Query lcl|Aclame:protein:vir:5833|NCBI_annot:similar to tail sheath protein|genbank:acc:NP_835619;genbank:gi:30044022 Match_columns 742 No_of_seqs 206 out of 754 Neff 5.6 Searched_HMMs 1612 Date Sat Nov 30 15:22:04 2013 Command /home/guerois/workspace/virfam/python/lib/hhsearch//hhsearch2 -i .//seq/seq_32 -d /home/guerois/workspace/virfam/python/profile_database/capsid_neck_tail.hhm -glob -cpu 7 -o .//seq/HHR/seq_32_vs_rec_db.hhr No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM 1 protein:vir:5833 Length: 742 # 100.0 0E+00 0E+00 1844.5 69.8 742 1-742 1-742 (742) 2 protein:vir:80984 Length: 666 100.0 1.3E-79 8E-83 453.1 41.1 566 149-742 1-657 (666) 3 protein:vir:6594 Length: 666 # 100.0 1.4E-77 8.4E-81 442.0 44.1 593 1-742 5-657 (666) 4 protein:vir:106984 Length: 743 100.0 1.1E-76 6.8E-80 437.0 49.1 653 1-742 3-738 (743) 5 protein:vir:98263 Length: 664 100.0 6.5E-77 4E-80 438.3 47.4 584 1-742 5-656 (664) 6 protein:vir:108052 Length: 660 100.0 5.4E-77 3.3E-80 438.7 44.0 566 149-742 1-653 (660) 7 protein:vir:106427 Length: 679 100.0 1.1E-77 6.9E-81 442.5 40.2 558 149-742 1-671 (679) 8 protein:vir:103456 Length: 659 100.0 2.3E-76 1.4E-79 435.3 43.5 560 149-742 1-652 (659) 9 protein:vir:7206 Length: 659 # 100.0 2.1E-76 1.3E-79 435.4 41.4 568 149-742 1-652 (659) 10 protein:vir:5663 Length: 671 # 100.0 6.7E-76 4.2E-79 432.7 41.1 566 149-742 1-667 (671) 11 protein:vir:100539 Length: 663 100.0 6.5E-76 4E-79 432.8 39.5 554 149-742 1-654 (663) 12 protein:vir:6894 Length: 660 # 100.0 9.9E-75 6.1E-78 426.3 44.8 583 1-742 5-652 (660) 13 protein:vir:101187 Length: 663 100.0 8.1E-75 5E-78 426.8 44.0 571 1-742 2-654 (663) 14 protein:vir:104858 Length: 729 100.0 1.3E-74 8.2E-78 425.6 44.8 649 1-742 1-723 (729) 15 protein:vir:101804 Length: 663 100.0 1.8E-75 1.1E-78 430.4 39.4 558 149-742 1-654 (663) 16 protein:vir:79092 Length: 477 100.0 3.3E-75 2E-78 428.9 33.3 439 238-742 1-473 (477) 17 protein:vir:104477 Length: 749 100.0 9.8E-72 6.1E-75 409.9 51.0 654 1-742 4-745 (749) 18 protein:vir:107865 Length: 477 100.0 1.1E-74 7E-78 426.0 33.4 442 238-742 1-473 (477) 19 protein:vir:98553 Length: 395 100.0 6.4E-75 4E-78 427.3 28.8 361 338-742 1-391 (395) 20 protein:vir:79181 Length: 390 100.0 5.7E-74 3.5E-77 422.1 28.5 362 338-742 1-386 (390) 21 protein:vir:78206 Length: 390 100.0 6.7E-74 4.1E-77 421.8 28.9 363 338-742 1-384 (390) 22 protein:vir:103993 Length: 390 100.0 6.7E-74 4.1E-77 421.8 28.9 363 338-742 1-384 (390) 23 protein:vir:5711 Length: 396 # 100.0 6.3E-74 3.9E-77 421.9 28.5 362 338-742 1-389 (396) 24 protein:vir:1845 Length: 392 # 100.0 1.1E-73 6.5E-77 420.7 28.7 362 338-742 1-388 (392) 25 protein:vir:100323 Length: 393 100.0 1.2E-73 7.5E-77 420.3 28.5 365 336-742 1-386 (393) 26 protein:vir:6079 Length: 396 # 100.0 1.1E-73 6.7E-77 420.6 26.9 361 334-742 1-389 (396) 27 protein:vir:79141 Length: 391 100.0 1.7E-73 1E-76 419.5 27.5 361 338-742 1-386 (391) 28 protein:vir:1172 Length: 391 # 100.0 9E-73 5.6E-76 415.6 29.6 363 338-742 1-385 (391) 29 protein:vir:2035 Length: 396 # 100.0 5.1E-73 3.1E-76 416.9 27.6 361 338-742 1-389 (396) 30 protein:vir:96740 Length: 388 100.0 1.6E-71 9.8E-75 408.8 31.2 359 338-742 1-385 (388) 31 protein:vir:10336 Length: 386 100.0 2.3E-70 1.4E-73 402.4 28.9 362 338-742 1-385 (386) 32 protein:vir:98824 Length: 774 100.0 4.9E-65 3E-68 373.1 44.8 652 1-742 1-773 (774) 33 protein:vir:79798 Length: 717 100.0 6.8E-49 4.2E-52 284.7 36.6 619 1-736 12-717 (717) 34 protein:vir:7653 Length: 581 # 100.0 1.2E-35 7.4E-39 212.0 33.6 511 185-742 1-572 (581) 35 protein:vir:107310 Length: 581 100.0 2.7E-35 1.7E-38 210.1 33.1 536 116-742 1-572 (581) 36 protein:vir:80779 Length: 569 100.0 1.4E-33 8.5E-37 200.7 33.6 510 183-741 1-569 (569) 37 protein:vir:80488 Length: 562 100.0 1.6E-32 1E-35 194.8 37.3 518 145-741 1-562 (562) 38 protein:vir:63742 Length: 562 100.0 6.4E-33 4E-36 197.1 33.1 516 156-741 1-562 (562) 39 protein:vir:95741 Length: 587 100.0 3.8E-29 2.4E-32 176.4 37.2 526 145-741 1-587 (587) 40 protein:vir:99306 Length: 587 100.0 2.1E-28 1.3E-31 172.4 34.3 528 145-741 1-587 (587) 41 protein:vir:96586 Length: 587 99.9 2.9E-27 1.8E-30 166.1 34.9 524 150-741 1-587 (587) 42 protein:vir:103168 Length: 641 99.9 3.3E-27 2.1E-30 165.7 31.5 556 1-639 5-641 (641) 43 protein:vir:100829 Length: 607 99.9 6.7E-26 4.2E-29 158.6 30.9 510 170-742 1-602 (607) 44 protein:vir:102957 Length: 437 99.9 4.1E-25 2.6E-28 154.3 28.2 412 261-735 1-437 (437) 45 protein:vir:102819 Length: 648 99.9 1.7E-23 1.1E-26 145.4 32.3 532 150-739 1-648 (648) 46 protein:vir:101326 Length: 529 99.9 9.7E-23 6E-26 141.3 24.3 477 206-736 1-529 (529) 47 protein:vir:105470 Length: 451 99.9 4.4E-21 2.7E-24 132.2 31.4 422 264-735 1-451 (451) 48 protein:vir:78986 Length: 436 99.8 9.9E-19 6.2E-22 119.3 25.7 406 262-735 1-436 (436) 49 protein:vir:102359 Length: 356 99.6 3.3E-15 2.1E-18 100.0 22.8 318 356-734 1-356 (356) 50 protein:vir:80052 Length: 331 98.5 5.2E-07 3.2E-10 55.0 26.6 304 388-736 1-331 (331) 51 protein:vir:5260 Length: 502 # 98.4 7.3E-07 4.6E-10 54.2 28.4 450 220-736 1-502 (502) 52 protein:vir:95263 Length: 450 98.3 1.2E-06 7.3E-10 53.1 25.6 391 310-737 1-450 (450) 53 protein:vir:78782 Length: 370 98.3 1.3E-06 8.2E-10 52.8 22.6 333 343-742 1-369 (370) 54 protein:vir:3751 Length: 376 # 98.2 3.3E-06 2.1E-09 50.6 22.4 314 401-740 1-376 (376) 55 protein:vir:489 Length: 498 # 98.2 3.4E-06 2.1E-09 50.5 20.8 432 236-739 1-498 (498) 56 protein:vir:4517 Length: 498 # 98.1 4.5E-06 2.8E-09 49.9 21.0 433 236-739 1-498 (498) 57 protein:vir:3788 Length: 376 # 98.1 5.1E-06 3.2E-09 49.6 22.7 312 401-739 1-376 (376) 58 protein:vir:276 Length: 369 # 98.0 8.2E-06 5.1E-09 48.5 23.4 331 365-739 1-369 (369) 59 protein:vir:4463 Length: 498 # 97.7 2.9E-05 1.8E-08 45.4 20.0 431 236-739 1-498 (498) 60 protein:vir:3165 Length: 426 # 96.6 0.00048 3E-07 38.8 17.0 387 319-736 1-426 (426) 61 protein:vir:1996 Length: 495 # 96.0 0.0011 7E-07 36.8 21.4 432 235-734 1-495 (495) 62 protein:vir:96104 Length: 504 95.7 0.0016 1E-06 35.9 25.4 437 262-735 1-504 (504) 63 protein:vir:3636 Length: 501 # 94.5 0.0044 2.7E-06 33.5 28.3 436 256-736 1-501 (501) 64 protein:vir:101576 Length: 501 90.1 0.023 1.4E-05 29.6 28.4 436 256-736 1-501 (501) 65 protein:vir:99586 Length: 507 89.3 0.027 1.7E-05 29.2 28.0 436 278-735 1-507 (507) 66 protein:vir:106730 Length: 501 85.7 0.051 3.1E-05 27.7 25.6 436 256-736 1-501 (501) 67 protein:vir:94073 Length: 494 70.8 0.2 0.00013 24.4 26.9 431 261-736 1-494 (494) 68 protein:vir:107720 Length: 515 70.2 0.21 0.00013 24.3 24.6 435 264-735 1-515 (515) 69 protein:vir:78611 Length: 501 64.8 0.29 0.00018 23.5 30.0 436 256-736 1-501 (501) No 1 >protein:vir:5833 Length: 742 # NCBI annotation: similar to tail sheath protein # Family: family:all:661 # MgeID: mge:123 # MgeName: RM 378 # Cross-refs: genbank:acc:NP_835619;genbank:gi:30044022 Probab=100.00 E-value=0 Score=1844.46 Aligned_cols=742 Identities=100% Similarity=1.461 Sum_probs=714.6 Q ss_pred CeeeeeeeeeeEeccccCCchhhheeeeecCCCCcccceeechhHHhhcccceeeeehhhhcCcceEEEEccCCcccccc Q lcl|Aclame:pro 1 MYRVNVKEVDLSITPEVGTPVQTALVGAFDLPIPSELPVSVTPDEFRRVGSTELSLIADSLVGGQEVTVIRPRGETQSLN 80 (742) Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (742) |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (742) T protein:vir:58 1 MYRVNVKEVDLSITPEVGTPVQTALVGAFDLPIPSELPVSVTPDEFRRVGSTELSLIADSLVGGQEVTVIRPRGETQSLN 80 (742) T ss_pred CeeeeeeeeeeeeccccCCchhhheeeeecCCCCccccceechhHHhhcccceeeehhhhhcCcceEEEEccCCcccccc Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred eeEEEEecceeeehhhheeeeeeeecccCCCcccceeEEEEEccCCCeeEEEeeecCCCcceeEEEEEeeceeEeecccc Q lcl|Aclame:pro 81 AAFVVVGGYNVTLGAFNVFYLMFLGYDPQKGYTDVSYVDVQLAGTPTDTILFSYSLDGSSTTHSLTINLNAPSVTLPSNI 160 (742) Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (742) ||||||||||||||||||||||||||||||||||||||||||||+||||||||||||||||+|||||||||||||||||| T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (742) T protein:vir:58 81 AAFVVVGGYNVTLGAFNVFYLMFLGYDPQKGYTDVSYVDVQLAGTPTDTILFSYSLDGSSTTHSLTINLNAPSVTLPSNI 160 (742) T ss_pred eeEEEEecceeeehhhheeeeeeeecccCCCcccceeEEEEEccCCCeeEEEeeecCCCcceeEEEEEeeceeEeecccc Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred eeeeeeeccccceEEEEeecCccccEEEEeecCCCcceEeecccCCCcceeeeeecccccccccCcccceeeEEEeeeee Q lcl|Aclame:pro 161 VPLFFYYEPYTGSITLQSSVNYSGLTLNYTVSKATTPWVYFAEYGTPTSSLTLYKGFYLEGIDLNSFNKQFVVSIENITV 240 (742) Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (742) ||+|||||||||||||||++||+++|++||++|+++|||||||||+|||||||||||||||||||||||||||+||||++ T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (742) T protein:vir:58 161 VPLFFYYEPYTGSITLQSSVNYSGLTLNYTVSKATTPWVYFAEYGTPTSSLTLYKGFYLEGIDLNSFNKQFVVSIENITV 240 (742) T ss_pred ceeeeEeccccceEEEeeecccCCCcccceeeeeecCcccccccCCCccceeeeecccccccccCcccceeeEEEeeeee Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred cccCCceeccceeEEEEEeeccCCCCCccceeeeeeecCCCCCeeeecccCceEEEEcCceEEecccccCCcceEEEEec Q lcl|Aclame:pro 241 NREKGQVLYPSFDVVVHFRDIRGVSANTEYIRFRQVNLNPESPNYIERVIGNMTFEFDGERIVTGGEYPNQVPFLRVVVS 320 (742) Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vtG~~~~n~~p~L~~si~ 320 (742) |||||||+|||||+|||||||||||+|||||||||||||||||+|+|+|||||||+++|+|||||++++||+|+|+|+++ T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~n~~~~~~~~~~ 320 (742) T protein:vir:58 241 NREKGQVLYPSFDVVVHFRDIRGVSANTEYIRFRQVNLNPESPNYIERVIGNMTFEFDGERIVTGGEYPNQVPFLRVVVS 320 (742) T ss_pred cccCCceeccceeEEEEEeeccCCCCCccceeeeeeecCCCCcceeeecccceeeeeccceeeecccccccccceeeEec Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred cccccccccchhhhhhhhhhheecccceEEEEEEEEEeeeccccccccchhhheeeeecccccceeeeeecccccccccc Q lcl|Aclame:pro 321 QDIKQNVAGVEKWVPVGFEGIYSVGDFTVIVNELTNVSIPVTDSAIIPPMRFTRIEQITLSGGASFSVISNQPYGFNIQD 400 (742) Q Consensus 321 ~~~~~~~ag~s~~ip~al~aI~avg~~tv~v~~itnv~~p~tdsa~vp~~~~~li~~~~l~~ga~~~vl~~~~~~~~i~~ 400 (742) ++.+|++++++.|+|..+++++++|++.+..+.++++.+|.+|++..|...+...+...+.+|+.+.+.+.++.++.+.+ T Consensus 321 ~~~~~~~~~~s~~~~~~~~~~~~v~d~~~~~~~~~~v~~~~t~~~~~pp~~~~~~e~v~~ngG~~f~v~s~~~~g~~i~~ 400 (742) T protein:vir:58 321 QDIKQNVAGVEKWVPVGFEGIYSVGDFTVIVNELTNVSIPVTDSAIIPPMRFTRIEQITLSGGASFSVISNQPYGFNIQD 400 (742) T ss_pred cccCcCccceeEEEeccccccccccceeeeccccccceeeccccccCCcccccccceeecccCcceEEEEecccCcceec Confidence 99999999999999999999999999999999999999999999999988888888778899999999998988988888 Q ss_pred cccceeeeccCCcceeeecccccccccccceeEeecccccccccceeeeccCCcceEEEecCCccccccccccccccccc Q lcl|Aclame:pro 401 SRHSYWLSPFKDDELIIGTELVLPALDVSTEFGVSSWEEALPEFSFLMPFQGGSDGYIRVDENEPDTIGRVKITPALLAN 480 (742) Q Consensus 401 s~~~~~Ls~l~d~s~~v~td~~a~a~d~s~~v~l~~~~~~~p~a~~av~l~gGtdg~i~vd~~~~~~ig~~~~~~~~~a~ 480 (742) ....+++..+.+++.+.+++......+..........+..++.......++||.++.........+.++.....+...++ T Consensus 401 ~~as~~~s~ln~~~~V~Gt~aa~~~~d~~t~~~v~s~~~alp~~a~sv~laGG~dg~v~v~~~~~D~iG~~~~~d~~~ad 480 (742) T protein:vir:58 401 SRHSYWLSPFKDDELIIGTELVLPALDVSTEFGVSSWEEALPEFSFLMPFQGGSDGYIRVDENEPDTIGRVKITPALLAN 480 (742) T ss_pred cCcceEEeccCCceEEEeehhhccccccchheeccccccccceeeEEEeecCCccccccccCCCcccccccccccccccc Confidence 88889999999888888888776666655555566666677777777888999999888887777888877777777889 Q ss_pred hhhHHHhhccCCccEEEEcCCCchHHHHHHHHHHHhhcCceEEEEECCCCCChHHHHHHHHhccCCcEEEEEecceeecc Q lcl|Aclame:pro 481 YERLLPLLTEDQFDLVLTPYLTFADHAGTVNAFINRAENRFLYLFDIAGDDDTENLAISLAGYINSSFATTFFPWVRRLT 560 (742) Q Consensus 481 rtGL~AL~~~d~v~LL~aPg~t~s~v~aal~Al~a~a~~R~~aI~D~p~~~~t~~~A~a~r~~~~S~~aaL~~PwVkv~d 560 (742) ++||++|++.++++|+++||++++++++++.++|+.+++|++++.|+|.+.++.+.+.+++++++|+|+++||||+++.+ T Consensus 481 rTGL~ALlev~eVtILiAPG~t~~~v~aav~A~la~a~~Rl~vL~D~P~~~tt~~~A~a~r~~~nSsraaly~PwVkv~d 560 (742) T protein:vir:58 481 YERLLPLLTEDQFDLVLTPYLTFADHAGTVNAFINRAENRFLYLFDIAGDDDTENLAISLAGYINSSFATTFFPWVRRLT 560 (742) T ss_pred hhHHHHhhhcCCCcEEEEcCCCchHHHHHHHHHHHhhcCCeEEEEecCCCCchHHHHHHHHhccCCceEEEEeceeeecc Confidence 99999999999999999999999999999999999999999999999999888888999999999999999999999999 Q ss_pred ccceeEechHHHHHHHHhhhccCceeecCCceeeEeeeccccchhHHhhhcCCceEEEEcCCCEEEEcceecCCCccccc Q lcl|Aclame:pro 561 NKGMRTVPASLAAYRSIRTTDPETGLAPVGARRGVVTGEPVRQVDWEDLYNNRINPIVRVGNDVLLFGQKTMLNVNSALN 640 (742) Q Consensus 561 ~~~~~~vPpSgavAGl~ArtD~e~Gv~~SPaN~~I~~~~~ls~sE~d~LN~~GINtI~~fg~G~rlWGnRTlas~D~~wr 640 (742) ++..+++|||+++||++||+|.++|+|+||+|+++.......++|++.||++|||||++|++||++||+||++++|++|+ T Consensus 561 ~~~~r~vPpSgaIAGL~ARtD~erGvw~SPANrgii~~~~~s~se~d~LN~~GINtIrsfG~G~rlWGnRTlassDs~wr 640 (742) T protein:vir:58 561 NKGMRTVPASLAAYRSIRTTDPETGLAPVGARRGVVTGEPVRQVDWEDLYNNRINPIVRVGNDVLLFGQKTMLNVNSALN 640 (742) T ss_pred CCcceeechHHHHHHHHHHhccCCceEecCCcceeeeccccchhhHHHHhhCCceEEEECCCcEEEEcceecCCCCcccc Confidence 99999999999999999999999999999999999988889999999999999999999999999999999988999999 Q ss_pred eeehhhhhHHHHHHHHHHHHHhhcccCCHHHHHHHHHHHHHHHHHHHhCCceeeEEEEEcCCCCHHHhhCCEEEEEEEEE Q lcl|Aclame:pro 641 RINVRRLLIVMRNRISQILSSYLFENNTSENRLRAEALVRQYLESLRLRGAVTDYEVAIDSVTTPTDIDNNTLRARVTVQ 720 (742) Q Consensus 641 fInVRR~~d~Ie~sI~~a~~~~VfEPNd~~l~~~V~~sInafL~~L~~~GAL~Gf~V~~DetNtp~dI~~GrL~i~I~va 720 (742) ||++||||+||+++|+++++|+||||||+.+|++|+++|++||++||++|+|+||+|+||++|||+||++|+|+++|+++ T Consensus 641 yInVRRlfd~Ie~SI~~a~q~~VfEPNd~~L~~sIk~sInafL~~L~aqGALlGfrV~lDetNTpeDI~~Gklvv~I~vA 720 (742) T protein:vir:58 641 RINVRRLLIVMRNRISQILSSYLFENNTSENRLRAEALVRQYLESLRLRGAVTDYEVAIDSVTTPTDIDNNTLRARVTVQ 720 (742) T ss_pred eEeehhhHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeEEEEcCCCCHHHhhCCEEEEEEEEE Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred ecCCceEEEEEEEEeeceeecC Q lcl|Aclame:pro 721 PARSIEYIDITFVITPTGVEIT 742 (742) Q Consensus 721 P~~PAEfI~l~f~it~tG~~fs 742 (742) |++|||||+|+|+++++|++|| T Consensus 721 P~~PAEfI~lrf~it~tga~Fs 742 (742) T protein:vir:58 721 PARSIEYIDITFVITPTGVEIT 742 (742) T ss_pred ccCCcceEEEEEEEEecccccC Confidence 9999999999999999999999 No 2 >protein:vir:80984 Length: 666 # NCBI annotation: gp18 tail sheath protein # Family: family:all:661 # MgeID: mge:1888 # MgeName: Phi1 # Cross-refs: genbank:acc:YP_001469499;genbank:gi:157311456;genbank:GeneID:5602117 Probab=100.00 E-value=1.3e-79 Score=453.08 Aligned_cols=566 Identities=19% Similarity=0.202 Sum_probs=289.9 Q ss_pred eeceeEeecccceeeeeeeccccceEEEEee-cCccccEEEEeecCCC-cceE------eecccCCCcceeeeeeccccc Q lcl|Aclame:pro 149 LNAPSVTLPSNIVPLFFYYEPYTGSITLQSS-VNYSGLTLNYTVSKAT-TPWV------YFAEYGTPTSSLTLYKGFYLE 220 (742) Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~------~~~~~~~~~~~~~~~~~~~~~ 220 (742) ||| .- |=.|-=|-+ |+-....- ++ -.--+-++---|. .|.. |...||-|... -|-.|+.. T Consensus 1 ~~~---~~-----Pgvyv~e~~-~~~~~~~~~t~-~~~~vg~~~~gp~~~p~~i~~~~~~~~~fg~~~~~--~~~~~~~~ 68 (666) T protein:vir:80 1 MTL---LS-----PGFETKETT-LSTTIVQSATG-RAALVGKFQWGPAFQIIQVTNEVELVNKFGQPDNN--TADYFMSG 68 (666) T ss_pred Cce---ec-----CceEEEEec-CCccccccCcc-cceEEeccccCCCccceEecCHHHHHHhcCCccCc--cchHHHHH Confidence 111 12 333333332 33222211 11 1111222211111 2322 22446665542 23334444 Q ss_pred ccccCcccceeeEEEeeeeecccCCceeccceeEEEEEeeccCCCCCccceeee--eeecCCCC---------------- Q lcl|Aclame:pro 221 GIDLNSFNKQFVVSIENITVNREKGQVLYPSFDVVVHFRDIRGVSANTEYIRFR--QVNLNPES---------------- 282 (742) Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~---------------- 282 (742) ..=||+-++-+|+.+-+-.-.. ...-...++.....+..-.. ...+-++.+ +....... T Consensus 69 ~~f~~~g~~~~v~R~~~~~~~~-~a~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~ 145 (666) T protein:vir:80 69 ANFLQYGNDLRVVRVLNKEKAK-NATALAGNIEFEITNEGSNY--EVGDTIKIKHNRQDIETAGKVTKVDGDGKVKGVFI 145 (666) T ss_pred HHHhcCCCeEEEEEecCccccc-cccccccceeEEEeeccccc--cccccccccccCcccccCcceEEEeecceeeeeec Confidence 5556777788888763211100 00011122222221111000 001111100 00000000 Q ss_pred -----------CeeeecccCceEEEEcCce-------EEecccccCCcceEEEEecccccc--cc---ccchh-hhhhhh Q lcl|Aclame:pro 283 -----------PNYIERVIGNMTFEFDGER-------IVTGGEYPNQVPFLRVVVSQDIKQ--NV---AGVEK-WVPVGF 338 (742) Q Consensus 283 -----------~~~~~~~~~~~~~~~~g~~-------~vtG~~~~n~~p~L~~si~~~~~~--~~---ag~s~-~ip~al 338 (742) ......++.+.+.+..... -+++ ++++.+............ .. ..... -.| +. T Consensus 146 ~ta~~~~~a~~~~~~~~v~~~~~~~~~~~~~~~~~a~~V~~--~~~~~~~~~~~~~~a~~~~t~~~~~~~~~~~~~~-a~ 222 (666) T protein:vir:80 146 PTGKIIAHAKAIGVYPELDGDWTAEFTSSSGNGSAALSVTK--IVTDSGLLLTDLETSRANITNQTFLTKLQKYDMP-AV 222 (666) T ss_pred chhhhccccccccccceeeccceeeeccccccceeeeeeee--eecCCccceeeeccccccccccccccccccccch-hh Confidence 1111111122111111100 0000 001000000000000000 00 00000 000 00 Q ss_pred hhheecccceEEEEEEEEEeeeccccccccchhhheeeeecccccceeee--eeccccccc---ccccccceeeeccCCc Q lcl|Aclame:pro 339 EGIYSVGDFTVIVNELTNVSIPVTDSAIIPPMRFTRIEQITLSGGASFSV--ISNQPYGFN---IQDSRHSYWLSPFKDD 413 (742) Q Consensus 339 ~aI~avg~~tv~v~~itnv~~p~tdsa~vp~~~~~li~~~~l~~ga~~~v--l~~~~~~~~---i~~s~~~~~Ls~l~d~ 413 (742) .+.+....++.....+... .+.....+.................... ......... .....+.+.++...+. T Consensus 223 ~a~~~g~~g~~l~v~i~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~e~~~~~~~~~~ 299 (666) T protein:vir:80 223 SAIYAGEIGNSLEVEILAR---SAFKNTAPDLTMYPYGGERTAARNLIPYAPQNDNQYAFIVRRDGVVVESYVLSTLKGD 299 (666) T ss_pred hhhcccccccceeeeeccc---cccccccccceeeeccccccccceeeeeccccccceeeEeccCCccceeeeccccccc Confidence 0001000010000000000 0000000000000000000000000000 000000000 0001122223333333 Q ss_pred ceeeecccccccccc---cceeEeecccccccccceeeeccCCcceEEEecCCccccccccccccccccchhhHHHhhcc Q lcl|Aclame:pro 414 ELIIGTELVLPALDV---STEFGVSSWEEALPEFSFLMPFQGGSDGYIRVDENEPDTIGRVKITPALLANYERLLPLLTE 490 (742) Q Consensus 414 s~~v~td~~a~a~d~---s~~v~l~~~~~~~p~a~~av~l~gGtdg~i~vd~~~~~~ig~~~~~~~~~a~rtGL~AL~~~ 490 (742) +...+...+...... ...+.. ......+.......+.+|.+..... ....+.....+. ...++|+.++++. T Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~----~~~~~~~~~~g~-~~~~~~~~~~~~~ 373 (666) T protein:vir:80 300 KDVYGNSIYMDDFFGRGSSQYIYA-TAQGWVDGFSGIISLAGGVSANEAT----TGGVGADPFIGA-MMQGWGLFAERES 373 (666) T ss_pred ccccchhhhhhhhhccccceeeee-cccccccccceEEEecCCCCccccc----cccccccccccc-chhhhhhhhhhcc Confidence 322222222111100 011111 1111222223333444444332111 111111111111 1246789999998 Q ss_pred CCccEEEEcCCCc-----hHHHHHHHHHHHhhcCceE-------EEEECCCCCChHHHHHHHHh----------ccCCcE Q lcl|Aclame:pro 491 DQFDLVLTPYLTF-----ADHAGTVNAFINRAENRFL-------YLFDIAGDDDTENLAISLAG----------YINSSF 548 (742) Q Consensus 491 d~v~LL~aPg~t~-----s~v~aal~Al~a~a~~R~~-------aI~D~p~~~~t~~~A~a~r~----------~~~S~~ 548 (742) ..++++++|+++. +.++.++.++|+.+++++. +++|.|... +.+++.+|++ +++|+| T Consensus 374 ~~~~~l~~p~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~s~~ 452 (666) T protein:vir:80 374 IHVNLLIAGACAGEGDAFSTVQKHAVSIGDERQDCLVMVSPPRSTVVNIPVTT-AIDNLIAWREGSGNYNENNMNINTTY 452 (666) T ss_pred cccceEeecCcCCcccchHHHHHHHHHHHHhhcceEEEeecceeEEeecCCCC-CHHHHHHHHHhcccchhhhcccCcce Confidence 8899999999863 4567778888887765432 233444444 4566777775 478999 Q ss_pred EEEEecceeeccc--cceeEechHHHHHHHHhhhccCceeecCCceeeE---eee----ccccchhHHhhhcCCceEEEE Q lcl|Aclame:pro 549 ATTFFPWVRRLTN--KGMRTVPASLAAYRSIRTTDPETGLAPVGARRGV---VTG----EPVRQVDWEDLYNNRINPIVR 619 (742) Q Consensus 549 aaL~~PwVkv~d~--~~~~~vPpSgavAGl~ArtD~e~Gv~~SPaN~~I---~~~----~~ls~sE~d~LN~~GINtI~~ 619 (742) +++||||+++.|+ +..+++||||++||++||+|.++|+|+||+|+.+ .+. ..+++.|++.||++|||||++ T Consensus 453 ~~l~~p~~~~~d~~~~~~~~~p~sg~~AGl~Ar~D~~~g~~~sPan~~~~~i~g~~~~~~~~~~~~~~~Ln~~gIn~i~~ 532 (666) T protein:vir:80 453 AVIDGNYKYQYDKYNDVNRWVPLAADIAGLCARTDAVSQPWMSPAGYNRGQIMNVVKLAIEPRKAHRDRLYQAAINPVIG 532 (666) T ss_pred EEEEcCceEEecccCCceeEechHHHHHHHHHHHhhcCCceEccCCeecceeeccccceeecChhHHHhhhhCCeeEEEE Confidence 9999999999875 5678999999999999999999999999999853 222 346789999999999999999 Q ss_pred c-CCCEEEEcceecCCCccccceeehhhhhHHHHHHHHHHHHHhhcccCCHHHHHHHHHHHHHHHHHHHhCCceeeEEEE Q lcl|Aclame:pro 620 V-GNDVLLFGQKTMLNVNSALNRINVRRLLIVMRNRISQILSSYLFENNTSENRLRAEALVRQYLESLRLRGAVTDYEVA 698 (742) Q Consensus 620 f-g~G~rlWGnRTlas~D~~wrfInVRR~~d~Ie~sI~~a~~~~VfEPNd~~l~~~V~~sInafL~~L~~~GAL~Gf~V~ 698 (742) | ++|+++||+||+.+++++|+||||||||+||+++|++.++|+||||||+.+|++|+++|++||++||++|+|.||+|+ T Consensus 533 ~~g~G~~~wG~rT~~~~~s~~~~i~vRRl~~~i~~si~~~~~~~v~epn~~~l~~~i~~~i~~~L~~l~~~gal~g~~V~ 612 (666) T protein:vir:80 533 AGGEGFILMGDKTATTVPSPFDRINVRRLFNMLKKNIGDSSKYKLFENNDNFTRASFRMEVSQYLSTIRSLGGIYDFRVQ 612 (666) T ss_pred eCCCeEEEEccccCCCCCcccceeehhhHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhcCceeeeEEE Confidence 8 579999999999777789999999999999999999999999999999999999999999999999999999999999 Q ss_pred EcCC-CCHHHhhCCEEEEEEEEEecCCceEEEEEEEEeeceeecC Q lcl|Aclame:pro 699 IDSV-TTPTDIDNNTLRARVTVQPARSIEYIDITFVITPTGVEIT 742 (742) Q Consensus 699 ~Det-Ntp~dI~~GrL~i~I~vaP~~PAEfI~l~f~it~tG~~fs 742 (742) ||++ |+++||++|+|+++|+++|++|||||+|+|.++++|++|+ T Consensus 613 ~d~~~nt~~di~~G~~~~~i~~~P~~Pae~I~~~~~~~~~~~~~~ 657 (666) T protein:vir:80 613 CDTTNNTPDVIDRNEFVASMFIKPAKSINYIMLNFTAVATGSDFD 657 (666) T ss_pred EcCCCCCHHHhhCCeEEEEEEEEecCCcceEEEEEEEeecCccHH Confidence 9965 7789999999999999999999999999999999999999 No 3 >protein:vir:6594 Length: 666 # NCBI annotation: tail sheath protein # Family: family:all:661 # MgeID: mge:139 # MgeName: RB49 # Cross-refs: genbank:acc:NP_891725;genbank:gi:33620670;genbank:GeneID:1725344 Probab=100.00 E-value=1.4e-77 Score=442.00 Aligned_cols=593 Identities=20% Similarity=0.226 Sum_probs=299.7 Q ss_pred CeeeeeeeeeeEecc-ccCCchhhheeeeecCCCCcccceeec-hhHHhh-cccc-eee-----eehhhhcCcceEEEEc Q lcl|Aclame:pro 1 MYRVNVKEVDLSITP-EVGTPVQTALVGAFDLPIPSELPVSVT-PDEFRR-VGST-ELS-----LIADSLVGGQEVTVIR 71 (742) Q Consensus 1 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~-~~~-----~~~~~~~~~~~~~~~~ 71 (742) -=-|-|+|+|++.+- .|+|- -.++||-|.-- |-..|+.|| ..||+| .|.- +.+ ..+.-+-||...-|+| T Consensus 5 ~PgVyv~e~~~~~~i~~v~ts-~~~fvG~~~~G-p~~~p~~v~s~~~~~~~fG~~~~~~~~~~~~~~~f~ngg~~~~vvr 82 (666) T protein:vir:65 5 SPGFETKETTLSTTIVQSETG-RAALVGKFQWG-PAFQIIQVTNEVELVNKFGQPDNNTADYFMSGANFLQYGNDLRVVR 82 (666) T ss_pred cCceEEEEecCcccccccCcc-cceEEecccCC-CCccCEEecCHHHHHHHcCCccccchhHHHHHHHHHhcCceEEEEE Confidence 223678999876532 23333 45788887753 446687776 466744 4541 111 1223345666666666 Q ss_pred cCCcccccceeEEEEecceeeehhhheeeeeeeecccCCCcccceeEEEEEccCCCeeEEEeeecCCCcceeEEEEEeec Q lcl|Aclame:pro 72 PRGETQSLNAAFVVVGGYNVTLGAFNVFYLMFLGYDPQKGYTDVSYVDVQLAGTPTDTILFSYSLDGSSTTHSLTINLNA 151 (742) Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (742) --+.+...|+... . ++..+ ..+ +. |... T Consensus 83 v~~~~~~~~~~~~-~--------------------------~~~~~-~~~----------~~----g~~~---------- 110 (666) T protein:vir:65 83 VLNKEKAKNATAL-A--------------------------GNVEF-EIT----------NE----GSNY---------- 110 (666) T ss_pred ccCcccccccccc-c--------------------------Cceee-eEe----------ec----cccc---------- Confidence 5444444333110 0 00000 000 00 1100 Q ss_pred eeEeecccceeeeeeeccccceEEEEeecCccccEEEEeecCCCcceEeecccCCCcceeeeeecccccccccCccc-ce Q lcl|Aclame:pro 152 PSVTLPSNIVPLFFYYEPYTGSITLQSSVNYSGLTLNYTVSKATTPWVYFAEYGTPTSSLTLYKGFYLEGIDLNSFN-KQ 230 (742) Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 230 (742) .-|.+++-+.++... .+- .+...++ .+... .. T Consensus 111 ------------------------------~~g~~~~V~~~~~~~-----~~~-~~~~~~~-----------~~~~~~g~ 143 (666) T protein:vir:65 111 ------------------------------EVGDTIKIKHNRQDI-----ETA-GKVTKVD-----------GDGKVKGV 143 (666) T ss_pred ------------------------------cccceEEEEeccccc-----ccc-ccccccc-----------cccccccc Confidence 011111111111000 000 0000000 00000 01 Q ss_pred eeEEEeeeeecccCCceeccceeEEEEEeeccCCCCCccceeeeeeecCCCCCeeeecccCceEEEEcCceEEecc---- Q lcl|Aclame:pro 231 FVVSIENITVNREKGQVLYPSFDVVVHFRDIRGVSANTEYIRFRQVNLNPESPNYIERVIGNMTFEFDGERIVTGG---- 306 (742) Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vtG~---- 306 (742) |+-..+.+...+..|.+..-..+....+.. ..+..+.-+...+ ....++. ...++........+.-..... T Consensus 144 ~~~t~~~~~~~~~~g~~~~l~~~~~~~~~~--~~~~~~~a~sv~~--~~~~g~~-~~~~~~~a~~~~~~~~~~~~~~~~~ 218 (666) T protein:vir:65 144 FIPTGKIIAHAKAIGVYPELDGGWTAEFTS--SSGNGSAALSVTK--IVTDSGL-LLTDLETSRANITNQTFLTKLKKYD 218 (666) T ss_pred ccccceeeccccccCcceeEeeccceeecc--cCcccccceeeee--cccccce-eeeeecccccccccccccccccccc Confidence 111122222233333221111111122211 1110000000000 0000000 000000000000000000000 Q ss_pred -------cccCCcceEEEEeccccccccccchhhhhhhhhhheecccceEEEEEEEEEeeeccccccccchhhheeeeec Q lcl|Aclame:pro 307 -------EYPNQVPFLRVVVSQDIKQNVAGVEKWVPVGFEGIYSVGDFTVIVNELTNVSIPVTDSAIIPPMRFTRIEQIT 379 (742) Q Consensus 307 -------~~~n~~p~L~~si~~~~~~~~ag~s~~ip~al~aI~avg~~tv~v~~itnv~~p~tdsa~vp~~~~~li~~~~ 379 (742) ...+++..+++.+......... .+ .+. ++..+....... ..+.... T Consensus 219 ~~a~~A~~~g~~g~~i~v~i~~~~~~~~~-----~~-~l~-~~~~~~~~~~~~--------------------~~~~~~~ 271 (666) T protein:vir:65 219 MPAVSAIYAGEIGNSLEVEILARSAFKNT-----AP-DLT-MYPYGGERTAAR--------------------NLIPYAP 271 (666) T ss_pred cceeeeeeccccccceeEEeecccccccc-----cc-ccc-ccccccccccce--------------------eeecccc Confidence 0000001111111110000000 00 000 000000000000 0000000 Q ss_pred ccccceeeeeecccccccccccccceeeeccCCcceeeeccccccc---ccccceeEeecccccccccceeeeccCCcce Q lcl|Aclame:pro 380 LSGGASFSVISNQPYGFNIQDSRHSYWLSPFKDDELIIGTELVLPA---LDVSTEFGVSSWEEALPEFSFLMPFQGGSDG 456 (742) Q Consensus 380 l~~ga~~~vl~~~~~~~~i~~s~~~~~Ls~l~d~s~~v~td~~a~a---~d~s~~v~l~~~~~~~p~a~~av~l~gGtdg 456 (742) . ....+.+.... .+. ..+.+.++...+.+...+...+... ...+..+........ ........+.+|.++ T Consensus 272 ~-~~~~~~~~v~~-~g~----~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~~~~~~~~~g~~~ 344 (666) T protein:vir:65 272 Q-NDNQYAFIVRR-DGV----VVESYVLSTLKGDKDVYGNSIYMDDFFARGSSQYIYATAQGWV-DGFSGIISLAGGVSA 344 (666) T ss_pred c-ccccceeeeec-CCc----ccceeecccCcccccccchhhhhhhhhcccccceeeeeccccc-ccccceEEccCCCCc Confidence 0 00001110000 000 0111111111111111111000000 011111111111000 001122233444332 Q ss_pred EEEecCCccccccccccccccccchhhHHHhhccC--CccEEEEcCCCc-----hHHHHHHHHHHHhhcCceEEEEECC- Q lcl|Aclame:pro 457 YIRVDENEPDTIGRVKITPALLANYERLLPLLTED--QFDLVLTPYLTF-----ADHAGTVNAFINRAENRFLYLFDIA- 528 (742) Q Consensus 457 ~i~vd~~~~~~ig~~~~~~~~~a~rtGL~AL~~~d--~v~LL~aPg~t~-----s~v~aal~Al~a~a~~R~~aI~D~p- 528 (742) ... .....+........++|++++++.+ .++++++|++.. ..++.++.++|+.+++++ +++|+| T Consensus 345 ~~~-------~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~p~~~~~~~~~~~v~~~l~~~~~~~~~~~-a~~d~~~ 416 (666) T protein:vir:65 345 NEA-------TTGGVGADPFIGAMMQGWDLFAERESIHVNLLIAGACAGEGDAFSTVQKHAVSIGDERQDCL-VMVSPPR 416 (666) T ss_pred Ccc-------cccccccccccccHHHHHHHHhhhhhccCCceeecCcCCccchhHHHHHHHHHHHhhccceE-EEecccc Confidence 111 1111122222233566788777654 578999998764 466777888888776554 444443 Q ss_pred -------CCCChHHHHHHHHhc----------cCCcEEEEEecceeeccc--cceeEechHHHHHHHHhhhccCceeecC Q lcl|Aclame:pro 529 -------GDDDTENLAISLAGY----------INSSFATTFFPWVRRLTN--KGMRTVPASLAAYRSIRTTDPETGLAPV 589 (742) Q Consensus 529 -------~~~~t~~~A~a~r~~----------~~S~~aaL~~PwVkv~d~--~~~~~vPpSgavAGl~ArtD~e~Gv~~S 589 (742) .. ++.+.+.+|++. ++|+|+++||||+++.|+ +..+++|||+++||++||+|.++|+|+| T Consensus 417 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~p~~~~~d~~~~~~~~~p~sg~vAGl~Ar~D~~~g~~~s 495 (666) T protein:vir:65 417 STVVNIPVT-TAIDNLIAWREGSGNYNENNMNINTTYAVIDGNYKYQYDKYNDVNRWVPLAADIAGLCARTDAVSQPWMS 495 (666) T ss_pred ceeeecCCC-CCHHHHHHHHHhcccccccccccCcceEEEEcCceEEecccCCceeEechHHHHHHHHHHHhccCCcEEc Confidence 33 345667777763 779999999999998875 5678999999999999999999999999 Q ss_pred CceeeEe---ee----ccccchhHHhhhcCCceEEEEc-CCCEEEEcceecCCCccccceeehhhhhHHHHHHHHHHHHH Q lcl|Aclame:pro 590 GARRGVV---TG----EPVRQVDWEDLYNNRINPIVRV-GNDVLLFGQKTMLNVNSALNRINVRRLLIVMRNRISQILSS 661 (742) Q Consensus 590 PaN~~I~---~~----~~ls~sE~d~LN~~GINtI~~f-g~G~rlWGnRTlas~D~~wrfInVRR~~d~Ie~sI~~a~~~ 661 (742) |+|+.+. +. ..+++.|++.||++|||||++| ++|+++||+||++++|++|+||++||||+||+++|++.++| T Consensus 496 pan~~~~~i~g~~~~~~~~~~~~~~~Ln~~gIn~i~~~~~~G~~~wG~rT~~~~~s~~~~i~vrR~~~~i~~si~~~~~~ 575 (666) T protein:vir:65 496 PAGYNRGQIMNVVKLAIEPRKAHRDRLYQAAINPVIGAGGEGFILMGDKTATTVPSPFDRINVRRLFNMLKKNIGDSSKY 575 (666) T ss_pred cCCeecceeeccccceeecChhHHHhhhhCCceEEEEeCCCeEEEEecccCCCCCcccceEehhhHHHHHHHHHHHHHHH Confidence 9998532 22 3467889999999999999998 57999999999987788999999999999999999999999 Q ss_pred hhcccCCHHHHHHHHHHHHHHHHHHHhCCceeeEEEEEcCC-CCHHHhhCCEEEEEEEEEecCCceEEEEEEEEeeceee Q lcl|Aclame:pro 662 YLFENNTSENRLRAEALVRQYLESLRLRGAVTDYEVAIDSV-TTPTDIDNNTLRARVTVQPARSIEYIDITFVITPTGVE 740 (742) Q Consensus 662 ~VfEPNd~~l~~~V~~sInafL~~L~~~GAL~Gf~V~~Det-Ntp~dI~~GrL~i~I~vaP~~PAEfI~l~f~it~tG~~ 740 (742) +||||||+.+|++|+++|++||++||++|+|.||+|+||++ |++++|++|+|+++|+++|++|||||+|+|.++++|++ T Consensus 576 ~v~epn~~~l~~~i~~~i~~~L~~l~~~gal~g~~V~~d~~~nt~~~i~~G~~~~~i~~~p~~pae~i~~~~~~~~~~~~ 655 (666) T protein:vir:65 576 KLFENNDNFTRASFRMEVSQYLSTIRSLGGIYDFRVQCDTTNNTPDVIDRNEFVASMFIKPAKSINYIMLNFTAVATGSD 655 (666) T ss_pred hccCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeEEEEcCCCCCHHHhhCCeEEEEEEEEecCCcceEEEEEEEeecCcc Confidence 99999999999999999999999999999999999999965 77899999999999999999999999999999999999 Q ss_pred cC Q lcl|Aclame:pro 741 IT 742 (742) Q Consensus 741 fs 742 (742) |+ T Consensus 656 ~~ 657 (666) T protein:vir:65 656 FD 657 (666) T ss_pred HH Confidence 99 No 4 >protein:vir:106984 Length: 743 # NCBI annotation: contractile sheath protein gp18 # Family: family:all:661 # MgeID: mge:1459 # MgeName: S-PM2 # Cross-refs: genbank:acc:YP_195136;genbank:gi:58532913;uniprot:Q5GQN6;genbank:GeneID:3260481 Probab=100.00 E-value=1.1e-76 Score=437.01 Aligned_cols=653 Identities=20% Similarity=0.200 Sum_probs=304.8 Q ss_pred Ce---eeeeeeeeeEeccccCCch-hhheeeeecCCCCcccceeec-hhHH-hhccc-ceeee-----ehhhhcCcceEE Q lcl|Aclame:pro 1 MY---RVNVKEVDLSITPEVGTPV-QTALVGAFDLPIPSELPVSVT-PDEF-RRVGS-TELSL-----IADSLVGGQEVT 68 (742) Q Consensus 1 ~~---~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~-~~~~~-----~~~~~~~~~~~~ 68 (742) -| -|-|+|+|+...|-.|-+- ..|+||-|.-- |-..|+.|+ ..|| |..|. ++-+. -+.-+-||.+.- T Consensus 3 ~~~~Pgvyv~e~~~~~~~i~~~~t~~~~~vg~~~~G-p~~~p~~i~s~~~~~~~fG~~~~~~~~~~~v~~~f~ngg~~~~ 81 (743) T protein:vir:10 3 SQVSPGILIKERDLTNAVVTGALQIRAAHASTFAKG-PIGDIVNINTQKELVSVFGEPKEDNAEDWMVASEFLNYGGRLA 81 (743) T ss_pred cccCCceEEEEecCCCceeccCCcceeEEEEeccCC-CCCcCEEecCHHHHHHHcCCccCCcchHHHHHHHHHhCCceEE Confidence 12 5779999987665444333 35889888753 557788776 4566 45564 33222 234467999999 Q ss_pred EEccCCcccccceeEEEEecceeeehhhheeeeeeeecccC-----------CC-cccceeEEEEEcc-CCCeeEEEeee Q lcl|Aclame:pro 69 VIRPRGETQSLNAAFVVVGGYNVTLGAFNVFYLMFLGYDPQ-----------KG-YTDVSYVDVQLAG-TPTDTILFSYS 135 (742) Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~-~~~~~~~~~~~~~-~~~~~~~~~~~ 135 (742) |+|--+++. .++.-. +-.+.+.. -..||.. +| .++- +.|++.. ++.....+... T Consensus 82 vvrv~~~~~-~~a~~~---~~~~~~~~-------~~~~~~~~~~~~~~~a~~~G~~gN~--i~V~v~~~~~d~~~~~~~~ 148 (743) T protein:vir:10 82 VVRAETTGV-LNATTG---SAGVLVKN-------RESWDAGSGNGEVFVARTAGSWGNS--LMGVLVDRGADYIVTFAAT 148 (743) T ss_pred EEEccCccc-cccccc---cccccccc-------cccccccccceeEEEEeeccccccc--eEEEEecCCCcceeeeecc Confidence 999876553 222211 11110000 0011110 11 1121 1222221 11111111110 Q ss_pred cCCCcceeEEEEEeeceeEeecccceeeeeeeccccceEEEEeecCccccEEEEeecCCCcceEeecccCCCccee-eee Q lcl|Aclame:pro 136 LDGSSTTHSLTINLNAPSVTLPSNIVPLFFYYEPYTGSITLQSSVNYSGLTLNYTVSKATTPWVYFAEYGTPTSSL-TLY 214 (742) Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 214 (742) ......-..++.+...-.. .+ .-+.+.-++..+.|+...+.....+.-. ++... ..+ T Consensus 149 ~~~~~~~~~~~~~~~~~~~--~~--~v~~~~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~a~~ 206 (743) T protein:vir:10 149 PTDTAVGTQLLFSYSGTLV--TG--EILSYDSATNTATITASGTLTSQYLLDT------------------PEQGLIGSF 206 (743) T ss_pred ccccccceeeeeccccccc--cc--ceeeeeecCcceeeeeccccceeeeccc------------------ccccccccc Confidence 0000000001110000000 00 0011111122222221111000000000 00000 000 Q ss_pred ecccccccccCcccceeeEEEeeeeecccCCceeccceeEEEEEeecc--------CCCCCccceeeeeeecCCCCCeee Q lcl|Aclame:pro 215 KGFYLEGIDLNSFNKQFVVSIENITVNREKGQVLYPSFDVVVHFRDIR--------GVSANTEYIRFRQVNLNPESPNYI 286 (742) Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~ 286 (742) .+ .......+.++..++.+.+...+-..-. +.-.++... .+.-++...+.- T Consensus 207 ~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~tv~v~~~~~~vg~~v~~---~~~~~~~~~~~~ 265 (743) T protein:vir:10 207 TD------------------NSTTEVGRTPGTYSNVPASGGTGTGATFNVVVADAGGGVGGSVVV---TLANPGTGYNQG 265 (743) T ss_pred cc------------------cccccccccccceeeEEeccccccccccccccccccccccccccc---ccccccceeeec Confidence 00 0011111222222222222111110000 000000000 000000000000 Q ss_pred --ecccCceEEEEcCceEEecccccCCcceEEEEeccccccccccchhhhhhhhhhheecccceEEEEEEEEEeeecccc Q lcl|Aclame:pro 287 --ERVIGNMTFEFDGERIVTGGEYPNQVPFLRVVVSQDIKQNVAGVEKWVPVGFEGIYSVGDFTVIVNELTNVSIPVTDS 364 (742) Q Consensus 287 --~~~~~~~~~~~~g~~~vtG~~~~n~~p~L~~si~~~~~~~~ag~s~~ip~al~aI~avg~~tv~v~~itnv~~p~tds 364 (742) ..+.+..+-.........+ ..+++ .+...-..+...+.. ..+.+... +. +.....+.. .+.... T Consensus 266 ~~~~v~~~~~~~~t~~~~~~~--~~~~g-~~~~~a~~~~~~~~~-------~~~~~~~~-~~--~~~~~~t~~-~~~~~~ 331 (743) T protein:vir:10 266 ETLTIASAATGDGTDILVTVA--TLSDG-TIAITELKDWYLNTE-------IGSTGIKL-GD--IGPRPGTSQ-FATDNG 331 (743) T ss_pred cccccccccccccccchhhee--ccccc-ceeeeecccccccch-------hhcccccc-cc--ccccceeee-cccccc Confidence 0000000000000000000 00000 000000000000000 00000000 00 000000000 000000 Q ss_pred ccccchh---hheeeeec---ccccceeeeeecccccccccccccceeeeccCCcceeeeccccc--------ccc-ccc Q lcl|Aclame:pro 365 AIIPPMR---FTRIEQIT---LSGGASFSVISNQPYGFNIQDSRHSYWLSPFKDDELIIGTELVL--------PAL-DVS 429 (742) Q Consensus 365 a~vp~~~---~~li~~~~---l~~ga~~~vl~~~~~~~~i~~s~~~~~Ls~l~d~s~~v~td~~a--------~a~-d~s 429 (742) ....... .+...... ....+.+.++..... .........+....+.+.+..+...... ... ... T Consensus 332 ~~~d~~~v~v~~~~~~~~~~~~~v~~~~~~~s~~~~-~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~ 410 (743) T protein:vir:10 332 ITDDQVHFAVIDTTGELTGTANTIVERLTYLSKLSD-ARSEENANIYYKNVINEQSAYLYHGNDAAVQIAASGEAWGQSS 410 (743) T ss_pred ccccceEEEEecCcceeeeccCceeEEEeeeecccc-cccccCcceeecceeccccceeeccCcccceeeeccccCcccc Confidence 0000000 00000000 000011111111000 0000000011111111111110000000 000 000 Q ss_pred ceeEeecccccccccceeeeccCCcceEEEecCCccccccccccccccccchhhHHHhhccC--CccEEEEcCCCc---- Q lcl|Aclame:pro 430 TEFGVSSWEEALPEFSFLMPFQGGSDGYIRVDENEPDTIGRVKITPALLANYERLLPLLTED--QFDLVLTPYLTF---- 503 (742) Q Consensus 430 ~~v~l~~~~~~~p~a~~av~l~gGtdg~i~vd~~~~~~ig~~~~~~~~~a~rtGL~AL~~~d--~v~LL~aPg~t~---- 503 (742) ..+.+...............+.||.|+. .........++.+|+..+ .++|+++||... T Consensus 411 ~~~~~~~~~~~~~~~~~~~~~~gG~d~~----------------~~~~~~~~~~~~~~~~~~~~~~~ll~~p~~~~~~~~ 474 (743) T protein:vir:10 411 DQVLADAGTAFSRTTGYWVNLAGGNDDF----------------AYDAGEFGAAMDLFLDTEETEIDFVLMGGSMADEAD 474 (743) T ss_pred ceeeeecccccccccceEEEeecCcccc----------------ccchhHHHHHHHHhhhccccCcceEEecCcccCccc Confidence 0000111111111111111222222211 011112234566665543 468999999753 Q ss_pred -hHHHHHHHHHHHhhcCceEEEEECCCCC--------------ChHHHHHHHHhccCCcEEEEEecceeeccc--cceeE Q lcl|Aclame:pro 504 -ADHAGTVNAFINRAENRFLYLFDIAGDD--------------DTENLAISLAGYINSSFATTFFPWVRRLTN--KGMRT 566 (742) Q Consensus 504 -s~v~aal~Al~a~a~~R~~aI~D~p~~~--------------~t~~~A~a~r~~~~S~~aaL~~PwVkv~d~--~~~~~ 566 (742) ..++.++.++|+.+++ +++++|+|.+. +..+.+..+++.++|+|+++||||+++.|+ +..++ T Consensus 475 ~~~v~~a~~~~~~~~~~-~~a~~d~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~p~~~~~d~~~~~~~~ 553 (743) T protein:vir:10 475 TKSKATKVIAIAASRKD-ALAFVSPHKGNQIASTGNVALSSAQQKENTIAFFSDLTSTSYAVFDSGYKYVYDRFTDKYRY 553 (743) T ss_pred hHHHHHHHHHHHHhhCC-eEEEEecCCCccccccccccccccccchHHHHHHHhccCCeeEEEEccceeeeccccCceeE Confidence 3345556666665443 56677877532 233445556667889999999999998875 55688 Q ss_pred echHHHHHHHHhhhccCceeecCCceeeEeee-------ccccchhHHhhhcCCceEEEEc-CCCEEEEcceecCCCccc Q lcl|Aclame:pro 567 VPASLAAYRSIRTTDPETGLAPVGARRGVVTG-------EPVRQVDWEDLYNNRINPIVRV-GNDVLLFGQKTMLNVNSA 638 (742) Q Consensus 567 vPpSgavAGl~ArtD~e~Gv~~SPaN~~I~~~-------~~ls~sE~d~LN~~GINtI~~f-g~G~rlWGnRTlas~D~~ 638 (742) +|||+++||++||+|.++|+|+||+|+.+.+. ..+++.|++.||++|||||++| ++|+++||+||++++|++ T Consensus 554 ~p~s~~~AGl~a~~D~~~g~~~span~~~~gi~g~~~~~~~~~~~~~~~Ln~~gIn~i~~~~~~G~~~wG~rT~~s~d~~ 633 (743) T protein:vir:10 554 IPCNGDVAGLCVQTSNQLDDWYSPAGLNRGGILNAVKLAYNPNKADRDELYQNRINPVVSLRGQGITLFGDKTALAAPSA 633 (743) T ss_pred echhHHHHHHHHHhhccCCcEEccCCeeeeeeeccccceecCChhHHHhHhhCCceEEEEecCCeEEEEcccccCCCCcc Confidence 99999999999999999999999999865432 2467889999999999999997 679999999999888999 Q ss_pred cceeehhhhhHHHHHHHHHHHHHhhcccCCHHHHHHHHHHHHHHHHHHHhCCceeeEEEEEcCC-CCHHHhhCCEEEEEE Q lcl|Aclame:pro 639 LNRINVRRLLIVMRNRISQILSSYLFENNTSENRLRAEALVRQYLESLRLRGAVTDYEVAIDSV-TTPTDIDNNTLRARV 717 (742) Q Consensus 639 wrfInVRR~~d~Ie~sI~~a~~~~VfEPNd~~l~~~V~~sInafL~~L~~~GAL~Gf~V~~Det-Ntp~dI~~GrL~i~I 717 (742) |+||++||||+||+++|++.++|+||||||+.+|++|+++|++||++||++|+|.||+|+||++ |++++|++|+|+++| T Consensus 634 ~~~i~vrR~~~~i~~si~~~~~~~v~e~n~~~~~~~i~~~i~~fL~~l~~~gal~~~~V~~d~~~nt~~~i~~G~~~~~i 713 (743) T protein:vir:10 634 FDRINVRRLFLNLEKRARRLAEGVLFEQNDATTRAGFSSALNSYLSEVQARRGVTDYLVICDESNNTPDIIDRNEFVAEV 713 (743) T ss_pred cceEeehhhHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhcCceeeeEEEEcCCCCCHHHhhCCeEEEEE Confidence 9999999999999999999999999999999999999999999999999999999999999955 888999999999999 Q ss_pred EEEecCCceEEEEEEEEeeceeecC Q lcl|Aclame:pro 718 TVQPARSIEYIDITFVITPTGVEIT 742 (742) Q Consensus 718 ~vaP~~PAEfI~l~f~it~tG~~fs 742 (742) +++|++|||||+|||.++++|++|+ T Consensus 714 ~~~p~~pae~I~~~~~~~~~~~~~~ 738 (743) T protein:vir:10 714 YVKPTRSINFITITFTATKTGVTFS 738 (743) T ss_pred EEEecCCcceEEEEEEEeecCcchH Confidence 9999999999999999999999999 No 5 >protein:vir:98263 Length: 664 # NCBI annotation: gp18 tail sheath monomer # Family: family:all:661 # MgeID: mge:1667 # MgeName: RB43 # Cross-refs: genbank:acc:YP_239196;genbank:gi:66391671;genbank:GeneID:3416365 Probab=100.00 E-value=6.5e-77 Score=438.26 Aligned_cols=584 Identities=20% Similarity=0.191 Sum_probs=310.7 Q ss_pred CeeeeeeeeeeEeccccCCc-hhhheeeeecCCCCcccceeec-hhHHhhc-ccc-ee-----eeehhhhcCcceEEEEc Q lcl|Aclame:pro 1 MYRVNVKEVDLSITPEVGTP-VQTALVGAFDLPIPSELPVSVT-PDEFRRV-GST-EL-----SLIADSLVGGQEVTVIR 71 (742) Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~-~~-----~~~~~~~~~~~~~~~~~ 71 (742) -=-|-|+|+|++ .|-.|-+ -..++||-|.-= |-..|+-+| ..||+|. |.- +. ...+.-+-||...-|+| T Consensus 5 ~PgVyv~E~~~~-~~i~~~~ts~~~~vG~~~~G-p~~~p~~i~s~~d~~~~fG~~~~~~~~~~~v~~~f~ngg~~~~vvR 82 (664) T protein:vir:98 5 SPGIETKETSVQ-STVVRNSTGRAAIVGKFSWG-PAYQIRQISNEVELVNYFGAPDNLTADYFMSAVNFLQYGNDLRLVR 82 (664) T ss_pred cCceEEEecCCC-cccccccccceEEEeeccCC-CCCccEEecCHHHHHHhcCCccccchhHHHHHHHHHhcCCeEEEEE Confidence 224678999876 3433333 246788888763 556787776 5667654 532 11 12233477999999999 Q ss_pred cCCcccccceeEEEEecceeeehhhheeeeeeeecccCCCcccceeEEEEEccCCCeeE-EE-eeecCCCcceeEEEEEe Q lcl|Aclame:pro 72 PRGETQSLNAAFVVVGGYNVTLGAFNVFYLMFLGYDPQKGYTDVSYVDVQLAGTPTDTI-LF-SYSLDGSSTTHSLTINL 149 (742) Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~ 149 (742) --+++..-|+.-. .++-.++.- --|.+. .-++ ++++.++..... -+ .-..++++....++|=. T Consensus 83 v~~~~~~~~a~~~-~~~~~~~~~--------~~~~~~--~~g~----~~~~~~~~~~~~~~~~~~~~~~~gn~~~v~i~~ 147 (664) T protein:vir:98 83 VVDKDAAKNASAI-FNQIKTTIA--------SQGSNY--NVGD----VIKVKYSNTVVEENGKVTQVDSNGKILAVTIPK 147 (664) T ss_pred ecCcccccccccc-ccccceeec--------cCCccc--cccc----ceeEeecCcccccceeeccCCCCCceeeEeecc Confidence 8777766665311 111111110 000000 1122 333322221110 01 11123333222222210 Q ss_pred eceeEeecccceeeeeeeccccceEEEEee-----------cCccccEEEE-----eecCCCcceEeecccCCCcceeee Q lcl|Aclame:pro 150 NAPSVTLPSNIVPLFFYYEPYTGSITLQSS-----------VNYSGLTLNY-----TVSKATTPWVYFAEYGTPTSSLTL 213 (742) Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~ 213 (742) ..........-....-.-...++++..++. ..+.++.+.- .......+...-.+++.|..+ .. T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~s~g~a~a~~v~~v~~d~~~~~~~~~~a~~~i~~~~~~~~~~~~~~~~~~-a~ 226 (664) T protein:vir:98 148 RKKSLLVLNRSVLTQIFLLVGTTEIVSQSSGVSASITIDGIESDSGITLLNLDIAKETIQGTSFQTLTQKYQIPSVV-AL 226 (664) T ss_pred Cccceeecccccccccceecccceeeeeecccceeeecccccccceeeccccceeeeccccccceeeeeccccceee-ee Confidence 000000000000000001112233322221 1111111100 000011111111222222221 12 Q ss_pred eecccccccccCcccceeeEEEeeeeecccCCceeccceeEEEEEeeccCCCCCccceeeeeeecCCCCCeeeecccCce Q lcl|Aclame:pro 214 YKGFYLEGIDLNSFNKQFVVSIENITVNREKGQVLYPSFDVVVHFRDIRGVSANTEYIRFRQVNLNPESPNYIERVIGNM 293 (742) Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (742) +.|-+-..+.+.-.++.-...-.-+.+....++..-.+.. .+...+...+... +-.... -.++|.+. + T Consensus 227 ~~G~~Gn~isv~i~s~~~~~~~~~i~~~~~~~~~~~~~~~------~~~~~~~~~~~~~---~~~~~~-~~~~e~~~--~ 294 (664) T protein:vir:98 227 YPGELGSTVQVEIISKAAYDTGAMISGYPSGISVKNSGRS------VMTYGPQTDNQYA---FVVRRG-GIVQESFI--V 294 (664) T ss_pred ecccccceeeeeecccccccCcceEeeccCceecccceee------eeeccccCcccee---EEEecC-CceeeeEE--e Confidence 3332222222111111000000000000000000000000 0001111112110 000000 01112211 1 Q ss_pred EEEEcCceEEecccccCCcceEEEEeccccccccccchhhhhhhhhhheecccceEEEEEEEEEeeeccccccccchhhh Q lcl|Aclame:pro 294 TFEFDGERIVTGGEYPNQVPFLRVVVSQDIKQNVAGVEKWVPVGFEGIYSVGDFTVIVNELTNVSIPVTDSAIIPPMRFT 373 (742) Q Consensus 294 ~~~~~g~~~vtG~~~~n~~p~L~~si~~~~~~~~ag~s~~ip~al~aI~avg~~tv~v~~itnv~~p~tdsa~vp~~~~~ 373 (742) ....+++. .+|+ + ....+..+ .+..... . ..+... +. T Consensus 295 ~~~~~~~~-~~~~--------~-----------~~~~~~~~---------~~~~~~~----~--~~~~~~----~~---- 331 (664) T protein:vir:98 295 STDKTDKD-IYGV--------N-----------IYMDDFFA---------NGGSQYV----F--GTSMNW----PK---- 331 (664) T ss_pred ecccCccc-ceee--------e-----------eechhhee---------cccceee----e--eecccC----Cc---- Confidence 11111110 0010 0 00000000 0000000 0 000000 00 Q ss_pred eeeeecccccceeeeeecccccccccccccceeeeccCCcceeeecccccccccccceeEeecccccccccceeeeccCC Q lcl|Aclame:pro 374 RIEQITLSGGASFSVISNQPYGFNIQDSRHSYWLSPFKDDELIIGTELVLPALDVSTEFGVSSWEEALPEFSFLMPFQGG 453 (742) Q Consensus 374 li~~~~l~~ga~~~vl~~~~~~~~i~~s~~~~~Ls~l~d~s~~v~td~~a~a~d~s~~v~l~~~~~~~p~a~~av~l~gG 453 (742) .. .....+.+| T Consensus 332 -----------------------------------------------------~~----------------~~~~~~~gg 342 (664) T protein:vir:98 332 -----------------------------------------------------GF----------------SGILEFGGG 342 (664) T ss_pred -----------------------------------------------------cc----------------ceeEeccCc Confidence 00 000001111 Q ss_pred cceEEEecCCccccccccccccccccchhhHHHhhccC--CccEEEEcCCCch------HHHHHHHHHHHhhcCceEEEE Q lcl|Aclame:pro 454 SDGYIRVDENEPDTIGRVKITPALLANYERLLPLLTED--QFDLVLTPYLTFA------DHAGTVNAFINRAENRFLYLF 525 (742) Q Consensus 454 tdg~i~vd~~~~~~ig~~~~~~~~~a~rtGL~AL~~~d--~v~LL~aPg~t~s------~v~aal~Al~a~a~~R~~aI~ 525 (742) .+.. +.+ +..+.++|+++|+..+ .++||++|+++.. .++.++.++|+.+++++ +++ T Consensus 343 ~~~~--------~~~-------g~~~~~tgl~~l~~~~~~~~~ll~~p~~~~~~~~~~~~v~~al~~~a~~~~~~~-a~~ 406 (664) T protein:vir:98 343 LSSN--------DTV-------GADELMTGWDMFADREALHVPLLIAGGCAGESVEIASTVQKHVISIGDERQDCT-VFV 406 (664) T ss_pred cccc--------ccc-------CchhHHHHHHhhhcccccccceEEecCCCCCcHHHHHHHHHHHHHHHHhcCCeE-EEE Confidence 1110 000 1124678999998765 3689999998753 35666777777765554 455 Q ss_pred ECCC-------CCChHHHHHHHHh--------------ccCCcEEEEEecceeeccc--cceeEechHHHHHHHHhhhcc Q lcl|Aclame:pro 526 DIAG-------DDDTENLAISLAG--------------YINSSFATTFFPWVRRLTN--KGMRTVPASLAAYRSIRTTDP 582 (742) Q Consensus 526 D~p~-------~~~t~~~A~a~r~--------------~~~S~~aaL~~PwVkv~d~--~~~~~vPpSgavAGl~ArtD~ 582 (742) |+|. ..++.+.+.+|++ +++|+|+++||||+++.|+ +..+++||||++||++||+|. T Consensus 407 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~p~~~~~d~~~~~~~~~p~sg~~AGl~A~~D~ 486 (664) T protein:vir:98 407 SPPRSLLVNIPLATAVDNIVEWRTGYKISGGTPVDNNLNVSSSYGFLDGNYKYQYDKYNDVNRWVPLAGDIAGLCVYTDS 486 (664) T ss_pred ccccceeccCCccccHHHHHHHhhhccccccchhhhhcCCccceEEEEcCeEEEecccCCceEEechHHHHHHHHHHhhh Confidence 5442 1234556667665 5789999999999999875 556889999999999999999 Q ss_pred CceeecCCceeeEe---ee----ccccchhHHhhhcCCceEEEEc-C-CCEEEEcceecCCCccccceeehhhhhHHHHH Q lcl|Aclame:pro 583 ETGLAPVGARRGVV---TG----EPVRQVDWEDLYNNRINPIVRV-G-NDVLLFGQKTMLNVNSALNRINVRRLLIVMRN 653 (742) Q Consensus 583 e~Gv~~SPaN~~I~---~~----~~ls~sE~d~LN~~GINtI~~f-g-~G~rlWGnRTlas~D~~wrfInVRR~~d~Ie~ 653 (742) ++|+|+||+|+.+. +. ..+++.|++.||++|||||++| + +|+++||+||+++++++|+|||+||||+||++ T Consensus 487 ~~g~~~span~~~~~i~g~~~~~~~~~~~~~~~Ln~~gIn~i~~~~~~~G~~~wG~rT~~~~~s~~~~i~vrR~~~~i~~ 566 (664) T protein:vir:98 487 VANPWMSPAGYNRGQIRNCIKLAIEPRTAHRDAMYQVQINPVTGFAGGSGFVLYGDKTLTSVPSPFDRINVRRLFNMIKK 566 (664) T ss_pred cCCcEECcCCceeeeeeccccceeecChhhHHHHHhCCCeEEEEeeCCCcEEEEcccccCCCCcccceEeehhHHHHHHH Confidence 99999999998543 22 3467889999999999999997 4 69999999999777789999999999999999 Q ss_pred HHHHHHHHhhcccCCHHHHHHHHHHHHHHHHHHHhCCceeeEEEEEcCC-CCHHHhhCCEEEEEEEEEecCCceEEEEEE Q lcl|Aclame:pro 654 RISQILSSYLFENNTSENRLRAEALVRQYLESLRLRGAVTDYEVAIDSV-TTPTDIDNNTLRARVTVQPARSIEYIDITF 732 (742) Q Consensus 654 sI~~a~~~~VfEPNd~~l~~~V~~sInafL~~L~~~GAL~Gf~V~~Det-Ntp~dI~~GrL~i~I~vaP~~PAEfI~l~f 732 (742) +|++.++|+||||||+.+|++|+++|++||++||++|+|.||+|+||++ |+++||++|+|+++|+++|++|||||+|+| T Consensus 567 si~~~~~~~v~epn~~~l~~~i~~~i~~~L~~l~~~gal~g~~V~~d~~~nt~~~i~~G~~~~~i~~~p~~pae~I~~~~ 646 (664) T protein:vir:98 567 DIGDNAKYKLFENNDDFTRASFRMDTGQYMTNIRALGGCYDYRVICDTTNNTPDVIDRNEFVATVYVKPPRSINYITLNF 646 (664) T ss_pred HHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCceeeeEEEEcCCCCCHHHhhCCeEEEEEEEEecCCcceEEEEE Confidence 9999999999999999999999999999999999999999999999965 788999999999999999999999999999 Q ss_pred EEeeceeecC Q lcl|Aclame:pro 733 VITPTGVEIT 742 (742) Q Consensus 733 ~it~tG~~fs 742 (742) .++++|++|+ T Consensus 647 ~q~~~~~~~~ 656 (664) T protein:vir:98 647 VATSTGADFD 656 (664) T ss_pred EEeecCcchh Confidence 9999999999 No 6 >protein:vir:108052 Length: 660 # NCBI annotation: gp18 tail sheath protein # Family: family:all:661 # MgeID: mge:2002 # MgeName: JS98 # Cross-refs: genbank:acc:YP_001595294;genbank:gi:161622600;genbank:GeneID:5783771 Probab=100.00 E-value=5.4e-77 Score=438.73 Aligned_cols=566 Identities=18% Similarity=0.144 Sum_probs=281.3 Q ss_pred eeceeEeecccceeeeeeeccc-cceEEEEeecCccccEEEEeecCCC-cceE------eecccCCCcceeeeeeccccc Q lcl|Aclame:pro 149 LNAPSVTLPSNIVPLFFYYEPY-TGSITLQSSVNYSGLTLNYTVSKAT-TPWV------YFAEYGTPTSSLTLYKGFYLE 220 (742) Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~------~~~~~~~~~~~~~~~~~~~~~ 220 (742) || ..-||-.++ |-+ +..|.=.++ . -.--+-++-.-|. .|.. |...||-|...- |-.++.. T Consensus 1 ~~---~~~Pgvyv~-----e~~~~~~i~~~~t-~-~~~~vg~~~~gp~~~p~~v~s~~~~~~~fg~~~~~~--~~~~~~~ 68 (660) T protein:vir:10 1 MA---LLSPGIELK-----ETSVQSTVVRNAT-G-RAALVGKFQWGPAFQVTQITNEVELVDLFGGPNNEV--ADYFMSG 68 (660) T ss_pred Cc---eecCceEEE-----eecCCccccCCCc-c-cceEEeecCCCCCccCeEcCCHHHHHHHcCCcCCCc--hhHHHHH Confidence 11 122333222 221 122221111 0 0111122211111 2221 223455554321 2223333 Q ss_pred ccccCcccceeeEEEeeeeecccCCceeccceeEEEEEeeccCCCCCccceeeeeeecCCCCCeeeecccCceEEEEcCc Q lcl|Aclame:pro 221 GIDLNSFNKQFVVSIENITVNREKGQVLYPSFDVVVHFRDIRGVSANTEYIRFRQVNLNPESPNYIERVIGNMTFEFDGE 300 (742) Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 300 (742) ..=||+-++-+|+.+.+.......+.. .-.+......... +.....-|+++-...-..++.....+-++-.. .+. T Consensus 69 ~~f~~~g~~~~vvrv~~~~~~~~~~~~-~~~~~~~~~~~~~--~~~~g~~~~v~~~~~~~~~~~~v~~~~a~g~~--~~~ 143 (660) T protein:vir:10 69 MNFLQYGNDLRTVRVVSREFAKNASPI-AGNIETTITTAGS--NYAVGDKINIKYNQTVVESEGRVTSVDTDGKI--LSV 143 (660) T ss_pred HHHHhCCceEEEEEecccccccccccc-cccceeEEeeccc--cccccceeeEeeccccccccccceeeccccce--eee Confidence 444688888899888655433322221 2233333333321 11223334433222111111111111111000 000 Q ss_pred eEEeccccc-------CCcceEEEEeccccccccccchhhhhhhhhhheecccceEEEEEEEEEeeeccccccccc--hh Q lcl|Aclame:pro 301 RIVTGGEYP-------NQVPFLRVVVSQDIKQNVAGVEKWVPVGFEGIYSVGDFTVIVNELTNVSIPVTDSAIIPP--MR 371 (742) Q Consensus 301 ~~vtG~~~~-------n~~p~L~~si~~~~~~~~ag~s~~ip~al~aI~avg~~tv~v~~itnv~~p~tdsa~vp~--~~ 371 (742) ++ +++.. ++.+.+........... ......+.++..++..+.....+... ............ .. T Consensus 144 ~~--~ta~~~~~a~~v~~~~~~~~~~~~~~~~~--~~~~~~a~sv~~~v~~~~~~~~~~~~---~~~~~~~~~~~~~~~~ 216 (660) T protein:vir:10 144 FI--PSAKIIAYARSLNQYPTLGPAWTAEVTSA--SSGVSGTITVGKIVTDSGILLTEAEN---SEEAITSLEFQAALKK 216 (660) T ss_pred cc--ccccccccccccccccccccceeEEEecc--cCccccceeeeeeeccCcceEEeeec---cccccccccceeeccc Confidence 00 01100 00000000000000000 00000111111111111100000000 000000000000 00 Q ss_pred hhe---eeeecccccceeeeeecccccccccccccceeeeccCCcce-----------eeec-cccccccccc----cee Q lcl|Aclame:pro 372 FTR---IEQITLSGGASFSVISNQPYGFNIQDSRHSYWLSPFKDDEL-----------IIGT-ELVLPALDVS----TEF 432 (742) Q Consensus 372 ~~l---i~~~~l~~ga~~~vl~~~~~~~~i~~s~~~~~Ls~l~d~s~-----------~v~t-d~~a~a~d~s----~~v 432 (742) ... ........+....+.......... .....+........ ...+ +.+......+ ... T Consensus 217 ~~~~~~~a~~~g~~G~~i~v~i~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~ 293 (660) T protein:vir:10 217 FAMPGVVALYPGEIGSTLEVEIVSKAAYEA---GSSKMLDVYPGGGTRASIAKAVFNYGPQTDDQYAIIVRRDGAIVESV 293 (660) T ss_pred cccceeeeecccccCcceeEEEeeccccCC---cceeEEeeeeccceeeEEeeeecccccccccccccccccCCccccee Confidence 000 000000000000000000000000 00000000000000 0000 0000000000 000 Q ss_pred Eeecccccc-cccce---eee-ccCCcceEEEecCCccc-------ccccccccc--ccccchhhHHHhhccC--CccEE Q lcl|Aclame:pro 433 GVSSWEEAL-PEFSF---LMP-FQGGSDGYIRVDENEPD-------TIGRVKITP--ALLANYERLLPLLTED--QFDLV 496 (742) Q Consensus 433 ~l~~~~~~~-p~a~~---av~-l~gGtdg~i~vd~~~~~-------~ig~~~~~~--~~~a~rtGL~AL~~~d--~v~LL 496 (742) .+....... ..... ... ..++...........+. ..+..+... .....++|+.+++..+ .++++ T Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~gg~~~~~~~t~~~~~~~~~~~~~~~~~~~~~l 373 (660) T protein:vir:10 294 VLSTKEGEKDVYGNNIYLDDYFAKGTSNYIYATSLNWPKGFSGIINLSGGISANDKVTAGDLMQGWDLFADREALHINLL 373 (660) T ss_pred eeeccccccccccceeeeehhhcCCCccEEEEEeccCCCCcccceeeeccccCccccccchhhhhhhhhhhhhhcccceE Confidence 000000000 00000 000 01111111111111110 001111000 0112345777766543 57899 Q ss_pred EEcCCCc------hHHHHHHHHHHHhhcCceEEEEECCCC-------CChHHHHHHHHh----------ccCCcEEEEEe Q lcl|Aclame:pro 497 LTPYLTF------ADHAGTVNAFINRAENRFLYLFDIAGD-------DDTENLAISLAG----------YINSSFATTFF 553 (742) Q Consensus 497 ~aPg~t~------s~v~aal~Al~a~a~~R~~aI~D~p~~-------~~t~~~A~a~r~----------~~~S~~aaL~~ 553 (742) ++|++.. ..++.++.++|+.+++ +++++|+|.+ .++.+.+.+|+. +++|+|+++|| T Consensus 374 ~~p~~~~~~~~~~~~v~~al~~~~~~~~~-~~aiid~p~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~s~~~~~~~ 452 (660) T protein:vir:10 374 IAGAVAGEGDEVASTVQKHVVSIADERQD-CLAFISPPKGLLVNVPLTRAVDNLIDWRTGAGTFDANNMNISTTYAAIDG 452 (660) T ss_pred EEcCcCCCchhhhHHHHHHHHHHHHhhCC-EEEEEecCcccccccccccCHHHHHHHHhhcccccccccccCcceEEEEc Confidence 9998753 3466777788887655 4567777743 235567788875 47799999999 Q ss_pred cceeeccc--cceeEechHHHHHHHHhhhccCceeecCCceeeEe---ee----ccccchhHHhhhcCCceEEEEc-C-C Q lcl|Aclame:pro 554 PWVRRLTN--KGMRTVPASLAAYRSIRTTDPETGLAPVGARRGVV---TG----EPVRQVDWEDLYNNRINPIVRV-G-N 622 (742) Q Consensus 554 PwVkv~d~--~~~~~vPpSgavAGl~ArtD~e~Gv~~SPaN~~I~---~~----~~ls~sE~d~LN~~GINtI~~f-g-~ 622 (742) ||+++.|+ +..+++|||+++||++||+|.++|+|+||+|+.+. +. ..+++.|++.||++|||||++| + + T Consensus 453 p~~~~~d~~~~~~~~~p~sg~~AGl~Ar~D~~~g~~~sPan~~~~~i~g~~~~~~~~~~~e~~~Ln~~gIn~i~~~~~~~ 532 (660) T protein:vir:10 453 NYKYQYDKYNDVNRWVPLAADLAGLCARTDDVSQPWMSPAGYNRGQILNVLKLAIEPRQAQRDRMYQEAINPVVGFAGGD 532 (660) T ss_pred CceEEecccCCceeEechhHHHHHHHHHhhccCCcEEccCCeeeceeeccceeeecCChhhHHhHhhCCceEEEEeeCCC Confidence 99999875 45788999999999999999999999999998542 22 3567899999999999999997 4 6 Q ss_pred CEEEEcceecCCCccccceeehhhhhHHHHHHHHHHHHHhhcccCCHHHHHHHHHHHHHHHHHHHhCCceeeEEEEEcCC Q lcl|Aclame:pro 623 DVLLFGQKTMLNVNSALNRINVRRLLIVMRNRISQILSSYLFENNTSENRLRAEALVRQYLESLRLRGAVTDYEVAIDSV 702 (742) Q Consensus 623 G~rlWGnRTlas~D~~wrfInVRR~~d~Ie~sI~~a~~~~VfEPNd~~l~~~V~~sInafL~~L~~~GAL~Gf~V~~Det 702 (742) ||++||+||+++++++|+||||||||+||+++|++.++|+||||||+.||++|+++|++||++||++|+|.||+|+||++ T Consensus 533 G~~~wG~rT~~~~~s~~~~i~vrR~~~~i~~si~~~~~~~v~epn~~~l~~~i~~~i~~fL~~l~~~gal~g~~V~~d~~ 612 (660) T protein:vir:10 533 GFVLFGDKTATKVPSPMDHINVRRLFNMLKKNIGDASKYKLFELNDNFTRSSFRMEVSQYLDGIKALGGIYEGRVVCDTT 612 (660) T ss_pred cEEEEcccccCCCCcccceEehhhHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeEEEEcCC Confidence 99999999997777799999999999999999999999999999999999999999999999999999999999999965 Q ss_pred -CCHHHhhCCEEEEEEEEEecCCceEEEEEEEEeeceeecC Q lcl|Aclame:pro 703 -TTPTDIDNNTLRARVTVQPARSIEYIDITFVITPTGVEIT 742 (742) Q Consensus 703 -Ntp~dI~~GrL~i~I~vaP~~PAEfI~l~f~it~tG~~fs 742 (742) |+++||++|+|+++|+++|++|||||+|+|.++++|++|+ T Consensus 613 ~nt~~di~~G~~~~~i~~~P~~pae~I~~~~~~~~~~~~~~ 653 (660) T protein:vir:10 613 VNTPAVIDRNEFIANIYVKPARSINYITLNFVATSTGADFD 653 (660) T ss_pred CCCHHHhhCCeEEEEEEEEecCCccEEEEEEEEeecCccHH Confidence 7889999999999999999999999999999999999999 No 7 >protein:vir:106427 Length: 679 # NCBI annotation: gp18 tail sheath protein # Family: family:all:661 # MgeID: mge:1474 # MgeName: Aeh1 # Cross-refs: genbank:acc:NP_944106;genbank:gi:38640150;genbank:GeneID:2658188 Probab=100.00 E-value=1.1e-77 Score=442.47 Aligned_cols=558 Identities=20% Similarity=0.196 Sum_probs=283.0 Q ss_pred eeceeEeecccceeeeeeeccccceEEEEeecCc-cccEEEEeecCCC-cceE------eecccCCCcceeeeeeccccc Q lcl|Aclame:pro 149 LNAPSVTLPSNIVPLFFYYEPYTGSITLQSSVNY-SGLTLNYTVSKAT-TPWV------YFAEYGTPTSSLTLYKGFYLE 220 (742) Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~------~~~~~~~~~~~~~~~~~~~~~ 220 (742) |+| .