Query lcl|Aclame:protein:vir:9979|NCBI_annot:hypothetical protein|genbank:acc:NP_859109;genbank:gi:32170864;genbank:GeneID:2653256 Match_columns 567 No_of_seqs 79 out of 109 Neff 5.2 Searched_HMMs 1612 Date Sat Nov 30 17:50:53 2013 Command /home/guerois/workspace/virfam/python/lib/hhsearch//hhsearch2 -i .//seq/seq_31 -d /home/guerois/workspace/virfam/python/profile_database/capsid_neck_tail.hhm -glob -cpu 7 -o .//seq/HHR/seq_31_vs_rec_db.hhr No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM 1 protein:vir:3306 Length: 567 # 100.0 2E-262 1E-265 1455.5 57.1 567 1-567 1-567 (567) 2 protein:vir:2792 Length: 567 # 100.0 2E-262 1E-265 1455.5 57.1 567 1-567 1-567 (567) 3 protein:vir:10145 Length: 567 100.0 2E-262 1E-265 1455.5 57.1 567 1-567 1-567 (567) 4 protein:vir:9979 Length: 567 # 100.0 2E-262 1E-265 1455.5 57.1 567 1-567 1-567 (567) 5 protein:vir:827 Length: 567 # 100.0 2E-262 1E-265 1455.8 56.7 567 1-567 1-567 (567) 6 protein:vir:104388 Length: 566 100.0 4E-260 3E-263 1442.4 57.0 566 2-567 1-566 (566) 7 protein:vir:93631 Length: 580 100.0 4E-211 3E-214 1173.8 53.1 514 27-567 1-579 (580) 8 protein:vir:5120 Length: 615 # 100.0 3E-208 2E-211 1158.5 51.4 536 1-567 1-613 (615) 9 protein:vir:105563 Length: 396 100.0 1E-96 6E-100 546.8 26.5 351 27-424 1-396 (396) 10 protein:vir:8837 Length: 513 # 99.2 4.2E-10 2.6E-13 72.0 37.6 421 25-563 1-513 (513) 11 protein:vir:3133 Length: 911 # 98.9 1.6E-08 1E-11 63.3 24.8 452 1-567 114-671 (911) 12 protein:vir:63741 Length: 468 98.6 1.3E-09 7.9E-13 69.4 10.7 231 1-333 219-468 (468) 13 protein:vir:80491 Length: 467 98.6 1.3E-09 8.3E-13 69.2 10.7 231 1-333 218-467 (467) 14 protein:vir:2625 Length: 715 # 98.6 2.7E-07 1.7E-10 56.6 26.2 410 1-567 137-577 (715) 15 protein:vir:95475 Length: 771 98.4 8.8E-07 5.5E-10 53.8 24.6 455 1-567 133-655 (771) 16 protein:vir:108312 Length: 458 98.2 2.4E-06 1.5E-09 51.4 32.6 389 125-566 1-458 (458) 17 protein:vir:177 Length: 472 # 98.2 2.5E-06 1.5E-09 51.3 32.1 392 138-566 1-472 (472) 18 protein:vir:107802 Length: 681 98.1 4.6E-06 2.9E-09 49.8 36.7 498 27-567 1-615 (681) 19 protein:vir:107423 Length: 681 98.1 4.6E-06 2.9E-09 49.8 36.7 498 27-567 1-615 (681) 20 protein:vir:98487 Length: 681 98.1 4.6E-06 2.9E-09 49.8 36.7 498 27-567 1-615 (681) 21 protein:vir:105428 Length: 472 97.9 1.2E-05 7.5E-09 47.6 32.1 392 138-566 1-472 (472) 22 protein:vir:96666 Length: 462 97.7 1E-06 6.3E-10 53.4 10.4 257 1-322 181-462 (462) 23 protein:vir:9268 Length: 472 # 97.4 8.8E-05 5.4E-08 42.8 34.8 393 125-563 1-472 (472) 24 protein:vir:100960 Length: 472 96.7 0.0004 2.5E-07 39.2 34.1 393 125-563 1-472 (472) 25 protein:vir:95603 Length: 463 96.1 0.00014 8.7E-08 41.7 9.3 254 1-324 181-463 (463) 26 protein:vir:99311 Length: 463 96.1 0.00014 8.7E-08 41.7 9.3 254 1-324 181-463 (463) 27 protein:vir:80835 Length: 464 96.1 0.00012 7.2E-08 42.2 8.5 284 1-326 119-464 (464) 28 protein:vir:102644 Length: 594 95.9 0.0014 8.4E-07 36.3 32.3 436 27-567 1-530 (594) 29 protein:vir:3529 Length: 477 # 95.8 0.0014 8.5E-07 36.3 32.9 398 111-563 1-477 (477) 30 protein:vir:103790 Length: 768 95.7 0.0016 9.7E-07 36.0 37.6 518 27-567 1-697 (768) 31 protein:vir:100851 Length: 514 95.5 0.0012 7.2E-07 36.7 11.7 233 1-324 237-514 (514) 32 protein:vir:105525 Length: 472 95.4 0.0021 1.3E-06 35.3 32.8 389 147-563 1-472 (472) 33 protein:vir:2109 Length: 472 # 94.6 0.004 2.5E-06 33.7 35.3 392 147-563 1-472 (472) 34 protein:vir:8887 Length: 808 # 91.5 0.015 9.5E-06 30.5 35.5 527 27-567 1-733 (808) 35 protein:vir:80253 Length: 777 90.0 0.023 1.4E-05 29.5 40.0 521 27-567 1-700 (777) 36 protein:vir:99677 Length: 794 85.4 0.053 3.3E-05 27.6 37.7 524 27-567 1-718 (794) 37 protein:vir:1543 Length: 801 # 79.9 0.1 6.2E-05 26.1 38.3 519 27-567 1-725 (801) 38 protein:vir:1778 Length: 680 # 79.3 0.11 6.5E-05 25.9 27.1 418 1-479 213-680 (680) 39 protein:vir:102823 Length: 470 79.1 0.11 6.7E-05 25.9 12.5 256 1-324 173-470 (470) 40 protein:vir:94713 Length: 785 68.7 0.23 0.00014 24.0 40.7 521 27-567 1-711 (785) 41 protein:vir:94583 Length: 792 67.4 0.25 0.00016 23.9 37.9 526 27-567 1-716 (792) 42 protein:vir:100022 Length: 976 63.7 0.31 0.00019 23.4 38.1 536 1-567 187-899 (976) 43 protein:vir:95324 Length: 823 60.8 0.37 0.00023 23.0 38.3 512 2-567 1-669 (823) 44 protein:vir:78957 Length: 826 56.4 0.46 0.00028 22.4 34.7 495 1-567 164-748 (826) 45 protein:vir:2203 Length: 794 # 48.9 0.65 0.00041 21.6 38.7 519 27-567 1-718 (794) 46 protein:vir:10452 Length: 794 47.0 0.71 0.00044 21.4 38.9 527 27-567 1-718 (794) 47 protein:vir:7329 Length: 825 # 29.6 1.6 0.001 19.4 35.2 499 2-567 1-671 (825) No 1 >protein:vir:3306 Length: 567 # NCBI annotation: hypothetical protein # Family: family:all:1544 # MgeID: mge:66 # MgeName: 933W # Cross-refs: genbank:acc:NP_049522;genbank:gi:9632528;genbank:GeneID:1262016 Probab=100.00 E-value=1.8e-262 Score=1455.53 Aligned_cols=567 Identities=100% Similarity=1.530 Sum_probs=562.1 Q ss_pred CccceeehhhhccceeeccccccceeeeEEEecccccccCccchhcCcccccceEEeeeecCCeEeEeeccccccccccc Q lcl|Aclame:pro 1 MMPIAILANSIINPLIFKPEAVKGISMPYIDITTMRGMMPRVVTSMLPEHSAVLAEDCHFRFGVITPERQISGVEKTFTI 80 (567) Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~M~~I~i~~f~G~~pr~~p~lL~~~~a~~A~N~~~~~G~l~P~~~~~~v~~~~~~ 80 (567) |||||||||||||||||||||||||+|++|+|++|+||+||++||||||++||+|+||||++|+|+|+|+|+++++.++. T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~M~~i~i~~f~Ge~Prl~p~lLP~~~a~~A~n~~~~~G~itP~~~~~~~~~~~~~ 80 (567) T protein:vir:33 1 MMPIAILANSIINPLIFKPEAVKGISMPYIDITTMRGMMPRVVTSMLPEHSAVLAEDCHFRFGVITPERQISGVEKTFTI 80 (567) T ss_pred CcchhhhhhhhccceeecccccccceeeEEeecccccccccchhhhccccccceEEeeeccCCeeeeeeccccccccccc Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred cceEEEEECCceEEeeCCeEEEeeCCCCCCCcceEEEcCCCeeeeeeccccccCCcccccccccccCCCCcccceeEecC Q lcl|Aclame:pro 81 KPKTIFHYRDDFWFAWPDVVDVIRSPIAQDPHGRIYYTDGRFPKVTDATIATKGDGNHPTSSYRLGIPAPTTAPVCTVQQ 160 (567) Q Consensus 81 ~~~Tif~~~~~~w~~w~~~V~~~~spia~D~~~Rvy~tgd~~p~~t~~~iat~g~g~~p~~~y~LgVpaP~~ap~~~v~~ 160 (567) .+||||||+++|||+|+++|||+|||||||+|+|||||||++||+++++|+++|+|.+|++||+||||+|+++|+++++. T Consensus 81 ~~~Tif~y~~~~W~~w~~~V~~ir~PvAqD~~~rvY~tgdg~Pk~t~~~iat~G~~~~P~~~y~LgVpaps~aP~~a~~~ 160 (567) T protein:vir:33 81 KPKTIFHYRDDFWFAWPDVVDVIRSPIAQDPHGRIYYTDGRFPKVTDATIATKGDGNHPTSSYRLGIPAPTTAPVCTVQQ 160 (567) T ss_pred CceeeEEEcCcEEEEeCCceeeccCccccCCcceEEEecCCcceeeeeeeeecCCCCCCcchhhcccCCccccceeeecC Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred CCCCCCCccccceeeEEEEEEEecCCCccCCcccceeEEEecCCCEEEEccccCCCCCCccceEEEEEEEcCCCCeeEEE Q lcl|Aclame:pro 161 GGDVSDDNPNDDETRFYTETFVSDYGEEGPPGPASLEVTLRTPGTAVQLTLAPVPLQNASIKRRRIYRSASGGGEADFLL 240 (567) Q Consensus 161 g~~~~g~~~~d~et~~Y~~TfVt~~GeES~pS~~S~~v~v~~~g~~V~L~~~p~~~~~~~it~~RIYRs~tggg~~e~~l 240 (567) ++..+++.+.|+++|+|+|||||++||||+||++|..+++..+|+.|+|+++|+++++++|+++|||||++|++++||+| T Consensus 161 ~~~~~~~~~~d~etr~Yv~TfVt~~GeES~PS~~S~~~~v~~pg~~V~ls~~p~~~~~~~i~~~RIYRS~tg~~gtdy~l 240 (567) T protein:vir:33 161 GGDVSDDNPNDDETRFYTETFVSDYGEEGPPGPASLEVTLRTPGTAVQLTLAPVPLQNASIKRRRIYRSASGGGEADFLL 240 (567) T ss_pred CCCCCCCCCcccceeEEEEEEEcCCCCcCCCcccccceeeecCCceEEEeeccCCccccccceEEEEEecCCCCceeeEE Confidence 99999999999999999999999999999999999999999899999999999999999999999999999999999999 Q ss_pred EEeccCceeeEEeccCccccCcccchhhccCCCCCCceeeeecCcEEEEEECCEEEEecCCCcccCchhhceecccceEE Q lcl|Aclame:pro 241 VAELDASVLSYTDKIPAKNLGPSLATWDYLPPPENMTGLCLMANGIAAGFAGNEVMFSEAYLPYAWPEVNRHTTAEDIVA 320 (567) Q Consensus 241 Vael~~st~sy~D~~~~~~Lg~~L~t~~~~~Pp~~~~~l~~~~NG~l~~a~Gn~l~FSEp~~Phawp~~y~~~~~~~Iv~ 320 (567) |||+++++++|+|++++++||++|+|++|++||++|+|||+|+||||++|.||+|||||||+|||||++|+++++++||| T Consensus 241 Vael~as~~sf~D~~~~~~lg~~Lps~~w~~PP~~m~GL~~m~NGimAgF~GneV~FsEpylPyAWP~~Yr~t~~~dIVa 320 (567) T protein:vir:33 241 VAELDASVLSYTDKIPAKNLGPSLATWDYLPPPENMTGLCLMANGIAAGFAGNEVMFSEAYLPYAWPEVNRHTTAEDIVA 320 (567) T ss_pred EEeeccceeeeeeccchhhcccccccccccCcCcccceeeecccceEEeecCCEEEEecCCCCcccchhhccCCCCCeEE Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred EEEeCCeEEEEEcCcEEEEEcCCcccceeEeecccCCcccccceeecCceEEEecCCcEEEEcCCceeEeecccccchhH Q lcl|Aclame:pro 321 ICPLGTSLVVATKGEPYLFSGVSPSTISGSKIPSMQACLSRRSMVAMEGFVLYAGTNGLVSVDANGNVALATEQIVSPEQ 400 (567) Q Consensus 321 i~pv~~gl~V~T~~~py~lsG~~p~~m~~~~l~~~~pcvs~~siv~~~~~v~y~s~dGlv~~~~~G~~~~vt~~~~~~~~ 400 (567) |++++++|||+|+|+||+++|++|++|+++||+.+|||+|+||||+++++|+|+|+||||+++++|+++++|+++|+||| T Consensus 321 iA~~gt~LVV~TkG~PYl~sG~sP~sms~~kL~~~qpCvS~rsiV~~~g~v~Yas~dGLv~i~a~G~a~vvT~~l~t~~q 400 (567) T protein:vir:33 321 ICPLGTSLVVATKGEPYLFSGVSPSTISGSKIPSMQACLSRRSMVAMEGFVLYAGTNGLVSVDANGNVALATEQIVSPEQ 400 (567) T ss_pred EeecccEEEEEEcCceEEEEcCChhhccccccccccccccccceeEeccEEEeecCCcEEEEecCCchhhhhhhccChHH Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred HhhhcCcccEEEEEEcCeEEEEEecCCCcceeEEEccCCceeEEEeeeeeEEEEEecCCeEEEEeCCEEEEEcCCCCcee Q lcl|Aclame:pro 401 WQSQFNPASIVAYPWRGEYIACYTKPDGKQDVFVFSPVNMDIRYLSTPFDCAWVDLAKDMMRVVTGDKMSVLAGGALPST 480 (567) Q Consensus 401 W~~~l~P~ti~a~~~~G~Y~~~y~~~~g~~~~~ifd~~~~~~~~~~~~~~a~~~~~~~d~ly~~~g~~i~~~~~g~~~~~ 480 (567) ||++|||+||+|++|||+||+||++.+|++++|||||.++++++++++|||+|+|..+|+||+++|++||+|++|+++++ T Consensus 401 W~a~~~P~ti~A~~~eG~Y~a~Y~~~~g~~~~fifdp~~~~~~~i~~~~~~~~~d~~~d~Ly~~~~~~l~~~~~g~~~~~ 480 (567) T protein:vir:33 401 WQSQFNPASIVAYPWRGEYIACYTKPDGKQDVFVFSPVNMDIRYLSTPFDCAWVDLAKDMMRVVTGDKMSVLAGGALPST 480 (567) T ss_pred HHhcCCcceEEEEeecCeEEEEEecCCCCcceEEEcccccEEEEEecCceeEEEEeecCeEEEeeCCEEeeecCCCCcee Confidence 99889999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred EEEEeeeEEcCCCCceeEEEEeeCCcCceEEEEEECCeeeEeecCcccCCcceEcCCcccceEEEEEEecceEEEEEeec Q lcl|Aclame:pro 481 IRWHSKIFSLPERTSFSCIRVKSPAPERVGITIMADDVPVIHFAPGTFKGSVVRLPAATGQNWQVMVSGFGQVERITLST 560 (567) Q Consensus 481 ~~WrSK~f~~~~~~~f~~~~V~~~~~~~~~~~i~~d~~~~~~~~~~~~~~~~~RLP~~~~~~wqiei~g~~~V~~i~la~ 560 (567) ++||||+|.+|+++||+|+||++.+.++++|++++||..++++++++.+++++|||++++|+|||||+|+++|++|+||+ T Consensus 481 ~~WrSK~f~~p~~~sf~~~rV~s~~~~~v~i~~~~dg~~v~~~~~g~~~~~~~rlp~~~ar~Weveisg~~~V~~v~LA~ 560 (567) T protein:vir:33 481 IRWHSKIFSLPERTSFSCIRVKSPAPERVGITIMADDVPVIHFAPGTFKGSVVRLPAATGQNWQVMVSGFGQVERITLST 560 (567) T ss_pred EEEecceEEecCccceeEEEEeccCCcceeEEEEEcCCceeecCCccccCceeecCCcccceEEEEEEecccEEEEEEec Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred chhhhcC Q lcl|Aclame:pro 561 SMSEMPV 567 (567) Q Consensus 561 s~~EL~~ 567 (567) ||+|||| T Consensus 561 S~~EL~~ 567 (567) T protein:vir:33 561 SMSEMPV 567 (567) T ss_pred chhhcCC Confidence 9999999 No 2 >protein:vir:2792 Length: 567 # NCBI annotation: hypothetical protein # Family: family:all:1544 # MgeID: mge:59 # MgeName: Stx2 converting bacteriophage I # Cross-refs: genbank:acc:NP_612909;genbank:gi:20065826;genbank:GeneID:935648 Probab=100.00 E-value=1.8e-262 Score=1455.53 Aligned_cols=567 Identities=100% Similarity=1.530 Sum_probs=562.1 Q ss_pred CccceeehhhhccceeeccccccceeeeEEEecccccccCccchhcCcccccceEEeeeecCCeEeEeeccccccccccc Q lcl|Aclame:pro 1 MMPIAILANSIINPLIFKPEAVKGISMPYIDITTMRGMMPRVVTSMLPEHSAVLAEDCHFRFGVITPERQISGVEKTFTI 80 (567) Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~M~~I~i~~f~G~~pr~~p~lL~~~~a~~A~N~~~~~G~l~P~~~~~~v~~~~~~ 80 (567) |||||||||||||||||||||||||+|++|+|++|+||+||++||||||++||+|+||||++|+|+|+|+|+++++.++. T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~M~~i~i~~f~Ge~Prl~p~lLP~~~a~~A~n~~~~~G~itP~~~~~~~~~~~~~ 80 (567) T protein:vir:27 1 MMPIAILANSIINPLIFKPEAVKGISMPYIDITTMRGMMPRVVTSMLPEHSAVLAEDCHFRFGVITPERQISGVEKTFTI 80 (567) T ss_pred CcchhhhhhhhccceeecccccccceeeEEeecccccccccchhhhccccccceEEeeeccCCeeeeeeccccccccccc Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred cceEEEEECCceEEeeCCeEEEeeCCCCCCCcceEEEcCCCeeeeeeccccccCCcccccccccccCCCCcccceeEecC Q lcl|Aclame:pro 81 KPKTIFHYRDDFWFAWPDVVDVIRSPIAQDPHGRIYYTDGRFPKVTDATIATKGDGNHPTSSYRLGIPAPTTAPVCTVQQ 160 (567) Q Consensus 81 ~~~Tif~~~~~~w~~w~~~V~~~~spia~D~~~Rvy~tgd~~p~~t~~~iat~g~g~~p~~~y~LgVpaP~~ap~~~v~~ 160 (567) .+||||||+++|||+|+++|||+|||||||+|+|||||||++||+++++|+++|+|.+|++||+||||+|+++|+++++. T Consensus 81 ~~~Tif~y~~~~W~~w~~~V~~ir~PvAqD~~~rvY~tgdg~Pk~t~~~iat~G~~~~P~~~y~LgVpaps~aP~~a~~~ 160 (567) T protein:vir:27 81 KPKTIFHYRDDFWFAWPDVVDVIRSPIAQDPHGRIYYTDGRFPKVTDATIATKGDGNHPTSSYRLGIPAPTTAPVCTVQQ 160 (567) T ss_pred CceeeEEEcCcEEEEeCCceeeccCccccCCcceEEEecCCcceeeeeeeeecCCCCCCcchhhcccCCccccceeeecC Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred CCCCCCCccccceeeEEEEEEEecCCCccCCcccceeEEEecCCCEEEEccccCCCCCCccceEEEEEEEcCCCCeeEEE Q lcl|Aclame:pro 161 GGDVSDDNPNDDETRFYTETFVSDYGEEGPPGPASLEVTLRTPGTAVQLTLAPVPLQNASIKRRRIYRSASGGGEADFLL 240 (567) Q Consensus 161 g~~~~g~~~~d~et~~Y~~TfVt~~GeES~pS~~S~~v~v~~~g~~V~L~~~p~~~~~~~it~~RIYRs~tggg~~e~~l 240 (567) ++..+++.+.|+++|+|+|||||++||||+||++|..+++..+|+.|+|+++|+++++++|+++|||||++|++++||+| T Consensus 161 ~~~~~~~~~~d~etr~Yv~TfVt~~GeES~PS~~S~~~~v~~pg~~V~ls~~p~~~~~~~i~~~RIYRS~tg~~gtdy~l 240 (567) T protein:vir:27 161 GGDVSDDNPNDDETRFYTETFVSDYGEEGPPGPASLEVTLRTPGTAVQLTLAPVPLQNASIKRRRIYRSASGGGEADFLL 240 (567) T ss_pred CCCCCCCCCcccceeEEEEEEEcCCCCcCCCcccccceeeecCCceEEEeeccCCccccccceEEEEEecCCCCceeeEE Confidence 99999999999999999999999999999999999999999899999999999999999999999999999999999999 Q ss_pred EEeccCceeeEEeccCccccCcccchhhccCCCCCCceeeeecCcEEEEEECCEEEEecCCCcccCchhhceecccceEE Q lcl|Aclame:pro 241 VAELDASVLSYTDKIPAKNLGPSLATWDYLPPPENMTGLCLMANGIAAGFAGNEVMFSEAYLPYAWPEVNRHTTAEDIVA 320 (567) Q Consensus 241 Vael~~st~sy~D~~~~~~Lg~~L~t~~~~~Pp~~~~~l~~~~NG~l~~a~Gn~l~FSEp~~Phawp~~y~~~~~~~Iv~ 320 (567) |||+++++++|+|++++++||++|+|++|++||++|+|||+|+||||++|.||+|||||||+|||||++|+++++++||| T Consensus 241 Vael~as~~sf~D~~~~~~lg~~Lps~~w~~PP~~m~GL~~m~NGimAgF~GneV~FsEpylPyAWP~~Yr~t~~~dIVa 320 (567) T protein:vir:27 241 VAELDASVLSYTDKIPAKNLGPSLATWDYLPPPENMTGLCLMANGIAAGFAGNEVMFSEAYLPYAWPEVNRHTTAEDIVA 320 (567) T ss_pred EEeeccceeeeeeccchhhcccccccccccCcCcccceeeecccceEEeecCCEEEEecCCCCcccchhhccCCCCCeEE Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred EEEeCCeEEEEEcCcEEEEEcCCcccceeEeecccCCcccccceeecCceEEEecCCcEEEEcCCceeEeecccccchhH Q lcl|Aclame:pro 321 ICPLGTSLVVATKGEPYLFSGVSPSTISGSKIPSMQACLSRRSMVAMEGFVLYAGTNGLVSVDANGNVALATEQIVSPEQ 400 (567) Q Consensus 321 i~pv~~gl~V~T~~~py~lsG~~p~~m~~~~l~~~~pcvs~~siv~~~~~v~y~s~dGlv~~~~~G~~~~vt~~~~~~~~ 400 (567) |++++++|||+|+|+||+++|++|++|+++||+.+|||+|+||||+++++|+|+|+||||+++++|+++++|+++|+||| T Consensus 321 iA~~gt~LVV~TkG~PYl~sG~sP~sms~~kL~~~qpCvS~rsiV~~~g~v~Yas~dGLv~i~a~G~a~vvT~~l~t~~q 400 (567) T protein:vir:27 321 ICPLGTSLVVATKGEPYLFSGVSPSTISGSKIPSMQACLSRRSMVAMEGFVLYAGTNGLVSVDANGNVALATEQIVSPEQ 400 (567) T ss_pred EeecccEEEEEEcCceEEEEcCChhhccccccccccccccccceeEeccEEEeecCCcEEEEecCCchhhhhhhccChHH Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred HhhhcCcccEEEEEEcCeEEEEEecCCCcceeEEEccCCceeEEEeeeeeEEEEEecCCeEEEEeCCEEEEEcCCCCcee Q lcl|Aclame:pro 401 WQSQFNPASIVAYPWRGEYIACYTKPDGKQDVFVFSPVNMDIRYLSTPFDCAWVDLAKDMMRVVTGDKMSVLAGGALPST 480 (567) Q Consensus 401 W~~~l~P~ti~a~~~~G~Y~~~y~~~~g~~~~~ifd~~~~~~~~~~~~~~a~~~~~~~d~ly~~~g~~i~~~~~g~~~~~ 480 (567) ||++|||+||+|++|||+||+||++.+|++++|||||.++++++++++|||+|+|..+|+||+++|++||+|++|+++++ T Consensus 401 W~a~~~P~ti~A~~~eG~Y~a~Y~~~~g~~~~fifdp~~~~~~~i~~~~~~~~~d~~~d~Ly~~~~~~l~~~~~g~~~~~ 480 (567) T protein:vir:27 401 WQSQFNPASIVAYPWRGEYIACYTKPDGKQDVFVFSPVNMDIRYLSTPFDCAWVDLAKDMMRVVTGDKMSVLAGGALPST 480 (567) T ss_pred HHhcCCcceEEEEeecCeEEEEEecCCCCcceEEEcccccEEEEEecCceeEEEEeecCeEEEeeCCEEeeecCCCCcee Confidence 99889999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred EEEEeeeEEcCCCCceeEEEEeeCCcCceEEEEEECCeeeEeecCcccCCcceEcCCcccceEEEEEEecceEEEEEeec Q lcl|Aclame:pro 481 IRWHSKIFSLPERTSFSCIRVKSPAPERVGITIMADDVPVIHFAPGTFKGSVVRLPAATGQNWQVMVSGFGQVERITLST 560 (567) Q Consensus 481 ~~WrSK~f~~~~~~~f~~~~V~~~~~~~~~~~i~~d~~~~~~~~~~~~~~~~~RLP~~~~~~wqiei~g~~~V~~i~la~ 560 (567) ++||||+|.+|+++||+|+||++.+.++++|++++||..++++++++.+++++|||++++|+|||||+|+++|++|+||+ T Consensus 481 ~~WrSK~f~~p~~~sf~~~rV~s~~~~~v~i~~~~dg~~v~~~~~g~~~~~~~rlp~~~ar~Weveisg~~~V~~v~LA~ 560 (567) T protein:vir:27 481 IRWHSKIFSLPERTSFSCIRVKSPAPERVGITIMADDVPVIHFAPGTFKGSVVRLPAATGQNWQVMVSGFGQVERITLST 560 (567) T ss_pred EEEecceEEecCccceeEEEEeccCCcceeEEEEEcCCceeecCCccccCceeecCCcccceEEEEEEecccEEEEEEec Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred chhhhcC Q lcl|Aclame:pro 561 SMSEMPV 567 (567) Q Consensus 561 s~~EL~~ 567 (567) ||+|||| T Consensus 561 S~~EL~~ 567 (567) T protein:vir:27 561 SMSEMPV 567 (567) T ss_pred chhhcCC Confidence 9999999 No 3 >protein:vir:10145 Length: 567 # NCBI annotation: hypothetical protein # Family: family:all:1544 # MgeID: mge:180 # MgeName: Stx2 converting bacteriophage II # Cross-refs: genbank:acc:NP_859275;genbank:gi:32171031;genbank:GeneID:2653447 Probab=100.00 E-value=1.8e-262 Score=1455.53 Aligned_cols=567 Identities=100% Similarity=1.530 Sum_probs=562.1 Q ss_pred CccceeehhhhccceeeccccccceeeeEEEecccccccCccchhcCcccccceEEeeeecCCeEeEeeccccccccccc Q lcl|Aclame:pro 1 MMPIAILANSIINPLIFKPEAVKGISMPYIDITTMRGMMPRVVTSMLPEHSAVLAEDCHFRFGVITPERQISGVEKTFTI 80 (567) Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~M~~I~i~~f~G~~pr~~p~lL~~~~a~~A~N~~~~~G~l~P~~~~~~v~~~~~~ 80 (567) |||||||||||||||||||||||||+|++|+|++|+||+||++||||||++||+|+||||++|+|+|+|+|+++++.++. T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~M~~i~i~~f~Ge~Prl~p~lLP~~~a~~A~n~~~~~G~itP~~~~~~~~~~~~~ 80 (567) T protein:vir:10 1 MMPIAILANSIINPLIFKPEAVKGISMPYIDITTMRGMMPRVVTSMLPEHSAVLAEDCHFRFGVITPERQISGVEKTFTI 80 (567) T ss_pred CcchhhhhhhhccceeecccccccceeeEEeecccccccccchhhhccccccceEEeeeccCCeeeeeeccccccccccc Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred cceEEEEECCceEEeeCCeEEEeeCCCCCCCcceEEEcCCCeeeeeeccccccCCcccccccccccCCCCcccceeEecC Q lcl|Aclame:pro 81 KPKTIFHYRDDFWFAWPDVVDVIRSPIAQDPHGRIYYTDGRFPKVTDATIATKGDGNHPTSSYRLGIPAPTTAPVCTVQQ 160 (567) Q Consensus 81 ~~~Tif~~~~~~w~~w~~~V~~~~spia~D~~~Rvy~tgd~~p~~t~~~iat~g~g~~p~~~y~LgVpaP~~ap~~~v~~ 160 (567) .+||||||+++|||+|+++|||+|||||||+|+|||||||++||+++++|+++|+|.+|++||+||||+|+++|+++++. T Consensus 81 ~~~Tif~y~~~~W~~w~~~V~~ir~PvAqD~~~rvY~tgdg~Pk~t~~~iat~G~~~~P~~~y~LgVpaps~aP~~a~~~ 160 (567) T protein:vir:10 81 KPKTIFHYRDDFWFAWPDVVDVIRSPIAQDPHGRIYYTDGRFPKVTDATIATKGDGNHPTSSYRLGIPAPTTAPVCTVQQ 160 (567) T ss_pred CceeeEEEcCcEEEEeCCceeeccCccccCCcceEEEecCCcceeeeeeeeecCCCCCCcchhhcccCCccccceeeecC Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred CCCCCCCccccceeeEEEEEEEecCCCccCCcccceeEEEecCCCEEEEccccCCCCCCccceEEEEEEEcCCCCeeEEE Q lcl|Aclame:pro 161 GGDVSDDNPNDDETRFYTETFVSDYGEEGPPGPASLEVTLRTPGTAVQLTLAPVPLQNASIKRRRIYRSASGGGEADFLL 240 (567) Q Consensus 161 g~~~~g~~~~d~et~~Y~~TfVt~~GeES~pS~~S~~v~v~~~g~~V~L~~~p~~~~~~~it~~RIYRs~tggg~~e~~l 240 (567) ++..+++.+.|+++|+|+|||||++||||+||++|..+++..+|+.|+|+++|+++++++|+++|||||++|++++||+| T Consensus 161 ~~~~~~~~~~d~etr~Yv~TfVt~~GeES~PS~~S~~~~v~~pg~~V~ls~~p~~~~~~~i~~~RIYRS~tg~~gtdy~l 240 (567) T protein:vir:10 161 GGDVSDDNPNDDETRFYTETFVSDYGEEGPPGPASLEVTLRTPGTAVQLTLAPVPLQNASIKRRRIYRSASGGGEADFLL 240 (567) T ss_pred CCCCCCCCCcccceeEEEEEEEcCCCCcCCCcccccceeeecCCceEEEeeccCCccccccceEEEEEecCCCCceeeEE Confidence 99999999999999999999999999999999999999999899999999999999999999999999999999999999 Q ss_pred EEeccCceeeEEeccCccccCcccchhhccCCCCCCceeeeecCcEEEEEECCEEEEecCCCcccCchhhceecccceEE Q lcl|Aclame:pro 241 VAELDASVLSYTDKIPAKNLGPSLATWDYLPPPENMTGLCLMANGIAAGFAGNEVMFSEAYLPYAWPEVNRHTTAEDIVA 320 (567) Q Consensus 241 Vael~~st~sy~D~~~~~~Lg~~L~t~~~~~Pp~~~~~l~~~~NG~l~~a~Gn~l~FSEp~~Phawp~~y~~~~~~~Iv~ 320 (567) |||+++++++|+|++++++||++|+|++|++||++|+|||+|+||||++|.||+|||||||+|||||++|+++++++||| T Consensus 241 Vael~as~~sf~D~~~~~~lg~~Lps~~w~~PP~~m~GL~~m~NGimAgF~GneV~FsEpylPyAWP~~Yr~t~~~dIVa 320 (567) T protein:vir:10 241 VAELDASVLSYTDKIPAKNLGPSLATWDYLPPPENMTGLCLMANGIAAGFAGNEVMFSEAYLPYAWPEVNRHTTAEDIVA 320 (567) T ss_pred EEeeccceeeeeeccchhhcccccccccccCcCcccceeeecccceEEeecCCEEEEecCCCCcccchhhccCCCCCeEE Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred EEEeCCeEEEEEcCcEEEEEcCCcccceeEeecccCCcccccceeecCceEEEecCCcEEEEcCCceeEeecccccchhH Q lcl|Aclame:pro 321 ICPLGTSLVVATKGEPYLFSGVSPSTISGSKIPSMQACLSRRSMVAMEGFVLYAGTNGLVSVDANGNVALATEQIVSPEQ 400 (567) Q Consensus 321 i~pv~~gl~V~T~~~py~lsG~~p~~m~~~~l~~~~pcvs~~siv~~~~~v~y~s~dGlv~~~~~G~~~~vt~~~~~~~~ 400 (567) |++++++|||+|+|+||+++|++|++|+++||+.+|||+|+||||+++++|+|+|+||||+++++|+++++|+++|+||| T Consensus 321 iA~~gt~LVV~TkG~PYl~sG~sP~sms~~kL~~~qpCvS~rsiV~~~g~v~Yas~dGLv~i~a~G~a~vvT~~l~t~~q 400 (567) T protein:vir:10 321 ICPLGTSLVVATKGEPYLFSGVSPSTISGSKIPSMQACLSRRSMVAMEGFVLYAGTNGLVSVDANGNVALATEQIVSPEQ 400 (567) T ss_pred EeecccEEEEEEcCceEEEEcCChhhccccccccccccccccceeEeccEEEeecCCcEEEEecCCchhhhhhhccChHH Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred HhhhcCcccEEEEEEcCeEEEEEecCCCcceeEEEccCCceeEEEeeeeeEEEEEecCCeEEEEeCCEEEEEcCCCCcee Q lcl|Aclame:pro 401 WQSQFNPASIVAYPWRGEYIACYTKPDGKQDVFVFSPVNMDIRYLSTPFDCAWVDLAKDMMRVVTGDKMSVLAGGALPST 480 (567) Q Consensus 401 W~~~l~P~ti~a~~~~G~Y~~~y~~~~g~~~~~ifd~~~~~~~~~~~~~~a~~~~~~~d~ly~~~g~~i~~~~~g~~~~~ 480 (567) ||++|||+||+|++|||+||+||++.+|++++|||||.++++++++++|||+|+|..+|+||+++|++||+|++|+++++ T Consensus 401 W~a~~~P~ti~A~~~eG~Y~a~Y~~~~g~~~~fifdp~~~~~~~i~~~~~~~~~d~~~d~Ly~~~~~~l~~~~~g~~~~~ 480 (567) T protein:vir:10 401 WQSQFNPASIVAYPWRGEYIACYTKPDGKQDVFVFSPVNMDIRYLSTPFDCAWVDLAKDMMRVVTGDKMSVLAGGALPST 480 (567) T ss_pred HHhcCCcceEEEEeecCeEEEEEecCCCCcceEEEcccccEEEEEecCceeEEEEeecCeEEEeeCCEEeeecCCCCcee Confidence 99889999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred EEEEeeeEEcCCCCceeEEEEeeCCcCceEEEEEECCeeeEeecCcccCCcceEcCCcccceEEEEEEecceEEEEEeec Q lcl|Aclame:pro 481 IRWHSKIFSLPERTSFSCIRVKSPAPERVGITIMADDVPVIHFAPGTFKGSVVRLPAATGQNWQVMVSGFGQVERITLST 560 (567) Q Consensus 481 ~~WrSK~f~~~~~~~f~~~~V~~~~~~~~~~~i~~d~~~~~~~~~~~~~~~~~RLP~~~~~~wqiei~g~~~V~~i~la~ 560 (567) ++||||+|.+|+++||+|+||++.+.++++|++++||..++++++++.+++++|||++++|+|||||+|+++|++|+||+ T Consensus 481 ~~WrSK~f~~p~~~sf~~~rV~s~~~~~v~i~~~~dg~~v~~~~~g~~~~~~~rlp~~~ar~Weveisg~~~V~~v~LA~ 560 (567) T protein:vir:10 481 IRWHSKIFSLPERTSFSCIRVKSPAPERVGITIMADDVPVIHFAPGTFKGSVVRLPAATGQNWQVMVSGFGQVERITLST 560 (567) T ss_pred EEEecceEEecCccceeEEEEeccCCcceeEEEEEcCCceeecCCccccCceeecCCcccceEEEEEEecccEEEEEEec Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred chhhhcC Q lcl|Aclame:pro 561 SMSEMPV 567 (567) Q Consensus 561 s~~EL~~ 567 (567) ||+|||| T Consensus 561 S~~EL~~ 567 (567) T protein:vir:10 561 SMSEMPV 567 (567) T ss_pred chhhcCC Confidence 9999999 No 4 >protein:vir:9979 Length: 567 # NCBI annotation: hypothetical protein # Family: family:all:1544 # MgeID: mge:179 # MgeName: Stx1 converting bacteriophage # Cross-refs: genbank:acc:NP_859109;genbank:gi:32170864;genbank:GeneID:2653256 Probab=100.00 E-value=1.8e-262 Score=1455.53 Aligned_cols=567 Identities=100% Similarity=1.530 Sum_probs=562.1 Q ss_pred CccceeehhhhccceeeccccccceeeeEEEecccccccCccchhcCcccccceEEeeeecCCeEeEeeccccccccccc Q lcl|Aclame:pro 1 MMPIAILANSIINPLIFKPEAVKGISMPYIDITTMRGMMPRVVTSMLPEHSAVLAEDCHFRFGVITPERQISGVEKTFTI 80 (567) Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~M~~I~i~~f~G~~pr~~p~lL~~~~a~~A~N~~~~~G~l~P~~~~~~v~~~~~~ 80 (567) |||||||||||||||||||||||||+|++|+|++|+||+||++||||||++||+|+||||++|+|+|+|+|+++++.++. T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~M~~i~i~~f~Ge~Prl~p~lLP~~~a~~A~n~~~~~G~itP~~~~~~~~~~~~~ 80 (567) T protein:vir:99 1 MMPIAILANSIINPLIFKPEAVKGISMPYIDITTMRGMMPRVVTSMLPEHSAVLAEDCHFRFGVITPERQISGVEKTFTI 80 (567) T ss_pred CcchhhhhhhhccceeecccccccceeeEEeecccccccccchhhhccccccceEEeeeccCCeeeeeeccccccccccc Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred cceEEEEECCceEEeeCCeEEEeeCCCCCCCcceEEEcCCCeeeeeeccccccCCcccccccccccCCCCcccceeEecC Q lcl|Aclame:pro 81 KPKTIFHYRDDFWFAWPDVVDVIRSPIAQDPHGRIYYTDGRFPKVTDATIATKGDGNHPTSSYRLGIPAPTTAPVCTVQQ 160 (567) Q Consensus 81 ~~~Tif~~~~~~w~~w~~~V~~~~spia~D~~~Rvy~tgd~~p~~t~~~iat~g~g~~p~~~y~LgVpaP~~ap~~~v~~ 160 (567) .+||||||+++|||+|+++|||+|||||||+|+|||||||++||+++++|+++|+|.+|++||+||||+|+++|+++++. T Consensus 81 ~~~Tif~y~~~~W~~w~~~V~~ir~PvAqD~~~rvY~tgdg~Pk~t~~~iat~G~~~~P~~~y~LgVpaps~aP~~a~~~ 160 (567) T protein:vir:99 81 KPKTIFHYRDDFWFAWPDVVDVIRSPIAQDPHGRIYYTDGRFPKVTDATIATKGDGNHPTSSYRLGIPAPTTAPVCTVQQ 160 (567) T ss_pred CceeeEEEcCcEEEEeCCceeeccCccccCCcceEEEecCCcceeeeeeeeecCCCCCCcchhhcccCCccccceeeecC Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred CCCCCCCccccceeeEEEEEEEecCCCccCCcccceeEEEecCCCEEEEccccCCCCCCccceEEEEEEEcCCCCeeEEE Q lcl|Aclame:pro 161 GGDVSDDNPNDDETRFYTETFVSDYGEEGPPGPASLEVTLRTPGTAVQLTLAPVPLQNASIKRRRIYRSASGGGEADFLL 240 (567) Q Consensus 161 g~~~~g~~~~d~et~~Y~~TfVt~~GeES~pS~~S~~v~v~~~g~~V~L~~~p~~~~~~~it~~RIYRs~tggg~~e~~l 240 (567) ++..+++.+.|+++|+|+|||||++||||+||++|..+++..+|+.|+|+++|+++++++|+++|||||++|++++||+| T Consensus 161 ~~~~~~~~~~d~etr~Yv~TfVt~~GeES~PS~~S~~~~v~~pg~~V~ls~~p~~~~~~~i~~~RIYRS~tg~~gtdy~l 240 (567) T protein:vir:99 161 GGDVSDDNPNDDETRFYTETFVSDYGEEGPPGPASLEVTLRTPGTAVQLTLAPVPLQNASIKRRRIYRSASGGGEADFLL 240 (567) T ss_pred CCCCCCCCCcccceeEEEEEEEcCCCCcCCCcccccceeeecCCceEEEeeccCCccccccceEEEEEecCCCCceeeEE Confidence 99999999999999999999999999999999999999999899999999999999999999999999999999999999 Q ss_pred EEeccCceeeEEeccCccccCcccchhhccCCCCCCceeeeecCcEEEEEECCEEEEecCCCcccCchhhceecccceEE Q lcl|Aclame:pro 241 VAELDASVLSYTDKIPAKNLGPSLATWDYLPPPENMTGLCLMANGIAAGFAGNEVMFSEAYLPYAWPEVNRHTTAEDIVA 320 (567) Q Consensus 241 Vael~~st~sy~D~~~~~~Lg~~L~t~~~~~Pp~~~~~l~~~~NG~l~~a~Gn~l~FSEp~~Phawp~~y~~~~~~~Iv~ 320 (567) |||+++++++|+|++++++||++|+|++|++||++|+|||+|+||||++|.||+|||||||+|||||++|+++++++||| T Consensus 241 Vael~as~~sf~D~~~~~~lg~~Lps~~w~~PP~~m~GL~~m~NGimAgF~GneV~FsEpylPyAWP~~Yr~t~~~dIVa 320 (567) T protein:vir:99 241 VAELDASVLSYTDKIPAKNLGPSLATWDYLPPPENMTGLCLMANGIAAGFAGNEVMFSEAYLPYAWPEVNRHTTAEDIVA 320 (567) T ss_pred EEeeccceeeeeeccchhhcccccccccccCcCcccceeeecccceEEeecCCEEEEecCCCCcccchhhccCCCCCeEE Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred EEEeCCeEEEEEcCcEEEEEcCCcccceeEeecccCCcccccceeecCceEEEecCCcEEEEcCCceeEeecccccchhH Q lcl|Aclame:pro 321 ICPLGTSLVVATKGEPYLFSGVSPSTISGSKIPSMQACLSRRSMVAMEGFVLYAGTNGLVSVDANGNVALATEQIVSPEQ 400 (567) Q Consensus 321 i~pv~~gl~V~T~~~py~lsG~~p~~m~~~~l~~~~pcvs~~siv~~~~~v~y~s~dGlv~~~~~G~~~~vt~~~~~~~~ 400 (567) |++++++|||+|+|+||+++|++|++|+++||+.+|||+|+||||+++++|+|+|+||||+++++|+++++|+++|+||| T Consensus 321 iA~~gt~LVV~TkG~PYl~sG~sP~sms~~kL~~~qpCvS~rsiV~~~g~v~Yas~dGLv~i~a~G~a~vvT~~l~t~~q 400 (567) T protein:vir:99 321 ICPLGTSLVVATKGEPYLFSGVSPSTISGSKIPSMQACLSRRSMVAMEGFVLYAGTNGLVSVDANGNVALATEQIVSPEQ 400 (567) T ss_pred EeecccEEEEEEcCceEEEEcCChhhccccccccccccccccceeEeccEEEeecCCcEEEEecCCchhhhhhhccChHH Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred HhhhcCcccEEEEEEcCeEEEEEecCCCcceeEEEccCCceeEEEeeeeeEEEEEecCCeEEEEeCCEEEEEcCCCCcee Q lcl|Aclame:pro 401 WQSQFNPASIVAYPWRGEYIACYTKPDGKQDVFVFSPVNMDIRYLSTPFDCAWVDLAKDMMRVVTGDKMSVLAGGALPST 480 (567) Q Consensus 401 W~~~l~P~ti~a~~~~G~Y~~~y~~~~g~~~~~ifd~~~~~~~~~~~~~~a~~~~~~~d~ly~~~g~~i~~~~~g~~~~~ 480 (567) ||++|||+||+|++|||+||+||++.+|++++|||||.++++++++++|||+|+|..+|+||+++|++||+|++|+++++ T Consensus 401 W~a~~~P~ti~A~~~eG~Y~a~Y~~~~g~~~~fifdp~~~~~~~i~~~~~~~~~d~~~d~Ly~~~~~~l~~~~~g~~~~~ 480 (567) T protein:vir:99 401 WQSQFNPASIVAYPWRGEYIACYTKPDGKQDVFVFSPVNMDIRYLSTPFDCAWVDLAKDMMRVVTGDKMSVLAGGALPST 480 (567) T ss_pred HHhcCCcceEEEEeecCeEEEEEecCCCCcceEEEcccccEEEEEecCceeEEEEeecCeEEEeeCCEEeeecCCCCcee Confidence 99889999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred EEEEeeeEEcCCCCceeEEEEeeCCcCceEEEEEECCeeeEeecCcccCCcceEcCCcccceEEEEEEecceEEEEEeec Q lcl|Aclame:pro 481 IRWHSKIFSLPERTSFSCIRVKSPAPERVGITIMADDVPVIHFAPGTFKGSVVRLPAATGQNWQVMVSGFGQVERITLST 560 (567) Q Consensus 481 ~~WrSK~f~~~~~~~f~~~~V~~~~~~~~~~~i~~d~~~~~~~~~~~~~~~~~RLP~~~~~~wqiei~g~~~V~~i~la~ 560 (567) ++||||+|.+|+++||+|+||++.+.++++|++++||..++++++++.+++++|||++++|+|||||+|+++|++|+||+ T Consensus 481 ~~WrSK~f~~p~~~sf~~~rV~s~~~~~v~i~~~~dg~~v~~~~~g~~~~~~~rlp~~~ar~Weveisg~~~V~~v~LA~ 560 (567) T protein:vir:99 481 IRWHSKIFSLPERTSFSCIRVKSPAPERVGITIMADDVPVIHFAPGTFKGSVVRLPAATGQNWQVMVSGFGQVERITLST 560 (567) T ss_pred EEEecceEEecCccceeEEEEeccCCcceeEEEEEcCCceeecCCccccCceeecCCcccceEEEEEEecccEEEEEEec Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred chhhhcC Q lcl|Aclame:pro 561 SMSEMPV 567 (567) Q Consensus 561 s~~EL~~ 567 (567) ||+|||| T Consensus 561 S~~EL~~ 567 (567) T protein:vir:99 561 SMSEMPV 567 (567) T ss_pred chhhcCC Confidence 9999999 No 5 >protein:vir:827 Length: 567 # NCBI annotation: hypothetical protein # Family: family:all:1544 # MgeID: mge:16 # MgeName: VT2-Sa # Cross-refs: genbank:acc:NP_050560;genbank:gi:9633457;genbank:GeneID:1262210 Probab=100.00 E-value=1.6e-262 Score=1455.81 Aligned_cols=567 Identities=100% Similarity=1.525 Sum_probs=562.2 Q ss_pred CccceeehhhhccceeeccccccceeeeEEEecccccccCccchhcCcccccceEEeeeecCCeEeEeeccccccccccc Q lcl|Aclame:pro 1 MMPIAILANSIINPLIFKPEAVKGISMPYIDITTMRGMMPRVVTSMLPEHSAVLAEDCHFRFGVITPERQISGVEKTFTI 80 (567) Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~M~~I~i~~f~G~~pr~~p~lL~~~~a~~A~N~~~~~G~l~P~~~~~~v~~~~~~ 80 (567) |||||||||||||||||||||||||+|++|+|++|+||+||++||||||++||+|+||||++|+|+|+|+|+++++.++. T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~M~~i~i~~f~Ge~Prl~p~lLP~~~a~~A~n~~~~~G~itP~~~~~~~~~~~~~ 80 (567) T protein:vir:82 1 MMPIAILANSIINPLIFKPEAVKGISMPYIDITTMRGMMPRVVTSMLPEHSAVLAEDCHFRFGVITPERQISGVEKTFTI 80 (567) T ss_pred CcchhhhhhhhccceeecccccccceeeEEeecccccccccchhhhccccccceEEeeeecCCeeeeeeccccccccccc Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred cceEEEEECCceEEeeCCeEEEeeCCCCCCCcceEEEcCCCeeeeeeccccccCCcccccccccccCCCCcccceeEecC Q lcl|Aclame:pro 81 KPKTIFHYRDDFWFAWPDVVDVIRSPIAQDPHGRIYYTDGRFPKVTDATIATKGDGNHPTSSYRLGIPAPTTAPVCTVQQ 160 (567) Q Consensus 81 ~~~Tif~~~~~~w~~w~~~V~~~~spia~D~~~Rvy~tgd~~p~~t~~~iat~g~g~~p~~~y~LgVpaP~~ap~~~v~~ 160 (567) .+||||||++++||+|+++|||+|||||||+|+|||||||++||+++++|+++|+|.+|++||+||||+|+++|+++++. T Consensus 81 ~~~Tif~y~~~~W~~w~~~V~~ir~PvAqD~~~rvY~tgdg~Pk~t~~~iat~G~~~~P~~~y~LgVpaps~aP~~a~~~ 160 (567) T protein:vir:82 81 KPKTIFHYRDDFWFAWPDVVDVIRSPIAQDPHGRIYYTDGRFPKVTDATIATKGDGNHPTSSYRLGIPAPTTAPVCTVQQ 160 (567) T ss_pred CceeeeeecCcEeEEeCCceeeccCccccCCcccEEEecCCcceeeeeeeeecCCCCCCcchhhcccCCccccceeeecC Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred CCCCCCCccccceeeEEEEEEEecCCCccCCcccceeEEEecCCCEEEEccccCCCCCCccceEEEEEEEcCCCCeeEEE Q lcl|Aclame:pro 161 GGDVSDDNPNDDETRFYTETFVSDYGEEGPPGPASLEVTLRTPGTAVQLTLAPVPLQNASIKRRRIYRSASGGGEADFLL 240 (567) Q Consensus 161 g~~~~g~~~~d~et~~Y~~TfVt~~GeES~pS~~S~~v~v~~~g~~V~L~~~p~~~~~~~it~~RIYRs~tggg~~e~~l 240 (567) ++..+++.+.|+++|+|+|||||++||||+||++|..+++..+|+.|+|+++|+++++++|+++|||||++|++++||+| T Consensus 161 ~~~~~~~~p~d~etr~Yv~TfVt~~GeES~PS~~S~~~~v~~pg~~V~ls~~p~~~~~~~i~~~RIYRS~tg~~gtdy~l 240 (567) T protein:vir:82 161 GGDVSDDNPNDDETRFYTETFVSDYGEEGPPGPASLEVTLRTPGTAVQLTLAPVPLQNASIKRRRIYRSASGGGEADFLL 240 (567) T ss_pred CCCCCCCCCccccceEEEEEEEcCCCCcCCCcccccceeeecCCceEEEeeccCCccccccceEEEEEecCCCCceeeEE Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred EEeccCceeeEEeccCccccCcccchhhccCCCCCCceeeeecCcEEEEEECCEEEEecCCCcccCchhhceecccceEE Q lcl|Aclame:pro 241 VAELDASVLSYTDKIPAKNLGPSLATWDYLPPPENMTGLCLMANGIAAGFAGNEVMFSEAYLPYAWPEVNRHTTAEDIVA 320 (567) Q Consensus 241 Vael~~st~sy~D~~~~~~Lg~~L~t~~~~~Pp~~~~~l~~~~NG~l~~a~Gn~l~FSEp~~Phawp~~y~~~~~~~Iv~ 320 (567) |||+++++++|+|++++++||++|+|++|++||++|+|||+|+||||++|.||+|||||||+|||||++|+++++++||| T Consensus 241 Vael~as~~sf~D~~~~~~lg~~Lps~~w~~PP~~m~GL~~m~NGimAgF~GneV~FsEpylPyAWP~~Yr~t~~~dIVa 320 (567) T protein:vir:82 241 VAELDASVLSYTDKIPAKNLGPSLATWDYLPPPENMTGLCLMANGIAAGFAGNEVMFSEAYLPYAWPEVNRHTTAEDIVA 320 (567) T ss_pred EEeeccceeeeeeccchhhcccccccccccCcCcccceeeecccceEEeecCCEEEEecCCCCcccchhhccCCCCCeEE Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred EEEeCCeEEEEEcCcEEEEEcCCcccceeEeecccCCcccccceeecCceEEEecCCcEEEEcCCceeEeecccccchhH Q lcl|Aclame:pro 321 ICPLGTSLVVATKGEPYLFSGVSPSTISGSKIPSMQACLSRRSMVAMEGFVLYAGTNGLVSVDANGNVALATEQIVSPEQ 400 (567) Q Consensus 321 i~pv~~gl~V~T~~~py~lsG~~p~~m~~~~l~~~~pcvs~~siv~~~~~v~y~s~dGlv~~~~~G~~~~vt~~~~~~~~ 400 (567) |++++++|||+|+|+||+++|++|++|+.+||+.+|||+|+||||+++++|+|+|+||||+++++|+++++|+++|+||| T Consensus 321 iA~~gt~LVV~TkG~PYl~sG~sP~sms~~kL~~~qpCvS~rsiV~~~g~v~Yas~dGLv~i~a~G~a~vvT~~l~t~~q 400 (567) T protein:vir:82 321 ICPLRTSLVVATKGEPYLFSGVSPSTISGSKIPSMQACLSRRSMVAMEGFVLYAGTNGLVSVDANGNVALATEQIVSPEQ 400 (567) T ss_pred EEecccEEEEEEcCceEEEEcCChhhccccccccccccccccceeeecceEEeecCCcEEEEecCCchhhhhhhccChHH Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred HhhhcCcccEEEEEEcCeEEEEEecCCCcceeEEEccCCceeEEEeeeeeEEEEEecCCeEEEEeCCEEEEEcCCCCcee Q lcl|Aclame:pro 401 WQSQFNPASIVAYPWRGEYIACYTKPDGKQDVFVFSPVNMDIRYLSTPFDCAWVDLAKDMMRVVTGDKMSVLAGGALPST 480 (567) Q Consensus 401 W~~~l~P~ti~a~~~~G~Y~~~y~~~~g~~~~~ifd~~~~~~~~~~~~~~a~~~~~~~d~ly~~~g~~i~~~~~g~~~~~ 480 (567) ||++|||+||+|++|||+||+||++.+|++++|||||.++++++++++|||+|+|..+|+||+++|++||+|++|+++++ T Consensus 401 W~a~~~P~ti~A~~~eG~Y~a~Y~~~~g~~~~fifdp~~~~~~~i~~~~~~~~~d~~~d~Ly~~~~~~l~~~~~g~~~~~ 480 (567) T protein:vir:82 401 WQSQFNPASIVAYPWRGEYIACYTKPDGKQDVFVFSPVNMDIRYLSTPFDCAWVDLAKDMMRVVTGDKMSVLAGGALPST 480 (567) T ss_pred HHhcCCcceEEEEeecCeEEEEEeCCCCCcceEEEcccccEEEEEecCceeEEEEeecCeEEEeeCCEEeeecCCCCcee Confidence 99889999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred EEEEeeeEEcCCCCceeEEEEeeCCcCceEEEEEECCeeeEeecCcccCCcceEcCCcccceEEEEEEecceEEEEEeec Q lcl|Aclame:pro 481 IRWHSKIFSLPERTSFSCIRVKSPAPERVGITIMADDVPVIHFAPGTFKGSVVRLPAATGQNWQVMVSGFGQVERITLST 560 (567) Q Consensus 481 ~~WrSK~f~~~~~~~f~~~~V~~~~~~~~~~~i~~d~~~~~~~~~~~~~~~~~RLP~~~~~~wqiei~g~~~V~~i~la~ 560 (567) ++||||+|.+|+++||+|+||++.+.++++|++++||..++++++++.+++++|||++++|+|||||+|+++|++|+||+ T Consensus 481 ~~WrSK~f~~p~~~sf~~~rV~s~~~~~v~i~~~~dg~~v~~~~~g~~~~~~~rlp~~~ar~Weveisg~~~V~~v~LA~ 560 (567) T protein:vir:82 481 IRWHSKIFSLPERTSFSCIRVKSPAPERVGITIMADDVPVIHFAPGTFKGSVVRLPAATGQNWQVMVSGFGQVERITLST 560 (567) T ss_pred EEEecceEEecCccceeEEEEeccCCCceeEEEEEcCCceeecCCcccCCceeeccCcccceEEEEEEecccEEEEEEec Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred chhhhcC Q lcl|Aclame:pro 561 SMSEMPV 567 (567) Q Consensus 561 s~~EL~~ 567 (567) ||+|||| T Consensus 561 S~~EL~~ 567 (567) T protein:vir:82 561 SMSEMPV 567 (567) T ss_pred chhhcCC Confidence 9999999 No 6 >protein:vir:104388 Length: 566 # NCBI annotation: hypothetical protein # Family: family:all:1544 # MgeID: mge:1471 # MgeName: 86 # Cross-refs: genbank:acc:YP_794072;genbank:gi:116222017;genbank:GeneID:4397450 Probab=100.00 E-value=4.5e-260 Score=1442.43 Aligned_cols=566 Identities=89% Similarity=1.416 Sum_probs=559.5 Q ss_pred ccceeehhhhccceeeccccccceeeeEEEecccccccCccchhcCcccccceEEeeeecCCeEeEeecccccccccccc Q lcl|Aclame:pro 2 MPIAILANSIINPLIFKPEAVKGISMPYIDITTMRGMMPRVVTSMLPEHSAVLAEDCHFRFGVITPERQISGVEKTFTIK 81 (567) Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~M~~I~i~~f~G~~pr~~p~lL~~~~a~~A~N~~~~~G~l~P~~~~~~v~~~~~~~ 81 (567) ||||||||||||||||||||||||+|++|+|++|+||+||++||||||++||+|+||||++|+|+|+|+|++++++++.. T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~M~~i~i~~f~Ge~Pr~~p~lLP~~~a~~A~n~~~~~G~itP~~~~~~~~~~~~~~ 80 (566) T protein:vir:10 1 MPIAILANSIINPLIFKPEAVKGISMPYIDITTMRGMMPRVVTSMLPDHSAVLAEDCHFRFGVITPERQISGVEKTFTIK 80 (566) T ss_pred CceeeehhhhccceeecccccccceeeEEeecccccccccchhhhccccccceEEeeeecCCeeeeeecccccccccccC Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred ceEEEEECCceEEeeCCeEEEeeCCCCCCCcceEEEcCCCeeeeeeccccccCCcccccccccccCCCCcccceeEecCC Q lcl|Aclame:pro 82 PKTIFHYRDDFWFAWPDVVDVIRSPIAQDPHGRIYYTDGRFPKVTDATIATKGDGNHPTSSYRLGIPAPTTAPVCTVQQG 161 (567) Q Consensus 82 ~~Tif~~~~~~w~~w~~~V~~~~spia~D~~~Rvy~tgd~~p~~t~~~iat~g~g~~p~~~y~LgVpaP~~ap~~~v~~g 161 (567) +||||||++++||+|+++|||+|||||||+|||||||||++||+|.++||++|+|.+|.++|+||||+|+++|++++..