Query lcl|Aclame:protein:vir:6374|NCBI_annot:hypothetical protein|genbank:acc:NP_918987;genbank:gi:34610162;genbank:gi:91214208;genbank:GeneID:2559591 Match_columns 179 No_of_seqs 9 out of 12 Neff 2.8 Searched_HMMs 1612 Date Sat Nov 30 14:05:22 2013 Command /home/guerois/workspace/virfam/python/lib/hhsearch//hhsearch2 -i .//seq/seq_30 -d /home/guerois/workspace/virfam/python/profile_database/capsid_neck_tail.hhm -glob -cpu 7 -o .//seq/HHR/seq_30_vs_rec_db.hhr No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM 1 protein:vir:6374 Length: 179 # 100.0 4E-101 3E-104 571.0 12.7 179 1-179 1-179 (179) 2 protein:vir:3428 Length: 131 # 59.9 0.38 0.00024 22.9 7.3 121 1-168 1-131 (131) 3 protein:vir:79571 Length: 137 32.0 1.5 0.00091 19.7 7.5 128 1-170 1-137 (137) 4 protein:vir:397 Length: 132 # 29.2 1.7 0.001 19.3 7.8 128 1-168 1-132 (132) 5 protein:vir:99226 Length: 157 11.4 5.6 0.0035 16.5 10.5 143 1-179 1-157 (157) 6 protein:vir:79247 Length: 157 8.9 7.3 0.0046 15.8 9.6 146 1-179 1-157 (157) 7 protein:vir:81066 Length: 118 2.3 29 0.018 12.6 6.4 117 8-169 1-118 (118) 8 protein:vir:99874 Length: 154 1.6 35 0.022 12.1 1.3 52 1-52 96-154 (154) 9 protein:vir:80036 Length: 111 1.4 17 0.011 13.8 -0.8 65 1-85 34-111 (111) 10 protein:vir:9514 Length: 135 # 1.2 54 0.034 11.0 2.3 45 1-46 77-135 (135) No 1 >protein:vir:6374 Length: 179 # NCBI annotation: hypothetical protein # Family: family:all:29418 # MgeID: mge:133 # MgeName: BcepNazgul # Cross-refs: genbank:acc:NP_918987;genbank:gi:34610162;genbank:gi:91214208;genbank:GeneID:2559591 Probab=100.00 E-value=4.1e-101 Score=570.96 Aligned_cols=179 Identities=100% Similarity=1.513 Sum_probs=178.9 Q ss_pred CCcCchHHHHHHHHHHHhhcccccCceeecccCceeeeeeEecCCCCcceEEecCCcCCCCcCCCCccCceecCcceeEE Q lcl|Aclame:pro 1 MQRDPKKLVILKKLTAHLEGVTPTNGFQFDLSSGIYRNRVQFGAETPAPAVSILEAQRPDHGLDADENGQAQSEDWLLLV 80 (179) Q Consensus 1 ~~~dpfRl~IlkaLTa~Le~ITiANGY~~Dla~~VfRGR~~fgenDp~P~vsILE~p~pp~~~~a~~s~~~~~~~w~llv 80 (179) ||||||||+|||+||+||++||+||||+||||.||||||++||+|+|+|||||||+|+|.+++.++.+++++.+.|.+++ T Consensus 1 ~~~~p~~l~i~k~LTs~L~~iT~aNGy~fDl~~~vfRgR~~fg~~~p~P~vsilE~~~p~~~lg~d~ng~vq~~~w~~l~ 80 (179) T protein:vir:63 1 MQRDPKKLVILKKLTAHLEGVTPTNGFQFDLSSGIYRNRVQFGAETPAPAVSILEAQRPDHGLDADENGQAQSEDWLLLV 80 (179) T ss_pred CCCCchhhhhhHHHHHHhhhcccccccccchhhhhhhcceeecCCCCCcEEEeecccCCccccCCCCCCcccccchhhhh Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred