Query lcl|Aclame:protein:vir:7853|NCBI_annot:gp10|genbank:acc:NP_817460;genbank:gi:29565889;genbank:GeneID:1259085 Match_columns 518 No_of_seqs 205 out of 1170 Neff 9.5 Searched_HMMs 1612 Date Sat Nov 30 17:59:06 2013 Command /home/guerois/workspace/virfam/python/lib/hhsearch//hhsearch2 -i .//seq/seq_10 -d /home/guerois/workspace/virfam/python/profile_database/capsid_neck_tail.hhm -glob -cpu 7 -o .//seq/HHR/seq_10_vs_rec_db.hhr No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM 1 protein:vir:7853 Length: 518 # 100.0 2E-136 1E-139 764.7 49.0 518 1-518 1-518 (518) 2 protein:vir:101648 Length: 518 100.0 7E-136 4E-139 761.5 49.0 518 1-518 1-518 (518) 3 protein:vir:93610 Length: 454 100.0 8E-100 5E-103 563.8 45.0 443 1-462 3-454 (454) 4 protein:vir:6240 Length: 457 # 100.0 2.3E-97 1E-100 550.4 44.2 441 1-449 6-457 (457) 5 protein:vir:102118 Length: 409 100.0 5.4E-97 3E-100 548.4 43.2 402 1-415 1-409 (409) 6 protein:vir:100249 Length: 431 100.0 2.8E-96 1.7E-99 544.4 43.4 399 1-424 6-431 (431) 7 protein:vir:4337 Length: 434 # 100.0 6E-96 3.7E-99 542.6 43.1 411 1-436 19-434 (434) 8 protein:vir:1266 Length: 416 # 100.0 2.4E-95 1.5E-98 539.3 44.2 410 1-436 1-416 (416) 9 protein:vir:1326 Length: 457 # 100.0 2.5E-95 1.6E-98 539.2 43.8 439 1-448 6-457 (457) 10 protein:vir:1431 Length: 419 # 100.0 2.1E-95 1.3E-98 539.6 43.0 412 1-450 1-419 (419) 11 protein:vir:105064 Length: 421 100.0 3.4E-95 2.1E-98 538.5 43.7 414 1-444 1-421 (421) 12 protein:vir:1884 Length: 424 # 100.0 2.8E-95 1.7E-98 539.0 42.7 395 1-416 22-424 (424) 13 protein:vir:102080 Length: 429 100.0 6.1E-95 3.8E-98 537.1 44.2 413 1-431 6-429 (429) 14 protein:vir:4509 Length: 424 # 100.0 4.9E-95 3E-98 537.6 43.3 400 1-431 17-424 (424) 15 protein:vir:1380 Length: 422 # 100.0 3.6E-95 2.3E-98 538.3 41.7 409 1-431 6-422 (422) 16 protein:vir:102855 Length: 432 100.0 1.4E-94 8.4E-98 535.2 44.7 414 1-434 9-432 (432) 17 protein:vir:107605 Length: 432 100.0 1.4E-94 8.4E-98 535.2 44.7 414 1-434 9-432 (432) 18 protein:vir:105002 Length: 432 100.0 1.4E-94 8.4E-98 535.2 44.7 414 1-434 9-432 (432) 19 protein:vir:4454 Length: 414 # 100.0 9.3E-95 5.8E-98 536.1 43.6 407 1-423 6-414 (414) 20 protein:vir:189 Length: 424 # 100.0 8.3E-95 5.1E-98 536.4 42.4 395 1-416 22-424 (424) 21 protein:vir:483 Length: 413 # 100.0 2.2E-94 1.4E-97 534.0 44.4 407 1-423 1-413 (413) 22 protein:vir:81152 Length: 411 100.0 1.7E-94 1.1E-97 534.6 42.6 398 1-415 6-411 (411) 23 protein:vir:5737 Length: 419 # 100.0 2.2E-94 1.4E-97 534.0 42.8 411 1-435 1-419 (419) 24 protein:vir:10362 Length: 432 100.0 2.8E-94 1.7E-97 533.5 42.1 411 1-436 8-432 (432) 25 protein:vir:100150 Length: 437 100.0 3.9E-94 2.4E-97 532.7 42.0 422 1-442 7-437 (437) 26 protein:vir:97060 Length: 432 100.0 6.9E-94 4.3E-97 531.3 42.3 410 1-436 8-432 (432) 27 protein:vir:80333 Length: 419 100.0 8.1E-94 5E-97 530.9 41.2 412 1-461 1-419 (419) 28 protein:vir:81072 Length: 432 100.0 3.9E-93 2.4E-96 527.2 42.2 411 1-436 8-432 (432) 29 protein:vir:98396 Length: 441 100.0 4.8E-92 3E-95 521.2 44.2 413 1-432 27-441 (441) 30 protein:vir:9408 Length: 441 # 100.0 5.4E-92 3.4E-95 520.9 44.3 412 1-431 27-441 (441) 31 protein:vir:79984 Length: 441 100.0 5.4E-92 3.4E-95 520.9 44.3 412 1-431 27-441 (441) 32 protein:vir:81218 Length: 423 100.0 7.4E-92 4.6E-95 520.2 42.9 403 1-424 6-423 (423) 33 protein:vir:101647 Length: 460 100.0 1.6E-91 1E-94 518.3 39.8 408 1-418 7-460 (460) 34 protein:vir:4598 Length: 416 # 100.0 1.1E-90 6.7E-94 513.8 44.1 413 1-435 2-416 (416) 35 protein:vir:81095 Length: 416 100.0 1.1E-90 6.7E-94 513.8 44.1 413 1-435 2-416 (416) 36 protein:vir:8418 Length: 409 # 100.0 1E-90 6.3E-94 514.0 42.8 401 1-432 6-409 (409) 37 protein:vir:2683 Length: 412 # 100.0 7.4E-91 4.6E-94 514.7 41.9 408 1-436 1-412 (412) 38 protein:vir:93943 Length: 409 100.0 9.3E-91 5.8E-94 514.2 41.7 402 1-436 5-409 (409) 39 protein:vir:102727 Length: 945 100.0 2.9E-89 1.8E-92 506.0 48.4 506 1-518 63-616 (945) 40 protein:vir:94426 Length: 409 100.0 2.3E-90 1.4E-93 512.1 42.2 402 1-436 5-409 (409) 41 protein:vir:96980 Length: 409 100.0 2E-90 1.3E-93 512.3 41.9 402 1-436 5-409 (409) 42 protein:vir:3868 Length: 417 # 100.0 2.9E-90 1.8E-93 511.4 42.2 412 1-442 1-417 (417) 43 protein:vir:94666 Length: 723 100.0 2.5E-89 1.6E-92 506.3 43.5 488 14-518 1-539 (723) 44 protein:vir:9702 Length: 406 # 100.0 1.5E-88 9.1E-92 502.1 42.5 404 1-432 1-406 (406) 45 protein:vir:8100 Length: 466 # 100.0 4E-86 2.5E-89 488.7 41.9 419 1-434 6-466 (466) 46 protein:vir:8317 Length: 409 # 100.0 2E-86 1.2E-89 490.4 38.4 371 1-400 33-409 (409) 47 protein:vir:960 Length: 413 # 100.0 8.4E-86 5.2E-89 487.0 41.0 395 1-421 14-413 (413) 48 protein:vir:3843 Length: 397 # 100.0 1.6E-84 1E-87 480.0 41.3 397 1-439 1-397 (397) 49 protein:vir:104259 Length: 403 100.0 7.2E-84 4.5E-87 476.4 40.7 385 14-431 1-403 (403) 50 protein:vir:80796 Length: 574 100.0 1.6E-83 9.7E-87 474.6 41.7 480 1-489 40-574 (574) 51 protein:vir:80644 Length: 551 100.0 1.5E-83 9.3E-87 474.7 39.6 463 1-470 39-551 (551) 52 protein:vir:95378 Length: 406 100.0 5.3E-83 3.3E-86 471.6 42.4 396 1-433 2-406 (406) 53 protein:vir:96579 Length: 576 100.0 2.4E-83 1.5E-86 473.5 39.0 482 1-494 34-576 (576) 54 protein:vir:80134 Length: 403 100.0 1.1E-82 6.7E-86 469.9 41.0 394 1-432 5-403 (403) 55 protein:vir:9359 Length: 348 # 100.0 2.2E-82 1.3E-85 468.3 38.5 346 63-434 1-348 (348) 56 protein:vir:63755 Length: 547 100.0 2.5E-81 1.6E-84 462.4 39.6 463 1-470 30-547 (547) 57 protein:vir:7407 Length: 392 # 100.0 2.1E-81 1.3E-84 462.9 37.5 388 1-416 1-392 (392) 58 protein:vir:100691 Length: 535 100.0 2.8E-80 1.7E-83 456.7 36.8 448 1-477 12-535 (535) 59 protein:vir:1023 Length: 392 # 100.0 6.8E-80 4.2E-83 454.6 37.6 385 1-416 1-392 (392) 60 protein:vir:3989 Length: 392 # 100.0 6.8E-80 4.2E-83 454.6 37.6 385 1-416 1-392 (392) 61 protein:vir:6210 Length: 394 # 100.0 8.5E-80 5.3E-83 454.1 38.1 388 1-432 1-394 (394) 62 protein:vir:4854 Length: 386 # 100.0 2.7E-79 1.7E-82 451.3 39.2 383 1-432 2-386 (386) 63 protein:vir:99312 Length: 563 100.0 1.5E-79 9.2E-83 452.8 37.2 468 1-493 44-563 (563) 64 protein:vir:95599 Length: 563 100.0 1.5E-79 9.2E-83 452.8 37.2 468 1-493 44-563 (563) 65 protein:vir:4194 Length: 540 # 100.0 1.4E-78 8.9E-82 447.4 40.2 484 2-518 1-529 (540) 66 protein:vir:100187 Length: 385 100.0 2E-78 1.2E-81 446.6 39.5 375 1-414 2-385 (385) 67 protein:vir:3153 Length: 467 # 100.0 3.8E-78 2.4E-81 445.0 39.7 405 42-451 1-467 (467) 68 protein:vir:95965 Length: 385 100.0 6.1E-78 3.8E-81 443.9 36.2 370 1-413 6-385 (385) 69 protein:vir:101289 Length: 395 100.0 3E-77 1.9E-80 440.1 39.4 382 1-434 6-395 (395) 70 protein:vir:9507 Length: 395 # 100.0 3E-77 1.9E-80 440.1 39.4 382 1-434 6-395 (395) 71 protein:vir:100650 Length: 395 100.0 3E-77 1.9E-80 440.1 39.4 382 1-434 6-395 (395) 72 protein:vir:4995 Length: 384 # 100.0 1.7E-77 1E-80 441.5 35.3 372 1-394 2-384 (384) 73 protein:vir:100882 Length: 383 100.0 2.5E-76 1.6E-79 435.0 39.5 372 1-431 2-383 (383) 74 protein:vir:4828 Length: 382 # 100.0 1.8E-76 1.1E-79 435.8 38.7 378 1-414 2-382 (382) 75 protein:vir:4156 Length: 542 # 100.0 6.5E-76 4E-79 432.8 40.6 487 2-518 1-539 (542) 76 protein:vir:4952 Length: 386 # 100.0 1.3E-75 8E-79 431.1 39.5 385 1-433 2-386 (386) 77 protein:vir:4089 Length: 395 # 100.0 9.2E-76 5.7E-79 432.0 37.2 384 14-435 1-395 (395) 78 protein:vir:78310 Length: 376 100.0 5.9E-76 3.6E-79 433.0 34.5 365 1-409 6-376 (376) 79 protein:vir:1082 Length: 359 # 100.0 2.9E-75 1.8E-78 429.2 36.9 350 1-386 2-359 (359) 80 protein:vir:9641 Length: 395 # 100.0 3.3E-75 2E-78 428.9 34.6 379 1-421 5-395 (395) 81 protein:vir:79772 Length: 648 100.0 4.4E-72 2.7E-75 411.8 43.3 500 1-518 15-609 (648) 82 protein:vir:94002 Length: 378 100.0 2.3E-73 1.4E-76 418.8 36.1 359 1-435 2-378 (378) 83 protein:vir:98643 Length: 395 100.0 2.5E-73 1.6E-76 418.6 35.3 381 1-421 2-395 (395) 84 protein:vir:93867 Length: 378 100.0 3.8E-73 2.3E-76 417.6 35.9 360 1-435 1-378 (378) 85 protein:vir:1661 Length: 378 # 100.0 1.3E-72 7.9E-76 414.7 36.4 359 1-435 2-378 (378) 86 protein:vir:99452 Length: 651 100.0 4.3E-72 2.7E-75 411.8 36.3 480 1-518 12-610 (651) 87 protein:vir:858 Length: 378 # 100.0 4.6E-71 2.8E-74 406.2 35.7 359 1-435 2-378 (378) 88 protein:vir:94869 Length: 378 100.0 2.5E-70 1.6E-73 402.1 35.5 359 1-435 2-378 (378) 89 protein:vir:78641 Length: 278 100.0 1.5E-63 9.2E-67 365.0 31.7 276 63-350 1-278 (278) 90 protein:vir:103971 Length: 376 100.0 1E-58 6.4E-62 338.5 30.9 313 1-357 54-376 (376) 91 protein:vir:79150 Length: 368 100.0 2E-59 1.2E-62 342.4 26.2 337 3-369 1-368 (368) 92 protein:vir:79207 Length: 351 100.0 9.9E-58 6.1E-61 333.1 30.4 316 3-357 1-351 (351) 93 protein:vir:78191 Length: 351 100.0 1.5E-57 9.3E-61 332.1 30.4 316 3-357 1-351 (351) 94 protein:vir:98567 Length: 340 100.0 1.8E-57 1.1E-60 331.7 29.7 313 2-354 1-340 (340) 95 protein:vir:100328 Length: 346 100.0 4E-57 2.5E-60 329.8 31.4 332 3-355 1-346 (346) 96 protein:vir:267 Length: 348 # 100.0 4.8E-57 3E-60 329.3 31.0 319 1-361 20-348 (348) 97 protein:vir:3743 Length: 345 # 100.0 2.1E-56 1.3E-59 325.9 30.5 320 3-352 1-345 (345) 98 protein:vir:1150 Length: 350 # 100.0 3.1E-56 1.9E-59 324.9 29.5 328 3-350 1-350 (350) 99 protein:vir:3780 Length: 345 # 100.0 1.4E-55 8.5E-59 321.4 30.6 330 3-352 1-345 (345) 100 protein:vir:6058 Length: 344 # 100.0 1.8E-55 1.1E-58 320.7 29.8 326 2-355 1-344 (344) 101 protein:vir:5691 Length: 344 # 100.0 1.4E-55 8.9E-59 321.3 28.6 325 3-355 1-344 (344) 102 protein:vir:2013 Length: 344 # 100.0 5.2E-55 3.2E-58 318.2 28.3 324 3-355 1-344 (344) 103 protein:vir:78749 Length: 337 100.0 1.3E-54 8.2E-58 316.0 27.4 321 3-351 1-337 (337) 104 protein:vir:4698 Length: 251 # 100.0 2.2E-50 1.4E-53 292.8 27.1 248 1-261 1-251 (251) 105 protein:vir:98853 Length: 219 100.0 1.9E-45 1.2E-48 265.8 21.9 210 139-354 1-219 (219) 106 protein:vir:5249 Length: 437 # 99.9 2.5E-27 1.5E-30 166.5 29.6 392 1-431 1-437 (437) 107 protein:vir:107742 Length: 537 99.9 5.4E-25 3.3E-28 153.6 31.1 424 1-451 26-537 (537) 108 protein:vir:108215 Length: 469 99.9 2.9E-24 1.8E-27 149.6 34.8 422 3-468 1-469 (469) 109 protein:vir:94049 Length: 532 99.9 7.5E-25 4.6E-28 152.9 30.1 434 1-467 33-532 (532) 110 protein:vir:99232 Length: 526 99.9 7.3E-23 4.5E-26 142.0 38.9 472 1-518 6-517 (526) 111 protein:vir:103860 Length: 528 99.9 8.8E-23 5.4E-26 141.5 38.4 475 1-518 6-519 (528) 112 protein:vir:79233 Length: 526 99.9 5.9E-23 3.7E-26 142.5 37.4 472 1-518 6-517 (526) 113 protein:vir:79538 Length: 502 99.9 7.3E-25 4.5E-28 152.9 21.9 419 1-440 9-502 (502) 114 protein:vir:389 Length: 530 # 99.9 1.8E-24 1.1E-27 150.8 22.8 424 1-435 5-530 (530) 115 protein:vir:3420 Length: 533 # 99.9 2.3E-24 1.4E-27 150.2 23.0 431 1-445 1-533 (533) 116 protein:vir:6382 Length: 553 # 99.9 3.1E-24 1.9E-27 149.4 21.6 428 1-440 1-553 (553) 117 protein:vir:99853 Length: 488 99.9 5.3E-22 3.3E-25 137.2 33.6 448 1-518 4-485 (488) 118 protein:vir:96738 Length: 505 99.9 5.9E-24 3.6E-27 148.0 21.6 420 3-437 1-505 (505) 119 protein:vir:79063 Length: 491 99.9 1.9E-20 1.2E-23 128.7 39.0 450 1-518 7-488 (491) 120 protein:vir:1986 Length: 512 # 99.9 5.8E-21 3.6E-24 131.5 35.1 455 1-518 6-505 (512) 121 protein:vir:107880 Length: 491 99.9 2.2E-20 1.4E-23 128.4 37.3 450 1-518 4-488 (491) 122 protein:vir:96068 Length: 765 99.9 4.9E-22 3.1E-25 137.4 26.6 486 1-518 60-618 (765) 123 protein:vir:99563 Length: 862 99.9 1.9E-21 1.2E-24 134.2 28.8 484 1-518 76-669 (862) 124 protein:vir:80040 Length: 461 99.9 1.4E-21 9E-25 134.8 27.9 397 2-436 1-461 (461) 125 protein:vir:10321 Length: 495 99.9 4.8E-22 2.9E-25 137.5 24.8 420 1-436 1-495 (495) 126 protein:vir:79647 Length: 435 99.8 2.6E-21 1.6E-24 133.5 27.7 385 1-431 2-435 (435) 127 protein:vir:104338 Length: 422 99.8 5.6E-21 3.5E-24 131.6 28.4 375 14-436 1-422 (422) 128 protein:vir:79511 Length: 448 99.8 2.1E-20 1.3E-23 128.4 30.5 408 3-455 1-448 (448) 129 protein:vir:77981 Length: 448 99.8 2.2E-20 1.4E-23 128.3 29.8 407 3-459 1-448 (448) 130 protein:vir:95542 Length: 548 99.8 2.8E-21 1.7E-24 133.3 22.2 454 1-468 2-548 (548) 131 protein:vir:98816 Length: 446 99.8 2.8E-20 1.7E-23 127.8 26.8 376 1-389 3-446 (446) 132 protein:vir:95254 Length: 488 99.8 4.6E-19 2.8E-22 121.1 32.9 421 3-447 1-488 (488) 133 protein:vir:107662 Length: 427 99.8 1.3E-19 7.9E-23 124.2 25.5 376 1-435 2-427 (427) 134 protein:vir:78161 Length: 355 99.6 6.3E-16 3.9E-19 103.9 25.4 325 117-468 1-355 (355) 135 protein:vir:105782 Length: 449 99.5 2.1E-14 1.3E-17 95.6 25.0 388 3-435 1-449 (449) 136 protein:vir:106491 Length: 646 99.4 3.3E-12 2E-15 83.5 28.5 504 1-518 1-601 (646) 137 protein:vir:106716 Length: 698 99.4 2.4E-13 1.5E-16 89.7 19.4 485 1-518 54-640 (698) 138 protein:vir:78589 Length: 695 99.3 8.3E-13 5.1E-16 86.8 19.8 488 1-518 54-656 (695) 139 protein:vir:101541 Length: 694 99.3 3.2E-12 2E-15 83.6 21.1 488 1-518 50-655 (694) 140 protein:vir:3648 Length: 695 # 99.3 1.8E-12 1.1E-15 84.9 19.4 487 1-518 71-656 (695) 141 protein:vir:102426 Length: 631 99.3 7.4E-12 4.6E-15 81.6 22.5 496 1-518 8-607 (631) 142 protein:vir:106027 Length: 629 99.3 3.8E-12 2.4E-15 83.2 20.5 503 1-518 7-601 (629) 143 protein:vir:8654 Length: 629 # 99.2 3.6E-11 2.2E-14 77.8 24.0 492 1-518 7-605 (629) 144 protein:vir:99088 Length: 629 99.2 6.6E-11 4.1E-14 76.4 24.0 492 1-518 7-605 (629) 145 protein:vir:5839 Length: 533 # 99.1 5.5E-10 3.4E-13 71.4 23.5 433 1-464 22-533 (533) 146 protein:vir:98444 Length: 434 99.1 4.8E-10 3E-13 71.7 23.1 371 27-438 1-434 (434) 147 protein:vir:104082 Length: 485 99.0 4.3E-10 2.7E-13 71.9 22.7 411 2-442 1-485 (485) 148 protein:vir:7768 Length: 484 # 99.0 1.8E-10 1.1E-13 74.0 20.0 404 7-449 1-484 (484) 149 protein:vir:99916 Length: 504 99.0 6.1E-09 3.8E-12 65.6 28.8 415 1-452 3-504 (504) 150 protein:vir:2341 Length: 488 # 99.0 5E-10 3.1E-13 71.6 21.4 410 3-436 1-488 (488) 151 protein:vir:2427 Length: 485 # 99.0 9.7E-10 6E-13 70.0 22.6 404 1-442 16-485 (485) 152 protein:vir:97900 Length: 639 99.0 5.9E-10 3.7E-13 71.2 20.5 502 1-518 7-614 (639) 153 protein:vir:107517 Length: 639 99.0 5.9E-10 3.7E-13 71.2 20.5 502 1-518 7-614 (639) 154 protein:vir:4898 Length: 502 # 99.0 1E-08 6.5E-12 64.3 29.3 415 1-450 36-502 (502) 155 protein:vir:4223 Length: 486 # 98.9 2E-09 1.2E-12 68.3 22.0 408 2-439 1-486 (486) 156 protein:vir:5961 Length: 503 # 98.9 1.5E-08 9.5E-12 63.4 28.6 414 1-449 14-503 (503) 157 protein:vir:96494 Length: 501 98.9 1.9E-08 1.2E-11 62.9 28.8 411 1-450 37-501 (501) 158 protein:vir:38 Length: 496 # N 98.9 1.8E-08 1.1E-11 63.1 25.2 392 1-431 15-496 (496) 159 protein:vir:105819 Length: 456 98.8 3.6E-08 2.2E-11 61.4 27.2 383 7-431 1-456 (456) 160 protein:vir:102602 Length: 456 98.8 3.6E-08 2.2E-11 61.4 27.2 383 7-431 1-456 (456) 161 protein:vir:2732 Length: 501 # 98.8 4.7E-08 2.9E-11 60.8 28.9 413 1-446 35-501 (501) 162 protein:vir:7987 Length: 456 # 98.8 8.3E-09 5.1E-12 64.9 20.8 388 1-431 12-456 (456) 163 protein:vir:99072 Length: 479 98.8 4.4E-08 2.7E-11 60.9 24.7 412 1-450 1-479 (479) 164 protein:vir:4782 Length: 522 # 98.8 5.4E-08 3.4E-11 60.4 27.2 405 1-438 17-522 (522) 165 protein:vir:94742 Length: 409 98.7 6.8E-08 4.2E-11 59.9 27.6 348 1-386 4-409 (409) 166 protein:vir:80959 Length: 499 98.7 8.6E-08 5.3E-11 59.3 24.7 392 1-433 15-499 (499) 167 protein:vir:2500 Length: 501 # 98.7 8.7E-08 5.4E-11 59.3 23.7 394 1-440 34-501 (501) 168 protein:vir:78537 Length: 480 98.7 1.3E-07 8.3E-11 58.3 27.3 403 14-451 1-480 (480) 169 protein:vir:8184 Length: 474 # 98.6 1.7E-07 1.1E-10 57.6 24.9 396 1-420 1-474 (474) 170 protein:vir:1587 Length: 508 # 98.6 2.2E-07 1.3E-10 57.1 25.9 392 1-431 17-508 (508) 171 protein:vir:78227 Length: 480 98.6 2.2E-07 1.3E-10 57.1 28.0 403 14-451 1-480 (480) 172 protein:vir:105889 Length: 474 98.6 2.7E-07 1.6E-10 56.6 24.4 391 1-439 23-474 (474) 173 protein:vir:94101 Length: 474 98.6 2.7E-07 1.6E-10 56.6 24.4 391 1-439 23-474 (474) 174 protein:vir:9306 Length: 511 # 98.6 2.8E-07 1.7E-10 56.5 27.3 414 1-446 48-511 (511) 175 protein:vir:9871 Length: 429 # 98.5 4.3E-07 2.7E-10 55.5 23.9 371 16-436 1-429 (429) 176 protein:vir:103951 Length: 511 98.5 4.9E-07 3E-10 55.2 27.7 414 1-446 48-511 (511) 177 protein:vir:79703 Length: 505 98.5 5.2E-07 3.3E-10 55.0 27.4 392 1-429 18-505 (505) 178 protein:vir:80680 Length: 441 98.5 5.5E-07 3.4E-10 54.9 25.3 373 9-448 1-441 (441) 179 protein:vir:9815 Length: 500 # 98.5 5.6E-07 3.5E-10 54.9 26.1 392 1-431 17-500 (500) 180 protein:vir:3028 Length: 500 # 98.5 5.6E-07 3.5E-10 54.9 26.1 392 1-431 17-500 (500) 181 protein:vir:95806 Length: 440 98.4 6.2E-07 3.8E-10 54.6 23.1 392 1-432 1-440 (440) 182 protein:vir:96240 Length: 511 98.4 6.3E-07 3.9E-10 54.6 27.7 414 1-446 48-511 (511) 183 protein:vir:9751 Length: 422 # 98.4 7.2E-07 4.5E-10 54.3 26.9 357 9-412 1-422 (422) 184 protein:vir:97171 Length: 512 98.4 7.9E-07 4.9E-10 54.0 27.8 413 1-446 48-512 (512) 185 protein:vir:103219 Length: 201 98.4 2.1E-08 1.3E-11 62.7 13.1 181 220-441 1-201 (201) 186 protein:vir:106639 Length: 481 98.4 1E-06 6.5E-10 53.4 28.6 398 1-438 28-481 (481) 187 protein:vir:79043 Length: 479 98.3 1.2E-06 7.2E-10 53.1 27.1 379 1-441 30-479 (479) 188 protein:vir:98883 Length: 517 98.3 1.3E-06 7.8E-10 52.9 23.7 404 1-431 16-517 (517) 189 protein:vir:1634 Length: 409 # 98.3 1.4E-06 8.8E-10 52.6 27.0 348 1-386 4-409 (409) 190 protein:vir:99781 Length: 511 98.3 1.7E-06 1.1E-09 52.2 26.6 415 1-446 48-511 (511) 191 protein:vir:96366 Length: 511 98.3 1.8E-06 1.1E-09 52.1 26.9 420 1-446 39-511 (511) 192 protein:vir:78805 Length: 511 98.3 1.8E-06 1.1E-09 52.1 26.9 420 1-446 39-511 (511) 193 protein:vir:78907 Length: 518 98.3 1.9E-06 1.2E-09 52.0 23.7 395 1-436 12-518 (518) 194 protein:vir:93747 Length: 472 98.2 2.1E-06 1.3E-09 51.8 30.2 391 1-439 14-472 (472) 195 protein:vir:9568 Length: 410 # 98.2 2.1E-06 1.3E-09 51.7 27.4 352 3-413 1-410 (410) 196 protein:vir:94805 Length: 492 98.2 2.2E-06 1.4E-09 51.6 29.9 390 1-439 52-492 (492) 197 protein:vir:3964 Length: 453 # 98.2 2.4E-06 1.5E-09 51.4 28.2 396 1-438 9-453 (453) 198 protein:vir:94546 Length: 506 98.2 2.6E-06 1.6E-09 51.2 26.7 407 1-447 22-506 (506) 199 protein:vir:97336 Length: 492 98.2 3.1E-06 1.9E-09 50.8 29.2 385 1-439 52-492 (492) 200 protein:vir:1236 Length: 483 # 98.2 3.2E-06 2E-09 50.7 29.1 393 1-439 25-483 (483) 201 protein:vir:99522 Length: 470 98.1 5.2E-06 3.2E-09 49.6 27.5 397 1-441 17-470 (470) 202 protein:vir:3609 Length: 452 # 98.0 6.4E-06 4E-09 49.1 27.9 390 1-441 9-452 (452) 203 protein:vir:95113 Length: 474 98.0 8.1E-06 5E-09 48.5 29.1 386 1-439 35-474 (474) 204 protein:vir:95899 Length: 474 97.8 1.7E-05 1E-08 46.8 27.9 372 1-446 58-474 (474) 205 protein:vir:96266 Length: 474 97.8 1.7E-05 1E-08 46.8 27.9 372 1-446 58-474 (474) 206 protein:vir:733 Length: 453 # 97.8 1.9E-05 1.2E-08 46.4 27.5 403 1-440 9-453 (453) 207 protein:vir:94498 Length: 474 97.7 3.1E-05 1.9E-08 45.3 29.2 391 1-439 21-474 (474) 208 protein:vir:97447 Length: 474 97.7 3.1E-05 1.9E-08 45.3 29.2 391 1-439 21-474 (474) 209 protein:vir:106571 Length: 499 97.6 4.6E-05 2.9E-08 44.3 28.5 405 1-464 9-499 (499) 210 protein:vir:96839 Length: 474 97.5 4.8E-05 3E-08 44.3 28.9 380 1-435 33-474 (474) 211 protein:vir:105461 Length: 470 97.5 4.9E-05 3.1E-08 44.2 27.0 373 1-433 30-470 (470) 212 protein:vir:105292 Length: 478 97.5 5.2E-05 3.2E-08 44.1 29.7 373 1-437 50-478 (478) 213 protein:vir:78083 Length: 537 97.5 6.1E-05 3.8E-08 43.7 33.0 418 1-447 15-537 (537) 214 protein:vir:96179 Length: 468 97.4 7.5E-05 4.6E-08 43.2 24.1 379 1-434 11-468 (468) 215 protein:vir:107112 Length: 478 97.3 9.8E-05 6.1E-08 42.6 28.0 391 1-441 15-478 (478) 216 protein:vir:4073 Length: 279 # 97.1 1.2E-05 7.4E-09 47.6 9.8 274 22-391 1-279 (279) 217 protein:vir:101494 Length: 527 96.5 0.00058 3.6E-07 38.3 26.2 411 1-442 1-527 (527) 218 protein:vir:102239 Length: 527 96.5 0.0006 3.7E-07 38.3 26.2 411 1-442 1-527 (527) 219 protein:vir:102950 Length: 471 95.9 0.0012 7.7E-07 36.5 27.7 377 1-441 30-471 (471) 220 protein:vir:9922 Length: 489 # 95.7 0.0017 1E-06 35.8 27.4 404 1-438 9-489 (489) 221 protein:vir:105154 Length: 525 95.4 0.0021 1.3E-06 35.2 18.3 411 1-453 52-525 (525) 222 protein:vir:94956 Length: 452 94.2 0.0051 3.1E-06 33.2 27.2 379 3-425 1-452 (452) 223 protein:vir:102330 Length: 451 93.6 0.0069 4.3E-06 32.4 24.4 366 1-431 26-451 (451) 224 protein:vir:106999 Length: 564 93.2 0.0082 5.1E-06 32.0 24.6 430 1-447 3-564 (564) 225 protein:vir:3361 Length: 535 # 93.2 0.0084 5.2E-06 32.0 14.2 400 1-485 42-535 (535) 226 protein:vir:1538 Length: 535 # 93.0 0.0093 5.8E-06 31.7 13.3 402 1-492 42-535 (535) 227 protein:vir:104892 Length: 558 92.9 0.0097 6E-06 31.6 22.9 439 1-458 3-558 (558) 228 protein:vir:97265 Length: 513 92.7 0.01 6.4E-06 31.5 28.6 408 1-448 8-513 (513) 229 protein:vir:94709 Length: 522 92.0 0.013 8.3E-06 30.9 14.3 397 1-483 40-522 (522) 230 protein:vir:80453 Length: 535 91.9 0.014 8.5E-06 30.8 31.7 412 3-434 1-535 (535) 231 protein:vir:103765 Length: 549 91.8 0.014 8.9E-06 30.7 14.4 409 1-483 40-549 (549) 232 protein:vir:7017 Length: 515 # 90.8 0.019 1.2E-05 30.0 17.5 390 1-479 43-515 (515) 233 protein:vir:98265 Length: 524 90.1 0.023 1.4E-05 29.6 23.6 405 1-433 27-524 (524) 234 protein:vir:101806 Length: 516 89.7 0.025 1.5E-05 29.4 23.1 405 1-433 5-516 (516) 235 protein:vir:101189 Length: 516 89.7 0.025 1.5E-05 29.4 23.1 405 1-433 5-516 (516) 236 protein:vir:103177 Length: 533 87.4 0.039 2.4E-05 28.3 23.8 418 1-449 3-533 (533) 237 protein:vir:102668 Length: 547 86.8 0.043 2.7E-05 28.1 19.6 390 1-445 34-547 (547) 238 protein:vir:108049 Length: 524 86.6 0.045 2.8E-05 28.0 20.7 407 1-433 9-524 (524) 239 protein:vir:104500 Length: 537 84.8 0.058 3.6E-05 27.4 25.0 427 1-440 4-537 (537) 240 protein:vir:78393 Length: 489 84.2 0.062 3.9E-05 27.2 28.2 397 1-433 1-489 (489) 241 protein:vir:103330 Length: 517 83.3 0.07 4.3E-05 26.9 21.8 374 1-439 40-517 (517) 242 protein:vir:95149 Length: 501 83.1 0.072 4.4E-05 26.9 28.0 404 1-437 1-501 (501) 243 protein:vir:7430 Length: 563 # 81.8 0.083 5.1E-05 26.5 24.3 420 1-444 1-563 (563) 244 protein:vir:96988 Length: 516 81.6 0.084 5.2E-05 26.5 15.7 386 1-468 44-516 (516) 245 protein:vir:100598 Length: 516 80.0 0.099 6.1E-05 26.1 23.5 405 1-433 5-516 (516) 246 protein:vir:80165 Length: 651 77.2 0.13 7.9E-05 25.5 24.3 442 1-517 24-651 (651) 247 protein:vir:106282 Length: 521 76.4 0.14 8.5E-05 25.3 24.8 405 1-433 7-521 (521) 248 protein:vir:95014 Length: 491 74.0 0.16 0.0001 24.9 24.9 396 1-441 1-491 (491) 249 protein:vir:81017 Length: 521 73.9 0.16 0.0001 24.9 23.1 406 1-433 10-521 (521) 250 protein:vir:78696 Length: 542 72.4 0.18 0.00011 24.6 22.7 384 1-442 33-542 (542) 251 protein:vir:6596 Length: 521 # 67.2 0.26 0.00016 23.8 24.2 406 1-433 22-521 (521) 252 protein:vir:99672 Length: 532 65.3 0.29 0.00018 23.6 17.3 381 1-467 42-532 (532) 253 protein:vir:6896 Length: 523 # 54.2 0.51 0.00032 22.2 20.4 407 1-433 7-523 (523) 254 protein:vir:5665 Length: 511 # 52.6 0.55 0.00034 22.0 22.4 403 1-426 1-511 (511) 255 protein:vir:100039 Length: 522 38.4 1.1 0.00066 20.4 18.1 408 1-467 9-522 (522) 256 protein:vir:97376 Length: 320 36.7 1.2 0.00072 20.2 13.0 310 1-395 2-320 (320) 257 protein:vir:96783 Length: 488 28.0 1.8 0.0011 19.2 25.4 376 1-409 14-488 (488) 258 protein:vir:10447 Length: 536 26.7 1.9 0.0012 19.0 23.2 406 1-512 41-536 (536) 259 protein:vir:101418 Length: 569 26.7 1.9 0.0012 19.0 17.5 412 1-434 41-569 (569) 260 protein:vir:7208 Length: 524 # 24.6 2.2 0.0013 18.7 22.9 406 1-433 1-524 (524) 261 protein:vir:103458 Length: 524 22.7 2.4 0.0015 18.5 22.9 406 1-433 1-524 (524) 262 protein:vir:8883 Length: 543 # 21.8 2.5 0.0016 18.4 21.3 394 1-468 42-543 (543) 263 protein:vir:94572 Length: 535 21.6 2.6 0.0016 18.3 25.5 374 1-424 43-535 (535) 264 protein:vir:1785 Length: 555 # 21.3 2.6 0.0016 18.3 24.0 386 1-449 33-555 (555) 265 protein:vir:2198 Length: 536 # 20.8 2.7 0.0017 18.2 24.1 406 1-512 41-536 (536) 266 protein:vir:80211 Length: 514 20.1 2.8 0.0018 18.1 16.2 392 1-478 31-514 (514) No 1 >protein:vir:7853 Length: 518 # NCBI annotation: gp10 # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:150 # MgeName: CJW1 # Cross-refs: genbank:acc:NP_817460;genbank:gi:29565889;genbank:GeneID:1259085 Probab=100.00 E-value=1.9e-136 Score=764.66 Aligned_cols=518 Identities=100% Similarity=1.462 Sum_probs=502.6 Q ss_pred CCCCCCCCCccccccccchhhhhhhccCccCCcccCccchhhHHHHhhhHHHHHHHHHHHHhhccCceEEEEecCCceee Q lcl|Aclame:pro 1 MLLANGQTLSAPAMAELSPQMQDSYYYAPAVGMQLERQFSLYGGIYKNQPWVRTVIAKRAQALARLPVKCMFTSGDTETE 80 (518) Q Consensus 1 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~v~~ia~~ia~lp~~v~~~~~~~~~~ 80 (518) ||+++++...+|+..++++|+.++|++.+..+..++..++++...|+++++|++||++||++||++||++|++++++..+ T Consensus 1 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~V~acV~~IA~~iA~lp~~l~~~~~~~~~~ 80 (518) T protein:vir:78 1 MLLANGQTLSAPAMAELSPQMQDSYYYAPAVGMQLERQFSLYGGIYKNQPWVRTVIAKRAQALARLPVKCMFTSGDTETE 80 (518) T ss_pred CcccCceeeccchhhhhhhhhhhcccccceeceecccccchhhHHhhhhHHHHHHHHHHHHhhccCceEEEEEcCCcccc Confidence 99999999999999999999999999999999999999999999999999999999999999999999999998888888 Q ss_pred ecchHHHHHhhccCccCCHHHHHHHHHHHHHHcCCeeEEeeeCCCCceeeeeeeCCcceEEEeccCcceEEEEeeccCCC Q lcl|Aclame:pro 81 EHDTGYAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQKNKSGTPEKLMPMHPSRVAIKRNSRTGRYEYYFQAGAGV 160 (518) Q Consensus 81 ~~~~~~~~l~~~PN~~~t~~~f~~~~~~~~ll~G~~~~~i~~~~~G~~~~l~~l~p~~v~~~~~~~~~~~~~~~~~~~~~ 160 (518) ..+++++.|+.+||++||+++||+.++.+++++||+|++++++..|++++|||++|.+|++..+.+++...|.|...... T Consensus 81 ~~~~~~~~Ll~~PN~~~t~~~F~~~lv~~lll~Gnay~~i~r~~~G~~~~L~~l~p~~Vtv~~~~~~~~~~y~~~~~~~~ 160 (518) T protein:vir:78 81 EHDTGYAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQKNKSGTPEKLMPMHPSRVAIKRNSRTGRYEYYFQAGAGV 160 (518) T ss_pred ccchHHHHHHhCCCCCCCHHHHHHHHHHHHhhcCCeEEEEEEcCCCcEEEEEEECCCceEEEEcCCCCEEEEEEEecCCc Confidence 88899999999999999999999999999999999999999999999999999999999999998888999998887777 Q ss_pred CceeEEEeeeeeEEeecCCCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHccCCcceeeeeCCcCCHHHHHHHHHHHH Q lcl|Aclame:pro 161 GTQLVSFADDEVVPIRFFNPDGLERGLSLMESLKSTIFSEDSSRNATAAMWKNAGRPNLVLRHEKRLSPEAQQRLREQFD 240 (518) Q Consensus 161 ~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~p~gil~~~~~~~~e~~~~~~~~~~ 240 (518) +++.+.|++++||||+++++++..+|+||+..+...|....++++++.++|+||++|+|||++++.+++++++++++.|+ T Consensus 161 ~~~~~~~~~~eIiHir~~~~dg~~~G~Spi~~~~~~i~~~~aa~~~~~~~f~Ng~~p~gvl~~~~~ls~e~~~~~k~~~~ 240 (518) T protein:vir:78 161 GTQLVSFADDEVVPIRFFNPDGLERGLSLMESLKSTIFSEDSSRNATAAMWKNAGRPNLVLRHEKRLSPEAQQRLREQFD 240 (518) T ss_pred cceeEEecCCcEEEecCCCCCcccccccHHHHHHHHHHHHHHHHHHHHHHHhcCCCccEEEecCCCCCHHHHHHHHHHHH Confidence 88889999999999999999998899999999999999999999999999999999999999999999999999999999 Q ss_pred HHhcCccccccceeccCCcccccccCChhhHHHHHHHHHHHHHHHHHhccchHhhccccccccccHHHHHHHHHHHHHHH Q lcl|Aclame:pro 241 RAHAGSSNTGKTMVVEEGMEPIPLQLTAVEMQFIEARQLNREEVCGVYDIAPPIVHILDRATFSNISAQMRAFYRDTMAI 320 (518) Q Consensus 241 ~~~~g~~n~g~~~vl~~g~~~~~~~~~~~d~q~~e~~~~~~~~Ia~~fgVpp~~lg~~~~~~~s~~e~~~~~~~~~~l~P 320 (518) +.++|..|+|+++||++|++|+++++++.|+||+|++++++++||++|||||++||+.++++++|++++.+.|+++||+| T Consensus 241 ~~~~G~~nag~~~vL~~G~~~~~l~~~~~d~q~le~r~~~~~eIa~afgVPp~~lg~~~~st~sn~e~~~~~f~~~tL~P 320 (518) T protein:vir:78 241 RAHAGSSNTGKTMVVEEGMEPIPLQLTAVEMQFIEARQLNREEVCGVYDIAPPIVHILDRATFSNISAQMRAFYRDTMAI 320 (518) T ss_pred HHhcCcccCCceeEcCCCceEEeccCChhHHHHHHHHHHHHHHHHHHhCCCHHHhccCCCCCchhHHHHHHHHHHHHHHH Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred HHHHHHHHHHhhhcchhhccceeeechhhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHHhCCCCCCccCceeeeccccc Q lcl|Aclame:pro 321 PIARIQSAMDKYVGQYWVRKNRMKFDIDDVIQPDWEAKSESTQKMVNSGVATPNEGREIMGLPRSDDPKADELYANSALQ 400 (518) Q Consensus 321 ~~~~ie~~ln~~l~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~T~NE~R~~~g~~pi~~~~gD~~~~~~n~~ 400 (518) |+.+||++||++|++..++.++++||++.++++|.+++++.+.+++++|+||+||+|+++|++|+++|+||+++++.|++ T Consensus 321 ~~~~ie~eln~~L~~~~~~~~~~~fd~~~Llr~D~~~r~~~~~~~~~~G~lT~NE~R~~~gl~pie~~~gD~~~v~~n~~ 400 (518) T protein:vir:78 321 PIARIQSAMDKYVGQYWVRKNRMKFDIDDVIQPDWEAKSESTQKMVNSGVATPNEGREIMGLPRSDDPKADELYANSALQ 400 (518) T ss_pred HHHHHHHHHHHhhcccccCcceEEeechhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCCceeeecccce Confidence 99999999999999988888999999999999999999999999999999999999999999999999999999999999 Q ss_pred ccccccccCCCCCCCCCCCCcccCCCCCccCCccccccccChhhhcchhHHHHHHHHHHhhccCcchhHHHHHHHHHHHh Q lcl|Aclame:pro 401 PLGATPDGAVEGEEAPAPKRPASTPVASLDQSPPASVPGLSPTNSDRSTDSGKTEPRRLMQKPPPKESSPKHLRAVKGAM 480 (518) Q Consensus 401 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~ 480 (518) |++...++...+++++.++++++++..+.+++++++.+..+++.+++..+++++++++.++||.++|++.||+++|++|| T Consensus 401 pl~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 480 (518) T protein:vir:78 401 PLGATPDGAVEGEEAPAPKRPASTPVASLDQSPPASVPGLSPTNSDRSTDSGKTEPRRLMQKPPPKESSPKHLRAVKGAM 480 (518) T ss_pred ecccccccccCCCCCCCCCCCCcccccccccCccccCCCCCcccccccccccccchhcccCCCCcccccchHHHHHHHHh Confidence 99999888888888888889999988888899999999999999999999999999999999999999999999999999 Q ss_pred hhhhhhcccccchhhhhhhHHHHHHHHHHHHhhhcccC Q lcl|Aclame:pro 481 GRGKDIKGFALQLAEKYPDDLEDILLAVQLALAERKDN 518 (518) Q Consensus 481 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 518 (518) |++|++++|++|.+|.|++||+||.+|++.||+++||| T Consensus 481 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 518 (518) T protein:vir:78 481 GRGKDIKGFALQLAEKYPDDLEDILLAVQLALAERKDN 518 (518) T ss_pred hcCCcchhhhhhhhhhcchhHHHHHHHHHHhhhhccCC Confidence 99999999999999999999999999999999999999 No 2 >protein:vir:101648 Length: 518 # NCBI annotation: gp11 # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:1515 # MgeName: 244 # Cross-refs: genbank:acc:YP_654766;genbank:gi:109302764;genbank:GeneID:4156082 Probab=100.00 E-value=7.2e-136 Score=761.47 Aligned_cols=518 Identities=99% Similarity=1.448 Sum_probs=502.2 Q ss_pred CCCCCCCCCccccccccchhhhhhhccCccCCcccCccchhhHHHHhhhHHHHHHHHHHHHhhccCceEEEEecCCceee Q lcl|Aclame:pro 1 MLLANGQTLSAPAMAELSPQMQDSYYYAPAVGMQLERQFSLYGGIYKNQPWVRTVIAKRAQALARLPVKCMFTSGDTETE 80 (518) Q Consensus 1 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~v~~ia~~ia~lp~~v~~~~~~~~~~ 80 (518) ||++.++..++|+..++++|+.+.|++.+..+..+....+++.++|+++++|++||++||++||+||+++|++++++..+ T Consensus 1 ~~~~~~~~~~~p~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~V~acV~~IA~~iA~lpl~l~~~~~~~~~~ 80 (518) T protein:vir:10 1 MLLANGQTLSAPAMAELSPQMQDSYYYAPAVGMQLERQFSLYGGIYKNQPWVRTVIAKRAQALARLPVKCMFTSGDTETE 80 (518) T ss_pred CcccCceeecCchhhhhhhhhhcccccccccceecccccchhhHHHhhhHHHHHHHHHHHHhhccCceEEEEEcCCCcee Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999888888 Q ss_pred ecchHHHHHhhccCccCCHHHHHHHHHHHHHHcCCeeEEeeeCCCCceeeeeeeCCcceEEEeccCcceEEEEeeccCCC Q lcl|Aclame:pro 81 EHDTGYAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQKNKSGTPEKLMPMHPSRVAIKRNSRTGRYEYYFQAGAGV 160 (518) Q Consensus 81 ~~~~~~~~l~~~PN~~~t~~~f~~~~~~~~ll~G~~~~~i~~~~~G~~~~l~~l~p~~v~~~~~~~~~~~~~~~~~~~~~ 160 (518) ..+|+++.|+.+||++||+++||+.++.+++++||+|++++++.+|++++|+|++|.+|++..+.+++...|.|...... T Consensus 81 ~~~~~~~~Ll~~PN~~~t~~~F~~~lv~~lll~Gnay~~i~r~~~G~~~~L~~l~p~~v~v~~~~~~~~~~y~~~~~~~~ 160 (518) T protein:vir:10 81 ESDTGYAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQKNKSGTPEKLMPMHPSRVAIKRNSRTGRYEYYFQAGAGV 160 (518) T ss_pred ccchHHHHHHcCCCCCCCHHHHHHHHHHHHhhcCCeEEEEEECCCCcEEEEEEECCCceEEEEcCCCCEEEEEEEecCCc Confidence 88999999999999999999999999999999999999999999999999999999999999998888899998887777 Q ss_pred CceeEEEeeeeeEEeecCCCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHccCCcceeeeeCCcCCHHHHHHHHHHHH Q lcl|Aclame:pro 161 GTQLVSFADDEVVPIRFFNPDGLERGLSLMESLKSTIFSEDSSRNATAAMWKNAGRPNLVLRHEKRLSPEAQQRLREQFD 240 (518) Q Consensus 161 ~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~p~gil~~~~~~~~e~~~~~~~~~~ 240 (518) +++.+.|++++|||||++++++..+|+||+..+...|....++++++.++|+||++|+|||++++.+++++.+++++.|+ T Consensus 161 ~~~~~~~~~~eViHir~~s~dg~~~G~spi~~a~~~i~~~~a~~~~~~~~f~ng~~p~gil~~~~~ls~e~~~~~k~~~~ 240 (518) T protein:vir:10 161 GTQLVSFADDEVVPIRFFNPDGLERGLSLMESLKSTIFSEDSSRNATAAMWKNAGRPNLVLRHEKRLSEAAQQRLREQFD 240 (518) T ss_pred cceEEEecCCcEEEecCCCCCcccccccHHHHHHHHHHHHHHHHHHHHHHHhcCCCccEEEecCCCCCHHHHHHHHHHHH Confidence 78889999999999999999998899999999999999999999999999999999999999999999999999999999 Q ss_pred HHhcCccccccceeccCCcccccccCChhhHHHHHHHHHHHHHHHHHhccchHhhccccccccccHHHHHHHHHHHHHHH Q lcl|Aclame:pro 241 RAHAGSSNTGKTMVVEEGMEPIPLQLTAVEMQFIEARQLNREEVCGVYDIAPPIVHILDRATFSNISAQMRAFYRDTMAI 320 (518) Q Consensus 241 ~~~~g~~n~g~~~vl~~g~~~~~~~~~~~d~q~~e~~~~~~~~Ia~~fgVpp~~lg~~~~~~~s~~e~~~~~~~~~~l~P 320 (518) +.++|..|+|+++||++|++|+++++++.|+||+|++++++++||++|||||++||+.++++++|+|++.+.|+++||+| T Consensus 241 ~~~~G~~nag~v~vL~~G~~~~~l~~s~~D~q~le~r~~~~~eIa~afgVPp~~lg~~~~~t~sn~eq~~~~f~~~tL~P 320 (518) T protein:vir:10 241 RAHSGSSNTGKTMVVEEGMEPIPLQLTAVEMQFIEARQLNREEVCGVYDIAPPIVHILDRATFSNISAQMRAFYRDTMAI 320 (518) T ss_pred HHhcCccccCcceEcCCCceEEEccCChhHHHHHHHHHHHHHHHHHHhCCCHHHhccCCCCCchhHHHHHHHHHHHHHHH Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred HHHHHHHHHHhhhcchhhccceeeechhhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHHhCCCCCCccCceeeeccccc Q lcl|Aclame:pro 321 PIARIQSAMDKYVGQYWVRKNRMKFDIDDVIQPDWEAKSESTQKMVNSGVATPNEGREIMGLPRSDDPKADELYANSALQ 400 (518) Q Consensus 321 ~~~~ie~~ln~~l~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~T~NE~R~~~g~~pi~~~~gD~~~~~~n~~ 400 (518) |+.+||++||++|++..++.++++||++.++++|.+++++.+++++++|++|+||+|+++|++|+++|+||+++++.|++ T Consensus 321 ~l~~ie~~ln~~L~~~~~~~~~~~fd~~~llr~D~~~r~~~~~~~~~~G~lT~NE~R~~~Gl~pie~~~gD~~~~~~n~~ 400 (518) T protein:vir:10 321 PIARIQSAMDKYVGQYWVRKNRMKFDIDDVIQPDWEAKSESTQKMVNSGVATPNEGREIMGLPRSDDPKADELYANSALQ 400 (518) T ss_pred HHHHHHHHHHHhhcccccCCceEEEechhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCCCeeeecccce Confidence 99999999999999988888999999999999999999999999999999999999999999999999999999999999 Q ss_pred ccccccccCCCCCCCCCCCCcccCCCCCccCCccccccccChhhhcchhHHHHHHHHHHhhccCcchhHHHHHHHHHHHh Q lcl|Aclame:pro 401 PLGATPDGAVEGEEAPAPKRPASTPVASLDQSPPASVPGLSPTNSDRSTDSGKTEPRRLMQKPPPKESSPKHLRAVKGAM 480 (518) Q Consensus 401 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~ 480 (518) |++...++...+++++.++++++++..+.+++++++.+..+++.++++.+++++++++.+.||.++|++.||+++|++|| T Consensus 401 pl~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 480 (518) T protein:vir:10 401 PLGATPDGAVEGEEAPAPKRPASTPVASLDQSPPTSVPGLSPTNSDRSTDSGKTEPRRLMQKPPPKESSPKHLRAVKGAM 480 (518) T ss_pred ecccccccccCCCCCCCCCCCCccccccccccccccCCCCCcccccccccccccchhccccCCCcccccchHHHHHHHHh Confidence 99999888888888888889988888888899999999999999999999999999999999999999999999999999 Q ss_pred hhhhhhcccccchhhhhhhHHHHHHHHHHHHhhhcccC Q lcl|Aclame:pro 481 GRGKDIKGFALQLAEKYPDDLEDILLAVQLALAERKDN 518 (518) Q Consensus 481 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 518 (518) |++|++++|++|.+|.|++||+||.+|++.||+++||| T Consensus 481 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 518 (518) T protein:vir:10 481 GRGKDIKGFALQLAEKYPDDLEDILLAVQLALAERKDN 518 (518) T ss_pred hcCccchhHhhhhhhhcchhHHHHHHHHHHhhhhccCC Confidence 99999999999999999999999999999999999999 No 3 >protein:vir:93610 Length: 454 # NCBI annotation: putative portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:157 # MgeName: phi 4795 # Cross-refs: genbank:acc:YP_001449295;genbank:gi:157166043;interpro:IPR006427;interpro:IPR006944;uniprot:Q6H9U6;genbank:GeneID:5580432 Probab=100.00 E-value=8.2e-100 Score=563.82 Aligned_cols=443 Identities=19% Similarity=0.230 Sum_probs=366.0 Q ss_pred CCCCCCCCCccccccc-------cchhhhhhhccCccCCcccCccchhhHHHHhhhHHHHHHHHHHHHhhccCceEEEEe Q lcl|Aclame:pro 1 MLLANGQTLSAPAMAE-------LSPQMQDSYYYAPAVGMQLERQFSLYGGIYKNQPWVRTVIAKRAQALARLPVKCMFT 73 (518) Q Consensus 1 ~~f~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~v~~ia~~ia~lp~~v~~~ 73 (518) =+|.+++....+.... ...++.+.|++.+..|+ .++.+.++++++|++||++||++||+|||++|++ T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~------~v~~~~al~~~~V~~~v~~Ia~~iA~lp~~~~~~ 76 (454) T protein:vir:93 3 NLLRRTRKNQKSGRDVREAGWTSLFQAVAEPFAGAWQQGV------KADPEAVLSFHAVFACISLISQDIAKMRLRLMQT 76 (454) T ss_pred CccccCcccccccccccchhhhhhhhhhhhhhcchhhcCc------ccChHHhhccHHHHHHHHHHHHhhccCceEEEEe Confidence 2333322222211111 12233334444444444 3455678999999999999999999999999998 Q ss_pred cCCce-eeecchHHHHHhhccCccCCHHHHHHHHHHHHHHcCCeeEEeeeCCCCceeeeeeeCCcceEEEeccCcceEEE Q lcl|Aclame:pro 74 SGDTE-TEEHDTGYAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQKNKSGTPEKLMPMHPSRVAIKRNSRTGRYEY 152 (518) Q Consensus 74 ~~~~~-~~~~~~~~~~l~~~PN~~~t~~~f~~~~~~~~ll~G~~~~~i~~~~~G~~~~l~~l~p~~v~~~~~~~~~~~~~ 152 (518) ++++. .+..+|++++|+.+||++||+++||+.++.+++++||+|++++++.+|++++|||++|.+|++..+.++ .+.| T Consensus 77 ~~~g~~~~~~~~~~~~L~~~PN~~~t~~~f~~~l~~~lll~Gna~~~i~r~~~G~~~~L~~i~~~~v~v~~~~~g-~~~y 155 (454) T protein:vir:93 77 DAQGIRRETRRGDIARLCRRPNAQQNRIQFFELWLNAKLRHGNTVVLKIRNARGQIKELRILDWNRVEPLVADDG-EVFY 155 (454) T ss_pred ccCCccchhhhHHHHHHHhcCCCCCCHHHHHHHHHHHHhhcCceEEEEEECCCCcEEEEEEEcCcceEEEEcCCC-cEEE Confidence 77664 456788899999999999999999999999999999999999999999999999999999999987665 4556 Q ss_pred EeeccCC-CCceeEEEeeeeeEEeecCCCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHccCCcceeeeeCCcCCHHH Q lcl|Aclame:pro 153 YFQAGAG-VGTQLVSFADDEVVPIRFFNPDGLERGLSLMESLKSTIFSEDSSRNATAAMWKNAGRPNLVLRHEKRLSPEA 231 (518) Q Consensus 153 ~~~~~~~-~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~p~gil~~~~~~~~e~ 231 (518) .+..... ..+..+.|++++||||++....+.++|+||+..+...+....+++++..++|+||++|+|+|++++.+++++ T Consensus 156 ~~~~~~~~~~~~~~~~~~~eViH~k~~~~~~~~~G~sp~~~~~~~i~~~~~~~~~~~~~f~ng~~p~gil~~~~~l~~e~ 235 (454) T protein:vir:93 156 RITPDRNCGITEAVTVPAREVIHDRFNCFFHPLIGLPPVYAAGLAATQGHHIQENSTSFFRNGGRPSGVIEIPGSITEEN 235 (454) T ss_pred EEEeccccccceeEEecCcceEEeccCCCCCCceeccHHHHHHHHHHHHHHHHHHHHHHHhccCCccEEEecCCCCCHHH Confidence 6654432 234567899999999998766667899999999999999999999999999999999999999999999999 Q ss_pred HHHHHHHHHHHhcCccccccceeccCCcccccccCChhhHHHHHHHHHHHHHHHHHhccchHhhccccccccccHHHHHH Q lcl|Aclame:pro 232 QQRLREQFDRAHAGSSNTGKTMVVEEGMEPIPLQLTAVEMQFIEARQLNREEVCGVYDIAPPIVHILDRATFSNISAQMR 311 (518) Q Consensus 232 ~~~~~~~~~~~~~g~~n~g~~~vl~~g~~~~~~~~~~~d~q~~e~~~~~~~~Ia~~fgVpp~~lg~~~~~~~s~~e~~~~ 311 (518) .+++++.|++.++| .|+|+++|+++|++|++++.++.|+||+|++++++++||++|||||++||++++++++|++++.+ T Consensus 236 ~~~~~~~~~~~~~g-~n~g~~~vl~~g~~~~~l~~~~~d~q~le~~~~~~~~Ia~~fgVPp~~lg~~~~~t~sn~e~~~~ 314 (454) T protein:vir:93 236 AKKLKSNWDSGYTG-ENAGKTAILSNGAKYNPTTFSPVDSQTVEQLKMTAEIVCSVFRVPAYKIGVGQPPSSDNVEALEQ 314 (454) T ss_pred HHHHHHHHHHHhcc-cccCCceeccCCceEEEcccChhHHHHHHHHHHHHHHHHHHhCCCHHHcCCCCCCcchhHHHHHH Confidence 99999999999988 78999999999999999999999999999999999999999999999999999999999999999 Q ss_pred HHHHHHHHHHHHHHHHHHHhhhcchhhccceeeechhhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHHhCCCCCCccCc Q lcl|Aclame:pro 312 AFYRDTMAIPIARIQSAMDKYVGQYWVRKNRMKFDIDDVIQPDWEAKSESTQKMVNSGVATPNEGREIMGLPRSDDPKAD 391 (518) Q Consensus 312 ~~~~~~l~P~~~~ie~~ln~~l~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~T~NE~R~~~g~~pi~~~~gD 391 (518) .|+++||.||+..||++||++|++.. .++++||++.++++|.+++++.+.+++++|+||+||+|+++|++|++ ||| T Consensus 315 ~f~~~~l~P~~~~ie~~ln~~L~~~~--~~~~~f~~~~ll~~D~~~r~~~~~~~~~~G~~T~NE~R~~~gl~pi~--ggD 390 (454) T protein:vir:93 315 QYYSQCLQTLIESIELLLDEALETGE--NESTEFDVTTLLRMDSERRMKTLGDAVKNTLLTPNEARKRENLPPLA--GGD 390 (454) T ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCC--CcEEEeechhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCC--CCC Confidence 99999999999999999999998753 46799999999999999999999999999999999999999999996 899 Q ss_pred eeeecccccccccccccCCCCCCCCCCCCcccCCCCCccCCccccccccChhhhcchhHHHHHHHHHHhhc Q lcl|Aclame:pro 392 ELYANSALQPLGATPDGAVEGEEAPAPKRPASTPVASLDQSPPASVPGLSPTNSDRSTDSGKTEPRRLMQK 462 (518) Q Consensus 392 ~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k 462 (518) +++++.++++++...+.....++....+++.+++......+.+....+.+ .+...+...+.+.