Query lcl|Aclame:protein:vir:8666|NCBI_annot:gp24|genbank:acc:NP_817785;genbank:gi:29566217;genbank:GeneID:1259475 Match_columns 205 No_of_seqs 20 out of 24 Neff 3.3 Searched_HMMs 1612 Date Sat Nov 30 13:35:45 2013 Command /home/guerois/workspace/virfam/python/lib/hhsearch//hhsearch2 -i .//seq/seq_24 -d /home/guerois/workspace/virfam/python/profile_database/capsid_neck_tail.hhm -glob -cpu 7 -o .//seq/HHR/seq_24_vs_rec_db.hhr No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM 1 protein:vir:99098 Length: 205 100.0 7E-122 5E-125 684.7 18.3 205 1-205 1-205 (205) 2 protein:vir:8666 Length: 205 # 100.0 7E-122 5E-125 684.7 18.3 205 1-205 1-205 (205) 3 protein:vir:106038 Length: 246 100.0 3E-115 2E-118 648.4 16.5 204 1-205 39-246 (246) 4 protein:vir:102438 Length: 252 100.0 2E-114 1E-117 644.4 16.5 205 1-205 46-252 (252) 5 protein:vir:97979 Length: 245 100.0 2E-108 1E-111 611.2 15.3 201 1-205 42-245 (245) 6 protein:vir:107532 Length: 245 100.0 2E-108 1E-111 611.2 15.3 201 1-205 42-245 (245) 7 protein:vir:106490 Length: 271 100.0 4E-105 3E-108 592.6 15.5 199 1-205 37-253 (271) 8 protein:vir:8104 Length: 170 # 97.8 8.2E-07 5.1E-10 54.0 11.4 151 27-202 1-170 (170) 9 protein:vir:101652 Length: 188 97.0 5.3E-06 3.3E-09 49.5 6.8 159 9-202 1-188 (188) 10 protein:vir:7857 Length: 188 # 97.0 5.3E-06 3.3E-09 49.5 6.8 159 9-202 1-188 (188) 11 protein:vir:1435 Length: 188 # 96.9 1.9E-05 1.2E-08 46.5 9.2 139 1-204 34-188 (188) 12 protein:vir:81255 Length: 180 96.5 6.3E-05 3.9E-08 43.6 9.5 158 18-201 1-180 (180) 13 protein:vir:80320 Length: 188 96.1 0.00017 1E-07 41.3 9.5 136 1-204 34-188 (188) 14 protein:vir:8430 Length: 189 # 86.8 0.024 1.5E-05 29.4 8.2 166 9-202 1-189 (189) 15 protein:vir:3160 Length: 198 # 85.8 0.032 2E-05 28.8 8.3 167 16-194 1-198 (198) 16 protein:vir:8326 Length: 201 # 81.2 0.047 2.9E-05 27.9 7.3 158 22-190 1-201 (201) No 1 >protein:vir:99098 Length: 205 # NCBI annotation: gp22 # Family: family:all:2801 # MgeID: mge:1608 # MgeName: Qyrzula # Cross-refs: genbank:acc:YP_655702;genbank:gi:109521780;genbank:GeneID:4157820 Probab=100.00 E-value=7.3e-122 Score=684.69 Aligned_cols=205 Identities=100% Similarity=1.685 Sum_probs=204.3 Q ss_pred CeeecccCccccccceEEeecCCCCCCCCCCcccCcceeeeCcceeeeCCCCCCCccCCCCceEecCCCcCCeeEEEeCC Q lcl|Aclame:pro 1 MVLWAFTGRQFGLCETTVRPCPGGGGPRDMRPWSQPLLWWDGTHWLNASCGCAGRCQVSGPGVVHLPSPAAEVLAVTLGD 80 (205) Q Consensus 1 ~vLWalSGRqfG~c~~tvRPCp~~~~~~~~~~~~~~~~~~~gg~W~n~~CGC~g~C~~~gp~~VhLpGPv~~v~eV~i~G 80 (205) ||||++||||||+|++||||||.+++++++++|.|.|++|+|++|+|++|||.++|+++||++|||||||+||+||+||| T Consensus 1 ~vLW~~sGRqfG~c~~tvRPcP~~~g~~~~~~~~s~~~~~~G~~W~n~~cgc~~~C~~~gp~~V~LpgPv~~V~eV~i~g 80 (205) T protein:vir:99 1 MVLWAFTGRQFGLCETTVRPCPGGGGPRDMRPWSQPLLWWDGTHWLNASCGCAGRCQVSGPGVVHLPSPAAEVLAVTLGD 80 (205) T ss_pred CeeecccCceeecceeeeecCCCCCCCCCCCccccccccccCcceeeeCCCCccccccCCCceeecCcchheeeeeeECC Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred eeecccceeecCceEEEcCCCcCchhhcCCCCCCCCceEEEeccccccChhHHHHHHHHHHHHHHhCCCCCccCChhhhh Q lcl|Aclame:pro 81 TVLDESEYVLEGNALYRRGGKAWPSQDLGRPLGERGTWSVQYLRGLPVPAGGDKMAGLLAKEFVSACDGGACRLPRTVVQ 160 (205) Q Consensus 81 ~vl~p~~Y~le~~~L~R~~g~~WP~Q~l~~P~gepGTw~VtY~~G~pvP~g~~~~~~~La~e~~~ac~g~~CrLP~~vt~ 160 (205) ++||||+|++|+|+|||+|++|||||||++|+||||||+|||+||+|||+|+++|+|+|||||++||++++||||+|||+ T Consensus 81 ~vv~pa~y~~e~n~L~R~~~~~WP~QdL~~p~~EpgT~aVtY~~G~pvP~g~~~~~~~La~e~~~ac~~g~C~LP~~vT~ 160 (205) T protein:vir:99 81 TVLDESEYVLEGNALYRRGGKAWPSQDLGRPLGERGTWSVQYLRGLPVPAGGDKMAGLLAKEFVSACDGGACRLPRTVVQ 160 (205) T ss_pred EEeCccceeeCCceEEEeCCCcCchhhcCCCCCCCcceEEEeccccccChhHHHHHHHHHHHHHHhcCCCCccCchhhee Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred heecCceEEecCcccccCCCccchHHHHHHhhcCchhhcCCcccC Q lcl|Aclame:pro 161 TTRQGVTHVFDATKLLDLGYTGLTEVDTWLAAINPHHLQQAPVVL 205 (205) Q Consensus 161 ~sRqGVt~~~dpt~i~a~G~TGlpevD~WLaaVNP~~L~~~p~V~ 205 (205) +|||||||++|||+|||+|||||||||+||+|||||+|+|||+|| T Consensus 161 ~sRqGVT~~~~~~~i~a~g~TGlpevDlwLatVNP~~L~~~p~V~ 205 (205) T protein:vir:99 161 TTRQGVTHVFDATKLLDLGYTGLTEVDTWLAAINPHHLQQAPVVL 205 (205) T ss_pred eeecceeEEecCcccccCCcccCchhhhhhhhcCchhhccCcccC Confidence 999999999999999999999999999999999999999999999 No 2 >protein:vir:8666 Length: 205 # NCBI annotation: gp24 # Family: family:all:2801 # MgeID: mge:156 # MgeName: Rosebush # Cross-refs: genbank:acc:NP_817785;genbank:gi:29566217;genbank:GeneID:1259475 Probab=100.00 E-value=7.3e-122 Score=684.69 Aligned_cols=205 Identities=100% Similarity=1.685 Sum_probs=204.3 Q ss_pred CeeecccCccccccceEEeecCCCCCCCCCCcccCcceeeeCcceeeeCCCCCCCccCCCCceEecCCCcCCeeEEEeCC Q lcl|Aclame:pro 1 MVLWAFTGRQFGLCETTVRPCPGGGGPRDMRPWSQPLLWWDGTHWLNASCGCAGRCQVSGPGVVHLPSPAAEVLAVTLGD 80 (205) Q Consensus 1 ~vLWalSGRqfG~c~~tvRPCp~~~~~~~~~~~~~~~~~~~gg~W~n~~CGC~g~C~~~gp~~VhLpGPv~~v~eV~i~G 80 (205) ||||++||||||+|++||||||.+++++++++|.|.|++|+|++|+|++|||.