Query lcl|Aclame:protein:vir:5658|NCBI_annot:gp14|genbank:acc:NP_899597;genbank:gi:34419584;genbank:GeneID:2545699 Match_columns 278 No_of_seqs 34 out of 38 Neff 3.7 Searched_HMMs 1612 Date Sun Dec 1 04:23:27 2013 Command /home/guerois/workspace/virfam/python/lib/hhsearch//hhsearch2 -i .//seq/seq_349 -d /home/guerois/workspace/virfam/python/profile_database/capsid_neck_tail.hhm -glob -cpu 7 -o .//seq/HHR/seq_349_vs_rec_db.hhr No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM 1 protein:vir:5658 Length: 278 # 100.0 2E-147 1E-150 825.4 21.5 278 1-278 1-278 (278) 2 protein:vir:7199 Length: 256 # 100.0 1E-128 6E-132 722.3 19.4 256 1-267 1-256 (256) 3 protein:vir:103452 Length: 256 100.0 2E-128 1E-131 720.6 19.4 256 1-267 1-256 (256) 4 protein:vir:6890 Length: 254 # 100.0 8E-129 5E-132 722.8 16.9 254 1-267 1-254 (254) 5 protein:vir:107937 Length: 257 100.0 2E-127 1E-130 715.7 17.1 257 1-268 1-257 (257) 6 protein:vir:106285 Length: 262 100.0 7E-126 4E-129 706.8 18.6 259 1-278 1-259 (262) 7 protein:vir:101154 Length: 252 100.0 7E-126 4E-129 706.7 17.6 252 3-266 1-252 (252) 8 protein:vir:101800 Length: 252 100.0 7E-126 4E-129 706.7 17.6 252 3-266 1-252 (252) 9 protein:vir:98258 Length: 248 100.0 1E-125 7E-129 705.7 17.7 248 1-260 1-248 (248) 10 protein:vir:80995 Length: 246 100.0 3E-124 2E-127 697.7 17.4 246 3-278 1-246 (246) 11 protein:vir:6590 Length: 246 # 100.0 4E-124 3E-127 696.8 17.4 246 3-278 1-246 (246) 12 protein:vir:100535 Length: 253 100.0 1E-123 7E-127 694.5 18.5 253 3-271 1-253 (253) 13 protein:vir:104476 Length: 308 100.0 1E-110 7E-114 623.4 17.8 257 1-278 1-300 (308) 14 protein:vir:106986 Length: 292 100.0 6E-106 4E-109 597.4 18.1 242 28-278 1-285 (292) 15 protein:vir:103005 Length: 390 100.0 3E-100 2E-103 566.0 17.8 258 13-278 1-278 (390) 16 protein:vir:104739 Length: 470 100.0 7E-86 4.4E-89 487.4 17.1 235 28-278 1-270 (470) 17 protein:vir:1385 Length: 107 # 33.2 1.4 0.00085 19.8 9.7 106 56-178 1-107 (107) 18 protein:vir:97237 Length: 122 32.5 1.4 0.00088 19.8 11.0 121 30-176 1-122 (122) 19 protein:vir:95373 Length: 101 26.7 1.1 0.00065 20.5 3.8 95 111-220 1-101 (101) 20 protein:vir:80114 Length: 101 21.0 1.7 0.0011 19.3 3.8 95 111-220 1-101 (101) No 1 >protein:vir:5658 Length: 278 # NCBI annotation: gp14 # Family: family:all:1104 # MgeID: mge:119 # MgeName: KVP40 # Cross-refs: genbank:acc:NP_899597;genbank:gi:34419584;genbank:GeneID:2545699 Probab=100.00 E-value=1.6e-147 Score=825.36 Aligned_cols=278 Identities=100% Similarity=1.559 Sum_probs=277.6 Q ss_pred CcceecCCceEEEEecCCcchhhhhhcccccceeecCCcchhHHHHHHHHHHHHHhcCeeEEEeeeeecccccccccccc Q lcl|Aclame:pro 1 MGAYDTNTGGMFAKLESQKGYDQIYNNHLVNPYFNWVNHTNEQNLTDMLVAESIINRGVECVYLRREMEKVDLVFGEDPM 80 (278) Q Consensus 1 ~~~~~~~~~~~fa~le~~~gy~~~~~~~~~npyfN~~g~~~eQ~L~~~LV~E~Iqm~G~dvyYlPRe~v~~D~v~~E~~~ 80 (278) |+||||+|||||||||+++||++||+++|+|||||++||++||+|+|+||+|||||||+|||||||++|++|+||+|+++ T Consensus 1 m~~~d~~~~~lfa~l~~~~gy~~~~~~~~~NpYfn~~~~~~eQ~L~e~LV~EsIqm~GvdvyYlPRe~v~~D~i~~Ed~~ 80 (278) T protein:vir:56 1 MGAYDTNTGGMFAKLESQKGYDQIYNNHLVNPYFNWVNHTNEQNLTDMLVAESIINRGVECVYLRREMEKVDLVFGEDPM 80 (278) T ss_pred CccccccCceEEEEecCCcccchhcccccccceeeccCCCchhHHHHHHHHHHHHHcCceEEEcchhhhccccccccccc Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred ccccceeeeeeeehhhhccCCCcceeeecCceeeeeEEEEEcchhhhhccCCCCCccccEEEecCCCceEEEEeeccCCc Q lcl|Aclame:pro 81 SKFTQNFRMSLYVESFEGWDGDGDWYSKFGFQVNDEMNVCINPKLFAQQGDGKQPLMGDLIYFPLANSLFEISWIEREDP 160 (278) Q Consensus 81 skF~~a~~ieaYl~n~eGf~g~gd~~SKFG~~~~DE~Tf~IS~~rF~~~v~~~rP~EGDLIYfP~~n~lFEI~~VE~e~P 160 (278) |||++||+|||||+||+||+|+++||||||||++|||||+|||+||+++++++||+|||||||||+|+||||+||||++| T Consensus 81 skF~ka~~ieaYl~~~egy~G~~d~~SKFG~~~~DEvt~~Is~~rF~~~~~~~rP~EGDLIYfPm~n~LFEI~~VE~~~P 160 (278) T protein:vir:56 81 SKFTQNFRMSLYVESFEGWDGDGDWYSKFGFQVNDEMNVCINPKLFAQQGDGKQPLMGDLIYFPLANSLFEISWIEREDP 160 (278) T ss_pred cccccceeEEEEeehhhccCCCceeeeecCceecceEEEEEccchhhhcCCCCCCccccEEEEcCCCcEEEEEccCCCCc Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred hhhcCCceEEEEEEEEeecCCceecccCcccccccchhhhhcccccccccccccccccCCceeccccccccccccccccc Q lcl|Aclame:pro 161 WYMNGVLPMRKMKMTKFVYSGEEINLEKPEAVIDSIDDILNFGEDTDEMIDIDKINALDGRWDIGIEQGAEITQIEDEVD 240 (278) Q Consensus 161 FYQ~Gk~yv~~l~ce~F~Ys~E~idTg~pe~~id~i~~i~~~~e~~~~~id~~~i~~~~G~~d~~~~~~~e~~~~~~e~~ 240 (278) |||+||+|||+|+|+||+||+|+||||+|+++||+|++|++++|+++++||++++++++|++|++++++++++++++||+ T Consensus 161 FYQ~Gk~~~~~l~ce~F~Ys~E~~dtg~pe~~~d~i~~i~ef~e~~~~~ld~~~~~~l~G~~di~~~~~~e~~~~~~e~~ 240 (278) T protein:vir:56 161 WYMNGVLPMRKMKMTKFVYSGEEINLEKPEAVIDSIDDILNFGEDTDEMIDIDKINALDGRWDIGIEQGAEITQIEDEVD 240 (278) T ss_pred hhhhCCceEEEEEEEEeeecCceecccCCccccccccchhhcccchhhcccccccccccchhcccchhhhhhhhhhhccc Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred eeeecccceeccCCccceecccCCcccCccccccccCC Q lcl|Aclame:pro 241 KFYESEQVVPSGSDVQPTDPRNATIGFNVNNSNPFDSF 278 (278) Q Consensus 241 ~~~~~~~~~~~~~~~~~t~~~~~~~~~~v~~~~~fd~~ 278 (278) +|++|+.+++++|+++||.|+++|+++||++||||||| T Consensus 241 ~f~~~~~v~~~~~~~~~t~~~n~~~g~~v~~~~~~D~f 278 (278) T protein:vir:56 241 KFYESEQVVPSGSDVQPTDPRNATIGFNVNNSNPFDSF 278 (278) T ss_pred eeeecCceecCCCCccccCcccccCCCcCccccccccC Confidence 99999999999999999999999999999999999999 No 2 >protein:vir:7199 Length: 256 # NCBI annotation: gp14 neck protein # Family: family:all:1104 # MgeID: mge:142 # MgeName: T4 # Cross-refs: genbank:acc:NP_049773;genbank:gi:9632588;genbank:GeneID:1258695 Probab=100.00 E-value=1e-128 Score=722.33 Aligned_cols=256 Identities=45% Similarity=0.779 Sum_probs=247.8 Q ss_pred CcceecCCceEEEEecCCcchhhhhhcccccceeecCCcchhHHHHHHHHHHHHHhcCeeEEEeeeeecccccccccccc Q lcl|Aclame:pro 1 MGAYDTNTGGMFAKLESQKGYDQIYNNHLVNPYFNWVNHTNEQNLTDMLVAESIINRGVECVYLRREMEKVDLVFGEDPM 80 (278) Q Consensus 1 ~~~~~~~~~~~fa~le~~~gy~~~~~~~~~npyfN~~g~~~eQ~L~~~LV~E~Iqm~G~dvyYlPRe~v~~D~v~~E~~~ 80 (278) |+|||+| ||||||+++||++|++++|+|||||++||++||+|+|+||+|||||||+|||||||++|++|+||+|+++ T Consensus 1 m~~~d~~---lfa~l~~~~gy~~~~~~~~lNPYfn~~~~~~eQ~L~e~LV~EsIqm~GvdvyYlpRe~v~~D~i~~Ed~~ 77 (256) T protein:vir:71 1 MATYDKN---LFAKLENRTGYSQTNETEILNPYVNFNHYKNSQILADVLVAESIQMRGVECYYVPREYVSPDLIFGEDLK 77 (256) T ss_pred Ccccccc---eeeeecCCcchhhhhhhcccceeeeeeccCchhhHHHHHHHHHHHHcCceEEEechhhcccccccccccc Confidence 9999999 9999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred ccccceeeeeeeehhhhccCCCcceeeecCceeeeeEEEEEcchhhhhccCCCCCccccEEEecCCCceEEEEeeccCCc Q lcl|Aclame:pro 81 SKFTQNFRMSLYVESFEGWDGDGDWYSKFGFQVNDEMNVCINPKLFAQQGDGKQPLMGDLIYFPLANSLFEISWIEREDP 160 (278) Q Consensus 81 skF~~a~~ieaYl~n~eGf~g~gd~~SKFG~~~~DE~Tf~IS~~rF~~~v~~~rP~EGDLIYfP~~n~lFEI~~VE~e~P 160 (278) |||++||+|||||+||+||+|+++||||||||++|||||+|||+||+++++++||+|||||||||+|+||||+||||++| T Consensus 78 skF~ka~~ieaYl~~~egy~G~~d~~SKFG~~~~DEvt~~Is~~rF~~~v~~~rP~EGDLIYfPm~n~LFEI~~VE~~~P 157 (256) T protein:vir:71 78 NKFTKAWKFAAYLNSFEGYEGAKSFFSNFGMQVQDEVTLSINPNLFKHQVNGKEPKEGDLIYFPMDNSLFEINWVEPYDP 157 (256) T ss_pred cccccceeEEEEeehhhccCCccccceecCceecceEEEEEccchhhhhhcCCCCccccEEEEcCCCcEEEEEcccCCCc Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred hhhcCCceEEEEEEEEeecCCceecccCcccccccchhhhhcccccccccccccccccCCceeccccccccccccccccc Q lcl|Aclame:pro 161 WYMNGVLPMRKMKMTKFVYSGEEINLEKPEAVIDSIDDILNFGEDTDEMIDIDKINALDGRWDIGIEQGAEITQIEDEVD 240 (278) Q Consensus 161 FYQ~Gk~yv~~l~ce~F~Ys~E~idTg~pe~~id~i~~i~~~~e~~~~~id~~~i~~~~G~~d~~~~~~~e~~~~~~e~~ 240 (278) |||+||||||+|+|+||+||+|+|+||+++ +|+|. +.