAWSASSG--ASRYNVYKEQGGL-- 233 (681) Q Consensus 158 ~~~~~~~t~t~~~~~~~~t~~~~v~a~~~~g~~~s~~s~~~t~~~~~~~~~~~~~~~w~a~~~--~~~~~v~~~~~~~-- 233 (681) |..+.... ..++...-++.|..+-++..+ +++.++....... .+...+.+...+.+ ..+.++|+..... T Consensus 134 P~~a~~~a--~~Gsl~~~~~~Y~~t~V~~~g-EEs~p~~~S~~v~----~~gg~~vtl~~~~~~~i~~~RiYrS~~~G~~ 206 (396) T protein:vir:10 134 PAPPLLVA--GAGSLSQGTYGAAVAWLRGPQ-ESAPSLIAFAEVT----DAGALEVTFPLCLDASVTGARLYLTRANGGE 206 (396) T ss_pred Cccccccc--ccCccCCceEEEEEEEEecCC-CcCcccccccccC----CCCCcEEEEEcccCCCcceEEEEEeCCChhh Confidence 22222221 122222234445555554443 3443333222111 22222333333333 2355666543221 Q ss_pred EEEeecc--ceeEEEeccccccccccccccccCccccCCc--ee--EEEEEcCeEEEEecCCCccEEEEEeccChhcccc Q lcl|Aclame:pro 234 YGYIGQT--TGTSLVDDNIAPDLSVTPPIYDAVFNAAGDY--PA--AVSYFEQRRCFAGTTNKPQNIWMTRSGTESAMSY 307 (681) Q Consensus 234 ~~~~~~~--~~t~~~~~~~~~~~~~~~~~~~~~~s~~~g~--p~--~v~f~~~RL~~~~~~~~p~~v~~S~~gd~~nF~~ 307 (681) +-++..- ...+++ ..+.+|..++-.-.+=+ |. .+++|.+|++++.+ +.||||+..-+.=++. T Consensus 207 ~~l~aE~~a~~~s~v--------lPs~~w~gpP~~~~gL~pmP~G~~~A~faGRi~~A~G----n~V~FSEp~~Ph~~~~ 274 (396) T protein:vir:10 207 LLLAGDYPLGAATVI--------LPTLPELGRPAQFRHLSPMPTGKHLAYWRGRLLIARA----NVLRFSEALAYHLHDE 274 (396) T ss_pred hhheehhccceeeee--------eecCCCCCCCccccccccCchhHhhhhhcceEEEEeC----CEEEEecCCCCceecc Confidence 1111111 111111 12233433322211111 22 47999999999988 5799999976532211 Q ss_pred cCCCcCCccEEEEEcCCCceEEEEEeec-CcEEEEecCcEEEEecCCCcccccceeEEEEeecc----CCc--------c Q lcl|Aclame:pro 308 SLPVRDDDRVAFRVAAREANAIRHIVPL-TELLLLTSSGEWRVASVNSDAVTPTTISVRPQSYV----GAT--------D 374 (681) Q Consensus 308 ~~~~~D~D~i~~~~~~~~~~~i~~~~~~-~~Llv~t~~~e~~~~~~~~~~ltP~~~~~~~~s~~----g~~--------~ 374 (681) . ..+ .... ..|..+.+. .+|+|+|.++-|.+.|.+ |++.+..+.... ++. . T Consensus 275 ~--------~~~-~~~~--~~Iv~lapv~~gL~Vgt~~~~y~~~G~d-----P~sms~~~l~~~~pvp~S~v~~p~~~~s 338 (396) T protein:vir:10 275 R--------YGF-VQMP--QRITFVQPVDGGIWVGQVDHVAFLDGAD-----PASLSVSRRASRAPVPGSAVLVPAEVVG 338 (396) T ss_pred h--------hcc-CCCC--CceEEEEEecCeEEEEEcCcEEEEEcCC-----hhHcceeecccCCCcccchhcccchhhh Confidence 0 000 1111 236667776 579999999999999854 444444444321 111 1 Q ss_pred -cccEEeCCeEEEEEcCCCEEEEEEEeeeccceeccchhhhhHHhcCCCCEEEEEEecCCCEEEEEEc Q lcl|Aclame:pro 375 -VQPVVVNNTTIYGAARGGHVRELAYNWQANGFVTGDLSLRAAHLFDNLDILDMAYAKAPQPIVWFIS 441 (681) Q Consensus 375 -~~Pv~vg~~v~fv~~~g~~vre~~~~~~~~~~~~~dlt~~~~hl~~~~~~~~~~~~~~p~~~~~~~~ 441 (681) -..+..+..++|.++.| +.-..-+... ..+....+.......-.|-....+++.+.+ T Consensus 339 ~rs~~~~~~~~lwas~dG--l~~g~~~G~v--------~~l~~~~i~p~~~~A~~~~~~drRy~~~~~ 396 (396) T protein:vir:10 339 TNASPDGSPVAVWLAENG--YVMGTSSGAI--------AEVHAGVLAGITGRAGTSVVFDRRLLTAVS 396 (396) T ss_pred cccccccCcEEEEccCCc--EEEEcCCcee--------eeecccccCCCcccceEEEeecCeEEEEeC Confidence 12345688999999988 3322111111 111122332211122222223444444443 No 33 >protein:vir:93631 Length: 580 # NCBI annotation: Bcep22gp67 # Family: family:all:1544 # MgeID: mge:1470 # MgeName: Bcep22 # Cross-refs: genbank:acc:NP_944296;genbank:gi:38640373;genbank:GeneID:2658280 Probab=93.30 E-value=0.008 Score=32.07 Aligned_cols=491 Identities=15% Similarity=0.153 Sum_probs=194.2 Q ss_pred cEEeeccCeeeCCchheeeecCCCcCceEEEEEEeCCCCeEEEEEcCCEEEEEeCCcEEeeCCEEE--EEeCC-CCc--- Q lcl|Aclame:pro 39 FVVKPQGPAENRAGFAFVREVKDSAKKVRLIPFTYSVTQTMVIELGAGYFRFHTNGGTLLDGAVPY--EIANP-YAE--- 112 (681) Q Consensus 39 ~~~~~~Gg~~rRpG~~~v~~~~~~~~~~rlipf~~~~~~~y~lefg~~~irv~~~~~~v~~~~~~~--~i~TP-y~~--- 112 (681) |-.. +=.+ |-++.. --..||+|=.. ..-+-=+-|.+|.|+-++.-..+++..... ...|= |.. T Consensus 1 M~~i------~i~~--f~Ge~P--rl~p~lLP~~~-a~~a~n~~~~~G~i~P~~~~~~~~~~~~i~~~~~~t~~~~~~~W 69 (580) T protein:vir:93 1 MTII------KITG--FSGEIP--RLVPRLLPDTA-AQNATNARLESGGLTPYRKPKFITRISTIPAGQIETIYRNGETW 69 (580) T ss_pred CeeE------eecc--cccccc--cchhhhccccc-cceEEeeeccCCeeeeeeCchhhccccccCcCcceEEEecCcee Confidence 1111 1111 111111 01134444211 122333446677777765543332221110 00111 110 Q ss_pred ----hhhceeeEEEeccEEEEEcCCcceEEEEECCCCcEEEEEEeeccCcccccccceee--ecCcceeeEEEEEEEEEe Q lcl|Aclame:pro 113 ----ADLFNIHYVQSADVLTLVHPNYAPRELRRLGATNWQLATIAFTSPVATPTSVTATS--NNKGTDYTYRYVVTALDA 186 (681) Q Consensus 113 ----a~l~~l~~~qsaD~l~lvh~~~~p~~l~R~~~~~W~~~~~~f~~~~~~~~~~t~t~--~~~~~~~t~~~~v~a~~~ 186 (681) .++..++.--..|++|.....+|=... ..+...+.. +.|.. ..+... ......-++.|..+-++. T Consensus 70 ~~w~~~V~~i~~PvA~DRvy~Td~g~Pkvt~---~g~sy~lgV----paPs~--Apt~~~~g~g~l~~~~y~Yv~TfVt~ 140 (580) T protein:vir:93 70 MAWDKPVYAAPGPVAADRLYVMGDGAPKMIV---GGTTYPLAV----PMPSA--ALTAATSGTGTGDVFSRVYVYTFVTG 140 (580) T ss_pred EEeCCceeeecCccccceeEEcCCcccceec---CCccccccC----CCccc--CceeeecCCCCcCccceEEEEEEEcC Confidence 122222221123677776555443221 222222111 11111 111111 122233455676666666 Q ss_pred ccceEEecCcccceeccceeccceeeeEEeecc----CCceeeeecccce----eEEEeec--cceeEEEecccccc--- Q lcl|Aclame:pro 187 EGKTESAPSSAGTCTNNLFTNGGANTIAWSASS----GASRYNVYKEQGG----LYGYIGQ--TTGTSLVDDNIAPD--- 253 (681) Q Consensus 187 ~g~~~s~~s~~~t~~~~~~~~~~~~~~~w~a~~----~~~~~~v~~~~~~----~~~~~~~--~~~t~~~~~~~~~~--- 253 (681) .| .|+.++.......- ..++..+..-.+.. .....++|+...+ -+-++.. ....++.+..-... T Consensus 141 ~G-eES~PS~~S~~vtv--~~g~tVtLs~~p~p~~~~~i~~~RIYRS~tG~~gtdy~lVAel~Ag~~sF~Dd~s~a~Lge 217 (580) T protein:vir:93 141 FG-EESEPSAISNEVNW--QAGQTVTLSGFQAAPAGRNITKQRIYRSQTSLSGTDLYFIAERDASAANFVDNVPLSDQNE 217 (580) T ss_pred CC-CcCCCcccccceee--CCCCeEEEEecCCCCCCCccceEEEEEeccCCCceeEEEEeeeccceeeeeeccccccccc Confidence 65 34554432221111 12233333322221 2344678875544 3334432 22234444433222 Q ss_pred ccccccccccCccccCCceeEEEEEcCeEEEEecCCCccEEEEEeccChhcccccCC-CcCCccEEEEEcCCCceEEEEE Q lcl|Aclame:pro 254 LSVTPPIYDAVFNAAGDYPAAVSYFEQRRCFAGTTNKPQNIWMTRSGTESAMSYSLP-VRDDDRVAFRVAAREANAIRHI 332 (681) Q Consensus 254 ~~~~~~~~~~~~s~~~g~p~~v~f~~~RL~~~~~~~~p~~v~~S~~gd~~nF~~~~~-~~D~D~i~~~~~~~~~~~i~~~ 332 (681) .-.+..|..|+..-.+ -+.+-.+++.=..| +.||||+.--.+-+-.+-. .-|.| |-.+ T Consensus 218 ~Lps~~~~~PP~~m~g----L~~m~nGi~agF~G----nev~fsEpy~P~AWP~~yr~t~~~~-------------Ivai 276 (580) T protein:vir:93 218 PLPSLEWNAPPDDLTG----LISLPNGMMAAFRG----KELWLCEPWRPHAWPQKYVLTMDYN-------------IVAL 276 (580) T ss_pred ccchhhccCcCCCcce----EEeeccceEEEEeC----CEEEEecCCCCccchhhcCCCCCCC-------------ceeE Confidence 2335667776554332 24566664432222 6899999854444311111 11322 3444 Q ss_pred eec-CcEEEEecCcEEEEecCCCcccccceeEEEEe-eccCCcc-cccEEeCCeEEEEEcCCCEEEEEEEeeeccceecc Q lcl|Aclame:pro 333 VPL-TELLLLTSSGEWRVASVNSDAVTPTTISVRPQ-SYVGATD-VQPVVVNNTTIYGAARGGHVRELAYNWQANGFVTG 409 (681) Q Consensus 333 ~~~-~~Llv~t~~~e~~~~~~~~~~ltP~~~~~~~~-s~~g~~~-~~Pv~vg~~v~fv~~~g~~vre~~~~~~~~~~~~~ 409 (681) .+. ..|+|+|.+.-|+++|. +|.+++..+. ..--|-+ =..|.+|..++|.+..| +-.+.-+ + + T Consensus 277 a~~g~~LvV~T~g~pyl~~G~-----~P~~ms~~kL~~~q~CvS~rsiV~~~~~v~Yas~dG--Lv~i~~~----g--a- 342 (580) T protein:vir:93 277 GAYGTTIVVATDGQPYIVSGA-----SPDAMSQEKLELNLPCINARGLVDLGYAIAYPSHDG--LVVASSS----G--A- 342 (580) T ss_pred eeeCceEEEEEcCceEEEEcc-----ChhhccccccccccccccccceeecCceEEeecCCc--EEEEeCC----h--H- Confidence 555 47999999999999984 4444433222 2334643 35788999999999988 3222111 1 1 Q ss_pred chhhhhHHhcCCC------CEEEEEEecCCCEEEEEEcCC----CeEEEEEEecccceEEEEEeccCCceEEEEEEeeCC Q lcl|Aclame:pro 410 DLSLRAAHLFDNL------DILDMAYAKAPQPIVWFISSS----GKLLGLTYVPEQQIGAWHQHDTDGVFESCAVVAEGN 479 (681) Q Consensus 410 dlt~~~~hl~~~~------~~~~~~~~~~p~~~~~~~~~d----g~l~~~ty~~~q~v~aW~~w~~~g~~~~v~~~~~~~ 479 (681) =+..+.||.-. .-...+++-+-.-+.+....| +.--++.++..-+...|.|-++... |...+-. T Consensus 343 --~vvT~~l~t~~qW~~~~P~ti~a~~~eG~Y~a~Y~~~~~~~~~~~g~fi~d~~~~~~~~~~~~~~~d----~~~~d~~ 416 (580) T protein:vir:93 343 --RVVTDQLMTRNDWLKTAPGRFVSGQFFGRYLASYEYIDPAGTARRGSFIIDLTGQEAFLHRTNYKAD----ATFYDIT 416 (580) T ss_pred --HHHHhhccChhHHHhcCCceEEEEeecCeEEEEEcccccccccccceEEEecCCCcceeEEeccccc----eeeeecc Confidence 11122333210 011122222333333332222 1222233443222223666665432 3344445 Q ss_pred CCEEEEEEEECC----CCc-eEEEEeeccCcccccccc----ceEeecc------------------------------e Q lcl|Aclame:pro 480 EDRLYAVVRRTI----GGN-EVRYVERMASRQFDAQAD----AFFVDSG------------------------------L 520 (681) Q Consensus 480 ~d~l~~~v~r~~----~g~-~~~~ie~~~~~~~~~~~~----~~~lD~~------------------------------~ 520 (681) .|.||++-.+.+ .|+ ....+ +..+..|..... +.-+++. + T Consensus 417 ~d~Ly~~~~~~i~~~~~~~~~~~~~-~WrSK~f~~~~~~sf~~~rV~s~~~~~~~~~~a~~~~~~~~~a~n~~~~~~~~~ 495 (580) T protein:vir:93 417 EGKLYLCIGQDIYEWDALDSENEIL-VWRSKQYVVQKPTNFGVILIEGSVLMTPEEEAAEQAAIDAAKAHNDSIFGDASI 495 (580) T ss_pred CCeEEEEeCCEEEEEcCCCCCcceE-EEecceEEecCCcCceEEEEeeccccchhhhhhhhhhhhhhhhhhhhccccccc Confidence 788888764432 111 01100 001111110000 1112211 0 Q ss_pred e--eccCccee--ec-----cCCccCCcEEEEEeCCeeeccEeecCCEEEeCC--CCCeEEEeeecceeEEecceEecCC Q lcl|Aclame:pro 521 T--YSGEPVSH--IS-----GLEHLEGKTVSILADGAVHPQRVVTDGAIDLDV--EAGTVHIGLPITAELQTLPVAMQLD 589 (681) Q Consensus 521 ~--y~~~~~~~--~~-----gl~~l~G~~v~v~adG~~~~~~~v~~g~i~l~~--~~~~v~vG~~y~~~v~~~p~~~~~~ 589 (681) - -++.+... +. .++...--++.+++||.........+.-+.|+. .+..++|=+.=..+|+=--+. T Consensus 496 ~~~~~~~~v~~~~i~gd~~~~~~~~~~~~~~~~adG~~~~t~~~~~~~~RLPag~~a~~Wev~vsg~~~V~~v~la---- 571 (580) T protein:vir:93 496 GGELNGAALNVYPIDGDALVRIESSRFVAATVYADGKAVATVSKLNRMCRLPSGFLAQTWEVEVSANADIAQVTLA---- 571 (580) T ss_pred ccccccccceeeeeccccccccccccceEEEEeeCCeEEEEEecCCceEEccCCccccEEEEEEEeccceeEEEEe---- Confidence 0 01111111 00 111112345677888888877777677777763 455555433222222211110 Q ss_pred CcccccceeEE Q lcl|Aclame:pro 590 GSFGQGRVKNI 600 (681) Q Consensus 590 ~~~~~~~~~~i 600 (681) .