++|+++||++|||||||+||+||+||| T Consensus 1 ~vLW~~sGRqfG~c~~tvRPcP~~~g~~~~~~~~s~~~~~~G~~W~n~~cgc~~~C~~~gp~~V~LpgPv~~V~eV~i~g 80 (205) T protein:vir:86 1 MVLWAFTGRQFGLCETTVRPCPGGGGPRDMRPWSQPLLWWDGTHWLNASCGCAGRCQVSGPGVVHLPSPAAEVLAVTLGD 80 (205) T ss_pred CeeecccCceeecceeeeecCCCCCCCCCCCccccccccccCcceeeeCCCCccccccCCCceeecCcchheeeeeeECC Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred eeecccceeecCceEEEcCCCcCchhhcCCCCCCCCceEEEeccccccChhHHHHHHHHHHHHHHhCCCCCccCChhhhh Q lcl|Aclame:pro 81 TVLDESEYVLEGNALYRRGGKAWPSQDLGRPLGERGTWSVQYLRGLPVPAGGDKMAGLLAKEFVSACDGGACRLPRTVVQ 160 (205) Q Consensus 81 ~vl~p~~Y~le~~~L~R~~g~~WP~Q~l~~P~gepGTw~VtY~~G~pvP~g~~~~~~~La~e~~~ac~g~~CrLP~~vt~ 160 (205) ++||||+|++|+|+|||+|++|||||||++|+||||||+|||+||+|||+|+++|+|+|||||++||++++||||+|||+ T Consensus 81 ~vv~pa~y~~e~n~L~R~~~~~WP~QdL~~p~~EpgT~aVtY~~G~pvP~g~~~~~~~La~e~~~ac~~g~C~LP~~vT~ 160 (205) T protein:vir:86 81 TVLDESEYVLEGNALYRRGGKAWPSQDLGRPLGERGTWSVQYLRGLPVPAGGDKMAGLLAKEFVSACDGGACRLPRTVVQ 160 (205) T ss_pred EEeCccceeeCCceEEEeCCCcCchhhcCCCCCCCcceEEEeccccccChhHHHHHHHHHHHHHHhcCCCCccCchhhee Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred heecCceEEecCcccccCCCccchHHHHHHhhcCchhhcCCcccC Q lcl|Aclame:pro 161 TTRQGVTHVFDATKLLDLGYTGLTEVDTWLAAINPHHLQQAPVVL 205 (205) Q Consensus 161 ~sRqGVt~~~dpt~i~a~G~TGlpevD~WLaaVNP~~L~~~p~V~ 205 (205) +|||||||++|||+|||+|||||||||+||+|||||+|+|||+|| T Consensus 161 ~sRqGVT~~~~~~~i~a~g~TGlpevDlwLatVNP~~L~~~p~V~ 205 (205) T protein:vir:86 161 TTRQGVTHVFDATKLLDLGYTGLTEVDTWLAAINPHHLQQAPVVL 205 (205) T ss_pred eeecceeEEecCcccccCCcccCchhhhhhhhcCchhhccCcccC Confidence 999999999999999999999999999999999999999999999 No 3 >protein:vir:106038 Length: 246 # NCBI annotation: gp20 # Family: family:all:2801 # MgeID: mge:1505 # MgeName: Cooper # Cross-refs: genbank:acc:YP_654917;genbank:gi:109392373;genbank:GeneID:4157066 Probab=100.00 E-value=3e-115 Score=648.45 Aligned_cols=204 Identities=52% Similarity=0.946 Sum_probs=196.4 Q ss_pred CeeecccCccccccceEEeecCCCCC--CCCCCcccCcceeeeCcceeeeCCCCCCCccCCCCceEecCCCcCCeeEEEe Q lcl|Aclame:pro 1 MVLWAFTGRQFGLCETTVRPCPGGGG--PRDMRPWSQPLLWWDGTHWLNASCGCAGRCQVSGPGVVHLPSPAAEVLAVTL 78 (205) Q Consensus 1 ~vLWalSGRqfG~c~~tvRPCp~~~~--~~~~~~~~~~~~~~~gg~W~n~~CGC~g~C~~~gp~~VhLpGPv~~v~eV~i 78 (205) -|||++||||||+|++||||||.+.. .+..+.+.+|+++|+||+|+|++|||.++|+++||++||||||||+|+||+| T Consensus 39 ~vLWa~sGRqfG~c~~tvRPc~~~~~~~~r~~g~~~~~~~sw~Gg~W~n~~Cgc~~~C~~~gp~~VhLpgPv~~V~eV~i 118 (246) T protein:vir:10 39 GVMWALAGRQFGLLDVTSRPCPEYASVLYRDHGQVTSYVVSWEGYGWINLGCGCSGGCRYGGPRAVHLPGPVHAVTEVKL 118 (246) T ss_pred HHHHHhhCCccccchheeccCCCCCCcCCcccccccccccccccCceeeeCCCCccccccCCCceeecCcchheeeeeeE Confidence 89999999999999999999987543 3666777889999999999999999999999999999999999999999999 Q ss_pred CCeeecccceeecCceEEEcCCCcCchhhcCCCCCCCCceEEEeccccccChhHHHHHHHHHHHHHHhCCC-CCccCChh Q lcl|Aclame:pro 79 GDTVLDESEYVLEGNALYRRGGKAWPSQDLGRPLGERGTWSVQYLRGLPVPAGGDKMAGLLAKEFVSACDG-GACRLPRT 157 (205) Q Consensus 79 ~G~vl~p~~Y~le~~~L~R~~g~~WP~Q~l~~P~gepGTw~VtY~~G~pvP~g~~~~~~~La~e~~~ac~g-~~CrLP~~ 157 (205) ||++||||+|+||+|+|||+ +++||||||++|+||||||+|||+||+|||+|+++++++|||||++||++ ++||||+| T Consensus 119 ~G~vl~Pa~Y~~e~n~L~R~-g~~WP~QdL~~p~gEpgTw~VtY~rG~pvP~~~~~~t~~LA~e~~~a~~~~g~C~LPr~ 197 (246) T protein:vir:10 119 AGAVLAPAGYQLENNVLYRV-GARWPHQDLGRPLGEARTWSVTYQRGIPVPESYAALTGLLAKEFLDALDNEGRCRLPRT 197 (246) T ss_pred CCEeeCCcceeecCceEEEe-CCCCChhhcCCCCCCCcceEEEeccCCCCChhHHHHHHHHHHHHHHhcCCCccccCcch Confidence 99999999999999999999 56799999999999999999999999999999999999999999999987 89999999 Q ss_pred hhhheecCceEE-ecCcccccCCCccchHHHHHHhhcCchhhcCCcccC Q lcl|Aclame:pro 158 VVQTTRQGVTHV-FDATKLLDLGYTGLTEVDTWLAAINPHHLQQAPVVL 205 (205) Q Consensus 158 vt~~sRqGVt~~-~dpt~i~a~G~TGlpevD~WLaaVNP~~L~~~p~V~ 205 (205) ||++|||||||+ ||||+|||+|||||||||+||+|||||+|+|||+|| T Consensus 198 vT~~sRqGVtye~~dp~~i~a~g~TGlPevDlwLatVNP~~L~~ap~V~ 246 (246) T protein:vir:10 198 VTTASRQGVTYRAYDPQAIYANGKTGLPEIDLVLAAVNPHALMAAPTVL 246 (246) T ss_pred hheeeeccceEEEecCcccccCCCccCchhhhhhhhcCchhhccCcccC Confidence 999999999995 999999999999999999999999999999999999 No 4 >protein:vir:102438 Length: 252 # NCBI annotation: gp23 # Family: family:all:2801 # MgeID: mge:1618 # MgeName: Pipefish # Cross-refs: genbank:acc:YP_655300;genbank:gi:109521863;genbank:GeneID:4157753 Probab=100.00 E-value=1.7e-114 Score=644.37 Aligned_cols=205 Identities=45% Similarity=0.872 Sum_probs=196.4 Q ss_pred CeeecccCccccccceEEeecCCCCCCCCCCcc-cCcceeeeCcceeeeCCCCCCCccCCCCceEecCCCcCCeeEEEeC Q lcl|Aclame:pro 1 MVLWAFTGRQFGLCETTVRPCPGGGGPRDMRPW-SQPLLWWDGTHWLNASCGCAGRCQVSGPGVVHLPSPAAEVLAVTLG 79 (205) Q Consensus 1 ~vLWalSGRqfG~c~~tvRPCp~~~~~~~~~~~-~~~~~~~~gg~W~n~~CGC~g~C~~~gp~~VhLpGPv~~v~eV~i~ 79 (205) -|||++||||||+|++|||||+.+..++..-+| +++.+.+.||+|+|++|||.++|+++||++|||||||++|+||+|| T Consensus 46 ~vLW~~sGRqfG~c~~tvRPc~~~~~~r~~~g~~t~~~~~~~gg~W~n~~CGc~~~C~~~~~~~vhLpGPv~~V~eV~i~ 125 (252) T protein:vir:10 46 DVLWALSGRQFGICPRSVRPCPNGVRNRTVVGLMTGYVLSRFDGRWSQWPCGCGSTCLRSGPKIIHLPGPARSIETVKIG 125 (252) T ss_pred HHHHHhhCCceeccceeeccCCCCCCCccccCcccccccccCCCceeecCCCCCCCCCccCceeEecCcchheeeeeeEC Confidence 799999999999999999999987776665555 3455566788999999999999999999999999999999999999 Q ss_pred CeeecccceeecCceEEEcCCCcCchhhcCCCCCCCCceEEEeccccccChhHHHHHHHHHHHHHHhCCCCCccCChhhh Q lcl|Aclame:pro 80 DTVLDESEYVLEGNALYRRGGKAWPSQDLGRPLGERGTWSVQYLRGLPVPAGGDKMAGLLAKEFVSACDGGACRLPRTVV 159 (205) Q Consensus 80 G~vl~p~~Y~le~~~L~R~~g~~WP~Q~l~~P~gepGTw~VtY~~G~pvP~g~~~~~~~La~e~~~ac~g~~CrLP~~vt 159 (205) |++||||+|++|+|+|||+|++|||.