| T Consensus 391 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~e~~-------~d~~~~~~~~~~~~ 454 (454) T protein:vir:93 391 ALYLQQQNYSLEALSRRDAREDPFASSGKTASVPQAVAASDGNKAITETE-------HDAVKAMFRGILKK 454 (454) T ss_pred eeeeccCccchHhhhccCcccCCCCCCccCCCCCCCCCCCCCCCCccCCc-------cchhhhhhhhhhcC Confidence 99999999999887766655554444455554443333333333222222 34444444555555 No 4 >protein:vir:6240 Length: 457 # NCBI annotation: gp34 # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:131 # MgeName: phi-BT1 # Cross-refs: genbank:acc:NP_813694;swissprot:trembl:q859c3;genbank:gi:29366754;interpro:IPR006427;interpro:IPR006944;uniprot:Q859C3;genbank:GeneID:1258894 Probab=100.00 E-value=2.3e-97 Score=550.36 Aligned_cols=441 Identities=17% Similarity=0.198 Sum_probs=351.2 Q ss_pred CCCCCCCCCccccc--cccchhhhh--hhccCccCCcccCccchhhHHHHhhhHHHHHHHHHHHHhhccCceEEEEecCC Q lcl|Aclame:pro 1 MLLANGQTLSAPAM--AELSPQMQD--SYYYAPAVGMQLERQFSLYGGIYKNQPWVRTVIAKRAQALARLPVKCMFTSGD 76 (518) Q Consensus 1 ~~f~~~~~~~~~~~--~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~v~~ia~~ia~lp~~v~~~~~~ 76 (518) -+|+++........ ...+++... .+++....| ..++.+.++++++|++||++||++||++|+++|+++++ T Consensus 6 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g------~~v~~~~al~~~~v~~~i~~ia~~iA~lp~~~~~~~~~ 79 (457) T protein:vir:62 6 ALFGRGHSPALDAAEGRAWEPYDPSIYNLGATASSG------ERVTPHDALQVSAVFASVRLLSETIATLPLSTYSKRGG 79 (457) T ss_pred hhhccccccccccccccccccchhhhhhccccccCC------ceechHHhhccHHHHHHHHHHHHhHhhCceEEEEecCC Confidence 56777554432211 112222111 122222222 33455778999999999999999999999999998877 Q ss_pred ceeeecchHHHHHhhccCccCCHHHHHHHHHHHHHHcCCeeEEeeeCCCCceeeeeeeCCcceEEEeccCcc---eEEEE Q lcl|Aclame:pro 77 TETEEHDTGYAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQKNKSGTPEKLMPMHPSRVAIKRNSRTG---RYEYY 153 (518) Q Consensus 77 ~~~~~~~~~~~~l~~~PN~~~t~~~f~~~~~~~~ll~G~~~~~i~~~~~G~~~~l~~l~p~~v~~~~~~~~~---~~~~~ 153 (518) +.++.+++.+..|+.+||++||+++||+.++.+++++||+|++|+++ .|++.+|+|++|.+|++..+...+ ..+|. T Consensus 80 ~~~~~~~~~~~~ll~~pn~~~t~~~f~~~~~~~l~l~Gna~~~i~~~-~g~~~~l~~l~p~~v~v~~~~~~~~~~~~~~~ 158 (457) T protein:vir:62 80 TRKEIDTPEWLDFPNAEPGGMGRIDILSQTVLSLLLQGNAFLAVRWA-GPNIAGLDVLDPTKIHVHMVMVDGLRRKVFEA 158 (457) T ss_pred ccccccchHHHHhccccCCCCCHHHHHHHHHHHHhhcCCeEEEEEeC-CCcEEEEEEEcCcceEEEEeccCCccceeEEE Confidence 77788899999999999999999999999999999999999998655 689999999999999987765433 33333 Q ss_pred eeccCC-CCceeEEEeeeeeEEeecCCCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHccCCcceeeeeCCcCCHHHH Q lcl|Aclame:pro 154 FQAGAG-VGTQLVSFADDEVVPIRFFNPDGLERGLSLMESLKSTIFSEDSSRNATAAMWKNAGRPNLVLRHEKRLSPEAQ 232 (518) Q Consensus 154 ~~~~~~-~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~p~gil~~~~~~~~e~~ 232 (518) |.+... .......|++++||||+++++++.++|+||+..+...|....++++++.++|+||++|+|||++++.++++++ T Consensus 159 y~~~~~g~~~~~~~~~~~eiih~r~~~~~~~~~G~sp~~~~~~~i~~~~~~~~~~~~~f~ng~~p~gil~~~~~ls~e~~ 238 (457) T protein:vir:62 159 YDIDADGNEVLLGWFTPRDVLHIPGMMLPGDFVGCSPISYARESIGLALAAQKYGAHFFRNGAMPGAVVEVPGTMSEEGL 238 (457) T ss_pred EEEccCCceeEEEeeCccceEEecCCCCCCceecccHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEcCCCCCHHHH Confidence 433222 2223456899999999999999888999999999999999999999999999999999999999999999999 Q ss_pred HHHHHHHHHHhcCccccccceeccCCcccccccCChhhHHHHHHHHHHHHHHHHHhccchHhhcccccccc--ccHHHHH Q lcl|Aclame:pro 233 QRLREQFDRAHAGSSNTGKTMVVEEGMEPIPLQLTAVEMQFIEARQLNREEVCGVYDIAPPIVHILDRATF--SNISAQM 310 (518) Q Consensus 233 ~~~~~~~~~~~~g~~n~g~~~vl~~g~~~~~~~~~~~d~q~~e~~~~~~~~Ia~~fgVpp~~lg~~~~~~~--s~~e~~~ 310 (518) +++++.|++.++|.+|+|+++||++|++|+++++++.|+||+|++++++++||++|||||++||+.+.+++ +|+|++. T Consensus 239 ~~~~~~~~~~~~G~~nag~~~vl~~g~~~~~l~~~~~d~q~~e~~~~~~~~Ia~~fgVPp~~lg~~~~~~~~~sn~eq~~ 318 (457) T protein:vir:62 239 ARAREAWRAANSGVDNAHRVALLTEGAKFSKVAMSPDEAQFLQTRQFQVPEIARIFGVPPHLISDATNSTSWGSGLAEQN 318 (457) T ss_pred HHHHHHHHHHhcCccccCcceecCCCceEEEccCChhHHHHHHHHHHHHHHHHHHhCCCHHHcCCCCCcccccchHHHHH Confidence 99999999999999999999999999999999999999999999999999999999999999999877664 8899999 Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhcchhhc-cceeeechhhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHHhCCCCCCcc Q lcl|Aclame:pro 311 RAFYRDTMAIPIARIQSAMDKYVGQYWVR-KNRMKFDIDDVIQPDWEAKSESTQKMVNSGVATPNEGREIMGLPRSDDPK 389 (518) Q Consensus 311 ~~~~~~~l~P~~~~ie~~ln~~l~~~~~~-~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~T~NE~R~~~g~~pi~~~~ 389 (518) +.|+++||.||+++||++||++|++..++ .++++||++.++++|.+++++.+++++++|+||+||+|+++||||+++++ T Consensus 319 ~~f~~~~l~P~~~~ie~~ln~~L~~~~~~~~~~i~fd~~~l~~~d~~~r~~~~~~~~~~G~~T~NE~R~~~gl~pi~~g~ 398 (457) T protein:vir:62 319 IAFTMFSLRPWLERIEAGFNRLLFAETADRFRFVKFNLDEIKRGAPKERMELWSLGLQNGIYSIDEVRAAEDMTPLPDGL 398 (457) T ss_pred HHHHHHHHHHHHHHHHHHHHhhhcCccccCceEEEeechhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCC Confidence 99999999999999999999999987654 46789999999999999999999999999999999999999999999878 Q ss_pred CceeeecccccccccccccCCCCCCCCCCCCcccCCCCCccCCccccccccChhhhcchh Q lcl|Aclame:pro 390 ADELYANSALQPLGATPDGAVEGEEAPAPKRPASTPVASLDQSPPASVPGLSPTNSDRST 449 (518) Q Consensus 390 gD~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 449 (518) ||++++|+|+++++...+......+. ....+.+++..+.+.+.....+++...+++... T Consensus 399 ~D~~~~~~n~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 457 (457) T protein:vir:62 399 GEKYRVPLNLGEIGEEPEPEPAPAPP-AIDPPAEEPADDEEPDNAEGDPDEGETEDDDDA 457 (457) T ss_pred cceeeeccccccccccccccccCCCc-cCCCCccCCCCCCCCCCCCCCCccccccccccC Confidence 89999999999988765443322111 111111111111111111111111111111100 No 5 >protein:vir:102118 Length: 409 # NCBI annotation: phage portal protein, HK97 family # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:1641 # MgeName: phiSM101 # Cross-refs: genbank:acc:YP_699943;genbank:gi:110804051;genbank:GeneID:4206661 Probab=100.00 E-value=5.4e-97 Score=548.37 Aligned_cols=402 Identities=23% Similarity=0.318 Sum_probs=351.9 Q ss_pred CCCCCCCCCccccccccchhhhhhhccCccCCcccCccchhhHHHHhhhHHHHHHHHHHHHhhccCceEEEEecCCceee Q lcl|Aclame:pro 1 MLLANGQTLSAPAMAELSPQMQDSYYYAPAVGMQLERQFSLYGGIYKNQPWVRTVIAKRAQALARLPVKCMFTSGDTETE 80 (518) Q Consensus 1 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~v~~ia~~ia~lp~~v~~~~~~~~~~ 80 (518) |+|.+.......+....++.+..+++.. ..+. .+..+.++++++|++||++||++||++||+|+++++++.+. T Consensus 1 m~f~~~~~~~~~~~~~~~~~~~~~~g~~-~~~~------~v~~~~al~~~~v~~~i~~ia~~ia~lp~~~~~~~~~~~~~ 73 (409) T protein:vir:10 1 MLFRKGFKNQSQEISIDDKKILEWLGIN-PSET------YVNGKSCLKQATVFGCIRILSDNISKLPIKIYQKKDGIKRV 73 (409) T ss_pred CcccccccCcCCCCCCChHHHHHHhcCC-cCcc------eechhhhhccHHHHHHHHHHHHhhhhCceEEEEecCCeeec Confidence 8888877666665555555455544432 2222 33456788999999999999999999999999987666666 Q ss_pred ecchHHHHHhhccCccCCHHHHHHHHHHHHHHcCCeeEEeeeCCCCceeeeeeeCCcceEEEeccCcc-----eEEEEee Q lcl|Aclame:pro 81 EHDTGYAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQKNKSGTPEKLMPMHPSRVAIKRNSRTG-----RYEYYFQ 155 (518) Q Consensus 81 ~~~~~~~~l~~~PN~~~t~~~f~~~~~~~~ll~G~~~~~i~~~~~G~~~~l~~l~p~~v~~~~~~~~~-----~~~~~~~ 155 (518) .+|+.+++|+.+||++||+++||+.++.+++++||+|++++++..|++++|||++|.+|++..+.++. .+.|.+. T Consensus 74 ~~~~l~~lL~~~PN~~~t~~~f~~~~~~~lll~Gna~~~i~r~~~G~~~~L~~i~~~~V~v~~~~~~~~~~~~~~~y~~~ 153 (409) T protein:vir:10 74 PDHYLEYLLKLRPNPYMSSSDFWKCIEVQRNIYGNAYVALDFKKNGEIKGLYPLKSDGMKIFVDDTGLLNSENNVWYLYT 153 (409) T ss_pred cCchHHHHHhhccCCCCCHHHHHHHHHHHHhhcCCeEEEEEEcCCCcEEEEEEEcCCceEEEEcCCccccccceEEEEEE Confidence 66677777888999999999999999999999999999999999999999999999999998876542 3344443 Q ss_pred ccCCCCceeEEEeeeeeEEeecCCCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHccCCcceeeeeCCcCCHHHHHHH Q lcl|Aclame:pro 156 AGAGVGTQLVSFADDEVVPIRFFNPDGLERGLSLMESLKSTIFSEDSSRNATAAMWKNAGRPNLVLRHEKRLSPEAQQRL 235 (518) Q Consensus 156 ~~~~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~p~gil~~~~~~~~e~~~~~ 235 (518) . ..+..+.|++++|||++++++++ ++|+||+..+..++....++++++.++|+||++|+|||++++.+++++.+++ T Consensus 154 ~---~~g~~~~~~~~evih~r~~~~d~-~~G~s~i~~~~~~i~~~~~~~~~~~~~f~ng~~~~gil~~~~~l~~e~~~~~ 229 (409) T protein:vir:10 154 D---DLGQRHKFMSDEILHFKGLTADG-LAGLSVIELLNHLIENGKSSETYLNNFFKNGLQVKGLVQYAGDLNPEAEEVF 229 (409) T ss_pred e---CCceeEEeccccEEEecCcCCCC-cccccHHHHHHHHHHHHHHHHHHHHHHHhccCCCcEEEEcCCCCCHHHHHHH Confidence 2 34566789999999999998876 6899999999999999999999999999999999999999999999999999 Q ss_pred HHHHHHHhcCccccccceeccCCcccccccCChhhHHHHHHHHHHHHHHHHHhccchHhhccccccccccHHHHHHHHHH Q lcl|Aclame:pro 236 REQFDRAHAGSSNTGKTMVVEEGMEPIPLQLTAVEMQFIEARQLNREEVCGVYDIAPPIVHILDRATFSNISAQMRAFYR 315 (518) Q Consensus 236 ~~~~~~~~~g~~n~g~~~vl~~g~~~~~~~~~~~d~q~~e~~~~~~~~Ia~~fgVpp~~lg~~~~~~~s~~e~~~~~~~~ 315 (518) ++.|++.+.|.+|+|+++|+++|++|++++.++.|+||+|++++++++||++|||||.++|+.++++++|.+++.+.|++ T Consensus 230 ~~~~~~~~~g~~n~~~~~vl~~g~~~~~l~~~~~d~q~~e~~~~~~~~Ia~~fgVPp~~lg~~~~~~~~~~e~~~~~f~~ 309 (409) T protein:vir:10 230 KENFERMSSGLKNAHRIAMLPIGYKFEPISQKLVDAQFLENSQLTIRQIASVFGVKMHQLNDLDRATHSNITEQNREFYI 309 (409) T ss_pred HHHHHHHhccccccCCceecCCCceEEEccCChhhHHHHHHHHHHHHHHHHHhCCCHHHcCCCCCCccccHHHHHHHHHH Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred HHHHHHHHHHHHHHHhhhcchhh--ccceeeechhhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHHhCCCCCCccCcee Q lcl|Aclame:pro 316 DTMAIPIARIQSAMDKYVGQYWV--RKNRMKFDIDDVIQPDWEAKSESTQKMVNSGVATPNEGREIMGLPRSDDPKADEL 393 (518) Q Consensus 316 ~~l~P~~~~ie~~ln~~l~~~~~--~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~T~NE~R~~~g~~pi~~~~gD~~ 393 (518) +||+||+++||++||++|++..+ .+++++||++.+++.|.+++++.+.+++++|++|+||+|+++|+||++ |||++ T Consensus 310 ~~l~P~~~~ie~~ln~kL~~~~~~~~~~~~~fd~~~ll~~d~~~~~~~~~~~~~~G~~T~NE~R~~lgl~p~~--ggD~~ 387 (409) T protein:vir:10 310 DTLQSILNMYELEINYKLFLISEIKNGFYSKFNVDTILRADIKTRYESYKEAIQNGFKTPNEIRELEEDEPLE--GGDVL 387 (409) T ss_pred HHHHHHHHHHHHHHHHhhcCchhccCCcEEEEechhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCC--CcCee Confidence 99999999999999999987544 457899999999999999999999999999999999999999999996 89999 Q ss_pred eecccccccccccccCCCCCCC Q lcl|Aclame:pro 394 YANSALQPLGATPDGAVEGEEA 415 (518) Q Consensus 394 ~~~~n~~~~~~~~~~~~~~~~~ 415 (518) ++|+|++|++..+++...+... T Consensus 388 ~~~~n~~~~~~~~~~~~kgGe~ 409 (409) T protein:vir:10 388 LINGNMIPVKMAGEQYSKGGEK 409 (409) T ss_pred eeccCccchhhccccccccCCC Confidence 9999999987765432222111 No 6 >protein:vir:100249 Length: 431 # NCBI annotation: gp78 # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:1619 # MgeName: Bcep176 # Cross-refs: genbank:acc:YP_355414;genbank:gi:77864704;genbank:GeneID:3725971 Probab=100.00 E-value=2.8e-96 Score=544.43 Aligned_cols=399 Identities=20% Similarity=0.246 Sum_probs=335.8 Q ss_pred CCCCCCCCCcccc----------ccccchh------------hhhhhccCccCCcccCccchhhHHHHhhhHHHHHHHHH Q lcl|Aclame:pro 1 MLLANGQTLSAPA----------MAELSPQ------------MQDSYYYAPAVGMQLERQFSLYGGIYKNQPWVRTVIAK 58 (518) Q Consensus 1 ~~f~~~~~~~~~~----------~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~v~~ 58 (518) .+++++. +.+.+ .+....| +....+.....| ..+....++++++|++||++ T Consensus 6 ~~r~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g------~~v~~~~al~~~~V~~ci~~ 78 (431) T protein:vir:10 6 FIRREKQ-PEAQARPHVEPSFQASTPTTSIPGETFEGLDDPRLKEYIRRGELNG------GTGRETRALRNMAVLRCVTL 78 (431) T ss_pred hhhcCcc-cccccccccccccccccccccccccccccccchHHHHhhccCccCc------ceechhhhhccHHHHHHHHH Confidence 2222222 11111 0111111 111112212222 23445678899999999999 Q ss_pred HHHhhccCceEEEEecCCceeeecchHHHHHhhccCccCCHHHHHHHHHHHHHHcCCeeEEeeeCCCCceeeeeeeCCcc Q lcl|Aclame:pro 59 RAQALARLPVKCMFTSGDTETEEHDTGYAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQKNKSGTPEKLMPMHPSR 138 (518) Q Consensus 59 ia~~ia~lp~~v~~~~~~~~~~~~~~~~~~l~~~PN~~~t~~~f~~~~~~~~ll~G~~~~~i~~~~~G~~~~l~~l~p~~ 138 (518) ||++||++|++|+++++++....+|+.+++|+.+||++||+++||+.++.+++++||+|++|+++ .|++++|+|++|.+ T Consensus 79 Ia~~iA~lp~~v~~~~~~~~~~~~~~~~~lL~~~PN~~~t~~~f~~~l~~~lll~Gna~~~i~r~-~g~~~~L~pl~~~~ 157 (431) T protein:vir:10 79 ISGTIGMLPMNLISSDDSKQVLTDDPAHRLLKYKPNDWQTPMEFKSLMQLRALLDGESMARIVWS-GNRPIRLIPMDRGS 157 (431) T ss_pred HHHhhccCceEEEEecCceeeeccchHHHHHhhccCCCCCHHHHHHHHHHHHhhcCCeEEEEEEc-CCceEEEEEEcCce Confidence 99999999999999877766667777788888899999999999999999999999999999998 48899999999999 Q ss_pred eEEEeccCcceEEEEeeccCCCCceeEEEeeeeeEEeecCCCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHccCCcc Q lcl|Aclame:pro 139 VAIKRNSRTGRYEYYFQAGAGVGTQLVSFADDEVVPIRFFNPDGLERGLSLMESLKSTIFSEDSSRNATAAMWKNAGRPN 218 (518) Q Consensus 139 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~p~ 218 (518) |++..+.++ .+.|.|... .+..+.|+.++|||||+++.++ ++|+||+..+...|..+.+++++..++|+||++|+ T Consensus 158 v~~~~~~~~-~~~y~~~~~---~g~~~~~~~~dViHir~~~~dg-~~G~spi~~~~~~i~~~~~~~~~~~~~f~ng~~p~ 232 (431) T protein:vir:10 158 AKGRLTSTW-QIVYDYTTP---TGDKIELPAREVFHLRDLSIDG-VSGVSRVKLSGNALELAEQAERAASRTFRTGVMAG 232 (431) T ss_pred eEEEEcCCC-eEEEEEEeC---CceEEEEchhhEEEecCcCCCC-cccccHHHHHHHHHHHHHHHHHHHHHHHhccCCcc Confidence 999887654 455655432 3556789999999999988776 68999999999999999999999999999999999 Q ss_pred eeeeeCCcCCHHHHHHHHHHHHHHhcCccccccceeccCCcccccccCChhhHHHHHHHHHHHHHHHHHhccchHhhccc Q lcl|Aclame:pro 219 LVLRHEKRLSPEAQQRLREQFDRAHAGSSNTGKTMVVEEGMEPIPLQLTAVEMQFIEARQLNREEVCGVYDIAPPIVHIL 298 (518) Q Consensus 219 gil~~~~~~~~e~~~~~~~~~~~~~~g~~n~g~~~vl~~g~~~~~~~~~~~d~q~~e~~~~~~~~Ia~~fgVpp~~lg~~ 298 (518) |||++++.+++++.+++++.|++.++|.+|+|+++|+++|++|+++++++.|+||+|++++++++||++|||||++||+. T Consensus 233 gil~~~~~ls~e~~~~~~~~~~~~~~g~~n~g~~~vl~~g~~~~~l~~~~~d~q~le~r~~~~~~Ia~~fgVPp~~lg~~ 312 (431) T protein:vir:10 233 GAIEVPKELSDNAYGRMKASVQENHTGSENAGSWMLLEEGATAKQFSNTAASAQQIENRNHQIEEVARMYGVPRPLLMMD 312 (431) T ss_pred EEEecCCCCCHHHHHHHHHHHHHHhcCccccCCceecCCCceEEEccCChhHHHHHHHHHHhHHHHHHHhCCCHHHhCCC Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred cccccccHHHHHHHHHHHHHHHHHHHHHHHHHhhhcchhh-ccceeeechhhhhccCHHHHHHHHHHHHhCC----CcCH Q lcl|Aclame:pro 299 DRATFSNISAQMRAFYRDTMAIPIARIQSAMDKYVGQYWV-RKNRMKFDIDDVIQPDWEAKSESTQKMVNSG----VATP 373 (518) Q Consensus 299 ~~~~~s~~e~~~~~~~~~~l~P~~~~ie~~ln~~l~~~~~-~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g----~~T~ 373 (518) ++++++|+|++.+.|+++||.||+++||++||++|++... .+++++||++.++++|.+++++.+++++..| +||+ T Consensus 313 ~~~t~sn~eq~~~~f~~~tL~P~~~~ie~~ln~~Ll~~~~~~~~~~~fd~~~llr~d~~~r~~~~~~~~~~G~~~g~lT~ 392 (431) T protein:vir:10 313 DTSWGSGIEQLAIFFIQYGLSHWFVSWEQAAARAFLPEKMLGQRQFKFNEGALLRGTLNDQAAFFSKALGAGGQSPWMKQ 392 (431) T ss_pred CCCccccHHHHHHHHHHHHHHHHHHHHHHHHHhhccChhhcCCceEEEechhhhccCHHHHHHHHHHHHhcccccCccCH Confidence 9999999999999999999999999999999999997644 4678999999999999999999999998765 5999 Q ss_pred HHHHHHHhCCCCCCccCceeeecccccccccccccCCCCCCCCCCCCcccC Q lcl|Aclame:pro 374 NEGREIMGLPRSDDPKADELYANSALQPLGATPDGAVEGEEAPAPKRPAST 424 (518) Q Consensus 374 NE~R~~~g~~pi~~~~gD~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~ 424 (518) ||+|+++||||+++|+||++++|.|+.+.+... ++ |+++ T Consensus 393 NE~R~~~gl~p~~~~~gD~~~~p~n~~~~~~~~-------~~-----p~~~ 431 (431) T protein:vir:10 393 NEVREMLDLPRADDPVADQLRNPMTQKQKGSGD-------EP-----PATT 431 (431) T ss_pred HHHHHHhCCCCCCCccccceecccccccCCCCC-------CC-----CCCC Confidence 999999999999999999999998875432211 11 1111 No 7 >protein:vir:4337 Length: 434 # NCBI annotation: portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:93 # MgeName: D3 # Cross-refs: genbank:acc:NP_061500;genbank:gi:9635589;genbank:GeneID:1262858 Probab=100.00 E-value=6e-96 Score=542.63 Aligned_cols=411 Identities=20% Similarity=0.300 Sum_probs=338.6 Q ss_pred CCCCCCCCCccccccccchhhhhhhccCccCCcccCccchhhHHHHhhhHHHHHHHHHHHHhhccCceEEEEecCCcee- Q lcl|Aclame:pro 1 MLLANGQTLSAPAMAELSPQMQDSYYYAPAVGMQLERQFSLYGGIYKNQPWVRTVIAKRAQALARLPVKCMFTSGDTET- 79 (518) Q Consensus 1 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~v~~ia~~ia~lp~~v~~~~~~~~~- 79 (518) ++|+.+. ++....++++...|.+.. ......++.+.++++++|++||++||++||++||++|+++.++.+ T Consensus 19 ~~~~~~~----~~~~~~~~~~~~~~~g~~-----~~~g~~v~~~~al~~~~V~~~i~~ia~~ia~lp~~~~~~~~~g~~~ 89 (434) T protein:vir:43 19 SLFGWGG----KTIRLTDGAFWSQFLGRE-----SSSGKKVTVDKAMKLSAVWACVRLISTSVAGLPLGVYERKADGSRV 89 (434) T ss_pred hhhcccc----cccccCchHHHHHHhcCC-----ccCCceechhhhhccHHHHHHHHHHHHhhhhCceEEEEEcCCCccc Confidence 3333321 122223444444443322 122234556788999999999999999999999999998766543 Q ss_pred -eecchHHHHHhhccCccCCHHHHHHHHHHHHHHcCCeeEEeeeCCCCceeeeeeeCCcceEEEeccCcceEEEEeeccC Q lcl|Aclame:pro 80 -EEHDTGYAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQKNKSGTPEKLMPMHPSRVAIKRNSRTGRYEYYFQAGA 158 (518) Q Consensus 80 -~~~~~~~~~l~~~PN~~~t~~~f~~~~~~~~ll~G~~~~~i~~~~~G~~~~l~~l~p~~v~~~~~~~~~~~~~~~~~~~ 158 (518) ..+|+.+++|+.+||++||+++||+.++.+++++||+|++|.++ +|++++|+|++|.+|++..+.++. ..|.+.. T Consensus 90 ~~~~~~l~~lL~~~PN~~~t~~~f~~~~~~~lll~Gnay~~i~~~-~G~~~~L~~l~p~~v~~~~~~~g~-~~y~~~~-- 165 (434) T protein:vir:43 90 DARSFPLYDVVHNSPNDDMTAFQFWQAMVASMLLWGNAYAEIRRA-AGRPAALDFLLPSRVDLECDENGR-LKYFYTT-- 165 (434) T ss_pred cccccHHHHHHhccCCCCCCHHHHHHHHHHHHhhcCCeEEEEEeC-CCcEEEEEEEcCcceEEEEcCCCe-EEEEEEe-- Confidence 34556666777899999999999999999999999999998876 799999999999999999887654 4454433 Q ss_pred CCCceeEEEeeeeeEEeecCCCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHccCCcceeeeeCCcCCHHHHHHHHHH Q lcl|Aclame:pro 159 GVGTQLVSFADDEVVPIRFFNPDGLERGLSLMESLKSTIFSEDSSRNATAAMWKNAGRPNLVLRHEKRLSPEAQQRLREQ 238 (518) Q Consensus 159 ~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~p~gil~~~~~~~~e~~~~~~~~ 238 (518) ..+..+.|++++|||+++++.++ .+|+||+..++..|..+.+++++..++|+||++|+|+|++++.+++++.+++++. T Consensus 166 -~~g~~~~~~~~eVih~~~~~~dg-~~G~spi~~~~~~i~~~~~~~~~~~~~f~ng~~~~gil~~~~~l~~e~~~~~r~~ 243 (434) T protein:vir:43 166 -KKGARREIERTNMLHIPAFTLDG-RIGLSAIRYGVDVFGSVMSAEDAANGTFKNGLLPTVAFKVDRILQPAQREEFREY 243 (434) T ss_pred -cCceEEEEccccEEEecCcCCCC-ccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEecCCCCCHHHHHHHHHH Confidence 23457889999999999987666 6899999999999999999999999999999999999999999999999999999 Q ss_pred HHHHhcCccccccceeccCCcccccccCChhhHHHHHHHHHHHHHHHHHhccchHhhcccccc--ccccHHHHHHHHHHH Q lcl|Aclame:pro 239 FDRAHAGSSNTGKTMVVEEGMEPIPLQLTAVEMQFIEARQLNREEVCGVYDIAPPIVHILDRA--TFSNISAQMRAFYRD 316 (518) Q Consensus 239 ~~~~~~g~~n~g~~~vl~~g~~~~~~~~~~~d~q~~e~~~~~~~~Ia~~fgVpp~~lg~~~~~--~~s~~e~~~~~~~~~ 316 (518) |++ +.|..|+|+++|+++|++|++++.++.|+||+|.+++++++||++|||||++||+.+.+ ++++.+++...|+++ T Consensus 244 ~~~-~~g~~nag~~~vl~~g~~~~~l~~~~~d~q~~e~~~~~~~~Ia~~fgVPp~~lg~~~~~~~~~s~~e~~~~~f~~~ 322 (434) T protein:vir:43 244 VKS-VSGAMNSGRSPVLEQGITPETIGINPVDAQLLETREHGVIEICRWFGVPPWMIGQTDKGSNWGTGLEQQMLAFLTF 322 (434) T ss_pred HHH-hcCccccCCccccCCCceEEEccCChhHHHHHHHHHHHHHHHHHHhCCCHHHhCCCcCCccccchHHHHHHHHHHH Confidence 975 67778999999999999999999999999999999999999999999999999987654 489999999999999 Q ss_pred HHHHHHHHHHHHHHhhhcchhhc-cceeeechhhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHHhCCCCCCccCceeee Q lcl|Aclame:pro 317 TMAIPIARIQSAMDKYVGQYWVR-KNRMKFDIDDVIQPDWEAKSESTQKMVNSGVATPNEGREIMGLPRSDDPKADELYA 395 (518) Q Consensus 317 ~l~P~~~~ie~~ln~~l~~~~~~-~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~T~NE~R~~~g~~pi~~~~gD~~~~ 395 (518) ||.||+.+||++||++|++..++ .++++||++.++++|.+++++.+.+++++|+||+||+|+++|+||++ |||++++ T Consensus 323 ~L~P~~~~ie~~ln~kL~~~~~~~~~~~~fd~~~llr~d~~~r~~~~~~~~~~G~~T~NE~R~~~gl~p~~--ggD~~~~ 400 (434) T protein:vir:43 323 SISSITNQIQQCVNKRLLTAPERIRYYAEFSLEGFLKADSAGRAAWYSTMAQNGFMTRNEGRRKENLPELP--GGDILTV 400 (434) T ss_pred HHHHHHHHHHHHHHhhcCChhhhcCceEEEechhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCC--CCCeEee Confidence 99999999999999999987553 57899999999999999999999999999999999999999999996 8999999 Q ss_pred cccccccccccccCCCCCCCCCCCCcccCCCCCccCCcccc Q lcl|Aclame:pro 396 NSALQPLGATPDGAVEGEEAPAPKRPASTPVASLDQSPPAS 436 (518) Q Consensus 396 ~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 436 (518) ++|++|++..++............... +++.+++ T Consensus 401 ~~n~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~ 434 (434) T protein:vir:43 401 QSNLVPIDQLGQSNKSQAVRAALMNWF-------SQPEPQE 434 (434) T ss_pred ccCccchhhhhccCCCcchhhhhhccC-------CCCCCCC Confidence 999999987655433222111111111 1111111 No 8 >protein:vir:1266 Length: 416 # NCBI annotation: hypothetical protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:329 # MgeName: phi-105 # Cross-refs: genbank:acc:NP_690758;genbank:gi:22854998;genbank:GeneID:955213 Probab=100.00 E-value=2.4e-95 Score=539.29 Aligned_cols=410 Identities=18% Similarity=0.264 Sum_probs=350.6 Q ss_pred CCCCC---CCCCccccccccchhhhhhhccCccCCcccCccchhhHHHHhhhHHHHHHHHHHHHhhccCceEEEEecCCc Q lcl|Aclame:pro 1 MLLAN---GQTLSAPAMAELSPQMQDSYYYAPAVGMQLERQFSLYGGIYKNQPWVRTVIAKRAQALARLPVKCMFTSGDT 77 (518) Q Consensus 1 ~~f~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~v~~ia~~ia~lp~~v~~~~~~~ 77 (518) |+|.+ +++..........+++.+.|++.+. .....+..+.++++++|++||++||++||+||++++++++++ T Consensus 1 m~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~v~~~~al~~~~v~~~i~~Ia~~ia~l~~~~~~~~~~~ 75 (416) T protein:vir:12 1 MLLERMFEKRSGSSDHEDGFNNILLNMFGGRKT-----ASGERVSESNSLVQPDIFACVNVLSDDIAKLPIHTYKRTDGG 75 (416) T ss_pred CccchhcccccCccccCccchhHHHHhhcCccc-----ccCceechhhhhccHHHHHHHHHHHHhhhhCceEEEEecCCc Confidence 88875 4444444444455666666654332 222344567788999999999999999999999999987766 Q ss_pred eee-ecchHHHHHhhccCccCCHHHHHHHHHHHHHHcCCeeEEeeeCCCCceeeeeeeCCcceEEEeccCcceEEEEeec Q lcl|Aclame:pro 78 ETE-EHDTGYAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQKNKSGTPEKLMPMHPSRVAIKRNSRTGRYEYYFQA 156 (518) Q Consensus 78 ~~~-~~~~~~~~l~~~PN~~~t~~~f~~~~~~~~ll~G~~~~~i~~~~~G~~~~l~~l~p~~v~~~~~~~~~~~~~~~~~ 156 (518) .+. .+|+.+++|+.+||++||+++||+.++.+++++||+|+++.++..|++.+|||++|.+|++..+.+++.++|.+.. T Consensus 76 ~~~~~~~~l~~~l~~~PN~~~t~~~f~~~~v~~lll~Gna~~~i~r~~~G~~~~L~~l~~~~v~v~~~~~~~~~~~~~~~ 155 (416) T protein:vir:12 76 IERKPEHKSAHAVYARPNPYMTAFTWKKLMMTHVLTWGNAYSYIQFGSHGYPEALFPLRPDYTNAYVHPTTGMLWYQTVL 155 (416) T ss_pred cccccccHHHHHHHhhcccCCCHHHHHHHHHHHHhhcCCeEEEEEECCCCcEEEEEEECCcceEEEEeCCCcEEEEEEec Confidence 544 4566777788999999999999999999999999999999999999999999999999999998888888888754 Q ss_pred cCCCCceeEEEeeeeeEEeecCCCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHccCCcceeeeeCCcCCHHHHHHHH Q lcl|Aclame:pro 157 GAGVGTQLVSFADDEVVPIRFFNPDGLERGLSLMESLKSTIFSEDSSRNATAAMWKNAGRPNLVLRHEKRLSPEAQQRLR 236 (518) Q Consensus 157 ~~~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~p~gil~~~~~~~~e~~~~~~ 236 (518) ++..+.+++.+|||++++++++ ++|+||+..+..++....+++++..++|+||++|++||+++..++++++++++ T Consensus 156 ----~g~~~~~~~~eiih~~~~~~~~-~~G~s~i~~~~~~i~~~~~~~~~~~~~~~ng~~p~~il~~~~~~~~e~~~~~~ 230 (416) T protein:vir:12 156 ----NGKAIELYDYEVLHFKGLSTDG-IHGKSPIGVVREHIGAQAAATKYNAKLYKNEATPRGILKVPAFLDEKPKENVR 230 (416) T ss_pred ----CCeEEEecCccEEEecCcCCCC-cccccHHHHHHHHHHHHHHHHHHHHHHHhcCCCCceEEecCCCCCHHHHHHHH Confidence 3456889999999999888765 78999999999999999999999999999999999999999999999999999 Q ss_pred HHHHHHhcCccccccceeccCCcccccccCChhhHHHHHHHHHHHHHHHHHhccchHhhccccccccccHHHHHHHHHHH Q lcl|Aclame:pro 237 EQFDRAHAGSSNTGKTMVVEEGMEPIPLQLTAVEMQFIEARQLNREEVCGVYDIAPPIVHILDRATFSNISAQMRAFYRD 316 (518) Q Consensus 237 ~~~~~~~~g~~n~g~~~vl~~g~~~~~~~~~~~d~q~~e~~~~~~~~Ia~~fgVpp~~lg~~~~~~~s~~e~~~~~~~~~ 316 (518) +.|+... ++++++|+++|++|+++++++.|+||+|.+++++++||++|||||+++|..+.++++|.+++.+.|+++ T Consensus 231 ~~~~~~~----~~~~~~vl~~g~~~~~l~~~~~d~q~~e~~~~~~~~Ia~~fgVPp~~lg~~~~~t~sn~e~~~~~f~~~ 306 (416) T protein:vir:12 231 KEWKRVN----KVENIAIIDYGLEYQSISMPLQEAQFVESMKFNKAQISMIYKVPLHKLNELDKATFSNIEHQSIEYVRN 306 (416) T ss_pred HHHHHHh----cCCCeeecCCCceEEEccCChhhHHHHHHHHHHHHHHHHHhCCCHHHhCCccCCCcccHHHHHHHHHHH Confidence 9998754 568899999999999999999999999999999999999999999999999999999999999999999 Q ss_pred HHHHHHHHHHHHHHhhhcchhh--ccceeeechhhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHHhCCCCCCccCceee Q lcl|Aclame:pro 317 TMAIPIARIQSAMDKYVGQYWV--RKNRMKFDIDDVIQPDWEAKSESTQKMVNSGVATPNEGREIMGLPRSDDPKADELY 394 (518) Q Consensus 317 ~l~P~~~~ie~~ln~~l~~~~~--~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~T~NE~R~~~g~~pi~~~~gD~~~ 394 (518) ||.||+.+||++||++|++... .+++++||++.+++.|.+++++.+.+++++|++|+||+|+++|+||++ |||+++ T Consensus 307 ~l~P~~~~ie~~l~~~l~~~~~~~~g~~i~fd~~~l~~~d~~~~~~~~~~~~~~G~~T~NE~R~~~gl~Pi~--ggd~~~ 384 (416) T protein:vir:12 307 TLQPWIVNFEQELNVKLFLDHDQKSGHYVKFNIDSELRGDSKTQAEYLKTLHETGVLNKDEIRELLERNPIE--NGDKYI 384 (416) T ss_pred HHHHHHHHHHHHHHHhhcCchhhcCCceEEeechhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCC--Ccceee Confidence 9999999999999999997654 467899999999999999999999999999999999999999999996 899999 Q ss_pred ecccccccccccccCCCCCCCCCCCCcccCCCCCccCCcccc Q lcl|Aclame:pro 395 ANSALQPLGATPDGAVEGEEAPAPKRPASTPVASLDQSPPAS 436 (518) Q Consensus 395 ~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 436 (518) +|+|+++++...+...... ...+.. ++..+++ T Consensus 385 ~~~n~~~~~~~~~~~~~~~-------~~~~~g---ge~~~~g 416 (416) T protein:vir:12 385 SSLNYVFLDFLEEYQRLKA-------GGAMKG---GDNKNEG 416 (416) T ss_pred eccccccccccchhhcccc-------ccccCC---CCCcCCC Confidence 9999999886543322110 000111 1111111 No 9 >protein:vir:1326 Length: 457 # NCBI annotation: gp34 # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:28 # MgeName: phi-C31 # Cross-refs: genbank:acc:NP_047925;swissprot:trembl:q9zxb2;genbank:gi:9631143;uniprot:Q9ZXB2;genbank:GeneID:2715872 Probab=100.00 E-value=2.5e-95 Score=539.19 Aligned_cols=439 Identities=16% Similarity=0.193 Sum_probs=347.3 Q ss_pred CCCCCCCCCccc--cccccc---hhhhhhhccCccCCcccCccchhhHHHHhhhHHHHHHHHHHHHhhccCceEEEEecC Q lcl|Aclame:pro 1 MLLANGQTLSAP--AMAELS---PQMQDSYYYAPAVGMQLERQFSLYGGIYKNQPWVRTVIAKRAQALARLPVKCMFTSG 75 (518) Q Consensus 1 ~~f~~~~~~~~~--~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~v~~ia~~ia~lp~~v~~~~~ 75 (518) -+|+++...... .....+ +.+.. +++....| ..++.+.++++++|++||++||++||+||+++|++++ T Consensus 6 ~l~~r~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g------~~V~~~~al~~~~V~~~v~~Ia~~iA~lp~~~~~~~~ 78 (457) T protein:vir:13 6 ALFGRGHSPALDGIEARAWEPYDPSIYN-LGAVAASG------ETVTPHDALQVSAVFASVRLLSETIATLPLSTYSKRG 78 (457) T ss_pred hhhcccccccccccccccccccchHHHh-hcccccCC------ceechHHhhccHHHHHHHHHHHHhhccCceEEEEecC Confidence 567775554322 222222 22211 22222233 3345578899999999999999999999999999887 Q ss_pred CceeeecchHHHHHhhccCccCCHHHHHHHHHHHHHHcCCeeEEeeeCCCCceeeeeeeCCcceEEEeccCcc---eEEE Q lcl|Aclame:pro 76 DTETEEHDTGYAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQKNKSGTPEKLMPMHPSRVAIKRNSRTG---RYEY 152 (518) Q Consensus 76 ~~~~~~~~~~~~~l~~~PN~~~t~~~f~~~~~~~~ll~G~~~~~i~~~~~G~~~~l~~l~p~~v~~~~~~~~~---~~~~ 152 (518) ++.++..++.++.++..||.+||+++||+.++.+++++||+|++|+++ .|++++|||++|.+|++..+..++ ..++ T Consensus 79 ~~~~~~~~~~l~~~ln~~~n~~t~~~f~~~~~~~lll~Gna~~~i~~~-~g~~~~l~~l~p~~v~v~~~~~~~~~~~~~~ 157 (457) T protein:vir:13 79 GSRKEIVTPEWLDYPNAEPGGMGRIDILSQTVLSLLLQGNAFLAVRWQ-GPNIVGLDVLDPTKIHVHMVMVDGLRRKVFE 157 (457) T ss_pred CcccccccchHHHhccccCCCCCHHHHHHHHHHHHhhcCCeEEEEEec-CCcEEEEEEEccCceEEEEecCCCccceeEE Confidence 777776677666666766668999999999999999999999999766 689999999999999998765543 2333 Q ss_pred EeeccCC-CCceeEEEeeeeeEEeecCCCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHccCCcceeeeeCCcCCHHH Q lcl|Aclame:pro 153 YFQAGAG-VGTQLVSFADDEVVPIRFFNPDGLERGLSLMESLKSTIFSEDSSRNATAAMWKNAGRPNLVLRHEKRLSPEA 231 (518) Q Consensus 153 ~~~~~~~-~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~p~gil~~~~~~~~e~ 231 (518) .|.+... .......|++++|||++++++++.++|+||+..+...|....++++++.++|+||++|++||+++..+++++ T Consensus 158 ~y~~~~~~~~~~~~~~~~~diih~~~~~~~~~~~G~s~i~~~~~~i~~~~~~~~~~~~~f~ng~~p~gil~~~~~ls~e~ 237 (457) T protein:vir:13 158 AYDIDADGNEVLLGWFTPRDVLHIPGMMLPGDFVGCSPISYARESIGLALAAQKYGSKFFANGAMPGAVVEVPGTMSEEG 237 (457) T ss_pred EEEEecCCceeeEEeeCccceEEecCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHHhcCCCcceEEEcCCCCCHHH Confidence 3333222 222345689999999999999998899999999999999999999999999999999999999999999999 Q ss_pred HHHHHHHHHHHhcCccccccceeccCCcccccccCChhhHHHHHHHHHHHHHHHHHhccchHhhcccccccc--ccHHHH Q lcl|Aclame:pro 232 QQRLREQFDRAHAGSSNTGKTMVVEEGMEPIPLQLTAVEMQFIEARQLNREEVCGVYDIAPPIVHILDRATF--SNISAQ 309 (518) Q Consensus 232 ~~~~~~~~~~~~~g~~n~g~~~vl~~g~~~~~~~~~~~d~q~~e~~~~~~~~Ia~~fgVpp~~lg~~~~~~~--s~~e~~ 309 (518) ++++++.|++.++|.+|+|+++||++|++|+++++++.|+||+|++++++++||++|||||++||+.+.+++ +|++++ T Consensus 238 ~~~~~~~~~~~~~g~~nag~~~vl~~g~~~~~l~~~~~d~q~~e~~~~~~~~Ia~~fgVPp~~lg~~~~~~~~~sn~eq~ 317 (457) T protein:vir:13 238 LARAREAWRAANSGVDNAHRVALLTEGAKFSKVAMSPDEAQFLQTRQFQVPEIARIFGVPPHLISDATNSTSWGSGLAEQ 317 (457) T ss_pred HHHHHHHHHHHhcCccccCcceecCCCceEEEccCChhHHHHHHHHHHHHHHHHHHhCCCHHHcCCCCCcccccchHHHH Confidence 999999999999999999999999999999999999999999999999999999999999999998877654 889999 Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcchhhc-cceeeechhhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHHhCCCCCCc Q lcl|Aclame:pro 310 MRAFYRDTMAIPIARIQSAMDKYVGQYWVR-KNRMKFDIDDVIQPDWEAKSESTQKMVNSGVATPNEGREIMGLPRSDDP 388 (518) Q Consensus 310 ~~~~~~~~l~P~~~~ie~~ln~~l~~~~~~-~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~T~NE~R~~~g~~pi~~~ 388 (518) .+.|+++||.||+++||++||++|++..++ .++++||++.++++|.+++++.+.+++++|+||+||+|+++|++|++++ T Consensus 318 ~~~f~~~tl~P~~~~ie~~ln~~L~~~~~~~~~~i~fd~~~l~~~D~~~r~~~~~~~~~~G~~T~NE~R~~~gl~Pi~~g 397 (457) T protein:vir:13 318 NIAFTMFSLRPWLERIEAGFNRLLFAETADRFRFVKFNLDEIKRGAPKERMELWSLGLQNGIYSIDEVRAAEDMTPLPDG 397 (457) T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCccccCceeEEeechhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCC Confidence 999999999999999999999999987654 4678999999999999999999999999999999999999999999987 Q ss_pred cCceeeecccccccccccccCCCCCCCCCCCCcccCCCCCcc-CCccccccccChhhhcch Q lcl|Aclame:pro 389 KADELYANSALQPLGATPDGAVEGEEAPAPKRPASTPVASLD-QSPPASVPGLSPTNSDRS 448 (518) Q Consensus 389 ~gD~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 448 (518) .||++++|+|+++++..........+.+ ...+.+.+..+.+ +..+++....+.++.+.+ T Consensus 398 ~~d~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~d~~~~~~~~~~~~~ 457 (457) T protein:vir:13 398 LGEKYRVPLNLGEVGEEPEPEPAPAPPA-IEPPAEEPDEEPEPEGKPDDEGATEEDDEDDA 457 (457) T ss_pred cccceeeccccccccccccccccCCCCC-CCCCccccCCCCCCCCCCccccCCCCcccccC Confidence 8899999999999876554332222111 1111111111111 111111111111111111 No 10 >protein:vir:1431 Length: 419 # NCBI annotation: putative portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:30 # MgeName: phiE125 # Cross-refs: genbank:acc:NP_536360;genbank:gi:17975165;genbank:GeneID:929165 Probab=100.00 E-value=2.1e-95 Score=539.61 Aligned_cols=412 Identities=18% Similarity=0.236 Sum_probs=344.6 Q ss_pred CCCCCCCCCcccc-ccccchhhhhhhccCccCCcccCccchhhHHHHhhhHHHHHHHHHHHHhhccCceEEEEecCCcee Q lcl|Aclame:pro 1 MLLANGQTLSAPA-MAELSPQMQDSYYYAPAVGMQLERQFSLYGGIYKNQPWVRTVIAKRAQALARLPVKCMFTSGDTET 79 (518) Q Consensus 1 ~~f~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~v~~ia~~ia~lp~~v~~~~~~~~~ 79 (518) |+|.|+..+.... ......|+...+++.... ....++.+.++++++|++||++||++||++||++|++++++.. T Consensus 1 ~~~~r~~~~~~~~~~~~~~~~~~~~~g~~~s~-----~~~~vt~~~al~~~~v~~~v~~ia~~iA~lp~~~~~~~~~~~~ 75 (419) T protein:vir:14 1 MFFSRQLLSNLGQTQMSAGGWVSALLGSSRSD-----SGQVVTPASALALTVLQNCVTLLAESIAQLPIELYERSGEDRK 75 (419) T ss_pred CcccccccccccccccCcchhhHHhhcCCCcc-----CCcccchHHhhccHHHHHHHHHHHHhhccCceEEEEecCCccc Confidence 8888866555543 333345666666543321 1223455778999999999999999999999999998877655 Q ss_pred ee-cchHHHHHhhccCccCCHHHHHHHHHHHHHHcCCeeEEeeeCCCCceeeeeeeCCcceEEEeccCcceEEEEeeccC Q lcl|Aclame:pro 80 EE-HDTGYAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQKNKSGTPEKLMPMHPSRVAIKRNSRTGRYEYYFQAGA 158 (518) Q Consensus 80 ~~-~~~~~~~l~~~PN~~~t~~~f~~~~~~~~ll~G~~~~~i~~~~~G~~~~l~~l~p~~v~~~~~~~~~~~~~~~~~~~ 158 (518) +. +|+.+.+|+.+||++||+++||+.++.+++++||+|++|+++.+|++++|||++|.+|++..+.++ ...|.+... T Consensus 76 ~~~~~~l~~lL~~~PN~~~t~~~f~~~~~~~l~l~Gna~~~i~r~~~G~~~~l~pl~~~~v~v~~~~~~-~~~y~~~~~- 153 (419) T protein:vir:14 76 PATDHPLYSILKYEPNSWQTPFEYQEQSQVAVGLRGNSYSFIDRDSDGVIQGLYPLDNEAVTVMRGSDL-KPVYRVRGS- 153 (419) T ss_pred cccccHHHHHHHhhcccCCCHHHHHHHHHHHHhhcCCeEEEEEECCCCcEEEEEEecCceEEEEECCCc-eEEEEEccC- Confidence 54 555566677799999999999999999999999999999999999999999999999999887665 444554322 Q ss_pred CCCceeEEEeeeeeEEeecCCCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHccCCcceeeeeCCcC----CHHHHHH Q lcl|Aclame:pro 159 GVGTQLVSFADDEVVPIRFFNPDGLERGLSLMESLKSTIFSEDSSRNATAAMWKNAGRPNLVLRHEKRL----SPEAQQR 234 (518) Q Consensus 159 ~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~p~gil~~~~~~----~~e~~~~ 234 (518) ..++.++|+|+++++.++ ++|+||+..+..+|....+++++..++|+||++|+|+|++++.. ++++.++ T Consensus 154 ------~~~~~~~i~h~~~~~~dg-~~G~s~i~~~~~~i~~~~~~~~~~~~~f~ng~~p~gil~~~~~~~~~~~~~~~~~ 226 (419) T protein:vir:14 154 ------DPMPQRLVHHVRWMSING-YTGLSPVLLHANAIGHAQAIQQYAGKSFMNGTALSGVIERPKDAPALKDQASVDR 226 (419) T ss_pred ------cccchhheeEecCcCCCC-cccccHHHHHHHHHHHHHHHHHHHHHHHhccCCccEEEEecCCCCcccCHHHHHH Confidence 237889999999988766 68999999999999999999999999999999999999998765 5888999 Q ss_pred HHHHHHHHhcCccccccceeccCCcccccccCChhhHHHHHHHHHHHHHHHHHhccchHhhccccccccccHHHHHHHHH Q lcl|Aclame:pro 235 LREQFDRAHAGSSNTGKTMVVEEGMEPIPLQLTAVEMQFIEARQLNREEVCGVYDIAPPIVHILDRATFSNISAQMRAFY 314 (518) Q Consensus 235 ~~~~~~~~~~g~~n~g~~~vl~~g~~~~~~~~~~~d~q~~e~~~~~~~~Ia~~fgVpp~~lg~~~~~~~s~~e~~~~~~~ 314 (518) +++.|++.++|.+|+|+++++++|++|+++++++.|+||+|.+++++++||++|||||++||+.++++++|+|++.+.|+ T Consensus 227 ~~~~~~~~~~g~~nag~~~vl~~g~~~~~l~~~~~d~q~~e~~~~~~~~Ia~~fgVpp~~lg~~~~~t~s~~E~~~~~f~ 306 (419) T protein:vir:14 227 ITDGWNAKFGGSGNAKKVALLQEGMTFRPLSMTNVDAALIDALRLSALDIARIYKIPAHMVNELERATFSNIEHQSLQFV 306 (419) T ss_pred HHHHHHHHhcCccccCCceecCCCceEEEccCChhhHHHHHHHHHHHHHHHHHhCCCHHHhcCCCCCCcccHHHHHHHHH Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred HHHHHHHHHHHHHHHHhhhcchhh-ccceeeechhhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHHhCCCCCCccCcee Q lcl|Aclame:pro 315 RDTMAIPIARIQSAMDKYVGQYWV-RKNRMKFDIDDVIQPDWEAKSESTQKMVNSGVATPNEGREIMGLPRSDDPKADEL 393 (518) Q Consensus 315 ~~~l~P~~~~ie~~ln~~l~~~~~-~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~T~NE~R~~~g~~pi~~~~gD~~ 393 (518) ++||.||+++||++||++|++... ..++++||++.++++|.+++++.+++++++|++|+||+|+++|+||++ |||++ T Consensus 307 ~~~L~P~~~~ie~~l~~kll~~~~~~~~~i~fd~~~l~r~d~~~~~~~~~~~~~~G~~T~NE~R~~~gl~p~~--gGD~~ 384 (419) T protein:vir:14 307 IYTLLPWVKRHEQAKTRDLLLPSERKQYFIEYNLAGLLRGDQSSRYAAYAVGRQWGWLSINDIRRLENMPPVK--GGDIY 384 (419) T ss_pred HHHHHHHHHHHHHHHhhhccCccccCCeEEEEechhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCC--CcCee Confidence 999999999999999999987644 467899999999999999999999999999999999999999999996 89999 Q ss_pred eecccccccccccccCCCCCCCCCCCCcccCCCCCccCCccccccccChhhhcchhH Q lcl|Aclame:pro 394 YANSALQPLGATPDGAVEGEEAPAPKRPASTPVASLDQSPPASVPGLSPTNSDRSTD 450 (518) Q Consensus 394 ~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 450 (518) ++|+|+++++........ + +++.+.. .++.++... T Consensus 385 ~~~~n~~~~~~~~~~~~~-~-----~~~~~~~----------------~~e~~~~l~ 419 (419) T protein:vir:14 385 LSPMNMVDASKPQQLPVG-K-----SEPTKAA----------------IDEIGRILS 419 (419) T ss_pred eeccccccccccccccCC-C-----CCCcccc----------------ccchhcccC Confidence 999999877654321110 0 0000000 001111111 No 11 >protein:vir:105064 Length: 421 # NCBI annotation: putative portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:1465 # MgeName: phiKO2 # Cross-refs: genbank:acc:YP_006584;genbank:gi:46402090;genbank:GeneID:2777930 Probab=100.00 E-value=3.4e-95 Score=538.51 Aligned_cols=414 Identities=18% Similarity=0.228 Sum_probs=341.2 Q ss_pred CCCCCCCCCccccccccchhhhhhhccCccCCcccCccchhhHHHHhhhHHHHHHHHHHHHhhccCceEEEEecCCcee- Q lcl|Aclame:pro 1 MLLANGQTLSAPAMAELSPQMQDSYYYAPAVGMQLERQFSLYGGIYKNQPWVRTVIAKRAQALARLPVKCMFTSGDTET- 79 (518) Q Consensus 1 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~v~~ia~~ia~lp~~v~~~~~~~~~- 79 (518) |.|.+.-.....+....+.| ..++++.... .......++.+.++++++|++||++||++||+|||++|++++++.+ T Consensus 1 m~~~~~~~~~~~~~s~~~~w-~~~~~~~~~~--~~~~g~~vt~~~al~~~~v~~~i~~Ia~~iA~lp~~~~~~~~~g~~~ 77 (421) T protein:vir:10 1 MFIPQMFEGKKRSVSGGGFW-EAMLGGVRSS--HSKAGVMITPETALALSAVRACVTLLAESVAQLPVELYRRDKNGGRQ 77 (421) T ss_pred CCCcchhcccccccCcchhh-HHHhhhhccC--cccCCceechHHhhccHHHHHHHHHHHHhhccCceEEEEEcCCCcee Confidence 55555443333333322222 2233322211 1122334566788999999999999999999999999998766543 Q ss_pred -eecchHHHHHhhccCccCCHHHHHHHHHHHHHHcCCeeEEeeeCCCCceeeeeeeCCcceEEEeccCcceEEEEeeccC Q lcl|Aclame:pro 80 -EEHDTGYAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQKNKSGTPEKLMPMHPSRVAIKRNSRTGRYEYYFQAGA 158 (518) Q Consensus 80 -~~~~~~~~~l~~~PN~~~t~~~f~~~~~~~~ll~G~~~~~i~~~~~G~~~~l~~l~p~~v~~~~~~~~~~~~~~~~~~~ 158 (518) ..+|+.+++|+.+||++||+++||+.++.+++++||+|++++++.+|++++|||++|.+|++..+.++ ..+|.+... T Consensus 78 ~~~~~~l~~lL~~~PN~~~t~~~f~~~~~~~lll~Gna~~~i~r~~~G~~~~L~~l~~~~v~v~~~~~g-~~~y~~~~~- 155 (421) T protein:vir:10 78 RATDHPIYDLIHSQPNKKDTSFEYFEQQQGLLGLEGNCYSIIDRDGKGYPKELIPINPKKVIVLKGPDG-MPYYEIPEI- 155 (421) T ss_pred ecccchHHHHHhhcccCCCCHHHHHHHHHHHHhhcCCeEEEEEEcCCCcEEEEEEecCceEEEEECCCc-eEEEEEcCC- Confidence 34566777788899999999999999999999999999999999999999999999999999887665 455555322 Q ss_pred CCCceeEEEeeeeeEEeecCCCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHccCCcceeeeeCCcC----CHHHHHH Q lcl|Aclame:pro 159 GVGTQLVSFADDEVVPIRFFNPDGLERGLSLMESLKSTIFSEDSSRNATAAMWKNAGRPNLVLRHEKRL----SPEAQQR 234 (518) Q Consensus 159 ~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~p~gil~~~~~~----~~e~~~~ 234 (518) + ..++.++|||+++++.++ ++|+||+..+..+++...+++++..++|+||++|+|+|+++..+ +++++++ T Consensus 156 ---g--~~~~~~eiih~~~~~~d~-~~G~spi~~~~~~i~~~~~~~~~~~~~f~ng~~~~gil~~~~~~~~~~~~e~~~~ 229 (421) T protein:vir:10 156 ---G--ETLPMRMMHHVKVFSLDG-YIGSSPIQTNADVLGLNLAVEEHASAVFRRGATMSGVIERPKEAPAIKSQEKIDQ 229 (421) T ss_pred ---C--cEEchhhEEEecCcCCCC-cccccHHHHHHHHHHHHHHHHHHHHHHHhcCCCccEEEEecCccCccCCHHHHHH Confidence 2 258999999999988765 68999999999999999999999999999999999999998754 8999999 Q ss_pred HHHHHHHHhcCccccccceeccCCcccccccCChhhHHHHHHHHHHHHHHHHHhccchHhhccccccccccHHHHHHHHH Q lcl|Aclame:pro 235 LREQFDRAHAGSSNTGKTMVVEEGMEPIPLQLTAVEMQFIEARQLNREEVCGVYDIAPPIVHILDRATFSNISAQMRAFY 314 (518) Q Consensus 235 ~~~~~~~~~~g~~n~g~~~vl~~g~~~~~~~~~~~d~q~~e~~~~~~~~Ia~~fgVpp~~lg~~~~~~~s~~e~~~~~~~ 314 (518) +++.|++.++|.+|+|+++|+++|++|+++++++.|+||+|.+++++++||++|||||++||+.+.++++|+|++.+.|+ T Consensus 230 ~~~~~~~~~~g~~n~~~~~vl~~g~~~~~l~~~~~d~q~~e~~~~~~~~Ia~~fgVPp~~lg~~~~~t~sn~e~~~~~f~ 309 (421) T protein:vir:10 230 LLAKWTDRYSGINNMFSVALLQEGMSYKQMSQDNEKAQLLQSRQWGVEEVCRLYKIPPHMVQMLAKATNNNIEHQGLQFV 309 (421) T ss_pred HHHHHHHHhcCccccCcceecCCCceEEecCCChhHHHHHHHHHHhHHHHHHHhCCCHHHcCCCcCCccccHHHHHHHHH Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred HHHHHHHHHHHHHHHHhhhcchhh-ccceeeechhhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHHhCCCCCCccCcee Q lcl|Aclame:pro 315 RDTMAIPIARIQSAMDKYVGQYWV-RKNRMKFDIDDVIQPDWEAKSESTQKMVNSGVATPNEGREIMGLPRSDDPKADEL 393 (518) Q Consensus 315 ~~~l~P~~~~ie~~ln~~l~~~~~-~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~T~NE~R~~~g~~pi~~~~gD~~ 393 (518) ++||.|++.+||++||++|++..+ .+++++||++.++++|.+++++.+++++++|+||+||+|+++|+||++ |||++ T Consensus 310 ~~tl~P~~~~ie~~ln~kL~~~~~~~~~~v~fd~~~l~~~d~~~~~~~~~~~~~~G~~T~NE~R~~~gl~p~~--ggD~~ 387 (421) T protein:vir:10 310 MYTLLAWLKRHEGALQRDLLLPSERRDLYIEFNVSGLLRGDQKSRYESYALGRQWGWLSVNDIRRMENLPPIA--GGDKY 387 (421) T ss_pred HHHHHHHHHHHHHHHhhhccCccccCCeEEEEechhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCC--Cccee Confidence 999999999999999999997654 457899999999999999999999999999999999999999999996 89999 Q ss_pred eecccccccccccccCCCCCCCCCCCCcccCCCCCccCCccccccccChhh Q lcl|Aclame:pro 394 YANSALQPLGATPDGAVEGEEAPAPKRPASTPVASLDQSPPASVPGLSPTN 444 (518) Q Consensus 394 ~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 444 (518) ++|+|+++++....+.. .+...++++ . ++ ...+. T Consensus 388 ~~~~n~~~~~~~~~~~~----~~~~~~~~e-----~-d~-------~~~~~ 421 (421) T protein:vir:10 388 LTPLNMVDSAQIIPGDK----KPTAQQMAE-----I-DT-------ILSRT 421 (421) T ss_pred eeccccccccccccCCC----CcccccCcc-----c-cc-------ccccC Confidence 99999987765433221 111101100 0 00 00000 No 12 >protein:vir:1884 Length: 424 # NCBI annotation: head portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:41 # MgeName: HK022 # Cross-refs: genbank:acc:NP_037664;genbank:gi:9634122;genbank:GeneID:1262519 Probab=100.00 E-value=2.8e-95 Score=538.99 Aligned_cols=395 Identities=16% Similarity=0.249 Sum_probs=334.1 Q ss_pred CCCCC-CCCCccccccccchhhhhhhccCccCCcccCccchhhHHHHhhhHHHHHHHHHHHHhhccCceEEEEecCCcee Q lcl|Aclame:pro 1 MLLAN-GQTLSAPAMAELSPQMQDSYYYAPAVGMQLERQFSLYGGIYKNQPWVRTVIAKRAQALARLPVKCMFTSGDTET 79 (518) Q Consensus 1 ~~f~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~v~~ia~~ia~lp~~v~~~~~~~~~ 79 (518) ..