++++ ||+++|++++|++|+|+.++++++++++|++ T Consensus 158 FYQ~Gkn~~~~l~ce~F~Ys~E~~~~~l~~--~d~i~-~~e~~e-----ldl~~i~~ldg~~di~~~~~~e~~~i~~e~~ 229 (256) T protein:vir:71 158 FYQLGQNAIRKITAGKFIYSGEEINPVLQK--NEGIN-IPEFSE-----LELNAVRNLNGIHDINIDQYAEVDQINSEAK 229 (256) T ss_pred hhhhCCCeEEEEEEEEEecCCceecccCCC--CCccc-CCcccc-----cccccccccCcccccccccccchhhhhhccc Confidence 999999999999999999999999999866 77774 667777 9999999999999999999999999999999 Q ss_pred eeeecccceeccCCccceecccCCccc Q lcl|Aclame:pro 241 KFYESEQVVPSGSDVQPTDPRNATIGF 267 (278) Q Consensus 241 ~~~~~~~~~~~~~~~~~t~~~~~~~~~ 267 (278) +|++|+.+++++|++.+++|+++.+-- T Consensus 230 ~~ve~~~~in~~G~~~~~~pfd~~~~~ 256 (256) T protein:vir:71 230 EYVEPYVVVNNRGKSFESSPFDNDFMD 256 (256) T ss_pred cccccceeecCCCCCCcCCCccccccC Confidence 999999999999998888888777743 No 3 >protein:vir:103452 Length: 256 # NCBI annotation: head completion # Family: family:all:1104 # MgeID: mge:1542 # MgeName: RB32 # Cross-refs: genbank:acc:YP_803104;genbank:gi:116326384;genbank:GeneID:4405481 Probab=100.00 E-value=2.1e-128 Score=720.61 Aligned_cols=256 Identities=45% Similarity=0.778 Sum_probs=247.5 Q ss_pred CcceecCCceEEEEecCCcchhhhhhcccccceeecCCcchhHHHHHHHHHHHHHhcCeeEEEeeeeecccccccccccc Q lcl|Aclame:pro 1 MGAYDTNTGGMFAKLESQKGYDQIYNNHLVNPYFNWVNHTNEQNLTDMLVAESIINRGVECVYLRREMEKVDLVFGEDPM 80 (278) Q Consensus 1 ~~~~~~~~~~~fa~le~~~gy~~~~~~~~~npyfN~~g~~~eQ~L~~~LV~E~Iqm~G~dvyYlPRe~v~~D~v~~E~~~ 80 (278) |+|||+| ||||||+++||++|++++|+|||||++||++||+|+|+||+|||||||+|||||||++|++|+||+|+++ T Consensus 1 m~~~d~~---lfa~l~~~~gy~~~~~~~~lNPYfn~~~~~~eQ~L~e~LV~EsIqm~GvdvyYlPRe~v~~D~i~~Ed~~ 77 (256) T protein:vir:10 1 MATYDKN---LFAKLENHTGYSQTNETEILNPYVNFNHYKNSQILADVLVAESIQMRGVECYYVPREYVSPDLIFGEDLK 77 (256) T ss_pred Ccccccc---eeeeecCCcchhhhhhhcccceeeeeeccCchhhHHHHHHHHHHHHcCceEEEechhhcccccccccccc Confidence 9999999 9999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred ccccceeeeeeeehhhhccCCCcceeeecCceeeeeEEEEEcchhhhhccCCCCCccccEEEecCCCceEEEEeeccCCc Q lcl|Aclame:pro 81 SKFTQNFRMSLYVESFEGWDGDGDWYSKFGFQVNDEMNVCINPKLFAQQGDGKQPLMGDLIYFPLANSLFEISWIEREDP 160 (278) Q Consensus 81 skF~~a~~ieaYl~n~eGf~g~gd~~SKFG~~~~DE~Tf~IS~~rF~~~v~~~rP~EGDLIYfP~~n~lFEI~~VE~e~P 160 (278) |||++||+|||||+||+||+|+++||||||||++|||||+|||+||+++++++||+|||||||||+|+||||+||||++| T Consensus 78 skF~ka~~ieaYl~~~egy~G~~d~~SKFG~~~~DEvt~~Is~~rF~~~v~~~rP~EGDLIYfPm~n~LFEI~~VE~~~P 157 (256) T protein:vir:10 78 NKFTKAWKFAAYLNSFEGYEGAKSFFSNFGMQVQDEVTLSINPNLFKHQVNGKEPKEGDLIYFPMDNSLFEINWVEPYDP 157 (256) T ss_pred cccccceeEEEEeehhhccCCccccceecCceecceEEEEEcCchhhhhccCCCCccccEEEEcCCCcEEEEEeccCCCc Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred hhhcCCceEEEEEEEEeecCCceecccCcccccccchhhhhcccccccccccccccccCCceeccccccccccccccccc Q lcl|Aclame:pro 161 WYMNGVLPMRKMKMTKFVYSGEEINLEKPEAVIDSIDDILNFGEDTDEMIDIDKINALDGRWDIGIEQGAEITQIEDEVD 240 (278) Q Consensus 161 FYQ~Gk~yv~~l~ce~F~Ys~E~idTg~pe~~id~i~~i~~~~e~~~~~id~~~i~~~~G~~d~~~~~~~e~~~~~~e~~ 240 (278) |||+||||||+|+|+||+||+|+|+||+++ +|+|. +.++++ ||++|+++++|++|+|+.++++++++++|++ T Consensus 158 FYQ~Gkn~~~~l~ce~F~Ys~E~~~~~l~~--~d~i~-~~~~~e-----ldl~pi~~ldG~~di~~~~~~e~~~~~~e~~ 229 (256) T protein:vir:10 158 FYQLGQNAIRKITAGKFIYSGEEINPVLQK--NEGIN-IPEFSE-----LELNPVRNLNGIHDINIDQYAEVDQINSEAK 229 (256) T ss_pred hhhhCCCeEEEEEEEEEeeCCceecccCCC--Ccccc-CCccch-----hhhccccccccccccCccccccchhhhhccc Confidence 999999999999999999999999999866 77664 667777 9999999999999999999999999999999 Q ss_pred eeeecccceeccCCccceecccCCccc Q lcl|Aclame:pro 241 KFYESEQVVPSGSDVQPTDPRNATIGF 267 (278) Q Consensus 241 ~~~~~~~~~~~~~~~~~t~~~~~~~~~ 267 (278) .|++|+.+++++|++.+++|+++.+-- T Consensus 230 ~~v~~~~~in~~G~~~~~~pfd~~~~~ 256 (256) T protein:vir:10 230 EYVEPYVVVNNRGKSFESSPFDNDFMD 256 (256) T ss_pred cccccceEecCCCCCCcCCCccccccC Confidence 999999999999998888888777743 No 4 >protein:vir:6890 Length: 254 # NCBI annotation: gp14 neck protein # Family: family:all:1104 # MgeID: mge:140 # MgeName: RB69 # Cross-refs: genbank:acc:NP_861866;genbank:gi:32453657;genbank:GeneID:1494292 Probab=100.00 E-value=8.1e-129 Score=722.84 Aligned_cols=254 Identities=43% Similarity=0.785 Sum_probs=243.7 Q ss_pred CcceecCCceEEEEecCCcchhhhhhcccccceeecCCcchhHHHHHHHHHHHHHhcCeeEEEeeeeecccccccccccc Q lcl|Aclame:pro 1 MGAYDTNTGGMFAKLESQKGYDQIYNNHLVNPYFNWVNHTNEQNLTDMLVAESIINRGVECVYLRREMEKVDLVFGEDPM 80 (278) Q Consensus 1 ~~~~~~~~~~~fa~le~~~gy~~~~~~~~~npyfN~~g~~~eQ~L~~~LV~E~Iqm~G~dvyYlPRe~v~~D~v~~E~~~ 80 (278) |+|||+| ||||||+++||++|++++|+|||||++||++||+|+|+||+|||||||+|||||||++|++|+||+|+++ T Consensus 1 m~~~d~~---lfa~le~~~gy~~t~~~~~lNPYfn~~~~~~eQ~L~e~LV~EsIqm~GvdvyYlPRe~v~~D~i~~Ed~~ 77 (254) T protein:vir:68 1 MATYDKN---LFAKLENRGGYSQTNETEILNPFVNFNNYENSQTLADVLVAESIQMRGIECFYVPREYVAVDLIFGEDLK 77 (254) T ss_pred Ccccccc---eeeeecCCcchhhhhhccccceeEEeeccCchhHHHHHHHHHHHHHcCceEEEechhhhccccccccccc Confidence 9999999 9999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred ccccceeeeeeeehhhhccCCCcceeeecCceeeeeEEEEEcchhhhhccCCCCCccccEEEecCCCceEEEEeeccCCc Q lcl|Aclame:pro 81 SKFTQNFRMSLYVESFEGWDGDGDWYSKFGFQVNDEMNVCINPKLFAQQGDGKQPLMGDLIYFPLANSLFEISWIEREDP 160 (278) Q Consensus 81 skF~~a~~ieaYl~n~eGf~g~gd~~SKFG~~~~DE~Tf~IS~~rF~~~v~~~rP~EGDLIYfP~~n~lFEI~~VE~e~P 160 (278) |||++||+|||||+||+||+|+++||||||||++|||||+|||+||+++++++||+|||||||||+|+||||+||||++| T Consensus 78 skF~ka~~ieaYl~s~egy~G~~d~~SKFG~~v~DEvt~~Is~~rF~~~v~~~rP~EGDLIYfPm~n~LFEI~~VE~~~P 157 (254) T protein:vir:68 78 NKFTKAWKFAAYLNSFEGYEGAKSFFSNFGMQVQDEVTLSINPGLFKHQVNNQEPKEGDLIYFPMDNSLFEINWVEPYDP 157 (254) T ss_pred cccccceeEEEeeehhhccCCcccchhhcCceecceEEEEEcCchhhhhcCCCCCccccEEEEcCCCceEEEeccCCCCc Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred hhhcCCceEEEEEEEEeecCCceecccCcccccccchhhhhcccccccccccccccccCCceeccccccccccccccccc Q lcl|Aclame:pro 161 WYMNGVLPMRKMKMTKFVYSGEEINLEKPEAVIDSIDDILNFGEDTDEMIDIDKINALDGRWDIGIEQGAEITQIEDEVD 240 (278) Q Consensus 161 FYQ~Gk~yv~~l~ce~F~Ys~E~idTg~pe~~id~i~~i~~~~e~~~~~id~~~i~~~~G~~d~~~~~~~e~~~~~~e~~ 240 (278) |||+||+|||+|+|+||+||+|+|+||+++ ||+| ++.++++ ||++||++|+|++|+++++++|++++++|++ T Consensus 158 FYQ~GKn~~~~l~ce~F~Ys~E~idt~i~~--id~I-~~~e~~~-----ldl~~i~~ldG~~di~~~~~~E~~~~~~e~~ 229 (254) T protein:vir:68 158 FYQVGKNAIRKITAGKFIYSGEEINPVLQK--NEGI-NIPEFSD-----LELNPVRNLDGIHDINIDEYSEVEQINSEAS 229 (254) T ss_pred hhhhCCceEEEEEEEEEeeCCccccCCCcc--cCCc-cCcccCC-----cchhhHhhhcchhhccccchhhHHHHHhhhh Confidence 999999999999999999999999999755 7777 6676666 9999999999999999999999999999999 Q ss_pred eeeecccceeccCCccceecccCCccc Q lcl|Aclame:pro 241 KFYESEQVVPSGSDVQPTDPRNATIGF 267 (278) Q Consensus 241 ~~~~~~~~~~~~~~~~~t~~~~~~~~~ 267 (278) +|++|+++++++|+ +++|+.+.+-+ T Consensus 230 ~f~e~~~~vn~~g~--~~~pf~~~~~~ 254 (254) T protein:vir:68 230 EYVEPYVVVNNRGR--QNSPFDDGFMN 254 (254) T ss_pred hhcccceeecCCCC--CCCcccccccC Confidence 99999999999986 46666666643 No 5 >protein:vir:107937 Length: 257 # NCBI annotation: gp14 neck protein # Family: family:all:1104 # MgeID: mge:2002 # MgeName: JS98 # Cross-refs: genbank:acc:YP_001595290;genbank:gi:161622596;genbank:GeneID:5783656 Probab=100.00 E-value=1.6e-127 Score=715.72 Aligned_cols=257 Identities=40% Similarity=0.728 Sum_probs=251.3 Q ss_pred CcceecCCceEEEEecCCcchhhhhhcccccceeecCCcchhHHHHHHHHHHHHHhcCeeEEEeeeeecccccccccccc Q lcl|Aclame:pro 1 MGAYDTNTGGMFAKLESQKGYDQIYNNHLVNPYFNWVNHTNEQNLTDMLVAESIINRGVECVYLRREMEKVDLVFGEDPM 80 (278) Q Consensus 1 ~~~~~~~~~~~fa~le~~~gy~~~~~~~~~npyfN~~g~~~eQ~L~~~LV~E~Iqm~G~dvyYlPRe~v~~D~v~~E~~~ 80 (278) |+||||| ||||||+++||++|++++|||||||++||.