Query lcl|Aclame:protein:vir:106684|NCBI_annot:ORF 276|genbank:acc:NP_944453;genbank:gi:38639802;genbank:GeneID:2658356 Match_columns 277 No_of_seqs 26 out of 41 Neff 2.9 Searched_HMMs 1612 Date Sat Nov 30 22:29:10 2013 Command /home/guerois/workspace/virfam/python/lib/hhsearch//hhsearch2 -i .//seq/seq_5 -d /home/guerois/workspace/virfam/python/profile_database/capsid_neck_tail.hhm -glob -cpu 7 -o .//seq/HHR/seq_5_vs_rec_db.hhr No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM 1 protein:vir:8846 Length: 705 # 97.8 8.9E-06 5.5E-09 48.3 17.0 133 1-137 550-705 (705) 2 protein:vir:8846 Length: 705 # 97.8 1.6E-05 9.9E-09 46.9 18.3 120 1-126 575-705 (705) 3 protein:vir:108295 Length: 711 97.2 0.00012 7.4E-08 42.1 16.1 112 1-124 589-711 (711) 4 protein:vir:108295 Length: 711 96.6 0.00028 1.7E-07 40.1 13.4 107 1-107 593-711 (711) 5 protein:vir:3520 Length: 720 # 94.5 0.0043 2.7E-06 33.5 12.7 143 1-146 553-720 (720) 6 protein:vir:3296 Length: 714 # 87.0 0.042 2.6E-05 28.1 13.6 129 1-130 581-714 (714) 7 protein:vir:817 Length: 714 # 87.0 0.042 2.6E-05 28.1 13.6 129 1-130 581-714 (714) 8 protein:vir:2764 Length: 714 # 87.0 0.042 2.6E-05 28.1 13.6 129 1-130 581-714 (714) 9 protein:vir:10117 Length: 714 87.0 0.042 2.6E-05 28.1 13.6 129 1-130 581-714 (714) 10 protein:vir:9950 Length: 714 # 87.0 0.042 2.6E-05 28.1 13.6 129 1-130 581-714 (714) 11 protein:vir:9950 Length: 714 # 87.0 0.042 2.6E-05 28.1 13.1 113 1-116 585-714 (714) 12 protein:vir:2764 Length: 714 # 87.0 0.042 2.6E-05 28.1 13.1 113 1-116 585-714 (714) 13 protein:vir:10117 Length: 714 87.0 0.042 2.6E-05 28.1 13.1 113 1-116 585-714 (714) 14 protein:vir:817 Length: 714 # 87.0 0.042 2.6E-05 28.1 13.1 113 1-116 585-714 (714) 15 protein:vir:3296 Length: 714 # 87.0 0.042 2.6E-05 28.1 13.1 113 1-116 585-714 (714) 16 protein:vir:9263 Length: 725 # 86.5 0.045 2.8E-05 28.0 17.4 142 1-146 558-725 (725) 17 protein:vir:1084 Length: 437 # 86.3 0.047 2.9E-05 27.9 21.6 215 5-277 1-229 (437) 18 protein:vir:100920 Length: 725 85.9 0.05 3.1E-05 27.7 17.2 146 1-153 558-725 (725) 19 protein:vir:4339 Length: 395 # 84.1 0.063 3.9E-05 27.2 11.9 166 1-277 1-169 (395) 20 protein:vir:77597 Length: 725 82.2 0.079 4.9E-05 26.6 14.8 138 1-146 558-725 (725) 21 protein:vir:9704 Length: 394 # 77.1 0.13 8E-05 25.5 13.9 200 14-277 1-213 (394) 22 protein:vir:100172 Length: 394 75.2 0.15 9.2E-05 25.1 10.0 159 18-277 1-165 (394) 23 protein:vir:3520 Length: 720 # 74.3 0.16 9.9E-05 24.9 12.3 118 1-129 587-720 (720) 24 protein:vir:9263 Length: 725 # 74.3 0.16 9.9E-05 24.9 12.6 124 1-127 581-725 (725) 25 protein:vir:105520 Length: 706 69.9 0.22 0.00013 24.2 11.3 135 1-151 569-706 (706) 26 protein:vir:104437 Length: 714 67.7 0.25 0.00015 23.9 13.9 127 1-130 581-714 (714) 27 protein:vir:3870 Length: 400 # 59.1 0.4 0.00025 22.8 15.2 200 5-277 1-219 (400) 28 protein:vir:1084 Length: 437 # 56.7 0.45 0.00028 22.5 20.1 227 1-277 1-240 (437) 29 protein:vir:962 Length: 397 # 55.6 0.48 0.0003 22.3 17.3 201 1-277 1-216 (397) 30 protein:vir:95376 Length: 425 53.5 0.53 0.00033 22.1 13.6 185 5-277 1-190 (425) 31 protein:vir:81160 Length: 371 53.0 0.54 0.00033 22.1 8.5 143 1-277 1-146 (371) 32 protein:vir:100884 Length: 389 48.1 0.68 0.00042 21.5 9.9 164 21-277 1-183 (389) 33 protein:vir:104437 Length: 714 48.1 0.68 0.00042 21.5 12.8 111 1-116 585-714 (714) 34 protein:vir:4953 Length: 397 # 48.0 0.68 0.00042 21.5 11.8 164 18-277 1-185 (397) 35 protein:vir:93881 Length: 387 47.9 0.69 0.00043 21.5 13.1 237 18-277 1-315 (387) 36 protein:vir:9704 Length: 394 # 44.7 0.8 0.00049 21.1 10.7 179 48-277 1-181 (394) 37 protein:vir:1886 Length: 385 # 43.9 0.83 0.00051 21.0 13.0 180 18-277 1-188 (385) 38 protein:vir:191 Length: 385 # 43.9 0.83 0.00051 21.0 13.0 180 18-277 1-188 (385) 39 protein:vir:105520 Length: 706 43.8 0.83 0.00052 21.0 9.4 116 1-131 573-706 (706) 40 protein:vir:172 Length: 708 # 43.1 0.86 0.00053 21.0 13.3 136 1-155 570-708 (708) 41 protein:vir:100920 Length: 725 42.2 0.89 0.00055 20.9 16.8 134 1-146 562-725 (725) 42 protein:vir:3845 Length: 395 # 41.6 0.92 0.00057 20.8 12.0 159 19-277 1-165 (395) 43 protein:vir:95376 Length: 425 41.4 0.93 0.00058 20.8 14.3 204 1-277 1-221 (425) 44 protein:vir:77597 Length: 725 36.3 1.2 0.00073 20.2 14.3 125 1-127 581-725 (725) 45 protein:vir:4830 Length: 397 # 35.5 1.2 0.00076 20.1 12.2 184 1-277 1-196 (397) 46 protein:vir:104256 Length: 458 31.9 1.5 0.00091 19.7 19.4 250 1-277 1-341 (458) 47 protein:vir:95821 Length: 763 31.4 1.5 0.00093 19.6 13.7 167 1-168 562-763 (763) 48 protein:vir:100135 Length: 418 29.6 1.6 0.001 19.4 13.4 186 18-277 1-207 (418) 49 protein:vir:105429 Length: 708 29.4 1.7 0.001 19.4 14.6 133 1-155 570-708 (708) 50 protein:vir:7409 Length: 408 # 26.7 1.9 0.0012 19.0 11.0 170 1-277 1-192 (408) 51 protein:vir:172 Length: 708 # 24.9 2.1 0.0013 18.8 11.5 116 1-131 574-708 (708) 52 protein:vir:80128 Length: 466 21.0 2.7 0.0017 18.2 18.3 197 1-277 1-220 (466) No 1 >protein:vir:8846 Length: 705 # NCBI annotation: putative portal protein # Family: family:all:1548 # MgeID: mge:158 # MgeName: PaP3 # Cross-refs: genbank:acc:NP_775254;genbank:gi:27476052;genbank:GeneID:2700600 Probab=97.82 E-value=8.9e-06 Score=48.27 Aligned_cols=133 Identities=19% Similarity=0.189 Sum_probs=29.7 Q ss_pred CCchhHHHHHHHHHHH------------HhhhHH----HHHHHHHHHHHHHHHHHHH---H--HHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 1 MSTDGKLVSVYEEKIR------------NAKSLE----ELKQVWDEVQLQVADHKTQ---K--RLWKAKEKREFELKYQE 59 (277) Q Consensus 1 mstd~KL~avyEEe~k------------ka~kle----ELkQK~EEaeKQiad~k~e---k--K~E~ErQKaEiE~QRaE 59 (277) |.+...+.....+... ....++ ++.+...+.+.+..+++.+ + ..|.+++.+|++.+.+| T Consensus 550 ~~~~~~~~~~~~el~e~~~~k~~~~~~~~~~~~e~~~~~~~~~q~e~~~~~~~~~~q~e~~k~q~e~~~~q~e~q~~q~E 629 (705) T protein:vir:88 550 LVSEQNLYNILKEVTENAGYKDPDRFWTNPNSPEALQAKAIREQKEAQPKPEDIKAQADAQRAQSDALAKQAEAQMKQVE 629 (705) T ss_pred hcChHHHHHHHHHHHHhhhhhhHHHHhhhhhhHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Confidence 1111111111100000 000011 1111111111111111000 1 11222222333333333 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHH--HHHHHHHHHHHcCeeeeeecccee Q lcl|Aclame:pro 60 FEKLKAELSQKKKKVKKERVDVKVKITKKWINSRLFTAEHYIAMLQQSKDGLQL--LFLRRAKLVENQGYLMLEVKKMKK 137 (277) Q Consensus 60 iEkqKAEiErqKkEiEkqkaEiE~k~qKkEiEsQkaEAErqkAElErqR~EIEl--L~L~~a~L~Eq~g~L~L~~kkgkK 137 (277) .+...+|++.++++...++.+.+.+..+.+.+.+.++.++..++.+++.++.+. ...+..++.+.+. -.+..++ T Consensus 630 ~q~~q~e~e~~~~~~~~~~~e~~~~~a~~~~~~~~~e~e~~~~e~e~~~e~~q~~~~~~~~~~~~~~~k----~~~~~rr 705 (705) T protein:vir:88 630 AQIRLAEIELKKQEAVLQQREMALKEAELQLERDRFTWERARNEAEYHLEATQARAAYIGDGKVPETKK----PTKAVRR 705 (705) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHH----HHHHhcC Confidence 333334444333333322222222111111122222333333333222211111 1111122222222 1122223 No 2 >protein:vir:8846 Length: 705 # NCBI annotation: putative portal protein # Family: family:all:1548 # MgeID: mge:158 # MgeName: PaP3 # Cross-refs: genbank:acc:NP_775254;genbank:gi:27476052;genbank:GeneID:2700600 Probab=97.82 E-value=1.6e-05 Score=46.87 Aligned_cols=120 Identities=19% Similarity=0.149 Sum_probs=29.6 Q ss_pred CCch-hHHHHHHHHHHHHhhhH----HHHHHHHHHHHHHHH----HHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 1 MSTD-GKLVSVYEEKIRNAKSL----EELKQVWDEVQLQVA----DHKTQ-KRLWKAKEKREFELKYQEFEKLKAELSQK 70 (277) Q Consensus 1 mstd-~KL~avyEEe~kka~kl----eELkQK~EEaeKQia----d~k~e-kK~E~ErQKaEiE~QRaEiEkqKAEiErq 70 (277) +.+| ..+.....++.....+. ++++.+.+..+.|.. .++.+ +..|.+.+.+|+|.++++...+..|.+.+ T Consensus 575 ~~~~~~~~e~~~~~~~~~q~e~~~~~~~~~~q~e~~k~q~e~~~~q~e~q~~q~E~q~~q~e~e~~~~~~~~~~~e~~~~ 654 (705) T protein:vir:88 575 FWTNPNSPEALQAKAIREQKEAQPKPEDIKAQADAQRAQSDALAKQAEAQMKQVEAQIRLAEIELKKQEAVLQQREMALK 654 (705) T ss_pred HhhhhhhHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Confidence 0111 01111111111111111 111111111111111 00111 11222223334444444433333344444 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhH-HHHHHHHHHHHHHHHHcC Q lcl|Aclame:pro 71 KKKVKKERVDVKVKITKKWINSRLFTAEHYIAMLQQSK-DGLQLLFLRRAKLVENQG 126 (277) Q Consensus 71 KkEiEkqkaEiE~k~qKkEiEsQkaEAErqkAElErqR-~EIElL~L~~a~L~Eq~g 126 (277) +++.+.++.+.+.++...+.+.++++......+.+..+ ++-+ .-..+.+- T Consensus 655 ~a~~~~~~~~~e~e~~~~e~e~~~e~~q~~~~~~~~~~~~~~~------k~~~~~rr 705 (705) T protein:vir:88 655 EAELQLERDRFTWERARNEAEYHLEATQARAAYIGDGKVPETK------KPTKAVRR 705 (705) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHH------HHHHHhcC Confidence 44444444444433333333333222211111111111 1111 11122222 No 3 >protein:vir:108295 Length: 711 # NCBI annotation: hypothetical protein # Family: family:all:487 # MgeID: mge:2007 # MgeName: BA3 # Cross-refs: genbank:acc:YP_001552284;genbank:gi:160700609;genbank:GeneID:5758811 Probab=97.22 E-value=0.00012 Score=42.10 Aligned_cols=112 Identities=11% Similarity=0.056 Sum_probs=26.4 Q ss_pred CCchhHHHHHHHHHHHHhhhHHH--------HHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 1 MSTDGKLVSVYEEKIRNAKSLEE--------LKQVWDEVQLQVADHK-TQKRLWKAKEKREFELKYQEFEKLKAELSQKK 71 (277) Q Consensus 1 mstd~KL~avyEEe~kka~kleE--------LkQK~EEaeKQiad~k-~ekK~E~ErQKaEiE~QRaEiEkqKAEiErqK 71 (277) -..|+.-+..+-+..++...... .++...+.+.+..+.+ .+++......+++++.++++++..+++.+... T Consensus 589 ~~~d~p~~~el~e~lr~~~~~~~~~~~~~~~~qq~~~e~qq~~~~~q~~~~~~q~~~~qa~ae~~~Aqae~~qa~~e~~~ 668 (711) T protein:vir:10 589 QNMDWPGADVIAERLKKIVPPNVLSKDEREAIEEDMPEQTEPTPEQQVEMAKSQADMAQAEADTAQAQADMLKAQLETEE 668 (711) T ss_pred HhcCCCCHHHHHHHHHhhcCcccCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Confidence 11222223333333332222110 0011111111111101 00111112222233333333332222221111 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHhhHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 72 KKVKKERVDVKVKITKKWINSRLFTAE--HYIAMLQQSKDGLQLLFLRRAKLVEN 124 (277) Q Consensus 72 kEiEkqkaEiE~k~qKkEiEsQkaEAE--rqkAElErqR~EIElL~L~~a~L~Eq 124 (277) .. ..+.. .+...+.+.++ ...++++...++++.++ .++.+| T Consensus 669 ~q-------~q~~~--~~~~aq~~~~~~qq~~~~l~~~qaelq~~q---~~~~q~ 711 (711) T protein:vir:10 669 AQ-------KQLAM--IEDMAQGGDVVYQQVRELVAQALAEITASQ---ANVTEQ 711 (711) T ss_pred HH-------HHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHhhcC Confidence 11 11000 00001111111 11222333334444443 444444 No 4 >protein:vir:108295 Length: 711 # NCBI annotation: hypothetical protein # Family: family:all:487 # MgeID: mge:2007 # MgeName: BA3 # Cross-refs: genbank:acc:YP_001552284;genbank:gi:160700609;genbank:GeneID:5758811 Probab=96.60 E-value=0.00028 Score=40.08 Aligned_cols=107 Identities=10% Similarity=0.068 Sum_probs=28.5 Q ss_pred CCchhHHHHHH-----------HHHHHHhhhHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 1 MSTDGKLVSVY-----------EEKIRNAKSLEELKQVWDEVQLQVADHKTQ-KRLWKAKEKREFELKYQEFEKLKAELS 68 (277) Q Consensus 1 mstd~KL~avy-----------EEe~kka~kleELkQK~EEaeKQiad~k~e-kK~E~ErQKaEiE~QRaEiEkqKAEiE 68 (277) +---++|.+.. ++.....+..++.+++..+.+.+.++++.. .+++.+..+++.+.-+++.+..++... T Consensus 593 ~p~~~el~e~lr~~~~~~~~~~~~~~~~qq~~~e~qq~~~~~q~~~~~~q~~~~qa~ae~~~Aqae~~qa~~e~~~~q~q 672 (711) T protein:vir:10 593 WPGADVIAERLKKIVPPNVLSKDEREAIEEDMPEQTEPTPEQQVEMAKSQADMAQAEADTAQAQADMLKAQLETEEAQKQ 672 (711) T ss_pred CCCHHHHHHHHHhhcCcccCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Confidence 11111111111 011111111112222222222111111111 123333333333332222222222111 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh Q lcl|Aclame:pro 69 QKKKKVKKERVDVKVKITKKWINSRLFTAEHYIAMLQQS 107 (277) Q Consensus 69 rqKkEiEkqkaEiE~k~qKkEiEsQkaEAErqkAElErq 107 (277) ....+...+.++...+..+.+....++++...++++++| T Consensus 673 ~~~~~~~aq~~~~~~qq~~~~l~~~qaelq~~q~~~~q~ 711 (711) T protein:vir:10 673 LAMIEDMAQGGDVVYQQVRELVAQALAEITASQANVTEQ 711 (711) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC Confidence 111222222223333333333444444444444444444 No 5 >protein:vir:3520 Length: 720 # NCBI annotation: P19 # Family: family:all:487 # MgeID: mge:72 # MgeName: APSE-1 # Cross-refs: genbank:acc:NP_050980;genbank:gi:9633566;genbank:GeneID:1262313 Probab=94.47 E-value=0.0043 Score=33.54 Aligned_cols=143 Identities=14% Similarity=0.027 Sum_probs=26.0 Q ss_pred CCc----------------hhHHHHHHHHHHHHhhh-HHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 1 MST----------------DGKLVSVYEEKIRNAKS-LEELKQVWDEVQLQVADHKTQ-KRLWKAKEKREFELKYQEFEK 62 (277) Q Consensus 1 mst----------------d~KL~avyEEe~kka~k-leELkQK~EEaeKQiad~k~e-kK~E~ErQKaEiE~QRaEiEk 62 (277) |.+ |..-....-|..++... ....++...+.+..+++++.+ ++.-.+.++++.+.++++.+. T Consensus 553 ~~p~~~~~~~~~~~ile~~d~p~~~e~~erirk~~~~~~~~~~~~~e~qq~~a~~qq~~qq~~~e~~~aqa~l~qaqae~ 632 (720) T protein:vir:35 553 MLPQDPMRQVLQGIILDNMEGEGLDEFKEYNRKQLLTQGVVKPRNTEEEQMVAQMIQQAQQPNAELVAAQGVLMQGQAEV 632 (720) T ss_pred cCCCchhHHHHHHHHHHhcCchhHHHHHHHHHhhcchhcccCccChhHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHH Confidence 211 11111111122221110 011111111222222211111 111111222222222222222 Q ss_pred HHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHcCeeeeeeccceee Q lcl|Aclame:pro 63 LKAELSQKKKKVKKERVDV----KVKITKKWINSRLFTAEHYIAMLQQSKDGLQLLFLRRAKLVENQGYLMLEVKKMKKV 138 (277) Q Consensus 63 qKAEiErqKkEiEkqkaEi----E~k~qKkEiEsQkaEAErqkAElErqR~EIElL~L~~a~L~Eq~g~L~L~~kkgkK~ 138 (277) .+++.+....+++..+++. +..++..++.++.. ++++++.+....++-+..+...-+....-|.+|-.-+.++ T Consensus 633 ~kaqa~~~~~qa~a~~aqa~a~~~~a~~~~~~aq~~~---~~q~~i~qalq~~~~~q~~q~~~eqa~~el~~~~~~~~~~ 709 (720) T protein:vir:35 633 QKAKNEELAIQVKAFQAQTEARVAEAKMVQILASADS---AKRAEIREALKMLHQFQKEQGDASRADAELILKATDTQHK 709 (720) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHhcchHHHHHHHHhhcccchhhh Confidence 2222222222222211111 11111111111100 0111111111111111111111112222222222111111 Q ss_pred E---EEcCcce Q lcl|Aclame:pro 139 W---VLNGEPL 146 (277) Q Consensus 139 ~---vl~~~pl 146 (277) + ++..-.+ T Consensus 710 ~~~~~~~~~~~ 720 (720) T protein:vir:35 710 QNRDAAKNHSI 720 (720) T ss_pred hhHHHhhccCC Confidence 1 1111111 No 6 >protein:vir:3296 Length: 714 # NCBI annotation: putative portal protein # Family: family:all:487 # MgeID: mge:66 # MgeName: 933W # Cross-refs: genbank:acc:NP_049512;genbank:gi:9632518;genbank:GeneID:1262005 Probab=86.99 E-value=0.042 Score=28.15 Aligned_cols=129 Identities=13% Similarity=0.028 Sum_probs=22.9 Q ss_pred CCchhHHHHHHHHHHHHhhhH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 1 MSTDGKLVSVYEEKIRNAKSL----EELKQVWDEVQLQVADHKTQKRLWKAKEKREFELKYQEFEKLKAELSQKKKKVKK 76 (277) Q Consensus 1 mstd~KL~avyEEe~kka~kl----eELkQK~EEaeKQiad~k~ekK~E~ErQKaEiE~QRaEiEkqKAEiErqKkEiEk 76 (277) ...|...+...-+.+++..-. .++.......+.+...+ .++..+.+.++++.+.++.+++..+++...++...+. T Consensus 581 ~~~d~p~~~el~~~ir~~~~~~~~~~~~~~e~q~~~~~~q~~-~~~q~~lq~~~~~a~~~k~eae~~~a~a~a~~~~~~a 659 (714) T protein:vir:32 581 NLLDVPQKQEFVERIRAALGTPKSPDEMTPEEQEVAAQQQAL-QQQQAELQMREMAGRVAKLEADAARAHAAAQRDNASA 659 (714) T ss_pred HhcCCCCHHHHHHHHHHHcCCCCCccccchhhHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Confidence 122322233333333332110 00000000000000000 0011111111222222222222222111111111111 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHcC-eeee Q lcl|Aclame:pro 77 ERVDVKVKITKKWINSRLFTAEHYIAMLQQSKDGLQLLFLRRAKLVENQG-YLML 130 (277) Q Consensus 77 qkaEiE~k~qKkEiEsQkaEAErqkAElErqR~EIElL~L~~a~L~Eq~g-~L~L 130 (277) ++.....+.++.---..++++-.+...++....+-+.++-+..+..+++. -|-| T Consensus 660 ~~~~~~~~~~~~~~~~~~a~~a~~~~~~~~~~~~~~~~~~q~~q~~~~~~~~~~~ 714 (714) T protein:vir:32 660 QREVALTQGQRYVDALNQAHTAEIITGVQNMEQEQDVLQQQMLYTLQQRMNEMSL 714 (714) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhhhhhHHHHHHHHHHHHHHHHhcCC Confidence 11000000000000001111111111111111222222222222222211 1111 No 7 >protein:vir:817 Length: 714 # NCBI annotation: hypothetical protein # Family: family:all:487 # MgeID: mge:16 # MgeName: VT2-Sa # Cross-refs: genbank:acc:NP_050550;genbank:gi:9633447;genbank:GeneID:1262279 Probab=86.99 E-value=0.042 Score=28.15 Aligned_cols=129 Identities=13% Similarity=0.028 Sum_probs=22.9 Q ss_pred CCchhHHHHHHHHHHHHhhhH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 1 MSTDGKLVSVYEEKIRNAKSL----EELKQVWDEVQLQVADHKTQKRLWKAKEKREFELKYQEFEKLKAELSQKKKKVKK 76 (277) Q Consensus 1 mstd~KL~avyEEe~kka~kl----eELkQK~EEaeKQiad~k~ekK~E~ErQKaEiE~QRaEiEkqKAEiErqKkEiEk 76 (277) ...