Query lcl|Aclame:protein:vir:6894|NCBI_annot:gp18 tail sheath protein|genbank:acc:NP_861870;genbank:gi:32453661;genbank:GeneID:1494296 Match_columns 660 No_of_seqs 220 out of 915 Neff 9.8 Searched_HMMs 1612 Date Sun Dec 1 00:08:12 2013 Command /home/guerois/workspace/virfam/python/lib/hhsearch//hhsearch2 -i .//seq/seq_180 -d /home/guerois/workspace/virfam/python/profile_database/capsid_neck_tail.hhm -glob -cpu 7 -o .//seq/HHR/seq_180_vs_rec_db.hhr No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM 1 protein:vir:6894 Length: 660 # 100.0 2E-172 1E-175 961.6 57.4 660 1-660 1-660 (660) 2 protein:vir:108052 Length: 660 100.0 2E-166 1E-169 929.2 56.0 659 1-659 1-660 (660) 3 protein:vir:101804 Length: 663 100.0 2E-164 1E-167 918.5 53.8 658 1-660 1-662 (663) 4 protein:vir:101187 Length: 663 100.0 3E-164 2E-167 916.9 54.5 658 1-660 1-662 (663) 5 protein:vir:103456 Length: 659 100.0 7E-163 4E-166 909.6 55.2 658 1-659 1-659 (659) 6 protein:vir:80984 Length: 666 100.0 1E-162 6E-166 908.7 54.5 657 1-660 1-665 (666) 7 protein:vir:7206 Length: 659 # 100.0 6E-162 4E-165 904.3 56.6 659 1-659 1-659 (659) 8 protein:vir:6594 Length: 666 # 100.0 5E-162 3E-165 904.8 53.7 657 1-660 1-665 (666) 9 protein:vir:100539 Length: 663 100.0 1E-161 8E-165 902.6 54.2 658 1-660 1-662 (663) 10 protein:vir:106427 Length: 679 100.0 3E-161 2E-164 901.0 54.2 659 1-660 1-679 (679) 11 protein:vir:98263 Length: 664 100.0 9E-161 5E-164 898.1 54.6 657 1-660 1-664 (664) 12 protein:vir:5663 Length: 671 # 100.0 2E-150 1E-153 841.3 51.2 652 1-656 1-671 (671) 13 protein:vir:104477 Length: 749 100.0 1E-140 6E-144 788.0 54.5 635 1-656 1-749 (749) 14 protein:vir:106984 Length: 743 100.0 1E-140 6E-144 788.1 52.8 639 1-657 1-743 (743) 15 protein:vir:104858 Length: 729 100.0 7E-138 4E-141 772.5 52.7 632 1-658 3-729 (729) 16 protein:vir:79092 Length: 477 100.0 3E-108 2E-111 609.8 41.4 469 1-660 1-476 (477) 17 protein:vir:107865 Length: 477 100.0 1E-107 7E-111 606.9 39.6 469 1-658 1-477 (477) 18 protein:vir:98824 Length: 774 100.0 7E-104 5E-107 586.0 36.5 482 1-653 281-774 (774) 19 protein:vir:79181 Length: 390 100.0 6.5E-96 4.1E-99 542.4 35.7 380 1-660 2-390 (390) 20 protein:vir:103993 Length: 390 100.0 8.5E-96 5.3E-99 541.8 35.7 380 1-660 2-390 (390) 21 protein:vir:78206 Length: 390 100.0 8.5E-96 5.3E-99 541.8 35.7 380 1-660 2-390 (390) 22 protein:vir:5711 Length: 396 # 100.0 4.6E-95 2.8E-98 537.8 37.8 386 1-660 1-395 (396) 23 protein:vir:6079 Length: 396 # 100.0 5.8E-95 3.6E-98 537.2 37.6 386 1-660 1-395 (396) 24 protein:vir:79141 Length: 391 100.0 1.7E-95 1.1E-98 540.1 34.5 379 1-657 2-391 (391) 25 protein:vir:103168 Length: 641 100.0 1.7E-94 1.1E-97 534.7 34.6 530 1-556 3-641 (641) 26 protein:vir:2035 Length: 396 # 100.0 5E-94 3.1E-97 532.1 36.5 386 1-660 1-395 (396) 27 protein:vir:98553 Length: 395 100.0 1.5E-93 9.3E-97 529.5 36.8 386 1-660 1-395 (395) 28 protein:vir:1845 Length: 392 # 100.0 2.5E-93 1.6E-96 528.2 36.5 383 1-660 1-392 (392) 29 protein:vir:100323 Length: 393 100.0 8.2E-92 5.1E-95 520.0 37.2 378 1-660 4-392 (393) 30 protein:vir:1172 Length: 391 # 100.0 3.4E-92 2.1E-95 522.0 34.6 380 1-660 3-391 (391) 31 protein:vir:96740 Length: 388 100.0 3.7E-90 2.3E-93 510.9 35.7 375 1-659 4-388 (388) 32 protein:vir:10336 Length: 386 100.0 4.9E-90 3E-93 510.2 35.0 376 1-655 1-386 (386) 33 protein:vir:5833 Length: 742 # 100.0 3.3E-76 2.1E-79 434.4 38.9 556 1-652 147-742 (742) 34 protein:vir:63742 Length: 562 100.0 1.4E-66 8.4E-70 381.7 36.4 532 1-651 9-562 (562) 35 protein:vir:80488 Length: 562 100.0 2E-65 1.2E-68 375.3 38.9 532 1-651 9-562 (562) 36 protein:vir:102819 Length: 648 100.0 4.5E-65 2.8E-68 373.4 36.0 597 1-650 1-648 (648) 37 protein:vir:79798 Length: 717 100.0 1.3E-64 8E-68 370.9 38.5 615 1-646 1-717 (717) 38 protein:vir:80779 Length: 569 100.0 3.4E-63 2.1E-66 363.0 36.7 548 1-651 9-569 (569) 39 protein:vir:95741 Length: 587 100.0 5.8E-63 3.6E-66 361.8 37.6 556 1-651 9-587 (587) 40 protein:vir:99306 Length: 587 100.0 1.7E-60 1.1E-63 348.2 40.7 552 1-651 9-587 (587) 41 protein:vir:96586 Length: 587 100.0 1.9E-58 1.2E-61 337.1 39.7 563 1-651 9-587 (587) 42 protein:vir:100829 Length: 607 100.0 1.6E-52 9.6E-56 304.6 35.0 567 1-657 18-607 (607) 43 protein:vir:102957 Length: 437 100.0 8.7E-50 5.4E-53 289.6 36.5 422 1-645 9-437 (437) 44 protein:vir:101326 Length: 529 100.0 7.7E-45 4.8E-48 262.4 31.3 494 1-646 1-529 (529) 45 protein:vir:105470 Length: 451 100.0 9.3E-41 5.8E-44 240.0 34.0 429 1-645 9-451 (451) 46 protein:vir:107310 Length: 581 100.0 3.7E-37 2.3E-40 220.3 29.6 511 79-660 1-577 (581) 47 protein:vir:7653 Length: 581 # 100.0 6.2E-37 3.8E-40 219.1 28.1 528 58-660 1-577 (581) 48 protein:vir:78986 Length: 436 100.0 9.1E-29 5.7E-32 174.3 29.8 410 1-645 11-436 (436) 49 protein:vir:102359 Length: 356 99.3 2.7E-12 1.7E-15 84.0 19.9 325 261-644 1-356 (356) 50 protein:vir:489 Length: 498 # 99.1 6.1E-10 3.8E-13 71.1 27.2 451 1-649 10-498 (498) 51 protein:vir:4517 Length: 498 # 99.1 1.1E-09 7E-13 69.6 27.4 451 1-649 10-498 (498) 52 protein:vir:4463 Length: 498 # 99.0 3E-09 1.8E-12 67.3 26.9 451 1-649 10-498 (498) 53 protein:vir:3751 Length: 376 # 98.9 1E-08 6.4E-12 64.4 25.0 357 229-653 1-376 (376) 54 protein:vir:3788 Length: 376 # 98.8 5.4E-08 3.4E-11 60.4 28.1 356 229-653 1-376 (376) 55 protein:vir:276 Length: 369 # 98.8 2.9E-08 1.8E-11 61.9 23.3 355 228-649 1-369 (369) 56 protein:vir:78782 Length: 370 98.6 8.9E-08 5.5E-11 59.2 22.4 348 250-656 1-370 (370) 57 protein:vir:1996 Length: 495 # 98.6 1.8E-07 1.1E-10 57.6 30.2 448 1-646 11-495 (495) 58 protein:vir:95263 Length: 450 98.4 7.2E-07 4.4E-10 54.3 26.7 422 143-647 1-450 (450) 59 protein:vir:80052 Length: 331 97.9 9.9E-06 6.1E-09 48.0 24.7 301 274-646 1-331 (331) 60 protein:vir:5260 Length: 502 # 97.5 5.2E-05 3.2E-08 44.1 35.5 466 1-646 1-502 (502) 61 protein:vir:3165 Length: 426 # 95.1 0.0027 1.7E-06 34.6 18.4 362 229-646 1-426 (426) 62 protein:vir:101576 Length: 501 91.9 0.014 8.4E-06 30.8 25.7 430 145-646 1-501 (501) 63 protein:vir:106730 Length: 501 85.8 0.05 3.1E-05 27.7 28.0 425 145-646 1-501 (501) 64 protein:vir:3636 Length: 501 # 84.5 0.06 3.7E-05 27.3 27.4 424 145-646 1-501 (501) 65 protein:vir:99586 Length: 507 84.1 0.063 3.9E-05 27.2 24.8 421 144-645 1-507 (507) 66 protein:vir:96104 Length: 504 71.9 0.19 0.00012 24.5 24.2 418 144-645 1-504 (504) 67 protein:vir:94073 Length: 494 61.6 0.35 0.00022 23.1 23.7 416 136-646 1-494 (494) 68 protein:vir:107720 Length: 515 52.9 0.54 0.00034 22.0 28.1 468 1-645 1-515 (515) 69 protein:vir:78611 Length: 501 23.7 2.3 0.0014 18.6 35.5 451 1-646 1-501 (501) No 1 >protein:vir:6894 Length: 660 # NCBI annotation: gp18 tail sheath protein # Family: family:all:661 # MgeID: mge:140 # MgeName: RB69 # Cross-refs: genbank:acc:NP_861870;genbank:gi:32453661;genbank:GeneID:1494296 Probab=100.00 E-value=2.3e-172 Score=961.55 Aligned_cols=660 Identities=100% Similarity=1.439 Sum_probs=590.2 Q ss_pred CccccCceEEEEecCCcccccCCcCceeEEeecccCCCCccEEecCHHHHHHHcCCcCCcchhHHHHHHHHHhcCCEEEE Q lcl|Aclame:pro 1 MALLSPGVELKETTVQSTVVNNSTGTAALAGKFQWGPAFQIKQITDEVALVDMFGTPNTDTADYFMSAMNFLQYGNDLRV 80 (660) Q Consensus 1 ~~~~~PGVyveE~~~~~~i~gv~Ts~~afvG~~~~Gpv~~p~~i~s~~e~~~~fG~~~~~~~~~~~v~~~f~ngG~~~~v 80 (660) |+||||||||||+|++++|+||+||++||||+|+|||+|+|++|+||.||+|.||++++.+|++|++++||+|||++||| T Consensus 1 ~~~~~PgVyv~e~~~~~~i~~v~ts~~~fvG~~~~Gp~~~p~~i~s~~~~~~~fG~~~~~~~~~~~~~~~f~~~g~~~~v 80 (660) T protein:vir:68 1 MALLSPGVELKETTVQSTVVNNSTGTAALAGKFQWGPAFQIKQITDEVALVDMFGTPNTDTADYFMSAMNFLQYGNDLRV 80 (660) T ss_pred CccccCceEEEEecCCcccccCCCcceeEEecccCCCCccCEEecCHHHHHHhcCCccCccchhHHHHHHHHhCCCeEEE Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred EEccCccccccccccccccccccccccccccccceeEEeccccccccccceeeeecCCceeeEEeecccccccccccccc Q lcl|Aclame:pro 81 VRAVDRDTAKNSSPVAGNINFTISSAGTNYRVGDKVVVKYSTDIIEPDGEVTSVDSDGKILNIFIPSGKIIAKAKEIGEY 160 (660) Q Consensus 81 vRv~~~~~~~~a~~~~~~l~~t~~~~g~~~~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~a~~~~~~ 160 (660) ||+++++..+++....+.+.++...++....+++.++++.........+.+..++.++.....+.+++........+... T Consensus 81 vRv~~~~~~~~~~~~~~~~~~t~~~~g~~~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ta~~~~~a~~~~~~ 160 (660) T protein:vir:68 81 VRAVDRDTAKNSSPVAGNINFTISSAGTNYRVGDKVVVKYSTDIIEPDGEVTSVDSDGKILNIFIPSGKIIAKAKEIGEY 160 (660) T ss_pred EEecccccccccccccccceeeeeccCcceeeeeeeeeecccccccccccceeeeecCceeeeeeccccccccceeeccc Confidence 99999888888888888889999999887788998888887766666677777777777777777666666666666666 Q ss_pred cccccceeeeeeccccccceeeeecccccccccccccccccccccccceeeecccccccccccccccccccccccccccc Q lcl|Aclame:pro 161 PELGSNWTAEMSGSSSGLSAVITIDSVVMDSGILLTEVETSEEAITSLTFQESIKKYGVPGVVALYPGELGDQLEIEIVS 240 (660) Q Consensus 161 ~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~g~~g~~i~v~i~s 240 (660) +..+......+.+..+.......+.+...++................................+.+.+.+++.+++.+.. T Consensus 161 ~~~~~~~~~~v~~~~~~~~~~~~v~~~~~d~~~~~~~~~ta~~~~~~~~~~~~~~~~~~~~~~A~~~g~~G~~i~v~~~~ 240 (660) T protein:vir:68 161 PELGSNWTAEMSGSSSGLSAVITIDSVVMDSGILLTEVETSEEAITSLTFQESIKKYGVPGVVALYPGELGDQLEIEIVS 240 (660) T ss_pred cccccceeEEeecccccceeeeeeccccccccceeeeeccccccccccceeeeecccCccccccccccccccceEEEEec Confidence 66666666666666666666666666666665555444444444444444445555566667788889999999888877 Q ss_pred cccccccceeeeeeccccccccccceeeeeccccCcccceeecccCCcccceeEEeeccccccccccccchhhhhhcCCc Q lcl|Aclame:pro 241 KADYDKGASAQLKIYPDGGTRYSTAKAIFGYGPQTDDQYAIIVRRNDSVVQSVVLSTKRGERDIYGSNIFIDDFFAKGAS 320 (660) Q Consensus 241 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~e~~~v~~~~~~~~~~~~~~~~~~~~~~g~~ 320 (660) .+..................+......++......++.+++.+..++...+++.++...+.....+.......+..++.+ T Consensus 241 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (660) T protein:vir:68 241 KADYDKGASAQLKIYPDGGTRYSTAKAIFGYGPQTDDQYAIIVRRNDSVVQSVVLSTKRGERDIYGSNIFIDDFFAKGAS 320 (660) T ss_pred cccccccccccceeeecccccccceeeEeecccccccceeeeeecCCcceeeeeeecccccccccccceeeehhhccCcc Confidence 77776666666666667777777777777777788888898888999999999998888887777777777788888999 Q ss_pred eEEEEEecCCCcccceeeeeeccccccccccchhhhhhhhhhhhhhhcCcceeecccccCCchhhHHHHHHHHHHHHhhc Q lcl|Aclame:pro 321 NYIFATAQGWPKGFSGVIKLNGGLSSNETVEAGDLMEAWDLFADRESVNAQLFIAGSCAGESLEVASTVQKHVVAIGDSR 400 (660) Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 400 (660) .++.+.....+....+..++.||.++...++..+++.+++++...+.++..++++++...+..++..+++.+|++||+++ T Consensus 321 ~~v~~~~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~v~~~l~~~~~~~ 400 (660) T protein:vir:68 321 NYIFATAQGWPKGFSGVIKLNGGLSSNETVEAGDLMEAWDLFADRESVNAQLFIAGSCAGESLEVASTVQKHVVAIGDSR 400 (660) T ss_pred cEEEEeecCCCccccceeeeccccccccccccchhhhHHHHhhhhhccccceeeccccCCCchHHHHHHHHHHHHHHHhh Confidence 99988888888888888999999999999999999999999999999999999999999998888999999999999999 Q ss_pred cCeEEEeccccceEEecCCCCcHHHHHHHhhhcccccccccccCcceEEEEechhcccccccccceeechHHHHHHHHHH Q lcl|Aclame:pro 401 QDCLVLCSPPRAAVVGIPVNRAVDNLVDWRTASGTYTDNNFNISSTYAAIDGNYKYQYDKYNDVNRWVPLAADIAGLCAR 480 (660) Q Consensus 401 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~p~~~~~d~~~~~~~~~p~s~~~AG~~a~ 480 (660) ++||+++|+|+.++++.+++++++++++||+..+.......+++|+|+++||||++++|+.++..+++|||+++||+||| T Consensus 401 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~p~~~~~d~~~~~~~~~p~sg~~AGl~Ar 480 (660) T protein:vir:68 401 QDCLVLCSPPRAAVVGIPVNRAVDNLVDWRTASGTYTDNNFNISSTYAAIDGNYKYQYDKYNDVNRWVPLAADIAGLCAR 480 (660) T ss_pred CCeEEEEcccceeEecCCCCCCHHHHHHHHhhcccccccccccCcceEEEEcCceEEecccCCceEEechhHHHHHHHHH Confidence 99999999999999999999999999999999999888888999999999999999999999999999999999999999 Q ss_pred hhccCCceecccceeeceeeecccccccCChhhhhhhccccceEEEEecCCeEEEecceecCCCCcccceehhhHHHHHH Q lcl|Aclame:pro 481 TDNISQPWMSPAGYNRGQILNVIKLAIETRQAQRDRLYQEAINPVTGTGGDGYVLYGDKTATSVPSPFDRINVRRLFNMV 560 (660) Q Consensus 481 ~d~~~g~~~span~~~~~v~~~~~~~~~~~~~e~~~Ln~~gin~i~~~~g~G~~~wG~rT~~~~~~~~~~i~vrR~~~~i 560 (660) +|.++||||||+|+++.++.|++++++.++++|++.||++||||||+|+++|+++||+||+++++++||||||||||+|| T Consensus 481 ~d~~~g~~~span~~~~~i~g~~~~~~~~~~~~~~~Ln~~gIn~i~~~~~~G~~~wG~rT~~~~~s~~~~i~vrR~~~~i 560 (660) T protein:vir:68 481 TDNISQPWMSPAGYNRGQILNVIKLAIETRQAQRDRLYQEAINPVTGTGGDGYVLYGDKTATSVPSPFDRINVRRLFNMV 560 (660) T ss_pred HhccCCcEEccCCeeeceeeccceeeecCChhHHHHHhhCCceEEEEecCCeEEEEcceecCCCCcccceEehhhHHHHH Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred HHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhcCCeeeEEEEEecCCCCHHHhhCCEEEEEEEEEecCcceEEEE Q lcl|Aclame:pro 561 KTNIGSASKYRLFELNNAFTRSSFRTETSQYLQGIKALGGVYNFKVVCDTTNNTPAVIDRNEFVATFYLQPARSINYITL 640 (660) Q Consensus 561 ~~~~~~~~~~~v~epn~~~~~~~i~~~i~~~l~~l~~~gal~g~~v~~d~~~nt~~~i~~G~~~~~i~~~p~~p~e~i~~ 640 (660) +++|++.++|+||||||+.||++|+++|++||++||++|+|.||+|+||+++||+++|++|+|+|+|+|+|++|||||+| T Consensus 561 ~~si~~~~~~~v~epn~~~~~~~i~~~i~~~L~~l~~~gal~gf~V~~d~~~nt~~~i~~G~~~~~i~~~p~~pae~i~l 640 (660) T protein:vir:68 561 KTNIGSASKYRLFELNNAFTRSSFRTETSQYLQGIKALGGVYNFKVVCDTTNNTPAVIDRNEFVATFYLQPARSINYITL 640 (660) T ss_pred HHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhcCceeeeEEEEecCCCCHHHhhCCeEEEEEEEEecCCcceEEE Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred EEEEeecCccHHHHHHhhcC Q lcl|Aclame:pro 641 NFVATATGADFDELIGAVGG 660 (660) Q Consensus 641 ~~~~~~~~~~~~e~~~~v~~ 660 (660) ||+|++++++|+|++++|+| T Consensus 641 ~~~~~~~~~~~~e~~~~v~~ 660 (660) T protein:vir:68 641 NFVATATGADFDELIGAVGG 660 (660) T ss_pred EEEEeecCccHHHHHHhhcC Confidence 99999999999999999999 No 2 >protein:vir:108052 Length: 660 # NCBI annotation: gp18 tail sheath protein # Family: family:all:661 # MgeID: mge:2002 # MgeName: JS98 # Cross-refs: genbank:acc:YP_001595294;genbank:gi:161622600;genbank:GeneID:5783771 Probab=100.00 E-value=1.8e-166 Score=929.20 Aligned_cols=659 Identities=72% Similarity=1.176 Sum_probs=556.9 Q ss_pred CccccCceEEEEecCCcccccCCcCceeEEeecccCCCCccEEecCHHHHHHHcCCcCCcchhHHHHHHHHHhcCCEEEE Q lcl|Aclame:pro 1 MALLSPGVELKETTVQSTVVNNSTGTAALAGKFQWGPAFQIKQITDEVALVDMFGTPNTDTADYFMSAMNFLQYGNDLRV 80 (660) Q Consensus 1 ~~~~~PGVyveE~~~~~~i~gv~Ts~~afvG~~~~Gpv~~p~~i~s~~e~~~~fG~~~~~~~~~~~v~~~f~ngG~~~~v 80 (660) |+|+||||||||+|++++|+||+||++||||+|+|||+|+|++|+||.||++.||++++.+|++|++++||+|||++||| T Consensus 1 ~~~~~Pgvyv~e~~~~~~i~~~~t~~~~~vg~~~~gp~~~p~~v~s~~~~~~~fg~~~~~~~~~~~~~~~f~~~g~~~~v 80 (660) T protein:vir:10 1 MALLSPGIELKETSVQSTVVRNATGRAALVGKFQWGPAFQVTQITNEVELVDLFGGPNNEVADYFMSGMNFLQYGNDLRT 80 (660) T ss_pred CceecCceEEEeecCCccccCCCcccceEEeecCCCCCccCeEcCCHHHHHHHcCCcCCCchhHHHHHHHHHhCCceEEE Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred EEccCccccccccccccccccccccccccccccceeEEeccccccccccceeeeecCCceeeEEeecccccccccccccc Q lcl|Aclame:pro 81 VRAVDRDTAKNSSPVAGNINFTISSAGTNYRVGDKVVVKYSTDIIEPDGEVTSVDSDGKILNIFIPSGKIIAKAKEIGEY 160 (660) Q Consensus 81 vRv~~~~~~~~a~~~~~~l~~t~~~~g~~~~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~a~~~~~~ 160 (660) ||+++.+..+++....+.+.+++..++....|++.+++.+........+.+..++.++.....+.++......+..+... T Consensus 81 vrv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~v~~~~a~g~~~~~~~~ta~~~~~a~~v~~~ 160 (660) T protein:vir:10 81 VRVVSREFAKNASPIAGNIETTITTAGSNYAVGDKINIKYNQTVVESEGRVTSVDTDGKILSVFIPSAKIIAYARSLNQY 160 (660) T ss_pred EEecccccccccccccccceeEEeeccccccccceeeEeeccccccccccceeeccccceeeeccccccccccccccccc Confidence 99999888878888888888999889988889999999887776666666666766666555555555444444444444 Q ss_pred cccccceeeeeeccccccceeeeecccccccccccccccccccccccceeeecccccccccccccccccccccccccccc Q lcl|Aclame:pro 161 PELGSNWTAEMSGSSSGLSAVITIDSVVMDSGILLTEVETSEEAITSLTFQESIKKYGVPGVVALYPGELGDQLEIEIVS 240 (660) Q Consensus 161 ~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~g~~g~~i~v~i~s 240 (660) +.........+.+..........+...+.+....+............................+...+.+++.+.+.+.+ T Consensus 161 ~~~~~~~~~~~~~~~~~~~~a~sv~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~g~~G~~i~v~i~~ 240 (660) T protein:vir:10 161 PTLGPAWTAEVTSASSGVSGTITVGKIVTDSGILLTEAENSEEAITSLEFQAALKKFAMPGVVALYPGEIGSTLEVEIVS 240 (660) T ss_pred cccccceeEEEecccCccccceeeeeeeccCcceEEeeeccccccccccceeeccccccceeeeecccccCcceeEEEee Confidence 44444444444444444444444444444443333322222222222223333334444555667788888888887776 Q ss_pred cccccccceeeeeeccccccccccceeeeeccccCcccceeecccCCcccceeEEeeccccccccccccchhhhhhcCCc Q lcl|Aclame:pro 241 KADYDKGASAQLKIYPDGGTRYSTAKAIFGYGPQTDDQYAIIVRRNDSVVQSVVLSTKRGERDIYGSNIFIDDFFAKGAS 320 (660) Q Consensus 241 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~e~~~v~~~~~~~~~~~~~~~~~~~~~~g~~ 320 (660) ..+............+...............+...++.+.+.+..++...+++.++...+.+...+.......+..++++ T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (660) T protein:vir:10 241 KAAYEAGSSKMLDVYPGGGTRASIAKAVFNYGPQTDDQYAIIVRRDGAIVESVVLSTKEGEKDVYGNNIYLDDYFAKGTS 320 (660) T ss_pred ccccCCcceeEEeeeeccceeeEEeeeecccccccccccccccccCCcccceeeeeccccccccccceeeeehhhcCCCc Confidence 66665555555555555555554445555556677788888888899999999988888777777777777777888888 Q ss_pred eEEEEEecCCCcccceeeeeeccccccccccchhhhhhhhhhhhhhhcCcceeecccccCCchhhHHHHHHHHHHHHhhc Q lcl|Aclame:pro 321 NYIFATAQGWPKGFSGVIKLNGGLSSNETVEAGDLMEAWDLFADRESVNAQLFIAGSCAGESLEVASTVQKHVVAIGDSR 400 (660) Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 400 (660) .++.......+......+++.||.++...++..+++.+++.+...+.+.+++++.+...........+|+.+|++||+++ T Consensus 321 ~~v~~~~~~~~~~~~~~~~l~gg~~~~~~~t~~~~~~~~~~~~~~~~~~~~~l~~p~~~~~~~~~~~~v~~al~~~~~~~ 400 (660) T protein:vir:10 321 NYIYATSLNWPKGFSGIINLSGGISANDKVTAGDLMQGWDLFADREALHINLLIAGAVAGEGDEVASTVQKHVVSIADER 400 (660) T ss_pred cEEEEEeccCCCCcccceeeeccccCccccccchhhhhhhhhhhhhhcccceEEEcCcCCCchhhhHHHHHHHHHHHHhh Confidence 88887777777777788899999999888888899999999998888888887777666666677888999999999999 Q ss_pred cCeEEEeccccceEEecCCCCcHHHHHHHhhhcccccccccccCcceEEEEechhcccccccccceeechHHHHHHHHHH Q lcl|Aclame:pro 401 QDCLVLCSPPRAAVVGIPVNRAVDNLVDWRTASGTYTDNNFNISSTYAAIDGNYKYQYDKYNDVNRWVPLAADIAGLCAR 480 (660) Q Consensus 401 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~p~~~~~d~~~~~~~~~p~s~~~AG~~a~ 480 (660) ++||+++|+|+...++...+++++++.+||+..+.......+++|+|+++||||++++|+.+++.+++|||+++||+||| T Consensus 401 ~~~~aiid~p~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~s~~~~~~~p~~~~~d~~~~~~~~~p~sg~~AGl~Ar 480 (660) T protein:vir:10 401 QDCLAFISPPKGLLVNVPLTRAVDNLIDWRTGAGTFDANNMNISTTYAAIDGNYKYQYDKYNDVNRWVPLAADLAGLCAR 480 (660) T ss_pred CCEEEEEecCcccccccccccCHHHHHHHHhhcccccccccccCcceEEEEcCceEEecccCCceeEechhHHHHHHHHH Confidence 99999999999888899999999999999999999888888999999999999999999999999999999999999999 Q ss_pred hhccCCceecccceeeceeeecccccccCChhhhhhhccccceEEEEecC-CeEEEecceecCCCCcccceehhhHHHHH Q lcl|Aclame:pro 481 TDNISQPWMSPAGYNRGQILNVIKLAIETRQAQRDRLYQEAINPVTGTGG-DGYVLYGDKTATSVPSPFDRINVRRLFNM 559 (660) Q Consensus 481 ~d~~~g~~~span~~~~~v~~~~~~~~~~~~~e~~~Ln~~gin~i~~~~g-~G~~~wG~rT~~~~~~~~~~i~vrR~~~~ 559 (660) +|.++||||||+|+++.++.|+.++++.+++.|++.||++|||||++|++ +|+++||+||++++|++|+||||||||+| T Consensus 481 ~D~~~g~~~sPan~~~~~i~g~~~~~~~~~~~e~~~Ln~~gIn~i~~~~~~~G~~~wG~rT~~~~~s~~~~i~vrR~~~~ 560 (660) T protein:vir:10 481 TDDVSQPWMSPAGYNRGQILNVLKLAIEPRQAQRDRMYQEAINPVVGFAGGDGFVLFGDKTATKVPSPMDHINVRRLFNM 560 (660) T ss_pred hhccCCcEEccCCeeeceeeccceeeecCChhhHHhHhhCCceEEEEeeCCCcEEEEcccccCCCCcccceEehhhHHHH Confidence 99999999999999999999999999999999999999999999999986 79999999999999999999999999999 Q ss_pred HHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhcCCeeeEEEEEecCCCCHHHhhCCEEEEEEEEEecCcceEEE Q lcl|Aclame:pro 560 VKTNIGSASKYRLFELNNAFTRSSFRTETSQYLQGIKALGGVYNFKVVCDTTNNTPAVIDRNEFVATFYLQPARSINYIT 639 (660) Q Consensus 560 i~~~~~~~~~~~v~epn~~~~~~~i~~~i~~~l~~l~~~gal~g~~v~~d~~~nt~~~i~~G~~~~~i~~~p~~p~e~i~ 639 (660) |+++|++.++|+||||||+.||++|+++|++||++||++|+|.||+|+||+++||++||++|+|+|+|+++|++|||||+ T Consensus 561 i~~si~~~~~~~v~epn~~~l~~~i~~~i~~fL~~l~~~gal~g~~V~~d~~~nt~~di~~G~~~~~i~~~P~~pae~I~ 640 (660) T protein:vir:10 561 LKKNIGDASKYKLFELNDNFTRSSFRMEVSQYLDGIKALGGIYEGRVVCDTTVNTPAVIDRNEFIANIYVKPARSINYIT 640 (660) T ss_pred HHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeEEEEcCCCCCHHHhhCCeEEEEEEEEecCCccEEE Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred EEEEEeecCccHHHHHHhhc Q lcl|Aclame:pro 640 LNFVATATGADFDELIGAVG 659 (660) Q Consensus 640 ~~~~~~~~~~~~~e~~~~v~ 659 (660) |||+|++++++|+|++++|. T Consensus 641 ~~~~~~~~~~~~~e~~~~~~ 660 (660) T protein:vir:10 641 LNFVATSTGADFDELIGPLV 660 (660) T ss_pred EEEEEeecCccHHHHhhhcC Confidence 99999999999999999999 No 3 >protein:vir:101804 Length: 663 # NCBI annotation: gp18 # Family: family:all:661 # MgeID: mge:1580 # MgeName: 31 # Cross-refs: genbank:acc:YP_238881;genbank:gi:66391956;genbank:GeneID:3416631 Probab=100.00 E-value=1.6e-164 Score=918.51 Aligned_cols=658 Identities=61% Similarity=1.058 Sum_probs=559.0 Q ss_pred CccccCceEEEEecCCcccccCCcCceeEEeecccCCCCccEEecCHHHHHHHcCCcCCcchhHHHHHHHHHhcCCEEEE Q lcl|Aclame:pro 1 MALLSPGVELKETTVQSTVVNNSTGTAALAGKFQWGPAFQIKQITDEVALVDMFGTPNTDTADYFMSAMNFLQYGNDLRV 80 (660) Q Consensus 1 ~~~~~PGVyveE~~~~~~i~gv~Ts~~afvG~~~~Gpv~~p~~i~s~~e~~~~fG~~~~~~~~~~~v~~~f~ngG~~~~v 80 (660) |+|+||||||||+|++++|+||+||++||||+|+|||+|+|++|+||.||++.||++.+.+|++|++++||+|||++||| T Consensus 1 ~~~~~Pgvyv~e~~~~~~i~~~~t~~~~~vG~~~~Gp~~~p~~v~~~~~~~~~fg~~~~~~~~~~~~~~~f~ngg~~~~v 80 (663) T protein:vir:10 1 MALLSPGIEMKETSINSTVVRSATGRAAIVGKFAWGPAYEVRQVTNEVELVDMFGSPDNVTAPYFMSAMNFLQYGNDLRL 80 (663) T ss_pred CceecCceEEEEecCCccccccCcccceeEeecccCCCCccEEecCHHHHHHhcCCcCCcchhHHHHHHHHHhCCCeEEE Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred EEccCccccccccccccccccccccccccccccceeEEeccccccccccceeeeecCCceeeEEeecccccccccccccc Q lcl|Aclame:pro 81 VRAVDRDTAKNSSPVAGNINFTISSAGTNYRVGDKVVVKYSTDIIEPDGEVTSVDSDGKILNIFIPSGKIIAKAKEIGEY 160 (660) Q Consensus 81 vRv~~~~~~~~a~~~~~~l~~t~~~~g~~~~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~a~~~~~~ 160 (660) ||+++++..+++....+.+..+...++....+++.+.+............+..+.+++........+.........+... T Consensus 81 vRv~~~~~~~~a~~~~~~~~~~~~~~~~~~~~g~~i~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~ta~~~~~~~~v~~~ 160 (663) T protein:vir:10 81 VRVIDMEKAKNASPLVNQVSVTITTEGQGYTVGDAITVKYNNATITEAGKVTAVDSDGKIKSLFVPTAEIIAKTRQLGTY 160 (663) T ss_pred EEccCCccccccccccccceeEEeecccccccccccccccccccccccccceeeecccceEEEeeccccccccccccccc Confidence 99999888888877777777888888877789999988877776666667777777777766666665554444444444 Q ss_pred cccccceeeeeeccccccceeeeecccccccccccccccccccccccceeeecccccccccccccccccccccccccccc Q lcl|Aclame:pro 161 PELGSNWTAEMSGSSSGLSAVITIDSVVMDSGILLTEVETSEEAITSLTFQESIKKYGVPGVVALYPGELGDQLEIEIVS 240 (660) Q Consensus 161 ~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~g~~g~~i~v~i~s 240 (660) +.............+..............+....+..........+...............+.+..+|.+++.+.+.+.+ T Consensus 161 ~~~~~~~~~~~s~~s~~~~~a~~v~~v~~d~~~~v~~~~~a~~~~t~~~~~~~~~~~~~~~i~A~~~G~~Gn~i~V~i~~ 240 (663) T protein:vir:10 161 PTLGDNWRIDVSGASGGSAAALALGNIVVDSGVTFGNSEDAPAVMTSPAVMEKYAKFGMPLISAVYPGEIGSTVEVEIVS 240 (663) T ss_pred eeeccceeeEeeeccCccccccccceeccccceEEeeccccccccccccccccccccccceEEeccCCcccceeeeeecc Confidence 44444444444444444444444444444444444333333333333334444444555667788899999998887766 Q ss_pred cccccccceeeeeeccccccccccceeeeeccccCcccceeecccCCcccceeEEeeccccccccccccchhhhhhcCCc Q lcl|Aclame:pro 241 KADYDKGASAQLKIYPDGGTRYSTAKAIFGYGPQTDDQYAIIVRRNDSVVQSVVLSTKRGERDIYGSNIFIDDFFAKGAS 320 (660) Q Consensus 241 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~e~~~v~~~~~~~~~~~~~~~~~~~~~~g~~ 320 (660) ....... ....+.+....+......+.......++.+.+.+..++...+.+.++...+.+...+...+......++++ T Consensus 241 ~~~~~~~--~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~ 318 (663) T protein:vir:10 241 KTAFNSG--AQQTIYPFGGTRTSNARGVIQYGPMTDDQFAIIVRRDGIVVESTVLSTRKGDRDVYGSNIFMDDYFRNGGS 318 (663) T ss_pred ccccccc--cccceecccccccccccceeecccccccceeeEeecCCcceeeecccccccccccccchhhhhhhhcCCcc Confidence 5444332 22334455555666666666667778888888888888888988888888888888877788888888999 Q ss_pred eEEEEEecCCCcccceeeeeeccccccccccchhhhhhhhhhhhhhhcCcceeecccccCCchhhHHHHHHHHHHHHhhc Q lcl|Aclame:pro 321 NYIFATAQGWPKGFSGVIKLNGGLSSNETVEAGDLMEAWDLFADRESVNAQLFIAGSCAGESLEVASTVQKHVVAIGDSR 400 (660) Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 400 (660) .++.+.....+......+++.||.+++..++..+++++++.+...+.+.+.+++++.......+...+|+.+|++||+++ T Consensus 319 ~~~~~~~~~~~~~~~~~~~l~gg~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~~~~~~~~~~~~v~~~l~~~a~~~ 398 (663) T protein:vir:10 319 NFIFASSEGWPAGFTGIIQLGGGTSANADVGADELIKGWDLFSDREALHVNLMIAGACGSDGAEIASTVQKYVVSLADDR 398 (663) T ss_pred eEEEEeecccCccccceeEeccccCCccccchhhhHHHHHhhhcccccceeEEEeccCCCCchhhHHHHHHHHHHHHHhh Confidence 98888888888888888999999999999999999999999999999888888888777777777889999999999999 Q ss_pred cCeEEEeccccceEEecCCCCcHHHHHHHhhhccc---ccccccccCcceEEEEechhcccccccccceeechHHHHHHH Q lcl|Aclame:pro 401 QDCLVLCSPPRAAVVGIPVNRAVDNLVDWRTASGT---YTDNNFNISSTYAAIDGNYKYQYDKYNDVNRWVPLAADIAGL 477 (660) Q Consensus 401 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~s~~~~~~~p~~~~~d~~~~~~~~~p~s~~~AG~ 477 (660) ++||+++|+|+...+.....++.+++.+||+.... ......+++|+|+++||||++++|+.++..+++|||+++||+ T Consensus 399 ~~~~ai~d~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~p~~~~~d~~~~~~~~~p~sg~vAGl 478 (663) T protein:vir:10 399 QDCVAIVNPPAELMVGIPTSTAVKNIVEWRNGMTGSGEVVDNNMNISSTYAFIIGNYKYQYDKYNDINRWVPLAADIAGL 478 (663) T ss_pred CCEEEEEecCcccccccccccchHHHHHHHHhccccccchhhhcccCccceEEEcCceEEecccCCceEEechhHHHHHH Confidence 99999999998887777778899999999987543 233445789999999999999999999999999999999999 Q ss_pred HHHhhccCCceecccceeeceeeecccccccCChhhhhhhccccceEEEEecC-CeEEEecceecCCCCcccceehhhHH Q lcl|Aclame:pro 478 CARTDNISQPWMSPAGYNRGQILNVIKLAIETRQAQRDRLYQEAINPVTGTGG-DGYVLYGDKTATSVPSPFDRINVRRL 556 (660) Q Consensus 478 ~a~~d~~~g~~~span~~~~~v~~~~~~~~~~~~~e~~~Ln~~gin~i~~~~g-~G~~~wG~rT~~~~~~~~~~i~vrR~ 556 (660) |||+|.++||||||+|+++.++.+++++++.+++.|++.||++|||||++|++ +|+++||+||++++|++|+||||||| T Consensus 479 ~Ar~D~~~g~~~sPan~~~~~i~g~~~~~~~~~~~e~~~Ln~~gin~i~~~~~~~G~~~wG~rT~~~~~s~~~~i~vrR~ 558 (663) T protein:vir:10 479 CAYTDQVSHPWMSPAGYRRGQIRNCIKLAIEPKQSMRDTMYQVAINPVTGFAGGDGFVLFGDKMATQVPSPFDRINVRRL 558 (663) T ss_pred HHHhhccCCceEccCCceeccccccccceeecChhHHHHHhhCCceEEEEEeCCCcEEEEcccccCCCCcccceEehhhH Confidence 99999999999999999999999999999999999999999999999999997 79999999999999899999999999 Q ss_pred HHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhcCCeeeEEEEEecCCCCHHHhhCCEEEEEEEEEecCcce Q lcl|Aclame:pro 557 FNMVKTNIGSASKYRLFELNNAFTRSSFRTETSQYLQGIKALGGVYNFKVVCDTTNNTPAVIDRNEFVATFYLQPARSIN 636 (660) Q Consensus 557 ~~~i~~~~~~~~~~~v~epn~~~~~~~i~~~i~~~l~~l~~~gal~g~~v~~d~~~nt~~~i~~G~~~~~i~~~p~~p~e 636 (660) |+||+++|++.++|+||||||+.||.+|+++|+.||++||++|+|.||+|+||+++||+++|++|+|+|+|+|+|++|+| T Consensus 559 ~~~i~~si~~~~~~~v~epn~~~l~~~i~~~i~~~L~~l~~~gal~g~~v~~d~~~nt~~~i~~G~~~~~i~~~p~~pae 638 (663) T protein:vir:10 559 FNMLKKNIGDTSKYELFENNDAFTRQSFRMETSQYLDGIRSLGGCYDFRVVCDTTNNTPNVIDRNEFVGTIYVKPPRSIN 638 (663) T ss_pred HHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeEEEEcCCCCCHHHhhCCeEEEEEEEEecCCcc Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred EEEEEEEEeecCccHHHHHHhhcC Q lcl|Aclame:pro 637 YITLNFVATATGADFDELIGAVGG 660 (660) Q Consensus 637 ~i~~~~~~~~~~~~~~e~~~~v~~ 660 (660) ||+|||+|++++++|+|++++|.= T Consensus 639 ~i~~~~~~~~~~~~~~e~~~~~~~ 662 (663) T protein:vir:10 639 YITLNMVATSTGANFDELIGPMQL 662 (663) T ss_pred eEEEEEEEeecCccHHHHHHHHhc Confidence 999999999999999999999999 No 4 >protein:vir:101187 Length: 663 # NCBI annotation: tail sheath protein # Family: family:all:661 # MgeID: mge:1582 # MgeName: 44RR2.8t # Cross-refs: genbank:acc:NP_932509;genbank:gi:37651635;genbank:GeneID:2610680 Probab=100.00 E-value=3.2e-164 Score=916.94 Aligned_cols=658 Identities=61% Similarity=1.054 Sum_probs=553.6 Q ss_pred CccccCceEEEEecCCcccccCCcCceeEEeecccCCCCccEEecCHHHHHHHcCCcCCcchhHHHHHHHHHhcCCEEEE Q lcl|Aclame:pro 1 MALLSPGVELKETTVQSTVVNNSTGTAALAGKFQWGPAFQIKQITDEVALVDMFGTPNTDTADYFMSAMNFLQYGNDLRV 80 (660) Q Consensus 1 ~~~~~PGVyveE~~~~~~i~gv~Ts~~afvG~~~~Gpv~~p~~i~s~~e~~~~fG~~~~~~~~~~~v~~~f~ngG~~~~v 80 (660) |+|+||||||||+|++++|+||+||++||||+|+|||+|+|++|+||.||+|.||++.+.+|++|+|++||+|||++||| T Consensus 1 ~~~~~PgVyv~e~~~~~~i~~v~ts~~~fvG~~~~Gp~~~p~~i~s~~d~~~~fG~~~~~~~~~~~v~~~f~ngg~~~~v 80 (663) T protein:vir:10 1 MALLSPGIEMKETSINSTVVRSATGRAAIVGKFAWGPAYEVRQVTNEVELVDMFGSPDNVTAPYFMSAMNFLQYGNDLRL 80 (663) T ss_pred CceecCceEEEEecCcccccccCccceeEEeeeccCCCCccEEecCHHHHHHHhCCcCccchhHHHHHHHHHhCCCeEEE Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred EEccCccccccccccccccccccccccccccccceeEEeccccccccccceeeeecCCceeeEEeecccccccccccccc Q lcl|Aclame:pro 81 VRAVDRDTAKNSSPVAGNINFTISSAGTNYRVGDKVVVKYSTDIIEPDGEVTSVDSDGKILNIFIPSGKIIAKAKEIGEY 160 (660) Q Consensus 81 vRv~~~~~~~~a~~~~~~l~~t~~~~g~~~~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~a~~~~~~ 160 (660) ||+++++..+++....+....+...++....+++.+++...............+.+++.....+.++.........+... T Consensus 81 vRv~~~~~~~~a~~~~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~~~~n~~~~~v~~~~a~~~~~~~~v~~~ 160 (663) T protein:vir:10 81 VRVIDMEKAKNASPLVNQVSVTITTEGQGYTVGDAITVKYNNATITEAGKVTAVDSDGKIKSLFVPTAEIIAKTRQLGTY 160 (663) T ss_pred EEccCCcccccccccCCcceeeeeccccCccccccccccccccccccccceeeeccCCceEEEEecccccccccccccee Confidence 99999888877777777777777777777788999888877766666677778888877766666665544444444444 Q ss_pred cccccceeeeeeccccccceeeeecccccccccccccccccccccccceeeecccccccccccccccccccccccccccc Q lcl|Aclame:pro 161 PELGSNWTAEMSGSSSGLSAVITIDSVVMDSGILLTEVETSEEAITSLTFQESIKKYGVPGVVALYPGELGDQLEIEIVS 240 (660) Q Consensus 161 ~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~g~~g~~i~v~i~s 240 (660) ..........+....+...........+.+.................................+.+++.+++.+.+.+.+ T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~v~~vv~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~a~~~G~~Gn~i~v~i~~ 240 (663) T protein:vir:10 161 PTLGDNWRIDVSGASGGSAAALALGNIVVDSGVTFGNSEDAPAVMTSPAVMEKYAKFGMPLVSAVYPGEIGSTVEVEIVS 240 (663) T ss_pred eeccccceeEeeeccccccccccccceecccceeeEeeccccccccccchhhhcccccceeeeeecccccccceeEEecc Confidence 44333333333333333333333333333333333333333333333333334444555567788899999988877665 Q ss_pred cccccccceeeeeeccccccccccceeeeeccccCcccceeecccCCcccceeEEeeccccccccccccchhhhhhcCCc Q lcl|Aclame:pro 241 KADYDKGASAQLKIYPDGGTRYSTAKAIFGYGPQTDDQYAIIVRRNDSVVQSVVLSTKRGERDIYGSNIFIDDFFAKGAS 320 (660) Q Consensus 241 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~e~~~v~~~~~~~~~~~~~~~~~~~~~~g~~ 320 (660) ...... .....+......+......+.......+..+.+.+..++...+.+.++...+.+...+...+....+.++++ T Consensus 241 ~~~~~~--~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~ 318 (663) T protein:vir:10 241 KTAFNS--GAQQTIYPFGGTRTSNARGVIQYGPMTDDQFAIIVRRDGIVVESTVLSTRKGDRDVYGSNIFMDDYFRNGGS 318 (663) T ss_pred cccccc--cccccccccccccccccceeeeeccccccceeEEEecCCcceeeeeeeecccccccchhhhhhhhhhccCcc Confidence 443322 233344455555666666666667777788888888888888888888888888888877778888888888 Q ss_pred eEEEEEecCCCcccceeeeeeccccccccccchhhhhhhhhhhhhhhcCcceeecccccCCchhhHHHHHHHHHHHHhhc Q lcl|Aclame:pro 321 NYIFATAQGWPKGFSGVIKLNGGLSSNETVEAGDLMEAWDLFADRESVNAQLFIAGSCAGESLEVASTVQKHVVAIGDSR 400 (660) Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 400 (660) .++.+.....+...+..+++.||.++...++..+++++++.+...+.+.+++++++...........+|+.+|++||+++ T Consensus 319 ~~~~~~~~~~~~~~~~~~~l~gg~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~~~~~~~~~~~~v~~al~~~a~~~ 398 (663) T protein:vir:10 319 NFIFASSEGWPAGFTGIIQLGGGTSANADVGADELIKGWDLFSDREALHVNLMIAGACGSDGAEIASTVQKYVVSLADDR 398 (663) T ss_pred eEEEEeecccCccccceeEcccccCCCccccchhhHHHHHhhhcccccceeEEEeccCCCCchhhHHHHHHHHHHHHHhh Confidence 98888888888888888999999999999999999999999999998888888888877777778889999999999999 Q ss_pred cCeEEEeccccceEEecCCCCcHHHHHHHhhhcccc---cccccccCcceEEEEechhcccccccccceeechHHHHHHH Q lcl|Aclame:pro 401 QDCLVLCSPPRAAVVGIPVNRAVDNLVDWRTASGTY---TDNNFNISSTYAAIDGNYKYQYDKYNDVNRWVPLAADIAGL 477 (660) Q Consensus 401 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~s~~~~~~~p~~~~~d~~~~~~~~~p~s~~~AG~ 477 (660) ++||+++|+|+..........+.+++++||+..... .....+++|+|+++||||++++|+.+++.+++|||+++||+ T Consensus 399 ~~~~ai~d~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~P~~~~~d~~~~~~~~~p~s~~vAGl 478 (663) T protein:vir:10 399 QDCVAIVNPPAELMVGIPTSTAVKNIVEWRNGMTGSGEVVDNNMNISSTYAFIIGNYKYQYDKYNDINRWVPLAADIAGL 478 (663) T ss_pred CCEEEEEecCcccccccccccchHHHHHHHHhccccccchhhccccCcceEEEEccceEEecccCCceEEechhHHHHHH Confidence 999999999988877777889999999999875532 23445789999999999999999999999999999999999 Q ss_pred HHHhhccCCceecccceeeceeeecccccccCChhhhhhhccccceEEEEecC-CeEEEecceecCCCCcccceehhhHH Q lcl|Aclame:pro 478 CARTDNISQPWMSPAGYNRGQILNVIKLAIETRQAQRDRLYQEAINPVTGTGG-DGYVLYGDKTATSVPSPFDRINVRRL 556 (660) Q Consensus 478 ~a~~d~~~g~~~span~~~~~v~~~~~~~~~~~~~e~~~Ln~~gin~i~~~~g-~G~~~wG~rT~~~~~~~~~~i~vrR~ 556 (660) |||+|.++||||||+|++++++.|++++++.+++.|++.||++|||||++|++ +|+++||+||++++|++|+||||||| T Consensus 479 ~Ar~D~~~g~~~sPan~~~~~i~g~~~~~~~~~~~~~~~Ln~~gin~i~~~~~~~G~~~wG~rT~s~~~s~~~~i~vrR~ 558 (663) T protein:vir:10 479 CAYTDQVSHPWMSPAGYRRGQIRNCIKLAIEPKQSMRDTMYQVAINPVTGFAGGDGFVLFGDKMATQVPSPFDRINVRRL 558 (663) T ss_pred HHHhhccCCceEccCCceeccccccccceeccChhHHHHHhhCCceEEEEEeCCCcEEEEcccccCCCCcccceEehhhH Confidence 99999999999999999999999999999999999999999999999999997 79999999999999899999999999 Q ss_pred HHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhcCCeeeEEEEEecCCCCHHHhhCCEEEEEEEEEecCcce Q lcl|Aclame:pro 557 FNMVKTNIGSASKYRLFELNNAFTRSSFRTETSQYLQGIKALGGVYNFKVVCDTTNNTPAVIDRNEFVATFYLQPARSIN 636 (660) Q Consensus 557 ~~~i~~~~~~~~~~~v~epn~~~~~~~i~~~i~~~l~~l~~~gal~g~~v~~d~~~nt~~~i~~G~~~~~i~~~p~~p~e 636 (660) |+||+++|++.++|+||||||+.+|++|+++|++||++||++|+|.||+|+||+++||+++|++|+|+|+|+|+|++||| T Consensus 559 ~~~i~~si~~~~~~~v~e~n~~~l~~~i~~~i~~~L~~l~~~gal~g~~v~~d~~~nt~~~i~~G~~~~~i~~~p~~pae 638 (663) T protein:vir:10 559 FNMLKKNIGDTSKYELFENNDAFTRQSFRMETSQYLDGIRSLGGCYDFRVVCDTTNNTPNVIDRNEFVGTIYVKPPRSIN 638 (663) T ss_pred HHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhcCceeeeEEEEcCCCCCHHHhhCCeEEEEEEEEecCCcc Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred EEEEEEEEeecCccHHHHHHhhcC Q lcl|Aclame:pro 637 YITLNFVATATGADFDELIGAVGG 660 (660) Q Consensus 637 ~i~~~~~~~~~~~~~~e~~~~v~~ 660 (660) ||+|||+|++++++|+|+++.|+= T Consensus 639 ~i~~~~~~~~~~~~~~e~~~~~~~ 662 (663) T protein:vir:10 639 YITLNMVATSTGANFDELIGPMQL 662 (663) T ss_pred eEEEEEEEeecCccHHHHHHHHhc Confidence 999999999999999999999999 No 5 >protein:vir:103456 Length: 659 # NCBI annotation: tail sheath monomer # Family: family:all:661 # MgeID: mge:1542 # MgeName: RB32 # Cross-refs: genbank:acc:YP_803108;genbank:gi:116326388;genbank:GeneID:4405485 Probab=100.00 E-value=6.9e-163 Score=909.61 Aligned_cols=658 Identities=83% Similarity=1.295 Sum_probs=540.7 Q ss_pred CccccCceEEEEecC-CcccccCCcCceeEEeecccCCCCccEEecCHHHHHHHcCCcCCcchhHHHHHHHHHhcCCEEE Q lcl|Aclame:pro 1 MALLSPGVELKETTV-QSTVVNNSTGTAALAGKFQWGPAFQIKQITDEVALVDMFGTPNTDTADYFMSAMNFLQYGNDLR 79 (660) Q Consensus 1 ~~~~~PGVyveE~~~-~~~i~gv~Ts~~afvG~~~~Gpv~~p~~i~s~~e~~~~fG~~~~~~~~~~~v~~~f~ngG~~~~ 79 (660) |+|+||||||||++. +++| +++||++||||+|+|||+|+|++|+||.||+|.||+++..+|++|+|++||+|||++|| T Consensus 1 ~~~~~PgVyv~e~~~~~~~~-~~~ts~~~fvG~~~~Gp~~~p~~i~s~~d~~~~fG~~~~~~~~~~~v~~~f~ngg~~~~ 79 (659) T protein:vir:10 1 MTLLSPGIELKETTVQSTVV-NNSTGTAALAGKFQWGPAFQIKQVTNEVDLVNTFGQPTAETADYFMSAMNFLQYGNDLR 79 (659) T ss_pred CceecCceEEEEecCCceec-ccCccceEEEecccCCCCCccEEecCHHHHHHHcCCcCCCcchhHHHHHHHhhCCCeEE Confidence 999999999999975 5555 56899999999999999999999999999999999999999999999999999999999 Q ss_pred EEEccCccccccccccccccccccccccccccccceeEEeccccccccccceeeeecCCceeeEEeeccccccccccccc Q lcl|Aclame:pro 80 VVRAVDRDTAKNSSPVAGNINFTISSAGTNYRVGDKVVVKYSTDIIEPDGEVTSVDSDGKILNIFIPSGKIIAKAKEIGE 159 (660) Q Consensus 80 vvRv~~~~~~~~a~~~~~~l~~t~~~~g~~~~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~a~~~~~ 159 (660) |||+++.+..+++....+.+.++...++.....+..+.+.+..........+..++.++..................... T Consensus 80 vvRv~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~v~~vd~~~~~~~~~i~~~~~~~~~~~~g~ 159 (659) T protein:vir:10 80 VVRAVDRDTAKNSSPIAGNIEYTISTPGSNYAVGDKITVKYVSDAIETEGKITEVDTDGKIKKINIPTAKIIAKAKEVGE 159 (659) T ss_pred EEEccCcccccccccccccceeeEeecccccccccceeeeecCCCccccceeeEEecccccceeeecccccccccccccc Confidence 99999998888888888888888888887777777777777655555555555555554444444333333222222222 Q ss_pred ccccccceeeeeeccccccceeeeecccccccccccccccccccccccceeeeccccccccccccccccccccccccccc Q lcl|Aclame:pro 160 YPELGSNWTAEMSGSSSGLSAVITIDSVVMDSGILLTEVETSEEAITSLTFQESIKKYGVPGVVALYPGELGDQLEIEIV 239 (660) Q Consensus 160 ~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~g~~g~~i~v~i~ 239 (660) ..............................+...............................+.+..++.+++.+++.+. T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~a~t~~~~~~~~~~~~~~~v~a~~~G~~g~~~tv~~~ 239 (659) T protein:vir:10 160 YPTLGSNWTAEISSSSSGLAAVITLGKIITDSGILLAEIENAEAAMTAVDFQANLKKYGIPGVVALYPGELGDKIEIEIV 239 (659) T ss_pred cceeeeeeeeeeeeeccccceeeEEeeeecCCceeEEeeccccccccccccccceeecccccccccccceecccceEEEe Confidence 22222222222222222222222222233333322222222222223333333444445555667778888888888777 Q ss_pred ccccccccceeeeeeccccccccccceeeeeccccCcccceeecccCCcccceeEEeeccccccccccccchhhhhhcCC Q lcl|Aclame:pro 240 SKADYDKGASAQLKIYPDGGTRYSTAKAIFGYGPQTDDQYAIIVRRNDSVVQSVVLSTKRGERDIYGSNIFIDDFFAKGA 319 (660) Q Consensus 240 s~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~e~~~v~~~~~~~~~~~~~~~~~~~~~~g~ 319 (660) +.+.........................+.......+..+.+.+...+.+.+++.+....+.........+....+.+++ T Consensus 240 ~~a~~~~~~~v~v~~~~~~~~~a~~~t~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (659) T protein:vir:10 240 SKADYAKGASALLPIYPGGGTRASTAKAVFGYGPQTDSQYAIIVRRNDAIVQSVVLSTKRGEKDIYDSNIYIDDFFAKGG 319 (659) T ss_pred chhhccccceeeeeeeeecccccccceeeeeeccccccchhhccccccceeeeeeeeccccccccccchhhhhhhhccCc Confidence 76666555545444445555555555555555556666777777888888888888777777777777777778888888 Q ss_pred ceEEEEEecCCCcccceeeeeeccccccccccchhhhhhhhhhhhhhhcCcceeecccccCCchhhHHHHHHHHHHHHhh Q lcl|Aclame:pro 320 SNYIFATAQGWPKGFSGVIKLNGGLSSNETVEAGDLMEAWDLFADRESVNAQLFIAGSCAGESLEVASTVQKHVVAIGDS 399 (660) Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 399 (660) +.++.+.....+......+++.||.++...++..+++++++.+...+.+++++++.+....+......+|+.+|++||++ T Consensus 320 ~~~v~~~~~~~~~~~~~~~~l~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~p~~~~~~~~~~~~v~~al~~~~~~ 399 (659) T protein:vir:10 320 SEYIFATAQNWPEGFSGILTLSGGLSSNAEVTAGDLMEAWDFFADRESVDVQLFIAGSCAGESLETASTVQKHVVSIGDA 399 (659) T ss_pred ccEEEEeecccCCCccceeeecccccccccccchhHHHHHHHhhhccccceeEEEecCCCCcchhhhHHHHHHHHHHHHh Confidence 99888888777777788889999999988899999999999999999888999888888888777888999999999999 Q ss_pred ccCeEEEeccccceEEecCCCCcHHHHHHHhhhcccccccccccCcceEEEEechhcccccccccceeechHHHHHHHHH Q lcl|Aclame:pro 400 RQDCLVLCSPPRAAVVGIPVNRAVDNLVDWRTASGTYTDNNFNISSTYAAIDGNYKYQYDKYNDVNRWVPLAADIAGLCA 479 (660) Q Consensus 400 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~p~~~~~d~~~~~~~~~p~s~~~AG~~a 479 (660) +++||+++|+|+...++.+.+++.+++.+||+..+.......+++|+|+++||||++++|+.+++.+++|||+++||+|| T Consensus 400 ~~~~~~~~d~p~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~s~~~~l~~p~~~~~d~~~~~~~~~p~sg~~AGl~A 479 (659) T protein:vir:10 400 RQDCLVLCSPPRETVVGIPVTRAVDNLVNWRTAAGSYTDNNFNISSTYAAIDGNYKYQYDKYNDVNRWVPLAADIAGLCA 479 (659) T ss_pred hCCeEEEEcCccccccCCCcccCHHHHHHHHHhcccccccccccCcceEEEEeCcEEEecccCCceEEechHHHHHHHHH Confidence 99999999999999999999999999999999999988888999999999999999999999999999999999999999 Q ss_pred HhhccCCceecccceeeceeeecccccccCChhhhhhhccccceEEEEecCCeEEEecceecCCCCcccceehhhHHHHH Q lcl|Aclame:pro 480 RTDNISQPWMSPAGYNRGQILNVIKLAIETRQAQRDRLYQEAINPVTGTGGDGYVLYGDKTATSVPSPFDRINVRRLFNM 559 (660) Q Consensus 480 ~~d~~~g~~~span~~~~~v~~~~~~~~~~~~~e~~~Ln~~gin~i~~~~g~G~~~wG~rT~~~~~~~~~~i~vrR~~~~ 559 (660) |+|.+|||||||+|++++++.+++++++.+++.|++.||++|||||++|+++|+++||+||+++++++|+||||||||+| T Consensus 480 r~D~~~g~~~span~~~~~i~g~~~~~~~~~~~~~~~Ln~~gIn~i~~~~~~G~~~wG~rT~~~~~s~~~~i~vrR~~~~ 559 (659) T protein:vir:10 480 RTDNVSQTWMSPAGYNRGQILNVIKLAIETRQAQRDRLYQEAINPVTGTGGDGYVLYGDKTATSVPSPFDRINVRRLFNM 559 (659) T ss_pred HHhccCCceEccCCceeeeeeccccceecCCHhHHHHHhhCCeeEEEEeCCCeEEEEcccccCCCCcccceEehhhHHHH Confidence 99999999999999999999999999999999999999999999999999999999999999989889999999999999 Q ss_pred HHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhcCCeeeEEEEEecCCCCHHHhhCCEEEEEEEEEecCcceEEE Q lcl|Aclame:pro 560 VKTNIGSASKYRLFELNNAFTRSSFRTETSQYLQGIKALGGVYNFKVVCDTTNNTPAVIDRNEFVATFYLQPARSINYIT 639 (660) Q Consensus 560 i~~~~~~~~~~~v~epn~~~~~~~i~~~i~~~l~~l~~~gal~g~~v~~d~~~nt~~~i~~G~~~~~i~~~p~~p~e~i~ 639 (660) |+++|++.++|+||||||+.||++|+++|+.||++||++|+|+||+|+||+++||+++|++|+|+|+|+|+|++|||||+ T Consensus 560 i~~si~~~~~~~v~e~n~~~l~~~i~~~i~~fL~~l~~~gal~~~~V~~d~~~nt~~~i~~G~~~~~i~~~p~~pae~i~ 639 (659) T protein:vir:10 560 LKTNIGRSSKYRLFELNNAFTRSSFRTETAQYLQGIKALGGIYEYRVVCDTTNNTPSVIDRNEFVATFYIQPARSINYIT 639 (659) T ss_pred HHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhcCceeeEEEEEcCCCCCHHHhhCCeEEEEEEEEecCCcceEE Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred EEEEEeecCccHHHHHHhhc Q lcl|Aclame:pro 640 LNFVATATGADFDELIGAVG 659 (660) Q Consensus 640 ~~~~~~~~~~~~~e~~~~v~ 659 (660) |||+|++++++|+|++++-+ T Consensus 640 ~~~~~~~~~~~~~e~~~~~~ 659 (659) T protein:vir:10 640 LNFVATATGADFDELTGLAG 659 (659) T ss_pred EEEEEEecCcchHHhhccCC Confidence 99999999999999998866 No 6 >protein:vir:80984 Length: 666 # NCBI annotation: gp18 tail sheath protein # Family: family:all:661 # MgeID: mge:1888 # MgeName: Phi1 # Cross-refs: genbank:acc:YP_001469499;genbank:gi:157311456;genbank:GeneID:5602117 Probab=100.00 E-value=1e-162 Score=908.66 Aligned_cols=657 Identities=63% Similarity=1.090 Sum_probs=527.4 Q ss_pred CccccCceEEEEecCCcccccCCcCceeEEeecccCCCCccEEecCHHHHHHHcCCcCCcchhHHHHHHHHHhcCCEEEE Q lcl|Aclame:pro 1 MALLSPGVELKETTVQSTVVNNSTGTAALAGKFQWGPAFQIKQITDEVALVDMFGTPNTDTADYFMSAMNFLQYGNDLRV 80 (660) Q Consensus 1 ~~~~~PGVyveE~~~~~~i~gv~Ts~~afvG~~~~Gpv~~p~~i~s~~e~~~~fG~~~~~~~~~~~v~~~f~ngG~~~~v 80 (660) |+|+||||||||+|++++|+||+||++||||+|+|||+|+|++|+||.||+|.||++++.+|++|++++||+|||++||| T Consensus 1 ~~~~~Pgvyv~e~~~~~~~~~~~t~~~~~vg~~~~gp~~~p~~i~~~~~~~~~fg~~~~~~~~~~~~~~~f~~~g~~~~v 80 (666) T protein:vir:80 1 MTLLSPGFETKETTLSTTIVQSATGRAALVGKFQWGPAFQIIQVTNEVELVNKFGQPDNNTADYFMSGANFLQYGNDLRV 80 (666) T ss_pred CceecCceEEEEecCCccccccCcccceEEeccccCCCccceEecCHHHHHHhcCCccCccchHHHHHHHHhcCCCeEEE Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred EEccCccccccccccccccccccccccccccccceeEEeccccccccccceeeeecCCceeeEEeecccccccccccccc Q lcl|Aclame:pro 81 VRAVDRDTAKNSSPVAGNINFTISSAGTNYRVGDKVVVKYSTDIIEPDGEVTSVDSDGKILNIFIPSGKIIAKAKEIGEY 160 (660) Q Consensus 81 vRv~~~~~~~~a~~~~~~l~~t~~~~g~~~~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~a~~~~~~ 160 (660) ||+++.+..+++....+.+.++...++..+.+++.+.+...............+...+.......++............. T Consensus 81 ~R~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~ta~~~~~a~~~~~~ 160 (666) T protein:vir:80 81 VRVLNKEKAKNATALAGNIEFEITNEGSNYEVGDTIKIKHNRQDIETAGKVTKVDGDGKVKGVFIPTGKIIAHAKAIGVY 160 (666) T ss_pred EEecCccccccccccccceeEEEeeccccccccccccccccCcccccCcceEEEeecceeeeeecchhhhcccccccccc Confidence 99999888888888888888888888887778888888777666555555555555555555554444443333333333 Q ss_pred cccccceeeeeeccccccceeeeecccccccccccccccccccccccceeeecccccccccccccccccccccccccccc Q lcl|Aclame:pro 161 PELGSNWTAEMSGSSSGLSAVITIDSVVMDSGILLTEVETSEEAITSLTFQESIKKYGVPGVVALYPGELGDQLEIEIVS 240 (660) Q Consensus 161 ~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~g~~g~~i~v~i~s 240 (660) +.........+.....+.+....+.....+...................+.............+...+.+++.+.+.+.+ T Consensus 161 ~~v~~~~~~~~~~~~~~~~~a~~V~~~~~~~~~~~~~~~~a~~~~t~~~~~~~~~~~~~~a~~a~~~g~~g~~l~v~i~~ 240 (666) T protein:vir:80 161 PELDGDWTAEFTSSSGNGSAALSVTKIVTDSGLLLTDLETSRANITNQTFLTKLQKYDMPAVSAIYAGEIGNSLEVEILA 240 (666) T ss_pred ceeeccceeeeccccccceeeeeeeeeecCCccceeeeccccccccccccccccccccchhhhhhcccccccceeeeecc Confidence 33233333444444444444444444444433322222222223333333333444445556677788888888777655 Q ss_pred cccccccceeeeeeccccccccccceeeeeccccCcccceeecccCCcccceeEEeeccccccccccccchhhhhhcCCc Q lcl|Aclame:pro 241 KADYDKGASAQLKIYPDGGTRYSTAKAIFGYGPQTDDQYAIIVRRNDSVVQSVVLSTKRGERDIYGSNIFIDDFFAKGAS 320 (660) Q Consensus 241 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~e~~~v~~~~~~~~~~~~~~~~~~~~~~g~~ 320 (660) ......... .+........+ .............+.++.+++..++.+.|++.++...+.+...+...+...++.++.+ T Consensus 241 ~~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~v~~~g~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (666) T protein:vir:80 241 RSAFKNTAP-DLTMYPYGGER-TAARNLIPYAPQNDNQYAFIVRRDGVVVESYVLSTLKGDKDVYGNSIYMDDFFGRGSS 318 (666) T ss_pred ccccccccc-cceeeeccccc-cccceeeeeccccccceeeEeccCCccceeeecccccccccccchhhhhhhhhccccc Confidence 443332211 11111121111 1122233344556667788888899999999998888888777777777888888888 Q ss_pred eEEEEEecCCCcccceeeeeecccccccccc----chh----hhhhhhhhhhhhhcCcceeecccccCCchhhHHHHHHH Q lcl|Aclame:pro 321 NYIFATAQGWPKGFSGVIKLNGGLSSNETVE----AGD----LMEAWDLFADRESVNAQLFIAGSCAGESLEVASTVQKH 392 (660) Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~gg~~~~~~~~----~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 392 (660) .++...........+....+.+|.+...... ..+ ..+...++...+.++..+++.+....+. ....+++.+ T Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~p~~~~~~-~~~~~v~~~ 397 (666) T protein:vir:80 319 QYIYATAQGWVDGFSGIISLAGGVSANEATTGGVGADPFIGAMMQGWGLFAERESIHVNLLIAGACAGEG-DAFSTVQKH 397 (666) T ss_pred eeeeecccccccccceEEEecCCCCcccccccccccccccccchhhhhhhhhhcccccceEeecCcCCcc-cchHHHHHH Confidence 8777777766666677778888776543321 122 2234445555666666777666655543 356789999 Q ss_pred HHHHHhhccCeEEEeccccceEEecCCCCcHHHHHHHhhhcccccccccccCcceEEEEechhcccccccccceeechHH Q lcl|Aclame:pro 393 VVAIGDSRQDCLVLCSPPRAAVVGIPVNRAVDNLVDWRTASGTYTDNNFNISSTYAAIDGNYKYQYDKYNDVNRWVPLAA 472 (660) Q Consensus 393 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~p~~~~~d~~~~~~~~~p~s~ 472 (660) |++||+++++||+++|+|+.+++|.+++++++++++||+..+.......+++|+|+++||||++++|+.+++.+++|||+ T Consensus 398 ~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~p~~~~~d~~~~~~~~~p~sg 477 (666) T protein:vir:80 398 AVSIGDERQDCLVMVSPPRSTVVNIPVTTAIDNLIAWREGSGNYNENNMNINTTYAVIDGNYKYQYDKYNDVNRWVPLAA 477 (666) T ss_pred HHHHHHhhcceEEEeecceeEEeecCCCCCHHHHHHHHHhcccchhhhcccCcceEEEEcCceEEecccCCceeEechHH Confidence 99999999999999999999999999999999999999999998888889999999999999999999999999999999 Q ss_pred HHHHHHHHhhccCCceecccceeeceeeecccccccCChhhhhhhccccceEEEEecCCeEEEecceecCCCCcccceeh Q lcl|Aclame:pro 473 DIAGLCARTDNISQPWMSPAGYNRGQILNVIKLAIETRQAQRDRLYQEAINPVTGTGGDGYVLYGDKTATSVPSPFDRIN 552 (660) Q Consensus 473 ~~AG~~a~~d~~~g~~~span~~~~~v~~~~~~~~~~~~~e~~~Ln~~gin~i~~~~g~G~~~wG~rT~~~~~~~~~~i~ 552 (660) ++||+|||+|.++||||||+|+++.++.+++++++.+++.|++.||++||||||+|+++|+++||+||++++|++|+||| T Consensus 478 ~~AGl~Ar~D~~~g~~~sPan~~~~~i~g~~~~~~~~~~~~~~~Ln~~gIn~i~~~~g~G~~~wG~rT~~~~~s~~~~i~ 557 (666) T protein:vir:80 478 DIAGLCARTDAVSQPWMSPAGYNRGQIMNVVKLAIEPRKAHRDRLYQAAINPVIGAGGEGFILMGDKTATTVPSPFDRIN 557 (666) T ss_pred HHHHHHHHHhhcCCceEccCCeecceeeccccceeecChhHHHhhhhCCeeEEEEeCCCeEEEEccccCCCCCcccceee Confidence 99999999999999999999999999999999999999999999999999999999999999999999999989999999 Q ss_pred hhHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhcCCeeeEEEEEecCCCCHHHhhCCEEEEEEEEEec Q lcl|Aclame:pro 553 VRRLFNMVKTNIGSASKYRLFELNNAFTRSSFRTETSQYLQGIKALGGVYNFKVVCDTTNNTPAVIDRNEFVATFYLQPA 632 (660) Q Consensus 553 vrR~~~~i~~~~~~~~~~~v~epn~~~~~~~i~~~i~~~l~~l~~~gal~g~~v~~d~~~nt~~~i~~G~~~~~i~~~p~ 632 (660) |||||+||+++|++.++|+||||||+.||++|+++|++||++||++|+|.||+|+||+++||++||++|+|+|+|+++|+ T Consensus 558 vRRl~~~i~~si~~~~~~~v~epn~~~l~~~i~~~i~~~L~~l~~~gal~g~~V~~d~~~nt~~di~~G~~~~~i~~~P~ 637 (666) T protein:vir:80 558 VRRLFNMLKKNIGDSSKYKLFENNDNFTRASFRMEVSQYLSTIRSLGGIYDFRVQCDTTNNTPDVIDRNEFVASMFIKPA 637 (666) T ss_pred hhhHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhcCceeeeEEEEcCCCCCHHHhhCCeEEEEEEEEec Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred CcceEEEEEEEEeecCccHHHHHHhhcC Q lcl|Aclame:pro 633 RSINYITLNFVATATGADFDELIGAVGG 660 (660) Q Consensus 633 ~p~e~i~~~~~~~~~~~~~~e~~~~v~~ 660 (660) +|||||+|||+|+++|++|+|++++|+= T Consensus 638 ~Pae~I~~~~~~~~~~~~~~e~~~~~~~ 665 (666) T protein:vir:80 638 KSINYIMLNFTAVATGSDFDEIIGPVNQ 665 (666) T ss_pred CCcceEEEEEEEeecCccHHHHHHHHhc Confidence 9999999999999999999999999999 No 7 >protein:vir:7206 Length: 659 # NCBI annotation: gp18 tail sheath protein # Family: family:all:661 # MgeID: mge:142 # MgeName: T4 # Cross-refs: genbank:acc:NP_049780;genbank:gi:9632592;genbank:GeneID:1258597 Probab=100.00 E-value=6.4e-162 Score=904.30 Aligned_cols=659 Identities=83% Similarity=1.285 Sum_probs=533.8 Q ss_pred CccccCceEEEEecCCcccccCCcCceeEEeecccCCCCccEEecCHHHHHHHcCCcCCcchhHHHHHHHHHhcCCEEEE Q lcl|Aclame:pro 1 MALLSPGVELKETTVQSTVVNNSTGTAALAGKFQWGPAFQIKQITDEVALVDMFGTPNTDTADYFMSAMNFLQYGNDLRV 80 (660) Q Consensus 1 ~~~~~PGVyveE~~~~~~i~gv~Ts~~afvG~~~~Gpv~~p~~i~s~~e~~~~fG~~~~~~~~~~~v~~~f~ngG~~~~v 80 (660) |+|+||||||||++....+.+++|||+||||+|+|||+|+|++|+||.||+|+||+++..+|++|++++||+|||++||| T Consensus 1 ~~~~~PgVyvee~~~~~~~~~~~ts~~~fvG~~~~Gp~~~p~~i~s~~~~~~~fG~~~~~~~~~~~~~~~f~ngg~~~~v 80 (659) T protein:vir:72 1 MTLLSPGIELKETTVQSTVVNNSTGTAALAGKFQWGPAFQIKQVTNEVDLVNTFGQPTAETADYFMSAMNFLQYGNDLRV 80 (659) T ss_pred CceecCceEEEEecCCcccccCCCcceEEEeecCCCCCcccEEecCHHHHHHHcCCcCCCCchhHHHHHHHHhCCceEEE Confidence 99999999999997544555669999999999999999999999999999999999999999999999999999999999 Q ss_pred EEccCccccccccccccccccccccccccccccceeEEeccccccccccceeeeecCCceeeEEeecccccccccccccc Q lcl|Aclame:pro 81 VRAVDRDTAKNSSPVAGNINFTISSAGTNYRVGDKVVVKYSTDIIEPDGEVTSVDSDGKILNIFIPSGKIIAKAKEIGEY 160 (660) Q Consensus 81 vRv~~~~~~~~a~~~~~~l~~t~~~~g~~~~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~a~~~~~~ 160 (660) |||++.+..+++......+..+...++..+..+.....++..........+...+.++.......++............. T Consensus 81 vRv~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~v~~~~~~~~~~~~~v~t~~~~a~~~~~~~~ 160 (659) T protein:vir:72 81 VRAVDRDTAKNSSPIAGNIDYTISTPGSNYAVGDKITVKYVSDDIETEGKITEVDADGKIKKINIPTGKNYAKAKEVGEY 160 (659) T ss_pred EEccCCcccccccccccccceeecccccccccceeeeeeeccccccccceEEEeeccccceeeeeccccccccccccccc Confidence 99999888877777777777777777766666666666665544444445554444443333333322222222221122 Q ss_pred cccccceeeeeeccccccceeeeecccccccccccccccccccccccceeeecccccccccccccccccccccccccccc Q lcl|Aclame:pro 161 PELGSNWTAEMSGSSSGLSAVITIDSVVMDSGILLTEVETSEEAITSLTFQESIKKYGVPGVVALYPGELGDQLEIEIVS 240 (660) Q Consensus 161 ~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~g~~g~~i~v~i~s 240 (660) ..........+..................+...............................+.+..++.+++.+.+.+.+ T Consensus 161 ~~~~~~~~~~~~~~~~~~a~~~~~v~v~~~~~~~~~~v~~~~~a~~~~~~~~~v~~~~~~~~~a~~~gt~g~~~tv~i~~ 240 (659) T protein:vir:72 161 PTLGSNWTAEISSSSSGLAAVITLGKIITDSGILLAEIENAEAAMTAVDFQANLKKYGIPGVVALYPGELGDKIEIEIVS 240 (659) T ss_pred cccccceeeEEeeccccccceEEEEEeecCcceeeeeccccchhhhcccccccccccccceeeeccccccccceeEEEcc Confidence 21111222222222222222222222233332222222222222233333333333444555666777888888777776 Q ss_pred cccccccceeeeeeccccccccccceeeeeccccCcccceeecccCCcccceeEEeeccccccccccccchhhhhhcCCc Q lcl|Aclame:pro 241 KADYDKGASAQLKIYPDGGTRYSTAKAIFGYGPQTDDQYAIIVRRNDSVVQSVVLSTKRGERDIYGSNIFIDDFFAKGAS 320 (660) Q Consensus 241 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~e~~~v~~~~~~~~~~~~~~~~~~~~~~g~~ 320 (660) ...........................+........+.+.+.+...+...+.+.+....+.........+....+.++++ T Consensus 241 ~~~~~~~~~~~v~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (659) T protein:vir:72 241 KADYAKGASALLPIYPGGGTRASTAKAVFGYGPQTDSQYAIIVRRNDAIVQSVVLSTKRGEKDIYDSNIYIDDFFAKGGS 320 (659) T ss_pred ccccccceeeeeecccccccccccceeeeeeecccccccceeeecccceeeeeeeeeccccccccchhhhhhhhhhcCCc Confidence 66555544444444445555555555556666666677777777788888888888777777777777777888888999 Q ss_pred eEEEEEecCCCcccceeeeeeccccccccccchhhhhhhhhhhhhhhcCcceeecccccCCchhhHHHHHHHHHHHHhhc Q lcl|Aclame:pro 321 NYIFATAQGWPKGFSGVIKLNGGLSSNETVEAGDLMEAWDLFADRESVNAQLFIAGSCAGESLEVASTVQKHVVAIGDSR 400 (660) Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 400 (660) .++.+.....+......+++.||.++...++..+++++++.+...+.+++.++++++......+...+++.+|++||+++ T Consensus 321 ~~v~~~~~~~~~~~~~~~~l~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~p~~~~~~~~~~~~v~~~l~~~~~~~ 400 (659) T protein:vir:72 321 EYIFATAQNWPEGFSGILTLSGGLSSNAEVTAGDLMEAWDFFADRESVDVQLFIAGSCAGESLETASTVQKHVVSIGDAR 400 (659) T ss_pred eEEEEEecccCCcccccccccccccccccccchhHHHHHHHhhhccccceeEEEecCCCCcchhhhHHHHHHHHHHHhhh Confidence 99888888888888888899999999888899999999999999998888898888887777777889999999999999 Q ss_pred cCeEEEeccccceEEecCCCCcHHHHHHHhhhcccccccccccCcceEEEEechhcccccccccceeechHHHHHHHHHH Q lcl|Aclame:pro 401 QDCLVLCSPPRAAVVGIPVNRAVDNLVDWRTASGTYTDNNFNISSTYAAIDGNYKYQYDKYNDVNRWVPLAADIAGLCAR 480 (660) Q Consensus 401 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~p~~~~~d~~~~~~~~~p~s~~~AG~~a~ 480 (660) ++||+++|+|+..+++.+.+.+.+++++||+..+.......+++|+|+++||||++++|+.+++.+++|||+++||+||| T Consensus 401 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~s~~~~~~~p~~~~~d~~~~~~~~~p~sg~vAGl~Ar 480 (659) T protein:vir:72 401 QDCLVLCSPPRETVVGIPVTRAVDNLVNWRTAAGSYTDNNFNISSTYAAIDGNHKYQYDKYNDVNRWVPLAADIAGLCAR 480 (659) T ss_pred CCEEEEEcCccccccCCCcccCHHHHHHHHhhccccccccccccceeEEEEcCceeeccccCCceEEechHHHHHHHHHH Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred hhccCCceecccceeeceeeecccccccCChhhhhhhccccceEEEEecCCeEEEecceecCCCCcccceehhhHHHHHH Q lcl|Aclame:pro 481 TDNISQPWMSPAGYNRGQILNVIKLAIETRQAQRDRLYQEAINPVTGTGGDGYVLYGDKTATSVPSPFDRINVRRLFNMV 560 (660) Q Consensus 481 ~d~~~g~~~span~~~~~v~~~~~~~~~~~~~e~~~Ln~~gin~i~~~~g~G~~~wG~rT~~~~~~~~~~i~vrR~~~~i 560 (660) +|.++||||||+|++++++.+++++++.+++.|++.||++||||||+|+++|+++||+||++++|++|+||||||||+|| T Consensus 481 ~D~~~G~~~span~~~~~i~g~~~~~~~~~~~~~~~Ln~~gIn~i~~~~g~G~~~wG~rT~~~~~s~~~~i~vrR~~~~i 560 (659) T protein:vir:72 481 TDNVSQTWMSPAGYNRGQILNVIKLAIETRQAQRDRLYQEAINPVTGTGGDGYVLYGDKTATSVPSPFDRINVRRLFNML 560 (659) T ss_pred hhccCCcEEccCCeeeceeeccccccccCChhHHHHHhhCCceEEEEecCCeEEEEcccccCCCCcccceEeehhHHHHH Confidence 99999999999999999999999999999999999999999999999999999999999999998899999999999999 Q ss_pred HHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhcCCeeeEEEEEecCCCCHHHhhCCEEEEEEEEEecCcceEEEE Q lcl|Aclame:pro 561 KTNIGSASKYRLFELNNAFTRSSFRTETSQYLQGIKALGGVYNFKVVCDTTNNTPAVIDRNEFVATFYLQPARSINYITL 640 (660) Q Consensus 561 ~~~~~~~~~~~v~epn~~~~~~~i~~~i~~~l~~l~~~gal~g~~v~~d~~~nt~~~i~~G~~~~~i~~~p~~p~e~i~~ 640 (660) +++|++.++|+||||||+.||++|+++|++||++||++|+|.||+|+||+++||++||++|+|+|+|+|+|++|||||+| T Consensus 561 ~~si~~~~~~~v~e~n~~~l~~~i~~~i~~fL~~l~~~gal~~~~V~~d~~~nt~~~i~~G~~~~~i~~~p~~pae~I~~ 640 (659) T protein:vir:72 561 KTNIGRSSKYRLFELNNAFTRSSFRTETAQYLQGNKALGGIYEYRVVCDTTNNTPSVIDRNEFVATFYIQPARSINYITL 640 (659) T ss_pred HHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCceeeEEEEEcCCCCCHHHhhCCeEEEEEEEEecCCccEEEE Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred EEEEeecCccHHHHHHhhc Q lcl|Aclame:pro 641 NFVATATGADFDELIGAVG 659 (660) Q Consensus 641 ~~~~~~~~~~~~e~~~~v~ 659 (660) ||+|++++++|+|+++.-. T Consensus 641 ~~~~~~~~~~~~e~~~~~~ 659 (659) T protein:vir:72 641 NFVATATGADFDELTGLAG 659 (659) T ss_pred EEEEeecCcchHHhcccCC Confidence 9999999999999998866 No 8 >protein:vir:6594 Length: 666 # NCBI annotation: tail sheath protein # Family: family:all:661 # MgeID: mge:139 # MgeName: RB49 # Cross-refs: genbank:acc:NP_891725;genbank:gi:33620670;genbank:GeneID:1725344 Probab=100.00 E-value=5.1e-162 Score=904.83 Aligned_cols=657 Identities=63% Similarity=1.093 Sum_probs=518.1 Q ss_pred CccccCceEEEEecCCcccccCCcCceeEEeecccCCCCccEEecCHHHHHHHcCCcCCcchhHHHHHHHHHhcCCEEEE Q lcl|Aclame:pro 1 MALLSPGVELKETTVQSTVVNNSTGTAALAGKFQWGPAFQIKQITDEVALVDMFGTPNTDTADYFMSAMNFLQYGNDLRV 80 (660) Q Consensus 1 ~~~~~PGVyveE~~~~~~i~gv~Ts~~afvG~~~~Gpv~~p~~i~s~~e~~~~fG~~~~~~~~~~~v~~~f~ngG~~~~v 80 (660) |+||||||||||+|++++|+||+||++||||+|+|||+|+|++|+||.||+|+||++++.+|++|++++||+|||++||| T Consensus 1 ~~~~~PgVyv~e~~~~~~i~~v~ts~~~fvG~~~~Gp~~~p~~v~s~~~~~~~fG~~~~~~~~~~~~~~~f~ngg~~~~v 80 (666) T protein:vir:65 1 MTLLSPGFETKETTLSTTIVQSETGRAALVGKFQWGPAFQIIQVTNEVELVNKFGQPDNNTADYFMSGANFLQYGNDLRV 80 (666) T ss_pred CceecCceEEEEecCcccccccCcccceEEecccCCCCccCEEecCHHHHHHHcCCccccchhHHHHHHHHHhcCceEEE Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred EEccCccccccccccccccccccccccccccccceeEEeccccccccccceeeeecCCceeeEEeecccccccccccccc Q lcl|Aclame:pro 81 VRAVDRDTAKNSSPVAGNINFTISSAGTNYRVGDKVVVKYSTDIIEPDGEVTSVDSDGKILNIFIPSGKIIAKAKEIGEY 160 (660) Q Consensus 81 vRv~~~~~~~~a~~~~~~l~~t~~~~g~~~~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~a~~~~~~ 160 (660) ||+++.+..+++....+.+..+...++....+++.+.+............+......+.....+.