- |=-|-=|-+ |.-.+ +.+.- -.--+-++--.|. .|.. |...||-|+.. -|-.++.. T Consensus 1 ~~~---~~-----Pgvyv~e~~-~~~~i-~~~~t~~~~~vg~~~~gp~~~p~~i~s~~~~~~~fg~~~~~--~~~~~~~~ 68 (679) T protein:vir:10 1 MTL---LS-----PGVETKEIN-LQTTI-ARSSTGRAALVGKFNWGPAYQISQVVSEVDLVDKFGRPDDQ--TADSFFSG 68 (679) T ss_pred Cce---ec-----CceEEEeec-CCccc-ccCccccceeeecccCCCCccCEEecCHHHHHHHcCCcccc--cchHHHHH Confidence 111 11 223332332 33222 11111 1111222211111 2222 22445665542 23334444 Q ss_pred ccccCcccceeeEEEeeeeeccc----CCceec----------cceeEEEEEeeccCCCCCccceeeeeeecCCCCCeee Q lcl|Aclame:pro 221 GIDLNSFNKQFVVSIENITVNRE----KGQVLY----------PSFDVVVHFRDIRGVSANTEYIRFRQVNLNPESPNYI 286 (742) Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (742) +.=||+-.+-+|+.+-+-+-... ++...+ ..-.+-++ -....++..+++.++.....+... T Consensus 69 ~~f~~gg~~~~vvrv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~-----~~~s~~~~~~~~~~~~~~~~~~~~ 143 (679) T protein:vir:10 69 VNFLNYGNDLRLVRVLNETKSRNSSALYQSLSYTITSPGVDYKVGDVVNVL-----QGGNVIATGKVTVVNASGGIVAFY 143 (679) T ss_pred HHHHhCCCeEEEEEccCcccccccccccccccccccccccccccccceeee-----eCCCcccceeEEEeeccCceeeee Confidence 55568888888887632211100 011100 00011111 112233444455544433221110 Q ss_pred ---------ecccCceEEEEcC--ceEEecccccCCcceEEEEec---cccc----------cccccchhh--------h Q lcl|Aclame:pro 287 ---------ERVIGNMTFEFDG--ERIVTGGEYPNQVPFLRVVVS---QDIK----------QNVAGVEKW--------V 334 (742) Q Consensus 287 ---------~~~~~~~~~~~~g--~~~vtG~~~~n~~p~L~~si~---~~~~----------~~~ag~s~~--------i 334 (742) ....+......+. .++..++..... .....+. .+.+ ......... . T Consensus 144 v~~~~~~~~a~~~~~~~~l~~a~~~~~~~~t~~~g~--~~~~~v~~v~~~~~~~~~~~~~a~~~i~~~~~~~~t~~~~~~ 221 (679) T protein:vir:10 144 VPTAAIIDKAKSLNDYPALDNAWQIQFAAGGPGAGQ--AATATVVGINLDSTIFVPNDEYAMSAISERSETKRTFIDICE 221 (679) T ss_pred ecccccccccccccccceecccceeeeeeccccccc--eeeeeeeeeccCCceeeccccccccccccccccchhhhhhhh Confidence 0111111111110 011111111100 0000000 0000 000000000 0 Q ss_pred hhhhhhheec--ccc-eEEEEEEEEEeeeccccccccchhhhe--eeeeccccccee-ee--eeccccccccc------- Q lcl|Aclame:pro 335 PVGFEGIYSV--GDF-TVIVNELTNVSIPVTDSAIIPPMRFTR--IEQITLSGGASF-SV--ISNQPYGFNIQ------- 399 (742) Q Consensus 335 p~al~aI~av--g~~-tv~v~~itnv~~p~tdsa~vp~~~~~l--i~~~~l~~ga~~-~v--l~~~~~~~~i~------- 399 (742) +.....+++. +.+ .... +..+..+.............. ........+... .+ ...-..+.... T Consensus 222 ~~~~~~~~A~~~g~~gn~i~--v~~va~~~~~~~~~~~a~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvv 299 (679) T protein:vir:10 222 EMKVPAIVARYAGTYGDNIK--VLMIAYKDYYKFNEAGKIVSVNTINPKVFPTGLDYGNVTPSSYLEFGPQNESQFAFIV 299 (679) T ss_pred ccccceeeeecccccCCcce--EEEEeecccccccccccccccccccccccccccccccceeeeecccccccccceeeEE Confidence 0000001100 000 0000 011111211111000000000 000000000000 00 00000000000 Q ss_pred ----ccccceeeeccCCcceeeecccccccc---cccceeEeecccccccccceeeeccCCcceEEEecCCccccccccc Q lcl|Aclame:pro 400 ----DSRHSYWLSPFKDDELIIGTELVLPAL---DVSTEFGVSSWEEALPEFSFLMPFQGGSDGYIRVDENEPDTIGRVK 472 (742) Q Consensus 400 ----~s~~~~~Ls~l~d~s~~v~td~~a~a~---d~s~~v~l~~~~~~~p~a~~av~l~gGtdg~i~vd~~~~~~ig~~~ 472 (742) ...+...++...++........+.... ..+..+... .............+.||.++. .. T Consensus 300 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~~~~~~~gg~~~~-------------~~ 365 (679) T protein:vir:10 300 FNNGVAVESKILSTKPGDRDIYGTSIYINEYFGNGYSSFVQGV-AESWPVGYTGVLAFGGGQSSN-------------TD 365 (679) T ss_pred ecccccccceeeecccccccccchhhhhhhhhcCcccceeeec-cccccccccceeeccCCccCC-------------Cc Confidence 000000000000000000000000000 000000000 000000000111122222110 00 Q ss_pred cccccccchhhHHHhhccCCccEEEEcCCCc------hHHHHHHHHHHHhhcCceEEEEECCCC-------CChHHHHHH Q lcl|Aclame:pro 473 ITPALLANYERLLPLLTEDQFDLVLTPYLTF------ADHAGTVNAFINRAENRFLYLFDIAGD-------DDTENLAIS 539 (742) Q Consensus 473 ~~~~~~a~rtGL~AL~~~d~v~LL~aPg~t~------s~v~aal~Al~a~a~~R~~aI~D~p~~-------~~t~~~A~a 539 (742) ..........++.++++...++|+++|+.+. ..++.++..+|+.++++ ++++|+|.. .++.+.+.. T Consensus 366 ~~~~~~~~~~~~~~~~~~~~~~~l~~p~~~~~~~~~~~~v~~~l~~~~~~~~~~-~ai~d~p~~~~~~~~~~~~~~~~~~ 444 (679) T protein:vir:10 366 ISAAEFMKGWDMFADREHTDVNLFIAGAVAGEGAQIASTVQKAVVAIADERRDC-LVLISPPREYMINQPAASVVRKLVD 444 (679) T ss_pred cchhhhhhhhhhhhcccccccceEEecCCCCCchhhhHHHHHHHHHHHHhhCCe-EEEEeccccccccccccchHHHHHH Confidence 0111112234566777777889999999863 45677788888887655 456676643 234456667 Q ss_pred HHh-------------ccCCcEEEEEecceeeccc--cceeEechHHHHHHHHhhhccCceeecCCceeeEe---e---- Q lcl|Aclame:pro 540 LAG-------------YINSSFATTFFPWVRRLTN--KGMRTVPASLAAYRSIRTTDPETGLAPVGARRGVV---T---- 597 (742) Q Consensus 540 ~r~-------------~~~S~~aaL~~PwVkv~d~--~~~~~vPpSgavAGl~ArtD~e~Gv~~SPaN~~I~---~---- 597 (742) |+. +++|+|+++||||+++.|+ +..+++||||++||++||+|.++|+|+||+|+.+. + T Consensus 445 ~r~~~~~~~~~~~~~~~~~s~~~~~~~p~~~~~d~~~~~~~~~p~sg~vAGl~Ar~D~~~g~~~sPan~~~~~i~g~~~~ 524 (679) T protein:vir:10 445 WRRGVNQAGISLDDNMNIGTTYASVDGNYKYQYDKYNDVNRWIPLAADIAGLCARTDTVGQPWQSPAGFNRGQIVNVIKL 524 (679) T ss_pred HHhhcccccchhhhhhccCcceEEEEccceeeecccCCceEEechHHHHHHHHHHhhccCCcEECcCCeeeccccccccc Confidence 765 4679999999999999875 55789999999999999999999999999997542 2 Q ss_pred eccccchhHHhhhcCCceEEEEc-CCCEEEEcceecCCCccccceeehhhhhHHHHHHHHHHHHHhhcccCCHHHHHHHH Q lcl|Aclame:pro 598 GEPVRQVDWEDLYNNRINPIVRV-GNDVLLFGQKTMLNVNSALNRINVRRLLIVMRNRISQILSSYLFENNTSENRLRAE 676 (742) Q Consensus 598 ~~~ls~sE~d~LN~~GINtI~~f-g~G~rlWGnRTlas~D~~wrfInVRR~~d~Ie~sI~~a~~~~VfEPNd~~l~~~V~ 676 (742) ...+++.|++.||++|||||++| ++|+++||+||+++++++|+|||+||||+||+++|+++++|+||||||+.+|++|+ T Consensus 525 ~~~~~~~~~~~Ln~~gin~i~~~~g~G~~~wG~rT~~~~~s~~~~i~vrR~~~~i~~si~~~~~~~v~epn~~~~~~~i~ 604 (679) T protein:vir:10 525 AVDTRQAHRDEMYTNGINPIVGFAGQGYILYGDKTASQAPTPFDRINVRRLFNLLKKSISESAKYKLFELNDAFTRSSFR 604 (679) T ss_pred eeecChhhHHhhhhCCceEEEEecCCeEEEEcccccCCCCcccceEehhhHHHHHHHHHHHHHHHhccCCCCHHHHHHHH Confidence 23467899999999999999998 68999999999977778999999999999999999999999999999999999999 Q ss_pred HHHHHHHHHHHhCCceeeEEEEEcCC-CCHHHhhCCEEEEEEEEEecCCceEEEEEEEEeeceeecC Q lcl|Aclame:pro 677 ALVRQYLESLRLRGAVTDYEVAIDSV-TTPTDIDNNTLRARVTVQPARSIEYIDITFVITPTGVEIT 742 (742) Q Consensus 677 ~sInafL~~L~~~GAL~Gf~V~~Det-Ntp~dI~~GrL~i~I~vaP~~PAEfI~l~f~it~tG~~fs 742 (742) ++|++||++||++|+|.||+|+||++ |++++|++|+|+++|+++|++|||||+|+|.++++|++|+ T Consensus 605 ~~i~~fL~~l~~~gal~gf~v~~d~~~nt~~~i~~G~~~~~i~~~p~~pae~i~~~~~~~~~~~~~~ 671 (679) T protein:vir:10 605 SEVGSYLDTIRSLGGIYDFRVVCDESNNTPAVIDRNEFVATILIKPARSINYITLSFVATSTGADFD 671 (679) T ss_pred HHHHHHHHHHHhCCceeeeEEEEcCCCCCHHHhhCCeEEEEEEEEecCCccEEEEEEEEeecCccHH Confidence 99999999999999999999999955 7889999999999999999999999999999999999999 No 8 >protein:vir:103456 Length: 659 # NCBI annotation: tail sheath monomer # Family: family:all:661 # MgeID: mge:1542 # MgeName: RB32 # Cross-refs: genbank:acc:YP_803108;genbank:gi:116326388;genbank:GeneID:4405485 Probab=100.00 E-value=2.3e-76 Score=435.30 Aligned_cols=560 Identities=19% Similarity=0.175 Sum_probs=272.6 Q ss_pred eeceeEeecccceeeeeeeccccceEEEEeecCccccEEEEeecCCC-cceE------eecccCCCcceeeeeecccccc Q lcl|Aclame:pro 149 LNAPSVTLPSNIVPLFFYYEPYTGSITLQSSVNYSGLTLNYTVSKAT-TPWV------YFAEYGTPTSSLTLYKGFYLEG 221 (742) Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~------~~~~~~~~~~~~~~~~~~~~~~ 221 (742) +|| +-|=-|-=|-..|.-....++.- .--+-++-.-|. .|.. |-..||-|+.. -|-++...+ T Consensus 1 ~~~--------~~PgVyv~e~~~~~~~~~~~ts~-~~fvG~~~~Gp~~~p~~i~s~~d~~~~fG~~~~~--~~~~~~v~~ 69 (659) T protein:vir:10 1 MTL--------LSPGIELKETTVQSTVVNNSTGT-AALAGKFQWGPAFQIKQVTNEVDLVNTFGQPTAE--TADYFMSAM 69 (659) T ss_pred Cce--------ecCceEEEEecCCceecccCccc-eEEEecccCCCCCccEEecCHHHHHHHcCCcCCC--cchhHHHHH Confidence 111 11333333333333111111111 111223222221 3322 22345555431 233334444 Q ss_pred cccCcccceeeEEEeeee------e--c------ccCCceeccceeEEEEEeeccCCCCCccceeeeeeecC-------- Q lcl|Aclame:pro 222 IDLNSFNKQFVVSIENIT------V--N------REKGQVLYPSFDVVVHFRDIRGVSANTEYIRFRQVNLN-------- 279 (742) Q Consensus 222 ~~~~~~~~~~~~~~~~~~------~--~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------- 279 (742) .=+|+-++-+|+.+-.-. . + ..+|..........+++.. +.+.+.-++ ..++-. T Consensus 70 ~f~ngg~~~~vvRv~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~g~~~~v--~~vd~~~~~~~~~i 145 (659) T protein:vir:10 70 NFLQYGNDLRVVRAVDRDTAKNSSPIAGNIEYTISTPGSNYAVGDKITVKYVS--DAIETEGKI--TEVDTDGKIKKINI 145 (659) T ss_pred HHhhCCCeEEEEEccCcccccccccccccceeeEeecccccccccceeeeecC--CCcccccee--eEEecccccceeee Confidence 446777888888652100 0 0 0111111112222333322 222222122 111111 Q ss_pred -CCCCeeeecccCceEE-EEcCc-eEEec-cccc--------CCcceEEEEeccccccccccchh---hhhhhhhhheec Q lcl|Aclame:pro 280 -PESPNYIERVIGNMTF-EFDGE-RIVTG-GEYP--------NQVPFLRVVVSQDIKQNVAGVEK---WVPVGFEGIYSV 344 (742) Q Consensus 280 -~~~~~~~~~~~~~~~~-~~~g~-~~vtG-~~~~--------n~~p~L~~si~~~~~~~~ag~s~---~ip~al~aI~av 344 (742) +..+....+..+.... ..++. ++... +... +......+.............+. ........+.+. T Consensus 146 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~a~t~~~~~~~~~~~~~~~v~a~ 225 (659) T protein:vir:10 146 PTAKIIAKAKEVGEYPTLGSNWTAEISSSSSGLAAVITLGKIITDSGILLAEIENAEAAMTAVDFQANLKKYGIPGVVAL 225 (659) T ss_pred cccccccccccccccceeeeeeeeeeeeeccccceeeEEeeeecCCceeEEeeccccccccccccccceeeccccccccc Confidence 1111111122211111 00000 00000 0000 00000000000000000000000 000000000000 Q ss_pred ccceEEEEEEEEEeeeccccccccchhhheeeeecccccceeeeeecccccccccccccceeeeccCCcceeeecccccc Q lcl|Aclame:pro 345 GDFTVIVNELTNVSIPVTDSAIIPPMRFTRIEQITLSGGASFSVISNQPYGFNIQDSRHSYWLSPFKDDELIIGTELVLP 424 (742) Q Consensus 345 g~~tv~v~~itnv~~p~tdsa~vp~~~~~li~~~~l~~ga~~~vl~~~~~~~~i~~s~~~~~Ls~l~d~s~~v~td~~a~ 424 (742) ..++ ..+.++. ...............+.......................+........ ... T Consensus 226 ~~G~-~g~~~tv----------------~~~~~a~~~~~~~v~v~~~~~~~~~a~~~t~~~~~~~~~~~~~~~~v~-~~~ 287 (659) T protein:vir:10 226 YPGE-LGDKIEI----------------EIVSKADYAKGASALLPIYPGGGTRASTAKAVFGYGPQTDSQYAIIVR-RND 287 (659) T ss_pred ccce-ecccceE----------------EEechhhccccceeeeeeeeecccccccceeeeeeccccccchhhccc-ccc Confidence 0000 0000000 000000000000000000000000000000000000000000000000 000 Q ss_pred cccccceeEeeccccc-cccc--ceeeeccCCcceEEEecCCccc-ccccccccccc-------c-cchhhHHHhhcc-- Q lcl|Aclame:pro 425 ALDVSTEFGVSSWEEA-LPEF--SFLMPFQGGSDGYIRVDENEPD-TIGRVKITPAL-------L-ANYERLLPLLTE-- 490 (742) Q Consensus 425 a~d~s~~v~l~~~~~~-~p~a--~~av~l~gGtdg~i~vd~~~~~-~ig~~~~~~~~-------~-a~rtGL~AL~~~-- 490 (742) .......+....+... .... .......++..-....+...+. ..+.....++. . ....++.++... T Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~gg~~~~~~~~~~~~~~~~~~~~~~~~ 367 (659) T protein:vir:10 288 AIVQSVVLSTKRGEKDIYDSNIYIDDFFAKGGSEYIFATAQNWPEGFSGILTLSGGLSSNAEVTAGDLMEAWDFFADRES 367 (659) T ss_pred ceeeeeeeeccccccccccchhhhhhhhccCcccEEEEeecccCCCccceeeecccccccccccchhHHHHHHHhhhccc Confidence 0000000000000000 0000 0000001111100001111000 00001111110 1 123455555443 Q ss_pred CCccEEEEcCCCc------hHHHHHHHHHHHhhcCceEEEEECCCC-------CChHHHHHHHHh----------ccCCc Q lcl|Aclame:pro 491 DQFDLVLTPYLTF------ADHAGTVNAFINRAENRFLYLFDIAGD-------DDTENLAISLAG----------YINSS 547 (742) Q Consensus 491 d~v~LL~aPg~t~------s~v~aal~Al~a~a~~R~~aI~D~p~~-------~~t~~~A~a~r~----------~~~S~ 547 (742) .+++|+++|++.. ..++.++..+|+.++++ ++++|+|.. .++.+.+.+|++ +++|+ T Consensus 368 ~~~~il~~p~~~~~~~~~~~~v~~al~~~~~~~~~~-~~~~d~p~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~s~ 446 (659) T protein:vir:10 368 VDVQLFIAGSCAGESLETASTVQKHVVSIGDARQDC-LVLCSPPRETVVGIPVTRAVDNLVNWRTAAGSYTDNNFNISST 446 (659) T ss_pred cceeEEEecCCCCcchhhhHHHHHHHHHHHHhhCCe-EEEEcCccccccCCCcccCHHHHHHHHHhcccccccccccCcc Confidence 3578999999864 34566777778776544 456666532 234566788886 37899 Q ss_pred EEEEEecceeeccc--cceeEechHHHHHHHHhhhccCceeecCCceeeEe---ee----ccccchhHHhhhcCCceEEE Q lcl|Aclame:pro 548 FATTFFPWVRRLTN--KGMRTVPASLAAYRSIRTTDPETGLAPVGARRGVV---TG----EPVRQVDWEDLYNNRINPIV 618 (742) Q Consensus 548 ~aaL~~PwVkv~d~--~~~~~vPpSgavAGl~ArtD~e~Gv~~SPaN~~I~---~~----~~ls~sE~d~LN~~GINtI~ 618 (742) |+++||||+++.|+ +..+++|||+++||++||+|.++|+|+||+|+.+. +. ..++++|++.||++|||||+ T Consensus 447 ~~~l~~p~~~~~d~~~~~~~~~p~sg~~AGl~Ar~D~~~g~~~span~~~~~i~g~~~~~~~~~~~~~~~Ln~~gIn~i~ 526 (659) T protein:vir:10 447 YAAIDGNYKYQYDKYNDVNRWVPLAADIAGLCARTDNVSQTWMSPAGYNRGQILNVIKLAIETRQAQRDRLYQEAINPVT 526 (659) T ss_pred eEEEEeCcEEEecccCCceEEechHHHHHHHHHHHhccCCceEccCCceeeeeeccccceecCCHhHHHHHhhCCeeEEE Confidence 99999999999885 55788999999999999999999999999998543 22 34678999999999999999 Q ss_pred Ec-CCCEEEEcceecCCCccccceeehhhhhHHHHHHHHHHHHHhhcccCCHHHHHHHHHHHHHHHHHHHhCCceeeEEE Q lcl|Aclame:pro 619 RV-GNDVLLFGQKTMLNVNSALNRINVRRLLIVMRNRISQILSSYLFENNTSENRLRAEALVRQYLESLRLRGAVTDYEV 697 (742) Q Consensus 619 ~f-g~G~rlWGnRTlas~D~~wrfInVRR~~d~Ie~sI~~a~~~~VfEPNd~~l~~~V~~sInafL~~L~~~GAL~Gf~V 697 (742) +| ++|+++||+||+.+++++|+|||+||||+||+++|++.++|+||||||+.||++|+++|++||++||++|+|+||+| T Consensus 527 ~~~~~G~~~wG~rT~~~~~s~~~~i~vrR~~~~i~~si~~~~~~~v~e~n~~~l~~~i~~~i~~fL~~l~~~gal~~~~V 606 (659) T protein:vir:10 527 GTGGDGYVLYGDKTATSVPSPFDRINVRRLFNMLKTNIGRSSKYRLFELNNAFTRSSFRTETAQYLQGIKALGGIYEYRV 606 (659) T ss_pred EeCCCeEEEEcccccCCCCcccceEehhhHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhcCceeeEEE Confidence 98 57999999999977778999999999999999999999999999999999999999999999999999999999999 Q ss_pred EEcCC-CCHHHhhCCEEEEEEEEEecCCceEEEEEEEEeeceeecC Q lcl|Aclame:pro 698 AIDSV-TTPTDIDNNTLRARVTVQPARSIEYIDITFVITPTGVEIT 742 (742) Q Consensus 698 ~~Det-Ntp~dI~~GrL~i~I~vaP~~PAEfI~l~f~it~tG~~fs 742 (742) +||++ |++++|++|+|+++|+++|++|||||+|+|.++++|++|+ T Consensus 607 ~~d~~~nt~~~i~~G~~~~~i~~~p~~pae~i~~~~~~~~~~~~~~ 652 (659) T protein:vir:10 607 VCDTTNNTPSVIDRNEFVATFYIQPARSINYITLNFVATATGADFD 652 (659) T ss_pred EEcCCCCCHHHhhCCeEEEEEEEEecCCcceEEEEEEEEecCcchH Confidence 99965 7789999999999999999999999999999999999999 No 9 >protein:vir:7206 Length: 659 # NCBI annotation: gp18 tail sheath protein # Family: family:all:661 # MgeID: mge:142 # MgeName: T4 # Cross-refs: genbank:acc:NP_049780;genbank:gi:9632592;genbank:GeneID:1258597 Probab=100.00 E-value=2.1e-76 Score=435.45 Aligned_cols=568 Identities=19% Similarity=0.145 Sum_probs=270.7 Q ss_pred eeceeEeecccceeeeeeeccccceEEEEeecCccccEEEEeecCCC-cceE------eecccCCCcceeeeeecccccc Q lcl|Aclame:pro 149 LNAPSVTLPSNIVPLFFYYEPYTGSITLQSSVNYSGLTLNYTVSKAT-TPWV------YFAEYGTPTSSLTLYKGFYLEG 221 (742) Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~------~~~~~~~~~~~~~~~~~~~~~~ 221 (742) +|| -- |=-|-=|-..|.-....+++- .--+-|+-.-|. .|.. |-..||-|+..- |-.++... T Consensus 1 ~~~---~~-----PgVyvee~~~~~~~~~~~ts~-~~fvG~~~~Gp~~~p~~i~s~~~~~~~fG~~~~~~--~~~~~~~~ 69 (659) T protein:vir:72 1 MTL---LS-----PGIELKETTVQSTVVNNSTGT-AALAGKFQWGPAFQIKQVTNEVDLVNTFGQPTAET--ADYFMSAM 69 (659) T ss_pred Cce---ec-----CceEEEEecCCcccccCCCcc-eEEEeecCCCCCcccEEecCHHHHHHHcCCcCCCC--chhHHHHH Confidence 222 12 333333333333111212211 112233322222 3333 223466554321 22223333 Q ss_pred cccCcccceeeEEEeeee-e-------------cccCCceeccceeEEEEEee-------------ccCCCCCccceeee Q lcl|Aclame:pro 222 IDLNSFNKQFVVSIENIT-V-------------NREKGQVLYPSFDVVVHFRD-------------IRGVSANTEYIRFR 274 (742) Q Consensus 222 ~~~~~~~~~~~~~~~~~~-~-------------~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~ 274 (742) .=||+-.+-+|+.+-+-. . ...+|.....+....+++.. -.+.......-... T Consensus 70 ~f~ngg~~~~vvRv~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~v~~~~~~~~~~~~~v~t~~ 149 (659) T protein:vir:72 70 NFLQYGNDLRVVRAVDRDTAKNSSPIAGNIDYTISTPGSNYAVGDKITVKYVSDDIETEGKITEVDADGKIKKINIPTGK 149 (659) T ss_pred HHHhCCceEEEEEccCCcccccccccccccceeecccccccccceeeeeeeccccccccceEEEeeccccceeeeecccc Confidence 335777778888752100 0 01111111111122222221 00000000000001 Q ss_pred eeecCCCCCeeeecccCceEEEEcCceEEecccccCCcceEEEEeccccccccccchhhhhhhhhhheecccceEEEEEE Q lcl|Aclame:pro 275 QVNLNPESPNYIERVIGNMTFEFDGERIVTGGEYPNQVPFLRVVVSQDIKQNVAGVEKWVPVGFEGIYSVGDFTVIVNEL 354 (742) Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~vtG~~~~n~~p~L~~si~~~~~~~~ag~s~~ip~al~aI~avg~~tv~v~~i 354 (742) ++.+.+...+|-. +...-.. +++.......+. ++..-...............+.+..+.-. . .++..... T Consensus 150 ~~a~~~~~~~~~~-~~~~~~~-----~~~~~~~~~a~~--~~~v~v~~~~~~~~~~v~~~~~a~~~~~~-~-~~v~~~~~ 219 (659) T protein:vir:72 150 NYAKAKEVGEYPT-LGSNWTA-----EISSSSSGLAAV--ITLGKIITDSGILLAEIENAEAAMTAVDF-Q-ANLKKYGI 219 (659) T ss_pred ccccccccccccc-cccceee-----EEeeccccccce--EEEEEeecCcceeeeeccccchhhhcccc-c-cccccccc Confidence 1111122111100 0000000 000000000010 00000000000000000000000000000 0 00000000 Q ss_pred --EEEeeeccccccccchhhheeeeecccccceeeeeecccccccccccccceeeeccCCcceeeeccccccccccccee Q lcl|Aclame:pro 355 --TNVSIPVTDSAIIPPMRFTRIEQITLSGGASFSVISNQPYGFNIQDSRHSYWLSPFKDDELIIGTELVLPALDVSTEF 432 (742) Q Consensus 355 --tnv~~p~tdsa~vp~~~~~li~~~~l~~ga~~~vl~~~~~~~~i~~s~~~~~Ls~l~d~s~~v~td~~a~a~d~s~~v 432 (742) .....+.+.... ..................+......+................+......... .........+ T Consensus 220 ~~~~a~~~gt~g~~---~tv~i~~~~~~~~~~~~~v~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 295 (659) T protein:vir:72 220 PGVVALYPGELGDK---IEIEIVSKADYAKGASALLPIYPGGGTRASTAKAVFGYGPQTDSQYAIIVRR-NDAIVQSVVL 295 (659) T ss_pred ceeeeccccccccc---eeEEEccccccccceeeeeecccccccccccceeeeeeecccccccceeeec-ccceeeeeee Confidence 000000000000 0000000000000000000000000000000000000000000000000000 0000000000 Q ss_pred Eeecccccc-ccc-ceeeeccCCcceEEEe-cCCcc-ccccccccccc-------c-ccchhhHHHhhcc--CCccEEEE Q lcl|Aclame:pro 433 GVSSWEEAL-PEF-SFLMPFQGGSDGYIRV-DENEP-DTIGRVKITPA-------L-LANYERLLPLLTE--DQFDLVLT 498 (742) Q Consensus 433 ~l~~~~~~~-p~a-~~av~l~gGtdg~i~v-d~~~~-~~ig~~~~~~~-------~-~a~rtGL~AL~~~--d~v~LL~a 498 (742) ....+.... ... .....+..+...++.. ....+ ...+.....++ . ....+++.++... .+++|+++ T Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 375 (659) T protein:vir:72 296 STKRGEKDIYDSNIYIDDFFAKGGSEYIFATAQNWPEGFSGILTLSGGLSSNAEVTAGDLMEAWDFFADRESVDVQLFIA 375 (659) T ss_pred eeccccccccchhhhhhhhhhcCCceEEEEEecccCCcccccccccccccccccccchhHHHHHHHhhhccccceeEEEe Confidence 000000000 000 0000000010111110 10000 00000000000 0 1123466666543 35789999 Q ss_pred cCCCc------hHHHHHHHHHHHhhcCceEEEEECCCC-------CChHHHHHHHHhc----------cCCcEEEEEecc Q lcl|Aclame:pro 499 PYLTF------ADHAGTVNAFINRAENRFLYLFDIAGD-------DDTENLAISLAGY----------INSSFATTFFPW 555 (742) Q Consensus 499 Pg~t~------s~v~aal~Al~a~a~~R~~aI~D~p~~-------~~t~~~A~a~r~~----------~~S~~aaL~~Pw 555 (742) |++.. ..++.++.++|+.++++ ++++|+|.. .++.+.+.+||+. ++|+|+++|||| T Consensus 376 p~~~~~~~~~~~~v~~~l~~~~~~~~~~-~~~~d~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~s~~~~~~~p~ 454 (659) T protein:vir:72 376 GSCAGESLETASTVQKHVVSIGDARQDC-LVLCSPPRETVVGIPVTRAVDNLVNWRTAAGSYTDNNFNISSTYAAIDGNH 454 (659) T ss_pred cCCCCcchhhhHHHHHHHHHHHhhhCCE-EEEEcCccccccCCCcccCHHHHHHHHhhccccccccccccceeEEEEcCc Confidence 99864 34566777888776554 456666532 2345667788764 679999999999 Q ss_pred eeeccc--cceeEechHHHHHHHHhhhccCceeecCCceeeEe---e----eccccchhHHhhhcCCceEEEEc-CCCEE Q lcl|Aclame:pro 556 VRRLTN--KGMRTVPASLAAYRSIRTTDPETGLAPVGARRGVV---T----GEPVRQVDWEDLYNNRINPIVRV-GNDVL 625 (742) Q Consensus 556 Vkv~d~--~~~~~vPpSgavAGl~ArtD~e~Gv~~SPaN~~I~---~----~~~ls~sE~d~LN~~GINtI~~f-g~G~r 625 (742) +++.|+ +..+++||||++||++||+|.++|+|+||+|+.+. + ...+++.|++.||++|||||++| ++|++ T Consensus 455 ~~~~d~~~~~~~~~p~sg~vAGl~Ar~D~~~G~~~span~~~~~i~g~~~~~~~~~~~~~~~Ln~~gIn~i~~~~g~G~~ 534 (659) T protein:vir:72 455 KYQYDKYNDVNRWVPLAADIAGLCARTDNVSQTWMSPAGYNRGQILNVIKLAIETRQAQRDRLYQEAINPVTGTGGDGYV 534 (659) T ss_pred eeeccccCCceEEechHHHHHHHHHHhhccCCcEEccCCeeeceeeccccccccCChhHHHHHhhCCceEEEEecCCeEE Confidence 999875 45788999999999999999999999999998542 2 23467899999999999999998 68999 Q ss_pred EEcceecCCCccccceeehhhhhHHHHHHHHHHHHHhhcccCCHHHHHHHHHHHHHHHHHHHhCCceeeEEEEEcCC-CC Q lcl|Aclame:pro 626 LFGQKTMLNVNSALNRINVRRLLIVMRNRISQILSSYLFENNTSENRLRAEALVRQYLESLRLRGAVTDYEVAIDSV-TT 704 (742) Q Consensus 626 lWGnRTlas~D~~wrfInVRR~~d~Ie~sI~~a~~~~VfEPNd~~l~~~V~~sInafL~~L~~~GAL~Gf~V~~Det-Nt 704 (742) +||+||+++++++|+||||||||+||+++|+++++|+||||||+.+|++|+++|++||++||++|+|.||+|+||++ |+ T Consensus 535 ~wG~rT~~~~~s~~~~i~vrR~~~~i~~si~~~~~~~v~e~n~~~l~~~i~~~i~~fL~~l~~~gal~~~~V~~d~~~nt 614 (659) T protein:vir:72 535 LYGDKTATSVPSPFDRINVRRLFNMLKTNIGRSSKYRLFELNNAFTRSSFRTETAQYLQGNKALGGIYEYRVVCDTTNNT 614 (659) T ss_pred EEcccccCCCCcccceEeehhHHHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCceeeEEEEEcCCCCC Confidence 99999997777799999999999999999999999999999999999999999999999999999999999999955 77 Q ss_pred HHHhhCCEEEEEEEEEecCCceEEEEEEEEeeceeecC Q lcl|Aclame:pro 705 PTDIDNNTLRARVTVQPARSIEYIDITFVITPTGVEIT 742 (742) Q Consensus 705 p~dI~~GrL~i~I~vaP~~PAEfI~l~f~it~tG~~fs 742 (742) ++||++|+|+++|+|+|++|||||+|+|.++++|++|+ T Consensus 615 ~~~i~~G~~~~~i~~~p~~pae~I~~~~~~~~~~~~~~ 652 (659) T protein:vir:72 615 PSVIDRNEFVATFYIQPARSINYITLNFVATATGADFD 652 (659) T ss_pred HHHhhCCeEEEEEEEEecCCccEEEEEEEEeecCcchH Confidence 89999999999999999999999999999999999999 No 10 >protein:vir:5663 Length: 671 # NCBI annotation: tail sheath protein # Family: family:all:661 # MgeID: mge:119 # MgeName: KVP40 # Cross-refs: genbank:acc:NP_899602;genbank:gi:34419589;genbank:GeneID:2545776 Probab=100.00 E-value=6.7e-76 Score=432.70 Aligned_cols=566 Identities=16% Similarity=0.125 Sum_probs=271.8 Q ss_pred eeceeEeecccceeeeeeeccccceEEEEeecCcc-ccEEEEeecCCC-cceE------eecccCCCcceeeeeeccccc Q lcl|Aclame:pro 149 LNAPSVTLPSNIVPLFFYYEPYTGSITLQSSVNYS-GLTLNYTVSKAT-TPWV------YFAEYGTPTSSLTLYKGFYLE 220 (742) Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~------~~~~~~~~~~~~~~~~~~~~~ 220 (742) ||| .- |=-|-=|-+ |.-.+. .+.-+ .--+-++-.-|. .|.. |...||-|...- |-.++.. T Consensus 1 ~~~---~~-----Pgvyv~e~~-~~~~i~-~v~t~~~~fvG~~~~Gp~~~p~~v~s~~~~~~~fG~~~~~~--~~~~~v~ 68 (671) T protein:vir:56 1 MTL---LS-----PGIENKEIN-LASAIG-RAATGRAAMVGKFEWGPAYSITQVTSESDLVTIFGRPNDYT--AASFMTA 68 (671) T ss_pred Cce---ec-----CceEEEeec-Cccccc-ccCcccceEEecccCCCCccCEEcCCHHHHHHHcCCcCCCc--chhHHHH Confidence 111 12 333333332 322221 11111 111222211121 2222 224466665432 2334555 Q ss_pred ccccCcccceeeEEEeeeeec--------ccCCceeccc----e-eEEEEEe----------------eccCCCCCccce Q lcl|Aclame:pro 221 GIDLNSFNKQFVVSIENITVN--------REKGQVLYPS----F-DVVVHFR----------------DIRGVSANTEYI 271 (742) Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~----~-~~~~~~~----------------~~~~~~~~~~~~ 271 (742) +.=||+-++-||+.+-+-... .-+-+....+ - .+-+..+ .-++......-- T Consensus 69 ~~f~ngg~~~~vvrv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~ 148 (671) T protein:vir:56 69 NNFLKYGNDLRLVRICDATTAQNATPLYNAVEYTIGASNGCVVGDDITITYSGVGALTAKGKVLEVDAGNNNAASKIFLP 148 (671) T ss_pred HHHHhcCCeEEEEEecCccccccchhhccccccccccCcceeeceeeeeecCcccccccCcceeEEeeeccceeeeeecc Confidence 555788888888886332110 0000000000 0 0011111 000111111111 Q ss_pred eeeeeecCCCCCeeeecccCceEEEEcCceEEecccccCCcceEEEEeccccccc-----cc-cchhhhhh-------hh Q lcl|Aclame:pro 272 RFRQVNLNPESPNYIERVIGNMTFEFDGERIVTGGEYPNQVPFLRVVVSQDIKQN-----VA-GVEKWVPV-------GF 338 (742) Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vtG~~~~n~~p~L~~si~~~~~~~-----~a-g~s~~ip~-------al 338 (742) +++.+.+-+..- ..+.+++.+.......+.......+..+...+.-.+..... .. ....+.+. .+ T Consensus 149 ~~~~v~~~~~~~--~~~~~~~~t~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (671) T protein:vir:56 149 SAEIVAAAKSDG--NYPSVGTITLQPTQGDIALTNIEIIDTGSVYFPNIELAFDALTAIETEGGALKYADLIEKQGFPRL 226 (671) T ss_pred ceeEEEeeeccc--cccccccccccccccceeeeeecccccceEEEeccccccccccccccccccccchhhhhccccccc Confidence 111221111100 00111221111111111000000001011100000000000 00 00000000 00 Q ss_pred hhheecccceEEEEEEEEEeeeccccccc-cchhhheeeeecccccceeeeeecccccccccccccceeeeccCCc-cee Q lcl|Aclame:pro 339 EGIYSVGDFTVIVNELTNVSIPVTDSAII-PPMRFTRIEQITLSGGASFSVISNQPYGFNIQDSRHSYWLSPFKDD-ELI 416 (742) Q Consensus 339 ~aI~avg~~tv~v~~itnv~~p~tdsa~v-p~~~~~li~~~~l~~ga~~~vl~~~~~~~~i~~s~~~~~Ls~l~d~-s~~ 416 (742) .+.+....++.....+.... ........ +....+.+.......+.............+. ...+. ..+ T Consensus 227 ~a~~~g~~g~~~~v~v~~~~-~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~ 295 (671) T protein:vir:56 227 SARYVGDFGDAISVEIINYA-DYQTAFAFAAGHTLGDIELPIYPDGGTRSINLSSYFTFGP----------SNSNQYAVI 295 (671) T ss_pred ccccccccCcceEEEEeccc-ccccccccccceeeeeccccccccccccccccceeecccc----------cccccceeE Confidence 00000000000000000000 00000000 0000000000000000000000000000000 00000 000 Q ss_pred eecccccccccccceeEeecccccc--cccceeeec-cCCcceEEEecCCccccc------cccccccccccchhhHHHh Q lcl|Aclame:pro 417 IGTELVLPALDVSTEFGVSSWEEAL--PEFSFLMPF-QGGSDGYIRVDENEPDTI------GRVKITPALLANYERLLPL 487 (742) Q Consensus 417 v~td~~a~a~d~s~~v~l~~~~~~~--p~a~~av~l-~gGtdg~i~vd~~~~~~i------g~~~~~~~~~a~rtGL~AL 487 (742) +... ........+....+.... ......... .++..-........+... +..+...+.....+|++++ T Consensus 296 v~~~---g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gg~d~~~~~~~~~~~~~~~ 372 (671) T protein:vir:56 296 VRVS---GEVEEAFIVSTNPGDKDVNGQSIFIDEYFENSGSAYITAIAEGWKTESGAYNFGGGSDANAGADDWMFGLDML 372 (671) T ss_pred Eeec---CccceeEEEeecccccccchhhhhhhhhhcccCceEEEecCcccCCccccccccCccccccchhHHHHHHHhh Confidence 0000 000000000000000000 000000000 011100011111111111 1111111112234567777 Q ss_pred hccCC--ccEEEEcCCCchH------HHHHHHHHHHhhcCceEEEEECCCC-------CChHHHHHHHHh---------- Q lcl|Aclame:pro 488 LTEDQ--FDLVLTPYLTFAD------HAGTVNAFINRAENRFLYLFDIAGD-------DDTENLAISLAG---------- 542 (742) Q Consensus 488 ~~~d~--v~LL~aPg~t~s~------v~aal~Al~a~a~~R~~aI~D~p~~-------~~t~~~A~a~r~---------- 542 (742) +..+. +.++++|+..... .+.....+|+..+.++++++|+|.. ..+.+.+.+|++ T Consensus 373 ~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 452 (671) T protein:vir:56 373 SDPEVLYTNLVIAGNAAAEEVSIASTVQKYAIDSVGNVRQDCVVFVSPPQSLIVNKQAGTAVANIQGWRTGIDPTNGQAV 452 (671) T ss_pred hhccccceeEEEcCCCCCccchhHHHHHHHHHHHHHhhcCCEEEEEeccccccccccccccHHHHHHHhhhccccchhhh Confidence 65544 4677777654322 2233344555556678888888743 234455666654 Q ss_pred ----ccCCcEEEEEecceeeccc--cceeEechHHHHHHHHhhhccCceeecCCceeeEe---e----eccccchhHHhh Q lcl|Aclame:pro 543 ----YINSSFATTFFPWVRRLTN--KGMRTVPASLAAYRSIRTTDPETGLAPVGARRGVV---T----GEPVRQVDWEDL 609 (742) Q Consensus 543 ----~~~S~~aaL~~PwVkv~d~--~~~~~vPpSgavAGl~ArtD~e~Gv~~SPaN~~I~---~----~~~ls~sE~d~L 609 (742) +++|+|+++||||+++.|+ +..+++|||+++||++||+|.++|+|+||+|+.+. + ...+++.|++.| T Consensus 453 ~~~~~~~s~~~~~~~p~~~~~d~~~~~~~~~p~s~~~AGl~Ar~D~~~g~~~span~~~~~i~g~~~~~~~~~~~~~~~L 532 (671) T protein:vir:56 453 VDNLNVSTTYAVIDGNYKYQYDKYNDRNRWVPLAGDIAGLCAYTDQVSQPWMSPAGFNRGQIKGVNRLAVDLRRAHRDAL 532 (671) T ss_pred hhhccCCcceEEEecCceEEecccCCceeEechHHHHHHHHHHhhccCCcEECcCCceeccccccccceeecChhHHHHH Confidence 5678999999999999875 55689999999999999999999999999997532 2 234678899999 Q ss_pred hcCCceEEEEc-CCCEEEEcceecCCCccccceeehhhhhHHHHHHHHHHHHHhhcccCCHHHHHHHHHHHHHHHHHHHh Q lcl|Aclame:pro 610 YNNRINPIVRV-GNDVLLFGQKTMLNVNSALNRINVRRLLIVMRNRISQILSSYLFENNTSENRLRAEALVRQYLESLRL 688 (742) Q Consensus 610 N~~GINtI~~f-g~G~rlWGnRTlas~D~~wrfInVRR~~d~Ie~sI~~a~~~~VfEPNd~~l~~~V~~sInafL~~L~~ 688 (742) |++|||||++| ++|+++||+||+.++|++|+||++||||+||+++|++.++|+||||||+.||++|+++|++||++||+ T Consensus 533 n~~gIn~i~~~~~~G~~~wG~rT~~~~~~~~~~i~vrR~~~~i~~si~~~~~~~v~epn~~~~~~~i~~~i~~fL~~l~~ 612 (671) T protein:vir:56 533 YQIGINPVVGFAGQGFVLYGDKTATQQASAFDRINVRRLFNLLKKAISDAAKYRLFELNDEFTRSSFKSEIDAYLTNIQD 612 (671) T ss_pred hhCCceEEEEecCCeEEEEcceecCCCCcccceEehhhHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHh Confidence 99999999998 67999999999977778999999999999999999999999999999999999999999999999999 Q ss_pred CCceeeEEEEEcCC-CCHHHhhCCEEEEEEEEEecCCceEEEEEEEEeeceeecC Q lcl|Aclame:pro 689 RGAVTDYEVAIDSV-TTPTDIDNNTLRARVTVQPARSIEYIDITFVITPTGVEIT 742 (742) Q Consensus 689 ~GAL~Gf~V~~Det-Ntp~dI~~GrL~i~I~vaP~~PAEfI~l~f~it~tG~~fs 742 (742) +|+|.||+|+||++ |++++|++|+|+++|+++|++|||||+|+|.++++|++|+ T Consensus 613 ~gal~g~~v~~d~~~nt~~~i~~G~~~~~i~~~p~~Pae~I~~~~~~~~~~~~f~ 667 (671) T protein:vir:56 613 LGGVYDFRVVCDETNNPGSVIDRNEFVASIYVKPAKSINFITLNFVATSTDADFA 667 (671) T ss_pred CCceeeeEEEEcCCCCCHHHhhCCeEEEEEEEEecCCcceEEEEEEEeecCcchh Confidence 99999999999965 7789999999999999999999999999999999999999 No 11 >protein:vir:100539 Length: 663 # NCBI annotation: gp18 tail sheath monomer # Family: family:all:661 # MgeID: mge:1488 # MgeName: 25 # Cross-refs: genbank:acc:YP_656380;genbank:gi:109290131;genbank:GeneID:4156517 Probab=100.00 E-value=6.5e-76 Score=432.80 Aligned_cols=554 Identities=19% Similarity=0.181 Sum_probs=281.2 Q ss_pred eeceeEeecccceeeeeeeccccceEEEEee-cCccccEEEEeecCCC-cceE------eecccCCCcceeeeeeccccc Q lcl|Aclame:pro 149 LNAPSVTLPSNIVPLFFYYEPYTGSITLQSS-VNYSGLTLNYTVSKAT-TPWV------YFAEYGTPTSSLTLYKGFYLE 220 (742) Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~------~~~~~~~~~~~~~~~~~~~~~ 220 (742) ||| .-|| -|-=|-+ |+-..... ++ -.--+-++---|. .|.. |...||-|+.. -|-.|... T Consensus 1 ~~~---~~Pg-----vyv~e~~-~~~~~~~v~t~-~~~fvG~~~~gp~~~p~~i~s~~~~~~~fG~~~~~--~~~~~~v~ 68 (663) T protein:vir:10 1 MAL---LSPG-----IEMKETS-INSTVVRSATG-RAALVGKFAWGPAYEIRQVTNEVELVDMFGSPDNV--TAPYFMSA 68 (663) T ss_pred Ccc---ccCc-----eEEEEec-Ccccccccccc-cceeeeccccCCCCcCEEecCHHHHHHHcCCcccc--cchHHHHH Confidence 111 1222 2222221 22222111 11 1112223321111 2322 22345666543 23455556 Q ss_pred ccccCcccceeeEEEeeeeecccCCceeccceeEEEEEeeccCCCCCccceeeeeeecCCCCCeeeecccCceEEEEcCc Q lcl|Aclame:pro 221 GIDLNSFNKQFVVSIENITVNREKGQVLYPSFDVVVHFRDIRGVSANTEYIRFRQVNLNPESPNYIERVIGNMTFEFDGE 300 (742) Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 300 (742) +-=||+-++-+||.+-+-.-... ..-++.+.+.-++.. .++++.-. .+.+.+..+..... -.-..+.-+|. T Consensus 69 ~~f~ngg~~~~vvRv~~~~~~~~-~~~~~~~~~~~~~~~----~~~~~~g~---~~~v~~~~~~~~~~-~~~~~~~~~g~ 139 (663) T protein:vir:10 69 MNFLQYGNDLRLVRVIDMEQAKN-ASPLFNQIEVTITTE----GQGYTVGD---TVSIKHNTTTVTEE-GKVTKVDADGK 139 (663) T ss_pred HHHHhCCCeEEEEecCCcccccc-cccccccceeeEeec----ccCccccc---eeeecccccccccC-cceeeeccCCc Confidence 66678888999998753221111 112233333333332 22222221 11222221111000 00011111111 Q ss_pred eEE--ecc-cccC------CcceEEEEeccccccccccchhhhhhhhhhheecccceEEEEEEEEEeeeccccccc-cch Q lcl|Aclame:pro 301 RIV--TGG-EYPN------QVPFLRVVVSQDIKQNVAGVEKWVPVGFEGIYSVGDFTVIVNELTNVSIPVTDSAII-PPM 370 (742) Q Consensus 301 ~~v--tG~-~~~n------~~p~L~~si~~~~~~~~ag~s~~ip~al~aI~avg~~tv~v~~itnv~~p~tdsa~v-p~~ 370 (742) .+. .+. ...+ ..+.+-........ ..+.....+.+..+++..+..++..... .....+..... ... T Consensus 140 ~~~~~~~~a~~~~~a~~~~~~~~~~~a~~~~v~--~~~~~~~~a~av~~i~~dg~vt~~~~~~--a~~~~~~~~~~~~~~ 215 (663) T protein:vir:10 140 IKALFVPSSAVIAKAKQLGTYPVLGDNWRAEVS--GASGGSAATLTLGGIVVDSGVTFGNSEE--APDVMTSTKVLANFA 215 (663) T ss_pred eeEEEeccccccccccccccccccccceeeEEe--eccccccccceeEeeecCCceeEEeeec--cccccccceeeeecc Confidence 100 000 0000 00001000000000 0000000111112222211111111000 00000000000 000 Q ss_pred hhh---eeeeecccccceeeeeecc-------------ccc-c-----------cc-------------cccccceeeec Q lcl|Aclame:pro 371 RFT---RIEQITLSGGASFSVISNQ-------------PYG-F-----------NI-------------QDSRHSYWLSP 409 (742) Q Consensus 371 ~~~---li~~~~l~~ga~~~vl~~~-------------~~~-~-----------~i-------------~~s~~~~~Ls~ 409 (742) ... .........+....+.... ..+ . +. ....+.+.++. T Consensus 216 ~~~~~~~~a~~~g~~G~~i~v~~~~~~~~~~~~~~~v~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~e~~~ls~ 295 (663) T protein:vir:10 216 KYGMPLISAVYPGEIGSTVEVEVISKTAFQSGAAQPIYPFGGTRASNARSVIQYGPMTDDQFAIIVRRDGIVVESTVLST 295 (663) T ss_pred ccccceeeeecccccCcceeEeecccccccccceeeecccCcccccccccccccccccchhhcccccCCCcccceeeeec Confidence 000 0000000000000000000 000 0 00 00000001111 Q ss_pred cCCcceeeecccccccc---cccceeEeeccccccccc-ceeeeccCCcceEEEecCCccccccccccccccccchhhHH Q lcl|Aclame:pro 410 FKDDELIIGTELVLPAL---DVSTEFGVSSWEEALPEF-SFLMPFQGGSDGYIRVDENEPDTIGRVKITPALLANYERLL 485 (742) Q Consensus 410 l~d~s~~v~td~~a~a~---d~s~~v~l~~~~~~~p~a-~~av~l~gGtdg~i~vd~~~~~~ig~~~~~~~~~a~rtGL~ 485 (742) ..+.....+...+.... ..+..+... ....+.. .....+++|.++. ...+. ....+.++++. T Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~s~~v~~~--~~~~~~~~~~~~~l~gg~~~~--------~~~~~----~d~~~~~~~l~ 361 (663) T protein:vir:10 296 RRGDRDVYGNNIFMDDYFRNGSSNFIYAS--SVNWPAGFTGIIQLGGGASAN--------NAVGS----DELIAGWDLFA 361 (663) T ss_pred cccccccchhhhhhhhhhcCcccceeEee--ccccCcccceeEEecccccCc--------ccchh----hhhhhHHhhhc Confidence 11111100000000000 000000000 0000000 0111222222110 00001 11123455666 Q ss_pred HhhccCCccEEEEcCCCc-----hHHHHHHHHHHHhhcCceEEEEECCCCCC-------hHHHHHHH------------- Q lcl|Aclame:pro 486 PLLTEDQFDLVLTPYLTF-----ADHAGTVNAFINRAENRFLYLFDIAGDDD-------TENLAISL------------- 540 (742) Q Consensus 486 AL~~~d~v~LL~aPg~t~-----s~v~aal~Al~a~a~~R~~aI~D~p~~~~-------t~~~A~a~------------- 540 (742) +++..+.+.+++.|+... ..+++++..+|+.+++ +++++|+|.+.. ..+.+..| T Consensus 362 ~~~~~~~~~~i~~~~~~~~~~~~~~v~~~l~~~~~~~~~-~~ai~d~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 440 (663) T protein:vir:10 362 DREALHVNLMIAGACKSDGVAVASTVQKHVVALADDRQD-CVAFVNPPSELLVGVPTTQAVKNIVEWRNGVTTGGEVVDN 440 (663) T ss_pred cccccCceEEEeecCCCCchhhHHHHHHHHHHHHHhhCC-EEEEEecCcccccccchhhhHHHHHHHhhhccccchhhhh Confidence 666666666777666553 4567778888887654 456678775432 22333444 Q ss_pred HhccCCcEEEEEecceeeccc--cceeEechHHHHHHHHhhhccCceeecCCceeeEe---ee----ccccchhHHhhhc Q lcl|Aclame:pro 541 AGYINSSFATTFFPWVRRLTN--KGMRTVPASLAAYRSIRTTDPETGLAPVGARRGVV---TG----EPVRQVDWEDLYN 611 (742) Q Consensus 541 r~~~~S~~aaL~~PwVkv~d~--~~~~~vPpSgavAGl~ArtD~e~Gv~~SPaN~~I~---~~----~~ls~sE~d~LN~ 611 (742) +++++|+|+++||||+++.|+ +..+++||||++||++||+|.++|+|+||+|+.+. +. ..+++.|++.||+ T Consensus 441 ~~~~~s~~~~l~~p~~~~~d~~~~~~~~~p~s~~vAGl~Ar~D~~~g~~~span~~~~~i~g~~~~~~~~~~~~~~~Ln~ 520 (663) T protein:vir:10 441 NMNISSTYAFISGNYKYQYDKYNDINRWVPLSADIAGLCAYTDQVGHPWMSPAGYRRGQLRNTIKLAIEPKQSLRDTMYQ 520 (663) T ss_pred hcccCcceEEEEecceeEecccCCceEEechHHHHHHHHHHhhccCCcEEccCCeeecceeccccceeecCchhHHHHHh Confidence 457899999999999999875 45788999999999999999999999999998542 22 3567899999999 Q ss_pred CCceEEEEc-C-CCEEEEcceecCCCccccceeehhhhhHHHHHHHHHHHHHhhcccCCHHHHHHHHHHHHHHHHHHHhC Q lcl|Aclame:pro 612 NRINPIVRV-G-NDVLLFGQKTMLNVNSALNRINVRRLLIVMRNRISQILSSYLFENNTSENRLRAEALVRQYLESLRLR 689 (742) Q Consensus 612 ~GINtI~~f-g-~G~rlWGnRTlas~D~~wrfInVRR~~d~Ie~sI~~a~~~~VfEPNd~~l~~~V~~sInafL~~L~~~ 689 (742) +|||+|++| + +||++||+||+++++++|+||++||||+||+++|++.++|+||||||+.+|++|+++|++||++||++ T Consensus 521 ~gin~i~~~~~~~G~~~wG~rT~s~~~s~~~~i~vrR~~~~i~~si~~~~~~~v~epn~~~l~~~i~~~i~~~L~~l~~~ 600 (663) T protein:vir:10 521 VSINPVTGFAGGDGFVLFGDKMATQVPSPFDRINVRRLFNMLKKNIGDTSKYELFENNDAFTRQSFRMEVSQYLDNIRSL 600 (663) T ss_pred CCCcEEEEeeCCCcEEEEcccccCCCCcccceEehhhHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhC Confidence 999999987 4 69999999999777789999999999999999999999999999999999999999999999999999 Q ss_pred CceeeEEEEEcCC-CCHHHhhCCEEEEEEEEEecCCceEEEEEEEEeeceeecC Q lcl|Aclame:pro 690 GAVTDYEVAIDSV-TTPTDIDNNTLRARVTVQPARSIEYIDITFVITPTGVEIT 742 (742) Q Consensus 690 GAL~Gf~V~~Det-Ntp~dI~~GrL~i~I~vaP~~PAEfI~l~f~it~tG~~fs 742 (742) |+|.||+|+||++ |++++|++|+|+++|+++|++|||||+|+|.++++|++|+ T Consensus 601 gal~gf~V~~d~~~nt~~~i~~G~~~~~i~~~p~~pae~I~~~~~~~~~~~~f~ 654 (663) T protein:vir:10 601 GGVYDFRVVCDTTNNTPQVIDSNEFVATIYIKAPRSINYITLNFVATSTGANFD 654 (663) T ss_pred CceeeeEEEEcCCCCCHHHhhCCeEEEEEEEEecCCcceEEEEEEEEecCccHH Confidence 9999999999965 7889999999999999999999999999999999999999 No 12 >protein:vir:6894 Length: 660 # NCBI annotation: gp18 tail sheath protein # Family: family:all:661 # MgeID: mge:140 # MgeName: RB69 # Cross-refs: genbank:acc:NP_861870;genbank:gi:32453661;genbank:GeneID:1494296 Probab=100.00 E-value=9.9e-75 Score=426.30 Aligned_cols=583 Identities=19% Similarity=0.204 Sum_probs=279.5 Q ss_pred CeeeeeeeeeeEecc-ccCCchhhheeeeecCCCCcccceeec-hhHHhh-ccc-ceee-----eehhhhcCcceEEEEc Q lcl|Aclame:pro 1 MYRVNVKEVDLSITP-EVGTPVQTALVGAFDLPIPSELPVSVT-PDEFRR-VGS-TELS-----LIADSLVGGQEVTVIR 71 (742) Q Consensus 1 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~-~~~~-----~~~~~~~~~~~~~~~~ 71 (742) -=-|-|+|+|++-+- .|+|- -.++||-|.- =|-..|+-+| ..||+| .|. ++-+ ..+.-|-||...-|+| T Consensus 5 ~PgVyv~e~~~~~~i~~v~ts-~~~fvG~~~~-Gp~~~p~~i~s~~~~~~~fG~~~~~~~~~~~~~~~f~~~g~~~~vvR 82 (660) T protein:vir:68 5 SPGVELKETTVQSTVVNNSTG-TAALAGKFQW-GPAFQIKQITDEVALVDMFGTPNTDTADYFMSAMNFLQYGNDLRVVR 82 (660) T ss_pred cCceEEEEecCCcccccCCCc-ceeEEecccC-CCCccCEEecCHHHHHHhcCCccCccchhHHHHHHHHhCCCeEEEEE Confidence 223678999876432 34444 4677887765 2556788776 456744 453 1111 1112233444455555 Q ss_pred cCCcccccceeEEEEecceeeehhhheeeeeeeecccCCCcccceeEEEEEccCCCeeEEEeeecCCCcceeEEEEEeec Q lcl|Aclame:pro 72 PRGETQSLNAAFVVVGGYNVTLGAFNVFYLMFLGYDPQKGYTDVSYVDVQLAGTPTDTILFSYSLDGSSTTHSLTINLNA 151 (742) Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (742) --+.+..-|+.- ..+.. . +.....|.+..- T Consensus 83 v~~~~~~~~~~~---------------------------~~~~~---~------------~t~~~~g~~~~~-------- 112 (660) T protein:vir:68 83 AVDRDTAKNSSP---------------------------VAGNI---N------------FTISSAGTNYRV-------- 112 (660) T ss_pred eccccccccccc---------------------------ccccc---e------------eeeeccCcceee-------- Confidence 322222211100 00000 0 000000110000 Q ss_pred eeEeecccceeeeeeeccccceEEEEeecCccccEEEEeecCCCcceEeecccCCCcceeeeeecccccccccCcccce- Q lcl|Aclame:pro 152 PSVTLPSNIVPLFFYYEPYTGSITLQSSVNYSGLTLNYTVSKATTPWVYFAEYGTPTSSLTLYKGFYLEGIDLNSFNKQ- 230 (742) Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 230 (742) |.++....+. +.+ ...|. ...++-+....+ T Consensus 113 --------------------------------g~~~~v~~~~-~~~---------------~~~~~-~~~~~~~~~~~~~ 143 (660) T protein:vir:68 113 --------------------------------GDKVVVKYST-DII---------------EPDGE-VTSVDSDGKILNI 143 (660) T ss_pred --------------------------------eeeeeeeccc-ccc---------------ccccc-ceeeeecCceeee Confidence 0011100000 000 00000 000000000000 Q ss_pred eeEE----EeeeeecccCCceeccceeEEEEEeeccCCCCCccceeeeeeecCCCCCeeeecccCceEEEEcCceEEecc Q lcl|Aclame:pro 231 FVVS----IENITVNREKGQVLYPSFDVVVHFRDIRGVSANTEYIRFRQVNLNPESPNYIERVIGNMTFEFDGERIVTGG 306 (742) Q Consensus 231 ~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vtG~ 306 (742) |+.+ -+...+.+.+. ..-+.+..|.+ +.+.....+....+..++. .+.. ++.+ T Consensus 144 ~~~ta~~~~~a~~~~~~~~----~~~~~~~~v~~--~~~~~~~~~~v~~~~~d~~-----------~~~~------~~~t 200 (660) T protein:vir:68 144 FIPSGKIIAKAKEIGEYPE----LGSNWTAEMSG--SSSGLSAVITIDSVVMDSG-----------ILLT------EVET 200 (660) T ss_pred eeccccccccceeeccccc----cccceeEEeec--ccccceeeeeecccccccc-----------ceee------eecc Confidence 0000 00011111111 11122233332 2222222221111111110 0000 0000 Q ss_pred cccC-CcceEEEEeccccccccccchhhhhhhhhhheecccceEEEEEEEEEeeeccccccccc-hhh---he------- Q lcl|Aclame:pro 307 EYPN-QVPFLRVVVSQDIKQNVAGVEKWVPVGFEGIYSVGDFTVIVNELTNVSIPVTDSAIIPP-MRF---TR------- 374 (742) Q Consensus 307 ~~~n-~~p~L~~si~~~~~~~~ag~s~~ip~al~aI~avg~~tv~v~~itnv~~p~tdsa~vp~-~~~---~l------- 374 (742) .... ..+........ .+..... +.+....+..... ....+......... ... .. T Consensus 201 a~~~~~~~~~~~~~~~------~~~~~~~-----A~~~g~~G~~i~v---~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~ 266 (660) T protein:vir:68 201 SEEAITSLTFQESIKK------YGVPGVV-----ALYPGELGDQLEI---EIVSKADYDKGASAQLKIYPDGGTRYSTAK 266 (660) T ss_pred ccccccccceeeeecc------cCccccc-----cccccccccceEE---EEeccccccccccccceeeeccccccccee Confidence 0000 00000000000 0000000 0000000000000 00000000000000 000 00 Q ss_pred --eeeecccccceeeeeecccccccccccccceeeeccCCcceeeeccccccc---ccccceeEeecccccccccceeee Q lcl|Aclame:pro 375 --IEQITLSGGASFSVISNQPYGFNIQDSRHSYWLSPFKDDELIIGTELVLPA---LDVSTEFGVSSWEEALPEFSFLMP 449 (742) Q Consensus 375 --i~~~~l~~ga~~~vl~~~~~~~~i~~s~~~~~Ls~l~d~s~~v~td~~a~a---~d~s~~v~l~~~~~~~p~a~~av~ 449 (742) ....... +..+.+.... .+. ....+.++...+.........+... ...+..+..... ........... T Consensus 267 ~~~~~~~~~-~~~~~~~v~~-~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~~~~~~~ 339 (660) T protein:vir:68 267 AIFGYGPQT-DDQYAIIVRR-NDS----VVQSVVLSTKRGERDIYGSNIFIDDFFAKGASNYIFATAQ-GWPKGFSGVIK 339 (660) T ss_pred eEeeccccc-ccceeeeeec-CCc----ceeeeeeecccccccccccceeeehhhccCcccEEEEeec-CCCccccceee Confidence 0000000 0000000000 000 0001111111110000000000000 000111111000 00000011112 Q ss_pred ccCCcceEEEecCCccccccccccccccccchhhHHHhhccCCccEEEEcCCCc------hHHHHHHHHHHHhhcCceEE Q lcl|Aclame:pro 450 FQGGSDGYIRVDENEPDTIGRVKITPALLANYERLLPLLTEDQFDLVLTPYLTF------ADHAGTVNAFINRAENRFLY 523 (742) Q Consensus 450 l~gGtdg~i~vd~~~~~~ig~~~~~~~~~a~rtGL~AL~~~d~v~LL~aPg~t~------s~v~aal~Al~a~a~~R~~a 523 (742) +.||.++.... ......+..+++..++..+ +.++++++... ..++.++..+|+.+++++++ T Consensus 340 ~~gg~~~~~~~------------~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~~~~~~~~~~v~~~l~~~~~~~~~~~~~ 406 (660) T protein:vir:68 340 LNGGLSSNETV------------EAGDLMEAWDLFADRESVN-AQLFIAGSCAGESLEVASTVQKHVVAIGDSRQDCLVL 406 (660) T ss_pred ecccccccccc------------ccchhhhHHHHhhhhhccc-cceeeccccCCCchHHHHHHHHHHHHHHHhhCCeEEE Confidence 22222211000 0000111223344444332 34455554332 34567788888877665433 Q ss_pred E-------EECCCCCChHHHHHHHHh----------ccCCcEEEEEecceeeccc--cceeEechHHHHHHHHhhhccCc Q lcl|Aclame:pro 524 L-------FDIAGDDDTENLAISLAG----------YINSSFATTFFPWVRRLTN--KGMRTVPASLAAYRSIRTTDPET 584 (742) Q Consensus 524 I-------~D~p~~~~t~~~A~a~r~----------~~~S~~aaL~~PwVkv~d~--~~~~~vPpSgavAGl~ArtD~e~ 584 (742) + ++.|.+. +.+.+.+|+. +++|+|+++||||+++.|+ +..+++||||++||++||+|.++ T Consensus 407 ~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~p~~~~~d~~~~~~~~~p~sg~~AGl~Ar~d~~~ 485 (660) T protein:vir:68 407 CSPPRAAVVGIPVNR-AVDNLVDWRTASGTYTDNNFNISSTYAAIDGNYKYQYDKYNDVNRWVPLAADIAGLCARTDNIS 485 (660) T ss_pred EcccceeEecCCCCC-CHHHHHHHHhhcccccccccccCcceEEEEcCceEEecccCCceEEechhHHHHHHHHHHhccC Confidence 2 2334343 4556777776 4789999999999999874 56789999999999999999999 Q ss_pred eeecCCceeeEe---e----eccccchhHHhhhcCCceEEEEc-CCCEEEEcceecCCCccccceeehhhhhHHHHHHHH Q lcl|Aclame:pro 585 GLAPVGARRGVV---T----GEPVRQVDWEDLYNNRINPIVRV-GNDVLLFGQKTMLNVNSALNRINVRRLLIVMRNRIS 656 (742) Q Consensus 585 Gv~~SPaN~~I~---~----~~~ls~sE~d~LN~~GINtI~~f-g~G~rlWGnRTlas~D~~wrfInVRR~~d~Ie~sI~ 656 (742) |+|+||+|+.+. + ...++++|++.||++|||||++| ++|+++||+||+++++++|+||||||||+||+++|+ T Consensus 486 g~~~span~~~~~i~g~~~~~~~~~~~~~~~Ln~~gIn~i~~~~~~G~~~wG~rT~~~~~s~~~~i~vrR~~~~i~~si~ 565 (660) T protein:vir:68 486 QPWMSPAGYNRGQILNVIKLAIETRQAQRDRLYQEAINPVTGTGGDGYVLYGDKTATSVPSPFDRINVRRLFNMVKTNIG 565 (660) T ss_pred CcEEccCCeeeceeeccceeeecCChhHHHHHhhCCceEEEEecCCeEEEEcceecCCCCcccceEehhhHHHHHHHHHH Confidence 999999998543 2 23467899999999999999998 679999999999777789999999999999999999 Q ss_pred HHHHHhhcccCCHHHHHHHHHHHHHHHHHHHhCCceeeEEEEEcCC-CCHHHhhCCEEEEEEEEEecCCceEEEEEEEEe Q lcl|Aclame:pro 657 QILSSYLFENNTSENRLRAEALVRQYLESLRLRGAVTDYEVAIDSV-TTPTDIDNNTLRARVTVQPARSIEYIDITFVIT 735 (742) Q Consensus 657 ~a~~~~VfEPNd~~l~~~V~~sInafL~~L~~~GAL~Gf~V~~Det-Ntp~dI~~GrL~i~I~vaP~~PAEfI~l~f~it 735 (742) ++++|+||||||+.+|++|+++|++||++||++|+|.||+|+||++ |++++|++|+|+++|+++|++|||||+|+|.++ T Consensus 566 ~~~~~~v~epn~~~~~~~i~~~i~~~L~~l~~~gal~gf~V~~d~~~nt~~~i~~G~~~~~i~~~p~~pae~i~l~~~~~ 645 (660) T protein:vir:68 566 SASKYRLFELNNAFTRSSFRTETSQYLQGIKALGGVYNFKVVCDTTNNTPAVIDRNEFVATFYLQPARSINYITLNFVAT 645 (660) T ss_pred HHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhcCceeeeEEEEecCCCCHHHhhCCeEEEEEEEEecCCcceEEEEEEEe Confidence 9999999999999999999999999999999999999999999954 888999999999999999999999999999999 Q ss_pred eceeecC Q lcl|Aclame:pro 736 PTGVEIT 742 (742) Q Consensus 736 ~tG~~fs 742 (742) ++|++|+ T Consensus 646 ~~~~~~~ 652 (660) T protein:vir:68 646 ATGADFD 652 (660) T ss_pred ecCccHH Confidence 9999999 No 13 >protein:vir:101187 Length: 663 # NCBI annotation: tail sheath protein # Family: family:all:661 # MgeID: mge:1582 # MgeName: 44RR2.8t # Cross-refs: genbank:acc:NP_932509;genbank:gi:37651635;genbank:GeneID:2610680 Probab=100.00 E-value=8.1e-75 Score=426.77 Aligned_cols=571 Identities=21% Similarity=0.231 Sum_probs=292.4 Q ss_pred Ce---eeeeeeeeeEeccc-cCCchhhheeeeecCCCCcccceeec-hhHHhhc-ccc----eee--eehhhhcCcceEE Q lcl|Aclame:pro 1 MY---RVNVKEVDLSITPE-VGTPVQTALVGAFDLPIPSELPVSVT-PDEFRRV-GST----ELS--LIADSLVGGQEVT 68 (742) Q Consensus 1 ~~---~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~----~~~--~~~~~~~~~~~~~ 68 (742) -| -|-|+|+|++.+-+ |+|- ..|+||-|.-- |-.-|+-|| ..||.|. |.- .++ ....-+-||...- T Consensus 2 ~~~~PgVyv~e~~~~~~i~~v~ts-~~~fvG~~~~G-p~~~p~~i~s~~d~~~~fG~~~~~~~~~~~v~~~f~ngg~~~~ 79 (663) T protein:vir:10 2 ALLSPGIEMKETSINSTVVRSATG-RAAIVGKFAWG-PAYEVRQVTNEVELVDMFGSPDNVTAPYFMSAMNFLQYGNDLR 79 (663) T ss_pred ceecCceEEEEecCcccccccCcc-ceeEEeeeccC-CCCccEEecCHHHHHHHhCCcCccchhHHHHHHHHHhCCCeEE Confidence 12 36688998765433 3443 56788888753 335677665 5677654 331 110 1112244555555 Q ss_pred EEccCCcccccceeEEEEecceeeehhhheeeeeeeecccCCCcccceeEEEEEccCCCeeEEEeeecCCCcceeEEEEE Q lcl|Aclame:pro 69 VIRPRGETQSLNAAFVVVGGYNVTLGAFNVFYLMFLGYDPQKGYTDVSYVDVQLAGTPTDTILFSYSLDGSSTTHSLTIN 148 (742) Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (742) |.|--+.+..-|+.- ..++.. -++.-. ++...-...++ T Consensus 80 vvRv~~~~~~~~a~~-~~~~~~-------------------------------------~~~~~~----~~~~~~g~~~~ 117 (663) T protein:vir:10 80 LVRVIDMEKAKNASP-LVNQVS-------------------------------------VTITTE----GQGYTVGDAIT 117 (663) T ss_pred EEEccCCcccccccc-cCCcce-------------------------------------eeeecc----ccCcccccccc Confidence 555433332222110 000000 000000 00000000111 Q ss_pred eeceeEeecccceeeeeeeccccceEEEEeecCccccEEEEeecCCCcceEeecccCCCcceeeeeecccccccccCccc Q lcl|Aclame:pro 149 LNAPSVTLPSNIVPLFFYYEPYTGSITLQSSVNYSGLTLNYTVSKATTPWVYFAEYGTPTSSLTLYKGFYLEGIDLNSFN 228 (742) Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (742) +.+.+-. +.. .++. .+.+-|... T Consensus 118 v~~~~~~----~~~--------~~~~---------------------------------------------~~~~~n~~~ 140 (663) T protein:vir:10 118 VKYNNAT----ITE--------AGKV---------------------------------------------TAVDSDGKI 140 (663) T ss_pred ccccccc----ccc--------ccce---------------------------------------------eeeccCCce Confidence 1110000 000 0000 000001111 Q ss_pred -ceeeEEEeeeeecccCCceeccceeEEEEEeeccCCCCCccceeeeeeecCCCCCeeeecccCceEEEEcCceEEeccc Q lcl|Aclame:pro 229 -KQFVVSIENITVNREKGQVLYPSFDVVVHFRDIRGVSANTEYIRFRQVNLNPESPNYIERVIGNMTFEFDGERIVTGGE 307 (742) Q Consensus 229 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vtG~~ 307 (742) .-|+-..+....++.-+.+.+..-....+|....... ..+.++..++..-.....+ +.+. T Consensus 141 ~~v~~~~a~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~---------------~~~~~v~~vv~~~~~~~~~----~~~a 201 (663) T protein:vir:10 141 KSLFVPTAEIIAKTRQLGTYPTLGDNWRIDVSGASGGS---------------AAALALGNIVVDSGVTFGN----SEDA 201 (663) T ss_pred EEEEeccccccccccccceeeeccccceeEeeeccccc---------------cccccccceecccceeeEe----eccc Confidence 0011111112222333333333333333343321111 1111122222111000000 0111 Q ss_pred ccC-------------------------CcceEEEEeccccccccccchhhhhhhhhhheecccceEEEEEEEEEeeecc Q lcl|Aclame:pro 308 YPN-------------------------QVPFLRVVVSQDIKQNVAGVEKWVPVGFEGIYSVGDFTVIVNELTNVSIPVT 362 (742) Q Consensus 308 ~~n-------------------------~~p~L~~si~~~~~~~~ag~s~~ip~al~aI~avg~~tv~v~~itnv~~p~t 362 (742) ..+ ++..+++.+..... ...+. ...+..... T Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~a~~~G~~Gn~i~v~i~~~~~-------------------~~~~~-----~~~v~~~~~ 257 (663) T protein:vir:10 202 PAVMTSPAVMEKYAKFGMPLVSAVYPGEIGSTVEVEIVSKTA-------------------FNSGA-----QQTIYPFGG 257 (663) T ss_pred cccccccchhhhcccccceeeeeecccccccceeEEeccccc-------------------ccccc-----ccccccccc Confidence 111 11111111111000 00000 000000000 Q ss_pred ccccccchhhheeeeecccccceeeeeecccccccccccccceeeeccCCcceeeecccccccc---cccceeEeecccc Q lcl|Aclame:pro 363 DSAIIPPMRFTRIEQITLSGGASFSVISNQPYGFNIQDSRHSYWLSPFKDDELIIGTELVLPAL---DVSTEFGVSSWEE 439 (742) Q Consensus 363 dsa~vp~~~~~li~~~~l~~ga~~~vl~~~~~~~~i~~s~~~~~Ls~l~d~s~~v~td~~a~a~---d~s~~v~l~~~~~ 439 (742) ...................+.+.... .+. ......++...+.+...++..+.... ..+..+... .. T Consensus 258 ----~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~----~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~ 326 (663) T protein:vir:10 258 ----TRTSNARGVIQYGPMTDDQFAIIVRR-DGI----VVESTVLSTRKGDRDVYGSNIFMDDYFRNGGSNFIFAS--SE 326 (663) T ss_pred ----ccccccceeeeeccccccceeEEEec-CCc----ceeeeeeeecccccccchhhhhhhhhhccCcceEEEEe--ec Confidence 00000000000000000011110000 000 01111122222222222222111110 001111111 11 Q ss_pred cccc-cceeeeccCCcceEEEecCCccccccccccccccccchhhHHHhhccC--CccEEEEcCC--Cc----hHHHHHH Q lcl|Aclame:pro 440 ALPE-FSFLMPFQGGSDGYIRVDENEPDTIGRVKITPALLANYERLLPLLTED--QFDLVLTPYL--TF----ADHAGTV 510 (742) Q Consensus 440 ~~p~-a~~av~l~gGtdg~i~vd~~~~~~ig~~~~~~~~~a~rtGL~AL~~~d--~v~LL~aPg~--t~----s~v~aal 510 (742) ..|. ......+.+|.|+...+ +. .....++.+|+..+ .++++++|.. .. ..++.++ T Consensus 327 ~~~~~~~~~~~l~gg~d~~~~~--------~~-------~~~~~~~~~l~~~~~~~~~~~i~~~~~~~~~~~~~~v~~al 391 (663) T protein:vir:10 327 GWPAGFTGIIQLGGGTSANADV--------GA-------DELIKGWDLFSDREALHVNLMIAGACGSDGAEIASTVQKYV 391 (663) T ss_pred ccCccccceeEcccccCCCccc--------cc-------hhhHHHHHhhhcccccceeEEEeccCCCCchhhHHHHHHHH Confidence 1111 11223444444331100 00 01122444554443 3456666543 22 4466677 Q ss_pred HHHHHhhcCceEEEEECCCC-------CChHHHHHHHHh-------------ccCCcEEEEEecceeeccc--cceeEec Q lcl|Aclame:pro 511 NAFINRAENRFLYLFDIAGD-------DDTENLAISLAG-------------YINSSFATTFFPWVRRLTN--KGMRTVP 568 (742) Q Consensus 511 ~Al~a~a~~R~~aI~D~p~~-------~~t~~~A~a~r~-------------~~~S~~aaL~~PwVkv~d~--~~~~~vP 568 (742) ..+|+.++++ ++++|+|.+ ..+.+.+.+|+. +++|+|+++||||+++.|+ +..+++| T Consensus 392 ~~~a~~~~~~-~ai~d~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~P~~~~~d~~~~~~~~~p 470 (663) T protein:vir:10 392 VSLADDRQDC-VAIVNPPAELMVGIPTSTAVKNIVEWRNGMTGSGEVVDNNMNISSTYAFIIGNYKYQYDKYNDINRWVP 470 (663) T ss_pred HHHHHhhCCE-EEEEecCcccccccccccchHHHHHHHHhccccccchhhccccCcceEEEEccceEEecccCCceEEec Confidence 7788776544 556677753 224455666653 5789999999999999875 5678899 Q ss_pred hHHHHHHHHhhhccCceeecCCceeeEe---e----eccccchhHHhhhcCCceEEEEc-C-CCEEEEcceecCCCcccc Q lcl|Aclame:pro 569 ASLAAYRSIRTTDPETGLAPVGARRGVV---T----GEPVRQVDWEDLYNNRINPIVRV-G-NDVLLFGQKTMLNVNSAL 639 (742) Q Consensus 569 pSgavAGl~ArtD~e~Gv~~SPaN~~I~---~----~~~ls~sE~d~LN~~GINtI~~f-g-~G~rlWGnRTlas~D~~w 639 (742) |||++||++||+|.++|+|+||+|+.+. + ...+++.|++.||++|||||++| + +|+++||+||+.+++++| T Consensus 471 ~s~~vAGl~Ar~D~~~g~~~sPan~~~~~i~g~~~~~~~~~~~~~~~Ln~~gin~i~~~~~~~G~~~wG~rT~s~~~s~~ 550 (663) T protein:vir:10 471 LAADIAGLCAYTDQVSHPWMSPAGYRRGQIRNCIKLAIEPKQSMRDTMYQVAINPVTGFAGGDGFVLFGDKMATQVPSPF 550 (663) T ss_pred hhHHHHHHHHHhhccCCceEccCCceeccccccccceeccChhHHHHHhhCCceEEEEEeCCCcEEEEcccccCCCCccc Confidence 9999999999999999999999998532 2 23577899999999999999997 3 699999999997777799 Q ss_pred ceeehhhhhHHHHHHHHHHHHHhhcccCCHHHHHHHHHHHHHHHHHHHhCCceeeEEEEEcCC-CCHHHhhCCEEEEEEE Q lcl|Aclame:pro 640 NRINVRRLLIVMRNRISQILSSYLFENNTSENRLRAEALVRQYLESLRLRGAVTDYEVAIDSV-TTPTDIDNNTLRARVT 718 (742) Q Consensus 640 rfInVRR~~d~Ie~sI~~a~~~~VfEPNd~~l~~~V~~sInafL~~L~~~GAL~Gf~V~~Det-Ntp~dI~~GrL~i~I~ 718 (742) +|||+||||+||+++|++.++|+||||||+.+|++|+++|++||++||++|+|.||+|+||++ |++++|++|+|+++|+ T Consensus 551 ~~i~vrR~~~~i~~si~~~~~~~v~e~n~~~l~~~i~~~i~~~L~~l~~~gal~g~~v~~d~~~nt~~~i~~G~~~~~i~ 630 (663) T protein:vir:10 551 DRINVRRLFNMLKKNIGDTSKYELFENNDAFTRQSFRMETSQYLDGIRSLGGCYDFRVVCDTTNNTPNVIDRNEFVGTIY 630 (663) T ss_pred ceEehhhHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhcCceeeeEEEEcCCCCCHHHhhCCeEEEEEE Confidence 999999999999999999999999999999999999999999999999999999999999965 7889999999999999 Q ss_pred EEecCCceEEEEEEEEeeceeecC Q lcl|Aclame:pro 719 VQPARSIEYIDITFVITPTGVEIT 742 (742) Q Consensus 719 vaP~~PAEfI~l~f~it~tG~~fs 742 (742) ++|++|||||+|||.++++|++|+ T Consensus 631 ~~p~~pae~i~~~~~~~~~~~~~~ 654 (663) T protein:vir:10 631 VKPPRSINYITLNMVATSTGANFD 654 (663) T ss_pred EEecCCcceEEEEEEEeecCccHH Confidence 999999999999999999999999 No 14 >protein:vir:104858 Length: 729 # NCBI annotation: T4-like tail sheath protein # Family: family:all:661 # MgeID: mge:1630 # MgeName: P-SSM2 # Cross-refs: genbank:acc:YP_214361;genbank:gi:61806001;genbank:GeneID:3294378 Probab=100.00 E-value=1.3e-74 Score=425.61 Aligned_cols=649 Identities=19% Similarity=0.183 Sum_probs=298.8 Q ss_pred Ce------eeeeeeeeeEeccccCCch-hhheeeeecCCCCcccceeec-hhHH-hhcccc---eee-----eehhhhcC Q lcl|Aclame:pro 1 MY------RVNVKEVDLSITPEVGTPV-QTALVGAFDLPIPSELPVSVT-PDEF-RRVGST---ELS-----LIADSLVG 63 (742) Q Consensus 1 ~~------~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~---~~~-----~~~~~~~~ 63 (742) |- -|-|+|+|....|-.|-+- ..++||-+.-- |-.-|+.+| ..|| |..|+- +-. ....-+-| T Consensus 1 m~~~~~~PgVyv~e~~~~~~~i~~v~ts~~~fvG~~~~G-p~~~p~~i~s~~~~~~~fG~~~~~~~~~~~~~~~~~f~ng 79 (729) T protein:vir:10 1 MPLNLASPGIVVREVDLTIGRVDPTSGSIGALVAPFAKG-PVNDPQLIESEEDLLQTFGQPYSTDKHYEYWMVASSYLAY 79 (729) T ss_pred CCccccCCceEEEEecCCCcccccccccceeEEeccccC-CCccCeEcCCHHHHHHHcCccccCCcchhHHHHHHHHHhC Confidence 43 4789999997665544432 36788887743 446677775 5678 566762 211 12234458 Q ss_pred cceEEEEccCCcccccceeEEEEecceeeehhhheeeeeeeeccc-CCCcccceeEEEEEccCCCeeEEEeeecCCCcce Q lcl|Aclame:pro 64 GQEVTVIRPRGETQSLNAAFVVVGGYNVTLGAFNVFYLMFLGYDP-QKGYTDVSYVDVQLAGTPTDTILFSYSLDGSSTT 142 (742) Q Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (742) |....|+|--++...-..... +. +.-+. .+. ..++. +.-...... .. . ..