Query lcl|Aclame:protein:vir:106552|NCBI_annot:putative protein|genbank:acc:NP_958587;genbank:gi:41179247;genbank:GeneID:2717088 Match_columns 117 No_of_seqs 29 out of 32 Neff 3.7 Searched_HMMs 1612 Date Sat Nov 30 21:10:11 2013 Command /home/guerois/workspace/virfam/python/lib/hhsearch//hhsearch2 -i .//seq/seq_6 -d /home/guerois/workspace/virfam/python/profile_database/capsid_neck_tail.hhm -glob -cpu 7 -o .//seq/HHR/seq_6_vs_rec_db.hhr No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM 1 protein:vir:106552 Length: 117 100.0 7.2E-67 4.5E-70 383.2 10.6 117 1-117 1-117 (117) 2 protein:vir:95261 Length: 133 95.4 0.00027 1.7E-07 40.1 8.1 111 1-117 1-127 (133) 3 protein:vir:4459 Length: 134 # 93.1 0.0017 1E-06 35.8 7.5 103 1-117 18-126 (134) 4 protein:vir:4955 Length: 116 # 93.1 0.0018 1.1E-06 35.6 7.6 102 1-114 1-116 (116) 5 protein:vir:4858 Length: 116 # 92.9 0.0019 1.2E-06 35.5 7.3 102 1-114 1-116 (116) 6 protein:vir:93599 Length: 116 90.9 0.012 7.6E-06 31.1 9.5 112 1-116 1-116 (116) 7 protein:vir:4832 Length: 116 # 87.7 0.0099 6.2E-06 31.6 6.6 104 1-114 1-116 (116) 8 protein:vir:105035 Length: 112 87.0 0.026 1.6E-05 29.3 8.5 107 1-117 1-112 (112) 9 protein:vir:4999 Length: 116 # 83.7 0.029 1.8E-05 29.1 7.1 102 1-114 1-116 (116) 10 protein:vir:100226 Length: 114 83.4 0.033 2E-05 28.7 7.3 101 4-114 1-114 (114) 11 protein:vir:81068 Length: 124 82.3 0.065 4.1E-05 27.1 8.5 113 1-117 1-123 (124) 12 protein:vir:100886 Length: 113 82.0 0.037 2.3E-05 28.4 7.0 100 5-114 1-113 (113) 13 protein:vir:7411 Length: 116 # 81.9 0.034 2.1E-05 28.6 6.8 101 4-114 1-116 (116) 14 protein:vir:105006 Length: 107 76.6 0.092 5.7E-05 26.3 7.4 105 1-117 1-107 (107) 15 protein:vir:107606 Length: 107 76.6 0.092 5.7E-05 26.3 7.4 105 1-117 1-107 (107) 16 protein:vir:102856 Length: 107 76.6 0.092 5.7E-05 26.3 7.4 105 1-117 1-107 (107) 17 protein:vir:102084 Length: 107 76.6 0.092 5.7E-05 26.3 7.4 105 1-117 1-107 (107) 18 protein:vir:102144 Length: 113 75.5 0.12 7.6E-05 25.6 7.8 105 1-111 1-113 (113) 19 protein:vir:100244 Length: 109 73.6 0.15 9.1E-05 25.2 7.7 105 1-117 2-109 (109) 20 protein:vir:3993 Length: 117 # 71.1 0.17 0.00011 24.8 7.4 102 4-115 1-117 (117) 21 protein:vir:81177 Length: 109 70.8 0.19 0.00012 24.5 7.7 105 1-117 1-108 (109) 22 protein:vir:5258 Length: 123 # 70.7 0.21 0.00013 24.3 7.9 105 1-117 8-114 (123) 23 protein:vir:1027 Length: 116 # 69.4 0.17 0.0001 24.8 7.0 101 4-114 1-116 (116) 24 protein:vir:1385 Length: 107 # 67.7 0.25 0.00015 23.9 8.5 102 1-111 1-107 (107) 25 protein:vir:1436 Length: 108 # 65.6 0.28 0.00017 23.6 7.6 105 1-117 1-108 (108) 26 protein:vir:80342 Length: 108 55.9 0.47 0.00029 22.4 7.6 105 1-117 1-108 (108) 27 protein:vir:3616 Length: 103 # 54.8 0.49 0.00031 22.3 7.7 102 1-112 1-103 (103) 28 protein:vir:2346 Length: 126 # 51.0 0.43 0.00027 22.6 5.8 99 1-110 1-126 (126) 29 protein:vir:10366 Length: 124 49.4 0.64 0.0004 21.6 7.4 113 1-117 1-123 (124) 30 protein:vir:1272 Length: 119 # 42.9 0.87 0.00054 20.9 9.3 110 1-117 1-118 (119) 31 protein:vir:4229 Length: 122 # 36.4 0.86 0.00054 20.9 5.1 101 1-110 1-122 (122) 32 protein:vir:1890 Length: 110 # 35.7 1.2 0.00075 20.1 7.6 105 1-116 1-110 (110) 33 protein:vir:99571 Length: 131 34.6 0.45 0.00028 22.5 3.2 95 1-103 11-131 (131) 34 protein:vir:5977 Length: 109 # 31.3 1.5 0.00093 19.6 7.6 104 1-117 1-109 (109) 35 protein:vir:742 Length: 102 # 31.2 1.5 0.00094 19.6 8.0 101 1-111 1-102 (102) 36 protein:vir:2434 Length: 122 # 30.7 1.6 0.00096 19.5 6.7 101 1-110 1-122 (122) 37 protein:vir:7775 Length: 122 # 28.4 1.7 0.0011 19.3 6.7 101 1-110 1-122 (122) 38 protein:vir:193 Length: 112 # 28.2 1.8 0.0011 19.2 8.6 109 1-116 1-112 (112) 39 protein:vir:3971 Length: 103 # 26.8 1.9 0.0012 19.0 8.3 102 1-112 1-103 (103) 40 protein:vir:4161 Length: 112 # 21.9 2 0.0012 18.9 4.4 102 1-112 1-112 (112) 41 protein:vir:97076 Length: 125 21.8 2.5 0.0016 18.4 8.0 113 1-117 2-124 (125) 42 protein:vir:100134 Length: 109 21.5 2.6 0.0016 18.3 8.6 103 1-114 2-109 (109) No 1 >protein:vir:106552 Length: 117 # NCBI annotation: putative protein # Family: family:all:6480 # MgeID: mge:1598 # MgeName: Lj965 # Cross-refs: genbank:acc:NP_958587;genbank:gi:41179247;genbank:GeneID:2717088 Probab=100.00 E-value=7.2e-67 Score=383.19 Aligned_cols=117 Identities=100% Similarity=1.518 Sum_probs=116.8 Q ss_pred CccccccCceeeeeccccccCCCcceeeecCCCeeEEEEEeccCCeeeeeeccccccceeeeeecccccccccccccEEE Q lcl|Aclame:pro 1 MRLKDSDLITVYLREPMNTQDDEGYSICGWGDPQPIRMNVQSAGGTVNAQLYGKDIKYIKTCKYQGDLLAEGHGEGFGVC 80 (117) Q Consensus 1 MRLr~~~Lk~~~lrk~~~~~D~EG~~~~gY~d~ve~~anv~pAgG~vqAeiYG~rL~yikn~~~~gd~l~~~~~e~dGiC 80 (117) ||||++||+|||||+++.++|+||+++++|++|++|+||||||||+|||||||+||+|||||+||||+|+++++|+|||| T Consensus 1 MRLk~~~Lkt~ylR~~~~~~D~EGn~~~~y~~p~~~~mni~~AgG~vqAeiYG~rl~yIknc~yqgd~l~~~~~E~dGvC 80 (117) T protein:vir:10 1 MRLKDSDLITVYLREPMNTQDDEGYSICGWGDPQPIRMNVQSAGGTVNAQLYGKDIKYIKTCKYQGDLLAEGHGEGFGVC 80 (117) T ss_pred CccccccCceeeeccccccccccccceeccCCcceEEEEEecCCCeeeeeeechhhhhhhhccccchhhcCCCCcCceEE Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred EcCCCCCCCCeEEEEEEecccceeEEEEeecccCcCC Q lcl|Aclame:pro 81 LKVSSSSDPDYKITAIQEFSTHKNVTLERIKRDEQND 117 (117) Q Consensus 81 l~v~~~~ePDYkIvaI~~ys~h~~i~LErir~~~~~~ 117 (117) |+|++++||||+|+||||||+|+||||||+|+||||| T Consensus 81 l~V~~~~ePdYkI~sIq~ys~h~~itLEr~~~~~~~~ 117 (117) T protein:vir:10 81 LKVSSSSDPDYKITAIQEFSTHKNVTLERIKRDEQND 117 (117) T ss_pred EecCCCCCcceEEEEeeecCcceeEEEEeecCCCCCC Confidence 9999999999999999999999999999999999999 No 2 >protein:vir:95261 Length: 133 # NCBI annotation: Phage hypothetical protein # Family: family:all:31736 # MgeID: mge:1561 # MgeName: Felix 01 # Cross-refs: genbank:acc:NP_944894;genbank:gi:38707834;genbank:GeneID:2744047 Probab=95.41 E-value=0.00027 Score=40.13 Aligned_cols=111 Identities=17% Similarity=0.129 Sum_probs=71.1 Q ss_pred CccccccCceeeeeccccc--cCCCcceeeecCC-CeeEEEEEeccCCe------eeeeeccccccceeeeeeccccccc Q lcl|Aclame:pro 1 MRLKDSDLITVYLREPMNT--QDDEGYSICGWGD-PQPIRMNVQSAGGT------VNAQLYGKDIKYIKTCKYQGDLLAE 71 (117) Q Consensus 1 MRLr~~~Lk~~~lrk~~~~--~D~EG~~~~gY~d-~ve~~anv~pAgG~------vqAeiYG~rL~yikn~~~~gd~l~~ 71 (117) |||+++- .-.-+|++..+ ..+.|....|=+. ++.|+|+||||.=+ -.|-+=|.|+.-..-+..+..+-.. T Consensus 1 M~~~~rh-s~~~~R~~seg~Y~~~~GrWV~g~~~v~~~i~asIQP~~~ss~~~~q~~~lpeGrrit~avrIYTda~L~va 79 (133) T protein:vir:95 1 MRLLNRH-SFVVKRKVSEDGYYNDDGDWVASQDIVEVNCKGNIQPYIKGSVKNGTQIALPEGIRLTDTRILYTTYKLRTS 79 (133) T ss_pred CCccccc-eeEEEEeecCCceEccCCcccCCCCccceeeeeeecccccccccccchhcccCCeeeeeEEEEEeeeeeeee Confidence 9998763 22345665554 4556776666665 48999999996544 2244668898877665555443332 Q ss_pred cc---ccccEEEEcCCCCCCCCeEEEEEEecccce----eEEEEeecccCcCC Q lcl|Aclame:pro 72 GH---GEGFGVCLKVSSSSDPDYKITAIQEFSTHK----NVTLERIKRDEQND 117 (117) Q Consensus 72 ~~---~e~dGiCl~v~~~~ePDYkIvaI~~ys~h~----~i~LErir~~~~~~ 117 (117) +. +++| |+-.+.. +|+|++..||+.-+ -..--.||+++-|- T Consensus 80 ge~~~~~gD--vvl~dg~---eYev~~r~~w~~Gv~~isHyrY~aVR~~~~~~ 127 (133) T protein:vir:95 80 DDVEWNESD--IVMIDGH---EYEVFMTMDWSQQLSHTSHYEYIIIRRDKMNA 127 (133) T ss_pred cccccCCCc--EEEEcCC---ceEEEEecchhhccccCCceeEEEEeecchhh Confidence 32 4455 4444433 69999999998644 24455678887777 No 3 >protein:vir:4459 Length: 134 # NCBI annotation: hypothetical protein # Family: family:all:116 # ACLAME annotation(s): phi:0000012 - phage head tail joining # MgeID: mge:96 # MgeName: ST64B # Cross-refs: genbank:acc:NP_700382;genbank:gi:23505454;genbank:GeneID:955661 Probab=93.15 E-value=0.0017 Score=35.80 Aligned_cols=103 Identities=9% Similarity=0.125 Sum_probs=66.9 Q ss_pred CccccccCceeeeeccccccCCCcceeeecCCCeeEEEEEeccCCe--eeeeeccccccceeeeeecccccccccccccE Q lcl|Aclame:pro 1 MRLKDSDLITVYLREPMNTQDDEGYSICGWGDPQPIRMNVQSAGGT--VNAQLYGKDIKYIKTCKYQGDLLAEGHGEGFG 78 (117) Q Consensus 1 MRLr~~~Lk~~~lrk~~~~~D~EG~~~~gY~d~ve~~anv~pAgG~--vqAeiYG~rL~yikn~~~~gd~l~~~~~e~dG 78 (117) =+|++ .+-+.++...+|+.|....+|.+-..+.|.|.|.+|+ .+|+-=.....+.-.|+|..+.. .++ T Consensus 18 G~L~~----RI~i~~~~~~~D~~G~~~~~w~~~~~vwA~v~~~sg~E~~~a~~~~~~~t~~i~IR~~~~It------~~~ 87 (134) T protein:vir:44 18 GELDQ----RIVIRRRVDVPADDFGVTPTYPEQIRTWAKKAQPGAAAYQGSVQIENRVTHYFTIRFRRGIT------ADH 87 (134) T ss_pred cccCc----cEEEEeeeeeeCCCCCeecceEeeEEEEEEEEecCchheeeccceeeeeeEEEEEEeCCCCC------ccc Confidence 03332 2456677888999999999999888999999999987 44444455567777788875432 223 Q ss_pred EEEcCCCCCCCCeEEEEEEec-ccceeEEEEeecccCcC---C Q lcl|Aclame:pro 79 VCLKVSSSSDPDYKITAIQEF-STHKNVTLERIKRDEQN---D 117 (117) Q Consensus 79 iCl~v~~~~ePDYkIvaI~~y-s~h~~i~LErir~~~~~---~ 117 (117) --++ . . =.|.|.+|.+- ..|..++|.-..-|..