++............. T Consensus 81 vrv~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~V~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~~~~~~~~g~~ 160 (666) T protein:vir:65 81 VRVLNKEKAKNATALAGNVEFEITNEGSNYEVGDTIKIKHNRQDIETAGKVTKVDGDGKVKGVFIPTGKIIAHAKAIGVY 160 (666) T ss_pred EEccCcccccccccccCceeeeEeeccccccccceEEEEecccccccccccccccccccccccccccceeeccccccCcc Confidence 99999888888887777777777778877778999888877665444444444444444444433333332222222222 Q ss_pred cccccceeeeeeccccccceeeeecccccccccccccccccccccccceeeecccccccccccccccccccccccccccc Q lcl|Aclame:pro 161 PELGSNWTAEMSGSSSGLSAVITIDSVVMDSGILLTEVETSEEAITSLTFQESIKKYGVPGVVALYPGELGDQLEIEIVS 240 (660) Q Consensus 161 ~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~g~~g~~i~v~i~s 240 (660) ...............+.......+.....++..................+.............+...+.+++.+++.+.. T Consensus 161 ~~l~~~~~~~~~~~~~~~~~a~sv~~~~~~g~~~~~~~~~a~~~~~~~~~~~~~~~~~~~a~~A~~~g~~g~~i~v~i~~ 240 (666) T protein:vir:65 161 PELDGGWTAEFTSSSGNGSAALSVTKIVTDSGLLLTDLETSRANITNQTFLTKLKKYDMPAVSAIYAGEIGNSLEVEILA 240 (666) T ss_pred eeEeeccceeecccCcccccceeeeecccccceeeeeecccccccccccccccccccccceeeeeeccccccceeEEeec Confidence 22222222233333333333333333333333332222222222222233333333444556677788888877776655 Q ss_pred cccccccceeeeeeccccccccccceeeeeccccCcccceeecccCCcccceeEEeeccccccccccccchhhhhhcCCc Q lcl|Aclame:pro 241 KADYDKGASAQLKIYPDGGTRYSTAKAIFGYGPQTDDQYAIIVRRNDSVVQSVVLSTKRGERDIYGSNIFIDDFFAKGAS 320 (660) Q Consensus 241 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~e~~~v~~~~~~~~~~~~~~~~~~~~~~g~~ 320 (660) .......... +......... .............+..+.+.+..++...|+|.++...+.+...+...+...+..++.+ T Consensus 241 ~~~~~~~~~~-l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~v~~~g~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (666) T protein:vir:65 241 RSAFKNTAPD-LTMYPYGGER-TAARNLIPYAPQNDNQYAFIVRRDGVVVESYVLSTLKGDKDVYGNSIYMDDFFARGSS 318 (666) T ss_pred cccccccccc-cccccccccc-ccceeeecccccccccceeeeecCCcccceeecccCcccccccchhhhhhhhhccccc Confidence 4433322111 1111111111 1222233334455667788888899999999988888888777777777777778888 Q ss_pred eEEEEEecCCCcccceeeeeeccccccccccc--------hhhhhhhhhhhhhhhcCcceeecccccCCchhhHHHHHHH Q lcl|Aclame:pro 321 NYIFATAQGWPKGFSGVIKLNGGLSSNETVEA--------GDLMEAWDLFADRESVNAQLFIAGSCAGESLEVASTVQKH 392 (660) Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~gg~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 392 (660) .++..............+++.+|.+.....+. .+..++++.+...+.+.+.+++.+....+. .+..+|+.+ T Consensus 319 ~~v~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~p~~~~~~-~~~~~v~~~ 397 (666) T protein:vir:65 319 QYIYATAQGWVDGFSGIISLAGGVSANEATTGGVGADPFIGAMMQGWDLFAERESIHVNLLIAGACAGEG-DAFSTVQKH 397 (666) T ss_pred ceeeeecccccccccceEEccCCCCcCcccccccccccccccHHHHHHHHhhhhhccCCceeecCcCCcc-chhHHHHHH Confidence 87777666655556667778888776543221 223445566666666666666666554433 456789999 Q ss_pred HHHHHhhccCeEEEeccccceEEecCCCCcHHHHHHHhhhcccccccccccCcceEEEEechhcccccccccceeechHH Q lcl|Aclame:pro 393 VVAIGDSRQDCLVLCSPPRAAVVGIPVNRAVDNLVDWRTASGTYTDNNFNISSTYAAIDGNYKYQYDKYNDVNRWVPLAA 472 (660) Q Consensus 393 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~p~~~~~d~~~~~~~~~p~s~ 472 (660) |++||+++++||+++|+|+..++|.+++++++++++||+..+.......+++|+|+++||||++++|+.++..+++|||+ T Consensus 398 l~~~~~~~~~~~a~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~p~~~~~d~~~~~~~~~p~sg 477 (666) T protein:vir:65 398 AVSIGDERQDCLVMVSPPRSTVVNIPVTTAIDNLIAWREGSGNYNENNMNINTTYAVIDGNYKYQYDKYNDVNRWVPLAA 477 (666) T ss_pred HHHHHhhccceEEEeccccceeeecCCCCCHHHHHHHHHhcccccccccccCcceEEEEcCceEEecccCCceeEechHH Confidence 99999999999999999999999999999999999999999998888889999999999999999999999999999999 Q ss_pred HHHHHHHHhhccCCceecccceeeceeeecccccccCChhhhhhhccccceEEEEecCCeEEEecceecCCCCcccceeh Q lcl|Aclame:pro 473 DIAGLCARTDNISQPWMSPAGYNRGQILNVIKLAIETRQAQRDRLYQEAINPVTGTGGDGYVLYGDKTATSVPSPFDRIN 552 (660) Q Consensus 473 ~~AG~~a~~d~~~g~~~span~~~~~v~~~~~~~~~~~~~e~~~Ln~~gin~i~~~~g~G~~~wG~rT~~~~~~~~~~i~ 552 (660) ++||+|||+|.++||||||+|+++.+|.+++++++.+++.|++.||++|||||++|+++|+++||+||++++|++|+||| T Consensus 478 ~vAGl~Ar~D~~~g~~~span~~~~~i~g~~~~~~~~~~~~~~~Ln~~gIn~i~~~~~~G~~~wG~rT~~~~~s~~~~i~ 557 (666) T protein:vir:65 478 DIAGLCARTDAVSQPWMSPAGYNRGQIMNVVKLAIEPRKAHRDRLYQAAINPVIGAGGEGFILMGDKTATTVPSPFDRIN 557 (666) T ss_pred HHHHHHHHHhccCCcEEccCCeecceeeccccceeecChhHHHhhhhCCceEEEEeCCCeEEEEecccCCCCCcccceEe Confidence 99999999999999999999999999999999999999999999999999999999999999999999999988999999 Q ss_pred hhHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhcCCeeeEEEEEecCCCCHHHhhCCEEEEEEEEEec Q lcl|Aclame:pro 553 VRRLFNMVKTNIGSASKYRLFELNNAFTRSSFRTETSQYLQGIKALGGVYNFKVVCDTTNNTPAVIDRNEFVATFYLQPA 632 (660) Q Consensus 553 vrR~~~~i~~~~~~~~~~~v~epn~~~~~~~i~~~i~~~l~~l~~~gal~g~~v~~d~~~nt~~~i~~G~~~~~i~~~p~ 632 (660) |||||+||+++|++.++|+||||||+.||++|+++|+.||++||++|+|.||+|+||+++||+++|++|+|+++|+|+|+ T Consensus 558 vrR~~~~i~~si~~~~~~~v~epn~~~l~~~i~~~i~~~L~~l~~~gal~g~~V~~d~~~nt~~~i~~G~~~~~i~~~p~ 637 (666) T protein:vir:65 558 VRRLFNMLKKNIGDSSKYKLFENNDNFTRASFRMEVSQYLSTIRSLGGIYDFRVQCDTTNNTPDVIDRNEFVASMFIKPA 637 (666) T ss_pred hhhHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeEEEEcCCCCCHHHhhCCeEEEEEEEEec Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred CcceEEEEEEEEeecCccHHHHHHhhcC Q lcl|Aclame:pro 633 RSINYITLNFVATATGADFDELIGAVGG 660 (660) Q Consensus 633 ~p~e~i~~~~~~~~~~~~~~e~~~~v~~ 660 (660) +|||||+|||+|++++++|+|++++|+= T Consensus 638 ~pae~i~~~~~~~~~~~~~~e~~~~~~~ 665 (666) T protein:vir:65 638 KSINYIMLNFTAVATGSDFDEIIGPANQ 665 (666) T ss_pred CCcceEEEEEEEeecCccHHHHHHHHhc Confidence 9999999999999999999999999999 No 9 >protein:vir:100539 Length: 663 # NCBI annotation: gp18 tail sheath monomer # Family: family:all:661 # MgeID: mge:1488 # MgeName: 25 # Cross-refs: genbank:acc:YP_656380;genbank:gi:109290131;genbank:GeneID:4156517 Probab=100.00 E-value=1.3e-161 Score=902.62 Aligned_cols=658 Identities=60% Similarity=1.049 Sum_probs=552.5 Q ss_pred CccccCceEEEEecCCcccccCCcCceeEEeecccCCCCccEEecCHHHHHHHcCCcCCcchhHHHHHHHHHhcCCEEEE Q lcl|Aclame:pro 1 MALLSPGVELKETTVQSTVVNNSTGTAALAGKFQWGPAFQIKQITDEVALVDMFGTPNTDTADYFMSAMNFLQYGNDLRV 80 (660) Q Consensus 1 ~~~~~PGVyveE~~~~~~i~gv~Ts~~afvG~~~~Gpv~~p~~i~s~~e~~~~fG~~~~~~~~~~~v~~~f~ngG~~~~v 80 (660) |+|+||||||||+|++++|+||+||++||||+|+|||+|+|++|+||.||+|.||++++.+|++|+|++||+|||++||| T Consensus 1 ~~~~~Pgvyv~e~~~~~~~~~v~t~~~~fvG~~~~gp~~~p~~i~s~~~~~~~fG~~~~~~~~~~~v~~~f~ngg~~~~v 80 (663) T protein:vir:10 1 MALLSPGIEMKETSINSTVVRSATGRAALVGKFAWGPAYEIRQVTNEVELVDMFGSPDNVTAPYFMSAMNFLQYGNDLRL 80 (663) T ss_pred CccccCceEEEEecCcccccccccccceeeeccccCCCCcCEEecCHHHHHHHcCCcccccchHHHHHHHHHhCCCeEEE Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred EEccCccccccccccccccccccccccccccccceeEEeccccccccccceeeeecCCceeeEEeecccccccccccccc Q lcl|Aclame:pro 81 VRAVDRDTAKNSSPVAGNINFTISSAGTNYRVGDKVVVKYSTDIIEPDGEVTSVDSDGKILNIFIPSGKIIAKAKEIGEY 160 (660) Q Consensus 81 vRv~~~~~~~~a~~~~~~l~~t~~~~g~~~~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~a~~~~~~ 160 (660) |||.+++..+++.+..+...++..++++...+++.+.+............+......+.....+.+.............. T Consensus 81 vRv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~~~~~g~~~~~~~~~a~~~~~a~~~~~~ 160 (663) T protein:vir:10 81 VRVIDMEQAKNASPLFNQIEVTITTEGQGYTVGDTVSIKHNTTTVTEEGKVTKVDADGKIKALFVPSSAVIAKAKQLGTY 160 (663) T ss_pred EecCCcccccccccccccceeeEeecccCccccceeeecccccccccCcceeeeccCCceeEEEeccccccccccccccc Confidence 99999888888888777777777788888889999988877766655555556655555556555554433333333344 Q ss_pred cccccceeeeeeccccccceeeeecccccccccccccccccccccccceeeecccccccccccccccccccccccccccc Q lcl|Aclame:pro 161 PELGSNWTAEMSGSSSGLSAVITIDSVVMDSGILLTEVETSEEAITSLTFQESIKKYGVPGVVALYPGELGDQLEIEIVS 240 (660) Q Consensus 161 ~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~g~~g~~i~v~i~s 240 (660) +..+......+............+.+...+....+........................+...+..++.+++.+.+.+.+ T Consensus 161 ~~~~~a~~~~v~~~~~~~~~a~av~~i~~dg~vt~~~~~~a~~~~~~~~~~~~~~~~~~~~~~a~~~g~~G~~i~v~~~~ 240 (663) T protein:vir:10 161 PVLGDNWRAEVSGASGGSAATLTLGGIVVDSGVTFGNSEEAPDVMTSTKVLANFAKYGMPLISAVYPGEIGSTVEVEVIS 240 (663) T ss_pred cccccceeeEEeeccccccccceeEeeecCCceeEEeeeccccccccceeeeeccccccceeeeecccccCcceeEeecc Confidence 44444555555444444444444444444444444443333333344444444445566677788889999988887766 Q ss_pred cccccccceeeeeeccccccccccceeeeeccccCcccceeecccCCcccceeEEeeccccccccccccchhhhhhcCCc Q lcl|Aclame:pro 241 KADYDKGASAQLKIYPDGGTRYSTAKAIFGYGPQTDDQYAIIVRRNDSVVQSVVLSTKRGERDIYGSNIFIDDFFAKGAS 320 (660) Q Consensus 241 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~e~~~v~~~~~~~~~~~~~~~~~~~~~~g~~ 320 (660) ......... ..+....+.+......+...+...++.+.+++..++...+++.++..++.+...+...++..+..++.+ T Consensus 241 ~~~~~~~~~--~~v~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~e~~~ls~~~~~~~~~~~~~~~~~~~~~~~s 318 (663) T protein:vir:10 241 KTAFQSGAA--QPIYPFGGTRASNARSVIQYGPMTDDQFAIIVRRDGIVVESTVLSTRRGDRDVYGNNIFMDDYFRNGSS 318 (663) T ss_pred cccccccce--eeecccCcccccccccccccccccchhhcccccCCCcccceeeeeccccccccchhhhhhhhhhcCccc Confidence 554443322 223444455555555555667777788888888899999999999888888777777777778888888 Q ss_pred eEEEEEecCCCcccceeeeeeccccccccccchhhhhhhhhhhhhhhcCcceeecccccCCchhhHHHHHHHHHHHHhhc Q lcl|Aclame:pro 321 NYIFATAQGWPKGFSGVIKLNGGLSSNETVEAGDLMEAWDLFADRESVNAQLFIAGSCAGESLEVASTVQKHVVAIGDSR 400 (660) Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 400 (660) .++.......+......+++.+|.+++..++..+++++++++...+.++..++++++...+..++..+|+.+|+.||+++ T Consensus 319 ~~v~~~~~~~~~~~~~~~~l~gg~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~i~~~~~~~~~~~~~~v~~~l~~~~~~~ 398 (663) T protein:vir:10 319 NFIYASSVNWPAGFTGIIQLGGGASANNAVGSDELIAGWDLFADREALHVNLMIAGACKSDGVAVASTVQKHVVALADDR 398 (663) T ss_pred ceeEeeccccCcccceeEEecccccCcccchhhhhhhHHhhhccccccCceEEEeecCCCCchhhHHHHHHHHHHHHHhh Confidence 88877777777777778899999999999999999999999999998888888998888898888999999999999999 Q ss_pred cCeEEEeccccceEEecCCCCcHHHHHHHhhhcccc---cccccccCcceEEEEechhcccccccccceeechHHHHHHH Q lcl|Aclame:pro 401 QDCLVLCSPPRAAVVGIPVNRAVDNLVDWRTASGTY---TDNNFNISSTYAAIDGNYKYQYDKYNDVNRWVPLAADIAGL 477 (660) Q Consensus 401 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~s~~~~~~~p~~~~~d~~~~~~~~~p~s~~~AG~ 477 (660) ++||+++|+|+............+++.+||+..... .....+++|+|+++||||++++|+.++..+++|||+++||+ T Consensus 399 ~~~~ai~d~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~p~~~~~d~~~~~~~~~p~s~~vAGl 478 (663) T protein:vir:10 399 QDCVAFVNPPSELLVGVPTTQAVKNIVEWRNGVTTGGEVVDNNMNISSTYAFISGNYKYQYDKYNDINRWVPLSADIAGL 478 (663) T ss_pred CCEEEEEecCcccccccchhhhHHHHHHHhhhccccchhhhhhcccCcceEEEEecceeEecccCCceEEechHHHHHHH Confidence 999999999988777777778889999999865332 22334689999999999999999999999999999999999 Q ss_pred HHHhhccCCceecccceeeceeeecccccccCChhhhhhhccccceEEEEecC-CeEEEecceecCCCCcccceehhhHH Q lcl|Aclame:pro 478 CARTDNISQPWMSPAGYNRGQILNVIKLAIETRQAQRDRLYQEAINPVTGTGG-DGYVLYGDKTATSVPSPFDRINVRRL 556 (660) Q Consensus 478 ~a~~d~~~g~~~span~~~~~v~~~~~~~~~~~~~e~~~Ln~~gin~i~~~~g-~G~~~wG~rT~~~~~~~~~~i~vrR~ 556 (660) |||+|.++||||||+|+++.+|.+++++++.+++.|++.||++|||+|+.|++ +|+++||+||++++|++|+||||||| T Consensus 479 ~Ar~D~~~g~~~span~~~~~i~g~~~~~~~~~~~~~~~Ln~~gin~i~~~~~~~G~~~wG~rT~s~~~s~~~~i~vrR~ 558 (663) T protein:vir:10 479 CAYTDQVGHPWMSPAGYRRGQLRNTIKLAIEPKQSLRDTMYQVSINPVTGFAGGDGFVLFGDKMATQVPSPFDRINVRRL 558 (663) T ss_pred HHHhhccCCcEEccCCeeecceeccccceeecCchhHHHHHhCCCcEEEEeeCCCcEEEEcccccCCCCcccceEehhhH Confidence 99999999999999999999999999999999999999999999999999997 79999999999999889999999999 Q ss_pred HHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhcCCeeeEEEEEecCCCCHHHhhCCEEEEEEEEEecCcce Q lcl|Aclame:pro 557 FNMVKTNIGSASKYRLFELNNAFTRSSFRTETSQYLQGIKALGGVYNFKVVCDTTNNTPAVIDRNEFVATFYLQPARSIN 636 (660) Q Consensus 557 ~~~i~~~~~~~~~~~v~epn~~~~~~~i~~~i~~~l~~l~~~gal~g~~v~~d~~~nt~~~i~~G~~~~~i~~~p~~p~e 636 (660) |+||+++|++.++|+||||||+.||++|+++|++||++||++|+|.||+|+||+++||+++|++|+|+++|+++|++||| T Consensus 559 ~~~i~~si~~~~~~~v~epn~~~l~~~i~~~i~~~L~~l~~~gal~gf~V~~d~~~nt~~~i~~G~~~~~i~~~p~~pae 638 (663) T protein:vir:10 559 FNMLKKNIGDTSKYELFENNDAFTRQSFRMEVSQYLDNIRSLGGVYDFRVVCDTTNNTPQVIDSNEFVATIYIKAPRSIN 638 (663) T ss_pred HHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeEEEEcCCCCCHHHhhCCeEEEEEEEEecCCcc Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred EEEEEEEEeecCccHHHHHHhhcC Q lcl|Aclame:pro 637 YITLNFVATATGADFDELIGAVGG 660 (660) Q Consensus 637 ~i~~~~~~~~~~~~~~e~~~~v~~ 660 (660) ||+|||+|++++++|+|++++|+= T Consensus 639 ~I~~~~~~~~~~~~f~e~~~~~~~ 662 (663) T protein:vir:10 639 YITLNFVATSTGANFDELIGPAQL 662 (663) T ss_pred eEEEEEEEEecCccHHHHHHHHhc Confidence 999999999999999999999999 No 10 >protein:vir:106427 Length: 679 # NCBI annotation: gp18 tail sheath protein # Family: family:all:661 # MgeID: mge:1474 # MgeName: Aeh1 # Cross-refs: genbank:acc:NP_944106;genbank:gi:38640150;genbank:GeneID:2658188 Probab=100.00 E-value=2.5e-161 Score=901.03 Aligned_cols=659 Identities=53% Similarity=0.930 Sum_probs=519.2 Q ss_pred CccccCceEEEEecCCcccccCCcCceeEEeecccCCCCccEEecCHHHHHHHcCCcCCcchhHHHHHHHHHhcCCEEEE Q lcl|Aclame:pro 1 MALLSPGVELKETTVQSTVVNNSTGTAALAGKFQWGPAFQIKQITDEVALVDMFGTPNTDTADYFMSAMNFLQYGNDLRV 80 (660) Q Consensus 1 ~~~~~PGVyveE~~~~~~i~gv~Ts~~afvG~~~~Gpv~~p~~i~s~~e~~~~fG~~~~~~~~~~~v~~~f~ngG~~~~v 80 (660) |+|+||||||||+|++++|+||+||++||||+|+|||+|+|++|+||.||++.||++++.+|++|++++||+|||++||| T Consensus 1 ~~~~~Pgvyv~e~~~~~~i~~~~t~~~~~vg~~~~gp~~~p~~i~s~~~~~~~fg~~~~~~~~~~~~~~~f~~gg~~~~v 80 (679) T protein:vir:10 1 MTLLSPGVETKEINLQTTIARSSTGRAALVGKFNWGPAYQISQVVSEVDLVDKFGRPDDQTADSFFSGVNFLNYGNDLRL 80 (679) T ss_pred CceecCceEEEeecCCcccccCccccceeeecccCCCCccCEEecCHHHHHHHcCCcccccchHHHHHHHHHhCCCeEEE Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred EEccCccccccccccccccccccccccccccccceeEEeccccccccccceeeeecCCceeeEEeecccccccccccccc Q lcl|Aclame:pro 81 VRAVDRDTAKNSSPVAGNINFTISSAGTNYRVGDKVVVKYSTDIIEPDGEVTSVDSDGKILNIFIPSGKIIAKAKEIGEY 160 (660) Q Consensus 81 vRv~~~~~~~~a~~~~~~l~~t~~~~g~~~~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~a~~~~~~ 160 (660) |||.+++..+++.+..+.+..++..++....+++.+++....... .......++.++.....+.+.............. T Consensus 81 vrv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~s~~-~~~~~~~~~~~~~~~~~~v~~~~~~~~a~~~~~~ 159 (679) T protein:vir:10 81 VRVLNETKSRNSSALYQSLSYTITSPGVDYKVGDVVNVLQGGNVI-ATGKVTVVNASGGIVAFYVPTAAIIDKAKSLNDY 159 (679) T ss_pred EEccCcccccccccccccccccccccccccccccceeeeeCCCcc-cceeEEEeeccCceeeeeeccccccccccccccc Confidence 999999988888888888888888888877788888776554332 2233344444443333333333222222222222 Q ss_pred cccccceeeeeecc--ccccceeeeecccccccccccccccccccc-----cccceeeeccccccccccccccccccccc Q lcl|Aclame:pro 161 PELGSNWTAEMSGS--SSGLSAVITIDSVVMDSGILLTEVETSEEA-----ITSLTFQESIKKYGVPGVVALYPGELGDQ 233 (660) Q Consensus 161 ~~~~~~~~~~~~~~--~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~a~~~g~~g~~ 233 (660) +............. ..+......+.....+....+......... ...............+...+...+.+++. T Consensus 160 ~~l~~a~~~~~~~~t~~~g~~~~~~v~~v~~~~~~~~~~~~~a~~~i~~~~~~~~t~~~~~~~~~~~~~~A~~~g~~gn~ 239 (679) T protein:vir:10 160 PALDNAWQIQFAAGGPGAGQAATATVVGINLDSTIFVPNDEYAMSAISERSETKRTFIDICEEMKVPAIVARYAGTYGDN 239 (679) T ss_pred ceecccceeeeeeccccccceeeeeeeeeccCCceeeccccccccccccccccchhhhhhhhccccceeeeecccccCCc Confidence 22222211211111 111111122222222222222222211111 11111222233344455667777888888 Q ss_pred ccccccccccccccceeeeeeccc---------c-ccccccceeeeeccccCcccceeecccCCcccceeEEeecccccc Q lcl|Aclame:pro 234 LEIEIVSKADYDKGASAQLKIYPD---------G-GTRYSTAKAIFGYGPQTDDQYAIIVRRNDSVVQSVVLSTKRGERD 303 (660) Q Consensus 234 i~v~i~s~~~~~~~~~~~~~v~~~---------~-~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~e~~~v~~~~~~~~ 303 (660) +.+.+...............+... . .............+.....++.+.+...+...+.+.++..+++.. T Consensus 240 i~v~~va~~~~~~~~~~~a~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvv~~~g~~~~~~~~~~~~~~~~ 319 (679) T protein:vir:10 240 IKVLMIAYKDYYKFNEAGKIVSVNTINPKVFPTGLDYGNVTPSSYLEFGPQNESQFAFIVFNNGVAVESKILSTKPGDRD 319 (679) T ss_pred ceEEEEeecccccccccccccccccccccccccccccccceeeeecccccccccceeeEEecccccccceeeeccccccc Confidence 776554433221111100000000 0 011111222223344555667777778888889998888888777 Q ss_pred ccccccchhhhhhcCCceEEEEEecCCCcccceeeeeeccccccccccchhhhhhhhhhhhhhhcCcceeecccccCCch Q lcl|Aclame:pro 304 IYGSNIFIDDFFAKGASNYIFATAQGWPKGFSGVIKLNGGLSSNETVEAGDLMEAWDLFADRESVNAQLFIAGSCAGESL 383 (660) Q Consensus 304 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (660) ..+...++..+..++.+.++.......+...+..+++.||.++...++..+++.+++.+...+...+++++.+....... T Consensus 320 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~p~~~~~~~ 399 (679) T protein:vir:10 320 IYGTSIYINEYFGNGYSSFVQGVAESWPVGYTGVLAFGGGQSSNTDISAAEFMKGWDMFADREHTDVNLFIAGAVAGEGA 399 (679) T ss_pred ccchhhhhhhhhcCcccceeeeccccccccccceeeccCCccCCCccchhhhhhhhhhhhcccccccceEEecCCCCCch Confidence 77777777788888888888877777777788889999999998888888999999988888888888888888877777 Q ss_pred hhHHHHHHHHHHHHhhccCeEEEeccccceEEecCCCCcHHHHHHHhhhccc---ccccccccCcceEEEEechhccccc Q lcl|Aclame:pro 384 EVASTVQKHVVAIGDSRQDCLVLCSPPRAAVVGIPVNRAVDNLVDWRTASGT---YTDNNFNISSTYAAIDGNYKYQYDK 460 (660) Q Consensus 384 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~s~~~~~~~p~~~~~d~ 460 (660) +...+|+.+|++||+++++||+++|+|+...++.+..++.+++.+||...+. ......+++|+|+++||||++++|+ T Consensus 400 ~~~~~v~~~l~~~~~~~~~~~ai~d~p~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~s~~~~~~~p~~~~~d~ 479 (679) T protein:vir:10 400 QIASTVQKAVVAIADERRDCLVLISPPREYMINQPAASVVRKLVDWRRGVNQAGISLDDNMNIGTTYASVDGNYKYQYDK 479 (679) T ss_pred hhhHHHHHHHHHHHHhhCCeEEEEeccccccccccccchHHHHHHHHhhcccccchhhhhhccCcceEEEEccceeeecc Confidence 7888999999999999999999999999998999999999999999986543 3334557899999999999999999 Q ss_pred ccccceeechHHHHHHHHHHhhccCCceecccceeeceeeecccccccCChhhhhhhccccceEEEEecCCeEEEeccee Q lcl|Aclame:pro 461 YNDVNRWVPLAADIAGLCARTDNISQPWMSPAGYNRGQILNVIKLAIETRQAQRDRLYQEAINPVTGTGGDGYVLYGDKT 540 (660) Q Consensus 461 ~~~~~~~~p~s~~~AG~~a~~d~~~g~~~span~~~~~v~~~~~~~~~~~~~e~~~Ln~~gin~i~~~~g~G~~~wG~rT 540 (660) .++..+++|||+++||+|||+|.++||||||+|+++.+|.+++++++.+++.|++.||++||||||+|+++|+++||+|| T Consensus 480 ~~~~~~~~p~sg~vAGl~Ar~D~~~g~~~sPan~~~~~i~g~~~~~~~~~~~~~~~Ln~~gin~i~~~~g~G~~~wG~rT 559 (679) T protein:vir:10 480 YNDVNRWIPLAADIAGLCARTDTVGQPWQSPAGFNRGQIVNVIKLAVDTRQAHRDEMYTNGINPIVGFAGQGYILYGDKT 559 (679) T ss_pred cCCceEEechHHHHHHHHHHhhccCCcEECcCCeeeccccccccceeecChhhHHhhhhCCceEEEEecCCeEEEEcccc Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred cCCCCcccceehhhHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhcCCeeeEEEEEecCCCCHHHhhC Q lcl|Aclame:pro 541 ATSVPSPFDRINVRRLFNMVKTNIGSASKYRLFELNNAFTRSSFRTETSQYLQGIKALGGVYNFKVVCDTTNNTPAVIDR 620 (660) Q Consensus 541 ~~~~~~~~~~i~vrR~~~~i~~~~~~~~~~~v~epn~~~~~~~i~~~i~~~l~~l~~~gal~g~~v~~d~~~nt~~~i~~ 620 (660) +++++++|+||||||||+|||++|++.++|+||||||+.||++|+++|++||++||++|+|.||+|+||+++||+++|++ T Consensus 560 ~~~~~s~~~~i~vrR~~~~i~~si~~~~~~~v~epn~~~~~~~i~~~i~~fL~~l~~~gal~gf~v~~d~~~nt~~~i~~ 639 (679) T protein:vir:10 560 ASQAPTPFDRINVRRLFNLLKKSISESAKYKLFELNDAFTRSSFRSEVGSYLDTIRSLGGIYDFRVVCDESNNTPAVIDR 639 (679) T ss_pred cCCCCcccceEehhhHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeEEEEcCCCCCHHHhhC Confidence 99998999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred CEEEEEEEEEecCcceEEEEEEEEeecCccHHHHHHhhcC Q lcl|Aclame:pro 621 NEFVATFYLQPARSINYITLNFVATATGADFDELIGAVGG 660 (660) Q Consensus 621 G~~~~~i~~~p~~p~e~i~~~~~~~~~~~~~~e~~~~v~~ 660 (660) |+|+++|+|+|++|||||+|||+|++++++|+|++++|+= T Consensus 640 G~~~~~i~~~p~~pae~i~~~~~~~~~~~~~~e~~~~~~~ 679 (679) T protein:vir:10 640 NEFVATILIKPARSINYITLSFVATSTGADFDELVGSFQQ 679 (679) T ss_pred CeEEEEEEEEecCCccEEEEEEEEeecCccHHHHHHHhcC Confidence 9999999999999999999999999999999999999999 No 11 >protein:vir:98263 Length: 664 # NCBI annotation: gp18 tail sheath monomer # Family: family:all:661 # MgeID: mge:1667 # MgeName: RB43 # Cross-refs: genbank:acc:YP_239196;genbank:gi:66391671;genbank:GeneID:3416365 Probab=100.00 E-value=8.8e-161 Score=898.06 Aligned_cols=657 Identities=61% Similarity=1.022 Sum_probs=531.9 Q ss_pred CccccCceEEEEecCCcccccCCcCceeEEeecccCCCCccEEecCHHHHHHHcCCcCCcchhHHHHHHHHHhcCCEEEE Q lcl|Aclame:pro 1 MALLSPGVELKETTVQSTVVNNSTGTAALAGKFQWGPAFQIKQITDEVALVDMFGTPNTDTADYFMSAMNFLQYGNDLRV 80 (660) Q Consensus 1 ~~~~~PGVyveE~~~~~~i~gv~Ts~~afvG~~~~Gpv~~p~~i~s~~e~~~~fG~~~~~~~~~~~v~~~f~ngG~~~~v 80 (660) |+|+||||||||+|++++|+||+||++||||+|+|||+|+|++|+||.||+|.||++++.+|++|+|++||+|||++||| T Consensus 1 ma~~~PgVyv~E~~~~~~i~~~~ts~~~~vG~~~~Gp~~~p~~i~s~~d~~~~fG~~~~~~~~~~~v~~~f~ngg~~~~v 80 (664) T protein:vir:98 1 MALQSPGIETKETSVQSTVVRNSTGRAAIVGKFSWGPAYQIRQISNEVELVNYFGAPDNLTADYFMSAVNFLQYGNDLRL 80 (664) T ss_pred CceecCceEEEecCCCcccccccccceEEEeeccCCCCCccEEecCHHHHHHhcCCccccchhHHHHHHHHHhcCCeEEE Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred EEccCccccccccccccccccccccccccccccceeEEeccccccccccceeeeecCCceeeEEeecc--cccccccccc Q lcl|Aclame:pro 81 VRAVDRDTAKNSSPVAGNINFTISSAGTNYRVGDKVVVKYSTDIIEPDGEVTSVDSDGKILNIFIPSG--KIIAKAKEIG 158 (660) Q Consensus 81 vRv~~~~~~~~a~~~~~~l~~t~~~~g~~~~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~--~~~~~a~~~~ 158 (660) |||++.+..+++....+.+.+++..++..+.+++.+.+.+..............+..+.......... .......... T Consensus 81 vRv~~~~~~~~a~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~gn~~~v~i~~~~~~~~~~~~~~~ 160 (664) T protein:vir:98 81 VRVVDKDAAKNASAIFNQIKTTIASQGSNYNVGDVIKVKYSNTVVEENGKVTQVDSNGKILAVTIPKRKKSLLVLNRSVL 160 (664) T ss_pred EEecCccccccccccccccceeeccCCcccccccceeEeecCcccccceeeccCCCCCceeeEeeccCccceeecccccc Confidence 99999888888888888888888889888888998888876655443333322222222222221111 1110000000 Q ss_pred cccccccceeeeeeccccccceeeeecccccccccccccccccccccccceeeecccccccccccccccccccccccccc Q lcl|Aclame:pro 159 EYPELGSNWTAEMSGSSSGLSAVITIDSVVMDSGILLTEVETSEEAITSLTFQESIKKYGVPGVVALYPGELGDQLEIEI 238 (660) Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~g~~g~~i~v~i 238 (660) .... .............+............+....+.........+................+.+.+++.+++.+++.+ T Consensus 161 ~~~~-~~~~~~s~~~~s~g~a~a~~v~~v~~d~~~~~~~~~~a~~~i~~~~~~~~~~~~~~~~~~a~~~G~~Gn~isv~i 239 (664) T protein:vir:98 161 TQIF-LLVGTTEIVSQSSGVSASITIDGIESDSGITLLNLDIAKETIQGTSFQTLTQKYQIPSVVALYPGELGSTVQVEI 239 (664) T ss_pred cccc-eecccceeeeeecccceeeecccccccceeeccccceeeeccccccceeeeeccccceeeeeecccccceeeeee Confidence 0000 000011111112222222222233333332222222223333344444444555666777888999999998888 Q ss_pred cccccccccceeeeeeccccccccccceeeeeccccCcccceeecccCCcccceeEEeeccccccccccccchhhhhhcC Q lcl|Aclame:pro 239 VSKADYDKGASAQLKIYPDGGTRYSTAKAIFGYGPQTDDQYAIIVRRNDSVVQSVVLSTKRGERDIYGSNIFIDDFFAKG 318 (660) Q Consensus 239 ~s~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~e~~~v~~~~~~~~~~~~~~~~~~~~~~g 318 (660) .+......... ..+.............+...+...++.+.+.+..++.+.+++.++.+.+.+...+...+...+..++ T Consensus 240 ~s~~~~~~~~~--i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (664) T protein:vir:98 240 ISKAAYDTGAM--ISGYPSGISVKNSGRSVMTYGPQTDNQYAFVVRRGGIVQESFIVSTDKTDKDIYGVNIYMDDFFANG 317 (664) T ss_pred cccccccCcce--EeeccCceecccceeeeeeccccCccceeEEEecCCceeeeEEeecccCcccceeeeeechhheecc Confidence 77666554432 2344455555556666667777788889999999999999999998888888877777777788888 Q ss_pred CceEEEEEecCCCcccceeeeeeccccccccccchhhhhhhhhhhhhhhcCcceeecccccCCchhhHHHHHHHHHHHHh Q lcl|Aclame:pro 319 ASNYIFATAQGWPKGFSGVIKLNGGLSSNETVEAGDLMEAWDLFADRESVNAQLFIAGSCAGESLEVASTVQKHVVAIGD 398 (660) Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 398 (660) .+.++.......+........+.||.+....++..+...++..|...+.+.+++++.++......+...+|+.+|++||+ T Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~gg~~~~~~~g~~~~~tgl~~l~~~~~~~~~ll~~p~~~~~~~~~~~~v~~al~~~a~ 397 (664) T protein:vir:98 318 GSQYVFGTSMNWPKGFSGILEFGGGLSSNDTVGADELMTGWDMFADREALHVPLLIAGGCAGESVEIASTVQKHVISIGD 397 (664) T ss_pred cceeeeeecccCCcccceeEeccCccccccccCchhHHHHHHhhhcccccccceEEecCCCCCcHHHHHHHHHHHHHHHH Confidence 88888777777777777778888888877667777778888888888888888888777766666778899999999999 Q ss_pred hccCeEEEeccccceEEecCCCCcHHHHHHHhhhcc----cccccccccCcceEEEEechhcccccccccceeechHHHH Q lcl|Aclame:pro 399 SRQDCLVLCSPPRAAVVGIPVNRAVDNLVDWRTASG----TYTDNNFNISSTYAAIDGNYKYQYDKYNDVNRWVPLAADI 474 (660) Q Consensus 399 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~s~~~~~~~p~~~~~d~~~~~~~~~p~s~~~ 474 (660) ++++||+++|+|+..+++.+.+++.+++.+||+... .......+++|+|+++||||++++|+.++..+++|||+++ T Consensus 398 ~~~~~~a~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~p~~~~~d~~~~~~~~~p~sg~~ 477 (664) T protein:vir:98 398 ERQDCTVFVSPPRSLLVNIPLATAVDNIVEWRTGYKISGGTPVDNNLNVSSSYGFLDGNYKYQYDKYNDVNRWVPLAGDI 477 (664) T ss_pred hcCCeEEEEccccceeccCCccccHHHHHHHhhhccccccchhhhhcCCccceEEEEcCeEEEecccCCceEEechHHHH Confidence 999999999999999999999999999999998643 3334455799999999999999999999999999999999 Q ss_pred HHHHHHhhccCCceecccceeeceeeecccccccCChhhhhhhccccceEEEEecC-CeEEEecceecCCCCcccceehh Q lcl|Aclame:pro 475 AGLCARTDNISQPWMSPAGYNRGQILNVIKLAIETRQAQRDRLYQEAINPVTGTGG-DGYVLYGDKTATSVPSPFDRINV 553 (660) Q Consensus 475 AG~~a~~d~~~g~~~span~~~~~v~~~~~~~~~~~~~e~~~Ln~~gin~i~~~~g-~G~~~wG~rT~~~~~~~~~~i~v 553 (660) ||+|||+|.++||||||+|+++.++.|++++++.+++.|++.||++|||+|++|++ +|+++||+||++++|++|+|||| T Consensus 478 AGl~A~~D~~~g~~~span~~~~~i~g~~~~~~~~~~~~~~~Ln~~gIn~i~~~~~~~G~~~wG~rT~~~~~s~~~~i~v 557 (664) T protein:vir:98 478 AGLCVYTDSVANPWMSPAGYNRGQIRNCIKLAIEPRTAHRDAMYQVQINPVTGFAGGSGFVLYGDKTLTSVPSPFDRINV 557 (664) T ss_pred HHHHHHhhhcCCcEECcCCceeeeeeccccceeecChhhHHHHHhCCCeEEEEeeCCCcEEEEcccccCCCCcccceEee Confidence 99999999999999999999999999999999999999999999999999999997 69999999999999889999999 Q ss_pred hHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhcCCeeeEEEEEecCCCCHHHhhCCEEEEEEEEEecC Q lcl|Aclame:pro 554 RRLFNMVKTNIGSASKYRLFELNNAFTRSSFRTETSQYLQGIKALGGVYNFKVVCDTTNNTPAVIDRNEFVATFYLQPAR 633 (660) Q Consensus 554 rR~~~~i~~~~~~~~~~~v~epn~~~~~~~i~~~i~~~l~~l~~~gal~g~~v~~d~~~nt~~~i~~G~~~~~i~~~p~~ 633 (660) ||||+||+++|++.++|+||||||+.||++|+++|++||++||++|+|.||+|+||+++||++||++|+|+++|+++|++ T Consensus 558 rR~~~~i~~si~~~~~~~v~epn~~~l~~~i~~~i~~~L~~l~~~gal~g~~V~~d~~~nt~~~i~~G~~~~~i~~~p~~ 637 (664) T protein:vir:98 558 RRLFNMIKKDIGDNAKYKLFENNDDFTRASFRMDTGQYMTNIRALGGCYDYRVICDTTNNTPDVIDRNEFVATVYVKPPR 637 (664) T ss_pred hhHHHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCceeeeEEEEcCCCCCHHHhhCCeEEEEEEEEecC Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred cceEEEEEEEEeecCccHHHHHHhhcC Q lcl|Aclame:pro 634 SINYITLNFVATATGADFDELIGAVGG 660 (660) Q Consensus 634 p~e~i~~~~~~~~~~~~~~e~~~~v~~ 660 (660) |||||+|||+|++++++|+|++++=.= T Consensus 638 pae~I~~~~~q~~~~~~~~e~~~~~~~ 664 (664) T protein:vir:98 638 SINYITLNFVATSTGADFDELVGPQAV 664 (664) T ss_pred CcceEEEEEEEeecCcchhHhcccccC Confidence 999999999999999999999987655 No 12 >protein:vir:5663 Length: 671 # NCBI annotation: tail sheath protein # Family: family:all:661 # MgeID: mge:119 # MgeName: KVP40 # Cross-refs: genbank:acc:NP_899602;genbank:gi:34419589;genbank:GeneID:2545776 Probab=100.00 E-value=2e-150 Score=841.27 Aligned_cols=652 Identities=49% Similarity=0.826 Sum_probs=472.4 Q ss_pred CccccCceEEEEecCCcccccCCcCceeEEeecccCCCCccEEecCHHHHHHHcCCcCCcchhHHHHHHHHHhcCCEEEE Q lcl|Aclame:pro 1 MALLSPGVELKETTVQSTVVNNSTGTAALAGKFQWGPAFQIKQITDEVALVDMFGTPNTDTADYFMSAMNFLQYGNDLRV 80 (660) Q Consensus 1 ~~~~~PGVyveE~~~~~~i~gv~Ts~~afvG~~~~Gpv~~p~~i~s~~e~~~~fG~~~~~~~~~~~v~~~f~ngG~~~~v 80 (660) |+|+||||||||+|++++|+||+||++||||+|+|||+|+|++|+||.||+|+||++++.+|++|+|++||+|||++||| T Consensus 1 ~~~~~Pgvyv~e~~~~~~i~~v~t~~~~fvG~~~~Gp~~~p~~v~s~~~~~~~fG~~~~~~~~~~~v~~~f~ngg~~~~v 80 (671) T protein:vir:56 1 MTLLSPGIENKEINLASAIGRAATGRAAMVGKFEWGPAYSITQVTSESDLVTIFGRPNDYTAASFMTANNFLKYGNDLRL 80 (671) T ss_pred CceecCceEEEeecCcccccccCcccceEEecccCCCCccCEEcCCHHHHHHHcCCcCCCcchhHHHHHHHHhcCCeEEE Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred EEccCccccccccccccccccccccccccccccceeEEeccccccc-cccceeeeec--CCceeeEEeeccccccccccc Q lcl|Aclame:pro 81 VRAVDRDTAKNSSPVAGNINFTISSAGTNYRVGDKVVVKYSTDIIE-PDGEVTSVDS--DGKILNIFIPSGKIIAKAKEI 157 (660) Q Consensus 81 vRv~~~~~~~~a~~~~~~l~~t~~~~g~~~~~~~~~~v~~~~~~~~-~~~~v~~~~~--~~~~~~~~~~~~~~~~~a~~~ 157 (660) ||+++++..+++....+.+..+..+.. ...+++.+.+........ ....+...+. ++.....+............. T Consensus 81 vrv~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~v~~~~~~ 159 (671) T protein:vir:56 81 VRICDATTAQNATPLYNAVEYTIGASN-GCVVGDDITITYSGVGALTAKGKVLEVDAGNNNAASKIFLPSAEIVAAAKSD 159 (671) T ss_pred EEecCccccccchhhccccccccccCc-ceeeceeeeeecCcccccccCcceeEEeeeccceeeeeeccceeEEEeeecc Confidence 999998888887776666665554433 334566666554433211 1122222111 111111111111111100000 Q ss_pred ccccccccceeeeeeccccccceeeeecccccccc--cccccccccccccccceeeeccccccccccccccccccccccc Q lcl|Aclame:pro 158 GEYPELGSNWTAEMSGSSSGLSAVITIDSVVMDSG--ILLTEVETSEEAITSLTFQESIKKYGVPGVVALYPGELGDQLE 235 (660) Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~g~~g~~i~ 235 (660) ...+..+.....................+...... .................+.............+...+.+++.+. T Consensus 160 ~~~~~~~~~t~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~g~~g~~~~ 239 (671) T protein:vir:56 160 GNYPSVGTITLQPTQGDIALTNIEIIDTGSVYFPNIELAFDALTAIETEGGALKYADLIEKQGFPRLSARYVGDFGDAIS 239 (671) T ss_pred ccccccccccccccccceeeeeecccccceEEEeccccccccccccccccccccchhhhhcccccccccccccccCcceE Confidence 01110000000000000000000000000000000 0000000001111122222233333344556667777777776 Q ss_pred cccccccccccccee---------eeeeccccccccccceeeeeccccCcccceeecccCCcccceeEEeeccccccccc Q lcl|Aclame:pro 236 IEIVSKADYDKGASA---------QLKIYPDGGTRYSTAKAIFGYGPQTDDQYAIIVRRNDSVVQSVVLSTKRGERDIYG 306 (660) Q Consensus 236 v~i~s~~~~~~~~~~---------~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~e~~~v~~~~~~~~~~~ 306 (660) +.+............ .....................+.....++.+.+..++...+++.++...+.+...+ T Consensus 240 v~v~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~~~~~~ 319 (671) T protein:vir:56 240 VEIINYADYQTAFAFAAGHTLGDIELPIYPDGGTRSINLSSYFTFGPSNSNQYAVIVRVSGEVEEAFIVSTNPGDKDVNG 319 (671) T ss_pred EEEecccccccccccccceeeeeccccccccccccccccceeecccccccccceeEEeecCccceeEEEeecccccccch Confidence 655432222111111 11111122222222333344455566677777788888899998888888777777 Q ss_pred cccchhhhhhcCCceEEEEEecCCCcccceeeeeeccccccccccchhhhhhhhhhhhhhhcCcceeecccccCCchhhH Q lcl|Aclame:pro 307 SNIFIDDFFAKGASNYIFATAQGWPKGFSGVIKLNGGLSSNETVEAGDLMEAWDLFADRESVNAQLFIAGSCAGESLEVA 386 (660) Q Consensus 307 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (660) ...+...+..++++.++...... .........+.||.++.. ...+++.+++.+...+.+.+.+++.++......... T Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~gg~d~~~--~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~ 396 (671) T protein:vir:56 320 QSIFIDEYFENSGSAYITAIAEG-WKTESGAYNFGGGSDANA--GADDWMFGLDMLSDPEVLYTNLVIAGNAAAEEVSIA 396 (671) T ss_pred hhhhhhhhhcccCceEEEecCcc-cCCccccccccCcccccc--chhHHHHHHHhhhhccccceeEEEcCCCCCccchhH Confidence 77777777777777665544333 334445667788877643 445677788888777777777777666555554444 Q ss_pred HHHHHH-HHHHHhhccCeEEEeccccceEEecCCCCcHHHHHHHhhhcccccc----cccccCcceEEEEechhcccccc Q lcl|Aclame:pro 387 STVQKH-VVAIGDSRQDCLVLCSPPRAAVVGIPVNRAVDNLVDWRTASGTYTD----NNFNISSTYAAIDGNYKYQYDKY 461 (660) Q Consensus 387 ~~v~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~s~~~~~~~p~~~~~d~~ 461 (660) ..++.+ +..+|+.+++|++++|+|+..+++.+.+.+++++.+||........ ...+++|+|+++||||++++|+. T Consensus 397 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~p~~~~~d~~ 476 (671) T protein:vir:56 397 STVQKYAIDSVGNVRQDCVVFVSPPQSLIVNKQAGTAVANIQGWRTGIDPTNGQAVVDNLNVSTTYAVIDGNYKYQYDKY 476 (671) T ss_pred HHHHHHHHHHHHhhcCCEEEEEeccccccccccccccHHHHHHHhhhccccchhhhhhhccCCcceEEEecCceEEeccc Confidence 444444 5566678889999999999998999999999999999987654322 34568999999999999999999 Q ss_pred cccceeechHHHHHHHHHHhhccCCceecccceeeceeeecccccccCChhhhhhhccccceEEEEecCCeEEEecceec Q lcl|Aclame:pro 462 NDVNRWVPLAADIAGLCARTDNISQPWMSPAGYNRGQILNVIKLAIETRQAQRDRLYQEAINPVTGTGGDGYVLYGDKTA 541 (660) Q Consensus 462 ~~~~~~~p~s~~~AG~~a~~d~~~g~~~span~~~~~v~~~~~~~~~~~~~e~~~Ln~~gin~i~~~~g~G~~~wG~rT~ 541 (660) ++..+++|||+++||+|||+|.++||||||+|+++.++.++.++++.+++.|++.||++||||||+|+++|+++||+||+ T Consensus 477 ~~~~~~~p~s~~~AGl~Ar~D~~~g~~~span~~~~~i~g~~~~~~~~~~~~~~~Ln~~gIn~i~~~~~~G~~~wG~rT~ 556 (671) T protein:vir:56 477 NDRNRWVPLAGDIAGLCAYTDQVSQPWMSPAGFNRGQIKGVNRLAVDLRRAHRDALYQIGINPVVGFAGQGFVLYGDKTA 556 (671) T ss_pred CCceeEechHHHHHHHHHHhhccCCcEECcCCceeccccccccceeecChhHHHHHhhCCceEEEEecCCeEEEEcceec Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred CCCCcccceehhhHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhcCCeeeEEEEEecCCCCHHHhhCC Q lcl|Aclame:pro 542 TSVPSPFDRINVRRLFNMVKTNIGSASKYRLFELNNAFTRSSFRTETSQYLQGIKALGGVYNFKVVCDTTNNTPAVIDRN 621 (660) Q Consensus 542 ~~~~~~~~~i~vrR~~~~i~~~~~~~~~~~v~epn~~~~~~~i~~~i~~~l~~l~~~gal~g~~v~~d~~~nt~~~i~~G 621 (660) +++|++|+||||||||+||+++|++.++|+||||||+.||++|+++|++||++||++|+|.||+|+||+++||+++|++| T Consensus 557 ~~~~~~~~~i~vrR~~~~i~~si~~~~~~~v~epn~~~~~~~i~~~i~~fL~~l~~~gal~g~~v~~d~~~nt~~~i~~G 636 (671) T protein:vir:56 557 TQQASAFDRINVRRLFNLLKKAISDAAKYRLFELNDEFTRSSFKSEIDAYLTNIQDLGGVYDFRVVCDETNNPGSVIDRN 636 (671) T ss_pred CCCCcccceEehhhHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeEEEEcCCCCCHHHhhCC Confidence 98888999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred EEEEEEEEEecCcceEEEEEEEEeecCccHHHHHH Q lcl|Aclame:pro 622 EFVATFYLQPARSINYITLNFVATATGADFDELIG 656 (660) Q Consensus 622 ~~~~~i~~~p~~p~e~i~~~~~~~~~~~~~~e~~~ 656 (660) +|+++|+|+|++|||||+|||+|++++++|+|+++ T Consensus 637 ~~~~~i~~~p~~Pae~I~~~~~~~~~~~~f~e~~~ 671 (671) T protein:vir:56 637 EFVASIYVKPAKSINFITLNFVATSTDADFAEIIG 671 (671) T ss_pred eEEEEEEEEecCCcceEEEEEEEeecCcchhhhcC Confidence 99999999999999999999999999999999999 No 13 >protein:vir:104477 Length: 749 # NCBI annotation: gp18 # Family: family:all:661 # MgeID: mge:1548 # MgeName: P-SSM4 # Cross-refs: genbank:acc:YP_214663;genbank:gi:61806304;genbank:GeneID:3294532 Probab=100.00 E-value=1e-140 Score=788.00 Aligned_cols=635 Identities=30% Similarity=0.478 Sum_probs=404.4 Q ss_pred Cc--cccCceEEEEecCCcccccCCcCceeEEeecccCCCCccEEecCHHHHHHHcCCcCCcchhHHHHHHHHHhcCCEE Q lcl|Aclame:pro 1 MA--LLSPGVELKETTVQSTVVNNSTGTAALAGKFQWGPAFQIKQITDEVALVDMFGTPNTDTADYFMSAMNFLQYGNDL 78 (660) Q Consensus 1 ~~--~~~PGVyveE~~~~~~i~gv~Ts~~afvG~~~~Gpv~~p~~i~s~~e~~~~fG~~~~~~~~~~~v~~~f~ngG~~~ 78 (660) |+ |+||||||||++..++|++|+||++||||+|+|||+|+|++|+||.||+++||++++.+|++|+|++||+|||++| T Consensus 1 M~~~~~~PgVyv~e~~~~~~~~~~~t~~~~fvG~~~~Gp~~~p~~v~s~~~~~~~fG~~~~~~~~~~~v~~~F~ngg~~~ 80 (749) T protein:vir:10 1 MATNQSSPGVVIQERDLTTVSTIPTANVGVIAAPFTKGPVEEVIEITSERQLAEKFGEPNESNYEYWFSAAQFLSYGGLL 80 (749) T ss_pred CCccccCCeeEEEEecCCcccccccCceeEEEeccCCCCCccCEEcCCHHHHHHHcCCccCCcccHHHHHHHHhhcCCeE Confidence 66 9999999999988888999999999999999999999999999999999999999999999999999999999999 Q ss_pred EEEEccCcccccccccc------------------ccccccccccccccccccceeEEeccccccccccceeeeecCCce Q lcl|Aclame:pro 79 RVVRAVDRDTAKNSSPV------------------AGNINFTISSAGTNYRVGDKVVVKYSTDIIEPDGEVTSVDSDGKI 140 (660) Q Consensus 79 ~vvRv~~~~~~~~a~~~------------------~~~l~~t~~~~g~~~~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~ 140 (660) ||||+.+.....+.... ...+.+++..+| .||+.+++.+................ . . T Consensus 81 ~vvRv~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~pG---~~gn~l~v~v~~~~~~~~~~~~~~~~-~-~ 155 (749) T protein:vir:10 81 KTIRVNSSSLKNAVDTGTAPLVKNLQDYETSIEDASNNFSWVARTPG---DTGNSIGIFVTDAGADQVVVVPAPGS-G-N 155 (749) T ss_pred EEEEccCccccccccccccccccccccccccccccccceEEEeccCC---CcCCceEEEEEcCCCceeeeeecCCc-c-c Confidence 99999876544332111 122334455565 47777776654332211111100000 0 0 Q ss_pred eeEEeecc-----cccc-cccccccccc---c------ccceeeeeeccccccceeeeecccccccc-ccc--------- Q lcl|Aclame:pro 141 LNIFIPSG-----KIIA-KAKEIGEYPE---L------GSNWTAEMSGSSSGLSAVITIDSVVMDSG-ILL--------- 195 (660) Q Consensus 141 ~~~~~~~~-----~~~~-~a~~~~~~~~---~------~~~~~~~~~~~~~~~s~~~~~~~~~~~~~-~~~--------- 195 (660) ...+.... .+.. .......... . +...+.... .+ .............. ..+ T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~---~~-~~a~~~~~~~~~~~~~~~~~~s~~~~~ 231 (749) T protein:vir:10 156 EHEFVADAAVSAASGAAGKVFKYSIILTIDDVVGTFAPGSATTITIG---GS-AESVNVLAYDATNKKLEIGLPSGGVTG 231 (749) T ss_pred eeeEEeeecccccccccccccccceeeeeccccceeecccceeeecc---Cc-ccccccccccCCcceEEEeeecccccc Confidence 00000000 0000 0000000000 0 000000000 00 00000000000000 000 Q ss_pred --ccc---------cccccccccceeeecccccccccccccccccccccccccccccccccccceeeeeecccccccccc Q lcl|Aclame:pro 196 --TEV---------ETSEEAITSLTFQESIKKYGVPGVVALYPGELGDQLEIEIVSKADYDKGASAQLKIYPDGGTRYST 264 (660) Q Consensus 196 --~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~a~~~g~~g~~i~v~i~s~~~~~~~~~~~~~v~~~~~~~~~~ 264 (660) ... ......+.........................+..+.+......... ..............++.+ T Consensus 232 ~~a~~~~v~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~~~~~~~~~g~~~~it~v~~~~~~-~~~~t~~~~~~~a~~~gt 310 (749) T protein:vir:10 232 ILADNQVITQGTNTAKINVTIERKLLVALNKSSIEFAASDVVQDTNSTNITITSVRDEYTE-REYLPGVKWINVAPRPGT 310 (749) T ss_pred eeeeeecccccccccccccccccchhhhhccccceeeccccccCCccceeEEEeeeccccc-cccccceeeccccccccc Confidence 000 00000000000000000000000001111111111111111100000 000000011111112222 Q ss_pred ceeeeeccccCcccceeecc-------cCCcccceeE-EeeccccccccccccchhhhhhcCCceEEEEEecCCC----- Q lcl|Aclame:pro 265 AKAIFGYGPQTDDQYAIIVR-------RNDSVVQSVV-LSTKRGERDIYGSNIFIDDFFAKGASNYIFATAQGWP----- 331 (660) Q Consensus 265 ~~~~~~~~~~~~~~~~~~v~-------~~g~~~e~~~-v~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~----- 331 (660) .......+...+..+.+... ..+.+.|.+. ++.+.+.+...+...+........ +.++.+...+.+ T Consensus 311 ~~~~~~~~g~~D~~~v~v~~~~g~~~~~~g~v~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~-s~~v~~~~~~~~~~~~~ 389 (749) T protein:vir:10 311 SLYANGVGGHRDEMHVILVDIDGGVTGTVGALLERYIDVSKASDAKTSVGETNYYAEVIKQK-SEFIYWAEHESTLYAAT 389 (749) T ss_pred eeeeecccCCCCceEEEEecCCCeeeecccceeeeeeeccccccccccccccchhhhhhccC-CCEEEEEeccccccccc Confidence 22222222222222222222 2234555554 344444444444333333333222 222211110000 Q ss_pred ---------------------------------------cccceeeeeeccccc-----cccccchhhhhhhhhhhhhhh Q lcl|Aclame:pro 332 ---------------------------------------KGFSGVIKLNGGLSS-----NETVEAGDLMEAWDLFADRES 367 (660) Q Consensus 332 ---------------------------------------~~~~~~~~~~gg~~~-----~~~~~~~~~~~~~~~~~~~~~ 367 (660) ........+.+|.+. ...++..++.++++++...+. T Consensus 390 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gg~d~~~~~~~~~~~~~~~~~~~~~l~~~~~ 469 (749) T protein:vir:10 390 SSASDGLFGQTAANRQFNLFRSAAGSVDYPAGVTTLGSKNNATYYYRLSGGVNYTVSAGQYTITNTDIGSAYELIGDPES 469 (749) T ss_pred ccccccccccccccceeeccccccccceeccccccccccCCcEEEEEccCCcccccccccccccchhHHHHHHHhhhhhh Confidence 000011234444443 223455677888888888887 Q ss_pred cCcceeecccccCCchhhHHHHHHHHHHHHhhccCeEEEeccccceEEecCC-CCcHHHHHHHhhhcccccccccccCcc Q lcl|Aclame:pro 368 VNAQLFIAGSCAGESLEVASTVQKHVVAIGDSRQDCLVLCSPPRAAVVGIPV-NRAVDNLVDWRTASGTYTDNNFNISST 446 (660) Q Consensus 368 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~s~ 446 (660) ....+++.++... ..++..+++.+|++||+++++||+++|+|+...++... .....++..|+.. +.+|+ T Consensus 470 ~~~~~li~~~~~~-~~~~~~~v~~al~~~~~~~~~~~~~~d~p~~~~~~~~~~~~~~~~~~~~~~~---------~~~s~ 539 (749) T protein:vir:10 470 QIVDFIISGPSGT-SDANALAKITSLVNIAEERRDCMVFVSPRRGNVIGISNTTTITTNIVDFFKK---------LPSSS 539 (749) T ss_pred cccceEEEecCCC-CcchhHHHHHHHHHHHhhcCCEEEEEcCCCCcccccccchhhhhHHHHHHhh---------ccCce Confidence 7777766555443 33456789999999999999999999998766554433 3344566666654 35789 Q ss_pred eEEEEechhcccccccccceeechHHHHHHHHHHhhccCCceecccceeeceeeecccccccCChhhhhhhccccceEEE Q lcl|Aclame:pro 447 YAAIDGNYKYQYDKYNDVNRWVPLAADIAGLCARTDNISQPWMSPAGYNRGQILNVIKLAIETRQAQRDRLYQEAINPVT 526 (660) Q Consensus 447 ~~~~~~p~~~~~d~~~~~~~~~p~s~~~AG~~a~~d~~~g~~~span~~~~~v~~~~~~~~~~~~~e~~~Ln~~gin~i~ 526 (660) |+++||||++++|+.++..+++|||+++||+|||+|.++||||||+|+++.+|+|++++++.+++.|++.||++|||||+ T Consensus 540 ~~~~~~p~~~~~d~~~~~~~~~p~s~~vAGl~Ar~D~~~g~~~SPan~~~~~i~g~~~~~~~~~~~e~~~Ln~~gIn~i~ 619 (749) T protein:vir:10 540 YMVFDSGYKYIYDKYNDVYRYIPCNGDTAGLCLQTNEISEPWFSPAGFQRGVLRNAIKLAYTPNKAQRDQLYANRVNPIV 619 (749) T ss_pred eEEEEccceeeeccccCceEEechHHHHHHHHHHhhccCCcEECcCCceeeeeeccccceeecChhHHHhhhhCCceEEE Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred EecCCeEEEecceecCCCCcccceehhhHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhcCCeeeEEE Q lcl|Aclame:pro 527 GTGGDGYVLYGDKTATSVPSPFDRINVRRLFNMVKTNIGSASKYRLFELNNAFTRSSFRTETSQYLQGIKALGGVYNFKV 606 (660) Q Consensus 527 ~~~g~G~~~wG~rT~~~~~~~~~~i~vrR~~~~i~~~~~~~~~~~v~epn~~~~~~~i~~~i~~~l~~l~~~gal~g~~v 606 (660) +|+++|+++||+||+.+.|++|+||||||||+|||++|++.++|+||||||+.||++|+++|++||++||++|+|.||+| T Consensus 620 ~~~g~G~~~wG~rT~~s~d~~~~~i~vRRl~~~ie~si~~~~~~~v~epn~~~l~~~i~~~i~~fL~~l~~~G~i~~f~V 699 (749) T protein:vir:10 620 SFPGQGVVLYGDKTALGFASAFDRINIRRLFLTVERVISTAAKAQLFEQNDEAQRSLFINIVEPYLRDVQGRRGVVDFLV 699 (749) T ss_pred EecCCeEEEEcceecCCCCcccceeehhhhHHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCeeeeEE Confidence 99999999999999977777999999999999999999999999999999999999999999999999999999999999 Q ss_pred EEecCCCCHHHhhCCEEEEEEEEEecCcceEEEEEEEEeecCccHHHHHH Q lcl|Aclame:pro 607 VCDTTNNTPAVIDRNEFVATFYLQPARSINYITLNFVATATGADFDELIG 656 (660) Q Consensus 607 ~~d~~~nt~~~i~~G~~~~~i~~~p~~p~e~i~~~~~~~~~~~~~~e~~~ 656 (660) +||+++||+++|++|+|+++|+|+|++|||||+|||+|++++.+|+|+++ T Consensus 700 ~~d~~~Nt~~~i~~G~~~~~i~~~P~~pae~I~~~~~~~~~~~~~~e~~s 749 (749) T protein:vir:10 700 KCDSTNNTPEAVDRGEFYAEVFLKPTRTINYVQLTFVATRTGVSFAEVAS 749 (749) T ss_pred EEcCCCCCHHHhhCCEEEEEEEEEecCCccEEEEEEEEeecCcchHHHhC Confidence 99999999999999999999999999999999999999999999999999 No 14 >protein:vir:106984 Length: 743 # NCBI annotation: contractile sheath protein gp18 # Family: family:all:661 # MgeID: mge:1459 # MgeName: S-PM2 # Cross-refs: genbank:acc:YP_195136;genbank:gi:58532913;uniprot:Q5GQN6;genbank:GeneID:3260481 Probab=100.00 E-value=1e-140 Score=788.11 Aligned_cols=639 Identities=32% Similarity=0.482 Sum_probs=405.4 Q ss_pred Cc-cccCceEEEEec-CCcccccCCcCceeEEeecccCCCCccEEecCHHHHHHHcCCcCCcchhHHHHHHHHHhcCCEE Q lcl|Aclame:pro 1 MA-LLSPGVELKETT-VQSTVVNNSTGTAALAGKFQWGPAFQIKQITDEVALVDMFGTPNTDTADYFMSAMNFLQYGNDL 78 (660) Q Consensus 1 ~~-~~~PGVyveE~~-~~~~i~gv~Ts~~afvG~~~~Gpv~~p~~i~s~~e~~~~fG~~~~~~~~~~~v~~~f~ngG~~~ 78 (660) |. ||+|||||||++ ++++|+||+||++||||+|+|||+|+|++|+||.||++.||++++.+|++|+|++||+|||++| T Consensus 1 m~~~~~Pgvyv~e~~~~~~~i~~~~t~~~~~vg~~~~Gp~~~p~~i~s~~~~~~~fG~~~~~~~~~~~v~~~f~ngg~~~ 80 (743) T protein:vir:10 1 MASQVSPGILIKERDLTNAVVTGALQIRAAHASTFAKGPIGDIVNINTQKELVSVFGEPKEDNAEDWMVASEFLNYGGRL 80 (743) T ss_pred CccccCCceEEEEecCCCceeccCCcceeEEEEeccCCCCCcCEEecCHHHHHHHcCCccCCcchHHHHHHHHHhCCceE Confidence 76 999999999996 7899999999999999999999999999999999999999999999999999999999999999 Q ss_pred EEEEccCcccccccccc---------------ccccccccccccccccccceeEEeccccccccccceee--eecCCcee Q lcl|Aclame:pro 79 RVVRAVDRDTAKNSSPV---------------AGNINFTISSAGTNYRVGDKVVVKYSTDIIEPDGEVTS--VDSDGKIL 141 (660) Q Consensus 79 ~vvRv~~~~~~~~a~~~---------------~~~l~~t~~~~g~~~~~~~~~~v~~~~~~~~~~~~v~~--~~~~~~~~ 141 (660) ||||+.+++...++... ...+.+++..+| .|++.+++.+............. ........ T Consensus 81 ~vvrv~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~G---~~gN~i~V~v~~~~~d~~~~~~~~~~~~~~~~~ 157 (743) T protein:vir:10 81 AVVRAETTGVLNATTGSAGVLVKNRESWDAGSGNGEVFVARTAG---SWGNSLMGVLVDRGADYIVTFAATPTDTAVGTQ 157 (743) T ss_pred EEEEccCccccccccccccccccccccccccccceeEEEEeecc---ccccceEEEEecCCCcceeeeecccccccccee Confidence 99999987654443221 123344555566 46776666654322111110000 00000000 Q ss_pred eEEeecccccccccccccccccccce---------eeeeec-----cccccceeeeeccccccc-cccccccc-cccccc Q lcl|Aclame:pro 142 NIFIPSGKIIAKAKEIGEYPELGSNW---------TAEMSG-----SSSGLSAVITIDSVVMDS-GILLTEVE-TSEEAI 205 (660) Q Consensus 142 ~~~~~~~~~~~~a~~~~~~~~~~~~~---------~~~~~~-----~~~~~s~~~~~~~~~~~~-~~~~~~~~-~~~~~~ 205 (660) ............ ............ ...... .................. ........ ...... T Consensus 158 ~~~~~~~~~~~~--~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (743) T protein:vir:10 158 LLFSYSGTLVTG--EILSYDSATNTATITASGTLTSQYLLDTPEQGLIGSFTDNSTTEVGRTPGTYSNVPASGGTGTGAT 235 (743) T ss_pred eeeccccccccc--ceeeeeecCcceeeeeccccceeeecccccccccccccccccccccccccceeeEEeccccccccc Confidence 000000000000 000000000000 000000 000000000000000000 00000000 000000 Q ss_pred ccceeeecc----cccccccccccccccccccccccc----------cccccccccceee---------eeecccc---- Q lcl|Aclame:pro 206 TSLTFQESI----KKYGVPGVVALYPGELGDQLEIEI----------VSKADYDKGASAQ---------LKIYPDG---- 258 (660) Q Consensus 206 ~~~~~~~~~----~~~~~~~~~a~~~g~~g~~i~v~i----------~s~~~~~~~~~~~---------~~v~~~~---- 258 (660) ......... ................+....+.. ............. ....... T Consensus 236 ~tv~v~~~~~~vg~~v~~~~~~~~~~~~~~~~~~v~~~~~~~~t~~~~~~~~~~~g~~~~~a~~~~~~~~~~~~~~~~~~ 315 (743) T protein:vir:10 236 FNVVVADAGGGVGGSVVVTLANPGTGYNQGETLTIASAATGDGTDILVTVATLSDGTIAITELKDWYLNTEIGSTGIKLG 315 (743) T ss_pred ccccccccccccccccccccccccceeeeccccccccccccccccchhheecccccceeeeecccccccchhhccccccc Confidence 000000000 000000000000000000000000 0000000000000 0000000 Q ss_pred --ccccccceeeeeccccCccccee--------ecccCCcccceeE-EeeccccccccccccchhhhhhcCCceEE---- Q lcl|Aclame:pro 259 --GTRYSTAKAIFGYGPQTDDQYAI--------IVRRNDSVVQSVV-LSTKRGERDIYGSNIFIDDFFAKGASNYI---- 323 (660) Q Consensus 259 --~~~~~~~~~~~~~~~~~~~~~~~--------~v~~~g~~~e~~~-v~~~~~~~~~~~~~~~~~~~~~~g~~~~~---- 323 (660) .............+ ...+.+.+ .....+.+.+++. ++.+.+.+...+...+....... .+.++ T Consensus 316 ~~~~~~~t~~~~~~~~-~~~d~~~v~v~~~~~~~~~~~~~v~~~~~~~s~~~~~~~~~~~~~~~~~~~~~-~s~~~~~~~ 393 (743) T protein:vir:10 316 DIGPRPGTSQFATDNG-ITDDQVHFAVIDTTGELTGTANTIVERLTYLSKLSDARSEENANIYYKNVINE-QSAYLYHGN 393 (743) T ss_pred cccccceeeecccccc-ccccceEEEEecCcceeeeccCceeEEEeeeecccccccccCcceeecceecc-ccceeeccC Confidence 00000000000000 00111111 1123344556654 34444444433333322222111 11111 Q ss_pred ---------------------EEEecCCCcccceeeeeeccccccccccchhhhhhhhhhhhhhhcCcceeecccccCCc Q lcl|Aclame:pro 324 ---------------------FATAQGWPKGFSGVIKLNGGLSSNETVEAGDLMEAWDLFADRESVNAQLFIAGSCAGES 382 (660) Q Consensus 324 ---------------------~~~~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (660) ................+.||.|+.. .+..++..+++.+...+.++..+++.++.... T Consensus 394 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gG~d~~~-~~~~~~~~~~~~~~~~~~~~~~ll~~p~~~~~- 471 (743) T protein:vir:10 394 DAAVQIAASGEAWGQSSDQVLADAGTAFSRTTGYWVNLAGGNDDFA-YDAGEFGAAMDLFLDTEETEIDFVLMGGSMAD- 471 (743) T ss_pred cccceeeeccccCccccceeeeecccccccccceEEEeecCccccc-cchhHHHHHHHHhhhccccCcceEEecCcccC- Confidence 1111112223344567888887643 46677788888888888887777776655443 Q ss_pred hhhHHHHHHHHHHHHhhccCeEEEeccccceEE------ecCCCCcHHHHHHHhhhcccccccccccCcceEEEEechhc Q lcl|Aclame:pro 383 LEVASTVQKHVVAIGDSRQDCLVLCSPPRAAVV------GIPVNRAVDNLVDWRTASGTYTDNNFNISSTYAAIDGNYKY 456 (660) Q Consensus 383 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~p~~~ 456 (660) ..+..+++++|++||+++++||+++|+|..... ......+.+++..|++. +++|+|+++||||++ T Consensus 472 ~~~~~~v~~a~~~~~~~~~~~~a~~d~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~s~~~~~~~p~~~ 542 (743) T protein:vir:10 472 EADTKSKATKVIAIAASRKDALAFVSPHKGNQIASTGNVALSSAQQKENTIAFFSD---------LTSTSYAVFDSGYKY 542 (743) T ss_pred ccchHHHHHHHHHHHHhhCCeEEEEecCCCccccccccccccccccchHHHHHHHh---------ccCCeeEEEEcccee Confidence 345578999999999999999999999864322 22334455566666653 468999999999999 Q ss_pred ccccccccceeechHHHHHHHHHHhhccCCceecccceeeceeeecccccccCChhhhhhhccccceEEEEecCCeEEEe Q lcl|Aclame:pro 457 QYDKYNDVNRWVPLAADIAGLCARTDNISQPWMSPAGYNRGQILNVIKLAIETRQAQRDRLYQEAINPVTGTGGDGYVLY 536 (660) Q Consensus 457 ~~d~~~~~~~~~p~s~~~AG~~a~~d~~~g~~~span~~~~~v~~~~~~~~~~~~~e~~~Ln~~gin~i~~~~g~G~~~w 536 (660) ++|+.++..+++|||+++||++||+|.++||||||+|+++.+|.+++++++.+++.|++.||++|||||++|+++|+++| T Consensus 543 ~~d~~~~~~~~~p~s~~~AGl~a~~D~~~g~~~span~~~~gi~g~~~~~~~~~~~~~~~Ln~~gIn~i~~~~~~G~~~w 622 (743) T protein:vir:10 543 VYDRFTDKYRYIPCNGDVAGLCVQTSNQLDDWYSPAGLNRGGILNAVKLAYNPNKADRDELYQNRINPVVSLRGQGITLF 622 (743) T ss_pred eeccccCceeEechhHHHHHHHHHhhccCCcEEccCCeeeeeeeccccceecCChhHHHhHhhCCceEEEEecCCeEEEE Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred cceecCCCCcccceehhhHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhcCCeeeEEEEEecCCCCHH Q lcl|Aclame:pro 537 GDKTATSVPSPFDRINVRRLFNMVKTNIGSASKYRLFELNNAFTRSSFRTETSQYLQGIKALGGVYNFKVVCDTTNNTPA 616 (660) Q Consensus 537 G~rT~~~~~~~~~~i~vrR~~~~i~~~~~~~~~~~v~epn~~~~~~~i~~~i~~~l~~l~~~gal~g~~v~~d~~~nt~~ 616 (660) |+||++++|++||||||||||+||+++|++.++|+||||||+.+|++|+++|++||++||++|+|.||+|+||+++||++ T Consensus 623 G~rT~~s~d~~~~~i~vrR~~~~i~~si~~~~~~~v~e~n~~~~~~~i~~~i~~fL~~l~~~gal~~~~V~~d~~~nt~~ 702 (743) T protein:vir:10 623 GDKTALAAPSAFDRINVRRLFLNLEKRARRLAEGVLFEQNDATTRAGFSSALNSYLSEVQARRGVTDYLVICDESNNTPD 702 (743) T ss_pred cccccCCCCcccceEeehhhHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhcCceeeeEEEEcCCCCCHH Confidence 99999887789999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred HhhCCEEEEEEEEEecCcceEEEEEEEEeecCccHHHHHHh Q lcl|Aclame:pro 617 VIDRNEFVATFYLQPARSINYITLNFVATATGADFDELIGA 657 (660) Q Consensus 617 ~i~~G~~~~~i~~~p~~p~e~i~~~~~~~~~~~~~~e~~~~ 657 (660) +|++|+|+++|+++|++|||||+|||+|++++.+|+|++++ T Consensus 703 ~i~~G~~~~~i~~~p~~pae~I~~~~~~~~~~~~~~e~~~~ 743 (743) T protein:vir:10 703 IIDRNEFVAEVYVKPTRSINFITITFTATKTGVTFSEVVGR 743 (743) T ss_pred HhhCCeEEEEEEEEecCCcceEEEEEEEeecCcchHhhhcC Confidence 99999999999999999999999999999999999999999 No 15 >protein:vir:104858 Length: 729 # NCBI annotation: T4-like tail sheath protein # Family: family:all:661 # MgeID: mge:1630 # MgeName: P-SSM2 # Cross-refs: genbank:acc:YP_214361;genbank:gi:61806001;genbank:GeneID:3294378 Probab=100.00 E-value=6.9e-138 Score=772.53 Aligned_cols=632 Identities=31% Similarity=0.479 Sum_probs=379.4 Q ss_pred CccccCceEEEEec-CCcccccCCcCceeEEeecccCCCCccEEecCHHHHHHHcCCcC--CcchhHHHHHHHHHhcCCE Q lcl|Aclame:pro 1 MALLSPGVELKETT-VQSTVVNNSTGTAALAGKFQWGPAFQIKQITDEVALVDMFGTPN--TDTADYFMSAMNFLQYGND 77 (660) Q Consensus 1 ~~~~~PGVyveE~~-~~~~i~gv~Ts~~afvG~~~~Gpv~~p~~i~s~~e~~~~fG~~~--~~~~~~~~v~~~f~ngG~~ 77 (660) ++|+||||||||++ ++++|+||+||++||||+|+|||+|+|++|+||.||+|+||+|. +.++++|++++||+|||++ T Consensus 3 ~~~~~PgVyv~e~~~~~~~i~~v~ts~~~fvG~~~~Gp~~~p~~i~s~~~~~~~fG~~~~~~~~~~~~~~~~~f~ngg~~ 82 (729) T protein:vir:10 3 LNLASPGIVVREVDLTIGRVDPTSGSIGALVAPFAKGPVNDPQLIESEEDLLQTFGQPYSTDKHYEYWMVASSYLAYGGT 82 (729) T ss_pred ccccCCceEEEEecCCCcccccccccceeEEeccccCCCccCeEcCCHHHHHHHcCccccCCcchhHHHHHHHHHhCCce Confidence 67999999999996 69999999999999999999999999999999999999999984 5678999999999999999 Q ss_pred EEEEEccCcccccccccccccc--------------------------------ccccccccccccccceeEEecccccc Q lcl|Aclame:pro 78 LRVVRAVDRDTAKNSSPVAGNI--------------------------------NFTISSAGTNYRVGDKVVVKYSTDII 125 (660) Q Consensus 78 ~~vvRv~~~~~~~~a~~~~~~l--------------------------------~~t~~~~g~~~~~~~~~~v~~~~~~~ 125 (660) |||||+.+++...++....... .+.+..+| .|++.+++.+..... T Consensus 83 ~~vvRv~~~~~~~a~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~G---~~gn~~~v~v~~~~~ 159 (729) T protein:vir:10 83 MQVVRADDYNTQTGVGLKNAFVTGGVGVGATMLRITSNTHYNQLGYDENTISGVSVAAKNPG---TWANGIKVAIIDGKA 159 (729) T ss_pred EEEEecCcccccccccccccccccccccccccccccccccccccccccCCCcceEEEEeccC---ccccceeeEEecccC Confidence 9999999876554433211110 00111111 122222222211110 Q ss_pred ccccceeeeecCCceeeEEeecccccccccccccccccccceeeeeeccccccceeeeec-ccc-ccccccccccccccc Q lcl|Aclame:pro 126 EPDGEVTSVDSDGKILNIFIPSGKIIAKAKEIGEYPELGSNWTAEMSGSSSGLSAVITID-SVV-MDSGILLTEVETSEE 203 (660) Q Consensus 126 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~-~~~-~~~~~~~~~~~~~~~ 203 (660) ...... ....+........... . ........ .........+........ ..+ ..+............ T Consensus 160 ~~~~~~--~~~~~~~~~t~~~~~~-------~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~v~~~s~~~~~~~~~~~~ 228 (729) T protein:vir:10 160 DQILTV--ASGNTTAVGSAVTQSI-------S-KTIGTATG-TTTIDGVLKGIVTGSTDTTLEVKVISHISAAGVETAVE 228 (729) T ss_pred cceeee--eccccccceeeeeeec-------c-cccccccc-ceeeeeeecccccccccccccceecccccccccceecc Confidence 000000 0000000000000000 0 00000000 000000000000000000 000 000000000000000 Q ss_pred ccccceeeecccccccccccccccccccccccccccccccccccceeeeeecccccc-ccccceeeeeccccCccc---- Q lcl|Aclame:pro 204 AITSLTFQESIKKYGVPGVVALYPGELGDQLEIEIVSKADYDKGASAQLKIYPDGGT-RYSTAKAIFGYGPQTDDQ---- 278 (660) Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~a~~~g~~g~~i~v~i~s~~~~~~~~~~~~~v~~~~~~-~~~~~~~~~~~~~~~~~~---- 278 (660) ........ ...............+................................ .+.+.......+...+.. T Consensus 229 ~~~~~~~~-~~~~~s~~~~a~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~d~~~~~~ 307 (729) T protein:vir:10 229 YQQNGTYT-FDNSGSVNVIAAGSSGSGSAKSYTAQTDWFESQNIVLSNSTLEWDSIADAPGTSTYVSTRGGKNDEIHVLV 307 (729) T ss_pred ccccceee-ecccCccceeeeccccccccccceeeeccccccccccccccccccccccccccccccccccccccccceee Confidence 00000000 000000000000000000000000000000000000000000000000 000000000000000000 Q ss_pred ---ceeecccCCcccceeE-EeeccccccccccccchhhhhhcCCceEEEE----------------------------- Q lcl|Aclame:pro 279 ---YAIIVRRNDSVVQSVV-LSTKRGERDIYGSNIFIDDFFAKGASNYIFA----------------------------- 325 (660) Q Consensus 279 ---~~~~v~~~g~~~e~~~-v~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~----------------------------- 325 (660) ........+.+.+.+. ++...+.+...+...+........ +.++.. T Consensus 308 ~d~~~~~~~~~g~vve~~~~~s~~~~~~~~~~~~~~~~~vi~~~-s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (729) T protein:vir:10 308 IDDKGTITGNSGTILEKHLSLSKAKDAEYSVGSSSYWRDFLATN-SKYIFGGGATSGITTTGYSVSSTNTLDTDSGWDQN 386 (729) T ss_pred eccccccccCcccceeeeeeeeeccccccccccccccceeeccc-cceeeecccccccccccccccccceeccccccccc Confidence 0001122233333332 233333333222222221111111 000000 Q ss_pred -EecCCCcccceeeeeeccccccccc----------cchhhhhhhhhhhhhhhcCcceeecccccCCchhhHHHHHHHHH Q lcl|Aclame:pro 326 -TAQGWPKGFSGVIKLNGGLSSNETV----------EAGDLMEAWDLFADRESVNAQLFIAGSCAGESLEVASTVQKHVV 394 (660) Q Consensus 326 -~~~~~~~~~~~~~~~~gg~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 394 (660) ............+.+.+|.+..... ...++..++..+...+.+....++.+....+ ..+...++.+|+ T Consensus 387 a~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~v~~a~~ 465 (729) T protein:vir:10 387 AEGVNFGASGVATLTLAGGTNYGDKTDLTTSGALSSGVDDIISGYTLFENTEEIEVDFILMGAAHHP-KEQSQAVAEKVT 465 (729) T ss_pred cccccccccceeEEEeecccccccccccccccccccchhHHHHHHHHhhcccccccceeeecCCCCC-ccchHHHHHHHH Confidence 0001111222345566665543322 1233455666666666666655555544333 345678999999 Q ss_pred HHHhhccCeEEEeccccceEEe-cCC--------CCcHHHHHHHhhhcccccccccccCcceEEEEechhcccccccccc Q lcl|Aclame:pro 395 AIGDSRQDCLVLCSPPRAAVVG-IPV--------NRAVDNLVDWRTASGTYTDNNFNISSTYAAIDGNYKYQYDKYNDVN 465 (660) Q Consensus 395 ~~~~~~~~~~~~~~~~~~~~~~-~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~p~~~~~d~~~~~~ 465 (660) +||+++++|++++++|+...+. .+. .++.+++..|++. ..+++|+++||||++++|+.++.. T Consensus 466 ~~~~~~~~~~a~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~p~~~~~d~~~~~~ 536 (729) T protein:vir:10 466 AVAEARKDAVAFISPYRQAFLNDTVSGTVTVSNIDQTTENVVGFYAP---------LSSSTYSVFDSGYKYMFDRFNNTF 536 (729) T ss_pred HHHHhcCCeEEEecccccccccccccccccccccchhhHHHHHHHhh---------ccCCceEEEEcCeeEEecccCCce Confidence 9999999999999998765443 221 2344555555553 235789999999999999999999 Q ss_pred eeechHHHHHHHHHHhhccCCceecccceeeceeeecccccccCChhhhhhhccccceEEEEecCCeEEEecceecCCCC Q lcl|Aclame:pro 466 RWVPLAADIAGLCARTDNISQPWMSPAGYNRGQILNVIKLAIETRQAQRDRLYQEAINPVTGTGGDGYVLYGDKTATSVP 545 (660) Q Consensus 466 ~~~p~s~~~AG~~a~~d~~~g~~~span~~~~~v~~~~~~~~~~~~~e~~~Ln~~gin~i~~~~g~G~~~wG~rT~~~~~ 545 (660) +++|||+++||+|||+|.++||||||+|+++.+|.++.++++.++++|++.||++|||||++|+++|+++||+||+.+.+ T Consensus 537 ~~~p~s~~~aGl~a~~d~~~g~~~span~~~~~i~g~~~~~~~~~~~~~~~Ln~~gIn~i~~~~~~G~~~wG~rT~~~~d 616 (729) T protein:vir:10 537 RYVPLNGDIAGTCARTDIEQFPWFSPAGTARGPILNSVKLVYNPGKKQRDILYSNRINPVILSPGAGIILFGDKTGFGKS 616 (729) T ss_pred EEechhHHHHHHHHHhhccCCcEEccCCccccceecccceeeecChhhHhhhhhCCceEEEEecCCeEEEEcceecCCCC Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999997777 Q ss_pred cccceehhhHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhcCCeeeEEEEEecCCCCHHHhhCCEEEE Q lcl|Aclame:pro 546 SPFDRINVRRLFNMVKTNIGSASKYRLFELNNAFTRSSFRTETSQYLQGIKALGGVYNFKVVCDTTNNTPAVIDRNEFVA 625 (660) Q Consensus 546 ~~~~~i~vrR~~~~i~~~~~~~~~~~v~epn~~~~~~~i~~~i~~~l~~l~~~gal~g~~v~~d~~~nt~~~i~~G~~~~ 625 (660) ++|+|||||||++||+++|++.++|+||||||+.+|++|+++|++||++||++|+|.||+|+||+++||++||++|+|++ T Consensus 617 ~~~~~i~vrR~~~~i~~si~~~~~~~v~epn~~~~~~~i~~~i~~~L~~l~~~g~l~g~~v~~d~~~nt~~~i~~G~~~~ 696 (729) T protein:vir:10 617 SAFDRINVRRLFIYLEDAISAAAKDQLFEFNDELTRTNFVNIVEPFLRDVQAKRGIFDFVVICDETNNTAAVIDSNEFVA 696 (729) T ss_pred cccceeehhhhHHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhccceeeeEEEEcCCCCCHHHhhCCeEEE Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred EEEEEecCcceEEEEEEEEeecCccHHHHHHhh Q lcl|Aclame:pro 626 TFYLQPARSINYITLNFVATATGADFDELIGAV 658 (660) Q Consensus 626 ~i~~~p~~p~e~i~~~~~~~~~~~~~~e~~~~v 658 (660) +|+++|++|||||+|||+|++++.+|+|+++|| T Consensus 697 ~v~~~p~~p~e~i~~~~~~~~~~~~~~e~~~~~ 729 (729) T protein:vir:10 697 DIFIKPARSINFIGLTFVATRTGVAFEEVIGSV 729 (729) T ss_pred EEEEEecCCccEEEEEEEEeecCccHHHHHhcC Confidence 999999999999999999999999999999999 No 16 >protein:vir:79092 Length: 477 # NCBI annotation: gp13, phage tail sheath protein # Family: family:all:115 # MgeID: mge:1862 # MgeName: phiE255 # Cross-refs: genbank:acc:YP_001111213;genbank:gi:134288804;genbank:GeneID:4960766 Probab=100.00 E-value=3.4e-108 Score=609.78 Aligned_cols=469 Identities=17% Similarity=0.176 Sum_probs=325.7 Q ss_pred Cc-cccCceEEEEe-cCCcccccCCcCceeEEeecccCCCCccEEecCHHHHHHHcCCcCCcchhHHHHHHHHHhcCCEE Q lcl|Aclame:pro 1 MA-LLSPGVELKET-TVQSTVVNNSTGTAALAGKFQWGPAFQIKQITDEVALVDMFGTPNTDTADYFMSAMNFLQYGNDL 78 (660) Q Consensus 1 ~~-~~~PGVyveE~-~~~~~i~gv~Ts~~afvG~~~~Gpv~~p~~i~s~~e~~~~fG~~~~~~~~~~~v~~~f~ngG~~~ 78 (660) |+ |++|||||||+ +++++|++|+|+|++|||+|++||+|+|++|+||.