|...+...-+.+++..-. .++.......+.+...+ .++..+.+.++++.+.++.+++..+++...++...+. T Consensus 581 ~~~d~p~~~el~~~ir~~~~~~~~~~~~~~e~q~~~~~~q~~-~~~q~~lq~~~~~a~~~k~eae~~~a~a~a~~~~~~a 659 (714) T protein:vir:81 581 NLLDVPQKQEFVERIRAALGTPKSPDEMTPEEQEVAAQQQAL-QQQQAELQMREMAGRVAKLEADAARAHAAAQRDNASA 659 (714) T ss_pred HhcCCCCHHHHHHHHHHHcCCCCCccccchhhHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Confidence 122322233333333332110 00000000000000000 0011111111222222222222222111111111111 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHcC-eeee Q lcl|Aclame:pro 77 ERVDVKVKITKKWINSRLFTAEHYIAMLQQSKDGLQLLFLRRAKLVENQG-YLML 130 (277) Q Consensus 77 qkaEiE~k~qKkEiEsQkaEAErqkAElErqR~EIElL~L~~a~L~Eq~g-~L~L 130 (277) ++.....+.++.---..++++-.+...++....+-+.++-+..+..+++. -|-| T Consensus 660 ~~~~~~~~~~~~~~~~~~a~~a~~~~~~~~~~~~~~~~~~q~~q~~~~~~~~~~~ 714 (714) T protein:vir:81 660 QREVALTQGQRYVDALNQAHTAEIITGVQNMEQEQDVLQQQMLYTLQQRMNEMSL 714 (714) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhhhhhHHHHHHHHHHHHHHHHhcCC Confidence 11000000000000001111111111111111222222222222222211 1111 No 8 >protein:vir:2764 Length: 714 # NCBI annotation: hypothetical protein # Family: family:all:487 # MgeID: mge:59 # MgeName: Stx2 converting bacteriophage I # Cross-refs: genbank:acc:NP_612881;genbank:gi:20065798;genbank:GeneID:935623 Probab=86.99 E-value=0.042 Score=28.15 Aligned_cols=129 Identities=13% Similarity=0.028 Sum_probs=22.9 Q ss_pred CCchhHHHHHHHHHHHHhhhH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 1 MSTDGKLVSVYEEKIRNAKSL----EELKQVWDEVQLQVADHKTQKRLWKAKEKREFELKYQEFEKLKAELSQKKKKVKK 76 (277) Q Consensus 1 mstd~KL~avyEEe~kka~kl----eELkQK~EEaeKQiad~k~ekK~E~ErQKaEiE~QRaEiEkqKAEiErqKkEiEk 76 (277) ...|...+...-+.+++..-. .++.......+.+...+ .++..+.+.++++.+.++.+++..+++...++...+. T Consensus 581 ~~~d~p~~~el~~~ir~~~~~~~~~~~~~~e~q~~~~~~q~~-~~~q~~lq~~~~~a~~~k~eae~~~a~a~a~~~~~~a 659 (714) T protein:vir:27 581 NLLDVPQKQEFVERIRAALGTPKSPDEMTPEEQEVAAQQQAL-QQQQAELQMREMAGRVAKLEADAARAHAAAQRDNASA 659 (714) T ss_pred HhcCCCCHHHHHHHHHHHcCCCCCccccchhhHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Confidence 122322233333333332110 00000000000000000 0011111111222222222222222111111111111 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHcC-eeee Q lcl|Aclame:pro 77 ERVDVKVKITKKWINSRLFTAEHYIAMLQQSKDGLQLLFLRRAKLVENQG-YLML 130 (277) Q Consensus 77 qkaEiE~k~qKkEiEsQkaEAErqkAElErqR~EIElL~L~~a~L~Eq~g-~L~L 130 (277) ++.....+.++.---..++++-.+...++....+-+.++-+..+..+++. -|-| T Consensus 660 ~~~~~~~~~~~~~~~~~~a~~a~~~~~~~~~~~~~~~~~~q~~q~~~~~~~~~~~ 714 (714) T protein:vir:27 660 QREVALTQGQRYVDALNQAHTAEIITGVQNMEQEQDVLQQQMLYTLQQRMNEMSL 714 (714) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhhhhhHHHHHHHHHHHHHHHHhcCC Confidence 11000000000000001111111111111111222222222222222211 1111 No 9 >protein:vir:10117 Length: 714 # NCBI annotation: hypothetical protein # Family: family:all:487 # MgeID: mge:180 # MgeName: Stx2 converting bacteriophage II # Cross-refs: genbank:acc:NP_859247;genbank:gi:32171003;genbank:GeneID:2653343 Probab=86.99 E-value=0.042 Score=28.15 Aligned_cols=129 Identities=13% Similarity=0.028 Sum_probs=22.9 Q ss_pred CCchhHHHHHHHHHHHHhhhH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 1 MSTDGKLVSVYEEKIRNAKSL----EELKQVWDEVQLQVADHKTQKRLWKAKEKREFELKYQEFEKLKAELSQKKKKVKK 76 (277) Q Consensus 1 mstd~KL~avyEEe~kka~kl----eELkQK~EEaeKQiad~k~ekK~E~ErQKaEiE~QRaEiEkqKAEiErqKkEiEk 76 (277) ...|...+...-+.+++..-. .++.......+.+...+ .++..+.+.++++.+.++.+++..+++...++...+. T Consensus 581 ~~~d~p~~~el~~~ir~~~~~~~~~~~~~~e~q~~~~~~q~~-~~~q~~lq~~~~~a~~~k~eae~~~a~a~a~~~~~~a 659 (714) T protein:vir:10 581 NLLDVPQKQEFVERIRAALGTPKSPDEMTPEEQEVAAQQQAL-QQQQAELQMREMAGRVAKLEADAARAHAAAQRDNASA 659 (714) T ss_pred HhcCCCCHHHHHHHHHHHcCCCCCccccchhhHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Confidence 122322233333333332110 00000000000000000 0011111111222222222222222111111111111 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHcC-eeee Q lcl|Aclame:pro 77 ERVDVKVKITKKWINSRLFTAEHYIAMLQQSKDGLQLLFLRRAKLVENQG-YLML 130 (277) Q Consensus 77 qkaEiE~k~qKkEiEsQkaEAErqkAElErqR~EIElL~L~~a~L~Eq~g-~L~L 130 (277) ++.....+.++.---..++++-.+...++....+-+.++-+..+..+++. -|-| T Consensus 660 ~~~~~~~~~~~~~~~~~~a~~a~~~~~~~~~~~~~~~~~~q~~q~~~~~~~~~~~ 714 (714) T protein:vir:10 660 QREVALTQGQRYVDALNQAHTAEIITGVQNMEQEQDVLQQQMLYTLQQRMNEMSL 714 (714) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhhhhhHHHHHHHHHHHHHHHHhcCC Confidence 11000000000000001111111111111111222222222222222211 1111 No 10 >protein:vir:9950 Length: 714 # NCBI annotation: hypothetical protein # Family: family:all:487 # MgeID: mge:179 # MgeName: Stx1 converting bacteriophage # Cross-refs: genbank:acc:NP_859080;genbank:gi:32170835;genbank:GeneID:2653184 Probab=86.99 E-value=0.042 Score=28.15 Aligned_cols=129 Identities=13% Similarity=0.028 Sum_probs=22.9 Q ss_pred CCchhHHHHHHHHHHHHhhhH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 1 MSTDGKLVSVYEEKIRNAKSL----EELKQVWDEVQLQVADHKTQKRLWKAKEKREFELKYQEFEKLKAELSQKKKKVKK 76 (277) Q Consensus 1 mstd~KL~avyEEe~kka~kl----eELkQK~EEaeKQiad~k~ekK~E~ErQKaEiE~QRaEiEkqKAEiErqKkEiEk 76 (277) ...|...+...-+.+++..-. .++.......+.+...+ .++..+.+.++++.+.++.+++..+++...++...+. T Consensus 581 ~~~d~p~~~el~~~ir~~~~~~~~~~~~~~e~q~~~~~~q~~-~~~q~~lq~~~~~a~~~k~eae~~~a~a~a~~~~~~a 659 (714) T protein:vir:99 581 NLLDVPQKQEFVERIRAALGTPKSPDEMTPEEQEVAAQQQAL-QQQQAELQMREMAGRVAKLEADAARAHAAAQRDNASA 659 (714) T ss_pred HhcCCCCHHHHHHHHHHHcCCCCCccccchhhHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Confidence 122322233333333332110 00000000000000000 0011111111222222222222222111111111111 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHcC-eeee Q lcl|Aclame:pro 77 ERVDVKVKITKKWINSRLFTAEHYIAMLQQSKDGLQLLFLRRAKLVENQG-YLML 130 (277) Q Consensus 77 qkaEiE~k~qKkEiEsQkaEAErqkAElErqR~EIElL~L~~a~L~Eq~g-~L~L 130 (277) ++.....+.++.---..++++-.+...++....+-+.++-+..+..+++. -|-| T Consensus 660 ~~~~~~~~~~~~~~~~~~a~~a~~~~~~~~~~~~~~~~~~q~~q~~~~~~~~~~~ 714 (714) T protein:vir:99 660 QREVALTQGQRYVDALNQAHTAEIITGVQNMEQEQDVLQQQMLYTLQQRMNEMSL 714 (714) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhhhhhHHHHHHHHHHHHHHHHhcCC Confidence 11000000000000001111111111111111222222222222222211 1111 No 11 >protein:vir:9950 Length: 714 # NCBI annotation: hypothetical protein # Family: family:all:487 # MgeID: mge:179 # MgeName: Stx1 converting bacteriophage # Cross-refs: genbank:acc:NP_859080;genbank:gi:32170835;genbank:GeneID:2653184 Probab=86.95 E-value=0.042 Score=28.13 Aligned_cols=113 Identities=9% Similarity=0.042 Sum_probs=21.7 Q ss_pred CCchhHHHHHH--------------HHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHH Q lcl|Aclame:pro 1 MSTDGKLVSVY--------------EEKIRNAKSLEELKQVWDEVQLQVADHKTQKRLWKAKEKREFELKYQ--EFEKLK 64 (277) Q Consensus 1 mstd~KL~avy--------------EEe~kka~kleELkQK~EEaeKQiad~k~ekK~E~ErQKaEiE~QRa--EiEkqK 64 (277) +.--.+|.+.. .|+...++...+++++..+++.+...++. ++.+.+-++++...++. +..... T Consensus 585 ~p~~~el~~~ir~~~~~~~~~~~~~~e~q~~~~~~q~~~~~q~~lq~~~~~a~~-~k~eae~~~a~a~a~~~~~~a~~~~ 663 (714) T protein:vir:99 585 VPQKQEFVERIRAALGTPKSPDEMTPEEQEVAAQQQALQQQQAELQMREMAGRV-AKLEADAARAHAAAQRDNASAQREV 663 (714) T ss_pred CCCHHHHHHHHHHHcCCCCCccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHH Confidence 11111111111 11111111222222222222222111111 22222222222211111 111122 Q ss_pred HHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHH Q lcl|Aclame:pro 65 AELSQKKKKVKKERVDVK-VKITKKWINSRLFTAEHYIAMLQQSKDGLQLLFL 116 (277) Q Consensus 65 AEiErqKkEiEkqkaEiE-~k~qKkEiEsQkaEAErqkAElErqR~EIElL~L 116 (277) +..+.++......++++- ......-.+..-+-..++..+. ..+.++.|-| T Consensus 664 ~~~~~~~~~~~~~~a~~a~~~~~~~~~~~~~~~~~~q~~q~--~~~~~~~~~~ 714 (714) T protein:vir:99 664 ALTQGQRYVDALNQAHTAEIITGVQNMEQEQDVLQQQMLYT--LQQRMNEMSL 714 (714) T ss_pred HHHHHHHHHHHHHHHHHHHHHHhHhhhhhhhHHHHHHHHHH--HHHHHHhcCC Confidence 222222222111111110 0000011111111111222222 1122222222 No 12 >protein:vir:2764 Length: 714 # NCBI annotation: hypothetical protein # Family: family:all:487 # MgeID: mge:59 # MgeName: Stx2 converting bacteriophage I # Cross-refs: genbank:acc:NP_612881;genbank:gi:20065798;genbank:GeneID:935623 Probab=86.95 E-value=0.042 Score=28.13 Aligned_cols=113 Identities=9% Similarity=0.042 Sum_probs=21.7 Q ss_pred CCchhHHHHHH--------------HHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHH Q lcl|Aclame:pro 1 MSTDGKLVSVY--------------EEKIRNAKSLEELKQVWDEVQLQVADHKTQKRLWKAKEKREFELKYQ--EFEKLK 64 (277) Q Consensus 1 mstd~KL~avy--------------EEe~kka~kleELkQK~EEaeKQiad~k~ekK~E~ErQKaEiE~QRa--EiEkqK 64 (277) +.--.+|.+.. .|+...++...+++++..+++.+...++. ++.+.+-++++...++. +..... T Consensus 585 ~p~~~el~~~ir~~~~~~~~~~~~~~e~q~~~~~~q~~~~~q~~lq~~~~~a~~-~k~eae~~~a~a~a~~~~~~a~~~~ 663 (714) T protein:vir:27 585 VPQKQEFVERIRAALGTPKSPDEMTPEEQEVAAQQQALQQQQAELQMREMAGRV-AKLEADAARAHAAAQRDNASAQREV 663 (714) T ss_pred CCCHHHHHHHHHHHcCCCCCccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHH Confidence 11111111111 11111111222222222222222111111 22222222222211111 111122 Q ss_pred HHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHH Q lcl|Aclame:pro 65 AELSQKKKKVKKERVDVK-VKITKKWINSRLFTAEHYIAMLQQSKDGLQLLFL 116 (277) Q Consensus 65 AEiErqKkEiEkqkaEiE-~k~qKkEiEsQkaEAErqkAElErqR~EIElL~L 116 (277) +..+.++......++++- ......-.+..-+-..++..+. ..+.++.|-| T Consensus 664 ~~~~~~~~~~~~~~a~~a~~~~~~~~~~~~~~~~~~q~~q~--~~~~~~~~~~ 714 (714) T protein:vir:27 664 ALTQGQRYVDALNQAHTAEIITGVQNMEQEQDVLQQQMLYT--LQQRMNEMSL 714 (714) T ss_pred HHHHHHHHHHHHHHHHHHHHHHhHhhhhhhhHHHHHHHHHH--HHHHHHhcCC Confidence 222222222111111110 0000011111111111222222 1122222222 No 13 >protein:vir:10117 Length: 714 # NCBI annotation: hypothetical protein # Family: family:all:487 # MgeID: mge:180 # MgeName: Stx2 converting bacteriophage II # Cross-refs: genbank:acc:NP_859247;genbank:gi:32171003;genbank:GeneID:2653343 Probab=86.95 E-value=0.042 Score=28.13 Aligned_cols=113 Identities=9% Similarity=0.042 Sum_probs=21.7 Q ss_pred CCchhHHHHHH--------------HHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHH Q lcl|Aclame:pro 1 MSTDGKLVSVY--------------EEKIRNAKSLEELKQVWDEVQLQVADHKTQKRLWKAKEKREFELKYQ--EFEKLK 64 (277) Q Consensus 1 mstd~KL~avy--------------EEe~kka~kleELkQK~EEaeKQiad~k~ekK~E~ErQKaEiE~QRa--EiEkqK 64 (277) +.--.+|.+.. .|+...++...+++++..+++.+...++. ++.+.+-++++...++. +..... T Consensus 585 ~p~~~el~~~ir~~~~~~~~~~~~~~e~q~~~~~~q~~~~~q~~lq~~~~~a~~-~k~eae~~~a~a~a~~~~~~a~~~~ 663 (714) T protein:vir:10 585 VPQKQEFVERIRAALGTPKSPDEMTPEEQEVAAQQQALQQQQAELQMREMAGRV-AKLEADAARAHAAAQRDNASAQREV 663 (714) T ss_pred CCCHHHHHHHHHHHcCCCCCccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHH Confidence 11111111111 11111111222222222222222111111 22222222222211111 111122 Q ss_pred HHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHH Q lcl|Aclame:pro 65 AELSQKKKKVKKERVDVK-VKITKKWINSRLFTAEHYIAMLQQSKDGLQLLFL 116 (277) Q Consensus 65 AEiErqKkEiEkqkaEiE-~k~qKkEiEsQkaEAErqkAElErqR~EIElL~L 116 (277) +..+.++......++++- ......-.+..-+-..++..+. ..+.++.|-| T Consensus 664 ~~~~~~~~~~~~~~a~~a~~~~~~~~~~~~~~~~~~q~~q~--~~~~~~~~~~ 714 (714) T protein:vir:10 664 ALTQGQRYVDALNQAHTAEIITGVQNMEQEQDVLQQQMLYT--LQQRMNEMSL 714 (714) T ss_pred HHHHHHHHHHHHHHHHHHHHHHhHhhhhhhhHHHHHHHHHH--HHHHHHhcCC Confidence 222222222111111110 0000011111111111222222 1122222222 No 14 >protein:vir:817 Length: 714 # NCBI annotation: hypothetical protein # Family: family:all:487 # MgeID: mge:16 # MgeName: VT2-Sa # Cross-refs: genbank:acc:NP_050550;genbank:gi:9633447;genbank:GeneID:1262279 Probab=86.95 E-value=0.042 Score=28.13 Aligned_cols=113 Identities=9% Similarity=0.042 Sum_probs=21.7 Q ss_pred CCchhHHHHHH--------------HHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHH Q lcl|Aclame:pro 1 MSTDGKLVSVY--------------EEKIRNAKSLEELKQVWDEVQLQVADHKTQKRLWKAKEKREFELKYQ--EFEKLK 64 (277) Q Consensus 1 mstd~KL~avy--------------EEe~kka~kleELkQK~EEaeKQiad~k~ekK~E~ErQKaEiE~QRa--EiEkqK 64 (277) +.--.+|.+.. .|+...++...+++++..+++.+...++. ++.+.+-++++...++. +..... T Consensus 585 ~p~~~el~~~ir~~~~~~~~~~~~~~e~q~~~~~~q~~~~~q~~lq~~~~~a~~-~k~eae~~~a~a~a~~~~~~a~~~~ 663 (714) T protein:vir:81 585 VPQKQEFVERIRAALGTPKSPDEMTPEEQEVAAQQQALQQQQAELQMREMAGRV-AKLEADAARAHAAAQRDNASAQREV 663 (714) T ss_pred CCCHHHHHHHHHHHcCCCCCccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHH Confidence 11111111111 11111111222222222222222111111 22222222222211111 111122 Q ss_pred HHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHH Q lcl|Aclame:pro 65 AELSQKKKKVKKERVDVK-VKITKKWINSRLFTAEHYIAMLQQSKDGLQLLFL 116 (277) Q Consensus 65 AEiErqKkEiEkqkaEiE-~k~qKkEiEsQkaEAErqkAElErqR~EIElL~L 116 (277) +..+.++......++++- ......-.+..-+-..++..+. ..+.++.|-| T Consensus 664 ~~~~~~~~~~~~~~a~~a~~~~~~~~~~~~~~~~~~q~~q~--~~~~~~~~~~ 714 (714) T protein:vir:81 664 ALTQGQRYVDALNQAHTAEIITGVQNMEQEQDVLQQQMLYT--LQQRMNEMSL 714 (714) T ss_pred HHHHHHHHHHHHHHHHHHHHHHhHhhhhhhhHHHHHHHHHH--HHHHHHhcCC Confidence 222222222111111110 0000011111111111222222 1122222222 No 15 >protein:vir:3296 Length: 714 # NCBI annotation: putative portal protein # Family: family:all:487 # MgeID: mge:66 # MgeName: 933W # Cross-refs: genbank:acc:NP_049512;genbank:gi:9632518;genbank:GeneID:1262005 Probab=86.95 E-value=0.042 Score=28.13 Aligned_cols=113 Identities=9% Similarity=0.042 Sum_probs=21.7 Q ss_pred CCchhHHHHHH--------------HHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHH Q lcl|Aclame:pro 1 MSTDGKLVSVY--------------EEKIRNAKSLEELKQVWDEVQLQVADHKTQKRLWKAKEKREFELKYQ--EFEKLK 64 (277) Q Consensus 1 mstd~KL~avy--------------EEe~kka~kleELkQK~EEaeKQiad~k~ekK~E~ErQKaEiE~QRa--EiEkqK 64 (277) +.--.+|.+.. .|+...++...+++++..+++.+...++. ++.+.+-++++...++. +..... T Consensus 585 ~p~~~el~~~ir~~~~~~~~~~~~~~e~q~~~~~~q~~~~~q~~lq~~~~~a~~-~k~eae~~~a~a~a~~~~~~a~~~~ 663 (714) T protein:vir:32 585 VPQKQEFVERIRAALGTPKSPDEMTPEEQEVAAQQQALQQQQAELQMREMAGRV-AKLEADAARAHAAAQRDNASAQREV 663 (714) T ss_pred CCCHHHHHHHHHHHcCCCCCccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHH Confidence 11111111111 11111111222222222222222111111 22222222222211111 111122 Q ss_pred HHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHH Q lcl|Aclame:pro 65 AELSQKKKKVKKERVDVK-VKITKKWINSRLFTAEHYIAMLQQSKDGLQLLFL 116 (277) Q Consensus 65 AEiErqKkEiEkqkaEiE-~k~qKkEiEsQkaEAErqkAElErqR~EIElL~L 116 (277) +..+.++......++++- ......-.+..-+-..++..+. ..+.++.|-| T Consensus 664 ~~~~~~~~~~~~~~a~~a~~~~~~~~~~~~~~~~~~q~~q~--~~~~~~~~~~ 714 (714) T protein:vir:32 664 ALTQGQRYVDALNQAHTAEIITGVQNMEQEQDVLQQQMLYT--LQQRMNEMSL 714 (714) T ss_pred HHHHHHHHHHHHHHHHHHHHHHhHhhhhhhhHHHHHHHHHH--HHHHHHhcCC Confidence 222222222111111110 0000011111111111222222 1122222222 No 16 >protein:vir:9263 Length: 725 # NCBI annotation: 1 # Family: family:all:487 # MgeID: mge:164 # MgeName: ST64T # Cross-refs: genbank:acc:NP_720327;genbank:gi:24371585;genbank:GeneID:955785 Probab=86.49 E-value=0.045 Score=27.96 Aligned_cols=142 Identities=12% Similarity=0.064 Sum_probs=30.7 Q ss_pred CCchhHHHHHHHHHHHHhhhH--------HHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--H Q lcl|Aclame:pro 1 MSTDGKLVSVYEEKIRNAKSL--------EELKQVW-----DEVQLQVADHKTQKRLWKAKEKREFELKYQEFEKLK--A 65 (277) Q Consensus 1 mstd~KL~avyEEe~kka~kl--------eELkQK~-----EEaeKQiad~k~ekK~E~ErQKaEiE~QRaEiEkqK--A 65 (277) -..|+..+....+.+++..-. .+..++. .+.++ ...... +++....+++.+.++++.|..