+ | T Consensus 88 RI~~-~-g--~~y~I~~I~~~~~~~~~L~i~c~evg~~~g~~~ 126 (134) T protein:vir:44 88 EVLH-D-D--ISYRVKRVRDLNGKRRFLLIECEALGTDNGSDY 126 (134) T ss_pred EEEE-C-C--eEEEEEEecCCCcCCcEEEEEEEEeeecCCCCc Confidence 3343 2 2 24999999764 55666665554433333 3 No 4 >protein:vir:4955 Length: 116 # NCBI annotation: putative head-tail joining protein # Family: family:all:1030 # MgeID: mge:108 # MgeName: Sfi19 # Cross-refs: genbank:acc:NP_049931;genbank:gi:9632902;genbank:GeneID:1262078 Probab=93.07 E-value=0.0018 Score=35.57 Aligned_cols=102 Identities=12% Similarity=0.096 Sum_probs=75.7 Q ss_pred CccccccCceeeeecccc------ccCCC-cceeeecCCCeeEEEEEeccCCeeeeeeccccccceee--eeeccccccc Q lcl|Aclame:pro 1 MRLKDSDLITVYLREPMN------TQDDE-GYSICGWGDPQPIRMNVQSAGGTVNAQLYGKDIKYIKT--CKYQGDLLAE 71 (117) Q Consensus 1 MRLr~~~Lk~~~lrk~~~------~~D~E-G~~~~gY~d~ve~~anv~pAgG~vqAeiYG~rL~yikn--~~~~gd~l~~ 71 (117) |++ +.++|.-|++++. .+|+. |....+|-.-..+.|.+++-.++-+=+..|..|.-... ++++... T Consensus 1 m~~--~k~~~~~ln~rI~Fg~~~~~~n~~tG~~~~~f~~~f~~wa~~~~~~~~q~~~~~gt~~e~T~~~vIRh~~~i--- 75 (116) T protein:vir:49 1 MAR--GRYLPSDFRYKADFGTYQSTPNKFTGVSVPKFVKQFTLHYKPHTRTLNQEYLAIQNGENDTRVIVIRHNAKV--- 75 (116) T ss_pred Ccc--cccccccCceeEEeeeeeeeecCCCCcccceeeeeEEEEEEeecccceeeeeeecccccccEEEEEEeCCCC--- Confidence 877 5578888877654 46664 88888887777899999999999999999999986665 5554321 Q ss_pred ccccccEEEEcCCCCCCCCeEEEEEEeccc-----ceeEEEEeecccC Q lcl|Aclame:pro 72 GHGEGFGVCLKVSSSSDPDYKITAIQEFST-----HKNVTLERIKRDE 114 (117) Q Consensus 72 ~~~e~dGiCl~v~~~~ePDYkIvaI~~ys~-----h~~i~LErir~~~ 114 (117) . +..|+-.+... |.|++|-|-+. +-.|+|.+.++++ T Consensus 76 ---~-~~~~v~~~g~~---Y~I~~IspD~~~~~~~yD~iTlk~~~k~g 116 (116) T protein:vir:49 76 ---L-EGQVVTLNGTQ---YDIVRISPDDNFGFNHYDFLTLKKRKKVG 116 (116) T ss_pred ---C-cccEEEECCeE---EEEEEeCCCCccCcceeeEEEEEEEeeCC Confidence 2 22345445444 99999999544 3679999999988 No 5 >protein:vir:4858 Length: 116 # NCBI annotation: putative head-tail joining protein # Family: family:all:1030 # MgeID: mge:106 # MgeName: DT1 # Cross-refs: genbank:acc:NP_049398;genbank:gi:9632426;genbank:GeneID:1258519 Probab=92.85 E-value=0.0019 Score=35.55 Aligned_cols=102 Identities=12% Similarity=0.059 Sum_probs=75.8 Q ss_pred CccccccCceeeeeccc------cccCCC-cceeeecCCCeeEEEEEeccCCeeeeeeccccccceee--eeeccccccc Q lcl|Aclame:pro 1 MRLKDSDLITVYLREPM------NTQDDE-GYSICGWGDPQPIRMNVQSAGGTVNAQLYGKDIKYIKT--CKYQGDLLAE 71 (117) Q Consensus 1 MRLr~~~Lk~~~lrk~~------~~~D~E-G~~~~gY~d~ve~~anv~pAgG~vqAeiYG~rL~yikn--~~~~gd~l~~ 71 (117) |++-+ ++|.-|++++ ..+|+. |....+|-.-..+.|.+++-.++-+=+..|-.|.-... ++++... T Consensus 1 M~~~k--~~~~~ln~ri~Fg~~~~~~n~~~G~~~~~f~~~~~~w~~~~~~t~~q~~~~~gt~~e~T~~~vIRh~~~i--- 75 (116) T protein:vir:48 1 MARVG--YLPSDFRYKADFGTYQSTPNKFTGVSVPKFVKQFTLHYKPHTRTLNQEYLAQQNGESDTIVIVIRHNAKV--- 75 (116) T ss_pred Ccccc--cccccccEeEEeeeeeeeecCCCCcccceeeeeEEEEEEeeecchheeeeeecccccccEEEEEEeCCCC--- Confidence 66554 6777776654 446674 88888888877999999999999999999999987765 5554321 Q ss_pred ccccccEEEEcCCCCCCCCeEEEEEEeccc-----ceeEEEEeecccC Q lcl|Aclame:pro 72 GHGEGFGVCLKVSSSSDPDYKITAIQEFST-----HKNVTLERIKRDE 114 (117) Q Consensus 72 ~~~e~dGiCl~v~~~~ePDYkIvaI~~ys~-----h~~i~LErir~~~ 114 (117) .+..|+-.+... |+|++|-|-+. +-.|+|.+.++++ T Consensus 76 ----~~~~~v~~~G~~---Y~I~~Is~D~~~~~~~yD~iTlk~~~k~g 116 (116) T protein:vir:48 76 ----LEGQVVTLNGTQ---YDIVRISADENFGFNHYDFLTLRKHKKVG 116 (116) T ss_pred ----CcccEEEECCeE---EEEEEeCCCCCcCcceeeEEEEEEEeeCC Confidence 233455556444 99999999544 3679999999988 No 6 >protein:vir:93599 Length: 116 # NCBI annotation: putative head-tail adaptor # Family: family:all:116 # ACLAME annotation(s): phi:0000012 - phage head tail joining # MgeID: mge:157 # MgeName: phi 4795 # Cross-refs: genbank:acc:YP_001449298;genbank:gi:157166046;interpro:IPR006453;interpro:IPR013045;uniprot:Q6H9U3;genbank:GeneID:5580421 Probab=90.86 E-value=0.012 Score=31.07 Aligned_cols=112 Identities=9% Similarity=0.060 Sum_probs=76.0 Q ss_pred CccccccCce-eeeeccccccCCCcceeeecCCCeeEEEEEeccCCe--eeeeeccccccceeeeeeccccccccccccc Q lcl|Aclame:pro 1 MRLKDSDLIT-VYLREPMNTQDDEGYSICGWGDPQPIRMNVQSAGGT--VNAQLYGKDIKYIKTCKYQGDLLAEGHGEGF 77 (117) Q Consensus 1 MRLr~~~Lk~-~~lrk~~~~~D~EG~~~~gY~d~ve~~anv~pAgG~--vqAeiYG~rL~yikn~~~~gd~l~~~~~e~d 77 (117) |.++--+|.. +-+-++...+|+.|....+|.+-..+.|+|.+-+|+ ++|.-=.....+--.|+|.-.. .+...+ T Consensus 1 m~m~aG~L~~rI~iq~~~~~~d~~G~~~~~w~~~~~~wA~v~~~sg~e~~~a~~~~~~~~~~i~iRy~~~~---dI~~~~ 77 (116) T protein:vir:93 1 MAISAGRLTQMISVLNPVLTRNAAGEMTEEWVSCGKIHADIRGRSSRERMQSGAEMAQAEIRIWVRGQSGR---EITAAS 77 (116) T ss_pred CCcCccccCccEEEEeeeeccCCCCCeecceEeEEEEEEEEEecChhheeeccceeeeeeEEEEEEecCCC---CCCccc Confidence 8887777754 455677899999999999999988999999999998 7776666677777788887321 122222 Q ss_pred EEEEcCCCCCCCCeEEEEE-EecccceeEEEEeecccCcC Q lcl|Aclame:pro 78 GVCLKVSSSSDPDYKITAI-QEFSTHKNVTLERIKRDEQN 116 (117) Q Consensus 78 GiCl~v~~~~ePDYkIvaI-~~ys~h~~i~LErir~~~~~ 116 (117) =|=.....-..=-|.|+|| -+...|..++|-- +.|..+ T Consensus 78 Ri~~~~~~~~g~~y~I~~v~~~~~~~~~l~i~c-~eg~~~ 116 (116) T protein:vir:93 78 RLHVLSGPWRDRILNVVGLPVPDATGGRLEILC-RLGGEK 116 (116) T ss_pred EEEEcCcccCCeEEEEEecCCCCCCCcEEEEEE-EecCCC Confidence 2211101111235999999 4678888888754 344444 No 7 >protein:vir:4832 Length: 116 # NCBI annotation: ORF28 # Family: family:all:1030 # MgeID: mge:105 # MgeName: 7201 # Cross-refs: genbank:acc:NP_038329;genbank:gi:9634655;genbank:GeneID:1262597 Probab=87.73 E-value=0.0099 Score=31.56 Aligned_cols=104 Identities=11% Similarity=0.055 Sum_probs=74.9 Q ss_pred CccccccCceeeeecccc------ccCC-CcceeeecCCCeeEEEEEeccCCeeeeeeccccccceeeeeeccccccccc Q lcl|Aclame:pro 1 MRLKDSDLITVYLREPMN------TQDD-EGYSICGWGDPQPIRMNVQSAGGTVNAQLYGKDIKYIKTCKYQGDLLAEGH 73 (117) Q Consensus 1 MRLr~~~Lk~~~lrk~~~------~~D~-EG~~~~gY~d~ve~~anv~pAgG~vqAeiYG~rL~yikn~~~~gd~l~~~~ 73 (117) |++- +++|.-|++++. .+|+ .|....+|-.-..+.|.+|.-..+-+=+..|-.|.-....-+-=+. T Consensus 1 M~~~--k~~p~~~n~ri~FG~~~~~~n~~tG~~~~~f~~~ft~~~~~~t~t~~q~~~~~Gt~~edt~~~vIRh~~----- 73 (116) T protein:vir:48 1 MARV--RYLPSDFRFKADFGTYQSSPNKFTGVSVPKFVKQFTLHYKPHTRTLNQEYLAIQNGENDTRVIVIRHNS----- 73 (116) T ss_pred Ceee--eeehhhccEEEEeceeeeeeCCCCCcccceeeeeEEEEEEEeecchhheeeeccccccCcEEEEEEeCC----- Confidence 5543 377777766544 4556 5888888887778999999999999999999999877764333111 Q ss_pred ccccEEEEcCCCCCCCCeEEEEEEecc-----cceeEEEEeecccC Q lcl|Aclame:pro 74 GEGFGVCLKVSSSSDPDYKITAIQEFS-----THKNVTLERIKRDE 114 (117) Q Consensus 74 ~e~dGiCl~v~~~~ePDYkIvaI~~ys-----~h~~i~LErir~~~ 114 (117) .-.+..|+-.+... |+|++|-|-. ++-.|+|.+.+++. T Consensus 74 ~i~~~~~v~~~g~~---Y~I~~Is~Dd~~~~~~yD~lTlk~~~k~g 116 (116) T protein:vir:48 74 KVLEGQVVTLNGTQ---YDIVRISPDENFGFNHYDFLTLKKRKKVG 116 (116) T ss_pred CCCcccEEEECCeE---EEEEEeCCCCCcCcceeeEEEEEEEeeCC Confidence 12344466556544 9999999944 45789999999988 No 8 >protein:vir:105035 Length: 112 # NCBI annotation: Gp9 # Family: family:all:11389 # MgeID: mge:1465 # MgeName: phiKO2 # Cross-refs: genbank:acc:YP_006589;genbank:gi:46402095;genbank:GeneID:2777900 Probab=87.02 E-value=0.026 Score=29.26 Aligned_cols=107 Identities=12% Similarity=-0.013 Sum_probs=67.0 Q ss_pred CccccccCce-eeeeccccccCCCccee-eecCCCeeEEEEEeccCCe--eeeeeccccccceeeeeecccccccccccc Q lcl|Aclame:pro 1 MRLKDSDLIT-VYLREPMNTQDDEGYSI-CGWGDPQPIRMNVQSAGGT--VNAQLYGKDIKYIKTCKYQGDLLAEGHGEG 76 (117) Q Consensus 1 MRLr~~~Lk~-~~lrk~~~~~D~EG~~~-~gY~d~ve~~anv~pAgG~--vqAeiYG~rL~yikn~~~~gd~l~~~~~e~ 76 (117) |.++--+|.. +-|.++...+|+.|+.. ..|.+-..+-|+|.+.+|+ .+|+-=.....+--.++|..+.- .. T Consensus 1 m~M~aG~L~~RItiq~~~~~~D~~G~~~~~~W~~~~tvWA~v~~~sg~E~~~A~~~~~~~t~~f~IRyr~dI~-----~~ 75 (112) T protein:vir:10 1 MSLKPGDMNCRITIGYLQSGRGPLGEPLPEKLVESGKAWAKRELVSGRKVRTMDQQQVMETCLFTVYPGVVVD-----ID 75 (112) T ss_pred CCCCccccCCcEEEEeeeeccCCCCCEeccceeeeEEEEEEEEccCchheeecccccceeeEEEEEeeCCCCC-----cc Confidence 8888777754 45677888999999986 5699988999999999997 23332233444555566654321 11 Q ss_pred cEEEEcCCCCCCCCeEEEEEEecccceeEEEEe-ecccCcCC Q lcl|Aclame:pro 77 FGVCLKVSSSSDPDYKITAIQEFSTHKNVTLER-IKRDEQND 117 (117) Q Consensus 77 dGiCl~v~~~~ePDYkIvaI~~ys~h~~i~LEr-ir~~~~~~ 117 (117) .=-++ .. =-|.|.||.+...-.-|..|+ ||-++..| T Consensus 76 -mRI~~-~g---r~y~I~~Vd~~~~r~llc~E~~~~~~~~~~ 112 (112) T protein:vir:10 76 -WKITT-KD---LVYTVRNIDRKTDQIIITGEADGRHDRTGD 112 (112) T ss_pred -cEEEE-CC---eEEEEecccCCCCcEEEEeecccccccCCC Confidence 11122 21 238888886655444444443 66677777 No 9 >protein:vir:4999 Length: 116 # NCBI annotation: putative head-tail joining protein # Family: family:all:1030 # MgeID: mge:109 # MgeName: Sfi21 # Cross-refs: genbank:acc:NP_049973;genbank:gi:9632945;genbank:GeneID:1262108 Probab=83.74 E-value=0.029 Score=29.05 Aligned_cols=102 Identities=9% Similarity=0.016 Sum_probs=74.4 Q ss_pred CccccccCceeeeeccc------cccCC-CcceeeecCCCeeEEEEEeccCCeeeeeeccccccceeee--eeccccccc Q lcl|Aclame:pro 1 MRLKDSDLITVYLREPM------NTQDD-EGYSICGWGDPQPIRMNVQSAGGTVNAQLYGKDIKYIKTC--KYQGDLLAE 71 (117) Q Consensus 1 MRLr~~~Lk~~~lrk~~------~~~D~-EG~~~~gY~d~ve~~anv~pAgG~vqAeiYG~rL~yikn~--~~~gd~l~~ 71 (117) |++- .++|.-|++++ ..+|+ .|....+|-.-..+.|.+|.-..+-+=+..|-.|.