|||++|+||||||+|||+||+|||+|+++|+|+|||||++||++++||||+||| T Consensus 126 g~vl~ps~Y~~egn~L~R~~g~~WP~QdL~~p~~EpgT~aVtY~rG~PvP~g~~~~~~~La~e~~~ac~~g~C~LP~~vT 205 (252) T protein:vir:10 126 GEVLDPAAYTLEGDYLYRTDGGVWPEQDLSVPASAPGGWEVVYRQGNPVPPGVGKFVGQLAAEFFAACNDGKCKLPRNVT 205 (252) T ss_pred CEEeCccceeecCceEEEeCCCCCcHhHcCCCCCCCcceEEEeccccccCHhHHHHHHHHHHHHHHhcCCCCccCchhhh Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred hheecCceEE-ecCcccccCCCccchHHHHHHhhcCchhhcCCcccC Q lcl|Aclame:pro 160 QTTRQGVTHV-FDATKLLDLGYTGLTEVDTWLAAINPHHLQQAPVVL 205 (205) Q Consensus 160 ~~sRqGVt~~-~dpt~i~a~G~TGlpevD~WLaaVNP~~L~~~p~V~ 205 (205) ++|||||||+ +||++|||+|||||||||+||++||||+|+|||+|- T Consensus 206 ~~sRqGVt~ev~dP~~i~a~g~TGlpevDlwLatVNP~~L~~~p~V~ 252 (252) T protein:vir:10 206 TVTRNGVSYQVVNPTDVYATRKTGLPEVDLWLAAVNPSRIPMAPTVR 252 (252) T ss_pred eeeeccceEEEecCchhhcCCCccCchhhhhhhhcCchhhcCCccCC Confidence 9999999995 999999999999999999999999999999999999 No 5 >protein:vir:97979 Length: 245 # NCBI annotation: gp22 # Family: family:all:2801 # MgeID: mge:1482 # MgeName: Orion # Cross-refs: genbank:acc:YP_655118;genbank:gi:109391868;genbank:GeneID:4157342 Probab=100.00 E-value=1.9e-108 Score=611.21 Aligned_cols=201 Identities=48% Similarity=0.960 Sum_probs=191.5 Q ss_pred CeeecccCccccccceEEeecCCCCCCCCCCcccCcceeeeCcceeeeCCCCCC-CccCCCCceEecCCCcCCeeEEEeC Q lcl|Aclame:pro 1 MVLWAFTGRQFGLCETTVRPCPGGGGPRDMRPWSQPLLWWDGTHWLNASCGCAG-RCQVSGPGVVHLPSPAAEVLAVTLG 79 (205) Q Consensus 1 ~vLWalSGRqfG~c~~tvRPCp~~~~~~~~~~~~~~~~~~~gg~W~n~~CGC~g-~C~~~gp~~VhLpGPv~~v~eV~i~ 79 (205) -|||++||||||+|+++|||||....+.. ..|.++.++|+++.|. +|||.+ .|+++||++|||||||++|+||+|| T Consensus 42 ~vLW~~sGRqfG~c~~~vRPCp~~~~~~~-~~~~s~~g~W~g~~W~--~cgC~g~~C~~~gp~vvhLpgPv~~V~eV~i~ 118 (245) T protein:vir:97 42 AIMWALSGRQFGTYETIARPCPTRPRGNP-FAYRSDDLVWTGEGWL--TCGCVGTGCRIVGPNVVHLPGPVHEVTRVEIG 118 (245) T ss_pred HHHHHhcCceeeccccccccCCcCCCCcc-ccccccceeecCCcee--eccccCCccccccceeeecccccceeeeeeEC Confidence 89999999999999999999995444444 4789999999999995 699986 6999999999999999999999999 Q ss_pred CeeecccceeecCceEEEcCCCcCchhhcCCCCCCCCceEEEeccccccChhHHHHHHHHHHHHHHhCCC-CCccCChhh Q lcl|Aclame:pro 80 DTVLDESEYVLEGNALYRRGGKAWPSQDLGRPLGERGTWSVQYLRGLPVPAGGDKMAGLLAKEFVSACDG-GACRLPRTV 158 (205) Q Consensus 80 G~vl~p~~Y~le~~~L~R~~g~~WP~Q~l~~P~gepGTw~VtY~~G~pvP~g~~~~~~~La~e~~~ac~g-~~CrLP~~v 158 (205) |++||||+|++|+|+|||+++ +||||||++|+||||||+|||+||+|||+|+++|+++|||||++||++ ++||||+|| T Consensus 119 g~vl~ps~Yv~e~n~L~Rr~~-~WP~QdL~~p~~EpgT~aVtY~rG~pvP~g~~~~~~~La~e~~~a~~~~g~C~LP~~v 197 (245) T protein:vir:97 119 GVDLSPAVWVAEGNKLYRREA-PWPAQDLNRPLGDVNTWGVHYTRGVPVPPGISELTGILVKEILGALEDVGRCRLPRTV 197 (245) T ss_pred CEEeCchheeecCceEEEeCC-CCchhhcCCCCCCCcceEEEeccccccChhHHHHHHHHHHHHHHHhCCCCCccCcchh Confidence 999999999999999999988 599999999999999999999999999999999999999999999976 899999999 Q ss_pred hhheecCceEE-ecCcccccCCCccchHHHHHHhhcCchhhcCCcccC Q lcl|Aclame:pro 159 VQTTRQGVTHV-FDATKLLDLGYTGLTEVDTWLAAINPHHLQQAPVVL 205 (205) Q Consensus 159 t~~sRqGVt~~-~dpt~i~a~G~TGlpevD~WLaaVNP~~L~~~p~V~ 205 (205) |++|||||||+ +|||+||++|||||||||+||++||||+|+|||+|| T Consensus 198 T~~sRqGVt~ev~dP~~i~a~g~TGlpevDlwLatVNP~~L~~~p~V~ 245 (245) T protein:vir:97 198 TTASRNGVTYRAYDPAVIYRNGKTGLPEIDLWLATVNPNALMAAPTVI 245 (245) T ss_pred heeeeccceEEEecCchhhcCCCccCchhhhhhhhcCchhhccCcccC Confidence 99999999995 999999999999999999999999999999999999 No 6 >protein:vir:107532 Length: 245 # NCBI annotation: gp22 # Family: family:all:2801 # MgeID: mge:1481 # MgeName: PG1 # Cross-refs: genbank:acc:NP_943800;genbank:gi:38638425;genbank:GeneID:2657212 Probab=100.00 E-value=1.9e-108 Score=611.21 Aligned_cols=201 Identities=48% Similarity=0.960 Sum_probs=191.5 Q ss_pred CeeecccCccccccceEEeecCCCCCCCCCCcccCcceeeeCcceeeeCCCCCC-CccCCCCceEecCCCcCCeeEEEeC Q lcl|Aclame:pro 1 MVLWAFTGRQFGLCETTVRPCPGGGGPRDMRPWSQPLLWWDGTHWLNASCGCAG-RCQVSGPGVVHLPSPAAEVLAVTLG 79 (205) Q Consensus 1 ~vLWalSGRqfG~c~~tvRPCp~~~~~~~~~~~~~~~~~~~gg~W~n~~CGC~g-~C~~~gp~~VhLpGPv~~v~eV~i~ 79 (205) -|||++||||||+|+++|||||....+.. ..|.++.++|+++.|. +|||.+ .