||++ ||+.....++++++++||.|||++| T Consensus 1 M~~~~~pGVyv~E~~~g~~~I~~v~Tsv~~~VG~a~~~p~n~pv~its~~d~~~-~g~~~~~~tL~~Av~~~f~ngg~~~ 79 (477) T protein:vir:79 1 MAANYLHGVETIEKETGSRPVKVVKSAVIGLIGTAPIGPVNTPVQSLSDVDAAQ-FGPQLAGFTIPQALDAVYDYGSGTV 79 (477) T ss_pred CcCCCCCCeEEEEecCCcccccccCCceEEEEeecccCCCcccEEEccHHHHHH-hcCCCCCCcHHHHHHHHhhcCCceE Confidence 76 77999999999 589999999999999999999999999999999999986 8888889999999999999999999 Q ss_pred EEEEccCccccccccccccccccccccccccccccceeEEeccccccccccceeeeecCCceeeEEeecccccccccccc Q lcl|Aclame:pro 79 RVVRAVDRDTAKNSSPVAGNINFTISSAGTNYRVGDKVVVKYSTDIIEPDGEVTSVDSDGKILNIFIPSGKIIAKAKEIG 158 (660) Q Consensus 79 ~vvRv~~~~~~~~a~~~~~~l~~t~~~~g~~~~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~a~~~~ 158 (660) ||||+.+.+......... .+. ... .. ........... T Consensus 80 ~vvrV~~~~~~~~~~a~~---------~~~---~~~--------~~-------~~~~~~~~~~~---------------- 116 (477) T protein:vir:79 80 IVINVLDPAVHKSNAASE---------SVT---FDA--------AT-------GRAKLAHPAAA---------------- 116 (477) T ss_pred EEEeccCCcccccccccc---------ccc---ccc--------cc-------ccccccccccc---------------- Confidence 999998755332221100 000 000 00 00000000000 Q ss_pred cccccccceeeeeeccccccceeeeecccccccccccccccccccccccceeeecccccccccccccccccccccccccc Q lcl|Aclame:pro 159 EYPELGSNWTAEMSGSSSGLSAVITIDSVVMDSGILLTEVETSEEAITSLTFQESIKKYGVPGVVALYPGELGDQLEIEI 238 (660) Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~g~~g~~i~v~i 238 (660) ........... ..... ..... .... ...... T Consensus 117 ---------~~~v~~~~~~~--------~~~~~---------~~~~~-------~~~~----------------~~~~~~ 147 (477) T protein:vir:79 117 ---------NLVLKNDSGGT--------TYTEG---------TDYAV-------DLIN----------------GVITRI 147 (477) T ss_pred ---------eeEEeeccccc--------ccccC---------ccccc-------cccc----------------hhhhhh Confidence 00000000000 00000 00000 0000 000000 Q ss_pred cccccccccceeeeeeccccccccccceeeeeccccCcccceeecccCCcccceeEEeeccccccccccccchhhhhhcC Q lcl|Aclame:pro 239 VSKADYDKGASAQLKIYPDGGTRYSTAKAIFGYGPQTDDQYAIIVRRNDSVVQSVVLSTKRGERDIYGSNIFIDDFFAKG 318 (660) Q Consensus 239 ~s~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~e~~~v~~~~~~~~~~~~~~~~~~~~~~g 318 (660) .. .......... ...+ ....... . . T Consensus 148 ~~-------------------------------~~~~~~~~~~--------~~~~----~~~~~~~----~-------~- 172 (477) T protein:vir:79 148 KT-------------------------------GTIPAAATAA--------KATY----DYADPTK----V-------T- 172 (477) T ss_pred hc-------------------------------ccccccccee--------ecee----ccCCccc----c-------e- Confidence 00 0000000000 0000 0000000 0 0 Q ss_pred CceEEEEEecCCCcccceeeeeeccccccccccchhhhhhhhhhhhhhhcCcceeecccccCCchhhHHHHHHHHHHHHh Q lcl|Aclame:pro 319 ASNYIFATAQGWPKGFSGVIKLNGGLSSNETVEAGDLMEAWDLFADRESVNAQLFIAGSCAGESLEVASTVQKHVVAIGD 398 (660) Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 398 (660) .....+..+... ...+...+...+.. ....+....+|+.++..++..+|.++|+ T Consensus 173 ------------------~~~~~g~~~a~~------~~tg~~al~~~~~~--~~~~~~iv~apg~~~~~~v~~~l~~~~~ 226 (477) T protein:vir:79 173 ------------------AADIIGAVNAAG------MRTGMKALKDTYNL--YGYFSKILIAPAYCTQNSVSVELEAMAV 226 (477) T ss_pred ------------------eeeecccccccc------cchhhhhhhhhhhh--cccccceeeccccccchhHHHHHHHHHh Confidence 000000000000 00011111111111 1112233345666677889999999999 Q ss_pred hccCeEEEeccccceEEecCCCCcHHHHHHHhhhcccccccccccCcceEEEEechhcccccccccceeechHHHHHHHH Q lcl|Aclame:pro 399 SRQDCLVLCSPPRAAVVGIPVNRAVDNLVDWRTASGTYTDNNFNISSTYAAIDGNYKYQYDKYNDVNRWVPLAADIAGLC 478 (660) Q Consensus 399 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~p~~~~~d~~~~~~~~~p~s~~~AG~~ 478 (660) +++ |++++| .|.+.+.+++.+|++..+.. ..+++|.|+++||||++++|+.++..+++|||+++||++ T Consensus 227 ~~~-~~a~~d--------~p~~~~~~~~~~~~~~~~~~---~~~~~s~~~~~~~p~~~~~~~~~~~~~~~p~s~~~ag~~ 294 (477) T protein:vir:79 227 QLG-AIAYID--------APIGTTLAQALAGRGPAGTI---NFNTSSDRVRLCYPHVKVYDIATNAERLEPLSSRAAGLR 294 (477) T ss_pred hcC-eEEEEe--------cCCCCChHHHhhhhhhcccc---ccccccceEEEEcCeeEEecccCCceeeechHHHHHHHH Confidence 875 666554 56678889999999876653 346889999999999999999999999999999999999 Q ss_pred HHhhccCCceecccceeeceeeecc---cccccCChhhhhhhccccceEEEEecCCeEEEecceecC--CCCcccceehh Q lcl|Aclame:pro 479 ARTDNISQPWMSPAGYNRGQILNVI---KLAIETRQAQRDRLYQEAINPVTGTGGDGYVLYGDKTAT--SVPSPFDRINV 553 (660) Q Consensus 479 a~~d~~~g~~~span~~~~~v~~~~---~~~~~~~~~e~~~Ln~~gin~i~~~~g~G~~~wG~rT~~--~~~~~~~~i~v 553 (660) ||+|.++||||||+|+++.++.++. .....++++|++.||++|||+|++|+++|+++||+||++ +++++||||+| T Consensus 295 a~~d~~~g~~~span~~~~gv~~~~~~~~~~~~~~~~~~~~L~~~~i~~i~~~~~~G~~~wG~rT~~~~~~~~~~~~i~v 374 (477) T protein:vir:79 295 ARVDLDKGYWWSSSNQQLVGVTGVERPLSAMIDDPQSDVNMLNEQGITTVFSSYGSGLRLWGNRTAAWPTVTHMRNFENV 374 (477) T ss_pred HHhhccCCceEccCCceeecceecccccccccCCChhhHHHHhhCCceEEEEecCCcEEEEcccccCCCCCCccceeeeh Confidence 9999999999999999998887653 345556788999999999999999999999999999995 44467999999 Q ss_pred hHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhcCCeeeEEEEEecCCCCHHHhhCCEEEEEEEEEecC Q lcl|Aclame:pro 554 RRLFNMVKTNIGSASKYRLFELNNAFTRSSFRTETSQYLQGIKALGGVYNFKVVCDTTNNTPAVIDRNEFVATFYLQPAR 633 (660) Q Consensus 554 rR~~~~i~~~~~~~~~~~v~epn~~~~~~~i~~~i~~~l~~l~~~gal~g~~v~~d~~~nt~~~i~~G~~~~~i~~~p~~ 633 (660) ||+++||+++|++.++|+|||||++.+|++|+++|+.||++||++|+|+||+|+||+++||++||++|+|+++|+++|++ T Consensus 375 rR~~~~i~~~~~~~~~~~v~e~~~~~~~~~i~~~i~~~l~~l~~~g~l~g~~v~~~~~~nt~~~i~~G~~~~~i~~~p~~ 454 (477) T protein:vir:79 375 RRTGDVINESLRYFSQQFVDAPIDQGLIDSLVESVNGFGRKLIGDGALLGFKAWFDPARNPKEELAAGHLLINYKYTVPP 454 (477) T ss_pred hhHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeEEEEecCCCCHHHhhCCeEEEEEEEEecC Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred cceEEEEEEEEeecCccHHHHHHhhcC Q lcl|Aclame:pro 634 SINYITLNFVATATGADFDELIGAVGG 660 (660) Q Consensus 634 p~e~i~~~~~~~~~~~~~~e~~~~v~~ 660 (660) |+|||+|+|++.... ++++. +| T Consensus 455 p~e~i~~~~~~~~~~--~~~~~---~~ 476 (477) T protein:vir:79 455 PLERLTYETEITSEY--LLTLK---GG 476 (477) T ss_pred CceeEEEEEEEechH--Hhhhc---cC Confidence 999999999997663 54443 34 No 17 >protein:vir:107865 Length: 477 # NCBI annotation: gp39 # Family: family:all:115 # MgeID: mge:1565 # MgeName: BcepMu # Cross-refs: genbank:acc:YP_024712;genbank:gi:48696949;genbank:GeneID:2845953 Probab=100.00 E-value=1.2e-107 Score=606.85 Aligned_cols=469 Identities=18% Similarity=0.137 Sum_probs=330.1 Q ss_pred Cc-cccCceEEEEe-cCCcccccCCcCceeEEeecccCCCCccEEecCHHHHHHHcCCcCCcchhHHHHHHHHHhcCCEE Q lcl|Aclame:pro 1 MA-LLSPGVELKET-TVQSTVVNNSTGTAALAGKFQWGPAFQIKQITDEVALVDMFGTPNTDTADYFMSAMNFLQYGNDL 78 (660) Q Consensus 1 ~~-~~~PGVyveE~-~~~~~i~gv~Ts~~afvG~~~~Gpv~~p~~i~s~~e~~~~fG~~~~~~~~~~~v~~~f~ngG~~~ 78 (660) |. |++|||||||+ +++++|++|+|+|++|||+|++||+|+|++|+||.|| +.||+...+.++++++++||.|||++| T Consensus 1 M~~~~~pGVyv~E~~~~~~~i~~v~T~v~~~VG~a~~gp~n~pv~its~~d~-~~~g~~~~~~tL~~Av~~~f~nGg~~~ 79 (477) T protein:vir:10 1 MAANYLHGVETIEKETGSRPVKVVKSAVIGLIGTAPIGPVNTPVQSLSDVDA-AQFGPQLAGFTIPQALDAVYDYGSGTV 79 (477) T ss_pred CcccCCCCeEEEEccCCcccccccCCceeEEEecccCCCCCcCEEEccHHHH-HHhccCCCCCcHHHHHHHHHhccceEE Confidence 76 67899999999 4899999999999999999999999999999999999 569999999999999999999999999 Q ss_pred EEEEccCccccccccccccccccccccccccccccceeEEeccccccccccceeeeecCCceeeEEeecccccccccccc Q lcl|Aclame:pro 79 RVVRAVDRDTAKNSSPVAGNINFTISSAGTNYRVGDKVVVKYSTDIIEPDGEVTSVDSDGKILNIFIPSGKIIAKAKEIG 158 (660) Q Consensus 79 ~vvRv~~~~~~~~a~~~~~~l~~t~~~~g~~~~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~a~~~~ 158 (660) |||||.+........... .. ...... .. T Consensus 80 ~vVrV~~~~~~~~~~~~~---------~~------------------------~~~~~~----~~--------------- 107 (477) T protein:vir:10 80 IVINVLDPAVHKSNAANE---------PV------------------------TFDAAT----GR--------------- 107 (477) T ss_pred EEEecCcccccccccccc---------cc------------------------cccccc----ce--------------- Confidence 999997543221110000 00 000000 00 Q ss_pred cccccccceeeeeeccccccceeeeecccccccccccccccccccccccceeeecccccccccccccccccccccccccc Q lcl|Aclame:pro 159 EYPELGSNWTAEMSGSSSGLSAVITIDSVVMDSGILLTEVETSEEAITSLTFQESIKKYGVPGVVALYPGELGDQLEIEI 238 (660) Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~g~~g~~i~v~i 238 (660) ...... +.....+.. T Consensus 108 -----------------------------~~~~~~------------------------------------~~~~~~v~~ 122 (477) T protein:vir:10 108 -----------------------------AKLAHP------------------------------------AAANLVLKN 122 (477) T ss_pred -----------------------------eccccc------------------------------------ccccccccc Confidence 000000 000000000 Q ss_pred cccccccccceeeeeeccccccccccceeeeeccccCcccceeecccCCcccceeEEeeccccccccccccchhhhhhcC Q lcl|Aclame:pro 239 VSKADYDKGASAQLKIYPDGGTRYSTAKAIFGYGPQTDDQYAIIVRRNDSVVQSVVLSTKRGERDIYGSNIFIDDFFAKG 318 (660) Q Consensus 239 ~s~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~e~~~v~~~~~~~~~~~~~~~~~~~~~~g 318 (660) .+ . .. ... .... ......... .......... .+ T Consensus 123 ~a--~--------------~~-------~~~---~~~~--~~~~~~~~~-~~~~~~~~~~------------------~~ 155 (477) T protein:vir:10 123 DS--G--------------GT-------TYA---EGTD--YAVDLINGV-ITRIKTGTIP------------------PG 155 (477) T ss_pred cc--c--------------cc-------ccc---cchh--hhhhhcccc-ceeccccccc------------------cc Confidence 00 0 00 000 0000 000000000 0000000000 00 Q ss_pred CceEEEEEecCCCcccceeeeeeccccccccccchhhhhhhhhhhhhhhcCcc-eeecccccCCchhhHHHHHHHHHHHH Q lcl|Aclame:pro 319 ASNYIFATAQGWPKGFSGVIKLNGGLSSNETVEAGDLMEAWDLFADRESVNAQ-LFIAGSCAGESLEVASTVQKHVVAIG 397 (660) Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~v~~~~~~~~ 397 (660) .....+................+..+.. +...++.+.+..... ...+.....+++++..+|+.+|.++| T Consensus 156 -~~~~~~~~~~~~~~~~~~~~~~g~~~~~---------~~~tGl~al~~~~~~~~~~~~~l~apg~~~~~~v~~~l~~~~ 225 (477) T protein:vir:10 156 -ATAAKATYDYADPTKVTAADIIGAVNAA---------GMRTGMKALKDTYNLYGYFSKILIAPAYCTQNSVSVELEAMA 225 (477) T ss_pred -ceeeeecccccccccccccccccccccc---------chhhhhhhhhhhhhhcchhcccccccccccchhhHHHHHHHH Confidence 0001111111110011111111111110 011122222222211 12344455566777788999999999 Q ss_pred hhccCeEEEeccccceEEecCCCCcHHHHHHHhhhcccccccccccCcceEEEEechhcccccccccceeechHHHHHHH Q lcl|Aclame:pro 398 DSRQDCLVLCSPPRAAVVGIPVNRAVDNLVDWRTASGTYTDNNFNISSTYAAIDGNYKYQYDKYNDVNRWVPLAADIAGL 477 (660) Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~p~~~~~d~~~~~~~~~p~s~~~AG~ 477 (660) ++++ +++++ |+|..++.+++.+|++..... ..+++|+|+++||||++++|+.++..+++|||+++||+ T Consensus 226 ~~~~-~~~~~--------d~p~~~~~~~~~~~~~~~~~~---~~~~~s~~~~~~~p~~~~~d~~~~~~~~~p~s~~~ag~ 293 (477) T protein:vir:10 226 VQLG-AIAYI--------DAPIGTTLAQALAGRGPAGTI---NFNTSSDRVRLCYPHVKVYDTATNAERLEPLSSRAAGL 293 (477) T ss_pred hhCC-EEEEE--------ecCCCCCHHHHHhhhhhcccc---ccccccceEEEEcCeEEEecccCCceeEEchHHHHHHH Confidence 9875 66555 556678889999999876553 34678999999999999999999999999999999999 Q ss_pred HHHhhccCCceecccceeeceeeecc---cccccCChhhhhhhccccceEEEEecCCeEEEecceecCC--CCcccceeh Q lcl|Aclame:pro 478 CARTDNISQPWMSPAGYNRGQILNVI---KLAIETRQAQRDRLYQEAINPVTGTGGDGYVLYGDKTATS--VPSPFDRIN 552 (660) Q Consensus 478 ~a~~d~~~g~~~span~~~~~v~~~~---~~~~~~~~~e~~~Ln~~gin~i~~~~g~G~~~wG~rT~~~--~~~~~~~i~ 552 (660) +||+|.++||||||+|+++.++.++. ...+.+++.|++.||++|||+|++|+++|+++||+||++. +++.|+||+ T Consensus 294 ~a~~d~~~g~~~span~~~~gi~~~~~~~~~~~~~~~~~~~~L~~~gi~~i~~~~~~G~~~wG~rT~~~~~~~~~~~~~~ 373 (477) T protein:vir:10 294 RARVDLDKGYWWSSSNQQLVGVTGVERPLSAMIDDPQSDVNMLNEQGITTVFSSYGSGLRLWGNRTAAWPTVTHMRNFEN 373 (477) T ss_pred HHHhhhcCCceeccCCceeccccccccccccccCCChhhHHHHhhCCceEEEEecCCcEEEEcccccCCCCCCcccceee Confidence 99999999999999999998887763 3455567889999999999999999999999999999953 345799999 Q ss_pred hhHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhcCCeeeEEEEEecCCCCHHHhhCCEEEEEEEEEec Q lcl|Aclame:pro 553 VRRLFNMVKTNIGSASKYRLFELNNAFTRSSFRTETSQYLQGIKALGGVYNFKVVCDTTNNTPAVIDRNEFVATFYLQPA 632 (660) Q Consensus 553 vrR~~~~i~~~~~~~~~~~v~epn~~~~~~~i~~~i~~~l~~l~~~gal~g~~v~~d~~~nt~~~i~~G~~~~~i~~~p~ 632 (660) +|||++||+++|++.++|+|||||++.+|++|+++|++||++||++|+|.||+|+||+++||++||++|+|+++|+++|+ T Consensus 374 vrR~~~~i~~~~~~~~~~~v~~~~~~~~~~~i~~~i~~~l~~l~~~g~l~g~~v~~~~~~nt~~~i~~G~~~~~i~~~p~ 453 (477) T protein:vir:10 374 VRRTGDVINESLRYFSQQFVDAPIDQGLIDSLVESVNGFGRKLIGDGALLGFKAWFDPARNPKEELAAGHLLINYKYTVP 453 (477) T ss_pred hhhHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeEEEEecCCCCHHHhhCCeEEEEEEEEec Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred CcceEEEEEEEEeecCccHHHHHHhh Q lcl|Aclame:pro 633 RSINYITLNFVATATGADFDELIGAV 658 (660) Q Consensus 633 ~p~e~i~~~~~~~~~~~~~~e~~~~v 658 (660) +|||||+|++++... .|+++.+=- T Consensus 454 ~p~e~i~~~~~~~~~--~~~~~~~g~ 477 (477) T protein:vir:10 454 PPLERLTYETEITSE--YLLTLKGGN 477 (477) T ss_pred CCcceEEEEEEEcch--HHhhhhcCC Confidence 999999999999755 455554322 No 18 >protein:vir:98824 Length: 774 # NCBI annotation: putative phage tail sheath protein # Family: family:all:661 # MgeID: mge:1530 # MgeName: Ma-LMM01 # Cross-refs: genbank:acc:YP_851105;genbank:gi:117530262;genbank:GeneID:4484488 Probab=100.00 E-value=7.3e-104 Score=586.01 Aligned_cols=482 Identities=16% Similarity=0.135 Sum_probs=305.7 Q ss_pred CccccCceEEEEe-cCCccccc-CCcCceeEEeecccCCCCccEEecCHHHHHHHcCCcCCcchhHHHHHHHHHhcCCEE Q lcl|Aclame:pro 1 MALLSPGVELKET-TVQSTVVN-NSTGTAALAGKFQWGPAFQIKQITDEVALVDMFGTPNTDTADYFMSAMNFLQYGNDL 78 (660) Q Consensus 1 ~~~~~PGVyveE~-~~~~~i~g-v~Ts~~afvG~~~~Gpv~~p~~i~s~~e~~~~fG~~~~~~~~~~~v~~~f~ngG~~~ 78 (660) -+|-+|||||||+ +++++|+| |+||++||||.++|||+|+|++|+||.||.+.||..... ++|+++| T Consensus 281 ~~v~~~GVYVEEVpSGvrtIeGGV~TSVAAFVG~A~rGPvn~PvlITS~aD~~~~Fg~~~GG-----------l~GassA 349 (774) T protein:vir:98 281 RNVEDNGVVIQLEPALTGSISNRFSFYVTANDNTANRGFTTSPALVTTIPDPAIHFTSFQGG-----------LDGPRSA 349 (774) T ss_pred EEEecCceEEEEeCCCCccccccccceeeeecccccCCCCCcCEEEeehhHhhhhhccccCC-----------cccccee Confidence 6788899999999 58999998 999999999999999999999999999977777644321 2466666 Q ss_pred EEEEccCccccccccccccccccccccccccccccceeEEeccccccccccceeeeecCCceeeEEeecccccccccccc Q lcl|Aclame:pro 79 RVVRAVDRDTAKNSSPVAGNINFTISSAGTNYRVGDKVVVKYSTDIIEPDGEVTSVDSDGKILNIFIPSGKIIAKAKEIG 158 (660) Q Consensus 79 ~vvRv~~~~~~~~a~~~~~~l~~t~~~~g~~~~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~a~~~~ 158 (660) |.+... ....+.+.+++..+| .||+.+++.+ T Consensus 350 ~r~~~~--------~sG~~~L~i~A~~pG---awGN~ItV~I-------------------------------------- 380 (774) T protein:vir:98 350 FRDFYT--------FNGTPLLRLQAVSEG---NWGNQVTVSI-------------------------------------- 380 (774) T ss_pred eeeeee--------ecccceEEEEEeecC---cCCCceEEEE-------------------------------------- Confidence 532110 000011111111111 0111111100 Q ss_pred cccccccceeeeeeccccccceeeeecccccccccccccccccccccccceeeecccccccccccccccccccccccccc Q lcl|Aclame:pro 159 EYPELGSNWTAEMSGSSSGLSAVITIDSVVMDSGILLTEVETSEEAITSLTFQESIKKYGVPGVVALYPGELGDQLEIEI 238 (660) Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~g~~g~~i~v~i 238 (660) . .. . .. ...... ......... ....+....+. T Consensus 381 -------------~-----------------~~-------t--~~-~~~l~v-~~~~~s~f~------~~~a~e~~tv~- 412 (774) T protein:vir:98 381 -------------Y-----------------PV-------N--NS-EFRLNV-QDLNGSAFN------PPLADEVYTVK- 412 (774) T ss_pred -------------E-----------------ec-------C--Cc-eeEEEE-EecCCcccc------ccccceeEEEe- Confidence 0 00 0 00 000000 001100000 00000000000 Q ss_pred cccccccccceeeeeeccccccccccceeeeeccccCcccceeecccCCcc-cceeEEeeccccccccccccchhhhhhc Q lcl|Aclame:pro 239 VSKADYDKGASAQLKIYPDGGTRYSTAKAIFGYGPQTDDQYAIIVRRNDSV-VQSVVLSTKRGERDIYGSNIFIDDFFAK 317 (660) Q Consensus 239 ~s~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~-~e~~~v~~~~~~~~~~~~~~~~~~~~~~ 317 (660) ............ .................-.-...... .+.+............. T Consensus 413 -~~~~~~~~~v~e------------~~dn~~i~~~~~~~~~~~in~vs~lv~~~~~~~a~~d~~~~~~~----------- 468 (774) T protein:vir:98 413 -LGDTNESGELNA------------LLDSKFIRGFFLPKSIDSINYDAALVRQSPLRLAPPDESETDVE----------- 468 (774) T ss_pred -cccccccceeee------------eeceeeEeecccccccccccccccccccchhccccccccccccc----------- Confidence 000000000000 00000000000000000000000000 00000000000000000 Q ss_pred CCceEEEEEecCCCcccceeeeeeccccccccccchhhhhhhhhhhhhhhcCcceeecccccCCchhhHHHHHHHHHHHH Q lcl|Aclame:pro 318 GASNYIFATAQGWPKGFSGVIKLNGGLSSNETVEAGDLMEAWDLFADRESVNAQLFIAGSCAGESLEVASTVQKHVVAIG 397 (660) Q Consensus 318 g~~~~~~~~~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 397 (660) ...............+++.+|.++... +..++.++.+.. +...+.++..+. ....++.+|+.|| T Consensus 469 -----~~~~~~~~~~~~~v~v~lagG~Dg~~t-t~~~igg~~~~~---~~tgi~aLl~a~-------~~~~V~~aii~~~ 532 (774) T protein:vir:98 469 -----NPAHVDFYGPNVLVDVTLENGYDGPPV-TNDDYVSIIRTL---ENQPVHILLVGT-------TNVGVQQALITEA 532 (774) T ss_pred -----ccccccccCCcceEEEeecCCCCcccc-cchheecccccc---cccceeEEEcCc-------cchhhHHHHHHHH Confidence 000000111112233456777766442 333343333222 222333333221 1234666777777 Q ss_pred hhc----cCeEEEeccccceEEecCCCCcHHHHHHHhhhcccccccccccCcceEEEEechhcccccccccceeechHHH Q lcl|Aclame:pro 398 DSR----QDCLVLCSPPRAAVVGIPVNRAVDNLVDWRTASGTYTDNNFNISSTYAAIDGNYKYQYDKYNDVNRWVPLAAD 473 (660) Q Consensus 398 ~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~p~~~~~d~~~~~~~~~p~s~~ 473 (660) +.+ ++|+++ +|.|++.+.+++++||+. ++|+|+++||||++++|+.++..+++|||++ T Consensus 533 e~~~~~~~~r~av--------id~p~g~t~~~Ai~~r~~----------f~S~~aal~~Pwvkv~D~~~g~~~~vPpSg~ 594 (774) T protein:vir:98 533 ERASDSDGLRIAV--------LAAPPRTTPTLAASVTRG----------FNSTRAVMVAGWFTYAGQPNSSRYGVPGAAV 594 (774) T ss_pred HHhhhcccceEEE--------EECCCCCCHHHHHHHHhc----------cCCceEEEEeCcEEEeccCCCceeecChhHH Confidence 665 555555 456678899999999974 7799999999999999999999999999999 Q ss_pred HHHHHHHhhccCCceecccceeeceeeecc---cccccCChhhhhhhccccceEEE-EecCCeEEEecceecCCCCcccc Q lcl|Aclame:pro 474 IAGLCARTDNISQPWMSPAGYNRGQILNVI---KLAIETRQAQRDRLYQEAINPVT-GTGGDGYVLYGDKTATSVPSPFD 549 (660) Q Consensus 474 ~AG~~a~~d~~~g~~~span~~~~~v~~~~---~~~~~~~~~e~~~Ln~~gin~i~-~~~g~G~~~wG~rT~~~~~~~~~ 549 (660) +||++||+| +||||+|+++.|+.+.. ......++.|++.||+++||+++ .++++|+++||+||+++|+ +|| T Consensus 595 vAGl~ArtD----v~kSPANk~I~Givg~ai~~~l~~~~t~ae~d~Ln~~gIN~i~itt~g~G~rvWG~RTlssDp-~wr 669 (774) T protein:vir:98 595 YAGKLAAID----FFVSPAARSLVGPLFNIIESDTDNYTSRSNQDIYSAARLEVLSLDTVDRTYRFASGVTLSTDP-AWE 669 (774) T ss_pred HHHHHHhcC----cccccCCceeecceeccccccccccccchhhhhhcccccceeEEEEcCCcEEEEcccccCCCc-ccc Confidence 999999999 99999999988877642 23455678899999999999998 6889999999999998775 799 Q ss_pred eehhhHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhcCCeeeEE-EEEecCCCCHHHhhCCEEEEEEE Q lcl|Aclame:pro 550 RINVRRLFNMVKTNIGSASKYRLFELNNAFTRSSFRTETSQYLQGIKALGGVYNFK-VVCDTTNNTPAVIDRNEFVATFY 628 (660) Q Consensus 550 ~i~vrR~~~~i~~~~~~~~~~~v~epn~~~~~~~i~~~i~~~l~~l~~~gal~g~~-v~~d~~~nt~~~i~~G~~~~~i~ 628 (660) ||++|||++||+++|++.++|+||||||+.+|++|+++++.||++||++|+|.||+ |+||+++||+++|++|+|+++|+ T Consensus 670 ~InVRRlfd~Ie~SI~~~~~~~VfEPNd~~l~~~I~~sI~~fL~~L~~~GaL~G~~~V~~D~etNt~~dI~~G~l~i~I~ 749 (774) T protein:vir:98 670 RIYLRRVHDVVRQGAHAILRNYVAMPNSRLVRNQIAAALNAFMGELKRNGNIVSFRPAIIDGSNNSTAAYFSRELYVSLQ 749 (774) T ss_pred eEeehhhHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCceecceEEEEcCCCCCHHHhhCCEEEEEEE Confidence 99999999999999999999999999999999999999999999999999999997 89999999999999999999999 Q ss_pred EEecCcceEEEEEEEEeecCccHHH Q lcl|Aclame:pro 629 LQPARSINYITLNFVATATGADFDE 653 (660) Q Consensus 629 ~~p~~p~e~i~~~~~~~~~~~~~~e 653 (660) ++|++|||||+|||+|+.+..+|+| T Consensus 750 vaP~~PAEfIilri~q~t~~~~l~E 774 (774) T protein:vir:98 750 FQPLYSADYIYVTISRDTETSPLGE 774 (774) T ss_pred EEecCCcceEEEEEEEeecceeccC Confidence 9999999999999999999999999 No 19 >protein:vir:79181 Length: 390 # NCBI annotation: gp30, phage tail sheath protein # Family: family:all:115 # MgeID: mge:1866 # MgeName: phiE202 # Cross-refs: genbank:acc:YP_001111061;genbank:gi:134288772;genbank:GeneID:4960700 Probab=100.00 E-value=6.5e-96 Score=542.42 Aligned_cols=380 Identities=16% Similarity=0.148 Sum_probs=305.3 Q ss_pred CccccCceEEEEe-cCCcccccCCcCceeEEeecccC-----CCCccEEecCHHHHHHHcCCcCCcchhHHHHHHHHHhc Q lcl|Aclame:pro 1 MALLSPGVELKET-TVQSTVVNNSTGTAALAGKFQWG-----PAFQIKQITDEVALVDMFGTPNTDTADYFMSAMNFLQY 74 (660) Q Consensus 1 ~~~~~PGVyveE~-~~~~~i~gv~Ts~~afvG~~~~G-----pv~~p~~i~s~~e~~~~fG~~~~~~~~~~~v~~~f~ng 74 (660) ++|.+|||||+|+ +++++|..++|++.+|+|++.++ |+|+|++|+|+.+|.+.||. ..++++++..||.|| T Consensus 2 ~~~~~~Gv~v~e~~~~~~~i~~~~tav~~~vg~a~dad~~~~p~n~pv~its~~~~~~~~g~---~~tL~~al~~~~~~~ 78 (390) T protein:vir:79 2 PQDYHHGVRVIEINEGGRPIRSVSTAVLGVVCTAADADASAFPLNTPVLLTNVVAALGKAGK---KGTLRRTLDAIGKQT 78 (390) T ss_pred ccccCCCeEEEEcCCCcccccccCCceeEEEEecCCCCccccccccceEeecHHHHHHhcCC---Cccchhhhhhhcccc Confidence 8899999999999 58999999999999999999987 89999999999999999985 456788999999999 Q ss_pred CCEEEEEEccCccccccccccccccccccccccccccccceeEEeccccccccccceeeeecCCceeeEEeecccccccc Q lcl|Aclame:pro 75 GNDLRVVRAVDRDTAKNSSPVAGNINFTISSAGTNYRVGDKVVVKYSTDIIEPDGEVTSVDSDGKILNIFIPSGKIIAKA 154 (660) Q Consensus 75 G~~~~vvRv~~~~~~~~a~~~~~~l~~t~~~~g~~~~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~a 154 (660) |+.||+||+..+....... ... T Consensus 79 ~~~~~vv~v~~~~~~~~~~-----------------------------------------------~~~----------- 100 (390) T protein:vir:79 79 KPLTVVVRVAEGKDADETT-----------------------------------------------SNV----------- 100 (390) T ss_pred cceEEEEeecccccccccc-----------------------------------------------cee----------- Confidence 9999999985422100000 000 Q ss_pred cccccccccccceeeeeeccccccceeeeecccccccccccccccccccccccceeeecccccccccccccccccccccc Q lcl|Aclame:pro 155 KEIGEYPELGSNWTAEMSGSSSGLSAVITIDSVVMDSGILLTEVETSEEAITSLTFQESIKKYGVPGVVALYPGELGDQL 234 (660) Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~g~~g~~i 234 (660) ++. ... ....+ +..+ + T Consensus 101 -----------------------------ig~-~~~-----------~~~~t--------------gl~a---------l 116 (390) T protein:vir:79 101 -----------------------------IGT-VTP-----------DGKYT--------------GIKA---------L 116 (390) T ss_pred -----------------------------eec-ccc-----------cccch--------------hhhh---------h Confidence 000 000 00000 0000 0 Q ss_pred cccccccccccccceeeeeeccccccccccceeeeeccccCcccceeecccCCcccceeEEeeccccccccccccchhhh Q lcl|Aclame:pro 235 EIEIVSKADYDKGASAQLKIYPDGGTRYSTAKAIFGYGPQTDDQYAIIVRRNDSVVQSVVLSTKRGERDIYGSNIFIDDF 314 (660) Q Consensus 235 ~v~i~s~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~e~~~v~~~~~~~~~~~~~~~~~~~ 314 (660) . +. .. T Consensus 117 -------------------------------------------------~------~~---------~~----------- 121 (390) T protein:vir:79 117 -------------------------------------------------L------AA---------QG----------- 121 (390) T ss_pred -------------------------------------------------h------hh---------hh----------- Confidence 0 00 00 Q ss_pred hhcCCceEEEEEecCCCcccceeeeeeccccccccccchhhhhhhhhhhhhhhcCcceeecccccCCchhhHHHHHHHHH Q lcl|Aclame:pro 315 FAKGASNYIFATAQGWPKGFSGVIKLNGGLSSNETVEAGDLMEAWDLFADRESVNAQLFIAGSCAGESLEVASTVQKHVV 394 (660) Q Consensus 315 ~~~g~~~~~~~~~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 394 (660) ..+ +.+.++ .++..+ ..+++.+|. T Consensus 122 -~~~-------------------------------------------------~~p~il-----~ap~~~-~~~v~~~l~ 145 (390) T protein:vir:79 122 -ALG-------------------------------------------------VKPRIL-----AAPGLD-TQPVAAALA 145 (390) T ss_pred -hhc-------------------------------------------------cccccc-----cCCccc-chHHHHHHH Confidence 000 000000 001111 134778889 Q ss_pred HHHhhccCeEEEeccccceEEecCCCCcHHHHHHHhhhcccccccccccCcceEEEEechhcccccccccceeechHHHH Q lcl|Aclame:pro 395 AIGDSRQDCLVLCSPPRAAVVGIPVNRAVDNLVDWRTASGTYTDNNFNISSTYAAIDGNYKYQYDKYNDVNRWVPLAADI 474 (660) Q Consensus 395 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~p~~~~~d~~~~~~~~~p~s~~~ 474 (660) .+|++++ +++++ |.|.+.+.+++.+||+. ++|.|+++||||++++|+.++..+++|||+++ T Consensus 146 ~~a~~~~-~~ai~--------D~p~~~t~~~a~~~~~~----------~~s~~~~~~~p~~~~~d~~~~~~~~~p~s~~~ 206 (390) T protein:vir:79 146 ATAQSLR-AMAYV--------SASGCKTKEEAAAYRRQ----------FGQREIMVIWPDWLGWDDTTNSTAVIPAPAIA 206 (390) T ss_pred Hhhhhcc-eEEEE--------EccCCCCHHHHHHHhcC----------CCCceEEEEcCceeecccccCceeEeehHHHH Confidence 9999875 56555 55667889999999864 77999999999999999999999999999999 Q ss_pred HHHHHHhhccCCceecccceeeceeeecc---cccccCChhhhhhhccccceEEEEecCCeEEEecceecCCCCccccee Q lcl|Aclame:pro 475 AGLCARTDNISQPWMSPAGYNRGQILNVI---KLAIETRQAQRDRLYQEAINPVTGTGGDGYVLYGDKTATSVPSPFDRI 551 (660) Q Consensus 475 AG~~a~~d~~~g~~~span~~~~~v~~~~---~~~~~~~~~e~~~Ln~~gin~i~~~~g~G~~~wG~rT~~~~~~~~~~i 551 (660) ||++||+|.++|||+||+|+++.++.++. .........|++.||++||++++ +++|+++||+||+++|+ .|+|| T Consensus 207 Ag~~a~~D~~~g~~~spsN~~i~gi~~~~~~~~~~~~~~~~~a~~Ln~~gi~t~~--~~~G~~~wG~rT~~~d~-~~~~i 283 (390) T protein:vir:79 207 AGLRAKIDNDIGWHKTISNVVVNGVSGISADVSWDLQDPATDAGYLNEHEVTTLV--NRNGFRFWGERTCSDDP-KFAFE 283 (390) T ss_pred HHHHHhhhccCCcEEccCCceeeccceeeeeccccccccchhhhhhhhcCcEEEE--cCCCEEEEeccccCCCc-cccee Confidence 99999999999999999999988777653 23344566788999999999985 46899999999998775 79999 Q ss_pred hhhHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhcCCeeeEEEEEecCCCCHHHhhCCEEEEEEEEEe Q lcl|Aclame:pro 552 NVRRLFNMVKTNIGSASKYRLFELNNAFTRSSFRTETSQYLQGIKALGGVYNFKVVCDTTNNTPAVIDRNEFVATFYLQP 631 (660) Q Consensus 552 ~vrR~~~~i~~~~~~~~~~~v~epn~~~~~~~i~~~i~~~l~~l~~~gal~g~~v~~d~~~nt~~~i~~G~~~~~i~~~p 631 (660) ++|||++||+++|++.++|+|||||++.+|++|+++++.||++||++|+|.||+|+||+++||+++|++|+|+++|+++| T Consensus 284 ~vrR~~~~i~~~i~~~~~~~v~e~~~~~~~~~i~~~i~~~L~~l~~~gal~g~~v~~d~~~nt~~~i~~G~~~~~i~~~p 363 (390) T protein:vir:79 284 NYTRTAQVAADSIAEAQMPVVDGPLNPSLARDIVESINGWFRQQVANGYLIGGSAWIDPEPNTADILASGKAYIDYDYTP 363 (390) T ss_pred eehhhHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeEEEEecCCCCHHHhhCCEEEEEEEEEe Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred cCcceEEEEEEEEeecCccHHHHHHhhcC Q lcl|Aclame:pro 632 ARSINYITLNFVATATGADFDELIGAVGG 660 (660) Q Consensus 632 ~~p~e~i~~~~~~~~~~~~~~e~~~~v~~ 660 (660) ++|+|||+|++..+.. +++++++.|++ T Consensus 364 ~~p~e~i~~~~~~~~~--~~~~~~~~v~~ 390 (390) T protein:vir:79 364 VPPLENLVLRQRITDR--FLADFPARVAG 390 (390) T ss_pred cCCcceEEEEEEEchH--HHHHHHHHhcC Confidence 9999999999998655 68999999999 No 20 >protein:vir:103993 Length: 390 # NCBI annotation: phage tail sheath protein # Family: family:all:115 # MgeID: mge:1665 # MgeName: phi52237 # Cross-refs: genbank:acc:YP_293729;genbank:gi:72537699;genbank:GeneID:3608123 Probab=100.00 E-value=8.5e-96 Score=541.78 Aligned_cols=380 Identities=16% Similarity=0.120 Sum_probs=306.9 Q ss_pred CccccCceEEEEe-cCCcccccCCcCceeEEeecccC-----CCCccEEecCHHHHHHHcCCcCCcchhHHHHHHHHHhc Q lcl|Aclame:pro 1 MALLSPGVELKET-TVQSTVVNNSTGTAALAGKFQWG-----PAFQIKQITDEVALVDMFGTPNTDTADYFMSAMNFLQY 74 (660) Q Consensus 1 ~~~~~PGVyveE~-~~~~~i~gv~Ts~~afvG~~~~G-----pv~~p~~i~s~~e~~~~fG~~~~~~~~~~~v~~~f~ng 74 (660) ++|.+|||||+|+ +++++|..++|++.+|||+++++ |+++|++|+|+.+|...||. +.++++++..||.|| T Consensus 2 ~~~~~~Gv~v~e~~~g~~~i~~~~tav~g~vg~a~~ad~~~~pln~pv~i~s~~~~~~~~g~---~gtL~~al~~~~~~g 78 (390) T protein:vir:10 2 PQDYHHGVRVIEINEGGRPIRSVSTAVLGVVCTAADADASAFPLNTPVLLTNVVAALGKAGK---KGTLRRTLDAIGKQT 78 (390) T ss_pred cccccCCeEEEEcCCCcccccccCcceeEEEEcccCcCccccccccceEeccHHHHHhhcCC---Cceehhhhhhhcccc Confidence 7788999999999 58999999999999999999876 99999999999999999995 567899999999999 Q ss_pred CCEEEEEEccCccccccccccccccccccccccccccccceeEEeccccccccccceeeeecCCceeeEEeecccccccc Q lcl|Aclame:pro 75 GNDLRVVRAVDRDTAKNSSPVAGNINFTISSAGTNYRVGDKVVVKYSTDIIEPDGEVTSVDSDGKILNIFIPSGKIIAKA 154 (660) Q Consensus 75 G~~~~vvRv~~~~~~~~a~~~~~~l~~t~~~~g~~~~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~a 154 (660) |..||+||+.+.+........ + + + T Consensus 79 g~~~~vv~v~~~~~~~~~~~~-----------------------------------~--i---g---------------- 102 (390) T protein:vir:10 79 KPLTVVVRVAEGKDADETTSN-----------------------------------V--I---G---------------- 102 (390) T ss_pred CceEEEEEecccccccccccc-----------------------------------c--c---c---------------- Confidence 999999998543211100000 0 0 0 Q ss_pred cccccccccccceeeeeeccccccceeeeecccccccccccccccccccccccceeeecccccccccccccccccccccc Q lcl|Aclame:pro 155 KEIGEYPELGSNWTAEMSGSSSGLSAVITIDSVVMDSGILLTEVETSEEAITSLTFQESIKKYGVPGVVALYPGELGDQL 234 (660) Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~g~~g~~i 234 (660) ... .. ...++ ..+ + T Consensus 103 ----~~~----------------------------~~-----------~~~tg--------------~~a---------l 116 (390) T protein:vir:10 103 ----TVT----------------------------PD-----------GKYTG--------------IKA---------L 116 (390) T ss_pred ----ccc----------------------------cc-----------cccch--------------hhh---------h Confidence 000 00 00000 000 0 Q ss_pred cccccccccccccceeeeeeccccccccccceeeeeccccCcccceeecccCCcccceeEEeeccccccccccccchhhh Q lcl|Aclame:pro 235 EIEIVSKADYDKGASAQLKIYPDGGTRYSTAKAIFGYGPQTDDQYAIIVRRNDSVVQSVVLSTKRGERDIYGSNIFIDDF 314 (660) Q Consensus 235 ~v~i~s~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~e~~~v~~~~~~~~~~~~~~~~~~~ 314 (660) . ... T Consensus 117 ~--------------------------------------~~~-------------------------------------- 120 (390) T protein:vir:10 117 L--------------------------------------AAQ-------------------------------------- 120 (390) T ss_pred h--------------------------------------hhh-------------------------------------- Confidence 0 000 Q ss_pred hhcCCceEEEEEecCCCcccceeeeeeccccccccccchhhhhhhhhhhhhhhcCcceeecccccCCchhhHHHHHHHHH Q lcl|Aclame:pro 315 FAKGASNYIFATAQGWPKGFSGVIKLNGGLSSNETVEAGDLMEAWDLFADRESVNAQLFIAGSCAGESLEVASTVQKHVV 394 (660) Q Consensus 315 ~~~g~~~~~~~~~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 394 (660) ...+ ..+....++.++ ..+++.+|. T Consensus 121 ~~~~------------------------------------------------------~~p~il~ap~~~-~~~v~~~l~ 145 (390) T protein:vir:10 121 GALG------------------------------------------------------VKPRILAAPGLD-TQPVAAALA 145 (390) T ss_pred hhhc------------------------------------------------------ceehhhcccccc-hHHHHHHHH Confidence 0000 000000001111 134788899 Q ss_pred HHHhhccCeEEEeccccceEEecCCCCcHHHHHHHhhhcccccccccccCcceEEEEechhcccccccccceeechHHHH Q lcl|Aclame:pro 395 AIGDSRQDCLVLCSPPRAAVVGIPVNRAVDNLVDWRTASGTYTDNNFNISSTYAAIDGNYKYQYDKYNDVNRWVPLAADI 474 (660) Q Consensus 395 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~p~~~~~d~~~~~~~~~p~s~~~ 474 (660) .+|++++ ++++ +|.|.+.+.+++.+||+. ++|+|+++||||++++|+.++..+++|||+++ T Consensus 146 ~~a~~~~-~~ai--------vD~p~~~t~~~a~~~~~~----------~~s~~~~~~~p~~~~~d~~~~~~~~~p~s~~~ 206 (390) T protein:vir:10 146 ATAQSLR-AMAY--------VSASGCKTKEEAAAYRKQ----------FGQREIMVIWPDWLGWDDTTNSTAVIPAPAIA 206 (390) T ss_pred Hhhcccc-eEEE--------EecCCCCCHHHHHHHhhc----------cCCceEEEEcCceEeecccCCcccccchHHHH Confidence 9999886 4544 456677899999999874 67899999999999999999999999999999 Q ss_pred HHHHHHhhccCCceecccceeeceeeecc---cccccCChhhhhhhccccceEEEEecCCeEEEecceecCCCCccccee Q lcl|Aclame:pro 475 AGLCARTDNISQPWMSPAGYNRGQILNVI---KLAIETRQAQRDRLYQEAINPVTGTGGDGYVLYGDKTATSVPSPFDRI 551 (660) Q Consensus 475 AG~~a~~d~~~g~~~span~~~~~v~~~~---~~~~~~~~~e~~~Ln~~gin~i~~~~g~G~~~wG~rT~~~~~~~~~~i 551 (660) ||++||+|.++||||||+|+.+.++.++. .........|.+.||++||+++++ ++|+++||+||+++|+ +|||| T Consensus 207 Agl~a~~D~~~g~~~spaN~~l~gi~~~~~~~~~~~~~~~~~~~~ln~~gi~t~~~--~~G~~~wG~rT~s~d~-~~~~i 283 (390) T protein:vir:10 207 AGLRAKIDNDIGWHKTISNVVVNGVSGISADVSWDLQDPATDAGYLNEHEVTTLVN--RNGFRFWGERTCSDDP-KFAFE 283 (390) T ss_pred HHHHHHhhcCCCcEECcCCceeeceeecceecccccccccchhhhhhhcCcEEEEc--CCCEEEEcccccCCCc-cccee Confidence 99999999999999999999998887753 334555677889999999999964 6799999999998765 79999 Q ss_pred hhhHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhcCCeeeEEEEEecCCCCHHHhhCCEEEEEEEEEe Q lcl|Aclame:pro 552 NVRRLFNMVKTNIGSASKYRLFELNNAFTRSSFRTETSQYLQGIKALGGVYNFKVVCDTTNNTPAVIDRNEFVATFYLQP 631 (660) Q Consensus 552 ~vrR~~~~i~~~~~~~~~~~v~epn~~~~~~~i~~~i~~~l~~l~~~gal~g~~v~~d~~~nt~~~i~~G~~~~~i~~~p 631 (660) ++|||++||+++|++.++|+|||||++.+|++|++++++||++||++|+|.||+|+||+++||++||++|+|+++|+++| T Consensus 284 ~~rR~~~~i~~~i~~~~~~~v~e~n~~~~~~~i~~~i~~~L~~l~~~g~l~g~~v~~d~~~nt~~~i~~G~~~~~v~~~p 363 (390) T protein:vir:10 284 NYTRTAQVAGDSIAEAQMPVVDGPLNPSLARDIVESINGWFRQQVANGYLIGGSAWIDPEPNTADILASGKAYIDYDYTP 363 (390) T ss_pred ehhhHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeEEEEccCCCCHHHhhCCeEEEEEEEEe Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred cCcceEEEEEEEEeecCccHHHHHHhhcC Q lcl|Aclame:pro 632 ARSINYITLNFVATATGADFDELIGAVGG 660 (660) Q Consensus 632 ~~p~e~i~~~~~~~~~~~~~~e~~~~v~~ 660 (660) ++|+|||+|+++++.. +++++++.|+. T Consensus 364 ~~pae~I~~~~~~~~~--~~~~~~~~~~~ 390 (390) T protein:vir:10 364 VPPLENLVLRQRITDR--FLADFPARVAG 390 (390) T ss_pred cCCcceEEEEEEEchH--HHHHHHHHhcC Confidence 9999999999998755 79999999999 No 21 >protein:vir:78206 Length: 390 # NCBI annotation: gp33, phage tail sheath protein # Family: family:all:115 # MgeID: mge:1848 # MgeName: phiE12-2 # Cross-refs: genbank:acc:YP_001111183;genbank:gi:134288694;genbank:GeneID:4960666 Probab=100.00 E-value=8.5e-96 Score=541.78 Aligned_cols=380 Identities=16% Similarity=0.120 Sum_probs=306.9 Q ss_pred CccccCceEEEEe-cCCcccccCCcCceeEEeecccC-----CCCccEEecCHHHHHHHcCCcCCcchhHHHHHHHHHhc Q lcl|Aclame:pro 1 MALLSPGVELKET-TVQSTVVNNSTGTAALAGKFQWG-----PAFQIKQITDEVALVDMFGTPNTDTADYFMSAMNFLQY 74 (660) Q Consensus 1 ~~~~~PGVyveE~-~~~~~i~gv~Ts~~afvG~~~~G-----pv~~p~~i~s~~e~~~~fG~~~~~~~~~~~v~~~f~ng 74 (660) ++|.+|||||+|+ +++++|..++|++.+|||+++++ |+++|++|+|+.+|...||. +.++++++..||.|| T Consensus 2 ~~~~~~Gv~v~e~~~g~~~i~~~~tav~g~vg~a~~ad~~~~pln~pv~i~s~~~~~~~~g~---~gtL~~al~~~~~~g 78 (390) T protein:vir:78 2 PQDYHHGVRVIEINEGGRPIRSVSTAVLGVVCTAADADASAFPLNTPVLLTNVVAALGKAGK---KGTLRRTLDAIGKQT 78 (390) T ss_pred cccccCCeEEEEcCCCcccccccCcceeEEEEcccCcCccccccccceEeccHHHHHhhcCC---Cceehhhhhhhcccc Confidence 7788999999999 58999999999999999999876 99999999999999999995 567899999999999 Q ss_pred CCEEEEEEccCccccccccccccccccccccccccccccceeEEeccccccccccceeeeecCCceeeEEeecccccccc Q lcl|Aclame:pro 75 GNDLRVVRAVDRDTAKNSSPVAGNINFTISSAGTNYRVGDKVVVKYSTDIIEPDGEVTSVDSDGKILNIFIPSGKIIAKA 154 (660) Q Consensus 75 G~~~~vvRv~~~~~~~~a~~~~~~l~~t~~~~g~~~~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~a 154 (660) |..||+||+.+.+........ + + + T Consensus 79 g~~~~vv~v~~~~~~~~~~~~-----------------------------------~--i---g---------------- 102 (390) T protein:vir:78 79 KPLTVVVRVAEGKDADETTSN-----------------------------------V--I---G---------------- 102 (390) T ss_pred CceEEEEEecccccccccccc-----------------------------------c--c---c---------------- Confidence 999999998543211100000 0 0 0 Q ss_pred cccccccccccceeeeeeccccccceeeeecccccccccccccccccccccccceeeecccccccccccccccccccccc Q lcl|Aclame:pro 155 KEIGEYPELGSNWTAEMSGSSSGLSAVITIDSVVMDSGILLTEVETSEEAITSLTFQESIKKYGVPGVVALYPGELGDQL 234 (660) Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~g~~g~~i 234 (660) ... .. ...++ ..+ + T Consensus 103 ----~~~----------------------------~~-----------~~~tg--------------~~a---------l 116 (390) T protein:vir:78 103 ----TVT----------------------------PD-----------GKYTG--------------IKA---------L 116 (390) T ss_pred ----ccc----------------------------cc-----------cccch--------------hhh---------h Confidence 000 00 00000 000 0 Q ss_pred cccccccccccccceeeeeeccccccccccceeeeeccccCcccceeecccCCcccceeEEeeccccccccccccchhhh Q lcl|Aclame:pro 235 EIEIVSKADYDKGASAQLKIYPDGGTRYSTAKAIFGYGPQTDDQYAIIVRRNDSVVQSVVLSTKRGERDIYGSNIFIDDF 314 (660) Q Consensus 235 ~v~i~s~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~e~~~v~~~~~~~~~~~~~~~~~~~ 314 (660) . ... T Consensus 117 ~--------------------------------------~~~-------------------------------------- 120 (390) T protein:vir:78 117 L--------------------------------------AAQ-------------------------------------- 120 (390) T ss_pred h--------------------------------------hhh-------------------------------------- Confidence 0 000 Q ss_pred hhcCCceEEEEEecCCCcccceeeeeeccccccccccchhhhhhhhhhhhhhhcCcceeecccccCCchhhHHHHHHHHH Q lcl|Aclame:pro 315 FAKGASNYIFATAQGWPKGFSGVIKLNGGLSSNETVEAGDLMEAWDLFADRESVNAQLFIAGSCAGESLEVASTVQKHVV 394 (660) Q Consensus 315 ~~~g~~~~~~~~~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 394 (660) ...+ ..+....++.++ ..+++.+|. T Consensus 121 ~~~~------------------------------------------------------~~p~il~ap~~~-~~~v~~~l~ 145 (390) T protein:vir:78 121 GALG------------------------------------------------------VKPRILAAPGLD-TQPVAAALA 145 (390) T ss_pred hhhc------------------------------------------------------ceehhhcccccc-hHHHHHHHH Confidence 0000 000000001111 134788899 Q ss_pred HHHhhccCeEEEeccccceEEecCCCCcHHHHHHHhhhcccccccccccCcceEEEEechhcccccccccceeechHHHH Q lcl|Aclame:pro 395 AIGDSRQDCLVLCSPPRAAVVGIPVNRAVDNLVDWRTASGTYTDNNFNISSTYAAIDGNYKYQYDKYNDVNRWVPLAADI 474 (660) Q Consensus 395 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~p~~~~~d~~~~~~~~~p~s~~~ 474 (660) .+|++++ ++++ +|.|.+.+.+++.+||+. ++|+|+++||||++++|+.++..+++|||+++ T Consensus 146 ~~a~~~~-~~ai--------vD~p~~~t~~~a~~~~~~----------~~s~~~~~~~p~~~~~d~~~~~~~~~p~s~~~ 206 (390) T protein:vir:78 146 ATAQSLR-AMAY--------VSASGCKTKEEAAAYRKQ----------FGQREIMVIWPDWLGWDDTTNSTAVIPAPAIA 206 (390) T ss_pred Hhhcccc-eEEE--------EecCCCCCHHHHHHHhhc----------cCCceEEEEcCceEeecccCCcccccchHHHH Confidence 9999886 4544 456677899999999874 67899999999999999999999999999999 Q ss_pred HHHHHHhhccCCceecccceeeceeeecc---cccccCChhhhhhhccccceEEEEecCCeEEEecceecCCCCccccee Q lcl|Aclame:pro 475 AGLCARTDNISQPWMSPAGYNRGQILNVI---KLAIETRQAQRDRLYQEAINPVTGTGGDGYVLYGDKTATSVPSPFDRI 551 (660) Q Consensus 475 AG~~a~~d~~~g~~~span~~~~~v~~~~---~~~~~~~~~e~~~Ln~~gin~i~~~~g~G~~~wG~rT~~~~~~~~~~i 551 (660) ||++||+|.++||||||+|+.+.++.++. .........|.+.||++||+++++ ++|+++||+||+++|+ +|||| T Consensus 207 Agl~a~~D~~~g~~~spaN~~l~gi~~~~~~~~~~~~~~~~~~~~ln~~gi~t~~~--~~G~~~wG~rT~s~d~-~~~~i 283 (390) T protein:vir:78 207 AGLRAKIDNDIGWHKTISNVVVNGVSGISADVSWDLQDPATDAGYLNEHEVTTLVN--RNGFRFWGERTCSDDP-KFAFE 283 (390) T ss_pred HHHHHHhhcCCCcEECcCCceeeceeecceecccccccccchhhhhhhcCcEEEEc--CCCEEEEcccccCCCc-cccee Confidence 99999999999999999999998887753 334555677889999999999964 6799999999998765 79999 Q ss_pred hhhHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhcCCeeeEEEEEecCCCCHHHhhCCEEEEEEEEEe Q lcl|Aclame:pro 552 NVRRLFNMVKTNIGSASKYRLFELNNAFTRSSFRTETSQYLQGIKALGGVYNFKVVCDTTNNTPAVIDRNEFVATFYLQP 631 (660) Q Consensus 552 ~vrR~~~~i~~~~~~~~~~~v~epn~~~~~~~i~~~i~~~l~~l~~~gal~g~~v~~d~~~nt~~~i~~G~~~~~i~~~p 631 (660) ++|||++||+++|++.++|+|||||++.+|++|++++++||++||++|+|.||+|+||+++||++||++|+|+++|+++| T Consensus 284 ~~rR~~~~i~~~i~~~~~~~v~e~n~~~~~~~i~~~i~~~L~~l~~~g~l~g~~v~~d~~~nt~~~i~~G~~~~~v~~~p 363 (390) T protein:vir:78 284 NYTRTAQVAGDSIAEAQMPVVDGPLNPSLARDIVESINGWFRQQVANGYLIGGSAWIDPEPNTADILASGKAYIDYDYTP 363 (390) T ss_pred ehhhHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeEEEEccCCCCHHHhhCCeEEEEEEEEe Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred cCcceEEEEEEEEeecCccHHHHHHhhcC Q lcl|Aclame:pro 632 ARSINYITLNFVATATGADFDELIGAVGG 660 (660) Q Consensus 632 ~~p~e~i~~~~~~~~~~~~~~e~~~~v~~ 660 (660) ++|+|||+|+++++.. +++++++.|+. T Consensus 364 ~~pae~I~~~~~~~~~--~~~~~~~~~~~ 390 (390) T protein:vir:78 364 VPPLENLVLRQRITDR--FLADFPARVAG 390 (390) T ss_pred cCCcceEEEEEEEchH--HHHHHHHHhcC Confidence 9999999999998755 79999999999 No 22 >protein:vir:5711 Length: 396 # NCBI annotation: gpFI # Family: family:all:115 # MgeID: mge:120 # MgeName: L-413C # Cross-refs: genbank:acc:NP_839870;genbank:gi:30065725;genbank:GeneID:1260618 Probab=100.00 E-value=4.6e-95 Score=537.78 Aligned_cols=386 Identities=13% Similarity=0.109 Sum_probs=307.4 Q ss_pred CccccCceEEEEe-cCCcccccCCcCceeEEeecccC-----CCCccEEecCHHHHHHHcCCcCCcchhHHHHHHHHHhc Q lcl|Aclame:pro 1 MALLSPGVELKET-TVQSTVVNNSTGTAALAGKFQWG-----PAFQIKQITDEVALVDMFGTPNTDTADYFMSAMNFLQY 74 (660) Q Consensus 1 ~~~~~PGVyveE~-~~~~~i~gv~Ts~~afvG~~~~G-----pv~~p~~i~s~~e~~~~fG~~~~~~~~~~~v~~~f~ng 74 (660) |+.-+|||||+|+ +++++|.++.|++.+|||+++++ |.++|++|+|+.||...||. ..++.+++.++|.|| T Consensus 1 m~~~~~GV~v~e~~~g~~~i~~v~tav~~~vg~a~~~d~~~~~~~~pv~i~s~~~~~~~~g~---~~tl~~al~~~~~~~ 77 (396) T protein:vir:57 1 MSDYHHGVQVLEINDGTRVISTVSTAIVGMVCTASDADAETFPLNKPVLITNVQSAIAKAGK---KGTLAASLQAIADQS 77 (396) T ss_pred CCCCCCceEEEEcCCCcccccccCCceEEEEEeccCCCcccccCccCeEeecchhhhhhccc---ccchHHHHHHhhhcC Confidence 9999999999999 58999999999999999999986 78999999999999999985 457889999999999 Q ss_pred CCEEEEEEccCccccccccccccccccccccccccccccceeEEeccccccccccceeeeecCCceeeEEeecccccccc Q lcl|Aclame:pro 75 GNDLRVVRAVDRDTAKNSSPVAGNINFTISSAGTNYRVGDKVVVKYSTDIIEPDGEVTSVDSDGKILNIFIPSGKIIAKA 154 (660) Q Consensus 75 G~~~~vvRv~~~~~~~~a~~~~~~l~~t~~~~g~~~~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~a 154 (660) |..||++|+..+......... + ..... T Consensus 78 ~~~~~vv~~~~~~~~~~~~~~----------------------------------------a-~t~~~------------ 104 (396) T protein:vir:57 78 KPVTVVVRVEDGTGDDEETKL----------------------------------------A-QTVSN------------ 104 (396) T ss_pred CceeEeeeccccccccccccc----------------------------------------c-cccee------------ Confidence 999999987432211000000 0 00000 Q ss_pred cccccccccccceeeeeeccccccceeeeecccccccccccccccccccccccceeeecccccccccccccccccccccc Q lcl|Aclame:pro 155 KEIGEYPELGSNWTAEMSGSSSGLSAVITIDSVVMDSGILLTEVETSEEAITSLTFQESIKKYGVPGVVALYPGELGDQL 234 (660) Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~g~~g~~i 234 (660) . . +..... . ...+..+ T Consensus 105 ----------------i------------i-G~~~~~-----------~--------------~~tgl~a---------- 120 (396) T protein:vir:57 105 ----------------I------------I-GTTDEN-----------G--------------QYTGLKA---------- 120 (396) T ss_pred ----------------e------------e-eecccc-----------c--------------cchhhhh---------- Confidence 0 0 000000 0 0000000 Q ss_pred cccccccccccccceeeeeeccccccccccceeeeeccccCcccceeecccCCcccceeEEeeccccccccccccchhhh Q lcl|Aclame:pro 235 EIEIVSKADYDKGASAQLKIYPDGGTRYSTAKAIFGYGPQTDDQYAIIVRRNDSVVQSVVLSTKRGERDIYGSNIFIDDF 314 (660) Q Consensus 235 ~v~i~s~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~e~~~v~~~~~~~~~~~~~~~~~~~ 314 (660) + T Consensus 121 -------------------------------------------------------------------------------l 121 (396) T protein:vir:57 121 -------------------------------------------------------------------------------L 121 (396) T ss_pred -------------------------------------------------------------------------------h Confidence 0 Q ss_pred hhcCCceEEEEEecCCCcccceeeeeeccccccccccchhhhhhhhhhhhhhhcCcceeecccccCCchhhHHHHHHHHH Q lcl|Aclame:pro 315 FAKGASNYIFATAQGWPKGFSGVIKLNGGLSSNETVEAGDLMEAWDLFADRESVNAQLFIAGSCAGESLEVASTVQKHVV 394 (660) Q Consensus 315 ~~~g~~~~~~~~~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 394 (660) . .. . ....+.+....++... ...++.+|. T Consensus 122 ~-~~-~------------------------------------------------~~~~~~p~i~~ap~~~-~~~v~~al~ 150 (396) T protein:vir:57 122 M-GA-E------------------------------------------------SVTGVKPRILGVPGLD-TKEVAVALA 150 (396) T ss_pred h-hc-c------------------------------------------------cceeEEeccccCcccc-hhHHHHHHH Confidence 0 00 0 0000000001111111 135788999 Q ss_pred HHHhhccCeEEEeccccceEEecCCCCcHHHHHHHhhhcccccccccccCcceEEEEechhcccccccccceeechHHHH Q lcl|Aclame:pro 395 AIGDSRQDCLVLCSPPRAAVVGIPVNRAVDNLVDWRTASGTYTDNNFNISSTYAAIDGNYKYQYDKYNDVNRWVPLAADI 474 (660) Q Consensus 395 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~p~~~~~d~~~~~~~~~p~s~~~ 474 (660) .+|++++ +++++ |.|.+.+++++.+||+. ++|.|+++||||++++|+.++..+++|||+++ T Consensus 151 ~~~~~~~-~~~~~--------d~p~~~~~~~~~~~~~~----------~~s~~~~~~~p~~~~~d~~~~~~~~~p~s~~~ 211 (396) T protein:vir:57 151 SVCQELN-AFGYI--------SAWGCKTISEVKAYRQN----------FSQRELMVIWPDFLAWDTVTSTTATAYATARA 211 (396) T ss_pred HHhhhCc-eEEEE--------cCCCCCCHHHHHHHHhc----------cCCceEEEEcceeeeecccCCceeEEehhHHH Confidence 9998774 66555 45667889999999974 67899999999999999999999999999999 Q ss_pred HHHHHHhhccCCceecccceeeceeeec---ccccccCChhhhhhhccccceEEEEecCCeEEEecceecCCCCccccee Q lcl|Aclame:pro 475 AGLCARTDNISQPWMSPAGYNRGQILNV---IKLAIETRQAQRDRLYQEAINPVTGTGGDGYVLYGDKTATSVPSPFDRI 551 (660) Q Consensus 475 AG~~a~~d~~~g~~~span~~~~~v~~~---~~~~~~~~~~e~~~Ln~~gin~i~~~~g~G~~~wG~rT~~~~~~~~~~i 551 (660) ||++||+|.++|+||||+|+++.++.++ +..+...+++|++.||++|||+++ +++|+++||+||+++++ +|+|| T Consensus 212 Ag~~a~~d~~~g~~~spaN~~l~gi~~~~~~~~~~~~~~~~~~~~Ln~~gi~t~~--~~~G~~~wG~rT~~~d~-~~~~i 288 (396) T protein:vir:57 212 LGLRAKIDQEQGWHKTLSNVGVNGVTGISASVFWDLQKPGTDADLLNEAGVTTLV--RRDGFRFWGNRTCSDDP-LFLFE 288 (396) T ss_pred HHHHHHhhhccCcEeccCCceeccccccceecccccCCcchhhhhhhhcCcEEEE--cCCCEEEEcccccCCCc-cccee Confidence 9999999999999999999998887664 334555678899999999999995 46899999999998765 79999 Q ss_pred hhhHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhcCCeeeEEEEEecCCCCHHHhhCCEEEEEEEEEe Q lcl|Aclame:pro 552 NVRRLFNMVKTNIGSASKYRLFELNNAFTRSSFRTETSQYLQGIKALGGVYNFKVVCDTTNNTPAVIDRNEFVATFYLQP 631 (660) Q Consensus 552 ~vrR~~~~i~~~~~~~~~~~v~epn~~~~~~~i~~~i~~~l~~l~~~gal~g~~v~~d~~~nt~~~i~~G~~~~~i~~~p 631 (660) ++|||++||+++|++.++|+|||||++.+|++|+++|+.||++||++|+|.||+|+||+++||+++|++|+|+++|+++| T Consensus 289 ~vrR~~~~i~~~i~~~~~~~v~e~n~~~~~~~i~~~i~~~l~~l~~~gal~g~~v~~d~~~n~~~~i~~G~~~~~v~~~p 368 (396) T protein:vir:57 289 SYTRTAQVLADTMAEAHMWAIDKPITATLIRDIIDGINAKFRELKNNGYIVDGTCWFSEESNDAETLKAGKLYIDYDYTP 368 (396) T ss_pred ehhhHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCceeceEEEEecCCCCHHHhhCCeEEEEEEEEe Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred cCcceEEEEEEEEeecCccHHHHHHhhcC Q lcl|Aclame:pro 632 ARSINYITLNFVATATGADFDELIGAVGG 660 (660) Q Consensus 632 ~~p~e~i~~~~~~~~~~~~~~e~~~~v~~ 660 (660) ++|+|||+|++++... +++++++.|+- T Consensus 369 ~~p~e~I~~~~~~~~~--~~~~~~~~~~~ 395 (396) T protein:vir:57 369 VPPLENLTLRQRITSR--YLASLVTSVNS 395 (396) T ss_pred cCCcceEEEEEEEchH--HHHHHHHHhhc Confidence 9999999999999866 78888888888 No 23 >protein:vir:6079 Length: 396 # NCBI annotation: gpFI # Family: family:all:115 # MgeID: mge:126 # MgeName: WPhi # Cross-refs: genbank:acc:NP_878220;genbank:gi:33438919;genbank:GeneID:1457754 Probab=100.00 E-value=5.8e-95 Score=537.22 Aligned_cols=386 Identities=13% Similarity=0.090 Sum_probs=308.3 Q ss_pred CccccCceEEEEe-cCCcccccCCcCceeEEeecccC-----CCCccEEecCHHHHHHHcCCcCCcchhHHHHHHHHHhc Q lcl|Aclame:pro 1 MALLSPGVELKET-TVQSTVVNNSTGTAALAGKFQWG-----PAFQIKQITDEVALVDMFGTPNTDTADYFMSAMNFLQY 74 (660) Q Consensus 1 ~~~~~PGVyveE~-~~~~~i~gv~Ts~~afvG~~~~G-----pv~~p~~i~s~~e~~~~fG~~~~~~~~~~~v~~~f~ng 74 (660) |..-+|||||+|+ +++++|.+++|++++|||.+.++ |.++|++|+|+.+|+..||. ...+.+++..+|.|| T Consensus 1 m~~~~~Gv~v~e~~~~~~~v~~~~tav~~fvGta~~~~~~~~p~~~p~~v~s~~~~~~~~g~---~~tl~~a~~~~~~~g 77 (396) T protein:vir:60 1 MSDYHHGVQVLEINEGTRVISTVSTAIVGMVCTASDADAEIFPLNKPVLITNVQSAIAKAGK---KGTLAASLQAIADQS 77 (396) T ss_pred CCCCCCCeEEEEcCCCcccccccCceeEEEEecccccccccccCccCeEeechHHHHHhhcC---cchhHHHHHHHhhcc Confidence 9998999999999 58999999999999999999764 88999999999999999994 557889999999999 Q ss_pred CCEEEEEEccCccccccccccccccccccccccccccccceeEEeccccccccccceeeeecCCceeeEEeecccccccc Q lcl|Aclame:pro 75 GNDLRVVRAVDRDTAKNSSPVAGNINFTISSAGTNYRVGDKVVVKYSTDIIEPDGEVTSVDSDGKILNIFIPSGKIIAKA 154 (660) Q Consensus 75 G~~~~vvRv~~~~~~~~a~~~~~~l~~t~~~~g~~~~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~a 154 (660) |..||++|+.......... . . . T Consensus 78 g~~~~vv~~~~~~~~~~~~--------------------------------------------~-~-~------------ 99 (396) T protein:vir:60 78 KPVTVVVRVEDGTGEDEET--------------------------------------------K-L-A------------ 99 (396) T ss_pred CceEEEEeccccccccccc--------------------------------------------c-c-c------------ Confidence 9999999985421000000 0 0 0 Q ss_pred cccccccccccceeeeeeccccccceeeeecccccccccccccccccccccccceeeecccccccccccccccccccccc Q lcl|Aclame:pro 155 KEIGEYPELGSNWTAEMSGSSSGLSAVITIDSVVMDSGILLTEVETSEEAITSLTFQESIKKYGVPGVVALYPGELGDQL 234 (660) Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~g~~g~~i 234 (660) .... .+ T Consensus 100 ---------------------------------~~~~-----------------------------------------~~ 105 (396) T protein:vir:60 100 ---------------------------------QTVS-----------------------------------------NI 105 (396) T ss_pred ---------------------------------cccc-----------------------------------------cc Confidence 0000 00 Q ss_pred cccccccccccccceeeeeeccccccccccceeeeeccccCcccceeecccCCcccceeEEeeccccccccccccchhhh Q lcl|Aclame:pro 235 EIEIVSKADYDKGASAQLKIYPDGGTRYSTAKAIFGYGPQTDDQYAIIVRRNDSVVQSVVLSTKRGERDIYGSNIFIDDF 314 (660) Q Consensus 235 ~v~i~s~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~e~~~v~~~~~~~~~~~~~~~~~~~ 314 (660) ...... .. . .. +.. .+ T Consensus 106 ~~~~d~----------------------------------~~-~-----------------------~t--g~~-al--- 121 (396) T protein:vir:60 106 IGTTDE----------------------------------NG-Q-----------------------YT--GLK-AL--- 121 (396) T ss_pred cccccc----------------------------------cc-c-----------------------cc--chh-hh--- Confidence 000000 00 0 00 000 00 Q ss_pred hhcCCceEEEEEecCCCcccceeeeeeccccccccccchhhhhhhhhhhhhhhcCcceeecccccCCchhhHHHHHHHHH Q lcl|Aclame:pro 315 FAKGASNYIFATAQGWPKGFSGVIKLNGGLSSNETVEAGDLMEAWDLFADRESVNAQLFIAGSCAGESLEVASTVQKHVV 394 (660) Q Consensus 315 ~~~g~~~~~~~~~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 394 (660) ... + ......+....+++. ....++.++. T Consensus 122 -~~~-----------------------------------------------~--~~~~~~~~il~ap~~-~~~~v~~al~ 150 (396) T protein:vir:60 122 -LAA-----------------------------------------------E--SVTGVKPRILGVPGL-DTKEVAVALA 150 (396) T ss_pred -hhc-----------------------------------------------c--cceeeeeeecccccc-ccHHHHHHHH Confidence 000 0 000000111112222 2246889999 Q ss_pred HHHhhccCeEEEeccccceEEecCCCCcHHHHHHHhhhcccccccccccCcceEEEEechhcccccccccceeechHHHH Q lcl|Aclame:pro 395 AIGDSRQDCLVLCSPPRAAVVGIPVNRAVDNLVDWRTASGTYTDNNFNISSTYAAIDGNYKYQYDKYNDVNRWVPLAADI 474 (660) Q Consensus 395 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~p~~~~~d~~~~~~~~~p~s~~~ 474 (660) ++|++++ ++++ +|.|.+.+++++.+||+. ++|.|+++||||++++|+.++..+++|||+++ T Consensus 151 ~~~~~~~-~~~i--------~d~p~~~~~~~a~~~~~~----------~~s~~~~~~~p~~~~~d~~~~~~~~~p~s~~~ 211 (396) T protein:vir:60 151 SVCQKLR-AFGY--------ISAWGCKTISEVKAYRQN----------FSQRELMVIWPDFLAWDTVASTTATAYATARA 211 (396) T ss_pred HHhccCC-eEEE--------EeCCCCCCHHHHHHHHhh----------cCCceEEEEeCceeeecccCCceeEEchhHHH Confidence 9999876 5544 456667899999999974 67889999999999999999999999999999 Q ss_pred HHHHHHhhccCCceecccceeeceeeecc---cccccCChhhhhhhccccceEEEEecCCeEEEecceecCCCCccccee Q lcl|Aclame:pro 475 AGLCARTDNISQPWMSPAGYNRGQILNVI---KLAIETRQAQRDRLYQEAINPVTGTGGDGYVLYGDKTATSVPSPFDRI 551 (660) Q Consensus 475 AG~~a~~d~~~g~~~span~~~~~v~~~~---~~~~~~~~~e~~~Ln~~gin~i~~~~g~G~~~wG~rT~~~~~~~~~~i 551 (660) ||++||+|.++|+||||+|+++.++.++. .....+++.|++.||++|||+++ +++|+++||+||+++++ +|||| T Consensus 212 AG~~a~~d~~~g~~~spaN~~l~gi~~~~~~~~~~~~~~~~~~~~Ln~~gI~~~~--~~~G~~~wG~rT~~~d~-~~~~i 288 (396) T protein:vir:60 212 LGLRAKIDQEQGWHKTLSNVGVNGVTGISASVFWDLQESGTDADLLNESGVTTLI--RRDGFRFWGNRTCSDDP-LFLFE 288 (396) T ss_pred HHHHHHhhhccCcEeCcCCceecceeeceeecccccCCCcchhhhhhhcCcEEEE--cCCCEEEEcccccCCCc-cccee Confidence 99999999999999999999988877653 34456778899999999999994 57899999999998875 69999 Q ss_pred hhhHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhcCCeeeEEEEEecCCCCHHHhhCCEEEEEEEEEe Q lcl|Aclame:pro 552 NVRRLFNMVKTNIGSASKYRLFELNNAFTRSSFRTETSQYLQGIKALGGVYNFKVVCDTTNNTPAVIDRNEFVATFYLQP 631 (660) Q Consensus 552 ~vrR~~~~i~~~~~~~~~~~v~epn~~~~~~~i~~~i~~~l~~l~~~gal~g~~v~~d~~~nt~~~i~~G~~~~~i~~~p 631 (660) ++|||++||+++|++.++|+|||||++.+|++|+.+|++||++||++|+|.||+|+||+++||+++|++|+|+++|+++| T Consensus 289 ~~rR~~~~i~~~i~~~~~~~v~e~n~~~~~~~i~~~i~~~l~~l~~~gal~g~~~~~d~~~nt~~~i~~G~~~~~i~~~p 368 (396) T protein:vir:60 289 NYTRTAQVLADTMAEAHMWAVDKPITATLIRDIVDGINAKFRELKTNGYIVDATCWFSEESNDAETLKAGKLYIDYDYTP 368 (396) T ss_pred ehhhHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCceeceEEEEecCCCCHHHhhCCEEEEEEEEEe Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred cCcceEEEEEEEEeecCccHHHHHHhhcC Q lcl|Aclame:pro 632 ARSINYITLNFVATATGADFDELIGAVGG 660 (660) Q Consensus 632 ~~p~e~i~~~~~~~~~~~~~~e~~~~v~~ 660 (660) ++|||||+++++++.. +++++++.|.- T Consensus 369 ~~pae~I~~~~~~~~~--~~~~~~~~~~~ 395 (396) T protein:vir:60 369 VPPLENLTLRQRITDK--YLANLVTSVNS 395 (396) T ss_pred cCCcceEEEEEEEchH--HHHHHHHHhhc Confidence 9999999999998866 78899999988 No 24 >protein:vir:79141 Length: 391 # NCBI annotation: major tail seath protein gpFI # Family: family:all:115 # MgeID: mge:1863 # MgeName: RSA1 # Cross-refs: genbank:acc:YP_001165276;genbank:gi:145708101;genbank:GeneID:5247152 Probab=100.00 E-value=1.7e-95 Score=540.14 Aligned_cols=379 Identities=14% Similarity=0.093 Sum_probs=300.9 Q ss_pred CccccCceEEEEe-cCCcccccCCcCceeEEeecc-----cCCCCccEEecCHHHHHHHcCCcCCcchhHHHHHHHHHhc Q lcl|Aclame:pro 1 MALLSPGVELKET-TVQSTVVNNSTGTAALAGKFQ-----WGPAFQIKQITDEVALVDMFGTPNTDTADYFMSAMNFLQY 74 (660) Q Consensus 1 ~~~~~PGVyveE~-~~~~~i~gv~Ts~~afvG~~~-----~Gpv~~p~~i~s~~e~~~~fG~~~~~~~~~~~v~~~f~ng 74 (660) |++.+|||||+|+ +++++|.+++|++.+|||++. .+|+|+|++|+|+.||...||. ..++.+++..+|.|| T Consensus 2 ~~~~~pGv~v~e~~~~~~~i~~~~tav~~~vg~a~~a~~~~~p~n~pv~iss~~~~~~~~g~---~gtl~~al~~~~~~g 78 (391) T protein:vir:79 2 PTDYHHGVRVVELNDGTRPIRTIETAVAGIVCTADDADAATFPLDTPVLLTNPQAYIGKAGD---KGTLAHTLDAITDQT 78 (391) T ss_pred CCCCCCCeEEEECCCCcccccccCCceEEEEeecccccccccccccCEEeccHHHHHHhcCC---ccccchhhhhhhccc Confidence 8889999999999 589999999999999999997 6899999999999999999995 457888999999999 Q ss_pred CCEEEEEEccCccccccccccccccccccccccccccccceeEEeccccccccccceeeeecCCceeeEEeecccccccc Q lcl|Aclame:pro 75 GNDLRVVRAVDRDTAKNSSPVAGNINFTISSAGTNYRVGDKVVVKYSTDIIEPDGEVTSVDSDGKILNIFIPSGKIIAKA 154 (660) Q Consensus 75 G~~~~vvRv~~~~~~~~a~~~~~~l~~t~~~~g~~~~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~a 154 (660) |..||+|++.......... .. .. T Consensus 79 g~~~~vv~~~~~~~~~~~~-------------------------------------------~~-~~------------- 101 (391) T protein:vir:79 79 NPLTVVVRVAGGASEAETT-------------------------------------------SN-LI------------- 101 (391) T ss_pred ccceeeecccccccccccc-------------------------------------------cc-cc------------- Confidence 9999999874321100000 00 00 Q ss_pred cccccccccccceeeeeeccccccceeeeecccccccccccccccccccccccceeeecccccccccccccccccccccc Q lcl|Aclame:pro 155 KEIGEYPELGSNWTAEMSGSSSGLSAVITIDSVVMDSGILLTEVETSEEAITSLTFQESIKKYGVPGVVALYPGELGDQL 234 (660) Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~g~~g~~i 234 (660) . . .... ...+ +..+ + T Consensus 102 ---------------------g-~---------~~~~-----------~~~t--------------Gl~~---------l 116 (391) T protein:vir:79 102 ---------------------G-T---------TNAA-----------GRYT--------------GMKA---------L 116 (391) T ss_pred ---------------------c-c---------ccch-----------hhhH--------------HHhh---------h Confidence 0 0 0000 0000 0000 0 Q ss_pred cccccccccccccceeeeeeccccccccccceeeeeccccCcccceeecccCCcccceeEEeeccccccccccccchhhh Q lcl|Aclame:pro 235 EIEIVSKADYDKGASAQLKIYPDGGTRYSTAKAIFGYGPQTDDQYAIIVRRNDSVVQSVVLSTKRGERDIYGSNIFIDDF 314 (660) Q Consensus 235 ~v~i~s~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~e~~~v~~~~~~~~~~~~~~~~~~~ 314 (660) . +. . T Consensus 117 ~-------------------------------------------------------~~---------~------------ 120 (391) T protein:vir:79 117 L-------------------------------------------------------TA---------R------------ 120 (391) T ss_pred h-------------------------------------------------------hh---------h------------ Confidence 0 00 0 Q ss_pred hhcCCceEEEEEecCCCcccceeeeeeccccccccccchhhhhhhhhhhhhhhcCcceeecccccCCchhhHHHHHHHHH Q lcl|Aclame:pro 315 FAKGASNYIFATAQGWPKGFSGVIKLNGGLSSNETVEAGDLMEAWDLFADRESVNAQLFIAGSCAGESLEVASTVQKHVV 394 (660) Q Consensus 315 ~~~g~~~~~~~~~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 394 (660) .. ..+.+.....+.. ...+++.+|. T Consensus 121 -~~-----------------------------------------------------~~~~p~~l~~p~~-~~~~v~~al~ 145 (391) T protein:vir:79 121 -NR-----------------------------------------------------FGVAPRILAVPGL-DSLPVGTELV 145 (391) T ss_pred -hh-----------------------------------------------------hcccchhhcCCcc-chhHHHHHHH Confidence 00 0000000000111 1235788999 Q ss_pred HHHhhccCeEEEeccccceEEecCCCCcHHHHHHHhhhcccccccccccCcceEEEEechhcccccccccceeechHHHH Q lcl|Aclame:pro 395 AIGDSRQDCLVLCSPPRAAVVGIPVNRAVDNLVDWRTASGTYTDNNFNISSTYAAIDGNYKYQYDKYNDVNRWVPLAADI 474 (660) Q Consensus 395 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~p~~~~~d~~~~~~~~~p~s~~~ 474 (660) .+|++++ ++++ +|.|.+.+.+++.+||+. ++|+|+++||||++++|+.++..+++|||+++ T Consensus 146 ~~~~~~~-~~ai--------~d~p~~~t~~~a~~~~~~----------~~s~~~a~~~P~~~~~d~~~~~~~~~p~s~~~ 206 (391) T protein:vir:79 146 TIAQKLR-AFAY--------LSAYGCQTKEEAVAYRSN----------FGQREAMVMWPDFVGWDTAANAETTLWATARA 206 (391) T ss_pred HHHhhcC-cEEE--------EECCCCCCHHHHHHHHhc----------cCCceeEEecceeeeecCcCCceeeechHHHH Confidence 9999987 4444 456677899999999975 67899999999999999999999999999999 Q ss_pred HHHHHHhhccCCceecccceeeceeeecc---cccccCChhhhhhhccccceEEEEecCCeEEEecceecCCCCccccee Q lcl|Aclame:pro 475 AGLCARTDNISQPWMSPAGYNRGQILNVI---KLAIETRQAQRDRLYQEAINPVTGTGGDGYVLYGDKTATSVPSPFDRI 551 (660) Q Consensus 475 AG~~a~~d~~~g~~~span~~~~~v~~~~---~~~~~~~~~e~~~Ln~~gin~i~~~~g~G~~~wG~rT~~~~~~~~~~i 551 (660) ||++||+|.++||||||+|+++.++.++. .........|.+.