+ + T Consensus 558 ~~~d~~~~~e~~erirkq~~~~~~~~~~~~e~~q~~~~~qqa~~~q-~~~e~~--~~qa~~~~~qae~~kaqaE~~k~q~ 634 (725) T protein:vir:92 558 TLLDGKGVEMMRDYANKQLIQMGVKKPETPEEQQWLVEAQQAKQGQ-QDPAMV--QAQGVLLQGQAELAKAQNQTLSLQI 634 (725) T ss_pred hcccchHHHHHHHHHHhhhchhccCCccchhhhHHHHHHHHHHHhh-hHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHH Confidence 112334444444444332100 0000100 01111 000010 1111111122222222222222 1 Q ss_pred HHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHhh-----HHHHHHHHHHHHHHHHHcCe----eeeeecc Q lcl|Aclame:pro 66 ELSQKKKKVKKERVDVK--VKITKKWINSRLFTAEHYIAMLQQS-----KDGLQLLFLRRAKLVENQGY----LMLEVKK 134 (277) Q Consensus 66 EiErqKkEiEkqkaEiE--~k~qKkEiEsQkaEAErqkAElErq-----R~EIElL~L~~a~L~Eq~g~----L~L~~kk 134 (277) +..+...+.+...++.- +.....+....+.++....++.+++ +...|+ .++...-..+++. -+-.-.+ T Consensus 635 ~a~~~~~~a~~~aa~~~~~~~q~~~~q~~~~~~~~~~~~~~q~~~~~~a~~~ae~-~l~~~~~~~~~~~d~~~~~~~~~~ 713 (725) T protein:vir:92 635 DAAKVEAQNQLNAARIAEIFNNMDLSKQSEFREFLKTVASFQQDRSEDARANAEL-LLKGNEQTHKQRMDIANILQSQRQ 713 (725) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHhchH-HHHHHHHHHHHHHHHHHHhcchhc Confidence 22222222111111110 0000001111111111111111111 111111 1111111111110 1112224 Q ss_pred ceeeEEEcCcce Q lcl|Aclame:pro 135 MKKVWVLNGEPL 146 (277) Q Consensus 135 gkK~~vl~~~pl 146 (277) .+.+--++.+|- T Consensus 714 ~~~~~~~~~~~~ 725 (725) T protein:vir:92 714 NQPSGSVAETPQ 725 (725) T ss_pred cCCccccccCCC Confidence 444445566665 No 17 >protein:vir:1084 Length: 437 # NCBI annotation: capsid protein # Family: family:all:21 # MgeID: mge:21 # MgeName: bIL309 # Cross-refs: genbank:acc:NP_076738;genbank:gi:13095848;genbank:GeneID:920418 Probab=86.26 E-value=0.047 Score=27.87 Aligned_cols=215 Identities=13% Similarity=0.023 Sum_probs=41.6 Q ss_pred hHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 5 GKLVSVYEEKIRNAKSLEELKQVWDEVQLQVADHKTQKRLWKAKEKREFELKYQEFEKLKAELSQKKKKVKKERVDVKVK 84 (277) Q Consensus 5 ~KL~avyEEe~kka~kleELkQK~EEaeKQiad~k~ekK~E~ErQKaEiE~QRaEiEkqKAEiErqKkEiEkqkaEiE~k 84 (277) |||+...++...... ++..+.+|++....+ ......+.++.++|+.....+++.+++++++.++..+....+.+.. T Consensus 1 Mki~elk~el~~~~~---el~~~~~elr~~~~~-~~~~~~el~~~~~e~~~~~~ei~el~~~l~~~~~~~~~~~e~~~~~ 76 (437) T protein:vir:10 1 MKIEKLKKDLATKTA---ELNTKKAEIRSFTES-EDKTIDEVKAGMTEIKEKEDEIKEIRSNIEVLEQASALKVEEKRDD 76 (437) T ss_pred CCHHHHHHHHHHHHH---HHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Confidence 776654333222222 223333333322221 1111223333334444444444444444444443333222222211 Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHH-HHHHcCeeeeeeccceeeEEEcCcceeeecccCCcchheeeee Q lcl|Aclame:pro 85 ITKKWINSRLFTAEHYIAMLQQSKDGLQLLFLRRAK-LVENQGYLMLEVKKMKKVWVLNGEPLLLEKNKFPFGKKFVAVW 163 (277) Q Consensus 85 ~qKkEiEsQkaEAErqkAElErqR~EIElL~L~~a~-L~Eq~g~L~L~~kkgkK~~vl~~~pl~l~k~k~~~~~~~~~~~ 163 (277) ......+...........+.++...++......... ..+.. .+..+.+.... . T Consensus 77 ~~~~~~e~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~-------~---------- 130 (437) T protein:vir:10 77 SDLVAPELEENSADNEEDDPEKLKTETKSEAEKDKKTVKDEE---------KRDAGGLQDMK-------L---------- 130 (437) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---------HHhHHHHhHHH-------H---------- Confidence 111111111111111111111111111111000000 00000 00000000000 0 Q ss_pred eecCCCceeechhhhhHHHHHHHhhccchHHHHHHHHHHHHHHHHhhcCChhHHHHHHHHHHHhHHHHHHhhccchhhHH Q lcl|Aclame:pro 164 FTLPDYPYTLNLVVDEKIRQLTLKTLNAPQIIHSVIKTKFFEALAKVGAGPDLMMLIIGVIMGVGIGVAIGFGIANANLT 243 (277) Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (277) .........-. ....+. +.+.-..+++... +.|--.+|---+.. .|--....+. T Consensus 131 ------------~~~~~~~~~~~-----~~~~~~-~~~~e~~~~~~~~-~~~~g~lvp~~~~~-----~i~~~~~~~~-- 184 (437) T protein:vir:10 131 ------------KVGGEIADKKV-----TAFADY-LKTGEVRDVTGIA-LKDGKVIIPETILT-----PEKEVHQFPR-- 184 (437) T ss_pred ------------HHHHHHHHhhh-----hhhHHH-HHhhhhhhhhhcc-cccccccchHHHHH-----HHHHhhhhhh-- Confidence 00000000000 000011 1111111222211 11100011000000 0000001111 Q ss_pred HHhhhhh--ccccccc--ccc--cee-eccc----eecCCCC--CCC Q lcl|Aclame:pro 244 HLLSQHV--ANTTTTH--LAT--TTT-TTTP----FTIPSNN--TKG 277 (277) Q Consensus 244 ~~~~~~~--~~~~~~~--~~~--~~~-~~~~----~~~~~~~--~~~ 277 (277) |.+.+ .++++.. -|. +++ .... -.+|... +-+ T Consensus 185 --l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~e~~~~~~~ 229 (437) T protein:vir:10 185 --LGSLVRTESVTTTTGKLPIFNNSTDLLTAHTEYGQTTKNATPVIT 229 (437) T ss_pred --hhhcceeEeeccCceeeEEeeccccccccccccccccccccccce Confidence 11111 1111000 000 000 0000 0111110 111 No 18 >protein:vir:100920 Length: 725 # NCBI annotation: Gp1 # Family: family:all:487 # MgeID: mge:1509 # MgeName: ST104 # Cross-refs: genbank:acc:YP_006406;genbank:gi:46358698;genbank:GeneID:2777070 Probab=85.85 E-value=0.05 Score=27.73 Aligned_cols=146 Identities=11% Similarity=-0.008 Sum_probs=31.8 Q ss_pred CCchhHHHHHHHHHHHHhhhH------H--HHHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 1 MSTDGKLVSVYEEKIRNAKSL------E--ELKQ-----VWDEVQLQVADHKTQKRLWKAKEKREFELKYQEFEKLKAEL 67 (277) Q Consensus 1 mstd~KL~avyEEe~kka~kl------e--ELkQ-----K~EEaeKQiad~k~ekK~E~ErQKaEiE~QRaEiEkqKAEi 67 (277) -..|+..+....+.+++..-. + +..+ ++.+..+ ...... +++....+++.|.++++.|..++.+ T Consensus 558 ~~~d~~~~~e~~erirkq~~~~~~~~~~~~e~~q~~~e~qq~~~~q-~~~e~~--q~~~~~~~~qae~~ka~aE~~k~~~ 634 (725) T protein:vir:10 558 TLLDGKGVEMMRDYANKQLIQMGVKKPETPEEQQWLVEAQQAKQGQ-QDPAMV--QAQGVLLQGQAELAKAQNQTLSLQI 634 (725) T ss_pred hcCCchhHHHHHHHHHhhhhhhccCCccccchhHHHHHHHHHHHhh-hHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHH Confidence 122455555555544432110 0 0000 0001110 111011 1111111222222223222222221 Q ss_pred HHHHHHHHHHHHHHHH----H----HHHHHHHHHH-HHHHHHHHHHHhhHHHHHHHHHHHHHHHHHcCeeeeeeccceee Q lcl|Aclame:pro 68 SQKKKKVKKERVDVKV----K----ITKKWINSRL-FTAEHYIAMLQQSKDGLQLLFLRRAKLVENQGYLMLEVKKMKKV 138 (277) Q Consensus 68 ErqKkEiEkqkaEiE~----k----~qKkEiEsQk-aEAErqkAElErqR~EIElL~L~~a~L~Eq~g~L~L~~kkgkK~ 138 (277) +..+.+.+.+....+. . .++++++... ..+.-++...++.+.+.++ .....+.....-+-.-++.+ | T Consensus 635 ~a~~~~~~a~~~a~~~~~~~~q~~~~q~~~~~~~~~~~~~~q~~~~~~~~~~ae~---~~~~~~~~~~~~~~~~~~~~-~ 710 (725) T protein:vir:10 635 DAAKVEAQNQLNAARIAEIFNNMDLSKQSEFREFLKTVASFQQDRSEDARANAEL---LLKGNEQTHKQRMDIANILQ-S 710 (725) T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhHH---HHHHHHHHHHHHhhhhhccc-c Confidence 1111111111111110 0 1111111100 0000111111122222222 12233333233333333332 2 Q ss_pred EEEcCcceeeecccC Q lcl|Aclame:pro 139 WVLNGEPLLLEKNKF 153 (277) Q Consensus 139 ~vl~~~pl~l~k~k~ 153 (277) +.-.=.|.-...+-- T Consensus 711 q~~~~~~~~~~~~~~ 725 (725) T protein:vir:10 711 QRQNQPSGSVAETPQ 725 (725) T ss_pred ccccCCCcccccCCC Confidence 211111111111110 No 19 >protein:vir:4339 Length: 395 # NCBI annotation: major head protein # Family: family:all:585 # MgeID: mge:93 # MgeName: D3 # Cross-refs: genbank:acc:NP_061502;genbank:gi:9635591;genbank:GeneID:1262860 Probab=84.11 E-value=0.063 Score=27.17 Aligned_cols=166 Identities=13% Similarity=0.077 Sum_probs=30.3 Q ss_pred CCchhHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 1 MSTDGKLVSVYEEKIRNAKSLEELKQVWDEVQLQVADHKTQKRLWKAKEKREFELKYQEFEKLKAELSQKKKKVKKERVD 80 (277) Q Consensus 1 mstd~KL~avyEEe~kka~kleELkQK~EEaeKQiad~k~ekK~E~ErQKaEiE~QRaEiEkqKAEiErqKkEiEkqkaE 80 (277) || ...++++|++++.++..+++.+..++...+.+.-..+.+..+++++...+++....++++. T Consensus 1 m~-------------~~~k~l~el~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~---- 63 (395) T protein:vir:43 1 MS-------------DFEKQIGELNASLKQVGDQIKSQAEQVNTQIANFGEMNKETRAKVDELLTAQGELQARLSA---- 63 (395) T ss_pred Ch-------------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHH---- Confidence 22 2223344444444444333332222212222222222222222222222222111111110 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHcCeeeeeeccceeeEEEcCcceeeecccCCcchhee Q lcl|Aclame:pro 81 VKVKITKKWINSRLFTAEHYIAMLQQSKDGLQLLFLRRAKLVENQGYLMLEVKKMKKVWVLNGEPLLLEKNKFPFGKKFV 160 (277) Q Consensus 81 iE~k~qKkEiEsQkaEAErqkAElErqR~EIElL~L~~a~L~Eq~g~L~L~~kkgkK~~vl~~~pl~l~k~k~~~~~~~~ 160 (277) .+.+. ...+.....-...+. .... .......++ +.... ++.+ .+... T Consensus 64 ~~~~~---------~~~~~~~~~~~~~~~-~~~~---~~~~~~~~~-~~~~~---~~~~-----~~~~~----------- 110 (395) T protein:vir:43 64 AEQAM---------LANEKRDGGEEAPKT-AGQM---VAESLKEQG-VTSSL---RGSH-----RVSMP----------- 110 (395) T ss_pred HHHHH---------Hhhhccccccchhhh-HHHH---HHHHHHHHH-HHHHh---hhhh-----hhhhh----------- Confidence 00000 000000000000000 0000 000000000 00000 0000 00000 Q ss_pred eeeeecCCCceeechhhhhHHHHHHHhhccchHHHHHHHHHHHHHHHHhhcCChhHHHHHHHHHHHhHHHHHHhhccchh Q lcl|Aclame:pro 161 AVWFTLPDYPYTLNLVVDEKIRQLTLKTLNAPQIIHSVIKTKFFEALAKVGAGPDLMMLIIGVIMGVGIGVAIGFGIANA 240 (277) Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (277) -+..+-.+.++..++-.-+-+.+++.+-. . T Consensus 111 --------------------~~~~~~~~~~~g~~vp~~~~~~ii~~~~~-----------------------------~- 140 (395) T protein:vir:43 111 --------------------RSAITSIDGSGGALVAPDRRPGVVAAPQR-----------------------------R- 140 (395) T ss_pred --------------------hhhhcccCCCCccccchhhHHHHHHHHHh-----------------------------h- Confidence 00000000000000000000111111100 0 Q ss_pred hHHHHhhhhhccccccccccceeeccceecCCCCCC---C Q lcl|Aclame:pro 241 NLTHLLSQHVANTTTTHLATTTTTTTPFTIPSNNTK---G 277 (277) Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~ 277 (277) +-|.+.++.. ++.++.+++|-.++. + T Consensus 141 ---~~l~~l~~~~--------~~~~~~~~~~~~~~~~~~a 169 (395) T protein:vir:43 141 ---LTIRDLVAPG--------TTESNSVEYVRETGFVNNA 169 (395) T ss_pred ---hhHHhhccce--------ecCCCceEEEEEecCCCce Confidence 1111121111 112334566643332 1 No 20 >protein:vir:77597 Length: 725 # NCBI annotation: portal protein # Family: family:all:487 # MgeID: mge:46 # MgeName: P22 # Cross-refs: genbank:acc:YP_063735;genbank:gi:51236726;genbank:GeneID:2944241 Probab=82.20 E-value=0.079 Score=26.63 Aligned_cols=138 Identities=14% Similarity=0.061 Sum_probs=22.3 Q ss_pred CCchhHHHHHHHHHHHHhhhHHHH--------HHHHHHHH-HHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 1 MSTDGKLVSVYEEKIRNAKSLEEL--------KQVWDEVQ-LQVADHKTQ-KRLWKAKEKREFELKYQEFEKLKAELSQK 70 (277) Q Consensus 1 mstd~KL~avyEEe~kka~kleEL--------kQK~EEae-KQiad~k~e-kK~E~ErQKaEiE~QRaEiEkqKAEiErq 70 (277) ...|+..+....+..++..-.... .++..+.+ .+......+ .+++....+++.+.++++.|..++...-. T Consensus 558 ~l~d~~~~~e~~erirkq~~~~~~~q~~~~~e~q~~~~~qq~~~~q~~~e~~q~q~~~~~~qa~~~kaq~e~~k~q~~a~ 637 (725) T protein:vir:77 558 TLLDGKGVEMMRDYANKQLIQMGVKKPETPEEQQWLVEAQQAKQGQQDPAMVQAQGVLLQGQAELAKAQNQTLSLQIDAA 637 (725) T ss_pred ccccchHHHHHHHHHHhhhhhhhccCCCChhhHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Confidence 123333344444444332111100 00000000 000000000 00011111111222222222211111111 Q ss_pred HHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHhh-----HHHHHHHHH-----------HHHHHHHHcCeeee Q lcl|Aclame:pro 71 KKKVKKERVDVKVKI----TKKWINSRLFTAEHYIAMLQQS-----KDGLQLLFL-----------RRAKLVENQGYLML 130 (277) Q Consensus 71 KkEiEkqkaEiE~k~----qKkEiEsQkaEAErqkAElErq-----R~EIElL~L-----------~~a~L~Eq~g~L~L 130 (277) +++.+.+.+..+... ...+-...+.++....+..+++ ++.+|+.+. ....|.++++-.- T Consensus 638 ~~~~~a~~~aa~~~~~~~q~~~~q~a~~~~~~~~~~~~q~~~~~~~~~~ae~~~~~~~~~~~q~~~~~~~~~~~~~~~~- 716 (725) T protein:vir:77 638 KVEAQNQLNAARIAEIFNNMDLSKQSEFREFLKTVASFQQDRSEDARANAELLLKGDEQTHKQRMDIANILQSQRQNQP- 716 (725) T ss_pred HHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHhhhHHHhhHHHHHHHHHHHHhcCC- Confidence 111111111111000 0000000001111111111110 111111000 0122332222211 Q ss_pred eeccceeeEEEcCcce Q lcl|Aclame:pro 131 EVKKMKKVWVLNGEPL 146 (277) Q Consensus 131 ~~kkgkK~~vl~~~pl 146 (277) +.-.--.|- T Consensus 717 -------~~~~~~~~~ 725 (725) T protein:vir:77 717 -------SGSVAETPQ 725 (725) T ss_pred -------CcCcccCCC Confidence 110111111 No 21 >protein:vir:9704 Length: 394 # NCBI annotation: hypothetical protein # Family: family:all:21 # MgeID: mge:174 # MgeName: 315.2 # Cross-refs: genbank:acc:NP_795466;genbank:gi:28876225;genbank:GeneID:1257769 Probab=77.06 E-value=0.13 Score=25.46 Aligned_cols=200 Identities=11% Similarity=0.009 Sum_probs=41.5 Q ss_pred HHHHhhhHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 14 KIRNAKSLEELKQVWDEVQLQVADHKTQ-KRLWKAKEKREFELKYQEFEKLKAELSQKKKKVKKERVDVKVKITKKWINS 92 (277) Q Consensus 14 e~kka~kleELkQK~EEaeKQiad~k~e-kK~E~ErQKaEiE~QRaEiEkqKAEiErqKkEiEkqkaEiE~k~qKkEiEs 92 (277) |.+ ++|++++++.++..+++.+...+ +++-.+....+++..++|++.+++|+++..++++......+... ..... T Consensus 1 M~~--~~l~el~~~l~e~~~~i~~~~~e~~~~~~~~~~~~~~~l~~eie~l~~ei~~l~~~~~~~e~~~e~~~--~~~~~ 76 (394) T protein:vir:97 1 MFE--EKIKEIKATIADLNNTIVTKTAQVKNALESDDLEAARSIKAEVEQAKANLVEAENDLKLYESSVEVGG--AENIG 76 (394) T ss_pred CcH--HHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhc--ccccc Confidence 222 24667777766666655443322 22222223344555555666666555555444443333332111 00000 Q ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHcCeeeeee---ccceeeEEEcCcceeeecccCCcchheeeeeeecCCC Q lcl|Aclame:pro 93 RLFTAEHYIAMLQQSKDGLQLLFLRRAKLVENQGYLMLEV---KKMKKVWVLNGEPLLLEKNKFPFGKKFVAVWFTLPDY 169 (277) Q Consensus 93 QkaEAErqkAElErqR~EIElL~L~~a~L~Eq~g~L~L~~---kkgkK~~vl~~~pl~l~k~k~~~~~~~~~~~~~~~~~ 169 (277) .. ....+....+...+........-........... ..+..... .+...-|-.-...-+++ T Consensus 77 ~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~t~~~gg~li--- 140 (394) T protein:vir:97 77 GK----EVTQEEKTYRESVNDFIRSKGKIVNDSLRFEGKDEVLMPINETTP---------VEPQKDGIKKENAKPVS--- 140 (394) T ss_pred cc----ccchhhHHHHHHHHHHHHHHHHHhhhhhhhhhHHHHHHHHHhhhh---------hhhhccccccccccccC--- Confidence 00 0000000000011100000000000000000000 00000000 00000000000000011 Q ss_pred ceeechhhhhHHHHHHHhhccchHHHHHHHHHHHHHHHHhhcCChhHHHHHHHHHHHhHHHHHHhhccchhhHHHHhhhh Q lcl|Aclame:pro 170 PYTLNLVVDEKIRQLTLKTLNAPQIIHSVIKTKFFEALAKVGAGPDLMMLIIGVIMGVGIGVAIGFGIANANLTHLLSQH 249 (277) Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (277) |+-+ -..+++.+...+ ++++..=.+ -+...+... +. T Consensus 141 ----------------------P~~~----~~~ii~~~~~~~-----------~l~~~~~~~----~~~~~~~~~---~~ 176 (394) T protein:vir:97 141 ----------------------SEEI----LYTPAREVKTVV-----------DLKPFTTVY----QAKKASGKY---PV 176 (394) T ss_pred ----------------------hHHH----HHHHHHHhhhhh-----------hhhhhceee----eccCcceEE---EE Confidence 1100 011111111111 000000000 000000000 00 Q ss_pred hccccccc--c---ccc----eeeccceecCCCCCCC Q lcl|Aclame:pro 250 VANTTTTH--L---ATT----TTTTTPFTIPSNNTKG 277 (277) Q Consensus 250 ~~~~~~~~--~---~~~----~~~~~~~~~~~~~~~~ 277 (277) +..++... . .+. +.+-...++....--+ T Consensus 177 ~~~~~~~~~~v~E~~~~~~~~~~~~~~v~l~~~k~~~ 213 (394) T protein:vir:97 177 LQRATTKMVTVAELEKNPALAKPDFKDVAWNIDTYRG 213 (394) T ss_pred EecCCCccceecccccccccccccceeEEeehhheee Confidence 00000000 0 000 0000111111111111 No 22 >protein:vir:100172 Length: 394 # NCBI annotation: putative major head protein # Family: family:all:21 # MgeID: mge:1524 # MgeName: phi AT3 # Cross-refs: genbank:acc:YP_025031;genbank:gi:48697264;genbank:GeneID:2948270 Probab=75.23 E-value=0.15 Score=25.11 Aligned_cols=159 Identities=16% Similarity=0.085 Sum_probs=33.1 Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 18 AKSLEELKQVWDEVQLQVADHKTQKRLWKAKEKREFELKYQEFEKLKAELSQKKKKVKKERVDVKVKITKKWINSRLFTA 97 (277) Q Consensus 18 a~kleELkQK~EEaeKQiad~k~ekK~E~ErQKaEiE~QRaEiEkqKAEiErqKkEiEkqkaEiE~k~qKkEiEsQkaEA 97 (277) |.++.++.++.++.-.++.+...+...+......|++...+++.+++++.+..+++++....... ..... T Consensus 1 M~~l~~l~~~~~~~~~e~~~~~~~~~~~~~~~~ee~~~~~~~~~~~~~~~~~l~~~i~~~e~~~~--~~~~~-------- 70 (394) T protein:vir:10 1 MDKLQTLFNEVSAKCADLNAQLNAKLQDENASVDDFQKIKDDLTAAKARRDAINDQIKDLEAENK--ANSDP-------- 70 (394) T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHhhhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--hhcch-------- Confidence 33333333222222111111111111111111223333344444444333333332222111100 00000 Q ss_pred HHHHHHHHhhHHHHHHHHHHHHHHHHHcCeeeeeeccceeeEEEcCcceeeecccCCcchheeeeeeecCCCceeechhh Q lcl|Aclame:pro 98 EHYIAMLQQSKDGLQLLFLRRAKLVENQGYLMLEVKKMKKVWVLNGEPLLLEKNKFPFGKKFVAVWFTLPDYPYTLNLVV 177 (277) Q Consensus 98 ErqkAElErqR~EIElL~L~~a~L~Eq~g~L~L~~kkgkK~~vl~~~pl~l~k~k~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (277) .