+ T Consensus 81 ~kTif~y~~~~W~~w~~~V~~ir~PvAqD~~~rvY~tg~~~Pk~t~~diAt~g~~~~pa~~y~LgVPaPs~apv~~~~~~ 160 (566) T protein:vir:10 81 PKTIFHYRDDFWFAWPDVVDVIRSPVAQDNYGRIYYTDGKFPKVTAAEIATKGEGNFPAASYRLGIPAPTTAPVCTVQKG 160 (566) T ss_pred ceeeeeecCcEeEEeCCceeeccCccccCCcceEEEeeCCcceeeecceeeccccccccccccccCCCCcccceeeccCC Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999988888 Q ss_pred CCCCCCccccceeeEEEEEEEecCCCccCCcccceeEEEecCCCEEEEccccCCCCCCccceEEEEEEEcCCCCeeEEEE Q lcl|Aclame:pro 162 GDVSDDNPNDDETRFYTETFVSDYGEEGPPGPASLEVTLRTPGTAVQLTLAPVPLQNASIKRRRIYRSASGGGEADFLLV 241 (567) Q Consensus 162 ~~~~g~~~~d~et~~Y~~TfVt~~GeES~pS~~S~~v~v~~~g~~V~L~~~p~~~~~~~it~~RIYRs~tggg~~e~~lV 241 (567) +...++...|++||+|+|||||++||||+||++|..+++..+|+.|+|+++++++++++|++||||||++|++++||+|| T Consensus 161 sg~~~~~~~d~~tr~Yv~TfVt~~GeES~PS~~S~~v~v~~~gs~V~ltl~~~p~~~~~i~~~RIYRS~tg~~gtdy~lV 240 (566) T protein:vir:10 161 EGATDENPNDDETRFYTETFVSAYGEEGPPGPESLEVTVGIPDTPVQLTLSPVPLQDANINRRRIYRSVSGGGEADFLLV 240 (566) T ss_pred CcccCCCCcccceeEEEEEEEcCCCCcCCCccccceeEecCCCceEEEEecCCCcCcCCceeEEEEEecCCCCceeEEEE Confidence 77778888999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred EeccCceeeEEeccCccccCcccchhhccCCCCCCceeeeecCcEEEEEECCEEEEecCCCcccCchhhceecccceEEE Q lcl|Aclame:pro 242 AELDASVLSYTDKIPAKNLGPSLATWDYLPPPENMTGLCLMANGIAAGFAGNEVMFSEAYLPYAWPEVNRHTTAEDIVAI 321 (567) Q Consensus 242 ael~~st~sy~D~~~~~~Lg~~L~t~~~~~Pp~~~~~l~~~~NG~l~~a~Gn~l~FSEp~~Phawp~~y~~~~~~~Iv~i 321 (567) ||+++++++|+|++++++||++|+|++|++||++|+|||+|+||||++|.||+|||||||+|||||++|+++++++|||| T Consensus 241 ael~as~~sf~Dd~~~~~lg~~Lps~~w~~PP~~m~GL~~m~NGimAgF~GneV~FsEpylPyAWP~~Yr~t~~~dIVai 320 (566) T protein:vir:10 241 AELEASVLSYTDNIPAKNLGPSLATWDYLPPPENMTGLCLMANGIAAGFAGNEVMFSEAYLPYAWPEVNRHTTAEDIVAV 320 (566) T ss_pred eeecccceeeeccccccccCcccccccccCcCcccceeeecccceEEeecCCEEEEecCCCCcccchhhccCCCCCeEEE Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred EEeCCeEEEEEcCcEEEEEcCCcccceeEeecccCCcccccceeecCceEEEecCCcEEEEcCCceeEeecccccchhHH Q lcl|Aclame:pro 322 CPLGTSLVVATKGEPYLFSGVSPSTISGSKIPSMQACLSRRSMVAMEGFVLYAGTNGLVSVDANGNVALATEQIVSPEQW 401 (567) Q Consensus 322 ~pv~~gl~V~T~~~py~lsG~~p~~m~~~~l~~~~pcvs~~siv~~~~~v~y~s~dGlv~~~~~G~~~~vt~~~~~~~~W 401 (567) ++++++|||+|+|+||+++|++|++|+.+||+.+|||+|+||||+++++|+|+|+||||+++++|+++++|+++|+|||| T Consensus 321 A~~gt~LVV~TkG~PYl~sG~sP~sms~~kL~~~qaCvS~rsiV~~~g~v~Yas~dGLv~v~a~g~a~vvT~~l~t~~qW 400 (566) T protein:vir:10 321 CPLGTSLVVATKGEPYLFSGVSPSTISGSKIPSMQACLSRQSMVAMEGFVLYAGTNGLVSVDANGNAALATEQIISPEQW 400 (566) T ss_pred EeccceEEEEEcCceEEEEcCChhhccccccccccccccccceeeecceEEeecCCceEEEecCCChhhhhhhhcChhHH Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred hhhcCcccEEEEEEcCeEEEEEecCCCcceeEEEccCCceeEEEeeeeeEEEEEecCCeEEEEeCCEEEEEcCCCCceeE Q lcl|Aclame:pro 402 QSQFNPASIVAYPWRGEYIACYTKPDGKQDVFVFSPVNMDIRYLSTPFDCAWVDLAKDMMRVVTGDKMSVLAGGALPSTI 481 (567) Q Consensus 402 ~~~l~P~ti~a~~~~G~Y~~~y~~~~g~~~~~ifd~~~~~~~~~~~~~~a~~~~~~~d~ly~~~g~~i~~~~~g~~~~~~ 481 (567) |++|||+||+|++|||+||+||++.+|++++|||||.++++++++.+|||.|+|+.+|+||+++|++||+|++|++++++ T Consensus 401 ~~~~~P~ti~A~~~eG~Y~a~Y~~~~g~~~~fi~dp~g~~i~~l~~~~d~~~~d~~~d~ly~~~g~~i~~~~~g~~~~~~ 480 (566) T protein:vir:10 401 QTQFNPASIVAYPWRGEYIACYTKPDGEKDVFVFNPAGMDIRHLSTPFDCACVDLVNDVMRVVSGQNMSAMAGGRLPSLI 480 (566) T ss_pred HhcCCcceEEEEeecCeEEEEEeCCCCCccEEEEcccCceEEEeccccceeEEeeccCeeeeeeCCeeeeecCCCCCceE Confidence 98899999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred EEEeeeEEcCCCCceeEEEEeeCCcCceEEEEEECCeeeEeecCcccCCcceEcCCcccceEEEEEEecceEEEEEeecc Q lcl|Aclame:pro 482 RWHSKIFSLPERTSFSCIRVKSPAPERVGITIMADDVPVIHFAPGTFKGSVVRLPAATGQNWQVMVSGFGQVERITLSTS 561 (567) Q Consensus 482 ~WrSK~f~~~~~~~f~~~~V~~~~~~~~~~~i~~d~~~~~~~~~~~~~~~~~RLP~~~~~~wqiei~g~~~V~~i~la~s 561 (567) +||||+|.+|+++||+|+||++++.++++|+|++||..+.++++++.+++++|||++++|+|||||+|+++|+||+||+| T Consensus 481 ~WrSK~f~~p~~~sf~~~rV~s~~~~~v~i~i~ad~~~v~~~a~G~~~~~~~rLp~~~~~~Wevevsg~~~V~~v~La~S 560 (566) T protein:vir:10 481 RWHSKVFSLPERTSFSCLRVKSPTPERVGITVLADDVPVIHLAPGSLSGSVVRLPAATGQNWQVLVSGFGQVERITLSTS 560 (566) T ss_pred EEecceEEecCCcceeEEEeecCCccceeEEEEECCEEEEEeCCCccccceeecCCCccceEEEEEEecccEEEEEEecc Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred hhhhcC Q lcl|Aclame:pro 562 MSEMPV 567 (567) Q Consensus 562 ~~EL~~ 567 (567) |+|||| T Consensus 561 ~~EL~~ 566 (566) T protein:vir:10 561 MSELPI 566 (566) T ss_pred hhhcCC Confidence 999999 No 7 >protein:vir:93631 Length: 580 # NCBI annotation: Bcep22gp67 # Family: family:all:1544 # MgeID: mge:1470 # MgeName: Bcep22 # Cross-refs: genbank:acc:NP_944296;genbank:gi:38640373;genbank:GeneID:2658280 Probab=100.00 E-value=4.5e-211 Score=1173.79 Aligned_cols=514 Identities=28% Similarity=0.511 Sum_probs=479.9 Q ss_pred eeEEEecccccccCccchhcCcccccceEEeeeecCCeEeEeecc---ccccccccccceEEEEECCceEEeeCCeEEEe Q lcl|Aclame:pro 27 MPYIDITTMRGMMPRVVTSMLPEHSAVLAEDCHFRFGVITPERQI---SGVEKTFTIKPKTIFHYRDDFWFAWPDVVDVI 103 (567) Q Consensus 27 M~~I~i~~f~G~~pr~~p~lL~~~~a~~A~N~~~~~G~l~P~~~~---~~v~~~~~~~~~Tif~~~~~~w~~w~~~V~~~ 103 (567) |++|+|++|+||+||++||||||++||+|+||||++|+|+|+|+| .+++......++||||+ +++||+|+++|||+ T Consensus 1 M~~i~i~~f~Ge~Prl~p~lLP~~~a~~a~n~~~~~G~i~P~~~~~~~~~~~~i~~~~~~t~~~~-~~~W~~w~~~V~~i 79 (580) T protein:vir:93 1 MTIIKITGFSGEIPRLVPRLLPDTAAQNATNARLESGGLTPYRKPKFITRISTIPAGQIETIYRN-GETWMAWDKPVYAA 79 (580) T ss_pred CeeEeecccccccccchhhhccccccceEEeeeccCCeeeeeeCchhhccccccCcCcceEEEec-CceeEEeCCceeee Confidence 999999999999999999999999999999999999999999999 56666667788999987 77999999999999 Q ss_pred eCCCCCCCcceEEEcCCCeeeeeeccccccCCcccccccccccCCCCcccceeEecCCCCCCCCccccceeeEEEEEEEe Q lcl|Aclame:pro 104 RSPIAQDPHGRIYYTDGRFPKVTDATIATKGDGNHPTSSYRLGIPAPTTAPVCTVQQGGDVSDDNPNDDETRFYTETFVS 183 (567) Q Consensus 104 ~spia~D~~~Rvy~tgd~~p~~t~~~iat~g~g~~p~~~y~LgVpaP~~ap~~~v~~g~~~~g~~~~d~et~~Y~~TfVt 183 (567) |||||+| |||||||++||++. +..+|+||||+|+.+|++...+++. +++++|.|+||||| T Consensus 80 ~~PvA~D---Rvy~Td~g~Pkvt~-----------~g~sy~lgVpaPs~Apt~~~~g~g~------l~~~~y~Yv~TfVt 139 (580) T protein:vir:93 80 PGPVAAD---RLYVMGDGAPKMIV-----------GGTTYPLAVPMPSAALTAATSGTGT------GDVFSRVYVYTFVT 139 (580) T ss_pred cCccccc---eeEEcCCcccceec-----------CCccccccCCCcccCceeeecCCCC------cCccceEEEEEEEc Confidence 9999999 99999999999865 1246999999999999887755443 46689999999999 Q ss_pred cCCCccCCcccceeEEEecCCCEEEEccccCCCCCCccceEEEEEEEcCCCCeeEEEEEeccCceeeEEeccCccccCcc Q lcl|Aclame:pro 184 DYGEEGPPGPASLEVTLRTPGTAVQLTLAPVPLQNASIKRRRIYRSASGGGEADFLLVAELDASVLSYTDKIPAKNLGPS 263 (567) Q Consensus 184 ~~GeES~pS~~S~~v~v~~~g~~V~L~~~p~~~~~~~it~~RIYRs~tggg~~e~~lVael~~st~sy~D~~~~~~Lg~~ 263 (567) ++||||+||++|..|++. +|++|+|+++|+++++++|+++|||||.+|+++++|+||||+++++++|+|+.++++|+++ T Consensus 140 ~~GeES~PS~~S~~vtv~-~g~tVtLs~~p~p~~~~~i~~~RIYRS~tG~~gtdy~lVAel~Ag~~sF~Dd~s~a~Lge~ 218 (580) T protein:vir:93 140 GFGEESEPSAISNEVNWQ-AGQTVTLSGFQAAPAGRNITKQRIYRSQTSLSGTDLYFIAERDASAANFVDNVPLSDQNEP 218 (580) T ss_pred CCCCcCCCcccccceeeC-CCCeEEEEecCCCCCCCccceEEEEEeccCCCceeEEEEeeeccceeeeeecccccccccc Confidence 999999999999999986 6889999999999999999999999999999889999999999999999999999999999 Q ss_pred cchhhccCCCCCCceeeeecCcEEEEEECCEEEEecCCCcccCchhhceecccceEEEEEeCCeEEEEEcCcEEEEEcCC Q lcl|Aclame:pro 264 LATWDYLPPPENMTGLCLMANGIAAGFAGNEVMFSEAYLPYAWPEVNRHTTAEDIVAICPLGTSLVVATKGEPYLFSGVS 343 (567) Q Consensus 264 L~t~~~~~Pp~~~~~l~~~~NG~l~~a~Gn~l~FSEp~~Phawp~~y~~~~~~~Iv~i~pv~~gl~V~T~~~py~lsG~~ 343 (567) |+|++|++||++|+|||+||||||++|.||+|||||||+|||||++|+++++++||+|++++++|||+|+++|||++|++ T Consensus 219 Lps~~~~~PP~~m~gL~~m~nGi~agF~Gnev~fsEpy~P~AWP~~yr~t~~~~Ivaia~~g~~LvV~T~g~pyl~~G~~ 298 (580) T protein:vir:93 219 LPSLEWNAPPDDLTGLISLPNGMMAAFRGKELWLCEPWRPHAWPQKYVLTMDYNIVALGAYGTTIVVATDGQPYIVSGAS 298 (580) T ss_pred cchhhccCcCCCcceEEeeccceEEEEeCCEEEEecCCCCccchhhcCCCCCCCceeEeeeCceEEEEEcCceEEEEccC Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred cccceeEeecccCCcccccceeecCceEEEecCCcEEEEcCCceeEeecccccchhHHhhhcCcccEEEEEEcCeEEEEE Q lcl|Aclame:pro 344 PSTISGSKIPSMQACLSRRSMVAMEGFVLYAGTNGLVSVDANGNVALATEQIVSPEQWQSQFNPASIVAYPWRGEYIACY 423 (567) Q Consensus 344 p~~m~~~~l~~~~pcvs~~siv~~~~~v~y~s~dGlv~~~~~G~~~~vt~~~~~~~~W~~~l~P~ti~a~~~~G~Y~~~y 423 (567) |++|+++||+.+|||+|+||||+++++|+|+|+||||+++++| ++++|+++|+|||||+ |||+||+|++|||+||+|| T Consensus 299 P~~ms~~kL~~~q~CvS~rsiV~~~~~v~Yas~dGLv~i~~~g-a~vvT~~l~t~~qW~~-~~P~ti~a~~~eG~Y~a~Y 376 (580) T protein:vir:93 299 PDAMSQEKLELNLPCINARGLVDLGYAIAYPSHDGLVVASSSG-ARVVTDQLMTRNDWLK-TAPGRFVSGQFFGRYLASY 376 (580) T ss_pred hhhccccccccccccccccceeecCceEEeecCCcEEEEeCCh-HHHHHhhccChhHHHh-cCCceEEEEeecCeEEEEE Confidence 9999999999999999999999999999999999999999998 8999999999999995 9999999999999999999 Q ss_pred ecCC----CcceeEEEccCCce--eEEEeeeeeEEEEEecCCeEEEEeCCEEEEEcCCCC-ceeEEEEeeeEEcCCCCce Q lcl|Aclame:pro 424 TKPD----GKQDVFVFSPVNMD--IRYLSTPFDCAWVDLAKDMMRVVTGDKMSVLAGGAL-PSTIRWHSKIFSLPERTSF 496 (567) Q Consensus 424 ~~~~----g~~~~~ifd~~~~~--~~~~~~~~~a~~~~~~~d~ly~~~g~~i~~~~~g~~-~~~~~WrSK~f~~~~~~~f 496 (567) ++.+ ++++.||||++.++ +.+++..+||+|+|+.+|+||+++|++||+|+++++ +++++||||+|.+|+++|| T Consensus 377 ~~~~~~~~~~~g~fi~d~~~~~~~~~~~~~~~d~~~~d~~~d~Ly~~~~~~i~~~~~~~~~~~~~~WrSK~f~~~~~~sf 456 (580) T protein:vir:93 377 EYIDPAGTARRGSFIIDLTGQEAFLHRTNYKADATFYDITEGKLYLCIGQDIYEWDALDSENEILVWRSKQYVVQKPTNF 456 (580) T ss_pred cccccccccccceEEEecCCCcceeEEeccccceeeeeccCCeEEEEeCCEEEEEcCCCCCcceEEEecceEEecCCcCc Confidence 9766 67889999997766 566777889999999999999999999999999875 5689999999999999999 Q ss_pred eEEEEeeCCc------------------------------------------------------CceEEEEEECCeeeEe Q lcl|Aclame:pro 497 SCIRVKSPAP------------------------------------------------------ERVGITIMADDVPVIH 522 (567) Q Consensus 497 ~~~~V~~~~~------------------------------------------------------~~~~~~i~~d~~~~~~ 522 (567) +|+||++++. ..+.++||+||+.+.. T Consensus 457 ~~~rV~s~~~~~~~~~~a~~~~~~~~~a~n~~~~~~~~~~~~~~~~~v~~~~i~gd~~~~~~~~~~~~~~~~adG~~~~t 536 (580) T protein:vir:93 457 GVILIEGSVLMTPEEEAAEQAAIDAAKAHNDSIFGDASIGGELNGAALNVYPIDGDALVRIESSRFVAATVYADGKAVAT 536 (580) T ss_pred eEEEEeeccccchhhhhhhhhhhhhhhhhhhhcccccccccccccccceeeeeccccccccccccceEEEEeeCCeEEEE Confidence 9999986642 2566889999998744 Q ss_pred ecCcccCCcceEcCCc-ccceEEEEEEecceEEEEEeecchhhhcC Q lcl|Aclame:pro 523 FAPGTFKGSVVRLPAA-TGQNWQVMVSGFGQVERITLSTSMSEMPV 567 (567) Q Consensus 523 ~~~~~~~~~~~RLP~~-~~~~wqiei~g~~~V~~i~la~s~~EL~~ 567 (567) .. ..++++|||++ ++++|||||+|+++|++|+||+||+||.= T Consensus 537 ~~---~~~~~~RLPag~~a~~Wev~vsg~~~V~~v~la~s~~EL~~ 579 (580) T protein:vir:93 537 VS---KLNRMCRLPSGFLAQTWEVEVSANADIAQVTLAGTGAELAG 579 (580) T ss_pred Ee---cCCceEEccCCccccEEEEEEEeccceeEEEEecChHHHhc Confidence 43 35699999986 89999999999999999999999999997 No 8 >protein:vir:5120 Length: 615 # NCBI annotation: unknown # Family: family:all:1544 # MgeID: mge:114 # MgeName: PBC5 # Cross-refs: genbank:acc:NP_542277;genbank:gi:18071220;genbank:GeneID:929342 Probab=100.00 E-value=2.7e-208 Score=1158.52 Aligned_cols=536 Identities=30% Similarity=0.534 Sum_probs=478.6 Q ss_pred Ccccee----e---hhhhccceeeccccccceeeeEEEecccccccCccchhcCcccccceEEeeeecCCeEeEeecccc Q lcl|Aclame:pro 1 MMPIAI----L---ANSIINPLIFKPEAVKGISMPYIDITTMRGMMPRVVTSMLPEHSAVLAEDCHFRFGVITPERQISG 73 (567) Q Consensus 1 ~~~~~~----~---~~~~~~~~~~~~~~~~~~~M~~I~i~~f~G~~pr~~p~lL~~~~a~~A~N~~~~~G~l~P~~~~~~ 73 (567) |.--.. | |-|-+. ...|- .=|+|+.|+|++|+||+||++|||||+++||+|+||||++|+|+|+|++++ T Consensus 1 ~~~~~~~~~~~~~~~~~~~~-~~~~~---~~~~M~~I~i~~f~Ge~Prl~P~lLP~~~A~~A~N~~~~~G~ltP~~~~~~ 76 (615) T protein:vir:51 1 MVSTGTRRGTLRSRAPSRLH-CYLKQ---GYLGMVAIKISAFAGEQPMLLPRLLPETGATAAMNVRLNDGGLTPINKPIE 76 (615) T ss_pred CcccccccceecccCcceee-eeeec---CceeeEEEeecccccccccchhhhccCcccceEEeeeecCCeeeeecCccc Confidence 221111 0 111111 01121 237999999999999999999999999999999999999999999999999 Q ss_pred ccccccccceEEEEECCceEEeeCCeEEEeeCCCCCCCcceEEEcCCCeeeeeeccccccCCcccccccccccCCCCccc Q lcl|Aclame:pro 74 VEKTFTIKPKTIFHYRDDFWFAWPDVVDVIRSPIAQDPHGRIYYTDGRFPKVTDATIATKGDGNHPTSSYRLGIPAPTTA 153 (567) Q Consensus 74 v~~~~~~~~~Tif~~~~~~w~~w~~~V~~~~spia~D~~~Rvy~tgd~~p~~t~~~iat~g~g~~p~~~y~LgVpaP~~a 153 (567) ++..++..++|||||.++ ||+|+++|||+||||||| |||||||++||++. |..+|+||||+|+++ T Consensus 77 ~~~~~~~~~~Tif~~~~~-W~~w~~~V~av~sPvA~D---Rvy~tgdg~Pkv~~-----------~~~sY~LgVpaPs~a 141 (615) T protein:vir:51 77 VATIATASQKTIYRHQGS-WLSWPNVVNAVPGPVAQD---RLYFTGDGAPKVKI-----------GGVDYALKVPRPTGA 141 (615) T ss_pred ccccccccceeeeeecCc-eeccCCceeEccCCcccc---eeEEcCCCcceEee-----------cccCccccccCCCcc Confidence 999888899999999655 999999999999999999 99999999999873 445899999999999 Q ss_pred ceeEecCCCCCCCCccccceeeEEEEEEEecCCCccCCcccceeEEEecCCCEEEEccccCCCCCCccceEEEEEEEcCC Q lcl|Aclame:pro 154 PVCTVQQGGDVSDDNPNDDETRFYTETFVSDYGEEGPPGPASLEVTLRTPGTAVQLTLAPVPLQNASIKRRRIYRSASGG 233 (567) Q Consensus 154 p~~~v~~g~~~~g~~~~d~et~~Y~~TfVt~~GeES~pS~~S~~v~v~~~g~~V~L~~~p~~~~~~~it~~RIYRs~tgg 233 (567) |++.+.+++. +|+++|+|+|||||++||||+|||+|..+++. +|+.|+|+++|+++++++|+++|||||++|+ T Consensus 142 p~~~~~g~g~------~d~etr~Yv~TfVt~~GeES~PSp~S~~v~v~-~g~tVtLs~~pa~~~~~~i~~rRIYRS~tg~ 214 (615) T protein:vir:51 142 LTAALSGTGS------GDIQSRTYVYTWVTSFGEESAPCPASIIVDWK-PGQTVTLSGFAATPGGRSITTQRIYRSQTGK 214 (615) T ss_pred ceEEecCCCC------ccccceEEEEEEEcCCCCcCCCCccceeeEec-CCCeEEEeeccCCcCCCceeeEEEEEeccCC Confidence 9987766544 46789999999999999999999999999986 6889999999999999999999999999999 Q ss_pred CCeeEEEEEeccCceeeEEeccCccccCcccchhhccCCCCCCceeeeecCcEEEEEECCEEEEecCCCcccCchhhcee Q lcl|Aclame:pro 234 GEADFLLVAELDASVLSYTDKIPAKNLGPSLATWDYLPPPENMTGLCLMANGIAAGFAGNEVMFSEAYLPYAWPEVNRHT 313 (567) Q Consensus 234 g~~e~~lVael~~st~sy~D~~~~~~Lg~~L~t~~~~~Pp~~~~~l~~~~NG~l~~a~Gn~l~FSEp~~Phawp~~y~~~ 313 (567) +++||+|||||++++++|+|++++++||++|+|++|++||++|+|||+|+||||++|.||+|||||||+|||||++|+++ T Consensus 215 ~gtdy~lVAel~as~~sf~D~~~~~~Lg~~Lps~~w~~PP~~l~GL~~m~NGimAgF~GneV~FsEpy~PyAWP~~Yr~t 294 (615) T protein:vir:51 215 TGTGLYLIAERAASAGNFTDNIAVDQFQEPLPSADWNEPPDGLAGLAEMPNGMMAAFVGRSIYFCEPYRPHAWPEKYSRN 294 (615) T ss_pred CceeeEEEeeecccceeeeeccchhhcCcccccccccCcCcchhhhhccccceEEeecCCEEEEecCCCCcccchhcccC Confidence 88999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred cccceEEEEEeCCeEEEEEcCcEEEEEcCCcccceeEeecccCCcccccceeecCceEEEecCCcEEEEcCCceeEeecc Q lcl|Aclame:pro 314 TAEDIVAICPLGTSLVVATKGEPYLFSGVSPSTISGSKIPSMQACLSRRSMVAMEGFVLYAGTNGLVSVDANGNVALATE 393 (567) Q Consensus 314 ~~~~Iv~i~pv~~gl~V~T~~~py~lsG~~p~~m~~~~l~~~~pcvs~~siv~~~~~v~y~s~dGlv~~~~~G~~~~vt~ 393 (567) ++++||||++++++|||+|+|+||+++|++|++|+++||+.+|||+|+||||+++++|+|+|+||||+++++|.++++|+ T Consensus 295 ~d~dIVaiA~~gt~LVV~TkG~PYl~sG~sP~sms~~kL~~~qpCvS~rsiV~~~~~v~Yas~dGLV~v~~~G~a~vvT~ 374 (615) T protein:vir:51 295 VGSDIVGIAALGSILVVVTKGKPYLLAGTHPDSMQQQQLEENLPCINARSIVDLGHAVCYASNDGLVAVRGDGSIRLVTE 374 (615) T ss_pred cCCCeeEEEecccEEEEEEcCceEEEEcCChhhccccccccccccccccceeEecceEEeecCCceEEEecCCchhhhhh Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred cccchhHHhhhcCcccEEEEEEcCeEEEEEecCCCcce---eEE---EccCCceeEEEeeeeeEEEEEecCCeEEEEe-C Q lcl|Aclame:pro 394 QIVSPEQWQSQFNPASIVAYPWRGEYIACYTKPDGKQD---VFV---FSPVNMDIRYLSTPFDCAWVDLAKDMMRVVT-G 466 (567) Q Consensus 394 ~~~~~~~W~~~l~P~ti~a~~~~G~Y~~~y~~~~g~~~---~~i---fd~~~~~~~~~~~~~~a~~~~~~~d~ly~~~-g 466 (567) ++|+|||||+ |||+||+|++|||+||+||++.++.+. +++ ||++...+++ +..+++.|+|..+|+||++. | T Consensus 375 ~l~t~~qW~~-l~P~ti~a~~~eG~Y~~~Y~~~~~~g~~~~g~~~~~~~~~~f~ir~-~~~~~~~~~d~~~~~Ly~l~~g 452 (615) T protein:vir:51 375 QLLSREKWLD-LSPFTIIGGQINGAYLLFYDNLSASGERIAGSISIYVDGQPFLVRS-SEIASSSFFDIGDTALYFMAPG 452 (615) T ss_pred hccChhHHHh-cCCceEEEEeecCeEEEEeccCCCCcceeeeeeEEecCCceeEEEe-ecccceeeeEecCceEEEEEcC Confidence 9999999995 999999999999999999998777642 344 4444344443 55689999999999999765 4 Q ss_pred -CEEEEEcC-CCCceeEEEEeeeEEcCCCCceeEEEEeeCCcC------------------------------------- Q lcl|Aclame:pro 467 -DKMSVLAG-GALPSTIRWHSKIFSLPERTSFSCIRVKSPAPE------------------------------------- 507 (567) Q Consensus 467 -~~i~~~~~-g~~~~~~~WrSK~f~~~~~~~f~~~~V~~~~~~------------------------------------- 507 (567) +.|++|++ +.++++++||||+|.+++++||+|++|+++++. T Consensus 453 ~~~i~~~~a~~g~~~~~~WrSK~F~~~~p~sf~~~~V~~~~~~~~~e~~~~~~~~~~~~aa~~ti~a~g~~~~~l~~~~l 532 (615) T protein:vir:51 453 SKTIQRFDAPQGAPQTLYWRSKEFITTSPSSMGAVLVDSGSAISLKALEALQEERNQIIAANAALFAAGDLQGGINARPL 532 (615) T ss_pred CceEEEEecCCCCcceEEecCceEEccCCCcceEEEEcCCcccchhhhhhhhhhhhhccccceeEEeccccccccccccc Confidence 46999997 557899999999999999999999999877553 Q ss_pred -----------------------ceEEEEEECCeeeEeecCcccCCcceEcCCc-ccceEEEEEEecceEEEEEeecchh Q lcl|Aclame:pro 508 -----------------------RVGITIMADDVPVIHFAPGTFKGSVVRLPAA-TGQNWQVMVSGFGQVERITLSTSMS 563 (567) Q Consensus 508 -----------------------~~~~~i~~d~~~~~~~~~~~~~~~~~RLP~~-~~~~wqiei~g~~~V~~i~la~s~~ 563 (567) .|.++||+||..+. ..++.++++|||++ ++|+|||||+|+++|++|+||+||+ T Consensus 533 ~~~~i~gd~~~~ip~~~t~~~~~~v~~~l~a~G~~~~---t~~k~~~~~RLP~g~~ar~Wevevsg~~~V~~v~LA~S~~ 609 (615) T protein:vir:51 533 NDRSINGDDLQPVPPPPTAADAASLTVSIFADGKLIQ---TIDKVDRIARVRAGLKARKWEVAISTNMQIAQVIMAASVE 609 (615) T ss_pred cccccCcccccccccccccccccceeEEEecCCceee---eeccCCceeEcccCcccceEEEEEEecccEEEEEEecChH Confidence 34456677776652 23366799999997 7999999999999999999999999 Q ss_pred hhcC Q lcl|Aclame:pro 564 EMPV 567 (567) Q Consensus 564 EL~~ 567 (567) ||.- T Consensus 610 EL~~ 613 (615) T protein:vir:51 610 ELKQ 613 (615) T ss_pred HHHh Confidence 9987 No 9 >protein:vir:105563 Length: 396 # NCBI annotation: hypothetical protein # Family: family:all:27455 # MgeID: mge:1540 # MgeName: F116 # Cross-refs: genbank:acc:YP_164316;genbank:gi:56692963;genbank:GeneID:3197174 Probab=100.00 E-value=1e-96 Score=546.80 Aligned_cols=351 Identities=16% Similarity=0.138 Sum_probs=297.7 Q ss_pred eeEEEecccccccCccchhcCc--------------------ccccc-eEEeeeecCCeEeEeeccccccccccccceEE Q lcl|Aclame:pro 27 MPYIDITTMRGMMPRVVTSMLP--------------------EHSAV-LAEDCHFRFGVITPERQISGVEKTFTIKPKTI 85 (567) Q Consensus 27 M~~I~i~~f~G~~pr~~p~lL~--------------------~~~a~-~A~N~~~~~G~l~P~~~~~~v~~~~~~~~~Ti 85 (567) |+...|.-|.|+++-...+-|+ +.++| .+-|++|++|.|+|+.+.-.-+.++....+|| T Consensus 1 ~~~~~~~~~~ginnv~~e~~l~~~~~~~~~~~r~a~nvdi~~~G~~~~r~~~tr~~~g~l~~~~~~~~~~~~~~~~~~tl 80 (396) T protein:vir:10 1 MATTSLVPLAGINNVAEDAALQRGGESPRLYVRDAVNIDLSPAGKAQLRASVRQVTDQPFRQLWQSPLHGDAFGALGDQW 80 (396) T ss_pred CcceeeeeeecccccccccccccCCCcccceeeeeeeecccCCCchhhhccCcccCCceecccccCccccceeeeCCceE Confidence 9999999999998887777666 34555 67778889999999998655567788899999 Q ss_pred EEECCceEEeeCCeEEEeeCCCCCCCcc-eEEEcCCCeeeeeeccccccCCcccccccccccCCCCcccceeEecCCCCC Q lcl|Aclame:pro 86 FHYRDDFWFAWPDVVDVIRSPIAQDPHG-RIYYTDGRFPKVTDATIATKGDGNHPTSSYRLGIPAPTTAPVCTVQQGGDV 164 (567) Q Consensus 86 f~~~~~~w~~w~~~V~~~~spia~D~~~-Rvy~tgd~~p~~t~~~iat~g~g~~p~~~y~LgVpaP~~ap~~~v~~g~~~ 164 (567) |+|.++.|+.|. .|+++++||++|+++ ||||||++.||+++. ..+|+|+||+|+.+++++.. |. T Consensus 81 ~~~~~~~w~~~~-~v~v~~~pva~d~~~~Rvy~t~~~~p~~~~~-----------~~~y~L~vp~P~~a~~~a~~-Gs-- 145 (396) T protein:vir:10 81 GKVDPHSWTFEP-LAQIGEGDLSHEVLNNRVCVAGTAGIFTYDG-----------AQAERLTLDTPAPPLLVAGA-GS-- 145 (396) T ss_pred EEEeCCeEEEEe-eeeeccCchhccccCCeEEEEcCCCceeeeC-----------CcceecCcCCCccccccccc-Cc-- Confidence 999999999998 479999999999997 999999999999753 35899999999987776532 22 Q ss_pred CCCccccceeeEEEEEEEecCCCccCCcccceeEEEecCCCEEEEccccCCCCCCccceEEEEEEEcCCCCeeEEEEEec Q lcl|Aclame:pro 165 SDDNPNDDETRFYTETFVSDYGEEGPPGPASLEVTLRTPGTAVQLTLAPVPLQNASIKRRRIYRSASGGGEADFLLVAEL 244 (567) Q Consensus 165 ~g~~~~d~et~~Y~~TfVt~~GeES~pS~~S~~v~v~~~g~~V~L~~~p~~~~~~~it~~RIYRs~tggg~~e~~lVael 244 (567) .+..++.|++|||+.+||||+||++|..|+ ..+|..|+|+ + +.+.+|+++|||||.++| ++|+|++|+ T Consensus 146 -----l~~~~~~Y~~t~V~~~gEEs~p~~~S~~v~-~~gg~~vtl~--~--~~~~~i~~~RiYrS~~~G--~~~~l~aE~ 213 (396) T protein:vir:10 146 -----LSQGTYGAAVAWLRGPQESAPSLIAFAEVT-DAGALEVTFP--L--CLDASVTGARLYLTRANG--GELLLAGDY 213 (396) T ss_pred -----cCCceEEEEEEEEecCCCcCcccccccccC-CCCCcEEEEE--c--ccCCCcceEEEEEeCCCh--hhhhheehh Confidence 234578899999999999999999999987 4455555543 2 456789999999985544 589999999 Q ss_pred cCceeeEEeccCccccCcccchhhccCCCCCCceeeeecCc--------EEEEEECCEEEEecCCCcccCchh-hceecc Q lcl|Aclame:pro 245 DASVLSYTDKIPAKNLGPSLATWDYLPPPENMTGLCLMANG--------IAAGFAGNEVMFSEAYLPYAWPEV-NRHTTA 315 (567) Q Consensus 245 ~~st~sy~D~~~~~~Lg~~L~t~~~~~Pp~~~~~l~~~~NG--------~l~~a~Gn~l~FSEp~~Phawp~~-y~~~~~ 315 (567) ++++++|+ |++..|..||+.|++|+.|+|| |++.++||+|||||||+||+|+++ +|++++ T Consensus 214 ~a~~~s~v-----------lPs~~w~gpP~~~~gL~pmP~G~~~A~faGRi~~A~Gn~V~FSEp~~Ph~~~~~~~~~~~~ 282 (396) T protein:vir:10 214 PLGAATVI-----------LPTLPELGRPAQFRHLSPMPTGKHLAYWRGRLLIARANVLRFSEALAYHLHDERYGFVQMP 282 (396) T ss_pred ccceeeee-----------eecCCCCCCCccccccccCchhHhhhhhcceEEEEeCCEEEEecCCCCceecchhccCCCC Confidence 99999995 4555677777777777777766 333447899999999999999875 799999 Q ss_pred cceEEEEEeCCeEEEEEcCcEEEEEcCCcccceeEeecccCC-----------cccccceeecCceEEEecCCcEEEEcC Q lcl|Aclame:pro 316 EDIVAICPLGTSLVVATKGEPYLFSGVSPSTISGSKIPSMQA-----------CLSRRSMVAMEGFVLYAGTNGLVSVDA 384 (567) Q Consensus 316 ~~Iv~i~pv~~gl~V~T~~~py~lsG~~p~~m~~~~l~~~~p-----------cvs~~siv~~~~~v~y~s~dGlv~~~~ 384 (567) ++|++|+|+++||||+|+++|||++|++|++|+++|+...+| |++++|+++++..++|+|+||||++.+ T Consensus 283 ~~Iv~lapv~~gL~Vgt~~~~y~~~G~dP~sms~~~l~~~~pvp~S~v~~p~~~~s~rs~~~~~~~~lwas~dGl~~g~~ 362 (396) T protein:vir:10 283 QRITFVQPVDGGIWVGQVDHVAFLDGADPASLSVSRRASRAPVPGSAVLVPAEVVGTNASPDGSPVAVWLAENGYVMGTS 362 (396) T ss_pred CceEEEEEecCeEEEEEcCcEEEEEcCChhHcceeecccCCCcccchhcccchhhhcccccccCcEEEEccCCcEEEEcC Confidence 999999999999999999999999999999999999965544 469999999999999999999999999 Q ss_pred CceeEeecccccchhHHhhhcCcccEEEEEE---cCeEEEEEe Q lcl|Aclame:pro 385 NGNVALATEQIVSPEQWQSQFNPASIVAYPW---RGEYIACYT 424 (567) Q Consensus 385 ~G~~~~vt~~~~~~~~W~~~l~P~ti~a~~~---~G~Y~~~y~ 424 (567) +|+++++|+++ ++|.+..|+.+ +.||++||. T Consensus 363 ~G~v~~l~~~~---------i~p~~~~A~~~~~~drRy~~~~~ 396 (396) T protein:vir:10 363 SGAIAEVHAGV---------LAGITGRAGTSVVFDRRLLTAVS 396 (396) T ss_pred Cceeeeecccc---------cCCCcccceEEEeecCeEEEEeC Confidence 99999999873 77888888887 999999996 No 10 >protein:vir:8837 Length: 513 # NCBI annotation: constituent protein # Family: family:all:4957 # MgeID: mge:158 # MgeName: PaP3 # Cross-refs: genbank:acc:NP_775245;genbank:gi:27476043;genbank:GeneID:2700591 Probab=99.23 E-value=4.2e-10 Score=72.01 Aligned_cols=421 Identities=12% Similarity=0.152 Sum_probs=221.0 Q ss_pred eeeeEEEecccccccCccchhcCcccccceEEeeeecCCeEeEeeccccccccccccceEEEEECCceEEeeCCeEEEee Q lcl|Aclame:pro 25 ISMPYIDITTMRGMMPRVVTSMLPEHSAVLAEDCHFRFGVITPERQISGVEKTFTIKPKTIFHYRDDFWFAWPDVVDVIR 104 (567) Q Consensus 25 ~~M~~I~i~~f~G~~pr~~p~lL~~~~a~~A~N~~~~~G~l~P~~~~~~v~~~~~~~~~Tif~~~~~~w~~w~~~V~~~~ 104 (567) +.|.-+++..=.|-+--++|-.||.++-+.|.|+.+..|.++|..+...|...+...+.-+|-|.+. .+.+.++ T Consensus 1 ~~~~~~~~~~~~g~~~d~~p~~lp~~a~s~~~N~~~~~~~~~~~~g~~pv~a~~~~~~~g~~~~~~~-----g~~~~~~- 74 (513) T protein:vir:88 1 MALERQEVKNPTGIVTDIAPADLPLDKWSFGNNVRFKNGKAQKALGHSPIFDTAQAPILDMFPFIRN-----NIPYWLL- 74 (513) T ss_pred CCcCChhhcccccceeccChhhcCCCcceeeeeeeEecceeeecCccceeeecCCCCceeeeeeecC-----CCeEEEE- Confidence 6677777888889999999999999999999999999999999998888855566666666654221 0111111 Q ss_pred CCCCCCCcceEEEcCCCeeeeeeccccccCCcccccccccccCCCCcccceeEecCCCCCCCCccccceeeEEEEEEEec Q lcl|Aclame:pro 105 SPIAQDPHGRIYYTDGRFPKVTDATIATKGDGNHPTSSYRLGIPAPTTAPVCTVQQGGDVSDDNPNDDETRFYTETFVSD 184 (567) Q Consensus 105 spia~D~~~Rvy~tgd~~p~~t~~~iat~g~g~~p~~~y~LgVpaP~~ap~~~v~~g~~~~g~~~~d~et~~Y~~TfVt~ 184 (567) +.+ .++|.-++.. ++ ++. . .+. +++. + .+..|+. T Consensus 75 ---~~~--~~~~~~~~~t--~~--dvs-----------------~---~~~---~~~~----------~---~~w~~~~- 108 (513) T protein:vir:88 75 ---CSE--KRLYLADGTT--II--DVS-----------------P---GPY---SASV----------T---NRWSVGS- 108 (513) T ss_pred ---eec--eEEEEecCce--ee--ecc-----------------c---cce---eecc----------c---Cceeeee- Confidence 111 1222221100 00 000 0 000 0000 0 0111211 Q ss_pred CCCccCCcccceeEEEecCCCEEEEccccCCCCCCccceEEEEEEEcCCCCeeEEEEEeccCceeeEEeccCccccCccc Q lcl|Aclame:pro 185 YGEEGPPGPASLEVTLRTPGTAVQLTLAPVPLQNASIKRRRIYRSASGGGEADFLLVAELDASVLSYTDKIPAKNLGPSL 264 (567) Q Consensus 185 ~GeES~pS~~S~~v~v~~~g~~V~L~~~p~~~~~~~it~~RIYRs~tggg~~e~~lVael~~st~sy~D~~~~~~Lg~~L 264 (567) +| |. |-.++....++ | ++....+|.| | T Consensus 109 f~-----------------~~-i~a~ng~~~~q---------~----------------~~~~s~~f~d------l---- 135 (513) T protein:vir:88 109 FN-----------------GV-IFANDGVNPPH---------H----------------LPPTESVFRV------L---- 135 (513) T ss_pred ec-----------------CE-EEEEcCCCcce---------E----------------EcCCCceeee------c---- Confidence 11 11 11111010110 0 1111122321 1 Q ss_pred chhhccCCCCCCceeeeecCcEEEEEE--------CCEEEEecCCCc----ccCch------hhceecc---cceEEEEE Q lcl|Aclame:pro 265 ATWDYLPPPENMTGLCLMANGIAAGFA--------GNEVMFSEAYLP----YAWPE------VNRHTTA---EDIVAICP 323 (567) Q Consensus 265 ~t~~~~~Pp~~~~~l~~~~NG~l~~a~--------Gn~l~FSEp~~P----hawp~------~y~~~~~---~~Iv~i~p 323 (567) + +| ++.-..+ ++..++++|.... .|.|++|...-| -.|.. ..++.++ ..||..++ T Consensus 136 ~--g~-p~~~~a~-~i~v~~~flv~~~~t~~~~~~PnrV~wS~~~D~~~~P~~W~~t~~t~~a~~~~l~d~~g~~v~g~~ 211 (513) T protein:vir:88 136 P--NF-PANTTFR-RLKSFKNFLIGLNVTSNSIEMPQMVWWSTSADAGGVPASWDPTDPTKDAGQNTLADTNGAIVDGVK 211 (513) T ss_pred c--CC-CcccceE-EEEEEeeEEEEeecccCcCCCCceEEEecccCCcccccccccccccCcccccccCCCccceeeeee Confidence 1 01 1111333 4456788888763 378999988765 55632 1244443 67999999 Q ss_pred eCCeEEEEEcCcEEEEE-cCCcccceeEeecccCCcccccceeecCceEEEecCCcEEEEcCCceeEeecccccchhHHh Q lcl|Aclame:pro 324 LGTSLVVATKGEPYLFS-GVSPSTISGSKIPSMQACLSRRSMVAMEGFVLYAGTNGLVSVDANGNVALATEQIVSPEQWQ 402 (567) Q Consensus 324 v~~gl~V~T~~~py~ls-G~~p~~m~~~~l~~~~pcvs~~siv~~~~~v~y~s~dGlv~~~~~G~~~~vt~~~~~~~~W~ 402 (567) .++.++|.++...|.++ +-+|-.+++.++..+-.|+++.|++..++.++|++++|+.+.. +++.+-|..+.+.+.=+. T Consensus 212 ~g~~liif~e~~i~~m~y~g~~~if~~~~i~~~~G~~~p~SI~~~~~~~ffls~~Gf~~~~-G~~~~~Ig~ekVdk~f~~ 290 (513) T protein:vir:88 212 LRDSFIIYKEDSVYSMRYIGGLYIFQFQQLFNDVGILGPNCAIEFDGNHFVVGHGDVYVHN-GVQKQSVIDAQVRKFFFS 290 (513) T ss_pred cccceEEEecccEEEEEecCCCceEEEEeecccccccCCceeEEECCeEEEEeCCceEEec-Cceeeecccchhhhhhhc Confidence 99999999999999998 6567788999999999999999999999999999999999885 667888877777776665 Q ss_pred hhcCccc---EEEEEE--cCeEEEEEecCCCcc-----eeEEEccCCceeEEEeee------------------------ Q lcl|Aclame:pro 403 SQFNPAS---IVAYPW--RGEYIACYTKPDGKQ-----DVFVFSPVNMDIRYLSTP------------------------ 448 (567) Q Consensus 403 ~~l~P~t---i~a~~~--~G~Y~~~y~~~~g~~-----~~~ifd~~~~~~~~~~~~------------------------ 448 (567) .+++.. |.+..- .-+|+-+|...++.. ..++||-..+.....+++ T Consensus 291 -~~n~~~~~~~~~~~d~~~~~v~~~y~s~~~~~~~~~~~~lVYd~~~~~Ws~~~~p~~~~g~~g~~~~~~~~~~~~~~~~ 369 (513) T protein:vir:88 291 -DINPDNYQRTFVLADHVNTEMWVCYSSTRSEPGKHCDRAIIWNWKENTWSIRDLPNVLSGAYGIIDPKTSNLWDDDSNP 369 (513) T ss_pred -cCCcccceEEEEEEcCcccEEEEEecCCCCCCCcccceEEEEEccCCeEEEEeccchhhcccccccccccceecccccc Confidence 477666 333322 234666676544432 346666654333211111 Q ss_pred eeEE----EE---EecCCeEEEEe--CCEEEEEcCCC----CceeEEEEeeeEEcCCCCceeEEEEe-eC--CcCceEEE Q lcl|Aclame:pro 449 FDCA----WV---DLAKDMMRVVT--GDKMSVLAGGA----LPSTIRWHSKIFSLPERTSFSCIRVK-SP--APERVGIT 512 (567) Q Consensus 449 ~~a~----~~---~~~~d~ly~~~--g~~i~~~~~g~----~~~~~~WrSK~f~~~~~~~f~~~~V~-~~--~~~~~~~~ 512 (567) ||.. .. +.....||++. +..++.|+.++ .++..+=.|..+.+..+-.+.-++-. -. ....+.+. T Consensus 370 ~d~~~~~~~~~~~~~~~~sl~~~~~~~~~~~~fd~~~~f~G~~lea~~~t~~~~~~~~~~~~~i~~v~~~~t~~g~~t~~ 449 (513) T protein:vir:88 370 WDTDTSVWGEGSYNPAKSSMIFTSFQDAKLFLFGETSTFSGQSFTSTLERSDIYLGDDRMMKTVSAVIPHITGNGVCNIW 449 (513) T ss_pred cccchhhhhccccccccceeEeeeccCCceeeecccccccCCceEEEEEecCccccCchhheeeeeeeeeeecceEEEEE Confidence 1100 00 11123455542 34567775432 36777778888887766655443321 10 01122222 Q ss_pred E--------------------EECCeeeEeecCcccCCcceEcCCcccceEEEEEEecceEEEEEeecchh Q lcl|Aclame:pro 513 I--------------------MADDVPVIHFAPGTFKGSVVRLPAATGQNWQVMVSGFGQVERITLSTSMS 563 (567) Q Consensus 513 i--------------------~~d~~~~~~~~~~~~~~~~~RLP~~~~~~wqiei~g~~~V~~i~la~s~~ 563 (567) + ..++..-.+..... -.--+|+|. +..|.+ .|... +++-...+- T Consensus 450 vg~~~~~~~~~~~s~~~~~~~~~~~~~~~r~~gRy-~~~ri~i~~--~~~w~~--~G~~v--e~~~~~g~R 513 (513) T protein:vir:88 450 VGNAQVQGSGIRWKGPYPYRIGQDYKIDTKHVGRY-IALKFDFAS--AGDWYF--NGYTL--EMAPKAGMR 513 (513) T ss_pred EeeeccCccccccccceeeecccCceEEeccCCce-EEEEEEccC--CCceEE--eeEEE--EEecCCCCC Confidence 1 11111100000000 000134443 222321 11100 000000000 No 11 >protein:vir:3133 Length: 911 # NCBI annotation: hypothetical protein # Family: family:all:5234 # MgeID: mge:64 # MgeName: VpV262 # Cross-refs: genbank:acc:NP_640315;genbank:gi:21234408;genbank:GeneID:956056 Probab=98.86 E-value=1.6e-08 Score=63.28 Aligned_cols=452 Identities=13% Similarity=0.173 Sum_probs=189.3 Q ss_pred Cccceeehhhh-ccceeeccccc-cceeeeEEEecccccccCccchhcCccccc------ceEEe--eee--cCCeEeEe Q lcl|Aclame:pro 1 MMPIAILANSI-INPLIFKPEAV-KGISMPYIDITTMRGMMPRVVTSMLPEHSA------VLAED--CHF--RFGVITPE 68 (567) Q Consensus 1 ~~~~~~~~~~~-~~~~~~~~~~~-~~~~M~~I~i~~f~G~~pr~~p~lL~~~~a------~~A~N--~~~--~~G~l~P~ 68 (567) ++-|-+|-.-| ++-+|-.|-.| -|.+.+.|. +||+.|-|++-+-. +++.. +-| .+--|+|+ T Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (911) T protein:vir:31 114 LLTIDLLEAGIKLDGVIDSPVHISVGVGFAIIT-------NPRIEPVLIKLDDVDDEGVPTLSYEPLTLLIRTRELLTPY 186 (911) T ss_pred EEEeeeeccCceeeeeecCceeEEeeceEEEee-------cCccceEEEEeeccCccCcccccccceeeEeeehhhcccc Confidence 22232222111 23333344333 244444442 67777776652111 00000 000 11122333 Q ss_pred eccccccccccccceEEEEECCceEEeeCCeEEEeeCCCCCCCcceEEEcCCCeeeeeeccccccCCcccccccccccCC Q lcl|Aclame:pro 69 RQISGVEKTFTIKPKTIFHYRDDFWFAWPDVVDVIRSPIAQDPHGRIYYTDGRFPKVTDATIATKGDGNHPTSSYRLGIP 148 (567) Q Consensus 69 ~~~~~v~~~~~~~~~Tif~~~~~~w~~w~~~V~~~~spia~D~~~Rvy~tgd~~p~~t~~~iat~g~g~~p~~~y~LgVp 148 (567) ..-..-+.++ .+.--|..-...|-.-.+..+ -+|. -+.||...- +-..---|+||+-+- T Consensus 187 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~-~~~~-----~~~~~~~~~--------~~~~~~~~~~~~~~~----- 245 (911) T protein:vir:31 187 TTGTNYGDTL--TPEEEWNLYNSGWATITRATK-DKSG-----SGTVYVNPV--------QYYFDKRGVYPSHSV----- 245 (911) T ss_pred ccccccCccc--Cchhhcccccccceeeeeecc-cCCc-----cceEEEchh--------heeecccCcCcchhh----- Confidence 2222222111 111111111222222111111 0000 012322110 000001122322110 Q ss_pred CCcccceeEecCCCCCCCCccccceeeEEEEEEEecCCCccCCcccceeEEEec--CCCEEEEccccCCCCCCccceEEE Q lcl|Aclame:pro 149 APTTAPVCTVQQGGDVSDDNPNDDETRFYTETFVSDYGEEGPPGPASLEVTLRT--PGTAVQLTLAPVPLQNASIKRRRI 226 (567) Q Consensus 149 aP~~ap~~~v~~g~~~~g~~~~d~et~~Y~~TfVt~~GeES~pS~~S~~v~v~~--~g~~V~L~~~p~~~~~~~it~~RI 226 (567) ..++.-+||+---+ .+.+-+ .+.+|++.-.. ||-++-| |-.- T Consensus 246 --------------------------------~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~ 289 (911) T protein:vir:31 246 --------------------------------LYNSMKQESAKEIV--ALNVFSPWADEKINFGTTT-PPLGRYI-HSAY 289 (911) T ss_pred --------------------------------hhhhhhhhccceeE--EEeeeccccccccccccCC-Cchhhhh-hhhe Confidence 01233334322211 111111 12234433222 2222212 1111 Q ss_pred EEEEcCCCCeeEEEEEeccCceeeEEeccCccccCcccchhhccCCCCCCceee------------------------ee Q lcl|Aclame:pro 227 YRSASGGGEADFLLVAELDASVLSYTDKIPAKNLGPSLATWDYLPPPENMTGLC------------------------LM 282 (567) Q Consensus 227 YRs~tggg~~e~~lVael~~st~sy~D~~~~~~Lg~~L~t~~~~~Pp~~~~~l~------------------------~~ 282 (567) |- --.|-|..+..+.+-..++...-..=|+.+-..-|-|+..|- .+ T Consensus 290 ~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~e~~np~gl~~igt~~n~k~~a~~~~~~~~~~r~r~~~~ 359 (911) T protein:vir:31 290 YF----------DSAAILSLGIGNLTPPTSDGTTEGSGPAEEEISNPIGLDNIGTVNNLKLIAEGTVRWTVKDRPRCSGY 359 (911) T ss_pred ee----------ccceeeeecccccCCCCCCCccCCCCCchhhhcCCCCcccccchhceeeeeccceeeeecccccceee Confidence 10 001111111112221222211100112333333443432222 25 Q ss_pred cCcEEEEEE-----CCEEEEecC-----CCcccC--------------chhh-ceecc--cceEEEEEeCCeEEEEEcCc Q lcl|Aclame:pro 283 ANGIAAGFA-----GNEVMFSEA-----YLPYAW--------------PEVN-RHTTA--EDIVAICPLGTSLVVATKGE 335 (567) Q Consensus 283 ~NG~l~~a~-----Gn~l~FSEp-----~~Phaw--------------p~~y-~~~~~--~~Iv~i~pv~~gl~V~T~~~ 335 (567) .|||++-++ +|.|+||.- +.++-+ .... ++..+ ++|+.|..++++|.|.+++. T Consensus 360 yaGRVfyaD~dkngk~rIlFSqLv~sl~di~nCYQdaDPTSeee~DLIdTDGg~vri~gah~Ii~LV~~G~sLlVFcaNG 439 (911) T protein:vir:31 360 HNGHVYFGDRDKNGKTRILVSQLVNSLDNIPKCFQDADPTAEEINDLIATDGFTMYPVGMGAPITMVEFNKRLLLLCTNG 439 (911) T ss_pred eccEEEEeeeccCcceeEEEEeeccccccccccccCCCccccccchhhhcCCcEEecCCCCCceEEEEecCeEEEEEeCc Confidence 577777664 468999942 223222 1122 23333 77999999999999999999 Q ss_pred EEEEEcCCcc-----cceeEeecccCCcccccceeecCceEEEecCCcEEEEcCCceeEeecccccchhHHhhhcC--cc Q lcl|Aclame:pro 336 PYLFSGVSPS-----TISGSKIPSMQACLSRRSMVAMEGFVLYAGTNGLVSVDANGNVALATEQIVSPEQWQSQFN--PA 408 (567) Q Consensus 336 py~lsG~~p~-----~m~~~~l~~~~pcvs~~siv~~~~~v~y~s~dGlv~~~~~G~~~~vt~~~~~~~~W~~~l~--P~ 408 (567) +|.+.|.+|- +....|+.. -.|.+..|+|+.|+.++|.|.+|+|.++.+ +....+++.+|.++.|.-++ |. T Consensus 440 VWAI~G~d~~g~TATdy~ItKIsd-vGcsspNSVVvVgn~i~fWSd~GIyaLgan-qfnD~tAnNLTesTIQ~y~d~I~~ 517 (911) T protein:vir:31 440 VWAIRGTSGGGATATDFTLDKVAS-VEFNSPQSVVDIGTAIVFWSERGIIAIGVN-DFGDLTSNNLTENTIDEYYDSLDR 517 (911) T ss_pred EEEEeccCCCceeeeeeEEEEEee-eeeCCCCeEEEecCceEEeeCCcEEEEeec-ccCccccccccHHHHHHHHhhcCh Confidence 9999999876 346778766 499999999999999999999999999988 58899999999666554333 34 Q ss_pred c-E--EEEEE---cCeEEEEEec-CCCcce-------eEEEccCCceeEEEeeeeeEEEEEecCCeEEEEeCCEEEEEcC Q lcl|Aclame:pro 409 S-I--VAYPW---RGEYIACYTK-PDGKQD-------VFVFSPVNMDIRYLSTPFDCAWVDLAKDMMRVVTGDKMSVLAG 474 (567) Q Consensus 409 t-i--~a~~~---~G~Y~~~y~~-~~g~~~-------~~ifd~~~~~~~~~~~~~~a~~~~~~~d~ly~~~g~~i~~~~~ 474 (567) + | +.+.| |+||+-+|-+ .|+... .|+||+.-+.++.... T Consensus 518 dkIkNVtgtyd~de~rVyW~yPn~lDe~teykt~~~~ILVfdLatgaFYPwtv--------------------------- 570 (911) T protein:vir:31 518 DIIKNVKGTFINDENRVYWVVPNKQDSNGEYKTDGELVLVLNLDTGGFYKHTV--------------------------- 570 (911) T ss_pred hhhceEEEEEEccCCEEEEEecCccCCccceeecCceEEEEEeccCcccceee--------------------------- Confidence 4 3 55667 8999999975 333211 3455555444432211 Q ss_pred CCCce-eEEEEeeeEEcCCCCcee------EEEEeeCCcCceEEEEEECCeeeEeecCcccCCcceEcCCcc-------- Q lcl|Aclame:pro 475 GALPS-TIRWHSKIFSLPERTSFS------CIRVKSPAPERVGITIMADDVPVIHFAPGTFKGSVVRLPAAT-------- 539 (567) Q Consensus 475 g~~~~-~~~WrSK~f~~~~~~~f~------~~~V~~~~~~~~~~~i~~d~~~~~~~~~~~~~~~~~RLP~~~-------- 539 (567) ...|+ ..-.+ |.-.+.++++-- ++.++. ...+|.++...|.-.+.. +..|=+.| T Consensus 571 s~gpLl~~p~y-~Lv~TreEvtvPi~~etgaiIve~-gsdPV~~tl~vdttGvDg---------~ayLl~frdg~~g~~~ 639 (911) T protein:vir:31 571 SGGPLLHAPFR-RLVNTRAEVSIPITETDGTVITDT-LGDPVTVTRTVTTTGVDG---------LAYFASFDDGVNGQFN 639 (911) T ss_pred ecceeeccccc-ccccccccceeeEEeecceEEEec-CCCCeEEEEeeecccccc---------eeEEEeeccCCcceEE Confidence 11111 01111 333333333331 122222 234566665544433211 11111111 Q ss_pred ----cceEEEEEEecceE-EEEEeecchhhhcC Q lcl|Aclame:pro 540 ----GQNWQVMVSGFGQV-ERITLSTSMSEMPV 567 (567) Q Consensus 540 ----~~~wqiei~g~~~V-~~i~la~s~~EL~~ 567 (567) .|-|-+-=.|+.+- +|+- =+|+.|.-- T Consensus 640 f~a~~~~~~~~dw~~~~~~~~~~-y~s~~~~~y 671 (911) T protein:vir:31 640 FIAEHQPWGFADWANVPNMTRVN-YSSYVDFAY 671 (911) T ss_pred EEEeecCCeeeccccCccccccc-hhHHHHhhh Confidence 12244433344221 1111 122222211 No 12 >protein:vir:63741 Length: 468 # NCBI annotation: Cps # Family: family:all:2450 # MgeID: mge:1517 # MgeName: P100 # Cross-refs: genbank:gi:82547622;genbank:GeneID:3783474 Probab=98.58 E-value=1.3e-09 Score=69.35 Aligned_cols=231 Identities=16% Similarity=0.175 Sum_probs=90.3 Q ss_pred Cccceeehh---hhccc-eeeccccccceeeeEEEecccccccCccchhcCcccccceEEeeeecCCeEeEeeccccccc Q lcl|Aclame:pro 1 MMPIAILAN---SIINP-LIFKPEAVKGISMPYIDITTMRGMMPRVVTSMLPEHSAVLAEDCHFRFGVITPERQISGVEK 76 (567) Q Consensus 1 ~~~~~~~~~---~~~~~-~~~~~~~~~~~~M~~I~i~~f~G~~pr~~p~lL~~~~a~~A~N~~~~~G~l~P~~~~~~v~~ 76 (567) +||+.+-|+ +...| +.+-. =+.+.++.-.|+ .|.