Query lcl|Aclame:protein:vir:98468|NCBI_annot:ORF5|genbank:acc:NP_958283;genbank:gi:41057257;uniprot:Q38598;genbank:GeneID:2732852 Match_columns 90 No_of_seqs 3 out of 6 Neff 1.5 Searched_HMMs 1612 Date Sun Dec 1 05:54:12 2013 Command /home/guerois/workspace/virfam/python/lib/hhsearch//hhsearch2 -i .//seq/seq_47 -d /home/guerois/workspace/virfam/python/profile_database/capsid_neck_tail.hhm -glob -cpu 7 -o .//seq/HHR/seq_47_vs_rec_db.hhr No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM 1 protein:vir:98468 Length: 90 # 100.0 2.1E-56 1.3E-59 325.8 7.7 90 1-90 1-90 (90) 2 protein:vir:9763 Length: 89 # 91.1 0.0012 7.2E-07 36.7 4.1 73 1-86 12-89 (89) 3 protein:vir:9578 Length: 78 # 91.0 0.0014 8.9E-07 36.2 4.5 77 1-86 1-78 (78) 4 protein:vir:1642 Length: 78 # 90.9 0.0013 7.9E-07 36.5 4.1 77 1-86 1-78 (78) 5 protein:vir:94763 Length: 78 # 90.9 0.0013 7.9E-07 36.5 4.1 77 1-86 1-78 (78) 6 protein:vir:78163 Length: 92 # 38.5 0.42 0.00026 22.6 3.7 87 1-90 1-92 (92) 7 protein:vir:99101 Length: 142 10.3 4 0.0025 17.3 2.8 90 1-90 1-108 (142) 8 protein:vir:8669 Length: 142 # 10.3 4 0.0025 17.3 2.8 90 1-90 1-108 (142) 9 protein:vir:106506 Length: 137 6.9 6.9 0.0043 16.0 2.6 87 1-90 1-102 (137) 10 protein:vir:102441 Length: 137 6.5 6 0.0037 16.3 2.1 88 2-90 1-105 (137) No 1 >protein:vir:98468 Length: 90 # NCBI annotation: ORF5 # Family: family:all:32435 # MgeID: mge:1589 # MgeName: VWB # Cross-refs: genbank:acc:NP_958283;genbank:gi:41057257;uniprot:Q38598;genbank:GeneID:2732852 Probab=100.00 E-value=2.1e-56 Score=325.82 Aligned_cols=90 Identities=100% Similarity=1.340 Sum_probs=90.0 Q ss_pred CCCCCccccccchhhHHhhcChhHHHHHHHHHHHHHHHHhhhccccccceecccccccceecceeeccccCCChhhHHHH Q lcl|Aclame:pro 1 MAREGFQLSTTRRNVAAFLRSPGVRQAVEASTREIEAAARQAAEPDAGQFRTDITEESNRVRGAVIGDYATADPEDSRRA 80 (90) Q Consensus 1 mar~~fr~~~nRRniA~FLrsp~tr~~iE~kTRa~E~AA~aaa~~D~GQFRTDv~~~~~RvRGAVIGDY~t~~pE~sRra 80 (90) ||||||||||||||||+|||||+||++||+|||++|+||+|||+|||||||||||||+|||||||||||+|+|||+||++ T Consensus 1 mar~~fr~~~nRRniA~FLrsp~tr~~iE~kTRa~E~AA~aaa~~D~GQFRTDv~~~~~RvRGAVIGDY~t~~pE~sRra 80 (90) T protein:vir:98 1 MAREGFQLSTTRRNVAAFLRSPGVRQAVEASTREIEAAARQAAEPDAGQFRTDITEESNRVRGAVIGDYATADPEDSRRA 80 (90) T ss_pred CCCCCccccccchhhHHhhcChhHHHHHHHHHHHHHHHHhhhccccccceecccccccceecceeeccccCCChhhHHHH Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred HHHhhhcccC Q lcl|Aclame:pro 81 LLRGLEGGRT 90 (90) Q Consensus 81 LLRgLdg~R~ 90 (90) |||||||+|| T Consensus 