EEEEecccCcccCccHHHHHHHHHHHHHHHHhhcCccCCCCcccchhhhhhhhhhcccCCCcccCchhhhccceEEEEEE Q lcl|Aclame:pro 81 QGWVNHAEGDKNPTDEAYRLMADVQVRLGELIAIDSSSGNPQYPSVYMLENLIAGMRAGPGVCRAPAEGASGRSYFYLPL 160 (179) Q Consensus 81 QG~v~~~dd~~nPtD~A~~L~ADv~k~La~~~~~~~~~~n~~~p~v~~l~~~v~~~~ig~~V~Rpp~e~~s~~a~F~lpl 160 (179) ||||+|+||++||||+||+|||||||||||++++|++|+||+|||+|||+|+|++|+||++|||||+|++|+|||||||| T Consensus 81 Qg~V~~aed~~hPtD~Ah~lmADVkkrL~~~~~~~~~~~np~~~~~~~~~n~i~~~~~gpgv~r~p~e~~s~~~yf~l~l 160 (179) T protein:vir:63 81 QGWVNHAEGDKNPTDEAYRLMADVQVRLGELIAIDSSSGNPQYPSVYMLENLIAGMRAGPGVCRAPAEGASGRSYFYLPL 160 (179) T ss_pred hhhhccccCCCCCccHHHHHHHHHHHHHhhhhccccCCCCCCCcchHHHHHHHhhhccCCccccCchhhcccceeEEEEe Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred EEEEeeccCCchhhccCCC Q lcl|Aclame:pro 161 NLKIANNTTDPYDLLPYRP 179 (179) Q Consensus 161 ~l~i~e~~~~Py~~~~~~~ 179 (179) +|||+||++|||||||||| T Consensus 161 ~l~i~~~~~dp~~~~~~~~ 179 (179) T protein:vir:63 161 NLKIANNTTDPYDLLPYRP 179 (179) T ss_pred EEEEeccCCCccccccCCC Confidence 9999999999999999999 No 2 >protein:vir:3428 Length: 131 # NCBI annotation: tail component # Family: family:all:911 # MgeID: mge:70 # MgeName: lambda # Cross-refs: genbank:acc:NP_040591;genbank:gi:9626255;genbank:GeneID:2703486 Probab=59.87 E-value=0.38 Score=22.86 Aligned_cols=121 Identities=21% Similarity=0.292 Sum_probs=65.4 Q ss_pred CCcCchHHHHHHHHHHHhhcccccCceeecccCceeeeeeEecCCCCcceEEecCCcCCCCcCCCCccCceecCcce--e Q lcl|Aclame:pro 1 MQRDPKKLVILKKLTAHLEGVTPTNGFQFDLSSGIYRNRVQFGAETPAPAVSILEAQRPDHGLDADENGQAQSEDWL--L 78 (179) Q Consensus 1 ~~~dpfRl~IlkaLTa~Le~ITiANGY~~Dla~~VfRGR~~fgenDp~P~vsILE~p~pp~~~~a~~s~~~~~~~w~--l 78 (179) |+..=+|..|+.+|.+++.+|| +|-||-.|-|+..+|.|++-=.-.-..+..- -.+.|. | T Consensus 1 ~~ht~IR~~Vid~L~~~l~~v~------------~fdG~P~fide~ElPAVAV~l~d~~~~~~~l------d~~~w~A~L 62 (131) T protein:vir:34 1 MKHTELRAAVLDALEKHDTGAT------------FFDGRPAVFDEADFPAVAVYLTGAEYTGEEL------DSDTWQAEL 62 (131) T ss_pred CchHHHHHHHHHHHhccCCceE------------EecCCceeeccccCcEEEEEeecCCCCccee------cCCeeEEEE Confidence 9999999999999999887753 6889977777778999987432211222211 145665 5 Q ss_pred EEEEEEecccCcccCccHHHHHHHHHH-H------HHHHHh-hcCccCCCCcccchhhhhhhhhhcccCCCcccCchhhh Q lcl|Aclame:pro 79 LVQGWVNHAEGDKNPTDEAYRLMADVQ-V------RLGELI-AIDSSSGNPQYPSVYMLENLIAGMRAGPGVCRAPAEGA 150 (179) Q Consensus 79 lvQG~v~~~dd~~nPtD~A~~L~ADv~-k------~La~~~-~~~~~~~n~~~p~v~~l~~~v~~~~ig~~V~Rpp~e~~ 150 (179) -|..|.+. . +|-+.