+++ ++ T Consensus 219 ~~~~~v~a~~~~~~L~~q~~v~~---------------------------~n~~~~~~G~~v---~g~~sa-~G------ 261 (468) T protein:vir:63 219 YMPVGVQADFVNQQLSKQTQLVR---------------------------DNGNNVSVGFNI---QGFHSA-RG------ 261 (468) T ss_pred hcchhHHhhhhhhhcCceEEEEc---------------------------CCCCceeeeecc---cceecc-ee------ Confidence 666665443 22222 11100 001222222233 122222 11 Q ss_pred cccccceEEEEECCceEEeeCCeEEEeeCCCCCCCcceEEEcCCCeeeeeeccccccCCcccccccccccCCCCccccee Q lcl|Aclame:pro 77 TFTIKPKTIFHYRDDFWFAWPDVVDVIRSPIAQDPHGRIYYTDGRFPKVTDATIATKGDGNHPTSSYRLGIPAPTTAPVC 156 (567) Q Consensus 77 ~~~~~~~Tif~~~~~~w~~w~~~V~~~~spia~D~~~Rvy~tgd~~p~~t~~~iat~g~g~~p~~~y~LgVpaP~~ap~~ 156 (567) .|+.-+|=| .|+.... +-... +..+ .|.|..... T Consensus 262 ----------------------~I~l~gs~i----------l~~~~~l--~~~~~--~~~~---------Apsp~~vsa- 295 (468) T protein:vir:63 262 ----------------------FIKLHGSTV----------MENEQIL--DERIL--ALPT---------APQPAKVTA- 295 (468) T ss_pred ----------------------eeeecCcee----------eccccCC--Ccccc--cccc---------cccCCccce- Confidence 111111111 1111000 00000 0000 122221111 Q ss_pred EecCCCCCCCCccccceeeEEEEEEEecCCCccCCcccceeEEEecCCCEEEEccccCCCCCCccceEEEEEEEcCCCCe Q lcl|Aclame:pro 157 TVQQGGDVSDDNPNDDETRFYTETFVSDYGEEGPPGPASLEVTLRTPGTAVQLTLAPVPLQNASIKRRRIYRSASGGGEA 236 (567) Q Consensus 157 ~v~~g~~~~g~~~~d~et~~Y~~TfVt~~GeES~pS~~S~~v~v~~~g~~V~L~~~p~~~~~~~it~~RIYRs~tggg~~ 236 (567) +...+. .+....++.-++.|++++|++.| ||+||++ ..++|.+.++.+.|+.-+.+..+..-+.++|||+..++ + T Consensus 296 T~~~~~-~g~~~~~~~a~y~Y~v~~vs~~G-ES~pS~~-vtvTVaa~~dg~~ltIt~~~~~~~~p~yv~IYR~~~gg--~ 370 (468) T protein:vir:63 296 TQEAGK-KGQFRAEDLAAHEYKVVVSSDDA-ESIASEV-ATATVTAKDDGVKLEIELAPMYSSRPQFVSIYRKGAET--G 370 (468) T ss_pred eeeccc-CCcccCCCcceEEEEEEEECCCC-ccccccc-eEEEecCcccceeEEEEecCCCCCcceEEEEEEeCCCC--c Confidence 111111 12222345557999999999999 9999983 45555554444444443333222234679999997554 6 Q ss_pred eEEEEEeccCc-----eeeEEeccCcc---------ccCcccchhhccCCCCCCceeeeecCcEEEEEECCEEEEecCCC Q lcl|Aclame:pro 237 DFLLVAELDAS-----VLSYTDKIPAK---------NLGPSLATWDYLPPPENMTGLCLMANGIAAGFAGNEVMFSEAYL 302 (567) Q Consensus 237 e~~lVael~~s-----t~sy~D~~~~~---------~Lg~~L~t~~~~~Pp~~~~~l~~~~NG~l~~a~Gn~l~FSEp~~ 302 (567) +|+|+++.+.+ +.+|.|..+.. ++.+ .+..|...-+-+|.-.+.-|+. ...-++||--+.. T Consensus 371 ~f~li~~va~~~a~~gt~tf~D~n~~iPgT~~~fVgem~~--~~i~~~~llpm~~lplA~~n~~---~~~~Vl~Ygalal 445 (468) T protein:vir:63 371 LFYLIARVPASKAENNVITFYDLNDSIPETVDVFVGEMSA--NVVHLFELLPMMRLPLAQINAS---VTFAVLWYGALAL 445 (468) T ss_pred ceeEeeeEeeeecCCCeEEEEcCCcccCCCcceeeeecCh--hHHHHHHHhccccCChhHhccc---hhhhhhhhhHHhh Confidence 99999877543 55899876553 1221 1222222111122111222321 1123344431111 Q ss_pred cccCchhh-ceecccceEEEEEeCCeEEEEEc Q lcl|Aclame:pro 303 PYAWPEVN-RHTTAEDIVAICPLGTSLVVATK 333 (567) Q Consensus 303 Phawp~~y-~~~~~~~Iv~i~pv~~gl~V~T~ 333 (567) + -|+++ ++.- | .-.||++-- .. T Consensus 446 -~-~Pk~~~~ikN---v-~~~~~~~~~---~~ 468 (468) T protein:vir:63 446 -R-APKKWVRIRN---V-KYIPVKNVH---SN 468 (468) T ss_pred -h-ccccceEEEE---e-eeeeecccc---CC Confidence 1 15554 2221 1 111111100 00 No 13 >protein:vir:80491 Length: 467 # NCBI annotation: Cps # Family: family:all:2450 # MgeID: mge:1883 # MgeName: A511 # Cross-refs: genbank:acc:YP_001468466;genbank:gi:157325041;genbank:GeneID:5601449 Probab=98.57 E-value=1.3e-09 Score=69.23 Aligned_cols=231 Identities=16% Similarity=0.175 Sum_probs=90.3 Q ss_pred Cccceeehh---hhccc-eeeccccccceeeeEEEecccccccCccchhcCcccccceEEeeeecCCeEeEeeccccccc Q lcl|Aclame:pro 1 MMPIAILAN---SIINP-LIFKPEAVKGISMPYIDITTMRGMMPRVVTSMLPEHSAVLAEDCHFRFGVITPERQISGVEK 76 (567) Q Consensus 1 ~~~~~~~~~---~~~~~-~~~~~~~~~~~~M~~I~i~~f~G~~pr~~p~lL~~~~a~~A~N~~~~~G~l~P~~~~~~v~~ 76 (567) +||+.+-|| +...| +.+-. =+.+.++.-.|+ .|.+++ ++ T Consensus 218 ~~p~~v~a~~~~~~L~~q~~v~~---------------------------~n~~~~~~G~~v---~g~~sa-~G------ 260 (467) T protein:vir:80 218 YMPVGVQADFVNQQLSKQTQLVR---------------------------DNGNNVSVGFNI---QGFHSA-RG------ 260 (467) T ss_pred hcchhHHhhhhhhhcCceEEEEc---------------------------CCCCceeeeecc---cceecc-ee------ Confidence 666665443 22222 11100 001222222233 122222 11 Q ss_pred cccccceEEEEECCceEEeeCCeEEEeeCCCCCCCcceEEEcCCCeeeeeeccccccCCcccccccccccCCCCccccee Q lcl|Aclame:pro 77 TFTIKPKTIFHYRDDFWFAWPDVVDVIRSPIAQDPHGRIYYTDGRFPKVTDATIATKGDGNHPTSSYRLGIPAPTTAPVC 156 (567) Q Consensus 77 ~~~~~~~Tif~~~~~~w~~w~~~V~~~~spia~D~~~Rvy~tgd~~p~~t~~~iat~g~g~~p~~~y~LgVpaP~~ap~~ 156 (567) .|+.-+|=| .|+.... +-... +..+ .|.|..... T Consensus 261 ----------------------~I~l~gs~i----------l~~~~~l--~~~~~--~~~~---------Apsp~~vsa- 294 (467) T protein:vir:80 261 ----------------------FIKLHGSTV----------MENEQIL--DERIL--ALPT---------APQPAKVTA- 294 (467) T ss_pred ----------------------eeeecCcee----------eccccCC--Ccccc--cccc---------cccCCccce- Confidence 111111111 1111000 00000 0000 122221111 Q ss_pred EecCCCCCCCCccccceeeEEEEEEEecCCCccCCcccceeEEEecCCCEEEEccccCCCCCCccceEEEEEEEcCCCCe Q lcl|Aclame:pro 157 TVQQGGDVSDDNPNDDETRFYTETFVSDYGEEGPPGPASLEVTLRTPGTAVQLTLAPVPLQNASIKRRRIYRSASGGGEA 236 (567) Q Consensus 157 ~v~~g~~~~g~~~~d~et~~Y~~TfVt~~GeES~pS~~S~~v~v~~~g~~V~L~~~p~~~~~~~it~~RIYRs~tggg~~ 236 (567) +...+. .+....++.-++.|++++|++.| ||+||++ ..++|.+.++.+.|+.-+.+..+..-+.++|||+..++ + T Consensus 295 T~~~~~-~g~~~~~~~a~y~Y~v~~vs~~G-ES~pS~~-vtvTVaa~~dg~~ltIt~~~~~~~~p~yv~IYR~~~gg--~ 369 (467) T protein:vir:80 295 TQEAGK-KGQFRAEDLAAHEYKVVVSSDDA-ESIASEV-ATATVTAKDDGVKLEIELAPMYSSRPQFVSIYRKGAET--G 369 (467) T ss_pred eeeccc-CCcccCCCcceEEEEEEEECCCC-ccccccc-eEEEecCcccceeEEEEecCCCCCcceEEEEEEeCCCC--c Confidence 111111 12222345557999999999999 9999983 45555554444444443333222234679999997554 6 Q ss_pred eEEEEEeccCc-----eeeEEeccCcc---------ccCcccchhhccCCCCCCceeeeecCcEEEEEECCEEEEecCCC Q lcl|Aclame:pro 237 DFLLVAELDAS-----VLSYTDKIPAK---------NLGPSLATWDYLPPPENMTGLCLMANGIAAGFAGNEVMFSEAYL 302 (567) Q Consensus 237 e~~lVael~~s-----t~sy~D~~~~~---------~Lg~~L~t~~~~~Pp~~~~~l~~~~NG~l~~a~Gn~l~FSEp~~ 302 (567) +|+|+++.+.+ +.+|.|..+.. ++.+ .+..|...-+-+|.-.+.-|+. ...-++||--+.. T Consensus 370 ~f~li~~va~~~a~~gt~tf~D~n~~iPgT~~~fVgem~~--~~i~~~~llpm~~lplA~~n~~---~~~~Vl~Ygalal 444 (467) T protein:vir:80 370 LFYLIARVPASKAENNVITFYDLNDSIPETVDVFVGEMSA--NVVHLFELLPMMRLPLAQINAS---VTFAVLWYGALAL 444 (467) T ss_pred ceeEeeeEeeeecCCCeEEEEcCCcccCCCcceeeeecCh--hHHHHHHHhccccCChhHhccc---hhhhhhhhhHHhh Confidence 99999877543 55899876553 1221 1222222111122111222321 1123344431111 Q ss_pred cccCchhh-ceecccceEEEEEeCCeEEEEEc Q lcl|Aclame:pro 303 PYAWPEVN-RHTTAEDIVAICPLGTSLVVATK 333 (567) Q Consensus 303 Phawp~~y-~~~~~~~Iv~i~pv~~gl~V~T~ 333 (567) + -|+++ ++.- | .-.||++-- .. T Consensus 445 -~-~Pk~~~~ikN---v-~~~~~~~~~---~~ 467 (467) T protein:vir:80 445 -R-APKKWVRIRN---V-KYIPVKNVH---SN 467 (467) T ss_pred -h-ccccceEEEE---e-eeeeecccc---CC Confidence 1 15554 2221 1 111111100 00 No 14 >protein:vir:2625 Length: 715 # NCBI annotation: gp27 # Family: family:all:5234 # MgeID: mge:55 # MgeName: SIO1 # Cross-refs: genbank:acc:NP_064766;genbank:gi:9964636;genbank:GeneID:1263056 Probab=98.56 E-value=2.7e-07 Score=56.55 Aligned_cols=410 Identities=15% Similarity=0.135 Sum_probs=175.1 Q ss_pred CccceeehhhhccceeeccccccceeeeEEEecccccccCccchhcCcccccceEEeeeecCCeE----eEeecccccc- Q lcl|Aclame:pro 1 MMPIAILANSIINPLIFKPEAVKGISMPYIDITTMRGMMPRVVTSMLPEHSAVLAEDCHFRFGVI----TPERQISGVE- 75 (567) Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~M~~I~i~~f~G~~pr~~p~lL~~~~a~~A~N~~~~~G~l----~P~~~~~~v~- 75 (567) +--.+|+||.-|||..||=.. +. .+-.+.---++.=.+ .|++.-.+.. T Consensus 137 ~~G~livanp~i~~~~~~~d~------~t---------------------~s~t~~~ll~r~r~f~~qg~d~~~g~~y~~ 189 (715) T protein:vir:26 137 LNGYLIVASPAINTFYLGFNT------ST---------------------EAFTATSISFKERDFEWQGSDVDVTSLYFG 189 (715) T ss_pred eeeEEEEecCCccEEEEEecC------Cc---------------------ceeEeeEEEEEeeeheeecccccccccccc Confidence 224567888888888776443 00 011111111111100 2333222220 Q ss_pred ccccccceEEEEECCceEEeeCCeEEEeeCCCCCCCcceEEEcCCCeeeeeeccccccCCcccccccccccCCCCcccce Q lcl|Aclame:pro 76 KTFTIKPKTIFHYRDDFWFAWPDVVDVIRSPIAQDPHGRIYYTDGRFPKVTDATIATKGDGNHPTSSYRLGIPAPTTAPV 155 (567) Q Consensus 76 ~~~~~~~~Tif~~~~~~w~~w~~~V~~~~spia~D~~~Rvy~tgd~~p~~t~~~iat~g~g~~p~~~y~LgVpaP~~ap~ 155 (567) .--+..++-||-.....|-. ..+.+.-.|.. ++. || |.. .+.+++..=.=++=.|.+-. T Consensus 190 ~gt~~tn~~iynlyN~gw~~--p~gt~~~N~~~-~yi--Vy------pa~---------s~~~~S~kd~n~afsk~ad~- 248 (715) T protein:vir:26 190 EGTSVSNQRIYDTYNVGWVG--PKGSAALNTYG-SYI--VY------PAL---------THPWYSGKDANGAFNKADWL- 248 (715) T ss_pred CCcccCchhheecccceeec--ceeEEEEcCCC-Cce--Ee------ccc---------ccccCCCcccccccChhhcc- Confidence 00122445577666777766 23332222222 111 11 110 01111100000000111101 Q ss_pred eEecCCCCCCCCccccceeeEEEEEEEecCCCccCCcccceeEEEe------cCCCEEEEccccCCCCCCccceEEEEEE Q lcl|Aclame:pro 156 CTVQQGGDVSDDNPNDDETRFYTETFVSDYGEEGPPGPASLEVTLR------TPGTAVQLTLAPVPLQNASIKRRRIYRS 229 (567) Q Consensus 156 ~~v~~g~~~~g~~~~d~et~~Y~~TfVt~~GeES~pS~~S~~v~v~------~~g~~V~L~~~p~~~~~~~it~~RIYRs 229 (567) .+..|...+ .-+.|+- ++.--+-+++..+|.-. .=.++|-..++.-.-+ +-|||-| T Consensus 249 -ei~tGt~~~-------~~G~yi~-----D~~~~g~~~leeev~k~R~rsv~~yaGrV~yagiD~dkn-----g~rilfS 310 (715) T protein:vir:26 249 -EIYTGSSLA-------SNGHYVL-----DVFNKARTGLTTEVETGRFRSVAAYAGRVFYAGIDSAKN-----GGKVYFS 310 (715) T ss_pred -ccccccccc-------cCceEEE-----eeeecCCccchhhhhcCCCcceeeecceEEEeecccccC-----CCeEEEe Confidence 111222211 1234442 22222233333333210 0123344444331111 1245544 Q ss_pred EcCCCCeeEEEEEeccCceeeEEeccCcc-ccCcccchhhccCCCCCCceeeeecCcEEEEEECCEEEEecCCCcccCch Q lcl|Aclame:pro 230 ASGGGEADFLLVAELDASVLSYTDKIPAK-NLGPSLATWDYLPPPENMTGLCLMANGIAAGFAGNEVMFSEAYLPYAWPE 308 (567) Q Consensus 230 ~tggg~~e~~lVael~~st~sy~D~~~~~-~Lg~~L~t~~~~~Pp~~~~~l~~~~NG~l~~a~Gn~l~FSEp~~Phawp~ 308 (567) . ||-.++.--.-|.|.-+.. ++.+.++|+...+-| |- T Consensus 311 q---------Lv~s~~di~nCyQd~DPTsee~~dLidTDGg~iri-----------------------------~g---- 348 (715) T protein:vir:26 311 R---------LTERMSDVGNCYQVNDPTSEVLSDLLDTDGGVVRI-----------------------------PD---- 348 (715) T ss_pred h---------hhcchhhcccccccCCCchhhhhhhhhcCCCEEEe-----------------------------cC---- Confidence 2 3333433335566554432 233333333211111 11 Q ss_pred hhceecccceEEEEEeCCeEEEEEcCcEEEEEcCC----cccceeEeecccCCcccccceeecCceEEEecCCcEEEEcC Q lcl|Aclame:pro 309 VNRHTTAEDIVAICPLGTSLVVATKGEPYLFSGVS----PSTISGSKIPSMQACLSRRSMVAMEGFVLYAGTNGLVSVDA 384 (567) Q Consensus 309 ~y~~~~~~~Iv~i~pv~~gl~V~T~~~py~lsG~~----p~~m~~~~l~~~~pcvs~~siv~~~~~v~y~s~dGlv~~~~ 384 (567) .++|+.|.-++..|.|.++..+|.+.|++ --+....|+.. -.|.++.|+|+.|+.++|.|++|++.+.. T Consensus 349 ------ah~ii~Lv~f~~sLlvf~~NGVWAi~G~d~g~tATdY~ltKIs~-vg~sspnSvVvv~~~i~~WsdtGIyal~~ 421 (715) T protein:vir:26 349 ------AHNIRKLHVLGASLLVFAENGVWAVAGVDNVFRATEYAITRISD-VGLSNENSFVVADGIPIWWGKTGIYAVQQ 421 (715) T ss_pred ------CCCceeEEEecceEEEEEecceEEEeccCCceeeeeeEEEEeee-eccCCCccEEEecceEEEeeCCcEEEEEe Confidence 26799999999999999999999996665 33456777765 89999999999999999999999999998 Q ss_pred CceeEeecccccchhHHhhhcC--cccE---EEEEE---cCeEEEEEecCCCcceeEEEccCCceeEEEeeeeeEEEEEe Q lcl|Aclame:pro 385 NGNVALATEQIVSPEQWQSQFN--PASI---VAYPW---RGEYIACYTKPDGKQDVFVFSPVNMDIRYLSTPFDCAWVDL 456 (567) Q Consensus 385 ~G~~~~vt~~~~~~~~W~~~l~--P~ti---~a~~~---~G~Y~~~y~~~~g~~~~~ifd~~~~~~~~~~~~~~a~~~~~ 456 (567) +-....+|+|.+|.++.|+-++ |..+ ++++| |+||+-+|-+.+... -+=+| ..+..|+ T Consensus 422 Nd~fn~~tAqNLTekTIq~~~~~I~~dk~knVtg~fd~~e~rVyW~yPn~dt~v-dykyd-------------~vLV~dL 487 (715) T protein:vir:26 422 SENLNTPTAQNLSLSTIQTLWNNISNAKKAQVTVEYDKINQRVFWFYPDNDESV-DYKYN-------------NILVMDL 487 (715) T ss_pred ccccCcchhhccchHHHHHHHhhcchhhhcceEEEEEccCCEEEEEEcCCceee-ceeec-------------CeEEEEe Confidence 8658899999999776665444 4443 67777 899988883311110 00000 0233344 Q ss_pred cCCeEEEEeCCEEEEEcCCCCceeEEEEee------eEEcCCCCceeEEEEeeCC-cCceEEEEEECCeeeEeecCcccC Q lcl|Aclame:pro 457 AKDMMRVVTGDKMSVLAGGALPSTIRWHSK------IFSLPERTSFSCIRVKSPA-PERVGITIMADDVPVIHFAPGTFK 529 (567) Q Consensus 457 ~~d~ly~~~g~~i~~~~~g~~~~~~~WrSK------~f~~~~~~~f~~~~V~~~~-~~~~~~~i~~d~~~~~~~~~~~~~ 529 (567) +.+..|=-+=+. .+|. ++|.--|- .-.+..++ -+..+|.... ...|++. T Consensus 488 algaFYp~~v~~----~a~~--~~~~ig~~~~~~~~~~~t~~~v-v~~~~v~~~g~~~~v~~~----------------- 543 (715) T protein:vir:26 488 ALQAFYPWRVED----EASS--TSYIIGTSYYGGLGSTSTETQV-VNGADVVVNGSDNVVATL----------------- 543 (715) T ss_pred cccccccccccc----cccc--cceeeeeeeeCCcccccchhhe-eccceEEEeccceEEEEe----------------- Confidence 444333221110 1111 12211111 11112222 2222222211 1111110 Q ss_pred CcceEcCCcccceEEEEEEecceEEEEEeecchhhhcC Q lcl|Aclame:pro 530 GSVVRLPAATGQNWQVMVSGFGQVERITLSTSMSEMPV 567 (567) Q Consensus 530 ~~~~RLP~~~~~~wqiei~g~~~V~~i~la~s~~EL~~ 567 (567) .|=|-.+-.+..|-+ -...--+|++|+=-+|-=| T Consensus 544 ---~r~~~~~~~~~~~~~-~~~~~~~~~f~~~~~~~~~ 577 (715) T protein:vir:26 544 ---YRDYLEGDSEIKLLV-RDGTTGKMTFATFRGDTYL 577 (715) T ss_pred ---ecccccccceEEEEE-EcCCceeEEEecccCceee Confidence 111111111111111 1111122333332222222 No 15 >protein:vir:95475 Length: 771 # NCBI annotation: hypothetical protein ORF038 # Family: family:all:5234 # MgeID: mge:1570 # MgeName: PA11 # Cross-refs: genbank:acc:YP_001294631;genbank:gi:149408197;genbank:GeneID:5237042 Probab=98.39 E-value=8.8e-07 Score=53.78 Aligned_cols=455 Identities=14% Similarity=0.143 Sum_probs=179.1 Q ss_pred Cccceeehhhhccceeecccc-ccceeeeEEEecccccccCccchhcCcccccceEEeeeecCCeEeEeecccccccccc Q lcl|Aclame:pro 1 MMPIAILANSIINPLIFKPEA-VKGISMPYIDITTMRGMMPRVVTSMLPEHSAVLAEDCHFRFGVITPERQISGVEKTFT 79 (567) Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~-~~~~~M~~I~i~~f~G~~pr~~p~lL~~~~a~~A~N~~~~~G~l~P~~~~~~v~~~~~ 79 (567) .--.+|+||.-|||..||=.. -+-++--.|.|..--|..|-+ .-++++-|.+---+ +. . T Consensus 133 ~~G~livanp~i~~~~~~~d~~t~s~t~~~ll~r~rf~~q~~~-------------~G~d~~~~~~~~~~-----gt--~ 192 (771) T protein:vir:95 133 VDGLLVVANGSRDIYVFEYDSGSVSVTTKRLLVRDLFGVQDIV-------------NGVDLRQGNDIATR-----PT--V 192 (771) T ss_pred eeeEEEEecCCccEEEEEecCCcceeEeeeeeeeehhhccccc-------------cccceecccccccC-----Cc--c Confidence 234578889999998887543 000111111111111111100 01111111111111 11 2 Q ss_pred ccceEEEEECCceEEeeCCe--EEEeeCCCCC--CCcceEEEcCCCeeeeeeccccccCCcccccccccccCCCCcccce Q lcl|Aclame:pro 80 IKPKTIFHYRDDFWFAWPDV--VDVIRSPIAQ--DPHGRIYYTDGRFPKVTDATIATKGDGNHPTSSYRLGIPAPTTAPV 155 (567) Q Consensus 80 ~~~~Tif~~~~~~w~~w~~~--V~~~~spia~--D~~~Rvy~tgd~~p~~t~~~iat~g~g~~p~~~y~LgVpaP~~ap~ 155 (567) ..++-||-...+.|-.=.+. -.-..+||.+ -....+|+++.... |+.+ .+.+-. +-+.|.+=+|..--. T Consensus 193 ~tn~~iynlyN~gw~~pk~~~~snt~~~~iV~~y~a~~g~~pS~sd~~---N~a~-~k~~~~---Ei~t~~~f~~~~~~~ 265 (771) T protein:vir:95 193 QTNAHIYNLRNQTFGVPRVTWHSNEPSDPIVTFRSAASGKFPSNSDSV---NLAL-SKRADV---EPSTTDRFRAEDIVL 265 (771) T ss_pred cCchhheeccccceeccccccccCCccccceEeeeccCCCCcCCceee---cccc-chhhcc---ceeeecccchhhhhh Confidence 23455676666667621100 0001112211 00011222221100 0010 000000 112222223322110 Q ss_pred eEecCCCCCCCCccccceeeEEEE-EEEecCCC--------ccCCcccceeEEEecCCCEEEEccccCCCCCCc----cc Q lcl|Aclame:pro 156 CTVQQGGDVSDDNPNDDETRFYTE-TFVSDYGE--------EGPPGPASLEVTLRTPGTAVQLTLAPVPLQNAS----IK 222 (567) Q Consensus 156 ~~v~~g~~~~g~~~~d~et~~Y~~-TfVt~~Ge--------ES~pS~~S~~v~v~~~g~~V~L~~~p~~~~~~~----it 222 (567) ..-|...+ .-++|+. .|-...+. --.||..+... -|+....+. +.. .+ T Consensus 266 --~~~Gt~~~-------~~G~yi~da~~~g~~~Lt~~ve~~gr~~s~~~~~~---------~l~~~~t~~-~~~~vaeya 326 (771) T protein:vir:95 266 --NPIGTYET-------ARGFFIIDAMARGKSRLEEIVKLKQRYPSLSFGVS---------SLPQDETPG-GASVVCEYA 326 (771) T ss_pred --cccCcccc-------cCcceeeehhhhcccccceeeeccccchhhhcccc---------ccccccCCC-CceeEEeee Confidence 11111111 0122322 11111100 00111111111 111111111 111 11 Q ss_pred eEEEEEE--------EcCC-CCeeEEEEEec----cCceeeEEeccCcc-ccCcccchhhccCCCCCCceeeeecCcEEE Q lcl|Aclame:pro 223 RRRIYRS--------ASGG-GEADFLLVAEL----DASVLSYTDKIPAK-NLGPSLATWDYLPPPENMTGLCLMANGIAA 288 (567) Q Consensus 223 ~~RIYRs--------~tgg-g~~e~~lVael----~~st~sy~D~~~~~-~Lg~~L~t~~~~~Pp~~~~~l~~~~NG~l~ 288 (567) .|--|.- ..+| .--.|.|+..| +.--.-|.|.-+.. ++.+.++| T Consensus 327 gRvwYag~~~~~iD~dkng~~~~~~ilfSqLv~s~~di~nCyQd~DPTsee~~dLidT---------------------- 384 (771) T protein:vir:95 327 GRVWYAGFSGQIIDGDDQSPRLVSYILFSQLVDSPADIVNCYQDGDPTSTEEPELVDT---------------------- 384 (771) T ss_pred eeEEEecceeEEeeccccCCceeeeEeeehhhcchhhcccccccCCCchhhhhhhhhc---------------------- Confidence 2212311 0000 00112222222 11112233322211 11111111 Q ss_pred EEECCEEEEecCCCcccCchhhceecccceEEEEEeCCeEEEEEcCcEEEE-----EcCCcccceeEeecccCCcccccc Q lcl|Aclame:pro 289 GFAGNEVMFSEAYLPYAWPEVNRHTTAEDIVAICPLGTSLVVATKGEPYLF-----SGVSPSTISGSKIPSMQACLSRRS 363 (567) Q Consensus 289 ~a~Gn~l~FSEp~~Phawp~~y~~~~~~~Iv~i~pv~~gl~V~T~~~py~l-----sG~~p~~m~~~~l~~~~pcvs~~s 363 (567) +|-.++ +.=.++|+.|.-++..|.|.++..+|.+ .|.+--+....|+.. -.|.++.| T Consensus 385 --DGg~ir---------------i~gah~ii~Lv~f~~sLlvfc~NGVWAi~ggsd~g~tAtdY~ltKIs~-vg~sspnS 446 (771) T protein:vir:95 385 --DGGFIR---------------IEGAHDIINLVNVGSAVMVVAANGIWMIQGGSDYGFTATNYLVTKISE-HGCSSPNS 446 (771) T ss_pred --CCCEEE---------------ecCCCCceeEEEecceEEEEEecceEEEEeccCCceeeeeeEEEEeee-eccCCCcc Confidence 111111 1112789999999999999999999999 444555667888766 89999999 Q ss_pred eeecCceEEEecCCcEEEEcCCceeEeecccccchhHHhhhcC--cccE---EEEEE---cCeEEEEEecCCCcceeEEE Q lcl|Aclame:pro 364 MVAMEGFVLYAGTNGLVSVDANGNVALATEQIVSPEQWQSQFN--PASI---VAYPW---RGEYIACYTKPDGKQDVFVF 435 (567) Q Consensus 364 iv~~~~~v~y~s~dGlv~~~~~G~~~~vt~~~~~~~~W~~~l~--P~ti---~a~~~---~G~Y~~~y~~~~g~~~~~if 435 (567) +|+.|+.++|.|++|++.++.+ +...+|+|.+|.++.|+-++ |..+ ++++| |+||+-+|-+--+.++ T Consensus 447 vVvvg~~i~ywsdtgIyal~~N-dfn~~tAqnLTekTIq~~~~~I~~dk~knVtg~fd~~e~rvyw~yPn~~D~~~---- 521 (771) T protein:vir:95 447 VVVVDNSFMYWGDDGIYHLTRN-QYGDYVANNLTEKTIQKYYEKIPSDAILNATGFYDSYDKKVKWLYNTVLDGRT---- 521 (771) T ss_pred EEEecceEEEeeCCceEEEeec-ccCcchhhccchHHHHHHHhhcchhhhcceEEEEEccCCEEEEEecceecCCC---- Confidence 9999999999999999999988 59999999999777665444 5543 67777 8999888852211111 Q ss_pred ccCCceeEEEeeeeeEEEEEecCCeEEEEeCCEEEEEcCCCCceeEEEEe------eeEEcCCCCceeEEEEeeCC-cCc Q lcl|Aclame:pro 436 SPVNMDIRYLSTPFDCAWVDLAKDMMRVVTGDKMSVLAGGALPSTIRWHS------KIFSLPERTSFSCIRVKSPA-PER 508 (567) Q Consensus 436 d~~~~~~~~~~~~~~a~~~~~~~d~ly~~~g~~i~~~~~g~~~~~~~WrS------K~f~~~~~~~f~~~~V~~~~-~~~ 508 (567) ..+ .-+..|++.+..|=.+=+. ..+| ++++.--| |...+.++++-...+|.+.. +.. T Consensus 522 ----e~~-------t~LV~dLalgaFYp~~i~~---~~ag--~l~~~vg~~~~p~~~lv~T~~eV~v~~~~v~~tG~~vt 585 (771) T protein:vir:95 522 ----EPV-------TELVFDLALGAFYPSKIGS---LTAG--RLPIPVGSVKIPPYKLVETGEEVTVASEQVTATGELVT 585 (771) T ss_pred ----cce-------eeeeeeecccccccccccc---cccC--ccceeeeeeecCccccccccceEEecceeeEecCCceE Confidence 111 0033333333333221000 0111 22222111 23334455666666665542 222 Q ss_pred eEEEE---EECCeeeEeecCcccCCcceEcCCcccceEEEEEEecceEEEEE-eecchhhhc------------C Q lcl|Aclame:pro 509 VGITI---MADDVPVIHFAPGTFKGSVVRLPAATGQNWQVMVSGFGQVERIT-LSTSMSEMP------------V 567 (567) Q Consensus 509 ~~~~i---~~d~~~~~~~~~~~~~~~~~RLP~~~~~~wqiei~g~~~V~~i~-la~s~~EL~------------~ 567 (567) |+... ..|+.... ....++.+-|+-=+-.+.|++-=.++.. .|. =+.|.-|-- + T Consensus 586 V~~~~r~~~~~~~~y~---~~~~dg~~g~~~Fa~~~~~~f~DW~sv~--~~~vdy~sy~~~gY~~~gd~~~~k~~ 655 (771) T protein:vir:95 586 VKVSTRSPVIRETKYI---IVEKLSSPMRISFGGYTDEEFVDWKSVD--GIGVDAPAYLLTGYLAGGDYQREKFV 655 (771) T ss_pred EEEEEeeccccceEEE---EEEecCCCeeEEeccccCcceeecccCC--CcccchHHHHHhhhhccchheeeecc Confidence 32221 12221111 1111222222222233456655444321 111 111111110 0 No 16 >protein:vir:108312 Length: 458 # NCBI annotation: hypothetical protein # Family: family:all:1540 # MgeID: mge:2007 # MgeName: BA3 # Cross-refs: genbank:acc:YP_001552278;genbank:gi:160700603;genbank:GeneID:5758828 Probab=98.22 E-value=2.4e-06 Score=51.43 Aligned_cols=389 Identities=11% Similarity=0.065 Sum_probs=198.7 Q ss_pred eeeccccccCCcccccccccccCCCCcccceeEecCCCCCCCCccccceeeEEEEEEEecCCCccCCcccceeEEEecCC Q lcl|Aclame:pro 125 VTDATIATKGDGNHPTSSYRLGIPAPTTAPVCTVQQGGDVSDDNPNDDETRFYTETFVSDYGEEGPPGPASLEVTLRTPG 204 (567) Q Consensus 125 ~t~~~iat~g~g~~p~~~y~LgVpaP~~ap~~~v~~g~~~~g~~~~d~et~~Y~~TfVt~~GeES~pS~~S~~v~v~~~g 204 (567) +....| ..++....+...|++ -.+.+.=..+|++. |..-....|| T Consensus 1 m~~~~i----------------------------p~gsy~a~~~~~daq---~~VN~yp~~~e~g~----ss~~l~~tPG 45 (458) T protein:vir:10 1 MVQRQI----------------------------PLVATTAEGDVSGQE---ILVNVYPRKSDGGK----YPFTLRHTPG 45 (458) T ss_pred Cceeee----------------------------ceeeeecccccccce---eeeeeeeecccccc----cccceEecCC Confidence 111111 111111111111110 11222222233221 2222345566 Q ss_pred CEEEEccccCCC-C------C--CccceEEEEEEEcCCCCeeEEEEEeccCcee-eEEeccCcccc--Cc---------- Q lcl|Aclame:pro 205 TAVQLTLAPVPL-Q------N--ASIKRRRIYRSASGGGEADFLLVAELDASVL-SYTDKIPAKNL--GP---------- 262 (567) Q Consensus 205 ~~V~L~~~p~~~-~------~--~~it~~RIYRs~tggg~~e~~lVael~~st~-sy~D~~~~~~L--g~---------- 262 (567) .+.... ++..| . + -++....|||-..++ .+..+++++.+-. +..|+...... |. T Consensus 46 l~~f~~-~~~~~~~g~~~~~g~ly~v~g~~LY~V~~~~---~~~~iG~i~gsg~VsMa~ng~q~vi~~G~~gY~yd~at~ 121 (458) T protein:vir:10 46 LAFFCE-LPTFPVMAMHQNGSRAFAVTPRDMYEISKDG---TYKRLGSVDFKGRVVMEDNGKQIVMVDGEKGYYYDSETE 121 (458) T ss_pred ceeeec-CCCCceeeEEecCCEEEEeeCceEEEEeCCc---eEEEEecccCceeEEEeeCCcEEEEEECCeEEEEeeccc Confidence 644432 22111 0 1 234566777754443 3456666665433 44454421100 11 Q ss_pred ccchhhccCCCCCCceeeeecCcEEEEE-ECCE-EEEecCCCcccC-chhh--ceecccceEEEEEeCCeEEEEEcCcE- Q lcl|Aclame:pro 263 SLATWDYLPPPENMTGLCLMANGIAAGF-AGNE-VMFSEAYLPYAW-PEVN--RHTTAEDIVAICPLGTSLVVATKGEP- 336 (567) Q Consensus 263 ~L~t~~~~~Pp~~~~~l~~~~NG~l~~a-~Gn~-l~FSEp~~Phaw-p~~y--~~~~~~~Iv~i~pv~~gl~V~T~~~p- 336 (567) .+. ..+..-=.+.+.++ +-.|++..- .|+. ..-|+ +.--.| |.+| ----|+.|++|...-+-||+.-+... T Consensus 122 ~~~-~i~d~~~~~~~~v~-~~dGy~V~~~~g~~~~~is~-L~d~s~d~l~fa~Ae~~pD~iv~i~~~~~~i~~fG~~TiE 198 (458) T protein:vir:10 122 IVQ-EIKAEGFYPASTVT-YQDGYFIFDRKGTGQFFISE-LLDVAFDPLDFATAEGQPDPLLAVLSDHREVFMFGQETIE 198 (458) T ss_pred EEE-eccCccccCcceEE-EeCcEEEEEeeCCCEEEEEe-cCcceeCcceeeeecCCCCceEEEEeeccEEEEEeccceE Confidence 111 12222222334555 446777543 3333 44443 222235 4444 23456999999999999999877766 Q ss_pred -EEEEcCCcccceeEeec---ccCCcccccceeecCceEEEecCCcEEEEcCCceeEeecccccchhHHhhhcCcccEEE Q lcl|Aclame:pro 337 -YLFSGVSPSTISGSKIP---SMQACLSRRSMVAMEGFVLYAGTNGLVSVDANGNVALATEQIVSPEQWQSQFNPASIVA 412 (567) Q Consensus 337 -y~lsG~~p~~m~~~~l~---~~~pcvs~~siv~~~~~v~y~s~dGlv~~~~~G~~~~vt~~~~~~~~W~~~l~P~ti~a 412 (567) |..+|..+ ..+++.+ .+-+|.++.|+..+++.++|+|+||.|-...+++++.|+--=++ ++|++ .+.++.+| T Consensus 199 vw~ntG~a~--fpy~r~~ga~i~~Gcaa~~sv~~~~~t~~~l~~d~~Vy~l~g~~~~rIST~aIE-~~i~s-y~~~da~a 274 (458) T protein:vir:10 199 VWYNSGAAD--FPFERNQGAFIEKGIGAPYSVAKTNNTVYFIGSDLMIYQITGYTPVRISTHAVE-QTLKG-VNLSDAFA 274 (458) T ss_pred EEEecCCCC--cceeecccceeeecccCcchhhhhCceEEEEcCCeEEEEecCceeEEeeCHHHH-HHHhc-CChhheEE Confidence 99999976 4555544 35599999999999999999999998887778888777666555 78886 79999888 Q ss_pred EEE--cCe--EEEEEecCCCcceeEEEccCCceeEEEee-----eeeEEEEEecCCeEEEEe--CCEEEEEcCC-----C Q lcl|Aclame:pro 413 YPW--RGE--YIACYTKPDGKQDVFVFSPVNMDIRYLST-----PFDCAWVDLAKDMMRVVT--GDKMSVLAGG-----A 476 (567) Q Consensus 413 ~~~--~G~--Y~~~y~~~~g~~~~~ifd~~~~~~~~~~~-----~~~a~~~~~~~d~ly~~~--g~~i~~~~~g-----~ 476 (567) ..| ||. |+..+- + ...-+.||...+. ++... ++-+..+-...+++.+.. ++.||+|+.. . T Consensus 275 ~t~~~eGH~fy~LtfP--~-a~~Tw~yD~~t~~-Wher~Sg~~~~~Ra~~~v~~~g~~~vGD~~ng~ly~ld~~~~td~g 350 (458) T protein:vir:10 275 YTYQSEGHLFYVLTIP--G-KNLTWCYDISSGS-WHVRQSYQFDRHVSNNSIYFDQKTLVGDFQNGRIYIMADNYYTDDG 350 (458) T ss_pred EEEEecCeEEEEEECC--C-CCceeEEeccccc-ceeeccCCCCceEEEEEEEeCCeEEEEEcCCCeEEEEcccCcCCCC Confidence 777 998 666542 1 1233677765432 22211 222333334467887764 5679999753 3 Q ss_pred CceeEEEEeeeEEcCC-CCceeEEEEe--------eCCcCceEEEE--EECCeeeEeec-CcccCCcc---------eEc Q lcl|Aclame:pro 477 LPSTIRWHSKIFSLPE-RTSFSCIRVK--------SPAPERVGITI--MADDVPVIHFA-PGTFKGSV---------VRL 535 (567) Q Consensus 477 ~~~~~~WrSK~f~~~~-~~~f~~~~V~--------~~~~~~~~~~i--~~d~~~~~~~~-~~~~~~~~---------~RL 535 (567) ++.+-+--++.|.-.. .+.+-.+.++ .++...-.+.+ =-||..-.... ......++ -|| T Consensus 351 ~~i~~~~~~p~~~~~~~rl~~~~~el~~~tGvg~~~~~~~~p~~~l~~S~d~g~~~s~~~~~~~lg~~gey~tr~~~~rl 430 (458) T protein:vir:10 351 DPVVREFILPVVNNGREFLTVDSLELDLSSGVGLTVGQGSDPELRVYFSKDNGNEYSQNFKVGKIGRKGEFLTRAKVNRF 430 (458) T ss_pred ceeeeeeeccceeCCCCeEEEEEEEEEEecceeeeeCCCCCceEEEEEeeCCCcccchhHHHhhcCCcchhhhhhhhhhh Confidence 4555555577775322 1111233332 12223344444 22332222211 11111111 133 Q ss_pred CCcccceEEEEEEecceEEEEEeecchhhhc Q lcl|Aclame:pro 536 PAATGQNWQVMVSGFGQVERITLSTSMSEMP 566 (567) Q Consensus 536 P~~~~~~wqiei~g~~~V~~i~la~s~~EL~ 566 (567) |++|++-+||+=..+|...-++-+++ |- T Consensus 431 --G~ar~rvf~v~~s~p~~~~l~ga~~~-~r 458 (458) T protein:vir:10 431 --GCARQFTFKVEISDPIPVDIGGAWVE-VR 458 (458) T ss_pred --ccCcceEEEEEEecchhhcceeeeEE-eC Confidence 34566667777667666555554443 22 No 17 >protein:vir:177 Length: 472 # NCBI annotation: DNA stabilization protein # Family: family:all:1540 # MgeID: mge:5 # MgeName: HK620 # Cross-refs: genbank:acc:NP_112082;genbank:gi:13559872;genbank:GeneID:920982 Probab=98.22 E-value=2.5e-06 Score=51.33 Aligned_cols=392 Identities=13% Similarity=0.123 Sum_probs=195.1 Q ss_pred cccccccccCCCCcccceeEecCCCCCCCCccccceeeEEEEEE-EecCCCccCCcccceeEEEecCCCEEEEccccCCC Q lcl|Aclame:pro 138 HPTSSYRLGIPAPTTAPVCTVQQGGDVSDDNPNDDETRFYTETF-VSDYGEEGPPGPASLEVTLRTPGTAVQLTLAPVPL 216 (567) Q Consensus 138 ~p~~~y~LgVpaP~~ap~~~v~~g~~~~g~~~~d~et~~Y~~Tf-Vt~~GeES~pS~~S~~v~v~~~g~~V~L~~~p~~~ 216 (567) .|. ++.|-......-...+. |.-.+ |+-+=+|+.-.-.+ ......||.+.- ..++-+. T Consensus 1 m~~------~~~Pl~~G~~~~~~~~d-------------~~~~~pVN~~a~~~~~~~s~-~~l~~tPGl~~~-a~v~G~~ 59 (472) T protein:vir:17 1 MPI------QQLPLMKGVGKDFRNAD-------------YIDYLPVNMLATPKEILNSS-GYLRSFPGIAKR-SDVNGVS 59 (472) T ss_pred CCe------eeeeeccCceeeccccc-------------hhheeeeeeeeeccCCCccc-ceeecCCCceee-ccCCccc Confidence 000 01110000000000000 11111 22222232222222 222345665332 2222111 Q ss_pred CC--CccceEEEEEEEcCCCCeeEE---EEEeccCcee-eEEeccCccc------c------Ccc-----cchhhccCCC Q lcl|Aclame:pro 217 QN--ASIKRRRIYRSASGGGEADFL---LVAELDASVL-SYTDKIPAKN------L------GPS-----LATWDYLPPP 273 (567) Q Consensus 217 ~~--~~it~~RIYRs~tggg~~e~~---lVael~~st~-sy~D~~~~~~------L------g~~-----L~t~~~~~Pp 273 (567) -| -++...-+||. . |++-|+ -|++++.+-. ++.|+...-. + +.+ .++....+.. T Consensus 60 RG~~~~~~~g~lY~V-~--G~~LY~v~~~iGsiag~grVsMa~n~~~~av~~~g~~~~Y~y~~~v~t~~~~~~d~~~~~~ 136 (472) T protein:vir:17 60 RGVEYNMAQNAVYRV-C--GGKLYKGESEVGDVAGSGRVSMAHGRTSQAVGVNGQLVEYRYDGTVKTVSNWPTDSGFTQY 136 (472) T ss_pred cceEEEeeCCeEEEE-e--cceEeeeecceecccCcccEEEecCCcEEEEEECCceeEEEeeccchhhhccccccccccc Confidence 12 11233444543 1 112222 1233332211 3444331110 0 011 1111122222 Q ss_pred CC--CceeeeecCcEEE-EEECCEEEEecCCCcccCchhh--c---eecccceEEEEEeCCeEEEEEcCcE--EEEEcCC Q lcl|Aclame:pro 274 EN--MTGLCLMANGIAA-GFAGNEVMFSEAYLPYAWPEVN--R---HTTAEDIVAICPLGTSLVVATKGEP--YLFSGVS 343 (567) Q Consensus 274 ~~--~~~l~~~~NG~l~-~a~Gn~l~FSEp~~Phawp~~y--~---~~~~~~Iv~i~pv~~gl~V~T~~~p--y~lsG~~ 343 (567) +- -+.+| .-.|++. .-.|..-||.-.+.+-..|.+| | ---|+.|++|...-+-||+.-+... |..+|.. T Consensus 137 dlg~~~dv~-f~dGyfV~~~~Gt~~~~is~l~d~~~~~~y~~fa~AE~~pD~Ivgi~~~~~~i~lfG~~TiEvw~ntG~a 215 (472) T protein:vir:17 137 ELGSVRDIT-RLRGRYAWSKDGTDSWFITDLEDESHPDRYSAQYRAESQPDGIIGIGTWRDFIVCFGSSTIEYFSLTGAT 215 (472) T ss_pred cccceeeee-eecceEEEeccCcceEEEeccCCccccccccccccccCCCCceEEEEeeccEEEEEeccceEEEEeeCCC Confidence 20 12344 3358855 4446767777666665556555 2 2345999999999999999877766 9999998 Q ss_pred c-ccceeEeec---ccCCcccccceeecCceEEEecCC----cEEEEcCCceeEeecccccchhHHhhhcC-ccc----E Q lcl|Aclame:pro 344 P-STISGSKIP---SMQACLSRRSMVAMEGFVLYAGTN----GLVSVDANGNVALATEQIVSPEQWQSQFN-PAS----I 410 (567) Q Consensus 344 p-~~m~~~~l~---~~~pcvs~~siv~~~~~v~y~s~d----Glv~~~~~G~~~~vt~~~~~~~~W~~~l~-P~t----i 410 (567) + ...-+++.+ .+-+|.++.|+..+++.++|+|++ |.|-...+++++.|+--=++ +.|++ .+ |+- + T Consensus 216 ~~~~fpy~r~~g~~iq~Gcaa~~sv~~~~~t~~~l~~d~~g~~~V~~~~g~~~~rIST~aIE-~~i~~-y~~~e~~dA~~ 293 (472) T protein:vir:17 216 TVGAALYVAQPSLMVQKGIAGTYCKTPFADSYAFISNPATGAPSVYIIGSGQVSPISSASIE-KILRS-YTADELADGVM 293 (472) T ss_pred CCCcCceeecCcceeeecccCcchhhecCceEEEEecCCccccEEEEccCceeEEecCHHHH-HHHHh-cCCccccceeE Confidence 7 345666665 566999999999999999999998 88888888888888555454 78876 65 664 3 Q ss_pred EEEEEcCe--EEEEEecCCCcceeEEEccCC--ceeEEEe-------eeeeEEEEEecCCeEEEEe--CCEEEEEcC--- Q lcl|Aclame:pro 411 VAYPWRGE--YIACYTKPDGKQDVFVFSPVN--MDIRYLS-------TPFDCAWVDLAKDMMRVVT--GDKMSVLAG--- 474 (567) Q Consensus 411 ~a~~~~G~--Y~~~y~~~~g~~~~~ifd~~~--~~~~~~~-------~~~~a~~~~~~~d~ly~~~--g~~i~~~~~--- 474 (567) ...+.||. |+..+- + .-+.||... +--++.. -++-+..+-...+++++.. ++.||+|+. T Consensus 294 ~t~~~~GH~fy~LtfP--~---~Tw~yD~~t~~Wherw~~~~~g~~~~~~Ra~~~~~~~g~~~vGD~~ng~ly~ld~~~~ 368 (472) T protein:vir:17 294 ESLRFDAHELLIIHLP--R---HVLVYDASSSANGPQWCVLKTGLYDDVYRAIDFIYEGNQITCGDKLESVTGKLQFDIS 368 (472) T ss_pred EEEEeCCeEEEEEEcC--C---ceeEeecccccCceeeeeecCCCccCceEEEEEEEeCCeEEEEEcCCCeEEEEcccCc Confidence 45567898 777663 2 356777643 2221111 0222333334467888764 568999975 Q ss_pred --CCCceeEEEEeeeEEcCCCCceeEEEEe-----eCCcCceEEEEEECCeeeEeec-------CcccCCcc--eEcCCc Q lcl|Aclame:pro 475 --GALPSTIRWHSKIFSLPERTSFSCIRVK-----SPAPERVGITIMADDVPVIHFA-------PGTFKGSV--VRLPAA 538 (567) Q Consensus 475 --g~~~~~~~WrSK~f~~~~~~~f~~~~V~-----~~~~~~~~~~i~~d~~~~~~~~-------~~~~~~~~--~RLP~~ 538 (567) +..|..-+--++.|..+..-=|- ..++ +..+.++-+.-..||.. ...+ .+..+.|. .||=.. T Consensus 369 td~g~pi~~~~~~p~~~~~~~RV~d-~el~~~tG~~~~adp~~l~~~sDg~~-~g~~~~~~~~~~g~~~~R~~~~RlG~~ 446 (472) T protein:vir:17 369 SQYDKQQEHLLFTPLFKADNARVFD-LEVESSTGVAQYADRLFLSATTDGIN-YGREQMIEQNEPFVYDKRVLWKRVGRI 446 (472) T ss_pred CCCCceeEEEEecceeeCCCceEEE-EEEeeeCCcccCCCceEEEcccCCcc-cchhhhhhhccCcccccceeeeeeeec Confidence 34666666777777775542221 2222 11233444444666321 1111 12222221 244444 Q ss_pred ccce-EEEEEEecceEEEEEeecchhhhc Q lcl|Aclame:pro 539 TGQN-WQVMVSGFGQVERITLSTSMSEMP 566 (567) Q Consensus 539 ~~~~-wqiei~g~~~V~~i~la~s~~EL~ 566 (567) |.+. .+|+++...+|. |..-.-++- T Consensus 447 r~~v~f~~~~~~~~~~~---l~~a~~~~e 472 (472) T protein:vir:17 447 RKNVGFKLRVITKSPVT---LSGCQIRIE 472 (472) T ss_pred cccceEEEEEeecccce---eeeeEEEeC Confidence 4444 777777777765 222222222 No 18 >protein:vir:107802 Length: 681 # NCBI annotation: hypothetical protein predicted by GeneMark # Family: family:all:780 # MgeID: mge:1673 # MgeName: BIP-1 # Cross-refs: genbank:acc:NP_996623;genbank:gi:45580757;genbank:GeneID:2767878 Probab=98.10 E-value=4.6e-06 Score=49.82 Aligned_cols=498 Identities=14% Similarity=0.144 Sum_probs=222.0 Q ss_pred eeEEEe--cccc-cccCccchhcCc-------ccccceEEeeee-cCCeEeEeeccccccccccccce-EEEEE------ Q lcl|Aclame:pro 27 MPYIDI--TTMR-GMMPRVVTSMLP-------EHSAVLAEDCHF-RFGVITPERQISGVEKTFTIKPK-TIFHY------ 88 (567) Q Consensus 27 M~~I~i--~~f~-G~~pr~~p~lL~-------~~~a~~A~N~~~-~~G~l~P~~~~~~v~~~~~~~~~-Tif~~------ 88 (567) |+-|.+ ..|. || |.|+|.- .+.+..+.|+-. -.|.++-+.+-..++.......+ -|+.| T Consensus 1 m~~~~~~~~~f~~Ge---~~p~l~~r~D~~~y~~~~~~~~N~~~~~~G~~~~R~g~~~~~~~~~~~~~~rlipf~~~~~~ 77 (681) T protein:vir:10 1 MSNVRVLQRSFGGGE---ISPEMFGRIDDVKYQSGLAICRNFVVKPQGPAENRAGFAFVREVKDSAKKVRLIPFTYSVTQ 77 (681) T ss_pred CcceeEeeeecCCce---eeeeeccchhHHHHHHHHHHhcCcEEEecCCceecChhHhhhhcCCCCCcEEEEEEEeCCCc Confidence 765444 4564 55 6666654 567788999887 78888877776666543322211 23322 Q ss_pred ------CCceEEeeCCeEEE--------eeCCCCCCC---------cceEEEcCCCeeeeeeccccccCCcccccccccc Q lcl|Aclame:pro 89 ------RDDFWFAWPDVVDV--------IRSPIAQDP---------HGRIYYTDGRFPKVTDATIATKGDGNHPTSSYRL 145 (567) Q Consensus 89 ------~~~~w~~w~~~V~~--------~~spia~D~---------~~Rvy~tgd~~p~~t~~~iat~g~g~~p~~~y~L 145 (567) .+.+--.|.+...+ +..|-..+. ...+|++--.+|+..-.- .++..--.+.+.+ T Consensus 78 ~~~l~~g~~~~r~~~~~~~~~~~~~~~~~~tpy~~~~l~~l~~~q~aD~~~i~h~~~~p~~L~r---~~~~~W~l~~~~f 154 (681) T protein:vir:10 78 TMVIELGAGYFRFHTNGGTLLDGAVPYEIANPYAEADLFNIHYVQSADVLTLVHPNYAPRELRR---LGATNWQLATIAF 154 (681) T ss_pred eEEEEEeCCeEEEEeCCcEEeeCcEeEEecCCCChhhhcCceEEEEcCEEEEECCCCcceEEEE---ccCCceEEEEEEe Confidence 22233334432211 345532211 126777765555443211 1222111111111 Q ss_pred cCCCCcccceeEecCCCCCCCCccccceeeEEEEEEEecCCC-ccCCcccceeEEEe--cCCCEEEEccccCCCCCCccc Q lcl|Aclame:pro 146 GIPAPTTAPVCTVQQGGDVSDDNPNDDETRFYTETFVSDYGE-EGPPGPASLEVTLR--TPGTAVQLTLAPVPLQNASIK 222 (567) Q Consensus 146 gVpaP~~ap~~~v~~g~~~~g~~~~d~et~~Y~~TfVt~~Ge-ES~pS~~S~~v~v~--~~g~~V~L~~~p~~~~~~~it 222 (567) . +.|..+...+... .. .+..-+..|.++-+++.+. |+.++.. ..++.. ..+...++..-. .. .-. T Consensus 155 ~-~~p~~p~~~~at~--~~----~~~~~t~~~~v~avda~t~~~s~~~~~-~tvt~~~~~~~~~~t~~w~a--~~--g~~ 222 (681) T protein:vir:10 155 T-SPVATPTSVTATS--NN----KGTDYTYRYVVTALDAEGKTESAPSSA-GTCTNNLFTNGGANTIAWSA--SS--GAS 222 (681) T ss_pred c-cccccceeeeeec--cC----CccceeEeEEEEEeecccceeecCCcc-eEEeeeeecCCcceeEEEEe--cC--Cce Confidence 1 1121111122211 11 1222356676777777764 6666542 222221 122223332211 11 123 Q ss_pred eEEEEEEEcCCCCeeEEEEEeccCceeeEEeccCccccCcccchhhccCCCCC----CceeeeecCcEEEEE----ECCE Q lcl|Aclame:pro 223 RRRIYRSASGGGEADFLLVAELDASVLSYTDKIPAKNLGPSLATWDYLPPPEN----MTGLCLMANGIAAGF----AGNE 294 (567) Q Consensus 223 ~~RIYRs~tggg~~e~~lVael~~st~sy~D~~~~~~Lg~~L~t~~~~~Pp~~----~~~l~~~~NG~l~~a----~Gn~ 294 (567) ..|||+-.. .-+-++.. ....++.++....... .+..|...|-+ --..+.++++||.-+ ..+. T Consensus 223 ~~~V~~~~~----gi~g~ig~--~~~~~~~~~~~~~~~~---~t~~~~~~~~~~~~gyP~~v~f~q~RL~f~~~~~~p~~ 293 (681) T protein:vir:10 223 RYNVYKEQG----GLYGYIGQ--TTGTSLVDDNIAPDLS---VTPPIYDAVFNAAGDYPAAVSYFEQRRCFAGTTNKPQN 293 (681) T ss_pred eeeecccce----eEEEEeec--cceeeeeecccccCcc---ccccccccccccCCCceEEEEEEcceEEEeeCCCCCcE Confidence 456665211 12222221 1223444433221111 11122222211 112345788888776 4578 Q ss_pred EEEecCCCcccC-chh-----h--ceecc----cceEEEEEeCCeEEEEEcCcEEEEEcC-----CcccceeEeecccCC Q lcl|Aclame:pro 295 VMFSEAYLPYAW-PEV-----N--RHTTA----EDIVAICPLGTSLVVATKGEPYLFSGV-----SPSTISGSKIPSMQA 357 (567) Q Consensus 295 l~FSEp~~Phaw-p~~-----y--~~~~~----~~Iv~i~pv~~gl~V~T~~~py~lsG~-----~p~~m~~~~l~~~~p 357 (567) ||+|.+-.++-| |.. . -+++. ..|.-+.+++ .|+|+|.+.-|+|+|. +|.+..+.+. .... T Consensus 294 v~~Srsgdy~nF~~~~~~~ddD~i~~~~~~~~~~~i~~~v~~~-~lli~t~~~e~~l~~~~~~~lTP~~~~~~~~-s~~g 371 (681) T protein:vir:10 294 IWMTRSGTESAMSYSLPVRDDDRVAFRVAAREANAIRHIVPLT-ELLLLTSSGEWRVASVNSDAVTPTTISVRPQ-SYVG 371 (681) T ss_pred EEEEcccCcccccccCCCCCCccEEEEEcCCcceeEEEEEecC-cEEEEEcCcEEEEecCCCccccceeEEEEEe-eeec Confidence 999999998887 322 1 12222 3488889985 5999999999999983 5666555443 4456 Q ss_pred cccccceeecCceEEEecCCc-----EEEEcCCce--eEeec---ccccchhHHhhhcCcccEEEEEEcCeEEEEEecCC Q lcl|Aclame:pro 358 CLSRRSMVAMEGFVLYAGTNG-----LVSVDANGN--VALAT---EQIVSPEQWQSQFNPASIVAYPWRGEYIACYTKPD 427 (567) Q Consensus 358 cvs~~siv~~~~~v~y~s~dG-----lv~~~~~G~--~~~vt---~~~~~~~~W~~~l~P~ti~a~~~~G~Y~~~y~~~~ 427 (567) |- .-..+..++.++|++++| |..-...++ +.-+| +.++.- . .-.-.|++-+..-+.++...+ T Consensus 372 ~~-~~~Pv~vg~~v~fv~~~g~~vre~~y~~~~d~~~~~dlt~~a~Hl~~~------~-~i~~~a~~~~p~~~~~~v~~d 443 (681) T protein:vir:10 372 AT-DVQPVVVNNTTIYGAARGGHVRELAYNWQANGFVTGDLSLRAAHLFDN------L-DILDMAYAKAPQPIVWFISSS 443 (681) T ss_pred cc-cccceeeCCeEEEEecCCCEEEEEEEeeecCceeccchhhhhhhhcCC------C-CeEEEEEecCCCEEEEEEecC Confidence 74 345788899999999999 222222221 11222 222210 0 111134444555555566667 Q ss_pred CcceeEEEccCCceeEEEeeeeeEEE------EEecCCeEEEEe-----CC-EEEEEcCCCCceeEEEEeeeEEcCCCCc Q lcl|Aclame:pro 428 GKQDVFVFSPVNMDIRYLSTPFDCAW------VDLAKDMMRVVT-----GD-KMSVLAGGALPSTIRWHSKIFSLPERTS 495 (567) Q Consensus 428 g~~~~~ifd~~~~~~~~~~~~~~a~~------~~~~~d~ly~~~-----g~-~i~~~~~g~~~~~~~WrSK~f~~~~~~~ 495 (567) |+--++.|+...+-.-++...++-.+ .+-..|.||++. |. ..|.=.-+ . ....++..-|.+...