-.... +++.. T Consensus 1 M~~~--k~~p~~ln~ri~Fg~~~~~~n~~tG~~~~~f~~~ft~~~~~~t~t~~q~~~~~Gt~~edT~~~vIRh~~~---- 74 (116) T protein:vir:49 1 MRKV--KYLPSDFPYKADFGTYQSTPNKFTGVSVPKFVKQFTLHYQPHIRTLNQEYLAQQNGEDDTRVIVIRHNSK---- 74 (116) T ss_pred Cccc--ccccccCcEeEEeeeeeeeecCCCCcccceeeeeEEEEEEEeecchheeeeeccccccccEEEEEEeCCC---- Confidence 6654 35666666544 45556 5888888888778999999999999999999999877764 44321 Q ss_pred ccccccEEEEcCCCCCCCCeEEEEEEec-----ccceeEEEEeecccC Q lcl|Aclame:pro 72 GHGEGFGVCLKVSSSSDPDYKITAIQEF-----STHKNVTLERIKRDE 114 (117) Q Consensus 72 ~~~e~dGiCl~v~~~~ePDYkIvaI~~y-----s~h~~i~LErir~~~ 114 (117) -.+..|+-.+... |.|++|-|- ..+-.|+|.+.++++ T Consensus 75 ---i~~~~~v~~~g~~---Y~I~~is~Dd~~~~~~yD~lTlk~~~~~g 116 (116) T protein:vir:49 75 ---VIEGQVVVLHGTQ---YDIIRASSNENFGINRYDFLPVRQRKNVG 116 (116) T ss_pred ---CCcccEEEECCeE---EEEEEeCCCCCCCcceeeEEEEEEeecCC Confidence 2334456556444 999999984 345789999999987 No 10 >protein:vir:100226 Length: 114 # NCBI annotation: putative head-tail joining protein # Family: family:all:1030 # MgeID: mge:1524 # MgeName: phi AT3 # Cross-refs: genbank:acc:YP_025033;genbank:gi:48697266;genbank:GeneID:2948324 Probab=83.42 E-value=0.033 Score=28.72 Aligned_cols=101 Identities=12% Similarity=0.120 Sum_probs=72.1 Q ss_pred ccccCceeeeeccc------cccCCCcceeeecCCCeeEEEEEeccCCeeeeeeccccccceee--eeeccccccccccc Q lcl|Aclame:pro 4 KDSDLITVYLREPM------NTQDDEGYSICGWGDPQPIRMNVQSAGGTVNAQLYGKDIKYIKT--CKYQGDLLAEGHGE 75 (117) Q Consensus 4 r~~~Lk~~~lrk~~------~~~D~EG~~~~gY~d~ve~~anv~pAgG~vqAeiYG~rL~yikn--~~~~gd~l~~~~~e 75 (117) +-+.++|.-|++++ ...|+.|....+|-.-..+.|.+|.-..+-+=+..|-.|.-... ++++.. - T Consensus 1 m~~~~~p~~ln~ri~FG~~~t~~~~~G~~~~~fv~~f~~~~~~~t~t~~q~~~~~Gt~~e~t~~~vIRh~~~-------i 73 (114) T protein:vir:10 1 MMAKFKVADFSRKVDLGSPQSHKTGAGINITSFVPNYSLHFKQQTRTLTQQYTLVGTRLDNSITIIVRHDTR-------N 73 (114) T ss_pred CCccccccccceEEEeeeeeeecCCCCcccceeeeeEEEEEEEeecchheeeeeccccccccEEEEEEeCCC-------C Confidence 45566666665544 45677888888877767889999999999999999999988665 444321 1 Q ss_pred ccEEEEcCCCCCCCCeEEEEEEe-----cccceeEEEEeecccC Q lcl|Aclame:pro 76 GFGVCLKVSSSSDPDYKITAIQE-----FSTHKNVTLERIKRDE 114 (117) Q Consensus 76 ~dGiCl~v~~~~ePDYkIvaI~~-----ys~h~~i~LErir~~~ 114 (117) .+..++-.+... |+|++|-| +.++=.|+|.|..+|. T Consensus 74 t~~m~v~~~g~~---Y~Iv~IspDd~~~~~~yD~iTlkk~~~ga 114 (114) T protein:vir:10 74 ASQKQARLDGIV---YDISDISPDDSNDAIRYDYLTLVKTTKGA 114 (114) T ss_pred CcccEEEECCeE---EEEEEeCCCCccCcceeeeEEEEEEecCC Confidence 222334335444 99999988 4556778999999998 No 11 >protein:vir:81068 Length: 124 # NCBI annotation: p11 # Family: family:all:7034 # MgeID: mge:1889 # MgeName: Xop411 # Cross-refs: genbank:acc:YP_001285681;genbank:gi:148727189;genbank:GeneID:5247113 Probab=82.29 E-value=0.065 Score=27.08 Aligned_cols=113 Identities=13% Similarity=0.097 Sum_probs=63.0 Q ss_pred CccccccCce-eeeeccccccCCCcceeeecCCCeeEEEEEeccCCeee-eeec-----cccccceeeeeeccccccccc Q lcl|Aclame:pro 1 MRLKDSDLIT-VYLREPMNTQDDEGYSICGWGDPQPIRMNVQSAGGTVN-AQLY-----GKDIKYIKTCKYQGDLLAEGH 73 (117) Q Consensus 1 MRLr~~~Lk~-~~lrk~~~~~D~EG~~~~gY~d~ve~~anv~pAgG~vq-AeiY-----G~rL~yikn~~~~gd~l~~~~ 73 (117) |.++--+|+. +-|-++...+|+.|....+|.+-..+-|+|.+.+|+-- .+.+ -....+--.++|.-. ...++ T Consensus 1 m~M~aG~L~~RItiq~~~~~~D~~G~~~~~W~~~~tvWA~V~~lsG~e~~re~~~a~~~~s~~~~~i~iR~r~~-~~~~I 79 (124) T protein:vir:81 1 MPISAGKLNTRAVLQRRQEGADEWGAPKHVWLEVGAFYTNPKNDTGMGAIRSSVGSGVPANIVNYSLEVRSETI-RRLDP 79 (124) T ss_pred CCCCcccccceEEEEecccccCCCCCeecceEeEEEEEEeeeccccchhhhhhhhhcceeeeeEEEEEEEEeec-cCCCC Confidence 8777777754 45566788999999999999998899999999988311 1111 112233334554310 00011 Q ss_pred ccccEEEEcCCC--CCCCCeEEEEEEe-cccceeEEEEeecccCcCC Q lcl|Aclame:pro 74 GEGFGVCLKVSS--SSDPDYKITAIQE-FSTHKNVTLERIKRDEQND 117 (117) Q Consensus 74 ~e~dGiCl~v~~--~~ePDYkIvaI~~-ys~h~~i~LErir~~~~~~ 117 (117) ....=| ++-.+ ..+=-|.|+||-| +..|.-++|=- +..-|| T Consensus 80 t~~mRi-~~~~~~~~~g~iy~I~~Vi~d~~~~~~l~L~C--~~g~~~ 123 (124) T protein:vir:81 80 QPDDRL-LIRVPFTARDMIMSVTGVIIDFADASHAYILA--QAGTNE 123 (124) T ss_pred CCcceE-EECCCcccCCeeEEEEEecCCCCCCeEEEEEE--EecCCC Confidence 111111 11110 0122388999876 55676666643 444455 No 12 >protein:vir:100886 Length: 113 # NCBI annotation: putative head-tail joining protein # Family: family:all:1030 # MgeID: mge:1473 # MgeName: Lc-Nu # Cross-refs: genbank:acc:YP_358766;genbank:gi:77999992;genbank:GeneID:3726157 Probab=82.00 E-value=0.037 Score=28.42 Aligned_cols=100 Identities=12% Similarity=0.099 Sum_probs=71.3 Q ss_pred cccCceeeeecc------ccccCCCcceeeecCCCeeEEEEEeccCCeeeeeeccccccceee--eeecccccccccccc Q lcl|Aclame:pro 5 DSDLITVYLREP------MNTQDDEGYSICGWGDPQPIRMNVQSAGGTVNAQLYGKDIKYIKT--CKYQGDLLAEGHGEG 76 (117) Q Consensus 5 ~~~Lk~~~lrk~------~~~~D~EG~~~~gY~d~ve~~anv~pAgG~vqAeiYG~rL~yikn--~~~~gd~l~~~~~e~ 76 (117) =.+++|.-|+++ ....|+.|....+|-.-..+.|.+|.-..+-+=+..|-.|.-... ++++... . T Consensus 1 m~k~~p~~ln~ri~FG~~~t~~~~~G~~~~~f~~~f~~~~~~~t~t~~q~~~~~Gt~~e~t~~~vIRh~~~i-------t 73 (113) T protein:vir:10 1 MAKFKVADFSRKVDLGSPKSHTTGAGLNITSFVPNYSLHFKQQTRTLTQQYTLVGTRLDNSITVIVRHDPRN-------A 73 (113) T ss_pred CCcccccccceEEEeeeeecccCCCCcccceeEeeEEEEEEEeecchheeeeeccccccccEEEEEEeCCCC-------C Confidence 122555555443 445788899888888777899999999999999999999988665 4443211 2 Q ss_pred cEEEEcCCCCCCCCeEEEEEEe-----cccceeEEEEeecccC Q lcl|Aclame:pro 77 FGVCLKVSSSSDPDYKITAIQE-----FSTHKNVTLERIKRDE 114 (117) Q Consensus 77 dGiCl~v~~~~ePDYkIvaI~~-----ys~h~~i~LErir~~~ 114 (117) +..++-.+... |+|++|-| +.++=.|+|.|..+|. T Consensus 74 ~~m~v~~~g~~---Y~I~~Is~Dd~~~~~~yD~iTlkk~~~ga 113 (113) T protein:vir:10 74 SQKQARLDGIV---YDISDISPDDSNDAIRYDYLTLVKTTKGA 113 (113) T ss_pred cccEEEECCeE---EEEEEeCCCCCCCcceeeeEEEEEEecCC Confidence 22233335444 99999998 5666789999999998 No 13 >protein:vir:7411 Length: 116 # NCBI annotation: hypothetical protein # Family: family:all:1030 # MgeID: mge:146 # MgeName: P335 # Cross-refs: genbank:acc:NP_839928;genbank:gi:30089898;genbank:GeneID:1260685 Probab=81.86 E-value=0.034 Score=28.61 Aligned_cols=101 Identities=11% Similarity=0.034 Sum_probs=66.4 Q ss_pred ccccCceeeeeccccc------cCCCcceeeecCC-C-eeEEEEEeccCCeeeeeeccccccceee--eeeccccccccc Q lcl|Aclame:pro 4 KDSDLITVYLREPMNT------QDDEGYSICGWGD-P-QPIRMNVQSAGGTVNAQLYGKDIKYIKT--CKYQGDLLAEGH 73 (117) Q Consensus 4 r~~~Lk~~~lrk~~~~------~D~EG~~~~gY~d-~-ve~~anv~pAgG~vqAeiYG~rL~yikn--~~~~gd~l~~~~ 73 (117) +-+.++|.-|++++.. +|+.|.....+.- + ..+.|.+|.-..+=+=+..|-.|..... ++++... T Consensus 1 M~~~~~p~~ln~ri~Fg~~~~~~n~~g~~~~~~~~~~~f~~w~a~~t~t~~q~~~~~Gt~~edT~~~vIRh~~~i----- 75 (116) T protein:vir:74 1 MAKTYKPNDFNRKCKIGVTKTVTTPTGGKIEKIDPATVLNVRFAAKMRSLALQFQIIGTTTADTFDIAIRHNKLV----- 75 (116) T ss_pred CcccccccccceeEEeeeeeeeeCCCCCcccceEEeeeEEEEEEEeecchheeeeeccccccCcEEEEEEeCCCC----- Confidence 4446888888776554 5666655443321 1 3567888888888888999999887665 4454321 Q ss_pred ccccEEEEcCCCCCCCCeEEEEEEe-----cccceeEEEEeecccC Q lcl|Aclame:pro 74 GEGFGVCLKVSSSSDPDYKITAIQE-----FSTHKNVTLERIKRDE 114 (117) Q Consensus 74 ~e~dGiCl~v~~~~ePDYkIvaI~~-----ys~h~~i~LErir~~~ 114 (117) ..+-.+.+ +... |+|++|-| +.++=.|+|.+..+|- T Consensus 76 -~~~m~v~~-~g~~---Y~Iv~Is~Dd~~~~~~yD~iTlk~~~~ga 116 (116) T protein:vir:74 76 -TKKMFVQI-DDVL---YNIINISSDESAKLIKFDILTLQAKKKGA 116 (116) T ss_pred -CcCcEEEE-CCeE---EEEEEeCCCCccCcceeeeEEEEEEeecC Confidence 12223343 4333 99999988 3444559999999988 No 14 >protein:vir:105006 Length: 107 # NCBI annotation: putative head-tail adaptor protein # Family: family:all:116 # ACLAME annotation(s): phi:0000012 - phage head tail joining # MgeID: mge:1490 # MgeName: W Beta # Cross-refs: genbank:acc:YP_459971;genbank:gi:85701386;genbank:GeneID:3882147 Probab=76.63 E-value=0.092 Score=26.27 Aligned_cols=105 Identities=16% Similarity=0.171 Sum_probs=60.5 Q ss_pred CccccccCceeeeeccccccCCCcceeeecCCCeeEEEEEeccCCee--eeeeccccccceeeeeecccccccccccccE Q lcl|Aclame:pro 1 MRLKDSDLITVYLREPMNTQDDEGYSICGWGDPQPIRMNVQSAGGTV--NAQLYGKDIKYIKTCKYQGDLLAEGHGEGFG 78 (117) Q Consensus 1 MRLr~~~Lk~~~lrk~~~~~D~EG~~~~gY~d~ve~~anv~pAgG~v--qAeiYG~rL~yikn~~~~gd~l~~~~~e~dG 78 (117) |+-=+-+-+...+++....+|..|....+|.+-..+-|+|.|.+|+- +|.-=+....+.-.|+|.-+. ...+= T Consensus 1 M~~G~L~~rI~i~~~~~~~~d~~G~~~~~w~~~~~~wA~v~~~sg~e~~~a~~~~~~~t~~i~iR~~~~I-----~~~~r 75 (107) T protein:vir:10 1 MNPAKLDKRLTFQVKDENAKGPDGDPIDGYKDAFTVWGSFVYLKGRKYFEAAAANSEVQGETEIRNRDDV-----SADMK 75 (107) T ss_pred CCccccCccEEEEeceeeccCCCCccccceEeeEEEEEEEEecCchhheeccceeeeeeEEEEEEecCCC-----CcccE Confidence 44333333333333333445666778889988789999999999973 233334455555567776432 22222 Q ss_pred EEEcCCCCCCCCeEEEEEEecccceeEEEEeecccCcCC Q lcl|Aclame:pro 79 VCLKVSSSSDPDYKITAIQEFSTHKNVTLERIKRDEQND 117 (117) Q Consensus 79 iCl~v~~~~ePDYkIvaI~~ys~h~~i~LErir~~~~~~ 117 (117) | ++ . .=.|.|.+|.+...+.-+ .-+..++.