+-...-++....... ... T Consensus 71 ~~~~~~~~~~~~~~~~-------------------------------------------------------------~~~ 89 (394) T protein:vir:10 71 DKPVDNAQPNGTDLKK-------------------------------------------------------------KPI 89 (394) T ss_pred hhhhhhhcccccchhh-------------------------------------------------------------hHH Confidence 0000000000000000 000 Q ss_pred hhHHHHHHHhhccchHHHHHHHHHHHHHHHHhhcC-ChhHHHHHHHHHHHhHHHHHHhhccchh---hHHHHhhhhhccc Q lcl|Aclame:pro 178 DEKIRQLTLKTLNAPQIIHSVIKTKFFEALAKVGA-GPDLMMLIIGVIMGVGIGVAIGFGIANA---NLTHLLSQHVANT 253 (277) Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~ 253 (277) +. .-+-|....|-+. ..+- .++.+-+-.-|+=|..- .+-+++.+. + T Consensus 90 ~~--------------------~~~~~~~~l~~~~~~~~~-------~~~~~t~~~gg~~vP~~~~~~ii~~~~~~---~ 139 (394) T protein:vir:10 90 DA--------------------KKKAINDFIHSHGKVIDN-------AAGHVTSTEAGVLIPEEIIYDPTAEVNSV---V 139 (394) T ss_pred HH--------------------HHHHHHHHHhccchhhhh-------hhcccccccCceeccHHHHHHHHHHHHhh---h Confidence 00 0001111111000 0000 01111111111112111 122333322 1 Q ss_pred ccccccc-ceeeccceecCCCCCC-C Q lcl|Aclame:pro 254 TTTHLAT-TTTTTTPFTIPSNNTK-G 277 (277) Q Consensus 254 ~~~~~~~-~~~~~~~~~~~~~~~~-~ 277 (277) .-....+ .++++.++++|..... + T Consensus 140 ~l~~~~~~~~~~~~~~~~~~~~~~~~ 165 (394) T protein:vir:10 140 DLSTLVTKTPVTTPKGTYPILKRATD 165 (394) T ss_pred hhhhhceeeeccCCceEEEEEecCCC Confidence 1112222 2233344555543322 2 No 23 >protein:vir:3520 Length: 720 # NCBI annotation: P19 # Family: family:all:487 # MgeID: mge:72 # MgeName: APSE-1 # Cross-refs: genbank:acc:NP_050980;genbank:gi:9633566;genbank:GeneID:1262313 Probab=74.29 E-value=0.16 Score=24.95 Aligned_cols=118 Identities=12% Similarity=0.027 Sum_probs=30.5 Q ss_pred CCchhHHHHHHHHHHHHhhh-HHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHH Q lcl|Aclame:pro 1 MSTDGKLVSVYEEKIRNAKS-LEELKQVWDEVQLQVADHKT-QKRLWKAKEKREFELKYQEFEKLKA----ELSQKKKKV 74 (277) Q Consensus 1 mstd~KL~avyEEe~kka~k-leELkQK~EEaeKQiad~k~-ekK~E~ErQKaEiE~QRaEiEkqKA----EiErqKkEi 74 (277) +...+.....-.++....+. ..++++. +.+...++. ..++..+.++++.+.+..+.+..++ .+++.+... T Consensus 587 ~~~~~~~~~~~~e~qq~~a~~qq~~qq~----~~e~~~aqa~l~qaqae~~kaqa~~~~~qa~a~~aqa~a~~~~a~~~~ 662 (720) T protein:vir:35 587 LLTQGVVKPRNTEEEQMVAQMIQQAQQP----NAELVAAQGVLMQGQAEVQKAKNEELAIQVKAFQAQTEARVAEAKMVQ 662 (720) T ss_pred cchhcccCccChhHHHHHHHHHHHHHhH----hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Confidence 21122211111122111111 1111111 111111111 1222233333333333332222222 222222211 Q ss_pred HHHHHHHHHHHHHHHH----------HHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHcCeee Q lcl|Aclame:pro 75 KKERVDVKVKITKKWI----------NSRLFTAEHYIAMLQQSKDGLQLLFLRRAKLVENQGYLM 129 (277) Q Consensus 75 EkqkaEiE~k~qKkEi----------EsQkaEAErqkAElErqR~EIElL~L~~a~L~Eq~g~L~ 129 (277) +..+++.. ++..+ ...+.++|+..+|+..+-.+.+ .+-++...+|.-+ T Consensus 663 ~~aq~~~~---~q~~i~qalq~~~~~q~~q~~~eqa~~el~~~~~~~~----~~~~~~~~~~~~~ 720 (720) T protein:vir:35 663 ILASADSA---KRAEIREALKMLHQFQKEQGDASRADAELILKATDTQ----HKQNRDAAKNHSI 720 (720) T ss_pred HHHHHHHH---HHHHHHHHHHHHHHHHHhcchHHHHHHHHhhcccchh----hhhhHHHhhccCC Confidence 11111111 11112 1123344444444433222222 2334444444433 No 24 >protein:vir:9263 Length: 725 # NCBI annotation: 1 # Family: family:all:487 # MgeID: mge:164 # MgeName: ST64T # Cross-refs: genbank:acc:NP_720327;genbank:gi:24371585;genbank:GeneID:955785 Probab=74.27 E-value=0.16 Score=24.94 Aligned_cols=124 Identities=9% Similarity=-0.025 Sum_probs=23.9 Q ss_pred CCchhHHHHHHHHHHHHhhhHHHHHHHHH---HHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 1 MSTDGKLVSVYEEKIRNAKSLEELKQVWD---EVQLQVADHKTQ---KRLWKAKEKREFELKYQEFEKLKAELSQKKKKV 74 (277) Q Consensus 1 mstd~KL~avyEEe~kka~kleELkQK~E---EaeKQiad~k~e---kK~E~ErQKaEiE~QRaEiEkqKAEiErqKkEi 74 (277) +..+..-.. +.+...+++. +..+... +.+.++..++.+ .+.|.++.+++.....++.+...++.-..+.+. T Consensus 581 ~~~~~~~e~--~q~~~~~qqa-~~~q~~~e~~~~qa~~~~~qae~~kaqaE~~k~q~~a~~~~~~a~~~aa~~~~~~~q~ 657 (725) T protein:vir:92 581 VKKPETPEE--QQWLVEAQQA-KQGQQDPAMVQAQGVLLQGQAELAKAQNQTLSLQIDAAKVEAQNQLNAARIAEIFNNM 657 (725) T ss_pred cCCccchhh--hHHHHHHHHH-HHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Confidence 222211111 1111111111 1111111 111111111111 122222222222222222222222211111111 Q ss_pred -HHHHHHH------HHHHHHHHHHHHHHHHHH-HHHHHHhhHHH---HHHHHHHH----HHHHHHcCe Q lcl|Aclame:pro 75 -KKERVDV------KVKITKKWINSRLFTAEH-YIAMLQQSKDG---LQLLFLRR----AKLVENQGY 127 (277) Q Consensus 75 -EkqkaEi------E~k~qKkEiEsQkaEAEr-qkAElErqR~E---IElL~L~~----a~L~Eq~g~ 127 (277) -.+++++ ..+.+++..+.-+..+|. ++++.+...+. .+.+.-.. ..-+++.-. T Consensus 658 ~~~q~~~~~~~~~~~~~~q~~~~~~a~~~ae~~l~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 725 (725) T protein:vir:92 658 DLSKQSEFREFLKTVASFQQDRSEDARANAELLLKGNEQTHKQRMDIANILQSQRQNQPSGSVAETPQ 725 (725) T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHhcchhccCCccccccCCC Confidence 0111111 111122222222222222 22222222222 23322110 001111111 No 25 >protein:vir:105520 Length: 706 # NCBI annotation: phage portal protein # Family: family:all:487 # MgeID: mge:1463 # MgeName: phiSG1 # Cross-refs: genbank:acc:YP_516189;genbank:gi:89885992;genbank:GeneID:3964380 Probab=69.90 E-value=0.22 Score=24.23 Aligned_cols=135 Identities=11% Similarity=0.016 Sum_probs=25.1 Q ss_pred CCchhHHHHHHHHHHHHhhh-HHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 1 MSTDGKLVSVYEEKIRNAKS-LEELKQVWDEVQLQVADHKT--QKRLWKAKEKREFELKYQEFEKLKAELSQKKKKVKKE 77 (277) Q Consensus 1 mstd~KL~avyEEe~kka~k-leELkQK~EEaeKQiad~k~--ekK~E~ErQKaEiE~QRaEiEkqKAEiErqKkEiEkq 77 (277) ...|..-+...-|..++..- ....++...+.+...++.+. ..+...+...++.+.++++.+.++++.+....+++.. T Consensus 569 ~~~d~p~~~e~~e~irk~~~~q~~~~~~~~~eq~~~~q~qq~q~~q~~~~~~~~~aq~~~~qA~~~k~~a~~~q~~~~a~ 648 (706) T protein:vir:10 569 DNMEGEGLDDFKAFNRRQLLTQGIVKPRNQQEQAIVQQAQQAQATQPDPNMLLAQAQMVVAQAEAQKSQNETVQTQIKAF 648 (706) T ss_pred hhcCccchHHHHHHHHHhhcccCCccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Confidence 11111111112222221110 00000000000000000000 0112222222223333333333333333333333333 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHcCeeeeeeccceeeEEEcCcceeeecc Q lcl|Aclame:pro 78 RVDVKVKITKKWINSRLFTAEHYIAMLQQSKDGLQLLFLRRAKLVENQGYLMLEVKKMKKVWVLNGEPLLLEKN 151 (277) Q Consensus 78 kaEiE~k~qKkEiEsQkaEAErqkAElErqR~EIElL~L~~a~L~Eq~g~L~L~~kkgkK~~vl~~~pl~l~k~ 151 (277) +++.+...+.+...+..+.+.. ......++....| ..+-..+. +. . =-.++|=-+=.+ T Consensus 649 ~a~~qa~~~~~~~~~~~~~a~~--~~~~~~~q~~q~l----~~~~a~q~--~~-~-------~~~~~~~~~~~~ 706 (706) T protein:vir:10 649 TAQQDAMESQANTVYKLAQARN--IDDKAVMETLRLL----KEVAASQQ--QT-I-------PSPPSPADIVPS 706 (706) T ss_pred HHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHH----HHHHHhcc--CC-C-------CCCCCCcccCCC Confidence 3333222222211111111100 0001111111110 01000111 00 0 011122111111 No 26 >protein:vir:104437 Length: 714 # NCBI annotation: putative phage portal protein # Family: family:all:487 # MgeID: mge:1471 # MgeName: 86 # Cross-refs: genbank:acc:YP_794061;genbank:gi:116222006;genbank:GeneID:4397502 Probab=67.66 E-value=0.25 Score=23.90 Aligned_cols=127 Identities=13% Similarity=0.027 Sum_probs=20.2 Q ss_pred CCchhHHHHHHHHHHHHhhhH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHH Q lcl|Aclame:pro 1 MSTDGKLVSVYEEKIRNAKSL----EELKQVWDEVQLQVADHKTQKRLWKAKEKREFELKYQEFEKLKAEL--SQKKKKV 74 (277) Q Consensus 1 mstd~KL~avyEEe~kka~kl----eELkQK~EEaeKQiad~k~ekK~E~ErQKaEiE~QRaEiEkqKAEi--ErqKkEi 74 (277) -..|.......-+.++++.-. ..+..+....+.+...++ ++..+.+-++.+.+.++.+++..+++- .....+. T Consensus 581 e~~d~p~~~ei~~~ir~~~~~~~~~~~~~~e~q~~q~~~~~~~-~~q~~l~~~e~~a~~~k~eaea~~~~aqa~~~~~~a 659 (714) T protein:vir:10 581 NLLDVPQKQEFVERIRAALGTPKSPDEMTPEEQEVAAQQQALQ-QQQAELQMREMAGRVAKLEADAARAHAAAQRDNASA 659 (714) T ss_pred HhcCCcCHHHHHHHHHHHcCCCCCccccCcchhHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Confidence 011222222222222222110 000000000111000000 001111111111111222111111111 0000000 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHcCe-eee Q lcl|Aclame:pro 75 KKERVDVKVKITKKWINSRLFTAEHYIAMLQQSKDGLQLLFLRRAKLVENQGY-LML 130 (277) Q Consensus 75 EkqkaEiE~k~qKkEiEsQkaEAErqkAElErqR~EIElL~L~~a~L~Eq~g~-L~L 130 (277) ....+..+.+.. ---...+++-...+.++-..++.+.+..+.....+++.. |-| T Consensus 660 ~~~~~~~~~q~~--~~~~~~a~~a~~l~~~~~~~q~~~~~~q~~~q~~~~~~~~~~~ 714 (714) T protein:vir:10 660 QREVALTQGQRY--VDALNQAHTAEIITGVQNMEQEQDVLQQQMLYTLQQRMNEMSL 714 (714) T ss_pred HHHHHHHHHHHH--HHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhcCC Confidence 001011110000 000001111111111111222222222222222222211 111 No 27 >protein:vir:3870 Length: 400 # NCBI annotation: major head protein # Family: family:all:21 # MgeID: mge:82 # MgeName: A2 # Cross-refs: genbank:acc:NP_680487;swissprot:trembl:q8ltc0;genbank:gi:22296527;interpro:IPR006444;uniprot:Q8LTC0;genbank:GeneID:951713 Probab=59.10 E-value=0.4 Score=22.77 Aligned_cols=200 Identities=12% Similarity=0.013 Sum_probs=40.2 Q ss_pred hHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 5 GKLVSVYEEKIRNAKSLEELKQVWDEVQLQVADHKTQKRLWKAKEKREFELKYQEFEKLKAELSQKKKKVKKERVDVKVK 84 (277) Q Consensus 5 ~KL~avyEEe~kka~kleELkQK~EEaeKQiad~k~ekK~E~ErQKaEiE~QRaEiEkqKAEiErqKkEiEkqkaEiE~k 84 (277) |-|.+..+++.+. +.|++++.++..+++.++.+..+.+.+ ..+++..+++++..+++++....+++..+...+.. T Consensus 1 ~~l~e~i~e~~~~---l~el~~~~~~~~~e~r~~~e~~~~~~~--~~~~~e~~~~~~~l~~ei~~l~e~~~~~~~~~~~~ 75 (400) T protein:vir:38 1 MTLDEKLAAVKKQ---LDEKRSALPAMKTELRSLLEGEDSEEN--LKKAEGVRAKYDKAGKEIKDLEEKRDLYEAALKGN 75 (400) T ss_pred CChHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHhhccchH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Confidence 6677777666553 445555555444444333222222111 12333344444444444433322222222111110 Q ss_pred H---HHH-HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHcCeeeeeeccceeeEEEcCcceeeecccCCcchhee Q lcl|Aclame:pro 85 I---TKK-WINSRLFTAEHYIAMLQQSKDGLQLLFLRRAKLVENQGYLMLEVKKMKKVWVLNGEPLLLEKNKFPFGKKFV 160 (277) Q Consensus 85 ~---qKk-EiEsQkaEAErqkAElErqR~EIElL~L~~a~L~Eq~g~L~L~~kkgkK~~vl~~~pl~l~k~k~~~~~~~~ 160 (277) . ... ....+....+...............+...... ... +..+ T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~--------------------------~~~~---- 122 (400) T protein:vir:38 76 EQSSGKKPDHPEEHSYRDALNAYLHTRGRNTDGVNFEKTD---VGT--------------------------FAVL---- 122 (400) T ss_pred hhcccccccchhhhhHHHHHHHHHhhHHHHHHHHHHHHHH---HHH--------------------------Hhhh---- Confidence 0 000 00000000000000000000000000000000 000 0000 Q ss_pred eeeeecCCCceeechhhhhHHHHHHHhhccchHHHHHHHHHHHHHHHHhhcCCh----hHHHHHHHHHHHhHHHHH-Hhh Q lcl|Aclame:pro 161 AVWFTLPDYPYTLNLVVDEKIRQLTLKTLNAPQIIHSVIKTKFFEALAKVGAGP----DLMMLIIGVIMGVGIGVA-IGF 235 (277) Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~-~~~ 235 (277) .......+... ++ ...-.+||+ ++.--||-.+.-..+=.- +.. T Consensus 123 --------------~~~~~~~~~~~----------~~--------~~~~~~gg~~vP~~~~~~ii~~~~~~~~l~~~~~~ 170 (400) T protein:vir:38 123 --------------RAVPTDASDAV----------NA--------GVKAADAASTIPETISNTPQRELQTVVDLKPFTNV 170 (400) T ss_pred --------------hhhhHHHHHHH----------hh--------cccccCCcccccHHHHHHHHHHHHhhhhhhhccee Confidence 00000000000 00 000011111 111122222111110000 000 Q ss_pred c-cchhhHHHHhhhhhccccccc-----cccce-eeccce---ecCCCCCCC Q lcl|Aclame:pro 236 G-IANANLTHLLSQHVANTTTTH-----LATTT-TTTTPF---TIPSNNTKG 277 (277) Q Consensus 236 ~-~~~~~~~~~~~~~~~~~~~~~-----~~~~~-~~~~~~---~~~~~~~~~ 277 (277) . +...+. --|.++.++... ..+.+ ++.+.| ++....--+ T Consensus 171 ~~~~~~~~---~~~~~~~~~~~~~~~~E~~~~~~~~~~~f~~i~~~~~k~~~ 219 (400) T protein:vir:38 171 FQASTQKG---TYPTVANATTKMVTVAELEKNPAMAKPEFKPVNWSVETYRQ 219 (400) T ss_pred EeccCcce---EEEEEecCCCccccccccccccccccccceeeEeehhheee Confidence 0 000000 000000000000 00000 000111 111111111 No 28 >protein:vir:1084 Length: 437 # NCBI annotation: capsid protein # Family: family:all:21 # MgeID: mge:21 # MgeName: bIL309 # Cross-refs: genbank:acc:NP_076738;genbank:gi:13095848;genbank:GeneID:920418 Probab=56.69 E-value=0.45 Score=22.48 Aligned_cols=227 Identities=15% Similarity=0.109 Sum_probs=55.8 Q ss_pred CCchhHHHHHHHHHHHHhhhH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHH-HHHHHHHHHHH Q lcl|Aclame:pro 1 MSTDGKLVSVYEEKIRNAKSL-EELKQVWDEVQLQVADHKTQKRLWKAKEKR---EFELKYQEFEKLK-AELSQKKKKVK 75 (277) Q Consensus 1 mstd~KL~avyEEe~kka~kl-eELkQK~EEaeKQiad~k~ekK~E~ErQKa---EiE~QRaEiEkqK-AEiErqKkEiE 75 (277) |-=. +|++++++...+..+. +|++++.++..+..++.+..+. +...... +++.+..+.++.. +.++..+...+ T Consensus 1 Mki~-elk~el~~~~~el~~~~~elr~~~~~~~~~~~el~~~~~-e~~~~~~ei~el~~~l~~~~~~~~~~~e~~~~~~~ 78 (437) T protein:vir:10 1 MKIE-KLKKDLATKTAELNTKKAEIRSFTESEDKTIDEVKAGMT-EIKEKEDEIKEIRSNIEVLEQASALKVEEKRDDSD 78 (437) T ss_pred CCHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Confidence 7755 7888888777777764 4777766655554444332221 1111122 2322222222111 11111111111 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHH-HHHHHcCeeeeeeccceeeEEEcCcceeeecccCC Q lcl|Aclame:pro 76 KERVDVKVKITKKWINSRLFTAEHYIAMLQQSKDGLQLLFLRRA-KLVENQGYLMLEVKKMKKVWVLNGEPLLLEKNKFP 154 (277) Q Consensus 76 kqkaEiE~k~qKkEiEsQkaEAErqkAElErqR~EIElL~L~~a-~L~Eq~g~L~L~~kkgkK~~vl~~~pl~l~k~k~~ 154 (277) ....+.+......+.+.............++....+.....+.. .+.+.......+. .......+. ++- T Consensus 79 ~~~~e~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~---------~~~ 148 (437) T protein:vir:10 79 LVAPELEENSADNEEDDPEKLKTETKSEAEKDKKTVKDEEKRDAGGLQDMKLKVGGEI-ADKKVTAFA---------DYL 148 (437) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhHHHHHHHHHH-HHhhhhhhH---------HHH Confidence 11111111112222211111111112222211111111110000 0000000000000 000000000 000 Q ss_pred cchheeeeeeecCCCceeechhhhhHHHHHHH-----hhccchHHHHHHHHH-HHHHHHHhhcCChhHHHHHHHH-HHHh Q lcl|Aclame:pro 155 FGKKFVAVWFTLPDYPYTLNLVVDEKIRQLTL-----KTLNAPQIIHSVIKT-KFFEALAKVGAGPDLMMLIIGV-IMGV 227 (277) Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~ 227 (277) .....+.+.. .+.-.|+-+...|+. +-+..|.. + +.+ -|+- T Consensus 149 ----------------------~~~e~~~~~~~~~~~~g~lvp~~~~~~i~~~~~~~~l~~---------~-~~~~~~~~ 196 (437) T protein:vir:10 149 ----------------------KTGEVRDVTGIALKDGKVIIPETILTPEKEVHQFPRLGS---------L-VRTESVTT 196 (437) T ss_pred ----------------------HhhhhhhhhhcccccccccchHHHHHHHHHhhhhhhhhh---------c-ceeEeecc Confidence 0000011110 111134333333221 11111110 0 111 1111 Q ss_pred HHHHHHhhccchhhHHHHhhhhhccccccccccceeeccceecCCCCCCC Q lcl|Aclame:pro 228 GIGVAIGFGIANANLTHLLSQHVANTTTTHLATTTTTTTPFTIPSNNTKG 277 (277) Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (277) |-| .+-+-.. +.-.+.+|+-.+..+. +++.+-...++....-.+ T Consensus 197 ~~~---~~~~~~~--~~~~~~~~~e~~~~~e-~~~~~~~~v~~~~~k~~~ 240 (437) T protein:vir:10 197 TTG---KLPIFNN--STDLLTAHTEYGQTTK-NATPVITPILWDLKTYTG 240 (437) T ss_pred Cce---eeEEeec--cccccccccccccccc-cccccceeeeeehhheee Confidence 111 0000000 0001112222211111 111112223332222222 No 29 >protein:vir:962 Length: 397 # NCBI annotation: capsid protein # Family: family:all:21 # MgeID: mge:19 # MgeName: bIL285 # Cross-refs: genbank:acc:NP_076616;genbank:gi:13095724;genbank:GeneID:920264 Probab=55.56 E-value=0.48 Score=22.35 Aligned_cols=201 Identities=13% Similarity=0.126 Sum_probs=29.4 Q ss_pred CCchh-HHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHH Q lcl|Aclame:pro 1 MSTDG-KLVSVYEEKIRNAKSLEELKQVWDEVQLQVADHKTQKRLWKAKEKREFELKYQEFEKLKAELSQKK---KKVKK 76 (277) Q Consensus 1 mstd~-KL~avyEEe~kka~kleELkQK~EEaeKQiad~k~ekK~E~ErQKaEiE~QRaEiEkqKAEiErqK---kEiEk 76 (277) |+-.- +|.+.+.|...+ +.+|+++.++.+.+.++.... .+..+...++....++++.++.