++..-+++ T Consensus 572 --~s~~EL~~~ 580 (580) T protein:vir:93 572 --GTGAELAGV 580 (580) T ss_pred --cChHHHhcC Confidence 011111111 No 34 >protein:vir:5120 Length: 615 # NCBI annotation: unknown # Family: family:all:1544 # MgeID: mge:114 # MgeName: PBC5 # Cross-refs: genbank:acc:NP_542277;genbank:gi:18071220;genbank:GeneID:929342 Probab=92.95 E-value=0.0093 Score=31.71 Aligned_cols=523 Identities=14% Similarity=0.140 Sum_probs=192.4 Q ss_pred CCcceEeecccccccccchhcccchHHHHHHHHhhhhccEEeeccCeeeCCchheeeecCCCcCceEEEEEEeCCCCeEE Q lcl|Aclame:pro 1 MSNVRVLQRSFGGGEISPEMFGRIDDVKYQSGLAICRNFVVKPQGPAENRAGFAFVREVKDSAKKVRLIPFTYSVTQTMV 80 (681) Q Consensus 1 M~~~~~~q~~f~~GElsP~l~~R~D~~~y~~~~~~~~N~~~~~~Gg~~rRpG~~~v~~~~~~~~~~rlipf~~~~~~~y~ 80 (681) |.++.+. .|. ||+ |+|.-|.=- .+.+..++|+. T Consensus 30 M~~I~i~--~f~-Ge~-Prl~P~lLP---~~~A~~A~N~~---------------------------------------- 62 (615) T protein:vir:51 30 MVAIKIS--AFA-GEQ-PMLLPRLLP---ETGATAAMNVR---------------------------------------- 62 (615) T ss_pred eEEEeec--ccc-ccc-ccchhhhcc---CcccceEEeee---------------------------------------- Confidence 5554432 222 332 222222100 11222223332 Q ss_pred EEEcCCEEEEEeCCcEEeeC--CEEEEE---eCCCCc--hhhceeeEEEeccEEEEEcCCcceEEEEECCCCcEEEEEEe Q lcl|Aclame:pro 81 IELGAGYFRFHTNGGTLLDG--AVPYEI---ANPYAE--ADLFNIHYVQSADVLTLVHPNYAPRELRRLGATNWQLATIA 153 (681) Q Consensus 81 lefg~~~irv~~~~~~v~~~--~~~~~i---~TPy~~--a~l~~l~~~qsaD~l~lvh~~~~p~~l~R~~~~~W~~~~~~ 153 (681) |.+|-|+-+++-..+.+- ..+.++ ..-|-. .++..++----.|++|....++|-.+ ....++.+.. T Consensus 63 --~~~G~ltP~~~~~~~~~~~~~~~~Tif~~~~~W~~w~~~V~av~sPvA~DRvy~tgdg~Pkv~---~~~~sY~LgV-- 135 (615) T protein:vir:51 63 --LNDGGLTPINKPIEVATIATASQKTIYRHQGSWLSWPNVVNAVPGPVAQDRLYFTGDGAPKVK---IGGVDYALKV-- 135 (615) T ss_pred --ecCCeeeeecCcccccccccccceeeeeecCceeccCCceeEccCCcccceeEEcCCCcceEe---ecccCccccc-- Confidence 222222222211100000 000000 000000 01111111111257777766655533 3444444433 Q ss_pred eccCcccccccceeeecCcceeeEEEEEEEEEeccceEEecCcccceeccceeccceeeeEEeeccC----Cceeeeecc Q lcl|Aclame:pro 154 FTSPVATPTSVTATSNNKGTDYTYRYVVTALDAEGKTESAPSSAGTCTNNLFTNGGANTIAWSASSG----ASRYNVYKE 229 (681) Q Consensus 154 f~~~~~~~~~~t~t~~~~~~~~t~~~~v~a~~~~g~~~s~~s~~~t~~~~~~~~~~~~~~~w~a~~~----~~~~~v~~~ 229 (681) +.|....++.....+.+...+..|..+-++..| .|+.++....... ...+++.+..-.+... ....++|+. T Consensus 136 --paPs~ap~~~~~g~g~~d~etr~Yv~TfVt~~G-eES~PSp~S~~v~--v~~g~tVtLs~~pa~~~~~~i~~rRIYRS 210 (615) T protein:vir:51 136 --PRPTGALTAALSGTGSGDIQSRTYVYTWVTSFG-EESAPCPASIIVD--WKPGQTVTLSGFAATPGGRSITTQRIYRS 210 (615) T ss_pred --cCCCccceEEecCCCCccccceEEEEEEEcCCC-CcCCCCccceeeE--ecCCCeEEEeeccCCcCCCceeeEEEEEe Confidence 222222222222222333445556556666555 4555553322221 1233333333322221 234578886 Q ss_pred ccee----EEEeec--cceeEEEecccc---ccccccccccccCccccCCceeEEEEEcCeEEEEecCCCccEEEEEecc Q lcl|Aclame:pro 230 QGGL----YGYIGQ--TTGTSLVDDNIA---PDLSVTPPIYDAVFNAAGDYPAAVSYFEQRRCFAGTTNKPQNIWMTRSG 300 (681) Q Consensus 230 ~~~~----~~~~~~--~~~t~~~~~~~~---~~~~~~~~~~~~~~s~~~g~p~~v~f~~~RL~~~~~~~~p~~v~~S~~g 300 (681) .++. +.++.. .+.+++.|.... ...-.+.+|.+|+-+-. |- +.+-.+ +.+|+.. +.||||..- T Consensus 211 ~tg~~gtdy~lVAel~as~~sf~D~~~~~~Lg~~Lps~~w~~PP~~l~-GL---~~m~NG--imAgF~G--neV~FsEpy 282 (615) T protein:vir:51 211 QTGKTGTGLYLIAERAASAGNFTDNIAVDQFQEPLPSADWNEPPDGLA-GL---AEMPNG--MMAAFVG--RSIYFCEPY 282 (615) T ss_pred ccCCCceeeEEEeeecccceeeeeccchhhcCcccccccccCcCcchh-hh---hccccc--eEEeecC--CEEEEecCC Confidence 6552 444432 222344444321 12234567777664322 10 111111 1233322 579999886 Q ss_pred ChhcccccC-CCcCCccEEEEEcCCCceEEEEEeec-CcEEEEecCcEEEEecCCCcccccceeEEEEeeccCCcccc-c Q lcl|Aclame:pro 301 TESAMSYSL-PVRDDDRVAFRVAAREANAIRHIVPL-TELLLLTSSGEWRVASVNSDAVTPTTISVRPQSYVGATDVQ-P 377 (681) Q Consensus 301 d~~nF~~~~-~~~D~D~i~~~~~~~~~~~i~~~~~~-~~Llv~t~~~e~~~~~~~~~~ltP~~~~~~~~s~~g~~~~~-P 377 (681) -.+-+=.+- -..|.|- -.+.+. ..|+|+|.+.-|+++|..-+.++..... ..--|-+.+ = T Consensus 283 ~PyAWP~~Yr~t~d~dI-------------VaiA~~gt~LVV~TkG~PYl~sG~sP~sms~~kL~----~~qpCvS~rsi 345 (615) T protein:vir:51 283 RPHAWPEKYSRNVGSDI-------------VGIAALGSILVVVTKGKPYLLAGTHPDSMQQQQLE----ENLPCINARSI 345 (615) T ss_pred CCcccchhcccCcCCCe-------------eEEEecccEEEEEEcCceEEEEcCChhhccccccc----cccccccccce Confidence 555552211 1124333 334444 4799999999999998543334333222 223464433 4 Q ss_pred EEeCCeEEEEEcCCCEEEEEEEeeeccceeccchhhhhHHhcCC------CCEEEEEEecCCCEEEEEEcCC--Ce-EEE Q lcl|Aclame:pro 378 VVVNNTTIYGAARGGHVRELAYNWQANGFVTGDLSLRAAHLFDN------LDILDMAYAKAPQPIVWFISSS--GK-LLG 448 (681) Q Consensus 378 v~vg~~v~fv~~~g~~vre~~~~~~~~~~~~~dlt~~~~hl~~~------~~~~~~~~~~~p~~~~~~~~~d--g~-l~~ 448 (681) |.+|..++|.+..| +-.+.-+.. +=+..+.||.- ..-...+++-+..-+.++...| |+ +.+ T Consensus 346 V~~~~~v~Yas~dG--LV~v~~~G~--------a~vvT~~l~t~~qW~~l~P~ti~a~~~eG~Y~~~Y~~~~~~g~~~~g 415 (615) T protein:vir:51 346 VDLGHAVCYASNDG--LVAVRGDGS--------IRLVTEQLLSREKWLDLSPFTIIGGQINGAYLLFYDNLSASGERIAG 415 (615) T ss_pred eEecceEEeecCCc--eEEEecCCc--------hhhhhhhccChhHHHhcCCceEEEEeecCeEEEEeccCCCCcceeee Confidence 77899999999988 322211111 11111222211 0112233444444444444333 33 233 Q ss_pred EEEecccceEEEEEeccCCceEEEEEEeeCCCCEEEEEEEECCCCceEEEEeeccCcccc-----ccccceEeecceeec Q lcl|Aclame:pro 449 LTYVPEQQIGAWHQHDTDGVFESCAVVAEGNEDRLYAVVRRTIGGNEVRYVERMASRQFD-----AQADAFFVDSGLTYS 523 (681) Q Consensus 449 ~ty~~~q~v~aW~~w~~~g~~~~v~~~~~~~~d~l~~~v~r~~~g~~~~~ie~~~~~~~~-----~~~~~~~lD~~~~y~ 523 (681) .-.+.--...-|.+++.... |...+..+|.||++.+=+ +.|++++..... .....|.+.+..+ T Consensus 416 ~~~~~~~~~~f~ir~~~~~~----~~~~d~~~~~Ly~l~~g~------~~i~~~~a~~g~~~~~~WrSK~F~~~~p~s-- 483 (615) T protein:vir:51 416 SISIYVDGQPFLVRSSEIAS----SSFFDIGDTALYFMAPGS------KTIQRFDAPQGAPQTLYWRSKEFITTSPSS-- 483 (615) T ss_pred eeEEecCCceeEEEeecccc----eeeeEecCceEEEEEcCC------ceEEEEecCCCCcceEEecCceEEccCCCc-- Confidence 22211111245667765432 233344567788665311 223333321100 0000111111000 Q ss_pred cCcceeeccCCccCCcEEEEEeCCeeeccEeecCCEEEeCCCCCeEEEeeecceeEEecceEecCCCcccccceeEEEEE Q lcl|Aclame:pro 524 GEPVSHISGLEHLEGKTVSILADGAVHPQRVVTDGAIDLDVEAGTVHIGLPITAELQTLPVAMQLDGSFGQGRVKNINKL 603 (681) Q Consensus 524 ~~~~~~~~gl~~l~G~~v~v~adG~~~~~~~v~~g~i~l~~~~~~v~vG~~y~~~v~~~p~~~~~~~~~~~~~~~~i~rv 603 (681) ++- +.|=-.|..++ ......+..++.+-.. T Consensus 484 --------------------------f~~----------------~~V~~~~~~~~--------~e~~~~~~~~~~~~aa 513 (615) T protein:vir:51 484 --------------------------MGA----------------VLVDSGSAISL--------KALEALQEERNQIIAA 513 (615) T ss_pred --------------------------ceE----------------EEEcCCcccch--------hhhhhhhhhhhhcccc Confidence 000 00000000000 0111222333333333 Q ss_pred EEEEeccccEEEecCCCeeEEeeeeccccc-CCcCCcc---cceEEEEecCCcCcceEEEEEECCc--cCEEEEEEEEEE Q lcl|Aclame:pro 604 WLRVHRSSGIFAGPHADALTEVKQRTSEPY-GSPPALK---SEEIPLVLSPKWGDSGQLFVRQADP--LPLMIVSMSAEI 677 (681) Q Consensus 604 ~l~~~~S~~~~v~~~~~~~~~~~~~~~~~~-~~~~~~~---tG~~~v~~~~~~~~~~~v~I~~~~P--~P~tvlai~~ev 677 (681) ...+..++....+.....+.+... +++.+ .-|+++- .+.+.+.+...=--..+++ +-+.| ||.-+.+-.||| T Consensus 514 ~~ti~a~g~~~~~l~~~~l~~~~i-~gd~~~~ip~~~t~~~~~~v~~~l~a~G~~~~t~~-k~~~~~RLP~g~~ar~Wev 591 (615) T protein:vir:51 514 NAALFAAGDLQGGINARPLNDRSI-NGDDLQPVPPPPTAADAASLTVSIFADGKLIQTID-KVDRIARVRAGLKARKWEV 591 (615) T ss_pred ceeEEecccccccccccccccccc-CcccccccccccccccccceeEEEecCCceeeeec-cCCceeEcccCcccceEEE Confidence 333333332222222222211111 11111 1111110 1112222211000011111 22222 455568899999 Q ss_pred EEcC Q lcl|Aclame:pro 678 AIGA 681 (681) Q Consensus 678 ~vg~ 681 (681) +|=| T Consensus 592 evsg 595 (615) T protein:vir:51 592 AIST 595 (615) T ss_pred EEEe Confidence 9999 No 35 >protein:vir:96666 Length: 462 # NCBI annotation: ORF016 # Family: family:all:2450 # MgeID: mge:1623 # MgeName: Twort # Cross-refs: genbank:acc:YP_238545;genbank:gi:66391271;genbank:GeneID:5130448 Probab=64.61 E-value=0.062 Score=27.21 Aligned_cols=294 Identities=15% Similarity=0.108 Sum_probs=120.6 Q ss_pred CCc-ceEeecccccccccch-hcccchHHHHHHHHhhhh---ccEEeeccCeeeCCchheeeecCCCcCceEEEEEEeCC Q lcl|Aclame:pro 1 MSN-VRVLQRSFGGGEISPE-MFGRIDDVKYQSGLAICR---NFVVKPQGPAENRAGFAFVREVKDSAKKVRLIPFTYSV 75 (681) Q Consensus 1 M~~-~~~~q~~f~~GElsP~-l~~R~D~~~y~~~~~~~~---N~~~~~~Gg~~rRpG~~~v~~~~~~~~~~rlipf~~~~ 75 (681) |.+ ...++-....|+-.|. +..|.=+.+..+.++.+- |--..|.+-- -|++|=|-. .|| +. T Consensus 119 ~~t~~vsi~~tl~n~~~d~~~~~~~dai~~~a~tiE~a~Fygds~l~~~~~~---~gleFDGl~-------~lI----~~ 184 (462) T protein:vir:96 119 SDTKNLSIASTLVNNIQDPMQILTEDAIAVVAKTIEWASFYGDASLTADPTG---QGLEFDGLA-------KLI----DK 184 (462) T ss_pred eeeeeechhhhhccchhhHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCccc---cccchhhhh-------hhc----CC Confidence 221 1112333344555555 233444444444444331 1111221111 156654322 233 23 Q ss_pred CCeEEEEEcCCEEEEEeCCcEEeeC--CEEEEEeCCCC-chhhce----------------eeEEEeccEEEEEcCCcce Q lcl|Aclame:pro 76 TQTMVIELGAGYFRFHTNGGTLLDG--AVPYEIANPYA-EADLFN----------------IHYVQSADVLTLVHPNYAP 136 (681) Q Consensus 76 ~~~y~lefg~~~irv~~~~~~v~~~--~~~~~i~TPy~-~a~l~~----------------l~~~qsaD~l~lvh~~~~p 136 (681) ++.+-++=+.....+..-.+..... |.+-.+--|+. .+++.. ++.--...-.+-+++.