|.+ +...+.... ...+. +..... ....++.+.++++++|++||++||++||+||+++|+.+.++.. T Consensus 22 ~~~~~~~~~~~~~~~-~~~~~----~~~~~~------~~~~v~~~~al~~~~v~~cv~~Ia~~iA~lp~~~~~~~~~~~~ 90 (424) T protein:vir:18 22 SWFVGGRLVTPNQGS-QTGPV----SAHGHL------GDSSINDERILQISTVWRCVSLISTLTACLPLDVFETDQNDNR 90 (424) T ss_pred hhhcccccccccccc-ccccc----cccccc------ccccccHHHhhccHHHHHHHHHHHHhhccCceEEEEeecCCce Confidence 33432 222222211 11111 011111 1223556788999999999999999999999999987665532 Q ss_pred ---eecchHHHHHhhccCccCCHHHHHHHHHHHHHHcCCeeEEeeeCCCCceeeeeeeCCcceEEEeccCcceEEEEeec Q lcl|Aclame:pro 80 ---EEHDTGYAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQKNKSGTPEKLMPMHPSRVAIKRNSRTGRYEYYFQA 156 (518) Q Consensus 80 ---~~~~~~~~~l~~~PN~~~t~~~f~~~~~~~~ll~G~~~~~i~~~~~G~~~~l~~l~p~~v~~~~~~~~~~~~~~~~~ 156 (518) ..+|+.+++|+.+||++||+++||+.++.+++++||+|++|+++..|++++|||++|.+|++..+ ++...|.|.. T Consensus 91 ~~~~~~~~l~~lL~~~PN~~~t~~~f~~~~~~~lll~Gnay~~i~r~~~G~~~~L~pl~~~~V~v~~~--~~~~~y~~~~ 168 (424) T protein:vir:18 91 KKVDLSNPLARLLRYSPNQYMTAQEFREAMTMQLCFYGNAYALVDRNSAGDVISLLPLQSANMDVKLV--GKKVVYRYQR 168 (424) T ss_pred eeeccccHHHHHHhhccCCCCCHHHHHHHHHHHHhhcCCeEEEEEECCCCcEEEEEEecCcceEEEEc--CCeEEEEEEe Confidence 24566777777899999999999999999999999999999999999999999999999998775 4566777754 Q ss_pred cCCCCceeEEEeeeeeEEeecCCCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHccCCcceeeeeCCc-CCHHHHHHH Q lcl|Aclame:pro 157 GAGVGTQLVSFADDEVVPIRFFNPDGLERGLSLMESLKSTIFSEDSSRNATAAMWKNAGRPNLVLRHEKR-LSPEAQQRL 235 (518) Q Consensus 157 ~~~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~p~gil~~~~~-~~~e~~~~~ 235 (518) +++.+.|++++|||||++++++ ++|+||+..+..+++.+.+++++..++|+||++|+|||+++.. +++++++++ T Consensus 169 ----~g~~~~~~~~eIih~r~~~~dg-~~G~spi~~~~~~i~~~~a~~~~~~~~f~ng~~p~gil~~~~~~l~~e~~~~~ 243 (424) T protein:vir:18 169 ----DSEYADFSQKEIFHLKGFGFTG-LVGLSPIAFACKSAGVAVAMEDQQRDFFANGAKSPQILSTGEKVLTEQQRSQV 243 (424) T ss_pred ----CCeEEEeccccEEEecCcCCCC-cccccHHHHHHHHHHHHHHHHHHHHHHHHccCCcceEEEeCCcCCCHHHHHHH Confidence 3456789999999999988776 6899999999999999999999999999999999999999875 799999999 Q ss_pred HHHHHHHhcCccccccceeccCCcccccccCChhhHHHHHHHHHHHHHHHHHhccchHhhcccccccc--ccHHHHHHHH Q lcl|Aclame:pro 236 REQFDRAHAGSSNTGKTMVVEEGMEPIPLQLTAVEMQFIEARQLNREEVCGVYDIAPPIVHILDRATF--SNISAQMRAF 313 (518) Q Consensus 236 ~~~~~~~~~g~~n~g~~~vl~~g~~~~~~~~~~~d~q~~e~~~~~~~~Ia~~fgVpp~~lg~~~~~~~--s~~e~~~~~~ 313 (518) ++.|++.++| .|+|+++||++|++|+++++++.|+||+|++++++++||++|||||++||+.+++++ +|+|++.+.| T Consensus 244 ~~~~~~~~~g-~nag~~~vl~~g~~~~~l~~~~~d~q~le~~~~~~~~Ia~~fgVPp~~lg~~~~~t~~~sn~eq~~~~f 322 (424) T protein:vir:18 244 EENFKEIAGG-PVKKRLWILEAGFSTSAIGVTPQDAEMMASRKFQVSELARFFGVPPHLVGDVEKSTSWGSGIEQQNLGF 322 (424) T ss_pred HHHHHHHhCC-cccCCceeccCCceEEecCCChhHHHHHHHHHHHHHHHHHHhCCCHHHhCCCCCcccccccHHHHHHHH Confidence 9999987765 689999999999999999999999999999999999999999999999998876654 8999999999 Q ss_pred HHHHHHHHHHHHHHHHHhhhcchhhc-cceeeechhhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHHhCCCCCCccCce Q lcl|Aclame:pro 314 YRDTMAIPIARIQSAMDKYVGQYWVR-KNRMKFDIDDVIQPDWEAKSESTQKMVNSGVATPNEGREIMGLPRSDDPKADE 392 (518) Q Consensus 314 ~~~~l~P~~~~ie~~ln~~l~~~~~~-~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~T~NE~R~~~g~~pi~~~~gD~ 392 (518) +++||.||+++||++||++|++..++ +++++||++.++++|.+++++.+++++++|+||+||+|+++|+||++ |||+ T Consensus 323 ~~~tl~P~~~~ie~~l~~~L~~~~~~~~~~~~fd~~~llr~d~~~r~~~~~~~~~~G~~T~NE~R~~~gl~pi~--gGD~ 400 (424) T protein:vir:18 323 LQYTLQPYISRWENSIQRWLIPAKDVGRIHAEHNLDGLLRGDSASRAAFMKAMGEAGLRTINEMRRTDNLPPLP--GGDV 400 (424) T ss_pred HHHHHHHHHHHHHHHHHhhcCCccccCCeEEEEechhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCC--CcCe Confidence 99999999999999999999987653 57899999999999999999999999999999999999999999996 8999 Q ss_pred eeecccccccccccccCCCCCCCC Q lcl|Aclame:pro 393 LYANSALQPLGATPDGAVEGEEAP 416 (518) Q Consensus 393 ~~~~~n~~~~~~~~~~~~~~~~~~ 416 (518) +++++|++|++....+..+.++.. T Consensus 401 ~~~~~n~~~l~~~~~~~~p~~~ga 424 (424) T protein:vir:18 401 AMRQSQYVPITDLGTNKEPRNNGA 424 (424) T ss_pred eeeccCccchHhhhccCCCccCCC Confidence 999999999987554322111111 No 13 >protein:vir:102080 Length: 429 # NCBI annotation: portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:1503 # MgeName: Fah # Cross-refs: genbank:acc:YP_512313;genbank:gi:89152482;genbank:GeneID:3953073 Probab=100.00 E-value=6.1e-95 Score=537.09 Aligned_cols=413 Identities=19% Similarity=0.271 Sum_probs=346.8 Q ss_pred CCCCCCC--CCccccccccchhhhhhhccCccCCcccCccchhhHHHHhhhHHHHHHHHHHHHhhccCceEEEEecCCce Q lcl|Aclame:pro 1 MLLANGQ--TLSAPAMAELSPQMQDSYYYAPAVGMQLERQFSLYGGIYKNQPWVRTVIAKRAQALARLPVKCMFTSGDTE 78 (518) Q Consensus 1 ~~f~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~v~~ia~~ia~lp~~v~~~~~~~~ 78 (518) -+|+... .++........+++..+++.. ..++ .++.+.++++++|++||++||++||++||+++++++++. T Consensus 6 ~~f~~~~r~~~~~~~~~~~~~~~~~~~g~~-~~~~------~v~~~~al~~~~v~~~i~~ia~~ia~l~~~~~~~~~~~~ 78 (429) T protein:vir:10 6 KFFNFEKRQTSQVIELNKDDEKLLEWLGIS-PSTI------SVKGKNALKVATVFACIKILSESVSKLPLKIYQEDEYGI 78 (429) T ss_pred hhhcccccCcccccccCCChHHHHHHhcCC-CCcc------eechhhhhccHHHHHHHHHHHHhhccCceEEEEecCCce Confidence 4565332 222223333444554444322 2222 344567889999999999999999999999999887775 Q ss_pred ee-ecchHHHHHhhccCccCCHHHHHHHHHHHHHHcCCeeEEeeeCCCCceeeeeeeCCcceEEEeccCcc-----eEEE Q lcl|Aclame:pro 79 TE-EHDTGYAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQKNKSGTPEKLMPMHPSRVAIKRNSRTG-----RYEY 152 (518) Q Consensus 79 ~~-~~~~~~~~l~~~PN~~~t~~~f~~~~~~~~ll~G~~~~~i~~~~~G~~~~l~~l~p~~v~~~~~~~~~-----~~~~ 152 (518) ++ .+|+.+++|+.+||++||+++||+.++.+++++||+|++++++..|++++|||++|++|++..+..+. ..+| T Consensus 79 ~~~~~~~l~~lL~~~PN~~~t~~~f~~~~~~~lll~Gnay~~i~r~~~G~~~~L~~i~~~~v~v~~~~~~~~~~~~~~~~ 158 (429) T protein:vir:10 79 QRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVYIDDVGLLNSKTKMWY 158 (429) T ss_pred eeccccHHHHHHHhhccCCCCHHHHHHHHHHHHhhcCCeEEEEEECCCCcEEEEEEEcCceeEEEEcCcccccccceEEE Confidence 55 45556666778999999999999999999999999999999999999999999999999998876542 2223 Q ss_pred EeeccCCCCceeEEEeeeeeEEeecCCCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHccCCcceeeeeCCcCCHHHH Q lcl|Aclame:pro 153 YFQAGAGVGTQLVSFADDEVVPIRFFNPDGLERGLSLMESLKSTIFSEDSSRNATAAMWKNAGRPNLVLRHEKRLSPEAQ 232 (518) Q Consensus 153 ~~~~~~~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~p~gil~~~~~~~~e~~ 232 (518) .+ ..++..+.|++++||||+++.+.+.++|+||+..+...++.+.+++++..++|+||++|+++|+++..+++++. T Consensus 159 ~~----~~~g~~~~~~~~evih~~~~~~~~~~~G~s~i~~~~~~i~~~~~~~~~~~~~~~ng~~~~~il~~~~~l~~e~~ 234 (429) T protein:vir:10 159 VV----NTGGQQRVLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGDLNEDAK 234 (429) T ss_pred EE----ccCCeEEEEccccEEEecCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhccCCccEEEEcCCCCCHHHH Confidence 32 23455678999999999988777778999999999999999999999999999999999999999999999999 Q ss_pred HHHHHHHHHHhcCccccccceeccCCcccccccCChhhHHHHHHHHHHHHHHHHHhccchHhhccccccccccHHHHHHH Q lcl|Aclame:pro 233 QRLREQFDRAHAGSSNTGKTMVVEEGMEPIPLQLTAVEMQFIEARQLNREEVCGVYDIAPPIVHILDRATFSNISAQMRA 312 (518) Q Consensus 233 ~~~~~~~~~~~~g~~n~g~~~vl~~g~~~~~~~~~~~d~q~~e~~~~~~~~Ia~~fgVpp~~lg~~~~~~~s~~e~~~~~ 312 (518) +++++.|++.+.|..|+|+++|+++|++|++++.++.|+||+|.+++++++||++|||||++||++++++++|++++.+. T Consensus 235 ~~~~~~~~~~~~g~~n~~~~~vl~~g~~~~~l~~~~~d~q~~e~~~~~~~~Ia~~fgVP~~~lg~~~~~~~sn~e~~~~~ 314 (429) T protein:vir:10 235 KVFRENFESMSSGLQNSHRIALMPVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKATLNNIEQQQQQ 314 (429) T ss_pred HHHHHHHHHHhccccccCceeecCCCceEEEccCChhHHHHHHHHHHHHHHHHHHhCCCHHHhCCCCCCCcccHHHHHHH Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred HHHHHHHHHHHHHHHHHHhhhcchhh--ccceeeechhhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHHhCCCCCCccC Q lcl|Aclame:pro 313 FYRDTMAIPIARIQSAMDKYVGQYWV--RKNRMKFDIDDVIQPDWEAKSESTQKMVNSGVATPNEGREIMGLPRSDDPKA 390 (518) Q Consensus 313 ~~~~~l~P~~~~ie~~ln~~l~~~~~--~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~T~NE~R~~~g~~pi~~~~g 390 (518) |+++||+||+..||++||++|++... .+++++||++.+++.|.+++++.+++++++|++|+||+|+++|+||++ || T Consensus 315 f~~~~l~P~~~~ie~~ln~kl~~~~~~~~g~~~~fd~~~ll~~d~~~~~~~~~~~~~~G~~T~NE~R~~~gl~p~~--gg 392 (429) T protein:vir:10 315 FYTDTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEA--GG 392 (429) T ss_pred HHHHHHHHHHHHHHHHHHHhhcChhhcCCCcEEEeechhhhcCCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCC--Cc Confidence 99999999999999999999997654 467899999999999999999999999999999999999999999996 89 Q ss_pred ceeeecccccccccccccCCCCCC-CCCCCCcccCCCCCccC Q lcl|Aclame:pro 391 DELYANSALQPLGATPDGAVEGEE-APAPKRPASTPVASLDQ 431 (518) Q Consensus 391 D~~~~~~n~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 431 (518) |++++|+|++|++...+....+.. ..+.++. .+++. T Consensus 393 D~~~~~~n~~~~d~~~~~~~k~g~~~~~~~~~-----~~e~~ 429 (429) T protein:vir:10 393 DRLLVNGNMLPIDMAGQAYLKGGDTNGEVSKE-----GNEGN 429 (429) T ss_pred CeeeecccccchhhccccccCCCCCCCCCCCC-----CCCCC Confidence 999999999999875543322211 1111010 00000 No 14 >protein:vir:4509 Length: 424 # NCBI annotation: portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:97 # MgeName: V # Cross-refs: genbank:acc:NP_599035;genbank:gi:19548993;genbank:GeneID:935206 Probab=100.00 E-value=4.9e-95 Score=537.63 Aligned_cols=400 Identities=18% Similarity=0.267 Sum_probs=336.2 Q ss_pred CC----CCCCCCCccccccccchhhhhhhccCccCCcccCccchhhHHHHhhhHHHHHHHHHHHHhhccCceEEEEecCC Q lcl|Aclame:pro 1 ML----LANGQTLSAPAMAELSPQMQDSYYYAPAVGMQLERQFSLYGGIYKNQPWVRTVIAKRAQALARLPVKCMFTSGD 76 (518) Q Consensus 1 ~~----f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~v~~ia~~ia~lp~~v~~~~~~ 76 (518) |+ |.+ ++...|+.+... +....+ +.. ..+..++.+.++++++|++||++||++||++|+++|+++++ T Consensus 17 ~~~~~lf~~-~~~~~~~~~~~~-~~~~~~-~~~------~~~~~vs~~~al~~~~v~~cv~~Ia~~iA~lp~~v~~~~~~ 87 (424) T protein:vir:45 17 VLLDALFRS-KSLENPSTPITG-DAVDTD-GLF------RADVYVSPETAMKLAAVYSCIYVLSSSLAQMPLHVMRRHKG 87 (424) T ss_pred HHHHhhccc-cCCCCCccccch-hhhhhh-ccc------cCCceechHHhhccHHHHHHHHHHHHHHhhCceEEEEecCC Confidence 44 433 444444443332 222211 111 12234556788999999999999999999999999998766 Q ss_pred ceeee-cchHHHHHhhccCccCCHHHHHHHHHHHHHHcCCeeEEeeeCCCCceeeeeeeCCcceEEEeccCcceEEEEee Q lcl|Aclame:pro 77 TETEE-HDTGYAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQKNKSGTPEKLMPMHPSRVAIKRNSRTGRYEYYFQ 155 (518) Q Consensus 77 ~~~~~-~~~~~~~l~~~PN~~~t~~~f~~~~~~~~ll~G~~~~~i~~~~~G~~~~l~~l~p~~v~~~~~~~~~~~~~~~~ 155 (518) +.++. +|+.+++|+.+||++||+++||+.++.+++++||+|++|+++..|++++|+|++|..|++..+ ++...|.+. T Consensus 88 ~~~~~~~~~l~~lL~~~PN~~~t~~~f~~~~v~~lll~Gna~~~i~r~~~G~~~~L~~l~~~~v~i~~~--~~~~~y~~~ 165 (424) T protein:vir:45 88 KVEPARDHPAFYLVHDEPNTWQTSYKWRELKQRHILGWGNGYTWVKRNRRGEVISLDCCMPWETTLMNT--GGRYTYGLY 165 (424) T ss_pred ceeecccchHHHHHHhhcccCCCHHHHHHHHHHHHhhcCCeEEEEEEcCCCcEEEEEEecCceEEEEEc--CCeEEEEEE Confidence 65544 455566677899999999999999999999999999999999999999999999999998764 355666664 Q ss_pred ccCCCCceeEEEeeeeeEEeecCCCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHccCCcceeeeeCCcCCHHHHHHH Q lcl|Aclame:pro 156 AGAGVGTQLVSFADDEVVPIRFFNPDGLERGLSLMESLKSTIFSEDSSRNATAAMWKNAGRPNLVLRHEKRLSPEAQQRL 235 (518) Q Consensus 156 ~~~~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~p~gil~~~~~~~~e~~~~~ 235 (518) .. +....|++++|||||++++++ .+|+||+..+..+|+.+.++++++.++|+||++|++||++++.+++++.+++ T Consensus 166 ~~----~~~~~~~~~eVih~r~~~~d~-~~G~spi~~~~~~i~~~~~~~~~~~~~f~ng~~p~gil~~~~~l~~e~~~~~ 240 (424) T protein:vir:45 166 NE----YGAFAISPDDMIHIRALGNNQ-KMGLSPIMQHAETIGMGMSGQKYTESFFSGNARPAGIVSVKSGLNKESWGWL 240 (424) T ss_pred ec----CceEEECcccEEEecCcCCCC-cccccHHHHHHHHHHHHHHHHHHHHHHHhccCCccEEEEeCCCCCHHHHHHH Confidence 32 224679999999999988765 6899999999999999999999999999999999999999999999999999 Q ss_pred HHHHHHHhcCc-cccccceeccCCcccccccCChhhHHHHHHHHHHHHHHHHHhccchHhhccccccccccHHHHHHHHH Q lcl|Aclame:pro 236 REQFDRAHAGS-SNTGKTMVVEEGMEPIPLQLTAVEMQFIEARQLNREEVCGVYDIAPPIVHILDRATFSNISAQMRAFY 314 (518) Q Consensus 236 ~~~~~~~~~g~-~n~g~~~vl~~g~~~~~~~~~~~d~q~~e~~~~~~~~Ia~~fgVpp~~lg~~~~~~~s~~e~~~~~~~ 314 (518) ++.|++.+.|. +|+|+++|+++|++|+++++++.|+||+|.+++++++||++|||||++||+.++++++|+|++.+.|+ T Consensus 241 ~~~~~~~~~g~~~n~g~~~vl~~g~~~~~l~~~~~d~q~~e~~~~~~~~Ia~~fgVPp~~lg~~~~~t~sn~eq~~~~f~ 320 (424) T protein:vir:45 241 KDQWQKASQALRRQENKTMLLPADLDYKALTVSPVDAQIIDMMKLNRSMIAGIFNIPAHMINDLEKATFSNISAQAIQFV 320 (424) T ss_pred HHHHHHHhccccccCCceeEcCCCceEEEccCChhHHHHHHHHHHHHHHHHHHhCCCHHHhCCCCCCCcccHHHHHHHHH Confidence 99999999885 58999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred HHHHHHHHHHHHHHHHhhhcchhh--ccceeeechhhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHHhCCCCCCccCce Q lcl|Aclame:pro 315 RDTMAIPIARIQSAMDKYVGQYWV--RKNRMKFDIDDVIQPDWEAKSESTQKMVNSGVATPNEGREIMGLPRSDDPKADE 392 (518) Q Consensus 315 ~~~l~P~~~~ie~~ln~~l~~~~~--~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~T~NE~R~~~g~~pi~~~~gD~ 392 (518) ++||.||++.||++||++|++..+ .+++++||++.++++|.+++++.+++++++|+||+||+|+++|+||++ |||+ T Consensus 321 ~~tL~P~~~~ie~~ln~kLl~~~e~~~g~~i~fd~~~llr~d~~~r~~~~~~~~~~g~~T~NE~R~~~gl~pi~--ggD~ 398 (424) T protein:vir:45 321 RYTMMPWVTNWEQELNRRLFTRAELAAGYYVRFNLTGLLRGTPQERAQFYHFAITDGWMSRNEARAFEDMNPVE--GLDE 398 (424) T ss_pred HHHHHHHHHHHHHHHHHhcCChhhhcCCcEEEeechhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCC--Ccce Confidence 999999999999999999998654 457899999999999999999999999999999999999999999996 8999 Q ss_pred eeecccccccccccccCCCCCCCCCCCCcccCCCCCccC Q lcl|Aclame:pro 393 LYANSALQPLGATPDGAVEGEEAPAPKRPASTPVASLDQ 431 (518) Q Consensus 393 ~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 431 (518) +++|+|+++...... +.. .+....++ T Consensus 399 ~~~~~n~~~~~~~~~--------~~~-----~~~~~~~~ 424 (424) T protein:vir:45 399 MLVSVNAANPAGDFK--------PPK-----NDEGKTNE 424 (424) T ss_pred eeecccccccccccC--------CCC-----CCCCCCCC Confidence 999999865321110 000 00000000 No 15 >protein:vir:1380 Length: 422 # NCBI annotation: putative portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:314 # MgeName: phi3626 # Cross-refs: genbank:acc:NP_612832;genbank:gi:20065966;genbank:GeneID:935782 Probab=100.00 E-value=3.6e-95 Score=538.33 Aligned_cols=409 Identities=17% Similarity=0.252 Sum_probs=344.7 Q ss_pred CCCCCCCCCcccccc-ccchhhhhhhccCccCCcccCccchhhHHHHhhhHHHHHHHHHHHHhhccCceEEEEecCCcee Q lcl|Aclame:pro 1 MLLANGQTLSAPAMA-ELSPQMQDSYYYAPAVGMQLERQFSLYGGIYKNQPWVRTVIAKRAQALARLPVKCMFTSGDTET 79 (518) Q Consensus 1 ~~f~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~v~~ia~~ia~lp~~v~~~~~~~~~ 79 (518) -||+++...+.+... ...+.+.....+.+ ....+.....++...++++++|++||++||++||++|+++++.++ . T Consensus 6 ~lf~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~v~~~~al~~~~v~~ci~~ia~~iA~lp~~~~~~~~---~ 81 (422) T protein:vir:13 6 GLFNKKNNNDEKRSNYDEDIGIDISDSNFW-EKFGIKLNFSVRGKRALKENTVYVCTKIRAESIGKLSLKIYKDKE---E 81 (422) T ss_pred hhhhccCCccchhhhhhhccccccCcchhh-hhccccCCcccchhhhhccHHHHHHHHHHHHhhhhCceEEEecCc---c Confidence 478776655443211 11111110000000 001112233456677889999999999999999999999998643 2 Q ss_pred eecchHHHHHhhccCccCCHHHHHHHHHHHHHHcCCeeEEeeeCCCCceeeeeeeCCcceEEEeccCcc-----eEEEEe Q lcl|Aclame:pro 80 EEHDTGYAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQKNKSGTPEKLMPMHPSRVAIKRNSRTG-----RYEYYF 154 (518) Q Consensus 80 ~~~~~~~~~l~~~PN~~~t~~~f~~~~~~~~ll~G~~~~~i~~~~~G~~~~l~~l~p~~v~~~~~~~~~-----~~~~~~ 154 (518) ..+|+.+++|+.+||++||+++||+.++.+++++||+|++|+++..|++++|+|++|.+|++..+.++. ...|.+ T Consensus 82 ~~~~~~~~lL~~~PN~~~t~~~f~~~~~~~lll~Gna~~~i~r~~~G~~~~L~~i~~~~v~~~~~~~~~~~~~~~~~y~~ 161 (422) T protein:vir:13 82 YKEHELYYLLRYKPNPLMSSINFWKCLETQRTLKGNAYAYIERDRKGKIIGLYPINSDNVTKIIDDDNFLSSLSKVWYVV 161 (422) T ss_pred cccchHHHHHhhhcccCCCHHHHHHHHHHHHhhcCCeEEEEEECCCCcEEEEEEECCcceEEEEcCCcceeccceEEEEE Confidence 346677788888999999999999999999999999999999999999999999999999999987763 344444 Q ss_pred eccCCCCceeEEEeeeeeEEeecCCCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHccCCcceeeeeCCcCCHHHHHH Q lcl|Aclame:pro 155 QAGAGVGTQLVSFADDEVVPIRFFNPDGLERGLSLMESLKSTIFSEDSSRNATAAMWKNAGRPNLVLRHEKRLSPEAQQR 234 (518) Q Consensus 155 ~~~~~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~p~gil~~~~~~~~e~~~~ 234 (518) .. .++..+.+++++|||++.+.+.+.++|+||+..+..+|..+.++++++.++|+||++|+|+|++++.+++++.++ T Consensus 162 ~~---~~g~~~~~~~~eiih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~f~ng~~p~gil~~~~~l~~e~~~~ 238 (422) T protein:vir:13 162 TD---KNGKEHKLLPDEMLHFIGDITLDGLIGIKPLDYLRCTIENGRATQEFINKFFKNGLSIKGIVQYVGDLDEKAKKI 238 (422) T ss_pred Ee---CCCeEEEEcccceEEEcCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhccCCccEEEEeCCCCCHHHHHH Confidence 32 345677899999999998766677899999999999999999999999999999999999999999999999999 Q ss_pred HHHHHHHHhcCccccccceeccCCcccccccCChhhHHHHHHHHHHHHHHHHHhccchHhhccccccccccHHHHHHHHH Q lcl|Aclame:pro 235 LREQFDRAHAGSSNTGKTMVVEEGMEPIPLQLTAVEMQFIEARQLNREEVCGVYDIAPPIVHILDRATFSNISAQMRAFY 314 (518) Q Consensus 235 ~~~~~~~~~~g~~n~g~~~vl~~g~~~~~~~~~~~d~q~~e~~~~~~~~Ia~~fgVpp~~lg~~~~~~~s~~e~~~~~~~ 314 (518) +++.|++.++|.+|+|+++|+++|++|++++.++.|+||+|.+++++++||++|||||+++|..++++++|++++.+.|+ T Consensus 239 ~~~~~~~~~~g~~n~~~~~vl~~g~~~~~l~~~~~d~q~le~~~~~~~~Ia~~fgVpp~~lg~~~~~~~sn~e~~~~~f~ 318 (422) T protein:vir:13 239 FKKEFESMSNGLENAHSISLLPFGYQFQPISLSMADAQFLENSKLTKRELAATFGMKSYHLNDLERATFNNLTEQQKDFY 318 (422) T ss_pred HHHHHHHHhcCccccCCceecCCCceeeeccCChhHHHHHHHHHHHHHHHHHHhCCCHHHhCCCCCCCcccHHHHHHHHH Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred HHHHHHHHHHHHHHHHhhhcchhhc--cceeeechhhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHHhCCCCCCccCce Q lcl|Aclame:pro 315 RDTMAIPIARIQSAMDKYVGQYWVR--KNRMKFDIDDVIQPDWEAKSESTQKMVNSGVATPNEGREIMGLPRSDDPKADE 392 (518) Q Consensus 315 ~~~l~P~~~~ie~~ln~~l~~~~~~--~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~T~NE~R~~~g~~pi~~~~gD~ 392 (518) ++||.||+.+||++||++|++..+. +++++||++.++++|.+++++.+++++++|+||+||+|+++|+||++ |||+ T Consensus 319 ~~~l~P~~~~ie~~l~~~Ll~~~~~~~g~~i~fd~~~l~r~d~~~~~~~~~~~~~~G~~T~NE~R~~~gl~p~~--ggD~ 396 (422) T protein:vir:13 319 VTTLQSSLTVYEQEIQDKLFSQYETLQDVKAEFNVDTILRSDIKTRYEAYRIGIQGGFIEANEARRRENLPPVE--GGDR 396 (422) T ss_pred HHHHHHHHHHHHHHHHHhhCChhhhcCCceEEeechhhhcCCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCC--CcCe Confidence 9999999999999999999987654 57899999999999999999999999999999999999999999996 8999 Q ss_pred eeecccccccccccccCCCCCCCCCCCCcccCCCCCccC Q lcl|Aclame:pro 393 LYANSALQPLGATPDGAVEGEEAPAPKRPASTPVASLDQ 431 (518) Q Consensus 393 ~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 431 (518) +++++|++|++..++...++... .++ T Consensus 397 ~~~~~n~~~l~~~~~~~~~~g~~-------------~g~ 422 (422) T protein:vir:13 397 LLVNGNMIPIEMAGEQYKKGGEK-------------GGK 422 (422) T ss_pred eeeccCccchhhcccccccCCCc-------------CCC Confidence 99999999998765432211100 000 No 16 >protein:vir:102855 Length: 432 # NCBI annotation: phage portal protein, HK97 family # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:1492 # MgeName: Cherry # Cross-refs: genbank:acc:YP_338135;genbank:gi:77020228;genbank:GeneID:3703764 Probab=100.00 E-value=1.4e-94 Score=535.21 Aligned_cols=414 Identities=19% Similarity=0.277 Sum_probs=345.9 Q ss_pred CCCC--CCCCCccccccccchhhhhhhccCccCCcccCccchhhHHHHhhhHHHHHHHHHHHHhhccCceEEEEecCCce Q lcl|Aclame:pro 1 MLLA--NGQTLSAPAMAELSPQMQDSYYYAPAVGMQLERQFSLYGGIYKNQPWVRTVIAKRAQALARLPVKCMFTSGDTE 78 (518) Q Consensus 1 ~~f~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~v~~ia~~ia~lp~~v~~~~~~~~ 78 (518) -+|+ ++.+.+........+++..+++.. ..+ ..++.+.++++++|++||++||++||++|++++++++++. T Consensus 9 ~~~~~~~r~~~~~~~~~~~~~~~~~~~g~~-~~~------~~v~~~~al~~~~v~~~i~~ia~~ia~lp~~~~~~~~~~~ 81 (432) T protein:vir:10 9 KFFNFEKRQTSQVIELNKDDEKLLEWLGIS-PST------ISVKGKNALKVATVFACIKILSESVSKLPLKIYQEDEYGI 81 (432) T ss_pred HhcCccccCcccccccCCchHHHHHHhCCC-cCc------cccchhhhhccHHHHHHHHHHHHhhccCceEEEEecCCce Confidence 1343 333333333333344444433321 122 2345567889999999999999999999999999987776 Q ss_pred eee-cchHHHHHhhccCccCCHHHHHHHHHHHHHHcCCeeEEeeeCCCCceeeeeeeCCcceEEEeccCc-----ceEEE Q lcl|Aclame:pro 79 TEE-HDTGYAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQKNKSGTPEKLMPMHPSRVAIKRNSRT-----GRYEY 152 (518) Q Consensus 79 ~~~-~~~~~~~l~~~PN~~~t~~~f~~~~~~~~ll~G~~~~~i~~~~~G~~~~l~~l~p~~v~~~~~~~~-----~~~~~ 152 (518) .+. +|+..++|+.+||++||+++||+.++.+++++||+|++++++..|++++|||++|.+|++..+..+ ...+| T Consensus 82 ~~~~~~~l~~lL~~~PN~~~t~~~f~~~~~~~lll~Gnay~~i~r~~~G~~~~L~~i~~~~v~v~~d~~~~~~~~~~~~y 161 (432) T protein:vir:10 82 QRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVYIDDVGLLNSKTKMWY 161 (432) T ss_pred eeccccHHHHHHHhhccCCCCHHHHHHHHHHHHhhcCCeEEEEEECCCCcEEEEEEEcCceeEEEEcCcccccccceEEE Confidence 554 455566666799999999999999999999999999999999999999999999999999887543 22333 Q ss_pred EeeccCCCCceeEEEeeeeeEEeecCCCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHccCCcceeeeeCCcCCHHHH Q lcl|Aclame:pro 153 YFQAGAGVGTQLVSFADDEVVPIRFFNPDGLERGLSLMESLKSTIFSEDSSRNATAAMWKNAGRPNLVLRHEKRLSPEAQ 232 (518) Q Consensus 153 ~~~~~~~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~p~gil~~~~~~~~e~~ 232 (518) .+. .++..+.|++++||||+++.+.+.++|+||+..+..+|....+++++..++|+||++|+|+|++++.+++++. T Consensus 162 ~~~----~~g~~~~~~~~eiih~r~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~p~gil~~~~~l~~e~~ 237 (432) T protein:vir:10 162 VVN----TGGQQRVLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGDLNEDAK 237 (432) T ss_pred EEe----cCCeEEEEccccEEEecCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhccCCccEEEEcCCCCCHHHH Confidence 332 3456788999999999987777778999999999999999999999999999999999999999999999999 Q ss_pred HHHHHHHHHHhcCccccccceeccCCcccccccCChhhHHHHHHHHHHHHHHHHHhccchHhhccccccccccHHHHHHH Q lcl|Aclame:pro 233 QRLREQFDRAHAGSSNTGKTMVVEEGMEPIPLQLTAVEMQFIEARQLNREEVCGVYDIAPPIVHILDRATFSNISAQMRA 312 (518) Q Consensus 233 ~~~~~~~~~~~~g~~n~g~~~vl~~g~~~~~~~~~~~d~q~~e~~~~~~~~Ia~~fgVpp~~lg~~~~~~~s~~e~~~~~ 312 (518) +++++.|++.++|..|+|+++|+++|++|++++.++.|+||+|.+++++++||++|||||+++|.+++++++|++++.+. T Consensus 238 ~~~~~~~~~~~~g~~n~~~~~vl~~g~~~~~l~~~~~d~q~~e~~~~~~~~Ia~~fgVP~~~lg~~~~~~~s~~e~~~~~ 317 (432) T protein:vir:10 238 KVFRENFESMSSGLQNSHRIALMPVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKATLNNIEQQQQQ 317 (432) T ss_pred HHHHHHHHHHhcccccCCcceecCCCceEEEccCChhHHHHHHHHHHHHHHHHHHhCCCHHHhCCCCCCCcccHHHHHHH Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred HHHHHHHHHHHHHHHHHHhhhcchhh--ccceeeechhhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHHhCCCCCCccC Q lcl|Aclame:pro 313 FYRDTMAIPIARIQSAMDKYVGQYWV--RKNRMKFDIDDVIQPDWEAKSESTQKMVNSGVATPNEGREIMGLPRSDDPKA 390 (518) Q Consensus 313 ~~~~~l~P~~~~ie~~ln~~l~~~~~--~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~T~NE~R~~~g~~pi~~~~g 390 (518) |+++||+|++.+||++||++|++..+ .+++++||++.+++.|.+++++.+++++++|++|+||+|+++|+||++ || T Consensus 318 ~~~~~l~P~~~~ie~~ln~kLl~~~~~~~g~~~~fd~~~l~~~d~~~~~~~~~~~~~~G~~t~NE~R~~~g~~pi~--gg 395 (432) T protein:vir:10 318 FYTDTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEA--GG 395 (432) T ss_pred HHHHHHHHHHHHHHHHHHHhhcChhhcCCCcEEEeechhhhcCCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCC--CC Confidence 99999999999999999999997654 467899999999999999999999999999999999999999999996 89 Q ss_pred ceeeecccccccccccccCCCCCCCCCCCCcccCCCCCccCCcc Q lcl|Aclame:pro 391 DELYANSALQPLGATPDGAVEGEEAPAPKRPASTPVASLDQSPP 434 (518) Q Consensus 391 D~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 434 (518) |++++|+|++|++...+....+..... +...++.+.+ T Consensus 396 D~~~~~~n~~~~~~~~~~~~k~~~~~~-------~~~~~~~~~~ 432 (432) T protein:vir:10 396 DRLLVNGNMLPIDMAGQAYLKGGDTNG-------EVSKEGNEGN 432 (432) T ss_pred CeEeecccccchhhccccccCCCCCCC-------CCCCCCCCCC Confidence 999999999999876543332211100 0000000100 No 17 >protein:vir:107605 Length: 432 # NCBI annotation: phage portal protein, HK97 family # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:1491 # MgeName: Gamma # Cross-refs: genbank:acc:YP_338186;genbank:gi:77020175;genbank:GeneID:3703736 Probab=100.00 E-value=1.4e-94 Score=535.21 Aligned_cols=414 Identities=19% Similarity=0.277 Sum_probs=345.9 Q ss_pred CCCC--CCCCCccccccccchhhhhhhccCccCCcccCccchhhHHHHhhhHHHHHHHHHHHHhhccCceEEEEecCCce Q lcl|Aclame:pro 1 MLLA--NGQTLSAPAMAELSPQMQDSYYYAPAVGMQLERQFSLYGGIYKNQPWVRTVIAKRAQALARLPVKCMFTSGDTE 78 (518) Q Consensus 1 ~~f~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~v~~ia~~ia~lp~~v~~~~~~~~ 78 (518) -+|+ ++.+.+........+++..+++.. ..+ ..++.+.++++++|++||++||++||++|++++++++++. T Consensus 9 ~~~~~~~r~~~~~~~~~~~~~~~~~~~g~~-~~~------~~v~~~~al~~~~v~~~i~~ia~~ia~lp~~~~~~~~~~~ 81 (432) T protein:vir:10 9 KFFNFEKRQTSQVIELNKDDEKLLEWLGIS-PST------ISVKGKNALKVATVFACIKILSESVSKLPLKIYQEDEYGI 81 (432) T ss_pred HhcCccccCcccccccCCchHHHHHHhCCC-cCc------cccchhhhhccHHHHHHHHHHHHhhccCceEEEEecCCce Confidence 1343 333333333333344444433321 122 2345567889999999999999999999999999987776 Q ss_pred eee-cchHHHHHhhccCccCCHHHHHHHHHHHHHHcCCeeEEeeeCCCCceeeeeeeCCcceEEEeccCc-----ceEEE Q lcl|Aclame:pro 79 TEE-HDTGYAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQKNKSGTPEKLMPMHPSRVAIKRNSRT-----GRYEY 152 (518) Q Consensus 79 ~~~-~~~~~~~l~~~PN~~~t~~~f~~~~~~~~ll~G~~~~~i~~~~~G~~~~l~~l~p~~v~~~~~~~~-----~~~~~ 152 (518) .+. +|+..++|+.+||++||+++||+.++.+++++||+|++++++..|++++|||++|.+|++..+..+ ...+| T Consensus 82 ~~~~~~~l~~lL~~~PN~~~t~~~f~~~~~~~lll~Gnay~~i~r~~~G~~~~L~~i~~~~v~v~~d~~~~~~~~~~~~y 161 (432) T protein:vir:10 82 QRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVYIDDVGLLNSKTKMWY 161 (432) T ss_pred eeccccHHHHHHHhhccCCCCHHHHHHHHHHHHhhcCCeEEEEEECCCCcEEEEEEEcCceeEEEEcCcccccccceEEE Confidence 554 455566666799999999999999999999999999999999999999999999999999887543 22333 Q ss_pred EeeccCCCCceeEEEeeeeeEEeecCCCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHccCCcceeeeeCCcCCHHHH Q lcl|Aclame:pro 153 YFQAGAGVGTQLVSFADDEVVPIRFFNPDGLERGLSLMESLKSTIFSEDSSRNATAAMWKNAGRPNLVLRHEKRLSPEAQ 232 (518) Q Consensus 153 ~~~~~~~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~p~gil~~~~~~~~e~~ 232 (518) .+. .++..+.|++++||||+++.+.+.++|+||+..+..+|....+++++..++|+||++|+|+|++++.+++++. T Consensus 162 ~~~----~~g~~~~~~~~eiih~r~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~p~gil~~~~~l~~e~~ 237 (432) T protein:vir:10 162 VVN----TGGQQRVLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGDLNEDAK 237 (432) T ss_pred EEe----cCCeEEEEccccEEEecCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhccCCccEEEEcCCCCCHHHH Confidence 332 3456788999999999987777778999999999999999999999999999999999999999999999999 Q ss_pred HHHHHHHHHHhcCccccccceeccCCcccccccCChhhHHHHHHHHHHHHHHHHHhccchHhhccccccccccHHHHHHH Q lcl|Aclame:pro 233 QRLREQFDRAHAGSSNTGKTMVVEEGMEPIPLQLTAVEMQFIEARQLNREEVCGVYDIAPPIVHILDRATFSNISAQMRA 312 (518) Q Consensus 233 ~~~~~~~~~~~~g~~n~g~~~vl~~g~~~~~~~~~~~d~q~~e~~~~~~~~Ia~~fgVpp~~lg~~~~~~~s~~e~~~~~ 312 (518) +++++.|++.++|..|+|+++|+++|++|++++.++.|+||+|.+++++++||++|||||+++|.+++++++|++++.+. T Consensus 238 ~~~~~~~~~~~~g~~n~~~~~vl~~g~~~~~l~~~~~d~q~~e~~~~~~~~Ia~~fgVP~~~lg~~~~~~~s~~e~~~~~ 317 (432) T protein:vir:10 238 KVFRENFESMSSGLQNSHRIALMPVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKATLNNIEQQQQQ 317 (432) T ss_pred HHHHHHHHHHhcccccCCcceecCCCceEEEccCChhHHHHHHHHHHHHHHHHHHhCCCHHHhCCCCCCCcccHHHHHHH Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred HHHHHHHHHHHHHHHHHHhhhcchhh--ccceeeechhhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHHhCCCCCCccC Q lcl|Aclame:pro 313 FYRDTMAIPIARIQSAMDKYVGQYWV--RKNRMKFDIDDVIQPDWEAKSESTQKMVNSGVATPNEGREIMGLPRSDDPKA 390 (518) Q Consensus 313 ~~~~~l~P~~~~ie~~ln~~l~~~~~--~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~T~NE~R~~~g~~pi~~~~g 390 (518) |+++||+|++.+||++||++|++..+ .+++++||++.+++.|.+++++.+++++++|++|+||+|+++|+||++ || T Consensus 318 ~~~~~l~P~~~~ie~~ln~kLl~~~~~~~g~~~~fd~~~l~~~d~~~~~~~~~~~~~~G~~t~NE~R~~~g~~pi~--gg 395 (432) T protein:vir:10 318 FYTDTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEA--GG 395 (432) T ss_pred HHHHHHHHHHHHHHHHHHHhhcChhhcCCCcEEEeechhhhcCCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCC--CC Confidence 99999999999999999999997654 467899999999999999999999999999999999999999999996 89 Q ss_pred ceeeecccccccccccccCCCCCCCCCCCCcccCCCCCccCCcc Q lcl|Aclame:pro 391 DELYANSALQPLGATPDGAVEGEEAPAPKRPASTPVASLDQSPP 434 (518) Q Consensus 391 D~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 434 (518) |++++|+|++|++...+....+..... +...++.+.+ T Consensus 396 D~~~~~~n~~~~~~~~~~~~k~~~~~~-------~~~~~~~~~~ 432 (432) T protein:vir:10 396 DRLLVNGNMLPIDMAGQAYLKGGDTNG-------EVSKEGNEGN 432 (432) T ss_pred CeEeecccccchhhccccccCCCCCCC-------CCCCCCCCCC Confidence 999999999999876543332211100 0000000100 No 18 >protein:vir:105002 Length: 432 # NCBI annotation: putative phage portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:1490 # MgeName: W Beta # Cross-refs: genbank:acc:YP_459967;genbank:gi:85701382;genbank:GeneID:3882143 Probab=100.00 E-value=1.4e-94 Score=535.21 Aligned_cols=414 Identities=19% Similarity=0.277 Sum_probs=345.9 Q ss_pred CCCC--CCCCCccccccccchhhhhhhccCccCCcccCccchhhHHHHhhhHHHHHHHHHHHHhhccCceEEEEecCCce Q lcl|Aclame:pro 1 MLLA--NGQTLSAPAMAELSPQMQDSYYYAPAVGMQLERQFSLYGGIYKNQPWVRTVIAKRAQALARLPVKCMFTSGDTE 78 (518) Q Consensus 1 ~~f~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~v~~ia~~ia~lp~~v~~~~~~~~ 78 (518) -+|+ ++.+.+........+++..+++.. ..+ ..++.+.++++++|++||++||++||++|++++++++++. T Consensus 9 ~~~~~~~r~~~~~~~~~~~~~~~~~~~g~~-~~~------~~v~~~~al~~~~v~~~i~~ia~~ia~lp~~~~~~~~~~~ 81 (432) T protein:vir:10 9 KFFNFEKRQTSQVIELNKDDEKLLEWLGIS-PST------ISVKGKNALKVATVFACIKILSESVSKLPLKIYQEDEYGI 81 (432) T ss_pred HhcCccccCcccccccCCchHHHHHHhCCC-cCc------cccchhhhhccHHHHHHHHHHHHhhccCceEEEEecCCce Confidence 1343 333333333333344444433321 122 2345567889999999999999999999999999987776 Q ss_pred eee-cchHHHHHhhccCccCCHHHHHHHHHHHHHHcCCeeEEeeeCCCCceeeeeeeCCcceEEEeccCc-----ceEEE Q lcl|Aclame:pro 79 TEE-HDTGYAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQKNKSGTPEKLMPMHPSRVAIKRNSRT-----GRYEY 152 (518) Q Consensus 79 ~~~-~~~~~~~l~~~PN~~~t~~~f~~~~~~~~ll~G~~~~~i~~~~~G~~~~l~~l~p~~v~~~~~~~~-----~~~~~ 152 (518) .+. +|+..++|+.+||++||+++||+.++.+++++||+|++++++..|++++|||++|.+|++..+..+ ...+| T Consensus 82 ~~~~~~~l~~lL~~~PN~~~t~~~f~~~~~~~lll~Gnay~~i~r~~~G~~~~L~~i~~~~v~v~~d~~~~~~~~~~~~y 161 (432) T protein:vir:10 82 QRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVYIDDVGLLNSKTKMWY 161 (432) T ss_pred eeccccHHHHHHHhhccCCCCHHHHHHHHHHHHhhcCCeEEEEEECCCCcEEEEEEEcCceeEEEEcCcccccccceEEE Confidence 554 455566666799999999999999999999999999999999999999999999999999887543 22333 Q ss_pred EeeccCCCCceeEEEeeeeeEEeecCCCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHccCCcceeeeeCCcCCHHHH Q lcl|Aclame:pro 153 YFQAGAGVGTQLVSFADDEVVPIRFFNPDGLERGLSLMESLKSTIFSEDSSRNATAAMWKNAGRPNLVLRHEKRLSPEAQ 232 (518) Q Consensus 153 ~~~~~~~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~p~gil~~~~~~~~e~~ 232 (518) .+. .++..+.|++++||||+++.+.+.++|+||+..+..+|....+++++..++|+||++|+|+|++++.+++++. T Consensus 162 ~~~----~~g~~~~~~~~eiih~r~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~p~gil~~~~~l~~e~~ 237 (432) T protein:vir:10 162 VVN----TGGQQRVLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGDLNEDAK 237 (432) T ss_pred EEe----cCCeEEEEccccEEEecCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhccCCccEEEEcCCCCCHHHH Confidence 332 3456788999999999987777778999999999999999999999999999999999999999999999999 Q ss_pred HHHHHHHHHHhcCccccccceeccCCcccccccCChhhHHHHHHHHHHHHHHHHHhccchHhhccccccccccHHHHHHH Q lcl|Aclame:pro 233 QRLREQFDRAHAGSSNTGKTMVVEEGMEPIPLQLTAVEMQFIEARQLNREEVCGVYDIAPPIVHILDRATFSNISAQMRA 312 (518) Q Consensus 233 ~~~~~~~~~~~~g~~n~g~~~vl~~g~~~~~~~~~~~d~q~~e~~~~~~~~Ia~~fgVpp~~lg~~~~~~~s~~e~~~~~ 312 (518) +++++.|++.++|..|+|+++|+++|++|++++.++.|+||+|.+++++++||++|||||+++|.+++++++|++++.+. T Consensus 238 ~~~~~~~~~~~~g~~n~~~~~vl~~g~~~~~l~~~~~d~q~~e~~~~~~~~Ia~~fgVP~~~lg~~~~~~~s~~e~~~~~ 317 (432) T protein:vir:10 238 KVFRENFESMSSGLQNSHRIALMPVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKATLNNIEQQQQQ 317 (432) T ss_pred HHHHHHHHHHhcccccCCcceecCCCceEEEccCChhHHHHHHHHHHHHHHHHHHhCCCHHHhCCCCCCCcccHHHHHHH Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred HHHHHHHHHHHHHHHHHHhhhcchhh--ccceeeechhhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHHhCCCCCCccC Q lcl|Aclame:pro 313 FYRDTMAIPIARIQSAMDKYVGQYWV--RKNRMKFDIDDVIQPDWEAKSESTQKMVNSGVATPNEGREIMGLPRSDDPKA 390 (518) Q Consensus 313 ~~~~~l~P~~~~ie~~ln~~l~~~~~--~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~T~NE~R~~~g~~pi~~~~g 390 (518) |+++||+|++.+||++||++|++..+ .+++++||++.+++.|.+++++.+++++++|++|+||+|+++|+||++ || T Consensus 318 ~~~~~l~P~~~~ie~~ln~kLl~~~~~~~g~~~~fd~~~l~~~d~~~~~~~~~~~~~~G~~t~NE~R~~~g~~pi~--gg 395 (432) T protein:vir:10 318 FYTDTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEA--GG 395 (432) T ss_pred HHHHHHHHHHHHHHHHHHHhhcChhhcCCCcEEEeechhhhcCCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCC--CC Confidence 99999999999999999999997654 467899999999999999999999999999999999999999999996 89 Q ss_pred ceeeecccccccccccccCCCCCCCCCCCCcccCCCCCccCCcc Q lcl|Aclame:pro 391 DELYANSALQPLGATPDGAVEGEEAPAPKRPASTPVASLDQSPP 434 (518) Q Consensus 391 D~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 434 (518) |++++|+|++|++...+....+..... +...++.+.+ T Consensus 396 D~~~~~~n~~~~~~~~~~~~k~~~~~~-------~~~~~~~~~~ 432 (432) T protein:vir:10 396 DRLLVNGNMLPIDMAGQAYLKGGDTNG-------EVSKEGNEGN 432 (432) T ss_pred CeEeecccccchhhccccccCCCCCCC-------CCCCCCCCCC Confidence 999999999999876543332211100 0000000100 No 19 >protein:vir:4454 Length: 414 # NCBI annotation: Portal Protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:96 # MgeName: ST64B # Cross-refs: genbank:acc:NP_700377;genbank:gi:23505449;genbank:GeneID:955656 Probab=100.00 E-value=9.3e-95 Score=536.09 Aligned_cols=407 Identities=20% Similarity=0.296 Sum_probs=337.1 Q ss_pred CCCCCCCCCccccccccchhhhhhhccCccCCcccCccchhhHHHHhhhHHHHHHHHHHHHhhccCceEEEEecCCceee Q lcl|Aclame:pro 1 MLLANGQTLSAPAMAELSPQMQDSYYYAPAVGMQLERQFSLYGGIYKNQPWVRTVIAKRAQALARLPVKCMFTSGDTETE 80 (518) Q Consensus 1 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~v~~ia~~ia~lp~~v~~~~~~~~~~ 80 (518) -||+++.+.+... . ..+...+++.. .......++.+.++++++|++||++||++||++|+++++.++++... T Consensus 6 ~lf~r~~~~~~~~--~--~~~~~~~~~~~----~~~~g~~v~~~~al~~~~v~~~i~~Ia~~ia~~p~~~~~~~~~~~~~ 77 (414) T protein:vir:44 6 GLFQRKSDAPVTT--P--AELADAIGLSY----DTYTGKQISSQRAMRLTAVFSCVRVLAESVGMLPCNLYHLNGSLKQR 77 (414) T ss_pred hhhccCccCcccc--h--hhHhHhhccCc----cccCCceechhhhhccHHHHHHHHHHHHHhccCceEEEEecCCceee Confidence 2344443322211 1 11222222211 11112334456789999999999999999999999999988777655 Q ss_pred e-cchHHHHHhhccCccCCHHHHHHHHHHHHHHcCCeeEEeeeCCCCceeeeeeeCCcceEEEeccCcceEEEEeeccCC Q lcl|Aclame:pro 81 E-HDTGYAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQKNKSGTPEKLMPMHPSRVAIKRNSRTGRYEYYFQAGAG 159 (518) Q Consensus 81 ~-~~~~~~~l~~~PN~~~t~~~f~~~~~~~~ll~G~~~~~i~~~~~G~~~~l~~l~p~~v~~~~~~~~~~~~~~~~~~~~ 159 (518) . +|+.+++|+.+||++||+++||+.++.+++++||+|++++++ .|++++|+|++|.+|++..+..+ ...|.+... T Consensus 78 ~~~~~~~~lL~~~PN~~~t~~~f~~~~~~~~ll~Gna~~~i~~~-~g~~~~L~~l~~~~v~~~~~~~~-~~~y~~~~~-- 153 (414) T protein:vir:44 78 ATGERLHKLISTHPNGYMTPQEFWELVVTCLCLRGNFYAYKVKA-FGEVAELLPVDPGCVVPKLNSSW-EPVYQVTFP-- 153 (414) T ss_pred cccchHHHHHHhhcccCCCHHHHHHHHHHHHhhcCCeEEEEEeC-CCcEEEEEEEcCceEEEEECCCC-cEEEEEEec-- Confidence 4 455566777899999999999999999999999999999877 69999999999999999887654 445555433 Q ss_pred CCceeEEEeeeeeEEeecCCCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHccCCcceeeeeCCcCCHHHHHHHHHHH Q lcl|Aclame:pro 160 VGTQLVSFADDEVVPIRFFNPDGLERGLSLMESLKSTIFSEDSSRNATAAMWKNAGRPNLVLRHEKRLSPEAQQRLREQF 239 (518) Q Consensus 160 ~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~p~gil~~~~~~~~e~~~~~~~~~ 239 (518) ++..+.|++++||||++++.++ ++|+||+..+..+++.+.+++++..++|+||++|+|+|++++.+++++.+++++.| T Consensus 154 -~g~~~~~~~~evih~~~~~~d~-~~G~s~i~~~~~~i~~~~~~~~~~~~~f~ng~~p~gil~~~~~l~~e~~~~~~~~~ 231 (414) T protein:vir:44 154 -DGSTDVLSQEDIWHVRTLTLDG-LVGLNPIAYAREAISLAAATEEHGARLFSNGAVTSGVLRTEQTLSDQAYERLKKDF 231 (414) T ss_pred -CceEEEEccccEEEecCCCCCC-cccccHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEeCCCCCHHHHHHHHHHH Confidence 3456789999999999887765 68999999999999999999999999999999999999999999999999999999 Q ss_pred HHHhcCccccccceeccCCcccccccCChhhHHHHHHHHHHHHHHHHHhccchHhhccccccccccHHHHHHHHHHHHHH Q lcl|Aclame:pro 240 DRAHAGSSNTGKTMVVEEGMEPIPLQLTAVEMQFIEARQLNREEVCGVYDIAPPIVHILDRATFSNISAQMRAFYRDTMA 319 (518) Q Consensus 240 ~~~~~g~~n~g~~~vl~~g~~~~~~~~~~~d~q~~e~~~~~~~~Ia~~fgVpp~~lg~~~~~~~s~~e~~~~~~~~~~l~ 319 (518) ++.++|.+|+|+++++++|++|++++.++.|+||+|.+++++++||++|||||++||+.++++++|+|++.+.|+++||+ T Consensus 232 ~~~~~g~~n~~~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgVpp~~l~~~~~~t~~n~e~~~~~~~~~~l~ 311 (414) T protein:vir:44 232 EERHTGLGNAHRPMILEMGLDWKSMALNAEDSQFLETRKFQLEEICRLFRVPLHMVQNTDRATFNNIEELGLGFINYSLV 311 (414) T ss_pred HHHhcCccccCcceecCCCceEEEccCChHHHHHHHHHHHHHHHHHHHhCCCHHHhCCCCCCCcccHHHHHHHHHHHHHH Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred HHHHHHHHHHHhhhcchhhc-cceeeechhhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHHhCCCCCCccCceeeeccc Q lcl|Aclame:pro 320 IPIARIQSAMDKYVGQYWVR-KNRMKFDIDDVIQPDWEAKSESTQKMVNSGVATPNEGREIMGLPRSDDPKADELYANSA 398 (518) Q Consensus 320 P~~~~ie~~ln~~l~~~~~~-~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~T~NE~R~~~g~~pi~~~~gD~~~~~~n 398 (518) |++++||++||++|++..++ .++++||++.+++.|.+++++.+++++++|++|+||+|+++|+||++ |||++++|.| T Consensus 312 P~~~~ie~~ln~~L~~~~~~~~~~i~fd~~~ll~~d~~~~~~~~~~~~~~G~~t~NE~R~~~gl~p~~--ggD~~~~~~n 389 (414) T protein:vir:44 312 PYLTRIEQRINTGLVRKSKQGVFYAKFNAGALLRGDMKSRFEAYATGINWGIYSPNDCRDLEDMNPRP--GGDVYLTPMN 389 (414) T ss_pred HHHHHHHHHHHhhcCCccccCceEEEEechhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCC--Ccceeccccc Confidence 99999999999999987654 56899999999999999999999999999999999999999999996 8999999999 Q ss_pred ccccccccccCCCCCCCCCCCCccc Q lcl|Aclame:pro 399 LQPLGATPDGAVEGEEAPAPKRPAS 423 (518) Q Consensus 399 ~~~~~~~~~~~~~~~~~~~~~~~~~ 423 (518) +.+............+.....++++ T Consensus 390 ~~~~~~~~~~~~~~~~~~~~d~~~~ 414 (414) T protein:vir:44 390 MTTKPSDGSKAGKQKDNANADETTS 414 (414) T ss_pred ccccCCccccCCCCCCCCCCCCCCC Confidence 8655432221111111111111111 No 20 >protein:vir:189 Length: 424 # NCBI annotation: portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:6 # MgeName: HK97 # Cross-refs: genbank:acc:NP_037699;genbank:gi:9634156;genbank:GeneID:1262529 Probab=100.00 E-value=8.3e-95 Score=536.37 Aligned_cols=395 Identities=16% Similarity=0.246 Sum_probs=333.2 Q ss_pred CCC-CCCCCCccccccccchhhhhhhccCccCCcccCccchhhHHHHhhhHHHHHHHHHHHHhhccCceEEEEecCCcee Q lcl|Aclame:pro 1 MLL-ANGQTLSAPAMAELSPQMQDSYYYAPAVGMQLERQFSLYGGIYKNQPWVRTVIAKRAQALARLPVKCMFTSGDTET 79 (518) Q Consensus 1 ~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~v~~ia~~ia~lp~~v~~~~~~~~~ 79 (518) .+| |++...+.... ...+. ....+.. ...++.+.++++++|++||++||++||++|+++|+.+.++.. T Consensus 22 ~~f~~~~~~~~~~~~-~~~~~----~~~~~~~------~~~v~~~~al~~~~v~~cv~~Ia~~iA~lp~~vy~~~~~~~~ 90 (424) T protein:vir:18 22 SWFVGGRLVTPNQGS-QTGPV----SAHGYLG------DSSINDERILQISTVWRCVSLISTLTACLPLDVFETDQNDNR 90 (424) T ss_pred hhccccccccccchh-hcccc----ccccccc------cccccHHHhhccHHHHHHHHHHHHhhccCceEEEEeccCCce Confidence 334 33332222111 11111 0111111 123456788999999999999999999999999997665432 Q ss_pred ---eecchHHHHHhhccCccCCHHHHHHHHHHHHHHcCCeeEEeeeCCCCceeeeeeeCCcceEEEeccCcceEEEEeec Q lcl|Aclame:pro 80 ---EEHDTGYAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQKNKSGTPEKLMPMHPSRVAIKRNSRTGRYEYYFQA 156 (518) Q Consensus 80 ---~~~~~~~~~l~~~PN~~~t~~~f~~~~~~~~ll~G~~~~~i~~~~~G~~~~l~~l~p~~v~~~~~~~~~~~~~~~~~ 156 (518) ..+|+.+++|+.+||++||+++||+.++.+++++||+|++|+|+..|++++|||++|.+|++..+ ++...|.|.. T Consensus 91 ~~~~~~~~l~~lL~~~PN~~~t~~~f~~~~~~~lll~Gnay~~i~r~~~G~~~~L~~l~~~~v~v~~~--~~~~~y~~~~ 168 (424) T protein:vir:18 91 KKVDLSNPLARLLRYSPNQYMTAQEFREAMTMQLCFYGNAYALVDRNSAGDVISLLPLQSANMDVKLV--GKKVVYRYQR 168 (424) T ss_pred eeeccccHHHHHHhhccCCCCCHHHHHHHHHHHHhhcCCeEEEEEECCCCcEEEEEEecCcceEEEEc--CCeEEEEEEe Confidence 24566777788899999999999999999999999999999999999999999999999998875 4566777754 Q ss_pred cCCCCceeEEEeeeeeEEeecCCCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHccCCcceeeeeCCc-CCHHHHHHH Q lcl|Aclame:pro 157 GAGVGTQLVSFADDEVVPIRFFNPDGLERGLSLMESLKSTIFSEDSSRNATAAMWKNAGRPNLVLRHEKR-LSPEAQQRL 235 (518) Q Consensus 157 ~~~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~p~gil~~~~~-~~~e~~~~~ 235 (518) +++.