--++|..++ - .|++.+ .+...|.+=. | +|+. T Consensus 63 hI~iyLka-~---~~ds~LD~~~E~~i~~v~~~~~~l~~l~~~~~~~gy~Y~---------------------r--D~e~ 115 (131) T protein:vir:34 63 HIEVFLPA-Q---VPDSELDAWMESRIYPVMSDIPALSDLITSMVASGYDYR---------------------R--DDDA 115 (131) T ss_pred EEEEEeec-C---CCHHHHHHHHHHHhHHHhhcchhhhhHhhhhhhccCCcc---------------------c--cccc Confidence 56677774 3 34433333444322 1 222222 3444444322 1 1221 Q ss_pred ccceEEEEEEEEEEeecc Q lcl|Aclame:pro 151 SGRSYFYLPLNLKIANNT 168 (179) Q Consensus 151 s~~a~F~lpl~l~i~e~~ 168 (179) + ++.-.-|+-+|+=.+ T Consensus 116 ~--tW~sadL~y~ItY~~ 131 (131) T protein:vir:34 116 G--LWSSADLTYVITYEM 131 (131) T ss_pred c--eEEEEEEEEEEEEeC Confidence 1 233333444454444 No 3 >protein:vir:79571 Length: 137 # NCBI annotation: putative tail component # Family: family:all:911 # MgeID: mge:1871 # MgeName: cdtI # Cross-refs: genbank:acc:YP_001272522;genbank:gi:148609391;genbank:GeneID:5204407 Probab=31.95 E-value=1.5 Score=19.68 Aligned_cols=128 Identities=19% Similarity=0.254 Sum_probs=64.4 Q ss_pred CC-----cCchHHHHHHHHHHHhhcccccCceeecccCceeeeeeEecCCCCcceEEecCCcCCCCcCCCCccCceecCc Q lcl|Aclame:pro 1 MQ-----RDPKKLVILKKLTAHLEGVTPTNGFQFDLSSGIYRNRVQFGAETPAPAVSILEAQRPDHGLDADENGQAQSED 75 (179) Q Consensus 1 ~~-----~dpfRl~IlkaLTa~Le~ITiANGY~~Dla~~VfRGR~~fgenDp~P~vsILE~p~pp~~~~a~~s~~~~~~~ 75 (179) |. ..=+|..|+.+|.++|..| -++|-||-.|-|..++|.|++-=.-.-..+..- -.+. T Consensus 1 ~~~~M~iht~IR~~Vid~L~~~l~~~-----------~~ffdGrP~fiDe~ElPAVAV~l~da~~~~~~l------d~~~ 63 (137) T protein:vir:79 1 MADPMNRHTQIRQVVLARLREQCGDS-----------ATFFDGLPAFVDAQELPAVSVWLSDAQYTGKMT------DEDD 63 (137) T ss_pred CCchhHHHHHHHHHHHHHHHhhcCCc-----------EEEeCCccceechhhCcEEEEEeecCCCCccee------cCCe Confidence 21 2337999999999998774 347999988888889999987432212222221 2455 Q ss_pred ce--eEEEEEEecccCcccCccHHHHHHHHHHH-HHHHHhhcCccCCCCcccchhhhhhhhhhccc-CCCcccCchhhhc Q lcl|Aclame:pro 76 WL--LLVQGWVNHAEGDKNPTDEAYRLMADVQV-RLGELIAIDSSSGNPQYPSVYMLENLIAGMRA-GPGVCRAPAEGAS 151 (179) Q Consensus 76 w~--llvQG~v~~~dd~~nPtD~A~~L~ADv~k-~La~~~~~~~~~~n~~~p~v~~l~~~v~~~~i-g~~V~Rpp~e~~s 151 (179) |. |-|..|.+. ..|-+.--++|..+++ ++....+ |.+.+..|.. |=.-=| +++ T Consensus 64 W~A~LhI~iyLka----~~~ds~LD~~~E~~I~~v~~~~~~---------------l~~l~~~~~~~gY~Y~r--D~e-- 120 (137) T protein:vir:79 64 WQAVLHIAVFIRA----QAPDSELDMWMESTIFPALNDVPA---------------LSGLIDTLIPLGFNYQR--DNE-- 120 (137) T ss_pred eEEEEEEEEEeec----CCCHHHHHHHHHHHHHHhhcchhh---------------hhhHhhhhhcccCCccc--ccc-- Confidence 65 556667774 3343333344444332 3322111 1222222211 111112 222 Q ss_pred cceEEEEEEEEEEeeccCC Q lcl|Aclame:pro 152 GRSYFYLPLNLKIANNTTD 170 (179) Q Consensus 152 ~~a~F~lpl~l~i~e~~~~ 170 (179) .