++.... +++++ T Consensus 1 m~~k~~~l~~~~~el~~~---l~eL~e~~~~l~~~~~el~~~--~ee~~~~e~~~~~~~~~~~l~~~i~~l~~~i~~~~~ 75 (397) T protein:vir:96 1 MALKQLILNKQIKERSSE---IDKLLSQRSDLEKQENDLERA--LEEAKTDEEISTVSDSADDLEKQVKDLDEKIAELQK 75 (397) T ss_pred CcHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHH--HHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Confidence 65431 222222222222 444444444444433322211 1111111111111122222222222111 11111 Q ss_pred HHHHHHHH--HHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHcCeeeeeeccceeeEEEcCcceeeecccCC Q lcl|Aclame:pro 77 ERVDVKVK--ITKKWINSRLFTAEHYIAMLQQSKDGLQLLFLRRAKLVENQGYLMLEVKKMKKVWVLNGEPLLLEKNKFP 154 (277) Q Consensus 77 qkaEiE~k--~qKkEiEsQkaEAErqkAElErqR~EIElL~L~~a~L~Eq~g~L~L~~kkgkK~~vl~~~pl~l~k~k~~ 154 (277) +..+++.+ ...........+.+. ..+...........+.+..+....+.+ ..-......-. T Consensus 76 ~~~~l~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~ 138 (397) T protein:vir:96 76 EKQDLEDELAKAADPTDQKPKDGEK---------RKMKKFKVTEEELAEKRSAINAFVKSK--------GAEKRDGFTSV 138 (397) T ss_pred HHHHHHHHHHhhhhhhhhhhHHHHH---------HHHHHHhhhhHHHHHHHHHHHHHHHhh--------hhhhhhccccc Confidence 11111100 000000000000000 000000000000000000000000000 00000000000 Q ss_pred cchheeeeeeecCCCceeechhhhhHHHHHHHhhccchHHHHHHHHHHHHHHHHhhcCChhHHHHHHHHHHHhHHHHHHh Q lcl|Aclame:pro 155 FGKKFVAVWFTLPDYPYTLNLVVDEKIRQLTLKTLNAPQIIHSVIKTKFFEALAKVGAGPDLMMLIIGVIMGVGIGVAIG 234 (277) Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (277) +|. +++| +-+ -+...+ +...+ ++.- .++++ T Consensus 139 ~~~------~~vp-------------------------~~~----~~~i~~-~~~~~---~l~~-~~~~~---------- 168 (397) T protein:vir:96 139 EGG------ALIP-------------------------QEL----LQPQLE-PKDIV---DLSK-YVRSV---------- 168 (397) T ss_pred ccc------cchh-------------------------HHH----HHHHHH-hhhhh---hHHH-hhhhc---------- Confidence 000 0011 000 001111 00000 0000 00000 Q ss_pred hccchhhHHHHhhhhhcccc-cccc---ccce--eeccceecCC---CCCCC Q lcl|Aclame:pro 235 FGIANANLTHLLSQHVANTT-TTHL---ATTT--TTTTPFTIPS---NNTKG 277 (277) Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~-~~~~---~~~~--~~~~~~~~~~---~~~~~ 277 (277) -+...|.. -+++..++ .+.. ..+. ++.+.|.--+ ..-.+ T Consensus 169 -~~~~~~~~---~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~i~~~~~~~~~ 216 (397) T protein:vir:96 169 -PVNSASGK---FPVISKSGSKMATVQQLEKNPQLANPKMVEIDYSVATRRG 216 (397) T ss_pred -ccccccee---EEEEeccCCccccccccccccccccccccceeecHhHhhc Confidence 00000000 01111000 0000 0000 0011111100 00001 No 30 >protein:vir:95376 Length: 425 # NCBI annotation: phage major capsid protein # Family: family:all:635 # MgeID: mge:1567 # MgeName: GBSV1 # Cross-refs: genbank:acc:YP_764476;genbank:gi:115334630;genbank:GeneID:5179263 Probab=53.49 E-value=0.53 Score=22.11 Aligned_cols=185 Identities=15% Similarity=0.109 Sum_probs=40.0 Q ss_pred hHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 5 GKLVSVYEEKIRNAKSLEELKQVWDEVQLQVADHKTQKRLWKAKEKREFELKYQEFEKLKAELSQKKKKVKKERVDVKVK 84 (277) Q Consensus 5 ~KL~avyEEe~kka~kleELkQK~EEaeKQiad~k~ekK~E~ErQKaEiE~QRaEiEkqKAEiErqKkEiEkqkaEiE~k 84 (277) |.|+-. ..+.++++++.+.+|+.++..+ .+.+++|++.+..+. +..+|+..-..++++ ++ T Consensus 1 ~~~~~~-----~~~~el~~~~~~l~el~~~~~e--------l~~~~~el~~~~e~a-k~eee~~~l~~ei~~------le 60 (425) T protein:vir:95 1 MALRQL-----MLTKKIEQRKAALDELVKREQE--------LQAKAAELEQAIEEA-QTEEEVSAVEEEVAK------LE 60 (425) T ss_pred CchHHH-----HHHHHHHHHHHHHHHHHHHHHH--------HHHHHHHHHHHHHHh-hhHHHHHHHHHHHHH------HH Confidence 433321 2222233333333333322221 112222222111100 000111111111110 11 Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHcCeeeeeeccceeeEEEcCcceeeecccCCcchheeeeee Q lcl|Aclame:pro 85 ITKKWINSRLFTAEHYIAMLQQSKDGLQLLFLRRAKLVENQGYLMLEVKKMKKVWVLNGEPLLLEKNKFPFGKKFVAVWF 164 (277) Q Consensus 85 ~qKkEiEsQkaEAErqkAElErqR~EIElL~L~~a~L~Eq~g~L~L~~kkgkK~~vl~~~pl~l~k~k~~~~~~~~~~~~ 164 (277) ..+++++....+++.+.+.++...+.++. ....+. .++.+ .-.. T Consensus 61 ~e~~~l~~~~~~le~~~~~~~~~l~~~~~-----~~~~~~----------~~~~~------------~~~~--------- 104 (425) T protein:vir:95 61 DERNELNEKKSKLEGEIAQLEDELEQINS-----KQPSNQ----------SRQKM------------QGSK--------- 104 (425) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhh-----hccchh----------hhhhh------------hhhh--------- Confidence 12222223322333222222221111110 000000 00000 0000 Q ss_pred ecCCCceeechhhhhHHHHHHHhhccchHHHHHHHHHHHHHHHHhh-----cCChhHHHHHHHHHHHhHHHHHHhhccch Q lcl|Aclame:pro 165 TLPDYPYTLNLVVDEKIRQLTLKTLNAPQIIHSVIKTKFFEALAKV-----GAGPDLMMLIIGVIMGVGIGVAIGFGIAN 239 (277) Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (277) ...++ .-+..+.+.+.+. +.+.+.-.-. +...++. .-|+-|.. T Consensus 105 ---------~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~---~gg~~vP~ 152 (425) T protein:vir:95 105 ---------GDVVE-------------------MNRLQVREMLKTGEYYKRSEVVEFYEKF-RNLRAVA---GGELTIPE 152 (425) T ss_pred ---------hhHHH-------------------HHHHHHHHHHhhhhhhhhhHHHHHHHHH-Hhhcccc---cCceeccH Confidence 00001 0111122222111 0111111111 1111110 11121222 Q ss_pred hhHHHHhhhhhccccccccccceeeccceecCCCCCCC Q lcl|Aclame:pro 240 ANLTHLLSQHVANTTTTHLATTTTTTTPFTIPSNNTKG 277 (277) Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (277) --...++..=...+.-....|..+++....||-..+.+ T Consensus 153 ~~~~~Ii~~l~~~~~i~~~~~~~~~~g~~~ip~~~~~~ 190 (425) T protein:vir:95 153 VVVNRIMDIMGDYTTLYPLVDKIRVKGTTRILVDTDTS 190 (425) T ss_pred HHHHHHHHHHHhhhhHHHhhceeecCceeEEEEecCCc Confidence 11111221111122222222222333455677655555 No 31 >protein:vir:81160 Length: 371 # NCBI annotation: major capsid protein # Family: family:all:21 # MgeID: mge:1892 # MgeName: Geobacillus virus E2 # Cross-refs: genbank:acc:YP_001285811;genbank:gi:148747732;genbank:GeneID:5247203 Probab=53.02 E-value=0.54 Score=22.05 Aligned_cols=143 Identities=16% Similarity=0.193 Sum_probs=32.3 Q ss_pred CCchhHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 1 MSTDGKLVSVYEEKIRNAKSLEELKQVWDEVQLQVADHKTQKRLWKAKEKREFELKYQEFEKLKAELSQKKKKVKKERVD 80 (277) Q Consensus 1 mstd~KL~avyEEe~kka~kleELkQK~EEaeKQiad~k~ekK~E~ErQKaEiE~QRaEiEkqKAEiErqKkEiEkqkaE 80 (277) ||- +|++..|+..... +|.+. +.. +.+.++++..++|++..++++++.+...++.+.. T Consensus 1 M~k--~l~~l~e~~~~~~----------~e~~~----~~~------~~~~e~~~~~~~ei~~l~~~i~~~~~~~~~~~~~ 58 (371) T protein:vir:81 1 MPK--ELRELLEQINNKK----------EEARK----LLA------ENKIEEAKKLKEEIVALQEKFDVAKELYEEQKQT 58 (371) T ss_pred CcH--HHHHHHHHHHHHH----------HHHHH----Hhh------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh Confidence 442 2333222221111 11111 111 1111234444444444444444443332222211 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHcCeeeeeeccceeeEEEcCcceeeecccCCcchhee Q lcl|Aclame:pro 81 VKVKITKKWINSRLFTAEHYIAMLQQSKDGLQLLFLRRAKLVENQGYLMLEVKKMKKVWVLNGEPLLLEKNKFPFGKKFV 160 (277) Q Consensus 81 iE~k~qKkEiEsQkaEAErqkAElErqR~EIElL~L~~a~L~Eq~g~L~L~~kkgkK~~vl~~~pl~l~k~k~~~~~~~~ 160 (277) ......... ........+...... T Consensus 59 ~~~~~~~~~----------~~~~~~~~~~~~~~~---------------------------------------------- 82 (371) T protein:vir:81 59 IEDKEPLKP----------TVQVKENEVEAFVNH---------------------------------------------- 82 (371) T ss_pred hcccccccc----------chhhHHHHHHHHHHH---------------------------------------------- Confidence 110000000 000000000000000 Q ss_pred eeeeecCCCceeechhhhhHHHHHHHhhccchHHHHHHHHHHHHHHHHhhcCChhHHHHHHHHHHHhHHHHHHhhccchh Q lcl|Aclame:pro 161 AVWFTLPDYPYTLNLVVDEKIRQLTLKTLNAPQIIHSVIKTKFFEALAKVGAGPDLMMLIIGVIMGVGIGVAIGFGIANA 240 (277) Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (277) +++.+-.++. .|..++- |..|.--+++. T Consensus 83 --------------------------------------l~~~~~~a~~-~~t~~~g-------------g~~vP~~~~~~ 110 (371) T protein:vir:81 83 --------------------------------------IRTRFRNAMS-EGSNQDG-------------GYTVPQDIQTR 110 (371) T ss_pred --------------------------------------HHHHHHHhhc-cCCCccC-------------ceeecHhHHHH Confidence 0111111110 1111110 11111111110 Q ss_pred hHHHHhhhh--hcc-ccccccccceeeccceecCCCCCCC Q lcl|Aclame:pro 241 NLTHLLSQH--VAN-TTTTHLATTTTTTTPFTIPSNNTKG 277 (277) Q Consensus 241 ~~~~~~~~~--~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (277) +-.++.+. +.. -+..+. ++.+..+.+|-..+.+ T Consensus 111 -ii~~~~~~s~i~~~~~~~~~---~~~~~~~~~~~~~~~~ 146 (371) T protein:vir:81 111 -INELRESKDALQNLITVEPV---TTLSGSRVFKKRSQQT 146 (371) T ss_pred -HHHHHHhhhhhhhhceeeec---cCCceeEEEEeecCCc Confidence 11111111 111 111221 1223345555544444 No 32 >protein:vir:100884 Length: 389 # NCBI annotation: major head protein # Family: family:all:21 # MgeID: mge:1473 # MgeName: Lc-Nu # Cross-refs: genbank:acc:YP_358764;genbank:gi:78000028;genbank:GeneID:3726155 Probab=48.10 E-value=0.68 Score=21.50 Aligned_cols=164 Identities=18% Similarity=0.195 Sum_probs=29.5 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 21 LEELKQVWDEVQLQVADHKTQKRLWKAKEKREFELKYQEFEKLKAELSQKKKKVKKERVDVKVKITKKWINSRLFTAEHY 100 (277) Q Consensus 21 leELkQK~EEaeKQiad~k~ekK~E~ErQKaEiE~QRaEiEkqKAEiErqKkEiEkqkaEiE~k~qKkEiEsQkaEAErq 100 (277) |++|++.+++.+++++++ +++++....+.+....++++.+++++..+.+++ .. +.+ T Consensus 1 meeL~~~~~~~~~~~~e~-----------~~~l~~~~~~~~~~~e~~~~l~~ei~~~~~~~~--~l----~~~------- 56 (389) T protein:vir:10 1 MDKLQTLFNDVSAKCADL-----------NAQLNAKLQDENASVDDFQKIKDDLTAAKARRD--AI----NDQ------- 56 (389) T ss_pred ChHHHHHHHHHHHHHHHH-----------HHHHHHHHHhHhhhHHHHHHHHHHHHHHHHHHH--HH----HHH------- Confidence 666666665555544332 222222222222222223333333222222221 01 111 Q ss_pred HHHHHhhHHHHHHHHHHHHHHHHHcCeeeeeeccceeeEEEcCcceeeecccCCcchheeeeeeecCCCceeechhhhhH Q lcl|Aclame:pro 101 IAMLQQSKDGLQLLFLRRAKLVENQGYLMLEVKKMKKVWVLNGEPLLLEKNKFPFGKKFVAVWFTLPDYPYTLNLVVDEK 180 (277) Q Consensus 101 kAElErqR~EIElL~L~~a~L~Eq~g~L~L~~kkgkK~~vl~~~pl~l~k~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (277) .+.++..+. . .... ......++..-..+..+ .....+ T Consensus 57 ~~~~~~~~~---~--------~~~~---~~~~~~~~~~~~~~~~~-----------------------------~~~~~~ 93 (389) T protein:vir:10 57 IKALEAEKP---A--------EPKT---EPKDDGSKKGTDLSKKP-----------------------------IDAKKK 93 (389) T ss_pred HHHHHHHHH---h--------hhhc---cccccccccccccchhH-----------------------------HHHHHH Confidence 111110000 0 0000 00000000000000000 000000 Q ss_pred HHHHHHhhccchHHHHHHHHHHHHHHHHhhcCChhHHHHHHHHHHHhHHHHHHhhccchhhHHHHhhhhh--------cc Q lcl|Aclame:pro 181 IRQLTLKTLNAPQIIHSVIKTKFFEALAKVGAGPDLMMLIIGVIMGVGIGVAIGFGIANANLTHLLSQHV--------AN 252 (277) Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~ 252 (277) .-.-.+++-+ ..-++++- +...| -|..|-.=++ ..+-+++.+.. .+ T Consensus 94 ~~~~~lr~~~-----------~~~~~~~~-~t~~~-------------gg~~vP~~~~-~~i~~~~~~~~~l~~~~~~~~ 147 (389) T protein:vir:10 94 AINDFIHSHG-----------KVIDATSK-VTSTE-------------AGVLIPEEII-YDPTAEVNSVVDLSTLVTKTP 147 (389) T ss_pred HHHHHhhcch-----------hhhhhhcc-cccCC-------------cceeehHHHH-HHHHHHHHhhhhHHhhcceee Confidence 0000000000 00011111 11111 0111111111 11222222211 00 Q ss_pred cc--ccccccceeeccce-------ecCCCCC-C-C Q lcl|Aclame:pro 253 TT--TTHLATTTTTTTPF-------TIPSNNT-K-G 277 (277) Q Consensus 253 ~~--~~~~~~~~~~~~~~-------~~~~~~~-~-~ 277 (277) ++ +...+.-+.+++++ ++|.... + + T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~ 183 (389) T protein:vir:10 148 VTTPKGTYPILKRATDRFSSVAELAENPKLAEPEFN 183 (389) T ss_pred ccCCeeEEEEEecCCCccccccccccccccccccce Confidence 00 00000000011110 1221100 0 0 No 33 >protein:vir:104437 Length: 714 # NCBI annotation: putative phage portal protein # Family: family:all:487 # MgeID: mge:1471 # MgeName: 86 # Cross-refs: genbank:acc:YP_794061;genbank:gi:116222006;genbank:GeneID:4397502 Probab=48.10 E-value=0.68 Score=21.50 Aligned_cols=111 Identities=11% Similarity=0.027 Sum_probs=19.7 Q ss_pred CCchhHHHHHHH--------------HHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHH Q lcl|Aclame:pro 1 MSTDGKLVSVYE--------------EKIRNAKSLEELKQVWDEVQLQVADHKTQKRLWKAKEK--REFELKYQEFEKLK 64 (277) Q Consensus 1 mstd~KL~avyE--------------Ee~kka~kleELkQK~EEaeKQiad~k~ekK~E~ErQK--aEiE~QRaEiEkqK 64 (277) +.--.+|.+..- |+....+...+++++..+++-+-..++. ++.+.+-.+ +.......+..... T Consensus 585 ~p~~~ei~~~ir~~~~~~~~~~~~~~e~q~~q~~~~~~~~~q~~l~~~e~~a~~-~k~eaea~~~~aqa~~~~~~a~~~~ 663 (714) T protein:vir:10 585 VPQKQEFVERIRAALGTPKSPDEMTPEEQEVAAQQQALQQQQAELQMREMAGRV-AKLEADAARAHAAAQRDNASAQREV 663 (714) T ss_pred CcCHHHHHHHHHHHcCCCCCccccCcchhHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHH Confidence 111111111110 0000111111111111111111011110 111111111 11111111111111 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHhhHHHHHHHHH Q lcl|Aclame:pro 65 AELSQKKKKVKKERVDVKVKITKK---WINSRLFTAEHYIAMLQQSKDGLQLLFL 116 (277) Q Consensus 65 AEiErqKkEiEkqkaEiE~k~qKk---EiEsQkaEAErqkAElErqR~EIElL~L 116 (277) +..+.++.. ......+...+.+ -.++... -.++..++...+.++.|-| T Consensus 664 ~~~~~q~~~--~~~~~a~~a~~l~~~~~~~q~~~--~~~q~~~q~~~~~~~~~~~ 714 (714) T protein:vir:10 664 ALTQGQRYV--DALNQAHTAEIITGVQNMEQEQD--VLQQQMLYTLQQRMNEMSL 714 (714) T ss_pred HHHHHHHHH--HHHHHHHHHHHHHHHHhhhhhHH--HHHHHHHHHHHHHHHhcCC Confidence 111111111 1111111111111 1111111 1122234444444444433 No 34 >protein:vir:4953 Length: 397 # NCBI annotation: major head protein # Family: family:all:21 # MgeID: mge:108 # MgeName: Sfi19 # Cross-refs: genbank:acc:NP_049929;genbank:gi:9632900;genbank:GeneID:1262076 Probab=48.04 E-value=0.68 Score=21.49 Aligned_cols=164 Identities=17% Similarity=0.194 Sum_probs=33.6 Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 18 AKSLEELKQVWDEVQLQVADHKTQKRLWKAKEKREFELKYQEFEKLKAELSQKKKKVKKERVDVKVKITKKWINSRLFTA 97 (277) Q Consensus 18 a~kleELkQK~EEaeKQiad~k~ekK~E~ErQKaEiE~QRaEiEkqKAEiErqKkEiEkqkaEiE~k~qKkEiEsQkaEA 97 (277) |+.++||++..++...++.++..+ .+.....-+....|++..+++++..+.+.+.+...++ ...... T Consensus 1 Mk~~~el~~~~~~~~~~~~~l~~~----~~~~~~~~~~~~ee~~~~~~~i~~~~~~~e~~~~~~~---------~~~~~~ 67 (397) T protein:vir:49 1 MKTSNELHDLWVAQGDKVENLNEK----LNVAMLDDSVSAEELQAIKNERDTAKMKRDMFKEQYT---------EARANE 67 (397) T ss_pred CchHHHHHHHHHHHHHHHHHHHHH----HHHHHhhhhcCHHHHHHHHHHHHHHHHHHHHHHHHHH---------HHHHHh Confidence 888888888777777666543211 1110011111112233333333322222111111110 000000 Q ss_pred HHHHHHHHhhHHHHHHHHHHHHHHHHHcCeeeeeeccceeeEEEcCcceeeecccCCcchheeeeeeecCCCceeechhh Q lcl|Aclame:pro 98 EHYIAMLQQSKDGLQLLFLRRAKLVENQGYLMLEVKKMKKVWVLNGEPLLLEKNKFPFGKKFVAVWFTLPDYPYTLNLVV 177 (277) Q Consensus 98 ErqkAElErqR~EIElL~L~~a~L~Eq~g~L~L~~kkgkK~~vl~~~pl~l~k~k~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (277) . +... .. +..++.-. T Consensus 68 ~--------------------~~~~-~~----------------~~~~~~~~---------------------------- 82 (397) T protein:vir:49 68 V--------------------ANMS-EE----------------EKKPLTKS---------------------------- 82 (397) T ss_pred h--------------------hccc-cc----------------cccccccc---------------------------- Confidence 0 0000 00 00000000 Q ss_pred hhHHHHHHHhhccchHHHHHHHHHHHHHHHHhhcCChhHHHHHHHHHHHhHHHHHHhhccchhhHHHHhh------hhh- Q lcl|Aclame:pro 178 DEKIRQLTLKTLNAPQIIHSVIKTKFFEALAKVGAGPDLMMLIIGVIMGVGIGVAIGFGIANANLTHLLS------QHV- 250 (277) Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~- 250 (277) +...+..-.+. +...+++.+-++++....|.+ .+-|..|.--+++ .+-+++. +.+ T Consensus 83 ~~~~~~~~~~~------~~~~l~~~~~~~~~~~~~~t~-----------~~gg~~vP~~~~~-~ii~~~~~~~~l~~~~~ 144 (397) T protein:vir:49 83 EEEVKAGFVKD------FKNLVRGRYQNLLDSKTDASG-----------SDAGLTIPQDIQT-AIHTLVSQYDSLQEYVN 144 (397) T ss_pred hhHHHHHHHHH------HHHHHhcchhHHHHHhhcccc-----------ccCcccccHhHHH-HHHHHHHhhhhHHhhhc Confidence 00000000000 011112222222221111110 0011111111111 0111111 111 Q ss_pred --cccccc---ccc--cceeeccc-----eecCCC-C-CCC Q lcl|Aclame:pro 251 --ANTTTT---HLA--TTTTTTTP-----FTIPSN-N-TKG 277 (277) Q Consensus 251 --~~~~~~---~~~--~~~~~~~~-----~~~~~~-~-~~~ 277 (277) ..++.. +-+ ++...... =++|+. + +-+ T Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~a~~v~E~~~~~~~~~~~~~ 185 (397) T protein:vir:49 145 VENVTTLTGSRVYEKWTDITGLANIDDEAGKIADVDDPKLS 185 (397) T ss_pred eeecccCccceEEEeeccCCcceeeecCcccccccccccee Confidence 000000 000 00000000 011210 0 000 No 35 >protein:vir:93881 Length: 387 # NCBI annotation: ORF011 # Family: family:all:658 # MgeID: mge:1485 # MgeName: 3A # Cross-refs: genbank:acc:YP_239938;genbank:gi:66395599;genbank:GeneID:5130947 Probab=47.92 E-value=0.69 Score=21.48 Aligned_cols=237 Identities=13% Similarity=0.086 Sum_probs=54.0 Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHH--HHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------- Q lcl|Aclame:pro 18 AKSLEELKQVWDEVQLQVADHKTQK--RLW-KAKEKREFELKYQEFEKLKAELSQKKKKVKKERVDVKVKIT-------- 86 (277) Q Consensus 18 a~kleELkQK~EEaeKQiad~k~ek--K~E-~ErQKaEiE~QRaEiEkqKAEiErqKkEiEkqkaEiE~k~q-------- 86 (277) |++++|++++..