81 LLRgLdg~R~ 90 (90) T protein:vir:98 81 LLRGLEGGRT 90 (90) T ss_pred HHHhhhcccC Confidence 9999999999 No 2 >protein:vir:9763 Length: 89 # NCBI annotation: hypothetical protein # Family: family:all:1171 # MgeID: mge:175 # MgeName: 315.3 # Cross-refs: genbank:acc:NP_795525;genbank:gi:28876279;genbank:GeneID:1257820 Probab=91.09 E-value=0.0012 Score=36.69 Aligned_cols=73 Identities=19% Similarity=0.375 Sum_probs=54.2 Q ss_pred CCCCCccccccchhhHHhhcChhHHHHHHHHHHHHHHHHhhhccccccceecccccccceecceeeccccCCChhhH--- Q lcl|Aclame:pro 1 MAREGFQLSTTRRNVAAFLRSPGVRQAVEASTREIEAAARQAAEPDAGQFRTDITEESNRVRGAVIGDYATADPEDS--- 77 (90) Q Consensus 1 mar~~fr~~~nRRniA~FLrsp~tr~~iE~kTRa~E~AA~aaa~~D~GQFRTDv~~~~~RvRGAVIGDY~t~~pE~s--- 77 (90) |+. +++..|+-++...|+||++.+.|..+-..+-..| |+-|..|+--|-.|..+.|-= .++-.- T Consensus 12 Msk--vkfklN~aGvr~llks~~iQa~l~~~A~~I~~rA-------g~gY~adv~~Gk~Ra~a~V~t----~t~~A~~~N 78 (89) T protein:vir:97 12 MSK--FKFKLNKAGVAELMKSSEMQQVLTTKATAIRERC-------GDGYAQDIHVGKNRANAMVSA----KTIKAKKDN 78 (89) T ss_pred hhc--ceeeeCHHHHHHHhcChhHHHHHHHHHHHHHHhh-------ccccccccccCCcccceEecc----CChHHHHhh Confidence 998 5555999999999999999999876654443222 555999999999999999843 232222 Q ss_pred --HHHHHHhhh Q lcl|Aclame:pro 78 --RRALLRGLE 86 (90) Q Consensus 78 --RraLLRgLd 86 (90) ---||.++. T Consensus 79 ~KHNTLLKAv~ 89 (89) T protein:vir:97 79 SKNNTLLKAVR 89 (89) T ss_pred hhhhhhhhhcC Confidence 234788887 No 3 >protein:vir:9578 Length: 78 # NCBI annotation: gp44 # Family: family:all:1171 # MgeID: mge:171 # MgeName: SM1 # Cross-refs: genbank:acc:NP_862883;genbank:gi:32469475;genbank:GeneID:1461320 Probab=90.98 E-value=0.0014 Score=36.16 Aligned_cols=77 Identities=13% Similarity=0.215 Sum_probs=54.4 Q ss_pred CCCCCccccccchhhHHhhcChhHHHHHHHHHHHHHHHHhhhccccccceecccccccceecceeecc-ccCCChhhHHH Q lcl|Aclame:pro 1 MAREGFQLSTTRRNVAAFLRSPGVRQAVEASTREIEAAARQAAEPDAGQFRTDITEESNRVRGAVIGD-YATADPEDSRR 79 (90) Q Consensus 1 mar~~fr~~~nRRniA~FLrsp~tr~~iE~kTRa~E~AA~aaa~~D~GQFRTDv~~~~~RvRGAVIGD-Y~t~~pE~sRr 79 (90) |+. +++..|+-++...|+||++.+.|..+-..+-..| |+-|..|+--|-.|..+.|-=+ +..-+-+.--- T Consensus 1 ms~--~k~klN~aGvr~ll~s~~~Qa~l~~~A~~i~~ra-------g~gY~~d~~~gk~Ra~a~V~~~t~~A~~~N~khN 71 (78) T protein:vir:95 1 MSN--TKIKLIGAGVGALLKSKEIQDILNKEATVIKKRC-------GPGYEQDSHVGKTRANAMIYPTTRKAKRDNLKNN 71 (78) T ss_pred CCc--ceeeeCHHHHHHHhcChhHHHHHHHHHHHHHHhh-------ccccccccccCCcccceEeecCChHHHHhhhhhh Confidence 998 5555999999999999999999976655443222 5559999999999999998432 11111111223 Q ss_pred HHHHhhh Q lcl|Aclame:pro 80 ALLRGLE 86 (90) Q Consensus 80 aLLRgLd 86 (90) -||.