||++|||+++ +++|+++||+||+++|+ +|||| T Consensus 207 AG~~a~~D~~~g~~~spaN~~l~gi~~~~~~~~~~~~~~~~~~~~Ln~~~I~t~~--~~~G~~~wG~rT~~~d~-~~~~i 283 (391) T protein:vir:79 207 VGLRAKIDNDTGWHKTLSNVAVGGVTGLSRDVFWDLQDPATDAGYLNANEVTTLV--HRDGYRFWGSRTCSADP-LFAFE 283 (391) T ss_pred HHHHHHhhhcccceeccCCceehhhhccccccccccccccchhhhhhhcCceEEE--CCCcEEEEcccccCCCc-cccee Confidence 99999999999999999999987776643 23344566788999999999985 46899999999998765 79999 Q ss_pred hhhHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhcCCeeeEEEEEecCCCCHHHhhCCEEEEEEEEEe Q lcl|Aclame:pro 552 NVRRLFNMVKTNIGSASKYRLFELNNAFTRSSFRTETSQYLQGIKALGGVYNFKVVCDTTNNTPAVIDRNEFVATFYLQP 631 (660) Q Consensus 552 ~vrR~~~~i~~~~~~~~~~~v~epn~~~~~~~i~~~i~~~l~~l~~~gal~g~~v~~d~~~nt~~~i~~G~~~~~i~~~p 631 (660) ++|||++||+++|+++++|+|||||++.+|++|++++++||++||++|+|.||+|+||+++||++++++|+|+++|+++| T Consensus 284 ~~rR~~~~i~~~i~~~~~~~v~epn~~~~~~~i~~~i~~~l~~l~~~g~l~g~~v~~~~~~nt~~~i~~G~~~~~i~~~p 363 (391) T protein:vir:79 284 NYTRTAQVLADTMAEAHMWANDLPMTPTLVRDLLEGINAKLRMLTRNGYLLGGAAWFDADANSKDTLKAGQLAIDYDYTP 363 (391) T ss_pred ehhhHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCceeceEEEEecCCCCHHHhhCCEEEEEEEEEe Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred cCcceEEEEEEEEeecCcc--HHHHHHh Q lcl|Aclame:pro 632 ARSINYITLNFVATATGAD--FDELIGA 657 (660) Q Consensus 632 ~~p~e~i~~~~~~~~~~~~--~~e~~~~ 657 (660) ++|+|||+|+++....... ++++.+| T Consensus 364 ~~p~e~i~~~~~~~~~~~~~~~~~v~~a 391 (391) T protein:vir:79 364 VPPLENLTFRQRITDRYLMQFAEAVKAA 391 (391) T ss_pred cCCcceEEEEEEEchHHHHHHHHHhhcC Confidence 9999999999999877544 5555555 No 25 >protein:vir:103168 Length: 641 # NCBI annotation: gp122 # Family: family:all:661 # MgeID: mge:1583 # MgeName: Syn9 # Cross-refs: genbank:acc:YP_717789;genbank:gi:113200626;genbank:GeneID:4239177 Probab=100.00 E-value=1.7e-94 Score=534.65 Aligned_cols=530 Identities=24% Similarity=0.355 Sum_probs=307.7 Q ss_pred Cc-cccCceEEEEecCCcccccCCcCceeEEeecccCCCCccEEecCHHHHHHHcCCcCCcchhHHHHHHHHHhcCCEEE Q lcl|Aclame:pro 1 MA-LLSPGVELKETTVQSTVVNNSTGTAALAGKFQWGPAFQIKQITDEVALVDMFGTPNTDTADYFMSAMNFLQYGNDLR 79 (660) Q Consensus 1 ~~-~~~PGVyveE~~~~~~i~gv~Ts~~afvG~~~~Gpv~~p~~i~s~~e~~~~fG~~~~~~~~~~~v~~~f~ngG~~~~ 79 (660) |. |+||||||||++.+++|+||+||++||||+|+|||+|+|++|+||.||+++||++++.+|++|+|++||+|||++|| T Consensus 3 m~~~~sPGVyv~E~~~~~~i~~v~tsvaafvG~~~~GP~~~p~~v~s~~d~~~~FG~~~~~~~l~~av~~fF~ngG~~~~ 82 (641) T protein:vir:10 3 VSNQLSPGVVIQERDLTAVTTPIGLNVGVLAAPFTKGPVEEIFEVSTERDLASVFGEPNDYNYEYWFTASQFLSYGGVLK 82 (641) T ss_pred CccccCCceEEEEecCCCcccccCCccceEEecccCCCCCccEEecCHHHHHHHcCCcCCCcchHHHHHHHHHhcCCEEE Confidence 65 99999999999888899999999999999999999999999999999999999999999999999999999999999 Q ss_pred EEEccCcccccccccc-------------------ccccccccccccccccccceeEEeccccccccccceeeeecCCce Q lcl|Aclame:pro 80 VVRAVDRDTAKNSSPV-------------------AGNINFTISSAGTNYRVGDKVVVKYSTDIIEPDGEVTSVDSDGKI 140 (660) Q Consensus 80 vvRv~~~~~~~~a~~~-------------------~~~l~~t~~~~g~~~~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~ 140 (660) |||+.+.+...+.... ...+.+++..+| .|++.+++.+.................... T Consensus 83 vvRv~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~pG---~~gn~l~v~i~~~~~~~~~~~~~~~~~~~~ 159 (641) T protein:vir:10 83 AIRLNAASLKNSVDSGTAPLIKNLQEYETTYESSNSNTFKFASRDAG---ALGNSVGIFITDAGPDQIAVLPAPGTGNEW 159 (641) T ss_pred EEEecCccccccccccchhhccccccccccccCcCccccEEEeccCC---CcCCceEEEEEcCCCcceeeeecccccccc Confidence 9999876544332211 122344555555 578777776543322111110000000000 Q ss_pred e----eEEeeccccccc---------ccccccccccccceeeeeecccccccee--------eeeccccccccccccccc Q lcl|Aclame:pro 141 L----NIFIPSGKIIAK---------AKEIGEYPELGSNWTAEMSGSSSGLSAV--------ITIDSVVMDSGILLTEVE 199 (660) Q Consensus 141 ~----~~~~~~~~~~~~---------a~~~~~~~~~~~~~~~~~~~~~~~~s~~--------~~~~~~~~~~~~~~~~~~ 199 (660) . ..+......... ..............+............. .............+.... T Consensus 160 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~~a~~~~~~~~~~~~a~~~~~~i~~~~~g~~g~~~~~~ 239 (641) T protein:vir:10 160 EFVADEAVTAASGASAKVYRYSIRLTLTNVVGTFVPGGATTISISGSDESVDVLAWDAGNKYLEIALPAGGVTGIFADAQ 239 (641) T ss_pred eeccceeeeeccCcccccccccccccccceeeecccCCcceeEecccccccccccccCCcceeeeeecCCcceeeeeeee Confidence 0 000000000000 0000000000000000000000000000 000000000000000000 Q ss_pred cc-ccccc------cce-eeecccccccccccccccccccccccccccccccccccceeee-eeccccccccccceeeee Q lcl|Aclame:pro 200 TS-EEAIT------SLT-FQESIKKYGVPGVVALYPGELGDQLEIEIVSKADYDKGASAQL-KIYPDGGTRYSTAKAIFG 270 (660) Q Consensus 200 ~~-~~~~~------~~~-~~~~~~~~~~~~~~a~~~g~~g~~i~v~i~s~~~~~~~~~~~~-~v~~~~~~~~~~~~~~~~ 270 (660) .. ..... ... ..............+...+..+....+.+....++........ ........+..+...... T Consensus 240 ~~t~gt~~~t~a~~g~~~~~~~~~~~~~ia~aat~ag~~g~~~~v~~~~v~d~~~a~~~~~g~~~~~va~~~gts~~a~~ 319 (641) T protein:vir:10 240 VVTQGTNTAAIASSGIERRLYIGKDSGSINFAATDAVVDTNATSATISSVRNEYAEREYLPGSKWVNVAARPGTSLYANS 319 (641) T ss_pred eccCCccceeeecccchhhhhhccccccceeeeecccccccceeeEeeeeeeeecccccccccccccccccchhhhhhhh Confidence 00 00000 000 0000000000111122223333333333322222211111100 001111112222233333 Q ss_pred ccccCcccceeecc-------cCCcccceeE-EeeccccccccccccchhhhhhcCCceEEEEEecC------------- Q lcl|Aclame:pro 271 YGPQTDDQYAIIVR-------RNDSVVQSVV-LSTKRGERDIYGSNIFIDDFFAKGASNYIFATAQG------------- 329 (660) Q Consensus 271 ~~~~~~~~~~~~v~-------~~g~~~e~~~-v~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~------------- 329 (660) .+...+..+.+++. .++.+.|++. ++...+.+...+...+....... .+.++...... T Consensus 320 ~g~~~D~~~~lv~d~~~~~~g~~g~v~e~~~~~s~~~~~~~~~~~~~~~~~~~~~-~s~~v~~~~~~~~~~~~~~~~~~~ 398 (641) T protein:vir:10 320 VGGVNDELHVLVIDVDGKITGNPGSVLERFIGVSKASDAKTSIGEVNYYKEVIKQ-QSAYVYWGSHETAPFLGTAANAAA 398 (641) T ss_pred cCCcccceEEEEEeecceeeccccceeeeeecccccCCcccccccceeeeeeecc-ccceEEEecccccccccccccccc Confidence 44445555444443 3556788885 66666666655555444444432 23333211100 Q ss_pred --------------------------------CCcccceeeeeecccccccc-----ccchhhhhhhhhhhhhhhcCcce Q lcl|Aclame:pro 330 --------------------------------WPKGFSGVIKLNGGLSSNET-----VEAGDLMEAWDLFADRESVNAQL 372 (660) Q Consensus 330 --------------------------------~~~~~~~~~~~~gg~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~ 372 (660) ........+.+.||.|+... ....++..++..+...|.+.+.+ T Consensus 399 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gG~d~~~~~~~~~~~~~~~~tg~~~~~~~e~~~i~~ 478 (641) T protein:vir:10 399 GDWGASALNRRYNLLRSTAGTTSFPAGAVTVGSKNNATHYYRLANGADYSASGALYNLSNVDIATAYELIEDPESQVIDY 478 (641) T ss_pred cccccccccccccccccccccccccccccccCCCCcceeEEEeecCcccccccccccccchhHHHHHHHhhhhhhhccce Confidence 00011223567888775432 23445667788888888888777 Q ss_pred eecccccCCchhhHHHHHHHHHHHHhhccCeEEEeccccceEEecCC-CCcHHHHHHHhhhcccccccccccCcceEEEE Q lcl|Aclame:pro 373 FIAGSCAGESLEVASTVQKHVVAIGDSRQDCLVLCSPPRAAVVGIPV-NRAVDNLVDWRTASGTYTDNNFNISSTYAAID 451 (660) Q Consensus 373 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~ 451 (660) +++++... ......+++.+|++|||+|+|||+++|+|+...++.+. ....+++.+||.. +.+|+|+++| T Consensus 479 l~~~~~~~-~~~~~~~v~~~~i~~ce~~~d~~ailD~p~~~~~~~~~~~~~~~~~~~~~~~---------~~~s~yaa~y 548 (641) T protein:vir:10 479 VLSGPAGA-DEAAAIAKATTITTIVESRKDCMAFLSPLRSDVIGVSNTTTVTENLVNYFNQ---------LPSSNYVVFD 548 (641) T ss_pred eeecCCCC-CcchhHHHHHHHHHHHHhcCCEEEEEcCCcccccCCCchhhHHHHHHHHHhh---------cCCCceEEEE Confidence 77766544 34556789999999999999999999999887776553 3557888899864 4689999999 Q ss_pred echhcccccccccceeechHHHHHHHHHHhhccCCceecccceeeceeeecccccccCChhhhhhhccccceEEEEecCC Q lcl|Aclame:pro 452 GNYKYQYDKYNDVNRWVPLAADIAGLCARTDNISQPWMSPAGYNRGQILNVIKLAIETRQAQRDRLYQEAINPVTGTGGD 531 (660) Q Consensus 452 ~p~~~~~d~~~~~~~~~p~s~~~AG~~a~~d~~~g~~~span~~~~~v~~~~~~~~~~~~~e~~~Ln~~gin~i~~~~g~ 531 (660) |||++++||.+++.+++||||++||+|||+|.+|||||||||.++..++|++++++.+++.|++.||++||||||.|||+ T Consensus 549 ~P~~~v~dp~~~~~~~vPpsG~iAGv~ArtD~~rGvwkAPAn~~~~~i~gv~~l~~~~~~~e~~~Lnp~gIN~ir~fpg~ 628 (641) T protein:vir:10 549 SGYKYIYDKYNDVYRYVPCNGDIAGLILETGLEEEPWFSPAGFQRGVLRNAVKLAYSPNKTQRDRLYANRINPVVSFPGH 628 (641) T ss_pred eceeEeecccCCceeEecCCHHHHHHHHhhhccCCceECcCCcccceeeeeeeeeEecChhHHhhhhhcccceEEecCCc Confidence 99999999999999999999999999999999999999999999888999999999999999999999999999999999 Q ss_pred eEEEecceecCCCCcccceehhhHH Q lcl|Aclame:pro 532 GYVLYGDKTATSVPSPFDRINVRRL 556 (660) Q Consensus 532 G~~~wG~rT~~~~~~~~~~i~vrR~ 556 (660) |++- +.-. |.. .+ T Consensus 629 G~v~--~~~~--------~~~--~~ 641 (641) T protein:vir:10 629 AMIN--NNIA--------FHT--KL 641 (641) T ss_pred eeec--ceee--------eee--cC Confidence 9861 1111 100 00 No 26 >protein:vir:2035 Length: 396 # NCBI annotation: gpFI # Family: family:all:115 # MgeID: mge:315 # MgeName: P2 # Cross-refs: genbank:acc:NP_046778;genbank:gi:9630349;genbank:GeneID:1261516 Probab=100.00 E-value=5e-94 Score=532.08 Aligned_cols=386 Identities=13% Similarity=0.085 Sum_probs=306.7 Q ss_pred CccccCceEEEEe-cCCcccccCCcCceeEEeecccC-----CCCccEEecCHHHHHHHcCCcCCcchhHHHHHHHHHhc Q lcl|Aclame:pro 1 MALLSPGVELKET-TVQSTVVNNSTGTAALAGKFQWG-----PAFQIKQITDEVALVDMFGTPNTDTADYFMSAMNFLQY 74 (660) Q Consensus 1 ~~~~~PGVyveE~-~~~~~i~gv~Ts~~afvG~~~~G-----pv~~p~~i~s~~e~~~~fG~~~~~~~~~~~v~~~f~ng 74 (660) |..-+|||||+|+ +++++|.+++|++++|||.+.++ |.++|++|+|+.+|...||+ ...++.++.+||.|| T Consensus 1 m~~~~~GV~v~e~~~g~~~i~~v~tav~~~vg~a~~a~~~~~~l~~pvlvts~~~~~~~~g~---~~tL~~al~~~~~ng 77 (396) T protein:vir:20 1 MSDYHHGVQVLEINEGTRVISTVSTAIVGMVCTASDADAETFPLNKPVLITNVQSAISKAGK---KGTLAASLQAIADQS 77 (396) T ss_pred CCCCCCCeEEEEcCCCcceeeecCCceeEEEeeeccCCCccccCccCEEeechHHHHhhccc---ccchhhhhhhhhccC Confidence 9888999999999 59999999999999999999764 78999999999999999995 456788899999999 Q ss_pred CCEEEEEEccCccccccccccccccccccccccccccccceeEEeccccccccccceeeeecCCceeeEEeecccccccc Q lcl|Aclame:pro 75 GNDLRVVRAVDRDTAKNSSPVAGNINFTISSAGTNYRVGDKVVVKYSTDIIEPDGEVTSVDSDGKILNIFIPSGKIIAKA 154 (660) Q Consensus 75 G~~~~vvRv~~~~~~~~a~~~~~~l~~t~~~~g~~~~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~a 154 (660) |..||++|+.......... ... T Consensus 78 g~~~~v~~~~~~~~~~~~~--------------------------------------------~~a-------------- 99 (396) T protein:vir:20 78 KPVTVVMRVEDGTGDDEET--------------------------------------------KLA-------------- 99 (396) T ss_pred ceeEEEEeccccccccccc--------------------------------------------ccc-------------- Confidence 9999999874321100000 000 Q ss_pred cccccccccccceeeeeeccccccceeeeecccccccccccccccccccccccceeeecccccccccccccccccccccc Q lcl|Aclame:pro 155 KEIGEYPELGSNWTAEMSGSSSGLSAVITIDSVVMDSGILLTEVETSEEAITSLTFQESIKKYGVPGVVALYPGELGDQL 234 (660) Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~g~~g~~i 234 (660) .+.. .+ T Consensus 100 ---------------------------------~t~~-----------------------------------------~~ 105 (396) T protein:vir:20 100 ---------------------------------QTVS-----------------------------------------NI 105 (396) T ss_pred ---------------------------------cccc-----------------------------------------cc Confidence 0000 00 Q ss_pred cccccccccccccceeeeeeccccccccccceeeeeccccCcccceeecccCCcccceeEEeeccccccccccccchhhh Q lcl|Aclame:pro 235 EIEIVSKADYDKGASAQLKIYPDGGTRYSTAKAIFGYGPQTDDQYAIIVRRNDSVVQSVVLSTKRGERDIYGSNIFIDDF 314 (660) Q Consensus 235 ~v~i~s~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~e~~~v~~~~~~~~~~~~~~~~~~~ 314 (660) ...... .... . +.. .+ T Consensus 106 ~~~~~~----------------------------------~~~~-------t-------------------g~~-al--- 121 (396) T protein:vir:20 106 IGTTDE----------------------------------NGQY-------T-------------------GLK-AM--- 121 (396) T ss_pred cccccc----------------------------------cccc-------c-------------------hhh-hh--- Confidence 000000 0000 0 000 00 Q ss_pred hhcCCceEEEEEecCCCcccceeeeeeccccccccccchhhhhhhhhhhhhhhcCcceeecccccCCchhhHHHHHHHHH Q lcl|Aclame:pro 315 FAKGASNYIFATAQGWPKGFSGVIKLNGGLSSNETVEAGDLMEAWDLFADRESVNAQLFIAGSCAGESLEVASTVQKHVV 394 (660) Q Consensus 315 ~~~g~~~~~~~~~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 394 (660) ...... . . ..+....+++. ....++.+|. T Consensus 122 -~~~~~~-~----------------------~--------------------------~~p~i~~ap~~-~~~~v~~al~ 150 (396) T protein:vir:20 122 -LAAESV-T----------------------G--------------------------VKPRILGVPGL-DTKEVAVALA 150 (396) T ss_pred -hhhccc-c----------------------c--------------------------cchhhhhhhhh-ccHHHHHHHH Confidence 000000 0 0 00000011111 1245789999 Q ss_pred HHHhhccCeEEEeccccceEEecCCCCcHHHHHHHhhhcccccccccccCcceEEEEechhcccccccccceeechHHHH Q lcl|Aclame:pro 395 AIGDSRQDCLVLCSPPRAAVVGIPVNRAVDNLVDWRTASGTYTDNNFNISSTYAAIDGNYKYQYDKYNDVNRWVPLAADI 474 (660) Q Consensus 395 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~p~~~~~d~~~~~~~~~p~s~~~ 474 (660) ++|++++ ++++ +|.|.+.+++++.+||+. ++|+|+++||||++++|+.++..+++|||+++ T Consensus 151 ~~~~~~~-~~~~--------iD~p~~~~~~~a~~~r~~----------~~s~~~~~~~P~~~~~d~~~~~~~~~p~s~~~ 211 (396) T protein:vir:20 151 SVCQKLR-AFGY--------ISAWGCKTISEVKAYRQN----------FSQRELMVIWPDFLAWDTVTSTTATAYATARA 211 (396) T ss_pred HHHhcCC-cEEE--------EecCCCCCHHHHHHHhhC----------CCCceEEEEcCccccccCcCCcceeechhHHH Confidence 9999886 4444 456667889999999974 67899999999999999999999999999999 Q ss_pred HHHHHHhhccCCceecccceeeceeeecc---cccccCChhhhhhhccccceEEEEecCCeEEEecceecCCCCccccee Q lcl|Aclame:pro 475 AGLCARTDNISQPWMSPAGYNRGQILNVI---KLAIETRQAQRDRLYQEAINPVTGTGGDGYVLYGDKTATSVPSPFDRI 551 (660) Q Consensus 475 AG~~a~~d~~~g~~~span~~~~~v~~~~---~~~~~~~~~e~~~Ln~~gin~i~~~~g~G~~~wG~rT~~~~~~~~~~i 551 (660) ||++||+|.++|+|+||+|+++.++.++. .....++++|++.||++|||+++ +++|+++||+||+++|+ +|+|| T Consensus 212 Ag~~a~~d~~~g~~~spaN~~l~gi~~~~~~~~~~~~~~~~~~~~Ln~~gi~~~~--~~~G~~~wG~rT~s~d~-~~~~i 288 (396) T protein:vir:20 212 LGLRAKIDQEQGWHKTLSNVGVNGVTGISASVFWDLQESGTDADLLNESGVTTLI--RRDGFRFWGNRTCSDDP-LFLFE 288 (396) T ss_pred HHHHHHhhhhcCcEeccCCceeccceecceecccccCCCcchhhhhhhcCcEEEE--cCCCEEEEcccccCCCc-cccee Confidence 99999999999999999999998887753 33455778899999999999995 46899999999998764 79999 Q ss_pred hhhHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhcCCeeeEEEEEecCCCCHHHhhCCEEEEEEEEEe Q lcl|Aclame:pro 552 NVRRLFNMVKTNIGSASKYRLFELNNAFTRSSFRTETSQYLQGIKALGGVYNFKVVCDTTNNTPAVIDRNEFVATFYLQP 631 (660) Q Consensus 552 ~vrR~~~~i~~~~~~~~~~~v~epn~~~~~~~i~~~i~~~l~~l~~~gal~g~~v~~d~~~nt~~~i~~G~~~~~i~~~p 631 (660) ++||+++||+++|++.++|+|||||++.+|++|+++++.||++||++|+|.||+|+||+++||+++|++|+|+++|+++| T Consensus 289 ~~rR~~~~i~~~~~~~~~~~v~e~~~~~~~~~i~~~i~~~L~~l~~~G~l~g~~v~~d~~~nt~~~i~~G~~~~~i~~~p 368 (396) T protein:vir:20 289 NYTRTAQVVADTMAEAHMWAVDKPITATLIRDIVDGINAKFRELKTNGYIVDATCWFSEESNDAETLKAGKLYIDYDYTP 368 (396) T ss_pred ehhhHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCcceeceEEEEecCCCCHHHhhCCEEEEEEEEEe Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred cCcceEEEEEEEEeecCccHHHHHHhhcC Q lcl|Aclame:pro 632 ARSINYITLNFVATATGADFDELIGAVGG 660 (660) Q Consensus 632 ~~p~e~i~~~~~~~~~~~~~~e~~~~v~~ 660 (660) ++|+|||+|+++.... ++++++++|.- T Consensus 369 ~~p~e~i~~~~~~~~~--~~~~~~~~~~~ 395 (396) T protein:vir:20 369 VPPLENLTLRQRITDK--YLANLVTSVNS 395 (396) T ss_pred cCCcceEEEEEEEchH--HHHHHHHHhhc Confidence 9999999999998765 79999999999 No 27 >protein:vir:98553 Length: 395 # NCBI annotation: gp21 # Family: family:all:115 # MgeID: mge:1533 # MgeName: PSP3 # Cross-refs: genbank:acc:NP_958076;genbank:gi:41057373;genbank:GeneID:2744224 Probab=100.00 E-value=1.5e-93 Score=529.47 Aligned_cols=386 Identities=14% Similarity=0.120 Sum_probs=305.2 Q ss_pred CccccCceEEEEe-cCCcccccCCcCceeEEeecccC-----CCCccEEecCHHHHHHHcCCcCCcchhHHHHHHHHHhc Q lcl|Aclame:pro 1 MALLSPGVELKET-TVQSTVVNNSTGTAALAGKFQWG-----PAFQIKQITDEVALVDMFGTPNTDTADYFMSAMNFLQY 74 (660) Q Consensus 1 ~~~~~PGVyveE~-~~~~~i~gv~Ts~~afvG~~~~G-----pv~~p~~i~s~~e~~~~fG~~~~~~~~~~~v~~~f~ng 74 (660) |..-+|||||+|+ ++++++.+++|++.+|||+++.+ |.++|++|+|+.||+..||. ..++..++..+|.|| T Consensus 1 m~~~~~GV~v~e~~~g~~~v~~v~tav~~~vgta~~~~~~~~p~~~pv~v~s~~~~~~~~g~---~~tl~~al~~~~~~~ 77 (395) T protein:vir:98 1 MSDFHHGTQVIEINDGTRVISTVATAVVGMVCTASDADATLFPLNEPVLITNVQSAIAKAGK---KGTLAASLQAIADQS 77 (395) T ss_pred CCCCCCCeEEEEcCCCcccccccCcceEEEEeeccCCCccccccccceEeechHHhHhhccc---ccchhhHHHHHhhcc Confidence 9999999999999 59999999999999999999875 78999999999999999995 457888999999999 Q ss_pred CCEEEEEEccCccccccccccccccccccccccccccccceeEEeccccccccccceeeeecCCceeeEEeecccccccc Q lcl|Aclame:pro 75 GNDLRVVRAVDRDTAKNSSPVAGNINFTISSAGTNYRVGDKVVVKYSTDIIEPDGEVTSVDSDGKILNIFIPSGKIIAKA 154 (660) Q Consensus 75 G~~~~vvRv~~~~~~~~a~~~~~~l~~t~~~~g~~~~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~a 154 (660) |+.||++|+..+....... . . . T Consensus 78 ~~~~~vv~~~~~~~~~~~~--------------------------------------------~-~-------------a 99 (395) T protein:vir:98 78 KPVTVVVRVEDGTGDDEEA--------------------------------------------A-L-------------A 99 (395) T ss_pred CceEEEeeccccccccccc--------------------------------------------c-c-------------c Confidence 9999999874321110000 0 0 0 Q ss_pred cccccccccccceeeeeeccccccceeeeecccccccccccccccccccccccceeeecccccccccccccccccccccc Q lcl|Aclame:pro 155 KEIGEYPELGSNWTAEMSGSSSGLSAVITIDSVVMDSGILLTEVETSEEAITSLTFQESIKKYGVPGVVALYPGELGDQL 234 (660) Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~g~~g~~i 234 (660) .. ...+.+.... . +.. T Consensus 100 ----~~--------------------~~~i~g~~~~-----------~----------------------------~~~- 115 (395) T protein:vir:98 100 ----QT--------------------VSNIIGGTDE-----------N----------------------------GKY- 115 (395) T ss_pred ----cc--------------------cccccccccc-----------c----------------------------cch- Confidence 00 0000000000 0 000 Q ss_pred cccccccccccccceeeeeeccccccccccceeeeeccccCcccceeecccCCcccceeEEeeccccccccccccchhhh Q lcl|Aclame:pro 235 EIEIVSKADYDKGASAQLKIYPDGGTRYSTAKAIFGYGPQTDDQYAIIVRRNDSVVQSVVLSTKRGERDIYGSNIFIDDF 314 (660) Q Consensus 235 ~v~i~s~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~e~~~v~~~~~~~~~~~~~~~~~~~ 314 (660) + +.. .+ T Consensus 116 ----------------------------------------T------------------------------gl~----al 121 (395) T protein:vir:98 116 ----------------------------------------T------------------------------GIK----AL 121 (395) T ss_pred ----------------------------------------h------------------------------HHH----HH Confidence 0 000 00 Q ss_pred hhcCCceEEEEEecCCCcccceeeeeeccccccccccchhhhhhhhhhhhhhhcCcceeecccccCCchhhHHHHHHHHH Q lcl|Aclame:pro 315 FAKGASNYIFATAQGWPKGFSGVIKLNGGLSSNETVEAGDLMEAWDLFADRESVNAQLFIAGSCAGESLEVASTVQKHVV 394 (660) Q Consensus 315 ~~~g~~~~~~~~~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 394 (660) . .. .....+.+.+++ +|++. ..+++.+|. T Consensus 122 ~-~~--------------------------------------------~~~~~~~p~il~-----ap~~~-~~~v~~al~ 150 (395) T protein:vir:98 122 L-TA--------------------------------------------QAVTGVKPRILG-----VPGLD-TKEVAVALA 150 (395) T ss_pred h-hh--------------------------------------------hhhhccchhhcc-----ccccc-ccHHHHHHH Confidence 0 00 000000001111 11121 235788999 Q ss_pred HHHhhccCeEEEeccccceEEecCCCCcHHHHHHHhhhcccccccccccCcceEEEEechhcccccccccceeechHHHH Q lcl|Aclame:pro 395 AIGDSRQDCLVLCSPPRAAVVGIPVNRAVDNLVDWRTASGTYTDNNFNISSTYAAIDGNYKYQYDKYNDVNRWVPLAADI 474 (660) Q Consensus 395 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~p~~~~~d~~~~~~~~~p~s~~~ 474 (660) .+|++++ ++++ +|.|.+.+.+++.+||+. ++|+|+++||||++++|+.++..+++|||+++ T Consensus 151 ~~~~~~~-~~~~--------~d~p~~~t~~~a~~~~~~----------~~s~~~~~~~p~~~~~d~~~~~~~~~p~s~~~ 211 (395) T protein:vir:98 151 SAAIKLR-AFAY--------VSAWGCKTISEAMEYRKN----------FSQRELMVIWPDFLAWDTVKNTTATAYATARA 211 (395) T ss_pred HHhhhcC-cEEE--------EEcCCCCCHHHHHHHHhc----------cCCceEEEEecceeEecccCCceeeechHHHH Confidence 9999876 5544 456677899999999974 67899999999999999999999999999999 Q ss_pred HHHHHHhhccCCceecccceeeceeeecc---cccccCChhhhhhhccccceEEEEecCCeEEEecceecCCCCccccee Q lcl|Aclame:pro 475 AGLCARTDNISQPWMSPAGYNRGQILNVI---KLAIETRQAQRDRLYQEAINPVTGTGGDGYVLYGDKTATSVPSPFDRI 551 (660) Q Consensus 475 AG~~a~~d~~~g~~~span~~~~~v~~~~---~~~~~~~~~e~~~Ln~~gin~i~~~~g~G~~~wG~rT~~~~~~~~~~i 551 (660) ||++||+|.++|+||||+|+++.++.++. ..+..++++|++.||++|||+++ +++|+++||+||+++++ +|+|| T Consensus 212 AG~~a~~d~~~g~~~spaN~~i~gi~~~~~~~~~~~~~~~~~~~~Ln~~gI~~~~--~~~G~~~wG~rT~s~d~-~~~~i 288 (395) T protein:vir:98 212 LGLRAYIDQTVGWHKTLSNVGVQGVTGISASVFWDLQASGTDADLLNEAGVTTLV--RKDGFRFWGNRTCSDDP-LFLFE 288 (395) T ss_pred HHHHHHhhcccCcEeccCCceeecccccceecccccCCCcchHHhhhhcCcEEEE--cCCCEEEEcccccCCCc-cccee Confidence 99999999999999999999988877753 34566778999999999999995 56899999999998764 79999 Q ss_pred hhhHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhcCCeeeEEEEEecCCCCHHHhhCCEEEEEEEEEe Q lcl|Aclame:pro 552 NVRRLFNMVKTNIGSASKYRLFELNNAFTRSSFRTETSQYLQGIKALGGVYNFKVVCDTTNNTPAVIDRNEFVATFYLQP 631 (660) Q Consensus 552 ~vrR~~~~i~~~~~~~~~~~v~epn~~~~~~~i~~~i~~~l~~l~~~gal~g~~v~~d~~~nt~~~i~~G~~~~~i~~~p 631 (660) ++|||++||+++|++.++|+|||||++.+|++|+++++.||++||++|+|.||+|+||+++||+++|++|+|+++|+++| T Consensus 289 ~~rR~~~~i~~~i~~~~~~~v~e~~~~~~~~~i~~~i~~~L~~l~~~g~l~g~~v~~d~~~nt~~~i~~G~~~~~i~~~p 368 (395) T protein:vir:98 289 NYTRTAQVLADTMAEAHMWAVDKPITATLIRDIVDGINAKFRELKSNGYIVEGKCWFDEESNDKETLKAGKLYIDYDYTP 368 (395) T ss_pred ehhhHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCceeceEEEEecCCCCHHHhhCCeEEEEEEEEe Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred cCcceEEEEEEEEeecCccHHHHHHhhcC Q lcl|Aclame:pro 632 ARSINYITLNFVATATGADFDELIGAVGG 660 (660) Q Consensus 632 ~~p~e~i~~~~~~~~~~~~~~e~~~~v~~ 660 (660) ++|+|||+|+++.+.. +++++++.|+- T Consensus 369 ~~p~e~I~~~~~~~~~--~~~~~~~~~~~ 395 (395) T protein:vir:98 369 VPPLESLTLRQRITDK--YLVNLAESVNS 395 (395) T ss_pred cCCcceEEEEEEEchH--HHHHHHHHhcC Confidence 9999999999999877 45666666666 No 28 >protein:vir:1845 Length: 392 # NCBI annotation: tail sheath protein FI # Family: family:all:115 # MgeID: mge:324 # MgeName: 186 # Cross-refs: genbank:acc:NP_052269;genbank:gi:9634076;genbank:GeneID:1262448 Probab=100.00 E-value=2.5e-93 Score=528.24 Aligned_cols=383 Identities=14% Similarity=0.113 Sum_probs=306.9 Q ss_pred CccccCceEEEEe-cCCcccccCCcCceeEEeecccC-----CCCccEEecCHHHHHHHcCCcCCcchhHHHHHHHHHhc Q lcl|Aclame:pro 1 MALLSPGVELKET-TVQSTVVNNSTGTAALAGKFQWG-----PAFQIKQITDEVALVDMFGTPNTDTADYFMSAMNFLQY 74 (660) Q Consensus 1 ~~~~~PGVyveE~-~~~~~i~gv~Ts~~afvG~~~~G-----pv~~p~~i~s~~e~~~~fG~~~~~~~~~~~v~~~f~ng 74 (660) |.--+|||||+|+ +++++|.+++|++.+|||.+.++ |+++|++|+|+.+|...||. ...+.+++..+|.|| T Consensus 1 m~~~~~Gv~v~e~~~g~~~i~~~~tav~g~vgta~~~~~~~~~~~~p~~its~~~~~~~~g~---~gtl~~al~~~~~ng 77 (392) T protein:vir:18 1 MSDFHHGTKVIEINDGTRVISTVATAIVGMVWTASDADAETFPLNEPVLITNVQSAIAKAGK---KGTLSASLQAIADQS 77 (392) T ss_pred CCCCCCCeEEEEcCCCceeeeccCcceeEEEEeccCCCCcccccccceEeechHHHHhhcCC---CcchHHHHHHhhccc Confidence 8877799999999 69999999999999999999876 89999999999999999985 456888999999999 Q ss_pred CCEEEEEEccCccccccccccccccccccccccccccccceeEEeccccccccccceeeeecCCceeeEEeecccccccc Q lcl|Aclame:pro 75 GNDLRVVRAVDRDTAKNSSPVAGNINFTISSAGTNYRVGDKVVVKYSTDIIEPDGEVTSVDSDGKILNIFIPSGKIIAKA 154 (660) Q Consensus 75 G~~~~vvRv~~~~~~~~a~~~~~~l~~t~~~~g~~~~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~a 154 (660) |..|+++|+..+....... T Consensus 78 g~~~~vv~v~~~~~~~~~~------------------------------------------------------------- 96 (392) T protein:vir:18 78 KPVTVVVRVAEGTGDDAEA------------------------------------------------------------- 96 (392) T ss_pred CceEEEecccccccccccc------------------------------------------------------------- Confidence 9999999874311000000 Q ss_pred cccccccccccceeeeeeccccccceeeeecccccccccccccccccccccccceeeecccccccccccccccccccccc Q lcl|Aclame:pro 155 KEIGEYPELGSNWTAEMSGSSSGLSAVITIDSVVMDSGILLTEVETSEEAITSLTFQESIKKYGVPGVVALYPGELGDQL 234 (660) Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~g~~g~~i 234 (660) ++.. + . .| . . T Consensus 97 ---------------------------------~t~~-----d-------l---------------------iG---~-~ 106 (392) T protein:vir:18 97 ---------------------------------QTTS-----N-------I---------------------IG---G-T 106 (392) T ss_pred ---------------------------------cchh-----h-------h---------------------ee---c-c Confidence 0000 0 0 00 0 0 Q ss_pred cccccccccccccceeeeeeccccccccccceeeeeccccCcccceeecccCCcccceeEEeeccccccccccccchhhh Q lcl|Aclame:pro 235 EIEIVSKADYDKGASAQLKIYPDGGTRYSTAKAIFGYGPQTDDQYAIIVRRNDSVVQSVVLSTKRGERDIYGSNIFIDDF 314 (660) Q Consensus 235 ~v~i~s~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~e~~~v~~~~~~~~~~~~~~~~~~~ 314 (660) . .. + ...+.. . + T Consensus 107 ~--------------------------------------~~------------------------~--~~tg~~-a---l 118 (392) T protein:vir:18 107 D--------------------------------------EN------------------------G--KYTGIK-A---L 118 (392) T ss_pred c--------------------------------------cc------------------------c--hhhhHH-H---H Confidence 0 00 0 000000 0 0 Q ss_pred hhcCCceEEEEEecCCCcccceeeeeeccccccccccchhhhhhhhhhhhhhhcCcceeecccccCCchhhHHHHHHHHH Q lcl|Aclame:pro 315 FAKGASNYIFATAQGWPKGFSGVIKLNGGLSSNETVEAGDLMEAWDLFADRESVNAQLFIAGSCAGESLEVASTVQKHVV 394 (660) Q Consensus 315 ~~~g~~~~~~~~~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 394 (660) . ... ......+.+++ +|+++ ..+++++|. T Consensus 119 ~-~~~--------------------------------------------~~~~~~p~il~-----ap~~~-~~~v~~~l~ 147 (392) T protein:vir:18 119 L-TAE--------------------------------------------AVTGVKPRILG-----VPGLD-TQEVATALA 147 (392) T ss_pred H-hhh--------------------------------------------hhhceeehhcc-----cCccc-hHHHHHHHH Confidence 0 000 00000011111 22222 246899999 Q ss_pred HHHhhccCeEEEeccccceEEecCCCCcHHHHHHHhhhcccccccccccCcceEEEEechhcccccccccceeechHHHH Q lcl|Aclame:pro 395 AIGDSRQDCLVLCSPPRAAVVGIPVNRAVDNLVDWRTASGTYTDNNFNISSTYAAIDGNYKYQYDKYNDVNRWVPLAADI 474 (660) Q Consensus 395 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~p~~~~~d~~~~~~~~~p~s~~~ 474 (660) ++|++++ +++ ++|+|++.+.+++.+||+. ++|+|+++||||++++|+.++..+++|||+++ T Consensus 148 ~~~~~~~-~~~--------~~d~~~~~~~~~a~~~~~~----------~~s~~~~~~~p~~~~~d~~~~~~~~~p~s~~~ 208 (392) T protein:vir:18 148 SVCISLR-AFG--------YVSAWGCKTISEAMAYREN----------FSQRELMVIWPDFLAWDTTANATATAYATARA 208 (392) T ss_pred HHHhhcC-cEE--------EEecCCCCCHHHHHHHHhh----------ccCceEEEEeCceeeecccCCceEEechHHHH Confidence 9999886 444 4566778899999999974 67899999999999999999999999999999 Q ss_pred HHHHHHhhccCCceecccceeeceeeecc---cccccCChhhhhhhccccceEEEEecCCeEEEecceecCCCCccccee Q lcl|Aclame:pro 475 AGLCARTDNISQPWMSPAGYNRGQILNVI---KLAIETRQAQRDRLYQEAINPVTGTGGDGYVLYGDKTATSVPSPFDRI 551 (660) Q Consensus 475 AG~~a~~d~~~g~~~span~~~~~v~~~~---~~~~~~~~~e~~~Ln~~gin~i~~~~g~G~~~wG~rT~~~~~~~~~~i 551 (660) ||++||+|.++||||||+|+++.++.++. ..+..+++.|++.||++|||+++ +++|+++||+||+++|+ +|||| T Consensus 209 AG~~a~~d~~~g~~~spaN~~l~gi~~~~~~~~~~~~~~~~~~~~Ln~~gI~t~~--~~~G~~~wG~rT~~~d~-~~~~i 285 (392) T protein:vir:18 209 LGLRAYIDQTIGWHKTLSNVGVQGVTGISASVFWDLQASGTDADLLNEAGVTTLV--RKDGFRFWGNRTCSDDP-LFLFE 285 (392) T ss_pred HHHHHhhhccCCceEccCCceeeceeecceecccccCCCcchhhhhhhcCceEEE--cCCCEEEEcccccCCCc-cccee Confidence 99999999999999999999998887753 34566778899999999999995 56899999999998765 89999 Q ss_pred hhhHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhcCCeeeEEEEEecCCCCHHHhhCCEEEEEEEEEe Q lcl|Aclame:pro 552 NVRRLFNMVKTNIGSASKYRLFELNNAFTRSSFRTETSQYLQGIKALGGVYNFKVVCDTTNNTPAVIDRNEFVATFYLQP 631 (660) Q Consensus 552 ~vrR~~~~i~~~~~~~~~~~v~epn~~~~~~~i~~~i~~~l~~l~~~gal~g~~v~~d~~~nt~~~i~~G~~~~~i~~~p 631 (660) ++|||++||+++|++.++|+|||||++.+|++|++++++||++||++|+|.||+|+||+++||+++|++|+|+++|+++| T Consensus 286 ~~rR~~~~i~~~i~~~~~~~v~e~n~~~~~~~i~~~i~~~L~~l~~~gal~g~~v~~d~~~nt~~~i~~G~~~~~v~~~p 365 (392) T protein:vir:18 286 NYTRTAQVLADTMAEAHMWAVDKPITASLIRDIVDGINAKFRELKSNGYIVDGECWFDEESNDKETLKAGKLYIDYDYTP 365 (392) T ss_pred ehhhHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhcCcccceEEEEecCCCCHHHhhCCeEEEEEEEEe Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred cCcceEEEEEEEEeecCccHHHHHHhhcC Q lcl|Aclame:pro 632 ARSINYITLNFVATATGADFDELIGAVGG 660 (660) Q Consensus 632 ~~p~e~i~~~~~~~~~~~~~~e~~~~v~~ 660 (660) ++|+|||+|+++.... +++++.+.|+- T Consensus 366 ~~p~e~I~~~~~~~~~--~~~~~~~~~~~ 392 (392) T protein:vir:18 366 VPPLESLTLRQRITDK--YLVNLAESVNS 392 (392) T ss_pred cCCcceEEEEEEEchH--HHHHHHHHhcC Confidence 9999999999998766 57777777777 No 29 >protein:vir:100323 Length: 393 # NCBI annotation: tail sheath protein FI # Family: family:all:115 # MgeID: mge:1484 # MgeName: phi-MhaA1-PHL101 # Cross-refs: genbank:acc:YP_655492;genbank:gi:109289960;genbank:GeneID:4157366 Probab=100.00 E-value=8.2e-92 Score=519.96 Aligned_cols=378 Identities=12% Similarity=0.103 Sum_probs=303.8 Q ss_pred CccccCceEEEEe-cCCcccccCCcCceeEEeecccC-----CCCccEEecCHHHHHHHcCCcCCcchhHHHHHHHHHhc Q lcl|Aclame:pro 1 MALLSPGVELKET-TVQSTVVNNSTGTAALAGKFQWG-----PAFQIKQITDEVALVDMFGTPNTDTADYFMSAMNFLQY 74 (660) Q Consensus 1 ~~~~~PGVyveE~-~~~~~i~gv~Ts~~afvG~~~~G-----pv~~p~~i~s~~e~~~~fG~~~~~~~~~~~v~~~f~ng 74 (660) +++.+|||||+|+ +++++|.+++|++.+|||++.++ |+|+|++|+|+.||.+.||. ..++.+++..+|.|+ T Consensus 4 ~~~~~~GV~v~e~~~g~~~i~~~~tav~~~vgta~~~~~~~~pln~pv~i~s~~~~~~~~g~---~g~L~~al~~~~~~~ 80 (393) T protein:vir:10 4 LDTYLHGVEVVEVNAGGVTISTAATSVIGVVCTGDQADAETFPLNTPVLITNPLNYLEKAGS---TGTLRRTLNSIGSIV 80 (393) T ss_pred CCccCCCeEEEEcCCCcceecccCcceeEEEeeccCcCcccccCccceEecchHHHHHhhCC---ccchhhhhhhhhccc Confidence 5555799999999 69999999999999999999987 99999999999999999994 467889999999999 Q ss_pred CCEEEEEEccCccccccccccccccccccccccccccccceeEEeccccccccccceeeeecCCceeeEEeecccccccc Q lcl|Aclame:pro 75 GNDLRVVRAVDRDTAKNSSPVAGNINFTISSAGTNYRVGDKVVVKYSTDIIEPDGEVTSVDSDGKILNIFIPSGKIIAKA 154 (660) Q Consensus 75 G~~~~vvRv~~~~~~~~a~~~~~~l~~t~~~~g~~~~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~a 154 (660) |+.||+||+...+....... .+ T Consensus 81 ~~~~~vv~v~~~~~~~~t~~--------------------------------------~i-------------------- 102 (393) T protein:vir:10 81 KTPTVIVRVAESDDSDTLTA--------------------------------------NI-------------------- 102 (393) T ss_pred CceEEEeecccCcccccccc--------------------------------------cc-------------------- Confidence 99999999853221100000 00 Q ss_pred cccccccccccceeeeeeccccccceeeeecccccccccccccccccccccccceeeecccccccccccccccccccccc Q lcl|Aclame:pro 155 KEIGEYPELGSNWTAEMSGSSSGLSAVITIDSVVMDSGILLTEVETSEEAITSLTFQESIKKYGVPGVVALYPGELGDQL 234 (660) Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~g~~g~~i 234 (660) .+.. .. .. .+ +..+ + T Consensus 103 ------------------------------ig~~-~~-----------~~---------~t-----gl~a---------l 117 (393) T protein:vir:10 103 ------------------------------VGTQ-EN-----------GK---------FT-----GIKA---------L 117 (393) T ss_pred ------------------------------cccc-cc-----------ch---------hh-----HHHH---------H Confidence 0000 00 00 00 0000 0 Q ss_pred cccccccccccccceeeeeeccccccccccceeeeeccccCcccceeecccCCcccceeEEeeccccccccccccchhhh Q lcl|Aclame:pro 235 EIEIVSKADYDKGASAQLKIYPDGGTRYSTAKAIFGYGPQTDDQYAIIVRRNDSVVQSVVLSTKRGERDIYGSNIFIDDF 314 (660) Q Consensus 235 ~v~i~s~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~e~~~v~~~~~~~~~~~~~~~~~~~ 314 (660) . .. T Consensus 118 ~-----------------------------------------------------------------------------~~ 120 (393) T protein:vir:10 118 L-----------------------------------------------------------------------------TA 120 (393) T ss_pred H-----------------------------------------------------------------------------hh Confidence 0 00 Q ss_pred hhcCCceEEEEEecCCCcccceeeeeeccccccccccchhhhhhhhhhhhhhhcCcceeecccccCCchhhHHHHHHHHH Q lcl|Aclame:pro 315 FAKGASNYIFATAQGWPKGFSGVIKLNGGLSSNETVEAGDLMEAWDLFADRESVNAQLFIAGSCAGESLEVASTVQKHVV 394 (660) Q Consensus 315 ~~~g~~~~~~~~~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 394 (660) ....+ ..+.+++ +|+++ ..+++.+|. T Consensus 121 ~~~~~------------------------------------------------~~p~li~-----apg~~-~~~~~~al~ 146 (393) T protein:vir:10 121 QSTVF------------------------------------------------VKPKLLC-----VPQHD-NQAVATELL 146 (393) T ss_pred hhhcc------------------------------------------------eeeeeee-----ecccc-chHHHHHHH Confidence 00000 0000000 00111 134678899 Q ss_pred HHHhhccCeEEEeccccceEEecCCCCcHHHHHHHhhhcccccccccccCcceEEEEechhcccccccccceeechHHHH Q lcl|Aclame:pro 395 AIGDSRQDCLVLCSPPRAAVVGIPVNRAVDNLVDWRTASGTYTDNNFNISSTYAAIDGNYKYQYDKYNDVNRWVPLAADI 474 (660) Q Consensus 395 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~p~~~~~d~~~~~~~~~p~s~~~ 474 (660) ++|+++++++.+.+ +++++.++++.|++. ++|.|+++||||++++|+.++..+++|||+++ T Consensus 147 ~~~~~~~~~~~v~d---------~~~~t~~~ai~~~~~----------~~s~~~~~~~P~~~~~d~~~~~~~~~p~s~~~ 207 (393) T protein:vir:10 147 SVAKKLNAFAFISD---------NGATTKEQAYTYRQN----------FSQREGMMIFGDWKSYNTDKKAYDTDYAVARA 207 (393) T ss_pred HHhhccCcEEEEEc---------CCCCCHHHHHHHhhh----------cCCceEEEEecccccccccCCceeEeehhHHH Confidence 99999987765544 456789999999874 67889999999999999999999999999999 Q ss_pred HHHHHHhhccCCceecccceeeceeeecc---cccccCChhhhhhhccccceEEEEecCCeEEEecceecCCCCccccee Q lcl|Aclame:pro 475 AGLCARTDNISQPWMSPAGYNRGQILNVI---KLAIETRQAQRDRLYQEAINPVTGTGGDGYVLYGDKTATSVPSPFDRI 551 (660) Q Consensus 475 AG~~a~~d~~~g~~~span~~~~~v~~~~---~~~~~~~~~e~~~Ln~~gin~i~~~~g~G~~~wG~rT~~~~~~~~~~i 551 (660) ||++||+|.++||||||+|+.|.++.++. ...+.+++.|++.||++|||||+ +++|+++||+||++.++ +|+|| T Consensus 208 Ag~~a~~d~~~G~~~spaN~~l~gi~~~~~~~~~~~~~~~~~~~~Ln~~gI~t~~--~~~G~~~wG~rT~s~d~-~~~~i 284 (393) T protein:vir:10 208 CALQAYIDKTVGWHKNISNVELDGVTGITKAVEFDINESSTEANYLNEKGITICL--NHNGFRYWGSRTLATDT-RWAFQ 284 (393) T ss_pred HHHHHHhhcCCCcEEccCCceeeceeecceecccccCCCcchhHhHhhcCceEEE--cCCCEEEEcccccCCCc-cccee Confidence 99999999999999999999998887753 44566778999999999999994 56899999999998765 79999 Q ss_pred hhhHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhcC--CeeeEEEEEecCCCCHHHhhCCEEEEEEEE Q lcl|Aclame:pro 552 NVRRLFNMVKTNIGSASKYRLFELNNAFTRSSFRTETSQYLQGIKALG--GVYNFKVVCDTTNNTPAVIDRNEFVATFYL 629 (660) Q Consensus 552 ~vrR~~~~i~~~~~~~~~~~v~epn~~~~~~~i~~~i~~~l~~l~~~g--al~g~~v~~d~~~nt~~~i~~G~~~~~i~~ 629 (660) ++|||++||+++|++.++|+|||||++.+|++|+++++.||++||++| +|.||+|+||++ ||++||++|+|+++|++ T Consensus 285 ~vrR~~~~i~~~i~~~~~~~v~e~~~~~~~~~i~~~i~~~L~~l~~~g~~al~g~~v~~~~~-nt~~~i~~G~~~~~i~~ 363 (393) T protein:vir:10 285 QSVRTAQIIKETIGAGLAWAVDMPLTPLRVKTMLEAINNKLRSWASGDDPRILGARVWVAEE-ITADIIKSGKFVIKYDY 363 (393) T ss_pred ehhhHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhccccccccceEEecCC-CCHHHhhCCEEEEEEEE Confidence 999999999999999999999999999999999999999999999966 899999999875 88999999999999999 Q ss_pred EecCcceEEEEEEEEeecCccHHHHHHhhcC Q lcl|Aclame:pro 630 QPARSINYITLNFVATATGADFDELIGAVGG 660 (660) Q Consensus 630 ~p~~p~e~i~~~~~~~~~~~~~~e~~~~v~~ 660 (660) +|++|+|||+|+++.+.. +++++++.|.- T Consensus 364 ~p~~p~e~I~~~~~~~~~--~~~~l~~~v~a 392 (393) T protein:vir:10 364 HWIPSLESLGLEQRVNDE--YVVDLVNTLKA 392 (393) T ss_pred EecCCcceEEEEEEEchH--HHHHHHHHHhc Confidence 999999999999999766 69999999998 No 30 >protein:vir:1172 Length: 391 # NCBI annotation: hypothetical protein # Family: family:all:115 # MgeID: mge:24 # MgeName: phi CTX # Cross-refs: genbank:acc:NP_490621;genbank:gi:17313241;genbank:GeneID:927300 Probab=100.00 E-value=3.4e-92 Score=522.03 Aligned_cols=380 Identities=14% Similarity=0.124 Sum_probs=310.2 Q ss_pred CccccCceEEEEe-cCCcccccCCcCceeEEeecc-----cCCCCccEEecCHHHHHHHcCCcCCcchhHHHHHHHHHhc Q lcl|Aclame:pro 1 MALLSPGVELKET-TVQSTVVNNSTGTAALAGKFQ-----WGPAFQIKQITDEVALVDMFGTPNTDTADYFMSAMNFLQY 74 (660) Q Consensus 1 ~~~~~PGVyveE~-~~~~~i~gv~Ts~~afvG~~~-----~Gpv~~p~~i~s~~e~~~~fG~~~~~~~~~~~v~~~f~ng 74 (660) |++.+|||||+|+ +++++|..+.|++.+|+|+++ .+|+++|++|+|+.+|...||. ..++++++.++|.|| T Consensus 3 ~~~~~~GV~v~e~~~~~~~i~~v~tavig~vg~a~~a~~~~~~~~~p~~v~s~~~~~~~~g~---~~tl~~al~~~~~~~ 79 (391) T protein:vir:11 3 ADQYHHGVRVQEINDGTRPIRTIATAIIGLVATAEDADATAFPLDTPVLITNVQAAIGKAGT---SGTLPASLQAIADQA 79 (391) T ss_pred CCcCCCcEEEEECCCCcceecccCCceeEEEEecCCCCCccccccccEEEecchhhheecCC---Cccchhhhhhhhccc Confidence 8899999999999 699999999999999999999 4799999999999999999984 456788899999999 Q ss_pred CCEEEEEEccCccccccccccccccccccccccccccccceeEEeccccccccccceeeeecCCceeeEEeecccccccc Q lcl|Aclame:pro 75 GNDLRVVRAVDRDTAKNSSPVAGNINFTISSAGTNYRVGDKVVVKYSTDIIEPDGEVTSVDSDGKILNIFIPSGKIIAKA 154 (660) Q Consensus 75 G~~~~vvRv~~~~~~~~a~~~~~~l~~t~~~~g~~~~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~a 154 (660) |+.||++|+...+.. . T Consensus 80 g~~~~vv~~~~~~~~--------------------------------------------------~-------------- 95 (391) T protein:vir:11 80 NAATVVVRVKPGEDE--------------------------------------------------A-------------- 95 (391) T ss_pred cceeEEeeecccccc--------------------------------------------------c-------------- Confidence 999999886210000 0 Q ss_pred cccccccccccceeeeeeccccccceeeeecccccccccccccccccccccccceeeecccccccccccccccccccccc Q lcl|Aclame:pro 155 KEIGEYPELGSNWTAEMSGSSSGLSAVITIDSVVMDSGILLTEVETSEEAITSLTFQESIKKYGVPGVVALYPGELGDQL 234 (660) Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~g~~g~~i 234 (660) . T Consensus 96 ---------------------------------~---------------------------------------------- 96 (391) T protein:vir:11 96 ---------------------------------A---------------------------------------------- 96 (391) T ss_pred ---------------------------------c---------------------------------------------- Confidence 0 Q ss_pred cccccccccccccceeeeeeccccccccccceeeeeccccCcccceeecccCCcccceeEEeeccccccccccccchhhh Q lcl|Aclame:pro 235 EIEIVSKADYDKGASAQLKIYPDGGTRYSTAKAIFGYGPQTDDQYAIIVRRNDSVVQSVVLSTKRGERDIYGSNIFIDDF 314 (660) Q Consensus 235 ~v~i~s~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~e~~~v~~~~~~~~~~~~~~~~~~~ 314 (660) . . .+..+. . T Consensus 97 t---------------------------------------------~--------------------~d~~g~------~ 105 (391) T protein:vir:11 97 T---------------------------------------------N--------------------SAVIGG------V 105 (391) T ss_pred c---------------------------------------------c--------------------hhhhcc------c Confidence 0 0 000000 0 Q ss_pred hhcCCceEEEEEecCCCcccceeeeeeccccccccccchhhhhhhhhhhhhhhcCcceeecccccCCchhhHHHHHHHHH Q lcl|Aclame:pro 315 FAKGASNYIFATAQGWPKGFSGVIKLNGGLSSNETVEAGDLMEAWDLFADRESVNAQLFIAGSCAGESLEVASTVQKHVV 394 (660) Q Consensus 315 ~~~g~~~~~~~~~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 394 (660) ...+ ...+.. ..+ +......+.+....+++.++ .+++.+|. T Consensus 106 ~a~~------------------------~~~g~~-----------a~~---~~~~~~~~~p~~~~ap~~~~-~~v~~al~ 146 (391) T protein:vir:11 106 SADG------------------------KYTGMK-----------ALL---AAKARLGVVPRILGVPGLDT-QPVATALI 146 (391) T ss_pred cccc------------------------chhhhh-----------hhh---hhhhhheecccccccccccc-HHHHHHHH Confidence 0000 000000 000 00111112233334444433 46899999 Q ss_pred HHHhhccCeEEEeccccceEEecCCCCcHHHHHHHhhhcccccccccccCcceEEEEechhcccccccccceeechHHHH Q lcl|Aclame:pro 395 AIGDSRQDCLVLCSPPRAAVVGIPVNRAVDNLVDWRTASGTYTDNNFNISSTYAAIDGNYKYQYDKYNDVNRWVPLAADI 474 (660) Q Consensus 395 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~p~~~~~d~~~~~~~~~p~s~~~ 474 (660) ++|++++ +|+++| .|.+.+++++..||+. ++|+|+++||||++++|+.++..+++|||+++ T Consensus 147 ~~~~~~~-~~~i~D--------~p~~~t~~~a~~~r~~----------~~s~~~~~~~p~~~~~~~~~~~~~~~p~s~~~ 207 (391) T protein:vir:11 147 AIAQQLR-AFAYVS--------ASGCKTKEEATAYREN----------FAAREAMVIWPDFLTWSTVVNQTVPAPAVAQA 207 (391) T ss_pred Hhhcccc-eEEEEE--------cCCCCCHHHHHHHhhh----------cCCceEEEEcCcceecccccCceEEechHHHH Confidence 9999874 666655 5567789999999974 67899999999999999999999999999999 Q ss_pred HHHHHHhhccCCceecccceeeceeeecc---cccccCChhhhhhhccccceEEEEecCCeEEEecceecCCCCccccee Q lcl|Aclame:pro 475 AGLCARTDNISQPWMSPAGYNRGQILNVI---KLAIETRQAQRDRLYQEAINPVTGTGGDGYVLYGDKTATSVPSPFDRI 551 (660) Q Consensus 475 AG~~a~~d~~~g~~~span~~~~~v~~~~---~~~~~~~~~e~~~Ln~~gin~i~~~~g~G~~~wG~rT~~~~~~~~~~i 551 (660) ||++||+|.++||||||||+++.++.++. ..+..+++.|++.||++|||+++ +++|+++||+||++.++ +|+|| T Consensus 208 ag~~a~~d~~~g~~~span~~l~gi~~~~~~~~~~~~~~~~~~~~Ln~~gi~~~~--~~~G~~~wG~rT~~~d~-~~~~i 284 (391) T protein:vir:11 208 LGLRARIDQEVGWHKTLSNVAVNGVTGISADVFWDLQSPSTDANYLNENEVTTLV--QEGGFRFWGSRTCSDDP-LFAFE 284 (391) T ss_pred HHHHHHhhccCCcEEccCCceeeceeecccccccccCCCcchhhhhhhcCcEEEE--cCCCEEEEcccccCCCc-cccee Confidence 99999999999999999999998887753 34455678899999999999984 57899999999998765 79999 Q ss_pred hhhHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhcCCeeeEEEEEecCCCCHHHhhCCEEEEEEEEEe Q lcl|Aclame:pro 552 NVRRLFNMVKTNIGSASKYRLFELNNAFTRSSFRTETSQYLQGIKALGGVYNFKVVCDTTNNTPAVIDRNEFVATFYLQP 631 (660) Q Consensus 552 ~vrR~~~~i~~~~~~~~~~~v~epn~~~~~~~i~~~i~~~l~~l~~~gal~g~~v~~d~~~nt~~~i~~G~~~~~i~~~p 631 (660) ++|||++||+++|++.++|+|||||++.+|++|+++++.||++||++|+|+||+|+||+++||+++|++|+|+++|+++| T Consensus 285 ~vrR~~~~i~~~~~~~~~~~v~e~n~~~~~~~i~~~i~~~l~~l~~~g~l~g~~~~~~~~~n~~~~i~~G~~~~~i~~~p 364 (391) T protein:vir:11 285 NYTRTAQVLADTIAEAHMWAVDKPMHPSLVRDILEGVNAKFRELKGLGLIIDAQAWYDPNVNDKDTLKAGKLRITYDYTP 364 (391) T ss_pred ehhhHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhccceeceEEEEecCCCCHHHhhCCeEEEEEEEEe Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred cCcceEEEEEEEEeecCccHHHHHHhhcC Q lcl|Aclame:pro 632 ARSINYITLNFVATATGADFDELIGAVGG 660 (660) Q Consensus 632 ~~p~e~i~~~~~~~~~~~~~~e~~~~v~~ 660 (660) ++|+|||++++++... +++++++.|+- T Consensus 365 ~~p~e~i~~~~~~~~~--~~~~~~~~~~a 391 (391) T protein:vir:11 365 VPPLEDLTFFQKITDS--YLVDFASRVNA 391 (391) T ss_pred cCCcceEEEEEEEchH--HHHHHHHHhcC Confidence 9999999999998766 68999999999 No 31 >protein:vir:96740 Length: 388 # NCBI annotation: phage tail sheath protein FI-like # Family: family:all:115 # MgeID: mge:1628 # MgeName: VP882 # Cross-refs: genbank:acc:YP_001039839;genbank:gi:126010913;genbank:GeneID:5076250 Probab=100.00 E-value=3.7e-90 Score=510.88 Aligned_cols=375 Identities=14% Similarity=0.109 Sum_probs=302.7 Q ss_pred CccccCceEEEEe-cCCcccccCCcCceeEEeecccC----CCCccEEecCHHHHHHHcCCcCCcchhHHHHHHHHHhcC Q lcl|Aclame:pro 1 MALLSPGVELKET-TVQSTVVNNSTGTAALAGKFQWG----PAFQIKQITDEVALVDMFGTPNTDTADYFMSAMNFLQYG 75 (660) Q Consensus 1 ~~~~~PGVyveE~-~~~~~i~gv~Ts~~afvG~~~~G----pv~~p~~i~s~~e~~~~fG~~~~~~~~~~~v~~~f~ngG 75 (660) |..-+|||||+|+ +++++|..++|++.+|||.++.+ |.++|++|.++.|+...||.......+..++..+|.++| T Consensus 4 ~~~~~hGv~v~ev~~g~~~i~~~~tavi~~Vgta~~ad~~~p~~~~~~i~~~~d~~~~~~~~~~~gtl~~al~~~~~~~~ 83 (388) T protein:vir:96 4 IDQFEHNGISIETHEPPPPMGPPGDNVVAWVVTAPDKHADVAFSVPFRVANTADAQYLDSTGNELGTGWHAASETLKKTS 83 (388) T ss_pred CCCCCCceEEEEcCCCcccccccCcceeEEEEecCCCccccccccceeeecchhhhhhhccccccccchhhhHhhhccCC Confidence 6666789999999 58999999999999999999875 899999999999999999988888889999999999999 Q ss_pred CEEEEEEccCccccccccccccccccccccccccccccceeEEeccccccccccceeeeecCCceeeEEeeccccccccc Q lcl|Aclame:pro 76 NDLRVVRAVDRDTAKNSSPVAGNINFTISSAGTNYRVGDKVVVKYSTDIIEPDGEVTSVDSDGKILNIFIPSGKIIAKAK 155 (660) Q Consensus 76 ~~~~vvRv~~~~~~~~a~~~~~~l~~t~~~~g~~~~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~a~ 155 (660) ..|+++|+..++...+.. . +. T Consensus 84 ~~~~vv~v~~g~~~~at~-------------------a----------------------------~i------------ 104 (388) T protein:vir:96 84 VPQYFIVVPEGADDAATM-------------------A----------------------------NI------------ 104 (388) T ss_pred ceEEEEEecccccccccc-------------------c----------------------------ee------------ Confidence 999999985422110000 0 00 Q ss_pred ccccccccccceeeeeeccccccceeeeecccccccccccccccccccccccceeeeccccccccccccccccccccccc Q lcl|Aclame:pro 156 EIGEYPELGSNWTAEMSGSSSGLSAVITIDSVVMDSGILLTEVETSEEAITSLTFQESIKKYGVPGVVALYPGELGDQLE 235 (660) Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~g~~g~~i~ 235 (660) .++....+ +.. T Consensus 105 ----------------------------ig~~~~~t---------------------------------------g~~-- 115 (388) T protein:vir:96 105 ----------------------------IGGIDPTT---------------------------------------GRR-- 115 (388) T ss_pred ----------------------------eeeccccc---------------------------------------chh-- Confidence 00000000 000 Q ss_pred ccccccccccccceeeeeeccccccccccceeeeeccccCcccceeecccCCcccceeEEeeccccccccccccchhhhh Q lcl|Aclame:pro 236 IEIVSKADYDKGASAQLKIYPDGGTRYSTAKAIFGYGPQTDDQYAIIVRRNDSVVQSVVLSTKRGERDIYGSNIFIDDFF 315 (660) Q Consensus 236 v~i~s~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~e~~~v~~~~~~~~~~~~~~~~~~~~ 315 (660) T Consensus 116 -------------------------------------------------------------------------------- 115 (388) T protein:vir:96 116 -------------------------------------------------------------------------------- 115 (388) T ss_pred -------------------------------------------------------------------------------- Confidence Q ss_pred hcCCceEEEEEecCCCcccceeeeeeccccccccccchhhhhhhhhhhhhhhc--CcceeecccccCCchhhHHHHHHHH Q lcl|Aclame:pro 316 AKGASNYIFATAQGWPKGFSGVIKLNGGLSSNETVEAGDLMEAWDLFADRESV--NAQLFIAGSCAGESLEVASTVQKHV 393 (660) Q Consensus 316 ~~g~~~~~~~~~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~v~~~~ 393 (660) .++.+.+.+ .+.+++ +|++++..+|+.+| T Consensus 116 --------------------------------------------~gl~al~~~~~~p~il~-----aPg~s~~~~v~~al 146 (388) T protein:vir:96 116 --------------------------------------------TGIAALTECTERPTLIG-----APGFSQNKAVIDAL 146 (388) T ss_pred --------------------------------------------hHHHHhhhcccceeEEE-----eeccccchHHHHHH Confidence 000000000 001111 11223445789999 Q ss_pred HHHHhhccCeEEEeccccceEEecCCCCcHHHHHHHhhhcccccccccccCcceEEEEechhcccccccccceeechHHH Q lcl|Aclame:pro 394 VAIGDSRQDCLVLCSPPRAAVVGIPVNRAVDNLVDWRTASGTYTDNNFNISSTYAAIDGNYKYQYDKYNDVNRWVPLAAD 473 (660) Q Consensus 394 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~p~~~~~d~~~~~~~~~p~s~~ 473 (660) .++|++++ +|+++|.| +.+.+++.+++...+ ..+++|.|+++||||++++|+.++..+++|||++ T Consensus 147 ~~~~~~~~-~~~i~D~p---------~~~~~~~~~~~~~~~-----~~~~~s~~~~~~~P~~~~~d~~~~~~~~~p~s~~ 211 (388) T protein:vir:96 147 ASMAKRLK-CRAVIDGP---------SGSTQDAIDLSGLLG-----GEGTGHDRVYMVDPMPAIYSRKAQGNIYVPPSTI 211 (388) T ss_pred HHHHhhcC-cEEEEecc---------CCchhHHHHHHhhhh-----ccCcCcceEEEEeCceeeecccCCceeeechHHH Confidence 99999886 77776654 345566666665432 3468899999999999999999999999999999 Q ss_pred HHHHHHHhhccCCceecccceeeceeeec---ccccccCChhhhhhhccccceEEEEecCCeEEEecceecCCCCcccce Q lcl|Aclame:pro 474 IAGLCARTDNISQPWMSPAGYNRGQILNV---IKLAIETRQAQRDRLYQEAINPVTGTGGDGYVLYGDKTATSVPSPFDR 550 (660) Q Consensus 474 ~AG~~a~~d~~~g~~~span~~~~~v~~~---~~~~~~~~~~e~~~Ln~~gin~i~~~~g~G~~~wG~rT~~~~~~~~~~ 550 (660) +||++||+| +||||+|+++ ++.|+ ++.++.+++.|++.||++|||+|++|+++|+++||+||++ |+| T Consensus 212 ~AG~~a~~D----~~~spaN~~i-~i~g~~~~~~~~~~~~~~~~~~Ln~~gI~~i~~~~~~G~~~wG~rT~~-----~~~ 281 (388) T protein:vir:96 212 AMGAVAAVK----PWESPGNQGV-LIQDVARVIDYNILDKSTEGDLLNRNGVSYFARTSMGGFSLIGNRTVT-----GKF 281 (388) T ss_pred HHHHHHhhc----CcccccCeeE-EeeeecccccccccCChhhHHhhhhcCceEEEEecCCcEEEEcccccC-----Ccc Confidence 999999999 5999999998 45554 4556777889999999999999999999999999999983 999 Q ss_pred ehhhHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhcCCeeeEEEEEecCCCCHHHhhCCEEEEEEEEE Q lcl|Aclame:pro 551 INVRRLFNMVKTNIGSASKYRLFELNNAFTRSSFRTETSQYLQGIKALGGVYNFKVVCDTTNNTPAVIDRNEFVATFYLQ 630 (660) Q Consensus 551 i~vrR~~~~i~~~~~~~~~~~v~epn~~~~~~~i~~~i~~~l~~l~~~gal~g~~v~~d~~~nt~~~i~~G~~~~~i~~~ 630 (660) |+||||++||+++|++.++|+|||||++.+|.+|+++|+.||++||++|+|.||+++||+++||+++|++|+|+++|+++ T Consensus 282 i~vrR~~~~i~~si~~~~~~~v~epn~~~~~~~i~~~i~~fL~~l~~~Gal~g~~~~~d~~~nt~~~i~~G~~~~~i~~~ 361 (388) T protein:vir:96 282 ISFVGLEDAIARKLEAASQRAMSKQLTKSFMEQEIKKINLFMQDLVAAEIIPGGEVYLHPTLNTVERYKNGSWYIVIDYG 361 (388) T ss_pred eeehhhHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeEEEEecCCCCHHHhhCCEEEEEEEEE Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred ecCcceEEEEEEEEeecCccHHHHHHhhc Q lcl|Aclame:pro 631 PARSINYITLNFVATATGADFDELIGAVG 659 (660) Q Consensus 631 p~~p~e~i~~~~~~~~~~~~~~e~~~~v~ 659 (660) |++|+|||+|+++.+.. +++++++.|= T Consensus 362 p~~pae~I~~~~~~~~~--~~~~~~~~~~ 388 (388) T protein:vir:96 362 RYSPNEHMIFHLNAVDR--IVEEFIEEVL 388 (388) T ss_pred ecCCcceEEEEEEEchH--HHHHHHHHhC Confidence 99999999999998755 6677777766 No 32 >protein:vir:10336 Length: 386 # NCBI annotation: ORF39 # Family: family:all:115 # MgeID: mge:182 # MgeName: VHML # Cross-refs: genbank:acc:NP_758931;genbank:gi:27311206;genbank:GeneID:956116 Probab=100.00 E-value=4.9e-90 Score=510.20 Aligned_cols=376 Identities=15% Similarity=0.169 Sum_probs=297.5 Q ss_pred Cc-cccCceEEEEe-cCCcccccCCcCceeEEeecccC-----CCCccEEecCHHHHHHHcCCcCCcchhHHHHHHHHHh Q lcl|Aclame:pro 1 MA-LLSPGVELKET-TVQSTVVNNSTGTAALAGKFQWG-----PAFQIKQITDEVALVDMFGTPNTDTADYFMSAMNFLQ 73 (660) Q Consensus 1 ~~-~~~PGVyveE~-~~~~~i~gv~Ts~~afvG~~~~G-----pv~~p~~i~s~~e~~~~fG~~~~~~~~~~~v~~~f~n 73 (660) |. |.+|||||+|+ +++++|.+++|++.+|||.+..+ |+++|++++|+.++...||+. ..+..++.++|.| T Consensus 1 M~~~~~~Gv~v~ev~~~~~~i~~v~tav~~~vg~a~~a~~~~~~~~~pv~i~s~~~~~~~~g~~---~tl~~a~~~~~~~ 77 (386) T protein:vir:10 1 MAEQYLHGAEVVEIDNGARPIRTAQSGVIGLVGTAPDADATAFPLNTPVLIAGSRREAAKLGAG---GTLPQAIDGIFDQ 77 (386) T ss_pred CccccCCCeEEEEcCCCcccccccCcceeEEEEecCCCCCcccccccceEecchHHHHhhcCCC---cchhHHHHHHhcc Confidence 54 88999999999 58999999999999999999875 899999999999999999853 4578889999999 Q ss_pred cCCEEEEEEccCccccccccccccccccccccccccccccceeEEeccccccccccceeeeecCCceeeEEeeccccccc Q lcl|Aclame:pro 74 YGNDLRVVRAVDRDTAKNSSPVAGNINFTISSAGTNYRVGDKVVVKYSTDIIEPDGEVTSVDSDGKILNIFIPSGKIIAK 153 (660) Q Consensus 74 gG~~~~vvRv~~~~~~~~a~~~~~~l~~t~~~~g~~~~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 153 (660) ||+.||++++.++....... .. ... T Consensus 78 gg~~~~vv~~~~~~~~~~t~-------------------------------------------~~-~ig----------- 102 (386) T protein:vir:10 78 TGAVVVVIRVDEGVDSAATQ-------------------------------------------SN-VIG----------- 102 (386) T ss_pred CceeEEEeeccccccccccc-------------------------------------------hh-hhc----------- Confidence 99999999874322110000 00 000 Q ss_pred ccccccccccccceeeeeeccccccceeeeecccccccccccccccccccccccceeeeccccccccccccccccccccc Q lcl|Aclame:pro 154 AKEIGEYPELGSNWTAEMSGSSSGLSAVITIDSVVMDSGILLTEVETSEEAITSLTFQESIKKYGVPGVVALYPGELGDQ 233 (660) Q Consensus 154 a~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~g~~g~~ 233 (660) ....... ...+..+ T Consensus 103 --------------------------------~~~~~t~-------------------------~~tgl~~--------- 116 (386) T protein:vir:10 103 --------------------------------KVDADTE-------------------------QYTGILA--------- 116 (386) T ss_pred --------------------------------ccccccc-------------------------hhhhhHH--------- Confidence 0000000 0000000 Q ss_pred ccccccccccccccceeeeeeccccccccccceeeeeccccCcccceeecccCCcccceeEEeeccccccccccccchhh Q lcl|Aclame:pro 234 LEIEIVSKADYDKGASAQLKIYPDGGTRYSTAKAIFGYGPQTDDQYAIIVRRNDSVVQSVVLSTKRGERDIYGSNIFIDD 313 (660) Q Consensus 234 i~v~i~s~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~e~~~v~~~~~~~~~~~~~~~~~~ 313 (660) +. +.. T Consensus 117 l~-------------------------------------------------------~~~-------------------- 121 (386) T protein:vir:10 117 LL-------------------------------------------------------SAE-------------------- 121 (386) T ss_pred hh-------------------------------------------------------hhc-------------------- Confidence 00 000 Q ss_pred hhhcCCceEEEEEecCCCcccceeeeeeccccccccccchhhhhhhhhhhhhhhcCcceeecccccCCchhhHHHHHHHH Q lcl|Aclame:pro 314 FFAKGASNYIFATAQGWPKGFSGVIKLNGGLSSNETVEAGDLMEAWDLFADRESVNAQLFIAGSCAGESLEVASTVQKHV 393 (660) Q Consensus 314 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 393 (660) .. + . ..+....++.+++..++..+| T Consensus 122 --~~-----~--~----------------------------------------------~~p~i~~ap~~~~~~~v~~~l 146 (386) T protein:vir:10 122 --NT-----V--K----------------------------------------------VQPRILIAPGFSNQKAVADQL 146 (386) T ss_pred --cc-----c--c----------------------------------------------ccccccccccccchhHHHHHH Confidence 00 0 0 000000111222334577778 Q ss_pred HHHHhhccCeEEEeccccceEEecCCCCcHHHHHHHhhhcccccccccccCcceEEEEechhcccccccccceeechHHH Q lcl|Aclame:pro 394 VAIGDSRQDCLVLCSPPRAAVVGIPVNRAVDNLVDWRTASGTYTDNNFNISSTYAAIDGNYKYQYDKYNDVNRWVPLAAD 473 (660) Q Consensus 394 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~p~~~~~d~~~~~~~~~p~s~~ 473 (660) ..+|++++ .+. +..+++++.+++.+|+.. ++|.|+++||||++++|+.++..+++|||++ T Consensus 147 ~~~~~~~~-~~~---------~~~~~~~~~~~a~~~~~~----------~~s~~~~~~~p~~~v~~~~~~~~~~~p~s~~ 206 (386) T protein:vir:10 147 VSVADTAA-WLC---------HSGWSNTTDAAAITYREL----------FGSRRCEVVDPWYKVWDVETSAHIIQPPSAR 206 (386) T ss_pred HHhhcceE-EEE---------EeCCCCCchHHHHHhhhc----------ccccceEEecCceeeeccccccceeechHHH Confidence 88887765 222 223456788888888864 6789999999999999999999999999999 Q ss_pred HHHHHHHhhccCCceecccceeeceeeecc---cccccCChhhhhhhccccceEEEEecCCeEEEecceecCCCCcccce Q lcl|Aclame:pro 474 IAGLCARTDNISQPWMSPAGYNRGQILNVI---KLAIETRQAQRDRLYQEAINPVTGTGGDGYVLYGDKTATSVPSPFDR 550 (660) Q Consensus 474 ~AG~~a~~d~~~g~~~span~~~~~v~~~~---~~~~~~~~~e~~~Ln~~gin~i~~~~g~G~~~wG~rT~~~~~~~~~~ 550 (660) +||++||+|.++||||||+|+++.++.++. ..+..+++.|++.||++||+++ ++++|+++||+||++.+ +.|+| T Consensus 207 ~ag~~a~~D~~~G~~~spaN~~l~gv~~~~~~~~~~~~~~~~~~~~l~~~gi~~~--~~~~G~~~wG~rT~~~d-~~~~~ 283 (386) T protein:vir:10 207 HAGVMAKVHNTLGFWWSNSNQEILGIDGLCRPVDFKLDDPTCRANLLNAKEVTTT--IQQNGFRVWGDRTCSAD-SKWAF 283 (386) T ss_pred HHHHHHHhhhcCCcEEccCCceeecccccceecccccccCcchhhhhhhcCcEEE--EcCCCEEEEcccccCCC-cccce Confidence 999999999999999999999998887763 4456678899999999999987 56899999999999776 58999 Q ss_pred ehhhHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhcCCeeeEEEEEecCCCCHHHhhCCEEEEEEEEE Q lcl|Aclame:pro 551 INVRRLFNMVKTNIGSASKYRLFELNNAFTRSSFRTETSQYLQGIKALGGVYNFKVVCDTTNNTPAVIDRNEFVATFYLQ 630 (660) Q Consensus 551 i~vrR~~~~i~~~~~~~~~~~v~epn~~~~~~~i~~~i~~~l~~l~~~gal~g~~v~~d~~~nt~~~i~~G~~~~~i~~~ 630 (660) |++|||++||+++|++.++|+|||||++.+|++|++++++||++||++|+|.||+|+||+++||++++++|+|+++|+++ T Consensus 284 i~vrR~~~~i~~~~~~~~~~~v~e~~~~~~~~~i~~~i~~~L~~l~~~g~l~g~~v~~d~~~nt~~~~~~G~~~~~i~~~ 363 (386) T protein:vir:10 284 KNVVITNDMIADSLVRNHLWAVDRNITKTYVEDVTEGVNNYLRHLKNIGAIAGGECWVDPELNSPDQIQQGKVYFDYDFS 363 (386) T ss_pred eehhhHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeEEEEcccCCCHHHhhCCeEEEEEEEE Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred ecCcceEEEEEEEEeecCccHHHHH Q lcl|Aclame:pro 631 PARSINYITLNFVATATGADFDELI 655 (660) Q Consensus 631 p~~p~e~i~~~~~~~~~~~~~~e~~ 655 (660) |++|+|||+|+++++.. +|++++ T Consensus 364 p~~p~e~i~~~~~~~~~--~~~~~~ 386 (386) T protein:vir:10 364 AYAPAEHITFRSHMVNG--YLTEVV 386 (386) T ss_pred ecCCceeEEEEEEEehh--HHHhhC Confidence 99999999999999866 799999 No 33 >protein:vir:5833 Length: 742 # NCBI annotation: similar to tail sheath protein # Family: family:all:661 # MgeID: mge:123 # MgeName: RM 378 # Cross-refs: genbank:acc:NP_835619;genbank:gi:30044022 Probab=100.00 E-value=3.3e-76 Score=434.36 Aligned_cols=556 Identities=19% Similarity=0.187 Sum_probs=275.2 Q ss_pred CccccCceEEEE--ecCCcccccCCcCceeEEeecccCCC-CccEEe--cCHHHHHHHcCCcCCcc--hhHHHHHHHHHh Q lcl|Aclame:pro 1 MALLSPGVELKE--TTVQSTVVNNSTGTAALAGKFQWGPA-FQIKQI--TDEVALVDMFGTPNTDT--ADYFMSAMNFLQ 73 (660) Q Consensus 1 ~~~~~PGVyveE--~~~~~~i~gv~Ts~~afvG~~~~Gpv-~~p~~i--~s~~e~~~~fG~~~~~~--~~~~~v~~~f~n 73 (660) +++-+|.|-+-- ++..-.-+.-.-+|.--=-.-+.||. |.-+.+ |-|- |-..||-|...- |-.++....=+| T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (742) T protein:vir:58 147 INLNAPSVTLPSNIVPLFFYYEPYTGSITLQSSVNYSGLTLNYTVSKATTPWV-YFAEYGTPTSSLTLYKGFYLEGIDLN 225 (742) T ss_pred EEeeceeEeeccccceeeeEeccccceEEEeeecccCCCcccceeeeeecCcc-cccccCCCccceeeeecccccccccC Confidence 333444443310 11111111111111111111234565 332222 2222 335566665432 223333444446 Q ss_pred cCCEEEEEEccCccccccccccccccccccccccccccccceeEEeccccccccccceeeeecCCceeeEEeeccccccc Q lcl|Aclame:pro 74 YGNDLRVVRAVDRDTAKNSSPVAGNINFTISSAGTNYRVGDKVVVKYSTDIIEPDGEVTSVDSDGKILNIFIPSGKIIAK 153 (660) Q Consensus 74 gG~~~~vvRv~~~~~~~~a~~~~~~l~~t~~~~g~~~~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 153 (660) |-.+-+||.+-+-. .-..+|...-.... .|.|... +-.+.++..... T Consensus 226 ~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~-~~~~~~~-------~~~~~~~~~~~~----------- 272 (742) T protein:vir:58 226 SFNKQFVVSIENIT--------------VNREKGQVLYPSFD-VVVHFRD-------IRGVSANTEYIR----------- 272 (742) T ss_pred cccceeeEEEeeee--------------ecccCCceecccee-EEEEEee-------ccCCCCCcccee----------- Confidence 66666666542110 00112210000000 0000000 000000000000 Q ss_pred ccccccccccccceeeeeeccccccceeeeecccccccccccccccccccccccceeeecccccc----------ccccc Q lcl|Aclame:pro 154 AKEIGEYPELGSNWTAEMSGSSSGLSAVITIDSVVMDSGILLTEVETSEEAITSLTFQESIKKYG----------VPGVV 223 (660) Q Consensus 154 a~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~ 223 (660) ......+..+..++.++.+..+...+-...++++.+. +.. ............... ..+.. T Consensus 273 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--n~~----~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~ 342 (742) T protein:vir:58 273 ----FRQVNLNPESPNYIERVIGNMTFEFDGERIVTGGEYP--NQV----PFLRVVVSQDIKQNVAGVEKWVPVGFEGIY 342 (742) T ss_pred ----eeeeecCCCCcceeeecccceeeeeccceeeeccccc--ccc----cceeeEeccccCcCccceeEEEeccccccc Confidence 0111222333444555555444333322222222111 000 000000000000000 00000 Q ss_pred cccccc-cc---ccccccccccccccccceeeeeeccccccccccceeeeeccccCcccceeecccC-Cc----ccceeE Q lcl|Aclame:pro 224 ALYPGE-LG---DQLEIEIVSKADYDKGASAQLKIYPDGGTRYSTAKAIFGYGPQTDDQYAIIVRRN-DS----VVQSVV 294 (660) Q Consensus 224 a~~~g~-~g---~~i~v~i~s~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~-g~----~~e~~~ 294 (660) ++..-. .. ..+.+.++..+.. ++.............+..+.+..... +. ....+. T Consensus 343 ~v~d~~~~~~~~~~v~~~~t~~~~~----------------pp~~~~~~e~v~~ngG~~f~v~s~~~~g~~i~~~~as~~ 406 (742) T protein:vir:58 343 SVGDFTVIVNELTNVSIPVTDSAII----------------PPMRFTRIEQITLSGGASFSVISNQPYGFNIQDSRHSYW 406 (742) T ss_pred cccceeeeccccccceeeccccccC----------------CcccccccceeecccCcceEEEEecccCcceeccCcceE Confidence 000000 00 0001111100000 00000000000000000011100000 00 000011 Q ss_pred EeeccccccccccccchhhhhhcCCceEEEEEecCCCcccceeeeeeccccccccc-----------cchh-hhhhhhhh Q lcl|Aclame:pro 295 LSTKRGERDIYGSNIFIDDFFAKGASNYIFATAQGWPKGFSGVIKLNGGLSSNETV-----------EAGD-LMEAWDLF 362 (660) Q Consensus 295 v~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gg~~~~~~~-----------~~~~-~~~~~~~~ 362 (660) ++...