+.. T Consensus 80 g~~~~vvRv~~~~~~~a~~~~--~a--~~~~~----------~~~~~~~~~------~~~~~~~~~--~~---~-~~~~~ 133 (729) T protein:vir:10 80 GGTMQVVRADDYNTQTGVGLK--NA--FVTGG----------VGVGATMLR------ITSNTHYNQ--LG---Y-DENTI 133 (729) T ss_pred CceEEEEecCccccccccccc--cc--ccccc----------ccccccccc------ccccccccc--cc---c-ccCCC Confidence 888888887666543222110 00 00000 000 00000 000000000 00 0 00111 Q ss_pred eEEEEEeeceeEeecccceeeeeeeccccceEEEEeecCccccEEEEeecCCCcceEeecccCCCcceeeeeeccccccc Q lcl|Aclame:pro 143 HSLTINLNAPSVTLPSNIVPLFFYYEPYTGSITLQSSVNYSGLTLNYTVSKATTPWVYFAEYGTPTSSLTLYKGFYLEGI 222 (742) Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (742) ..+++...+| +. --.++++.+.-..+.-.+.+....+. ...+.++--+. +. T Consensus 134 ~~~~~~a~~~-----G~---------------------~gn~~~v~v~~~~~~~~~~~~~~~~~--~~~t~~~~~~~-~~ 184 (729) T protein:vir:10 134 SGVSVAAKNP-----GT---------------------WANGIKVAIIDGKADQILTVASGNTT--AVGSAVTQSIS-KT 184 (729) T ss_pred cceEEEEecc-----Cc---------------------cccceeeEEecccCcceeeeeccccc--cceeeeeeecc-cc Confidence 2233322221 10 00122222221111111111000000 00011100000 00 Q ss_pred ccCcccceeeEEEeeeeecccCCceeccc-eeEEEEEeeccCCCCCccceeeeeeecCCCCCeeeecccCceEEEE---c Q lcl|Aclame:pro 223 DLNSFNKQFVVSIENITVNREKGQVLYPS-FDVVVHFRDIRGVSANTEYIRFRQVNLNPESPNYIERVIGNMTFEF---D 298 (742) Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~ 298 (742) .-+. .......+...+...... -+..+..-+ ..+..+++-. ...... -......-+.+.... . T Consensus 185 ~~~~-------~~~~~~~~~~~~~~~~~~~~~~~v~~~s-~~~~~~~~~~----~~~~~~-~~~~~~~~~s~~~~a~~~~ 251 (729) T protein:vir:10 185 IGTA-------TGTTTIDGVLKGIVTGSTDTTLEVKVIS-HISAAGVETA----VEYQQN-GTYTFDNSGSVNVIAAGSS 251 (729) T ss_pred cccc-------ccceeeeeeecccccccccccccceecc-ccccccccee----cccccc-ceeeecccCccceeeeccc Confidence 0000 000000000111111000 000000000 0000111000 000000 000000000000000 0 Q ss_pred C---ceEEecccccCCcceEEEEeccccccccccchhhhhhhhhhheecccceEEEEEEEEEeeeccccccccchhhhee Q lcl|Aclame:pro 299 G---ERIVTGGEYPNQVPFLRVVVSQDIKQNVAGVEKWVPVGFEGIYSVGDFTVIVNELTNVSIPVTDSAIIPPMRFTRI 375 (742) Q Consensus 299 g---~~~vtG~~~~n~~p~L~~si~~~~~~~~ag~s~~ip~al~aI~avg~~tv~v~~itnv~~p~tdsa~vp~~~~~li 375 (742) | ....+. ..............+ .+. .....|......++.... ...+-.....-..+..... ...+.. T Consensus 252 ~~~~~~~~t~--~~~~~~~~~~~~~~~-~~~---~~~~~~~~~t~~~~~~~~--~~~d~~~~~~~d~~~~~~~-~~g~vv 322 (729) T protein:vir:10 252 GSGSAKSYTA--QTDWFESQNIVLSNS-TLE---WDSIADAPGTSTYVSTRG--GKNDEIHVLVIDDKGTITG-NSGTIL 322 (729) T ss_pred ccccccccee--eeccccccccccccc-ccc---cccccccccccccccccc--ccccccceeeecccccccc-Ccccce Confidence 0 000000 000000000000000 000 000000000000000000 0000000000000000000 000000 Q ss_pred eeecccccceeeeeecccccccccccccceeeeccCCc-ceeeecccc----cccccccceeEeeccc---------ccc Q lcl|Aclame:pro 376 EQITLSGGASFSVISNQPYGFNIQDSRHSYWLSPFKDD-ELIIGTELV----LPALDVSTEFGVSSWE---------EAL 441 (742) Q Consensus 376 ~~~~l~~ga~~~vl~~~~~~~~i~~s~~~~~Ls~l~d~-s~~v~td~~----a~a~d~s~~v~l~~~~---------~~~ 441 (742) +.+..+...... ........+....+... ..+...... ................ ... T Consensus 323 --------e~~~~~s~~~~~-~~~~~~~~~~~~vi~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~ 393 (729) T protein:vir:10 323 --------EKHLSLSKAKDA-EYSVGSSSYWRDFLATNSKYIFGGGATSGITTTGYSVSSTNTLDTDSGWDQNAEGVNFG 393 (729) T ss_pred --------eeeeeeeecccc-ccccccccccceeeccccceeeecccccccccccccccccceecccccccccccccccc Confidence 000000000000 00000000000000000 000000000 0000000000000000 000 Q ss_pred cccceeeeccCCcceEEEecCCccccccccccccccccchhhHHHhhccCCcc--EEEEcC-----CCchHHHHHHHHHH Q lcl|Aclame:pro 442 PEFSFLMPFQGGSDGYIRVDENEPDTIGRVKITPALLANYERLLPLLTEDQFD--LVLTPY-----LTFADHAGTVNAFI 514 (742) Q Consensus 442 p~a~~av~l~gGtdg~i~vd~~~~~~ig~~~~~~~~~a~rtGL~AL~~~d~v~--LL~aPg-----~t~s~v~aal~Al~ 514 (742) ........+++|.+....... ........+....++|+++|+..+.+. ++++++ .....++.++..+| T Consensus 394 ~~~~~~~~~~~g~~~~~~~~~-----~~~~~~~~~~~~~~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~a~~~~~ 468 (729) T protein:vir:10 394 ASGVATLTLAGGTNYGDKTDL-----TTSGALSSGVDDIISGYTLFENTEEIEVDFILMGAAHHPKEQSQAVAEKVTAVA 468 (729) T ss_pred ccceeEEEeeccccccccccc-----ccccccccchhHHHHHHHHhhcccccccceeeecCCCCCccchHHHHHHHHHHH Confidence 001111222333322111110 000011112233578999998776543 333332 23456677788888 Q ss_pred HhhcCceEEEEECCCC----------------CChHHHHHHHHhcc-CCcEEEEEecceeeccc--cceeEechHHHHHH Q lcl|Aclame:pro 515 NRAENRFLYLFDIAGD----------------DDTENLAISLAGYI-NSSFATTFFPWVRRLTN--KGMRTVPASLAAYR 575 (742) Q Consensus 515 a~a~~R~~aI~D~p~~----------------~~t~~~A~a~r~~~-~S~~aaL~~PwVkv~d~--~~~~~vPpSgavAG 575 (742) +.++++ +++++.|.. .+..+.+..+++.+ +++|+++||||+++.|+ +..+++|||+++|| T Consensus 469 ~~~~~~-~a~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~d~~~~~~~~~p~s~~~aG 547 (729) T protein:vir:10 469 EARKDA-VAFISPYRQAFLNDTVSGTVTVSNIDQTTENVVGFYAPLSSSTYSVFDSGYKYMFDRFNNTFRYVPLNGDIAG 547 (729) T ss_pred HhcCCe-EEEecccccccccccccccccccccchhhHHHHHHHhhccCCceEEEEcCeeEEecccCCceEEechhHHHHH Confidence 876554 444454421 12334456666665 46899999999999874 55679999999999 Q ss_pred HHhhhccCceeecCCceeeEeee-------ccccchhHHhhhcCCceEEEEc-CCCEEEEcceecCCCccccceeehhhh Q lcl|Aclame:pro 576 SIRTTDPETGLAPVGARRGVVTG-------EPVRQVDWEDLYNNRINPIVRV-GNDVLLFGQKTMLNVNSALNRINVRRL 647 (742) Q Consensus 576 l~ArtD~e~Gv~~SPaN~~I~~~-------~~ls~sE~d~LN~~GINtI~~f-g~G~rlWGnRTlas~D~~wrfInVRR~ 647 (742) ++||+|.++|+|+||+|+.+.+. ..++++|++.||++|||||++| ++|+++||+||++++|++|+|||+||| T Consensus 548 l~a~~d~~~g~~~span~~~~~i~g~~~~~~~~~~~~~~~Ln~~gIn~i~~~~~~G~~~wG~rT~~~~d~~~~~i~vrR~ 627 (729) T protein:vir:10 548 TCARTDIEQFPWFSPAGTARGPILNSVKLVYNPGKKQRDILYSNRINPVILSPGAGIILFGDKTGFGKSSAFDRINVRRL 627 (729) T ss_pred HHHHhhccCCcEEccCCccccceecccceeeecChhhHhhhhhCCceEEEEecCCeEEEEcceecCCCCcccceeehhhh Confidence 99999999999999999864322 3467899999999999999998 689999999999889999999999999 Q ss_pred hHHHHHHHHHHHHHhhcccCCHHHHHHHHHHHHHHHHHHHhCCceeeEEEEEcCC-CCHHHhhCCEEEEEEEEEecCCce Q lcl|Aclame:pro 648 LIVMRNRISQILSSYLFENNTSENRLRAEALVRQYLESLRLRGAVTDYEVAIDSV-TTPTDIDNNTLRARVTVQPARSIE 726 (742) Q Consensus 648 ~d~Ie~sI~~a~~~~VfEPNd~~l~~~V~~sInafL~~L~~~GAL~Gf~V~~Det-Ntp~dI~~GrL~i~I~vaP~~PAE 726 (742) ++||+++|++.++|+||||||+.+|++|+++|++||++||++|+|.||+|+||++ |+++||++|+|+++|+++|++|+| T Consensus 628 ~~~i~~si~~~~~~~v~epn~~~~~~~i~~~i~~~L~~l~~~g~l~g~~v~~d~~~nt~~~i~~G~~~~~v~~~p~~p~e 707 (729) T protein:vir:10 628 FIYLEDAISAAAKDQLFEFNDELTRTNFVNIVEPFLRDVQAKRGIFDFVVICDETNNTAAVIDSNEFVADIFIKPARSIN 707 (729) T ss_pred HHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhccceeeeEEEEcCCCCCHHHhhCCeEEEEEEEEecCCcc Confidence 9999999999999999999999999999999999999999999999999999965 788999999999999999999999 Q ss_pred EEEEEEEEeeceeecC Q lcl|Aclame:pro 727 YIDITFVITPTGVEIT 742 (742) Q Consensus 727 fI~l~f~it~tG~~fs 742 (742) ||+|+|.+++++++|+ T Consensus 708 ~i~~~~~~~~~~~~~~ 723 (729) T protein:vir:10 708 FIGLTFVATRTGVAFE 723 (729) T ss_pred EEEEEEEEeecCccHH Confidence 9999999999999999 No 15 >protein:vir:101804 Length: 663 # NCBI annotation: gp18 # Family: family:all:661 # MgeID: mge:1580 # MgeName: 31 # Cross-refs: genbank:acc:YP_238881;genbank:gi:66391956;genbank:GeneID:3416631 Probab=100.00 E-value=1.8e-75 Score=430.39 Aligned_cols=558 Identities=18% Similarity=0.185 Sum_probs=275.1 Q ss_pred eeceeEeecccceeeeeeeccccceEEEEeecCccccEEEEeecCCC-cceE------eecccCCCcceeeeeecccccc Q lcl|Aclame:pro 149 LNAPSVTLPSNIVPLFFYYEPYTGSITLQSSVNYSGLTLNYTVSKAT-TPWV------YFAEYGTPTSSLTLYKGFYLEG 221 (742) Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~------~~~~~~~~~~~~~~~~~~~~~~ 221 (742) |+| .- |=-|-=|-+ |+-.+..---.-.--+-++---|. .|.. |...||-|...- |-.|...+ T Consensus 1 ~~~---~~-----Pgvyv~e~~-~~~~i~~~~t~~~~~vG~~~~Gp~~~p~~v~~~~~~~~~fg~~~~~~--~~~~~~~~ 69 (663) T protein:vir:10 1 MAL---LS-----PGIEMKETS-INSTVVRSATGRAAIVGKFAWGPAYEVRQVTNEVELVDMFGSPDNVT--APYFMSAM 69 (663) T ss_pred Cce---ec-----CceEEEEec-CCccccccCcccceeEeecccCCCCccEEecCHHHHHHhcCCcCCcc--hhHHHHHH Confidence 111 12 223333332 433322110001111223321121 2322 224567666532 34444555 Q ss_pred cccCcccceeeEEEeeeeecccCCceeccceeEEEEEeeccCCCCCccceeeeeeecCCCCCeeeecccCc---eEEEEc Q lcl|Aclame:pro 222 IDLNSFNKQFVVSIENITVNREKGQVLYPSFDVVVHFRDIRGVSANTEYIRFRQVNLNPESPNYIERVIGN---MTFEFD 298 (742) Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~ 298 (742) .=||+-++-+|+.+-+-.-.+..+ -++.+....+.-.. .+... .+.++++--.-..+.+.....+-++ ..+... T Consensus 70 ~f~ngg~~~~vvRv~~~~~~~~a~-~~~~~~~~~~~~~~-~~~~~-g~~i~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 146 (663) T protein:vir:10 70 NFLQYGNDLRLVRVIDMEKAKNAS-PLVNQVSVTITTEG-QGYTV-GDAITVKYNNATITEAGKVTAVDSDGKIKSLFVP 146 (663) T ss_pred HHHhCCCeEEEEEccCCccccccc-cccccceeEEeecc-ccccc-ccccccccccccccccccceeeecccceEEEeec Confidence 557888888999874322111111 13334433333222 11111 1223221111111111111122211 111111 Q ss_pred CceEEecccccCCcceEEEEeccccccccccchhhhhhhhhhheecccceEEEEEE--EEEeeeccccccccchhhheee Q lcl|Aclame:pro 299 GERIVTGGEYPNQVPFLRVVVSQDIKQNVAGVEKWVPVGFEGIYSVGDFTVIVNEL--TNVSIPVTDSAIIPPMRFTRIE 376 (742) Q Consensus 299 g~~~vtG~~~~n~~p~L~~si~~~~~~~~ag~s~~ip~al~aI~avg~~tv~v~~i--tnv~~p~tdsa~vp~~~~~li~ 376 (742) ..+.+.....+++-|.+.-......+....+. ..+.....+. ++.+..+... .....+........ ....... T Consensus 147 ta~~~~~~~~v~~~~~~~~~~~~~~s~~s~~~--~~a~~v~~v~--~d~~~~v~~~~~a~~~~t~~~~~~~~-~~~~~~~ 221 (663) T protein:vir:10 147 TAEIIAKTRQLGTYPTLGDNWRIDVSGASGGS--AAALALGNIV--VDSGVTFGNSEDAPAVMTSPAVMEKY-AKFGMPL 221 (663) T ss_pred cccccccccccccceeeccceeeEeeeccCcc--ccccccceec--cccceEEeeccccccccccccccccc-cccccce Confidence 11111112222221111110000000000000 0000111111 1111110000 00000000000000 0000000 Q ss_pred eecccc---cceeeeeeccccccc------------cccc--cc------------------------ceeeeccCCcce Q lcl|Aclame:pro 377 QITLSG---GASFSVISNQPYGFN------------IQDS--RH------------------------SYWLSPFKDDEL 415 (742) Q Consensus 377 ~~~l~~---ga~~~vl~~~~~~~~------------i~~s--~~------------------------~~~Ls~l~d~s~ 415 (742) ...... +....+......... .... .. ...++...+... T Consensus 222 i~A~~~G~~Gn~i~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~ 301 (663) T protein:vir:10 222 ISAVYPGEIGSTVEVEIVSKTAFNSGAQQTIYPFGGTRTSNARGVIQYGPMTDDQFAIIVRRDGIVVESTVLSTRKGDRD 301 (663) T ss_pred EEeccCCcccceeeeeeccccccccccccceecccccccccccceeecccccccceeeEeecCCcceeeecccccccccc Confidence 000000 000000000000000 0000 00 000000000000 Q ss_pred eeecccccccc-cccceeEeecccccccc-cceeeeccCCcceEEEecCCccccccccccccccccc-hhhHHHhhccC- Q lcl|Aclame:pro 416 IIGTELVLPAL-DVSTEFGVSSWEEALPE-FSFLMPFQGGSDGYIRVDENEPDTIGRVKITPALLAN-YERLLPLLTED- 491 (742) Q Consensus 416 ~v~td~~a~a~-d~s~~v~l~~~~~~~p~-a~~av~l~gGtdg~i~vd~~~~~~ig~~~~~~~~~a~-rtGL~AL~~~d- 491 (742) ..++..+.... .......+.......+. ......+++|.|+. ......+ ..++.+++..+ T Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gg~d~~----------------~~~~~~~~~~~~~~l~~~~~ 365 (663) T protein:vir:10 302 VYGSNIFMDDYFRNGGSNFIFASSEGWPAGFTGIIQLGGGTSAN----------------ADVGADELIKGWDLFSDREA 365 (663) T ss_pred cccchhhhhhhhcCCcceEEEEeecccCccccceeEeccccCCc----------------cccchhhhHHHHHhhhcccc Confidence 00000000000 00000000000000000 00011111211110 0000111 22344444433 Q ss_pred -CccEEEEcCCCc------hHHHHHHHHHHHhhcCceEEEEECCCCC-------ChHHHHHHHHh-------------cc Q lcl|Aclame:pro 492 -QFDLVLTPYLTF------ADHAGTVNAFINRAENRFLYLFDIAGDD-------DTENLAISLAG-------------YI 544 (742) Q Consensus 492 -~v~LL~aPg~t~------s~v~aal~Al~a~a~~R~~aI~D~p~~~-------~t~~~A~a~r~-------------~~ 544 (742) .++++++|.... ..++.++.++|+.+++ +++++|+|.+. ++.+.+.+|++ ++ T Consensus 366 ~~~~~~i~~~~~~~~~~~~~~v~~~l~~~a~~~~~-~~ai~d~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 444 (663) T protein:vir:10 366 LHVNLMIAGACGSDGAEIASTVQKYVVSLADDRQD-CVAIVNPPAELMVGIPTSTAVKNIVEWRNGMTGSGEVVDNNMNI 444 (663) T ss_pred cceeEEEeccCCCCchhhHHHHHHHHHHHHHhhCC-EEEEEecCcccccccccccchHHHHHHHHhccccccchhhhccc Confidence 345666654321 3456667777776654 45566777532 23444555553 57 Q ss_pred CCcEEEEEecceeeccc--cceeEechHHHHHHHHhhhccCceeecCCceeeE---eee----ccccchhHHhhhcCCce Q lcl|Aclame:pro 545 NSSFATTFFPWVRRLTN--KGMRTVPASLAAYRSIRTTDPETGLAPVGARRGV---VTG----EPVRQVDWEDLYNNRIN 615 (742) Q Consensus 545 ~S~~aaL~~PwVkv~d~--~~~~~vPpSgavAGl~ArtD~e~Gv~~SPaN~~I---~~~----~~ls~sE~d~LN~~GIN 615 (742) +|+|+++||||+++.|+ +..+++||||++||++||+|.++|+|+||+|+.+ .+. ..+++.|++.||++||| T Consensus 445 ~s~~~~~~~p~~~~~d~~~~~~~~~p~sg~vAGl~Ar~D~~~g~~~sPan~~~~~i~g~~~~~~~~~~~e~~~Ln~~gin 524 (663) T protein:vir:10 445 SSTYAFIIGNYKYQYDKYNDINRWVPLAADIAGLCAYTDQVSHPWMSPAGYRRGQIRNCIKLAIEPKQSMRDTMYQVAIN 524 (663) T ss_pred CccceEEEcCceEEecccCCceEEechhHHHHHHHHHhhccCCceEccCCceeccccccccceeecChhHHHHHhhCCce Confidence 89999999999999875 5668899999999999999999999999999753 222 34678999999999999 Q ss_pred EEEEc-C-CCEEEEcceecCCCccccceeehhhhhHHHHHHHHHHHHHhhcccCCHHHHHHHHHHHHHHHHHHHhCCcee Q lcl|Aclame:pro 616 PIVRV-G-NDVLLFGQKTMLNVNSALNRINVRRLLIVMRNRISQILSSYLFENNTSENRLRAEALVRQYLESLRLRGAVT 693 (742) Q Consensus 616 tI~~f-g-~G~rlWGnRTlas~D~~wrfInVRR~~d~Ie~sI~~a~~~~VfEPNd~~l~~~V~~sInafL~~L~~~GAL~ 693 (742) ||++| + +|+++||+||+++++++|+||||||||+||+++|++.++|+||||||+.+|++|+++|++||++||++|+|. T Consensus 525 ~i~~~~~~~G~~~wG~rT~~~~~s~~~~i~vrR~~~~i~~si~~~~~~~v~epn~~~l~~~i~~~i~~~L~~l~~~gal~ 604 (663) T protein:vir:10 525 PVTGFAGGDGFVLFGDKMATQVPSPFDRINVRRLFNMLKKNIGDTSKYELFENNDAFTRQSFRMETSQYLDGIRSLGGCY 604 (663) T ss_pred EEEEEeCCCcEEEEcccccCCCCcccceEehhhHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCcee Confidence 99997 3 699999999997777899999999999999999999999999999999999999999999999999999999 Q ss_pred eEEEEEcCC-CCHHHhhCCEEEEEEEEEecCCceEEEEEEEEeeceeecC Q lcl|Aclame:pro 694 DYEVAIDSV-TTPTDIDNNTLRARVTVQPARSIEYIDITFVITPTGVEIT 742 (742) Q Consensus 694 Gf~V~~Det-Ntp~dI~~GrL~i~I~vaP~~PAEfI~l~f~it~tG~~fs 742 (742) ||+|+||++ |++++|++|+|+++|+++|++|+|||+|+|.++++|++|+ T Consensus 605 g~~v~~d~~~nt~~~i~~G~~~~~i~~~p~~pae~i~~~~~~~~~~~~~~ 654 (663) T protein:vir:10 605 DFRVVCDTTNNTPNVIDRNEFVGTIYVKPPRSINYITLNMVATSTGANFD 654 (663) T ss_pred eeEEEEcCCCCCHHHhhCCeEEEEEEEEecCCcceEEEEEEEeecCccHH Confidence 999999965 8889999999999999999999999999999999999999 No 16 >protein:vir:79092 Length: 477 # NCBI annotation: gp13, phage tail sheath protein # Family: family:all:115 # MgeID: mge:1862 # MgeName: phiE255 # Cross-refs: genbank:acc:YP_001111213;genbank:gi:134288804;genbank:GeneID:4960766 Probab=100.00 E-value=3.3e-75 Score=428.94 Aligned_cols=439 Identities=15% Similarity=0.099 Sum_probs=283.1 Q ss_pred eeecccCCceeccceeEEEEEeeccCCCCCccceeeeeeecCCCCCeeeecccCceEEEEcCceEEecccccCCcceEEE Q lcl|Aclame:pro 238 ITVNREKGQVLYPSFDVVVHFRDIRGVSANTEYIRFRQVNLNPESPNYIERVIGNMTFEFDGERIVTGGEYPNQVPFLRV 317 (742) Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vtG~~~~n~~p~L~~ 317 (742) ....-|||-|+=|. ++++--| ..+++.+.-+||-.. . | ++| .|.+.. T Consensus 1 M~~~~~pGVyv~E~-------------~~g~~~I--------~~v~Tsv~~~VG~a~---~------~--p~n-~pv~it 47 (477) T protein:vir:79 1 MAANYLHGVETIEK-------------ETGSRPV--------KVVKSAVIGLIGTAP---I------G--PVN-TPVQSL 47 (477) T ss_pred CcCCCCCCeEEEEe-------------cCCcccc--------cccCCceEEEEeecc---c------C--CCc-ccEEEc Confidence 33344666554322 2222222 122333444454321 1 2 445 366777 Q ss_pred EeccccccccccchhhhhhhhhhheecccceEEEEEEEEEeeeccccccccchhhheee---eecccccceeeeeecccc Q lcl|Aclame:pro 318 VVSQDIKQNVAGVEKWVPVGFEGIYSVGDFTVIVNELTNVSIPVTDSAIIPPMRFTRIE---QITLSGGASFSVISNQPY 394 (742) Q Consensus 318 si~~~~~~~~ag~s~~ip~al~aI~avg~~tv~v~~itnv~~p~tdsa~vp~~~~~li~---~~~l~~ga~~~vl~~~~~ 394 (742) ++.+.....+.+....++.++.++|++|...+.+. .+..|.++............. .....+.....+. T Consensus 48 s~~d~~~~g~~~~~~tL~~Av~~~f~ngg~~~~vv---rV~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~----- 119 (477) T protein:vir:79 48 SDVDAAQFGPQLAGFTIPQALDAVYDYGSGTVIVI---NVLDPAVHKSNAASESVTFDAATGRAKLAHPAAANLV----- 119 (477) T ss_pred cHHHHHHhcCCCCCCcHHHHHHHHhhcCCceEEEE---eccCCccccccccccccccccccccccccccccceeE----- Confidence 77776555666777889999999999988877764 344555444322111000000 0000000000000 Q ss_pred cccccccccceeeeccCCcceeeecccccccccccceeEeeccccccccccee--eeccCCcceEEEecCCccccccccc Q lcl|Aclame:pro 395 GFNIQDSRHSYWLSPFKDDELIIGTELVLPALDVSTEFGVSSWEEALPEFSFL--MPFQGGSDGYIRVDENEPDTIGRVK 472 (742) Q Consensus 395 ~~~i~~s~~~~~Ls~l~d~s~~v~td~~a~a~d~s~~v~l~~~~~~~p~a~~a--v~l~gGtdg~i~vd~~~~~~ig~~~ 472 (742) +............................. ...+..... .....+... .....+..+.. T Consensus 120 ------------v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~----~~~~~~~~g~~- 180 (477) T protein:vir:79 120 ------------LKNDSGGTTYTEGTDYAVDLINGVITRIKT--GTIPAAATAAKATYDYADPT----KVTAADIIGAV- 180 (477) T ss_pred ------------EeecccccccccCccccccccchhhhhhhc--cccccccceeeceeccCCcc----cceeeeecccc- Confidence 000000000000000000000000000000 000000000 000000000 00001111111 Q ss_pred cccccccchhhHHHhhccCC-----ccEEEEcCCCc-hHHHHHHHHHHHhhcCceEEEEECCCCCChHHHHHHHHh---- Q lcl|Aclame:pro 473 ITPALLANYERLLPLLTEDQ-----FDLVLTPYLTF-ADHAGTVNAFINRAENRFLYLFDIAGDDDTENLAISLAG---- 542 (742) Q Consensus 473 ~~~~~~a~rtGL~AL~~~d~-----v~LL~aPg~t~-s~v~aal~Al~a~a~~R~~aI~D~p~~~~t~~~A~a~r~---- 542 (742) ...+.++|+++|+..+. +.++.+||+++ ..+.+++.++|+.+ ++++++|+|.+.+. +.+.++++ T Consensus 181 ---~a~~~~tg~~al~~~~~~~~~~~~iv~apg~~~~~~v~~~l~~~~~~~--~~~a~~d~p~~~~~-~~~~~~~~~~~~ 254 (477) T protein:vir:79 181 ---NAAGMRTGMKALKDTYNLYGYFSKILIAPAYCTQNSVSVELEAMAVQL--GAIAYIDAPIGTTL-AQALAGRGPAGT 254 (477) T ss_pred ---cccccchhhhhhhhhhhhcccccceeeccccccchhHHHHHHHHHhhc--CeEEEEecCCCCCh-HHHhhhhhhccc Confidence 12345778888877654 36889999864 45778888888764 56788899876543 34455544 Q ss_pred ---ccCCcEEEEEecceeeccc--cceeEechHHHHHHHHhhhccCceeecCCceeeEeeecc----------ccchhHH Q lcl|Aclame:pro 543 ---YINSSFATTFFPWVRRLTN--KGMRTVPASLAAYRSIRTTDPETGLAPVGARRGVVTGEP----------VRQVDWE 607 (742) Q Consensus 543 ---~~~S~~aaL~~PwVkv~d~--~~~~~vPpSgavAGl~ArtD~e~Gv~~SPaN~~I~~~~~----------ls~sE~d 607 (742) +++|+|++++|||+++.++ +..+++|||+++||++||+|.++|+|+||+|+.+.+... ..++|++ T Consensus 255 ~~~~~~s~~~~~~~p~~~~~~~~~~~~~~~p~s~~~ag~~a~~d~~~g~~~span~~~~gv~~~~~~~~~~~~~~~~~~~ 334 (477) T protein:vir:79 255 INFNTSSDRVRLCYPHVKVYDIATNAERLEPLSSRAAGLRARVDLDKGYWWSSSNQQLVGVTGVERPLSAMIDDPQSDVN 334 (477) T ss_pred cccccccceEEEEcCeeEEecccCCceeeechHHHHHHHHHHhhccCCceEccCCceeecceecccccccccCCChhhHH Confidence 4789999999999998874 456789999999999999999999999999987754432 2457899 Q ss_pred hhhcCCceEEEEc-CCCEEEEcceecC--CCccccceeehhhhhHHHHHHHHHHHHHhhcccCCHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 608 DLYNNRINPIVRV-GNDVLLFGQKTML--NVNSALNRINVRRLLIVMRNRISQILSSYLFENNTSENRLRAEALVRQYLE 684 (742) Q Consensus 608 ~LN~~GINtI~~f-g~G~rlWGnRTla--s~D~~wrfInVRR~~d~Ie~sI~~a~~~~VfEPNd~~l~~~V~~sInafL~ 684 (742) .||++|||||++| ++|+++||+||++ ++++.|+|+++||++++|+++|++.++|+|||||++.+|++|+++|++||+ T Consensus 335 ~L~~~~i~~i~~~~~~G~~~wG~rT~~~~~~~~~~~~i~vrR~~~~i~~~~~~~~~~~v~e~~~~~~~~~i~~~i~~~l~ 414 (477) T protein:vir:79 335 MLNEQGITTVFSSYGSGLRLWGNRTAAWPTVTHMRNFENVRRTGDVINESLRYFSQQFVDAPIDQGLIDSLVESVNGFGR 414 (477) T ss_pred HHhhCCceEEEEecCCcEEEEcccccCCCCCCccceeeehhhHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHH Confidence 9999999999998 6799999999995 567889999999999999999999999999999999999999999999999 Q ss_pred HHHhCCceeeEEEEEcC-CCCHHHhhCCEEEEEEEEEecCCceEEEEEEEEeeceeecC Q lcl|Aclame:pro 685 SLRLRGAVTDYEVAIDS-VTTPTDIDNNTLRARVTVQPARSIEYIDITFVITPTGVEIT 742 (742) Q Consensus 685 ~L~~~GAL~Gf~V~~De-tNtp~dI~~GrL~i~I~vaP~~PAEfI~l~f~it~tG~~fs 742 (742) +||++|+|+||+|+||+ +|+++||++|+|+++|+++|++|+|||+|++.++..+.+-- T Consensus 415 ~l~~~g~l~g~~v~~~~~~nt~~~i~~G~~~~~i~~~p~~p~e~i~~~~~~~~~~~~~~ 473 (477) T protein:vir:79 415 KLIGDGALLGFKAWFDPARNPKEELAAGHLLINYKYTVPPPLERLTYETEITSEYLLTL 473 (477) T ss_pred HHHhCCceeeeEEEEecCCCCHHHhhCCeEEEEEEEEecCCceeEEEEEEEechHHhhh Confidence 99999999999999996 58899999999999999999999999999999988775433 No 17 >protein:vir:104477 Length: 749 # NCBI annotation: gp18 # Family: family:all:661 # MgeID: mge:1548 # MgeName: P-SSM4 # Cross-refs: genbank:acc:YP_214663;genbank:gi:61806304;genbank:GeneID:3294532 Probab=100.00 E-value=9.8e-72 Score=409.88 Aligned_cols=654 Identities=19% Similarity=0.220 Sum_probs=302.7 Q ss_pred Ce---eeeeeeeeeEecc-ccCCchhhheeeeecCCCCcccceeec-hhHHhh-ccc-ceee-----eehhhhcCcceEE Q lcl|Aclame:pro 1 MY---RVNVKEVDLSITP-EVGTPVQTALVGAFDLPIPSELPVSVT-PDEFRR-VGS-TELS-----LIADSLVGGQEVT 68 (742) Q Consensus 1 ~~---~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~-~~~~-----~~~~~~~~~~~~~ 68 (742) -| -|-|+|+|++-+. +++| --.++||-|.-= |-..|+-|| ..||+| .|+ ++-+ ..+.-+-||...- T Consensus 4 ~~~~PgVyv~e~~~~~~~~~~~t-~~~~fvG~~~~G-p~~~p~~v~s~~~~~~~fG~~~~~~~~~~~v~~~F~ngg~~~~ 81 (749) T protein:vir:10 4 NQSSPGVVIQERDLTTVSTIPTA-NVGVIAAPFTKG-PVEEVIEITSERQLAEKFGEPNESNYEYWFSAAQFLSYGGLLK 81 (749) T ss_pred cccCCeeEEEEecCCcccccccC-ceeEEEeccCCC-CCccCEEcCCHHHHHHHcCCccCCcccHHHHHHHHhhcCCeEE Confidence 12 3778999986443 2344 356788887743 446787776 456655 454 2222 2234467999999 Q ss_pred EEccCCcccccceeE----EEEec---ceee-ehhhheeeeeeeecccCCCcccceeEEEEEccCCCeeEEEeeecCCCc Q lcl|Aclame:pro 69 VIRPRGETQSLNAAF----VVVGG---YNVT-LGAFNVFYLMFLGYDPQKGYTDVSYVDVQLAGTPTDTILFSYSLDGSS 140 (742) Q Consensus 69 ~~~~~~~~~~~~~~~----~~~~~---~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (742) |+|--++. ..|+.- +.++. |.-+ .++-+.+ -+-.-+|. -.++ -+.|++.....+.+..-+.. +.+ T Consensus 82 vvRv~~~~-~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~a~~pG-~~gn--~l~v~v~~~~~~~~~~~~~~-~~~ 154 (749) T protein:vir:10 82 TIRVNSSS-LKNAVDTGTAPLVKNLQDYETSIEDASNNF--SWVARTPG-DTGN--SIGIFVTDAGADQVVVVPAP-GSG 154 (749) T ss_pred EEEccCcc-ccccccccccccccccccccccccccccce--EEEeccCC-CcCC--ceEEEEEcCCCceeeeeecC-Ccc Confidence 99976654 222211 00000 0000 0111211 11112221 1233 23344443333433332222 222 Q ss_pred ceeEEEEE------------eeceeE--e---ecccce---------------eeeeeeccccceEEEEeecC-cccc-E Q lcl|Aclame:pro 141 TTHSLTIN------------LNAPSV--T---LPSNIV---------------PLFFYYEPYTGSITLQSSVN-YSGL-T 186 (742) Q Consensus 141 ~~~~~~~~------------~~~~~~--~---~~~~~~---------------~~~~~~~~~~~~~~~~~~~~-~~~~-~ 186 (742) .-|.+++- ++..+. + +.+.+. ...+..++.+..+.+....+ ..+. . T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~a~~~~~~~~~~~~~~~~~~s~~~~~~~a 234 (749) T protein:vir:10 155 NEHEFVADAAVSAASGAAGKVFKYSIILTIDDVVGTFAPGSATTITIGGSAESVNVLAYDATNKKLEIGLPSGGVTGILA 234 (749) T ss_pred ceeeEEeeecccccccccccccccceeeeeccccceeecccceeeeccCcccccccccccCCcceEEEeeecccccceee Confidence 23333331 111111 0 011111 11122233333332222111 0000 0 Q ss_pred EEEeecCCCcceEeecccCCCcceeeeeecccccccccCcccceeeEEEeeeeecccCCceeccceeEEEEEeeccCCCC Q lcl|Aclame:pro 187 LNYTVSKATTPWVYFAEYGTPTSSLTLYKGFYLEGIDLNSFNKQFVVSIENITVNREKGQVLYPSFDVVVHFRDIRGVSA 266 (742) Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (742) ...++-... +-. -....+....+.. .|+....|..+--. -..-..+..+. .|.-..+-+.... T Consensus 235 ~~~~v~~~~-~~~----~~~~~i~~~~~~~-------~~~~~~~~a~~~~~--~~~~g~~~~it---~v~~~~~~~~~~t 297 (749) T protein:vir:10 235 DNQVITQGT-NTA----KINVTIERKLLVA-------LNKSSIEFAASDVV--QDTNSTNITIT---SVRDEYTEREYLP 297 (749) T ss_pred eeecccccc-ccc----ccccccccchhhh-------hccccceeeccccc--cCCccceeEEE---eeecccccccccc Confidence 011100000 000 0000000011111 12222222221000 00000000000 0000000000000 Q ss_pred CccceeeeeeecCCCCCeeeecccCce---EEE-EcCceEEecccccCCc--ceEEEEeccccccccccchhhhhhhhhh Q lcl|Aclame:pro 267 NTEYIRFRQVNLNPESPNYIERVIGNM---TFE-FDGERIVTGGEYPNQV--PFLRVVVSQDIKQNVAGVEKWVPVGFEG 340 (742) Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-~~g~~~vtG~~~~n~~--p~L~~si~~~~~~~~ag~s~~ip~al~a 340 (742) + ....++.-.|..+.+....-+.. ++. .+..-.++|. ++-+ ....++.+.+. ....+..... .. T Consensus 298 ~---~~~~~~a~~~gt~~~~~~~~g~~D~~~v~v~~~~g~~~~~--~g~v~e~~~~~~~~~~~-~~~~~~~~~~----~~ 367 (749) T protein:vir:10 298 G---VKWINVAPRPGTSLYANGVGGHRDEMHVILVDIDGGVTGT--VGALLERYIDVSKASDA-KTSVGETNYY----AE 367 (749) T ss_pred c---eeeccccccccceeeeecccCCCCceEEEEecCCCeeeec--ccceeeeeeeccccccc-cccccccchh----hh Confidence 0 00111111111111111110000 000 0000000110 0000 00000000000 0000000000 00 Q ss_pred heecccceEEEEEEEEEeeeccccccccchhhheeeeecccccceeeeeecccccccccccccceeeeccCCcceeeecc Q lcl|Aclame:pro 341 IYSVGDFTVIVNELTNVSIPVTDSAIIPPMRFTRIEQITLSGGASFSVISNQPYGFNIQDSRHSYWLSPFKDDELIIGTE 420 (742) Q Consensus 341 I~avg~~tv~v~~itnv~~p~tdsa~vp~~~~~li~~~~l~~ga~~~vl~~~~~~~~i~~s~~~~~Ls~l~d~s~~v~td 420 (742) +.+.....+.+ ...+.. ..... ... .+.... ........ . T Consensus 368 ~~~~~s~~v~~-----~~~~~~----~~~~~------~~~---------~~~~~~----~~~~~~~~------------~ 407 (749) T protein:vir:10 368 VIKQKSEFIYW-----AEHEST----LYAAT------SSA---------SDGLFG----QTAANRQF------------N 407 (749) T ss_pred hhccCCCEEEE-----Eecccc----ccccc------ccc---------cccccc----ccccccee------------e Confidence 00000000000 000000 00000 000 000000 00000000 0 Q ss_pred cccccccccceeEeecccccccccceeeeccCCcceEEEecCCccccccccccccccccc-hhhHHHhhcc--CCccEEE Q lcl|Aclame:pro 421 LVLPALDVSTEFGVSSWEEALPEFSFLMPFQGGSDGYIRVDENEPDTIGRVKITPALLAN-YERLLPLLTE--DQFDLVL 497 (742) Q Consensus 421 ~~a~a~d~s~~v~l~~~~~~~p~a~~av~l~gGtdg~i~vd~~~~~~ig~~~~~~~~~a~-rtGL~AL~~~--d~v~LL~ 497 (742) .....................+.......+.+|.|+...... ......+ ..++.++... ..+++++ T Consensus 408 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gg~d~~~~~~~-----------~~~~~~~~~~~~~~l~~~~~~~~~~li 476 (749) T protein:vir:10 408 LFRSAAGSVDYPAGVTTLGSKNNATYYYRLSGGVNYTVSAGQ-----------YTITNTDIGSAYELIGDPESQIVDFII 476 (749) T ss_pred ccccccccceeccccccccccCCcEEEEEccCCccccccccc-----------ccccchhHHHHHHHhhhhhhcccceEE Confidence 000000000000000000000111122223333332211100 0011122 2334444322 2345544 Q ss_pred E--cCCCchHHHH---HHHHHHHhhcCceEEEEECCCCCC--------hHHHHHHH-HhccCCcEEEEEecceeeccc-- Q lcl|Aclame:pro 498 T--PYLTFADHAG---TVNAFINRAENRFLYLFDIAGDDD--------TENLAISL-AGYINSSFATTFFPWVRRLTN-- 561 (742) Q Consensus 498 a--Pg~t~s~v~a---al~Al~a~a~~R~~aI~D~p~~~~--------t~~~A~a~-r~~~~S~~aaL~~PwVkv~d~-- 561 (742) + |+.++.+..+ ++.++|+.+++ +++++|+|.+.. ....+..+ ++.++|+|+++||||+++.|+ T Consensus 477 ~~~~~~~~~~~~~v~~al~~~~~~~~~-~~~~~d~p~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~p~~~~~d~~~ 555 (749) T protein:vir:10 477 SGPSGTSDANALAKITSLVNIAEERRD-CMVFVSPRRGNVIGISNTTTITTNIVDFFKKLPSSSYMVFDSGYKYIYDKYN 555 (749) T ss_pred EecCCCCcchhHHHHHHHHHHHhhcCC-EEEEEcCCCCcccccccchhhhhHHHHHHhhccCceeEEEEccceeeecccc Confidence 3 4555555444 44555554433 456777765421 12233344 455678999999999999875 Q ss_pred cceeEechHHHHHHHHhhhccCceeecCCceeeE---eee----ccccchhHHhhhcCCceEEEEc-CCCEEEEcceecC Q lcl|Aclame:pro 562 KGMRTVPASLAAYRSIRTTDPETGLAPVGARRGV---VTG----EPVRQVDWEDLYNNRINPIVRV-GNDVLLFGQKTML 633 (742) Q Consensus 562 ~~~~~vPpSgavAGl~ArtD~e~Gv~~SPaN~~I---~~~----~~ls~sE~d~LN~~GINtI~~f-g~G~rlWGnRTla 633 (742) +..+++|||+++||++||+|.++|+|+||+|+.+ .+. ..+++.|++.||++|||||++| ++|+++||+||++ T Consensus 556 ~~~~~~p~s~~vAGl~Ar~D~~~g~~~SPan~~~~~i~g~~~~~~~~~~~e~~~Ln~~gIn~i~~~~g~G~~~wG~rT~~ 635 (749) T protein:vir:10 556 DVYRYIPCNGDTAGLCLQTNEISEPWFSPAGFQRGVLRNAIKLAYTPNKAQRDQLYANRVNPIVSFPGQGVVLYGDKTAL 635 (749) T ss_pred CceEEechHHHHHHHHHHhhccCCcEECcCCceeeeeeccccceeecChhHHHhhhhCCceEEEEecCCeEEEEcceecC Confidence 5567999999999999999999999999999743 332 3467899999999999999998 6899999999998 Q ss_pred CCccccceeehhhhhHHHHHHHHHHHHHhhcccCCHHHHHHHHHHHHHHHHHHHhCCceeeEEEEEcCC-CCHHHhhCCE Q lcl|Aclame:pro 634 NVNSALNRINVRRLLIVMRNRISQILSSYLFENNTSENRLRAEALVRQYLESLRLRGAVTDYEVAIDSV-TTPTDIDNNT 712 (742) Q Consensus 634 s~D~~wrfInVRR~~d~Ie~sI~~a~~~~VfEPNd~~l~~~V~~sInafL~~L~~~GAL~Gf~V~~Det-Ntp~dI~~Gr 712 (742) +.|++|+||||||||+||+++|++.++|+||||||+.+|++|+++|++||++||++|+|.||+|+||++ |++++|++|+ T Consensus 636 s~d~~~~~i~vRRl~~~ie~si~~~~~~~v~epn~~~l~~~i~~~i~~fL~~l~~~G~i~~f~V~~d~~~Nt~~~i~~G~ 715 (749) T protein:vir:10 636 GFASAFDRINIRRLFLTVERVISTAAKAQLFEQNDEAQRSLFINIVEPYLRDVQGRRGVVDFLVKCDSTNNTPEAVDRGE 715 (749) T ss_pred CCCcccceeehhhhHHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCeeeeEEEEcCCCCCHHHhhCCE Confidence 889999999999999999999999999999999999999999999999999999999999999999965 7889999999 Q ss_pred EEEEEEEEecCCceEEEEEEEEeeceeecC Q lcl|Aclame:pro 713 LRARVTVQPARSIEYIDITFVITPTGVEIT 742 (742) Q Consensus 713 L~i~I~vaP~~PAEfI~l~f~it~tG~~fs 742 (742) |+++|+++|++|||||+|+|.++++|++|. T Consensus 716 ~~~~i~~~P~~pae~I~~~~~~~~~~~~~~ 745 (749) T protein:vir:10 716 FYAEVFLKPTRTINYVQLTFVATRTGVSFA 745 (749) T ss_pred EEEEEEEEecCCccEEEEEEEEeecCcchH Confidence 999999999999999999999999999999 No 18 >protein:vir:107865 Length: 477 # NCBI annotation: gp39 # Family: family:all:115 # MgeID: mge:1565 # MgeName: BcepMu # Cross-refs: genbank:acc:YP_024712;genbank:gi:48696949;genbank:GeneID:2845953 Probab=100.00 E-value=1.1e-74 Score=425.99 Aligned_cols=442 Identities=14% Similarity=0.086 Sum_probs=279.9 Q ss_pred eeecccCCceeccceeEEEEEeeccCCCCCccceeeeeeecCCCCCeeeecccCceEEEEcCceEEecccccCCcceEEE Q lcl|Aclame:pro 238 ITVNREKGQVLYPSFDVVVHFRDIRGVSANTEYIRFRQVNLNPESPNYIERVIGNMTFEFDGERIVTGGEYPNQVPFLRV 317 (742) Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vtG~~~~n~~p~L~~ 317 (742) ....-+||-|+=|.- ++.-.| ..+++.+.-+||-.. + | ++| .|.+.. T Consensus 1 M~~~~~pGVyv~E~~-------------~~~~~i--------~~v~T~v~~~VG~a~------~---g--p~n-~pv~it 47 (477) T protein:vir:10 1 MAANYLHGVETIEKE-------------TGSRPV--------KVVKSAVIGLIGTAP------I---G--PVN-TPVQSL 47 (477) T ss_pred CcccCCCCeEEEEcc-------------CCcccc--------cccCCceeEEEeccc------C---C--CCC-cCEEEc Confidence 333344454432211 111111 111222333343111 1 2 344 377878 Q ss_pred EeccccccccccchhhhhhhhhhheecccceEEEEEEEEEeeeccccccccchhhheeeeecccccceeeeeeccccccc Q lcl|Aclame:pro 318 VVSQDIKQNVAGVEKWVPVGFEGIYSVGDFTVIVNELTNVSIPVTDSAIIPPMRFTRIEQITLSGGASFSVISNQPYGFN 397 (742) Q Consensus 318 si~~~~~~~~ag~s~~ip~al~aI~avg~~tv~v~~itnv~~p~tdsa~vp~~~~~li~~~~l~~ga~~~vl~~~~~~~~ 397 (742) ++.+.....+......++.++.++|+.|...+.+. ++..+.++...+..... ......+. ....... T Consensus 48 s~~d~~~~g~~~~~~tL~~Av~~~f~nGg~~~~vV---rV~~~~~~~~~~~~~~~----~~~~~~~~-~~~~~~~----- 114 (477) T protein:vir:10 48 SDVDAAQFGPQLAGFTIPQALDAVYDYGSGTVIVI---NVLDPAVHKSNAANEPV----TFDAATGR-AKLAHPA----- 114 (477) T ss_pred cHHHHHHhccCCCCCcHHHHHHHHHhccceEEEEE---ecCcccccccccccccc----ccccccce-ecccccc----- Confidence 88776555566667789999999999988777653 33444433332211100 00000000 0000000 Q ss_pred ccccccceeeeccCCcceeeecccccccccccceeEeecccccccccceeeeccCCcceEEEecCCccccccccccc--c Q lcl|Aclame:pro 398 IQDSRHSYWLSPFKDDELIIGTELVLPALDVSTEFGVSSWEEALPEFSFLMPFQGGSDGYIRVDENEPDTIGRVKIT--P 475 (742) Q Consensus 398 i~~s~~~~~Ls~l~d~s~~v~td~~a~a~d~s~~v~l~~~~~~~p~a~~av~l~gGtdg~i~vd~~~~~~ig~~~~~--~ 475 (742) .....+........................-........ .+........+...+......... . T Consensus 115 ----~~~~~v~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~g~~ 180 (477) T protein:vir:10 115 ----AANLVLKNDSGGTTYAEGTDYAVDLINGVITRIKTGTIP----------PGATAAKATYDYADPTKVTAADIIGAV 180 (477) T ss_pred ----cccccccccccccccccchhhhhhhccccceeccccccc----------ccceeeeeccccccccccccccccccc Confidence 000000000000000000000000000000000000000 000000001111111111111111 1 Q ss_pred ccccchhhHHHhhccCC-----ccEEEEcCCCc-hHHHHHHHHHHHhhcCceEEEEECCCCCChHHHHHHHHh------- Q lcl|Aclame:pro 476 ALLANYERLLPLLTEDQ-----FDLVLTPYLTF-ADHAGTVNAFINRAENRFLYLFDIAGDDDTENLAISLAG------- 542 (742) Q Consensus 476 ~~~a~rtGL~AL~~~d~-----v~LL~aPg~t~-s~v~aal~Al~a~a~~R~~aI~D~p~~~~t~~~A~a~r~------- 542 (742) ...+.++|+++|+.... ..++++||++. ..+++++.++|+.+ |+++++|+|.+.+ .+.+.+|+. T Consensus 181 ~~~~~~tGl~al~~~~~~~~~~~~~l~apg~~~~~~v~~~l~~~~~~~--~~~~~~d~p~~~~-~~~~~~~~~~~~~~~~ 257 (477) T protein:vir:10 181 NAAGMRTGMKALKDTYNLYGYFSKILIAPAYCTQNSVSVELEAMAVQL--GAIAYIDAPIGTT-LAQALAGRGPAGTINF 257 (477) T ss_pred cccchhhhhhhhhhhhhhcchhcccccccccccchhhHHHHHHHHhhC--CEEEEEecCCCCC-HHHHHhhhhhcccccc Confidence 12456789999987653 26888999865 55777888888754 5678889987654 344566654 Q ss_pred ccCCcEEEEEecceeeccc--cceeEechHHHHHHHHhhhccCceeecCCceeeEeeecc----------ccchhHHhhh Q lcl|Aclame:pro 543 YINSSFATTFFPWVRRLTN--KGMRTVPASLAAYRSIRTTDPETGLAPVGARRGVVTGEP----------VRQVDWEDLY 610 (742) Q Consensus 543 ~~~S~~aaL~~PwVkv~d~--~~~~~vPpSgavAGl~ArtD~e~Gv~~SPaN~~I~~~~~----------ls~sE~d~LN 610 (742) +++|+|++++|||++..++ +..+++|||+++||++||+|.++|+|+||+|+.+.+... ..+.|++.|| T Consensus 258 ~~~s~~~~~~~p~~~~~d~~~~~~~~~p~s~~~ag~~a~~d~~~g~~~span~~~~gi~~~~~~~~~~~~~~~~~~~~L~ 337 (477) T protein:vir:10 258 NTSSDRVRLCYPHVKVYDTATNAERLEPLSSRAAGLRARVDLDKGYWWSSSNQQLVGVTGVERPLSAMIDDPQSDVNMLN 337 (477) T ss_pred ccccceEEEEcCeEEEecccCCceeEEchHHHHHHHHHHhhhcCCceeccCCceeccccccccccccccCCChhhHHHHh Confidence 5789999999999998774 456789999999999999999999999999987654332 2457899999 Q ss_pred cCCceEEEEc-CCCEEEEcceecC--CCccccceeehhhhhHHHHHHHHHHHHHhhcccCCHHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 611 NNRINPIVRV-GNDVLLFGQKTML--NVNSALNRINVRRLLIVMRNRISQILSSYLFENNTSENRLRAEALVRQYLESLR 687 (742) Q Consensus 611 ~~GINtI~~f-g~G~rlWGnRTla--s~D~~wrfInVRR~~d~Ie~sI~~a~~~~VfEPNd~~l~~~V~~sInafL~~L~ 687 (742) ++|||+|++| ++|+++||+||++ ++|+.|+|+++||+++||+++|++.++|+||||||+.+|++++++|++||++|| T Consensus 338 ~~gi~~i~~~~~~G~~~wG~rT~~~~~~~~~~~~~~vrR~~~~i~~~~~~~~~~~v~~~~~~~~~~~i~~~i~~~l~~l~ 417 (477) T protein:vir:10 338 EQGITTVFSSYGSGLRLWGNRTAAWPTVTHMRNFENVRRTGDVINESLRYFSQQFVDAPIDQGLIDSLVESVNGFGRKLI 417 (477) T ss_pred hCCceEEEEecCCcEEEEcccccCCCCCCcccceeehhhHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH Confidence 9999999998 6899999999995 567889999999999999999999999999999999999999999999999999 Q ss_pred hCCceeeEEEEEcCC-CCHHHhhCCEEEEEEEEEecCCceEEEEEEEEeeceeecC Q lcl|Aclame:pro 688 LRGAVTDYEVAIDSV-TTPTDIDNNTLRARVTVQPARSIEYIDITFVITPTGVEIT 742 (742) Q Consensus 688 ~~GAL~Gf~V~~Det-Ntp~dI~~GrL~i~I~vaP~~PAEfI~l~f~it~tG~~fs 742 (742) ++|+|.||+|+||++ |+++||++|+|+++|+++|++|||||+|++.+...+.+-- T Consensus 418 ~~g~l~g~~v~~~~~~nt~~~i~~G~~~~~i~~~p~~p~e~i~~~~~~~~~~~~~~ 473 (477) T protein:vir:10 418 GDGALLGFKAWFDPARNPKEELAAGHLLINYKYTVPPPLERLTYETEITSEYLLTL 473 (477) T ss_pred hCCceeeeEEEEecCCCCHHHhhCCeEEEEEEEEecCCcceEEEEEEEcchHHhhh Confidence 999999999999965 8889999999999999999999999999999877764432 No 19 >protein:vir:98553 Length: 395 # NCBI annotation: gp21 # Family: family:all:115 # MgeID: mge:1533 # MgeName: PSP3 # Cross-refs: genbank:acc:NP_958076;genbank:gi:41057373;genbank:GeneID:2744224 Probab=100.00 E-value=6.4e-75 Score=427.33 Aligned_cols=361 Identities=13% Similarity=0.070 Sum_probs=243.2 Q ss_pred hhhheecccceEEEEEEEEEeeecccc-ccccchhhheeeeecccccceeeeeecccccccccccccceeeeccCCccee Q lcl|Aclame:pro 338 FEGIYSVGDFTVIVNELTNVSIPVTDS-AIIPPMRFTRIEQITLSGGASFSVISNQPYGFNIQDSRHSYWLSPFKDDELI 416 (742) Q Consensus 338 l~aI~avg~~tv~v~~itnv~~p~tds-a~vp~~~~~li~~~~l~~ga~~~vl~~~~~~~~i~~s~~~~~Ls~l~d~s~~ 416 (742) +.. |-+|. .+.++.....|+..- ..++. .+.......+..+++ ..+..++...+-... T Consensus 1 m~~-~~~GV---~v~e~~~g~~~v~~v~tav~~----~vgta~~~~~~~~p~-------------~~pv~v~s~~~~~~~ 59 (395) T protein:vir:98 1 MSD-FHHGT---QVIEINDGTRVISTVATAVVG----MVCTASDADATLFPL-------------NEPVLITNVQSAIAK 59 (395) T ss_pred CCC-CCCCe---EEEEcCCCcccccccCcceEE----EEeeccCCCcccccc-------------ccceEeechHHhHhh Confidence 111 12322 111110000000000 00000 000000111111100 000000000000000 Q ss_pred eecccccccccccceeEeecccccccccceeeeccCCcceEEE-ec------CCcccccccc--ccccccccchhhHHHh Q lcl|Aclame:pro 417 IGTELVLPALDVSTEFGVSSWEEALPEFSFLMPFQGGSDGYIR-VD------ENEPDTIGRV--KITPALLANYERLLPL 487 (742) Q Consensus 417 v~td~~a~a~d~s~~v~l~~~~~~~p~a~~av~l~gGtdg~i~-vd------~~~~~~ig~~--~~~~~~~a~rtGL~AL 487 (742) .+ ....+..+.......++....+. +. .......... .......+.++|+++| T Consensus 60 ~g------------------~~~tl~~al~~~~~~~~~~~~vv~~~~~~~~~~~~~~a~~~~~i~g~~~~~~~~Tgl~al 121 (395) T protein:vir:98 60 AG------------------KKGTLAASLQAIADQSKPVTVVVRVEDGTGDDEEAALAQTVSNIIGGTDENGKYTGIKAL 121 (395) T ss_pred cc------------------cccchhhHHHHHhhccCceEEEeeccccccccccccccccccccccccccccchhHHHHH Confidence 00 00011111001111111111000 00 0000000000 1111224578999999 Q ss_pred hccCC-----ccEEEEcCCCchHHHHHHHHHHHhhcCceEEEEECCCCCChHHHHHHHHhccCCcEEEEEecceeeccc- Q lcl|Aclame:pro 488 LTEDQ-----FDLVLTPYLTFADHAGTVNAFINRAENRFLYLFDIAGDDDTENLAISLAGYINSSFATTFFPWVRRLTN- 561 (742) Q Consensus 488 ~~~d~-----v~LL~aPg~t~s~v~aal~Al~a~a~~R~~aI~D~p~~~~t~~~A~a~r~~~~S~~aaL~~PwVkv~d~- 561 (742) ++... +.++++||+++..++.++.++|+.+ ++++++|+|.+. +.+.+.+|+++++|+|+++||||+++.++ T Consensus 122 ~~~~~~~~~~p~il~ap~~~~~~v~~al~~~~~~~--~~~~~~d~p~~~-t~~~a~~~~~~~~s~~~~~~~p~~~~~d~~ 198 (395) T protein:vir:98 122 LTAQAVTGVKPRILGVPGLDTKEVAVALASAAIKL--RAFAYVSAWGCK-TISEAMEYRKNFSQRELMVIWPDFLAWDTV 198 (395) T ss_pred hhhhhhhccchhhcccccccccHHHHHHHHHhhhc--CcEEEEEcCCCC-CHHHHHHHHhccCCceEEEEecceeEeccc Confidence 87653 4689999999988888888888765 456788888764 45668899999999999999999998875 Q ss_pred -cceeEechHHHHHHHHhhhccCceeecCCceeeEeeec----------cccchhHHhhhcCCceEEEEcCCCEEEEcce Q lcl|Aclame:pro 562 -KGMRTVPASLAAYRSIRTTDPETGLAPVGARRGVVTGE----------PVRQVDWEDLYNNRINPIVRVGNDVLLFGQK 630 (742) Q Consensus 562 -~~~~~vPpSgavAGl~ArtD~e~Gv~~SPaN~~I~~~~----------~ls~sE~d~LN~~GINtI~~fg~G~rlWGnR 630 (742) +..+++|||+++||++||+|.++|+|+||+|+.+.+.. ...++|++.||++|||++++ ++||++||+| T Consensus 199 ~~~~~~~p~s~~~AG~~a~~d~~~g~~~spaN~~i~gi~~~~~~~~~~~~~~~~~~~~Ln~~gI~~~~~-~~G~~~wG~r 277 (395) T protein:vir:98 199 KNTTATAYATARALGLRAYIDQTVGWHKTLSNVGVQGVTGISASVFWDLQASGTDADLLNEAGVTTLVR-KDGFRFWGNR 277 (395) T ss_pred CCceeeechHHHHHHHHHHhhcccCcEeccCCceeecccccceecccccCCCcchHHhhhhcCcEEEEc-CCCEEEEccc Confidence 45688999999999999999999999999998765432 23478899999999999976 5799999999 Q ss_pred ecCCCccccceeehhhhhHHHHHHHHHHHHHhhcccCCHHHHHHHHHHHHHHHHHHHhCCceeeEEEEEcC-CCCHHHhh Q lcl|Aclame:pro 631 TMLNVNSALNRINVRRLLIVMRNRISQILSSYLFENNTSENRLRAEALVRQYLESLRLRGAVTDYEVAIDS-VTTPTDID 709 (742) Q Consensus 631 Tlas~D~~wrfInVRR~~d~Ie~sI~~a~~~~VfEPNd~~l~~~V~~sInafL~~L~~~GAL~Gf~V~~De-tNtp~dI~ 709 (742) |+ +.|++|+||++||++++|+++|++.++|++|||||+.+|++|+++|+.||++||++|+|.||+|+||+ +|++++++ T Consensus 278 T~-s~d~~~~~i~~rR~~~~i~~~i~~~~~~~v~e~~~~~~~~~i~~~i~~~L~~l~~~g~l~g~~v~~d~~~nt~~~i~ 356 (395) T protein:vir:98 278 TC-SDDPLFLFENYTRTAQVLADTMAEAHMWAVDKPITATLIRDIVDGINAKFRELKSNGYIVEGKCWFDEESNDKETLK 356 (395) T ss_pred cc-CCCcccceeehhhHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCceeceEEEEecCCCCHHHhh Confidence 98 56899999999999999999999999999999999999999999999999999999999999999995 58899999 Q ss_pred CCEEEEEEEEEecCCceEEEEEEEEeeceee--cC Q lcl|Aclame:pro 710 NNTLRARVTVQPARSIEYIDITFVITPTGVE--IT 742 (742) Q Consensus 710 ~GrL~i~I~vaP~~PAEfI~l~f~it~tG~~--fs 742 (742) +|+|+++|+++|++|+|||+++++++.++.+ |+ T Consensus 357 ~G~~~~~i~~~p~~p~e~I~~~~~~~~~~~~~~~~ 391 (395) T protein:vir:98 357 AGKLYIDYDYTPVPPLESLTLRQRITDKYLVNLAE 391 (395) T ss_pred CCeEEEEEEEEecCCcceEEEEEEEchHHHHHHHH Confidence 9999999999999999999999999999977 55 No 20 >protein:vir:79181 Length: 390 # NCBI annotation: gp30, phage tail sheath protein # Family: family:all:115 # MgeID: mge:1866 # MgeName: phiE202 # Cross-refs: genbank:acc:YP_001111061;genbank:gi:134288772;genbank:GeneID:4960700 Probab=100.00 E-value=5.7e-74 Score=422.15 Aligned_cols=362 Identities=14% Similarity=0.086 Sum_probs=245.2 Q ss_pred hhhheecccceEEEEEEEEEeeecccccc-ccchhhheeeeecccccceeeeeecccccccccccccceeeeccCCccee Q lcl|Aclame:pro 338 FEGIYSVGDFTVIVNELTNVSIPVTDSAI-IPPMRFTRIEQITLSGGASFSVISNQPYGFNIQDSRHSYWLSPFKDDELI 416 (742) Q Consensus 338 l~aI~avg~~tv~v~~itnv~~p~tdsa~-vp~~~~~li~~~~l~~ga~~~vl~~~~~~~~i~~s~~~~~Ls~l~d~s~~ 416 (742) +..-|.+|.....++ ...-|+....+ ++. .+.......++.+.+ .....++...+ T Consensus 1 M~~~~~~Gv~v~e~~---~~~~~i~~~~tav~~----~vg~a~dad~~~~p~-------------n~pv~its~~~---- 56 (390) T protein:vir:79 1 MPQDYHHGVRVIEIN---EGGRPIRSVSTAVLG----VVCTAADADASAFPL-------------NTPVLLTNVVA---- 56 (390) T ss_pred CccccCCCeEEEEcC---CCcccccccCCceeE----EEEecCCCCcccccc-------------ccceEeecHHH---- Confidence 333333332211110 01111100000 000 000000000000000 00000000000 Q ss_pred eecccccccccccceeEeecccccccccceeeeccCCcce-EEEecCCcccccccccc--ccccccchhhHHHhhccCC- Q lcl|Aclame:pro 417 IGTELVLPALDVSTEFGVSSWEEALPEFSFLMPFQGGSDG-YIRVDENEPDTIGRVKI--TPALLANYERLLPLLTEDQ- 492 (742) Q Consensus 417 v~td~~a~a~d~s~~v~l~~~~~~~p~a~~av~l~gGtdg-~i~vd~~~~~~ig~~~~--~~~~~a~rtGL~AL~~~d~- 492 (742) ..........++.+.......++... ...+............. .....+.++|+++++..+. T Consensus 57 --------------~~~~~g~~~tL~~al~~~~~~~~~~~~vv~v~~~~~~~~~~~~~ig~~~~~~~~tgl~al~~~~~~ 122 (390) T protein:vir:79 57 --------------ALGKAGKKGTLRRTLDAIGKQTKPLTVVVRVAEGKDADETTSNVIGTVTPDGKYTGIKALLAAQGA 122 (390) T ss_pred --------------HHHhcCCCccchhhhhhhcccccceEEEEeeccccccccccceeeecccccccchhhhhhhhhhhh Confidence 00000111112222212222222221 12222111111111111 1112357889999987654 Q ss_pred ----ccEEEEcCCCchHHHHHHHHHHHhhcCceEEEEECCCCCChHHHHHHHHhccCCcEEEEEecceeeccc--cceeE Q lcl|Aclame:pro 493 ----FDLVLTPYLTFADHAGTVNAFINRAENRFLYLFDIAGDDDTENLAISLAGYINSSFATTFFPWVRRLTN--KGMRT 566 (742) Q Consensus 493 ----v~LL~aPg~t~s~v~aal~Al~a~a~~R~~aI~D~p~~~~t~~~A~a~r~~~~S~~aaL~~PwVkv~d~--~~~~~ 566 (742) ++++++|++++..+++++..+|+.+ ++++++|+|.+. +.+.+.+|+++++|+|+++||||++.+++ +..++ T Consensus 123 ~~~~p~il~ap~~~~~~v~~~l~~~a~~~--~~~ai~D~p~~~-t~~~a~~~~~~~~s~~~~~~~p~~~~~d~~~~~~~~ 199 (390) T protein:vir:79 123 LGVKPRILAAPGLDTQPVAAALAATAQSL--RAMAYVSASGCK-TKEEAAAYRRQFGQREIMVIWPDWLGWDDTTNSTAV 199 (390) T ss_pred hccccccccCCcccchHHHHHHHHhhhhc--ceEEEEEccCCC-CHHHHHHHhcCCCCceEEEEcCceeecccccCceeE Confidence 3789999999888888888888754 456778887664 45668899999999999999999999875 45688 Q ss_pred echHHHHHHHHhhhccCceeecCCceeeEeeecc----------ccchhHHhhhcCCceEEEEcCCCEEEEcceecCCCc Q lcl|Aclame:pro 567 VPASLAAYRSIRTTDPETGLAPVGARRGVVTGEP----------VRQVDWEDLYNNRINPIVRVGNDVLLFGQKTMLNVN 636 (742) Q Consensus 567 vPpSgavAGl~ArtD~e~Gv~~SPaN~~I~~~~~----------ls~sE~d~LN~~GINtI~~fg~G~rlWGnRTlas~D 636 (742) +|||+++||++||+|.++|+|+||+|+.+.+... ....|++.||++||+++++ ++||++||+||+ +.| T Consensus 200 ~p~s~~~Ag~~a~~D~~~g~~~spsN~~i~gi~~~~~~~~~~~~~~~~~a~~Ln~~gi~t~~~-~~G~~~wG~rT~-~~d 277 (390) T protein:vir:79 200 IPAPAIAAGLRAKIDNDIGWHKTISNVVVNGVSGISADVSWDLQDPATDAGYLNEHEVTTLVN-RNGFRFWGERTC-SDD 277 (390) T ss_pred eehHHHHHHHHHhhhccCCcEEccCCceeeccceeeeeccccccccchhhhhhhhcCcEEEEc-CCCEEEEecccc-CCC Confidence 9999999999999999999999999997765432 2345778999999999987 479999999998 568 Q ss_pred cccceeehhhhhHHHHHHHHHHHHHhhcccCCHHHHHHHHHHHHHHHHHHHhCCceeeEEEEEcC-CCCHHHhhCCEEEE Q lcl|Aclame:pro 637 SALNRINVRRLLIVMRNRISQILSSYLFENNTSENRLRAEALVRQYLESLRLRGAVTDYEVAIDS-VTTPTDIDNNTLRA 715 (742) Q Consensus 637 ~~wrfInVRR~~d~Ie~sI~~a~~~~VfEPNd~~l~~~V~~sInafL~~L~~~GAL~Gf~V~~De-tNtp~dI~~GrL~i 715 (742) ++|+||++|||++||+++|+++++|++||||++.+|++|++++++||++||++|+|+||+|+||+ +|+++++++|+|++ T Consensus 278 ~~~~~i~vrR~~~~i~~~i~~~~~~~v~e~~~~~~~~~i~~~i~~~L~~l~~~gal~g~~v~~d~~~nt~~~i~~G~~~~ 357 (390) T protein:vir:79 278 PKFAFENYTRTAQVAADSIAEAQMPVVDGPLNPSLARDIVESINGWFRQQVANGYLIGGSAWIDPEPNTADILASGKAYI 357 (390) T ss_pred cccceeeehhhHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeEEEEecCCCCHHHhhCCEEEE Confidence 99999999999999999999999999999999999999999999999999999999999999995 58889999999999 Q ss_pred EEEEEecCCceEEEEEEEEeeceee--cC Q lcl|Aclame:pro 716 RVTVQPARSIEYIDITFVITPTGVE--IT 742 (742) Q Consensus 716 ~I~vaP~~PAEfI~l~f~it~tG~~--fs 742 (742) +|+++|++|+|||+++++++..+.+ |+ T Consensus 358 ~i~~~p~~p~e~i~~~~~~~~~~~~~~~~ 386 (390) T protein:vir:79 358 DYDYTPVPPLENLVLRQRITDRFLADFPA 386 (390) T ss_pred EEEEEecCCcceEEEEEEEchHHHHHHHH Confidence 9999999999999999999988855 22 No 21 >protein:vir:78206 Length: 390 # NCBI annotation: gp33, phage tail sheath protein # Family: family:all:115 # MgeID: mge:1848 # MgeName: phiE12-2 # Cross-refs: genbank:acc:YP_001111183;genbank:gi:134288694;genbank:GeneID:4960666 Probab=100.00 E-value=6.7e-74 Score=421.76 Aligned_cols=363 Identities=14% Similarity=0.077 Sum_probs=244.4 Q ss_pred hhhheecccceEEEEEEEEEeeeccccccccchhhheeeeecccccceeeeeecccccccccccccceeeeccCCcceee Q lcl|Aclame:pro 338 FEGIYSVGDFTVIVNELTNVSIPVTDSAIIPPMRFTRIEQITLSGGASFSVISNQPYGFNIQDSRHSYWLSPFKDDELII 417 (742) Q Consensus 338 l~aI~avg~~tv~v~~itnv~~p~tdsa~vp~~~~~li~~~~l~~ga~~~vl~~~~~~~~i~~s~~~~~Ls~l~d~s~~v 417 (742) +..-|.+|.. +.++.....|+....+ + ...+....... ......+ .....+. T Consensus 1 M~~~~~~Gv~---v~e~~~g~~~i~~~~t-----------------a-v~g~vg~a~~a----d~~~~pl---n~pv~i~ 52 (390) T protein:vir:78 1 MPQDYHHGVR---VIEINEGGRPIRSVST-----------------A-VLGVVCTAADA----DASAFPL---NTPVLLT 52 (390) T ss_pred CcccccCCeE---EEEcCCCcccccccCc-----------------c-eeEEEEcccCc----Ccccccc---ccceEec Confidence 3222222221 1111000000000000 0 00000000000 0000000 0000000 Q ss_pred ecccccccccccceeEeecccccccccceeeeccCCcce-EEEecCCccccccccccccc--cccchhhHHHhhccCC-- Q lcl|Aclame:pro 418 GTELVLPALDVSTEFGVSSWEEALPEFSFLMPFQGGSDG-YIRVDENEPDTIGRVKITPA--LLANYERLLPLLTEDQ-- 492 (742) Q Consensus 418 ~td~~a~a~d~s~~v~l~~~~~~~p~a~~av~l~gGtdg-~i~vd~~~~~~ig~~~~~~~--~~a~rtGL~AL~~~d~-- 492 (742) . .............++.+.......++... .+.+....+.........+. ..+.++|+++++..+. T Consensus 53 s---------~~~~~~~~g~~gtL~~al~~~~~~gg~~~~vv~v~~~~~~~~~~~~~ig~~~~~~~~tg~~al~~~~~~~ 123 (390) T protein:vir:78 53 N---------VVAALGKAGKKGTLRRTLDAIGKQTKPLTVVVRVAEGKDADETTSNVIGTVTPDGKYTGIKALLAAQGAL 123 (390) T ss_pred c---------HHHHHhhcCCCceehhhhhhhccccCceEEEEEecccccccccccccccccccccccchhhhhhhhhhhh Confidence 0 00000111111222222222222333222 22222222222222222211 2346789999887643 Q ss_pred ---ccEEEEcCCCchHHHHHHHHHHHhhcCceEEEEECCCCCChHHHHHHHHhccCCcEEEEEecceeeccc--cceeEe Q lcl|Aclame:pro 493 ---FDLVLTPYLTFADHAGTVNAFINRAENRFLYLFDIAGDDDTENLAISLAGYINSSFATTFFPWVRRLTN--KGMRTV 567 (742) Q Consensus 493 ---v~LL~aPg~t~s~v~aal~Al~a~a~~R~~aI~D~p~~~~t~~~A~a~r~~~~S~~aaL~~PwVkv~d~--~~~~~v 567 (742) +.++++|++++..+++++..+|+.+ +.++++|+|.+. +.+.+.+|+++++|+|+++||||++..++ ...+++ T Consensus 124 ~~~p~il~ap~~~~~~v~~~l~~~a~~~--~~~aivD~p~~~-t~~~a~~~~~~~~s~~~~~~~p~~~~~d~~~~~~~~~ 200 (390) T protein:vir:78 124 GVKPRILAAPGLDTQPVAAALAATAQSL--RAMAYVSASGCK-TKEEAAAYRKQFGQREIMVIWPDWLGWDDTTNSTAVI 200 (390) T ss_pred cceehhhcccccchHHHHHHHHHhhccc--ceEEEEecCCCC-CHHHHHHHhhccCCceEEEEcCceEeecccCCccccc Confidence 4788999999999999888888765 356778887654 45678899999999999999999998875 456789 Q ss_pred chHHHHHHHHhhhccCceeecCCceeeEeeecc----------ccchhHHhhhcCCceEEEEcCCCEEEEcceecCCCcc Q lcl|Aclame:pro 568 PASLAAYRSIRTTDPETGLAPVGARRGVVTGEP----------VRQVDWEDLYNNRINPIVRVGNDVLLFGQKTMLNVNS 637 (742) Q Consensus 568 PpSgavAGl~ArtD~e~Gv~~SPaN~~I~~~~~----------ls~sE~d~LN~~GINtI~~fg~G~rlWGnRTlas~D~ 637 (742) |||+++||++||+|.++|+|+||+|+.+.+... ....|.+.||++||++++++ +||++||+||+ +.|+ T Consensus 201 p~s~~~Agl~a~~D~~~g~~~spaN~~l~gi~~~~~~~~~~~~~~~~~~~~ln~~gi~t~~~~-~G~~~wG~rT~-s~d~ 278 (390) T protein:vir:78 201 PAPAIAAGLRAKIDNDIGWHKTISNVVVNGVSGISADVSWDLQDPATDAGYLNEHEVTTLVNR-NGFRFWGERTC-SDDP 278 (390) T ss_pred chHHHHHHHHHHhhcCCCcEECcCCceeeceeecceecccccccccchhhhhhhcCcEEEEcC-CCEEEEccccc-CCCc Confidence 999999999999999999999999987755432 23457789999999999874 79999999998 5789 Q ss_pred ccceeehhhhhHHHHHHHHHHHHHhhcccCCHHHHHHHHHHHHHHHHHHHhCCceeeEEEEEcC-CCCHHHhhCCEEEEE Q lcl|Aclame:pro 638 ALNRINVRRLLIVMRNRISQILSSYLFENNTSENRLRAEALVRQYLESLRLRGAVTDYEVAIDS-VTTPTDIDNNTLRAR 716 (742) Q Consensus 638 ~wrfInVRR~~d~Ie~sI~~a~~~~VfEPNd~~l~~~V~~sInafL~~L~~~GAL~Gf~V~~De-tNtp~dI~~GrL~i~ 716 (742) +|+||++|||++||+++|+++++|++||||++.+|++|++++++||++||++|+|+||+|+||+ +|+++||++|+|+++ T Consensus 279 ~~~~i~~rR~~~~i~~~i~~~~~~~v~e~n~~~~~~~i~~~i~~~L~~l~~~g~l~g~~v~~d~~~nt~~~i~~G~~~~~ 358 (390) T protein:vir:78 279 KFAFENYTRTAQVAGDSIAEAQMPVVDGPLNPSLARDIVESINGWFRQQVANGYLIGGSAWIDPEPNTADILASGKAYID 358 (390) T ss_pred ccceeehhhHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeEEEEccCCCCHHHhhCCeEEEE Confidence 9999999999999999999999999999999999999999999999999999999999999995 588899999999999 Q ss_pred EEEEecCCceEEEEEEEEeeceeecC Q lcl|Aclame:pro 717 VTVQPARSIEYIDITFVITPTGVEIT 742 (742) Q Consensus 717 I~vaP~~PAEfI~l~f~it~tG~~fs 742 (742) |+++|++|||||+++++++..+.+-- T Consensus 359 v~~~p~~pae~I~~~~~~~~~~~~~~ 384 (390) T protein:vir:78 359 YDYTPVPPLENLVLRQRITDRFLADF 384 (390) T ss_pred EEEEecCCcceEEEEEEEchHHHHHH Confidence 99999999999999999888764322 No 22 >protein:vir:103993 Length: 390 # NCBI annotation: phage tail sheath protein # Family: family:all:115 # MgeID: mge:1665 # MgeName: phi52237 # Cross-refs: genbank:acc:YP_293729;genbank:gi:72537699;genbank:GeneID:3608123 Probab=100.00 E-value=6.7e-74 Score=421.76 Aligned_cols=363 Identities=14% Similarity=0.077 Sum_probs=244.4 Q ss_pred hhhheecccceEEEEEEEEEeeeccccccccchhhheeeeecccccceeeeeecccccccccccccceeeeccCCcceee Q lcl|Aclame:pro 338 FEGIYSVGDFTVIVNELTNVSIPVTDSAIIPPMRFTRIEQITLSGGASFSVISNQPYGFNIQDSRHSYWLSPFKDDELII 417 (742) Q Consensus 338 l~aI~avg~~tv~v~~itnv~~p~tdsa~vp~~~~~li~~~~l~~ga~~~vl~~~~~~~~i~~s~~~~~Ls~l~d~s~~v 417 (742) +..-|.+|.. +.++.....|+....+ + ...+....... ......+ .....+. T Consensus 1 M~~~~~~Gv~---v~e~~~g~~~i~~~~t-----------------a-v~g~vg~a~~a----d~~~~pl---n~pv~i~ 52 (390) T protein:vir:10 1 MPQDYHHGVR---VIEINEGGRPIRSVST-----------------A-VLGVVCTAADA----DASAFPL---NTPVLLT 52 (390) T ss_pred CcccccCCeE---EEEcCCCcccccccCc-----------------c-eeEEEEcccCc----Ccccccc---ccceEec Confidence 3222222221 1111000000000000 0 00000000000 0000000 0000000 Q ss_pred ecccccccccccceeEeecccccccccceeeeccCCcce-EEEecCCccccccccccccc--cccchhhHHHhhccCC-- Q lcl|Aclame:pro 418 GTELVLPALDVSTEFGVSSWEEALPEFSFLMPFQGGSDG-YIRVDENEPDTIGRVKITPA--LLANYERLLPLLTEDQ-- 492 (742) Q Consensus 418 ~td~~a~a~d~s~~v~l~~~~~~~p~a~~av~l~gGtdg-~i~vd~~~~~~ig~~~~~~~--~~a~rtGL~AL~~~d~-- 492 (742) . .............++.+.......++... .+.+....+.........+. ..+.++|+++++..+. T Consensus 53 s---------~~~~~~~~g~~gtL~~al~~~~~~gg~~~~vv~v~~~~~~~~~~~~~ig~~~~~~~~tg~~al~~~~~~~ 123 (390) T protein:vir:10 53 N---------VVAALGKAGKKGTLRRTLDAIGKQTKPLTVVVRVAEGKDADETTSNVIGTVTPDGKYTGIKALLAAQGAL 123 (390) T ss_pred c---------HHHHHhhcCCCceehhhhhhhccccCceEEEEEecccccccccccccccccccccccchhhhhhhhhhhh Confidence 0 00000111111222222222222333222 22222222222222222211 2346789999887643 Q ss_pred ---ccEEEEcCCCchHHHHHHHHHHHhhcCceEEEEECCCCCChHHHHHHHHhccCCcEEEEEecceeeccc--cceeEe Q lcl|Aclame:pro 493 ---FDLVLTPYLTFADHAGTVNAFINRAENRFLYLFDIAGDDDTENLAISLAGYINSSFATTFFPWVRRLTN--KGMRTV 567 (742) Q Consensus 493 ---v~LL~aPg~t~s~v~aal~Al~a~a~~R~~aI~D~p~~~~t~~~A~a~r~~~~S~~aaL~~PwVkv~d~--~~~~~v 567 (742) +.++++|++++..+++++..+|+.+ +.++++|+|.+. +.+.+.+|+++++|+|+++||||++..++ ...+++ T Consensus 124 ~~~p~il~ap~~~~~~v~~~l~~~a~~~--~~~aivD~p~~~-t~~~a~~~~~~~~s~~~~~~~p~~~~~d~~~~~~~~~ 200 (390) T protein:vir:10 124 GVKPRILAAPGLDTQPVAAALAATAQSL--RAMAYVSASGCK-TKEEAAAYRKQFGQREIMVIWPDWLGWDDTTNSTAVI 200 (390) T ss_pred cceehhhcccccchHHHHHHHHHhhccc--ceEEEEecCCCC-CHHHHHHHhhccCCceEEEEcCceEeecccCCccccc Confidence 4788999999999999888888765 356778887654 45678899999999999999999998875 456789 Q ss_pred chHHHHHHHHhhhccCceeecCCceeeEeeecc----------ccchhHHhhhcCCceEEEEcCCCEEEEcceecCCCcc Q lcl|Aclame:pro 568 PASLAAYRSIRTTDPETGLAPVGARRGVVTGEP----------VRQVDWEDLYNNRINPIVRVGNDVLLFGQKTMLNVNS 637 (742) Q Consensus 568 PpSgavAGl~ArtD~e~Gv~~SPaN~~I~~~~~----------ls~sE~d~LN~~GINtI~~fg~G~rlWGnRTlas~D~ 637 (742) |||+++||++||+|.++|+|+||+|+.+.+... ....|.+.||++||++++++ +||++||+||+ +.|+ T Consensus 201 p~s~~~Agl~a~~D~~~g~~~spaN~~l~gi~~~~~~~~~~~~~~~~~~~~ln~~gi~t~~~~-~G~~~wG~rT~-s~d~ 278 (390) T protein:vir:10 201 PAPAIAAGLRAKIDNDIGWHKTISNVVVNGVSGISADVSWDLQDPATDAGYLNEHEVTTLVNR-NGFRFWGERTC-SDDP 278 (390) T ss_pred chHHHHHHHHHHhhcCCCcEECcCCceeeceeecceecccccccccchhhhhhhcCcEEEEcC-CCEEEEccccc-CCCc Confidence 999999999999999999999999987755432 23457789999999999874 79999999998 5789 Q ss_pred ccceeehhhhhHHHHHHHHHHHHHhhcccCCHHHHHHHHHHHHHHHHHHHhCCceeeEEEEEcC-CCCHHHhhCCEEEEE Q lcl|Aclame:pro 638 ALNRINVRRLLIVMRNRISQILSSYLFENNTSENRLRAEALVRQYLESLRLRGAVTDYEVAIDS-VTTPTDIDNNTLRAR 716 (742) Q Consensus 638 ~wrfInVRR~~d~Ie~sI~~a~~~~VfEPNd~~l~~~V~~sInafL~~L~~~GAL~Gf~V~~De-tNtp~dI~~GrL~i~ 716 (742) +|+||++|||++||+++|+++++|++||||++.+|++|++++++||++||++|+|+||+|+||+ +|+++||++|+|+++ T Consensus 279 ~~~~i~~rR~~~~i~~~i~~~~~~~v~e~n~~~~~~~i~~~i~~~L~~l~~~g~l~g~~v~~d~~~nt~~~i~~G~~~~~ 358 (390) T protein:vir:10 279 KFAFENYTRTAQVAGDSIAEAQMPVVDGPLNPSLARDIVESINGWFRQQVANGYLIGGSAWIDPEPNTADILASGKAYID 358 (390) T ss_pred ccceeehhhHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeEEEEccCCCCHHHhhCCeEEEE Confidence 9999999999999999999999999999999999999999999999999999999999999995 588899999999999 Q ss_pred EEEEecCCceEEEEEEEEeeceeecC Q lcl|Aclame:pro 717 VTVQPARSIEYIDITFVITPTGVEIT 742 (742) Q Consensus 717 I~vaP~~PAEfI~l~f~it~tG~~fs 742 (742) |+++|++|||||+++++++..+.+-- T Consensus 359 v~~~p~~pae~I~~~~~~~~~~~~~~ 384 (390) T protein:vir:10 359 YDYTPVPPLENLVLRQRITDRFLADF 384 (390) T ss_pred EEEEecCCcceEEEEEEEchHHHHHH Confidence 99999999999999999888764322 No 23 >protein:vir:5711 Length: 396 # NCBI annotation: gpFI # Family: family:all:115 # MgeID: mge:120 # MgeName: L-413C # Cross-refs: genbank:acc:NP_839870;genbank:gi:30065725;genbank:GeneID:1260618 Probab=100.00 E-value=6.3e-74 Score=421.88 Aligned_cols=362 Identities=13% Similarity=0.079 Sum_probs=241.8 Q ss_pred hhhheecccceEEEEEEEEEeeeccccccccchhhheeeeecccccceeeeeecccccccccccccceeeeccCCcceee Q lcl|Aclame:pro 338 FEGIYSVGDFTVIVNELTNVSIPVTDSAIIPPMRFTRIEQITLSGGASFSVISNQPYGFNIQDSRHSYWLSPFKDDELII 417 (742) Q Consensus 338 l~aI~avg~~tv~v~~itnv~~p~tdsa~vp~~~~~li~~~~l~~ga~~~vl~~~~~~~~i~~s~~~~~Ls~l~d~s~~v 417 (742) +.. |.+|- .+.++-....++..- .......+.......++.+.. ..+..++...