|+++||++|||||||++|+||+|| T Consensus 42 ~vLW~~sGRqfG~c~~~vRPCp~~~~~~~-~~~~s~~g~W~g~~W~--~cgC~g~~C~~~gp~vvhLpgPv~~V~eV~i~ 118 (245) T protein:vir:10 42 AIMWALSGRQFGTYETIARPCPTRPRGNP-FAYRSDDLVWTGEGWL--TCGCVGTGCRIVGPNVVHLPGPVHEVTRVEIG 118 (245) T ss_pred HHHHHhcCceeeccccccccCCcCCCCcc-ccccccceeecCCcee--eccccCCccccccceeeecccccceeeeeeEC Confidence 89999999999999999999995444444 4789999999999995 699986 6999999999999999999999999 Q ss_pred CeeecccceeecCceEEEcCCCcCchhhcCCCCCCCCceEEEeccccccChhHHHHHHHHHHHHHHhCCC-CCccCChhh Q lcl|Aclame:pro 80 DTVLDESEYVLEGNALYRRGGKAWPSQDLGRPLGERGTWSVQYLRGLPVPAGGDKMAGLLAKEFVSACDG-GACRLPRTV 158 (205) Q Consensus 80 G~vl~p~~Y~le~~~L~R~~g~~WP~Q~l~~P~gepGTw~VtY~~G~pvP~g~~~~~~~La~e~~~ac~g-~~CrLP~~v 158 (205) |++||||+|++|+|+|||+++ +||||||++|+||||||+|||+||+|||+|+++|+++|||||++||++ ++||||+|| T Consensus 119 g~vl~ps~Yv~e~n~L~Rr~~-~WP~QdL~~p~~EpgT~aVtY~rG~pvP~g~~~~~~~La~e~~~a~~~~g~C~LP~~v 197 (245) T protein:vir:10 119 GVDLSPAVWVAEGNKLYRREA-PWPAQDLNRPLGDVNTWGVHYTRGVPVPPGISELTGILVKEILGALEDVGRCRLPRTV 197 (245) T ss_pred CEEeCchheeecCceEEEeCC-CCchhhcCCCCCCCcceEEEeccccccChhHHHHHHHHHHHHHHHhCCCCCccCcchh Confidence 999999999999999999988 599999999999999999999999999999999999999999999976 899999999 Q ss_pred hhheecCceEE-ecCcccccCCCccchHHHHHHhhcCchhhcCCcccC Q lcl|Aclame:pro 159 VQTTRQGVTHV-FDATKLLDLGYTGLTEVDTWLAAINPHHLQQAPVVL 205 (205) Q Consensus 159 t~~sRqGVt~~-~dpt~i~a~G~TGlpevD~WLaaVNP~~L~~~p~V~ 205 (205) |++|||||||+ +|||+||++|||||||||+||++||||+|+|||+|| T Consensus 198 T~~sRqGVt~ev~dP~~i~a~g~TGlpevDlwLatVNP~~L~~~p~V~ 245 (245) T protein:vir:10 198 TTASRNGVTYRAYDPAVIYRNGKTGLPEIDLWLATVNPNALMAAPTVI 245 (245) T ss_pred heeeeccceEEEecCchhhcCCCccCchhhhhhhhcCchhhccCcccC Confidence 99999999995 999999999999999999999999999999999999 No 7 >protein:vir:106490 Length: 271 # NCBI annotation: Pas19 # Family: family:all:2801 # MgeID: mge:1680 # MgeName: phiAsp2 # Cross-refs: genbank:acc:YP_024805;genbank:gi:48697420;genbank:GeneID:2846147 Probab=100.00 E-value=4.5e-105 Score=592.65 Aligned_cols=199 Identities=37% Similarity=0.652 Sum_probs=185.8 Q ss_pred CeeecccCccccccceEEeecCCC------------CCCCCCCcccCcceeeeCcceeeeCCCCCCCccCCCCceEecCC Q lcl|Aclame:pro 1 MVLWAFTGRQFGLCETTVRPCPGG------------GGPRDMRPWSQPLLWWDGTHWLNASCGCAGRCQVSGPGVVHLPS 68 (205) Q Consensus 1 ~vLWalSGRqfG~c~~tvRPCp~~------------~~~~~~~~~~~~~~~~~gg~W~n~~CGC~g~C~~~gp~~VhLpG 68 (205) -|||++||||||+|++|||||+.+ ++.++++.|++.+++ ||+|+|+ ||.+.|.+++||+||||| T Consensus 37 ~vLW~~sGRqfG~c~~tvRPc~~~r~~~g~~~~~~~pg~g~~~~w~~p~l~--gg~W~n~--gC~~~c~~~~p~~V~Lpg 112 (271) T protein:vir:10 37 SYLWGATGRRFGICPVSVRPSQTDRTELAYQAFPVAPGLGGLGEPGGPFLF--GGRWFNQ--GCATACCGNSACAVVLRG 112 (271) T ss_pred HHHHHhhCCeeecchheeccCCCccccccccccccCCccCcCcccccceec--CCceecc--cccccCCCCCCceEecCc Confidence 899999999999999999999633 334555666654444 9999999 999999999999999999 Q ss_pred CcCCeeEEEeCCeeecccceeec---C-ceEEEcCCCcCc-hhhcCCCCCCCCceEEEeccccccChhHHHHHHHHHHHH Q lcl|Aclame:pro 69 PAAEVLAVTLGDTVLDESEYVLE---G-NALYRRGGKAWP-SQDLGRPLGERGTWSVQYLRGLPVPAGGDKMAGLLAKEF 143 (205) Q Consensus 69 Pv~~v~eV~i~G~vl~p~~Y~le---~-~~L~R~~g~~WP-~Q~l~~P~gepGTw~VtY~~G~pvP~g~~~~~~~La~e~ 143 (205) ||++|+||+|||++|||++|+|| + |.|||+|++||| ||||++|+||||||+|||+||+|||+|+++++|+||||| T Consensus 113 Pv~~V~eV~i~G~vl~Ps~Y~v~v~rg~~~l~R~dg~~WP~~QdL~~P~~EpgT~aVtY~rG~pvP~g~~~a~~~LA~e~ 192 (271) T protein:vir:10 113 PVASVDEVIVGDEVVPASAYRVDVTRGAYLLVRIDGECWPMCQDFRAEPGEPGTFEITYGLGTALPVALQIATALLACEY 192 (271) T ss_pred chheeeeeeECCEeeCccceeeeeecCCeeEeecCCccCcchhhcCCCCCCCcceEEEeccCCCCChhHHHHHHHHHHHH Confidence 99999999999999999999999 5 559999999999 799999999999999999999999999999999999999 Q ss_pred HHhCCCCCccCChhhhhheecCceEE-ecCcccccCCCccchHHHHHHhhcCchhhcCCcccC Q lcl|Aclame:pro 144 VSACDGGACRLPRTVVQTTRQGVTHV-FDATKLLDLGYTGLTEVDTWLAAINPHHLQQAPVVL 205 (205) Q Consensus 144 ~~ac~g~~CrLP~~vt~~sRqGVt~~-~dpt~i~a~G~TGlpevD~WLaaVNP~~L~~~p~V~ 205 (205) ++||++++||||+|||++|||||||+ +||+ |++|||||||||+||++||||+|+|||+|+ T Consensus 193 ~~ac~~g~C~LP~~vT~~sRqGVTye~a~p~--~~~G~TGlPevDlwLatVNP~~L~~~p~V~ 253 (271) T protein:vir:10 193 AKHLTGGACALPARMTRLSRQGVEVEVAAPD--PAAGTTGVKMVDEVISTLNPGGLRRPPVVL 253 (271) T ss_pred HHhcCCCCCcCchhheeeeecceeEEEeCCC--cccCccCcchhhhhhhhcCchhhcCCceee Confidence 99999999999999999999999997 8877 699999999999999999999999999999 No 8 >protein:vir:8104 Length: 170 # NCBI annotation: gp8 # Family: family:all:3238 # MgeID: mge:152 # MgeName: Che9c # Cross-refs: genbank:acc:NP_817685;genbank:gi:29566116;genbank:GeneID:1259310 Probab=97.83 E-value=8.2e-07 Score=53.95 Aligned_cols=151 Identities=15% Similarity=0.149 Sum_probs=88.0 Q ss_pred CCCCCcccCcceeeeCccee----eeCCCCC-C--------CccCCCCceEecCC-CcCCeeEEEeCCeeecccceeec- Q lcl|Aclame:pro 27 PRDMRPWSQPLLWWDGTHWL----NASCGCA-G--------RCQVSGPGVVHLPS-PAAEVLAVTLGDTVLDESEYVLE- 91 (205) Q Consensus 27 ~~~~~~~~~~~~~~~gg~W~----n~~CGC~-g--------~C~~~gp~~VhLpG-Pv~~v~eV~i~G~vl~p~~Y~le- 91 (205) -+++.--..-.-. -=.|. +--||-+ . .=.++|=.++.||. ||-||.+|++||+.|+.++|.-+ T Consensus 1 ~~~~~a~~~~~q~--~l~aA~a~vR~~cGwhv~P~v~d~t~~ldg~G~~vl~LPt~pvvsV~sV~~~G~~l~~~~~~~~~ 78 (170) T protein:vir:81 1 MRGQFADNTEAQA--AIDAVLAAARRWCGWHVSPVIIDDVMEVDGPGGRVLSLPTLNLVSVKSVVELGYALDVSTLDRSR 78 (170) T ss_pred CcccccCchHHHH--HHHHHHHHHHHHhCCcccceecccEEEEeCCCCeeEECCCCcceeeEEEEECCeeecCccceeec Confidence 1111000000000 00000 0012222 0 11235667899996 99999999999999999988765 Q ss_pred -CceEEEcCCCcCchhhcCCCCCCCCceEEEecccc---ccChhHHHHHHHHHHHHHHhCCCCCccCChhhhhheecCce Q lcl|Aclame:pro 92 -GNALYRRGGKAWPSQDLGRPLGERGTWSVQYLRGL---PVPAGGDKMAGLLAKEFVSACDGGACRLPRTVVQTTRQGVT 167 (205) Q Consensus 92 -~~~L~R~~g~~WP~Q~l~~P~gepGTw~VtY~~G~---pvP~g~~~~~~~La~e~~~ac~g~~CrLP~~vt~~sRqGVt 167 (205) .+.|+|..| +||. .++.=.|||++|. |+|.-...++.++|+....+ .++= .+++.