|- T Consensus 76 i-~~-~---g~~y~I~~v~~~~~~~~~--l~~~~~~~~G 107 (107) T protein:vir:10 76 I-KY-K---NVIYDIVSVIPTQDHTLL--IMWKRGEMNG 107 (107) T ss_pred E-EE-C---CeEEEEEeecCCCCCcEE--EEEEEeecCC Confidence 2 22 1 235999999887665432 2345555555 No 15 >protein:vir:107606 Length: 107 # NCBI annotation: head-tail adaptor protein # Family: family:all:116 # ACLAME annotation(s): phi:0000012 - phage head tail joining # MgeID: mge:1491 # MgeName: Gamma # Cross-refs: genbank:acc:YP_338190;genbank:gi:77020176;genbank:GeneID:3703737 Probab=76.63 E-value=0.092 Score=26.27 Aligned_cols=105 Identities=16% Similarity=0.171 Sum_probs=60.5 Q ss_pred CccccccCceeeeeccccccCCCcceeeecCCCeeEEEEEeccCCee--eeeeccccccceeeeeecccccccccccccE Q lcl|Aclame:pro 1 MRLKDSDLITVYLREPMNTQDDEGYSICGWGDPQPIRMNVQSAGGTV--NAQLYGKDIKYIKTCKYQGDLLAEGHGEGFG 78 (117) Q Consensus 1 MRLr~~~Lk~~~lrk~~~~~D~EG~~~~gY~d~ve~~anv~pAgG~v--qAeiYG~rL~yikn~~~~gd~l~~~~~e~dG 78 (117) |+-=+-+-+...+++....+|..|....+|.+-..+-|+|.|.+|+- +|.-=+....+.-.|+|.-+. ...+= T Consensus 1 M~~G~L~~rI~i~~~~~~~~d~~G~~~~~w~~~~~~wA~v~~~sg~e~~~a~~~~~~~t~~i~iR~~~~I-----~~~~r 75 (107) T protein:vir:10 1 MNPAKLDKRLTFQVKDENAKGPDGDPIDGYKDAFTVWGSFVYLKGRKYFEAAAANSEVQGETEIRNRDDV-----SADMK 75 (107) T ss_pred CCccccCccEEEEeceeeccCCCCccccceEeeEEEEEEEEecCchhheeccceeeeeeEEEEEEecCCC-----CcccE Confidence 44333333333333333445666778889988789999999999973 233334455555567776432 22222 Q ss_pred EEEcCCCCCCCCeEEEEEEecccceeEEEEeecccCcCC Q lcl|Aclame:pro 79 VCLKVSSSSDPDYKITAIQEFSTHKNVTLERIKRDEQND 117 (117) Q Consensus 79 iCl~v~~~~ePDYkIvaI~~ys~h~~i~LErir~~~~~~ 117 (117) | ++ . .=.|.|.+|.+...+.-+ .-+..++.|- T Consensus 76 i-~~-~---g~~y~I~~v~~~~~~~~~--l~~~~~~~~G 107 (107) T protein:vir:10 76 I-KY-K---NVIYDIVSVIPTQDHTLL--IMWKRGEMNG 107 (107) T ss_pred E-EE-C---CeEEEEEeecCCCCCcEE--EEEEEeecCC Confidence 2 22 1 235999999887665432 2345555555 No 16 >protein:vir:102856 Length: 107 # NCBI annotation: head-tail adaptor protein # Family: family:all:116 # ACLAME annotation(s): phi:0000012 - phage head tail joining # MgeID: mge:1492 # MgeName: Cherry # Cross-refs: genbank:acc:YP_338139;genbank:gi:77020229;genbank:GeneID:3703765 Probab=76.63 E-value=0.092 Score=26.27 Aligned_cols=105 Identities=16% Similarity=0.171 Sum_probs=60.5 Q ss_pred CccccccCceeeeeccccccCCCcceeeecCCCeeEEEEEeccCCee--eeeeccccccceeeeeecccccccccccccE Q lcl|Aclame:pro 1 MRLKDSDLITVYLREPMNTQDDEGYSICGWGDPQPIRMNVQSAGGTV--NAQLYGKDIKYIKTCKYQGDLLAEGHGEGFG 78 (117) Q Consensus 1 MRLr~~~Lk~~~lrk~~~~~D~EG~~~~gY~d~ve~~anv~pAgG~v--qAeiYG~rL~yikn~~~~gd~l~~~~~e~dG 78 (117) |+-=+-+-+...+++....+|..|....+|.+-..+-|+|.|.+|+- +|.-=+....+.-.|+|.-+. ...+= T Consensus 1 M~~G~L~~rI~i~~~~~~~~d~~G~~~~~w~~~~~~wA~v~~~sg~e~~~a~~~~~~~t~~i~iR~~~~I-----~~~~r 75 (107) T protein:vir:10 1 MNPAKLDKRLTFQVKDENAKGPDGDPIDGYKDAFTVWGSFVYLKGRKYFEAAAANSEVQGETEIRNRDDV-----SADMK 75 (107) T ss_pred CCccccCccEEEEeceeeccCCCCccccceEeeEEEEEEEEecCchhheeccceeeeeeEEEEEEecCCC-----CcccE Confidence 44333333333333333445666778889988789999999999973 233334455555567776432 22222 Q ss_pred EEEcCCCCCCCCeEEEEEEecccceeEEEEeecccCcCC Q lcl|Aclame:pro 79 VCLKVSSSSDPDYKITAIQEFSTHKNVTLERIKRDEQND 117 (117) Q Consensus 79 iCl~v~~~~ePDYkIvaI~~ys~h~~i~LErir~~~~~~ 117 (117) | ++ . .=.|.|.+|.+...+.-+ .-+..++.|- T Consensus 76 i-~~-~---g~~y~I~~v~~~~~~~~~--l~~~~~~~~G 107 (107) T protein:vir:10 76 I-KY-K---NVIYDIVSVIPTQDHTLL--IMWKRGEMNG 107 (107) T ss_pred E-EE-C---CeEEEEEeecCCCCCcEE--EEEEEeecCC Confidence 2 22 1 235999999887665432 2345555555 No 17 >protein:vir:102084 Length: 107 # NCBI annotation: head-tail adaptor # Family: family:all:116 # ACLAME annotation(s): phi:0000012 - phage head tail joining # MgeID: mge:1503 # MgeName: Fah # Cross-refs: genbank:acc:YP_512317;genbank:gi:89152486;genbank:GeneID:3953077 Probab=76.63 E-value=0.092 Score=26.27 Aligned_cols=105 Identities=16% Similarity=0.171 Sum_probs=60.5 Q ss_pred CccccccCceeeeeccccccCCCcceeeecCCCeeEEEEEeccCCee--eeeeccccccceeeeeecccccccccccccE Q lcl|Aclame:pro 1 MRLKDSDLITVYLREPMNTQDDEGYSICGWGDPQPIRMNVQSAGGTV--NAQLYGKDIKYIKTCKYQGDLLAEGHGEGFG 78 (117) Q Consensus 1 MRLr~~~Lk~~~lrk~~~~~D~EG~~~~gY~d~ve~~anv~pAgG~v--qAeiYG~rL~yikn~~~~gd~l~~~~~e~dG 78 (117) |+-=+-+-+...+++....+|..|....+|.+-..+-|+|.|.+|+- +|.-=+....+.-.|+|.-+. ...+= T Consensus 1 M~~G~L~~rI~i~~~~~~~~d~~G~~~~~w~~~~~~wA~v~~~sg~e~~~a~~~~~~~t~~i~iR~~~~I-----~~~~r 75 (107) T protein:vir:10 1 MNPAKLDKRLTFQVKDENAKGPDGDPIDGYKDAFTVWGSFVYLKGRKYFEAAAANSEVQGETEIRNRDDV-----SADMK 75 (107) T ss_pred CCccccCccEEEEeceeeccCCCCccccceEeeEEEEEEEEecCchhheeccceeeeeeEEEEEEecCCC-----CcccE Confidence 44333333333333333445666778889988789999999999973 233334455555567776432 22222 Q ss_pred EEEcCCCCCCCCeEEEEEEecccceeEEEEeecccCcCC Q lcl|Aclame:pro 79 VCLKVSSSSDPDYKITAIQEFSTHKNVTLERIKRDEQND 117 (117) Q Consensus 79 iCl~v~~~~ePDYkIvaI~~ys~h~~i~LErir~~~~~~ 117 (117) | ++ . .=.|.|.+|.+...+.-+ .-+..++.|- T Consensus 76 i-~~-~---g~~y~I~~v~~~~~~~~~--l~~~~~~~~G 107 (107) T protein:vir:10 76 I-KY-K---NVIYDIVSVIPTQDHTLL--IMWKRGEMNG 107 (107) T ss_pred E-EE-C---CeEEEEEeecCCCCCcEE--EEEEEeecCC Confidence 2 22 1 235999999887665432 2345555555 No 18 >protein:vir:102144 Length: 113 # NCBI annotation: phage head-tail adaptor, putative # Family: family:all:3858 # MgeID: mge:1641 # MgeName: phiSM101 # Cross-refs: genbank:acc:YP_699939;genbank:gi:110804032;genbank:GeneID:4206688 Probab=75.52 E-value=0.12 Score=25.59 Aligned_cols=105 Identities=12% Similarity=0.067 Sum_probs=62.6 Q ss_pred CccccccCceeeeeccccccCCCcceeeecCCCeeEEEEEeccCCe--eeeeeccccccceeeeeeccccccc---cccc Q lcl|Aclame:pro 1 MRLKDSDLITVYLREPMNTQDDEGYSICGWGDPQPIRMNVQSAGGT--VNAQLYGKDIKYIKTCKYQGDLLAE---GHGE 75 (117) Q Consensus 1 MRLr~~~Lk~~~lrk~~~~~D~EG~~~~gY~d~ve~~anv~pAgG~--vqAeiYG~rL~yikn~~~~gd~l~~---~~~e 75 (117) |+-=+-+-+ .-+.++..++|+.|....+|.+-.++.|.|.+.+|+ .+|.-=.....+--.++|.-+.... .... T Consensus 1 M~~G~L~~r-I~i~~~~~~~d~~G~~~~~w~~~~~~wA~v~~~~g~E~~~a~~~~~~~~~~f~iRy~~~i~~~~~~~it~ 79 (113) T protein:vir:10 1 MAECRLNER-IIIEELAIIQNSNGFEEEKWHEYYRCWSSFKKVKGSKFIAAKADNAENIVTFTIRYCNKVKILLDIEAIN 79 (113) T ss_pred CCccccCce-EEEEeeeeccCCCCCeecceEeEEEEEEEEEecCchheeeccceeeeeeEEEEEEecCCCcccccccCCC Confidence 543333322 344566889999999999998878999999999998 4454444555555567887543210 0111 Q ss_pred ccEEEEcCCCCCCCCeEEEEEEe-cccc--eeEEEEeec Q lcl|Aclame:pro 76 GFGVCLKVSSSSDPDYKITAIQE-FSTH--KNVTLERIK 111 (117) Q Consensus 76 ~dGiCl~v~~~~ePDYkIvaI~~-ys~h--~~i~LErir 111 (117) +.--++ + +=.|.|+||.+ ...| +.|.-|.|- T Consensus 80 -~~ri~~-~---g~~y~I~~i~~~~~~~~~l~i~~~~v~ 113 (113) T protein:vir:10 80 -KFRINF-K---GHYYKLEYVDDYDQGHEWVDLKAKIIS 113 (113) T ss_pred -CCeEEE-C---CeEEEEEecCCcccCCeEEEEEEEEeC Confidence 111121 1 22388998863 3444 444455555 No 19 >protein:vir:100244 Length: 109 # NCBI annotation: gp73 # Family: family:all:116 # ACLAME annotation(s): phi:0000012 - phage head tail joining # MgeID: mge:1619 # MgeName: Bcep176 # Cross-refs: genbank:acc:YP_355409;genbank:gi:77864699;genbank:GeneID:3725966 Probab=73.57 E-value=0.15 Score=25.16 Aligned_cols=105 Identities=13% Similarity=0.199 Sum_probs=66.5 Q ss_pred CccccccCceeeeeccccccCCCccee-eecCCCeeEEEEEeccCCeeeee--eccccccceeeeeeccccccccccccc Q lcl|Aclame:pro 1 MRLKDSDLITVYLREPMNTQDDEGYSI-CGWGDPQPIRMNVQSAGGTVNAQ--LYGKDIKYIKTCKYQGDLLAEGHGEGF 77 (117) Q Consensus 1 MRLr~~~Lk~~~lrk~~~~~D~EG~~~-~gY~d~ve~~anv~pAgG~vqAe--iYG~rL~yikn~~~~gd~l~~~~~e~d 77 (117) |+--+-+-+ +-+.++...+|+.|... .+|.+--.+.|+|.+.+|+-..+ -=+....+--.++|.-+. ...+ T Consensus 2 m~~g~L~~r-I~i~~~~~~~d~~G~~~~~~w~~~~~~wA~i~~~~g~e~~~a~~~~~~~~~~i~iR~~~~I-----~~~~ 75 (109) T protein:vir:10 2 LRSSDLTEF-IVIERKGGRTNENGEPLPDDWVTHDEVWASVRFVSGKEHVISGAVRSSAIASIRIRFREDI-----DSEM 75 (109) T ss_pred CCccccCcc-EEEEeeeeccCCCCCeeccceeeEEEEEEEEEecCchheeeccceeeeeeEEEEEEecCCC-----Cccc Confidence 655444333 44566888999999864 58998788999999998874332 223345555567776432 2333 Q ss_pred EEEEcCCCCCCCCeEEEEEEecccceeEEEEeecccCcCC Q lcl|Aclame:pro 78 GVCLKVSSSSDPDYKITAIQEFSTHKNVTLERIKRDEQND 117 (117) Q Consensus 78 GiCl~v~~~~ePDYkIvaI~~ys~h~~i~LErir~~~~~~ 117 (117) =| ++ . .=.|.|++|.|-..+..|+| ..+.|.-.= T Consensus 76 ri-~~-~---g~~y~I~~v~~~~~~~~l~i-~c~egv~~~ 109 (109) T protein:vir:10 76 RI-RY-G---DQLYDIVAVLPNRRKGSLDL-PVKVGEKYV 109 (109) T ss_pred EE-EE-C---CeEEEEEeeccCCCCcEEEE-EEEeeeccC Confidence 32 32 2 22499999988888877777 344444444 No 20 >protein:vir:3993 Length: 117 # NCBI annotation: unknown # Family: family:all:1030 # MgeID: mge:319 # MgeName: BK5-T # Cross-refs: genbank:acc:NP_116501;genbank:gi:14251134;genbank:GeneID:921310 Probab=71.08 E-value=0.17 Score=24.80 Aligned_cols=102 Identities=12% Similarity=0.098 Sum_probs=68.4 Q ss_pred ccccCceeeeeccccc------cCCCcceeeecCC-C-eeEEEEEeccCCeeeeeeccccccceee--eeeccccccccc Q lcl|Aclame:pro 4 KDSDLITVYLREPMNT------QDDEGYSICGWGD-P-QPIRMNVQSAGGTVNAQLYGKDIKYIKT--CKYQGDLLAEGH 73 (117) Q Consensus 4 r~~~Lk~~~lrk~~~~------~D~EG~~~~gY~d-~-ve~~anv~pAgG~vqAeiYG~rL~yikn--~~~~gd~l~~~~ 73 (117) +-+.++|.-|++++.. +|+.|.....+.- + ..+.|.+|.-..+=+=+..|-.|.-... ++++.. T Consensus 1 m~~~~~p~~~n~ri~Fg~~~~~~~~~g~~~~~~~~~~~f~~w~~~~t~t~~q~~~~~Gt~~e~T~~~vIRh~~~------ 74 (117) T protein:vir:39 1 MVKTYKPNDFNRKCKIGVTKTVTTPTGGKIEKIDPATVLNVRFAAKMRSLALQFQIIGTTTADTLDIAIRHNKL------ 74 (117) T ss_pred CCccccccccceeEEeeeecceecCCCCcccccEEeeEEEEEEEEeecccceeeeeecccccCcEEEEEEeCCC------ Confidence 5667788888776655 7777776654431 2 3688888888999999999999987665 455432 Q ss_pred ccccEEEEcCCCCCCCCeEEEEEEe-----cccceeEEEEeecccCc Q lcl|Aclame:pro 74 GEGFGVCLKVSSSSDPDYKITAIQE-----FSTHKNVTLERIKRDEQ 115 (117) Q Consensus 74 ~e~dGiCl~v~~~~ePDYkIvaI~~-----ys~h~~i~LErir~~~~ 115 (117) -.