+||+|+|+||+|||||||+|||||||++|++|+||+|+++ T Consensus 1 m~~~d~~---lfa~le~~~gy~~t~~~~~lnPYfn~~~~~~eQ~L~e~LV~EsIqm~GvdvyYlPRe~v~~D~i~~Ed~~ 77 (257) T protein:vir:10 1 MATFDSS---LFAKLENNTGYANTNETEIMNPFVNFYRHENTQTLADALVAESIQMRGIELYYIPREYVNPDQLFGEDLQ 77 (257) T ss_pred Ccccccc---eeeeecCCcchhhhhhhccccceeecccCCchhHHHHHHHHHHHHHcCceEEEcchhhhccccccccccc Confidence 9999999 9999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred ccccceeeeeeeehhhhccCCCcceeeecCceeeeeEEEEEcchhhhhccCCCCCccccEEEecCCCceEEEEeeccCCc Q lcl|Aclame:pro 81 SKFTQNFRMSLYVESFEGWDGDGDWYSKFGFQVNDEMNVCINPKLFAQQGDGKQPLMGDLIYFPLANSLFEISWIEREDP 160 (278) Q Consensus 81 skF~~a~~ieaYl~n~eGf~g~gd~~SKFG~~~~DE~Tf~IS~~rF~~~v~~~rP~EGDLIYfP~~n~lFEI~~VE~e~P 160 (278) |||++||+|||||+||+||+|+++||||||||++|||||+|||+||+++++++||+|||||||||+|+||||+||||++| T Consensus 78 skF~ka~~ieaYl~s~egy~G~~d~~SKFG~~v~DEvt~~Is~~rF~~~v~~~rP~EGDLIYfPm~n~LFEI~~VE~~~P 157 (257) T protein:vir:10 78 NKFTKAWKFAGYLDSFEGYSGDNTYFSKFGMMVNDEVTITINPNLFKHQCNGTEPVSGDLIYFPMDNSLFEINWVQPYDP 157 (257) T ss_pred cccccceeEEEeeehhhccCCCcceeeecCceecceEEEEEccchhhhhccCCCCccccEEEEcCCCceEEEecccCCCc Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred hhhcCCceEEEEEEEEeecCCceecccCcccccccchhhhhcccccccccccccccccCCceeccccccccccccccccc Q lcl|Aclame:pro 161 WYMNGVLPMRKMKMTKFVYSGEEINLEKPEAVIDSIDDILNFGEDTDEMIDIDKINALDGRWDIGIEQGAEITQIEDEVD 240 (278) Q Consensus 161 FYQ~Gk~yv~~l~ce~F~Ys~E~idTg~pe~~id~i~~i~~~~e~~~~~id~~~i~~~~G~~d~~~~~~~e~~~~~~e~~ 240 (278) |||+||+|||+|+|+||+||+|+| .|+++++..+.|.++.| ||++++++++|++|+|+++++|.+++++|++ T Consensus 158 FYQ~Gkn~~~~l~ce~F~Ys~E~l---~pel~~n~~~~V~e~~e-----ldl~~~~~ldG~~di~~~~~~E~~~~~~e~~ 229 (257) T protein:vir:10 158 FYQVGTNVQRRITATKFIYNGEEL---RPELQRNEGINIPEFSE-----LDLMPVKNIDGLADISDIQYEEVNEINAEAA 229 (257) T ss_pred hhhhCCceEEEEEEEEeeeCCccc---ccccCCcccCCCCCccc-----hhhhhhhhccchhhcCCchhhhHHHHHHhhh Confidence 999999999999999999999999 48899999999988888 9999999999999999999999999999999 Q ss_pred eeeecccceeccCCccceecccCCcccC Q lcl|Aclame:pro 241 KFYESEQVVPSGSDVQPTDPRNATIGFN 268 (278) Q Consensus 241 ~~~~~~~~~~~~~~~~~t~~~~~~~~~~ 268 (278) +|++|+.+++++|+..+++|+++.+-+. T Consensus 230 ~fi~p~~~~n~~g~~~~~~pf~~~~~~~ 257 (257) T protein:vir:10 230 EFVHPYVVINGRGEDAPPTAFDDAFLDD 257 (257) T ss_pred hhhccccccCCCCCCCCCCcccchhccC Confidence 9999999999999999999998887533 No 6 >protein:vir:106285 Length: 262 # NCBI annotation: gp14 neck protein # Family: family:all:1104 # MgeID: mge:1474 # MgeName: Aeh1 # Cross-refs: genbank:acc:NP_944101;genbank:gi:38640145;genbank:GeneID:2658033 Probab=100.00 E-value=6.9e-126 Score=706.78 Aligned_cols=259 Identities=40% Similarity=0.663 Sum_probs=241.6 Q ss_pred CcceecCCceEEEEecCCcchhhhhhcccccceeecCCcchhHHHHHHHHHHHHHhcCeeEEEeeeeecccccccccccc Q lcl|Aclame:pro 1 MGAYDTNTGGMFAKLESQKGYDQIYNNHLVNPYFNWVNHTNEQNLTDMLVAESIINRGVECVYLRREMEKVDLVFGEDPM 80 (278) Q Consensus 1 ~~~~~~~~~~~fa~le~~~gy~~~~~~~~~npyfN~~g~~~eQ~L~~~LV~E~Iqm~G~dvyYlPRe~v~~D~v~~E~~~ 80 (278) |+|||++ ||||||+++||++|++++|+|||||+++|++||+|+|+||+|||||||+|||||||++|++|+||+|+++ T Consensus 1 m~~~d~~---lfa~le~~~gy~~~~~~~vlNPYfN~~~~~~eQ~L~e~LV~EsIqm~GvdvyYlpRe~v~~D~i~gEd~~ 77 (262) T protein:vir:10 1 MFARNQS---MFAQLETGAGYNKTYQTNVLNPYVNKHEYEPTLSLHEMLVAESIQMTGVEMYYIRREFVNFDRIFGEDMQ 77 (262) T ss_pred Ccccccc---eeeEecCCCcccCcchhccccceeccCCcCchhhHHHHHHHHHHHHcCceEEEcchhhhccccccccccc Confidence 9999998 9999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred ccccceeeeeeeehhhhccCCCcceeeecCceeeeeEEEEEcchhhhhccCCCCCccccEEEecCCCceEEEEeeccCCc Q lcl|Aclame:pro 81 SKFTQNFRMSLYVESFEGWDGDGDWYSKFGFQVNDEMNVCINPKLFAQQGDGKQPLMGDLIYFPLANSLFEISWIEREDP 160 (278) Q Consensus 81 skF~~a~~ieaYl~n~eGf~g~gd~~SKFG~~~~DE~Tf~IS~~rF~~~v~~~rP~EGDLIYfP~~n~lFEI~~VE~e~P 160 (278) |||++||+|||||+||+||+|+|+||||||||++|||||+|||+||+++++++||+|||||||||+|+||||+||||++| T Consensus 78 SkF~ka~~ieaYl~s~egy~G~~d~~SKFG~~v~DEvt~~Is~~rF~~~~~~~rP~EGDLIYfPl~nsLFEI~~VE~~~P 157 (262) T protein:vir:10 78 SKFKKTYKVAMYLESFDEYSGQRDFFSKFGMQVNDEITMSVSPKLFETQADGDRVKEGDLIYFPLNNSLFEVTWVEPSSP 157 (262) T ss_pred cccccceeEEEeeehhhccCCccceeeecCceecceEEEEEccchhhhhhcCCCCccccEEEEcCCCceEEEeeccCCCc Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred hhhcCCceEEEEEEEEeecCCceecccCcccccccchhhhhcccccccccccccccccCCceeccccccccccccccccc Q lcl|Aclame:pro 161 WYMNGVLPMRKMKMTKFVYSGEEINLEKPEAVIDSIDDILNFGEDTDEMIDIDKINALDGRWDIGIEQGAEITQIEDEVD 240 (278) Q Consensus 161 FYQ~Gk~yv~~l~ce~F~Ys~E~idTg~pe~~id~i~~i~~~~e~~~~~id~~~i~~~~G~~d~~~~~~~e~~~~~~e~~ 240 (278) |||+||+|||+|+|+||+||+|+|+|| +++|+.|+. + ..+++++.++||++|+++.+++|++++++|++ T Consensus 158 FYQ~Gkn~~~~l~ce~F~Ys~E~i~~~-----i~~id~i~~--e----~~~l~~i~~lDg~~di~~~q~~e~~~~~~e~~ 226 (262) T protein:vir:10 158 VVKREQLAKYKVTAQKFIYSGEEIKPE-----FDPNRYVLG--E----DDPLSQIKALDGRADISLDEFAEDDAFNEEAE 226 (262) T ss_pred hhhhCCceEEEEEEEEEeeCCcccccc-----Ccccccccc--c----cccccccccccceeecccccccchhHHhhhhh Confidence 999999999999999999999999987 455555542 1 23689999999999999999999999999999 Q ss_pred eeeecccceeccCCccceecccCCcccCccccccccCC Q lcl|Aclame:pro 241 KFYESEQVVPSGSDVQPTDPRNATIGFNVNNSNPFDSF 278 (278) Q Consensus 241 ~~~~~~~~~~~~~~~~~t~~~~~~~~~~v~~~~~fd~~ 278 (278) +|+.++++++++|+|-. .+ .|++.++ |+||||+ T Consensus 227 ~fv~~~d~v~~~gsp~~--~~-~~~~~~~--~~~fdd~ 259 (262) T protein:vir:10 227 DFVVEFDNIIGNGTPIA--EH-KPTKPAP--VSAFDDL 259 (262) T ss_pred hhcchhcccCCCCCccc--cc-CCCCCCC--CChhhhh Confidence 99999999999987532 22 3333332 5999999 No 7 >protein:vir:101154 Length: 252 # NCBI annotation: neck protein # Family: family:all:1104 # MgeID: mge:1582 # MgeName: 44RR2.8t # Cross-refs: genbank:acc:NP_932505;genbank:gi:37651631;genbank:GeneID:2610647 Probab=100.00 E-value=7e-126 Score=706.73 Aligned_cols=252 Identities=39% Similarity=0.687 Sum_probs=242.8 Q ss_pred ceecCCceEEEEecCCcchhhhhhcccccceeecCCcchhHHHHHHHHHHHHHhcCeeEEEeeeeecccccccccccccc Q lcl|Aclame:pro 3 AYDTNTGGMFAKLESQKGYDQIYNNHLVNPYFNWVNHTNEQNLTDMLVAESIINRGVECVYLRREMEKVDLVFGEDPMSK 82 (278) Q Consensus 3 ~~~~~~~~~fa~le~~~gy~~~~~~~~~npyfN~~g~~~eQ~L~~~LV~E~Iqm~G~dvyYlPRe~v~~D~v~~E~~~sk 82 (278) -||++ ||||||+++||++|++++|+|||||++||++||+|+|+||+|||||||+|||||||++|++|+||+|+++|| T Consensus 1 m~d~~---lfa~le~~~gy~~t~~~~~lNPYfn~~~~~~eQ~L~e~LV~EsIqm~GvdvyYlpRe~v~~D~i~~Ed~~Sk 77 (252) T protein:vir:10 1 MMDKS---LFATLENRGGYMRTNEKNILNPYVKFNKHEGTQALQDTLVAESIQMRGIEFYYLEREFTDLDLLFGEDVNSR 77 (252) T ss_pred CCCcc---ceeEecCCcchhhhhhhccccceeeecCccchhHHHHHHHHHHHHHcCceEEEechhhcccccccccccccc Confidence 68999 999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred ccceeeeeeeehhhhccCCCcceeeecCceeeeeEEEEEcchhhhhccCCCCCccccEEEecCCCceEEEEeeccCCchh Q lcl|Aclame:pro 83 FTQNFRMSLYVESFEGWDGDGDWYSKFGFQVNDEMNVCINPKLFAQQGDGKQPLMGDLIYFPLANSLFEISWIEREDPWY 162 (278) Q Consensus 83 F~~a~~ieaYl~n~eGf~g~gd~~SKFG~~~~DE~Tf~IS~~rF~~~v~~~rP~EGDLIYfP~~n~lFEI~~VE~e~PFY 162 (278) |++||+|||||+||+||+|+|+||||||||++|||||+|||+||+++++++||+|||||||||+|+||||+||||++||| T Consensus 78 F~ka~~ieaYl~s~egy~G~gd~~SKFG~~~~DEvt~~Is~~rF~~qv~~~rP~EGDLIYfPm~n~LFEI~~VE~~~PFY 157 (252) T protein:vir:10 78 FEKAWKFAAWLNSFESYEGQQSFFSKFGHTQNDEIRISINPGLFKYQVNGKEPALGDLIYMPMDNSLFEITWVEPYSPFY 157 (252) T ss_pred cccceeEEEeeehhhccCCccceeeecCceecceEEEEEcCchhhhhccCCCCccccEEEEcCCCcEEEEeccCCCCchh Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred hcCCceEEEEEEEEeecCCceecccCcccccccchhhhhcccccccccccccccccCCceecccccccccccccccccee Q lcl|Aclame:pro 163 MNGVLPMRKMKMTKFVYSGEEINLEKPEAVIDSIDDILNFGEDTDEMIDIDKINALDGRWDIGIEQGAEITQIEDEVDKF 242 (278) Q Consensus 163 Q~Gk~yv~~l~ce~F~Ys~E~idTg~pe~~id~i~~i~~~~e~~~~~id~~~i~~~~G~~d~~~~~~~e~~~~~~e~~~~ 242 (278) |+||||||+|+|+||+||+|+|+||+++ ||+|+..