+- T Consensus 1 m~~-~~~GV---~v~e~~~g~~~i~~v---~tav~~~vg~a~~~d~~~~~~-------------~~pv~i~s~~~~---- 56 (396) T protein:vir:57 1 MSD-YHHGV---QVLEINDGTRVISTV---STAIVGMVCTASDADAETFPL-------------NKPVLITNVQSA---- 56 (396) T ss_pred CCC-CCCce---EEEEcCCCccccccc---CCceEEEEEeccCCCcccccC-------------ccCeEeecchhh---- Confidence 211 22321 111110000000000 000000000111111111100 000000000000 Q ss_pred ecccccccccccceeEeecccccccccceeeeccCCcceEE-Ee------cCCccccccccccc--cccccchhhHHHhh Q lcl|Aclame:pro 418 GTELVLPALDVSTEFGVSSWEEALPEFSFLMPFQGGSDGYI-RV------DENEPDTIGRVKIT--PALLANYERLLPLL 488 (742) Q Consensus 418 ~td~~a~a~d~s~~v~l~~~~~~~p~a~~av~l~gGtdg~i-~v------d~~~~~~ig~~~~~--~~~~a~rtGL~AL~ 488 (742) ..... ....++.+.......++...++ .+ ........+..... ....+.++|+++|+ T Consensus 57 -----~~~~g---------~~~tl~~al~~~~~~~~~~~~vv~~~~~~~~~~~~~~a~t~~~iiG~~~~~~~~tgl~al~ 122 (396) T protein:vir:57 57 -----IAKAG---------KKGTLAASLQAIADQSKPVTVVVRVEDGTGDDEETKLAQTVSNIIGTTDENGQYTGLKALM 122 (396) T ss_pred -----hhhcc---------cccchHHHHHHhhhcCCceeEeeeccccccccccccccccceeeeeeccccccchhhhhhh Confidence 00000 0000000000000011110000 00 00000000111111 11245788999998 Q ss_pred ccCCc-----cEEEEcCCCchHHHHHHHHHHHhhcCceEEEEECCCCCChHHHHHHHHhccCCcEEEEEecceeeccc-- Q lcl|Aclame:pro 489 TEDQF-----DLVLTPYLTFADHAGTVNAFINRAENRFLYLFDIAGDDDTENLAISLAGYINSSFATTFFPWVRRLTN-- 561 (742) Q Consensus 489 ~~d~v-----~LL~aPg~t~s~v~aal~Al~a~a~~R~~aI~D~p~~~~t~~~A~a~r~~~~S~~aaL~~PwVkv~d~-- 561 (742) +.+.. +++++|+.++..+++++.++|+.+ ++++++|+|.+. +.+.+.+|+++++|+|+++||||++..++ T Consensus 123 ~~~~~~~~~p~i~~ap~~~~~~v~~al~~~~~~~--~~~~~~d~p~~~-~~~~~~~~~~~~~s~~~~~~~p~~~~~d~~~ 199 (396) T protein:vir:57 123 GAESVTGVKPRILGVPGLDTKEVAVALASVCQEL--NAFGYISAWGCK-TISEVKAYRQNFSQRELMVIWPDFLAWDTVT 199 (396) T ss_pred hcccceeEEeccccCcccchhHHHHHHHHHhhhC--ceEEEEcCCCCC-CHHHHHHHHhccCCceEEEEcceeeeecccC Confidence 87653 678899998888999999999765 566778888664 45678899999999999999999998874 Q ss_pred cceeEechHHHHHHHHhhhccCceeecCCceeeEeeecc----------ccchhHHhhhcCCceEEEEcCCCEEEEccee Q lcl|Aclame:pro 562 KGMRTVPASLAAYRSIRTTDPETGLAPVGARRGVVTGEP----------VRQVDWEDLYNNRINPIVRVGNDVLLFGQKT 631 (742) Q Consensus 562 ~~~~~vPpSgavAGl~ArtD~e~Gv~~SPaN~~I~~~~~----------ls~sE~d~LN~~GINtI~~fg~G~rlWGnRT 631 (742) +..+++|||+++||++||+|.++|+|+||+|+.+.+... ..++|++.||++||||+++ ++||++||+|| T Consensus 200 ~~~~~~p~s~~~Ag~~a~~d~~~g~~~spaN~~l~gi~~~~~~~~~~~~~~~~~~~~Ln~~gi~t~~~-~~G~~~wG~rT 278 (396) T protein:vir:57 200 STTATAYATARALGLRAKIDQEQGWHKTLSNVGVNGVTGISASVFWDLQKPGTDADLLNEAGVTTLVR-RDGFRFWGNRT 278 (396) T ss_pred CceeEEehhHHHHHHHHHhhhccCcEeccCCceeccccccceecccccCCcchhhhhhhhcCcEEEEc-CCCEEEEcccc Confidence 456889999999999999999999999999987765432 2467899999999999987 47999999999 Q ss_pred cCCCccccceeehhhhhHHHHHHHHHHHHHhhcccCCHHHHHHHHHHHHHHHHHHHhCCceeeEEEEEcCC-CCHHHhhC Q lcl|Aclame:pro 632 MLNVNSALNRINVRRLLIVMRNRISQILSSYLFENNTSENRLRAEALVRQYLESLRLRGAVTDYEVAIDSV-TTPTDIDN 710 (742) Q Consensus 632 las~D~~wrfInVRR~~d~Ie~sI~~a~~~~VfEPNd~~l~~~V~~sInafL~~L~~~GAL~Gf~V~~Det-Ntp~dI~~ 710 (742) + +.|++|+||++||+++||+++|++.++|++||||++.+|++|+++|++||++||++|+|+||+|+||++ |+++++++ T Consensus 279 ~-~~d~~~~~i~vrR~~~~i~~~i~~~~~~~v~e~n~~~~~~~i~~~i~~~l~~l~~~gal~g~~v~~d~~~n~~~~i~~ 357 (396) T protein:vir:57 279 C-SDDPLFLFESYTRTAQVLADTMAEAHMWAIDKPITATLIRDIIDGINAKFRELKNNGYIVDGTCWFSEESNDAETLKA 357 (396) T ss_pred c-CCCcccceeehhhHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCceeceEEEEecCCCCHHHhhC Confidence 8 568999999999999999999999999999999999999999999999999999999999999999965 88899999 Q ss_pred CEEEEEEEEEecCCceEEEEEEEEeeceeecC Q lcl|Aclame:pro 711 NTLRARVTVQPARSIEYIDITFVITPTGVEIT 742 (742) Q Consensus 711 GrL~i~I~vaP~~PAEfI~l~f~it~tG~~fs 742 (742) |+|+++|+++|++|+|||+|+++++..+.+-- T Consensus 358 G~~~~~v~~~p~~p~e~I~~~~~~~~~~~~~~ 389 (396) T protein:vir:57 358 GKLYIDYDYTPVPPLENLTLRQRITSRYLASL 389 (396) T ss_pred CeEEEEEEEEecCCcceEEEEEEEchHHHHHH Confidence 99999999999999999999999998885522 No 24 >protein:vir:1845 Length: 392 # NCBI annotation: tail sheath protein FI # Family: family:all:115 # MgeID: mge:324 # MgeName: 186 # Cross-refs: genbank:acc:NP_052269;genbank:gi:9634076;genbank:GeneID:1262448 Probab=100.00 E-value=1.1e-73 Score=420.67 Aligned_cols=362 Identities=13% Similarity=0.093 Sum_probs=245.7 Q ss_pred hhhheecccceEEEEEEEEEeeeccccccccchhhheeeeecccccceeeeeecccccccccccccceeeeccCCcceee Q lcl|Aclame:pro 338 FEGIYSVGDFTVIVNELTNVSIPVTDSAIIPPMRFTRIEQITLSGGASFSVISNQPYGFNIQDSRHSYWLSPFKDDELII 417 (742) Q Consensus 338 l~aI~avg~~tv~v~~itnv~~p~tdsa~vp~~~~~li~~~~l~~ga~~~vl~~~~~~~~i~~s~~~~~Ls~l~d~s~~v 417 (742) +.. |-||.....+.. ...|+..-.+ .....+.......++.+.. ..+..++... T Consensus 1 m~~-~~~Gv~v~e~~~---g~~~i~~~~t---av~g~vgta~~~~~~~~~~-------------~~p~~its~~------ 54 (392) T protein:vir:18 1 MSD-FHHGTKVIEIND---GTRVISTVAT---AIVGMVWTASDADAETFPL-------------NEPVLITNVQ------ 54 (392) T ss_pred CCC-CCCCeEEEEcCC---CceeeeccCc---ceeEEEEeccCCCCccccc-------------ccceEeechH------ Confidence 222 224322222111 1111100000 0000001111111111000 0000011100 Q ss_pred ecccccccccccceeEeecccccccccceeeeccCCcceEEE-ecC---Ccccccccccccc--ccccchhhHHHhhccC Q lcl|Aclame:pro 418 GTELVLPALDVSTEFGVSSWEEALPEFSFLMPFQGGSDGYIR-VDE---NEPDTIGRVKITP--ALLANYERLLPLLTED 491 (742) Q Consensus 418 ~td~~a~a~d~s~~v~l~~~~~~~p~a~~av~l~gGtdg~i~-vd~---~~~~~ig~~~~~~--~~~a~rtGL~AL~~~d 491 (742) .+.... .....++.+.......++...... +.. ..+.........+ ...+.++|+++|++.. T Consensus 55 ---~~~~~~---------g~~gtl~~al~~~~~ngg~~~~vv~v~~~~~~~~~~~t~~dliG~~~~~~~~tg~~al~~~~ 122 (392) T protein:vir:18 55 ---SAIAKA---------GKKGTLSASLQAIADQSKPVTVVVRVAEGTGDDAEAQTTSNIIGGTDENGKYTGIKALLTAE 122 (392) T ss_pred ---HHHhhc---------CCCcchHHHHHHhhcccCceEEEecccccccccccccchhhheecccccchhhhHHHHHhhh Confidence 000000 001111111111122222211111 100 0111111111111 1345788999988765 Q ss_pred C-----ccEEEEcCCCchHHHHHHHHHHHhhcCceEEEEECCCCCChHHHHHHHHhccCCcEEEEEecceeeccc--cce Q lcl|Aclame:pro 492 Q-----FDLVLTPYLTFADHAGTVNAFINRAENRFLYLFDIAGDDDTENLAISLAGYINSSFATTFFPWVRRLTN--KGM 564 (742) Q Consensus 492 ~-----v~LL~aPg~t~s~v~aal~Al~a~a~~R~~aI~D~p~~~~t~~~A~a~r~~~~S~~aaL~~PwVkv~d~--~~~ 564 (742) . ++++++||+++..+++++.++|+.+ ++++++|+|.+. +.+.+.+|+++++|+|+++||||++..++ +.. T Consensus 123 ~~~~~~p~il~ap~~~~~~v~~~l~~~~~~~--~~~~~~d~~~~~-~~~~a~~~~~~~~s~~~~~~~p~~~~~d~~~~~~ 199 (392) T protein:vir:18 123 AVTGVKPRILGVPGLDTQEVATALASVCISL--RAFGYVSAWGCK-TISEAMAYRENFSQRELMVIWPDFLAWDTTANAT 199 (392) T ss_pred hhhceeehhcccCccchHHHHHHHHHHHhhc--CcEEEEecCCCC-CHHHHHHHHhhccCceEEEEeCceeeecccCCce Confidence 3 4789999999999999998888764 446677876654 45667899999999999999999998874 456 Q ss_pred eEechHHHHHHHHhhhccCceeecCCceeeEeeecc----------ccchhHHhhhcCCceEEEEcCCCEEEEcceecCC Q lcl|Aclame:pro 565 RTVPASLAAYRSIRTTDPETGLAPVGARRGVVTGEP----------VRQVDWEDLYNNRINPIVRVGNDVLLFGQKTMLN 634 (742) Q Consensus 565 ~~vPpSgavAGl~ArtD~e~Gv~~SPaN~~I~~~~~----------ls~sE~d~LN~~GINtI~~fg~G~rlWGnRTlas 634 (742) +++|||+++||++|++|.++|+|+||+|+.+.+... ..+.|++.||++|||++++ ++|+++||+||+ + T Consensus 200 ~~~p~s~~~AG~~a~~d~~~g~~~spaN~~l~gi~~~~~~~~~~~~~~~~~~~~Ln~~gI~t~~~-~~G~~~wG~rT~-~ 277 (392) T protein:vir:18 200 ATAYATARALGLRAYIDQTIGWHKTLSNVGVQGVTGISASVFWDLQASGTDADLLNEAGVTTLVR-KDGFRFWGNRTC-S 277 (392) T ss_pred EEechHHHHHHHHHhhhccCCceEccCCceeeceeecceecccccCCCcchhhhhhhcCceEEEc-CCCEEEEccccc-C Confidence 789999999999999999999999999997765432 3467899999999999986 579999999998 5 Q ss_pred CccccceeehhhhhHHHHHHHHHHHHHhhcccCCHHHHHHHHHHHHHHHHHHHhCCceeeEEEEEcC-CCCHHHhhCCEE Q lcl|Aclame:pro 635 VNSALNRINVRRLLIVMRNRISQILSSYLFENNTSENRLRAEALVRQYLESLRLRGAVTDYEVAIDS-VTTPTDIDNNTL 713 (742) Q Consensus 635 ~D~~wrfInVRR~~d~Ie~sI~~a~~~~VfEPNd~~l~~~V~~sInafL~~L~~~GAL~Gf~V~~De-tNtp~dI~~GrL 713 (742) .|++||||++||++++|+++|++.++|+|||||++.+|++|+++|++||++||++|+|+||+|+||+ +|+++++++|+| T Consensus 278 ~d~~~~~i~~rR~~~~i~~~i~~~~~~~v~e~n~~~~~~~i~~~i~~~L~~l~~~gal~g~~v~~d~~~nt~~~i~~G~~ 357 (392) T protein:vir:18 278 DDPLFLFENYTRTAQVLADTMAEAHMWAVDKPITASLIRDIVDGINAKFRELKSNGYIVDGECWFDEESNDKETLKAGKL 357 (392) T ss_pred CCcccceeehhhHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhcCcccceEEEEecCCCCHHHhhCCeE Confidence 6899999999999999999999999999999999999999999999999999999999999999995 588899999999 Q ss_pred EEEEEEEecCCceEEEEEEEEeeceee--cC Q lcl|Aclame:pro 714 RARVTVQPARSIEYIDITFVITPTGVE--IT 742 (742) Q Consensus 714 ~i~I~vaP~~PAEfI~l~f~it~tG~~--fs 742 (742) +++|+++|++|||||+|+++++..+.+ |+ T Consensus 358 ~~~v~~~p~~p~e~I~~~~~~~~~~~~~~~~ 388 (392) T protein:vir:18 358 YIDYDYTPVPPLESLTLRQRITDKYLVNLAE 388 (392) T ss_pred EEEEEEEecCCcceEEEEEEEchHHHHHHHH Confidence 999999999999999999999999966 44 No 25 >protein:vir:100323 Length: 393 # NCBI annotation: tail sheath protein FI # Family: family:all:115 # MgeID: mge:1484 # MgeName: phi-MhaA1-PHL101 # Cross-refs: genbank:acc:YP_655492;genbank:gi:109289960;genbank:GeneID:4157366 Probab=100.00 E-value=1.2e-73 Score=420.35 Aligned_cols=365 Identities=13% Similarity=0.041 Sum_probs=245.4 Q ss_pred hhhhhheecccceEEEEEEEEEeeeccccccccchhhheeeeecccccceeeeeecccccccccccccceeeeccCCcce Q lcl|Aclame:pro 336 VGFEGIYSVGDFTVIVNELTNVSIPVTDSAIIPPMRFTRIEQITLSGGASFSVISNQPYGFNIQDSRHSYWLSPFKDDEL 415 (742) Q Consensus 336 ~al~aI~avg~~tv~v~~itnv~~p~tdsa~vp~~~~~li~~~~l~~ga~~~vl~~~~~~~~i~~s~~~~~Ls~l~d~s~ 415 (742) =+...-|-+|.....+ .....|+. ... .....+....... ..... .+..... T Consensus 1 m~m~~~~~~GV~v~e~---~~g~~~i~----------------~~~--tav~~~vgta~~~----~~~~~---pln~pv~ 52 (393) T protein:vir:10 1 MSILDTYLHGVEVVEV---NAGGVTIS----------------TAA--TSVIGVVCTGDQA----DAETF---PLNTPVL 52 (393) T ss_pred CCCCCccCCCeEEEEc---CCCcceec----------------ccC--cceeEEEeeccCc----Ccccc---cCccceE Confidence 1111111122111110 00000000 000 0000000000000 00000 0000000 Q ss_pred eeecccccccccccceeEeecccccccccceeeeccCCcceE-EEecCCcccccccccccc-ccccchhhHHHhhccCC- Q lcl|Aclame:pro 416 IIGTELVLPALDVSTEFGVSSWEEALPEFSFLMPFQGGSDGY-IRVDENEPDTIGRVKITP-ALLANYERLLPLLTEDQ- 492 (742) Q Consensus 416 ~v~td~~a~a~d~s~~v~l~~~~~~~p~a~~av~l~gGtdg~-i~vd~~~~~~ig~~~~~~-~~~a~rtGL~AL~~~d~- 492 (742) +.....+... .+....++.+.......++...+ ..+..............+ .....++|+++|++... T Consensus 53 i~s~~~~~~~---------~g~~g~L~~al~~~~~~~~~~~~vv~v~~~~~~~~t~~~iig~~~~~~~tgl~al~~~~~~ 123 (393) T protein:vir:10 53 ITNPLNYLEK---------AGSTGTLRRTLNSIGSIVKTPTVIVRVAESDDSDTLTANIVGTQENGKFTGIKALLTAQST 123 (393) T ss_pred ecchHHHHHh---------hCCccchhhhhhhhhcccCceEEEeecccCccccccccccccccccchhhHHHHHHhhhhh Confidence 0000000100 11112222222222222222222 222222222222222222 22346789999987643 Q ss_pred ----ccEEEEcCCCchHHHHHHHHHHHhhcCceEEEEECCCCCChHHHHHHHHhccCCcEEEEEecceeeccc--cceeE Q lcl|Aclame:pro 493 ----FDLVLTPYLTFADHAGTVNAFINRAENRFLYLFDIAGDDDTENLAISLAGYINSSFATTFFPWVRRLTN--KGMRT 566 (742) Q Consensus 493 ----v~LL~aPg~t~s~v~aal~Al~a~a~~R~~aI~D~p~~~~t~~~A~a~r~~~~S~~aaL~~PwVkv~d~--~~~~~ 566 (742) ++|+++||+++..+++++.++|+.++.+ +++.|+|.. +.+.+..|+++++|+|+++||||++.+++ +..++ T Consensus 124 ~~~~p~li~apg~~~~~~~~al~~~~~~~~~~-~~v~d~~~~--t~~~ai~~~~~~~s~~~~~~~P~~~~~d~~~~~~~~ 200 (393) T protein:vir:10 124 VFVKPKLLCVPQHDNQAVATELLSVAKKLNAF-AFISDNGAT--TKEQAYTYRQNFSQREGMMIFGDWKSYNTDKKAYDT 200 (393) T ss_pred cceeeeeeeeccccchHHHHHHHHHhhccCcE-EEEEcCCCC--CHHHHHHHhhhcCCceEEEEecccccccccCCceeE Confidence 4799999999999999999999887644 445565543 45668899999999999999999998774 46688 Q ss_pred echHHHHHHHHhhhccCceeecCCceeeEeeecc----------ccchhHHhhhcCCceEEEEcCCCEEEEcceecCCCc Q lcl|Aclame:pro 567 VPASLAAYRSIRTTDPETGLAPVGARRGVVTGEP----------VRQVDWEDLYNNRINPIVRVGNDVLLFGQKTMLNVN 636 (742) Q Consensus 567 vPpSgavAGl~ArtD~e~Gv~~SPaN~~I~~~~~----------ls~sE~d~LN~~GINtI~~fg~G~rlWGnRTlas~D 636 (742) +|||+++||++||+|.++|+|+||+|+.+.+... +.++|++.||++||||+++ ++||++||+||+ +.| T Consensus 201 ~p~s~~~Ag~~a~~d~~~G~~~spaN~~l~gi~~~~~~~~~~~~~~~~~~~~Ln~~gI~t~~~-~~G~~~wG~rT~-s~d 278 (393) T protein:vir:10 201 DYAVARACALQAYIDKTVGWHKNISNVELDGVTGITKAVEFDINESSTEANYLNEKGITICLN-HNGFRYWGSRTL-ATD 278 (393) T ss_pred eehhHHHHHHHHHhhcCCCcEEccCCceeeceeecceecccccCCCcchhHhHhhcCceEEEc-CCCEEEEccccc-CCC Confidence 9999999999999999999999999987655432 3467899999999999976 479999999998 568 Q ss_pred cccceeehhhhhHHHHHHHHHHHHHhhcccCCHHHHHHHHHHHHHHHHHHHhCC--ceeeEEEEEcCCCCHHHhhCCEEE Q lcl|Aclame:pro 637 SALNRINVRRLLIVMRNRISQILSSYLFENNTSENRLRAEALVRQYLESLRLRG--AVTDYEVAIDSVTTPTDIDNNTLR 714 (742) Q Consensus 637 ~~wrfInVRR~~d~Ie~sI~~a~~~~VfEPNd~~l~~~V~~sInafL~~L~~~G--AL~Gf~V~~DetNtp~dI~~GrL~ 714 (742) ++|+||++|||+++|+++|++.++|++||||++.+|+++++++++||++||+.| +|.|++|+||++||++|+++|+|+ T Consensus 279 ~~~~~i~vrR~~~~i~~~i~~~~~~~v~e~~~~~~~~~i~~~i~~~L~~l~~~g~~al~g~~v~~~~~nt~~~i~~G~~~ 358 (393) T protein:vir:10 279 TRWAFQQSVRTAQIIKETIGAGLAWAVDMPLTPLRVKTMLEAINNKLRSWASGDDPRILGARVWVAEEITADIIKSGKFV 358 (393) T ss_pred cccceeehhhHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhccccccccceEEecCCCCHHHhhCCEEE Confidence 999999999999999999999999999999999999999999999999999855 899999999999999999999999 Q ss_pred EEEEEEecCCceEEEEEEEEeeceeecC Q lcl|Aclame:pro 715 ARVTVQPARSIEYIDITFVITPTGVEIT 742 (742) Q Consensus 715 i~I~vaP~~PAEfI~l~f~it~tG~~fs 742 (742) ++|+++|++|+|||++++.++.++.+-- T Consensus 359 ~~i~~~p~~p~e~I~~~~~~~~~~~~~l 386 (393) T protein:vir:10 359 IKYDYHWIPSLESLGLEQRVNDEYVVDL 386 (393) T ss_pred EEEEEEecCCcceEEEEEEEchHHHHHH Confidence 9999999999999999999998884433 No 26 >protein:vir:6079 Length: 396 # NCBI annotation: gpFI # Family: family:all:115 # MgeID: mge:126 # MgeName: WPhi # Cross-refs: genbank:acc:NP_878220;genbank:gi:33438919;genbank:GeneID:1457754 Probab=100.00 E-value=1.1e-73 Score=420.61 Aligned_cols=361 Identities=13% Similarity=0.085 Sum_probs=239.6 Q ss_pred hhhhhhhheecccceEEEEEEEEEeeeccccc-cccchhhheeeeecccccceeeeeecccccccccccccceeeeccCC Q lcl|Aclame:pro 334 VPVGFEGIYSVGDFTVIVNELTNVSIPVTDSA-IIPPMRFTRIEQITLSGGASFSVISNQPYGFNIQDSRHSYWLSPFKD 412 (742) Q Consensus 334 ip~al~aI~avg~~tv~v~~itnv~~p~tdsa-~vp~~~~~li~~~~l~~ga~~~vl~~~~~~~~i~~s~~~~~Ls~l~d 412 (742) .+ -|-+| +.+.++-...-|+.... .++. .+.......+..+. ...+..++...+ T Consensus 1 m~-----~~~~G---v~v~e~~~~~~~v~~~~tav~~----fvGta~~~~~~~~p-------------~~~p~~v~s~~~ 55 (396) T protein:vir:60 1 MS-----DYHHG---VQVLEINEGTRVISTVSTAIVG----MVCTASDADAEIFP-------------LNKPVLITNVQS 55 (396) T ss_pred CC-----CCCCC---eEEEEcCCCcccccccCceeEE----EEeccccccccccc-------------CccCeEeechHH Confidence 11 11122 11111100000000000 0000 00000000000000 000000110000 Q ss_pred cceeeecccccccccccceeEeecccccccccceeeeccCCcceEE-EecC------Ccccccc--ccccccccccchhh Q lcl|Aclame:pro 413 DELIIGTELVLPALDVSTEFGVSSWEEALPEFSFLMPFQGGSDGYI-RVDE------NEPDTIG--RVKITPALLANYER 483 (742) Q Consensus 413 ~s~~v~td~~a~a~d~s~~v~l~~~~~~~p~a~~av~l~gGtdg~i-~vd~------~~~~~ig--~~~~~~~~~a~rtG 483 (742) +..... ....+..+.......++...++ .+.. ....... .........+..+| T Consensus 56 ---------~~~~~g---------~~~tl~~a~~~~~~~gg~~~~vv~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~tg 117 (396) T protein:vir:60 56 ---------AIAKAG---------KKGTLAASLQAIADQSKPVTVVVRVEDGTGEDEETKLAQTVSNIIGTTDENGQYTG 117 (396) T ss_pred ---------HHHhhc---------CcchhHHHHHHHhhccCceEEEEecccccccccccccccccccccccccccccccc Confidence 000000 0001111111111111111110 0000 0000000 00111112346778 Q ss_pred HHHhhccCC-----ccEEEEcCCCchHHHHHHHHHHHhhcCceEEEEECCCCCChHHHHHHHHhccCCcEEEEEecceee Q lcl|Aclame:pro 484 LLPLLTEDQ-----FDLVLTPYLTFADHAGTVNAFINRAENRFLYLFDIAGDDDTENLAISLAGYINSSFATTFFPWVRR 558 (742) Q Consensus 484 L~AL~~~d~-----v~LL~aPg~t~s~v~aal~Al~a~a~~R~~aI~D~p~~~~t~~~A~a~r~~~~S~~aaL~~PwVkv 558 (742) +++|++... +.++++||.++..++.++.++|+.+ ++.+++|+|.+. +.+.+.+++++++|+|+++||||++. T Consensus 118 ~~al~~~~~~~~~~~~il~ap~~~~~~v~~al~~~~~~~--~~~~i~d~p~~~-~~~~a~~~~~~~~s~~~~~~~p~~~~ 194 (396) T protein:vir:60 118 LKALLAAESVTGVKPRILGVPGLDTKEVAVALASVCQKL--RAFGYISAWGCK-TISEVKAYRQNFSQRELMVIWPDFLA 194 (396) T ss_pred hhhhhhcccceeeeeeeccccccccHHHHHHHHHHhccC--CeEEEEeCCCCC-CHHHHHHHHhhcCCceEEEEeCceee Confidence 888887654 3688999999888989888888764 456778888664 45668899999999999999999998 Q ss_pred ccc--cceeEechHHHHHHHHhhhccCceeecCCceeeEeeecc----------ccchhHHhhhcCCceEEEEcCCCEEE Q lcl|Aclame:pro 559 LTN--KGMRTVPASLAAYRSIRTTDPETGLAPVGARRGVVTGEP----------VRQVDWEDLYNNRINPIVRVGNDVLL 626 (742) Q Consensus 559 ~d~--~~~~~vPpSgavAGl~ArtD~e~Gv~~SPaN~~I~~~~~----------ls~sE~d~LN~~GINtI~~fg~G~rl 626 (742) .|+ +..+++|||+++||++||+|.++|+|+||+|+.+.+... ....|++.||++|||++++ ++|+++ T Consensus 195 ~d~~~~~~~~~p~s~~~AG~~a~~d~~~g~~~spaN~~l~gi~~~~~~~~~~~~~~~~~~~~Ln~~gI~~~~~-~~G~~~ 273 (396) T protein:vir:60 195 WDTVASTTATAYATARALGLRAKIDQEQGWHKTLSNVGVNGVTGISASVFWDLQESGTDADLLNESGVTTLIR-RDGFRF 273 (396) T ss_pred ecccCCceeEEchhHHHHHHHHHhhhccCcEeCcCCceecceeeceeecccccCCCcchhhhhhhcCcEEEEc-CCCEEE Confidence 774 557889999999999999999999999999987655432 3467899999999999987 579999 Q ss_pred EcceecCCCccccceeehhhhhHHHHHHHHHHHHHhhcccCCHHHHHHHHHHHHHHHHHHHhCCceeeEEEEEcC-CCCH Q lcl|Aclame:pro 627 FGQKTMLNVNSALNRINVRRLLIVMRNRISQILSSYLFENNTSENRLRAEALVRQYLESLRLRGAVTDYEVAIDS-VTTP 705 (742) Q Consensus 627 WGnRTlas~D~~wrfInVRR~~d~Ie~sI~~a~~~~VfEPNd~~l~~~V~~sInafL~~L~~~GAL~Gf~V~~De-tNtp 705 (742) ||+||+ +.|++|+||++||+++||+++|++.++|+||||||+.+|++++++|++||++||++|+|.||+|+||+ +||+ T Consensus 274 wG~rT~-~~d~~~~~i~~rR~~~~i~~~i~~~~~~~v~e~n~~~~~~~i~~~i~~~l~~l~~~gal~g~~~~~d~~~nt~ 352 (396) T protein:vir:60 274 WGNRTC-SDDPLFLFENYTRTAQVLADTMAEAHMWAVDKPITATLIRDIVDGINAKFRELKTNGYIVDATCWFSEESNDA 352 (396) T ss_pred Eccccc-CCCcccceeehhhHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCceeceEEEEecCCCCH Confidence 999998 56899999999999999999999999999999999999999999999999999999999999999995 5889 Q ss_pred HHhhCCEEEEEEEEEecCCceEEEEEEEEeeceeecC Q lcl|Aclame:pro 706 TDIDNNTLRARVTVQPARSIEYIDITFVITPTGVEIT 742 (742) Q Consensus 706 ~dI~~GrL~i~I~vaP~~PAEfI~l~f~it~tG~~fs 742 (742) ++|++|+|+++|+++|++|||||+++++++..+.+-- T Consensus 353 ~~i~~G~~~~~i~~~p~~pae~I~~~~~~~~~~~~~~ 389 (396) T protein:vir:60 353 ETLKAGKLYIDYDYTPVPPLENLTLRQRITDKYLANL 389 (396) T ss_pred HHhhCCEEEEEEEEEecCCcceEEEEEEEchHHHHHH Confidence 9999999999999999999999999999998875532 No 27 >protein:vir:79141 Length: 391 # NCBI annotation: major tail seath protein gpFI # Family: family:all:115 # MgeID: mge:1863 # MgeName: RSA1 # Cross-refs: genbank:acc:YP_001165276;genbank:gi:145708101;genbank:GeneID:5247152 Probab=100.00 E-value=1.7e-73 Score=419.55 Aligned_cols=361 Identities=14% Similarity=0.066 Sum_probs=244.0 Q ss_pred hhhheecccceEEEEEEEEEeeeccccccccchhhheeeeecccccceeeeeeccccc-c-cccccccceeeeccCCcce Q lcl|Aclame:pro 338 FEGIYSVGDFTVIVNELTNVSIPVTDSAIIPPMRFTRIEQITLSGGASFSVISNQPYG-F-NIQDSRHSYWLSPFKDDEL 415 (742) Q Consensus 338 l~aI~avg~~tv~v~~itnv~~p~tdsa~vp~~~~~li~~~~l~~ga~~~vl~~~~~~-~-~i~~s~~~~~Ls~l~d~s~ 415 (742) +..-|.+|. .+.++....-|+. ........+...... . .......+..++... T Consensus 1 M~~~~~pGv---~v~e~~~~~~~i~------------------~~~tav~~~vg~a~~a~~~~~p~n~pv~iss~~---- 55 (391) T protein:vir:79 1 MPTDYHHGV---RVVELNDGTRPIR------------------TIETAVAGIVCTADDADAATFPLDTPVLLTNPQ---- 55 (391) T ss_pred CCCCCCCCe---EEEECCCCccccc------------------ccCCceEEEEeecccccccccccccCEEeccHH---- Confidence 221111111 1111000000000 000000000000000 0 000000000011000 Q ss_pred eeecccccccccccceeEeecccccccccceeeeccCCcceE-EEecCCcccccccccccc--ccccchhhHHHhhccCC Q lcl|Aclame:pro 416 IIGTELVLPALDVSTEFGVSSWEEALPEFSFLMPFQGGSDGY-IRVDENEPDTIGRVKITP--ALLANYERLLPLLTEDQ 492 (742) Q Consensus 416 ~v~td~~a~a~d~s~~v~l~~~~~~~p~a~~av~l~gGtdg~-i~vd~~~~~~ig~~~~~~--~~~a~rtGL~AL~~~d~ 492 (742) .........+.+..+.......++...+ +.+..............+ ...+.++|++++++.+. T Consensus 56 --------------~~~~~~g~~gtl~~al~~~~~~gg~~~~vv~~~~~~~~~~~~~~~~g~~~~~~~~tGl~~l~~~~~ 121 (391) T protein:vir:79 56 --------------AYIGKAGDKGTLAHTLDAITDQTNPLTVVVRVAGGASEAETTSNLIGTTNAAGRYTGMKALLTARN 121 (391) T ss_pred --------------HHHHhcCCccccchhhhhhhcccccceeeeccccccccccccccccccccchhhhHHHhhhhhhhh Confidence 0000011111222221112222222222 122222211222222111 12456889999887754 Q ss_pred -----ccEEEEcCCCchHHHHHHHHHHHhhcCceEEEEECCCCCChHHHHHHHHhccCCcEEEEEecceeeccc--ccee Q lcl|Aclame:pro 493 -----FDLVLTPYLTFADHAGTVNAFINRAENRFLYLFDIAGDDDTENLAISLAGYINSSFATTFFPWVRRLTN--KGMR 565 (742) Q Consensus 493 -----v~LL~aPg~t~s~v~aal~Al~a~a~~R~~aI~D~p~~~~t~~~A~a~r~~~~S~~aaL~~PwVkv~d~--~~~~ 565 (742) +.++++|+.++..+++++.++|+.+ |..+++|+|... +.+.+.+++++++|+|+++||||++.+++ +..+ T Consensus 122 ~~~~~p~~l~~p~~~~~~v~~al~~~~~~~--~~~ai~d~p~~~-t~~~a~~~~~~~~s~~~a~~~P~~~~~d~~~~~~~ 198 (391) T protein:vir:79 122 RFGVAPRILAVPGLDSLPVGTELVTIAQKL--RAFAYLSAYGCQ-TKEEAVAYRSNFGQREAMVMWPDFVGWDTAANAET 198 (391) T ss_pred hhcccchhhcCCccchhHHHHHHHHHHhhc--CcEEEEECCCCC-CHHHHHHHHhccCCceeEEecceeeeecCcCCcee Confidence 3577889998888888888888765 455778888664 45668999999999999999999998875 4568 Q ss_pred EechHHHHHHHHhhhccCceeecCCceeeEeeecc----------ccchhHHhhhcCCceEEEEcCCCEEEEcceecCCC Q lcl|Aclame:pro 566 TVPASLAAYRSIRTTDPETGLAPVGARRGVVTGEP----------VRQVDWEDLYNNRINPIVRVGNDVLLFGQKTMLNV 635 (742) Q Consensus 566 ~vPpSgavAGl~ArtD~e~Gv~~SPaN~~I~~~~~----------ls~sE~d~LN~~GINtI~~fg~G~rlWGnRTlas~ 635 (742) ++|||+++||++||+|.++|+|+||+|+.+.+... ....|.+.||++||+|+++ ++||++||+||+ +. T Consensus 199 ~~p~s~~~AG~~a~~D~~~g~~~spaN~~l~gi~~~~~~~~~~~~~~~~~~~~Ln~~~I~t~~~-~~G~~~wG~rT~-~~ 276 (391) T protein:vir:79 199 TLWATARAVGLRAKIDNDTGWHKTLSNVAVGGVTGLSRDVFWDLQDPATDAGYLNANEVTTLVH-RDGYRFWGSRTC-SA 276 (391) T ss_pred eechHHHHHHHHHHhhhcccceeccCCceehhhhccccccccccccccchhhhhhhcCceEEEC-CCcEEEEccccc-CC Confidence 89999999999999999999999999998765432 2345778999999999976 589999999998 56 Q ss_pred ccccceeehhhhhHHHHHHHHHHHHHhhcccCCHHHHHHHHHHHHHHHHHHHhCCceeeEEEEEcC-CCCHHHhhCCEEE Q lcl|Aclame:pro 636 NSALNRINVRRLLIVMRNRISQILSSYLFENNTSENRLRAEALVRQYLESLRLRGAVTDYEVAIDS-VTTPTDIDNNTLR 714 (742) Q Consensus 636 D~~wrfInVRR~~d~Ie~sI~~a~~~~VfEPNd~~l~~~V~~sInafL~~L~~~GAL~Gf~V~~De-tNtp~dI~~GrL~ 714 (742) |++|+||++||++++|+++|+++++|++||||++.+|++|+++|++||++||++|+|.||+|+||+ +|+++++++|+|+ T Consensus 277 d~~~~~i~~rR~~~~i~~~i~~~~~~~v~epn~~~~~~~i~~~i~~~l~~l~~~g~l~g~~v~~~~~~nt~~~i~~G~~~ 356 (391) T protein:vir:79 277 DPLFAFENYTRTAQVLADTMAEAHMWANDLPMTPTLVRDLLEGINAKLRMLTRNGYLLGGAAWFDADANSKDTLKAGQLA 356 (391) T ss_pred CcccceeehhhHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCceeceEEEEecCCCCHHHhhCCEEE Confidence 899999999999999999999999999999999999999999999999999999999999999995 5889999999999 Q ss_pred EEEEEEecCCceEEEEEEEEeeceee--cC Q lcl|Aclame:pro 715 ARVTVQPARSIEYIDITFVITPTGVE--IT 742 (742) Q Consensus 715 i~I~vaP~~PAEfI~l~f~it~tG~~--fs 742 (742) ++|+++|++|+|||+++++++..+.+ |+ T Consensus 357 ~~i~~~p~~p~e~i~~~~~~~~~~~~~~~~ 386 (391) T protein:vir:79 357 IDYDYTPVPPLENLTFRQRITDRYLMQFAE 386 (391) T ss_pred EEEEEEecCCcceEEEEEEEchHHHHHHHH Confidence 99999999999999999999999876 44 No 28 >protein:vir:1172 Length: 391 # NCBI annotation: hypothetical protein # Family: family:all:115 # MgeID: mge:24 # MgeName: phi CTX # Cross-refs: genbank:acc:NP_490621;genbank:gi:17313241;genbank:GeneID:927300 Probab=100.00 E-value=9e-73 Score=415.56 Aligned_cols=363 Identities=15% Similarity=0.131 Sum_probs=241.3 Q ss_pred hhhh-eecccceEEEEEEEEEeeeccccccccchhhheeeeecccccceeeeeecccccccccccccceeeeccCCccee Q lcl|Aclame:pro 338 FEGI-YSVGDFTVIVNELTNVSIPVTDSAIIPPMRFTRIEQITLSGGASFSVISNQPYGFNIQDSRHSYWLSPFKDDELI 416 (742) Q Consensus 338 l~aI-~avg~~tv~v~~itnv~~p~tdsa~vp~~~~~li~~~~l~~ga~~~vl~~~~~~~~i~~s~~~~~Ls~l~d~s~~ 416 (742) +..- +-+|.. +.++-....++.. ......-.+.......+..+. ...+..++... T Consensus 1 M~~~~~~~GV~---v~e~~~~~~~i~~---v~tavig~vg~a~~a~~~~~~-------------~~~p~~v~s~~----- 56 (391) T protein:vir:11 1 MAADQYHHGVR---VQEINDGTRPIRT---IATAIIGLVATAEDADATAFP-------------LDTPVLITNVQ----- 56 (391) T ss_pred CCCCcCCCcEE---EEECCCCcceecc---cCCceeEEEEecCCCCCcccc-------------ccccEEEecch----- Confidence 1110 111111 1000000000000 000000000000000000000 00000000000 Q ss_pred eecccccccccccceeEeecccccccccceeeeccCCcceE-EEecCCcccccccccccc--ccccchhhHHHhhccCC- Q lcl|Aclame:pro 417 IGTELVLPALDVSTEFGVSSWEEALPEFSFLMPFQGGSDGY-IRVDENEPDTIGRVKITP--ALLANYERLLPLLTEDQ- 492 (742) Q Consensus 417 v~td~~a~a~d~s~~v~l~~~~~~~p~a~~av~l~gGtdg~-i~vd~~~~~~ig~~~~~~--~~~a~rtGL~AL~~~d~- 492 (742) ...........+..........++...+ ..+....+...+.....+ ...+.++|++++++... T Consensus 57 -------------~~~~~~g~~~tl~~al~~~~~~~g~~~~vv~~~~~~~~~~t~~d~~g~~~a~~~~~g~~a~~~~~~~ 123 (391) T protein:vir:11 57 -------------AAIGKAGTSGTLPASLQAIADQANAATVVVRVKPGEDEAATNSAVIGGVSADGKYTGMKALLAAKAR 123 (391) T ss_pred -------------hhheecCCCccchhhhhhhhccccceeEEeeecccccccccchhhhcccccccchhhhhhhhhhhhh Confidence 0001111111122211112222222221 122222222222222111 12346778888876543 Q ss_pred ----ccEEEEcCCCchHHHHHHHHHHHhhcCceEEEEECCCCCChHHHHHHHHhccCCcEEEEEecceeeccc--cceeE Q lcl|Aclame:pro 493 ----FDLVLTPYLTFADHAGTVNAFINRAENRFLYLFDIAGDDDTENLAISLAGYINSSFATTFFPWVRRLTN--KGMRT 566 (742) Q Consensus 493 ----v~LL~aPg~t~s~v~aal~Al~a~a~~R~~aI~D~p~~~~t~~~A~a~r~~~~S~~aaL~~PwVkv~d~--~~~~~ 566 (742) +.++.+|++++..+++++.++|+.+ ++++++|+|.+. +.+.+.+|+++++|+|+++||||++..++ +..++ T Consensus 124 ~~~~p~~~~ap~~~~~~v~~al~~~~~~~--~~~~i~D~p~~~-t~~~a~~~r~~~~s~~~~~~~p~~~~~~~~~~~~~~ 200 (391) T protein:vir:11 124 LGVVPRILGVPGLDTQPVATALIAIAQQL--RAFAYVSASGCK-TKEEATAYRENFAAREAMVIWPDFLTWSTVVNQTVP 200 (391) T ss_pred heeccccccccccccHHHHHHHHHhhccc--ceEEEEEcCCCC-CHHHHHHHhhhcCCceEEEEcCcceecccccCceEE Confidence 3678899999988998888888764 566778887664 45678899999999999999999998774 45678 Q ss_pred echHHHHHHHHhhhccCceeecCCceeeEeeecc----------ccchhHHhhhcCCceEEEEcCCCEEEEcceecCCCc Q lcl|Aclame:pro 567 VPASLAAYRSIRTTDPETGLAPVGARRGVVTGEP----------VRQVDWEDLYNNRINPIVRVGNDVLLFGQKTMLNVN 636 (742) Q Consensus 567 vPpSgavAGl~ArtD~e~Gv~~SPaN~~I~~~~~----------ls~sE~d~LN~~GINtI~~fg~G~rlWGnRTlas~D 636 (742) +|||+++||++||+|.++|+|+||+|+.+.+... ..+.|++.||++||+++++ ++||++||+||+ +.| T Consensus 201 ~p~s~~~ag~~a~~d~~~g~~~span~~l~gi~~~~~~~~~~~~~~~~~~~~Ln~~gi~~~~~-~~G~~~wG~rT~-~~d 278 (391) T protein:vir:11 201 APAVAQALGLRARIDQEVGWHKTLSNVAVNGVTGISADVFWDLQSPSTDANYLNENEVTTLVQ-EGGFRFWGSRTC-SDD 278 (391) T ss_pred echHHHHHHHHHHhhccCCcEEccCCceeeceeecccccccccCCCcchhhhhhhcCcEEEEc-CCCEEEEccccc-CCC Confidence 9999999999999999999999999987654432 2467889999999999976 579999999998 568 Q ss_pred cccceeehhhhhHHHHHHHHHHHHHhhcccCCHHHHHHHHHHHHHHHHHHHhCCceeeEEEEEcC-CCCHHHhhCCEEEE Q lcl|Aclame:pro 637 SALNRINVRRLLIVMRNRISQILSSYLFENNTSENRLRAEALVRQYLESLRLRGAVTDYEVAIDS-VTTPTDIDNNTLRA 715 (742) Q Consensus 637 ~~wrfInVRR~~d~Ie~sI~~a~~~~VfEPNd~~l~~~V~~sInafL~~L~~~GAL~Gf~V~~De-tNtp~dI~~GrL~i 715 (742) ++|+||++||+++||+++|++.++|++||||++.+|++|+++|+.||++||++|+|+||+|+||+ +|++++|++|+|++ T Consensus 279 ~~~~~i~vrR~~~~i~~~~~~~~~~~v~e~n~~~~~~~i~~~i~~~l~~l~~~g~l~g~~~~~~~~~n~~~~i~~G~~~~ 358 (391) T protein:vir:11 279 PLFAFENYTRTAQVLADTIAEAHMWAVDKPMHPSLVRDILEGVNAKFRELKGLGLIIDAQAWYDPNVNDKDTLKAGKLRI 358 (391) T ss_pred cccceeehhhHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhccceeceEEEEecCCCCHHHhhCCeEEE Confidence 99999999999999999999999999999999999999999999999999999999999999995 58889999999999 Q ss_pred EEEEEecCCceEEEEEEEEeeceeecC Q lcl|Aclame:pro 716 RVTVQPARSIEYIDITFVITPTGVEIT 742 (742) Q Consensus 716 ~I~vaP~~PAEfI~l~f~it~tG~~fs 742 (742) +|+++|++|+|||++++.++..+.+-- T Consensus 359 ~i~~~p~~p~e~i~~~~~~~~~~~~~~ 385 (391) T protein:vir:11 359 TYDYTPVPPLEDLTFFQKITDSYLVDF 385 (391) T ss_pred EEEEEecCCcceEEEEEEEchHHHHHH Confidence 999999999999999999988883221 No 29 >protein:vir:2035 Length: 396 # NCBI annotation: gpFI # Family: family:all:115 # MgeID: mge:315 # MgeName: P2 # Cross-refs: genbank:acc:NP_046778;genbank:gi:9630349;genbank:GeneID:1261516 Probab=100.00 E-value=5.1e-73 Score=416.93 Aligned_cols=361 Identities=12% Similarity=0.068 Sum_probs=240.9 Q ss_pred hhhheecccceEEEEEEEEEeeecccc-ccccchhhheeeeecccccceeeeeecccccccccccccceeeeccCCccee Q lcl|Aclame:pro 338 FEGIYSVGDFTVIVNELTNVSIPVTDS-AIIPPMRFTRIEQITLSGGASFSVISNQPYGFNIQDSRHSYWLSPFKDDELI 416 (742) Q Consensus 338 l~aI~avg~~tv~v~~itnv~~p~tds-a~vp~~~~~li~~~~l~~ga~~~vl~~~~~~~~i~~s~~~~~Ls~l~d~s~~ 416 (742) +.. |.+|-....+.. ...|+..- ..++. .+...+...+..+.+ ..+..++...+... T Consensus 1 m~~-~~~GV~v~e~~~---g~~~i~~v~tav~~----~vg~a~~a~~~~~~l-------------~~pvlvts~~~~~~- 58 (396) T protein:vir:20 1 MSD-YHHGVQVLEINE---GTRVISTVSTAIVG----MVCTASDADAETFPL-------------NKPVLITNVQSAIS- 58 (396) T ss_pred CCC-CCCCeEEEEcCC---CcceeeecCCceeE----EEeeeccCCCccccC-------------ccCEEeechHHHHh- Confidence 111 223221111110 00000000 00000 000001111111100 00000110000000 Q ss_pred eecccccccccccceeEeecccccccccceeeeccCCcceEEEec-------CCccccc--cccccccccccchhhHHHh Q lcl|Aclame:pro 417 IGTELVLPALDVSTEFGVSSWEEALPEFSFLMPFQGGSDGYIRVD-------ENEPDTI--GRVKITPALLANYERLLPL 487 (742) Q Consensus 417 v~td~~a~a~d~s~~v~l~~~~~~~p~a~~av~l~gGtdg~i~vd-------~~~~~~i--g~~~~~~~~~a~rtGL~AL 487 (742) ..+....++.........++...++... ....... ..........+.++|++++ T Consensus 59 -----------------~~g~~~tL~~al~~~~~ngg~~~~v~~~~~~~~~~~~~~~a~t~~~~~~~~~~~~~~tg~~al 121 (396) T protein:vir:20 59 -----------------KAGKKGTLAASLQAIADQSKPVTVVMRVEDGTGDDEETKLAQTVSNIIGTTDENGQYTGLKAM 121 (396) T ss_pred -----------------hcccccchhhhhhhhhccCceeEEEEeccccccccccccccccccccccccccccccchhhhh Confidence 0000111111111111111111111000 0000000 0011111224567899999 Q ss_pred hccCCc-----cEEEEcCCCchHHHHHHHHHHHhhcCceEEEEECCCCCChHHHHHHHHhccCCcEEEEEecceeeccc- Q lcl|Aclame:pro 488 LTEDQF-----DLVLTPYLTFADHAGTVNAFINRAENRFLYLFDIAGDDDTENLAISLAGYINSSFATTFFPWVRRLTN- 561 (742) Q Consensus 488 ~~~d~v-----~LL~aPg~t~s~v~aal~Al~a~a~~R~~aI~D~p~~~~t~~~A~a~r~~~~S~~aaL~~PwVkv~d~- 561 (742) ++.+.. .++++|++++..++.++.++|+.+ +.++++|+|.+.+ .+++.+|+++++|+|+++||||+++.|+ T Consensus 122 ~~~~~~~~~~p~i~~ap~~~~~~v~~al~~~~~~~--~~~~~iD~p~~~~-~~~a~~~r~~~~s~~~~~~~P~~~~~d~~ 198 (396) T protein:vir:20 122 LAAESVTGVKPRILGVPGLDTKEVAVALASVCQKL--RAFGYISAWGCKT-ISEVKAYRQNFSQRELMVIWPDFLAWDTV 198 (396) T ss_pred hhhccccccchhhhhhhhhccHHHHHHHHHHHhcC--CcEEEEecCCCCC-HHHHHHHhhCCCCceEEEEcCccccccCc Confidence 876543 578899999888998888888764 4566788887654 4568899999999999999999999875 Q ss_pred -cceeEechHHHHHHHHhhhccCceeecCCceeeEeeecc----------ccchhHHhhhcCCceEEEEcCCCEEEEcce Q lcl|Aclame:pro 562 -KGMRTVPASLAAYRSIRTTDPETGLAPVGARRGVVTGEP----------VRQVDWEDLYNNRINPIVRVGNDVLLFGQK 630 (742) Q Consensus 562 -~~~~~vPpSgavAGl~ArtD~e~Gv~~SPaN~~I~~~~~----------ls~sE~d~LN~~GINtI~~fg~G~rlWGnR 630 (742) +..+++|||+++||++||+|.++|+|+||+|+.+.+... ..++|++.||++|||++++ ++||++||+| T Consensus 199 ~~~~~~~p~s~~~Ag~~a~~d~~~g~~~spaN~~l~gi~~~~~~~~~~~~~~~~~~~~Ln~~gi~~~~~-~~G~~~wG~r 277 (396) T protein:vir:20 199 TSTTATAYATARALGLRAKIDQEQGWHKTLSNVGVNGVTGISASVFWDLQESGTDADLLNESGVTTLIR-RDGFRFWGNR 277 (396) T ss_pred CCcceeechhHHHHHHHHHhhhhcCcEeccCCceeccceecceecccccCCCcchhhhhhhcCcEEEEc-CCCEEEEccc Confidence 456789999999999999999999999999997655432 3467899999999999987 5799999999 Q ss_pred ecCCCccccceeehhhhhHHHHHHHHHHHHHhhcccCCHHHHHHHHHHHHHHHHHHHhCCceeeEEEEEcC-CCCHHHhh Q lcl|Aclame:pro 631 TMLNVNSALNRINVRRLLIVMRNRISQILSSYLFENNTSENRLRAEALVRQYLESLRLRGAVTDYEVAIDS-VTTPTDID 709 (742) Q Consensus 631 Tlas~D~~wrfInVRR~~d~Ie~sI~~a~~~~VfEPNd~~l~~~V~~sInafL~~L~~~GAL~Gf~V~~De-tNtp~dI~ 709 (742) |+ +.|++|+||++||+++||+++|++.++|++||||++.+|++|++++++||++||++|+|+||+|+||+ +|++++|+ T Consensus 278 T~-s~d~~~~~i~~rR~~~~i~~~~~~~~~~~v~e~~~~~~~~~i~~~i~~~L~~l~~~G~l~g~~v~~d~~~nt~~~i~ 356 (396) T protein:vir:20 278 TC-SDDPLFLFENYTRTAQVVADTMAEAHMWAVDKPITATLIRDIVDGINAKFRELKTNGYIVDATCWFSEESNDAETLK 356 (396) T ss_pred cc-CCCcccceeehhhHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCcceeceEEEEecCCCCHHHhh Confidence 98 56899999999999999999999999999999999999999999999999999999999999999995 58889999 Q ss_pred CCEEEEEEEEEecCCceEEEEEEEEeeceeecC Q lcl|Aclame:pro 710 NNTLRARVTVQPARSIEYIDITFVITPTGVEIT 742 (742) Q Consensus 710 ~GrL~i~I~vaP~~PAEfI~l~f~it~tG~~fs 742 (742) +|+|+++|+++|++|+|||+|++.++..+.+-- T Consensus 357 ~G~~~~~i~~~p~~p~e~i~~~~~~~~~~~~~~ 389 (396) T protein:vir:20 357 AGKLYIDYDYTPVPPLENLTLRQRITDKYLANL 389 (396) T ss_pred CCEEEEEEEEEecCCcceEEEEEEEchHHHHHH Confidence 999999999999999999999999988875422 No 30 >protein:vir:96740 Length: 388 # NCBI annotation: phage tail sheath protein FI-like # Family: family:all:115 # MgeID: mge:1628 # MgeName: VP882 # Cross-refs: genbank:acc:YP_001039839;genbank:gi:126010913;genbank:GeneID:5076250 Probab=100.00 E-value=1.6e-71 Score=408.75 Aligned_cols=359 Identities=11% Similarity=0.028 Sum_probs=234.7 Q ss_pred hhhh--eecccceEEEEEEEEEeeeccccccccchhhheeeeecccccceeeeeecccccccccccccceeeeccCCcce Q lcl|Aclame:pro 338 FEGI--YSVGDFTVIVNELTNVSIPVTDSAIIPPMRFTRIEQITLSGGASFSVISNQPYGFNIQDSRHSYWLSPFKDDEL 415 (742) Q Consensus 338 l~aI--~avg~~tv~v~~itnv~~p~tdsa~vp~~~~~li~~~~l~~ga~~~vl~~~~~~~~i~~s~~~~~Ls~l~d~s~ 415 (742) +..+ |.||.. +.++.....|+....+ .....+.......+. +. ...+..+....+... T Consensus 1 m~~~~~~~hGv~---v~ev~~g~~~i~~~~t---avi~~Vgta~~ad~~-~p-------------~~~~~~i~~~~d~~~ 60 (388) T protein:vir:96 1 MPVIDQFEHNGI---SIETHEPPPPMGPPGD---NVVAWVVTAPDKHAD-VA-------------FSVPFRVANTADAQY 60 (388) T ss_pred CCCCCCCCCceE---EEEcCCCcccccccCc---ceeEEEEecCCCccc-cc-------------cccceeeecchhhhh Confidence 2221 223321 1111111111110000 000000000000000 00 000000000000000 Q ss_pred eeecccccccccccceeEeecccccccccceeeeccCCcc-eEEEecCCccccccccc---cccccccchhhHHHhhccC Q lcl|Aclame:pro 416 IIGTELVLPALDVSTEFGVSSWEEALPEFSFLMPFQGGSD-GYIRVDENEPDTIGRVK---ITPALLANYERLLPLLTED 491 (742) Q Consensus 416 ~v~td~~a~a~d~s~~v~l~~~~~~~p~a~~av~l~gGtd-g~i~vd~~~~~~ig~~~---~~~~~~a~rtGL~AL~~~d 491 (742) + .........+..+.......++.. ....+............ ..+...+.++|+++++..+ T Consensus 61 ~---------------~~~~~~~gtl~~al~~~~~~~~~~~~vv~v~~g~~~~at~a~iig~~~~~tg~~~gl~al~~~~ 125 (388) T protein:vir:96 61 L---------------DSTGNELGTGWHAASETLKKTSVPQYFIVVPEGADDAATMANIIGGIDPTTGRRTGIAALTECT 125 (388) T ss_pred h---------------hccccccccchhhhHhhhccCCceEEEEEeccccccccccceeeeecccccchhhHHHHhhhcc Confidence 0 000000111111111111112211 11222222222222222 2222345688999998875 Q ss_pred C-ccEEEEcCCCch-HHHHHHHHHHHhhcCceEEEEECCCCCChHHHH-H--HHHhccCCcEEEEEecceeeccc--cce Q lcl|Aclame:pro 492 Q-FDLVLTPYLTFA-DHAGTVNAFINRAENRFLYLFDIAGDDDTENLA-I--SLAGYINSSFATTFFPWVRRLTN--KGM 564 (742) Q Consensus 492 ~-v~LL~aPg~t~s-~v~aal~Al~a~a~~R~~aI~D~p~~~~t~~~A-~--a~r~~~~S~~aaL~~PwVkv~d~--~~~ 564 (742) . ++||++||+++. .+++++.++|+.+ |+++++|+|.+....... . ....+++|+|+++||||+++.|+ +.. T Consensus 126 ~~p~il~aPg~s~~~~v~~al~~~~~~~--~~~~i~D~p~~~~~~~~~~~~~~~~~~~~s~~~~~~~P~~~~~d~~~~~~ 203 (388) T protein:vir:96 126 ERPTLIGAPGFSQNKAVIDALASMAKRL--KCRAVIDGPSGSTQDAIDLSGLLGGEGTGHDRVYMVDPMPAIYSRKAQGN 203 (388) T ss_pred cceeEEEeeccccchHHHHHHHHHHhhc--CcEEEEeccCCchhHHHHHHhhhhccCcCcceEEEEeCceeeecccCCce Confidence 4 489999998764 6778888888765 567888998765433211 1 22346889999999999998875 456 Q ss_pred eEechHHHHHHHHhhhccCceeecCCceeeEe--ee-------ccccchhHHhhhcCCceEEEEc-CCCEEEEcceecCC Q lcl|Aclame:pro 565 RTVPASLAAYRSIRTTDPETGLAPVGARRGVV--TG-------EPVRQVDWEDLYNNRINPIVRV-GNDVLLFGQKTMLN 634 (742) Q Consensus 565 ~~vPpSgavAGl~ArtD~e~Gv~~SPaN~~I~--~~-------~~ls~sE~d~LN~~GINtI~~f-g~G~rlWGnRTlas 634 (742) +++|||+++||++||+|. |+||+|+.+. +. ....++|++.||++|||||++| ++|+++||+||++ T Consensus 204 ~~~p~s~~~AG~~a~~D~----~~spaN~~i~i~g~~~~~~~~~~~~~~~~~~Ln~~gI~~i~~~~~~G~~~wG~rT~~- 278 (388) T protein:vir:96 204 IYVPPSTIAMGAVAAVKP----WESPGNQGVLIQDVARVIDYNILDKSTEGDLLNRNGVSYFARTSMGGFSLIGNRTVT- 278 (388) T ss_pred eeechHHHHHHHHHhhcC----cccccCeeEEeeeecccccccccCChhhHHhhhhcCceEEEEecCCcEEEEcccccC- Confidence 889999999999999994 9999998662 21 1235688999999999999998 6899999999983 Q ss_pred CccccceeehhhhhHHHHHHHHHHHHHhhcccCCHHHHHHHHHHHHHHHHHHHhCCceeeEEEEEcCC-CCHHHhhCCEE Q lcl|Aclame:pro 635 VNSALNRINVRRLLIVMRNRISQILSSYLFENNTSENRLRAEALVRQYLESLRLRGAVTDYEVAIDSV-TTPTDIDNNTL 713 (742) Q Consensus 635 ~D~~wrfInVRR~~d~Ie~sI~~a~~~~VfEPNd~~l~~~V~~sInafL~~L~~~GAL~Gf~V~~Det-Ntp~dI~~GrL 713 (742) |+||++||+++||+++|++.++|+||||||+.+|.+|+++|++||++||++|+|.||+++||++ |++++|++|+| T Consensus 279 ----~~~i~vrR~~~~i~~si~~~~~~~v~epn~~~~~~~i~~~i~~fL~~l~~~Gal~g~~~~~d~~~nt~~~i~~G~~ 354 (388) T protein:vir:96 279 ----GKFISFVGLEDAIARKLEAASQRAMSKQLTKSFMEQEIKKINLFMQDLVAAEIIPGGEVYLHPTLNTVERYKNGSW 354 (388) T ss_pred ----CcceeehhhHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeEEEEecCCCCHHHhhCCEE Confidence 9999999999999999999999999999999999999999999999999999999999999954 88899999999 Q ss_pred EEEEEEEecCCceEEEEEEEEeeceee--cC Q lcl|Aclame:pro 714 RARVTVQPARSIEYIDITFVITPTGVE--IT 742 (742) Q Consensus 714 ~i~I~vaP~~PAEfI~l~f~it~tG~~--fs 742 (742) +++|+++|++|+|||+|++.++....+ |+ T Consensus 355 ~~~i~~~p~~pae~I~~~~~~~~~~~~~~~~ 385 (388) T protein:vir:96 355 YIVIDYGRYSPNEHMIFHLNAVDRIVEEFIE 385 (388) T ss_pred EEEEEEEecCCcceEEEEEEEchHHHHHHHH Confidence 999999999999999999999999988 66 No 31 >protein:vir:10336 Length: 386 # NCBI annotation: ORF39 # Family: family:all:115 # MgeID: mge:182 # MgeName: VHML # Cross-refs: genbank:acc:NP_758931;genbank:gi:27311206;genbank:GeneID:956116 Probab=100.00 E-value=2.3e-70 Score=402.38 Aligned_cols=362 Identities=15% Similarity=0.125 Sum_probs=231.2 Q ss_pred hhhheecccceEEEEEEEEEeeeccccccccchhhheeeeecccccceeeeeecccccccccccccceeeeccCCcceee Q lcl|Aclame:pro 338 FEGIYSVGDFTVIVNELTNVSIPVTDSAIIPPMRFTRIEQITLSGGASFSVISNQPYGFNIQDSRHSYWLSPFKDDELII 417 (742) Q Consensus 338 l~aI~avg~~tv~v~~itnv~~p~tdsa~vp~~~~~li~~~~l~~ga~~~vl~~~~~~~~i~~s~~~~~Ls~l~d~s~~v 417 (742) +..-|.+|. .+.++.....|.....+ .....+...+...+..+++ .....++...+ T Consensus 1 M~~~~~~Gv---~v~ev~~~~~~i~~v~t---av~~~vg~a~~a~~~~~~~-------------~~pv~i~s~~~----- 56 (386) T protein:vir:10 1 MAEQYLHGA---EVVEIDNGARPIRTAQS---GVIGLVGTAPDADATAFPL-------------NTPVLIAGSRR----- 56 (386) T ss_pred CccccCCCe---EEEEcCCCcccccccCc---ceeEEEEecCCCCCccccc-------------ccceEecchHH----- Confidence 444444442 21111100000100000 0000000000000000000 00000000000 Q ss_pred ecccccccccccceeEeecccccccccceeeeccCCcceEE-EecCCcccccccc---ccccccccchhhHHHhhccCC- Q lcl|Aclame:pro 418 GTELVLPALDVSTEFGVSSWEEALPEFSFLMPFQGGSDGYI-RVDENEPDTIGRV---KITPALLANYERLLPLLTEDQ- 492 (742) Q Consensus 418 ~td~~a~a~d~s~~v~l~~~~~~~p~a~~av~l~gGtdg~i-~vd~~~~~~ig~~---~~~~~~~a~rtGL~AL~~~d~- 492 (742) ..........++.+.......+|...+. .+....+...... +........++|+.++..... T Consensus 57 -------------~~~~~g~~~tl~~a~~~~~~~gg~~~~vv~~~~~~~~~~t~~~~ig~~~~~t~~~tgl~~l~~~~~~ 123 (386) T protein:vir:10 57 -------------EAAKLGAGGTLPQAIDGIFDQTGAVVVVIRVDEGVDSAATQSNVIGKVDADTEQYTGILALLSAENT 123 (386) T ss_pred -------------HHhhcCCCcchhHHHHHHhccCceeEEEeeccccccccccchhhhcccccccchhhhhHHhhhhccc Confidence 0000111112222222222222222211 1111111111111 122223346789988877643 Q ss_pred ----ccEEEEcCCCchH-HHHHHHHHHHhhcCceEEEEECCCCCChHHHHHHHHhccCCcEEEEEecceeeccc--ccee Q lcl|Aclame:pro 493 ----FDLVLTPYLTFAD-HAGTVNAFINRAENRFLYLFDIAGDDDTENLAISLAGYINSSFATTFFPWVRRLTN--KGMR 565 (742) Q Consensus 493 ----v~LL~aPg~t~s~-v~aal~Al~a~a~~R~~aI~D~p~~~~t~~~A~a~r~~~~S~~aaL~~PwVkv~d~--~~~~ 565 (742) +.++.+|++++.. +.+.+...| ++..++...+...++.+.+.+++..++|+|+++||||+++.++ +..+ T Consensus 124 ~~~~p~i~~ap~~~~~~~v~~~l~~~~----~~~~~~~~~~~~~~~~~~a~~~~~~~~s~~~~~~~p~~~v~~~~~~~~~ 199 (386) T protein:vir:10 124 VKVQPRILIAPGFSNQKAVADQLVSVA----DTAAWLCHSGWSNTTDAAAITYRELFGSRRCEVVDPWYKVWDVETSAHI 199 (386) T ss_pred ccccccccccccccchhHHHHHHHHhh----cceEEEEEeCCCCCchHHHHHhhhcccccceEEecCceeeeccccccce Confidence 3566777765432 222222222 3333333233334456678899999999999999999998875 4567 Q ss_pred EechHHHHHHHHhhhccCceeecCCceeeEeeecc----------ccchhHHhhhcCCceEEEEcCCCEEEEcceecCCC Q lcl|Aclame:pro 566 TVPASLAAYRSIRTTDPETGLAPVGARRGVVTGEP----------VRQVDWEDLYNNRINPIVRVGNDVLLFGQKTMLNV 635 (742) Q Consensus 566 ~vPpSgavAGl~ArtD~e~Gv~~SPaN~~I~~~~~----------ls~sE~d~LN~~GINtI~~fg~G~rlWGnRTlas~ 635 (742) ++|||+++||++||+|.++|+|+||+|+.+.+... ..+.|++.||++||+++++ ++|+++||+||+ +. T Consensus 200 ~~p~s~~~ag~~a~~D~~~G~~~spaN~~l~gv~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~-~~G~~~wG~rT~-~~ 277 (386) T protein:vir:10 200 IQPPSARHAGVMAKVHNTLGFWWSNSNQEILGIDGLCRPVDFKLDDPTCRANLLNAKEVTTTIQ-QNGFRVWGDRTC-SA 277 (386) T ss_pred eechHHHHHHHHHHhhhcCCcEEccCCceeecccccceecccccccCcchhhhhhhcCcEEEEc-CCCEEEEccccc-CC Confidence 89999999999999999999999999997765432 3467899999999999975 689999999998 56 Q ss_pred ccccceeehhhhhHHHHHHHHHHHHHhhcccCCHHHHHHHHHHHHHHHHHHHhCCceeeEEEEEcC-CCCHHHhhCCEEE Q lcl|Aclame:pro 636 NSALNRINVRRLLIVMRNRISQILSSYLFENNTSENRLRAEALVRQYLESLRLRGAVTDYEVAIDS-VTTPTDIDNNTLR 714 (742) Q Consensus 636 D~~wrfInVRR~~d~Ie~sI~~a~~~~VfEPNd~~l~~~V~~sInafL~~L~~~GAL~Gf~V~~De-tNtp~dI~~GrL~ 714 (742) |++|+||++|||+++|+++|+++++|++||||++.+|++|+++|++||++||++|+|+||+|+||+ +|+++++++|+|+ T Consensus 278 d~~~~~i~vrR~~~~i~~~~~~~~~~~v~e~~~~~~~~~i~~~i~~~L~~l~~~g~l~g~~v~~d~~~nt~~~~~~G~~~ 357 (386) T protein:vir:10 278 DSKWAFKNVVITNDMIADSLVRNHLWAVDRNITKTYVEDVTEGVNNYLRHLKNIGAIAGGECWVDPELNSPDQIQQGKVY 357 (386) T ss_pred CcccceeehhhHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCceeeeEEEEcccCCCHHHhhCCeEE Confidence 899999999999999999999999999999999999999999999999999999999999999995 5888999999999 Q ss_pred EEEEEEecCCceEEEEEEEEeeceeecC Q lcl|Aclame:pro 715 ARVTVQPARSIEYIDITFVITPTGVEIT 742 (742) Q Consensus 715 i~I~vaP~~PAEfI~l~f~it~tG~~fs 742 (742) ++|+++|++|+|||++++.++..+.+=- T Consensus 358 ~~i~~~p~~p~e~i~~~~~~~~~~~~~~ 385 (386) T protein:vir:10 358 FDYDFSAYAPAEHITFRSHMVNGYLTEV 385 (386) T ss_pred EEEEEEecCCceeEEEEEEEehhHHHhh Confidence 9999999999999999998776663333 No 32 >protein:vir:98824 Length: 774 # NCBI annotation: putative phage tail sheath protein # Family: family:all:661 # MgeID: mge:1530 # MgeName: Ma-LMM01 # Cross-refs: genbank:acc:YP_851105;genbank:gi:117530262;genbank:GeneID:4484488 Probab=100.00 E-value=4.9e-65 Score=373.15 Aligned_cols=652 Identities=21% Similarity=0.237 Sum_probs=312.2 Q ss_pred CeeeeeeeeeeEeccccCCchhhheeeeecCCCCcccceeechhHHhh------------------ccc------ceeee Q lcl|Aclame:pro 1 MYRVNVKEVDLSITPEVGTPVQTALVGAFDLPIPSELPVSVTPDEFRR------------------VGS------TELSL 56 (742) Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------~~~------~~~~~ 56 (742) |-|--.-|. |..-|| |-||-|.-|------|.|.| .|| -.... T Consensus 1 ~~~~~~~~~------------~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 67 (774) T protein:vir:98 1 MARAPFIEF------------QDTNVG-FALPRPNVLNRIAIIDRFNRGPANILTYIGNFSDFAYRYGSDTSPGSLQYQA 67 (774) T ss_pred CCcCceeee------------ecccce-eecCCcchhhheeeeecccCChhhhhhhhccchhhheeccCCCCCcceehhh Confidence 665544332 222333 66777766654433444443 222 11122 Q ss_pred ehhhhcCc--ceEEEEc--cCCcccccceeEEEEecceeeehhhheeeeeeeecccCCC------ccc------ceeEEE Q lcl|Aclame:pro 57 IADSLVGG--QEVTVIR--PRGETQSLNAAFVVVGGYNVTLGAFNVFYLMFLGYDPQKG------YTD------VSYVDV 120 (742) Q Consensus 57 ~~~~~~~~--~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~------~~~~~~ 120 (742) .-|.+..- ..+.+.| -||...|..-.|--|.|.|-||....-|.--.|.-..+|. ++. ||.-| T Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 146 (774) T protein:vir:98 68 VYDQFANQDDANIALVRVTGRGRPASASLTFSGVAGVNNTLNIHTNFVGEVIAREDAPADIVWPMLTNTAVAPVVSSKE- 146 (774) T ss_pred hhhhhcCCCcCcEEEEEEecCCccccceeeeeeeccccceeeeehhhhhhhhcccCCccceehhhhccceecceecccc- Confidence 22322211 1233333 4666777777788888998888654333222222111111 111 11111 Q ss_pred EEccCCCeeEEEe--eec--C----CCcceeEEEE-----EeeceeEe--ecccceeeeeeeccccceEEEEeecCcccc Q lcl|Aclame:pro 121 QLAGTPTDTILFS--YSL--D----GSSTTHSLTI-----NLNAPSVT--LPSNIVPLFFYYEPYTGSITLQSSVNYSGL 185 (742) Q Consensus 121 ~~~~~~~~~~~~~--~~~--~----~~~~~~~~~~-----~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (742) .++-+-|||=--| |-| | |-.+++---+ -||.-.|+ +--||..-+= ..+.=-|-|++. || T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~----~~ 220 (774) T protein:vir:98 147 TVAATGPYTGSTSGRYFLRVDDVAAGVATIKWQFVPLGQNPLNWAAVTTDIDVNIAAGAG--SSSNVLIPLTSN----NI 220 (774) T ss_pred ceeeccccccccCceEEEEEcccccceeeeEEEEEecCCCcccceeeeeeeeeeeeccCC--CccceEEEeecC----ce Confidence 1223333331111 101 0 1112111000 12222111 1111110000 000001222221 11 Q ss_pred EEEEe--------ecCCCcceEeecccCCCcceeeeeecccccccccCcccceeeEEEeeeeec-----ccCCceeccce Q lcl|Aclame:pro 186 TLNYT--------VSKATTPWVYFAEYGTPTSSLTLYKGFYLEGIDLNSFNKQFVVSIENITVN-----REKGQVLYPSF 252 (742) Q Consensus 186 ~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~ 252 (742) .+.+- .-.-.+|.+-...| --+.-.|+| || -.|.|-+.+.-.-| +-+.+|-||-. T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~------~~---~~~~~~~~~~~~~~~~~~~~~~~~v~~~GV 288 (774) T protein:vir:98 221 SVRFGTVVGAALNLVEGNSWSIRVNKY---VVSVPIFSG------DL---PNQIVTSLISACAGVEPFGEITRNVEDNGV 288 (774) T ss_pred eEEEeeeeeeeEeeecCCccceeecce---eeeeccccC------cc---hhhhhhhhhhhhcccccccceEEEEecCce Confidence 11110 00011111111111 012334444 11 11222221111112 22222222211 Q ss_pred eEEEEEeeccCCCCCccceeeeeeecCCCCCeeeecccCceEEEEcCceEEecccccCCcceEEEEeccccccccccchh Q lcl|Aclame:pro 253 DVVVHFRDIRGVSANTEYIRFRQVNLNPESPNYIERVIGNMTFEFDGERIVTGGEYPNQVPFLRVVVSQDIKQNVAGVEK 332 (742) Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vtG~~~~n~~p~L~~si~~~~~~~~ag~s~ 332 (742) -+ .-+|++...| .-.+++.+-.++|- .+| | ++|. |.|..|+.+-..+.+.-..+ T Consensus 289 YV-------EEVpSGvrtI-------eGGV~TSVAAFVG~------A~r---G--Pvn~-PvlITS~aD~~~~Fg~~~GG 342 (774) T protein:vir:98 289 VI-------QLEPALTGSI-------SNRFSFYVTANDNT------ANR---G--FTTS-PALVTTIPDPAIHFTSFQGG 342 (774) T ss_pred EE-------EEeCCCCccc-------cccccceeeeeccc------ccC---C--CCCc-CEEEeehhHhhhhhccccCC Confidence 10 1122332222 00123344444441 111 3 4553 88888888744333211111 Q ss_pred hhh-h-hhhhheecccceEEE----------EEEEEEeeeccccccccchhhheeeeecccccceeee-eeccccccccc Q lcl|Aclame:pro 333 WVP-V-GFEGIYSVGDFTVIV----------NELTNVSIPVTDSAIIPPMRFTRIEQITLSGGASFSV-ISNQPYGFNIQ 399 (742) Q Consensus 333 ~ip-~-al~aI~avg~~tv~v----------~~itnv~~p~tdsa~vp~~~~~li~~~~l~~ga~~~v-l~~~~~~~~i~ 399 (742) +.+ + ++...+..+...... +.++....+.+++.+ .+..... .+..+.. ...+....... T Consensus 343 l~GassA~r~~~~~sG~~~L~i~A~~pGawGN~ItV~I~~~t~~~~------~l~v~~~--~~s~f~~~~a~e~~tv~~~ 414 (774) T protein:vir:98 343 LDGPRSAFRDFYTFNGTPLLRLQAVSEGNWGNQVTVSIYPVNNSEF------RLNVQDL--NGSAFNPPLADEVYTVKLG 414 (774) T ss_pred ccccceeeeeeeeecccceEEEEEeecCcCCCceEEEEEecCCcee------EEEEEec--CCccccccccceeEEEecc Confidence 100 0 111111111100000 111111111111100 0000000 0000000 00000000000 Q ss_pred ccccceeeeccCCcceeeecc---cc-----cccccccceeEeecccc---ccccc----------ceeeeccCCcceEE Q lcl|Aclame:pro 400 DSRHSYWLSPFKDDELIIGTE---LV-----LPALDVSTEFGVSSWEE---ALPEF----------SFLMPFQGGSDGYI 458 (742) Q Consensus 400 ~s~~~~~Ls~l~d~s~~v~td---~~-----a~a~d~s~~v~l~~~~~---~~p~a----------~~av~l~gGtdg~i 458 (742) .......+....+...+.... .. ..+......+....... ..+.. ...+.+++|.|+.. T Consensus 415 ~~~~~~~v~e~~dn~~i~~~~~~~~~~~in~vs~lv~~~~~~~a~~d~~~~~~~~~~~~~~~~~~~~v~v~lagG~Dg~~ 494 (774) T protein:vir:98 415 DTNESGELNALLDSKFIRGFFLPKSIDSINYDAALVRQSPLRLAPPDESETDVENPAHVDFYGPNVLVDVTLENGYDGPP 494 (774) T ss_pred cccccceeeeeeceeeEeecccccccccccccccccccchhcccccccccccccccccccccCCcceEEEeecCCCCccc Confidence 000000000000000000000 00 00000000000000000 00000 00111122222110 Q ss_pred EecCCccccccccccccccccchhhHHHhhccCCccEEEEcCCCchHHHHHHHHHHHhh---cCceEEEEECCCCCChHH Q lcl|Aclame:pro 459 RVDENEPDTIGRVKITPALLANYERLLPLLTEDQFDLVLTPYLTFADHAGTVNAFINRA---ENRFLYLFDIAGDDDTEN 535 (742) Q Consensus 459 ~vd~~~~~~ig~~~~~~~~~a~rtGL~AL~~~d~v~LL~aPg~t~s~v~aal~Al~a~a---~~R~~aI~D~p~~~~t~~ 535 (742) ... ..+.+..+..+...+.+++. +.....++.++.++|+.+ ++.+++++|.|.+. +.+ T Consensus 495 ----------tt~-------~~igg~~~~~~~tgi~aLl~-a~~~~~V~~aii~~~e~~~~~~~~r~avid~p~g~-t~~ 555 (774) T protein:vir:98 495 ----------VTN-------DDYVSIIRTLENQPVHILLV-GTTNVGVQQALITEAERASDSDGLRIAVLAAPPRT-TPT 555 (774) T ss_pred ----------ccc-------hheecccccccccceeEEEc-CccchhhHHHHHHHHHHhhhcccceEEEEECCCCC-CHH Confidence 000 01111111111223344443 445667777888888765 22234555665554 456 Q ss_pred HHHHHHhccCCcEEEEEecceeeccc--cceeEechHHHHHHHHhhhccCceeecCCceeeEeeecc----------ccc Q lcl|Aclame:pro 536 LAISLAGYINSSFATTFFPWVRRLTN--KGMRTVPASLAAYRSIRTTDPETGLAPVGARRGVVTGEP----------VRQ 603 (742) Q Consensus 536 ~A~a~r~~~~S~~aaL~~PwVkv~d~--~~~~~vPpSgavAGl~ArtD~e~Gv~~SPaN~~I~~~~~----------ls~ 603 (742) .+.+|+++++|+|+++||||+++.|+ +..+++||||++||++||+| +|+||+|+.+.+... .++ T Consensus 556 ~Ai~~r~~f~S~~aal~~Pwvkv~D~~~g~~~~vPpSg~vAGl~ArtD----v~kSPANk~I~Givg~ai~~~l~~~~t~ 631 (774) T protein:vir:98 556 LAASVTRGFNSTRAVMVAGWFTYAGQPNSSRYGVPGAAVYAGKLAAID----FFVSPAARSLVGPLFNIIESDTDNYTSR 631 (774) T ss_pred HHHHHHhccCCceEEEEeCcEEEeccCCCceeecChhHHHHHHHHhcC----cccccCCceeecceeccccccccccccc Confidence 78999999999999999999999875 45678999999999999999 899999998765432 346 Q ss_pred hhHHhhhcCCceEEE-E-cCCCEEEEcceecCCCccccceeehhhhhHHHHHHHHHHHHHhhcccCCHHHHHHHHHHHHH Q lcl|Aclame:pro 604 VDWEDLYNNRINPIV-R-VGNDVLLFGQKTMLNVNSALNRINVRRLLIVMRNRISQILSSYLFENNTSENRLRAEALVRQ 681 (742) Q Consensus 604 sE~d~LN~~GINtI~-~-fg~G~rlWGnRTlas~D~~wrfInVRR~~d~Ie~sI~~a~~~~VfEPNd~~l~~~V~~sIna 681 (742) .|++.|+.++||+++ . +++|+++||+||+ +.|++|+||++|||++||+++|++.++|+||||||+.+|++|+++++. T Consensus 632 ae~d~Ln~~gIN~i~itt~g~G~rvWG~RTl-ssDp~wr~InVRRlfd~Ie~SI~~~~~~~VfEPNd~~l~~~I~~sI~~ 710 (774) T protein:vir:98 632 SNQDIYSAARLEVLSLDTVDRTYRFASGVTL-STDPAWERIYLRRVHDVVRQGAHAILRNYVAMPNSRLVRNQIAAALNA 710 (774) T ss_pred hhhhhhcccccceeEEEEcCCcEEEEccccc-CCCcccceEeehhhHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHH Confidence 788999999999987 3 4899999999998 678999999999999999999999999999999999999999999999 Q ss_pred HHHHHHhCCceeeEE-EEEcCC-CCHHHhhCCEEEEEEEEEecCCceEEEEEEEEeeceeecC Q lcl|Aclame:pro 682 YLESLRLRGAVTDYE-VAIDSV-TTPTDIDNNTLRARVTVQPARSIEYIDITFVITPTGVEIT 742 (742) Q Consensus 682 fL~~L~~~GAL~Gf~-V~~Det-Ntp~dI~~GrL~i~I~vaP~~PAEfI~l~f~it~tG~~fs 742 (742) ||++||++|+|.|++ |+||++ |+++++++|+|+++|+++|++|||||+|+|.+...+.+|. T Consensus 711 fL~~L~~~GaL~G~~~V~~D~etNt~~dI~~G~l~i~I~vaP~~PAEfIilri~q~t~~~~l~ 773 (774) T protein:vir:98 711 FMGELKRNGNIVSFRPAIIDGSNNSTAAYFSRELYVSLQFQPLYSADYIYVTISRDTETSPLG 773 (774) T ss_pred HHHHHHhCCceecceEEEEcCCCCCHHHhhCCEEEEEEEEEecCCcceEEEEEEEeecceecc Confidence 999999999999997 899965 7889999999999999999999999999999999999999 No 33 >protein:vir:79798 Length: 717 # NCBI annotation: tail sheath subunit # Family: family:all:12069 # MgeID: mge:1874 # MgeName: 0305phi8-36 # Cross-refs: genbank:acc:YP_001429630;genbank:gi:156564120;genbank:GeneID:5525563 Probab=100.00 E-value=6.8e-49 Score=284.67 Aligned_cols=619 Identities=17% Similarity=0.185 Sum_probs=292.1 Q ss_pred CeeeeeeeeeeEe--ccccCCchhhh-eee-eecCCCCcccceeechhHHhh-ccc-----------ceeeeehhh-hcC Q lcl|Aclame:pro 1 MYRVNVKEVDLSI--TPEVGTPVQTA-LVG-AFDLPIPSELPVSVTPDEFRR-VGS-----------TELSLIADS-LVG 63 (742) Q Consensus 1 ~~~~~~~~~~~~~--~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~-~~~-----------~~~~~~~~~-~~~ 63 (742) -..+..|.=.|-. .||-.. -|.. |.| |.|- |---||+|+|..-.. .|. |-|.-.-.. -.| T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (717) T protein:vir:79 12 GHNARFKDGNLNLKSDPNPRE-TESVVLLGTATDG--PVMQPVRVTPETAYNIFGKVAHENGVYNGATLLPKFEELWAAG 88 (717) T ss_pred CceeeeecCceecCCCCCccc-cceEEEEeeccCC--cccCceeeChhHHHhhhhhhhhhcccccchhhhHHHHHHHhcC Confidence 1122233333332 232221 1222 222 4444 456799999975322 232 111111111 134 Q ss_pred cceEEEEccCCcccccceeEEEEecceeeehhhheeeeeeeecccCCCcccceeE---EEEEccCCCeeEEEeeecCCCc Q lcl|Aclame:pro 64 GQEVTVIRPRGETQSLNAAFVVVGGYNVTLGAFNVFYLMFLGYDPQKGYTDVSYV---DVQLAGTPTDTILFSYSLDGSS 140 (742) Q Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 140 (742) ...+.+.|-.|.+.-- -.||-|-.+-.+.+.-- .-|+. -..-|.+.|- .| T Consensus 89 ~~~~~~~~~~~~~~~~----------------------~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~-~~ 141 (717) T protein:vir:79 89 NRDIRLMRTTGVNAVS----------------------SLLGTSYSKNSKEVAEDKLGGAQAR----GNVAATFTLP-NG 141 (717) T ss_pred CcceEEEEecchhHHH----------------------HHhhcccccchhhHHHHhhcccccc----cceEEEEEcC-CC Confidence 5556666666654210 01222222221111000 01111 1223333342 34 Q ss_pred ceeEEEEEeeceeEeecccceeeeeeecccc------------ceEEEEeecC--ccccEEEEeecCCCcceEeecccCC Q lcl|Aclame:pro 141 TTHSLTINLNAPSVTLPSNIVPLFFYYEPYT------------GSITLQSSVN--YSGLTLNYTVSKATTPWVYFAEYGT 206 (742) Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (742) .+-+-|.=|.+--|-+|.|- |..|--| -.+-|.+.+. .+.|++.|.. -|-..-|- T Consensus 142 ~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~ 210 (717) T protein:vir:79 142 GIVEATFLLKARGVIIPPNN----YTLDVGTEEDMKAGTQPTFAQVLLNENVADMESEITVSYEF-------TYKDAQGE 210 (717) T ss_pred ceeeeeeeeeecceEeCCCc----ceEeccChhhhhcCCCchhhhhhhccchhhccceeEEEEEE-------EeecccCc Confidence 56677777777777766552 2222211 1222333322 2344444441 22222333 Q ss_pred CcceeeeeecccccccccCcccceeeEEEeeeeecccCCceeccceeEEEEEeecc--CCCCCccceeeeeeecCCCCCe Q lcl|Aclame:pro 207 PTSSLTLYKGFYLEGIDLNSFNKQFVVSIENITVNREKGQVLYPSFDVVVHFRDIR--GVSANTEYIRFRQVNLNPESPN 284 (742) Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 284 (742) -|+|- -+| |.+.|+ --|++-.-+|+-|..|.+. +-.--++-| T Consensus 211 ~~~~~---------~~~-~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------- 254 (717) T protein:vir:79 211 TKTSE---------VLD-NNTDKD-------------GKPMIAKGADVTIKLEHVALAGLKLYADGI------------- 254 (717) T ss_pred chhhh---------hhc-CCCCCC-------------CceeEEecccceeehhhhhhhhhHHhhcch------------- Confidence 33331 222 333332 2355666667777666521 000011112 Q ss_pred eeecccCc--eEEEEcCceEEecccccCCcceEEEEeccccccccccchhhhhhhhhhheecccceEEEEEEEEEeeecc Q lcl|Aclame:pro 285 YIERVIGN--MTFEFDGERIVTGGEYPNQVPFLRVVVSQDIKQNVAGVEKWVPVGFEGIYSVGDFTVIVNELTNVSIPVT 362 (742) Q Consensus 285 ~~~~~~~~--~~~~~~g~~~vtG~~~~n~~p~L~~si~~~~~~~~ag~s~~ip~al~aI~avg~~tv~v~~itnv~~p~t 362 (742) +|++- .++.++|.-+ -.|-.-+|--|+-+..+.+..-+..-+ --|+.+|....+.-....+.+...-.