+.. T Consensus 185 ~NViDarG~~Ls~~~ln~aa~~i~~~fGt~TD~~~p~~v~a~f~~~~l~~qrv~~~~n~g~~~~G~~v~~f~s~~G~I~L 264 (462) T protein:vir:96 185 DNVIDAKGESLTETLLNRSAVLIGKSFGTATDAYMPIGVHADFVNSVLGRQMQLMQDNSGNVNAGYNVQGFYSSRGFIKL 264 (462) T ss_pred CceeecCCCCccHHHHhhhhhhcccccCChhheecchHHHHHHHHhhcCceEEEEcCCCCceeeeeeccceeeeeeeeee Confidence 3322222110000000000000000 11111111221 111110 0000001111111211111 Q ss_pred --EEEEECCCCcEEEEE-EeeccCcccccccceeeec--------CcceeeEEEEEEEEEeccceEEecCcccceeccce Q lcl|Aclame:pro 137 --RELRRLGATNWQLAT-IAFTSPVATPTSVTATSNN--------KGTDYTYRYVVTALDAEGKTESAPSSAGTCTNNLF 205 (681) Q Consensus 137 --~~l~R~~~~~W~~~~-~~f~~~~~~~~~~t~t~~~--------~~~~~t~~~~v~a~~~~g~~~s~~s~~~t~~~~~~ 205 (681) ..+.+. .-.+.+ ..-.+....+..+++++.. ......++|++.+++..+ +|.++...+.+.... T Consensus 265 ~~s~~m~~---~~i~~~~~~~~p~ap~~~~vsaTv~t~~~g~f~~~~d~~~y~Y~V~avs~dg--eS~PS~~VtaTva~~ 339 (462) T protein:vir:96 265 HGSTVMEN---ELILDESLQPLPNAPQPATVKATVETGKKGLFTDEHDRAELTYKVVVNSDDA--QSAPSEAVTATVNNA 339 (462) T ss_pred CCceecCc---ccccccccccCCCCCCCCceeEEEEeCCCCCCCCccCceeEEEEEEEECCCC--ccccceeeEeeeecc Confidence 111110 001110 0001112222333443221 113567889999988876 677888777777666 Q ss_pred eccceeeeEEeeccCCc--eeeeeccc--ceeEEEeeccc--------eeEEEeccccccccccccccccCccccCCcee Q lcl|Aclame:pro 206 TNGGANTIAWSASSGAS--RYNVYKEQ--GGLYGYIGQTT--------GTSLVDDNIAPDLSVTPPIYDAVFNAAGDYPA 273 (681) Q Consensus 206 ~~~~~~~~~w~a~~~~~--~~~v~~~~--~~~~~~~~~~~--------~t~~~~~~~~~~~~~~~~~~~~~~s~~~g~p~ 273 (681) .++..-+++|.++.+.. ++.||++. .+.+.+++.-. .+.+.+ ...+.+..-..|-.... |+ T Consensus 340 ~~gv~ltIt~~a~~~~~~~~~~IYRk~~~sg~y~li~rv~~~~~n~~gt~tf~D------~n~~iPgt~~~fVge~~-p~ 412 (462) T protein:vir:96 340 TDGVKLEISVNAMYQQQPQFVSIYRQGRKTGDFYLIKRLGMKEVNDEGKLVFYD------LNETIPETTDVFVGEMS-PQ 412 (462) T ss_pred cccceEEEEEcCCccccceEEEEEeecCCccccceeeeeeceeecCCcceeEee------ccCCCCCcccceeecCC-ch Confidence 77778889999988874 49999654 44555554221 122222 22334444444444433 99 Q ss_pred EEEEEc--CeEEEEecCCCccEEEEEe-ccChhcccccCCCcCCccEEEEEcCCCceEEEEEe Q lcl|Aclame:pro 274 AVSYFE--QRRCFAGTTNKPQNIWMTR-SGTESAMSYSLPVRDDDRVAFRVAAREANAIRHIV 333 (681) Q Consensus 274 ~v~f~~--~RL~~~~~~~~p~~v~~S~-~gd~~nF~~~~~~~D~D~i~~~~~~~~~~~i~~~~ 333 (681) +|.||| +|+.|......|..+|+=. .|...=|-|..- + ..-.|++++ T Consensus 413 vi~~~qllpm~~~plA~~n~~~~waVl~yG~Lal~~Pk~~--------~-----~ikNv~~~~ 462 (462) T protein:vir:96 413 VLHLFELLPMMKLPLAQINASVTFAVLWYGALALRAPKKW--------V-----RIKNVKYIV 462 (462) T ss_pred hhhhhhhhhhhhcCcccccchhhhhhhhhhHHHhhccccc--------E-----EEEEEEEeC Confidence 999999 9999987777777777643 111111111110 0 112345555 No 36 >protein:vir:104388 Length: 566 # NCBI annotation: hypothetical protein # Family: family:all:1544 # MgeID: mge:1471 # MgeName: 86 # Cross-refs: genbank:acc:YP_794072;genbank:gi:116222017;genbank:GeneID:4397450 Probab=63.40 E-value=0.32 Score=23.31 Aligned_cols=502 Identities=15% Similarity=0.137 Sum_probs=179.9 Q ss_pred CCcceEeecccccccccchhcccchHHHHHHHHhhhhccEEeeccCeeeCCchheeeecCCCcCceEEEEEEeCCCCeEE Q lcl|Aclame:pro 1 MSNVRVLQRSFGGGEISPEMFGRIDDVKYQSGLAICRNFVVKPQGPAENRAGFAFVREVKDSAKKVRLIPFTYSVTQTMV 80 (681) Q Consensus 1 M~~~~~~q~~f~~GElsP~l~~R~D~~~y~~~~~~~~N~~~~~~Gg~~rRpG~~~v~~~~~~~~~~rlipf~~~~~~~y~ 80 (681) |+ +.++-++ .|-|++..-.- -|-.-|-...-.+ |-++.. --..||+|=. +..-+-= T Consensus 1 ~~-~~~~~~~----~~~~~~~~~~~--------~~~~~M~~i~i~~--------f~Ge~P--r~~p~lLP~~-~a~~A~n 56 (566) T protein:vir:10 1 MP-IAILANS----IINPLIFKPEA--------VKGISMPYIDITT--------MRGMMP--RVVTSMLPDH-SAVLAED 56 (566) T ss_pred Cc-eeeehhh----hccceeecccc--------cccceeeEEeecc--------cccccc--cchhhhcccc-ccceEEe Confidence 44 2222222 12222221110 0001111110000 001100 0001122200 0011111 Q ss_pred EEEcCCEEEEEeCCcE-------------------Eee-CCEEEEEeCCCCchhhceeeEEEeccEEEEEcCCcce---E Q lcl|Aclame:pro 81 IELGAGYFRFHTNGGT-------------------LLD-GAVPYEIANPYAEADLFNIHYVQSADVLTLVHPNYAP---R 137 (681) Q Consensus 81 lefg~~~irv~~~~~~-------------------v~~-~~~~~~i~TPy~~a~l~~l~~~qsaD~l~lvh~~~~p---~ 137 (681) +-|.+|.|+-++.--- .+. .+.+--+..|=..++ -..+|+....+|- . T Consensus 57 ~~~~~G~itP~~~~~~~~~~~~~~~kTif~y~~~~W~~w~~~V~~ir~PvAqD~---------~~rvY~tg~~~Pk~t~~ 127 (566) T protein:vir:10 57 CHFRFGVITPERQISGVEKTFTIKPKTIFHYRDDFWFAWPDVVDVIRSPVAQDN---------YGRIYYTDGKFPKVTAA 127 (566) T ss_pred eeecCCeeeeeecccccccccccCceeeeeecCcEeEEeCCceeeccCccccCC---------cceEEEeeCCcceeeec Confidence 1222333332222100 000 000011112211111 1155555444332 2 Q ss_pred EEEECCCCcEEEEEEeec-cCccccccc-----ceee-ecCcceeeEEEEEEEEEeccceEEecCccc-ceeccceeccc Q lcl|Aclame:pro 138 ELRRLGATNWQLATIAFT-SPVATPTSV-----TATS-NNKGTDYTYRYVVTALDAEGKTESAPSSAG-TCTNNLFTNGG 209 (681) Q Consensus 138 ~l~R~~~~~W~~~~~~f~-~~~~~~~~~-----t~t~-~~~~~~~t~~~~v~a~~~~g~~~s~~s~~~-t~~~~~~~~~~ 209 (681) .|.-.+.....-...... +.|...... +.+. .++...-+..|..+-++..| .|+.++... ..... ..+. T Consensus 128 diAt~g~~~~pa~~y~LgVPaPs~apv~~~~~~sg~~~~~~~d~~tr~Yv~TfVt~~G-eES~PS~~S~~v~v~--~~gs 204 (566) T protein:vir:10 128 EIATKGEGNFPAASYRLGIPAPTTAPVCTVQKGEGATDENPNDDETRFYTETFVSAYG-EEGPPGPESLEVTVG--IPDT 204 (566) T ss_pred ceeeccccccccccccccCCCCcccceeeccCCCcccCCCCcccceeEEEEEEEcCCC-CcCCCccccceeEec--CCCc Confidence 232222222212211221 111111000 0000 01122334456656666544 455544322 11111 1122 Q ss_pred eeeeEEe----eccCCceeeeecccce----eEEEeeccce--eEEEeccccc---cccccccccccCccccCCceeEEE Q lcl|Aclame:pro 210 ANTIAWS----ASSGASRYNVYKEQGG----LYGYIGQTTG--TSLVDDNIAP---DLSVTPPIYDAVFNAAGDYPAAVS 276 (681) Q Consensus 210 ~~~~~w~----a~~~~~~~~v~~~~~~----~~~~~~~~~~--t~~~~~~~~~---~~~~~~~~~~~~~s~~~g~p~~v~ 276 (681) ..+.+.. ......+.++|+...+ -|-++..-.. .++.+..... ..-.+.+|.+|+-+-. | -+. T Consensus 205 ~V~ltl~~~p~~~~~i~~~RIYRS~tg~~gtdy~lVael~as~~sf~Dd~~~~~lg~~Lps~~w~~PP~~m~-G---L~~ 280 (566) T protein:vir:10 205 PVQLTLSPVPLQDANINRRRIYRSVSGGGEADFLLVAELEASVLSYTDNIPAKNLGPSLATWDYLPPPENMT-G---LCL 280 (566) T ss_pred eEEEEecCCCcCcCCceeEEEEEecCCCCceeEEEEeeecccceeeeccccccccCcccccccccCcCcccc-e---eee Confidence 2223222 2334466788887644 2444543322 3333332221 2234567777654432 2 112 Q ss_pred EEcCeEEEEecCCCccEEEEEeccChhccccc--CCCcCCccEEEEEcCCCceEEEEEeec-CcEEEEecCcEEEEecCC Q lcl|Aclame:pro 277 YFEQRRCFAGTTNKPQNIWMTRSGTESAMSYS--LPVRDDDRVAFRVAAREANAIRHIVPL-TELLLLTSSGEWRVASVN 353 (681) Q Consensus 277 f~~~RL~~~~~~~~p~~v~~S~~gd~~nF~~~--~~~~D~D~i~~~~~~~~~~~i~~~~~~-~~Llv~t~~~e~~~~~~~ 353 (681) +-.+= .+|+.. +.||||..--.+-+=.+ .++ |.|- -.+.+. ..|+|+|.+.-|+++|.. T Consensus 281 m~NGi--mAgF~G--neV~FsEpylPyAWP~~Yr~t~-~~dI-------------VaiA~~gt~LVV~TkG~PYl~sG~s 342 (566) T protein:vir:10 281 MANGI--AAGFAG--NEVMFSEAYLPYAWPEVNRHTT-AEDI-------------VAVCPLGTSLVVATKGEPYLFSGVS 342 (566) T ss_pred cccce--EEeecC--CEEEEecCCCCcccchhhccCC-CCCe-------------EEEEeccceEEEEEcCceEEEEcCC Confidence 22221 233322 67999988665555222 122 3332 334444 479999999999999854 Q ss_pred CcccccceeEEEEeeccCCccc-ccEEeCCeEEEEEcCCCEEEEEEEeeeccceeccchhhhhHHhcC-------CCCEE Q lcl|Aclame:pro 354 SDAVTPTTISVRPQSYVGATDV-QPVVVNNTTIYGAARGGHVRELAYNWQANGFVTGDLSLRAAHLFD-------NLDIL 425 (681) Q Consensus 354 ~~~ltP~~~~~~~~s~~g~~~~-~Pv~vg~~v~fv~~~g~~vre~~~~~~~~~~~~~dlt~~~~hl~~-------~~~~~ 425 (681) -+.++.... -..--|-+- .=|.+|..++|.+..| +-.+.-+.+ .=+..+.||. ...-. T Consensus 343 P~sms~~kL----~~~qaCvS~rsiV~~~g~v~Yas~dG--Lv~v~a~g~--------a~vvT~~l~t~~qW~~~~~P~t 408 (566) T protein:vir:10 343 PSTISGSKI----PSMQACLSRQSMVAMEGFVLYAGTNG--LVSVDANGN--------AALATEQIISPEQWQTQFNPAS 408 (566) T ss_pred hhhcccccc----ccccccccccceeeecceEEeecCCc--eEEEecCCC--------hhhhhhhhcChhHHHhcCCcce Confidence 334444222 223346443 3477899999999988 322211111 1111112221 01122 Q ss_pred EEEEecCCCEEEEEEcCCCeEEEEEEecccceEEEEEeccCCceEEEEEEeeCCCCEEEEEEEECCCCceEEEEeeccC- Q lcl|Aclame:pro 426 DMAYAKAPQPIVWFISSSGKLLGLTYVPEQQIGAWHQHDTDGVFESCAVVAEGNEDRLYAVVRRTIGGNEVRYVERMAS- 504 (681) Q Consensus 426 ~~~~~~~p~~~~~~~~~dg~l~~~ty~~~q~v~aW~~w~~~g~~~~v~~~~~~~~d~l~~~v~r~~~g~~~~~ie~~~~- 504 (681) ..+++-+-.-+.++...||.--++.+++.-+. -++-+.+. .+.+. +-..|.||++-.+.+ |...-.. T Consensus 409 i~A~~~eG~Y~a~Y~~~~g~~~~fi~dp~g~~--i~~l~~~~--d~~~~--d~~~d~ly~~~g~~i------~~~~~g~~ 476 (566) T protein:vir:10 409 IVAYPWRGEYIACYTKPDGEKDVFVFNPAGMD--IRHLSTPF--DCACV--DLVNDVMRVVSGQNM------SAMAGGRL 476 (566) T ss_pred EEEEeecCeEEEEEeCCCCCccEEEEcccCce--EEEecccc--ceeEE--eeccCeeeeeeCCee------eeecCCCC Confidence 34455566667777777887777777764332 23333332 22222 344678888753321 1111110 Q ss_pred -ccccccccceEeecceeeccCcceeeccCCccCCcEEEEEeCCeeeccEeecCCE-----EEeCC-CCCeEEEeeecce Q lcl|Aclame:pro 505 -RQFDAQADAFFVDSGLTYSGEPVSHISGLEHLEGKTVSILADGAVHPQRVVTDGA-----IDLDV-EAGTVHIGLPITA 577 (681) Q Consensus 505 -~~~~~~~~~~~lD~~~~y~~~~~~~~~gl~~l~G~~v~v~adG~~~~~~~v~~g~-----i~l~~-~~~~v~vG~~y~~ 577 (681) .........|.+.+..++...-. .+ +..+-..+.+++|+... .....|. ..|+. .+..++|=+.=. T Consensus 477 ~~~~~WrSK~f~~p~~~sf~~~rV--~s--~~~~~v~i~i~ad~~~v--~~~a~G~~~~~~~rLp~~~~~~Wevevsg~- 549 (566) T protein:vir:10 477 PSLIRWHSKVFSLPERTSFSCLRV--KS--PTPERVGITVLADDVPV--IHLAPGSLSGSVVRLPAATGQNWQVLVSGF- 549 (566) T ss_pred CceEEEecceEEecCCcceeEEEe--ec--CCccceeEEEEECCEEE--EEeCCCccccceeecCCCccceEEEEEEec- Confidence 00011111222333222211000 00 11222344555665543 1122222 22221 122222211111 Q ss_pred eEEecceEecCCCcccccceeEEEEEEEEEeccc-cEEE Q lcl|Aclame:pro 578 ELQTLPVAMQLDGSFGQGRVKNINKLWLRVHRSS-GIFA 615 (681) Q Consensus 578 ~v~~~p~~~~~~~~~~~~~~~~i~rv~l~~~~S~-~~~v 615 (681) -+|.++.|. .|. .