+ + .||+++|++++|++|+++.+++|++++++|+++| T Consensus 158 Q~Gkn~~~~l~ce~F~Ys~E~idt~~~~--id~Ie~~~--s-----~ldl~~i~~ldG~~Di~~~~~~e~~~~~~e~~~~ 228 (252) T protein:vir:10 158 QNGKNPIRVIVAQKFIYSGEKITPVVQE--KPEIEDMY--N-----GLDLAPLLNLDGMIDQKIDQFAENIAVQQKVKQY 228 (252) T ss_pred hhCCCeEEEEEEEEEeeCCceecCcccc--cCccchhh--h-----ccchHHHhhcCCeeccccccchhhHHHHHhhhhh Confidence 9999999999999999999999999866 88877443 3 3899999999999999999999999999999999 Q ss_pred eecccceeccCCccceecccCCcc Q lcl|Aclame:pro 243 YESEQVVPSGSDVQPTDPRNATIG 266 (278) Q Consensus 243 ~~~~~~~~~~~~~~~t~~~~~~~~ 266 (278) ++|+++++++|..++++|+..--+ T Consensus 229 ~e~~~~i~~~~~~~~~~pf~~~~~ 252 (252) T protein:vir:10 229 AEPFDPISTNSFGNFDSPFGKHEA 252 (252) T ss_pred hccceeecCCCCCCcCCcccccCC Confidence 999999999999998888866554 No 8 >protein:vir:101800 Length: 252 # NCBI annotation: gp14 neck protein # Family: family:all:1104 # MgeID: mge:1580 # MgeName: 31 # Cross-refs: genbank:acc:YP_238877;genbank:gi:66391952;genbank:GeneID:3416627 Probab=100.00 E-value=7e-126 Score=706.73 Aligned_cols=252 Identities=39% Similarity=0.687 Sum_probs=242.8 Q ss_pred ceecCCceEEEEecCCcchhhhhhcccccceeecCCcchhHHHHHHHHHHHHHhcCeeEEEeeeeecccccccccccccc Q lcl|Aclame:pro 3 AYDTNTGGMFAKLESQKGYDQIYNNHLVNPYFNWVNHTNEQNLTDMLVAESIINRGVECVYLRREMEKVDLVFGEDPMSK 82 (278) Q Consensus 3 ~~~~~~~~~fa~le~~~gy~~~~~~~~~npyfN~~g~~~eQ~L~~~LV~E~Iqm~G~dvyYlPRe~v~~D~v~~E~~~sk 82 (278) -||++ ||||||+++||++|++++|+|||||++||++||+|+|+||+|||||||+|||||||++|++|+||+|+++|| T Consensus 1 m~d~~---lfa~le~~~gy~~t~~~~~lNPYfn~~~~~~eQ~L~e~LV~EsIqm~GvdvyYlpRe~v~~D~i~~Ed~~Sk 77 (252) T protein:vir:10 1 MMDKS---LFATLENRGGYMRTNEKNILNPYVKFNKHEGTQALQDTLVAESIQMRGIEFYYLEREFTDLDLLFGEDVNSR 77 (252) T ss_pred CCCcc---ceeEecCCcchhhhhhhccccceeeecCccchhHHHHHHHHHHHHHcCceEEEechhhcccccccccccccc Confidence 68999 999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred ccceeeeeeeehhhhccCCCcceeeecCceeeeeEEEEEcchhhhhccCCCCCccccEEEecCCCceEEEEeeccCCchh Q lcl|Aclame:pro 83 FTQNFRMSLYVESFEGWDGDGDWYSKFGFQVNDEMNVCINPKLFAQQGDGKQPLMGDLIYFPLANSLFEISWIEREDPWY 162 (278) Q Consensus 83 F~~a~~ieaYl~n~eGf~g~gd~~SKFG~~~~DE~Tf~IS~~rF~~~v~~~rP~EGDLIYfP~~n~lFEI~~VE~e~PFY 162 (278) |++||+|||||+||+||+|+|+||||||||++|||||+|||+||+++++++||+|||||||||+|+||||+||||++||| T Consensus 78 F~ka~~ieaYl~s~egy~G~gd~~SKFG~~~~DEvt~~Is~~rF~~qv~~~rP~EGDLIYfPm~n~LFEI~~VE~~~PFY 157 (252) T protein:vir:10 78 FEKAWKFAAWLNSFESYEGQQSFFSKFGHTQNDEIRISINPGLFKYQVNGKEPALGDLIYMPMDNSLFEITWVEPYSPFY 157 (252) T ss_pred cccceeEEEeeehhhccCCccceeeecCceecceEEEEEcCchhhhhccCCCCccccEEEEcCCCcEEEEeccCCCCchh Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred hcCCceEEEEEEEEeecCCceecccCcccccccchhhhhcccccccccccccccccCCceecccccccccccccccccee Q lcl|Aclame:pro 163 MNGVLPMRKMKMTKFVYSGEEINLEKPEAVIDSIDDILNFGEDTDEMIDIDKINALDGRWDIGIEQGAEITQIEDEVDKF 242 (278) Q Consensus 163 Q~Gk~yv~~l~ce~F~Ys~E~idTg~pe~~id~i~~i~~~~e~~~~~id~~~i~~~~G~~d~~~~~~~e~~~~~~e~~~~ 242 (278) |+||||||+|+|+||+||+|+|+||+++ ||+|+..+ + .||+++|++++|++|+++.+++|++++++|+++| T Consensus 158 Q~Gkn~~~~l~ce~F~Ys~E~idt~~~~--id~Ie~~~--s-----~ldl~~i~~ldG~~Di~~~~~~e~~~~~~e~~~~ 228 (252) T protein:vir:10 158 QNGKNPIRVIVAQKFIYSGEKITPVVQE--KPEIEDMY--N-----GLDLAPLLNLDGMIDQKIDQFAENIAVQQKVKQY 228 (252) T ss_pred hhCCCeEEEEEEEEEeeCCceecCcccc--cCccchhh--h-----ccchHHHhhcCCeeccccccchhhHHHHHhhhhh Confidence 9999999999999999999999999866 88877443 3 3899999999999999999999999999999999 Q ss_pred eecccceeccCCccceecccCCcc Q lcl|Aclame:pro 243 YESEQVVPSGSDVQPTDPRNATIG 266 (278) Q Consensus 243 ~~~~~~~~~~~~~~~t~~~~~~~~ 266 (278) ++|+++++++|..++++|+..--+ T Consensus 229 ~e~~~~i~~~~~~~~~~pf~~~~~ 252 (252) T protein:vir:10 229 AEPFDPISTNSFGNFDSPFGKHEA 252 (252) T ss_pred hccceeecCCCCCCcCCcccccCC Confidence 999999999999998888866554 No 9 >protein:vir:98258 Length: 248 # NCBI annotation: gp14 head completion # Family: family:all:1104 # MgeID: mge:1667 # MgeName: RB43 # Cross-refs: genbank:acc:YP_239191;genbank:gi:66391666;genbank:GeneID:3416360 Probab=100.00 E-value=1.1e-125 Score=705.74 Aligned_cols=248 Identities=42% Similarity=0.751 Sum_probs=238.2 Q ss_pred CcceecCCceEEEEecCCcchhhhhhcccccceeecCCcchhHHHHHHHHHHHHHhcCeeEEEeeeeecccccccccccc Q lcl|Aclame:pro 1 MGAYDTNTGGMFAKLESQKGYDQIYNNHLVNPYFNWVNHTNEQNLTDMLVAESIINRGVECVYLRREMEKVDLVFGEDPM 80 (278) Q Consensus 1 ~~~~~~~~~~~fa~le~~~gy~~~~~~~~~npyfN~~g~~~eQ~L~~~LV~E~Iqm~G~dvyYlPRe~v~~D~v~~E~~~ 80 (278) |+||||+ ||||||+++||++|+++++||||||+|+|++||+|+|+||+|||||||+|||||||++|++|+||+|+++ T Consensus 1 m~~~d~~---lfa~l~~~~gy~~t~~~~~lnPYfN~~~~~~eQ~L~e~LV~EsIqm~GvdvyYlPRe~v~~D~i~~Ed~~ 77 (248) T protein:vir:98 1 MQNWDES---LFAQLSTGEGVDRNLKDQVTNPYVNWYKYNPTQQLHDSLTAESIQMKSPDMYYVRREFVNIDKILGEDRE 77 (248) T ss_pred Ccccccc---eeeEecCCcchhhhhhcccccceeeccccCchhHHHHHHHHHHHHHcCceEEEcchhhhccccccccccc Confidence 9999998 9999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred ccccceeeeeeeehhhhccCCCcceeeecCceeeeeEEEEEcchhhhhccCCCCCccccEEEecCCCceEEEEeeccCCc Q lcl|Aclame:pro 81 SKFTQNFRMSLYVESFEGWDGDGDWYSKFGFQVNDEMNVCINPKLFAQQGDGKQPLMGDLIYFPLANSLFEISWIEREDP 160 (278) Q Consensus 81 skF~~a~~ieaYl~n~eGf~g~gd~~SKFG~~~~DE~Tf~IS~~rF~~~v~~~rP~EGDLIYfP~~n~lFEI~~VE~e~P 160 (278) |||++||+|||||+||+||+|+|+||||||||++|||||+|||+||+++++++||+|||||||||+|+||||+|||| +| T Consensus 78 skF~ka~~ieaYl~~~egy~G~~d~~SKFG~~~~DEvt~~Is~~rF~~~~~~~rP~EGDLIYfPm~n~LFEI~~VE~-dP 156 (248) T protein:vir:98 78 SKFTKSWKIAAYIESYANYEGQRDFFSKFGLSSNDEMTLVLNPRLFAHQTDGGIPVLGDLVYFPMDNSLFEITWVEA-DP 156 (248) T ss_pred cccccceeEEEeeehhhccCCccceeeecCceecceEEEEEccchhhhcCCCCCCccccEEEEcCCCceEEEEecCC-Cc Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999 69 Q ss_pred hhhcCCceEEEEEEEEeecCCceecccCcccccccchhhhhcccccccccccccccccCCceeccccccccccccccccc Q lcl|Aclame:pro 161 WYMNGVLPMRKMKMTKFVYSGEEINLEKPEAVIDSIDDILNFGEDTDEMIDIDKINALDGRWDIGIEQGAEITQIEDEVD 240 (278) Q Consensus 161 FYQ~Gk~yv~~l~ce~F~Ys~E~idTg~pe~~id~i~~i~~~~e~~~~~id~~~i~~~~G~~d~~~~~~~e~~~~~~e~~ 240 (278) |||+||+|||+|+|+||+||+|+|+||+.+ +|+|. +..+ ..+|+++|.+++|++|+|+++++|++++++||+ T Consensus 157 FYQ~Gkn~~~~l~ce~F~Ys~E~~~~~l~~--~d~i~-~~~~-----~~iDl~~i~~ldg~~Di~~~~~~e~~~~~~E~~ 228 (248) T protein:vir:98 157 FYQFGDRPQRKINLAKFIYTGEELAPELQR--NEGIH-IEPD-----AELDLEPIRNLDGLADINIEQYEEDKEFEREGD 228 (248) T ss_pred hhhhCCCeEEEEEEEEeeeCCccccccCCC--ccccC-CCCC-----cchhHHHhhcCccccccCcccccchhhhhhhhh Confidence 999999999999999999999999988644 55443 3333 449999999999999999999999999999999 Q ss_pred eeeecccceeccCCccceec Q lcl|Aclame:pro 241 KFYESEQVVPSGSDVQPTDP 260 (278) Q Consensus 241 ~~~~~~~~~~~~~~~~~t~~ 260 (278) +|+++++++|++|+|.