+ T Consensus 255 ---~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~n~~~~~v~~~D~~~~ 325 (717) T protein:vir:79 255 ---EVVDAKAFTVAGDQLTI-----HSNSKMKLGASLEAQYAYNLVEVIQPV-IELESIFGGGVYNDIMRKVESKDGAVT 325 (717) T ss_pred ---hhhhhhheeeecceEEE-----EecCCcccchhhHHHHHhhHHHhhccc-eEEeecccCceeeeeeeEEecCCceEE Confidence 11111 1222222211 111111111111111111111111000 013333332222211111111101111 Q ss_pred ccccccchhhheee--eecccccceeeeeecccccccccccccceeeeccCCcceeeecccccccccc-cceeEeecccc Q lcl|Aclame:pro 363 DSAIIPPMRFTRIE--QITLSGGASFSVISNQPYGFNIQDSRHSYWLSPFKDDELIIGTELVLPALDV-STEFGVSSWEE 439 (742) Q Consensus 363 dsa~vp~~~~~li~--~~~l~~ga~~~vl~~~~~~~~i~~s~~~~~Ls~l~d~s~~v~td~~a~a~d~-s~~v~l~~~~~ 439 (742) ++.+.+........ ++....+. |..... .+....++..-.+ ....+. .....+..+.. T Consensus 326 ~~~t~~~~~~g~~~~~pl~~ts~d-y~~~~~--------------~vdgI~~~~~~~V----~~~g~~s~a~a~~~~g~~ 386 (717) T protein:vir:79 326 VTITKPESKRGMISEDPLVFKSGD-YTNFKM--------------LVDAINNHPFNNV----VRARTKPEFEATFTSTLQ 386 (717) T ss_pred EEEecccccCcceeccccccccCc-eeeeee--------------eecccccCchhhe----eeeecccccceeeeeccc Confidence 22221111111100 11111111 100000 0000000000000 000000 00000111110 Q ss_pred cccccceeeeccCCcceEEEecCCccccccccccccccccchhhHHHhhccCCccEEEEcCCCc--------hHHHHHHH Q lcl|Aclame:pro 440 ALPEFSFLMPFQGGSDGYIRVDENEPDTIGRVKITPALLANYERLLPLLTEDQFDLVLTPYLTF--------ADHAGTVN 511 (742) Q Consensus 440 ~~p~a~~av~l~gGtdg~i~vd~~~~~~ig~~~~~~~~~a~rtGL~AL~~~d~v~LL~aPg~t~--------s~v~aal~ 511 (742) . .....+.|+.|+............+......+...+. +.+..++..+++++++|+... .+.+..+. T Consensus 387 s----~d~a~f~Gg~dgl~~~~ee~Y~~lGgk~~d~g~lt~~-aays~LE~~dVDlVil~ga~adtt~ga~~d~va~ala 461 (717) T protein:vir:79 387 A----AADAKFSGGKDELSLDKEEMYKRLGGEKNEEGFVTKQ-GAYQYLENYEVDYVIPLGVHADTKLIGKYDDFAYQLA 461 (717) T ss_pred C----chhhccCCCccccccchhhhhccccccccccccccch-hhhhhcCcceeEEEEecCccccccccchhhhHHHHHH Confidence 0 1112244455554332211111111111111111222 344444556789999998632 13455667 Q ss_pred HHHHhhc----CceEEEEE-CCCCCChHHHHHHHHhcc------------------C--------CcEEE-EEecceeec Q lcl|Aclame:pro 512 AFINRAE----NRFLYLFD-IAGDDDTENLAISLAGYI------------------N--------SSFAT-TFFPWVRRL 559 (742) Q Consensus 512 Al~a~a~----~R~~aI~D-~p~~~~t~~~A~a~r~~~------------------~--------S~~aa-L~~PwVkv~ 559 (742) ++|+.+. .++.++.. .|.+. ..+...+++..+ + +.+.. ++.+|.... T Consensus 462 d~caalSal~r~ai~VI~l~sp~D~-~~AtVe~~~~kLs~~Aaa~~~~d~~~a~a~~~~~~~idis~y~~vv~~~~~iv~ 540 (717) T protein:vir:79 462 LACAVMSHYNSVTIGIIPTTTPSDI-SLAGVEEHVKKLENYANEFYMRDRFGNIIFDADRNKIDLGQFIEVVAGPDFIVR 540 (717) T ss_pred HHHHHhhhccccceeeecccccccc-chhhHHHHHHHHHhhhhhhhhhcchhccccccccccccccceeeeeecceeEEE Confidence 7776542 13333322 22221 111111211110 0 12332 333444333 Q ss_pred cc-cceeEechHHHHHHHHhhhccCceeecCCceeeEeeec----cccchhHHhhhcCCceEEEEc-CCCEEEEcceecC Q lcl|Aclame:pro 560 TN-KGMRTVPASLAAYRSIRTTDPETGLAPVGARRGVVTGE----PVRQVDWEDLYNNRINPIVRV-GNDVLLFGQKTML 633 (742) Q Consensus 560 d~-~~~~~vPpSgavAGl~ArtD~e~Gv~~SPaN~~I~~~~----~ls~sE~d~LN~~GINtI~~f-g~G~rlWGnRTla 633 (742) +. ...+..||+|++||+.+ ++|+|+||+|+.+.+.. .++++|++.||++|||||+++ ++|+++||+||++ T Consensus 541 ~~~~~~~~~p~AG~vAGldA----~rGVwkSPANk~I~GVvgLa~~lT~sE~d~Ln~aGIntIr~~~GrGirVWGaRTta 616 (717) T protein:vir:79 541 NTRLGQMASTPDASYIGMVS----QLKTQSAPTNKPLPSVTALRYTYSANQLNRLTKARFATFKYKQDGSIGVVDAPTSA 616 (717) T ss_pred cCCCceeecCHHHHHHHHHh----cCCcccccccceecccccCcccCCHHHHHHHhhCCeEEEEEeCCceEEEEeeeecC Confidence 32 33456677777766655 57999999999876654 457899999999999999987 7899999999997 Q ss_pred CCccccceeehhhhhHHHHHHHHHHHHHhhcccCCHHHHHHHHHHHHHHHHHHHhCCceeeEEEEEcCCCCHHHhhCCEE Q lcl|Aclame:pro 634 NVNSALNRINVRRLLIVMRNRISQILSSYLFENNTSENRLRAEALVRQYLESLRLRGAVTDYEVAIDSVTTPTDIDNNTL 713 (742) Q Consensus 634 s~D~~wrfInVRR~~d~Ie~sI~~a~~~~VfEPNd~~l~~~V~~sInafL~~L~~~GAL~Gf~V~~DetNtp~dI~~GrL 713 (742) ++++.|+||++||++++|+++|+++++|+|||||++.+|.+|+.+|++||++||++|+|.||++++ +|+++++++|++ T Consensus 617 sd~sdWryInVRRl~D~Ie~sIr~al~~yVgEPNd~~tr~~Ik~sI~afL~~L~r~GAI~Gykvdv--tnT~~di~~G~l 694 (717) T protein:vir:79 617 HAGSDYTRLSTARIVKEAVNAVREVADPFIGEPNDTGNRNALTAAVDKRLSKMIENKALLGFDFRL--VVTPQQELLGEG 694 (717) T ss_pred CCCcccceeehhhhHHHHHHHHHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHhcCceecceeeE--ecChhHhhCCEE Confidence 777789999999999999999999999999999999999999999999999999999999999765 899999999999 Q ss_pred EEEEEEEecCCceEEEEEEEEee Q lcl|Aclame:pro 714 RARVTVQPARSIEYIDITFVITP 736 (742) Q Consensus 714 ~i~I~vaP~~PAEfI~l~f~it~ 736 (742) +++++++|++|||||+++++++. T Consensus 695 ~V~I~vaPv~PaEfI~ititITA 717 (717) T protein:vir:79 695 SIELSLEAPNELRRLTTIVSLSA 717 (717) T ss_pred EEEEEEEecCcccEEEEEEEEeC Confidence 99999999999999999999998 No 34 >protein:vir:7653 Length: 581 # NCBI annotation: gp124 # Family: family:all:1196 # MgeID: mge:148 # MgeName: Bxz1 # Cross-refs: genbank:acc:NP_818197;genbank:gi:29566631;genbank:GeneID:1259809 Probab=100.00 E-value=1.2e-35 Score=212.03 Aligned_cols=511 Identities=14% Similarity=0.085 Sum_probs=240.7 Q ss_pred cEEEEeecCCCcceEeecccCCCcceeeeeecccccccccCcccceeeEEEeeeeecccCCceeccceeEEEEEeeccCC Q lcl|Aclame:pro 185 LTLNYTVSKATTPWVYFAEYGTPTSSLTLYKGFYLEGIDLNSFNKQFVVSIENITVNREKGQVLYPSFDVVVHFRDIRGV 264 (742) Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (742) +-+.|+-|.. +-.|--..|.|..-+ +.| +.+....-+--.| |+ .|..+.|.- T Consensus 1 ~~~~~~~~~~--~~~~t~~~~~~~~g~-----------------~~~-~~~~~~i~g~~~g---~~-----g~~~s~r~~ 52 (581) T protein:vir:76 1 MAIDFSQYQT--PGVYTEAVGAPQLGI-----------------RSS-VPTAVAIFGTAVG---YQ-----TYRESIRIN 52 (581) T ss_pred Cccccccccc--chhhhhhccccccCc-----------------cee-eeeeeeecccccc---cc-----cccceeeec Confidence 3333332221 111112222221111 000 0111111111112 11 223344443 Q ss_pred CCCccceeeeeeecCCCCCeeeecccCceEEEEcCceEEecccccCCc-ceEEEEe-------ccccccccccchhhh-- Q lcl|Aclame:pro 265 SANTEYIRFRQVNLNPESPNYIERVIGNMTFEFDGERIVTGGEYPNQV-PFLRVVV-------SQDIKQNVAGVEKWV-- 334 (742) Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vtG~~~~n~~-p~L~~si-------~~~~~~~~ag~s~~i-- 334 (742) |....--....|.+.- . +-=|..+.++.|+. |+..+.|-. .-++..+ ..++.-.+.....|- T Consensus 53 p~~~~~~evq~v~~~~-~-----~t~G~ftLt~~g~t--T~~I~~~asa~~v~~AL~~L~~i~~~~v~vtg~~~~~~~V~ 124 (581) T protein:vir:76 53 PDTGETITTQILALVG-E-----PTGGSFKLSLAGEP--TGNIPFNATQGQVQSALRALPNVEDDEVTVLGDPGGPWTVT 124 (581) T ss_pred CCCCCCCceEEEEEee-c-----CCcceEEEEeCcee--ccccccCCCHHHHHHHHhhccCCCCceEEEEcCCCceEEEE Confidence 3322211111222211 0 11255677777764 243333310 0000000 000000000000000 Q ss_pred -hhhhhhhe------ecccc-eEEEEEEEEEeeecccccc-ccchhhheeeeecccccceeeeeecccccccccccccce Q lcl|Aclame:pro 335 -PVGFEGIY------SVGDF-TVIVNELTNVSIPVTDSAI-IPPMRFTRIEQITLSGGASFSVISNQPYGFNIQDSRHSY 405 (742) Q Consensus 335 -p~al~aI~------avg~~-tv~v~~itnv~~p~tdsa~-vp~~~~~li~~~~l~~ga~~~vl~~~~~~~~i~~s~~~~ 405 (742) ...+..+- ..+.+ .+.+.. .....|..+-.. ..+..-..........+..+....+...+........ T Consensus 125 F~g~~~~~~~~~~~ltg~~~~~~~V~~-~~~G~~~~~~~l~~~g~~~~~~~~~~s~~~~~~~l~~~~~~~~~~~~~~~-- 201 (581) T protein:vir:76 125 FTKAVAALTKDVTGLTGGDNPDLNIAS-EQTGVPAMNRALAKKGIKTDTIRVVNPNSGQVYVLGTDYVVTRVNAGEDG-- 201 (581) T ss_pred EcCCccceeEeeeeeecCCcceeEEEE-EecCcCCcCceeeeccccccccceeecCCcceeeecccccceeeccCccc-- Confidence 00000000 00000 000000 000111100000 0000000000111111222211111000000000000 Q ss_pred eeeccCCcceee----------------ecccccccccccceeEeecccccccccceeeeccCCcceEEEe-------cC Q lcl|Aclame:pro 406 WLSPFKDDELII----------------GTELVLPALDVSTEFGVSSWEEALPEFSFLMPFQGGSDGYIRV-------DE 462 (742) Q Consensus 406 ~Ls~l~d~s~~v----------------~td~~a~a~d~s~~v~l~~~~~~~p~a~~av~l~gGtdg~i~v-------d~ 462 (742) .....++...+ +...+... ...+.+....+.....-...+...+|+.+..... .. T Consensus 202 -~~~~~~~~~t~~~~~~g~~~~~~~i~~~~~~~~D~-~~~~~v~~~~~~~~~~~~~~~~~~~g~~~~e~~~~~~~~~t~~ 279 (581) T protein:vir:76 202 -EANTRDDLYTIQRVVDGGHIDPGDIVQLSYRYTDP-NYHEVIRFTDPDDIQDFYGPAFDEAGNVQSEITLCAQLAITNG 279 (581) T ss_pred -ceeeeeeeeeeEeecccccccceeEEEEEEEeecC-CccceEEEecccccccceeeehhhcCccccchhhhhheeeccc Confidence 00000100000 00000000 0011222222222211111111222222211110 00 Q ss_pred Cccccccccccc--cccccc-hhhHHHhhccCCccEEEEcCCCchHHHHHHHHHHHhhcC----ceEEEEE-CCCCCChH Q lcl|Aclame:pro 463 NEPDTIGRVKIT--PALLAN-YERLLPLLTEDQFDLVLTPYLTFADHAGTVNAFINRAEN----RFLYLFD-IAGDDDTE 534 (742) Q Consensus 463 ~~~~~ig~~~~~--~~~~a~-rtGL~AL~~~d~v~LL~aPg~t~s~v~aal~Al~a~a~~----R~~aI~D-~p~~~~t~ 534 (742) ......+..+.. ....++ .++|.+|+..+ +..+++|+..++.+++.+.+||..++. |+.++.- +.....+. T Consensus 280 ~~~~l~~gvd~~g~tvt~~dy~~aL~ale~~~-~~~ivvp~t~~~~i~a~l~ahv~~~s~~~~~~ra~igv~g~~~~~~~ 358 (581) T protein:vir:76 280 ASTILACAVDPEGDTVTMGDYQNALNKFRDED-EIAIIVAGTGAQPIQALVQQHVSAQSNNKYERRAILGMDGSVTPVPS 358 (581) T ss_pred cceEEEeeecCCCCccchHHHHHHHHHHhcCC-eEEEEEecCCChHHHHHHHHHHHHHHhccCCceEEEEeeCCCCCchH Confidence 000000111100 001123 35677777655 445668898888999999999988742 2333322 22222345 Q ss_pred HHHHHHHhccCCcEEEEEecceeecccc---ceeEechHHHHHHHHhhhccCceeecCCceeeEeeec----cccchhHH Q lcl|Aclame:pro 535 NLAISLAGYINSSFATTFFPWVRRLTNK---GMRTVPASLAAYRSIRTTDPETGLAPVGARRGVVTGE----PVRQVDWE 607 (742) Q Consensus 535 ~~A~a~r~~~~S~~aaL~~PwVkv~d~~---~~~~vPpSgavAGl~ArtD~e~Gv~~SPaN~~I~~~~----~ls~sE~d 607 (742) +.+.+....+++.|+.++|||.+..+.. ....+|+ ..+|+..|.......++.|+.|+.+.+.. .+++.|++ T Consensus 359 ~~~~~~a~~~ns~Rvvlv~p~~~~~~g~~~~~~~~lp~-~~~AA~vAG~~a~~~~~~slT~~~i~g~~~~~~~~s~~e~e 437 (581) T protein:vir:76 359 ATRIANAQSIKDQRVALISPSSFVYYAPELNREVVLGG-QFMAAAVAGKSVSAIAAMPLTRKVIRGFSGPAEVQRDGEKS 437 (581) T ss_pred HHHHHhhcccCCCcEEEEEcCceEeccccCCcceecch-hhhhhhHHhhhhccccccCcccccccccccccccCCHHHHH Confidence 5566777889999999999998776543 2233343 33344344444444567788888776544 45788999 Q ss_pred hhhcCCceEEEEc-CCCEEE-EcceecCCCccccceeehhhhhHHHHHHHHHHHH--HhhcccCCHHHHHHHHHHHHHHH Q lcl|Aclame:pro 608 DLYNNRINPIVRV-GNDVLL-FGQKTMLNVNSALNRINVRRLLIVMRNRISQILS--SYLFENNTSENRLRAEALVRQYL 683 (742) Q Consensus 608 ~LN~~GINtI~~f-g~G~rl-WGnRTlas~D~~wrfInVRR~~d~Ie~sI~~a~~--~~VfEPNd~~l~~~V~~sInafL 683 (742) .|+++|++++... ++++++ ||-+|+ .+++.|+++++||++|++++.+++.++ +|++|||+..+|.+|+..+.+|| T Consensus 438 ~ll~~Gv~~l~~~~~~~v~Iv~gItT~-~s~~~~k~i~viR~~D~v~~~vr~~~~~~~fiG~~n~~~~r~~ik~~i~~~L 516 (581) T protein:vir:76 438 RESSEGLMVIEKTPRNLVHVRHGVTTD-PTSLHTREWNIIGQQDVMVYRIRDYLDADGLIGMPIYDTTIVQVKASAEAAL 516 (581) T ss_pred HHHhCCeEEEEEecCCeEEEEEeeecC-CCCCccceeeehhhhHHHHHHHHHHHhhhcCCCcccChHHHHHHHHHHHHHH Confidence 9999999999864 667774 888887 568899999999999999999999975 58889999999999999999999 Q ss_pred HHHHhCCceeeEEEEEcCCCCHHHhhCCEEEEEEEEEecCCceEEEEEEEEeeceeecC Q lcl|Aclame:pro 684 ESLRLRGAVTDYEVAIDSVTTPTDIDNNTLRARVTVQPARSIEYIDITFVITPTGVEIT 742 (742) Q Consensus 684 ~~L~~~GAL~Gf~V~~DetNtp~dI~~GrL~i~I~vaP~~PAEfI~l~f~it~tG~~fs 742 (742) .+||++|+|.||+. .+.+..+.+.+++++++.++|++|+|||.+++.+.+.+-+|+ T Consensus 517 ~~l~~~g~I~g~~~---~~~~~~~~~~d~v~V~i~v~Pv~~ie~I~vt~~~~p~~~~~~ 572 (581) T protein:vir:76 517 VWLVDNNIIRGYRN---LKARQIERQPDVIEVRYEWRPAYPLNYIVVRYSIAPETGDIT 572 (581) T ss_pred HHHHhcCcccCccc---ceeeEEecCCCEEEEEEEEEecccceEEEEEEEEeeCCCceE Confidence 99999999999863 234455667899999999999999999999999999888988 No 35 >protein:vir:107310 Length: 581 # NCBI annotation: gp123 # Family: family:all:1196 # MgeID: mge:1550 # MgeName: Catera # Cross-refs: genbank:acc:YP_656131;genbank:gi:109393333;genbank:GeneID:4156791 Probab=100.00 E-value=2.7e-35 Score=210.08 Aligned_cols=536 Identities=16% Similarity=0.109 Sum_probs=266.1 Q ss_pred eeEEEEEccCCCeeEEEeeecCCCcceeEEEEEeeceeEe------ecccceeeeeeeccccceEEEEeecCccccEEEE Q lcl|Aclame:pro 116 SYVDVQLAGTPTDTILFSYSLDGSSTTHSLTINLNAPSVT------LPSNIVPLFFYYEPYTGSITLQSSVNYSGLTLNY 189 (742) Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (742) --||++ ++.++-++|--+.+|.+- .+-.|.-.+--|.-|--+.+.-.+.+. T Consensus 1 ~~~~~~----------------~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~g~~~g~~g~~~s~~~~p~~~~------- 57 (581) T protein:vir:10 1 MAIDFS----------------QYQTPGVYTEAVGAPQLGIRSSVPTAVAIFGTAVGYQTYRESIRINPDTGE------- 57 (581) T ss_pred Ceeeec----------------cccccchhhhhccccccceeeeeccccccccccccccccccccccCCCCCC------- Confidence 112222 333343444333333221 111111111123333333333322111 Q ss_pred eecCCCcceEeecccCCCcc-eeee-eecccccccccCcccceeeEEEeeeeecccCCceeccceeEEEEEeeccCCCCC Q lcl|Aclame:pro 190 TVSKATTPWVYFAEYGTPTS-SLTL-YKGFYLEGIDLNSFNKQFVVSIENITVNREKGQVLYPSFDVVVHFRDIRGVSAN 267 (742) Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (742) ....++|.. .+.|++ +.+| |.|-.-..|..|..+.+.-.++++...- .. -|+.|. +.+.+ T Consensus 58 ---~~e~q~v~~--~~~~t~GtFtLsf~G~tT~~I~~~asa~~v~~AL~~L~~i-~~-------~~v~v~-----g~~g~ 119 (581) T protein:vir:10 58 ---TITTQILAL--VGEPTGGSFKLSLAGEPTGNIPFNATQGQVQSALRALPNV-ED-------DEVTVL-----GDPGG 119 (581) T ss_pred ---ccceEEEEE--EecCCCceEEEEeCceecccccccCCHHHHHHHHhccCCC-Cc-------ceEEEE-----CCCCc Confidence 112222322 244543 4553 7777778899999988887777765322 12 233322 33333 Q ss_pred ccceeeeeeecCCCCCeeeecccCceEEEEcCceEEecccccCCcceEEEEecccccc-ccccchhh-hhhhhhhheecc Q lcl|Aclame:pro 268 TEYIRFRQVNLNPESPNYIERVIGNMTFEFDGERIVTGGEYPNQVPFLRVVVSQDIKQ-NVAGVEKW-VPVGFEGIYSVG 345 (742) Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vtG~~~~n~~p~L~~si~~~~~~-~~ag~s~~-ip~al~aI~avg 345 (742) .-.|.|. .. .+.++..+++. || ...|++.+.-.+.... ..+.-+.. +-..+.++.+.. T Consensus 120 ~~~VtF~-----g~--------~~~l~~~~~~l---t~----g~~~~vtV~~~~~g~~~~~~~~s~~gi~~~~~~l~~~~ 179 (581) T protein:vir:10 120 PWTVTFT-----KA--------VAALTKDVTGL---TG----GDDPDLNIASEQTGVPAMNRALAKKGIKTDTIRVVNPN 179 (581) T ss_pred eEEEEEc-----CC--------ccceeeeecee---cC----CCceeEEEeccccCcccccccccccccccccccccccc Confidence 4334332 11 11222222111 22 2233444432221100 00000000 001111111110 Q ss_pred --cceEEEEEEEEEeeec-cccccc-cchhhheeeeecccccceeeeeecccccccccccccceeeeccCCcceeeeccc Q lcl|Aclame:pro 346 --DFTVIVNELTNVSIPV-TDSAII-PPMRFTRIEQITLSGGASFSVISNQPYGFNIQDSRHSYWLSPFKDDELIIGTEL 421 (742) Q Consensus 346 --~~tv~v~~itnv~~p~-tdsa~v-p~~~~~li~~~~l~~ga~~~vl~~~~~~~~i~~s~~~~~Ls~l~d~s~~v~td~ 421 (742) ...+...+......-. ++.... .....+..............++-.. ....+.. .+....+.+.+.. ... T Consensus 180 ~~~~~~~gsd~~~~~~~~~~~~~~~~~~D~~t~~~~~~g~~~~~~~v~~~~---~~~~d~~-~~~~v~~~~~~~~--~~~ 253 (581) T protein:vir:10 180 SGQVYVLGTDYVVTRVNAGEDGEANTRDDLYTIQRVVDGGHIDPGDIVQLS---YRYTDPN-YHEVIRFTDPDDI--QDF 253 (581) T ss_pred cCcceeccccceeeecccCccccccccccceeeeeeecccccccceEEEEE---EEeecCC-cceeEEeecCcch--hhh Confidence 0111100000000000 000000 0000000000000000000000000 0000000 0000000000000 000 Q ss_pred ccccccccceeEeecccccccccceeeeccCCcceEEEecCCcccccccccccc--ccccc-hhhHHHhhccCCccEEEE Q lcl|Aclame:pro 422 VLPALDVSTEFGVSSWEEALPEFSFLMPFQGGSDGYIRVDENEPDTIGRVKITP--ALLAN-YERLLPLLTEDQFDLVLT 498 (742) Q Consensus 422 ~a~a~d~s~~v~l~~~~~~~p~a~~av~l~gGtdg~i~vd~~~~~~ig~~~~~~--~~~a~-rtGL~AL~~~d~v~LL~a 498 (742) +.+..+...... ...+... ...+..+...... +..+..+ -..++ ..+|.+|+..+. ..+++ T Consensus 254 ~~~~~~~~g~~~-----~~~t~~~-~~~~tn~~~~~l~---------~gvd~~g~tvt~~dy~~Al~ale~~~~-~~ivv 317 (581) T protein:vir:10 254 YGPAFDEAGNVQ-----SEITLCA-QLAITNGASTILA---------CAVDPEGDTVTMGDYQNALNKFRDEDE-IAIIV 317 (581) T ss_pred hhhhhhccCccc-----cchhhhh-eeeeecccceeEE---------eeccCCCCccchHHHHHHHHHHhcCCc-eEEEE Confidence 000000000000 0000000 0011111110000 0000000 01122 357777777654 45568 Q ss_pred cCCCchHHHHHHHHHHHhhcC----ceEEEEEC-CCCCChHHHHHHHHhccCCcEEEEEecceeeccccc---eeEech- Q lcl|Aclame:pro 499 PYLTFADHAGTVNAFINRAEN----RFLYLFDI-AGDDDTENLAISLAGYINSSFATTFFPWVRRLTNKG---MRTVPA- 569 (742) Q Consensus 499 Pg~t~s~v~aal~Al~a~a~~----R~~aI~D~-p~~~~t~~~A~a~r~~~~S~~aaL~~PwVkv~d~~~---~~~vPp- 569 (742) |+..++.+++.+.+||..+.. |+.++.-+ .....+.+.+.+....+++.|.+++||+.+..+... ...+|+ T Consensus 318 ~~t~~~~v~a~l~ahv~~~s~~~~~~ravigV~g~~~~~~~~~~~~~a~~~n~~Rvvlv~p~~~~~~g~~~~~~v~lp~y 397 (581) T protein:vir:10 318 AGTGAQPIQALVQQHVSAQSNNKYERRAILGMDGSVTPVPSATRIANAQSIKDQRVALISPSSFVYYAPELNREVVLGGQ 397 (581) T ss_pred eCCCCHHHHHHHHHHHHHHHhccCCcEEEEEecCCCCCccHHHHHHhhccCCCceEEEEecCceeecCcccCceeccchh Confidence 898888999999999988742 33333222 222334455667788999999999999987765432 233455 Q ss_pred --HHHHHHHHhhhccCceeecCCceeeEeeec----cccchhHHhhhcCCceEEEEc-CCCEEE-EcceecCCCccccce Q lcl|Aclame:pro 570 --SLAAYRSIRTTDPETGLAPVGARRGVVTGE----PVRQVDWEDLYNNRINPIVRV-GNDVLL-FGQKTMLNVNSALNR 641 (742) Q Consensus 570 --SgavAGl~ArtD~e~Gv~~SPaN~~I~~~~----~ls~sE~d~LN~~GINtI~~f-g~G~rl-WGnRTlas~D~~wrf 641 (742) ++++||++|..| ++.|+.|+.+.+.. .++..|++.|+++|+.++... ++++++ ||-+|+ .+|+.|++ T Consensus 398 ~~AA~vAGl~a~~~----~~~slT~~~i~gi~~l~~~~s~~e~e~ll~~Gv~~l~~~~~~~v~Iv~gItT~-~s~~~~~~ 472 (581) T protein:vir:10 398 FMAAAVAGKSVSAI----AAMPLTRKVIRGFSGPAEVQRDGEKSRESSEGLMVIEKTPRNLVHVRHGVTTD-PTSLHTRE 472 (581) T ss_pred hHHHHHHHHhhccc----cccCcccccccccccccccCCHHHHHHHHhCCeEEEEEecCCeEEEEeeeecC-CCCCccee Confidence 566677777665 56688887776543 457889999999999999874 677876 676786 56888999 Q ss_pred eehhhhhHHHHHHHHHHHH--HhhcccCCHHHHHHHHHHHHHHHHHHHhCCceeeEEEEEcCCCCHHHhhCCEEEEEEEE Q lcl|Aclame:pro 642 INVRRLLIVMRNRISQILS--SYLFENNTSENRLRAEALVRQYLESLRLRGAVTDYEVAIDSVTTPTDIDNNTLRARVTV 719 (742) Q Consensus 642 InVRR~~d~Ie~sI~~a~~--~~VfEPNd~~l~~~V~~sInafL~~L~~~GAL~Gf~V~~DetNtp~dI~~GrL~i~I~v 719 (742) |++||++|++.+.+++.++ +|++|||+..+|.+|+..+.+||.+||++|+|.||+.. +.++.+.+.+++++++.+ T Consensus 473 i~~iR~~D~v~~~ir~~~~~~~fIG~~n~~~~r~~ik~~i~~~L~~l~~~g~I~~~~~~---~~~~~~~~~d~v~V~i~v 549 (581) T protein:vir:10 473 WNIIGQQDVMVYRIRDYLDADGLIGMPIYDTTIVQVKASAEAALVWLVDNNIIRGYRNL---KARQIERQPDVIEVRYEW 549 (581) T ss_pred eeeehhhhHHHHHHHHHhhhhcCCCcccCHHHHHHHHHHHHHHHHHHHhcCcccCCccc---eeeeeecCCCEEEEEEEE Confidence 9999999999999999975 58999999999999999999999999999999998632 334455778999999999 Q ss_pred EecCCceEEEEEEEEeeceeecC Q lcl|Aclame:pro 720 QPARSIEYIDITFVITPTGVEIT 742 (742) Q Consensus 720 aP~~PAEfI~l~f~it~tG~~fs 742 (742) +|++|+|||.+|+.+...+-+|+ T Consensus 550 ~Pv~~i~~I~vti~~~p~~~~~~ 572 (581) T protein:vir:10 550 RPAYPLNYIVVRYSIAPETGDIT 572 (581) T ss_pred EecccceEEEEEEEEecCCCceE Confidence 99999999999999998888888 No 36 >protein:vir:80779 Length: 569 # NCBI annotation: putative tail sheath protein # Family: family:all:2449 # MgeID: mge:1885 # MgeName: phiEF24C # Cross-refs: genbank:acc:YP_001504132;genbank:gi:158079319;genbank:GeneID:5666428 Probab=100.00 E-value=1.4e-33 Score=200.74 Aligned_cols=510 Identities=12% Similarity=0.097 Sum_probs=253.7 Q ss_pred cccEEEEeecCCCcceEeecccCCCcceeeeeecccccccccCcccceeeEEEeeeeecccCCceeccceeEEEEEeecc Q lcl|Aclame:pro 183 SGLTLNYTVSKATTPWVYFAEYGTPTSSLTLYKGFYLEGIDLNSFNKQFVVSIENITVNREKGQVLYPSFDVVVHFRDIR 262 (742) Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (742) --+.+ |--.+-+.|-||.-|. ++.+.--.| +|+.--.++-. ..-|...++|++-++. .|+++- T Consensus 1 ~~~~~-~~~~~~~~Pgv~~~~~---~~~~~~~~~--------~~~~~~~~ig~--a~~G~~~~~~~~~~~~---~~~~~f 63 (569) T protein:vir:80 1 MAVEQ-FPRKKVSRPHTEITVD---TSGIGGSSS--------SSDKTLMLVGS--AKGGKPDTVYRFRNYQ---QAKQVL 63 (569) T ss_pred Ceeee-ecCCccccCceEEEEe---cCCCcCCCC--------CCceeEEEEEE--eCCCCCceeEEecCHH---HHHHHh Confidence 11111 3333344555555443 222222222 44432222211 1112222233332222 122221 Q ss_pred CCCCCccceeeeeeecC-------CCCCeeeecccCceEEE-EcCceEEecccccCCcceEEEEeccccccccccch-hh Q lcl|Aclame:pro 263 GVSANTEYIRFRQVNLN-------PESPNYIERVIGNMTFE-FDGERIVTGGEYPNQVPFLRVVVSQDIKQNVAGVE-KW 333 (742) Q Consensus 263 ~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~-~~g~~~vtG~~~~n~~p~L~~si~~~~~~~~ag~s-~~ 333 (742) +--.-.|-| ++-++ -+++-|..+|=.....+ ..|-..+++..+..|+..+++++.+.......... .. T Consensus 64 ~~g~l~~a~---~~a~~~~~~~~~~~~~~~~~rv~~a~~a~~~~~~~~~~a~~~g~~~n~i~v~l~~~~~~~~~~~~v~~ 140 (569) T protein:vir:80 64 RSGDLLDAI---ELAWNASDVNTASAGDILAVRVEDAKNATLTKGGLTFASTIYGVDANEIQVALEDNNLTHTKRLTVAF 140 (569) T ss_pred cCCchhHHH---HhhccCccccccCceEEEEEEcCCCeeeeeeccceeeeeeeccCCCceEEEEEecCcCCcceeeEEee Confidence 111122222 33333 33345555552222221 22444567766666666676666431110000000 00 Q ss_pred hhhhhhhheec-cc-------ceEEEEEEEEEeeeccccccccch----h-hh--eeeeecccccceee--eeeccccc- Q lcl|Aclame:pro 334 VPVGFEGIYSV-GD-------FTVIVNELTNVSIPVTDSAIIPPM----R-FT--RIEQITLSGGASFS--VISNQPYG- 395 (742) Q Consensus 334 ip~al~aI~av-g~-------~tv~v~~itnv~~p~tdsa~vp~~----~-~~--li~~~~l~~ga~~~--vl~~~~~~- 395 (742) .+.....+|+. |. ++.....++......+-++..... . .. .+....+..+..-. .+.....+ T Consensus 141 ~~~~~~~~~~~ig~v~si~ytg~~~~a~~~~~~~~~~~~a~~l~~~~g~~~~~~~~v~~~~~~~~~~~~~~~lv~~~~~~ 220 (569) T protein:vir:80 141 SKDGYKKVFDNLGKIFSIQYKGSEAQANFTIAQDSISKKATTLTLNVGSEPESTTEVMKYELGQGVYSETNVLVSAINSL 220 (569) T ss_pred ecCCCccccccccceeeEEEeeccccceEEeecCcCcceeEEEEEEecCCcceeEEEEeeccCCccchhhhhhhhhcCCc Confidence 00001111110 00 000000000000000000000000 0 00 00000011000000 00000000 Q ss_pred --ccccc---cccceeeeccCCcceeeecc----------cccccccccceeEeecccccccccceeeeccCCcceEEEe Q lcl|Aclame:pro 396 --FNIQD---SRHSYWLSPFKDDELIIGTE----------LVLPALDVSTEFGVSSWEEALPEFSFLMPFQGGSDGYIRV 460 (742) Q Consensus 396 --~~i~~---s~~~~~Ls~l~d~s~~v~td----------~~a~a~d~s~~v~l~~~~~~~p~a~~av~l~gGtdg~i~v 460 (742) +.... .........+++.+.+-... ......+.+..+.+...............++||+|+. T Consensus 221 ~~f~a~~~~~~~~~~~~~~~d~~~~~~~~t~~~~~~~~~~di~~~~~~~~~v~~~~~~~~~l~~~~~~~LtGG~dG~--- 297 (569) T protein:vir:80 221 PDWEAKFFPIGDKNLPTDALEAVTKVDVKTEAVFVGALAGDIAKQLEYNDYVTVAVDATKPVEDFELTNLTGGSDGT--- 297 (569) T ss_pred cCceEEEEecCCCcceehhccchhheeccccceeeehhHHHHHHhhcCCceEEEEecCCcceeeecceeecCCCCCC--- Confidence 00000 00000000011100000000 0000011122222221111111111122334443321 Q ss_pred cCCccccccccccccccccchhhHHHhhccCCccEEEEcCCCchHHHHHHHHHHHhhcC---ceEEEEECCCCCChHHHH Q lcl|Aclame:pro 461 DENEPDTIGRVKITPALLANYERLLPLLTEDQFDLVLTPYLTFADHAGTVNAFINRAEN---RFLYLFDIAGDDDTENLA 537 (742) Q Consensus 461 d~~~~~~ig~~~~~~~~~a~rtGL~AL~~~d~v~LL~aPg~t~s~v~aal~Al~a~a~~---R~~aI~D~p~~~~t~~~A 537 (742) . .......+.+|+.. +++.++ |...+..++..+.+||+++++ .+.++++.+.+. +.+.+ T Consensus 298 --------------~-~~~~~~~l~~le~~-~~~~i~-~~t~d~av~~~l~a~vkr~r~~g~~~~aVvg~~~~~-~~~~~ 359 (569) T protein:vir:80 298 --------------A-PESWANKFPLLANE-GGYYLV-PLTDKQAVHSEALAFVKDRTDNGDPMRIIVGGGTNE-TVEES 359 (569) T ss_pred --------------c-cchHHHHHHHHhhC-CcEEEE-ecCCChHHHHHHHHHHHHHHhCCCcEEEEecCCCCC-CHHHH Confidence 0 01123457777664 455554 445577888999999998854 244555555443 45667 Q ss_pred HHHHhccCCcEEEEEecceeeccccc-eeEech---HHHHHHHHhhhccCceeecCCceeeEee---eccccchhHHhhh Q lcl|Aclame:pro 538 ISLAGYINSSFATTFFPWVRRLTNKG-MRTVPA---SLAAYRSIRTTDPETGLAPVGARRGVVT---GEPVRQVDWEDLY 610 (742) Q Consensus 538 ~a~r~~~~S~~aaL~~PwVkv~d~~~-~~~vPp---SgavAGl~ArtD~e~Gv~~SPaN~~I~~---~~~ls~sE~d~LN 610 (742) ..+++++++.++++++||....+.+. ....|+ ++++||++|..+ +++|+.|..+.. ...+++.|++.|+ T Consensus 360 ~~~a~~~n~e~vv~v~~~~~~~~~~g~~~~~~~~~~aa~vAG~~A~~~----~~~S~T~k~i~~~~i~~~lt~~e~~~li 435 (569) T protein:vir:80 360 ITRATNLRDPRASLVGFSGTRKMDDGRLLKLPGYMMASQIAGIASGLE----VGEAITFKHFNVTSVDRVFESSQLDMLN 435 (569) T ss_pred HHHHhhcCCCeEEEEecCceeecCCCcceeechhhHHHHHHHHHhcCc----cccCccceeeccccccccCCHHHHHHHH Confidence 88899999999999999987665433 344444 778899998775 677888876642 2346889999999 Q ss_pred cCCceEEEEc-CCCEEEEcc----eec-CCCccccceeehhhhhHHHHHHHHHHH-HHhhcccCCHHHHHHHHHHHHHHH Q lcl|Aclame:pro 611 NNRINPIVRV-GNDVLLFGQ----KTM-LNVNSALNRINVRRLLIVMRNRISQIL-SSYLFENNTSENRLRAEALVRQYL 683 (742) Q Consensus 611 ~~GINtI~~f-g~G~rlWGn----RTl-as~D~~wrfInVRR~~d~Ie~sI~~a~-~~~VfEPNd~~l~~~V~~sInafL 683 (742) ++|+.++++. +++.++|.. .|. ...|+.|++++++|++|+|++.++..+ +||+++||+...|..|+..|+.|| T Consensus 436 ~~G~~~l~~~~~~~~~v~~~vn~itT~t~~~~~~~~~i~viRv~D~i~~dir~~~~~~yiGk~nn~~~r~~v~~~i~~~L 515 (569) T protein:vir:80 436 ESGVISIEFVRNRTLTAFRVVQDVTTYNDKSDPVKNEMSVGEANDFLVSELKIELDNNFIGTKVIDTSASLIKNFIQSFL 515 (569) T ss_pred hCCeEEEEEecCceEEEEEEeccceecCCCCCchhhhhhhhHHHHHHHHHHHHHHHhhcCcccCChhHHHHHHHHHHHHH Confidence 9999999875 445556643 222 246788999999999999999998876 589999999999999999999999 Q ss_pred HHHHhCCceeeEEEEEcCCCCHHHhhCCEEEEEEEEEecCCceEEEEEEEEeeceeec Q lcl|Aclame:pro 684 ESLRLRGAVTDYEVAIDSVTTPTDIDNNTLRARVTVQPARSIEYIDITFVITPTGVEI 741 (742) Q Consensus 684 ~~L~~~GAL~Gf~V~~DetNtp~dI~~GrL~i~I~vaP~~PAEfI~l~f~it~tG~~f 741 (742) .+||++|+|.||+. ++-+.++..+++++++.++|+.|||+|.+++++.+..++- T Consensus 516 ~~l~~~gaI~~~~~----~dv~v~~~~d~~~v~~~v~Pv~~~ekI~~ti~~~~~~~~~ 569 (569) T protein:vir:80 516 DNKKRAREIQDYTP----EEVQVVLEGDVASISMTVMPIRSLNKITVQLVYKQQILTA 569 (569) T ss_pred HHHHhCCcccCCCc----cceEEEecCCEEEEEEEEEEcccccEEEEEEEEeeeeecC Confidence 99999999999752 1122235667999999999999999999999999888777 No 37 >protein:vir:80488 Length: 562 # NCBI annotation: Tsh # Family: family:all:2449 # MgeID: mge:1883 # MgeName: A511 # Cross-refs: genbank:acc:YP_001468473;genbank:gi:157325048;genbank:GeneID:5601446 Probab=100.00 E-value=1.6e-32 Score=194.83 Aligned_cols=518 Identities=14% Similarity=0.099 Sum_probs=258.7 Q ss_pred EEEEe-eceeEeecccceeeeeeeccccceEEEEeecCccccEEEEeecCCCcceEeecccCCCccee---------eee Q lcl|Aclame:pro 145 LTINL-NAPSVTLPSNIVPLFFYYEPYTGSITLQSSVNYSGLTLNYTVSKATTPWVYFAEYGTPTSSL---------TLY 214 (742) Q Consensus 145 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~ 214 (742) .-|++ +--++.-|+--+ . ..+|++.-.=-++....=.|=.|+-|.|..-. .+| T Consensus 1 ~~~~~~~~~~~~~pgv~~-------------~----~~~s~~~~~~~~~~~~~~~ig~a~~G~~~~~~~~~~~~~~~~~f 63 (562) T protein:vir:80 1 MAIEIYPRKPVSRPHTEI-------------S----VDTSGIGGSSSGSEKILCLVGSATGGKPNAVYKVRNYSQAKSVF 63 (562) T ss_pred CeeeeeCCCcccCCceEE-------------E----EecCCcccCCCCCCceEEEEEEeCCCCcceeEEEccHHHHHHHh Confidence 11211 111222222211 1 12333333323333334446667777664431 234 Q ss_pred e-cccccccc-------cCcccceeeEEEeeeeecccCCceeccceeEEEEEe-eccCCCCCccceeeeeee-cCCCCCe Q lcl|Aclame:pro 215 K-GFYLEGID-------LNSFNKQFVVSIENITVNREKGQVLYPSFDVVVHFR-DIRGVSANTEYIRFRQVN-LNPESPN 284 (742) Q Consensus 215 ~-~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~ 284 (742) . |-+++.|. .|+...-+++.+++ --+++..... ++|. -+.|.-+| .||..-.+ =.|.+++ T Consensus 64 ~~g~l~~~i~~a~~~~~~~g~~~~~~~rv~~----a~~a~~~~~~----~~~~~~~~g~~~n--~i~v~~~~~~~~~~~~ 133 (562) T protein:vir:80 64 RSGELLDAIERAWNPGEGTGAGDILAMRVEE----AKEATFEAEG----VKVSSTIYGADAN--DIQVALEDNTITGTKR 133 (562) T ss_pred cCCChHHHHHHhcccccccCceEEEEEEcCC----CCcceEEecc----eEEEEeecccCCC--ceEEEEecCCCCCCcc Confidence 2 44455553 36554434444433 2344554443 3333 23344444 45332222 1122221 Q ss_pred eeecccCceEEEEcCceEEecccccCCcceEEEEecccccc---ccccchhhhhhhhhhheecccceEEEEEEEEEeeec Q lcl|Aclame:pro 285 YIERVIGNMTFEFDGERIVTGGEYPNQVPFLRVVVSQDIKQ---NVAGVEKWVPVGFEGIYSVGDFTVIVNELTNVSIPV 361 (742) Q Consensus 285 ~~~~~~~~~~~~~~g~~~vtG~~~~n~~p~L~~si~~~~~~---~~ag~s~~ip~al~aI~avg~~tv~v~~itnv~~p~ 361 (742) . ++.....+ .+-..-|.++.+.+..+...+. +..+.... ..+..-....|..++...++.+...+. T Consensus 134 ~--------~v~~~~~~--~~ev~~~~g~v~~i~y~g~~~~a~~~i~~~~~~-~~a~~l~~~~g~~~v~~~~l~~g~~~~ 202 (562) T protein:vir:80 134 L--------SIVFAKER--VNQVYDNLGSIFSIKYKGTEASATFTVAVDPVT-FKATKLTLKAGDKTVKEYDLGSGAYAE 202 (562) T ss_pred e--------EEEecCCc--ceEEeeccCceeeeeeccccccceeEEEecCcc-ceEEEEEEecCCcceeEEEeCCCccch Confidence 1 11111110 0111112222222211111110 00000000 001111111122222221111111000 Q ss_pred cccccccchhhhee----eeecccccceeeeeecccccccccccccceeeeccCCcceeeecccccccccccceeEeecc Q lcl|Aclame:pro 362 TDSAIIPPMRFTRI----EQITLSGGASFSVISNQPYGFNIQDSRHSYWLSPFKDDELIIGTELVLPALDVSTEFGVSSW 437 (742) Q Consensus 362 tdsa~vp~~~~~li----~~~~l~~ga~~~vl~~~~~~~~i~~s~~~~~Ls~l~d~s~~v~td~~a~a~d~s~~v~l~~~ 437 (742) .... ....+.+ -++.-..+....+...+........+. ...+..... +. ......+..+.+... T Consensus 203 ~~~l---~~~i~~~~~~tAky~g~~~n~i~~~~~d~~~~~~~kt~-~~~v~~~~~-------d~-~~~~~~n~~v~~~~~ 270 (562) T protein:vir:80 203 TNVL---ISDINNLPDFEAKFFPIGDKNLTTDNFDAQIDVDIKTK-EAYVKAVGG-------DI-EKQTAYNGYVEFEFD 270 (562) T ss_pred hhhh---hhhhccccceEEEecccCCceeeecccccchhhhcccc-eeeeeehhh-------hh-hhcccccceEEEEec Confidence 0000 0000000 000000000000000000000000000 000000000 00 000011122222111 Q ss_pred cccccccceeeeccCCcceEEEecCCccccccccccccccccchhhHHHhhccCCccEEEEcCCCchHHHHHHHHHHHhh Q lcl|Aclame:pro 438 EEALPEFSFLMPFQGGSDGYIRVDENEPDTIGRVKITPALLANYERLLPLLTEDQFDLVLTPYLTFADHAGTVNAFINRA 517 (742) Q Consensus 438 ~~~~p~a~~av~l~gGtdg~i~vd~~~~~~ig~~~~~~~~~a~rtGL~AL~~~d~v~LL~aPg~t~s~v~aal~Al~a~a 517 (742) ............++||+||... ....+.+.+|+..+ ...++ +...+..++..+.+||.++ T Consensus 271 ~~~~la~~~~~~LtGG~dG~~~------------------~~~~dal~~Le~~~-~~~i~-~~t~d~ai~~~~~a~vkr~ 330 (562) T protein:vir:80 271 RSKEIANFPLTKLTGGDNGTIP------------------ESWADKFSYFANEG-GYYLV-PLTSKQAVHAEALQFVRDC 330 (562) T ss_pred cCccccccceeeeeCCCCCCcc------------------ccHHHHHHHHHhCC-cEEEE-ecCCChHHHHHHHHHHHHH Confidence 1111111233455666655210 01234677877664 34443 3445677888899999888 Q ss_pred cC---ceEEEEECCCCCChHHHHHHHHhccCCcEEEEEecceeeccc-cceeEech---HHHHHHHHhhhccCceeecCC Q lcl|Aclame:pro 518 EN---RFLYLFDIAGDDDTENLAISLAGYINSSFATTFFPWVRRLTN-KGMRTVPA---SLAAYRSIRTTDPETGLAPVG 590 (742) Q Consensus 518 ~~---R~~aI~D~p~~~~t~~~A~a~r~~~~S~~aaL~~PwVkv~d~-~~~~~vPp---SgavAGl~ArtD~e~Gv~~SP 590 (742) ++ ++.+++..+.+. +.+.+......+++.+.+.++|+....+. +.....|+ ++++||++|..| ++.|| T Consensus 331 r~~g~~~~aVvg~~~~~-~~~~~~~~a~~~n~e~vv~v~~~~~~~~~~~~~~~~~~~~~aa~vAGl~Ag~~----~~~S~ 405 (562) T protein:vir:80 331 SYNGNPMRVFVGGGIGE-SMEQLFTRAIGLQNERAGLIGFSGTVKMDDGRSLKMPGYMFAAQVAGLTCGLE----IGEAI 405 (562) T ss_pred HhCCCeEEEEecCCCCC-CHHHHHHHhhhcCCCeEEEEecCeeEECCCCceeeechhHHHHHHHHHHhcCc----cccCc Confidence 54 244555555443 45667788889999999999988665443 33445555 889999999887 56788 Q ss_pred ceeeEee---eccccchhHHhhhcCCceEEEEc-CCCEEEEc----ceec-CCCccccceeehhhhhHHHHHHHHHHH-H Q lcl|Aclame:pro 591 ARRGVVT---GEPVRQVDWEDLYNNRINPIVRV-GNDVLLFG----QKTM-LNVNSALNRINVRRLLIVMRNRISQIL-S 660 (742) Q Consensus 591 aN~~I~~---~~~ls~sE~d~LN~~GINtI~~f-g~G~rlWG----nRTl-as~D~~wrfInVRR~~d~Ie~sI~~a~-~ 660 (742) .|..+.+ ...+++.|++.|+++|+.+++.. +++.+.|. -.|. ..+|+.|++|+++|++|+|++.+++.+ + T Consensus 406 T~~~i~~~~v~~~lt~~e~~~li~~G~l~l~~~~~~~v~~~riv~~itT~t~~~~~~~~ki~viRv~D~i~~dir~~~~~ 485 (562) T protein:vir:80 406 TFKNIAIETLDTIYEGSQLDQLNESGIITAEFVRNRAVTNFRIVDDVTTFNDKTDPVKSEIGVGEANDFLVSELKISLDN 485 (562) T ss_pred cceeeccccccccCCHHHHHHHHhCCeEEEEEecCCcEEEEEeeccceeccCCCCchhhhhhhhHHHHHHHHHHHHHHHh Confidence 8887753 23468899999999999999875 45556662 2333 256889999999999999999998887 5 Q ss_pred HhhcccCCHHHHHHHHHHHHHHHHHHHhCCceeeEEEEEcCCCCHHHhhCCEEEEEEEEEecCCceEEEEEEEEeeceee Q lcl|Aclame:pro 661 SYLFENNTSENRLRAEALVRQYLESLRLRGAVTDYEVAIDSVTTPTDIDNNTLRARVTVQPARSIEYIDITFVITPTGVE 740 (742) Q Consensus 661 ~~VfEPNd~~l~~~V~~sInafL~~L~~~GAL~Gf~V~~DetNtp~dI~~GrL~i~I~vaP~~PAEfI~l~f~it~tG~~ 740 (742) ||++||||...|.+|+..|+.||.+||++|+|.||+.. +-+.+..++++++++.++|+.|||+|.+++++.+..++ T Consensus 486 ~yIGk~Nn~~~r~~v~~~i~~~L~~l~~~gaI~~~~~~----dv~v~~~~d~~~v~~~v~Pv~~mekIy~ti~~~~~~~~ 561 (562) T protein:vir:80 486 EYIGTKIIDTSASLVKNFVQSFLDRKKLAKEIQDYSPE----EVQVVIEGDIARISLTVFPIRSMKKIEVSLVYRQQILT 561 (562) T ss_pred cCCccccChHHHHHHHHHHHHHHHHHHhCCcccCCCcc----ceEEEecCCEEEEEEEEEEcccceEEEEEEEEEeeeec Confidence 89999999999999999999999999999999998531 11223566789999999999999999999999988877 Q ss_pred c Q lcl|Aclame:pro 741 I 741 (742) Q Consensus 741 f 741 (742) - T Consensus 562 ~ 562 (562) T protein:vir:80 562 A 562 (562) T ss_pred C Confidence 7 No 38 >protein:vir:63742 Length: 562 # NCBI annotation: Tsh # Family: family:all:2449 # MgeID: mge:1517 # MgeName: P100 # Cross-refs: genbank:gi:82547629;genbank:GeneID:3783475 Probab=100.00 E-value=6.4e-33 Score=197.09 Aligned_cols=516 Identities=14% Similarity=0.102 Sum_probs=262.0 Q ss_pred ecccceeeeeeeccccceEEEEeecCccccEEEEeecCCCcceEeecccCCCcce--e-------eeee-ccccccc--- Q lcl|Aclame:pro 156 LPSNIVPLFFYYEPYTGSITLQSSVNYSGLTLNYTVSKATTPWVYFAEYGTPTSS--L-------TLYK-GFYLEGI--- 222 (742) Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-------~~~~-~~~~~~~--- 222 (742) ++-+|-|...+=-|-. .|. ..+|++.-.=-++..+.=.|=.||-|.|..- + .+|. |-+++.| T Consensus 1 ~~~~~~~~~~~~~Pgv-~~~----~~~s~~~~~~~~~~~~~~~iG~a~~G~~~~~~~~~~~~~~~~~fg~g~l~~~i~~a 75 (562) T protein:vir:63 1 MAIEIYPRKPVSRPHT-EIS----VDTSGIGGSSSGSEKILCLVGSATGGKPNAVYKVRNYSQAKSVFRSGELLDAIERA 75 (562) T ss_pred CeeeeeCCCcccCCce-EEE----EecCCCcccCCCCCceEEEEEEeCCCCCceeEEEccHHHHHHHhcCCchHHHHHHh Confidence 3333334443333321 011 1133333222233333344566777766432 1 1332 3445665 Q ss_pred -c---cCcccceeeEEEeeeeecccCCceeccceeEEEEEee-ccCCCCCccceeeeeeec-CCCCCeeeecccCceEEE Q lcl|Aclame:pro 223 -D---LNSFNKQFVVSIENITVNREKGQVLYPSFDVVVHFRD-IRGVSANTEYIRFRQVNL-NPESPNYIERVIGNMTFE 296 (742) Q Consensus 223 -~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 296 (742) | .|+..+-+++.+++. -+++...+. ++|++ +.|.-+| .||..-.+= .|.+++ +++. T Consensus 76 ~~~~~~~g~~~~~~~rv~~a----~~a~~~~~~----~~~~a~~~g~~~n--~i~v~~~~~~~~~~~~--------~~v~ 137 (562) T protein:vir:63 76 WNPGEGTGAGDILAMRVEEA----KEATFEAEG----VKVSSTIYGADAN--DIQVALEDNTITGTKR--------LSIV 137 (562) T ss_pred ccccccCCceEEEEEEcCCC----ccceeEecc----eeEEEeecccCCC--eEEEEEecCCCCCCcc--------eEEE Confidence 3 466665555555443 344444444 34443 3344444 452211110 122222 1111 Q ss_pred EcCceEEecccccCCcceEEEEecccccc---ccccchhhhhhhhhhheecccceEEEEEEEEEeeeccccccccchhhh Q lcl|Aclame:pro 297 FDGERIVTGGEYPNQVPFLRVVVSQDIKQ---NVAGVEKWVPVGFEGIYSVGDFTVIVNELTNVSIPVTDSAIIPPMRFT 373 (742) Q Consensus 297 ~~g~~~vtG~~~~n~~p~L~~si~~~~~~---~~ag~s~~ip~al~aI~avg~~tv~v~~itnv~~p~tdsa~vp~~~~~ 373 (742) ..+.+ .+-..-|-++.+.+..+...+. ...+.... -.+..--...|..++...++.+...+.+... ....+ T Consensus 138 ~~~~~--~~ev~~~~g~V~~i~y~g~~~~~~~~v~~~~~~-~~a~~l~~~~g~~~v~~~~L~~g~~~~~~~l---~~~in 211 (562) T protein:vir:63 138 FAKER--VNQVYDNLGSIFSIKYKGTEASATFTVAVDPVT-FKATKLTLKAGDKTVKEYDLGSGAYAETNVL---ISDIN 211 (562) T ss_pred ecCCC--cchhhhhccceeeeeeecccccceEEEEecCcc-eeEEEEEeecCCcceeEEEecCCccchhHHH---HHhhc Confidence 11111 1211222222222211111110 00000000 0000001111222222222211111110000 00000 Q ss_pred ee----eeecccccceeeeee-cccccccccccccceeeeccCCcceeeeccc--ccccccccceeEeecccccccccce Q lcl|Aclame:pro 374 RI----EQITLSGGASFSVIS-NQPYGFNIQDSRHSYWLSPFKDDELIIGTEL--VLPALDVSTEFGVSSWEEALPEFSF 446 (742) Q Consensus 374 li----~~~~l~~ga~~~vl~-~~~~~~~i~~s~~~~~Ls~l~d~s~~v~td~--~a~a~d~s~~v~l~~~~~~~p~a~~ 446 (742) .+ -++....+....+.. +..... ..+....++.+.. .......+..+.............. T Consensus 212 ~~~~~~aky~~~~gn~i~~~~~d~~~~~------------~vkt~~~~v~t~~~d~~~~~~~~~~v~~~~~~~~~la~~~ 279 (562) T protein:vir:63 212 NLPDFEAKFFPIGDKNLTTDNFDAQIDV------------DIKTKEAYVKAVGGDIEKQTAYNGYVDFEFDRSKEIANFP 279 (562) T ss_pred cccceEEEeeccCCceeeeecccccccc------------chhhhhhhhhhhhhhhhhcccccceeeeeeccccceeccc Confidence 00 000000111000000 000000 0000000000000 0000001111111110000111112 Q ss_pred eeeccCCcceEEEecCCccccccccccccccccchhhHHHhhccCCccEEEEcCCCchHHHHHHHHHHHhhcC---ceEE Q lcl|Aclame:pro 447 LMPFQGGSDGYIRVDENEPDTIGRVKITPALLANYERLLPLLTEDQFDLVLTPYLTFADHAGTVNAFINRAEN---RFLY 523 (742) Q Consensus 447 av~l~gGtdg~i~vd~~~~~~ig~~~~~~~~~a~rtGL~AL~~~d~v~LL~aPg~t~s~v~aal~Al~a~a~~---R~~a 523 (742) ...++||++|... ......+.+|+..+ +..+ +|...+..++..+.+||..+++ ++.+ T Consensus 280 ~~~LtGG~dGt~~------------------~~~~~al~ale~~~-~~~i-~~~t~d~av~~~l~a~vkr~~~~g~~~~a 339 (562) T protein:vir:63 280 LTKLTGGDNGTIP------------------ESWADKFSYFANEG-GYYL-VPLTSKQAVHAEALQFVRDCSYNGNPMRV 339 (562) T ss_pred ceeeecCCCCCch------------------hhHHHHHHHHHhCC-cEEE-EecCCCHHHHHHHHHHHHHHHhCCCcEEE Confidence 2344455444110 01234677777654 3443 4566677888999999988764 2455 Q ss_pred EEECCCCCChHHHHHHHHhccCCcEEEEEecceeeccc-cceeEech---HHHHHHHHhhhccCceeecCCceeeEee-- Q lcl|Aclame:pro 524 LFDIAGDDDTENLAISLAGYINSSFATTFFPWVRRLTN-KGMRTVPA---SLAAYRSIRTTDPETGLAPVGARRGVVT-- 597 (742) Q Consensus 524 I~D~p~~~~t~~~A~a~r~~~~S~~aaL~~PwVkv~d~-~~~~~vPp---SgavAGl~ArtD~e~Gv~~SPaN~~I~~-- 597 (742) +++.+.+. +.+.+......+++.+.+.++|+....+. ......|+ ++++||++|..| +++|+.|..+.. T Consensus 340 Vlg~~~~~-~~~~~~~~a~~~n~ervv~v~~~~~~~~~~~~~~~~~~~~~aa~vAGl~A~~~----~~~SlT~~~i~~~~ 414 (562) T protein:vir:63 340 FVGGGIGE-SMEQLFTRAIGLQNERAGLIGFSGTVKMDDGRSLKMPGYMFAAQVAGLTCGLE----IGEAITFKNIAIET 414 (562) T ss_pred EecCCCCC-CHHHHHHHhhhcCCCcEEEEecCeeEECCCCceeeechhHHHHHHHHHhhcCc----hhcCccceeecccc Confidence 66655544 44556778889999999999998765543 33445565 789999999887 577888877642 Q ss_pred -eccccchhHHhhhcCCceEEEEc-CCCEEEEcc-eec----CCCccccceeehhhhhHHHHHHHHHHHH-HhhcccCCH Q lcl|Aclame:pro 598 -GEPVRQVDWEDLYNNRINPIVRV-GNDVLLFGQ-KTM----LNVNSALNRINVRRLLIVMRNRISQILS-SYLFENNTS 669 (742) Q Consensus 598 -~~~ls~sE~d~LN~~GINtI~~f-g~G~rlWGn-RTl----as~D~~wrfInVRR~~d~Ie~sI~~a~~-~~VfEPNd~ 669 (742) ...+++.|++.|+++|+.++... +++.++|.. +++ ..+|+.|++|+++|++|+|++.++..+. ||+++|||. T Consensus 415 v~~~~t~~e~~~li~~Gv~~l~~~~~~~v~~~~iv~~itT~t~~~~~~~~ki~viRv~D~i~~dir~~~~~~yiGk~Nn~ 494 (562) T protein:vir:63 415 LDTIYEGSQLDQLNESGIITAEFVRNRAVTNFRIVDDVTTFNDKTDPVKSEIGVGEANDFLVSELKISLDNEYIGTKIID 494 (562) T ss_pred ccccCCHHHHHHHHhCCeEEEEEecCCcEEEEEeeccceecCCCCCchhhhhhhhHHHHHHHHHHHHHHHhcCCccccCh Confidence 23578899999999999999875 456666654 332 2567889999999999999999988765 899999999 Q ss_pred HHHHHHHHHHHHHHHHHHhCCceeeEEEEEcCCCCHHHhhCCEEEEEEEEEecCCceEEEEEEEEeeceeec Q lcl|Aclame:pro 670 ENRLRAEALVRQYLESLRLRGAVTDYEVAIDSVTTPTDIDNNTLRARVTVQPARSIEYIDITFVITPTGVEI 741 (742) Q Consensus 670 ~l~~~V~~sInafL~~L~~~GAL~Gf~V~~DetNtp~dI~~GrL~i~I~vaP~~PAEfI~l~f~it~tG~~f 741 (742) ..|.+|+..|..||.+||++|+|.||+.. .-+.+..++++++++.++|+.|+|+|.+++++.+..++- T Consensus 495 ~~r~~v~~~i~~~L~~l~~~gaI~~~~~~----dv~v~~~~d~~~v~~~v~pv~~mekIy~ti~~~~~~~~~ 562 (562) T protein:vir:63 495 TSASLVKNFVQSFLDRKKLAKEIQDYSPE----EVQVVIEGDVARISLTVFPIRSMKKIEVSLVYRQQILTA 562 (562) T ss_pred HHHHHHHHHHHHHHHHHHhCCcccCCCcc----ceEEEecCCEEEEEEEEEEcccceEEEEEEEEeeeeecC Confidence 99999999999999999999999998531 112235567899999999999999999999999888777 No 39 >protein:vir:95741 Length: 587 # NCBI annotation: ORF011 # Family: family:all:2449 # MgeID: mge:1577 # MgeName: G1 # Cross-refs: genbank:acc:YP_240910;genbank:gi:66394960;genbank:GeneID:5132682 Probab=99.96 E-value=3.8e-29 Score=176.38 Aligned_cols=526 Identities=13% Similarity=0.116 Sum_probs=245.6 Q ss_pred EEEEe-eceeEeecccceeeeeeeccccceEEEEeecCccccEEEEeecCCCcceEeecccCCCcceeeeee-------- Q lcl|Aclame:pro 145 LTINL-NAPSVTLPSNIVPLFFYYEPYTGSITLQSSVNYSGLTLNYTVSKATTPWVYFAEYGTPTSSLTLYK-------- 215 (742) Q Consensus 145 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------- 215 (742) .-|++ +.-+++.|+--.+ ..+||++..=-++.-+.=.+=.||-|.|.....+++ T Consensus 1 ~a~~~~~~~~~~~pgv~~~-----------------~~~~~~~~~~~~~~~~~~~~g~a~~G~~~~~~~~~~~~~~~~~~ 63 (587) T protein:vir:95 1 MAVEPFPRRPITRPHASIE-----------------VDTSGIGGSAGSSEKVFCLIGQAEGGEPNTVYELRNYSQAKRLF 63 (587) T ss_pred CcccccCCcccccCceEEE-----------------EecCCccccCCCCCceEEEEEEeCCCCCceeEEeccHHHHHHHh Confidence 11221 2222333332211 112333322222223333355577787765554322 Q ss_pred --ccccccc----c---cCcccceeeEEEeeeeecccCCceeccceeEEEEEeeccCCCCCccceeeeeeecCCCCCeee Q lcl|Aclame:pro 216 --GFYLEGI----D---LNSFNKQFVVSIENITVNREKGQVLYPSFDVVVHFRDIRGVSANTEYIRFRQVNLNPESPNYI 286 (742) Q Consensus 216 --~~~~~~~----~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (742) |-.++.| | .|+- ++ ++++| +-+--+.+...+. ++|.+ .-+-+.-..|+.+--+=++.++- T Consensus 64 ~~g~l~~~~~~a~~~~~~~g~-~~-~~~~r--v~~~~~a~~~~~~----l~~~a-~~~G~~gN~i~v~~~~~~~~~~~-- 132 (587) T protein:vir:95 64 RSGELLDAIELAWGSNPNYTA-GR-ILAMR--IEDAKPASAEIGG----LKITS-KIYGNVANNIQVGLEKNTLSDSL-- 132 (587) T ss_pred cCcchHHHHHHHhccccCCCc-eE-EEEEE--cCCCceeEEEecC----eEEEE-ecccccccceEEEEecCCCCCce-- Confidence 2233443 2 1332 22 22233 1122233444443 22332 11222222443322211111111 Q ss_pred ecccCceEE--EEcCceEEecccccCCcceEEEEecccccc-----ccccchhhhhhhhhhheecccceEEEEEEEEEee Q lcl|Aclame:pro 287 ERVIGNMTF--EFDGERIVTGGEYPNQVPFLRVVVSQDIKQ-----NVAGVEKWVPVGFEGIYSVGDFTVIVNELTNVSI 359 (742) Q Consensus 287 ~~~~~~~~~--~~~g~~~vtG~~~~n~~p~L~~si~~~~~~-----~~ag~s~~ip~al~aI~avg~~tv~v~~itnv~~ 359 (742) +.++ ..++..- + +=|-++ .+++.....+ +..+..... .+..-.+..|..++..-++.+... T Consensus 133 -----~~~~~~~~~~~~~-~---~~~~g~--v~si~y~g~~~~~~~~v~~~~~t~-~a~~~~l~~g~~~v~~yrL~~g~~ 200 (587) T protein:vir:95 133 -----RLRVIFQDDRFNE-V---YDNIGN--IFTIKYKGEEANATFSVEHDEETQ-KASRLVLKVGDQEVKSYDLTGGAY 200 (587) T ss_pred -----eEEEEEeccccee-e---eeeccc--eeeeeeeccccccceeeeecccce-eeeeeeeecCCceEEEEEecCCch Confidence 1111 1111110 0 001111 0111100000 000000000 000011111222222222221111 Q ss_pred eccccc-----ccc-------chhhheeeeecccccceeeeeecccccccccccccc-------eeeeccCCcceeeecc Q lcl|Aclame:pro 360 PVTDSA-----IIP-------PMRFTRIEQITLSGGASFSVISNQPYGFNIQDSRHS-------YWLSPFKDDELIIGTE 420 (742) Q Consensus 360 p~tdsa-----~vp-------~~~~~li~~~~l~~ga~~~vl~~~~~~~~i~~s~~~-------~~Ls~l~d~s~~v~td 420 (742) +.+... .++ +...+.++......-..+.+......-......... ..+...........+ T Consensus 201 ~~~~~~~~~in~~~~~tAky~g~~~~~i~~~~~~~~~~~~v~~~~~~v~a~~~d~~~~~~~~~~v~~~~~~g~~~~~~~- 279 (587) T protein:vir:95 201 DYTNAIITDINQLPDFEAKLSPFGDKNLESSKLDKIENANIKDKAVYVKAVFGDLEKQTAYNGIVSFEQLNAEGEVPSN- 279 (587) T ss_pred HHHHHHHHhhccccceEEEEecccCceeEEeecCcccccceehhhhhhhhhhcceeeeeeceeeeeeecccccceeccc- Confidence 110000 000 000000000000000000000000000000000000 000000000000000 Q ss_pred cccccccccceeEeecccccccccceeeeccCCcceEEEecCCccccccccccccccccchhhHHHhhccCCccEEEEcC Q lcl|Aclame:pro 421 LVLPALDVSTEFGVSSWEEALPEFSFLMPFQGGSDGYIRVDENEPDTIGRVKITPALLANYERLLPLLTEDQFDLVLTPY 500 (742) Q Consensus 421 ~~a~a~d~s~~v~l~~~~~~~p~a~~av~l~gGtdg~i~vd~~~~~~ig~~~~~~~~~a~rtGL~AL~~~d~v~LL~aPg 500 (742) ...........+....+.. .........++||+||.. . ......|.+|+.. +++.++ |. T Consensus 280 ~~~~~~~~~a~~~~~~~~~-~~a~~~~t~LtGG~dG~~-----------------~-~~y~~~l~ale~~-~~~~i~-~~ 338 (587) T protein:vir:95 280 VEVEAGEESATVTATSPIK-TIEPFELTKLKGGTNGEP-----------------P-ATWADKLDKFAHE-GGYYIV-PL 338 (587) T ss_pred hhhhhcccchheecccccc-ceeccceeeeecCCCCCC-----------------c-ccHHHHHHHHHhC-CcEEEE-ec Confidence 0000000000000110000 000111123444444310 0 0123467787765 455554 45 Q ss_pred CCchHHHHHHHHHHHhhcC---ceEEEEECCCCCChHHHHHHHHhccCCcEEEEEecceeeccc-cceeEech---HHHH Q lcl|Aclame:pro 501 LTFADHAGTVNAFINRAEN---RFLYLFDIAGDDDTENLAISLAGYINSSFATTFFPWVRRLTN-KGMRTVPA---SLAA 573 (742) Q Consensus 501 ~t~s~v~aal~Al~a~a~~---R~~aI~D~p~~~~t~~~A~a~r~~~~S~~aaL~~PwVkv~d~-~~~~~vPp---Sgav 573 (742) ..++.+++.+.+||..+++ ++.+++..+.+ ++.+.+...+..+++.+.++++|+...... +.....|+ ++++ T Consensus 339 t~d~~v~a~l~a~vk~~~~~g~~~~aVvg~~~~-~~~~~~~~~a~~~n~ervi~v~~~~~~~~~dg~~~~~~~~~~aa~v 417 (587) T protein:vir:95 339 SSKQSVHAEVASFVKERSDAGEPMRAIVGGGFN-ESKEQLFGRQESLSNPRVSLVANSGTFVMDDGRKNHVPAYMVAVAL 417 (587) T ss_pred CCCHHHHHHHHHHHHHHHhCCCcEEEEEcCCCC-CCHHHHHHHHhhcCCCcEEEecccceEecCCCceeeechHHHHHHH Confidence 5677888999999988854 24455554443 345667788899999999999887654332 33445666 7899 Q ss_pred HHHHhhhccCceeecCCceeeEee---eccccchhHHhhhcCCceEEEEc-CC---CEE-EEcceecC-CCccccceeeh Q lcl|Aclame:pro 574 YRSIRTTDPETGLAPVGARRGVVT---GEPVRQVDWEDLYNNRINPIVRV-GN---DVL-LFGQKTML-NVNSALNRINV 644 (742) Q Consensus 574 AGl~ArtD~e~Gv~~SPaN~~I~~---~~~ls~sE~d~LN~~GINtI~~f-g~---G~r-lWGnRTla-s~D~~wrfInV 644 (742) ||++|..| +++|+.|..+.. ...+++.|++.|+++|+.++... ++ +++ +.|-.|.. .+|+.|+++++ T Consensus 418 AGl~Ag~~----~~~SlT~~~i~~~~v~~~~t~~e~e~ai~~Gvl~l~~~~~~~~~~vriv~~itT~t~~~d~~~~~i~v 493 (587) T protein:vir:95 418 GGLASGLE----IGESITFKPLRVSSLDQIYESIDLDELNENGIISIEFVRNRTNTFFRIVDDVTTFNDKSDPVKAEMAV 493 (587) T ss_pred HHHHhcCc----hhcCccceeeecccccccCCHHHHHHHHhCCeEEEEEecCCcceEEEEeecceeccCCCCcchhhhhh Confidence 99999887 456777766542 23467899999999999999753 33 244 35656653 56788999999 Q ss_pred hhhhHHHHHHHHHHH-HHhhcccCCHHHHHHHHHHHHHHHHHHHhCCceeeEEEEEcCCCCHHHhhCCEEEEEEEEEecC Q lcl|Aclame:pro 645 RRLLIVMRNRISQIL-SSYLFENNTSENRLRAEALVRQYLESLRLRGAVTDYEVAIDSVTTPTDIDNNTLRARVTVQPAR 723 (742) Q Consensus 645 RR~~d~Ie~sI~~a~-~~~VfEPNd~~l~~~V~~sInafL~~L~~~GAL~Gf~V~~DetNtp~dI~~GrL~i~I~vaP~~ 723 (742) +|++|+|++.+++.+ +||++|||+...|..|+..|..||.+||++|+|.+|+.. +-..+....++++++.++|+. T Consensus 494 iRv~D~i~~dir~~~~~~~iGk~nn~~~r~~v~~~i~~~L~~l~~~gaI~~~~~~----dv~v~~~~d~~~v~~~v~Pv~ 569 (587) T protein:vir:95 494 GEANDFLVSELKVQLEDQFIGTRTINTSASIIKDFIQSYLGRKKRDNEIQDFPAE----DVQVIVEGNEARISMTVYPIR 569 (587) T ss_pred hhhHHHHHHHHHHHHHhhCCccccchHHHHHHHHHHHHHHHHHHhCCcccCCCcc----ceEEEecCCEEEEEEEEEEcc Confidence 999999999999886 689999999999999999999999999999999998541 111224456899999999999 Q ss_pred CceEEEEEEEEeeceeec Q lcl|Aclame:pro 724 SIEYIDITFVITPTGVEI 741 (742) Q Consensus 724 PAEfI~l~f~it~tG~~f 741 (742) |+|+|.+++++.+..++- T Consensus 570 ~mekI~vt~~~~~~~~~~ 587 (587) T protein:vir:95 570 SFKKISVSLVYKQQTLQA 587 (587) T ss_pred cceEEEEEEEEeeeeecC Confidence 999999999998777666 No 40 >protein:vir:99306 Length: 587 # NCBI annotation: putative major tail sheath protein # Family: family:all:2449 # MgeID: mge:1655 # MgeName: K # Cross-refs: genbank:acc:YP_024479;genbank:gi:48696438;genbank:GeneID:2948034 Probab=99.96 E-value=2.1e-28 Score=172.36 Aligned_cols=528 Identities=15% Similarity=0.133 Sum_probs=242.2 Q ss_pred EEEEe-eceeEeecccceeeeeeeccccceEEEEeecCccccEEEEeecCCCcceEeecccCCCcceeee---------e Q lcl|Aclame:pro 145 LTINL-NAPSVTLPSNIVPLFFYYEPYTGSITLQSSVNYSGLTLNYTVSKATTPWVYFAEYGTPTSSLTL---------Y 214 (742) Q Consensus 145 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~ 214 (742) .-|++ +.-+++-|+--++ ..+|+++..=-++.-+.=.+=.||-|.|..-..+ | T Consensus 1 ~a~~~~~~~~~~~pgv~~~-----------------~~~~~~~~~~~~~~~~~~~~g~a~~G~~~~~~~~~~~~~~~~~~ 63 (587) T protein:vir:99 1 MAVEPFPRRPITRPHASIE-----------------VDTSGIGGSAGSSEKVFCLIGQAEGGEPNTVYELRNYSQAKRLF 63 (587) T ss_pred CcccccCCcccccCceEEE-----------------EecCCccccCCCCCceEEEEEEecCCccceeEEeccHHHHHHHh Confidence 11221 2222333332211 1123333222222223333455777777544332 2 Q ss_pred -eccccccc----c---cCcccceeeEEEeeeeecccCCceeccceeEEEEEeeccCCCCCccceeeeeeecCCCCCeee Q lcl|Aclame:pro 215 -KGFYLEGI----D---LNSFNKQFVVSIENITVNREKGQVLYPSFDVVVHFRDIRGVSANTEYIRFRQVNLNPESPNYI 286 (742) Q Consensus 215 -~~~~~~~~----~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (742) .|-.++.| | .|+--.=+++.+++-+ +.+..-+. ++|.+ +-+-..-..| +|.+.+.+... T Consensus 64 ~~g~l~~~~~~a~~~~~~~g~~~~~~~rv~~~~----~a~~~~~~----l~~~a-~~~G~~gN~i---~v~~~~~~~~~- 130 (587) T protein:vir:99 64 RSGELLDAIELAWGSNPNYTAGRILAMRIEDAK----PASAEIGG----LKITS-KIYGNVANNI---QVGLEKNTLSD- 130 (587) T ss_pred cCcchHHHHHHHhccccCCCceEEEEEEcCCCc----eeEEEecC----eEEEE-eeccccccce---EEEEccCCCCc- Confidence 23334444 2 2332222222332211 22333332 23332 1222223334 22222111000 Q ss_pred ecccCceEEEEcCceEEecccccCCcceEEEEeccccccccc-----cchhhhhhhhhhheecccceEEEEEEEEEeeec Q lcl|Aclame:pro 287 ERVIGNMTFEFDGERIVTGGEYPNQVPFLRVVVSQDIKQNVA-----GVEKWVPVGFEGIYSVGDFTVIVNELTNVSIPV 361 (742) Q Consensus 287 ~~~~~~~~~~~~g~~~vtG~~~~n~~p~L~~si~~~~~~~~a-----g~s~~ip~al~aI~avg~~tv~v~~itnv~~p~ 361 (742) +.-=.+.+..+++.- + +=|-+| .|+|.-...+..+ +..... .+..-.+..|..++..-++.+...+. T Consensus 131 -~~~~~~~~~~~~~~~-~---~~~~g~--v~~i~y~g~~~~a~~~v~~~~~t~-~a~~~~l~~g~~~v~~yrL~~g~~~~ 202 (587) T protein:vir:99 131 -SLRLRVIFQDDRFNE-V---YDNIGN--IFTIKYKGEEANATFSVEHDEETQ-KASRLVLKVGDQEVKSYDLTGGAYDY 202 (587) T ss_pred -ceeEEEEEeccccee-e---eeeccc--eeeEEeecccccceeeEeecCcce-eeeeeeeecCCceeEEEEecCCchHH Confidence 000000112222110 0 001111 0111100000000 000000 00000111122222222222111111 Q ss_pred cccc------------cccchhhheeeeecccccceeeeee-----ccccccc-ccccccc-eeeeccCCcceeeecccc Q lcl|Aclame:pro 362 TDSA------------IIPPMRFTRIEQITLSGGASFSVIS-----NQPYGFN-IQDSRHS-YWLSPFKDDELIIGTELV 422 (742) Q Consensus 362 tdsa------------~vp~~~~~li~~~~l~~ga~~~vl~-----~~~~~~~-i~~s~~~-~~Ls~l~d~s~~v~td~~ 422 (742) +... ..++...+.+.......-..+.+.. +...+.. ....... ..++.+........+.. T Consensus 203 ~~~~~~~i~~~~~~tAky~~~~~~~i~~~~~~~~~~~~v~~~~~~v~a~~~D~~~~~~~~~~~~~~~~~g~~~~~~~~~- 281 (587) T protein:vir:99 203 TNAIITDINQLPDFEAKLSPFGDKNLESSKLDKIENANIKDKAVYVKAVFGDLEKQTAYNGIVSFEQLNAEGEVPSNVE- 281 (587) T ss_pred HHHHHhhhccccceeEEeeccCCceeEeecccccccceeeeeeeeeehhccceeeecccceeeeeeecccccchhhhhh- Confidence 0000 0000000000000000000000000 0000000 0000000 00000000000000000 Q ss_pred cccccccceeEeecccccccccceeeeccCCcceEEEecCCccccccccccccccccchhhHHHhhccCCccEEEEcCCC Q lcl|Aclame:pro 423 LPALDVSTEFGVSSWEEALPEFSFLMPFQGGSDGYIRVDENEPDTIGRVKITPALLANYERLLPLLTEDQFDLVLTPYLT 502 (742) Q Consensus 423 a~a~d~s~~v~l~~~~~~~p~a~~av~l~gGtdg~i~vd~~~~~~ig~~~~~~~~~a~rtGL~AL~~~d~v~LL~aPg~t 502 (742) .........+..... ...........++||+||. .. ......|.+|+.. +++.++ |... T Consensus 282 ~~~~~~~~~~~~~~~-~~~~a~~~~t~LtGG~dG~-----------------~~-~sy~~al~ale~~-~~~~i~-~~t~ 340 (587) T protein:vir:99 282 VEAGEESATVTATSP-IKTIEPFELTKLKGGTNGE-----------------PP-ATWADKLDKFAHE-GGYYIV-PLSS 340 (587) T ss_pred hhhccccceeeeecc-ccceecccceeeecCCCCC-----------------cc-ccHHHHHHHHhhC-CcEEEE-ecCC Confidence 000000000000000 0000001111233333321 00 1124567887765 455554 4556 Q ss_pred chHHHHHHHHHHHhhcC---ceEEEEECCCCCChHHHHHHHHhccCCcEEEEEecceeec-cccceeEech---HHHHHH Q lcl|Aclame:pro 503 FADHAGTVNAFINRAEN---RFLYLFDIAGDDDTENLAISLAGYINSSFATTFFPWVRRL-TNKGMRTVPA---SLAAYR 575 (742) Q Consensus 503 ~s~v~aal~Al~a~a~~---R~~aI~D~p~~~~t~~~A~a~r~~~~S~~aaL~~PwVkv~-d~~~~~~vPp---SgavAG 575 (742) ++.+++.+.+||..+++ ++.+++..+.+ .+.+.+...+..+++.+.+.++++.... +.+.....|+ ++++|| T Consensus 341 d~~i~a~l~a~vk~~r~~g~~~~aVlg~~~~-~~~~~~~~~a~~~n~e~vi~v~~~~~~~~~dg~~~~~~~~~~aa~vAG 419 (587) T protein:vir:99 341 KQSVHAEVASFVKERSDAGEPMRAIVGGGFN-ESKEQLFGRQASLSNPRVSLVANSGTFVMDDGRKNHVPAYMVAVALGG 419 (587) T ss_pred CHHHHHHHHHHHHHHHhCCCcEEEEecCCCC-CCHHHHHHHhhhcCCCcEEEEeccceEecCCCceeeechHHHHHHHHH Confidence 77888999999988854 24455555444 3456677888999999999998875433 2333455665 789999 Q ss_pred HHhhhccCceeecCCceeeEee---eccccchhHHhhhcCCceEEEEc-CC---CEE-EEcceecC-CCccccceeehhh Q lcl|Aclame:pro 576 SIRTTDPETGLAPVGARRGVVT---GEPVRQVDWEDLYNNRINPIVRV-GN---DVL-LFGQKTML-NVNSALNRINVRR 646 (742) Q Consensus 576 l~ArtD~e~Gv~~SPaN~~I~~---~~~ls~sE~d~LN~~GINtI~~f-g~---G~r-lWGnRTla-s~D~~wrfInVRR 646 (742) ++|..| ++.|+.|..+.. ...+++.|++.|+++|+.++... ++ +++ +.|-.|.. .+|+.|++++++| T Consensus 420 l~Ag~~----~~~SlT~~~i~~~~v~~~~t~~e~e~li~~Gvl~l~~~~~~~~~~vriv~~ItT~t~~~~~~~~~i~viR 495 (587) T protein:vir:99 420 LASGLE----IGESITFKPLRVSSLDQIYESIDLDELNENGIISIEFVRNRTNTFFRIVDDVTTFNDKSDPVKAEMAVGE 495 (587) T ss_pred HHhcCc----hhcCccceeeecccccccCCHHHHHHHHhCCeEEEEEecCCcceEEEEeeceeeccCCCCchhhhhhhhh Confidence 999886 456888876542 23467899999999999999753 33 344 35666653 5678899999999 Q ss_pred hhHHHHHHHHHHH-HHhhcccCCHHHHHHHHHHHHHHHHHHHhCCceeeEEEEEcCCCCHHHhhCCEEEEEEEEEecCCc Q lcl|Aclame:pro 647 LLIVMRNRISQIL-SSYLFENNTSENRLRAEALVRQYLESLRLRGAVTDYEVAIDSVTTPTDIDNNTLRARVTVQPARSI 725 (742) Q Consensus 647 ~~d~Ie~sI~~a~-~~~VfEPNd~~l~~~V~~sInafL~~L~~~GAL~Gf~V~~DetNtp~dI~~GrL~i~I~vaP~~PA 725 (742) ++|+|++.+++.+ ++|+++||+...|..|+..|..||.+||++|+|.+|+.. .-.-+....++++++.++|+.|+ T Consensus 496 v~D~i~~di~~~~~~~yiGk~Nn~~~r~~i~~~i~~~L~~l~~~gaI~~~~~~----dv~v~~~~d~~~v~~~v~Pv~~m 571 (587) T protein:vir:99 496 ANDFLVSELKVQLEDQFIGTRTINTSASIIKDFIQSYLGRKKRDNEIQDFPAE----DVQVIVEGNEARISMTVYPIRSF 571 (587) T ss_pred hHHHHHHHHHHHHHhhCCccccchHHHHHHHHHHHHHHHHHHhCCcccCCCcc----ceEEEecCCEEEEEEEEEEcccc Confidence 9999999999886 689999999999999999999999999999999998641 11112334579999999999999 Q ss_pred eEEEEEEEEeeceeec Q lcl|Aclame:pro 726 EYIDITFVITPTGVEI 741 (742) Q Consensus 726 EfI~l~f~it~tG~~f 741 (742) |+|.+++++.+..+.- T Consensus 572 ekIy~tv~~~~~~~~~ 587 (587) T protein:vir:99 572 KKISVSLVYKQQTLQA 587 (587) T ss_pred eEEEEEEEEEeeeecC Confidence 9999999998777666 No 41 >protein:vir:96586 Length: 587 # NCBI annotation: ORF011 # Family: family:all:2449 # MgeID: mge:1623 # MgeName: Twort # Cross-refs: genbank:acc:YP_238553;genbank:gi:66391266;genbank:GeneID:5130368 Probab=99.95 E-value=2.9e-27 Score=166.10 Aligned_cols=524 Identities=14% Similarity=0.155 Sum_probs=249.3 Q ss_pred eceeEeecccce--eeeeeeccccceEEEEeecCccccEEEEeecCCCcceEeecccCCCcceee---------ee-ecc Q lcl|Aclame:pro 150 NAPSVTLPSNIV--PLFFYYEPYTGSITLQSSVNYSGLTLNYTVSKATTPWVYFAEYGTPTSSLT---------LY-KGF 217 (742) Q Consensus 150 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~-~~~ 217 (742) -++++ .|++-. |-.|-.. ..+.|...+..+.+-+- -|=.||-|.|..-.. +| .|- T Consensus 1 ~~~~~-~~~~~~~~Pgv~~~~-~~~~~~~~~~~~~~~~~-----------~iG~a~~g~~~~~~~~~~~~~~~~~~g~G~ 67 (587) T protein:vir:96 1 MAKDI-FPRRPIQRPHASIEV-DSSGIGGSASNSEKILC-----------LIGKAEGGEPNTVYQVRNYAQAKSVFRSGE 67 (587) T ss_pred Ceeee-eCCCcccCCceEEEE-ecCCccCCCCCCCceEE-----------EEEEecCCCCceeEEEcChHHHHHhhcCCc Confidence 22222 222211 2222211 12222222222222211 123344554433222 22 233 Q ss_pred ccccc----c---cCcccceeeEEEeeeeecccCCceeccceeEEEEEeeccCCCCCccceeeeeeecC-CCCCeeeecc Q lcl|Aclame:pro 218 YLEGI----D---LNSFNKQFVVSIENITVNREKGQVLYPSFDVVVHFRDIRGVSANTEYIRFRQVNLN-PESPNYIERV 289 (742) Q Consensus 218 ~~~~~----~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 289 (742) +++.| | -|+... |+++|. -..-+.......|+.. .-+.|. +-.-||.+-.+-. |.+++.. T Consensus 68 l~~ai~~a~~~~~~~g~~~--~~a~rv--~~~~~a~~~~~~~~~~---~~~~g~--~~n~i~v~~~~~~~~~~~~~~--- 135 (587) T protein:vir:96 68 LLDAIELAWGSNPQYTAGK--ILAMRV--EDAKASQLEKGGLRVT---SKIFGS--VSNDIQVALEKNTITDSLRLR--- 135 (587) T ss_pred HHHHHHHHhccCcCCCceE--EEEEec--CCCccceeeccccccc---ccccCC--CCceEEEEEEeccCCCccceE--- Confidence 44443 2 233322 344442 1223344444444432 111122 2223322222111 2222211 Q ss_pred cCceEEEEcCceEEecccccCCcceEEEEeccccc---cccccchhhhhhhhhhheecccceEEEEEEEEEeeecccccc Q lcl|Aclame:pro 290 IGNMTFEFDGERIVTGGEYPNQVPFLRVVVSQDIK---QNVAGVEKWVPVGFEGIYSVGDFTVIVNELTNVSIPVTDSAI 366 (742) Q Consensus 290 ~~~~~~~~~g~~~vtG~~~~n~~p~L~~si~~~~~---~~~ag~s~~ip~al~aI~avg~~tv~v~~itnv~~p~tdsa~ 366 (742) ..++.++..- ..-|++|.+.+.-..+.+ -...+..... .