+=.+|+ T Consensus 79 ~~glL~r~~G-~~~~--------~~~~V~VT~tHGy~~~~apd~~~~vi~~~a~r~~~s--~~~~----~l~~~~~~~vs 143 (170) T protein:vir:81 79 RKGTLTKPYG-RWTA--------RDGAIVVTATHGFTETEAADWRRAVVQLVGRRAQTS--RPSA----DLKRKKVDDVE 143 (170) T ss_pred CCceEEecCC-cccc--------ccceEEEEEEeCCCCCccchHHHHHHHHHHHHhhcc--CCcc----cceeeecccee Confidence 466777777 6774 2778899999998 67777888888777754431 1211 23333334566 Q ss_pred EEecCcccccCCCccchHHHHHHhhcCchhhcCCc Q lcl|Aclame:pro 168 HVFDATKLLDLGYTGLTEVDTWLAAINPHHLQQAP 202 (205) Q Consensus 168 ~~~dpt~i~a~G~TGlpevD~WLaaVNP~~L~~~p 202 (205) |+|- ..+.+--+ .+|- -.++|||-..| T Consensus 144 ~~~~-----~~~~s~~~--~~~~-iL~~Yrl~~~p 170 (170) T protein:vir:81 144 YEWF-----ETAVSVDA--ELSA-VFSPFRILPSP 170 (170) T ss_pred eeec-----ccccccCH--HHHH-hhhhcccCCCC Confidence 7762 12223222 2443 67999999999 No 9 >protein:vir:101652 Length: 188 # NCBI annotation: gp15 # Family: family:all:11114 # MgeID: mge:1515 # MgeName: 244 # Cross-refs: genbank:acc:YP_654770;genbank:gi:109302768;genbank:GeneID:4156086 Probab=97.00 E-value=5.3e-06 Score=49.49 Aligned_cols=159 Identities=20% Similarity=0.208 Sum_probs=94.3 Q ss_pred ccccccceEEeecCCC----------CCCCCCCcccCcceeeeCcceeeeCCCCCCCccCCCCceEecCC----CcCCee Q lcl|Aclame:pro 9 RQFGLCETTVRPCPGG----------GGPRDMRPWSQPLLWWDGTHWLNASCGCAGRCQVSGPGVVHLPS----PAAEVL 74 (205) Q Consensus 9 RqfG~c~~tvRPCp~~----------~~~~~~~~~~~~~~~~~gg~W~n~~CGC~g~C~~~gp~~VhLpG----Pv~~v~ 74 (205) +-|-+==.++=|=+.. ...+...+| ...+..++- .++. |-+++. .||| |+.+|. T Consensus 1 ~~~~~~la~~~~~da~~v~lAL~~As~~VR~~~g~-~i~~V~~dt--~~id------~~Gg~~---~LP~~Pvv~i~~Ve 68 (188) T protein:vir:10 1 MTFAQQLADAFPEDADDAATALSWAKSQVEGYCGR-KFDLVEDDV--AIVD------PYCGSS---LLPSIPVVEISKVE 68 (188) T ss_pred CchhhhHHHhcCCCcchHHHHHHHHHHHHHHHhCC-cceeeeeee--eeee------cCCCce---eeccCcceeeeEEE Confidence 2221111111111000 000111111 122222222 2232 222222 5687 555554 Q ss_pred EEEeCCeeeccc---ceeecCceE----EE-------cCCCcCchhhcCCCCCCCCceEEEecccc-ccChhHHHHHHHH Q lcl|Aclame:pro 75 AVTLGDTVLDES---EYVLEGNAL----YR-------RGGKAWPSQDLGRPLGERGTWSVQYLRGL-PVPAGGDKMAGLL 139 (205) Q Consensus 75 eV~i~G~vl~p~---~Y~le~~~L----~R-------~~g~~WP~Q~l~~P~gepGTw~VtY~~G~-pvP~g~~~~~~~L 139 (205) .++++|+-++-- .|.+.++.+ +| ..+.+|| =.||.-+|||++|. +||.-+..++=++ T Consensus 69 ~~~~~G~~~~~v~~r~y~~~g~~~~l~~trg~pg~~~~r~~~WP--------w~p~~VtVTytHGy~evP~eiv~lv~d~ 140 (188) T protein:vir:10 69 GYLPTGNGMDWVELTNYWFKRDTGLIFDTTGLPGSEWSTGHTWP--------WLPGSLRVTYTHGYNPVPDELIDVAIRL 140 (188) T ss_pred EEeeCCcccccccccccccccceeeecccccCcccccccccccc--------cCcceEEEEEecCCCcccHHHHHHHHHH Confidence 457788876554 566666666 44 3345698 45789999999999 8999999999999 Q ss_pred HHHHHHhCCCCCccCChhhhhheecCceEEecCcccccCCCccchHHHHHHhhcCchhhcCCc Q lcl|Aclame:pro 140 AKEFVSACDGGACRLPRTVVQTTRQGVTHVFDATKLLDLGYTGLTEVDTWLAAINPHHLQQAP 202 (205) Q Consensus 140 a~e~~~ac~g~~CrLP~~vt~~sRqGVt~~~dpt~i~a~G~TGlpevD~WLaaVNP~~L~~~p 202 (205) |++++.. |.+.++.+=-..++.|. +.+-++|.++|. .-.|+|.|+... T Consensus 141 A~~~~~n--------p~~L~q~~vG~~S~tfa-----~~~~~sl~~~~~--~il~ry~l~~~~ 188 (188) T protein:vir:10 141 AREYQSN--------PELLVSKQVGEIERRFG-----SVAGTSLSKADQ--AILDRYVIATLA 188 (188) T ss_pred HHHHhcC--------cccceeeecCceeeecc-----cccCCcccchhH--HhhccccccccC Confidence 9887665 88888887766777774 267788999986 557999998777 No 10 >protein:vir:7857 Length: 188 # NCBI annotation: gp14 # Family: family:all:11114 # MgeID: mge:150 # MgeName: CJW1 # Cross-refs: genbank:acc:NP_817464;genbank:gi:29565893;genbank:GeneID:1259086 Probab=97.00 E-value=5.3e-06 Score=49.49 Aligned_cols=159 Identities=20% Similarity=0.208 Sum_probs=94.3 Q ss_pred ccccccceEEeecCCC----------CCCCCCCcccCcceeeeCcceeeeCCCCCCCccCCCCceEecCC----CcCCee Q lcl|Aclame:pro 9 RQFGLCETTVRPCPGG----------GGPRDMRPWSQPLLWWDGTHWLNASCGCAGRCQVSGPGVVHLPS----PAAEVL 74 (205) Q Consensus 9 RqfG~c~~tvRPCp~~----------~~~~~~~~~~~~~~~~~gg~W~n~~CGC~g~C~~~gp~~VhLpG----Pv~~v~ 74 (205) +-|-+==.++=|=+.. ...+...+| ...+..++- .++. |-+++. .||| |+.+|. T Consensus 1 ~~~~~~la~~~~~da~~v~lAL~~As~~VR~~~g~-~i~~V~~dt--~~id------~~Gg~~---~LP~~Pvv~i~~Ve 68 (188) T protein:vir:78 1 MTFAQQLADAFPEDADDAATALSWAKSQVEGYCGR-KFDLVEDDV--AIVD------PYCGSS---LLPSIPVVEISKVE 68 (188) T ss_pred CchhhhHHHhcCCCcchHHHHHHHHHHHHHHHhCC-cceeeeeee--eeee------cCCCce---eeccCcceeeeEEE Confidence 2221111111111000 000111111 122222222 2232 222222 5687 555554 Q ss_pred EEEeCCeeeccc---ceeecCceE----EE-------cCCCcCchhhcCCCCCCCCceEEEecccc-ccChhHHHHHHHH Q lcl|Aclame:pro 75 AVTLGDTVLDES---EYVLEGNAL----YR-------RGGKAWPSQDLGRPLGERGTWSVQYLRGL-PVPAGGDKMAGLL 139 (205) Q Consensus 75 eV~i~G~vl~p~---~Y~le~~~L----~R-------~~g~~WP~Q~l~~P~gepGTw~VtY~~G~-pvP~g~~~~~~~L 139 (205) .++++|+-++-- .|.+.++.+ +| ..+.+|| =.||.-+|||++|. +||.-+..++=++ T Consensus 69 ~~~~~G~~~~~v~~r~y~~~g~~~~l~~trg~pg~~~~r~~~WP--------w~p~~VtVTytHGy~evP~eiv~lv~d~ 140 (188) T protein:vir:78 69 GYLPTGNGMDWVELTNYWFKRDTGLIFDTTGLPGSEWSTGHTWP--------WLPGSLRVTYTHGYNPVPDELIDVAIRL 140 (188) T ss_pred EEeeCCcccccccccccccccceeeecccccCcccccccccccc--------cCcceEEEEEecCCCcccHHHHHHHHHH Confidence 457788876554 566666666 44 3345698 45789999999999 8999999999999 Q ss_pred HHHHHHhCCCCCccCChhhhhheecCceEEecCcccccCCCccchHHHHHHhhcCchhhcCCc Q lcl|Aclame:pro 140 AKEFVSACDGGACRLPRTVVQTTRQGVTHVFDATKLLDLGYTGLTEVDTWLAAINPHHLQQAP 202 (205) Q Consensus 140 a~e~~~ac~g~~CrLP~~vt~~sRqGVt~~~dpt~i~a~G~TGlpevD~WLaaVNP~~L~~~p 202 (205) |++++.. |.