-=|...+|+-.-+-+| T Consensus 121 --~~tW~sadL~y~ItYe~ 137 (137) T protein:vir:79 121 --MATWAMAEITYQITYTN 137 (137) T ss_pred --cceeEEEEEEEEEEEcC Confidence 22355555555444444 No 4 >protein:vir:397 Length: 132 # NCBI annotation: gp12 # Family: family:all:911 # MgeID: mge:325 # MgeName: N15 # Cross-refs: genbank:acc:NP_046907;genbank:gi:9630477;genbank:GeneID:1261651 Probab=29.16 E-value=1.7 Score=19.34 Aligned_cols=128 Identities=20% Similarity=0.244 Sum_probs=66.7 Q ss_pred CCcCchHHHHHHHHHHHhhcccccCceeecccCceeeeeeEecCCCCcceEEecCCcCCCCcCCCCccCceecCcce--e Q lcl|Aclame:pro 1 MQRDPKKLVILKKLTAHLEGVTPTNGFQFDLSSGIYRNRVQFGAETPAPAVSILEAQRPDHGLDADENGQAQSEDWL--L 78 (179) Q Consensus 1 ~~~dpfRl~IlkaLTa~Le~ITiANGY~~Dla~~VfRGR~~fgenDp~P~vsILE~p~pp~~~~a~~s~~~~~~~w~--l 78 (179) |+..=+|..|+.+|.++|.++ -++|-||-.|-|+..+|.|++-=.-.-..++.- -.+.|. | T Consensus 1 ~~ht~IR~~Vid~L~~~l~~~-----------~~ffdGrP~fiDe~elPAVAV~l~d~~~~~~~l------d~~~w~A~L 63 (132) T protein:vir:39 1 MKHRDIRKVIIDALESAIGTD-----------AIYFDGRPAVLEEGDFPAVAVYLTDAEYTGEEL------DADTWQAIL 63 (132) T ss_pred CchHHHHHHHHHHHHhhCCCc-----------eEEecCcceeeccccCcEEEEEeecCCCCccee------cCCeeEEEE Confidence 999999999999999999663 358999977777778999987432211222211 234665 5 Q ss_pred EEEEEEecccCcccCccHHHHHHHHHH-HHHHHHhhcCccCCCCcccchhhhhhhhhhccc-CCCcccCchhhhccceEE Q lcl|Aclame:pro 79 LVQGWVNHAEGDKNPTDEAYRLMADVQ-VRLGELIAIDSSSGNPQYPSVYMLENLIAGMRA-GPGVCRAPAEGASGRSYF 156 (179) Q Consensus 79 lvQG~v~~~dd~~nPtD~A~~L~ADv~-k~La~~~~~~~~~~n~~~p~v~~l~~~v~~~~i-g~~V~Rpp~e~~s~~a~F 156 (179) -|..|.+. .+|-+.--+++-.++ -+++ ++-.|++.+..|.. |=.-=| +++. .++. T Consensus 64 hI~iyLka----~~~ds~LD~~aE~~i~p~i~---------------~~~~l~~l~~~~~~~gy~Y~r--D~~~--atW~ 120 (132) T protein:vir:39 64 HIEVFLEA----QVPDSELDDWMETRVYPVLA---------------EVPGLESLITTMVQQGYDYQR--DDDM--ALWS 120 (132) T ss_pred EEEEEeec----CCCHHHHHHHHHHHhHhhhc---------------ccchhhhHhhhhhhcCCCccc--cccc--ceEE Confidence 56667773 445333223332232 1111 11122222222221 111112 1221 2344 Q ss_pred EEEEEEEEeecc Q lcl|Aclame:pro 157 YLPLNLKIANNT 168 (179) Q Consensus 157 ~lpl~l~i~e~~ 168 (179) -.-|+-+|+=.