++ T Consensus 444 g~l~~~ty~~eq~v~aW~~~~~~g~v~~v~~i~~~~~d~l~~vv~r~~~g~~~~yie~~~-~-~~~~~~~~~~~vD~~~t 521 (681) T protein:vir:10 444 GKLLGLTYVPEQQIGAWHQHDTDGVFESCAVVAEGNEDRLYAVVRRTIGGNEVRYVERMA-S-RQFDAQADAFFVDSGLT 521 (681) T ss_pred CcEEEEEEecccceeeEEEEecCCcEEEEEEecCCCCcEEEEEEEecCCCCeEEEEEecC-C-ccccccccceEeecccc Confidence 77677777765443344444444222 233468899874 22 12211001 0 11223333344433333 Q ss_pred eeEE---EEee-CCcCceEEEEEECCeeeEeecCcccCCcceEcCCcc-----cceEEEEEE---------------ecc Q lcl|Aclame:pro 496 FSCI---RVKS-PAPERVGITIMADDVPVIHFAPGTFKGSVVRLPAAT-----GQNWQVMVS---------------GFG 551 (567) Q Consensus 496 f~~~---~V~~-~~~~~~~~~i~~d~~~~~~~~~~~~~~~~~RLP~~~-----~~~wqiei~---------------g~~ 551 (567) +..- .+.+ +-.+.-.+.|++||... ......+..+.|+.-- +....-+++ ... T Consensus 522 ~~~~~~~~~sgl~~leG~tv~i~aDG~~~---~~~~V~~G~itl~~~~~~v~VGl~Y~s~i~~lp~~~~~~~g~~~g~~~ 598 (681) T protein:vir:10 522 YSGEPVSHISGLEHLEGKTVSILADGAVH---PQRVVTDGAIDLDVEAGTVHIGLPITAELQTLPVAMQLDGSFGQGRVK 598 (681) T ss_pred ccCcceeeeccccCCCCcEEEEEeCCeec---CcEeecCcEEEeCcCCceEEEeeeceeEEEecceeeecCCcccCCceE Confidence 3211 1111 11233456677887643 2222222233333210 111111111 012 Q ss_pred eEEEEEee--cchhhhcC Q lcl|Aclame:pro 552 QVERITLS--TSMSEMPV 567 (567) Q Consensus 552 ~V~~i~la--~s~~EL~~ 567 (567) +|.+++|- .|.. +-+ T Consensus 599 ri~rv~lr~~~S~g-~~~ 615 (681) T protein:vir:10 599 NINKLWLRVHRSSG-IFA 615 (681) T ss_pred EEEEEEEEEEcccc-eEE Confidence 22222211 1110 000 No 19 >protein:vir:107423 Length: 681 # NCBI annotation: Bbp13 # Family: family:all:780 # MgeID: mge:1537 # MgeName: BPP-1 # Cross-refs: genbank:acc:NP_958682;genbank:gi:41179374;genbank:GeneID:2717217 Probab=98.10 E-value=4.6e-06 Score=49.82 Aligned_cols=498 Identities=14% Similarity=0.144 Sum_probs=222.0 Q ss_pred eeEEEe--cccc-cccCccchhcCc-------ccccceEEeeee-cCCeEeEeeccccccccccccce-EEEEE------ Q lcl|Aclame:pro 27 MPYIDI--TTMR-GMMPRVVTSMLP-------EHSAVLAEDCHF-RFGVITPERQISGVEKTFTIKPK-TIFHY------ 88 (567) Q Consensus 27 M~~I~i--~~f~-G~~pr~~p~lL~-------~~~a~~A~N~~~-~~G~l~P~~~~~~v~~~~~~~~~-Tif~~------ 88 (567) |+-|.+ ..|. || |.|+|.- .+.+..+.|+-. -.|.++-+.+-..++.......+ -|+.| T Consensus 1 m~~~~~~~~~f~~Ge---~~p~l~~r~D~~~y~~~~~~~~N~~~~~~G~~~~R~g~~~~~~~~~~~~~~rlipf~~~~~~ 77 (681) T protein:vir:10 1 MSNVRVLQRSFGGGE---ISPEMFGRIDDVKYQSGLAICRNFVVKPQGPAENRAGFAFVREVKDSAKKVRLIPFTYSVTQ 77 (681) T ss_pred CcceeEeeeecCCce---eeeeeccchhHHHHHHHHHHhcCcEEEecCCceecChhHhhhhcCCCCCcEEEEEEEeCCCc Confidence 765444 4564 55 6666654 567788999887 78888877776666543322211 23322 Q ss_pred ------CCceEEeeCCeEEE--------eeCCCCCCC---------cceEEEcCCCeeeeeeccccccCCcccccccccc Q lcl|Aclame:pro 89 ------RDDFWFAWPDVVDV--------IRSPIAQDP---------HGRIYYTDGRFPKVTDATIATKGDGNHPTSSYRL 145 (567) Q Consensus 89 ------~~~~w~~w~~~V~~--------~~spia~D~---------~~Rvy~tgd~~p~~t~~~iat~g~g~~p~~~y~L 145 (567) .+.+--.|.+...+ +..|-..+. ...+|++--.+|+..-.- .++..--.+.+.+ T Consensus 78 ~~~l~~g~~~~r~~~~~~~~~~~~~~~~~~tpy~~~~l~~l~~~q~aD~~~i~h~~~~p~~L~r---~~~~~W~l~~~~f 154 (681) T protein:vir:10 78 TMVIELGAGYFRFHTNGGTLLDGAVPYEIANPYAEADLFNIHYVQSADVLTLVHPNYAPRELRR---LGATNWQLATIAF 154 (681) T ss_pred eEEEEEeCCeEEEEeCCcEEeeCcEeEEecCCCChhhhcCceEEEEcCEEEEECCCCcceEEEE---ccCCceEEEEEEe Confidence 22233334432211 345532211 126777765555443211 1222111111111 Q ss_pred cCCCCcccceeEecCCCCCCCCccccceeeEEEEEEEecCCC-ccCCcccceeEEEe--cCCCEEEEccccCCCCCCccc Q lcl|Aclame:pro 146 GIPAPTTAPVCTVQQGGDVSDDNPNDDETRFYTETFVSDYGE-EGPPGPASLEVTLR--TPGTAVQLTLAPVPLQNASIK 222 (567) Q Consensus 146 gVpaP~~ap~~~v~~g~~~~g~~~~d~et~~Y~~TfVt~~Ge-ES~pS~~S~~v~v~--~~g~~V~L~~~p~~~~~~~it 222 (567) . +.|..+...+... .. .+..-+..|.++-+++.+. |+.++.. ..++.. ..+...++..-. .. .-. T Consensus 155 ~-~~p~~p~~~~at~--~~----~~~~~t~~~~v~avda~t~~~s~~~~~-~tvt~~~~~~~~~~t~~w~a--~~--g~~ 222 (681) T protein:vir:10 155 T-SPVATPTSVTATS--NN----KGTDYTYRYVVTALDAEGKTESAPSSA-GTCTNNLFTNGGANTIAWSA--SS--GAS 222 (681) T ss_pred c-cccccceeeeeec--cC----CccceeEeEEEEEeecccceeecCCcc-eEEeeeeecCCcceeEEEEe--cC--Cce Confidence 1 1121111122211 11 1222356676777777764 6666542 222221 122223332211 11 123 Q ss_pred eEEEEEEEcCCCCeeEEEEEeccCceeeEEeccCccccCcccchhhccCCCCC----CceeeeecCcEEEEE----ECCE Q lcl|Aclame:pro 223 RRRIYRSASGGGEADFLLVAELDASVLSYTDKIPAKNLGPSLATWDYLPPPEN----MTGLCLMANGIAAGF----AGNE 294 (567) Q Consensus 223 ~~RIYRs~tggg~~e~~lVael~~st~sy~D~~~~~~Lg~~L~t~~~~~Pp~~----~~~l~~~~NG~l~~a----~Gn~ 294 (567) ..|||+-.. .-+-++.. ....++.++....... .+..|...|-+ --..+.++++||.-+ ..+. T Consensus 223 ~~~V~~~~~----gi~g~ig~--~~~~~~~~~~~~~~~~---~t~~~~~~~~~~~~gyP~~v~f~q~RL~f~~~~~~p~~ 293 (681) T protein:vir:10 223 RYNVYKEQG----GLYGYIGQ--TTGTSLVDDNIAPDLS---VTPPIYDAVFNAAGDYPAAVSYFEQRRCFAGTTNKPQN 293 (681) T ss_pred eeeecccce----eEEEEeec--cceeeeeecccccCcc---ccccccccccccCCCceEEEEEEcceEEEeeCCCCCcE Confidence 456665211 12222221 1223444433221111 11122222211 112345788888776 4578 Q ss_pred EEEecCCCcccC-chh-----h--ceecc----cceEEEEEeCCeEEEEEcCcEEEEEcC-----CcccceeEeecccCC Q lcl|Aclame:pro 295 VMFSEAYLPYAW-PEV-----N--RHTTA----EDIVAICPLGTSLVVATKGEPYLFSGV-----SPSTISGSKIPSMQA 357 (567) Q Consensus 295 l~FSEp~~Phaw-p~~-----y--~~~~~----~~Iv~i~pv~~gl~V~T~~~py~lsG~-----~p~~m~~~~l~~~~p 357 (567) ||+|.+-.++-| |.. . -+++. ..|.-+.+++ .|+|+|.+.-|+|+|. +|.+..+.+. .... T Consensus 294 v~~Srsgdy~nF~~~~~~~ddD~i~~~~~~~~~~~i~~~v~~~-~lli~t~~~e~~l~~~~~~~lTP~~~~~~~~-s~~g 371 (681) T protein:vir:10 294 IWMTRSGTESAMSYSLPVRDDDRVAFRVAAREANAIRHIVPLT-ELLLLTSSGEWRVASVNSDAVTPTTISVRPQ-SYVG 371 (681) T ss_pred EEEEcccCcccccccCCCCCCccEEEEEcCCcceeEEEEEecC-cEEEEEcCcEEEEecCCCccccceeEEEEEe-eeec Confidence 999999998887 322 1 12222 3488889985 5999999999999983 5666555443 4456 Q ss_pred cccccceeecCceEEEecCCc-----EEEEcCCce--eEeec---ccccchhHHhhhcCcccEEEEEEcCeEEEEEecCC Q lcl|Aclame:pro 358 CLSRRSMVAMEGFVLYAGTNG-----LVSVDANGN--VALAT---EQIVSPEQWQSQFNPASIVAYPWRGEYIACYTKPD 427 (567) Q Consensus 358 cvs~~siv~~~~~v~y~s~dG-----lv~~~~~G~--~~~vt---~~~~~~~~W~~~l~P~ti~a~~~~G~Y~~~y~~~~ 427 (567) |- .-..+..++.++|++++| |..-...++ +.-+| +.++.- . .-.-.|++-+..-+.++...+ T Consensus 372 ~~-~~~Pv~vg~~v~fv~~~g~~vre~~y~~~~d~~~~~dlt~~a~Hl~~~------~-~i~~~a~~~~p~~~~~~v~~d 443 (681) T protein:vir:10 372 AT-DVQPVVVNNTTIYGAARGGHVRELAYNWQANGFVTGDLSLRAAHLFDN------L-DILDMAYAKAPQPIVWFISSS 443 (681) T ss_pred cc-cccceeeCCeEEEEecCCCEEEEEEEeeecCceeccchhhhhhhhcCC------C-CeEEEEEecCCCEEEEEEecC Confidence 74 345788899999999999 222222221 11222 222210 0 111134444555555566667 Q ss_pred CcceeEEEccCCceeEEEeeeeeEEE------EEecCCeEEEEe-----CC-EEEEEcCCCCceeEEEEeeeEEcCCCCc Q lcl|Aclame:pro 428 GKQDVFVFSPVNMDIRYLSTPFDCAW------VDLAKDMMRVVT-----GD-KMSVLAGGALPSTIRWHSKIFSLPERTS 495 (567) Q Consensus 428 g~~~~~ifd~~~~~~~~~~~~~~a~~------~~~~~d~ly~~~-----g~-~i~~~~~g~~~~~~~WrSK~f~~~~~~~ 495 (567) |+--++.|+...+-.-++...++-.+ .+-..|.||++. |. ..|.=.-+ . ....++..-|.+...++ T Consensus 444 g~l~~~ty~~eq~v~aW~~~~~~g~v~~v~~i~~~~~d~l~~vv~r~~~g~~~~yie~~~-~-~~~~~~~~~~~vD~~~t 521 (681) T protein:vir:10 444 GKLLGLTYVPEQQIGAWHQHDTDGVFESCAVVAEGNEDRLYAVVRRTIGGNEVRYVERMA-S-RQFDAQADAFFVDSGLT 521 (681) T ss_pred CcEEEEEEecccceeeEEEEecCCcEEEEEEecCCCCcEEEEEEEecCCCCeEEEEEecC-C-ccccccccceEeecccc Confidence 77677777765443344444444222 233468899874 22 12211001 0 11223333344433333 Q ss_pred eeEE---EEee-CCcCceEEEEEECCeeeEeecCcccCCcceEcCCcc-----cceEEEEEE---------------ecc Q lcl|Aclame:pro 496 FSCI---RVKS-PAPERVGITIMADDVPVIHFAPGTFKGSVVRLPAAT-----GQNWQVMVS---------------GFG 551 (567) Q Consensus 496 f~~~---~V~~-~~~~~~~~~i~~d~~~~~~~~~~~~~~~~~RLP~~~-----~~~wqiei~---------------g~~ 551 (567) +..- .+.+ +-.+.-.+.|++||... ......+..+.|+.-- +....-+++ ... T Consensus 522 ~~~~~~~~~sgl~~leG~tv~i~aDG~~~---~~~~V~~G~itl~~~~~~v~VGl~Y~s~i~~lp~~~~~~~g~~~g~~~ 598 (681) T protein:vir:10 522 YSGEPVSHISGLEHLEGKTVSILADGAVH---PQRVVTDGAIDLDVEAGTVHIGLPITAELQTLPVAMQLDGSFGQGRVK 598 (681) T ss_pred ccCcceeeeccccCCCCcEEEEEeCCeec---CcEeecCcEEEeCcCCceEEEeeeceeEEEecceeeecCCcccCCceE Confidence 3211 1111 11233456677887643 2222222233333210 111111111 012 Q ss_pred eEEEEEee--cchhhhcC Q lcl|Aclame:pro 552 QVERITLS--TSMSEMPV 567 (567) Q Consensus 552 ~V~~i~la--~s~~EL~~ 567 (567) +|.+++|- .|.. +-+ T Consensus 599 ri~rv~lr~~~S~g-~~~ 615 (681) T protein:vir:10 599 NINKLWLRVHRSSG-IFA 615 (681) T ss_pred EEEEEEEEEEcccc-eEE Confidence 22222211 1110 000 No 20 >protein:vir:98487 Length: 681 # NCBI annotation: hypothetical protein predicted by GeneMark # Family: family:all:780 # MgeID: mge:1592 # MgeName: BMP-1 # Cross-refs: genbank:acc:NP_996575;genbank:gi:45569506;genbank:GeneID:2767815 Probab=98.10 E-value=4.6e-06 Score=49.82 Aligned_cols=498 Identities=14% Similarity=0.144 Sum_probs=222.0 Q ss_pred eeEEEe--cccc-cccCccchhcCc-------ccccceEEeeee-cCCeEeEeeccccccccccccce-EEEEE------ Q lcl|Aclame:pro 27 MPYIDI--TTMR-GMMPRVVTSMLP-------EHSAVLAEDCHF-RFGVITPERQISGVEKTFTIKPK-TIFHY------ 88 (567) Q Consensus 27 M~~I~i--~~f~-G~~pr~~p~lL~-------~~~a~~A~N~~~-~~G~l~P~~~~~~v~~~~~~~~~-Tif~~------ 88 (567) |+-|.+ ..|. || |.|+|.- .+.+..+.|+-. -.|.++-+.+-..++.......+ -|+.| T Consensus 1 m~~~~~~~~~f~~Ge---~~p~l~~r~D~~~y~~~~~~~~N~~~~~~G~~~~R~g~~~~~~~~~~~~~~rlipf~~~~~~ 77 (681) T protein:vir:98 1 MSNVRVLQRSFGGGE---ISPEMFGRIDDVKYQSGLAICRNFVVKPQGPAENRAGFAFVREVKDSAKKVRLIPFTYSVTQ 77 (681) T ss_pred CcceeEeeeecCCce---eeeeeccchhHHHHHHHHHHhcCcEEEecCCceecChhHhhhhcCCCCCcEEEEEEEeCCCc Confidence 765444 4564 55 6666654 567788999887 78888877776666543322211 23322 Q ss_pred ------CCceEEeeCCeEEE--------eeCCCCCCC---------cceEEEcCCCeeeeeeccccccCCcccccccccc Q lcl|Aclame:pro 89 ------RDDFWFAWPDVVDV--------IRSPIAQDP---------HGRIYYTDGRFPKVTDATIATKGDGNHPTSSYRL 145 (567) Q Consensus 89 ------~~~~w~~w~~~V~~--------~~spia~D~---------~~Rvy~tgd~~p~~t~~~iat~g~g~~p~~~y~L 145 (567) .+.+--.|.+...+ +..|-..+. ...+|++--.+|+..-.- .++..--.+.+.+ T Consensus 78 ~~~l~~g~~~~r~~~~~~~~~~~~~~~~~~tpy~~~~l~~l~~~q~aD~~~i~h~~~~p~~L~r---~~~~~W~l~~~~f 154 (681) T protein:vir:98 78 TMVIELGAGYFRFHTNGGTLLDGAVPYEIANPYAEADLFNIHYVQSADVLTLVHPNYAPRELRR---LGATNWQLATIAF 154 (681) T ss_pred eEEEEEeCCeEEEEeCCcEEeeCcEeEEecCCCChhhhcCceEEEEcCEEEEECCCCcceEEEE---ccCCceEEEEEEe Confidence 22233334432211 345532211 126777765555443211 1222111111111 Q ss_pred cCCCCcccceeEecCCCCCCCCccccceeeEEEEEEEecCCC-ccCCcccceeEEEe--cCCCEEEEccccCCCCCCccc Q lcl|Aclame:pro 146 GIPAPTTAPVCTVQQGGDVSDDNPNDDETRFYTETFVSDYGE-EGPPGPASLEVTLR--TPGTAVQLTLAPVPLQNASIK 222 (567) Q Consensus 146 gVpaP~~ap~~~v~~g~~~~g~~~~d~et~~Y~~TfVt~~Ge-ES~pS~~S~~v~v~--~~g~~V~L~~~p~~~~~~~it 222 (567) . +.|..+...+... .. .+..-+..|.++-+++.+. |+.++.. ..++.. ..+...++..-. .. .-. T Consensus 155 ~-~~p~~p~~~~at~--~~----~~~~~t~~~~v~avda~t~~~s~~~~~-~tvt~~~~~~~~~~t~~w~a--~~--g~~ 222 (681) T protein:vir:98 155 T-SPVATPTSVTATS--NN----KGTDYTYRYVVTALDAEGKTESAPSSA-GTCTNNLFTNGGANTIAWSA--SS--GAS 222 (681) T ss_pred c-cccccceeeeeec--cC----CccceeEeEEEEEeecccceeecCCcc-eEEeeeeecCCcceeEEEEe--cC--Cce Confidence 1 1121111122211 11 1222356676777777764 6666542 222221 122223332211 11 123 Q ss_pred eEEEEEEEcCCCCeeEEEEEeccCceeeEEeccCccccCcccchhhccCCCCC----CceeeeecCcEEEEE----ECCE Q lcl|Aclame:pro 223 RRRIYRSASGGGEADFLLVAELDASVLSYTDKIPAKNLGPSLATWDYLPPPEN----MTGLCLMANGIAAGF----AGNE 294 (567) Q Consensus 223 ~~RIYRs~tggg~~e~~lVael~~st~sy~D~~~~~~Lg~~L~t~~~~~Pp~~----~~~l~~~~NG~l~~a----~Gn~ 294 (567) ..|||+-.. .-+-++.. ....++.++....... .+..|...|-+ --..+.++++||.-+ ..+. T Consensus 223 ~~~V~~~~~----gi~g~ig~--~~~~~~~~~~~~~~~~---~t~~~~~~~~~~~~gyP~~v~f~q~RL~f~~~~~~p~~ 293 (681) T protein:vir:98 223 RYNVYKEQG----GLYGYIGQ--TTGTSLVDDNIAPDLS---VTPPIYDAVFNAAGDYPAAVSYFEQRRCFAGTTNKPQN 293 (681) T ss_pred eeeecccce----eEEEEeec--cceeeeeecccccCcc---ccccccccccccCCCceEEEEEEcceEEEeeCCCCCcE Confidence 456665211 12222221 1223444433221111 11122222211 112345788888776 4578 Q ss_pred EEEecCCCcccC-chh-----h--ceecc----cceEEEEEeCCeEEEEEcCcEEEEEcC-----CcccceeEeecccCC Q lcl|Aclame:pro 295 VMFSEAYLPYAW-PEV-----N--RHTTA----EDIVAICPLGTSLVVATKGEPYLFSGV-----SPSTISGSKIPSMQA 357 (567) Q Consensus 295 l~FSEp~~Phaw-p~~-----y--~~~~~----~~Iv~i~pv~~gl~V~T~~~py~lsG~-----~p~~m~~~~l~~~~p 357 (567) ||+|.+-.++-| |.. . -+++. ..|.-+.+++ .|+|+|.+.-|+|+|. +|.+..+.+. .... T Consensus 294 v~~Srsgdy~nF~~~~~~~ddD~i~~~~~~~~~~~i~~~v~~~-~lli~t~~~e~~l~~~~~~~lTP~~~~~~~~-s~~g 371 (681) T protein:vir:98 294 IWMTRSGTESAMSYSLPVRDDDRVAFRVAAREANAIRHIVPLT-ELLLLTSSGEWRVASVNSDAVTPTTISVRPQ-SYVG 371 (681) T ss_pred EEEEcccCcccccccCCCCCCccEEEEEcCCcceeEEEEEecC-cEEEEEcCcEEEEecCCCccccceeEEEEEe-eeec Confidence 999999998887 322 1 12222 3488889985 5999999999999983 5666555443 4456 Q ss_pred cccccceeecCceEEEecCCc-----EEEEcCCce--eEeec---ccccchhHHhhhcCcccEEEEEEcCeEEEEEecCC Q lcl|Aclame:pro 358 CLSRRSMVAMEGFVLYAGTNG-----LVSVDANGN--VALAT---EQIVSPEQWQSQFNPASIVAYPWRGEYIACYTKPD 427 (567) Q Consensus 358 cvs~~siv~~~~~v~y~s~dG-----lv~~~~~G~--~~~vt---~~~~~~~~W~~~l~P~ti~a~~~~G~Y~~~y~~~~ 427 (567) |- .-..+..++.++|++++| |..-...++ +.-+| +.++.- . .-.-.|++-+..-+.++...+ T Consensus 372 ~~-~~~Pv~vg~~v~fv~~~g~~vre~~y~~~~d~~~~~dlt~~a~Hl~~~------~-~i~~~a~~~~p~~~~~~v~~d 443 (681) T protein:vir:98 372 AT-DVQPVVVNNTTIYGAARGGHVRELAYNWQANGFVTGDLSLRAAHLFDN------L-DILDMAYAKAPQPIVWFISSS 443 (681) T ss_pred cc-cccceeeCCeEEEEecCCCEEEEEEEeeecCceeccchhhhhhhhcCC------C-CeEEEEEecCCCEEEEEEecC Confidence 74 345788899999999999 222222221 11222 222210 0 111134444555555566667 Q ss_pred CcceeEEEccCCceeEEEeeeeeEEE------EEecCCeEEEEe-----CC-EEEEEcCCCCceeEEEEeeeEEcCCCCc Q lcl|Aclame:pro 428 GKQDVFVFSPVNMDIRYLSTPFDCAW------VDLAKDMMRVVT-----GD-KMSVLAGGALPSTIRWHSKIFSLPERTS 495 (567) Q Consensus 428 g~~~~~ifd~~~~~~~~~~~~~~a~~------~~~~~d~ly~~~-----g~-~i~~~~~g~~~~~~~WrSK~f~~~~~~~ 495 (567) |+--++.|+...+-.-++...++-.+ .+-..|.||++. |. ..|.=.-+ . ....++..-|.+...++ T Consensus 444 g~l~~~ty~~eq~v~aW~~~~~~g~v~~v~~i~~~~~d~l~~vv~r~~~g~~~~yie~~~-~-~~~~~~~~~~~vD~~~t 521 (681) T protein:vir:98 444 GKLLGLTYVPEQQIGAWHQHDTDGVFESCAVVAEGNEDRLYAVVRRTIGGNEVRYVERMA-S-RQFDAQADAFFVDSGLT 521 (681) T ss_pred CcEEEEEEecccceeeEEEEecCCcEEEEEEecCCCCcEEEEEEEecCCCCeEEEEEecC-C-ccccccccceEeecccc Confidence 77677777765443344444444222 233468899874 22 12211001 0 11223333344433333 Q ss_pred eeEE---EEee-CCcCceEEEEEECCeeeEeecCcccCCcceEcCCcc-----cceEEEEEE---------------ecc Q lcl|Aclame:pro 496 FSCI---RVKS-PAPERVGITIMADDVPVIHFAPGTFKGSVVRLPAAT-----GQNWQVMVS---------------GFG 551 (567) Q Consensus 496 f~~~---~V~~-~~~~~~~~~i~~d~~~~~~~~~~~~~~~~~RLP~~~-----~~~wqiei~---------------g~~ 551 (567) +..- .+.+ +-.+.-.+.|++||... ......+..+.|+.-- +....-+++ ... T Consensus 522 ~~~~~~~~~sgl~~leG~tv~i~aDG~~~---~~~~V~~G~itl~~~~~~v~VGl~Y~s~i~~lp~~~~~~~g~~~g~~~ 598 (681) T protein:vir:98 522 YSGEPVSHISGLEHLEGKTVSILADGAVH---PQRVVTDGAIDLDVEAGTVHIGLPITAELQTLPVAMQLDGSFGQGRVK 598 (681) T ss_pred ccCcceeeeccccCCCCcEEEEEeCCeec---CcEeecCcEEEeCcCCceEEEeeeceeEEEecceeeecCCcccCCceE Confidence 3211 1111 11233456677887643 2222222233333210 111111111 012 Q ss_pred eEEEEEee--cchhhhcC Q lcl|Aclame:pro 552 QVERITLS--TSMSEMPV 567 (567) Q Consensus 552 ~V~~i~la--~s~~EL~~ 567 (567) +|.+++|- .|.. +-+ T Consensus 599 ri~rv~lr~~~S~g-~~~ 615 (681) T protein:vir:98 599 NINKLWLRVHRSSG-IFA 615 (681) T ss_pred EEEEEEEEEEcccc-eEE Confidence 22222211 1110 000 No 21 >protein:vir:105428 Length: 472 # NCBI annotation: gene 8 protein # Family: family:all:1540 # MgeID: mge:1556 # MgeName: Sf6 # Cross-refs: genbank:acc:NP_958184;genbank:gi:41057286;genbank:GeneID:2716675 Probab=97.90 E-value=1.2e-05 Score=47.55 Aligned_cols=392 Identities=13% Similarity=0.134 Sum_probs=192.7 Q ss_pred cccccccccCCCCcccceeEecCCCCCCCCccccceeeEEEEEE-EecCCCccCCcccceeEEEecCCCEEEEccccCCC Q lcl|Aclame:pro 138 HPTSSYRLGIPAPTTAPVCTVQQGGDVSDDNPNDDETRFYTETF-VSDYGEEGPPGPASLEVTLRTPGTAVQLTLAPVPL 216 (567) Q Consensus 138 ~p~~~y~LgVpaP~~ap~~~v~~g~~~~g~~~~d~et~~Y~~Tf-Vt~~GeES~pS~~S~~v~v~~~g~~V~L~~~p~~~ 216 (567) .|. ++.|-......-...+. |.-.+ |+-+=+|+.-.-.+ ......||.+.- ..++-+. T Consensus 1 m~~------~~~pl~~G~~~~~~~~d-------------~~~~~pVN~~a~~~~~~~s~-~~l~~tPGl~~~-a~v~G~~ 59 (472) T protein:vir:10 1 MPI------QQLPLMKGVGKDFRNAD-------------YIDYLPVNMLATPKEILNSS-GYLRSFPGIAKR-SDVNGVS 59 (472) T ss_pred CCe------eeeeeccCceeeccccc-------------hhheeeeeeeeeccCCCccc-ceeecCCCceee-ccCCccc Confidence 000 01110000000000000 11111 22222232222222 222344665332 2222111 Q ss_pred CC--CccceEEEEEEEcCCCCeeEE---EEEeccCcee-eEEeccCcc------cc------Ccc-----cchhhccCCC Q lcl|Aclame:pro 217 QN--ASIKRRRIYRSASGGGEADFL---LVAELDASVL-SYTDKIPAK------NL------GPS-----LATWDYLPPP 273 (567) Q Consensus 217 ~~--~~it~~RIYRs~tggg~~e~~---lVael~~st~-sy~D~~~~~------~L------g~~-----L~t~~~~~Pp 273 (567) -| -++...-+||. . |++-|+ -|++++.+-. ++.|+...- .+ +.+ .++....+.. T Consensus 60 RG~~~~~~~g~lY~V-~--G~~LY~v~~~iGsiag~grVsMa~n~~~~av~~~g~~~~Y~yd~~v~t~~~~~~d~~~p~~ 136 (472) T protein:vir:10 60 RGVEYNMAQNAVYRV-C--GGKLYKGESEVGDVAGSGRVSMAHGRTSQAVGVNGQLVEYRYDGTVKTVSNWPTDSGFTQY 136 (472) T ss_pred cceEEEeeCCeEEEE-e--cceEeeeecceecccCcccEEEecCCcEEEEEECCceeEEEeeccchhhhccccccccccc Confidence 12 11233344443 1 112222 1233332211 333332110 00 011 1112122222 Q ss_pred CC--CceeeeecCcEEE-EEECCEEEEecCCCcccCchhh--c---eecccceEEEEEeCCeEEEEEcCcE--EEEEcCC Q lcl|Aclame:pro 274 EN--MTGLCLMANGIAA-GFAGNEVMFSEAYLPYAWPEVN--R---HTTAEDIVAICPLGTSLVVATKGEP--YLFSGVS 343 (567) Q Consensus 274 ~~--~~~l~~~~NG~l~-~a~Gn~l~FSEp~~Phawp~~y--~---~~~~~~Iv~i~pv~~gl~V~T~~~p--y~lsG~~ 343 (567) +- -+.+| .-.|++. .-.|..-||.-.+.+-..|.+| | ---|+.|++|...-+-||+.-+... |.++|.. T Consensus 137 dlg~~~dv~-f~dGyfV~~~~Gt~~~~is~l~d~~~~~~y~~fa~AE~~pD~Ivgi~~~~~~i~lfG~~TiEvw~ntG~a 215 (472) T protein:vir:10 137 ELGSVRDIT-RLRGRYAWSKDGTDSWFITDLEDESHPDRYSAQYRAESQPDGIIGIGTWRDFIVCFGSSTIEYFSLTGAT 215 (472) T ss_pred cccceeeee-eecceEEEeccCcceEEEeccCCccccccccccccccCCCCceEEEEeeccEEEEEeccceEEEEecCCC Confidence 20 22344 3358855 4446767777666665556555 2 2345999999999999999877766 9999955 Q ss_pred -cccceeEeec---ccCCcccccceeecCceEEEecCC----cEEEEcCCceeEeecccccchhHHhhhcC-ccc----E Q lcl|Aclame:pro 344 -PSTISGSKIP---SMQACLSRRSMVAMEGFVLYAGTN----GLVSVDANGNVALATEQIVSPEQWQSQFN-PAS----I 410 (567) Q Consensus 344 -p~~m~~~~l~---~~~pcvs~~siv~~~~~v~y~s~d----Glv~~~~~G~~~~vt~~~~~~~~W~~~l~-P~t----i 410 (567) +....+++.+ .+-+|.++.|+..+++.++|+|++ |.|-...+++++.|+--=++ +.|++ .+ |+- + T Consensus 216 ~~~~fpy~r~~g~~iq~Gcaa~~sv~~~~~t~~~l~~d~~g~~~V~~~~g~~~~rIST~aIE-~~i~~-y~~~e~~dA~~ 293 (472) T protein:vir:10 216 TAGAALYVAQPSLMVQKGIAGTYCKTPFADSYAFISNPATGAPSVYIIGSGQVSPIASASIE-KILRS-YTADELADGVM 293 (472) T ss_pred CcccCceeecccceeeecccCcchhhecCceEEEEecCCccccEEEEccCceeEEecCHHHH-HHHHh-cCCccccceeE Confidence 4456777755 466999999999999999999998 88888888888888554444 78876 65 664 3 Q ss_pred EEEEEcCe--EEEEEecCCCcceeEEEccCC--ceeEEEe-------eeeeEEEEEecCCeEEEEe--CCEEEEEcCC-- Q lcl|Aclame:pro 411 VAYPWRGE--YIACYTKPDGKQDVFVFSPVN--MDIRYLS-------TPFDCAWVDLAKDMMRVVT--GDKMSVLAGG-- 475 (567) Q Consensus 411 ~a~~~~G~--Y~~~y~~~~g~~~~~ifd~~~--~~~~~~~-------~~~~a~~~~~~~d~ly~~~--g~~i~~~~~g-- 475 (567) ...+.||. |+..+- + .-+.||... +--++.. -++-+..+-...+++++.. ++.||+|+.+ T Consensus 294 ~t~~~~GH~fy~LtfP--~---~Tw~yD~~t~~Wherw~~~~~g~~~~~~Ra~~~~~~~g~~~vGD~~ng~ly~l~~~~~ 368 (472) T protein:vir:10 294 ESLRFDAHELLIIHLP--R---HVLVYDASSSANGPQWCVLKTGLYDDVYRAIDFIYEGNQITCGDKLESVTGKLQFDIS 368 (472) T ss_pred EEEEeCCeEEEEEEcC--C---ceeEeecccccCceeeeeecCCCccCceEEEEEEEeCCeEEEEEcCCCeEEEEcccCc Confidence 45567898 777663 2 356777643 2221111 0222333334467888764 5679999753 Q ss_pred ---CCceeEEEEeeeEEcCCCCceeEEEEe-----eCCcCceEEEEEECCeeeEeec-------CcccCCcc--eEcCCc Q lcl|Aclame:pro 476 ---ALPSTIRWHSKIFSLPERTSFSCIRVK-----SPAPERVGITIMADDVPVIHFA-------PGTFKGSV--VRLPAA 538 (567) Q Consensus 476 ---~~~~~~~WrSK~f~~~~~~~f~~~~V~-----~~~~~~~~~~i~~d~~~~~~~~-------~~~~~~~~--~RLP~~ 538 (567) ..+.+.+--++.|..+..--|- ..|+ +....++-+.-..||.. ...+ .+..+.|. .||=.. T Consensus 369 td~G~~i~~~~~~p~~~~d~~Rv~d-~~ve~~~G~~~~adp~~~~~~sDg~~-~g~~~~~~~~~~g~~~~R~~~~RlG~~ 446 (472) T protein:vir:10 369 SQYGLQQEHLLFTPLFKADNARCFD-LEVESSTGVAQYADRLFLSATTDGIN-YGREQMIEQNEPFVYDKRVLWKRVGRI 446 (472) T ss_pred CcCCCcceEEEeccceeCCCCeEEE-EEEEeecCCCcccCceEEEeccCCcc-cchhhhhhhccCcccccceeeeeeeec Confidence 3666777778888765533332 3333 11234555545666422 1111 11112121 233333 Q ss_pred ccce-EEEEEEecceEEEEEeecchhhhc Q lcl|Aclame:pro 539 TGQN-WQVMVSGFGQVERITLSTSMSEMP 566 (567) Q Consensus 539 ~~~~-wqiei~g~~~V~~i~la~s~~EL~ 566 (567) |.+- .+|.++-..+|. |..-.-+|- T Consensus 447 r~~vgf~~r~~~~~~v~---l~ga~~~~e 472 (472) T protein:vir:10 447 RKNVGFKLRVITKSPVT---LSGAQIRIE 472 (472) T ss_pred cccceEEEEEEeccccc---eeeeeEEeC Confidence 4443 666666666665 222111222 No 22 >protein:vir:96666 Length: 462 # NCBI annotation: ORF016 # Family: family:all:2450 # MgeID: mge:1623 # MgeName: Twort # Cross-refs: genbank:acc:YP_238545;genbank:gi:66391271;genbank:GeneID:5130448 Probab=97.73 E-value=1e-06 Score=53.43 Aligned_cols=257 Identities=16% Similarity=0.207 Sum_probs=90.2 Q ss_pred Cc-cce-------eehhhhccceeeccccccceeeeEEEecccccccCccchhcCcccccceEEeee-ecCCeEeEeecc Q lcl|Aclame:pro 1 MM-PIA-------ILANSIINPLIFKPEAVKGISMPYIDITTMRGMMPRVVTSMLPEHSAVLAEDCH-FRFGVITPERQI 71 (567) Q Consensus 1 ~~-~~~-------~~~~~~~~~~~~~~~~~~~~~M~~I~i~~f~G~~pr~~p~lL~~~~a~~A~N~~-~~~G~l~P~~~~ 71 (567) |+ |=- -|--.+||-.--+= -++++|+.=-.-- -|-.--+.-++|+...-...-|.. ...|. T Consensus 181 lI~~~NViDarG~~Ls~~~ln~aa~~i--~~~fGt~TD~~~p-~~v~a~f~~~~l~~qrv~~~~n~g~~~~G~------- 250 (462) T protein:vir:96 181 LIDKDNVIDAKGESLTETLLNRSAVLI--GKSFGTATDAYMP-IGVHADFVNSVLGRQMQLMQDNSGNVNAGY------- 250 (462) T ss_pred hcCCCceeecCCCCccHHHHhhhhhhc--ccccCChhheecc-hHHHHHHHHhhcCceEEEEcCCCCceeeee------- Confidence 00 000 00000111000000 0122211100000 000111122222221111111110 11110 Q ss_pred ccccccccccceEEEEECCceEEeeCCeEEEeeCCCCCCCcceEEEcCCCeeeeeeccccccCCcccccccccccCCCCc Q lcl|Aclame:pro 72 SGVEKTFTIKPKTIFHYRDDFWFAWPDVVDVIRSPIAQDPHGRIYYTDGRFPKVTDATIATKGDGNHPTSSYRLGIPAPT 151 (567) Q Consensus 72 ~~v~~~~~~~~~Tif~~~~~~w~~w~~~V~~~~spia~D~~~Rvy~tgd~~p~~t~~~iat~g~g~~p~~~y~LgVpaP~ 151 (567) ...-++..+ +.++.=.|=+.++ |...+.+ ....| ++|+|. T Consensus 251 ---------~v~~f~s~~--------G~I~L~~s~~m~~------------~~i~~~~-----~~~~p------~ap~~~ 290 (462) T protein:vir:96 251 ---------NVQGFYSSR--------GFIKLHGSTVMEN------------ELILDES-----LQPLP------NAPQPA 290 (462) T ss_pred ---------eccceeeee--------eeeeeCCceecCc------------ccccccc-----cccCC------CCCCCC Confidence 111111111 1122111111111 1110100 01111 244443 Q ss_pred ccceeEecCCCCCCCCccccceeeEEEEEEEecCCCccCCcccceeEEEecCCCEEEEccccCCCCCCccceEEEEEEEc Q lcl|Aclame:pro 152 TAPVCTVQQGGDVSDDNPNDDETRFYTETFVSDYGEEGPPGPASLEVTLRTPGTAVQLTLAPVPLQNASIKRRRIYRSAS 231 (567) Q Consensus 152 ~ap~~~v~~g~~~~g~~~~d~et~~Y~~TfVt~~GeES~pS~~S~~v~v~~~g~~V~L~~~p~~~~~~~it~~RIYRs~t 231 (567) ...+++..+....-..+.|.-++.|+++.|+.+| ||.||++ ..+++...+..|.|.+-.++.++..-+.++|||+.. T Consensus 291 -~vsaTv~t~~~g~f~~~~d~~~y~Y~V~avs~dg-eS~PS~~-VtaTva~~~~gv~ltIt~~a~~~~~~~~~~IYRk~~ 367 (462) T protein:vir:96 291 -TVKATVETGKKGLFTDEHDRAELTYKVVVNSDDA-QSAPSEA-VTATVNNATDGVKLEISVNAMYQQQPQFVSIYRQGR 367 (462) T ss_pred -ceeEEEEeCCCCCCCCccCceeEEEEEEEECCCC-cccccee-eEeeeecccccceEEEEEcCCccccceEEEEEeecC Confidence 1222333332222123335567889999999987 7889885 455555555556666666666677788999999953 Q ss_pred CCCCeeEEEEEecc------CceeeEEeccCccc------cCccc-chhhccC--CCCCCceeeeecCcEEEEEECCEEE Q lcl|Aclame:pro 232 GGGEADFLLVAELD------ASVLSYTDKIPAKN------LGPSL-ATWDYLP--PPENMTGLCLMANGIAAGFAGNEVM 296 (567) Q Consensus 232 ggg~~e~~lVael~------~st~sy~D~~~~~~------Lg~~L-~t~~~~~--Pp~~~~~l~~~~NG~l~~a~Gn~l~ 296 (567) ++++|++++.++ .++++|+|.-.-.. .|+.- .+..|.. |+--+ -.+..|- .-.--++| T Consensus 368 --~sg~y~li~rv~~~~~n~~gt~tf~D~n~~iPgt~~~fVge~~p~vi~~~qllpm~~~--plA~~n~---~~~waVl~ 440 (462) T protein:vir:96 368 --KTGDFYLIKRLGMKEVNDEGKLVFYDLNETIPETTDVFVGEMSPQVLHLFELLPMMKL--PLAQINA---SVTFAVLW 440 (462) T ss_pred --CccccceeeeeeceeecCCcceeEeeccCCCCCcccceeecCCchhhhhhhhhhhhhc--Ccccccc---hhhhhhhh Confidence 556899999884 45667877532210 01100 1112222 11110 0011110 00112223 Q ss_pred EecCCCcccCchhh-ceecccceEEEE Q lcl|Aclame:pro 297 FSEAYLPYAWPEVN-RHTTAEDIVAIC 322 (567) Q Consensus 297 FSEp~~Phawp~~y-~~~~~~~Iv~i~ 322 (567) |--+.. + -|+++ ++.. |+-|. T Consensus 441 yG~Lal-~-~Pk~~~~ikN---v~~~~ 462 (462) T protein:vir:96 441 YGALAL-R-APKKWVRIKN---VKYIV 462 (462) T ss_pred hhHHHh-h-cccccEEEEE---EEEeC Confidence 221110 0 15553 3322 22222 No 23 >protein:vir:9268 Length: 472 # NCBI annotation: 10 # Family: family:all:1540 # MgeID: mge:164 # MgeName: ST64T # Cross-refs: genbank:acc:NP_720332;genbank:gi:24371590;genbank:GeneID:955815 Probab=97.35 E-value=8.8e-05 Score=42.83 Aligned_cols=393 Identities=11% Similarity=0.061 Sum_probs=189.8 Q ss_pred eeeccccccCCcccccccccccCCCCcccceeEecCCCCCCCCccccceeeEEEEEEEecCCCccCCcccceeEEEecCC Q lcl|Aclame:pro 125 VTDATIATKGDGNHPTSSYRLGIPAPTTAPVCTVQQGGDVSDDNPNDDETRFYTETFVSDYGEEGPPGPASLEVTLRTPG 204 (567) Q Consensus 125 ~t~~~iat~g~g~~p~~~y~LgVpaP~~ap~~~v~~g~~~~g~~~~d~et~~Y~~TfVt~~GeES~pS~~S~~v~v~~~g 204 (567) |---+| |-+. ........+.. ..+. -|+-+..++...-.| ......+| T Consensus 1 m~~~~i-----------------pl~~--g~~~~~~~a~~----------~~~~--pvn~y~~~~~~~~ss-~~Lr~~pG 48 (472) T protein:vir:92 1 MPIQQL-----------------PMMK--GMGKDFKNADY----------IDYL--PINMLATPKEVLDSS-GYLRSFPG 48 (472) T ss_pred Cceeec-----------------cccc--cccccCccCcc----------eeee--ecccccccccccccc-cceeeccc Confidence 000011 1000 00000000000 0000 123232222222222 22344566 Q ss_pred CEEEEccccCCCCCC--ccceEEEEEEEcCCCCeeEEE---EEeccCcee-eEEeccCcccc--Cccc-----c--hhhc Q lcl|Aclame:pro 205 TAVQLTLAPVPLQNA--SIKRRRIYRSASGGGEADFLL---VAELDASVL-SYTDKIPAKNL--GPSL-----A--TWDY 269 (567) Q Consensus 205 ~~V~L~~~p~~~~~~--~it~~RIYRs~tggg~~e~~l---Vael~~st~-sy~D~~~~~~L--g~~L-----~--t~~~ 269 (567) .... ...+-+.-|- +...-.+||..- ..-|+- +++++.+-. ++.|+...-.. +..+ . +... T Consensus 49 ~~~~-a~~~G~~RG~~~~~~~~~ly~V~G---~~Ly~v~~~iG~i~gsgrVsMa~n~~~~av~~~~~~~~Y~~~~~~~t~ 124 (472) T protein:vir:92 49 IAKR-NDVNGVSRGVEYNTAQNAVYRVCG---GKLYKGEAVVGDVAGSGRVSMAHGRTSQAVGVNGQLIEYRYDGAVKTV 124 (472) T ss_pred ceee-cCCCCcccceeeeeeCCeEEEEeC---cceEEEEeeEeeccCcccEEEecCCeEEEEEECCceeEEEEecchhhh Confidence 5332 1122222121 122334565321 123333 344443322 44444422111 1100 0 1111 Q ss_pred c-CCCCCC---------ceeeeecCcEEE-EEECCEEEEecCCCcccCchhh--ce---ecccceEEEEEeCCeEEEEEc Q lcl|Aclame:pro 270 L-PPPENM---------TGLCLMANGIAA-GFAGNEVMFSEAYLPYAWPEVN--RH---TTAEDIVAICPLGTSLVVATK 333 (567) Q Consensus 270 ~-~Pp~~~---------~~l~~~~NG~l~-~a~Gn~l~FSEp~~Phawp~~y--~~---~~~~~Iv~i~pv~~gl~V~T~ 333 (567) . .|.++. +.+| .-.|++. .-.|...+|.-.+.+-..|.+| |- --|+.|++|...-+-||+.-+ T Consensus 125 ~~~~~d~~f~~~dl~~~~dv~-f~dGyfV~~~~gt~~~~iS~l~d~~~~~~y~~fa~AE~~pD~Ivgi~~~~~~l~lfG~ 203 (472) T protein:vir:92 125 SNWPADSGFTQYELGSVRDIT-RLRGRYAWSKDGTDSWFITDLEDESHPDRYSAEYRAESQPDGIIGIGSWRDFIVCFGS 203 (472) T ss_pred hcccCccccccccccceeEEE-EecceEEEccCCCceEEEeccCCccccccccccccccCCCCceEEEEeeccEEEEEec Confidence 1 122211 1233 3357754 3346667777666666667776 33 345999999999999999877 Q ss_pred CcE--EEEEcCC-cccceeEeec---ccCCcccccceeecCceEEEecCCc----EEEEcCCceeEeecccccchhHHhh Q lcl|Aclame:pro 334 GEP--YLFSGVS-PSTISGSKIP---SMQACLSRRSMVAMEGFVLYAGTNG----LVSVDANGNVALATEQIVSPEQWQS 403 (567) Q Consensus 334 ~~p--y~lsG~~-p~~m~~~~l~---~~~pcvs~~siv~~~~~v~y~s~dG----lv~~~~~G~~~~vt~~~~~~~~W~~ 403 (567) ... |.++|.. ++...+++.+ .+-+|.++.|+..+++.++|+|+++ .|-...+++++.|+--=++ ++|++ T Consensus 204 ~TiEvw~ntG~ad~~~fpy~r~~g~~i~~Gcaa~~sv~~~~~s~~~l~~~~~g~~~V~~~~g~qa~rIST~aIE-~~i~~ 282 (472) T protein:vir:92 204 STIEYFSLTGATTVGAALYVAQPSLMVQKGIAGTYCKTPFADSYAFISHPATGAPSVYIIGSGQASPIATASIE-KIIRS 282 (472) T ss_pred cceEEEEecCCCCcCcCceEEcCcceeeecccCcchhhecCceEEEEecCCCcccEEEEccCceeEEecCHHHH-HHHHh Confidence 766 9999997 4566677765 5679999999999999999999998 3555567788888544444 77876 Q ss_pred hcC-ccc----EEEEEEcCe--EEEEEecCCCcceeEEEccCCce---eEEEee------eeeEEEEEecCCeEEEEe-- Q lcl|Aclame:pro 404 QFN-PAS----IVAYPWRGE--YIACYTKPDGKQDVFVFSPVNMD---IRYLST------PFDCAWVDLAKDMMRVVT-- 465 (567) Q Consensus 404 ~l~-P~t----i~a~~~~G~--Y~~~y~~~~g~~~~~ifd~~~~~---~~~~~~------~~~a~~~~~~~d~ly~~~-- 465 (567) .+ |+- +...+.||. |+..+- + .-+.||...+. -++... ++-+...-...+++-+.. T Consensus 283 -y~~~e~~~a~~~s~~~eGH~fy~LtfP--~---~Tw~yD~at~~~~e~W~~~~sg~~~~~~R~~~~~~~~g~~ivGD~~ 356 (472) T protein:vir:92 283 -YTADELATGVMEALRFDSHELLIIHLP--R---HVLVYDASSSQNGPQWCVLKTGLYDDVYRAIDFMYEGNQITCGDKS 356 (472) T ss_pred -cCcchhceeeEEEEEecCeeEEEEEcC--C---ceEEEEcccCcCCceeeeecCCCcccceeEEEEEeeCCeEEEEEcC Confidence 55 554 455667798 777663 2 35788875431 122221 122222233345555543 Q ss_pred CCEEEEEc--C---CCCceeEEEEeeeEEcCCCCceeEEEEeeC-----CcCceEEEEEECCeeeEeecCcccCCcc--- Q lcl|Aclame:pro 466 GDKMSVLA--G---GALPSTIRWHSKIFSLPERTSFSCIRVKSP-----APERVGITIMADDVPVIHFAPGTFKGSV--- 532 (567) Q Consensus 466 g~~i~~~~--~---g~~~~~~~WrSK~f~~~~~~~f~~~~V~~~-----~~~~~~~~i~~d~~~~~~~~~~~~~~~~--- 532 (567) ++.||+|+ . ++.+....--+..|..+..--| -..|+.. ....+-++-=-||... .-..-..-+++ T Consensus 357 nG~ly~l~~~~~t~~~~~~~~~~~~P~~~~dn~R~~-d~eve~~~Gv~q~~d~v~L~wSddG~~~-~~~~~~~~g~~g~~ 434 (472) T protein:vir:92 357 EAVTGQLQFDISSQYDKQQEHLLFTPIFKADNARCF-DLEVESSTGVAQYADRLFLSATTDGINY-GREQMIEQNEPFVY 434 (472) T ss_pred CCeEEEEeccccccCCCcceEEEEeceEecCCCEEE-EEeeeccCCCCCcCceEEEEeecccccc-ccceeeccCCccch Confidence 56788873 2 3333333333444444333222 2444321 1223333322344322 21111111222 Q ss_pred ------eEcCCcccce-EEEEEEecceEEEEEeecchh Q lcl|Aclame:pro 533 ------VRLPAATGQN-WQVMVSGFGQVERITLSTSMS 563 (567) Q Consensus 533 ------~RLP~~~~~~-wqiei~g~~~V~~i~la~s~~ 563 (567) -||=..|.+. .+|+++.+.+|.---+---|| T Consensus 435 ~tr~~~~RlG~~r~~v~f~~r~~~~~~~~l~g~~~~~E 472 (472) T protein:vir:92 435 DKRVLWKRVGRIRRLIGFKLRVITKSPVTLSGCQIRLE 472 (472) T ss_pred hcceeeeeeeecccceeEEEEEEecCcceeeeeEEeeC Confidence 2444444454 778888888887666666666 No 24 >protein:vir:100960 Length: 472 # NCBI annotation: gp10 # Family: family:all:1540 # MgeID: mge:1509 # MgeName: ST104 # Cross-refs: genbank:acc:YP_006412;genbank:gi:46358704;genbank:GeneID:2777110 Probab=96.69 E-value=0.0004 Score=39.19 Aligned_cols=393 Identities=10% Similarity=0.070 Sum_probs=187.3 Q ss_pred eeeccccccCCcccccccccccCCCCcccceeEecCCCCCCCCccccceeeEEEEEEEecCCCccCCcccceeEEEecCC Q lcl|Aclame:pro 125 VTDATIATKGDGNHPTSSYRLGIPAPTTAPVCTVQQGGDVSDDNPNDDETRFYTETFVSDYGEEGPPGPASLEVTLRTPG 204 (567) Q Consensus 125 ~t~~~iat~g~g~~p~~~y~LgVpaP~~ap~~~v~~g~~~~g~~~~d~et~~Y~~TfVt~~GeES~pS~~S~~v~v~~~g 204 (567) |---+ ||-+ .........+. ...+. -|+-+..++...-.| ......+| T Consensus 1 m~~~~-----------------ipl~--~g~~~~~~~a~----------~~~~~--pvn~y~~~~~~~~ss-~~Lr~~pG 48 (472) T protein:vir:10 1 MPIQQ-----------------LPMM--KGMGKDFKNAD----------YIDYL--PINMLATPKEVLNSS-GYLRSFPG 48 (472) T ss_pred Cceee-----------------cccc--cccccCCCcCc----------ceeee--eeccccccccccccc-cceeeccc Confidence 00000 0100 00000000000 00000 133333322222222 22344566 Q ss_pred CEEEEccccCCCCCC--ccceEEEEEEEcCCCCeeEEE---EEeccCcee-eEEeccCcccc--Ccc-----cc--hhhc Q lcl|Aclame:pro 205 TAVQLTLAPVPLQNA--SIKRRRIYRSASGGGEADFLL---VAELDASVL-SYTDKIPAKNL--GPS-----LA--TWDY 269 (567) Q Consensus 205 ~~V~L~~~p~~~~~~--~it~~RIYRs~tggg~~e~~l---Vael~~st~-sy~D~~~~~~L--g~~-----L~--t~~~ 269 (567) .... ...+-+.-|- +...-.+||..- ..-|+- +++++.+-. ++.|+...-.. +.. +. +... T Consensus 49 ~~~~-a~~~G~~RG~~~~~~~~~ly~V~G---~~Ly~v~~~iG~i~gsgrVsMa~n~~~~~v~~~~~~~~Y~~~~~~~t~ 124 (472) T protein:vir:10 49 IAKR-NDVNGVSRGVEYNTAQNAVYRVCG---GKLYKGEAVVGDVAGSGRVSMAHGRTSQAVGVNGQLIEYRYDGAVKTV 124 (472) T ss_pred ceee-cCCCCcccceeeeeeCCeEEEEeC---cceEEEEeeEeeccCcccEEEeeCCeEEEEEECCceeEEEEecchhhh Confidence 5332 1122222121 122334665321 123333 344443322 44444422111 110 00 1111 Q ss_pred c-CCCCCC---------ceeeeecCcEEE-EEECCEEEEecCCCcccCchhh--ce---ecccceEEEEEeCCeEEEEEc Q lcl|Aclame:pro 270 L-PPPENM---------TGLCLMANGIAA-GFAGNEVMFSEAYLPYAWPEVN--RH---TTAEDIVAICPLGTSLVVATK 333 (567) Q Consensus 270 ~-~Pp~~~---------~~l~~~~NG~l~-~a~Gn~l~FSEp~~Phawp~~y--~~---~~~~~Iv~i~pv~~gl~V~T~ 333 (567) . .|.++. +.+| .-.|++. .-.|...+|.-.+.+-..|.+| |- --|+.|++|...-+-||+.-+ T Consensus 125 ~~~~~d~~f~~~dl~~~~dv~-f~dGyfV~~~~gt~~~~iS~l~d~~~~~~y~~fa~AE~~pD~Ivgi~~~~~~l~lfG~ 203 (472) T protein:vir:10 125 SNWPADSGFTQYELGSVRDIT-RLRGRYAWSKDGTDSWFITDLEDESHPDRYSAEYRAESQPDGIIGIGSWRDFIVCFGS 203 (472) T ss_pred hcccCccccccccccceeEEE-EecceEEEccCCCceEEEeccCCccccccccccccccCCCCceEEEEeeccEEEEEec Confidence 1 122211 1233 3357754 3346667777666666667776 33 345999999999999999877 Q ss_pred CcE--EEEEcCC-cccceeEeec---ccCCcccccceeecCceEEEecCCc----EEEEcCCceeEeecccccchhHHhh Q lcl|Aclame:pro 334 GEP--YLFSGVS-PSTISGSKIP---SMQACLSRRSMVAMEGFVLYAGTNG----LVSVDANGNVALATEQIVSPEQWQS 403 (567) Q Consensus 334 ~~p--y~lsG~~-p~~m~~~~l~---~~~pcvs~~siv~~~~~v~y~s~dG----lv~~~~~G~~~~vt~~~~~~~~W~~ 403 (567) ... |..+|.. ++...+++.+ .+-+|.++.|+..+++.++|+|+++ .|-...+++++.|+--=++ ++|++ T Consensus 204 ~TiEvw~ntG~ad~~~fpy~r~~g~~i~~Gcaa~~sv~~~~~s~~~l~~~~~g~~~V~~~~g~qa~rIST~aIE-~~i~~ 282 (472) T protein:vir:10 204 STIEYFSLTGATTVGAALYVAQPSLMVQKGIAGTYCKTPFADSYAFISHPATGAPSVYIIGSGQASPIATASIE-KIIRS 282 (472) T ss_pred cceEEEEecCCCCcCcCceEEcCcceeeecccCcchhhecCceEEEEecCCCcccEEEEccCceeEEecCHHHH-HHHHh Confidence 766 9999997 4566677765 5679999999999999999999998 3555567788888555454 78886 Q ss_pred hcC-ccc----EEEEEEcCe--EEEEEecCCCcceeEEEccCCc---eeEEEe------eeeeEEEEEecCCeEEEEe-- Q lcl|Aclame:pro 404 QFN-PAS----IVAYPWRGE--YIACYTKPDGKQDVFVFSPVNM---DIRYLS------TPFDCAWVDLAKDMMRVVT-- 465 (567) Q Consensus 404 ~l~-P~t----i~a~~~~G~--Y~~~y~~~~g~~~~~ifd~~~~---~~~~~~------~~~~a~~~~~~~d~ly~~~-- 465 (567) .+ |+. +...+.||. |+..+- + .-+.||...+ .-++.+ -++-+...-...+++-+.. T Consensus 283 -y~~~e~~~A~~~t~~~~GH~fy~LtfP--~---~Tw~yD~at~~w~erw~~~~~g~~~~~~R~~~~~~~~g~~ivGD~~ 356 (472) T protein:vir:10 283 -YTAEELATGVMETLRFDSHELLIIHLP--R---HVLVYDASSSQNGPQWCVLKTGLYDDVYRAVDFMYEGNQITCGDKS 356 (472) T ss_pred -cCCccccceEEEEEEeCCeEEEEEEcC--C---eeEEEEcccCcccceeeeecCCCcccceeEEEEEeeCCeEEEEEcC Confidence 54 773 345567898 777663 2 3688887543 111111 1122222233345555543 Q ss_pred CCEEEEEcCCC-----CceeEEEEeeeEEcCCCCceeEEEEeeC-----CcCceEEEEEECCeeeEeecC-------ccc Q lcl|Aclame:pro 466 GDKMSVLAGGA-----LPSTIRWHSKIFSLPERTSFSCIRVKSP-----APERVGITIMADDVPVIHFAP-------GTF 528 (567) Q Consensus 466 g~~i~~~~~g~-----~~~~~~WrSK~f~~~~~~~f~~~~V~~~-----~~~~~~~~i~~d~~~~~~~~~-------~~~ 528 (567) ++.||+|+-+. .+..-.--+..+.-+..--| -..|+.. ....+-++-=-||.. ..-.. +.. T Consensus 357 nG~ly~ld~~~~t~~g~~~~~~~~~p~l~~dn~R~~-d~eve~~~Gv~~~~d~v~L~wSddG~~-~~~~~~~~~g~~g~~ 434 (472) T protein:vir:10 357 EALTGQLQFDISSQYGLQQEHLLFTPLFKADNARCF-DLEVESSTGVAQYADRLFLSATTDGIN-YGREQMIEQNEPFVY 434 (472) T ss_pred CCeEEEEecccCCCCCCcccceEEcccccCCCCEEE-EEeeeccCCCCCcCcEEEEEeeccccc-cccceeeccCCccch Confidence 55677776421 22222222333322221111 1333311 122333332223332 22111 111 Q ss_pred CCcc--eEcCCcccce-EEEEEEecceEEEEEeecchh Q lcl|Aclame:pro 529 KGSV--VRLPAATGQN-WQVMVSGFGQVERITLSTSMS 563 (567) Q Consensus 529 ~~~~--~RLP~~~~~~-wqiei~g~~~V~~i~la~s~~ 563 (567) +.|. -||=..|.+. .+|+++.+.+|.---+---|| T Consensus 435 ~tr~~~~RlG~~r~~v~f~~r~~~~~~~~l~g~~~~~E 472 (472) T protein:vir:10 435 DKRVIWKRVGRIRRLIGFKLRVITKSPVTLSGCQIRLE 472 (472) T ss_pred hcceeeeeeeecccceeEEEEEEecCcceeeeeEEeeC Confidence 1111 2444444454 778888888887766666666 No 25 >protein:vir:95603 Length: 463 # NCBI annotation: ORF016 # Family: family:all:2450 # MgeID: mge:1577 # MgeName: G1 # Cross-refs: genbank:acc:YP_240903;genbank:gi:66394965;genbank:GeneID:5132544 Probab=96.13 E-value=0.00014 Score=41.72 Aligned_cols=254 Identities=15% Similarity=0.184 Sum_probs=93.0 Q ss_pred Cccceeehhhhc---cceeeccccccceeeeEEEecc-cc---------cccCccchhcCcccccceEEeee-ecCCeEe Q lcl|Aclame:pro 1 MMPIAILANSII---NPLIFKPEAVKGISMPYIDITT-MR---------GMMPRVVTSMLPEHSAVLAEDCH-FRFGVIT 66 (567) Q Consensus 1 ~~~~~~~~~~~~---~~~~~~~~~~~~~~M~~I~i~~-f~---------G~~pr~~p~lL~~~~a~~A~N~~-~~~G~l~ 66 (567) ++ ---|.|= ++| .++=|-++.++|.. |+ |-.--+.-++|+...-...-|.. ...|. T Consensus 181 lI---d~enviDarG~~L-----s~~~ln~Aa~~i~~~fGt~TD~~lp~~vka~f~~~~l~~qrv~~~~N~~~~~~G~-- 250 (463) T protein:vir:95 181 LI---DKNNVINAKGNQL-----TEKHLNEAAVRIGKGFGTATDAYMPIGVHADFVNSILGRQMQLMQDNSGNVNTGY-- 250 (463) T ss_pred hc---CCCCeeecCCCcc-----cHHHHhhhhhhhhcccCChhheecchHHHHHHHHHhcCceEEEEcCCCCceeeee-- Confidence 00 0001000 000 00001112222211 00 11111222333322222211111 11110 Q ss_pred EeeccccccccccccceEEEEECCceEEeeCCeEEEeeCCCCCCCcceEEEcCCCeeeeeeccccccCCccccccccccc Q lcl|Aclame:pro 67 PERQISGVEKTFTIKPKTIFHYRDDFWFAWPDVVDVIRSPIAQDPHGRIYYTDGRFPKVTDATIATKGDGNHPTSSYRLG 146 (567) Q Consensus 67 P~~~~~~v~~~~~~~~~Tif~~~~~~w~~w~~~V~~~~spia~D~~~Rvy~tgd~~p~~t~~~iat~g~g~~p~~~y~Lg 146 (567) ...