+-+ T Consensus 550 --------------------~~V~~v~La--~S~~EL~~ 566 (566) T protein:vir:10 550 --------------------GQVERITLS--TSMSELPI 566 (566) T ss_pred --------------------ccEEEEEEe--cchhhcCC Confidence 122232222 000 0001 No 37 >protein:vir:9268 Length: 472 # NCBI annotation: 10 # Family: family:all:1540 # MgeID: mge:164 # MgeName: ST64T # Cross-refs: genbank:acc:NP_720332;genbank:gi:24371590;genbank:GeneID:955815 Probab=55.06 E-value=0.49 Score=22.29 Aligned_cols=432 Identities=11% Similarity=0.051 Sum_probs=162.4 Q ss_pred EEcCCcceEE-EEE---CC-CCcEEEEEEeeccCcccccccceeeecCcceeeEEEEEEEEEeccceEEecCcccceecc Q lcl|Aclame:pro 129 LVHPNYAPRE-LRR---LG-ATNWQLATIAFTSPVATPTSVTATSNNKGTDYTYRYVVTALDAEGKTESAPSSAGTCTNN 203 (681) Q Consensus 129 lvh~~~~p~~-l~R---~~-~~~W~~~~~~f~~~~~~~~~~t~t~~~~~~~~t~~~~v~a~~~~g~~~s~~s~~~t~~~~ 203 (681) +...+.|..+ +.+ .+ ..+|...+ +.+.+...-+.. .....++.-..- .+ .+...... T Consensus 1 m~~~~ipl~~g~~~~~~~a~~~~~~pvn--~y~~~~~~~~ss-----------~~Lr~~pG~~~~-a~-~~G~~RG~--- 62 (472) T protein:vir:92 1 MPIQQLPMMKGMGKDFKNADYIDYLPIN--MLATPKEVLDSS-----------GYLRSFPGIAKR-ND-VNGVSRGV--- 62 (472) T ss_pred CceeeccccccccccCccCcceeeeecc--cccccccccccc-----------cceeecccceee-cC-CCCcccce--- Confidence 1112222211 111 11 11222111 111111100000 000000000000 00 00000000 Q ss_pred ceeccceeeeEEeeccCCceeeeeccccee-----EEEeeccceeEEEec---------cccccccccccccccCccccC Q lcl|Aclame:pro 204 LFTNGGANTIAWSASSGASRYNVYKEQGGL-----YGYIGQTTGTSLVDD---------NIAPDLSVTPPIYDAVFNAAG 269 (681) Q Consensus 204 ~~~~~~~~~~~w~a~~~~~~~~v~~~~~~~-----~~~~~~~~~t~~~~~---------~~~~~~~~~~~~~~~~~s~~~ 269 (681) .+ .........+.+..-|.+....+.+ .......+....... .... +..+.+.....+...- T Consensus 63 ~~---~~~~~~ly~V~G~~Ly~v~~~iG~i~gsgrVsMa~n~~~~av~~~~~~~~Y~~~~~~~-t~~~~~~d~~f~~~dl 138 (472) T protein:vir:92 63 EY---NTAQNAVYRVCGGKLYKGEAVVGDVAGSGRVSMAHGRTSQAVGVNGQLIEYRYDGAVK-TVSNWPADSGFTQYEL 138 (472) T ss_pred ee---eeeCCeEEEEeCcceEEEEeeEeeccCcccEEEecCCeEEEEEECCceeEEEEecchh-hhhcccCccccccccc Confidence 00 0000011112222222111100000 000000000000000 0000 0111111111111223 Q ss_pred CceeEEEEEcCeEEEEecCCCccEEEEEeccChhcccccCCCcCCccEE-EEEcCCCceEEEEEeecC-cEEEEecCcE- Q lcl|Aclame:pro 270 DYPAAVSYFEQRRCFAGTTNKPQNIWMTRSGTESAMSYSLPVRDDDRVA-FRVAAREANAIRHIVPLT-ELLLLTSSGE- 346 (681) Q Consensus 270 g~p~~v~f~~~RL~~~~~~~~p~~v~~S~~gd~~nF~~~~~~~D~D~i~-~~~~~~~~~~i~~~~~~~-~Llv~t~~~e- 346 (681) +-+..|+|..+|++|.- ..-+.++.|...|-+ +-|+.+ ++.+..+++.|.-++..+ .|++|.+..- T Consensus 139 ~~~~dv~f~dGyfV~~~--~gt~~~~iS~l~d~~---------~~~~y~~fa~AE~~pD~Ivgi~~~~~~l~lfG~~TiE 207 (472) T protein:vir:92 139 GSVRDITRLRGRYAWSK--DGTDSWFITDLEDES---------HPDRYSAEYRAESQPDGIIGIGSWRDFIVCFGSSTIE 207 (472) T ss_pred cceeEEEEecceEEEcc--CCCceEEEeccCCcc---------ccccccccccccCCCCceEEEEeeccEEEEEeccceE Confidence 44568999999987772 122345555544422 122322 455777888888888875 5888888765 Q ss_pred -EEEecCCCcccccceeEEEEee----ccCCcc-cccEEeCCeEEEEEcCCCEEEEEEEeeeccceeccchhhh-hHHhc Q lcl|Aclame:pro 347 -WRVASVNSDAVTPTTISVRPQS----YVGATD-VQPVVVNNTTIYGAARGGHVRELAYNWQANGFVTGDLSLR-AAHLF 419 (681) Q Consensus 347 -~~~~~~~~~~ltP~~~~~~~~s----~~g~~~-~~Pv~vg~~v~fv~~~g~~vre~~~~~~~~~~~~~dlt~~-~~hl~ 419 (681) |..+|.. ++..+-+.+++ ..||.. =.=+.+|++++|+...+..- ..-+..++|+++=||-+ ++..+ T Consensus 208 vw~ntG~a----d~~~fpy~r~~g~~i~~Gcaa~~sv~~~~~s~~~l~~~~~g~---~~V~~~~g~qa~rIST~aIE~~i 280 (472) T protein:vir:92 208 YFSLTGAT----TVGAALYVAQPSLMVQKGIAGTYCKTPFADSYAFISHPATGA---PSVYIIGSGQASPIATASIEKII 280 (472) T ss_pred EEEecCCC----CcCcCceEEcCcceeeecccCcchhhecCceEEEEecCCCcc---cEEEEccCceeEEecCHHHHHHH Confidence 7776642 33334455554 468753 34567899999999877421 01123356677777432 33344 Q ss_pred CCC------CEEEEEEecCCCEEEEEEcCCCeEEEEEEec--ccceEEEEEeccCC---ceEEEEEEeeCCCCEEEEEEE Q lcl|Aclame:pro 420 DNL------DILDMAYAKAPQPIVWFISSSGKLLGLTYVP--EQQIGAWHQHDTDG---VFESCAVVAEGNEDRLYAVVR 488 (681) Q Consensus 420 ~~~------~~~~~~~~~~p~~~~~~~~~dg~l~~~ty~~--~q~v~aW~~w~~~g---~~~~v~~~~~~~~d~l~~~v~ 488 (681) +.. .....+++.+-+.+..+...| . .+.|+- .|.-.-||.-+.+. ..+..+.+.-.+. +++ = T Consensus 281 ~~y~~~e~~~a~~~s~~~eGH~fy~LtfP~-~--Tw~yD~at~~~~e~W~~~~sg~~~~~~R~~~~~~~~g~---~iv-G 353 (472) T protein:vir:92 281 RSYTADELATGVMEALRFDSHELLIIHLPR-H--VLVYDASSSQNGPQWCVLKTGLYDDVYRAIDFMYEGNQ---ITC-G 353 (472) T ss_pred HhcCcchhceeeEEEEEecCeeEEEEEcCC-c--eEEEEcccCcCCceeeeecCCCcccceeEEEEEeeCCe---EEE-E Confidence 332 234566777778777777665 3 344442 22222488887753 3455555433211 111 1 Q ss_pred ECCCCceEEEEeeccCccccccccceEeecceeeccCcceeeccCCccCCcEEEEEeCCeeeccEeecCCEEEeCCCCCe Q lcl|Aclame:pro 489 RTIGGNEVRYVERMASRQFDAQADAFFVDSGLTYSGEPVSHISGLEHLEGKTVSILADGAVHPQRVVTDGAIDLDVEAGT 568 (681) Q Consensus 489 r~~~g~~~~~ie~~~~~~~~~~~~~~~lD~~~~y~~~~~~~~~gl~~l~G~~v~v~adG~~~~~~~v~~g~i~l~~~~~~ 568 (681) -..||. .|.-..+... +.+.+...+--.+++ ..|++ . T Consensus 354 D~~nG~--ly~l~~~~~t---------------~~~~~~~~~~~~P~~-------~~dn~-------------------R 390 (472) T protein:vir:92 354 DKSEAV--TGQLQFDISS---------------QYDKQQEHLLFTPIF-------KADNA-------------------R 390 (472) T ss_pred EcCCCe--EEEEeccccc---------------cCCCcceEEEEeceE-------ecCCC-------------------E Confidence 111111 1110001000 011111110000100 11111 1 Q ss_pred EEEeeecceeEEecceEecCCCcccccceeEEEEEEEEEeccccEEEecCCCeeEEeeeecccccCCcCCcccceEEEEe Q lcl|Aclame:pro 569 VHIGLPITAELQTLPVAMQLDGSFGQGRVKNINKLWLRVHRSSGIFAGPHADALTEVKQRTSEPYGSPPALKSEEIPLVL 648 (681) Q Consensus 569 v~vG~~y~~~v~~~p~~~~~~~~~~~~~~~~i~rv~l~~~~S~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~tG~~~v~~ 648 (681) +. ..+++ ...|..+.. .++.|+..+- |...+.+. +.. . + .+-.+.-.....- T Consensus 391 ~~-----d~eve-------~~~Gv~q~~----d~v~L~wSdd-G~~~~~~~--~~~--~------g-~~g~~~tr~~~~R 442 (472) T protein:vir:92 391 CF-----DLEVE-------SSTGVAQYA----DRLFLSATTD-GINYGREQ--MIE--Q------N-EPFVYDKRVLWKR 442 (472) T ss_pred EE-----EEeee-------ccCCCCCcC----ceEEEEeecc-ccccccce--eec--c------C-Cccchhcceeeee Confidence 11 12222 122222222 2567776664 33332211 010 0 0 0111111222222 Q ss_pred cCCcCcceEEEEEECCccCEEEEEEEEEEE Q lcl|Aclame:pro 649 SPKWGDSGQLFVRQADPLPLMIVSMSAEIA 678 (681) Q Consensus 649 ~~~~~~~~~v~I~~~~P~P~tvlai~~ev~ 678 (681) .|.--+....+|+-..|.|.+|.++..+++ T Consensus 443 lG~~r~~v~f~~r~~~~~~~~l~g~~~~~E 472 (472) T protein:vir:92 443 VGRIRRLIGFKLRVITKSPVTLSGCQIRLE 472 (472) T ss_pred eeecccceeEEEEEEecCcceeeeeEEeeC Confidence 221113334667767788888888888888 No 38 >protein:vir:108312 Length: 458 # NCBI annotation: hypothetical protein # Family: family:all:1540 # MgeID: mge:2007 # MgeName: BA3 # Cross-refs: genbank:acc:YP_001552278;genbank:gi:160700603;genbank:GeneID:5758828 Probab=32.56 E-value=1.4 Score=19.75 Aligned_cols=416 Identities=13% Similarity=0.077 Sum_probs=155.5 Q ss_pred cceEEEE--ECCCCcEEEEE---EeeccCccccccccee----------eecCcceeeEEEEE--EEEEeccceEEecCc Q lcl|Aclame:pro 134 YAPRELR--RLGATNWQLAT---IAFTSPVATPTSVTAT----------SNNKGTDYTYRYVV--TALDAEGKTESAPSS 196 (681) Q Consensus 134 ~~p~~l~--R~~~~~W~~~~---~~f~~~~~~~~~~t~t----------~~~~~~~~t~~~~v--~a~~~~g~~~s~~s~ 196 (681) +++++|- .+....|...+ +.+.+.+...-+.... ...++......+.. ......+...+-... T Consensus 1 m~~~~ip~gsy~a~~~~~daq~~VN~yp~~~e~g~ss~~l~~tPGl~~f~~~~~~~~~g~~~~~g~ly~v~g~~LY~V~~ 80 (458) T protein:vir:10 1 MVQRQIPLVATTAEGDVSGQEILVNVYPRKSDGGKYPFTLRHTPGLAFFCELPTFPVMAMHQNGSRAFAVTPRDMYEISK 80 (458) T ss_pred CceeeeceeeeecccccccceeeeeeeeecccccccccceEecCCceeeecCCCCceeeEEecCCEEEEeeCceEEEEeC Confidence 3333331 11111111111 1111111110000000 00000000000000 000001111110000 Q ss_pred ccceeccceeccceeeeEEeeccCCceeeeecccceeEEEeeccceeEEEeccccccccccccccccCccccCCceeEEE Q lcl|Aclame:pro 197 AGTCTNNLFTNGGANTIAWSASSGASRYNVYKEQGGLYGYIGQTTGTSLVDDNIAPDLSVTPPIYDAVFNAAGDYPAAVS 276 (681) Q Consensus 197 ~~t~~~~~~~~~~~~~~~w~a~~~~~~~~v~~~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~s~~~g~p~~v~ 276 (681) ..+.+.-....+ ++.....+-+...-+-.+. ..+.|...+..... . |.... .-+..|+ T Consensus 81 ~~~~~~iG~i~g---sg~VsMa~ng~q~vi~~G~-~gY~yd~at~~~~~-----------i--~d~~~-----~~~~~v~ 138 (458) T protein:vir:10 81 DGTYKRLGSVDF---KGRVVMEDNGKQIVMVDGE-KGYYYDSETEIVQE-----------I--KAEGF-----YPASTVT 138 (458) T ss_pred CceEEEEecccC---ceeEEEeeCCcEEEEEECC-eEEEEeecccEEEe-----------c--cCccc-----cCcceEE Confidence 000000000000 0001111111111111111 12222222111111 0 11111 1267899 Q ss_pred EEcCeEEEEecCCCccEEEEEeccChhcccccCCCcCCccEEEEEcCCCceEEEEEeecC-cEEEEecCcE--EEEecCC Q lcl|Aclame:pro 277 YFEQRRCFAGTTNKPQNIWMTRSGTESAMSYSLPVRDDDRVAFRVAAREANAIRHIVPLT-ELLLLTSSGE--WRVASVN 353 (681) Q Consensus 277 f~~~RL~~~~~~~~p~~v~~S~~gd~~nF~~~~~~~D~D~i~~~~~~~~~~~i~~~~~~~-~Llv~t~~~e--~~~~~~~ 353 (681) |..+|++|.-... ..++.|...| + --||++++-+..+++.|.-++..+ .|++|.+..- |..+|.. T Consensus 139 ~~dGy~V~~~~g~--~~~~is~L~d--------~--s~d~l~fa~Ae~~pD~iv~i~~~~~~i~~fG~~TiEvw~ntG~a 206 (458) T protein:vir:10 139 YQDGYFIFDRKGT--GQFFISELLD--------V--AFDPLDFATAEGQPDPLLAVLSDHREVFMFGQETIEVWYNSGAA 206 (458) T ss_pred EeCcEEEEEeeCC--CEEEEEecCc--------c--eeCcceeeeecCCCCceEEEEeeccEEEEEeccceEEEEecCCC Confidence 9999998874433 3677775544 1 246999998999999999999885 5888888765 7777754 Q ss_pred CcccccceeEEEEeeccCCcc-cccEEeCCeEEEEEcCCCEEEEEEEeeeccceeccchhhhh-HHhcCCCCEEEEEEec Q lcl|Aclame:pro 354 SDAVTPTTISVRPQSYVGATD-VQPVVVNNTTIYGAARGGHVRELAYNWQANGFVTGDLSLRA-AHLFDNLDILDMAYAK 431 (681) Q Consensus 354 ~~~ltP~~~~~~~~s~~g~~~-~~Pv~vg~~v~fv~~~g~~vre~~~~~~~~~~~~~dlt~~~-~hl~~~~~~~~~~~~~ 431 (681) +-++-.... .. =..||+. -.=+.+|++++|+...+ .|+-+ ++|+++-||-++ +..