+ T Consensus 121 sadL~y~ItY~~ 132 (132) T protein:vir:39 121 SADLKYSITYDM 132 (132) T ss_pred EEEEEEEEEEeC Confidence 445555666566 No 5 >protein:vir:99226 Length: 157 # NCBI annotation: hypothetical protein # Family: family:all:2406 # MgeID: mge:1649 # MgeName: DMS3 # Cross-refs: genbank:acc:YP_950461;genbank:gi:119953662;genbank:GeneID:4643086 Probab=11.43 E-value=5.6 Score=16.48 Aligned_cols=143 Identities=18% Similarity=0.335 Sum_probs=64.9 Q ss_pred CCcCchHH-----HHHHHHHHHhhcccccCceeecccCceeeeeeEecCC-CCcceEEecCCcCCCCcCCCCccCceecC Q lcl|Aclame:pro 1 MQRDPKKL-----VILKKLTAHLEGVTPTNGFQFDLSSGIYRNRVQFGAE-TPAPAVSILEAQRPDHGLDADENGQAQSE 74 (179) Q Consensus 1 ~~~dpfRl-----~IlkaLTa~Le~ITiANGY~~Dla~~VfRGR~~fgen-Dp~P~vsILE~p~pp~~~~a~~s~~~~~~ 74 (179) |+ |||=+ -|+..|.+.+.++-.. +=..|++. +-+. ..-|++=++-.-. ...+..+...+++ T Consensus 1 ~~-~~~d~~a~~~~IierLka~vp~l~~V-~~aadla~--------i~~~~q~tPaayVi~~gd---~~~~~~~~~~~~~ 67 (157) T protein:vir:99 1 MS-DPFDYLFLEPLLIERIRSEVPGLAIV-SGVPDLAA--------LSEQDQPAPSVYVVYLGD---EIGTGADHQGGRR 67 (157) T ss_pred CC-CchhhhhhhHHHHHHHHhhhhHHHhh-hcccchHH--------HhhccCCCcEEEEEeccc---ccCCCcccccccc Confidence 65 77653 4555554443333211 11223322 1221 2346666653221 0122223334555 Q ss_pred cceeEEEEEE---ecc--cC---cccCccHHHHHHHHHHHHHHHHhhcCccCCCCcccchhhhhhhhhhcccCCCcccCc Q lcl|Aclame:pro 75 DWLLLVQGWV---NHA--EG---DKNPTDEAYRLMADVQVRLGELIAIDSSSGNPQYPSVYMLENLIAGMRAGPGVCRAP 146 (179) Q Consensus 75 ~w~llvQG~v---~~~--dd---~~nPtD~A~~L~ADv~k~La~~~~~~~~~~n~~~p~v~~l~~~v~~~~ig~~V~Rpp 146 (179) .|..+-|.|- .++ ++ -..=.|.|+.|++.|+++|.=-. +..+..| |+.. .+ + T Consensus 68 ~~Q~i~q~~~Vvlavr~~~~~~~g~~a~d~ag~ll~~v~~AL~GW~--P~~~~~p--------------l~~~---~~-~ 127 (157) T protein:vir:99 68 AIQAIGQQWAVVLVVHYADSSNSGEGARREAGPLLGRLVKALTGWA--PAIDVAP--------------LARS---AR-Q 127 (157) T ss_pred eeeeeeeeEEEEEEEeccccccccchhHHHHHHHHHHHHHHhcCCc--CcccCCc--------------eeee---ec-C Confidence 5666666652 221 21 11234779999999999996211 1122222 1111 01 2 Q ss_pred hhhhccceEEEEEEEEEEeeccCCchhhccCCC Q lcl|Aclame:pro 147 AEGASGRSYFYLPLNLKIANNTTDPYDLLPYRP 179 (179) Q Consensus 147 ~e~~s~~a~F~lpl~l~i~e~~~~Py~~~~~~~ 179 (179) +....+.-|+|+|+...+. ..-| .+-.+.