+..-.+..|..++..-++.+...+.+.. . T Consensus 136 ---~~~~~~~~~~----~~~n~G~v~~i~y~g~~~~a~~~~~~~~~~~-~A~~l~l~gg~~~v~~yrl~~g~~~~~~~-~ 206 (587) T protein:vir:96 136 ---VVFQKDNYQE----VFDNLGNIFSINYKGEGEKATFSVEKDKETQ-EAKRLVLKVDEKEVKAYELNGGAYSFTNE-I 206 (587) T ss_pred ---EEEecCCcee----eccccCceEEEEecccccceeEeeccCcccc-eeeeeEEEecCceEEEEEeCCCchhhhhh-h Confidence 1244444321 133556533222111100 0001111000 11111112233333333221111111000 0 Q ss_pred ccchhhhee----eeecccccceeeeee-cccccccccccccceeeecc-CCcce-------eeeccccccc-cccccee Q lcl|Aclame:pro 367 IPPMRFTRI----EQITLSGGASFSVIS-NQPYGFNIQDSRHSYWLSPF-KDDEL-------IIGTELVLPA-LDVSTEF 432 (742) Q Consensus 367 vp~~~~~li----~~~~l~~ga~~~vl~-~~~~~~~i~~s~~~~~Ls~l-~d~s~-------~v~td~~a~a-~d~s~~v 432 (742) . ...+.+ -++.-..+..+.+.. +........ . ........ .+... .......... ......+ T Consensus 207 ~--~~~~~~~~~tAky~g~~~n~~~v~v~d~~~~~~~k-~-~~~y~~t~~~di~~~~~~~~~~~~~~~~~~~~~~~~~~v 282 (587) T protein:vir:96 207 I--TDINELPDFEAKLSPFGDKNLESRKLDEATDVDIK-G-KAVYVKAVFGDIENQTQYNQYVKFEQLPEQASEPSDVEV 282 (587) T ss_pred h--hhhccccceEEEeecccCceeEEEeeccccccccc-e-EEEeehhhhhhhhhhhccccceeeccccchhhhhhcccc Confidence 0 000000 011111111111100 000000000 0 00000000 00000 0000000000 0000000 Q ss_pred E---------eecccccccccceeeeccCCcceEEEecCCccccccccccccccccchhhHHHhhccCCccEEEEcCCCc Q lcl|Aclame:pro 433 G---------VSSWEEALPEFSFLMPFQGGSDGYIRVDENEPDTIGRVKITPALLANYERLLPLLTEDQFDLVLTPYLTF 503 (742) Q Consensus 433 ~---------l~~~~~~~p~a~~av~l~gGtdg~i~vd~~~~~~ig~~~~~~~~~a~rtGL~AL~~~d~v~LL~aPg~t~ 503 (742) . ...+...+. ......++||+||.. + ......+.+|+.. +++.++ +...+ T Consensus 283 ~~~~~~~~~~~~~~~~~~~-~~~~~aLtGG~dG~~----------------~--~~y~~~l~ale~~-~~~~i~-~~t~d 341 (587) T protein:vir:96 283 HAETESATVTATSKPKAIE-PFELTKLSGGTNGEP----------------P--TSWSAKLEKFKNE-GGYYIV-PLTDR 341 (587) T ss_pred cccccceeeeecccccccc-cccceeeecCCCCCC----------------c--ccHHHHHHHHhhC-CcEEEE-ecCCC Confidence 0 000000000 000112333333310 0 0123456777655 456654 44567 Q ss_pred hHHHHHHHHHHHhhcC---ceEEEEECCCCCChHHHHHHHHhccCCcEEEEEecceeecccc-ceeEec---hHHHHHHH Q lcl|Aclame:pro 504 ADHAGTVNAFINRAEN---RFLYLFDIAGDDDTENLAISLAGYINSSFATTFFPWVRRLTNK-GMRTVP---ASLAAYRS 576 (742) Q Consensus 504 s~v~aal~Al~a~a~~---R~~aI~D~p~~~~t~~~A~a~r~~~~S~~aaL~~PwVkv~d~~-~~~~vP---pSgavAGl 576 (742) +.++..+.+||..+++ ++.+++..+.+ ++.+.+...++.+++.+.++++++..+.+.. .....| .++++||+ T Consensus 342 ~ai~~~l~a~vk~~r~~gk~~~aVlg~~~~-~~~~~~~~~a~~~n~e~vi~v~~~~~~~~~~~~~~~~~~~~~aa~vAG~ 420 (587) T protein:vir:96 342 QSVHSEVATFVKNRSDAGEPMRAIVGGGTS-ETKEKLFGRQAILNNPRVALVANSGKFVMGNGRILQAPAYMVASAVAGL 420 (587) T ss_pred HHHHHHHHHHHHHHHhCCCeEEEEecCCCC-CCHHHHHHHHhhcCCCcEEEEecceEEecCCCceeeechhhHHHHHHHH Confidence 7888999999988854 24455555444 3455677888999999999999887665543 233333 37889999 Q ss_pred HhhhccCceeecCCceeeEeee---ccccchhHHhhhcCCceEEEEc-CCCEEEEcc-eec----CCCccccceeehhhh Q lcl|Aclame:pro 577 IRTTDPETGLAPVGARRGVVTG---EPVRQVDWEDLYNNRINPIVRV-GNDVLLFGQ-KTM----LNVNSALNRINVRRL 647 (742) Q Consensus 577 ~ArtD~e~Gv~~SPaN~~I~~~---~~ls~sE~d~LN~~GINtI~~f-g~G~rlWGn-RTl----as~D~~wrfInVRR~ 647 (742) +|..+ +++|+.|..+.+. ..+++.|++.|+++|+.+++.. +++.++|.. +++ ...++.|++|+++|+ T Consensus 421 ~Ag~~----~~~S~T~~~~~~~~v~~~~t~~e~~~~i~~G~~~l~~~~~~~~~v~~~vnsitT~t~~~~~~~~~i~virv 496 (587) T protein:vir:96 421 VSGLD----IGESITFKPLFVNSLDKVYESEELDELNENGIITIEFVRNRMTTMFRIVDDVTTFPDKNDPVKSEMALGEA 496 (587) T ss_pred HhcCc----cccCccceeeecccccccCCHHHHHHHHhCCeEEEEEecCCcEEEEEeeccceecCCCCCchhhhhhhHHH Confidence 99876 5678888766432 3467899999999999999875 455666643 443 245678999999999 Q ss_pred hHHHHHHHHHHH-HHhhcccCCHHHHHHHHHHHHHHHHHHHhCCceeeEEEEEcCCCCHHHhhCCEEEEEEEEEecCCce Q lcl|Aclame:pro 648 LIVMRNRISQIL-SSYLFENNTSENRLRAEALVRQYLESLRLRGAVTDYEVAIDSVTTPTDIDNNTLRARVTVQPARSIE 726 (742) Q Consensus 648 ~d~Ie~sI~~a~-~~~VfEPNd~~l~~~V~~sInafL~~L~~~GAL~Gf~V~~DetNtp~dI~~GrL~i~I~vaP~~PAE 726 (742) +|+|++.+++.+ ++|++|||+...|..++..|..||.+|+++|+|.+|+.. +-.-++.+.++++++.++|+.|+| T Consensus 497 ~D~i~~di~~~~~~~yiGk~nn~~~r~~v~~~i~~~L~~l~~~g~I~~~~~~----dv~v~~~~D~~~v~~~v~Pv~~me 572 (587) T protein:vir:96 497 NDFLVSELKILLEEQYIGTRTINTSASQIKDFVQSYLGRKKRDNEIQDFPPE----DVQVIIEGNEARISLTIFPIRALK 572 (587) T ss_pred HHHHHHHHHHHHHhcCCccccCHHHHHHHHHHHHHHHHHHHhCCcccCCCcc----ceEEEecCCEEEEEEEEEEcccce Confidence 999999999987 589999999999999999999999999999999997541 111123445799999999999999 Q ss_pred EEEEEEEEeeceeec Q lcl|Aclame:pro 727 YIDITFVITPTGVEI 741 (742) Q Consensus 727 fI~l~f~it~tG~~f 741 (742) +|.+++++.+..++- T Consensus 573 kIy~tv~~~~~~~~~ 587 (587) T protein:vir:96 573 KISVSLVYRQQTLQA 587 (587) T ss_pred EEEEEEEEEeeeecC Confidence 999999998888777 No 42 >protein:vir:103168 Length: 641 # NCBI annotation: gp122 # Family: family:all:661 # MgeID: mge:1583 # MgeName: Syn9 # Cross-refs: genbank:acc:YP_717789;genbank:gi:113200626;genbank:GeneID:4239177 Probab=99.94 E-value=3.3e-27 Score=165.74 Aligned_cols=556 Identities=15% Similarity=0.123 Sum_probs=197.1 Q ss_pred Ce---eeeeeeeeeEeccccCCch-hhheeeeecCCCCcccceeec-hhHHhh-ccc-cee-----eeehhhhcCcceEE Q lcl|Aclame:pro 1 MY---RVNVKEVDLSITPEVGTPV-QTALVGAFDLPIPSELPVSVT-PDEFRR-VGS-TEL-----SLIADSLVGGQEVT 68 (742) Q Consensus 1 ~~---~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~-~~~-----~~~~~~~~~~~~~~ 68 (742) -| -|-|+|+|++ .+-.|-+- ..++||-|.-= |-..|+.|+ ..||+| .|. .+- +..+.-+-||.+.- T Consensus 5 ~~~sPGVyv~E~~~~-~~i~~v~tsvaafvG~~~~G-P~~~p~~v~s~~d~~~~FG~~~~~~~l~~av~~fF~ngG~~~~ 82 (641) T protein:vir:10 5 NQLSPGVVIQERDLT-AVTTPIGLNVGVLAAPFTKG-PVEEIFEVSTERDLASVFGEPNDYNYEYWFTASQFLSYGGVLK 82 (641) T ss_pred cccCCceEEEEecCC-CcccccCCccceEEecccCC-CCCccEEecCHHHHHHHcCCcCCCcchHHHHHHHHHhcCCEEE Confidence 12 3778999986 34333222 34677777643 446677776 456655 453 222 22344577999999 Q ss_pred EEccCCcccccceeEEEEecceeeehhhheeeeeeeecccC-----------C-CcccceeEEEEEcc-CCCeeEEEeee Q lcl|Aclame:pro 69 VIRPRGETQSLNAAFVVVGGYNVTLGAFNVFYLMFLGYDPQ-----------K-GYTDVSYVDVQLAG-TPTDTILFSYS 135 (742) Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~-~~~~~~~~~~~~~~-~~~~~~~~~~~ 135 (742) |+|--++.. .|+.-. +-...+..-..+ ...++.. + ..++ -+.|+|.. +...+.-|. T Consensus 83 vvRv~~~~~-~~a~~~---~~~~~~~~~~~~---~~~~~~~~~~~~~~~A~~pG~~gn--~l~v~i~~~~~~~~~~~~-- 151 (641) T protein:vir:10 83 AIRLNAASL-KNSVDS---GTAPLIKNLQEY---ETTYESSNSNTFKFASRDAGALGN--SVGIFITDAGPDQIAVLP-- 151 (641) T ss_pred EEEecCccc-cccccc---cchhhccccccc---cccccCcCccccEEEeccCCCcCC--ceEEEEEcCCCcceeeee-- Confidence 999876552 222110 111111100000 0111111 1 1111 12233322 111111111 Q ss_pred cCCCcceeEEEEEeeceeEeecccce--eeeeeeccccceEEEEeecCccccEEEEeecCCCcceEeecc-cCCCcceee Q lcl|Aclame:pro 136 LDGSSTTHSLTINLNAPSVTLPSNIV--PLFFYYEPYTGSITLQSSVNYSGLTLNYTVSKATTPWVYFAE-YGTPTSSLT 212 (742) Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 212 (742) .+|.+..+.+..+- .++..+.-. ...+.+....+++.-.-+ --..-++++. +.-.+....+- -+.-+..+. T Consensus 152 ~~~~~~~~~~~~~~---~~~~~~~~~~~v~~~~~~~~~~~~~~~~~-~~~~~~i~~a--~~~~~~~~~~~~a~~~~~~i~ 225 (641) T protein:vir:10 152 APGTGNEWEFVADE---AVTAASGASAKVYRYSIRLTLTNVVGTFV-PGGATTISIS--GSDESVDVLAWDAGNKYLEIA 225 (641) T ss_pred cccccccceeccce---eeeeccCcccccccccccccccceeeecc-cCCcceeEec--ccccccccccccCCcceeeee Confidence 22333333332211 011111111 111222222222211111 0011112211 00000000000 000000000 Q ss_pred eeecccccccccCcccceeeEEEeeeeecccCCceeccceeEEEEEeeccCCCCCccceeeeeeecCCCCCeeeecccCc Q lcl|Aclame:pro 213 LYKGFYLEGIDLNSFNKQFVVSIENITVNREKGQVLYPSFDVVVHFRDIRGVSANTEYIRFRQVNLNPESPNYIERVIGN 292 (742) Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (742) +-.| . ...+........+|....- ....+++-. . ..-.+-..+. +-.- T Consensus 226 ~~~~-----------g---~~g~~~~~~~~t~gt~~~t------------~a~~g~~~~-~-~~~~~~~~ia----~aat 273 (641) T protein:vir:10 226 LPAG-----------G---VTGIFADAQVVTQGTNTAA------------IASSGIERR-L-YIGKDSGSIN----FAAT 273 (641) T ss_pred ecCC-----------c---ceeeeeeeeeccCCcccee------------eecccchhh-h-hhccccccce----eeee Confidence 0000 0 0001111111111111100 000111100 0 0000000000 0000 Q ss_pred eEEEEcCceEEecccccCCcceEEEEeccccccccccchhh---hhhhhhhhe--ecc----cceEEEEEEEEEeeeccc Q lcl|Aclame:pro 293 MTFEFDGERIVTGGEYPNQVPFLRVVVSQDIKQNVAGVEKW---VPVGFEGIY--SVG----DFTVIVNELTNVSIPVTD 363 (742) Q Consensus 293 ~~~~~~g~~~vtG~~~~n~~p~L~~si~~~~~~~~ag~s~~---ip~al~aI~--avg----~~tv~v~~itnv~~p~td 363 (742) ...+..+...++.++...+. +......+ ..+ .|......+ +.+ ...+.+.+.. ..+.-+. T Consensus 274 ~ag~~g~~~~v~~~~v~d~~---------~a~~~~~g-~~~~~va~~~gts~~a~~~g~~~D~~~~lv~d~~-~~~~g~~ 342 (641) T protein:vir:10 274 DAVVDTNATSATISSVRNEY---------AEREYLPG-SKWVNVAARPGTSLYANSVGGVNDELHVLVIDVD-GKITGNP 342 (641) T ss_pred cccccccceeeEeeeeeeee---------cccccccc-cccccccccchhhhhhhhcCCcccceEEEEEeec-ceeeccc Confidence 00000001111111100000 00000000 000 000000000 001 1111111000 0000000 Q ss_pred cccccchhhheeeeecccccceeeeeecccccccccccccceeeeccCCcceeeeccccc-------ccccccceeEeec Q lcl|Aclame:pro 364 SAIIPPMRFTRIEQITLSGGASFSVISNQPYGFNIQDSRHSYWLSPFKDDELIIGTELVL-------PALDVSTEFGVSS 436 (742) Q Consensus 364 sa~vp~~~~~li~~~~l~~ga~~~vl~~~~~~~~i~~s~~~~~Ls~l~d~s~~v~td~~a-------~a~d~s~~v~l~~ 436 (742) +..+ + ......+.....+...............+...++ .....+...+..... ............. T Consensus 343 g~v~-e---~~~~~s~~~~~~~~~~~~~~~~~~~~~~s~~v~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 416 (641) T protein:vir:10 343 GSVL-E---RFIGVSKASDAKTSIGEVNYYKEVIKQQSAYVYW--GSHETAPFLGTAANAAAGDWGASALNRRYNLLRST 416 (641) T ss_pred ccee-e---eeecccccCCcccccccceeeeeeeccccceEEE--ecccccccccccccccccccccccccccccccccc Confidence 0000 0 0000000000000000000000000000000000 000000000000000 0000000000000 Q ss_pred -c-----c-----ccccccceeeeccCCcceEEEecCCccccccccccccccccchhhHHHhhccCC--ccEEEEcCCC- Q lcl|Aclame:pro 437 -W-----E-----EALPEFSFLMPFQGGSDGYIRVDENEPDTIGRVKITPALLANYERLLPLLTEDQ--FDLVLTPYLT- 502 (742) Q Consensus 437 -~-----~-----~~~p~a~~av~l~gGtdg~i~vd~~~~~~ig~~~~~~~~~a~rtGL~AL~~~d~--v~LL~aPg~t- 502 (742) . . ...........+++|.|+.. +..... .+....++|+++|++.+. ++++++|+.. T Consensus 417 ~~~~~~~~~~~~~~~~~~~~~~~~l~gG~d~~~------~~~~~~----~~~~~~~tg~~~~~~~e~~~i~~l~~~~~~~ 486 (641) T protein:vir:10 417 AGTTSFPAGAVTVGSKNNATHYYRLANGADYSA------SGALYN----LSNVDIATAYELIEDPESQVIDYVLSGPAGA 486 (641) T ss_pred cccccccccccccCCCCcceeEEEeecCccccc------cccccc----ccchhHHHHHHHhhhhhhhccceeeecCCCC Confidence 0 0 00000112233444443311 011111 112235789999988765 4567666542 Q ss_pred ----chHHHHHHHHHHHhhcCceEEEEECCCCC--------ChHHHHHHHHh-ccCCcEEEEEecceeeccc--cceeEe Q lcl|Aclame:pro 503 ----FADHAGTVNAFINRAENRFLYLFDIAGDD--------DTENLAISLAG-YINSSFATTFFPWVRRLTN--KGMRTV 567 (742) Q Consensus 503 ----~s~v~aal~Al~a~a~~R~~aI~D~p~~~--------~t~~~A~a~r~-~~~S~~aaL~~PwVkv~d~--~~~~~v 567 (742) ...++..+..||+.+++| ++++|+|.+. ...+.+..|+. +++|+|+++||||+++.|+ +..+++ T Consensus 487 ~~~~~~~v~~~~i~~ce~~~d~-~ailD~p~~~~~~~~~~~~~~~~~~~~~~~~~~s~yaa~y~P~~~v~dp~~~~~~~v 565 (641) T protein:vir:10 487 DEAAAIAKATTITTIVESRKDC-MAFLSPLRSDVIGVSNTTTVTENLVNYFNQLPSSNYVVFDSGYKYIYDKYNDVYRYV 565 (641) T ss_pred CcchhHHHHHHHHHHHHhcCCE-EEEEcCCcccccCCCchhhHHHHHHHHHhhcCCCceEEEEeceeEeecccCCceeEe Confidence 244666778888876655 4566776532 12345566765 5689999999999999874 567899 Q ss_pred chHHHHHHHHhhhccCceeecCCcee---eEeee----ccccchhHHhhhcCCceEEEEc-CCCEEEEcceecCCCcccc Q lcl|Aclame:pro 568 PASLAAYRSIRTTDPETGLAPVGARR---GVVTG----EPVRQVDWEDLYNNRINPIVRV-GNDVLLFGQKTMLNVNSAL 639 (742) Q Consensus 568 PpSgavAGl~ArtD~e~Gv~~SPaN~---~I~~~----~~ls~sE~d~LN~~GINtI~~f-g~G~rlWGnRTlas~D~~w 639 (742) ||||++||+|||+|.++|+||||+|. .+.+. ..+++.|++.||++||||||.| ++|++- |.-+- ..+. T Consensus 566 PpsG~iAGv~ArtD~~rGvwkAPAn~~~~~i~gv~~l~~~~~~~e~~~Lnp~gIN~ir~fpg~G~v~--~~~~~--~~~~ 641 (641) T protein:vir:10 566 PCNGDIAGLILETGLEEEPWFSPAGFQRGVLRNAVKLAYSPNKTQRDRLYANRINPVVSFPGHAMIN--NNIAF--HTKL 641 (641) T ss_pred cCCHHHHHHHHhhhccCCceECcCCcccceeeeeeeeeEecChhHHhhhhhcccceEEecCCceeec--ceeee--eecC Confidence 99999999999999999999999996 34333 4578999999999999999999 567651 21110 0001 No 43 >protein:vir:100829 Length: 607 # NCBI annotation: hypothetical protein # Family: family:all:2449 # MgeID: mge:1633 # MgeName: LP65 # Cross-refs: genbank:acc:YP_164738;genbank:gi:56693151;genbank:GeneID:3197462 Probab=99.93 E-value=6.7e-26 Score=158.60 Aligned_cols=510 Identities=14% Similarity=0.087 Sum_probs=246.2 Q ss_pred ccceEEEEeecCccccEEEEeecCCCcceEeecccCCCcceeeeeecccccccccCcccceeeEEEeeeeecccCCceec Q lcl|Aclame:pro 170 YTGSITLQSSVNYSGLTLNYTVSKATTPWVYFAEYGTPTSSLTLYKGFYLEGIDLNSFNKQFVVSIENITVNREKGQVLY 249 (742) Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (742) -|-.|+-.++ .|=-|--.|-+.|-||.-+- +|.+.--.| +++.--.++. -..-|....+|++ T Consensus 1 ~~~~~~~~~~-----~~~~~~~~~~~~pgv~~~~~---~~~~~~~~~--------~~~~~~~~iG--~a~~G~~~~~~~~ 62 (607) T protein:vir:10 1 MTTTITSAES-----YKRIYPLFYDSRPHVETNFD---DSRLSNTAS--------DSAKNIFMLG--SATNGDPTKVYEI 62 (607) T ss_pred Ccceecchhh-----HHHHhCCCCccCCceEEEEe---cCcCcCCCC--------CCcceEEEEE--EeCCCCCceEEEE Confidence 1222221111 11123333344555554332 222222222 4433222221 1122222233333 Q ss_pred cceeEEEEEeeccCCCCCccceeeeeeec-------CCCCCeeeecccC--ceEEEEcCceEEecccccCCcceEEEEec Q lcl|Aclame:pro 250 PSFDVVVHFRDIRGVSANTEYIRFRQVNL-------NPESPNYIERVIG--NMTFEFDGERIVTGGEYPNQVPFLRVVVS 320 (742) Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~--~~~~~~~g~~~vtG~~~~n~~p~L~~si~ 320 (742) -++. .+|++-+ +-|..+..++-+ |-.++-|..+|=. ..+.+.+|... |++.+-.++.-+++++. T Consensus 63 ~~~~---~a~~~f~---~g~l~~a~~~a~~~~~~~~~g~~~~~~~rv~~~~~a~~~~~~~~~-~~~~~~~~~~~i~~~l~ 135 (607) T protein:vir:10 63 RTSQ---QATKIFG---SGDLVDGIKLAFDPTGNSVTNGGTVYALRVDNAKQASLVKDGLTF-TSSIFGTNANQVSVALD 135 (607) T ss_pred cchh---HHHHhhc---CcchHHHHHHhhccccCCccCCceEEEEeCCCccccceecccccc-cccccccCCCceEEEEE Confidence 3322 2222211 111111113333 3344445555411 12344555543 55555555555777764 Q ss_pred cccccccccchhhhhhhhhhheeccc--------ceEEEEEEEEEeeecccccccc--c--hhhh--eeeeeccccccee Q lcl|Aclame:pro 321 QDIKQNVAGVEKWVPVGFEGIYSVGD--------FTVIVNELTNVSIPVTDSAIIP--P--MRFT--RIEQITLSGGASF 386 (742) Q Consensus 321 ~~~~~~~ag~s~~ip~al~aI~avg~--------~tv~v~~itnv~~p~tdsa~vp--~--~~~~--li~~~~l~~ga~~ 386 (742) ++....-.-...+.+.-..-+|++.. ++.....++.+.++........ . .... ....+.+..+... T Consensus 136 ~~~~~~~~~~~~~~~d~~~~~~~n~g~~~~i~y~g~~~~a~~~v~~~~~g~~~~lt~~~~~~~~~~~~V~~~~l~~~~~~ 215 (607) T protein:vir:10 136 NDVFGVPRITVNYSPDNYERTYTNIGQMFSITYSGKSASAGYTVSHDTDGKAILLTLGSGDSIDKLTNVATFDLTMSKYD 215 (607) T ss_pred ecCCCccceeEEeecccceeeeeeccceeecccCcccccccceeeecCCCceeEEEecCCCccceeeeeecccccccccc Confidence 32210000000011111112222110 0000000111111111000000 0 0000 0001111111100 Q ss_pred ee--ee---ccccccccc------------cccc--------ceee-eccCCcceeeecccccccccccceeEee--ccc Q lcl|Aclame:pro 387 SV--IS---NQPYGFNIQ------------DSRH--------SYWL-SPFKDDELIIGTELVLPALDVSTEFGVS--SWE 438 (742) Q Consensus 387 ~v--l~---~~~~~~~i~------------~s~~--------~~~L-s~l~d~s~~v~td~~a~a~d~s~~v~l~--~~~ 438 (742) .+ +. +...++... +... ...+ ....|..... .....+... ... T Consensus 216 t~~~l~~din~~~~~~A~~~g~~~i~tky~d~~~~~i~V~~~~~iv~a~~~D~~~~~---------~~~~~~~~t~~~~~ 286 (607) T protein:vir:10 216 TIAKLMQAISATPNFSASVVGSPSVNTSYLDEVTSPVDVKTAPAVVTAKIGDAISKL---------GYDPYVVVTQTSNN 286 (607) T ss_pred hHHHHHHHhhcCCceEEEEecccceeeeccccccceeEEEEeeeeechhhhhhhhcc---------cccceEEeeecccc Confidence 00 00 000000000 0000 0000 0000000000 000000000 000 Q ss_pred c----------------------cccccceeeeccCCcceEEEecCCccccccccccccccccchhhHHHhhccCCccEE Q lcl|Aclame:pro 439 E----------------------ALPEFSFLMPFQGGSDGYIRVDENEPDTIGRVKITPALLANYERLLPLLTEDQFDLV 496 (742) Q Consensus 439 ~----------------------~~p~a~~av~l~gGtdg~i~vd~~~~~~ig~~~~~~~~~a~rtGL~AL~~~d~v~LL 496 (742) . ..+.......++||+|| ... ......+.+|+..+ ..++ T Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~~a~~~LtGGtdG-----------------~~~-~ty~dal~aLe~~e-~~~i 347 (607) T protein:vir:10 287 KPIVNGVSAGTGSATASVTTAPESFPANFDTAFLTGGSTG-----------------DVP-VSWADKFNGAIGNN-VYYI 347 (607) T ss_pred hhhhhhhhccccceeeeeeccccccccccceeeeeCCCCC-----------------Cch-hhHHHHHHHHhhcC-ceEE Confidence 0 00000001111222111 000 01123466666553 5555 Q ss_pred EEcCCCchHHHHHHHHHHHhhcC---ceEEEEECCCCCChHHHHHHHHhccCCcEEEEEecceeeccccceeEech---H Q lcl|Aclame:pro 497 LTPYLTFADHAGTVNAFINRAEN---RFLYLFDIAGDDDTENLAISLAGYINSSFATTFFPWVRRLTNKGMRTVPA---S 570 (742) Q Consensus 497 ~aPg~t~s~v~aal~Al~a~a~~---R~~aI~D~p~~~~t~~~A~a~r~~~~S~~aaL~~PwVkv~d~~~~~~vPp---S 570 (742) ++ ...+..++..+.+||..+++ ++.+++..+.+ ++.+.+.++++.+++.+.+.++|+.+..+.+.....|+ + T Consensus 348 ~~-~t~d~ai~~~l~a~vkr~~~~g~~~~aVlg~~~~-~t~~~~~t~a~~~N~ervv~V~~~~~~~~~G~~~~~~~~~~A 425 (607) T protein:vir:10 348 IP-LTSEENIHAELQAFIDEQHVLGYNYHAFVGGGFA-EPLEQILSRQVNINDSRFGLVGQSGHVQEGGESVHVPAYLMA 425 (607) T ss_pred Ee-cCCCHHHHHHHHHHHHHHHhCCCcEEEEecCCCC-CCHHHHHHHHHhhCCCcEEEEecCeeEeeCCcceeccHHHHH Confidence 44 44677888999999988754 34555555444 35667788899999999999999987766555555554 7 Q ss_pred HHHHHHHhhhccCceeecCCceeeEee---eccccchhHHhhhcCCceEEEEc-----CCCEEEEcce-ec-CCCccccc Q lcl|Aclame:pro 571 LAAYRSIRTTDPETGLAPVGARRGVVT---GEPVRQVDWEDLYNNRINPIVRV-----GNDVLLFGQK-TM-LNVNSALN 640 (742) Q Consensus 571 gavAGl~ArtD~e~Gv~~SPaN~~I~~---~~~ls~sE~d~LN~~GINtI~~f-----g~G~rlWGnR-Tl-as~D~~wr 640 (742) +++||++|..+ +..|+.|..+.. ...+++.|++.|+++|+.++... +++++++.+- |. ..+++.|+ T Consensus 426 a~vAGl~Ag~~----~~~SlT~k~i~~~~v~~~lt~~e~e~ai~~Gv~~l~~~~~~~~~~~vrIv~~ItT~t~~~~~~~~ 501 (607) T protein:vir:10 426 AYVGGLSSSLG----VAVPITNKKLALVDLDQNFSGDDLNTLNQNGVIGIEHLVNRNATGGYYIVQDVSTNTVSSSHVDG 501 (607) T ss_pred HHHHHHHhcCc----cccCcccceeccccccccCCHHHHHHHHhCCeEEEEEccCccccceEEEeeeeeeccCCCCcchh Confidence 88999999886 456777765532 23578899999999999998643 2357775554 33 24578899 Q ss_pred eeehhhhhHHHHHHHHHHHH-HhhcccCCHHHHHHHHHHHHHHHHHHHh--CCceeeEEEEEcCCCCHHHhhCCEEEEEE Q lcl|Aclame:pro 641 RINVRRLLIVMRNRISQILS-SYLFENNTSENRLRAEALVRQYLESLRL--RGAVTDYEVAIDSVTTPTDIDNNTLRARV 717 (742) Q Consensus 641 fInVRR~~d~Ie~sI~~a~~-~~VfEPNd~~l~~~V~~sInafL~~L~~--~GAL~Gf~V~~DetNtp~dI~~GrL~i~I 717 (742) +++++|++|+|.+.+++.+. +|++++|+...|.+++..+..+|..+|. .|+|.+|.. ++-.-...+.++++++ T Consensus 502 ~i~viRv~D~i~~dir~~~~~~yIGk~nnd~~~~~vk~~i~~~L~~~~l~~~gaI~df~~----edv~v~~~~D~v~v~~ 577 (607) T protein:vir:10 502 SLYLGELTDFLFDNLRFVLRDTYIGSNIRSTSADDIKSTVASYLYSEMNNDDGLIVDFSE----SDIVVTISGTVVYIQF 577 (607) T ss_pred eeehhhhHHHHHHHHHHHHhhcCCcccCCcchHHHHHHHHHHHHHHHHHHhcCceeCCCc----cccEEeeCCCEEEEEE Confidence 99999999999999998864 7999999999999999999999976554 689998742 1111123456899999 Q ss_pred EEEecCCceEEEEEEEEeeceeecC Q lcl|Aclame:pro 718 TVQPARSIEYIDITFVITPTGVEIT 742 (742) Q Consensus 718 ~vaP~~PAEfI~l~f~it~tG~~fs 742 (742) .++|+.++|+|.+++++.+..++-- T Consensus 578 ~v~Pv~~iekIyvtv~v~~~~~~~~ 602 (607) T protein:vir:10 578 AVAPTQEIKNIVVSGTYSNYSATSE 602 (607) T ss_pred EEEEcccceEEEEEEEEEEEEEeec Confidence 9999999999999999988887766 No 44 >protein:vir:102957 Length: 437 # NCBI annotation: sheath tail protein # Family: family:all:632 # MgeID: mge:1461 # MgeName: EJ-1 # Cross-refs: genbank:acc:NP_945292;genbank:gi:39653727;uniprot:Q708M0;genbank:GeneID:2672871 Probab=99.91 E-value=4.1e-25 Score=154.26 Aligned_cols=412 Identities=15% Similarity=0.087 Sum_probs=212.1 Q ss_pred ccCCCCCcc-------ceeeeeeecCCCCCeeeecccCce-EEEEcCceEEecccccCCcceEEEEeccccccccccchh Q lcl|Aclame:pro 261 IRGVSANTE-------YIRFRQVNLNPESPNYIERVIGNM-TFEFDGERIVTGGEYPNQVPFLRVVVSQDIKQNVAGVEK 332 (742) Q Consensus 261 ~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~vtG~~~~n~~p~L~~si~~~~~~~~ag~s~ 332 (742) +-|-.-+++ ||+| .|.-++.++.+.-++ .|-....+ | |+|. |.+..+..+-...+|..... T Consensus 1 m~gg~~~~~~k~~PGvYi~~-----~~~~~~~i~~~~~~~~a~~~~~~~---G--p~~~-~~~i~s~~d~~~~fG~~~~~ 69 (437) T protein:vir:10 1 MAGGIWKRQNKVRPGAYINV-----KSKDIAMTRLGGDGVVTVPLALSF---G--QSKK-LMKIRRGEDLFKKLGYEQES 69 (437) T ss_pred CCcceecccceecCceeEEE-----ecCCcceeeccCCcEEEEEEEecC---C--CCce-eEEEecHHHHHHHcCCccch Confidence 111111111 2211 122222233332221 11111111 2 2322 44555665555556643221 Q ss_pred hhhhhhhhheecccceEEEEEEEEEeeeccccccccchhhheeeeecccccceeeeeecccccccccccccceeeeccCC Q lcl|Aclame:pro 333 WVPVGFEGIYSVGDFTVIVNELTNVSIPVTDSAIIPPMRFTRIEQITLSGGASFSVISNQPYGFNIQDSRHSYWLSPFKD 412 (742) Q Consensus 333 ~ip~al~aI~avg~~tv~v~~itnv~~p~tdsa~vp~~~~~li~~~~l~~ga~~~vl~~~~~~~~i~~s~~~~~Ls~l~d 412 (742) ..-..+...+ .|+.++.+.++.. ...++. +.. ....+.-+++-..|..+.+....... + .....+..... T Consensus 70 ~~~~~~~~~~-~g~~~~~~~R~~~-g~~a~~--tl~-~~~~~~A~~~G~~gn~i~v~v~~~~~----d-~~~~~v~~~~~ 139 (437) T protein:vir:10 70 PQLLLLNEAF-KRVSEVLLYRLNT-GEKANV--SLS-DNVTAQAKYSGVRGNDITVTVKTNVD----D-PSSFDVVTFLD 139 (437) T ss_pred hHHHHHHHHh-cCCCEEEEEECCC-CceeeE--eec-cceEEEeccCCcccceeEEEEeeccC----C-ccceEEEEecC Confidence 1101122222 4667777665432 111110 000 00001111112222222222111100 0 00000000000 Q ss_pred cceeeecccc-cccccccceeEeecccccccccceeeeccCCcceEEEecCCccccccccccccccccc-hhhHHHhhcc Q lcl|Aclame:pro 413 DELIIGTELV-LPALDVSTEFGVSSWEEALPEFSFLMPFQGGSDGYIRVDENEPDTIGRVKITPALLAN-YERLLPLLTE 490 (742) Q Consensus 413 ~s~~v~td~~-a~a~d~s~~v~l~~~~~~~p~a~~av~l~gGtdg~i~vd~~~~~~ig~~~~~~~~~a~-rtGL~AL~~~ 490 (742) .......... .........+.+. +...+ .......++||+++.. ...+ ..+|.+|+. T Consensus 140 ~~~~d~~~v~~~~~~~~n~~v~~~-~~~~l-~~~a~~~LtGG~dg~~------------------t~~dy~~al~~le~- 198 (437) T protein:vir:10 140 TVVMDLQTVKVLADLKNNALVEFS-GTGEL-QPVAGAKLTGGTDGAI------------------STQDYLEYFKALET- 198 (437) T ss_pred cceeeeeehhhhhhhhhhcccccc-ccccc-ccccceeeeccccCCC------------------ChhHHHHHHHHhcc- Confidence 0000000000 0000111111111 11111 1122234555554411 0112 245666654 Q ss_pred CCccEEEEcCCCchHHHHHHHHHHHhhcC----ceEEEEECCCCCChHHHHHHHHhccCCcEEEEEecceeeccccceeE Q lcl|Aclame:pro 491 DQFDLVLTPYLTFADHAGTVNAFINRAEN----RFLYLFDIAGDDDTENLAISLAGYINSSFATTFFPWVRRLTNKGMRT 566 (742) Q Consensus 491 d~v~LL~aPg~t~s~v~aal~Al~a~a~~----R~~aI~D~p~~~~t~~~A~a~r~~~~S~~aaL~~PwVkv~d~~~~~~ 566 (742) .+++.+++|+. ++..+..+.++|..++. ++.+++.... . +....+-+.+-....+....-- T Consensus 199 ~~~n~l~~~~~-d~~~~t~~~~~ik~~r~~~g~~~~~V~~~~~-~-------------d~e~Iin~~n~~~~~~~~~~~~ 263 (437) T protein:vir:10 199 VEFNYMALPVE-DASIKKAAINFIKRMREDEGLGAQLVVADSD-A-------------DSEAVINVKNGVILSDKTVIDK 263 (437) T ss_pred CcceEEEecCC-ChhHHHHHHHHHHHHHhccCceEEEEeCCCC-C-------------CCceEEEeecceeecCcceech Confidence 56899999975 66778888999987743 3334432211 1 2222322333222222111111 Q ss_pred echHHHHHHHHhhhccCceeecCCceeeEeee----ccccchhHHhhhcCCceEEEEcCCCEE-EEcceecC----CCcc Q lcl|Aclame:pro 567 VPASLAAYRSIRTTDPETGLAPVGARRGVVTG----EPVRQVDWEDLYNNRINPIVRVGNDVL-LFGQKTML----NVNS 637 (742) Q Consensus 567 vPpSgavAGl~ArtD~e~Gv~~SPaN~~I~~~----~~ls~sE~d~LN~~GINtI~~fg~G~r-lWGnRTla----s~D~ 637 (742) .-.++++||++|..+ +..|+.|..+.+. ..++++|++.|.++|+.++.+.+++++ .+|-.|+. ..++ T Consensus 264 ~~~~a~vAG~~Ag~~----~~~S~t~~~~~~~~~v~~~~t~~e~~~~i~~G~~vl~~~~~~v~i~~gInTltt~~~~~~~ 339 (437) T protein:vir:10 264 TKATVWVAAASANAG----VEKSLTYEKYEDSVDVVGRLSHTETEDALLKGQFVFTARRGRAVVEQDINSHVSFTIEKNQ 339 (437) T ss_pred hhHHHHHHHHhccCc----cccCccccccCCcccccccCCHHHHHHHHhCCcEEEEEeCCeEEEEEccccccccCCCCCc Confidence 124688999999774 4557777665543 346789999999999999987766555 48887764 3467 Q ss_pred ccceeehhhhhHHHHHHHHHHHH-Hhhcc-cCCHHHHHHHHHHHHHHHHHHHhCCceeeEEEEEcCCCCHHHhhCCEEEE Q lcl|Aclame:pro 638 ALNRINVRRLLIVMRNRISQILS-SYLFE-NNTSENRLRAEALVRQYLESLRLRGAVTDYEVAIDSVTTPTDIDNNTLRA 715 (742) Q Consensus 638 ~wrfInVRR~~d~Ie~sI~~a~~-~~VfE-PNd~~l~~~V~~sInafL~~L~~~GAL~Gf~V~~DetNtp~dI~~GrL~i 715 (742) .|++|.++|++|+|.+.+++.+. +|+++ |||...|..++..|+.||++|+++|+|.+|.+...+.... -....+++ T Consensus 340 ~~~ki~vir~~D~i~~di~~~~~~~yiGk~~N~~~~r~~~~~~i~~yl~~l~~~g~I~~~~~~d~~v~~~--~~~~~v~v 417 (437) T protein:vir:10 340 DFRKNRILRTLDDIVNDTRYAFSEYFLGKVSNNEDGRQAFKANRIRYFKDLEARGAIEDFKVEDIEVLRG--ELKESVVV 417 (437) T ss_pred hhhhhhHHHHHHHHHHHHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCceeEEeecC--CCCCEEEE Confidence 89999999999999999999877 49998 7999999999999999999999999999988765433211 12457899 Q ss_pred EEEEEecCCceEEEEEEEEe Q lcl|Aclame:pro 716 RVTVQPARSIEYIDITFVIT 735 (742) Q Consensus 716 ~I~vaP~~PAEfI~l~f~it 735 (742) ++.++|+.+||+|.+++.+. T Consensus 418 ~~~v~~~dame~iy~ti~v~ 437 (437) T protein:vir:10 418 NVKVKPVDSMEKLYMTVTVE 437 (437) T ss_pred EEEEEEeeeeeeEEEEEEec Confidence 99999999999999999987 No 45 >protein:vir:102819 Length: 648 # NCBI annotation: tail sheath protein # Family: family:all:2449 # MgeID: mge:1610 # MgeName: YS40 # Cross-refs: genbank:acc:YP_874082;genbank:gi:118197689;genbank:GeneID:4496011 Probab=99.90 E-value=1.7e-23 Score=145.40 Aligned_cols=532 Identities=13% Similarity=0.068 Sum_probs=224.8 Q ss_pred eceeEeecccce--eeeeeeccccceEEEEeecCccccEEEEeecCCCcceEeecccCCCcceeee---------eeccc Q lcl|Aclame:pro 150 NAPSVTLPSNIV--PLFFYYEPYTGSITLQSSVNYSGLTLNYTVSKATTPWVYFAEYGTPTSSLTL---------YKGFY 218 (742) Q Consensus 150 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~ 218 (742) -|++|-.|++-+ |-.|.=+-..| ++-.=-|+....=.|=++|.|.|.....+ |.|-+ T Consensus 1 ma~~~yf~~~~~~~PGVyvee~~sg------------~~~i~gv~tsva~fvG~a~~Gp~~~p~~v~s~~~~~~~fggg~ 68 (648) T protein:vir:10 1 MAISVYFDGKLIKQLGAYVKTDLSA------------VKQINGVGTGIVALLGLAEGGETYKPYRLTSFAEAVSIFKGGP 68 (648) T ss_pred CeeeeeeCCCCccCCceEEEEeccc------------cccccCCCCceEEEEEeeCCCCCceeEEecCHHHHHHHhcCcc Confidence 233332333222 22222121222 21111122233345566666655433221 21111 Q ss_pred ----ccccccCcccceeeEEEeeeeecc-cCCceeccc---------eeEEEEEeeccCCCCCccceeeeeeecCCCCCe Q lcl|Aclame:pro 219 ----LEGIDLNSFNKQFVVSIENITVNR-EKGQVLYPS---------FDVVVHFRDIRGVSANTEYIRFRQVNLNPESPN 284 (742) Q Consensus 219 ----~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (742) +++.=+||-.+-+++.+++-+... .++-+...+ +.+-|..++ +...++--+ ++.+.++... T Consensus 69 l~~av~~~F~nGg~~~~~vRv~~~~~a~~~~~~~~~~a~~~g~~gn~i~~~v~~~~--~~~~~~~~l---~v~~~~~~~~ 143 (648) T protein:vir:10 69 LLEHIKAAFIGGAGEVVAVRIGNPTTASVSIPVAQNTSDTSPANLNFVSYEASTRS--NQIYVSFDL---DENFTSANEA 143 (648) T ss_pred HHHHHHHHHhCCCcEEEEEEcCCCcccceecceeEEeecccCCCCCceEEEEEEcC--CCcCceeEE---EEEecCCCcc Confidence 122225777777888876543321 112111111 111133333 333333223 3334333211 Q ss_pred eeecccCceEEEEc---CceEEecccccC------------CcceEEEEeccccccccccchhhhhhhhhhheecccceE Q lcl|Aclame:pro 285 YIERVIGNMTFEFD---GERIVTGGEYPN------------QVPFLRVVVSQDIKQNVAGVEKWVPVGFEGIYSVGDFTV 349 (742) Q Consensus 285 ~~~~~~~~~~~~~~---g~~~vtG~~~~n------------~~p~L~~si~~~~~~~~ag~s~~ip~al~aI~avg~~tv 349 (742) .+ |+.|+-. .....++..... .+.++-....+. +..++.+ ..+++. T Consensus 144 -~d----~~v~~i~~~~~~y~gt~~~~t~~v~~~~~~~~~~~~~~~~~~~~~~-----------v~~~~~~---~~~~~~ 204 (648) T protein:vir:10 144 -DD----TIIFTIYQKHPDFSVTRETFTFPRKFTTPTVLVKRGSTLFFVDRSI-----------VNAALAA---GPAFQT 204 (648) T ss_pred -cc----eeEEEeccCCCcccccceeccccccccccccccccccceeecCccc-----------hhhhhcc---Cccchh Confidence 11 1111110 000000000000 000000000000 0000000 000100 Q ss_pred EE-EEEEE--------Eeeecccccccc----chhhheeeeecccccceeeeeecccccccccccccceeeeccCCccee Q lcl|Aclame:pro 350 IV-NELTN--------VSIPVTDSAIIP----PMRFTRIEQITLSGGASFSVISNQPYGFNIQDSRHSYWLSPFKDDELI 416 (742) Q Consensus 350 ~v-~~itn--------v~~p~tdsa~vp----~~~~~li~~~~l~~ga~~~vl~~~~~~~~i~~s~~~~~Ls~l~d~s~~ 416 (742) .+ +.+.. ...|+++..... ....+.+.......+. ........+...........+ .+...... T Consensus 205 ~~v~~~~~~~~~~~~~~~~~~s~~~~~d~~~~~~~~~a~~~~~~~~~~--~~~~~~~~gd~~~~~~~~~~~-~~~~tp~~ 281 (648) T protein:vir:10 205 ALINLLKEQLQPTDVVQIFDASDTNPVDIPLGLFVYEVLYGGLFGFTK--SRLVKTSFGTVDDLLSNPLLF-NLSATPFF 281 (648) T ss_pred hhhhchhhhhhhhhhheecccccccccccccccccccccchhhhcCCc--chhhhhhhcccccccccccee-cccccccc Confidence 00 00000 011111100000 0000000000000000 000000000000000000000 00000000 Q ss_pred eeccccc--ccccccceeEee-------ccccccccc--ceeeeccCCcceEEEecCCccccccccccccccccch-hhH Q lcl|Aclame:pro 417 IGTELVL--PALDVSTEFGVS-------SWEEALPEF--SFLMPFQGGSDGYIRVDENEPDTIGRVKITPALLANY-ERL 484 (742) Q Consensus 417 v~td~~a--~a~d~s~~v~l~-------~~~~~~p~a--~~av~l~gGtdg~i~vd~~~~~~ig~~~~~~~~~a~r-tGL 484 (742) ...+... ...+....+... ......|.. .....++||+||........- .......++ .++ T Consensus 282 ~~~~~~~~~~~~~~~~~~~v~~~~~~~l~~~~~~p~~~~~~~t~L~GGtdG~~p~s~~~~-------~~~~~~~d~~d~l 354 (648) T protein:vir:10 282 DGSDYQDYTSLSDPANWFAKDAYTINHLVDTTINPHILATRIFSLSGGTNGDDGTGYYQT-------AVSNYINIWSQGL 354 (648) T ss_pred cccceeeeeccccccceeeeeccchhhcccccccCcccccccceecccccCCCccccccc-------ccccchhhHHHHh Confidence 0000000 000000111110 001111111 111246777777433211100 000111223 355 Q ss_pred HHhhccCCccEEEEcCC-----------CchHHHHHHHHHHHhhc--C----c--eEEEEECCCCCChHHHH--HHHHhc Q lcl|Aclame:pro 485 LPLLTEDQFDLVLTPYL-----------TFADHAGTVNAFINRAE--N----R--FLYLFDIAGDDDTENLA--ISLAGY 543 (742) Q Consensus 485 ~AL~~~d~v~LL~aPg~-----------t~s~v~aal~Al~a~a~--~----R--~~aI~D~p~~~~t~~~A--~a~r~~ 543 (742) ..++..+.+-++.+++. .....++.+.+|+..+. + | +.++..++. .++.... ...+.. T Consensus 355 ~~~~~~~~~~ivp~~~~~~~~~~~~~lt~~q~i~a~a~shv~~~s~~~~~~~r~~~~~~vg~~~-~es~~~se~~~~~~~ 433 (648) T protein:vir:10 355 ATLEEEEVNFVIPAYKFTNVTQLNDRLTIFKGIASTFLSHVQTMSQVNRRKARVGVFGLPAPSP-NESVTASEYLYNRNI 433 (648) T ss_pred hhccCCCceEEEeecccccccccccccCCccchHHHHHHHHHHhhhccccccccCeEEEeCCCC-chhHHHHHHHhhhhc Confidence 66665554433333321 23456667777776542 1 2 233333322 2222222 222333 Q ss_pred cCCcEEEE-----------EecceeeccccceeEech---HHHHHHHHhhhccCceeecCCceeeEeee-----ccccch Q lcl|Aclame:pro 544 INSSFATT-----------FFPWVRRLTNKGMRTVPA---SLAAYRSIRTTDPETGLAPVGARRGVVTG-----EPVRQV 604 (742) Q Consensus 544 ~~S~~aaL-----------~~PwVkv~d~~~~~~vPp---SgavAGl~ArtD~e~Gv~~SPaN~~I~~~-----~~ls~s 604 (742) +++.++.+ .+.+....+.+....+|| ++++||++++.. ++.||.|+.+.+. ..+++. T Consensus 434 ~~~~~a~~~~~d~~~~~~~~~~~~~~~~~G~~~~~p~~~~Aa~VAGl~a~l~----~~~s~T~k~i~~~~id~~~~~t~~ 509 (648) T protein:vir:10 434 LNTISAMFGGTDRAQAVVFPFYSNVFNDEGKVELLGGEFFASYVAGMHANRE----PQDSITFLPISGIGAEPLYNWTYT 509 (648) T ss_pred ccccceeeeecCCceEEeecccceeECCCCcEEecchhhHHHHHHhhhhccc----cccCcccceeeccccccccCCCHH Confidence 44332221 122333333334455787 788999999764 4556777655322 356789 Q ss_pred hHHhhhcCCceEEEEc-CC----CEEEE-cceec-CCCccccceeehhhhhHHHHHHHHH-HHHHhhcccCCHHHHHHHH Q lcl|Aclame:pro 605 DWEDLYNNRINPIVRV-GN----DVLLF-GQKTM-LNVNSALNRINVRRLLIVMRNRISQ-ILSSYLFENNTSENRLRAE 676 (742) Q Consensus 605 E~d~LN~~GINtI~~f-g~----G~rlW-GnRTl-as~D~~wrfInVRR~~d~Ie~sI~~-a~~~~VfEPNd~~l~~~V~ 676 (742) |++.|+++||.||.+. ++ ++++- |-.|. +++++.|+.++++|++|++.+.+++ ...+|+++||+...|.+++ T Consensus 510 qld~L~~~Gv~~ie~~~~~~~~~~~rvv~gITT~~~~~~~~~~eisv~ri~D~l~~~vr~~l~~~fIG~~n~~~~~~~ik 589 (648) T protein:vir:10 510 QKDDLISNRVLFVEKVKTSFGGIVYRIHHNPTTWLGPVTQGFQEFVLRRIDDFLQSYVYKNLQEQFIGRKSYGRKTENDI 589 (648) T ss_pred HHHHHhcCCcEEEEEecCCcceeeEEEeccceeecCCCCcceeeeeeeehhhHHHHHHHHHHhhhcCcccccHHHHHHHH Confidence 9999999999999764 22 23332 33332 2468889999999999999999987 5558999999999999999 Q ss_pred HHHHHHHHHHHhCCceeeEE---EEEcCCCCHHHhhCCEEEEEEEEEecCCceEEEEEEEEeecee Q lcl|Aclame:pro 677 ALVRQYLESLRLRGAVTDYE---VAIDSVTTPTDIDNNTLRARVTVQPARSIEYIDITFVITPTGV 739 (742) Q Consensus 677 ~sInafL~~L~~~GAL~Gf~---V~~DetNtp~dI~~GrL~i~I~vaP~~PAEfI~l~f~it~tG~ 739 (742) +.|.+||.++++.++|++|+ |.++ .+.+++++++.++|++|++||.+++.++.+-. T Consensus 590 ~~i~~~L~~~~~~~~I~~y~~~~v~~~-------~~~~vv~V~~~v~Pv~~i~~I~vti~it~~~~ 648 (648) T protein:vir:10 590 KVYTEALLSNLVGKQIVAYKDVKVTSN-------EDKTVYYVEFFYQPVTEIKFILVTMKVTFDLE 648 (648) T ss_pred HHHHHHHhhHhhcCcccCcccceEEEE-------ecCCEEEEEEEEEecceeeEEEEEEEEEeccC Confidence 99999999999999999874 3332 24589999999999999999999999887764 No 46 >protein:vir:101326 Length: 529 # NCBI annotation: gp22 # Family: family:all:9453 # MgeID: mge:1512 # MgeName: P1 # Cross-refs: genbank:acc:YP_006525;genbank:gi:46401679;genbank:GeneID:2777386 Probab=99.86 E-value=9.7e-23 Score=141.26 Aligned_cols=477 Identities=13% Similarity=0.092 Sum_probs=236.5 Q ss_pred CCcceeeeeecccccccccCcccceeeEEEeeeeecccCCceeccceeEEEEEeeccCCCCCccceeee-----eeecCC Q lcl|Aclame:pro 206 TPTSSLTLYKGFYLEGIDLNSFNKQFVVSIENITVNREKGQVLYPSFDVVVHFRDIRGVSANTEYIRFR-----QVNLNP 280 (742) Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~ 280 (742) ...-||+.+-| --.||-+|-.+.|-..+.-. +-|- ..+-+|..|+- |+.--- ++.. ++==-| T Consensus 1 ~~~ysi~q~ig-~aSGvav~pi~~d~t~~~~~-----g~g~---~v~a~Vgif~R--G~i~k~--~~Vt~~n~~~~LGep 67 (529) T protein:vir:10 1 MSQYSIQQSLG-NASGVAVSPINADATLSTGV-----ALNS---SLWAGIGVFAR--GKPFTV--LAVTESNYEDVLGEP 67 (529) T ss_pred CCceehhhhhh-hhcccccCCcCcccccchhe-----ecCc---eEEEEEEEeec--CCCcce--EEEchhHHHHHhccc Confidence 23334444444 23455555555554433110 0011 12345555554 333110 1000 010112 Q ss_pred CCC---eeeecccCceEEEEcCceEEecccccCCc--ceEEEEeccccccccccchhhhhhhhhhheecccceEEEEEEE Q lcl|Aclame:pro 281 ESP---NYIERVIGNMTFEFDGERIVTGGEYPNQV--PFLRVVVSQDIKQNVAGVEKWVPVGFEGIYSVGDFTVIVNELT 355 (742) Q Consensus 281 ~~~---~~~~~~~~~~~~~~~g~~~vtG~~~~n~~--p~L~~si~~~~~~~~ag~s~~ip~al~aI~avg~~tv~v~~it 355 (742) .+| .+.|+.+=.......|.=.|.= +.+.++ |++.+-+..+ .+.+.|.+.+-.. .+.|. T Consensus 68 ~~~~~ga~~E~~~h~~eA~~~~s~yVVR-vv~~dak~p~i~~~~~~~-----~~~s~~~~s~~~~-l~~G~--------- 131 (529) T protein:vir:10 68 LKPSSGSQFEPIRHVYEAIQQTSGYVVR-AVPDDAKFPIIMFDESGE-----PAYSALPYGSEIE-LDSGE--------- 131 (529) T ss_pred cCCCcchhhhhHhhhhhhhcCCceEEEE-EcccccCCceEEecCCcc-----chhhccccccccc-ccccc--------- Confidence 222 1234433333333333211111 111221 3332221111 1223332211111 11111 Q ss_pred EEeeecccccc--ccchhhheeeeecc-cccceeeeeecccccccccccccceeeeccCCcceeeecccccccc--cccc Q lcl|Aclame:pro 356 NVSIPVTDSAI--IPPMRFTRIEQITL-SGGASFSVISNQPYGFNIQDSRHSYWLSPFKDDELIIGTELVLPAL--DVST 430 (742) Q Consensus 356 nv~~p~tdsa~--vp~~~~~li~~~~l-~~ga~~~vl~~~~~~~~i~~s~~~~~Ls~l~d~s~~v~td~~a~a~--d~s~ 430 (742) +..+-..|+.. -+..+.+.-...+. .+.+.+.....+....+.....+.+..+-..+...-++...+.+.. ..+. T Consensus 132 ~~~iy~~Dgd~~~s~~~~l~i~~~~ads~g~e~~~l~~~~~~~~g~~~~let~~~sl~~~a~dd~G~~~yl~svle~~s~ 211 (529) T protein:vir:10 132 AFAIYVDDGDPCISPTRELTIETATADSAGNERFLLKLTQTTSLGVVTTLETHTVSLAEEAKDDMGRLCYLPTALEARSK 211 (529) T ss_pred eEEEEEecCcCccCCceEEEEEeeccccCCCccceeeEEEEeecCCceEEEEEEeeeeechhhhcCCccchhHHHhhccC Confidence 01111112211 11111111111111 1123333332222222222222333222222222222333333322 1111 Q ss_pred eeEe-ec--cccccc-ccceeeeccCCcceEEEecCCccccccccccccccccchhhHHHhhccC-CccEEEEcCCCchH Q lcl|Aclame:pro 431 EFGV-SS--WEEALP-EFSFLMPFQGGSDGYIRVDENEPDTIGRVKITPALLANYERLLPLLTED-QFDLVLTPYLTFAD 505 (742) Q Consensus 431 ~v~l-~~--~~~~~p-~a~~av~l~gGtdg~i~vd~~~~~~ig~~~~~~~~~a~rtGL~AL~~~d-~v~LL~aPg~t~s~ 505 (742) .... .. .....+ .......+++|+||.- + .+ ...+...++.+|+..+ +++.++.-|--+.. T Consensus 212 ~l~ai~~~e~~~t~~~~t~~d~~f~~GtdG~~------~-~i-------~s~~y~~A~~~L~n~p~d~~~il~~g~y~~a 277 (529) T protein:vir:10 212 YLRAVVNEELISTAKVTNKKSLAFTGGTNGDQ------S-KI-------STAAYLRAVKVLNNAPYMYTAVLGLGCYDNA 277 (529) T ss_pred ceeeeeeeccccccchhhhhhhhccCCccccc------c-cc-------chHHHHHHHHHhcCCcceeeeeeccCCccHH Confidence 1111 10 000000 0011124555655511 0 00 0112445777776543 34555555544556 Q ss_pred HHHHHHHHHHhhcCceEEEEECCCCCChHHHHHHHHhccC---CcE---EEEEecceeecc--ccceeEechHH--HHHH Q lcl|Aclame:pro 506 HAGTVNAFINRAENRFLYLFDIAGDDDTENLAISLAGYIN---SSF---ATTFFPWVRRLT--NKGMRTVPASL--AAYR 575 (742) Q Consensus 506 v~aal~Al~a~a~~R~~aI~D~p~~~~t~~~A~a~r~~~~---S~~---aaL~~PwVkv~d--~~~~~~vPpSg--avAG 575 (742) +..++..+|+.. |..+..|+|+..+. +.|.+|...++ +.+ ..++|||. ..| +++...+++|| .+|+ T Consensus 278 ~I~~L~~ic~~~--~~d~f~DV~~~LT~-~aA~~~~e~~gl~~~~~~~~s~y~~P~~-~~D~~tg~k~~~GlsG~A~~ak 353 (529) T protein:vir:10 278 AITALGKICADR--LIDGFFDVKPTLTY-AEALPAVEDTGLLGTDYVSCSVYHYPFS-CKDKWTQSRVVFGLSGVAYAAK 353 (529) T ss_pred HHHHHHHHHhhh--hhcEEEcCCCCcCH-HHHHHHHHhcCccccCceeeEEEEccee-eccccccCceeeCCCcceeecc Confidence 666666666543 34455699888765 45777777554 232 45678986 344 45556778888 4444 Q ss_pred HH--hhhccCceeecCCcee--------eEeeeccccchhHHhhhcCCceEEEEc-CCCEEEEcceecCCCccccceeeh Q lcl|Aclame:pro 576 SI--RTTDPETGLAPVGARR--------GVVTGEPVRQVDWEDLYNNRINPIVRV-GNDVLLFGQKTMLNVNSALNRINV 644 (742) Q Consensus 576 l~--ArtD~e~Gv~~SPaN~--------~I~~~~~ls~sE~d~LN~~GINtI~~f-g~G~rlWGnRTlas~D~~wrfInV 644 (742) .. +++....|||.+|+.. +|......++-|...|-.++||++.-. ++++.+-.+-|++.+++.|||+|+ T Consensus 354 argv~~na~v~g~hY~pAGe~r~~inr~~I~~ly~~d~~e~~~lv~~riNPV~~~~~g~~~idDsLt~~~knny~R~~hv 433 (529) T protein:vir:10 354 ARGVKKNSDVGGWHYSPAGEERAVIARASIQPLYPEDTPDEEAMVKGRLNKVSVGTSGQMIIDDALTCCTQDNYLHFQHV 433 (529) T ss_pred ccceeecccccccccccCCCccceeecccceeccCCCccCHHHHHhhccCeeeeeccCcceeeeeeceeeeCCchhhhhH Confidence 43 3455556789999874 344445667778888999999998643 434333222444456899999999 Q ss_pred hhhhHHHHHHHHHHHHHhhcccCCHHHHHHHHHHHHHHHHHHHhCCceee-----------EEEEEcCCCCHHHhhCCEE Q lcl|Aclame:pro 645 RRLLIVMRNRISQILSSYLFENNTSENRLRAEALVRQYLESLRLRGAVTD-----------YEVAIDSVTTPTDIDNNTL 713 (742) Q Consensus 645 RR~~d~Ie~sI~~a~~~~VfEPNd~~l~~~V~~sInafL~~L~~~GAL~G-----------f~V~~DetNtp~dI~~GrL 713 (742) ++|+++|++.+.+..+|.++||++..+|. +++.+..+|..+|+.|+|.+ |.+.+ + ..+.++| T Consensus 434 ~~lmn~I~~~~~k~a~~~~~~Pd~it~~g-l~~~l~~~L~r~~asgalv~prdp~~~G~epy~~~V----~--q~d~D~~ 506 (529) T protein:vir:10 434 PSLMNAISRFFVQLARQMKHSPDGITAAG-LTKGMTKLLDRFVASGALVAPRDPDADGTEPYVLKV----T--QAEFDKW 506 (529) T ss_pred HHHHHHHHHHHHHHHHHHhhCCChHHHHH-HHHhHHHHHHHHHhcCceecccCccCCCCCceEEEE----e--ecccCeE Confidence 99999999999999999999999999888 99999999999999999985 55544 2 3344899 Q ss_pred EEEEEEEecCCceEEEEEEEEee Q lcl|Aclame:pro 714 RARVTVQPARSIEYIDITFVITP 736 (742) Q Consensus 714 ~i~I~vaP~~PAEfI~l~f~it~ 736 (742) .+++.++|..-+.+|...-+.-+ T Consensus 507 ~v~~~~~ptGv~Rri~~~p~l~~ 529 (529) T protein:vir:10 507 EVVWACCPTGVARRIQGVPLLIK 529 (529) T ss_pred EEEEEeecCCceeeEEeeeeecC Confidence 99999999999999988776666 No 47 >protein:vir:105470 Length: 451 # NCBI annotation: putative phage sheath tail protein # Family: family:all:632 # MgeID: mge:1502 # MgeName: KC5a # Cross-refs: genbank:acc:YP_529880;genbank:gi:90592620;genbank:GeneID:3974534 Probab=99.86 E-value=4.4e-21 Score=132.17 Aligned_cols=422 Identities=15% Similarity=0.076 Sum_probs=205.3 Q ss_pred CCCCccceeeeeeecCCCCCe-eeecccCc-eEEEEcCceEEe-cccccCCc---ceEEEEeccccccccccchhhhhhh Q lcl|Aclame:pro 264 VSANTEYIRFRQVNLNPESPN-YIERVIGN-MTFEFDGERIVT-GGEYPNQV---PFLRVVVSQDIKQNVAGVEKWVPVG 337 (742) Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~g~~~vt-G~~~~n~~---p~L~~si~~~~~~~~ag~s~~ip~a 337 (742) ...||- ...|-.-|- |++-+... -...--|.|.+. =+...+|+ |....+..+=....|.......-.+ T Consensus 1 magg~~------~~~~K~~PGvYi~~~~~~~~~~~~~~~~~~~~i~~~~~~g~~~~v~i~~~~d~~~~fG~~~~~~~~~~ 74 (451) T protein:vir:10 1 MAGGTW------KAQDKRRPGTYINVVGNGQREAASSLGRVLLIRDKGLGWGKNGVIEVEANSDFTKKLGTTLDDPSLTA 74 (451) T ss_pred CCceee------ccceeecCceEEEEeccCcceeeccCCcEEEEEeeecCCCCcccEEeecHHHHHHHcCCcccchhHHH Confidence 111110 011111111 11111111 111111222100 01111222 2222333222223443222111112 Q ss_pred hhhheecccceEEEEEEEEEeeeccccccccchhhheeeeecccccceeeeeecccccccccccccceeeeccCCcceee Q lcl|Aclame:pro 338 FEGIYSVGDFTVIVNELTNVSIPVTDSAIIPPMRFTRIEQITLSGGASFSVISNQPYGFNIQDSRHSYWLSPFKDDELII 417 (742) Q Consensus 338 l~aI~avg~~tv~v~~itnv~~p~tdsa~vp~~~~~li~~~~l~~ga~~~vl~~~~~~~~i~~s~~~~~Ls~l~d~s~~v 417 (742) +...+ .|+.++.+.++... ..++.+. .......--+++-..|..+.+....... ......+....+.+.+. T Consensus 75 ~~~~~-~g~~~v~~yrl~~g-~~a~~t~--~~~~~~~~Aky~G~~Gn~i~v~v~~~~~-----d~~~~~v~t~~g~~~vd 145 (451) T protein:vir:10 75 LKETL-KGASKVLVLNPNEG-TAATLTK--EGLPWTVTANYPGEKGNQITVSVEVSPA-----DQNAATVSTIFGTKLVD 145 (451) T ss_pred HHHHh-cCCcEEEEEEcCCC-ceEEEEe--ecCceEEEEeeCCcCCceEEEEEecccC-----CcCceEEEEEECCeEEE Confidence 33333 36677776665311 1111100 0000011112222223233332211110 00111111111111111 Q ss_pred eccc---ccccccccceeEeecccccccccceeeeccCCcceEEEecCCccccccccccccccccchhhHHHhhccCCcc Q lcl|Aclame:pro 418 GTEL---VLPALDVSTEFGVSSWEEALPEFSFLMPFQGGSDGYIRVDENEPDTIGRVKITPALLANYERLLPLLTEDQFD 494 (742) Q Consensus 418 ~td~---~a~a~d~s~~v~l~~~~~~~p~a~~av~l~gGtdg~i~vd~~~~~~ig~~~~~~~~~a~rtGL~AL~~~d~v~ 494 (742) .... -......+..+.+.......+.......+.++.++ +. ......++.......+...++ T Consensus 146 ~qtv~~~~~~el~~nd~V~a~~~~~g~~~~~~~~~l~~~~~g------------g~---~~~~~~~~~~~l~~~e~~~~n 210 (451) T protein:vir:10 146 EQSIKFNELDKFKGNDYITAKVVEEGSSKPVAFTNVSGTLTG------------GT---TTESNKVESLLNDALENEEYA 210 (451) T ss_pred EEEeeccchhhccCCceEEEEecccccccceeeeeccccccc------------cc---ccCCccchHHHHHHhccceee Confidence 0000 00011122333332222222111111122211111 00 011122333333333445688 Q ss_pred EEEEcCCCc-hHHHHHHHHHHHhhcC----ceEEEEECCCCCChHHHHHHHHhccCCcEEEEEecceeeccccceeEec- Q lcl|Aclame:pro 495 LVLTPYLTF-ADHAGTVNAFINRAEN----RFLYLFDIAGDDDTENLAISLAGYINSSFATTFFPWVRRLTNKGMRTVP- 568 (742) Q Consensus 495 LL~aPg~t~-s~v~aal~Al~a~a~~----R~~aI~D~p~~~~t~~~A~a~r~~~~S~~aaL~~PwVkv~d~~~~~~vP- 568 (742) .+++|+.+. ...+..+.++|.++++ ++.+++..+.... .+......+...+...+. ...+ T Consensus 211 ~l~~~~~~~~~~i~~~~~a~ik~~r~~~g~~~~aVl~~~~~~~-----------~d~egiinv~n~~~~~dg---~~~~~ 276 (451) T protein:vir:10 211 VVTTAGFEPSSNMNKLVVEAVKRLRENEGRKVRGVIPTDADTT-----------YNYEGISTVVNGYTLSDG---TNVDV 276 (451) T ss_pred EEEEccCCCchHHHHHHHHHHHHHHHhcCCeEEEEecCccCCC-----------CCCcceEEeecceEecCc---eeech Confidence 889988754 5567788899988742 2334433221111 233344444444332221 2222 Q ss_pred --hHHHHHHHHhhhccCceeecCCceeeEeee----ccccchhHHhhhcCCceEEE-EcCCCEE-EEcceecC----CCc Q lcl|Aclame:pro 569 --ASLAAYRSIRTTDPETGLAPVGARRGVVTG----EPVRQVDWEDLYNNRINPIV-RVGNDVL-LFGQKTML----NVN 636 (742) Q Consensus 569 --pSgavAGl~ArtD~e~Gv~~SPaN~~I~~~----~~ls~sE~d~LN~~GINtI~-~fg~G~r-lWGnRTla----s~D 636 (742) .++++||++|..+ +..|+.|..+.+. ..++++|++.+.++|..++. +.+++++ .+|-.|+. ..+ T Consensus 277 ~~~~~~vAG~~Ag~~----~~~S~T~~~~~~~~~v~~~~t~~e~~~~i~~G~lvl~~~~g~~v~i~~~INTltt~~~~k~ 352 (451) T protein:vir:10 277 KDATGYFAGISASAD----VATSLTYFEVEDAVSAYPKFDNEKTIKALDAGQIVFTTRPGQRVVIEQDINSLHKFTAEKP 352 (451) T ss_pred hhhHHHHHHHHcccc----cccCccceecCCceeeeeeCCHHHHHHHHhCCeEEEEEEcCCeEEEEEccccceecCCCCC Confidence 3688999999764 5567777655433 34678999999999998875 5566765 48888873 345 Q ss_pred cccceeehhhhhHHHHHHHHHHHHH-hhcc-cCCHHHHHHHHHHHHHHHHHHHhCCceeeEEEEEcCCCCHHHhhCCEEE Q lcl|Aclame:pro 637 SALNRINVRRLLIVMRNRISQILSS-YLFE-NNTSENRLRAEALVRQYLESLRLRGAVTDYEVAIDSVTTPTDIDNNTLR 714 (742) Q Consensus 637 ~~wrfInVRR~~d~Ie~sI~~a~~~-~VfE-PNd~~l~~~V~~sInafL~~L~~~GAL~Gf~V~~DetNtp~dI~~GrL~ 714 (742) ..|++|.++|++|.|.+.++..+.. |+++ |||...|..++..|++||++|+++|+|.+|.. -|.+-.+ .-....++ T Consensus 353 ~~~~ki~vir~~D~i~~di~~~~~~~yiGk~~N~~~gr~~~~~~i~~yl~~l~~~g~i~~~~~-~d~~v~~-~~~~~~v~ 430 (451) T protein:vir:10 353 QAFSKNRVIRTLDEIATNTENTFERTYLGNVGNNAAGRDLFKADRIAYLTSLQNRNMIQSFAN-TDITVEA-GNDMDSIV 430 (451) T ss_pred cchhhhhHHHHHHHHHHHHHHHhhhccceecCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCc-cceEEee-cCCCCEEE Confidence 7899999999999999999999875 9997 69999999999999999999999999998763 1211111 01246799 Q ss_pred EEEEEEecCCceEEEEEEEEe Q lcl|Aclame:pro 715 ARVTVQPARSIEYIDITFVIT 735 (742) Q Consensus 715 i~I~vaP~~PAEfI~l~f~it 735 (742) +.+.++|+..||+|.+++.+. T Consensus 431 v~~~v~pvdame~iy~t~~v~ 451 (451) T protein:vir:10 431 VNLAVTPVDAMEKLYMTMVVR 451 (451) T ss_pred EEEEEEEEeeeeeEEEEEEEc Confidence 999999999999999999877 No 48 >protein:vir:78986 Length: 436 # NCBI annotation: putative sheath tail protein # Family: family:all:632 # MgeID: mge:1861 # MgeName: phiC2 # Cross-refs: genbank:acc:YP_001110731;genbank:gi:134287348;genbank:GeneID:4955160 Probab=99.76 E-value=9.9e-19 Score=119.29 Aligned_cols=406 Identities=14% Similarity=0.074 Sum_probs=208.9 Q ss_pred cCCCCCccceeeeeeecCCCCCeeeecccCceEE-EEcCceEEec-ccccCCcceEEEEeccc---c--ccccccchhhh Q lcl|Aclame:pro 262 RGVSANTEYIRFRQVNLNPESPNYIERVIGNMTF-EFDGERIVTG-GEYPNQVPFLRVVVSQD---I--KQNVAGVEKWV 334 (742) Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~vtG-~~~~n~~p~L~~si~~~---~--~~~~ag~s~~i 334 (742) -+...||- +..|-.-|-.--.+++.... ...|.|=+.. -...+|+|...+..-.. . ....-|.+... T Consensus 1 ~~magg~~------~~~~K~~PG~Y~n~~~~~~~~~~~~~rGi~a~p~~~~wGp~~~v~~i~~~~~~~~~~~~~G~~~~~ 74 (436) T protein:vir:78 1 MALGGGTF------VTQNKVLPGSYINFVSATRATSSLSDRGIVAMPLELDWGIDEEVFQVTSDDFEKYSTKYFGYDYTH 74 (436) T ss_pred Ccccceee------ccceeecCceEEEEEecCcceeeccCCeEEEEEEEecCCCCceeEEeecccchHHHHHHhcCccch Confidence 12222221 11122222222222222222 1234441111 11126776544322211 0 11111233333 Q ss_pred hhh--hhhheecccceEEEEEEEEEeeeccccccccchhhheeeeecccccceeeeeecccccccccccccceeeeccCC Q lcl|Aclame:pro 335 PVG--FEGIYSVGDFTVIVNELTNVSIPVTDSAIIPPMRFTRIEQITLSGGASFSVISNQPYGFNIQDSRHSYWLSPFKD 412 (742) Q Consensus 335 p~a--l~aI~avg~~tv~v~~itnv~~p~tdsa~vp~~~~~li~~~~l~~ga~~~vl~~~~~~~~i~~s~~~~~Ls~l~d 412 (742) |.. +...+ .++.++...++.+.. .++ +.+ ...+++-..|..+.+.............-..+.-....| T Consensus 75 ~~~~~l~~~~-~~~~tv~~yrl~~G~-~a~--~~v------~~Aky~g~~gn~i~v~v~~~~~d~~~~dv~~~~g~~~~d 144 (436) T protein:vir:78 75 EKLKGLRDLF-KNIRLGYFYKLNKGV-KAS--CSI------ATARCSGIRGNDLKVIVTTNIDDNAKFDVVTLLDNKKVD 144 (436) T ss_pred HHHHHHHHHh-cCCCEEEEEECCCcc-eee--eee------eeeecCCCCCcEEEEEecccccccCceEEEEEecchhhh Confidence 322 22222 356677766653211 000 000 111222233333333221110000000000000000111 Q ss_pred cceeeecccccccccccceeEeecccccccccceeeeccCCcceEEEecCCccccccccccccccccch-hhHHHhhccC Q lcl|Aclame:pro 413 DELIIGTELVLPALDVSTEFGVSSWEEALPEFSFLMPFQGGSDGYIRVDENEPDTIGRVKITPALLANY-ERLLPLLTED 491 (742) Q Consensus 413 ~s~~v~td~~a~a~d~s~~v~l~~~~~~~p~a~~av~l~gGtdg~i~vd~~~~~~ig~~~~~~~~~a~r-tGL~AL~~~d 491 (742) ...+. .......+..+.+... + .........++||++|.. ....++ ..|.+|+.. T Consensus 145 ~~~~~----~~~~l~~n~~V~~~~~-g-~la~~a~~~LtGG~dG~~-----------------~T~~dy~~al~~le~~- 200 (436) T protein:vir:78 145 TQIAK----VITELQDNDYVTWKKE-A-TLEATAGLTFTNGTNGEA-----------------VTGTEYQAFLDKIESY- 200 (436) T ss_pred hhhHH----HHhhccCCceEEEEec-c-cccccceeeeeccccccc-----------------cchHHHHHHHHHHccc- Confidence 00000 0111123344444321 1 122233455666666521 001233 345555544 Q ss_pred CccEEEEcCCCchHHHHHHHHHHHhhcC----ceEEEEECCCCCChHHHHHHHHhccCCcEEEEEecceeeccccceeEe Q lcl|Aclame:pro 492 QFDLVLTPYLTFADHAGTVNAFINRAEN----RFLYLFDIAGDDDTENLAISLAGYINSSFATTFFPWVRRLTNKGMRTV 567 (742) Q Consensus 492 ~v~LL~aPg~t~s~v~aal~Al~a~a~~----R~~aI~D~p~~~~t~~~A~a~r~~~~S~~aaL~~PwVkv~d~~~~~~v 567 (742) .++.+++|+. ++..++.+.+++.+++. ++.+++...... +.....-+-..+ +...+- T Consensus 201 ~fn~l~~~~~-d~~~~~~~~a~ikr~re~~g~~~~aV~~~~~~~-------------d~EgIInv~n~v-----~g~~~~ 261 (436) T protein:vir:78 201 SFNALGCLAT-TAEIKSLFVEFTKRMRDKVGAKFQTVLYKKNDA-------------DYEGVVSVENKI-----KDTGLL 261 (436) T ss_pred ceeEEEecCC-ChHHHHHHHHHHHHHHhhcCCeEEEEecCCCCC-------------CCceEEEeeccc-----CCceec Confidence 6899999984 77788889999988753 233333221111 111111111111 111122 Q ss_pred --chHHHHHHHHhhhccCceeecCCceeeEeee----ccccchhHHhhhcCCceEEEEcCCCEEE-EcceecC----CCc Q lcl|Aclame:pro 568 --PASLAAYRSIRTTDPETGLAPVGARRGVVTG----EPVRQVDWEDLYNNRINPIVRVGNDVLL-FGQKTML----NVN 636 (742) Q Consensus 568 --PpSgavAGl~ArtD~e~Gv~~SPaN~~I~~~----~~ls~sE~d~LN~~GINtI~~fg~G~rl-WGnRTla----s~D 636 (742) -.++++||++|..+. ..|+.|..+.+. ..++++|.+.+.++|.-++.+.++++++ -|-.|+. ..+ T Consensus 262 ~~~~~a~vAG~~Ag~~~----~~S~T~~~~~~~~~v~~~~t~~e~~~ai~~G~lvl~~d~~~v~I~~~VNTltt~~~~k~ 337 (436) T protein:vir:78 262 ESSLIYWTTGAIAGCDI----NKSNTNKRYDGEFDVDVNYTQIHLEEALKTGKFIFHKVGDEVHVLEDINTFVSFTDEKN 337 (436) T ss_pred hhHHHHHHHHHHhcCcc----ccCccceecCccccccccCCHHHHHHHHhCCeEEEEEeCCeEEEEEccccceecCCCCC Confidence 257889999997754 446666655433 3467899999999999888876777655 4555652 345 Q ss_pred cccceeehhhhhHHHHHHHHHHHH-Hhhcc-cCCHHHHHHHHHHHHHHHHHHHhCCceeeEEE---EEcCCCCHHHhhCC Q lcl|Aclame:pro 637 SALNRINVRRLLIVMRNRISQILS-SYLFE-NNTSENRLRAEALVRQYLESLRLRGAVTDYEV---AIDSVTTPTDIDNN 711 (742) Q Consensus 637 ~~wrfInVRR~~d~Ie~sI~~a~~-~~VfE-PNd~~l~~~V~~sInafL~~L~~~GAL~Gf~V---~~DetNtp~dI~~G 711 (742) ..|+.|.++|++|+|.+.+++.+. .|+++ ||+..-|..++..|+.||++|.++|+|..|.. ..++.+ ... T Consensus 338 ~~~~kI~vir~~D~i~~di~~~~~~~yiGKv~N~~dgr~~l~~~i~~yl~~L~~~g~I~~f~~~Dv~v~~~~-----~~~ 412 (436) T protein:vir:78 338 DDFSSNQSVRVLDQIANDIATLFNTKYLGEVPNDKSGRISFWNDVVKHHEQLQNMRAIEDFKADDVSVEPGS-----DKK 412 (436) T ss_pred cchhhhhHHHHHHHHHHHHHHHhhhccccccCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEeecC-----CCC Confidence 689999999999999999999876 59997 69999999999999999999999999998763 332222 245 Q ss_pred EEEEEEEEEecCCceEEEEEEEEe Q lcl|Aclame:pro 712 TLRARVTVQPARSIEYIDITFVIT 735 (742) Q Consensus 712 rL~i~I~vaP~~PAEfI~l~f~it 735 (742) .+++++.++|+..||+|.+++.+. T Consensus 413 ~v~v~~~v~pvdamekiy~ti~v~ 436 (436) T protein:vir:78 413 TVVVSDAVKVISAMSKLYMTVSVS 436 (436) T ss_pred EEEEEEEEEEEEeeeeEEEEEEEC Confidence 688999999999999999999988 No 49 >protein:vir:102359 Length: 356 # NCBI annotation: XkdK protein # Family: family:all:632 # MgeID: mge:1566 # MgeName: phi CD119 # Cross-refs: genbank:acc:YP_529565;genbank:gi:90592650;genbank:GeneID:3974491 Probab=99.56 E-value=3.3e-15 Score=99.97 Aligned_cols=318 Identities=12% Similarity=0.104 Sum_probs=171.4 Q ss_pred EEeeeccccccccchhhheeeeecccccc---eeeeeecccccccccccccceeeeccCCcceeeeccccccccccccee Q lcl|Aclame:pro 356 NVSIPVTDSAIIPPMRFTRIEQITLSGGA---SFSVISNQPYGFNIQDSRHSYWLSPFKDDELIIGTELVLPALDVSTEF 432 (742) Q Consensus 356 nv~~p~tdsa~vp~~~~~li~~~~l~~ga---~~~vl~~~~~~~~i~~s~~~~~Ls~l~d~s~~v~td~~a~a~d~s~~v 432 (742) ..+.|..+- .|..........|+ ...++-+.. .....++...+. ++... ......+ T Consensus 1 ~~glp~i~i------~f~~~a~ta~~~g~rGiv~~il~d~~--------~~~~~~~~~~~v-----~~~~~--~~n~~~i 59 (356) T protein:vir:10 1 MAGLVNINI------EFKELATSFIQRSKAGIVAIILKDTT--------KMYKELTSEDDI-----PISLS--ADNKKYI 59 (356) T ss_pred CCCCCceeE------EEeecceeeccCCccceEEEEEecCC--------cceeEEeccccc-----hhHHH--HHHHHHH Confidence 111111111 11111111111111 111111100 000011111000 00000 0000000 Q ss_pred EeecccccccccceeeeccCCcceEEEecCCccccccccccccccccch-hhHHHhhccCCccEEEEcCCCchHHHHHHH Q lcl|Aclame:pro 433 GVSSWEEALPEFSFLMPFQGGSDGYIRVDENEPDTIGRVKITPALLANY-ERLLPLLTEDQFDLVLTPYLTFADHAGTVN 511 (742) Q Consensus 433 ~l~~~~~~~p~a~~av~l~gGtdg~i~vd~~~~~~ig~~~~~~~~~a~r-tGL~AL~~~d~v~LL~aPg~t~s~v~aal~ 511 (742) ...+.|+..+.....+... ..... +..+++ +.|.+++ ..+++.+++|+. ++..+..+. T Consensus 60 --------------~~~~~g~~~~~~~~~p~~~---~~~~~--~t~~~y~~aL~~le-~~~fn~l~~~~~-d~~~~~~~~ 118 (356) T protein:vir:10 60 --------------KYGFVGATDNEKVLRPSKV---IISTF--TEDGKVEDILEELE-SVEFNYLCMPEA-IEAEKTKIV 118 (356) T ss_pred --------------HHHhhccccccccccceee---eeecc--cCchhHHHHHHHhc-CccceEEEecCC-ChHHHHHHH Confidence 0111222211111111110 00000 111233 3566665 457899999984 567788889 Q ss_pred HHHHhhcC---c-eEEEEECCCCCChHHHHHHHHhccCCcEEEEEecceeeccccceeEechHHHHHHHHhhhccCceee Q lcl|Aclame:pro 512 AFINRAEN---R-FLYLFDIAGDDDTENLAISLAGYINSSFATTFFPWVRRLTNKGMRTVPASLAAYRSIRTTDPETGLA 587 (742) Q Consensus 512 Al~a~a~~---R-~~aI~D~p~~~~t~~~A~a~r~~~~S~~aaL~~PwVkv~d~~~~~~vPpSgavAGl~ArtD~e~Gv~ 587 (742) +++.++++ + +.++. +.. . .+.....-+-..+. .+.........++++||++|..+..+ T Consensus 119 a~ikr~r~~~~~~~~~V~--~~~-~-----------aD~EgIInv~n~~~-~~g~~~t~~~~~~~vAG~~Ag~~~n~--- 180 (356) T protein:vir:10 119 TWIKKIREEESTEAKAVL--ANI-K-----------ADNEAIINFTENVV-VDGEEITAEKYTTRVASLIASTPNTQ--- 180 (356) T ss_pred HHHHHHHhcCCcEEEEEe--cCC-C-----------CCCceeEEeecCeE-ecceeechhHHHHHHHHHHhccchhc--- Confidence 99988764 2 22322 111 0 11111111111111 11111111234789999999876444 Q ss_pred cCCceeeEe---eeccccchhHHhhhcCCceEEEEcCCCEEE-EcceecC----CCccccceeehhhhhHHHHHHHHHHH Q lcl|Aclame:pro 588 PVGARRGVV---TGEPVRQVDWEDLYNNRINPIVRVGNDVLL-FGQKTML----NVNSALNRINVRRLLIVMRNRISQIL 659 (742) Q Consensus 588 ~SPaN~~I~---~~~~ls~sE~d~LN~~GINtI~~fg~G~rl-WGnRTla----s~D~~wrfInVRR~~d~Ie~sI~~a~ 659 (742) |+-|..+. ....++++|.+.+.++|--++.+.++..++ -|-.|+. ..+..|+.|.+.|++|.|.+.+++.. T Consensus 181 -S~T~~~~~~~~~~~~~t~~e~~~ai~~G~lvl~~d~~~V~I~~~VNSltt~t~~k~~~f~Kirvvr~~D~i~~Di~~~f 259 (356) T protein:vir:10 181 -SITYAPLDEVESIVKIDKASADAKVQAGELILRRLSGKIRIARGINSLTTLTAEKGEIFQKIKLVDTKDLISKDIKNIY 259 (356) T ss_pred -cccceecCCccccccCCHHHHHHHHhCCeEEEEEEcCeEEEEecCccceecCCCCCcchhhhHHHHHHHHHHHHHHHHH Confidence 44444333 233567889999999999888776666554 5656653 34567999999999999999999998 Q ss_pred H-Hhhcc-cCCHHHHHHHHHHHHHHHHHHHhCCcee-eEEEEEcCCCCHH---------------HhhC----CEEEEEE Q lcl|Aclame:pro 660 S-SYLFE-NNTSENRLRAEALVRQYLESLRLRGAVT-DYEVAIDSVTTPT---------------DIDN----NTLRARV 717 (742) Q Consensus 660 ~-~~VfE-PNd~~l~~~V~~sInafL~~L~~~GAL~-Gf~V~~DetNtp~---------------dI~~----GrL~i~I 717 (742) . .|+++ ||+..-|..++..++.||++|.++|+|. ++.+..|.+.... .+.+ -.+++.+ T Consensus 260 ~~~yiGKv~N~~dgr~~l~~ai~~y~~~L~~~~~I~~~~~~eid~e~q~~~~~~~g~d~~~~~d~~v~~~~~~~~v~~~~ 339 (356) T protein:vir:10 260 VEKYLRKCPNTYDNKCLFIVAVQSYLTELAKQELIDSNFTVEIDLEKQKEYLEGKKIAVSKMKENEIKEANTGSNGFYLI 339 (356) T ss_pred hhccccccCCCHHHHHHHHHHHHHHHHHHHhCCccccCceeEecccchHHHhhhccccccccccceeecccCCcEEEEEE Confidence 6 69999 6999999999999999999999999996 6777777543321 1222 3478999 Q ss_pred EEEecCCceEEEEEEEE Q lcl|Aclame:pro 718 TVQPARSIEYIDITFVI 734 (742) Q Consensus 718 ~vaP~~PAEfI~l~f~i 734 (742) .+.|+-.||.|.+++.+ T Consensus 340 ~v~~vdamE~iy~ti~v 356 (356) T protein:vir:10 340 NLKLVDAMEDINIRVQM 356 (356) T ss_pred EEEEEeeeeeEEeEEeC Confidence 99999999999999998 No 50 >protein:vir:80052 Length: 331 # NCBI annotation: gp14 # Family: family:all:396 # MgeID: mge:1876 # MgeName: B054 # Cross-refs: genbank:acc:YP_001468718;genbank:gi:157325298;genbank:GeneID:5601743 Probab=98.47 E-value=5.2e-07 Score=55.02 Aligned_cols=304 Identities=11% Similarity=0.059 Sum_probs=149.1 Q ss_pred eeeccccccccccc-ccceeeeccCCcceeeecccccccccccceeEeecccc----cccccc-eeeeccCCcceEEEec Q lcl|Aclame:pro 388 VISNQPYGFNIQDS-RHSYWLSPFKDDELIIGTELVLPALDVSTEFGVSSWEE----ALPEFS-FLMPFQGGSDGYIRVD 461 (742) Q Consensus 388 vl~~~~~~~~i~~s-~~~~~Ls~l~d~s~~v~td~~a~a~d~s~~v~l~~~~~----~~p~a~-~av~l~gGtdg~i~vd 461 (742) ++ .....