+.....+....... .+....+.................+.||.++...+ ...+ ..+...++ T Consensus 407 ~s~ln~~~~V~Gt~aa~~~--~d~~t~~~v~s~~~alp~~a~sv~laGG~dg~v~v~~~~~D~iG~~~~~d~~~adrTGL 484 (742) T protein:vir:58 407 LSPFKDDELIIGTELVLPA--LDVSTEFGVSSWEEALPEFSFLMPFQGGSDGYIRVDENEPDTIGRVKITPALLANYERL 484 (742) T ss_pred EeccCCceEEEeehhhccc--cccchheeccccccccceeeEEEeecCCccccccccCCCcccccccccccccccchhHH Confidence 1111111111111100000 00000000000111111111222333443321110 0000 00112233 Q ss_pred hhhhhc-CcceeecccccCCchhhHHHHHHHHHHHHhhccCeEEEeccccceEEecCCC-CcHHHHHHHhhhcccccccc Q lcl|Aclame:pro 363 ADRESV-NAQLFIAGSCAGESLEVASTVQKHVVAIGDSRQDCLVLCSPPRAAVVGIPVN-RAVDNLVDWRTASGTYTDNN 440 (660) Q Consensus 363 ~~~~~~-~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 440 (660) .++... .+.+++.++. .+ ..++.++.++|+.+++++.++ .|.|.. ++.+++.+|++. T Consensus 485 ~ALlev~eVtILiAPG~-----t~-~~v~aav~A~la~a~~Rl~vL-------~D~P~~~tt~~~A~a~r~~-------- 543 (742) T protein:vir:58 485 LPLLTEDQFDLVLTPYL-----TF-ADHAGTVNAFINRAENRFLYL-------FDIAGDDDTENLAISLAGY-------- 543 (742) T ss_pred HHhhhcCCCcEEEEcCC-----Cc-hHHHHHHHHHHHhhcCCeEEE-------EecCCCCchHHHHHHHHhc-------- Confidence 333222 2344443322 11 235677788888776665432 344444 345667777753 Q ss_pred cccCcceEEEEechhcccccccccceeechHHHHHHHHHHhhccCCceecccceeeceeeecccccccCChhhhhhhccc Q lcl|Aclame:pro 441 FNISSTYAAIDGNYKYQYDKYNDVNRWVPLAADIAGLCARTDNISQPWMSPAGYNRGQILNVIKLAIETRQAQRDRLYQE 520 (660) Q Consensus 441 ~~~~s~~~~~~~p~~~~~d~~~~~~~~~p~s~~~AG~~a~~d~~~g~~~span~~~~~v~~~~~~~~~~~~~e~~~Ln~~ 520 (660) ++|+|+++||||+++.+ ++..+++|||+++||++||+|.++|+|+||+|+.+. .+ ...++.|++.||++ T Consensus 544 --~nSsraaly~PwVkv~d--~~~~r~vPpSgaIAGL~ARtD~erGvw~SPANrgii--~~-----~~~s~se~d~LN~~ 612 (742) T protein:vir:58 544 --INSSFATTFFPWVRRLT--NKGMRTVPASLAAYRSIRTTDPETGLAPVGARRGVV--TG-----EPVRQVDWEDLYNN 612 (742) T ss_pred --cCCceEEEEeceeeecc--CCcceeechHHHHHHHHHHhccCCceEecCCcceee--ec-----cccchhhHHHHhhC Confidence 67899999999999766 467889999999999999999999999999998542 21 34678899999999 Q ss_pred cceEEEEecCCeEEEecceecCCCCcccceehhhHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhcCC Q lcl|Aclame:pro 521 AINPVTGTGGDGYVLYGDKTATSVPSPFDRINVRRLFNMVKTNIGSASKYRLFELNNAFTRSSFRTETSQYLQGIKALGG 600 (660) Q Consensus 521 gin~i~~~~g~G~~~wG~rT~~~~~~~~~~i~vrR~~~~i~~~~~~~~~~~v~epn~~~~~~~i~~~i~~~l~~l~~~ga 600 (660) |||+|++| |+|+++||+||+.++|++|+|||||||++||+++|+++++|+||||||+.||++|++++++||++||++|+ T Consensus 613 GINtIrsf-G~G~rlWGnRTlassDs~wryInVRRlfd~Ie~SI~~a~q~~VfEPNd~~L~~sIk~sInafL~~L~aqGA 691 (742) T protein:vir:58 613 RINPIVRV-GNDVLLFGQKTMLNVNSALNRINVRRLLIVMRNRISQILSSYLFENNTSENRLRAEALVRQYLESLRLRGA 691 (742) T ss_pred CceEEEEC-CCcEEEEcceecCCCCcccceEeehhhHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCc Confidence 99999997 68999999999977778999999999999999999999999999999999999999999999999999999 Q ss_pred eeeEEEEEecCCCCHHHhhCCEEEEEEEEEecCcceEEEEEEEEeecCccHH Q lcl|Aclame:pro 601 VYNFKVVCDTTNNTPAVIDRNEFVATFYLQPARSINYITLNFVATATGADFD 652 (660) Q Consensus 601 l~g~~v~~d~~~nt~~~i~~G~~~~~i~~~p~~p~e~i~~~~~~~~~~~~~~ 652 (660) |.||+|+||+ +||++||++|+|+++|+++|++|||||+|+|.+.+++++|+ T Consensus 692 LlGfrV~lDe-tNTpeDI~~Gklvv~I~vAP~~PAEfI~lrf~it~tga~Fs 742 (742) T protein:vir:58 692 VTDYEVAIDS-VTTPTDIDNNTLRARVTVQPARSIEYIDITFVITPTGVEIT 742 (742) T ss_pred eeeeEEEEcC-CCCHHHhhCCEEEEEEEEEccCCcceEEEEEEEEecccccC Confidence 9999999995 69999999999999999999999999999999999999999 No 34 >protein:vir:63742 Length: 562 # NCBI annotation: Tsh # Family: family:all:2449 # MgeID: mge:1517 # MgeName: P100 # Cross-refs: genbank:gi:82547629;genbank:GeneID:3783475 Probab=100.00 E-value=1.4e-66 Score=381.69 Aligned_cols=532 Identities=14% Similarity=0.092 Sum_probs=316.8 Q ss_pred CccccCceEEEEe-cCCcccccCCcCceeEEeecccCCCCccEEecCHHHHHHHcCCcCCcchhHHHHHHHHHhcCCEEE Q lcl|Aclame:pro 1 MALLSPGVELKET-TVQSTVVNNSTGTAALAGKFQWGPAFQIKQITDEVALVDMFGTPNTDTADYFMSAMNFLQYGNDLR 79 (660) Q Consensus 1 ~~~~~PGVyveE~-~~~~~i~gv~Ts~~afvG~~~~Gpv~~p~~i~s~~e~~~~fG~~~~~~~~~~~v~~~f~ngG~~~~ 79 (660) =-|++|||||||. |+.+++++++|++++|||.|++||+++|++|+||.||+++||+-.--.+..+|...||.|||++|| T Consensus 9 ~~~~~Pgv~~~~~~s~~~~~~~~~~~~~~~iG~a~~G~~~~~~~~~~~~~~~~~fg~g~l~~~i~~a~~~~~~~g~~~~~ 88 (562) T protein:vir:63 9 KPVSRPHTEISVDTSGIGGSSSGSEKILCLVGSATGGKPNAVYKVRNYSQAKSVFRSGELLDAIERAWNPGEGTGAGDIL 88 (562) T ss_pred CcccCCceEEEEecCCCcccCCCCCceEEEEEEeCCCCCceeEEEccHHHHHHHhcCCchHHHHHHhccccccCCceEEE Confidence 3478999999999 689999999999999999999999999999999999999999855333444455555689999999 Q ss_pred EEEccCccccccccccccccccccccccccccccceeEEeccccccccccceeeeecCCceeeEEeeccccccccccccc Q lcl|Aclame:pro 80 VVRAVDRDTAKNSSPVAGNINFTISSAGTNYRVGDKVVVKYSTDIIEPDGEVTSVDSDGKILNIFIPSGKIIAKAKEIGE 159 (660) Q Consensus 80 vvRv~~~~~~~~a~~~~~~l~~t~~~~g~~~~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~a~~~~~ 159 (660) +|||.+ +++++...+.+.+++...| .|++.+++....+..........+...+...+++...+.. T Consensus 89 ~~rv~~---a~~a~~~~~~~~~~a~~~g---~~~n~i~v~~~~~~~~~~~~~~v~~~~~~~~ev~~~~g~V--------- 153 (562) T protein:vir:63 89 AMRVEE---AKEATFEAEGVKVSSTIYG---ADANDIQVALEDNTITGTKRLSIVFAKERVNQVYDNLGSI--------- 153 (562) T ss_pred EEEcCC---CccceeEecceeEEEeecc---cCCCeEEEEEecCCCCCCcceEEEecCCCcchhhhhccce--------- Confidence 999943 3334444556788887787 4788888777544322221211111111111221111000 Q ss_pred ccccccceeeeeeccccccceeeeecccccccccccccccccccccccceeeeccccc-----------ccccccccccc Q lcl|Aclame:pro 160 YPELGSNWTAEMSGSSSGLSAVITIDSVVMDSGILLTEVETSEEAITSLTFQESIKKY-----------GVPGVVALYPG 228 (660) Q Consensus 160 ~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~a~~~g 228 (660) ......+........+.... .+........... ..+...+......+ ......+.+++ T Consensus 154 -------~~i~y~g~~~~~~~~v~~~~-~~~~a~~l~~~~g---~~~v~~~~L~~g~~~~~~~l~~~in~~~~~~aky~~ 222 (562) T protein:vir:63 154 -------FSIKYKGTEASATFTVAVDP-VTFKATKLTLKAG---DKTVKEYDLGSGAYAETNVLISDINNLPDFEAKFFP 222 (562) T ss_pred -------eeeeeecccccceEEEEecC-cceeEEEEEeecC---CcceeEEEecCCccchhHHHHHhhccccceEEEeec Confidence 00000000000000000000 0000000000000 00000000000000 00001111111 Q ss_pred cccccccccccccccccccceeeeeeccccccccccceeeeeccccCcccceeecccCCcccceeEEeeccccccccccc Q lcl|Aclame:pro 229 ELGDQLEIEIVSKADYDKGASAQLKIYPDGGTRYSTAKAIFGYGPQTDDQYAIIVRRNDSVVQSVVLSTKRGERDIYGSN 308 (660) Q Consensus 229 ~~g~~i~v~i~s~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~e~~~v~~~~~~~~~~~~~ 308 (660) .-++.+.+.. .+.+.+ ..+.. .. .+... T Consensus 223 ~~gn~i~~~~-----------------------------------------------~d~~~~-~~vkt---~~-~~v~t 250 (562) T protein:vir:63 223 IGDKNLTTDN-----------------------------------------------FDAQID-VDIKT---KE-AYVKA 250 (562) T ss_pred cCCceeeeec-----------------------------------------------cccccc-cchhh---hh-hhhhh Confidence 1111111100 000000 00000 00 00000 Q ss_pred cchhhhhhcCCceEEEEEecCCC-cccceeeeeeccccccccccchhhhhhhhhhhhhhhcCcceeecccccCCchhhHH Q lcl|Aclame:pro 309 IFIDDFFAKGASNYIFATAQGWP-KGFSGVIKLNGGLSSNETVEAGDLMEAWDLFADRESVNAQLFIAGSCAGESLEVAS 387 (660) Q Consensus 309 ~~~~~~~~~g~~~~~~~~~~~~~-~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 387 (660) ........+....++........ ........|.||.++.... ++..+++.|+. .+...+.+. .... T Consensus 251 ~~~d~~~~~~~~~~v~~~~~~~~~la~~~~~~LtGG~dGt~~~---~~~~al~ale~---~~~~~i~~~-------t~d~ 317 (562) T protein:vir:63 251 VGGDIEKQTAYNGYVDFEFDRSKEIANFPLTKLTGGDNGTIPE---SWADKFSYFAN---EGGYYLVPL-------TSKQ 317 (562) T ss_pred hhhhhhhcccccceeeeeeccccceecccceeeecCCCCCchh---hHHHHHHHHHh---CCcEEEEec-------CCCH Confidence 00000001111122222111111 1112345788998875432 34444444443 333333332 1234 Q ss_pred HHHHHHHHHHhhccCeEEEeccccceEEecCCCCcHHHHHHHhhhcccccccccccCcceEEEEechhccccccccccee Q lcl|Aclame:pro 388 TVQKHVVAIGDSRQDCLVLCSPPRAAVVGIPVNRAVDNLVDWRTASGTYTDNNFNISSTYAAIDGNYKYQYDKYNDVNRW 467 (660) Q Consensus 388 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~p~~~~~d~~~~~~~~ 467 (660) +++.++.+||+++++- ...+.++++.+.+.+++++...... +++.+.++++|+....+. .+..+. T Consensus 318 av~~~l~a~vkr~~~~----g~~~~aVlg~~~~~~~~~~~~~a~~----------~n~ervv~v~~~~~~~~~-~~~~~~ 382 (562) T protein:vir:63 318 AVHAEALQFVRDCSYN----GNPMRVFVGGGIGESMEQLFTRAIG----------LQNERAGLIGFSGTVKMD-DGRSLK 382 (562) T ss_pred HHHHHHHHHHHHHHhC----CCcEEEEecCCCCCCHHHHHHHhhh----------cCCCcEEEEecCeeEECC-CCceee Confidence 6788888899887752 2234455666677888888776553 678899999998765544 345566 Q ss_pred ech---HHHHHHHHHHhhccCCceecccceeeceeeecccccccCChhhhhhhccccceEEEEecCCeEEEecc-eec-- Q lcl|Aclame:pro 468 VPL---AADIAGLCARTDNISQPWMSPAGYNRGQILNVIKLAIETRQAQRDRLYQEAINPVTGTGGDGYVLYGD-KTA-- 541 (660) Q Consensus 468 ~p~---s~~~AG~~a~~d~~~g~~~span~~~~~v~~~~~~~~~~~~~e~~~Ln~~gin~i~~~~g~G~~~wG~-rT~-- 541 (660) +|+ ++++||++|+.| +++||.|+.+. . .+....+++.|++.|+++|++++++.++++.++|.. +++ T Consensus 383 ~~~~~~aa~vAGl~A~~~----~~~SlT~~~i~-~---~~v~~~~t~~e~~~li~~Gv~~l~~~~~~~v~~~~iv~~itT 454 (562) T protein:vir:63 383 MPGYMFAAQVAGLTCGLE----IGEAITFKNIA-I---ETLDTIYEGSQLDQLNESGIITAEFVRNRAVTNFRIVDDVTT 454 (562) T ss_pred echhHHHHHHHHHhhcCc----hhcCccceeec-c---ccccccCCHHHHHHHHhCCeEEEEEecCCcEEEEEeecccee Confidence 676 788889998887 78899999874 2 355678999999999999999999988888888754 332 Q ss_pred --CCCCcccceehhhHHHHHHHHHHHHHH-HHHhhcCCCHHHHHHHHHHHHHHHHHHHhcCCeeeEEEEEecCCCCHHHh Q lcl|Aclame:pro 542 --TSVPSPFDRINVRRLFNMVKTNIGSAS-KYRLFELNNAFTRSSFRTETSQYLQGIKALGGVYNFKVVCDTTNNTPAVI 618 (660) Q Consensus 542 --~~~~~~~~~i~vrR~~~~i~~~~~~~~-~~~v~epn~~~~~~~i~~~i~~~l~~l~~~gal~g~~v~~d~~~nt~~~i 618 (660) ..++..|++|+++|++|+|+++|++.+ +||+++||+...|.+|+..+..||.+||+.|+|.+|... +-+.++ T Consensus 455 ~t~~~~~~~~ki~viRv~D~i~~dir~~~~~~yiGk~Nn~~~r~~v~~~i~~~L~~l~~~gaI~~~~~~-----dv~v~~ 529 (562) T protein:vir:63 455 FNDKTDPVKSEIGVGEANDFLVSELKISLDNEYIGTKIIDTSASLVKNFVQSFLDRKKLAKEIQDYSPE-----EVQVVI 529 (562) T ss_pred cCCCCCchhhhhhhhHHHHHHHHHHHHHHHhcCCccccChHHHHHHHHHHHHHHHHHHhCCcccCCCcc-----ceEEEe Confidence 233567999999999999999998776 599999999999999999999999999999999998532 123345 Q ss_pred hCCEEEEEEEEEecCcceEEEEEEEEeecCccH Q lcl|Aclame:pro 619 DRNEFVATFYLQPARSINYITLNFVATATGADF 651 (660) Q Consensus 619 ~~G~~~~~i~~~p~~p~e~i~~~~~~~~~~~~~ 651 (660) ..+++++++.++|+.|||||++++....+-.+- T Consensus 530 ~~d~~~v~~~v~pv~~mekIy~ti~~~~~~~~~ 562 (562) T protein:vir:63 530 EGDVARISLTVFPIRSMKKIEVSLVYRQQILTA 562 (562) T ss_pred cCCEEEEEEEEEEcccceEEEEEEEEeeeeecC Confidence 677899999999999999999999988664444 No 35 >protein:vir:80488 Length: 562 # NCBI annotation: Tsh # Family: family:all:2449 # MgeID: mge:1883 # MgeName: A511 # Cross-refs: genbank:acc:YP_001468473;genbank:gi:157325048;genbank:GeneID:5601446 Probab=100.00 E-value=2e-65 Score=375.30 Aligned_cols=532 Identities=13% Similarity=0.087 Sum_probs=320.1 Q ss_pred CccccCceEEEEe-cCCcccccCCcCceeEEeecccCCCCccEEecCHHHHHHHcCCcCCcchhHHHHHHHHHhcCCEEE Q lcl|Aclame:pro 1 MALLSPGVELKET-TVQSTVVNNSTGTAALAGKFQWGPAFQIKQITDEVALVDMFGTPNTDTADYFMSAMNFLQYGNDLR 79 (660) Q Consensus 1 ~~~~~PGVyveE~-~~~~~i~gv~Ts~~afvG~~~~Gpv~~p~~i~s~~e~~~~fG~~~~~~~~~~~v~~~f~ngG~~~~ 79 (660) =.+..|||||||. |+.+++++++|++++|||.|++||+++|++|+||.||++.||+-.--.+..+|+..||.|||++|| T Consensus 9 ~~~~~pgv~~~~~~s~~~~~~~~~~~~~~~ig~a~~G~~~~~~~~~~~~~~~~~f~~g~l~~~i~~a~~~~~~~g~~~~~ 88 (562) T protein:vir:80 9 KPVSRPHTEISVDTSGIGGSSSGSEKILCLVGSATGGKPNAVYKVRNYSQAKSVFRSGELLDAIERAWNPGEGTGAGDIL 88 (562) T ss_pred CcccCCceEEEEecCCcccCCCCCCceEEEEEEeCCCCcceeEEEccHHHHHHHhcCCChHHHHHHhcccccccCceEEE Confidence 4567899999999 689999999999999999999999999999999999999999865444555666667789999999 Q ss_pred EEEccCccccccccccccccccccccccccccccceeEEeccccccccccceeeeecCCceeeEEeeccccccccccccc Q lcl|Aclame:pro 80 VVRAVDRDTAKNSSPVAGNINFTISSAGTNYRVGDKVVVKYSTDIIEPDGEVTSVDSDGKILNIFIPSGKIIAKAKEIGE 159 (660) Q Consensus 80 vvRv~~~~~~~~a~~~~~~l~~t~~~~g~~~~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~a~~~~~ 159 (660) +|||.+ +.+++...+.+.++....| .|++.+++....+..............+...+++...+.... T Consensus 89 ~~rv~~---a~~a~~~~~~~~~~~~~~g---~~~n~i~v~~~~~~~~~~~~~~v~~~~~~~~ev~~~~g~v~~------- 155 (562) T protein:vir:80 89 AMRVEE---AKEATFEAEGVKVSSTIYG---ADANDIQVALEDNTITGTKRLSIVFAKERVNQVYDNLGSIFS------- 155 (562) T ss_pred EEEcCC---CCcceEEecceEEEEeecc---cCCCceEEEEecCCCCCCcceEEEecCCcceEEeeccCceee------- Confidence 999944 3334444556778877777 477777776643332221112111112222333322111100 Q ss_pred ccccccceeeeeeccccccceeeeecccccccccccccccccccccccceeeeccccc-----------ccccccccccc Q lcl|Aclame:pro 160 YPELGSNWTAEMSGSSSGLSAVITIDSVVMDSGILLTEVETSEEAITSLTFQESIKKY-----------GVPGVVALYPG 228 (660) Q Consensus 160 ~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~a~~~g 228 (660) ....+............. .+.....+.... ...+...+......+ ......+.+++ T Consensus 156 ---------i~y~g~~~~a~~~i~~~~-~~~~a~~l~~~~---g~~~v~~~~l~~g~~~~~~~l~~~i~~~~~~tAky~g 222 (562) T protein:vir:80 156 ---------IKYKGTEASATFTVAVDP-VTFKATKLTLKA---GDKTVKEYDLGSGAYAETNVLISDINNLPDFEAKFFP 222 (562) T ss_pred ---------eeeccccccceeEEEecC-ccceEEEEEEec---CCcceeEEEeCCCccchhhhhhhhhccccceEEEecc Confidence 000000000000000000 000000000000 000000000000000 00001111122 Q ss_pred cccccccccccccccccccceeeeeeccccccccccceeeeeccccCcccceeecccCCcccceeEEeeccccccccccc Q lcl|Aclame:pro 229 ELGDQLEIEIVSKADYDKGASAQLKIYPDGGTRYSTAKAIFGYGPQTDDQYAIIVRRNDSVVQSVVLSTKRGERDIYGSN 308 (660) Q Consensus 229 ~~g~~i~v~i~s~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~e~~~v~~~~~~~~~~~~~ 308 (660) .-++.+.+..... .. .... .. ....+....++ T Consensus 223 ~~~n~i~~~~~d~--------------------------~~--------~~~~--kt-----~~~~v~~~~~d------- 254 (562) T protein:vir:80 223 IGDKNLTTDNFDA--------------------------QI--------DVDI--KT-----KEAYVKAVGGD------- 254 (562) T ss_pred cCCceeeeccccc--------------------------ch--------hhhc--cc-----ceeeeeehhhh------- Confidence 1122111100000 00 0000 00 00000000000 Q ss_pred cchhhhhhcCCceEEEEEecC-CCcccceeeeeeccccccccccchhhhhhhhhhhhhhhcCcceeecccccCCchhhHH Q lcl|Aclame:pro 309 IFIDDFFAKGASNYIFATAQG-WPKGFSGVIKLNGGLSSNETVEAGDLMEAWDLFADRESVNAQLFIAGSCAGESLEVAS 387 (660) Q Consensus 309 ~~~~~~~~~g~~~~~~~~~~~-~~~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 387 (660) ....+....++...... ..........|.||.++.... ++..+++.|+. .+...+.+. .... T Consensus 255 ----~~~~~~~n~~v~~~~~~~~~la~~~~~~LtGG~dG~~~~---~~~dal~~Le~---~~~~~i~~~-------t~d~ 317 (562) T protein:vir:80 255 ----IEKQTAYNGYVEFEFDRSKEIANFPLTKLTGGDNGTIPE---SWADKFSYFAN---EGGYYLVPL-------TSKQ 317 (562) T ss_pred ----hhhcccccceEEEEeccCccccccceeeeeCCCCCCccc---cHHHHHHHHHh---CCcEEEEec-------CCCh Confidence 00011112222222211 111222346788999875432 33444444443 333333332 1234 Q ss_pred HHHHHHHHHHhhccCeEEEeccccceEEecCCCCcHHHHHHHhhhcccccccccccCcceEEEEechhccccccccccee Q lcl|Aclame:pro 388 TVQKHVVAIGDSRQDCLVLCSPPRAAVVGIPVNRAVDNLVDWRTASGTYTDNNFNISSTYAAIDGNYKYQYDKYNDVNRW 467 (660) Q Consensus 388 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~p~~~~~d~~~~~~~~ 467 (660) +++..+.+||+++++. ..++.+++..+.+.+++++...... +++.+.++++|+..+.+. .+..+. T Consensus 318 ai~~~~~a~vkr~r~~----g~~~~aVvg~~~~~~~~~~~~~a~~----------~n~e~vv~v~~~~~~~~~-~~~~~~ 382 (562) T protein:vir:80 318 AVHAEALQFVRDCSYN----GNPMRVFVGGGIGESMEQLFTRAIG----------LQNERAGLIGFSGTVKMD-DGRSLK 382 (562) T ss_pred HHHHHHHHHHHHHHhC----CCeEEEEecCCCCCCHHHHHHHhhh----------cCCCeEEEEecCeeEECC-CCceee Confidence 6788889999888762 2234455666677888888876654 778899999998765544 344555 Q ss_pred ech---HHHHHHHHHHhhccCCceecccceeeceeeecccccccCChhhhhhhccccceEEEEecCCeEEEec----cee Q lcl|Aclame:pro 468 VPL---AADIAGLCARTDNISQPWMSPAGYNRGQILNVIKLAIETRQAQRDRLYQEAINPVTGTGGDGYVLYG----DKT 540 (660) Q Consensus 468 ~p~---s~~~AG~~a~~d~~~g~~~span~~~~~v~~~~~~~~~~~~~e~~~Ln~~gin~i~~~~g~G~~~wG----~rT 540 (660) .|| ++++||++|+.+ +++||.|+.+.+ .+....+++.|++.|+++|++++++.++++.++|. -.| T Consensus 383 ~~~~~~aa~vAGl~Ag~~----~~~S~T~~~i~~----~~v~~~lt~~e~~~li~~G~l~l~~~~~~~v~~~riv~~itT 454 (562) T protein:vir:80 383 MPGYMFAAQVAGLTCGLE----IGEAITFKNIAI----ETLDTIYEGSQLDQLNESGIITAEFVRNRAVTNFRIVDDVTT 454 (562) T ss_pred echhHHHHHHHHHHhcCc----cccCccceeecc----ccccccCCHHHHHHHHhCCeEEEEEecCCcEEEEEeecccee Confidence 566 789999999987 778999998753 24567789999999999999999998888777772 223 Q ss_pred c-CCCCcccceehhhHHHHHHHHHHHHHH-HHHhhcCCCHHHHHHHHHHHHHHHHHHHhcCCeeeEEEEEecCCCCHHHh Q lcl|Aclame:pro 541 A-TSVPSPFDRINVRRLFNMVKTNIGSAS-KYRLFELNNAFTRSSFRTETSQYLQGIKALGGVYNFKVVCDTTNNTPAVI 618 (660) Q Consensus 541 ~-~~~~~~~~~i~vrR~~~~i~~~~~~~~-~~~v~epn~~~~~~~i~~~i~~~l~~l~~~gal~g~~v~~d~~~nt~~~i 618 (660) . ..++..|++|+++|++|+|+++|++.+ +||+++||+...|.+|+..+..||.+||++|+|.+|... +-+.+. T Consensus 455 ~t~~~~~~~~ki~viRv~D~i~~dir~~~~~~yIGk~Nn~~~r~~v~~~i~~~L~~l~~~gaI~~~~~~-----dv~v~~ 529 (562) T protein:vir:80 455 FNDKTDPVKSEIGVGEANDFLVSELKISLDNEYIGTKIIDTSASLVKNFVQSFLDRKKLAKEIQDYSPE-----EVQVVI 529 (562) T ss_pred ccCCCCchhhhhhhhHHHHHHHHHHHHHHHhcCCccccChHHHHHHHHHHHHHHHHHHhCCcccCCCcc-----ceEEEe Confidence 2 244568999999999999999998887 689999999999999999999999999999999998532 123345 Q ss_pred hCCEEEEEEEEEecCcceEEEEEEEEeecCccH Q lcl|Aclame:pro 619 DRNEFVATFYLQPARSINYITLNFVATATGADF 651 (660) Q Consensus 619 ~~G~~~~~i~~~p~~p~e~i~~~~~~~~~~~~~ 651 (660) .+++++|++.++|+.|||||++++....+-.+- T Consensus 530 ~~d~~~v~~~v~Pv~~mekIy~ti~~~~~~~~~ 562 (562) T protein:vir:80 530 EGDIARISLTVFPIRSMKKIEVSLVYRQQILTA 562 (562) T ss_pred cCCEEEEEEEEEEcccceEEEEEEEEEeeeecC Confidence 678899999999999999999999988764444 No 36 >protein:vir:102819 Length: 648 # NCBI annotation: tail sheath protein # Family: family:all:2449 # MgeID: mge:1610 # MgeName: YS40 # Cross-refs: genbank:acc:YP_874082;genbank:gi:118197689;genbank:GeneID:4496011 Probab=100.00 E-value=4.5e-65 Score=373.37 Aligned_cols=597 Identities=12% Similarity=0.042 Sum_probs=295.3 Q ss_pred Cccc---------cCceEEEEe-cCCcccccCCcCceeEEeecccCCCCccEEecCHHHHHHHcCCcCCcchhHHHHHHH Q lcl|Aclame:pro 1 MALL---------SPGVELKET-TVQSTVVNNSTGTAALAGKFQWGPAFQIKQITDEVALVDMFGTPNTDTADYFMSAMN 70 (660) Q Consensus 1 ~~~~---------~PGVyveE~-~~~~~i~gv~Ts~~afvG~~~~Gpv~~p~~i~s~~e~~~~fG~~~~~~~~~~~v~~~ 70 (660) |+.. +|||||||+ ++.++|+||+|++++|||.|+|||+|+|++|+||.||++.||+ .+|.|++++| T Consensus 1 ma~~~yf~~~~~~~PGVyvee~~sg~~~i~gv~tsva~fvG~a~~Gp~~~p~~v~s~~~~~~~fgg----g~l~~av~~~ 76 (648) T protein:vir:10 1 MAISVYFDGKLIKQLGAYVKTDLSAVKQINGVGTGIVALLGLAEGGETYKPYRLTSFAEAVSIFKG----GPLLEHIKAA 76 (648) T ss_pred CeeeeeeCCCCccCCceEEEEeccccccccCCCCceEEEEEeeCCCCCceeEEecCHHHHHHHhcC----ccHHHHHHHH Confidence 5443 599999999 5899999999999999999999999999999999999999996 4699999999 Q ss_pred HHhcCCEEEEEEccCccccccccccccccccccccccccccccceeEEecc--ccccccccceeeeecC-CceeeEEeec Q lcl|Aclame:pro 71 FLQYGNDLRVVRAVDRDTAKNSSPVAGNINFTISSAGTNYRVGDKVVVKYS--TDIIEPDGEVTSVDSD-GKILNIFIPS 147 (660) Q Consensus 71 f~ngG~~~~vvRv~~~~~~~~a~~~~~~l~~t~~~~g~~~~~~~~~~v~~~--~~~~~~~~~v~~~~~~-~~~~~~~~~~ 147 (660) |.|||++||+||+.+.+.+ +...+.+.+++..+| .|++.+++++. .+......++...... +......... T Consensus 77 F~nGg~~~~~vRv~~~~~a---~~~~~~~~~~a~~~g---~~gn~i~~~v~~~~~~~~~~~~l~v~~~~~~~~~d~~v~~ 150 (648) T protein:vir:10 77 FIGGAGEVVAVRIGNPTTA---SVSIPVAQNTSDTSP---ANLNFVSYEASTRSNQIYVSFDLDENFTSANEADDTIIFT 150 (648) T ss_pred HhCCCcEEEEEEcCCCccc---ceecceeEEeecccC---CCCCceEEEEEEcCCCcCceeEEEEEecCCCcccceeEEE Confidence 9999999999999775543 334456777777777 36776654432 2222211112111111 1110000000 Q ss_pred ccccccccccccccccccceeeeeeccc---cccceeeeecccccccccccccccccccccccceeeecccccccccccc Q lcl|Aclame:pro 148 GKIIAKAKEIGEYPELGSNWTAEMSGSS---SGLSAVITIDSVVMDSGILLTEVETSEEAITSLTFQESIKKYGVPGVVA 224 (660) Q Consensus 148 ~~~~~~a~~~~~~~~~~~~~~~~~~~~~---~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 224 (660) .... ....... ......+....... ......... +... +............................. T Consensus 151 i~~~-~~~y~gt--~~~~t~~v~~~~~~~~~~~~~~~~~~-----~~~~-v~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 221 (648) T protein:vir:10 151 IYQK-HPDFSVT--RETFTFPRKFTTPTVLVKRGSTLFFV-----DRSI-VNAALAAGPAFQTALINLLKEQLQPTDVVQ 221 (648) T ss_pred eccC-CCccccc--ceeccccccccccccccccccceeec-----Cccc-hhhhhccCccchhhhhhchhhhhhhhhhhe Confidence 0000 0000000 00000000000000 000000000 0000 000000000000000000000000000000 Q ss_pred cccccccccccccccccccccccceeeeeeccccccccccceeeeeccccCcccceeecccCCcccceeEEe--eccccc Q lcl|Aclame:pro 225 LYPGELGDQLEIEIVSKADYDKGASAQLKIYPDGGTRYSTAKAIFGYGPQTDDQYAIIVRRNDSVVQSVVLS--TKRGER 302 (660) Q Consensus 225 ~~~g~~g~~i~v~i~s~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~e~~~v~--~~~~~~ 302 (660) ..+. .+.....+. .................. ...........-........+.+...-.....-.+. ...+.. T Consensus 222 ~~~~--s~~~~~d~~--~~~~~~~a~~~~~~~~~~-~~~~~~~~gd~~~~~~~~~~~~~~~tp~~~~~~~~~~~~~~~~~ 296 (648) T protein:vir:10 222 IFDA--SDTNPVDIP--LGLFVYEVLYGGLFGFTK-SRLVKTSFGTVDDLLSNPLLFNLSATPFFDGSDYQDYTSLSDPA 296 (648) T ss_pred eccc--ccccccccc--cccccccccchhhhcCCc-chhhhhhhccccccccccceecccccccccccceeeeecccccc Confidence 0000 000000000 000000000000000000 000000000000000000000000000000000000 000000 Q ss_pred cccccccchhhhhhcCCceEEEEEecCCCcccceeeeeecccccccccc---------chhhhhhhhhhhhhhhcCccee Q lcl|Aclame:pro 303 DIYGSNIFIDDFFAKGASNYIFATAQGWPKGFSGVIKLNGGLSSNETVE---------AGDLMEAWDLFADRESVNAQLF 373 (660) Q Consensus 303 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gg~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~ 373 (660) +..... ....+........+... ......|+||.++..+.. ..++..+++.++..+. .++ T Consensus 297 ~~~~v~-------~~~~~~l~~~~~~p~~~-~~~~t~L~GGtdG~~p~s~~~~~~~~~~~d~~d~l~~~~~~~~---~~i 365 (648) T protein:vir:10 297 NWFAKD-------AYTINHLVDTTINPHIL-ATRIFSLSGGTNGDDGTGYYQTAVSNYINIWSQGLATLEEEEV---NFV 365 (648) T ss_pred ceeeee-------ccchhhcccccccCccc-ccccceecccccCCCcccccccccccchhhHHHHhhhccCCCc---eEE Confidence 000000 00001111111111100 011225889999877633 3445555555544443 333 Q ss_pred ec------ccccCCchhhHHHHHHHHHHHHhhccCeEEEecccc--ceEEecCCCCcHHHHHHHhhhcc--ccccccccc Q lcl|Aclame:pro 374 IA------GSCAGESLEVASTVQKHVVAIGDSRQDCLVLCSPPR--AAVVGIPVNRAVDNLVDWRTASG--TYTDNNFNI 443 (660) Q Consensus 374 ~~------~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 443 (660) ++ ...........++++.++++||+.+.-+- =-+.++ ..++..+++.+..+....+.... ......... T Consensus 366 vp~~~~~~~~~~~~~lt~~q~i~a~a~shv~~~s~~~-~~~~r~~~~~~vg~~~~es~~~se~~~~~~~~~~~~a~~~~~ 444 (648) T protein:vir:10 366 IPAYKFTNVTQLNDRLTIFKGIASTFLSHVQTMSQVN-RRKARVGVFGLPAPSPNESVTASEYLYNRNILNTISAMFGGT 444 (648) T ss_pred EeecccccccccccccCCccchHHHHHHHHHHhhhcc-ccccccCeEEEeCCCCchhHHHHHHHhhhhcccccceeeeec Confidence 33 12222233455778888889987653110 001111 22233445555544433332211 111000011 Q ss_pred Ccc-eEEEEechhcccccccccceeech---HHHHHHHHHHhhccCCceecccceeeceeeecccccccCChhhhhhhcc Q lcl|Aclame:pro 444 SST-YAAIDGNYKYQYDKYNDVNRWVPL---AADIAGLCARTDNISQPWMSPAGYNRGQILNVIKLAIETRQAQRDRLYQ 519 (660) Q Consensus 444 ~s~-~~~~~~p~~~~~d~~~~~~~~~p~---s~~~AG~~a~~d~~~g~~~span~~~~~v~~~~~~~~~~~~~e~~~Ln~ 519 (660) +-. .+...+.+.+.. .+++...+|| .+++||+++++ .+++||.||++.+.. ++..++++++|++.|++ T Consensus 445 d~~~~~~~~~~~~~~~--~~G~~~~~p~~~~Aa~VAGl~a~l----~~~~s~T~k~i~~~~--id~~~~~t~~qld~L~~ 516 (648) T protein:vir:10 445 DRAQAVVFPFYSNVFN--DEGKVELLGGEFFASYVAGMHANR----EPQDSITFLPISGIG--AEPLYNWTYTQKDDLIS 516 (648) T ss_pred CCceEEeecccceeEC--CCCcEEecchhhHHHHHHhhhhcc----ccccCcccceeeccc--cccccCCCHHHHHHHhc Confidence 111 222223333322 2456666788 67788888876 588899999986432 34447899999999999 Q ss_pred ccceEEEEecCC----eEEEecceecC--CCCcccceehhhHHHHHHHHHHHHHH-HHHhhcCCCHHHHHHHHHHHHHHH Q lcl|Aclame:pro 520 EAINPVTGTGGD----GYVLYGDKTAT--SVPSPFDRINVRRLFNMVKTNIGSAS-KYRLFELNNAFTRSSFRTETSQYL 592 (660) Q Consensus 520 ~gin~i~~~~g~----G~~~wG~rT~~--~~~~~~~~i~vrR~~~~i~~~~~~~~-~~~v~epn~~~~~~~i~~~i~~~l 592 (660) +||+||.+.+++ ++++-..-|.. .++..|+.|+++|++||+.+.|++.+ .+|+++||+...|.+||+.|.+|| T Consensus 517 ~Gv~~ie~~~~~~~~~~~rvv~gITT~~~~~~~~~~eisv~ri~D~l~~~vr~~l~~~fIG~~n~~~~~~~ik~~i~~~L 596 (648) T protein:vir:10 517 NRVLFVEKVKTSFGGIVYRIHHNPTTWLGPVTQGFQEFVLRRIDDFLQSYVYKNLQEQFIGRKSYGRKTENDIKVYTEAL 596 (648) T ss_pred CCcEEEEEecCCcceeeEEEeccceeecCCCCcceeeeeeeehhhHHHHHHHHHHhhhcCcccccHHHHHHHHHHHHHHH Confidence 999999988765 34454444432 34467999999999999999998744 599999999999999999999999 Q ss_pred HHHHhcCCeeeEE---EEEecCCCCHHHhhCCEEEEEEEEEecCcceEEEEEEEEeecCcc Q lcl|Aclame:pro 593 QGIKALGGVYNFK---VVCDTTNNTPAVIDRNEFVATFYLQPARSINYITLNFVATATGAD 650 (660) Q Consensus 593 ~~l~~~gal~g~~---v~~d~~~nt~~~i~~G~~~~~i~~~p~~p~e~i~~~~~~~~~~~~ 650 (660) .++++.++|++|. |.++ ++++++++++.++|++|++||.+++..+-. .+ T Consensus 597 ~~~~~~~~I~~y~~~~v~~~--------~~~~vv~V~~~v~Pv~~i~~I~vti~it~~-~~ 648 (648) T protein:vir:10 597 LSNLVGKQIVAYKDVKVTSN--------EDKTVYYVEFFYQPVTEIKFILVTMKVTFD-LE 648 (648) T ss_pred hhHhhcCcccCcccceEEEE--------ecCCEEEEEEEEEecceeeEEEEEEEEEec-cC Confidence 9999999999974 3332 356899999999999999999888776533 22 No 37 >protein:vir:79798 Length: 717 # NCBI annotation: tail sheath subunit # Family: family:all:12069 # MgeID: mge:1874 # MgeName: 0305phi8-36 # Cross-refs: genbank:acc:YP_001429630;genbank:gi:156564120;genbank:GeneID:5525563 Probab=100.00 E-value=1.3e-64 Score=370.85 Aligned_cols=615 Identities=13% Similarity=0.088 Sum_probs=296.4 Q ss_pred Cc----c-ccCceEEEEecC----CcccccCCcCceeEEeecccCCCCccEEecCHHHHHHHcCCcCCcchhH------H Q lcl|Aclame:pro 1 MA----L-LSPGVELKETTV----QSTVVNNSTGTAALAGKFQWGPAFQIKQITDEVALVDMFGTPNTDTADY------F 65 (660) Q Consensus 1 ~~----~-~~PGVyveE~~~----~~~i~gv~Ts~~afvG~~~~Gpv~~p~~i~s~~e~~~~fG~~~~~~~~~------~ 65 (660) |. | -.||+-+.-.|+ -+..+.-.|-...+.|.+--|||.+||+|+-... +..||+....|-.+ - T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 79 (717) T protein:vir:79 1 MAGFDQYQAIPGHNARFKDGNLNLKSDPNPRETESVVLLGTATDGPVMQPVRVTPETA-YNIFGKVAHENGVYNGATLLP 79 (717) T ss_pred CCchhhhhcCCCceeeeecCceecCCCCCccccceEEEEeeccCCcccCceeeChhHH-HhhhhhhhhhcccccchhhhH Confidence 32 2 379999986654 2455667787788999999999999999995554 59999866554332 3 Q ss_pred HHHHHHHhcCCEEEEEEccCccccc---------ccc-----cc-----ccccccccccccccccccceeEEeccccccc Q lcl|Aclame:pro 66 MSAMNFLQYGNDLRVVRAVDRDTAK---------NSS-----PV-----AGNINFTISSAGTNYRVGDKVVVKYSTDIIE 126 (660) Q Consensus 66 ~v~~~f~ngG~~~~vvRv~~~~~~~---------~a~-----~~-----~~~l~~t~~~~g~~~~~~~~~~v~~~~~~~~ 126 (660) +....+..|-.....+|+..-+..+ ... -. .+++.+|...|..+ .+..+.-++...-... T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 158 (717) T protein:vir:79 80 KFEELWAAGNRDIRLMRTTGVNAVSSLLGTSYSKNSKEVAEDKLGGAQARGNVAATFTLPNGG-IVEATFLLKARGVIIP 158 (717) T ss_pred HHHHHHhcCCcceEEEEecchhHHHHHhhcccccchhhHHHHhhcccccccceEEEEEcCCCc-eeeeeeeeeecceEeC Confidence 3445566788889999986433211 100 00 11222232222111 0111111111000011 Q ss_pred cccceeeeecCCceeeEEeecccccccccccccccccccceeeeeeccccccceeeeecccccccccccccccccccccc Q lcl|Aclame:pro 127 PDGEVTSVDSDGKILNIFIPSGKIIAKAKEIGEYPELGSNWTAEMSGSSSGLSAVITIDSVVMDSGILLTEVETSEEAIT 206 (660) Q Consensus 127 ~~~~v~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (660) ++...+.+......+.-..++.........+......-..+.........+-+..+.+..-.++-..........+. T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 235 (717) T protein:vir:79 159 PNNYTLDVGTEEDMKAGTQPTFAQVLLNENVADMESEITVSYEFTYKDAQGETKTSEVLDNNTDKDGKPMIAKGADV--- 235 (717) T ss_pred CCcceEeccChhhhhcCCCchhhhhhhccchhhccceeEEEEEEEeecccCcchhhhhhcCCCCCCCceeEEecccc--- Confidence 11111111111001111111111111111111110000000000011111111111111111111111000000000 Q ss_pred cceeeeccccccccccc--------ccccccccccccccccccccccccceeeeeecccc---ccccccceeeeeccccC Q lcl|Aclame:pro 207 SLTFQESIKKYGVPGVV--------ALYPGELGDQLEIEIVSKADYDKGASAQLKIYPDG---GTRYSTAKAIFGYGPQT 275 (660) Q Consensus 207 ~~~~~~~~~~~~~~~~~--------a~~~g~~g~~i~v~i~s~~~~~~~~~~~~~v~~~~---~~~~~~~~~~~~~~~~~ 275 (660) +.....-.+...... +......++.+++...+.-... .++. .....+- ..+-.--+.+ .+... T Consensus 236 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~--~~g~~ 309 (717) T protein:vir:79 236 --TIKLEHVALAGLKLYADGIEVVDAKAFTVAGDQLTIHSNSKMKLG-ASLE-AQYAYNLVEVIQPVIELESI--FGGGV 309 (717) T ss_pred --eeehhhhhhhhhHHhhcchhhhhhhheeeecceEEEEecCCcccc-hhhH-HHHHhhHHHhhccceEEeec--ccCce Confidence 000000000000000 0001111111111111000000 0000 0000000 0000000000 00011 Q ss_pred cccceeecccCC-cccceeEEeecccc-----------ccccccccchhhhhhcCC----------ceEEEEEecCCCcc Q lcl|Aclame:pro 276 DDQYAIIVRRND-SVVQSVVLSTKRGE-----------RDIYGSNIFIDDFFAKGA----------SNYIFATAQGWPKG 333 (660) Q Consensus 276 ~~~~~~~v~~~g-~~~e~~~v~~~~~~-----------~~~~~~~~~~~~~~~~g~----------~~~~~~~~~~~~~~ 333 (660) -..+.+.+..++ ...-+++.....-. .++..-....+....++- ..-......... T Consensus 310 ~n~~~~~v~~~D~~~~~~~t~~~~~~g~~~~~pl~~ts~dy~~~~~~vdgI~~~~~~~V~~~g~~s~a~a~~~~g~~s-- 387 (717) T protein:vir:79 310 YNDIMRKVESKDGAVTVTITKPESKRGMISEDPLVFKSGDYTNFKMLVDAINNHPFNNVVRARTKPEFEATFTSTLQA-- 387 (717) T ss_pred eeeeeeEEecCCceEEEEEecccccCcceeccccccccCceeeeeeeecccccCchhheeeeecccccceeeeecccC-- Confidence 111112222222 11111111000000 000000000000000000 000000000000 Q ss_pred cceeeeeeccccccccccchhhh------------hhhhhhhhhhhcCcceeecccccCC--chhhHHHHHHHHHHHHhh Q lcl|Aclame:pro 334 FSGVIKLNGGLSSNETVEAGDLM------------EAWDLFADRESVNAQLFIAGSCAGE--SLEVASTVQKHVVAIGDS 399 (660) Q Consensus 334 ~~~~~~~~gg~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~v~~~~~~~~~~ 399 (660) .....+.||.++.......-+. .....+..++..++.+++++....+ ..+....++.++.+||+. T Consensus 388 -~d~a~f~Gg~dgl~~~~ee~Y~~lGgk~~d~g~lt~~aays~LE~~dVDlVil~ga~adtt~ga~~d~va~alad~caa 466 (717) T protein:vir:79 388 -AADAKFSGGKDELSLDKEEMYKRLGGEKNEEGFVTKQGAYQYLENYEVDYVIPLGVHADTKLIGKYDDFAYQLALACAV 466 (717) T ss_pred -chhhccCCCccccccchhhhhccccccccccccccchhhhhhcCcceeEEEEecCccccccccchhhhHHHHHHHHHHH Confidence 0111244444443332111110 0012333344455666555544332 223455678889999976 Q ss_pred cc----CeEEEeccccceEEecCCCCcHHHHHHHhhhcccccc-----------------cccccCcceEEEEechhccc Q lcl|Aclame:pro 400 RQ----DCLVLCSPPRAAVVGIPVNRAVDNLVDWRTASGTYTD-----------------NNFNISSTYAAIDGNYKYQY 458 (660) Q Consensus 400 ~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~s~~~~~~~p~~~~~ 458 (660) +. .++.+++. ..|.......+.+|+........ ....+ +.|..+++++..+. T Consensus 467 lSal~r~ai~VI~l------~sp~D~~~AtVe~~~~kLs~~Aaa~~~~d~~~a~a~~~~~~~idi-s~y~~vv~~~~~iv 539 (717) T protein:vir:79 467 MSHYNSVTIGIIPT------TTPSDISLAGVEEHVKKLENYANEFYMRDRFGNIIFDADRNKIDL-GQFIEVVAGPDFIV 539 (717) T ss_pred hhhccccceeeecc------ccccccchhhHHHHHHHHHhhhhhhhhhcchhccccccccccccc-cceeeeeecceeEE Confidence 53 22222221 12333333333344332211100 00011 23444444444444 Q ss_pred ccccccceeechHHHHHHHHHHhhccCCceecccceeeceeeecccccccCChhhhhhhccccceEEEEecCCeEEEecc Q lcl|Aclame:pro 459 DKYNDVNRWVPLAADIAGLCARTDNISQPWMSPAGYNRGQILNVIKLAIETRQAQRDRLYQEAINPVTGTGGDGYVLYGD 538 (660) Q Consensus 459 d~~~~~~~~~p~s~~~AG~~a~~d~~~g~~~span~~~~~v~~~~~~~~~~~~~e~~~Ln~~gin~i~~~~g~G~~~wG~ 538 (660) .+..+..+..||+|++||+ |..+|+||||+|+++.++ .+++..+++.|++.||++|||||++++++|+++||+ T Consensus 540 ~~~~~~~~~~p~AG~vAGl----dA~rGVwkSPANk~I~GV---vgLa~~lT~sE~d~Ln~aGIntIr~~~GrGirVWGa 612 (717) T protein:vir:79 540 RNTRLGQMASTPDASYIGM----VSQLKTQSAPTNKPLPSV---TALRYTYSANQLNRLTKARFATFKYKQDGSIGVVDA 612 (717) T ss_pred EcCCCceeecCHHHHHHHH----HhcCCcccccccceeccc---ccCcccCCHHHHHHHhhCCeEEEEEeCCceEEEEee Confidence 5556666777886665555 556799999999986554 566888999999999999999999999999999999 Q ss_pred eecCCCCcccceehhhHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhcCCeeeEEEEEecCCCCHHHh Q lcl|Aclame:pro 539 KTATSVPSPFDRINVRRLFNMVKTNIGSASKYRLFELNNAFTRSSFRTETSQYLQGIKALGGVYNFKVVCDTTNNTPAVI 618 (660) Q Consensus 539 rT~~~~~~~~~~i~vrR~~~~i~~~~~~~~~~~v~epn~~~~~~~i~~~i~~~l~~l~~~gal~g~~v~~d~~~nt~~~i 618 (660) ||+++++++|+||++||++++|+++|++.++|+|||||++.+|.+|+.+|++||++||++|+|.||++++ +||++++ T Consensus 613 RTtasd~sdWryInVRRl~D~Ie~sIr~al~~yVgEPNd~~tr~~Ik~sI~afL~~L~r~GAI~Gykvdv---tnT~~di 689 (717) T protein:vir:79 613 PTSAHAGSDYTRLSTARIVKEAVNAVREVADPFIGEPNDTGNRNALTAAVDKRLSKMIENKALLGFDFRL---VVTPQQE 689 (717) T ss_pred eecCCCCcccceeehhhhHHHHHHHHHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHhcCceecceeeE---ecChhHh Confidence 9999988899999999999999999999999999999999999999999999999999999999999865 7999999 Q ss_pred hCCEEEEEEEEEecCcceEEEEEEEEee Q lcl|Aclame:pro 619 DRNEFVATFYLQPARSINYITLNFVATA 646 (660) Q Consensus 619 ~~G~~~~~i~~~p~~p~e~i~~~~~~~~ 646 (660) ++|+++|+|+++|++|||||+|+++... T Consensus 690 ~~G~l~V~I~vaPv~PaEfI~ititITA 717 (717) T protein:vir:79 690 LLGEGSIELSLEAPNELRRLTTIVSLSA 717 (717) T ss_pred hCCEEEEEEEEEecCcccEEEEEEEEeC Confidence 9999999999999999999999999987 No 38 >protein:vir:80779 Length: 569 # NCBI annotation: putative tail sheath protein # Family: family:all:2449 # MgeID: mge:1885 # MgeName: phiEF24C # Cross-refs: genbank:acc:YP_001504132;genbank:gi:158079319;genbank:GeneID:5666428 Probab=100.00 E-value=3.4e-63 Score=363.03 Aligned_cols=548 Identities=14% Similarity=0.111 Sum_probs=313.4 Q ss_pred CccccCceEEEEe-cCCcccccCCcCceeEEeecccCCCCccEEecCHHHHHHHcCC--cCCcchhHHHHHHHHHhcCCE Q lcl|Aclame:pro 1 MALLSPGVELKET-TVQSTVVNNSTGTAALAGKFQWGPAFQIKQITDEVALVDMFGT--PNTDTADYFMSAMNFLQYGND 77 (660) Q Consensus 1 ~~~~~PGVyveE~-~~~~~i~gv~Ts~~afvG~~~~Gpv~~p~~i~s~~e~~~~fG~--~~~~~~~~~~v~~~f~ngG~~ 77 (660) =....|||||+|. ++.+++++++|++++|||.|++||.|+|++|+||.||.+.||+ +.+-.++.|....||.|||++ T Consensus 9 ~~~~~Pgv~~~~~~~~~~~~~~~~~~~~~~ig~a~~G~~~~~~~~~~~~~~~~~f~~g~l~~a~~~a~~~~~~~~~~~~~ 88 (569) T protein:vir:80 9 KKVSRPHTEITVDTSGIGGSSSSSDKTLMLVGSAKGGKPDTVYRFRNYQQAKQVLRSGDLLDAIELAWNASDVNTASAGD 88 (569) T ss_pred CccccCceEEEEecCCCcCCCCCCceeEEEEEEeCCCCCceeEEecCHHHHHHHhcCCchhHHHHhhccCccccccCceE Confidence 3456999999999 5899999999999999999999999999999999999999976 333444555555667899999 Q ss_pred EEEEEccCccccccccccccccccccccccccccccceeEEeccccccccccceeeeecCCceeeEEeeccccccccccc Q lcl|Aclame:pro 78 LRVVRAVDRDTAKNSSPVAGNINFTISSAGTNYRVGDKVVVKYSTDIIEPDGEVTSVDSDGKILNIFIPSGKIIAKAKEI 157 (660) Q Consensus 78 ~~vvRv~~~~~~~~a~~~~~~l~~t~~~~g~~~~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~a~~~ 157 (660) ||++|+.+.. +++...+.+.++....|. |++.+.+....+..............+...+.+. T Consensus 89 ~~~~rv~~a~---~a~~~~~~~~~~a~~~g~---~~n~i~v~l~~~~~~~~~~~~v~~~~~~~~~~~~------------ 150 (569) T protein:vir:80 89 ILAVRVEDAK---NATLTKGGLTFASTIYGV---DANEIQVALEDNNLTHTKRLTVAFSKDGYKKVFD------------ 150 (569) T ss_pred EEEEEcCCCe---eeeeeccceeeeeeeccC---CCceEEEEEecCcCCcceeeEEeeecCCCccccc------------ Confidence 9999994333 334444556666666663 6777766653332211111111100011111110 Q ss_pred ccccccccceeeeeeccccccceeeeecccccccccccccccccccccccceeeeccccccccccccccccccccccccc Q lcl|Aclame:pro 158 GEYPELGSNWTAEMSGSSSGLSAVITIDSVVMDSGILLTEVETSEEAITSLTFQESIKKYGVPGVVALYPGELGDQLEIE 237 (660) Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~g~~g~~i~v~ 237 (660) ..+........+....... ...+..++.+...+......+.......+...........+ ..+... T Consensus 151 ----~ig~v~si~ytg~~~~a~~-~~~~~~~~~~a~~l~~~~g~~~~~~~~v~~~~~~~~~~~~~---------~~lv~~ 216 (569) T protein:vir:80 151 ----NLGKIFSIQYKGSEAQANF-TIAQDSISKKATTLTLNVGSEPESTTEVMKYELGQGVYSET---------NVLVSA 216 (569) T ss_pred ----cccceeeEEEeeccccceE-EeecCcCcceeEEEEEEecCCcceeEEEEeeccCCccchhh---------hhhhhh Confidence 0000000000000000000 00000011110000000000000000000000000000000 000000 Q ss_pred ccccccccccceeeeeeccccccccccceeeeeccccCcccceeecccCCcccceeEEeeccccccccccccchhhhhhc Q lcl|Aclame:pro 238 IVSKADYDKGASAQLKIYPDGGTRYSTAKAIFGYGPQTDDQYAIIVRRNDSVVQSVVLSTKRGERDIYGSNIFIDDFFAK 317 (660) Q Consensus 238 i~s~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~e~~~v~~~~~~~~~~~~~~~~~~~~~~ 317 (660) + ...+..+.+. ...+ +..... ...+.. ..+.+..... ............. T Consensus 217 ~-------------------~~~~~f~a~~-~~~~---~~~~~~-~~~d~~--~~~~~~t~~~----~~~~~~~di~~~~ 266 (569) T protein:vir:80 217 I-------------------NSLPDWEAKF-FPIG---DKNLPT-DALEAV--TKVDVKTEAV----FVGALAGDIAKQL 266 (569) T ss_pred c-------------------CCccCceEEE-EecC---CCccee-hhccch--hheeccccce----eeehhHHHHHHhh Confidence 0 0000000000 0000 000000 000000 0000000000 0000000000001 Q ss_pred CCceEEEEEecCC-CcccceeeeeeccccccccccchhhhhhhhhhhhhhhcCcceeecccccCCchhhHHHHHHHHHHH Q lcl|Aclame:pro 318 GASNYIFATAQGW-PKGFSGVIKLNGGLSSNETVEAGDLMEAWDLFADRESVNAQLFIAGSCAGESLEVASTVQKHVVAI 396 (660) Q Consensus 318 g~~~~~~~~~~~~-~~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 396 (660) ....++.....+. .........|.||.|+... .++..+++.++ ..+-..+.+. ....+++.++.+| T Consensus 267 ~~~~~v~~~~~~~~~l~~~~~~~LtGG~dG~~~---~~~~~~l~~le---~~~~~~i~~~-------t~d~av~~~l~a~ 333 (569) T protein:vir:80 267 EYNDYVTVAVDATKPVEDFELTNLTGGSDGTAP---ESWANKFPLLA---NEGGYYLVPL-------TDKQAVHSEALAF 333 (569) T ss_pred cCCceEEEEecCCcceeeecceeecCCCCCCcc---chHHHHHHHHh---hCCcEEEEec-------CCChHHHHHHHHH Confidence 1223333332222 1222234578999887432 23444444444 3333333332 1234688999999 Q ss_pred HhhccCeEEEeccccceEEecCCCCcHHHHHHHhhhcccccccccccCcceEEEEechhcccccccccceeech---HHH Q lcl|Aclame:pro 397 GDSRQDCLVLCSPPRAAVVGIPVNRAVDNLVDWRTASGTYTDNNFNISSTYAAIDGNYKYQYDKYNDVNRWVPL---AAD 473 (660) Q Consensus 397 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~p~~~~~d~~~~~~~~~p~---s~~ 473 (660) |+++++. ..++.++++.+.+.+++++..++.. +++.|.++++||..+.+. .+..+.+|+ +++ T Consensus 334 vkr~r~~----g~~~~aVvg~~~~~~~~~~~~~a~~----------~n~e~vv~v~~~~~~~~~-~g~~~~~~~~~~aa~ 398 (569) T protein:vir:80 334 VKDRTDN----GDPMRIIVGGGTNETVEESITRATN----------LRDPRASLVGFSGTRKMD-DGRLLKLPGYMMASQ 398 (569) T ss_pred HHHHHhC----CCcEEEEecCCCCCCHHHHHHHHhh----------cCCCeEEEEecCceeecC-CCcceeechhhHHHH Confidence 9988762 2234455666778889998887654 788999999999887664 344455555 567 Q ss_pred HHHHHHHhhccCCceecccceeeceeeecccccccCChhhhhhhccccceEEEEecCCeEEEecc-e---ec-CCCCccc Q lcl|Aclame:pro 474 IAGLCARTDNISQPWMSPAGYNRGQILNVIKLAIETRQAQRDRLYQEAINPVTGTGGDGYVLYGD-K---TA-TSVPSPF 548 (660) Q Consensus 474 ~AG~~a~~d~~~g~~~span~~~~~v~~~~~~~~~~~~~e~~~Ln~~gin~i~~~~g~G~~~wG~-r---T~-~~~~~~~ 548 (660) +||++|..+ +++||.|+.+. . .+....+++.|++.|+++|++++++.+++..++|.. + |. ..++..| T Consensus 399 vAG~~A~~~----~~~S~T~k~i~-~---~~i~~~lt~~e~~~li~~G~~~l~~~~~~~~~v~~~vn~itT~t~~~~~~~ 470 (569) T protein:vir:80 399 IAGIASGLE----VGEAITFKHFN-V---TSVDRVFESSQLDMLNESGVISIEFVRNRTLTAFRVVQDVTTYNDKSDPVK 470 (569) T ss_pred HHHHHhcCc----cccCccceeec-c---ccccccCCHHHHHHHHhCCeEEEEEecCceEEEEEEeccceecCCCCCchh Confidence 777777665 88899999874 2 355678999999999999999999998887777743 2 22 2345679 Q ss_pred ceehhhHHHHHHHHHHHHHH-HHHhhcCCCHHHHHHHHHHHHHHHHHHHhcCCeeeEEEEEecCCCCHHHhhCCEEEEEE Q lcl|Aclame:pro 549 DRINVRRLFNMVKTNIGSAS-KYRLFELNNAFTRSSFRTETSQYLQGIKALGGVYNFKVVCDTTNNTPAVIDRNEFVATF 627 (660) Q Consensus 549 ~~i~vrR~~~~i~~~~~~~~-~~~v~epn~~~~~~~i~~~i~~~l~~l~~~gal~g~~v~~d~~~nt~~~i~~G~~~~~i 627 (660) ++|+++|++|+|+++|++.+ +||+++||+...|..|+..++.||.+||++|+|.+|... +-+.++..++++|++ T Consensus 471 ~~i~viRv~D~i~~dir~~~~~~yiGk~nn~~~r~~v~~~i~~~L~~l~~~gaI~~~~~~-----dv~v~~~~d~~~v~~ 545 (569) T protein:vir:80 471 NEMSVGEANDFLVSELKIELDNNFIGTKVIDTSASLIKNFIQSFLDNKKRAREIQDYTPE-----EVQVVLEGDVASISM 545 (569) T ss_pred hhhhhhHHHHHHHHHHHHHHHhhcCcccCChhHHHHHHHHHHHHHHHHHhCCcccCCCcc-----ceEEEecCCEEEEEE Confidence 99999999999999998876 689999999999999999999999999999999998531 223346678999999 Q ss_pred EEEecCcceEEEEEEEEeecCccH Q lcl|Aclame:pro 628 YLQPARSINYITLNFVATATGADF 651 (660) Q Consensus 628 ~~~p~~p~e~i~~~~~~~~~~~~~ 651 (660) .++|+.|||||+++++...+-.+- T Consensus 546 ~v~Pv~~~ekI~~ti~~~~~~~~~ 569 (569) T protein:vir:80 546 TVMPIRSLNKITVQLVYKQQILTA 569 (569) T ss_pred EEEEcccccEEEEEEEEeeeeecC Confidence 999999999999999988765444 No 39 >protein:vir:95741 Length: 587 # NCBI annotation: ORF011 # Family: family:all:2449 # MgeID: mge:1577 # MgeName: G1 # Cross-refs: genbank:acc:YP_240910;genbank:gi:66394960;genbank:GeneID:5132682 Probab=100.00 E-value=5.8e-63 Score=361.79 Aligned_cols=556 Identities=14% Similarity=0.095 Sum_probs=317.0 Q ss_pred CccccCceEEEEe-cCCcccccCCcCceeEEeecccCCCCccEEecCHHHHHHHcCCcCCcchhHHHHHHHHHhcCCEEE Q lcl|Aclame:pro 1 MALLSPGVELKET-TVQSTVVNNSTGTAALAGKFQWGPAFQIKQITDEVALVDMFGTPNTDTADYFMSAMNFLQYGNDLR 79 (660) Q Consensus 1 ~~~~~PGVyveE~-~~~~~i~gv~Ts~~afvG~~~~Gpv~~p~~i~s~~e~~~~fG~~~~~~~~~~~v~~~f~ngG~~~~ 79 (660) =.+.+|||||||. ++.++++|++|++++|||.++|||+++|++++||.||+++||+..--..+-+|...||.|||++|| T Consensus 9 ~~~~~pgv~~~~~~~~~~~~~~~~~~~~~~~g~a~~G~~~~~~~~~~~~~~~~~~~~g~l~~~~~~a~~~~~~~g~~~~~ 88 (587) T protein:vir:95 9 RPITRPHASIEVDTSGIGGSAGSSEKVFCLIGQAEGGEPNTVYELRNYSQAKRLFRSGELLDAIELAWGSNPNYTAGRIL 88 (587) T ss_pred cccccCceEEEEecCCccccCCCCCceEEEEEEeCCCCCceeEEeccHHHHHHHhcCcchHHHHHHHhccccCCCceEEE Confidence 4567999999999 589999999999999999999999999999999999999999855222333333444579999999 Q ss_pred EEEccCccccccccccccccccccccccccccccceeEEeccccccccccceeeeecCCceeeEEeeccccccccccccc Q lcl|Aclame:pro 80 VVRAVDRDTAKNSSPVAGNINFTISSAGTNYRVGDKVVVKYSTDIIEPDGEVTSVDSDGKILNIFIPSGKIIAKAKEIGE 159 (660) Q Consensus 80 vvRv~~~~~~~~a~~~~~~l~~t~~~~g~~~~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~a~~~~~ 159 (660) ++||.+.+ +++...+.+.+++..+| .||+.+++....+.......+......+...+++...+....-. ..+ T Consensus 89 ~~rv~~~~---~a~~~~~~l~~~a~~~G---~~gN~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~si~-y~g- 160 (587) T protein:vir:95 89 AMRIEDAK---PASAEIGGLKITSKIYG---NVANNIQVGLEKNTLSDSLRLRVIFQDDRFNEVYDNIGNIFTIK-YKG- 160 (587) T ss_pred EEEcCCCc---eeEEEecCeEEEEeccc---ccccceEEEEecCCCCCceeEEEEEecccceeeeeeccceeeee-eec- Confidence 99995544 33444566889999998 48998888776554332222222223333334333222110000 000 Q ss_pred ccccccceeeeeeccccccce-eeeecccccccccccccccccccccccceeeeccc-----------cccccccccccc Q lcl|Aclame:pro 160 YPELGSNWTAEMSGSSSGLSA-VITIDSVVMDSGILLTEVETSEEAITSLTFQESIK-----------KYGVPGVVALYP 227 (660) Q Consensus 160 ~~~~~~~~~~~~~~~~~~~s~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~a~~~ 227 (660) ..... +............ ...+.+ +. ..-..|..... ....+...|.++ T Consensus 161 -~~~~~--~~~v~~~~~t~~a~~~~l~~---g~-------------~~v~~yrL~~g~~~~~~~~~~~in~~~~~tAky~ 221 (587) T protein:vir:95 161 -EEANA--TFSVEHDEETQKASRLVLKV---GD-------------QEVKSYDLTGGAYDYTNAIITDINQLPDFEAKLS 221 (587) T ss_pred -ccccc--ceeeeecccceeeeeeeeec---CC-------------ceEEEEEecCCchHHHHHHHHhhccccceEEEEe Confidence 00000 0000000000000 000000 00 00000000000 001111122222 Q ss_pred cccccccccccccc-ccccccceeeeeeccccccccccceeeeeccccCcccceeecccCCcccceeEEeeccccccccc Q lcl|Aclame:pro 228 GELGDQLEIEIVSK-ADYDKGASAQLKIYPDGGTRYSTAKAIFGYGPQTDDQYAIIVRRNDSVVQSVVLSTKRGERDIYG 306 (660) Q Consensus 228 g~~g~~i~v~i~s~-~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~e~~~v~~~~~~~~~~~ 306 (660) +.-++.+.+..... .+.... . ..........+... ......+.......+...+....... T Consensus 222 g~~~~~i~~~~~~~~~~~~v~--~------~~~~v~a~~~d~~~--~~~~~~~v~~~~~~g~~~~~~~~~~~-------- 283 (587) T protein:vir:95 222 PFGDKNLESSKLDKIENANIK--D------KAVYVKAVFGDLEK--QTAYNGIVSFEQLNAEGEVPSNVEVE-------- 283 (587) T ss_pred cccCceeEEeecCccccccee--h------hhhhhhhhhcceee--eeeceeeeeeecccccceeccchhhh-------- Confidence 22223222111000 000000 0 00000000000000 00000000000000000000000000 Q ss_pred cccchhhhhhcCCceEEEEEecCCCcccceeeeeeccccccccccchhhhhhhhhhhhhhhcCcceeecccccCCchhhH Q lcl|Aclame:pro 307 SNIFIDDFFAKGASNYIFATAQGWPKGFSGVIKLNGGLSSNETVEAGDLMEAWDLFADRESVNAQLFIAGSCAGESLEVA 386 (660) Q Consensus 307 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (660) ........................|.||.|+..+ .++..+++.|+. .+...+++. ... T Consensus 284 ---------~~~~~a~~~~~~~~~~~a~~~~t~LtGG~dG~~~---~~y~~~l~ale~---~~~~~i~~~-------t~d 341 (587) T protein:vir:95 284 ---------AGEESATVTATSPIKTIEPFELTKLKGGTNGEPP---ATWADKLDKFAH---EGGYYIVPL-------SSK 341 (587) T ss_pred ---------hcccchheeccccccceeccceeeeecCCCCCCc---ccHHHHHHHHHh---CCcEEEEec-------CCC Confidence 0000000000000000111122358899887543 234444444433 333333322 123 Q ss_pred HHHHHHHHHHHhhccCeEEEeccccceEEecCCCCcHHHHHHHhhhcccccccccccCcceEEEEechhcccccccccce Q lcl|Aclame:pro 387 STVQKHVVAIGDSRQDCLVLCSPPRAAVVGIPVNRAVDNLVDWRTASGTYTDNNFNISSTYAAIDGNYKYQYDKYNDVNR 466 (660) Q Consensus 387 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~p~~~~~d~~~~~~~ 466 (660) .+++.++.+||+++++. ..++.+++..+.+.+++++...... +++.+.++++|+..+. ..++... T Consensus 342 ~~v~a~l~a~vk~~~~~----g~~~~aVvg~~~~~~~~~~~~~a~~----------~n~ervi~v~~~~~~~-~~dg~~~ 406 (587) T protein:vir:95 342 QSVHAEVASFVKERSDA----GEPMRAIVGGGFNESKEQLFGRQES----------LSNPRVSLVANSGTFV-MDDGRKN 406 (587) T ss_pred HHHHHHHHHHHHHHHhC----CCcEEEEEcCCCCCCHHHHHHHHhh----------cCCCcEEEecccceEe-cCCCcee Confidence 46788889999888752 2234455566677888888877654 6788999998876543 2235556 Q ss_pred eech---HHHHHHHHHHhhccCCceecccceeeceeeecccccccCChhhhhhhccccceEEEEecCCeE---E-Eecce Q lcl|Aclame:pro 467 WVPL---AADIAGLCARTDNISQPWMSPAGYNRGQILNVIKLAIETRQAQRDRLYQEAINPVTGTGGDGY---V-LYGDK 539 (660) Q Consensus 467 ~~p~---s~~~AG~~a~~d~~~g~~~span~~~~~v~~~~~~~~~~~~~e~~~Ln~~gin~i~~~~g~G~---~-~wG~r 539 (660) .+|| ++++||++|..| +++||.|+++. ..+....+++.|++.|+++|+++++..++++. + +.+-. T Consensus 407 ~~~~~~~aa~vAGl~Ag~~----~~~SlT~~~i~----~~~v~~~~t~~e~e~ai~~Gvl~l~~~~~~~~~~vriv~~it 478 (587) T protein:vir:95 407 HVPAYMVAVALGGLASGLE----IGESITFKPLR----VSSLDQIYESIDLDELNENGIISIEFVRNRTNTFFRIVDDVT 478 (587) T ss_pred eechHHHHHHHHHHHhcCc----hhcCccceeee----cccccccCCHHHHHHHHhCCeEEEEEecCCcceEEEEeecce Confidence 6776 688999999887 67799999874 23556789999999999999999998777653 3 24445 Q ss_pred ecC-CCCcccceehhhHHHHHHHHHHHHHH-HHHhhcCCCHHHHHHHHHHHHHHHHHHHhcCCeeeEEEEEecCCCCHHH Q lcl|Aclame:pro 540 TAT-SVPSPFDRINVRRLFNMVKTNIGSAS-KYRLFELNNAFTRSSFRTETSQYLQGIKALGGVYNFKVVCDTTNNTPAV 617 (660) Q Consensus 540 T~~-~~~~~~~~i~vrR~~~~i~~~~~~~~-~~~v~epn~~~~~~~i~~~i~~~l~~l~~~gal~g~~v~~d~~~nt~~~ 617 (660) |.. .++..|++|+++|++|+|++.|++.+ +||+++||+...|..|+..+..||.+||+.|+|.+|... +.+-+ T Consensus 479 T~t~~~d~~~~~i~viRv~D~i~~dir~~~~~~~iGk~nn~~~r~~v~~~i~~~L~~l~~~gaI~~~~~~-----dv~v~ 553 (587) T protein:vir:95 479 TFNDKSDPVKAEMAVGEANDFLVSELKVQLEDQFIGTRTINTSASIIKDFIQSYLGRKKRDNEIQDFPAE-----DVQVI 553 (587) T ss_pred eccCCCCcchhhhhhhhhHHHHHHHHHHHHHhhCCccccchHHHHHHHHHHHHHHHHHHhCCcccCCCcc-----ceEEE Confidence 542 44567999999999999999999886 699999999999999999999999999999999998542 22223 Q ss_pred hhCCEEEEEEEEEecCcceEEEEEEEEeecCccH Q lcl|Aclame:pro 618 IDRNEFVATFYLQPARSINYITLNFVATATGADF 651 (660) Q Consensus 618 i~~G~~~~~i~~~p~~p~e~i~~~~~~~~~~~~~ 651 (660) +...++++++.+.|+.|+|+|.++++.+..-++- T Consensus 554 ~~~d~~~v~~~v~Pv~~mekI~vt~~~~~~~~~~ 587 (587) T protein:vir:95 554 VEGNEARISMTVYPIRSFKKISVSLVYKQQTLQA 587 (587) T ss_pred ecCCEEEEEEEEEEcccceEEEEEEEEeeeeecC Confidence 4556899999999999999999999987654433 No 40 >protein:vir:99306 Length: 587 # NCBI annotation: putative major tail sheath protein # Family: family:all:2449 # MgeID: mge:1655 # MgeName: K # Cross-refs: genbank:acc:YP_024479;genbank:gi:48696438;genbank:GeneID:2948034 Probab=100.00 E-value=1.7e-60 Score=348.23 Aligned_cols=552 Identities=14% Similarity=0.104 Sum_probs=318.0 Q ss_pred CccccCceEEEEe-cCCcccccCCcCceeEEeecccCCCCccEEecCHHHHHHHcCCcCCcchhHHHHHHHH----HhcC Q lcl|Aclame:pro 1 MALLSPGVELKET-TVQSTVVNNSTGTAALAGKFQWGPAFQIKQITDEVALVDMFGTPNTDTADYFMSAMNF----LQYG 75 (660) Q Consensus 1 ~~~~~PGVyveE~-~~~~~i~gv~Ts~~afvG~~~~Gpv~~p~~i~s~~e~~~~fG~~~~~~~~~~~v~~~f----~ngG 75 (660) =.+.+|||||||. |+.+++++++|++++|||.++|||+++|++++||.||+++||+- ++..+++++| .||| T Consensus 9 ~~~~~pgv~~~~~~~~~~~~~~~~~~~~~~~g~a~~G~~~~~~~~~~~~~~~~~~~~g----~l~~~~~~a~~~~~~~g~ 84 (587) T protein:vir:99 9 RPITRPHASIEVDTSGIGGSAGSSEKVFCLIGQAEGGEPNTVYELRNYSQAKRLFRSG----ELLDAIELAWGSNPNYTA 84 (587) T ss_pred cccccCceEEEEecCCccccCCCCCceEEEEEEecCCccceeEEeccHHHHHHHhcCc----chHHHHHHHhccccCCCc Confidence 4567999999999 58999999999999999999999999999999999999999873 3667777666 6999 Q ss_pred CEEEEEEccCccccccccccccccccccccccccccccceeEEeccccccccccceeeeecCCceeeEEeeccccccccc Q lcl|Aclame:pro 76 NDLRVVRAVDRDTAKNSSPVAGNINFTISSAGTNYRVGDKVVVKYSTDIIEPDGEVTSVDSDGKILNIFIPSGKIIAKAK 155 (660) Q Consensus 76 ~~~~vvRv~~~~~~~~a~~~~~~l~~t~~~~g~~~~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~a~ 155 (660) ++||++||.+.+ +++...+.+.+++..+| .||+.+++...................+...+++...+....-. T Consensus 85 ~~~~~~rv~~~~---~a~~~~~~l~~~a~~~G---~~gN~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~~i~- 157 (587) T protein:vir:99 85 GRILAMRIEDAK---PASAEIGGLKITSKIYG---NVANNIQVGLEKNTLSDSLRLRVIFQDDRFNEVYDNIGNIFTIK- 157 (587) T ss_pred eEEEEEEcCCCc---eeEEEecCeEEEEeecc---ccccceEEEEccCCCCcceeEEEEEecccceeeeeeccceeeEE- Confidence 999999995544 34445567899999998 58999988877665433222222223333333333222100000 Q ss_pred ccccccccccceeeeeeccccccce-eeeecccccccccccccccccccccccceeeecccc-----------ccccccc Q lcl|Aclame:pro 156 EIGEYPELGSNWTAEMSGSSSGLSA-VITIDSVVMDSGILLTEVETSEEAITSLTFQESIKK-----------YGVPGVV 223 (660) Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~s~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~ 223 (660) . ....... +............ ...+.+ + ...-..+...... ...+... T Consensus 158 y--~g~~~~a--~~~v~~~~~t~~a~~~~l~~---g-------------~~~v~~yrL~~g~~~~~~~~~~~i~~~~~~t 217 (587) T protein:vir:99 158 Y--KGEEANA--TFSVEHDEETQKASRLVLKV---G-------------DQEVKSYDLTGGAYDYTNAIITDINQLPDFE 217 (587) T ss_pred e--ecccccc--eeeEeecCcceeeeeeeeec---C-------------CceeEEEEecCCchHHHHHHHhhhcccccee Confidence 0 0000000 0000000000000 000000 0 0000000000000 0011112 Q ss_pred ccccccccccccccccc-cccccccceeeeeeccccccccccceeeeeccccCcccceeecccCCcccceeEEeeccccc Q lcl|Aclame:pro 224 ALYPGELGDQLEIEIVS-KADYDKGASAQLKIYPDGGTRYSTAKAIFGYGPQTDDQYAIIVRRNDSVVQSVVLSTKRGER 302 (660) Q Consensus 224 a~~~g~~g~~i~v~i~s-~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~e~~~v~~~~~~~ 302 (660) |.+++.-++.+...... ....... . + ..+... ...+ ........... .+....+.. T Consensus 218 Aky~~~~~~~i~~~~~~~~~~~~v~--~----------~----~~~v~a-~~~D----~~~~~~~~~~~--~~~~~~g~~ 274 (587) T protein:vir:99 218 AKLSPFGDKNLESSKLDKIENANIK--D----------K----AVYVKA-VFGD----LEKQTAYNGIV--SFEQLNAEG 274 (587) T ss_pred EEeeccCCceeEeecccccccceee--e----------e----eeeeeh-hccc----eeeecccceee--eeeeccccc Confidence 22222222222111000 0000000 0 0 000000 0000 00000000000 000000000 Q ss_pred cccccccchhhhhhcCCceEEEEEecCCCcccceeeeeeccccccccccchhhhhhhhhhhhhhhcCcceeecccccCCc Q lcl|Aclame:pro 303 DIYGSNIFIDDFFAKGASNYIFATAQGWPKGFSGVIKLNGGLSSNETVEAGDLMEAWDLFADRESVNAQLFIAGSCAGES 382 (660) Q Consensus 303 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (660) . ... .............................|.||.|+... .++..+++.|+. .+...+++. T Consensus 275 ~-~~~---~~~~~~~~~~~~~~~~~~~~~~a~~~~t~LtGG~dG~~~---~sy~~al~ale~---~~~~~i~~~------ 338 (587) T protein:vir:99 275 E-VPS---NVEVEAGEESATVTATSPIKTIEPFELTKLKGGTNGEPP---ATWADKLDKFAH---EGGYYIVPL------ 338 (587) T ss_pred c-hhh---hhhhhhccccceeeeeccccceecccceeeecCCCCCcc---ccHHHHHHHHhh---CCcEEEEec------ Confidence 0 000 000000000000111111111111122458899887543 234444454443 333333322 Q ss_pred hhhHHHHHHHHHHHHhhccCeEEEeccccceEEecCCCCcHHHHHHHhhhcccccccccccCcceEEEEechhccccccc Q lcl|Aclame:pro 383 LEVASTVQKHVVAIGDSRQDCLVLCSPPRAAVVGIPVNRAVDNLVDWRTASGTYTDNNFNISSTYAAIDGNYKYQYDKYN 462 (660) Q Consensus 383 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~p~~~~~d~~~ 462 (660) ....+++.++.+||+++++. ..++.+++..+.+.+++++...... +++.+.+.++|+..+. ..+ T Consensus 339 -t~d~~i~a~l~a~vk~~r~~----g~~~~aVlg~~~~~~~~~~~~~a~~----------~n~e~vi~v~~~~~~~-~~d 402 (587) T protein:vir:99 339 -SSKQSVHAEVASFVKERSDA----GEPMRAIVGGGFNESKEQLFGRQAS----------LSNPRVSLVANSGTFV-MDD 402 (587) T ss_pred -CCCHHHHHHHHHHHHHHHhC----CCcEEEEecCCCCCCHHHHHHHhhh----------cCCCcEEEEeccceEe-cCC Confidence 12346788899999888752 2234455666677888888887654 6788999998875533 223 Q ss_pred ccceeech---HHHHHHHHHHhhccCCceecccceeeceeeecccccccCChhhhhhhccccceEEEEecCCe---EE-E Q lcl|Aclame:pro 463 DVNRWVPL---AADIAGLCARTDNISQPWMSPAGYNRGQILNVIKLAIETRQAQRDRLYQEAINPVTGTGGDG---YV-L 535 (660) Q Consensus 463 ~~~~~~p~---s~~~AG~~a~~d~~~g~~~span~~~~~v~~~~~~~~~~~~~e~~~Ln~~gin~i~~~~g~G---~~-~ 535 (660) +....+|| ++++||++|..+ +++||.|+.+. ..+....+++.|++.|+++|+++++..++++ ++ + T Consensus 403 g~~~~~~~~~~aa~vAGl~Ag~~----~~~SlT~~~i~----~~~v~~~~t~~e~e~li~~Gvl~l~~~~~~~~~~vriv 474 (587) T protein:vir:99 403 GRKNHVPAYMVAVALGGLASGLE----IGESITFKPLR----VSSLDQIYESIDLDELNENGIISIEFVRNRTNTFFRIV 474 (587) T ss_pred CceeeechHHHHHHHHHHHhcCc----hhcCccceeee----cccccccCCHHHHHHHHhCCeEEEEEecCCcceEEEEe Confidence 45566776 688899999886 67799999874 2355678999999999999999999887664 33 2 Q ss_pred ecceecC-CCCcccceehhhHHHHHHHHHHHHHH-HHHhhcCCCHHHHHHHHHHHHHHHHHHHhcCCeeeEEEEEecCCC Q lcl|Aclame:pro 536 YGDKTAT-SVPSPFDRINVRRLFNMVKTNIGSAS-KYRLFELNNAFTRSSFRTETSQYLQGIKALGGVYNFKVVCDTTNN 613 (660) Q Consensus 536 wG~rT~~-~~~~~~~~i~vrR~~~~i~~~~~~~~-~~~v~epn~~~~~~~i~~~i~~~l~~l~~~gal~g~~v~~d~~~n 613 (660) .+-.|.. .++..|++|+++|++|+|++.|++.+ ++|+++||+...|..|+..|..||.+||+.|+|.+|... . T Consensus 475 ~~ItT~t~~~~~~~~~i~viRv~D~i~~di~~~~~~~yiGk~Nn~~~r~~i~~~i~~~L~~l~~~gaI~~~~~~-----d 549 (587) T protein:vir:99 475 DDVTTFNDKSDPVKAEMAVGEANDFLVSELKVQLEDQFIGTRTINTSASIIKDFIQSYLGRKKRDNEIQDFPAE-----D 549 (587) T ss_pred eceeeccCCCCchhhhhhhhhhHHHHHHHHHHHHHhhCCccccchHHHHHHHHHHHHHHHHHHhCCcccCCCcc-----c Confidence 4445542 44567999999999999999999886 689999999999999999999999999999999998642 1 Q ss_pred CHHHhhCCEEEEEEEEEecCcceEEEEEEEEeecCccH Q lcl|Aclame:pro 614 TPAVIDRNEFVATFYLQPARSINYITLNFVATATGADF 651 (660) Q Consensus 614 t~~~i~~G~~~~~i~~~p~~p~e~i~~~~~~~~~~~~~ 651 (660) .+-+....++++++.++|+.|+|+|.+++....+-..- T Consensus 550 v~v~~~~d~~~v~~~v~Pv~~mekIy~tv~~~~~~~~~ 587 (587) T protein:vir:99 550 VQVIVEGNEARISMTVYPIRSFKKISVSLVYKQQTLQA 587 (587) T ss_pred eEEEecCCEEEEEEEEEEcccceEEEEEEEEEeeeecC Confidence 11123445799999999999999999999988664443 No 41 >protein:vir:96586 Length: 587 # NCBI annotation: ORF011 # Family: family:all:2449 # MgeID: mge:1623 # MgeName: Twort # Cross-refs: genbank:acc:YP_238553;genbank:gi:66391266;genbank:GeneID:5130368 Probab=100.00 E-value=1.9e-58 Score=337.08 Aligned_cols=563 Identities=14% Similarity=0.087 Sum_probs=315.9 Q ss_pred CccccCceEEEEe-cCCcccccCCcCceeEEeecccCCCCccEEecCHHHHHHHcCCcCCcchhHHHHHHHH----HhcC Q lcl|Aclame:pro 1 MALLSPGVELKET-TVQSTVVNNSTGTAALAGKFQWGPAFQIKQITDEVALVDMFGTPNTDTADYFMSAMNF----LQYG 75 (660) Q Consensus 1 ~~~~~PGVyveE~-~~~~~i~gv~Ts~~afvG~~~~Gpv~~p~~i~s~~e~~~~fG~~~~~~~~~~~v~~~f----~ngG 75 (660) =.|.+|||||++. ++..+++++++++.+|||.+++||+++|++|++|.||.+.||+.. |..|++++| .||| T Consensus 9 ~~~~~Pgv~~~~~~~~~~~~~~~~~~~~~~iG~a~~g~~~~~~~~~~~~~~~~~~g~G~----l~~ai~~a~~~~~~~g~ 84 (587) T protein:vir:96 9 RPIQRPHASIEVDSSGIGGSASNSEKILCLIGKAEGGEPNTVYQVRNYAQAKSVFRSGE----LLDAIELAWGSNPQYTA 84 (587) T ss_pred CcccCCceEEEEecCCccCCCCCCCceEEEEEEecCCCCceeEEEcChHHHHHhhcCCc----HHHHHHHHhccCcCCCc Confidence 4678999999999 578999999999999999999999999999999999999999753 777777777 6999 Q ss_pred CEEEEEEccCccccccccccccccccccccccccccccceeEEeccccccccccceeeeecCCceeeEEeeccccccccc Q lcl|Aclame:pro 76 NDLRVVRAVDRDTAKNSSPVAGNINFTISSAGTNYRVGDKVVVKYSTDIIEPDGEVTSVDSDGKILNIFIPSGKIIAKAK 155 (660) Q Consensus 76 ~~~~vvRv~~~~~~~~a~~~~~~l~~t~~~~g~~~~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~a~ 155 (660) +.||+||+.+ +.+++...+.+.++....| .|++.+++...................+....++..-+.. . T Consensus 85 ~~~~a~rv~~---~~~a~~~~~~~~~~~~~~g---~~~n~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~n~G~v----~ 154 (587) T protein:vir:96 85 GKILAMRVED---AKASQLEKGGLRVTSKIFG---SVSNDIQVALEKNTITDSLRLRVVFQKDNYQEVFDNLGNI----F 154 (587) T ss_pred eEEEEEecCC---CccceeecccccccccccC---CCCceEEEEEEeccCCCccceEEEEecCCceeeccccCce----E Confidence 9999999954 3334455566777766666 4788887776443322111111111112222221111100 0 Q ss_pred ccccccccccceeeeeecccccccee-eeecccccccccccccccccccccccceeeecccccccccccccccccccccc Q lcl|Aclame:pro 156 EIGEYPELGSNWTAEMSGSSSGLSAV-ITIDSVVMDSGILLTEVETSEEAITSLTFQESIKKYGVPGVVALYPGELGDQL 234 (660) Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~s~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~g~~g~~i 234 (660) .+ .+...................+. ..+.+.. .......... ......... .......+...+.+++..++.+ T Consensus 155 ~i-~y~g~~~~a~~~~~~~~~~~~A~~l~l~gg~-~~v~~yrl~~--g~~~~~~~~--~~~~~~~~~~tAky~g~~~n~~ 228 (587) T protein:vir:96 155 SI-NYKGEGEKATFSVEKDKETQEAKRLVLKVDE-KEVKAYELNG--GAYSFTNEI--ITDINELPDFEAKLSPFGDKNL 228 (587) T ss_pred EE-EecccccceeEeeccCcccceeeeeEEEecC-ceEEEEEeCC--Cchhhhhhh--hhhhccccceEEEeecccCcee Confidence 00 00000000000000000000000 0000000 0000000000 000000000 0000011122334444444443 Q ss_pred cccccc-cccccccceeeeeeccccccccccceeeeeccccCcccceeecccCCcccceeEEeeccccccccccccchhh Q lcl|Aclame:pro 235 EIEIVS-KADYDKGASAQLKIYPDGGTRYSTAKAIFGYGPQTDDQYAIIVRRNDSVVQSVVLSTKRGERDIYGSNIFIDD 313 (660) Q Consensus 235 ~v~i~s-~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~e~~~v~~~~~~~~~~~~~~~~~~ 313 (660) .+.... ..+.+.. ....................+.. .+......... ... .. T Consensus 229 ~v~v~d~~~~~~~k-------------------~~~~y~~t~~~di~~~~~~~~~~----~~~~~~~~~~~---~~~-~~ 281 (587) T protein:vir:96 229 ESRKLDEATDVDIK-------------------GKAVYVKAVFGDIENQTQYNQYV----KFEQLPEQASE---PSD-VE 281 (587) T ss_pred EEEeeccccccccc-------------------eEEEeehhhhhhhhhhhccccce----eeccccchhhh---hhc-cc Confidence 332110 0000000 00000000000000000000000 00000000000 000 00 Q ss_pred hhhcCCceEEEEEecCCCcccceeeeeeccccccccccchhhhhhhhhhhhhhhcCcceeecccccCCchhhHHHHHHHH Q lcl|Aclame:pro 314 FFAKGASNYIFATAQGWPKGFSGVIKLNGGLSSNETVEAGDLMEAWDLFADRESVNAQLFIAGSCAGESLEVASTVQKHV 393 (660) Q Consensus 314 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 393 (660) ..........................|.||.++..+. ++..+++.+ +..+...+.+. ....+++..