++. T Consensus 72 TLLKAv~ 78 (78) T protein:vir:95 72 TLLKAVH 78 (78) T ss_pred hhhhhcC Confidence 4788877 No 4 >protein:vir:1642 Length: 78 # NCBI annotation: hypothetical protein # Family: family:all:1171 # MgeID: mge:33 # MgeName: r1t # Cross-refs: genbank:acc:NP_695063;genbank:gi:23455754;genbank:GeneID:955475 Probab=90.87 E-value=0.0013 Score=36.45 Aligned_cols=77 Identities=17% Similarity=0.366 Sum_probs=53.5 Q ss_pred CCCCCccccccchhhHHhhcChhHHHHHHHHHHHHHHHHhhhccccccceecccccccceecceeecc-ccCCChhhHHH Q lcl|Aclame:pro 1 MAREGFQLSTTRRNVAAFLRSPGVRQAVEASTREIEAAARQAAEPDAGQFRTDITEESNRVRGAVIGD-YATADPEDSRR 79 (90) Q Consensus 1 mar~~fr~~~nRRniA~FLrsp~tr~~iE~kTRa~E~AA~aaa~~D~GQFRTDv~~~~~RvRGAVIGD-Y~t~~pE~sRr 79 (90) |+. +++.-|+-++++.|+||++.+.|..+-..+..+| |.-|..||--|-.|.++.|-=+ +-.-.-+.--. T Consensus 1 Ms~--~kfklN~aGv~~llks~~iQa~l~~~a~~i~~ra-------G~gy~~dv~vgk~Ra~a~V~~~t~~A~~~N~KhN 71 (78) T protein:vir:16 1 MAK--NLFKLNRSGVASMMKSPEMQAILKEKASAVKQRC-------GPGYGQDMHVGKNRANAMVFAETYQAKRDNMKNN 71 (78) T ss_pred CCc--ceeEeCHHHHHHHhcCchhHHHHHHHHHHHHHhh-------cCcceeccccCCcccceEeccCChhhHHhhhhcc Confidence 988 5666899999999999999999876544443222 4449999999999999998532 11111111223 Q ss_pred HHHHhhh Q lcl|Aclame:pro 80 ALLRGLE 86 (90) Q Consensus 80 aLLRgLd 86 (90) -||.+|. T Consensus 72 TLLKAv~ 78 (78) T protein:vir:16 72 TILKAVR 78 (78) T ss_pred hhhhhcC Confidence 4788777 No 5 >protein:vir:94763 Length: 78 # NCBI annotation: unknown # Family: family:all:1171 # MgeID: mge:1529 # MgeName: phi LC3 # Cross-refs: genbank:acc:NP_996710;genbank:gi:45597425;genbank:GeneID:2769032 Probab=90.87 E-value=0.0013 Score=36.45 Aligned_cols=77 Identities=17% Similarity=0.366 Sum_probs=53.5 Q ss_pred CCCCCccccccchhhHHhhcChhHHHHHHHHHHHHHHHHhhhccccccceecccccccceecceeecc-ccCCChhhHHH Q lcl|Aclame:pro 1 MAREGFQLSTTRRNVAAFLRSPGVRQAVEASTREIEAAARQAAEPDAGQFRTDITEESNRVRGAVIGD-YATADPEDSRR 79 (90) Q Consensus 1 mar~~fr~~~nRRniA~FLrsp~tr~~iE~kTRa~E~AA~aaa~~D~GQFRTDv~~~~~RvRGAVIGD-Y~t~~pE~sRr 79 (90) |+. +++.-|+-++++.|+||++.+.|..+-..+..+| |.-|..||--|-.|.++.|-=+ +-.-.-+.--. T Consensus 1 Ms~--~kfklN~aGv~~llks~~iQa~l~~~a~~i~~ra-------G~gy~~dv~vgk~Ra~a~V~~~t~~A~~~N~KhN 71 (78) T protein:vir:94 1 MAK--NLFKLNRSGVASMMKSPEMQAILKEKASAVKQRC-------GPGYGQDMHVGKNRANAMVFAETYQAKRDNMKNN 71 (78) T ss_pred CCc--ceeEeCHHHHHHHhcCchhHHHHHHHHHHHHHhh-------cCcceeccccCCcccceEeccCChhhHHhhhhcc Confidence 988 5666899999999999999999876544443222 4449999999999999998532 11111111223 Q ss_pred HHHHhhh Q lcl|Aclame:pro 80 ALLRGLE 86 (90) Q Consensus 80 aLLRgLd 86 (90) -||.