++. | + T Consensus 207 ~fpy~r~~g--a~-i~~Gcaa~~sv~~~~~t~~~l~~d~-~Vy~l------~g~~~~rIST~aIE~~i~s-------y-~ 268 (458) T protein:vir:10 207 DFPFERNQG--AF-IEKGIGAPYSVAKTNNTVYFIGSDL-MIYQI------TGYTPVRISTHAVEQTLKG-------V-N 268 (458) T ss_pred Ccceeeccc--ce-eeecccCcchhhhhCceEEEEcCCe-EEEEe------cCceeEEeeCHHHHHHHhc-------C-C Confidence 433221110 00 0457753 34466899999999865 23322 466666555422 222222 1 2 Q ss_pred CCCEEEEEEcCCC-eEEEEEEecccc-------eEEEEEeccCC--ceEEEEEEeeCCCCEEEEEEEECCCCceEEEEee Q lcl|Aclame:pro 432 APQPIVWFISSSG-KLLGLTYVPEQQ-------IGAWHQHDTDG--VFESCAVVAEGNEDRLYAVVRRTIGGNEVRYVER 501 (681) Q Consensus 432 ~p~~~~~~~~~dg-~l~~~ty~~~q~-------v~aW~~w~~~g--~~~~v~~~~~~~~d~l~~~v~r~~~g~~~~~ie~ 501 (681) --+.+......+| .+|.+++-..+. ...||.-++.+ ..+..|.+.-.+. +++ T Consensus 269 ~~da~a~t~~~eGH~fy~LtfP~a~~Tw~yD~~t~~Wher~Sg~~~~~Ra~~~v~~~g~---~~v--------------- 330 (458) T protein:vir:10 269 LSDAFAYTYQSEGHLFYVLTIPGKNLTWCYDISSGSWHVRQSYQFDRHVSNNSIYFDQK---TLV--------------- 330 (458) T ss_pred hhheEEEEEEecCeEEEEEECCCCCceeEEecccccceeeccCCCCceEEEEEEEeCCe---EEE--------------- Confidence 2224445555454 345554432211 12477644321 1222221111100 000 Q ss_pred ccCccccccccceEeecceeeccCcceeeccCCccCCcEEEEEeCCeeeccEeecCCEEEeCCCCCeEEEeeecceeEEe Q lcl|Aclame:pro 502 MASRQFDAQADAFFVDSGLTYSGEPVSHISGLEHLEGKTVSILADGAVHPQRVVTDGAIDLDVEAGTVHIGLPITAELQT 581 (681) Q Consensus 502 ~~~~~~~~~~~~~~lD~~~~y~~~~~~~~~gl~~l~G~~v~v~adG~~~~~~~v~~g~i~l~~~~~~v~vG~~y~~~v~~ 581 (681) -|+.+|.. .++ |...+.+ -|-+.+..+.+ T Consensus 331 -------------------------------GD~~ng~l-y~l-d~~~~td------------------~g~~i~~~~~~ 359 (458) T protein:vir:10 331 -------------------------------GDFQNGRI-YIM-ADNYYTD------------------DGDPVVREFIL 359 (458) T ss_pred -------------------------------EEcCCCeE-EEE-cccCcCC------------------CCceeeeeeec Confidence 01111111 111 1111000 11122233333 Q ss_pred cceEecCCCcccccceeEEEEEEEEEeccccEEEecCCCeeEEeeeec--ccccCC--------cCCcccceEEEEecCC Q lcl|Aclame:pro 582 LPVAMQLDGSFGQGRVKNINKLWLRVHRSSGIFAGPHADALTEVKQRT--SEPYGS--------PPALKSEEIPLVLSPK 651 (681) Q Consensus 582 ~p~~~~~~~~~~~~~~~~i~rv~l~~~~S~~~~v~~~~~~~~~~~~~~--~~~~~~--------~~~~~tG~~~v~~~~~ 651 (681) +++. . -..+++++++.|.+.-=-|...+-..+.+..+...+ +..++. ++-.+.-.....=. | T Consensus 360 p~~~--~-----~~~rl~~~~~el~~~tGvg~~~~~~~~p~~~l~~S~d~g~~~s~~~~~~~lg~~gey~tr~~~~rl-G 431 (458) T protein:vir:10 360 PVVN--N-----GREFLTVDSLELDLSSGVGLTVGQGSDPELRVYFSKDNGNEYSQNFKVGKIGRKGEFLTRAKVNRF-G 431 (458) T ss_pred ccee--C-----CCCeEEEEEEEEEEecceeeeeCCCCCceEEEEEeeCCCcccchhHHHhhcCCcchhhhhhhhhhh-c Confidence 2221 0 012333444443332211111111111111111110 111110 11111111222212 2 Q ss_pred cCcceEEEEEECCccCEEEEEEEEEEE Q lcl|Aclame:pro 652 WGDSGQLFVRQADPLPLMIVSMSAEIA 678 (681) Q Consensus 652 ~~~~~~v~I~~~~P~P~tvlai~~ev~ 678 (681) ..++--++|+-..|.|.+|+++..+|- T Consensus 432 ~ar~rvf~v~~s~p~~~~l~ga~~~~r 458 (458) T protein:vir:10 432 CARQFTFKVEISDPIPVDIGGAWVEVR 458 (458) T ss_pred cCcceEEEEEEecchhhcceeeeEEeC Confidence 344445899999999999999999999 No 39 >protein:vir:105525 Length: 472 # NCBI annotation: phage DNA stabilization protein # Family: family:all:1540 # MgeID: mge:1463 # MgeName: phiSG1 # Cross-refs: genbank:acc:YP_516194;genbank:gi:89885997;genbank:GeneID:3964385 Probab=31.68 E-value=1.5 Score=19.65 Aligned_cols=431 Identities=10% Similarity=0.001 Sum_probs=151.9 Q ss_pred EEcCCcceEEEEECCCCcEEEEE---EeeccCcccccccceeeecCcceeeEEEEEEEEEeccceEE--ecCcccceecc Q lcl|Aclame:pro 129 LVHPNYAPRELRRLGATNWQLAT---IAFTSPVATPTSVTATSNNKGTDYTYRYVVTALDAEGKTES--APSSAGTCTNN 203 (681) Q Consensus 129 lvh~~~~p~~l~R~~~~~W~~~~---~~f~~~~~~~~~~t~t~~~~~~~~t~~~~v~a~~~~g~~~s--~~s~~~t~~~~ 203 (681) +..-+.|..+-.+++..+=...+ +.+...|-...+... ....++ |.... .++.....- T Consensus 1 m~~~q~pl~~g~~~~~~~~~~~~~lpvN~y~~p~~~~~ss~-----------~lr~~P----G~~~~~~~~g~~RG~~-- 63 (472) T protein:vir:10 1 MAIMQLPLLRGLGKARDDADYIDALPVNMLATPKPVLNASG-----------YLRSFP----GITHKAEVAGVSRGVQ-- 63 (472) T ss_pred CCceeeecccccccCccccCceeeeeeeeeeccccccccce-----------eecccC----CceeecCCCcccceeE-- Confidence 11122222221122222111111 222212211111000 000000 00000 000000000 Q ss_pred ceeccceeeeEEeeccCCceeeeeccccee--EEEeecc------------ceeEEEeccccccccccccccccCccccC Q lcl|Aclame:pro 204 LFTNGGANTIAWSASSGASRYNVYKEQGGL--YGYIGQT------------TGTSLVDDNIAPDLSVTPPIYDAVFNAAG 269 (681) Q Consensus 204 ~~~~~~~~~~~w~a~~~~~~~~v~~~~~~~--~~~~~~~------------~~t~~~~~~~~~~~~~~~~~~~~~~s~~~ 269 (681) ..........+.+..-|.+....+.+ .+.+... +...+.-.... .+.+..+......-..- T Consensus 64 ----~~~~~~~lY~V~G~~Ly~v~~~vG~iagsg~VsMa~~~~~q~v~v~g~~~~y~y~g~~-~t~~~~~~~~~it~~dl 138 (472) T protein:vir:10 64 ----YNTHEKTVYRGLGNQLYKGHKPIADLAGKGRISMAFSRNSQAVVAAGKMTLYRYDGTV-KTLENWPKEKKYTQYDI 138 (472) T ss_pred ----eeeeCCeEEEEecceEEEEEeeeeeecccccEEEEecCCceEEEEecceeEEEeccch-hhhhhccccccCCcccc Confidence 00001111222222222221110000 0000000 00000000000 00011110011111112 Q ss_pred CceeEEEEEcCeEEEEecCCCccEEEEEeccChhcccccCCCcCCccEE-EEEcCCCceEEEEEeecC-cEEEEecCcE- Q lcl|Aclame:pro 270 DYPAAVSYFEQRRCFAGTTNKPQNIWMTRSGTESAMSYSLPVRDDDRVA-FRVAAREANAIRHIVPLT-ELLLLTSSGE- 346 (681) Q Consensus 270 g~p~~v~f~~~RL~~~~~~~~p~~v~~S~~gd~~nF~~~~~~~D~D~i~-~~~~~~~~~~i~~~~~~~-~Llv~t~~~e- 346 (681) +-+..|+|..+|++|.--.. +.++.|..-|-. -.|+++ ++.+..+++.|.-++..+ .|++|.+..- T Consensus 139 ~~~~~v~~~dGyfV~~~~gt--~~~~iS~L~d~s---------~~~~~~~FatAE~~pD~Ivgi~~~~~~i~lfG~~TiE 207 (472) T protein:vir:10 139 GNVRDMCHLRGRYVWCKDGS--DIFGVTDLEDES---------HPDRYRALYRAESQPDGIIGIDSWRDFIVCFGASTIE 207 (472) T ss_pred CCceeEEEeCceEEEeecCC--ceEEEeecCCcc---------cCCcccceeeecCCCCceEEEEeeccEEEEEeccceE Confidence 34677999999987763221 344466543321 134665 677788888999988875 6888888765 Q ss_pred -EEEecCCCcccccceeEEEEeeccCCcc-cccEEeCCeEEEEEcCCCEEEEEEEeeeccceeccchhh-hhHHhcCCC- Q lcl|Aclame:pro 347 -WRVASVNSDAVTPTTISVRPQSYVGATD-VQPVVVNNTTIYGAARGGHVRELAYNWQANGFVTGDLSL-RAAHLFDNL- 422 (681) Q Consensus 347 -~~~~~~~~~~ltP~~~~~~~~s~~g~~~-~~Pv~vg~~v~fv~~~g~~vre~~~~~~~~~~~~~dlt~-~~~hl~~~~- 422 (681) |..+|..+-++-.-...-...=..||+. =.=+.+|++++|+......- -+ -+..++|+++=||- -++..++.. T Consensus 208 vw~ntG~a~fpf~r~~~~pg~~iq~Gcaa~~sv~~~~~s~~~l~~d~~g~-~~--V~~~~g~q~~rIST~aIE~~i~~y~ 284 (472) T protein:vir:10 208 YFSLTGAADGQSAIYAAQPALMVEKGIAGTHCKTRLGDAHVIISHQATGA-PS--VFLINQAQATSIATATIEKILRSYT 284 (472) T ss_pred EEEecCCCCcceeeeccCccceeeecccCchhhhhhCceEEEEecCCCcc-eE--EEEccCceEEEecCHHHHHHHHhCC Confidence 7777755433311100000112357743 34466899999998765311 01 12335667767743 333344332 Q ss_pred -----CEEEEEEecCCCEEEEEEcCCCeEEEEEEecccceE--EEEEecc-C--CceEEEEEEeeCCCCEEEEEEEECCC Q lcl|Aclame:pro 423 -----DILDMAYAKAPQPIVWFISSSGKLLGLTYVPEQQIG--AWHQHDT-D--GVFESCAVVAEGNEDRLYAVVRRTIG 492 (681) Q Consensus 423 -----~~~~~~~~~~p~~~~~~~~~dg~l~~~ty~~~q~v~--aW~~w~~-~--g~~~~v~~~~~~~~d~l~~~v~r~~~ 492 (681) +-...+|+.+-+.+..+...|. .+.|+-..+.+ .|+.-.. . ...+..|.+.-.+. +++ =-..| T Consensus 285 ~~e~~dA~~~s~~~eGH~fy~LtfP~~---Tw~yD~at~~~~~~w~~~~~g~~~~~~Ra~~~~~~~g~---~~v-GD~~n 357 (472) T protein:vir:10 285 HDELASAVMETVRFDSHELVLIHLSRQ---VLCYDAAANQNGLQWSLLKTGFYHAPYRGIDFMFADHH---LTC-GDKND 357 (472) T ss_pred cccccceeEEEEEeCCeEEEEEEcCCe---eEEEeccCCccceeeeeeecCCccCceEEEEEEEeCCe---EEE-EEcCC Confidence 1334455566666555555553 33344211110 1222221 1 13333333222111 000 00000 Q ss_pred CceEEEEeeccCccccccccceEeecceeeccCcceeeccCCccCCcEEEEEeCCeeeccEeecCCEEEeCCCCCeEEEe Q lcl|Aclame:pro 493 GNEVRYVERMASRQFDAQADAFFVDSGLTYSGEPVSHISGLEHLEGKTVSILADGAVHPQRVVTDGAIDLDVEAGTVHIG 572 (681) Q Consensus 493 g~~~~~ie~~~~~~~~~~~~~~~lD~~~~y~~~~~~~~~gl~~l~G~~v~v~adG~~~~~~~v~~g~i~l~~~~~~v~vG 572 (681) |. | +.||-.. | +- +|.+..-..++ ..+ ..+...+. T Consensus 358 g~----l--------------~~ld~~~-~------------td---------~g~pi~~~~~t-p~~--~~~n~Rvf-- 392 (472) T protein:vir:10 358 SL----L--------------GQLDFAS-S------------AQ---------YEKPQEHVLYT-PLF--KADNARVF-- 392 (472) T ss_pred Ce----E--------------EEEcCcC-c------------CC---------CCceeEEEeec-cce--ecCCCeEE-- Confidence 00 0 0011100 0 00 11111111000 000 01111111 Q ss_pred eecceeEEecceEecCCCcccccceeEEEEEEEEEeccccEEEecCCCeeEEeeeecccccCCcCCcccceEE--EEecC Q lcl|Aclame:pro 573 LPITAELQTLPVAMQLDGSFGQGRVKNINKLWLRVHRSSGIFAGPHADALTEVKQRTSEPYGSPPALKSEEIP--LVLSP 650 (681) Q Consensus 573 ~~y~~~v~~~p~~~~~~~~~~~~~~~~i~rv~l~~~~S~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~tG~~~--v~~~~ 650 (681) . +++..+.|..+.. .++.|+..+.++-.-. +.+.+....+--+.+ ..-. T Consensus 393 ---d-------~el~~~tGvg~~~----~~v~L~wSddg~~~~~--------------~~~~~~~g~~~~~~r~~w~Rl- 443 (472) T protein:vir:10 393 ---D-------FELEASTGVAHIA----DRLFLSATADGLHFGR--------------EQMINQNAPFAYDRRILWRRM- 443 (472) T ss_pred ---E-------EEEEeeCCcCccC----ceEEEEEeccccccch--------------hHHHhhcCccchhheeeehee- Confidence 1 2222222222211 1355555554332111 011111111111111 1111 Q ss_pred CcCc---ceEEEEEECCccCEEEEEEEEE Q lcl|Aclame:pro 651 KWGD---SGQLFVRQADPLPLMIVSMSAE 676 (681) Q Consensus 651 ~~~~---~~~v~I~~~~P~P~tvlai~~e 676 (681) |..+ ..+++|....|.+..++++-+| T Consensus 444 G~ar~~vgf~~rv~~s~pv~~~~~~a~~e 472 (472) T protein:vir:10 444 GRVRKNLGFKVRVITSSPVTLSGCQIRME 472 (472) T ss_pred eccccccceEEEEEEecccccccceeeeC Confidence 1222 3678999999999999999988 No 40 >protein:vir:7329 Length: 825 # NCBI annotation: hypothetical protein # Family: family:all:780 # MgeID: mge:143 # MgeName: epsilon15 # Cross-refs: genbank:acc:NP_848220;genbank:gi:30387391;genbank:GeneID:2641863 Probab=30.19 E-value=1.6 Score=19.47 Aligned_cols=573 Identities=12% Similarity=0.087 Sum_probs=159.7 Q ss_pred hheeeecCCCcCceEEEEEEeCCCC-------eEEEEE---c---CCEEEEEeCCcEEeeCCEEEEEeCCCCchhhceee Q lcl|Aclame:pro 53 FAFVREVKDSAKKVRLIPFTYSVTQ-------TMVIEL---G---AGYFRFHTNGGTLLDGAVPYEIANPYAEADLFNIH 119 (681) Q Consensus 53 ~~~v~~~~~~~~~~rlipf~~~~~~-------~y~lef---g---~~~irv~~~~~~v~~~~~~~~i~TPy~~a~l~~l~ 119 (681) |+ .