++.| T Consensus 229 ~~~~~~~vin~~g~~~~~~~ 248 (248) T protein:vir:98 229 EFIESFDVVNGRGSPFATLP 248 (248) T ss_pred hhhcccceecCcCCCccCCC Confidence 99999999999999988888 No 10 >protein:vir:80995 Length: 246 # NCBI annotation: gp14 neck protein # Family: family:all:1104 # MgeID: mge:1888 # MgeName: Phi1 # Cross-refs: genbank:acc:YP_001469495;genbank:gi:157311452;genbank:GeneID:5602161 Probab=100.00 E-value=3.1e-124 Score=697.68 Aligned_cols=246 Identities=42% Similarity=0.774 Sum_probs=235.3 Q ss_pred ceecCCceEEEEecCCcchhhhhhcccccceeecCCcchhHHHHHHHHHHHHHhcCeeEEEeeeeecccccccccccccc Q lcl|Aclame:pro 3 AYDTNTGGMFAKLESQKGYDQIYNNHLVNPYFNWVNHTNEQNLTDMLVAESIINRGVECVYLRREMEKVDLVFGEDPMSK 82 (278) Q Consensus 3 ~~~~~~~~~fa~le~~~gy~~~~~~~~~npyfN~~g~~~eQ~L~~~LV~E~Iqm~G~dvyYlPRe~v~~D~v~~E~~~sk 82 (278) .|||| ||||||+++||++|++++|+|||||++||++||+|+|+||+|||||||+|||||||++|++|+||+|+++|| T Consensus 1 ~~~~~---lfa~l~~~~gy~~~~~~~~lNPYfn~~~~~~eQ~L~e~LV~EsIqm~GvdvyYlPRe~v~~D~i~~Ed~~sk 77 (246) T protein:vir:80 1 MFDST---LFARLESQKDYENTRQTEILNPYVNFNSHTNTQTLADIMVAESIQMRGVEMYYIPREFVKPDMIFGEDVQSK 77 (246) T ss_pred CCccc---ceeeecCCcchhhhcccccccceeeeCCCCchhhHHHHHHHHHHHHcCceEEEechhhhccccccccccccc Confidence 79999 999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred ccceeeeeeeehhhhccCCCcceeeecCceeeeeEEEEEcchhhhhccCCCCCccccEEEecCCCceEEEEeeccCCchh Q lcl|Aclame:pro 83 FTQNFRMSLYVESFEGWDGDGDWYSKFGFQVNDEMNVCINPKLFAQQGDGKQPLMGDLIYFPLANSLFEISWIEREDPWY 162 (278) Q Consensus 83 F~~a~~ieaYl~n~eGf~g~gd~~SKFG~~~~DE~Tf~IS~~rF~~~v~~~rP~EGDLIYfP~~n~lFEI~~VE~e~PFY 162 (278) |++||+|||||+||+||+|+|+||||||||++|||||+|||+||+++++++||+|||||||||+|+||||+||||++||| T Consensus 78 F~ka~~ieaYl~s~egy~G~gd~~SKFG~~v~DEvt~~Is~~rF~~~~~~~rP~EGDLIYfPm~n~LFEI~~VE~~~PFY 157 (246) T protein:vir:80 78 FTKAWKFAAYINSFDGYEGAGNFFQSFGYTANDELTITINPNLFKHQVDNKEPKSGDLFYIPMSNDLFEISYVEPYQPFF 157 (246) T ss_pred cccceeEEEeeehhhccCCccceeeecCceecceEEEEEccchHhhhhCCCCCccccEEEEcCCCceEEEecccCCCchh Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred hcCCceEEEEEEEEeecCCceecccCcccccccchhhhhcccccccccccccccccCCceecccccccccccccccccee Q lcl|Aclame:pro 163 MNGVLPMRKMKMTKFVYSGEEINLEKPEAVIDSIDDILNFGEDTDEMIDIDKINALDGRWDIGIEQGAEITQIEDEVDKF 242 (278) Q Consensus 163 Q~Gk~yv~~l~ce~F~Ys~E~idTg~pe~~id~i~~i~~~~e~~~~~id~~~i~~~~G~~d~~~~~~~e~~~~~~e~~~~ 242 (278) |+||||||+|+|+||+||+|+|+||+++ ++. +++.++++ ||+.+|++++|++|+++.+++|++++.+|+++| T Consensus 158 Q~GKn~v~~l~ce~F~Ys~E~~~t~i~~--~d~-I~~de~~~-----ldl~~i~nldg~~Din~~~~~e~~~~~~e~~~f 229 (246) T protein:vir:80 158 QAGKNAMRKIIAEKFVYSGEELRPELQR--NEG-INVDEFAD-----LDLAPITNLDGLTDINLDQYKEDKQFRSEGQDF 229 (246) T ss_pred hhCCCeEEEEEEEEEeecCcccccCCCC--ccc-cCCCCccc-----ccHHHHhhcccccccCcccchhhhhhhcchhhh Confidence 9999999999999999999999988644 443 33555555 899999999999999999999999999999999 Q ss_pred eecccceeccCCccceecccCCcccCccccccccCC Q lcl|Aclame:pro 243 YESEQVVPSGSDVQPTDPRNATIGFNVNNSNPFDSF 278 (278) Q Consensus 243 ~~~~~~~~~~~~~~~t~~~~~~~~~~v~~~~~fd~~ 278 (278) ++|+++++++| +|||+| T Consensus 230 ~~~~~~~~~~g-------------------spf~~~ 246 (246) T protein:vir:80 230 IDPFDPINGKG-------------------SPFADF 246 (246) T ss_pred cccceeecCCC-------------------CccccC Confidence 99999998886 678888 No 11 >protein:vir:6590 Length: 246 # NCBI annotation: neck protein # Family: family:all:1104 # MgeID: mge:139 # MgeName: RB49 # Cross-refs: genbank:acc:NP_891721;genbank:gi:33620667;genbank:GeneID:1725307 Probab=100.00 E-value=4.5e-124 Score=696.82 Aligned_cols=246 Identities=41% Similarity=0.756 Sum_probs=235.2 Q ss_pred ceecCCceEEEEecCCcchhhhhhcccccceeecCCcchhHHHHHHHHHHHHHhcCeeEEEeeeeecccccccccccccc Q lcl|Aclame:pro 3 AYDTNTGGMFAKLESQKGYDQIYNNHLVNPYFNWVNHTNEQNLTDMLVAESIINRGVECVYLRREMEKVDLVFGEDPMSK 82 (278) Q Consensus 3 ~~~~~~~~~fa~le~~~gy~~~~~~~~~npyfN~~g~~~eQ~L~~~LV~E~Iqm~G~dvyYlPRe~v~~D~v~~E~~~sk 82 (278) .||+| ||||||+++||++|++++|+|||||+|||.+||+|+|+||+|||||||+|||||||++|++|+||+|+++|| T Consensus 1 ~~~~~---lfa~l~~~~gy~~~~~~~~lNPYfN~~~~~~eQ~L~e~LV~EsIqm~GvdvyYlPRe~v~~D~i~~Ed~~sk 77 (246) T protein:vir:65 1 MFNNT---LFARLESQKDYENTRQTEILNPYVNFHKYTNTQTLADVMVAEAIQMRGVELYYIPREFVKPDMIFGEDVQSK 77 (246) T ss_pred CCccc---ceeeecCCcchhhhcccccccceeecCCCcchhhHHHHHHHHHHHHcCceEEEechhhcccccccccccccc Confidence 68999 999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred ccceeeeeeeehhhhccCCCcceeeecCceeeeeEEEEEcchhhhhccCCCCCccccEEEecCCCceEEEEeeccCCchh Q lcl|Aclame:pro 83 FTQNFRMSLYVESFEGWDGDGDWYSKFGFQVNDEMNVCINPKLFAQQGDGKQPLMGDLIYFPLANSLFEISWIEREDPWY 162 (278) Q Consensus 83 F~~a~~ieaYl~n~eGf~g~gd~~SKFG~~~~DE~Tf~IS~~rF~~~v~~~rP~EGDLIYfP~~n~lFEI~~VE~e~PFY 162 (278) |++||+|||||+||+||+|+|+||||||||++|||||+|||+||+++++++||+|||||||||+|+||||+||||++||| T Consensus 78 F~ka~~ieaYl~~~egy~G~~d~~SKFG~~v~DEvt~~Is~~rF~~~~~~~rP~EGDLIYfPm~n~LFEI~~VE~~~PFY 157 (246) T protein:vir:65 78 FTKAWKFAAYINSFDGYEGAGNFFSSFGYQANDELTFTVNPNLFKHQVDDQEPKSGDLIYIPMSNDLFEINYVEPYQPFF 157 (246) T ss_pred cccceeEEEeeehhhccCCccceeeecCceecceEEEEEcCchhhhhcCCCCCccccEEEEcCCCcEEEEecccCCCchh Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred hcCCceEEEEEEEEeecCCceecccCcccccccchhhhhcccccccccccccccccCCceecccccccccccccccccee Q lcl|Aclame:pro 163 MNGVLPMRKMKMTKFVYSGEEINLEKPEAVIDSIDDILNFGEDTDEMIDIDKINALDGRWDIGIEQGAEITQIEDEVDKF 242 (278) Q Consensus 163 Q~Gk~yv~~l~ce~F~Ys~E~idTg~pe~~id~i~~i~~~~e~~~~~id~~~i~~~~G~~d~~~~~~~e~~~~~~e~~~~ 242 (278) |+||||||+|+|+||+||+|+|+||+++ ++. +++.++.+ ||+.+|++++|++|+++.+++|++++.+|+++| T Consensus 158 Q~GKn~v~~l~ce~F~Ys~E~~~~~i~~--~d~-I~~de~~~-----ldl~~i~~ldg~~Din~~~~~e~~~~~~e~~~f 229 (246) T protein:vir:65 158 QAGKNAMRKIIAEKFVYSGEELRPELQR--NEG-INVDEFAD-----LDLAPITNLDGLTDINLDQYKEDKQFRSEGQDF 229 (246) T ss_pred hhCCCeEEEEEEEEEeecCcccccCCCC--ccc-cCCCCccc-----ccHHHHhhcccccccCccchhhhhhhhcchhhh Confidence 9999999999999999999999988644 443 33555555 899999999999999999999999999999999 Q ss_pred eecccceeccCCccceecccCCcccCccccccccCC Q lcl|Aclame:pro 243 YESEQVVPSGSDVQPTDPRNATIGFNVNNSNPFDSF 278 (278) Q Consensus 243 ~~~~~~~~~~~~~~~t~~~~~~~~~~v~~~~~fd~~ 278 (278) ++|+++++++| +|||+| T Consensus 230 ~~~~~~~~~~g-------------------spf~~~ 246 (246) T protein:vir:65 230 IDPFDPINGKG-------------------SPFADF 246 (246) T ss_pred cccceeecCCC-------------------CccccC Confidence 99999998886 678888 No 12 >protein:vir:100535 Length: 253 # NCBI annotation: gp14 head completion protein # Family: family:all:1104 # MgeID: mge:1488 # MgeName: 25 # Cross-refs: genbank:acc:YP_656376;genbank:gi:109290127;genbank:GeneID:4156513 Probab=100.00 E-value=1.2e-123 Score=694.46 Aligned_cols=253 Identities=39% Similarity=0.690 Sum_probs=236.0 Q ss_pred ceecCCceEEEEecCCcchhhhhhcccccceeecCCcchhHHHHHHHHHHHHHhcCeeEEEeeeeecccccccccccccc Q lcl|Aclame:pro 3 AYDTNTGGMFAKLESQKGYDQIYNNHLVNPYFNWVNHTNEQNLTDMLVAESIINRGVECVYLRREMEKVDLVFGEDPMSK 82 (278) Q Consensus 3 ~~~~~~~~~fa~le~~~gy~~~~~~~~~npyfN~~g~~~eQ~L~~~LV~E~Iqm~G~dvyYlPRe~v~~D~v~~E~~~sk 82 (278) -|||+ ||||||+++||++|++++|+|||||++||++||+|+|+||+|||||||+|||||||++|++|+||+|+++|| T Consensus 1 ~~~~~---lfa~l~~~~gy~~t~~~~~lNPYfn~~~~~~eQ~L~e~LV~EsIqm~GvdvyYlPRe~v~~D~i~~Ed~~sk 77 (253) T protein:vir:10 1 MMDKS---LFATLENRSGYQQTNEQNILNPYVKFNRYEGSQALHDTLVAESIQMRGLEFYYLEREYTNLDLLFGEDPNSR 