+.++.+=-..++.|. +.+-++|.++|. .-.|+|.|+... T Consensus 141 A~~~~~n--------p~~L~q~~vG~~S~tfa-----~~~~~sl~~~~~--~il~ry~l~~~~ 188 (188) T protein:vir:78 141 AREYQSN--------PELLVSKQVGEIERRFG-----SVAGTSLSKADQ--AILDRYVIATLA 188 (188) T ss_pred HHHHhcC--------cccceeeecCceeeecc-----cccCCcccchhH--HhhccccccccC Confidence 9887665 88888887766777774 267788999986 557999998777 No 11 >protein:vir:1435 Length: 188 # NCBI annotation: hypothetical protein # Family: family:all:501 # MgeID: mge:30 # MgeName: phiE125 # Cross-refs: genbank:acc:NP_536364;genbank:gi:17975169;genbank:GeneID:929149 Probab=96.94 E-value=1.9e-05 Score=46.50 Aligned_cols=139 Identities=18% Similarity=0.184 Sum_probs=73.7 Q ss_pred Cee-e-cccCccccccceEEeecCCCCCCCCCCcccCcceeeeCcceeeeCCCCCCCccCCCCceEecC-CCcCCeeEEE Q lcl|Aclame:pro 1 MVL-W-AFTGRQFGLCETTVRPCPGGGGPRDMRPWSQPLLWWDGTHWLNASCGCAGRCQVSGPGVVHLP-SPAAEVLAVT 77 (205) Q Consensus 1 ~vL-W-alSGRqfG~c~~tvRPCp~~~~~~~~~~~~~~~~~~~gg~W~n~~CGC~g~C~~~gp~~VhLp-GPv~~v~eV~ 77 (205) .++ . ..+-|++ || +..++.... -.|...++ .| ....+.|| +||.+|++|+ T Consensus 34 ~l~~~li~aA~~~--~E--------~~tgr~l~~-qt~~~~~~--~~--------------~~~~~~Lp~~Pv~sV~sV~ 86 (188) T protein:vir:14 34 FVERVVIPGARQA--AE--------SKAGAAIRK-ARYVEHLS--GF--------------PPAEVPLSVGQVISVDSIE 86 (188) T ss_pred HHHHHHHHHHHHH--HH--------HHhCCeeee-eeEEEEec--Cc--------------CCCceEecccCcceeeEEE Confidence 111 1 1122222 11 000110000 11111111 11 01237899 9999999998 Q ss_pred e---CC--eeecccceeecC----ceEEEcCCCcCchhhcCCCCCCCCceEEEeccccc--cChhHHHHHHHHHHHHHHh Q lcl|Aclame:pro 78 L---GD--TVLDESEYVLEG----NALYRRGGKAWPSQDLGRPLGERGTWSVQYLRGLP--VPAGGDKMAGLLAKEFVSA 146 (205) Q Consensus 78 i---~G--~vl~p~~Y~le~----~~L~R~~g~~WP~Q~l~~P~gepGTw~VtY~~G~p--vP~g~~~~~~~La~e~~~a 146 (205) + +| +.||+++|+|+. .+|+..++..||. .+...|+|+-|.+ ||+.+..+.=+++.++.+. T Consensus 87 ~~d~~g~~~~l~~~~y~l~~~~~~~~l~~~~~~~~p~---------~~~V~V~~~AG~~~~vP~~ik~Aill~va~~Y~~ 157 (188) T protein:vir:14 87 IRDASGATTTLDAGAFELVQLGRETLLVPAGQARWPY---------ARAVTIKYQAGIDLARYPSVRSWMLLAAAWAYDH 157 (188) T ss_pred EEcCCCceEeecccceEEeecCCCcEEEEecCCCCCC---------CceEEEEEEecCccCchHHHHHHHHHHHHHHHhc Confidence 8 44 478999999973 4677778888882 2569999999975 8888888888888888773 Q ss_pred CCCCCccCChhhhhheecCceEEecCcccccCCCccchH--HHHHHhhcCchhhcCCccc Q lcl|Aclame:pro 147 CDGGACRLPRTVVQTTRQGVTHVFDATKLLDLGYTGLTE--VDTWLAAINPHHLQQAPVV 204 (205) Q Consensus 147 c~g~~CrLP~~vt~~sRqGVt~~~dpt~i~a~G~TGlpe--vD~WLaaVNP~~L~~~p~V 204 (205) = ..|+ .+...+-+|. +| +-.+|||+. |.. T Consensus 158 R----------------e~~~--------~g~~~~~lP~~~v~---~Ll~pyRvP--~~~ 188 (188) T protein:vir:14 158 R----------------ELYS--------DGQPMGEMPGGYSD---VLLNPITVP--PRF 188 (188) T ss_pred c----------------cccc--------cccccccccHHHHH---HHhhccCCC--CCC Confidence 2 1111 1111122332 33 233444442 222 No 12 >protein:vir:81255 Length: 180 # NCBI annotation: gp8 # Family: family:all:3238 # MgeID: mge:1893 # MgeName: BFK20 # Cross-refs: genbank:acc:YP_001456738;genbank:gi:157168381;uniprot:Q9MBJ7;genbank:GeneID:5580378 Probab=96.55 E-value=6.3e-05 Score=43.60 Aligned_cols=158 Identities=20% Similarity=0.130 Sum_probs=88.2 Q ss_pred EeecCCCCCCCCCCcc-cCcceeeeC-cceeee-------CCCCCC--------CccCCCCceEecCC-CcCCeeEEEeC Q lcl|Aclame:pro 18 VRPCPGGGGPRDMRPW-SQPLLWWDG-THWLNA-------SCGCAG--------RCQVSGPGVVHLPS-PAAEVLAVTLG 79 (205) Q Consensus 18 vRPCp~~~~~~~~~~~-~~~~~~~~g-g~W~n~-------~CGC~g--------~C~~~gp~~VhLpG-Pv~~v~eV~i~ 79 (205) |.|=|.- .+-..... +..+..-+. -.++++ -||-+= .=.++|-.++.||. ||-||.+|++| T Consensus 1 ~~~p~~l-~p~~~~~~~~g~~~~~~~~q~~l~aA~aavRr~cGwhv~pv~~~t~~ldg~G~~~l~LPt~~vvsV~sV~~d 79 (180) T protein:vir:81 1 MQPPHGL-TPEILRTYPGGHLLSKDLTQEHVDAVVATVRKLCGWHVFPVATTEYSFPWRGDPEFLVPTKRLVSVESVTCG 79 (180) T ss_pred CCCCccC-CcchhhhhhccccCCchhhHHHHHHHHHHHHHHhCCcccceeeeEEEEecCCCeeEeCCCCcceeeeeEEEC Confidence 3332210 00000000 000000000 122222 155441 12345678899996 99999999999 Q ss_pred Ceeeccc--ceeec--CceEEEcCCCcCchhhcCCCCCCCCceEEEeccccccChhHHHHHHHHHHHHHHhCCCCCccCC Q lcl|Aclame:pro 80 DTVLDES--EYVLE--GNALYRRGGKAWPSQDLGRPLGERGTWSVQYLRGLPVPAGGDKMAGLLAKEFVSACDGGACRLP 155 (205) Q Consensus 80 G~vl~p~--~Y~le--~~~L~R~~g~~WP~Q~l~~P~gepGTw~VtY~~G~pvP~g~~~~~~~La~e~~~ac~g~~CrLP 155 (205) |+.||.+ +|.-+ .+.|+|+.| +||. | .+.=+|||++|.+.-|+...++.+.|. .++... . T Consensus 80 G~~v~~~~~~~~~~~~~G~l~r~~G-~~~r-------g-~~~V~Vt~~hGye~vP~~~aVi~~~a~---ra~~s~----~ 143 (180) T protein:vir:81 80 DLSIPNEDIVFYPYGEVNLLRRVHG-TPWR-------V-ARPMTVTMTHGYEDAPGLVGVIAQMLT---RAFTST----G 143 (180) T ss_pred CeeeCCccceecccCCCCeeEecCC-cccc-------c-cceEEEEEEeCCCCCchHHHHHHHHHH---Hhcccc----c Confidence 9999987 45553 466777777 6762 2 367799999999877766544433332 233211 1 Q ss_pred hhhhhheecCceEEecCcccccCCCccchHHHHHHhhcCchhhcCC Q lcl|Aclame:pro 156 RTVVQTTRQGVTHVFDATKLLDLGYTGLTEVDTWLAAINPHHLQQA 201 (205) Q Consensus 156 ~~vt~~sRqGVt~~~dpt~i~a~G~TGlpevD~WLaaVNP~~L~~~ 201 (205) ..