+++==.|+.++ +.-|+- | -.+|-+.--||..-..|..+--.+++......=|- T Consensus 1 m~-----------~~~~q~sF~~GElsP~l~gR~Dl~~y~~g~~~~~N~~~~p~Gg~~rRpGt~fva~~~~~~~~~rLip 69 (825) T protein:vir:73 1 MA-----------FSWIQPSFAGGEIGPSLYGRIDMSKYQVALRKCDNFIVRQYGGVENRPGTRFVGPAKYPDRKCRLIP 69 (825) T ss_pred Cc-----------cceeccccccceechhhcccchHHHHHHHHHHhcCcEEEecCCceecCchHHhHhhcCCCCCEEEEE Confidence 11 111111233321 000000 0 01111112222211222211111122222222222 Q ss_pred EEEeccEEEEE---cCCcceEE----EEECCCCcEEEEE-----------------Eee-ccCcccccccceeeecCcce Q lcl|Aclame:pro 120 YVQSADVLTLV---HPNYAPRE----LRRLGATNWQLAT-----------------IAF-TSPVATPTSVTATSNNKGTD 174 (681) Q Consensus 120 ~~qsaD~l~lv---h~~~~p~~----l~R~~~~~W~~~~-----------------~~f-~~~~~~~~~~t~t~~~~~~~ 174 (681) |.-+...-|++ +......+ +...+..-|++.. +.| .+....+....... ..+ T Consensus 70 F~fs~~q~y~Lefg~~~lrv~~~gg~v~~~~~~~~e~~TPy~~~~l~~l~~~QsaD~~~i~h~~~pp~~L~r~~---~~~ 146 (825) T protein:vir:73 70 FQFSTVQTYALEFGHNYMRVIKDGAYVLTTSNVIYELAMPYADTDLFRIKFTQSADVLTLVHPAYPPKELRRYA---HDN 146 (825) T ss_pred EEeCCCcEEEEEEeCCeEEEEeCCceEeccCCceEEEecccchhhhhhheeeeecCEEEEEcCCCceeEEEEec---CCC Confidence 22222222221 11111110 1112222233321 000 00000000000000 000 Q ss_pred eeEEEEEEEEEeccceEEecCcccceeccceeccceeeeEEeecc-------CCceeeeeccc---ceeEEEeeccceeE Q lcl|Aclame:pro 175 YTYRYVVTALDAEGKTESAPSSAGTCTNNLFTNGGANTIAWSASS-------GASRYNVYKEQ---GGLYGYIGQTTGTS 244 (681) Q Consensus 175 ~t~~~~v~a~~~~g~~~s~~s~~~t~~~~~~~~~~~~~~~w~a~~-------~~~~~~v~~~~---~~~~~~~~~~~~t~ 244 (681) ... ..+..........+. ......+..+.....++++.. .+....+-... ...|..... .... T Consensus 147 W~l----~~~~f~~gp~~~in~--~~sv~v~asg~tg~~TiTaS~a~~~~~~vG~~i~~~~~~v~si~~~~~~~~-~~~~ 219 (825) T protein:vir:73 147 WQI----VDVTTKNGPFEDINV--DETVKVYASASTGTITLTASSAIFGAEQVGKLFYLEQPAVDSVPVWETSKT-TAIN 219 (825) T ss_pred cEE----EEEeccCCccccccc--cccceeeecccCceeEEEeeccccCchhcCeEEEEecccccccceeeeeeE-EEee Confidence 000 000000000000000 000111122222223333322 12222211111 001110000 0000 Q ss_pred EEec---------------cccccccccccccccCccccCCceeEEEEEcCeEEEEecCCCccEEE---EEeccChhccc Q lcl|Aclame:pro 245 LVDD---------------NIAPDLSVTPPIYDAVFNAAGDYPAAVSYFEQRRCFAGTTNKPQNIW---MTRSGTESAMS 306 (681) Q Consensus 245 ~~~~---------------~~~~~~~~~~~~~~~~~s~~~g~p~~v~f~~~RL~~~~~~~~p~~v~---~S~~gd~~nF~ 306 (681) .... .+.+....+..|..........-....-+++..-.... -..++ ...+++=.+|. T Consensus 220 ~v~~~~~~~~~~~~~~~~~t~~~~a~~g~~~~~~~g~~~~~~~~~~~~~~~~~g~~~----it~~~~~~~~~~~~~~~~~ 295 (825) T protein:vir:73 220 DVRRADSNYYRANTSGKTGTLRPSHTEGMSWDGWGGTGSDDTGIQWEYLHSGFGIAK----ITAVAGDGLTATADVVSFI 295 (825) T ss_pred eEEECCCceeeeecccccceeeccccCCceeEeeeeecccCCceEEEEEecCCceEE----Eeeccccceeeccccceec Confidence 0000 00000000111100000000000000011111100000 00111 12334444444 Q ss_pred ccCCCcCCcc-EEEEEcCCC-ceE-EEEEeecC-cEEEEec--CcEEEEecCCCc--cccccee-------EEEEeeccC Q lcl|Aclame:pro 307 YSLPVRDDDR-VAFRVAARE-ANA-IRHIVPLT-ELLLLTS--SGEWRVASVNSD--AVTPTTI-------SVRPQSYVG 371 (681) Q Consensus 307 ~~~~~~D~D~-i~~~~~~~~-~~~-i~~~~~~~-~Llv~t~--~~e~~~~~~~~~--~ltP~~~-------~~~~~s~~g 371 (681) +...+.+.++ .+.....-. .+. -..+.=++ +|.+..+ ..|+++-+..++ -|.|++. .+...+. . T Consensus 296 ~~~~~~~~~~t~~~~~~~~~~~~gyPs~v~f~q~RL~f~g~~~~p~~v~~Srtgd~~nF~~~~~~~DdD~I~~~~s~~-~ 374 (825) T protein:vir:73 296 PSQVVGSANASYKWAKYAWNSVNGYPSTVVYYQQRLYFAASTAYPQTIWASRTGDYKDFGKNNPIQDDDRIIYTYAGR-Q 374 (825) T ss_pred ccccccCCCCCcccccCCcccCCCCccEEEEEcceEEEeecCCCCCEEEEEccCCccccccCCCCCCCccEEEEEcCC-c Confidence 3222212111 122111110 010 11222233 5666543 234443333222 2444442 1111111 1 Q ss_pred CcccccEEeCCeEEEEEcCCCEEEEEEEeeec-cceeccch--hhhhHHhcCCCCEEEEEEecCCCEEEEEEcCCCeEEE Q lcl|Aclame:pro 372 ATDVQPVVVNNTTIYGAARGGHVRELAYNWQA-NGFVTGDL--SLRAAHLFDNLDILDMAYAKAPQPIVWFISSSGKLLG 448 (681) Q Consensus 372 ~~~~~Pv~vg~~v~fv~~~g~~vre~~~~~~~-~~~~~~dl--t~~~~hl~~~~~~~~~~~~~~p~~~~~~~~~dg~l~~ 448 (681) .+.++=+.-.+.++....++ |+..+... +......+ .....+ +...+.-..--+.++++.+....+.- T Consensus 375 ~~~i~~~~~~~~L~~~t~~~----e~~l~~~~~~~lTP~~~~~~~~s~~-----g~~~~~Pv~vg~~~~Fv~~~g~~vre 445 (825) T protein:vir:73 375 VNEIRHLIDVGNLVALTSGG----EYTISGDQNKVLTPSAFSFSSQGNN-----GSSNVPPIAVANIALFIQEKGSVVRD 445 (825) T ss_pred ceeEEEEeecCcEEEEecCc----eEEEecCCCcccceeeEEEEeeeee-----ccccccceEeCCeEEEEeCCCCeEEE Confidence 22233222233455554544 44433222 22222222 221111 11111111112345555544456666 Q ss_pred EEEeccc------ceEEEEEeccCC-ceEEEEEEeeCCCCEEEEEEEECCCCceEEEEeeccCcc--------------- Q lcl|Aclame:pro 449 LTYVPEQ------QIGAWHQHDTDG-VFESCAVVAEGNEDRLYAVVRRTIGGNEVRYVERMASRQ--------------- 506 (681) Q Consensus 449 ~ty~~~q------~v~aW~~w~~~g-~~~~v~~~~~~~~d~l~~~v~r~~~g~~~~~ie~~~~~~--------------- 506 (681) |.|..++ ++..=++|-+.| .+.+++.... ....+|++. . +|. ..++..+.... T Consensus 446 ~~~~~~~d~~~~~dlt~~a~hl~~~~~~~~~a~~~~-p~~~~~~v~--~-dg~-l~~~ty~~~q~v~aW~~~~~~g~v~~ 520 (825) T protein:vir:73 446 LAYSFDVDGYQGTDLTILANHLFQKHSIVDWSFCIV-PYSSAFCIR--D-DGK-LLVLTYLRDQQVFAWAPQSSAGKYES 520 (825) T ss_pred EEEeeecCceeccchhhhhHhhccCCceEEEEEcCC-CceEEEEEe--c-CCe-EEEEEEeccccceeeEEEecCCcEEE Confidence 6665432 233334566665 3444432211 122333331 1 121 11111111100 Q ss_pred ----ccccccceEe-----------------ecceeeccCcc-------e----e-eccCCccCCcEEEEEeCCeeeccE Q lcl|Aclame:pro 507 ----FDAQADAFFV-----------------DSGLTYSGEPV-------S----H-ISGLEHLEGKTVSILADGAVHPQR 553 (681) Q Consensus 507 ----~~~~~~~~~l-----------------D~~~~y~~~~~-------~----~-~~gl~~l~G~~v~v~adG~~~~~~ 553 (681) .....|.+|+ ++......+.. + . +++|.||+|++|.+++||.+ .. T Consensus 521 ~~~i~~~~~D~l~~iV~R~~~g~~~~yiE~~~~~~~~~~~~~~~vD~g~~~~g~~~~~~l~~l~g~tv~~~~~g~~--~~ 598 (825) T protein:vir:73 521 TCSISEGSEDAVYFVVNRTINGQTVRYIERLSSRLFTNDEDAFFVDCGLSYDGRNTSSRTMTISGGTGDWSYQVDY--PV 598 (825) T ss_pred EEEecCCCccEEEEEEEEeeCCceEEEEEEecccccCCCcceeEEEEEeeecccceeeceeeeCCceEEEEeCCeE--EE Confidence 0001122211 11000000000 0 0 35799999999999999997 68 Q ss_pred eecCCEEEeCCCCCeEEEeeecceeEEecceEecCCCcccccceeEEEEE------EEEEecc--------ccEEEecCC Q lcl|Aclame:pro 554 VVTDGAIDLDVEAGTVHIGLPITAELQTLPVAMQLDGSFGQGRVKNINKL------WLRVHRS--------SGIFAGPHA 619 (681) Q Consensus 554 ~v~~g~i~l~~~~~~v~vG~~y~~~v~~~p~~~~~~~~~~~~~~~~i~rv------~l~~~~S--------~~~~v~~~~ 619 (681) +|.+|.|+++.+. ..+||++|......+++... +..+.++.++ .++.... ..-..+... T Consensus 599 ~v~~g~itl~~~~-~~~i~l~~~~~~~~~~~~~~------~~~~~~i~~~~~~~~v~v~~~~~~~a~~~~~~~t~~~~a~ 671 (825) T protein:vir:73 599 TVSGGAYFVNTDV-GAQIQFPYTGTDPDTNEPVA------KELRGDIISVTSNTAVVVRFNRNVPPVLRNVATTNWQMAR 671 (825) T ss_pred EEcCCeEEecccc-eEEEEecccCccccccccee------ceeeEEEccccCceEEEEEecccccceeeeecccCCCcch Confidence 8899999999876 57999999988776655432 2223333222 2222111 000000000 Q ss_pred Ce---eEEeeeeccccc-CC----cCCcccceEEEEecCCcCcceEEEEEECCccCEEEEEEEEEEEEcC Q lcl|Aclame:pro 620 DA---LTEVKQRTSEPY-GS----PPALKSEEIPLVLSPKWGDSGQLFVRQADPLPLMIVSMSAEIAIGA 681 (681) Q Consensus 620 ~~---~~~~~~~~~~~~-~~----~~~~~tG~~~v~~~~~~~~~~~v~I~~~~P~P~tvlai~~ev~vg~ 681 (681) .. +.-+..++-..+ ++ +.-+-.|.+.++... ..|.| =-|+...|.-+-.|+.-.| T Consensus 672 ~~~~gL~hLeG~~v~v~~Dg~~~~~~~V~~G~vtl~~~~-----~~v~v--Gl~y~~~~~~l~~~~~~~g 734 (825) T protein:vir:73 672 QTFSGLAHLEGQTVNILSDASVEPQKTVTGGAVTLESPG-----AVVHI--GLPITAEFETLDININGQE 734 (825) T ss_pred heeccccccCCceEEEEECCeeeCCeEecCcEEEecCCc-----eEEEE--eeCccceEEecccccCCCc Confidence 00 000000000000 00 111224555554321 12221 1122223322222221111 No 41 >protein:vir:2109 Length: 472 # NCBI annotation: head completion protein # Family: family:all:1540 # MgeID: mge:46 # MgeName: P22 # Cross-refs: genbank:acc:NP_059633;genbank:gi:9635541;genbank:GeneID:1262840 Probab=29.18 E-value=1.7 Score=19.35 Aligned_cols=433 Identities=11% Similarity=0.048 Sum_probs=163.0 Q ss_pred EEcCCcceEEEEEC-----CCCcEEEEEEeeccCcccccccceeeecCcceeeEEEEEEEEEeccceEEecCcccceecc Q lcl|Aclame:pro 129 LVHPNYAPRELRRL-----GATNWQLATIAFTSPVATPTSVTATSNNKGTDYTYRYVVTALDAEGKTESAPSSAGTCTNN 203 (681) Q Consensus 129 lvh~~~~p~~l~R~-----~~~~W~~~~~~f~~~~~~~~~~t~t~~~~~~~~t~~~~v~a~~~~g~~~s~~s~~~t~~~~ 203 (681) ++..+.|..+-... +-.+|...+ +.+.|... ......+..++ |......- .+....- T Consensus 1 m~~~q~Pl~~g~~~~~~~~d~~~~~pVN--~~a~~~~~-----------~~s~~~lr~tP----G~~~~~~~-~g~~RG~ 62 (472) T protein:vir:21 1 MPIQQLPMMKGMGKDFKNADYIDYLPVN--MLATPKEI-----------LNSSGYLRSFP----GITKRYDM-NGVSRGV 62 (472) T ss_pred CceEEeeccccccccccccceeeeeeee--eeeeccCC-----------cccceeeeecC----CcceeccC-CCceeee Confidence 22223333221111 111222211 11111110 00111111100 00000000 0000000 Q ss_pred ceeccceeeeEEeeccCCceeeeeccccee-----EEEeeccceeEEEecccc-----c---cccccccccccCccccCC Q lcl|Aclame:pro 204 LFTNGGANTIAWSASSGASRYNVYKEQGGL-----YGYIGQTTGTSLVDDNIA-----P---DLSVTPPIYDAVFNAAGD 270 (681) Q Consensus 204 ~~~~~~~~~~~w~a~~~~~~~~v~~~~~~~-----~~~~~~~~~t~~~~~~~~-----~---~~~~~~~~~~~~~s~~~g 270 (681) .+ ++.......+.|..-|.+......+ ...............+.. . .+..+.+.....+...