+|. T Consensus 72 TLLKAv~ 78 (78) T protein:vir:94 72 TILKAVR 78 (78) T ss_pred hhhhhcC Confidence 4788777 No 6 >protein:vir:78163 Length: 92 # NCBI annotation: hypothetical protein # Family: family:all:29889 # MgeID: mge:1847 # MgeName: Min1 # Cross-refs: genbank:acc:YP_001294805;genbank:gi:149882826;genbank:GeneID:5309191 Probab=38.47 E-value=0.42 Score=22.64 Aligned_cols=87 Identities=28% Similarity=0.394 Sum_probs=62.1 Q ss_pred CCCCCccccccchhhHHhhcChhHHHHHHHHHHHHHHHHhhhccccccceeccc--ccccc--eecceeec-cccCCChh Q lcl|Aclame:pro 1 MAREGFQLSTTRRNVAAFLRSPGVRQAVEASTREIEAAARQAAEPDAGQFRTDI--TEESN--RVRGAVIG-DYATADPE 75 (90) Q Consensus 1 mar~~fr~~~nRRniA~FLrsp~tr~~iE~kTRa~E~AA~aaa~~D~GQFRTDv--~~~~~--RvRGAVIG-DY~t~~pE 75 (90) ||- .|. ||-.-.-..|+||++|+|+.-...++-.-|.+.|.-|-|-||.-+ |.-.+ |---.|+| |-.|---| T Consensus 1 mad-aft--pNp~~FDqIl~s~~VrALt~gaAe~aLa~AKAsAPVDTGAYRDGL~iE~~q~~~RtT~MVVG~D~KTlLvE 77 (92) T protein:vir:78 1 MAD-AFT--PNPTWFDQIMRTPKVRALVDGVAEETLADAKASAPVDTGAYRDGLHIEHRQGRSRETAMVVGSDEKTLLIE 77 (92) T ss_pred CCC-ccC--CChhHHHHhhcccchhhhhhhhhhhhhhhhcccCcccccccccccchhhhhccccceeEEeecCcceeeee Confidence 664 454 999999999999999999876655555667777888999999754 33333 33346777 44455556 Q ss_pred hHHHHHHHhhhcccC Q lcl|Aclame:pro 76 DSRRALLRGLEGGRT 90 (90) Q Consensus 76 ~sRraLLRgLdg~R~ 90 (90) +---.|-+.|.-+|. T Consensus 78 SrTGNLakalk~~rs 92 (92) T protein:vir:78 78 SRTGNLARSVKRRRS 92 (92) T ss_pred cccchHHHHHhhhcC Confidence 655667788888888 No 7 >protein:vir:99101 Length: 142 # NCBI annotation: gp25 # Family: family:all:1084 # MgeID: mge:1608 # MgeName: Qyrzula # Cross-refs: genbank:acc:YP_655705;genbank:gi:109521783;genbank:GeneID:4157823 Probab=10.33 E-value=4 Score=17.29 Aligned_cols=90 Identities=21% Similarity=0.215 Sum_probs=54.2 Q ss_pred CCCCCccccccchhhHHhhcC--hhHHHHHHHHHHHHHHHHhhhccccccceecccccccc---eecceeecc-----cc Q lcl|Aclame:pro 1 MAREGFQLSTTRRNVAAFLRS--PGVRQAVEASTREIEAAARQAAEPDAGQFRTDITEESN---RVRGAVIGD-----YA 70 (90) Q Consensus 1 mar~~fr~~~nRRniA~FLrs--p~tr~~iE~kTRa~E~AA~aaa~~D~GQFRTDv~~~~~---RvRGAVIGD-----Y~ 70 (90) |+.-+|++.-.-+.+..+-+. ..+++.|++.++..+.-|.+.+.-|-|.-|.-|..... ..-+..