-|+... +.++.=.|=+.++|. ..+ ++..+. T Consensus 251 --------------~v~~f~s~~--------G~I~L~~s~~m~~~~------------il~-------------~~~~~~ 283 (463) T protein:vir:95 251 --------------SVNGFYSSR--------GFIKLHGSTVMENEL------------ILD-------------ESLQPL 283 (463) T ss_pred --------------eccceeeee--------eeeeeCCceecCCcc------------ccc-------------chhhcC Confidence 001111111 112211111121111 000 011122 Q ss_pred CCCCccc-ceeEecCCCCCCCCccccceeeEEEEEEEecCCCccCCcccceeEEEecCCCEEEEccccCCCCCCccceEE Q lcl|Aclame:pro 147 IPAPTTA-PVCTVQQGGDVSDDNPNDDETRFYTETFVSDYGEEGPPGPASLEVTLRTPGTAVQLTLAPVPLQNASIKRRR 225 (567) Q Consensus 147 VpaP~~a-p~~~v~~g~~~~g~~~~d~et~~Y~~TfVt~~GeES~pS~~S~~v~v~~~g~~V~L~~~p~~~~~~~it~~R 225 (567) ..+|..+ +++++.+....+-..+.|.-.+.|++.. .+.+.||+||++ ...|+...++.|.|..-+++.++...+.+- T Consensus 284 p~ap~~~~~tatv~~~~~~~~~~~~~~a~~~Y~vv~-~s~~geS~pS~i-vtaT~a~~~~gv~l~It~~a~~~~~~~~v~ 361 (463) T protein:vir:95 284 PNAPQPAKVTATVETKQKGAFENEEDRAGLSYKVVV-NSDDAQSAPSEE-VTATVSNVDDGVKLSINVNAMYQQQPQFVS 361 (463) T ss_pred CCCccCceeEEEEeeccCCCCCCcccccceEEEEEE-ECCCCCcccchh-eeeeeeeccceEEEEEEecCCcccceeEEE Confidence 3334333 2233433221111113344456777764 455668999986 344454445667777777777777889999 Q ss_pred EEEEEcCCCCeeEEEEEeccC------ceeeEEeccCcc------ccCccc-chhhccCCCCCCceeeeecCcEEEEEEC Q lcl|Aclame:pro 226 IYRSASGGGEADFLLVAELDA------SVLSYTDKIPAK------NLGPSL-ATWDYLPPPENMTGLCLMANGIAAGFAG 292 (567) Q Consensus 226 IYRs~tggg~~e~~lVael~~------st~sy~D~~~~~------~Lg~~L-~t~~~~~Pp~~~~~l~~~~NG~l~~a~G 292 (567) |||+.. ++++|++++.++. ++++|+|.-.-. -.++.- ++..|....+=+|.-.+.-|- .... T Consensus 362 IYR~~~--~~g~~~~i~rv~v~~an~~gttt~~D~n~~IPgt~~vfVgems~~ti~~~ellPm~klpLA~~~~---~~~w 436 (463) T protein:vir:95 362 IYRQGK--ETGMYFLIKRVPVKDAQEDGTIVFVDKNETLPETADVFVGEMSPQVVHLFELLPMMKLPLAQINA---SITF 436 (463) T ss_pred EEeecC--CCCcceeEEEEEecccCCCceEEEeecccccCCceeEeeeccCchhhhhHhhhHhhhCCchhccc---hhhh Confidence 999964 4568999998833 467888753211 112111 233333333222221122221 1122 Q ss_pred CEEEEecCCCcccCchhh-ceecccceEEEEEe Q lcl|Aclame:pro 293 NEVMFSEAYLPYAWPEVN-RHTTAEDIVAICPL 324 (567) Q Consensus 293 n~l~FSEp~~Phawp~~y-~~~~~~~Iv~i~pv 324 (567) -++||--+.. + -|+++ ++.. | .-.|| T Consensus 437 aVl~YGaLal-~-~Pk~~~~ikN---v-~~~~v 463 (463) T protein:vir:95 437 AVLWYGALAL-R-APKKWARIKN---V-RYIAV 463 (463) T ss_pred HHHHhhHHHh-h-ccccceEEEE---e-eEecC Confidence 3333331111 0 15553 2221 1 11122 No 26 >protein:vir:99311 Length: 463 # NCBI annotation: putative capsid protein # Family: family:all:2450 # MgeID: mge:1655 # MgeName: K # Cross-refs: genbank:acc:YP_024474;genbank:gi:48696433;genbank:GeneID:2948039 Probab=96.13 E-value=0.00014 Score=41.72 Aligned_cols=254 Identities=15% Similarity=0.184 Sum_probs=93.0 Q ss_pred Cccceeehhhhc---cceeeccccccceeeeEEEecc-cc---------cccCccchhcCcccccceEEeee-ecCCeEe Q lcl|Aclame:pro 1 MMPIAILANSII---NPLIFKPEAVKGISMPYIDITT-MR---------GMMPRVVTSMLPEHSAVLAEDCH-FRFGVIT 66 (567) Q Consensus 1 ~~~~~~~~~~~~---~~~~~~~~~~~~~~M~~I~i~~-f~---------G~~pr~~p~lL~~~~a~~A~N~~-~~~G~l~ 66 (567) ++ ---|.|= ++| .++=|-++.++|.. |+ |-.--+.-++|+...-...-|.. ...|. T Consensus 181 lI---d~enviDarG~~L-----s~~~ln~Aa~~i~~~fGt~TD~~lp~~vka~f~~~~l~~qrv~~~~N~~~~~~G~-- 250 (463) T protein:vir:99 181 LI---DKNNVINAKGNQL-----TEKHLNEAAVRIGKGFGTATDAYMPIGVHADFVNSILGRQMQLMQDNSGNVNTGY-- 250 (463) T ss_pred hc---CCCCeeecCCCcc-----cHHHHhhhhhhhhcccCChhheecchHHHHHHHHHhcCceEEEEcCCCCceeeee-- Confidence 00 0001000 000 00001112222211 00 11111222333322222211111 11110 Q ss_pred EeeccccccccccccceEEEEECCceEEeeCCeEEEeeCCCCCCCcceEEEcCCCeeeeeeccccccCCccccccccccc Q lcl|Aclame:pro 67 PERQISGVEKTFTIKPKTIFHYRDDFWFAWPDVVDVIRSPIAQDPHGRIYYTDGRFPKVTDATIATKGDGNHPTSSYRLG 146 (567) Q Consensus 67 P~~~~~~v~~~~~~~~~Tif~~~~~~w~~w~~~V~~~~spia~D~~~Rvy~tgd~~p~~t~~~iat~g~g~~p~~~y~Lg 146 (567) ...-|+... +.++.=.|=+.++|. ..+ ++..+. T Consensus 251 --------------~v~~f~s~~--------G~I~L~~s~~m~~~~------------il~-------------~~~~~~ 283 (463) T protein:vir:99 251 --------------SVNGFYSSR--------GFIKLHGSTVMENEL------------ILD-------------ESLQPL 283 (463) T ss_pred --------------eccceeeee--------eeeeeCCceecCCcc------------ccc-------------chhhcC Confidence 001111111 112211111121111 000 011122 Q ss_pred CCCCccc-ceeEecCCCCCCCCccccceeeEEEEEEEecCCCccCCcccceeEEEecCCCEEEEccccCCCCCCccceEE Q lcl|Aclame:pro 147 IPAPTTA-PVCTVQQGGDVSDDNPNDDETRFYTETFVSDYGEEGPPGPASLEVTLRTPGTAVQLTLAPVPLQNASIKRRR 225 (567) Q Consensus 147 VpaP~~a-p~~~v~~g~~~~g~~~~d~et~~Y~~TfVt~~GeES~pS~~S~~v~v~~~g~~V~L~~~p~~~~~~~it~~R 225 (567) ..+|..+ +++++.+....+-..+.|.-.+.|++.. .+.+.||+||++ ...|+...++.|.|..-+++.++...+.+- T Consensus 284 p~ap~~~~~tatv~~~~~~~~~~~~~~a~~~Y~vv~-~s~~geS~pS~i-vtaT~a~~~~gv~l~It~~a~~~~~~~~v~ 361 (463) T protein:vir:99 284 PNAPQPAKVTATVETKQKGAFENEEDRAGLSYKVVV-NSDDAQSAPSEE-VTATVSNVDDGVKLSINVNAMYQQQPQFVS 361 (463) T ss_pred CCCccCceeEEEEeeccCCCCCCcccccceEEEEEE-ECCCCCcccchh-eeeeeeeccceEEEEEEecCCcccceeEEE Confidence 3334333 2233433221111113344456777764 455668999986 344454445667777777777777889999 Q ss_pred EEEEEcCCCCeeEEEEEeccC------ceeeEEeccCcc------ccCccc-chhhccCCCCCCceeeeecCcEEEEEEC Q lcl|Aclame:pro 226 IYRSASGGGEADFLLVAELDA------SVLSYTDKIPAK------NLGPSL-ATWDYLPPPENMTGLCLMANGIAAGFAG 292 (567) Q Consensus 226 IYRs~tggg~~e~~lVael~~------st~sy~D~~~~~------~Lg~~L-~t~~~~~Pp~~~~~l~~~~NG~l~~a~G 292 (567) |||+.. ++++|++++.++. ++++|+|.-.-. -.++.- ++..|....+=+|.-.+.-|- .... T Consensus 362 IYR~~~--~~g~~~~i~rv~v~~an~~gttt~~D~n~~IPgt~~vfVgems~~ti~~~ellPm~klpLA~~~~---~~~w 436 (463) T protein:vir:99 362 IYRQGK--ETGMYFLIKRVPVKDAQEDGTIVFVDKNETLPETADVFVGEMSPQVVHLFELLPMMKLPLAQINA---SITF 436 (463) T ss_pred EEeecC--CCCcceeEEEEEecccCCCceEEEeecccccCCceeEeeeccCchhhhhHhhhHhhhCCchhccc---hhhh Confidence 999964 4568999998833 467888753211 112111 233333333222221122221 1122 Q ss_pred CEEEEecCCCcccCchhh-ceecccceEEEEEe Q lcl|Aclame:pro 293 NEVMFSEAYLPYAWPEVN-RHTTAEDIVAICPL 324 (567) Q Consensus 293 n~l~FSEp~~Phawp~~y-~~~~~~~Iv~i~pv 324 (567) -++||--+.. + -|+++ ++.. | .-.|| T Consensus 437 aVl~YGaLal-~-~Pk~~~~ikN---v-~~~~v 463 (463) T protein:vir:99 437 AVLWYGALAL-R-APKKWARIKN---V-RYIAV 463 (463) T ss_pred HHHHhhHHHh-h-ccccceEEEE---e-eEecC Confidence 3333331111 0 15553 2221 1 11122 No 27 >protein:vir:80835 Length: 464 # NCBI annotation: putative major capsid protein # Family: family:all:2450 # MgeID: mge:1885 # MgeName: phiEF24C # Cross-refs: genbank:acc:YP_001504125;genbank:gi:158079312;genbank:GeneID:5666484 Probab=96.06 E-value=0.00012 Score=42.17 Aligned_cols=284 Identities=18% Similarity=0.179 Sum_probs=104.3 Q ss_pred Ccccee-ehhhhcccee------------------e--------ccccccceeeeEEEecccccccCccchhcCcccccc Q lcl|Aclame:pro 1 MMPIAI-LANSIINPLI------------------F--------KPEAVKGISMPYIDITTMRGMMPRVVTSMLPEHSAV 53 (567) Q Consensus 1 ~~~~~~-~~~~~~~~~~------------------~--------~~~~~~~~~M~~I~i~~f~G~~pr~~p~lL~~~~a~ 53 (567) .+-||. |.|+|.+|+- | .|+.=+|++ |-|.+--++| T Consensus 119 ~vsia~~lvn~~~d~~~~~~~dai~~va~tiE~a~FyGds~l~~~~~~~~gle--------FDGl~~lI~~--------- 181 (464) T protein:vir:80 119 NMSIATGLVNNIEDPMRILTDDAISVVAKTIEWASFYGDSDLSENPDAGSGLE--------FDGLAKLIDK--------- 181 (464) T ss_pred eeeeehhhhcchhhHHHHHHHHHHHHHHHHHHHHHhhhccccCCCCCCccccc--------hhhhHhhcCC--------- Confidence 111111 2333333321 0 144444444 5555433322 Q ss_pred eEEee-eecCCeEeEeeccccccccccccceEEEEECCceEEeeCCeEEEeeCCCCCCCcceEEEcCC------------ Q lcl|Aclame:pro 54 LAEDC-HFRFGVITPERQISGVEKTFTIKPKTIFHYRDDFWFAWPDVVDVIRSPIAQDPHGRIYYTDG------------ 120 (567) Q Consensus 54 ~A~N~-~~~~G~l~P~~~~~~v~~~~~~~~~Tif~~~~~~w~~w~~~V~~~~spia~D~~~Rvy~tgd------------ 120 (567) .|+ +++.+.|+ .+.++. ++.....=|--..+.|+..-..-+++- ..-.-+|+.+++. T Consensus 182 --~NViDarG~~Ls----~~~ln~-Aa~~i~~~fGt~TD~~lp~~v~a~f~n---~~l~~q~~~~~~n~~~~~~G~~v~~ 251 (464) T protein:vir:80 182 --HNVLDAKGASLT----EALLNQ-ASVLVGKGYGTPTDAYMPIGVQADFVN---QQLDRQVQVISDNGQNATMGFNVKG 251 (464) T ss_pred --CceeecCCCCcC----HHHHhh-hhhhhhcccCChhhcccchhHHHHHHh---hhcCceeEEEcCCCCcceeeeeccc Confidence 222 12222232 111111 111111101001111211110000000 0000112222211 Q ss_pred -----CeeeeeeccccccCCccccccccccc-CCCCcccc-eeEecCCCCCCCCccccceeeEEEEEEEecCCCccCCcc Q lcl|Aclame:pro 121 -----RFPKVTDATIATKGDGNHPTSSYRLG-IPAPTTAP-VCTVQQGGDVSDDNPNDDETRFYTETFVSDYGEEGPPGP 193 (567) Q Consensus 121 -----~~p~~t~~~iat~g~g~~p~~~y~Lg-VpaP~~ap-~~~v~~g~~~~g~~~~d~et~~Y~~TfVt~~GeES~pS~ 193 (567) |..+.....+.. .....-.. +.. .-+|+++- +.+++++.......+...-.+.|++..|+.+| ||+||. T Consensus 252 f~sa~G~i~L~~s~~m~--~~~~ld~~-~~~~~~apaapsvt~tv~~~~~g~f~~~~~~~~~~Ykv~~vn~~G-eS~ps~ 327 (464) T protein:vir:80 252 FNSARGFIRLHGSTVME--LEQILDEN-RMQLPNAPQKATVKATLEAGTKGKFRDEDLTIDTEYKVVVVSDDA-ESAPSD 327 (464) T ss_pred ccccccceeccCccccC--cccccccc-cccCCCCcCCceeEEEecCCcccCCccccccceeEEEEEEECCCC-ccccce Confidence 111111111100 00000000 001 11333222 22444443322222111223578888888888 889987 Q ss_pred cceeEEEecCCCEEEEccccCCCCCCccceEEEEEEEcCCCCeeEEEEEeccCc-----eeeEEeccCcc------ccCc Q lcl|Aclame:pro 194 ASLEVTLRTPGTAVQLTLAPVPLQNASIKRRRIYRSASGGGEADFLLVAELDAS-----VLSYTDKIPAK------NLGP 262 (567) Q Consensus 194 ~S~~v~v~~~g~~V~L~~~p~~~~~~~it~~RIYRs~tggg~~e~~lVael~~s-----t~sy~D~~~~~------~Lg~ 262 (567) + ..+++......|.|..-+.+.....-+.+.|||+... +++|++++.++.+ +.+|+|.-.-. -.++ T Consensus 328 ~-~~~ti~~~~~~V~l~it~~~~~~~~p~yv~IYR~~~~--~g~f~~i~rv~~~~~~~gt~t~vD~n~~IPgt~~vfVge 404 (464) T protein:vir:80 328 V-ASVVIDDKKKQVKLEITINNMYQARPQYVAIYRKGLE--TGLFYQIARVPASKAVEGVITFIDVNDEIPETADVFVGE 404 (464) T ss_pred e-eeeeecCcccEEEEEEEeCCccccccceEEEEeecCC--CCceeEEEEEeeccccCCceEEEecccccCCceeEeeec Confidence 4 4555666677788776664443333368999999764 4699999999544 45788843220 0111 Q ss_pred cc-chhhccCCCCCCceeeeecCcEEEEEECCEEEEecCCCcccCchhh-ceecccceEEEEE--eCC Q lcl|Aclame:pro 263 SL-ATWDYLPPPENMTGLCLMANGIAAGFAGNEVMFSEAYLPYAWPEVN-RHTTAEDIVAICP--LGT 326 (567) Q Consensus 263 ~L-~t~~~~~Pp~~~~~l~~~~NG~l~~a~Gn~l~FSEp~~Phawp~~y-~~~~~~~Iv~i~p--v~~ 326 (567) .- .+..|....+=+|.-.+.-|. ....-++||--+.. + -|+++ ++. .|+.+++ +++ T Consensus 405 ms~~ti~l~ellPm~rlplA~~n~---~~~waVl~YGaLal-~-aPk~~~~ik---Nv~~~~~~~~~~ 464 (464) T protein:vir:80 405 LTPSVVHLFELLPMMRLPLAQVNA---SVTFAVLWYGALAL-R-APKKWARIK---NVKYIATGNVFN 464 (464) T ss_pred CCchHHHHHHHHHhhhCCchhccc---chhhhhhhhhHHhh-h-ccccceEEE---EEEEeecccCCC Confidence 11 233332222222211122231 11233444442111 1 16664 332 3555544 222 No 28 >protein:vir:102644 Length: 594 # NCBI annotation: Hypothetical protein # Family: family:all:780 # MgeID: mge:1624 # MgeName: VP2 # Cross-refs: genbank:acc:YP_024422;genbank:gi:48696643;genbank:GeneID:2948111 Probab=95.86 E-value=0.0014 Score=36.31 Aligned_cols=436 Identities=10% Similarity=0.032 Sum_probs=179.4 Q ss_pred eeEEEeccccc-cc-CccchhcCc---ccccceEEeeee-cCCeEeEeecccccccccc-ccceEEEEE--CC--ceEEe Q lcl|Aclame:pro 27 MPYIDITTMRG-MM-PRVVTSMLP---EHSAVLAEDCHF-RFGVITPERQISGVEKTFT-IKPKTIFHY--RD--DFWFA 95 (567) Q Consensus 27 M~~I~i~~f~G-~~-pr~~p~lL~---~~~a~~A~N~~~-~~G~l~P~~~~~~v~~~~~-~~~~Tif~~--~~--~~w~~ 95 (567) |+-|.=..|.| |+ |++..|-=- .+.++.+.|.-+ -.|.++-+.+...++.... ...--|+-| .. .+=+. T Consensus 1 m~~~~~~~F~~GelsP~l~~r~Dl~~y~~~~~~~~n~~~~~~G~~~rR~G~~~~~~~~~~~~~~~lipF~~s~~~~~~le 80 (594) T protein:vir:10 1 MADFSQTSFKGGVIAPRLQFNEYESAYHHSIEDAVNFVVTEQGSLITRCGSEEVGLCQDGEVRLFRLPAVDAPSNDVIVE 80 (594) T ss_pred CceeeccccCcceecceeccchhHHHHHHHHhhhhceEEEecCCeecCChhHhhhhccCCCCCEEEEEEEeCCCCeEEEE Confidence 88888888864 42 333333211 567778888776 6777776666555554321 111233222 10 01111 Q ss_pred eCCeEEEeeCCCCCCCcceEEEcCCCeeeeeeccccccCCcccccccccccCCCCcccceeEecCCCCCCCCccccceee Q lcl|Aclame:pro 96 WPDVVDVIRSPIAQDPHGRIYYTDGRFPKVTDATIATKGDGNHPTSSYRLGIPAPTTAPVCTVQQGGDVSDDNPNDDETR 175 (567) Q Consensus 96 w~~~V~~~~spia~D~~~Rvy~tgd~~p~~t~~~iat~g~g~~p~~~y~LgVpaP~~ap~~~v~~g~~~~g~~~~d~et~ 175 (567) -++-+-|+|.-|. ......+.. -|.+. .|.. .+. .+. T Consensus 81 ------------~g~~~~r~~~~~~---------~~v~~~~~~---~~~~~--tp~~---~t~-~~~------------- 117 (594) T protein:vir:10 81 ------------VGNTNIAVWVNDV---------RQVVANTPS---EWRNT--IDRI---QTA-YDT------------- 117 (594) T ss_pred ------------EcCCeEEEEecCc---------EEEEccCCC---ccccc--ccce---eec-cCC------------- Confidence 1333334442221 000000000 01111 1110 000 000 Q ss_pred EEEEEEEecCCCccCCcccceeEEEecCCCEEEEccccCCCCCCccceEEEEEEEcCCCCeeEEEEEeccCceeeEEecc Q lcl|Aclame:pro 176 FYTETFVSDYGEEGPPGPASLEVTLRTPGTAVQLTLAPVPLQNASIKRRRIYRSASGGGEADFLLVAELDASVLSYTDKI 255 (567) Q Consensus 176 ~Y~~TfVt~~GeES~pS~~S~~v~v~~~g~~V~L~~~p~~~~~~~it~~RIYRs~tggg~~e~~lVael~~st~sy~D~~ 255 (567) ...+...+.++.+.+.-.. ..-.||||... +.|.+.+- +.....+.|. T Consensus 118 -------------------l~~i~~tqsad~~~~~~~~-------~~p~~L~R~~~----~~w~~~~~-~~~~~p~~~~- 165 (594) T protein:vir:10 118 -------------------IGDDAGAANTGRLIMVHPA-------LQPKRLYRDNN----NAWQFVNM-HTGAVPAEWS- 165 (594) T ss_pred -------------------ccceEEEEEeeEEEEEcCC-------CCceEEEEccC----CCceEEec-ccCccccccc- Confidence 0111222233334433222 22368998532 23443221 1111111110 Q ss_pred CccccCcccchhhccCCCCCCceeeeecCcEEEEEEC----CEEEEecCCCcccC-chh---------hceecccceEEE Q lcl|Aclame:pro 256 PAKNLGPSLATWDYLPPPENMTGLCLMANGIAAGFAG----NEVMFSEAYLPYAW-PEV---------NRHTTAEDIVAI 321 (567) Q Consensus 256 ~~~~Lg~~L~t~~~~~Pp~~~~~l~~~~NG~l~~a~G----n~l~FSEp~~Phaw-p~~---------y~~~~~~~Iv~i 321 (567) ..+ -| ..+.+++.||.-+.. +.||+|.+-.++-+ |.. +-..-+.++.-+ T Consensus 166 ----------~~~---~p----~~v~f~q~RL~f~~~~~~p~~v~~Srtgd~~nF~~~~~~~ddd~i~~~~s~~~~~~~~ 228 (594) T protein:vir:10 166 ----------PSN---YP----QTVGIFQNRVWYVGSPVHRTYFWATRAGKLEDIAPSTANNPNDPISFVGIMEGTPCWI 228 (594) T ss_pred ----------CCc---cc----eEEEEEeeeEEEEeCCCCCceEEEEecccccccccCCCCCCCccEEEEEecccceEEE Confidence 001 12 234588888876554 47999988887765 221 111112445555 Q ss_pred EEeCCeEEEEEcCcEEEEEcC-----CcccceeEeecccCCcccccceeecCceEEEecCCc-----EEEEc-CC----c Q lcl|Aclame:pro 322 CPLGTSLVVATKGEPYLFSGV-----SPSTISGSKIPSMQACLSRRSMVAMEGFVLYAGTNG-----LVSVD-AN----G 386 (567) Q Consensus 322 ~pv~~gl~V~T~~~py~lsG~-----~p~~m~~~~l~~~~pcvs~~siv~~~~~v~y~s~dG-----lv~~~-~~----G 386 (567) .+...+|+++|.+.-|.|+|. +|.+..+.+. ...+| +.--.+..++.++|++++| +..-. .+ . T Consensus 229 v~~~~~L~i~t~~~e~~l~~~~~~~lTp~~~~~~~~-s~~g~-~~~~P~~vg~~~~fv~~~g~~vre~~y~~~~d~y~~~ 306 (594) T protein:vir:10 229 IASSDVLTIGTTINDYQLAASTGVSVTAATAILRRS-SVQGT-AAVQGIPAEEQVIFCSRNKSKVYAMNYVREQDNWIPD 306 (594) T ss_pred EecCCceEEEecCceEEEecCCCcccccceEEEEEe-eeecc-CCCcceeeCCeEEEEcCCCCEEEEEEEeeccCceecc Confidence 667788999999999999884 5666656544 44577 3445578899999999998 21111 11 1 Q ss_pred eeEeecccccchhHHhhhcCcccEEEEEEc--CeEEEEEecCCCcceeEEEccCCceeEEEeeee-e------EEEEEec Q lcl|Aclame:pro 387 NVALATEQIVSPEQWQSQFNPASIVAYPWR--GEYIACYTKPDGKQDVFVFSPVNMDIRYLSTPF-D------CAWVDLA 457 (567) Q Consensus 387 ~~~~vt~~~~~~~~W~~~l~P~ti~a~~~~--G~Y~~~y~~~~g~~~~~ifd~~~~~~~~~~~~~-~------a~~~~~~ 457 (567) ...++-+.+|..-. .+....|+.+-|. -.-+.++...||.-.++-|+....-.-++...+ + |...... T Consensus 307 dlt~~a~hl~~~~~---~~~~~~i~~~a~~~~p~~~~~~v~~dG~l~~~ty~~eq~v~aWs~~~~t~G~v~~va~i~~~~ 383 (594) T protein:vir:10 307 EMSSQAQHLFTPIS---SAKGASVRRVAYISDAAKSLWVVLENGQINYCCFDRTTDTKAWTQLELSGGKVIDIAAAFNPD 383 (594) T ss_pred chhhhhhhhcCccc---cccCceEEEEEEecCCceEEEEEeCCCeEEEEEEecccceeeeEeeccCCCcEEEEEEeecCC Confidence 11233333432100 0112333333222 123333334455444455554432222222221 1 2222344 Q ss_pred CCeEEEEeCC--EE------E----EEcCCCCceeEEEEeeeEEcCCCCceeEEEEe-eCCcCceEEEEEECCeeeEeec Q lcl|Aclame:pro 458 KDMMRVVTGD--KM------S----VLAGGALPSTIRWHSKIFSLPERTSFSCIRVK-SPAPERVGITIMADDVPVIHFA 524 (567) Q Consensus 458 ~d~ly~~~g~--~i------~----~~~~g~~~~~~~WrSK~f~~~~~~~f~~~~V~-~~~~~~~~~~i~~d~~~~~~~~ 524 (567) .|+||++--+ .| | .++.... ......|.....++.. ..|- .+..+.-.+.+++||.... T Consensus 384 ~d~l~~~V~R~~ti~g~~~~y~~lE~~~~~~~----~~~~~~~~~d~~~~~~-~~vsgl~hLeg~tv~v~aDG~~~~--- 455 (594) T protein:vir:10 384 SDYAYVAVVRSKAINGVQKNYTVLEKISSPRT----DWKRADGWVVAQVNQN-GDVLNLDRYIGRTAVIFSKYGLEA--- 455 (594) T ss_pred CCEEEEEEEECCccccceeeEEEeecCCCccc----cccccceeeeeccccc-ceeecccccCCceEEEEeCCeecC--- Confidence 6788875321 11 1 1111100 0000111111111111 0111 1223344567788887542 Q ss_pred CcccCCcceEcCCc--c-cceE-------------EEEE--------EecceEEEEEee--cchh------hhcC Q lcl|Aclame:pro 525 PGTFKGSVVRLPAA--T-GQNW-------------QVMV--------SGFGQVERITLS--TSMS------EMPV 567 (567) Q Consensus 525 ~~~~~~~~~RLP~~--~-~~~w-------------qiei--------~g~~~V~~i~la--~s~~------EL~~ 567 (567) ..+.....+.||.. . +..- .+|+ -+..+|+++++. .|.. +.+. T Consensus 456 ~~~V~~g~itL~~~~~~~~~~v~VGl~Y~s~i~~lp~~~~~~~gs~~g~r~ri~r~~v~~~~S~g~~vg~~~~~~ 530 (594) T protein:vir:10 456 EVEVNNIGLTHRINGYDPNTVYYVGYKMDSYFRTLTPSNGDMKKSMFGSKIRISKVQLALFDSIEPTVNGEPADD 530 (594) T ss_pred CeEEcCCeeEeeccCCCCcceEEEeeeeeEEEEeecccccCCcccccCccEEEEEEEEEEEcceeeEECCccccc Confidence 22222334444421 0 1111 1111 112233333332 2211 0000 No 29 >protein:vir:3529 Length: 477 # NCBI annotation: P28 # Family: family:all:1540 # MgeID: mge:72 # MgeName: APSE-1 # Cross-refs: genbank:acc:NP_050989;genbank:gi:9633575;genbank:GeneID:1262322 Probab=95.84 E-value=0.0014 Score=36.28 Aligned_cols=398 Identities=11% Similarity=0.077 Sum_probs=183.7 Q ss_pred CcceEEEcCCCeeeeeeccccccCCcccccccccccCCCCcccceeEecCCCCCCCCccccceeeEEEEEE-EecCCCcc Q lcl|Aclame:pro 111 PHGRIYYTDGRFPKVTDATIATKGDGNHPTSSYRLGIPAPTTAPVCTVQQGGDVSDDNPNDDETRFYTETF-VSDYGEEG 189 (567) Q Consensus 111 ~~~Rvy~tgd~~p~~t~~~iat~g~g~~p~~~y~LgVpaP~~ap~~~v~~g~~~~g~~~~d~et~~Y~~Tf-Vt~~GeES 189 (567) -...|+..=. +| |-+. ........+. |.-.+ |+.+.+.. T Consensus 1 ~~~~~~m~~~--------~i-----------------pl~~--g~~~~~~~~d-------------~~~~~PVN~~a~p~ 40 (477) T protein:vir:35 1 MLSEVFMPKI--------QI-----------------PLAK--GLVKDIKTAD-------------YIDALPVNMLATPK 40 (477) T ss_pred Ccccceeeee--------cc-----------------cccc--cccccccccc-------------ceeeeeeccceeec Confidence 1111211100 00 0000 0000000000 00000 11111100 Q ss_pred CCcccceeEEEecCCCEEEEccccCCCCCC--ccceEEEEEEEcCCCCeeEE---EEEeccCcee-eEEeccCcccc--- Q lcl|Aclame:pro 190 PPGPASLEVTLRTPGTAVQLTLAPVPLQNA--SIKRRRIYRSASGGGEADFL---LVAELDASVL-SYTDKIPAKNL--- 260 (567) Q Consensus 190 ~pS~~S~~v~v~~~g~~V~L~~~p~~~~~~--~it~~RIYRs~tggg~~e~~---lVael~~st~-sy~D~~~~~~L--- 260 (567) ...-.+..+ ...+|-.....+ +-+.-|- ++..-.+||.. |++-|+ -|++++.+.. ++.|+...-.. T Consensus 41 ~~~~s~~~L-~~~pG~~~~~~~-~G~~RG~~~~~~~g~lY~V~---G~~LY~v~~~vG~I~gsg~VsMa~n~~~~aIv~~ 115 (477) T protein:vir:35 41 EVLNASGYL-RSFPGIEKKQDA-KGVSRGVHFNTKNNALYRVC---GNTLYRNDKEVADIAGMSRVSMSHSSHSQAICFE 115 (477) T ss_pred ccccccccc-ccCCcceeeccC-CccccceeEeecCCeEEEEe---cCeeEeeeeeeeeecccccEEEeeCCcEEEEEEC Confidence 000000000 111232221111 1111010 11123344321 112222 1333332211 33333211000 Q ss_pred Ccc------cchhhccCCC-------CC--CceeeeecCcEEE-EEEC-CEEEEecCCCcccCchhh--c---eecccce Q lcl|Aclame:pro 261 GPS------LATWDYLPPP-------EN--MTGLCLMANGIAA-GFAG-NEVMFSEAYLPYAWPEVN--R---HTTAEDI 318 (567) Q Consensus 261 g~~------L~t~~~~~Pp-------~~--~~~l~~~~NG~l~-~a~G-n~l~FSEp~~Phawp~~y--~---~~~~~~I 318 (567) |.. .++.....+| +. .+.+| +-.|++. .-.| +...+|.-.-+=. +.+| | ---|+.| T Consensus 116 g~~~gy~y~~t~~~~~~~~~~~~p~~~l~~~~~v~-f~dGyfV~~~~gt~~~~iS~L~d~s~-~d~~~~FasAE~~pD~I 193 (477) T protein:vir:35 116 GKVKLYRYDGTEKALSNWPKDKYPQYDLGEVIDVC-RNRGRYIWLQKGGERFGVTDLEDESK-PDRYQPFYRAESQPDGI 193 (477) T ss_pred CcceeEEEecccceeeecCccccCCccccceeEEE-eeCceEEEeecCCCeEEEeecCCccc-cccccccccccCCCCce Confidence 000 0111111121 11 22344 4467743 3344 4455573222222 2222 2 2246999 Q ss_pred EEEEEeCCeEEEEEcCcE--EEEEcCCcccceeEeec----ccCCcccccceeecCceEEEecCC----cEEEEcCCcee Q lcl|Aclame:pro 319 VAICPLGTSLVVATKGEP--YLFSGVSPSTISGSKIP----SMQACLSRRSMVAMEGFVLYAGTN----GLVSVDANGNV 388 (567) Q Consensus 319 v~i~pv~~gl~V~T~~~p--y~lsG~~p~~m~~~~l~----~~~pcvs~~siv~~~~~v~y~s~d----Glv~~~~~G~~ 388 (567) ++|...-+-||+.-+... |..+|..+-...++|.. .+-+|.++.|+..+++.++|+|++ |.|-...++++ T Consensus 194 vgi~~~~~~i~lfG~~TiEvw~ntG~a~f~~p~~r~~~~~mIq~Gcaa~~sv~~~~~t~~~l~~d~~g~~~V~~~~g~q~ 273 (477) T protein:vir:35 194 VSVDAWRDLIVCFGSSSIEYFTLTGSADTSQPLYIHQAAYMIQAGIAGRDCKCRYQDKYAILSHQSTGQPAVYLIGAGEK 273 (477) T ss_pred EEEEeeccEEEEEeccceEEEEecCCCCCCcceeecCCceeeeecccCchhhhhhCceEEEEecCCCcccEEEEccCcee Confidence 999999999999877766 99999998877777775 577999999999999999999998 55777778888 Q ss_pred EeecccccchhHHhhhcCcccEE----EEEEcCe--EEEEEecCCCcceeEEEccCCc---eeEEEe------eeeeEEE Q lcl|Aclame:pro 389 ALATEQIVSPEQWQSQFNPASIV----AYPWRGE--YIACYTKPDGKQDVFVFSPVNM---DIRYLS------TPFDCAW 453 (567) Q Consensus 389 ~~vt~~~~~~~~W~~~l~P~ti~----a~~~~G~--Y~~~y~~~~g~~~~~ifd~~~~---~~~~~~------~~~~a~~ 453 (567) +.|+--=++ +.|++-=.++... ..+.||. |+..+- + .-+.||...+ .-+..+ -++-+.. T Consensus 274 ~rIST~aIE-~~i~ay~~~e~a~af~~t~~~eGH~fy~LtfP--~---~Tw~yD~at~~w~e~W~~~~~g~~~~~~Ra~~ 347 (477) T protein:vir:35 274 NKISTATID-KIIRYYSADELAASFMESIRFDNHELLLLHLP--K---HTLCFDGSASHQYSQWSLLKSGFYDEPYRAID 347 (477) T ss_pred EEecCHHHH-HHHHhcCCcchhceeEEEEEeCCeeEEEEEcC--C---ceEEEecccccccceeeeeccCCccCceEEEE Confidence 888544444 7787644577755 4457798 777763 2 3577786442 112221 1232333 Q ss_pred EEecCCeEEEEe--CCEEEEEcC-----CCCceeEEEEeeeEEcCCCCceeEEEEeeC-----CcCceEEEEEECCeeeE Q lcl|Aclame:pro 454 VDLAKDMMRVVT--GDKMSVLAG-----GALPSTIRWHSKIFSLPERTSFSCIRVKSP-----APERVGITIMADDVPVI 521 (567) Q Consensus 454 ~~~~~d~ly~~~--g~~i~~~~~-----g~~~~~~~WrSK~f~~~~~~~f~~~~V~~~-----~~~~~~~~i~~d~~~~~ 521 (567) +-...++.++.. ++.||+++. .+.+.+-+--++.|..+..--|- ..++.. ...++-++-=-||... T Consensus 348 ~~~~~g~~~vGD~~ng~l~~ld~~~~~d~g~~i~~~~~~p~~~~d~~Rv~~-~el~~~tGvgq~~d~v~L~~sddG~~~- 425 (477) T protein:vir:35 348 FMFFDNQITVGDKKEGVLGHLIFNASNQYEQQTEHLLYTPMIKADNARLFD-FELEASTGVAQIADKLFLSVTTDGINY- 425 (477) T ss_pred EEEeCCeEEEEEcCCCeEEEECCCCcccCCCccceEEecceeeCCCCeEEE-EEEEEecCcCccCceEEEEEecccccc- Confidence 334468888864 568999863 33555555557888776554343 444322 2233333333343322 Q ss_pred eecCcccCCcc---------eEcCCcccce-EEEEEEecceEEEEEeecchh Q lcl|Aclame:pro 522 HFAPGTFKGSV---------VRLPAATGQN-WQVMVSGFGQVERITLSTSMS 563 (567) Q Consensus 522 ~~~~~~~~~~~---------~RLP~~~~~~-wqiei~g~~~V~~i~la~s~~ 563 (567) .-..-..-+++ .||=..|.|- ..|+++-..+|..--+.--|| T Consensus 426 ~~~~~~~~g~~g~~~~r~~~~RlG~~r~~vgf~~r~~~~~pv~l~~~~~~~e 477 (477) T protein:vir:35 426 SREQLIEQNSPFQYDKRILWRRIGRVRKNIGFKIRIITKSPVTLSDLSIRME 477 (477) T ss_pred ccceeecCCCccccccceeeeeeeeceeccceEEEEEecCCceeccceeEeC Confidence 11111111111 1332222222 667777777766555555555 No 30 >protein:vir:103790 Length: 768 # NCBI annotation: hypothetical protein # Family: family:all:780 # MgeID: mge:1645 # MgeName: BcepC6B # Cross-refs: genbank:acc:YP_024932;genbank:gi:48697202;genbank:GeneID:2846114 Probab=95.72 E-value=0.0016 Score=35.97 Aligned_cols=518 Identities=14% Similarity=0.114 Sum_probs=203.8 Q ss_pred eeEEE--ecccccccCccchhcCc-------ccccceEEeeee-cCCeEeEeecccccccccc-ccceEEEEE---CCce Q lcl|Aclame:pro 27 MPYID--ITTMRGMMPRVVTSMLP-------EHSAVLAEDCHF-RFGVITPERQISGVEKTFT-IKPKTIFHY---RDDF 92 (567) Q Consensus 27 M~~I~--i~~f~G~~pr~~p~lL~-------~~~a~~A~N~~~-~~G~l~P~~~~~~v~~~~~-~~~~Tif~~---~~~~ 92 (567) |+-|. ++.|+|=. |.|+|.- .+++..+.|+-. ..|.|+-+.+-..++.... ....-|++| .++. T Consensus 1 M~~~~~~~~~F~~Ge--lsP~l~~r~Dl~ry~~~~~~~~N~~~~~~gGl~rRpGt~fv~~~~~~~~~~~lipf~~~~~~~ 78 (768) T protein:vir:10 1 MPKAAPQQVSFDAGE--LSPLLGARVDLAKYPNGCQVMENFIATVQGPAIRRGGKRFVAATKDSTKQSWLLPFIVADGIA 78 (768) T ss_pred CCcceeeeeeccCce--echhhcccchHHHHHHHHhhhhcceeeecCCceecCchhhhhhhcCCCCCeeEEEEEecCccE Confidence 87544 56776532 5555554 678999999987 7788888877777765432 222334433 2233 Q ss_pred EEe---------eCCeEE--------EeeCCCCCCC---------------cceEEEcCCCeeeeee----------ccc Q lcl|Aclame:pro 93 WFA---------WPDVVD--------VIRSPIAQDP---------------HGRIYYTDGRFPKVTD----------ATI 130 (567) Q Consensus 93 w~~---------w~~~V~--------~~~spia~D~---------------~~Rvy~tgd~~p~~t~----------~~i 130 (567) |+. |...-. -+.+|-..+. ...+|++.-.+|...- ..+ T Consensus 79 y~l~fg~~~irv~~~~g~v~~~~~~~e~~tp~~~~~l~~~~~~~~L~~~q~aD~~~i~~~~~~p~~l~r~~~~~w~l~~~ 158 (768) T protein:vir:10 79 YMLEFGDHYIRFFVNRGQLVNAGAPVEIATPYALADLTTEDGTFAIRATQSADTMYLFHGGYPTQKLLRTSATTFSLQPV 158 (768) T ss_pred EEEEEcCCEEEEEECCcEEEecCeeEEEEcCCCcceeecccccceeEEEeecCEEEEEcCCcceeEEEEecCCCceeEEe Confidence 332 222111 1223321110 1256666544443221 111 Q ss_pred cccCCccccc----ccccccCCCCcccceeEecCCCCCCCCccccceeeEEE------------EEEEecCCCccCCccc Q lcl|Aclame:pro 131 ATKGDGNHPT----SSYRLGIPAPTTAPVCTVQQGGDVSDDNPNDDETRFYT------------ETFVSDYGEEGPPGPA 194 (567) Q Consensus 131 at~g~g~~p~----~~y~LgVpaP~~ap~~~v~~g~~~~g~~~~d~et~~Y~------------~TfVt~~GeES~pS~~ 194 (567) ...+ +.+.. ..+.+..++-+.. .++...+..... .......|. ..+.......+.+.. T Consensus 159 ~~~~-gp~~~~n~~~~vti~~s~~~~~--~T~tasa~~~~~--~~v~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~- 232 (768) T protein:vir:10 159 TFVG-GPFAAVNSDNNVRVHASAGTGA--VTLVASASVFRP--SDVGTLFYLEQEDNSFVKPWVVHQKIGPSELRRVGD- 232 (768) T ss_pred eecC-ccccccccceeEEEEeccccee--EEEeecCCccch--hhcceeeeeeeeccccccccEEEEeeeeEEEEecCC- Confidence 1111 10000 0001111111110 111110000000 000000000 000000000000000 Q ss_pred ceeEEEecCCCEEEEccccCCCCCCccceEEEEEEEcCCC--------CeeEE---------EEEeccCcee-eE----- Q lcl|Aclame:pro 195 SLEVTLRTPGTAVQLTLAPVPLQNASIKRRRIYRSASGGG--------EADFL---------LVAELDASVL-SY----- 251 (567) Q Consensus 195 S~~v~v~~~g~~V~L~~~p~~~~~~~it~~RIYRs~tggg--------~~e~~---------lVael~~st~-sy----- 251 (567) ...+.+..++...+.++.-.+.. ..+-+.|.+..... +..+. .+.+....+. .. T Consensus 233 ~~~~~~~~~~~~~~~~~t~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~t~~~~~~~~~ 309 (768) T protein:vir:10 233 RVYLCTAVGTATPQVTGTETPTH---TSGSRWDGTGQDESATDEYGSIGAEWEYQHSGYGTVLITGYTNDQVVTGTVATN 309 (768) T ss_pred ceEEeeeeccccccccceecccc---ccCceEEEecCcccccccccccceEEEEEEcCCceEEEEEecCCeeEEeeeeee Confidence 00111111111111111100110 01111222111000 00011 1111111100 00 Q ss_pred --EeccC-ccccCcccchhhccCCCCCCc----eeeeecCcEEEEEECCEEEEecCCCcccC-chh-------hc--eec Q lcl|Aclame:pro 252 --TDKIP-AKNLGPSLATWDYLPPPENMT----GLCLMANGIAAGFAGNEVMFSEAYLPYAW-PEV-------NR--HTT 314 (567) Q Consensus 252 --~D~~~-~~~Lg~~L~t~~~~~Pp~~~~----~l~~~~NG~l~~a~Gn~l~FSEp~~Phaw-p~~-------y~--~~~ 314 (567) +|... ...++..-.++.|...+.+.. ..+.++++||.-+-++.||+|.+-.++-| +.. .- +++ T Consensus 310 ~~~~~~~~~~~~~~~~~t~~~~~~~~~~~~g~Ps~v~f~q~RL~f~~~~~v~~Srtgd~~nF~~~s~~~~~DdD~I~~~~ 389 (768) T protein:vir:10 310 DPADPGMLPNTVVTLTGTYKWARSLFNSTDGFPQMGTFWRNRLCLMRDRWLAMSVSADFETFKTKDADQQTDDSAIVQQL 389 (768) T ss_pred cCcccccccccccccCCCcccccCCCcCCCCCceEEEEEeeeEEEeeCCEEEEEcccccccccccccccccCCccEEEEe Confidence 00000 011222223444444433321 13458899999999999999999888887 221 11 221 Q ss_pred c----cceEEEEEeCCeEEEEEcCcEEEEEc------CCcccceeEeecccCCcccccceeecCceEEEecCCcEEE--- Q lcl|Aclame:pro 315 A----EDIVAICPLGTSLVVATKGEPYLFSG------VSPSTISGSKIPSMQACLSRRSMVAMEGFVLYAGTNGLVS--- 381 (567) Q Consensus 315 ~----~~Iv~i~pv~~gl~V~T~~~py~lsG------~~p~~m~~~~l~~~~pcvs~~siv~~~~~v~y~s~dGlv~--- 381 (567) . ..|.-+.+++ .|+|+|.+.-|.|+| .+|.+..+.+. ....|- .-..+..++.++|++++|=.+ T Consensus 390 ss~~~~~i~~~v~~~-~L~i~T~~~q~~l~~~~~~~~lTP~~~~i~~~-s~~g~~-~~~Pv~vG~~v~fv~~~g~~vre~ 466 (768) T protein:vir:10 390 NARQLNKLAWMVESD-SLLIGMTGDEWVIGPANASQPVSAANLNAARR-TSYGSK-RIQPVQVGGTIMFVQKAGRKLRDF 466 (768) T ss_pred cCCcceeEEEEeecC-cEEEEecCceEEEecCCCCcccccceEEEEEe-ehhccc-ccccEEeCCeEEEEcCCCCEEEEE Confidence 1 4577888985 799999999999987 47888766654 556784 345678899999999999221 Q ss_pred --EcCCce--eEeec---ccccchhHHhhhcCcccEEEEEEcC--eEEEEEecCCCcceeEEEccCC--cee-EEEeeee Q lcl|Aclame:pro 382 --VDANGN--VALAT---EQIVSPEQWQSQFNPASIVAYPWRG--EYIACYTKPDGKQDVFVFSPVN--MDI-RYLSTPF 449 (567) Q Consensus 382 --~~~~G~--~~~vt---~~~~~~~~W~~~l~P~ti~a~~~~G--~Y~~~y~~~~g~~~~~ifd~~~--~~~-~~~~~~~ 449 (567) -...++ +.-+| +.+|....+ .++.|+++-+.. .=+.++...+|.--+|-|+..+ +.+ -++...+ T Consensus 467 ~y~~~~d~y~a~DlT~~a~hl~~~~~~----~~~~i~~~a~~~~p~~v~~~v~~dg~l~~~ty~~e~~~q~v~aW~~~~~ 542 (768) T protein:vir:10 467 KYDFSSDNYVSTDVTKIADHITRGRAG----TNSGIMSLCFQQEPHSVVWAARADGQLIGCTYDEEAGRSDVYGWHRHPD 542 (768) T ss_pred EeeeecCceecchhhhhhhhhccccCc----cccceeeEEEeecCCeEEEEEecCCeEEEEEEecCCCceeEEeEEEEEc Confidence 111111 11222 334332111 123343333322 2233333344544455555542 221 2222222 Q ss_pred -eE------EEE--EecCCeEEEEeCC----E---EEEEcCCCCceeEEEEeeeEEcCCCCceeEEEEe---e-CCcCce Q lcl|Aclame:pro 450 -DC------AWV--DLAKDMMRVVTGD----K---MSVLAGGALPSTIRWHSKIFSLPERTSFSCIRVK---S-PAPERV 509 (567) Q Consensus 450 -~a------~~~--~~~~d~ly~~~g~----~---i~~~~~g~~~~~~~WrSK~f~~~~~~~f~~~~V~---~-~~~~~~ 509 (567) +- ... +-..|.||++--+ . .-|.... ......-....|.+...+.+....+. + +..+.- T Consensus 543 ~~g~v~~v~~i~~~~g~~d~l~~~v~r~~~g~~~~~ie~l~~-~~~~~~~~~~~~~~D~~~~~~~~~~~~~~gl~~leg~ 621 (768) T protein:vir:10 543 ANGFVECVASMPAPDGASDDLWVIVRRQVNGQTVRYVEYLNP-ALQDDEPQSSAFYVDAGITYNGVPTSTIAGLGHLEGV 621 (768) T ss_pred CCCEEEEEEEEecCCCCccEEEEEEEecCCCeEEEEEEecCc-ccccccccccceEeccccccCCcceeeecCCCCcccc Confidence 11 111 1125889886432 1 1111111 11122222344555444433222221 1 112334 Q ss_pred EEEEEECCeeeEeecCcccCCcceEcCCc-----ccceEEEE---------------EEecceEEEEEee--cchhhhcC Q lcl|Aclame:pro 510 GITIMADDVPVIHFAPGTFKGSVVRLPAA-----TGQNWQVM---------------VSGFGQVERITLS--TSMSEMPV 567 (567) Q Consensus 510 ~~~i~~d~~~~~~~~~~~~~~~~~RLP~~-----~~~~wqie---------------i~g~~~V~~i~la--~s~~EL~~ 567 (567) .+.+++||.... .....+..+.||.- -+...+-| ..+..+|.++.+. .|.. +-| T Consensus 622 ~v~v~~dG~~~~---~~~v~~g~itl~~~~~~v~vG~~y~s~~~~~p~~~~~~~gs~~~~~~ri~r~~v~~~~S~~-~~~ 697 (768) T protein:vir:10 622 TVAVLTDGAVHP---SRTVTAGAITLDWSASIVHIGVPTTCRIQTMQLNAGAANGTAQGKTKRVTNIATRFSRSLG-GVV 697 (768) T ss_pred eEEEEECCEecc---CceecCCEEEeCCCCceEEEeEeeeEEEEecceEeecCCccccccceEEEEEEEEEecccc-eEE Confidence 566788886542 11112223333320 01111111 1234444444443 3322 222 No 31 >protein:vir:100851 Length: 514 # NCBI annotation: hypothetical protein # Family: family:all:2450 # MgeID: mge:1633 # MgeName: LP65 # Cross-refs: genbank:acc:YP_164744;genbank:gi:56693157;genbank:GeneID:3197484 Probab=95.48 E-value=0.0012 Score=36.69 Aligned_cols=233 Identities=19% Similarity=0.281 Sum_probs=87.9 Q ss_pred CccceeehhhhccceeeccccccceeeeEEEecccccccCccchhcCcccccceEEeee-ecCCeEeEeecccccccccc Q lcl|Aclame:pro 1 MMPIAILANSIINPLIFKPEAVKGISMPYIDITTMRGMMPRVVTSMLPEHSAVLAEDCH-FRFGVITPERQISGVEKTFT 79 (567) Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~M~~I~i~~f~G~~pr~~p~lL~~~~a~~A~N~~-~~~G~l~P~~~~~~v~~~~~ 79 (567) +||+.+-++ +.-++||..-..+.-|.+ +..| .+++. T Consensus 237 ylp~~vka~--------------------------------f~~~~~~~qRV~~~~n~~~~~~G--------~~v~~--- 273 (514) T protein:vir:10 237 YMPIGIKAD--------------------------------FVNQHLNGQRVMLPGQTGGMTTG--------LDIDK--- 273 (514) T ss_pred eCchHHHHH--------------------------------HhhcccCcceEEeecCccceeee--------eeccc--- Confidence 666655442 222222222221111110 0111 11111 Q ss_pred ccceEEEEECCceEEeeCCeEEEeeCCCCCCCcceEEEcCCCeeeeeeccccccCCcccccccccccCCCCcccc-eeEe Q lcl|Aclame:pro 80 IKPKTIFHYRDDFWFAWPDVVDVIRSPIAQDPHGRIYYTDGRFPKVTDATIATKGDGNHPTSSYRLGIPAPTTAP-VCTV 158 (567) Q Consensus 80 ~~~~Tif~~~~~~w~~w~~~V~~~~spia~D~~~Rvy~tgd~~p~~t~~~iat~g~g~~p~~~y~LgVpaP~~ap-~~~v 158 (567) +....|. ++.=+|=|- |- .+.+.. + -+.+--||.++- .+++ T Consensus 274 -----f~s~~G~--------I~L~gs~im----------~~------~n~L~~--~-------~~~~~~Ap~~~~va~sv 315 (514) T protein:vir:10 274 -----FLSAHGS--------IRIQGSTIM----------DS------DNKLDF--D-------RPVSPTAPTAPQLSATV 315 (514) T ss_pred -----eeEeccc--------eeecCCeee----------cc------cccCcc--C-------CccCCcCCCCCcceEEE Confidence 1111111 000000000 00 000000 0 000011222111 1122 Q ss_pred cCC--CCCCCCcc----------ccc-eeeEEEEEEEecCCCccCCcccceeEEEecCCCEEEEccccCCCCCCccceEE Q lcl|Aclame:pro 159 QQG--GDVSDDNP----------NDD-ETRFYTETFVSDYGEEGPPGPASLEVTLRTPGTAVQLTLAPVPLQNASIKRRR 225 (567) Q Consensus 159 ~~g--~~~~g~~~----------~d~-et~~Y~~TfVt~~GeES~pS~~S~~v~v~~~g~~V~L~~~p~~~~~~~it~~R 225 (567) ... ++--+... .+. -.+.|++..++.+|++ +||.+ ...++...++.|+|+.-|.+-+...-+.+. T Consensus 316 T~~~~g~~~~ad~t~~~g~~~~~~~~g~~~sYaVv~~n~~GeS-~ps~~-vtaT~a~~~~~i~ltItp~~~~~~~p~yv~ 393 (514) T protein:vir:10 316 TPDGGGLWHEADKTDSKGEVILNKEVGVEQSYVAVMVSRHGDS-RPSLV-QTATPTKKDDAITLTITPNAMQNVIPDYVA 393 (514) T ss_pred ecCcccccCcccccccccccccccccceeEEEEEEEECCCCcc-cccce-eeeeeeccCceEEEEEEeccCcccccceEE Confidence 111 11000000 011 1356999999888855 78875 344555667889999887666655558899 Q ss_pred EEEEEc------------CCCCeeEEEEEecc-----CceeeEEeccCc------cccCc----ccchhhccCCCCCCce Q lcl|Aclame:pro 226 IYRSAS------------GGGEADFLLVAELD-----ASVLSYTDKIPA------KNLGP----SLATWDYLPPPENMTG 278 (567) Q Consensus 226 IYRs~t------------ggg~~e~~lVael~-----~st~sy~D~~~~------~~Lg~----~L~t~~~~~Pp~~~~~ 278 (567) |||+.. .+..++|+++++++ .++++|+|.-.- .-.|+ +..-.+|.|+ +|. T Consensus 394 IYR~~~~~s~~~~~~~~~~~~tGdf~li~rv~~~~~~~gttt~~D~n~~IPgT~~vfVgemspevi~l~ellPm---~kl 470 (514) T protein:vir:10 394 IYRKSNFDSDALEANTDASGNRGSYYLIGKVAVREQEGATITFVDTNARIAGCGDVFVIENRPETVALQEFIPL---SKL 470 (514) T ss_pred EEeccCCCcchhhhhccccccccceeEEEEEeeecCCCCeEEEeccccccCCcceeEEeeCchHHHHHHHHhhh---hhc Confidence 999831 22446899998776 577889885321 11121 1112223332 221 Q ss_pred eeeecCcEEEEEECCEEEEecCCCcccCchhh-ceec--ccceEEEEEe Q lcl|Aclame:pro 279 LCLMANGIAAGFAGNEVMFSEAYLPYAWPEVN-RHTT--AEDIVAICPL 324 (567) Q Consensus 279 l~~~~NG~l~~a~Gn~l~FSEp~~Phawp~~y-~~~~--~~~Iv~i~pv 324 (567) -.+.-|-. . ..-++||--+.. + -|+++ ++.. +.+|--++.. T Consensus 471 pLA~~na~-~--~waVlwYGaLal-~-aPkr~~~IkNv~~~~v~~~~~~ 514 (514) T protein:vir:10 471 NLAVTTTA-T--SFVVLNYVALAL-Y-YPKRGAVLENVVYSRVEDLELS 514 (514) T ss_pred Chhhhcch-H--HHHHHHHhHHHh-h-ccccceEEEeeeeeeccccccC Confidence 11222211 1 122333321111 0 14543 2211 1122222222 No 32 >protein:vir:105525 Length: 472 # NCBI annotation: phage DNA stabilization protein # Family: family:all:1540 # MgeID: mge:1463 # MgeName: phiSG1 # Cross-refs: genbank:acc:YP_516194;genbank:gi:89885997;genbank:GeneID:3964385 Probab=95.44 E-value=0.0021 Score=35.31 Aligned_cols=389 Identities=12% Similarity=0.140 Sum_probs=192.4 Q ss_pred CCCCcccceeEecCCCCCCCCccccceeeEEEEEE-EecCCCccCCcc--cceeEEEecCCCEEEEccccCCCCCC--cc Q lcl|Aclame:pro 147 IPAPTTAPVCTVQQGGDVSDDNPNDDETRFYTETF-VSDYGEEGPPGP--ASLEVTLRTPGTAVQLTLAPVPLQNA--SI 221 (567) Q Consensus 147 VpaP~~ap~~~v~~g~~~~g~~~~d~et~~Y~~Tf-Vt~~GeES~pS~--~S~~v~v~~~g~~V~L~~~p~~~~~~--~i 221 (567) +|.-. -|+ +.+-+.... +..|.-.+ |+-+=+ |.+ -+....-..+|- ..+..++.+..|. +. T Consensus 1 m~~~q-~pl--~~g~~~~~~-------~~~~~~~lpvN~y~~---p~~~~~ss~~lr~~PG~-~~~~~~~g~~RG~~~~~ 66 (472) T protein:vir:10 1 MAIMQ-LPL--LRGLGKARD-------DADYIDALPVNMLAT---PKPVLNASGYLRSFPGI-THKAEVAGVSRGVQYNT 66 (472) T ss_pred CCcee-eec--ccccccCcc-------ccCceeeeeeeeeec---cccccccceeecccCCc-eeecCCCcccceeEeee Confidence 11100 011 111000000 01121112 222110 111 011111123453 4444443332222 23 Q ss_pred ceEEEEEEEcCCCCeeEEE---EEeccCcee-eEEeccCcccc------------CcccchhhccCCC-------CCCce Q lcl|Aclame:pro 222 KRRRIYRSASGGGEADFLL---VAELDASVL-SYTDKIPAKNL------------GPSLATWDYLPPP-------ENMTG 278 (567) Q Consensus 222 t~~RIYRs~tggg~~e~~l---Vael~~st~-sy~D~~~~~~L------------g~~L~t~~~~~Pp-------~~~~~ 278 (567) ..-++||..-+ +.|+- +++++.+.. +..|+.-...+ +.++.-.+|..+. .+.+. T Consensus 67 ~~~~lY~V~G~---~Ly~v~~~vG~iagsg~VsMa~~~~~q~v~v~g~~~~y~y~g~~~t~~~~~~~~~it~~dl~~~~~ 143 (472) T protein:vir:10 67 HEKTVYRGLGN---QLYKGHKPIADLAGKGRISMAFSRNSQAVVAAGKMTLYRYDGTVKTLENWPKEKKYTQYDIGNVRD 143 (472) T ss_pred eCCeEEEEecc---eEEEEEeeeeeecccccEEEEecCCceEEEEecceeEEEeccchhhhhhccccccCCccccCCcee Confidence 34456653211 22221 222322211 33343321100 1122212211111 12334 Q ss_pred eeeecCcEEE-EEECCEEEEecCCCcccCchhh--ce---ecccceEEEEEeCCeEEEEEcCcE--EEEEcCCcccceeE Q lcl|Aclame:pro 279 LCLMANGIAA-GFAGNEVMFSEAYLPYAWPEVN--RH---TTAEDIVAICPLGTSLVVATKGEP--YLFSGVSPSTISGS 350 (567) Q Consensus 279 l~~~~NG~l~-~a~Gn~l~FSEp~~Phawp~~y--~~---~~~~~Iv~i~pv~~gl~V~T~~~p--y~lsG~~p~~m~~~ 350 (567) ++ +-.