+.|++++|||||+++.++ ++|+||+..+...|+.+.+++++..++|+||++|+|+|+++.. +++++++++ T Consensus 169 ----~g~~~~~~~~eVihir~~~~dg-~~G~spi~~~~~~i~~~~~~~~~~~~~f~ng~~~~gil~~~~~~l~~e~~~~~ 243 (424) T protein:vir:18 169 ----DSEYADFSQKEIFHLKGFGFTG-LVGLSPIAFACKSAGVAVAMEDQQRDFFANGAKSPQILSTGEKVLTEQQRSQV 243 (424) T ss_pred ----CCeEEEeccccEEEecCcCCCC-cccccHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEeCCcCCCHHHHHHH Confidence 3456789999999999988776 6899999999999999999999999999999999999999875 799999999 Q ss_pred HHHHHHHhcCccccccceeccCCcccccccCChhhHHHHHHHHHHHHHHHHHhccchHhhcccccccc--ccHHHHHHHH Q lcl|Aclame:pro 236 REQFDRAHAGSSNTGKTMVVEEGMEPIPLQLTAVEMQFIEARQLNREEVCGVYDIAPPIVHILDRATF--SNISAQMRAF 313 (518) Q Consensus 236 ~~~~~~~~~g~~n~g~~~vl~~g~~~~~~~~~~~d~q~~e~~~~~~~~Ia~~fgVpp~~lg~~~~~~~--s~~e~~~~~~ 313 (518) ++.|++.++| .|+|+++||++|++|+++++++.|+||+|++++++++||++|||||++||+.+++++ +|+|++.+.| T Consensus 244 ~~~~~~~~~~-~nag~~~vl~~g~~~~~l~~~~~d~q~~e~~~~~~~~Ia~~fgVPp~~lg~~~~~t~~~sn~eq~~~~f 322 (424) T protein:vir:18 244 EENFKEIAGG-PVKKRLWILEAGFSTSAIGVTPQDAEMMASRKFQVSELARFFGVPPHLVGDVEKSTSWGSGIEQQNLGF 322 (424) T ss_pred HHHHHHHhCC-cccCCceeccCCceEEecCCChhHHHHHHHHHHhHHHHHHHhCCCHHHhCCCCCcccccccHHHHHHHH Confidence 9999987655 689999999999999999999999999999999999999999999999998876665 8999999999 Q ss_pred HHHHHHHHHHHHHHHHHhhhcchhh-ccceeeechhhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHHhCCCCCCccCce Q lcl|Aclame:pro 314 YRDTMAIPIARIQSAMDKYVGQYWV-RKNRMKFDIDDVIQPDWEAKSESTQKMVNSGVATPNEGREIMGLPRSDDPKADE 392 (518) Q Consensus 314 ~~~~l~P~~~~ie~~ln~~l~~~~~-~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~T~NE~R~~~g~~pi~~~~gD~ 392 (518) +++||.||+++||++||++|++..+ ..++++||++.++++|.+++++.+++++++|+||+||+|+++|+||++ |||+ T Consensus 323 ~~~tl~P~~~~ie~~ln~~L~~~~~~~~~~~~fd~~~llr~d~~~r~~~~~~~~~~G~~T~NE~R~~~gl~pi~--ggD~ 400 (424) T protein:vir:18 323 LQYTLQPYISRWENSIQRWLIPSKDVGRLHAEHNLDGLLRGDSASRAAFMKAMGESGLRTINEMRRTDNMPPLP--GGDV 400 (424) T ss_pred HHHHHHHHHHHHHHHHHhhcCCccccCCeEEEEechhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCC--CcCe Confidence 9999999999999999999998755 357899999999999999999999999999999999999999999995 8999 Q ss_pred eeecccccccccccccCCCCCCCC Q lcl|Aclame:pro 393 LYANSALQPLGATPDGAVEGEEAP 416 (518) Q Consensus 393 ~~~~~n~~~~~~~~~~~~~~~~~~ 416 (518) +++++|++|++..+....+.++.. T Consensus 401 ~~~~~n~~~l~~~~~~~~~~~n~a 424 (424) T protein:vir:18 401 AMRQAQYVPITDLGTNKEPRNNGA 424 (424) T ss_pred eeeccCccchhhhhccCCccccCC Confidence 999999999987554321111110 No 21 >protein:vir:483 Length: 413 # NCBI annotation: putative portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:11 # MgeName: P27 # Cross-refs: genbank:acc:NP_543090;swissprot:trembl:q8w629;genbank:gi:18249902;uniprot:Q8W629;genbank:GeneID:929685 Probab=100.00 E-value=2.2e-94 Score=534.00 Aligned_cols=407 Identities=22% Similarity=0.320 Sum_probs=341.9 Q ss_pred CCC----CCCCCCccccccccchhhhhhhccCccCCcccCccchhhHHHHhhhHHHHHHHHHHHHhhccCceEEEEecCC Q lcl|Aclame:pro 1 MLL----ANGQTLSAPAMAELSPQMQDSYYYAPAVGMQLERQFSLYGGIYKNQPWVRTVIAKRAQALARLPVKCMFTSGD 76 (518) Q Consensus 1 ~~f----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~v~~ia~~ia~lp~~v~~~~~~ 76 (518) |+| +|+...+..+ ...+.+.+++... ......++.+.++++++|++||++||++||++|+++++.+++ T Consensus 1 ~~f~~~f~r~~~~~~~~----~~~~~~~~~~~~~----~~~g~~v~~~~~l~~~~v~~~i~~Ia~~iA~~p~~~~~~~~~ 72 (413) T protein:vir:48 1 MFFSGLFQRKSDAPVTT----PAELAEAIGLSYD----TYTGKRISSQRAMRLTAVYSCVRVLAESVGMLPCSLYKISGT 72 (413) T ss_pred CccchhhccCccCCccc----hHHHHHhhhcCcc----cccCceechhhhhccHHHHHHHHHHHHhhhhCceEEEEecCC Confidence 554 4433322211 2233333433221 111123445778999999999999999999999999998877 Q ss_pred ceeee-cchHHHHHhhccCccCCHHHHHHHHHHHHHHcCCeeEEeeeCCCCceeeeeeeCCcceEEEeccCcceEEEEee Q lcl|Aclame:pro 77 TETEE-HDTGYAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQKNKSGTPEKLMPMHPSRVAIKRNSRTGRYEYYFQ 155 (518) Q Consensus 77 ~~~~~-~~~~~~~l~~~PN~~~t~~~f~~~~~~~~ll~G~~~~~i~~~~~G~~~~l~~l~p~~v~~~~~~~~~~~~~~~~ 155 (518) +.... +|+.+++|+.+||++||+++||+.++.+++++||+|++++++ .|++++|||++|++|++..+.++. ..|.+. T Consensus 73 ~~~~~~~~~~~~lL~~~PN~~~t~~~f~~~~~~~lll~Gn~~~~i~~~-~g~~~~L~~l~~~~v~~~~~~~~~-~~y~~~ 150 (413) T protein:vir:48 73 LKTRVVDERLHKLVSAKPNGYMTPQEFWELVIVCLCLRGNFYAYKVKA-LGEVVELLPIDPGCVEPKLNSQWQ-PVYQVT 150 (413) T ss_pred cceeecccHHHHHHHhhccCCCCHHHHHHHHHHHHhhcCceEEEEEeC-CCcEEEEEEEcCceEEEEEcCCce-EEEEEE Confidence 76554 555666777899999999999999999999999999999886 689999999999999999886654 445544 Q ss_pred ccCCCCceeEEEeeeeeEEeecCCCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHccCCcceeeeeCCcCCHHHHHHH Q lcl|Aclame:pro 156 AGAGVGTQLVSFADDEVVPIRFFNPDGLERGLSLMESLKSTIFSEDSSRNATAAMWKNAGRPNLVLRHEKRLSPEAQQRL 235 (518) Q Consensus 156 ~~~~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~p~gil~~~~~~~~e~~~~~ 235 (518) .. .+..+.|++++|||+++++.++ ++|+||+..+..+|+...++++++.++|+||++|+|+|++++.+++++.+++ T Consensus 151 ~~---~g~~~~~~~~evih~~~~~~d~-~~G~s~i~~~~~~i~~~~~~~~~~~~~~~ng~~p~gil~~~~~~~~e~~~~~ 226 (413) T protein:vir:48 151 FP---DGSVDVLTQDEIWHVRTLTLDG-LVGLNPIAYAREAISLAAATEEHGARLFGNGAVTSGVLRTEQKLTPDAYERL 226 (413) T ss_pred ec---CceEEEEccccEEEecCcCCCC-cccccHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEeCCCCCHHHHHHH Confidence 32 3456789999999999988765 6899999999999999999999999999999999999999999999999999 Q ss_pred HHHHHHHhcCccccccceeccCCcccccccCChhhHHHHHHHHHHHHHHHHHhccchHhhccccccccccHHHHHHHHHH Q lcl|Aclame:pro 236 REQFDRAHAGSSNTGKTMVVEEGMEPIPLQLTAVEMQFIEARQLNREEVCGVYDIAPPIVHILDRATFSNISAQMRAFYR 315 (518) Q Consensus 236 ~~~~~~~~~g~~n~g~~~vl~~g~~~~~~~~~~~d~q~~e~~~~~~~~Ia~~fgVpp~~lg~~~~~~~s~~e~~~~~~~~ 315 (518) ++.|++.++|..|+|+++|+++|++|++++.++.|+||+|.+++++++||++|||||++||+.++++++|.+++.+.|++ T Consensus 227 ~~~~~~~~~g~~n~g~~~vl~~g~~~~~l~~~~~d~q~~e~~~~~~~~Ia~~fgVPp~~lg~~~~~t~~n~e~~~~~f~~ 306 (413) T protein:vir:48 227 KKDFEERHTGLGNAHRPMILEMGLDWKSMALNAEDSQFLETRKFQLEEICRLFRVPLHMVQNTDRATFNNIEELGLGFIN 306 (413) T ss_pred HHHHHHHhcCccccCcceecCCCceEEeccCChhHHHHHHHHHHHHHHHHHHhCCCHHHhCCCcCCCcccHHHHHHHHHH Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred HHHHHHHHHHHHHHHhhhcchhhc-cceeeechhhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHHhCCCCCCccCceee Q lcl|Aclame:pro 316 DTMAIPIARIQSAMDKYVGQYWVR-KNRMKFDIDDVIQPDWEAKSESTQKMVNSGVATPNEGREIMGLPRSDDPKADELY 394 (518) Q Consensus 316 ~~l~P~~~~ie~~ln~~l~~~~~~-~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~T~NE~R~~~g~~pi~~~~gD~~~ 394 (518) +||.|++++||++||++|+++..+ +++++||++.+++.|.+++++.+++++++|++|+||+|+++|+||++ |||+++ T Consensus 307 ~~i~P~~~~ie~~l~~~L~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~T~NE~R~~~g~~p~~--ggD~~~ 384 (413) T protein:vir:48 307 YSLVPYLTRIEQRINTGLVRESKQGKFYAKFNAGALLRGDMKSRFEAYATGINWGIYSPNDCRDLEDMNPRP--GGDVYL 384 (413) T ss_pred HHHHHHHHHHHHHHHhhccCccccCCeEEEEechhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCC--Ccceee Confidence 999999999999999999976543 67899999999999999999999999999999999999999999996 899999 Q ss_pred ecccccccccccccCCCCCCCCCCCCccc Q lcl|Aclame:pro 395 ANSALQPLGATPDGAVEGEEAPAPKRPAS 423 (518) Q Consensus 395 ~~~n~~~~~~~~~~~~~~~~~~~~~~~~~ 423 (518) +|+|++++....+.....+..+...++++ T Consensus 385 ~~~n~~~~~~~~~~~~~~~~~~~~~~~~~ 413 (413) T protein:vir:48 385 TPMNMTTSPSAGDDNGKKKESGDADKTAS 413 (413) T ss_pred ccccccccccccccCCCCCCCCCccccCC Confidence 99999887765433222211111111111 No 22 >protein:vir:81152 Length: 411 # NCBI annotation: putative portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:1892 # MgeName: Geobacillus virus E2 # Cross-refs: genbank:acc:YP_001285809;genbank:gi:148747730;genbank:GeneID:5247195 Probab=100.00 E-value=1.7e-94 Score=534.63 Aligned_cols=398 Identities=21% Similarity=0.297 Sum_probs=340.9 Q ss_pred CCCCCCCCCccccccccchhhhhhhccCccCCcccCccchhhHHHHhhhHHHHHHHHHHHHhhccCceEEEEecCCceee Q lcl|Aclame:pro 1 MLLANGQTLSAPAMAELSPQMQDSYYYAPAVGMQLERQFSLYGGIYKNQPWVRTVIAKRAQALARLPVKCMFTSGDTETE 80 (518) Q Consensus 1 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~v~~ia~~ia~lp~~v~~~~~~~~~~ 80 (518) -+|+... ...+......+++..++++. .+..+.++++++|++||++||++||++|+++|++++++..+ T Consensus 6 ~~~~~~~-~~~~~~~~~~~~~~~~~g~~-----------~~~~~~al~~~~V~~~v~~Ia~~iA~lp~~~~~~~~~~~~~ 73 (411) T protein:vir:81 6 RLTRFFR-PRNETVDMTNPLLLQWLGVD-----------PDTPRNQLSEATYFACLKILSESLGKLPLKMYQKTERGIVK 73 (411) T ss_pred HHHhhcc-CcccccccchHHHHHHhcCc-----------ccChhhhhccHHHHHHHHHHHHhHhhCceeEEEecCCceee Confidence 1212111 11122233344444333321 12345678999999999999999999999999998877655 Q ss_pred e-cchHHHHHhhccCccCCHHHHHHHHHHHHHHcCCeeEEeeeCCCCceeeeeeeCCcceEEEeccCcc-----eEEEEe Q lcl|Aclame:pro 81 E-HDTGYAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQKNKSGTPEKLMPMHPSRVAIKRNSRTG-----RYEYYF 154 (518) Q Consensus 81 ~-~~~~~~~l~~~PN~~~t~~~f~~~~~~~~ll~G~~~~~i~~~~~G~~~~l~~l~p~~v~~~~~~~~~-----~~~~~~ 154 (518) . +|+.+++|+.+||++||+++||+.++.+++++||+|++++++ .|++.+|||++|+.|++..+..+. ..+|.| T Consensus 74 ~~~~~l~~lL~~~PN~~~t~~~f~~~l~~~lll~Gna~~~i~r~-~g~~~~l~~l~~~~v~~~~~~~~~~~~~~~~~~~~ 152 (411) T protein:vir:81 74 SDREELYNLLKLRPNPYMTSSVFWSTVEMNRNHYGNAYVWCQYS-GPQLQALWILPSQYVTIVVDDRGLLGEKNAIWYRY 152 (411) T ss_pred ecccHHHHHHhhccCCCCCHHHHHHHHHHHHhhcCCeEEEEEec-CCceEEEEEECCceEEEEEcCcccccccceEEEEE Confidence 4 455566677799999999999999999999999999999998 689999999999999999876542 233333 Q ss_pred eccCCCCceeEEEeeeeeEEeecCCCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHccCCcceeeeeCCcCCHHHHHH Q lcl|Aclame:pro 155 QAGAGVGTQLVSFADDEVVPIRFFNPDGLERGLSLMESLKSTIFSEDSSRNATAAMWKNAGRPNLVLRHEKRLSPEAQQR 234 (518) Q Consensus 155 ~~~~~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~p~gil~~~~~~~~e~~~~ 234 (518) ....++..+.|++++|||||++.+.+.++|+||+..+..++....+++++..++|+||++|+|+|++++.+++++.++ T Consensus 153 --~~~~~g~~~~~~~~eiih~k~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~f~ng~~p~gil~~~~~l~~e~~~~ 230 (411) T protein:vir:81 153 --NDPYDGKMYVFRNDEILHFKTSVTFDGITGLSVRDVLKHTVDGALESQKFMNNLYKTGLTGKAVLEYTGDLNQEARDR 230 (411) T ss_pred --EecCCceEEEEccccEEEEcCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEeCCCCCHHHHHH Confidence 334456778899999999998766667899999999999999999999999999999999999999999999999999 Q ss_pred HHHHHHHHhcCccccccceeccCCcccccccCChhhHHHHHHHHHHHHHHHHHhccchHhhccccccccccHHHHHHHHH Q lcl|Aclame:pro 235 LREQFDRAHAGSSNTGKTMVVEEGMEPIPLQLTAVEMQFIEARQLNREEVCGVYDIAPPIVHILDRATFSNISAQMRAFY 314 (518) Q Consensus 235 ~~~~~~~~~~g~~n~g~~~vl~~g~~~~~~~~~~~d~q~~e~~~~~~~~Ia~~fgVpp~~lg~~~~~~~s~~e~~~~~~~ 314 (518) +++.|.+.++|.+|+|+++++++|++|+++++++.|+||+|++++++++||++|||||++||+.+.++++|++++.+.|+ T Consensus 231 ~~~~~~~~~~g~~n~g~~~vl~~g~~~~~l~~~~~d~q~~e~~~~~~~~Ia~~fgVPp~~lg~~~~~t~~n~e~~~~~f~ 310 (411) T protein:vir:81 231 LVKGFEQFANGSKNAGKIIPVPLGMKLVPLDIKLTDSQFFELKKYTALQIAAAFGIKPNQINDYEKSSYASAEAQNLAFY 310 (411) T ss_pred HHHHHHHHhcCccccCCceecCCCceEEEccCCHHHHHHHHHHHHHHHHHHHHhCCCHHHhCCCCCCCchhHHHHHHHHH Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred HHHHHHHHHHHHHHHHhhhcchhh--ccceeeechhhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHHhCCCCCCccCce Q lcl|Aclame:pro 315 RDTMAIPIARIQSAMDKYVGQYWV--RKNRMKFDIDDVIQPDWEAKSESTQKMVNSGVATPNEGREIMGLPRSDDPKADE 392 (518) Q Consensus 315 ~~~l~P~~~~ie~~ln~~l~~~~~--~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~T~NE~R~~~g~~pi~~~~gD~ 392 (518) ++||.|++++||++||++|++... .+++++||++.+++.|.+++++.+++++++|++|+||+|+++|+||++ |||+ T Consensus 311 ~~~l~P~~~~ie~~l~~~ll~~~~~~~~~~~~fd~~~ll~~d~~~~~~~~~~~~~~g~~t~NE~R~~~gl~p~~--ggD~ 388 (411) T protein:vir:81 311 VDTLLYVLKQYEEEITYKILSNDLISQGHYFKFNVNVILRADIKTQMDSLSTAVQNGIMTPNEARDYLDMPADD--YGNN 388 (411) T ss_pred HHHHHHHHHHHHHHHHhhcCChhhcCCCcEEEeechhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCC--CCCe Confidence 999999999999999999997644 468899999999999999999999999999999999999999999996 8999 Q ss_pred eeecccccccccccccCCCCCCC Q lcl|Aclame:pro 393 LYANSALQPLGATPDGAVEGEEA 415 (518) Q Consensus 393 ~~~~~n~~~~~~~~~~~~~~~~~ 415 (518) +++++|++|++...++..++.++ T Consensus 389 ~~~~~n~~pl~~~~~~~~kgGd~ 411 (411) T protein:vir:81 389 LMANGNYIPLSMLGANYGKGGDS 411 (411) T ss_pred eeeccCccchhhhhhhhccCCCC Confidence 99999999998765443322222 No 23 >protein:vir:5737 Length: 419 # NCBI annotation: portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:122 # MgeName: PY54 # Cross-refs: genbank:acc:NP_892048;genbank:gi:33770511;goa:Q7Y412;interpro:IPR006427;interpro:IPR006944;uniprot:Q7Y412;genbank:GeneID:1732929;interpro:IPR010994 Probab=100.00 E-value=2.2e-94 Score=534.00 Aligned_cols=411 Identities=17% Similarity=0.153 Sum_probs=337.5 Q ss_pred CCCCCCC-CCccccccccchhhhhhhccCccCCcccCccchhhHHHHhhhHHHHHHHHHHHHhhccCceEEEEecCCcee Q lcl|Aclame:pro 1 MLLANGQ-TLSAPAMAELSPQMQDSYYYAPAVGMQLERQFSLYGGIYKNQPWVRTVIAKRAQALARLPVKCMFTSGDTET 79 (518) Q Consensus 1 ~~f~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~v~~ia~~ia~lp~~v~~~~~~~~~ 79 (518) |.|.+-- ..+..+..........+.+..... ...++.+.++++++|++||++||++||+||+++|++++++.+ T Consensus 1 m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------g~~v~~~~al~~~~v~~~i~~ia~~ia~lp~~~~~~~~~g~~ 74 (419) T protein:vir:57 1 MFIPQFWKGRPSENRVNWQVVPGGMRSSSSQA------GVIITPETALALSAVRACVTLLAESVAQLPCVLYRRTENGGR 74 (419) T ss_pred CcchhhhccCCccccccccccccccccccccC------CceechHHhhccHHHHHHHHHHHHhhccCceEEEEEcCCCce Confidence 7666532 122222222211111222222222 234456778999999999999999999999999998877643 Q ss_pred e--ecchHHHHHhhccCccCCHHHHHHHHHHHHHHcCCeeEEeeeCCCCceeeeeeeCCcceEEEeccCcceEEEEeecc Q lcl|Aclame:pro 80 E--EHDTGYAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQKNKSGTPEKLMPMHPSRVAIKRNSRTGRYEYYFQAG 157 (518) Q Consensus 80 ~--~~~~~~~~l~~~PN~~~t~~~f~~~~~~~~ll~G~~~~~i~~~~~G~~~~l~~l~p~~v~~~~~~~~~~~~~~~~~~ 157 (518) + .+|+.+++|+.+||++||+++||+.++.+++++||+|++|+++.+|++++|||++|.+|++..+.++ ..+|.+... T Consensus 75 ~~~~~~~l~~lL~~~PN~~~t~~~f~~~~~~~l~l~Gna~~~i~r~~~G~~~~L~pl~~~~v~v~~~~~g-~~~y~~~~~ 153 (419) T protein:vir:57 75 EIAFDHPLHDLIRYQPNRKDTAFEYHEQTQGVLGLEGNSYSLIDRNGRGDITELIPINPHKVIVLKGPDG-MPYYDIPSI 153 (419) T ss_pred eccccchHHHHHhhccccCCCHHHHHHHHHHHHhhcCCeEEEEEECCCCcEEEEEEEcCcceEEEECCCc-eEEEEEcCC Confidence 3 3455566677899999999999999999999999999999999999999999999999999887664 455655322 Q ss_pred CCCCceeEEEeeeeeEEeecCCCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHccCCcceeeeeCC----cCCHHHHH Q lcl|Aclame:pro 158 AGVGTQLVSFADDEVVPIRFFNPDGLERGLSLMESLKSTIFSEDSSRNATAAMWKNAGRPNLVLRHEK----RLSPEAQQ 233 (518) Q Consensus 158 ~~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~p~gil~~~~----~~~~e~~~ 233 (518) ...++.++|||+++++.++ ++|+||+..+...|....++++++.++|+||++|+|+|+.+. .+++++++ T Consensus 154 ------~~~~~~~~vih~r~~~~d~-~~G~s~i~~~~~~i~~~~~~~~~~~~~f~ng~~p~gil~~~~~~~~~~~~e~~~ 226 (419) T protein:vir:57 154 ------GEILPMRMVHHIKSFSLDG-YIGTSPIQTNPDVLGLGIAVEQHAAQVFARGTTMSGVIERPFEAKAIASQAAVD 226 (419) T ss_pred ------ceEEchhhEEEecCcCCCC-cccccHHHHHHHHHHHHHHHHHHHHHHHHccCCccEEEEecCcCCcccCHHHHH Confidence 1358999999999987765 789999999999999999999999999999999999999864 46889999 Q ss_pred HHHHHHHHHhcCccccccceeccCCcccccccCChhhHHHHHHHHHHHHHHHHHhccchHhhccccccccccHHHHHHHH Q lcl|Aclame:pro 234 RLREQFDRAHAGSSNTGKTMVVEEGMEPIPLQLTAVEMQFIEARQLNREEVCGVYDIAPPIVHILDRATFSNISAQMRAF 313 (518) Q Consensus 234 ~~~~~~~~~~~g~~n~g~~~vl~~g~~~~~~~~~~~d~q~~e~~~~~~~~Ia~~fgVpp~~lg~~~~~~~s~~e~~~~~~ 313 (518) ++++.|.+.++|.+|+|+++++++|++|++++.+++|+||+|++++++++||++|||||.+||+.++++++|+|++.+.| T Consensus 227 ~~~~~~~~~~~g~~nag~~~vl~~g~~~~~l~~~~~d~q~~e~~~~~~~~Ia~~fgVPp~~lg~~~~~t~sn~e~~~~~f 306 (419) T protein:vir:57 227 AILAKWTERYGGVRNAFSVGMLQEGMTYKQLSQDNEKAQLLQSRQYTVNEVCRLYKVPPHMIQDLQKSTNNNIEHQGLQY 306 (419) T ss_pred HHHHHHHHHhccccccccceecCCCceEEEcCCChhhHHHHHHHHHHHHHHHHHhCCCHHHhCCCCCCccccHHHHHHHH Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred HHHHHHHHHHHHHHHHHhhhcchhh-ccceeeechhhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHHhCCCCCCccCce Q lcl|Aclame:pro 314 YRDTMAIPIARIQSAMDKYVGQYWV-RKNRMKFDIDDVIQPDWEAKSESTQKMVNSGVATPNEGREIMGLPRSDDPKADE 392 (518) Q Consensus 314 ~~~~l~P~~~~ie~~ln~~l~~~~~-~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~T~NE~R~~~g~~pi~~~~gD~ 392 (518) +++||+|++++||++||++|++..+ .+++++||++.++++|.+++++.+++++++|++|+||+|+++|+||++ |||+ T Consensus 307 ~~~~l~P~~~~ie~~l~~~ll~~~~~~~~~i~fd~~~ll~~d~~~~~~~~~~~~~~G~~T~NE~R~~~gl~p~~--ggD~ 384 (419) T protein:vir:57 307 VIYTMLAILKRHESAMMRDLLLPSERRDFYIEFNVSSLLRGDQKSRYESYALGRQWGWLSVNDIRRMENLTPIP--GGDK 384 (419) T ss_pred HHHHHHHHHHHHHHHHHhhccCccccCCeEEEEechhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCC--CcCe Confidence 9999999999999999999987544 467899999999999999999999999999999999999999999996 8999 Q ss_pred eeecccccccccccccCCCCCCCCCCCCcccCCCCCccCCccc Q lcl|Aclame:pro 393 LYANSALQPLGATPDGAVEGEEAPAPKRPASTPVASLDQSPPA 435 (518) Q Consensus 393 ~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 435 (518) +++|+|+++++...++... .++++. ..+......+ T Consensus 385 ~~~~~n~~~~~~~~~~~~~-----~~~~~~---~~~~~~~~~~ 419 (419) T protein:vir:57 385 YLTPLNMVDSKALTGIGKA-----TPQQLK---DIEAILCTRN 419 (419) T ss_pred eeeccccccccccccccCC-----CcccCc---chhhhhhccC Confidence 9999999887655443211 111110 0000000000 No 24 >protein:vir:10362 Length: 432 # NCBI annotation: head portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:183 # MgeName: Xp10 # Cross-refs: genbank:acc:NP_858954;genbank:gi:32128419;genbank:GeneID:2648396 Probab=100.00 E-value=2.8e-94 Score=533.50 Aligned_cols=411 Identities=22% Similarity=0.315 Sum_probs=330.9 Q ss_pred CCCCCCCCCcccccc---------ccchhhhhhhccCccCCcccCccchhhHHHHhhhHHHHHHHHHHHHhhccCceEEE Q lcl|Aclame:pro 1 MLLANGQTLSAPAMA---------ELSPQMQDSYYYAPAVGMQLERQFSLYGGIYKNQPWVRTVIAKRAQALARLPVKCM 71 (518) Q Consensus 1 ~~f~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~v~~ia~~ia~lp~~v~ 71 (518) +||++-++.-.+..+ ...++....+++. .......++.+.++++++|++||++||++||+|||++| T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~s~~g~~v~~~~al~~~~V~~~i~~Ia~~ia~lp~~~y 82 (432) T protein:vir:10 8 GLLGQLKAMFVPPDPVDIGGGQTFTPVNATARDLGII-----ISDTGAAVNADAIMRLDAVAACVKLVSQAIAAMPLTMY 82 (432) T ss_pred chhhhhHhhcCCccccccccccccccCcchhhhhccc-----ccccCcccchhhhhcchHHHHHHHHHHHhhhhCceeEE Confidence 555553322222110 0111111111111 11223445667899999999999999999999999999 Q ss_pred EecCCceee-ecchHHHHHhhccCccCCHHHHHHHHHHHHHHcCCeeEEeeeCCCCceeeeeeeCCcceEEEeccCcceE Q lcl|Aclame:pro 72 FTSGDTETE-EHDTGYAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQKNKSGTPEKLMPMHPSRVAIKRNSRTGRY 150 (518) Q Consensus 72 ~~~~~~~~~-~~~~~~~~l~~~PN~~~t~~~f~~~~~~~~ll~G~~~~~i~~~~~G~~~~l~~l~p~~v~~~~~~~~~~~ 150 (518) +++.++..+ .+|+.+++|+.+||++||+++||+.++.+++++||+|++++++ +|++.+|||++|++|++..+.++ .. T Consensus 83 ~~~~~g~~~~~~~~l~~lL~~~PN~~~t~~~f~~~l~~~lll~Gnay~~~~~~-~g~~~~L~~l~~~~v~v~~~~~g-~~ 160 (432) T protein:vir:10 83 MRTPDGRKEAVNHPLYTLLLDGPNSTQTAFDFWQVVVTRLLLDGTAYVRKVVT-DGRIESLQYLANDRLTITTDTKG-NT 160 (432) T ss_pred EecCCCcccccccHHHHHHHhcccccCCHHHHHHHHHHHHhhcCCeEEEEEec-CCcEEEEEEEcCCceEEEEcCCC-cE Confidence 988777554 5566667777899999999999999999999999999999987 68999999999999999987765 45 Q ss_pred EEEeeccCCCCceeEEEeeeeeEEeecCCCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHccCCcceeeeeCCcCCHH Q lcl|Aclame:pro 151 EYYFQAGAGVGTQLVSFADDEVVPIRFFNPDGLERGLSLMESLKSTIFSEDSSRNATAAMWKNAGRPNLVLRHEKRLSPE 230 (518) Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~p~gil~~~~~~~~e 230 (518) .|.+... +++.+.|++++|||+++++.++ ++|+||+..+...|+.+.+++++..++|+||++|++|+++++.++++ T Consensus 161 ~y~~~~~---~g~~~~~~~~~iih~~~~~~dg-~~G~spi~~~~~~i~~~~~~~~~~~~~f~ng~~~~gil~~~~~l~~e 236 (432) T protein:vir:10 161 AYRYRRT---DGQMIDIPKQQIWKIMGYSLDG-ENGLSAIRYGAQIFGTAIAAEAQAARAFRNGQLQSVYYQIDRFLTDD 236 (432) T ss_pred EEEEEec---CceEEEEcCccEEEecCCCCCC-cccccHHHHHHHHHHHHHHHHHHHHHHHhcCCCcceEEecCCCCCHH Confidence 5555432 4567889999999999987766 68999999999999999999999999999999999999999999999 Q ss_pred HHHHHHHHHHHHhcCccccccceeccCCcccccccCChhhHHHHHHHHHHHHHHHHHhccchHhhccccccc---cccHH Q lcl|Aclame:pro 231 AQQRLREQFDRAHAGSSNTGKTMVVEEGMEPIPLQLTAVEMQFIEARQLNREEVCGVYDIAPPIVHILDRAT---FSNIS 307 (518) Q Consensus 231 ~~~~~~~~~~~~~~g~~n~g~~~vl~~g~~~~~~~~~~~d~q~~e~~~~~~~~Ia~~fgVpp~~lg~~~~~~---~s~~e 307 (518) +++++++.|. |..|+|+++||++|++|++++++++|+||+|++++++++||++|||||++||+.+.++ ++|+| T Consensus 237 ~~~~~~~~~~----~~~nag~~~vl~~g~~~~~l~~~~~d~q~le~~~~~~~~Ia~afgVPp~~lg~~~~~t~~~~sn~e 312 (432) T protein:vir:10 237 QYDSFAKKVS----GSVEAGRAPLLEGGMDVKSLGLNPVDAQLLQSRQYSVESICRFFGVPPSMIGHSSAGTTSWGSGIE 312 (432) T ss_pred HHHHHHHHHh----hhhhCCCceecCCCceEEEccCChHHHHHHHHHHHHHHHHHHHhCCCHHHcCCccCCcccccchHH Confidence 9888777664 5678999999999999999999999999999999999999999999999999876544 48899 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhcchhh-ccceeeechhhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHHhCCCCC Q lcl|Aclame:pro 308 AQMRAFYRDTMAIPIARIQSAMDKYVGQYWV-RKNRMKFDIDDVIQPDWEAKSESTQKMVNSGVATPNEGREIMGLPRSD 386 (518) Q Consensus 308 ~~~~~~~~~~l~P~~~~ie~~ln~~l~~~~~-~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~T~NE~R~~~g~~pi~ 386 (518) ++.+.|+++||.||+++||++||++|++..+ ..++++||.+.++++|.+++++.+++++++|+||+||+|+++||||++ T Consensus 313 ~~~~~f~~~tl~P~~~~ie~~ln~kL~~~~~~~~~~~~fd~~~ll~~d~~~r~~~~~~~~~~G~~T~NE~R~~~glppi~ 392 (432) T protein:vir:10 313 SQQLGFLSMTLSPWLRRIEQSIALNLLSPAERRRYFADFDTSALLRADSAARSSYYSQLVNNGLMTRDEAREIEGLPKLG 392 (432) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhcCccccCceEEEeechhhhccCHHHHHHHHHHHHhCCCCCHHHHHHHhCCCCCC Confidence 9999999999999999999999999997654 457899999999999999999999999999999999999999999997 Q ss_pred CccCceeeecccccccccccccCCCCCCCCCCCCcccCCCCCccCCcccc Q lcl|Aclame:pro 387 DPKADELYANSALQPLGATPDGAVEGEEAPAPKRPASTPVASLDQSPPAS 436 (518) Q Consensus 387 ~~~gD~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 436 (518) + +++.++++.+++|++........ + +.. ...+++++...+ T Consensus 393 g-~~~~~~~~~~~~pl~~~~~~~~~-----~---~~~-~~~~~~~~~~~~ 432 (432) T protein:vir:10 393 G-NAAVLTVQSAMVPLDSIGLQASP-----E---PAS-GLGNQQQDKVSK 432 (432) T ss_pred C-CcceEeecCcccchhhhcccCCC-----C---CCC-CCCCcccccccC Confidence 3 44566789999998876432211 1 100 001111110000 No 25 >protein:vir:100150 Length: 437 # NCBI annotation: gp3 # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:1639 # MgeName: phi1026b # Cross-refs: genbank:acc:NP_945033;genbank:gi:38707893;genbank:GeneID:2744197 Probab=100.00 E-value=3.9e-94 Score=532.70 Aligned_cols=422 Identities=20% Similarity=0.293 Sum_probs=336.4 Q ss_pred CCCCCCCCCccc----cccccchhhhhhhccCccCCcccCccchhhHHHHhhhHHHHHHHHHHHHhhccCceEEEEecCC Q lcl|Aclame:pro 1 MLLANGQTLSAP----AMAELSPQMQDSYYYAPAVGMQLERQFSLYGGIYKNQPWVRTVIAKRAQALARLPVKCMFTSGD 76 (518) Q Consensus 1 ~~f~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~v~~ia~~ia~lp~~v~~~~~~ 76 (518) -+|++-.++-.. ......+++.+.+++.. ......+..+.++++++|++||++||++||+|||++|+++.+ T Consensus 7 ~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~~~-----~~~g~~v~~~~al~~~~v~~ci~~Ia~~ia~lp~~~~~~~~~ 81 (437) T protein:vir:10 7 RALGRIKSSFLKWLGVPISLTDGSFWSAWGGMG-----SSSGETVTADSALQLSAVWSCVRLIAETIATLPLNLYQTKPD 81 (437) T ss_pred hhhhhhHHhhhhhcCCcccCCchhHHHhhcccc-----cCCCceechHhhhccHHHHHHHHHHHHHHhhCceeEEEEcCC Confidence 222221111111 11112233333332211 122234556788999999999999999999999999998766 Q ss_pred cee--eecchHHHHHhhccCccCCHHHHHHHHHHHHHHcCCeeEEeeeCCCCceeeeeeeCCcceEEEeccCcceEEEEe Q lcl|Aclame:pro 77 TET--EEHDTGYAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQKNKSGTPEKLMPMHPSRVAIKRNSRTGRYEYYF 154 (518) Q Consensus 77 ~~~--~~~~~~~~~l~~~PN~~~t~~~f~~~~~~~~ll~G~~~~~i~~~~~G~~~~l~~l~p~~v~~~~~~~~~~~~~~~ 154 (518) +.+ ..+|+.+++|+.+||++||+++||+.++.+++++||+|++|+++ .|++++|||++|.+|++..+.++ ...|.| T Consensus 82 g~~~~~~~~~l~~lL~~~PN~~~t~~~f~~~~~~~lll~Gnay~~i~r~-~g~~~~L~~l~p~~v~i~~~~~g-~~~y~~ 159 (437) T protein:vir:10 82 GTRVLAKQHRLYTVIHSQPNAENTAAEFWEVIVASMLLWGNGYARKLRS-AGVLIGLELMLPQRTTVKRLTSG-ALQYTY 159 (437) T ss_pred CceeeccccHHHHHhhccCCcCCCHHHHHHHHHHHHhhcCCeEEEEEec-CCcEEEEEEEcCcceEEEECCCC-eEEEEE Confidence 643 34566667777899999999999999999999999999999998 59999999999999999887654 455555 Q ss_pred eccCCCCceeEEEeeeeeEEeecCCCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHccCCcceeeeeCCcCCHHHHHH Q lcl|Aclame:pro 155 QAGAGVGTQLVSFADDEVVPIRFFNPDGLERGLSLMESLKSTIFSEDSSRNATAAMWKNAGRPNLVLRHEKRLSPEAQQR 234 (518) Q Consensus 155 ~~~~~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~p~gil~~~~~~~~e~~~~ 234 (518) ... ++....|++++|||||+++.++ ++|+||+..++.+++...+++++..++|+||++|+|||++++.+++++.++ T Consensus 160 ~~~---~g~~~~~~~~dIih~r~~~~d~-~~G~spi~~~~~~i~~~~~~~~~~~~~f~ng~~p~gil~~~~~l~~e~~~~ 235 (437) T protein:vir:10 160 RNV---DGTVSTLAEDDVFHVRGFSLDG-LMGLTPIQYAREVLGNSTAANKTSASVFRNGLRPSGVLSTDQILQKEKRAE 235 (437) T ss_pred Eec---CceEEEEccccEEEecCcCCCC-cccccHHHHHHHHHHHHHHHHHHHHHHHhccCCccEEEEcCCCCCHHHHHH Confidence 432 3556789999999999988765 789999999999999999999999999999999999999999999999999 Q ss_pred HHHHHHHHhcCccccccceeccCCcccccccCChhhHHHHHHHHHHHHHHHHHhccchHhhccccccc--cccHHHHHHH Q lcl|Aclame:pro 235 LREQFDRAHAGSSNTGKTMVVEEGMEPIPLQLTAVEMQFIEARQLNREEVCGVYDIAPPIVHILDRAT--FSNISAQMRA 312 (518) Q Consensus 235 ~~~~~~~~~~g~~n~g~~~vl~~g~~~~~~~~~~~d~q~~e~~~~~~~~Ia~~fgVpp~~lg~~~~~~--~s~~e~~~~~ 312 (518) +++.|.+.++|..|+|+++|+++|++|+++++++.|+||+|++++++++||++|||||++||+.+.++ ++|++++.+. T Consensus 236 ~~~~~~~~~~g~~nag~~~vl~~g~~~~~l~~~~~d~q~~e~~~~~~~~Ia~~fgVPp~~lg~~~~~t~~~sn~e~~~~~ 315 (437) T protein:vir:10 236 IRTDLAEQFGGAMQAGKTMVLEAGMKYQAITMNPGDVQLLETRAFNIEEICRWYRVPPFMVGHSEKSTSWGTGIEQQTLG 315 (437) T ss_pred HHHHHHHHhcCccccCcceeccCCceEEeccCChhhHHHHHHHHHHHHHHHHHhCCCHHHhCCCCCcccccchHHHHHHH Confidence 99999999999999999999999999999999999999999999999999999999999999887654 4899999999 Q ss_pred HHHHHHHHHHHHHHHHHHhhhcchhhc-cceeeechhhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHHhCCCCCCccCc Q lcl|Aclame:pro 313 FYRDTMAIPIARIQSAMDKYVGQYWVR-KNRMKFDIDDVIQPDWEAKSESTQKMVNSGVATPNEGREIMGLPRSDDPKAD 391 (518) Q Consensus 313 ~~~~~l~P~~~~ie~~ln~~l~~~~~~-~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~T~NE~R~~~g~~pi~~~~gD 391 (518) |+++||+||+..||++|+++|++...+ .++++||++.++++|.+++++.+++++++|+||+||+|+++|+||+++ +++ T Consensus 316 f~~~tl~P~~~~ie~~l~~kll~~~e~~~~~~~fd~~~ll~~d~~~r~~~~~~~~~~G~~T~NE~R~~~gl~pi~g-g~~ 394 (437) T protein:vir:10 316 FLTFTLRPWLTRIEQAARRSLLRPGERDQFYAEFSVEGLLRADSAGRAAFYSTMTQNGLMTRDECRAKENLPPMGG-NAA 394 (437) T ss_pred HHHHHHHHHHHHHHHHHHhhccCccccCceEEEEechhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCC-Ccc Confidence 999999999999999999999976543 468999999999999999999999999999999999999999999972 344 Q ss_pred eeeecccccccccccccCCCCCCCCCCCCcccCCCCCccCCccccccccCh Q lcl|Aclame:pro 392 ELYANSALQPLGATPDGAVEGEEAPAPKRPASTPVASLDQSPPASVPGLSP 442 (518) Q Consensus 392 ~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 442 (518) .++++.|++|++.........+ .+.+........++..++ ++. T Consensus 395 ~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~---~e~ 437 (437) T protein:vir:10 395 VLTVQSALLPIDKLGEHTTATA-----AQDALKAWLYQEEKTRAT---QER 437 (437) T ss_pred eEeecCcccchhhccCcCCCcc-----hhccccccCCCCCCCCcc---ccC Confidence 5668999999876544322111 111100000010111110 000 No 26 >protein:vir:97060 Length: 432 # NCBI annotation: putative head portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:1653 # MgeName: OP1 # Cross-refs: genbank:acc:YP_453563;genbank:gi:84662598;genbank:GeneID:5142475 Probab=100.00 E-value=6.9e-94 Score=531.32 Aligned_cols=410 Identities=21% Similarity=0.316 Sum_probs=330.0 Q ss_pred CCCCCCCCCcccccc---------ccchhhhhhh-ccCccCCcccCccchhhHHHHhhhHHHHHHHHHHHHhhccCceEE Q lcl|Aclame:pro 1 MLLANGQTLSAPAMA---------ELSPQMQDSY-YYAPAVGMQLERQFSLYGGIYKNQPWVRTVIAKRAQALARLPVKC 70 (518) Q Consensus 1 ~~f~~~~~~~~~~~~---------~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~v~~ia~~ia~lp~~v 70 (518) ++|++-.+.-.+..+ ...++....+ ..... ....++.+.++++++|++||++||++||++|+++ T Consensus 8 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~v~~~~a~~~~aV~~~v~~Ia~~ia~lp~~~ 81 (432) T protein:vir:97 8 GLLGQLKAMFVPPDPVDIGGGQTFTPVNATARDLGIIISD------TGAAVNADAIMRLDAVAACVKLVSQAVAAMPLMM 81 (432) T ss_pred chhhhhHhhcCCccccccccccccccCchhhhhhcccccc------cCcccchHhhhcchHHHHHHHHHHHhhccCceEE Confidence 566553332221110 0011111111 11122 2334566789999999999999999999999999 Q ss_pred EEecCCceee-ecchHHHHHhhccCccCCHHHHHHHHHHHHHHcCCeeEEeeeCCCCceeeeeeeCCcceEEEeccCcce Q lcl|Aclame:pro 71 MFTSGDTETE-EHDTGYAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQKNKSGTPEKLMPMHPSRVAIKRNSRTGR 149 (518) Q Consensus 71 ~~~~~~~~~~-~~~~~~~~l~~~PN~~~t~~~f~~~~~~~~ll~G~~~~~i~~~~~G~~~~l~~l~p~~v~~~~~~~~~~ 149 (518) |+++.++..+ .+|+.+++|+.+||++||+++||+.++.+++++||+|++++++ +|++.+|||++|++|++..+.++ . T Consensus 82 y~~~~~g~~~~~~~pl~~lL~~~PN~~~t~~~f~~~l~~~lll~Gnay~~~~~~-~g~~~~L~~l~p~~v~v~~~~~g-~ 159 (432) T protein:vir:97 82 YMRTPDGRKEAVNHPLYTLLLDGPNSTQTAFDFWQVVVTRLLLDGTAYVRKVVT-DGRIESLQYLANDRLTITTDTKG-N 159 (432) T ss_pred EEecCCCcccccccHHHHHHHhcccccCCHHHHHHHHHHHHhhcCCeEEEEEec-CCcEEEEEEEcCcceEEEEcCCC-c Confidence 9988776544 5566667777899999999999999999999999999999997 58999999999999999987665 4 Q ss_pred EEEEeeccCCCCceeEEEeeeeeEEeecCCCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHccCCcceeeeeCCcCCH Q lcl|Aclame:pro 150 YEYYFQAGAGVGTQLVSFADDEVVPIRFFNPDGLERGLSLMESLKSTIFSEDSSRNATAAMWKNAGRPNLVLRHEKRLSP 229 (518) Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~p~gil~~~~~~~~ 229 (518) ..|.+.. .+++.+.|++++|||+|+++.++ ++|+||+..+...++.+.+++++..++|+||++|+||+++++.+++ T Consensus 160 ~~y~~~~---~~g~~~~~~~~~iih~r~~~~dg-~~G~spi~~~~~~i~~~~a~~~~~~~~f~ng~~~~gil~~~~~l~~ 235 (432) T protein:vir:97 160 TAYRYRR---TDGQMIDIPRQQIWKIMGYSLDG-ENGLSAIRYGAQIFGTAIAAEAQAARAFRNGQLQSVYYQIDRFLTD 235 (432) T ss_pred EEEEEEe---cCceEEEEccccEEEecCcCCCC-cccccHHHHHHHHHHHHHHHHHHHHHHHhccCCcceeEecCCCCCH Confidence 5566543 24567889999999999987766 7899999999999999999999999999999999999999999999 Q ss_pred HHHHHHHHHHHHHhcCccccccceeccCCcccccccCChhhHHHHHHHHHHHHHHHHHhccchHhhcccccccc---ccH Q lcl|Aclame:pro 230 EAQQRLREQFDRAHAGSSNTGKTMVVEEGMEPIPLQLTAVEMQFIEARQLNREEVCGVYDIAPPIVHILDRATF---SNI 306 (518) Q Consensus 230 e~~~~~~~~~~~~~~g~~n~g~~~vl~~g~~~~~~~~~~~d~q~~e~~~~~~~~Ia~~fgVpp~~lg~~~~~~~---s~~ 306 (518) ++++++++.| .|..|+|+++||++|++|+++++++.|+||+|++++++++||++|||||++||+.+.+++ +|+ T Consensus 236 e~~~~~~~~~----~~~~nag~~~vl~~g~~~~~l~~~~~d~q~~e~~~~~~~~Ia~~fgVPp~~lg~~~~~t~~~~s~~ 311 (432) T protein:vir:97 236 DQYDSFSKKV----SGSVEAGRAPLLEGGMDVKSLGLNPVDAQLLQSRQYSVESICRFFGVPPSMIGHSSAGTTSWGSGI 311 (432) T ss_pred HHHHHHHHHH----hhhhcCCCceecCCCceEEEccCChhHHHHHHHHHHHHHHHHHHhCCCHHHcCCcCCcccccchhH Confidence 9987766655 566789999999999999999999999999999999999999999999999998766544 889 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhcchhh-ccceeeechhhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHHhCCCC Q lcl|Aclame:pro 307 SAQMRAFYRDTMAIPIARIQSAMDKYVGQYWV-RKNRMKFDIDDVIQPDWEAKSESTQKMVNSGVATPNEGREIMGLPRS 385 (518) Q Consensus 307 e~~~~~~~~~~l~P~~~~ie~~ln~~l~~~~~-~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~T~NE~R~~~g~~pi 385 (518) |++.+.|+++||.||++.||++||++|++... ..++++||++.++++|.+++++.+.+++++|+||+||+|+++|+||+ T Consensus 312 e~~~~~f~~~tl~P~~~~ie~~ln~kLl~~~e~~~~~~~fd~~~llr~d~~~r~~~~~~~~~~G~~T~NE~R~~~glpp~ 391 (432) T protein:vir:97 312 ESQQLGFLTMTLSPWLRRIEQSIALNLLTPAERRRYFADFDTSALLRADSAARSSYYSQLVNNGLMTRDEAREIEGLPKL 391 (432) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhccCccccCceEEEeechhhhccCHHHHHHHHHHHHhCCCCCHHHHHHHhCCCCC Confidence 99999999999999999999999999997654 45789999999999999999999999999999999999999999999 Q ss_pred CCccCceeeecccccccccccccCCCCCCCCCCCCcccCCCCCccCCcccc Q lcl|Aclame:pro 386 DDPKADELYANSALQPLGATPDGAVEGEEAPAPKRPASTPVASLDQSPPAS 436 (518) Q Consensus 386 ~~~~gD~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 436 (518) ++ +++.++++.|++|++........ +++.. ..+++++...+ T Consensus 392 ~g-~~~~~~~~~~~~pl~~~~~~~~~-----~~~~~----~~~~~~~~~~~ 432 (432) T protein:vir:97 392 GG-NAAVLTVQSAMVPLDSIGLQASP-----EPASG----LGNQQQDKVSK 432 (432) T ss_pred CC-CcceEeecccccchhhhcccCCC-----CCCCC----CCCcccccccC Confidence 72 44556689999998876433211 11100 01110000000 No 27 >protein:vir:80333 Length: 419 # NCBI annotation: gp4, phage portal protein, HK97 family # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:1881 # MgeName: phi644-2 # Cross-refs: genbank:acc:YP_001111083;genbank:gi:134288632;genbank:GeneID:4960580 Probab=100.00 E-value=8.1e-94 Score=530.95 Aligned_cols=412 Identities=18% Similarity=0.243 Sum_probs=344.1 Q ss_pred CCCCCCC-CCccccccccchhhhhhhccCccCCcccCccchhhHHHHhhhHHHHHHHHHHHHhhccCceEEEEecCCcee Q lcl|Aclame:pro 1 MLLANGQ-TLSAPAMAELSPQMQDSYYYAPAVGMQLERQFSLYGGIYKNQPWVRTVIAKRAQALARLPVKCMFTSGDTET 79 (518) Q Consensus 1 ~~f~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~v~~ia~~ia~lp~~v~~~~~~~~~ 79 (518) |.|.+.. ....+..+....|+...+++... .....++.+.++++++|++||++||++||++|+++|++++++.. T Consensus 1 m~~~~~~~~~~~~~~~~~~~~~~~~~g~~~s-----~~~~~v~~~~al~~~~v~~cv~~ia~~ia~lp~~~~~~~~~~~~ 75 (419) T protein:vir:80 1 MFFSRQLLSNLGQTQPGSGGWVSALLGSARS-----EAGQVVTPASALSLTVLQNCVTLLAESIAQLPVELYERSGDDRK 75 (419) T ss_pred CCcccccccccCcCCCCcchhhHHhhccccc-----ccCcccChHHhhccHHHHHHHHHHHHhhccCceEEEEecCCCcc Confidence 7777643 23344445567787777654432 12233455778899999999999999999999999998877755 Q ss_pred ee-cchHHHHHhhccCccCCHHHHHHHHHHHHHHcCCeeEEeeeCCCCceeeeeeeCCcceEEEeccCcceEEEEeeccC Q lcl|Aclame:pro 80 EE-HDTGYAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQKNKSGTPEKLMPMHPSRVAIKRNSRTGRYEYYFQAGA 158 (518) Q Consensus 80 ~~-~~~~~~~l~~~PN~~~t~~~f~~~~~~~~ll~G~~~~~i~~~~~G~~~~l~~l~p~~v~~~~~~~~~~~~~~~~~~~ 158 (518) +. +|+.+++|+.+||++||+++||+.++.+++++||+|++++++.+|++++|||++|++|++..+.++. ..|.+.. T Consensus 76 ~~~~~~l~~lL~~~PN~~~t~~~f~~~~~~~l~l~Gna~~~i~r~~~G~~~~L~~i~~~~v~i~~~~~~~-~~y~~~~-- 152 (419) T protein:vir:80 76 PATDHPLYSILKYEPNPWQTPFEYQEQSQVAVGLRGNSYSFIDRDQDGVIQGLYPLDNEAVTVMKGPDLK-PMYRVAG-- 152 (419) T ss_pred cccccHHHHHHHhhcccCCCHHHHHHHHHHHHhhcCCeEEEEEECCCCcEEEEEEecCceEEEEECCCce-EEEEEcC-- Confidence 54 5556667778999999999999999999999999999999999999999999999999999877654 4444422 Q ss_pred CCCceeEEEeeeeeEEeecCCCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHccCCcceeeeeCCcC----CHHHHHH Q lcl|Aclame:pro 159 GVGTQLVSFADDEVVPIRFFNPDGLERGLSLMESLKSTIFSEDSSRNATAAMWKNAGRPNLVLRHEKRL----SPEAQQR 234 (518) Q Consensus 159 ~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~p~gil~~~~~~----~~e~~~~ 234 (518) ...++.++|+|+++++.++ ++|+||+..+...|....+++++..++|+||++|+|+|+++... ++++.++ T Consensus 153 -----~~~~~~~~i~h~~~~~~d~-~~G~s~i~~~~~~i~~~~~~~~~~~~~f~ng~~~~gil~~~~~~~~~~~~~~~~~ 226 (419) T protein:vir:80 153 -----ADPLPQRLVHHVRWMSING-YTGLSPVLLHANAIGHAQAIQQYAGKSFMNGTALSGVIERPTDAPALKDQASVDR 226 (419) T ss_pred -----ccccchhheEEecCCCCCC-cccccHHHHHHHHHHHHHHHHHHHHHHHhcCCCccEEEEecCCCCcccCHHHHHH Confidence 1248899999999987766 68999999999999999999999999999999999999987543 6888999 Q ss_pred HHHHHHHHhcCccccccceeccCCcccccccCChhhHHHHHHHHHHHHHHHHHhccchHhhccccccccccHHHHHHHHH Q lcl|Aclame:pro 235 LREQFDRAHAGSSNTGKTMVVEEGMEPIPLQLTAVEMQFIEARQLNREEVCGVYDIAPPIVHILDRATFSNISAQMRAFY 314 (518) Q Consensus 235 ~~~~~~~~~~g~~n~g~~~vl~~g~~~~~~~~~~~d~q~~e~~~~~~~~Ia~~fgVpp~~lg~~~~~~~s~~e~~~~~~~ 314 (518) +++.|++.++|.+|+|+++++++|++|++++.++.|+||+|.+++++++||++|||||.++|+.++++++|.|++.+.|+ T Consensus 227 ~~~~~~~~~~g~~n~g~~~vl~~g~~~~~l~~s~~d~q~~e~~~~~~~~Ia~~fgVPp~llg~~~~~t~~n~e~~~~~f~ 306 (419) T protein:vir:80 227 ITDGWNAKFGGSGNAKKVALLQEGMKFKPLSMTNVDAALIDALRLSALDIARIYKIPAHMVNELERATFSNIEHQSLQFV 306 (419) T ss_pred HHHHHHHHhcCccccCCceecCCCceEEeccCChhhHHHHHHHHHHHHHHHHHhCCCHHHhcCCCCCCcccHHHHHHHHH Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred HHHHHHHHHHHHHHHHhhhcchhh-ccceeeechhhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHHhCCCCCCccCcee Q lcl|Aclame:pro 315 RDTMAIPIARIQSAMDKYVGQYWV-RKNRMKFDIDDVIQPDWEAKSESTQKMVNSGVATPNEGREIMGLPRSDDPKADEL 393 (518) Q Consensus 315 ~~~l~P~~~~ie~~ln~~l~~~~~-~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~T~NE~R~~~g~~pi~~~~gD~~ 393 (518) ++||.|++.+||++||++|++... ..++++||++.++++|.+++++.+++++++|++|+||+|+++|+||++ |||++ T Consensus 307 ~~~l~P~~~~ie~~l~~kll~~~~~~~~~i~fd~~~l~~~d~~~~~~~~~~~~~~G~~T~NE~R~~~g~~p~~--gGD~~ 384 (419) T protein:vir:80 307 IYTLLPWVKRHEQAKTRDLLLPSERKQYFIEYNLAGLLRGDQSSRYAAYAVGRQWGWLSINDIRRLENMPPVK--GGDIY 384 (419) T ss_pred HHHHHHHHHHHHHHHhhhccCccccCCeEEEEechhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCC--Cccee Confidence 999999999999999999987543 467899999999999999999999999999999999999999999996 89999 Q ss_pred eecccccccccccccCCCCCCCCCCCCcccCCCCCccCCccccccccChhhhcchhHHHHHHHHHHhh Q lcl|Aclame:pro 394 YANSALQPLGATPDGAVEGEEAPAPKRPASTPVASLDQSPPASVPGLSPTNSDRSTDSGKTEPRRLMQ 461 (518) Q Consensus 394 ~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 461 (518) ++|+|+++++........ ++ ++. .....+.++..+ T Consensus 385 ~~~~n~~~~~~~~~~~~~-~~-----~~~---------------------------~~~~~~~~~~l~ 419 (419) T protein:vir:80 385 LSPMNMVDASKPQPIPMG-KT-----EPT---------------------------KAALDEIGRILS 419 (419) T ss_pred eeccccccccccccccCC-CC-----Cch---------------------------hhhHHHHHhhcC Confidence 999998776543221100 00 000 000111122221 No 28 >protein:vir:81072 Length: 432 # NCBI annotation: p07 # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:1889 # MgeName: Xop411 # Cross-refs: genbank:acc:YP_001285677;genbank:gi:148727185;genbank:GeneID:5247117 Probab=100.00 E-value=3.9e-93 Score=527.18 Aligned_cols=411 Identities=21% Similarity=0.315 Sum_probs=331.6 Q ss_pred CCCCCCCCCcccccc---------ccchhhhhhhccCccCCcccCccchhhHHHHhhhHHHHHHHHHHHHhhccCceEEE Q lcl|Aclame:pro 1 MLLANGQTLSAPAMA---------ELSPQMQDSYYYAPAVGMQLERQFSLYGGIYKNQPWVRTVIAKRAQALARLPVKCM 71 (518) Q Consensus 1 ~~f~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~v~~ia~~ia~lp~~v~ 71 (518) -+|.|.+..-.+..+ ...++....+++ ........++.+.++++++|++||++||++||++|+++| T Consensus 8 g~f~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~g~~v~~~~al~~~~V~~~i~~Ia~~ia~lp~~~y 82 (432) T protein:vir:81 8 GLFGQLKAMFVPPDPVDIGGGQTFTPVNATARDLGI-----IISDTGAAVNADAIMRLDAVAACVKLVSQAIAAMPLTMY 82 (432) T ss_pred chhhhhhhhcccccccccccccccccCccchhhhcc-----cccccCcccchHhhhccHHHHHHHHHHHHhhhhCceeeE Confidence 456653332222111 011111111111 111223345667899999999999999999999999999 Q ss_pred EecCCceee-ecchHHHHHhhccCccCCHHHHHHHHHHHHHHcCCeeEEeeeCCCCceeeeeeeCCcceEEEeccCcceE Q lcl|Aclame:pro 72 FTSGDTETE-EHDTGYAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQKNKSGTPEKLMPMHPSRVAIKRNSRTGRY 150 (518) Q Consensus 72 ~~~~~~~~~-~~~~~~~~l~~~PN~~~t~~~f~~~~~~~~ll~G~~~~~i~~~~~G~~~~l~~l~p~~v~~~~~~~~~~~ 150 (518) ++++++..+ .+|+.+++|+.+||++||+++||+.++.+++++||+|++++++ +|++++|||++|+.|++..+.++ .. T Consensus 83 ~~~~~g~~~~~~~~l~~lL~~~PN~~~t~~~f~~~l~~~lll~Gnayv~i~~~-~g~~~~L~~l~~~~v~v~~~~~g-~~ 160 (432) T protein:vir:81 83 MRTPDGRKEAVNHPLYTLLLDGPNSTQTAFDFWQVVVTRLLLDGTAYVRKVVT-DGRIESLQYLANDRLTITTDPKG-NT 160 (432) T ss_pred EecCCcceecccchHHHHHHhcccccCCHHHHHHHHHHHHhhcCCeEEEEEec-CCcEEEEEEEcCCceEEEECCCC-cE Confidence 987777555 4566667777899999999999999999999999999999886 58999999999999999988765 45 Q ss_pred EEEeeccCCCCceeEEEeeeeeEEeecCCCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHccCCcceeeeeCCcCCHH Q lcl|Aclame:pro 151 EYYFQAGAGVGTQLVSFADDEVVPIRFFNPDGLERGLSLMESLKSTIFSEDSSRNATAAMWKNAGRPNLVLRHEKRLSPE 230 (518) Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~p~gil~~~~~~~~e 230 (518) .|.+... ++..+.|++++|||||+++.++ ++|+||+..+...|..+.+++++..++|+||++|+||+++++.++++ T Consensus 161 ~y~~~~~---~g~~~~~~~~~iih~r~~~~dg-~~G~spi~~~~~~i~~~~~~~~~~~~~f~ng~~~~gil~~~~~l~~e 236 (432) T protein:vir:81 161 AYRYRRT---DGQMIDIPKQQIWKIMGYSLDG-ENGLSAIRYGAQIFGTAIAAEAQAARAFRNGQLQSVYYQIDRFLTDD 236 (432) T ss_pred EEEEEec---CceEEEEccccEEEecCCCCCC-cccccHHHHHHHHHHHHHHHHHHHHHHHhcCCCcceEEecCCCCCHH Confidence 5655432 4567889999999999988776 68999999999999999999999999999999999999999999999 Q ss_pred HHHHHHHHHHHHhcCccccccceeccCCcccccccCChhhHHHHHHHHHHHHHHHHHhccchHhhccccccc---cccHH Q lcl|Aclame:pro 231 AQQRLREQFDRAHAGSSNTGKTMVVEEGMEPIPLQLTAVEMQFIEARQLNREEVCGVYDIAPPIVHILDRAT---FSNIS 307 (518) Q Consensus 231 ~~~~~~~~~~~~~~g~~n~g~~~vl~~g~~~~~~~~~~~d~q~~e~~~~~~~~Ia~~fgVpp~~lg~~~~~~---~s~~e 307 (518) +++++++.| .|..|+|++++|++|++|++++++++|+||+|.+++++++||++|||||++||+.+.