+|. |+ T Consensus 1 m~~~~~~~~gl~~~l~~~~~~~~~~~~~~i~~~a~~v~~~Ak~~aPv~tG~Lr~SI~~~~~~~~~~~~~~~~v~~~a~YA 80 (142) T protein:vir:99 1 MVQVSVRYEGFDYNPVGAAAQVGPILRRTHSSLTRQIANETRARVPVLTGHLGRSVREDPQVMVTPFHVSGGVTAHAKYA 80 (142) T ss_pred CceeEEEeeecchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCccchhhhcceeeeeccccccceEEEEeccCcccc Confidence 999999988666666655543 56888999999999999999998899999888764322 222344443 43 Q ss_pred CCChhhHHH-----HHHHhh---hcccC Q lcl|Aclame:pro 71 TADPEDSRR-----ALLRGL---EGGRT 90 (90) Q Consensus 71 t~~pE~sRr-----aLLRgL---dg~R~ 90 (90) ----+-++- +.-++| .+++. T Consensus 81 ~~ve~GT~ph~i~pk~~~al~f~~~g~~ 108 (142) T protein:vir:99 81 AAVHEGTRPHVIRAKHAQALHFWWRGRE 108 (142) T ss_pred ceeccCCccceeccccCceeeEecCCce Confidence 222222221 111111 01111 No 8 >protein:vir:8669 Length: 142 # NCBI annotation: gp27 # Family: family:all:1084 # MgeID: mge:156 # MgeName: Rosebush # Cross-refs: genbank:acc:NP_817788;genbank:gi:29566220;genbank:GeneID:1259476 Probab=10.33 E-value=4 Score=17.29 Aligned_cols=90 Identities=21% Similarity=0.215 Sum_probs=54.2 Q ss_pred CCCCCccccccchhhHHhhcC--hhHHHHHHHHHHHHHHHHhhhccccccceecccccccc---eecceeecc-----cc Q lcl|Aclame:pro 1 MAREGFQLSTTRRNVAAFLRS--PGVRQAVEASTREIEAAARQAAEPDAGQFRTDITEESN---RVRGAVIGD-----YA 70 (90) Q Consensus 1 mar~~fr~~~nRRniA~FLrs--p~tr~~iE~kTRa~E~AA~aaa~~D~GQFRTDv~~~~~---RvRGAVIGD-----Y~ 70 (90) |+.-+|++.-.-+.+..+-+. ..+++.|++.++..+.-|.+.+.-|-|.-|.-|..... ..-+..+|. |+ T Consensus 1 m~~~~~~~~gl~~~l~~~~~~~~~~~~~~i~~~a~~v~~~Ak~~aPv~tG~Lr~SI~~~~~~~~~~~~~~~~v~~~a~YA 80 (142) T protein:vir:86 1 MVQVSVRYEGFDYNPVGAAAQVGPILRRTHSSLTRQIANETRARVPVLTGHLGRSVREDPQVMVTPFHVSGGVTAHAKYA 80 (142) T ss_pred CceeEEEeeecchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCccchhhhcceeeeeccccccceEEEEeccCcccc Confidence 999999988666666655543 56888999999999999999998899999888764322 222344443 43 Q ss_pred CCChhhHHH-----HHHHhh---hcccC Q lcl|Aclame:pro 71 TADPEDSRR-----ALLRGL---EGGRT 90 (90) Q Consensus 71 t~~pE~sRr-----aLLRgL---dg~R~ 90 (90) ----+-++- +.-++| .+++. T Consensus 81 ~~ve~GT~ph~i~pk~~~al~f~~~g~~ 108 (142) T protein:vir:86 81 AAVHEGTRPHVIRAKHAQALHFWWRGRE 108 (142) T ss_pred ceeccCCccceeccccCceeeEecCCce Confidence 222222221 111111 01111 No 9 >protein:vir:106506 Length: 137 # NCBI annotation: Pas21 # Family: family:all:1084 # MgeID: mge:1680 # MgeName: phiAsp2 # Cross-refs: genbank:acc:YP_024807;genbank:gi:48697422;genbank:GeneID:2846163 Probab=6.87 E-value=6.9 Score=15.98 Aligned_cols=87 Identities=24% Similarity=0.243 Sum_probs=48.1 Q ss_pred CCCCCccccccchhhHHhhcChhHHHHHHHHHHHHHHHHhhhccccccceecccccccceecc--eeec-----cccCCC Q lcl|Aclame:pro 1 MAREGFQLSTTRRNVAAFLRSPGVRQAVEASTREIEAAARQAAEPDAGQFRTDITEESNRVRG--AVIG-----DYATAD 73 (90) Q Consensus 1 mar~~fr~~~nRRniA~FLrsp~tr~~iE~kTRa~E~AA~aaa~~D~GQFRTDv~~~~~RvRG--AVIG-----DY~t~~ 73 (90) |---+.