+ T Consensus 282 v~~~~~~~~~~~~~~~~~~~~~~~~aLtGG~dG~~~~---~y~~~l~al---e~~~~~~i~~~-------t~d~ai~~~l 348 (587) T protein:vir:96 282 VHAETESATVTATSKPKAIEPFELTKLSGGTNGEPPT---SWSAKLEKF---KNEGGYYIVPL-------TDRQSVHSEV 348 (587) T ss_pred ccccccceeeeecccccccccccceeeecCCCCCCcc---cHHHHHHHH---hhCCcEEEEec-------CCCHHHHHHH Confidence 0000111111111111111122234588998875432 344444444 33333343332 1234688889 Q ss_pred HHHHhhccCeEEEeccccceEEecCCCCcHHHHHHHhhhcccccccccccCcceEEEEechhcccccccccceeech--- Q lcl|Aclame:pro 394 VAIGDSRQDCLVLCSPPRAAVVGIPVNRAVDNLVDWRTASGTYTDNNFNISSTYAAIDGNYKYQYDKYNDVNRWVPL--- 470 (660) Q Consensus 394 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~p~~~~~d~~~~~~~~~p~--- 470 (660) .+||+++++- ..++.+++..+.+.+++++.+.+.. +++.+.++++++..+.+.. +.....|+ T Consensus 349 ~a~vk~~r~~----gk~~~aVlg~~~~~~~~~~~~~a~~----------~n~e~vi~v~~~~~~~~~~-~~~~~~~~~~~ 413 (587) T protein:vir:96 349 ATFVKNRSDA----GEPMRAIVGGGTSETKEKLFGRQAI----------LNNPRVALVANSGKFVMGN-GRILQAPAYMV 413 (587) T ss_pred HHHHHHHHhC----CCeEEEEecCCCCCCHHHHHHHHhh----------cCCCcEEEEecceEEecCC-CceeeechhhH Confidence 9999888751 2234455566667888888877654 7788999999987766543 33334443 Q ss_pred HHHHHHHHHHhhccCCceecccceeeceeeecccccccCChhhhhhhccccceEEEEecCCeEEEecc-eec----CCCC Q lcl|Aclame:pro 471 AADIAGLCARTDNISQPWMSPAGYNRGQILNVIKLAIETRQAQRDRLYQEAINPVTGTGGDGYVLYGD-KTA----TSVP 545 (660) Q Consensus 471 s~~~AG~~a~~d~~~g~~~span~~~~~v~~~~~~~~~~~~~e~~~Ln~~gin~i~~~~g~G~~~wG~-rT~----~~~~ 545 (660) ++++||++|..+ +++||.|+.+.+ .+....+++.|++.|.++|+.++++.++++.++|.. +++ ..++ T Consensus 414 aa~vAG~~Ag~~----~~~S~T~~~~~~----~~v~~~~t~~e~~~~i~~G~~~l~~~~~~~~~v~~~vnsitT~t~~~~ 485 (587) T protein:vir:96 414 ASAVAGLVSGLD----IGESITFKPLFV----NSLDKVYESEELDELNENGIITIEFVRNRMTTMFRIVDDVTTFPDKND 485 (587) T ss_pred HHHHHHHHhcCc----cccCccceeeec----ccccccCCHHHHHHHHhCCeEEEEEecCCcEEEEEeeccceecCCCCC Confidence 678899999886 778999998742 355678999999999999999999988887888743 433 2334 Q ss_pred cccceehhhHHHHHHHHHHHHHH-HHHhhcCCCHHHHHHHHHHHHHHHHHHHhcCCeeeEEEEEecCCCCHHHhhCCEEE Q lcl|Aclame:pro 546 SPFDRINVRRLFNMVKTNIGSAS-KYRLFELNNAFTRSSFRTETSQYLQGIKALGGVYNFKVVCDTTNNTPAVIDRNEFV 624 (660) Q Consensus 546 ~~~~~i~vrR~~~~i~~~~~~~~-~~~v~epn~~~~~~~i~~~i~~~l~~l~~~gal~g~~v~~d~~~nt~~~i~~G~~~ 624 (660) ..|++|+++|++|+|.+.|++.+ ++|+++||+...|..|+..|..||.+|+++|+|.+|... +.+-++...+++ T Consensus 486 ~~~~~i~virv~D~i~~di~~~~~~~yiGk~nn~~~r~~v~~~i~~~L~~l~~~g~I~~~~~~-----dv~v~~~~D~~~ 560 (587) T protein:vir:96 486 PVKSEMALGEANDFLVSELKILLEEQYIGTRTINTSASQIKDFVQSYLGRKKRDNEIQDFPPE-----DVQVIIEGNEAR 560 (587) T ss_pred chhhhhhhHHHHHHHHHHHHHHHHhcCCccccCHHHHHHHHHHHHHHHHHHHhCCcccCCCcc-----ceEEEecCCEEE Confidence 57999999999999999999887 589999999999999999999999999999999998542 112223445799 Q ss_pred EEEEEEecCcceEEEEEEEEeecCccH Q lcl|Aclame:pro 625 ATFYLQPARSINYITLNFVATATGADF 651 (660) Q Consensus 625 ~~i~~~p~~p~e~i~~~~~~~~~~~~~ 651 (660) |++.++|+.|||||.+++.....-++- T Consensus 561 v~~~v~Pv~~mekIy~tv~~~~~~~~~ 587 (587) T protein:vir:96 561 ISLTIFPIRALKKISVSLVYRQQTLQA 587 (587) T ss_pred EEEEEEEcccceEEEEEEEEEeeeecC Confidence 999999999999999999876553333 No 42 >protein:vir:100829 Length: 607 # NCBI annotation: hypothetical protein # Family: family:all:2449 # MgeID: mge:1633 # MgeName: LP65 # Cross-refs: genbank:acc:YP_164738;genbank:gi:56693151;genbank:GeneID:3197462 Probab=100.00 E-value=1.6e-52 Score=304.62 Aligned_cols=567 Identities=15% Similarity=0.130 Sum_probs=307.1 Q ss_pred CccccCceEEEEe-cCCcccccCCcCceeEEeecccCCCCccEEecCHHHHHHHcCCc--CCcchhHHHHHHHHHhcCCE Q lcl|Aclame:pro 1 MALLSPGVELKET-TVQSTVVNNSTGTAALAGKFQWGPAFQIKQITDEVALVDMFGTP--NTDTADYFMSAMNFLQYGND 77 (660) Q Consensus 1 ~~~~~PGVyveE~-~~~~~i~gv~Ts~~afvG~~~~Gpv~~p~~i~s~~e~~~~fG~~--~~~~~~~~~v~~~f~ngG~~ 77 (660) =-+.+||||+++. ++..+++++++++++|||.+++||+++|++++||.|+.+.||+. .+--.+.|.+..||.|||+. T Consensus 18 ~~~~~pgv~~~~~~~~~~~~~~~~~~~~~~iG~a~~G~~~~~~~~~~~~~a~~~f~~g~l~~a~~~a~~~~~~~~~g~~~ 97 (607) T protein:vir:10 18 FYDSRPHVETNFDDSRLSNTASDSAKNIFMLGSATNGDPTKVYEIRTSQQATKIFGSGDLVDGIKLAFDPTGNSVTNGGT 97 (607) T ss_pred CCccCCceEEEEecCcCcCCCCCCcceEEEEEEeCCCCCceEEEEcchhHHHHhhcCcchHHHHHHhhccccCCccCCce Confidence 4466999999999 58999999999999999999999999999999999999999763 33445667777788999999 Q ss_pred EEEEEccCccccccccccccccccccccccccccccceeEEeccccccccccceeeeecCCceeeEEeeccccccccccc Q lcl|Aclame:pro 78 LRVVRAVDRDTAKNSSPVAGNINFTISSAGTNYRVGDKVVVKYSTDIIEPDGEVTSVDSDGKILNIFIPSGKIIAKAKEI 157 (660) Q Consensus 78 ~~vvRv~~~~~~~~a~~~~~~l~~t~~~~g~~~~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~a~~~ 157 (660) ||+||+.+... ++...+.+.++....|. +++.+++...++.............+. ..+++...+... . T Consensus 98 ~~~~rv~~~~~---a~~~~~~~~~~~~~~~~---~~~~i~~~l~~~~~~~~~~~~~~~~d~-~~~~~~n~g~~~----~- 165 (607) T protein:vir:10 98 VYALRVDNAKQ---ASLVKDGLTFTSSIFGT---NANQVSVALDNDVFGVPRITVNYSPDN-YERTYTNIGQMF----S- 165 (607) T ss_pred EEEEeCCCccc---cceeccccccccccccc---CCCceEEEEEecCCCccceeEEeeccc-ceeeeeecccee----e- Confidence 99999955443 33344455566555553 466565555322221111111111111 112221111000 0 Q ss_pred ccccccccceeeeeeccccccceeeeeccccccccccccccccccccc--ccceeeeccccccccccccccccccccccc Q lcl|Aclame:pro 158 GEYPELGSNWTAEMSGSSSGLSAVITIDSVVMDSGILLTEVETSEEAI--TSLTFQESIKKYGVPGVVALYPGELGDQLE 235 (660) Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~a~~~g~~g~~i~ 235 (660) -.+. +...........+. .+....+......+... ....+......+... ..+. T Consensus 166 i~y~-----------g~~~~a~~~v~~~~--~g~~~~lt~~~~~~~~~~~~V~~~~l~~~~~~t~-----------~~l~ 221 (607) T protein:vir:10 166 ITYS-----------GKSASAGYTVSHDT--DGKAILLTLGSGDSIDKLTNVATFDLTMSKYDTI-----------AKLM 221 (607) T ss_pred cccC-----------cccccccceeeecC--CCceeEEEecCCCccceeeeeecccccccccchH-----------HHHH Confidence 0000 00000000000000 00000000000000000 000000000000000 0000 Q ss_pred cccccccccccccee---eeeeccccccccccceeeeeccccCcccceeecccCCcccceeEEeeccccccccccccchh Q lcl|Aclame:pro 236 IEIVSKADYDKGASA---QLKIYPDGGTRYSTAKAIFGYGPQTDDQYAIIVRRNDSVVQSVVLSTKRGERDIYGSNIFID 312 (660) Q Consensus 236 v~i~s~~~~~~~~~~---~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~e~~~v~~~~~~~~~~~~~~~~~ 312 (660) ..+.+..++.+.... .............+-. ........ ................+. ...+... ... T Consensus 222 ~din~~~~~~A~~~g~~~i~tky~d~~~~~i~V~-~~~~iv~a-~~~D~~~~~~~~~~~~~t--~~~~~~~-~~~----- 291 (607) T protein:vir:10 222 QAISATPNFSASVVGSPSVNTSYLDEVTSPVDVK-TAPAVVTA-KIGDAISKLGYDPYVVVT--QTSNNKP-IVN----- 291 (607) T ss_pred HHhhcCCceEEEEecccceeeeccccccceeEEE-Eeeeeech-hhhhhhhcccccceEEee--ecccchh-hhh----- Confidence 000000000000000 0000000000000000 00000000 000000000000000000 0000000 000 Q ss_pred hhhhcCCceEEEEEecCC--C-cccceeeeeeccccccccccchhhhhhhhhhhhhhhcCcceeecccccCCchhhHHHH Q lcl|Aclame:pro 313 DFFAKGASNYIFATAQGW--P-KGFSGVIKLNGGLSSNETVEAGDLMEAWDLFADRESVNAQLFIAGSCAGESLEVASTV 389 (660) Q Consensus 313 ~~~~~g~~~~~~~~~~~~--~-~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 389 (660) ..... ........... . ........|.||.++... .++..+++.|+.. +...+.+.. ...++ T Consensus 292 ~~~~~--~~~~~~~~~~~~~~~~a~~a~~~LtGGtdG~~~---~ty~dal~aLe~~---e~~~i~~~t-------~d~ai 356 (607) T protein:vir:10 292 GVSAG--TGSATASVTTAPESFPANFDTAFLTGGSTGDVP---VSWADKFNGAIGN---NVYYIIPLT-------SEENI 356 (607) T ss_pred hhhcc--ccceeeeeeccccccccccceeeeeCCCCCCch---hhHHHHHHHHhhc---CceEEEecC-------CCHHH Confidence 00000 00000110000 0 111223568899888543 3344445544443 333333321 23468 Q ss_pred HHHHHHHHhhccCeEEEeccccceEEecCCCCcHHHHHHHhhhcccccccccccCcceEEEEechhcccccccccceeec Q lcl|Aclame:pro 390 QKHVVAIGDSRQDCLVLCSPPRAAVVGIPVNRAVDNLVDWRTASGTYTDNNFNISSTYAAIDGNYKYQYDKYNDVNRWVP 469 (660) Q Consensus 390 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~p~~~~~d~~~~~~~~~p 469 (660) +.++.+||+++++. ..++.+++..+.+.+++++.++... +++.+.+++.|+.++.|. +..+..| T Consensus 357 ~~~l~a~vkr~~~~----g~~~~aVlg~~~~~t~~~~~t~a~~----------~N~ervv~V~~~~~~~~~--G~~~~~~ 420 (607) T protein:vir:10 357 HAELQAFIDEQHVL----GYNYHAFVGGGFAEPLEQILSRQVN----------INDSRFGLVGQSGHVQEG--GESVHVP 420 (607) T ss_pred HHHHHHHHHHHHhC----CCcEEEEecCCCCCCHHHHHHHHHh----------hCCCcEEEEecCeeEeeC--Ccceecc Confidence 88899999888752 2234455666677889998887664 678899999998876553 4445555 Q ss_pred h---HHHHHHHHHHhhccCCceecccceeeceeeecccccccCChhhhhhhccccceEEEEecC----CeEEEecceec- Q lcl|Aclame:pro 470 L---AADIAGLCARTDNISQPWMSPAGYNRGQILNVIKLAIETRQAQRDRLYQEAINPVTGTGG----DGYVLYGDKTA- 541 (660) Q Consensus 470 ~---s~~~AG~~a~~d~~~g~~~span~~~~~v~~~~~~~~~~~~~e~~~Ln~~gin~i~~~~g----~G~~~wG~rT~- 541 (660) + ++++||++|..+ +.+||.|+.+.. .+....+++.|++.|.++|+.++...++ ++++++.+-|. T Consensus 421 ~~~~Aa~vAGl~Ag~~----~~~SlT~k~i~~----~~v~~~lt~~e~e~ai~~Gv~~l~~~~~~~~~~~vrIv~~ItT~ 492 (607) T protein:vir:10 421 AYLMAAYVGGLSSSLG----VAVPITNKKLAL----VDLDQNFSGDDLNTLNQNGVIGIEHLVNRNATGGYYIVQDVSTN 492 (607) T ss_pred HHHHHHHHHHHHhcCc----cccCcccceecc----ccccccCCHHHHHHHHhCCeEEEEEccCccccceEEEeeeeeec Confidence 4 688889999886 677999998742 3556789999999999999999976543 36888777665 Q ss_pred -CCCCcccceehhhHHHHHHHHHHHHHH-HHHhhcCCCHHHHHHHHHHHHHHHHHHHh--cCCeeeEEEEEecCCCCHHH Q lcl|Aclame:pro 542 -TSVPSPFDRINVRRLFNMVKTNIGSAS-KYRLFELNNAFTRSSFRTETSQYLQGIKA--LGGVYNFKVVCDTTNNTPAV 617 (660) Q Consensus 542 -~~~~~~~~~i~vrR~~~~i~~~~~~~~-~~~v~epn~~~~~~~i~~~i~~~l~~l~~--~gal~g~~v~~d~~~nt~~~ 617 (660) ..++..|++|+++|++|+|.+.+++.. ++|++++|+...|.+++..+..||..+|+ .|+|.+|..+ +-+-. T Consensus 493 t~~~~~~~~~i~viRv~D~i~~dir~~~~~~yIGk~nnd~~~~~vk~~i~~~L~~~~l~~~gaI~df~~e-----dv~v~ 567 (607) T protein:vir:10 493 TVSSSHVDGSLYLGELTDFLFDNLRFVLRDTYIGSNIRSTSADDIKSTVASYLYSEMNNDDGLIVDFSES-----DIVVT 567 (607) T ss_pred cCCCCcchheeehhhhHHHHHHHHHHHHhhcCCcccCCcchHHHHHHHHHHHHHHHHHHhcCceeCCCcc-----ccEEe Confidence 344567999999999999999999886 58999999999999999999999977665 6899987421 11222 Q ss_pred hhCCEEEEEEEEEecCcceEEEEEEEEeecCccHHHHHHh Q lcl|Aclame:pro 618 IDRNEFVATFYLQPARSINYITLNFVATATGADFDELIGA 657 (660) Q Consensus 618 i~~G~~~~~i~~~p~~p~e~i~~~~~~~~~~~~~~e~~~~ 657 (660) ....++++++.++|+.++|+|.+++....+-.+-++---- T Consensus 568 ~~~D~v~v~~~v~Pv~~iekIyvtv~v~~~~~~~~~~~~~ 607 (607) T protein:vir:10 568 ISGTVVYIQFAVAPTQEIKNIVVSGTYSNYSATSEDNTTK 607 (607) T ss_pred eCCCEEEEEEEEEEcccceEEEEEEEEEEEEEeeccCCCC Confidence 3456899999999999999999999988765544432222 No 43 >protein:vir:102957 Length: 437 # NCBI annotation: sheath tail protein # Family: family:all:632 # MgeID: mge:1461 # MgeName: EJ-1 # Cross-refs: genbank:acc:NP_945292;genbank:gi:39653727;uniprot:Q708M0;genbank:GeneID:2672871 Probab=100.00 E-value=8.7e-50 Score=289.56 Aligned_cols=422 Identities=15% Similarity=0.162 Sum_probs=265.1 Q ss_pred CccccCceEEEEec-CCcccccCCcCceeEEeecccCCCCccEEecCHHHHHHHcCCcCCcchhHHHHHHHHHhcCCEEE Q lcl|Aclame:pro 1 MALLSPGVELKETT-VQSTVVNNSTGTAALAGKFQWGPAFQIKQITDEVALVDMFGTPNTDTADYFMSAMNFLQYGNDLR 79 (660) Q Consensus 1 ~~~~~PGVyveE~~-~~~~i~gv~Ts~~afvG~~~~Gpv~~p~~i~s~~e~~~~fG~~~~~~~~~~~v~~~f~ngG~~~~ 79 (660) .+..-|||||||++ +.++|++++|+++||+|.++|||+++|++|+||.||++.||+... +..+.+..+|++||++|| T Consensus 9 ~~k~~PGvYi~~~~~~~~~i~~~~~~~~a~~~~~~~Gp~~~~~~i~s~~d~~~~fG~~~~--~~~~~~~~~~~~g~~~~~ 86 (437) T protein:vir:10 9 QNKVRPGAYINVKSKDIAMTRLGGDGVVTVPLALSFGQSKKLMKIRRGEDLFKKLGYEQE--SPQLLLLNEAFKRVSEVL 86 (437) T ss_pred cceecCceeEEEecCCcceeeccCCcEEEEEEEecCCCCceeEEEecHHHHHHHcCCccc--hhHHHHHHHHhcCCCEEE Confidence 78889999999995 789999999999999999999999999999999999999997543 344445556669999999 Q ss_pred EEEccCccccccccccccccccccccccccccccceeEEeccccccccccceeeeecCCceeeEEeeccccccccccccc Q lcl|Aclame:pro 80 VVRAVDRDTAKNSSPVAGNINFTISSAGTNYRVGDKVVVKYSTDIIEPDGEVTSVDSDGKILNIFIPSGKIIAKAKEIGE 159 (660) Q Consensus 80 vvRv~~~~~~~~a~~~~~~l~~t~~~~g~~~~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~a~~~~~ 159 (660) ++|+.++.. ++....+.+.+++..+|. ||+.+++.+...... ........ T Consensus 87 ~~R~~~g~~--a~~tl~~~~~~~A~~~G~---~gn~i~v~v~~~~~d-----------~~~~~v~~-------------- 136 (437) T protein:vir:10 87 LYRLNTGEK--ANVSLSDNVTAQAKYSGV---RGNDITVTVKTNVDD-----------PSSFDVVT-------------- 136 (437) T ss_pred EEECCCCce--eeEeeccceEEEeccCCc---ccceeEEEEeeccCC-----------ccceEEEE-------------- Confidence 999976542 333334556677777773 666665544322100 00000000 Q ss_pred ccccccceeeeeeccccccceeeeecccccccccccccccccccccccceeeeccccccccccccccccccccccccccc Q lcl|Aclame:pro 160 YPELGSNWTAEMSGSSSGLSAVITIDSVVMDSGILLTEVETSEEAITSLTFQESIKKYGVPGVVALYPGELGDQLEIEIV 239 (660) Q Consensus 160 ~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~g~~g~~i~v~i~ 239 (660) + .+....+. . . +.+ ...+. T Consensus 137 ----------~-------------~~~~~~d~-------~------------------~---v~~------~~~~~---- 155 (437) T protein:vir:10 137 ----------F-------------LDTVVMDL-------Q------------------T---VKV------LADLK---- 155 (437) T ss_pred ----------e-------------cCcceeee-------e------------------e---hhh------hhhhh---- Confidence 0 00000000 0 0 000 00000 Q ss_pred ccccccccceeeeeeccccccccccceeeeeccccCcccceeecccCCcccceeEEeeccccccccccccchhhhhhcCC Q lcl|Aclame:pro 240 SKADYDKGASAQLKIYPDGGTRYSTAKAIFGYGPQTDDQYAIIVRRNDSVVQSVVLSTKRGERDIYGSNIFIDDFFAKGA 319 (660) Q Consensus 240 s~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~e~~~v~~~~~~~~~~~~~~~~~~~~~~g~ 319 (660) ... .+. + ++. T Consensus 156 ------~n~---------------------------------~v~--------~-----------------------~~~ 165 (437) T protein:vir:10 156 ------NNA---------------------------------LVE--------F-----------------------SGT 165 (437) T ss_pred ------hhc---------------------------------ccc--------c-----------------------ccc Confidence 000 000 0 000 Q ss_pred ceEEEEEecCCCcccceeeeeeccccccccccchhhhhhhhhhhhhhhcCcceeecccccCCchhhHHHHHHHHHHHHhh Q lcl|Aclame:pro 320 SNYIFATAQGWPKGFSGVIKLNGGLSSNETVEAGDLMEAWDLFADRESVNAQLFIAGSCAGESLEVASTVQKHVVAIGDS 399 (660) Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 399 (660) .. .......++.||.++. ++..++..+++.+ +.++.+.+.++. ...+++.++.+||++ T Consensus 166 ~~----------l~~~a~~~LtGG~dg~--~t~~dy~~al~~l---e~~~~n~l~~~~-------~d~~~~t~~~~~ik~ 223 (437) T protein:vir:10 166 GE----------LQPVAGAKLTGGTDGA--ISTQDYLEYFKAL---ETVEFNYMALPV-------EDASIKKAAINFIKR 223 (437) T ss_pred cc----------cccccceeeeccccCC--CChhHHHHHHHHh---ccCcceEEEecC-------CChhHHHHHHHHHHH Confidence 00 0000112466676663 3445566555554 444444443332 123467788888887 Q ss_pred ccCeEEEeccccceEEecCCCCcHHHHHHHhhhcccccccccccCcceEEEEechhcccccccccceeechHHHHHHHHH Q lcl|Aclame:pro 400 RQDCLVLCSPPRAAVVGIPVNRAVDNLVDWRTASGTYTDNNFNISSTYAAIDGNYKYQYDKYNDVNRWVPLAADIAGLCA 479 (660) Q Consensus 400 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~p~~~~~d~~~~~~~~~p~s~~~AG~~a 479 (660) +++.- .....+++. .... ++...+-+.+-....|. ...--.-.++.+||++| T Consensus 224 ~r~~~---g~~~~~V~~-~~~~----------------------d~e~Iin~~n~~~~~~~--~~~~~~~~~a~vAG~~A 275 (437) T protein:vir:10 224 MREDE---GLGAQLVVA-DSDA----------------------DSEAVINVKNGVILSDK--TVIDKTKATVWVAAASA 275 (437) T ss_pred HHhcc---CceEEEEeC-CCCC----------------------CCceEEEeecceeecCc--ceechhhHHHHHHHHhc Confidence 76421 001111111 1110 11112222222221111 00000113578889999 Q ss_pred HhhccCCceecccceeeceeeecccccccCChhhhhhhccccceEEEEecCCeEEEecceecC----CCCcccceehhhH Q lcl|Aclame:pro 480 RTDNISQPWMSPAGYNRGQILNVIKLAIETRQAQRDRLYQEAINPVTGTGGDGYVLYGDKTAT----SVPSPFDRINVRR 555 (660) Q Consensus 480 ~~d~~~g~~~span~~~~~v~~~~~~~~~~~~~e~~~Ln~~gin~i~~~~g~G~~~wG~rT~~----~~~~~~~~i~vrR 555 (660) ..+ +++|+.|+.+.++. +....++++|++.|.++|+.++.+..++-+.++|-.|+. ..+.+|++|.++| T Consensus 276 g~~----~~~S~t~~~~~~~~---~v~~~~t~~e~~~~i~~G~~vl~~~~~~v~i~~gInTltt~~~~~~~~~~ki~vir 348 (437) T protein:vir:10 276 NAG----VEKSLTYEKYEDSV---DVVGRLSHTETEDALLKGQFVFTARRGRAVVEQDINSHVSFTIEKNQDFRKNRILR 348 (437) T ss_pred cCc----cccCccccccCCcc---cccccCCHHHHHHHHhCCcEEEEEeCCeEEEEEccccccccCCCCCchhhhhhHHH Confidence 874 67799999876543 445688999999999999999976544334458877763 3356899999999 Q ss_pred HHHHHHHHHHHHHH-HHhhc-CCCHHHHHHHHHHHHHHHHHHHhcCCeeeEEEEEecCCCCHHHhhCCEEEEEEEEEecC Q lcl|Aclame:pro 556 LFNMVKTNIGSASK-YRLFE-LNNAFTRSSFRTETSQYLQGIKALGGVYNFKVVCDTTNNTPAVIDRNEFVATFYLQPAR 633 (660) Q Consensus 556 ~~~~i~~~~~~~~~-~~v~e-pn~~~~~~~i~~~i~~~l~~l~~~gal~g~~v~~d~~~nt~~~i~~G~~~~~i~~~p~~ 633 (660) ++|+|.+.|++.+. +|+++ |||...|..++..|..||.+|+++|+|.+|.+...+..+. .....+++.+.++|+. T Consensus 349 ~~D~i~~di~~~~~~~yiGk~~N~~~~r~~~~~~i~~yl~~l~~~g~I~~~~~~d~~v~~~---~~~~~v~v~~~v~~~d 425 (437) T protein:vir:10 349 TLDDIVNDTRYAFSEYFLGKVSNNEDGRQAFKANRIRYFKDLEARGAIEDFKVEDIEVLRG---ELKESVVVNVKVKPVD 425 (437) T ss_pred HHHHHHHHHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCceeEEeecC---CCCCEEEEEEEEEEee Confidence 99999999999877 59997 7999999999999999999999999999998876654322 2346789999999999 Q ss_pred cceEEEEEEEEe Q lcl|Aclame:pro 634 SINYITLNFVAT 645 (660) Q Consensus 634 p~e~i~~~~~~~ 645 (660) +||+|.+++... T Consensus 426 ame~iy~ti~v~ 437 (437) T protein:vir:10 426 SMEKLYMTVTVE 437 (437) T ss_pred eeeeEEEEEEec Confidence 999999998887 No 44 >protein:vir:101326 Length: 529 # NCBI annotation: gp22 # Family: family:all:9453 # MgeID: mge:1512 # MgeName: P1 # Cross-refs: genbank:acc:YP_006525;genbank:gi:46401679;genbank:GeneID:2777386 Probab=100.00 E-value=7.7e-45 Score=262.44 Aligned_cols=494 Identities=13% Similarity=0.131 Sum_probs=314.0 Q ss_pred Cc-c-------ccCceEEEEec--CC-cccccCCcCceeEEeecccCCCCccEEec--CHHHHHHHcCCcCCcchhHHHH Q lcl|Aclame:pro 1 MA-L-------LSPGVELKETT--VQ-STVVNNSTGTAALAGKFQWGPAFQIKQIT--DEVALVDMFGTPNTDTADYFMS 67 (660) Q Consensus 1 ~~-~-------~~PGVyveE~~--~~-~~i~gv~Ts~~afvG~~~~Gpv~~p~~i~--s~~e~~~~fG~~~~~~~~~~~v 67 (660) |. | -..||.|.+++ -+ ..-.|+.+++.|+||.|+||++++|.+|| +|.+|.-.++++....+.-+++ T Consensus 1 ~~~ysi~q~ig~aSGvav~pi~~d~t~~~~~g~g~~v~a~Vgif~RG~i~k~~~Vt~~n~~~~LGep~~~~~ga~~E~~~ 80 (529) T protein:vir:10 1 MSQYSIQQSLGNASGVAVSPINADATLSTGVALNSSLWAGIGVFARGKPFTVLAVTESNYEDVLGEPLKPSSGSQFEPIR 80 (529) T ss_pred CCceehhhhhhhhcccccCCcCcccccchheecCceEEEEEEEeecCCCcceEEEchhHHHHHhccccCCCcchhhhhHh Confidence 22 2 26899999985 33 33467899999999999999999999999 9999999999999888999999 Q ss_pred HHHHHhcCCEEEEEEccCccccccccccccccccccccccccccccceeEEeccccccccccceeeeecCCceeeEEeec Q lcl|Aclame:pro 68 AMNFLQYGNDLRVVRAVDRDTAKNSSPVAGNINFTISSAGTNYRVGDKVVVKYSTDIIEPDGEVTSVDSDGKILNIFIPS 147 (660) Q Consensus 68 ~~~f~ngG~~~~vvRv~~~~~~~~a~~~~~~l~~t~~~~g~~~~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 147 (660) ..|+.-+++.|||||++..+.+....... ..+.. ..+. ..++... . . ..|....+.... T Consensus 81 h~~eA~~~~s~yVVRvv~~dak~p~i~~~--------~~~~~--~~s~--~~~s~~~-------~-l-~~G~~~~iy~~D 139 (529) T protein:vir:10 81 HVYEAIQQTSGYVVRAVPDDAKFPIIMFD--------ESGEP--AYSA--LPYGSEI-------E-L-DSGEAFAIYVDD 139 (529) T ss_pred hhhhhhcCCceEEEEEcccccCCceEEec--------CCccc--hhhc--ccccccc-------c-c-cccceEEEEEec Confidence 99998777789999998766554322111 00100 0000 0000000 0 0 011111111110 Q ss_pred ccccccccccccccccccceeeeeeccccccceeeeecccccccccccccccccccccccceeeeccccccccccccccc Q lcl|Aclame:pro 148 GKIIAKAKEIGEYPELGSNWTAEMSGSSSGLSAVITIDSVVMDSGILLTEVETSEEAITSLTFQESIKKYGVPGVVALYP 227 (660) Q Consensus 148 ~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ 227 (660) ++. . .....+..+. ..-+++ T Consensus 140 gd~---------~--~s~~~~l~i~-------------~~~ads------------------------------------ 159 (529) T protein:vir:10 140 GDP---------C--ISPTRELTIE-------------TATADS------------------------------------ 159 (529) T ss_pred CcC---------c--cCCceEEEEE-------------eecccc------------------------------------ Confidence 000 0 0000000000 000000 Q ss_pred ccccccccccccccccccccceeeeeeccccccccccceeeeeccccCcccceeecc-cCCcccceeEEeeccccccccc Q lcl|Aclame:pro 228 GELGDQLEIEIVSKADYDKGASAQLKIYPDGGTRYSTAKAIFGYGPQTDDQYAIIVR-RNDSVVQSVVLSTKRGERDIYG 306 (660) Q Consensus 228 g~~g~~i~v~i~s~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~~g~~~e~~~v~~~~~~~~~~~ 306 (660) +|+.--. ..++..+. -.+..+|+|+++.+.++.+..+ T Consensus 160 --~g~e~~~----------------------------------------l~~~~~~~~g~~~~let~~~sl~~~a~dd~G 197 (529) T protein:vir:10 160 --AGNERFL----------------------------------------LKLTQTTSLGVVTTLETHTVSLAEEAKDDMG 197 (529) T ss_pred --CCCccce----------------------------------------eeEEEEeecCCceEEEEEEeeeeechhhhcC Confidence 0000000 00000000 0233457777777777888888 Q ss_pred cccchhhhhhcCCceEEEEEecCCCcc----cceeeeeeccccccc-cccchhhhhhhhhhhhhhhcCcceeecccccCC Q lcl|Aclame:pro 307 SNIFIDDFFAKGASNYIFATAQGWPKG----FSGVIKLNGGLSSNE-TVEAGDLMEAWDLFADRESVNAQLFIAGSCAGE 381 (660) Q Consensus 307 ~~~~~~~~~~~g~~~~~~~~~~~~~~~----~~~~~~~~gg~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 381 (660) ...++...+++....+.-+........ ......+.+|+|+.. .++..++..++..|..-.- +-..++..++ T Consensus 198 ~~~yl~svle~~s~~l~ai~~~e~~~t~~~~t~~d~~f~~GtdG~~~~i~s~~y~~A~~~L~n~p~-d~~~il~~g~--- 273 (529) T protein:vir:10 198 RLCYLPTALEARSKYLRAVVNEELISTAKVTNKKSLAFTGGTNGDQSKISTAAYLRAVKVLNNAPY-MYTAVLGLGC--- 273 (529) T ss_pred CccchhHHHhhccCceeeeeeeccccccchhhhhhhhccCCccccccccchHHHHHHHHHhcCCcc-eeeeeeccCC--- Confidence 888887777776655443222221111 112246788888754 3555666666665543321 2223343333 Q ss_pred chhhHHHHHHHHHHHHhhccCeEEEeccccceEEecCCCCcHHHHHHHhhhcccccccccccCcceEEEEechhcccccc Q lcl|Aclame:pro 382 SLEVASTVQKHVVAIGDSRQDCLVLCSPPRAAVVGIPVNRAVDNLVDWRTASGTYTDNNFNISSTYAAIDGNYKYQYDKY 461 (660) Q Consensus 382 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~p~~~~~d~~ 461 (660) ...++..+|+.+|++++ +.++.|.|+..|++++++|++..+..+.+.. .. +.++|||. ..||. T Consensus 274 ---y~~a~I~~L~~ic~~~~---------~d~f~DV~~~LT~~aA~~~~e~~gl~~~~~~--~~--s~y~~P~~-~~D~~ 336 (529) T protein:vir:10 274 ---YDNAAITALGKICADRL---------IDGFFDVKPTLTYAEALPAVEDTGLLGTDYV--SC--SVYHYPFS-CKDKW 336 (529) T ss_pred ---ccHHHHHHHHHHHhhhh---------hcEEEcCCCCcCHHHHHHHHHhcCccccCce--ee--EEEEccee-ecccc Confidence 23467899999996653 2345688999999999999999877544332 11 35788987 88999 Q ss_pred cccceeechHHH--HHHH--HHHhhccCCceecccceeeceeeec-ccccccCChhhhhhhccccceEEEEecCCeEEEe Q lcl|Aclame:pro 462 NDVNRWVPLAAD--IAGL--CARTDNISQPWMSPAGYNRGQILNV-IKLAIETRQAQRDRLYQEAINPVTGTGGDGYVLY 536 (660) Q Consensus 462 ~~~~~~~p~s~~--~AG~--~a~~d~~~g~~~span~~~~~v~~~-~~~~~~~~~~e~~~Ln~~gin~i~~~~g~G~~~w 536 (660) ++....+++||. .|+. +++.....|+|++|||+..+.|... +...+..++.|...|-.++||++..-.++++.+- T Consensus 337 tg~k~~~GlsG~A~~akargv~~na~v~g~hY~pAGe~r~~inr~~I~~ly~~d~~e~~~lv~~riNPV~~~~~g~~~id 416 (529) T protein:vir:10 337 TQSRVVFGLSGVAYAAKARGVKKNSDVGGWHYSPAGEERAVIARASIQPLYPEDTPDEEAMVKGRLNKVSVGTSGQMIID 416 (529) T ss_pred ccCceeeCCCcceeeccccceeecccccccccccCCCccceeecccceeccCCCccCHHHHHhhccCeeeeeccCcceee Confidence 999999999984 3332 2333334455999999987544331 2344666777788888999998876555555443 Q ss_pred cceecCCCCcccceehhhHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhcCCeee-----------EE Q lcl|Aclame:pro 537 GDKTATSVPSPFDRINVRRLFNMVKTNIGSASKYRLFELNNAFTRSSFRTETSQYLQGIKALGGVYN-----------FK 605 (660) Q Consensus 537 G~rT~~~~~~~~~~i~vrR~~~~i~~~~~~~~~~~v~epn~~~~~~~i~~~i~~~l~~l~~~gal~g-----------~~ 605 (660) .+-|+...++.|||+|+++|+++|++.+.+..+|.+|||++..+|. +++-++.+|..+|+.|+|++ |+ T Consensus 417 DsLt~~~knny~R~~hv~~lmn~I~~~~~k~a~~~~~~Pd~it~~g-l~~~l~~~L~r~~asgalv~prdp~~~G~epy~ 495 (529) T protein:vir:10 417 DALTCCTQDNYLHFQHVPSLMNAISRFFVQLARQMKHSPDGITAAG-LTKGMTKLLDRFVASGALVAPRDPDADGTEPYV 495 (529) T ss_pred eeeceeeeCCchhhhhHHHHHHHHHHHHHHHHHHHhhCCChHHHHH-HHHhHHHHHHHHHhcCceecccCccCCCCCceE Confidence 4444444567999999999999999999999999999999999888 99999999999999999986 66 Q ss_pred EEEecCCCCHHHhhCCEEEEEEEEEecCcceEEEEEEEEee Q lcl|Aclame:pro 606 VVCDTTNNTPAVIDRNEFVATFYLQPARSINYITLNFVATA 646 (660) Q Consensus 606 v~~d~~~nt~~~i~~G~~~~~i~~~p~~p~e~i~~~~~~~~ 646 (660) +++ +| .+.++|.+++.++|..-++.|.+.=.-.+ T Consensus 496 ~~V-----~q--~d~D~~~v~~~~~ptGv~Rri~~~p~l~~ 529 (529) T protein:vir:10 496 LKV-----TQ--AEFDKWEVVWACCPTGVARRIQGVPLLIK 529 (529) T ss_pred EEE-----ee--cccCeEEEEEEeecCCceeeEEeeeeecC Confidence 666 34 44488999999999999998876522223 No 45 >protein:vir:105470 Length: 451 # NCBI annotation: putative phage sheath tail protein # Family: family:all:632 # MgeID: mge:1502 # MgeName: KC5a # Cross-refs: genbank:acc:YP_529880;genbank:gi:90592620;genbank:GeneID:3974534 Probab=100.00 E-value=9.3e-41 Score=240.04 Aligned_cols=429 Identities=15% Similarity=0.122 Sum_probs=249.7 Q ss_pred CccccCceEEEEec-CCcccccCCcCceeEEeecc-cCCCCccEEecCHHHHHHHcCCcCCcchhHHHHHHHHHhcCCEE Q lcl|Aclame:pro 1 MALLSPGVELKETT-VQSTVVNNSTGTAALAGKFQ-WGPAFQIKQITDEVALVDMFGTPNTDTADYFMSAMNFLQYGNDL 78 (660) Q Consensus 1 ~~~~~PGVyveE~~-~~~~i~gv~Ts~~afvG~~~-~Gpv~~p~~i~s~~e~~~~fG~~~~~~~~~~~v~~~f~ngG~~~ 78 (660) .+=.-|||||||++ +.+++.|++|++++|+|.+. ||| ++|+.|+|+.||++.||......-+ .+++.| ++||++| T Consensus 9 ~~K~~PGvYi~~~~~~~~~~~~~~~~~~~~i~~~~~~g~-~~~v~i~~~~d~~~~fG~~~~~~~~-~~~~~~-~~g~~~v 85 (451) T protein:vir:10 9 QDKRRPGTYINVVGNGQREAASSLGRVLLIRDKGLGWGK-NGVIEVEANSDFTKKLGTTLDDPSL-TALKET-LKGASKV 85 (451) T ss_pred ceeecCceEEEEeccCcceeeccCCcEEEEEeeecCCCC-cccEEeecHHHHHHHcCCcccchhH-HHHHHH-hcCCcEE Confidence 66679999999995 78999999999999999665 666 7899999999999999975533211 245555 5789999 Q ss_pred EEEEccCccccccccccccccccccccccccccccceeEEeccccccccccceeeeecCCceeeEEeecccccccccccc Q lcl|Aclame:pro 79 RVVRAVDRDTAKNSSPVAGNINFTISSAGTNYRVGDKVVVKYSTDIIEPDGEVTSVDSDGKILNIFIPSGKIIAKAKEIG 158 (660) Q Consensus 79 ~vvRv~~~~~~~~a~~~~~~l~~t~~~~g~~~~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~a~~~~ 158 (660) |++|+.+++.+ .++.....+.+++..||. +|+.+++.+........ . T Consensus 86 ~~yrl~~g~~a-~~t~~~~~~~~~Aky~G~---~Gn~i~v~v~~~~~d~~-----------~------------------ 132 (451) T protein:vir:10 86 LVLNPNEGTAA-TLTKEGLPWTVTANYPGE---KGNQITVSVEVSPADQN-----------A------------------ 132 (451) T ss_pred EEEEcCCCceE-EEEeecCceEEEEeeCCc---CCceEEEEEecccCCcC-----------c------------------ Confidence 99999765433 222223344555555552 34444443322110000 0 Q ss_pred cccccccceeeeeeccccccceeeeecccccccccccccccccccccccceeeecccccccccccccccccccccccccc Q lcl|Aclame:pro 159 EYPELGSNWTAEMSGSSSGLSAVITIDSVVMDSGILLTEVETSEEAITSLTFQESIKKYGVPGVVALYPGELGDQLEIEI 238 (660) Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~g~~g~~i~v~i 238 (660) T Consensus 133 -------------------------------------------------------------------------------- 132 (451) T protein:vir:10 133 -------------------------------------------------------------------------------- 132 (451) T ss_pred -------------------------------------------------------------------------------- Confidence Q ss_pred cccccccccceeeeeeccccccccccceeeeeccccCcccceeecccCCcccceeEEeeccccccccccccchhhhhhcC Q lcl|Aclame:pro 239 VSKADYDKGASAQLKIYPDGGTRYSTAKAIFGYGPQTDDQYAIIVRRNDSVVQSVVLSTKRGERDIYGSNIFIDDFFAKG 318 (660) Q Consensus 239 ~s~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~e~~~v~~~~~~~~~~~~~~~~~~~~~~g 318 (660) +.+.+..++...+...+....-.. .. T Consensus 133 ----------------------------------------~~v~t~~g~~~vd~qtv~~~~~~e--------------l~ 158 (451) T protein:vir:10 133 ----------------------------------------ATVSTIFGTKLVDEQSIKFNELDK--------------FK 158 (451) T ss_pred ----------------------------------------eEEEEEECCeEEEEEEeeccchhh--------------cc Confidence 000000000000000000000000 00 Q ss_pred CceEEEEEe-cCCCcccceeeeeeccccc-cccccchhhhhhhhhhhhhhhcCcceeecccccCCchhhHHHHHHHHHHH Q lcl|Aclame:pro 319 ASNYIFATA-QGWPKGFSGVIKLNGGLSS-NETVEAGDLMEAWDLFADRESVNAQLFIAGSCAGESLEVASTVQKHVVAI 396 (660) Q Consensus 319 ~~~~~~~~~-~~~~~~~~~~~~~~gg~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 396 (660) .+.++.... ............+.++.++ ....+..++.. .|...|.+..+.+.++... ....++..+.++ T Consensus 159 ~nd~V~a~~~~~g~~~~~~~~~l~~~~~gg~~~~~~~~~~~---~l~~~e~~~~n~l~~~~~~-----~~~~i~~~~~a~ 230 (451) T protein:vir:10 159 GNDYITAKVVEEGSSKPVAFTNVSGTLTGGTTTESNKVESL---LNDALENEEYAVVTTAGFE-----PSSNMNKLVVEA 230 (451) T ss_pred CCceEEEEecccccccceeeeecccccccccccCCccchHH---HHHHhccceeeEEEEccCC-----CchHHHHHHHHH Confidence 000000000 0000000111112222111 11122222332 3444555554443332221 113466677778 Q ss_pred HhhccCeEEEeccccceEEecCCCCcHHHHHHHhhhcccccccccccCcceEEEEechhcccccccccceeech---HHH Q lcl|Aclame:pro 397 GDSRQDCLVLCSPPRAAVVGIPVNRAVDNLVDWRTASGTYTDNNFNISSTYAAIDGNYKYQYDKYNDVNRWVPL---AAD 473 (660) Q Consensus 397 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~p~~~~~d~~~~~~~~~p~---s~~ 473 (660) |+++++.- ..+..+++..+.... .+....+-+...+...| .+.+++ ++. T Consensus 231 ik~~r~~~---g~~~~aVl~~~~~~~--------------------~d~egiinv~n~~~~~d-----g~~~~~~~~~~~ 282 (451) T protein:vir:10 231 VKRLRENE---GRKVRGVIPTDADTT--------------------YNYEGISTVVNGYTLSD-----GTNVDVKDATGY 282 (451) T ss_pred HHHHHHhc---CCeEEEEecCccCCC--------------------CCCcceEEeecceEecC-----ceeechhhhHHH Confidence 87765320 001112221111111 12222233333332222 112232 588 Q ss_pred HHHHHHHhhccCCceecccceeeceeeecccccccCChhhhhhhccccceEEEEecCCeEEE-ecceecC----CCCccc Q lcl|Aclame:pro 474 IAGLCARTDNISQPWMSPAGYNRGQILNVIKLAIETRQAQRDRLYQEAINPVTGTGGDGYVL-YGDKTAT----SVPSPF 548 (660) Q Consensus 474 ~AG~~a~~d~~~g~~~span~~~~~v~~~~~~~~~~~~~e~~~Ln~~gin~i~~~~g~G~~~-wG~rT~~----~~~~~~ 548 (660) +||++|..+ +.+|+.|+.+.++ .+....++++|++.+.++|..+++...++++++ +|-.|+. ..+.+| T Consensus 283 vAG~~Ag~~----~~~S~T~~~~~~~---~~v~~~~t~~e~~~~i~~G~lvl~~~~g~~v~i~~~INTltt~~~~k~~~~ 355 (451) T protein:vir:10 283 FAGISASAD----VATSLTYFEVEDA---VSAYPKFDNEKTIKALDAGQIVFTTRPGQRVVIEQDINSLHKFTAEKPQAF 355 (451) T ss_pred HHHHHcccc----cccCccceecCCc---eeeeeeCCHHHHHHHHhCCeEEEEEEcCCeEEEEEccccceecCCCCCcch Confidence 899999874 6679999876554 444678999999999999999887667777765 8877763 335679 Q ss_pred ceehhhHHHHHHHHHHHHHHHH-Hhhc-CCCHHHHHHHHHHHHHHHHHHHhcCCeeeEEEEEecCCCCHHHhhCCEEEEE Q lcl|Aclame:pro 549 DRINVRRLFNMVKTNIGSASKY-RLFE-LNNAFTRSSFRTETSQYLQGIKALGGVYNFKVVCDTTNNTPAVIDRNEFVAT 626 (660) Q Consensus 549 ~~i~vrR~~~~i~~~~~~~~~~-~v~e-pn~~~~~~~i~~~i~~~l~~l~~~gal~g~~v~~d~~~nt~~~i~~G~~~~~ 626 (660) +.|.++|++|+|.+.+++.... |+++ |||...|..++..|..||.+|+++|+|..|... |.+. ........+++. T Consensus 356 ~ki~vir~~D~i~~di~~~~~~~yiGk~~N~~~gr~~~~~~i~~yl~~l~~~g~i~~~~~~-d~~v--~~~~~~~~v~v~ 432 (451) T protein:vir:10 356 SKNRVIRTLDEIATNTENTFERTYLGNVGNNAAGRDLFKADRIAYLTSLQNRNMIQSFANT-DITV--EAGNDMDSIVVN 432 (451) T ss_pred hhhhHHHHHHHHHHHHHHHhhhccceecCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCcc-ceEE--eecCCCCEEEEE Confidence 9999999999999999999864 8885 699999999999999999999999999998632 2111 111235679999 Q ss_pred EEEEecCcceEEEEEEEEe Q lcl|Aclame:pro 627 FYLQPARSINYITLNFVAT 645 (660) Q Consensus 627 i~~~p~~p~e~i~~~~~~~ 645 (660) +.++|+..||+|.+++..+ T Consensus 433 ~~v~pvdame~iy~t~~v~ 451 (451) T protein:vir:10 433 LAVTPVDAMEKLYMTMVVR 451 (451) T ss_pred EEEEEEeeeeeEEEEEEEc Confidence 9999999999999999887 No 46 >protein:vir:107310 Length: 581 # NCBI annotation: gp123 # Family: family:all:1196 # MgeID: mge:1550 # MgeName: Catera # Cross-refs: genbank:acc:YP_656131;genbank:gi:109393333;genbank:GeneID:4156791 Probab=100.00 E-value=3.7e-37 Score=220.33 Aligned_cols=511 Identities=14% Similarity=0.092 Sum_probs=227.5 Q ss_pred EEEEccCccccccccccccccccccccccccccccceeEEeccccccccccceeeeecCCc--eee--EEeecccccccc Q lcl|Aclame:pro 79 RVVRAVDRDTAKNSSPVAGNINFTISSAGTNYRVGDKVVVKYSTDIIEPDGEVTSVDSDGK--ILN--IFIPSGKIIAKA 154 (660) Q Consensus 79 ~vvRv~~~~~~~~a~~~~~~l~~t~~~~g~~~~~~~~~~v~~~~~~~~~~~~v~~~~~~~~--~~~--~~~~~~~~~~~a 154 (660) .-||+-.+.+. ..... .+ ..+ ..|....+... ..+..- .+++ ... ...|+..... . T Consensus 1 ~~~~~~~~~~~---~~~~~--~~--~~~----~~g~~~~~~~~-------~~i~g~-~~g~~g~~~s~~~~p~~~~~~-e 60 (581) T protein:vir:10 1 MAIDFSQYQTP---GVYTE--AV--GAP----QLGIRSSVPTA-------VAIFGT-AVGYQTYRESIRINPDTGETI-T 60 (581) T ss_pred Ceeeecccccc---chhhh--hc--ccc----ccceeeeeccc-------cccccc-cccccccccccccCCCCCCcc-c Confidence 33333222111 00000 00 000 01111111000 000000 0000 000 0000000000 0 Q ss_pred cccccccccccceeeeeeccccccceeeeeccccccc------------------cccccccc--ccccccccceeeecc Q lcl|Aclame:pro 155 KEIGEYPELGSNWTAEMSGSSSGLSAVITIDSVVMDS------------------GILLTEVE--TSEEAITSLTFQESI 214 (660) Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~------------------~~~~~~~~--~~~~~~~~~~~~~~~ 214 (660) ..+........+.+....+.+..+.+ .+...+.. ........+.+.... T Consensus 61 -----------~q~v~~~~~~t~GtFtLsf~G~tT~~I~~~asa~~v~~AL~~L~~i~~~~v~v~g~~g~~~~VtF~g~~ 129 (581) T protein:vir:10 61 -----------TQILALVGEPTGGSFKLSLAGEPTGNIPFNATQGQVQSALRALPNVEDDEVTVLGDPGGPWTVTFTKAV 129 (581) T ss_pred -----------eEEEEEEecCCCceEEEEeCceecccccccCCHHHHHHHHhccCCCCcceEEEECCCCceEEEEEcCCc Confidence 00000000000011111111100000 00000000 000000000010000 Q ss_pred cccccccccccccccccccccccccccccccc-c--c--------eeeeeeccccccccccceeee---------ecccc Q lcl|Aclame:pro 215 KKYGVPGVVALYPGELGDQLEIEIVSKADYDK-G--A--------SAQLKIYPDGGTRYSTAKAIF---------GYGPQ 274 (660) Q Consensus 215 ~~~~~~~~~a~~~g~~g~~i~v~i~s~~~~~~-~--~--------~~~~~v~~~~~~~~~~~~~~~---------~~~~~ 274 (660) ...... .... ..+....+.+........ . . ...............+..... ..... T Consensus 130 ~~l~~~-~~~l---t~g~~~~vtV~~~~~g~~~~~~~~s~~gi~~~~~~l~~~~~~~~~~~gsd~~~~~~~~~~~~~~~~ 205 (581) T protein:vir:10 130 AALTKD-VTGL---TGGDDPDLNIASEQTGVPAMNRALAKKGIKTDTIRVVNPNSGQVYVLGTDYVVTRVNAGEDGEANT 205 (581) T ss_pred cceeee-ecee---cCCCceeEEEeccccCcccccccccccccccccccccccccCcceeccccceeeecccCccccccc Confidence 000000 0000 000001111100000000 0 0 000000000000000000000 00000 Q ss_pred CcccceeecccCCcccceeE---Eeeccccccc--cc--------cccchhhhhhcCCceEEEEEecCCCcccceeeeee Q lcl|Aclame:pro 275 TDDQYAIIVRRNDSVVQSVV---LSTKRGERDI--YG--------SNIFIDDFFAKGASNYIFATAQGWPKGFSGVIKLN 341 (660) Q Consensus 275 ~~~~~~~~v~~~g~~~e~~~---v~~~~~~~~~--~~--------~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 341 (660) .++..+++....+.+.++.. ++....++.+ .. .......+...|+...-+...............+. T Consensus 206 ~~D~~t~~~~~~g~~~~~~~v~~~~~~~~d~~~~~~v~~~~~~~~~~~~~~~~~~~g~~~~~~t~~~~~~~tn~~~~~l~ 285 (581) T protein:vir:10 206 RDDLYTIQRVVDGGHIDPGDIVQLSYRYTDPNYHEVIRFTDPDDIQDFYGPAFDEAGNVQSEITLCAQLAITNGASTILA 285 (581) T ss_pred cccceeeeeeecccccccceEEEEEEEeecCCcceeEEeecCcchhhhhhhhhhccCccccchhhhheeeeecccceeEE Confidence 01111121112222111110 0100000000 00 00000001111110000000000000111123355 Q ss_pred ccccccc-cccchhhhhhhhhhhhhhhcCcceeecccccCCchhhHHHHHHHHHHHHhhccC----eEEEeccccceEEe Q lcl|Aclame:pro 342 GGLSSNE-TVEAGDLMEAWDLFADRESVNAQLFIAGSCAGESLEVASTVQKHVVAIGDSRQD----CLVLCSPPRAAVVG 416 (660) Q Consensus 342 gg~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~----~~~~~~~~~~~~~~ 416 (660) +|.++.. .++..++..+++.|+..+... ++++. ....+++.++.+||+++.+ +.+++. +.. T Consensus 286 ~gvd~~g~tvt~~dy~~Al~ale~~~~~~--ivv~~-------t~~~~v~a~l~ahv~~~s~~~~~~ravig-----V~g 351 (581) T protein:vir:10 286 CAVDPEGDTVTMGDYQNALNKFRDEDEIA--IIVAG-------TGAQPIQALVQQHVSAQSNNKYERRAILG-----MDG 351 (581) T ss_pred eeccCCCCccchHHHHHHHHHHhcCCceE--EEEeC-------CCCHHHHHHHHHHHHHHHhccCCcEEEEE-----ecC Confidence 6665532 367777877776665544322 23332 1224677888888877642 222221 111 Q ss_pred cCCCCcHHHHHHHhhhcccccccccccCcceEEEEechhcccccccc-cceeechHHHHHHHHHHhhccCCceeccccee Q lcl|Aclame:pro 417 IPVNRAVDNLVDWRTASGTYTDNNFNISSTYAAIDGNYKYQYDKYND-VNRWVPLAADIAGLCARTDNISQPWMSPAGYN 495 (660) Q Consensus 417 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~p~~~~~d~~~~-~~~~~p~s~~~AG~~a~~d~~~g~~~span~~ 495 (660) .+...+.++..+.. .++++.|.+++||+.++.+...+ ....+|+ .++|+.+|.+.....+++||.|++ T Consensus 352 ~~~~~~~~~~~~~a----------~~~n~~Rvvlv~p~~~~~~g~~~~~~v~lp~-y~~AA~vAGl~a~~~~~~slT~~~ 420 (581) T protein:vir:10 352 SVTPVPSATRIANA----------QSIKDQRVALISPSSFVYYAPELNREVVLGG-QFMAAAVAGKSVSAIAAMPLTRKV 420 (581) T ss_pred CCCCccHHHHHHhh----------ccCCCceEEEEecCceeecCcccCceeccch-hhHHHHHHHHhhccccccCccccc Confidence 22233444444332 24789999999999888766543 4444554 444555555555556888999998 Q ss_pred eceeeecccccccCChhhhhhhccccceEEEEecCCeEEE-ecceecCCCCcccceehhhHHHHHHHHHHHHHHH--HHh Q lcl|Aclame:pro 496 RGQILNVIKLAIETRQAQRDRLYQEAINPVTGTGGDGYVL-YGDKTATSVPSPFDRINVRRLFNMVKTNIGSASK--YRL 572 (660) Q Consensus 496 ~~~v~~~~~~~~~~~~~e~~~Ln~~gin~i~~~~g~G~~~-wG~rT~~~~~~~~~~i~vrR~~~~i~~~~~~~~~--~~v 572 (660) +.++. ++...+++.|++.|+++|+++++..+++++++ ||-+|+.++ .+|++|++||++|++.+.+++.++ +|+ T Consensus 421 i~gi~---~l~~~~s~~e~e~ll~~Gv~~l~~~~~~~v~Iv~gItT~~s~-~~~~~i~~iR~~D~v~~~ir~~~~~~~fI 496 (581) T protein:vir:10 421 IRGFS---GPAEVQRDGEKSRESSEGLMVIEKTPRNLVHVRHGVTTDPTS-LHTREWNIIGQQDVMVYRIRDYLDADGLI 496 (581) T ss_pred ccccc---cccccCCHHHHHHHHhCCeEEEEEecCCeEEEEeeeecCCCC-CcceeeeeehhhhHHHHHHHHHhhhhcCC Confidence 87664 45778899999999999999999999999986 555676655 479999999999999999999985 588 Q ss_pred hcCCCHHHHHHHHHHHHHHHHHHHhcCCeeeEEEEEecCCCCHHHhhCCEEEEEEEEEecCcceEEEEEEEEeecCccHH Q lcl|Aclame:pro 573 FELNNAFTRSSFRTETSQYLQGIKALGGVYNFKVVCDTTNNTPAVIDRNEFVATFYLQPARSINYITLNFVATATGADFD 652 (660) Q Consensus 573 ~epn~~~~~~~i~~~i~~~l~~l~~~gal~g~~v~~d~~~nt~~~i~~G~~~~~i~~~p~~p~e~i~~~~~~~~~~~~~~ 652 (660) +|||++.+|.+|+..+..||..||++|+|.||+.. +.++.+.+.+++++++.++|++|+|||.+|+......-.++ T Consensus 497 G~~n~~~~r~~ik~~i~~~L~~l~~~g~I~~~~~~----~~~~~~~~~d~v~V~i~v~Pv~~i~~I~vti~~~p~~~~~~ 572 (581) T protein:vir:10 497 GMPIYDTTIVQVKASAEAALVWLVDNNIIRGYRNL----KARQIERQPDVIEVRYEWRPAYPLNYIVVRYSIAPETGDIT 572 (581) T ss_pred CcccCHHHHHHHHHHHHHHHHHHHhcCcccCCccc----eeeeeecCCCEEEEEEEEEecccceEEEEEEEEecCCCceE Confidence 89999999999999999999999999999998643 24566688899999999999999999999999986554444 Q ss_pred HHHHhhcC Q lcl|Aclame:pro 653 ELIGAVGG 660 (660) Q Consensus 653 e~~~~v~~ 660 (660) -. |-| T Consensus 573 ~~---~~~ 577 (581) T protein:vir:10 573 ST---IEG 577 (581) T ss_pred EE---Eec Confidence 33 334 No 47 >protein:vir:7653 Length: 581 # NCBI annotation: gp124 # Family: family:all:1196 # MgeID: mge:148 # MgeName: Bxz1 # Cross-refs: genbank:acc:NP_818197;genbank:gi:29566631;genbank:GeneID:1259809 Probab=100.00 E-value=6.2e-37 Score=219.10 Aligned_cols=528 Identities=12% Similarity=0.058 Sum_probs=231.2 Q ss_pred CCcchhHHHHHH-HHH-----hcCCEEEE-EEccCccccccccccccccccccccccccccccceeEEeccccc-ccccc Q lcl|Aclame:pro 58 NTDTADYFMSAM-NFL-----QYGNDLRV-VRAVDRDTAKNSSPVAGNINFTISSAGTNYRVGDKVVVKYSTDI-IEPDG 129 (660) Q Consensus 58 ~~~~~~~~~v~~-~f~-----ngG~~~~v-vRv~~~~~~~~a~~~~~~l~~t~~~~g~~~~~~~~~~v~~~~~~-~~~~~ 129 (660) ..--+..+.... |=+ .+|.+|.+ +++ .+..... +++..+ .++...... ..... T Consensus 1 ~~~~~~~~~~~~~~t~~~~~~~~g~~~~~~~~~----------------~i~g~~~--g~~g~~-~s~r~~p~~~~~~ev 61 (581) T protein:vir:76 1 MAIDFSQYQTPGVYTEAVGAPQLGIRSSVPTAV----------------AIFGTAV--GYQTYR-ESIRINPDTGETITT 61 (581) T ss_pred CcccccccccchhhhhhccccccCcceeeeeee----------------eeccccc--cccccc-ceeeecCCCCCCCce Confidence 000000011111 111 11111111 000 0000000 111000 111110000 00000 Q ss_pred ceeeeecCCceeeEEeecccc------cccc--c----ccccccccccceeeeeeccccccceeeeeccccccccccccc Q lcl|Aclame:pro 130 EVTSVDSDGKILNIFIPSGKI------IAKA--K----EIGEYPELGSNWTAEMSGSSSGLSAVITIDSVVMDSGILLTE 197 (660) Q Consensus 130 ~v~~~~~~~~~~~~~~~~~~~------~~~a--~----~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~ 197 (660) +........ .-+.|.-+..+ ...+ . .+......+.. .+...+. ++....+.+.+.... .. .+ T Consensus 62 q~v~~~~~~-t~G~ftLt~~g~tT~~I~~~asa~~v~~AL~~L~~i~~~-~v~vtg~-~~~~~~V~F~g~~~~--~~-~~ 135 (581) T protein:vir:76 62 QILALVGEP-TGGSFKLSLAGEPTGNIPFNATQGQVQSALRALPNVEDD-EVTVLGD-PGGPWTVTFTKAVAA--LT-KD 135 (581) T ss_pred EEEEEeecC-CcceEEEEeCceeccccccCCCHHHHHHHHhhccCCCCc-eEEEEcC-CCceEEEEEcCCccc--ee-Ee Confidence 000000000 00000000000 0000 0 00000000000 0000000 000001111000000 00 00 Q ss_pred cccc-ccccccceeeeccccccccccccccccccccccccccccccccc--ccceeeeeeccccccccccceeeeecccc Q lcl|Aclame:pro 198 VETS-EEAITSLTFQESIKKYGVPGVVALYPGELGDQLEIEIVSKADYD--KGASAQLKIYPDGGTRYSTAKAIFGYGPQ 274 (660) Q Consensus 198 ~~~~-~~~~~~~~~~~~~~~~~~~~~~a~~~g~~g~~i~v~i~s~~~~~--~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 274 (660) .... ..........................|..++.+...-....... ..................... T Consensus 136 ~~~ltg~~~~~~~V~~~~~G~~~~~~~l~~~g~~~~~~~~~~s~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-------- 207 (581) T protein:vir:76 136 VTGLTGGDNPDLNIASEQTGVPAMNRALAKKGIKTDTIRVVNPNSGQVYVLGTDYVVTRVNAGEDGEANTRD-------- 207 (581) T ss_pred eeeeecCCcceeEEEEEecCcCCcCceeeeccccccccceeecCCcceeeecccccceeeccCcccceeeee-------- Confidence 0000 00000000000000000000000000000000000000000000 000000000000000000000 Q ss_pred CcccceeecccCCccc------------------ceeEEeeccccccccccccchhhhhhcCCceEEEEEecCCCcccce Q lcl|Aclame:pro 275 TDDQYAIIVRRNDSVV------------------QSVVLSTKRGERDIYGSNIFIDDFFAKGASNYIFATAQGWPKGFSG 336 (660) Q Consensus 275 ~~~~~~~~v~~~g~~~------------------e~~~v~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 336 (660) +.+++....++... +.+........ .......+...|+....+............ T Consensus 208 --~~~t~~~~~~g~~~~~~~i~~~~~~~~D~~~~~~v~~~~~~~~-----~~~~~~~~~~~g~~~~e~~~~~~~~~t~~~ 280 (581) T protein:vir:76 208 --DLYTIQRVVDGGHIDPGDIVQLSYRYTDPNYHEVIRFTDPDDI-----QDFYGPAFDEAGNVQSEITLCAQLAITNGA 280 (581) T ss_pred --eeeeeEeecccccccceeEEEEEEEeecCCccceEEEeccccc-----ccceeeehhhcCccccchhhhhheeecccc Confidence 00111111111100 11110000000 000000111111100000000000111112 Q ss_pred eeeeecccccc-ccccchhhhhhhhhhhhhhhcCcceeecccccCCchhhHHHHHHHHHHHHhhccC----eEEEecccc Q lcl|Aclame:pro 337 VIKLNGGLSSN-ETVEAGDLMEAWDLFADRESVNAQLFIAGSCAGESLEVASTVQKHVVAIGDSRQD----CLVLCSPPR 411 (660) Q Consensus 337 ~~~~~gg~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~----~~~~~~~~~ 411 (660) ...|.+|.++. ..++..++..+++.++..+... ++++. ....+++.++.+||+++.+ +.+++. T Consensus 281 ~~~l~~gvd~~g~tvt~~dy~~aL~ale~~~~~~--ivvp~-------t~~~~i~a~l~ahv~~~s~~~~~~ra~ig--- 348 (581) T protein:vir:76 281 STILACAVDPEGDTVTMGDYQNALNKFRDEDEIA--IIVAG-------TGAQPIQALVQQHVSAQSNNKYERRAILG--- 348 (581) T ss_pred ceEEEeeecCCCCccchHHHHHHHHHHhcCCeEE--EEEec-------CCChHHHHHHHHHHHHHHhccCCceEEEE--- Confidence 24466666653 3467778887776665544322 23332 1224577778888877642 222221 Q ss_pred ceEEecCCCCcHHHHHHHhhhcccccccccccCcceEEEEechhcccccccccceeechHHHHHHHHHHhhccCCceecc Q lcl|Aclame:pro 412 AAVVGIPVNRAVDNLVDWRTASGTYTDNNFNISSTYAAIDGNYKYQYDKYNDVNRWVPLAADIAGLCARTDNISQPWMSP 491 (660) Q Consensus 412 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~p~~~~~d~~~~~~~~~p~s~~~AG~~a~~d~~~g~~~sp 491 (660) +...+...+.+++.+.. ..+++.|.+++|||.++++..........|..++|+.+|.+.....+++|| T Consensus 349 --v~g~~~~~~~~~~~~~a----------~~~ns~Rvvlv~p~~~~~~g~~~~~~~~lp~~~~AA~vAG~~a~~~~~~sl 416 (581) T protein:vir:76 349 --MDGSVTPVPSATRIANA----------QSIKDQRVALISPSSFVYYAPELNREVVLGGQFMAAAVAGKSVSAIAAMPL 416 (581) T ss_pred --eeCCCCCchHHHHHHhh----------cccCCCcEEEEEcCceEeccccCCcceecchhhhhhhHHhhhhccccccCc Confidence 11122233444444332 247899999999999888766444444445566677777777777899999 Q ss_pred cceeeceeeecccccccCChhhhhhhccccceEEEEecCCeEEE-ecceecCCCCcccceehhhHHHHHHHHHHHHHHH- Q lcl|Aclame:pro 492 AGYNRGQILNVIKLAIETRQAQRDRLYQEAINPVTGTGGDGYVL-YGDKTATSVPSPFDRINVRRLFNMVKTNIGSASK- 569 (660) Q Consensus 492 an~~~~~v~~~~~~~~~~~~~e~~~Ln~~gin~i~~~~g~G~~~-wG~rT~~~~~~~~~~i~vrR~~~~i~~~~~~~~~- 569 (660) .|+++.++ .++...+++.|++.|+++|+++++.++++++++ ||-+|+.+++ +|++|++||++|++++.+++.++ T Consensus 417 T~~~i~g~---~~~~~~~s~~e~e~ll~~Gv~~l~~~~~~~v~Iv~gItT~~s~~-~~k~i~viR~~D~v~~~vr~~~~~ 492 (581) T protein:vir:76 417 TRKVIRGF---SGPAEVQRDGEKSRESSEGLMVIEKTPRNLVHVRHGVTTDPTSL-HTREWNIIGQQDVMVYRIRDYLDA 492 (581) T ss_pred cccccccc---ccccccCCHHHHHHHHhCCeEEEEEecCCeEEEEEeeecCCCCC-ccceeeehhhhHHHHHHHHHHHhh Confidence 99988765 455778899999999999999999999999975 7778876664 79999999999999999999986 Q ss_pred -HHhhcCCCHHHHHHHHHHHHHHHHHHHhcCCeeeEEEEEecCCCCHHHhhCCEEEEEEEEEecCcceEEEEEEEEeecC Q lcl|Aclame:pro 570 -YRLFELNNAFTRSSFRTETSQYLQGIKALGGVYNFKVVCDTTNNTPAVIDRNEFVATFYLQPARSINYITLNFVATATG 648 (660) Q Consensus 570 -~~v~epn~~~~~~~i~~~i~~~l~~l~~~gal~g~~v~~d~~~nt~~~i~~G~~~~~i~~~p~~p~e~i~~~~~~~~~~ 648 (660) +|++|||++.+|.+||..+..||..||+.|+|.||... +.++.+++.+++++++.++|++|+|||.+++...... T Consensus 493 ~~fiG~~n~~~~r~~ik~~i~~~L~~l~~~g~I~g~~~~----~~~~~~~~~d~v~V~i~v~Pv~~ie~I~vt~~~~p~~ 568 (581) T protein:vir:76 493 DGLIGMPIYDTTIVQVKASAEAALVWLVDNNIIRGYRNL----KARQIERQPDVIEVRYEWRPAYPLNYIVVRYSIAPET 568 (581) T ss_pred hcCCCcccChHHHHHHHHHHHHHHHHHHhcCcccCcccc----eeeEEecCCCEEEEEEEEEecccceEEEEEEEEeeCC Confidence 58889999999999999999999999999999998632 3466677889999999999999999999999998665 Q ss_pred ccHHHHHHhhcC Q lcl|Aclame:pro 649 ADFDELIGAVGG 660 (660) Q Consensus 649 ~~~~e~~~~v~~ 660 (660) -.++-. |-| T Consensus 569 ~~~~~~---~~~ 577 (581) T protein:vir:76 569 GDITST---IEG 577 (581) T ss_pred CceEEE---Eec Confidence 554433 334 No 48 >protein:vir:78986 Length: 436 # NCBI annotation: putative sheath tail protein # Family: family:all:632 # MgeID: mge:1861 # MgeName: phiC2 # Cross-refs: genbank:acc:YP_001110731;genbank:gi:134287348;genbank:GeneID:4955160 Probab=99.95 E-value=9.1e-29 Score=174.30 Aligned_cols=410 Identities=14% Similarity=0.124 Sum_probs=244.7 Q ss_pred CccccCceEEEEec-CCcccccCCcCceeEEeecccCCCCccEEecC---HHHHHHHcCCcCCcchhHHHHHHHHHhcCC Q lcl|Aclame:pro 1 MALLSPGVELKETT-VQSTVVNNSTGTAALAGKFQWGPAFQIKQITD---EVALVDMFGTPNTDTADYFMSAMNFLQYGN 76 (660) Q Consensus 1 ~~~~~PGVyveE~~-~~~~i~gv~Ts~~afvG~~~~Gpv~~p~~i~s---~~e~~~~fG~~~~~~~~~~~v~~~f~ngG~ 76 (660) .+=.-||+|++.++ ....+++....+.++...+.|||+++++.|++ ..++...||.. ...+....++..| .|+. T Consensus 11 ~~K~~PG~Y~n~~~~~~~~~~~~~rGi~a~p~~~~wGp~~~v~~i~~~~~~~~~~~~~G~~-~~~~~~~~l~~~~-~~~~ 88 (436) T protein:vir:78 11 QNKVLPGSYINFVSATRATSSLSDRGIVAMPLELDWGIDEEVFQVTSDDFEKYSTKYFGYD-YTHEKLKGLRDLF-KNIR 88 (436) T ss_pred ceeecCceEEEEEecCcceeeccCCeEEEEEEEecCCCCceeEEeecccchHHHHHHhcCc-cchHHHHHHHHHh-cCCC Confidence 34457999999997 56667899999999999999999999999999 56899999953 3333344566655 6678 Q ss_pred EEEEEEccCccccccccccccccccccccccccccccceeEEeccccccccccceeeeecCCceeeEEeecccccccccc Q lcl|Aclame:pro 77 DLRVVRAVDRDTAKNSSPVAGNINFTISSAGTNYRVGDKVVVKYSTDIIEPDGEVTSVDSDGKILNIFIPSGKIIAKAKE 156 (660) Q Consensus 77 ~~~vvRv~~~~~~~~a~~~~~~l~~t~~~~g~~~~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~a~~ 156 (660) .+|+.|+.++..+.+. .+++..+|. .|+.+++.+........ .. T Consensus 89 tv~~yrl~~G~~a~~~-------v~~Aky~g~---~gn~i~v~v~~~~~d~~-----------~~--------------- 132 (436) T protein:vir:78 89 LGYFYKLNKGVKASCS-------IATARCSGI---RGNDLKVIVTTNIDDNA-----------KF--------------- 132 (436) T ss_pred EEEEEECCCcceeeee-------eeeeecCCC---CCcEEEEEecccccccC-----------ce--------------- Confidence 9999999754332221 123333332 23322222211100000 00 Q ss_pred cccccccccceeeeeeccccccceeeeecccccccccccccccccccccccceeeecccccccccccccccccccccccc Q lcl|Aclame:pro 157 IGEYPELGSNWTAEMSGSSSGLSAVITIDSVVMDSGILLTEVETSEEAITSLTFQESIKKYGVPGVVALYPGELGDQLEI 236 (660) Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~g~~g~~i~v 236 (660) +.. .+..... .. .-.+ T Consensus 133 ----------------------------------------dv~---------~~~g~~~---~d------------~~~~ 148 (436) T protein:vir:78 133 ----------------------------------------DVV---------TLLDNKK---VD------------TQIA 148 (436) T ss_pred ----------------------------------------EEE---------EEecchh---hh------------hhhH Confidence 000 0000000 00 0000 Q ss_pred cccccccccccceeeeeeccccccccccceeeeeccccCcccceeecccCCcccceeEEeeccccccccccccchhhhhh Q lcl|Aclame:pro 237 EIVSKADYDKGASAQLKIYPDGGTRYSTAKAIFGYGPQTDDQYAIIVRRNDSVVQSVVLSTKRGERDIYGSNIFIDDFFA 316 (660) Q Consensus 237 ~i~s~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~e~~~v~~~~~~~~~~~~~~~~~~~~~ 316 (660) ... . .+.. T Consensus 149 ~~~--~---------------------------------------------~l~~------------------------- 156 (436) T protein:vir:78 149 KVI--T---------------------------------------------ELQD------------------------- 156 (436) T ss_pred HHH--h---------------------------------------------hccC------------------------- Confidence 000 0 0000 Q ss_pred cCCceEEEEEecCCCcccceeeeeeccccccccccchhhhhhhhhhhhhhhcCcceeecccccCCchhhHHHHHHHHHHH Q lcl|Aclame:pro 317 KGASNYIFATAQGWPKGFSGVIKLNGGLSSNETVEAGDLMEAWDLFADRESVNAQLFIAGSCAGESLEVASTVQKHVVAI 396 (660) Q Consensus 317 ~g~~~~~~~~~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 396 (660) +.++.....+ .........|.||.++.. ++..++..+++.+ |.+..+.+.++.. ..+++..+.++ T Consensus 157 ---n~~V~~~~~g-~la~~a~~~LtGG~dG~~-~T~~dy~~al~~l---e~~~fn~l~~~~~-------d~~~~~~~~a~ 221 (436) T protein:vir:78 157 ---NDYVTWKKEA-TLEATAGLTFTNGTNGEA-VTGTEYQAFLDKI---ESYSFNALGCLAT-------TAEIKSLFVEF 221 (436) T ss_pred ---CceEEEEecc-cccccceeeeeccccccc-cchHHHHHHHHHH---cccceeEEEecCC-------ChHHHHHHHHH Confidence 0000000000 011112345788888753 5667777666554 4444444433321 13567777888 Q ss_pred HhhccCeEEEeccccceEEecCCCCcHHHHHHHhhhcccccccccccCcceEEEEechhcccccccccceee--chHHHH Q lcl|Aclame:pro 397 GDSRQDCLVLCSPPRAAVVGIPVNRAVDNLVDWRTASGTYTDNNFNISSTYAAIDGNYKYQYDKYNDVNRWV--PLAADI 474 (660) Q Consensus 397 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~p~~~~~d~~~~~~~~~--p~s~~~ 474 (660) +.++++.. +....+++...... +....+-+... ..+. .+- -.++.+ T Consensus 222 ikr~re~~---g~~~~aV~~~~~~~----------------------d~EgIInv~n~------v~g~-~~~~~~~~a~v 269 (436) T protein:vir:78 222 TKRMRDKV---GAKFQTVLYKKNDA----------------------DYEGVVSVENK------IKDT-GLLESSLIYWT 269 (436) T ss_pred HHHHHhhc---CCeEEEEecCCCCC----------------------CCceEEEeecc------cCCc-eechhHHHHHH Confidence 87776421 00111111100011 11111111111 1111 111 146888 Q ss_pred HHHHHHhhccCCceecccceeeceeeecccccccCChhhhhhhccccceEEEEecCCeEEEecce-ec----CCCCcccc Q lcl|Aclame:pro 475 AGLCARTDNISQPWMSPAGYNRGQILNVIKLAIETRQAQRDRLYQEAINPVTGTGGDGYVLYGDK-TA----TSVPSPFD 549 (660) Q Consensus 475 AG~~a~~d~~~g~~~span~~~~~v~~~~~~~~~~~~~e~~~Ln~~gin~i~~~~g~G~~~wG~r-T~----~~~~~~~~ 549 (660) ||++|..+ +.+|+.|+.+.++ .+....++++|++.+.++|..++.+. ++++++--+- |+ ...+.+|+ T Consensus 270 AG~~Ag~~----~~~S~T~~~~~~~---~~v~~~~t~~e~~~ai~~G~lvl~~d-~~~v~I~~~VNTltt~~~~k~~~~~ 341 (436) T protein:vir:78 270 TGAIAGCD----INKSNTNKRYDGE---FDVDVNYTQIHLEEALKTGKFIFHKV-GDEVHVLEDINTFVSFTDEKNDDFS 341 (436) T ss_pred HHHHhcCc----cccCccceecCcc---ccccccCCHHHHHHHHhCCeEEEEEe-CCeEEEEEccccceecCCCCCcchh Confidence 99999886 4558999876544 34466789999999999999988754 5566554443 33 23456899 Q ss_pred eehhhHHHHHHHHHHHHHHH-HHhhc-CCCHHHHHHHHHHHHHHHHHHHhcCCeeeEEE---EEecCCCCHHHhhCCEEE Q lcl|Aclame:pro 550 RINVRRLFNMVKTNIGSASK-YRLFE-LNNAFTRSSFRTETSQYLQGIKALGGVYNFKV---VCDTTNNTPAVIDRNEFV 624 (660) Q Consensus 550 ~i~vrR~~~~i~~~~~~~~~-~~v~e-pn~~~~~~~i~~~i~~~l~~l~~~gal~g~~v---~~d~~~nt~~~i~~G~~~ 624 (660) .|.++|++|+|.+.+++... .|+++ ||+..-|..++..|+.||.+|.++|+|..|.. ..++. -....++ T Consensus 342 kI~vir~~D~i~~di~~~~~~~yiGKv~N~~dgr~~l~~~i~~yl~~L~~~g~I~~f~~~Dv~v~~~------~~~~~v~ 415 (436) T protein:vir:78 342 SNQSVRVLDQIANDIATLFNTKYLGEVPNDKSGRISFWNDVVKHHEQLQNMRAIEDFKADDVSVEPG------SDKKTVV 415 (436) T ss_pred hhhHHHHHHHHHHHHHHHhhhccccccCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEeec------CCCCEEE Confidence 99999999999999998875 59995 69999999999999999999999999998863 33221 1355688 Q ss_pred EEEEEEecCcceEEEEEEEEe Q lcl|Aclame:pro 625 ATFYLQPARSINYITLNFVAT 645 (660) Q Consensus 625 ~~i~~~p~~p~e~i~~~~~~~ 645 (660) +.+.+.|+..||+|.+++... T Consensus 416 v~~~v~pvdamekiy~ti~v~ 436 (436) T protein:vir:78 416 VSDAVKVISAMSKLYMTVSVS 436 (436) T ss_pred EEEEEEEEEeeeeEEEEEEEC Confidence 999999999999999998886 No 49 >protein:vir:102359 Length: 356 # NCBI annotation: XkdK protein # Family: family:all:632 # MgeID: mge:1566 # MgeName: phi CD119 # Cross-refs: genbank:acc:YP_529565;genbank:gi:90592650;genbank:GeneID:3974491 Probab=99.26 E-value=2.7e-12 Score=84.02 Aligned_cols=325 Identities=13% Similarity=0.081 Sum_probs=160.4 Q ss_pred ccccceeeeeccccCcccceeecccCCcccceeEEeeccccccccccccchhhhhhcC---CceEEEEEecCCCccccee Q lcl|Aclame:pro 261 RYSTAKAIFGYGPQTDDQYAIIVRRNDSVVQSVVLSTKRGERDIYGSNIFIDDFFAKG---ASNYIFATAQGWPKGFSGV 337 (660) Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~e~~~v~~~~~~~~~~~~~~~~~~~~~~g---~~~~~~~~~~~~~~~~~~~ 337 (660) -.+.+..-... .+.+......+.-. -..+-...+.. ............... ...++.....+........ T Consensus 1 ~~glp~i~i~f-----~~~a~ta~~~g~rG-iv~~il~d~~~-~~~~~~~~~~v~~~~~~~n~~~i~~~~~g~~~~~~~~ 73 (356) T protein:vir:10 1 MAGLVNINIEF-----KELATSFIQRSKAG-IVAIILKDTTK-MYKELTSEDDIPISLSADNKKYIKYGFVGATDNEKVL 73 (356) T ss_pred CCCCCceeEEE-----eecceeeccCCccc-eEEEEEecCCc-ceeEEeccccchhHHHHHHHHHHHHHhhccccccccc Confidence 00111000000 00011111111000 00111111110 000000000000000 0000000000000000000 Q ss_pred eeeeccccccccccchhhhhhhhhhhhhhhcCcceeecccccCCchhhHHHHHHHHHHHHhhccCeEEEeccccceEEec Q lcl|Aclame:pro 338 IKLNGGLSSNETVEAGDLMEAWDLFADRESVNAQLFIAGSCAGESLEVASTVQKHVVAIGDSRQDCLVLCSPPRAAVVGI 417 (660) Q Consensus 338 ~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 417 (660) .+..++... ..+..++..++ ...|.+..+.+.++.. ..+++..+.+++.++++.-. .....+-. T Consensus 74 ~p~~~~~~~--~~t~~~y~~aL---~~le~~~fn~l~~~~~-------d~~~~~~~~a~ikr~r~~~~----~~~~~V~~ 137 (356) T protein:vir:10 74 RPSKVIIST--FTEDGKVEDIL---EELESVEFNYLCMPEA-------IEAEKTKIVTWIKKIREEES----TEAKAVLA 137 (356) T ss_pred cceeeeeec--ccCchhHHHHH---HHhcCccceEEEecCC-------ChHHHHHHHHHHHHHHhcCC----cEEEEEec Confidence 000000000 11233444444 4445544444433321 12456666777766664210 00111111 Q ss_pred CCCCcHHHHHHHhhhcccccccccccCcceEEEEechhccccccccccee--echHHHHHHHHHHhhccCCceeccccee Q lcl|Aclame:pro 418 PVNRAVDNLVDWRTASGTYTDNNFNISSTYAAIDGNYKYQYDKYNDVNRW--VPLAADIAGLCARTDNISQPWMSPAGYN 495 (660) Q Consensus 418 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~p~~~~~d~~~~~~~~--~p~s~~~AG~~a~~d~~~g~~~span~~ 495 (660) ......+.++.+ ... .++. +. .+ .-.++.+||++|..... +|+.|+. T Consensus 138 ~~~aD~EgIInv--------------~n~--~~~~----------g~-~~t~~~~~~~vAG~~Ag~~~n----~S~T~~~ 186 (356) T protein:vir:10 138 NIKADNEAIINF--------------TEN--VVVD----------GE-EITAEKYTTRVASLIASTPNT----QSITYAP 186 (356) T ss_pred CCCCCCceeEEe--------------ecC--eEec----------ce-eechhHHHHHHHHHHhccchh----cccccee Confidence 111111111111 110 1111 11 11 12367899999988644 4888887 Q ss_pred eceeeecccccccCChhhhhhhccccceEEEEecCCeEEE-ecceec----CCCCcccceehhhHHHHHHHHHHHHHHH- Q lcl|Aclame:pro 496 RGQILNVIKLAIETRQAQRDRLYQEAINPVTGTGGDGYVL-YGDKTA----TSVPSPFDRINVRRLFNMVKTNIGSASK- 569 (660) Q Consensus 496 ~~~v~~~~~~~~~~~~~e~~~Ln~~gin~i~~~~g~G~~~-wG~rT~----~~~~~~~~~i~vrR~~~~i~~~~~~~~~- 569 (660) +..+. ....++++|.+.+-++|--++.+. ++.+++ -|=.|+ ...+.+|+.|.+.|++|.|.+.+++... T Consensus 187 ~~~~~----~~~~~t~~e~~~ai~~G~lvl~~d-~~~V~I~~~VNSltt~t~~k~~~f~Kirvvr~~D~i~~Di~~~f~~ 261 (356) T protein:vir:10 187 LDEVE----SIVKIDKASADAKVQAGELILRRL-SGKIRIARGINSLTTLTAEKGEIFQKIKLVDTKDLISKDIKNIYVE 261 (356) T ss_pred cCCcc----ccccCCHHHHHHHHhCCeEEEEEE-cCeEEEEecCccceecCCCCCcchhhhHHHHHHHHHHHHHHHHHhh Confidence 76432 224588999999999999998765 444544 344444 2345679999999999999999999886 Q ss_pred HHhhc-CCCHHHHHHHHHHHHHHHHHHHhcCCee-eEEEEEecCCC--------------CHHHhh----CCEEEEEEEE Q lcl|Aclame:pro 570 YRLFE-LNNAFTRSSFRTETSQYLQGIKALGGVY-NFKVVCDTTNN--------------TPAVID----RNEFVATFYL 629 (660) Q Consensus 570 ~~v~e-pn~~~~~~~i~~~i~~~l~~l~~~gal~-g~~v~~d~~~n--------------t~~~i~----~G~~~~~i~~ 629 (660) .|+++ ||+..-|..++..++.||.+|.+.|+|. +|.+..|.+.. +...+. .-.+++.+.+ T Consensus 262 ~yiGKv~N~~dgr~~l~~ai~~y~~~L~~~~~I~~~~~~eid~e~q~~~~~~~g~d~~~~~d~~v~~~~~~~~v~~~~~v 341 (356) T protein:vir:10 262 KYLRKCPNTYDNKCLFIVAVQSYLTELAKQELIDSNFTVEIDLEKQKEYLEGKKIAVSKMKENEIKEANTGSNGFYLINL 341 (356) T ss_pred ccccccCCCHHHHHHHHHHHHHHHHHHHhCCccccCceeEecccchHHHhhhccccccccccceeecccCCcEEEEEEEE Confidence 69998 5999999999999999999999999996 57777765431 111221 2347899999 Q ss_pred EecCcceEEEEEEEE Q lcl|Aclame:pro 630 QPARSINYITLNFVA 644 (660) Q Consensus 630 ~p~~p~e~i~~~~~~ 644 (660) .|+-.||.|.+++.. T Consensus 342 ~~vdamE~iy~ti~v 356 (356) T protein:vir:10 342 KLVDAMEDINIRVQM 356 (356) T ss_pred EEEeeeeeEEeEEeC Confidence 999999999999888 No 50 >protein:vir:489 Length: 498 # NCBI annotation: putative sheath protein # Family: family:all:369 # MgeID: mge:11 # MgeName: P27 # Cross-refs: genbank:acc:NP_543096;swissprot:trembl:q8w623;genbank:gi:18249908;uniprot:Q8W623;genbank:GeneID:929698 Probab=99.14 E-value=6.1e-10 Score=71.12 Aligned_cols=451 Identities=12% Similarity=0.039 Sum_probs=210.7 Q ss_pred CccccCceEEEEecCCcccccCCcCceeEEeeccc---CCCCccEEecCHHHHHHHcCCcCCcchhHHHHHHHHHhc-CC Q lcl|Aclame:pro 1 MALLSPGVELKETTVQSTVVNNSTGTAALAGKFQW---GPAFQIKQITDEVALVDMFGTPNTDTADYFMSAMNFLQY-GN 76 (660) Q Consensus 1 ~~~~~PGVyveE~~~~~~i~gv~Ts~~afvG~~~~---Gpv~~p~~i~s~~e~~~~fG~~~~~~~~~~~v~~~f~ng-G~ 76 (660) =.+..||+|+| ++-+....+..+.-.-+||..-- .|.++|++|+|..|-...||. .+.+..+++.|..+. =. T Consensus 10 ~~iRvP~~y~E-~dns~A~~~~~~qrvLiiGq~la~gt~~~~~~v~v~s~~~a~~~fG~---GS~l~~M~~a~~~~n~~~ 85 (498) T protein:vir:48 10 SDTLVPLFYAE-MDNSAANTAVTSAPALLIGHASNDAAIEVNSLVLMPSADYARQICGA---GSQLARMVDVYRQTDPFG 85 (498) T ss_pred cccccceEEEE-EecCCCccccCCcceEEEeecCccccccccceEEecCHHHHHHhcCc---ccHHHHHHHHHHHhCCCc Confidence 44668999998 44344444444556778887764 377999999999999999993 345566677777644 45 Q ss_pred EEEEEEccCccccccccccccccccccccccccccccceeEEeccccccccccceeeeecCCceeeEEeecccccccccc Q lcl|Aclame:pro 77 DLRVVRAVDRDTAKNSSPVAGNINFTISSAGTNYRVGDKVVVKYSTDIIEPDGEVTSVDSDGKILNIFIPSGKIIAKAKE 156 (660) Q Consensus 77 ~~~vvRv~~~~~~~~a~~~~~~l~~t~~~~g~~~~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~a~~ 156 (660) ++|++-+.|....+ ..+.+.++-.+... -.+.+.+. +.........++ .+.. T Consensus 86 ~l~~i~~~D~ag~a----A~g~it~tg~at~~-----G~l~l~Ig----------------g~~v~v~V~~gd---Taa~ 137 (498) T protein:vir:48 86 ELYVIAVPEARGAA----ATVRVTVTGEAEES-----GTLSLYVG----------------RSSVQVPVVNGD---DATA 137 (498) T ss_pred eeEEEeeCCcccce----eEEEEEecccccCC-----ceEEEEEC----------------CEEEEEeecCCC---CHHH Confidence 79999987632211 11222222111110 01111111 000000000000 0000 Q ss_pred cccccccccceeeeeeccccccceeeeecccccccccccccccccccccccceeeecccccccccccccccccccccccc Q lcl|Aclame:pro 157 IGEYPELGSNWTAEMSGSSSGLSAVITIDSVVMDSGILLTEVETSEEAITSLTFQESIKKYGVPGVVALYPGELGDQLEI 236 (660) Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~g~~g~~i~v 236 (660) +... +.+.+ .... .++.+... . .......+...|..||.+.+ T Consensus 138 vA~a-----------------l~aai-----~a~~--~lPVTA~~-------------~-~~~VtlTAr~kG~~GN~I~l 179 (498) T protein:vir:48 138 VATA-----------------IKEAV-----NGVI--TLPFAASS-------------D-AGVVTLTARHKGLYGNELPV 179 (498) T ss_pred HHHH-----------------HHHHH-----hCCC--CcceEEEe-------------c-CcEEEEEeeeccccccccee Confidence 0000 00000 0000 00000000 0 01112234444444444433 Q ss_pred cccccccccccceeeeeeccccccccccceeeeeccccCcccceeecccCCcccceeEEeeccccccccccccchhhhhh Q lcl|Aclame:pro 237 EIVSKADYDKGASAQLKIYPDGGTRYSTAKAIFGYGPQTDDQYAIIVRRNDSVVQSVVLSTKRGERDIYGSNIFIDDFFA 316 (660) Q Consensus 237 ~i~s~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~e~~~v~~~~~~~~~~~~~~~~~~~~~ 316 (660) .