| T Consensus 128 ~~~~y~~gf~yypl~F~~~--~~~~-~~~~~~~ 157 (157) T protein:vir:99 128 SPVTYASGYFYFPLVFTAR--FVYP-RVKSWKP 157 (157) T ss_pred CcccccCceEEEEEEEEEe--eecc-ccccCCC Confidence 2234566788888887773 3333 1233455 No 6 >protein:vir:79247 Length: 157 # NCBI annotation: hypothetical protein # Family: family:all:2406 # MgeID: mge:1867 # MgeName: Phage MP22 # Cross-refs: genbank:acc:YP_001469166;genbank:gi:157835008;genbank:GeneID:5648828 Probab=8.94 E-value=7.3 Score=15.83 Aligned_cols=146 Identities=18% Similarity=0.265 Sum_probs=64.1 Q ss_pred CCcCchHH-HHHHHHHHHhh-cccccCceeecccCceeeeeeEecCC-CCcceEEecCCcCCCCcCCCCccCceecCcce Q lcl|Aclame:pro 1 MQRDPKKL-VILKKLTAHLE-GVTPTNGFQFDLSSGIYRNRVQFGAE-TPAPAVSILEAQRPDHGLDADENGQAQSEDWL 77 (179) Q Consensus 1 ~~~dpfRl-~IlkaLTa~Le-~ITiANGY~~Dla~~VfRGR~~fgen-Dp~P~vsILE~p~pp~~~~a~~s~~~~~~~w~ 77 (179) |+ |||=+ -+-+.|.++|+ .+. ++. -+++..=..-+ -+. ...|++=++-.-. ...+..+++.+++.|. T Consensus 1 ~~-~~~d~~a~~~~IierLka~v~---~l~-~V~~aadla~i--~e~~q~tPaayVv~~gd---~~~~~~~~~~~~~~~Q 70 (157) T protein:vir:79 1 MS-DPFDYLFLEPLLIERIRSEVP---GLA-IVSGVPDLAAL--SEQDQPAPSVYVVYLGD---EIGTGADYQGGRRAIQ 70 (157) T ss_pred CC-CchhhhhhhHHHHHHHHhhhh---hhh-hhccccchhhh--hhhcCCCcEEEEEeccc---ccCCCcccccCcceee Confidence 65 77653 33355555554 221 111 11111100011 122 2357666652221 1122233334444555 Q ss_pred eEEEEEEe-----ccc-Cccc--CccHHHHHHHHHHHHHHHHhhcCccCCCCcccchhhhhhhhhhcccCCCcccCchhh Q lcl|Aclame:pro 78 LLVQGWVN-----HAE-GDKN--PTDEAYRLMADVQVRLGELIAIDSSSGNPQYPSVYMLENLIAGMRAGPGVCRAPAEG 149 (179) Q Consensus 78 llvQG~v~-----~~d-d~~n--PtD~A~~L~ADv~k~La~~~~~~~~~~n~~~p~v~~l~~~v~~~~ig~~V~Rpp~e~ 149 (179) .+-|.|-. +.+ .++. =.|.|+.|++.|+++|.=-. ...+..|. .++ ++ ++.. T Consensus 71 ~vtq~f~Vvlavrn~~~~~~~~a~~d~ag~ll~~v~~AL~GW~--P~~~~~pl------------~~~-~~-----~~~~ 130 (157) T protein:vir:79 71 AIGQQWAVVLVVHYADSSNSGEGARREAGPLLGRLVKALTGWA--PAIDVAPL------------ARS-AR-----QSPV 130 (157) T ss_pred eeeeeEEEEEEEeccccccccchhHHHHHHHHHHHHHHhcCcc--ccccCCce------------eee-ec-----CCcc Confidence 55555532 111 1222 24689999999999996221 11222221 111 11 2223 Q ss_pred hccceEEEEEEEEEEeeccCCchhhccCCC Q lcl|Aclame:pro 150 ASGRSYFYLPLNLKIANNTTDPYDLLPYRP 179 (179) Q Consensus 150 ~s~~a~F~lpl~l~i~e~~~~Py~~~~~~~ 179 (179) ..+.-|+|+|+...+ +.--| .+-.+.| T Consensus 131 ~y~~gf~yypl~F~~--~~~~~-~~~~~~~ 157 (157) T protein:vir:79 131 TYASGYFYFPLVFTA--RFVYP-RVKSWKP 157 (157) T ss_pred cccCCeEEEEEEEEE--eeecc-ccccCCC Confidence 456678888888777 33333 1234555 No 7 >protein:vir:81066 Length: 118 # NCBI annotation: p13 # Family: family:all:3244 # MgeID: mge:1889 # MgeName: Xop411 # Cross-refs: genbank:acc:YP_001285683;genbank:gi:148727191;genbank:GeneID:5247111 Probab=2.32 E-value=29 Score=12.56 Aligned_cols=117 Identities=15% Similarity=0.114 Sum_probs=54.8 Q ss_pred HHHHHHHHHHhhcccccCceeecccCceeeeeeEecCCCCc-ceEEecCCcCCCCcCCCCccCceecCcceeEEEEEEec Q lcl|Aclame:pro 8 LVILKKLTAHLEGVTPTNGFQFDLSSGIYRNRVQFGAETPA-PAVSILEAQRPDHGLDADENGQAQSEDWLLLVQGWVNH 86 (179) Q Consensus 8 l~IlkaLTa~Le~ITiANGY~~Dla~~VfRGR~~fgenDp~-P~vsILE~p~pp~~~~a~~s~~~~~~~w~llvQG~v~~ 86 (179) ..