+++.|=.|++|- -.+|.+---.+.+.+|.|||.-. T Consensus 144 ~~v~~~tvG~~S~~---------~~~~~~~~~~e~aiLdrYrl~~~ 180 (180) T protein:vir:81 144 GGDGNLTVGNMSYG---------LSTGITPKSSEWLIIDQYRLHPV 180 (180) T ss_pred cccccceecceeec---------cccCCCccHHHHHHHHhhhccCC Confidence 25666677777651 11344444445788999999877 No 13 >protein:vir:80320 Length: 188 # NCBI annotation: gp8, conserved hypothetical protein # Family: family:all:501 # MgeID: mge:1881 # MgeName: phi644-2 # Cross-refs: genbank:acc:YP_001111087;genbank:gi:134288682;genbank:GeneID:4960567 Probab=96.09 E-value=0.00017 Score=41.28 Aligned_cols=136 Identities=19% Similarity=0.252 Sum_probs=72.9 Q ss_pred Cee-ecc-cCccccccceEEeecCCCCCCCCCCcccCcceeeeCcceeeeCCCCCCCccCCCCceEecC-CCcCCeeEEE Q lcl|Aclame:pro 1 MVL-WAF-TGRQFGLCETTVRPCPGGGGPRDMRPWSQPLLWWDGTHWLNASCGCAGRCQVSGPGVVHLP-SPAAEVLAVT 77 (205) Q Consensus 1 ~vL-Wal-SGRqfG~c~~tvRPCp~~~~~~~~~~~~~~~~~~~gg~W~n~~CGC~g~C~~~gp~~VhLp-GPv~~v~eV~ 77 (205) .++ ..+ +-|++ || +..++.... -.|...+++ | ++ ..+.|| +||.+|++|+ T Consensus 34 ~l~~~lI~aA~~~--~E--------~~~gr~l~~-qt~~~~~~~--~-----~~---------~~i~Lp~~PV~sV~sV~ 86 (188) T protein:vir:80 34 FVERIVIPGARQA--AE--------SKSGAAIRK-ARYVERLSG--F-----PL---------AEISLSVGQVIRVDSIE 86 (188) T ss_pred HHHHHHHHHHHHH--HH--------HHhCCeeee-eeEEEEecC--C-----CC---------CceEecccccceeeEEE Confidence 111 111 12222 11 001111110 112222111 1 11 127899 9999999999 Q ss_pred e---CC--eeecccceeecC----ceEEEcCCCcCchhhcCCCCCCCCceEEEecccc--ccChhHHHHHHHHHHHHHHh Q lcl|Aclame:pro 78 L---GD--TVLDESEYVLEG----NALYRRGGKAWPSQDLGRPLGERGTWSVQYLRGL--PVPAGGDKMAGLLAKEFVSA 146 (205) Q Consensus 78 i---~G--~vl~p~~Y~le~----~~L~R~~g~~WP~Q~l~~P~gepGTw~VtY~~G~--pvP~g~~~~~~~La~e~~~a 146 (205) + +| +.||+++|+++. .+|+...+..||. .+-..|+|+=|. .||+.+..++=+|+.++.+. T Consensus 87 ~~d~~G~~~~l~~~~y~l~~~~~~~~l~~~~~~~~p~---------~~~V~V~~~AG~~~~vP~~ik~aill~va~~Ye~ 157 (188) T protein:vir:80 87 IRDASGATTTLDADAFELVQLGREALLVPEGQARWPF---------ARAVTITYQAGVDLARYPSVRTWMLLAAAWAYDH 157 (188) T ss_pred EEcCCCcEEeecccceEEeecCCCcEEEEecCCCCCC---------CceEEEEEEecccccChHHHHHHHHHHHHHHHhc Confidence 8 66 478999999962 4688888878883 235889999885 67888888888888888773 Q ss_pred CC----C-CCccCChhhhhheecCceEEecCcccccCCCccchHHHHHHhhcCchhhcCCccc Q lcl|Aclame:pro 147 CD----G-GACRLPRTVVQTTRQGVTHVFDATKLLDLGYTGLTEVDTWLAAINPHHLQQAPVV 204 (205) Q Consensus 147 c~----g-~~CrLP~~vt~~sRqGVt~~~dpt~i~a~G~TGlpevD~WLaaVNP~~L~~~p~V 204 (205) =+ | ....+|..+ +| +-.+|||+. |.. T Consensus 158 Re~~~~g~~~~~~P~~~---------------------------v~---~Ll~pyRvp--~~~ 188 (188) T protein:vir:80 158 RELFSEGQPIGEMPGGY---------------------------AD---VLLNPITVP--PRF 188 (188) T ss_pred ccccccccccccccHHH---------------------------HH---HHhhccCCC--CCC Confidence 21 1 123455442 22 122333321 111 No 14 >protein:vir:8430 Length: 189 # NCBI annotation: gp25 # Family: family:all:3238 # MgeID: mge:155 # MgeName: Omega # Cross-refs: genbank:acc:NP_818326;genbank:gi:29566762;genbank:GeneID:1260021 Probab=86.79 E-value=0.024 Score=29.44 Aligned_cols=166 Identities=18% Similarity=0.161 Sum_probs=82.9 Q ss_pred ccccccceEEeecCCCCCC-----------------CCCCcccCcceeeeCcceeeeCCCCCCCccCCCCceEecC-CCc Q lcl|Aclame:pro 9 RQFGLCETTVRPCPGGGGP-----------------RDMRPWSQPLLWWDGTHWLNASCGCAGRCQVSGPGVVHLP-SPA 70 (205) Q Consensus 9 RqfG~c~~tvRPCp~~~~~-----------------~~~~~~~~~~~~~~gg~W~n~~CGC~g~C~~~gp~~VhLp-GPv 70 (205) +---+-|..+++=+.+.-. +..-+|- -+|..+...= =-+.|-.++.|| =|+ T Consensus 1 ~~~el~p~~~~~~~~g~l~Add~~~q~aLdAA~a~vRr~CGWH-V~PV~~dtv~----------vdg~G~svL~LPTlrl 69 (189) T protein:vir:84 1 MAEELTPEDVDTYTQGRIDKDDPETARALAAALSRARRACGWH-VTPVVESTVR----------LHGSGHDFIVLPTLKP 69 (189) T ss_pred CcccccchhcchhhcceeccCChhHHHHHHHHHHHHHHhhCCc-ccceeeeeEE----------EcCCCCceEecCCccc Confidence 0000111111111111000 0001111 1222222111 123445788999 799 Q ss_pred CCeeEEEeCCeeecccc--eeecC-ceEEEcCCCcCchhhcCCCCCCCCceEEEeccccc-cCh-hHHHHHHHHHHHHHH Q lcl|Aclame:pro 71 AEVLAVTLGDTVLDESE--YVLEG-NALYRRGGKAWPSQDLGRPLGERGTWSVQYLRGLP-VPA-GGDKMAGLLAKEFVS 145 (205) Q Consensus 71 ~~v~eV~i~G~vl~p~~--Y~le~-~~L~R~~g~~WP~Q~l~~P~gepGTw~VtY~~G~p-vP~-g~~~~~~~La~e~~~ 145 (205) -+|.+|++||+.++-+. |.-+. +.|+|..| .||. |+-+|||++|.+ +|+ .+..++..+|...-. T Consensus 70 vsV~sVt~dG~~~~~~~v~~~~~~~Gll~r~~G-w~~~----------g~I~VT~tHGy~~~pa~di~~vv~~mA~rA~~ 138 (189) T protein:vir:84 70 VELLSITEDGEEVDLDEVYFVSREPGVLYKKCG-WWCR----------GPIEVTLTHGFTAEEAGDFREVVLQAVDVANL 138 (189) T ss_pred eeeeeeeecCeecccccceeccCCcceeEeCCC-cccC----------CeEEEEEEcCCCCCCchhHHHHHHHHHHhhhc Confidence 99999999999999997 65544 66777666 6762 578999999995 663 677777777754311 Q ss_pred hCCCCCccCChhhhhheecCceEEecCcccccCCCccchHHHHHHhhcCchhhcCCc Q lcl|Aclame:pro 146 ACDGGACRLPRTVVQTTRQGVTHVFDATKLLDLGYTGLTEVDTWLAAINPHHLQQAP 202 (205) Q Consensus 146 ac~g~~CrLP~~vt~~sRqGVt~~~dpt~i~a~G~TGlpevD~WLaaVNP~~L~~~p 202 (205) . .+.+--.| .|+..=--|+|++---..-.-++.-=|+.|.-|.+ +||..