|+..++.+...+- +.. .+..-.+++....+++.+++++++-+.++++...+.+.+.. T Consensus 1 Mk~l~el~~~~~e~~~~~~~~~~~~~~~~~~~~~~~ee~~~~~~~~~~l~~~~~~l~~~~~~~e~~~~~~~~~~~~~~~~ 80 (387) T protein:vir:93 1 MPTLYELKQSLGMIGQQLKNKNDELSQKATDPNIDMEDIKQLETEKAGLQQRFNIVERQVKDIEEKEKAKVKDTGEAYQS 80 (387) T ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCCC Confidence 5555555555554444443332220 110 11111223333333333333333322222221111110000 Q ss_pred -HHHHHHHHHHHHHHHHHH---------HhhHHHH----------------HHHHHHHHHHHHHcCee----eeee---- Q lcl|Aclame:pro 87 -KKWINSRLFTAEHYIAML---------QQSKDGL----------------QLLFLRRAKLVENQGYL----MLEV---- 132 (277) Q Consensus 87 -KkEiEsQkaEAErqkAEl---------ErqR~EI----------------ElL~L~~a~L~Eq~g~L----~L~~---- 132 (277) ..+.+.....++-..+.. ...+.+. +.+.-+..++..+.+.| -... T Consensus 81 ~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~al~~~t~s~gG~~IP~~~~~~Ii~~~~~~~~l~~~~~v~~~~~~ 160 (387) T protein:vir:93 81 LNDHEKMVKAKAEFYRHAILPNEFEKPSMEAQRLLHALPTGNDSGGDKLLPKTLSKEIVSEPFAKNQLREKARLTNIKGL 160 (387) T ss_pred cchhhHHHHHHHHHHHHHhhhhhhhhhhhhhHHHHHhhccCcCCCCceeechhHHHHHHHHHHhhchhhhheeeeecCCc Confidence 000000000000000000 0000000 00000111111111111 0000 Q ss_pred -------ccceeeEEEcCcceeeecccCCcchheeeeeeecCCCceeechhhhhHHHHHHHhhccchHHHHHHHHHHHHH Q lcl|Aclame:pro 133 -------KKMKKVWVLNGEPLLLEKNKFPFGKKFVAVWFTLPDYPYTLNLVVDEKIRQLTLKTLNAPQIIHSVIKTKFFE 205 (277) Q Consensus 133 -------kkgkK~~vl~~~pl~l~k~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (277) ....-+|+=.|+.. ..++.-|+. | ++.-|-|..-+.+...+-+ .| ++. +-+.|...+-+ T Consensus 161 ~~p~~~~~~~~a~~v~E~~~~--~~~~~~f~~----v--~~~~~k~~~~~~iS~ell~---Ds--~~~-l~~~i~~~la~ 226 (387) T protein:vir:93 161 EIPRVSYTLDDDDFITDVETA--KELKLKGDT----V--KFTTNKFKVFAAISDTVIH---GS--DVD-LVNWVENALQS 226 (387) T ss_pred eEEEEeecCCccccccCcccc--cccccccce----e--eeeheeeeeechhhHHHHh---hh--HHH-HHHHHHHHHHH Confidence 00111122111111 111111111 1 2222333333444433221 11 111 34666666666 Q ss_pred HHHhhcCChhHHHHHHHHHHHhHHHHHHhhccch-------------hhHH---HHhhhhh-------ccccc-cc-ccc Q lcl|Aclame:pro 206 ALAKVGAGPDLMMLIIGVIMGVGIGVAIGFGIAN-------------ANLT---HLLSQHV-------ANTTT-TH-LAT 260 (277) Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~---~~~~~~~-------~~~~~-~~-~~~ 260 (277) ++++- - .+.+.|.|-|.....|+.. .++. |-|.+.. .|..+ .. ..+ T Consensus 227 ~~~~~---e------~~~~~~~g~g~g~p~g~l~~~~~~~v~~~~~~d~i~~~~~~l~~~~~~~a~~~mn~~t~~~~~~~ 297 (387) T protein:vir:93 227 GLAAK---E------RKDALAVSPKSGLDHMSFYNGSVKEVEGADMYDAIINALADLHEDYRDNATIYMRYADYVKIISV 297 (387) T ss_pred HHHHH---H------HHhHhhcCCCccccceeeeccccccccccchHHHHHHHHhccChhhhcCCEEEEechHHHHHHHH Confidence 66543 0 1112222222222222211 0111 1111110 11100 00 001 Q ss_pred ceeeccceecC-CCCCCC Q lcl|Aclame:pro 261 TTTTTTPFTIP-SNNTKG 277 (277) Q Consensus 261 ~~~~~~~~~~~-~~~~~~ 277 (277) -+....++..+ .++--| T Consensus 298 ~~d~~~~~~~~~~~~llG 315 (387) T protein:vir:93 298 LSNGTTNFFDTPAEKVFG 315 (387) T ss_pred HhcCCCcccccCCccccc Confidence 11111111111 111112 No 36 >protein:vir:9704 Length: 394 # NCBI annotation: hypothetical protein # Family: family:all:21 # MgeID: mge:174 # MgeName: 315.2 # Cross-refs: genbank:acc:NP_795466;genbank:gi:28876225;genbank:GeneID:1257769 Probab=44.69 E-value=0.8 Score=21.12 Aligned_cols=179 Identities=14% Similarity=0.057 Sum_probs=34.8 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHcCe Q lcl|Aclame:pro 48 KEKREFELKYQEFEKLKAELSQKKKKVKKERVDVKVKITKKWINSRLFTAEHYIAMLQQSKDGLQLLFLRRAKLVENQGY 127 (277) Q Consensus 48 rQKaEiE~QRaEiEkqKAEiErqKkEiEkqkaEiE~k~qKkEiEsQkaEAErqkAElErqR~EIElL~L~~a~L~Eq~g~ 127 (277) ..+.+|+..+++++.++.+++...++.++...+- ...++++..++++.+.+++++..++++.+. +..+.+ +. T Consensus 1 M~~~~l~el~~~l~e~~~~i~~~~~e~~~~~~~~----~~~~~~~l~~eie~l~~ei~~l~~~~~~~e---~~~e~~-~~ 72 (394) T protein:vir:97 1 MFEEKIKEIKATIADLNNTIVTKTAQVKNALESD----DLEAARSIKAEVEQAKANLVEAENDLKLYE---SSVEVG-GA 72 (394) T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhchh----hHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHhhhh-cc Confidence 2222233233333333333333222222111110 011122222223333333333222222221 111111 00 Q ss_pred eeeeeccceeeEEEcCcceeeecccCCcchheeeeeeecCCCceeechhhhhHHHHHHHhhccchHHHHHH-HHHHHHHH Q lcl|Aclame:pro 128 LMLEVKKMKKVWVLNGEPLLLEKNKFPFGKKFVAVWFTLPDYPYTLNLVVDEKIRQLTLKTLNAPQIIHSV-IKTKFFEA 206 (277) Q Consensus 128 L~L~~kkgkK~~vl~~~pl~l~k~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 206 (277) --.++.+.. +..+ ++.. .+++-++ +.+. ..+.. -.-.+.+. T Consensus 73 -----------~~~~~~~~~-~~~~---------------~~~~----~~~~~~~-----~~~~--~~~~~~~~~~~~~~ 114 (394) T protein:vir:97 73 -----------ENIGGKEVT-QEEK---------------TYRE----SVNDFIR-----SKGK--IVNDSLRFEGKDEV 114 (394) T ss_pred -----------ccccccccc-hhhH---------------HHHH----HHHHHHH-----HHHH--HhhhhhhhhhHHHH Confidence 000111100 0000 0000 0011111 0000 00000 00011111 Q ss_pred HHhhcCChhHHHHHHHHHHHhHHHHHHhhccchhhHHHHhhhhhccccccccc-cceeeccceecCCCCCCC Q lcl|Aclame:pro 207 LAKVGAGPDLMMLIIGVIMGVGIGVAIGFGIANANLTHLLSQHVANTTTTHLA-TTTTTTTPFTIPSNNTKG 277 (277) Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 277 (277) ++....+....-...| +-+.+-|..|-=-+++ .+-+++.+.. .-.... .-++++..+++|-....+ T Consensus 115 ~~~~~~~~~~~~~~~~-~t~~~gg~liP~~~~~-~ii~~~~~~~---~l~~~~~~~~~~~~~~~~~~~~~~~ 181 (394) T protein:vir:97 115 LMPINETTPVEPQKDG-IKKENAKPVSSEEILY-TPAREVKTVV---DLKPFTTVYQAKKASGKYPVLQRAT 181 (394) T ss_pred HHHHHhhhhhhhhccc-cccccccccChHHHHH-HHHHHhhhhh---hhhhhceeeeccCcceEEEEEecCC Confidence 1111000000000000 0011111111111111 2344444331 111111 111222334444322222 No 37 >protein:vir:1886 Length: 385 # NCBI annotation: major capsid subunit precursor # Family: family:all:585 # MgeID: mge:41 # MgeName: HK022 # Cross-refs: genbank:acc:NP_037666;genbank:gi:9634124;genbank:GeneID:1262513 Probab=43.89 E-value=0.83 Score=21.04 Aligned_cols=180 Identities=14% Similarity=0.020 Sum_probs=32.9 Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HHHH Q lcl|Aclame:pro 18 AKSLEELKQVWDEVQLQVADHKTQKRLWKAKEKREFELKYQEFEKLKAELSQKKKKVKKERVDVKVKITKK-----WINS 92 (277) Q Consensus 18 a~kleELkQK~EEaeKQiad~k~ekK~E~ErQKaEiE~QRaEiEkqKAEiErqKkEiEkqkaEiE~k~qKk-----EiEs 92 (277) |.++.+|++++++..++..+.....+. |++.-..+.+.+++++.+..+++++....++...++. .... T Consensus 1 M~~l~el~~~~~~~~~e~~~l~~~~~~-------e~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 73 (385) T protein:vir:18 1 MSELALIQKAIEESQQKMTQLFDAQKA-------EIESTGQVSKQLQSDLMKVQEELTKSGTRLFDLEQKLASGAENPGE 73 (385) T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccch Confidence 555566666666555544433222222 2222222222222222222222222211111000000 0000 Q ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHcCeeeeeeccceeeEEEcCcceeeecccCCcchheeeeeeecCCCcee Q lcl|Aclame:pro 93 RLFTAEHYIAMLQQSKDGLQLLFLRRAKLVENQGYLMLEVKKMKKVWVLNGEPLLLEKNKFPFGKKFVAVWFTLPDYPYT 172 (277) Q Consensus 93 QkaEAErqkAElErqR~EIElL~L~~a~L~Eq~g~L~L~~kkgkK~~vl~~~pl~l~k~k~~~~~~~~~~~~~~~~~~~~ 172 (277) .+...++..++..+...... ..+. T Consensus 74 ~~~~~~~~~~~~~~~~~~~~-----------~~~~--------------------------------------------- 97 (385) T protein:vir:18 74 KKSFSERAAEELIKSWDGKQ-----------GTFG--------------------------------------------- 97 (385) T ss_pred hhhhHHHHHHHHHHHHHHhh-----------ccch--------------------------------------------- Confidence 00000000000000000000 0000 Q ss_pred echhhhhHHHHHHHhhccchHHHHHHHHHHHHHHHHhhcCChhHHHHHHHHHHHhHHH-HHH--hhccchhhHHHHhhhh Q lcl|Aclame:pro 173 LNLVVDEKIRQLTLKTLNAPQIIHSVIKTKFFEALAKVGAGPDLMMLIIGVIMGVGIG-VAI--GFGIANANLTHLLSQH 249 (277) Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~~~~~~ 249 (277) ..+..+.+...+-++..+|..-+-+.+++.+...+. +.-++--+-|+-+-+ ..+ +++.+ +.. T Consensus 98 ----~~~~~~~~~~~~~~~g~~i~~~~~~~ii~~~~~~~~---l~~~~~~~~~~~~~~~~~~~~~~~~~--------a~~ 162 (385) T protein:vir:18 98 ----AKTFNKSLGSDADSAGSLIQPMQIPGIIMPGLRRLT---IRDLLAQGRTSSNALEYVREEVFTNN--------ADV 162 (385) T ss_pred ----hhHHHhhhccccccCCceecchhhhHHHHHhhhccc---hhhhcceecccCcceEEEEEecCCcc--------eee Confidence 000000000000000000000111122222211110 000000000110000 000 00000 001 Q ss_pred hccccccccccceeeccceecCCCCCCC Q lcl|Aclame:pro 250 VANTTTTHLATTTTTTTPFTIPSNNTKG 277 (277) Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (277) |+-.++. |+++.+..+.++....--+ T Consensus 163 v~E~~~~--~~~~~~~~~~~~~~~k~~~ 188 (385) T protein:vir:18 163 VAEKALK--PESDITFSKQTANVKTIAH 188 (385) T ss_pred eccCccc--cccccceeEEEEeeeeEEE Confidence 1111111 1111111222222111111 No 38 >protein:vir:191 Length: 385 # NCBI annotation: major head subunit precursor # Family: family:all:585 # MgeID: mge:6 # MgeName: HK97 # Cross-refs: genbank:acc:NP_037701;genbank:gi:9634158;genbank:GeneID:1262530 Probab=43.89 E-value=0.83 Score=21.04 Aligned_cols=180 Identities=14% Similarity=0.020 Sum_probs=32.9 Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HHHH Q lcl|Aclame:pro 18 AKSLEELKQVWDEVQLQVADHKTQKRLWKAKEKREFELKYQEFEKLKAELSQKKKKVKKERVDVKVKITKK-----WINS 92 (277) Q Consensus 18 a~kleELkQK~EEaeKQiad~k~ekK~E~ErQKaEiE~QRaEiEkqKAEiErqKkEiEkqkaEiE~k~qKk-----EiEs 92 (277) |.++.+|++++++..++..+.....+. |++.-..+.+.+++++.+..+++++....++...++. .... T Consensus 1 M~~l~el~~~~~~~~~e~~~l~~~~~~-------e~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 73 (385) T protein:vir:19 1 MSELALIQKAIEESQQKMTQLFDAQKA-------EIESTGQVSKQLQSDLMKVQEELTKSGTRLFDLEQKLASGAENPGE 73 (385) T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccch Confidence 555566666666555544433222222 2222222222222222222222222211111000000 0000 Q ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHcCeeeeeeccceeeEEEcCcceeeecccCCcchheeeeeeecCCCcee Q lcl|Aclame:pro 93 RLFTAEHYIAMLQQSKDGLQLLFLRRAKLVENQGYLMLEVKKMKKVWVLNGEPLLLEKNKFPFGKKFVAVWFTLPDYPYT 172 (277) Q Consensus 93 QkaEAErqkAElErqR~EIElL~L~~a~L~Eq~g~L~L~~kkgkK~~vl~~~pl~l~k~k~~~~~~~~~~~~~~~~~~~~ 172 (277) .+...++..++..+...... ..+. T Consensus 74 ~~~~~~~~~~~~~~~~~~~~-----------~~~~--------------------------------------------- 97 (385) T protein:vir:19 74 KKSFSERAAEELIKSWDGKQ-----------GTFG--------------------------------------------- 97 (385) T ss_pred hhhhHHHHHHHHHHHHHHhh-----------ccch--------------------------------------------- Confidence 00000000000000000000 0000 Q ss_pred echhhhhHHHHHHHhhccchHHHHHHHHHHHHHHHHhhcCChhHHHHHHHHHHHhHHH-HHH--hhccchhhHHHHhhhh Q lcl|Aclame:pro 173 LNLVVDEKIRQLTLKTLNAPQIIHSVIKTKFFEALAKVGAGPDLMMLIIGVIMGVGIG-VAI--GFGIANANLTHLLSQH 249 (277) Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~~~~~~ 249 (277) ..+..+.+...+-++..+|..-+-+.+++.+...+. +.-++--+-|+-+-+ ..+ +++.+ +.. T Consensus 98 ----~~~~~~~~~~~~~~~g~~i~~~~~~~ii~~~~~~~~---l~~~~~~~~~~~~~~~~~~~~~~~~~--------a~~ 162 (385) T protein:vir:19 98 ----AKTFNKSLGSDADSAGSLIQPMQIPGIIMPGLRRLT---IRDLLAQGRTSSNALEYVREEVFTNN--------ADV 162 (385) T ss_pred ----hhHHHhhhccccccCCceecchhhhHHHHHhhhccc---hhhhcceecccCcceEEEEEecCCcc--------eee Confidence 000000000000000000000111122222211110 000000000110000 000 00000 001 Q ss_pred hccccccccccceeeccceecCCCCCCC Q lcl|Aclame:pro 250 VANTTTTHLATTTTTTTPFTIPSNNTKG 277 (277) Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (277) |+-.++. |+++.+..+.++....--+ T Consensus 163 v~E~~~~--~~~~~~~~~~~~~~~k~~~ 188 (385) T protein:vir:19 163 VAEKALK--PESDITFSKQTANVKTIAH 188 (385) T ss_pred eccCccc--cccccceeEEEEeeeeEEE Confidence 1111111 1111111222222111111 No 39 >protein:vir:105520 Length: 706 # NCBI annotation: phage portal protein # Family: family:all:487 # MgeID: mge:1463 # MgeName: phiSG1 # Cross-refs: genbank:acc:YP_516189;genbank:gi:89885992;genbank:GeneID:3964380 Probab=43.77 E-value=0.83 Score=21.02 Aligned_cols=116 Identities=2% Similarity=-0.091 Sum_probs=25.2 Q ss_pred CCchhHHHHHHHH--------------HHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 1 MSTDGKLVSVYEE--------------KIRNAKSLEELKQVWDEVQLQVADHKTQKRLWKAKEKREFELKYQEFEKLKAE 66 (277) Q Consensus 1 mstd~KL~avyEE--------------e~kka~kleELkQK~EEaeKQiad~k~ekK~E~ErQKaEiE~QRaEiEkqKAE 66 (277) +.--.+|.+.... +...+++..++++ .+...+..++ +...++.+.+.++++.+....+ T Consensus 573 ~p~~~e~~e~irk~~~~q~~~~~~~~~eq~~~~q~qq~q~--~q~~~~~~~~------~aq~~~~qA~~~k~~a~~~q~~ 644 (706) T protein:vir:10 573 GEGLDDFKAFNRRQLLTQGIVKPRNQQEQAIVQQAQQAQA--TQPDPNMLLA------QAQMVVAQAEAQKSQNETVQTQ 644 (706) T ss_pred ccchHHHHHHHHHhhcccCCccccchhHHHHHHHHHHHHH--HHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHH Confidence 2222333322211 1111111111111 1111111111 1111222223333333333333 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHcCeeeee Q lcl|Aclame:pro 67 LSQKKKKVKKERVDVKVKITKKWI----NSRLFTAEHYIAMLQQSKDGLQLLFLRRAKLVENQGYLMLE 131 (277) Q Consensus 67 iErqKkEiEkqkaEiE~k~qKkEi----EsQkaEAErqkAElErqR~EIElL~L~~a~L~Eq~g~L~L~ 131 (277) ++..+++.+.+.+......+-... .++..++ .+ -.+++...+...+.-+-+.-.++-+ T Consensus 645 ~~a~~a~~qa~~~~~~~~~~~~~a~~~~~~~~~q~--~q-----~l~~~~a~q~~~~~~~~~~~~~~~~ 706 (706) T protein:vir:10 645 IKAFTAQQDAMESQANTVYKLAQARNIDDKAVMET--LR-----LLKEVAASQQQTIPSPPSPADIVPS 706 (706) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HH-----HHHHHHHhccCCCCCCCCCcccCCC Confidence 333333333333323211111100 0111111 11 1111111111112222222222222 No 40 >protein:vir:172 Length: 708 # NCBI annotation: portal protein # Family: family:all:487 # MgeID: mge:5 # MgeName: HK620 # Cross-refs: genbank:acc:NP_112077;genbank:gi:13559867;genbank:GeneID:920970 Probab=43.14 E-value=0.86 Score=20.95 Aligned_cols=136 Identities=14% Similarity=0.045 Sum_probs=20.2 Q ss_pred CCchhHHHHHHHHHHHHhh-hHHHHHHHHHHHHHHHHHHH-HH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 1 MSTDGKLVSVYEEKIRNAK-SLEELKQVWDEVQLQVADHK-TQ-KRLWKAKEKREFELKYQEFEKLKAELSQKKKKVKKE 77 (277) Q Consensus 1 mstd~KL~avyEEe~kka~-kleELkQK~EEaeKQiad~k-~e-kK~E~ErQKaEiE~QRaEiEkqKAEiErqKkEiEkq 77 (277) ...|..-+...-|..++.. .....++...+.+.+..+++ .+ ++...+.+.++.+..+.+.|..+++.+..+.+.+.. T Consensus 570 ~~~D~p~~~ei~e~ir~~~~~~~~~~~~~~e~~q~~~q~qq~~q~q~~~~~~eaqa~~~~~qAe~~ka~aea~~~q~~a~ 649 (708) T protein:vir:17 570 DNIDGEGLDDFKEYNRNQLLISGIAKPRNEKEQQIVQQAQMAAQSQPNPEMVLAQAQMVAAQAEAQKATNETAQTQIKAF 649 (708) T ss_pred HhcCCCChHHHHHHHHHHhhccccccCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Confidence 1111111111111111110 00011111111111110000 00 011111111111111111222222222222222221 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHcCeeeeeeccceeeEEEcCcceeeecccCCc Q lcl|Aclame:pro 78 RVDVKVKITKKWINSRLFTAEHYIAMLQQSKDGLQLLFLRRAKLVENQGYLMLEVKKMKKVWVLNGEPLLLEKNKFPF 155 (277) Q Consensus 78 kaEiE~k~qKkEiEsQkaEAErqkAElErqR~EIElL~L~~a~L~Eq~g~L~L~~kkgkK~~vl~~~pl~l~k~k~~~ 155 (277) +++.+.+...+..-+-.+ ....+....+++..+.|. .....-+++ .-+-| ...+.--|- T Consensus 650 q~~~~~~~a~~~a~q~~~--q~~~~~~~~~~~~~~~l~-~~q~~q~q~---------------~~a~p-~~~~~~~~~ 708 (708) T protein:vir:17 650 TAQQDAMESQANTVYKLA--QARNIDDKAVMEAIRLLK-DVAESQQQQ---------------FQSPP-QSPADLMPS 708 (708) T ss_pred HHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHhh-hhhhhHHHH---------------Hhccc-cCchhccCC Confidence 211111111111100000 000111111122222221 111122221 00111 111111111 No 41 >protein:vir:100920 Length: 725 # NCBI annotation: Gp1 # Family: family:all:487 # MgeID: mge:1509 # MgeName: ST104 # Cross-refs: genbank:acc:YP_006406;genbank:gi:46358698;genbank:GeneID:2777070 Probab=42.24 E-value=0.89 Score=20.85 Aligned_cols=134 Identities=10% Similarity=-0.005 Sum_probs=30.1 Q ss_pred CCchhHHHHHH--------------HH---HHHHhhhHHHHHHHHHHHHHH--HHHHHHH---HHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 1 MSTDGKLVSVY--------------EE---KIRNAKSLEELKQVWDEVQLQ--VADHKTQ---KRLWKAKEKREFELKYQ 58 (277) Q Consensus 1 mstd~KL~avy--------------EE---e~kka~kleELkQK~EEaeKQ--iad~k~e---kK~E~ErQKaEiE~QRa 58 (277) ...