+.+... ..+....++.-..++.. .. +.....+..+..... ..+... ....++.+ T Consensus 1 ~~-~~iv~V~v~~~~~~~~~~~~~~~~~~~~~-~t---~~~~~~y~s~~~v~~d~~~~~~~Ykaa~~~f~Q~-------- 67 (331) T protein:vir:80 1 MV-ETITDVRVHISVLYPSPRIGLGRPAIFVK-GT---AMGYKEYTTLEELKDTFADNTEVYAKAKAVFLQK-------- 67 (331) T ss_pred Cc-cceecceeeecccccccccccCcceeEEe-cc---ccceEEEechhhhccCCCCCcHHHHHHHHHHhcc-------- Confidence 11 00000000000 00000000000000000 00 000000000000000 000000 00000000 Q ss_pred CCccccccccccccccccchhhHHHhhc---cCCccEEEEcCCCchHHHHHHHHHHHhhcCceEEEEECCCCCChHHHHH Q lcl|Aclame:pro 462 ENEPDTIGRVKITPALLANYERLLPLLT---EDQFDLVLTPYLTFADHAGTVNAFINRAENRFLYLFDIAGDDDTENLAI 538 (742) Q Consensus 462 ~~~~~~ig~~~~~~~~~a~rtGL~AL~~---~d~v~LL~aPg~t~s~v~aal~Al~a~a~~R~~aI~D~p~~~~t~~~A~ 538 (742) ..+..+... .....+-+.++.. ..-+ .+++.+.+.++.. ++.+.++. ++.++.+.... ....+. T Consensus 68 -~~~~~i~v~-----~~~~~~~~~a~~a~~~~~w~-~~~~~~~~~~~~~-a~a~~~~a-~~~~f~~~~~~----~~~~~~ 134 (331) T protein:vir:80 68 -DRPDTVAVI-----TYEDTKLLEAAEAYFLKSWH-FALLAEFKAADAL-ALSNLIEE-QKFKFAVFQVT----AVADIT 134 (331) T ss_pred -CccceEEEe-----ccchHHHHHHHHHhccCcee-EEEeecCCHHHHH-HHHHHHhh-CCcEEEEEecC----chHHHH Confidence 000000000 0001112233322 1112 2334344444433 34444443 33333333221 111111 Q ss_pred HHHhccCCcEEEEEecceeeccccceeEechHHHHHHHHhhhccCceeecCCcee-eEeee--ccccchhHHhhhcCCce Q lcl|Aclame:pro 539 SLAGYINSSFATTFFPWVRRLTNKGMRTVPASLAAYRSIRTTDPETGLAPVGARR-GVVTG--EPVRQVDWEDLYNNRIN 615 (742) Q Consensus 539 a~r~~~~S~~aaL~~PwVkv~d~~~~~~vPpSgavAGl~ArtD~e~Gv~~SPaN~-~I~~~--~~ls~sE~d~LN~~GIN 615 (742) ...+ ++....++++- .+ --+.++++|.++..|...--| +++ .+.+. ..++..|++.|..+++| T Consensus 135 ~~~~--~~~t~~~~~~~-----~~----~~~~aa~~g~~~~~~~g~~t~---~fk~~l~GV~~~~lt~t~~~al~~~~~N 200 (331) T protein:vir:80 135 PLAK--NTRTIAIVHSK-----TG----EKLDAALIGNVASLPVGSATW---KGRHGLAGITSEELKVSEIDAIQKAGGM 200 (331) T ss_pred Hhhc--cccEEEEEcCC-----cc----chhHHHHHHHHHhcCccceee---eeecccCCCCCCCCCHHHHHHHHhcCce Confidence 1111 23333443331 11 123566677777665422112 222 22333 35788999999999999 Q ss_pred EEEEcCCCEEEEcceecCCCccccceeehhhhhHHHHHHHHHHHHHhhcc----cCCHHHHHHHHHHHHHHHHHHHhCCc Q lcl|Aclame:pro 616 PIVRVGNDVLLFGQKTMLNVNSALNRINVRRLLIVMRNRISQILSSYLFE----NNTSENRLRAEALVRQYLESLRLRGA 691 (742) Q Consensus 616 tI~~fg~G~rlWGnRTlas~D~~wrfInVRR~~d~Ie~sI~~a~~~~VfE----PNd~~l~~~V~~sInafL~~L~~~GA 691 (742) ++.++.+--.++...|+.+ .||.+.+-.+|++..|+..+...+-. |-|..-...|+..++.-|++.+++|. T Consensus 201 ~y~~~~~~~~~~~G~~~~G-----~~iD~~~~~dWl~~~lq~~l~~ll~~~~kiPy~~~G~~~l~a~i~~~~~~av~~G~ 275 (331) T protein:vir:80 201 CYIEKAGIAQTSEGKTVSG-----EFIDSIHGDDWIKATIETRLQKLLTETDKLTFDARGIALLQSELTTVLNEGFANGI 275 (331) T ss_pred EEEEecCeeEEecceEeCc-----hhHHHHHHHHHHHHHHHHHHHHHHHhCCCCccChhhHHHHHHHHHHHHHHHHhCCc Confidence 9988743345566666644 37999999999999999998876543 66888899999999999999999999 Q ss_pred ee--------eEEEEEc--CCCCHHHhhCCEEE-EEEEEEecCCceEEEEEEEEee Q lcl|Aclame:pro 692 VT--------DYEVAID--SVTTPTDIDNNTLR-ARVTVQPARSIEYIDITFVITP 736 (742) Q Consensus 692 L~--------Gf~V~~D--etNtp~dI~~GrL~-i~I~vaP~~PAEfI~l~f~it~ 736 (742) |. ||.|.+. ++.++.|+.++++. +.+.+++...+++|+++..++- T Consensus 276 I~~g~~~~~~~~~v~~~~~~~~s~~dr~~R~~~~~~~~~~~~gaI~~v~i~~~v~~ 331 (331) T protein:vir:80 276 IDSNDETGEPNFSITALQRSDLNDDDIAKRNYKGLSFRYKRSGAIHSVDVYGEVEV 331 (331) T ss_pred eecCccCCCcceEEEeCchhcCCHHHHhccCCCCeEEEEEEcceEEEEEEEEEEeC Confidence 96 6888886 46788999998874 7788899999999999888877 No 51 >protein:vir:5260 Length: 502 # NCBI annotation: hypothetical protein # Family: family:all:396 # MgeID: mge:117 # MgeName: Aaphi23 # Cross-refs: genbank:acc:NP_852765;genbank:gi:31544040;uniprot:Q7Y5T5;genbank:GeneID:2753559 Probab=98.42 E-value=7.3e-07 Score=54.21 Aligned_cols=450 Identities=13% Similarity=0.094 Sum_probs=189.4 Q ss_pred cccccCcccceeeEEEeeeeecccCCceeccceeEEEEEeeccCCCCCccceeeeee--------ecCCCCCeeeecccC Q lcl|Aclame:pro 220 EGIDLNSFNKQFVVSIENITVNREKGQVLYPSFDVVVHFRDIRGVSANTEYIRFRQV--------NLNPESPNYIERVIG 291 (742) Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~ 291 (742) --|.+. .|-|++++..+...--.+|....-|...-...-....-|+|.. ++-.+||+|.-... T Consensus 1 msip~s--------~ivnV~i~~~~~a~~~~~f~~~l~l~~~~~~~~~~~~~r~~~~~s~~~V~~~FG~~s~ey~aA~~- 71 (502) T protein:vir:52 1 MALSIS--------HIVNVQLNTVPKSAARKSFGIVALFTPEAGQAFADEKTRYVYVENQRDVEQLFGTNSETAKAAQP- 71 (502) T ss_pred CCCCcc--------ceeEEeeccccccccccccCceEEEeeccCccccCCccceEEecCHHHHHHhcCCChHHHHHHHH- Confidence 111110 0445555555544444444443333211000000111122221 34556666653321 Q ss_pred ceEEEEcCceEEecccccCCcceEEEEecc-ccccccccch-hhhhhhhhhheec--ccceEEEEEEEEEeeeccccccc Q lcl|Aclame:pro 292 NMTFEFDGERIVTGGEYPNQVPFLRVVVSQ-DIKQNVAGVE-KWVPVGFEGIYSV--GDFTVIVNELTNVSIPVTDSAII 367 (742) Q Consensus 292 ~~~~~~~g~~~vtG~~~~n~~p~L~~si~~-~~~~~~ag~s-~~ip~al~aI~av--g~~tv~v~~itnv~~p~tdsa~v 367 (742) =|++ +--|++.-.-|..-.. +....+.... ..+.+.+..+.++ |.+++.+...........-+... T Consensus 72 --yF~q--------~p~P~~l~igR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~i~i~g~~~t~~~i~lS~~t 141 (502) T protein:vir:52 72 --FFAQ--------SPRAKQLIVARWQKSASTIEATKNTLSGATLSDDLERFKSVVNGRFSLTIGGDVKKVDGLSFARLA 141 (502) T ss_pred --HhcC--------CCccceEEEEeccccccceeechhhhhhhhhHHhHHHhhhhcCceeEEEecceeeeeecccccccc Confidence 1110 0111221000111100 0000000000 1122233333332 33333322111000000000000 Q ss_pred cc-hhhheeeeeccc-ccceeeeeecccccccccccccceeeeccCCcceeeecccccccccccceeEeecccc---ccc Q lcl|Aclame:pro 368 PP-MRFTRIEQITLS-GGASFSVISNQPYGFNIQDSRHSYWLSPFKDDELIIGTELVLPALDVSTEFGVSSWEE---ALP 442 (742) Q Consensus 368 p~-~~~~li~~~~l~-~ga~~~vl~~~~~~~~i~~s~~~~~Ls~l~d~s~~v~td~~a~a~d~s~~v~l~~~~~---~~p 442 (742) .- .....++. .+. .+..+.+.-+.. ......+...+ .....+....... ... T Consensus 142 s~~~vA~~i~~-~l~~~~~~~tv~~d~~-------------------~~~F~i~s~tt---g~~~~~~~~~a~~~~~~gt 198 (502) T protein:vir:52 142 DFNAVATKIQE-KLTTLSVAVSIAYDET-------------------GNRFIVSANVA---GEDKKTEIDYAIDEGGEGE 198 (502) T ss_pred chhHHHHHHHh-hhcccccceEEEEecC-------------------CceEEEEeccC---CCcceeEEEEeecCCcchh Confidence 00 00000000 000 000000000000 00000000000 0000000000000 000 Q ss_pred ccceeeeccCCcceEEEecCCccccccccccccccccchhhHHHhhccC-Cc-cEEEEcCCCchHHHHHHHHHHHhhcCc Q lcl|Aclame:pro 443 EFSFLMPFQGGSDGYIRVDENEPDTIGRVKITPALLANYERLLPLLTED-QF-DLVLTPYLTFADHAGTVNAFINRAENR 520 (742) Q Consensus 443 ~a~~av~l~gGtdg~i~vd~~~~~~ig~~~~~~~~~a~rtGL~AL~~~d-~v-~LL~aPg~t~s~v~aal~Al~a~a~~R 520 (742) .......++.+ .+... .+..........--+.|.++.... +. .++++-..++++ ..++.++++..+++ T Consensus 199 ~~a~~l~l~~~-~~av~--------v~~~~~g~~aet~~~al~a~~~~~~~w~~~~~a~~~~~~~-~la~a~~iea~~~~ 268 (502) T protein:vir:52 199 YIGALLKLENG-QASRK--------VGKNSVSLKKETLGEALFNVAEVNNTWYGFTVAAQLTDSE-VEAAAKYAQANTKL 268 (502) T ss_pred HHHHHhccccc-cceee--------eeeecccccccCHHHHHHHHHhccCceEEEEEeecCChhH-HHHHHHHHhhcCcE Confidence 00000011100 00000 000000000111223455554432 22 234443333333 33455555543333 Q ss_pred eEEEEECCCC--CChHHHHHHHHhccCCcEEEEEecceeeccccceeEechHHHHHHHHhhhccC--ce-eecCCceeeE Q lcl|Aclame:pro 521 FLYLFDIAGD--DDTENLAISLAGYINSSFATTFFPWVRRLTNKGMRTVPASLAAYRSIRTTDPE--TG-LAPVGARRGV 595 (742) Q Consensus 521 ~~aI~D~p~~--~~t~~~A~a~r~~~~S~~aaL~~PwVkv~d~~~~~~vPpSgavAGl~ArtD~e--~G-v~~SPaN~~I 595 (742) +......... ....+.+.... ..+..|..+.|-. + . ..+.+++.|..+.+|-. .| ..+.-...+- T Consensus 269 f~~~~~d~~~~~~~~~~i~~~l~-a~~~~~t~~~y~~----~--~---~~~~aa~~g~~as~~f~~~~g~iT~~fk~l~G 338 (502) T protein:vir:52 269 FGANVIRAEQIEWSADNIYKKLY-DAGLDHTLAMFDK----N--D---MYPVSSALARLLSTNFAANNSTLTLKFKQQPT 338 (502) T ss_pred EEEEecCcceeccccchHHHHHH-hccCceeEEEecC----C--c---chhHHHHHHHHHhcCCCcCcceeeecccccCC Confidence 3321111110 11122222222 2333444444321 1 0 12566677888877643 22 1122222222 Q ss_pred eeeccccchhHHhhhcCCceEEEEcCCCEEEEcceecCCCccccceeehhhhhHHHHHHHHHHHHHhhcc-----cCCHH Q lcl|Aclame:pro 596 VTGEPVRQVDWEDLYNNRINPIVRVGNDVLLFGQKTMLNVNSALNRINVRRLLIVMRNRISQILSSYLFE-----NNTSE 670 (742) Q Consensus 596 ~~~~~ls~sE~d~LN~~GINtI~~fg~G~rlWGnRTlas~D~~wrfInVRR~~d~Ie~sI~~a~~~~VfE-----PNd~~ 670 (742) +....++..|.+.|..+++|++.++.+-..+...+++.+ .||-+.+-.+|++..|+..+...++. |-|.. T Consensus 339 V~~~~lt~t~~~al~~~~~N~y~~~~~~~~~~~G~~~~G-----~~iD~~~~~~Wl~~~lq~~l~~~L~~s~~kIPy~~~ 413 (502) T protein:vir:52 339 ITADEITATEFAKAKRLGINVYTYFDDVAMIAEGTVIGG-----KFADEIVILDWFVDAVQKEVFARLYKSPTKIPLTDK 413 (502) T ss_pred cccCcCCHHHHHHHHhcCceEEEEecCeeEEecCeeeCC-----chhhHHHHHHHHHHHHHHHHHHHHHhcCCCcccChh Confidence 233457889999999999999988743234566676644 37889999999999999998765542 67888 Q ss_pred HHHHHHHHHHHHHHHHHhCCcee--------------------eEEEEEc--CCCCHHHhhCCEE-EEEEEEEecCCceE Q lcl|Aclame:pro 671 NRLRAEALVRQYLESLRLRGAVT--------------------DYEVAID--SVTTPTDIDNNTL-RARVTVQPARSIEY 727 (742) Q Consensus 671 l~~~V~~sInafL~~L~~~GAL~--------------------Gf~V~~D--etNtp~dI~~GrL-~i~I~vaP~~PAEf 727 (742) -...|+..|+.-|++-+++|.|. ||.|.+. ++.++.|..++++ -+.+.+++...+++ T Consensus 414 G~~~l~a~i~~~l~~a~~~G~I~~G~~~~~~~g~~~~~d~~~~gy~v~~~~~~~~s~~dr~~R~~~~~~~~~~~aGaIh~ 493 (502) T protein:vir:52 414 GQAILIAAVEKVCLEGINNGAFAPGKWTGAGFGNLSTGDYLDKGFYVWAAPMDTLSDSDRQARRATPIQTAVKLAGAIHS 493 (502) T ss_pred HHHHHHHHHHHHHHHHHhcCccccccccCcccceeeecccccCceEEEeCchhhCCHHHHHcccCCCeEEEEEECceEEE Confidence 99999999999999999999984 5788776 4688899988887 88999999999999 Q ss_pred EEEEEEEee Q lcl|Aclame:pro 728 IDITFVITP 736 (742) Q Consensus 728 I~l~f~it~ 736 (742) |++.+.+-| T Consensus 494 v~i~~nv~~ 502 (502) T protein:vir:52 494 SDVIVNYNR 502 (502) T ss_pred EEEEEEEeC Confidence 999999999 No 52 >protein:vir:95263 Length: 450 # NCBI annotation: Phage conserved protein # Family: family:all:396 # MgeID: mge:1561 # MgeName: Felix 01 # Cross-refs: genbank:acc:NP_944896;genbank:gi:38707836;genbank:GeneID:2744049 Probab=98.34 E-value=1.2e-06 Score=53.10 Aligned_cols=391 Identities=11% Similarity=0.032 Sum_probs=146.2 Q ss_pred CCcceEEEEeccccccccccchhhhhhhhhhheecccceEEEEEEEEEeeecc-ccccccc-hhhheeeeecccccceee Q lcl|Aclame:pro 310 NQVPFLRVVVSQDIKQNVAGVEKWVPVGFEGIYSVGDFTVIVNELTNVSIPVT-DSAIIPP-MRFTRIEQITLSGGASFS 387 (742) Q Consensus 310 n~~p~L~~si~~~~~~~~ag~s~~ip~al~aI~avg~~tv~v~~itnv~~p~t-dsa~vp~-~~~~li~~~~l~~ga~~~ 387 (742) -+..-+.+.+.-. ...+ .+..|....-.|.-.+...++........ ...+... .++.....+--....--. T Consensus 1 ~~s~iVnV~i~~~--~~a~-----~~~~f~~~l~~~~~~~~~~r~~~yss~~~V~~~FG~~S~ey~aA~~yF~q~p~p~~ 73 (450) T protein:vir:95 1 MWNPIVNVDITLN--TAGT-----TREGFGLPLFLASTDNFEERVRGYTSLTEVAEDFDENTAAYKAAKQLWSQTPKVTQ 73 (450) T ss_pred CCCceEEEeeccc--cccc-----ccccceeEEEEcCCCCCccceeeecCHHHHHHhcCCCcHHHHHHHHHHhCCCcccE Confidence 1111122222210 0000 00111111101110000000000000000 0000000 000000000000000000 Q ss_pred eee----ccccccccc--ccccceeeeccCCcceeeecccccccccccceeEeecccccccccc-eeeeccC-------- Q lcl|Aclame:pro 388 VIS----NQPYGFNIQ--DSRHSYWLSPFKDDELIIGTELVLPALDVSTEFGVSSWEEALPEFS-FLMPFQG-------- 452 (742) Q Consensus 388 vl~----~~~~~~~i~--~s~~~~~Ls~l~d~s~~v~td~~a~a~d~s~~v~l~~~~~~~p~a~-~av~l~g-------- 452 (742) +.. .+....... .......++.--+ ........+.+.........+. ....+.+ T Consensus 74 l~igr~~~~~t~~~~~~~~~~~~g~lt~tv~-----------G~~~~~~~i~~s~a~s~~~va~~~~tai~~~~~~~~~~ 142 (450) T protein:vir:95 74 LYIGRRAMQYTVSIPDAVTESTDYSITVAAG-----------GGISQPYQYTAQSSDTAENVLQQFKTQIEADPTIKDKV 142 (450) T ss_pred EEEEeeccchhhhhhhhhccccceeEEEEec-----------ceeeeeeEEEEEecCChhhHHHHhhhhhcccceeeeee Confidence 000 000000000 0000000000000 0000000000000000000000 0000000 Q ss_pred -----CcceE--EEecCCcccc-------cccccccc-ccccchhhHHHhhcc-CCccEEEEcCCCchHHHHHHHHHHHh Q lcl|Aclame:pro 453 -----GSDGY--IRVDENEPDT-------IGRVKITP-ALLANYERLLPLLTE-DQFDLVLTPYLTFADHAGTVNAFINR 516 (742) Q Consensus 453 -----Gtdg~--i~vd~~~~~~-------ig~~~~~~-~~~a~rtGL~AL~~~-d~v~LL~aPg~t~s~v~aal~Al~a~ 516 (742) |.+.. +......... .+.....+ ....-.+.+.++... .+.-.++.+..++++. .++.++++. T Consensus 143 ~~~s~g~~~~~t~~~~~~~~~~~~~l~~~~~~~~~~g~~aet~~~a~~a~~~~~~~w~~~~~~~~~~~~i-~a~a~w~~a 221 (450) T protein:vir:95 143 SVNVTGSNGSATMIIAKAGDNDFVKVTTTAQTVYIASTTADTASTALAAIEAYSTDWYFIAAEDRTQQFV-LAMASEIQA 221 (450) T ss_pred eeeeecccceeeeeeeccccchhhccccccceeEecccccccHHHHHHHHHHhhCCeEEEEecCCCHHHH-HHHHHHHhh Confidence 00000 0000000000 00000000 000001122222211 1111223333222222 122222222 Q ss_pred hcCceEEEEECCCC-CCh------HHHHHHHHhccCCcEEE-EEecceeeccccceeEechHHHHHHHHhhhccCceeec Q lcl|Aclame:pro 517 AENRFLYLFDIAGD-DDT------ENLAISLAGYINSSFAT-TFFPWVRRLTNKGMRTVPASLAAYRSIRTTDPETGLAP 588 (742) Q Consensus 517 a~~R~~aI~D~p~~-~~t------~~~A~a~r~~~~S~~aa-L~~PwVkv~d~~~~~~vPpSgavAGl~ArtD~e~Gv~~ 588 (742) +++++........ ... .+.+.... ..+..|.. +|++- ...-.+.++++|.....+..+ +.+ T Consensus 222 -~~~~f~~~~~~~~~~~~~~~~~~~~i~~~l~-~~~~~~t~~~y~~~--------~~~~~~~aa~~g~~~~~~~g~-~T~ 290 (450) T protein:vir:95 222 -RKKIFFTANSDVTALQGTELASANDVPAQLA-KNMYTRTVCLWHHA--------AAEDYPEMAYIAYGAPYDAGS-IAW 290 (450) T ss_pred -cCcEEEEEcCCchhhhhhhhhcccchHHHHH-hccCCeeEEEeeCC--------CchhHHHHHHHHHhhhcccce-eee Confidence 1221111110000 000 00000111 11111221 11110 001124556666654443221 111 Q ss_pred CCceeeEeee---------ccccchhHHhhhcCCceEEEEcCCCEEEEcceecCCCccccceeehhhhhHHHHHHHHHHH Q lcl|Aclame:pro 589 VGARRGVVTG---------EPVRQVDWEDLYNNRINPIVRVGNDVLLFGQKTMLNVNSALNRINVRRLLIVMRNRISQIL 659 (742) Q Consensus 589 SPaN~~I~~~---------~~ls~sE~d~LN~~GINtI~~fg~G~rlWGnRTlas~D~~wrfInVRR~~d~Ie~sI~~a~ 659 (742) . ++.+.+. ..++..|.+.|..+++|++.++.+=-.++..+|+.+ .||-++|-.+|++..|+..+ T Consensus 291 ~--fk~l~Gv~~~v~~~~~~~lt~~~~~al~~~~~n~y~~~~~~~~~~~G~~~~G-----~~iD~~~~~~wl~~~iq~~l 363 (450) T protein:vir:95 291 G--NAQLTGVAASLQPSNQRPLTSIQKSALDVRHCNFIDLDGGVPVVRRGITSGG-----EWIDIIRGVDWLESDLKTSL 363 (450) T ss_pred c--cccccceeeeccCccccccchHHHHHHHhCCcEEEEEecCceeeeCCeeeCc-----chhHHHHHHHHHHHHHHHHH Confidence 1 2222222 347789999999999999988743345777787744 37889999999999999998 Q ss_pred HHhh-----cc-cCCHHHHHHHHHHHHHHHHHHHhCCceeeEEEEEc--CCCCHHHhhCCEE-EEEEEEEecCCceEEEE Q lcl|Aclame:pro 660 SSYL-----FE-NNTSENRLRAEALVRQYLESLRLRGAVTDYEVAID--SVTTPTDIDNNTL-RARVTVQPARSIEYIDI 730 (742) Q Consensus 660 ~~~V-----fE-PNd~~l~~~V~~sInafL~~L~~~GAL~Gf~V~~D--etNtp~dI~~GrL-~i~I~vaP~~PAEfI~l 730 (742) .... .+ |-|..-...|+..|+.-|++..++|.|.||+|.+. ++.++.|+.++++ -+.+.+.....++.+.+ T Consensus 364 ~~ll~~~~~~KiPy~~~G~~~i~a~i~~~l~~a~~~G~Ia~~~V~~~~~~~~~~~dr~~R~~~~i~~~~~laGAIh~~~i 443 (450) T protein:vir:95 364 RDLLINQKGGKITYDDTGITRIRQVIETSLQRAVNRNFLSSYTVNVPKASQVALADKKARILKDVTFAGILAGAILDVDL 443 (450) T ss_pred HHHHHhcCCCCCccChhhHHHHHHHHHHHHHHHHhcCcccceeEecCChHhcCHHHHhccCCCCeeEEEEEccceEEEEE Confidence 8765 12 77888899999999999999999999999999886 4577888888776 37778888999999999 Q ss_pred EEEEeec Q lcl|Aclame:pro 731 TFVITPT 737 (742) Q Consensus 731 ~f~it~t 737 (742) +..++=. T Consensus 444 ~~~v~~~ 450 (450) T protein:vir:95 444 KGTVAYE 450 (450) T ss_pred EEEEEeC Confidence 9988866 No 53 >protein:vir:78782 Length: 370 # NCBI annotation: putative tail sheath protein # Family: family:all:669 # MgeID: mge:1857 # MgeName: phiO18P # Cross-refs: genbank:acc:YP_001285652;genbank:gi:148727158;genbank:GeneID:5220132 Probab=98.33 E-value=1.3e-06 Score=52.82 Aligned_cols=333 Identities=12% Similarity=0.025 Sum_probs=157.4 Q ss_pred ecccceEEEEEEEEEeeeccccccccchhhheeeeecccccceeeeeecccccccccccccce--eeeccCCcceeeecc Q lcl|Aclame:pro 343 SVGDFTVIVNELTNVSIPVTDSAIIPPMRFTRIEQITLSGGASFSVISNQPYGFNIQDSRHSY--WLSPFKDDELIIGTE 420 (742) Q Consensus 343 avg~~tv~v~~itnv~~p~tdsa~vp~~~~~li~~~~l~~ga~~~vl~~~~~~~~i~~s~~~~--~Ls~l~d~s~~v~td 420 (742) .+ .+|.+|.+ |.. +-.+ ..-+..-++..... ..... .++...|...+.+ T Consensus 1 ~~--~~v~vn~~-n~~-----~g~~-------------~~~er~~lfig~~~------~~~g~~~~~~~~sdld~~l~-- 51 (370) T protein:vir:78 1 MW--PYVQIYNL-NQM-----QGPV-------------TEVERHLLFIGSAA------SNTGKLLSLNAQSDFDQLLG-- 51 (370) T ss_pred CC--ceEEEeec-ccc-----CCCc-------------CccceeEEEEeccc------ccccceEeecCccCHHHhcC-- Confidence 11 11111111 000 0000 00011111111000 00000 0111111100000 Q ss_pred cccccccccceeEeecccccccccceeeeccCCcceEEEecCCccccccccccccccccchhhHHHhhccCCccEEEEcC Q lcl|Aclame:pro 421 LVLPALDVSTEFGVSSWEEALPEFSFLMPFQGGSDGYIRVDENEPDTIGRVKITPALLANYERLLPLLTEDQFDLVLTPY 500 (742) Q Consensus 421 ~~a~a~d~s~~v~l~~~~~~~p~a~~av~l~gGtdg~i~vd~~~~~~ig~~~~~~~~~a~rtGL~AL~~~d~v~LL~aPg 500 (742) ..+..++.-..+..+.+|..-...+.+... ..+. -..++.......+..+.+-+ T Consensus 52 ---------------~~ds~lk~~v~aa~~naG~~~~~~~~p~~~-------~~d~----~~Av~~a~~~~s~E~V~v~~ 105 (370) T protein:vir:78 52 ---------------AADSELKANLLAARDNAGQNWSAAAYVLPT-------DKPW----LDAARDAQQTQSFEGVVVLG 105 (370) T ss_pred ---------------CcChhHHHHHHHHHhCCCCceEEEEEEecC-------chhH----HHHHHHHHhhCCccEEEEec Confidence 011111111112223334333222211100 0000 11222222223344555555 Q ss_pred C-CchHHHHHHHHHHHhhc----CceEEEEECCCCCCh------HHHHHHHHhccCCcEEEEEecceeeccccceeEech Q lcl|Aclame:pro 501 L-TFADHAGTVNAFINRAE----NRFLYLFDIAGDDDT------ENLAISLAGYINSSFATTFFPWVRRLTNKGMRTVPA 569 (742) Q Consensus 501 ~-t~s~v~aal~Al~a~a~----~R~~aI~D~p~~~~t------~~~A~a~r~~~~S~~aaL~~PwVkv~d~~~~~~vPp 569 (742) . ++...+.++.++.+.+. ...++++..+...+. .....+.++.+.+.+..++--|-. -. T Consensus 106 ~~s~~a~~~a~~~~a~el~n~~~Rpv~file~~~~~~~e~w~~y~~~l~al~~gia~~~V~vvp~~~g----------~~ 175 (370) T protein:vir:78 106 QEWHQAAINAAHALNQELIAKWGRWQFMLLAVPAIADEQDWATYEAELATLQDGIAASSVSLIPQLWP----------TL 175 (370) T ss_pred CcchHHHHHHHHHHHHHHHHhcCCeEEEEEeecCCCCcCCHHHHHHHHHHhhhccccccceEEeeecc----------cc Confidence 4 45555555555554432 234556655443322 223445567788888777643321 11 Q ss_pred HHHHHHHHhhhccCceeecCCcee------eE-----e-eeccccchhHHhhhcCCceEEEEcC--CCEEEEcceecCCC Q lcl|Aclame:pro 570 SLAAYRSIRTTDPETGLAPVGARR------GV-----V-TGEPVRQVDWEDLYNNRINPIVRVG--NDVLLFGQKTMLNV 635 (742) Q Consensus 570 SgavAGl~ArtD~e~Gv~~SPaN~------~I-----~-~~~~ls~sE~d~LN~~GINtI~~fg--~G~rlWGnRTlas~ 635 (742) -|.+||..|... --+.-+|..+ ++ . ...+++.+.++.|..+|-.+.+.+. .|+.+-..|||+.. T Consensus 176 ~G~~aGRL~naa--vsVadsP~Rv~tG~l~gl~~~p~d~~~~~l~~a~l~aLd~agy~vp~~Y~gy~G~Y~~d~~tl~~~ 253 (370) T protein:vir:78 176 AGAYAGRLCNRA--VSIADSPCRVKTGALVGLGNKPVGKDGIPLPLATLQTLEANRYSVPMWYPDYDGIYWADGRTLDAE 253 (370) T ss_pred HHHHHHHHhcCe--eeecccceeeeccccccccccccccCCcccCHHHHHHHHhCCCeEEEeeCCCCceEEeCceEeccC Confidence 377788655321 1123344322 11 0 1123566788999999999999873 37776667999877 Q ss_pred ccccceeehhhhhHHHHHHHHHHHHH-hhcccC--CHHHHHHHHHHHHHHHHHHHhCCceee--EEEEEc----CCCCHH Q lcl|Aclame:pro 636 NSALNRINVRRLLIVMRNRISQILSS-YLFENN--TSENRLRAEALVRQYLESLRLRGAVTD--YEVAID----SVTTPT 706 (742) Q Consensus 636 D~~wrfInVRR~~d~Ie~sI~~a~~~-~VfEPN--d~~l~~~V~~sInafL~~L~~~GAL~G--f~V~~D----etNtp~ 706 (742) .+++++|..+|+.|-+.|.++..+-. ..++-. ++......+.-...=|+++...+.+.| |.-.+. .+-+.. T Consensus 254 gsDYq~ie~~RVvdKa~R~vR~~ai~~i~D~~lnst~gsia~~~~~~~~~L~ema~s~~i~~~~fpgeI~~p~d~Di~i~ 333 (370) T protein:vir:78 254 GGDYQVIENLRIAYKVARRMRLRAIARIGDRSFNSTPGSTAAAITYFGKDLREMAKSTTINGQPFPGDIASPQDGDIRIQ 333 (370) T ss_pred CCChhhhhhhhHHHHHHHHHHHHHHHHhCCcccCCCCcchhHHHHHHHhhHHHHHhhhhhcccccceeEeccCCCcceEE Confidence 88999999999999999999955544 444322 222334445555566777777888777 322332 222333 Q ss_pred HhhCCEEEEEEEEEecCCceEEEEEEEEeeceeecC Q lcl|Aclame:pro 707 DIDNNTLRARVTVQPARSIEYIDITFVITPTGVEIT 742 (742) Q Consensus 707 dI~~GrL~i~I~vaP~~PAEfI~l~f~it~tG~~fs 742 (742) -+...++.+.+.+.|.--...|+..+.+.-..-+=- T Consensus 334 w~s~~~v~I~~~v~P~~~pk~Itv~I~LDls~e~~~ 369 (370) T protein:vir:78 334 WVAKNLVSVFVVVRTVDCPKGITVNIMLDLSLNNGE 369 (370) T ss_pred eeccceEEEEEEEEeccCCceEEEEEEEeeccccCC Confidence 457788999999999998999998886532110000 No 54 >protein:vir:3751 Length: 376 # NCBI annotation: orf23 # Family: family:all:669 # MgeID: mge:79 # MgeName: HP1 # Cross-refs: genbank:acc:NP_043492;genbank:gi:9628627;genbank:GeneID:1261129 Probab=98.16 E-value=3.3e-06 Score=50.61 Aligned_cols=314 Identities=9% Similarity=0.047 Sum_probs=160.9 Q ss_pred cccceeeec---cC------Cccee-eecccccccccccceeEeecccc----------cccccceeeeccCCcceEEEe Q lcl|Aclame:pro 401 SRHSYWLSP---FK------DDELI-IGTELVLPALDVSTEFGVSSWEE----------ALPEFSFLMPFQGGSDGYIRV 460 (742) Q Consensus 401 s~~~~~Ls~---l~------d~s~~-v~td~~a~a~d~s~~v~l~~~~~----------~~p~a~~av~l~gGtdg~i~v 460 (742) -.....+++ .+ +..++ ++.. ..+....+.+...+. .++.-..+..+.+|..-...+ T Consensus 1 ~~~~v~vn~ln~~qg~~~~ver~~lfig~~----~~~~~~~~~~~~~sdld~~lg~~ds~lk~~v~aa~~naG~~w~a~~ 76 (376) T protein:vir:37 1 MFPSVQINALNQLSGETKEIERHALFVGVG----TTNQGKLLALTPDSDFDKVFGETDTDLKKQVRAAMLNAGQNWFAHV 76 (376) T ss_pred CCCeEEEeeeeccCCCcccccceEEEeecc----ccccCceEEecCCCChHHhhCCCchhHHHHHHHHHhCCCCceEEEE Confidence 111111221 11 11111 1111 011111111111111 011001111122222211111 Q ss_pred cCCccccccccccccccccchhhHHHhhccCCccEEEEcCC--CchHHHHHHHHHHHhh----cCceEEEEECCCCC--- Q lcl|Aclame:pro 461 DENEPDTIGRVKITPALLANYERLLPLLTEDQFDLVLTPYL--TFADHAGTVNAFINRA----ENRFLYLFDIAGDD--- 531 (742) Q Consensus 461 d~~~~~~ig~~~~~~~~~a~rtGL~AL~~~d~v~LL~aPg~--t~s~v~aal~Al~a~a----~~R~~aI~D~p~~~--- 531 (742) -.. .. ... .--..++.......+..+.+-|. ++...+.++.++.+.+ ....++++..++-. T Consensus 77 ~~p--~~----~~~----~~~~Av~~a~~~~s~E~V~v~~p~~t~~a~i~a~qa~a~el~~~~~R~vffile~~g~d~~~ 146 (376) T protein:vir:37 77 YIA--QE----DGY----DFVECVKKANQTASFEYCVNTRYLGVDKASIGKLQECYAELLAKFGRRTFFIQAVQGINHDQ 146 (376) T ss_pred Eec--CC----Chh----hHHHHHHHHHhhCCeeEEEEecCcchhHHHHHHHHHHHHHHHHhcCCeEEEEEeccCCCCcc Confidence 000 00 000 01112333323334445555453 2344444444443332 23455666665311 Q ss_pred -Ch------HHHHHHHHhccCCcEEEEEecceeeccccceeEechHHHHHHHHhhhccCceeecCCcee------eEeee Q lcl|Aclame:pro 532 -DT------ENLAISLAGYINSSFATTFFPWVRRLTNKGMRTVPASLAAYRSIRTTDPETGLAPVGARR------GVVTG 598 (742) Q Consensus 532 -~t------~~~A~a~r~~~~S~~aaL~~PwVkv~d~~~~~~vPpSgavAGl~ArtD~e~Gv~~SPaN~------~I~~~ 598 (742) +. .....+.++.+.+.+..++-. +.. -..|.+||.+|+.. .-++.||... ++... T Consensus 147 ~~ge~w~~y~~~l~a~~~gia~~~V~vV~~-~~g---------n~~G~~aGRl~naa--VsVadspgRV~tGai~gl~~~ 214 (376) T protein:vir:37 147 SDGETWDQYVQKLTTLQQTIVADHVCLVPL-LFG---------NETGVLAGRLANRA--VTVADSPARVQTGALVSLGSA 214 (376) T ss_pred cccCCHHHHHHHHHHHhccccccceeeeee-ecc---------chHHHHHHHHHhCC--cchhcCccceeeccccccccc Confidence 11 123345566788888777632 111 13688899887431 1123344332 11111 Q ss_pred --------ccccchhHHhhhcCCceEEEEcC--CCEEEEcceecCCCccccceeehhhhhHHHHHHHHHHHHHhhccc-- Q lcl|Aclame:pro 599 --------EPVRQVDWEDLYNNRINPIVRVG--NDVLLFGQKTMLNVNSALNRINVRRLLIVMRNRISQILSSYLFEN-- 666 (742) Q Consensus 599 --------~~ls~sE~d~LN~~GINtI~~fg--~G~rlWGnRTlas~D~~wrfInVRR~~d~Ie~sI~~a~~~~VfEP-- 666 (742) .++..+..+.|..+|-.+.+.+. .|+..-+.||++...+++++|..+|++|-+.|.++..+-..+..+ T Consensus 215 ~~p~d~~g~el~~a~l~aLd~arysvpr~Y~gydG~Yw~dg~tl~~~gsDYq~ie~~RVvdKa~R~vR~~Ai~~i~Dr~l 294 (376) T protein:vir:37 215 NKPLDKDGNELTLAHLKSLETARYSVPMWYPDYDGYYRADGRTLDVEGGDYQVIENLRVVDKVARKVRLLAIGKIADRSF 294 (376) T ss_pred ccccccCCcccchHHHHHHHhCCCeEEEeeCCCCceEEeCCeEeccCCCCeeeehhchHHHHHHHHHHHHHHHHhcCccc Confidence 12445677889999999998874 377766779998888899999999999999998887777665542 Q ss_pred -CCHHHHHHHHHHHHHHHHHHHhCCceeeEE----EEEc--CCCCHHHhhCCEEEEEEEEEecCCceEEEEEEEEeec-e Q lcl|Aclame:pro 667 -NTSENRLRAEALVRQYLESLRLRGAVTDYE----VAID--SVTTPTDIDNNTLRARVTVQPARSIEYIDITFVITPT-G 738 (742) Q Consensus 667 -Nd~~l~~~V~~sInafL~~L~~~GAL~Gf~----V~~D--etNtp~dI~~GrL~i~I~vaP~~PAEfI~l~f~it~t-G 738 (742) .++.-.+..+..+..=||.|.+++-|.|.. |... .+-+-.-....++.+.+.+.|.--...|+..+.+.-+ - T Consensus 295 nstp~sia~~~~~~~~pLr~M~ks~ei~g~~fpgei~~P~d~dI~i~w~sk~~V~I~~~vrPy~cpk~i~~~I~LDls~~ 374 (376) T protein:vir:37 295 NSTTSSTEYHKNYFAKPLRDMSKSATINGKDFPGECMPPKDDAITIVWQSKTKVTIYIKVRPYDCPKEITANIFLDLDSL 374 (376) T ss_pred cCChhHHHHHHHHHhHHHHHHHhhhhhccccccceeecCCCCceEEEeccCceEEEEEEEeeecCcceeEEEEEEecCCC Confidence 367778888999999999999999999843 4331 2221111235678888899999878888887765322 1 Q ss_pred ee Q lcl|Aclame:pro 739 VE 740 (742) Q Consensus 739 ~~ 740 (742) .| T Consensus 375 ~~ 376 (376) T protein:vir:37 375 GE 376 (376) T ss_pred CC Confidence 12 No 55 >protein:vir:489 Length: 498 # NCBI annotation: putative sheath protein # Family: family:all:369 # MgeID: mge:11 # MgeName: P27 # Cross-refs: genbank:acc:NP_543096;swissprot:trembl:q8w623;genbank:gi:18249908;uniprot:Q8W623;genbank:GeneID:929698 Probab=98.16 E-value=3.4e-06 Score=50.54 Aligned_cols=432 Identities=10% Similarity=0.036 Sum_probs=185.3 Q ss_pred eeeeecccCCceeccceeEEEEEeeccCCCCCccceeeeeeecCCCCCeeeecccCceEEEEcCceEEecccccCCcceE Q lcl|Aclame:pro 236 ENITVNREKGQVLYPSFDVVVHFRDIRGVSANTEYIRFRQVNLNPESPNYIERVIGNMTFEFDGERIVTGGEYPNQVPFL 315 (742) Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vtG~~~~n~~p~L 315 (742) -+|..|.-|.-..-| --|+.|.+-.-+...|.+- +.-=|++..+|+..+|. |.. T Consensus 1 M~IsF~~IP~~iRvP-----------------~~y~E~dns~A~~~~~~qr--------vLiiGq~la~gt~~~~~-~v~ 54 (498) T protein:vir:48 1 MTISFSAVPSDTLVP-----------------LFYAEMDNSAANTAVTSAP--------ALLIGHASNDAAIEVNS-LVL 54 (498) T ss_pred CCccccccCcccccc-----------------eEEEEEecCCCccccCCcc--------eEEEeecCccccccccc-eEE Confidence 222223333222211 1244444433344433322 33334555556666664 456 Q ss_pred EEEeccccccccccchhh-hhhhhhhheecccceEEEEEEEEEeeeccccccccchhhheeeeecccccceeeeeecccc Q lcl|Aclame:pro 316 RVVVSQDIKQNVAGVEKW-VPVGFEGIYSVGDFTVIVNELTNVSIPVTDSAIIPPMRFTRIEQITLSGGASFSVISNQPY 394 (742) Q Consensus 316 ~~si~~~~~~~~ag~s~~-ip~al~aI~avg~~tv~v~~itnv~~p~tdsa~vp~~~~~li~~~~l~~ga~~~vl~~~~~ 394 (742) .+|..+....+|.|.-.. .-.+.......+.- +.....+..+..-.+ ..+...... ..|....-++++.. T Consensus 55 v~s~~~a~~~fG~GS~l~~M~~a~~~~n~~~~l-------~~i~~~D~ag~aA~g-~it~tg~at-~~G~l~l~Igg~~v 125 (498) T protein:vir:48 55 MPSADYARQICGAGSQLARMVDVYRQTDPFGEL-------YVIAVPEARGAAATV-RVTVTGEAE-ESGTLSLYVGRSSV 125 (498) T ss_pred ecCHHHHHHhcCcccHHHHHHHHHHHhCCCcee-------EEEeeCCcccceeEE-EEEeccccc-CCceEEEEECCEEE Confidence 667777777777765422 11122222112211 111111111100000 000000000 11111111111111 Q ss_pred ccccc--ccccc---eeeeccCCcceeeecccccccccccceeEeecccccccccceeeeccCCcceEEEecC-----Cc Q lcl|Aclame:pro 395 GFNIQ--DSRHS---YWLSPFKDDELIIGTELVLPALDVSTEFGVSSWEEALPEFSFLMPFQGGSDGYIRVDE-----NE 464 (742) Q Consensus 395 ~~~i~--~s~~~---~~Ls~l~d~s~~v~td~~a~a~d~s~~v~l~~~~~~~p~a~~av~l~gGtdg~i~vd~-----~~ 464 (742) ...+. ++... ...........+..+. ......++++.- -.-.-|++...++.. .+ T Consensus 126 ~v~V~~gdTaa~vA~al~aai~a~~~lPVTA-----~~~~~~VtlTAr----------~kG~~GN~I~l~~~~~~~~~ge 190 (498) T protein:vir:48 126 QVPVVNGDDATAVATAIKEAVNGVITLPFAA-----SSDAGVVTLTAR----------HKGLYGNELPVCLNYYGSGGGE 190 (498) T ss_pred EEeecCCCCHHHHHHHHHHHHhCCCCcceEE-----EecCcEEEEEee----------ecccccccceeeeeeccCcccc Confidence 11000 00000 0000000000000000 000111111110 000011121111110 00 Q ss_pred cccccc-----cccccccccchhhHHHhhccCCccEEEEcCCCchHHHHHHHHHHHh-------hcCceEEEEECCCCCC Q lcl|Aclame:pro 465 PDTIGR-----VKITPALLANYERLLPLLTEDQFDLVLTPYLTFADHAGTVNAFINR-------AENRFLYLFDIAGDDD 532 (742) Q Consensus 465 ~~~ig~-----~~~~~~~~a~rtGL~AL~~~d~v~LL~aPg~t~s~v~aal~Al~a~-------a~~R~~aI~D~p~~~~ 532 (742) ....|. ....+..+-+.....+......++++++|.. ++....++.+++.. ++.|......+..+ T Consensus 191 ~~p~Glt~~itamsgGag~PDia~aLaal~~~~~~~I~~p~~-D~asl~al~~~L~~~sgRw~~~~q~~g~~~~a~~g-- 267 (498) T protein:vir:48 191 ILPAGLQVVTEAGTAGSGAPDLTAAVAAMGDEAFDFIGLPFN-DAASINMMMTEMNDSSGRWSYARQLYGHVYTAKLG-- 267 (498) T ss_pred cccceeeEEEEcccCCccCcchHHHHHhhccCCccEEEEeec-CHHHHHHHHHHHhhhhhhhhHHhhcCeEEEEeccC-- Confidence 000000 0111111123333333344456788999864 55555566677643 34444433334333 Q ss_pred hHHHHHHHHhccCCcEEEEEecceeeccccceeEechH---HHHHHHHh---hhccCceeecCCce-eeEeeec------ Q lcl|Aclame:pro 533 TENLAISLAGYINSSFATTFFPWVRRLTNKGMRTVPAS---LAAYRSIR---TTDPETGLAPVGAR-RGVVTGE------ 599 (742) Q Consensus 533 t~~~A~a~r~~~~S~~aaL~~PwVkv~d~~~~~~vPpS---gavAGl~A---rtD~e~Gv~~SPaN-~~I~~~~------ 599 (742) +......+....|+.|..+.+-. . ...-|+. ++.|++.| +.|..+ |.| ..+.+.. T Consensus 268 T~~~l~t~g~~~N~~~it~~~~~-~------~~~~p~~~~AAa~a~~aA~~l~~DPAr-----PLqtl~L~Gi~~p~~~~ 335 (498) T protein:vir:48 268 TLSELVNAGDMHNQQHITLAGYE-K------ETQSPVDELVASRLAREAVFIRNDPAR-----PTQTGELVGMLPAPKGK 335 (498) T ss_pred CHHHHHHhhhccCCceEEEEecC-C------CCCChHHHHHHHHHHHHHHhhhccccc-----cccceeeeccccCCchh Confidence 45667788888888888764311 1 1111333 33344443 344322 333 2333333 Q ss_pred cccchhHHhhhcCCceEEEEcCCC-EEEEcceec------CCCccccceeehhhhhHHHHHHHHHHHHHhhc-ccCCHH- Q lcl|Aclame:pro 600 PVRQVDWEDLYNNRINPIVRVGND-VLLFGQKTM------LNVNSALNRINVRRLLIVMRNRISQILSSYLF-ENNTSE- 670 (742) Q Consensus 600 ~ls~sE~d~LN~~GINtI~~fg~G-~rlWGnRTl------as~D~~wrfInVRR~~d~Ie~sI~~a~~~~Vf-EPNd~~- 670 (742) .++..|+|.|..+||.+..-. +| ..+--.-|. -..|+.|..|+..|+.+|+.+.++......-. +..-.+ T Consensus 336 r~~~~ern~LL~~Gist~~V~-~G~V~I~R~ITTY~~n~~G~~D~syLDi~T~~tl~yvr~~~r~~i~~kfpR~KLa~dg 414 (498) T protein:vir:48 336 RFIMTEQQTLLSHGVATAYVE-GGTLRIQRSVTTYKKNAYGVADNSYLDSETLHTSAYVLRKLKSVITSKYGRHKLANDG 414 (498) T ss_pred cCChHHHHHHHhcCcceEEEc-CCeEEEEeeeeeeeecCCCCcchhhhhhhhHHHHHHHHHHHHHHhhhhcCCceecccC Confidence 245689999999999999764 44 333333232 24678899999999999999999988764322 222111 Q ss_pred ----------HHHHHHHHHHHHHHHHHhCCceeeEE-------EEEcCCCCHHHhhCCEEEEEEEEEecCC----ceEEE Q lcl|Aclame:pro 671 ----------NRLRAEALVRQYLESLRLRGAVTDYE-------VAIDSVTTPTDIDNNTLRARVTVQPARS----IEYID 729 (742) Q Consensus 671 ----------l~~~V~~sInafL~~L~~~GAL~Gf~-------V~~DetNtp~dI~~GrL~i~I~vaP~~P----AEfI~ 729 (742) +-..|+..+-.-+++|..+|-+..+. |+-|..| | .|+.+.+-.-.+.+ +-.|. T Consensus 415 ~~~~~gq~IvTp~~ir~eli~~y~~le~~given~~~~~~~LiVerd~~d-p-----nRln~~~p~d~vn~L~V~A~~~~ 488 (498) T protein:vir:48 415 TRFGPGQAIVTPAVIKGELLATYRQMERAGIVENYDLFKQYLIVERDADN-P-----NRLNTLFPPDYVNQLRVFAVVNQ 488 (498) T ss_pred cccCCCCcccchHHHHHHHHHHHHhhhhhccccChhhhcceeEEEECCCC-C-----cEEEEEecccccCchhhhhhhhh Confidence 56788899999999999999887632 3334333 2 24444443333333 33455 Q ss_pred EEEEEeecee Q lcl|Aclame:pro 730 ITFVITPTGV 739 (742) Q Consensus 730 l~f~it~tG~ 739 (742) |++...+.++ T Consensus 489 f~lq~~~~~~ 498 (498) T protein:vir:48 489 FRLQYSEESA 498 (498) T ss_pred hhhhhhhcCC Confidence 5566666665 No 56 >protein:vir:4517 Length: 498 # NCBI annotation: tail sheath protein # Family: family:all:369 # MgeID: mge:97 # MgeName: V # Cross-refs: genbank:acc:NP_599043;genbank:gi:19549001;genbank:GeneID:935236 Probab=98.10 E-value=4.5e-06 Score=49.90 Aligned_cols=433 Identities=13% Similarity=0.078 Sum_probs=181.5 Q ss_pred eeeeecccCCceeccceeEEEEEeeccCCCCCccceeeeeeecCCCCCeeeecccCceEEEEcCceEEecccccCCcceE Q lcl|Aclame:pro 236 ENITVNREKGQVLYPSFDVVVHFRDIRGVSANTEYIRFRQVNLNPESPNYIERVIGNMTFEFDGERIVTGGEYPNQVPFL 315 (742) Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vtG~~~~n~~p~L 315 (742) -+|..|.-|.-..-| --|+.|.+=.=+.+....-.=+|| ++.-+|+..+|. |.+ T Consensus 1 M~IsF~~IP~~iRvP-----------------~~y~E~dns~A~~~~~~q~vLiiG--------q~la~gs~~~~~-~v~ 54 (498) T protein:vir:45 1 MTISFNTIPSNTLVP-----------------LFYAEMDNQAANTAQDSGASLLIG--------HANNGAEIVANS-LVL 54 (498) T ss_pred CCCchhhcCcccccC-----------------eEEEEEeCCCCCCCCCCcceEEEE--------ecCCccccccce-eEE Confidence 222222222221111 123333332223332222333343 343346555654 456 Q ss_pred EEEeccccccccccchhhhhhhhhhheecccceEEEEEEEEEeeeccccccccchhhheeeeecccccceeeeeeccccc Q lcl|Aclame:pro 316 RVVVSQDIKQNVAGVEKWVPVGFEGIYSVGDFTVIVNELTNVSIPVTDSAIIPPMRFTRIEQITLSGGASFSVISNQPYG 395 (742) Q Consensus 316 ~~si~~~~~~~~ag~s~~ip~al~aI~avg~~tv~v~~itnv~~p~tdsa~vp~~~~~li~~~~l~~ga~~~vl~~~~~~ 395 (742) .+|..+....+|.|.-.. .-..+......+. +++....++..+..-.+ ..+...... ..|....-+++.... T Consensus 55 v~s~~~a~~lfG~GSml~--~M~~a~~~~n~~~----~l~~i~~~d~aG~aA~g-~it~tg~at-~~G~l~l~Igg~~v~ 126 (498) T protein:vir:45 55 MPSADYARQICGAGSQLA--RMVEAYRQTDPFG----ELYVIAVPEATGAAATV-TLTVTGEAT-ESGTVNVYVGRTRVQ 126 (498) T ss_pred ecCHHHHHHhcCcCcHHH--HHHHHHHHhCCcc----eEEEEeeCCcccceeEE-EEEeecccC-CCcEEEEEECCEEEE Confidence 667777777777765422 1122211111111 11211111110100000 000000000 111111111111111 Q ss_pred cccc--ccccc---eeeeccCCcceeeecccccccccccceeEeecccccccccceeeeccCCcceEEEec-------CC Q lcl|Aclame:pro 396 FNIQ--DSRHS---YWLSPFKDDELIIGTELVLPALDVSTEFGVSSWEEALPEFSFLMPFQGGSDGYIRVD-------EN 463 (742) Q Consensus 396 ~~i~--~s~~~---~~Ls~l~d~s~~v~td~~a~a~d~s~~v~l~~~~~~~p~a~~av~l~gGtdg~i~vd-------~~ 463 (742) ..+. ++... .....+.....+..+ +......++++.- -.-.-|++...++. +. T Consensus 127 v~V~~gdTaa~vA~al~aaina~~~lPVT-----A~~~~~~VtlTAr----------~kG~~GN~I~l~~~~~~~~~ge~ 191 (498) T protein:vir:45 127 APVTNGDNVTTIASSIQDAINAVPTLPFT-----ASSSAGVVTLTAR----------HKGLCGNEIPVSLNYYGFGGGEV 191 (498) T ss_pred EEecCCCCHHHHHHHHHHHHhCCCCCceE-----EEecCceEEEEee----------ccCccccceeEEEeecccccccc Confidence 1100 00000 000000000000000 0000111111110 00001122111211 01 Q ss_pred ccccc--cccccccc-cccchhhHHHhhccCCccEEEEcCCCchHHHHHHHHHHHh-------hcCceEEEEECCCCCCh Q lcl|Aclame:pro 464 EPDTI--GRVKITPA-LLANYERLLPLLTEDQFDLVLTPYLTFADHAGTVNAFINR-------AENRFLYLFDIAGDDDT 533 (742) Q Consensus 464 ~~~~i--g~~~~~~~-~~a~rtGL~AL~~~d~v~LL~aPg~t~s~v~aal~Al~a~-------a~~R~~aI~D~p~~~~t 533 (742) .+.-+ ......++ .+-+.....+......+++++.|.. ++....++.+++.. ++.|......+..+ + T Consensus 192 ~p~Glt~~itamagGag~PD~a~alaal~~~~~~~I~~p~~-D~asL~al~~~L~~~sgRw~~~~q~~g~~~~a~~g--T 268 (498) T protein:vir:45 192 LPAGVQIAVATGTAGTGAPVLTGAVAAMADEPFDYIGLPFN-DTASVNTLVTEMNDTSGRWSYARQLYGHVYTAKTG--T 268 (498) T ss_pred ccceeeEEEEccCCCccCchhHHHHHHhccCCccEEEEeeC-CHHHHHHHHHHHhhhhhhhhHHhhcCeEEEEeccC--C Confidence 11000 00011111 1113333333334456788999864 44445566666643 33444333333333 4 Q ss_pred HHHHHHHHhccCCcEEEEEecceeeccccceeEech---HHHHHHHHh---hhccCceeecCCce-eeEeeec------c Q lcl|Aclame:pro 534 ENLAISLAGYINSSFATTFFPWVRRLTNKGMRTVPA---SLAAYRSIR---TTDPETGLAPVGAR-RGVVTGE------P 600 (742) Q Consensus 534 ~~~A~a~r~~~~S~~aaL~~PwVkv~d~~~~~~vPp---SgavAGl~A---rtD~e~Gv~~SPaN-~~I~~~~------~ 600 (742) ......+....|+.|..+.+.. + ...-|+ ++++||+.| +.|..+ |.| ..+.+.. . T Consensus 269 ~~~l~t~g~~~N~~~it~~~~~-~------~~~sp~~~~AAa~aa~~A~~l~~DPAr-----PL~tl~L~Gi~~p~~~~r 336 (498) T protein:vir:45 269 LSELVNAGDQFNQQHITLAGYE-K------ETQTPADELAASRTARAAVFIRNDPAR-----PTQTGELVGMLPAPKGKR 336 (498) T ss_pred HHHHHHhhhccCCceEEEEecC-C------CCCChHHHHHHHHHHHHHHHhhccccc-----ccCceeecceecCCchhc Confidence 5667788888888888765321 1 011133 233444444 344322 333 2233333 2 Q ss_pred ccchhHHhhhcCCceEEEEcCCCE-EEEcceec------CCCccccceeehhhhhHHHHHHHHHHHHHhhc-ccCCHH-- Q lcl|Aclame:pro 601 VRQVDWEDLYNNRINPIVRVGNDV-LLFGQKTM------LNVNSALNRINVRRLLIVMRNRISQILSSYLF-ENNTSE-- 670 (742) Q Consensus 601 ls~sE~d~LN~~GINtI~~fg~G~-rlWGnRTl------as~D~~wrfInVRR~~d~Ie~sI~~a~~~~Vf-EPNd~~-- 670 (742) .+..|+|.|..+||.++.- +.|. .+--.-|. -..|+.|..|+..|+.+|+.+.++......-. +..-.+ T Consensus 337 ~~~~ern~LL~~Gist~~V-~~G~V~I~R~ITTY~~n~~G~~D~syLDi~T~~tl~yvr~~~r~~i~~kfpR~KLa~dg~ 415 (498) T protein:vir:45 337 FTMTEQQTLLSHGVATAYV-ESGVLRIQRDVTTYRKNAYGVADNSYLDSETLHTSAYVLRKLKSVITSKYGRHKLASDGT 415 (498) T ss_pred CChHHHHHHHhCCcceEEE-cCCeEEEEeeeeeeeecCCCCcchhhhhhhhHHHHHHHHHHHHHHhhhhcCCeeecccCc Confidence 4578999999999999865 4563 22222221 24678899999999999999999988765322 221111 Q ss_pred ---------HHHHHHHHHHHHHHHHHhCCceeeEE-------EEEcCCCCHHHhhCCEEEEEEEEEecCC----ceEEEE Q lcl|Aclame:pro 671 ---------NRLRAEALVRQYLESLRLRGAVTDYE-------VAIDSVTTPTDIDNNTLRARVTVQPARS----IEYIDI 730 (742) Q Consensus 671 ---------l~~~V~~sInafL~~L~~~GAL~Gf~-------V~~DetNtp~dI~~GrL~i~I~vaP~~P----AEfI~l 730 (742) +-..|+..+-.-+++|..+|-+..+. |+-|.+| | .|+.+.+-.-.+.+ +-.|.| T Consensus 416 ~~~~gq~IvTp~~ir~ell~~y~~le~~givEn~~~~~~~LiVerd~~d-p-----nRln~~~p~d~vn~L~V~A~~~~f 489 (498) T protein:vir:45 416 RFGPGQAIVTPAVIKGELLATYRQLERAGIVENYELFKQYLVVERDASV-P-----NRLNTLFPPDYVNQLRVFAVVNQF 489 (498) T ss_pred ccCCCCcccchHHHHHHHHHHHHhhhhhccccChhhhcceeEEEECCCC-C-----cEEEEEecccccCchhhhhhhhhh Confidence 56788899999999999999887642 3334333 2 23444433333333 344556 Q ss_pred EEEEeecee Q lcl|Aclame:pro 731 TFVITPTGV 739 (742) Q Consensus 731 ~f~it~tG~ 739 (742) ++...+..+ T Consensus 490 ~lq~~~~~~ 498 (498) T protein:vir:45 490 RLQYSEESA 498 (498) T ss_pred heehhhcCC Confidence 666666666 No 57 >protein:vir:3788 Length: 376 # NCBI annotation: tail sheath # Family: family:all:669 # MgeID: mge:328 # MgeName: HP2 # Cross-refs: genbank:acc:NP_536828;genbank:gi:17981837;genbank:GeneID:929216 Probab=98.08 E-value=5.1e-06 Score=49.60 Aligned_cols=312 Identities=9% Similarity=0.089 Sum_probs=154.5 Q ss_pred cccceeeecc---C----C--ccee-eecccccccccccceeEeecccc----------cccccceeeeccCCcceEEEe Q lcl|Aclame:pro 401 SRHSYWLSPF---K----D--DELI-IGTELVLPALDVSTEFGVSSWEE----------ALPEFSFLMPFQGGSDGYIRV 460 (742) Q Consensus 401 s~~~~~Ls~l---~----d--~s~~-v~td~~a~a~d~s~~v~l~~~~~----------~~p~a~~av~l~gGtdg~i~v 460 (742) -.....++++ . + ..++ ++.. +.+....+.+...++ .++.-..+..+++|..-...+ T Consensus 1 ~~~~v~vn~~n~~~g~~~~~er~~Lfig~~----~~~~~~~~~~~~~sdld~~lg~~~~~lk~~v~aa~~naG~~~~~~~ 76 (376) T protein:vir:37 1 MFPSVQINALNQLSGETKEIERHALFVGVG----TTNQGKLLALTPDSDFDKVFGETDTDLKKQVRAAMLNAGQNWFAHV 76 (376) T ss_pred CCCeEEEecccccCCCcccccceEEeeccc----cccccceeeecCccchHhhhCCCchHHHHHHHHHHhCCCCcEEEEE Confidence 1122222221 1 1 1111 1110 011111111111110 000000111122222221111 Q ss_pred cCCccccccccccccccccchhhHHHhhc---cCCccEEEEcCC--CchHHHHHHHHHHHhh----cCceEEEEECCCCC Q lcl|Aclame:pro 461 DENEPDTIGRVKITPALLANYERLLPLLT---EDQFDLVLTPYL--TFADHAGTVNAFINRA----ENRFLYLFDIAGDD 531 (742) Q Consensus 461 d~~~~~~ig~~~~~~~~~a~rtGL~AL~~---~d~v~LL~aPg~--t~s~v~aal~Al~a~a----~~R~~aI~D~p~~~ 531 (742) -... . ....-+.|++. .-.+..+.+-+. ++.....++.++.+.+ ....++++..++-. T Consensus 77 ~~~~-----------~--~~~~~~~Av~~a~~~~s~E~V~v~~pv~t~~a~i~aa~~~a~el~~~~~Rpv~file~r~~~ 143 (376) T protein:vir:37 77 YIAQ-----------E--DGYDFVECVKKANQTASFEYCVNTRYLGVDKASIGKLQECYAELLAKFGRRTFFIQAVQGIN 143 (376) T ss_pred Eeec-----------C--CchHHHHHHHHhhhhcCceEEEEeccccccHHHHHHHHHHHHHHHHhcCCeEEEEEeccCcC Confidence 1000 0 00111222222 223334443343 2343444444444333 23345566654311 Q ss_pred ------Ch----HHHHHHHHhccCCcEEEEEecceeeccccceeEechHHHHHHHHhhhc----cCceeecCCceeeEee Q lcl|Aclame:pro 532 ------DT----ENLAISLAGYINSSFATTFFPWVRRLTNKGMRTVPASLAAYRSIRTTD----PETGLAPVGARRGVVT 597 (742) Q Consensus 532 ------~t----~~~A~a~r~~~~S~~aaL~~PwVkv~d~~~~~~vPpSgavAGl~ArtD----~e~Gv~~SPaN~~I~~ 597 (742) .+ .....+.++.+.+.+..++ |.+.. -..|.+||.+|+.. .++|.=+.++=.++.. T Consensus 144 ~~~~~~e~w~~y~~~~~al~~gia~~~V~~V-~~~~g---------n~~G~~aGRl~~aaVsVadspgRV~tG~l~gl~~ 213 (376) T protein:vir:37 144 HDQSDGETWDQYVQKLTTLQQTIVADHVCLV-PLLFG---------NETGVLAGRLANRAVTVADSPARVQTGALVSLGS 213 (376) T ss_pred cccccccCHHHHHHHHHHhhcccccccceee-eeehh---------hhHHHHHHHHhhcccchhhCccceeccccccccc Confidence 11 1123344456666665543 11110 12578888876431 2333323222111111 Q ss_pred e--------ccccchhHHhhhcCCceEEEEcC--CCEEEEcceecCCCccccceeehhhhhHHHHHHHHHHHHHhhcccC Q lcl|Aclame:pro 598 G--------EPVRQVDWEDLYNNRINPIVRVG--NDVLLFGQKTMLNVNSALNRINVRRLLIVMRNRISQILSSYLFENN 667 (742) Q Consensus 598 ~--------~~ls~sE~d~LN~~GINtI~~fg--~G~rlWGnRTlas~D~~wrfInVRR~~d~Ie~sI~~a~~~~VfEPN 667 (742) . ..++.+.++.|..+|-.+.+.+. .|+.+-+.|||+...+++++|..+|++|-+.|.++..+-+++.... T Consensus 214 ~~lp~d~~~~~l~~a~l~aLd~agy~vp~~Y~gy~G~Y~~d~~tl~~~gsDY~~ie~~RVvdKa~R~vR~~ai~~i~D~~ 293 (376) T protein:vir:37 214 ANKPLDKDRNELTLAHLKSLETARYSVPMWYPDYDGYYWADGRTLDVEGGDYQVIENLRVVDKVARKVRLLAIGKIADRS 293 (376) T ss_pred cccccCcCcccCCHHHHHHHHhCCCeEEEeeCCCCceEEeCceEeccCCCChhhhhhhhHHHHHHHHHHHHHHHHhCCcc Confidence 0 13456778889999999999873 3777767799988788999999999999999988888777765421 Q ss_pred ---CHHHHHHHHHHHHHHHHHHHhCCceeeE----EEEEcCC--CCHHHhhCCEEEEEEEEEecCCceEEEEEEEE--ee Q lcl|Aclame:pro 668 ---TSENRLRAEALVRQYLESLRLRGAVTDY----EVAIDSV--TTPTDIDNNTLRARVTVQPARSIEYIDITFVI--TP 736 (742) Q Consensus 668 ---d~~l~~~V~~sInafL~~L~~~GAL~Gf----~V~~Det--Ntp~dI~~GrL~i~I~vaP~~PAEfI~l~f~i--t~ 736 (742) ++.-.+..+.-+..=|++|.+..-+.|. +|...++ -+..-+...++.+.+.+.|.--...|+..+.+ +. T Consensus 294 lnst~~sia~~~~yi~~pLr~M~~s~~i~g~~fpGeI~~p~d~Di~i~w~s~~~V~I~~~v~P~~~pk~Itv~I~Ldlsn 373 (376) T protein:vir:37 294 FNSTTSSTEYHKNYFAKPLRDMSKSATINGKDFPGECMPPKDDAITIVWQSKTKVTIYIKVRPYDCPKEITANIFLDLDS 373 (376) T ss_pred cCcchhhHHHHHHHHHHHHHHHHhcchhccccccceeecCCCCCceEEeeccceEEEEEEEEeccCCceEEEEEEeecCC Confidence 3444566677677788999888888883 3444322 22233577889999999999999999876543 33 Q ss_pred cee Q lcl|Aclame:pro 737 TGV 739 (742) Q Consensus 737 tG~ 739 (742) .|- T Consensus 374 ~~~ 376 (376) T protein:vir:37 374 LGE 376 (376) T ss_pred CCC Confidence 332 No 58 >protein:vir:276 Length: 369 # NCBI annotation: putative tail sheath protein # Family: family:all:669 # MgeID: mge:7 # MgeName: K139 # Cross-refs: genbank:acc:NP_536656;genbank:gi:17975134;genbank:GeneID:929090 Probab=97.98 E-value=8.2e-06 Score=48.48 Aligned_cols=331 Identities=11% Similarity=0.034 Sum_probs=156.7 Q ss_pred ccccchhhheeee--ecccccceeeeeecccccccccccccceeeeccCCcceeeecccccccccccceeEeec--cccc Q lcl|Aclame:pro 365 AIIPPMRFTRIEQ--ITLSGGASFSVISNQPYGFNIQDSRHSYWLSPFKDDELIIGTELVLPALDVSTEFGVSS--WEEA 440 (742) Q Consensus 365 a~vp~~~~~li~~--~~l~~ga~~~vl~~~~~~~~i~~s~~~~~Ls~l~d~s~~v~td~~a~a~d~s~~v~l~~--~~~~ 440 (742) =+.|....+.++. -..+.-+..-++... +.. ..+. .+.+. ++....+...- .+.. T Consensus 1 m~~~~V~in~~n~~qg~~~~ver~~lfig~----g~~-~~~~--------g~~~~--------~~~~sdld~~lg~~ds~ 59 (369) T protein:vir:27 1 MAWPTVIIKILNLMNGPIADIECHFLFVIR----GTV-SGEV--------RNLIM--------VDSTSDLDDVLAEASAE 59 (369) T ss_pred CCCCceEEecccccCCCcccccceEEEEEe----ccc-cccc--------cceEE--------ecCccchHhhcCCcChh Confidence 1111111111000 000000111111100 000 0000 00000 01111111111 1111 Q ss_pred ccccceeeeccCCcceEEEecCCccccccccccccccccchhhHHHhhccCCccEEEEcCC-CchHHHHHHHHHHHhh-- Q lcl|Aclame:pro 441 LPEFSFLMPFQGGSDGYIRVDENEPDTIGRVKITPALLANYERLLPLLTEDQFDLVLTPYL-TFADHAGTVNAFINRA-- 517 (742) Q Consensus 441 ~p~a~~av~l~gGtdg~i~vd~~~~~~ig~~~~~~~~~a~rtGL~AL~~~d~v~LL~aPg~-t~s~v~aal~Al~a~a-- 517 (742) +..-..+..+.+|..-...+.+... ..+. -..++.......+..+.+-+. ++...+.++.++.+.+ T Consensus 60 lk~~v~aa~~naG~~w~a~~~p~~~-------~~~~----~~Av~~a~~~~s~E~V~v~~p~t~~a~i~aaq~~a~el~~ 128 (369) T protein:vir:27 60 GLAIVKAAQLNGKQAWTAGVMILSE-------EDNW----QDAVKKANEVSSFEFVVLGFDAETKAMIEDAITLRTELKN 128 (369) T ss_pred HHHHHHHHHhCCCCceEEEEEEeCC-------chhH----HHHHHhhhhhCCccEEEEecCcccHHHHHHHHHHHHHHHH Confidence 1111122223344333222211100 0000 011221122223444555453 3434444444443332 Q ss_pred --cCceEEEEECCCC----CCh------HHHHHHHHhccCCcEEEEEecceeeccccceeEechHHHHHHHHhhhccCce Q lcl|Aclame:pro 518 --ENRFLYLFDIAGD----DDT------ENLAISLAGYINSSFATTFFPWVRRLTNKGMRTVPASLAAYRSIRTTDPETG 585 (742) Q Consensus 518 --~~R~~aI~D~p~~----~~t------~~~A~a~r~~~~S~~aaL~~PwVkv~d~~~~~~vPpSgavAGl~ArtD~e~G 585 (742) ....++++..++- .+. .....+.++.+.+.+..++--+.+.. .-.|.+||.+|... .- T Consensus 129 ~~~R~vffi~e~~~~~~~~~~~e~w~dy~a~l~al~~g~a~~~V~vv~~~~~~g--------n~~G~~aGRl~n~a--Vs 198 (369) T protein:vir:27 129 SLGREVGVLCQLPAINNDPTNGQTWSEWLADTVDIPKDVASEYISVVPNVHAAG--------DTLGKYAGRLANKE--VS 198 (369) T ss_pred hcCCeEEEEEeccccCCCccccCCHHHHHHHHHHHhhccCcccceeeeeecccc--------chHHHHHHHHHhcc--cc Confidence 3344556554321 111 23345566788888888873332211 23577888876421 11 Q ss_pred eecCCcee------eEee------eccccchhHHhhhcCCceEEEEcC--CCEEEEcceecCCCccccceeehhhhhHHH Q lcl|Aclame:pro 586 LAPVGARR------GVVT------GEPVRQVDWEDLYNNRINPIVRVG--NDVLLFGQKTMLNVNSALNRINVRRLLIVM 651 (742) Q Consensus 586 v~~SPaN~------~I~~------~~~ls~sE~d~LN~~GINtI~~fg--~G~rlWGnRTlas~D~~wrfInVRR~~d~I 651 (742) +.-+|... ++.. ..+++.+.++.|..+|-.+.+.+. .|+..-+.||++...+++++|..+|++|-+ T Consensus 199 Iadsp~RVktG~l~g~~~~p~d~~g~~l~~a~l~aLd~agysvp~~Y~gy~G~Yw~d~~tl~~~gsDYq~iE~~RVvdKa 278 (369) T protein:vir:27 199 IADSPARVQTGSVLGNTELMKDKAGKALDLATLKALESNRIAVPMWYPDYPGQYWTTGRTLDVPGGDYQDIRHIRVAMKA 278 (369) T ss_pred hhcCcceeeecccccccccccCCCCcccCHHHHHHHHhCCCeEEEeeCCCCceEEeCceEeccCCCCeehhhhhhHHHHH Confidence 23344322 1110 012455678889999999999874 377666679998888899999999999999 Q ss_pred HHHHHHHHHHhhccc---CCHHHHHHHHHHHHHHHHHHHhCCceeeEEEEEcC--CCCHHHhhCCEEEEEEEEEecCCce Q lcl|Aclame:pro 652 RNRISQILSSYLFEN---NTSENRLRAEALVRQYLESLRLRGAVTDYEVAIDS--VTTPTDIDNNTLRARVTVQPARSIE 726 (742) Q Consensus 652 e~sI~~a~~~~VfEP---Nd~~l~~~V~~sInafL~~L~~~GAL~Gf~V~~De--tNtp~dI~~GrL~i~I~vaP~~PAE 726 (742) .|.++..+-+.+..+ .++.-.+..+.-+..=|++|.+.+ ..++|.-.+ +-+-.-....++.+.+.+.|.--.. T Consensus 279 ~R~vR~~Ai~~i~Dr~lnstp~sia~~~~~~~~pLr~M~ks~--fpgei~~P~d~dI~i~w~~k~~V~I~~~vrP~~~pk 356 (369) T protein:vir:27 279 ARKVRIRAIARIADRTLNSTPQSIAAAKLYFTQDLRTMALTG--VPGEIYPPEDEDIQIKWVNSTDVEIYMSVQPYECPV 356 (369) T ss_pred HHHHHHHHHHHhcCcccccChhHHHHHHHHHhhHHHHHHhhc--CCeEEecCCCCceEEEeeccceEEEEEEEeeccCCc Confidence 998888777666553 356667777888888888887653 223333211 1111112445788888889998889 Q ss_pred EEEEEEEEeecee Q lcl|Aclame:pro 727 YIDITFVITPTGV 739 (742) Q Consensus 727 fI~l~f~it~tG~ 739 (742) .|+.++.+...-- T Consensus 357 ~it~~I~ldl~~~ 369 (369) T protein:vir:27 357 KITIAISVKQGDY 369 (369) T ss_pred eEEEEEEEeccCC Confidence 9998887543322 No 59 >protein:vir:4463 Length: 498 # NCBI annotation: Tail Sheath protein # Family: family:all:369 # MgeID: mge:96 # MgeName: ST64B # Cross-refs: genbank:acc:NP_700386;genbank:gi:23505458;genbank:GeneID:955665 Probab=97.68 E-value=2.9e-05 Score=45.45 Aligned_cols=431 Identities=11% Similarity=0.061 Sum_probs=180.3 Q ss_pred eeeeecccCCceeccceeEEEEEeeccCCCCCccceeeeeeecCCCCCeeeecccCceEEEEcCceEEecccccCCcceE Q lcl|Aclame:pro 236 ENITVNREKGQVLYPSFDVVVHFRDIRGVSANTEYIRFRQVNLNPESPNYIERVIGNMTFEFDGERIVTGGEYPNQVPFL 315 (742) Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vtG~~~~n~~p~L 315 (742) -+|..+.-|+-..-| --|+.|.|=.-+.+....-.=+|| ++..+|+..+|. |.+ T Consensus 1 M~IsF~~IP~~iRvP-----------------~~y~E~dns~A~~~~~~q~vLiiG--------q~la~gs~~~~~-~v~ 54 (498) T protein:vir:44 1 MAISFNSIPSDTRVP-----------------LFYAEMDNSAANTARDSGASLLIG--------HASNDASIAVNS-LVL 54 (498) T ss_pred CCCchhhcCcccccC-----------------eEEEEEeCCCCCCCcCCcceEEEE--------ecCcccccccce-eEe Confidence 122222222211111 123433332223333333333344 444446555554 456 Q ss_pred EEEeccccccccccchhh-hhhhhhhheecccceEEEEEEEEEeeeccccccccchhhheeeeecccccceeee-eeccc Q lcl|Aclame:pro 316 RVVVSQDIKQNVAGVEKW-VPVGFEGIYSVGDFTVIVNELTNVSIPVTDSAIIPPMRFTRIEQITLSGGASFSV-ISNQP 393 (742) Q Consensus 316 ~~si~~~~~~~~ag~s~~-ip~al~aI~avg~~tv~v~~itnv~~p~tdsa~vp~~~~~li~~~~l~~ga~~~v-l~~~~ 393 (742) .+|..+....+|.|.-.. .-.+.......+.- +....++..+..-.+ ..+...... ..| ...+ ++++. T Consensus 55 v~s~~~a~~~fG~GSml~~M~~a~~~~n~~~~l-------~~i~~~D~aG~aAtg-~it~tg~at-~~G-~l~l~Igg~~ 124 (498) T protein:vir:44 55 VSSVDYARQICGAGSQLARMVGAYRKTDPFGEL-------YVIAVPESTGAAATV-ALTVTGEAT-ETG-TVNVYTGRTR 124 (498) T ss_pred ecCHHHHHHhcCcccHHHHHHHHHHHhCCCcee-------EEEecCCcccceeEE-EEEeecccC-CCc-EEEEEECCEE Confidence 667777777777765422 11111111111111 111111111110000 000100000 111 1111 11111 Q ss_pred cccccc--ccccc---eeeeccCCcceeeecccccccccccceeEeecccccccccceeeeccCCcceEEEecCC----- Q lcl|Aclame:pro 394 YGFNIQ--DSRHS---YWLSPFKDDELIIGTELVLPALDVSTEFGVSSWEEALPEFSFLMPFQGGSDGYIRVDEN----- 463 (742) Q Consensus 394 ~~~~i~--~s~~~---~~Ls~l~d~s~~v~td~~a~a~d~s~~v~l~~~~~~~p~a~~av~l~gGtdg~i~vd~~----- 463 (742) ....+. ++... ...........+..+ +......++++.- -.-.-|++...++... T Consensus 125 v~v~V~~gdTaa~vA~al~aaina~~~lPVT-----A~~~~~~vtlTAr----------~kG~~GN~I~l~~~~~~~~~g 189 (498) T protein:vir:44 125 VQAPVTSGDDAAAVAVSIKDAVNANPDLPFT-----ATSEAGVVTLTAR----------HKGLYGNEIPVTLNYYGFGGG 189 (498) T ss_pred EEEEecCCCCHHHHHHHHHHHHhCCCCCceE-----EeeccceEEEEEe----------ccCcccCcceEEEeeccCccc Confidence 111100 00000 000000000000000 0000111111110 0000112222221100 Q ss_pred cccccc----cccccc-ccccchhhHHHhhccCCccEEEEcCCCchHHHHHHHHHHHh-------hcCceEEEEECCCCC Q lcl|Aclame:pro 464 EPDTIG----RVKITP-ALLANYERLLPLLTEDQFDLVLTPYLTFADHAGTVNAFINR-------AENRFLYLFDIAGDD 531 (742) Q Consensus 464 ~~~~ig----~~~~~~-~~~a~rtGL~AL~~~d~v~LL~aPg~t~s~v~aal~Al~a~-------a~~R~~aI~D~p~~~ 531 (742) +....| .....+ ..+-+.....+......+++++.|.. ++....++.+++.. ++.|.........+ T Consensus 190 e~~p~Glt~titamsgGag~PDia~alaal~~~~~~~i~~p~~-D~asl~al~~~L~~~sgRw~~~~q~~g~~~~a~~g- 267 (498) T protein:vir:44 190 EVLPAGVNITVASGVKGAGAPALNDAVAAMGDEPFDYIGLPFN-DTASVNSMATEMNDSSGRWSYVRQLYGHVYTAKTG- 267 (498) T ss_pred cccccceeEEEEcccCCccCchhHHHHHhhccCCccEEEEeec-CHHHHHHHHHHHhhhhcchHHHhhcCeEEEEeccC- Confidence 000001 001111 11113333333344456788999864 45545566666643 23333333333333 Q ss_pred ChHHHHHHHHhccCCcEEEEEecceeeccccceeEechH---HHHHHHHh---hhccCceeecCCcee-eEeeec----- Q lcl|Aclame:pro 532 DTENLAISLAGYINSSFATTFFPWVRRLTNKGMRTVPAS---LAAYRSIR---TTDPETGLAPVGARR-GVVTGE----- 599 (742) Q Consensus 532 ~t~~~A~a~r~~~~S~~aaL~~PwVkv~d~~~~~~vPpS---gavAGl~A---rtD~e~Gv~~SPaN~-~I~~~~----- 599 (742) +...+.++....|+.|..+.+.. +. ..-|+. +++|++.| +.|..+ |.|. .+.+.. T Consensus 268 -T~a~l~t~g~~~N~~~it~~~~~-~~------~~sp~~~~AAa~a~~aA~~l~~DPAr-----PL~tl~L~Gi~~p~~~ 334 (498) T protein:vir:44 268 -TLSELVAAGDQFNLQHITLAGYE-KD------TQTPADELAASRTARAAVFIRNDPAR-----PTQTGELVDMLPAPKG 334 (498) T ss_pred -CHHHHHHhhhccCCceEEEEecC-CC------CCCHHHHHHHHHHHHHHHHhhccccc-----ccCceeecccccCCch Confidence 35667788888888887664321 10 011332 33444444 344322 3332 233333 Q ss_pred -cccchhHHhhhcCCceEEEEcCCCE-EEEcceec------CCCccccceeehhhhhHHHHHHHHHHHHHhhc-ccCCH- Q lcl|Aclame:pro 600 -PVRQVDWEDLYNNRINPIVRVGNDV-LLFGQKTM------LNVNSALNRINVRRLLIVMRNRISQILSSYLF-ENNTS- 669 (742) Q Consensus 600 -~ls~sE~d~LN~~GINtI~~fg~G~-rlWGnRTl------as~D~~wrfInVRR~~d~Ie~sI~~a~~~~Vf-EPNd~- 669 (742) ..+..|+|.|..+||.++.- +.|. .+--.-|. -..|+.|..|+..|+.+|+.+.++......-. +..-. T Consensus 335 ~r~~~~ern~LL~~Gist~~V-~~G~V~I~R~ITTY~~n~~G~~D~syLDi~T~~tl~yvr~~~r~~i~~kfpR~KLa~d 413 (498) T protein:vir:44 335 KRFTTTEQQTLLSHGVATAYV-ESGVLRIQRDITTYRKNAYGVADNSYLDSETLHTSAYVLRRLKSVITSKYGRHKLAND 413 (498) T ss_pred hcCChHHHHHHHhcCcceEEE-cCCeEEEEeeeeeeeecCCCCcchhhhhhhhHHHHHHHHHHHHHHhhhhcCCcccccC Confidence 24578999999999999865 4563 22222221 24678899999999999999999988764322 22111 Q ss_pred ----------HHHHHHHHHHHHHHHHHHhCCceeeEE-------EEEcCCCCHHHhhCCEEEEEEEEEecCC----ceEE Q lcl|Aclame:pro 670 ----------ENRLRAEALVRQYLESLRLRGAVTDYE-------VAIDSVTTPTDIDNNTLRARVTVQPARS----IEYI 728 (742) Q Consensus 670 ----------~l~~~V~~sInafL~~L~~~GAL~Gf~-------V~~DetNtp~dI~~GrL~i~I~vaP~~P----AEfI 728 (742) -+-..|+..+-.-+++|..+|-+..+. |+-|..| | .|+.+.+-.-.+.+ +-.| T Consensus 414 ~~~~~~gq~IvTp~~ir~eli~~y~~le~~givEn~~~~~~~LiVerd~~d-p-----nRln~~~p~d~vn~L~V~A~~~ 487 (498) T protein:vir:44 414 GTRFGSGQAIVTPAVIRGELGSTYRQMEREGIVENFDLFQQHLIVERNAND-S-----NRLDVLFPPDYVNQLRVFAVLN 487 (498) T ss_pred CcccCCCcccccHHHHHHHHHHHHHhhhhhccccChhhhcceeEEEECCCC-C-----cEEEEEecccccCchhhhhhhh Confidence 256788999999999999999887642 3333332 1 24444443333333 3344 Q ss_pred EEEEEEeecee Q lcl|Aclame:pro 729 DITFVITPTGV 739 (742) Q Consensus 729 ~l~f~it~tG~ 739 (742) .|++...+..+ T Consensus 488 ~f~lq~~~~~~ 498 (498) T protein:vir:44 488 QFRLQYSEEAA 498 (498) T ss_pred hhhhhhhhhcC Confidence 55555555555 No 60 >protein:vir:3165 Length: 426 # NCBI annotation: capsid protein CP67 # Family: family:all:28419 # MgeID: mge:316 # MgeName: PhiCh1 # Cross-refs: genbank:acc:NP_665936;genbank:gi:22091122;genbank:GeneID:951267 Probab=96.59 E-value=0.00048 Score=38.76 Aligned_cols=387 Identities=12% Similarity=0.055 Sum_probs=139.3 Q ss_pred ecccc-ccccccchhhhhhhhhhheecccceEEEEEEEEEeeeccccccccchhhheeeeecc--cccceeeeeec---- Q lcl|Aclame:pro 319 VSQDI-KQNVAGVEKWVPVGFEGIYSVGDFTVIVNELTNVSIPVTDSAIIPPMRFTRIEQITL--SGGASFSVISN---- 391 (742) Q Consensus 319 i~~~~-~~~~ag~s~~ip~al~aI~avg~~tv~v~~itnv~~p~tdsa~vp~~~~~li~~~~l--~~ga~~~vl~~---- 391 (742) -++++ .-++.-....+| .-.|+... +-.+|....|...|++...+.. ..+++|..-+. T Consensus 1 m~~~iVnV~Is~~t~A~~--------~~~Fg~~l-------iigs~~~~~p~~~f~~~~~Yss~~~V~~Dfg~~s~~Y~A 65 (426) T protein:vir:31 1 MPKQIVEIELTAEIADRP--------QETFTDAA-------IVGTAEEEPPDAEFGEVNQYSTSTSVGDDYGEDSDVYTA 65 (426) T ss_pred CCcceEEEEeeccccccc--------ccccceee-------eeeeccccccccccchhhhhhhHHHHHhcCCCChHHHHH Confidence 11110 000000000010 01122111 1112222122121222222211 11111110000 Q ss_pred ------ccccccccc-cccceeeeccCCcceee-ecc-cccccccccceeEeecccccccccce--eeeccCCcceEEEe Q lcl|Aclame:pro 392 ------QPYGFNIQD-SRHSYWLSPFKDDELII-GTE-LVLPALDVSTEFGVSSWEEALPEFSF--LMPFQGGSDGYIRV 460 (742) Q Consensus 392 ------~~~~~~i~~-s~~~~~Ls~l~d~s~~v-~td-~~a~a~d~s~~v~l~~~~~~~p~a~~--av~l~gGtdg~i~v 460 (742) +....+-.. ...+...+...+....+ +.+ .+...... ....+..+....+.... ........++...+ T Consensus 66 A~~~f~Q~~~~~r~~v~~at~~~~~~~t~~~tv~g~~~s~~a~~~~-~a~~i~~~~~~~~~~~~~~~~~~~~t~~g~~t~ 144 (426) T protein:vir:31 66 SEAIEEMGAEQWRVMVLEATEVTEEELSDGDTIDKVPILGNHEVES-PDGDIEFTTDDDPDVEDFDAEIVINSATGDVAT 144 (426) T ss_pred HHHHHhCCceeEEeeccccceeeeccCCcceeecceeeeecccCcc-hHHHHHHhhccccccccceeeeEeccccceeec Confidence 000000000 00000001010111000 000 00000000 00000000000000000 00000000111110 Q ss_pred cCCccccccccccccccccchhhHHHhhccCCccEEEEcCCC-chHHHHHHHHHHHhh-cCceEEEEECCC--CCChHHH Q lcl|Aclame:pro 461 DENEPDTIGRVKITPALLANYERLLPLLTEDQFDLVLTPYLT-FADHAGTVNAFINRA-ENRFLYLFDIAG--DDDTENL 536 (742) Q Consensus 461 d~~~~~~ig~~~~~~~~~a~rtGL~AL~~~d~v~LL~aPg~t-~s~v~aal~Al~a~a-~~R~~aI~D~p~--~~~t~~~ 536 (742) ..... . .....++-.++..+.. ..+.-.++... .-..+..+..+...+ ..+...+..... .....+. T Consensus 145 ~~~~~------~-~~~s~~dw~~~~~~~s--~~~~~~ia~~~~~~~~~~~~~~~~~wa~~~~i~~va~~~e~~~~~~~~~ 215 (426) T protein:vir:31 145 SEDSI------E-LTYFHADWSQLDEFPS--DVNNFAVADRRFDLKGVGVLDETHSWASDEDMGMIANGVNVDDYDSVDE 215 (426) T ss_pred cccce------e-eeeccCcchhhhcccc--cchhhhhhccccchhhhhhhHhhhhhhhhcceeeeeeccchhhhcchhh Confidence 00000 0 0000111112221111 11111111100 001112222222222 123322221111 1111111 Q ss_pred HHHHHhccCCcEEEEEecceeeccccceeEechHHHHHHHHhhhccCceeec-C-CceeeE-ee-----e-ccccchhHH Q lcl|Aclame:pro 537 AISLAGYINSSFATTFFPWVRRLTNKGMRTVPASLAAYRSIRTTDPETGLAP-V-GARRGV-VT-----G-EPVRQVDWE 607 (742) Q Consensus 537 A~a~r~~~~S~~aaL~~PwVkv~d~~~~~~vPpSgavAGl~ArtD~e~Gv~~-S-PaN~~I-~~-----~-~~ls~sE~d 607 (742) +...