|++. .-.|..-||=-.+..-..|.+| |- --|+.|++|...-+-||+.-+... |..+|..+- .++ T Consensus 144 v~-~~dGyfV~~~~gt~~~~iS~L~d~s~~~~~~~FatAE~~pD~Ivgi~~~~~~i~lfG~~TiEvw~ntG~a~f--pf~ 220 (472) T protein:vir:10 144 MC-HLRGRYVWCKDGSDIFGVTDLEDESHPDRYRALYRAESQPDGIIGIDSWRDFIVCFGASTIEYFSLTGAADG--QSA 220 (472) T ss_pred EE-EeCceEEEeecCCceEEEeecCCcccCCcccceeeecCCCCceEEEEeeccEEEEEeccceEEEEecCCCCc--cee Confidence 55 3467753 4455554533333333344444 22 345999999999999999877766 999999874 455 Q ss_pred ee---c---ccCCcccccceeecCceEEEecCC----cEEEEcCCceeEeecccccchhHHhhhcC-ccc----EEEEEE Q lcl|Aclame:pro 351 KI---P---SMQACLSRRSMVAMEGFVLYAGTN----GLVSVDANGNVALATEQIVSPEQWQSQFN-PAS----IVAYPW 415 (567) Q Consensus 351 ~l---~---~~~pcvs~~siv~~~~~v~y~s~d----Glv~~~~~G~~~~vt~~~~~~~~W~~~l~-P~t----i~a~~~ 415 (567) +. + .+-+|.++.|+..+++.++|+|++ |.|-...+++++.|+--=++ ++|++ .+ |+. +...+. T Consensus 221 r~~~~pg~~iq~Gcaa~~sv~~~~~s~~~l~~d~~g~~~V~~~~g~q~~rIST~aIE-~~i~~-y~~~e~~dA~~~s~~~ 298 (472) T protein:vir:10 221 IYAAQPALMVEKGIAGTHCKTRLGDAHVIISHQATGAPSVFLINQAQATSIATATIE-KILRS-YTHDELASAVMETVRF 298 (472) T ss_pred eeccCccceeeecccCchhhhhhCceEEEEecCCCcceEEEEccCceEEEecCHHHH-HHHHh-CCcccccceeEEEEEe Confidence 43 2 345799999999999999999999 67777778888888554444 78876 55 663 345567 Q ss_pred cCe--EEEEEecCCCcceeEEEccCCce---eEEEe-e-----eeeEEEEEecCCeEEEEe--CCEEEEEcC-----CCC Q lcl|Aclame:pro 416 RGE--YIACYTKPDGKQDVFVFSPVNMD---IRYLS-T-----PFDCAWVDLAKDMMRVVT--GDKMSVLAG-----GAL 477 (567) Q Consensus 416 ~G~--Y~~~y~~~~g~~~~~ifd~~~~~---~~~~~-~-----~~~a~~~~~~~d~ly~~~--g~~i~~~~~-----g~~ 477 (567) ||. |+..+- + .-+.||...+. -+++. . ++-+..+-...+++++.. ++.||+++- +.. T Consensus 299 eGH~fy~LtfP--~---~Tw~yD~at~~~~~~w~~~~~g~~~~~~Ra~~~~~~~g~~~vGD~~ng~l~~ld~~~~td~g~ 373 (472) T protein:vir:10 299 DSHELVLIHLS--R---QVLCYDAAANQNGLQWSLLKTGFYHAPYRGIDFMFADHHLTCGDKNDSLLGQLDFASSAQYEK 373 (472) T ss_pred CCeEEEEEEcC--C---eeEEEeccCCccceeeeeeecCCccCceEEEEEEEeCCeEEEEEcCCCeEEEEcCcCcCCCCc Confidence 898 777763 3 35888875431 11111 1 122333334467777764 567999864 335 Q ss_pred ceeEEEEeeeEEcCCCCceeEEEEee-CCc----CceEEEEEECCeeeE------eecCcccCCcc--eEcCCcccce-E Q lcl|Aclame:pro 478 PSTIRWHSKIFSLPERTSFSCIRVKS-PAP----ERVGITIMADDVPVI------HFAPGTFKGSV--VRLPAATGQN-W 543 (567) Q Consensus 478 ~~~~~WrSK~f~~~~~~~f~~~~V~~-~~~----~~~~~~i~~d~~~~~------~~~~~~~~~~~--~RLP~~~~~~-w 543 (567) |..-+--++.|..+..--|. +.++. ... .++-++-=-||..-- ...++..+.|. .||=..|.+- . T Consensus 374 pi~~~~~tp~~~~~n~Rvfd-~el~~~tGvg~~~~~v~L~wSddg~~~~~~~~~~~~g~~~~~~r~~w~RlG~ar~~vgf 452 (472) T protein:vir:10 374 PQEHVLYTPLFKADNARVFD-FELEASTGVAHIADRLFLSATADGLHFGREQMINQNAPFAYDRRILWRRMGRVRKNLGF 452 (472) T ss_pred eeEEEeeccceecCCCeEEE-EEEEeeCCcCccCceEEEEEeccccccchhHHHhhcCccchhheeeeheeeccccccce Confidence 55555668888887765554 34332 222 222222222221110 01111112221 1443333332 6 Q ss_pred EEEEEecceEEEEEeecchh Q lcl|Aclame:pro 544 QVMVSGFGQVERITLSTSMS 563 (567) Q Consensus 544 qiei~g~~~V~~i~la~s~~ 563 (567) .++|+-..+|..--++--|| T Consensus 453 ~~rv~~s~pv~~~~~~a~~e 472 (472) T protein:vir:10 453 KVRVITSSPVTLSGCQIRME 472 (472) T ss_pred EEEEEEecccccccceeeeC Confidence 68888889998877777777 No 33 >protein:vir:2109 Length: 472 # NCBI annotation: head completion protein # Family: family:all:1540 # MgeID: mge:46 # MgeName: P22 # Cross-refs: genbank:acc:NP_059633;genbank:gi:9635541;genbank:GeneID:1262840 Probab=94.59 E-value=0.004 Score=33.73 Aligned_cols=392 Identities=10% Similarity=0.100 Sum_probs=186.8 Q ss_pred CCCCcccceeEecCCCCCCCCccccceeeEEEEEE-EecCCCccCCcccceeEEEecCCCEEEEccccCCCCCC--ccce Q lcl|Aclame:pro 147 IPAPTTAPVCTVQQGGDVSDDNPNDDETRFYTETF-VSDYGEEGPPGPASLEVTLRTPGTAVQLTLAPVPLQNA--SIKR 223 (567) Q Consensus 147 VpaP~~ap~~~v~~g~~~~g~~~~d~et~~Y~~Tf-Vt~~GeES~pS~~S~~v~v~~~g~~V~L~~~p~~~~~~--~it~ 223 (567) .|.-. .|+. .| .... +.+. .|.-.+ |+-+=+|+...-.+ ......+|...... +|-+.-+. |... T Consensus 1 m~~~q-~Pl~---~g-~~~~--~~~~---d~~~~~pVN~~a~~~~~~~s~-~~lr~tPG~~~~~~-~~g~~RG~~~~t~~ 68 (472) T protein:vir:21 1 MPIQQ-LPMM---KG-MGKD--FKNA---DYIDYLPVNMLATPKEILNSS-GYLRSFPGITKRYD-MNGVSRGVEYNTAQ 68 (472) T ss_pred CceEE-eecc---cc-cccc--cccc---ceeeeeeeeeeeeccCCcccc-eeeeecCCcceecc-CCCceeeeeecccC Confidence 11111 1110 00 0000 0000 111111 22222333332222 23344566533333 22222110 1112 Q ss_pred EEEEEEEcCCCCeeEEE---EEeccCcee-eEEeccCcccc--Ccc-----cc--hhhcc-CCCCCC---------ceee Q lcl|Aclame:pro 224 RRIYRSASGGGEADFLL---VAELDASVL-SYTDKIPAKNL--GPS-----LA--TWDYL-PPPENM---------TGLC 280 (567) Q Consensus 224 ~RIYRs~tggg~~e~~l---Vael~~st~-sy~D~~~~~~L--g~~-----L~--t~~~~-~Pp~~~---------~~l~ 280 (567) =++||.. |.+.|+. +++++.+-. ++.|+...-.. +.. +. +.... .|.++. +.+| T Consensus 69 ~~ly~V~---G~~LY~v~~~~G~i~gsgrVsMa~n~~~~~v~~~~~~~~Y~~~~~~~t~~~~~~d~~f~~~dl~~~~dv~ 145 (472) T protein:vir:21 69 NAVYRVC---GGKLYKGESEVGDVAGSGRVSMAHGRTSQAVGVNGQLVEYRYDGTVKTVSNWPADSGFTQYELGSVRDIT 145 (472) T ss_pred CeEEEEe---CCceEEEeeeeeeecccccEEEeeCCeEEEEEECCceeEEEEecchhhhhcccCccccccccccceeEEE Confidence 2344432 1112221 222222211 33443321100 100 00 11011 122211 1233 Q ss_pred eecCcEEE-EEECCEEEEecCCCcccCchhh--c---eecccceEEEEEeCCeEEEEEcCcE--EEEEcCC-cccceeEe Q lcl|Aclame:pro 281 LMANGIAA-GFAGNEVMFSEAYLPYAWPEVN--R---HTTAEDIVAICPLGTSLVVATKGEP--YLFSGVS-PSTISGSK 351 (567) Q Consensus 281 ~~~NG~l~-~a~Gn~l~FSEp~~Phawp~~y--~---~~~~~~Iv~i~pv~~gl~V~T~~~p--y~lsG~~-p~~m~~~~ 351 (567) .-.|++. .-.|...||.-.+.+-..|.+| | ---|+.|++|...-+-||+.-+... |.++|.. +....+++ T Consensus 146 -f~dGyfV~~~~gt~~f~is~l~d~~~~~~y~~FatAE~~pD~Iv~i~~~~~~l~lfG~~TiEvw~ntG~ad~~~fpy~r 224 (472) T protein:vir:21 146 -RLRGRYAWSKDGTDSWFITDLEDESHPDRYSAQYRAESQPDGIIGIGTWRDFIVCFGSSTIEYFSLTGATTAGAALYVA 224 (472) T ss_pred -EecceEEEccCCcceeEEecCCCCccccCCccceeeccCCCceEEEEeeccEEEEEeccceEEEEecCCCCcCcCceEE Confidence 3357754 3346657777666655557776 3 2346999999999999999877766 9999997 45566777 Q ss_pred ec---ccCCcccccceeecCceEEEecCCc----EEEEcCCceeEeecccccchhHHhhhcC-ccc----EEEEEEcCe- Q lcl|Aclame:pro 352 IP---SMQACLSRRSMVAMEGFVLYAGTNG----LVSVDANGNVALATEQIVSPEQWQSQFN-PAS----IVAYPWRGE- 418 (567) Q Consensus 352 l~---~~~pcvs~~siv~~~~~v~y~s~dG----lv~~~~~G~~~~vt~~~~~~~~W~~~l~-P~t----i~a~~~~G~- 418 (567) .+ .+-+|.++.|+..+++.++|+|+++ .|-...+++++.|+--=++ ++|++ .+ |+. +...+.||. T Consensus 225 ~~g~~iq~Gcaa~~sv~~~~~s~~~l~~~~~g~~~V~~~~g~qa~rIST~aIE-~~i~~-y~~~e~~~A~~~t~~~eGH~ 302 (472) T protein:vir:21 225 QPSLMVQKGIAGTYCKTPFADSYAFISHPATGAPSVYIIGSGQASPIATASIE-KIIRS-YTAEEMATGVMETLRFDSHE 302 (472) T ss_pred cCcceeeecccCcchhhecCceEEEEecCCCcccEEEEccCceeEEecCHHHH-HHHHh-cCCccccceEEEEEEeCCeE Confidence 65 5679999999999999999999998 3555567788888555454 78886 54 773 345567898 Q ss_pred -EEEEEecCCCcceeEEEccCCce---eEEEeee------eeEEEEEecCCeEEEE--eCCEEEE--EcCCC---CceeE Q lcl|Aclame:pro 419 -YIACYTKPDGKQDVFVFSPVNMD---IRYLSTP------FDCAWVDLAKDMMRVV--TGDKMSV--LAGGA---LPSTI 481 (567) Q Consensus 419 -Y~~~y~~~~g~~~~~ifd~~~~~---~~~~~~~------~~a~~~~~~~d~ly~~--~g~~i~~--~~~g~---~~~~~ 481 (567) |+..+- + .-+.||...+. -++.... +-+...-...+++-+. +++.||+ |+.+. .+.+. T Consensus 303 fy~LtfP--~---~Tw~yD~at~~~~e~W~~~~sg~~~~~~R~~~~~~~~g~~ivGD~~nG~ly~L~fd~~~~~d~~~~~ 377 (472) T protein:vir:21 303 LLIIHLP--R---HVLVYDASSSQNGPQWCVLKTGLYDDVYRGVDFMYEGNQITCGDKSEAVVGQLQFDISSQYDKQQEH 377 (472) T ss_pred EEEEEcC--C---eeEEEEcccCccCceeeeeccCCCcCceeEEEEEeeCCeEEEEEcCCCeEEEEEecccccCCCcCcE Confidence 777663 3 36888875431 1222211 2222222233444443 2456665 44432 33333 Q ss_pred EEEeeeEEcCCCCceeEEEEeeC-----CcCceEEEEEECCeeeEeecCcccCCcc---------eEcCCcccce-EEEE Q lcl|Aclame:pro 482 RWHSKIFSLPERTSFSCIRVKSP-----APERVGITIMADDVPVIHFAPGTFKGSV---------VRLPAATGQN-WQVM 546 (567) Q Consensus 482 ~WrSK~f~~~~~~~f~~~~V~~~-----~~~~~~~~i~~d~~~~~~~~~~~~~~~~---------~RLP~~~~~~-wqie 546 (567) .=-+..|..+..--|- ..|+.. ....+-++-=-||... .-..-..-+++ -||=..|.+. .+|+ T Consensus 378 ~r~~p~~~~dn~R~fd-~eve~~~Gv~q~~d~v~L~wSddG~~~-~~~~~~~~g~~g~~~tr~~~~RlG~~r~~v~f~~r 455 (472) T protein:vir:21 378 LLFTPLFKADNARCFD-LEVESSTGVAQYADRLFLSATTDGINY-GREQMIEQNEPFVYDKRVLWKRVGRIRRLIGFKLR 455 (472) T ss_pred EEEccceeCCCCEEEE-EeeeccCCCCCcCcEEEEEeecccccc-ccceeeccCCccchhcceeeeeeeecccceeEEEE Confidence 3334444443332222 334311 1223333322343322 21111111222 2444444454 7788 Q ss_pred EEecceEEEEEeecchh Q lcl|Aclame:pro 547 VSGFGQVERITLSTSMS 563 (567) Q Consensus 547 i~g~~~V~~i~la~s~~ 563 (567) ++.+.+|.---+---|| T Consensus 456 ~~~~~~~~l~g~~~~~E 472 (472) T protein:vir:21 456 VITKSPVTLSGCQIRLE 472 (472) T ss_pred EEecCcceeeeeEEeeC Confidence 88888887666666666 No 34 >protein:vir:8887 Length: 808 # NCBI annotation: tail tubular protein B # Family: family:all:825 # MgeID: mge:161 # MgeName: gh-1 # Cross-refs: genbank:acc:NP_813776;genbank:gi:29366731;genbank:GeneID:1258831 Probab=91.55 E-value=0.015 Score=30.53 Aligned_cols=527 Identities=10% Similarity=0.054 Sum_probs=190.8 Q ss_pred eeEE--EecccccccCccchhcCcccccceEEeeee-cCCeEeEeecccccccccc-----ccceEEEEEC--------- Q lcl|Aclame:pro 27 MPYI--DITTMRGMMPRVVTSMLPEHSAVLAEDCHF-RFGVITPERQISGVEKTFT-----IKPKTIFHYR--------- 89 (567) Q Consensus 27 M~~I--~i~~f~G~~pr~~p~lL~~~~a~~A~N~~~-~~G~l~P~~~~~~v~~~~~-----~~~~Tif~~~--------- 89 (567) |+.| .|+.|.|=+=+=.+.+==.+|+..+.|+-. -.|.|+-+.+-..++.... .++...+... T Consensus 1 M~~v~~s~~n~~~GvSqq~d~~R~~~q~~~~~N~~~~~~gG~~rRpgt~~v~~l~~~~~~~~~~~~~~~~~~~~~~y~v~ 80 (808) T protein:vir:88 1 MGLVSQSVKNLKGGISQQPDILRFSNQGALQINGWSSETQGLQKRPPTTFTKRLQNKGFLGTKPLVHLINRDAQEQYFVG 80 (808) T ss_pred CcceeeecchhccceeccchhHhhhhhhhhhhcceeeeccccccCCchheeeeeeccCCCCCCcEEEEEEeCcCceEEEE Confidence 6665 356666655433344444789999999877 5667766666555542111 1112211111 Q ss_pred --CceEEeeC--CeEEEeeCCC----CCCCcc---------eEEEcCCCeeeee-------------eccccccCCcccc Q lcl|Aclame:pro 90 --DDFWFAWP--DVVDVIRSPI----AQDPHG---------RIYYTDGRFPKVT-------------DATIATKGDGNHP 139 (567) Q Consensus 90 --~~~w~~w~--~~V~~~~spi----a~D~~~---------Rvy~tgd~~p~~t-------------~~~iat~g~g~~p 139 (567) ++++-.|. +..-.+..+. +.+|.+ -+|++.-.++... .-.++-.-+|.+. T Consensus 81 ~~~~~i~v~~~~G~~~~v~~~~~y~~~~~~~~~l~~~tvaD~~fi~n~~~~~~~~~~~~~~~~~~~~~~~~~~vr~g~y~ 160 (808) T protein:vir:88 81 FSGTGLAVWDLKGNNYTVRGYNGYANCANPRTDLRLITVADYTFVVNRNTVCQMGSTLTHAAYPRLDGRAIINVRGGQYG 160 (808) T ss_pred EeCCeEEEEEcCCceEEEeecCcceEecCChhheeEEEEcCEEEEEcCCcceeecccccccCCCCCCccEEEEEcccccC Confidence 22233343 1111111111 111111 2233322222110 0000111111111 Q ss_pred cccccccCCCCccc--ceeE--ecCCCC--------CCCCcccc---------------ce---eeEEEE------EEEe Q lcl|Aclame:pro 140 TSSYRLGIPAPTTA--PVCT--VQQGGD--------VSDDNPND---------------DE---TRFYTE------TFVS 183 (567) Q Consensus 140 ~~~y~LgVpaP~~a--p~~~--v~~g~~--------~~g~~~~d---------------~e---t~~Y~~------TfVt 183 (567) ..|.+.|....+. ...+ ...+.. .......+ .. ...|.+ .++. T Consensus 161 -~~y~i~i~g~~s~~~~t~t~~~~~~s~~~v~~~~~~~~~~~~~~~~~~~ia~~l~~~~~~~~~~~~~~~~~~~~~~~i~ 239 (808) T protein:vir:88 161 -RTLSITINGDGTGSSPQASIKMPNGSAEKVPAGDPYAGMNQVDMTDASWIAAELARQLTVSLGGSGWSFQAGTGWILIN 239 (808) T ss_pred -ceEEEEEecCCcceeeeEeEEEccCcccceeeccceeecccCCccccccchhhheeeeeecccccceEEEeccceEEEE Confidence 1233323211000 0000 000000 00000000 00 000100 0000 Q ss_pred cC--C------CccCCcc-cceeEEEecCCCEEEEc-ccc-CCCCCCccceEEEEEEEcCCCCeeEEEEEe--------- Q lcl|Aclame:pro 184 DY--G------EEGPPGP-ASLEVTLRTPGTAVQLT-LAP-VPLQNASIKRRRIYRSASGGGEADFLLVAE--------- 243 (567) Q Consensus 184 ~~--G------eES~pS~-~S~~v~v~~~g~~V~L~-~~p-~~~~~~~it~~RIYRs~tggg~~e~~lVae--------- 243 (567) .. + .++..+. ....+ ...|+.. .+| ..+.+ ..+.|=.+. +.....|++-.+ T Consensus 240 ~~a~~~~~~~~t~~g~~~~~~~~~-----~~~v~~~~~lp~~~p~g---~~v~i~~~~-~~~~~~~yv~~~~~~~~w~e~ 310 (808) T protein:vir:88 240 APANDNVRQIATKDGYADTLLSGF-----IYQVQTFTKLPANAPPG---YLVEITGES-ARSGDNYWVQYDASGKVWKET 310 (808) T ss_pred eccCceeEEEcccCCcCcceeeee-----eeeccceeeccccCCCC---cEEEEEecC-CCCCceeEEEEEcCCeEEEEe Confidence 00 0 0000000 00000 0011100 000 00111 011111111 111112221111 Q ss_pred --------ccCceeeEEec-cCccccCcccchhhcc----------CCCC-CCcee--eeecCcEEEEEECCEEEEecCC Q lcl|Aclame:pro 244 --------LDASVLSYTDK-IPAKNLGPSLATWDYL----------PPPE-NMTGL--CLMANGIAAGFAGNEVMFSEAY 301 (567) Q Consensus 244 --------l~~st~sy~D~-~~~~~Lg~~L~t~~~~----------~Pp~-~~~~l--~~~~NG~l~~a~Gn~l~FSEp~ 301 (567) +..++.-..-. ..+. .-.+...+|. +.|. -.+.+ +.++++||.-+.++.||+|.+- T Consensus 311 ~~~~~~~~~~~~tmp~~lv~~~~~--~~~~~~~~w~~r~~Gd~~tnp~psf~g~~~~~v~f~q~RL~f~~~~~v~~Srtg 388 (808) T protein:vir:88 311 AKPKIIAGFNNATLPHALVRAADG--QFDWTPLTWDGRNAGDDDTNPMPSFVGATINDVFFFRNRLGFLSGENVVMSRTS 388 (808) T ss_pred eeccceeeecccceeEEEEecCCc--eEEEEecccccccccccccCccceecCCceeEEEEEcceEEEeeCCeEEEEecc Confidence 11110000000 0000 0000111121 1221 11112 2588999998899999999999 Q ss_pred CcccC-chhh---------ceecc----cceEEEEEeCCeEEEEEcCcEEEEEcC---CcccceeEeecccCCcccccce Q lcl|Aclame:pro 302 LPYAW-PEVN---------RHTTA----EDIVAICPLGTSLVVATKGEPYLFSGV---SPSTISGSKIPSMQACLSRRSM 364 (567) Q Consensus 302 ~Phaw-p~~y---------~~~~~----~~Iv~i~pv~~gl~V~T~~~py~lsG~---~p~~m~~~~l~~~~pcvs~~si 364 (567) .++-| +..- .+++. ..|.-+.+++..|+++|.+.-|.|+|. +|.+..+.+ ...-.|.+.-.. T Consensus 389 d~~nF~~~t~~~~~DdD~i~~~~~~~~~~~i~~~v~~~~~L~i~T~~~e~~l~~~~~lTP~~~~~~~-~s~~~~~~~~~P 467 (808) T protein:vir:88 389 KYFNFFPSSVATLSDDDPIDVAISHNRISILKYAVPFSEQLLLWSDQAQFVLSSKTILSSKTIELDL-TTEFDVSDGARP 467 (808) T ss_pred CcccccCCcccCCCCCccEEEEecCCccceeeEEeecCCcEEEEecCcEEEEeCCCcccceeEEEEE-EEEecccCCCCc Confidence 98887 3321 12221 335668899999999999999999986 455544333 334467777778 Q ss_pred eecCceEEEecCCcE-EEEcCCceeEeecccccchhHH--hhhcCccc---EEEEEEcCeEEEEEecCCCcceeEEEc-- Q lcl|Aclame:pro 365 VAMEGFVLYAGTNGL-VSVDANGNVALATEQIVSPEQW--QSQFNPAS---IVAYPWRGEYIACYTKPDGKQDVFVFS-- 436 (567) Q Consensus 365 v~~~~~v~y~s~dGl-v~~~~~G~~~~vt~~~~~~~~W--~~~l~P~t---i~a~~~~G~Y~~~y~~~~g~~~~~ifd-- 436 (567) +..++.++|+++.|= +.+--.=..+..+.+--+.+-= ...+-|.. +.+..-+..=+.+.+..+++--++=|. T Consensus 468 v~vG~~v~f~~~~g~~~~v~r~~~~~~~~d~y~~~dlt~~~~h~~~~~~~~~~~~~~~~~~~v~~~~~~g~l~~~~y~~~ 547 (808) T protein:vir:88 468 YGIGRGVYFAAPRASFTSLKRYYAIQDVSDVKSAEDVSAHVPSYITNTVHAIHGSGTENFVSILSDGSPNKVFIYKFLYL 547 (808) T ss_pred eEeCCeEEEEecCCCeeEEEEEEEeeeccCceehhhHHHHHHHhcCCCeEEEEEeCCCCeEEEEEEcCCCEEEEEEEecc Confidence 899999999999982 1000000000111111111100 01112222 223333443344444444433233332 Q ss_pred cCCcee-E--EEeee----eeEEEEEecCCeEEEEeCC----EEEEEcCCCCceeEEEEeeeEEcCCCC----------- Q lcl|Aclame:pro 437 PVNMDI-R--YLSTP----FDCAWVDLAKDMMRVVTGD----KMSVLAGGALPSTIRWHSKIFSLPERT----------- 494 (567) Q Consensus 437 ~~~~~~-~--~~~~~----~~a~~~~~~~d~ly~~~g~----~i~~~~~g~~~~~~~WrSK~f~~~~~~----------- 494 (567) -+.+.+ - +++++ .-++......|.||++..+ .|..++-......+.-....|.+...+ T Consensus 548 ~~e~~v~aW~r~~~~g~~~~~~~~~~~~~d~l~~vV~r~~~~~ler~~~~~~~~~~~~~~~~~~lD~~~~~~~g~~~~~~ 627 (808) T protein:vir:88 548 DEILQQQSFSHWEFGDAATTRVLAASCIGSYCYLMIDRPEGLCLERMEFTQHTIDYSIEPYRTYMDMKKTIVLGAYNIDT 627 (808) T ss_pred CCceeEEeeEEEecCCCeeEEEEEEeccCCEEEEEEEcCCcEEEEEEeeccCCCCCccccceeeeeeeeeeccccccCcc Confidence 122222 1 22221 2366677778999986432 233332211111110011111111111 Q ss_pred ---ceeEEEEeeC--CcCceEEEEEECCeeeEeecCcccCCcceEcCCcc-cceEEE-------------EEE------- Q lcl|Aclame:pro 495 ---SFSCIRVKSP--APERVGITIMADDVPVIHFAPGTFKGSVVRLPAAT-GQNWQV-------------MVS------- 548 (567) Q Consensus 495 ---~f~~~~V~~~--~~~~~~~~i~~d~~~~~~~~~~~~~~~~~RLP~~~-~~~wqi-------------ei~------- 548 (567) .+.+.-+++. ..+...+.+..||..............-+++|..+ +..-.| ++. T Consensus 628 ~~t~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~~~~~~~~~~~~~v~vGl~y~s~~~~~p~~~~~~~g~~~ 707 (808) T protein:vir:88 628 NLTSFDVRTAYGGTPGPESTFYTIDQQGVLIEHEARDWATNPYISFVGNRAGEQMVIGKQYTFQYEFSKFLIKQTADDGS 707 (808) T ss_pred ccceeecccccccccccceeEEEEcCCceEEeeecccccCcceEEeCCCccCceEEEeeeeeEEEEecceEEecCCCCcc Confidence 1111111111 11223334555665432223333344457777653 333222 222 Q ss_pred ------ecceEEEEEee--cchhhhcC Q lcl|Aclame:pro 549 ------GFGQVERITLS--TSMSEMPV 567 (567) Q Consensus 549 ------g~~~V~~i~la--~s~~EL~~ 567 (567) |..+++++.+. .| .++.| T Consensus 708 ~~~~~~gr~~l~r~~~~~~~t-g~~~v 733 (808) T protein:vir:88 708 TSTEDIGRLQLRRAWLNYEES-GAFEI 733 (808) T ss_pred eeecccceEEEEEEEEEeecc-cceEE Confidence 22344443332 22 22222 No 35 >protein:vir:80253 Length: 777 # NCBI annotation: putative tail tubular protein B # Family: family:all:825 # MgeID: mge:1879 # MgeName: LKA1 # Cross-refs: genbank:acc:YP_001522886;genbank:gi:158345179;genbank:GeneID:5687516 Probab=89.98 E-value=0.023 Score=29.53 Aligned_cols=521 Identities=12% Similarity=0.063 Sum_probs=182.3 Q ss_pred eeEE--EecccccccCccchhcCcccccceEEeeee-cCCeEeEeeccccccccccc---cceE-EEE------------ Q lcl|Aclame:pro 27 MPYI--DITTMRGMMPRVVTSMLPEHSAVLAEDCHF-RFGVITPERQISGVEKTFTI---KPKT-IFH------------ 87 (567) Q Consensus 27 M~~I--~i~~f~G~~pr~~p~lL~~~~a~~A~N~~~-~~G~l~P~~~~~~v~~~~~~---~~~T-if~------------ 87 (567) |+.| .|+.|.|=+=+=.+-+-=.+|+..+.|+-. -.|.|+-+.+-+-++..... .... ++. T Consensus 1 M~~i~~~~~nf~~GvS~q~D~~ry~~q~~~~~N~~~~~~gG~~rRpGt~fv~~l~~~~~~~~~~~~~~~~~~~e~~~~l~ 80 (777) T protein:vir:80 1 MSYFAGSYRQLLFGVSQQTAKDRLEGQVESQLNMQSDLVTGPRRRSPVHLIADAMAATDANRLAYSLATFSGREVLLLVD 80 (777) T ss_pred CceeeeecchhhcccccCCchHHhhhHHhhhhcceeeeccCceeCcchHhhhhhcCCCcccceeEEEEecCCCeeEEEEE Confidence 6654 355565543322233333688999999977 56777766665544322110 1111 111 Q ss_pred ECCceEEeeCC--eEEEeeCC---CCCCCc---------ceEEEcCCCeeeeeeccccc-------------cCCccccc Q lcl|Aclame:pro 88 YRDDFWFAWPD--VVDVIRSP---IAQDPH---------GRIYYTDGRFPKVTDATIAT-------------KGDGNHPT 140 (567) Q Consensus 88 ~~~~~w~~w~~--~V~~~~sp---ia~D~~---------~Rvy~tgd~~p~~t~~~iat-------------~g~g~~p~ 140 (567) ..+.++-+|++ ..-.+... ....+. ..+|++.-.+|.......+. .-++.+ . T Consensus 81 ~g~g~irv~~~~~g~~~~~~~~~Yl~a~~~~~l~~~q~aD~~fi~n~~~~p~~~~~~~~~~~~~~~~~~~~~v~~~~~-g 159 (777) T protein:vir:80 81 TLDGTLTILDDATGEVLFTGTNSYLTAGTGRSIRFAALDDSVFVANTEVIPQTQLWSGASAYPDPTRAGYLYVVAGAF-S 159 (777) T ss_pred ecCCeEEEEECCCCeEEEecCCCceeeccccceeEEEEcCEEEEEeCCccceeeecccCCCccCcccceEEEeeccCC-C Confidence 11224555642 22222221 111111 14555543333322111110 001111 1 Q ss_pred ccccccCCCCcccceeEecCCCCCCCCccccce-------------ee---EEEEEEEecCCCc--cCCcccceeEEEec Q lcl|Aclame:pro 141 SSYRLGIPAPTTAPVCTVQQGGDVSDDNPNDDE-------------TR---FYTETFVSDYGEE--GPPGPASLEVTLRT 202 (567) Q Consensus 141 ~~y~LgVpaP~~ap~~~v~~g~~~~g~~~~d~e-------------t~---~Y~~TfVt~~GeE--S~pS~~S~~v~v~~ 202 (567) ..|.+.+-........+...+.........+.+ .. .-.++++...+.. ..++ ...++... T Consensus 160 ~~y~i~i~~~~~~~~~t~~~~t~~~~~~~~~~~~ia~~L~~~~~~~~~~~s~~~~~~~~~g~~~~i~~~~--~~~~t~~~ 237 (777) T protein:vir:80 160 KQYRLSITNQVTGVTTSVDVTTSATEASQATGEYVITQLRTAAEADATIGTAAGFAYYQDGAYLYVTAPE--AIAVSTDS 237 (777) T ss_pred ceeeEeecCCcCceeEEEecCCcccccccccchhhhhhhhhhhccccceeecCceEEEeCCcEEEEEecC--ceeEecCC Confidence 123444443333333332222221111000000 00 0000110000000 0000 00011000 Q ss_pred CCC--------EE-EEccccC-CCCCCccceEEEEEEEcCCCCeeEEEEEeccCceeeEEecc----------CccccCc Q lcl|Aclame:pro 203 PGT--------AV-QLTLAPV-PLQNASIKRRRIYRSASGGGEADFLLVAELDASVLSYTDKI----------PAKNLGP 262 (567) Q Consensus 203 ~g~--------~V-~L~~~p~-~~~~~~it~~RIYRs~tggg~~e~~lVael~~st~sy~D~~----------~~~~Lg~ 262 (567) ... .| ....+|. .+.+ ...|...+++...+|++.-+...+ ....+. ....|.+ T Consensus 238 g~~~~~~~~~~~v~~~~~lp~~~~~~-----~~~~~~~~~~~~~~~y~~~~~~~~--~w~e~~~~~~~~~~~t~p~~l~~ 310 (777) T protein:vir:80 238 GSNFLRASNAASIRDAAELPAKLPAD-----ADGFIIATGAAKNKTYFRWVDLER--KWDEDASRGAQAELIDMPLRITY 310 (777) T ss_pred cCccceeeeeEEEeeccccccccccc-----cceEEEeCCCCCCceEEEEEccCc--EEEEeecccccccccccceEEEe Confidence 000 00 0111111 1111 124444444433333332221100 000000 0000100 Q ss_pred ccchhh-----cc----------C-CCCCCcee--eeecCcEEEEEECCEEEEecCCCcccC-chh-------hceec-- Q lcl|Aclame:pro 263 SLATWD-----YL----------P-PPENMTGL--CLMANGIAAGFAGNEVMFSEAYLPYAW-PEV-------NRHTT-- 314 (567) Q Consensus 263 ~L~t~~-----~~----------~-Pp~~~~~l--~~~~NG~l~~a~Gn~l~FSEp~~Phaw-p~~-------y~~~~-- 314 (567) .-.++. |. + |.-..+.+ +.++++||.-+.++.||+|.+-.++-| +.. .-+.+ T Consensus 311 ~~~~~~~~~~~w~~r~~gd~~tn~~Psf~g~~i~~v~f~q~RL~f~~~~~v~~Srtgd~~nF~~~s~~~~~DdDpI~~~~ 390 (777) T protein:vir:80 311 SAPNFSLTALNYERRASGDATSNPALKFTEQGISGMTTMQGRLVLLAGEYVCMSASGNPLRWFRASVSTQSDDDPIEVAA 390 (777) T ss_pred cCCceEeeccCCccccccccccCCCceecCCceeEEEEEcceeeeecCCeEEEEeccCccccccccccCCCCCccEEEEE Confidence 001111 11 1 11112222 358899998889999999999999887 332 11222 Q ss_pred ----ccceEEEEEeCCeEEEEEcCcEEEEEcC---CcccceeEeecccCCcccccceeecCceEEEecCCc--EEEE--- Q lcl|Aclame:pro 315 ----AEDIVAICPLGTSLVVATKGEPYLFSGV---SPSTISGSKIPSMQACLSRRSMVAMEGFVLYAGTNG--LVSV--- 382 (567) Q Consensus 315 ----~~~Iv~i~pv~~gl~V~T~~~py~lsG~---~p~~m~~~~l~~~~pcvs~~siv~~~~~v~y~s~dG--lv~~--- 382 (567) ...|.-+.+++.+|+++|.+.-|.|+|. +|.+..+.+. ....|.+.-..+..++.++|+++++ +..+ T Consensus 391 ss~~~~~i~~~v~~~~~L~i~T~~~e~~l~~~~~lTP~~~~~~~~-s~~~~~~~~~Pv~vG~~v~Fv~~r~g~~s~v~e~ 469 (777) T protein:vir:80 391 TAPVASPYEYAVAFNKDLVLFAKTHQGLVPGANLLTSRNATAAVV-TEYSFQNSCSPVVAGRTVFFASPRSGPWSAVWEM 469 (777) T ss_pred cCCcceeeeeeeecCCcEEEEecCceEEEeCCCcccceeEEEEEE-EeeccCCCCCceEeCCeEEEEecCCCceeEEeee Confidence 2446668889999999999999999985 4555443332 3335776777788999999998764 2211 Q ss_pred c-----CCc-eeEeecccccchhHHhhhcCcccEEEEEEcCe--EEEEEecCCCcceeEEEc--cCCcee-EE--Eeeee Q lcl|Aclame:pro 383 D-----ANG-NVALATEQIVSPEQWQSQFNPASIVAYPWRGE--YIACYTKPDGKQDVFVFS--PVNMDI-RY--LSTPF 449 (567) Q Consensus 383 ~-----~~G-~~~~vt~~~~~~~~W~~~l~P~ti~a~~~~G~--Y~~~y~~~~g~~~~~ifd--~~~~~~-~~--~~~~~ 449 (567) . .++ ++.-+|.- ...+-|..+..+.+-.. .+.+....+|+--++-|. -..+.+ -+ ++++- T Consensus 470 ~~~~~~~d~y~a~Dlt~~-------~~hl~~~~v~~~a~s~~p~~v~~~~~~dg~l~~~ty~~~~~e~~v~aW~r~~~~g 542 (777) T protein:vir:80 470 LPSQYTDAQVEASDSTSH-------LPKYIAGPVRFLATSSTTSIVVVGTSNLRELVVHEYLWQGGEKVHAAWHKWSFPQ 542 (777) T ss_pred eecccccCceehhHHHHH-------HHHhcCCceEEEEEcCCCceEEEEEcCCCeEEEEEEeecCCceEEEeeEEeccCC Confidence 1 111 01111110 00111223322222211 222222223322122221 122221 22 22221 Q ss_pred eEEEEEecCCeEEEEeCC----EEEEEcC----C---CCceeEEEEeeeEEcCCCCceeEEEEeeC-CcCceEEEEEECC Q lcl|Aclame:pro 450 DCAWVDLAKDMMRVVTGD----KMSVLAG----G---ALPSTIRWHSKIFSLPERTSFSCIRVKSP-APERVGITIMADD 517 (567) Q Consensus 450 ~a~~~~~~~d~ly~~~g~----~i~~~~~----g---~~~~~~~WrSK~f~~~~~~~f~~~~V~~~-~~~~~~~~i~~d~ 517 (567) .........|.||++-.+ -|.+++- + +....+.+.......- ......-.+-.+ ..+.....+..+| T Consensus 543 ~v~~v~~i~d~l~~iv~r~~~~~le~~~~~~~~d~~~~~~~~~D~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~v~~~~ 621 (777) T protein:vir:80 543 DITGAYFRGDRLILLFHVAGRVILGELFMQRLGDAQSIPGGFLDLYRVGAANA-DEEVAIPAFAADLYPEDSTFAYKLSG 621 (777) T ss_pred cEEEEEEECCEEEEEEEcCCeEEEEEEeeccCCCCcccceeeeeeeeeeeeee-CCccceeEeeccccCCcceeEEEecC Confidence 122333347999986432 2444532 1 1111111111100000 000000000000 1111222222222 Q ss_pred eeeEee---cCcccCC--cceEcCCcc-------cceEE--E--------------EEEecceEEEEEeec--chhhhcC Q lcl|Aclame:pro 518 VPVIHF---APGTFKG--SVVRLPAAT-------GQNWQ--V--------------MVSGFGQVERITLST--SMSEMPV 567 (567) Q Consensus 518 ~~~~~~---~~~~~~~--~~~RLP~~~-------~~~wq--i--------------ei~g~~~V~~i~la~--s~~EL~~ 567 (567) ...... .....+. ...+++..+ +.... | ...|..+|+++.+.- |. .+.| T Consensus 622 ~~~~~~~~~~~v~~~~~~~~~~v~~~~~~~~v~VGl~y~s~~~~~~~~~~~~~g~~~~~~r~~i~r~~~~~~~sg-~~~v 700 (777) T protein:vir:80 622 EFQSLGQRCGDRRVDGATVYIKVVGAQAGDQYRIGLRYLSKLGPTRPILRDPNGVPITTERTQLHRLTWSLDSTG-EVTF 700 (777) T ss_pred cccccceeeeeEEeCCceeeEEEcCCCCCCEEEEeeeeEEEEEeCceEEeCCCCceeeecCeEEEEEEEEeeccc-cEEE Confidence 110000 0000000 001111110 01111 1 122334455543322 21 1111 No 36 >protein:vir:99677 Length: 794 # NCBI annotation: Tail tubular protein B # Family: family:all:825 # MgeID: mge:1523 # MgeName: VP4 # Cross-refs: genbank:acc:YP_249591;genbank:gi:68299742;genbank:GeneID:3799992 Probab=85.38 E-value=0.053 Score=27.57 Aligned_cols=524 Identities=13% Similarity=0.144 Sum_probs=197.7 Q ss_pred eeEE--EecccccccCccchhcCcccccceEEeeee-cCCeEeEeeccccccccccc-----cceEEEEEC----CceEE Q lcl|Aclame:pro 27 MPYI--DITTMRGMMPRVVTSMLPEHSAVLAEDCHF-RFGVITPERQISGVEKTFTI-----KPKTIFHYR----DDFWF 94 (567) Q Consensus 27 M~~I--~i~~f~G~~pr~~p~lL~~~~a~~A~N~~~-~~G~l~P~~~~~~v~~~~~~-----~~~Tif~~~----~~~w~ 94 (567) |+.| .|+.|.|=+=+=.+-+-=.+|+..+.|+-. -.|.|+-+.+-..++..... +++ ||.+. ..+.+ T Consensus 1 M~~i~~s~~n~~~GvS~q~D~~ry~~q~~~~~N~~~~~~gG~~rRpG~~fv~~l~~~~~~~~~~~-l~~f~~~~~~~y~l 79 (794) T protein:vir:99 1 MALISQSIKNLKGGISQQPDILRYSDQGSKQINGFSSEVEGLQKRPPSVHIKRLTDQFGLGQKPY-CHIINRDEVERYAV 79 (794) T ss_pred CceeeeecchhhcceecCCchHHhhhhHhhhhcceeeeccCcccCCccceeeeecCCCCCccccE-EEEEEeCCCceEEE Confidence 7665 466666654333333334789999999988 57888877776666542211 122 33321 23444 Q ss_pred eeC-----------CeEEEeeCCC------CCCC---------cceEEEcCCCeeeeeeccc-------------cccCC Q lcl|Aclame:pro 95 AWP-----------DVVDVIRSPI------AQDP---------HGRIYYTDGRFPKVTDATI-------------ATKGD 135 (567) Q Consensus 95 ~w~-----------~~V~~~~spi------a~D~---------~~Rvy~tgd~~p~~t~~~i-------------at~g~ 135 (567) .+. +....+..|. +.++ ...+|++.-.+|....... ...-+ T Consensus 80 ~f~~~~irv~~~~~g~~~~v~~~~~~~y~~~~~~~~~l~~~q~aD~~fi~n~~~~p~~~~~~~~~~~~~~~~~~~~~v~~ 159 (794) T protein:vir:99 80 FFTGSNIRVFDLFTGDEKTVNAPNGLSYVSSSNPRKDLRMVTVADYTFILNRNVATAQGTTNTPSGLAPFGHFGLVVIRG 159 (794) T ss_pred EEcCCeEEEEECCCCeEEEeeccccccccccCCccceeeEEEEccEEEEEcCCeeeeEeeeeccccCcCCCceEEEEecc Confidence 432 2222232331 1111 1134555433333211100 00011 Q ss_pred cccccccccccCCCCcccceeEecCCCCCCCCccccce-----------eeEEEE------EEEecCCC---------cc Q lcl|Aclame:pro 136 GNHPTSSYRLGIPAPTTAPVCTVQQGGDVSDDNPNDDE-----------TRFYTE------TFVSDYGE---------EG 189 (567) Q Consensus 136 g~~p~~~y~LgVpaP~~ap~~~v~~g~~~~g~~~~d~e-----------t~~Y~~------TfVt~~Ge---------ES 189 (567) +.+.. .|.+.+.....+...+ ..+.........+.+ .--|.+ +|++..+. .+ T Consensus 160 g~y~~-~y~v~i~gs~ta~~~t-p~~~~~~~~~~~s~~~ia~~l~~~l~~~g~~v~~~~g~~~i~~~~~~~v~t~s~~~g 237 (794) T protein:vir:99 160 GQYGR-TYRIKVNGSVEASFET-PLGDQVAHAKQIDIAYIIDQLAAGLINKGWAVTKGSGYFYFSKSGSVIINSLEVEDG 237 (794) T ss_pred CCCCc-eEEEEecCCcccceee-ccCcccccccccchhhhhhhhHhhhhcccceEEeCCeEEEEEecCCceeEEEEeecC Confidence 12211 1333332221111111 111110000000000 000111 11111110 00 Q ss_pred CCcccceeEEEecCCCEEEEccccCCCCCCccceEEEEEEEcCCCCeeEEEEEeccCceeeEEeccCc------------ Q lcl|Aclame:pro 190 PPGPASLEVTLRTPGTAVQLTLAPVPLQNASIKRRRIYRSASGGGEADFLLVAELDASVLSYTDKIPA------------ 257 (567) Q Consensus 190 ~pS~~S~~v~v~~~g~~V~L~~~p~~~~~~~it~~RIYRs~tggg~~e~~lVael~~st~sy~D~~~~------------ 257 (567) ........+... -++.-+|+ ...++| ..++|=-+ .+.+..+|++..+-..+ .+...... T Consensus 238 ~~~t~~~~~~~~-v~~~~~Lp--~~~~~G---~~v~v~~~-~~~~~~~y~v~~~~~~~--~w~e~~~~~~~~~~~~~t~p 308 (794) T protein:vir:99 238 YNGQLAWGIIND-VQKTTQLP--VYAPNN---YIIRVSGD-PTLNQDDYYVRFDASRN--VWTECPAPNIKADYNKATMP 308 (794) T ss_pred CCCceeeEEeee-ccceeecc--cCCCCC---eEEEEecc-CCCCCCceEEEEEcCCc--eEEeeccceeecceeccceE Confidence 000000000000 01111111 111111 11111110 11122233333222111 11110000 Q ss_pred ccc-----C-cccchhhccC---------CCCC--Cc---eeeeecCcEEEEEECCEEEEecCCCcccC-chh------- Q lcl|Aclame:pro 258 KNL-----G-PSLATWDYLP---------PPEN--MT---GLCLMANGIAAGFAGNEVMFSEAYLPYAW-PEV------- 309 (567) Q Consensus 258 ~~L-----g-~~L~t~~~~~---------Pp~~--~~---~l~~~~NG~l~~a~Gn~l~FSEp~~Phaw-p~~------- 309 (567) ..+ + -.+...+|.. |.+. .+ .+ .++++||.-+.++.||+|..-.++-| +.. T Consensus 309 ~~~v~~~~~~~~~~~~~w~~r~~Gd~~tnp~psf~g~~is~v-~f~q~RL~f~~~~~v~~Srtgd~~nF~~~t~~~~~Dd 387 (794) T protein:vir:99 309 HVLIREADGTFTFKQADWTHRAAGDDETNPYPSFIGNSINDI-FFFRNRLGFLSGENVILSGSGNYFNFFPESVAVLTDT 387 (794) T ss_pred EEEeccCCCceeEeeccccccccCCcccCCCccccCcceeEE-EEEeeeEEEecCCeEEEEecCCccccccccccCCCCC Confidence 000 0 0111112321 2222 22 23 48899998889999999999888886 331 Q ss_pred hceec------ccceEEEEEeCCeEEEEEcCcEEEEEcC---CcccceeEeecccCCcccccceeecCceEEEecCCcE- Q lcl|Aclame:pro 310 NRHTT------AEDIVAICPLGTSLVVATKGEPYLFSGV---SPSTISGSKIPSMQACLSRRSMVAMEGFVLYAGTNGL- 379 (567) Q Consensus 310 y~~~~------~~~Iv~i~pv~~gl~V~T~~~py~lsG~---~p~~m~~~~l~~~~pcvs~~siv~~~~~v~y~s~dGl- 379 (567) .-+.+ ...|.-+.+++..|+++|.+.-|.|+|. +|.+.++.+ ...-.|.+.-..+..++.++|+++.|= T Consensus 388 D~I~~~~~~~~~~~i~~~v~~~~~L~l~t~~~q~~l~~~~~lTP~~~~~~~-~s~~~~~~~~~Pv~vg~~v~f~~~~g~~ 466 (794) T protein:vir:99 388 DPIDVAVSTNRISILKYAVPFSEELILWSDQAQFVLSSDGGLTPTTIRLDL-TTEFEVTEQARPYGIGRGVYFVSPRAKF 466 (794) T ss_pred ccEEEEecCCcceeeEEEeecCCcEEEEecCcEEEEeCCCcccceeEEEEE-EEEeeccCCCCceEeCCeEEEEecCCCe Confidence 12222 2456678889999999999999999986 455544333 233357777778899999999999982 Q ss_pred --EEE-cCCceeEeecccccchhHHh--hhcCccc---EEEEEEcCeEEEEEecCCCcceeEEEc--cCCcee-EEEeee Q lcl|Aclame:pro 380 --VSV-DANGNVALATEQIVSPEQWQ--SQFNPAS---IVAYPWRGEYIACYTKPDGKQDVFVFS--PVNMDI-RYLSTP 448 (567) Q Consensus 380 --v~~-~~~G~~~~vt~~~~~~~~W~--~~l~P~t---i~a~~~~G~Y~~~y~~~~g~~~~~ifd--~~~~~~-~~~~~~ 448 (567) ++- .+ .+..+++--+.|--+ ..+=|.. +.|..-+..=+.+.+..+|+--++-|. -..+.+ -++... T Consensus 467 ~~v~r~~~---~~~~~d~y~a~Dlt~~~~hl~~~~~~~~~a~~~~~~~~v~~~~~~g~l~~~~y~~~~~eq~v~aW~~~~ 543 (794) T protein:vir:99 467 SSVRRFYA---VQDVTQVKNAEDISAHVPYYVENGVFKMSGSSTENFLTILTEGNEQRVYFYKFLYLQEQLVQQSWSHWD 543 (794) T ss_pred eEEEEeee---eccccCceehhhHHHHHHHhcCCCeEEEEEeCCCCcEEEEEEcCCCEEEEEEEeecCCceEEEeEEEEE Confidence 110 00 001111111111110 0111111 223333343333444334433333332 122221 222222 Q ss_pred ee----EEEEEecCCeEEEEeCC----EEEEEc--CCCC---ceeEEE--EeeeEEc-CCC-CceeEEE-------EeeC Q lcl|Aclame:pro 449 FD----CAWVDLAKDMMRVVTGD----KMSVLA--GGAL---PSTIRW--HSKIFSL-PER-TSFSCIR-------VKSP 504 (567) Q Consensus 449 ~~----a~~~~~~~d~ly~~~g~----~i~~~~--~g~~---~~~~~W--rSK~f~~-~~~-~~f~~~~-------V~~~ 504 (567) ++ ++......|.||++-.+ .|.+++ ..+. ..+++. .++.-.. +.. .+=++.+ +++. T Consensus 544 ~~g~~~~~~~~~~~d~l~~~v~r~~~~~ler~~~~~~~~~~~~~~~~~~lD~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 623 (794) T protein:vir:99 544 FGVNCRVLCCDMIGAVMHLIIDSPSGVLMEKIEFTQNTKDYPDEPYRLYVDRKIEYTFPEGSYNDDDFKTRVKLKDIYGS 623 (794) T ss_pred cCCCeEEEEEEEcCCEEEEEEEeCCCEEEEEEEeeeCCCCCCCcccceeeeeeeeeeecccccccCcceeEEeccccccc Confidence 22 11222357999997432 344443 1111 011111 1211111 100 0000001 1111 Q ss_pred C-cCceEEEEEECCeeeEeecC-c--ccCCcceEcCCcc-c--------ceEEE-----EEE-------------ecceE Q lcl|Aclame:pro 505 A-PERVGITIMADDVPVIHFAP-G--TFKGSVVRLPAAT-G--------QNWQV-----MVS-------------GFGQV 553 (567) Q Consensus 505 ~-~~~~~~~i~~d~~~~~~~~~-~--~~~~~~~RLP~~~-~--------~~wqi-----ei~-------------g~~~V 553 (567) . .+--.+.+.+||.......+ . ......++||..+ + -+.+| ++. |..++ T Consensus 624 ~~l~g~~v~~~~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~vGl~y~s~~~~~~~~~~~~~~~g~~~~~~~gr~~l 703 (794) T protein:vir:99 624 TPANGQYVFISLGGVTFTFDPPAGGWQANDGLIEFDGDLRGTKFFVGEAYTFLYEFSKFLIKTTDTADGVATEDIGRLQL 703 (794) T ss_pred cccCCceEEEEeCCceeeeecccceEecCccEEEecCCCCCcEEEEeeeeeEEEeecceEEeecCCCCceeeeccceEEE Confidence 1 12234567788765322111 1 1122345666421 1 11222 221 12234 Q ss_pred EEEEeec-chhhhcC Q lcl|Aclame:pro 554 ERITLST-SMSEMPV 567 (567) Q Consensus 554 ~~i~la~-s~~EL~~ 567 (567) +++.+.- .-..+.| T Consensus 704 ~r~~~~~~~tg~~~v 718 (794) T protein:vir:99 704 RRAWVNYDKSGNFRV 718 (794) T ss_pred EEEEEEeecccceEE Confidence 4444331 0111111 No 37 >protein:vir:1543 Length: 801 # NCBI annotation: tail tubular protein B # Family: family:all:825 # MgeID: mge:31 # MgeName: phiYeO3-12 # Cross-refs: genbank:acc:NP_052111;swissprot:trembl:q9t105;genbank:gi:9634037;uniprot:Q9T105;genbank:GeneID:1262408 Probab=79.87 E-value=0.1 Score=26.06 Aligned_cols=519 Identities=11% Similarity=0.127 Sum_probs=194.1 Q ss_pred eeEE--EecccccccCccchhcCcccccceEEeeee-cCCeEeEeeccccccccccc---cceEEEE-E----------- Q lcl|Aclame:pro 27 MPYI--DITTMRGMMPRVVTSMLPEHSAVLAEDCHF-RFGVITPERQISGVEKTFTI---KPKTIFH-Y----------- 88 (567) Q Consensus 27 M~~I--~i~~f~G~~pr~~p~lL~~~~a~~A~N~~~-~~G~l~P~~~~~~v~~~~~~---~~~Tif~-~----------- 88 (567) |+.| .|+.|.|=+=+=.+.+-=.+|+..+.|+-. -.|.|+-+-+-.-++..... ....+++ + T Consensus 1 M~~i~~s~~n~~~GvSqq~d~~r~~~q~~~~~N~~~~~~gGl~rRpGt~~va~~~~~~~~~~~~~~~~~~~~~~e~y~l~ 80 (801) T protein:vir:15 1 MALISQSIKNLKGGISQQPDILRFAEQGSVQINGWSSESEGLQKRPPMIHLKTLGPAGYVGAQPYVHLINRDEFEQYFVV 80 (801) T ss_pred CceeeeecchhhcceecCcchHhhhhhHhhhhcceeccccCcccCCchheeeeecCCCCcccceeEEEEEeCCceEEEEE Confidence 7665 456666554433344444789999999887 56777766655555432111 1111211 1 Q ss_pred -CCceEEeeCC--eEEEee--CCC--CCCCcc---------eEEEcCCCeeeeeecc------cccc-------CCcccc Q lcl|Aclame:pro 89 -RDDFWFAWPD--VVDVIR--SPI--AQDPHG---------RIYYTDGRFPKVTDAT------IATK-------GDGNHP 139 (567) Q Consensus 89 -~~~~w~~w~~--~V~~~~--spi--a~D~~~---------Rvy~tgd~~p~~t~~~------iat~-------g~g~~p 139 (567) .+..|-.|+. .+-.+. .|- +-++.+ -+|++.-.++...... .... ..+.+- T Consensus 81 ~~~~~irv~~~~G~~~~v~~~~~y~~~~~~~~~l~~~~~aD~~fi~nr~~~~~~~~~~~~~~~~~~~~~alv~v~~~~yg 160 (801) T protein:vir:15 81 FTGEDIKVFDLDGKEYQVRGDRSYVRTANPREDLRMITVADYTFVTNRKVVVQSNDQSVNLPGFKDQGDALINVRGGQYG 160 (801) T ss_pred EcCCeEEEEccCCcEEEEecCCccccccCchhheeEEEEcCEEEEeeCCeeeecccCccccCccCCCCceEEEeeeccCc Confidence 1233444531 111111 111 111111 2334332222111100 0000 000000 Q ss_pred cccccccCCCCcccceeEecCCCCCCCCcccc----------------------ceeeEEEEE------EEecC------ Q lcl|Aclame:pro 140 TSSYRLGIPAPTTAPVCTVQQGGDVSDDNPND----------------------DETRFYTET------FVSDY------ 185 (567) Q Consensus 140 ~~~y~LgVpaP~~ap~~~v~~g~~~~g~~~~d----------------------~et~~Y~~T------fVt~~------ 185 (567) ..|++.+-. ...-..++..+.......+.+ .....|+++ ++.+- T Consensus 161 -~t~~I~i~g-s~~~~~t~~~gs~~~~~~~~s~~~ia~~l~~~~~~~~p~~~~~~~~~~w~~~~~~g~~~i~a~~~~~~~ 238 (801) T protein:vir:15 161 -RRLSIEFNG-AERAAVQLPDGSQPAHVNEVDGQAIAEKLAAQLRNNLGNPNNDQDPNKWRFNVGPGFIHILAPNNDNVW 238 (801) T ss_pred -eeEEEEeCC-cceEEEEeccCcccchhhhcceeechHHHhhhhhhccCccceeccCccEEEEecCcEEEEeCCCCcccc Confidence 001111100 000001111111100000000 000011111 11110 Q ss_pred CCccCCcccceeEE-Eec-CCCEEEEccccCCCCCCccceEEEEEEE-cCCCCeeEEEEEec-----------------c Q lcl|Aclame:pro 186 GEEGPPGPASLEVT-LRT-PGTAVQLTLAPVPLQNASIKRRRIYRSA-SGGGEADFLLVAEL-----------------D 245 (567) Q Consensus 186 GeES~pS~~S~~v~-v~~-~g~~V~L~~~p~~~~~~~it~~RIYRs~-tggg~~e~~lVael-----------------~ 245 (567) ..+...+..-.... +.. -++.-+|+.. .+.+. + ++| +. ++.....|+.-.+- . T Consensus 239 ~~~t~dg~~~~~~~~~~~~v~~~~~lp~~--~~~G~-~--v~v--~~~~~~~~~~y~v~~~~~~~~w~E~a~~g~~~~~~ 311 (801) T protein:vir:15 239 GLQTKDGYADQLINPVTHYTQSFQKLPIN--APDGY-I--VKI--VGDTSKTADQYYVRFDLNRKVWVETIGWNTRTHLY 311 (801) T ss_pred eeeeccccCceeeeEEeecccceeeeeee--cCCCc-E--EEE--EecCCCccceEEEEEEcCCeeEEeecccccceeee Confidence 00000000000000 000 0011112110 01110 0 110 01 11111122211110 0 Q ss_pred ----------CceeeEEeccCcc---ccCcccchhhccCCC-CCCcee--eeecCcEEEEEECCEEEEecCCCcccC-ch Q lcl|Aclame:pro 246 ----------ASVLSYTDKIPAK---NLGPSLATWDYLPPP-ENMTGL--CLMANGIAAGFAGNEVMFSEAYLPYAW-PE 308 (567) Q Consensus 246 ----------~st~sy~D~~~~~---~Lg~~L~t~~~~~Pp-~~~~~l--~~~~NG~l~~a~Gn~l~FSEp~~Phaw-p~ 308 (567) .+..+|.....+- ..|+. +.+|.| -..+++ +.++++||.-+.++.||+|..-.++-| +. T Consensus 312 ~~tmp~~lv~~~~~~~~~~~~~w~~r~~gd~----~tnp~psf~g~~~~~v~f~q~RL~f~~~~~v~~Srtgd~~nF~~~ 387 (801) T protein:vir:15 312 YHTMPWALVRASDGNFDFKVLEWGARTVGDD----TTNPYPSFTGQTINDIFFFRNRLGFLSGENIILSRTSKYFNFFPA 387 (801) T ss_pred ccccceEEEeeccceEEEeccccccccCCcc----ccCCcccccCCCceEEEEEcceEEEeeCCeEEEEecCCccccccc Confidence 0112222211110 01110 011111 112222 358899998889999999999888886 43 Q ss_pred h-------hceec------ccceEEEEEeCCeEEEEEcCcEEEEEcC---CcccceeEeecccCCcccccceeecCceEE Q lcl|Aclame:pro 309 V-------NRHTT------AEDIVAICPLGTSLVVATKGEPYLFSGV---SPSTISGSKIPSMQACLSRRSMVAMEGFVL 372 (567) Q Consensus 309 ~-------y~~~~------~~~Iv~i~pv~~gl~V~T~~~py~lsG~---~p~~m~~~~l~~~~pcvs~~siv~~~~~v~ 372 (567) . .-+.+ ...|.-+.+++.+|+++|++.-|.|+|. +|.+.++.+ ...-.|.+.-..+..++.