+..|+-.+... |+|++|-| +.++=.|+|.+..+..- T Consensus 75 -i~~~m~v~~~g~~---Y~I~~Is~Dd~~~~~~yD~iTlk~~~~~g~ 117 (117) T protein:vir:39 75 -VTKKMCVQIDDVL---YNIINISSDESAKLIKFDILTLQAKKKKGA 117 (117) T ss_pred -CCcccEEEECCeE---EEEeEeCCCCccCceeeeeEEEEEeeccCC Confidence 1333455555444 99999988 33334488876666444 No 21 >protein:vir:81177 Length: 109 # NCBI annotation: putative head-tail adaptor # Family: family:all:116 # ACLAME annotation(s): phi:0000012 - phage head tail joining # MgeID: mge:1892 # MgeName: Geobacillus virus E2 # Cross-refs: genbank:acc:YP_001285814;genbank:gi:148747735;genbank:GeneID:5247220 Probab=70.83 E-value=0.19 Score=24.51 Aligned_cols=105 Identities=15% Similarity=0.138 Sum_probs=64.3 Q ss_pred CccccccCceeeeeccccccCCCcceeeecCCCeeEEEEEeccCCeeeeeecc--ccccceeeeeecccccccccccccE Q lcl|Aclame:pro 1 MRLKDSDLITVYLREPMNTQDDEGYSICGWGDPQPIRMNVQSAGGTVNAQLYG--KDIKYIKTCKYQGDLLAEGHGEGFG 78 (117) Q Consensus 1 MRLr~~~Lk~~~lrk~~~~~D~EG~~~~gY~d~ve~~anv~pAgG~vqAeiYG--~rL~yikn~~~~gd~l~~~~~e~dG 78 (117) |+--+-+- .+-+.++...+|+.|....+|.+-..+.|+|.+.+|+-..+--+ ....+.-.++|.-+.. . +. T Consensus 1 M~~g~L~~-rI~i~~~~~~~d~~G~~~~~w~~~~~~wA~v~~~s~~e~~~a~~~~~~~~~~f~iR~~~~i~-----~-~~ 73 (109) T protein:vir:81 1 MNPGQFRH-KITLMKLVTTQDEIGNTIEEWQPVRTCWAAIKTVNGREYFAAASVQAERTYRFIIRYTPGIN-----E-TM 73 (109) T ss_pred CCccccCc-cEEEEeeeeeeCCCCCeecceeeEEEEEEEEEecCchheeeccceeeeeeEEEEEEeCCCCC-----c-cc Confidence 65433332 34556678899999999999998789999999999975433322 2334455577764421 1 22 Q ss_pred EEEcCCCCCCCCeEEEEEEe-cccceeEEEEeecccCcCC Q lcl|Aclame:pro 79 VCLKVSSSSDPDYKITAIQE-FSTHKNVTLERIKRDEQND 117 (117) Q Consensus 79 iCl~v~~~~ePDYkIvaI~~-ys~h~~i~LErir~~~~~~ 117 (117) --++ . . =.|.|.+|.+ ...+..|+|..- ++.+++ T Consensus 74 ri~~-~-g--~~y~I~~v~~~~~~~~~l~i~~~-e~~~~~ 108 (109) T protein:vir:81 74 KIDY-Q-G--RLFDIQSVLNDDEGKKTLTIIAT-ERVAAD 108 (109) T ss_pred EEEE-C-C--eEEEEEeecCCccCCcEEEEEEE-EeecCC Confidence 2233 2 2 2499999976 456666665443 334444 No 22 >protein:vir:5258 Length: 123 # NCBI annotation: hypothetical protein # Family: family:all:4880 # MgeID: mge:117 # MgeName: Aaphi23 # Cross-refs: genbank:acc:NP_852763;genbank:gi:31544038;uniprot:Q776V7;genbank:GeneID:2777139 Probab=70.66 E-value=0.21 Score=24.35 Aligned_cols=105 Identities=13% Similarity=0.077 Sum_probs=66.0 Q ss_pred Ccccccc-CceeeeeccccccCCCcceeeecCCCeeEEEEEeccCCe-eeeeeccccccceeeeeecccccccccccccE Q lcl|Aclame:pro 1 MRLKDSD-LITVYLREPMNTQDDEGYSICGWGDPQPIRMNVQSAGGT-VNAQLYGKDIKYIKTCKYQGDLLAEGHGEGFG 78 (117) Q Consensus 1 MRLr~~~-Lk~~~lrk~~~~~D~EG~~~~gY~d~ve~~anv~pAgG~-vqAeiYG~rL~yikn~~~~gd~l~~~~~e~dG 78 (117) =+|...| ++++-+++......+.| ..+++ .+..|.|.|||+++. +|--.=|+|+.=.+.+-.|- .|. .+ . T Consensus 8 ~v~ldpdF~~titv~R~~g~~~~~g-~~~~t-~~~t~~avVqP~~~~dlq~LpeG~ri~~sIkI~Tq~-~L~----vG-D 79 (123) T protein:vir:52 8 GRFLNSRFRQQITVQKQSGSHSASG-FDVRY-EKQQITAIVIPTSPNDVLLLPEGERYLPSIKVYTQQ-QLN----IG-D 79 (123) T ss_pred ccccCcccCceEEEEccCccEeCCc-ccccc-ccceEEEEEeeCChhhcccccccccccceEEEEecc-ccc----cc-c Confidence 1222333 34555566666666655 56665 466799999999975 34444588877777766664 222 23 3 Q ss_pred EEEcCCCCCCCCeEEEEEEecccceeEEEEeecccCcCC Q lcl|Aclame:pro 79 VCLKVSSSSDPDYKITAIQEFSTHKNVTLERIKRDEQND 117 (117) Q Consensus 79 iCl~v~~~~ePDYkIvaI~~ys~h~~i~LErir~~~~~~ 117 (117) +|++-+. .|+|++..+||+|--..==..|-+..+- T Consensus 80 ~vlw~G~----~YrVi~~~d~s~YGYy~~i~~~~~~t~~ 114 (123) T protein:vir:52 80 LVDYRGQ----TYKIKTAANWGDYGYYNNIGVRHSQTAK 114 (123) T ss_pred EEEeCCc----EEEEEEcCCccccceecceeecccccCc Confidence 7887432 6999999999987665555555544433 No 23 >protein:vir:1027 Length: 116 # NCBI annotation: Orf47 # Family: family:all:1030 # MgeID: mge:20 # MgeName: bIL286 # Cross-refs: genbank:acc:NP_076681;genbank:gi:13095790;genbank:GeneID:920343 Probab=69.44 E-value=0.17 Score=24.82 Aligned_cols=101 Identities=11% Similarity=0.017 Sum_probs=65.4 Q ss_pred ccccCceeeeeccccc------cCCCcceeeecCC-C-eeEEEEEeccCCeeeeeeccccccceee--eeeccccccccc Q lcl|Aclame:pro 4 KDSDLITVYLREPMNT------QDDEGYSICGWGD-P-QPIRMNVQSAGGTVNAQLYGKDIKYIKT--CKYQGDLLAEGH 73 (117) Q Consensus 4 r~~~Lk~~~lrk~~~~------~D~EG~~~~gY~d-~-ve~~anv~pAgG~vqAeiYG~rL~yikn--~~~~gd~l~~~~ 73 (117) +=+.++|.-|++++.. +|+.|.....+.- + ..+.|.+|.-..+=+=+..|-.|..... ++++... T Consensus 1 m~~~~~p~~ln~ri~FG~~~~~~~~~g~~~~~~~~v~~f~~w~~~~t~t~~q~~~~~Gt~ledT~~~vIRh~~~i----- 75 (116) T protein:vir:10 1 MVKTYKPNDFNRKCKIGVTKTVTVPSGGKIEKIDPATVLNVRFAAKMRSLALQFQIIGTTTADTFDIAIRHNKLV----- 75 (116) T ss_pred CCCcccccccceeEEeeeeeeeeCCCCCccccceeeeEEEEEEEEeecchheeeeeccccccCcEEEEEEeCCCC----- Confidence 5566777777765544 4565654443321 2 3678888888898889999999887665 4454321 Q ss_pred ccccEEEEcCCCCCCCCeEEEEEEe-----cccceeEEEEeecccC Q lcl|Aclame:pro 74 GEGFGVCLKVSSSSDPDYKITAIQE-----FSTHKNVTLERIKRDE 114 (117) Q Consensus 74 ~e~dGiCl~v~~~~ePDYkIvaI~~-----ys~h~~i~LErir~~~ 114 (117) ..+-.+.+ +... |+|++|-| +.++=.|+|.+..+|- T Consensus 76 -~~~m~v~~-~g~~---Y~I~~Is~Dd~~~~~~yD~iTlk~~~kga 116 (116) T protein:vir:10 76 -TKKMFVQI-DDVL---YNIINISSDESAKLIKFDILTLQAKKKGA 116 (116) T ss_pred -CcCcEEEE-CCeE---EEEEEeCCCCccCceeeeeEEEEEeeccC Confidence 12223333 4333 99999988 3333459999999988 No 24 >protein:vir:1385 Length: 107 # NCBI annotation: Gp8 protein # Family: family:all:3858 # MgeID: mge:314 # MgeName: phi3626 # Cross-refs: genbank:acc:NP_612837;genbank:gi:20065971;genbank:GeneID:935786 Probab=67.72 E-value=0.25 Score=23.90 Aligned_cols=102 Identities=8% Similarity=-0.065 Sum_probs=65.0 Q ss_pred CccccccCceeeeeccccccCCCcceeeecCCCeeEEEEEeccCCe--eeeeeccccccceeeeeecccccccccccccE Q lcl|Aclame:pro 1 MRLKDSDLITVYLREPMNTQDDEGYSICGWGDPQPIRMNVQSAGGT--VNAQLYGKDIKYIKTCKYQGDLLAEGHGEGFG 78 (117) Q Consensus 1 MRLr~~~Lk~~~lrk~~~~~D~EG~~~~gY~d~ve~~anv~pAgG~--vqAeiYG~rL~yikn~~~~gd~l~~~~~e~dG 78 (117) |+ +...+-+-++...+|..|+...+|.+-.++.|+|.+.+|+ .+|.-=.....+.=.|+|+.+........ +. T Consensus 1 ~~----~~hRI~i~~~~~~~D~~G~~~~~w~~~~~~WA~v~~~~g~E~~~a~~~~~~~~~~f~iRy~~~i~~~~~t~-~~ 75 (107) T protein:vir:13 1 MA----RYERISIKKLEEKNIKGRRQEECLIPFYDCWAEILDLYGQELYGALQMKLENTIIFKIRYCKKVEELRNKE-NF 75 (107) T ss_pred CC----cceEEEEEeeeeeeCCCCCeecceEeEEEEEEEEecCCchheeecceeheeeeEEEEEEecCCccccccCc-Cc Confidence 43 3334666788889999999999999988999999999997 45554455566666788886542211011 11 Q ss_pred EEEcCCCCCCCCeEEEEEEec-ccce--eEEEEeec Q lcl|Aclame:pro 79 VCLKVSSSSDPDYKITAIQEF-STHK--NVTLERIK 111 (117) Q Consensus 79 iCl~v~~~~ePDYkIvaI~~y-s~h~--~i~LErir 111 (117) -=++ +. =-|.|+||-+- ..|. .|.-+++= T Consensus 76 Ri~~-~g---~~y~I~~v~~~~~~~~~l~i~c~eV~ 107 (107) T protein:vir:13 76 IVEW-QG---RKYEIYYPDFLGYNKQFVKLKCKEVL 107 (107) T ss_pred EEEE-CC---eEEEEEecCCcccCCeEEEEEEEEeC Confidence 1122 21 23999999664 3444 44445555 No 25 >protein:vir:1436 Length: 108 # NCBI annotation: hypothetical protein # Family: family:all:116 # ACLAME annotation(s): phi:0000012 - phage head tail joining # MgeID: mge:30 # MgeName: phiE125 # Cross-refs: genbank:acc:NP_536365;genbank:gi:17975170;genbank:GeneID:929148 Probab=65.56 E-value=0.28 Score=23.60 Aligned_cols=105 Identities=14% Similarity=0.162 Sum_probs=62.4 Q ss_pred CccccccCceeeeeccccccCCCcceee-ecCCCeeEEEEEeccCCeeeeeec--cccccceeeeeeccccccccccccc Q lcl|Aclame:pro 1 MRLKDSDLITVYLREPMNTQDDEGYSIC-GWGDPQPIRMNVQSAGGTVNAQLY--GKDIKYIKTCKYQGDLLAEGHGEGF 77 (117) Q Consensus 1 MRLr~~~Lk~~~lrk~~~~~D~EG~~~~-gY~d~ve~~anv~pAgG~vqAeiY--G~rL~yikn~~~~gd~l~~~~~e~d 77 (117) |+-=+-+- .+-+.++...+|+.|.... .|.+--.+.|+|.+.+|+-..+-- +....+.-.++|..+. ...+ T Consensus 1 M~~G~L~~-rI~i~~~~~~~d~~G~~~~~~w~~~~~~wA~i~~~~g~e~~~a~~~~~~~t~~i~iR~~~~I-----~~~~ 74 (108) T protein:vir:14 1 MEAGKLKE-RIVIERPSGETNENDEPIPGAWVVHARPWADVRFLNGKEHVISGAVRGATVASMRIRYRAGI-----GDQM 74 (108) T ss_pred CCccccCc-cEEEEeeeeccCCCCCeeccceeeEEEEEEEEEecCchheeeccceeeeeeEEEEEEecCCC-----Cccc Confidence 54333332 2445666788999998775 699888999999999997544433 3344455557776432 2222 Q ss_pred EEEEcCCCCCCCCeEEEEEEecccceeEEEEeecccCcCC Q lcl|Aclame:pro 78 GVCLKVSSSSDPDYKITAIQEFSTHKNVTLERIKRDEQND 117 (117) Q Consensus 78 GiCl~v~~~~ePDYkIvaI~~ys~h~~i~LErir~~~~~~ 117 (117) =| ++ + .=.|.|.+|.|...+..++|. ++.|+--- T Consensus 75 ri-~~-~---g~~y~I~~v~~~~~~~~l~i~-~~~~v~~~ 108 (108) T protein:vir:14 75 RI-RY-D---GRLYDITAVLPARKRGYLDLS-VKVGEKYV 108 (108) T ss_pred EE-EE-C---CeEEEEEeeccCCCCCEEEEE-EEeeeecC Confidence 22 22 1 124888888887777666663 22222222 No 26 >protein:vir:80342 Length: 108 # NCBI annotation: gp9, phage head-tail adaptor, putative # Family: family:all:116 # ACLAME annotation(s): phi:0000012 - phage head tail joining # MgeID: mge:1881 # MgeName: phi644-2 # Cross-refs: genbank:acc:YP_001111088;genbank:gi:134288641;genbank:GeneID:4960589 Probab=55.87 E-value=0.47 Score=22.38 Aligned_cols=105 Identities=15% Similarity=0.140 Sum_probs=61.6 Q ss_pred CccccccCceeeeeccccccCCCcceee-ecCCCeeEEEEEeccCCeeeeee--ccccccceeeeeeccccccccccccc Q lcl|Aclame:pro 1 MRLKDSDLITVYLREPMNTQDDEGYSIC-GWGDPQPIRMNVQSAGGTVNAQL--YGKDIKYIKTCKYQGDLLAEGHGEGF 77 (117) Q Consensus 1 MRLr~~~Lk~~~lrk~~~~~D~EG~~~~-gY~d~ve~~anv~pAgG~vqAei--YG~rL~yikn~~~~gd~l~~~~~e~d 77 (117) |+-=+-+-+ +.