+.. ..-|.|-...........--..+++++.++.++..+-.++ . |.+... .. . ..+...++- T Consensus 216 ~~a~~~~-----~~~y~p~~~~~~~~~~~~~~~~~~~~~~~aa~~~~~~~~~~~~~~~~~~~~~~~~~gv~~t~~~~~~A 290 (426) T protein:vir:31 216 AMDVAHE-----VAGYVPSGDLMMIVDASDDDLAAYQLGKFAVSEPWYNPLWNELPAGETVSKNVGDPEEQGTFEGGDEA 290 (426) T ss_pred hhhhhhc-----ccccccchhheeehhccccchhhHHhhhhhhhccccchhhhhccccccceeeccccccccccchhhhh Confidence 2222111 1112221100000000000125788888887764221110 0 111100 00 0 011222333 Q ss_pred hhhcCCceEEEEcCCCEEEEcceecCCCccccceeehhhhhHHHHHHHHHHHHHhhc---c-cCCHHHHHHHHHHHHHHH Q lcl|Aclame:pro 608 DLYNNRINPIVRVGNDVLLFGQKTMLNVNSALNRINVRRLLIVMRNRISQILSSYLF---E-NNTSENRLRAEALVRQYL 683 (742) Q Consensus 608 ~LN~~GINtI~~fg~G~rlWGnRTlas~D~~wrfInVRR~~d~Ie~sI~~a~~~~Vf---E-PNd~~l~~~V~~sInafL 683 (742) .++ +..|++..+.++..+|-.-|..+....-.||-++|..+|+++.++..++...= + |-|..-+..|+..|+.-| T Consensus 291 ~~~-~~~n~~~~~~~~~~i~~~~~~~G~~~~G~~iD~~~g~dwl~~~iq~~l~~ll~~~~KIpyt~~Gi~~I~~~i~~~L 369 (426) T protein:vir:31 291 EGE-GPVNVLIDVSDANRVSNAVTTAGADSDTSFFDIRRTKVYTAEMLELDLESLQVSDDDVPFTEDGQAMIEDAIKGTM 369 (426) T ss_pred hhc-CCceEEEEecCceeeecceeecccccchhhhhhHHHHHHHHHHHHHHHHHHhhcCCCCccchhHHHHHHHHHHHHH Confidence 444 77799988766777776666667666678999999999999999999987553 3 788999999999999999 Q ss_pred HHHHhCCc--eeeEEEEEc-CCCCHHHhhCCEEE-EEEEEEecCCceEEEEEEEEee Q lcl|Aclame:pro 684 ESLRLRGA--VTDYEVAID-SVTTPTDIDNNTLR-ARVTVQPARSIEYIDITFVITP 736 (742) Q Consensus 684 ~~L~~~GA--L~Gf~V~~D-etNtp~dI~~GrL~-i~I~vaP~~PAEfI~l~f~it~ 736 (742) ++.++.|. +.+|.|..- ......|.++.++. +++.......++++.++..++- T Consensus 370 ~~~v~~~g~~~~~y~v~~P~~~~~~~dra~R~~~~i~~~~~laGAIh~v~I~g~v~v 426 (426) T protein:vir:31 370 SGLTGSVGQPLAEYEVDVPEWDDDDVDRVNRNWGGIDLDARLAQRAHTFSLGLNVSV 426 (426) T ss_pred HHHhcCCCccccceeecCCCccccchhhhhhccCCceEEEEEeCcEEEEEEEEEEeC Confidence 99998644 456888653 22333455555543 6677777899999999888777 No 61 >protein:vir:1996 Length: 495 # NCBI annotation: major tail subunit # Family: family:all:369 # MgeID: mge:320 # MgeName: Mu # Cross-refs: genbank:acc:NP_050643;genbank:gi:9633530;genbank:GeneID:2636269 Probab=96.01 E-value=0.0011 Score=36.76 Aligned_cols=432 Identities=13% Similarity=0.104 Sum_probs=179.1 Q ss_pred EeeeeecccCCceeccceeEEEEEeeccCCCCCccceeeeeeecCCCCCeeeecccCceEEEEcCceEEecccccCCcce Q lcl|Aclame:pro 235 IENITVNREKGQVLYPSFDVVVHFRDIRGVSANTEYIRFRQVNLNPESPNYIERVIGNMTFEFDGERIVTGGEYPNQVPF 314 (742) Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vtG~~~~n~~p~ 314 (742) +.+|..+.-|.-..-|- -|+.|.+=.-++--|.... .+.-=|++.-+|+..+|. |. T Consensus 1 m~~i~F~~IP~~iRvP~-----------------~y~E~dns~A~~g~~~~~q------~vLiiGq~la~gs~~~~~-pv 56 (495) T protein:vir:19 1 MSDISFNAIPSDVRVPL-----------------TYIEFDNSNAVSGTPAPRQ------RVLMFGQSGSKASAAPNV-PV 56 (495) T ss_pred CCCCchhhCCcccccCe-----------------EEEEEccCCCCcCCcCCCc------eEEEEEecCcccccccce-eE Confidence 55555555554333222 2343333222221121111 122224444456666654 55 Q ss_pred EEEEeccccccccccchhh-hhhhhhhheecccceEEEEEEEEEeeecccccccc-chhhheeeeecccccceeeeeecc Q lcl|Aclame:pro 315 LRVVVSQDIKQNVAGVEKW-VPVGFEGIYSVGDFTVIVNELTNVSIPVTDSAIIP-PMRFTRIEQITLSGGASFSVISNQ 392 (742) Q Consensus 315 L~~si~~~~~~~~ag~s~~-ip~al~aI~avg~~tv~v~~itnv~~p~tdsa~vp-~~~~~li~~~~l~~ga~~~vl~~~ 392 (742) +.+|..+....+|.|.-.. .-.+.......+.- +... ..|.+-+. .-+.+...... ..|....-++++ T Consensus 57 ~v~s~~~a~~~fG~GS~la~M~~a~~~~n~~~~l-------~~i~--~~D~aG~aA~g~it~tg~at-~~G~l~l~I~g~ 126 (495) T protein:vir:19 57 RIRSGSQASAAFGQGSMLALMADAFLNANRVAEL-------WCIP--QGNGTGNAAVGEISLSGTAG-ENGSLVTYIAGQ 126 (495) T ss_pred EecCHHHHHHhcCcCcHHHHHHHHHHHhCCcceE-------EEEe--eCChhhceeEEEEEEeecCC-CCcEEEEEECCE Confidence 6677777777777765422 11111111111111 1111 11211000 00001111110 111111111111 Q ss_pred cccccccccccc-ee----eeccCCcceeeeccccccc---ccccceeEeecccccccccceeeeccC-CcceEEEec-- Q lcl|Aclame:pro 393 PYGFNIQDSRHS-YW----LSPFKDDELIIGTELVLPA---LDVSTEFGVSSWEEALPEFSFLMPFQG-GSDGYIRVD-- 461 (742) Q Consensus 393 ~~~~~i~~s~~~-~~----Ls~l~d~s~~v~td~~a~a---~d~s~~v~l~~~~~~~p~a~~av~l~g-Gtdg~i~vd-- 461 (742) .....+...... .. ...+.....+..+...... ......++++ ....| +.+..+++. T Consensus 127 ~v~v~V~~gdTaa~vA~al~aaina~~~lPvTA~~~~~~~~~~a~~~VtlT------------Ar~kG~~n~idi~~~~~ 194 (495) T protein:vir:19 127 RLAVSVAAGATGAALADLLVARIKGQPDLPVTAEVRADSGDDDTHADVVLS------------AKFTGALSAVDVRWNYY 194 (495) T ss_pred EEEEEecCCCCHHHHHHHHHHHhcCCccCceEEEeeccCCCCcCceeEEEE------------EeeccccccceeEEEee Confidence 111110000000 00 0000000000000000000 0000111111 01111 111111211 Q ss_pred --CCccccc--cccccc-cccccchhhHHHhhccCCccEEEEcCCCchHHHHHHHHHHHh----hcCceEEEEECCCCCC Q lcl|Aclame:pro 462 --ENEPDTI--GRVKIT-PALLANYERLLPLLTEDQFDLVLTPYLTFADHAGTVNAFINR----AENRFLYLFDIAGDDD 532 (742) Q Consensus 462 --~~~~~~i--g~~~~~-~~~~a~rtGL~AL~~~d~v~LL~aPg~t~s~v~aal~Al~a~----a~~R~~aI~D~p~~~~ 532 (742) +..+.-+ ...... +..+-+.....+......+++++.|.-+ +....++..+++. ++.|......+..+ T Consensus 195 ~ge~~p~Glt~titamsgGag~PDia~alaal~~~~~~~I~~P~tD-~asL~al~~~l~~rw~~~~q~~g~~~~a~~g-- 271 (495) T protein:vir:19 195 AGETTPYGIITAFKAASGKNGNPDISASIAGMGDLQYKYIVMPYTD-EPNLNLLRTELQERWGPVNQADGFAVTVLSG-- 271 (495) T ss_pred cccccccceeEEEEecCCCCCCcchHHHHHHhccCCCcEEEEecCc-HHHHHHHHHHHHHhhhHHHhcCeEEEEeecC-- Confidence 1111100 000011 1111133333333345678899998654 4434455555543 23333333333333 Q ss_pred hHHHHHHHHhccCCcEEEEEecceeeccccceeEechHH---HHHHHHh---hhccCceeecCCce-eeEeeec------ Q lcl|Aclame:pro 533 TENLAISLAGYINSSFATTFFPWVRRLTNKGMRTVPASL---AAYRSIR---TTDPETGLAPVGAR-RGVVTGE------ 599 (742) Q Consensus 533 t~~~A~a~r~~~~S~~aaL~~PwVkv~d~~~~~~vPpSg---avAGl~A---rtD~e~Gv~~SPaN-~~I~~~~------ 599 (742) +......+....|+.|..+.+ +. + ..-||.. ++|++.| +.|..+ |.| ..+.+.. T Consensus 272 T~~~l~t~g~~~N~~~it~~~--~~----g--sp~~~~~~AAA~aa~~A~~l~~DPAr-----PL~tl~L~Gi~~p~~~~ 338 (495) T protein:vir:19 272 TYGDISTFGVSRNDHLISCMG--IA----G--APEPSYLYAATLCAVASQALSIDPAR-----PLQTLTLPGRMPPAVGD 338 (495) T ss_pred CHHHHHHhhhccCCceEEEEe--cC----C--CCCcHHHHHHHHHHHHHHHhhccccc-----ccCceeecceecCCccc Confidence 455677788888888877652 21 1 1113333 3333333 334322 333 2233333 Q ss_pred cccchhHHhhhcCCceEEEEcCCCE-EEEcceec------CCCccccceeehhhhhHHHHHHHHHHHHHhhcc-cCCHH- Q lcl|Aclame:pro 600 PVRQVDWEDLYNNRINPIVRVGNDV-LLFGQKTM------LNVNSALNRINVRRLLIVMRNRISQILSSYLFE-NNTSE- 670 (742) Q Consensus 600 ~ls~sE~d~LN~~GINtI~~fg~G~-rlWGnRTl------as~D~~wrfInVRR~~d~Ie~sI~~a~~~~VfE-PNd~~- 670 (742) .++..|+|.|..+||.++.--.+|. .+--.-|. -..|+.|..|+.-|+.+|+.+.++......-.+ ..-.+ T Consensus 339 r~~~~ern~LL~~Gist~~V~~~G~V~I~R~ITTY~~n~~G~~D~syLDi~T~~tl~yvr~~~r~~i~~kfpR~KLa~d~ 418 (495) T protein:vir:19 339 RFTWSERNALLFDGISTFNVNDGGEMQIERMITMYRTNKYGDSDPSYLNVNTIATLSYLRYSLRTRITQKFPNYKLASDG 418 (495) T ss_pred cCChHHHHHHHhCCcceEEECCCCeEEEEeeeeeeeecCCCCcchhhhhhHHHHHHHHHHHHHHHHHhhhcCCcccccCC Confidence 2456899999999999987543453 33332232 135788999999999999999999877643322 22111 Q ss_pred ----------HHHHHHHHHHHHHHHHHhCCceeeEE-------EEEcCCCCHHHhhCCEEEEEEEEEecCCceEEE--EE Q lcl|Aclame:pro 671 ----------NRLRAEALVRQYLESLRLRGAVTDYE-------VAIDSVTTPTDIDNNTLRARVTVQPARSIEYID--IT 731 (742) Q Consensus 671 ----------l~~~V~~sInafL~~L~~~GAL~Gf~-------V~~DetNtp~dI~~GrL~i~I~vaP~~PAEfI~--l~ 731 (742) +-..|+..+-.-+++|..+|-+..+. |+-|.+| | +|+.+.+-...+.+..-+- ++ T Consensus 419 ~~~~~gq~IvTp~~ir~ell~~~~~le~~given~~~~~~~LiVerd~~d-p-----nRln~~~p~d~vn~L~V~A~~i~ 492 (495) T protein:vir:19 419 TRFATGQAVVTPSVIKTELLALFEEWENAGLVEDFDTFKEELYVARNKDD-K-----DRLDVLCGPNLINQFRIFAAQVQ 492 (495) T ss_pred CCCCCcccccChHHHHHHHHHHHHhhhhhccccChhhhcceeEEEECCCC-C-----cEEEEEecceeeCceeeeeeeee Confidence 55678888888999999999887642 3334332 1 3555555444444433331 22 Q ss_pred EEE Q lcl|Aclame:pro 732 FVI 734 (742) Q Consensus 732 f~i 734 (742) |+. T Consensus 493 f~L 495 (495) T protein:vir:19 493 FIL 495 (495) T ss_pred eeC Confidence 222 No 62 >protein:vir:96104 Length: 504 # NCBI annotation: hypothetical protein ORF029 # Family: family:all:396 # MgeID: mge:1597 # MgeName: F8 # Cross-refs: genbank:acc:YP_001294446;genbank:gi:149408343;genbank:GeneID:5237223 Probab=95.68 E-value=0.0016 Score=35.86 Aligned_cols=437 Identities=12% Similarity=0.039 Sum_probs=157.7 Q ss_pred cCCCCCccceeeeeeecCCCCCeeeecccCceEEEE-cCc-eEEeccc--ccCCcceEEEEecccccc-ccccchhhhhh Q lcl|Aclame:pro 262 RGVSANTEYIRFRQVNLNPESPNYIERVIGNMTFEF-DGE-RIVTGGE--YPNQVPFLRVVVSQDIKQ-NVAGVEKWVPV 336 (742) Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~-~~vtG~~--~~n~~p~L~~si~~~~~~-~~ag~s~~ip~ 336 (742) --|-+ ++ |+.+|. |++.-.... .+. ++++... +++++ +.|+-.+++.. +|..... -. T Consensus 1 mip~s--~i-----V~V~~~-------v~~~~~~~~~~~~~l~l~~~~~~~~~r~--~~y~s~~~V~~~FG~~S~e--y~ 62 (504) T protein:vir:96 1 MISQS--RY-----IRIISG-------VGAGAPVAGRKLILRVMTTNNVIPPGIV--IEFDNANAVLSYFGAQSEE--YQ 62 (504) T ss_pred CCCcc--ce-----eEeeec-------ccccccccccccceeEeecccCCCccce--EEecCHHHHHHhcCCChHH--HH Confidence 00000 11 222222 222211111 222 2332221 13443 56665556554 3432211 11 Q ss_pred hhhhheec-ccceEEEEEEEEEeeecccccc-ccc--hhhheeeeecccccceeeeee--cccccccccccccceeeecc Q lcl|Aclame:pro 337 GFEGIYSV-GDFTVIVNELTNVSIPVTDSAI-IPP--MRFTRIEQITLSGGASFSVIS--NQPYGFNIQDSRHSYWLSPF 410 (742) Q Consensus 337 al~aI~av-g~~tv~v~~itnv~~p~tdsa~-vp~--~~~~li~~~~l~~ga~~~vl~--~~~~~~~i~~s~~~~~Ls~l 410 (742) +-..-|.. -..+..+..+.......+.... +-+ ....+........| ++++.. .++...++..+.... + T Consensus 63 aA~~yF~~~~~~~~~P~~l~igR~~~~a~~~~l~g~~~~~~~~~~~~i~~G-~lsitv~G~~~~~~~i~~S~~ts----~ 137 (504) T protein:vir:96 63 RAAAYFKFISKSVNSPSSISFARWVNTAIAPMVVGDNLPKTIADFAGFSAG-VLTIMVGAAEKNITAIDTSAATS----M 137 (504) T ss_pred HHHHHhhcCCCCCccccEEEEEeecCcCccceEEechhHHHHHHHhhhhce-EEEEEEcceeeeecccccccccc----h Confidence 11111111 1112223333222222111110 000 01111111111212 122111 111111111111110 0 Q ss_pred CCcceeeecccccc----------ccc-ccceeEeecccccccccceeeeccCCcceEEEecCCcccccccccccccccc Q lcl|Aclame:pro 411 KDDELIIGTELVLP----------ALD-VSTEFGVSSWEEALPEFSFLMPFQGGSDGYIRVDENEPDTIGRVKITPALLA 479 (742) Q Consensus 411 ~d~s~~v~td~~a~----------a~d-~s~~v~l~~~~~~~p~a~~av~l~gGtdg~i~vd~~~~~~ig~~~~~~~~~a 479 (742) .+........+-+. ..+ ....+.+.+............... +.+-...+........ ..... .... T Consensus 138 ~~vA~~i~~al~~~~~~~~~~~tv~~d~~~~~f~its~~tg~~~~~~~~~a~-~~~~~~~lgl~~~~~~-~v~g~-~aet 214 (504) T protein:vir:96 138 DNVASIIQTEIRKNTDPQLAQATVTWNPNTNQFTLVGATIGTGVLAVAKSAD-PQDMSTALGWSTSNVV-NVAGQ-AADL 214 (504) T ss_pred HHHHHHHHhhhhcccccccccceEEEeccCCeEEEEeeccccceeEEEeecc-ccchhhhhhcccccce-EEeec-cccc Confidence 00000000000000 000 001111111111110000000000 0000000000000000 00000 0011 Q ss_pred chhhHHHhhccC-C-ccEEEEcCCCchHHHHHHHHHHHhhcCceEEEE-ECCCCCChHHHHHHHHhccCCcEEEEEecce Q lcl|Aclame:pro 480 NYERLLPLLTED-Q-FDLVLTPYLTFADHAGTVNAFINRAENRFLYLF-DIAGDDDTENLAISLAGYINSSFATTFFPWV 556 (742) Q Consensus 480 ~rtGL~AL~~~d-~-v~LL~aPg~t~s~v~aal~Al~a~a~~R~~aI~-D~p~~~~t~~~A~a~r~~~~S~~aaL~~PwV 556 (742) .-+.|.++.... + ..+..+......+..-++.++++..+.++.... +-... ..+ ..............+++.. T Consensus 215 ~~~al~al~~~~~~Wy~f~~a~~~~~dd~ilalA~w~ea~~~~~~~~~~~~~~~--~~~-~~~~~~~~~~~~~~~~~~~- 290 (504) T protein:vir:96 215 PDAAVAKSTNVSNNFGSFLFAGATLDNDQIKAVSAWNAAQNNQFIYTVATSLAN--LGA-LFDLVKGNSGTALNVLSAT- 290 (504) T ss_pred HHHHHHHHHhhcCCeEEEEEEeccCCHHHHHHHHHHHhhcCceEEEEEeecccc--hhh-HHHhhhhcceeEEEEeecC- Confidence 122344444332 2 223333222222222334444444344443322 21111 111 1111111111112222111 Q ss_pred eeccccceeEechHHHHHHHHhhhccC--ce-eecCCceeeEeeeccccchhHHhhhcCCceEEEEc-CC--CEEEEcce Q lcl|Aclame:pro 557 RRLTNKGMRTVPASLAAYRSIRTTDPE--TG-LAPVGARRGVVTGEPVRQVDWEDLYNNRINPIVRV-GN--DVLLFGQK 630 (742) Q Consensus 557 kv~d~~~~~~vPpSgavAGl~ArtD~e--~G-v~~SPaN~~I~~~~~ls~sE~d~LN~~GINtI~~f-g~--G~rlWGnR 630 (742) ++ .. -++.+.++.++.+|-+ .| ..+.-...+-+....++..|.+.|..+++|++..+ +. .+.+|-.- T Consensus 291 ---~~---~~-~~~~~~~~~~as~~f~~~ng~~T~~fk~l~GVta~~lt~t~~~aL~~~~~N~y~~~a~~~~~~~~~~~G 363 (504) T protein:vir:96 291 ---AS---ND-FVEQCPSEILAATNYDEPGASQNYMYYQFPGRNITVSDDTAANTVDKSRGNYIGVTQANGQQLAFYQRG 363 (504) T ss_pred ---cc---ch-hHHHHHHHHHHhcCcCcccccccccccccCCcCcccCCHHHHHHHHhcCCeEEEEeecccceeeEEecC Confidence 11 11 1344456666666532 22 11111122222334578899999999999999877 33 35666443 Q ss_pred ecCCCccccceeehhhhhHHHHHHHHHHHHHhhcc----cCCHHHHHHHHHHHHHHHHHHHhCCceee------------ Q lcl|Aclame:pro 631 TMLNVNSALNRINVRRLLIVMRNRISQILSSYLFE----NNTSENRLRAEALVRQYLESLRLRGAVTD------------ 694 (742) Q Consensus 631 Tlas~D~~wrfInVRR~~d~Ie~sI~~a~~~~VfE----PNd~~l~~~V~~sInafL~~L~~~GAL~G------------ 694 (742) .+.+-..+|.+|.+-+-.+|++..|+..+....-. |.|..-...|+..|+.-|++-+++|.|.- T Consensus 364 ~~~gG~~~~~wiDv~~~~~WL~~~lq~~l~~l~~~~~kIPyt~~Gi~~l~a~i~~vl~~av~~G~I~~Gv~~~~~q~~~I 443 (504) T protein:vir:96 364 ILCGGPTDAVDMNVYANEIWLKSAIAQALLDLFLNVNAVPASMVGEAMTLAVLQPVLDKATSNGTFTYGKDISAVQQQYI 443 (504) T ss_pred eeeCCccccchhhhhhhHHHHHHHHHHHHHHHHhcCCCcccCHhhHHHHHHHHHHHHHHHHhcceeccCccCCccchhee Confidence 33332335777999999999999999998875433 66899999999999999999999998742 Q ss_pred -----------------EEEEEc--CCCCHHHhhC-CEEEEEEEEEecCCceEEEEEEEEe Q lcl|Aclame:pro 695 -----------------YEVAID--SVTTPTDIDN-NTLRARVTVQPARSIEYIDITFVIT 735 (742) Q Consensus 695 -----------------f~V~~D--etNtp~dI~~-GrL~i~I~vaP~~PAEfI~l~f~it 735 (742) |.|.++ .+.+++|..+ +-..+.+.++--..+++|++.-+.- T Consensus 444 ~~~~~~d~~~~~~~~~GYyv~~~~~s~~s~~~r~~R~~~~~~~~y~~~gaI~~v~~~~~~v 504 (504) T protein:vir:96 444 TQITGDRRAWRQVQTLGYWINITFSSYTNSNTGLTEWKANYTLIYSKGDAIRFVEGSDVMI 504 (504) T ss_pred cccccccccccceeccceEEEecChhccChhHhhhccccceEEEEEECCeEEEEEeccccC Confidence 445543 1233333322 3334444445555566655433322 No 63 >protein:vir:3636 Length: 501 # NCBI annotation: gp04 # Family: family:all:396 # MgeID: mge:75 # MgeName: Bcep781 # Cross-refs: genbank:acc:NP_705631;genbank:gi:23752316;genbank:GeneID:955753 Probab=94.46 E-value=0.0044 Score=33.52 Aligned_cols=436 Identities=11% Similarity=0.056 Sum_probs=166.3 Q ss_pred EEEeeccCCCCCccceeeeeeecCCCCCeeeecccCceEEEEcCceEEecc--cccCCcceEEEEecccccc-ccccc-h Q lcl|Aclame:pro 256 VHFRDIRGVSANTEYIRFRQVNLNPESPNYIERVIGNMTFEFDGERIVTGG--EYPNQVPFLRVVVSQDIKQ-NVAGV-E 331 (742) Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vtG~--~~~n~~p~L~~si~~~~~~-~~ag~-s 331 (742) ..|.+| |- .++++. ++.+.|..+.. ....| ++++.. .+++++ +.|+-.+++.. +|... + T Consensus 1 m~~~~i--p~--s~iV~V-~~~v~~~~~~~---------~~~~~-lllt~~~~~~~~r~--~~y~s~~~V~~~FG~~S~e 63 (501) T protein:vir:36 1 MPTTTI--PI--DQIVQM-LPGVIGAGGAP---------GRLTG-LVLTQDTSVQPGQL--ADFFQETDVENWFGALSNE 63 (501) T ss_pred CCcCCc--cc--ceEEEE-eeeeccCCCcc---------eeeee-EEEeccCCCCCcce--eeecCHHHHHHhcCCChHH Confidence 111111 00 111100 33333433322 22222 344332 244554 66766666665 34422 2 Q ss_pred hh-hhhhhhhheecccceEEEEEEEEEeeecccc-ccccch---hhheeeeecccccceeeeeeccc-ccccccccccce Q lcl|Aclame:pro 332 KW-VPVGFEGIYSVGDFTVIVNELTNVSIPVTDS-AIIPPM---RFTRIEQITLSGGASFSVISNQP-YGFNIQDSRHSY 405 (742) Q Consensus 332 ~~-ip~al~aI~avg~~tv~v~~itnv~~p~tds-a~vp~~---~~~li~~~~l~~ga~~~vl~~~~-~~~~i~~s~~~~ 405 (742) .. +-.-+.++... +-.+..+.......+.. ..+.+. ...+.....+++ ++.+..+.. ...++..+... T Consensus 64 y~aA~~yFs~~~~q---~~~P~~l~igR~~~~a~~~~l~g~~l~~~~~a~~~~~sg--~l~vti~g~~~~~~i~lS~~t- 137 (501) T protein:vir:36 64 AKIADAYFPGIVNG---GQLPYDLKFARYVAADAPASVYGIPLTGVTLAQLQGYSG--TLTVTTAAQHVSANISLAAAT- 137 (501) T ss_pred HHHHHHHhhcccCC---CccccEEEEEeecCcCcceeEeccchhhhhhhhccceeE--EEEEEecceeeeeeccccccc- Confidence 11 21112111111 11222222222211111 111110 001111111221 122211110 01111111110 Q ss_pred eeeccCCcceeeeccccccc----cc-ccceeEeecccccccccceeeeccCCcceE--EEecCCccccccccccccccc Q lcl|Aclame:pro 406 WLSPFKDDELIIGTELVLPA----LD-VSTEFGVSSWEEALPEFSFLMPFQGGSDGY--IRVDENEPDTIGRVKITPALL 478 (742) Q Consensus 406 ~Ls~l~d~s~~v~td~~a~a----~d-~s~~v~l~~~~~~~p~a~~av~l~gGtdg~--i~vd~~~~~~ig~~~~~~~~~ 478 (742) .+.+....+...+-++. .+ ....+.+...+.... .......++++.- ..+....+..+-..+ .... T Consensus 138 ---s~~~vA~~i~~al~~~~~tv~~d~~~~~f~i~s~t~G~~--~~i~~~t~~~~ia~~l~Lt~~~~a~v~~~g--~~~e 210 (501) T protein:vir:36 138 ---SFANAATLIEAAFTSPDFVVAYDALRNRFTVVTNATGTA--AAISAVTGTNNFADEIGLSAAAGATLQAAG--VAAD 210 (501) T ss_pred ---CHHHHHHHHhhhhcCcceEEEEcCcceeEEEEeccCCcc--eeeEeeecccchhhhhcccccCcceEEecc--cccc Confidence 00000000000000000 00 011111111111110 0000011111100 001111000000000 0001 Q ss_pred cchhhHHHhhccC-Cc-cEEEEcCCCchHHHHHHHHHHHhhcCceEEEE-ECCCC---CChHHHHHHHHhccCCcEEEEE Q lcl|Aclame:pro 479 ANYERLLPLLTED-QF-DLVLTPYLTFADHAGTVNAFINRAENRFLYLF-DIAGD---DDTENLAISLAGYINSSFATTF 552 (742) Q Consensus 479 a~rtGL~AL~~~d-~v-~LL~aPg~t~s~v~aal~Al~a~a~~R~~aI~-D~p~~---~~t~~~A~a~r~~~~S~~aaL~ 552 (742) .--+.|.++.... +. .+..+...++++.. ++.+.++..+.++.+.. +.... ....+.........+..|.... T Consensus 211 t~~~al~a~~~~s~~Wy~f~~a~~~~~~~~l-a~A~wiea~~~~f~~~~~~~~~~~~~~~~~~~i~~~l~~~~y~~t~~~ 289 (501) T protein:vir:36 211 TPASAMNRAVGLSRNWATFTTAWTAVIADRL-AFASWNSGQAYKYMYVAPDLEAASIVSNNAASFGAQVFAAPYQGTLPL 289 (501) T ss_pred cHHHHHHHHHhccCceEEEEEecCCChHHHH-HHHHHHhhcCceEEEEEecCchhhhhccchhhHHHHHHhcCCCcEEEE Confidence 1123455554432 22 34455554444433 44555554444544332 11110 0011111112222333444444 Q ss_pred ecceeeccccceeEechHHHHHHHHhhhccCc--e-eecCCce-eeEeeeccccchhHHhhhcCCceEEEEc---CCCEE Q lcl|Aclame:pro 553 FPWVRRLTNKGMRTVPASLAAYRSIRTTDPET--G-LAPVGAR-RGVVTGEPVRQVDWEDLYNNRINPIVRV---GNDVL 625 (742) Q Consensus 553 ~PwVkv~d~~~~~~vPpSgavAGl~ArtD~e~--G-v~~SPaN-~~I~~~~~ls~sE~d~LN~~GINtI~~f---g~G~r 625 (742) |.. ..+.+++.|..|.+|-+. | ..+.-+. .+......++..|.+.|..+|+|++..+ +..+. T Consensus 290 y~~-----------~~~~aa~~g~~as~nf~~~~g~~T~~fkq~~~Gi~a~~l~~t~a~al~~~~~N~y~~~~~~~~~~~ 358 (501) T protein:vir:36 290 YGD-----------QATAGAVMGYAASINFQLRNGRTVLAFRQFNAGVPATVHDLPTANALRSNNYTYIGAYANAANNYT 358 (501) T ss_pred cCC-----------CCHHHHHHHHHHhcCcccCcceeeeeccccCCCcCcCcCCHHHHHHHHhcCCcEEEEEecccceee Confidence 321 124566777777776432 2 2222221 1222334577899999999999998765 24577 Q ss_pred EEcceecCCCccccceeehhhhhHHHHHHHHHHHHHhhcc----cCCHHHHHHHHHHHHHHHHHHHhCCceee------- Q lcl|Aclame:pro 626 LFGQKTMLNVNSALNRINVRRLLIVMRNRISQILSSYLFE----NNTSENRLRAEALVRQYLESLRLRGAVTD------- 694 (742) Q Consensus 626 lWGnRTlas~D~~wrfInVRR~~d~Ie~sI~~a~~~~VfE----PNd~~l~~~V~~sInafL~~L~~~GAL~G------- 694 (742) +|-.-++++ .|.||.+.+-.+|++..++..+....-. |.|..-...|+..|+.-|++-+++|.|.- T Consensus 359 ~~~~G~~sG---~~~wiD~~~g~dWL~~~iq~~l~~ll~~~~KIPytd~G~~~l~a~i~~~l~~av~nG~I~~Gv~~~~~ 435 (501) T protein:vir:36 359 IAYDGKLSG---KFLWVDTYLDQIYLNAELQRAEFEAMLAYNSLPYNEDGYTGLYRAGVDVIDAAVTSGIIRAGVTLTNS 435 (501) T ss_pred EEEcCeeec---cchhhhHHHhHHHHHHHHHHHHHHHHhcCCCCccChhhHHHHHHHHHHHHHHHHhCceeecCCCCCcc Confidence 776555544 3567999999999999999998875543 67888999999999999999999999852 Q ss_pred ----------------------EEEEEcC-CCCHHHhhC-CEEEEEEEEEecCCceEEEEEEEEee Q lcl|Aclame:pro 695 ----------------------YEVAIDS-VTTPTDIDN-NTLRARVTVQPARSIEYIDITFVITP 736 (742) Q Consensus 695 ----------------------f~V~~De-tNtp~dI~~-GrL~i~I~vaP~~PAEfI~l~f~it~ 736 (742) |.+..+. +.++++..+ ....+.+.++--..+++|++-..--- T Consensus 436 q~~~I~~~~g~~~~~~~v~~~Gyy~~~~~~~~~~~~R~~R~~p~~~~~y~~~gaIh~v~i~s~~v~ 501 (501) T protein:vir:36 436 QLQQIDKAARVAGAGQLVQTRGWYFLIGDPANPGQARQNRTTPACTLWYSDGGSIQSLTIGSNAVI 501 (501) T ss_pred cceeecccccccccccceeccceEEeeCcccCChhhhhhcccCcEEEEEEeCCceeEEEeeeeeeC Confidence 2222221 122222211 22233333333444444432111000 No 64 >protein:vir:101576 Length: 501 # NCBI annotation: gp04 # Family: family:all:396 # MgeID: mge:1477 # MgeName: Bcep43 # Cross-refs: genbank:acc:NP_958108;genbank:gi:41057654;genbank:GeneID:2716834 Probab=90.05 E-value=0.023 Score=29.57 Aligned_cols=436 Identities=11% Similarity=0.061 Sum_probs=161.8 Q ss_pred EEEeeccCCCCCccceeeeeeecCCCCCeeeecccCceEEEEcCceEEeccc--ccCCcceEEEEeccccccc-ccc-ch Q lcl|Aclame:pro 256 VHFRDIRGVSANTEYIRFRQVNLNPESPNYIERVIGNMTFEFDGERIVTGGE--YPNQVPFLRVVVSQDIKQN-VAG-VE 331 (742) Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vtG~~--~~n~~p~L~~si~~~~~~~-~ag-~s 331 (742) .-|.+| |- .+++++ ++.++|..+. ..++.| ++++... ++++. ++|+-.+++..+ |.. .+ T Consensus 1 m~~~~i--p~--s~iV~V-~~~v~~~~~~---------~~~~~~-l~l~~~~~~~~~~~--~~~~s~~~V~~~FG~~S~e 63 (501) T protein:vir:10 1 MPTTTI--PI--DQIVQM-LPGVIGAGGA---------PGRLTG-LVLTQDTSVQPGQL--ADFFQETDVENWFGALSNE 63 (501) T ss_pred CCCCCc--cc--ceEEEE-eeecccCCCc---------ccccee-EEEeccCCCCccce--EEecCHHHHHHhcCCChHH Confidence 111110 00 111100 3333343222 222333 3444432 33444 778776777653 442 22 Q ss_pred hh-hhhhhhhheecccceEEEEEEEEEeeecccc-ccccch---hhheeeeecccccceeeeeeccc-ccccccccccce Q lcl|Aclame:pro 332 KW-VPVGFEGIYSVGDFTVIVNELTNVSIPVTDS-AIIPPM---RFTRIEQITLSGGASFSVISNQP-YGFNIQDSRHSY 405 (742) Q Consensus 332 ~~-ip~al~aI~avg~~tv~v~~itnv~~p~tds-a~vp~~---~~~li~~~~l~~ga~~~vl~~~~-~~~~i~~s~~~~ 405 (742) .. +-.-+.+|... +-.+..+.....+.+.. ..+.+. ...+.....+++ ++.+..+.. ...++..+... T Consensus 64 y~aA~~yFsg~~~q---~p~P~~l~igR~~~~~~~~~l~g~~l~~~~la~~~~~sg--~l~vti~g~~~~~~i~ls~at- 137 (501) T protein:vir:10 64 AKIADAYFPGIVNG---GQLPYDLKFARYVAADAPASVYGIPLTGVTLAQLQGYSG--TLTVTTAAQHVSANISLAAAT- 137 (501) T ss_pred HHHHHHHhhhhcCC---CccccEEEEEeecCCCccceEeccchhhhhhhhcceeee--EEEEeeccceeeccccccccc- Confidence 11 22222222111 22222222222221111 111110 001111112221 122211110 01111111110 Q ss_pred eeeccCCcceeeeccccccc----cc-ccceeEeecccccccccceeeeccCCcceE--EEecCCccccccccccccccc Q lcl|Aclame:pro 406 WLSPFKDDELIIGTELVLPA----LD-VSTEFGVSSWEEALPEFSFLMPFQGGSDGY--IRVDENEPDTIGRVKITPALL 478 (742) Q Consensus 406 ~Ls~l~d~s~~v~td~~a~a----~d-~s~~v~l~~~~~~~p~a~~av~l~gGtdg~--i~vd~~~~~~ig~~~~~~~~~ 478 (742) .+.+........+-... .+ ....+.+........ .+.. ...++++.- ..+....+......+. ... T Consensus 138 ---s~~~vAs~i~~al~~~~~tv~~d~~~~~f~its~ttG~~-~~i~-~~~~~~~la~~l~Lt~~~~a~v~~~g~--~ae 210 (501) T protein:vir:10 138 ---SFANAATLIEAAFTSPDFVVAYDALRNRFTVVTNATGTA-AAIS-AVTGTNNLADELGLSAAAGATLQAAGV--AAD 210 (501) T ss_pred ---CHHHHHHHHhhhccCCceEEEEcccCceEEEEeeccCCc-eeEE-EeeCchhhhhhcCccccccceEEecCc--ccc Confidence 00000000000000000 00 001111111111100 0000 001111100 0011100000000000 001 Q ss_pred cchhhHHHhhccC-Cc-cEEEEcCCCchHHHHHHHHHHHhhcCceEEEE-ECCCCC---ChHHHHHHHHhccCCcEEEEE Q lcl|Aclame:pro 479 ANYERLLPLLTED-QF-DLVLTPYLTFADHAGTVNAFINRAENRFLYLF-DIAGDD---DTENLAISLAGYINSSFATTF 552 (742) Q Consensus 479 a~rtGL~AL~~~d-~v-~LL~aPg~t~s~v~aal~Al~a~a~~R~~aI~-D~p~~~---~t~~~A~a~r~~~~S~~aaL~ 552 (742) .--+.+.++.... +. .+..+...++++.. ++.+.++..+.++.+.. +..... ...+.........+..+...+ T Consensus 211 t~~~a~~a~~~~~~~Wy~f~~a~~~~~~~~l-a~A~wiea~~~~f~~~~~~~~~~~~~~~~~~~i~~~l~~~~y~~t~~~ 289 (501) T protein:vir:10 211 TPASAMNRAVGLSRNWATFTTAWTAVIADRL-AFAAWNSGQAYKYMYVAPDLEAASIVTNNAASFGAQVFAAPYQGTLPL 289 (501) T ss_pred cHHHHHHHHHhccCceEEEEEecCCChHHHH-HHHHHHHhcCceEEEEEecCchhhhhhhhhhhHHHHHHhcCCCceEEE Confidence 1123444444332 11 23334333333333 34445554444543332 211100 011111111122233445544 Q ss_pred ecceeeccccceeEechHHHHHHHHhhhccC--ce-eecCCcee-eEeeeccccchhHHhhhcCCceEEEEc-C--CCEE Q lcl|Aclame:pro 553 FPWVRRLTNKGMRTVPASLAAYRSIRTTDPE--TG-LAPVGARR-GVVTGEPVRQVDWEDLYNNRINPIVRV-G--NDVL 625 (742) Q Consensus 553 ~PwVkv~d~~~~~~vPpSgavAGl~ArtD~e--~G-v~~SPaN~-~I~~~~~ls~sE~d~LN~~GINtI~~f-g--~G~r 625 (742) |+. ..+.+++.|..|.+|-+ .| +.+.-+.. +......++..|.+.|..+|+|+...+ + ..+. T Consensus 290 y~~-----------~~~~aa~~g~~as~nf~~~~g~~T~~fkq~~~Gi~a~~lt~t~a~al~~~~~N~y~~~~~~~~~~~ 358 (501) T protein:vir:10 290 YGD-----------QATAGAVMGYAASINFQLRNGRTVLAFRQFNAGVPATAHDLPTANALRSNNYTYIGAYANAANNYT 358 (501) T ss_pred CCC-----------CcHHHHHHHHHHhhCcccCccceeeeccccCCCcCcccCCHHHHHHHHhcCCeEEEEeccccceee Confidence 431 12456667777777643 22 22222111 122334578899999999999999887 2 3477 Q ss_pred EEcceecCCCccccceeehhhhhHHHHHHHHHHHHHhhcc----cCCHHHHHHHHHHHHHHHHHHHhCCceee------- Q lcl|Aclame:pro 626 LFGQKTMLNVNSALNRINVRRLLIVMRNRISQILSSYLFE----NNTSENRLRAEALVRQYLESLRLRGAVTD------- 694 (742) Q Consensus 626 lWGnRTlas~D~~wrfInVRR~~d~Ie~sI~~a~~~~VfE----PNd~~l~~~V~~sInafL~~L~~~GAL~G------- 694 (742) +|-.-++++ .|.+|.+-+-.+|+++.++..+....-. |.|..-...|+..|+.-|++-+++|.|.- T Consensus 359 ~~~~G~~sG---~~~wiD~~~~~~Wl~~~iq~~l~~ll~~~~kIPyt~~G~~~l~a~v~~~l~~av~nG~I~~Gv~l~~~ 435 (501) T protein:vir:10 359 IAYDGKLSG---KFLWVDTYLDQIYLNAELQRAEFEAMLAYNSLPYNEDGYTALYRAGVDVIDAAVTSGIIRAGVTLTNS 435 (501) T ss_pred EEecCeeec---cceeehhhhhHHHHHHHHHHHHHHHHHhcCCcccCHHHHHHHHHHHHHHHHHHHhCceeecCCCCCcc Confidence 885555544 3667888888888888888887764432 77899999999999999999999999853 Q ss_pred ----------------------EEEEEcC-CCCHHHhhC-CEEEEEEEEEecCCceEEEEEEEEee Q lcl|Aclame:pro 695 ----------------------YEVAIDS-VTTPTDIDN-NTLRARVTVQPARSIEYIDITFVITP 736 (742) Q Consensus 695 ----------------------f~V~~De-tNtp~dI~~-GrL~i~I~vaP~~PAEfI~l~f~it~ 736 (742) |.+..+. +.++++..+ ....+.+.++--..+++|++-..--- T Consensus 436 q~~~i~~~~g~~~~~~~v~~~Gyy~~~~~~~~~~~~R~~R~~p~~~~~y~~~gaIh~v~i~s~~v~ 501 (501) T protein:vir:10 436 QLQQIDAAAGVAGAGQLVQTRGWYFLIGDPANPGQARQNRTTPACTLWYSDGGSIQQLTIGSNAVI 501 (501) T ss_pred cceeeccccCccccccceeccceeEeeccccCChhhhhhccccceEEEEEeCCceeEEEeeeeecC Confidence 2222221 122222111 11223333333333333332111000 No 65 >protein:vir:99586 Length: 507 # NCBI annotation: hypothetical protein # Family: family:all:396 # MgeID: mge:1544 # MgeName: BcepF1 # Cross-refs: genbank:acc:YP_001039795;genbank:gi:126011045;genbank:GeneID:4818281 Probab=89.32 E-value=0.027 Score=29.18 Aligned_cols=436 Identities=11% Similarity=0.034 Sum_probs=149.8 Q ss_pred cCCCCC--eeeecccCceEE-E-EcCceEEeccc--ccCCcceEEEEeccccccc-cccchhhhhhhhhhheec-ccceE Q lcl|Aclame:pro 278 LNPESP--NYIERVIGNMTF-E-FDGERIVTGGE--YPNQVPFLRVVVSQDIKQN-VAGVEKWVPVGFEGIYSV-GDFTV 349 (742) Q Consensus 278 ~~~~~~--~~~~~~~~~~~~-~-~~g~~~vtG~~--~~n~~p~L~~si~~~~~~~-~ag~s~~ip~al~aI~av-g~~tv 349 (742) |=|-|- ++...|.+..-. . +.--+++|... +++++ +.|+-.+++..+ |..... -++-..-|.. -..+. T Consensus 1 mip~s~iVnV~~~v~~~a~~~~~~~~~lilt~~~~~~~~r~--~~y~s~~~V~~~FG~~S~e--y~aA~~yFsq~p~~~~ 76 (507) T protein:vir:99 1 MISQSRYVRIVSGVGAGAPVAQRRLIMRVMTTNAVLPPGVV--FESSSADAVGAYFGMASEE--YKRAKAYMSFISKSIN 76 (507) T ss_pred CCCccceeEEeeeccccCcccccccceeeeccccCCCccce--EeecCHHHHHHhcCCChHH--HHHHHHHhccCCCCCc Confidence 222210 111122222111 1 11112222211 22343 566655565542 332111 1111112221 11122 Q ss_pred EEEEEEEEeeecccc-ccccch--hhheeeeecccccceeeeeec--ccccccccccccceeeeccCCcceeeecccccc Q lcl|Aclame:pro 350 IVNELTNVSIPVTDS-AIIPPM--RFTRIEQITLSGGASFSVISN--QPYGFNIQDSRHSYWLSPFKDDELIIGTELVLP 424 (742) Q Consensus 350 ~v~~itnv~~p~tds-a~vp~~--~~~li~~~~l~~ga~~~vl~~--~~~~~~i~~s~~~~~Ls~l~d~s~~v~td~~a~ 424 (742) .+..+....-+.+.. +.+.+. ...+........| .+++..+ .+...++..+... .+.+........+-+. T Consensus 77 ~P~~L~igR~~~~~~~a~l~g~~~~~~l~~~~~~~~G-~lti~v~G~~~t~~~i~lS~~t----s~~~vAs~i~~~l~a~ 151 (507) T protein:vir:99 77 SPSYISFARWVNAAIASMIVGDSLVKNLPALKAVATP-TLSLSIGGTVVPIAGIDLTAAL----TLTDVAATLQTKIRAS 151 (507) T ss_pred ccceEEEEeecCccccceeecchhhhhHHHHhhhcce-eEEEEEcCceeEeccccccccC----CHHHHHHHHHHhhhcc Confidence 223332233222211 111111 0011111111111 1222111 1111111111100 0000000000000000 Q ss_pred ----------cccc-cceeEeeccccc-ccccceeeeccCCcceEEEecCCccccccccccccccccchhhHHHhhcc-C Q lcl|Aclame:pro 425 ----------ALDV-STEFGVSSWEEA-LPEFSFLMPFQGGSDGYIRVDENEPDTIGRVKITPALLANYERLLPLLTE-D 491 (742) Q Consensus 425 ----------a~d~-s~~v~l~~~~~~-~p~a~~av~l~gGtdg~i~vd~~~~~~ig~~~~~~~~~a~rtGL~AL~~~-d 491 (742) ..+. ...+.+.+...+ ............|++.-..+.......+ ...+. ....--+.+.++... . T Consensus 152 ~~~~~~~~tv~~d~~~~~F~v~s~~tG~~s~i~~at~~~~gt~~s~l~~~~~~~a~-~~~g~-~aet~~~a~~a~~~~~~ 229 (507) T protein:vir:99 152 ANAELATATVTFNTTTNQFVLNGTTTGALAPTITAVRTDPATDISSLLGWTNTGTV-FVKGQ-AAETPDTSISKSAAIST 229 (507) T ss_pred ccccccceEEEEecCCceEEEEeeeccccceeEEEEcCCchhhHHHHhccccccce-Eeecc-cccCHHHHHHHHHhhcC Confidence 0000 000111100000 0000000000001000000000000000 00000 000011223333221 1 Q ss_pred Cc-cEEE--EcCCCchHHHHHHHHHHHhhcCceEEEEECCCCCChHHHHHHHHhccCCcEEEEEecceeeccccceeEec Q lcl|Aclame:pro 492 QF-DLVL--TPYLTFADHAGTVNAFINRAENRFLYLFDIAGDDDTENLAISLAGYINSSFATTFFPWVRRLTNKGMRTVP 568 (742) Q Consensus 492 ~v-~LL~--aPg~t~s~v~aal~Al~a~a~~R~~aI~D~p~~~~t~~~A~a~r~~~~S~~aaL~~PwVkv~d~~~~~~vP 568 (742) +. .+.. .|..++++ .-++.+.++..+.|+........ .... ................+.+ ....-. T Consensus 230 nW~~~~~a~~~~~td~~-~lalA~wiea~~~~f~~~~~~~~-a~~~--~~~~~~~~~~~~~~~~~~~-------~~~~~~ 298 (507) T protein:vir:99 230 NFGSFIYTSTPALTNDQ-ITAVASWNASQNNMYMYSVPTTI-ANIG--TLYAAVKGFSGCALNITSD-------SLPVDY 298 (507) T ss_pred CeEEEEEEeccccChHH-HHHHHHHHhhcCcEEEEEEecCc-hhhh--hhhhhhhhcceeEEEeecc-------cccchh Confidence 11 1111 12222222 12223333322333322211110 0000 0000000000011111111 000112 Q ss_pred hHHHHHHHHhhhccC--ce-eecCCceeeEeeeccccchhHHhhhcCCceEEEEc-C--CCEEEEcceecCCCcccccee Q lcl|Aclame:pro 569 ASLAAYRSIRTTDPE--TG-LAPVGARRGVVTGEPVRQVDWEDLYNNRINPIVRV-G--NDVLLFGQKTMLNVNSALNRI 642 (742) Q Consensus 569 pSgavAGl~ArtD~e--~G-v~~SPaN~~I~~~~~ls~sE~d~LN~~GINtI~~f-g--~G~rlWGnRTlas~D~~wrfI 642 (742) +.+.+.|.+|.+|-+ +| ..+.-...+-+....++..|.+.|..+++|+...+ + ..+.+|-.-.+.+-..+|.++ T Consensus 299 ~~aa~~g~~as~nf~~~ng~~T~~fk~l~GV~a~~lt~t~a~al~~~n~N~y~~~a~~~~~~~~~~~G~~~gG~~~fid~ 378 (507) T protein:vir:99 299 IEQSPCEILAATDYTRVNATQNYMYYQFPSRNITVSDDTTANLVDANRGNYIGQTQSAGQSLAFYQRGILCGGPNDAVDM 378 (507) T ss_pred HHHHHHHHHHhhccCcCccceeecccccCCcccccCCHHHHHHHHhcCCeEEEEeccccceeeEEecCeeeCCcccceee Confidence 456667777777632 22 22222222223344678899999999999999887 3 347776654443433367777 Q ss_pred ehhhhhHHHHHHHHHHHHHhhcc----cCCHHHHHHHHHHHHHHHHHHHhCCceee------------------------ Q lcl|Aclame:pro 643 NVRRLLIVMRNRISQILSSYLFE----NNTSENRLRAEALVRQYLESLRLRGAVTD------------------------ 694 (742) Q Consensus 643 nVRR~~d~Ie~sI~~a~~~~VfE----PNd~~l~~~V~~sInafL~~L~~~GAL~G------------------------ 694 (742) .+-+=.+|++..++..+....-. |-|..-...|+..|+.-|++-+++|.|.- T Consensus 379 d~~~~~~WL~~~iq~~l~~l~~~~~kIPyt~~G~~~l~a~i~~~l~~av~nG~I~~Gvtl~~~q~~~in~~~~~~~~~~~ 458 (507) T protein:vir:99 379 NIYANEIWLKSAISAQILSLFLNVPRVPANETGESMLLSVIQSVVNTAKNNGTISAGKNLNVIQQQYITQISGDANAWRQ 458 (507) T ss_pred eeecchHHHHHHHHHHHHHHHhcCCCCccChhhHHHHHHHHHHHHHHHHhccccccCCcccccchheecccccccccccc Confidence 77777788888888888764332 67889999999999999999999998853 Q ss_pred -----EEEEEcC--CCCHHH-hhCCEEEEEEEEEecCCceEEEEEEEEe Q lcl|Aclame:pro 695 -----YEVAIDS--VTTPTD-IDNNTLRARVTVQPARSIEYIDITFVIT 735 (742) Q Consensus 695 -----f~V~~De--tNtp~d-I~~GrL~i~I~vaP~~PAEfI~l~f~it 735 (742) |.+.++. +.++++ ..++...+.+.+.--..+++|++.-..- T Consensus 459 ~~~~Gyy~~~~~~s~~~~~~r~~r~~~~~~~~y~~~gaI~~v~~~~~~v 507 (507) T protein:vir:99 459 VANIGYWLNITFSSYTNPNTQLTEWKASYQLIYSKDDAIRFVEGTDTLI 507 (507) T ss_pred eeccceEEEeCChHhcChhhhhccccceEEEEEEeCCeEEEEEeeeecC Confidence 3333321 123333 2233444444445555555555433322 No 66 >protein:vir:106730 Length: 501 # NCBI annotation: gp04 # Family: family:all:396 # MgeID: mge:1599 # MgeName: Bcep1 # Cross-refs: genbank:acc:NP_944312;genbank:gi:38638611;genbank:GeneID:2657359 Probab=85.72 E-value=0.051 Score=27.68 Aligned_cols=436 Identities=11% Similarity=0.051 Sum_probs=161.6 Q ss_pred EEEeeccCCCCCccceeeeeeecCCCCCeeeecccCceEEEEcCceEEec--ccccCCcceEEEEecccccc-cccc-ch Q lcl|Aclame:pro 256 VHFRDIRGVSANTEYIRFRQVNLNPESPNYIERVIGNMTFEFDGERIVTG--GEYPNQVPFLRVVVSQDIKQ-NVAG-VE 331 (742) Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vtG--~~~~n~~p~L~~si~~~~~~-~~ag-~s 331 (742) ..|.+| |-+.-=+| ++.+++..+. ..++.| ++++. ..++++. +.|+-.+++.. +|.. .+ T Consensus 1 m~~~~i--p~s~iV~V---~~~v~~~~~~---------~~~f~~-lll~~~~~~~~~r~--~~y~s~~~V~~~FG~~S~e 63 (501) T protein:vir:10 1 MPTTTI--PIDQIVQM---LPGVIGAGGA---------PGRLTG-LVLTQDTSVQPGQL--ADFFQKTDVENWFGALSNE 63 (501) T ss_pred CCcCcc--ccceEEEE---eeecccCCCc---------ccccce-EEEecccCCCccce--eeecCHHHHHHhcCCChHH Confidence 111111 00111111 3333333222 223333 23333 2344554 66665566665 3432 22 Q ss_pred hh-hhhhhhhheecccceEEEEEEEEEeeecccc-ccccch---hhheeeeecccccceeeeeecc-cccccccccccce Q lcl|Aclame:pro 332 KW-VPVGFEGIYSVGDFTVIVNELTNVSIPVTDS-AIIPPM---RFTRIEQITLSGGASFSVISNQ-PYGFNIQDSRHSY 405 (742) Q Consensus 332 ~~-ip~al~aI~avg~~tv~v~~itnv~~p~tds-a~vp~~---~~~li~~~~l~~ga~~~vl~~~-~~~~~i~~s~~~~ 405 (742) .. +-.-+.+|.. .+-.+..+....-+.+.. +.+.+. ...+.....+.+ ++.+..+. ....++..+... T Consensus 64 y~aA~~yFsg~~~---q~p~P~~l~igR~~~~~~~~~l~g~~l~~~~la~~~~~~g--~l~i~i~g~~~~~~i~~s~at- 137 (501) T protein:vir:10 64 AKIADAYFPGIVN---GGQLPYDLKFARYVAADAPASVYGIPLTGITLAQLQGYSG--TLTVTTAAQHVSANISLAAAT- 137 (501) T ss_pred HHHHHHHhhhhcC---CCccccEEEEEeecccCccceeeeceehhhhhhhhhheee--EEEEeeccceeeecccccccc- Confidence 11 1111211111 122222222222222111 111110 001111111221 12221111 111111111111 Q ss_pred eeeccCCcceeeeccccccc----cc-ccceeEeecccccccccceeeeccCCcceE--EEecCCccccccccccccccc Q lcl|Aclame:pro 406 WLSPFKDDELIIGTELVLPA----LD-VSTEFGVSSWEEALPEFSFLMPFQGGSDGY--IRVDENEPDTIGRVKITPALL 478 (742) Q Consensus 406 ~Ls~l~d~s~~v~td~~a~a----~d-~s~~v~l~~~~~~~p~a~~av~l~gGtdg~--i~vd~~~~~~ig~~~~~~~~~ 478 (742) .+.+....+...+-.+. .+ ....+.+.....+... .... ..+.++.- ..+....+..+...+. ... T Consensus 138 ---s~~~vA~~i~~al~~~~~tv~~d~~~~~f~i~~~t~G~~~-~i~~-~t~~~d~a~~l~Lt~~~~a~v~~~g~--~ae 210 (501) T protein:vir:10 138 ---SFANAATLIEAAFTSPDFVVAYDALRNRFTVVTNTTGTAA-AISA-VTGTNNLADELGLSAAAGATLQAAGV--AAD 210 (501) T ss_pred ---CHHHHHHHHHHhhcCCceEEEEecccceEEEEecccCcce-eEEE-eeccccchhhhcccccCceeEEecCc--ccc Confidence 00000000000000000 00 0011111111111000 0000 00000000 0000000000000000 001 Q ss_pred cchhhHHHhhccC-Cc-cEEEEcCCCchHHHHHHHHHHHhhcCceEEEE-ECCCC---CChHHHHHHHHhccCCcEEEEE Q lcl|Aclame:pro 479 ANYERLLPLLTED-QF-DLVLTPYLTFADHAGTVNAFINRAENRFLYLF-DIAGD---DDTENLAISLAGYINSSFATTF 552 (742) Q Consensus 479 a~rtGL~AL~~~d-~v-~LL~aPg~t~s~v~aal~Al~a~a~~R~~aI~-D~p~~---~~t~~~A~a~r~~~~S~~aaL~ 552 (742) .--+.|.++.... +. .+..+...++++. -++.+.++..+.|+.... +.... ....+.........+..|...+ T Consensus 211 t~~~Al~a~~~~~~~Wy~f~~a~~~~~~~~-la~A~wi~a~~~~f~~~~~~~~~~~~~~~~~~~i~~~l~~~~y~~t~~~ 289 (501) T protein:vir:10 211 TPASAMNRAVGLSRNWATFTTAWTAVIADR-LAFAAWNSGQAYKYMYVAPDLEAASIVTNNAASFGAQVFAAPYQGTLPL 289 (501) T ss_pred cHHHHHHHHHhcccceEEEEEEecCChHHH-HHHHHHHHhcCceEEEEEecCcceeeecccchhHHHHHHhcCCCceEEE Confidence 1123444444331 21 2333333333332 234444554444443322 22111 0011111111112233444444 Q ss_pred ecceeeccccceeEechHHHHHHHHhhhccCc--e-eecCCce-eeEeeeccccchhHHhhhcCCceEEEEc-C--CCEE Q lcl|Aclame:pro 553 FPWVRRLTNKGMRTVPASLAAYRSIRTTDPET--G-LAPVGAR-RGVVTGEPVRQVDWEDLYNNRINPIVRV-G--NDVL 625 (742) Q Consensus 553 ~PwVkv~d~~~~~~vPpSgavAGl~ArtD~e~--G-v~~SPaN-~~I~~~~~ls~sE~d~LN~~GINtI~~f-g--~G~r 625 (742) |.. ..+++++.|..|.+|-+. | +.+.-.. .+......++..|.+.|..+|+|++..+ + ..+. T Consensus 290 y~~-----------~~~~aa~~g~~as~nf~~~~g~~T~~fkql~~Gv~a~~l~~t~a~al~~~~~N~y~~~~~~~~~~~ 358 (501) T protein:vir:10 290 YGD-----------QATAGAVMGYAASINFQLRNGRTVLAFRQFNAGVPATAHDLPTANALRSNNYTYIGAYANAANNYT 358 (501) T ss_pred CCC-----------CCHHHHHHHHHHhcCcccCcceeeeeecccCCCcCcccCCHHHHHHHHhcCCeEEEEEecccceee Confidence 421 135667788888776432 2 1222211 1222334578899999999999999776 3 3477 Q ss_pred EEcceecCCCccccceeehhhhhHHHHHHHHHHHHHhhcc----cCCHHHHHHHHHHHHHHHHHHHhCCceee------- Q lcl|Aclame:pro 626 LFGQKTMLNVNSALNRINVRRLLIVMRNRISQILSSYLFE----NNTSENRLRAEALVRQYLESLRLRGAVTD------- 694 (742) Q Consensus 626 lWGnRTlas~D~~wrfInVRR~~d~Ie~sI~~a~~~~VfE----PNd~~l~~~V~~sInafL~~L~~~GAL~G------- 694 (742) +|-.-++++ .|.+|.+.+-.+|+++.++..+....-. |-|..-...|+..|+.-|++-+++|.|.- T Consensus 359 ~~~~G~~sG---~~~wiD~~~g~dWl~~~iq~~l~~ll~~~~kIPyt~~G~~~l~a~i~~~l~~av~nG~Ia~Gv~l~~~ 435 (501) T protein:vir:10 359 IAYDGKLSG---KFLWVDTYLDQIYLNAELQRAEFEAMLAYNSLPYNEDGYTANYRAGVDVIDAAVTSGIIRAGVTLTNS 435 (501) T ss_pred EEEcceeec---cceehhhHhhHHHHHHHHHHHHHHHHhcCCCcccCHHHHHHHHHHHHHHHHHHHhCcceecCcccCcc Confidence 885544444 3667999999999999999988765432 66889999999999999999999999853 Q ss_pred ----------------------EEEEEcC-CCCHHHhhC-CEEEEEEEEEecCCceEEEEEEEEee Q lcl|Aclame:pro 695 ----------------------YEVAIDS-VTTPTDIDN-NTLRARVTVQPARSIEYIDITFVITP 736 (742) Q Consensus 695 ----------------------f~V~~De-tNtp~dI~~-GrL~i~I~vaP~~PAEfI~l~f~it~ 736 (742) |.+..+. +.++++..+ ....+.+.++--..+++|++-..--- T Consensus 436 q~~~i~~~~g~~~~~~~v~~~Gyy~~~~~~~~~~~~R~~R~~p~~~~~y~~~gaIh~v~i~s~~v~ 501 (501) T protein:vir:10 436 QLQQIDAVAGVAGAGALVQTRGWYFLIGNPANPGQARQNRTSPACTLWYSDGGSIQELTIGSNAVI 501 (501) T ss_pred cceeecccccccccccceeccceEEeeCcccCChhhhhhcccCceEEEEEeCCceeEEEeeeeecC Confidence 2222221 122222111 22233333333334444432111000 No 67 >protein:vir:94073 Length: 494 # NCBI annotation: hypothetical protein # Family: family:all:396 # MgeID: mge:1493 # MgeName: OP2 # Cross-refs: genbank:acc:YP_453619;genbank:gi:84662655;genbank:GeneID:5142583 Probab=70.80 E-value=0.2 Score=24.37 Aligned_cols=431 Identities=12% Similarity=0.044 Sum_probs=158.7 Q ss_pred ccCCCCCccceeeeeeecCCCCCeeeecccCceEEEEcCceEEec--ccccCCcceEEEEecccccc-ccccc-hh-hhh Q lcl|Aclame:pro 261 IRGVSANTEYIRFRQVNLNPESPNYIERVIGNMTFEFDGERIVTG--GEYPNQVPFLRVVVSQDIKQ-NVAGV-EK-WVP 335 (742) Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vtG--~~~~n~~p~L~~si~~~~~~-~~ag~-s~-~ip 335 (742) ..+.|- .+++++ ++.++|. +...-.+.+.. +++ ..++++ .+.|+-.+++.. +|... +. .+- T Consensus 1 m~~ip~-s~iV~V-~~~v~~~---------~~~~~~f~~~l-~~~~~~~~~~r--~~~y~s~~~V~~~FG~~S~ey~aA~ 66 (494) T protein:vir:94 1 MPNIPI-SQIVSI-NPQVVSA---------GGTQGTLDGLL-LTQATGFPVTQ--PQVYFSAADVGTAFGLTSDEYNAAL 66 (494) T ss_pred CCCCCc-ccEEEe-eeecccc---------CCcccccceeE-eecCccCCccc--eeeecCHHHHHHhcCCChHHHHHHH Confidence 111111 111100 2233333 12223333333 333 222334 366766666664 34422 21 122 Q ss_pred hhhhhheecccceEEEEEEEEEeeeccccc-cccc--hhhheeeeecccccceeeeeec-ccccccccccccceeeeccC Q lcl|Aclame:pro 336 VGFEGIYSVGDFTVIVNELTNVSIPVTDSA-IIPP--MRFTRIEQITLSGGASFSVISN-QPYGFNIQDSRHSYWLSPFK 411 (742) Q Consensus 336 ~al~aI~avg~~tv~v~~itnv~~p~tdsa-~vp~--~~~~li~~~~l~~ga~~~vl~~-~~~~~~i~~s~~~~~Ls~l~ 411 (742) .-+.+|... +..+..+.......+... .+.+ ....+....... .++++..+ ++...++..+... .+. T Consensus 67 ~yFs~~~~q---~p~P~~l~igR~~~~a~~~~l~g~~~~~tl~~~~~~~--g~l~iti~g~~~~~~i~lS~~t----s~~ 137 (494) T protein:vir:94 67 VYFAGILGG---GQQPASLTIGRYASAATSAAVFGAPLTLSLAQLQTLS--GTLIVTTDTQRTSAAINLSGAT----SFA 137 (494) T ss_pred HHhhhccCC---CccccEEEEEeecCccccceeeccchhhhHHhhhhcc--eEEEEEEcceEEEeeecccccC----Chh Confidence 222222111 222222222222211110 0111 000111111111 11221111 1111111111110 011 Q ss_pred Ccceeeeccccccc----cc-ccceeEeecccccccccceeeeccCCcceE-EEecCCccccccccccccccccchhhHH Q lcl|Aclame:pro 412 DDELIIGTELVLPA----LD-VSTEFGVSSWEEALPEFSFLMPFQGGSDGY-IRVDENEPDTIGRVKITPALLANYERLL 485 (742) Q Consensus 412 d~s~~v~td~~a~a----~d-~s~~v~l~~~~~~~p~a~~av~l~gGtdg~-i~vd~~~~~~ig~~~~~~~~~a~rtGL~ 485 (742) +.........-.++ .+ ....+.+.+..... ...+....++... ..+.......+...+. .....-+.+. T Consensus 138 ~vA~~i~~ai~~a~~~v~~d~~~~~f~v~s~ttG~---~s~is~~t~~~a~~l~lt~~~~a~v~~~g~--~aet~~~a~~ 212 (494) T protein:vir:94 138 NAASLMTSGFTTPNFAITYDAQRRRFVLSTTATGT---TASVSAVTGTLADGVGLSTASGAYVEGSGL--AADTAASALD 212 (494) T ss_pred hHHHHHhhhhccccceEEEcccCcEEEEEEccCCc---eeEEEEeccchhhhhhhhccccceEeecCc--ccccHHHHHH Confidence 10000000000000 00 01111111111100 0011111111000 0000000000000000 0011123455 Q ss_pred HhhccC-C-ccEEEEcCCCchHHHHHHHHHHHhhcCceEEEE-ECCCC---CChHHHHHHHHhccCCcEEEEEecceeec Q lcl|Aclame:pro 486 PLLTED-Q-FDLVLTPYLTFADHAGTVNAFINRAENRFLYLF-DIAGD---DDTENLAISLAGYINSSFATTFFPWVRRL 559 (742) Q Consensus 486 AL~~~d-~-v~LL~aPg~t~s~v~aal~Al~a~a~~R~~aI~-D~p~~---~~t~~~A~a~r~~~~S~~aaL~~PwVkv~ 559 (742) ++.... + ..+.++...++++.. ++.+.++..+.++.+.. +.... ....+......+..+..|....|.. T Consensus 213 a~~~~~~~Wy~f~~~~~~~~~~il-alA~wiea~~~~~~~~~~~~d~~~~~~~~~~~i~~~l~~~~y~~t~~~y~~---- 287 (494) T protein:vir:94 213 RLAASSSTWAIFTTAWAASLSDRT-ALAQWTSDQVFRRIYAAWDQDAAGLSVNNVSSFGNIVKTTPFSNTIPVYGL---- 287 (494) T ss_pred HHHhccCceEEEEEecCCCHHHHH-HHHHHHhhcCccEEEEEecCCcceeecccchhHHHHHHhhcCCceEEEcCC---- Confidence 554432 1 234445444444433 44455554444444322 21111 0111111122223344455555542 Q ss_pred cccceeEechHHHHHHHHhhhccCc--e-eecCCc-eeeEeeeccccchhHHhhhcCCceEEEEcC-C--CEEEEcceec Q lcl|Aclame:pro 560 TNKGMRTVPASLAAYRSIRTTDPET--G-LAPVGA-RRGVVTGEPVRQVDWEDLYNNRINPIVRVG-N--DVLLFGQKTM 632 (742) Q Consensus 560 d~~~~~~vPpSgavAGl~ArtD~e~--G-v~~SPa-N~~I~~~~~ls~sE~d~LN~~GINtI~~fg-~--G~rlWGnRTl 632 (742) ..+.+++.|..|..|-+. | ..+.-+ ..+......++..|.+.|..+|+|+...+. . =+.+|...++ T Consensus 288 -------~~~~aa~~g~~aa~~~~~~~g~~T~~~k~q~~gi~~~~l~~t~a~al~~~~~N~y~~~~~~~~~~~~~~gg~~ 360 (494) T protein:vir:94 288 -------LANAMIVLAWGASTNLQIAEGRTTLALRSPVSSAGVRVDNLANANALLSNGYTYLGKYASATNTYTVTYNGAI 360 (494) T ss_pred -------CChHHHHHHHHHhccccccCcceeEEeeccCCCCCCccCCHHHHHHHHhcCCeEEEEecccCceEEEecCcee Confidence 113456666667665432 2 111111 112233344677899999999999998873 2 3677866666 Q ss_pred CCCccccceeehhhhhHHHHHHHHHHHHHhhcc----cCCHHHHHHHHHHHHHHHHHHHhCCceee-------------- Q lcl|Aclame:pro 633 LNVNSALNRINVRRLLIVMRNRISQILSSYLFE----NNTSENRLRAEALVRQYLESLRLRGAVTD-------------- 694 (742) Q Consensus 633 as~D~~wrfInVRR~~d~Ie~sI~~a~~~~VfE----PNd~~l~~~V~~sInafL~~L~~~GAL~G-------------- 694 (742) .+ +|.+|-+-+=.+|+++.++..+....-. |.|..-...|+..|+.-|++-+++|.|.- T Consensus 361 sG---~~~~id~~~~~~WL~~~iq~~l~~ll~~~~KIPytd~G~~~l~a~i~~~l~~av~nG~I~~Gv~~~~~q~~~i~~ 437 (494) T protein:vir:94 361 GG---QFLWADTALGWIALRRNLQQALFETLLAYRSLPYNADGYNALYQGAQDVVSQFVAAGVIRAGVALSASQRAQIDQ 437 (494) T ss_pred cc---ccceeeeeccHHHHHHHHHHHHHHHHHhCCCcccChhhHHHHHHHHHHHHHHHHhCceeecccccCcchhhhhhh Confidence 33 3434443344457777777777654332 77899999999999999999999999952 Q ss_pred --------------EEEEEcCCCCHHH---hhCCEEEEEEEEEecCCceEEEEEEEEee Q lcl|Aclame:pro 695 --------------YEVAIDSVTTPTD---IDNNTLRARVTVQPARSIEYIDITFVITP 736 (742) Q Consensus 695 --------------f~V~~DetNtp~d---I~~GrL~i~I~vaP~~PAEfI~l~f~it~ 736 (742) |.+......++++ ....++.+.+ .-...+++|++..+.-- T Consensus 438 ~~G~~~~~~~~~kGyy~~~~~~~s~~~ra~R~~~~~~~~y--~~~GAIh~v~i~~~~v~ 494 (494) T protein:vir:94 438 AAGVPISGDVVDKGWYLQVIDPITTTVRTDRGSPTVNFWY--CDGGSIQRVVVSATTVI 494 (494) T ss_pred hhcCccccceeccceeeeccCCCChhhhhccccCCceEEE--EecCcEEEEEEeeEEeC Confidence 2232212222222 2222222222 22455555554433322 No 68 >protein:vir:107720 Length: 515 # NCBI annotation: gp17 # Family: family:all:396 # MgeID: mge:1520 # MgeName: BcepB1A # Cross-refs: genbank:acc:YP_024865;genbank:gi:48697507;genbank:GeneID:2948336 Probab=70.24 E-value=0.21 Score=24.28 Aligned_cols=435 Identities=11% Similarity=0.003 Sum_probs=146.5 Q ss_pred CCCCccceeeeeeecCCCCCeeeecccCceEE-EEcCceEEec--ccccCCcceEEEEecccccc-cccc-chhhhhhh- Q lcl|Aclame:pro 264 VSANTEYIRFRQVNLNPESPNYIERVIGNMTF-EFDGERIVTG--GEYPNQVPFLRVVVSQDIKQ-NVAG-VEKWVPVG- 337 (742) Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~vtG--~~~~n~~p~L~~si~~~~~~-~~ag-~s~~ip~a- 337 (742) .| -=+.++|.+||.+ -+ .+.... .+.+ ++++- ..+++++ +.|+-.+++.. +|.. .+...-+. T Consensus 1 m~----I~~~~~V~i~~~v----~a-a~~~~~~~f~~-li~t~~~~~p~~r~--~~y~s~~~V~~~FG~~S~ey~aA~~y 68 (515) T protein:vir:10 1 MP----ISFDKYVAITSGV----AA-QQQIAARSFAI-RVYTPNPMVSVDRL--ITATSAADVGAYFGTASEEYKRAVKN 68 (515) T ss_pred CC----CCceeEEEeeccc----cc-CCcccccccee-eeeecccCCCccce--eeecCHHHHHHhcCCChHHHHHHHHH Confidence 11 1133566676651 00 011111 2223 33322 1222332 55555556665 3442 22212111 Q ss_pred hhhheecccceEEEEEEEEEeeeccccc-cccc---hhhheeeeecccccceeeeeeccc---ccccccccccceeeecc Q lcl|Aclame:pro 338 FEGIYSVGDFTVIVNELTNVSIPVTDSA-IIPP---MRFTRIEQITLSGGASFSVISNQP---YGFNIQDSRHSYWLSPF 410 (742) Q Consensus 338 l~aI~avg~~tv~v~~itnv~~p~tdsa-~vp~---~~~~li~~~~l~~ga~~~vl~~~~---~~~~i~~s~~~~~Ls~l 410 (742) +.+|.. .+-.+..+....-..+... ...+ ....+.....+..|. +++..+.. ...++..+... .+ T Consensus 69 Fsg~~~---q~p~P~~L~igR~~~~a~~~~l~g~~~~~~~l~~~~~is~G~-ltitidG~~~~t~s~i~~S~at----s~ 140 (515) T protein:vir:10 69 FGFISK---KTRRPTSIQFARWQREAGPVAIYGGAKKAAALATLQAVTAGA-ISFLFGGATTVTVSGISFSAAT----SL 140 (515) T ss_pred hhhccC---CcccccEEEEEeccCcccceEEEeccchhhhHHhhhccccee-EEEEEcceEEEEeecccccccc----CH Confidence 211111 1112222222221111110 0000 000111111111111 22221110 01111111110 00 Q ss_pred CCcceeeeccccccc-ccc-cceeEeecccccccccceeeeccCCcceEEEec----CCccccccc-cccc--------c Q lcl|Aclame:pro 411 KDDELIIGTELVLPA-LDV-STEFGVSSWEEALPEFSFLMPFQGGSDGYIRVD----ENEPDTIGR-VKIT--------P 475 (742) Q Consensus 411 ~d~s~~v~td~~a~a-~d~-s~~v~l~~~~~~~p~a~~av~l~gGtdg~i~vd----~~~~~~ig~-~~~~--------~ 475 (742) .+........+-+.. ... ...+... .....+......+| ....+... ......+.. .+.. . T Consensus 141 ~~vAs~i~tal~~~~~~~~~~~tv~~d---~~~~~F~v~s~~tG-~~~~is~~~~t~~~~~t~~a~~lglt~~~~av~~~ 216 (515) T protein:vir:10 141 ADVASELQTALRANADANLATCTVSYD---PVGARFNFAGSPSD-DTVQESISIVPQSNPAIDVAQLLGWNSAQGASYIA 216 (515) T ss_pred HHHHHHHHhhhccccccccceeEEEEe---cCCCeEEEEEeecC-CceeEEEEEecCCCchhhHHHHhccccccceEEec Confidence 000000000000000 000 0000000 00000111111011 11000000 000000000 0000 0 Q ss_pred c--cccchhhHHHhhccC-C-ccEEEEcCCC---chHHHHHHHHHHHhhcCceEEEEECCCCCCh--HHHHHHHHhccCC Q lcl|Aclame:pro 476 A--LLANYERLLPLLTED-Q-FDLVLTPYLT---FADHAGTVNAFINRAENRFLYLFDIAGDDDT--ENLAISLAGYINS 546 (742) Q Consensus 476 ~--~~a~rtGL~AL~~~d-~-v~LL~aPg~t---~s~v~aal~Al~a~a~~R~~aI~D~p~~~~t--~~~A~a~r~~~~S 546 (742) + ....-+.|.++.... + ..+..+.... ..+...++.+.++.-..++ ........... ...+..... .. T Consensus 217 g~aaet~~~a~~a~~~~s~nWy~f~~a~~~~~~~~~a~~~a~a~~~e~~~~~~-~~~~~~~~~~~~~~~a~~~~~~--~~ 293 (515) T protein:vir:10 217 ASPVVSPVDTLIASVAGNNNFGSILFTKNGGTGITLSDAEAIALQNQSYNVAY-KFQVGVDDTTYSSWQAALAAIG--GV 293 (515) T ss_pred ccccccHHHHHHHHHhccCCeEEEEEeecCccccchhHHHHHHHHHhhcCceE-EEEeccCccceechhhhhhhhh--hc Confidence 0 001122333333321 1 1222221111 0111112222222211111 11111111000 011111111 01 Q ss_pred cEEEEEecceeeccccceeEechHHHHHHHHhhhccC--ce-eecCCceeeEeeeccccchhHHhhhcCCceEEEEc--- Q lcl|Aclame:pro 547 SFATTFFPWVRRLTNKGMRTVPASLAAYRSIRTTDPE--TG-LAPVGARRGVVTGEPVRQVDWEDLYNNRINPIVRV--- 620 (742) Q Consensus 547 ~~aaL~~PwVkv~d~~~~~~vPpSgavAGl~ArtD~e--~G-v~~SPaN~~I~~~~~ls~sE~d~LN~~GINtI~~f--- 620 (742) .+...+++.... .+.+..+|..|.+|-+ .| +-+.-+..+-+....++..|.+.|..+|+|+...+ T Consensus 294 ~~~~~~~~~~~~---------~~~a~~~g~~asvnf~~~ng~iT~kfKq~~Gita~~lt~t~a~al~~~~~N~Y~~~~~~ 364 (515) T protein:vir:10 294 NMIYSPVALAAE---------YHDMQDGIIEAATDFTQQGGATGYMYVQFNNQTPAVNDDTLSGILDDLNINYYGQTQVN 364 (515) T ss_pred CceEEEEeccCc---------chHHHHHHHHHhcCCCccchhheeccccCCCCccccCCHHHHHHHHhcCCeEEEEEecc Confidence 111111221100 1234556666766632 22 11112222222334578899999999999999876 Q ss_pred CCCEEEEcceecCCCccccceeehhhhhHHHHHHHHHHHHHhhcc----cCCHHHHHHHHHHH-HHHHHHHHhCCceeeE Q lcl|Aclame:pro 621 GNDVLLFGQKTMLNVNSALNRINVRRLLIVMRNRISQILSSYLFE----NNTSENRLRAEALV-RQYLESLRLRGAVTDY 695 (742) Q Consensus 621 g~G~rlWGnRTlas~D~~wrfInVRR~~d~Ie~sI~~a~~~~VfE----PNd~~l~~~V~~sI-nafL~~L~~~GAL~Gf 695 (742) ++.+.+|-.-++.+-..+|++|.+.|-.+|++..++..+....-. |.|..-...|+..+ +.-|++-+++|.|.-+ T Consensus 365 ~~~~~~~~~G~~~gG~~~~~WiD~~~g~~WL~~~iq~~l~~L~~s~~KIPytd~G~a~i~a~v~q~vl~~av~nG~I~~G 444 (515) T protein:vir:10 365 GTNLSFYQDGVMMGGPTDPRDSNVYANEQWLKSYAGASFMSLQLAQGKIPANIEGRGLLLGKMTKDIIPAAKLNGTFSIG 444 (515) T ss_pred CceEEEEeCCeeeCCccchhHHHHHhhHHHHHHHHHHHHHHHHhcCCCCccChhhHHHHHHHHHHHHHHHHHhCCeeecC Confidence 345888876655555556788999999999999999998774322 66788888888877 4689988999988632 Q ss_pred EEEEcC-------------CCCHHHhhCCE-------------------EEEEEEEEecCCceEEEEEEEEe Q lcl|Aclame:pro 696 EVAIDS-------------VTTPTDIDNNT-------------------LRARVTVQPARSIEYIDITFVIT 735 (742) Q Consensus 696 ~V~~De-------------tNtp~dI~~Gr-------------------L~i~I~vaP~~PAEfI~l~f~it 735 (742) . +++. ..+.+-...|. +.+..-..--..+++|+...+.- T Consensus 445 v-~ls~~Q~~~i~~~~g~d~~~~~~~~~Gyy~~~~~~~~~~~~~r~~~~~~~~~~y~~g~~i~~i~~~~~~v 515 (515) T protein:vir:10 445 K-TLTVDQQLFVTELTGDDTAWQKVQNLGYWYDVQISSFVDTGGTTKYQAVYSLVYSKDDLIRKVVGTHTLI 515 (515) T ss_pred c-ccchhHHHHHHhhhcCcccccchhhcceeEecCcCCCCCcccccccCceeEEEEEcCceEEEEEeeeecC Confidence 1 1110 01111123342 22111112222233333222211 No 69 >protein:vir:78611 Length: 501 # NCBI annotation: BcepNY3gp03 # Family: family:all:396 # MgeID: mge:1854 # MgeName: BcepNY3 # Cross-refs: genbank:acc:YP_001294840;genbank:gi:149882903;genbank:GeneID:5291082 Probab=64.81 E-value=0.29 Score=23.50 Aligned_cols=436 Identities=11% Similarity=0.048 Sum_probs=158.2 Q ss_pred EEEeeccCCCCCccceeeeeeecCCCCCeeeecccCceEEEEcCceEEecc--cccCCcceEEEEecccccc-ccccc-h Q lcl|Aclame:pro 256 VHFRDIRGVSANTEYIRFRQVNLNPESPNYIERVIGNMTFEFDGERIVTGG--EYPNQVPFLRVVVSQDIKQ-NVAGV-E 331 (742) Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vtG~--~~~n~~p~L~~si~~~~~~-~~ag~-s 331 (742) ..|.+| |-+.-=+| ++.++|..+. ...+.| ++++.. .++++. ..|+-.+++.. +|... + T Consensus 1 m~~~~i--p~s~iV~V---~~~v~~~~~~---------~~~~~~-lll~~~~~~~~~r~--~~y~s~~~V~~~FG~~S~e 63 (501) T protein:vir:78 1 MPTTTI--PIDQIVQM---LPGVIGAGGA---------PGRLTG-LVLTQDTSIQPGQL--ADFFQKTDVENWFGGLSNE 63 (501) T ss_pred CCcCcc--ccceEEEE---eeecccCCCc---------ceeeee-EEEecCCCCCccce--eeecCHHHHHHhcCCChHH Confidence 111111 01111112 3334444332 222333 344432 234443 56666566654 34322 2 Q ss_pred h-hhhhhhhhheecccceEEEEEEEEEeeecccc-ccccch--h-hheeeeecccccceeeeeec-ccccccccccccce Q lcl|Aclame:pro 332 K-WVPVGFEGIYSVGDFTVIVNELTNVSIPVTDS-AIIPPM--R-FTRIEQITLSGGASFSVISN-QPYGFNIQDSRHSY 405 (742) Q Consensus 332 ~-~ip~al~aI~avg~~tv~v~~itnv~~p~tds-a~vp~~--~-~~li~~~~l~~ga~~~vl~~-~~~~~~i~~s~~~~ 405 (742) . .+-.-+.++... +-.+..+.......+.. ..+.+. . ..+......++ ++.+..+ .....++..+.... T Consensus 64 y~aA~~yFs~~~~q---~~~P~~l~igR~~~~a~~~~l~g~~l~~~~la~~~~~~G--~l~iti~g~~~~~~i~~S~~ts 138 (501) T protein:vir:78 64 AVIADAYFPGIVNG---GQLPYDLKFARYVAADAPASVYGIPLTGVTLTQLQGYSG--TLTVTTAAQHVSSNISLAAATS 138 (501) T ss_pred HHHHHHHhhcCCCC---CcccceEEEEeecccCcceeEeccceeccchhhhceeee--EEEEEeccceeeeccccccccC Confidence 1 121112211111 11222222222111111 111110 0 00111111111 1111111 11111111111110 Q ss_pred eeeccCCcceeeeccccccc----cc-ccceeEeecccccccccceeeeccCCcceE--EEecCCccccccccccccccc Q lcl|Aclame:pro 406 WLSPFKDDELIIGTELVLPA----LD-VSTEFGVSSWEEALPEFSFLMPFQGGSDGY--IRVDENEPDTIGRVKITPALL 478 (742) Q Consensus 406 ~Ls~l~d~s~~v~td~~a~a----~d-~s~~v~l~~~~~~~p~a~~av~l~gGtdg~--i~vd~~~~~~ig~~~~~~~~~ 478 (742) +.+....+...+-++. .+ ....+.+.....+... +.. ...++++.. ..+....+..+...+ .... T Consensus 139 ----~~~vA~~i~~al~a~~~tv~~ds~~~~f~its~t~G~~~-~i~-~~t~~~~~a~~l~Lt~~~~a~v~~~g--~~ae 210 (501) T protein:vir:78 139 ----FANAATLIEAAFTSPDFVVSYDALRNRFVVNTNATGTAA-AIS-AVTGTNNLADELGLSAAAGASLQAAG--VAAD 210 (501) T ss_pred ----HHHHHHHHHhhhcCcceEEEEccccceEEEEeeecCCce-eEE-EEecccchhhhhcccccCceeeEecc--cccc Confidence 0000000000000000 00 0011111111111000 000 000111000 001100000000000 0001 Q ss_pred cchhhHHHhhccC-Cc-cEEEEcCCCchHHHHHHHHHHHhhcCceEEEE-ECCCC---CChHHHHHHHHhccCCcEEEEE Q lcl|Aclame:pro 479 ANYERLLPLLTED-QF-DLVLTPYLTFADHAGTVNAFINRAENRFLYLF-DIAGD---DDTENLAISLAGYINSSFATTF 552 (742) Q Consensus 479 a~rtGL~AL~~~d-~v-~LL~aPg~t~s~v~aal~Al~a~a~~R~~aI~-D~p~~---~~t~~~A~a~r~~~~S~~aaL~ 552 (742) .--+.+.++.... +. .+..+...++++.. ++.+.++..+.|+.+.. +.... ....+.........+..+...+ T Consensus 211 t~~~a~~a~~~~~~~Wy~f~~a~~~~~~~~l-alA~wiea~~~~f~~~~~~~~~~~~~~~~~~~i~~~l~a~~y~~t~~~ 289 (501) T protein:vir:78 211 TPASAMNRAVGLSRNWATFTTAWTAVIADRL-ALASWNSGQAYKYMYVAPDLEPASIVTNNSASFGAQVFAAPYQGTLPL 289 (501) T ss_pred CHHHHHHHHHhccCceEEEEEecCCCHHHHH-HHHHHHHhcCceEEEEEecCCcceeecccchhHHHHHhhcCCCceEEE Confidence 1123455544332 11 23344444333333 34445554344443322 21111 0011111111112233344444 Q ss_pred ecceeeccccceeEechHHHHHHHHhhhccC--ce-eecCCce-eeEeeeccccchhHHhhhcCCceEEEEc-C--CCEE Q lcl|Aclame:pro 553 FPWVRRLTNKGMRTVPASLAAYRSIRTTDPE--TG-LAPVGAR-RGVVTGEPVRQVDWEDLYNNRINPIVRV-G--NDVL 625 (742) Q Consensus 553 ~PwVkv~d~~~~~~vPpSgavAGl~ArtD~e--~G-v~~SPaN-~~I~~~~~ls~sE~d~LN~~GINtI~~f-g--~G~r 625 (742) |+. ..+.+++.|..|.+|-+ .| +.+.-+. .+......++..|.+.|..+|+|++..+ + +.+. T Consensus 290 y~~-----------~~~~aa~~g~~as~nf~~~~g~~T~~fkq~~~Gv~a~~l~~t~a~al~~~~~N~y~~~~~~~~~~~ 358 (501) T protein:vir:78 290 YGD-----------QATAGAVMGYAASINFQLRNGRTVLAFRQFNAGVPATAHDLGTANALRSNNYTYIGAYANAANNYT 358 (501) T ss_pred cCC-----------cchHHHHHHHHHhcCcccCcceeeeeccccCCCcCcccCCHHHHHHHHhcCCeEEEEEecccceee Confidence 431 02345667777777643 22 1121211 1222334578899999999999999876 2 3478 Q ss_pred EEcceecCCCccccceeehhhhhHHHHHHHHHHHHHhhcc----cCCHHHHHHHHHHHHHHHHHHHhCCceee------- Q lcl|Aclame:pro 626 LFGQKTMLNVNSALNRINVRRLLIVMRNRISQILSSYLFE----NNTSENRLRAEALVRQYLESLRLRGAVTD------- 694 (742) Q Consensus 626 lWGnRTlas~D~~wrfInVRR~~d~Ie~sI~~a~~~~VfE----PNd~~l~~~V~~sInafL~~L~~~GAL~G------- 694 (742) +|-.-++++ .|.+|.+-+-.+|+++.++..+....-. |.|..-...|+..|+.-|++-+++|.|.- T Consensus 359 ~~~~G~~sG---~~~wiD~~~~~~Wl~~~iq~~l~~ll~~~~kIPyt~~G~~~l~a~v~~~l~~av~nG~I~~Gv~l~~~ 435 (501) T protein:vir:78 359 IAYDGKLSG---KFLWVDTYLDQIYLNAELQRAEFEAMLAYNSLPYNEDGYTALYRAGVDVIDAAVTSGIIRAGVTLTNS 435 (501) T ss_pred EEEcCeeec---cceeehhhhhHHHHHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHHHHHHHHHhCceeecCCCCCCc Confidence 885545544 3666888888888888888888764432 77899999999999999999999999852 Q ss_pred ----------------------EEEEEcC-CCCHHHhh-CCEEEEEEEEEecCCceEEEEEEEEee Q lcl|Aclame:pro 695 ----------------------YEVAIDS-VTTPTDID-NNTLRARVTVQPARSIEYIDITFVITP 736 (742) Q Consensus 695 ----------------------f~V~~De-tNtp~dI~-~GrL~i~I~vaP~~PAEfI~l~f~it~ 736 (742) |.+..+. +.++++.. +....+.+.++--..+++|++-..--- T Consensus 436 q~~~I~~~~g~~~~~~~~~~~Gyy~~~~~~~~~~~~R~~R~~p~~~~~y~~~gaIh~v~i~s~~v~ 501 (501) T protein:vir:78 436 QLQQIDAAAGVAGAGQLVQMRGWYFLIGDPANPGQARQNRTTPTCTLWYSDGGSIQELTIGSNAVI 501 (501) T ss_pred cceeeccccCccccccceeccceEEeeccccCChhhhhhcccCcEEEEEEeCCceeEEEeeeeecC Confidence 2222221 11222211 111223333333333333332111000 Done!