-.++.... .+ +...+++.++.++..+-.+++ +..++.+ .+.|+.+..++.+...+ T Consensus 562 ~~~~~e~~erirkq~~~~~~~~~~~~e~~q~~~e~qq~~~~q~~~e~~q~~~~~~~~qae~~ka~aE~~k~~~~a~~~~~ 641 (725) T protein:vir:10 562 GKGVEMMRDYANKQLIQMGVKKPETPEEQQWLVEAQQAKQGQQDPAMVQAQGVLLQGQAELAKAQNQTLSLQIDAAKVEA 641 (725) T ss_pred chhHHHHHHHHHhhhhhhccCCccccchhHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Confidence 11111111100 11 111122222211111111111 1111111 12222222222322222 Q ss_pred HHHHHHHHHHHHHHHHH-HHHHHHH------HHHHHHHHHHHHHHHHH-HHHHHHhhHHHHHHHHHHHHHHHHHcCeeee Q lcl|Aclame:pro 59 EFEKLKAELSQKKKKVK-KERVDVK------VKITKKWINSRLFTAEH-YIAMLQQSKDGLQLLFLRRAKLVENQGYLML 130 (277) Q Consensus 59 EiEkqKAEiErqKkEiE-kqkaEiE------~k~qKkEiEsQkaEAEr-qkAElErqR~EIElL~L~~a~L~Eq~g~L~L 130 (277) +.+...++......+.. .++++++ .+.+++..++-++++|. ++++.++++++.+. ..-|.. T Consensus 642 ~a~~~a~~~~~~~~q~~~~q~~~~~~~~~~~~~~q~~~~~~~~~~ae~~~~~~~~~~~~~~~~-----------~~~~~~ 710 (725) T protein:vir:10 642 QNQLNAARIAEIFNNMDLSKQSEFREFLKTVASFQQDRSEDARANAELLLKGNEQTHKQRMDI-----------ANILQS 710 (725) T ss_pred HHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhh-----------hhcccc Confidence 22222222111111111 1122221 11222333333334442 22222222222222 122221 Q ss_pred eeccceeeEEEcCcce Q lcl|Aclame:pro 131 EVKKMKKVWVLNGEPL 146 (277) Q Consensus 131 ~~kkgkK~~vl~~~pl 146 (277) .. +=..+.-...+|- T Consensus 711 q~-~~~~~~~~~~~~~ 725 (725) T protein:vir:10 711 QR-QNQPSGSVAETPQ 725 (725) T ss_pred cc-ccCCCcccccCCC Confidence 11 2222332333333 No 42 >protein:vir:3845 Length: 395 # NCBI annotation: major head protein # Family: family:all:21 # MgeID: mge:322 # MgeName: phi adh # Cross-refs: genbank:acc:NP_050151;swissprot:trembl:q9t1f6;genbank:gi:9633043;uniprot:Q9T1F6;genbank:GeneID:1262163 Probab=41.60 E-value=0.92 Score=20.78 Aligned_cols=159 Identities=15% Similarity=0.198 Sum_probs=27.9 Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 19 KSLEELKQVWDEVQLQVADHKTQKRLWKAKEKREFELKYQEFEKLKAELSQKKKKVKKERVDVKVKITKKWINSRLFTAE 98 (277) Q Consensus 19 ~kleELkQK~EEaeKQiad~k~ekK~E~ErQKaEiE~QRaEiEkqKAEiErqKkEiEkqkaEiE~k~qKkEiEsQkaEAE 98 (277) =.+++|+++++++..++.++..+ ...++.+....+.+...+|+++.+++++..++..+..+. + T Consensus 1 M~~~eL~~~~~~~~~~~~~l~e~------~~~~~~~~~~~~~~~~~ee~~~l~~~i~~~~~~~~~~~~------~----- 63 (395) T protein:vir:38 1 MNINQLKDAFDMAGQKVQDLEDK------RAQFAIDLGNDASSHSVDDINKLNASLKNAKMAQELAKS------A----- 63 (395) T ss_pred CCHHHHHHHHHHHHHHHHHHHHH------HHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH------H----- Confidence 23344555444444333332211 111111111111111112222222222211111110000 0 Q ss_pred HHHHHHHhhHHHHHHHHHHHHHHHHHcCeeeeeeccceeeEEEcCcceeeecccCCcchheeeeeeecCCCceeechhhh Q lcl|Aclame:pro 99 HYIAMLQQSKDGLQLLFLRRAKLVENQGYLMLEVKKMKKVWVLNGEPLLLEKNKFPFGKKFVAVWFTLPDYPYTLNLVVD 178 (277) Q Consensus 99 rqkAElErqR~EIElL~L~~a~L~Eq~g~L~L~~kkgkK~~vl~~~pl~l~k~k~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (277) .+..+..... ..+.- .+.++ . + T Consensus 64 -----~~~~~~~~~~---------------------~~~~~--~~~~~------~------------------------~ 85 (395) T protein:vir:38 64 -----YEDARANLNA---------------------EPVNK--KPLPV------K------------------------D 85 (395) T ss_pred -----HHHHHhhhhh---------------------ccccc--cccch------h------------------------h Confidence 0000000000 00000 00000 0 0 Q ss_pred hHHHHHHHhhccchHHHHHHHHHHHHHHHHhhcCChhHHHHHHHHHHHhHH-HHHHhhccchhhHHHHhhhh--hccccc Q lcl|Aclame:pro 179 EKIRQLTLKTLNAPQIIHSVIKTKFFEALAKVGAGPDLMMLIIGVIMGVGI-GVAIGFGIANANLTHLLSQH--VANTTT 255 (277) Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~--~~~~~~ 255 (277) .... +..+...++ +.+....+.++. +.|- |..|---+++ .+-.++.+. +-.--+ T Consensus 86 ~~~~--------~~~~~~~~~--~~~~~~~~~~~~------------~~~~gg~~vP~~~~~-~ii~~~~~~~~l~~~~~ 142 (395) T protein:vir:38 86 GKPD--------AQAMKNQFV--KDFKNLVTSGTT------------GTGNAGLTIPEDIQL-QIRTLTRSFTSLESLAN 142 (395) T ss_pred hhHH--------HHHHHHHHH--HHHHHHHhhccC------------ccCCCceecchhHhh-HHHHHHHhhcchhhhcc Confidence 0000 000000000 001111111100 0110 1111111211 122222221 111101 Q ss_pred cccccceeeccceecC---CCCCCC Q lcl|Aclame:pro 256 THLATTTTTTTPFTIP---SNNTKG 277 (277) Q Consensus 256 ~~~~~~~~~~~~~~~~---~~~~~~ 277 (277) . .+. ++.+..+.+| +....+ T Consensus 143 ~-~~~-~~~~~~~~~~~~~~~~~~a 165 (395) T protein:vir:38 143 V-ENV-TTSHGSRVYEKLADITPLK 165 (395) T ss_pred e-eec-cCCcceEEEEeeccCCccc Confidence 1 111 1112233333 222222 No 43 >protein:vir:95376 Length: 425 # NCBI annotation: phage major capsid protein # Family: family:all:635 # MgeID: mge:1567 # MgeName: GBSV1 # Cross-refs: genbank:acc:YP_764476;genbank:gi:115334630;genbank:GeneID:5179263 Probab=41.41 E-value=0.93 Score=20.76 Aligned_cols=204 Identities=16% Similarity=0.180 Sum_probs=43.4 Q ss_pred CC-chhHHHHHHHHHHHHhhhHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 1 MS-TDGKLVSVYEEKIRNAKSLE----ELKQVWDEVQLQVADHKTQKRLWKAKEKREFELKYQEFEKLKAELSQKKKKVK 75 (277) Q Consensus 1 ms-td~KL~avyEEe~kka~kle----ELkQK~EEaeKQiad~k~ekK~E~ErQKaEiE~QRaEiEkqKAEiErqKkEiE 75 (277) |- -+.+|.++.++...+..++. +++.+..|+++.+.+++++. |. ..++.+...+++.+.+++..+.+++ T Consensus 1 ~~~~~~~~~~el~~~~~~l~el~~~~~el~~~~~el~~~~e~ak~ee--e~----~~l~~ei~~le~e~~~l~~~~~~le 74 (425) T protein:vir:95 1 MALRQLMLTKKIEQRKAALDELVKREQELQAKAAELEQAIEEAQTEE--EV----SAVEEEVAKLEDERNELNEKKSKLE 74 (425) T ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHH--HH----HHHHHHHHHHHHHHHHHHHHHHHHH Confidence 43 23356666665555544433 44444444444444333221 11 1122222233344444444444444 Q ss_pred HHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHhhHHHHHHHHHHHHHHHHHcCeeeeeeccceeeEEEcCcceeeecccCC Q lcl|Aclame:pro 76 KERVDVKVKITKKWINSRL-FTAEHYIAMLQQSKDGLQLLFLRRAKLVENQGYLMLEVKKMKKVWVLNGEPLLLEKNKFP 154 (277) Q Consensus 76 kqkaEiE~k~qKkEiEsQk-aEAErqkAElErqR~EIElL~L~~a~L~Eq~g~L~L~~kkgkK~~vl~~~pl~l~k~k~~ 154 (277) .+.++.+.+. .+++.+. .+...-... ..+.........+...+.....+..... . .+ T Consensus 75 ~~~~~~~~~l--~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~----------------~~ 132 (425) T protein:vir:95 75 GEIAQLEDEL--EQINSKQPSNQSRQKMQ-GSKGDVVEMNRLQVREMLKTGEYYKRSE---V----------------VE 132 (425) T ss_pred HHHHHHHHHH--HHhhhhccchhhhhhhh-hhhhhHHHHHHHHHHHHHhhhhhhhhhH---H----------------HH Confidence 3333222100 0000000 000000000 0000000000000000000000000000 0 00 Q ss_pred cchheeeeeeecCCCceeechhhhhHHHHHHHhh---ccchHHHHHHHHHHHHHHHHhhcCChhHHHHHHHHHHHhHHHH Q lcl|Aclame:pro 155 FGKKFVAVWFTLPDYPYTLNLVVDEKIRQLTLKT---LNAPQIIHSVIKTKFFEALAKVGAGPDLMMLIIGVIMGVGIGV 231 (277) Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (277) +- ........-+ .-.|+-+ -..+++.|-..+. |++ + T Consensus 133 ~~----------------------~~~~~~~~~~~gg~~vP~~~----~~~Ii~~l~~~~~-----------i~~----~ 171 (425) T protein:vir:95 133 FY----------------------EKFRNLRAVAGGELTIPEVV----VNRIMDIMGDYTT-----------LYP----L 171 (425) T ss_pred HH----------------------HHHHhhcccccCceeccHHH----HHHHHHHHHhhhh-----------HHH----h Confidence 00 0000100000 0012211 1122233222110 010 0 Q ss_pred HHhhccchhhHHHHhhhhhccccccc-----cccceeeccce---ecCCCCCCC Q lcl|Aclame:pro 232 AIGFGIANANLTHLLSQHVANTTTTH-----LATTTTTTTPF---TIPSNNTKG 277 (277) Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~---~~~~~~~~~ 277 (277) +--+.. ..|+.. |..+..+.+. .+.+.+..+.| +++...-.+ T Consensus 172 ~~~~~~-~g~~~i---p~~~~~~~a~~v~E~~~~~~~~~~~f~~i~l~~~k~~~ 221 (425) T protein:vir:95 172 VDKIRV-KGTTRI---LVDTDTSPATWIEQSGALPTGDVGTIASIDFDGFKVGK 221 (425) T ss_pred hceeec-CceeEE---EEecCCccccccccccccccccccccceeeeeheeeee Confidence 000000 011110 0001000000 00000011112 221111111 No 44 >protein:vir:77597 Length: 725 # NCBI annotation: portal protein # Family: family:all:487 # MgeID: mge:46 # MgeName: P22 # Cross-refs: genbank:acc:YP_063735;genbank:gi:51236726;genbank:GeneID:2944241 Probab=36.35 E-value=1.2 Score=20.19 Aligned_cols=125 Identities=11% Similarity=0.005 Sum_probs=23.4 Q ss_pred CCchhHHHHHHHHHHHHhhhHHHHHHHHHHHHHH--HHHHHHH-H--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 1 MSTDGKLVSVYEEKIRNAKSLEELKQVWDEVQLQ--VADHKTQ-K--RLWKAKEKREFELKYQEFEKLKAELSQKKKKVK 75 (277) Q Consensus 1 mstd~KL~avyEEe~kka~kleELkQK~EEaeKQ--iad~k~e-k--K~E~ErQKaEiE~QRaEiEkqKAEiErqKkEiE 75 (277) +..+..-.. +.+...+++.++-++..+..+.| +..++.+ . +.|..+...+.....++.+...++......+.. T Consensus 581 ~~q~~~~~e--~q~~~~~qq~~~~q~~~e~~q~q~~~~~~qa~~~kaq~e~~k~q~~a~~~~~~a~~~aa~~~~~~~q~~ 658 (725) T protein:vir:77 581 VKKPETPEE--QQWLVEAQQAKQGQQDPAMVQAQGVLLQGQAELAKAQNQTLSLQIDAAKVEAQNQLNAARIAEIFNNMD 658 (725) T ss_pred ccCCCChhh--HHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Confidence 211111100 01111111111111111111111 1111111 1 112221222222222222222222211111110 Q ss_pred -HHHHHHH------HHHHHHHHHHHHHHHHHH-HHHHH---hhHHHHHHHHHHHH----HHHHHcCe Q lcl|Aclame:pro 76 -KERVDVK------VKITKKWINSRLFTAEHY-IAMLQ---QSKDGLQLLFLRRA----KLVENQGY 127 (277) Q Consensus 76 -kqkaEiE------~k~qKkEiEsQkaEAErq-kAElE---rqR~EIElL~L~~a----~L~Eq~g~ 127 (277) .++++++ ...++.-..+-++.+|.. +++.. ++..-.+.+..... -.+++.-. T Consensus 659 ~~q~a~~~~~~~~~~~~q~~~~~~~~~~ae~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~ 725 (725) T protein:vir:77 659 LSKQSEFREFLKTVASFQQDRSEDARANAELLLKGDEQTHKQRMDIANILQSQRQNQPSGSVAETPQ 725 (725) T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHhhhHHHhhHHHHHHHHHHHHhcCCCcCcccCCC Confidence 1111111 011111112222223321 11111 11222233321111 11222222 No 45 >protein:vir:4830 Length: 397 # NCBI annotation: MPL-7201 # Family: family:all:21 # MgeID: mge:105 # MgeName: 7201 # Cross-refs: genbank:acc:NP_038327;genbank:gi:9634653;genbank:GeneID:1262632 Probab=35.53 E-value=1.2 Score=20.10 Aligned_cols=184 Identities=15% Similarity=0.105 Sum_probs=30.0 Q ss_pred CCchhHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 1 MSTDGKLVSVYEEKIRNAKSLEELKQVWDEVQLQVADHKTQKRLWKAKEKREFELKYQEFEKLKAELSQKKKKVKKERVD 80 (277) Q Consensus 1 mstd~KL~avyEEe~kka~kleELkQK~EEaeKQiad~k~ekK~E~ErQKaEiE~QRaEiEkqKAEiErqKkEiEkqkaE 80 (277) |++=.+|.+.+++..+...+++ ++.++... +.+....|++.-+++++.+.++++..+...+..+.. T Consensus 1 Mk~~~el~~~~~~~~~~i~~~~---~~~~~~~~-----------~~~~~~ee~~~l~~ei~~~~~~~~~~~~~~~~~~~~ 66 (397) T protein:vir:48 1 MKTSNELHDLWVAQGDKVENLN---EKLNVAML-----------DDSVTAEELQAIKNERDTAKMKRDMFKEQYTEARAN 66 (397) T ss_pred CchHHHHHHHHHHHHHHHHHHH---HHHHHhhc-----------chhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh Confidence 5555555444444433322221 11111110 111122233333333333333333322222221111 Q ss_pred HHHHH---HHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHcCeeeeeeccceeeEEEcCcceeeecccCCcch Q lcl|Aclame:pro 81 VKVKI---TKKWINSRLFTAEHYIAMLQQSKDGLQLLFLRRAKLVENQGYLMLEVKKMKKVWVLNGEPLLLEKNKFPFGK 157 (277) Q Consensus 81 iE~k~---qKkEiEsQkaEAErqkAElErqR~EIElL~L~~a~L~Eq~g~L~L~~kkgkK~~vl~~~pl~l~k~k~~~~~ 157 (277) ..... .+...+.. .+...++. +..... ... +... T Consensus 67 ~~~~~~~~~~~~~~~~---~~~~~~~~---~~~~~~-------~~~-------------------~~~~----------- 103 (397) T protein:vir:48 67 EVVNMSEEEKKPLTKS---EEEVKAGF---VKDFKN-------LVR-------------------GRYQ----------- 103 (397) T ss_pred hhhhhhhhccccccch---hhHHHHHH---HHHHHH-------HHh-------------------hhhh----------- Confidence 11000 00000000 00000000 000000 000 0000 Q ss_pred heeeeeeecCCCceeechhhhhHHHHHHHh-hccchHHHHHHHHHHHHHHHHhhcCChhHHHHHHHHHHHhHHHHHHhhc Q lcl|Aclame:pro 158 KFVAVWFTLPDYPYTLNLVVDEKIRQLTLK-TLNAPQIIHSVIKTKFFEALAKVGAGPDLMMLIIGVIMGVGIGVAIGFG 236 (277) Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (277) ..++ ....- +-+...+|-.-+-+.+.+.+...+ +|++. +--.- T Consensus 104 ------------------~~~~---~~~~~t~~~gg~~iP~~~~~~ii~~~~~~~-----------~l~~~----~~~~~ 147 (397) T protein:vir:48 104 ------------------NLLD---SKTDASGSDAGLTIPQDIQTAIHTLVRQYD-----------SLQEY----VNVEN 147 (397) T ss_pred ------------------HHHH---HhhccCCccccccccHHHHHHHHHHHHHHH-----------HHHhh----hceee Confidence 0000 00000 000000000000111111111111 00000 00000 Q ss_pred cchhhHHHHhhhhhccccc-------cccccc-eeeccceecCCCCCCC Q lcl|Aclame:pro 237 IANANLTHLLSQHVANTTT-------THLATT-TTTTTPFTIPSNNTKG 277 (277) Q Consensus 237 ~~~~~~~~~~~~~~~~~~~-------~~~~~~-~~~~~~~~~~~~~~~~ 277 (277) +...+.....-+..+.... ...+++ +.+-.+.++....-.+ T Consensus 148 ~~~~~~~~~~~~~~~~~~~a~~v~E~~~~~~~~~~~~~~v~~~~~k~~~ 196 (397) T protein:vir:48 148 VTTLTGSRVYEKWADITGLAKLDDEAGSIGTNDDPKLYPIRYAIKRYAG 196 (397) T ss_pred ccCCcceEEEEeecCCCcceeeeccccccccccccceeeEEeeheeeee Confidence 0000000000000000000 000000 0011111111111111 No 46 >protein:vir:104256 Length: 458 # NCBI annotation: major head protein precursor # Family: family:all:27070 # MgeID: mge:1504 # MgeName: T5 # Cross-refs: genbank:acc:YP_006977;genbank:gi:46401878;genbank:GeneID:2777673 Probab=31.86 E-value=1.5 Score=19.67 Aligned_cols=250 Identities=13% Similarity=0.093 Sum_probs=55.7 Q ss_pred CCchhHHHHHHHH----HHHHhhhHHHHHHHHHHHHHH--------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 1 MSTDGKLVSVYEE----KIRNAKSLEELKQVWDEVQLQ--------VADHKTQKRLWKAKEKREFELKYQEFEKLKAELS 68 (277) Q Consensus 1 mstd~KL~avyEE----e~kka~kleELkQK~EEaeKQ--------iad~k~ekK~E~ErQKaEiE~QRaEiEkqKAEiE 68 (277) |.-|+. .+.+| +.++.++-.++.+|..+.++. +.++........+.++++++....|++.+.++.. T Consensus 1 ~~~~~~--~~~~e~~~~e~a~~~~~~~~~~k~~e~~~~~ke~~~~~l~~~~e~~~k~~~E~~~~le~~~ee~k~l~ee~~ 78 (458) T protein:vir:10 1 MTIDIN--KLKEELGLGDLAKSLEGLTAAQKAQEAERMRKEQEEKELARMNDLVSKAVGEDRKRLEEALELVKSLDEKSK 78 (458) T ss_pred Cccchh--hhhhhhchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Confidence 544332 22222 222222322333433332221 1111111111111122223322233322222211 Q ss_pred HHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHH------------------HHHhhHHHHHHHHHH--------- Q lcl|Aclame:pro 69 QKKKK----VKKERVDVKVKITKKWINSRLFTAEHYIA------------------MLQQSKDGLQLLFLR--------- 117 (277) Q Consensus 69 rqKkE----iEkqkaEiE~k~qKkEiEsQkaEAErqkA------------------ElErqR~EIElL~L~--------- 117 (277) +.... .++....+. ..+.+...+....++... +.++ +.-.+.+..+ T Consensus 79 ~~~~~~a~~~e~~~~~~~--~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~e~-~~~~~~~~~~~~~~~~~~~ 155 (458) T protein:vir:10 79 KSNELFAQTVEKQQETIV--GLQDEIKSLLTAREGRSFVGDSVAKALYGTQENFEDEVEK-LVLLSYVMEKGVFETEHGQ 155 (458) T ss_pred HHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHhhhhhhhhhhccchhhhhhHHHHHHH-HHHHHHHHhhccchhhhhh Confidence 11110 011100000 000111111111111000 0000 0000000000 Q ss_pred --H-----HHHHHHcCeeeee---------------eccceeeEEEcCcc----eeeecccCCcch-------------- Q lcl|Aclame:pro 118 --R-----AKLVENQGYLMLE---------------VKKMKKVWVLNGEP----LLLEKNKFPFGK-------------- 157 (277) Q Consensus 118 --~-----a~L~Eq~g~L~L~---------------~kkgkK~~vl~~~p----l~l~k~k~~~~~-------------- 157 (277) . +-..+.-|+++-. ++.+-.+.-+++.. +.-+....-|.. T Consensus 156 ~~~~a~~~~~~~~~g~~~ip~~~~~~ii~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~a~~v~e~~~~~~~~~~~~~ 235 (458) T protein:vir:10 156 RHLKAVNQSSSVEVSSESYETIFSQRIIRDLQKELVVGALFEELPMSSKILTMLVEPDAGKATWVAASTYGTDTTTGEEV 235 (458) T ss_pred hhhhhhhhcccCccccceehhhHhHHHHHHHHhhhhHHhhcceeecCCcceEEEEecCCcceeecccccccccccccccc Confidence 0 0000111112110 00000011111111 111111111100 Q ss_pred --heeeeeeecCCCceeechhhhhHHHHHHHhhccchHHHHHHHHHHHHHHHHhhcCChhHHHHHHHHHHHhHHHHHHhh Q lcl|Aclame:pro 158 --KFVAVWFTLPDYPYTLNLVVDEKIRQLTLKTLNAPQIIHSVIKTKFFEALAKVGAGPDLMMLIIGVIMGVGIGVAIGF 235 (277) Q Consensus 158 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (277) +|.-+ +++-+-+..-+.|...+-+- ++.=+-+.|...+-+++++- .|..+| -|-|-|-- . T Consensus 236 ~~~~~~i--~~~~~k~~~~v~is~ell~d------s~~~~~~~i~~~l~~~i~~~---~d~~~l-----~G~G~~~p--~ 297 (458) T protein:vir:10 236 KGALKEI--HFSTYKLAAKSFITDETEED------AIFSLLPLLRKRLIEAHAVS---IEEAFM-----TGDGSGKP--K 297 (458) T ss_pred cccceee--EeeeeeEEeeehhhHHHHhc------chHHHHHHHHHHHHHHHHHH---HHHHhh-----cCCCCCcc--c Confidence 11111 22223333334444433211 11225577777777777763 455432 22222221 1 Q ss_pred ccchhhHHHHhhh--hhccccccccccceeecc----ceecCCCCCCC Q lcl|Aclame:pro 236 GIANANLTHLLSQ--HVANTTTTHLATTTTTTT----PFTIPSNNTKG 277 (277) Q Consensus 236 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~ 277 (277) ||.