++ ++|+| T Consensus 237 ~~~~~~~~~----~~~~nag~~~vl~~g~~~~~l~~~~~d~q~le~~~~~~~~Ia~~fgVPp~~lg~~~~~~~~~~sn~e 312 (432) T protein:vir:81 237 QYDSFAKKV----SGSVEAGRAPLLEGGMDVKSLGLNPVDAQLLQSRQYSVESICRFFGVPPSMIGHSSAGTTSWGSGIE 312 (432) T ss_pred HHHHHHHHH----hhhhcCCCceecCCCceEEEccCCHHHHHHHHHHHHHHHHHHHHhCCCHHHcCCcCCccccccchHH Confidence 988877766 45678999999999999999999999999999999999999999999999999877654 48899 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhcchhh-ccceeeechhhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHHhCCCCC Q lcl|Aclame:pro 308 AQMRAFYRDTMAIPIARIQSAMDKYVGQYWV-RKNRMKFDIDDVIQPDWEAKSESTQKMVNSGVATPNEGREIMGLPRSD 386 (518) Q Consensus 308 ~~~~~~~~~~l~P~~~~ie~~ln~~l~~~~~-~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~T~NE~R~~~g~~pi~ 386 (518) ++.+.|+++||.||++.||++||++|++..+ ..++++||++.++++|.+++++.+++++++|+||+||+|+++|+||++ T Consensus 313 q~~~~f~~~tl~P~~~~ie~~l~~kLl~~~~~~~~~~~fd~~~llr~d~~~r~~~~~~~~~~G~~t~NE~R~~~glpp~~ 392 (432) T protein:vir:81 313 SQQLGFLTMTLSPWLRRIEQSIALNLLSPAERRRYFADFDTSALLRADSAARSSYYSQLVNNGLMTRDEAREIEGLPKLG 392 (432) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccCccccCceEEEeechhhhccCHHHHHHHHHHHHhCCCCCHHHHHHHhCCCCCC Confidence 9999999999999999999999999997654 457899999999999999999999999999999999999999999997 Q ss_pred CccCceeeecccccccccccccCCCCCCCCCCCCcccCCCCCccCCcccc Q lcl|Aclame:pro 387 DPKADELYANSALQPLGATPDGAVEGEEAPAPKRPASTPVASLDQSPPAS 436 (518) Q Consensus 387 ~~~gD~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 436 (518) + +++.++++.+++|++......... +... ..+++++...+ T Consensus 393 g-~~~~~~~~~~~~pl~~~~~~~~~~--------~~~~-~~n~~~~~~~~ 432 (432) T protein:vir:81 393 G-NAAVLTVQSAMVPLDSIGLQASPE--------PASG-LGNQQQDKVSK 432 (432) T ss_pred C-CcceEeecCcccchhhhccCCCCC--------CCCC-CCCcccccccC Confidence 3 456677899999987764432211 0000 00011110000 No 29 >protein:vir:98396 Length: 441 # NCBI annotation: portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:1581 # MgeName: phiPVL(108) # Cross-refs: genbank:acc:YP_918929;genbank:gi:119443691;genbank:GeneID:4594558 Probab=100.00 E-value=4.8e-92 Score=521.21 Aligned_cols=413 Identities=17% Similarity=0.218 Sum_probs=330.4 Q ss_pred CCCCCCCCCcc-ccccccchhhhhhhccCccCCcccCccchhhHHHHhhhHHHHHHHHHHHHhhccCceEEEEecCCcee Q lcl|Aclame:pro 1 MLLANGQTLSA-PAMAELSPQMQDSYYYAPAVGMQLERQFSLYGGIYKNQPWVRTVIAKRAQALARLPVKCMFTSGDTET 79 (518) Q Consensus 1 ~~f~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~v~~ia~~ia~lp~~v~~~~~~~~~ 79 (518) =+|.+...... -.....+.|+....++....+ ..+....++++++|++||++||++||++|++++++ +.. T Consensus 27 ~~f~~~e~r~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~al~~~~V~acv~~Ia~~iA~lpl~~~~~---~~~ 97 (441) T protein:vir:98 27 GIFYKNEKRDLQYNEDDLQMMVQTLPGFQGTKL------RQYKDIEAIRHSDIFTAVMMIASDLARMPIRVTVN---GQI 97 (441) T ss_pred ccccccccccccCCCcchHHHHHHhhcccccCc------cccchhhhhccHHHHHHHHHHHHhhccCceEEecC---Ccc Confidence 23333221111 111222333332222222212 12344678899999999999999999999999863 345 Q ss_pred eecchHHHHHhhccCccCCHHHHHHHHHHHHHHcCCeeEEeeeCCCCceeeeeeeCCcceEEEeccCcceEEEEeeccCC Q lcl|Aclame:pro 80 EEHDTGYAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQKNKSGTPEKLMPMHPSRVAIKRNSRTGRYEYYFQAGAG 159 (518) Q Consensus 80 ~~~~~~~~~l~~~PN~~~t~~~f~~~~~~~~ll~G~~~~~i~~~~~G~~~~l~~l~p~~v~~~~~~~~~~~~~~~~~~~~ 159 (518) ...|+.+++|+.+||++||+++||+.++.+++++||+|++|+|+.+|++++|+|++|++|++..+.++...++.+..... T Consensus 98 ~~~~~~~~lL~~~PN~~~t~~~f~~~l~~~lll~Gnay~~i~r~~~G~~~~L~~i~~~~v~v~~~~~g~~~~~~~~~~~~ 177 (441) T protein:vir:98 98 NYSDRIVNLLNTRPNPMYNGYIFKLVVFVSALLTSHGYIEITRDKTGEPMNLTFRKTSEIELKLDARGRLYYFHQRIDSN 177 (441) T ss_pred cccchHHHHHhcccccCCCHHHHHHHHHHHHhhcCCeEEEEEEcCCCcEEEEEEEcCceeEEEECCCCcEEEEEEEeccC Confidence 56777888888999999999999999999999999999999999999999999999999999998776655544444444 Q ss_pred CCceeEEEeeeeeEEeecCCCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHccCCcceeeeeCCcCC-HHHHHHHHHH Q lcl|Aclame:pro 160 VGTQLVSFADDEVVPIRFFNPDGLERGLSLMESLKSTIFSEDSSRNATAAMWKNAGRPNLVLRHEKRLS-PEAQQRLREQ 238 (518) Q Consensus 160 ~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~p~gil~~~~~~~-~e~~~~~~~~ 238 (518) ..+..+.|++++||||++++.++ ++|+||+..+..+|+.+.++++++.++|+||++|+|||++++.++ +++++++++. T Consensus 178 ~~~~~~~~~~~dviHir~~~~dg-~~G~spi~~~~~~i~~~~a~~~~~~~~f~ng~~~~gil~~~~~~~~~e~~~~~~~~ 256 (441) T protein:vir:98 178 GNNIERNVKFEDMLDIKFYSLDG-INGLSLLDTLSRTIESDNNGKDFLNNFLRNGTHAGGILKMKGVLDNKKARDRAREE 256 (441) T ss_pred cceeeEEEccccEEEeccCCCCC-ccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCCcEEEEeCCCCCCHHHHHHHHHH Confidence 45566789999999999887666 689999999999999999999999999999999999999999874 7778999999 Q ss_pred HHHHhcCccccccceeccCCcccccccCChhhHHHHHHHHHHHHHHHHHhccchHhhccccccccccHHHHHHHHHHHHH Q lcl|Aclame:pro 239 FDRAHAGSSNTGKTMVVEEGMEPIPLQLTAVEMQFIEARQLNREEVCGVYDIAPPIVHILDRATFSNISAQMRAFYRDTM 318 (518) Q Consensus 239 ~~~~~~g~~n~g~~~vl~~g~~~~~~~~~~~d~q~~e~~~~~~~~Ia~~fgVpp~~lg~~~~~~~s~~e~~~~~~~~~~l 318 (518) |++.++|.+|+|+++||++|++|++++.+++|+||+|.+++++++||++|||||++||+... .++.+++...|. +|| T Consensus 257 ~~~~~~G~~nag~~~vl~~g~~~~~l~~~~~d~q~~e~r~~~~~~Ia~~fgVPp~~lg~~~~--~~s~~q~~~~y~-~tl 333 (441) T protein:vir:98 257 FHKSFSGTKQAGKVVVLDESMTFDQLEVDTEVLKLIRENKSSTREIAGVFGIPLHKFGIETA--NMSITDANLDYL-STL 333 (441) T ss_pred HHHHhcCccccCcceecCCCceEEEccCChhHHHHHHHHHHhHHHHHHHhCCCHHHcCCCCC--CccHHHHHHHHH-HHH Confidence 99999999999999999999999999999999999999999999999999999999996432 335566666665 699 Q ss_pred HHHHHHHHHHHHhhhcchhhccceeeechhhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHHhCCCCCCccCceeeeccc Q lcl|Aclame:pro 319 AIPIARIQSAMDKYVGQYWVRKNRMKFDIDDVIQPDWEAKSESTQKMVNSGVATPNEGREIMGLPRSDDPKADELYANSA 398 (518) Q Consensus 319 ~P~~~~ie~~ln~~l~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~T~NE~R~~~g~~pi~~~~gD~~~~~~n 398 (518) +||+.+||++||++|++.. .+++++||.+.+++.|.+++++.+++++++|++|+||+|+++|+||++++.++.+++++| T Consensus 334 ~P~~~~ie~~ln~~L~~~~-~~~~~~fd~~~llr~d~~~~~~~~~~~~~~G~~T~NE~R~~~gl~pi~gGd~~~~~~~~n 412 (441) T protein:vir:98 334 KPYITCVCAELNFKFNDEY-VNREFKFDTTEIRVVDEKTQAEIDKINIDSGKMNIDEIRQRDGLAPIPGGNGSIHRVDLN 412 (441) T ss_pred HHHHHHHHHHHHhhccccc-cCceEEEechhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCcceEeeccc Confidence 9999999999999998765 467899999999999999999999999999999999999999999998555557889999 Q ss_pred ccccccccccCCCCCCCCCCCCcccCCCCCccCC Q lcl|Aclame:pro 399 LQPLGATPDGAVEGEEAPAPKRPASTPVASLDQS 432 (518) Q Consensus 399 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 432 (518) ++|++........ ..+....+..++++.+ T Consensus 413 ~~~~~~~~~~q~~-----~~~~~~~~~kgGe~ne 441 (441) T protein:vir:98 413 HVNIELVDEYQMN-----KSRATDKKLKGGEENE 441 (441) T ss_pred ccccccccccccc-----cccccccccCCCCCCC Confidence 9998875432111 0000000000111111 No 30 >protein:vir:9408 Length: 441 # NCBI annotation: portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:167 # MgeName: phi 13 # Cross-refs: genbank:acc:NP_803386;genbank:gi:29028698;genbank:GeneID:1258164 Probab=100.00 E-value=5.4e-92 Score=520.93 Aligned_cols=412 Identities=17% Similarity=0.222 Sum_probs=330.0 Q ss_pred CCCCCCCCCc-cccccccchhhhhhhccCccCCcccCccchhhHHHHhhhHHHHHHHHHHHHhhccCceEEEEecCCcee Q lcl|Aclame:pro 1 MLLANGQTLS-APAMAELSPQMQDSYYYAPAVGMQLERQFSLYGGIYKNQPWVRTVIAKRAQALARLPVKCMFTSGDTET 79 (518) Q Consensus 1 ~~f~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~v~~ia~~ia~lp~~v~~~~~~~~~ 79 (518) =+|.+..... .......+.|+....++....+ ..+....++++++|++||++||++||++|++++++ +.. T Consensus 27 ~lf~~~e~R~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~al~~~~V~~cv~~Ia~~iA~lp~~~~~~---~~~ 97 (441) T protein:vir:94 27 GIFYKNEKRDLQYNEDDLQMMVQTLPGFQGTKL------RQYKDIEAIRHSDIFTAVMMIASDLARMPIRVTVN---GQI 97 (441) T ss_pred ccccccccccccCCCcchHHHHHHhcccCcccc------cccchhhhhccHHHHHHHHHHHHhhccCceeeecC---ccc Confidence 1243322111 1111122334333333322222 12344667899999999999999999999999863 345 Q ss_pred eecchHHHHHhhccCccCCHHHHHHHHHHHHHHcCCeeEEeeeCCCCceeeeeeeCCcceEEEeccCcceEEEEeeccCC Q lcl|Aclame:pro 80 EEHDTGYAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQKNKSGTPEKLMPMHPSRVAIKRNSRTGRYEYYFQAGAG 159 (518) Q Consensus 80 ~~~~~~~~~l~~~PN~~~t~~~f~~~~~~~~ll~G~~~~~i~~~~~G~~~~l~~l~p~~v~~~~~~~~~~~~~~~~~~~~ 159 (518) ...|+.+++|+.+||++||+++||+.++.+++++||+|++++|+..|++++|+|++|++|++..+.++...++.+..... T Consensus 98 ~~~~~~~~lL~~~PN~~~t~~~f~~~~~~~lll~Gnay~~i~r~~~G~~~~L~~i~~~~v~v~~d~~g~~~~~~~~~~~~ 177 (441) T protein:vir:94 98 NYSDRIVNLLNTRPNPMYNGYIFKLVVFVSALLTSHGYIEITRDKTGEPMNLTFRKTSEIELKSDARGRLYYFHQRIDSN 177 (441) T ss_pred cccchHHHHHhcccCcCCCHHHHHHHHHHHHhhcCCeEEEEEECCCCcEEEEEEEcCceeEEEECCCccEEEEEEEeccC Confidence 56777888888999999999999999999999999999999999999999999999999999998776655444444444 Q ss_pred CCceeEEEeeeeeEEeecCCCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHccCCcceeeeeCCcC-CHHHHHHHHHH Q lcl|Aclame:pro 160 VGTQLVSFADDEVVPIRFFNPDGLERGLSLMESLKSTIFSEDSSRNATAAMWKNAGRPNLVLRHEKRL-SPEAQQRLREQ 238 (518) Q Consensus 160 ~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~p~gil~~~~~~-~~e~~~~~~~~ 238 (518) ..+..+.+++++|||||+++.++ ++|+||+..+..+|+.+.+++++..++|+||++|+|||++++.+ ++++++++++. T Consensus 178 ~~~~~~~~~~~dvih~k~~~~dg-~~G~spl~~~~~~i~~~~~~~~~~~~~f~ng~~p~gil~~~~~~~~~e~~e~~r~~ 256 (441) T protein:vir:94 178 GNNIERNVKFEDMLDIKFYSLDG-INGLSLLDTLSRTIESDNNGKDFLNNFLRNGTHAGGILKMKGVLDNKKARDRAREE 256 (441) T ss_pred CceeEEEEccccEEEeccCCCCC-ccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCCcEEEEcCCCCCCHHHHHHHHHH Confidence 45566789999999999887665 68999999999999999999999999999999999999999887 47788999999 Q ss_pred HHHHhcCccccccceeccCCcccccccCChhhHHHHHHHHHHHHHHHHHhccchHhhccccccccccHHHHHHHHHHHHH Q lcl|Aclame:pro 239 FDRAHAGSSNTGKTMVVEEGMEPIPLQLTAVEMQFIEARQLNREEVCGVYDIAPPIVHILDRATFSNISAQMRAFYRDTM 318 (518) Q Consensus 239 ~~~~~~g~~n~g~~~vl~~g~~~~~~~~~~~d~q~~e~~~~~~~~Ia~~fgVpp~~lg~~~~~~~s~~e~~~~~~~~~~l 318 (518) |++.++|..|+|+++|+++|++|++++.+++|+||+|.+++++++||++|||||+++|.... + ++.+++...| .+|| T Consensus 257 ~~~~~~G~~nag~~~vl~~G~~~~~l~~~~~d~q~~e~~~~~~~~Ia~~fgVPp~~lg~~~~-~-~s~~q~~~~~-~~tl 333 (441) T protein:vir:94 257 FHKSFSGTKQAGKVVVLDESMTFDQLEVDTEVLKLIRENKSSTREIAGVFGIPLHKFGIETA-N-MSITDANLDY-LSTL 333 (441) T ss_pred HHHHhcCccccCcceecCCCceEEEccCChhHHHHHHHHHHhHHHHHHHhCCCHHHcCCCCC-C-ccHHHHHHHH-HHHH Confidence 99999999999999999999999999999999999999999999999999999999997432 3 3456665554 5699 Q ss_pred HHHHHHHHHHHHhhhcchhhccceeeechhhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHHhCCCCCCccCceeeeccc Q lcl|Aclame:pro 319 AIPIARIQSAMDKYVGQYWVRKNRMKFDIDDVIQPDWEAKSESTQKMVNSGVATPNEGREIMGLPRSDDPKADELYANSA 398 (518) Q Consensus 319 ~P~~~~ie~~ln~~l~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~T~NE~R~~~g~~pi~~~~gD~~~~~~n 398 (518) +|++.+||++||++|++.. .+++++||++.+++.|.+++++.+++++++|++|+||+|+++|+||++++.++.+++++| T Consensus 334 ~P~~~~ie~eln~kl~~~~-~~~~~~fd~~~llr~D~~~~~~~~~~~i~~G~~T~NE~R~~~gl~Pi~ggd~~~~~~~~n 412 (441) T protein:vir:94 334 KPYITCVCAELNFKFNDEY-VNREFKFDTTEIRVVDEKTQAEIDKINIDSGKMNIDEIRQRDGLAPIPGGNGSIHRVDLN 412 (441) T ss_pred HHHHHHHHHHHhhhccccc-cCceEEeechhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCcceEeeccc Confidence 9999999999999998764 467899999999999999999999999999999999999999999998555557889999 Q ss_pred ccccccccccCCCCCCCCCCCCcccC-CCCCccC Q lcl|Aclame:pro 399 LQPLGATPDGAVEGEEAPAPKRPAST-PVASLDQ 431 (518) Q Consensus 399 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 431 (518) ++|++........ ..+...++ ..++.++ T Consensus 413 ~~~~~~~~~~~~~-----~~~~~~~~~kgGe~~e 441 (441) T protein:vir:94 413 HVNIELVDEYQMN-----KSRATDKKLKGGEENE 441 (441) T ss_pred ccccccccccccc-----cccccccccCCCCCCC Confidence 9998875432111 00000000 0111111 No 31 >protein:vir:79984 Length: 441 # NCBI annotation: portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:1875 # MgeName: tp310-3 # Cross-refs: genbank:acc:YP_001430000;genbank:gi:156604055;genbank:GeneID:5525444 Probab=100.00 E-value=5.4e-92 Score=520.93 Aligned_cols=412 Identities=17% Similarity=0.222 Sum_probs=330.0 Q ss_pred CCCCCCCCCc-cccccccchhhhhhhccCccCCcccCccchhhHHHHhhhHHHHHHHHHHHHhhccCceEEEEecCCcee Q lcl|Aclame:pro 1 MLLANGQTLS-APAMAELSPQMQDSYYYAPAVGMQLERQFSLYGGIYKNQPWVRTVIAKRAQALARLPVKCMFTSGDTET 79 (518) Q Consensus 1 ~~f~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~v~~ia~~ia~lp~~v~~~~~~~~~ 79 (518) =+|.+..... .......+.|+....++....+ ..+....++++++|++||++||++||++|++++++ +.. T Consensus 27 ~lf~~~e~R~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~al~~~~V~~cv~~Ia~~iA~lp~~~~~~---~~~ 97 (441) T protein:vir:79 27 GIFYKNEKRDLQYNEDDLQMMVQTLPGFQGTKL------RQYKDIEAIRHSDIFTAVMMIASDLARMPIRVTVN---GQI 97 (441) T ss_pred ccccccccccccCCCcchHHHHHHhcccCcccc------cccchhhhhccHHHHHHHHHHHHhhccCceeeecC---ccc Confidence 1243322111 1111122334333333322222 12344667899999999999999999999999863 345 Q ss_pred eecchHHHHHhhccCccCCHHHHHHHHHHHHHHcCCeeEEeeeCCCCceeeeeeeCCcceEEEeccCcceEEEEeeccCC Q lcl|Aclame:pro 80 EEHDTGYAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQKNKSGTPEKLMPMHPSRVAIKRNSRTGRYEYYFQAGAG 159 (518) Q Consensus 80 ~~~~~~~~~l~~~PN~~~t~~~f~~~~~~~~ll~G~~~~~i~~~~~G~~~~l~~l~p~~v~~~~~~~~~~~~~~~~~~~~ 159 (518) ...|+.+++|+.+||++||+++||+.++.+++++||+|++++|+..|++++|+|++|++|++..+.++...++.+..... T Consensus 98 ~~~~~~~~lL~~~PN~~~t~~~f~~~~~~~lll~Gnay~~i~r~~~G~~~~L~~i~~~~v~v~~d~~g~~~~~~~~~~~~ 177 (441) T protein:vir:79 98 NYSDRIVNLLNTRPNPMYNGYIFKLVVFVSALLTSHGYIEITRDKTGEPMNLTFRKTSEIELKSDARGRLYYFHQRIDSN 177 (441) T ss_pred cccchHHHHHhcccCcCCCHHHHHHHHHHHHhhcCCeEEEEEECCCCcEEEEEEEcCceeEEEECCCccEEEEEEEeccC Confidence 56777888888999999999999999999999999999999999999999999999999999998776655444444444 Q ss_pred CCceeEEEeeeeeEEeecCCCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHccCCcceeeeeCCcC-CHHHHHHHHHH Q lcl|Aclame:pro 160 VGTQLVSFADDEVVPIRFFNPDGLERGLSLMESLKSTIFSEDSSRNATAAMWKNAGRPNLVLRHEKRL-SPEAQQRLREQ 238 (518) Q Consensus 160 ~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~p~gil~~~~~~-~~e~~~~~~~~ 238 (518) ..+..+.+++++|||||+++.++ ++|+||+..+..+|+.+.+++++..++|+||++|+|||++++.+ ++++++++++. T Consensus 178 ~~~~~~~~~~~dvih~k~~~~dg-~~G~spl~~~~~~i~~~~~~~~~~~~~f~ng~~p~gil~~~~~~~~~e~~e~~r~~ 256 (441) T protein:vir:79 178 GNNIERNVKFEDMLDIKFYSLDG-INGLSLLDTLSRTIESDNNGKDFLNNFLRNGTHAGGILKMKGVLDNKKARDRAREE 256 (441) T ss_pred CceeEEEEccccEEEeccCCCCC-ccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCCcEEEEcCCCCCCHHHHHHHHHH Confidence 45566789999999999887665 68999999999999999999999999999999999999999887 47788999999 Q ss_pred HHHHhcCccccccceeccCCcccccccCChhhHHHHHHHHHHHHHHHHHhccchHhhccccccccccHHHHHHHHHHHHH Q lcl|Aclame:pro 239 FDRAHAGSSNTGKTMVVEEGMEPIPLQLTAVEMQFIEARQLNREEVCGVYDIAPPIVHILDRATFSNISAQMRAFYRDTM 318 (518) Q Consensus 239 ~~~~~~g~~n~g~~~vl~~g~~~~~~~~~~~d~q~~e~~~~~~~~Ia~~fgVpp~~lg~~~~~~~s~~e~~~~~~~~~~l 318 (518) |++.++|..|+|+++|+++|++|++++.+++|+||+|.+++++++||++|||||+++|.... + ++.+++...| .+|| T Consensus 257 ~~~~~~G~~nag~~~vl~~G~~~~~l~~~~~d~q~~e~~~~~~~~Ia~~fgVPp~~lg~~~~-~-~s~~q~~~~~-~~tl 333 (441) T protein:vir:79 257 FHKSFSGTKQAGKVVVLDESMTFDQLEVDTEVLKLIRENKSSTREIAGVFGIPLHKFGIETA-N-MSITDANLDY-LSTL 333 (441) T ss_pred HHHHhcCccccCcceecCCCceEEEccCChhHHHHHHHHHHhHHHHHHHhCCCHHHcCCCCC-C-ccHHHHHHHH-HHHH Confidence 99999999999999999999999999999999999999999999999999999999997432 3 3456665554 5699 Q ss_pred HHHHHHHHHHHHhhhcchhhccceeeechhhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHHhCCCCCCccCceeeeccc Q lcl|Aclame:pro 319 AIPIARIQSAMDKYVGQYWVRKNRMKFDIDDVIQPDWEAKSESTQKMVNSGVATPNEGREIMGLPRSDDPKADELYANSA 398 (518) Q Consensus 319 ~P~~~~ie~~ln~~l~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~T~NE~R~~~g~~pi~~~~gD~~~~~~n 398 (518) +|++.+||++||++|++.. .+++++||++.+++.|.+++++.+++++++|++|+||+|+++|+||++++.++.+++++| T Consensus 334 ~P~~~~ie~eln~kl~~~~-~~~~~~fd~~~llr~D~~~~~~~~~~~i~~G~~T~NE~R~~~gl~Pi~ggd~~~~~~~~n 412 (441) T protein:vir:79 334 KPYITCVCAELNFKFNDEY-VNREFKFDTTEIRVVDEKTQAEIDKINIDSGKMNIDEIRQRDGLAPIPGGNGSIHRVDLN 412 (441) T ss_pred HHHHHHHHHHHhhhccccc-cCceEEeechhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCcceEeeccc Confidence 9999999999999998764 467899999999999999999999999999999999999999999998555557889999 Q ss_pred ccccccccccCCCCCCCCCCCCcccC-CCCCccC Q lcl|Aclame:pro 399 LQPLGATPDGAVEGEEAPAPKRPAST-PVASLDQ 431 (518) Q Consensus 399 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 431 (518) ++|++........ ..+...++ ..++.++ T Consensus 413 ~~~~~~~~~~~~~-----~~~~~~~~~kgGe~~e 441 (441) T protein:vir:79 413 HVNIELVDEYQMN-----KSRATDKKLKGGEENE 441 (441) T ss_pred ccccccccccccc-----cccccccccCCCCCCC Confidence 9998875432111 00000000 0111111 No 32 >protein:vir:81218 Length: 423 # NCBI annotation: gp3, phage portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:1893 # MgeName: BFK20 # Cross-refs: genbank:acc:YP_001456733;genbank:gi:157168376;interpro:IPR006427;interpro:IPR006944;uniprot:Q9MBK2;genbank:GeneID:5580341 Probab=100.00 E-value=7.4e-92 Score=520.20 Aligned_cols=403 Identities=21% Similarity=0.301 Sum_probs=334.8 Q ss_pred CCCCCCCCCccccccccchhhhh-hhccCccCCcccCccchhhHHHHhhhHHHHHHHHHHHHhhccCceEEEEecCCce- Q lcl|Aclame:pro 1 MLLANGQTLSAPAMAELSPQMQD-SYYYAPAVGMQLERQFSLYGGIYKNQPWVRTVIAKRAQALARLPVKCMFTSGDTE- 78 (518) Q Consensus 1 ~~f~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~v~~ia~~ia~lp~~v~~~~~~~~- 78 (518) -|+.++.....+ .+.|+.. .+......+ ........++++++|++||++||++||++|+++|++++++. T Consensus 6 ~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~v~~~i~~ia~~ia~lp~~~~~~~~dg~~ 76 (423) T protein:vir:81 6 KLGLAPSVVATP----EPIELVGPIFESLKLST-----KNMTVEQIWEDQPHLRTVTTFIARNVASLQLQAFERVEDGGR 76 (423) T ss_pred hhccccccccCc----ccccccccccccccccc-----chhhHHHHHHhhhHHHHHHHHHHHhHhhCceEEEEEecCCce Confidence 232222222111 1112211 111111111 12244567889999999999999999999999998776654 Q ss_pred eeecchHHHHHhhccCccCCHHHHHHHHHHHHHHcCCeeEEeeeCCC--CceeeeeeeCCcceEEEeccCc-ceEEEEee Q lcl|Aclame:pro 79 TEEHDTGYAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQKNKS--GTPEKLMPMHPSRVAIKRNSRT-GRYEYYFQ 155 (518) Q Consensus 79 ~~~~~~~~~~l~~~PN~~~t~~~f~~~~~~~~ll~G~~~~~i~~~~~--G~~~~l~~l~p~~v~~~~~~~~-~~~~~~~~ 155 (518) ++..+|+++.|+.+||++||+++||+.++.+++++||+|+++.++.. +.+..|+|+++..+++....++ +.+.|.+. T Consensus 77 ~~~~~~~~~~ll~~PN~~~t~~~f~~~~~~~l~l~Gna~~~i~rd~~~~~~~~~l~p~~~~~v~~~~~~~~~~~~~Y~~~ 156 (423) T protein:vir:81 77 ERVREGHLARVCKLANSDMTMYDLLERTMFDLCLYDEFFWLLPGDLGVDTPTLDIRPIPVSWVQRRAYKDGWGSLDYIII 156 (423) T ss_pred eeeccchHHHHhhcCCCCCCHHHHHHHHHHHHhhcCCeEEEEEecCCcCcceEEEeecccceeeeeeccCCCcceEEEEE Confidence 45566777788889999999999999999999999999999988753 4667888888888887765443 56677776 Q ss_pred ccCCCCceeEEEeeeeeEEeecCCCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHccCCcceeeeeCC-----cCCHH Q lcl|Aclame:pro 156 AGAGVGTQLVSFADDEVVPIRFFNPDGLERGLSLMESLKSTIFSEDSSRNATAAMWKNAGRPNLVLRHEK-----RLSPE 230 (518) Q Consensus 156 ~~~~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~p~gil~~~~-----~~~~e 230 (518) .....++..+.+++++|||+|.+++++..+|+||+..++.+++...++++++.++|+||++|+|||+++. .++++ T Consensus 157 ~~~~~~g~~~~~~~~evih~r~~~~~~~~~G~spi~~~~~~i~~~~~~~~~~~~~f~ng~~p~gvi~~~~~~~~~~l~~e 236 (423) T protein:vir:81 157 ESGDNDGRSVKVPGERVIHRHGYNPKTMKRGKSPVQSLRDILGEQIEAAIFRAQMWRNGPRPGMVIMRDPESKAGKWDAE 236 (423) T ss_pred EecCCCceEEEEcccceEEecCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEecCcccCccCCHH Confidence 6666677888999999999999999998899999999999999999999999999999999999998764 47899 Q ss_pred HHHHHHHHHHHHhc-CccccccceeccCCcccccccCChhhHHHHHHHHHHHHHHHHHhccchHhhccccccccccHHHH Q lcl|Aclame:pro 231 AQQRLREQFDRAHA-GSSNTGKTMVVEEGMEPIPLQLTAVEMQFIEARQLNREEVCGVYDIAPPIVHILDRATFSNISAQ 309 (518) Q Consensus 231 ~~~~~~~~~~~~~~-g~~n~g~~~vl~~g~~~~~~~~~~~d~q~~e~~~~~~~~Ia~~fgVpp~~lg~~~~~~~s~~e~~ 309 (518) +++++++.|++.+. +..|+|+++||++|++|++++++++|+||+|.+++++++||++|||||+++|+.++++++|+|++ T Consensus 237 ~~~~~~~~~~~~~~~~~~n~g~~~vl~~g~~~~~l~~s~~d~q~~e~~~~~~~eIa~~fgVPp~~lg~~~~~t~sn~e~~ 316 (423) T protein:vir:81 237 SRTRFMANLRASFSPKSSDVGGTLLLEDGMKAENFHTTSKDEQTVETTKLSLQTVAQVYGINPTMVGQLDNANYSNVREF 316 (423) T ss_pred HHHHHHHHHHHHhccccccCCcceecCCCceEEeccCChhhHHHHHHHHhhHHHHHHHhCCCHHHhcCCCCCCcccHHHH Confidence 99999999999984 67889999999999999999999999999999999999999999999999999999999999999 Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcchhh---ccceeeechhhhhccCHHHHHHHHHHHHh-CCCcCHHHHHHHHhCCCC Q lcl|Aclame:pro 310 MRAFYRDTMAIPIARIQSAMDKYVGQYWV---RKNRMKFDIDDVIQPDWEAKSESTQKMVN-SGVATPNEGREIMGLPRS 385 (518) Q Consensus 310 ~~~~~~~~l~P~~~~ie~~ln~~l~~~~~---~~~~~~fd~~~l~~~d~~~~~~~~~~~~~-~g~~T~NE~R~~~g~~pi 385 (518) .+.|+++||.||+..||++|+++|++..+ .+++++||.+.++++|.+++++.+.+++. .||||+||+|+++|+||+ T Consensus 317 ~~~f~~~~L~P~~~~ie~~l~~~L~~~~~~~~~~~~~~fd~~~llr~d~~~r~~~~~~~l~~~G~~T~NE~R~~~gl~p~ 396 (423) T protein:vir:81 317 RKALYGDNLGSWIRIIQDVMNLFLLPRVGIDNEKFYFEFNLEEKLRASFEEAAEIKRAAVGNVAWMTINEVRAMDNLPSI 396 (423) T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhcCccccccCccEEEecchhhhccCHHHHHHHHHHHHhCCCCcCHHHHHHHhCCCCC Confidence 99999999999999999999999998754 46789999999999999999999999885 699999999999999999 Q ss_pred CCccCceeeecccccccccccccCCCCCCCCCCCCcccC Q lcl|Aclame:pro 386 DDPKADELYANSALQPLGATPDGAVEGEEAPAPKRPAST 424 (518) Q Consensus 386 ~~~~gD~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~ 424 (518) + |||++++|.|+.+.+.... +++..+| T Consensus 397 ~--gGD~~~~p~n~~~~~~~~~----------~~~~~~t 423 (423) T protein:vir:81 397 D--GGDDLARPLNTEFGDSEDA----------PGEEVET 423 (423) T ss_pred C--CcceeecccccccCccCCC----------CCCCCCC Confidence 6 8999999999876443211 1111111 No 33 >protein:vir:101647 Length: 460 # NCBI annotation: phage portal protein # Family: family:all:26542 # MgeID: mge:1646 # MgeName: 11b # Cross-refs: genbank:acc:YP_112492;genbank:gi:53793592;uniprot:Q5ZGG1;genbank:GeneID:3101755 Probab=100.00 E-value=1.6e-91 Score=518.33 Aligned_cols=408 Identities=14% Similarity=0.170 Sum_probs=332.4 Q ss_pred CCCCCCCCCccccccccchhhhhhhccCccCCcccCccchhhHHHHhhhHHHHHHHHHHHHhhccCceEEEEecCCcee- Q lcl|Aclame:pro 1 MLLANGQTLSAPAMAELSPQMQDSYYYAPAVGMQLERQFSLYGGIYKNQPWVRTVIAKRAQALARLPVKCMFTSGDTET- 79 (518) Q Consensus 1 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~v~~ia~~ia~lp~~v~~~~~~~~~- 79 (518) -++.++.+. +....+.|+. .++.. ..+.+ .....+..+.++++++|++||++||++||+|||+||+.+.++.. T Consensus 7 ~~~~~~~~~---~~~~~~~~~~-~~g~~-~~~~~-~~~~~~~~~~a~~~~~v~~~v~~ia~~iA~lp~~v~~~~~~g~~~ 80 (460) T protein:vir:10 7 RALRELTGL---DNKFNDAFIK-YIGQT-FTKYD-NNGKTYLEQGYNINPDVYSCISQMAAKTVAVPYTIKVVKDTKAYQ 80 (460) T ss_pred HHHhhhhcc---CCCchHHHHH-hhccc-cCCCc-cchhhhhHHHHhcchHHHHHHHHHHHhhhhCceEEEeccCCccch Confidence 222221111 1122333431 22211 11111 12234556789999999999999999999999999998776532 Q ss_pred ---------------------------eecchHHHHHhhccCccCCHHHHHHHHHHHHHHcCCeeEEeeeCC----CCce Q lcl|Aclame:pro 80 ---------------------------EEHDTGYAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQKNK----SGTP 128 (518) Q Consensus 80 ---------------------------~~~~~~~~~l~~~PN~~~t~~~f~~~~~~~~ll~G~~~~~i~~~~----~G~~ 128 (518) ...++.+..|+.+||++||+++||+.++.+++++||+|++++++. .|.+ T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~PN~~~t~~~f~~~~~~~lll~Gnay~~i~r~~~~~~~G~~ 160 (460) T protein:vir:10 81 QLNNLNISTKGLYSFTQSLQKNRLDTKAFSETEKAFPLESPNPTQTWADIYSLYKTYMRLNGNCYFYLMSPDDGINAGVP 160 (460) T ss_pred hhhhhhhhhhhhHHHHHHhhcchhhhcccchhHHHHHHhCCCCCCCHHHHHHHHHHHHhhcCCeEEEEEecCCCccCcee Confidence 234456788999999999999999999999999999999999964 4789 Q ss_pred eeeeeeCCcceEEEeccCcceEEEEeec---cCCCCceeEEEeeeeeEEeecCCCC-----cccccchHHHHHHHHHHHH Q lcl|Aclame:pro 129 EKLMPMHPSRVAIKRNSRTGRYEYYFQA---GAGVGTQLVSFADDEVVPIRFFNPD-----GLERGLSLMESLKSTIFSE 200 (518) Q Consensus 129 ~~l~~l~p~~v~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~vih~~~~~~~-----~~~~G~s~~~~~~~~i~~~ 200 (518) ++|||++|++|++..+.++....|.+.. ....++..+.|++++|||||+++++ +..+|+||+..+...|... T Consensus 161 ~~L~~l~~~~v~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~evih~r~~~~~~~~~~~~~~G~sp~~~~~~~i~~~ 240 (460) T protein:vir:10 161 SQMYVLPAHLIKIVLKDDINLLSTDSPIKSYMLIQGDQFIEFNEDEVIHTKYANPNFDLQGSHLYGMSPIRAILRNINSQ 240 (460) T ss_pred EEEEEEcCceEEEEEcCCCceeeeeeeeeEEEEecCceeEEecccceEEEecCCCCcccccCccccccHHHHHHHHHHHH Confidence 9999999999999998887665554321 1124567789999999999988765 3568999999999999999 Q ss_pred HHHHHHHHHHHHccCCcceeeeeCCcCCHHHHHHHHHHHHHHhcCccccccceeccCCcccccccCChhhHHHHHHHHHH Q lcl|Aclame:pro 201 DSSRNATAAMWKNAGRPNLVLRHEKRLSPEAQQRLREQFDRAHAGSSNTGKTMVVEEGMEPIPLQLTAVEMQFIEARQLN 280 (518) Q Consensus 201 ~~~~~~~~~~~~ng~~p~gil~~~~~~~~e~~~~~~~~~~~~~~g~~n~g~~~vl~~g~~~~~~~~~~~d~q~~e~~~~~ 280 (518) .++++++.++|+||+.|+++++.+..+++++++++++.|++.++|.+|+|+++++++|++|+++++++.|+||+|.++++ T Consensus 241 ~~~~~~~~~~f~ng~~~~~i~~~~~~l~~e~~~~~~~~~~~~~~g~~n~g~~~vl~~g~~~~~l~~~~~d~q~~e~~~~~ 320 (460) T protein:vir:10 241 NSTIDNNVKTMQNGGVFGFIHGGSTGLTQPQADSLKQRLTEMDKSPDRLSQIAGASGEIAFTKISLNTDELKPFDYLKYD 320 (460) T ss_pred HHHHHHHHHHHhcCCCcceeeecCCCCCHHHHHHHHHHHHHHhcCccccCCceecCCCceEEEccCChhHHHHHHHHHHH Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred HHHHHHHhccchHhhccccc--cccccHHHHHHHHHHHHHHHHHHHHHHHHHhhhcchhhc--cceeeechhhh--hccC Q lcl|Aclame:pro 281 REEVCGVYDIAPPIVHILDR--ATFSNISAQMRAFYRDTMAIPIARIQSAMDKYVGQYWVR--KNRMKFDIDDV--IQPD 354 (518) Q Consensus 281 ~~~Ia~~fgVpp~~lg~~~~--~~~s~~e~~~~~~~~~~l~P~~~~ie~~ln~~l~~~~~~--~~~~~fd~~~l--~~~d 354 (518) +++||++|||||++||+.++ .+++|+|++.+.|+++||.||+..||++||++|++..+. +++++||++.+ ++.| T Consensus 321 ~~~Ia~~fgVPp~~lg~~~~~t~~~sn~e~~~~~f~~~~l~P~~~~ie~~ln~kl~~~~~~~~~~~i~~d~~~l~~l~~d 400 (460) T protein:vir:10 321 QKAICNALGWSDKLLNNNEGGGLNTGNLEEERKRVVTDNIQPDLVILKQAFDKKFIKRFKGYENAVIEWDISELPEMQTD 400 (460) T ss_pred HHHHHHHhCCCHHHhCCCCCCCCccccHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcccccCCceEEeecchhhhHHHH Confidence 99999999999999998754 468999999999999999999999999999999987654 57788998887 5555 Q ss_pred HHHHHHHHHHHHhCCCcCHHHHHHHHhCCCCCCccCceeeecccccccccccccCCCCCCCCCC Q lcl|Aclame:pro 355 WEAKSESTQKMVNSGVATPNEGREIMGLPRSDDPKADELYANSALQPLGATPDGAVEGEEAPAP 418 (518) Q Consensus 355 ~~~~~~~~~~~~~~g~~T~NE~R~~~g~~pi~~~~gD~~~~~~n~~~~~~~~~~~~~~~~~~~~ 418 (518) .+++ ..++++|++|+||+|+.+|+||+++++||++++|+|++|++...++...+..+... T Consensus 401 ~~~~----~~~~~~g~~T~NE~R~~~g~~pi~~~~gD~~~~~~n~~~~~~~~~~~~~~~~nq~~ 460 (460) T protein:vir:10 401 MVAM----ASWLNTIPVTPNEIRIAMKYETLNQDGMDIVFMPSNKVRIDDVSNNLIDSAFNQNQ 460 (460) T ss_pred HHHH----HHHHhCCCCCHHHHHHHhCCCCCCCCCCCeeeecccccchhhcccccCCCcccCCC Confidence 5544 44678999999999999999999999999999999999998654432211111000 No 34 >protein:vir:4598 Length: 416 # NCBI annotation: portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:101 # MgeName: PVL # Cross-refs: genbank:acc:NP_058443;genbank:gi:9635169;genbank:GeneID:1262702 Probab=100.00 E-value=1.1e-90 Score=513.81 Aligned_cols=413 Identities=17% Similarity=0.228 Sum_probs=331.8 Q ss_pred CCCCCCCCCcc-ccccccchhhhhhhccCccCCcccCccchhhHHHHhhhHHHHHHHHHHHHhhccCceEEEEecCCcee Q lcl|Aclame:pro 1 MLLANGQTLSA-PAMAELSPQMQDSYYYAPAVGMQLERQFSLYGGIYKNQPWVRTVIAKRAQALARLPVKCMFTSGDTET 79 (518) Q Consensus 1 ~~f~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~v~~ia~~ia~lp~~v~~~~~~~~~ 79 (518) =+|.+...... ........++...+++....+. .+....++++++|++||++||++||++||+++++ +.. T Consensus 2 g~f~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~al~~~~v~~cv~~Ia~~iA~~p~~~~~~---~~~ 72 (416) T protein:vir:45 2 GIFYKNEKRDLQYNEDDLQMMVQTLPGFQGTKLR------QYKDIEAIRHSDIFTAVMMIASDLARMPIRVTVN---GQI 72 (416) T ss_pred CcccccccccccCCCcchhHHHHHhccccccCcc------ccchhhhhcchHHHHHHHHHHHhhccCceEEecC---ccc Confidence 24444322111 1112223344433333322222 2344567899999999999999999999999863 345 Q ss_pred eecchHHHHHhhccCccCCHHHHHHHHHHHHHHcCCeeEEeeeCCCCceeeeeeeCCcceEEEeccCcceEEEEeeccCC Q lcl|Aclame:pro 80 EEHDTGYAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQKNKSGTPEKLMPMHPSRVAIKRNSRTGRYEYYFQAGAG 159 (518) Q Consensus 80 ~~~~~~~~~l~~~PN~~~t~~~f~~~~~~~~ll~G~~~~~i~~~~~G~~~~l~~l~p~~v~~~~~~~~~~~~~~~~~~~~ 159 (518) ...|+.+++|+.+||++||+++||+.++.+++++||+|++++++..|++++|||++|++|++..+.++...++.+..... T Consensus 73 ~~~~~~~~lL~~~PN~~~t~~~f~~~~~~~lll~Gna~~~i~r~~~G~~~~L~~i~~~~v~v~~~~~g~~~~~~~~~~~~ 152 (416) T protein:vir:45 73 NYSDRIVNLLNTRPNPMYNGYIFKLVVFVSALLTSHGYIEITRDKTGEPMNLTFRKTSEIELKSDARGRLYYFHQRIDSN 152 (416) T ss_pred cccchHHHHHhcccccCCCHHHHHHHHHHHHhhcCCeEEEEEECCCCcEEEEEEEcCceeEEEECCCccEEEEEEEecCC Confidence 56777888888999999999999999999999999999999999999999999999999999998776555444444444 Q ss_pred CCceeEEEeeeeeEEeecCCCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHccCCcceeeeeCCcCC-HHHHHHHHHH Q lcl|Aclame:pro 160 VGTQLVSFADDEVVPIRFFNPDGLERGLSLMESLKSTIFSEDSSRNATAAMWKNAGRPNLVLRHEKRLS-PEAQQRLREQ 238 (518) Q Consensus 160 ~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~p~gil~~~~~~~-~e~~~~~~~~ 238 (518) ..+..+.|++++|||||+++.++ ++|+||+..+..+++.+.++++++.++|+||++|+|||++++.++ +++++++++. T Consensus 153 ~~~~~~~~~~~evihir~~~~d~-~~G~s~i~~~~~~i~~~~~~~~~~~~~f~ng~~~~gil~~~~~~~~~~~~~~~~~~ 231 (416) T protein:vir:45 153 GNNIERNVKFEDMLDIKFYSLDG-INGLSLLDTLSRTIESDNNGKDFLNNFLRNGTHAGGILKMKGVLDNKKARDRAREE 231 (416) T ss_pred CceeEEEEccccEEEeccCCCCC-ccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCCcEEEEeCCCCCCHHHHHHHHHH Confidence 45566789999999999887665 689999999999999999999999999999999999999998874 6778999999 Q ss_pred HHHHhcCccccccceeccCCcccccccCChhhHHHHHHHHHHHHHHHHHhccchHhhccccccccccHHHHHHHHHHHHH Q lcl|Aclame:pro 239 FDRAHAGSSNTGKTMVVEEGMEPIPLQLTAVEMQFIEARQLNREEVCGVYDIAPPIVHILDRATFSNISAQMRAFYRDTM 318 (518) Q Consensus 239 ~~~~~~g~~n~g~~~vl~~g~~~~~~~~~~~d~q~~e~~~~~~~~Ia~~fgVpp~~lg~~~~~~~s~~e~~~~~~~~~~l 318 (518) |++.+.|..|+|+++|+++|++|++++.+++|+||+|.+++++++||++|||||.++|.... + ++.+++... +.+|| T Consensus 232 ~~~~~~g~~nag~~~vl~~g~~~~~l~~~~~d~q~~e~~~~~~~~Ia~~fgVPp~~lg~~~~-~-~~~~~~~~~-~~~~l 308 (416) T protein:vir:45 232 FHKSFSGTKQAGKVVVLDESMTFDQLEVDTEVLKLIRENKSSTREIAGVFGIPLHKFGIETA-N-MSITDANLD-YLSTL 308 (416) T ss_pred HHHHhcCccccCceeecCCCceeEeccCCHHHHHHHHHHHHHHHHHHHHhCCCHHHcCCCCC-C-ccHHHHHHH-HHHHH Confidence 99999999999999999999999999999999999999999999999999999999986432 2 345555554 56799 Q ss_pred HHHHHHHHHHHHhhhcchhhccceeeechhhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHHhCCCCCCccCceeeeccc Q lcl|Aclame:pro 319 AIPIARIQSAMDKYVGQYWVRKNRMKFDIDDVIQPDWEAKSESTQKMVNSGVATPNEGREIMGLPRSDDPKADELYANSA 398 (518) Q Consensus 319 ~P~~~~ie~~ln~~l~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~T~NE~R~~~g~~pi~~~~gD~~~~~~n 398 (518) +|++.+||++||++|++.. .+++++||++.+++.|.+++++.+++++++|+||+||+|+++|+||+++++++++++++| T Consensus 309 ~P~~~~ie~~ln~~l~~~~-~~~~~~f~~~~l~~~D~~~~~~~~~~~~~~G~~T~NE~R~~~gl~p~~~gd~~~~~~~~n 387 (416) T protein:vir:45 309 KPYITCVCAELNFKFNDEY-VNREFKFDTTEIRVVDEKTQAEIDKINIDSGKMNIDEIRQRDGLAPIPGGNGSIHRVDLN 387 (416) T ss_pred HHHHHHHHHHHhhhccccc-cCceEEEechhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCcceEeeccc Confidence 9999999999999998765 467899999999999999999999999999999999999999999999777778999999 Q ss_pred ccccccccccCCCCCCCCCCCCcccCCCCCccCCccc Q lcl|Aclame:pro 399 LQPLGATPDGAVEGEEAPAPKRPASTPVASLDQSPPA 435 (518) Q Consensus 399 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 435 (518) ++|++...+.... +. .....+..+.+ .++ T Consensus 388 ~~~~~~~~~~~~~-----~~-~~~~~~~kgGe--~n~ 416 (416) T protein:vir:45 388 HVNIELVDEYQMN-----KS-RATDKKLKGGE--ENE 416 (416) T ss_pred ccccccccccCcc-----cc-cccccccCCCC--CCC Confidence 9998865432111 00 00000111111 011 No 35 >protein:vir:81095 Length: 416 # NCBI annotation: portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:1891 # MgeName: tp310-1 # Cross-refs: genbank:acc:YP_001429872;genbank:gi:156603925;genbank:GeneID:5525315 Probab=100.00 E-value=1.1e-90 Score=513.81 Aligned_cols=413 Identities=17% Similarity=0.228 Sum_probs=331.8 Q ss_pred CCCCCCCCCcc-ccccccchhhhhhhccCccCCcccCccchhhHHHHhhhHHHHHHHHHHHHhhccCceEEEEecCCcee Q lcl|Aclame:pro 1 MLLANGQTLSA-PAMAELSPQMQDSYYYAPAVGMQLERQFSLYGGIYKNQPWVRTVIAKRAQALARLPVKCMFTSGDTET 79 (518) Q Consensus 1 ~~f~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~v~~ia~~ia~lp~~v~~~~~~~~~ 79 (518) =+|.+...... ........++...+++....+. .+....++++++|++||++||++||++||+++++ +.. T Consensus 2 g~f~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~al~~~~v~~cv~~Ia~~iA~~p~~~~~~---~~~ 72 (416) T protein:vir:81 2 GIFYKNEKRDLQYNEDDLQMMVQTLPGFQGTKLR------QYKDIEAIRHSDIFTAVMMIASDLARMPIRVTVN---GQI 72 (416) T ss_pred CcccccccccccCCCcchhHHHHHhccccccCcc------ccchhhhhcchHHHHHHHHHHHhhccCceEEecC---ccc Confidence 24444322111 1112223344433333322222 2344567899999999999999999999999863 345 Q ss_pred eecchHHHHHhhccCccCCHHHHHHHHHHHHHHcCCeeEEeeeCCCCceeeeeeeCCcceEEEeccCcceEEEEeeccCC Q lcl|Aclame:pro 80 EEHDTGYAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQKNKSGTPEKLMPMHPSRVAIKRNSRTGRYEYYFQAGAG 159 (518) Q Consensus 80 ~~~~~~~~~l~~~PN~~~t~~~f~~~~~~~~ll~G~~~~~i~~~~~G~~~~l~~l~p~~v~~~~~~~~~~~~~~~~~~~~ 159 (518) ...|+.+++|+.+||++||+++||+.++.+++++||+|++++++..|++++|||++|++|++..+.++...++.+..... T Consensus 73 ~~~~~~~~lL~~~PN~~~t~~~f~~~~~~~lll~Gna~~~i~r~~~G~~~~L~~i~~~~v~v~~~~~g~~~~~~~~~~~~ 152 (416) T protein:vir:81 73 NYSDRIVNLLNTRPNPMYNGYIFKLVVFVSALLTSHGYIEITRDKTGEPMNLTFRKTSEIELKSDARGRLYYFHQRIDSN 152 (416) T ss_pred cccchHHHHHhcccccCCCHHHHHHHHHHHHhhcCCeEEEEEECCCCcEEEEEEEcCceeEEEECCCccEEEEEEEecCC Confidence 56777888888999999999999999999999999999999999999999999999999999998776555444444444 Q ss_pred CCceeEEEeeeeeEEeecCCCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHccCCcceeeeeCCcCC-HHHHHHHHHH Q lcl|Aclame:pro 160 VGTQLVSFADDEVVPIRFFNPDGLERGLSLMESLKSTIFSEDSSRNATAAMWKNAGRPNLVLRHEKRLS-PEAQQRLREQ 238 (518) Q Consensus 160 ~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~p~gil~~~~~~~-~e~~~~~~~~ 238 (518) ..+..+.|++++|||||+++.++ ++|+||+..+..+++.+.++++++.++|+||++|+|||++++.++ +++++++++. T Consensus 153 ~~~~~~~~~~~evihir~~~~d~-~~G~s~i~~~~~~i~~~~~~~~~~~~~f~ng~~~~gil~~~~~~~~~~~~~~~~~~ 231 (416) T protein:vir:81 153 GNNIERNVKFEDMLDIKFYSLDG-INGLSLLDTLSRTIESDNNGKDFLNNFLRNGTHAGGILKMKGVLDNKKARDRAREE 231 (416) T ss_pred CceeEEEEccccEEEeccCCCCC-ccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCCcEEEEeCCCCCCHHHHHHHHHH Confidence 45566789999999999887665 689999999999999999999999999999999999999998874 6778999999 Q ss_pred HHHHhcCccccccceeccCCcccccccCChhhHHHHHHHHHHHHHHHHHhccchHhhccccccccccHHHHHHHHHHHHH Q lcl|Aclame:pro 239 FDRAHAGSSNTGKTMVVEEGMEPIPLQLTAVEMQFIEARQLNREEVCGVYDIAPPIVHILDRATFSNISAQMRAFYRDTM 318 (518) Q Consensus 239 ~~~~~~g~~n~g~~~vl~~g~~~~~~~~~~~d~q~~e~~~~~~~~Ia~~fgVpp~~lg~~~~~~~s~~e~~~~~~~~~~l 318 (518) |++.+.|..|+|+++|+++|++|++++.+++|+||+|.+++++++||++|||||.++|.... + ++.+++... +.+|| T Consensus 232 ~~~~~~g~~nag~~~vl~~g~~~~~l~~~~~d~q~~e~~~~~~~~Ia~~fgVPp~~lg~~~~-~-~~~~~~~~~-~~~~l 308 (416) T protein:vir:81 232 FHKSFSGTKQAGKVVVLDESMTFDQLEVDTEVLKLIRENKSSTREIAGVFGIPLHKFGIETA-N-MSITDANLD-YLSTL 308 (416) T ss_pred HHHHhcCccccCceeecCCCceeEeccCCHHHHHHHHHHHHHHHHHHHHhCCCHHHcCCCCC-C-ccHHHHHHH-HHHHH Confidence 99999999999999999999999999999999999999999999999999999999986432 2 345555554 56799 Q ss_pred HHHHHHHHHHHHhhhcchhhccceeeechhhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHHhCCCCCCccCceeeeccc Q lcl|Aclame:pro 319 AIPIARIQSAMDKYVGQYWVRKNRMKFDIDDVIQPDWEAKSESTQKMVNSGVATPNEGREIMGLPRSDDPKADELYANSA 398 (518) Q Consensus 319 ~P~~~~ie~~ln~~l~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~T~NE~R~~~g~~pi~~~~gD~~~~~~n 398 (518) +|++.+||++||++|++.. .+++++||++.+++.|.+++++.+++++++|+||+||+|+++|+||+++++++++++++| T Consensus 309 ~P~~~~ie~~ln~~l~~~~-~~~~~~f~~~~l~~~D~~~~~~~~~~~~~~G~~T~NE~R~~~gl~p~~~gd~~~~~~~~n 387 (416) T protein:vir:81 309 KPYITCVCAELNFKFNDEY-VNREFKFDTTEIRVVDEKTQAEIDKINIDSGKMNIDEIRQRDGLAPIPGGNGSIHRVDLN 387 (416) T ss_pred HHHHHHHHHHHhhhccccc-cCceEEEechhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCcceEeeccc Confidence 9999999999999998765 467899999999999999999999999999999999999999999999777778999999 Q ss_pred ccccccccccCCCCCCCCCCCCcccCCCCCccCCccc Q lcl|Aclame:pro 399 LQPLGATPDGAVEGEEAPAPKRPASTPVASLDQSPPA 435 (518) Q Consensus 399 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 435 (518) ++|++...+.... +. .....+..+.+ .++ T Consensus 388 ~~~~~~~~~~~~~-----~~-~~~~~~~kgGe--~n~ 416 (416) T protein:vir:81 388 HVNIELVDEYQMN-----KS-RATDKKLKGGE--ENE 416 (416) T ss_pred ccccccccccCcc-----cc-cccccccCCCC--CCC Confidence 9998865432111 00 00000111111 011 No 36 >protein:vir:8418 Length: 409 # NCBI annotation: gp13 # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:155 # MgeName: Omega # Cross-refs: genbank:acc:NP_818314;genbank:gi:29566750;genbank:GeneID:1260067 Probab=100.00 E-value=1e-90 Score=513.96 Aligned_cols=401 Identities=18% Similarity=0.240 Sum_probs=326.9 Q ss_pred CCCCCCCCCccccccccchhhhhhhccCccCCcccCccchhhHHHHhhhHHHHHHHHHHHHhhccCceEEEEecCCceee Q lcl|Aclame:pro 1 MLLANGQTLSAPAMAELSPQMQDSYYYAPAVGMQLERQFSLYGGIYKNQPWVRTVIAKRAQALARLPVKCMFTSGDTETE 80 (518) Q Consensus 1 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~v~~ia~~ia~lp~~v~~~~~~~~~~ 80 (518) -+|+++.+...... .. .+..........| ..++.+.++++++|++||++||++||++||+++++++++ +. T Consensus 6 ~~f~~~~~~~~~~~--~~-~~~~~~~~~~~~g------~~v~~~~al~~~~v~~~v~~ia~~iA~lp~~~~~~~~~~-~~ 75 (409) T protein:vir:84 6 RIFSGPSEERTLTK--IS-GIPSPAEDWAMHG------DRPGANSAMTLGAFYACVTLLADTVASLSIDAYRKKDNV-RI 75 (409) T ss_pred hhhcCCCccccccc--cc-ccccccchhhccC------cccchhhhhccHHHHHHHHHHHHhhhhCceEEEEecCCc-cc Confidence 36666543322211 11 1111111001111 223456788999999999999999999999999977554 34 Q ss_pred ecchHHHHHhhccCccCCHHHHHHHHHHHHHHcCCeeEEee-eCCCCceeeeeeeCCcceEEEeccCcceEEEEeeccCC Q lcl|Aclame:pro 81 EHDTGYAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQ-KNKSGTPEKLMPMHPSRVAIKRNSRTGRYEYYFQAGAG 159 (518) Q Consensus 81 ~~~~~~~~l~~~PN~~~t~~~f~~~~~~~~ll~G~~~~~i~-~~~~G~~~~l~~l~p~~v~~~~~~~~~~~~~~~~~~~~ 159 (518) ..|+.+++|+.+||++||+++||+.++.+++++||+|+++. ++..|++++|||++|++|++....+.....+.+... T Consensus 76 ~~~~l~~lL~~~PN~~~t~~~f~~~l~~~l~l~Gn~~~~i~~~~~~g~~~~L~~l~p~~v~v~~~~~~~~~~~~~~~~-- 153 (409) T protein:vir:84 76 PVSPAPKLLESTPYPGLTWFDWLWMLMESLAVTGNAFGYISARDEANRPTAIMPIHPDCIHVTDAKDEDGDWIEPVYR-- 153 (409) T ss_pred ccchHHHHhhccCCCCCCHHHHHHHHHHHHhhcCCeEEEEEEECCCCceEEEEEEcCceeEEEEcCCCcceEEEEEec-- Confidence 56777777888999999999999999999999999999886 677899999999999999988755543333332221 Q ss_pred CCceeEEEeeeeeEEeecCCCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHccCCcceeeeeCCcCCHHHHHHHHHHH Q lcl|Aclame:pro 160 VGTQLVSFADDEVVPIRFFNPDGLERGLSLMESLKSTIFSEDSSRNATAAMWKNAGRPNLVLRHEKRLSPEAQQRLREQF 239 (518) Q Consensus 160 ~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~p~gil~~~~~~~~e~~~~~~~~~ 239 (518) .++ ..|++++|||++++++++..+|+||+..+...|..+.++++++.++|+||++|+|+|++++.+++++++++++.| T Consensus 154 ~~g--~~~~~~dvih~~~~~~~~~~~G~s~i~~~~~~i~~~~~~~~~~~~~f~ng~~p~gil~~~~~l~~e~~~~~~~~~ 231 (409) T protein:vir:84 154 IDG--KVVPNHRIMHIKRYPVAGCALGMSPIEKAASAIGLGLAAERYGLRWFRDSANPSGILSSDADLTPDQVKQTQKQW 231 (409) T ss_pred CCc--eEEchhhEEEecCCCCCcccccccHHHHHHHHHHHHHHHHHHHHHHHhcCCCccEEEecCCCCCHHHHHHHHHHH Confidence 122 458999999999999999889999999999999999999999999999999999999999999999999999999 Q ss_pred HHHhcCccccccceeccCCcccccccCChhhHHHHHHHHHHHHHHHHHhccchHhhccccccc--cccHHHHHHHHHHHH Q lcl|Aclame:pro 240 DRAHAGSSNTGKTMVVEEGMEPIPLQLTAVEMQFIEARQLNREEVCGVYDIAPPIVHILDRAT--FSNISAQMRAFYRDT 317 (518) Q Consensus 240 ~~~~~g~~n~g~~~vl~~g~~~~~~~~~~~d~q~~e~~~~~~~~Ia~~fgVpp~~lg~~~~~~--~s~~e~~~~~~~~~~ 317 (518) .+.+ .|+|+++|+++|++|++++.++.|+||+|++++++++||++|||||++||+.+.++ ++|+|++.+.|+++| T Consensus 232 ~~~~---~n~g~~~vl~~g~~~~~~~~~~~d~q~~e~~~~~~~~Ia~~fgVPp~~lg~~~~~~~~~sn~e~~~~~f~~~~ 308 (409) T protein:vir:84 232 IQSH---HNRRLPAVMSAGIKWQSVSITPNESQFLETRSFQRSEIAMWFRIPPHMIGDVEKSTSWGTGIEEQGINFVRHT 308 (409) T ss_pred HHHh---ccCCCeeecCCCceEEEccCChhHHHHHHHHHHHHHHHHHHhCCCHHHhCCCCCcccccchHHHHHHHHHHHH Confidence 8876 46789999999999999999999999999999999999999999999999876655 488999999999999 Q ss_pred HHHHHHHHHHHHHhhhcchhhccceeeechhhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHHhCCCCCCccCceeeecc Q lcl|Aclame:pro 318 MAIPIARIQSAMDKYVGQYWVRKNRMKFDIDDVIQPDWEAKSESTQKMVNSGVATPNEGREIMGLPRSDDPKADELYANS 397 (518) Q Consensus 318 l~P~~~~ie~~ln~~l~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~T~NE~R~~~g~~pi~~~~gD~~~~~~ 397 (518) |.||++.||++||++|. .+++++||++.++++|.+++++.+.+++++|++|+||+|+++|+||++ |||++++|+ T Consensus 309 l~P~~~~ie~~l~~~L~----~g~~i~fd~~~l~~~d~~~~~~~~~~~~~~G~~t~NE~R~~~g~~p~~--ggD~~~~~~ 382 (409) T protein:vir:84 309 LLPWLRCIEQALDTFLP----RGQFVKFNVDGLMRGDVTARFTAYQMGLQNGIWSVNEVRAWEDAPPIP--EGDIHLQPM 382 (409) T ss_pred HHHHHHHHHHHHHHhcc----CCCeEEEechhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCC--Ccceeeecc Confidence 99999999999999883 467899999999999999999999999999999999999999999996 799999999 Q ss_pred cccccccccccCCCCCCCCCCCCcccCCCCCccCC Q lcl|Aclame:pro 398 ALQPLGATPDGAVEGEEAPAPKRPASTPVASLDQS 432 (518) Q Consensus 398 n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 432 (518) |++|++.........