77 (253) T ss_pred CcCcc---ceeEecCCcchhhhhhhccccceeeccccCchhHHHHHHHHHHHHHcCceEEEcchhhccccCccccccccc Confidence 79999 999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred ccceeeeeeeehhhhccCCCcceeeecCceeeeeEEEEEcchhhhhccCCCCCccccEEEecCCCceEEEEeeccCCchh Q lcl|Aclame:pro 83 FTQNFRMSLYVESFEGWDGDGDWYSKFGFQVNDEMNVCINPKLFAQQGDGKQPLMGDLIYFPLANSLFEISWIEREDPWY 162 (278) Q Consensus 83 F~~a~~ieaYl~n~eGf~g~gd~~SKFG~~~~DE~Tf~IS~~rF~~~v~~~rP~EGDLIYfP~~n~lFEI~~VE~e~PFY 162 (278) |++||+|||||+||+||+|+++||||||||++|||||+|||+||+++++++||+|||||||||+|+||||+||||++||| T Consensus 78 F~ka~~ieaYl~~~egy~G~gd~~SKFG~~v~DEvt~~Is~~rF~~~v~~~rP~EGDLIYfPm~n~LFEI~~VE~~~PFY 157 (253) T protein:vir:10 78 FEKAWKFAAWLNSFESYEGQQSFFSKFGHQQNDEVRISINPGLFKYQVNGKEPKLGDLIYMPMDNSLFEITWVEPYTPFY 157 (253) T ss_pred cccceeEEEeeehhhccCCccceeeecCceecceEEEEEcCchhhhhccCCCCccccEEEEcCCCcEEEEeccCCCCchh Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred hcCCceEEEEEEEEeecCCceecccCcccccccchhhhhcccccccccccccccccCCceecccccccccccccccccee Q lcl|Aclame:pro 163 MNGVLPMRKMKMTKFVYSGEEINLEKPEAVIDSIDDILNFGEDTDEMIDIDKINALDGRWDIGIEQGAEITQIEDEVDKF 242 (278) Q Consensus 163 Q~Gk~yv~~l~ce~F~Ys~E~idTg~pe~~id~i~~i~~~~e~~~~~id~~~i~~~~G~~d~~~~~~~e~~~~~~e~~~~ 242 (278) |+||+|||+|+|+||+||+|+|+||+.+ +|.|+. ++ ..||+++|.+++|++|+++.+++|++++++|+++| T Consensus 158 Q~Gkn~~~~l~ce~F~Ys~E~i~tgi~~--id~Ie~--~~-----~~ldl~~i~~l~G~~Di~~~~~~e~~~~~~e~~~~ 228 (253) T protein:vir:10 158 QMGKNPIRVIVAQKFIYSGEKLAPQFQE--KPEIED--QY-----NGLDLEPILNLDGFIDQKINEFGENVQAQNEARPF 228 (253) T ss_pred hhCCceEEEEEEEEEecCCccccccCcc--cccccc--hh-----hhhhhhhhhcCCCccccccccccccchhhhccccc Confidence 9999999999999999999999998633 555542 22 35999999999999999999999999999999999 Q ss_pred eecccceeccCCccceecccCCcccCccc Q lcl|Aclame:pro 243 YESEQVVPSGSDVQPTDPRNATIGFNVNN 271 (278) Q Consensus 243 ~~~~~~~~~~~~~~~t~~~~~~~~~~v~~ 271 (278) ++++.+++++++...+ .||++|-.- T Consensus 229 v~~~~~~~~~~~~g~~----spf~~~~~~ 253 (253) T protein:vir:10 229 VEPFDPISTNPVNSFN----SPFGRHEGQ 253 (253) T ss_pred cccceeccCCCCcccc----CcccccCCC Confidence 9999999888665544 444444432 No 13 >protein:vir:104476 Length: 308 # NCBI annotation: gp14 # Family: family:all:1104 # MgeID: mge:1548 # MgeName: P-SSM4 # Cross-refs: genbank:acc:YP_214650;genbank:gi:61806291;genbank:GeneID:3294531 Probab=100.00 E-value=1.1e-110 Score=623.36 Aligned_cols=257 Identities=29% Similarity=0.459 Sum_probs=214.7 Q ss_pred CcceecCCceEEEEecCCcchhhhhhcccccceeecCCcchhHHHHHHHHHHHHHhcCeeEEEeeeeecccccccccccc Q lcl|Aclame:pro 1 MGAYDTNTGGMFAKLESQKGYDQIYNNHLVNPYFNWVNHTNEQNLTDMLVAESIINRGVECVYLRREMEKVDLVFGEDPM 80 (278) Q Consensus 1 ~~~~~~~~~~~fa~le~~~gy~~~~~~~~~npyfN~~g~~~eQ~L~~~LV~E~Iqm~G~dvyYlPRe~v~~D~v~~E~~~ 80 (278) |+-=.|- ==.+.++++.+|||||+|||++||+|+|+||+|||||||+|||||||++|++|+||+|+++ T Consensus 1 ~~~~~~~------------~~py~~~~~~~~~~~n~~~~~~eQ~L~e~LV~EsIqm~G~dvyYlpRe~v~~D~i~~Ed~~ 68 (308) T protein:vir:10 1 MAIQNSP------------AQDYVQSDYSNAGRLKANASSQEQKFIENLVVESIEIYGQDIYYVPRTIVNRDSVFEEDSD 68 (308) T ss_pred CccccCC------------CCCcccccccccceEEEeccCchhHHHHHHHHHHHHhcCceEEEechhhcccccccccccc Confidence 3322221 1145678888999999999999999999999999999999999999999999999999999 Q ss_pred ccccceeeeeeeehhhhccCCCcceeeecCceeeeeEEEEEcchhhhhccCCC-------CCccccEEEecCCCceEEEE Q lcl|Aclame:pro 81 SKFTQNFRMSLYVESFEGWDGDGDWYSKFGFQVNDEMNVCINPKLFAQQGDGK-------QPLMGDLIYFPLANSLFEIS 153 (278) Q Consensus 81 skF~~a~~ieaYl~n~eGf~g~gd~~SKFG~~~~DE~Tf~IS~~rF~~~v~~~-------rP~EGDLIYfP~~n~lFEI~ 153 (278) |||++||+|||||+||+||+|+++||||||||++|||||+|||+||++++++. ||+|||||||||+|+||||| T Consensus 69 skF~~a~~ieaY~~~~egy~g~~~~~SKFG~~~~DE~t~~is~~rF~~~v~~~~~~~~~~rP~EGDLIYfPl~~~lFEI~ 148 (308) T protein:vir:10 69 GKFESAKAIRAYVNNVEGWEGQGELLSKFGIRIEDKTTFIFSREKFKEHVDDSVTLNVEGRPNEGDLIWFPITKHLFEIK 148 (308) T ss_pred cccccceeEEEEeechhccCCCcceeeecCceecceEEEEEccchhhhhcCCccccccCCCCccccEEEecCCCceEEEE Confidence 99999999999999999999999999999999999999999999999999984 99999999999999999999 Q ss_pred eeccCCchhhcCCceEEEEEEEEeecCCceecccCcccccccchhhhhcccccccccccccccccCCceecccccccccc Q lcl|Aclame:pro 154 WIEREDPWYMNGVLPMRKMKMTKFVYSGEEINLEKPEAVIDSIDDILNFGEDTDEMIDIDKINALDGRWDIGIEQGAEIT 233 (278) Q Consensus 154 ~VE~e~PFYQ~Gk~yv~~l~ce~F~Ys~E~idTg~pe~~id~i~~i~~~~e~~~~~id~~~i~~~~G~~d~~~~~~~e~~ 233 (278) ||||++||||+||||||+|+|+||+||+|+|+||+++ +|+|.. +....|||.++++++|++++++.++++++ T Consensus 149 ~VE~~~PFyQ~Gk~~~~~l~ce~F~Ys~E~~~~~i~~--iD~i~~------~~~~~LdL~pIs~l~G~fdInE~v~gest 220 (308) T protein:vir:10 149 FVEVERPFYQLGRNYVWECQCELFEYSDEEINTGITE--LDAIET------AFANAITVGLVAGGTGTFTVGETITGGTS 220 (308) T ss_pred cccCCCchhhhCCceEEEEEEEEEeeCCcccccCCcc--cccccc------ccccceeeeeeccCCccccccceeccccc Confidence 9999999999999999999999999999999999755 665553 22244999999999999999999999999 Q ss_pred cccccccee---eecc-------------cceeccCCccceecccCCcccCc--------------------cccccccC Q lcl|Aclame:pro 234 QIEDEVDKF---YESE-------------QVVPSGSDVQPTDPRNATIGFNV--------------------NNSNPFDS 277 (278) Q Consensus 234 ~~~~e~~~~---~~~~-------------~~~~~~~~~~~t~~~~~~~~~~v--------------------~~~~~fd~ 277 (278) ++++||+.+ +.+- .+++.+++..+|+...++. ++. +-.|||.. T Consensus 221 ~itAEv~~wds~v~~ItV~N~gGsftspptItGsts~a~~t~~s~~~~-~nt~~~~~~n~~fet~~D~iiDftE~NPFG~ 299 (308) T protein:vir:10 221 NVTAEVKSFDASTRTLIVINRSGTFTVPETVTGGTSSASWTTATYNTI-DNQNLDYDQNNDFETLDNQIIDFTEANPFGS 299 (308) T ss_pred ceEEEEEEecCCceEEEEEeCCCceeeCcEEEeccCCceeEEEeeeec-ccCCCcccCCcceeeccCcEEeeccCCCCcc Confidence 999999875 3333 3333333333333332221 111 01345555 Q ss_pred C Q lcl|Aclame:pro 278 F 278 (278) Q Consensus 278 ~ 278 (278) | T Consensus 300 ~ 300 (308) T protein:vir:10 300 V 300 (308) T ss_pred c Confidence 5 No 14 >protein:vir:106986 Length: 292 # NCBI annotation: neck protein gp14 # Family: family:all:1104 # MgeID: mge:1459 # MgeName: S-PM2 # Cross-refs: genbank:acc:YP_195128;genbank:gi:58532905;uniprot:Q5GQV9;genbank:GeneID:3260483 Probab=100.00 E-value=6e-106 Score=597.43 Aligned_cols=242 Identities=29% Similarity=0.479 Sum_probs=207.7 Q ss_pred ccccceee--cCCcchhHHHHHHHHHHHHHhcCeeEEEeeeeeccccccccccccccccceeeeeeeehhhhccCCCcce Q lcl|Aclame:pro 28 HLVNPYFN--WVNHTNEQNLTDMLVAESIINRGVECVYLRREMEKVDLVFGEDPMSKFTQNFRMSLYVESFEGWDGDGDW 105 (278) Q Consensus 28 ~~~npyfN--~~g~~~eQ~L~~~LV~E~Iqm~G~dvyYlPRe~v~~D~v~~E~~~skF~~a~~ieaYl~n~eGf~g~gd~ 105 (278) --+||||| +|||++||+|+|+||+|||||||+|||||||++|+ |++|+|+++|||++||+|||||+||+||+|+++| T Consensus 1 m~~npyfn~~~~~~~~eQ~L~~~LV~Esiq~~G~dvyYlpRe~~~-d~~~~E~~~skF~~a~~ieaY~~~~eg~~g~~~~ 79 (292) T protein:vir:10 1 MPTSPYFPSYYSGYSGEQNLVQDLVDEQIKLFGTDIYYLPRTILR-DNTLDDVIYNKFERQFQVEMLLQNVEGFGSPSEF 79 (292) T ss_pred CCcCccccccccCcCchhHHHHHHHHHHHHhcCceEEEechhhhc-ccccccccccccccceeEEEEeechhccCCCcce Confidence 56999999 68999999999999999999999999999999999 9999999999999999999999999999999999 Q ss_pred eeecCceeeeeEEEEEcchhhhhccCC------CCCccccEEEecCCCceEEEEeeccCCchhhcCCceEEEEEEEEeec Q lcl|Aclame:pro 106 YSKFGFQVNDEMNVCINPKLFAQQGDG------KQPLMGDLIYFPLANSLFEISWIEREDPWYMNGVLPMRKMKMTKFVY 179 (278) Q Consensus 106 ~SKFG~~~~DE~Tf~IS~~rF~~~v~~------~rP~EGDLIYfP~~n~lFEI~~VE~e~PFYQ~Gk~yv~~l~ce~F~Y 179 (278) |||||||++|||||+|||+||++++++ +||+|||||||||+|+|||||||||++||||+||+|||+|+|+||+| T Consensus 80 ~sKFG~~~~De~t~~is~~~f~~~~~~~~~~~~~~P~eGDLIYfPl~~~lFEI~~ve~~~PfyQ~gk~~~~~l~~~~F~Y 159 (292) T protein:vir:10 80 ISKFGLRITDEVRFIVSQRRWDEEAVNYDLNVNGRPNEGDLLYFPLTQDIYEIKFVEREDPFYQLGKNYFYIMTAEIYEY 159 (292) T ss_pred eeecCceecceEEEEEccchhhhhcCcccccccCCCccccEEEEcCCCcEEEEEcccCCCchhhhCCceEEEEEEEEEee Confidence 999999999999999999999999998 89999999999999999999999999999999999999999999999 Q ss_pred CCceecccCcccccccchhhhhcccccccccccccccccCCceeccccccccccccccccceeeecc---cceecc---- Q lcl|Aclame:pro 180 SGEEINLEKPEAVIDSIDDILNFGEDTDEMIDIDKINALDGRWDIGIEQGAEITQIEDEVDKFYESE---QVVPSG---- 252 (278) Q Consensus 180 s~E~idTg~pe~~id~i~~i~~~~e~~~~~id~~~i~~~~G~~d~~~~~~~e~~~~~~e~~~~~~~~---~~~~~~---- 252 (278) |+|+|++|+|+ +|+|+.. .