+=..|++.|..+- +++||.+..- ++.+. |-++.-----.| ...-..+-..+.+.++-|--|+.+ T Consensus 1 Ms~e~~l~a~L~~~~---------~~Rvyp~~aP--~~~~~~Pyiv~q~vsg~p--~~~l~G~~~~~~~~rvQIdvyA~t 67 (118) T protein:vir:81 1 MSYGRVLKDLLDPVF---------SGRVYADIPP--DSPPLDAYAIYQRVGGVP--VYWQEGGMPEKVNARVQIQIWSRS 67 (118) T ss_pred CchHHHHHHHHHhhc---------CCccccccCC--CCCccCceEEEEecCCcc--cccccCCCCCccceeEEEEEeeCC Confidence 334456666665443 5678876554 34454 766653322111 111111112233455555566663 Q ss_pred ccCcccCccHHHHHHHHHHHHHHHHhhcCccCCCCcccchhhhhhhhhhcccCCCcccCchhhhccceEEEEEEEEEEee Q lcl|Aclame:pro 87 AEGDKNPTDEAYRLMADVQVRLGELIAIDSSSGNPQYPSVYMLENLIAGMRAGPGVCRAPAEGASGRSYFYLPLNLKIAN 166 (179) Q Consensus 87 ~dd~~nPtD~A~~L~ADv~k~La~~~~~~~~~~n~~~p~v~~l~~~v~~~~ig~~V~Rpp~e~~s~~a~F~lpl~l~i~e 166 (179) -+.|..|+..|+++|.....+-+.+.. +.++.-....+| ..+.+.|-- T Consensus 68 -------~~~A~~l~~av~~al~~~~~~~~~~~~------------~d~ye~dt~l~r-------------~~~Df~iw~ 115 (118) T protein:vir:81 68 -------KQEAYLATVQVLRLVSEAPDMQVLSQP------------IDDYVREIKLYG-------------SRVDVSMWY 115 (118) T ss_pred -------HHHHHHHHHHHHHHhhhccceeeccCC------------ccccccccCcee-------------EEEEEEEEe Confidence 467999999999999654333222211 111222223333 233333333 Q ss_pred ccC Q lcl|Aclame:pro 167 NTT 169 (179) Q Consensus 167 ~~~ 169 (179) +++ T Consensus 116 ~~~ 118 (118) T protein:vir:81 116 PIT 118 (118) T ss_pred cCC Confidence 333 No 8 >protein:vir:99874 Length: 154 # NCBI annotation: hypothetical protein # Family: family:all:964 # MgeID: mge:1480 # MgeName: B3 # Cross-refs: genbank:acc:YP_164078;genbank:gi:56692610;genbank:GeneID:3192602 Probab=1.58 E-value=35 Score=12.08 Aligned_cols=52 Identities=12% Similarity=0.026 Sum_probs=30.1 Q ss_pred CCcCchHHHHHHHHHHHh-------hcccccCceeecccCceeeeeeEecCCCCcceEE Q lcl|Aclame:pro 1 MQRDPKKLVILKKLTAHL-------EGVTPTNGFQFDLSSGIYRNRVQFGAETPAPAVS 52 (179) Q Consensus 1 ~~~dpfRl~IlkaLTa~L-------e~ITiANGY~~Dla~~VfRGR~~fgenDp~P~vs 52 (179) -.-+++|-.|.++|.==. .-|+-+.|.--|+.++...=+..|.