-+ T Consensus 63 ~~---~t~~~~ly~V~G~~LY~v~~~~G~i~gsgrVsMa~n~~~~~v~~~~~~~~Y~~~~~~~t~~~~~~d~~f~~~dl~ 139 (472) T protein:vir:21 63 EY---NTAQNAVYRVCGGKLYKGESEVGDVAGSGRVSMAHGRTSQAVGVNGQLVEYRYDGTVKTVSNWPADSGFTQYELG 139 (472) T ss_pred ee---cccCCeEEEEeCCceEEEeeeeeeecccccEEEeeCCeEEEEEECCceeEEEEecchhhhhcccCcccccccccc Confidence 00 0000111222222222221110000 000000000000000000 0 000111111111111224 Q ss_pred ceeEEEEEcCeEEEEecCCCccEEEEEeccChhcccccCCCcCCccE-EEEEcCCCceEEEEEeecC-cEEEEecCcE-- Q lcl|Aclame:pro 271 YPAAVSYFEQRRCFAGTTNKPQNIWMTRSGTESAMSYSLPVRDDDRV-AFRVAAREANAIRHIVPLT-ELLLLTSSGE-- 346 (681) Q Consensus 271 ~p~~v~f~~~RL~~~~~~~~p~~v~~S~~gd~~nF~~~~~~~D~D~i-~~~~~~~~~~~i~~~~~~~-~Llv~t~~~e-- 346 (681) -+..|+|..+|++|.- + .-+..+.|..-|-+ +-|.. .++-+..+++.|.-++..+ .|++|.+..- T Consensus 140 ~~~dv~f~dGyfV~~~-~-gt~~f~is~l~d~~---------~~~~y~~FatAE~~pD~Iv~i~~~~~~l~lfG~~TiEv 208 (472) T protein:vir:21 140 SVRDITRLRGRYAWSK-D-GTDSWFITDLEDES---------HPDRYSAQYRAESQPDGIIGIGTWRDFIVCFGSSTIEY 208 (472) T ss_pred ceeEEEEecceEEEcc-C-CcceeEEecCCCCc---------cccCCccceeeccCCCceEEEEeeccEEEEEeccceEE Confidence 4457999999987762 1 11233333333311 11222 2566777888888888875 5888888765 Q ss_pred EEEecCCCcccccceeEEEEee----ccCCcc-cccEEeCCeEEEEEcCCCEEEEEEEeeeccceeccchhh-hhHHhcC Q lcl|Aclame:pro 347 WRVASVNSDAVTPTTISVRPQS----YVGATD-VQPVVVNNTTIYGAARGGHVRELAYNWQANGFVTGDLSL-RAAHLFD 420 (681) Q Consensus 347 ~~~~~~~~~~ltP~~~~~~~~s----~~g~~~-~~Pv~vg~~v~fv~~~g~~vre~~~~~~~~~~~~~dlt~-~~~hl~~ 420 (681) |..+|.. ++..+-+.+++ ..||.. =.=+.+|++++|+...+..- ..-+..++|+++=||- -++..++ T Consensus 209 w~ntG~a----d~~~fpy~r~~g~~iq~Gcaa~~sv~~~~~s~~~l~~~~~g~---~~V~~~~g~qa~rIST~aIE~~i~ 281 (472) T protein:vir:21 209 FSLTGAT----TAGAALYVAQPSLMVQKGIAGTYCKTPFADSYAFISHPATGA---PSVYIIGSGQASPIATASIEKIIR 281 (472) T ss_pred EEecCCC----CcCcCceEEcCcceeeecccCcchhhecCceEEEEecCCCcc---cEEEEccCceeEEecCHHHHHHHH Confidence 7776642 33334455554 468753 34567899999999877421 0112335667766643 2333443 Q ss_pred CC------CEEEEEEecCCCEEEEEEcCCCeEEEEEEec--ccceEEEEEeccCC---ceEEEEEEeeCCCCEEEEEEEE Q lcl|Aclame:pro 421 NL------DILDMAYAKAPQPIVWFISSSGKLLGLTYVP--EQQIGAWHQHDTDG---VFESCAVVAEGNEDRLYAVVRR 489 (681) Q Consensus 421 ~~------~~~~~~~~~~p~~~~~~~~~dg~l~~~ty~~--~q~v~aW~~w~~~g---~~~~v~~~~~~~~d~l~~~v~r 489 (681) .. .-...+|+.+-+.+..+...|. .+.|+- .|.-.-||.-+.++ ..+.++.+.-.+. +++=- T Consensus 282 ~y~~~e~~~A~~~t~~~eGH~fy~LtfP~~---Tw~yD~at~~~~e~W~~~~sg~~~~~~R~~~~~~~~g~---~ivGD- 354 (472) T protein:vir:21 282 SYTAEEMATGVMETLRFDSHELLIIHLPRH---VLVYDASSSQNGPQWCVLKTGLYDDVYRGVDFMYEGNQ---ITCGD- 354 (472) T ss_pred hcCCccccceEEEEEEeCCeEEEEEEcCCe---eEEEEcccCccCceeeeeccCCCcCceeEEEEEeeCCe---EEEEE- Confidence 32 2345567777777777776664 344542 22222388877753 2455555433211 11111 Q ss_pred CCCCceEEEEeeccCccccccccceEeecceeeccCcceeeccCCccCCcEEEEEeCCeeeccEeecCCEEEeCCCCCeE Q lcl|Aclame:pro 490 TIGGNEVRYVERMASRQFDAQADAFFVDSGLTYSGEPVSHISGLEHLEGKTVSILADGAVHPQRVVTDGAIDLDVEAGTV 569 (681) Q Consensus 490 ~~~g~~~~~ie~~~~~~~~~~~~~~~lD~~~~y~~~~~~~~~gl~~l~G~~v~v~adG~~~~~~~v~~g~i~l~~~~~~v 569 (681) ..||. .|+-.++... |.|. +.+.-..+.+-+.++. .+ T Consensus 355 ~~nG~--ly~L~fd~~~--------~~d~-----~~~~~r~~p~~~~dn~----------------------------R~ 391 (472) T protein:vir:21 355 KSEAV--VGQLQFDISS--------QYDK-----QQEHLLFTPLFKADNA----------------------------RC 391 (472) T ss_pred cCCCe--EEEEEecccc--------cCCC-----cCcEEEEccceeCCCC----------------------------EE Confidence 11221 1111111111 1110 0000011111111111 11 Q ss_pred EEeeecceeEEecceEecCCCcccccceeEEEEEEEEEeccccEEEecCCCeeEEeeeecccccCCcCCcccceEEEEec Q lcl|Aclame:pro 570 HIGLPITAELQTLPVAMQLDGSFGQGRVKNINKLWLRVHRSSGIFAGPHADALTEVKQRTSEPYGSPPALKSEEIPLVLS 649 (681) Q Consensus 570 ~vG~~y~~~v~~~p~~~~~~~~~~~~~~~~i~rv~l~~~~S~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~tG~~~v~~~ 649 (681) . ..+++ ...|..+.. .++.|+..+- |...+.+. +.. . + .+-.+.-.....-. T Consensus 392 f-----d~eve-------~~~Gv~q~~----d~v~L~wSdd-G~~~~~~~--~~~--~------g-~~g~~~tr~~~~Rl 443 (472) T protein:vir:21 392 F-----DLEVE-------SSTGVAQYA----DRLFLSATTD-GINYGREQ--MIE--Q------N-EPFVYDKRVLWKRV 443 (472) T ss_pred E-----EEeee-------ccCCCCCcC----cEEEEEeecc-ccccccce--eec--c------C-Cccchhcceeeeee Confidence 1 12221 122222222 2567776664 33332211 010 0 0 01111112222222 Q ss_pred CCcCcceEEEEEECCccCEEEEEEEEEEE Q lcl|Aclame:pro 650 PKWGDSGQLFVRQADPLPLMIVSMSAEIA 678 (681) Q Consensus 650 ~~~~~~~~v~I~~~~P~P~tvlai~~ev~ 678 (681) |.--+....+|+-..|.|.+|.++..+++ T Consensus 444 G~~r~~v~f~~r~~~~~~~~l~g~~~~~E 472 (472) T protein:vir:21 444 GRIRRLIGFKLRVITKSPVTLSGCQIRLE 472 (472) T ss_pred eecccceeEEEEEEecCcceeeeeEEeeC Confidence 21113334667767788888888888888 No 42 >protein:vir:100960 Length: 472 # NCBI annotation: gp10 # Family: family:all:1540 # MgeID: mge:1509 # MgeName: ST104 # Cross-refs: genbank:acc:YP_006412;genbank:gi:46358704;genbank:GeneID:2777110 Probab=25.71 E-value=2 Score=18.90 Aligned_cols=432 Identities=10% Similarity=0.047 Sum_probs=158.7 Q ss_pred EEcCCcceEE-EEE---CC-CCcEEEEEEeeccCcccccccceeeecCcceeeEEEEEEEEEeccceEEecCcccceecc Q lcl|Aclame:pro 129 LVHPNYAPRE-LRR---LG-ATNWQLATIAFTSPVATPTSVTATSNNKGTDYTYRYVVTALDAEGKTESAPSSAGTCTNN 203 (681) Q Consensus 129 lvh~~~~p~~-l~R---~~-~~~W~~~~~~f~~~~~~~~~~t~t~~~~~~~~t~~~~v~a~~~~g~~~s~~s~~~t~~~~ 203 (681) +...+.|..+ +.+ .+ ..+|...+ +.+.+...-+.. .....++.-..- .+ .+...... T Consensus 1 m~~~~ipl~~g~~~~~~~a~~~~~~pvn--~y~~~~~~~~ss-----------~~Lr~~pG~~~~-a~-~~G~~RG~--- 62 (472) T protein:vir:10 1 MPIQQLPMMKGMGKDFKNADYIDYLPIN--MLATPKEVLNSS-----------GYLRSFPGIAKR-ND-VNGVSRGV--- 62 (472) T ss_pred CceeecccccccccCCCcCcceeeeeec--cccccccccccc-----------cceeecccceee-cC-CCCcccce--- Confidence 1111222211 111 11 11222111 111111100000 000000000000 00 00000000 Q ss_pred ceeccceeeeEEeeccCCceeeeeccccee-----EEEeeccceeEEEecccc--------ccccccccccccCccccCC Q lcl|Aclame:pro 204 LFTNGGANTIAWSASSGASRYNVYKEQGGL-----YGYIGQTTGTSLVDDNIA--------PDLSVTPPIYDAVFNAAGD 270 (681) Q Consensus 204 ~~~~~~~~~~~w~a~~~~~~~~v~~~~~~~-----~~~~~~~~~t~~~~~~~~--------~~~~~~~~~~~~~~s~~~g 270 (681) .+ .........+.+..-|.+....+.+ ...............+.. ..+..+.+.....+...-+ T Consensus 63 ~~---~~~~~~ly~V~G~~Ly~v~~~iG~i~gsgrVsMa~n~~~~~v~~~~~~~~Y~~~~~~~t~~~~~~d~~f~~~dl~ 139 (472) T protein:vir:10 63 EY---NTAQNAVYRVCGGKLYKGEAVVGDVAGSGRVSMAHGRTSQAVGVNGQLIEYRYDGAVKTVSNWPADSGFTQYELG 139 (472) T ss_pred ee---eeeCCeEEEEeCcceEEEEeeEeeccCcccEEEeeCCeEEEEEECCceeEEEEecchhhhhcccCcccccccccc Confidence 00 0000011112222222211100000 000000000000000000 0001111111111112234 Q ss_pred ceeEEEEEcCeEEEEecCCCccEEEEEeccChhcccccCCCcCCccEE-EEEcCCCceEEEEEeecC-cEEEEecCcE-- Q lcl|Aclame:pro 271 YPAAVSYFEQRRCFAGTTNKPQNIWMTRSGTESAMSYSLPVRDDDRVA-FRVAAREANAIRHIVPLT-ELLLLTSSGE-- 346 (681) Q Consensus 271 ~p~~v~f~~~RL~~~~~~~~p~~v~~S~~gd~~nF~~~~~~~D~D~i~-~~~~~~~~~~i~~~~~~~-~Llv~t~~~e-- 346 (681) -+..|+|..+|++|.- ..-+.++.|...|-+ +-|+.+ ++.+..+++.|.-++..+ .|++|.+..- T Consensus 140 ~~~dv~f~dGyfV~~~--~gt~~~~iS~l~d~~---------~~~~y~~fa~AE~~pD~Ivgi~~~~~~l~lfG~~TiEv 208 (472) T protein:vir:10 140 SVRDITRLRGRYAWSK--DGTDSWFITDLEDES---------HPDRYSAEYRAESQPDGIIGIGSWRDFIVCFGSSTIEY 208 (472) T ss_pred ceeEEEEecceEEEcc--CCCceEEEeccCCcc---------ccccccccccccCCCCceEEEEeeccEEEEEeccceEE Confidence 4568999999987772 122345555544422 122322 455777888888888875 5888888765 Q ss_pred EEEecCCCcccccceeEEEEee----ccCCcc-cccEEeCCeEEEEEcCCCEEEEEEEeeeccceeccchhh-hhHHhcC Q lcl|Aclame:pro 347 WRVASVNSDAVTPTTISVRPQS----YVGATD-VQPVVVNNTTIYGAARGGHVRELAYNWQANGFVTGDLSL-RAAHLFD 420 (681) Q Consensus 347 ~~~~~~~~~~ltP~~~~~~~~s----~~g~~~-~~Pv~vg~~v~fv~~~g~~vre~~~~~~~~~~~~~dlt~-~~~hl~~ 420 (681) |..+|.. ++..+-+.+++ ..||.. =.=+.+|++++|+...+..- ..-+..++|+++=||- -++..++ T Consensus 209 w~ntG~a----d~~~fpy~r~~g~~i~~Gcaa~~sv~~~~~s~~~l~~~~~g~---~~V~~~~g~qa~rIST~aIE~~i~ 281 (472) T protein:vir:10 209 FSLTGAT----TVGAALYVAQPSLMVQKGIAGTYCKTPFADSYAFISHPATGA---PSVYIIGSGQASPIATASIEKIIR 281 (472) T ss_pred EEecCCC----CcCcCceEEcCcceeeecccCcchhhecCceEEEEecCCCcc---cEEEEccCceeEEecCHHHHHHHH Confidence 7776642 33334455554 468753 34567899999999877421 0112335667766643 2333443 Q ss_pred CC------CEEEEEEecCCCEEEEEEcCCCeEEEEEEecc--cceEEEEEeccCC---ceEEEEEEeeCCCCEEEEEEEE Q lcl|Aclame:pro 421 NL------DILDMAYAKAPQPIVWFISSSGKLLGLTYVPE--QQIGAWHQHDTDG---VFESCAVVAEGNEDRLYAVVRR 489 (681) Q Consensus 421 ~~------~~~~~~~~~~p~~~~~~~~~dg~l~~~ty~~~--q~v~aW~~w~~~g---~~~~v~~~~~~~~d~l~~~v~r 489 (681) .. .-...+|+.+-+.+..+...|. .+.|+-. |.-.-|+.-+.++ ..+.++.+.-.+. +++=- T Consensus 282 ~y~~~e~~~A~~~t~~~~GH~fy~LtfP~~---Tw~yD~at~~w~erw~~~~~g~~~~~~R~~~~~~~~g~---~ivGD- 354 (472) T protein:vir:10 282 SYTAEELATGVMETLRFDSHELLIIHLPRH---VLVYDASSSQNGPQWCVLKTGLYDDVYRAVDFMYEGNQ---ITCGD- 354 (472) T ss_pred hcCCccccceEEEEEEeCCeEEEEEEcCCe---eEEEEcccCcccceeeeecCCCcccceeEEEEEeeCCe---EEEEE- Confidence 32 2345567777777766666654 3444422 2211255555443 2444444432211 11111 Q ss_pred CCCCceEEEEeeccCccccccccceEeecceee-ccCcceeeccCCccCCcEEEEEeCCeeeccEeecCCEEEeCCCCCe Q lcl|Aclame:pro 490 TIGGNEVRYVERMASRQFDAQADAFFVDSGLTY-SGEPVSHISGLEHLEGKTVSILADGAVHPQRVVTDGAIDLDVEAGT 568 (681) Q Consensus 490 ~~~g~~~~~ie~~~~~~~~~~~~~~~lD~~~~y-~~~~~~~~~gl~~l~G~~v~v~adG~~~~~~~v~~g~i~l~~~~~~ 568 (681) ..||. .| .||-.... .|.+....--.+++. .+... T Consensus 355 ~~nG~--ly----------------~ld~~~~t~~g~~~~~~~~~p~l~--------------------------~dn~R 390 (472) T protein:vir:10 355 KSEAL--TG----------------QLQFDISSQYGLQQEHLLFTPLFK--------------------------ADNAR 390 (472) T ss_pred cCCCe--EE----------------EEecccCCCCCCcccceEEccccc--------------------------CCCCE Confidence 11111 01 11111100 011111000011110 01111 Q ss_pred EEEeeecceeEEecceEecCCCcccccceeEEEEEEEEEeccccEEEecCCCeeEEeeeecccccCCcCCcccceEEEEe Q lcl|Aclame:pro 569 VHIGLPITAELQTLPVAMQLDGSFGQGRVKNINKLWLRVHRSSGIFAGPHADALTEVKQRTSEPYGSPPALKSEEIPLVL 648 (681) Q Consensus 569 v~vG~~y~~~v~~~p~~~~~~~~~~~~~~~~i~rv~l~~~~S~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~tG~~~v~~ 648 (681) +. ..