+.-...... +.. . T Consensus 180 ~~~~~~~~~g----------------------------------------e~~--------------------------p 193 (498) T protein:vir:48 180 CLNYYGSGGG----------------------------------------EIL--------------------------P 193 (498) T ss_pred eeeeccCccc----------------------------------------ccc--------------------------c Confidence 2210000000 000 0 Q ss_pred cCCceEEEEEecCCCcccceeeeeeccccccccccchhhhhhhhhhhhhhhcCcceeecccccCCchhhHHHHHHHHHHH Q lcl|Aclame:pro 317 KGASNYIFATAQGWPKGFSGVIKLNGGLSSNETVEAGDLMEAWDLFADRESVNAQLFIAGSCAGESLEVASTVQKHVVAI 396 (660) Q Consensus 317 ~g~~~~~~~~~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 396 (660) .| +.. .....+||.-. .|+..+++.+ ....-.+++++.... ... .++.+| T Consensus 194 ~G----lt~----------~itamsgGag~------PDia~aLaal---~~~~~~~I~~p~~D~---asl----~al~~~ 243 (498) T protein:vir:48 194 AG----LQV----------VTEAGTAGSGA------PDLTAAVAAM---GDEAFDFIGLPFNDA---ASI----NMMMTE 243 (498) T ss_pred ce----eeE----------EEEcccCCccC------cchHHHHHhh---ccCCccEEEEeecCH---HHH----HHHHHH Confidence 00 000 00112222211 1222222222 211222344433221 122 333334 Q ss_pred HhhccCeEEEeccccceEEecCCCCcHHHHHHHhhhcccccccccccCcceEEEEechhcccccccccceeech---HHH Q lcl|Aclame:pro 397 GDSRQDCLVLCSPPRAAVVGIPVNRAVDNLVDWRTASGTYTDNNFNISSTYAAIDGNYKYQYDKYNDVNRWVPL---AAD 473 (660) Q Consensus 397 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~p~~~~~d~~~~~~~~~p~---s~~ 473 (660) ++....|...+. .+..+.-....-|..++.+|-.. .++.|..+.+..- ....|+ ++. T Consensus 244 L~~~sgRw~~~~-q~~g~~~~a~~gT~~~l~t~g~~----------~N~~~it~~~~~~---------~~~~p~~~~AAa 303 (498) T protein:vir:48 244 MNDSSGRWSYAR-QLYGHVYTAKLGTLSELVNAGDM----------HNQQHITLAGYEK---------ETQSPVDELVAS 303 (498) T ss_pred HhhhhhhhhHHh-hcCeEEEEeccCCHHHHHHhhhc----------cCCceEEEEecCC---------CCCChHHHHHHH Confidence 332111111111 11122222334467777777554 5677776554211 011133 234 Q ss_pred HHHHHH---HhhccCCceecccc-eeeceeeecccccccCChhhhhhhccccceEEEEecCCeEEEecceec------CC Q lcl|Aclame:pro 474 IAGLCA---RTDNISQPWMSPAG-YNRGQILNVIKLAIETRQAQRDRLYQEAINPVTGTGGDGYVLYGDKTA------TS 543 (660) Q Consensus 474 ~AG~~a---~~d~~~g~~~span-~~~~~v~~~~~~~~~~~~~e~~~Ln~~gin~i~~~~g~G~~~wG~rT~------~~ 543 (660) +|++.| +.|..| |-| ..|.|+..+ .....++..|+|.|.-+||.++.- .++-..+-=..|. .. T Consensus 304 ~a~~aA~~l~~DPAr-----PLqtl~L~Gi~~p-~~~~r~~~~ern~LL~~Gist~~V-~~G~V~I~R~ITTY~~n~~G~ 376 (498) T protein:vir:48 304 RLAREAVFIRNDPAR-----PTQTGELVGMLPA-PKGKRFIMTEQQTLLSHGVATAYV-EGGTLRIQRSVTTYKKNAYGV 376 (498) T ss_pred HHHHHHHhhhccccc-----cccceeeeccccC-CchhcCChHHHHHHHhcCcceEEE-cCCeEEEEeeeeeeeecCCCC Confidence 444444 556555 333 455555533 445667899999999999999976 5555666555554 12 Q ss_pred CCcccceehhhHHHHHHHHHHHHHHHH-HhhcCCCHH-----------HHHHHHHHHHHHHHHHHhcCCeeeE---E--E Q lcl|Aclame:pro 544 VPSPFDRINVRRLFNMVKTNIGSASKY-RLFELNNAF-----------TRSSFRTETSQYLQGIKALGGVYNF---K--V 606 (660) Q Consensus 544 ~~~~~~~i~vrR~~~~i~~~~~~~~~~-~v~epn~~~-----------~~~~i~~~i~~~l~~l~~~gal~g~---~--v 606 (660) .|..|..|+..|+.+|+.+.++..... |--+.+-.. +-..||..+-.-+++|..+|.+..+ + + T Consensus 377 ~D~syLDi~T~~tl~yvr~~~r~~i~~kfpR~KLa~dg~~~~~gq~IvTp~~ir~eli~~y~~le~~given~~~~~~~L 456 (498) T protein:vir:48 377 ADNSYLDSETLHTSAYVLRKLKSVITSKYGRHKLANDGTRFGPGQAIVTPAVIKGELLATYRQMERAGIVENYDLFKQYL 456 (498) T ss_pred cchhhhhhhhHHHHHHHHHHHHHHhhhhcCCceecccCcccCCCCcccchHHHHHHHHHHHHhhhhhccccChhhhccee Confidence 234699999999999999999988763 332333222 6778999999999999999988773 2 3 Q ss_pred EEecCCCCHHHhhCCEEEEEEEEEecCcceEE----EEEEEEeecCc Q lcl|Aclame:pro 607 VCDTTNNTPAVIDRNEFVATFYLQPARSINYI----TLNFVATATGA 649 (660) Q Consensus 607 ~~d~~~nt~~~i~~G~~~~~i~~~p~~p~e~i----~~~~~~~~~~~ 649 (660) .+.+.-+. ..|+.+.+-...+-+.+-+ .|+++-....+ T Consensus 457 iVerd~~d-----pnRln~~~p~d~vn~L~V~A~~~~f~lq~~~~~~ 498 (498) T protein:vir:48 457 IVERDADN-----PNRLNTLFPPDYVNQLRVFAVVNQFRLQYSEESA 498 (498) T ss_pred EEEECCCC-----CcEEEEEecccccCchhhhhhhhhhhhhhhhcCC Confidence 33322211 1345555544444444333 33344333333 No 51 >protein:vir:4517 Length: 498 # NCBI annotation: tail sheath protein # Family: family:all:369 # MgeID: mge:97 # MgeName: V # Cross-refs: genbank:acc:NP_599043;genbank:gi:19549001;genbank:GeneID:935236 Probab=99.11 E-value=1.1e-09 Score=69.62 Aligned_cols=451 Identities=14% Similarity=0.063 Sum_probs=209.6 Q ss_pred CccccCceEEEEecCCcccccCCcCceeEEeeccc---CCCCccEEecCHHHHHHHcCCcCCcchhHHHHHHHHHhcC-C Q lcl|Aclame:pro 1 MALLSPGVELKETTVQSTVVNNSTGTAALAGKFQW---GPAFQIKQITDEVALVDMFGTPNTDTADYFMSAMNFLQYG-N 76 (660) Q Consensus 1 ~~~~~PGVyveE~~~~~~i~gv~Ts~~afvG~~~~---Gpv~~p~~i~s~~e~~~~fG~~~~~~~~~~~v~~~f~ngG-~ 76 (660) =....||+|+| ++.+....+...--.-+||..-- .|.++|++|+|..|-...||. .+.+..+++.|..+-- . T Consensus 10 ~~iRvP~~y~E-~dns~A~~~~~~q~vLiiGq~la~gs~~~~~~v~v~s~~~a~~lfG~---GSml~~M~~a~~~~n~~~ 85 (498) T protein:vir:45 10 SNTLVPLFYAE-MDNQAANTAQDSGASLLIGHANNGAEIVANSLVLMPSADYARQICGA---GSQLARMVEAYRQTDPFG 85 (498) T ss_pred cccccCeEEEE-EeCCCCCCCCCCcceEEEEecCCccccccceeEEecCHHHHHHhcCc---CcHHHHHHHHHHHhCCcc Confidence 34568999999 54333333344456778887744 477999999999999999993 3556667777776443 4 Q ss_pred EEEEEEccCccccccccccccccccccccccccccccceeEEeccccccccccceeeeecCCceeeEEeecccccccccc Q lcl|Aclame:pro 77 DLRVVRAVDRDTAKNSSPVAGNINFTISSAGTNYRVGDKVVVKYSTDIIEPDGEVTSVDSDGKILNIFIPSGKIIAKAKE 156 (660) Q Consensus 77 ~~~vvRv~~~~~~~~a~~~~~~l~~t~~~~g~~~~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~a~~ 156 (660) ++|++-+.+....+ ..+.+.++-.+... -.+.+.+. +....+....++. +.. T Consensus 86 ~l~~i~~~d~aG~a----A~g~it~tg~at~~-----G~l~l~Ig----------------g~~v~v~V~~gdT---aa~ 137 (498) T protein:vir:45 86 ELYVIAVPEATGAA----ATVTLTVTGEATES-----GTVNVYVG----------------RTRVQAPVTNGDN---VTT 137 (498) T ss_pred eEEEEeeCCcccce----eEEEEEeecccCCC-----cEEEEEEC----------------CEEEEEEecCCCC---HHH Confidence 89999987532211 11222222111110 01111111 1011100000000 000 Q ss_pred cccccccccceeeeeeccccccceeeeecccccccccccccccccccccccceeeecccccccccccccccccccccccc Q lcl|Aclame:pro 157 IGEYPELGSNWTAEMSGSSSGLSAVITIDSVVMDSGILLTEVETSEEAITSLTFQESIKKYGVPGVVALYPGELGDQLEI 236 (660) Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~g~~g~~i~v 236 (660) +.. .+.+.+ .... .++.+.. . ........+...|..||.+.+ T Consensus 138 vA~-----------------al~aai-----na~~--~lPVTA~-------------~-~~~~VtlTAr~kG~~GN~I~l 179 (498) T protein:vir:45 138 IAS-----------------SIQDAI-----NAVP--TLPFTAS-------------S-SAGVVTLTARHKGLCGNEIPV 179 (498) T ss_pred HHH-----------------HHHHHH-----hCCC--CCceEEE-------------e-cCceEEEEeeccCccccceeE Confidence 000 000000 0000 0000000 0 001122334444555554433 Q ss_pred cccccccccccceeeeeeccccccccccceeeeeccccCcccceeecccCCcccceeEEeeccccccccccccchhhhhh Q lcl|Aclame:pro 237 EIVSKADYDKGASAQLKIYPDGGTRYSTAKAIFGYGPQTDDQYAIIVRRNDSVVQSVVLSTKRGERDIYGSNIFIDDFFA 316 (660) Q Consensus 237 ~i~s~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~e~~~v~~~~~~~~~~~~~~~~~~~~~ 316 (660) .+.-..... +. ... T Consensus 180 ~~~~~~~~~-----------------------------------------ge-------------------------~~p 193 (498) T protein:vir:45 180 SLNYYGFGG-----------------------------------------GE-------------------------VLP 193 (498) T ss_pred EEeeccccc-----------------------------------------cc-------------------------ccc Confidence 321100000 00 000 Q ss_pred cCCceEEEEEecCCCcccceeeeeeccccccccccchhhhhhhhhhhhhhhcCcceeecccccCCchhhHHHHHHHHHHH Q lcl|Aclame:pro 317 KGASNYIFATAQGWPKGFSGVIKLNGGLSSNETVEAGDLMEAWDLFADRESVNAQLFIAGSCAGESLEVASTVQKHVVAI 396 (660) Q Consensus 317 ~g~~~~~~~~~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 396 (660) .| +.+ .....+||.-. .|+..+++.+.. ..-++++++.... ....++..+|.+. T Consensus 194 ~G----lt~----------~itamagGag~------PD~a~alaal~~---~~~~~I~~p~~D~---asL~al~~~L~~~ 247 (498) T protein:vir:45 194 AG----VQI----------AVATGTAGTGA------PVLTGAVAAMAD---EPFDYIGLPFNDT---ASVNTLVTEMNDT 247 (498) T ss_pred ce----eeE----------EEEccCCCccC------chhHHHHHHhcc---CCccEEEEeeCCH---HHHHHHHHHHhhh Confidence 00 000 00111222211 122333332221 1222333333221 2223333333321 Q ss_pred HhhccCeEEEeccccceEEecCCCCcHHHHHHHhhhcccccccccccCcceEEEEechhcccccccccceeech---HHH Q lcl|Aclame:pro 397 GDSRQDCLVLCSPPRAAVVGIPVNRAVDNLVDWRTASGTYTDNNFNISSTYAAIDGNYKYQYDKYNDVNRWVPL---AAD 473 (660) Q Consensus 397 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~p~~~~~d~~~~~~~~~p~---s~~ 473 (660) .. |...+. .+..+.-....-|..++.+|-.. .++.|..+.|...- ..-|| ++. T Consensus 248 sg----Rw~~~~-q~~g~~~~a~~gT~~~l~t~g~~----------~N~~~it~~~~~~~---------~~sp~~~~AAa 303 (498) T protein:vir:45 248 SG----RWSYAR-QLYGHVYTAKTGTLSELVNAGDQ----------FNQQHITLAGYEKE---------TQTPADELAAS 303 (498) T ss_pred hh----hhhHHh-hcCeEEEEeccCCHHHHHHhhhc----------cCCceEEEEecCCC---------CCChHHHHHHH Confidence 11 111111 11122222334467777777554 56777765542111 01133 344 Q ss_pred HHHHHH---HhhccCCceecccc-eeeceeeecccccccCChhhhhhhccccceEEEEecCCeEEEecceec------CC Q lcl|Aclame:pro 474 IAGLCA---RTDNISQPWMSPAG-YNRGQILNVIKLAIETRQAQRDRLYQEAINPVTGTGGDGYVLYGDKTA------TS 543 (660) Q Consensus 474 ~AG~~a---~~d~~~g~~~span-~~~~~v~~~~~~~~~~~~~e~~~Ln~~gin~i~~~~g~G~~~wG~rT~------~~ 543 (660) +|++.| +.|..| |-| ..|.|+..+ .....++..|+|.|.-+||.++.--.| -..+-=..|. .. T Consensus 304 ~aa~~A~~l~~DPAr-----PL~tl~L~Gi~~p-~~~~r~~~~ern~LL~~Gist~~V~~G-~V~I~R~ITTY~~n~~G~ 376 (498) T protein:vir:45 304 RTARAAVFIRNDPAR-----PTQTGELVGMLPA-PKGKRFTMTEQQTLLSHGVATAYVESG-VLRIQRDVTTYRKNAYGV 376 (498) T ss_pred HHHHHHHHhhccccc-----ccCceeecceecC-CchhcCChHHHHHHHhCCcceEEEcCC-eEEEEeeeeeeeecCCCC Confidence 444554 556555 433 455666543 445667899999999999999976444 2455444443 12 Q ss_pred CCcccceehhhHHHHHHHHHHHHHHHH-HhhcCCCHH-----------HHHHHHHHHHHHHHHHHhcCCeeeE---E--E Q lcl|Aclame:pro 544 VPSPFDRINVRRLFNMVKTNIGSASKY-RLFELNNAF-----------TRSSFRTETSQYLQGIKALGGVYNF---K--V 606 (660) Q Consensus 544 ~~~~~~~i~vrR~~~~i~~~~~~~~~~-~v~epn~~~-----------~~~~i~~~i~~~l~~l~~~gal~g~---~--v 606 (660) .|..|..|+..|+.+|+.+.++..... |--+.+-.. +-..||..+-.-+++|..+|.+..+ + + T Consensus 377 ~D~syLDi~T~~tl~yvr~~~r~~i~~kfpR~KLa~dg~~~~~gq~IvTp~~ir~ell~~y~~le~~givEn~~~~~~~L 456 (498) T protein:vir:45 377 ADNSYLDSETLHTSAYVLRKLKSVITSKYGRHKLASDGTRFGPGQAIVTPAVIKGELLATYRQLERAGIVENYELFKQYL 456 (498) T ss_pred cchhhhhhhhHHHHHHHHHHHHHHhhhhcCCeeecccCcccCCCCcccchHHHHHHHHHHHHhhhhhccccChhhhccee Confidence 234699999999999999999988764 322332222 6678999999999999999988773 2 2 Q ss_pred EEecCCCCHHHhhCCEEEEEEEEEecCcceEE----EEEEEEeecCc Q lcl|Aclame:pro 607 VCDTTNNTPAVIDRNEFVATFYLQPARSINYI----TLNFVATATGA 649 (660) Q Consensus 607 ~~d~~~nt~~~i~~G~~~~~i~~~p~~p~e~i----~~~~~~~~~~~ 649 (660) .+.+.-+. ..|+.+.+-...+-+.+-+ .|+++-....+ T Consensus 457 iVerd~~d-----pnRln~~~p~d~vn~L~V~A~~~~f~lq~~~~~~ 498 (498) T protein:vir:45 457 VVERDASV-----PNRLNTLFPPDYVNQLRVFAVVNQFRLQYSEESA 498 (498) T ss_pred EEEECCCC-----CcEEEEEecccccCchhhhhhhhhhheehhhcCC Confidence 33322111 1345555544444444333 34444443333 No 52 >protein:vir:4463 Length: 498 # NCBI annotation: Tail Sheath protein # Family: family:all:369 # MgeID: mge:96 # MgeName: ST64B # Cross-refs: genbank:acc:NP_700386;genbank:gi:23505458;genbank:GeneID:955665 Probab=99.04 E-value=3e-09 Score=67.33 Aligned_cols=451 Identities=14% Similarity=0.066 Sum_probs=206.5 Q ss_pred CccccCceEEEEecCCcccccCCcCceeEEeeccc---CCCCccEEecCHHHHHHHcCCcCCcchhHHHHHHHHHhcC-C Q lcl|Aclame:pro 1 MALLSPGVELKETTVQSTVVNNSTGTAALAGKFQW---GPAFQIKQITDEVALVDMFGTPNTDTADYFMSAMNFLQYG-N 76 (660) Q Consensus 1 ~~~~~PGVyveE~~~~~~i~gv~Ts~~afvG~~~~---Gpv~~p~~i~s~~e~~~~fG~~~~~~~~~~~v~~~f~ngG-~ 76 (660) =....||+|+| ++.+..-.....--.-+||..-- .|.++|++|+|..|-...||. .+.+..+++.|..+-- . T Consensus 10 ~~iRvP~~y~E-~dns~A~~~~~~q~vLiiGq~la~gs~~~~~~v~v~s~~~a~~~fG~---GSml~~M~~a~~~~n~~~ 85 (498) T protein:vir:44 10 SDTRVPLFYAE-MDNSAANTARDSGASLLIGHASNDASIAVNSLVLVSSVDYARQICGA---GSQLARMVGAYRKTDPFG 85 (498) T ss_pred cccccCeEEEE-EeCCCCCCCcCCcceEEEEecCcccccccceeEeecCHHHHHHhcCc---ccHHHHHHHHHHHhCCCc Confidence 34568999999 43322222222344667887664 377999999999999999993 4556667777777544 4 Q ss_pred EEEEEEccCccccccccccccccccccccccccccccceeEEeccccccccccceeeeecCCceeeEEeecccccccccc Q lcl|Aclame:pro 77 DLRVVRAVDRDTAKNSSPVAGNINFTISSAGTNYRVGDKVVVKYSTDIIEPDGEVTSVDSDGKILNIFIPSGKIIAKAKE 156 (660) Q Consensus 77 ~~~vvRv~~~~~~~~a~~~~~~l~~t~~~~g~~~~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~a~~ 156 (660) ++|++=+.|.... ++ .+.+.++-.+...+ .+.+.+. +....+....++. +.. T Consensus 86 ~l~~i~~~D~aG~-aA---tg~it~tg~at~~G-----~l~l~Ig----------------g~~v~v~V~~gdT---aa~ 137 (498) T protein:vir:44 86 ELYVIAVPESTGA-AA---TVALTVTGEATETG-----TVNVYTG----------------RTRVQAPVTSGDD---AAA 137 (498) T ss_pred eeEEEecCCcccc-ee---EEEEEeecccCCCc-----EEEEEEC----------------CEEEEEEecCCCC---HHH Confidence 7999988653221 11 12222221111110 1111111 1011100000000 000 Q ss_pred cccccccccceeeeeeccccccceeeeecccccccccccccccccccccccceeeecccccccccccccccccccccccc Q lcl|Aclame:pro 157 IGEYPELGSNWTAEMSGSSSGLSAVITIDSVVMDSGILLTEVETSEEAITSLTFQESIKKYGVPGVVALYPGELGDQLEI 236 (660) Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~g~~g~~i~v 236 (660) +... +.+.+ ...+ .++.+.... .......+...|..||.+.+ T Consensus 138 vA~a-----------------l~aai-----na~~--~lPVTA~~~--------------~~~vtlTAr~kG~~GN~I~l 179 (498) T protein:vir:44 138 VAVS-----------------IKDAV-----NANP--DLPFTATSE--------------AGVVTLTARHKGLYGNEIPV 179 (498) T ss_pred HHHH-----------------HHHHH-----hCCC--CCceEEeec--------------cceEEEEEeccCcccCcceE Confidence 0000 00000 0000 000000000 01112334444555554433 Q ss_pred cccccccccccceeeeeeccccccccccceeeeeccccCcccceeecccCCcccceeEEeeccccccccccccchhhhhh Q lcl|Aclame:pro 237 EIVSKADYDKGASAQLKIYPDGGTRYSTAKAIFGYGPQTDDQYAIIVRRNDSVVQSVVLSTKRGERDIYGSNIFIDDFFA 316 (660) Q Consensus 237 ~i~s~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~e~~~v~~~~~~~~~~~~~~~~~~~~~ 316 (660) .+.-.... .+. ... T Consensus 180 ~~~~~~~~-----------------------------------------~ge-------------------------~~p 193 (498) T protein:vir:44 180 TLNYYGFG-----------------------------------------GGE-------------------------VLP 193 (498) T ss_pred EEeeccCc-----------------------------------------ccc-------------------------ccc Confidence 22100000 000 000 Q ss_pred cCCceEEEEEecCCCcccceeeeeeccccccccccchhhhhhhhhhhhhhhcCcceeecccccCCchhhHHHHHHHHHHH Q lcl|Aclame:pro 317 KGASNYIFATAQGWPKGFSGVIKLNGGLSSNETVEAGDLMEAWDLFADRESVNAQLFIAGSCAGESLEVASTVQKHVVAI 396 (660) Q Consensus 317 ~g~~~~~~~~~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 396 (660) .| +.+ .....+||.. ..|+..+++.+.. ..-++++++.... ... .++.+| T Consensus 194 ~G----lt~----------titamsgGag------~PDia~alaal~~---~~~~~i~~p~~D~---asl----~al~~~ 243 (498) T protein:vir:44 194 AG----VNI----------TVASGVKGAG------APALNDAVAAMGD---EPFDYIGLPFNDT---ASV----NSMATE 243 (498) T ss_pred cc----eeE----------EEEcccCCcc------CchhHHHHHhhcc---CCccEEEEeecCH---HHH----HHHHHH Confidence 00 000 0011122211 1223333332221 1222344433221 122 233333 Q ss_pred HhhccCeEEEeccccceEEecCCCCcHHHHHHHhhhcccccccccccCcceEEEEechhcccccccccceeech---HHH Q lcl|Aclame:pro 397 GDSRQDCLVLCSPPRAAVVGIPVNRAVDNLVDWRTASGTYTDNNFNISSTYAAIDGNYKYQYDKYNDVNRWVPL---AAD 473 (660) Q Consensus 397 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~p~~~~~d~~~~~~~~~p~---s~~ 473 (660) ++....|..-+. .+..+.-....-|..++.+|-.. .++.|..+.|...-. .-|+ ++. T Consensus 244 L~~~sgRw~~~~-q~~g~~~~a~~gT~a~l~t~g~~----------~N~~~it~~~~~~~~---------~sp~~~~AAa 303 (498) T protein:vir:44 244 MNDSSGRWSYVR-QLYGHVYTAKTGTLSELVAAGDQ----------FNLQHITLAGYEKDT---------QTPADELAAS 303 (498) T ss_pred HhhhhcchHHHh-hcCeEEEEeccCCHHHHHHhhhc----------cCCceEEEEecCCCC---------CCHHHHHHHH Confidence 322111111111 11122222334567777777554 566776654421110 0122 234 Q ss_pred HHHHHH---HhhccCCceecccc-eeeceeeecccccccCChhhhhhhccccceEEEEecCCeEEEecceec------CC Q lcl|Aclame:pro 474 IAGLCA---RTDNISQPWMSPAG-YNRGQILNVIKLAIETRQAQRDRLYQEAINPVTGTGGDGYVLYGDKTA------TS 543 (660) Q Consensus 474 ~AG~~a---~~d~~~g~~~span-~~~~~v~~~~~~~~~~~~~e~~~Ln~~gin~i~~~~g~G~~~wG~rT~------~~ 543 (660) +|++.| +.|..| |-| ..|.|+..+ .....++..|+|.|..+||.++.--.| -..+-=..|. .. T Consensus 304 ~a~~aA~~l~~DPAr-----PL~tl~L~Gi~~p-~~~~r~~~~ern~LL~~Gist~~V~~G-~V~I~R~ITTY~~n~~G~ 376 (498) T protein:vir:44 304 RTARAAVFIRNDPAR-----PTQTGELVDMLPA-PKGKRFTTTEQQTLLSHGVATAYVESG-VLRIQRDITTYRKNAYGV 376 (498) T ss_pred HHHHHHHHhhccccc-----ccCceeecccccC-CchhcCChHHHHHHHhcCcceEEEcCC-eEEEEeeeeeeeecCCCC Confidence 445544 456555 433 455555433 445667899999999999999976444 2455444443 12 Q ss_pred CCcccceehhhHHHHHHHHHHHHHHHH-HhhcCCCH-----------HHHHHHHHHHHHHHHHHHhcCCeeeE---E--E Q lcl|Aclame:pro 544 VPSPFDRINVRRLFNMVKTNIGSASKY-RLFELNNA-----------FTRSSFRTETSQYLQGIKALGGVYNF---K--V 606 (660) Q Consensus 544 ~~~~~~~i~vrR~~~~i~~~~~~~~~~-~v~epn~~-----------~~~~~i~~~i~~~l~~l~~~gal~g~---~--v 606 (660) .|..|..|+..|+.+|+.+.++..... |--+..-+ -+-..||..+-.-+++|..+|.+..+ + + T Consensus 377 ~D~syLDi~T~~tl~yvr~~~r~~i~~kfpR~KLa~d~~~~~~gq~IvTp~~ir~eli~~y~~le~~givEn~~~~~~~L 456 (498) T protein:vir:44 377 ADNSYLDSETLHTSAYVLRRLKSVITSKYGRHKLANDGTRFGSGQAIVTPAVIRGELGSTYRQMEREGIVENFDLFQQHL 456 (498) T ss_pred cchhhhhhhhHHHHHHHHHHHHHHhhhhcCCcccccCCcccCCCcccccHHHHHHHHHHHHHhhhhhccccChhhhccee Confidence 234699999999999999999988753 32233211 26778999999999999999988773 2 3 Q ss_pred EEecCCCCHHHhhCCEEEEEEEEEecCcceEE----EEEEEEeecCc Q lcl|Aclame:pro 607 VCDTTNNTPAVIDRNEFVATFYLQPARSINYI----TLNFVATATGA 649 (660) Q Consensus 607 ~~d~~~nt~~~i~~G~~~~~i~~~p~~p~e~i----~~~~~~~~~~~ 649 (660) .+.+.-+ +..|+.+.+-...+-+.+-+ .|+++-....+ T Consensus 457 iVerd~~-----dpnRln~~~p~d~vn~L~V~A~~~~f~lq~~~~~~ 498 (498) T protein:vir:44 457 IVERNAN-----DSNRLDVLFPPDYVNQLRVFAVLNQFRLQYSEEAA 498 (498) T ss_pred EEEECCC-----CCcEEEEEecccccCchhhhhhhhhhhhhhhhhcC Confidence 3332211 12355555544444444433 33333332222 No 53 >protein:vir:3751 Length: 376 # NCBI annotation: orf23 # Family: family:all:669 # MgeID: mge:79 # MgeName: HP1 # Cross-refs: genbank:acc:NP_043492;genbank:gi:9628627;genbank:GeneID:1261129 Probab=98.90 E-value=1e-08 Score=64.37 Aligned_cols=357 Identities=11% Similarity=0.021 Sum_probs=180.0 Q ss_pred cccccccccccccccccccceeeeeeccccccccccceeeeeccccCcc-cceeecccCCcccceeEEeecccccccccc Q lcl|Aclame:pro 229 ELGDQLEIEIVSKADYDKGASAQLKIYPDGGTRYSTAKAIFGYGPQTDD-QYAIIVRRNDSVVQSVVLSTKRGERDIYGS 307 (660) Q Consensus 229 ~~g~~i~v~i~s~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~g~~~e~~~v~~~~~~~~~~~~ 307 (660) .|+.- .+...-. ..+..........-.+..... ...+.+.... .+...-+.++... T Consensus 1 ~~~~v---~vn~ln~-------------~qg~~~~ver~~lfig~~~~~~~~~~~~~~~s------dld~~lg~~ds~l- 57 (376) T protein:vir:37 1 MFPSV---QINALNQ-------------LSGETKEIERHALFVGVGTTNQGKLLALTPDS------DFDKVFGETDTDL- 57 (376) T ss_pred CCCeE---EEeeeec-------------cCCCcccccceEEEeeccccccCceEEecCCC------ChHHhhCCCchhH- Confidence 22211 1100000 001111100100000000000 0000111000 0000001111110 Q ss_pred ccchhhhhhcCCceEEEEEecCCCcccceeeeeeccccccccccchhhhhhhhhhhhhhhcCcce-eecccccCCchhhH Q lcl|Aclame:pro 308 NIFIDDFFAKGASNYIFATAQGWPKGFSGVIKLNGGLSSNETVEAGDLMEAWDLFADRESVNAQL-FIAGSCAGESLEVA 386 (660) Q Consensus 308 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 386 (660) -..+.....|+|.++......+.. +..+...+.+.. .+.+...+ .+.++.. .+.... T Consensus 58 k~~v~aa~~naG~~w~a~~~~p~~-------------------~~~~~~~Av~~a--~~~~s~E~V~v~~p~~-t~~a~i 115 (376) T protein:vir:37 58 KKQVRAAMLNAGQNWFAHVYIAQE-------------------DGYDFVECVKKA--NQTASFEYCVNTRYLG-VDKASI 115 (376) T ss_pred HHHHHHHHhCCCCceEEEEEecCC-------------------ChhhHHHHHHHH--HhhCCeeEEEEecCcc-hhHHHH Confidence 012334556776665433222111 112334444433 22333333 3343322 122222 Q ss_pred HHHHHHHHHHHhhc-cCeEEEeccccceEEecCCCCcHHHHHHHhhhcccccccccccCcceEEEEechhcccccccccc Q lcl|Aclame:pro 387 STVQKHVVAIGDSR-QDCLVLCSPPRAAVVGIPVNRAVDNLVDWRTASGTYTDNNFNISSTYAAIDGNYKYQYDKYNDVN 465 (660) Q Consensus 387 ~~v~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~p~~~~~d~~~~~~ 465 (660) .+.+........+. +-.|+++..+... -+...+.+..+-...... ...++.+.+..++..... T Consensus 116 ~a~qa~a~el~~~~~R~vffile~~g~d-~~~~~ge~w~~y~~~l~a------~~~gia~~~V~vV~~~~g--------- 179 (376) T protein:vir:37 116 GKLQECYAELLAKFGRRTFFIQAVQGIN-HDQSDGETWDQYVQKLTT------LQQTIVADHVCLVPLLFG--------- 179 (376) T ss_pred HHHHHHHHHHHHhcCCeEEEEEeccCCC-CcccccCCHHHHHHHHHH------Hhccccccceeeeeeecc--------- Confidence 33333333333332 4566666543210 001122333333222221 122356667766643111 Q ss_pred eeechHHHHHHHHHHhhccCCceecccceeeceeeeccccc-------ccCChhhhhhhccccceEEEEecCC-eEEEec Q lcl|Aclame:pro 466 RWVPLAADIAGLCARTDNISQPWMSPAGYNRGQILNVIKLA-------IETRQAQRDRLYQEAINPVTGTGGD-GYVLYG 537 (660) Q Consensus 466 ~~~p~s~~~AG~~a~~d~~~g~~~span~~~~~v~~~~~~~-------~~~~~~e~~~Ln~~gin~i~~~~g~-G~~~wG 537 (660) ...|.+||++++. ..-++.||.-..-+.+.+.-..+ ..++..-+..|..+|-.+.+.++|. |+.+-+ T Consensus 180 ---n~~G~~aGRl~na--aVsVadspgRV~tGai~gl~~~~~p~d~~g~el~~a~l~aLd~arysvpr~Y~gydG~Yw~d 254 (376) T protein:vir:37 180 ---NETGVLAGRLANR--AVTVADSPARVQTGALVSLGSANKPLDKDGNELTLAHLKSLETARYSVPMWYPDYDGYYRAD 254 (376) T ss_pred ---chHHHHHHHHHhC--CcchhcCccceeecccccccccccccccCCcccchHHHHHHHhCCCeEEEeeCCCCceEEeC Confidence 1358889988763 22357889887655555432221 3356677889999999999999985 787778 Q ss_pred ceecCCCCcccceehhhHHHHHHHHHHHHHHHHHhhcC---CCHHHHHHHHHHHHHHHHHHHhcCCeeeEE----EEEec Q lcl|Aclame:pro 538 DKTATSVPSPFDRINVRRLFNMVKTNIGSASKYRLFEL---NNAFTRSSFRTETSQYLQGIKALGGVYNFK----VVCDT 610 (660) Q Consensus 538 ~rT~~~~~~~~~~i~vrR~~~~i~~~~~~~~~~~v~ep---n~~~~~~~i~~~i~~~l~~l~~~gal~g~~----v~~d~ 610 (660) .||++...++|+||..+|.++-+.|.++...-..+..+ .++.-.+..+..++.=|+.|.+.+.|.|.. |...+ T Consensus 255 g~tl~~~gsDYq~ie~~RVvdKa~R~vR~~Ai~~i~Dr~lnstp~sia~~~~~~~~pLr~M~ks~ei~g~~fpgei~~P~ 334 (376) T protein:vir:37 255 GRTLDVEGGDYQVIENLRVVDKVARKVRLLAIGKIADRSFNSTTSSTEYHKNYFAKPLRDMSKSATINGKDFPGECMPPK 334 (376) T ss_pred CeEeccCCCCeeeehhchHHHHHHHHHHHHHHHHhcCccccCChhHHHHHHHHHhHHHHHHHhhhhhccccccceeecCC Confidence 89998888899999999999999998887776555432 257778888999999999999999999943 43321 Q ss_pred C-CCCHHHhhCCEEEEEEEEEecCcceEEEEEEEEeecCccHHH Q lcl|Aclame:pro 611 T-NNTPAVIDRNEFVATFYLQPARSINYITLNFVATATGADFDE 653 (660) Q Consensus 611 ~-~nt~~~i~~G~~~~~i~~~p~~p~e~i~~~~~~~~~~~~~~e 653 (660) + .-+-.-....++.|-+.+.|.--.+.|+..|--+.. ...| T Consensus 335 d~dI~i~w~sk~~V~I~~~vrPy~cpk~i~~~I~LDls--~~~~ 376 (376) T protein:vir:37 335 DDAITIVWQSKTKVTIYIKVRPYDCPKEITANIFLDLD--SLGE 376 (376) T ss_pred CCceEEEeccCceEEEEEEEeeecCcceeEEEEEEecC--CCCC Confidence 1 011111234668888888899888889888877644 2233 No 54 >protein:vir:3788 Length: 376 # NCBI annotation: tail sheath # Family: family:all:669 # MgeID: mge:328 # MgeName: HP2 # Cross-refs: genbank:acc:NP_536828;genbank:gi:17981837;genbank:GeneID:929216 Probab=98.77 E-value=5.4e-08 Score=60.42 Aligned_cols=356 Identities=11% Similarity=0.038 Sum_probs=175.6 Q ss_pred cccccccccccccccccccceeeeeeccccccccccceeeeeccccCcccce-eecccCCcccceeEEeecccccccccc Q lcl|Aclame:pro 229 ELGDQLEIEIVSKADYDKGASAQLKIYPDGGTRYSTAKAIFGYGPQTDDQYA-IIVRRNDSVVQSVVLSTKRGERDIYGS 307 (660) Q Consensus 229 ~~g~~i~v~i~s~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~g~~~e~~~v~~~~~~~~~~~~ 307 (660) .|+.- .+...-.. .+........+.-.+........ +.+... ..+..--+..+... T Consensus 1 ~~~~v---~vn~~n~~-------------~g~~~~~er~~Lfig~~~~~~~~~~~~~~~------sdld~~lg~~~~~l- 57 (376) T protein:vir:37 1 MFPSV---QINALNQL-------------SGETKEIERHALFVGVGTTNQGKLLALTPD------SDFDKVFGETDTDL- 57 (376) T ss_pred CCCeE---EEeccccc-------------CCCcccccceEEeeccccccccceeeecCc------cchHhhhCCCchHH- Confidence 22211 00000000 00000000000000000000000 000000 00000001111100 Q ss_pred ccchhhhhhcCCceEEEEEecCCCcccceeeeeeccccccccccchhhhhhhhhhhhhhhcCcce-eecccccCCchhhH Q lcl|Aclame:pro 308 NIFIDDFFAKGASNYIFATAQGWPKGFSGVIKLNGGLSSNETVEAGDLMEAWDLFADRESVNAQL-FIAGSCAGESLEVA 386 (660) Q Consensus 308 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 386 (660) -..+..+..|++.++......+.. +..+...+.+.. .+.+.... .++++.... .... T Consensus 58 k~~v~aa~~naG~~~~~~~~~~~~-------------------~~~~~~~Av~~a--~~~~s~E~V~v~~pv~t~-~a~i 115 (376) T protein:vir:37 58 KKQVRAAMLNAGQNWFAHVYIAQE-------------------DGYDFVECVKKA--NQTASFEYCVNTRYLGVD-KASI 115 (376) T ss_pred HHHHHHHHhCCCCcEEEEEEeecC-------------------CchHHHHHHHHh--hhhcCceEEEEecccccc-HHHH Confidence 112344566777776544333211 111233333322 12222222 344443211 2223 Q ss_pred HHHHHHHHHHHhh-ccCeEEEeccccceEEecCCCCcHHHHHHHhhhcccccccccccCcceEEEE-echhccccccccc Q lcl|Aclame:pro 387 STVQKHVVAIGDS-RQDCLVLCSPPRAAVVGIPVNRAVDNLVDWRTASGTYTDNNFNISSTYAAID-GNYKYQYDKYNDV 464 (660) Q Consensus 387 ~~v~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~-~p~~~~~d~~~~~ 464 (660) .+.+........+ .+-.|.++..+.. -.+...+.+..+-...+..+ ..++.+.+..++ .-|- T Consensus 116 ~aa~~~a~el~~~~~Rpv~file~r~~-~~~~~~~e~w~~y~~~~~al------~~gia~~~V~~V~~~~g--------- 179 (376) T protein:vir:37 116 GKLQECYAELLAKFGRRTFFIQAVQGI-NHDQSDGETWDQYVQKLTTL------QQTIVADHVCLVPLLFG--------- 179 (376) T ss_pred HHHHHHHHHHHHhcCCeEEEEEeccCc-CcccccccCHHHHHHHHHHh------hcccccccceeeeeehh--------- Confidence 3333333333334 3556666654321 00111223333333222221 112444444322 1110 Q ss_pred ceeechHHHHHHHHHHhhccCCceecccceeeceeeecccc-------cccCChhhhhhhccccceEEEEecCC-eEEEe Q lcl|Aclame:pro 465 NRWVPLAADIAGLCARTDNISQPWMSPAGYNRGQILNVIKL-------AIETRQAQRDRLYQEAINPVTGTGGD-GYVLY 536 (660) Q Consensus 465 ~~~~p~s~~~AG~~a~~d~~~g~~~span~~~~~v~~~~~~-------~~~~~~~e~~~Ln~~gin~i~~~~g~-G~~~w 536 (660) ...|.+||++|+.. .-++.||.-..-+.+.+.-.. -..++...++.|..+|-.+.+.++|+ |+.+- T Consensus 180 ----n~~G~~aGRl~~aa--VsVadspgRV~tG~l~gl~~~~lp~d~~~~~l~~a~l~aLd~agy~vp~~Y~gy~G~Y~~ 253 (376) T protein:vir:37 180 ----NETGVLAGRLANRA--VTVADSPARVQTGALVSLGSANKPLDKDRNELTLAHLKSLETARYSVPMWYPDYDGYYWA 253 (376) T ss_pred ----hhHHHHHHHHhhcc--cchhhCccceeccccccccccccccCcCcccCCHHHHHHHHhCCCeEEEeeCCCCceEEe Confidence 12588888876542 225778877665555443221 13467788899999999999999985 78777 Q ss_pred cceecCCCCcccceehhhHHHHHHHHHHHHHHHHHhhcCC---CHHHHHHHHHHHHHHHHHHHhcCCeeeE----EEEEe Q lcl|Aclame:pro 537 GDKTATSVPSPFDRINVRRLFNMVKTNIGSASKYRLFELN---NAFTRSSFRTETSQYLQGIKALGGVYNF----KVVCD 609 (660) Q Consensus 537 G~rT~~~~~~~~~~i~vrR~~~~i~~~~~~~~~~~v~epn---~~~~~~~i~~~i~~~l~~l~~~gal~g~----~v~~d 609 (660) ..||+....++++||..+|..+-+.|.++..+-.++...- ++.-.+..+.-+..=|+.|.+..-+.|. +|... T Consensus 254 d~~tl~~~gsDY~~ie~~RVvdKa~R~vR~~ai~~i~D~~lnst~~sia~~~~yi~~pLr~M~~s~~i~g~~fpGeI~~p 333 (376) T protein:vir:37 254 DGRTLDVEGGDYQVIENLRVVDKVARKVRLLAIGKIADRSFNSTTSSTEYHKNYFAKPLRDMSKSATINGKDFPGECMPP 333 (376) T ss_pred CceEeccCCCChhhhhhhhHHHHHHHHHHHHHHHHhCCcccCcchhhHHHHHHHHHHHHHHHHhcchhccccccceeecC Confidence 8899988888999999999999999988887766665422 3444566677777778999888888883 34443 Q ss_pred cC-CCCHHHhhCCEEEEEEEEEecCcceEEEEEEEEeecCccHHH Q lcl|Aclame:pro 610 TT-NNTPAVIDRNEFVATFYLQPARSINYITLNFVATATGADFDE 653 (660) Q Consensus 610 ~~-~nt~~~i~~G~~~~~i~~~p~~p~e~i~~~~~~~~~~~~~~e 653 (660) ++ .-+..-+...++.|.+-+.|.--.++|+..|.-+.. ...| T Consensus 334 ~d~Di~i~w~s~~~V~I~~~v~P~~~pk~Itv~I~Ldls--n~~~ 376 (376) T protein:vir:37 334 KDDAITIVWQSKTKVTIYIKVRPYDCPKEITANIFLDLD--SLGE 376 (376) T ss_pred CCCCceEEeeccceEEEEEEEEeccCCceEEEEEEeecC--CCCC Confidence 32 122223477889999999999999999877666532 1122 No 55 >protein:vir:276 Length: 369 # NCBI annotation: putative tail sheath protein # Family: family:all:669 # MgeID: mge:7 # MgeName: K139 # Cross-refs: genbank:acc:NP_536656;genbank:gi:17975134;genbank:GeneID:929090 Probab=98.77 E-value=2.9e-08 Score=61.88 Aligned_cols=355 Identities=14% Similarity=0.068 Sum_probs=171.5 Q ss_pred ccccccccccccccccccccceeeeeeccccccccc-cceeee-eccccCcccceeecccCCcccceeEEeecccccccc Q lcl|Aclame:pro 228 GELGDQLEIEIVSKADYDKGASAQLKIYPDGGTRYS-TAKAIF-GYGPQTDDQYAIIVRRNDSVVQSVVLSTKRGERDIY 305 (660) Q Consensus 228 g~~g~~i~v~i~s~~~~~~~~~~~~~v~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~v~~~g~~~e~~~v~~~~~~~~~~ 305 (660) -.|++- .+.. +.. ..+.... .-...+ ..+......-.+......+ .+...-+..+.. T Consensus 1 m~~~~V---~in~--------~n~-----~qg~~~~ver~~lfig~g~~~~~~g~~~~~~~~s-----dld~~lg~~ds~ 59 (369) T protein:vir:27 1 MAWPTV---IIKI--------LNL-----MNGPIADIECHFLFVIRGTVSGEVRNLIMVDSTS-----DLDDVLAEASAE 59 (369) T ss_pred CCCCce---EEec--------ccc-----cCCCcccccceEEEEEeccccccccceEEecCcc-----chHhhcCCcChh Confidence 222211 0000 000 0000000 000000 0011000000000000000 000000111111 Q ss_pred ccccchhhhhhcCCceEEEEEecCCCcccceeeeeeccccccccccchhhhhhhhhhhhhhhcCcce-eecccccCCchh Q lcl|Aclame:pro 306 GSNIFIDDFFAKGASNYIFATAQGWPKGFSGVIKLNGGLSSNETVEAGDLMEAWDLFADRESVNAQL-FIAGSCAGESLE 384 (660) Q Consensus 306 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 384 (660) . -..+..+..|++..+..... +.. +..+...+.+... +.+...+ .++++. .... T Consensus 60 l-k~~v~aa~~naG~~w~a~~~-p~~-------------------~~~~~~~Av~~a~--~~~s~E~V~v~~p~--t~~a 114 (369) T protein:vir:27 60 G-LAIVKAAQLNGKQAWTAGVM-ILS-------------------EEDNWQDAVKKAN--EVSSFEFVVLGFDA--ETKA 114 (369) T ss_pred H-HHHHHHHHhCCCCceEEEEE-EeC-------------------CchhHHHHHHhhh--hhCCccEEEEecCc--ccHH Confidence 0 11234566677766543222 111 1122333333221 2222223 233321 1112 Q ss_pred hHHHHHHHHHHHHhhc-cCeEEEeccccceEEecCCCCcHHHHHHHhhhcccccccccccCcceEEEEechhcccccccc Q lcl|Aclame:pro 385 VASTVQKHVVAIGDSR-QDCLVLCSPPRAAVVGIPVNRAVDNLVDWRTASGTYTDNNFNISSTYAAIDGNYKYQYDKYND 463 (660) Q Consensus 385 ~~~~v~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~p~~~~~d~~~~ 463 (660) ...+.+......-.+. +..|+++..+-.. -+...+.+.++ |...... ...++.+.+..++.-+.... T Consensus 115 ~i~aaq~~a~el~~~~~R~vffi~e~~~~~-~~~~~~e~w~d---y~a~l~a---l~~g~a~~~V~vv~~~~~~g----- 182 (369) T protein:vir:27 115 MIEDAITLRTELKNSLGREVGVLCQLPAIN-NDPTNGQTWSE---WLADTVD---IPKDVASEYISVVPNVHAAG----- 182 (369) T ss_pred HHHHHHHHHHHHHHhcCCeEEEEEeccccC-CCccccCCHHH---HHHHHHH---HhhccCcccceeeeeecccc----- Confidence 2233333333333332 4466665432100 01112233333 3222111 12236677777773332211 Q ss_pred cceeechHHHHHHHHHHhhccCCceecccceeeceeeecccc-----cccCChhhhhhhccccceEEEEecCC-eEEEec Q lcl|Aclame:pro 464 VNRWVPLAADIAGLCARTDNISQPWMSPAGYNRGQILNVIKL-----AIETRQAQRDRLYQEAINPVTGTGGD-GYVLYG 537 (660) Q Consensus 464 ~~~~~p~s~~~AG~~a~~d~~~g~~~span~~~~~v~~~~~~-----~~~~~~~e~~~Ln~~gin~i~~~~g~-G~~~wG 537 (660) .-.|.+||++|.. ..-++.||+-..-+.+.|...+ -..++.+.+..|..+|-.+.+.++|. |+-+-+ T Consensus 183 -----n~~G~~aGRl~n~--aVsIadsp~RVktG~l~g~~~~p~d~~g~~l~~a~l~aLd~agysvp~~Y~gy~G~Yw~d 255 (369) T protein:vir:27 183 -----DTLGKYAGRLANK--EVSIADSPARVQTGSVLGNTELMKDKAGKALDLATLKALESNRIAVPMWYPDYPGQYWTT 255 (369) T ss_pred -----chHHHHHHHHHhc--ccchhcCcceeeecccccccccccCCCCcccCHHHHHHHHhCCCeEEEeeCCCCceEEeC Confidence 2357888888753 2225778877665555553221 13356677889999999999999985 787778 Q ss_pred ceecCCCCcccceehhhHHHHHHHHHHHHHHHHHhhcCC---CHHHHHHHHHHHHHHHHHHHhcCCeeeEEEEEecC-CC Q lcl|Aclame:pro 538 DKTATSVPSPFDRINVRRLFNMVKTNIGSASKYRLFELN---NAFTRSSFRTETSQYLQGIKALGGVYNFKVVCDTT-NN 613 (660) Q Consensus 538 ~rT~~~~~~~~~~i~vrR~~~~i~~~~~~~~~~~v~epn---~~~~~~~i~~~i~~~l~~l~~~gal~g~~v~~d~~-~n 613 (660) .||++...++|+||..+|..+-+.|.++...-..+..|- ++.-.+..+..+..=|+.|.+.+ + .+.|.-.++ .- T Consensus 256 ~~tl~~~gsDYq~iE~~RVvdKa~R~vR~~Ai~~i~Dr~lnstp~sia~~~~~~~~pLr~M~ks~-f-pgei~~P~d~dI 333 (369) T protein:vir:27 256 GRTLDVPGGDYQDIRHIRVAMKAARKVRIRAIARIADRTLNSTPQSIAAAKLYFTQDLRTMALTG-V-PGEIYPPEDEDI 333 (369) T ss_pred ceEeccCCCCeehhhhhhHHHHHHHHHHHHHHHHhcCcccccChhHHHHHHHHHhhHHHHHHhhc-C-CeEEecCCCCce Confidence 899988888999999999999999988877766555432 45566777777788888886553 2 223332211 00 Q ss_pred CHHHhhCCEEEEEEEEEecCcceEEEEEEEEeecCc Q lcl|Aclame:pro 614 TPAVIDRNEFVATFYLQPARSINYITLNFVATATGA 649 (660) Q Consensus 614 t~~~i~~G~~~~~i~~~p~~p~e~i~~~~~~~~~~~ 649 (660) +-.-....++.|-+.+.|.--.+.|+.+|.-+.+.- T Consensus 334 ~i~w~~k~~V~I~~~vrP~~~pk~it~~I~ldl~~~ 369 (369) T protein:vir:27 334 QIKWVNSTDVEIYMSVQPYECPVKITIAISVKQGDY 369 (369) T ss_pred EEEeeccceEEEEEEEeeccCCceEEEEEEEeccCC Confidence 001114557888888899999999999999886654 No 56 >protein:vir:78782 Length: 370 # NCBI annotation: putative tail sheath protein # Family: family:all:669 # MgeID: mge:1857 # MgeName: phiO18P # Cross-refs: genbank:acc:YP_001285652;genbank:gi:148727158;genbank:GeneID:5220132 Probab=98.64 E-value=8.9e-08 Score=59.24 Aligned_cols=348 Identities=11% Similarity=0.005 Sum_probs=168.8 Q ss_pred eeeeeccccccccccceeeeeccccCcccceeecccCCc-ccceeEEeeccccccccccc-----cchhhhhhcCCceEE Q lcl|Aclame:pro 250 AQLKIYPDGGTRYSTAKAIFGYGPQTDDQYAIIVRRNDS-VVQSVVLSTKRGERDIYGSN-----IFIDDFFAKGASNYI 323 (660) Q Consensus 250 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~-~~e~~~v~~~~~~~~~~~~~-----~~~~~~~~~g~~~~~ 323 (660) ..+.+..+.. ..........+.++-+ +..... ....+.+....+-....+.. ..+..+..|++.++. T Consensus 1 ~~~~v~vn~~------n~~~g~~~~~er~~lf-ig~~~~~~g~~~~~~~~sdld~~l~~~ds~lk~~v~aa~~naG~~~~ 73 (370) T protein:vir:78 1 MWPYVQIYNL------NQMQGPVTEVERHLLF-IGSAASNTGKLLSLNAQSDFDQLLGAADSELKANLLAARDNAGQNWS 73 (370) T ss_pred CCceEEEeec------cccCCCcCccceeEEE-EecccccccceEeecCccCHHHhcCCcChhHHHHHHHHHhCCCCceE Confidence 1111111110 0011111112222222 111111 11111222111111111110 112344556665553 Q ss_pred EEEecCCCcccceeeeeeccccccccccchhhhhhhhhhhhhhhcCcce-eecccccCCchhhHHHHHHHHHHHHhhc-c Q lcl|Aclame:pro 324 FATAQGWPKGFSGVIKLNGGLSSNETVEAGDLMEAWDLFADRESVNAQL-FIAGSCAGESLEVASTVQKHVVAIGDSR-Q 401 (660) Q Consensus 324 ~~~~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~ 401 (660) ..... .+ +..+...+.+... +.+...+ .++++.. ......+++........+. + T Consensus 74 ~~~~p-~~-------------------~~~d~~~Av~~a~--~~~s~E~V~v~~~~s--~~a~~~a~~~~a~el~n~~~R 129 (370) T protein:vir:78 74 AAAYV-LP-------------------TDKPWLDAARDAQ--QTQSFEGVVVLGQEW--HQAAINAAHALNQELIAKWGR 129 (370) T ss_pred EEEEE-ec-------------------CchhHHHHHHHHH--hhCCccEEEEecCcc--hHHHHHHHHHHHHHHHHhcCC Confidence 32211 10 1223444443332 2222222 3333211 1122233333333333333 4 Q ss_pred CeEEEeccccceEEecCCCCcHHHHHHHhhhcccccccccccCcceEEEEechhcccccccccceeechHHHHHHHHHHh Q lcl|Aclame:pro 402 DCLVLCSPPRAAVVGIPVNRAVDNLVDWRTASGTYTDNNFNISSTYAAIDGNYKYQYDKYNDVNRWVPLAADIAGLCART 481 (660) Q Consensus 402 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~p~~~~~d~~~~~~~~~p~s~~~AG~~a~~ 481 (660) ..|.++..+.. ..+.+..+ |...... ...++.+.+..+|--|.. -.-|.+||.++.. T Consensus 130 pv~file~~~~-----~~~e~w~~---y~~~l~a---l~~gia~~~V~vvp~~~g------------~~~G~~aGRL~na 186 (370) T protein:vir:78 130 WQFMLLAVPAI-----ADEQDWAT---YEAELAT---LQDGIAASSVSLIPQLWP------------TLAGAYAGRLCNR 186 (370) T ss_pred eEEEEEeecCC-----CCcCCHHH---HHHHHHH---hhhccccccceEEeeecc------------ccHHHHHHHHhcC Confidence 56666654321 22333333 2222111 122355666666644321 1137788876542 Q ss_pred hccCCceecccceeeceeeecc-----cccccCChhhhhhhccccceEEEEecCC-eEEEecceecCCCCcccceehhhH Q lcl|Aclame:pro 482 DNISQPWMSPAGYNRGQILNVI-----KLAIETRQAQRDRLYQEAINPVTGTGGD-GYVLYGDKTATSVPSPFDRINVRR 555 (660) Q Consensus 482 d~~~g~~~span~~~~~v~~~~-----~~~~~~~~~e~~~Ln~~gin~i~~~~g~-G~~~wG~rT~~~~~~~~~~i~vrR 555 (660) . --+..+|.-...+.+.+.. ..-..++...++.|..+|-.+.+.++|. |+.+-..||++...++++||..+| T Consensus 187 a--vsVadsP~Rv~tG~l~gl~~~p~d~~~~~l~~a~l~aLd~agy~vp~~Y~gy~G~Y~~d~~tl~~~gsDYq~ie~~R 264 (370) T protein:vir:78 187 A--VSIADSPCRVKTGALVGLGNKPVGKDGIPLPLATLQTLEANRYSVPMWYPDYDGIYWADGRTLDAEGGDYQVIENLR 264 (370) T ss_pred e--eeecccceeeeccccccccccccccCCcccCHHHHHHHHhCCCeEEEeeCCCCceEEeCceEeccCCCChhhhhhhh Confidence 1 1266778765555444421 1234567788999999999999999985 787778899988888999999999 Q ss_pred HHHHHHHHHHHHH-HHHhhcCCC--HHHHHHHHHHHHHHHHHHHhcCCeee--EEEEEecCC---CCHHHhhCCEEEEEE Q lcl|Aclame:pro 556 LFNMVKTNIGSAS-KYRLFELNN--AFTRSSFRTETSQYLQGIKALGGVYN--FKVVCDTTN---NTPAVIDRNEFVATF 627 (660) Q Consensus 556 ~~~~i~~~~~~~~-~~~v~epn~--~~~~~~i~~~i~~~l~~l~~~gal~g--~~v~~d~~~---nt~~~i~~G~~~~~i 627 (660) ..+-+.|.++..+ +...+|-.| +.-....+.....=|+++...+.+.| |.-.+.... -+..-....++.|.+ T Consensus 265 VvdKa~R~vR~~ai~~i~D~~lnst~gsia~~~~~~~~~L~ema~s~~i~~~~fpgeI~~p~d~Di~i~w~s~~~v~I~~ 344 (370) T protein:vir:78 265 IAYKVARRMRLRAIARIGDRSFNSTPGSTAAAITYFGKDLREMAKSTTINGQPFPGDIASPQDGDIRIQWVAKNLVSVFV 344 (370) T ss_pred HHHHHHHHHHHHHHHHhCCcccCCCCcchhHHHHHHHhhHHHHHhhhhhcccccceeEeccCCCcceEEeeccceEEEEE Confidence 9999999999555 444444322 22334444445555666667787777 433443211 122234678899999 Q ss_pred EEEecCcceEEEEEEEEeecCccHHHHHH Q lcl|Aclame:pro 628 YLQPARSINYITLNFVATATGADFDELIG 656 (660) Q Consensus 628 ~~~p~~p~e~i~~~~~~~~~~~~~~e~~~ 656 (660) .+.|.--.+.|+.+|.-+.. +++=-+ T Consensus 345 ~v~P~~~pk~Itv~I~LDls---~e~~~~ 370 (370) T protein:vir:78 345 VVRTVDCPKGITVNIMLDLS---LNNGEG 370 (370) T ss_pred EEEeccCCceEEEEEEEeec---cccCCC Confidence 99999889999888876533 111111 No 57 >protein:vir:1996 Length: 495 # NCBI annotation: major tail subunit # Family: family:all:369 # MgeID: mge:320 # MgeName: Mu # Cross-refs: genbank:acc:NP_050643;genbank:gi:9633530;genbank:GeneID:2636269 Probab=98.63 E-value=1.8e-07 Score=57.62 Aligned_cols=448 Identities=10% Similarity=0.074 Sum_probs=207.4 Q ss_pred CccccCceEEEEecCCcccccCCc--CceeEEeecc---cCCCCccEEecCHHHHHHHcCCcCCcchhHHHHHHHHH-hc Q lcl|Aclame:pro 1 MALLSPGVELKETTVQSTVVNNST--GTAALAGKFQ---WGPAFQIKQITDEVALVDMFGTPNTDTADYFMSAMNFL-QY 74 (660) Q Consensus 1 ~~~~~PGVyveE~~~~~~i~gv~T--s~~afvG~~~---~Gpv~~p~~i~s~~e~~~~fG~~~~~~~~~~~v~~~f~-ng 74 (660) =.+..||+|+| ++.+....|.++ --.-+||..- ..|.++|++|+|..|-...||. .+.+..+++.|.. |- T Consensus 11 ~~iRvP~~y~E-~dns~A~~g~~~~~q~vLiiGq~la~gs~~~~~pv~v~s~~~a~~~fG~---GS~la~M~~a~~~~n~ 86 (495) T protein:vir:19 11 SDVRVPLTYIE-FDNSNAVSGTPAPRQRVLMFGQSGSKASAAPNVPVRIRSGSQASAAFGQ---GSMLALMADAFLNANR 86 (495) T ss_pred cccccCeEEEE-EccCCCCcCCcCCCceEEEEEecCcccccccceeEEecCHHHHHHhcCc---CcHHHHHHHHHHHhCC Confidence 45679999998 554444444444 3346888754 3477999999999999999994 3555666777766 44 Q ss_pred CCEEEEEEccCccccccccccccccccccccccccccccceeEEeccccccccccceeeeecCCceeeEEeecccccccc Q lcl|Aclame:pro 75 GNDLRVVRAVDRDTAKNSSPVAGNINFTISSAGTNYRVGDKVVVKYSTDIIEPDGEVTSVDSDGKILNIFIPSGKIIAKA 154 (660) Q Consensus 75 G~~~~vvRv~~~~~~~~a~~~~~~l~~t~~~~g~~~~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~a 154 (660) -.++|++-+.|....++ .+.+.++-.+...+ .+.+.+. +....+....++. + T Consensus 87 ~~~l~~i~~~D~aG~aA----~g~it~tg~at~~G-----~l~l~I~----------------g~~v~v~V~~gdT---a 138 (495) T protein:vir:19 87 VAELWCIPQGNGTGNAA----VGEISLSGTAGENG-----SLVTYIA----------------GQRLAVSVAAGAT---G 138 (495) T ss_pred cceEEEEeeCChhhcee----EEEEEEeecCCCCc-----EEEEEEC----------------CEEEEEEecCCCC---H Confidence 55899999875322111 12222221111110 0111111 0000000000000 0 Q ss_pred cccccccccccceeeeeeccccccceeeeecccccccccccccccccccccccceeeecccccccccccccccccccccc Q lcl|Aclame:pro 155 KEIGEYPELGSNWTAEMSGSSSGLSAVITIDSVVMDSGILLTEVETSEEAITSLTFQESIKKYGVPGVVALYPGELGDQL 234 (660) Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~g~~g~~i 234 (660) ..+... +...+ .... .++.+........ ...........+...|. +|.+ T Consensus 139 a~vA~a-----------------l~aai-----na~~--~lPvTA~~~~~~~------~~~a~~~VtlTAr~kG~-~n~i 187 (495) T protein:vir:19 139 AALADL-----------------LVARI-----KGQP--DLPVTAEVRADSG------DDDTHADVVLSAKFTGA-LSAV 187 (495) T ss_pred HHHHHH-----------------HHHHh-----cCCc--cCceEEEeeccCC------CCcCceeEEEEEeeccc-cccc Confidence 000000 00000 0000 0000000000000 00000000001111110 0000 Q ss_pred cccccccccccccceeeeeeccccccccccceeeeeccccCcccceeecccCCcccceeEEeeccccccccccccchhhh Q lcl|Aclame:pro 235 EIEIVSKADYDKGASAQLKIYPDGGTRYSTAKAIFGYGPQTDDQYAIIVRRNDSVVQSVVLSTKRGERDIYGSNIFIDDF 314 (660) Q Consensus 235 ~v~i~s~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~e~~~v~~~~~~~~~~~~~~~~~~~ 314 (660) .+. + . ++. T Consensus 188 di~---------------------------------------------------------~--~----------~~~--- 195 (495) T protein:vir:19 188 DVR---------------------------------------------------------W--N----------YYA--- 195 (495) T ss_pred eeE---------------------------------------------------------E--E----------eec--- Confidence 000 0 0 000 Q ss_pred hhcCCceEEEEEecCCCcccce-eeeeeccccccccccchhhhhhhhhhhhhhhcCcceeecccccCCchhhHHHHHHHH Q lcl|Aclame:pro 315 FAKGASNYIFATAQGWPKGFSG-VIKLNGGLSSNETVEAGDLMEAWDLFADRESVNAQLFIAGSCAGESLEVASTVQKHV 393 (660) Q Consensus 315 ~~~g~~~~~~~~~~~~~~~~~~-~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 393 (660) | +..+....- ....+||.-. .|+..+++.+. ...-.+++++.... .. .++| T Consensus 196 ---g---------e~~p~Glt~titamsgGag~------PDia~alaal~---~~~~~~I~~P~tD~---as----L~al 247 (495) T protein:vir:19 196 ---G---------ETTPYGIITAFKAASGKNGN------PDISASIAGMG---DLQYKYIVMPYTDE---PN----LNLL 247 (495) T ss_pred ---c---------cccccceeEEEEecCCCCCC------cchHHHHHHhc---cCCCcEEEEecCcH---HH----HHHH Confidence 0 000000000 1112333221 22333333332 22233444433221 11 2445 Q ss_pred HHHHhhccCeEEEeccccceEEecCCCCcHHHHHHHhhhcccccccccccCcceEEEEechhcccccccccceeechH-- Q lcl|Aclame:pro 394 VAIGDSRQDCLVLCSPPRAAVVGIPVNRAVDNLVDWRTASGTYTDNNFNISSTYAAIDGNYKYQYDKYNDVNRWVPLA-- 471 (660) Q Consensus 394 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~p~~~~~d~~~~~~~~~p~s-- 471 (660) .+|++.+-+. +. .+..+.-....-|..+..+|-.. .++.|..+.+ +. +. .-||. T Consensus 248 ~~~l~~rw~~---~~-q~~g~~~~a~~gT~~~l~t~g~~----------~N~~~it~~~--~~------gs--p~~~~~~ 303 (495) T protein:vir:19 248 RTELQERWGP---VN-QADGFAVTVLSGTYGDISTFGVS----------RNDHLISCMG--IA------GA--PEPSYLY 303 (495) T ss_pred HHHHHHhhhH---HH-hcCeEEEEeecCCHHHHHHhhhc----------cCCceEEEEe--cC------CC--CCcHHHH Confidence 5555443221 11 11222223334466777776554 5566765542 11 11 11333 Q ss_pred -HHHHHHHH---HhhccCCceeccc-ceeeceeeecccccccCChhhhhhhccccceEEEEecCCeEEEecceec---C- Q lcl|Aclame:pro 472 -ADIAGLCA---RTDNISQPWMSPA-GYNRGQILNVIKLAIETRQAQRDRLYQEAINPVTGTGGDGYVLYGDKTA---T- 542 (660) Q Consensus 472 -~~~AG~~a---~~d~~~g~~~spa-n~~~~~v~~~~~~~~~~~~~e~~~Ln~~gin~i~~~~g~G~~~wG~rT~---~- 542 (660) +.+|+..| +.|..| |- ...|.|+..+ .....++..|+|.|.-+||.++.--.++-..+-=..|. + T Consensus 304 AAA~aa~~A~~l~~DPAr-----PL~tl~L~Gi~~p-~~~~r~~~~ern~LL~~Gist~~V~~~G~V~I~R~ITTY~~n~ 377 (495) T protein:vir:19 304 AATLCAVASQALSIDPAR-----PLQTLTLPGRMPP-AVGDRFTWSERNALLFDGISTFNVNDGGEMQIERMITMYRTNK 377 (495) T ss_pred HHHHHHHHHHHhhccccc-----ccCceeecceecC-CccccCChHHHHHHHhCCcceEEECCCCeEEEEeeeeeeeecC Confidence 33333333 456544 33 3456666543 44666789999999999999987655544555555554 1 Q ss_pred --CCCcccceehhhHHHHHHHHHHHHHHHHH-hhcCCCHH-----------HHHHHHHHHHHHHHHHHhcCCeeeE---E Q lcl|Aclame:pro 543 --SVPSPFDRINVRRLFNMVKTNIGSASKYR-LFELNNAF-----------TRSSFRTETSQYLQGIKALGGVYNF---K 605 (660) Q Consensus 543 --~~~~~~~~i~vrR~~~~i~~~~~~~~~~~-v~epn~~~-----------~~~~i~~~i~~~l~~l~~~gal~g~---~ 605 (660) ..|..|..|+.-|+.+|+.+.++...... =-+.+-.. +-..||..+-.-+++|..+|.+..+ + T Consensus 378 ~G~~D~syLDi~T~~tl~yvr~~~r~~i~~kfpR~KLa~d~~~~~~gq~IvTp~~ir~ell~~~~~le~~given~~~~~ 457 (495) T protein:vir:19 378 YGDSDPSYLNVNTIATLSYLRYSLRTRITQKFPNYKLASDGTRFATGQAVVTPSVIKTELLALFEEWENAGLVEDFDTFK 457 (495) T ss_pred CCCcchhhhhhHHHHHHHHHHHHHHHHHhhhcCCcccccCCCCCCCcccccChHHHHHHHHHHHHhhhhhccccChhhhc Confidence 22345899999999999999999877643 22333222 5678999999999999999988773 2 Q ss_pred --EEEecCCCCHHHhhCCEEEEEEEEEecCcceEEEEEEEEee Q lcl|Aclame:pro 606 --VVCDTTNNTPAVIDRNEFVATFYLQPARSINYITLNFVATA 646 (660) Q Consensus 606 --v~~d~~~nt~~~i~~G~~~~~i~~~p~~p~e~i~~~~~~~~ 646 (660) +.+.+.-+ +.+|+.+.+-...+-+.+-+-.+++-.. T Consensus 458 ~~LiVerd~~-----dpnRln~~~p~d~vn~L~V~A~~i~f~L 495 (495) T protein:vir:19 458 EELYVARNKD-----DKDRLDVLCGPNLINQFRIFAAQVQFIL 495 (495) T ss_pred ceeEEEECCC-----CCcEEEEEecceeeCceeeeeeeeeeeC Confidence 33332211 1246667666666666665544444433 No 58 >protein:vir:95263 Length: 450 # NCBI annotation: Phage conserved protein # Family: family:all:396 # MgeID: mge:1561 # MgeName: Felix 01 # Cross-refs: genbank:acc:NP_944896;genbank:gi:38707836;genbank:GeneID:2744049 Probab=98.42 E-value=7.2e-07 Score=54.28 Aligned_cols=422 Identities=12% Similarity=0.032 Sum_probs=161.5 Q ss_pred EEeecccccccccccccccccccceeeeeeccccccceeeeecc-cccccccccccccccccccccceeeeccccccccc Q lcl|Aclame:pro 143 IFIPSGKIIAKAKEIGEYPELGSNWTAEMSGSSSGLSAVITIDS-VVMDSGILLTEVETSEEAITSLTFQESIKKYGVPG 221 (660) Q Consensus 143 ~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (660) .+.... . ..+.+ . ..... ...+.. .+.... .....-. ..|..... T Consensus 1 ~~s~iV-------n--V~i~~--------~--~~a~~-~~~f~~~l~~~~~------~~~~~r~--~~yss~~~------ 46 (450) T protein:vir:95 1 MWNPIV-------N--VDITL--------N--TAGTT-REGFGLPLFLAST------DNFEERV--RGYTSLTE------ 46 (450) T ss_pred CCCceE-------E--Eeecc--------c--ccccc-cccceeEEEEcCC------CCCccce--eeecCHHH------ Confidence 000000 0 00000 0 00000 000000 000000 0000000 00000000 Q ss_pred ccccccccccccccccccccccccccceeeeeeccccccccccceeeeeccccCcccceeecccCCcccceeE--Eeecc Q lcl|Aclame:pro 222 VVALYPGELGDQLEIEIVSKADYDKGASAQLKIYPDGGTRYSTAKAIFGYGPQTDDQYAIIVRRNDSVVQSVV--LSTKR 299 (660) Q Consensus 222 ~~a~~~g~~g~~i~v~i~s~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~e~~~--v~~~~ 299 (660) ... .+|..-........-+.... .........-.+..+...........+.. +.+..+|....... ++... T Consensus 47 -V~~---~FG~~S~ey~aA~~yF~q~p-~p~~l~igr~~~~~t~~~~~~~~~~~~g~--lt~tv~G~~~~~~~i~~s~a~ 119 (450) T protein:vir:95 47 -VAE---DFDENTAAYKAAKQLWSQTP-KVTQLYIGRRAMQYTVSIPDAVTESTDYS--ITVAAGGGISQPYQYTAQSSD 119 (450) T ss_pred -HHH---hcCCCcHHHHHHHHHHhCCC-cccEEEEEeeccchhhhhhhhhcccccee--EEEEecceeeeeeEEEEEecC Confidence 000 00000000000000000000 00000000000000000000000111111 11122222221111 11111 Q ss_pred ccccccccccchhhhhhcCCceEEE-EEecCCCcccceeeee-eccccccccc------------cchhhhhhhhhhhhh Q lcl|Aclame:pro 300 GERDIYGSNIFIDDFFAKGASNYIF-ATAQGWPKGFSGVIKL-NGGLSSNETV------------EAGDLMEAWDLFADR 365 (660) Q Consensus 300 ~~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~~-~gg~~~~~~~------------~~~~~~~~~~~~~~~ 365 (660) ... .....+.... .+...... .............+.. .++......+ .......+ +... T Consensus 120 s~~---~va~~~~tai-~~~~~~~~~~~~~s~g~~~~~t~~~~~~~~~~~~~l~~~~~~~~~~g~~aet~~~a---~~a~ 192 (450) T protein:vir:95 120 TAE---NVLQQFKTQI-EADPTIKDKVSVNVTGSNGSATMIIAKAGDNDFVKVTTTAQTVYIASTTADTASTA---LAAI 192 (450) T ss_pred Chh---hHHHHhhhhh-cccceeeeeeeeeeecccceeeeeeeccccchhhccccccceeEecccccccHHHH---HHHH Confidence 000 0000000000 00000000 0000000000000000 0000000000 00001111 1111 Q ss_pred hhcCcceeecccccCCchhhHHHHHHHHHHHHhhccCeEEEeccccceEEecCCCCcHHHHHHHhhhcccccccccccCc Q lcl|Aclame:pro 366 ESVNAQLFIAGSCAGESLEVASTVQKHVVAIGDSRQDCLVLCSPPRAAVVGIPVNRAVDNLVDWRTASGTYTDNNFNISS 445 (660) Q Consensus 366 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s 445 (660) .....+.... .. +..+ ..-..+|...++.....|........ +++........+....-.. -+. T Consensus 193 ~~~~~~w~~~--~~-~~~~--~~~i~a~a~w~~a~~~~f~~~~~~~~-~~~~~~~~~~~~i~~~l~~----------~~~ 256 (450) T protein:vir:95 193 EAYSTDWYFI--AA-EDRT--QQFVLAMASEIQARKKIFFTANSDVT-ALQGTELASANDVPAQLAK----------NMY 256 (450) T ss_pred HHhhCCeEEE--Ee-cCCC--HHHHHHHHHHHhhcCcEEEEEcCCch-hhhhhhhhcccchHHHHHh----------ccC Confidence 1111111100 00 0001 11123333444433333333221100 0000000000000000000 011 Q ss_pred ceEE-EEechhcccccccccceeechHHHHHHHHHHhhccCCceecccceeeceeeecc--cccccCChhhhhhhccccc Q lcl|Aclame:pro 446 TYAA-IDGNYKYQYDKYNDVNRWVPLAADIAGLCARTDNISQPWMSPAGYNRGQILNVI--KLAIETRQAQRDRLYQEAI 522 (660) Q Consensus 446 ~~~~-~~~p~~~~~d~~~~~~~~~p~s~~~AG~~a~~d~~~g~~~span~~~~~v~~~~--~~~~~~~~~e~~~Ln~~gi 522 (660) .|.. +|++ .+. .-.+.+.++|.....+..+--| .+|.+.||..-. +....++..|.+.|.++++ T Consensus 257 ~~t~~~y~~-------~~~---~~~~~aa~~g~~~~~~~g~~T~---~fk~l~Gv~~~v~~~~~~~lt~~~~~al~~~~~ 323 (450) T protein:vir:95 257 TRTVCLWHH-------AAA---EDYPEMAYIAYGAPYDAGSIAW---GNAQLTGVAASLQPSNQRPLTSIQKSALDVRHC 323 (450) T ss_pred CeeEEEeeC-------CCc---hhHHHHHHHHHhhhcccceeee---ccccccceeeeccCccccccchHHHHHHHhCCc Confidence 1222 2221 111 1124566666655554433233 367766665311 2234688999999999999 Q ss_pred eEEEEecCCeEEEecceecCCCCcccceehhhHHHHHHHHHHHHHHHHHhh------cCCCHHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 523 NPVTGTGGDGYVLYGDKTATSVPSPFDRINVRRLFNMVKTNIGSASKYRLF------ELNNAFTRSSFRTETSQYLQGIK 596 (660) Q Consensus 523 n~i~~~~g~G~~~wG~rT~~~~~~~~~~i~vrR~~~~i~~~~~~~~~~~v~------epn~~~~~~~i~~~i~~~l~~l~ 596 (660) |++.++.+.+ .++..+|+++ .||-++|-.+|++..|+..+....- =|-|..=...|+..|+.-|++.. T Consensus 324 n~y~~~~~~~-~~~~G~~~~G-----~~iD~~~~~~wl~~~iq~~l~~ll~~~~~~KiPy~~~G~~~i~a~i~~~l~~a~ 397 (450) T protein:vir:95 324 NFIDLDGGVP-VVRRGITSGG-----EWIDIIRGVDWLESDLKTSLRDLLINQKGGKITYDDTGITRIRQVIETSLQRAV 397 (450) T ss_pred EEEEEecCce-eeeCCeeeCc-----chhHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccChhhHHHHHHHHHHHHHHHH Confidence 9999987765 4778888765 2688999999999999999987652 26778888899999999999999 Q ss_pred hcCCeeeEEEEEec-CCCCHHHhhCCEE-EEEEEEEecCcceEEEEEEEEeec Q lcl|Aclame:pro 597 ALGGVYNFKVVCDT-TNNTPAVIDRNEF-VATFYLQPARSINYITLNFVATAT 647 (660) Q Consensus 597 ~~gal~g~~v~~d~-~~nt~~~i~~G~~-~~~i~~~p~~p~e~i~~~~~~~~~ 647 (660) ++|.|.||.|.+.+ +..++.|+.+.++ -+.+.+.....++++.|+...+-. T Consensus 398 ~~G~Ia~~~V~~~~~~~~~~~dr~~R~~~~i~~~~~laGAIh~~~i~~~v~~~ 450 (450) T protein:vir:95 398 NRNFLSSYTVNVPKASQVALADKKARILKDVTFAGILAGAILDVDLKGTVAYE 450 (450) T ss_pred hcCcccceeEecCChHhcCHHHHhccCCCCeeEEEEEccceEEEEEEEEEEeC Confidence 99999999998774 7889999999887 499999999999999999888876 No 59 >protein:vir:80052 Length: 331 # NCBI annotation: gp14 # Family: family:all:396 # MgeID: mge:1876 # MgeName: B054 # Cross-refs: genbank:acc:YP_001468718;genbank:gi:157325298;genbank:GeneID:5601743 Probab=97.94 E-value=9.9e-06 Score=48.02 Aligned_cols=301 Identities=16% Similarity=0.083 Sum_probs=148.7 Q ss_pred cCcccceeecccCCcccceeEEeeccccccccccccchhhhhhcCC-ceE-EEEEecCCCccccee--------eeeecc Q lcl|Aclame:pro 274 QTDDQYAIIVRRNDSVVQSVVLSTKRGERDIYGSNIFIDDFFAKGA-SNY-IFATAQGWPKGFSGV--------IKLNGG 343 (660) Q Consensus 274 ~~~~~~~~~v~~~g~~~e~~~v~~~~~~~~~~~~~~~~~~~~~~g~-~~~-~~~~~~~~~~~~~~~--------~~~~gg 343 (660) ..+.-..+.+..+-. .+......+ ...++..+. .++ .....+....+.... .-++-+ T Consensus 1 ~~~~iv~V~v~~~~~---------~~~~~~~~~----~~~~~~~~t~~~~~~y~s~~~v~~d~~~~~~~Ykaa~~~f~Q~ 67 (331) T protein:vir:80 1 MVETITDVRVHISVL---------YPSPRIGLG----RPAIFVKGTAMGYKEYTTLEELKDTFADNTEVYAKAKAVFLQK 67 (331) T ss_pred Cccceecceeeeccc---------ccccccccC----cceeEEeccccceEEEechhhhccCCCCCcHHHHHHHHHHhcc Confidence 000000111100000 000000000 000000000 000 000011000000000 000000 Q ss_pred cccccccc-----chhhhhhhhhhhhhhhcCcceeecccccCCchhhHHHHHHHHHHHHhhccCeEEEeccccceEEecC Q lcl|Aclame:pro 344 LSSNETVE-----AGDLMEAWDLFADRESVNAQLFIAGSCAGESLEVASTVQKHVVAIGDSRQDCLVLCSPPRAAVVGIP 418 (660) Q Consensus 344 ~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 418 (660) . .+..+. +.....+. ..... -.-.++.+.. .+.++ ..++...++..+..|.+++. . T Consensus 68 ~-~~~~i~v~~~~~~~~~~a~--~a~~~-~~w~~~~~~~---~~~~~----~~a~a~~~~a~~~~f~~~~~--------~ 128 (331) T protein:vir:80 68 D-RPDTVAVITYEDTKLLEAA--EAYFL-KSWHFALLAE---FKAAD----ALALSNLIEEQKFKFAVFQV--------T 128 (331) T ss_pred C-ccceEEEeccchHHHHHHH--HHhcc-CceeEEEeec---CCHHH----HHHHHHHHhhCCcEEEEEec--------C Confidence 0 000000 00000000 00000 0001111111 11111 22344444444444443321 0 Q ss_pred CCCcHHHHHHHhhhcccccccccccCcceEEEEechhcccccccccceeechHHHHHHHHHHhhccCCceeccccee-ec Q lcl|Aclame:pro 419 VNRAVDNLVDWRTASGTYTDNNFNISSTYAAIDGNYKYQYDKYNDVNRWVPLAADIAGLCARTDNISQPWMSPAGYN-RG 497 (660) Q Consensus 419 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~p~~~~~d~~~~~~~~~p~s~~~AG~~a~~d~~~g~~~span~~-~~ 497 (660) ....+..... .+....++++. .+. -+.+.+.|.++..+..+--| ++|. +. T Consensus 129 ---~~~~~~~~~~------------~~~t~~~~~~~-------~~~----~~~aa~~g~~~~~~~g~~t~---~fk~~l~ 179 (331) T protein:vir:80 129 ---AVADITPLAK------------NTRTIAIVHSK-------TGE----KLDAALIGNVASLPVGSATW---KGRHGLA 179 (331) T ss_pred ---chHHHHHhhc------------cccEEEEEcCC-------ccc----hhHHHHHHHHHhcCccceee---eeecccC Confidence 1111111100 12223333331 111 13566677777777543223 3442 44 Q ss_pred eeeecccccccCChhhhhhhccccceEEEEecCCeEEEecceecCCCCcccceehhhHHHHHHHHHHHHHHHHHhhc--- Q lcl|Aclame:pro 498 QILNVIKLAIETRQAQRDRLYQEAINPVTGTGGDGYVLYGDKTATSVPSPFDRINVRRLFNMVKTNIGSASKYRLFE--- 574 (660) Q Consensus 498 ~v~~~~~~~~~~~~~e~~~Ln~~gin~i~~~~g~G~~~wG~rT~~~~~~~~~~i~vrR~~~~i~~~~~~~~~~~v~e--- 574 (660) ||.. -.++..|++.|..+++|++.++.+.. .++...|++++ ||.+.+-.+||+..|++.+...+-. T Consensus 180 GV~~-----~~lt~t~~~al~~~~~N~y~~~~~~~-~~~~G~~~~G~-----~iD~~~~~dWl~~~lq~~l~~ll~~~~k 248 (331) T protein:vir:80 180 GITS-----EELKVSEIDAIQKAGGMCYIEKAGIA-QTSEGKTVSGE-----FIDSIHGDDWIKATIETRLQKLLTETDK 248 (331) T ss_pred CCCC-----CCCCHHHHHHHHhcCceEEEEecCee-EEecceEeCch-----hHHHHHHHHHHHHHHHHHHHHHHHhCCC Confidence 4431 35789999999999999999987654 46677777662 6899999999999999998875543 Q ss_pred -CCCHHHHHHHHHHHHHHHHHHHhcCCee--------eEEEEEe-cCCCCHHHhhCCEEE-EEEEEEecCcceEEEEEEE Q lcl|Aclame:pro 575 -LNNAFTRSSFRTETSQYLQGIKALGGVY--------NFKVVCD-TTNNTPAVIDRNEFV-ATFYLQPARSINYITLNFV 643 (660) Q Consensus 575 -pn~~~~~~~i~~~i~~~l~~l~~~gal~--------g~~v~~d-~~~nt~~~i~~G~~~-~~i~~~p~~p~e~i~~~~~ 643 (660) |-|+.=...|+..++.-|++-+++|.|. ||.|.+. .++.+++|+.++++. +.+.+.+...+++|.|++. T Consensus 249 iPy~~~G~~~l~a~i~~~~~~av~~G~I~~g~~~~~~~~~v~~~~~~~~s~~dr~~R~~~~~~~~~~~~gaI~~v~i~~~ 328 (331) T protein:vir:80 249 LTFDARGIALLQSELTTVLNEGFANGIIDSNDETGEPNFSITALQRSDLNDDDIAKRNYKGLSFRYKRSGAIHSVDVYGE 328 (331) T ss_pred CccChhhHHHHHHHHHHHHHHHHhCCceecCccCCCcceEEEeCchhcCCHHHHhccCCCCeEEEEEEcceEEEEEEEEE Confidence 4567778899999999999999999996 6888876 467899999999985 8899999999999999988 Q ss_pred Eee Q lcl|Aclame:pro 644 ATA 646 (660) Q Consensus 644 ~~~ 646 (660) .+. T Consensus 329 v~~ 331 (331) T protein:vir:80 329 VEV 331 (331) T ss_pred EeC Confidence 876 No 60 >protein:vir:5260 Length: 502 # NCBI annotation: hypothetical protein # Family: family:all:396 # MgeID: mge:117 # MgeName: Aaphi23 # Cross-refs: genbank:acc:NP_852765;genbank:gi:31544040;uniprot:Q7Y5T5;genbank:GeneID:2753559 Probab=97.52 E-value=5.2e-05 Score=44.06 Aligned_cols=466 Identities=12% Similarity=0.020 Sum_probs=212.5 Q ss_pred CccccC-ceEEEEecCCcccccCCcCceeEEeec-ccCCC---CccEEecCHHHHHHHcCCcCCcchhHHHHHHHHHhcC Q lcl|Aclame:pro 1 MALLSP-GVELKETTVQSTVVNNSTGTAALAGKF-QWGPA---FQIKQITDEVALVDMFGTPNTDTADYFMSAMNFLQYG 75 (660) Q Consensus 1 ~~~~~P-GVyveE~~~~~~i~gv~Ts~~afvG~~-~~Gpv---~~p~~i~s~~e~~~~fG~~~~~~~~~~~v~~~f~ngG 75 (660) |.+=.- =|.|..--.+..+.+..=+...|+|.. ..-|. +.-..-+|..|-...|| ..+.++.+++.+|-+-= T Consensus 1 msip~s~ivnV~i~~~~~a~~~~~f~~~l~l~~~~~~~~~~~~~r~~~~~s~~~V~~~FG---~~s~ey~aA~~yF~q~p 77 (502) T protein:vir:52 1 MALSISHIVNVQLNTVPKSAARKSFGIVALFTPEAGQAFADEKTRYVYVENQRDVEQLFG---TNSETAKAAQPFFAQSP 77 (502) T ss_pred CCCCccceeEEeeccccccccccccCceEEEeeccCccccCCccceEEecCHHHHHHhcC---CChHHHHHHHHHhcCCC Confidence 665432 222321113444444455677888874 33333 33344578899999999 45678888999995422 Q ss_pred C--EEEEEEccCccccccccccccccccccccccccccccceeEEeccccccccccceeeeecCCceeeEEeeccccccc Q lcl|Aclame:pro 76 N--DLRVVRAVDRDTAKNSSPVAGNINFTISSAGTNYRVGDKVVVKYSTDIIEPDGEVTSVDSDGKILNIFIPSGKIIAK 153 (660) Q Consensus 76 ~--~~~vvRv~~~~~~~~a~~~~~~l~~t~~~~g~~~~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 153 (660) . ++||-|-....... ...++.+......... .....+ .+|. +..+..+.. T Consensus 78 ~P~~l~igR~~~~~~~~--~~~~~~~~~~~~~~~~--------------------~~~~~~-~~G~----l~i~i~g~~- 129 (502) T protein:vir:52 78 RAKQLIVARWQKSASTI--EATKNTLSGATLSDDL--------------------ERFKSV-VNGR----FSLTIGGDV- 129 (502) T ss_pred ccceEEEEeccccccce--eechhhhhhhhhHHhH--------------------HHhhhh-cCce----eEEEeccee- Confidence 2 58888865422111 1111111000000000 000000 0000 000000000 Q ss_pred ccccccccccccceeeeeeccccccceeeeecccccccccccccccccccccccceeeeccccccccccccccccccccc Q lcl|Aclame:pro 154 AKEIGEYPELGSNWTAEMSGSSSGLSAVITIDSVVMDSGILLTEVETSEEAITSLTFQESIKKYGVPGVVALYPGELGDQ 233 (660) Q Consensus 154 a~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~g~~g~~ 233 (660) ...... ..+....+.... ...+...+..+.. T Consensus 130 ----------------~t~~~i-~lS~~ts~~~vA--------------------------------~~i~~~l~~~~~~ 160 (502) T protein:vir:52 130 ----------------KKVDGL-SFARLADFNAVA--------------------------------TKIQEKLTTLSVA 160 (502) T ss_pred ----------------eeeecc-ccccccchhHHH--------------------------------HHHHhhhcccccc Confidence 000000 000000000000 0000000000000 Q ss_pred ccccccccccccccceeeeeeccccccccccceeeeeccccCcccceeecccCCcc-cceeEEeeccccccccccccchh Q lcl|Aclame:pro 234 LEIEIVSKADYDKGASAQLKIYPDGGTRYSTAKAIFGYGPQTDDQYAIIVRRNDSV-VQSVVLSTKRGERDIYGSNIFID 312 (660) Q Consensus 234 i~v~i~s~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~-~e~~~v~~~~~~~~~~~~~~~~~ 312 (660) .+++. + .....|.+.....+.. .-.+.....+... +...... T Consensus 161 ~tv~~----d------------------------------~~~~~F~i~s~ttg~~~~~~~~~a~~~~~~---gt~~a~~ 203 (502) T protein:vir:52 161 VSIAY----D------------------------------ETGNRFIVSANVAGEDKKTEIDYAIDEGGE---GEYIGAL 203 (502) T ss_pred eEEEE----e------------------------------cCCceEEEEeccCCCcceeEEEEeecCCcc---hhHHHHH Confidence 00000 0 0000000000000000 0000000000000 0000000 Q ss_pred hhhhcCCceEEEEEecCCCcccceeeeeeccccccccccchhhhhhhhhhhhhhhcCcceeecccccCCchhhHHHHHHH Q lcl|Aclame:pro 313 DFFAKGASNYIFATAQGWPKGFSGVIKLNGGLSSNETVEAGDLMEAWDLFADRESVNAQLFIAGSCAGESLEVASTVQKH 392 (660) Q Consensus 313 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 392 (660) ...........+... ..|.. ......++..+ .....+....-...... .....+ T Consensus 204 l~l~~~~~av~v~~~-------------~~g~~------aet~~~al~a~---~~~~~~w~~~~~a~~~~----~~~~la 257 (502) T protein:vir:52 204 LKLENGQASRKVGKN-------------SVSLK------KETLGEALFNV---AEVNNTWYGFTVAAQLT----DSEVEA 257 (502) T ss_pred hccccccceeeeeee-------------ccccc------ccCHHHHHHHH---HhccCceEEEEEeecCC----hhHHHH Confidence 000000000000000 00111 11112222222 22221111100011111 122345 Q ss_pred HHHHHhhccCeEEEeccccceEEecCCCCcHHHHHHHhhhcccccccccccCcceEEEEechhcccccccccceeechHH Q lcl|Aclame:pro 393 VVAIGDSRQDCLVLCSPPRAAVVGIPVNRAVDNLVDWRTASGTYTDNNFNISSTYAAIDGNYKYQYDKYNDVNRWVPLAA 472 (660) Q Consensus 393 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~p~~~~~d~~~~~~~~~p~s~ 472 (660) +...