+ -||.-+...+ .+..++++++-++..|+.|.+.+-.|.|+-|..|.+..-..+| .+++ +|+-.- T Consensus 1 ~~~~~~~--l~~~~l~~~~-~~~~~~~~~~~a~~ve~~ak~~aPv~TG~Lr~SI~~~~~~~~g~~v~~~V~~~~~YA~~v 77 (137) T protein:vir:10 1 MVAHTLR--IERAQLHGLG-MDEARKAVNRVVRRTFTRSQILAPVDTGYLRASGRLVLGRERGAVVIGSVEYTARYAAAV 77 (137) T ss_pred Ccccccc--cChhhHhhHH-HHHHHHHHHHHHHHHHHHHHhcCCcCchhhhccceeeeeeccccEEEEEecCCcccceee Confidence 4333333 2344444443 5678889999999999999999988999988877665433333 2333 454322 Q ss_pred hhhHH--------HHHHHhhhcccC Q lcl|Aclame:pro 74 PEDSR--------RALLRGLEGGRT 90 (90) Q Consensus 74 pE~sR--------raLLRgLdg~R~ 90 (90) -+-++ ++-|+--.++++ T Consensus 78 e~GT~ph~I~pk~~kaL~f~~~G~~ 102 (137) T protein:vir:10 78 HNGRRALTIRAKGNGRLKFTVEGRT 102 (137) T ss_pred ecCCCCceeecCCCccceeecCCee Confidence 22221 122222222333 No 10 >protein:vir:102441 Length: 137 # NCBI annotation: gp26 # Family: family:all:1084 # MgeID: mge:1618 # MgeName: Pipefish # Cross-refs: genbank:acc:YP_655303;genbank:gi:109521866;genbank:GeneID:4157756 Probab=6.53 E-value=6 Score=16.30 Aligned_cols=88 Identities=22% Similarity=0.263 Sum_probs=54.7 Q ss_pred CCCCccccccchhhHHhhcChhHHHHHHHHHHHHHHHHhhhccccccceecccccc------cceecceee--ccccCCC Q lcl|Aclame:pro 2 AREGFQLSTTRRNVAAFLRSPGVRQAVEASTREIEAAARQAAEPDAGQFRTDITEE------SNRVRGAVI--GDYATAD 73 (90) Q Consensus 2 ar~~fr~~~nRRniA~FLrsp~tr~~iE~kTRa~E~AA~aaa~~D~GQFRTDv~~~------~~RvRGAVI--GDY~t~~ 73 (90) -.-++++.+|.+.++.-+ .+..+..+++.++..+..|.+-+..|-|+.|--|... ...+.+.|. -+|+--- T Consensus 1 ~~~~~~~~~~~~~~~~~~-~~v~r~~l~~~a~~v~~~Ak~~aPv~tG~Lr~SI~~~~~~~~~~~~~~~~V~~~~~YA~~v 79 (137) T protein:vir:10 1 MTVTARYERNPVGEARQF-QVIARRRLSRITRGTANQARADVPVKTGNLGRSIREDPIVVAGPLRLDSGVTAHADYARYV 79 (137) T ss_pred CeeEEEeccCchhHHHHH-HHHHHHHHHHHHHHHHHHHHhcCCccchhhhcCceeeeeeccccceEEEEecCCCccceee Confidence 566777889999888854 4667889999999999999998888999888877543 223344443 2354332 Q ss_pred hhhHHHHHHHhhh---------cccC Q lcl|Aclame:pro 74 PEDSRRALLRGLE---------GGRT 90 (90) Q Consensus 74 pE~sRraLLRgLd---------g~R~ 90 (90) -+-++--.++.-+ +++. T Consensus 80 e~GT~ph~I~Pk~~k~~l~~~~~g~~ 105 (137) T protein:vir:10 80 HDGTRAHVIRPRRPGGVLRFTVGGRV 105 (137) T ss_pred ecCCCCceeeccccceeeeEeeCCee Confidence 2323211122211 1211 Done!