+.++..++|+.|+... .|.+--.+.|+|.+.+|+-.... =+....+.-.++|.-+. ...+ T Consensus 1 M~~G~L~~r-I~i~~~~~~~d~~G~~~~~~w~~~~~~wA~v~~~~~~e~~~a~~~~~~~~~~i~iR~~~~I-----~~~~ 74 (108) T protein:vir:80 1 MKTGKLKER-IVIERPSGETNENDEPIPGAWIVHARPWADVLFLNGKEHVISGAVRGATIASMRIRYRAGI-----DEQM 74 (108) T ss_pred CCccccCcc-EEEEeeeeccCCCCCeeccceeeEEEEEEEEEecCchheeeccceeeeeeEEEEEEecCCC-----Cccc Confidence 544333333 445567788999998776 69988899999999888744332 22334455557776432 2222 Q ss_pred EEEEcCCCCCCCCeEEEEEEecccceeEEEEeecccCcCC Q lcl|Aclame:pro 78 GVCLKVSSSSDPDYKITAIQEFSTHKNVTLERIKRDEQND 117 (117) Q Consensus 78 GiCl~v~~~~ePDYkIvaI~~ys~h~~i~LErir~~~~~~ 117 (117) =| ++ + .=.|.|++|.|...+..++|. .+.|+-.= T Consensus 75 Ri-~~-~---g~~y~I~~v~~~~~~~~l~i~-~~e~v~~~ 108 (108) T protein:vir:80 75 RV-RY-D---GRLYDITAVLPARKRGYLDLS-VKVGEKYV 108 (108) T ss_pred EE-EE-C---CeEEEEEeeccCCCCCEEEEE-EEeeeecC Confidence 22 22 1 124888888887766666663 23333333 No 27 >protein:vir:3616 Length: 103 # NCBI annotation: ORF39 # Family: family:all:666 # MgeID: mge:74 # MgeName: TP901-1 # Cross-refs: genbank:acc:NP_112702;genbank:gi:13786570;genbank:GeneID:921068 Probab=54.81 E-value=0.49 Score=22.26 Aligned_cols=102 Identities=13% Similarity=0.107 Sum_probs=72.9 Q ss_pred CccccccCceeeeeccccccCCCcceeeecCC-CeeEEEEEeccCCeeeeeeccccccceeeeeecccccccccccccEE Q lcl|Aclame:pro 1 MRLKDSDLITVYLREPMNTQDDEGYSICGWGD-PQPIRMNVQSAGGTVNAQLYGKDIKYIKTCKYQGDLLAEGHGEGFGV 79 (117) Q Consensus 1 MRLr~~~Lk~~~lrk~~~~~D~EG~~~~gY~d-~ve~~anv~pAgG~vqAeiYG~rL~yikn~~~~gd~l~~~~~e~dGi 79 (117) ||.-. --+++..+-....|++=..++|-.. -.++-|||..-|=.-+.++||.==.--|-++.+. ..++.+|= T Consensus 1 MRy~~--~V~F~~~s~~~~YnP~tg~~~~~~~~~~~~~aNVTdlgt~rs~~lFG~i~~~~kVIRl~~-----~i~~~~~~ 73 (103) T protein:vir:36 1 MRYLD--EVTFIKESPDSHYDPDLGEWVEKEPTRTVFSANITDIGTDRSVEVFGDIKKGAKVMRMMP-----LFNMPKYD 73 (103) T ss_pred Ccccc--eEEEEEeCCCCeeCCCCCCccCCeeEEEEEEeecccccchhheeecchhhcCeEEEEecC-----CCCcCccc Confidence 76532 2333333345667777666666553 4588899999999999999998777777777753 34565565 Q ss_pred EEcCCCCCCCCeEEEEEEecccceeEEEEeecc Q lcl|Aclame:pro 80 CLKVSSSSDPDYKITAIQEFSTHKNVTLERIKR 112 (117) Q Consensus 80 Cl~v~~~~ePDYkIvaI~~ys~h~~i~LErir~ 112 (117) -|.++.. -|+++.++.+.+--++-|+...+ T Consensus 74 yi~i~~k---kY~~~t~r~~~~~~~~iv~Ev~~ 103 (103) T protein:vir:36 74 YIEFDNK---KWALMTYRNPSERNTFILQEVSQ 103 (103) T ss_pred EEEECCc---EEEEEEeeccccCcEEEEEEecC Confidence 5556654 39999999999877888888877 No 28 >protein:vir:2346 Length: 126 # NCBI annotation: gp16 # Family: family:all:2818 # MgeID: mge:51 # MgeName: Bxb1 # Cross-refs: genbank:acc:NP_075283;genbank:gi:12657870;genbank:GeneID:920135 Probab=51.02 E-value=0.43 Score=22.58 Aligned_cols=99 Identities=23% Similarity=0.278 Sum_probs=54.5 Q ss_pred Cccccc---------cCceeeeeccccccCCCcceeeecC-CCeeEEEEEeccCCee----eeee----ccccccceeee Q lcl|Aclame:pro 1 MRLKDS---------DLITVYLREPMNTQDDEGYSICGWG-DPQPIRMNVQSAGGTV----NAQL----YGKDIKYIKTC 62 (117) Q Consensus 1 MRLr~~---------~Lk~~~lrk~~~~~D~EG~~~~gY~-d~ve~~anv~pAgG~v----qAei----YG~rL~yikn~ 62 (117) |-|-.+ ...++..--....+|++||....=| +||+..|++|++|-+. -||+ +++.=-| .| T Consensus 1 mslld~g~~y~~p~d~~~~v~VYPe~~v~D~dGNt~~~Ps~~gI~~~ArfQv~~qSgTsarRaE~d~~G~~te~V~--~~ 78 (126) T protein:vir:23 1 MSLLDRGGTYGSPEDGFDPVTVYPEVTRKDRLGNTLVGPSLTGIETVARFQVQGQSGTSARRAEMDDIGDMTEQVY--TM 78 (126) T ss_pred CccccCCcccCCCcccCcceEecceEEEeeCCCCeeecCCCCCceeEEEEEecCccccccchhhccCCCCCCceEE--EE Confidence 988877 2234445456778999999999866 4999999999996552 2344 4433222 22 Q ss_pred eecccc---c-----ccccccccEEEEcCCCCCCC-CeEEEEEEecccceeEEEEee Q lcl|Aclame:pro 63 KYQGDL---L-----AEGHGEGFGVCLKVSSSSDP-DYKITAIQEFSTHKNVTLERI 110 (117) Q Consensus 63 ~~~gd~---l-----~~~~~e~dGiCl~v~~~~eP-DYkIvaI~~ys~h~~i~LEri 110 (117) ++.++. | .+=.++.+++-- +| +|.= | +=..|..+++.|. T Consensus 79 r~~r~f~~eL~a~sqveW~G~RW~l~G------dp~~y~s-s--r~t~~~~ytv~R~ 126 (126) T protein:vir:23 79 RLPRSFTTELKSGSEVVWRGERWGVYG------EPRRYKG-S--RRIAHLEYTVRRF 126 (126) T ss_pred EeecCCchhhccceeeeecceEEEeec------ChhhcCC-C--CceEEEEEEEEeC Confidence 222221 1 111334444433 22 1210 0 1134677777777 No 29 >protein:vir:10366 Length: 124 # NCBI annotation: conserved phage protein; annotated as head-tail joining in some phages # Family: family:all:7034 # MgeID: mge:183 # MgeName: Xp10 # Cross-refs: genbank:acc:NP_858958;genbank:gi:32128423;genbank:GeneID:2648383 Probab=49.42 E-value=0.64 Score=21.65 Aligned_cols=113 Identities=13% Similarity=0.093 Sum_probs=62.0 Q ss_pred CccccccCce-eeeeccccccCCCcceeeecCCCeeEEEEEeccCCee--e---eeeccc-cccceeeeeeccccccccc Q lcl|Aclame:pro 1 MRLKDSDLIT-VYLREPMNTQDDEGYSICGWGDPQPIRMNVQSAGGTV--N---AQLYGK-DIKYIKTCKYQGDLLAEGH 73 (117) Q Consensus 1 MRLr~~~Lk~-~~lrk~~~~~D~EG~~~~gY~d~ve~~anv~pAgG~v--q---AeiYG~-rL~yikn~~~~gd~l~~~~ 73 (117) |=++--+|+. +-|-++..++|+.|+...+|.+-..+-|+|.+.+|+= . ++--.+ ...+.-.++|.-.. ..++ T Consensus 1 m~M~aG~L~~RI~iq~~~~~~D~~G~~~~~W~~~~~vWA~v~~~sg~E~~~~~~~a~~~~s~~t~~i~iR~r~~~-~~~i 79 (124) T protein:vir:10 1 MPISAGKLNTRAVLQRRQDGTDEWGAPKHVWLEVGAFYTNPKNDTGMGAIRSSVGSGVPANIVNYSLEVRSETIR-RLDP 79 (124) T ss_pred CCCCccccCccEEEEecccccCCCCCeecceEeEEEEEEEEecCchhhhhhhhhhccceeeeeEEEEEEEeeecc-CCCC Confidence 6655555543 4455678889999999999999889999999998851 1 111111 23344456664211 1122 Q ss_pred ccccEEEEcCC--CCCCCCeEEEEEEe-cccceeEEEEeecccCcCC Q lcl|Aclame:pro 74 GEGFGVCLKVS--SSSDPDYKITAIQE-FSTHKNVTLERIKRDEQND 117 (117) Q Consensus 74 ~e~dGiCl~v~--~~~ePDYkIvaI~~-ys~h~~i~LErir~~~~~~ 117 (117) ...+=| +|-. ...+--|.|+||-| ...|.-++|-- +. .-|| T Consensus 80 t~~mRi-~~~~~~~~~g~iy~I~~V~~d~~~r~~l~L~c-~~-g~~~ 123 (124) T protein:vir:10 80 QPDDRL-LIRVPFTARDMILSVTGVILDFADASHAYILA-QA-GTNE 123 (124) T ss_pred CccceE-EeCCccccCCeEEEEeecCCCCCCCcEEEEEE-Ee-cCCC Confidence 222222 1211 11123488888775 44565555543 22 2233 No 30 >protein:vir:1272 Length: 119 # NCBI annotation: hypothetical protein # Family: family:all:116 # ACLAME annotation(s): phi:0000012 - phage head tail joining # MgeID: mge:329 # MgeName: phi-105 # Cross-refs: genbank:acc:NP_690764;genbank:gi:22855004;genbank:GeneID:955243 Probab=42.91 E-value=0.87 Score=20.93 Aligned_cols=110 Identities=18% Similarity=0.188 Sum_probs=65.7 Q ss_pred CccccccCce-eeeeccccccCCCcceeeecCCCeeEEEEEec---cCC--eeeeeeccccccceeeeeecccccccccc Q lcl|Aclame:pro 1 MRLKDSDLIT-VYLREPMNTQDDEGYSICGWGDPQPIRMNVQS---AGG--TVNAQLYGKDIKYIKTCKYQGDLLAEGHG 74 (117) Q Consensus 1 MRLr~~~Lk~-~~lrk~~~~~D~EG~~~~gY~d~ve~~anv~p---AgG--~vqAeiYG~rL~yikn~~~~gd~l~~~~~ 74 (117) |.++--+|+. +.+.++...+|+.|....+|.+-..+.|+|-. .+| ..+|.-=.....+.-.++|.-+ +. T Consensus 1 M~m~aG~L~~rI~i~~~~~~~D~~G~~~~~w~~~~~~wA~v~~~~~l~g~E~~~a~~~~~~~~~~i~iRy~~~-----I~ 75 (119) T protein:vir:12 1 MRKKISQLRHRLTFQKKNETQDEEGNWNATYVDLFTVWGAVEGAGSLGNSESMIAGALGVKTPKKITVRYRKD-----IK 75 (119) T ss_pred CCCCccccCceEEEEeeeeccCCCCCeecceEeEEEEEEEEeecCccchhheeecceeeeeeEEEEEEEeCCC-----CC Confidence 7766666643 55677788999999999999988888888842 233 3444444445666667887643 23 Q ss_pred cccEEEEcCC-CCCCCCeEEEEEE-ecccceeEEEEeecccCcCC Q lcl|Aclame:pro 75 EGFGVCLKVS-SSSDPDYKITAIQ-EFSTHKNVTLERIKRDEQND 117 (117) Q Consensus 75 e~dGiCl~v~-~~~ePDYkIvaI~-~ys~h~~i~LErir~~~~~~ 117 (117) ..+=|.--.. ....=-|.|.||- +...|..++|.--+- .+| T Consensus 76 ~~~Ri~~~~~~~~~g~~y~I~~v~~~~~~~~~l~l~c~e~--~~~ 118 (119) T protein:vir:12 76 PNMRIVKRVPKDKTERVFDILDTNDPDDQEEELEILCQEV--GIN 118 (119) T ss_pred ccceEeeccccccCCeEEEEEecCCCccCCeEEEEEEEEe--ecC Confidence 3333321100 0111229999986 556665555544332 222 No 31 >protein:vir:4229 Length: 122 # NCBI annotation: predicted 14.0Kd protein # Family: family:all:2818 # MgeID: mge:89 # MgeName: L5 # Cross-refs: genbank:acc:NP_039684;swissprot:sw:q05226;genbank:gi:9625450;uniprot:Q05226;genbank:GeneID:2942924 Probab=36.37 E-value=0.86 Score=20.93 Aligned_cols=101 Identities=17% Similarity=0.145 Sum_probs=51.8 Q ss_pred CccccccC--ceeeeeccccccCCCcceeeecC-CCeeEEEEEeccCCeeee--------------eecccccc--ceee Q lcl|Aclame:pro 1 MRLKDSDL--ITVYLREPMNTQDDEGYSICGWG-DPQPIRMNVQSAGGTVNA--------------QLYGKDIK--YIKT 61 (117) Q Consensus 1 MRLr~~~L--k~~~lrk~~~~~D~EG~~~~gY~-d~ve~~anv~pAgG~vqA--------------eiYG~rL~--yikn 61 (117) |-|-...- .+|..---....|++||..+.=| ++|+..|++|++|-+.-. .+|-.+++ +.+- T Consensus 1 mslld~g~~y~~viVYPee~~~D~DGNt~t~PS~~GIp~~Ar~Qv~~qsgTsarraE~d~~G~~~erVy~mr~prsf~~e 80 (122) T protein:vir:42 1 MSLLDTGARYQTCIVYPEEMVIDSDGNKRTRPSNTGIPAIARFQVANQSGTSARRAEQDNEGFETEKVYRMRFPRSFTKE 80 (122) T ss_pred CccccCCCCccceEEcCceEEEeCCCCceecCCCCCcceeeeEEecCCccccccccccCCCCcchheeeeeecCcccccc Confidence 98887755 56666667788999999999888 589999999997644322 23333322 1122 Q ss_pred eeecccccc-cccccccEEEEcCCCCCCC-CeEEEEEEecccceeEEEEee Q lcl|Aclame:pro 62 CKYQGDLLA-EGHGEGFGVCLKVSSSSDP-DYKITAIQEFSTHKNVTLERI 110 (117) Q Consensus 62 ~~~~gd~l~-~~~~e~dGiCl~v~~~~eP-DYkIvaI~~ys~h~~i~LEri 110 (117) |-+-|-... +=.