++..+..|....... ..++.. + .++...-.. .+..|..+.|- +.+ -.+.+ T Consensus 258 ~a~~iea~~~~f~~~~~d~-~~~~~~---~-~~i~~~l~a----------~~~~~t~~~y~------~~~-----~~~~a 311 (502) T protein:vir:52 258 AAKYAQANTKLFGANVIRA-EQIEWS---A-DNIYKKLYD----------AGLDHTLAMFD------KND-----MYPVS 311 (502) T ss_pred HHHHHhhcCcEEEEEecCc-ceeccc---c-chHHHHHHh----------ccCceeEEEec------CCc-----chhHH Confidence 5556666555565432211 112111 1 111111111 11223333332 111 12567 Q ss_pred HHHHHHHHhhccCC-ceecccceeeceeeecccccccCChhhhhhhccccceEEEEecCCeEEEecceecCCCCccccee Q lcl|Aclame:pro 473 DIAGLCARTDNISQ-PWMSPAGYNRGQILNVIKLAIETRQAQRDRLYQEAINPVTGTGGDGYVLYGDKTATSVPSPFDRI 551 (660) Q Consensus 473 ~~AG~~a~~d~~~g-~~~span~~~~~v~~~~~~~~~~~~~e~~~Ln~~gin~i~~~~g~G~~~wG~rT~~~~~~~~~~i 551 (660) .+.|.++.+|-.+- -...-.+|.+.||.. -.++..|.+.|.++++|++.++.+.+ .+...++++++ || T Consensus 312 a~~g~~as~~f~~~~g~iT~~fk~l~GV~~-----~~lt~t~~~al~~~~~N~y~~~~~~~-~~~~G~~~~G~-----~i 380 (502) T protein:vir:52 312 SALARLLSTNFAANNSTLTLKFKQQPTITA-----DEITATEFAKAKRLGINVYTYFDDVA-MIAEGTVIGGK-----FA 380 (502) T ss_pred HHHHHHHhcCCCcCcceeeecccccCCccc-----CcCCHHHHHHHHhcCceEEEEecCee-EEecCeeeCCc-----hh Confidence 77888888874331 123345566666542 35789999999999999999987765 46677777662 67 Q ss_pred hhhHHHHHHHHHHHHHHHHHhhc-----CCCHHHHHHHHHHHHHHHHHHHhcCCee--------------------eEEE Q lcl|Aclame:pro 552 NVRRLFNMVKTNIGSASKYRLFE-----LNNAFTRSSFRTETSQYLQGIKALGGVY--------------------NFKV 606 (660) Q Consensus 552 ~vrR~~~~i~~~~~~~~~~~v~e-----pn~~~~~~~i~~~i~~~l~~l~~~gal~--------------------g~~v 606 (660) -+.+-.+||+..|++.+...++. |-|+.=...|+..|+.-|++-+++|.|. ||.| T Consensus 381 D~~~~~~Wl~~~lq~~l~~~L~~s~~kIPy~~~G~~~l~a~i~~~l~~a~~~G~I~~G~~~~~~~g~~~~~d~~~~gy~v 460 (502) T protein:vir:52 381 DEIVILDWFVDAVQKEVFARLYKSPTKIPLTDKGQAILIAAVEKVCLEGINNGAFAPGKWTGAGFGNLSTGDYLDKGFYV 460 (502) T ss_pred hHHHHHHHHHHHHHHHHHHHHHhcCCCcccChhHHHHHHHHHHHHHHHHHhcCccccccccCcccceeeecccccCceEE Confidence 88899999999999998876653 4577778999999999999999999984 5888 Q ss_pred EEe-cCCCCHHHhhCCEE-EEEEEEEecCcceEEEEEEEEee Q lcl|Aclame:pro 607 VCD-TTNNTPAVIDRNEF-VATFYLQPARSINYITLNFVATA 646 (660) Q Consensus 607 ~~d-~~~nt~~~i~~G~~-~~~i~~~p~~p~e~i~~~~~~~~ 646 (660) ... .++.++.|+.++++ -+.+.+.+...+++|.|.+...+ T Consensus 461 ~~~~~~~~s~~dr~~R~~~~~~~~~~~aGaIh~v~i~~nv~~ 502 (502) T protein:vir:52 461 WAAPMDTLSDSDRQARRATPIQTAVKLAGAIHSSDVIVNYNR 502 (502) T ss_pred EeCchhhCCHHHHHcccCCCeEEEEEECceEEEEEEEEEEeC Confidence 877 56889999999998 89999999999999999988777 No 61 >protein:vir:3165 Length: 426 # NCBI annotation: capsid protein CP67 # Family: family:all:28419 # MgeID: mge:316 # MgeName: PhiCh1 # Cross-refs: genbank:acc:NP_665936;genbank:gi:22091122;genbank:GeneID:951267 Probab=95.12 E-value=0.0027 Score=34.65 Aligned_cols=362 Identities=12% Similarity=0.025 Sum_probs=141.9 Q ss_pred ccccccccccc--ccccc-cccceeeeeeccccccccccceeeeeccccCcccceeecccC--CcccceeEEeecccccc Q lcl|Aclame:pro 229 ELGDQLEIEIV--SKADY-DKGASAQLKIYPDGGTRYSTAKAIFGYGPQTDDQYAIIVRRN--DSVVQSVVLSTKRGERD 303 (660) Q Consensus 229 ~~g~~i~v~i~--s~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~--g~~~e~~~v~~~~~~~~ 303 (660) -+-+-+.+.+. +.+.. ..+... +.+ +.+....+.. .|.-..+.. ..+.+.| ..++ T Consensus 1 m~~~iVnV~Is~~t~A~~~~~Fg~~-lii---gs~~~~~p~~----------~f~~~~~Yss~~~V~~Df----g~~s-- 60 (426) T protein:vir:31 1 MPKQIVEIELTAEIADRPQETFTDA-AIV---GTAEEEPPDA----------EFGEVNQYSTSTSVGDDY----GEDS-- 60 (426) T ss_pred CCcceEEEEeeccccccccccccee-eee---eecccccccc----------ccchhhhhhhHHHHHhcC----CCCh-- Confidence 11122222221 11111 111100 000 0000000000 000000000 0000000 0000 Q ss_pred ccccccchhhhhhcCCceEEEEEecC-----CCcccce---eeeeeccccccccccchhhhhhhhhhhhhhhcCcce--e Q lcl|Aclame:pro 304 IYGSNIFIDDFFAKGASNYIFATAQG-----WPKGFSG---VIKLNGGLSSNETVEAGDLMEAWDLFADRESVNAQL--F 373 (660) Q Consensus 304 ~~~~~~~~~~~~~~g~~~~~~~~~~~-----~~~~~~~---~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 373 (660) ..+.....++..+........... ...++.. .++..+.. +.. -+..++...... ..+...... . T Consensus 61 --~~Y~AA~~~f~Q~~~~~r~~v~~at~~~~~~~t~~~tv~g~~~s~~a-~~~-~~a~~i~~~~~~--~~~~~~~~~~~~ 134 (426) T protein:vir:31 61 --DVYTASEAIEEMGAEQWRVMVLEATEVTEEELSDGDTIDKVPILGNH-EVE-SPDGDIEFTTDD--DPDVEDFDAEIV 134 (426) T ss_pred --HHHHHHHHHHhCCceeEEeeccccceeeeccCCcceeecceeeeecc-cCc-chHHHHHHhhcc--ccccccceeeeE Confidence 011111222222111000000000 0000000 00111100 000 001111111000 000000000 0 Q ss_pred e------------------ccc-----------------ccCCchhhHHHHHHHHHHHHhhccCeEEEeccccceEEecC Q lcl|Aclame:pro 374 I------------------AGS-----------------CAGESLEVASTVQKHVVAIGDSRQDCLVLCSPPRAAVVGIP 418 (660) Q Consensus 374 ~------------------~~~-----------------~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 418 (660) + ... .....+.....+...+..-++.-+ .+.+. ..++.. T Consensus 135 ~~t~~g~~t~~~~~~~~~~s~~dw~~~~~~~s~~~~~~ia~~~~~~~~~~~~~~~~~wa~~~~-i~~va-----~~~e~~ 208 (426) T protein:vir:31 135 INSATGDVATSEDSIELTYFHADWSQLDEFPSDVNNFAVADRRFDLKGVGVLDETHSWASDED-MGMIA-----NGVNVD 208 (426) T ss_pred eccccceeeccccceeeeeccCcchhhhcccccchhhhhhccccchhhhhhhHhhhhhhhhcc-eeeee-----eccchh Confidence 0 000 000000000011111111110000 00000 000000 Q ss_pred CCCcHHHHHHHhhhcccccccccccCcceEEEEechhcccccccccceee-chHHHHHHHHHHhhccCCceecccceeec Q lcl|Aclame:pro 419 VNRAVDNLVDWRTASGTYTDNNFNISSTYAAIDGNYKYQYDKYNDVNRWV-PLAADIAGLCARTDNISQPWMSPAGYNRG 497 (660) Q Consensus 419 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~p~~~~~d~~~~~~~~~-p~s~~~AG~~a~~d~~~g~~~span~~~~ 497 (660) .-...+....++.. ..-|.|-..+.... ...- -..+++++.++..+ ||..|.=+... T Consensus 209 ~~~~~~~~~a~~~~---------------~~~y~p~~~~~~~~---~~~~~~~~~~~~~~~aa~~----~~~~~~~~~~~ 266 (426) T protein:vir:31 209 DYDSVDEAMDVAHE---------------VAGYVPSGDLMMIV---DASDDDLAAYQLGKFAVSE----PWYNPLWNELP 266 (426) T ss_pred hhcchhhhhhhhhc---------------ccccccchhheeeh---hccccchhhHHhhhhhhhc----cccchhhhhcc Confidence 00011111222111 11122221110000 0000 12467788888776 45555322221 Q ss_pred eeeec------ccccccCChhhhhhhccccceEEEEecCCeEEEecceecCCCCcccceehhhHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 498 QILNV------IKLAIETRQAQRDRLYQEAINPVTGTGGDGYVLYGDKTATSVPSPFDRINVRRLFNMVKTNIGSASKYR 571 (660) Q Consensus 498 ~v~~~------~~~~~~~~~~e~~~Ln~~gin~i~~~~g~G~~~wG~rT~~~~~~~~~~i~vrR~~~~i~~~~~~~~~~~ 571 (660) +...+ .+..-.+...++..++ +..|.+..+.+ +..+|-.-|..+....-.||-++|..+||++.++..++.. T Consensus 267 ~~~~~~~~~~~~gv~~t~~~~~~A~~~-~~~n~~~~~~~-~~~i~~~~~~~G~~~~G~~iD~~~g~dwl~~~iq~~l~~l 344 (426) T protein:vir:31 267 AGETVSKNVGDPEEQGTFEGGDEAEGE-GPVNVLIDVSD-ANRVSNAVTTAGADSDTSFFDIRRTKVYTAEMLELDLESL 344 (426) T ss_pred ccccceeeccccccccccchhhhhhhc-CCceEEEEecC-ceeeecceeecccccchhhhhhHHHHHHHHHHHHHHHHHH Confidence 11111 1112222233445565 77799998875 5677766676666566779999999999999999999876 Q ss_pred hh---c-CCCHHHHHHHHHHHHHHHHHHHhcCC--eeeEEEEEecCCCCHHHhhCCEEE-EEEEEEecCcceEEEEEEEE Q lcl|Aclame:pro 572 LF---E-LNNAFTRSSFRTETSQYLQGIKALGG--VYNFKVVCDTTNNTPAVIDRNEFV-ATFYLQPARSINYITLNFVA 644 (660) Q Consensus 572 v~---e-pn~~~~~~~i~~~i~~~l~~l~~~ga--l~g~~v~~d~~~nt~~~i~~G~~~-~~i~~~p~~p~e~i~~~~~~ 644 (660) .= + |-|..=...|+..|+.=|+...+.|. +.+|.|...+...++.|..+-++. +++.......++++.|+... T Consensus 345 l~~~~KIpyt~~Gi~~I~~~i~~~L~~~v~~~g~~~~~y~v~~P~~~~~~~dra~R~~~~i~~~~~laGAIh~v~I~g~v 424 (426) T protein:vir:31 345 QVSDDDVPFTEDGQAMIEDAIKGTMSGLTGSVGQPLAEYEVDVPEWDDDDVDRVNRNWGGIDLDARLAQRAHTFSLGLNV 424 (426) T ss_pred hhcCCCCccchhHHHHHHHHHHHHHHHHhcCCCccccceeecCCCccccchhhhhhccCCceEEEEEeCcEEEEEEEEEE Confidence 53 2 67888889999999999999998654 567998876555566788887775 89999999999999999887 Q ss_pred ee Q lcl|Aclame:pro 645 TA 646 (660) Q Consensus 645 ~~ 646 (660) +- T Consensus 425 ~v 426 (426) T protein:vir:31 425 SV 426 (426) T ss_pred eC Confidence 66 No 62 >protein:vir:101576 Length: 501 # NCBI annotation: gp04 # Family: family:all:396 # MgeID: mge:1477 # MgeName: Bcep43 # Cross-refs: genbank:acc:NP_958108;genbank:gi:41057654;genbank:GeneID:2716834 Probab=91.95 E-value=0.014 Score=30.83 Aligned_cols=430 Identities=10% Similarity=0.038 Sum_probs=144.2 Q ss_pred eecccccccccccccccccccceeeeeeccccccceeeeeccc-ccccccccc----cccccccccccceeeeccccccc Q lcl|Aclame:pro 145 IPSGKIIAKAKEIGEYPELGSNWTAEMSGSSSGLSAVITIDSV-VMDSGILLT----EVETSEEAITSLTFQESIKKYGV 219 (660) Q Consensus 145 ~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~-~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~ 219 (660) +|... .--...+...+.+ . +.+.. ...+.+. +......+. ....... +... +-.....+.. T Consensus 1 m~~~~-ip~s~iV~V~~~v--------~--~~~~~-~~~~~~l~l~~~~~~~~~~~~~~~s~~~-V~~~-FG~~S~ey~a 66 (501) T protein:vir:10 1 MPTTT-IPIDQIVQMLPGV--------I--GAGGA-PGRLTGLVLTQDTSVQPGQLADFFQETD-VENW-FGALSNEAKI 66 (501) T ss_pred CCCCC-cccceEEEEeeec--------c--cCCCc-cccceeEEEeccCCCCccceEEecCHHH-HHHh-cCCChHHHHH Confidence 11000 0000000000000 0 00000 0000000 000000000 0000000 0000 0000000000 Q ss_pred cccccc---ccccccccccccccccccccccceeeeeeccccccccccceeeeeccccCcccceeecccCCcccceeEEe Q lcl|Aclame:pro 220 PGVVAL---YPGELGDQLEIEIVSKADYDKGASAQLKIYPDGGTRYSTAKAIFGYGPQTDDQYAIIVRRNDSVVQSVVLS 296 (660) Q Consensus 220 ~~~~a~---~~g~~g~~i~v~i~s~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~e~~~v~ 296 (660) ...+-. +.......+-+. .......... ..+..... ......... . ..+.+..++.. ....+. T Consensus 67 A~~yFsg~~~q~p~P~~l~ig--R~~~~~~~~~------l~g~~l~~--~~la~~~~~-s--g~l~vti~g~~-~~~~i~ 132 (501) T protein:vir:10 67 ADAYFPGIVNGGQLPYDLKFA--RYVAADAPAS------VYGIPLTG--VTLAQLQGY-S--GTLTVTTAAQH-VSANIS 132 (501) T ss_pred HHHHhhhhcCCCccccEEEEE--eecCCCccce------Eeccchhh--hhhhhccee-e--eEEEEeeccce-eecccc Confidence 000000 000000000000 0000000000 00000000 000000000 0 00111111110 000000 Q ss_pred eccccccccccccchhhhh---------hcCCceEEEEEecCC----------Ccccceeeeeecccccc---ccccchh Q lcl|Aclame:pro 297 TKRGERDIYGSNIFIDDFF---------AKGASNYIFATAQGW----------PKGFSGVIKLNGGLSSN---ETVEAGD 354 (660) Q Consensus 297 ~~~~~~~~~~~~~~~~~~~---------~~g~~~~~~~~~~~~----------~~~~~~~~~~~gg~~~~---~~~~~~~ 354 (660) .. ...........+.... .......++...... ..+.+..+.|..+.-.. .+..... T Consensus 133 ls-~ats~~~vAs~i~~al~~~~~tv~~d~~~~~f~its~ttG~~~~i~~~~~~~~la~~l~Lt~~~~a~v~~~g~~aet 211 (501) T protein:vir:10 133 LA-AATSFANAATLIEAAFTSPDFVVAYDALRNRFTVVTNATGTAAAISAVTGTNNLADELGLSAAAGATLQAAGVAADT 211 (501) T ss_pred cc-cccCHHHHHHHHhhhccCCceEEEEcccCceEEEEeeccCCceeEEEeeCchhhhhhcCccccccceEEecCccccc Confidence 00 0000000000000000 000011111111100 00011111111100000 0000011 Q ss_pred hhhhhhhhhhhhhcCcceeecccccCCchhhHHHHHHHHHHHHhhccCeEEEeccccceEEecCCC---CcHHHHHHHhh Q lcl|Aclame:pro 355 LMEAWDLFADRESVNAQLFIAGSCAGESLEVASTVQKHVVAIGDSRQDCLVLCSPPRAAVVGIPVN---RAVDNLVDWRT 431 (660) Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~ 431 (660) .. +.+........+.........+.. .-..++.+.++....+|.++.. +.... ...+.-+..+. T Consensus 212 ~~---~a~~a~~~~~~~Wy~f~~a~~~~~----~~~la~A~wiea~~~~f~~~~~------~~~~~~~~~~~~~~i~~~l 278 (501) T protein:vir:10 212 PA---SAMNRAVGLSRNWATFTTAWTAVI----ADRLAFAAWNSGQAYKYMYVAP------DLEAASIVTNNAASFGAQV 278 (501) T ss_pred HH---HHHHHHHhccCceEEEEEecCCCh----HHHHHHHHHHHhcCceEEEEEe------cCchhhhhhhhhhhHHHHH Confidence 11 122222222222211111111111 1223344445544434332211 00000 00000000000 Q ss_pred hcccccccccccCcceEEEEechhcccccccccceeechHHHHHHHHHHhhccCCc-eecccceeec-eeeecccccccC Q lcl|Aclame:pro 432 ASGTYTDNNFNISSTYAAIDGNYKYQYDKYNDVNRWVPLAADIAGLCARTDNISQP-WMSPAGYNRG-QILNVIKLAIET 509 (660) Q Consensus 432 ~~~~~~~~~~~~~s~~~~~~~p~~~~~d~~~~~~~~~p~s~~~AG~~a~~d~~~g~-~~span~~~~-~v~~~~~~~~~~ 509 (660) . ..+..+....|+. ..+.+.+.|.++.+|-++-. -..-.+|.+. |+. .-.+ T Consensus 279 ~---------~~~y~~t~~~y~~-------------~~~~aa~~g~~as~nf~~~~g~~T~~fkq~~~Gi~-----a~~l 331 (501) T protein:vir:10 279 F---------AAPYQGTLPLYGD-------------QATAGAVMGYAASINFQLRNGRTVLAFRQFNAGVP-----ATAH 331 (501) T ss_pred H---------hcCCCceEEECCC-------------CcHHHHHHHHHHhhCcccCccceeeeccccCCCcC-----cccC Confidence 0 0112234444431 12456778888888754311 1111233321 221 1347 Q ss_pred ChhhhhhhccccceEEEEecCC--eEEEecceecCCCCcccceehhhHHHHHHHHHHHHHHHHHhhc----CCCHHHHHH Q lcl|Aclame:pro 510 RQAQRDRLYQEAINPVTGTGGD--GYVLYGDKTATSVPSPFDRINVRRLFNMVKTNIGSASKYRLFE----LNNAFTRSS 583 (660) Q Consensus 510 ~~~e~~~Ln~~gin~i~~~~g~--G~~~wG~rT~~~~~~~~~~i~vrR~~~~i~~~~~~~~~~~v~e----pn~~~~~~~ 583 (660) +..|.+.|..+++|+...+.+. -+.+|-.-+++++ |.+|.+-+-.+|++..++..+....-. |-|..=... T Consensus 332 t~t~a~al~~~~~N~y~~~~~~~~~~~~~~~G~~sG~---~~wiD~~~~~~Wl~~~iq~~l~~ll~~~~kIPyt~~G~~~ 408 (501) T protein:vir:10 332 DLPTANALRSNNYTYIGAYANAANNYTIAYDGKLSGK---FLWVDTYLDQIYLNAELQRAEFEAMLAYNSLPYNEDGYTA 408 (501) T ss_pred CHHHHHHHHhcCCeEEEEeccccceeeEEecCeeecc---ceeehhhhhHHHHHHHHHHHHHHHHHhcCCcccCHHHHHH Confidence 8899999999999999988654 4678855566654 566887777788888888888764433 567888889 Q ss_pred HHHHHHHHHHHHHhcCCee-----------------------------eEEEEEecCCCCHHHhh-CCEEEEEEEEEecC Q lcl|Aclame:pro 584 FRTETSQYLQGIKALGGVY-----------------------------NFKVVCDTTNNTPAVID-RNEFVATFYLQPAR 633 (660) Q Consensus 584 i~~~i~~~l~~l~~~gal~-----------------------------g~~v~~d~~~nt~~~i~-~G~~~~~i~~~p~~ 633 (660) |+..|+.-|+.-+++|.|. ||.+.++....++++.. .....+.+.+.--. T Consensus 409 l~a~v~~~l~~av~nG~I~~Gv~l~~~q~~~i~~~~g~~~~~~~v~~~Gyy~~~~~~~~~~~~R~~R~~p~~~~~y~~~g 488 (501) T protein:vir:10 409 LYRAGVDVIDAAVTSGIIRAGVTLTNSQLQQIDAAAGVAGAGQLVQTRGWYFLIGDPANPGQARQNRTTPACTLWYSDGG 488 (501) T ss_pred HHHHHHHHHHHHHhCceeecCCCCCcccceeeccccCccccccceeccceeEeeccccCChhhhhhccccceEEEEEeCC Confidence 9999999999999999883 36666665434444433 34457777777777 Q ss_pred cceEEEEEEEEee Q lcl|Aclame:pro 634 SINYITLNFVATA 646 (660) Q Consensus 634 p~e~i~~~~~~~~ 646 (660) .+++|.+-..--. T Consensus 489 aIh~v~i~s~~v~ 501 (501) T protein:vir:10 489 SIQQLTIGSNAVI 501 (501) T ss_pred ceeEEEeeeeecC Confidence 8888766433323 No 63 >protein:vir:106730 Length: 501 # NCBI annotation: gp04 # Family: family:all:396 # MgeID: mge:1599 # MgeName: Bcep1 # Cross-refs: genbank:acc:NP_944312;genbank:gi:38638611;genbank:GeneID:2657359 Probab=85.82 E-value=0.05 Score=27.72 Aligned_cols=425 Identities=10% Similarity=0.026 Sum_probs=146.0 Q ss_pred eecccccccccccccccccccceeeeeeccccccceeeeeccc-ccccccccccccccccccccceeeecc--------- Q lcl|Aclame:pro 145 IPSGKIIAKAKEIGEYPELGSNWTAEMSGSSSGLSAVITIDSV-VMDSGILLTEVETSEEAITSLTFQESI--------- 214 (660) Q Consensus 145 ~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~--------- 214 (660) ++.... --...+...+.+ . ..+.. ...+.+. +......+.+ .-..|.... T Consensus 1 m~~~~i-p~s~iV~V~~~v--------~--~~~~~-~~~f~~lll~~~~~~~~~--------r~~~y~s~~~V~~~FG~~ 60 (501) T protein:vir:10 1 MPTTTI-PIDQIVQMLPGV--------I--GAGGA-PGRLTGLVLTQDTSVQPG--------QLADFFQKTDVENWFGAL 60 (501) T ss_pred CCcCcc-ccceEEEEeeec--------c--cCCCc-ccccceEEEecccCCCcc--------ceeeecCHHHHHHhcCCC Confidence 110000 000000000000 0 00000 0000000 0000000000 000010000 Q ss_pred -ccccccccccc---ccccccccccccccccccccccceeeeeeccccccccccceeeeeccccCcccceeecccCCccc Q lcl|Aclame:pro 215 -KKYGVPGVVAL---YPGELGDQLEIEIVSKADYDKGASAQLKIYPDGGTRYSTAKAIFGYGPQTDDQYAIIVRRNDSVV 290 (660) Q Consensus 215 -~~~~~~~~~a~---~~g~~g~~i~v~i~s~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~ 290 (660) ..+.....+-. +.......+-+.--.... .... ..+.+... ....... ..+ .++.+..++.. T Consensus 61 S~ey~aA~~yFsg~~~q~p~P~~l~igR~~~~~--~~~~------l~g~~l~~--~~la~~~-~~~--g~l~i~i~g~~- 126 (501) T protein:vir:10 61 SNEAKIADAYFPGIVNGGQLPYDLKFARYVAAD--APAS------VYGIPLTG--ITLAQLQ-GYS--GTLTVTTAAQH- 126 (501) T ss_pred hHHHHHHHHHhhhhcCCCccccEEEEEeecccC--ccce------eeeceehh--hhhhhhh-hee--eEEEEeeccce- Confidence 00000000000 000000000000000000 0000 00000000 0000000 000 01111111110 Q ss_pred ceeEEeeccccccccccccchhhhhhc---------CCceEEEEEecC----------CCcccceeeeeecccccc---c Q lcl|Aclame:pro 291 QSVVLSTKRGERDIYGSNIFIDDFFAK---------GASNYIFATAQG----------WPKGFSGVIKLNGGLSSN---E 348 (660) Q Consensus 291 e~~~v~~~~~~~~~~~~~~~~~~~~~~---------g~~~~~~~~~~~----------~~~~~~~~~~~~gg~~~~---~ 348 (660) ....+... ...........+...+.. .....++..... .+.+.+..+.+..+.-.. . T Consensus 127 ~~~~i~~s-~ats~~~vA~~i~~al~~~~~tv~~d~~~~~f~i~~~t~G~~~~i~~~t~~~d~a~~l~Lt~~~~a~v~~~ 205 (501) T protein:vir:10 127 VSANISLA-AATSFANAATLIEAAFTSPDFVVAYDALRNRFTVVTNTTGTAAAISAVTGTNNLADELGLSAAAGATLQAA 205 (501) T ss_pred eeeccccc-cccCHHHHHHHHHHhhcCCceEEEEecccceEEEEecccCcceeEEEeeccccchhhhcccccCceeEEec Confidence 00000000 000000000000000000 000111110000 000111111111100000 0 Q ss_pred cccchhhhhhhhhhhhhhhcCcceeecccccCCchhhHHHHHHHHHHHHhhccCeEEEe--ccccceEEecCCCCcHHHH Q lcl|Aclame:pro 349 TVEAGDLMEAWDLFADRESVNAQLFIAGSCAGESLEVASTVQKHVVAIGDSRQDCLVLC--SPPRAAVVGIPVNRAVDNL 426 (660) Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 426 (660) +....... +.+........+.........+.. .-..++...++....+|.++ +.. ...++... +.- T Consensus 206 g~~aet~~---~Al~a~~~~~~~Wy~f~~a~~~~~----~~~la~A~wi~a~~~~f~~~~~~~~-~~~~~~~~----~~~ 273 (501) T protein:vir:10 206 GVAADTPA---SAMNRAVGLSRNWATFTTAWTAVI----ADRLAFAAWNSGQAYKYMYVAPDLE-AASIVTNN----AAS 273 (501) T ss_pred CcccccHH---HHHHHHHhcccceEEEEEEecCCh----HHHHHHHHHHHhcCceEEEEEecCc-ceeeeccc----chh Confidence 00000111 122222222222211111111111 12233444444444333222 111 01111110 010 Q ss_pred HHHhhhcccccccccccCcceEEEEechhcccccccccceeechHHHHHHHHHHhhccCCc-eecccceee-ceeeeccc Q lcl|Aclame:pro 427 VDWRTASGTYTDNNFNISSTYAAIDGNYKYQYDKYNDVNRWVPLAADIAGLCARTDNISQP-WMSPAGYNR-GQILNVIK 504 (660) Q Consensus 427 ~~~~~~~~~~~~~~~~~~s~~~~~~~p~~~~~d~~~~~~~~~p~s~~~AG~~a~~d~~~g~-~~span~~~-~~v~~~~~ 504 (660) +..+-. . -+..+....|+. -.|.+++.|.++.+|-++-. -..-.+|.+ .|+. T Consensus 274 i~~~l~-------~--~~y~~t~~~y~~-------------~~~~aa~~g~~as~nf~~~~g~~T~~fkql~~Gv~---- 327 (501) T protein:vir:10 274 FGAQVF-------A--APYQGTLPLYGD-------------QATAGAVMGYAASINFQLRNGRTVLAFRQFNAGVP---- 327 (501) T ss_pred HHHHHH-------h--cCCCceEEECCC-------------CCHHHHHHHHHHhcCcccCcceeeeeecccCCCcC---- Confidence 100000 0 012233333321 23567888888888754311 111123332 2221 Q ss_pred ccccCChhhhhhhccccceEEEEecCCe--EEEecceecCCCCcccceehhhHHHHHHHHHHHHHHHHHhhc----CCCH Q lcl|Aclame:pro 505 LAIETRQAQRDRLYQEAINPVTGTGGDG--YVLYGDKTATSVPSPFDRINVRRLFNMVKTNIGSASKYRLFE----LNNA 578 (660) Q Consensus 505 ~~~~~~~~e~~~Ln~~gin~i~~~~g~G--~~~wG~rT~~~~~~~~~~i~vrR~~~~i~~~~~~~~~~~v~e----pn~~ 578 (660) .-.++..|.+.|..+|+|++..|.+.+ +.+|-.-+++++ |.+|.+-+-.+|++..|+..+....-. |-|. T Consensus 328 -a~~l~~t~a~al~~~~~N~y~~~~~~~~~~~~~~~G~~sG~---~~wiD~~~g~dWl~~~iq~~l~~ll~~~~kIPyt~ 403 (501) T protein:vir:10 328 -ATAHDLPTANALRSNNYTYIGAYANAANNYTIAYDGKLSGK---FLWVDTYLDQIYLNAELQRAEFEAMLAYNSLPYNE 403 (501) T ss_pred -cccCCHHHHHHHHhcCCeEEEEEecccceeeEEEcceeecc---ceehhhHhhHHHHHHHHHHHHHHHHhcCCCcccCH Confidence 134788999999999999998887544 778755556664 567888888999999999998875433 4567 Q ss_pred HHHHHHHHHHHHHHHHHHhcCCee-----------------------------eEEEEEecCCCCHHH-hhCCEEEEEEE Q lcl|Aclame:pro 579 FTRSSFRTETSQYLQGIKALGGVY-----------------------------NFKVVCDTTNNTPAV-IDRNEFVATFY 628 (660) Q Consensus 579 ~~~~~i~~~i~~~l~~l~~~gal~-----------------------------g~~v~~d~~~nt~~~-i~~G~~~~~i~ 628 (660) .=...|+..|+.-|+.-+++|.|. ||.+.++....++++ .......+.+. T Consensus 404 ~G~~~l~a~i~~~l~~av~nG~Ia~Gv~l~~~q~~~i~~~~g~~~~~~~v~~~Gyy~~~~~~~~~~~~R~~R~~p~~~~~ 483 (501) T protein:vir:10 404 DGYTANYRAGVDVIDAAVTSGIIRAGVTLTNSQLQQIDAVAGVAGAGALVQTRGWYFLIGNPANPGQARQNRTSPACTLW 483 (501) T ss_pred HHHHHHHHHHHHHHHHHHhCcceecCcccCcccceeecccccccccccceeccceEEeeCcccCChhhhhhcccCceEEE Confidence 888899999999999999999883 366666654334333 33344577777 Q ss_pred EEecCcceEEEEEEEEee Q lcl|Aclame:pro 629 LQPARSINYITLNFVATA 646 (660) Q Consensus 629 ~~p~~p~e~i~~~~~~~~ 646 (660) +.--..+++|.+-..--. T Consensus 484 y~~~gaIh~v~i~s~~v~ 501 (501) T protein:vir:10 484 YSDGGSIQELTIGSNAVI 501 (501) T ss_pred EEeCCceeEEEeeeeecC Confidence 777788888876433333 No 64 >protein:vir:3636 Length: 501 # NCBI annotation: gp04 # Family: family:all:396 # MgeID: mge:75 # MgeName: Bcep781 # Cross-refs: genbank:acc:NP_705631;genbank:gi:23752316;genbank:GeneID:955753 Probab=84.53 E-value=0.06 Score=27.29 Aligned_cols=424 Identities=10% Similarity=0.028 Sum_probs=146.9 Q ss_pred eecccccccccccccccccccceeeeeeccccccceeeeeccc-ccccccccccccccccccccceeeeccc-------- Q lcl|Aclame:pro 145 IPSGKIIAKAKEIGEYPELGSNWTAEMSGSSSGLSAVITIDSV-VMDSGILLTEVETSEEAITSLTFQESIK-------- 215 (660) Q Consensus 145 ~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------- 215 (660) ++.... .....+-+.+ +..+.......+.+. +......+.+ .-..|..... T Consensus 1 m~~~~i-----------p~s~iV~V~~-~v~~~~~~~~~~~~lllt~~~~~~~~--------r~~~y~s~~~V~~~FG~~ 60 (501) T protein:vir:36 1 MPTTTI-----------PIDQIVQMLP-GVIGAGGAPGRLTGLVLTQDTSVQPG--------QLADFFQETDVENWFGAL 60 (501) T ss_pred CCcCCc-----------ccceEEEEee-eeccCCCcceeeeeEEEeccCCCCCc--------ceeeecCHHHHHHhcCCC Confidence 110000 0000000000 000000000001000 0000000000 0000100000 Q ss_pred --cccccccccc---ccccccccccccccccccccccceeeeeeccccccccccceeeeeccccCcccceeecccCCccc Q lcl|Aclame:pro 216 --KYGVPGVVAL---YPGELGDQLEIEIVSKADYDKGASAQLKIYPDGGTRYSTAKAIFGYGPQTDDQYAIIVRRNDSVV 290 (660) Q Consensus 216 --~~~~~~~~a~---~~g~~g~~i~v~i~s~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~ 290 (660) .+.....+-. +.......+.+.--.... .. ....+.+.... ....... .+. ++.+..++... T Consensus 61 S~ey~aA~~yFs~~~~q~~~P~~l~igR~~~~a--~~------~~l~g~~l~~~--~~a~~~~-~sg--~l~vti~g~~~ 127 (501) T protein:vir:36 61 SNEAKIADAYFPGIVNGGQLPYDLKFARYVAAD--AP------ASVYGIPLTGV--TLAQLQG-YSG--TLTVTTAAQHV 127 (501) T ss_pred hHHHHHHHHHhhcccCCCccccEEEEEeecCcC--cc------eeEeccchhhh--hhhhccc-eeE--EEEEEecceee Confidence 0000000000 000000000000000000 00 00000000000 0000000 000 11111122100 Q ss_pred -ceeEEeeccccccccccccchhhhh---------hcCCceEEEEEecCCC----------cccceeeeeecccccc--- Q lcl|Aclame:pro 291 -QSVVLSTKRGERDIYGSNIFIDDFF---------AKGASNYIFATAQGWP----------KGFSGVIKLNGGLSSN--- 347 (660) Q Consensus 291 -e~~~v~~~~~~~~~~~~~~~~~~~~---------~~g~~~~~~~~~~~~~----------~~~~~~~~~~gg~~~~--- 347 (660) ....++... ........+.... .......++....... .+.+..+.+..+.-.. T Consensus 128 ~~~i~lS~~t---s~~~vA~~i~~al~~~~~tv~~d~~~~~f~i~s~t~G~~~~i~~~t~~~~ia~~l~Lt~~~~a~v~~ 204 (501) T protein:vir:36 128 SANISLAAAT---SFANAATLIEAAFTSPDFVVAYDALRNRFTVVTNATGTAAAISAVTGTNNFADEIGLSAAAGATLQA 204 (501) T ss_pred eeeccccccc---CHHHHHHHHhhhhcCcceEEEEcCcceeEEEEeccCCcceeeEeeecccchhhhhcccccCcceEEe Confidence 000011000 0000000000000 0000111111111000 0000001111000000 Q ss_pred ccccchhhhhhhhhhhhhhhcCcceeecccccCCchhhHHHHHHHHHHHHhhccCeEEEeccccc-eEEecCCCCcHHHH Q lcl|Aclame:pro 348 ETVEAGDLMEAWDLFADRESVNAQLFIAGSCAGESLEVASTVQKHVVAIGDSRQDCLVLCSPPRA-AVVGIPVNRAVDNL 426 (660) Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 426 (660) ......... +.+........+...... +.+.. ..-..++...++....+|.++..-.. ..++. ....++ T Consensus 205 ~g~~~et~~---~al~a~~~~s~~Wy~f~~--a~~~~--~~~~la~A~wiea~~~~f~~~~~~~~~~~~~~---~~~~~i 274 (501) T protein:vir:36 205 AGVAADTPA---SAMNRAVGLSRNWATFTT--AWTAV--IADRLAFASWNSGQAYKYMYVAPDLEAASIVS---NNAASF 274 (501) T ss_pred cccccccHH---HHHHHHHhccCceEEEEE--ecCCC--hHHHHHHHHHHhhcCceEEEEEecCchhhhhc---cchhhH Confidence 000000011 122222222222211000 11111 11123344444544444333211000 00000 000001 Q ss_pred HHHhhhcccccccccccCcceEEEEechhcccccccccceeechHHHHHHHHHHhhccC--Cceecccceee-ceeeecc Q lcl|Aclame:pro 427 VDWRTASGTYTDNNFNISSTYAAIDGNYKYQYDKYNDVNRWVPLAADIAGLCARTDNIS--QPWMSPAGYNR-GQILNVI 503 (660) Q Consensus 427 ~~~~~~~~~~~~~~~~~~s~~~~~~~p~~~~~d~~~~~~~~~p~s~~~AG~~a~~d~~~--g~~~span~~~-~~v~~~~ 503 (660) ...... .+..|....|.. ..+.+++.|..|.+|-++ | -..-.+|.+ .|+. T Consensus 275 ~~~l~~----------~~y~~t~~~y~~-------------~~~~aa~~g~~as~nf~~~~g-~~T~~fkq~~~Gi~--- 327 (501) T protein:vir:36 275 GAQVFA----------APYQGTLPLYGD-------------QATAGAVMGYAASINFQLRNG-RTVLAFRQFNAGVP--- 327 (501) T ss_pred HHHHHh----------cCCCcEEEEcCC-------------CCHHHHHHHHHHhcCcccCcc-eeeeeccccCCCcC--- Confidence 011000 112233332210 134567778888887443 2 111123332 1221 Q ss_pred cccccCChhhhhhhccccceEEEEecC--CeEEEecceecCCCCcccceehhhHHHHHHHHHHHHHHHHHhhc----CCC Q lcl|Aclame:pro 504 KLAIETRQAQRDRLYQEAINPVTGTGG--DGYVLYGDKTATSVPSPFDRINVRRLFNMVKTNIGSASKYRLFE----LNN 577 (660) Q Consensus 504 ~~~~~~~~~e~~~Ln~~gin~i~~~~g--~G~~~wG~rT~~~~~~~~~~i~vrR~~~~i~~~~~~~~~~~v~e----pn~ 577 (660) .-.++..|.+.|..+|+|++..|.+ ..+.+|-.-+++++ |.||.+-+-.+||+..|+..+....-. |-| T Consensus 328 --a~~l~~t~a~al~~~~~N~y~~~~~~~~~~~~~~~G~~sG~---~~wiD~~~g~dWL~~~iq~~l~~ll~~~~KIPyt 402 (501) T protein:vir:36 328 --ATVHDLPTANALRSNNYTYIGAYANAANNYTIAYDGKLSGK---FLWVDTYLDQIYLNAELQRAEFEAMLAYNSLPYN 402 (501) T ss_pred --cCcCCHHHHHHHHhcCCcEEEEEecccceeeEEEcCeeecc---chhhhHHHhHHHHHHHHHHHHHHHHhcCCCCccC Confidence 1347789999999999999887764 34777766666664 567888899999999999999876544 557 Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCee-----------------------------eEEEEEecCCCCHHHhh-CCEEEEEE Q lcl|Aclame:pro 578 AFTRSSFRTETSQYLQGIKALGGVY-----------------------------NFKVVCDTTNNTPAVID-RNEFVATF 627 (660) Q Consensus 578 ~~~~~~i~~~i~~~l~~l~~~gal~-----------------------------g~~v~~d~~~nt~~~i~-~G~~~~~i 627 (660) ..=...|+..|+.-|++-+++|.|. ||.+.++....++++.. .....+.+ T Consensus 403 d~G~~~l~a~i~~~l~~av~nG~I~~Gv~~~~~q~~~I~~~~g~~~~~~~v~~~Gyy~~~~~~~~~~~~R~~R~~p~~~~ 482 (501) T protein:vir:36 403 EDGYTGLYRAGVDVIDAAVTSGIIRAGVTLTNSQLQQIDKAARVAGAGQLVQTRGWYFLIGDPANPGQARQNRTTPACTL 482 (501) T ss_pred hhhHHHHHHHHHHHHHHHHhCceeecCCCCCcccceeecccccccccccceeccceEEeeCcccCChhhhhhcccCcEEE Confidence 7778899999999999999999883 36676665444444443 34457777 Q ss_pred EEEecCcceEEEEEEEEee Q lcl|Aclame:pro 628 YLQPARSINYITLNFVATA 646 (660) Q Consensus 628 ~~~p~~p~e~i~~~~~~~~ 646 (660) .+.--..+++|.+-..--. T Consensus 483 ~y~~~gaIh~v~i~s~~v~ 501 (501) T protein:vir:36 483 WYSDGGSIQSLTIGSNAVI 501 (501) T ss_pred EEEeCCceeEEEeeeeeeC Confidence 7788888888876433333 No 65 >protein:vir:99586 Length: 507 # NCBI annotation: hypothetical protein # Family: family:all:396 # MgeID: mge:1544 # MgeName: BcepF1 # Cross-refs: genbank:acc:YP_001039795;genbank:gi:126011045;genbank:GeneID:4818281 Probab=84.07 E-value=0.063 Score=27.15 Aligned_cols=421 Identities=9% Similarity=-0.007 Sum_probs=140.1 Q ss_pred Eeecccccccccccccccccccceeeeeeccccccceeeeecccccccccccccccccccccccceeeecccccc-c--- Q lcl|Aclame:pro 144 FIPSGKIIAKAKEIGEYPELGSNWTAEMSGSSSGLSAVITIDSVVMDSGILLTEVETSEEAITSLTFQESIKKYG-V--- 219 (660) Q Consensus 144 ~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--- 219 (660) ..+.. ..+...+++....... .......+...........-..|........ + T Consensus 1 mip~s---------------------~iVnV~~~v~~~a~~~--~~~~~~lilt~~~~~~~~r~~~y~s~~~V~~~FG~~ 57 (507) T protein:vir:99 1 MISQS---------------------RYVRIVSGVGAGAPVA--QRRLIMRVMTTNAVLPPGVVFESSSADAVGAYFGMA 57 (507) T ss_pred CCCcc---------------------ceeEEeeeccccCccc--ccccceeeeccccCCCccceEeecCHHHHHHhcCCC Confidence 00100 0111000000000000 0000000000000000000000100000000 0 Q ss_pred ---ccccccccccccccccccccccccccccceeeeeeccccccccccceeeee---------ccccCcccceeecccCC Q lcl|Aclame:pro 220 ---PGVVALYPGELGDQLEIEIVSKADYDKGASAQLKIYPDGGTRYSTAKAIFG---------YGPQTDDQYAIIVRRND 287 (660) Q Consensus 220 ---~~~~a~~~g~~g~~i~v~i~s~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~v~~~g 287 (660) ......+.....+... ....+-.... .+......... .....+. ++.+..+| T Consensus 58 S~ey~aA~~yFsq~p~~~~---------~P~~L~igR~-----~~~~~~a~l~g~~~~~~l~~~~~~~~G--~lti~v~G 121 (507) T protein:vir:99 58 SEEYKRAKAYMSFISKSIN---------SPSYISFARW-----VNAAIASMIVGDSLVKNLPALKAVATP--TLSLSIGG 121 (507) T ss_pred hHHHHHHHHHhccCCCCCc---------ccceEEEEee-----cCccccceeecchhhhhHHHHhhhcce--eEEEEEcC Confidence 0000011111100000 0000000000 00000000000 0000011 11122222 Q ss_pred cccce--eEEeeccccccccccccchhhh---------------hhcCCceEEEEEecCCCcccceee-eeeccccc--- Q lcl|Aclame:pro 288 SVVQS--VVLSTKRGERDIYGSNIFIDDF---------------FAKGASNYIFATAQGWPKGFSGVI-KLNGGLSS--- 346 (660) Q Consensus 288 ~~~e~--~~v~~~~~~~~~~~~~~~~~~~---------------~~~g~~~~~~~~~~~~~~~~~~~~-~~~gg~~~--- 346 (660) ..... ..++... ........+... +..-+.+..+.............. ....|.+. T Consensus 122 ~~~t~~~i~lS~~t---s~~~vAs~i~~~l~a~~~~~~~~~tv~~d~~~~~F~v~s~~tG~~s~i~~at~~~~gt~~s~l 198 (507) T protein:vir:99 122 TVVPIAGIDLTAAL---TLTDVAATLQTKIRASANAELATATVTFNTTTNQFVLNGTTTGALAPTITAVRTDPATDISSL 198 (507) T ss_pred ceeEeccccccccC---CHHHHHHHHHHhhhccccccccceEEEEecCCceEEEEeeeccccceeEEEEcCCchhhHHHH Confidence 11110 0011000 000000000000 000011111111110000000000 00000000 Q ss_pred -------ccc---ccchhhhhhhhhhhhhhhcCcceeecccccCCchhhHHHHHHHHHHHHhhccCeEEEeccccceEEe Q lcl|Aclame:pro 347 -------NET---VEAGDLMEAWDLFADRESVNAQLFIAGSCAGESLEVASTVQKHVVAIGDSRQDCLVLCSPPRAAVVG 416 (660) Q Consensus 347 -------~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 416 (660) ... ....... +.+........+....-....+... ..-..++.+.++....+|.+... + T Consensus 199 ~~~~~~~a~~~~g~~aet~~---~a~~a~~~~~~nW~~~~~a~~~~~t--d~~~lalA~wiea~~~~f~~~~~------~ 267 (507) T protein:vir:99 199 LGWTNTGTVFVKGQAAETPD---TSISKSAAISTNFGSFIYTSTPALT--NDQITAVASWNASQNNMYMYSVP------T 267 (507) T ss_pred hccccccceEeecccccCHH---HHHHHHHhhcCCeEEEEEEeccccC--hHHHHHHHHHHhhcCcEEEEEEe------c Confidence 000 0000011 1111122112111110000111111 11123333444444333332210 0 Q ss_pred cCCCCcHHHHHHHhhhcccccccccccCcceEEEEechhcccccccccceeechHHHHHHHHHHhhccC--Cceecccce Q lcl|Aclame:pro 417 IPVNRAVDNLVDWRTASGTYTDNNFNISSTYAAIDGNYKYQYDKYNDVNRWVPLAADIAGLCARTDNIS--QPWMSPAGY 494 (660) Q Consensus 417 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~p~~~~~d~~~~~~~~~p~s~~~AG~~a~~d~~~--g~~~span~ 494 (660) .. . .......-.. ....+...++.+. .....+.+.+.|.++.+|-++ | -..-..| T Consensus 268 ~~-a-~~~~~~~~~~-----------~~~~~~~~~~~~~---------~~~~~~~aa~~g~~as~nf~~~ng-~~T~~fk 324 (507) T protein:vir:99 268 TI-A-NIGTLYAAVK-----------GFSGCALNITSDS---------LPVDYIEQSPCEILAATDYTRVNA-TQNYMYY 324 (507) T ss_pred Cc-h-hhhhhhhhhh-----------hcceeEEEeeccc---------ccchhHHHHHHHHHHhhccCcCcc-ceeeccc Confidence 00 0 0000000000 0000111111110 011124567777788776332 2 1122344 Q ss_pred eeceeeecccccccCChhhhhhhccccceEEEEecCCe--EEEecceecCCCCcccceehhhHHHHHHHHHHHHHHHHHh Q lcl|Aclame:pro 495 NRGQILNVIKLAIETRQAQRDRLYQEAINPVTGTGGDG--YVLYGDKTATSVPSPFDRINVRRLFNMVKTNIGSASKYRL 572 (660) Q Consensus 495 ~~~~v~~~~~~~~~~~~~e~~~Ln~~gin~i~~~~g~G--~~~wG~rT~~~~~~~~~~i~vrR~~~~i~~~~~~~~~~~v 572 (660) .+.||. ...++..|.+.|.++++|+...+.+.+ +.+|-.-.+++-..+|.++.+-+=.+||+..++..+.... T Consensus 325 ~l~GV~-----a~~lt~t~a~al~~~n~N~y~~~a~~~~~~~~~~~G~~~gG~~~fid~d~~~~~~WL~~~iq~~l~~l~ 399 (507) T protein:vir:99 325 QFPSRN-----ITVSDDTTANLVDANRGNYIGQTQSAGQSLAFYQRGILCGGPNDAVDMNIYANEIWLKSAISAQILSLF 399 (507) T ss_pred ccCCcc-----cccCCHHHHHHHHhcCCeEEEEeccccceeeEEecCeeeCCcccceeeeeecchHHHHHHHHHHHHHHH Confidence 444443 235889999999999999999886643 6666555444422246666666666788888888887643 Q ss_pred hc----CCCHHHHHHHHHHHHHHHHHHHhcCCeee-----------------------------EEEEEec-CCCCHHHh Q lcl|Aclame:pro 573 FE----LNNAFTRSSFRTETSQYLQGIKALGGVYN-----------------------------FKVVCDT-TNNTPAVI 618 (660) Q Consensus 573 ~e----pn~~~~~~~i~~~i~~~l~~l~~~gal~g-----------------------------~~v~~d~-~~nt~~~i 618 (660) -. |-|..=...|+..|+.-|+.-+++|.|.. |.+.++. ++.++++. T Consensus 400 ~~~~kIPyt~~G~~~l~a~i~~~l~~av~nG~I~~Gvtl~~~q~~~in~~~~~~~~~~~~~~~Gyy~~~~~~s~~~~~~r 479 (507) T protein:vir:99 400 LNVPRVPANETGESMLLSVIQSVVNTAKNNGTISAGKNLNVIQQQYITQISGDANAWRQVANIGYWLNITFSSYTNPNTQ 479 (507) T ss_pred hcCCCCccChhhHHHHHHHHHHHHHHHHhccccccCCcccccchheecccccccccccceeccceEEEeCChHhcChhhh Confidence 33 55788888999999999999999998742 6666643 44454443 Q ss_pred -hCCEEEEEEEEEecCcceEEEEEEEEe Q lcl|Aclame:pro 619 -DRNEFVATFYLQPARSINYITLNFVAT 645 (660) Q Consensus 619 -~~G~~~~~i~~~p~~p~e~i~~~~~~~ 645 (660) ..+...+.+.+.---.+++|++.-.-- T Consensus 480 ~~r~~~~~~~~y~~~gaI~~v~~~~~~v 507 (507) T protein:vir:99 480 LTEWKASYQLIYSKDDAIRFVEGTDTLI 507 (507) T ss_pred hccccceEEEEEEeCCeEEEEEeeeecC Confidence 356677777777788888877653332 No 66 >protein:vir:96104 Length: 504 # NCBI annotation: hypothetical protein ORF029 # Family: family:all:396 # MgeID: mge:1597 # MgeName: F8 # Cross-refs: genbank:acc:YP_001294446;genbank:gi:149408343;genbank:GeneID:5237223 Probab=71.85 E-value=0.19 Score=24.53 Aligned_cols=418 Identities=10% Similarity=0.000 Sum_probs=140.6 Q ss_pred Eeecccccccccccccccccccceeeeeeccccccceeeeecccccccccc-cccccccccccccceeeeccccc-ccc- Q lcl|Aclame:pro 144 FIPSGKIIAKAKEIGEYPELGSNWTAEMSGSSSGLSAVITIDSVVMDSGIL-LTEVETSEEAITSLTFQESIKKY-GVP- 220 (660) Q Consensus 144 ~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~- 220 (660) ..+.. ..+...+++........ ...... +......+. ..-..|....... .+. T Consensus 1 mip~s---------------------~iV~V~~~v~~~~~~~~--~~~~~l~l~~~~~~~~-~r~~~y~s~~~V~~~FG~ 56 (504) T protein:vir:96 1 MISQS---------------------RYIRIISGVGAGAPVAG--RKLILRVMTTNNVIPP-GIVIEFDNANAVLSYFGA 56 (504) T ss_pred CCCcc---------------------ceeEeeecccccccccc--cccceeEeecccCCCc-cceEEecCHHHHHHhcCC Confidence 00100 01110010000000000 000000 000000000 0000010000000 000 Q ss_pred -----cccccccccccccccccccccccccccceeeeeeccccccccccceeeee---------ccccCcccceeecccC Q lcl|Aclame:pro 221 -----GVVALYPGELGDQLEIEIVSKADYDKGASAQLKIYPDGGTRYSTAKAIFG---------YGPQTDDQYAIIVRRN 286 (660) Q Consensus 221 -----~~~a~~~g~~g~~i~v~i~s~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~v~~~ 286 (660) .....+.....+.. .....+.... .. +......... .....+..++ +..+ T Consensus 57 ~S~ey~aA~~yF~~~~~~~---------~~P~~l~igR-~~----~~a~~~~l~g~~~~~~~~~~~~i~~G~ls--itv~ 120 (504) T protein:vir:96 57 QSEEYQRAAAYFKFISKSV---------NSPSSISFAR-WV----NTAIAPMVVGDNLPKTIADFAGFSAGVLT--IMVG 120 (504) T ss_pred ChHHHHHHHHHhhcCCCCC---------ccccEEEEEe-ec----CcCccceEEechhHHHHHHHhhhhceEEE--EEEc Confidence 00001111100000 0000000000 00 0000000000 0000111111 1112 Q ss_pred Ccccc--eeEEeeccccccccccccchhh---------------hhhcCCceEEEEEecCCCc-----------ccceee Q lcl|Aclame:pro 287 DSVVQ--SVVLSTKRGERDIYGSNIFIDD---------------FFAKGASNYIFATAQGWPK-----------GFSGVI 338 (660) Q Consensus 287 g~~~e--~~~v~~~~~~~~~~~~~~~~~~---------------~~~~g~~~~~~~~~~~~~~-----------~~~~~~ 338 (660) |.... ...++... ........+.. .+..-.++..+........ +....+ T Consensus 121 G~~~~~~~i~~S~~t---s~~~vA~~i~~al~~~~~~~~~~~tv~~d~~~~~f~its~~tg~~~~~~~~~a~~~~~~~~l 197 (504) T protein:vir:96 121 AAEKNITAIDTSAAT---SMDNVASIIQTEIRKNTDPQLAQATVTWNPNTNQFTLVGATIGTGVLAVAKSADPQDMSTAL 197 (504) T ss_pred ceeeeeccccccccc---chHHHHHHHHhhhhcccccccccceEEEeccCCeEEEEeeccccceeEEEeeccccchhhhh Confidence 21110 00011000 00000000000 0000111111111110000 000000 Q ss_pred eeecccccc-ccccchhhhhhhhhhhhhhhcCcceeecccccCCchhhHHHHHHHHHHHHhhccCeEEEeccccceEEec Q lcl|Aclame:pro 339 KLNGGLSSN-ETVEAGDLMEAWDLFADRESVNAQLFIAGSCAGESLEVASTVQKHVVAIGDSRQDCLVLCSPPRAAVVGI 417 (660) Q Consensus 339 ~~~gg~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 417 (660) .+..+.... ......... +.+........+....-....+ .. .....++...++....++.+.. .+. T Consensus 198 gl~~~~~~~v~g~~aet~~---~al~al~~~~~~Wy~f~~a~~~-~~--dd~ilalA~w~ea~~~~~~~~~------~~~ 265 (504) T protein:vir:96 198 GWSTSNVVNVAGQAADLPD---AAVAKSTNVSNNFGSFLFAGAT-LD--NDQIKAVSAWNAAQNNQFIYTV------ATS 265 (504) T ss_pred hcccccceEEeecccccHH---HHHHHHHhhcCCeEEEEEEecc-CC--HHHHHHHHHHHhhcCceEEEEE------eec Confidence 000000000 000000000 1111111111111000000000 00 0111233333333332222110 000 Q ss_pred CCCCcHHHHHHHhhhcccccccccccCcceEEEEechhcccccccccceeechHHHHHHHHHHhhccC--Cceeccccee Q lcl|Aclame:pro 418 PVNRAVDNLVDWRTASGTYTDNNFNISSTYAAIDGNYKYQYDKYNDVNRWVPLAADIAGLCARTDNIS--QPWMSPAGYN 495 (660) Q Consensus 418 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~p~~~~~d~~~~~~~~~p~s~~~AG~~a~~d~~~--g~~~span~~ 495 (660) . ... ......... .......+++.. .... -++.+..+.++.+|-++ | -..-.+|. T Consensus 266 ~-~~~-~~~~~~~~~----------~~~~~~~~~~~~---------~~~~-~~~~~~~~~~as~~f~~~ng-~~T~~fk~ 322 (504) T protein:vir:96 266 L-ANL-GALFDLVKG----------NSGTALNVLSAT---------ASND-FVEQCPSEILAATNYDEPGA-SQNYMYYQ 322 (504) T ss_pred c-cch-hhHHHhhhh----------cceeEEEEeecC---------ccch-hHHHHHHHHHHhcCcCcccc-cccccccc Confidence 0 000 000000000 000011111110 0011 13455667777776333 2 11223455 Q ss_pred eceeeecccccccCChhhhhhhccccceEEEEecCCe--EEEe-cceecCCCCcccceehhhHHHHHHHHHHHHHHHHHh Q lcl|Aclame:pro 496 RGQILNVIKLAIETRQAQRDRLYQEAINPVTGTGGDG--YVLY-GDKTATSVPSPFDRINVRRLFNMVKTNIGSASKYRL 572 (660) Q Consensus 496 ~~~v~~~~~~~~~~~~~e~~~Ln~~gin~i~~~~g~G--~~~w-G~rT~~~~~~~~~~i~vrR~~~~i~~~~~~~~~~~v 572 (660) +.||. ...++..|.+.|..+++|++..+.+.| +.+| ...++++.. +|.+|.+-+-.+||+..|+..+.... T Consensus 323 l~GVt-----a~~lt~t~~~aL~~~~~N~y~~~a~~~~~~~~~~~G~~~gG~~-~~~wiDv~~~~~WL~~~lq~~l~~l~ 396 (504) T protein:vir:96 323 FPGRN-----ITVSDDTAANTVDKSRGNYIGVTQANGQQLAFYQRGILCGGPT-DAVDMNVYANEIWLKSAIAQALLDLF 396 (504) T ss_pred cCCcC-----cccCCHHHHHHHHhcCCeEEEEeecccceeeEEecCeeeCCcc-ccchhhhhhhHHHHHHHHHHHHHHHH Confidence 55553 235789999999999999998887554 4444 444544431 46678888889999999999998754 Q ss_pred hc----CCCHHHHHHHHHHHHHHHHHHHhcCCee-----------------------------eEEEEEec-CCCCHHHh Q lcl|Aclame:pro 573 FE----LNNAFTRSSFRTETSQYLQGIKALGGVY-----------------------------NFKVVCDT-TNNTPAVI 618 (660) Q Consensus 573 ~e----pn~~~~~~~i~~~i~~~l~~l~~~gal~-----------------------------g~~v~~d~-~~nt~~~i 618 (660) -. |-|..=..+|+..++.-|++-+++|.|. ||.|.++. ++.++++. T Consensus 397 ~~~~kIPyt~~Gi~~l~a~i~~vl~~av~~G~I~~Gv~~~~~q~~~I~~~~~~d~~~~~~~~~GYyv~~~~~s~~s~~~r 476 (504) T protein:vir:96 397 LNVNAVPASMVGEAMTLAVLQPVLDKATSNGTFTYGKDISAVQQQYITQITGDRRAWRQVQTLGYWINITFSSYTNSNTG 476 (504) T ss_pred hcCCCcccCHhhHHHHHHHHHHHHHHHHhcceeccCccCCccchheecccccccccccceeccceEEEecChhccChhHh Confidence 43 4478888999999999999999999772 47777753 44555544 Q ss_pred hC-CEEEEEEEEEecCcceEEEEEEEEe Q lcl|Aclame:pro 619 DR-NEFVATFYLQPARSINYITLNFVAT 645 (660) Q Consensus 619 ~~-G~~~~~i~~~p~~p~e~i~~~~~~~ 645 (660) .+ +-..|.+.+.---.+++|++.-.-- T Consensus 477 ~~R~~~~~~~~y~~~gaI~~v~~~~~~v 504 (504) T protein:vir:96 477 LTEWKANYTLIYSKGDAIRFVEGSDVMI 504 (504) T ss_pred hhccccceEEEEEECCeEEEEEeccccC Confidence 44 4557777777788888877652222 No 67 >protein:vir:94073 Length: 494 # NCBI annotation: hypothetical protein # Family: family:all:396 # MgeID: mge:1493 # MgeName: OP2 # Cross-refs: genbank:acc:YP_453619;genbank:gi:84662655;genbank:GeneID:5142583 Probab=61.64 E-value=0.35 Score=23.09 Aligned_cols=416 Identities=11% Similarity=0.040 Sum_probs=135.2 Q ss_pred cCCceeeEEeecccccccccccccccccccceeeeeeccccccceeeeeccc-ccccccccccccccccccccceeeecc Q lcl|Aclame:pro 136 SDGKILNIFIPSGKIIAKAKEIGEYPELGSNWTAEMSGSSSGLSAVITIDSV-VMDSGILLTEVETSEEAITSLTFQESI 214 (660) Q Consensus 136 ~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (660) ..+... . ..+...+.+ .+.... ...+... .......+. ..-..|.... T Consensus 1 m~~ip~------s------~iV~V~~~v----------~~~~~~-~~~f~~~l~~~~~~~~~--------~r~~~y~s~~ 49 (494) T protein:vir:94 1 MPNIPI------S------QIVSINPQV----------VSAGGT-QGTLDGLLLTQATGFPV--------TQPQVYFSAA 49 (494) T ss_pred CCCCCc------c------cEEEeeeec----------cccCCc-ccccceeEeecCccCCc--------cceeeecCHH Confidence 000000 0 000000000 000000 0000000 000000000 0000000000 Q ss_pred ----------ccccccccccc---ccccccccccccccccccccccceeeeeeccccccccccceeeeeccccCccccee Q lcl|Aclame:pro 215 ----------KKYGVPGVVAL---YPGELGDQLEIEIVSKADYDKGASAQLKIYPDGGTRYSTAKAIFGYGPQTDDQYAI 281 (660) Q Consensus 215 ----------~~~~~~~~~a~---~~g~~g~~i~v~i~s~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (660) ..+.....+-. +.......+-+. .. ........ ..+.....+-.. -...+..+ T Consensus 50 ~V~~~FG~~S~ey~aA~~yFs~~~~q~p~P~~l~ig--R~---~~~a~~~~---l~g~~~~~tl~~----~~~~~g~l-- 115 (494) T protein:vir:94 50 DVGTAFGLTSDEYNAALVYFAGILGGGQQPASLTIG--RY---ASAATSAA---VFGAPLTLSLAQ----LQTLSGTL-- 115 (494) T ss_pred HHHHhcCCChHHHHHHHHHhhhccCCCccccEEEEE--ee---cCccccce---eeccchhhhHHh----hhhcceEE-- Confidence 00000000000 000000000000 00 00000000 000000000000 00000011 Q ss_pred ecccCCccccee--EEeeccccccccccccchhhhh---------hcCCceEEEEEecCCCcccceeeeeecccc----- Q lcl|Aclame:pro 282 IVRRNDSVVQSV--VLSTKRGERDIYGSNIFIDDFF---------AKGASNYIFATAQGWPKGFSGVIKLNGGLS----- 345 (660) Q Consensus 282 ~v~~~g~~~e~~--~v~~~~~~~~~~~~~~~~~~~~---------~~g~~~~~~~~~~~~~~~~~~~~~~~gg~~----- 345 (660) .+..+|. .... .++... ........+.... .......++. ....+. ...+....+.. T Consensus 116 ~iti~g~-~~~~~i~lS~~t---s~~~vA~~i~~ai~~a~~~v~~d~~~~~f~v~-s~ttG~--~s~is~~t~~~a~~l~ 188 (494) T protein:vir:94 116 IVTTDTQ-RTSAAINLSGAT---SFANAASLMTSGFTTPNFAITYDAQRRRFVLS-TTATGT--TASVSAVTGTLADGVG 188 (494) T ss_pred EEEEcce-EEEeeecccccC---ChhhHHHHHhhhhccccceEEEcccCcEEEEE-EccCCc--eeEEEEeccchhhhhh Confidence 1111111 0000 000000 0000000000000 0001111111 111110 01111111000 Q ss_pred ----ccc-----cccchhhhhhhhhhhhhhhcCcceeecccccCCchhhHHHHHHHHHHHHhhccCeEEEe--ccccceE Q lcl|Aclame:pro 346 ----SNE-----TVEAGDLMEAWDLFADRESVNAQLFIAGSCAGESLEVASTVQKHVVAIGDSRQDCLVLC--SPPRAAV 414 (660) Q Consensus 346 ----~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~--~~~~~~~ 414 (660) ... +........ .+........+.........++.++. .++.+..+....++.++ +... .. T Consensus 189 lt~~~~a~v~~~g~~aet~~~---a~~a~~~~~~~Wy~f~~~~~~~~~~i----lalA~wiea~~~~~~~~~~~~d~-~~ 260 (494) T protein:vir:94 189 LSTASGAYVEGSGLAADTAAS---ALDRLAASSSTWAIFTTAWAASLSDR----TALAQWTSDQVFRRIYAAWDQDA-AG 260 (494) T ss_pred hhccccceEeecCcccccHHH---HHHHHHhccCceEEEEEecCCCHHHH----HHHHHHHhhcCccEEEEEecCCc-ce Confidence 000 000011111 22222222222211111111222222 23333333333322222 1110 11 Q ss_pred EecCCCCcHHHHHHHhhhcccccccccccCcceEEEEechhcccccccccceeechHHHHHHHHHHhhccCCceecccce Q lcl|Aclame:pro 415 VGIPVNRAVDNLVDWRTASGTYTDNNFNISSTYAAIDGNYKYQYDKYNDVNRWVPLAADIAGLCARTDNISQPWMSPAGY 494 (660) Q Consensus 415 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~p~~~~~d~~~~~~~~~p~s~~~AG~~a~~d~~~g~~~span~ 494 (660) ++.... .+....-.. .+..|..+.|+. ..|.+++.|..+.+|-++ .+.+. T Consensus 261 ~~~~~~---~~i~~~l~~----------~~y~~t~~~y~~-------------~~~~aa~~g~~aa~~~~~----~~g~~ 310 (494) T protein:vir:94 261 LSVNNV---SSFGNIVKT----------TPFSNTIPVYGL-------------LANAMIVLAWGASTNLQI----AEGRT 310 (494) T ss_pred eecccc---hhHHHHHHh----------hcCCceEEEcCC-------------CChHHHHHHHHHhccccc----cCcce Confidence 111111 111111110 112244444431 124466677777776433 34444 Q ss_pred eeceeeeccccc-ccCChhhhhhhccccceEEEEecC--CeEEEecceecCCCCcccceehhhHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 495 NRGQILNVIKLA-IETRQAQRDRLYQEAINPVTGTGG--DGYVLYGDKTATSVPSPFDRINVRRLFNMVKTNIGSASKYR 571 (660) Q Consensus 495 ~~~~v~~~~~~~-~~~~~~e~~~Ln~~gin~i~~~~g--~G~~~wG~rT~~~~~~~~~~i~vrR~~~~i~~~~~~~~~~~ 571 (660) .+..-.-..+.. -.++..|.+.|..+++|++..+.+ .-+.+|...+++++ |.+|-.-+=.+|++..|+..+... T Consensus 311 T~~~k~q~~gi~~~~l~~t~a~al~~~~~N~y~~~~~~~~~~~~~~gg~~sG~---~~~id~~~~~~WL~~~iq~~l~~l 387 (494) T protein:vir:94 311 TLALRSPVSSAGVRVDNLANANALLSNGYTYLGKYASATNTYTVTYNGAIGGQ---FLWADTALGWIALRRNLQQALFET 387 (494) T ss_pred eEEeeccCCCCCCccCCHHHHHHHHhcCCeEEEEecccCceEEEecCceeccc---cceeeeeccHHHHHHHHHHHHHHH Confidence 432110011222 236788999999999999988853 34678877777664 322322223457777777777654 Q ss_pred hhc----CCCHHHHHHHHHHHHHHHHHHHhcCCee----------------------------eEEEEE-e-cCCCCHHH Q lcl|Aclame:pro 572 LFE----LNNAFTRSSFRTETSQYLQGIKALGGVY----------------------------NFKVVC-D-TTNNTPAV 617 (660) Q Consensus 572 v~e----pn~~~~~~~i~~~i~~~l~~l~~~gal~----------------------------g~~v~~-d-~~~nt~~~ 617 (660) .-. |-|..=...|+..|+.-|++-+++|.|. ||.+.. + .+.++..+ T Consensus 388 l~~~~KIPytd~G~~~l~a~i~~~l~~av~nG~I~~Gv~~~~~q~~~i~~~~G~~~~~~~~~kGyy~~~~~~~s~~~ra~ 467 (494) T protein:vir:94 388 LLAYRSLPYNADGYNALYQGAQDVVSQFVAAGVIRAGVALSASQRAQIDQAAGVPISGDVVDKGWYLQVIDPITTTVRTD 467 (494) T ss_pred HHhCCCcccChhhHHHHHHHHHHHHHHHHhCceeecccccCcchhhhhhhhhcCccccceeccceeeeccCCCChhhhhc Confidence 332 5678888999999999999999999984 245543 2 23344443 Q ss_pred hhCCEEEEEEEEEecCcceEEEEEEEEee Q lcl|Aclame:pro 618 IDRNEFVATFYLQPARSINYITLNFVATA 646 (660) Q Consensus 618 i~~G~~~~~i~~~p~~p~e~i~~~~~~~~ 646 (660) ...- .+.+.+.--..+++|.+...--+ T Consensus 468 R~~~--~~~~~y~~~GAIh~v~i~~~~v~ 494 (494) T protein:vir:94 468 RGSP--TVNFWYCDGGSIQRVVVSATTVI 494 (494) T ss_pred cccC--CceEEEEecCcEEEEEEeeEEeC Confidence 3333 34444445788888888766666 No 68 >protein:vir:107720 Length: 515 # NCBI annotation: gp17 # Family: family:all:396 # MgeID: mge:1520 # MgeName: BcepB1A # Cross-refs: genbank:acc:YP_024865;genbank:gi:48697507;genbank:GeneID:2948336 Probab=52.87 E-value=0.54 Score=22.04 Aligned_cols=468 Identities=10% Similarity=-0.028 Sum_probs=185.7 Q ss_pred CccccCceEEEEecCCcccccCCc-C-ceeEEeecccCCCCccEEecCHHHHHHHcCCcCCcchhHHHHHHHHH---hc- Q lcl|Aclame:pro 1 MALLSPGVELKETTVQSTVVNNST-G-TAALAGKFQWGPAFQIKQITDEVALVDMFGTPNTDTADYFMSAMNFL---QY- 74 (660) Q Consensus 1 ~~~~~PGVyveE~~~~~~i~gv~T-s-~~afvG~~~~Gpv~~p~~i~s~~e~~~~fG~~~~~~~~~~~v~~~f~---ng- 74 (660) |. +..-|||+..+.+..-.|++. . ..-+++.-..=|+++...-+|..|-...||. .+.++.+++.+|- |. T Consensus 1 m~-I~~~~~V~i~~~v~aa~~~~~~~f~~li~t~~~~~p~~r~~~y~s~~~V~~~FG~---~S~ey~aA~~yFsg~~~q~ 76 (515) T protein:vir:10 1 MP-ISFDKYVAITSGVAAQQQIAARSFAIRVYTPNPMVSVDRLITATSAADVGAYFGT---ASEEYKRAVKNFGFISKKT 76 (515) T ss_pred CC-CCceeEEEeecccccCCccccccceeeeeecccCCCccceeeecCHHHHHHhcCC---ChHHHHHHHHHhhhccCCc Confidence 66 677788886666666666555 2 2333455556688888888999999999994 4567777888875 22 Q ss_pred --CCEEEEEEccCccccccccccccccccccccccccccccceeEEeccccccccccceeeeecCCceeeEEeecccccc Q lcl|Aclame:pro 75 --GNDLRVVRAVDRDTAKNSSPVAGNINFTISSAGTNYRVGDKVVVKYSTDIIEPDGEVTSVDSDGKILNIFIPSGKIIA 152 (660) Q Consensus 75 --G~~~~vvRv~~~~~~~~a~~~~~~l~~t~~~~g~~~~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~ 152 (660) =++|||-|=.... .++...++.+.....+.-.. + .++. +.+..+|..+.+. T Consensus 77 p~P~~L~igR~~~~a--~~~~l~g~~~~~~~l~~~~~--------i--------s~G~-ltitidG~~~~t~-------- 129 (515) T protein:vir:10 77 RRPTSIQFARWQREA--GPVAIYGGAKKAAALATLQA--------V--------TAGA-ISFLFGGATTVTV-------- 129 (515) T ss_pred ccccEEEEEeccCcc--cceEEEeccchhhhHHhhhc--------c--------ccee-EEEEEcceEEEEe-------- Confidence 2368999854311 11111111110000000000 0 0000 0000000000000 Q ss_pred cccccccccccccceeeeeeccccccceeeeecccccccccccccccccccccccceeeecccccccccccccccccccc Q lcl|Aclame:pro 153 KAKEIGEYPELGSNWTAEMSGSSSGLSAVITIDSVVMDSGILLTEVETSEEAITSLTFQESIKKYGVPGVVALYPGELGD 232 (660) Q Consensus 153 ~a~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~g~~g~ 232 (660) +. -..+... .+.+ ... T Consensus 130 --------------------s~-i~~S~at-----------s~~~---------------vAs----------------- 145 (515) T protein:vir:10 130 --------------------SG-ISFSAAT-----------SLAD---------------VAS----------------- 145 (515) T ss_pred --------------------ec-ccccccc-----------CHHH---------------HHH----------------- Confidence 00 0000000 0000 000 Q ss_pred cccccccccccccccceeeeeeccccccccccceeeeeccccCcccceeecccCCc-ccceeEEeeccccccccccccch Q lcl|Aclame:pro 233 QLEIEIVSKADYDKGASAQLKIYPDGGTRYSTAKAIFGYGPQTDDQYAIIVRRNDS-VVQSVVLSTKRGERDIYGSNIFI 311 (660) Q Consensus 233 ~i~v~i~s~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~-~~e~~~v~~~~~~~~~~~~~~~~ 311 (660) .+...+....+.+.... ...-......|.+.....|. ...++.....+....+ ... T Consensus 146 ~i~tal~~~~~~~~~~~-------------------tv~~d~~~~~F~v~s~~tG~~~~is~~~~t~~~~~t~----~a~ 202 (515) T protein:vir:10 146 ELQTALRANADANLATC-------------------TVSYDPVGARFNFAGSPSDDTVQESISIVPQSNPAID----VAQ 202 (515) T ss_pred HHHhhhcccccccccee-------------------EEEEecCCCeEEEEEeecCCceeEEEEEecCCCchhh----HHH Confidence 00000000000000000 00000111122222111111 1111111111110000 000 Q ss_pred hhhhhcCCceEEEEEecCCCcccceeeeeeccccccccccchhhhhhhhhhhhhhhcCcceeecccccCCchhhHHHHHH Q lcl|Aclame:pro 312 DDFFAKGASNYIFATAQGWPKGFSGVIKLNGGLSSNETVEAGDLMEAWDLFADRESVNAQLFIAGSCAGESLEVASTVQK 391 (660) Q Consensus 312 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 391 (660) ......+.. ...+.|..... ...+ +........+.........+..+....... T Consensus 203 ~lglt~~~~-----------------av~~~g~aaet------~~~a---~~a~~~~s~nWy~f~~a~~~~~~~~~a~~~ 256 (515) T protein:vir:10 203 LLGWNSAQG-----------------ASYIAASPVVS------PVDT---LIASVAGNNNFGSILFTKNGGTGITLSDAE 256 (515) T ss_pred Hhccccccc-----------------eEEeccccccc------HHHH---HHHHHhccCCeEEEEEeecCccccchhHHH Confidence 000000000 01111222111 1111 222222222221110011111111112223 Q ss_pred HHHHHHhhccCeEEEeccccceEEecCCCCcHHHHHHHhhhcccccccccccCcceEEEEechhcccccccccceeechH Q lcl|Aclame:pro 392 HVVAIGDSRQDCLVLCSPPRAAVVGIPVNRAVDNLVDWRTASGTYTDNNFNISSTYAAIDGNYKYQYDKYNDVNRWVPLA 471 (660) Q Consensus 392 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~p~~~~~d~~~~~~~~~p~s 471 (660) ++....+....++.....- .. ....+.-...... . ...+...++|... + .+. T Consensus 257 a~a~~~e~~~~~~~~~~~~------~~-~~~~~~~a~~~~~-~---------~~~~~~~~~~~~~---~--------~~~ 308 (515) T protein:vir:10 257 AIALQNQSYNVAYKFQVGV------DD-TTYSSWQAALAAI-G---------GVNMIYSPVALAA---E--------YHD 308 (515) T ss_pred HHHHHHhhcCceEEEEecc------Cc-cceechhhhhhhh-h---------hcCceEEEEeccC---c--------chH Confidence 3334444443333222110 00 1110010011100 0 0111122222111 0 123 Q ss_pred HHHHHHHHHhhccCC-ceecccceeeceeeecccccccCChhhhhhhccccceEEEEecC--CeEEEecceecCCCCccc Q lcl|Aclame:pro 472 ADIAGLCARTDNISQ-PWMSPAGYNRGQILNVIKLAIETRQAQRDRLYQEAINPVTGTGG--DGYVLYGDKTATSVPSPF 548 (660) Q Consensus 472 ~~~AG~~a~~d~~~g-~~~span~~~~~v~~~~~~~~~~~~~e~~~Ln~~gin~i~~~~g--~G~~~wG~rT~~~~~~~~ 548 (660) ...+|.++.+|-++- =...-..|.+.||.. -.+++.|.+.|.++++|+...+.+ ..+.+|-.-++.+-..+| T Consensus 309 a~~~g~~asvnf~~~ng~iT~kfKq~~Gita-----~~lt~t~a~al~~~~~N~Y~~~~~~~~~~~~~~~G~~~gG~~~~ 383 (515) T protein:vir:10 309 MQDGIIEAATDFTQQGGATGYMYVQFNNQTP-----AVNDDTLSGILDDLNINYYGQTQVNGTNLSFYQDGVMMGGPTDP 383 (515) T ss_pred HHHHHHHHhcCCCccchhheeccccCCCCcc-----ccCCHHHHHHHHhcCCeEEEEEeccCceEEEEeCCeeeCCccch Confidence 455677777763321 122233454444432 347889999999999999988865 358888666665544457 Q ss_pred ceehhhHHHHHHHHHHHHHHHHHhhc----CCCHHHHHHHHHHHH-HHHHHHHhcCCeee-------------------- Q lcl|Aclame:pro 549 DRINVRRLFNMVKTNIGSASKYRLFE----LNNAFTRSSFRTETS-QYLQGIKALGGVYN-------------------- 603 (660) Q Consensus 549 ~~i~vrR~~~~i~~~~~~~~~~~v~e----pn~~~~~~~i~~~i~-~~l~~l~~~gal~g-------------------- 603 (660) .+|.+.|-.+||+..++..+....-. |-+..=...|+..|. .-|+.-+++|.|.- T Consensus 384 ~WiD~~~g~~WL~~~iq~~l~~L~~s~~KIPytd~G~a~i~a~v~q~vl~~av~nG~I~~Gv~ls~~Q~~~i~~~~g~d~ 463 (515) T protein:vir:10 384 RDSNVYANEQWLKSYAGASFMSLQLAQGKIPANIEGRGLLLGKMTKDIIPAAKLNGTFSIGKTLTVDQQLFVTELTGDDT 463 (515) T ss_pred hHHHHHhhHHHHHHHHHHHHHHHHhcCCCCccChhhHHHHHHHHHHHHHHHHHhCCeeecCcccchhHHHHHHhhhcCcc Confidence 78999999999999999999874322 345555667776664 57877788887753 Q ss_pred ---------EEEEE-ecCCCCHHHhhCCEEEEEEEEEecCcceEEEEEEEEe Q lcl|Aclame:pro 604 ---------FKVVC-DTTNNTPAVIDRNEFVATFYLQPARSINYITLNFVAT 645 (660) Q Consensus 604 ---------~~v~~-d~~~nt~~~i~~G~~~~~i~~~p~~p~e~i~~~~~~~ 645 (660) |.+.. +.+..++.+...+.+.+..-+.-=-.+++|+....-- T Consensus 464 ~~~~~~~~Gyy~~~~~~~~~~~~~r~~~~~~~~~~y~~g~~i~~i~~~~~~v 515 (515) T protein:vir:10 464 AWQKVQNLGYWYDVQISSFVDTGGTTKYQAVYSLVYSKDDLIRKVVGTHTLI 515 (515) T ss_pred cccchhhcceeEecCcCCCCCcccccccCceeEEEEEcCceEEEEEeeeecC Confidence 22221 1122222333333333333333334444444332221 No 69 >protein:vir:78611 Length: 501 # NCBI annotation: BcepNY3gp03 # Family: family:all:396 # MgeID: mge:1854 # MgeName: BcepNY3 # Cross-refs: genbank:acc:YP_001294840;genbank:gi:149882903;genbank:GeneID:5291082 Probab=23.69 E-value=2.3 Score=18.63 Aligned_cols=451 Identities=10% Similarity=0.027 Sum_probs=191.3 Q ss_pred Ccc--ccCceEEEEecCCcccccCCcC-ceeEEeecccCCCCccEEecCHHHHHHHcCCcCCcchhHHHHHHHHH----h Q lcl|Aclame:pro 1 MAL--LSPGVELKETTVQSTVVNNSTG-TAALAGKFQWGPAFQIKQITDEVALVDMFGTPNTDTADYFMSAMNFL----Q 73 (660) Q Consensus 1 ~~~--~~PGVyveE~~~~~~i~gv~Ts-~~afvG~~~~Gpv~~p~~i~s~~e~~~~fG~~~~~~~~~~~v~~~f~----n 73 (660) |.+ +-=--||+......+-.+..-+ .+-|++....=|+++....+|..|-...||. .+.++.+++.+|- + T Consensus 1 m~~~~ip~s~iV~V~~~v~~~~~~~~~~~~lll~~~~~~~~~r~~~y~s~~~V~~~FG~---~S~ey~aA~~yFs~~~~q 77 (501) T protein:vir:78 1 MPTTTIPIDQIVQMLPGVIGAGGAPGRLTGLVLTQDTSIQPGQLADFFQKTDVENWFGG---LSNEAVIADAYFPGIVNG 77 (501) T ss_pred CCcCccccceEEEEeeecccCCCcceeeeeEEEecCCCCCccceeeecCHHHHHHhcCC---ChHHHHHHHHHhhcCCCC Confidence 776 4445666655433333332222 2345555555688888888899999999994 5567888888886 3 Q ss_pred cC--CEEEEEEccCccccccccccccccccccccccccccccceeEEeccccccccccceeeeecCCceeeEEeeccccc Q lcl|Aclame:pro 74 YG--NDLRVVRAVDRDTAKNSSPVAGNINFTISSAGTNYRVGDKVVVKYSTDIIEPDGEVTSVDSDGKILNIFIPSGKII 151 (660) Q Consensus 74 gG--~~~~vvRv~~~~~~~~a~~~~~~l~~t~~~~g~~~~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 151 (660) -= +++||-|-.+.... +...++.+.....+.-.. ..-.+++.+..... ...++ ....... T Consensus 78 ~~~P~~l~igR~~~~a~~--~~l~g~~l~~~~la~~~~--~~G~l~iti~g~~~-----~~~i~---------~S~~ts~ 139 (501) T protein:vir:78 78 GQLPYDLKFARYVAADAP--ASVYGIPLTGVTLTQLQG--YSGTLTVTTAAQHV-----SSNIS---------LAAATSF 139 (501) T ss_pred CcccceEEEEeecccCcc--eeEeccceeccchhhhce--eeeEEEEEecccee-----eeccc---------cccccCH Confidence 22 26899997653221 111122221110011000 00111221111000 00000 0000000 Q ss_pred -ccccccccccccccceeeeeeccccccceeeeecccccccccccccccccccccccceeeecccccccccccccccccc Q lcl|Aclame:pro 152 -AKAKEIGEYPELGSNWTAEMSGSSSGLSAVITIDSVVMDSGILLTEVETSEEAITSLTFQESIKKYGVPGVVALYPGEL 230 (660) Q Consensus 152 -~~a~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~g~~ 230 (660) +-+..+ ...... .+.....+.. . ..+.......+....+.+.. . .... T Consensus 140 ~~vA~~i--~~al~a------------~~~tv~~ds~--~--~~f~its~t~G~~~~i~~~t--~-----------~~~~ 188 (501) T protein:vir:78 140 ANAATLI--EAAFTS------------PDFVVSYDAL--R--NRFVVNTNATGTAAAISAVT--G-----------TNNL 188 (501) T ss_pred HHHHHHH--HhhhcC------------cceEEEEccc--c--ceEEEEeeecCCceeEEEEe--c-----------ccch Confidence 000000 000000 0000000000 0 00000000000000000000 0 0000 Q ss_pred cccccccccccccccccceeeeeeccccccccccceeeeeccccCcccceeecccCCcccceeEEeeccccccccccccc Q lcl|Aclame:pro 231 GDQLEIEIVSKADYDKGASAQLKIYPDGGTRYSTAKAIFGYGPQTDDQYAIIVRRNDSVVQSVVLSTKRGERDIYGSNIF 310 (660) Q Consensus 231 g~~i~v~i~s~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~e~~~v~~~~~~~~~~~~~~~ 310 (660) +..+.+. ...+..+...+.. .+ T Consensus 189 a~~l~Lt------------------------~~~~a~v~~~g~~---------------ae------------------- 210 (501) T protein:vir:78 189 ADELGLS------------------------AAAGASLQAAGVA---------------AD------------------- 210 (501) T ss_pred hhhhccc------------------------ccCceeeEecccc---------------cc------------------- Confidence 0000000 0000000000000 00 Q ss_pred hhhhhhcCCceEEEEEecCCCcccceeeeeeccccccccccchhhhhhhhhhhhhhhcCcceeecccccCCchhhHHHHH Q lcl|Aclame:pro 311 IDDFFAKGASNYIFATAQGWPKGFSGVIKLNGGLSSNETVEAGDLMEAWDLFADRESVNAQLFIAGSCAGESLEVASTVQ 390 (660) Q Consensus 311 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 390 (660) +.. .+ +........+.........+.. .-. T Consensus 211 ----------------------------------------t~~---~a---~~a~~~~~~~Wy~f~~a~~~~~----~~~ 240 (501) T protein:vir:78 211 ----------------------------------------TPA---SA---MNRAVGLSRNWATFTTAWTAVI----ADR 240 (501) T ss_pred ----------------------------------------CHH---HH---HHHHHhccCceEEEEEecCCCH----HHH Confidence 000 00 0000111111100000000111 112 Q ss_pred HHHHHHHhhccCeEEEe--ccccceEEecCCCCcHHHHHHHhhhcccccccccccCcceEEEEechhcccccccccceee Q lcl|Aclame:pro 391 KHVVAIGDSRQDCLVLC--SPPRAAVVGIPVNRAVDNLVDWRTASGTYTDNNFNISSTYAAIDGNYKYQYDKYNDVNRWV 468 (660) Q Consensus 391 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~p~~~~~d~~~~~~~~~ 468 (660) .++...++....+|.++ +... ..++.... .-+..+-. . -+..+...+|+. . T Consensus 241 lalA~wiea~~~~f~~~~~~~~~-~~~~~~~~----~~i~~~l~-------a--~~y~~t~~~y~~-------------~ 293 (501) T protein:vir:78 241 LALASWNSGQAYKYMYVAPDLEP-ASIVTNNS----ASFGAQVF-------A--APYQGTLPLYGD-------------Q 293 (501) T ss_pred HHHHHHHHhcCceEEEEEecCCc-ceeecccc----hhHHHHHh-------h--cCCCceEEEcCC-------------c Confidence 23344444444333322 1110 11111111 11111100 0 112244444431 1 Q ss_pred chHHHHHHHHHHhhccCCc-eecccceee-ceeeecccccccCChhhhhhhccccceEEEEecCCe--EEEecceecCCC Q lcl|Aclame:pro 469 PLAADIAGLCARTDNISQP-WMSPAGYNR-GQILNVIKLAIETRQAQRDRLYQEAINPVTGTGGDG--YVLYGDKTATSV 544 (660) Q Consensus 469 p~s~~~AG~~a~~d~~~g~-~~span~~~-~~v~~~~~~~~~~~~~e~~~Ln~~gin~i~~~~g~G--~~~wG~rT~~~~ 544 (660) .+.+++.|.++.+|-++-. -..-.+|.+ .|+. .-.++..|.+.|..+|+|++..+.+.+ +.+|-.-+++++ T Consensus 294 ~~~aa~~g~~as~nf~~~~g~~T~~fkq~~~Gv~-----a~~l~~t~a~al~~~~~N~y~~~~~~~~~~~~~~~G~~sG~ 368 (501) T protein:vir:78 294 ATAGAVMGYAASINFQLRNGRTVLAFRQFNAGVP-----ATAHDLGTANALRSNNYTYIGAYANAANNYTIAYDGKLSGK 368 (501) T ss_pred chHHHHHHHHHhcCcccCcceeeeeccccCCCcC-----cccCCHHHHHHHHhcCCeEEEEEecccceeeEEEcCeeecc Confidence 2356777888888754311 111123322 1221 134788999999999999998886544 778855566654 Q ss_pred CcccceehhhHHHHHHHHHHHHHHHHHhhc----CCCHHHHHHHHHHHHHHHHHHHhcCCee------------------ Q lcl|Aclame:pro 545 PSPFDRINVRRLFNMVKTNIGSASKYRLFE----LNNAFTRSSFRTETSQYLQGIKALGGVY------------------ 602 (660) Q Consensus 545 ~~~~~~i~vrR~~~~i~~~~~~~~~~~v~e----pn~~~~~~~i~~~i~~~l~~l~~~gal~------------------ 602 (660) |.+|.+-+-.+|++..++..+....-. |-|..=...|+..|+.-|+.-+++|.|. T Consensus 369 ---~~wiD~~~~~~Wl~~~iq~~l~~ll~~~~kIPyt~~G~~~l~a~v~~~l~~av~nG~I~~Gv~l~~~q~~~I~~~~g 445 (501) T protein:vir:78 369 ---FLWVDTYLDQIYLNAELQRAEFEAMLAYNSLPYNEDGYTALYRAGVDVIDAAVTSGIIRAGVTLTNSQLQQIDAAAG 445 (501) T ss_pred ---ceeehhhhhHHHHHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHHHHHHHHHhCceeecCCCCCCccceeeccccC Confidence 556777777788888888888764432 5578888899999999999999999883 Q ss_pred -----------eEEEEEecCCCCHHH-hhCCEEEEEEEEEecCcceEEEEEEEEee Q lcl|Aclame:pro 603 -----------NFKVVCDTTNNTPAV-IDRNEFVATFYLQPARSINYITLNFVATA 646 (660) Q Consensus 603 -----------g~~v~~d~~~nt~~~-i~~G~~~~~i~~~p~~p~e~i~~~~~~~~ 646 (660) ||.+.++....++++ .......+.+.+.--..+++|.+-..--. T Consensus 446 ~~~~~~~~~~~Gyy~~~~~~~~~~~~R~~R~~p~~~~~y~~~gaIh~v~i~s~~v~ 501 (501) T protein:vir:78 446 VAGAGQLVQMRGWYFLIGDPANPGQARQNRTTPTCTLWYSDGGSIQELTIGSNAVI 501 (501) T ss_pred ccccccceeccceEEeeccccCChhhhhhcccCcEEEEEEeCCceeEEEeeeeecC Confidence 366666654334333 33344577777777777887766433323 Done!