++ .|++.++..++|.+++++.++++.+.+++||+++..+. .+.+.+ T Consensus 160 s~E~idtgl~e--iD~i~~~-~ss-----eLdL~pi~~g~G~f~inE~vtge~sg~~AEv~sw~~~t~~L~V~n~~GsF~ 231 (292) T protein:vir:10 160 GSDNISTGVEE--IDELETL-FSS-----AIAIALSIGGTGDFDLGEIVTGGISGTEAEVKSWDSSSRILQVINRTGTFE 231 (292) T ss_pred cCceecCCCCc--ccccccc-ccc-----ccceeecccCCccccCCceeeecccceEEEEEEccCCCceEEEEeCccccc Confidence 99999999877 7777653 233 38999999999999999999999999999998874322 233333 Q ss_pred ---------CCccceecccCC-------cccCc------------cccccccCC Q lcl|Aclame:pro 253 ---------SDVQPTDPRNAT-------IGFNV------------NNSNPFDSF 278 (278) Q Consensus 253 ---------~~~~~t~~~~~~-------~~~~v------------~~~~~fd~~ 278 (278) |+..+++..-+. .+-++ .-.|||..| T Consensus 232 T~e~i~G~~Sga~~~v~si~~~~g~~~t~a~~~~iEt~~d~i~df~e~npfg~~ 285 (292) T protein:vir:10 232 EGESVTGNDSGSVWVVDSFDTLNNTNSEYDQNREIESTADTIIDWSESNPFGEY 285 (292) T ss_pred cCceeeEeecCCeEEeeEEEEeCCCCCcccccceeccccCcEEeeccCCcCccc Confidence 333332222111 11111 123566666 No 15 >protein:vir:103005 Length: 390 # NCBI annotation: gp110 # Family: family:all:1104 # MgeID: mge:1583 # MgeName: Syn9 # Cross-refs: genbank:acc:YP_717777;genbank:gi:113200614;genbank:GeneID:4239009 Probab=100.00 E-value=3.3e-100 Score=565.98 Aligned_cols=258 Identities=27% Similarity=0.397 Sum_probs=209.9 Q ss_pred EEecCCcchhhhhhcccccceeecCCcchhHHHHHHHHHHHHHhcCeeEEEeeeeeccccccccccccccccceeeeeee Q lcl|Aclame:pro 13 AKLESQKGYDQIYNNHLVNPYFNWVNHTNEQNLTDMLVAESIINRGVECVYLRREMEKVDLVFGEDPMSKFTQNFRMSLY 92 (278) Q Consensus 13 a~le~~~gy~~~~~~~~~npyfN~~g~~~eQ~L~~~LV~E~Iqm~G~dvyYlPRe~v~~D~v~~E~~~skF~~a~~ieaY 92 (278) -...+..|||++|+++++|||||+|||.+||+|+|+||+|||||||+||||||||+|++|+||+||++|||++||+|||| T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~l~~~lv~e~i~~~g~~~~y~~r~~~~~d~~~~e~~~~~f~~~~~~~~y 80 (390) T protein:vir:10 1 MTYSNDPPNNCIQSDYTSSCRLNLNGSAQEQTFMENLIVESIELYGQNVYYLPRIYVNRDTILNEVETSRFEQALSVRAY 80 (390) T ss_pred CeecCCCcccceecceeeccEEEEeccCchhHHHHHHHHHHhHhcCceEEEechheeccccccccccccccccceEEEEE Confidence 34568899999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred ehhhhccCCCcceeeecCceeeeeEEEEEcchhhhhccCC-------CCCccccEEEecCCCceEEEEeeccCCchhhcC Q lcl|Aclame:pro 93 VESFEGWDGDGDWYSKFGFQVNDEMNVCINPKLFAQQGDG-------KQPLMGDLIYFPLANSLFEISWIEREDPWYMNG 165 (278) Q Consensus 93 l~n~eGf~g~gd~~SKFG~~~~DE~Tf~IS~~rF~~~v~~-------~rP~EGDLIYfP~~n~lFEI~~VE~e~PFYQ~G 165 (278) |+|||||+|++|||||||||++|||||+|||+||++++++ +||+|||||||||+++||||+||||++||||+| T Consensus 81 ~~~~~~~~~~~~~~skfg~~~~de~~~~~~~~~~~~~~~~~~~~~~~~~p~egdliy~p~~~~lfei~~ve~~~p~yq~G 160 (390) T protein:vir:10 81 VNNVEGWEGQGDLLSKFGVRIEDKTTFIFSRKKFTTAVDDNAVLNVEGRPNEGDLIWFPATRHLFEIKFVEAERPFYQLG 160 (390) T ss_pred eechhccCCccceeeecCceecceEEEEECCcchhhhhCCcccccccCCCCCCceEEecCCCCEEEEEecCCCCCceEcc Confidence 9999999999999999999999999999999999999997 499999999999999999999999999999999 Q ss_pred CceEEEEEEEEeecCCceecccCcccccccchhhhhcccccccccccccccccCCceecccccc-----cc--ccccccc Q lcl|Aclame:pro 166 VLPMRKMKMTKFVYSGEEINLEKPEAVIDSIDDILNFGEDTDEMIDIDKINALDGRWDIGIEQG-----AE--ITQIEDE 238 (278) Q Consensus 166 k~yv~~l~ce~F~Ys~E~idTg~pe~~id~i~~i~~~~e~~~~~id~~~i~~~~G~~d~~~~~~-----~e--~~~~~~e 238 (278) |+|+|+|+|++|+||+|+++++.++ ++.+.... ...+....+....+......... +. ++..... T Consensus 161 ~nyt~~i~a~lf~ySge~iat~~se--id~I~~~~------~~~v~~~~~t~g~~~~t~~~~v~~~g~ga~~~a~v~~g~ 232 (390) T protein:vir:10 161 KGYVWECQCELFEYSDEDLDTGVAE--IDAIETAF------ANAIKLVMDAGGTGAFTVGEEIVGDLYLATATATISGDA 232 (390) T ss_pred CceeeeeEEeeeccCCccccccccc--cccccccc------cceeeeeeccCCcccccccceeeecCcceeEEEEecCCe Confidence 9999999999999999999987544 44443221 12233333333333333222211 11 1222345 Q ss_pred cceeeecccceeccCCccceecccCCcccCcccccccc------CC Q lcl|Aclame:pro 239 VDKFYESEQVVPSGSDVQPTDPRNATIGFNVNNSNPFD------SF 278 (278) Q Consensus 239 ~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~v~~~~~fd------~~ 278 (278) +..+..++.+.+|+++++|++++..+.+.+....-..+ +. T Consensus 233 Vt~vtItn~GsGYt~~~~ptVtisgg~gtgAt~tatv~~~G~VtsI 278 (390) T protein:vir:10 233 VDAVTVTDGGEHYKSALPPTVTITGGGGSGATATATVSSAGIVTGI 278 (390) T ss_pred EEEEEEeeCCCCcccCceeEEEecCCCCccceeeeeecccceEEEE Confidence 77899999999999998888876544332211111111 11 No 16 >protein:vir:104739 Length: 470 # NCBI annotation: T4-like neck protein # Family: family:all:1104 # MgeID: mge:1630 # MgeName: P-SSM2 # Cross-refs: genbank:acc:YP_214353;genbank:gi:61805993;genbank:GeneID:3294259 Probab=100.00 E-value=7e-86 Score=487.42 Aligned_cols=235 Identities=26% Similarity=0.406 Sum_probs=175.1 Q ss_pred ccccceeecCCcchhHHHHHHHHHHHHHhcCeeEEEeeeeeccccccccccccccccceeeeeeeehhhhccCCCcceee Q lcl|Aclame:pro 28 HLVNPYFNWVNHTNEQNLTDMLVAESIINRGVECVYLRREMEKVDLVFGEDPMSKFTQNFRMSLYVESFEGWDGDGDWYS 107 (278) Q Consensus 28 ~~~npyfN~~g~~~eQ~L~~~LV~E~Iqm~G~dvyYlPRe~v~~D~v~~E~~~skF~~a~~ieaYl~n~eGf~g~gd~~S 107 (278) -.+||||| |||.+||+|+|+||+|||||||+||||||||+|++|+||+|+++|||++||+|||||+|||||+|+++|+| T Consensus 1 ~~~~~~~~-~~~~~~~~~~~~~~~e~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~ 79 (470) T protein:vir:10 1 MALNPFFL-QGTSSEQRLTQDLINEHLKIYGVEVTYIPRKYVNTKSIIEEVQSSKFDDNFAIEAYVNTYEGYGGQGDVLT 79 (470) T ss_pred CcccceeE-cCCCchhHHHHHHHHHHhHhccceEEEechhhcccccccccccccccccceeEEEEeecccCcCCcceeee Confidence 77999997 99999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred ecCceeeeeEEEEEcchhhh------------------hccCCCCCccccEEEecCCCceEEEEeeccCCchhhcCCceE Q lcl|Aclame:pro 108 KFGFQVNDEMNVCINPKLFA------------------QQGDGKQPLMGDLIYFPLANSLFEISWIEREDPWYMNGVLPM 169 (278) Q Consensus 108 KFG~~~~DE~Tf~IS~~rF~------------------~~v~~~rP~EGDLIYfP~~n~lFEI~~VE~e~PFYQ~Gk~yv 169 (278) |||+|++|||+|+|||+||+ +|+...||+|||||||||+|+||||+|||+++||||+||+|+ T Consensus 80 ~fg~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~p~egdl~~~p~~~~~~~i~~ve~~~p~~~~G~~~~ 159 (470) T protein:vir:10 80 KFGMSIRDEVTLTISKERFEDFIAPFMAGLDDGPGGNEEVILATRPREGDLVFFPLGSRLFEVKFVEHEDPFYQLGKNYV 159 (470) T ss_pred ecCcccceEEEEEECCccccccccchhhcccCcccccccccccCCcccccEEEecCCCCEEEEEecCCCCcchhcCccee Confidence 99999999999999999996 455568999999999999999999999999999999999999 Q ss_pred EEEEEEEeecCCceecccCcccccccchhhhhcccccccccccccccccCCceeccccccccccccccccceeeecccce Q lcl|Aclame:pro 170 RKMKMTKFVYSGEEINLEKPEAVIDSIDDILNFGEDTDEMIDIDKINALDGRWDIGIEQGAEITQIEDEVDKFYESEQVV 249 (278) Q Consensus 170 ~~l~ce~F~Ys~E~idTg~pe~~id~i~~i~~~~e~~~~~id~~~i~~~~G~~d~~~~~~~e~~~~~~e~~~~~~~~~~~ 249 (278) |+|+|++|+|++|.+++++.. +.... ................+.... .......+..+.....