++. +.+ ...+.+ T Consensus 383 n~~~~~~~~~~~~~~~~~-----~~~---~~~gn~ 409 (409) T protein:vir:84 383 NFVPLGYVPPEEPAQEPQ-----PNS---ATEGNK 409 (409) T ss_pred cccccccCCccccCcCCC-----CCC---ccCCCC Confidence 999988654332211111 100 000000 No 37 >protein:vir:2683 Length: 412 # NCBI annotation: portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:57 # MgeName: phiSLT # Cross-refs: genbank:acc:NP_075502;genbank:gi:12719431;genbank:GeneID:920150 Probab=100.00 E-value=7.4e-91 Score=514.72 Aligned_cols=408 Identities=17% Similarity=0.230 Sum_probs=337.3 Q ss_pred CCCCCCCCCccccc-cccchhhhhhhccCcc-CCcccCccchhhHHHHhhhHHHHHHHHHHHHhhccCceEEEEecCCce Q lcl|Aclame:pro 1 MLLANGQTLSAPAM-AELSPQMQDSYYYAPA-VGMQLERQFSLYGGIYKNQPWVRTVIAKRAQALARLPVKCMFTSGDTE 78 (518) Q Consensus 1 ~~f~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~v~~~v~~ia~~ia~lp~~v~~~~~~~~ 78 (518) |=|-+++....... .....|+......... .++.......++...++++++|++||++||++||++||+++++++ T Consensus 1 m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~a~~~~~v~~~i~~ia~~iA~lp~~~~~~~~--- 77 (412) T protein:vir:26 1 MNVIAKENIVTRIKKKLIDNWIDQSTSKLYDFSPWKNRSFWGVINNTLETNETIFSAITKLSNSMASLPLKMYEDYK--- 77 (412) T ss_pred CccchhhhhhhhhhhhHhhhhhcccccccccccccCCccccccchhhhhccHHHHHHHHHHHHhHhhCceeEeeccc--- Confidence 77776633322211 1122333222221111 111111223355678999999999999999999999999998653 Q ss_pred eeecchHHHHHhhccCccCCHHHHHHHHHHHHHHcCCeeEEeeeCCCCceeeeeeeCCcceEEEeccCcceEEEEeeccC Q lcl|Aclame:pro 79 TEEHDTGYAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQKNKSGTPEKLMPMHPSRVAIKRNSRTGRYEYYFQAGA 158 (518) Q Consensus 79 ~~~~~~~~~~l~~~PN~~~t~~~f~~~~~~~~ll~G~~~~~i~~~~~G~~~~l~~l~p~~v~~~~~~~~~~~~~~~~~~~ 158 (518) ..+|+..++|+.+||++||+++||+.++.+++++||+|++++|+..|++++|+|++|+.|++..+.+++.++|.+... T Consensus 78 -~~~~~~~~lL~~~PN~~~t~~~f~~~~~~~lll~Gnay~~i~r~~~G~~~~L~~l~~~~v~v~~~~~~~~~~y~~~~~- 155 (412) T protein:vir:26 78 -VVNTEVSDLLTVSPNNSLSSFDFINQIETIRNEKGNAYVLIERDIYHQPSKLFLLNPDVVEMLIENQSRELYYSIHAA- 155 (412) T ss_pred -cccchHHHHHHhhcccCCCHHHHHHHHHHHHhhcCceEEEEEECCCCcEEEEEEEcCceeEEEEeCCCcEEEEEEEcC- Confidence 345667777888999999999999999999999999999999999999999999999999999998888888877543 Q ss_pred CCCceeEEEeeeeeEEeecCCCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHccCCcceeeeeCCcCCHHHHHHHHHH Q lcl|Aclame:pro 159 GVGTQLVSFADDEVVPIRFFNPDGLERGLSLMESLKSTIFSEDSSRNATAAMWKNAGRPNLVLRHEKRLSPEAQQRLREQ 238 (518) Q Consensus 159 ~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~p~gil~~~~~~~~e~~~~~~~~ 238 (518) ++..+.|++++||||+++++.+.++|+||+..+...+..+.+++++. ++.++..++++++.+..+++++++++++. T Consensus 156 --~g~~~~~~~~evih~~~~~~~~~~~G~s~i~~~~~~i~~~~a~~~~~--~~~~~~~~~~i~~~~~~l~~e~~~~~~~~ 231 (412) T protein:vir:26 156 --TGNKLIVHNMDMLHFKHIVASNMVQGISPIDVLKNTTDFDNAVRTFN--LTEMQKPDSFMLKYGSNVGKEKRQQVLED 231 (412) T ss_pred --CceEEEEccccEEEeCCCCCCCCcccccHHHHHHHHHHHHHHHHHHH--HHhcCCCCceEEecCCCCCHHHHHHHHHH Confidence 34567899999999999877778899999999999999999998884 66666677888899999999999999999 Q ss_pred HHHHhcCccccccceeccCCcccccccCChhhHHHHHHHHHHHHHHHHHhccchHhhccccccccccHHHHHHHHHHHHH Q lcl|Aclame:pro 239 FDRAHAGSSNTGKTMVVEEGMEPIPLQLTAVEMQFIEARQLNREEVCGVYDIAPPIVHILDRATFSNISAQMRAFYRDTM 318 (518) Q Consensus 239 ~~~~~~g~~n~g~~~vl~~g~~~~~~~~~~~d~q~~e~~~~~~~~Ia~~fgVpp~~lg~~~~~~~s~~e~~~~~~~~~~l 318 (518) |++.+. ++|+++|+++|++|+++++++.|+||+|.+++++++||++|||||.+||..++++++|.|++.+.|+++|| T Consensus 232 ~~~~~~---~~g~~~vl~~g~~~~~l~~~~~d~q~~e~~~~~~~~Ia~afgVPp~~lg~~~~~~~sn~e~~~~~f~~~~l 308 (412) T protein:vir:26 232 FKQYYE---ENGGILFQEPGVEIEPLPKKYVSEDIVASENLTRERVANVFQLPSVFLNARSNTNFAKNEELNRFYLQHTL 308 (412) T ss_pred HHHHhh---cCCCeeecCCCceEEEcCCChhHHHHHHHHHHHHHHHHHHhCCCHHHhCCCCCCCcccHHHHHHHHHHHHH Confidence 998764 56889999999999999999999999999999999999999999999999988999999999999999999 Q ss_pred HHHHHHHHHHHHhhhcchhhc--cceeeechhhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHHhCCCCCCccCceeeec Q lcl|Aclame:pro 319 AIPIARIQSAMDKYVGQYWVR--KNRMKFDIDDVIQPDWEAKSESTQKMVNSGVATPNEGREIMGLPRSDDPKADELYAN 396 (518) Q Consensus 319 ~P~~~~ie~~ln~~l~~~~~~--~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~T~NE~R~~~g~~pi~~~~gD~~~~~ 396 (518) .||+.+||++||++|++..+. +++++||++.+++.|.+++++.+++++++|++|+||+|+++|+||++ |||+++++ T Consensus 309 ~P~~~~ie~~ln~kLl~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~G~~t~NE~R~~~gl~p~~--ggD~~~~~ 386 (412) T protein:vir:26 309 LPIVKQYEEEFNRKLLTKTDREKNRYFKFNVKSYLRADSATQAEVYFKAVRSGYYTINDIREWEDLPPVE--GGDKPLIS 386 (412) T ss_pred HHHHHHHHHHHHhhcCCcccccCcceEEeechhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCC--CcCeeeec Confidence 999999999999999987653 67899999999999999999999999999999999999999999996 89999999 Q ss_pred ccccccccccccCCCCCCCCCCCCcccCCCCCccCCcccc Q lcl|Aclame:pro 397 SALQPLGATPDGAVEGEEAPAPKRPASTPVASLDQSPPAS 436 (518) Q Consensus 397 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 436 (518) +|++|++......... + .++ +..++. T Consensus 387 ~n~~~~~~~~~~~~~~----~--------gG~--~n~~e~ 412 (412) T protein:vir:26 387 GDLYPIDTPLELRKSL----K--------GGD--KNVNES 412 (412) T ss_pred ccccccccchhhcccc----c--------CCC--CCcCCC Confidence 9999987643322110 0 000 000000 No 38 >protein:vir:93943 Length: 409 # NCBI annotation: ORF010 # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:1485 # MgeName: 3A # Cross-refs: genbank:acc:YP_239936;genbank:gi:66395598;genbank:GeneID:5131009 Probab=100.00 E-value=9.3e-91 Score=514.17 Aligned_cols=402 Identities=17% Similarity=0.231 Sum_probs=332.0 Q ss_pred CCCCCCCCCccccccccchhhhhhhccCc-cCCcccCccchhhHHHHhhhHHHHHHHHHHHHhhccCceEEEEecCCcee Q lcl|Aclame:pro 1 MLLANGQTLSAPAMAELSPQMQDSYYYAP-AVGMQLERQFSLYGGIYKNQPWVRTVIAKRAQALARLPVKCMFTSGDTET 79 (518) Q Consensus 1 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~v~~~v~~ia~~ia~lp~~v~~~~~~~~~ 79 (518) -+++|..+. ..+.|+........ ..++.......+..+.++++++|++||++||++||++|++++++++ T Consensus 5 ~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~V~~ci~~Ia~~ia~lp~~~~~~~~---- 74 (409) T protein:vir:93 5 NIVTRIKKK------LIDNWIDQSTSKLYDFSPWKNRSFWGVINNTLETNETIFSAITKLSNSMASLPLKMYEDYK---- 74 (409) T ss_pred chhhhhhhh------hhhhhhccccccccccccccCccccccchhhhhccHHHHHHHHHHHHhhhhCceeEeeccc---- Confidence 233332221 12222221111110 1111111122345577899999999999999999999999998653 Q ss_pred eecchHHHHHhhccCccCCHHHHHHHHHHHHHHcCCeeEEeeeCCCCceeeeeeeCCcceEEEeccCcceEEEEeeccCC Q lcl|Aclame:pro 80 EEHDTGYAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQKNKSGTPEKLMPMHPSRVAIKRNSRTGRYEYYFQAGAG 159 (518) Q Consensus 80 ~~~~~~~~~l~~~PN~~~t~~~f~~~~~~~~ll~G~~~~~i~~~~~G~~~~l~~l~p~~v~~~~~~~~~~~~~~~~~~~~ 159 (518) ..+|+.+++|+.+||++||+++||+.++.+++++||+|++++++..|++++|||++|++|++..+.+++.++|.+... T Consensus 75 ~~~~~~~~lL~~~PN~~~t~~~f~~~~~~~lll~Gnay~~i~r~~~G~~~~L~~l~~~~v~~~~~~~~~~~~y~~~~~-- 152 (409) T protein:vir:93 75 VVNTEVSDLLTVSPNNSLSSFDFINQIETIRNEKGNAYVLIERDIYHQPSKLFLLNPDVVEMLIENQSRELYYSIHAA-- 152 (409) T ss_pred cccchHHHHHhhhcccCCCHHHHHHHHHHHHhhcCceEEEEEECCCCcEEEEEEEcCceeEEEEeCCCcEEEEEEEcC-- Confidence 345677778889999999999999999999999999999999999999999999999999999988888888877543 Q ss_pred CCceeEEEeeeeeEEeecCCCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHccCCcceeeeeCCcCCHHHHHHHHHHH Q lcl|Aclame:pro 160 VGTQLVSFADDEVVPIRFFNPDGLERGLSLMESLKSTIFSEDSSRNATAAMWKNAGRPNLVLRHEKRLSPEAQQRLREQF 239 (518) Q Consensus 160 ~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~p~gil~~~~~~~~e~~~~~~~~~ 239 (518) ++..+.|++++||||+++++.+.++|+||+..+...+..+.+++++. ++.++..++++++.+..+++++++++++.| T Consensus 153 -~g~~~~~~~~eVih~r~~~~~~~~~G~s~i~~~~~~i~~~~~~~~~~--~~~~~~~~~~i~~~~~~l~~e~~~~~~~~~ 229 (409) T protein:vir:93 153 -TGNKLIVHNMDMLHFKHIVASNMVQGISPIDVLKNTTDFDNAVRTFN--LTEMQKPDSFMLKYGSNVGKEKRQQVLEDF 229 (409) T ss_pred -CceEEEEccccEEEeCCCCCCCccccccHHHHHHHHHHHHHHHHHHH--HHhcCCCCceEEecCCCCCHHHHHHHHHHH Confidence 34567899999999999877778899999999999999999998874 666666778889999999999999999999 Q ss_pred HHHhcCccccccceeccCCcccccccCChhhHHHHHHHHHHHHHHHHHhccchHhhccccccccccHHHHHHHHHHHHHH Q lcl|Aclame:pro 240 DRAHAGSSNTGKTMVVEEGMEPIPLQLTAVEMQFIEARQLNREEVCGVYDIAPPIVHILDRATFSNISAQMRAFYRDTMA 319 (518) Q Consensus 240 ~~~~~g~~n~g~~~vl~~g~~~~~~~~~~~d~q~~e~~~~~~~~Ia~~fgVpp~~lg~~~~~~~s~~e~~~~~~~~~~l~ 319 (518) ++.+. ++|+++++++|++|+++++++.|+||+|.+++++++||++|||||++||..++++++|+|++.+.|+++||+ T Consensus 230 ~~~~~---~~g~~~vl~~g~~~~~l~~~~~d~q~~e~r~~~~~~Ia~~fgVPp~~lg~~~~~~~sn~e~~~~~f~~~~l~ 306 (409) T protein:vir:93 230 KQYYE---ENGGILFQEPGVEIEPLPKKYVSEDIVASENLTRERVANVFQLPSVFLNARSNTNFAKNEELNRFYLQHTLL 306 (409) T ss_pred HHHhh---cCCCeeecCCCceEEEcCCChhHHHHHHHHHHHHHHHHHHhCCCHHHhCCCCCCCcccHHHHHHHHHHHHHH Confidence 98774 578999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred HHHHHHHHHHHhhhcchhhc--cceeeechhhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHHhCCCCCCccCceeeecc Q lcl|Aclame:pro 320 IPIARIQSAMDKYVGQYWVR--KNRMKFDIDDVIQPDWEAKSESTQKMVNSGVATPNEGREIMGLPRSDDPKADELYANS 397 (518) Q Consensus 320 P~~~~ie~~ln~~l~~~~~~--~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~T~NE~R~~~g~~pi~~~~gD~~~~~~ 397 (518) |++++||++||++|++..+. +++++||++.+++.|.+++++.+++++++|++|+||+|+++|+||++ |||++++++ T Consensus 307 P~~~~ie~~l~~~Ll~~~~~~~~~~~~fd~~~ll~~d~~~~~~~~~~~~~~G~~T~NE~R~~~g~~p~~--ggD~~~~~~ 384 (409) T protein:vir:93 307 PIVKQYEEEFNRKLLTKTDREKNRYFKFNVKSYLRADSATQAEVYFKAVRSGYYTINDIREWEDLPPVE--GGDKPLISG 384 (409) T ss_pred HHHHHHHHHHHhhcCCcccccCcceEEeechhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCC--CcCeeeecc Confidence 99999999999999987653 57899999999999999999999999999999999999999999995 899999999 Q ss_pred cccccccccccCCCCCCCCCCCCcccCCCCCccCCcccc Q lcl|Aclame:pro 398 ALQPLGATPDGAVEGEEAPAPKRPASTPVASLDQSPPAS 436 (518) Q Consensus 398 n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 436 (518) |++|++......... . +.+++.++. T Consensus 385 n~~~~~~~~~~~~~~----~----------gG~~n~~e~ 409 (409) T protein:vir:93 385 DLYPIDTPLELRKSL----K----------GGDKNVNES 409 (409) T ss_pred cccccccchhhcccc----c----------CCCCCcCCC Confidence 999997654332110 0 000000000 No 39 >protein:vir:102727 Length: 945 # NCBI annotation: portal protein # Family: family:all:2446 # MgeID: mge:1610 # MgeName: YS40 # Cross-refs: genbank:acc:YP_874016;genbank:gi:118197623;genbank:GeneID:4495919 Probab=100.00 E-value=2.9e-89 Score=505.99 Aligned_cols=506 Identities=15% Similarity=0.162 Sum_probs=353.0 Q ss_pred CCCCCCCC-----CccccccccchhhhhhhccCccCCcccC--------ccchhhHHHHhhhHHHHHHHHHHHHhhccCc Q lcl|Aclame:pro 1 MLLANGQT-----LSAPAMAELSPQMQDSYYYAPAVGMQLE--------RQFSLYGGIYKNQPWVRTVIAKRAQALARLP 67 (518) Q Consensus 1 ~~f~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~v~~~v~~ia~~ia~lp 67 (518) .+|...+. ...|=.....+|...+|...+.....++ ....++...++++++|++||++||++||++| T Consensus 63 ~~~~~~~~~kk~~i~~pfkkk~~~~~~d~f~~s~es~s~vtsls~pdaf~~vnVs~~~AlknsaV~scI~~IA~sIAsLP 142 (945) T protein:vir:10 63 IIFRKNQVLKKEKIIVPYNHQEPPFKFNLFEYSPESLMYLPSISDPDAFFLINLFRKYRFNNDSKLIKVSEIPKKLTSKE 142 (945) T ss_pred eeehhhhHHHhhcccccccccccchhhhhhhccCccceecccccCccceeeehhhhhhhhccHHHHHHHHHHHhhhccCc Confidence 56654333 2222111223455554443332211111 1134567888999999999999999999999 Q ss_pred eEEEEecCCce------eeecchHHHHHhhccCccCCHHH----HHHHHHHHHHHcCCeeEEeeeCCCCceeeeeeeCCc Q lcl|Aclame:pro 68 VKCMFTSGDTE------TEEHDTGYAKLLADPCEYLDPFA----FWEWVASTLDIYGETYLAIQKNKSGTPEKLMPMHPS 137 (518) Q Consensus 68 ~~v~~~~~~~~------~~~~~~~~~~l~~~PN~~~t~~~----f~~~~~~~~ll~G~~~~~i~~~~~G~~~~l~~l~p~ 137 (518) +++|++.+++. +...+|+++.|+.+||++||+++ |+++++.+++++||+|++++|+.+|++++|+|++|. T Consensus 143 lklYrr~edG~~~~~~kk~~~~hpL~~LL~rPNp~mT~~eFwqsFl~~Lv~dLLL~GNAYieIiRd~~G~ii~L~pLdPs 222 (945) T protein:vir:10 143 LEIYKHIEDKHVNYYLKRIRDARNILEFLERPDPYFSEVNSWEYLLGMVLDDILTIDRGAIVKIRDEQGNLVAITPVDGT 222 (945) T ss_pred eEEEEecccCcccccccccccchHHHHHHhCCCcccChhHHHHHHHHHHHHHHhhcCCeEEEEEECCCCcEEEEEEECCc Confidence 99999876653 23456777888889999999998 556788999999999999999999999999999999 Q ss_pred ceEEEeccCcceEEEEeeccCCCCceeEEEeeeeeE-EeecCCCCccc--ccchHHHHHHHHHHHHHHHHHHHHHHHH-c Q lcl|Aclame:pro 138 RVAIKRNSRTGRYEYYFQAGAGVGTQLVSFADDEVV-PIRFFNPDGLE--RGLSLMESLKSTIFSEDSSRNATAAMWK-N 213 (518) Q Consensus 138 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi-h~~~~~~~~~~--~G~s~~~~~~~~i~~~~~~~~~~~~~~~-n 213 (518) +|++..+.+++..++.+... .+.....+++.++| |++++++++.. +|+||+.+++.++..+.++++++.++|. | T Consensus 223 ~Vti~~ddDG~~~y~Yv~~i--dG~~~~~v~a~DvIlhirn~s~DG~~~GyGlSPIeaa~~aI~~alAaek~aar~FskN 300 (945) T protein:vir:10 223 TIKPILSEDTGIVVGYVQEV--DGAIVAHFDKRDVVLFRQNLTPDVYMYGYSLPPIEILYKVILSDIFIDKGNLDYYRKG 300 (945) T ss_pred ceEEEEcCCCcEEEEEEEec--CCceEEEecCCceEEEeccCCCCcccccCCchHHHHHHHHHHHHHHHHHHHHHHHHhC Confidence 99999988776654333222 23344567777765 66777777643 6999999999999999999999999995 7 Q ss_pred cCCcceeeeeC----------CcCCHHHHHHHHHHHHHHhcCccccccceeccCCcccccccCChhhHHHHHHHHHHHHH Q lcl|Aclame:pro 214 AGRPNLVLRHE----------KRLSPEAQQRLREQFDRAHAGSSNTGKTMVVEEGMEPIPLQLTAVEMQFIEARQLNREE 283 (518) Q Consensus 214 g~~p~gil~~~----------~~~~~e~~~~~~~~~~~~~~g~~n~g~~~vl~~g~~~~~~~~~~~d~q~~e~~~~~~~~ 283 (518) |++|+|+|+++ ..+++++++++++.|++.++| .|+|+++++++|++|++++.++.|+||+|++++++++ T Consensus 301 Ga~PsGILsvkg~~~~d~k~~~~LseEq~erlKe~wee~~sG-~NnG~piVLdeGmef~pLs~s~~DaQfLEsrkfs~ee 379 (945) T protein:vir:10 301 GSIPEGILAIEPPSYKEGDIYPQLSREQLESIQRQLQAIMMG-DYTQVPILSGGKFTWIDFKGKRRDMQFKELAEFVARK 379 (945) T ss_pred CCccceEEEecCccccccccccccCHHHHHHHHHHHHHHhCC-cccccceecCCCceEEEccCChhHHHHHHHHHHHHHH Confidence 88999999764 557899999999999999988 5678899999999999999999999999999999999 Q ss_pred HHHHhccchHhhccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHhhhcchhhccceeeechhhhhccCHHHHHHHHH Q lcl|Aclame:pro 284 VCGVYDIAPPIVHILDRATFSNISAQMRAFYRDTMAIPIARIQSAMDKYVGQYWVRKNRMKFDIDDVIQPDWEAKSESTQ 363 (518) Q Consensus 284 Ia~~fgVpp~~lg~~~~~~~s~~e~~~~~~~~~~l~P~~~~ie~~ln~~l~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~ 363 (518) ||++|||||++||+.++++++|++++...|+++||+|++.+||++||++|++... +..++|+++.+...|.+++++.++ T Consensus 380 IArAFGVPP~lLG~~e~st~SNiEqq~~~Fv~~tL~Pil~~IEqeLNrkLl~~~e-g~~i~fdFd~ldl~D~ksraEal~ 458 (945) T protein:vir:10 380 ICAVYQVSPQDVGILEGSNKATAEVMASLTKAKGLEPLMATISKGFDEVVSEFRN-EKDIKLWFKEDDLEKERDWWNIIQ 458 (945) T ss_pred HHHHhCCCHHHcccCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccc-CceeEEEecchhccCHHHHHHHHH Confidence 9999999999999999999999999999999999999999999999999876433 334556666666789999999999 Q ss_pred HHHhCCCcCHHHHHHHHhCCCCCCccCceeeecc-cccccccccccCCCCCCCCCCCCcccCCCCCccCCc----ccccc Q lcl|Aclame:pro 364 KMVNSGVATPNEGREIMGLPRSDDPKADELYANS-ALQPLGATPDGAVEGEEAPAPKRPASTPVASLDQSP----PASVP 438 (518) Q Consensus 364 ~~~~~g~~T~NE~R~~~g~~pi~~~~gD~~~~~~-n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~ 438 (518) +++++|+||+||+|+++|+||++ |||+++++. ++.|.+....+.....+....+...+++....++.. ..... T Consensus 459 kli~sGiLTiNEvRe~lGLpPIe--GGD~lli~~nn~~P~d~~~ka~~ga~p~q~aq~~~dqp~~kGGe~dEns~~psE~ 536 (945) T protein:vir:10 459 GQLNTGFRSINEARMEKGLEPVP--WGDVPFSGLRNWKPEDEQAKAQQGAMPPQLAQAMADQPSQQGGGVDENSSVPSEQ 536 (945) T ss_pred HHHhCCCcCHHHHHHHhCCCCCC--CcceeeeccccccccccccccccCCCCcccccCCCCCCCCCCCCCCCCCCCCCcc Confidence 99999999999999999999996 899999987 566776554443332222221121222221111111 11111 Q ss_pred ccChhh-h----cchhHHHHHHHHHHhhccCcchhHHHHHHHHHHHhhhhhhhcccccchhhhhhh-HHHHHHHHHHHHh Q lcl|Aclame:pro 439 GLSPTN-S----DRSTDSGKTEPRRLMQKPPPKESSPKHLRAVKGAMGRGKDIKGFALQLAEKYPD-DLEDILLAVQLAL 512 (518) Q Consensus 439 ~~~~~~-~----~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 512 (518) +....+ . .+.+......++.++ .-.+.|++.++++.++.++...- +++ .. |=... .-+|+....-.-| T Consensus 537 kda~~e~~~~l~~~~~~~a~e~i~~~~-e~~~~~~~~~~~~~~~~~~~~~~-~~~--~~--~~~~~~~~~~~~~~~~~~~ 610 (945) T protein:vir:10 537 KNAGLEVLRNLFKSLDANASENLKQVI-ELTNDDNYLKEKELLTRVLKSVG-LDS--VS--EFIENNSQTDVEVSAKDIL 610 (945) T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHH-hhcCCCchhHHHHHHHHHHHHhh-hHH--HH--HHHhcCCccceeechhhhh Confidence 111111 0 111111112222222 33356677777777776665531 111 00 00000 0011111111111 Q ss_pred hhcccC Q lcl|Aclame:pro 513 AERKDN 518 (518) Q Consensus 513 ~~~~~~ 518 (518) +=--++ T Consensus 611 ~~~~~~ 616 (945) T protein:vir:10 611 SFKYNS 616 (945) T ss_pred hhhhhh Confidence 100011 No 40 >protein:vir:94426 Length: 409 # NCBI annotation: ORF009 # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:1506 # MgeName: 47 # Cross-refs: genbank:acc:YP_240003;genbank:gi:66395665;genbank:GeneID:5133086 Probab=100.00 E-value=2.3e-90 Score=512.06 Aligned_cols=402 Identities=17% Similarity=0.233 Sum_probs=333.6 Q ss_pred CCCCCCCCCccccccccchhhhhhhccCc-cCCcccCccchhhHHHHhhhHHHHHHHHHHHHhhccCceEEEEecCCcee Q lcl|Aclame:pro 1 MLLANGQTLSAPAMAELSPQMQDSYYYAP-AVGMQLERQFSLYGGIYKNQPWVRTVIAKRAQALARLPVKCMFTSGDTET 79 (518) Q Consensus 1 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~v~~~v~~ia~~ia~lp~~v~~~~~~~~~ 79 (518) -+|++.++ .....|+...+.... ..++.......+..+.|+++++|++||++||++||++|++++++++ T Consensus 5 ~~~~~~k~------~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~a~~~~~v~~~i~~Ia~~ia~lp~~~~~~~~---- 74 (409) T protein:vir:94 5 NIVTRIKK------KLIDNWIDQSASKLYDFSPWKNKSFWGVINNTLETNETIFSAITKLSNSMASLPLKMYEDYK---- 74 (409) T ss_pred ccchhhhh------HHhhhhhcCCcccccccccccCccccccchhhhhccHHHHHHHHHHHHhhhhCceeEeeccc---- Confidence 34444332 222233322222111 0111111122345677999999999999999999999999998653 Q ss_pred eecchHHHHHhhccCccCCHHHHHHHHHHHHHHcCCeeEEeeeCCCCceeeeeeeCCcceEEEeccCcceEEEEeeccCC Q lcl|Aclame:pro 80 EEHDTGYAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQKNKSGTPEKLMPMHPSRVAIKRNSRTGRYEYYFQAGAG 159 (518) Q Consensus 80 ~~~~~~~~~l~~~PN~~~t~~~f~~~~~~~~ll~G~~~~~i~~~~~G~~~~l~~l~p~~v~~~~~~~~~~~~~~~~~~~~ 159 (518) ..+|+.+++|+.+||++||+++||+.++.+++++||+|++++++.+|++++|||++|++|++..+.+++.++|.+... T Consensus 75 ~~~~~~~~lL~~~PN~~~t~~~f~~~~~~~lll~Gnay~~i~r~~~G~~~~L~~l~~~~v~v~~~~~~~~~~y~~~~~-- 152 (409) T protein:vir:94 75 VVNTEVSDLLTVSPNNSLSSFDFINQIETIRNEKGNAYVLIERDIYHQPSKLFLLNPDVVEMLIENQSRELYYSIHAA-- 152 (409) T ss_pred ccchhHHHHHhhhcccCCCHHHHHHHHHHHHhhcCCeEEEEEECCCCcEEEEEEEcCceeEEEEeCCCcEEEEEEEcC-- Confidence 345667778888999999999999999999999999999999999999999999999999999988888888877543 Q ss_pred CCceeEEEeeeeeEEeecCCCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHccCCcceeeeeCCcCCHHHHHHHHHHH Q lcl|Aclame:pro 160 VGTQLVSFADDEVVPIRFFNPDGLERGLSLMESLKSTIFSEDSSRNATAAMWKNAGRPNLVLRHEKRLSPEAQQRLREQF 239 (518) Q Consensus 160 ~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~p~gil~~~~~~~~e~~~~~~~~~ 239 (518) ++..+.|++++|||||++++.+.++|+||+..+...++...+++++. ++.++..++++++.+..+++++++++++.| T Consensus 153 -~g~~~~~~~~dvih~r~~~~~~~~~G~s~l~~~~~~i~~~~~~~~~~--~~~~~~~~~~i~~~~~~l~~e~~~~~~~~~ 229 (409) T protein:vir:94 153 -TGNKLIVHNMDMLHFKHIVASNMVQGISPIDVLKNTTDFDNAVRTFN--LTEMQKPDSFMLKYGSNVGKEKRQQVLEDF 229 (409) T ss_pred -CceEEEEccccEEEecCCCCCCccccccHHHHHHHHHHHHHHHHHHH--HHhcCCCCeeEEecCCCCCHHHHHHHHHHH Confidence 35567899999999999877778899999999999999999998874 566666778889999999999999999999 Q ss_pred HHHhcCccccccceeccCCcccccccCChhhHHHHHHHHHHHHHHHHHhccchHhhccccccccccHHHHHHHHHHHHHH Q lcl|Aclame:pro 240 DRAHAGSSNTGKTMVVEEGMEPIPLQLTAVEMQFIEARQLNREEVCGVYDIAPPIVHILDRATFSNISAQMRAFYRDTMA 319 (518) Q Consensus 240 ~~~~~g~~n~g~~~vl~~g~~~~~~~~~~~d~q~~e~~~~~~~~Ia~~fgVpp~~lg~~~~~~~s~~e~~~~~~~~~~l~ 319 (518) ++.+. ++|+++++++|++|++++++++|+||+|.+++++++||++|||||++||..++++++|+|++.+.|+++||. T Consensus 230 ~~~~~---~~g~~~vl~~g~~~~~l~~~~~d~q~~e~~~~~~~~Ia~~fgVPp~~lg~~~~~~~sn~e~~~~~f~~~~l~ 306 (409) T protein:vir:94 230 KQYYE---ENGGILFQEPGVEIEPLPKKYVSEDIVASENLTRERVANVFQLPSVFLNARSNTNFAKNEELNRFYLQHTLL 306 (409) T ss_pred HHHhh---cCCCeeecCCCceEEEcCCChhHHHHHHHHHHHHHHHHHHhCCCHHHhCCCCCCCcccHHHHHHHHHHHHHH Confidence 99874 578999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred HHHHHHHHHHHhhhcchhhc--cceeeechhhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHHhCCCCCCccCceeeecc Q lcl|Aclame:pro 320 IPIARIQSAMDKYVGQYWVR--KNRMKFDIDDVIQPDWEAKSESTQKMVNSGVATPNEGREIMGLPRSDDPKADELYANS 397 (518) Q Consensus 320 P~~~~ie~~ln~~l~~~~~~--~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~T~NE~R~~~g~~pi~~~~gD~~~~~~ 397 (518) |+++.||++||++|++..+. +++++||++.+++.|.+++++.+++++++|++|+||+|+++|+||++ |||++++++ T Consensus 307 P~~~~ie~~ln~~Ll~~~~~~~~~~i~fd~~~ll~~d~~~~~~~~~~~~~~G~~T~NE~R~~~g~~p~~--ggD~~~~~~ 384 (409) T protein:vir:94 307 PIVKQYEEEFNRKLLTKTDREKNRYFKFNVKSYLRADSATQAEVYFKAVRSGYYTINDIREWEDLPPVE--GGDKPLISG 384 (409) T ss_pred HHHHHHHHHHHHhhCCcccccCcceEEeechhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCC--CcCeEeecc Confidence 99999999999999987653 68899999999999999999999999999999999999999999996 899999999 Q ss_pred cccccccccccCCCCCCCCCCCCcccCCCCCccCCcccc Q lcl|Aclame:pro 398 ALQPLGATPDGAVEGEEAPAPKRPASTPVASLDQSPPAS 436 (518) Q Consensus 398 n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 436 (518) |++|++......... .+.++..++. T Consensus 385 n~~~~~~~~~~~~~~--------------kGG~~n~~e~ 409 (409) T protein:vir:94 385 DLYPIDTPLELRKSL--------------KGGDKNVNES 409 (409) T ss_pred cccccccchhhcccc--------------cCCCCCcCCC Confidence 999987653322100 0000000000 No 41 >protein:vir:96980 Length: 409 # NCBI annotation: ORF008 # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:1643 # MgeName: 42e # Cross-refs: genbank:acc:YP_239857;genbank:gi:66395516;genbank:GeneID:5133013 Probab=100.00 E-value=2e-90 Score=512.30 Aligned_cols=402 Identities=17% Similarity=0.228 Sum_probs=331.0 Q ss_pred CCCCCCCCCccccccccchhhhhhhccCc-cCCcccCccchhhHHHHhhhHHHHHHHHHHHHhhccCceEEEEecCCcee Q lcl|Aclame:pro 1 MLLANGQTLSAPAMAELSPQMQDSYYYAP-AVGMQLERQFSLYGGIYKNQPWVRTVIAKRAQALARLPVKCMFTSGDTET 79 (518) Q Consensus 1 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~v~~~v~~ia~~ia~lp~~v~~~~~~~~~ 79 (518) -+|+|.++. ..+.|+....+... ..++.......+..+.++++++|++||++||++||+||++++++++ T Consensus 5 ~~~~~~k~~------~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~a~~~~~V~~ci~~ia~~ia~lp~~~~~~~~---- 74 (409) T protein:vir:96 5 NIVTRIKKK------LIDNWIDQSASKLYDFSPWKNKSFWGVINNTLETNETIFSAITKLSNSMASLPLKMYEDYK---- 74 (409) T ss_pred cchhhhhhH------HhhhhhccccccccccccccCccccccchhhHhhhHHHHHHHHHHHHhhhhCceEEeeccc---- Confidence 455554432 11122211111100 0000001112345567899999999999999999999999998653 Q ss_pred eecchHHHHHhhccCccCCHHHHHHHHHHHHHHcCCeeEEeeeCCCCceeeeeeeCCcceEEEeccCcceEEEEeeccCC Q lcl|Aclame:pro 80 EEHDTGYAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQKNKSGTPEKLMPMHPSRVAIKRNSRTGRYEYYFQAGAG 159 (518) Q Consensus 80 ~~~~~~~~~l~~~PN~~~t~~~f~~~~~~~~ll~G~~~~~i~~~~~G~~~~l~~l~p~~v~~~~~~~~~~~~~~~~~~~~ 159 (518) ..+|+.+++|+.+||++||+++||+.++.+++++||+|++++++..|++++|||++|++|++..+.+++.++|.+... T Consensus 75 ~~~~~l~~lL~~~PN~~~t~~~f~~~~~~~lll~Gnay~~i~r~~~G~~~~L~~l~~~~v~v~~~~~~~~~~y~~~~~-- 152 (409) T protein:vir:96 75 VVNTEVSDLLTVSPNNSLSSFDFINQIETIRNEKGNAYVLIERDIYHQPSKLFLLNPDVVEMLIENQSRELYYSIHAA-- 152 (409) T ss_pred ccchhHHHHHhhhcccCCCHHHHHHHHHHHHhhcCceEEEEEECCCCcEEEEEEEcCceeEEEEeCCCcEEEEEEEcC-- Confidence 345677778888999999999999999999999999999999999999999999999999999988888888777543 Q ss_pred CCceeEEEeeeeeEEeecCCCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHccCCcceeeeeCCcCCHHHHHHHHHHH Q lcl|Aclame:pro 160 VGTQLVSFADDEVVPIRFFNPDGLERGLSLMESLKSTIFSEDSSRNATAAMWKNAGRPNLVLRHEKRLSPEAQQRLREQF 239 (518) Q Consensus 160 ~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~p~gil~~~~~~~~e~~~~~~~~~ 239 (518) .+..+.|++++||||+++++.+.++|+||+..+...+..+.+++++. ++.++..++++++.+..+++++++++++.| T Consensus 153 -~g~~~~~~~~evih~r~~~~~~~~~G~s~l~~~~~~i~~~~~~~~~~--~~~~~~~~~~i~~~~~~l~~e~~~~~~~~~ 229 (409) T protein:vir:96 153 -TGNKLIVHNMDMLHFKHIVASNMVQGISPIDVLKNTTDFDNAVRTFN--LTEMQKPDSFMLKYGSNVSTEKRQQVLEDF 229 (409) T ss_pred -CceEEEEccccEEEeCCCCCCCccccccHHHHHHHHHHHHHHHHHHH--HHhcCCCceeEEecCCCCCHHHHHHHHHHH Confidence 34567899999999998877778899999999999999999998774 555555667788889999999999999999 Q ss_pred HHHhcCccccccceeccCCcccccccCChhhHHHHHHHHHHHHHHHHHhccchHhhccccccccccHHHHHHHHHHHHHH Q lcl|Aclame:pro 240 DRAHAGSSNTGKTMVVEEGMEPIPLQLTAVEMQFIEARQLNREEVCGVYDIAPPIVHILDRATFSNISAQMRAFYRDTMA 319 (518) Q Consensus 240 ~~~~~g~~n~g~~~vl~~g~~~~~~~~~~~d~q~~e~~~~~~~~Ia~~fgVpp~~lg~~~~~~~s~~e~~~~~~~~~~l~ 319 (518) .+.+. |+|+++++++|++|+++++++.|+||+|.+++++++||++|||||++||..++++++|.|++.+.|+++||. T Consensus 230 ~~~~~---n~g~~~vl~~g~~~~~l~~~~~d~q~~e~~~~~~~~Ia~~fgVPp~~lg~~~~~~~s~~e~~~~~f~~~~l~ 306 (409) T protein:vir:96 230 KQYYE---ENGGILFQEPGVEIEPLPKKYVSEDIVASENLTRERVANVFQLPSIFLNARSNTNFAKNEELNRFYLQHTLL 306 (409) T ss_pred HHHhh---cCCCeeecCCCceEEEcCCChhHHHHHHHHHHHHHHHHHHhCCCHHHhCCCCCCCcccHHHHHHHHHHHHHH Confidence 99874 578999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred HHHHHHHHHHHhhhcchhh--ccceeeechhhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHHhCCCCCCccCceeeecc Q lcl|Aclame:pro 320 IPIARIQSAMDKYVGQYWV--RKNRMKFDIDDVIQPDWEAKSESTQKMVNSGVATPNEGREIMGLPRSDDPKADELYANS 397 (518) Q Consensus 320 P~~~~ie~~ln~~l~~~~~--~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~T~NE~R~~~g~~pi~~~~gD~~~~~~ 397 (518) |++++||++||++|++..+ .+++++||++.+++.|.+++++.+++++++|++|+||+|+++|+||++ |||++++++ T Consensus 307 P~~~~ie~~l~~~Ll~~~~~~~g~~i~fd~~~ll~~d~~~~~e~~~~~~~~G~~T~NE~R~~~g~~pi~--ggD~~~~~~ 384 (409) T protein:vir:96 307 PIVKQYEEEFNRKLLTKTDREKNRYFKFNVKSYLRADSATQAEVYFKAVRSGYYTINDIREWEDLPPVE--GGDKPLISG 384 (409) T ss_pred HHHHHHHHHHHhhcCCcccccCcceEEeechhhhccCHHHHHHHHHHHHhCCCCCHHHHHHHhCCCCCC--Ccceeeecc Confidence 9999999999999998755 468899999999999999999999999999999999999999999995 899999999 Q ss_pred cccccccccccCCCCCCCCCCCCcccCCCCCccCCcccc Q lcl|Aclame:pro 398 ALQPLGATPDGAVEGEEAPAPKRPASTPVASLDQSPPAS 436 (518) Q Consensus 398 n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 436 (518) |++|++......... ..++ +..++. T Consensus 385 n~~~~~~~~~~~~~~----~gG~----------~n~~e~ 409 (409) T protein:vir:96 385 DLYPIDTPLELRKSL----KGGD----------KNVNES 409 (409) T ss_pred cccccccchhhcccc----cCCC----------CCcCCC Confidence 999987643322110 0000 000000 No 42 >protein:vir:3868 Length: 417 # NCBI annotation: putative portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:82 # MgeName: A2 # Cross-refs: genbank:acc:NP_680485;swissprot:trembl:q8ltc2;genbank:gi:22296525;interpro:IPR006427;interpro:IPR006944;uniprot:Q8LTC2;genbank:GeneID:951699 Probab=100.00 E-value=2.9e-90 Score=511.43 Aligned_cols=412 Identities=17% Similarity=0.195 Sum_probs=328.5 Q ss_pred CCCCCCCCCccccccccchhhhhhh--ccCc-cCCcccCccchhhHHHHhhhHHHHHHHHHHHHhhccCceEEEEecCCc Q lcl|Aclame:pro 1 MLLANGQTLSAPAMAELSPQMQDSY--YYAP-AVGMQLERQFSLYGGIYKNQPWVRTVIAKRAQALARLPVKCMFTSGDT 77 (518) Q Consensus 1 ~~f~~~~~~~~~~~~~~~~~~~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~~~v~~~v~~ia~~ia~lp~~v~~~~~~~ 77 (518) |-|.|+....... .|..... +..+ ..|.. ....++++++|++||++||++||++|+++++.+.++ T Consensus 1 m~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~g~~-------~~~~Al~~~~V~~cv~~ia~~iA~lp~~~~~~~~~~ 68 (417) T protein:vir:38 1 MKLFRGLATEVDP-----HWADHLLDSGVIPSFRGGY-------LGISALRNSDVLTAVSIVSGDVSRFPLVITDSSTDE 68 (417) T ss_pred CccccccccCCCc-----cchhhhcccccccccCCce-------echhhcccHHHHHHHHHHHHhhccCeeEEEEcCCcc Confidence 8888776555432 1221111 1111 11111 123478999999999999999999999999887654 Q ss_pred eeeecchHHHHHhhccCccCCHHHHHHHHHHHHHHcCCeeEEeeeCCC-CceeeeeeeCCcceEEEeccCcceEEEEeec Q lcl|Aclame:pro 78 ETEEHDTGYAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQKNKS-GTPEKLMPMHPSRVAIKRNSRTGRYEYYFQA 156 (518) Q Consensus 78 ~~~~~~~~~~~l~~~PN~~~t~~~f~~~~~~~~ll~G~~~~~i~~~~~-G~~~~l~~l~p~~v~~~~~~~~~~~~~~~~~ 156 (518) . ...++..++|+.+||++||+++||+.++.+++++||+|++|+|+.. |.+..|+|++|++|.+.....+ .+.|.|.. T Consensus 69 ~-~~~~~~~~lL~~~PN~~~t~~~f~~~~~~~lll~Gn~y~~i~r~~~g~~~~~l~~l~p~~v~v~~~~~~-~~~y~~~~ 146 (417) T protein:vir:38 69 V-IDLANIEYLMNTKVNKRLSAYQWKFPMMVNAILTGNAYSRIVRDPITNEPAMFEFYAPSQTQVDTSDPD-NIIYRFTP 146 (417) T ss_pred e-eccchHHHHHhcccCcCCCHHHHHHHHHHHHhhcCCeEEEEEEcCCCCEEEEEEEeCCceEEEEEcCCC-eEEEEEEE Confidence 3 3456667778889999999999999999999999999999999864 6799999999999999876544 45566544 Q ss_pred cCCCCceeEEEeeeeeEEeecCCCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHccCCcceeeeeCCcCCHHHHHHHH Q lcl|Aclame:pro 157 GAGVGTQLVSFADDEVVPIRFFNPDGLERGLSLMESLKSTIFSEDSSRNATAAMWKNAGRPNLVLRHEKRLSPEAQQRLR 236 (518) Q Consensus 157 ~~~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~p~gil~~~~~~~~e~~~~~~ 236 (518) . .++....+++++|||||+++.++ ++|+||+.++..+|..+.+++++..++|+||++|++|++.++.+++++.++++ T Consensus 147 ~--~~~~~~~~~~~dviH~r~~~~d~-~~G~s~l~~~~~~i~~~~~~~~~~~~~f~ng~~p~~il~~~~~l~~e~~~~~~ 223 (417) T protein:vir:38 147 Y--NSSMQKVCGFEDVIHWKFFSYDT-IMGRSPLLSLGDEIGLQESGVSTLQKFFKSGLKGSIIKAKESRLSAEARQKIR 223 (417) T ss_pred c--CCcEEEEecCcceEEecCCCCCC-ccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCCcEEEEeCCCCCHHHHHHHH Confidence 3 34556778999999999987665 78999999999999999999999999999999999999999999999999999 Q ss_pred HHHHHHhcCccccccceeccCCcccccccCChhhHHHHHHHHHHHHHHHHHhccchHhhccccccccccHHHHHHHHHHH Q lcl|Aclame:pro 237 EQFDRAHAGSSNTGKTMVVEEGMEPIPLQLTAVEMQFIEARQLNREEVCGVYDIAPPIVHILDRATFSNISAQMRAFYRD 316 (518) Q Consensus 237 ~~~~~~~~g~~n~g~~~vl~~g~~~~~~~~~~~d~q~~e~~~~~~~~Ia~~fgVpp~~lg~~~~~~~s~~e~~~~~~~~~ 316 (518) +.|++.++|. |+|+++|+++|++|+++++++.|+||+|.+++++++||++|||||++||. .++++|++++.+.|+++ T Consensus 224 ~~~~~~~~g~-n~g~~~vl~~g~~~~~l~~~~~d~q~le~~~~~~~~Ia~~fgVPp~~lg~--~~~~s~~e~~~~~~~~~ 300 (417) T protein:vir:38 224 EDFERAQAGA-DAGSPIIVDATMDYQPLEVDTNVLNLINSNNYSTAQIAKALRVPAYRLAQ--NSPNQSVKQLADDYIRN 300 (417) T ss_pred HHHHHHhccc-ccCCceeccCCceEEEccCCHHHHHHHHHHHhhHHHHHHHhCCCHHHhCC--CCcchhHHHHHHHHHHH Confidence 9999999874 89999999999999999999999999999999999999999999999984 56889999999999999 Q ss_pred HHHHHHHHHHHHHHhhhcchhh-ccceeeechhhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHHhCCCCCCccCceeee Q lcl|Aclame:pro 317 TMAIPIARIQSAMDKYVGQYWV-RKNRMKFDIDDVIQPDWEAKSESTQKMVNSGVATPNEGREIMGLPRSDDPKADELYA 395 (518) Q Consensus 317 ~l~P~~~~ie~~ln~~l~~~~~-~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~T~NE~R~~~g~~pi~~~~gD~~~~ 395 (518) ||.||++.||++||++|++... ..++++||.+.+.+.+. +.+++++++|++|+||+|+++|+||++++++|++++ T Consensus 301 tl~P~~~~ie~~l~~~Ll~~~~~~~~~~~fd~~~l~~~~~----~~~~~~~~~G~~T~NE~R~~~gl~pi~~g~~d~~~~ 376 (417) T protein:vir:38 301 DLPFYFEPITSEFELKLLDDAQRHQYCIGFDTKSVNGLPI----ADVNTAVNGGLWTGNEGRAELGKKPLKDPNMDRIQS 376 (417) T ss_pred HHHHHHHHHHHHHHhhhcChhhcccceEEechhhhhHHHH----HHHHHHHhCCCcCHHHHHHHhCCCCCCCCCCCeeee Confidence 9999999999999999997654 35789999887755443 346788999999999999999999999888899999 Q ss_pred cccccccccccccCCCCCCCCCCCCcccCCCCCccCCccccccccCh Q lcl|Aclame:pro 396 NSALQPLGATPDGAVEGEEAPAPKRPASTPVASLDQSPPASVPGLSP 442 (518) Q Consensus 396 ~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 442 (518) |+|+++++...........+...+++..+...+. .+. +..+ T Consensus 377 ~~n~~~~d~~~~~~~~~~~~~kgg~~~~~~~~~~-----~~~-~~~~ 417 (417) T protein:vir:38 377 TLNTVFLDQKEAYQAEHAAELKGGDTNAKGNQNG-----SGT-NANS 417 (417) T ss_pred cccccccccccccccccccccCCCCCCCCCCCcC-----CCC-cCCC Confidence 9999999976543322211111111111100000 000 0000 No 43 >protein:vir:94666 Length: 723 # NCBI annotation: portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:1527 # MgeName: mu1/6 # Cross-refs: genbank:acc:YP_579205;genbank:gi:93007441;genbank:GeneID:5076785 Probab=100.00 E-value=2.5e-89 Score=506.29 Aligned_cols=488 Identities=16% Similarity=0.163 Sum_probs=330.0 Q ss_pred ccccchhhhhhhccCccCCcccCccchhhHHHHhhhHHHHHHHHHHHHhhccCceEEEEecCCceeeecchHHHHHhhcc Q lcl|Aclame:pro 14 MAELSPQMQDSYYYAPAVGMQLERQFSLYGGIYKNQPWVRTVIAKRAQALARLPVKCMFTSGDTETEEHDTGYAKLLADP 93 (518) Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~v~~ia~~ia~lp~~v~~~~~~~~~~~~~~~~~~l~~~P 93 (518) +.. +.+.+++ + ..++.+.......+.|+++++|++||++||++||++||++++.+ +.....|+.+.+|+.+| T Consensus 1 ~~~----~~~~~g~-~-~~~~~~~~~~~~~~~~~~~~~V~acV~~Ia~~iA~lpl~l~~~~--~~~~~~~~l~~lL~~~P 72 (723) T protein:vir:94 1 MTT----FPSGAGG-W-NAWSADSVFGNGAKGWSNSAVAYRCISMLANNAASVDLVVRGPD--GELDELHPLSQLWNVMP 72 (723) T ss_pred Ccc----cccCCCc-c-ccccccccccccHHHHhhhHHHHHHHHHHHHhhccceeEEEcCC--CccchhhHHHHHHhhCC Confidence 111 1111111 1 11112223344567899999999999999999999999998654 33445566777777899 Q ss_pred CccCCHHHHHHHHHHHHHHcCCeeEEeeeCC---CCceeeeeeeCCcceEEEeccCcc------eEEEEeeccCCCCcee Q lcl|Aclame:pro 94 CEYLDPFAFWEWVASTLDIYGETYLAIQKNK---SGTPEKLMPMHPSRVAIKRNSRTG------RYEYYFQAGAGVGTQL 164 (518) Q Consensus 94 N~~~t~~~f~~~~~~~~ll~G~~~~~i~~~~---~G~~~~l~~l~p~~v~~~~~~~~~------~~~~~~~~~~~~~~~~ 164 (518) |++||+++||+.++.+|+++||+|++++++. .|.+.+|+|++|..+.+.....+. ...|.+. ..++.. T Consensus 73 N~~~t~~~f~~~~~~~lll~Gnay~~i~r~~r~~~g~p~~l~~l~~~~~~v~~~~~~~~~~~~~~~~y~~~---~~~G~~ 149 (723) T protein:vir:94 73 NRAMPAQVLKALSMTRLQLDGQCHLWLNYNGRTPAGVPDEIWYVYDRVTTIVATRAADAVPQAQIIGYVIE---RTDGVR 149 (723) T ss_pred CCCCCHHHHHHHHHHHHhhcCCeEEEEEecCCccccceeEEEEecCcceEEeecCCCccceeeeeeEEEEE---ecCcee Confidence 9999999999999999999999999998653 488999999999888776654432 2233332 234567 Q ss_pred EEEeeeeeEEeecCCCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHccCCcceeeeeCCcCCHHHHHHHHHHHHHHhc Q lcl|Aclame:pro 165 VSFADDEVVPIRFFNPDGLERGLSLMESLKSTIFSEDSSRNATAAMWKNAGRPNLVLRHEKRLSPEAQQRLREQFDRAHA 244 (518) Q Consensus 165 ~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~p~gil~~~~~~~~e~~~~~~~~~~~~~~ 244 (518) +.|++++|||||++++.+.++|+||+..+..+|....++++++.++|+||++|+|||+.+ .+++++++++++.|++.++ T Consensus 150 ~~~~~~dIiHir~~~~~dg~~G~Spi~~a~~~i~~~~aa~~~~~~~f~NG~~p~giL~~~-~l~~e~~~~~~~~~~~~~~ 228 (723) T protein:vir:94 150 VPVLADEMLWLRFSDPYDPLAVMAPWKAARAAVDADFYAATWQRQSFKNGARPGGVVNLG-DMDEQTFTKTVAAFRSQVE 228 (723) T ss_pred EEecccceEEecCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhcCCCcceEEEcC-CCCHHHHHHHHHHHHHHhh Confidence 889999999999998777789999999999999999999999999999999999999987 5899999999999999999 Q ss_pred Cccccccceecc----------CCcccccccCChhhHHHHHHHHHHHHHHHHHhccchHhhccccccccccHHHHHHHHH Q lcl|Aclame:pro 245 GSSNTGKTMVVE----------EGMEPIPLQLTAVEMQFIEARQLNREEVCGVYDIAPPIVHILDRATFSNISAQMRAFY 314 (518) Q Consensus 245 g~~n~g~~~vl~----------~g~~~~~~~~~~~d~q~~e~~~~~~~~Ia~~fgVpp~~lg~~~~~~~s~~e~~~~~~~ 314 (518) |..|+|+++||+ .|++|++++++++|+||+|++++++++||++|||||++|+. .++++|.+++.+.|+ T Consensus 229 G~~Nagk~~vL~g~~~~~~vl~~G~~~~~l~~s~~D~q~le~r~~~~~eIa~afgVPp~~i~~--~st~sN~e~~~~~f~ 306 (723) T protein:vir:94 229 GVQNAGRHLLIAGQGSDGGAAGKGATFTSLSMSPAEMDYINSRMHSAEEVMLAFGIRKDALLG--GSTYENQAEAKAAVW 306 (723) T ss_pred chhhcCcceeecccccccccccCCceEEEccCCHHHHHHHHHHHHhHHHHHHHhCCChhHcCC--CCCcccHHHHHHHHH Confidence 999999999986 58999999999999999999999999999999999999974 568899999999999 Q ss_pred HHHHHHHHHHHHHHHHhhhcchhhccceeeechhhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHHhCCCCCCccCceee Q lcl|Aclame:pro 315 RDTMAIPIARIQSAMDKYVGQYWVRKNRMKFDIDDVIQPDWEAKSESTQKMVNSGVATPNEGREIMGLPRSDDPKADELY 394 (518) Q Consensus 315 ~~~l~P~~~~ie~~ln~~l~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~T~NE~R~~~g~~pi~~~~gD~~~ 394 (518) ++||+||+.+||++||++|++..+..++++||...++++|.+++++.+++++++|++|+||+|+++||||+++..|+..+ T Consensus 307 ~~tL~P~~~~ie~~ln~~Ll~~~g~~~~~~f~~~~lLr~D~~~r~~~~~~~v~~G~~T~NE~R~~lglpPi~gGd~~~~~ 386 (723) T protein:vir:94 307 TETLIPQMEVMASITDLQLLPDIGWTVEWDFNSVPALQEDLEAQAGRNQGYLVNDVLMVDEVRATIGLDPLPGGIGQMTL 386 (723) T ss_pred HHHHHHHHHHHHHHHhHhhcccccCceEEeecchhhhhcCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCccccee Confidence 99999999999999999999887777788899889999999999999999999999999999999999999854444555 Q ss_pred ecc--cccccccccccCCCCC------------CCCCCCCcccCCCCCccCCccccccccChhhhcchh--------HHH Q lcl|Aclame:pro 395 ANS--ALQPLGATPDGAVEGE------------EAPAPKRPASTPVASLDQSPPASVPGLSPTNSDRST--------DSG 452 (518) Q Consensus 395 ~~~--n~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~ 452 (518) .|. ++.|.+.......++. ..|.+..++. .....+.++..+..+.....-+... .+. T Consensus 387 ~p~~~~~a~~~~~~p~~~e~~~~~~~~~~~~~~~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 465 (723) T protein:vir:94 387 TPYRAQFAPAPAPAPAVEEGAARMLALLERVAADRPLPELPVR-ATTVLHHDPGPDPQQTLYERLEALLQPLLVELGRRQ 465 (723) T ss_pred ccccccccCCCCCCccchhhhHhhhhhccccccccCcCCCCCC-CCCCCCCCcccCCchhHHHHHHHHHhhhHHHHHHHH Confidence 654 3333222111000000 0000000000 0000001110000000000000000 000 Q ss_pred HHHHHHHh-hccCcchhHH---HHHHHHHH-HhhhhhhhcccccchhhhhhhHHHHHHHHHH-----HHhhhcccC Q lcl|Aclame:pro 453 KTEPRRLM-QKPPPKESSP---KHLRAVKG-AMGRGKDIKGFALQLAEKYPDDLEDILLAVQ-----LALAERKDN 518 (518) Q Consensus 453 ~~~~~~~~-~k~~~~~~~~---~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~ 518 (518) +...++.+ .-..+..++. ..++.+.. ...++..+ + ....-+...+-++.+..+.. -.+....|. T Consensus 466 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 539 (723) T protein:vir:94 466 AAVTLREFDLLMRGERAAALWLADVRAVASEAYERGALL-A-PPDAEEVPPARLTRLDLAPEELAVRINVKRIFNA 539 (723) T ss_pred HHHHHHhhchhhcchHHHHHHHHHHHHHHHhccccceec-c-ccccchhhHHHHHHHHHhhHHHHHHHHHHHHHHH Confidence 00001100 0011222221 12222211 11111100 0 00000111222222222211 111111111 No 44 >protein:vir:9702 Length: 406 # NCBI annotation: hypothetical protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:174 # MgeName: 315.2 # Cross-refs: genbank:acc:NP_795464;genbank:gi:28876227;genbank:GeneID:1257772 Probab=100.00 E-value=1.5e-88 Score=502.13 Aligned_cols=404 Identities=17% Similarity=0.187 Sum_probs=330.1 Q ss_pred CCCCCCCCCccccccccchhhhhhhccCccCCcccCccchhhHHHHhhhHHHHHHHHHHHHhhccCceEEEEecCCceee Q lcl|Aclame:pro 1 MLLANGQTLSAPAMAELSPQMQDSYYYAPAVGMQLERQFSLYGGIYKNQPWVRTVIAKRAQALARLPVKCMFTSGDTETE 80 (518) Q Consensus 1 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~v~~ia~~ia~lp~~v~~~~~~~~~~ 80 (518) |=|.++...... ..++++..++++.... ......++++++|++||++||++||++|+++++.++ .+. T Consensus 1 m~~f~~~~~~~~---~~~~~~~~~~~~~~~~--------~~~~~~Al~~~~V~~~i~~Ia~~iA~lp~~~~~~~g--~~~ 67 (406) T protein:vir:97 1 MSFFQPLGTSKV---SYDDYISSVLAGDVSQ--------KYLGVSALKNSDILTATSIIAGDIARFPLVKKDVNG--DII 67 (406) T ss_pred CccccccCCCCC---CcchHHHHHhcCCCCc--------ccccchhhccHHHHHHHHHHHHhhhhCeeEEEecCc--ccc Confidence 877776544332 2345555555432211 122235789999999999999999999998876544 345 Q ss_pred ecchHHHHHhhccCccCCHHHHHHHHHHHHHHcCCeeEEeeeCC-CCceeeeeeeCCcceEEEeccCcceEEEEeeccCC Q lcl|Aclame:pro 81 EHDTGYAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQKNK-SGTPEKLMPMHPSRVAIKRNSRTGRYEYYFQAGAG 159 (518) Q Consensus 81 ~~~~~~~~l~~~PN~~~t~~~f~~~~~~~~ll~G~~~~~i~~~~-~G~~~~l~~l~p~~v~~~~~~~~~~~~~~~~~~~~ 159 (518) .+|+..++|+.+||++||+++||+.++.+|+++||+|++++++. .|++.+|+|++|++|++..+.+ +.+.|.|.. . T Consensus 68 ~~~~~~~lL~~~PN~~~t~~~f~~~~~~~l~l~Gnay~~i~r~~~~g~~~~L~~i~p~~v~v~~~~~-~~~~y~~~~--~ 144 (406) T protein:vir:97 68 HDEDINYLLNVKSTSNASARTWKFAMAVNAILTGNSFSRILRDPKTNQALQFQFYRPSETTVEETDN-HEIVYTFTD--M 144 (406) T ss_pred ccchHHHHhhccCCCCCCHHHHHHHHHHHHhhcCCeEEEEEecCCCCeEEEEEEECCCeeEEEEcCC-ceEEEEEEe--c Confidence 56667777778999999999999999999999999999999985 6899999999999999987754 455665543 3 Q ss_pred CCceeEEEeeeeeEEeecCCCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHccCCcceeeeeCCcCCHHHHHHHHHHH Q lcl|Aclame:pro 160 VGTQLVSFADDEVVPIRFFNPDGLERGLSLMESLKSTIFSEDSSRNATAAMWKNAGRPNLVLRHEKRLSPEAQQRLREQF 239 (518) Q Consensus 160 ~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~p~gil~~~~~~~~e~~~~~~~~~ 239 (518) .++..+.+++++|||||+++.++ ++|+||+..+..+|..+.+++++..++|+||+.|++++..+..+++++.+++++.| T Consensus 145 ~~~~~~~~~~~evih~r~~~~dg-~~G~spi~~~~~~i~~~~a~~~~~~~~f~ng~~~~~i~~~~~~l~~e~~~~~~~~~ 223 (406) T protein:vir:97 145 LTAKQVKCFAHDVIHWKFFSHDT-ILGRSPLLSLGDEIDLQTGGINTLIKFFKDGFSSGILTMKGAQLSGDARQRARQEF 223 (406) T ss_pred CCceEEEEccccEEEecCCCCCC-cccccHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEecCCCCCHHHHHHHHHHH Confidence 45677889999999999887665 67999999999999999999999999999999999999999999999999999999 Q ss_pred HHHhcCccccccceeccCCcccccccCChhhHHHHHHHHHHHHHHHHHhccchHhhccccccccccHHHHHHHHHHHHHH Q lcl|Aclame:pro 240 DRAHAGSSNTGKTMVVEEGMEPIPLQLTAVEMQFIEARQLNREEVCGVYDIAPPIVHILDRATFSNISAQMRAFYRDTMA 319 (518) Q Consensus 240 ~~~~~g~~n~g~~~vl~~g~~~~~~~~~~~d~q~~e~~~~~~~~Ia~~fgVpp~~lg~~~~~~~s~~e~~~~~~~~~~l~ 319 (518) ++.++| .|+|+++|+++|++|+++++++.|+||+|.+++++++||++|||||.+||. .+++++.+++.+.