++ T Consensus 388 t~~~~~DdD~i~~~~~~~~~~~i~~~v~~~~~L~i~t~~~q~~ls~~~~lTP~~~~~~~-~s~~~~~~~~~Pv~vg~~v~ 466 (801) T protein:vir:15 388 SVSNYSDDDPIDVAVSHNRVSTLKYAVPFSEELLLWSDQAQFVLTASGILSSRSVELNL-TTQFDVQDRARPHGVGRNVY 466 (801) T ss_pred cccCCCCCccEEEEecCCcceeeEEEeecCCcEEEEecCcEEEEcCCCcccceeEEEEE-EEeeeccCCCCceEeCCeEE Confidence 1 22222 2556668899999999999999999986 455544333 23345776677788999999 Q ss_pred EecCCcE--------EEEc-CCc-eeEeecccccchhHHhhhcCcccEEEEE---EcCeEEEEEecCCCcceeEEEcc-- Q lcl|Aclame:pro 373 YAGTNGL--------VSVD-ANG-NVALATEQIVSPEQWQSQFNPASIVAYP---WRGEYIACYTKPDGKQDVFVFSP-- 437 (567) Q Consensus 373 y~s~dGl--------v~~~-~~G-~~~~vt~~~~~~~~W~~~l~P~ti~a~~---~~G~Y~~~y~~~~g~~~~~ifd~-- 437 (567) |+++.|= ..-. .++ ++.-+|. +. ..+=|..+.... -++.=+.+.+..+++--++-|.. T Consensus 467 f~~~~g~~~~~~r~~~~~~~~d~y~a~Dlt~--~~-----~hl~~~~v~~~~~~~~~~~~~~~~~~~~~~l~~~~y~~~~ 539 (801) T protein:vir:15 467 FASPRASFTSINRYYAVQDVSSVKNAEDMTA--HV-----PNYIPNGVFSISGTTAENFAAILTSGAPNRVYIYKFLYID 539 (801) T ss_pred EEecCCCeeEEEEEEeecccccceehhhHHH--HH-----HHhcCCceEEEEEeCCCCcEEEEEEcCCCEEEEEEEecCC Confidence 9999982 1111 111 0111110 00 011122221111 12222222333333222332321 Q ss_pred CCcee-EEEeeee----eEEEEEecCCeEEEEeCC----EEE--EEcC------CCCceeEEEEeeeEEcCCCCceeE-- Q lcl|Aclame:pro 438 VNMDI-RYLSTPF----DCAWVDLAKDMMRVVTGD----KMS--VLAG------GALPSTIRWHSKIFSLPERTSFSC-- 498 (567) Q Consensus 438 ~~~~~-~~~~~~~----~a~~~~~~~d~ly~~~g~----~i~--~~~~------g~~~~~~~WrSK~f~~~~~~~f~~-- 498 (567) +.+.+ -++...+ -+.-.....|.||++..+ .+. ++.. ++....+.+....|..+. .++.. T Consensus 540 ~e~~v~aW~~~~~~g~~~~~~~~~~~d~l~~~v~r~~~~~~~r~~~~~~~~~~~~~~~~~~lD~~~~~~~~~-~t~~~~~ 618 (801) T protein:vir:15 540 EEIRQQSWSHWDFGDNVTVFAAQVINSTMTVLMGNEHAVWMGRLHFTKNSIDIPGEPYRLYIDAKRKYTIPA-GTYNDDT 618 (801) T ss_pred CceEEEeeEEEEcCCCEEEEEEEecCCEEEEEEEecCcEEEEEEEEccccccCCCcceeeeeeeeeeEeecc-ceeccCc Confidence 21211 2222222 222223457999986422 222 2222 122233455555554432 22222 Q ss_pred -------EEEeeC-CcCceEEEEEECCeeeEeecC--cccCCcceEcCCcc-cc--------eEEEE-----EE------ Q lcl|Aclame:pro 499 -------IRVKSP-APERVGITIMADDVPVIHFAP--GTFKGSVVRLPAAT-GQ--------NWQVM-----VS------ 548 (567) Q Consensus 499 -------~~V~~~-~~~~~~~~i~~d~~~~~~~~~--~~~~~~~~RLP~~~-~~--------~wqie-----i~------ 548 (567) ..+++- ..+...+.++.||........ +...+..+++|..+ +. +.+|| |. T Consensus 619 ~~~~~~~~~~~gl~~l~g~~v~v~~dG~~~~~~~~~~g~~~~~~~~i~~~~~~~~v~vGl~y~~~~~~~~~~~~~~~~~~ 698 (801) T protein:vir:15 619 YQTSISLATIYGMNFTKGRVSVVFPDGKIIEVDQPINGWSSDPVLRLDGNQEGQVVYIGFNIPFTYTFSKFLIKKTAEDG 698 (801) T ss_pred eecccccccccccccccceEEEEEeCCceeeeeeecCcccCcceEEEcCCCCCcEEEEeeeeeEEEEecceEEeccCCCC Confidence 222221 234567778889865432222 22333456777532 22 22222 11 Q ss_pred -------ecceEEEEEeecc-hhhhcC Q lcl|Aclame:pro 549 -------GFGQVERITLSTS-MSEMPV 567 (567) Q Consensus 549 -------g~~~V~~i~la~s-~~EL~~ 567 (567) |..+++|+.+.-- -.++.| T Consensus 699 ~~~~~~~~rl~l~r~~~~~~~tg~~~~ 725 (801) T protein:vir:15 699 STATEDIGRLQLRRAWVNYEDSGAFTI 725 (801) T ss_pred CceeeeeccEEEEEEEEEeccCcceEE Confidence 1223344333211 112222 No 38 >protein:vir:1778 Length: 680 # NCBI annotation: tail protein A # Family: family:all:825 # MgeID: mge:38 # MgeName: P60 # Cross-refs: genbank:acc:NP_570344;genbank:gi:18640503;genbank:GeneID:932716 Probab=79.33 E-value=0.11 Score=25.94 Aligned_cols=418 Identities=13% Similarity=0.038 Sum_probs=147.1 Q ss_pred Cccceeehhhhc-cceeeccccccc---eeeeEEEecccccccCccchhcCcccccceEEeeeecCCeEeEeeccccccc Q lcl|Aclame:pro 1 MMPIAILANSII-NPLIFKPEAVKG---ISMPYIDITTMRGMMPRVVTSMLPEHSAVLAEDCHFRFGVITPERQISGVEK 76 (567) Q Consensus 1 ~~~~~~~~~~~~-~~~~~~~~~~~~---~~M~~I~i~~f~G~~pr~~p~lL~~~~a~~A~N~~~~~G~l~P~~~~~~v~~ 76 (567) ....+-|+-.+. .=-.|.=.+=.+ .-++.+++.. +|....-..+.+--+..=.-.+...+.+.-...+.- . T Consensus 213 ~~~~a~la~~l~~~~~~~~~~~g~~~~~~y~~~~~l~~-tg~~~~~~~~t~~v~~~G~~y~IsI~~~~~~~~~~~--~-- 287 (680) T protein:vir:17 213 NWNGTGLSFRVKVEARAFLVDDGEEYGHNYIPYVTLLT-PGNNTSPFPDTIRVDVSGEGWDIKVTKQIQSKVYAN--L-- 287 (680) T ss_pred eeeeeeeeeeeeeccceeeecCCCceEEEEeeEEEEec-CCccccccCceEEEecccceeEEEEccceeeEeccC--c-- Confidence 000000000000 000000000000 0011111110 111111000000000000000000111110000000 0 Q ss_pred cccccceEEEEECCceEEe---eCCeEEEeeC-C--CCCCCcceEEEcCCCeeeeeeccccccCCccccc-ccccccCCC Q lcl|Aclame:pro 77 TFTIKPKTIFHYRDDFWFA---WPDVVDVIRS-P--IAQDPHGRIYYTDGRFPKVTDATIATKGDGNHPT-SSYRLGIPA 149 (567) Q Consensus 77 ~~~~~~~Tif~~~~~~w~~---w~~~V~~~~s-p--ia~D~~~Rvy~tgd~~p~~t~~~iat~g~g~~p~-~~y~LgVpa 149 (567) .+...+|-......+|-. ..+.+..+-+ | .++--...+|+-....+..+...+-+.++..... ....-.|-. T Consensus 288 -~s~~~~t~~~~~a~~at~~~Ia~~L~~~i~~~~~~~~~~~g~~i~i~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~v~~ 366 (680) T protein:vir:17 288 -GTAQFTTPVDQSGGGASTSDIVTGLSAAINGLGTFTAESIGNVIRVRYSDPTRTDEFTMSARGGTSGTGLESIKYSVDT 366 (680) T ss_pred -cceeeeeccCCcccceeHHHHHHHHHHhhcccCcEEEEECCCEEEEEeccCCCceEEEeeccCCCCceeeeeeeeeecc Confidence 000000000000000000 0000000000 0 0000001122211111111111111111100000 000001111 Q ss_pred ----Ccccc---eeEe-cCCCCCCCCccccceeeEEEEEEEecCCCccCCcccceeEEEecCCCEEEEccccCCCCCCcc Q lcl|Aclame:pro 150 ----PTTAP---VCTV-QQGGDVSDDNPNDDETRFYTETFVSDYGEEGPPGPASLEVTLRTPGTAVQLTLAPVPLQNASI 221 (567) Q Consensus 150 ----P~~ap---~~~v-~~g~~~~g~~~~d~et~~Y~~TfVt~~GeES~pS~~S~~v~v~~~g~~V~L~~~p~~~~~~~i 221 (567) |+.+| .+.+ ..++ .+...|-+.|-..-+.+...++-+. ++..++|....+.. .. T Consensus 367 ~~~Lp~~a~~g~~v~v~~~~~---------~~~~~Yyv~~~~~~~~~~~~~~~~W-~E~~~~~~~~~~~~--------~t 428 (680) T protein:vir:17 367 LAELPTKCWNDYQVAVRNTQD---------TEVDDYYVKFETDVEDADVPGSGYW-VETVKNGDDGGLVD--------DT 428 (680) T ss_pred ccccccccCCCcEEEEEeCCC---------CcccceEEEEeccCcccCcccccce-eecccCcccceecc--------Cc Confidence 22222 1222 2222 2233466667333332332232222 22334453332221 12 Q ss_pred ceEEEEEEEcCCCCeeEEEEEeccCceeeEEeccCccccCcccchhhcc-CCCCCCceeeeecCcEEEEEECCEEEEecC Q lcl|Aclame:pro 222 KRRRIYRSASGGGEADFLLVAELDASVLSYTDKIPAKNLGPSLATWDYL-PPPENMTGLCLMANGIAAGFAGNEVMFSEA 300 (567) Q Consensus 222 t~~RIYRs~tggg~~e~~lVael~~st~sy~D~~~~~~Lg~~L~t~~~~-~Pp~~~~~l~~~~NG~l~~a~Gn~l~FSEp 300 (567) .-.+|||...+. -.|-.+. .......|.|....++.....|++.-. ..| ..+ .++++||.-+.++.||+|.+ T Consensus 429 mp~~l~r~~~g~--f~~~~~~-~~~~~~~~~~r~~Gdd~tnp~psF~~~G~~p---~~v-~f~q~RL~f~s~~~v~~Srt 501 (680) T protein:vir:17 429 MPHVLVRNALGD--FTFSSLN-NSSYGKTWADRSVGSEDTNPHPTFTESGNGI---YGM-FMYKNRLGFLTQDAVIMSQV 501 (680) T ss_pred ceEEEEEccCce--eEEEeec-cccccccccccccCCcccCCCcccccCCCCc---eEE-EEEcceEEEeeCCeEEEEcc Confidence 236899875432 1222221 122233565554444443333333210 112 123 58899998888999999999 Q ss_pred CCcccC-chh-------hceec------ccceEEEEEeCCeEEEEEcCcEEEEEcC----CcccceeEeecccCCccccc Q lcl|Aclame:pro 301 YLPYAW-PEV-------NRHTT------AEDIVAICPLGTSLVVATKGEPYLFSGV----SPSTISGSKIPSMQACLSRR 362 (567) Q Consensus 301 ~~Phaw-p~~-------y~~~~------~~~Iv~i~pv~~gl~V~T~~~py~lsG~----~p~~m~~~~l~~~~pcvs~~ 362 (567) -.++-| +.. .-+.+ ...|.-+.+++..|+++|.+.-|.++|. +|.+..+.+. ....|.+.- T Consensus 502 gd~~nF~~~t~~~~~DdD~I~~~~ss~~~~~i~~~v~~~~~L~l~t~g~q~~ls~~~~~lTP~~~~i~~~-s~~~~~~~~ 580 (680) T protein:vir:17 502 GDYFNFYATSGVTISDADPIDMATSDTKPVKLEAAISSTSGAILFGNQAQFRLSSPDESFGPKTATLDKI-SNYTYESKA 580 (680) T ss_pred CCcccccccccccCCCCccEEEEEcCCcceeeeEEeecCCcEEEEecCeEEEEecCCceecceeEEEEEE-EeecccCCC Confidence 888886 432 12322 2567778999999999999999999984 4555444432 333576667 Q ss_pred ceeecCceEEEecCCcEE-EEcCCceeEeecccccchhHHhhhcCcccEEEEEE-cC-eEEEEEecCCCcceeEEEccCC Q lcl|Aclame:pro 363 SMVAMEGFVLYAGTNGLV-SVDANGNVALATEQIVSPEQWQSQFNPASIVAYPW-RG-EYIACYTKPDGKQDVFVFSPVN 439 (567) Q Consensus 363 siv~~~~~v~y~s~dGlv-~~~~~G~~~~vt~~~~~~~~W~~~l~P~ti~a~~~-~G-~Y~~~y~~~~g~~~~~ifd~~~ 439 (567) ..+..++.++|+++.|=. .+. .-.....+.+--. +..|+++-.+ +| ..... -+. T Consensus 581 ~Pv~vG~~v~Fv~~~g~~s~vr-e~~y~~~~d~y~a--------~DlT~~a~hl~~g~v~~~~-----------~~~--- 637 (680) T protein:vir:17 581 DPVQTGVSMIFPTNMGTYSSVY-ELSTESAKGTPVI--------EDSSRVIPRLIPSGLTWST-----------ASM--- 637 (680) T ss_pred CceEeCCeEEEeecCCCcceEE-EEeeeeccCceeh--------hhHHHHHHHhcCCceEEEE-----------eeC--- Confidence 788899999999998721 110 0011122222111 2222222111 11 11110 000 Q ss_pred ceeEEEeeeeeEEEEEecCCeEEEEe------CCEEEEEcC---CCCce Q lcl|Aclame:pro 440 MDIRYLSTPFDCAWVDLAKDMMRVVT------GDKMSVLAG---GALPS 479 (567) Q Consensus 440 ~~~~~~~~~~~a~~~~~~~d~ly~~~------g~~i~~~~~---g~~~~ 479 (567) ..+.-.++.+..+++||..+ .+++.-|.. +.+.+ T Consensus 638 ------~~~~~~~~~~~~~~~l~~~~yl~~~~e~~v~aW~rw~~~~~d~ 680 (680) T protein:vir:17 638 ------NNDTVFFGNAKKGRNVYVFRFFNEGQERKVAGWTTWYYEDQDH 680 (680) T ss_pred ------CCCeEEEEEEcCCCEEEEEEEeeCCCceEEEEEEEEecCCCCC Confidence 11223344455666776653 345777763 22324 No 39 >protein:vir:102823 Length: 470 # NCBI annotation: major structural protein # Family: family:all:2450 # MgeID: mge:1610 # MgeName: YS40 # Cross-refs: genbank:acc:YP_874086;genbank:gi:118197693;genbank:GeneID:4496015 Probab=79.08 E-value=0.11 Score=25.88 Aligned_cols=256 Identities=13% Similarity=0.097 Sum_probs=89.4 Q ss_pred Cccce-------eehhhhccceeecccc-c---cceeeeEEEecccccccCccchhcCcccccceEEeeeecCCeEeEee Q lcl|Aclame:pro 1 MMPIA-------ILANSIINPLIFKPEA-V---KGISMPYIDITTMRGMMPRVVTSMLPEHSAVLAEDCHFRFGVITPER 69 (567) Q Consensus 1 ~~~~~-------~~~~~~~~~~~~~~~~-~---~~~~M~~I~i~~f~G~~pr~~p~lL~~~~a~~A~N~~~~~G~l~P~~ 69 (567) --|=- -|.-++|| +-++ | +|++|+.=-.- =-|-.--+.-++||..--.+.-| +|... T Consensus 173 ~~~~NViDarG~~Ls~~~L~----~aa~~I~~~~~fGt~TD~~l-p~~vka~f~~~~~~~qRv~~~~N----~~~~~--- 240 (470) T protein:vir:10 173 GAPQNVLDAGGRPLSIDLLW----EAESRVVSTQAFANPTAVFI-SYVDKLNLQASFYQISRVMTTAD----RRAGL--- 240 (470) T ss_pred CCCccccccCCCCccHHHHH----HHHhhhcccccccChhhhcc-chhHHHHHHHhhcCceEEEEecC----CCcee--- Confidence 00000 00111111 1110 1 23333310000 00111223333343322222211 11111 Q ss_pred ccccccccccccceEEEEECCceEEeeCCeEEEeeCCCCCCCcceEEEcCCCeeeeeeccccccCCcccccccccccCCC Q lcl|Aclame:pro 70 QISGVEKTFTIKPKTIFHYRDDFWFAWPDVVDVIRSPIAQDPHGRIYYTDGRFPKVTDATIATKGDGNHPTSSYRLGIPA 149 (567) Q Consensus 70 ~~~~v~~~~~~~~~Tif~~~~~~w~~w~~~V~~~~spia~D~~~Rvy~tgd~~p~~t~~~iat~g~g~~p~~~y~LgVpa 149 (567) ......-+....|+.|| =+|=+.+| +. |...+.+. .... .++| T Consensus 241 --------~G~~v~~f~sa~G~I~L--------~~s~~m~~---------~~--k~~p~~l~---~~v~-------~~aA 283 (470) T protein:vir:10 241 --------LGADAQSYIGVRGEHSL--------YPSQFLGD---------FH--KFNPARFG---AEVG-------DFAA 283 (470) T ss_pred --------eeeeccceeeeeeeeee--------cccccccc---------hh--hcCcccCC---cccC-------Cccc Confidence 11233334444566666 11111111 00 10101110 0110 1234 Q ss_pred CcccceeEecCCCC-----CCCCccccceeeEEEEEEEecCCCccCCcccceeEEEecCCCEEEEccccCCCCCCccceE Q lcl|Aclame:pro 150 PTTAPVCTVQQGGD-----VSDDNPNDDETRFYTETFVSDYGEEGPPGPASLEVTLRTPGTAVQLTLAPVPLQNASIKRR 224 (567) Q Consensus 150 P~~ap~~~v~~g~~-----~~g~~~~d~et~~Y~~TfVt~~GeES~pS~~S~~v~v~~~g~~V~L~~~p~~~~~~~it~~ 224 (567) |....++....+.. .......+.+.+.|.|..+..+|+ |+++-++...++..-+..|.|....+. ++..+ T Consensus 284 P~~~~tv~~t~~~~a~~~~sk~g~~~~~~v~sy~y~v~~~~gd-s~s~~v~vt~t~~~v~kgv~ltI~~~~----~v~yv 358 (470) T protein:vir:10 284 PSNSWTVSTTDNFVTLPYNSGLGDPANTTVYSYAFKAANFYGE-SAAKYIDVYIDSTEAGKGVRFQFHGLV----NVKWL 358 (470) T ss_pred CceeEEeecCCCceeecccCCCCcccCcceeEEEEEEEEecCC-CCcceEEEEEeeehhcceeEEEEecCC----CCcEE Confidence 43222221111110 001112345567899999999874 444434334444445666776654322 36789 Q ss_pred EEEEEEcCCCCeeEEEEEecc-----CceeeEEeccCc------c----------ccCcc---cchhhccCCCCCCceee Q lcl|Aclame:pro 225 RIYRSASGGGEADFLLVAELD-----ASVLSYTDKIPA------K----------NLGPS---LATWDYLPPPENMTGLC 280 (567) Q Consensus 225 RIYRs~tggg~~e~~lVael~-----~st~sy~D~~~~------~----------~Lg~~---L~t~~~~~Pp~~~~~l~ 280 (567) .|||+..++ ++|++++.++ ...+.|.|.-.. . -+++. --+..|..|++=+|.-. T Consensus 359 ~IYRk~~~s--~~~~li~rv~v~~~ng~~~~~~D~~e~i~tt~~v~~~~~~Pgt~~Vgemsp~v~sl~~~l~m~l~klp~ 436 (470) T protein:vir:10 359 DVYRKDPGS--QEYKFYKRVKVSTVNGDFTWIDDGHETVTTPSGVYRWKKIPGTGVVVGIDPNVTTMAVWIGMELYRLPP 436 (470) T ss_pred EEEeecCCC--CceeEEEEEeeeeccCCEEEEecccccCCCcceeeeecccCcceeccccCcchhhhhhhhhhhhhhcCH Confidence 999996554 6899999998 444456554110 0 11211 12333444442222110 Q ss_pred eecCcEEEEEECCEEEEecCCCccc-Cchhh-ceecccceEEEEEe Q lcl|Aclame:pro 281 LMANGIAAGFAGNEVMFSEAYLPYA-WPEVN-RHTTAEDIVAICPL 324 (567) Q Consensus 281 ~~~NG~l~~a~Gn~l~FSEp~~Pha-wp~~y-~~~~~~~Iv~i~pv 324 (567) +.-|-+ ++|-.+.. ++ -|+|+ ++.. |.-+..+ T Consensus 437 a~~~~~--------v~~~vgal-al~aPKr~~~IkN---V~~~~~~ 470 (470) T protein:vir:10 437 ALTHDY--------VIWKVASV-FSRAPEFNFLIVN---VGQEPIV 470 (470) T ss_pred HHHHHH--------HHHHHHHH-HHhccccceEEEE---eeeeecC Confidence 000000 00100111 11 15553 2211 2212112 No 40 >protein:vir:94713 Length: 785 # NCBI annotation: tail tube # Family: family:all:825 # MgeID: mge:1528 # MgeName: K1F # Cross-refs: genbank:acc:YP_338122;genbank:gi:77118200;genbank:GeneID:3707736 Probab=68.68 E-value=0.23 Score=24.05 Aligned_cols=521 Identities=12% Similarity=0.118 Sum_probs=196.9 Q ss_pred eeEE--EecccccccCccchhcCcccccceEEeeee-cCCeEeEeeccccccccc-cccc-eEEEEE--C--CceEEeeC Q lcl|Aclame:pro 27 MPYI--DITTMRGMMPRVVTSMLPEHSAVLAEDCHF-RFGVITPERQISGVEKTF-TIKP-KTIFHY--R--DDFWFAWP 97 (567) Q Consensus 27 M~~I--~i~~f~G~~pr~~p~lL~~~~a~~A~N~~~-~~G~l~P~~~~~~v~~~~-~~~~-~Tif~~--~--~~~w~~w~ 97 (567) |+.| .|+.|.|=+=+=.+-+==.+|+..+.|+-. -.|.|+-+.+-..++... .... .-+|.+ . +.+.+.+. T Consensus 1 M~~~~~s~~n~~~GvSqq~D~~ry~~q~~~~~N~~~~~~gG~~rRpG~~~v~~l~~~~~~~~~~~~f~~~~~~~y~l~~~ 80 (785) T protein:vir:94 1 MPLITQSIKNLKGGISQQPDILRFSDQGEAQVNCWSSESDGLQKRPPTVFKRRLNIDVGSNPKFHLINRDEQEQYYIVFN 80 (785) T ss_pred CcceeeecchhhcceecCCchHHhhhHHhhhhcceeeeccCcccCChhHhhhcccCCCCcCcEEEEEEeCCCceEEEEEc Confidence 6655 355565554333333334789999999988 678888777766665432 1111 112222 1 22444433 Q ss_pred C-eEEEe---------eCCC----CCCCc---------ceEEEcCCCeeeeeecc-cc-----------ccCCccccccc Q lcl|Aclame:pro 98 D-VVDVI---------RSPI----AQDPH---------GRIYYTDGRFPKVTDAT-IA-----------TKGDGNHPTSS 142 (567) Q Consensus 98 ~-~V~~~---------~spi----a~D~~---------~Rvy~tgd~~p~~t~~~-ia-----------t~g~g~~p~~~ 142 (567) . .+.+. ..+. +.++- .-+|++.-.+|.-.... .+ ...++.+. .. T Consensus 81 ~~~irv~~~~G~~~~v~~~~~y~~~~~~~~~l~~~q~aD~~fi~n~~~~~~~~~~~~~~~~~~~~~~~~~i~~g~y~-~~ 159 (785) T protein:vir:94 81 GSNIQIVDLSGNQYSVSGSVDYVKSSNPRDDIRVVTVADYTFVVNRKVVVKGGSEKSHSGYNRKARALINLRGGQYG-RT 159 (785) T ss_pred CCeEEEEecCCcEEEEecCCCceeecCchhheeeEeeCCEEEEEcCCcceeeeeccCCcCCCCCCceEEEecccccc-ee Confidence 1 22222 1111 10110 13444432222211100 00 00111111 11 Q ss_pred ccccCCCCcccceeEecCCCCCCCC-ccccc---------------------eeeEEEEEEEec----CCCccCCccc-c Q lcl|Aclame:pro 143 YRLGIPAPTTAPVCTVQQGGDVSDD-NPNDD---------------------ETRFYTETFVSD----YGEEGPPGPA-S 195 (567) Q Consensus 143 y~LgVpaP~~ap~~~v~~g~~~~g~-~~~d~---------------------et~~Y~~TfVt~----~GeES~pS~~-S 195 (567) |.+.+..-..+ ...+..+...... ...+. ....|.+-.... ...+...+.. + T Consensus 160 y~i~i~g~~~a-t~~t~~~s~a~~s~~~~s~~~i~~~l~~~l~a~~t~~t~~~~g~~i~i~a~s~t~~~~~s~~~~~~~t 238 (785) T protein:vir:94 160 LKVGINGGVKV-SHKLPAGNDAENDPPKVDAQAIGAALRDLLVTAYPTFTFDLGSGFLLITAPSGTDINSVETEDGYANQ 238 (785) T ss_pred EEEeeCCccee-EEEEccCccccccccccchHHHHHHHHHHhhccccceeEEecCcEEEEEecCCccccceeeecccCCe Confidence 23333221111 0011111110000 00000 001111111100 0111111100 0 Q ss_pred eeEEEecCCCEEEE-cccc-CCCCCCccceEEEEEEEcCC-CCeeEEEEEeccCce----------eeEEeccCccccC- Q lcl|Aclame:pro 196 LEVTLRTPGTAVQL-TLAP-VPLQNASIKRRRIYRSASGG-GEADFLLVAELDASV----------LSYTDKIPAKNLG- 261 (567) Q Consensus 196 ~~v~v~~~g~~V~L-~~~p-~~~~~~~it~~RIYRs~tgg-g~~e~~lVael~~st----------~sy~D~~~~~~Lg- 261 (567) ..+.+.. .++. ..+| ..+.| ..++| +.+++ +..+|++-.+-..+. ..+....-...|. T Consensus 239 ~~~~~~~---~~~~~~~Lp~~~~~G---~~v~v--~~~~~~~~~~y~v~~~~~~g~w~e~~~~g~~~~~~~~tmp~~l~~ 310 (785) T protein:vir:94 239 LISPVLD---TVQTISKLPLAAPNG---YIIKI--QGETNSSADEYYVMYDSNTKTWKETVEPGVVTGFDNTTMPHALVR 310 (785) T ss_pred EEEEEEe---eccceeccccccCCC---CEEEE--EccCCCCccceEEEEEcCCceEEEecccceeeeeeccccceEEEe Confidence 0000000 1111 1111 11111 11111 11111 112232222111110 0000000000000 Q ss_pred c-----ccchhhcc----------CCCC-CCce--eeeecCcEEEEEECCEEEEecCCCcccC-chh-------hceec- Q lcl|Aclame:pro 262 P-----SLATWDYL----------PPPE-NMTG--LCLMANGIAAGFAGNEVMFSEAYLPYAW-PEV-------NRHTT- 314 (567) Q Consensus 262 ~-----~L~t~~~~----------~Pp~-~~~~--l~~~~NG~l~~a~Gn~l~FSEp~~Phaw-p~~-------y~~~~- 314 (567) . .+...+|. +.|. .++. -+.++++||.-+.++.||+|.+-.++-| +.. .-+.+ T Consensus 311 ~~~~~~~~~~~~w~~r~~Gd~~tnp~psf~g~~~~~v~f~q~RL~f~~~~~v~~Srtgd~~nF~~~t~~~~~DdD~i~~~ 390 (785) T protein:vir:94 311 QSDGSFEFKALDWSKRGAGNDDTNPMPSFVDATINDVFFYRNRLGFLSGENVIMSRSASYFAFFPKSVATLSDDDPIDVA 390 (785) T ss_pred ccCCceEEeccccccccCCCcccCCcceecccccceEEEEeceEEEecCCeEEEEccCCcccCccccccCCCCCccEEEE Confidence 0 01111121 1110 0111 2358899998888999999999888887 431 22333 Q ss_pred -----ccceEEEEEeCCeEEEEEcCcEEEEEcC---CcccceeEeecccCCcccccceeecCceEEEecCCcE------- Q lcl|Aclame:pro 315 -----AEDIVAICPLGTSLVVATKGEPYLFSGV---SPSTISGSKIPSMQACLSRRSMVAMEGFVLYAGTNGL------- 379 (567) Q Consensus 315 -----~~~Iv~i~pv~~gl~V~T~~~py~lsG~---~p~~m~~~~l~~~~pcvs~~siv~~~~~v~y~s~dGl------- 379 (567) ...|.-+.+++.+|+++|.+.-|.|+|. +|.+..+.+. ..-.|.+.-..+..++.++|+++.|= T Consensus 391 ~~~~~~~~i~~~v~~~~~L~l~T~~~e~~l~~~~~lTP~~~~~~~~-s~~~~~~~~~Pv~vg~~v~f~~~~g~~~~v~r~ 469 (785) T protein:vir:94 391 VSHPRISILKYAVPFSEQLLLWSDEVQFVMTSSGVLTSKSIQLDVG-SEFALGDNARPFAVGRSVFFSAPRGSFTSIKRY 469 (785) T ss_pred ecCCcceeeEEEeecCCcEEEEecCcEEEEcCCCcccceeEEEEEE-EeeeccCCCCceEeCCeEEEEecCCCeeEEEee Confidence 2557778899999999999999999986 4555444332 33357777778889999999999882 Q ss_pred -EEE-cCC-ceeEeecc---cccchhHHhhhcCcccEEEEEEcCeEEEEEecCCCcceeEEEc--cCCcee---EEEeee Q lcl|Aclame:pro 380 -VSV-DAN-GNVALATE---QIVSPEQWQSQFNPASIVAYPWRGEYIACYTKPDGKQDVFVFS--PVNMDI---RYLSTP 448 (567) Q Consensus 380 -v~~-~~~-G~~~~vt~---~~~~~~~W~~~l~P~ti~a~~~~G~Y~~~y~~~~g~~~~~ifd--~~~~~~---~~~~~~ 448 (567) ... ..+ -++.-+|. .+|... .-.+.|.+-+..=+.+.+..+|+--++-|. -..+.+ .++++. T Consensus 470 ~~~~~~~d~y~~~dlt~~~~~~~~g~-------~~~~~a~~~~~~~~~~~~~~~g~l~~~~y~~~~~e~~v~aW~r~~~~ 542 (785) T protein:vir:94 470 FAVADVSDVKDADDTTGHVLSYIPNG-------VFDIQGTGTENYICVNSTGAYNRIYIYKFLFKDSVQLQASWSHWEFP 542 (785) T ss_pred eeecccccceehhhHHHHHHHhcCCC-------cEEEEEecCCCcEEEEEEcCCCEEEEEEEeecCCceEEEEEEEEEeC Confidence 111 111 11222221 121110 001233333332233333333322222221 122211 222221 Q ss_pred --eeEEEEEecCCeEEEEe----CCEEEEEc--C--CCCc-eeEEE--Eee-eEEcCCCC--------ceeEEEEeeC-- Q lcl|Aclame:pro 449 --FDCAWVDLAKDMMRVVT----GDKMSVLA--G--GALP-STIRW--HSK-IFSLPERT--------SFSCIRVKSP-- 504 (567) Q Consensus 449 --~~a~~~~~~~d~ly~~~----g~~i~~~~--~--g~~~-~~~~W--rSK-~f~~~~~~--------~f~~~~V~~~-- 504 (567) +-..+.....|.||++. |..+...+ . ...+ .++++ -++ .+..+... .+..-.++.. T Consensus 543 ~~~~~~~~~~~~d~~~~vv~r~~g~~~~~ie~~~~~~d~~~~~~~~~lD~~~~~~~~~~~~~~~~~~t~~~~~~~~~g~~ 622 (785) T protein:vir:94 543 KDDKILASASIGSTMFIVRQHQGGVDIEHLKFIKEATDFPSEPYRLHVDSKVSMVIPIGSFNADTYKTTVDIGAAYGGNA 622 (785) T ss_pred CCeEEEEEEEeCCEEEEEEEcCCCEEEEEEEeecccCCCCCcceeEEeeeeeEEEecCcceeccccccccccccccccCC Confidence 12233344589999874 22333332 1 1111 11111 111 11111111 1111111111 Q ss_pred CcCceEEEEEECCeeeEeecCcccCCcceEcCCcc---------cceEEEE-----EE------------ecceEEEEEe Q lcl|Aclame:pro 505 APERVGITIMADDVPVIHFAPGTFKGSVVRLPAAT---------GQNWQVM-----VS------------GFGQVERITL 558 (567) Q Consensus 505 ~~~~~~~~i~~d~~~~~~~~~~~~~~~~~RLP~~~---------~~~wqie-----i~------------g~~~V~~i~l 558 (567) ..+-..+.+.+||... ...........+++|+.+ .-..+|| +. |..+++|+.+ T Consensus 623 ~leg~~v~v~adG~~~-~~~~v~~~~~tl~~~g~~~~~~v~vGl~y~~~~~~~~~~~~~~~~~~~~~~~~gr~~l~r~~~ 701 (785) T protein:vir:94 623 PSPGRYYLIDSQGAYL-DLGELTSISTVITLNGDWSGRTVFIGRSYLMSYKFSRFLIKIEDDSGTQSEDTGRLQLRRAWV 701 (785) T ss_pred ccCCeEEEEeeCCcCc-cCceEcCCCcEEEecCCCCCceEEEeeeeeEEEeecceeEEecCCCcccccccccEEEEEEEE Confidence 1223456678888653 323333444577887432 2223333 11 2234555443 Q ss_pred e--cchhhhcC Q lcl|Aclame:pro 559 S--TSMSEMPV 567 (567) Q Consensus 559 a--~s~~EL~~ 567 (567) . .| .++.| T Consensus 702 ~~~~s-g~~~v 711 (785) T protein:vir:94 702 NYRDT-GALRL 711 (785) T ss_pred Eeecc-cceEE Confidence 2 22 22222 No 41 >protein:vir:94583 Length: 792 # NCBI annotation: Tubular tail protein B # Family: family:all:825 # MgeID: mge:1516 # MgeName: Berlin # Cross-refs: genbank:acc:YP_919014;genbank:gi:119637778;genbank:GeneID:5179343 Probab=67.39 E-value=0.25 Score=23.86 Aligned_cols=526 Identities=10% Similarity=0.065 Sum_probs=192.0 Q ss_pred eeEE--EecccccccCccchhcCcccccceEEeeee-cCCeEeEeeccccccccc---cccce-EEEEE--C-C-ceEEe Q lcl|Aclame:pro 27 MPYI--DITTMRGMMPRVVTSMLPEHSAVLAEDCHF-RFGVITPERQISGVEKTF---TIKPK-TIFHY--R-D-DFWFA 95 (567) Q Consensus 27 M~~I--~i~~f~G~~pr~~p~lL~~~~a~~A~N~~~-~~G~l~P~~~~~~v~~~~---~~~~~-Tif~~--~-~-~~w~~ 95 (567) |+.| .|+.|.|=+=+=.+-+-=.+|+..+.|+-. -.|.|+-+-+-.-++... ....+ -++.+ . . .+-+. T Consensus 1 M~~i~~s~~n~~~GiSqq~D~~ry~~q~~~~~N~~~~~~gG~~rRpG~~fv~~l~~~~~~~~~~~l~~~~~~~~q~y~l~ 80 (792) T protein:vir:94 1 MALISQSVKNLKGGISQQPNILRFPEQGSEQINGWSSETEGLQKRPPFVFTKTIGDQNALGAKPLVHLINRDSAEQYYVV 80 (792) T ss_pred CcceeeecchhhcceecCcchHHhhhhhhhhhcceeeeccccccCChhHHHHhhhcCCCCCcccEEEEEEeCCCceEEEE Confidence 6665 456665543222233333688999999987 567777666644443211 11111 12222 1 1 22222 Q ss_pred --------eC-CeEE-EeeCCC----CCCCc---------ceEEEcCCCeeeeeecc------------ccccCCccccc Q lcl|Aclame:pro 96 --------WP-DVVD-VIRSPI----AQDPH---------GRIYYTDGRFPKVTDAT------------IATKGDGNHPT 140 (567) Q Consensus 96 --------w~-~~V~-~~~spi----a~D~~---------~Rvy~tgd~~p~~t~~~------------iat~g~g~~p~ 140 (567) |+ +... .+..+. +.++- ..+|++.-.+|.-.... +.. -+|.+- T Consensus 81 f~~~~~rv~~~~g~~~~~~~~~~y~~~~~~~~~l~~~q~aD~~fi~n~~~~~~~~~~~~~~~~~~~~~~v~i-~~g~y~- 158 (792) T protein:vir:94 81 FTGQGVRVFDLNGKEYDVKGDLSYVKVENPRDDLRMVTVADYTFIVNRNMVVRPDTTPLYTLKENGDCLINI-RGGMYG- 158 (792) T ss_pred EcCCeEEEEecCCceEEecccCceeeecCCcceeEEEEEcCEEEEEeCCccceeEecCcCCCCCCceEEEEc-cCCCcc- Confidence 32 2111 111111 11111 13555543333211100 000 111111 Q ss_pred ccccccCCC---------CcccceeEecCCCCCCCCc----cccc------eeeEEEEEEEecC--------CCccCCcc Q lcl|Aclame:pro 141 SSYRLGIPA---------PTTAPVCTVQQGGDVSDDN----PNDD------ETRFYTETFVSDY--------GEEGPPGP 193 (567) Q Consensus 141 ~~y~LgVpa---------P~~ap~~~v~~g~~~~g~~----~~d~------et~~Y~~TfVt~~--------GeES~pS~ 193 (567) ..|++.+.. ++++..+....+...+... +.+. -...-.|.++++. +.|...+. T Consensus 159 ~~y~i~i~~~~~~~~~~~~t~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~g~~~ 238 (792) T protein:vir:94 159 RTLAFTINNTKIAYEIAHGDAPEHSKQTDAQWLVKKLAGLARLNVAFKGWTFTEGPGYIHVIAPSNSQINSLSTEDGYAD 238 (792) T ss_pred eeEEEEecCceeeeeeecCcccceecccchhhhhhhhhhhccccccccccEEEECCeEEEEEecCCceeeeeecccCcCc Confidence 112333322 1111110000000000000 0000 0000011122211 11111110 Q ss_pred -cceeEEEecCCCEEEEccccCCCCCCccceEEEEEEEcCCCCeeEEEEEeccCce----------eeEEeccCccccCc Q lcl|Aclame:pro 194 -ASLEVTLRTPGTAVQLTLAPVPLQNASIKRRRIYRSASGGGEADFLLVAELDASV----------LSYTDKIPAKNLGP 262 (567) Q Consensus 194 -~S~~v~v~~~g~~V~L~~~p~~~~~~~it~~RIYRs~tggg~~e~~lVael~~st----------~sy~D~~~~~~Lg~ 262 (567) ....+ ...++.. ...|....+-..++|--+. +.+..+|++..+-..+. ..+....-...+-+ T Consensus 239 ~~~~~~-----~~~v~~~-~~lp~~~~~G~~v~i~~~~-~~~~d~y~v~~~~~~~~w~E~~~~~~~~~~~~~tmp~~lv~ 311 (792) T protein:vir:94 239 QLMNAV-----MHTSQSF-SRLPVEAPNGYTVKIVGDT-SKTSDMFYVQYDNMKKVWKEVAGWGVQKGLNGGTMPHALVR 311 (792) T ss_pred ceeeee-----eeccccc-ccccccCCCCcEEEEEccC-CCCccceEEEEEcCCceEEEecccceeeeecccccCeeEEE Confidence 00000 0011111 1111211222234443211 11223344333211100 00000000000000 Q ss_pred ------ccchhhccC---------CCCC--C---ceeeeecCcEEEEEECCEEEEecCCCcccC-chh-------hceec Q lcl|Aclame:pro 263 ------SLATWDYLP---------PPEN--M---TGLCLMANGIAAGFAGNEVMFSEAYLPYAW-PEV-------NRHTT 314 (567) Q Consensus 263 ------~L~t~~~~~---------Pp~~--~---~~l~~~~NG~l~~a~Gn~l~FSEp~~Phaw-p~~-------y~~~~ 314 (567) .+...+|.. |.++ . ..+ .++++||.-+.++.||+|..-.++-| +.. .-+.+ T Consensus 312 ~~~~~~~~~~~~w~~r~~gd~~tnp~psf~g~~i~~v-~f~q~RL~f~~~~~v~~Srtgd~~nF~~~t~~~~~DdD~I~~ 390 (792) T protein:vir:94 312 QADGSFQMQVLPWTQRTCGDMDTNPTPSIVDQKINDV-FFFRNRLGFLAGENIVMSRTSKYFSLFPASVANLSDDDPIDV 390 (792) T ss_pred cCCCcEEEEeccccccccCccccCccceeccCCcceE-EEEcceEEEecCCeEEEEccCCcccCccccccCCCCCccEEE Confidence 011111221 1111 1 223 58899999999999999999988887 432 12222 Q ss_pred ------ccceEEEEEeCCeEEEEEcCcEEEEEcC---CcccceeEeecccCCcccccceeecCceEEEecCCcEE---EE Q lcl|Aclame:pro 315 ------AEDIVAICPLGTSLVVATKGEPYLFSGV---SPSTISGSKIPSMQACLSRRSMVAMEGFVLYAGTNGLV---SV 382 (567) Q Consensus 315 ------~~~Iv~i~pv~~gl~V~T~~~py~lsG~---~p~~m~~~~l~~~~pcvs~~siv~~~~~v~y~s~dGlv---~~ 382 (567) ...|.-+.+++.+|+++|.+.-|.|+|. +|.+.++.+ ...-.|.+.-..+..++.++|+++.|=. .- T Consensus 391 ~~ss~~~~~i~~~v~~~~~L~l~T~~~q~~l~~~~~lTP~~~~i~~-~s~~~~~~~~~Pv~vG~~v~Fv~~~g~~~~v~r 469 (792) T protein:vir:94 391 AVSHNRISILKYAVPFSEELLLWSDQAQFVLSAQGILSPKSVELNL-TTEFDVSDRARPFGVGRGVYFASPRASYTSLNR 469 (792) T ss_pred EecCCcceeeeEEeecCCcEEEEecCcEEEEeCCCcccceeEEEEE-EEEeeccCCCCceEeCCeEEEeecCCCeeEEEe Confidence 2556668899999999999999999986 455544332 2333576667778899999999999821 10 Q ss_pred -cCCceeEeecccccchhHHh--hhcCccc---EEEEEEcCeEEEEEecCCCcceeEEEc--cCCcee-EEEeeeee--- Q lcl|Aclame:pro 383 -DANGNVALATEQIVSPEQWQ--SQFNPAS---IVAYPWRGEYIACYTKPDGKQDVFVFS--PVNMDI-RYLSTPFD--- 450 (567) Q Consensus 383 -~~~G~~~~vt~~~~~~~~W~--~~l~P~t---i~a~~~~G~Y~~~y~~~~g~~~~~ifd--~~~~~~-~~~~~~~~--- 450 (567) .+. +-.+++--+.|.-+ ..+=|.. +.|..-+..=+.+.+..+++--++-|. -.++.+ -++...++ T Consensus 470 ~~~~---~~~~d~y~a~DlT~~~~hl~~~~v~~~~a~~~~~~~vv~~~~~~g~l~~~ty~~~~~e~~v~aW~~~~~~g~~ 546 (792) T protein:vir:94 470 YYAV---QDVSSVKSAEDMSAHVPNYIPNGVFSIRGSSTENFISVLSSNAPSRIFLYKFLYLNEEIAQQSWSHWELGSNV 546 (792) T ss_pred eeee---ccccCceehhhHHHHHHHhcCCceEEEEEeCCCCcEEEEEEcCCCeEEEEEEeecCCceEEEeEEEEEcCCcE Confidence 000 00111111111110 0011111 233334444344444434432233331 122211 23333232 Q ss_pred -EEEEEecCCeEEEEeCC----EEEEEc----C----CCCceeEEEEee-eEEcCCCC-----cee---EEEEe-eCCcC Q lcl|Aclame:pro 451 -CAWVDLAKDMMRVVTGD----KMSVLA----G----GALPSTIRWHSK-IFSLPERT-----SFS---CIRVK-SPAPE 507 (567) Q Consensus 451 -a~~~~~~~d~ly~~~g~----~i~~~~----~----g~~~~~~~WrSK-~f~~~~~~-----~f~---~~~V~-~~~~~ 507 (567) .+-.+...|+||++-.+ .+.+++ . ++ +.....-+| .+..+... .+. ..-+. .+..+ T Consensus 547 ~~~~~~~~~D~l~~~v~r~~~~~~~r~~~~~~~~d~~~~-~~~~~lD~~~~~~~~~~~~~~~~~~T~~~~~~~~gl~~l~ 625 (792) T protein:vir:94 547 TVLACDSIGSTMYLVLRNQSHTWMCRAHFTKNSIDFPDE-PYRLYIDNKVKYVIPEGSYNDDTYATTVKPVDVYGMKYWT 625 (792) T ss_pred EEEEEeecCCEEEEEEEeCCCEEEEEEEEeecccccCCC-cceeeeeeeeeEEecCcceecCceeeeeccccccCccccc Confidence 22224457999986421 223221 1 11 111112222 22222211 000 11111 11123 Q ss_pred ceEEEEEECCeeeEeecC-cc--cCCcceEcCCcc-cceEEE------EEE--------------------ecceEEEEE Q lcl|Aclame:pro 508 RVGITIMADDVPVIHFAP-GT--FKGSVVRLPAAT-GQNWQV------MVS--------------------GFGQVERIT 557 (567) Q Consensus 508 ~~~~~i~~d~~~~~~~~~-~~--~~~~~~RLP~~~-~~~wqi------ei~--------------------g~~~V~~i~ 557 (567) --.+.+.+||.......+ .. .....++||+.+ +..-+| +++ |..+++|+. T Consensus 626 G~~v~v~~dG~~~~~~~~~~~~~~~~~~i~~~g~~~a~~v~VGl~y~~~~~~~~~~~~~~~g~~~~~~~~~gr~rl~r~~ 705 (792) T protein:vir:94 626 GKFYIVASDGLVSWFEPPRGGWPNGVPMLTMSGNREGETIYVGLAISFRYVFSKFLIKKTADDGSIATEDIGRLQLRRAW 705 (792) T ss_pred CcEEEEEecCceeEeecccceecCCccEEEecCCccCCeEEEeeeeeEEEEeccceeeccCCCcCccccceeeEEEEEEE Confidence 344566788854321111 11 112246666542 222111 111 122333332 Q ss_pred eecch-hhhcC Q lcl|Aclame:pro 558 LSTSM-SEMPV 567 (567) Q Consensus 558 la~s~-~EL~~ 567 (567) +.--. .++.| T Consensus 706 ~~~~~tg~~~v 716 (792) T protein:vir:94 706 VNYEDSGAFTV 716 (792) T ss_pred EeeeccceeEE Confidence 22111 11111 No 42 >protein:vir:100022 Length: 976 # NCBI annotation: T7-like tail tubular protein B # Family: family:all:825 # MgeID: mge:1604 # MgeName: P-SSP7 # Cross-refs: genbank:acc:YP_214208;genbank:gi:61806431;genbank:GeneID:3294702 Probab=63.72 E-value=0.31 Score=23.35 Aligned_cols=536 Identities=13% Similarity=0.079 Sum_probs=193.1 Q ss_pred Ccccee----------------------------ehhhhccceeeccccccceeeeEEEeccc-ccccCccchhcCcccc Q lcl|Aclame:pro 1 MMPIAI----------------------------LANSIINPLIFKPEAVKGISMPYIDITTM-RGMMPRVVTSMLPEHS 51 (567) Q Consensus 1 ~~~~~~----------------------------~~~~~~~~~~~~~~~~~~~~M~~I~i~~f-~G~~pr~~p~lL~~~~ 51 (567) +-++.. ...+..+.+ .+-.++..+++-.+ .|...-+++.--...+ T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~s~~~G~------~~~~~~v~~~~f~~~~G~~~~i~~~~~~~~~ 260 (976) T protein:vir:10 187 VTRIDVELIKSSNNYCDSNGAMVARTSRPSNSTRCDDSAGDGR------DAYAPNVGTKVFNVTDGASLTDEANSGSYTY 260 (976) T ss_pred eeeeeeccccCCcccccccccchhhHhHhhhhhcccccccccc------cccCceeeeeEEEeccCccceEcCCcceEEE Confidence 111111 111111211 11223333333221 2343333322211111 Q ss_pred ---cceEEeeeecCCeEeEeeccccccccccccceEEEEECCceEEeeCCeEEEeeCCCCCCCcceEEEcC-CCeeeeee Q lcl|Aclame:pro 52 ---AVLAEDCHFRFGVITPERQISGVEKTFTIKPKTIFHYRDDFWFAWPDVVDVIRSPIAQDPHGRIYYTD-GRFPKVTD 127 (567) Q Consensus 52 ---a~~A~N~~~~~G~l~P~~~~~~v~~~~~~~~~Tif~~~~~~w~~w~~~V~~~~spia~D~~~Rvy~tg-d~~p~~t~ 127 (567) .+...|+...++...+.+-+. .+........|-.+...++.+.++..+++-.++..-.+....++.- ++....+. T Consensus 261 ~~~~~~~~~~~v~~~~~~~~~~~~-~~~~~~~~~gt~~~~~~~Y~~~y~~~~~v~~~~~g~~~~~~~~V~v~g~~Y~it~ 339 (976) T protein:vir:10 261 TIDVKDSSNNSVNRGVNLYFRIRT-VGQSVPFTTGSGSSATTTYQARYTTTFDLLYGGTGWQEGDYFYVWMKDGYYKITV 339 (976) T ss_pred EeeccccceEEeecCCceEEEEcc-ccceeecccccccceeeeeeEEEEeEEEEecCCCCcccCceEEEEccccceeeEE Confidence 011233444555655555433 3334455566666666677777777777655554332222333331 11122221 Q ss_pred ccccccCCcccccccccccCCCCccccee----------------EecCCCCCCCCccccceeeEEEE----EE------ Q lcl|Aclame:pro 128 ATIATKGDGNHPTSSYRLGIPAPTTAPVC----------------TVQQGGDVSDDNPNDDETRFYTE----TF------ 181 (567) Q Consensus 128 ~~iat~g~g~~p~~~y~LgVpaP~~ap~~----------------~v~~g~~~~g~~~~d~et~~Y~~----Tf------ 181 (567) ..+... .. ....+.++|...+.. .+.......+-.-.-.-++.|++ +| T Consensus 340 ~~~~~~--~~----~a~~~~~~~~~t~~d~~~~~~~~~ia~~L~~~l~a~~~~~g~tv~~~g~~~~i~~~~~~~~~s~~~ 413 (976) T protein:vir:10 340 EAISTA--NV----QANLGLIRPNPTPFDTETAVTAESIIGDIRTAIIATGNFTSANVQQIGTGLYVTRPSGTFNVTAPS 413 (976) T ss_pred EEeece--eE----EeccccccCcCCcCcccccccHHHHHHHHHHhhcccccccceEEEEcCcEEEEEecCcceEecCCC Confidence 111100 00 000111111110000 00000000000000000111111 11 Q ss_pred ----------EecCCCccCCcccceeEEEecCCCE---EEEccccCCCCCCccceEEEEEEEcCCC-------Ce-eEEE Q lcl|Aclame:pro 182 ----------VSDYGEEGPPGPASLEVTLRTPGTA---VQLTLAPVPLQNASIKRRRIYRSASGGG-------EA-DFLL 240 (567) Q Consensus 182 ----------Vt~~GeES~pS~~S~~v~v~~~g~~---V~L~~~p~~~~~~~it~~RIYRs~tggg-------~~-e~~l 240 (567) |+..++-..-++.-..|.|...+.. ..+.... ..+-...++|+-..+-+ .+ -+.+ T Consensus 414 ~~~~~~~~~~V~~~~~LP~~~~~g~~v~V~~~~~~~d~yyv~~~~----~~~~~~~~~w~E~~~~g~~~g~~~~tmP~~l 489 (976) T protein:vir:10 414 SDLLRVMSGEVANVDDLPSQCKHGYVVKVANSEADADDYYVKFFG----HNNRDGDGVWEECAKPSRNIEFDKGTMPIQL 489 (976) T ss_pred ceeEEEEEeeecchhhhhhhccCCcEEEEecCCCCceeEEEEeec----cccccccceEEEeeccccccccccccccEEE Confidence 2222221111111011111000000 0000000 00000001111110000 00 0111 Q ss_pred EEeccCceeeEEecc-------CccccCcccchhhccCCCCCCceeeeecCcEEEEEECCEEEEecCCCcccC-chh--- Q lcl|Aclame:pro 241 VAELDASVLSYTDKI-------PAKNLGPSLATWDYLPPPENMTGLCLMANGIAAGFAGNEVMFSEAYLPYAW-PEV--- 309 (567) Q Consensus 241 Vael~~st~sy~D~~-------~~~~Lg~~L~t~~~~~Pp~~~~~l~~~~NG~l~~a~Gn~l~FSEp~~Phaw-p~~--- 309 (567) +.+ +..+|.... ..++..-..|++.+.. | .++ .++++||.-+.++.||+|.+-.++-| +.. T Consensus 490 ~~~---~~g~f~~~~~~w~~r~vGd~~tnp~psf~g~~-i---s~v-~f~q~RL~f~s~~~v~~Srtgd~~nF~~~t~~~ 561 (976) T protein:vir:10 490 VRQ---ANGTFTVSQATWQNAEVGDELTNPNPSFVGKT-I---NQL-VFFRNRLVFLSDENVIMSRPGEFFNFWSKTATT 561 (976) T ss_pred Eec---ccCeEEeeeccccccccCCcccCcCceecccc-c---ceE-EEEcceEEEecCCeEEEEecCCccccccccccC Confidence 111 111222111 1111112223332211 1 123 47899999889999999999988887 431 Q ss_pred ----hceec------ccceEEEEEeCCeEEEEEcCcEEEEEcC----CcccceeEeecccCCcccccceeecCceEEEec Q lcl|Aclame:pro 310 ----NRHTT------AEDIVAICPLGTSLVVATKGEPYLFSGV----SPSTISGSKIPSMQACLSRRSMVAMEGFVLYAG 375 (567) Q Consensus 310 ----y~~~~------~~~Iv~i~pv~~gl~V~T~~~py~lsG~----~p~~m~~~~l~~~~pcvs~~siv~~~~~v~y~s 375 (567) ..+.+ ...|.-+.+++..|+++|.+.-|.|+|. +|.+.++.+ ...-.|.+.-..+..++.++|++ T Consensus 562 ~~DdD~I~~~~ss~~~~~i~~~v~~~~~L~l~T~g~e~~lsg~~~~lTP~t~~i~~-~s~~~~~~~v~Pv~vG~~v~Fv~ 640 (976) T protein:vir:10 562 FTPQDVIDLSCSSTYPAIVYDGIQVNAGLLLFTKNQQFMLTTDSDILSPETAKINA-VSSYNFNEKTHPVSLGTTVAFID 640 (976) T ss_pred CCCCccEEEEecCCcceeeEEEEecCCcEEEEecCceEEEecCCceecceeEEEEE-EEeeeccCCCccEEeCCeEEEEe Confidence 23333 2667888999999999999999999984 455544443 23335777777889999999999 Q ss_pred CCcEEEE----cCC---ceeEeecccccchhHHhhhcCc--ccEEEEEEcCeEEEEEecCCCcceeEEEc--cCCcee-E Q lcl|Aclame:pro 376 TNGLVSV----DAN---GNVALATEQIVSPEQWQSQFNP--ASIVAYPWRGEYIACYTKPDGKQDVFVFS--PVNMDI-R 443 (567) Q Consensus 376 ~dGlv~~----~~~---G~~~~vt~~~~~~~~W~~~l~P--~ti~a~~~~G~Y~~~y~~~~g~~~~~ifd--~~~~~~-~ 443 (567) +.|=.+. ..+ .+. .. .-+|.- ...+-| -.+.+..-+..-+.+.+..+++--++=|- -..+.+ - T Consensus 641 ~~g~~~r~~~~~~~~~~~~~-~~--~dlt~~--~~~l~~g~~~~~a~~~~~~~vv~~~~~~g~l~~~ty~~~~~eq~v~a 715 (976) T protein:vir:10 641 NANQFTRFFEMSNVVRQGEP-DV--VDQSKV--ISRLLDKNISLVSVSRENSVVFFSQKDTDKIYCFRYFTSGEKRLLQA 715 (976) T ss_pred cCCCeEEEEEEeeccccccc-ch--hHHHHH--hhhhcCCceEEEEEcCCCcEEEEEEcCCCEEEEEEEeecCCceeEEe Confidence 9983221 111 110 00 011110 011222 23445666666666666555543333221 122222 2 Q ss_pred EEeeeee--EEEEEecCCeEEEEeC----CEEEEEcCCCCceeEEEEeeeEEcC-------------------CCCceeE Q lcl|Aclame:pro 444 YLSTPFD--CAWVDLAKDMMRVVTG----DKMSVLAGGALPSTIRWHSKIFSLP-------------------ERTSFSC 498 (567) Q Consensus 444 ~~~~~~~--a~~~~~~~d~ly~~~g----~~i~~~~~g~~~~~~~WrSK~f~~~-------------------~~~~f~~ 498 (567) ++...++ ........|.||++-. +.+..+..-..+....+....|... ...++.. T Consensus 716 Wsr~~~~G~v~sv~~i~D~ly~vV~r~~~g~~~r~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~lD~~~~~~~~~~t~~~ 795 (976) T protein:vir:10 716 WTTWTITGNIQYHCMLDDALYVVTRNNNKDQIVKYSLKLDDAGHFVTDTQGTTSTDDDSIYRVHLDHSSSVTAASNTYNT 795 (976) T ss_pred eEEEecCCcEEEEEEeCCeEEEEEEecCCeEEEEEEEEECCccceeeeccCccccccCCcceeeeccceEEEeccccccC Confidence 2232222 3333445799999742 2222221100000001111111110 1111111 Q ss_pred EEEee-----CC-cCceEEE-EEECCeeeEe-ecCcccCCcceEcCCc-ccceEE--------EE-----EE-------- Q lcl|Aclame:pro 499 IRVKS-----PA-PERVGIT-IMADDVPVIH-FAPGTFKGSVVRLPAA-TGQNWQ--------VM-----VS-------- 548 (567) Q Consensus 499 ~~V~~-----~~-~~~~~~~-i~~d~~~~~~-~~~~~~~~~~~RLP~~-~~~~wq--------ie-----i~-------- 548 (567) -.+.. .. -....+. ..+|+..... ....+.....++||+. .+..+. +| |. T Consensus 796 ~t~~t~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~v~g~~i~l~g~~~~~~v~VGl~Y~s~~~~~~~~i~~~~g~~~~ 875 (976) T protein:vir:10 796 TTIKTTIPKPNGYESTKQLVAYDTDAGNDLGRYALVTVSGSNLEIPGNWSNNSFIIGYLYEMDVQLPTLYVTQQVGDKYR 875 (976) T ss_pred CceeEEeecCccccCceeEEEEecccCcccccceeeeecCCeeEecCCCCCCeEEEeeeeEEEEeecceeEEeCCCCccc Confidence 11100 00 0011111 1333322211 1112233345677653 222221 11 11 Q ss_pred ----ecceEEEEEeecch-hhhcC Q lcl|Aclame:pro 549 ----GFGQVERITLSTSM-SEMPV 567 (567) Q Consensus 549 ----g~~~V~~i~la~s~-~EL~~ 567 (567) |..+|+|+.+.--. ....| T Consensus 876 ~~~~gRl~i~r~~~~~~~tg~~~v 899 (976) T protein:vir:10 876 SDAKSSLIVHRIKFSFGPLGVYST 899 (976) T ss_pred ccceeeEEEEEEEEEeecccceEE Confidence 12245555543211 11222 No 43 >protein:vir:95324 Length: 823 # NCBI annotation: hypothetical protein # Family: family:all:780 # MgeID: mge:1564 # MgeName: phiV10 # Cross-refs: genbank:acc:YP_512269;genbank:gi:89152436;genbank:GeneID:3952993 Probab=60.81 E-value=0.37 Score=22.98 Aligned_cols=512 Identities=14% Similarity=0.135 Sum_probs=186.6 Q ss_pred ccceeehhhh----ccceeeccccccceeeeEEEecccccccCccchhcCcccccceEEeeee-cCCeEeEeeccccccc Q lcl|Aclame:pro 2 MPIAILANSI----INPLIFKPEAVKGISMPYIDITTMRGMMPRVVTSMLPEHSAVLAEDCHF-RFGVITPERQISGVEK 76 (567) Q Consensus 2 ~~~~~~~~~~----~~~~~~~~~~~~~~~M~~I~i~~f~G~~pr~~p~lL~~~~a~~A~N~~~-~~G~l~P~~~~~~v~~ 76 (567) |||.++-+|+ |.|++.- |.+- .-=.+++..+.|+-. ..|.|+-+.+-.-++. T Consensus 1 m~i~~~q~sF~~GElsP~l~g----------------------R~Dl-~ry~~q~~~~~N~~~~~~GGl~rRpGt~fva~ 57 (823) T protein:vir:95 1 MAISWIQPSFAGGEIGPSLYG----------------------RIDM-AKYQVALRKCDNFIVRQYGGVENRPGTRFVGA 57 (823) T ss_pred CcceeechhccCceechheec----------------------cchH-HHHHHHHhhhhCcEeeecCCceecCchhhhhh Confidence 5555544432 2222221 1111 111578888888877 6788877777666654 Q ss_pred cc-cccceEEEEE--CC-ceE-Ee--------eCCeEEEe---------eCCCCCCCc---------ceEEEcCCCeeee Q lcl|Aclame:pro 77 TF-TIKPKTIFHY--RD-DFW-FA--------WPDVVDVI---------RSPIAQDPH---------GRIYYTDGRFPKV 125 (567) Q Consensus 77 ~~-~~~~~Tif~~--~~-~~w-~~--------w~~~V~~~---------~spia~D~~---------~Rvy~tgd~~p~~ 125 (567) .. +....