+. T Consensus 160 ~~it~~~f~ysge~~s~~v~~-----~~~~~---~~~g~~~t~t~~~~g~~~~~t-------~~~~~g~vt~ititn~Gs 224 (470) T protein:vir:10 160 YQLKCELFEYEDEVIDTSIDA-----IDTVV---QDDGYISKLQLVGIGRTAEVA-------ASIGVGYVREIFLNNDGS 224 (470) T ss_pred EEeeeceeEecCCccccceec-----ccccc---cccccceeeeecCCCccceee-------eeecceeeeEeEeecccc Confidence 999999999999999976422 22111 011111111000000001111 111223345566667776 Q ss_pred eccCCccceecccCCcccCc-----------------cccccccCC Q lcl|Aclame:pro 250 PSGSDVQPTDPRNATIGFNV-----------------NNSNPFDSF 278 (278) Q Consensus 250 ~~~~~~~~t~~~~~~~~~~v-----------------~~~~~fd~~ 278 (278) +++..|..+.+.....+... ...++=.-| T Consensus 225 gyt~~ptVti~~~~~~~~~~a~~~~~t~~~~g~vt~ititn~Gsgy 270 (470) T protein:vir:10 225 GFTSPPTITFSASPAFTDARAVGILTTRANVTSIEKILMTSAGAGY 270 (470) T ss_pred ceeccCEEEEccCCCCCCccceeeEeecceeeEEEEEEEecCcccc Confidence 66665444433221111000 000110111 No 17 >protein:vir:1385 Length: 107 # NCBI annotation: Gp8 protein # Family: family:all:3858 # MgeID: mge:314 # MgeName: phi3626 # Cross-refs: genbank:acc:NP_612837;genbank:gi:20065971;genbank:GeneID:935786 Probab=33.24 E-value=1.4 Score=19.83 Aligned_cols=106 Identities=8% Similarity=0.033 Sum_probs=76.3 Q ss_pred hcCe-eEEEeeeeeccccccccccccccccceeeeeeeehhhhccCCCcceeeecCceeeeeEEEEEcchhhhhccCCCC Q lcl|Aclame:pro 56 NRGV-ECVYLRREMEKVDLVFGEDPMSKFTQNFRMSLYVESFEGWDGDGDWYSKFGFQVNDEMNVCINPKLFAQQGDGKQ 134 (278) Q Consensus 56 m~G~-dvyYlPRe~v~~D~v~~E~~~skF~~a~~ieaYl~n~eGf~g~gd~~SKFG~~~~DE~Tf~IS~~rF~~~v~~~r 134 (278) |.+- -|....++-+ .|. .|... ..+...+++-|.+...-| .++++--+++..-.+.|+| ||..-++..+ T Consensus 1 ~~~~hRI~i~~~~~~-~D~-~G~~~-~~w~~~~~~WA~v~~~~g----~E~~~a~~~~~~~~~~f~i---Ry~~~i~~~~ 70 (107) T protein:vir:13 1 MARYERISIKKLEEK-NIK-GRRQE-ECLIPFYDCWAEILDLYG----QELYGALQMKLENTIIFKI---RYCKKVEELR 70 (107) T ss_pred CCcceEEEEEeeeee-eCC-CCCee-cceEeEEEEEEEEecCCc----hheeecceeheeeeEEEEE---EecCCccccc Confidence 7664 4666655554 574 45443 469999999999999754 5788888888888888888 4444555556 Q ss_pred CccccEEEecCCCceEEEEeeccCCchhhcCCceEEEEEEEEee Q lcl|Aclame:pro 135 PLMGDLIYFPLANSLFEISWIEREDPWYMNGVLPMRKMKMTKFV 178 (278) Q Consensus 135 P~EGDLIYfP~~n~lFEI~~VE~e~PFYQ~Gk~yv~~l~ce~F~ 178 (278) +..++-|.+ .++.|+|..|.+.+ .++-..+|.|+.=. T Consensus 71 ~t~~~Ri~~--~g~~y~I~~v~~~~-----~~~~~l~i~c~eV~ 107 (107) T protein:vir:13 71 NKENFIVEW--QGRKYEIYYPDFLG-----YNKQFVKLKCKEVL 107 (107) T ss_pred cCcCcEEEE--CCeEEEEEecCCcc-----cCCeEEEEEEEEeC Confidence 667777766 78999999997532 25557899998766 No 18 >protein:vir:97237 Length: 122 # NCBI annotation: hypothetical protein ORF025 # Family: family:all:704 # MgeID: mge:1657 # MgeName: M6 # Cross-refs: genbank:acc:YP_001294533;genbank:gi:149408254;genbank:GeneID:5237102 Probab=32.53 E-value=1.4 Score=19.75 Aligned_cols=121 Identities=12% Similarity=0.115 Sum_probs=77.1 Q ss_pred ccceeecCCcchhHHHHHHHHHHHHHhcCeeEEEeeeeecccccccccc-ccccccceeeeeeeehhhhccCCCcceeee Q lcl|Aclame:pro 30 VNPYFNWVNHTNEQNLTDMLVAESIINRGVECVYLRREMEKVDLVFGED-PMSKFTQNFRMSLYVESFEGWDGDGDWYSK 108 (278) Q Consensus 30 ~npyfN~~g~~~eQ~L~~~LV~E~Iqm~G~dvyYlPRe~v~~D~v~~E~-~~skF~~a~~ieaYl~n~eGf~g~gd~~SK 108 (278) .+.|. .-|+..+ +.|+-+|..|.+.+.+-..-|+-.++. +-+.-...|.+.+.+.+|.--.=+|.+ T Consensus 1 M~~y~------~~~~~a~----~Li~kfG~~vtl~r~~~g~y~~~~g~~~p~~~t~~~~~~~gv~~~~~~~~idGtl--- 67 (122) T protein:vir:97 1 MARFD------SAIALAK----KLIKKNGQAVTLRGFTAGAAPDPAKPWKPGGNVAADQTIEAVFLDYEQRYIDGQT--- 67 (122) T ss_pred Cccch------HHHHHHH----HHHHHhCCceEEEEeccceeCCCCCceecCCceeeeeeeEEEeeccchhhccCcE--- Confidence 22333 2344444 445559999998877766666666652 234446789999999988765544443 Q ss_pred cCceeeeeEEEEEcchhhhhccCCCCCccccEEEecCCCceEEEEeeccCCchhhcCCceEEEEEEEE Q lcl|Aclame:pro 109 FGFQVNDEMNVCINPKLFAQQGDGKQPLMGDLIYFPLANSLFEISWIEREDPWYMNGVLPMRKMKMTK 176 (278) Q Consensus 109 FG~~~~DE~Tf~IS~~rF~~~v~~~rP~EGDLIYfP~~n~lFEI~~VE~e~PFYQ~Gk~yv~~l~ce~ 176 (278) ++..|..-+...... .-.|+-||+|-+ +..-|.|-.|++-+| -|---.|+|...+ T Consensus 68 --I~~GD~~l~~~a~~~------~~~P~~gD~v~~--~g~~~~Vi~v~~i~p---a~~~v~y~lqlRk 122 (122) T protein:vir:97 68 --IRMGDQRVFMPAEGL------TAPPEVEGLVLR--GLEVWKVIAVKPLNP---NGQAIMYELQVRQ 122 (122) T ss_pred --EeecCEEEEEeeCCC------ccccccCCEEEe--CCEEEEEEeccccCC---CCceEEEEEEeeC Confidence 344554443331111 357888999965 677899999977666 4455567777777 No 19 >protein:vir:95373 Length: 101 # NCBI annotation: hypothetical protein # Family: family:all:1410 # MgeID: mge:1567 # MgeName: GBSV1 # Cross-refs: genbank:acc:YP_764479;genbank:gi:115334633;genbank:GeneID:5179260 Probab=26.66 E-value=1.1 Score=20.47 Aligned_cols=95 Identities=14% Similarity=0.254 Sum_probs=52.5 Q ss_pred ceeeeeEEEEEcchhhhhccCCCCCccccEEEecCCCceE-EEEeeccCCchhhc---CCceEEEEEEEEeecCCceecc Q lcl|Aclame:pro 111 FQVNDEMNVCINPKLFAQQGDGKQPLMGDLIYFPLANSLF-EISWIEREDPWYMN---GVLPMRKMKMTKFVYSGEEINL 186 (278) Q Consensus 111 ~~~~DE~Tf~IS~~rF~~~v~~~rP~EGDLIYfP~~n~lF-EI~~VE~e~PFYQ~---Gk~yv~~l~ce~F~Ys~E~idT 186 (278) |+-+|+|+|+ +++.=+.-...+.|.+ .....| .++-|-. .-|||. |-.+-+.+.--.|+|++|.. T Consensus 1 M~~~~~i~Li-~~~~~~D~~G~~~~~~-------~~r~V~~~~ksV~~-sEfy~A~~~G~kpe~~~~i~~~eY~gE~~-- 69 (101) T protein:vir:95 1 MTYDNELVLI-AQEFVEDEIGNQIPIE-------TRKTVLCNVKSVGR-NEFYSAATSGLRPSVVFVVHRYEYSGESE-- 69 (101) T ss_pred CcccceEEec-ceeeeecCCCcccccc-------ceeEEEEEecccCh-hHHHHHHhcCCceEEEEEEehhhcCCCeE-- Confidence 9999999998 6653222222233332 334443 3344433 679874 66788889999999999988 Q ss_pred cCcccccccchhhhhcc-cccccccccccccc-cCC Q lcl|Aclame:pro 187 EKPEAVIDSIDDILNFG-EDTDEMIDIDKINA-LDG 220 (278) Q Consensus 187 g~pe~~id~i~~i~~~~-e~~~~~id~~~i~~-~~G 220 (278) +.++...+-+--- ...++.|.|--... .+| T Consensus 70 ----v~~eg~~Y~I~RTy~~~~e~iEL~c~~~vg~g 101 (101) T protein:vir:95 70 ----VEFEGIRYRVIRTYAVDFEEVELTCERVLAYG 101 (101) T ss_pred ----EEECCEEEEEEEeeeCCCCEEEEEEEEeecCC Confidence 4455444433111 11123344433333 244 No 20 >protein:vir:80114 Length: 101 # NCBI annotation: hypothetical protein # Family: family:all:1410 # MgeID: mge:1877 # MgeName: bacteriophage bv1 # Cross-refs: genbank:acc:YP_001425607;genbank:gi:158348414;genbank:GeneID:5469540 Probab=20.96 E-value=1.7 Score=19.30 Aligned_cols=95 Identities=13% Similarity=0.250 Sum_probs=51.8 Q ss_pred ceeeeeEEEEEcchhhhhccCCCCCccccEEEecCCCceE-EEEeeccCCchhhc---CCceEEEEEEEEeecCCceecc Q lcl|Aclame:pro 111 FQVNDEMNVCINPKLFAQQGDGKQPLMGDLIYFPLANSLF-EISWIEREDPWYMN---GVLPMRKMKMTKFVYSGEEINL 186 (278) Q Consensus 111 ~~~~DE~Tf~IS~~rF~~~v~~~rP~EGDLIYfP~~n~lF-EI~~VE~e~PFYQ~---Gk~yv~~l~ce~F~Ys~E~idT 186 (278) |+-+|+|+|+ +++.=+.-...+.|.+ .....| .++-|- ..-|||. |-.+-+.+.--.|+|.+|.. T Consensus 1 M~~~~~i~Li-~~~~~~D~~G~~~~~~-------~~r~V~~~~ksV~-~sEfy~A~~~G~kpe~~~~i~~~eY~gE~~-- 69 (101) T protein:vir:80 1 MTYDNELVLI-AQEFTEDEIGNQVPIE-------TRRTVLCNVKSVG-RNEFYSAATAGLRPSIVFVIHGYEYDGEQE-- 69 (101) T ss_pred CcccceEEec-ceeeeecCCCcccccc-------ceeEEEEEecccC-hhHHHHHHhcCCceEEEEEEehhhhCCceE-- Confidence 9999999998 6542222222233333 334443 333443 3679864 66788899999999999988 Q ss_pred cCcccccccchhhhhcc-cccccccccccccc-cCC Q lcl|Aclame:pro 187 EKPEAVIDSIDDILNFG-EDTDEMIDIDKINA-LDG 220 (278) Q Consensus 187 g~pe~~id~i~~i~~~~-e~~~~~id~~~i~~-~~G 220 (278) +.++...+-+--- ...+..|.|--... .+| T Consensus 70 ----v~~~g~~Y~I~RTy~~~~e~iEL~c~~~~g~g 101 (101) T protein:vir:80 70 ----VEFESVKYRVIRTYSVSFEEVELTCERVLNDG 101 (101) T ss_pred ----EEECCEEEEEEEeEeCCCCEEEEEEEEeccCC Confidence 3455443332111 11123344433333 233 Done!