|+++||. T Consensus 224 ~~~~~g-~n~g~~~vl~~g~~~~~l~~~~~d~q~le~~~~~~~~Ia~afgVPp~~lg~--~~~~~~~e~~~~~f~~~~l~ 300 (406) T protein:vir:97 224 EKMREG-SVGGSPLVFDSTMEYTPLEIDTNVLQLITSNNFSTAQIAKALRVPSYKLGV--NSPNQSVAQLMEDYVTNDLP 300 (406) T ss_pred HHHhcc-cccCceeecCCCceEEEccCCHHHHHHHHHHHhhHHHHHHHhCCCHHHcCC--CCCcchHHHHHHHHHHHHHH Confidence 999887 689999999999999999999999999999999999999999999999986 45678999999999999999 Q ss_pred HHHHHHHHHHHhhhcchhh-ccceeeechhhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHHhCCCCCCccCceeeeccc Q lcl|Aclame:pro 320 IPIARIQSAMDKYVGQYWV-RKNRMKFDIDDVIQPDWEAKSESTQKMVNSGVATPNEGREIMGLPRSDDPKADELYANSA 398 (518) Q Consensus 320 P~~~~ie~~ln~~l~~~~~-~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~T~NE~R~~~g~~pi~~~~gD~~~~~~n 398 (518) ||++.||++|+++|++..+ ..++++||++. +.+.+++.+.+++++|+||+||+|+++|++|+++|+||++++|+| T Consensus 301 P~~~~ie~~l~~kll~~~~~~~~~i~fd~~~----~~~~~~~~~~~~~~~g~~T~NE~R~~~g~~p~~~~~gD~~~~~~n 376 (406) T protein:vir:97 301 FYFDAITSELGLKTLNDKDRRLYHIEFDTRS----VTGRNVDEIVKLVNNQILTPNQGLVELGKQKSTDPNMDRYQSSLN 376 (406) T ss_pred HHHHHHHHHHhhhhcChhhccceeEEEecCc----cchhhHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCCCeEeeccC Confidence 9999999999999997654 35678998655 455667778889999999999999999999999999999999999 Q ss_pred ccccccccccCCCCCCCCCCCCcccCCCCCccCC Q lcl|Aclame:pro 399 LQPLGATPDGAVEGEEAPAPKRPASTPVASLDQS 432 (518) Q Consensus 399 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 432 (518) ++|++...+.......+.+ +.+.+++.++. T Consensus 377 ~~~~~~~~~~~~~~~~~~~----gg~~~~~~~~~ 406 (406) T protein:vir:97 377 YVFLDKKEEYQDKVGIKGK----GGEVNAEEDKS 406 (406) T ss_pred ccchhcccccccccccccC----CCCCCCCCCCC Confidence 9999876433221111000 00000000010 No 45 >protein:vir:8100 Length: 466 # NCBI annotation: gp4 # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:152 # MgeName: Che9c # Cross-refs: genbank:acc:NP_817681;genbank:gi:29566112;genbank:GeneID:1259306 Probab=100.00 E-value=4e-86 Score=488.74 Aligned_cols=419 Identities=16% Similarity=0.207 Sum_probs=330.0 Q ss_pred CCCCCCCCCcccccc-------------------ccchhhhhhhccCccCCcccCccchhhHHHHhhhHHHHHHHHHHHH Q lcl|Aclame:pro 1 MLLANGQTLSAPAMA-------------------ELSPQMQDSYYYAPAVGMQLERQFSLYGGIYKNQPWVRTVIAKRAQ 61 (518) Q Consensus 1 ~~f~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~v~~ia~ 61 (518) -|+++..+++..+.. ...|++.....+.... ........+..+.|+++++|++||++||+ T Consensus 6 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~g~~v~~~~a~~~~~v~~~i~~Ia~ 84 (466) T protein:vir:81 6 RLLSTRGAAPRMSIDDYAQMLNEFAFNGIGYGFGGGVPRIQQTLAGPSTE-LAPDTFVGLATQAYQANGPVFACMLVRQL 84 (466) T ss_pred HHhhccCcccccchhhhhhhhhhhhccccccccccccHHHHHhhcccccc-ccCccccccchhhhhccHHHHHHHHHHHH Confidence 344444433211110 1122222222221111 11112334667889999999999999999 Q ss_pred hhccCceEEEEecCCceeeecchHHHHHhhccCccCCHHHHHHHHHHHHHHcCCeeEEeeeCCC--------Cceeeeee Q lcl|Aclame:pro 62 ALARLPVKCMFTSGDTETEEHDTGYAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQKNKS--------GTPEKLMP 133 (518) Q Consensus 62 ~ia~lp~~v~~~~~~~~~~~~~~~~~~l~~~PN~~~t~~~f~~~~~~~~ll~G~~~~~i~~~~~--------G~~~~l~~ 133 (518) +||+|||+++++++++..+..+++++.|+.+||++||+++||+.++.+++++||+|++|+++.. |.+++|+| T Consensus 85 ~ia~lp~~~~~~~~~~~~~~~~~~~~~L~~~PN~~~t~~~f~~~l~~~lll~Gnay~~i~r~~~g~l~~~~~g~~~~l~~ 164 (466) T protein:vir:81 85 VFSSVRFRWQRLRDGKPSDTFGSRDLQILETPWKGGTTQDMLSRMIQDADLAGNSYWTIVDGEFVRMRPDWVDVVVEERM 164 (466) T ss_pred hhccCceEEEEecCCceeeccccHHHHHhhCCCCCCCHHHHHHHHHHHHHhcCCeEEEEEecCccccccccCcceeEEEE Confidence 9999999999998877778888999999999999999999999999999999999999999765 45899999 Q ss_pred eCCcceEEEeccCcce-EEEEeeccC-CCCceeEEEeeeeeEEeecC-CCCcccccchHHHHHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 134 MHPSRVAIKRNSRTGR-YEYYFQAGA-GVGTQLVSFADDEVVPIRFF-NPDGLERGLSLMESLKSTIFSEDSSRNATAAM 210 (518) Q Consensus 134 l~p~~v~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~vih~~~~-~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~ 210 (518) ++|.+|++..+.++.. ..|.|.... ..++..+.|++++||||+++ ++.+.++|+||+..+.++|....+++++..++ T Consensus 165 l~~~~v~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~dviHir~~~~~~d~~~G~s~i~~~~~~i~~~~a~~~~~~~~ 244 (466) T protein:vir:81 165 VRGGRGELGGGQLGWRKVGYLYTEGGRQSGNESVGFLAEDVVHFAPIPDPLASYRGMSWLTPILREIRADQAMSKHQAKF 244 (466) T ss_pred ecCcceEEEEcCCCceEEEEEEEecCcccccceeeeccccEEEEcCCCCcccccccccHHHHHHHHHHHHHHHHHHHHHH Confidence 9999999999877653 455555443 23456678999999999975 45567899999999999999999999999999 Q ss_pred HHccCCcceeeeeCCcCCHHHHHHHHHHHHHHhcCccccccceeccCCcccccccCChhhHHHHHHHHHHHHHHHHHhcc Q lcl|Aclame:pro 211 WKNAGRPNLVLRHEKRLSPEAQQRLREQFDRAHAGSSNTGKTMVVEEGMEPIPLQLTAVEMQFIEARQLNREEVCGVYDI 290 (518) Q Consensus 211 ~~ng~~p~gil~~~~~~~~e~~~~~~~~~~~~~~g~~n~g~~~vl~~g~~~~~~~~~~~d~q~~e~~~~~~~~Ia~~fgV 290 (518) |+||++|+|||+.+..+++++++++++.|++.++|.+|+|+++|+++|++|+++++++.|+||+|++++++++||++||| T Consensus 245 f~ng~~p~gil~~~~~l~~e~~~~~~~~~~~~~~g~~n~g~~~vl~~g~~~~~l~~~~~d~q~le~~~~~~~~Ia~~fgV 324 (466) T protein:vir:81 245 FDNGATVNLVIKHNPMADPAAVKKWADEVNSKHAGVDNAWKNLNLYPGADADVVGSNLQEIDFKNVRGGGETRIAAAAGV 324 (466) T ss_pred HhcCCCcceEEecCCCCCHHHHHHHHHHHHHHhcCccccccceEcCCCceEEEccCChhHHHHHHHHHHHHHHHHHHhCC Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred chHhhccc---cccccccHHHHHHHHHHHHHHHHHHHHHHHHHhhhcchhh-ccceeeechhhhhccCHHHHHHH----- Q lcl|Aclame:pro 291 APPIVHIL---DRATFSNISAQMRAFYRDTMAIPIARIQSAMDKYVGQYWV-RKNRMKFDIDDVIQPDWEAKSES----- 361 (518) Q Consensus 291 pp~~lg~~---~~~~~s~~e~~~~~~~~~~l~P~~~~ie~~ln~~l~~~~~-~~~~~~fd~~~l~~~d~~~~~~~----- 361 (518) ||++||+. ++++|+|+|++.+.|+++||.||+++||++||++|++..+ ..++++||...++++|.++++++ T Consensus 325 Pp~~lG~~~~~~~st~sn~eq~~~~f~~~tl~P~~~~ie~~l~~~L~~~~~~~~~~~~f~~~~llr~d~~~r~~~~~~~~ 404 (466) T protein:vir:81 325 PPVIVGLSEGLAAATYSNYGQARRRLADGTAHPLWQNLSGCIGHVMPDMGPDVRLWYDADDVPFLREDEKDAADIQKVRA 404 (466) T ss_pred CHHHcccccCCCccccccHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcccCcceEEEecchhhhccCHHHHHHHHHHHH Confidence 99999975 4578999999999999999999999999999999987644 35689999999999999988876 Q ss_pred --HHHHHhCCCcCHHHHHHHHhCCCCCCccCceeee-cccccccccccccCCCCCCCCCCCCcccCCCCCccCCcc Q lcl|Aclame:pro 362 --TQKMVNSGVATPNEGREIMGLPRSDDPKADELYA-NSALQPLGATPDGAVEGEEAPAPKRPASTPVASLDQSPP 434 (518) Q Consensus 362 --~~~~~~~g~~T~NE~R~~~g~~pi~~~~gD~~~~-~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 434 (518) +..++++|+ |+||+|.. ++ +||..++ +.++.+++....+.......+. +... +.+++.+ T Consensus 405 ~~~~~~~~~g~-t~nE~r~~-----~~--~gd~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~---Gg~~ngn 466 (466) T protein:vir:81 405 ETINTLITAGY-EPESVVAA-----VN--SGDLRLLKHTGLTSVQLLPPGVSASASSDT---PTSG---GADDNGN 466 (466) T ss_pred HHHHHHHHcCC-Chhhcccc-----cc--CCccccccCCCcchhhhcccccccccCCCC---cccC---CCCcCCC Confidence 667888995 99999954 32 6776544 4455555443322221111111 1111 0111111 No 46 >protein:vir:8317 Length: 409 # NCBI annotation: gp34 # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:154 # MgeName: Corndog # Cross-refs: genbank:acc:NP_817885;genbank:gi:29566318;genbank:GeneID:1259513 Probab=100.00 E-value=2e-86 Score=490.44 Aligned_cols=371 Identities=18% Similarity=0.219 Sum_probs=308.7 Q ss_pred CCCCCCCCCccccccccchhhhhh-hccCccCCcccCccchhhHHHHhhhHHHHHHHHHHHHhhccCceEEEEecCCcee Q lcl|Aclame:pro 1 MLLANGQTLSAPAMAELSPQMQDS-YYYAPAVGMQLERQFSLYGGIYKNQPWVRTVIAKRAQALARLPVKCMFTSGDTET 79 (518) Q Consensus 1 ~~f~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~v~~ia~~ia~lp~~v~~~~~~~~~ 79 (518) +-|.+..++.. +++ .+|+... +++.+ ..+.......+..+.++++++|++||++||++||+||+++++.+. T Consensus 33 ~~~~~~~~~~~-~~~--~~~~~~~~~~g~~-~~~~~~~~~~~t~~~~~~~~~v~acV~~Ia~~iA~lpl~~~~~~~---- 104 (409) T protein:vir:83 33 VEFRGPEEEPE-ARA--LPWIRPTAWSGYP-ESWATPSWGSAQDKLRTLIDVAWACIDLNASVLSSMPIYRMRNGR---- 104 (409) T ss_pred eeccCCCcchh-hhh--ccccccccccccc-ccccccCccccchhhHhhhHHHHHHHHHHHHhhccCceEEeeCCc---- Confidence 33333333221 111 1222111 11111 112223345567788999999999999999999999999997542 Q ss_pred eecchHHHHHhhccCccCCHHHHHHHHHHHHHHcCCeeEEe-eeCCCCceeeeeeeCCcceEEEeccCcceEEEEeeccC Q lcl|Aclame:pro 80 EEHDTGYAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAI-QKNKSGTPEKLMPMHPSRVAIKRNSRTGRYEYYFQAGA 158 (518) Q Consensus 80 ~~~~~~~~~l~~~PN~~~t~~~f~~~~~~~~ll~G~~~~~i-~~~~~G~~~~l~~l~p~~v~~~~~~~~~~~~~~~~~~~ 158 (518) ..+...++|+.+||++||+++||+.++.+|++ ||+|+++ .++.+|.+++|+|++|++|++..+.+ +...|++.. T Consensus 105 -~~~~~~~ll~~~PN~~~t~~~f~~~l~~~lll-Gnay~~~i~r~~~G~~~~L~pl~p~~v~v~~~~~-g~~~y~~~~-- 179 (409) T protein:vir:83 105 -IIDSVAWMSNPDPEVYTSWQEFAKQLFWDFQL-GEAFVLPMAHGSDGYPIRFRVVPPWLVNVELKKG-ARREYRIGG-- 179 (409) T ss_pred -cccchhhhcccCCCCCCCHHHHHHHHHHHHhh-CCcEEEEEEECCCCcEEEEEEECCcceEEEEcCC-ceEEEEEcc-- Confidence 23445567889999999999999999999987 9999875 57888999999999999999988765 455565532 Q ss_pred CCCceeEEEeeeeeEEeecCCCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHccCCcceeeeeCCcCCHHHHHHHHHH Q lcl|Aclame:pro 159 GVGTQLVSFADDEVVPIRFFNPDGLERGLSLMESLKSTIFSEDSSRNATAAMWKNAGRPNLVLRHEKRLSPEAQQRLREQ 238 (518) Q Consensus 159 ~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~p~gil~~~~~~~~e~~~~~~~~ 238 (518) ...+++|||||++++.+.+||+||+..++..|..+.++++|+.++|+||++|+|+|++++.+++++++++++. T Consensus 180 -------~~~~~eiiHir~~~~~~~~~G~spi~~~~~~i~~~~a~~~~~~~~f~nga~p~gil~~~~~ls~e~~~~~~~~ 252 (409) T protein:vir:83 180 -------LNVTDEILHIRYQGNTADAHGHGPLESAAPRQVVIGLLQKYVQNLAETGGVPLYWLGVERRLSETEAVDLMDR 252 (409) T ss_pred -------ccCccceEEeCCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhcCCCcceEeecCCCCCHHHHHHHHHH Confidence 1345899999999887888999999999999999999999999999999999999999999999999999999 Q ss_pred HHHHhcCccccccceeccCCccc-ccccCChhhHHHHHHHHHHHHHHHHHhccchHhhcccc---ccccccHHHHHHHHH Q lcl|Aclame:pro 239 FDRAHAGSSNTGKTMVVEEGMEP-IPLQLTAVEMQFIEARQLNREEVCGVYDIAPPIVHILD---RATFSNISAQMRAFY 314 (518) Q Consensus 239 ~~~~~~g~~n~g~~~vl~~g~~~-~~~~~~~~d~q~~e~~~~~~~~Ia~~fgVpp~~lg~~~---~~~~s~~e~~~~~~~ 314 (518) |++.+.| |+|+++++.+|+++ ++++++++|+||+|.+++++++||++|||||++||+.+ +.+|+|+|++.+.|+ T Consensus 253 ~~~~~~~--nag~~~il~~g~~~~~~~~~s~~d~q~le~r~~~~~eIa~~fgVPp~llg~~~~~~~~tysn~eq~~~~f~ 330 (409) T protein:vir:83 253 WIESRSK--YAGHPALVTGGATLNQAKSMSAQDLSLMELTQFNEARIAILLGVPPFLVGLPGATGSLTYSNIEQLFSFHD 330 (409) T ss_pred HHHhhCC--ccCccceecCCcccccccCCCHHHHHHHHHHHhhHHHHHHHhCCCHHHccCCCCccccccccHHHHHHHHH Confidence 9998865 78999999999987 57899999999999999999999999999999999643 457999999999999 Q ss_pred HHHHHHHHHHHHHHHHhhhcchhhccceeeechhhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHHhCCCCCCccCceee Q lcl|Aclame:pro 315 RDTMAIPIARIQSAMDKYVGQYWVRKNRMKFDIDDVIQPDWEAKSESTQKMVNSGVATPNEGREIMGLPRSDDPKADELY 394 (518) Q Consensus 315 ~~~l~P~~~~ie~~ln~~l~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~T~NE~R~~~g~~pi~~~~gD~~~ 394 (518) ++||.||+++||++||++|++. ..+++||++.++++|.+++++.+++++++|+||+||+|+++||||++ |||++- T Consensus 331 ~~tL~P~~~~ie~~l~~~Ll~~---~~~~~f~~~~llr~d~~~r~~~~~~~~~~G~lT~NE~R~~~glpp~~--ggd~l~ 405 (409) T protein:vir:83 331 RSSLRPKATAVMAALDRWALPS---PQHLELNRDDYTRPSLVERATAYKIMIEAGVMEPNEARAMERLHSEA--AAVRLS 405 (409) T ss_pred HHHHHHHHHHHHHHHHHhhCCC---CcEEEeehhhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCC--CCcccC Confidence 9999999999999999999974 45789999999999999999999999999999999999999999986 888872 Q ss_pred eccccc Q lcl|Aclame:pro 395 ANSALQ 400 (518) Q Consensus 395 ~~~n~~ 400 (518) .+-+ T Consensus 406 --~~gv 409 (409) T protein:vir:83 406 --GGGV 409 (409) T ss_pred --CCCC Confidence 1111 No 47 >protein:vir:960 Length: 413 # NCBI annotation: portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:19 # MgeName: bIL285 # Cross-refs: genbank:acc:NP_076614;genbank:gi:13095722;genbank:GeneID:920279 Probab=100.00 E-value=8.4e-86 Score=487.01 Aligned_cols=395 Identities=14% Similarity=0.198 Sum_probs=323.2 Q ss_pred CCCCCCCCCccccccc-cchhhhhhhccCccCCcccCccchhhHHHHhhhHHHHHHHHHHHHhhccCceEEEEecCCcee Q lcl|Aclame:pro 1 MLLANGQTLSAPAMAE-LSPQMQDSYYYAPAVGMQLERQFSLYGGIYKNQPWVRTVIAKRAQALARLPVKCMFTSGDTET 79 (518) Q Consensus 1 ~~f~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~v~~ia~~ia~lp~~v~~~~~~~~~ 79 (518) -+|+++++...+.... ..+.........+. ............++++++|++||++||++||++||+++++++++.+ T Consensus 14 ~~F~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~v~~cI~~ia~~ia~~~~~~~~~~~~~~~ 90 (413) T protein:vir:96 14 KFFNNKRSPTEESKAKDEIPKAPQVVMTLPN---FFKELISDGYTKLSDSPEVRMAVDCIADLVSNMTIQLMQNGETGDK 90 (413) T ss_pred CccccCCCcchhhhhhccccccccccccchh---hHhhhccchhHHHhhchHHHHHHHHHHHhhccCceEEEEecCCCcc Confidence 3555555433221110 00100000000000 0000001112236789999999999999999999999999888888 Q ss_pred eecchHHHHHhhccCccCCHHHHHHHHHHHHHHcCCeeEEeeeCCCC-ceeeeeeeCCcceEEEeccCcceEEEEeeccC Q lcl|Aclame:pro 80 EEHDTGYAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQKNKSG-TPEKLMPMHPSRVAIKRNSRTGRYEYYFQAGA 158 (518) Q Consensus 80 ~~~~~~~~~l~~~PN~~~t~~~f~~~~~~~~ll~G~~~~~i~~~~~G-~~~~l~~l~p~~v~~~~~~~~~~~~~~~~~~~ 158 (518) ..+++.+++|+.+||++||+++||+.++.+++++||+|++++++.+| .+.+|||++|.+|++..+. +.+.|.+...+ T Consensus 91 ~~~~~~~~ll~~~PN~~~t~~~f~~~~~~~lll~Gn~~~~i~r~~~g~~~~~L~~l~~~~v~~~~~~--~~~~y~~~~~~ 168 (413) T protein:vir:96 91 RIKNDLSRVVDIEPNKYLSRKTFIQWLVRSMLLEGNGNAVVKPQVSGDKIIGLTPISPYKVTFNVSD--DDLDYSITFDN 168 (413) T ss_pred ccccHHHHHHHhccccCCCHHHHHHHHHHHHhhcCCeEEEEEEcCCCCceEEEEEecCceeEEEEcC--CeEEEEEeecC Confidence 88888888899999999999999999999999999999999999877 5789999999999998864 34556654432 Q ss_pred CCCceeEEEeeeeeEEeec-CCCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHccCCcceeeeeCCcCCHHHHHHHHH Q lcl|Aclame:pro 159 GVGTQLVSFADDEVVPIRF-FNPDGLERGLSLMESLKSTIFSEDSSRNATAAMWKNAGRPNLVLRHEKRLSPEAQQRLRE 237 (518) Q Consensus 159 ~~~~~~~~~~~~~vih~~~-~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~p~gil~~~~~~~~e~~~~~~~ 237 (518) ..+++++||||+. +++.+.++|+||+.++...+....+++++..++|+||++|+|+|++++.+++++.+++++ T Consensus 169 ------~~~~~~evih~k~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~p~gil~~~~~l~~e~~~~~~~ 242 (413) T protein:vir:96 169 ------KEYDPSTLLHFVLNPSIERPFIGTGYKVALKDIVGNLKQASVTKKGFMASEYMPNLIVSVDSDSDELSDEEGRE 242 (413) T ss_pred ------cEEchhhEEEEeccCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHHhccCCccEEEEeCCCCCHHHHHHHHH Confidence 3578999999996 566677899999999999999999999999999999999999999999999999999999 Q ss_pred HHHHHhcCccccccceeccCCcc-cccc-cCChhhHHHHHHHHHHHHHHHHHhccchHhhccccccccccHHHHHHHHHH Q lcl|Aclame:pro 238 QFDRAHAGSSNTGKTMVVEEGME-PIPL-QLTAVEMQFIEARQLNREEVCGVYDIAPPIVHILDRATFSNISAQMRAFYR 315 (518) Q Consensus 238 ~~~~~~~g~~n~g~~~vl~~g~~-~~~~-~~~~~d~q~~e~~~~~~~~Ia~~fgVpp~~lg~~~~~~~s~~e~~~~~~~~ 315 (518) +|++.++|..|+|+++++++|.. +..+ .+++.|+||+|.+++++++||++|||||.+||.. ++.+++...|++ T Consensus 243 ~~~~~~~g~~n~g~~~vl~~~~~~~~~~~~~~~~d~q~~e~~~~~~~~Ia~~fgVP~~~lg~~-----~~~~~~~~~~~~ 317 (413) T protein:vir:96 243 NFEEMYLKRKEAGKPWIIPEGMVNVQQIKPLTLNDLAINDAVTLDKKTVAGIFGVPAFLLGVG-----TYNKDEFNNFIN 317 (413) T ss_pred HHHHHhcCccccCceeeecCCcccccccccCChhHHHHHHHHHHHHHHHHHHhCCCHHHcCCC-----cchHHHHHHHHH Confidence 99999999999999999977654 4555 4689999999999999999999999999999853 245888899999 Q ss_pred HHHHHHHHHHHHHHHhhhcchhhccceeeechhhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHHhCCCCCCccCceeee Q lcl|Aclame:pro 316 DTMAIPIARIQSAMDKYVGQYWVRKNRMKFDIDDVIQPDWEAKSESTQKMVNSGVATPNEGREIMGLPRSDDPKADELYA 395 (518) Q Consensus 316 ~~l~P~~~~ie~~ln~~l~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~T~NE~R~~~g~~pi~~~~gD~~~~ 395 (518) +||+||++.||++||++|++ ++++++||++.+++.|.+++++.+++++++|++|+||+|+++|+||++ |||++++ T Consensus 318 ~~l~P~~~~ie~~ln~~ll~---~~~~~~fd~~~ll~~d~~~~~~~~~~~~~~G~~t~NE~R~~~g~~p~~--~gd~~~~ 392 (413) T protein:vir:96 318 TKIMSIAQVIQQTYNKLIVE---EDMYFSLNPRSLYNYSLTEMVSAGAQMTQLNALRRNEFRNWVGMPPDA--EMDDLLV 392 (413) T ss_pred HHHHHHHHHHHHHHHHhhCC---CCcEEEEechhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCC--Ccceeee Confidence 99999999999999999986 367899999999999999999999999999999999999999999996 8999999 Q ss_pred cccccccccccccCCCCCCCCCCCCc Q lcl|Aclame:pro 396 NSALQPLGATPDGAVEGEEAPAPKRP 421 (518) Q Consensus 396 ~~n~~~~~~~~~~~~~~~~~~~~~~~ 421 (518) ++|++|++...+.... ..+++ T Consensus 393 ~~n~~~~~~~~~~~~~-----~~~dt 413 (413) T protein:vir:96 393 LENYLQQKDLVNQKKL-----IQDET 413 (413) T ss_pred cccccchhhcccccCC-----CCCCC Confidence 9999998876543221 11111 No 48 >protein:vir:3843 Length: 397 # NCBI annotation: hypothetical protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:322 # MgeName: phi adh # Cross-refs: genbank:acc:NP_050149;swissprot:trembl:q9t1f8;genbank:gi:9633041;uniprot:Q9T1F8;genbank:GeneID:1262206 Probab=100.00 E-value=1.6e-84 Score=479.96 Aligned_cols=397 Identities=14% Similarity=0.141 Sum_probs=321.6 Q ss_pred CCCCCCCCCccccccccchhhhhhhccCccCCcccCccchhhHHHHhhhHHHHHHHHHHHHhhccCceEEEEecCCceee Q lcl|Aclame:pro 1 MLLANGQTLSAPAMAELSPQMQDSYYYAPAVGMQLERQFSLYGGIYKNQPWVRTVIAKRAQALARLPVKCMFTSGDTETE 80 (518) Q Consensus 1 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~v~~ia~~ia~lp~~v~~~~~~~~~~ 80 (518) |=|.++..+...+....++.+...+.. ...+.. ++.+.++++++|++||++||++||++|+++ T Consensus 1 M~~f~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~------v~~~~al~~~~V~~~v~~ia~~ia~~p~~~---------- 63 (397) T protein:vir:38 1 MPLLKLNKSHSQGFSLNDPDWVNFLTG-GEAQKY------VSADTALKNSDIFSLIMQLSGDLAMVRYTS---------- 63 (397) T ss_pred CcchhhhhcccCcccCCchhhhhhhcC-CcCCce------echHHhhccHHHHHHHHHHHHHHhhCcccc---------- Confidence 777765433333333333332222222 222332 345678899999999999999999999964 Q ss_pred ecchHHHHHhhccCccCCHHHHHHHHHHHHHHcCCeeEEeeeCCCCceeeeeeeCCcceEEEeccCcceEEEEeeccCCC Q lcl|Aclame:pro 81 EHDTGYAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQKNKSGTPEKLMPMHPSRVAIKRNSRTGRYEYYFQAGAGV 160 (518) Q Consensus 81 ~~~~~~~~l~~~PN~~~t~~~f~~~~~~~~ll~G~~~~~i~~~~~G~~~~l~~l~p~~v~~~~~~~~~~~~~~~~~~~~~ 160 (518) .++.+++|+.+||++||+++||+.++.+++++||||++++++.+|++++|+|++|.+|++..+.+++...|.+...... T Consensus 64 -~~~~~~~l~~~PN~~~s~~~f~~~~~~~lll~Gna~~~i~r~~~g~~~~l~~l~~~~v~i~~~~~~~~~~y~~~~~~~~ 142 (397) T protein:vir:38 64 -ESDRSQSIISNPSVTANGYSFWQGMFAQLLLDGNCYAYRHKNTNGVDLSWEYLRPSQVQPMLLQDGSGLIYNINFDEPA 142 (397) T ss_pred -cccHHHHHHhcCCCCCCHHHHHHHHHHHhhhcCCEEEEEEECCCCcEEEEEEEcCceeEEEEcCCCceEEEEEEecccc Confidence 4677899999999999999999999999999999999999999999999999999999999998888999998887777 Q ss_pred CceeEEEeeeeeEEeecCCCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHccCCcceeeeeCCcCCHHHHHHHHHHHH Q lcl|Aclame:pro 161 GTQLVSFADDEVVPIRFFNPDGLERGLSLMESLKSTIFSEDSSRNATAAMWKNAGRPNLVLRHEKRLSPEAQQRLREQFD 240 (518) Q Consensus 161 ~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~p~gil~~~~~~~~e~~~~~~~~~~ 240 (518) ++..+.|++++|||++++++++..||+||+..+...|....++++++.++|+||++|+++++.+..+++++.+++++.|+ T Consensus 143 ~~~~~~~~~~eiih~~~~~~~~~~~G~s~i~~~~~~i~~~~~~~~~~~~~f~ng~~~~~il~~~~~~~~e~~~~~~~~~~ 222 (397) T protein:vir:38 143 IGYMENVPAADVIHIRLLSKNGGKTGISPLSALINEQQIKDASNELTLKALKQSVTASAVLTIQKGGLLDAETRIARSKE 222 (397) T ss_pred ccceeEecCccEEEecCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHHhccCCccEEEEeCCCCCHHHHHHHHHHHH Confidence 78888999999999999999998899999999999999999999999999999999999999999999999999999999 Q ss_pred HHhcCccccccceeccCCcccccccCChhhHHHHHHHHHHHHHHHHHhccchHhhccccccccccHHHHHHHHHHHHHHH Q lcl|Aclame:pro 241 RAHAGSSNTGKTMVVEEGMEPIPLQLTAVEMQFIEARQLNREEVCGVYDIAPPIVHILDRATFSNISAQMRAFYRDTMAI 320 (518) Q Consensus 241 ~~~~g~~n~g~~~vl~~g~~~~~~~~~~~d~q~~e~~~~~~~~Ia~~fgVpp~~lg~~~~~~~s~~e~~~~~~~~~~l~P 320 (518) ..+++ .|+|+++|+++|++|++++.++.|+||+|++++++++||++|||||.+||+.+.+ ++|.++ ...|+.+||+| T Consensus 223 ~~~~~-~n~~~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~afgVp~~~lg~~~~~-~~~~e~-~~~~~~~~l~P 299 (397) T protein:vir:38 223 ISKQI-HNSDGPVVIDALEDYKPLEVKGNIASLLNQVDWTRDQIAKVYGVPDSYLNGQGDQ-QSSITQ-ISGQYAKSLNR 299 (397) T ss_pred HHhcc-cccCCceecCCCceEEecCCChhHHHHHHHHHHHHHHHHHHhCCCHHHhCCCCCc-ccHHHH-HHHHHHHHHHH Confidence 87665 7899999999999999999999999999999999999999999999999987654 466664 46788899999 Q ss_pred HHHHHHHHHHhhhcchhhccceeeechhhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHHhCCCCCCccCceeeeccccc Q lcl|Aclame:pro 321 PIARIQSAMDKYVGQYWVRKNRMKFDIDDVIQPDWEAKSESTQKMVNSGVATPNEGREIMGLPRSDDPKADELYANSALQ 400 (518) Q Consensus 321 ~~~~ie~~ln~~l~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~T~NE~R~~~g~~pi~~~~gD~~~~~~n~~ 400 (518) ++..||++||++|++.. +|++..+++.|.+++++.+++++++|++|+||+|+++|++|++ +||.+....... T Consensus 300 ~~~~ie~~ln~~l~~~~------~~~~~~~~~~d~~~~~~~~~~~~~~G~~t~nE~R~~lg~~p~~--~~d~~~~~~~~~ 371 (397) T protein:vir:38 300 YVQAIVGELNDKLHANI------SANIRFAIDAMGDQYASTISSSVKGGTIAGNQARFILQNSGYL--AKDLPDPEKEPQ 371 (397) T ss_pred HHHHHHHHHHHhccChh------cccccccccCCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCC--CCcccccccccc Confidence 99999999999999864 3455556788999999999999999999999999999999996 677554333222 Q ss_pred ccccccccCCCCCCCCCCCCcccCCCCCccCCccccccc Q lcl|Aclame:pro 401 PLGATPDGAVEGEEAPAPKRPASTPVASLDQSPPASVPG 439 (518) Q Consensus 401 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 439 (518) +................ ..+.++++ + T Consensus 372 ~~~~~~~~~~g~~~~~~--------~~e~~~~~-----~ 397 (397) T protein:vir:38 372 QAIQLIQQEGGENDGNN--------SDERGSDP-----E 397 (397) T ss_pred ccccccccccCCCCCCC--------CCCCCCCC-----C Confidence 21111100000000000 00000000 0 No 49 >protein:vir:104259 Length: 403 # NCBI annotation: portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:1504 # MgeName: T5 # Cross-refs: genbank:acc:YP_006980;genbank:gi:46401881;genbank:GeneID:2777676 Probab=100.00 E-value=7.2e-84 Score=476.39 Aligned_cols=385 Identities=15% Similarity=0.219 Sum_probs=310.4 Q ss_pred ccccchhhhhhhccC-------ccCCcccCccchhhHHHHhhhHHHHHHHHHHHHhhccCceEEEEecCCc---eeeecc Q lcl|Aclame:pro 14 MAELSPQMQDSYYYA-------PAVGMQLERQFSLYGGIYKNQPWVRTVIAKRAQALARLPVKCMFTSGDT---ETEEHD 83 (518) Q Consensus 14 ~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~v~~~v~~ia~~ia~lp~~v~~~~~~~---~~~~~~ 83 (518) |+ +.+|+.+...-. .............+.+.|.++++|++||++||+.||++||+++++.... .....+ T Consensus 1 mg-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~v~~cv~~Ia~~ia~~p~~v~~~~~~~~~~~~~~~~ 79 (403) T protein:vir:10 1 MG-FKSWITEKLNPGQRIIRDMEPVSHRTNRKPFTTGQAYSKIEILNRTANMVIDSAAECSYTVGDKYNIVTYANGVKTK 79 (403) T ss_pred Cc-chhhhhhccchhhhhhhcccccccccCCcccccHHHHHHHHHHHHHHHHHHHHHhhCceeEeecccccccccccccc Confidence 32 344544333211 0011112222334567889999999999999999999999999765422 234456 Q ss_pred hHHHHHhhccCccCCHHHHHHHHHHHHHHcCCeeEEeeeCCCCceeeeeeeCCcceEEEeccCcceEEEEeeccCCCCce Q lcl|Aclame:pro 84 TGYAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQKNKSGTPEKLMPMHPSRVAIKRNSRTGRYEYYFQAGAGVGTQ 163 (518) Q Consensus 84 ~~~~~l~~~PN~~~t~~~f~~~~~~~~ll~G~~~~~i~~~~~G~~~~l~~l~p~~v~~~~~~~~~~~~~~~~~~~~~~~~ 163 (518) ++.++|+.+||++||+++||+.++.+++++||+|+++.. ..|+++++..|++..+..+....| + ..+ T Consensus 80 ~l~~lL~~~PN~~~t~~~f~~~~~~~~ll~Gnayi~~~~------~~l~~l~~~~~~v~~~~~~~~~~~-~-~~~----- 146 (403) T protein:vir:10 80 TLDTLLNVRPNPFMDISTFRRLVVTDLLFEGCAYIYWDG------TSLYHVPAALMQVEADANKFIKKF-I-FNN----- 146 (403) T ss_pred hHHHHHhhCCCCCCCHHHHHHHHHHHHhhcCCeEEEEeC------ceeEeecCcceEEEEcCCceEEEE-E-ecC----- Confidence 677788889999999999999999999999999988742 368999999999988765433322 2 211 Q ss_pred eEEEeeeeeEEeecCCC----CcccccchHHHHHHHHHHHHHHHHHHHHHHHHccCCcceeeeeCCcCCHHHHHHHHHHH Q lcl|Aclame:pro 164 LVSFADDEVVPIRFFNP----DGLERGLSLMESLKSTIFSEDSSRNATAAMWKNAGRPNLVLRHEKRLSPEAQQRLREQF 239 (518) Q Consensus 164 ~~~~~~~~vih~~~~~~----~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~p~gil~~~~~~~~e~~~~~~~~~ 239 (518) ...++.++||||+..+. .+..+|+||+..+...+....+++++..++|+||++|++||+.++.+++++++++++.| T Consensus 147 ~~~~~~~eiih~~~~~~~~~~~~~~~G~s~i~~~~~~i~~~~~~~~~~~~~f~ng~~~~gil~~~~~l~~e~~~~~~~~~ 226 (403) T protein:vir:10 147 QINYRVDEIIFIKDNSYVCGTNSQISGQSRVATVIDSLEKRSKMLNFKEKFLDNGTVIGLILETDEILNKKLRERKQEEL 226 (403) T ss_pred ceeecccceEEecccccccCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEeCCCCCHHHHHHHHHHH Confidence 24688899999996543 35678999999999999999999999999999999999999999999999999999999 Q ss_pred HHHhcCccccccceeccCCcccccccC--ChhhHHHHHHHHHHHHHHHHHhccchHhhccccccccccHHHHHHHHHHHH Q lcl|Aclame:pro 240 DRAHAGSSNTGKTMVVEEGMEPIPLQL--TAVEMQFIEARQLNREEVCGVYDIAPPIVHILDRATFSNISAQMRAFYRDT 317 (518) Q Consensus 240 ~~~~~g~~n~g~~~vl~~g~~~~~~~~--~~~d~q~~e~~~~~~~~Ia~~fgVpp~~lg~~~~~~~s~~e~~~~~~~~~~ 317 (518) ++.++|.+|+|+++||++|++|+++++ ++.|+||+|.+++++++||++|||||++||. ++++|++++.+.|+++| T Consensus 227 ~~~~~g~~n~g~~~vl~~g~~~~~~~~~~~~~d~q~~e~~~~~~~~Ia~~fgVPp~~lg~---~~~sn~e~~~~~f~~~t 303 (403) T protein:vir:10 227 QLDYNPSTGQSSVLILDGGMKAKPYSQISSFKDLDFKEDIEGFNKSICLAFGVPQVLLDG---GNNANIRPNIELFYYMT 303 (403) T ss_pred HHHhCCcccCcceeecCCCceeEEecccCCHHHHHHHHHHHHHHHHHHHHhCCCHHHcCC---CCCcCHHHHHHHHHHHH Confidence 999999999999999999999999975 5789999999999999999999999999974 46789999999999999 Q ss_pred HHHHHHHHHHHHHhhhcchhhccceeeechhhh--hccCHHHHHHHHHHHHhCCCcCHHHHHHHHhCCCCCCccCceeee Q lcl|Aclame:pro 318 MAIPIARIQSAMDKYVGQYWVRKNRMKFDIDDV--IQPDWEAKSESTQKMVNSGVATPNEGREIMGLPRSDDPKADELYA 395 (518) Q Consensus 318 l~P~~~~ie~~ln~~l~~~~~~~~~~~fd~~~l--~~~d~~~~~~~~~~~~~~g~~T~NE~R~~~g~~pi~~~~gD~~~~ 395 (518) |.||+++||++||++|. ++++||++.+ ++.|.+++++.+++++++|++|+||+|+++|++|+++++||++++ T Consensus 304 l~P~~~~ie~~l~~~L~------~~~~~d~~~~~~l~~D~~~~~~~~~~~~~~G~lT~NE~R~~~gl~pi~~~~~d~~~~ 377 (403) T protein:vir:10 304 IIPMLNKLTSSLTFFFG------YKITPNTKEVAALTPDKEAEAKHLTSLVNNGIITGNEARSELNLEPLDDEQMNKIRI 377 (403) T ss_pred HHHHHHHHHHHHHHhcC------ceeeeccchhhhcccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCccccccccc Confidence 99999999999999883 3567777654 899999999999999999999999999999999999999999999 Q ss_pred cccccccccccccCCCCCCCCCCCCcccCCCCCccC Q lcl|Aclame:pro 396 NSALQPLGATPDGAVEGEEAPAPKRPASTPVASLDQ 431 (518) Q Consensus 396 ~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 431 (518) |+|+........+...++ ++.+.+++ T Consensus 378 p~n~~~~~~~~~~~e~~~----------~~~~~~g~ 403 (403) T protein:vir:10 378 PANVAGSATGVSGQEGGR----------PKGSTEGD 403 (403) T ss_pred ccccccccccCCCCcCCC----------CCCCcCCC Confidence 999865433222211111 11111111 No 50 >protein:vir:80796 Length: 574 # NCBI annotation: putative portal protein # Family: family:all:2446 # MgeID: mge:1885 # MgeName: phiEF24C # Cross-refs: genbank:acc:YP_001504121;genbank:gi:158079308;genbank:GeneID:5666445 Probab=100.00 E-value=1.6e-83 Score=474.56 Aligned_cols=480 Identities=13% Similarity=0.085 Sum_probs=338.0 Q ss_pred CCCCCCC---CCccccccccchhhh--hhhccCccCCcccCc-c-----------chhhHHHHhhhHHHHHHHHHHHHhh Q lcl|Aclame:pro 1 MLLANGQ---TLSAPAMAELSPQMQ--DSYYYAPAVGMQLER-Q-----------FSLYGGIYKNQPWVRTVIAKRAQAL 63 (518) Q Consensus 1 ~~f~~~~---~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~-~-----------~~~~~~~~~~~~~v~~~v~~ia~~i 63 (518) -+|++.+ +......+...+.+. .+..+....+...+. . .-+..-+..+...|++|+.+|+.++ T Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~iv~~~i~~~~~~V~~~~~~i~~~i 119 (574) T protein:vir:80 40 EPYSMESIEKGMNGKTTAYMQPIIGEMSVNPGYKTKPSIRNSQDLHKTLKKFGNNIILNAIINTRSNQVSMYCKPARNSE 119 (574) T ss_pred cCCCHHHHHHhHhhhcccccchhhhhccccccccCcCccCCcccHHHHHHhhccChhHHHHHHHHHHHHHHHHHHHHhhh Confidence 3455432 111111111111111 111111111111110 0 1112223445566778888888888 Q ss_pred ccCceEEEEecCCc----eeeecchHHHHHhhc----cCccC-CHHHHHHHHHHHHHHcCCeeEEeeeCCCCceeeeeee Q lcl|Aclame:pro 64 ARLPVKCMFTSGDT----ETEEHDTGYAKLLAD----PCEYL-DPFAFWEWVASTLDIYGETYLAIQKNKSGTPEKLMPM 134 (518) Q Consensus 64 a~lp~~v~~~~~~~----~~~~~~~~~~~l~~~----PN~~~-t~~~f~~~~~~~~ll~G~~~~~i~~~~~G~~~~l~~l 134 (518) |+|||+|++++.++ ......|+++.|+.+ |||++ |+.+|++.++.+++++||+|++++++.+|++++|||+ T Consensus 120 a~lp~~i~~kd~~~~~~~~~~~~~~~l~~ll~~~~~~~nP~~~s~~ef~~~lv~~lll~Gnayi~i~r~~~G~~~~L~pl 199 (574) T protein:vir:80 120 TGVGYEIRLKDIEAEPTSHDIANIKRIESFLENTAQFRDPNRDNFTTFCKKLVRATYMYDQVNFEKVFDKDGNFIKFDTV 199 (574) T ss_pred ccCceEEEEeccCCCccchhhhhhhHHHHHHhccCCCCCCccccHHHHHHHHHHHHHhcCCeEEEEEECCCCcEEEEEEE Confidence 99999999876543 223456667766653 55654 8889999999999999999999999999999999999 Q ss_pred CCcceEEEeccCcc-----eEEEEeeccCCCCceeEEEeeeeeEEeecCCCCc---ccccchHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 135 HPSRVAIKRNSRTG-----RYEYYFQAGAGVGTQLVSFADDEVVPIRFFNPDG---LERGLSLMESLKSTIFSEDSSRNA 206 (518) Q Consensus 135 ~p~~v~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~vih~~~~~~~~---~~~G~s~~~~~~~~i~~~~~~~~~ 206 (518) +|.+|++..+.++. ..+|.+. .++....|++++||||+++...+ ..||+||+..+..+|..+.+++++ T Consensus 200 ~p~~V~v~~d~~~~~~~~~~~y~~~~----~g~~~~~~~~~eiih~~~~~~~~~~~~~~G~spi~~a~~~i~~~~~a~~~ 275 (574) T protein:vir:80 200 DPTTIFLATNGEGKLIKNGERFVQVI----DNRIVAKFNERELAFAVRNPRADIEVGQYGYPELEIALKQFIAHENTEVF 275 (574) T ss_pred cCceeEEEEcCccccccCceEEEEEe----CCceEEEEccccEEEEeccCCCCcccccccccHHHHHHHHHHHHHHHHHH Confidence 99999999876653 2333332 34566789999999999765443 458999999999999999999999 Q ss_pred HHHHHHccCCcceeeeeCC--cCCHHHHHHHHHHHHHHhcCccccccceec-cCCcccccccCChhhHHHHHHHHHHHHH Q lcl|Aclame:pro 207 TAAMWKNAGRPNLVLRHEK--RLSPEAQQRLREQFDRAHAGSSNTGKTMVV-EEGMEPIPLQLTAVEMQFIEARQLNREE 283 (518) Q Consensus 207 ~~~~~~ng~~p~gil~~~~--~~~~e~~~~~~~~~~~~~~g~~n~g~~~vl-~~g~~~~~~~~~~~d~q~~e~~~~~~~~ 283 (518) +.++|+||++|+|||+++. .+++++++++++.|++.++|..|+|+++++ ++|++|+++++++.|+||+|++++++++ T Consensus 276 ~~~~f~ng~~p~gil~~~~~~~ls~e~~~~lk~~~~~~~~G~~n~g~~~vl~~~G~~~~~l~~s~~D~qfle~~~~~~~~ 355 (574) T protein:vir:80 276 NDRFFSHGGTTRGILHVKTGQQQSQQALDIFRREWRSSLAGINGSWQIPVVSAEDVKFVNMTPSANDMQFEKWLNYLINV 355 (574) T ss_pred HHHHHhccCCCceEEEeCCCCCCCHHHHHHHHHHHHHHhccccccccceeecCCCceEEEccCChhHHHHHHHHHHHHHH Confidence 9999999999999999864 479999999999999999999999997655 7899999999999999999999999999 Q ss_pred HHHHhccchHhhcccccc----------ccccHHHHHHHHHHHHHHHHHHHHHHHHHhhhcchhhccceeeechhhhhcc Q lcl|Aclame:pro 284 VCGVYDIAPPIVHILDRA----------TFSNISAQMRAFYRDTMAIPIARIQSAMDKYVGQYWVRKNRMKFDIDDVIQP 353 (518) Q Consensus 284 Ia~~fgVpp~~lg~~~~~----------~~s~~e~~~~~~~~~~l~P~~~~ie~~ln~~l~~~~~~~~~~~fd~~~l~~~ 353 (518) ||++|||||++||+.+.+ +++|+|++.+.|+++||+|++.+||++||++|++..+..++++|+..+++.. T Consensus 356 Ia~afgVPp~~lG~~~~~t~~gs~~~~~n~sn~E~~~~~f~~~tL~P~~~~ie~~ln~~Ll~~~~~~~~~~f~~~d~~~~ 435 (574) T protein:vir:80 356 ISALYGIDPAEINFPNNGGATGSKGGSLNEGNSKEKMQASQNKGLQPLLRFIEDTVNTYIVAEFGEKYQFQFRGGDLSAQ 435 (574) T ss_pred HHHHhCCCHHHhcccccccccccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcCCceEEEecccchhhH Confidence 999999999999986543 5789999999999999999999999999999998888888889987666543 Q ss_pred CHHHHHHHHHHHHhCCCcCHHHHHHHHhCCCCCCccCceeeecccccccccccccCCCCCCCC--CCCCcccC----CCC Q lcl|Aclame:pro 354 DWEAKSESTQKMVNSGVATPNEGREIMGLPRSDDPKADELYANSALQPLGATPDGAVEGEEAP--APKRPAST----PVA 427 (518) Q Consensus 354 d~~~~~~~~~~~~~~g~~T~NE~R~~~g~~pi~~~~gD~~~~~~n~~~~~~~~~~~~~~~~~~--~~~~~~~~----~~~ 427 (518) +.. . .+..++.+||||+||+|+++||||++ |||++++|.|+++++..........+.. ...++.+. +.. T Consensus 436 ~~~--~-~~~~~~~~G~lT~NE~R~~lgl~Pi~--gGD~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 510 (574) T protein:vir:80 436 LDK--L-KIIEQEGKVFRTVNEIRHDKGLEPIK--GGDVILNGVHIQAIGQALQEEQLEYQRSQDRLNRLLELSGGDVEQ 510 (574) T ss_pred HHH--H-HHHHHHhCCccCHHHHHHHhCCCCCC--CCCEeeeccceeecccccccccCCccchhccccccccccCCCCCC Confidence 322 2 22357889999999999999999996 8999999999999986543332211111 11111111 111 Q ss_pred CccCCccccccccChhhhcch-hHHHHHHHHH-HhhccCcchhHHHHHHHHHHHhhhhhhhccc Q lcl|Aclame:pro 428 SLDQSPPASVPGLSPTNSDRS-TDSGKTEPRR-LMQKPPPKESSPKHLRAVKGAMGRGKDIKGF 489 (518) Q Consensus 428 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~ 489 (518) +....+.....++.....+.. ...+...... ......++|.+.+.++++++-.+.++...-. T Consensus 511 ~~~~~p~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 574 (574) T protein:vir:80 511 PEPEEPKDSQNDTDVSFQDEQQGLNGKSKKVNGKVDDNVGKDGQLKSEENTNSTKHGTDGIKKE 574 (574) T ss_pred CCCCCCCCccccccchhhhhhhhhccchhhhcCCcccccccccccccccccccccccCccccCC Confidence 111111111111111111111 1111111111 1223567899999999998888877655443 No 51 >protein:vir:80644 Length: 551 # NCBI annotation: gp23 # Family: family:all:2446 # MgeID: mge:1883 # MgeName: A511 # Cross-refs: genbank:acc:YP_001468463;genbank:gi:157325038;genbank:GeneID:5601615 Probab=100.00 E-value=1.5e-83 Score=474.66 Aligned_cols=463 Identities=11% Similarity=0.090 Sum_probs=320.3 Q ss_pred CCCCCCCCCccccccccchhhhhh-hc-cCccCCcccCc-cchhhHHHHhhhHHHHHHHHHHHHhhcc-----------C Q lcl|Aclame:pro 1 MLLANGQTLSAPAMAELSPQMQDS-YY-YAPAVGMQLER-QFSLYGGIYKNQPWVRTVIAKRAQALAR-----------L 66 (518) Q Consensus 1 ~~f~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~-~~~~~~~~~~~~~~v~~~v~~ia~~ia~-----------l 66 (518) |.+--+++...+..+..++.+... +. +....+...+. +.......|..+|+|++||++||++||+ + T Consensus 39 ~~~~~~k~~~~~~~a~~~~~~~~~~~~~~~~~r~~~~~~~~l~~~~~~~~~npiv~~~I~~ia~~IA~~~~~~~~~~~g~ 118 (551) T protein:vir:80 39 EQEQISKAMNNKEVAYSQPVIGSMSANPGFKTKPSIRNNQDLHGVLKKFGGNIILNAIINTRSNQVSMYCKPARHSEKGV 118 (551) T ss_pred cHHHHHHhhccCcceeecccccceecCcccccCccccChhHHHHHHHHhhcCHHHHHHHHHHHHHHhhhhhhhhhhcCCC Confidence 333223333333333334443211 11 11111111111 1122345678899999999999999997 4 Q ss_pred ceEEEEecCCceee----ecchHHHHHhhccCcc-----CCHHHHHHHHHHHHHHcCCeeEEeeeCCCCceeeeeeeCCc Q lcl|Aclame:pro 67 PVKCMFTSGDTETE----EHDTGYAKLLADPCEY-----LDPFAFWEWVASTLDIYGETYLAIQKNKSGTPEKLMPMHPS 137 (518) Q Consensus 67 p~~v~~~~~~~~~~----~~~~~~~~l~~~PN~~-----~t~~~f~~~~~~~~ll~G~~~~~i~~~~~G~~~~l~~l~p~ 137 (518) +|.+..++.+.... ...+.+..++.+||++ +|+.+|+++++.+++++||+|++++++.+|++++||||+|. T Consensus 119 ~~~i~~kd~~~~~~~~~~~~~~~i~~~l~~pn~~~~p~~~s~~~f~~~lv~dlll~Gnay~~i~rd~~G~~~~L~~l~p~ 198 (551) T protein:vir:80 119 GFEVRLKDLDKKPTSHDEATIKRIESFIEKTGVDNDINRDSFSSFVKKIVRDTYMYDQVNFEKVFNRNQSMVRFVAKDPT 198 (551) T ss_pred CceEEecccCcccChhHHHHHHHHHHHHHhcCCCCCCccchHHHHHHHHHHHHHhcCCEEEEEEECCCCcEEEEEEeCCc Confidence 55554443332211 1223567788999987 48889999999999999999999999999999999999999 Q ss_pred ceEEEeccCcceE---EEEeeccCCCCceeEEEeeeeeEEeecCCCC---cccccchHHHHHHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 138 RVAIKRNSRTGRY---EYYFQAGAGVGTQLVSFADDEVVPIRFFNPD---GLERGLSLMESLKSTIFSEDSSRNATAAMW 211 (518) Q Consensus 138 ~v~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~vih~~~~~~~---~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~ 211 (518) +|++..+.++... .+++.. ..++..+.|++++|||+++++.. ...||+||+..+..+|..+.++++++.++| T Consensus 199 ~V~v~~~~~g~~~~~~~~y~~~--~~g~~~~~~~~~eiiH~~~n~~~~~~~~~~G~spi~~a~~~i~~~~a~~~~~~~~f 276 (551) T protein:vir:80 199 TIFFATTADGKIPDNGNRFVQV--IDQKIVATFNAREMAFAVRNPRSDIYATGYGYPELEIALKQFIAHENTEAFNDRFF 276 (551) T ss_pred eeEEEECCccccccCceEEEEE--eCCcEEEEEcccceEEecccCCCCcccccccccHHHHHHHHHHHHHHHHHHHHHHH Confidence 9999988776432 122222 22445678999999999976543 356899999999999999999999999999 Q ss_pred HccCCcceeeeeCC--cCCHHHHHHHHHHHHHHhcCccccccceec-cCCcccccccCChhhHHHHHHHHHHHHHHHHHh Q lcl|Aclame:pro 212 KNAGRPNLVLRHEK--RLSPEAQQRLREQFDRAHAGSSNTGKTMVV-EEGMEPIPLQLTAVEMQFIEARQLNREEVCGVY 288 (518) Q Consensus 212 ~ng~~p~gil~~~~--~~~~e~~~~~~~~~~~~~~g~~n~g~~~vl-~~g~~~~~~~~~~~d~q~~e~~~~~~~~Ia~~f 288 (518) +||++|+|+|+++. .+++++++++++.|++.++|.+|+|+++|+ ++|++|+++++++.|+||+|++++++++||++| T Consensus 277 ~Ng~~p~giL~~~~~~~lt~e~~~~lk~~~~~~~~G~~nag~~~vl~~~g~~~~~l~~~~~D~qfle~~~~~~~~Ia~aF 356 (551) T protein:vir:80 277 SHGGTTRGILQIKAAQQQSQHALEIFKREWKNSLSGINGSWQIPVVSAEDVKFVNMTPSARDMEFEKWLNYLINVISALY 356 (551) T ss_pred HcCCCcceEEEEcCCCCCCHHHHHHHHHHHHHHhcCccccCccccccCCCceEEEccCChhHHHHHHHHHHHHHHHHHHh Confidence 99999999998864 489999999999999999999999998776 579999999999999999999999999999999 Q ss_pred ccchHhhccccc----------cccccHHHHHHHHHHHHHHHHHHHHHHHHHhhhcchhhccceeeechhhhhccCHHHH Q lcl|Aclame:pro 289 DIAPPIVHILDR----------ATFSNISAQMRAFYRDTMAIPIARIQSAMDKYVGQYWVRKNRMKFDIDDVIQPDWEAK 358 (518) Q Consensus 289 gVpp~~lg~~~~----------~~~s~~e~~~~~~~~~~l~P~~~~ie~~ln~~l~~~~~~~~~~~fd~~~l~~~d~~~~ 358 (518) ||||++||+.+. .+++|++++...|+++||+||+.+||++||++|++.++..++|+|+ .+...+..++ T Consensus 357 gVPp~~lG~~~~~~~~~~~~~s~t~sn~e~~~~~f~~~tL~P~~~~ie~~ln~~L~~~~~~~~~f~f~--~~~~~~~~~~ 434 (551) T protein:vir:80 357 GIDPAEINIPNNGGATGSKGGSLNEGNSAEKNQASKNKGLQPLLGFIEDFINKHIVAEFGDKYTFQFV--GGDIKSELES 434 (551) T ss_pred cCCHHHcCcccccccccccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCceEEEee--ccChhhHHHH Confidence 999999997543 3789999999999999999999999999999999877666555554 6667777777 Q ss_pred HHHHHHHHhCCCcCHHHHHHHHhCCCCCCccCceeeecccccccccccccCCCCCCC--CCCC---CcccCCC-CCccCC Q lcl|Aclame:pro 359 SESTQKMVNSGVATPNEGREIMGLPRSDDPKADELYANSALQPLGATPDGAVEGEEA--PAPK---RPASTPV-ASLDQS 432 (518) Q Consensus 359 ~~~~~~~~~~g~~T~NE~R~~~g~~pi~~~~gD~~~~~~n~~~~~~~~~~~~~~~~~--~~~~---~~~~~~~-~~~~~~ 432 (518) +++++ ++.+|+||+||+|+++||+|.. ||||+++.|.++.+++............ ...+ +...++. .+..++ T Consensus 435 ~~~~~-~~~~g~lT~NE~R~~~gl~P~~-egGD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 512 (551) T protein:vir:80 435 VKILA-EKAKVAMTVNEVRKELNLPGDV-IGGDIPLNGVIVQRIGQLMQQEQFEHEKQQSNLQMLQEQTGNRVSTDVEDI 512 (551) T ss_pred HHHHH-HHhcCCcCHHHHHHHhCCCCCC-CCCceeecccccccccccccccCcchhhhhhccccccCcCCCCCCCCCCCC Confidence 77654 6678999999999999999843 4999999999998876544322111000 0000 0000000 000000 Q ss_pred ccc--cccccChhhhcchhHHHHHHHHHHhhccCcchhHH Q lcl|Aclame:pro 433 PPA--SVPGLSPTNSDRSTDSGKTEPRRLMQKPPPKESSP 470 (518) Q Consensus 433 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~ 470 (518) +.. ......++.+.+. +.+....+........+|++. T Consensus 513 p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 551 (551) T protein:vir:80 513 PDGKDTTGDIGKDGQRKD-KDNANAGKQGMKGDKPNDWQT 551 (551) T ss_pred CCccccCCCccccccccC-ccccchhhhhcCCCCccccCC Confidence 000 0011111111000 011111111111111222222 No 52 >protein:vir:95378 Length: 406 # NCBI annotation: phage portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:1567 # MgeName: GBSV1 # Cross-refs: genbank:acc:YP_764474;genbank:gi:115334628;genbank:GeneID:5179265 Probab=100.00 E-value=5.3e-83 Score=471.63 Aligned_cols=396 Identities=16% Similarity=0.174 Sum_probs=320.7 Q ss_pred CC---CCCCCCCccccccccchhhhhhh-ccCccCCcccCccchhhHHHHhhhHHHHHHHHHHHHhhccCceEEEEecCC Q lcl|Aclame:pro 1 ML---LANGQTLSAPAMAELSPQMQDSY-YYAPAVGMQLERQFSLYGGIYKNQPWVRTVIAKRAQALARLPVKCMFTSGD 76 (518) Q Consensus 1 ~~---f~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~v~~ia~~ia~lp~~v~~~~~~ 76 (518) =| |.+....+... ..+.....+ .+.... ...+....++++++|++||++||++||++||++++.+++ T Consensus 2 g~f~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~ 72 (406) T protein:vir:95 2 GLFDRWRRTKRKSKIR---ADTGYVGLFMSGEDVS------FLVPGYVRLSDNPEVRMAVHKIADLISSMTIYLMQNTED 72 (406) T ss_pred cchhhhcccccccccc---ccchhhhhhccCcccC------ccccCHHHHhhcHHHHHHHHHHHHhhccCceEEEEecCC Confidence 12 22222111111 111211222 111111 122334667899999999999999999999999999988 Q ss_pred ceeeecchHHHHHhhccCccCCHHHHHHHHHHHHHHcCCe--eEEeeeCCCCceeeeeeeCCcceEEEeccCcceEEEEe Q lcl|Aclame:pro 77 TETEEHDTGYAKLLADPCEYLDPFAFWEWVASTLDIYGET--YLAIQKNKSGTPEKLMPMHPSRVAIKRNSRTGRYEYYF 154 (518) Q Consensus 77 ~~~~~~~~~~~~l~~~PN~~~t~~~f~~~~~~~~ll~G~~--~~~i~~~~~G~~~~l~~l~p~~v~~~~~~~~~~~~~~~ 154 (518) +.....++.+++|+.+||++||+++||+.++.+++++|++ |+++.++..|++++|||++|.+|++..+.++ |.| T Consensus 73 ~~~~~~~~~~~~l~~~PN~~~t~~~f~~~~~~~~ll~g~g~a~~~~~~~~~g~~~~l~~i~~~~v~~~~~~~~----~~~ 148 (406) T protein:vir:95 73 GDIRIRNELSRKIDITPYSLMTRKSWMYNIVYTMLLDGEGNSVVFPKYTADGLIDELVPLTPSKVNFLDTPDG----YQV 148 (406) T ss_pred cceeecchHHHHHhhccCCCCCHHHHHHHHHHHHHhcCCceEEEEEEECCCCcEEEEEEEcCceeEEEEcCCe----EEE Confidence 8888889999999999999999999999999999999765 5667888899999999999999999988765 333 Q ss_pred eccCCCCceeEEEeeeeeEEeecC-CCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHccCCcceeeeeCCcCCHHHHH Q lcl|Aclame:pro 155 QAGAGVGTQLVSFADDEVVPIRFF-NPDGLERGLSLMESLKSTIFSEDSSRNATAAMWKNAGRPNLVLRHEKRLSPEAQQ 233 (518) Q Consensus 155 ~~~~~~~~~~~~~~~~~vih~~~~-~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~p~gil~~~~~~~~e~~~ 233 (518) .+. + ..|++++|||++++ ++...++|+||+..+..++....++++++.++|+||++|+++++++..+++++.+ T Consensus 149 ~~~----~--~~~~~~evih~~~~~~~~~~~~G~s~i~~~~~~i~~~~~~~~~~~~~~~ng~~~~~il~~~~~l~~e~~~ 222 (406) T protein:vir:95 149 LYG----G--QTFNYDEVLHFIYNPDPERPYIGRGYRVVLKDIADNLKQATATKKSFMSGKYMPSLIVKVDAATAELSSE 222 (406) T ss_pred Eec----c--EEEchhHEEEeeccCCCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEeCCCCCHHHHH Confidence 221 1 36899999999964 5555678999999999999999999999999999999999999999999999999 Q ss_pred HHHHHHHHHhcCccccccceeccC-Cccccccc-CChhhHHHHHHHHHHHHHHHHHhccchHhhccccccccccHHHHHH Q lcl|Aclame:pro 234 RLREQFDRAHAGSSNTGKTMVVEE-GMEPIPLQ-LTAVEMQFIEARQLNREEVCGVYDIAPPIVHILDRATFSNISAQMR 311 (518) Q Consensus 234 ~~~~~~~~~~~g~~n~g~~~vl~~-g~~~~~~~-~~~~d~q~~e~~~~~~~~Ia~~fgVpp~~lg~~~~~~~s~~e~~~~ 311 (518) +++++|.+.+.|..|+|+++|++. |.+++++. +++.|+||+|.+++++++||++|||||++||..+ +.