+. .... .+++.+++..+++.+.-. -..++++...+ T Consensus 298 Gi~~~----~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~l~~~~~~~ 341 (458) T protein:vir:10 298 GLLTL----ASEDSAKVVTEAKADGSVLVTAKTISKLRRKLGRHGLKL 341 (458) T ss_pred eeeec----ccccccceeecccccccccccHHHHHHHHHhhhhhhcCC Confidence 22211 1000 011111111000000000 00123332222 No 47 >protein:vir:95821 Length: 763 # NCBI annotation: 94 kDa protein # Family: family:all:1548 # MgeID: mge:1586 # MgeName: N4 # Cross-refs: genbank:acc:YP_950537;genbank:gi:119952228;genbank:GeneID:5075648 Probab=31.39 E-value=1.5 Score=19.62 Aligned_cols=167 Identities=8% Similarity=-0.052 Sum_probs=32.4 Q ss_pred CCchhHHHHHHHHHHHHhhh---H---HHH-HHHHH--HHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 1 MSTDGKLVSVYEEKIRNAKS---L---EEL-KQVWD--EVQLQVADHKTQ--KRLWKAKEKREFELKYQEFEKLKAELSQ 69 (277) Q Consensus 1 mstd~KL~avyEEe~kka~k---l---eEL-kQK~E--EaeKQiad~k~e--kK~E~ErQKaEiE~QRaEiEkqKAEiEr 69 (277) .|.+..-.+.+.++...... . ..+ .+..+ ........++.. +....+.+.++++.++++.+.+.+.... T Consensus 562 as~~~q~~~~l~~ll~~l~~~~~~~~~~~il~~~~d~~~~~~~~~~lr~~q~~~d~~~q~qaqle~~~~q~e~~~~~aka 641 (763) T protein:vir:95 562 AEVDNQKSQDLGFMLQTIGPNVDQQITLNILAEIADLKRMPKLAHDLRTWQPQPDPVQEQLKQLAVEKAQLENEELRSKI 641 (763) T ss_pred chHHHHHHHHHHHHHHHhccccChHHHHHHHHHHHhhhchhhhHHHHHhcCCCccchhhhHHHHHHHHHHHHHHHHHHHH Confidence 22222222222222111100 0 000 00000 000000000000 0001111111222222222211111111 Q ss_pred HHHHHHHHHHHHHHH--HHHHHHHH----HHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHcCe-----------eeeee Q lcl|Aclame:pro 70 KKKKVKKERVDVKVK--ITKKWINS----RLFTAEHYIAMLQQSKDGLQLLFLRRAKLVENQGY-----------LMLEV 132 (277) Q Consensus 70 qKkEiEkqkaEiE~k--~qKkEiEs----QkaEAErqkAElErqR~EIElL~L~~a~L~Eq~g~-----------L~L~~ 132 (277) +.++.+.++...+.+ ..+++..+ +-.+++..+++.+-++ +++.+.-+.....+..+. |-... T Consensus 642 q~~qaqa~~~~aq~e~~~~d~~~~e~~~Q~~~e~~~~~~~~eaq~-~l~~~~a~~~~~~ea~~~~~~~~~~~~~~~~~~~ 720 (763) T protein:vir:95 642 RLNDAQAQKAMAERDNKNLDYLEQESGTKHARDLEKMKAQSQGNQ-QLEITKALTKPRKEGELPPNLSAAIGYNALTNGE 720 (763) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHhccChhHHHhhhhccccccc Confidence 111111111111100 00000000 0111111111111111 223333233333332222 22222 Q ss_pred ccceeeE-EEcCcce-----eeecc-cCCcchheeeeeeecCC Q lcl|Aclame:pro 133 KKMKKVW-VLNGEPL-----LLEKN-KFPFGKKFVAVWFTLPD 168 (277) Q Consensus 133 kkgkK~~-vl~~~pl-----~l~k~-k~~~~~~~~~~~~~~~~ 168 (277) ..|...- .-..-|+ .+.+. --|=|---..-.|+|-+ T Consensus 721 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 763 (763) T protein:vir:95 721 DTGIQSVSERDIAAEANPAYSLGSSQFDPTRDPALNPGIRLGN 763 (763) T ss_pred CCCccchhhcccCccccccccCCCCCCCCCCccccCCcccccC Confidence 2222221 1111111 11111 11333344444566655 No 48 >protein:vir:100135 Length: 418 # NCBI annotation: gp5 # Family: family:all:585 # MgeID: mge:1639 # MgeName: phi1026b # Cross-refs: genbank:acc:NP_945035;genbank:gi:38707895;genbank:GeneID:2744182 Probab=29.57 E-value=1.6 Score=19.39 Aligned_cols=186 Identities=14% Similarity=0.050 Sum_probs=29.7 Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHH---HHHHHH Q lcl|Aclame:pro 18 AKSLEELKQVWDEVQLQVADHKTQKRLWKAKEKREFELKYQEFEKLKAELSQKKKKVKKERVDV--KVKIT---KKWINS 92 (277) Q Consensus 18 a~kleELkQK~EEaeKQiad~k~ekK~E~ErQKaEiE~QRaEiEkqKAEiErqKkEiEkqkaEi--E~k~q---KkEiEs 92 (277) +-++-+ ..+.++..++.+..+++++..++++++...+++....+. +.+.. -.|.+. T Consensus 1 ~~~~~~-------------------~~~~~~~~~~~~el~~~~~e~~~~l~~~~~e~~~~~e~~~~e~~~~~~~~~e~~~ 61 (418) T protein:vir:10 1 MSHMNE-------------------PRQFGRKSGGDSHPEQVLETVTKELKRIGDEVKSAGEKALAEAKRAGDLGVETKA 61 (418) T ss_pred CCCchh-------------------HHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHH Confidence 111111 001111111111111111122222222222221111110 01111 111111 Q ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHcCeeeeeeccceeeEEEcCcceeeecccCCcchheeeeeeecCCCcee Q lcl|Aclame:pro 93 RLFTAEHYIAMLQQSKDGLQLLFLRRAKLVENQGYLMLEVKKMKKVWVLNGEPLLLEKNKFPFGKKFVAVWFTLPDYPYT 172 (277) Q Consensus 93 QkaEAErqkAElErqR~EIElL~L~~a~L~Eq~g~L~L~~kkgkK~~vl~~~pl~l~k~k~~~~~~~~~~~~~~~~~~~~ 172 (277) +..++.....+++.+.++++... ++.... . ..-.+ -+.|..+ T Consensus 62 ~~~~l~~~~~~l~~~~~~~e~~~---~~~~~~-------~------~~~~~---------~~~~~~~------------- 103 (418) T protein:vir:10 62 TVDELLIKQGELQARLLEAEQKL---ARGGGS-------A------ELETP---------KTLGQLV------------- 103 (418) T ss_pred HHHHHHHHHHHHHHHHHHHHHHH---hhcccc-------c------ccchh---------hhhhHHh------------- Confidence 22222222222222222222211 000000 0 00000 0111111 Q ss_pred echhhhhHHHHHHHhhccchHHHHHHHHHHHHHHHHhhcCChh---------HHHHHHHHHHHhHHHHHHhhccchhhHH Q lcl|Aclame:pro 173 LNLVVDEKIRQLTLKTLNAPQIIHSVIKTKFFEALAKVGAGPD---------LMMLIIGVIMGVGIGVAIGFGIANANLT 243 (277) Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (277) .-.+.++.+..... ..... ..-.-.+.+.-+.+++|++ +.--||..+.. .+.|. T Consensus 104 ---~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~g~lvp~~~~~~ii~~~~~------------~~~l~ 166 (418) T protein:vir:10 104 ---TESEEMKGMDGSAR-KSVRV-RVDRKSIMNVPATVGSGVSGSNSLVVADRQAGIIAPPQR------------KMTIR 166 (418) T ss_pred ---hhHHHHHHHHHHHh-hhhhh-hhHHHHHHHhhhhccCCCCCCccccchhHHHHHHHHHhh------------hhhHH Confidence 01112222211111 11000 0111111222233333321 11112211111 11111 Q ss_pred HHhhhhhcccc--ccccccceeeccce-----ecCCCCCCC Q lcl|Aclame:pro 244 HLLSQHVANTT--TTHLATTTTTTTPF-----TIPSNNTKG 277 (277) Q Consensus 244 ~~~~~~~~~~~--~~~~~~~~~~~~~~-----~~~~~~~~~ 277 (277) .+....-+++. +-+.-++.+.+..| ++|..+.+- T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~a~~v~E~~~~~~~~~~f 207 (418) T protein:vir:10 167 DLLMPGQTSSSSIEYTVETGFTNNAAAVAEGAQKPTSDLKF 207 (418) T ss_pred hhcceeeccCCceeEEEEecCCCceeeeccCccccccccce Confidence 11100000000 00100110001111 111111110 No 49 >protein:vir:105429 Length: 708 # NCBI annotation: gene 3 protein # Family: family:all:487 # MgeID: mge:1556 # MgeName: Sf6 # Cross-refs: genbank:acc:NP_958179;genbank:gi:41057281;genbank:GeneID:2716676 Probab=29.43 E-value=1.7 Score=19.38 Aligned_cols=133 Identities=15% Similarity=0.066 Sum_probs=20.7 Q ss_pred CCchhHHHHHHHHHHHHhhh-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 1 MSTDGKLVSVYEEKIRNAKS-LEELKQVWDEVQLQVADHKTQKRLWKAKEKREFELKYQEFEKLKAELSQKKKKVKKERV 79 (277) Q Consensus 1 mstd~KL~avyEEe~kka~k-leELkQK~EEaeKQiad~k~ekK~E~ErQKaEiE~QRaEiEkqKAEiErqKkEiEkqka 79 (277) ...|+.-+...-|..++..- ....++..++.+.+.. ..+..+.++...+...-.+++.+..||+++.+++ ..+. T Consensus 570 ~~~D~p~~~ei~erir~~~~~~~~~~~~~~ee~q~~~---~~q~~~q~q~~~~~~e~qa~~~~~qAe~~ka~a~--a~~~ 644 (708) T protein:vir:10 570 DNIDGEGLDDFKEYNRNQLLISGIAKPRNEKEQQIVQ---QAQMAAQSQPNPEMVLAQAQMVAAQAEAQKATNE--TAQT 644 (708) T ss_pred HhcCCcChHHHHHHHHHhhcccccccccchhhHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHH Confidence 11222222222222222110 0011111111111000 0011111111111111111111222222222211 1111 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-----HHhhHHHHHHHHHHHHHHHHHcCeeeeeeccceeeEEEcCcceeeecccCC Q lcl|Aclame:pro 80 DVKVKITKKWINSRLFTAEHYIAM-----LQQSKDGLQLLFLRRAKLVENQGYLMLEVKKMKKVWVLNGEPLLLEKNKFP 154 (277) Q Consensus 80 EiE~k~qKkEiEsQkaEAErqkAE-----lErqR~EIElL~L~~a~L~Eq~g~L~L~~kkgkK~~vl~~~pl~l~k~k~~ 154 (277) ++..-+...+.+.-...+.+..++ ...+++..+.|. -.....+++--. |......--| T Consensus 645 ~~~a~q~~~~~~~a~~~a~q~~~~a~~~~~~~~~~~~q~l~-~~q~~q~~~~~~----------------~p~~~~~~~p 707 (708) T protein:vir:10 645 QIKAFTAQQDAMESQANTVYKLAQARNIDDKAVMEAIRLLK-DVAESQQQQFQS----------------PPQSPADLMP 707 (708) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-hhhhhHHHHHhc----------------cccCchhccC Confidence 111111111111111111110000 000111111111 001111111111 1111111111 Q ss_pred c Q lcl|Aclame:pro 155 F 155 (277) Q Consensus 155 ~ 155 (277) - T Consensus 708 ~ 708 (708) T protein:vir:10 708 S 708 (708) T ss_pred C Confidence 1 No 50 >protein:vir:7409 Length: 408 # NCBI annotation: major structural protein # Family: family:all:21 # MgeID: mge:146 # MgeName: P335 # Cross-refs: genbank:acc:NP_839926;genbank:gi:30089896;genbank:GeneID:1260683 Probab=26.69 E-value=1.9 Score=19.03 Aligned_cols=170 Identities=14% Similarity=0.139 Sum_probs=26.9 Q ss_pred CCchhHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHH--HH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 1 MSTDGKLVSVYEEKIRNAKSLEELKQVWDEVQLQVADHKTQKR--LW-KAKEKREFELKYQEFEKLKAELSQKKKKVKKE 77 (277) Q Consensus 1 mstd~KL~avyEEe~kka~kleELkQK~EEaeKQiad~k~ekK--~E-~ErQKaEiE~QRaEiEkqKAEiErqKkEiEkq 77 (277) |.-- + .++|++++++++..++.++..+-. .+ ......+++..+++++..+++++..+++++.. T Consensus 1 m~~~-------------m-~i~el~~~~~~~~~~~~~~~~e~~~~~~~~~~~~e~i~e~~~~~~~~~~~~~~~~~~~~~~ 66 (408) T protein:vir:74 1 MGVK-------------L-TVNQLNEAWIASGDKVTDFNDQINMALNDDNFSAEAMSELKNKRDNEKVRRDALREQLVEA 66 (408) T ss_pred CChh-------------h-hHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHH Confidence 3322 2 344444444444443333222111 11 11111223333333333333332222221111 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHcCeeeeeeccceeeEEEcCcceeeecccCCcch Q lcl|Aclame:pro 78 RVDVKVKITKKWINSRLFTAEHYIAMLQQSKDGLQLLFLRRAKLVENQGYLMLEVKKMKKVWVLNGEPLLLEKNKFPFGK 157 (277) Q Consensus 78 kaEiE~k~qKkEiEsQkaEAErqkAElErqR~EIElL~L~~a~L~Eq~g~L~L~~kkgkK~~vl~~~pl~l~k~k~~~~~ 157 (277) ..+. ....-+..+........+.. ...... +....+ T Consensus 67 ~~~~----~~~~~~~~~~~~~~~~~~~~--~~~~~~-~~~~~~------------------------------------- 102 (408) T protein:vir:74 67 QAEQ----VVNMREEEKGPLNKSENELK--DKFVKD-FVNMVR------------------------------------- 102 (408) T ss_pred HHHH----HhhccccccccccchhhhhH--HHHHHH-HHHHHh------------------------------------- Confidence 1000 00000000000000000000 000000 000000 Q ss_pred heeeeeeecCCCceeechhhhhHHHHHHHhhccchHHHHHHHHHHHHHHHHhhcCCh----hHHHHHHHHHHHhHHHHHH Q lcl|Aclame:pro 158 KFVAVWFTLPDYPYTLNLVVDEKIRQLTLKTLNAPQIIHSVIKTKFFEALAKVGAGP----DLMMLIIGVIMGVGIGVAI 233 (277) Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~ 233 (277) +...+.+. ...+-.-...--.||+ ++.--||-.+-.. T Consensus 103 --------------------------------~~~~~~~~-~~~~a~~~~~~~~gg~~vP~~~~~~Ii~~~~~~------ 143 (408) T protein:vir:74 103 --------------------------------NPMAFLNT-VSSKTETSGSDSAAGLTIPQDIRTMINTLVRQY------ 143 (408) T ss_pred --------------------------------cchhhhhh-hhhhhhcccccCCCceeechhHhhHHHHHHhhh------ Confidence 00000000 0000000000000110 1111111111111 Q ss_pred hhccchhhHHHHhhhhhc--ccccc----ccccc-eeecccee------cCC--CCCCC Q lcl|Aclame:pro 234 GFGIANANLTHLLSQHVA--NTTTT----HLATT-TTTTTPFT------IPS--NNTKG 277 (277) Q Consensus 234 ~~~~~~~~~~~~~~~~~~--~~~~~----~~~~~-~~~~~~~~------~~~--~~~~~ 277 (277) +. |.+.++ ++++. +.+.- +++..... +|. +.+-+ T Consensus 144 ------~~----l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~E~~~~~~~~~~~~~ 192 (408) T protein:vir:74 144 ------DS----LQQYVRVESVSTSSGSRVYEKWTDVTPLKAMDEEDGKIPDLDNPRLT 192 (408) T ss_pred ------cc----hhhhcceeeccCCcceEEEEeecCCccccccccccccccccccccee Confidence 11 111110 00000 00000 00000001 110 00001 No 51 >protein:vir:172 Length: 708 # NCBI annotation: portal protein # Family: family:all:487 # MgeID: mge:5 # MgeName: HK620 # Cross-refs: genbank:acc:NP_112077;genbank:gi:13559867;genbank:GeneID:920970 Probab=24.94 E-value=2.1 Score=18.80 Aligned_cols=116 Identities=8% Similarity=-0.076 Sum_probs=22.1 Q ss_pred CCchhHHHHHHH--------------HHHHHhhhHHHHHH-HH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 1 MSTDGKLVSVYE--------------EKIRNAKSLEELKQ-VW----DEVQLQVADHKTQKRLWKAKEKREFELKYQEFE 61 (277) Q Consensus 1 mstd~KL~avyE--------------Ee~kka~kleELkQ-K~----EEaeKQiad~k~ekK~E~ErQKaEiE~QRaEiE 61 (277) +---.+|.+..- ++....++..+.++ +. .+++.+. .+.+.+.++++.+..+++++ T Consensus 574 ~p~~~ei~e~ir~~~~~~~~~~~~~~e~~q~~~q~qq~~q~q~~~~~~eaqa~~------~~~qAe~~ka~aea~~~q~~ 647 (708) T protein:vir:17 574 GEGLDDFKEYNRNQLLISGIAKPRNEKEQQIVQQAQMAAQSQPNPEMVLAQAQM------VAAQAEAQKATNETAQTQIK 647 (708) T ss_pred CCChHHHHHHHHHHhhccccccCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHH Confidence 211122222211 11111111001011 00 0111111 12223333333333334444 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHcCeeeee Q lcl|Aclame:pro 62 KLKAELSQKKKKVKKERVDVKVKITKKWINSRLFTAEHYIAMLQQSKDGLQLLFLRRAKLVENQGYLMLE 131 (277) Q Consensus 62 kqKAEiErqKkEiEkqkaEiE~k~qKkEiEsQkaEAErqkAElErqR~EIElL~L~~a~L~Eq~g~L~L~ 131 (277) ..+++.+...++.+..+.-..... .....+++.++........+-+.+++.- -+.--+.-+ T Consensus 648 a~q~~~~~~~a~~~a~q~~~q~~~--~~~~~~~~~~~~l~~~q~~q~q~~~a~p-------~~~~~~~~~ 708 (708) T protein:vir:17 648 AFTAQQDAMESQANTVYKLAQARN--IDDKAVMEAIRLLKDVAESQQQQFQSPP-------QSPADLMPS 708 (708) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHhhhhhhhHHHHHhccc-------cCchhccCC Confidence 333333333332211110000000 0011111111111111000001111100 000000000 No 52 >protein:vir:80128 Length: 466 # NCBI annotation: Phage capsid protein # Family: family:all:635 # MgeID: mge:1877 # MgeName: bacteriophage bv1 # Cross-refs: genbank:acc:YP_001425603;genbank:gi:155042936;genbank:GeneID:5469556 Probab=21.01 E-value=2.7 Score=18.24 Aligned_cols=197 Identities=13% Similarity=0.149 Sum_probs=29.6 Q ss_pred CCchh-HHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 1 MSTDG-KLVSVYEEKIRNAKSLEELKQVWDEVQLQVADHKTQKRLWKAKEKREFELKYQEFEKLKAELSQKKKKVKKERV 79 (277) Q Consensus 1 mstd~-KL~avyEEe~kka~kleELkQK~EEaeKQiad~k~ekK~E~ErQKaEiE~QRaEiEkqKAEiErqKkEiEkqka 79 (277) ||..- +|.++.++. ..++.+|+++.++++++..++.. +.++-+.-+++.. ++.+...+++... T Consensus 1 ~~~~~~~l~~~~~~~---~~~l~el~e~~~~l~k~~~el~~--~l~ea~~~ee~~~-----------~ee~i~~l~~~~~ 64 (466) T protein:vir:80 1 MALRQLMLAKKIEQR---KAALAELLEQEKALQKRSEELEA--AIDEANTDEEIAV-----------VEDEINKLEGEKT 64 (466) T ss_pred CchHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHH--HHHhhhhHHHHHH-----------HHHHHHHHHHHHH Confidence 66532 222222222 22233333333333333322111 1110000000000 0000011111111 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHcCeeeeeeccceeeEEEcCcceeeecccCCcchhe Q lcl|Aclame:pro 80 DVKVKITKKWINSRLFTAEHYIAMLQQSKDGLQLLFLRRAKLVENQGYLMLEVKKMKKVWVLNGEPLLLEKNKFPFGKKF 159 (277) Q Consensus 80 EiE~k~qKkEiEsQkaEAErqkAElErqR~EIElL~L~~a~L~Eq~g~L~L~~kkgkK~~vl~~~pl~l~k~k~~~~~~~ 159 (277) ++ +++...++...+.++....+++.. .+.. +.+|-... T Consensus 65 el---------~e~~~~l~~ei~~le~el~e~~~~-------~~~~----------------~~~~~~~~---------- 102 (466) T protein:vir:80 65 EL---------EEKKSKLEGEIKELENELEQLNNK-------EPKN----------------NSEPAQVS---------- 102 (466) T ss_pred HH---------HHHHHHHHHHHHHHHHHHHHHHHh-------hhcc----------------CchhHHHH---------- Confidence 11 111111111111111111111100 0000 00000000 Q ss_pred eeeeeecCCCceeechhhhhHHHHHHHhhccchHHHHHHHHH---HHHHHH---Hh----hcCChhHH--HHHHHHHHHh Q lcl|Aclame:pro 160 VAVWFTLPDYPYTLNLVVDEKIRQLTLKTLNAPQIIHSVIKT---KFFEAL---AK----VGAGPDLM--MLIIGVIMGV 227 (277) Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~---~~----~~~~~~~~--~~~~~~~~~~ 227 (277) ...+.+.... .+..+. ..+.+...+-.+...+. .|+..+ +. +++| +++ =-++.-|+- T Consensus 103 ----~~~~~~~~~~----~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~~vP~~~~~~i~~- 171 (466) T protein:vir:80 103 ----GARTQQFVGG----ETRMKG-FFRNMPYEQRAALIARSEVKEFLAQVRTLAQQKRAVSGA-ELTIPDVMLELLRD- 171 (466) T ss_pred ----hhhhhHHhhH----HHHHHH-HHHhhhhhhHHHHHHHHHHHHHHHHHHHHhhhhhhhccc-cccccHHHHHHHHH- Confidence 0000000000 011110 11111111111110000 111111 11 1111 000 001111110 Q ss_pred HHHHHHhhccchhhHHHHhhhhhccccccc--cccceeeccce-------ecCC-CCCCC Q lcl|Aclame:pro 228 GIGVAIGFGIANANLTHLLSQHVANTTTTH--LATTTTTTTPF-------TIPS-NNTKG 277 (277) Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~-------~~~~-~~~~~ 277 (277) ...=.+-|.++|+-.++.. .....+..+.+ .+|. +.+-+ T Consensus 172 -----------~l~~~~~l~~~~~v~~~~g~~~~~~~~~~~~a~wv~E~~~~~~~~~~f~ 220 (466) T protein:vir:80 172 -----------NMHRYSKLISKVRLRPLKGTARQNIAGAIPEGVWTEAVANLNELSLSFS 220 (466) T ss_pred -----------hhhhhhhhhhheeeeecCceeEeeeecCCcceeeccccccccccccccc Confidence 0011123344432111100 00000000000 0110 00000 Done!