-. T Consensus 139 ~-~~~~~~g~--~~~~~v~dv~~r~~~~~~~~~~~~~~~~l~~~~~~---~~~~~~~ 189 (189) T protein:vir:84 139 M-VGTGATGP--ITGLEVDDVNMRWSGLVDRSWGIAKNPMLESVLYQ---YRLVAIA 189 (189) T ss_pred c-CCCccccc--ccceeecceeeehhhhcccccccccchHHHHHHhh---hhhhccC Confidence 1 11111122 12222233445542222222355555677766654 3332222 No 15 >protein:vir:3160 Length: 198 # NCBI annotation: unknown # Family: family:all:28414 # MgeID: mge:316 # MgeName: PhiCh1 # Cross-refs: genbank:acc:NP_665931;genbank:gi:22091117;genbank:GeneID:951344 Probab=85.83 E-value=0.032 Score=28.78 Aligned_cols=167 Identities=16% Similarity=0.165 Sum_probs=87.4 Q ss_pred eEEeecCCCC-----------CCCCCCccc-------CcceeeeCcceeeeCCCC--CCCccCCCCceEecC-CCcCCee Q lcl|Aclame:pro 16 TTVRPCPGGG-----------GPRDMRPWS-------QPLLWWDGTHWLNASCGC--AGRCQVSGPGVVHLP-SPAAEVL 74 (205) Q Consensus 16 ~tvRPCp~~~-----------~~~~~~~~~-------~~~~~~~gg~W~n~~CGC--~g~C~~~gp~~VhLp-GPv~~v~ 74 (205) .-.+|.-... +--...... |=.---..|+|+-.-=.- .++=+.+|=....|| -||-+|+ T Consensus 1 ~~~~~~~~~~~~~~dKk~Lgv~~d~~D~~le~LIa~ASa~~E~~~Gr~L~a~d~t~d~~r~~G~g~~~L~LPq~PV~sVs 80 (198) T protein:vir:31 1 MPLEPSDVESELPFDAKAFGWSEEKFKSELETYIAAATETVEKWINTTLEPETVTRDLSRPSHVDGHDLPMPSRPVQDVV 80 (198) T ss_pred CCCCcccccccCchhhHhhcccccchhhHHHHHHHHHHHHHHHhhCcEeccccceeccCcccCCCcceeecCCCCcceeE Confidence 2223331000 000000000 000001124443321000 123345677888999 9999999 Q ss_pred EEEeC-----CeeecccceeecC-ceEEEcCCCcCchhhcCCCCCCCCceEEEecccc-ccChhHHHHHHHHHHHHHHhC Q lcl|Aclame:pro 75 AVTLG-----DTVLDESEYVLEG-NALYRRGGKAWPSQDLGRPLGERGTWSVQYLRGL-PVPAGGDKMAGLLAKEFVSAC 147 (205) Q Consensus 75 eV~i~-----G~vl~p~~Y~le~-~~L~R~~g~~WP~Q~l~~P~gepGTw~VtY~~G~-pvP~g~~~~~~~La~e~~~ac 147 (205) +|+|| |..++.-+|-|+- ..++..+. +||+ =+.+.-.-+|+|+.|. +||+-+.+++=+|+...+++- T Consensus 81 SV~iD~~~~~g~~v~~~dy~l~~~~~~~~~G~-~r~~-----~p~~~rnV~V~y~AGye~VPeDikeAVI~lv~~~~~e~ 154 (198) T protein:vir:31 81 SVTIDTDRAMGRDVDEDDYWVEETHLELKPGA-DRKS-----WPTDRRCITVEWEYGYEEVPESPKKAIIRLVRARLRAI 154 (198) T ss_pred EEEEecCccccccccchhhhhhhhhhhhcccc-cccc-----cccccceEEEEeecCccccchHHHHHHHHHHHHHHhhh Confidence 99999 6667776676653 33444333 3332 1123336789999996 699999999999999999987 Q ss_pred CCCCccCChhhhhheecCceEEecCcc--cccCCCc-cchHHHHHHhhcC Q lcl|Aclame:pro 148 DGGACRLPRTVVQTTRQGVTHVFDATK--LLDLGYT-GLTEVDTWLAAIN 194 (205) Q Consensus 148 ~g~~CrLP~~vt~~sRqGVt~~~dpt~--i~a~G~T-GlpevD~WLaaVN 194 (205) ... -+++-|=+|=++.|+|-. +.++.|- -=.|.--...-|. T Consensus 155 ~~~------Gi~s~T~~gesvSy~~~~e~~~~~~~~~~~~~~~~~~~~~~ 198 (198) T protein:vir:31 155 NAE------GISSDTIMGDSISYDPEDEVVLAARKDVAGFEAPSYYGGVE 198 (198) T ss_pred hcc------cceeeeecCcceeecCcccchhhhhhhhccccCcccccCCC Confidence 554 278888888888877321 2222210 0011111111111 No 16 >protein:vir:8326 Length: 201 # NCBI annotation: gp43 # Family: family:all:3238 # MgeID: mge:154 # MgeName: Corndog # Cross-refs: genbank:acc:NP_817894;genbank:gi:29566327;genbank:GeneID:1259522 Probab=81.18 E-value=0.047 Score=27.86 Aligned_cols=158 Identities=18% Similarity=0.143 Sum_probs=76.0 Q ss_pred CCCCCCCCCCcccCcceeeeCcc------eeee----CCCCC---------CCccCCCCceEecC-CCcCCeeEEEeCCe Q lcl|Aclame:pro 22 PGGGGPRDMRPWSQPLLWWDGTH------WLNA----SCGCA---------GRCQVSGPGVVHLP-SPAAEVLAVTLGDT 81 (205) Q Consensus 22 p~~~~~~~~~~~~~~~~~~~gg~------W~n~----~CGC~---------g~C~~~gp~~VhLp-GPv~~v~eV~i~G~ 81 (205) =..-++.-...+..-.+..+++. |... .||=+ -.+-.+|-.++.|| =|+-+|.+|++||+ T Consensus 1 m~eL~P~dl~~~~~g~l~a~d~~~Q~aLdAA~aavRr~CGWHV~Pvv~dd~v~ldg~G~~vL~LPT~rLvsV~SVte~G~ 80 (201) T protein:vir:83 1 MAELSEADVESFTRGRLLANDGETKKMLDAALLTARRYCGWKVTPVVTDDVMVLDGPDSRILNLPTRKLVTLSELFERGN 80 (201) T ss_pred CccccchhcchhhcCccccCChHHHHHHHHHHHHHHHHhCccceeeeeeeeEEEcCCCCeeEEcCCcccceeEEEeeCCE Confidence 00000111111111111111110 1000 25522 13667788999999 89999999999999 Q ss_pred eecccceeec--C-------c-eEEEcCCCcCchhhcCCCCCCCCceEEEeccccccChh-HHHHHHHHHHHHHH-hCCC Q lcl|Aclame:pro 82 VLDESEYVLE--G-------N-ALYRRGGKAWPSQDLGRPLGERGTWSVQYLRGLPVPAG-GDKMAGLLAKEFVS-ACDG 149 (205) Q Consensus 82 vl~p~~Y~le--~-------~-~L~R~~g~~WP~Q~l~~P~gepGTw~VtY~~G~pvP~g-~~~~~~~La~e~~~-ac~g 149 (205) .||-+.++.- | . .|.++.|. ||+ |+=+.=.|||++|..=+|+ ...++=..|..-++ .-.- T Consensus 81 ~i~~~~~~~s~~G~~~~~~~~~ll~~r~gg-~w~-------~~~~~V~VT~tHGy~~~pa~d~~~vv~~a~~~~~q~~~t 152 (201) T protein:vir:83 81 PVDLSKVRWSAGGPPGSSSRPIAVRKRNGG-WWT-------GEYQGIEVKMTHGYTEDEAADWRLAVLSMVDQMSQTLAS 152 (201) T ss_pred eccCCceeeecCCcccccccccceeeecCc-CCc-------CccceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhhhc Confidence 9998766541 1 1 23333333 664 3334578999999865554 44443333322222 2222 Q ss_pred CCccCChhhhhheecCceEE-ecCcccccC----------CCccchHHHHHH Q lcl|Aclame:pro 150 GACRLPRTVVQTTRQGVTHV-FDATKLLDL----------GYTGLTEVDTWL 190 (205) Q Consensus 150 ~~CrLP~~vt~~sRqGVt~~-~dpt~i~a~----------G~TGlpevD~WL 190 (205) +.--.| .+..+=-+|+|+ +||-.+-+- -.+-||-|+. | T Consensus 153 G~~s~~--l~~~~v~~v~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 201 (201) T protein:vir:83 153 GRGELD--LLSKKVDDVTYRWGDPYADSAQQALFSVTSVFDNFTLPCVEF-L 201 (201) T ss_pred cccccc--ceeeeeeccchhhccccchhHHHHHHHHHHHHhccccchhhc-C Confidence 222333 344455688888 777543110 0112222221 1 Done!