-|+.| .. +.| |. |.+.--++ .+|=..+.. ..+|++.-.+|+. T Consensus 58 ~~~~~g~~rLipf~~s~~q~y~Lefg~~~irV~~~~g~vv~~~~~~~ev~tPy~~~~l~~Lr~~qsaD~~fivh~~~~p~ 137 (823) T protein:vir:95 58 AKYPNRKCRLIPFQFSTVQTYALEFGHQYMRVIKDGALVLNSSNVIYEIATPYTEADLFRIKFTQSADVLTLVHPAYPPK 137 (823) T ss_pred hcCCCCCeeEEEEEeCCCcEEEEEEcCCeEEEEeCCcEEEecCCceeEEecccccccccceeEEEeccEEEEEcCCccce Confidence 32 1233334433 22 222 22 33221222 223111000 1566665544443 Q ss_pred eecc----------ccccCCccccccc--ccccCCCCcccceeEecCC--CCCCCCccccceeeEEEEEEEecCCCccCC Q lcl|Aclame:pro 126 TDAT----------IATKGDGNHPTSS--YRLGIPAPTTAPVCTVQQG--GDVSDDNPNDDETRFYTETFVSDYGEEGPP 191 (567) Q Consensus 126 t~~~----------iat~g~g~~p~~~--y~LgVpaP~~ap~~~v~~g--~~~~g~~~~d~et~~Y~~TfVt~~GeES~p 191 (567) +-.. +...++ .+-..- ..+.+.+-......++... ...++..-..-....|..+.+..++.+... T Consensus 138 ~L~r~~~~~w~l~~~~~~~g-p~~~~~~~~t~~v~~~~~~~~~t~ta~~~~~~~d~vg~~~~l~~~~~~~~~~~~~~~~~ 216 (823) T protein:vir:95 138 ELRRYAHDNWQLVDVVTKNG-PFEDINIDESLTVYASASTGTITLTASASIFGAEQVGKLFYLEQPAVDSVPVWETSKST 216 (823) T ss_pred EEEecCCCCceEEEEEEecc-ccccccccceeEEeccccCceeEEeecccccchhhccceEEEeccccceeeecceeeee Confidence 2211 111000 000000 0011111101111111111 000000000000011112233333322211 Q ss_pred cccceeEEEec-------CCCEEEEccccCCCCCC-----------c-cceEEEEEEEcCCCCeeEEEEEec--cCceee Q lcl|Aclame:pro 192 GPASLEVTLRT-------PGTAVQLTLAPVPLQNA-----------S-IKRRRIYRSASGGGEADFLLVAEL--DASVLS 250 (567) Q Consensus 192 S~~S~~v~v~~-------~g~~V~L~~~p~~~~~~-----------~-it~~RIYRs~tggg~~e~~lVael--~~st~s 250 (567) +. ........ .+...++. |....+. + ....+.|+. +.+......+... +....+ T Consensus 217 ~~-~~~~~~~~~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~g~~~~t~v~~~~~~~~~~~ 291 (823) T protein:vir:95 217 SI-GDIRRADSNYYRAVTAGKTGTLR--PSHTEGTSWDGWGGSGDDDTGIEWEYLHS--GFGIARITAVNGTTATAEVIS 291 (823) T ss_pred cc-cceEEecccceeeeeccccceee--cccCCcceEEeceecccccceeEEEEEeC--CcceEEEEeecceeeeceEee Confidence 11 11111100 01111111 1100000 0 011222221 1121111112111 111223 Q ss_pred EEeccCccccCcccchhhccCCCCC----CceeeeecCcEEEEEEC----CEEEEecCCCcccCc-hh-----h--ceec Q lcl|Aclame:pro 251 YTDKIPAKNLGPSLATWDYLPPPEN----MTGLCLMANGIAAGFAG----NEVMFSEAYLPYAWP-EV-----N--RHTT 314 (567) Q Consensus 251 y~D~~~~~~Lg~~L~t~~~~~Pp~~----~~~l~~~~NG~l~~a~G----n~l~FSEp~~Phawp-~~-----y--~~~~ 314 (567) +.+.... ...-.+..|...+-+ .-..+.++++||.-..+ +.||+|.+-.++-|- .. . .+++ T Consensus 292 ~~~~~~~---~~~~~t~~~~~~~~~~~~g~Ps~v~f~q~RL~f~g~~~~p~~v~~Srtgd~~nF~~~~~~~DdD~I~~~~ 368 (823) T protein:vir:95 292 YIPSQVV---GEDNASYKWAKYAWNSVNGYPGTVVYYQQRLYFAASTAFPQTIWASRTGDYKDFGKSNPTQDDDRIIYTY 368 (823) T ss_pred eeccccc---cCCcCCccccccccCcCCCCccEEEEEeceEEEEEcCCCCcEEEEeccCCccccccccCCCCCCcEEEEE Confidence 3222111 111233334333211 11234588999885533 799999988887762 21 1 1222 Q ss_pred c----cceEEEEEeCCeEEEEEcCcEEEEEcC-----CcccceeEeecccCCcccccceeecCceEEEecCCcEEE---- Q lcl|Aclame:pro 315 A----EDIVAICPLGTSLVVATKGEPYLFSGV-----SPSTISGSKIPSMQACLSRRSMVAMEGFVLYAGTNGLVS---- 381 (567) Q Consensus 315 ~----~~Iv~i~pv~~gl~V~T~~~py~lsG~-----~p~~m~~~~l~~~~pcvs~~siv~~~~~v~y~s~dGlv~---- 381 (567) . ..|.-+.+++ .|+|+|++.-|.|+|. +|.+..+.+. ....| +.-..+..++.++|++++|=.+ T Consensus 369 s~~~~~~i~~~v~~~-~Lli~t~~~e~~l~~~~~~~lTP~~~~~~~~-s~~g~-~~~~Pv~vg~~~~Fv~~~g~~vre~~ 445 (823) T protein:vir:95 369 AGRQVNEIRHLIDVG-SLVALTSGGEYVITGDQNKVLTPSSFAFSSQ-GSNGS-SNVPPIAVANIALFVQEKGSVVRDLA 445 (823) T ss_pred cCCcceEEEEEeecC-cEEEEecCcEEEEEcCCCcccceeeEEEEEe-ecccc-ccccceEeCCeEEEEecCCCEEEEEE Confidence 2 4577888985 7999999999999874 6677665544 55577 3456678899999999998222 Q ss_pred -EcCCce--eEeec---ccccch---hHHhhhcCcccEEEEEEcCeEEEEEecCCCcceeEEEccCCceeEEEeeeee-- Q lcl|Aclame:pro 382 -VDANGN--VALAT---EQIVSP---EQWQSQFNPASIVAYPWRGEYIACYTKPDGKQDVFVFSPVNMDIRYLSTPFD-- 450 (567) Q Consensus 382 -~~~~G~--~~~vt---~~~~~~---~~W~~~l~P~ti~a~~~~G~Y~~~y~~~~g~~~~~ifd~~~~~~~~~~~~~~-- 450 (567) -...++ +.-+| +.+|.. .+|...-+|. -+.+....+|+--++-|+...+..-++...++ T Consensus 446 ~~~~~d~~~~~dlT~~a~hl~~~~~i~~~a~~~~p~----------~~~~~v~~dG~l~~~ty~~~q~v~aW~~~~~~g~ 515 (823) T protein:vir:95 446 YSFDVDGYQGNDLTILANHLFQKHSIVDWCFSIVPY----------SSAFCIRDDGKLLVMTYLRDQQVFAWAPQSSTGK 515 (823) T ss_pred EeeecCceecchhhhhhhhhcCCCceEEEEEecCCC----------eEEEEEecCCcEEEEEEecccceeeeEEEecCCc Confidence 111110 11122 333321 1222111233 33333334454445555554332334333333 Q ss_pred ----EEEEEecCCeEEEEeC-----CE---EEEEcCCCCceeEEEEeeeEEcCCCCce-------eEEEEeeC--CcCc- Q lcl|Aclame:pro 451 ----CAWVDLAKDMMRVVTG-----DK---MSVLAGGALPSTIRWHSKIFSLPERTSF-------SCIRVKSP--APER- 508 (567) Q Consensus 451 ----a~~~~~~~d~ly~~~g-----~~---i~~~~~g~~~~~~~WrSK~f~~~~~~~f-------~~~~V~~~--~~~~- 508 (567) |...+...|.||++-. .. |..++...... ....|.+...+++ ...-+.+. ...+ T Consensus 516 ~~~~~~i~~~~~d~l~~~v~R~i~g~~~~yiE~~~~~~~~~----~~~~~~lD~~~s~~g~~~~~~~~~l~~g~~~l~~l 591 (823) T protein:vir:95 516 YESTCSISEGNEDAVYFVVNRTVNGQTVRYIERLSSRLFTS----DEDAFFVDSGLSYDGRNTSDRTMTITGGSGEWDYL 591 (823) T ss_pred EEEEEEecCCCCCEEEEEEEeccCCeEEEEEEeeccccCCC----ccceeEEEEEEEeecCcccceeeEecCCCCccccc Confidence 3333445789999742 22 11222211100 0112222111111 11111111 0111 Q ss_pred --eEEEEEECCeeeEeecCcccCCcceEcCCccc---------ceEEEEEEe--cceEEEEEeecchhh----------- Q lcl|Aclame:pro 509 --VGITIMADDVPVIHFAPGTFKGSVVRLPAATG---------QNWQVMVSG--FGQVERITLSTSMSE----------- 564 (567) Q Consensus 509 --~~~~i~~d~~~~~~~~~~~~~~~~~RLP~~~~---------~~wqiei~g--~~~V~~i~la~s~~E----------- 564 (567) ..+. .+||... .... ....+.||--.. .+-+..+.. ...+.+++......+ T Consensus 592 ~g~~v~-~adg~~~---~~~~-v~g~i~l~~~~~~~~vGl~~~~~i~~~~~~v~~~~a~~~~~~r~v~a~l~~~~t~~~~ 666 (823) T protein:vir:95 592 AEYTIS-VSGGAYF---TSSD-VGAQLQFPYTGADPDTGYEVSKELRCDIISVTSNTAVVVRANRNVPPSLRNVATTNWQ 666 (823) T ss_pred CceEEE-ecCcceE---CCcc-ceeEEEeCcCCCccccccceEEEEEEeeceeeCCceEEEccCCcccceeeeeeccccc Confidence 1122 2444332 1111 123445543210 111111111 112222222211110 Q ss_pred hcC Q lcl|Aclame:pro 565 MPV 567 (567) Q Consensus 565 L~~ 567 (567) +++ T Consensus 667 ~~~ 669 (823) T protein:vir:95 667 MAR 669 (823) T ss_pred ccc Confidence 001 No 44 >protein:vir:78957 Length: 826 # NCBI annotation: putative tail tubular protein B # Family: family:all:825 # MgeID: mge:1860 # MgeName: LKD16 # Cross-refs: genbank:acc:YP_001522826;genbank:gi:158345061;genbank:GeneID:5687447 Probab=56.38 E-value=0.46 Score=22.44 Aligned_cols=495 Identities=12% Similarity=0.049 Sum_probs=165.3 Q ss_pred CccceeehhhhccceeeccccccceeeeEEEeccccccc-----CccchhcCcccccceEEeeeecCCeEeEeecccccc Q lcl|Aclame:pro 1 MMPIAILANSIINPLIFKPEAVKGISMPYIDITTMRGMM-----PRVVTSMLPEHSAVLAEDCHFRFGVITPERQISGVE 75 (567) Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~M~~I~i~~f~G~~-----pr~~p~lL~~~~a~~A~N~~~~~G~l~P~~~~~~v~ 75 (567) -..|.--.|+- ..-+.+. +....|....=...-++. ++..-+.|-+. ...+.+-.+. ............. T Consensus 164 ~v~i~~~~~~~--~~~~s~t-~~y~t~~~~~~~~~~~~~~~~~~~~~~a~~l~~~-~~~~~~~~~~-~~t~~~~~~~~~~ 238 (826) T protein:vir:78 164 SLTIKVKDNAT--GTTYSHT-ATYVTPDNASTNPNLAEAPFQTSVGYIAWQLFGK-FFGAPEYTLP-NSTKKYPKVDPDP 238 (826) T ss_pred EEEeccceeec--cccccee-EEEEeccCCccccccccccceecchhhheeccee-eccccceeee-ccceeEeeccccc Confidence 11111111110 0000000 000000000000000000 00000000000 0000000000 0001110000000 Q ss_pred ccccccceEEEEEC-CceEEee-CCeEEEeeCCCCCCCcceEEEcCCCeeeeeeccccccCCcccccccccccCCCCccc Q lcl|Aclame:pro 76 KTFTIKPKTIFHYR-DDFWFAW-PDVVDVIRSPIAQDPHGRIYYTDGRFPKVTDATIATKGDGNHPTSSYRLGIPAPTTA 153 (567) Q Consensus 76 ~~~~~~~~Tif~~~-~~~w~~w-~~~V~~~~spia~D~~~Rvy~tgd~~p~~t~~~iat~g~g~~p~~~y~LgVpaP~~a 153 (567) ......-.+.++.. +.+|..- +..+....+.-.++.+.+.+-... +...++ .|. -.|+.+ T Consensus 239 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~---------v~~~~~--l~a-------~~p~~~ 300 (826) T protein:vir:78 239 AAATVAGYLNQRGVQDGYIAFRGDGDIVVEVSTDMGNNYGIASGGMS---------LNATAD--LPA-------LLPGAG 300 (826) T ss_pred cceeeccceeecccccceEEEecCCCeEEEeccCCCccceEEEeeEE---------Eecccc--eee-------eecccc Confidence 00000000111110 0111111 123333334444444444332210 000000 000 012211 Q ss_pred cee---EecCCCCCCCCccccceeeEEEEEEEecCC--CccCCcccceeEEEecCCCEEEEccccCCCCCCccceEEEEE Q lcl|Aclame:pro 154 PVC---TVQQGGDVSDDNPNDDETRFYTETFVSDYG--EEGPPGPASLEVTLRTPGTAVQLTLAPVPLQNASIKRRRIYR 228 (567) Q Consensus 154 p~~---~v~~g~~~~g~~~~d~et~~Y~~TfVt~~G--eES~pS~~S~~v~v~~~g~~V~L~~~p~~~~~~~it~~RIYR 228 (567) ... ....+....... ....|-++|+...| +|.+ .+|..+.+. ++.++-++| T Consensus 301 ~~~~~~~~~~~~~~~~g~----~~~~~y~~~~~~~~~w~e~a-----------~~g~~~~~~---------tmp~~l~~~ 356 (826) T protein:vir:78 301 TPGTGVQFMDGAIMATGS----TKAPVYFAWDAANRRWAERA-----------AYGTDWVLK---------KMPLALRWD 356 (826) T ss_pred cceEEEEEEeeeEecCCC----cccceeEEEEcCCceEEEee-----------ccCcccccc---------cccEEEEEe Confidence 100 000000000000 01124456665543 1211 123211111 222333343 Q ss_pred EEcCCCCeeEEEEEeccCceeeEEeccCccccCcccchhhccCCCCCCceeeeecCcEEEEEECCEEEEecCCCcccC-c Q lcl|Aclame:pro 229 SASGGGEADFLLVAELDASVLSYTDKIPAKNLGPSLATWDYLPPPENMTGLCLMANGIAAGFAGNEVMFSEAYLPYAW-P 307 (567) Q Consensus 229 s~tggg~~e~~lVael~~st~sy~D~~~~~~Lg~~L~t~~~~~Pp~~~~~l~~~~NG~l~~a~Gn~l~FSEp~~Phaw-p 307 (567) ...+ .|. +.. ..|.+....++.....+++.-.. | +.+ .++++||.-+.++.||+|.+-.++-| | T Consensus 357 ~~~~----~f~-~~~-----~~w~~r~~gd~~tnp~psf~g~~-i---~~v-~f~q~RL~f~~~~~v~~Srtgd~~nF~~ 421 (826) T protein:vir:78 357 ESTD----TYS-LNE-----LEYDRRGSGDEETNPTFNFVKRG-I---TGM-TTFQGRLVLLSQEYVCMSASNNPHRWFK 421 (826) T ss_pred cCCC----eEE-Eee-----ccccccccCcccccCcccccCCC-c---eEE-EEEeceEEEeeCCeEEEEeccCcccccc Confidence 2111 121 111 12333332222222223322111 1 123 58899998788999999999999887 3 Q ss_pred hh-------hceec------ccceEEEEEeCCeEEEEEcCcEEEEEcC---CcccceeEeecccCCcccccceeecCceE Q lcl|Aclame:pro 308 EV-------NRHTT------AEDIVAICPLGTSLVVATKGEPYLFSGV---SPSTISGSKIPSMQACLSRRSMVAMEGFV 371 (567) Q Consensus 308 ~~-------y~~~~------~~~Iv~i~pv~~gl~V~T~~~py~lsG~---~p~~m~~~~l~~~~pcvs~~siv~~~~~v 371 (567) .. .-+.+ ...|.-+.+++..|+++|.+.-|.|+|. +|.+..+.+ ...-.|.+.-..+..++.+ T Consensus 422 ~t~~~~~DdD~I~~~~~s~~~~~i~~~v~~~~~L~l~T~~~e~~l~~~~~lTP~~~~~~~-~s~~~~~~~~~Pv~vG~~v 500 (826) T protein:vir:78 422 KSAAALNDDDPIEIAAQGSLTEPYEHAVTFNKDLIVFAKKYQAVVPGGGIVTPRTAVISI-TTQYDVDTRAAPAVTGRSV 500 (826) T ss_pred ccccCCCCCCcEEEEEccCcceeEEEEEecCCcEEEEecCcEEEEeCCCcccceeEEEEE-EEeecccCCCCceEeCCeE Confidence 32 12222 2556778899999999999999999995 555554433 3334577677778999999 Q ss_pred EEecCCc-----E---E-EEcCCce--eEeecccccchhHHhhhcCcccEE--EEEEcCeEEEEEecCCCcceeEEEc-- Q lcl|Aclame:pro 372 LYAGTNG-----L---V-SVDANGN--VALATEQIVSPEQWQSQFNPASIV--AYPWRGEYIACYTKPDGKQDVFVFS-- 436 (567) Q Consensus 372 ~y~s~dG-----l---v-~~~~~G~--~~~vt~~~~~~~~W~~~l~P~ti~--a~~~~G~Y~~~y~~~~g~~~~~ifd-- 436 (567) +|++++| + . ....++. ++-+|.- ...+-|..+. |++-+-.++.+.+..+|+--++-|. T Consensus 501 ~F~~~r~~~~s~v~e~~~~~~~~~~y~~~dlt~~-------~~~l~~~~v~~~a~s~~~~~~v~~~~~~g~l~~~ty~~~ 573 (826) T protein:vir:78 501 YFAAERALGFMGLHEMAPSPSTDSHYVAEDVTSH-------IPSYMPGPAEYIQAAASSGYLVFGTSAADEMICHQYLWQ 573 (826) T ss_pred EEEecCCCceeEEEEEEeeecccCccchHHHHHH-------HHHhcCCCeEEEEEeCCCCeEEEEEcCCCeEEEEEEEec Confidence 9999886 1 1 1112221 1111111 0122334433 3343555666666555554444442 Q ss_pred cCCcee-EEEeeeee--EEEEEecCCeEEEEeCC----EEEEEc----CCCCc----eeEEEEeeeEEcCCCC---ceeE Q lcl|Aclame:pro 437 PVNMDI-RYLSTPFD--CAWVDLAKDMMRVVTGD----KMSVLA----GGALP----STIRWHSKIFSLPERT---SFSC 498 (567) Q Consensus 437 ~~~~~~-~~~~~~~~--a~~~~~~~d~ly~~~g~----~i~~~~----~g~~~----~~~~WrSK~f~~~~~~---~f~~ 498 (567) -..+.+ -++...++ ........|.||++-.+ .+.+++ +.... ..-.|+.-.+...... .+.+ T Consensus 574 ~~e~~v~aW~~~~~~g~v~~v~~i~d~l~~vv~r~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 653 (826) T protein:vir:78 574 GNEKVQNAYHRWTLRHQIIGAYFTGDNLMVLIQKGQEIALGRMHLNSLPAREGLQYPKYDYWRRIEATVDGELELTKQHW 653 (826) T ss_pred CCcEEEEeEEEEccCCcEEEEEEECCeEEEEEEeCCCEEEEEEEEEecCCCccccccccceeEEEEEEEcceecccccee Confidence 121211 22222222 22333448999997422 233331 11110 0111111111110000 0000 Q ss_pred EEEeeCC-cCce--EEEEEECCeeeEeecCcccCCcceEcCCcc-cc------e--EEEE--------------EEecce Q lcl|Aclame:pro 499 IRVKSPA-PERV--GITIMADDVPVIHFAPGTFKGSVVRLPAAT-GQ------N--WQVM--------------VSGFGQ 552 (567) Q Consensus 499 ~~V~~~~-~~~~--~~~i~~d~~~~~~~~~~~~~~~~~RLP~~~-~~------~--wqie--------------i~g~~~ 552 (567) --+.... ...+ .+.-+.++..+ .........--+++|... +. . -+|| ..|..+ T Consensus 654 ~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~~~~v~VGl~y~s~~~~~~~~~~~~~g~~~~~~r~~ 732 (826) T protein:vir:78 654 DLIKDGAAVYQLQPQVGAYMERYQL-GVKRETSTKVFLDVPEAVVGSVYVVGCEFWSKVEFTPPVLRDHNGLPMTSTRAV 732 (826) T ss_pred EEecCCceeeeeccceeeeccccce-eccccCCCceEEEeCCCccccEEEEeeceeEEEEeCceEEecCCCcceeecceE Confidence 0000000 0000 00011111111 001111111123444321 11 1 1111 334456 Q ss_pred EEEEEe--ecchhhhcC Q lcl|Aclame:pro 553 VERITL--STSMSEMPV 567 (567) Q Consensus 553 V~~i~l--a~s~~EL~~ 567 (567) ++|+.+ ..| .++.| T Consensus 733 l~r~~~~~~~t-g~~~v 748 (826) T protein:vir:78 733 LHRYNVNFGWT-GEFLW 748 (826) T ss_pred EEEEEEEeecc-ccEEE Confidence 666543 222 33333 No 45 >protein:vir:2203 Length: 794 # NCBI annotation: tail tubular protein B # Family: family:all:825 # MgeID: mge:49 # MgeName: T7 # Cross-refs: genbank:acc:NP_042000;swissprot:sw:p03747;genbank:gi:9627472;uniprot:P03747;genbank:GeneID:1261024 Probab=48.93 E-value=0.65 Score=21.59 Aligned_cols=519 Identities=11% Similarity=0.100 Sum_probs=186.5 Q ss_pred eeEE--EecccccccCccchhcCcccccceEEeeee-cCCeEeEeecccccccccc----ccceEEEEE-CC---ceEEe Q lcl|Aclame:pro 27 MPYI--DITTMRGMMPRVVTSMLPEHSAVLAEDCHF-RFGVITPERQISGVEKTFT----IKPKTIFHY-RD---DFWFA 95 (567) Q Consensus 27 M~~I--~i~~f~G~~pr~~p~lL~~~~a~~A~N~~~-~~G~l~P~~~~~~v~~~~~----~~~~Tif~~-~~---~~w~~ 95 (567) |+.| .|+.|.|=+=.=.+-+-=.+|+..+.|.-. -.|.|+-+-+-.-++.... ....-|+.+ .+ .+-+. T Consensus 1 M~~i~~s~~n~~~GvSqq~D~~ry~~q~~~~~N~~~~~~gG~~rRpG~~fv~~l~~~~~~~~~~~l~~~~~~~~~~y~l~ 80 (794) T protein:vir:22 1 MALISQSIKNLKGGISQQPDILRYPDQGSRQVNGWSSETEGLQKRPPLVFLNTLGDNGALGQAPYIHLINRDEHEQYYAV 80 (794) T ss_pred CceeeeecchhhcccccCCchHHhhhHHhhhhcceeeccCCceeCCchHhhhhhcccCCCCCccEEEEEEeCCCcEEEEE Confidence 7765 456666543322233333688999999988 6788877766655543211 111122222 11 12222 Q ss_pred --------e--CCeEEEeeCCCCC------CCc---------ceEEEcCCCeeeeeecccc-------------ccCCcc Q lcl|Aclame:pro 96 --------W--PDVVDVIRSPIAQ------DPH---------GRIYYTDGRFPKVTDATIA-------------TKGDGN 137 (567) Q Consensus 96 --------w--~~~V~~~~spia~------D~~---------~Rvy~tgd~~p~~t~~~ia-------------t~g~g~ 137 (567) | .+.+-.+..|.+. ++. ..+|++.-.+|.......+ ...+|. T Consensus 81 ~~~~~irv~~~~G~~~~v~~~~~~~y~~~~~~~~~l~~~q~aD~~fi~~~~~~p~~~~~~~~~~~~~~~~~g~v~v~~g~ 160 (794) T protein:vir:22 81 FTGSGIRVFDLSGNEKQVRYPNGSNYIKTANPRNDLRMVTVADYTFIVNRNVVAQKNTKSVNLPNYNPNQDGLINVRGGQ 160 (794) T ss_pred EcCCeEEEEecCCcEEEeecCCCccceecCCCcccEEEEEEcCEEEEEcCCeeeeEeeccccCCCCCCCceEEEEccCCc Confidence 2 2222223323211 110 1344444333321111100 001111 Q ss_pred cccccccccCCCCcccceeEecCCCCCCCCcccc---------------------ce--eeEEEEEEEec------CCCc Q lcl|Aclame:pro 138 HPTSSYRLGIPAPTTAPVCTVQQGGDVSDDNPND---------------------DE--TRFYTETFVSD------YGEE 188 (567) Q Consensus 138 ~p~~~y~LgVpaP~~ap~~~v~~g~~~~g~~~~d---------------------~e--t~~Y~~TfVt~------~GeE 188 (567) + ...|.+.|..... .+..+..++........+ .. ...|+. ..+. ..+. T Consensus 161 y-~~ty~v~I~~~~~-a~~~~p~gt~~~~~~~~~~~~ia~~L~~~l~~~~~~~t~~~~~~~~~i~-a~~~~~~~~~t~~~ 237 (794) T protein:vir:22 161 Y-GRELIVHINGKDV-AKYKIPDGSQPEHVNNTDAQWLAEELAKQMRTNLSDWTVNVGQGFIHVT-APSGQQIDSFTTKD 237 (794) T ss_pred c-ceeEEEEeccCcc-eEEEEcCCCccccceeechhhhhhhhhhhheeccccceEEeCCceEEEE-EcCCceEEEEeeec Confidence 1 1123333322111 111111111110000000 00 011111 1111 0111 Q ss_pred cCCcccceeEEEecCCCEEEEccccCCCCCCccceEEEEEEEcCC-CCeeEEEEEec----------cCceeeEEeccCc Q lcl|Aclame:pro 189 GPPGPASLEVTLRTPGTAVQLTLAPVPLQNASIKRRRIYRSASGG-GEADFLLVAEL----------DASVLSYTDKIPA 257 (567) Q Consensus 189 S~pS~~S~~v~v~~~g~~V~L~~~p~~~~~~~it~~RIYRs~tgg-g~~e~~lVael----------~~st~sy~D~~~~ 257 (567) +........+. ...++.-+| ++..++| ..++|= .+++ ...+|+.-.+- +.....+...... T Consensus 238 g~~~t~~~~~~-~~~~~~~~l--p~~~~~G---~~v~i~--~~~~~~~~~Y~v~~~~~~~~w~e~~~~~~~~~~~~~t~p 309 (794) T protein:vir:22 238 GYADQLINPVT-HYAQSFSKL--PPNAPNG---YMVKIV--GDASKSADQYYVRYDAERKVWTETLGWNTEDQVLWETMP 309 (794) T ss_pred ccCcceeEEEE-eccccceec--cccCCCC---eEEEEE--eCCCCCcceeEEEEeccceEEEEeeeccceeeeccccee Confidence 11111111110 000110111 1111111 111111 1111 11122211100 0000000000000 Q ss_pred cccCc------ccchhhccC---------CCCC--Cce--eeeecCcEEEEEECCEEEEecCCCcccC-chhh------- Q lcl|Aclame:pro 258 KNLGP------SLATWDYLP---------PPEN--MTG--LCLMANGIAAGFAGNEVMFSEAYLPYAW-PEVN------- 310 (567) Q Consensus 258 ~~Lg~------~L~t~~~~~---------Pp~~--~~~--l~~~~NG~l~~a~Gn~l~FSEp~~Phaw-p~~y------- 310 (567) ..|-+ .+...+|.. |.++ .+. -+.++++||.-+.++.||+|..-.++-| |..- T Consensus 310 ~~lv~~~~~~~~~~~~~w~~r~~Gd~~tnp~psf~g~~i~~v~f~q~RL~f~~~~~v~~Srtgd~~nF~~~t~~~~~DdD 389 (794) T protein:vir:22 310 HALVRAADGNFDFKWLEWSPKSCGDVDTNPWPSFVGSSINDVFFFRNRLGFLSGENIILSRTAKYFNFYPASIANLSDDD 389 (794) T ss_pred eEeeeccCCcEEEeeccccccccCccccCCcceecCCCcceEEEEcceEEEecCCeEEEEccCCccccccccCcCCCCCc Confidence 00100 001111221 1111 111 2358899999999999999999988887 4321 Q ss_pred ceec------ccceEEEEEeCCeEEEEEcCcEEEEEcC---CcccceeEeecccCCcccccceeecCceEEEecCCcE-- Q lcl|Aclame:pro 311 RHTT------AEDIVAICPLGTSLVVATKGEPYLFSGV---SPSTISGSKIPSMQACLSRRSMVAMEGFVLYAGTNGL-- 379 (567) Q Consensus 311 ~~~~------~~~Iv~i~pv~~gl~V~T~~~py~lsG~---~p~~m~~~~l~~~~pcvs~~siv~~~~~v~y~s~dGl-- 379 (567) -+.+ ...|.-+.++..+|+++|.+.-|.|+|. +|.+..+.+ ...-.|.+.-..+..++.++|+++.|= T Consensus 390 ~i~~~~ss~~~~~i~~~v~~~~~L~i~t~~~e~~l~~~~~lTP~~~~~~~-~s~~~~~~~~~Pv~vg~~v~f~~~~g~~~ 468 (794) T protein:vir:22 390 PIDVAVSTNRIAILKYAVPFSEELLIWSDEAQFVLTASGTLTSKSVELNL-TTQFDVQDRARPFGIGRNVYFASPRSSFT 468 (794) T ss_pred cEEEEecCCcceeeEEEeecCCcEEEEecCcEEEEeCCCcccceeEEEEE-EEEeeccCCCCceEeCCeEEEEecCCCee Confidence 1111 1335667888899999999999999986 455544332 233457767778889999999999982 Q ss_pred ------EEEc-CCc-eeEeecccccchhHHhhhcCcccE---EEEEEcCeEEEEEecCCCcceeEEE-c-cCCcee-EEE Q lcl|Aclame:pro 380 ------VSVD-ANG-NVALATEQIVSPEQWQSQFNPASI---VAYPWRGEYIACYTKPDGKQDVFVF-S-PVNMDI-RYL 445 (567) Q Consensus 380 ------v~~~-~~G-~~~~vt~~~~~~~~W~~~l~P~ti---~a~~~~G~Y~~~y~~~~g~~~~~if-d-~~~~~~-~~~ 445 (567) .... .++ ++.-+|. .- ..+=|... .+..-+..=+.+.+..+++--++=| + -..+.+ -++ T Consensus 469 ~~~r~~~~~~~~d~y~~~Dlt~--~~-----~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~y~~~~~e~~v~aW~ 541 (794) T protein:vir:22 469 SIHRYYAVQDVSSVKNAEDITS--HV-----PNYIPNGVFSICGSGTENFCSVLSHGDPSKIFMYKFLYLNEELRQQSWS 541 (794) T ss_pred EEEEeEeeecccCceehhhHHH--HH-----HHhcCCceEEEEEeCCCCcEEEEEEcCCCEEEEEEEeecCCceeEEeeE Confidence 1111 111 0111110 00 01112211 1111222222222222221111111 1 111221 222 Q ss_pred eeeee----EEEEEecCCeEEEEeCC----EEEEE----cC----CCCce-eEEEEeeeEEcCCCC-----ceeEEE--- Q lcl|Aclame:pro 446 STPFD----CAWVDLAKDMMRVVTGD----KMSVL----AG----GALPS-TIRWHSKIFSLPERT-----SFSCIR--- 500 (567) Q Consensus 446 ~~~~~----a~~~~~~~d~ly~~~g~----~i~~~----~~----g~~~~-~~~WrSK~f~~~~~~-----~f~~~~--- 500 (567) ...++ .+-.....|.||++..+ .+..+ +. ++... -+.++.+ |..+..+ +.+-+. T Consensus 542 ~~~~~g~~~~~~~~~~~d~l~~iv~r~~~~~~~r~~~~~~~~~~~~~~~~~~lD~~~~-~~~~~g~~~~~~~~t~~~~~~ 620 (794) T protein:vir:22 542 HWDFGENVQVLACQSISSDMYVILRNEFNTFLARISFTKNAIDLQGEPYRAFMDMKIR-YTIPSGTYNDDTFTTSIHIPT 620 (794) T ss_pred EEEcCCCEEEEEEEecCCEEEEEEEeCCCEEEEEEEEeeccccCCCccceeeeeeeEE-EeeccceeecCCcceEEEccc Confidence 22222 11223457999997532 23332 22 11111 1223322 2222211 111111 Q ss_pred EeeC-CcCceEEEEEECCeeeEeecC--cccCCcceEcCCcc-cc------eEE--EE-----E-------------Eec Q lcl|Aclame:pro 501 VKSP-APERVGITIMADDVPVIHFAP--GTFKGSVVRLPAAT-GQ------NWQ--VM-----V-------------SGF 550 (567) Q Consensus 501 V~~~-~~~~~~~~i~~d~~~~~~~~~--~~~~~~~~RLP~~~-~~------~wq--ie-----i-------------~g~ 550 (567) +.+. ..+.-.+.+..||........ +.....-+++|..+ +. ... || + .|. T Consensus 621 ~~g~~~~~g~~v~~~~dg~~~~~~~~~~~~~~~~~~~v~~~~~~~~v~VGl~y~s~~~~~~~~~~~~~~~~~~~~~~~gr 700 (794) T protein:vir:22 621 IYGANFGRGKITVLEPDGKITVFEQPTAGWNSDPWLRLSGNLEGRMVYIGFNINFVYEFSKFLIKQTADDGSTSTEDIGR 700 (794) T ss_pred ccCcccccceEEEEEcCCceeeceeeeeeeeccceEEeCCCCCCcEEEEeeeeeEEEEecceEEEecCCCccceeeecce Confidence 1111 122345566777754322111 11111234555431 11 111 11 1 123 Q ss_pred ceEEEEEeecchhh---hcC Q lcl|Aclame:pro 551 GQVERITLSTSMSE---MPV 567 (567) Q Consensus 551 ~~V~~i~la~s~~E---L~~ 567 (567) .+++|+.+. +.+ +.| T Consensus 701 l~l~r~~~~--~~~tg~~~v 718 (794) T protein:vir:22 701 LQLRRAWVN--YENSGTFDI 718 (794) T ss_pred EEEEEEEEE--eccccceEE Confidence 345554432 222 222 No 46 >protein:vir:10452 Length: 794 # NCBI annotation: tail protein # Family: family:all:825 # MgeID: mge:184 # MgeName: phiA1122 # Cross-refs: genbank:acc:NP_848299;genbank:gi:30387490;genbank:GeneID:1733952 Probab=47.04 E-value=0.71 Score=21.38 Aligned_cols=527 Identities=10% Similarity=0.090 Sum_probs=190.2 Q ss_pred eeEE--EecccccccCccchhcCcccccceEEeeee-cCCeEeEeecccccccccc---ccceEEEEE-----CCc---- Q lcl|Aclame:pro 27 MPYI--DITTMRGMMPRVVTSMLPEHSAVLAEDCHF-RFGVITPERQISGVEKTFT---IKPKTIFHY-----RDD---- 91 (567) Q Consensus 27 M~~I--~i~~f~G~~pr~~p~lL~~~~a~~A~N~~~-~~G~l~P~~~~~~v~~~~~---~~~~Tif~~-----~~~---- 91 (567) |+.| .|+.|.|=+=.=.+-+-=.+|+..+.|.-. -.|.|+-+.+-.-++.... .....+|+| ... T Consensus 1 M~~i~~s~~n~~~GvSqq~D~~Ry~~q~~~~~N~~~~~~gG~~rRpGt~fv~~l~~~~~~~~~~~~~~~~rd~~e~~~v~ 80 (794) T protein:vir:10 1 MALISQSIKNLKGGISQQPDILRYPDQGSRQVNGWSSETEGLQKRPPLVFLKTLGDNGALGQAPYIHLINRDENEQYYAV 80 (794) T ss_pred CcceeeecchhhcccccCCchHHhhhhHhhhhcceeeeccCcccCcchhhheeccCCCccccceeeeEEecCCCceEEEE Confidence 6655 456665544333333334788999999887 5677776666555543221 111223332 111 Q ss_pred ------eEEeeCCeEEEeeCCC------CCCCc---------ceEEEcCCCee-eeeecccc------------ccCCcc Q lcl|Aclame:pro 92 ------FWFAWPDVVDVIRSPI------AQDPH---------GRIYYTDGRFP-KVTDATIA------------TKGDGN 137 (567) Q Consensus 92 ------~w~~w~~~V~~~~spi------a~D~~---------~Rvy~tgd~~p-~~t~~~ia------------t~g~g~ 137 (567) .+|--.+....+..+. +..+. ..+|++.-.+| +....... ...+|. T Consensus 81 ~~~~~irv~~~~G~~~~v~~~~~~~Y~~aa~~~~~l~~~q~aD~~fivn~~~~~~~~~~~~~~~~~~~~~~~~~~v~~g~ 160 (794) T protein:vir:10 81 FTGTGIRVFDLAGNEKQVRYPNGSNYIKTANPRSDLRMVTVADYTFIVNRNVVVQKDPNSVNLANYNPKQDGLINIRGGQ 160 (794) T ss_pred EeCCeEEEEEcCCcEEEEEcCCCCcceecCCCcceEEEEEEcCEEEEEcCCeeeeeeccccccCCCCCCccEEEEecccc Confidence 2222233222222111 11111 14566643332 21111111 111222 Q ss_pred cccccccccCCCCcccceeEecCCCCCCCCcccc-----------------------ceeeEEEEE----EEecCCCccC Q lcl|Aclame:pro 138 HPTSSYRLGIPAPTTAPVCTVQQGGDVSDDNPND-----------------------DETRFYTET----FVSDYGEEGP 190 (567) Q Consensus 138 ~p~~~y~LgVpaP~~ap~~~v~~g~~~~g~~~~d-----------------------~et~~Y~~T----fVt~~GeES~ 190 (567) +. ..|.+.+.....+ +.....++........+ ...+.|.+. -+...-.++. T Consensus 161 y~-r~y~i~i~~~~~a-t~~tpdgt~~~~~~~~s~~~ia~~L~~~l~a~~~g~t~~~~g~~i~i~a~s~~~~~t~s~~~~ 238 (794) T protein:vir:10 161 YG-RELIVHINGKDVA-TYKIPDGSKPEHVNNTDAQWLAERLAKQMRINLSGWTVNVGQGFIHVTAPSGQQIDSFTTKDG 238 (794) T ss_pred cc-eEEEeccCCccee-EEEecCCCCcccceecchhhhhhhhhhhhhcccCCceEEeCCeEEEEEeccCceeccccccCC Confidence 21 1244444333221 11111111110000000 001112210 0111000110 Q ss_pred C-cccceeEEEecCCCEEEEccccCCCCCCccceEEEEEEEcCCCCeeEEEEEecc----------CceeeEEeccCccc Q lcl|Aclame:pro 191 P-GPASLEVTLRTPGTAVQLTLAPVPLQNASIKRRRIYRSASGGGEADFLLVAELD----------ASVLSYTDKIPAKN 259 (567) Q Consensus 191 p-S~~S~~v~v~~~g~~V~L~~~p~~~~~~~it~~RIYRs~tggg~~e~~lVael~----------~st~sy~D~~~~~~ 259 (567) . ......+ .. .++... ..|....+-..++|=- ..+....+|++-.+-. .....+........ T Consensus 239 ~~~~~~~~v--~~---~~~~~~-~lp~~~~~G~~v~i~~-~~~~~~~~yyv~~~~~~~~w~E~~~~g~~~~~~~~tmP~~ 311 (794) T protein:vir:10 239 YADQLINPV--TH---YAQSFS-KLPPNAPNGYMVKIVG-DASKSADQYYVRYDAERKVWTETLGWNTENQVLLETMPHA 311 (794) T ss_pred cCcceeEEE--Ee---ccCcce-ecccCCCCCcEEEEEe-CCCCCcceeEEEEEcCCcEEEEecccceeEEEecccceeE Confidence 0 1100011 00 011100 0011111111122210 0011111222211100 00011111100000 Q ss_pred cC------cccchhhcc----------CCCC-CCce--eeeecCcEEEEEECCEEEEecCCCcccC-chh-hceecc--- Q lcl|Aclame:pro 260 LG------PSLATWDYL----------PPPE-NMTG--LCLMANGIAAGFAGNEVMFSEAYLPYAW-PEV-NRHTTA--- 315 (567) Q Consensus 260 Lg------~~L~t~~~~----------~Pp~-~~~~--l~~~~NG~l~~a~Gn~l~FSEp~~Phaw-p~~-y~~~~~--- 315 (567) |- -.+...+|. +.|. ..+. -+.++++||.-+.++.||+|..-.++-| |.. --++=+ T Consensus 312 l~r~~~~t~~~~~~~w~~r~~Gd~~tnp~psf~g~~~~~v~f~q~RL~f~~~~~v~~Srtgd~~nF~~~t~~~~~DdD~I 391 (794) T protein:vir:10 312 LVRAADGNFDFKWLEWSPKSCGDVDTNPWPSFVGSSINDVFFFRNRLGFLSGENIILSRTAKYFNFYPASIANLSNDDPI 391 (794) T ss_pred EEEeccceEEeeecccccccccccccCccCcccCCCccEEEEEcceEEEeeCCeEEEEecCCcccccccccccCCCCccE Confidence 00 001111121 1111 1111 2358899999889999999999988887 442 111112 Q ss_pred ---------cceEEEEEeCCeEEEEEcCcEEEEEcC---CcccceeEeecccCCcccccceeecCceEEEecCCcE---E Q lcl|Aclame:pro 316 ---------EDIVAICPLGTSLVVATKGEPYLFSGV---SPSTISGSKIPSMQACLSRRSMVAMEGFVLYAGTNGL---V 380 (567) Q Consensus 316 ---------~~Iv~i~pv~~gl~V~T~~~py~lsG~---~p~~m~~~~l~~~~pcvs~~siv~~~~~v~y~s~dGl---v 380 (567) ..|.-+.+++..|+++|.+.-|.|+|. +|.+..+.+ .....|.+.-..+..++.++|+++.|= + T Consensus 392 ~~~~ss~~~~~i~~~v~~~~~L~i~T~~~q~~l~~~~~lTP~~~~~~~-~s~~~~~~~~~Pv~vg~~v~f~~~~g~~~~~ 470 (794) T protein:vir:10 392 DVAVSTNRIAILKYAVPFSEELLIWSDEAQFVLTASGTLTSRSVELNL-TTQFDVQDRARPYGIGRNVYFASPRSSYTSI 470 (794) T ss_pred EEEecCCcceeeEEEeecCCcEEEEecCcEEEEeCCCcccceeEEEEE-EEeecccCCCCceEeCCeEEEEecCCCeeEE Confidence 335668888999999999999999987 444444332 344467776778889999999999882 1 Q ss_pred EE-cCCceeEeecccccchhHHh--hhcCccc---EEEEEEcCeEEEEEecCCCcceeEEEc--cCCcee-EEEeeeee- Q lcl|Aclame:pro 381 SV-DANGNVALATEQIVSPEQWQ--SQFNPAS---IVAYPWRGEYIACYTKPDGKQDVFVFS--PVNMDI-RYLSTPFD- 450 (567) Q Consensus 381 ~~-~~~G~~~~vt~~~~~~~~W~--~~l~P~t---i~a~~~~G~Y~~~y~~~~g~~~~~ifd--~~~~~~-~~~~~~~~- 450 (567) +- .+ .+..+++--+.+--+ ..+=|.. +.+..-+..=+.+.+..+++--++-|. -..+.+ -++...++ T Consensus 471 ~r~~~---~~~~~d~y~a~Dlt~~~~hl~~~~v~~~~~~~~~~~~~~~~~~~~~~l~~~~y~~~~~e~~v~aW~~~~~~g 547 (794) T protein:vir:10 471 HRYYA---VQDVSSVKNSEDITSHVPNYIPNGVFSICGSGTENFCSVLSHGDPSKIFMYKFLYLNEELRQQSWSHWDFGE 547 (794) T ss_pred EEEee---eccccCceehhhHHHHHHHhcCCceEEEEEeCCCCcEEEEEEcCCCEEEEEEEeecCCceEEEeEEEEEcCC Confidence 10 00 001111111111000 0111222 112222222222222222221122221 122221 22332232 Q ss_pred ---EEEEEecCCeEEEEeCC----EEEEEc----CCCCc-eeEE----EEeeeEEcCCC-----CceeEEE---EeeC-C Q lcl|Aclame:pro 451 ---CAWVDLAKDMMRVVTGD----KMSVLA----GGALP-STIR----WHSKIFSLPER-----TSFSCIR---VKSP-A 505 (567) Q Consensus 451 ---a~~~~~~~d~ly~~~g~----~i~~~~----~g~~~-~~~~----WrSK~f~~~~~-----~~f~~~~---V~~~-~ 505 (567) .+.-....|.||++..+ .+..+. ....+ .+++ ++ ..+..+.. .+.+-+. +.+. . T Consensus 548 ~~~~~~~~~~~d~l~~iv~r~~~~~~~r~~~~~~~~~~~~~~~~~~lD~~-~~~~~~~~~~~~~~~~t~~~~~~~~g~~~ 626 (794) T protein:vir:10 548 NVQVLACQSISSDMYVILRNEFNTFLARISFTKNAIDLQGEPYRAFMDMK-IRYTIPSGTYNDDTFTTSIHIPTIYGANF 626 (794) T ss_pred cEEEEEEEecCCeEEEEEEeCCCEEEEEEEEeecCCCCCCccceeeeecc-eEEEecCcccccccccceEEcccccCccc Confidence 11112357899997532 233332 11110 1111 11 11222211 1111111 1111 1 Q ss_pred cCceEEEEEECCeeeEe-ecCcccCC-cceEcCCcc-cc------e--EEEEE------------------EecceEEEE Q lcl|Aclame:pro 506 PERVGITIMADDVPVIH-FAPGTFKG-SVVRLPAAT-GQ------N--WQVMV------------------SGFGQVERI 556 (567) Q Consensus 506 ~~~~~~~i~~d~~~~~~-~~~~~~~~-~~~RLP~~~-~~------~--wqiei------------------~g~~~V~~i 556 (567) .+.-.+.+.+||..... .+...-+. --+++|..+ +. . .+||. .|..+++|+ T Consensus 627 ~eg~~v~~~adg~~~~~~~~~~~~~g~~~l~i~~~~~a~~v~vGl~y~s~~~~~~~~i~~~~~~~~~~~~~~gr~~l~r~ 706 (794) T protein:vir:10 627 GRGKITVLEPDGKITVFEQPTSGWQSDPWLRLSGNLEGREVFIGFNINFVYEFSKFLIKQTTDDGSTSTEDIGRLQLRRA 706 (794) T ss_pred ccccEEEEecCCceeeeeeeeeeeecceEEEecCCCCCceEEEeeeeeEEEEecceEEEccCCCcceeeeccccEEEEEE Confidence 23445566777754321 11111111 134555432 11 1 22221 122344555 Q ss_pred Eeecc-hhhhcC Q lcl|Aclame:pro 557 TLSTS-MSEMPV 567 (567) Q Consensus 557 ~la~s-~~EL~~ 567 (567) .+.-- -.++.| T Consensus 707 ~~~~~~tg~~~v 718 (794) T protein:vir:10 707 WVNYEDSGTFDI 718 (794) T ss_pred EEEeeccccEEE Confidence 43311 123333 No 47 >protein:vir:7329 Length: 825 # NCBI annotation: hypothetical protein # Family: family:all:780 # MgeID: mge:143 # MgeName: epsilon15 # Cross-refs: genbank:acc:NP_848220;genbank:gi:30387391;genbank:GeneID:2641863 Probab=29.56 E-value=1.6 Score=19.39 Aligned_cols=499 Identities=15% Similarity=0.121 Sum_probs=177.2 Q ss_pred ccceeehhhhccceeeccccccceeeeEEEecccccccCccchhcCc-------ccccceEEeeee-cCCeEeEeecccc Q lcl|Aclame:pro 2 MPIAILANSIINPLIFKPEAVKGISMPYIDITTMRGMMPRVVTSMLP-------EHSAVLAEDCHF-RFGVITPERQISG 73 (567) Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~M~~I~i~~f~G~~pr~~p~lL~-------~~~a~~A~N~~~-~~G~l~P~~~~~~ 73 (567) |+|.++-||+- +|| |.|+|.- .+.+..+.|.-. -.|.++-+.+-.. T Consensus 1 m~~~~~q~sF~-----------------------~GE---lsP~l~gR~Dl~~y~~g~~~~~N~~~~p~Gg~~rRpGt~f 54 (825) T protein:vir:73 1 MAFSWIQPSFA-----------------------GGE---IGPSLYGRIDMSKYQVALRKCDNFIVRQYGGVENRPGTRF 54 (825) T ss_pred Cccceeccccc-----------------------cce---echhhcccchHHHHHHHHHHhcCcEEEecCCceecCchHH Confidence 66655544431 233 2333322 567778888877 6777777766655 Q ss_pred ccccc-cccceEEEEE------------CCceEEeeCCeEEEe---------eCCCCCC---------CcceEEEcCCCe Q lcl|Aclame:pro 74 VEKTF-TIKPKTIFHY------------RDDFWFAWPDVVDVI---------RSPIAQD---------PHGRIYYTDGRF 122 (567) Q Consensus 74 v~~~~-~~~~~Tif~~------------~~~~w~~w~~~V~~~---------~spia~D---------~~~Rvy~tgd~~ 122 (567) ++... +....-|+.| .+.++..|.+.-.++ ..|-..+ ....+|++...+ T Consensus 55 va~~~~~~~~~rLipF~fs~~q~y~Lefg~~~lrv~~~gg~v~~~~~~~~e~~TPy~~~~l~~l~~~QsaD~~~i~h~~~ 134 (825) T protein:vir:73 55 VGPAKYPDRKCRLIPFQFSTVQTYALEFGHNYMRVIKDGAYVLTTSNVIYELAMPYADTDLFRIKFTQSADVLTLVHPAY 134 (825) T ss_pred hHhhcCCCCCEEEEEEEeCCCcEEEEEEeCCeEEEEeCCceEeccCCceEEEecccchhhhhhheeeeecCEEEEEcCCC Confidence 54322 2233334322 233444565433222 2332110 112677665444 Q ss_pred eeeeeccccccCCcc---cccccccccCCCCccc-ceeEecCCCCCCCCccccceeeEEEEEEEe-cCCCccCCcccc-- Q lcl|Aclame:pro 123 PKVTDATIATKGDGN---HPTSSYRLGIPAPTTA-PVCTVQQGGDVSDDNPNDDETRFYTETFVS-DYGEEGPPGPAS-- 195 (567) Q Consensus 123 p~~t~~~iat~g~g~---~p~~~y~LgVpaP~~a-p~~~v~~g~~~~g~~~~d~et~~Y~~TfVt-~~GeES~pS~~S-- 195 (567) |..+-.-. ++.. .+. .+..+...+... ....+... ..+..|..|... .++.+..+.... T Consensus 135 pp~~L~r~---~~~~W~l~~~-~f~~gp~~~in~~~sv~v~as----------g~tg~~TiTaS~a~~~~~~vG~~i~~~ 200 (825) T protein:vir:73 135 PPKELRRY---AHDNWQIVDV-TTKNGPFEDINVDETVKVYAS----------ASTGTITLTASSAIFGAEQVGKLFYLE 200 (825) T ss_pred ceeEEEEe---cCCCcEEEEE-eccCCccccccccccceeeec----------ccCceeEEEeeccccCchhcCeEEEEe Confidence 44221110 1100 000 000000000000 00000000 011222232211 122222111000 Q ss_pred -----------eeEEEe------cCCCEEEE-------ccccCCCCC----------Cccc--eEEEEEEEcCCCCeeEE Q lcl|Aclame:pro 196 -----------LEVTLR------TPGTAVQL-------TLAPVPLQN----------ASIK--RRRIYRSASGGGEADFL 239 (567) Q Consensus 196 -----------~~v~v~------~~g~~V~L-------~~~p~~~~~----------~~it--~~RIYRs~tggg~~e~~ 239 (567) ...... ..+..-.+ ...|....+ ...+ .++.+++ +.+...+- T Consensus 201 ~~~v~si~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~t~~~~a~~g~~~~~~~g~~~~~~~~~~~~~~~--~~g~~~it 278 (825) T protein:vir:73 201 QPAVDSVPVWETSKTTAINDVRRADSNYYRANTSGKTGTLRPSHTEGMSWDGWGGTGSDDTGIQWEYLHS--GFGIAKIT 278 (825) T ss_pred cccccccceeeeeeEEEeeeEEECCCceeeeecccccceeeccccCCceeEeeeeecccCCceEEEEEec--CCceEEEe Confidence 000000 00000000 000000000 0000 1112211 11111111 Q ss_pred EEEe----ccCceeeEEeccCccccCcccchhhccCCCCCCc----eeeeecCcEEEEE----ECCEEEEecCCCcccCc Q lcl|Aclame:pro 240 LVAE----LDASVLSYTDKIPAKNLGPSLATWDYLPPPENMT----GLCLMANGIAAGF----AGNEVMFSEAYLPYAWP 307 (567) Q Consensus 240 lVae----l~~st~sy~D~~~~~~Lg~~L~t~~~~~Pp~~~~----~l~~~~NG~l~~a----~Gn~l~FSEp~~Phawp 307 (567) -+.. .......|.+... ....-.++.|...+-... ..+.++++||.-+ ..+.||+|.+-.++-|- T Consensus 279 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~t~~~~~~~~~~~~gyPs~v~f~q~RL~f~g~~~~p~~v~~Srtgd~~nF~ 355 (825) T protein:vir:73 279 AVAGDGLTATADVVSFIPSQV---VGSANASYKWAKYAWNSVNGYPSTVVYYQQRLYFAASTAYPQTIWASRTGDYKDFG 355 (825) T ss_pred eccccceeeccccceeccccc---ccCCCCCcccccCCcccCCCCccEEEEEcceEEEeecCCCCCEEEEEccCCccccc Confidence 0000 0011112221110 111112333443332211 1245888888766 56999999988887763 Q ss_pred hhh--------ceecc----cceEEEEEeCCeEEEEEcCcEEEEEcC-----CcccceeEeecccCCcccccceeecCce Q lcl|Aclame:pro 308 EVN--------RHTTA----EDIVAICPLGTSLVVATKGEPYLFSGV-----SPSTISGSKIPSMQACLSRRSMVAMEGF 370 (567) Q Consensus 308 ~~y--------~~~~~----~~Iv~i~pv~~gl~V~T~~~py~lsG~-----~p~~m~~~~l~~~~pcvs~~siv~~~~~ 370 (567) ..- -+++. ..|..+.+++ .|+++|++.-|.++|. +|.+..+.+ .....|-. -..+..++. T Consensus 356 ~~~~~~DdD~I~~~~s~~~~~~i~~~~~~~-~L~~~t~~~e~~l~~~~~~~lTP~~~~~~~-~s~~g~~~-~~Pv~vg~~ 432 (825) T protein:vir:73 356 KNNPIQDDDRIIYTYAGRQVNEIRHLIDVG-NLVALTSGGEYTISGDQNKVLTPSAFSFSS-QGNNGSSN-VPPIAVANI 432 (825) T ss_pred cCCCCCCCccEEEEEcCCcceeEEEEeecC-cEEEEecCceEEEecCCCcccceeeEEEEe-eeeecccc-ccceEeCCe Confidence 211 12222 4477788885 7999999999999975 455544443 34556743 456778999 Q ss_pred EEEecCCcEEE------EcCCc-eeEeec---ccccc---hhHHhhhcCcccE-EEEEEcCeEEEEEecCCCcceeEEEc Q lcl|Aclame:pro 371 VLYAGTNGLVS------VDANG-NVALAT---EQIVS---PEQWQSQFNPASI-VAYPWRGEYIACYTKPDGKQDVFVFS 436 (567) Q Consensus 371 v~y~s~dGlv~------~~~~G-~~~~vt---~~~~~---~~~W~~~l~P~ti-~a~~~~G~Y~~~y~~~~g~~~~~ifd 436 (567) ++|.++.|=.+ ...++ ++.-+| +.++. -.+|...=+|.++ ....-+|.-+ ++-|+ T Consensus 433 ~~Fv~~~g~~vre~~~~~~~d~~~~~dlt~~a~hl~~~~~~~~~a~~~~p~~~~~~v~~dg~l~-----------~~ty~ 501 (825) T protein:vir:73 433 ALFIQEKGSVVRDLAYSFDVDGYQGTDLTILANHLFQKHSIVDWSFCIVPYSSAFCIRDDGKLL-----------VLTYL 501 (825) T ss_pred EEEEeCCCCeEEEEEEeeecCceeccchhhhhHhhccCCceEEEEEcCCCceEEEEEecCCeEE-----------EEEEe Confidence 99999998221 11111 011111 22332 1234222244443 3344444433 33333 Q ss_pred cCCceeEEEeeeee------EEEEEecCCeEEEEe-----CCE---EEEEcCCC---CceeEEEEeeeEEcCCCCceeEE Q lcl|Aclame:pro 437 PVNMDIRYLSTPFD------CAWVDLAKDMMRVVT-----GDK---MSVLAGGA---LPSTIRWHSKIFSLPERTSFSCI 499 (567) Q Consensus 437 ~~~~~~~~~~~~~~------a~~~~~~~d~ly~~~-----g~~---i~~~~~g~---~~~~~~WrSK~f~~~~~~~f~~~ 499 (567) ...+-.-++...++ |....-..|.||++- |.. |-.++... ..-.+.=.++.-.-+.++..+.. T Consensus 502 ~~q~v~aW~~~~~~g~v~~~~~i~~~~~D~l~~iV~R~~~g~~~~yiE~~~~~~~~~~~~~~~vD~g~~~~g~~~~~~l~ 581 (825) T protein:vir:73 502 RDQQVFAWAPQSSAGKYESTCSISEGSEDAVYFVVNRTINGQTVRYIERLSSRLFTNDEDAFFVDCGLSYDGRNTSSRTM 581 (825) T ss_pred ccccceeeEEEecCCcEEEEEEecCCCccEEEEEEEEeeCCceEEEEEEecccccCCCcceeEEEEEeeecccceeecee Confidence 33222223333333 333344468899864 222 22222110 00001111111111112211111 Q ss_pred EEeeCCcCceEEEEEECCe--------eeEeecCcccCCcceEcCCc---------ccceEEEEEEecce--EEEEEeec Q lcl|Aclame:pro 500 RVKSPAPERVGITIMADDV--------PVIHFAPGTFKGSVVRLPAA---------TGQNWQVMVSGFGQ--VERITLST 560 (567) Q Consensus 500 ~V~~~~~~~~~~~i~~d~~--------~~~~~~~~~~~~~~~RLP~~---------~~~~wqiei~g~~~--V~~i~la~ 560 (567) -+++ -.+.+.+||. .+. +.... ..-++||-. .++.-...+.+... +.+++... T Consensus 582 ~l~g-----~tv~~~~~g~~~~~v~~g~it-l~~~~--~~~i~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~v~v~~~~ 653 (825) T protein:vir:73 582 TISG-----GTGDWSYQVDYPVTVSGGAYF-VNTDV--GAQIQFPYTGTDPDTNEPVAKELRGDIISVTSNTAVVVRFNR 653 (825) T ss_pred eeCC-----ceEEEEeCCeEEEEEcCCeEE-ecccc--eEEEEecccCcccccccceeceeeEEEccccCceEEEEEecc Confidence 1111 1122223321 110 00000 011334332 11111111222211 11111111 Q ss_pred c-----------hhhhcC Q lcl|Aclame:pro 561 S-----------MSEMPV 567 (567) Q Consensus 561 s-----------~~EL~~ 567 (567) . ....++ T Consensus 654 ~~~a~~~~~~~t~~~~a~ 671 (825) T protein:vir:73 654 NVPPVLRNVATTNWQMAR 671 (825) T ss_pred cccceeeeecccCCCcch Confidence 1 111111 Done!