++.+++-= || +|+= -+=..|..++++|- T Consensus 81 hg~L~aqs~ieW~G~RW~l~G------dp~~y~s---s~~tar~~ytvkr~ 122 (122) T protein:vir:42 81 HGILGAQSQIEWRDQRWALFG------DATVYDS---SPALARVDYTIKRY 122 (122) T ss_pred cccccccceeeECCeEEEEec------ccccccC---CcceEEEEEEEEeC Confidence 222221110 11233333322 11 1110 00023444444444 No 32 >protein:vir:1890 Length: 110 # NCBI annotation: gp9 # Family: family:all:116 # ACLAME annotation(s): phi:0000012 - phage head tail joining # MgeID: mge:41 # MgeName: HK022 # Cross-refs: genbank:acc:NP_037670;genbank:gi:9634128;genbank:GeneID:1262503 Probab=35.71 E-value=1.2 Score=20.12 Aligned_cols=105 Identities=18% Similarity=0.217 Sum_probs=60.2 Q ss_pred CccccccCceeeeeccccccCCC-cceeeecCCCeeEEEEEeccCCeeeeeeccc--cccceeeeeeccccccccccccc Q lcl|Aclame:pro 1 MRLKDSDLITVYLREPMNTQDDE-GYSICGWGDPQPIRMNVQSAGGTVNAQLYGK--DIKYIKTCKYQGDLLAEGHGEGF 77 (117) Q Consensus 1 MRLr~~~Lk~~~lrk~~~~~D~E-G~~~~gY~d~ve~~anv~pAgG~vqAeiYG~--rL~yikn~~~~gd~l~~~~~e~d 77 (117) |+--+-+-+ +-+.++...+|+. |....+|.+--..-|.|.+.+|+-..+.-++ ...+.-.++|.-+. ...+ T Consensus 1 M~~G~L~~r-I~i~~~~~~~d~~~G~~~~~~~~~~~~wA~v~~~~~~e~~~a~~~~~~~~~~~~iR~~~~I-----~~~~ 74 (110) T protein:vir:18 1 MQAGKLRHR-ITLQEPVKVQNPTTGAVINTWRDVATVRAEVSPLSAREFIAAQASQGEITTRIVIRYRAGV-----TRKH 74 (110) T ss_pred CCccccCcc-EEEEeeeeeecCCCCccccceeeeEEEEEEEEecCchheeecceeeeeeeEEEEEEecCCC-----Cccc Confidence 553333322 4456667788876 6778899988899999999999855444333 34444457766432 1222 Q ss_pred EEEEcCCCCCCCCeEEEEEEe--cccceeEEEEeecccCcC Q lcl|Aclame:pro 78 GVCLKVSSSSDPDYKITAIQE--FSTHKNVTLERIKRDEQN 116 (117) Q Consensus 78 GiCl~v~~~~ePDYkIvaI~~--ys~h~~i~LErir~~~~~ 116 (117) -=++ . . =.|.|++|.+ -..|.-|+|..-+-.+.- T Consensus 75 -ri~~-~-g--~~y~I~~v~~d~~~~~~~l~i~~~e~~~~G 110 (110) T protein:vir:18 75 -RILF-R-G--AVYNIHGVLPDPKSGREYLTLPCSEGVNDG 110 (110) T ss_pred -EEEE-C-C--eEEEEEeccCCcccCCeEEEEEEEEeccCC Confidence 2233 2 2 2499999964 445555555443322111 No 33 >protein:vir:99571 Length: 131 # NCBI annotation: hypothetical protein # Family: family:all:7161 # MgeID: mge:1544 # MgeName: BcepF1 # Cross-refs: genbank:acc:YP_001039798;genbank:gi:126011048;genbank:GeneID:4818266 Probab=34.64 E-value=0.45 Score=22.47 Aligned_cols=95 Identities=18% Similarity=0.216 Sum_probs=50.1 Q ss_pred CccccccCce-eeeeccccccCCCcceeeecCCCeeEEEEEeccCCeeeeeecccccc--ce--------eeee--eccc Q lcl|Aclame:pro 1 MRLKDSDLIT-VYLREPMNTQDDEGYSICGWGDPQPIRMNVQSAGGTVNAQLYGKDIK--YI--------KTCK--YQGD 67 (117) Q Consensus 1 MRLr~~~Lk~-~~lrk~~~~~D~EG~~~~gY~d~ve~~anv~pAgG~vqAeiYG~rL~--yi--------kn~~--~~gd 67 (117) |-++==-+.| .|+|-..-++++-|+.+..|.+|++|++++||+.= ..-.-+|..-. |. .+.. +-|| T Consensus 11 ~A~~VI~~Q~V~y~rf~~Rt~n~~gq~i~~y~~p~~i~gS~Q~V~~-~~v~~~GLd~~~~Yv~lfts~~i~~iqRg~agD 89 (131) T protein:vir:99 11 QAASVIALTPVPYLRFTQRVLNPARQWITTYAAAVDVPMSVQRVPR-NKYVQFGLEFQRNYVRLFAPIEMVDLDRDCGGD 89 (131) T ss_pred HHhhhhccccchhhcccccccccccceeeeecCCccceeeEEecCh-hheeecCcceeeeEEEEeecCcceecccCCCCC Confidence 3333333333 46677788999999999999999999999999863 33333443321 11 1110 1122 Q ss_pred ccccc-------------cccccEEEEcCCCCCCCCeEEEEEEecccce Q lcl|Aclame:pro 68 LLAEG-------------HGEGFGVCLKVSSSSDPDYKITAIQEFSTHK 103 (117) Q Consensus 68 ~l~~~-------------~~e~dGiCl~v~~~~ePDYkIvaI~~ys~h~ 103 (117) .|.=+ -+-+++.||.|+--...|-| .+.+ T Consensus 90 ~liwnGrr~~v~g~~dW~~QDGW~~~lcv~~Gi~~~~~-------~~~~ 131 (131) T protein:vir:99 90 MIIWHGRQHKIESQNTWYLQDGWAMSLAVDLGIRSDQK-------GNPL 131 (131) T ss_pred EEEECCeEEEecccceeeeeccceEEEEEEeecccCcC-------CCCC Confidence 22111 12366777766522221111 1111 No 34 >protein:vir:5977 Length: 109 # NCBI annotation: hypothetical protein # Family: family:all:788 # MgeID: mge:125 # MgeName: SPP1 # Cross-refs: genbank:acc:NP_690677;genbank:geneid:6329133;genbank:gi:22855071;interpro:IPR013045;uniprot:O48446;genbank:GeneID:955315 Probab=31.33 E-value=1.5 Score=19.61 Aligned_cols=104 Identities=13% Similarity=0.115 Sum_probs=60.7 Q ss_pred CccccccC-ceeeeeccccccCCCcceeeecCCCeeEEEEEeccCCe--eeeeeccccccceeeeeeccccccccccccc Q lcl|Aclame:pro 1 MRLKDSDL-ITVYLREPMNTQDDEGYSICGWGDPQPIRMNVQSAGGT--VNAQLYGKDIKYIKTCKYQGDLLAEGHGEGF 77 (117) Q Consensus 1 MRLr~~~L-k~~~lrk~~~~~D~EG~~~~gY~d~ve~~anv~pAgG~--vqAeiYG~rL~yikn~~~~gd~l~~~~~e~d 77 (117) |- .+| +.+-+-++..++|+.|....+|.+-..+-|+|.|.+|+ ..|.-=-....+--.++|.-+. ...+ T Consensus 1 ~~---~~L~~RI~i~~~~~~~D~~G~~~~~w~~~~~~WA~v~~~sg~E~~~a~~~~~~~~~~i~iRy~~~I-----~~~~ 72 (109) T protein:vir:59 1 MY---EEFPDVITFQSYVEQSNGEGGKTYKWVDEFTAAAHVQPISQEEYYKAQQLQTPIGYNIYTPYDDRI-----DKKM 72 (109) T ss_pred Cc---cccCccEEEEeeeeeeCCCCCeeeeeEeeEEEEEEEecCChhheeeccccceeeEEEEEEeeCCCC-----Cccc Confidence 32 222 23556677888999999999999888999999999987 4444334445555567776442 1222 Q ss_pred EEEEcCCCCCCCCeEEEEEEe--cccceeEEEEeecccCcCC Q lcl|Aclame:pro 78 GVCLKVSSSSDPDYKITAIQE--FSTHKNVTLERIKRDEQND 117 (117) Q Consensus 78 GiCl~v~~~~ePDYkIvaI~~--ys~h~~i~LErir~~~~~~ 117 (117) =| ++ . .--|.|+||-+ -+.|.-+.|+-..-|-.+- T Consensus 73 Ri-~~-~---gr~y~I~~v~~d~~~~~~~l~~~~~e~g~~~g 109 (109) T protein:vir:59 73 RV-IY-R---GKIVTFIGDPVDLSGLQEITRIKGKEDGAYVG 109 (109) T ss_pred EE-EE-C---CeEEEEEeccCCCCCCeEEEEEEEEEeeccCC Confidence 22 22 1 12388888732 2345555554333322222 No 35 >protein:vir:742 Length: 102 # NCBI annotation: unknown # Family: family:all:666 # MgeID: mge:14 # MgeName: Tuc2009 # Cross-refs: genbank:acc:NP_108719;genbank:gi:13487841;genbank:GeneID:920874 Probab=31.16 E-value=1.5 Score=19.59 Aligned_cols=101 Identities=14% Similarity=0.104 Sum_probs=70.8 Q ss_pred CccccccCceeeeeccccccCCCcceeeecCC-CeeEEEEEeccCCeeeeeeccccccceeeeeecccccccccccccEE Q lcl|Aclame:pro 1 MRLKDSDLITVYLREPMNTQDDEGYSICGWGD-PQPIRMNVQSAGGTVNAQLYGKDIKYIKTCKYQGDLLAEGHGEGFGV 79 (117) Q Consensus 1 MRLr~~~Lk~~~lrk~~~~~D~EG~~~~gY~d-~ve~~anv~pAgG~vqAeiYG~rL~yikn~~~~gd~l~~~~~e~dGi 79 (117) ||.-. --+++..+-....|++=..++|-.. -.++-|||..-|=.-+.++||.==.--|-++.+.- .++-++- T Consensus 1 MRy~~--~V~F~~~s~~~~YnP~tg~~~~~~~~~~~~~aNVTdlgt~rs~~lFG~i~~~~kViRl~~~-----~~~~~~~ 73 (102) T protein:vir:74 1 MRYLD--EVTFIKGSPDSHYDPDLGEWVEKEPTRAVFSANITDIGTDRSVEVFGDIKKGAKVMRMMPL-----FTMPEYD 73 (102) T ss_pred Ccccc--eEEEEEeCCCCeeCCCCCCccCCceEEEEEEeecccccchhheeecchhhcCeeEEEEecC-----CCCCceE Confidence 76532 2333333445667777666666554 35889999999999999999987777777887641 2233455 Q ss_pred EEcCCCCCCCCeEEEEEEecccceeEEEEeec Q lcl|Aclame:pro 80 CLKVSSSSDPDYKITAIQEFSTHKNVTLERIK 111 (117) Q Consensus 80 Cl~v~~~~ePDYkIvaI~~ys~h~~i~LErir 111 (117) -|.+++.. |+++.++.+.+--++-|+... T Consensus 74 ~i~~~~kk---Y~~~t~r~~~~~~~~iv~Ev~ 102 (102) T protein:vir:74 74 YIEFDNKK---WALTTYRNPSKRNTFILQEVN 102 (102) T ss_pred EEEeCCeE---EEEEEEeecccCcEEEEEecC Confidence 66666544 999999999987777787777 No 36 >protein:vir:2434 Length: 122 # NCBI annotation: gp20 # Family: family:all:2818 # MgeID: mge:52 # MgeName: D29 # Cross-refs: genbank:acc:NP_046836;genbank:gi:9630404;genbank:GeneID:1261606 Probab=30.71 E-value=1.6 Score=19.53 Aligned_cols=101 Identities=18% Similarity=0.190 Sum_probs=52.4 Q ss_pred CccccccC--ceeeeeccccccCCCcceeeecC-CCeeEEEEEeccCCeeee--------------eecccccc--ceee Q lcl|Aclame:pro 1 MRLKDSDL--ITVYLREPMNTQDDEGYSICGWG-DPQPIRMNVQSAGGTVNA--------------QLYGKDIK--YIKT 61 (117) Q Consensus 1 MRLr~~~L--k~~~lrk~~~~~D~EG~~~~gY~-d~ve~~anv~pAgG~vqA--------------eiYG~rL~--yikn 61 (117) |-|-...- .+|..---....|++||..+.=| ++|+..|++|++|-+.-. .+|-.+++ +.+- T Consensus 1 mslld~~~~yd~viVYPe~~~~D~DGNt~t~PS~~GI~~~Ar~Qv~~qsgTsarraE~d~~G~~~erVy~~r~pr~f~~e 80 (122) T protein:vir:24 1 MSLLDTGARYQPVLVYPEELVIDADGNKKTQPSKTPIQAIARFQVANQSGTSARRAEQDNGGFTTEKVYRMRFPRSFTKE 80 (122) T ss_pred CccccCCCCccceEEcCceEEEeCCCCceecCCCCCcceeeeEEecCcccccccccccCCCCcchheeeeeecccccccc Confidence 98887755 55655567788999999999888 599999999996644322 23333322 1111 Q ss_pred eeeccccc-ccccccccEEEEcCCCCCCC-CeEEEEEEecccceeEEEEee Q lcl|Aclame:pro 62 CKYQGDLL-AEGHGEGFGVCLKVSSSSDP-DYKITAIQEFSTHKNVTLERI 110 (117) Q Consensus 62 ~~~~gd~l-~~~~~e~dGiCl~v~~~~eP-DYkIvaI~~ys~h~~i~LEri 110 (117) |-+-|-.. .+=.++.+++-= || +|+= = +=..|..++++|. T Consensus 81 hg~L~aqs~veW~G~RW~l~G------dp~~y~s--s-~rtar~~ytv~r~ 122 (122) T protein:vir:24 81 HGILGAQTQIEWKGQRWALFG------DATEYDS--S-PALARVDYTIKRF 122 (122) T ss_pred cccccccceeeecceEEEEec------chhccCC--C-cceEEEEEEEEeC Confidence 22111110 011233333322 11 1110 0 0123555555555 No 37 >protein:vir:7775 Length: 122 # NCBI annotation: gp20 # Family: family:all:2818 # MgeID: mge:149 # MgeName: Bxz2 # Cross-refs: genbank:acc:NP_817609;genbank:gi:29566039;genbank:GeneID:1259233 Probab=28.42 E-value=1.7 Score=19.25 Aligned_cols=101 Identities=17% Similarity=0.156 Sum_probs=52.1 Q ss_pred CccccccC--ceeeeeccccccCCCcceeeecC-CCeeEEEEEeccCCeeee--------------eecccccc--ceee Q lcl|Aclame:pro 1 MRLKDSDL--ITVYLREPMNTQDDEGYSICGWG-DPQPIRMNVQSAGGTVNA--------------QLYGKDIK--YIKT 61 (117) Q Consensus 1 MRLr~~~L--k~~~lrk~~~~~D~EG~~~~gY~-d~ve~~anv~pAgG~vqA--------------eiYG~rL~--yikn 61 (117) |-|-...