-+++++-=+ T Consensus 96 d~l~~lr~~v~~AL~GW~P~~~~G~~pi~~~gG~l~d~~~g~l~y~~~F~~~~~lgr~~ 154 (154) T protein:vir:99 96 DDLRPVLGDVRKALIGWTPPGLAGARDCQLVQGQVVDYDASVLIWTDLYQTQHAIGRTS 154 (154) T ss_pred HHHHHHHHHHHHHHhCCCCCcccCCceeeecCcceeeccCcEEEEeeeeeeeeecCCCC Confidence 112345555555554222 2255567777777776666667777777776655 No 9 >protein:vir:80036 Length: 111 # NCBI annotation: gp10 # Family: family:all:3186 # MgeID: mge:1876 # MgeName: B054 # Cross-refs: genbank:acc:YP_001468714;genbank:gi:157325294;genbank:GeneID:5601727 Probab=1.39 E-value=17 Score=13.79 Aligned_cols=65 Identities=20% Similarity=0.085 Sum_probs=27.1 Q ss_pred CCcC----chHHHHHHHHHHHhhcccccCceeecccCceeeeeeEecCCCCcceEEecCCcCCC-CcCCCCccCceecCc Q lcl|Aclame:pro 1 MQRD----PKKLVILKKLTAHLEGVTPTNGFQFDLSSGIYRNRVQFGAETPAPAVSILEAQRPD-HGLDADENGQAQSED 75 (179) Q Consensus 1 ~~~d----pfRl~IlkaLTa~Le~ITiANGY~~Dla~~VfRGR~~fgenDp~P~vsILE~p~pp-~~~~a~~s~~~~~~~ 75 (179) ++.| ||+-++.++|++||..+. |+|-..=-|..||..-.. .+...-.+++.++.= T Consensus 34 ~~a~gFp~~~~e~a~rYLa~HLat~~--------------------~~~v~sE~V~~Lk~~Y~~~~~~~~l~~s~wGq~Y 93 (111) T protein:vir:80 34 VQEKGFPEKFEERANRYLAAHLATLA--------------------NKNVKSEAVGSLKREYYEVKGDSGLLSTEYGQEY 93 (111) T ss_pred hhcCCCChhHHHHHHHHHHHHHHHhc--------------------CCCCchhhhhhHHHHhhhcccccccccchhHHHH Confidence 5554 567788999999998873 222222223333333211 011111222222222 Q ss_pred ceeEEE--------EEEe Q lcl|Aclame:pro 76 WLLLVQ--------GWVN 85 (179) Q Consensus 76 w~llvQ--------G~v~ 85 (179) |+|+=+ +.|. T Consensus 94 ~rL~k~~~~gs~~~~vVv 111 (111) T protein:vir:80 94 ARLLKEANGGSGISMVVV 111 (111) T ss_pred HHHHHHhcCCccceeeeC Confidence 222211 1111 No 10 >protein:vir:9514 Length: 135 # NCBI annotation: hypothetical protein # Family: family:all:508 # MgeID: mge:170 # MgeName: phiN315 # Cross-refs: genbank:acc:NP_835561;genbank:gi:30043946;genbank:GeneID:1260543 Probab=1.19 E-value=54 Score=11.02 Aligned_cols=45 Identities=13% Similarity=0.229 Sum_probs=27.1 Q ss_pred CCcC---chHHHHHHHHHHHh-hcc---cccCc---eeecccC----ceeeeeeEecCCC Q lcl|Aclame:pro 1 MQRD---PKKLVILKKLTAHL-EGV---TPTNG---FQFDLSS----GIYRNRVQFGAET 46 (179) Q Consensus 1 ~~~d---pfRl~IlkaLTa~L-e~I---TiANG---Y~~Dla~----~VfRGR~~fgenD 46 (179) -+.- .-|.+|-+.|..-| +++ ..+|| |..|..- +-|||- .+.++. T Consensus 77 ~~~~~~R~~~~~i~~~I~~~l~~~~~f~q~s~~ldeY~~et~~y~~aRRYrG~-~Y~~e~ 135 (135) T protein:vir:95 77 NDEYNARIIRNKISNRIQKLLWSELKMGNVSNGKPEYIEEFKTYRSSRVYEGI-FYKEEN 135 (135) T ss_pred ccccchhhHHHHHHHHHHHHHHHHcCccccCCCCccchhhhhhhhhhheeeee-cccCCC Confidence 1111 23667777777777 554 55666 6777654 889996 444443 Done!