+++ ...|..+.. +++.|+..+- |...+.+. +.. . + .+-.+.-.....- T Consensus 391 ~~-----d~eve-------~~~Gv~~~~----d~v~L~wSdd-G~~~~~~~--~~~--~------g-~~g~~~tr~~~~R 442 (472) T protein:vir:10 391 CF-----DLEVE-------SSTGVAQYA----DRLFLSATTD-GINYGREQ--MIE--Q------N-EPFVYDKRVIWKR 442 (472) T ss_pred EE-----EEeee-------ccCCCCCcC----cEEEEEeecc-ccccccce--eec--c------C-Cccchhcceeeee Confidence 11 12222 122222222 2567776664 33332211 000 0 0 0111111222222 Q ss_pred cCCcCcceEEEEEECCccCEEEEEEEEEEE Q lcl|Aclame:pro 649 SPKWGDSGQLFVRQADPLPLMIVSMSAEIA 678 (681) Q Consensus 649 ~~~~~~~~~v~I~~~~P~P~tvlai~~ev~ 678 (681) .|.--+....+|+-..|.|.+|.++..+++ T Consensus 443 lG~~r~~v~f~~r~~~~~~~~l~g~~~~~E 472 (472) T protein:vir:10 443 VGRIRRLIGFKLRVITKSPVTLSGCQIRLE 472 (472) T ss_pred eeecccceeEEEEEEecCcceeeeeEEeeC Confidence 221113334667767788888888888888 No 43 >protein:vir:95324 Length: 823 # NCBI annotation: hypothetical protein # Family: family:all:780 # MgeID: mge:1564 # MgeName: phiV10 # Cross-refs: genbank:acc:YP_512269;genbank:gi:89152436;genbank:GeneID:3952993 Probab=22.37 E-value=2.5 Score=18.44 Aligned_cols=595 Identities=10% Similarity=0.043 Sum_probs=176.4 Q ss_pred hhccE--EeeccC-----eeeCCchheee-ecCCCcCceEEEE---EEeCCCCeEEEEEc--CCEEEEEeCCcEEeeCCE Q lcl|Aclame:pro 36 CRNFV--VKPQGP-----AENRAGFAFVR-EVKDSAKKVRLIP---FTYSVTQTMVIELG--AGYFRFHTNGGTLLDGAV 102 (681) Q Consensus 36 ~~N~~--~~~~Gg-----~~rRpG~~~v~-~~~~~~~~~rlip---f~~~~~~~y~lefg--~~~irv~~~~~~v~~~~~ 102 (681) |+--+ .--.|| +..|.=..-+. +++.. ..+...| ...=.+-.|+-+.. ++..|+.- ..-+.+. T Consensus 1 m~i~~~q~sF~~GElsP~l~gR~Dl~ry~~q~~~~-~N~~~~~~GGl~rRpGt~fva~~~~~~g~~rLip---f~~s~~q 76 (823) T protein:vir:95 1 MAISWIQPSFAGGEIGPSLYGRIDMAKYQVALRKC-DNFIVRQYGGVENRPGTRFVGAAKYPNRKCRLIP---FQFSTVQ 76 (823) T ss_pred CcceeechhccCceechheeccchHHHHHHHHhhh-hCcEeeecCCceecCchhhhhhhcCCCCCeeEEE---EEeCCCc Confidence 22111 111355 44454432111 11100 0000011 01111112221111 12222110 0001111 Q ss_pred EEEEeCCCCchhhceeeEEEeccEEEEEcCCcceEEEEE-CC-C-----CcEEEEEEeeccCcc-cccccceeeecCcce Q lcl|Aclame:pro 103 PYEIANPYAEADLFNIHYVQSADVLTLVHPNYAPRELRR-LG-A-----TNWQLATIAFTSPVA-TPTSVTATSNNKGTD 174 (681) Q Consensus 103 ~~~i~TPy~~a~l~~l~~~qsaD~l~lvh~~~~p~~l~R-~~-~-----~~W~~~~~~f~~~~~-~~~~~t~t~~~~~~~ 174 (681) .|-+.- +. ..|++.- |--+++...-++.++.- +. . .-.+..++.|-..+. .+...... .... T Consensus 77 ~y~Lef--g~---~~irV~~--~~g~vv~~~~~~~ev~tPy~~~~l~~Lr~~qsaD~~fivh~~~~p~~L~r~---~~~~ 146 (823) T protein:vir:95 77 TYALEF--GH---QYMRVIK--DGALVLNSSNVIYEIATPYTEADLFRIKFTQSADVLTLVHPAYPPKELRRY---AHDN 146 (823) T ss_pred EEEEEE--cC---CeEEEEe--CCcEEEecCCceeEEecccccccccceeEEEeccEEEEEcCCccceEEEec---CCCC Confidence 111110 00 1122211 11122333333333321 00 0 001111222221111 11111000 0000 Q ss_pred eeEEEEEEE---EEeccceEEecCcccceeccce---eccceeeeEEeeccCCceeeeecccce---eEEEe--ecccee Q lcl|Aclame:pro 175 YTYRYVVTA---LDAEGKTESAPSSAGTCTNNLF---TNGGANTIAWSASSGASRYNVYKEQGG---LYGYI--GQTTGT 243 (681) Q Consensus 175 ~t~~~~v~a---~~~~g~~~s~~s~~~t~~~~~~---~~~~~~~~~w~a~~~~~~~~v~~~~~~---~~~~~--~~~~~t 243 (681) .......+. ....... ...+...... .....+...|.+...+..+.+...... .|... ...... T Consensus 147 w~l~~~~~~~gp~~~~~~~-----~t~~v~~~~~~~~~t~ta~~~~~~~d~vg~~~~l~~~~~~~~~~~~~~~~~~~~~~ 221 (823) T protein:vir:95 147 WQLVDVVTKNGPFEDINID-----ESLTVYASASTGTITLTASASIFGAEQVGKLFYLEQPAVDSVPVWETSKSTSIGDI 221 (823) T ss_pred ceEEEEEEecccccccccc-----ceeEEeccccCceeEEeecccccchhhccceEEEeccccceeeecceeeeecccce Confidence 011110000 0000000 0000000000 000001111222222222221111100 00000 000000 Q ss_pred EEEeccccccccc------------cccccccCccccCCceeEEEEEcCeEEEEecCCCccEEEEEeccChh--cccccC Q lcl|Aclame:pro 244 SLVDDNIAPDLSV------------TPPIYDAVFNAAGDYPAAVSYFEQRRCFAGTTNKPQNIWMTRSGTES--AMSYSL 309 (681) Q Consensus 244 ~~~~~~~~~~~~~------------~~~~~~~~~s~~~g~p~~v~f~~~RL~~~~~~~~p~~v~~S~~gd~~--nF~~~~ 309 (681) .....+...+..+ +..|.....+... +..+. -|..-.+....+.+-..+.+++-. -|.+.. T Consensus 222 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~--~~~~~---~~~~~~~~g~~~~t~v~~~~~~~~~~~~~~~~ 296 (823) T protein:vir:95 222 RRADSNYYRAVTAGKTGTLRPSHTEGTSWDGWGGSGDD--DTGIE---WEYLHSGFGIARITAVNGTTATAEVISYIPSQ 296 (823) T ss_pred EEecccceeeeeccccceeecccCCcceEEeceecccc--cceeE---EEEEeCCcceEEEEeecceeeeceEeeeeccc Confidence 0000011101000 0001000000000 11110 022112111111222222222211 111111 Q ss_pred CCcC-CccEEEEE---c--CCCceEEEEEeec-CcEEEEecC--cEEEEecCCCc--cccccee-------EEEEeeccC Q lcl|Aclame:pro 310 PVRD-DDRVAFRV---A--AREANAIRHIVPL-TELLLLTSS--GEWRVASVNSD--AVTPTTI-------SVRPQSYVG 371 (681) Q Consensus 310 ~~~D-~D~i~~~~---~--~~~~~~i~~~~~~-~~Llv~t~~--~e~~~~~~~~~--~ltP~~~-------~~~~~s~~g 371 (681) ...+ +......- + ...+ ..+.=+ ++|.++... -|+++-+..++ -|.|++. .+...+. - T Consensus 297 ~~~~~~~t~~~~~~~~~~~~g~P---s~v~f~q~RL~f~g~~~~p~~v~~Srtgd~~nF~~~~~~~DdD~I~~~~s~~-~ 372 (823) T protein:vir:95 297 VVGEDNASYKWAKYAWNSVNGYP---GTVVYYQQRLYFAASTAFPQTIWASRTGDYKDFGKSNPTQDDDRIIYTYAGR-Q 372 (823) T ss_pred cccCCcCCccccccccCcCCCCc---cEEEEEeceEEEEEcCCCCcEEEEeccCCccccccccCCCCCCcEEEEEcCC-c Confidence 1111 11111111 1 1111 222223 356666553 25544443222 2333321 1111111 1 Q ss_pred CcccccEEeCCeEEEEEcCCCEEEEEEEeeec-cceeccchh--hhhHHhcCCCCEEEEEEecCCCEEEEEEcCCCeEEE Q lcl|Aclame:pro 372 ATDVQPVVVNNTTIYGAARGGHVRELAYNWQA-NGFVTGDLS--LRAAHLFDNLDILDMAYAKAPQPIVWFISSSGKLLG 448 (681) Q Consensus 372 ~~~~~Pv~vg~~v~fv~~~g~~vre~~~~~~~-~~~~~~dlt--~~~~hl~~~~~~~~~~~~~~p~~~~~~~~~dg~l~~ 448 (681) .+.++=+.-.+.++....++ |+..+... +......++ ....+ +...+.-..--+.++++.+....+.- T Consensus 373 ~~~i~~~v~~~~Lli~t~~~----e~~l~~~~~~~lTP~~~~~~~~s~~-----g~~~~~Pv~vg~~~~Fv~~~g~~vre 443 (823) T protein:vir:95 373 VNEIRHLIDVGSLVALTSGG----EYVITGDQNKVLTPSSFAFSSQGSN-----GSSNVPPIAVANIALFVQEKGSVVRD 443 (823) T ss_pred ceEEEEEeecCcEEEEecCc----EEEEEcCCCcccceeeEEEEEeecc-----ccccccceEeCCeEEEEecCCCEEEE Confidence 22333222234455555544 33333222 222222222 11111 11111111122345555544446666 Q ss_pred EEEeccc------ceEEEEEeccCC-ceEEEEEEeeCCCCEEEEEEE--------------------ECCCCceEEEEee Q lcl|Aclame:pro 449 LTYVPEQ------QIGAWHQHDTDG-VFESCAVVAEGNEDRLYAVVR--------------------RTIGGNEVRYVER 501 (681) Q Consensus 449 ~ty~~~q------~v~aW~~w~~~g-~~~~v~~~~~~~~d~l~~~v~--------------------r~~~g~~~~~ie~ 501 (681) |.|..++ ++.-=+.|-+.| .+.++|.... ....+|++.. ...+|.... +-. T Consensus 444 ~~~~~~~d~~~~~dlT~~a~hl~~~~~i~~~a~~~~-p~~~~~~v~~dG~l~~~ty~~~q~v~aW~~~~~~g~~~~-~~~ 521 (823) T protein:vir:95 444 LAYSFDVDGYQGNDLTILANHLFQKHSIVDWCFSIV-PYSSAFCIRDDGKLLVMTYLRDQQVFAWAPQSSTGKYES-TCS 521 (823) T ss_pred EEEeeecCceecchhhhhhhhhcCCCceEEEEEecC-CCeEEEEEecCCcEEEEEEecccceeeeEEEecCCcEEE-EEE Confidence 6664332 233334555554 2333332211 1223333211 111111110 000 Q ss_pred ccCccccccccceE--------------eecc---eeeccCcc------eee----------------ccCCccCCcEEE Q lcl|Aclame:pro 502 MASRQFDAQADAFF--------------VDSG---LTYSGEPV------SHI----------------SGLEHLEGKTVS 542 (681) Q Consensus 502 ~~~~~~~~~~~~~~--------------lD~~---~~y~~~~~------~~~----------------~gl~~l~G~~v~ 542 (681) + .+..+|.+| +-.. .....+.. .+. .++.|++|++|. T Consensus 522 i----~~~~~d~l~~~v~R~i~g~~~~yiE~~~~~~~~~~~~~~~lD~~~s~~g~~~~~~~~~l~~g~~~l~~l~g~~v~ 597 (823) T protein:vir:95 522 I----SEGNEDAVYFVVNRTVNGQTVRYIERLSSRLFTSDEDAFFVDSGLSYDGRNTSDRTMTITGGSGEWDYLAEYTIS 597 (823) T ss_pred e----cCCCCCEEEEEEEeccCCeEEEEEEeeccccCCCccceeEEEEEEEeecCcccceeeEecCCCCcccccCceEEE Confidence 0 000112211 1110 00000000 011 137899999987 Q ss_pred EEeCCeeeccEeecCCEEEeCCCCCeEEEeeecceeEEecceEecCCCcccccceeEEEEEEEEEeccccEEEecCCCee Q lcl|Aclame:pro 543 ILADGAVHPQRVVTDGAIDLDVEAGTVHIGLPITAELQTLPVAMQLDGSFGQGRVKNINKLWLRVHRSSGIFAGPHADAL 622 (681) Q Consensus 543 v~adG~~~~~~~v~~g~i~l~~~~~~v~vG~~y~~~v~~~p~~~~~~~~~~~~~~~~i~rv~l~~~~S~~~~v~~~~~~~ 622 (681) + +||.++....+ +++|+|+++.+.+++|++|+++++++++++..+ +....+..++....++...+.+... ..... T Consensus 598 ~-adg~~~~~~~v-~g~i~l~~~~~~~~vGl~~~~~i~~~~~~v~~~-~a~~~~~~r~v~a~l~~~~t~~~~~--~~~~~ 672 (823) T protein:vir:95 598 V-SGGAYFTSSDV-GAQLQFPYTGADPDTGYEVSKELRCDIISVTSN-TAVVVRANRNVPPSLRNVATTNWQM--ARRTF 672 (823) T ss_pred e-cCcceECCccc-eeEEEeCcCCCccccccceEEEEEEeeceeeCC-ceEEEccCCcccceeeeeecccccc--cccee Confidence 6 99999888777 799999999999999999999999999888544 4455555666666666655444221 11111 Q ss_pred EEeeeecc---cc-cCCc--C--CcccceEEEEecCCcCcceEEEE--E-ECCccCEEEEE-------------EEEEE- Q lcl|Aclame:pro 623 TEVKQRTS---EP-YGSP--P--ALKSEEIPLVLSPKWGDSGQLFV--R-QADPLPLMIVS-------------MSAEI- 677 (681) Q Consensus 623 ~~~~~~~~---~~-~~~~--~--~~~tG~~~v~~~~~~~~~~~v~I--~-~~~P~P~tvla-------------i~~ev- 677 (681) ..+.+..+ .. .++. | -+..|.+.++... ....+-| + --.|+|+.+.+ +...+ T Consensus 673 ~gL~hleg~tv~v~~dg~~~~~~~v~~G~vtl~~~~---~~v~vGl~~~~~~~~l~~~~~~~g~~~g~~~ri~~~~~~~~ 749 (823) T protein:vir:95 673 GGLSHLEGQTVNILSDANVEPQKVVSGGAVTLESPG---AVVHIGLPITAEFETLDININGQETLLDKKQVIPSVTLVVN 749 (823) T ss_pred eeccccccceEEEEEcCeeeCCeEecCCEEEecCCC---CEEEEeecceeeEEecchhcCCCcccCCceeEEeEEEEEEE Confidence 11111111 11 1111 1 2236766666443 2222221 1 11344444332 11111 Q ss_pred -EEcC Q lcl|Aclame:pro 678 -AIGA 681 (681) Q Consensus 678 -~vg~ 681 (681) +.|+ T Consensus 750 ~s~~~ 754 (823) T protein:vir:95 750 ASRGI 754 (823) T ss_pred eeeeE Confidence 1111 Done!