- .+|..---....|++||..+.=| ++|+..|++|++|-+.-. .+|-.+++ +.+- T Consensus 1 mslld~~~~yd~viVYPe~~~~D~DGNt~t~PS~~GI~~~Ar~Qv~~qsgTsarraE~d~~G~~~erVy~~r~pr~f~~e 80 (122) T protein:vir:77 1 MSLLDGGPAYEDVIVYPEEVVTDEDGNTQTRPSKTGIPAKARFQVQGQSGTSARRAEQDNEGFESEKVYRMRFPRSWDAE 80 (122) T ss_pred CccccCCCCccceEEcCceEEEeCCCCceecCCCCCcceeeeEEecCcccccccccccCCCCcchheeeeeecccccccc Confidence 98887755 55655567788999999999888 599999999996644322 23333322 1111 Q ss_pred eeeccccc-ccccccccEEEEcCCCCCCC-CeEEEEEEecccceeEEEEee Q lcl|Aclame:pro 62 CKYQGDLL-AEGHGEGFGVCLKVSSSSDP-DYKITAIQEFSTHKNVTLERI 110 (117) Q Consensus 62 ~~~~gd~l-~~~~~e~dGiCl~v~~~~eP-DYkIvaI~~ys~h~~i~LEri 110 (117) |-+-|-.. .+=.++.+++-= || +|+= = +=..|..++++|- T Consensus 81 hg~L~aqs~veW~G~RW~l~G------dp~~y~s--s-~rtar~~ytv~r~ 122 (122) T protein:vir:77 81 HGVLGAQSEIEWRGVRWALFG------DVNFYNS--S-RRTARIDYTVKRY 122 (122) T ss_pred cccccccceeeecceEEEEec------chhccCC--C-cceEEEEEEEEeC Confidence 22111110 011233333322 11 1110 0 0123455555555 No 38 >protein:vir:193 Length: 112 # NCBI annotation: putative head-tail adaptor # Family: family:all:116 # ACLAME annotation(s): phi:0000012 - phage head tail joining # MgeID: mge:6 # MgeName: HK97 # Cross-refs: genbank:acc:NP_037703;genbank:gi:9634168;genbank:GeneID:1262533 Probab=28.15 E-value=1.8 Score=19.22 Aligned_cols=109 Identities=10% Similarity=0.058 Sum_probs=60.5 Q ss_pred CccccccCceeeeeccccccCCCcceeeecCCCeeEEEEEeccCCeeeeeecc--ccccceeeeeecccccccccccccE Q lcl|Aclame:pro 1 MRLKDSDLITVYLREPMNTQDDEGYSICGWGDPQPIRMNVQSAGGTVNAQLYG--KDIKYIKTCKYQGDLLAEGHGEGFG 78 (117) Q Consensus 1 MRLr~~~Lk~~~lrk~~~~~D~EG~~~~gY~d~ve~~anv~pAgG~vqAeiYG--~rL~yikn~~~~gd~l~~~~~e~dG 78 (117) |+-=+-+- ..-+.++...+|+.|....+|.+--.+.|+|.+.+|+-..+.-+ ....+--.++|.-+. .....-.+. T Consensus 1 M~~G~L~~-rI~i~~~~~~~d~~G~~~~~w~~~~~~wA~v~~~sg~e~~~a~~~~~~~~~~i~iR~~~~I-~~~~ri~~~ 78 (112) T protein:vir:19 1 MEPGRFRN-RVKILTFTTSRDPSGQPVESWTGGNPVPAEVKGISGREQLSGGAETAQATIRVWMRFRSEL-NASSRLEVL 78 (112) T ss_pred CCccccCc-cEEEEeeeeeeCCCCCeecceEeEEEEEEEEEecCchheeeccceeeeeeEEEEEEecCCC-Ccccceeec Confidence 54333332 34455677789999999999998789999999988874433333 334444457775332 111111111 Q ss_pred EEEcCCCCCCCCeEEEEEE-ecccceeEEEEeecccCcC Q lcl|Aclame:pro 79 VCLKVSSSSDPDYKITAIQ-EFSTHKNVTLERIKRDEQN 116 (117) Q Consensus 79 iCl~v~~~~ePDYkIvaI~-~ys~h~~i~LErir~~~~~ 116 (117) .=++ + .=.|.|++|- +...|.-++|.--+ |-+. T Consensus 79 ~~~~-~---g~~y~I~~v~~~~~~~~~l~l~c~e-gv~~ 112 (112) T protein:vir:19 79 SGPY-K---GQVLNIIGPPVANATGTRLEILCKT-GAEK 112 (112) T ss_pred ceee-C---CeEEEEEecCCCccCCcEEEEEEEE-cccC Confidence 0012 2 2249999985 44555555554322 1111 No 39 >protein:vir:3971 Length: 103 # NCBI annotation: hypothetical protein # Family: family:all:666 # MgeID: mge:83 # MgeName: ul36 # Cross-refs: genbank:acc:NP_663679;genbank:gi:21716116;genbank:GeneID:951216 Probab=26.84 E-value=1.9 Score=19.05 Aligned_cols=102 Identities=13% Similarity=0.126 Sum_probs=70.9 Q ss_pred CccccccCceeeeeccccccCCCcceeeecCC-CeeEEEEEeccCCeeeeeeccccccceeeeeecccccccccccccEE Q lcl|Aclame:pro 1 MRLKDSDLITVYLREPMNTQDDEGYSICGWGD-PQPIRMNVQSAGGTVNAQLYGKDIKYIKTCKYQGDLLAEGHGEGFGV 79 (117) Q Consensus 1 MRLr~~~Lk~~~lrk~~~~~D~EG~~~~gY~d-~ve~~anv~pAgG~vqAeiYG~rL~yikn~~~~gd~l~~~~~e~dGi 79 (117) ||.-. --+++..+-....|++=..++|-.. -.++-|||..-|=.-+.++||.==.--|-++.+. . .++-+.- T Consensus 1 MRy~~--~V~F~~~s~~~~YnP~tg~~~~~~~~~~~~~aNVTdlgt~rs~~lFG~i~~~~kVIRl~~-~----~~~~~~~ 73 (103) T protein:vir:39 1 MRFLD--EVTFIKESPDSHYDPDLGEWVEKEPTRAVFSANITDIGTDRSIKVFGDIKQGAKVMRMMP-L----FTMPEYD 73 (103) T ss_pred Ccccc--eEEEEEeCCCCeeCCCCCCccCCceEEEEEEeecccccchhheeecchhccCeeEEEeeC-C----CCCCceE Confidence 76532 2333333345667777666666554 3588899999999999999998777777788764 1 1222344 Q ss_pred EEcCCCCCCCCeEEEEEEecccceeEEEEeecc Q lcl|Aclame:pro 80 CLKVSSSSDPDYKITAIQEFSTHKNVTLERIKR 112 (117) Q Consensus 80 Cl~v~~~~ePDYkIvaI~~ys~h~~i~LErir~ 112 (117) -|..++. -|+++.++.+.+--++-++...+ T Consensus 74 ~i~~~~k---kY~~~t~r~~~~~~~~iv~Evn~ 103 (103) T protein:vir:39 74 YIEFDNK---KWALMTYRNPSERNTFILQEVNQ 103 (103) T ss_pred EEEcCCe---EEEEEEEeecccCcEEEEEEecC Confidence 5555544 49999999999877888888877 No 40 >protein:vir:4161 Length: 112 # NCBI annotation: unknown # Family: family:all:11763 # MgeID: mge:87 # MgeName: psiM2 # Cross-refs: genbank:acc:NP_046970;genbank:gi:9630540;genbank:GeneID:1261714 Probab=21.86 E-value=2 Score=18.92 Aligned_cols=102 Identities=18% Similarity=0.302 Sum_probs=52.0 Q ss_pred Cc---------cccccCceeeeeccccccCCCcceeeecCCCeeEEEEEeccCCeeeeeeccccccceeeeeeccc-ccc Q lcl|Aclame:pro 1 MR---------LKDSDLITVYLREPMNTQDDEGYSICGWGDPQPIRMNVQSAGGTVNAQLYGKDIKYIKTCKYQGD-LLA 70 (117) Q Consensus 1 MR---------Lr~~~Lk~~~lrk~~~~~D~EG~~~~gY~d~ve~~anv~pAgG~vqAeiYG~rL~yikn~~~~gd-~l~ 70 (117) |. |++-.+-.-.+-+-....|.-|..+.+=. ..+|++-..--.|- .--|-|+++.. |..- ++. T Consensus 1 mkpsvtrF~~Li~~YG~~~~LiH~~~~~RD~RGQPi~ED~-~~~iK~FFHVN~G~-ERiI~GQ~i~D-----YDAY~LI~ 73 (112) T protein:vir:41 1 MKPSVTRFNQLIYKYGMDAKLIHKVMNGRDERGQPITEDT-ETSIKVFFHVNTGN-ERLILGQQVVD-----YDAYALIV 73 (112) T ss_pred CCcchHHHHHHHHHhCCchhhhhhhhccccccCCCccccC-CceEEEEEEeeCCC-ceeeecceeec-----ccceEEEe Confidence 11 12222221222334455666666553322 23344433333331 12355666532 1111 223 Q ss_pred cccccccEEEEcCCCCCCCCeEEEEEEecccceeEEEEeecc Q lcl|Aclame:pro 71 EGHGEGFGVCLKVSSSSDPDYKITAIQEFSTHKNVTLERIKR 112 (117) Q Consensus 71 ~~~~e~dGiCl~v~~~~ePDYkIvaI~~ys~h~~i~LErir~ 112 (117) -+-+.+||--+-|+.+ -|+|.||-|-+||+-+.|.||.- T Consensus 74 ~~~~i~~~D~I~i~~~---~Y~V~aiI~~RTH~E~~L~Riet 112 (112) T protein:vir:41 74 KTLNVNDDDEIEVDGK---RYRVGAVIPQRTHQELHLRRVET 112 (112) T ss_pred eeeeeccCCeEEECCc---eEEEeeeccccccceeeeeeecC Confidence 3334444444555644 49999999999999999999998 No 41 >protein:vir:97076 Length: 125 # NCBI annotation: putative head-to-tail joining protein # Family: family:all:7034 # MgeID: mge:1653 # MgeName: OP1 # Cross-refs: genbank:acc:YP_453567;genbank:gi:84662602;genbank:GeneID:5142491 Probab=21.81 E-value=2.5 Score=18.36 Aligned_cols=113 Identities=14% Similarity=0.121 Sum_probs=61.0 Q ss_pred CccccccCce-eeeeccccccCCCcceeeecCCCeeEEEEEeccCCeeeee-ecc-----ccccceeeeeeccccccccc Q lcl|Aclame:pro 1 MRLKDSDLIT-VYLREPMNTQDDEGYSICGWGDPQPIRMNVQSAGGTVNAQ-LYG-----KDIKYIKTCKYQGDLLAEGH 73 (117) Q Consensus 1 MRLr~~~Lk~-~~lrk~~~~~D~EG~~~~gY~d~ve~~anv~pAgG~vqAe-iYG-----~rL~yikn~~~~gd~l~~~~ 73 (117) |=++--+|+. +-+-++..++|+.|....+|.+-..+.|+|.|.+|+-.-. ... ....+.-.++|.-. ...++ T Consensus 2 m~M~aG~L~~RI~iq~~~~~~D~~G~~~~~W~~~~~vWA~v~~~sG~E~~~~~~~a~~~~s~~t~~i~iRyr~~-~~~~i 80 (125) T protein:vir:97 2 MPISAGKLNTRAVLQRRQEGTDEWGAPKHVWLEVGAFYTNPKNDTGMGAIRSSVGSGVPANIVNYSLEVRSETI-RRLDP 80 (125) T ss_pred CccCccccCceEEEEeeecccCCCCCeecceEeeEEEEEEEecCCcceeehhhhhhceeeeeeEEEEEEEeeec-ccCCC Confidence 5444444443 3445577889999999999999889999999988854211 111 11223334666421 11122 Q ss_pred ccccEEEEcCCC--CCCCCeEEEEEEe-cccceeEEEEeecccCcCC Q lcl|Aclame:pro 74 GEGFGVCLKVSS--SSDPDYKITAIQE-FSTHKNVTLERIKRDEQND 117 (117) Q Consensus 74 ~e~dGiCl~v~~--~~ePDYkIvaI~~-ys~h~~i~LErir~~~~~~ 117 (117) ...+=| +|-.. ..+=-|.|+||-| ...|.-++|=- +..-|| T Consensus 81 t~~mRi-~~~~r~~~~~~iydI~~v~~d~~~~~~l~L~C--e~g~~~ 124 (125) T protein:vir:97 81 QPDDRL-LIRVPFTARDMILSVTGVILDFADSSHAYILA--QAGTNE 124 (125) T ss_pred CccceE-EECCccccCceeEEEeeecCCccCCcEEEEEE--EecCCC Confidence 233333 22100 0111388888776 45566665532 333444 No 42 >protein:vir:100134 Length: 109 # NCBI annotation: gp8 # Family: family:all:116 # ACLAME annotation(s): phi:0000012 - phage head tail joining # MgeID: mge:1639 # MgeName: phi1026b # Cross-refs: genbank:acc:NP_945038;genbank:gi:38707898;genbank:GeneID:2744181 Probab=21.48 E-value=2.6 Score=18.31 Aligned_cols=103 Identities=9% Similarity=0.063 Sum_probs=62.3 Q ss_pred CccccccCceeeeeccccccCCCcceee-ecCCCeeEEEEEeccCCeeeeeeccc--cccceeeeeeccccccccccccc Q lcl|Aclame:pro 1 MRLKDSDLITVYLREPMNTQDDEGYSIC-GWGDPQPIRMNVQSAGGTVNAQLYGK--DIKYIKTCKYQGDLLAEGHGEGF 77 (117) Q Consensus 1 MRLr~~~Lk~~~lrk~~~~~D~EG~~~~-gY~d~ve~~anv~pAgG~vqAeiYG~--rL~yikn~~~~gd~l~~~~~e~d 77 (117) |+--+-+ +.+-+.++...+|+.|.... .|.+--.+.|+|.|.+|+-..+.-+. ...+.-.++|.-+ +.. + T Consensus 2 m~~G~L~-~rI~i~~~~~~~d~~G~~~~~~w~~~~~~wA~v~~~s~~e~~~a~~~~~~~~~~~~iR~~~~-----I~~-~ 74 (109) T protein:vir:10 2 LKAGELT-ERITIEKRGGGVNENGEPLPGDWVEHASVWANVRFLSGKEYVVSGAIHSSAIASMRIRFRRD-----VDS-E 74 (109) T ss_pred CCccccC-ccEEEEeeeeeeCCCCCeeccceEEEEEEEEEEEecCchheeeccceeeeeEEEEEEEeCCC-----CCc-c Confidence 5544433 33556777899999999777 49888889999999999855444333 3334445676633 222 3 Q ss_pred EEEEcCCCCCCCCeEEEEEEeccc--ceeEEEEeecccC Q lcl|Aclame:pro 78 GVCLKVSSSSDPDYKITAIQEFST--HKNVTLERIKRDE 114 (117) Q Consensus 78 GiCl~v~~~~ePDYkIvaI~~ys~--h~~i~LErir~~~ 114 (117) +-.++ . .=.|.|.+|.|-.. |+.|..+...+.= T Consensus 75 ~ri~~-~---g~~y~I~~v~~d~~~~~~~l~~~~~e~~~ 109 (109) T protein:vir:10 75 MRIRH-D---GRLYDIAAVLPNRRQGYVDLSVKVGEKYV 109 (109) T ss_pred cEEEE-C---CeEEEEeecCCCCCCCeEEEEEEEEEeeC Confidence 34444 2 22488888865444 3444444444444 Done!