+++.. T Consensus 223 ~~~~~~~~~~~g~~n~~~~~v~~~~~~~~~~~~~~~~~d~q~~e~~~~~~~~Ia~~fgVp~~~lg~~~-----~~~~~~~ 297 (406) T protein:vir:95 223 EGRNAVFKKYLQATEAGQPWIIPAELLEVEQVKPLSLKDIAINEAVELDKRTVAGMFGVPAFLLGIGE-----FNRDEYN 297 (406) T ss_pred HHHHHHHHHhccccccCCceeecCCCccccccccCChhHHHHHHHHHHHHHHHHHHhCCCHHHcCCCC-----chHHHHH Confidence 999999999999999999998865 45666654 6899999999999999999999999999998532 4588889 Q ss_pred HHHHHHHHHHHHHHHHHHHhhhcchhhccceeeechhhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHHhCCCCCCccCc Q lcl|Aclame:pro 312 AFYRDTMAIPIARIQSAMDKYVGQYWVRKNRMKFDIDDVIQPDWEAKSESTQKMVNSGVATPNEGREIMGLPRSDDPKAD 391 (518) Q Consensus 312 ~~~~~~l~P~~~~ie~~ln~~l~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~T~NE~R~~~g~~pi~~~~gD 391 (518) .|+++||.||+++||++||++|++. ..++++||++.+++.|.+++++.+.+++++|++|+||+|+++|++|++ ||| T Consensus 298 ~~~~~~l~P~~~~ie~~l~~~l~~~--~~~~~~fd~~~l~~~d~~~~~~~~~~l~~~G~~t~NE~R~~~gl~p~~--~gd 373 (406) T protein:vir:95 298 NFINSTILPIAKGIEQELTRKLLIS--PDLYFKFNPRSLYAYDLKELAEVGSNMYVRGIMEGNEVRDWLGLSPKE--GLS 373 (406) T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCC--CCcEEEeechhhhcCCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCC--Ccc Confidence 9999999999999999999999875 346899999999999999999999999999999999999999999996 799 Q ss_pred eeeecccccccccccccCCCCCCCCCCCCcccCCCCCccCCc Q lcl|Aclame:pro 392 ELYANSALQPLGATPDGAVEGEEAPAPKRPASTPVASLDQSP 433 (518) Q Consensus 392 ~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 433 (518) ++++|+|++|++........ +.++.... .++.. T Consensus 374 ~~~~~~n~~~~~~~~~~~~~--------k~g~~~~~-~~~~~ 406 (406) T protein:vir:95 374 ELVILENYIPLDKIGDQSKL--------KGGDNSGA-DGQTD 406 (406) T ss_pred eeeeccCccchhhccccccc--------CCCCCCCC-CCCCC Confidence 99999999999765432211 00000000 00000 No 53 >protein:vir:96579 Length: 576 # NCBI annotation: ORF012 # Family: family:all:2446 # MgeID: mge:1623 # MgeName: Twort # Cross-refs: genbank:acc:YP_238542;genbank:gi:66391267;genbank:GeneID:5130361 Probab=100.00 E-value=2.4e-83 Score=473.49 Aligned_cols=482 Identities=14% Similarity=0.138 Sum_probs=334.3 Q ss_pred CCCC-------CCCCCccccccccchhhhhhhccCccCCcccCcc-------chhhHHHHhhhHHHHHHHHHHHHhhcc- Q lcl|Aclame:pro 1 MLLA-------NGQTLSAPAMAELSPQMQDSYYYAPAVGMQLERQ-------FSLYGGIYKNQPWVRTVIAKRAQALAR- 65 (518) Q Consensus 1 ~~f~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~v~~~v~~ia~~ia~- 65 (518) -++- .+.+..+..++...|.+....+.. +.+..+. ...+...+..+|+|++||++||+.||+ T Consensus 34 ~~~~~~~~~~~~~~~~~~~~~a~~~p~~~~~~~~~---~~~~~p~~~~~~~~~~~~l~~~~~npiv~~~I~~ia~~vA~~ 110 (576) T protein:vir:96 34 NIRNIEEKSKELNKSLYGKQQAYAEPFLEVMDTNP---EFRTKRSYMKNSDNLHDVLKQFGNNPILNAIILTRSNQVAMY 110 (576) T ss_pred HHHHhhhhhhhhccccCCccchhhcceeeeeecCC---CccccCcchhhhhhhHHHHHHhhcCHHHHHHHHHHHHHHHhh Confidence 0000 112222223333333322222211 1111111 112234566899999999999999997 Q ss_pred ----------CceEEEEecCCce----eeec----chHHHHHhhccCcc-CCHHHHHHHHHHHHHHcCCeeEEeeeCC-- Q lcl|Aclame:pro 66 ----------LPVKCMFTSGDTE----TEEH----DTGYAKLLADPCEY-LDPFAFWEWVASTLDIYGETYLAIQKNK-- 124 (518) Q Consensus 66 ----------lp~~v~~~~~~~~----~~~~----~~~~~~l~~~PN~~-~t~~~f~~~~~~~~ll~G~~~~~i~~~~-- 124 (518) ++|.+..+..+.. .... .+.+..++..|||. +|+.+|++.++.+++++||+|++++++. T Consensus 111 ~~~~~~~~~~~~~~i~lk~~~~~~~~~~~~~~~~l~~~l~~~~~~~~p~~~t~~~f~~~lv~dlll~Gna~~~i~~~rd~ 190 (576) T protein:vir:96 111 CQPSRYNERGLGFEVRMRDLDAEPGKKEKEEIKRIENFILNTGRDKDIDRDSFQSFCRKIVRDTYTYDQVNFEKVFNKKN 190 (576) T ss_pred hhhhhhccccccceeEEecCcCccchhhhHhhhhHHhhHhhccCCCCCccccHHHHHHHHHHHHHhcCCeEEEEEEecCC Confidence 3444443333221 1111 12334444556665 5899999999999999999999998654 Q ss_pred CCceeeeeeeCCcceEEEeccCcceEEEEee-ccCCCCceeEEEeeeeeEEeecCC-CC--cccccchHHHHHHHHHHHH Q lcl|Aclame:pro 125 SGTPEKLMPMHPSRVAIKRNSRTGRYEYYFQ-AGAGVGTQLVSFADDEVVPIRFFN-PD--GLERGLSLMESLKSTIFSE 200 (518) Q Consensus 125 ~G~~~~l~~l~p~~v~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~vih~~~~~-~~--~~~~G~s~~~~~~~~i~~~ 200 (518) .|++++|||++|.+|++..+.++....+... .....++....+++++|||++++. .+ ...||+||+.++..+|..+ T Consensus 191 ~g~~~~L~pl~p~~V~v~~~~dg~~~~~~~~~~~~~~~~~~~~~~~~dii~~~~~~~~d~~~~~~G~Spi~~a~~~i~~~ 270 (576) T protein:vir:96 191 ATTMDKFIAVDPSTIFYATDKNGKIIKGGKRFVQVINKKVVASFTSREMAMGIRNPRTELSSSGYGLSEVEIAMKQFIAY 270 (576) T ss_pred CCceEEEEEeCCceeEEEECCCCceeeeeeEEEEecCCceEEEecccceEEEeecCCCCcccCcccccHHHHHHHHHHHH Confidence 5789999999999999999888765433221 112334566788999998776543 32 3568999999999999999 Q ss_pred HHHHHHHHHHHHccCCcceeeeeCC--cCCHHHHHHHHHHHHHHhcCccccccc-eeccCCcccccccCChhhHHHHHHH Q lcl|Aclame:pro 201 DSSRNATAAMWKNAGRPNLVLRHEK--RLSPEAQQRLREQFDRAHAGSSNTGKT-MVVEEGMEPIPLQLTAVEMQFIEAR 277 (518) Q Consensus 201 ~~~~~~~~~~~~ng~~p~gil~~~~--~~~~e~~~~~~~~~~~~~~g~~n~g~~-~vl~~g~~~~~~~~~~~d~q~~e~~ 277 (518) .++++++.++|+||++|+|||+++. .+++++++++++.|++.++|..|+|++ +|+++|++|+++++++.|+||+|++ T Consensus 271 ~~~~~~~~~~f~Ng~~p~giL~~~~~~~ls~e~~~~lr~~~~~~~~G~~nag~~p~vl~~G~~~~~ls~~~~d~qfle~~ 350 (576) T protein:vir:96 271 NNTETFNDRFFSHGGTTRGILQIKSEQQQSQRALENFKREWKSSFSGINGSWQVPVVMADDIKFVNMTPTANDMQFEKWL 350 (576) T ss_pred HHHHHHHHHHHhccCCCceEEEeCCCCCCCHHHHHHHHHHHHHHhccccccccceeecCCCceEEeccCChhhHHHHHHH Confidence 9999999999999999999999875 469999999999999999999999995 8899999999999999999999999 Q ss_pred HHHHHHHHHHhccchHhhcccccc-----------ccccHHHHHHHHHHHHHHHHHHHHHHHHHhhhcchhhccceeeec Q lcl|Aclame:pro 278 QLNREEVCGVYDIAPPIVHILDRA-----------TFSNISAQMRAFYRDTMAIPIARIQSAMDKYVGQYWVRKNRMKFD 346 (518) Q Consensus 278 ~~~~~~Ia~~fgVpp~~lg~~~~~-----------~~s~~e~~~~~~~~~~l~P~~~~ie~~ln~~l~~~~~~~~~~~fd 346 (518) ++++++||++|||||++||+.+.+ +++|+|++.+.|+++||+||+.+||++||++|++..+..++++| T Consensus 351 ~~~~~~Ia~afgVPp~~lG~~~~~~~~g~~~~~s~t~sn~e~~~~~f~~~tL~P~~~~ie~~ln~~Ll~~~~~~~~~~f- 429 (576) T protein:vir:96 351 TYLINIISALYGIDPAEIGFPNRGGATGGKGGNTLNEADPGKKQQQSQNKGLQPLLRFIEDLINTHIISEYSDKYVFQF- 429 (576) T ss_pred HHhHHHHHHHhCCCHHHccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHhhhchhccCceEEEe- Confidence 999999999999999999986543 78999999999999999999999999999999987766655555 Q ss_pred hhhhhccCHHHHHHHHHHH--HhCCCcCHHHHHHHHhCCCCCCccCceeeecccccccccccccCCCCCCCCCCC--Ccc Q lcl|Aclame:pro 347 IDDVIQPDWEAKSESTQKM--VNSGVATPNEGREIMGLPRSDDPKADELYANSALQPLGATPDGAVEGEEAPAPK--RPA 422 (518) Q Consensus 347 ~~~l~~~d~~~~~~~~~~~--~~~g~~T~NE~R~~~g~~pi~~~~gD~~~~~~n~~~~~~~~~~~~~~~~~~~~~--~~~ 422 (518) ++.|.+++++.++.+ +.+|+||+||+|+++||||++ |||+++.|.++.+++..........+..+.. .+. T Consensus 430 ----~r~d~~~~~e~~~~~~~~~~G~lT~NE~R~~~gl~pie--gGD~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~ 503 (576) T protein:vir:96 430 ----VGGDTKSELDKIKILQEEVKTYKTVNEARKEKGLKPIE--GGDVLLDGSFIQSMSLNTQKEQYEDTKQKERFDMIQ 503 (576) T ss_pred ----ccCCHHHHHHHHHHHHHHhcCccCHHHHHHHhCCCCCC--CcceeccccccccccccccCCCCCCccccccccccc Confidence 467888887777654 567999999999999999996 8999999999988875443222211111110 000 Q ss_pred cCCCCCccCCccccccccChhhhcchhHHHHHHH---HHHhhccCcchhHHHHHHHHHHHhhhhhhhcccccchh Q lcl|Aclame:pro 423 STPVASLDQSPPASVPGLSPTNSDRSTDSGKTEP---RRLMQKPPPKESSPKHLRAVKGAMGRGKDIKGFALQLA 494 (518) Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 494 (518) +....+.... +.....++..+.....+.+..+. +....|...+.-+.+|.+.+..++|++++ .+-.|+-. T Consensus 504 ~~~~~~~~~~-~~~~s~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 576 (576) T protein:vir:96 504 QFLNSPDDEE-PQQESTEDKVDGRESNDPTKIDSPVGTDGQLKDQDNVKSQEGSNKGQGTKGKGNE-KPSDFKNN 576 (576) T ss_pred cccCCCCCCC-CCCCCCCCcccccccccCCCCCCccccccccCCCCcccccccccccccccccCCC-CcccccCC Confidence 0000000000 00011111111111111111111 22234666677778888888899998875 44344433 No 54 >protein:vir:80134 Length: 403 # NCBI annotation: Phage portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:1877 # MgeName: bacteriophage bv1 # Cross-refs: genbank:acc:YP_001425602;genbank:gi:155042935;genbank:GeneID:5469563 Probab=100.00 E-value=1.1e-82 Score=469.94 Aligned_cols=394 Identities=15% Similarity=0.182 Sum_probs=315.6 Q ss_pred CCCCCCCCCccccccccchhhhhhhccCccCCcccCccchhhHHHHhhhHHHHHHHHHHHHhhccCceEEEEecCCceee Q lcl|Aclame:pro 1 MLLANGQTLSAPAMAELSPQMQDSYYYAPAVGMQLERQFSLYGGIYKNQPWVRTVIAKRAQALARLPVKCMFTSGDTETE 80 (518) Q Consensus 1 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~v~~ia~~ia~lp~~v~~~~~~~~~~ 80 (518) -.|+++... .+.. ..+ ++ ..........+.. ...+.++++|++||++||++||++|+++|++.+++... T Consensus 5 ~~f~~k~~~-~~~~-~~~-~~---~~~~~~~~~~~~~-----~~~~~~~~~V~~~I~~ia~~iA~~p~~~~~~~~~g~~~ 73 (403) T protein:vir:80 5 NFFRRKTRS-EPTN-AIS-WF---LTQEAYDTLAIPG-----YTRLSDNPEVRMAVHKIAELISSMTIHLMQNTDNGDIR 73 (403) T ss_pred ccccccccc-cccc-hhh-hh---cccccccccccch-----hhhhhhhHHHHHHHHHHHHhhhhCceEEEEecCCceee Confidence 124443322 2111 111 11 1111111111111 11245689999999999999999999999998888777 Q ss_pred ecchHHHHHhhccCccCCHHHHHHHHHHHHHHc--CCeeEEeeeCCCCceeeeeeeCCcceEEEeccCcceEEEEeeccC Q lcl|Aclame:pro 81 EHDTGYAKLLADPCEYLDPFAFWEWVASTLDIY--GETYLAIQKNKSGTPEKLMPMHPSRVAIKRNSRTGRYEYYFQAGA 158 (518) Q Consensus 81 ~~~~~~~~l~~~PN~~~t~~~f~~~~~~~~ll~--G~~~~~i~~~~~G~~~~l~~l~p~~v~~~~~~~~~~~~~~~~~~~ 158 (518) ..++..++|+.+||++||+++||+.++.++++. ||+|++++++..|++++|||++|.+|++..+.++..+.|. T Consensus 74 ~~~~~~~lL~~~PN~~~t~~~f~~~~v~~~ll~~~Gna~i~~~~~~~g~~~~L~~l~p~~v~~~~~~~g~~~~y~----- 148 (403) T protein:vir:80 74 IKNELSRKIDINPYSLMTRKAWMYNIVYTMLLDGEGNSVVFPKYTTSGLIDELIPLAPSKVSFVDTDTGYQIWYQ----- 148 (403) T ss_pred cCChHHHHHhccCCcCCCHHHHHHHHHHHHhhcCCccEEEEEEEcCCCcEEEEEEEcCCeeEEEEcCCceEEEEe----- Confidence 788888888899999999999999999999984 7899999999999999999999999999988776554332 Q ss_pred CCCceeEEEeeeeeEEeec-CCCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHccCCcceeeeeCCcCCHHHHHHHHH Q lcl|Aclame:pro 159 GVGTQLVSFADDEVVPIRF-FNPDGLERGLSLMESLKSTIFSEDSSRNATAAMWKNAGRPNLVLRHEKRLSPEAQQRLRE 237 (518) Q Consensus 159 ~~~~~~~~~~~~~vih~~~-~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~p~gil~~~~~~~~e~~~~~~~ 237 (518) ...+++++||||+. +++.+.++|+||+..+...+....++++++.++|+||++|++|++++..+++++.+++++ T Consensus 149 -----~~~~~~~eiih~~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~p~~il~~~~~~~~~~~~~~~~ 223 (403) T protein:vir:80 149 -----GKAYNYDEVLHFIVNPDPEKPYMGRGYRVVLKDIVNNLKQATTTKKSFMSGKYMPSLIVKVDAATAELSSEEGRN 223 (403) T ss_pred -----ecccchhhEEEEeccCCCcCccccccHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEeCCCCChHHHHHHHH Confidence 13588999999995 456667789999999999999999999999999999999999999999999999999999 Q ss_pred HHHHHhcCccccccceeccCCc-cccccc-CChhhHHHHHHHHHHHHHHHHHhccchHhhccccccccccHHHHHHHHHH Q lcl|Aclame:pro 238 QFDRAHAGSSNTGKTMVVEEGM-EPIPLQ-LTAVEMQFIEARQLNREEVCGVYDIAPPIVHILDRATFSNISAQMRAFYR 315 (518) Q Consensus 238 ~~~~~~~g~~n~g~~~vl~~g~-~~~~~~-~~~~d~q~~e~~~~~~~~Ia~~fgVpp~~lg~~~~~~~s~~e~~~~~~~~ 315 (518) +|.+.+.+..|+|++++++++. ++..+. +++.|+||+|.+++++.+||++|||||++||..+ +.+++...|++ T Consensus 224 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~d~q~~e~~~~~~~~Ia~~fgVPp~~lg~~~-----~~~~~~~~f~~ 298 (403) T protein:vir:80 224 AVFKKYLEASEAGQPWIIPAELLDVEQVKPLSLKDLAIHETVELDKRTVAGIFGVPAFLLGVGK-----YDKDEYNNFIN 298 (403) T ss_pred HHHHHHhhhhhcCCeeeecccccccceeccCCHHHHHHHHHHHHhHHHHHHHhCCCHHHcCCCC-----ccHHHHHHHHH Confidence 9999999999999999997664 444443 5789999999999999999999999999998532 23556678999 Q ss_pred HHHHHHHHHHHHHHHhhhcchhhccceeeechhhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHHhCCCCCCccCceeee Q lcl|Aclame:pro 316 DTMAIPIARIQSAMDKYVGQYWVRKNRMKFDIDDVIQPDWEAKSESTQKMVNSGVATPNEGREIMGLPRSDDPKADELYA 395 (518) Q Consensus 316 ~~l~P~~~~ie~~ln~~l~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~T~NE~R~~~g~~pi~~~~gD~~~~ 395 (518) +||.|++.+||++||++|++. ..++++||.+.++++|.+++++.+.+++++|+||+||+|+++|+||++ |||++++ T Consensus 299 ~~l~P~~~~ie~~l~~kll~~--~~~~~~f~~~~ll~~d~~~~~~~~~~~~~~Gi~t~NE~R~~~gl~p~~--ggd~~~~ 374 (403) T protein:vir:80 299 STILPIAKGIEQELTRKLLIS--PDLYFKFNPRSLYAYDLKELAEVGSNMYVRGLMEGNEVRDWLGLSPKE--GLSELVI 374 (403) T ss_pred HHHHHHHHHHHHHHHHhccCC--CCcEEEeechhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCC--CCCeEee Confidence 999999999999999999875 347899999999999999999999999999999999999999999996 8999999 Q ss_pred cccccccccccccCCCCCCCCCCCCcccCCCCCccCC Q lcl|Aclame:pro 396 NSALQPLGATPDGAVEGEEAPAPKRPASTPVASLDQS 432 (518) Q Consensus 396 ~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 432 (518) ++|++|++..++.... +.++ ....+.+.+ T Consensus 375 ~~n~~pl~~~~~~~~~-----k~ge---~~~~~~~~~ 403 (403) T protein:vir:80 375 LENYIPLDKIGDQNKL-----KGGE---KGGADGQTD 403 (403) T ss_pred cccccchhhccchhhc-----cCCC---CCCCCCCCC Confidence 9999999865432210 0000 000000000 No 55 >protein:vir:9359 Length: 348 # NCBI annotation: head portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:166 # MgeName: phi 12 # Cross-refs: genbank:acc:NP_803337;genbank:gi:29028648;genbank:GeneID:1258089 Probab=100.00 E-value=2.2e-82 Score=468.30 Aligned_cols=346 Identities=18% Similarity=0.269 Sum_probs=303.1 Q ss_pred hccCceEEEEecCCceeeecchHHHHHhhccCccCCHHHHHHHHHHHHHHcCCeeEEeeeCCCCceeeeeeeCCcceEEE Q lcl|Aclame:pro 63 LARLPVKCMFTSGDTETEEHDTGYAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQKNKSGTPEKLMPMHPSRVAIK 142 (518) Q Consensus 63 ia~lp~~v~~~~~~~~~~~~~~~~~~l~~~PN~~~t~~~f~~~~~~~~ll~G~~~~~i~~~~~G~~~~l~~l~p~~v~~~ 142 (518) ||+||+++++++. ..+|+.+++|+.+||++||+++||+.++.+++++||+|++++++..|++++|+|++|++|++. T Consensus 1 ia~lp~~~~~~~~----~~~~~l~~lL~~~PN~~~t~~~f~~~~~~~l~l~Gna~~~i~r~~~G~~~~L~~l~~~~v~~~ 76 (348) T protein:vir:93 1 MASLPLKMYEDYK----VVNTEVSDLLTVSPNNSLSSFDFINQIETIRNEKGNAYVLIERDIYHQPSKLFLLNPDVVEML 76 (348) T ss_pred CcccceEeEecCc----CcccHHHHHHHhCCCCCCCHHHHHHHHHHHHhhcCCeEEEEEECCCCcEEEEEEEcCCceEEE Confidence 9999999998653 345666677778999999999999999999999999999999999999999999999999999 Q ss_pred eccCcceEEEEeeccCCCCceeEEEeeeeeEEeecCCCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHccCCcceeee Q lcl|Aclame:pro 143 RNSRTGRYEYYFQAGAGVGTQLVSFADDEVVPIRFFNPDGLERGLSLMESLKSTIFSEDSSRNATAAMWKNAGRPNLVLR 222 (518) Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~p~gil~ 222 (518) .+.+++.+.|.+... ++..+.|++++|||||++++.+.++|+||+..+..++....++++++ ++.++..++++++ T Consensus 77 ~~~~~~~~~y~~~~~---~g~~~~~~~~eiih~r~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~--~~~~~~~~~~i~~ 151 (348) T protein:vir:93 77 IENQSRELYYSIHAA---TGNKLIVHNMDMLHFKHIVASNMVQGISPIDVLKNTTDFDNAVRTFN--LTEMQKPDSFMLK 151 (348) T ss_pred EeCCCcEEEEEEEcC---CCeEEEEccccEEEecCCCCCCceeeccHHHHHHHHHHHHHHHHHHH--HHhcCCCceeEEe Confidence 988888888877543 34567899999999999888888899999999999999999998885 4444555678889 Q ss_pred eCCcCCHHHHHHHHHHHHHHhcCccccccceeccCCcccccccCChhhHHHHHHHHHHHHHHHHHhccchHhhccccccc Q lcl|Aclame:pro 223 HEKRLSPEAQQRLREQFDRAHAGSSNTGKTMVVEEGMEPIPLQLTAVEMQFIEARQLNREEVCGVYDIAPPIVHILDRAT 302 (518) Q Consensus 223 ~~~~~~~e~~~~~~~~~~~~~~g~~n~g~~~vl~~g~~~~~~~~~~~d~q~~e~~~~~~~~Ia~~fgVpp~~lg~~~~~~ 302 (518) .+..+++++++++++.|++.+. |+|+++++++|++|++++++++|+||+|++++++++||++|||||.+||..++++ T Consensus 152 ~~~~l~~e~~~~~~~~~~~~~~---n~~~~~vl~~g~~~~~l~~~~~d~q~~e~~~~~~~~Ia~~fgVP~~~lg~~~~~~ 228 (348) T protein:vir:93 152 YGSNVSTEKRQQVLEDFKQYYE---ENGGILFQEPGVEIEPLPKKYVSEDIVASENLTRERVANVFQLPSIFLNARSNTN 228 (348) T ss_pred cCCCCCHHHHHHHHHHHHHHhh---cCCCeeecCCCceEEEcCCChhHHHHHHHHHHHHHHHHHHhCCCHHHhCCCCCCC Confidence 9999999999999999999874 6789999999999999999999999999999999999999999999999998999 Q ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHhhhcchhhc--cceeeechhhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHH Q lcl|Aclame:pro 303 FSNISAQMRAFYRDTMAIPIARIQSAMDKYVGQYWVR--KNRMKFDIDDVIQPDWEAKSESTQKMVNSGVATPNEGREIM 380 (518) Q Consensus 303 ~s~~e~~~~~~~~~~l~P~~~~ie~~ln~~l~~~~~~--~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~T~NE~R~~~ 380 (518) ++|.|++.+.|+++||.|+++.|+++||++|++..++ +++++||.+.+++.|.+++++++++++++|++|+||+|+++ T Consensus 229 ~~~~e~~~~~~~~~~l~P~~~~ie~~l~~~l~~~~~~~~g~~i~fd~~~l~~~d~~~~a~~~~~~~~~G~~T~NE~R~~~ 308 (348) T protein:vir:93 229 FAKNEELNRFYLQHTLLPIVKQYEEEFNRKLLTKTDREKNRYFKFNVKSYLRADSATQAEVYFKAVRSGYYTINDIREWE 308 (348) T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCcccccCcceEEeechhhhccCHHHHHHHHHHHHhCCCCCHHHHHHHh Confidence 9999999999999999999999999999999987554 67899999999999999999999999999999999999999 Q ss_pred hCCCCCCccCceeeecccccccccccccCCCCCCCCCCCCcccCCCCCccCCcc Q lcl|Aclame:pro 381 GLPRSDDPKADELYANSALQPLGATPDGAVEGEEAPAPKRPASTPVASLDQSPP 434 (518) Q Consensus 381 g~~pi~~~~gD~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 434 (518) |++|++ |||++++++|++|++......... + .++.+.+.. T Consensus 309 g~~p~~--ggD~~~~~~n~~~~~~~~~~~~~~----~--------gg~~n~~~~ 348 (348) T protein:vir:93 309 DLPPVE--GGDKPLISGDLYPIDTPLELRKSL----K--------GGDKNVNES 348 (348) T ss_pred CCCCCC--CcCeEeecccccccccchhhcccc----c--------CCCCCcCCC Confidence 999996 899999999999987653322110 0 000000000 No 56 >protein:vir:63755 Length: 547 # NCBI annotation: gp14 # Family: family:all:2446 # MgeID: mge:1517 # MgeName: P100 # Cross-refs: genbank:gi:82547619;genbank:GeneID:3783506 Probab=100.00 E-value=2.5e-81 Score=462.44 Aligned_cols=463 Identities=10% Similarity=0.081 Sum_probs=316.0 Q ss_pred CCCCCC-----CCCccccccccchhhhhh-hc-cCccCCcccCc-cchhhHHHHhhhHHHHHHHHHHHHhhccC------ Q lcl|Aclame:pro 1 MLLANG-----QTLSAPAMAELSPQMQDS-YY-YAPAVGMQLER-QFSLYGGIYKNQPWVRTVIAKRAQALARL------ 66 (518) Q Consensus 1 ~~f~~~-----~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~-~~~~~~~~~~~~~~v~~~v~~ia~~ia~l------ 66 (518) -|+..+ ++......+..++.+... |. +....+...+. +.....+.|..+|+|++||++||+.||++ T Consensus 30 ~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~l~~l~~~~~~npiv~~~I~~~a~~ia~~~~~~~~ 109 (547) T protein:vir:63 30 AIQQREQEQISKAMNNKEVAYSQPVIGSMSANPGFKTKPSIRNNQDLHGVLKKFGGNIILNAIINTRSNQVSMYCKPARH 109 (547) T ss_pred hhhhhhHHHHHHhhcccchhhhchhhheeecccccccCCccCChhHHHHHHHHhhcCHHHHHHHHHHHHHHhhhhhhhhh Confidence 222221 222222222333333221 11 11111111111 11223456788999999999999999964 Q ss_pred -----ceEEEEecCCce----eeecchHHHHHhhccCccC-----CHHHHHHHHHHHHHHcCCeeEEeeeCCCCceeeee Q lcl|Aclame:pro 67 -----PVKCMFTSGDTE----TEEHDTGYAKLLADPCEYL-----DPFAFWEWVASTLDIYGETYLAIQKNKSGTPEKLM 132 (518) Q Consensus 67 -----p~~v~~~~~~~~----~~~~~~~~~~l~~~PN~~~-----t~~~f~~~~~~~~ll~G~~~~~i~~~~~G~~~~l~ 132 (518) +|.+.-++.+.. .....+.+..++.+||+++ |+.+|+++++.+++++||+|++++++.+|++++|| T Consensus 110 ~~~~~~~~ir~k~~~~~~~~~~~~~~~~l~~~l~~pn~~~~p~~~s~~~f~~~lv~d~ll~Gn~~~~i~rd~~G~~~~L~ 189 (547) T protein:vir:63 110 SEKGVGFEVRLKDLDKKPTSHDEATIKRIESFIEKTGVDNDINRDSFSSFVKKIVRDTYMYDQVNFEKVFNRNQSMVRFV 189 (547) T ss_pred hccCCCceeEecccccccChhhHHHHHHHHHHHHhhCCCCCCccchHHHHHHHHHHHHHhhCCEEEEEEECCCCcEEEEE Confidence 344432222211 1122345667888999874 88999999999999999999999999999999999 Q ss_pred eeCCcceEEEeccCcceE---EEEeeccCCCCceeEEEeeeeeEEeecCCCCc---ccccchHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 133 PMHPSRVAIKRNSRTGRY---EYYFQAGAGVGTQLVSFADDEVVPIRFFNPDG---LERGLSLMESLKSTIFSEDSSRNA 206 (518) Q Consensus 133 ~l~p~~v~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~vih~~~~~~~~---~~~G~s~~~~~~~~i~~~~~~~~~ 206 (518) ||+|.+|++..+.++... .+++.. ..++..+.|++++|||+++++..+ ..||+||+..+..+|..+.+++++ T Consensus 190 ~l~p~~V~~~~~~~g~~~~~~~~y~~~--~~~~~~~~~~~~eiih~r~n~~~~~~~~~~G~Spi~~~~~~i~~~~~a~~~ 267 (547) T protein:vir:63 190 AKDPTTIFFATTADGKIPDNGNRFVQV--IDQKIVATFNAREMAFAVRNPRSDIYATGYGYPELEIALKQFIAHENTEAF 267 (547) T ss_pred EecCceeEEEECCccccccCceEEEEE--cCCcEEEEeccccEEEecccCCCCcccccccccHHHHHHHHHHHHHHHHHH Confidence 999999999987766431 111222 224456789999999999876543 467999999999999999999999 Q ss_pred HHHHHHccCCcceeeeeCC--cCCHHHHHHHHHHHHHHhcCccccccceec-cCCcccccccCChhhHHHHHHHHHHHHH Q lcl|Aclame:pro 207 TAAMWKNAGRPNLVLRHEK--RLSPEAQQRLREQFDRAHAGSSNTGKTMVV-EEGMEPIPLQLTAVEMQFIEARQLNREE 283 (518) Q Consensus 207 ~~~~~~ng~~p~gil~~~~--~~~~e~~~~~~~~~~~~~~g~~n~g~~~vl-~~g~~~~~~~~~~~d~q~~e~~~~~~~~ 283 (518) +.++|+||++|+|||+++. .+++++++++++.|++.++|.+|+|+++|+ ++|++|+++++++.|+||+|++++++++ T Consensus 268 ~~~~f~Ng~~p~giL~~~~~~~ls~e~~~~lk~~~~~~~~G~~nagk~~vl~~~g~~~~~l~~~~~d~qfle~~~~~~~~ 347 (547) T protein:vir:63 268 NDRFFSHGGTTRGILQIKAAQQQSQHALEIFKREWKNSLSGINGSWQIPVVSAEDVKFVNMTPSARDMEFEKWLNYLINV 347 (547) T ss_pred HHHHHHcCCCcceEEEecCCCCCCHHHHHHHHHHHHHHhcCcccccccccccCCCceEEEcCCChhHHHHHHHHHHHHHH Confidence 9999999999999998864 489999999999999999999999998766 6789999999999999999999999999 Q ss_pred HHHHhccchHhhccccc----------cccccHHHHHHHHHHHHHHHHHHHHHHHHHhhhcchhhccceeeechhhhhcc Q lcl|Aclame:pro 284 VCGVYDIAPPIVHILDR----------ATFSNISAQMRAFYRDTMAIPIARIQSAMDKYVGQYWVRKNRMKFDIDDVIQP 353 (518) Q Consensus 284 Ia~~fgVpp~~lg~~~~----------~~~s~~e~~~~~~~~~~l~P~~~~ie~~ln~~l~~~~~~~~~~~fd~~~l~~~ 353 (518) ||++|||||++||+.+. .+++|++++...|+++||+||+.+||++||++|++.++..++++|+ .+... T Consensus 348 Ia~afgVPP~~lG~~~~~~~~~~~~~s~t~sn~e~~~~~~~~~tL~P~~~~ie~~ln~~L~~~~~~~~~~~f~--~~~~~ 425 (547) T protein:vir:63 348 ISALYGIDPAEINIPNNGGATGSKGGSLNEGNSAEKNQASKNKGLQPLLGFIEDFINKHIVAEFGDKYTFQFV--GGDIK 425 (547) T ss_pred HHHHhCCCHHHcCcccccccccccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCCceEEEee--ccccc Confidence 99999999999997543 3789999999999999999999999999999999876655555554 66667 Q ss_pred CHHHHHHHHHHHHhCCCcCHHHHHHHHhCCCCCCccCceeeecccccccccccccCCCCCC--CCCCCCcccCCCCCccC Q lcl|Aclame:pro 354 DWEAKSESTQKMVNSGVATPNEGREIMGLPRSDDPKADELYANSALQPLGATPDGAVEGEE--APAPKRPASTPVASLDQ 431 (518) Q Consensus 354 d~~~~~~~~~~~~~~g~~T~NE~R~~~g~~pi~~~~gD~~~~~~n~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~ 431 (518) +..+++++. +++.+|+||+||+|+++||+|.. ||||+++.+.++.+++........... ....+++.+.....++. T Consensus 426 ~~~~~~~~~-~~~~~g~lT~NE~R~~~gl~P~~-egGD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 503 (547) T protein:vir:63 426 SELESVKIL-AEKAKVAMTVNEVRKELNLPGDV-IGGDIPLNGVIVQRIGQLMQQEQFEHEKQQSNLQMLQEQTGNRVST 503 (547) T ss_pred cHHHHHHHH-HHHhCCCcCHHHHHHHhCCCCCC-CCCceeecccccccccccccccCCccccchhhccccccccCCCCCC Confidence 777766655 47788999999999999999842 599999999998887654322111100 00011111111111111 Q ss_pred Ccc------ccccccChhhhcchhHHHHHHHHHHhhccCcchhHH Q lcl|Aclame:pro 432 SPP------ASVPGLSPTNSDRSTDSGKTEPRRLMQKPPPKESSP 470 (518) Q Consensus 432 ~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~ 470 (518) +++ +.....+.+.+.++. .+....+........+|++. T Consensus 504 ~~~~~~~~~~~~~~~~~d~~~~~~-~~~~~~~~~~~~~~~~~~~~ 547 (547) T protein:vir:63 504 DVEDIPDGKDTTGDIGKDGQRKDK-DNANAGKQGMKGDKPNDWQT 547 (547) T ss_pred CCCCCCCCcccCCCcCccccccCc-cccchhhhhcCCCCccccCC Confidence 110 011111111111100 00111111111111122222 No 57 >protein:vir:7407 Length: 392 # NCBI annotation: putative portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:146 # MgeName: P335 # Cross-refs: genbank:acc:NP_839924;genbank:gi:30089894;genbank:GeneID:1260681 Probab=100.00 E-value=2.1e-81 Score=462.88 Aligned_cols=388 Identities=14% Similarity=0.151 Sum_probs=308.8 Q ss_pred CCCCCC----CCCccccccccchhhhhhhccCccCCcccCccchhhHHHHhhhHHHHHHHHHHHHhhccCceEEEEecCC Q lcl|Aclame:pro 1 MLLANG----QTLSAPAMAELSPQMQDSYYYAPAVGMQLERQFSLYGGIYKNQPWVRTVIAKRAQALARLPVKCMFTSGD 76 (518) Q Consensus 1 ~~f~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~v~~ia~~ia~lp~~v~~~~~~ 76 (518) ||+|-. +...++.....+.++...................++...++++++|++||++||++||++|++++++.. T Consensus 1 m~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~al~~~~v~~~v~~ia~~ia~lp~~~~~~~~- 79 (392) T protein:vir:74 1 MILPILNFINQTNDPPEAGSVQSYFPDGNDAQIMESLLGDNNEWVSARAALRNSDLFSIILQLSSDLAIVKINAEKKKN- 79 (392) T ss_pred CcchhhhhhhcccCcccccccccccccCchhhhhhhccCCCCcccchhhhhcchHHHHHHHHHHHhhccCceeeccchh- Confidence 555431 111222222222332211100000000111223455677899999999999999999999999987543 Q ss_pred ceeeecchHHHHHhhccCccCCHHHHHHHHHHHHHHcCCeeEEeeeCCCCceeeeeeeCCcceEEEeccCcceEEEEeec Q lcl|Aclame:pro 77 TETEEHDTGYAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQKNKSGTPEKLMPMHPSRVAIKRNSRTGRYEYYFQA 156 (518) Q Consensus 77 ~~~~~~~~~~~~l~~~PN~~~t~~~f~~~~~~~~ll~G~~~~~i~~~~~G~~~~l~~l~p~~v~~~~~~~~~~~~~~~~~ 156 (518) ..|+.+||++||+++||+.++.+++++||+|++++++.+|++++|+|++|++|++..+.+++.+.|.+.. T Consensus 80 ----------~~l~~~PN~~~t~~~f~~~~~~~lll~Gna~~~i~r~~~G~~~~L~~i~~~~v~v~~~~~~~~~~y~~~~ 149 (392) T protein:vir:74 80 ----------QGIIDNPSTNANKHGFWQSMFAQLLLGGEAFAYRWRNANGADMKWEYLRPSQVNTYYFEYENGMYYNITF 149 (392) T ss_pred ----------hhhhhhcCCCCCHHHHHHHHHHHhhhcCCEEEEEEECCCCcEEEEEEEcCceeEEEEcCCCceEEEEEEe Confidence 3588999999999999999999999999999999999999999999999999999999999999999988 Q ss_pred cCCCCceeEEEeeeeeEEeecCCCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHccCCcceeeeeCCcCCHHHHHHHH Q lcl|Aclame:pro 157 GAGVGTQLVSFADDEVVPIRFFNPDGLERGLSLMESLKSTIFSEDSSRNATAAMWKNAGRPNLVLRHEKRLSPEAQQRLR 236 (518) Q Consensus 157 ~~~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~p~gil~~~~~~~~e~~~~~~ 236 (518) .+...+..+.+++++||||+++++++..+|+||+..+..+|..+.++++++.++|+||++|+|+|++++....++ +.+ T Consensus 150 ~~~~~~~~~~~~~~evih~~~~~~~~~~~G~s~i~~~~~~i~~~~~~~~~~~~~f~ng~~p~~il~~~~~~~~~~--~~~ 227 (392) T protein:vir:74 150 DDPKIEPILQAPQSDLIHMKLLSIDGGKTGISPLYSLRRESKIQRASDRLTISSLNSSLNVPGVLTVKGGGLLSD--KDK 227 (392) T ss_pred cCCccceeEEEcCccEEEecCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEeCCCCCchH--HHH Confidence 777777788999999999999999998899999999999999999999999999999999999999988655443 345 Q ss_pred HHHHHHhcCccccccceeccCCcccccccCChhhHHHHHHHHHHHHHHHHHhccchHhhccccccccccHHHHHHHHHHH Q lcl|Aclame:pro 237 EQFDRAHAGSSNTGKTMVVEEGMEPIPLQLTAVEMQFIEARQLNREEVCGVYDIAPPIVHILDRATFSNISAQMRAFYRD 316 (518) Q Consensus 237 ~~~~~~~~g~~n~g~~~vl~~g~~~~~~~~~~~d~q~~e~~~~~~~~Ia~~fgVpp~~lg~~~~~~~s~~e~~~~~~~~~ 316 (518) +.|.+.+.|..|+|+++|+++|++|++++++++|+||+|++++++++||++|||||+++|+.+..+ +.+++.++|+++ T Consensus 228 ~~~~~~~~~~~n~g~~~vl~~g~~~~~l~~~~~d~q~~e~~~~~~~~Ia~~fgVPp~~lg~~~~~~--~~~e~~~~~~~~ 305 (392) T protein:vir:74 228 ASRSRSFMKRSRSGGPVVLDDLEEFTALEIKSNVAQLLSQTDWTSKQYAKVYGLPDSYIGGQGDQQ--SSIQQISGMYAS 305 (392) T ss_pred HHHHHHHhccccCCCeeecCCCceEEEccCChhHHHHHHHHHHHHHHHHHHhCCCHHHhCCCCCcc--cHHHHHHHHHHH Confidence 778888889999999999999999999999999999999999999999999999999999865433 456778999999 Q ss_pred HHHHHHHHHHHHHHhhhcchhhccceeeechhhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHHhCCCCCCccCceeeec Q lcl|Aclame:pro 317 TMAIPIARIQSAMDKYVGQYWVRKNRMKFDIDDVIQPDWEAKSESTQKMVNSGVATPNEGREIMGLPRSDDPKADELYAN 396 (518) Q Consensus 317 ~l~P~~~~ie~~ln~~l~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~T~NE~R~~~g~~pi~~~~gD~~~~~ 396 (518) +|.|+++.|+++|+++|++. ++||...+++.|.++++..+..++++|++|+||+|+++....+. | ++.... T Consensus 306 ~l~p~~~~ie~~l~~~l~~~------~~~~~~~~~~~d~~~~~~~~~~l~~~g~~t~near~~~~~~g~~-p--ne~r~~ 376 (392) T protein:vir:74 306 ALNRYLRPAISELEYKLSDH------ISVNMRPAIDPLGDNYLSTISTATRWGALAENQATFVLQEAGYI-P--KDLPAP 376 (392) T ss_pred HHHHHHHHHHHHHHHhccch------hcccchhhhcCCHHHHHHHHHHHHhCCCcCHHHHHHHHHhCCCC-c--cccchh Confidence 99999999999999999864 57888889999999999999999999999999999998433322 1 122222 Q ss_pred ccccccccccccCCCCCCCC Q lcl|Aclame:pro 397 SALQPLGATPDGAVEGEEAP 416 (518) Q Consensus 397 ~n~~~~~~~~~~~~~~~~~~ 416 (518) .|+.|+. .|+ .+++.| T Consensus 377 enl~~~~---~Gd-~~~p~p 392 (392) T protein:vir:74 377 ENTNKKT---TGQ-SNEPVP 392 (392) T ss_pred cCCCCCC---CCC-CCCCCC Confidence 2322211 111 111111 No 58 >protein:vir:100691 Length: 535 # NCBI annotation: hypothetical protein # Family: family:all:2446 # MgeID: mge:1633 # MgeName: LP65 # Cross-refs: genbank:acc:YP_164747;genbank:gi:56693160;genbank:GeneID:3197324 Probab=100.00 E-value=2.8e-80 Score=456.73 Aligned_cols=448 Identities=13% Similarity=0.126 Sum_probs=302.7 Q ss_pred CCCCCC----------------------CCCc----------------------cccccccchhhhhhhccCccCCcccC Q lcl|Aclame:pro 1 MLLANG----------------------QTLS----------------------APAMAELSPQMQDSYYYAPAVGMQLE 36 (518) Q Consensus 1 ~~f~~~----------------------~~~~----------------------~~~~~~~~~~~~~~~~~~~~~~~~~~ 36 (518) -||-+| .++. ........ .+...|...+. T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~l~~~~~~~~~------ 84 (535) T protein:vir:10 12 SLSNKKSTSYIELGDYDKDIVNKAIRPGRASARDTVDGIDIADGNVAGQYSVASISDVLSTK-KLLKAYADNDI------ 84 (535) T ss_pred HhhhhhhhhhHHHhhhhHHHHHhhhhhhhhhhhccccccccccCCcccccccCccccccCHH-HHHHHhccChh------ Confidence 111111 1111 00000000 01111111110 Q ss_pred ccchhhHHHHhhhHHHHHHHHHHHHhhccCceEEEEecCCc--eeeec-chHHHHHhhccCccCCHHH----HHHHHHHH Q lcl|Aclame:pro 37 RQFSLYGGIYKNQPWVRTVIAKRAQALARLPVKCMFTSGDT--ETEEH-DTGYAKLLADPCEYLDPFA----FWEWVAST 109 (518) Q Consensus 37 ~~~~~~~~~~~~~~~v~~~v~~ia~~ia~lp~~v~~~~~~~--~~~~~-~~~~~~l~~~PN~~~t~~~----f~~~~~~~ 109 (518) ......++.++.++++||.++++.++++|+++++.+..+ ..... |+...+|+.+||++|++++ |+++++.+ T Consensus 85 --~~~~i~t~~~~va~~~~i~~~s~~~~~~~i~l~~~~~~~~~~~~~~~~~l~~lL~~~PN~~~~~~~~~~~~~~~lv~d 162 (535) T protein:vir:10 85 --VQAIIRTRTNQVLTYSNPSRYNRNGVGFKVELKDATKVMSKAQIKRAHEIEDFIYNTGSEYYEWRDTFPRLLTKIIND 162 (535) T ss_pred --HHHHHHHHHHHHHHHHHHHHHhcccCcceeEEEeccCCCcchhhhhhhHHHHHHHhCCCCCCChhHHHHHHHHHHHHH Confidence 011234555677788888888888899999999775443 22334 4445667789999998875 55667777 Q ss_pred HHHc-CCeeEEeeeCCCCceeeeeeeCCcceEEEeccCcc---eEEEEeeccCCCCceeEEEeeeeeEEeecCCCCc--- Q lcl|Aclame:pro 110 LDIY-GETYLAIQKNKSGTPEKLMPMHPSRVAIKRNSRTG---RYEYYFQAGAGVGTQLVSFADDEVVPIRFFNPDG--- 182 (518) Q Consensus 110 ~ll~-G~~~~~i~~~~~G~~~~l~~l~p~~v~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~vih~~~~~~~~--- 182 (518) ++++ |++|++|+++..|++++|||++|.+|++..+.++. ..+|.+. .++..+.|++++||||++++..+ T Consensus 163 ~l~~~g~ay~~i~r~~~G~~~~L~~l~p~~V~v~~d~~~~~~~~~~~~~~----~~~~~~~~~~~eiih~~~~~~~~~~~ 238 (535) T protein:vir:10 163 MYVQDQINIERIFKNDSNELDHFNAVDASKVVISYSPRSKDQPRKFEQFV----SETKSVKFSERNLTFINYWNLSDTDR 238 (535) T ss_pred HHhhCCceEEEEEECCCCcEEEEEEeCCceeEEEEcCccccCceEEEEEe----cCceeEEECcccEEEEeccCCCCccc Confidence 6665 57899999999999999999999999998876553 3444332 23456789999999999876543 Q ss_pred ccccchHHHHHHHHHHHHHHHHHHHHHHHHccCCcceeeeeCC----cCCHHHHHHHHHHHHHHhcCccccccceecc-C Q lcl|Aclame:pro 183 LERGLSLMESLKSTIFSEDSSRNATAAMWKNAGRPNLVLRHEK----RLSPEAQQRLREQFDRAHAGSSNTGKTMVVE-E 257 (518) Q Consensus 183 ~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~p~gil~~~~----~~~~e~~~~~~~~~~~~~~g~~n~g~~~vl~-~ 257 (518) ..||+||+..+..+|..+.++++|+.++|+||++|+|||+++. .+++++++++++.|++.++|.+|+|+++|+. + T Consensus 239 ~~~G~Spi~~~~~~i~~~~aa~~~~~~~f~ng~~p~giL~~~~~~~~~ls~e~~e~lk~~~~~~~~G~~nag~~~vl~~~ 318 (535) T protein:vir:10 239 RGYGYSPVEASIPLIRAIYDTEQFNARFFSQGGTTRGILVIDQDGDAQANQMMLAGIRRQWTSQGSGLGGAWKIPILAAK 318 (535) T ss_pred ccccccHHHHHHHHHHHHHHHHHHHHHHHhccCCccEEEEecCCCCcccCHHHHHHHHHHHHHHhcCcccccccccccCC Confidence 4679999999999999999999999999999999999999975 3789999999999999999999999988776 6 Q ss_pred CcccccccCChhhHHHHHHHHHHHHHHHHHhccchHhhcccccccccc------------HHHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 258 GMEPIPLQLTAVEMQFIEARQLNREEVCGVYDIAPPIVHILDRATFSN------------ISAQMRAFYRDTMAIPIARI 325 (518) Q Consensus 258 g~~~~~~~~~~~d~q~~e~~~~~~~~Ia~~fgVpp~~lg~~~~~~~s~------------~e~~~~~~~~~~l~P~~~~i 325 (518) |++|+++++++.|+||+|++++++++||++|||||++||+.++++|+| .|++...|+++||.||+.+| T Consensus 319 g~~~~~l~~~~~D~qfle~~~~~~~eIa~afgVPp~~lG~~~~at~sn~~~~~~~~~~s~~E~~~~~~~~~~L~P~l~~i 398 (535) T protein:vir:10 319 DAKFVNMTQNSRDMEFDKFLNFMIYDTAAIFQMQPEEINFPNNGGSTGKSGTKSVNEGSTAKAKLESSKDKGLTPLLSFI 398 (535) T ss_pred CceEEecCCChhHHHHHHHHHHHHHHHHHHhCCCHHHhccccCcccccchhhhhhhhhhhHHHHHHHHHHHHHHHHHHHH Confidence 999999999999999999999999999999999999999988877754 46777789999999999999 Q ss_pred HHHHHhhhcchhhccceeeechhhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHHhCCCCCCccCceeeecccccccccc Q lcl|Aclame:pro 326 QSAMDKYVGQYWVRKNRMKFDIDDVIQPDWEAKSESTQKMVNSGVATPNEGREIMGLPRSDDPKADELYANSALQPLGAT 405 (518) Q Consensus 326 e~~ln~~l~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~T~NE~R~~~g~~pi~~~~gD~~~~~~n~~~~~~~ 405 (518) |++||++|++..+.. ++|+++.+++.|.++++++++.++ +|+||+||+|+++||||++ |||++++......+ T Consensus 399 e~~ln~~Ll~~~~~~--~~f~f~~l~~~d~~~r~~~~~~~~-~g~lT~NE~R~~~gl~pie--gGD~~~~~~~~~~~--- 470 (535) T protein:vir:10 399 EQVINDKIMRYVDTD--YRFSFTLGDAQDKLQEEQVWKLKL-ANGYFINEYRKDHGLKTVD--GLDVPGFIGSAENF--- 470 (535) T ss_pred HHHHhhhcccccCCe--EEEEeccccccCHHHHHHHHHHHH-cCCCCHHHHHHHhCCCCCC--Cccccccccchhhc--- Confidence 999999999876554 566777899999999999887655 6789999999999999996 89986653321111 Q ss_pred cccCCCCC-CCCCCCCcccCCCCCccCCccccccccChhhhcchhHHHHHHHHHHhhccCcchhHHHHHHHHH Q lcl|Aclame:pro 406 PDGAVEGE-EAPAPKRPASTPVASLDQSPPASVPGLSPTNSDRSTDSGKTEPRRLMQKPPPKESSPKHLRAVK 477 (518) Q Consensus 406 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~ 477 (518) ...+..++ ..+.+.++...+..+.+..+.. ......+.++.+++....||..++---......+ T Consensus 471 ~~~~~~~~~~~p~~~~~~~~~~~~~~~q~~~--------~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 535 (535) T protein:vir:10 471 INATGFGQPNVPDSSDDSGSTLGERERQERI--------QHSKDYEKGKDDPKSPLPKPSESDDVSNNEDADT 535 (535) T ss_pred ccccccccccCCCCCCCccccCCccccCccc--------ccccccccCCCCCCCCCCcCCCCCccccccccCC Confidence 11100000 0011111111110000000000 0000011111111111111111110000000000 No 59 >protein:vir:1023 Length: 392 # NCBI annotation: portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:20 # MgeName: bIL286 # Cross-refs: genbank:acc:NP_076677;genbank:gi:13095786;genbank:GeneID:920364 Probab=100.00 E-value=6.8e-80 Score=454.62 Aligned_cols=385 Identities=14% Similarity=0.159 Sum_probs=306.7 Q ss_pred CCCCCC----CCCccccccccchhhhhhhccCccCCcccCccchhhHHHHhhhHHHHHHHHHHHHhhccCceEEEEecCC Q lcl|Aclame:pro 1 MLLANG----QTLSAPAMAELSPQMQDSYYYAPAVGMQLERQFSLYGGIYKNQPWVRTVIAKRAQALARLPVKCMFTSGD 76 (518) Q Consensus 1 ~~f~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~v~~ia~~ia~lp~~v~~~~~~ 76 (518) ||||-- +...++.......++...................++...++++++|++||++||++||++|++++++.. T Consensus 1 m~m~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~al~~~~v~~~i~~ia~~ia~lp~~~~~~~~- 79 (392) T protein:vir:10 1 MILPILNFINQTNDPPEVGSVQSYFPDGNDAQIMESLLGDNNEWVSARAALRNSDLFSIILQLSSDLAIVKINAEKKKN- 79 (392) T ss_pred CcchhhhhhhcccccccccccccccccCchhhhhhhhcCCCCceechHHhhccHHHHHHHHHHHHhhccCceeeccchh- Confidence 665542 112222222222222211000000000001122345577889999999999999999999999986542 Q ss_pred ceeeecchHHHHHhhccCccCCHHHHHHHHHHHHHHcCCeeEEeeeCCCCceeeeeeeCCcceEEEeccCcceEEEEeec Q lcl|Aclame:pro 77 TETEEHDTGYAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQKNKSGTPEKLMPMHPSRVAIKRNSRTGRYEYYFQA 156 (518) Q Consensus 77 ~~~~~~~~~~~~l~~~PN~~~t~~~f~~~~~~~~ll~G~~~~~i~~~~~G~~~~l~~l~p~~v~~~~~~~~~~~~~~~~~ 156 (518) ..|+.+||++||+++||+.++.+++++||+|++++++.+|++++|+|++|.+|++..+.+++.+.|.+.. T Consensus 80 ----------~~l~~~PN~~~t~~~f~~~~~~~lll~Gna~~~i~r~~~g~~~~L~~l~~~~v~~~~~~~~~~~~y~~~~ 149 (392) T protein:vir:10 80 ----------QGIIDNPSTNANKHGFWQSMFAQLLLGGEAFAYRWRNANGADMKWEYLRPSQVNTYYFEYENGMYYNITF 149 (392) T ss_pred ----------hhHhhcCCCCCCHHHHHHHHHHHhhhcCcEEEEEEECCCCcEEEEEEEcCceeEEEEcCCCceEEEEEEe Confidence 3588999999999999999999999999999999999999999999999999999999999999999988 Q ss_pred cCCCCceeEEEeeeeeEEeecCCCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHccCCcceeeeeCCcCCHHHHHHHH Q lcl|Aclame:pro 157 GAGVGTQLVSFADDEVVPIRFFNPDGLERGLSLMESLKSTIFSEDSSRNATAAMWKNAGRPNLVLRHEKRLSPEAQQRLR 236 (518) Q Consensus 157 ~~~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~p~gil~~~~~~~~e~~~~~~ 236 (518) .+..++..+.|++++|||++++++++..+|+||+..+..+|....++++++.++|+||++|+|+|++++....++ +.+ T Consensus 150 ~~~~~~~~~~~~~~eiih~~~~~~~~~~~G~s~i~~~~~~i~~~~~~~~~~~~~f~ng~~p~gil~~~~~~~~~~--~~~ 227 (392) T protein:vir:10 150 DDPKIEPILQAPQSDLIHMKLLSIDGGKTGISPLYSLRRESKIQRASDRLTISSLNSSLNVPGVLTVKGGGLLSD--KDK 227 (392) T ss_pred cCcccceeEEEccccEEEecCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEeCCCCCchH--HHH Confidence 877777888999999999999999998899999999999999999999999999999999999999987654442 335 Q ss_pred HHHHHHhcCccccccceeccCCcccccccCChhhHHHHHHHHHHHHHHHHHhccchHhhccccccccccHHHHHHHHHHH Q lcl|Aclame:pro 237 EQFDRAHAGSSNTGKTMVVEEGMEPIPLQLTAVEMQFIEARQLNREEVCGVYDIAPPIVHILDRATFSNISAQMRAFYRD 316 (518) Q Consensus 237 ~~~~~~~~g~~n~g~~~vl~~g~~~~~~~~~~~d~q~~e~~~~~~~~Ia~~fgVpp~~lg~~~~~~~s~~e~~~~~~~~~ 316 (518) +.|.+.+.|..|+|+++|+++|++|++++.++.|+||+|++++++++||++|||||++||+.+.. ++.+++.++|+++ T Consensus 228 ~~~~~~~~~~~~~g~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgVpp~~lg~~~~~--~~~~~~~~~f~~~ 305 (392) T protein:vir:10 228 ASRSRSFMKRSRSGGPVVLDDLEEFTALEIKSNVAQLLSQTDWTSKQYAKVYGLPDSYIGGQGDQ--QSSIQQISGMYAS 305 (392) T ss_pred HHHHHHHhccccCCCeeecCCCceEEEccCChhHHHHHHHHHHHHHHHHHHhCCCHHHhCCCCCc--ccHHHHHHHHHHH Confidence 67778888889999999999999999999999999999999999999999999999999975533 3556778999999 Q ss_pred HHHHHHHHHHHHHHhhhcchhhccceeeechhhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHH---hCCCCCCccCcee Q lcl|Aclame:pro 317 TMAIPIARIQSAMDKYVGQYWVRKNRMKFDIDDVIQPDWEAKSESTQKMVNSGVATPNEGREIM---GLPRSDDPKADEL 393 (518) Q Consensus 317 ~l~P~~~~ie~~ln~~l~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~T~NE~R~~~---g~~pi~~~~gD~~ 393 (518) ||.|+++.|+++||++|++. ++||...+.+.|..+++..+.+++++|++|+||+|+++ |+.|.+ . T Consensus 306 ~l~P~~~~ie~~l~~~L~~~------~~~d~~~~~~~d~~~~~~~~~~l~~~g~~t~nE~r~~l~~~g~~p~e------~ 373 (392) T protein:vir:10 306 ALNRYLRPAISELEYKLSDH------ISVNMRPAIDPLGDNYLSTISTATRWGALAENQATFVLQEAGYIPKD------L 373 (392) T ss_pred HHHHHHHHHHHHHHHhcccc------ccccchhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHHHhcCCCccc------c Confidence 99999999999999999864 56888888899999999999999999999999999988 555422 1 Q ss_pred eecccccccccccccCCCCCCCC Q lcl|Aclame:pro 394 YANSALQPLGATPDGAVEGEEAP 416 (518) Q Consensus 394 ~~~~n~~~~~~~~~~~~~~~~~~ 416 (518) ....|+-|+. .| ..+++.| T Consensus 374 r~~e~l~~~~---~G-d~~~p~p 392 (392) T protein:vir:10 374 PAPENTNKKT---TG-QSNEPVP 392 (392) T ss_pred chhcCCCCCC---CC-CCCCCCC Confidence 1111221211 11 1111111 No 60 >protein:vir:3989 Length: 392 # NCBI annotation: putative portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:319 # MgeName: BK5-T # Cross-refs: genbank:acc:NP_116497;genbank:gi:14251130;genbank:GeneID:921299 Probab=100.00 E-value=6.8e-80 Score=454.62 Aligned_cols=385 Identities=14% Similarity=0.159 Sum_probs=306.7 Q ss_pred CCCCCC----CCCccccccccchhhhhhhccCccCCcccCccchhhHHHHhhhHHHHHHHHHHHHhhccCceEEEEecCC Q lcl|Aclame:pro 1 MLLANG----QTLSAPAMAELSPQMQDSYYYAPAVGMQLERQFSLYGGIYKNQPWVRTVIAKRAQALARLPVKCMFTSGD 76 (518) Q Consensus 1 ~~f~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~v~~ia~~ia~lp~~v~~~~~~ 76 (518) ||||-- +...++.......++...................++...++++++|++||++||++||++|++++++.. T Consensus 1 m~m~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~al~~~~v~~~i~~ia~~ia~lp~~~~~~~~- 79 (392) T protein:vir:39 1 MILPILNFINQTNDPPEVGSVQSYFPDGNDAQIMESLLGDNNEWVSARAALRNSDLFSIILQLSSDLAIVKINAEKKKN- 79 (392) T ss_pred CcchhhhhhhcccccccccccccccccCchhhhhhhhcCCCCceechHHhhccHHHHHHHHHHHHhhccCceeeccchh- Confidence 665542 112222222222222211000000000001122345577889999999999999999999999986542 Q ss_pred ceeeecchHHHHHhhccCccCCHHHHHHHHHHHHHHcCCeeEEeeeCCCCceeeeeeeCCcceEEEeccCcceEEEEeec Q lcl|Aclame:pro 77 TETEEHDTGYAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQKNKSGTPEKLMPMHPSRVAIKRNSRTGRYEYYFQA 156 (518) Q Consensus 77 ~~~~~~~~~~~~l~~~PN~~~t~~~f~~~~~~~~ll~G~~~~~i~~~~~G~~~~l~~l~p~~v~~~~~~~~~~~~~~~~~ 156 (518) ..|+.+||++||+++||+.++.+++++||+|++++++.+|++++|+|++|.+|++..+.+++.+.|.+.. T Consensus 80 ----------~~l~~~PN~~~t~~~f~~~~~~~lll~Gna~~~i~r~~~g~~~~L~~l~~~~v~~~~~~~~~~~~y~~~~ 149 (392) T protein:vir:39 80 ----------QGIIDNPSTNANKHGFWQSMFAQLLLGGEAFAYRWRNANGADMKWEYLRPSQVNTYYFEYENGMYYNITF 149 (392) T ss_pred ----------hhHhhcCCCCCCHHHHHHHHHHHhhhcCcEEEEEEECCCCcEEEEEEEcCceeEEEEcCCCceEEEEEEe Confidence 3588999999999999999999999999999999999999999999999999999999999999999988 Q ss_pred cCCCCceeEEEeeeeeEEeecCCCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHccCCcceeeeeCCcCCHHHHHHHH Q lcl|Aclame:pro 157 GAGVGTQLVSFADDEVVPIRFFNPDGLERGLSLMESLKSTIFSEDSSRNATAAMWKNAGRPNLVLRHEKRLSPEAQQRLR 236 (518) Q Consensus 157 ~~~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~p~gil~~~~~~~~e~~~~~~ 236 (518) .+..++..+.|++++|||++++++++..+|+||+..+..+|....++++++.++|+||++|+|+|++++....++ +.+ T Consensus 150 ~~~~~~~~~~~~~~eiih~~~~~~~~~~~G~s~i~~~~~~i~~~~~~~~~~~~~f~ng~~p~gil~~~~~~~~~~--~~~ 227 (392) T protein:vir:39 150 DDPKIEPILQAPQSDLIHMKLLSIDGGKTGISPLYSLRRESKIQRASDRLTISSLNSSLNVPGVLTVKGGGLLSD--KDK 227 (392) T ss_pred cCcccceeEEEccccEEEecCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEeCCCCCchH--HHH Confidence 877777888999999999999999998899999999999999999999999999999999999999987654442 335 Q ss_pred HHHHHHhcCccccccceeccCCcccccccCChhhHHHHHHHHHHHHHHHHHhccchHhhccccccccccHHHHHHHHHHH Q lcl|Aclame:pro 237 EQFDRAHAGSSNTGKTMVVEEGMEPIPLQLTAVEMQFIEARQLNREEVCGVYDIAPPIVHILDRATFSNISAQMRAFYRD 316 (518) Q Consensus 237 ~~~~~~~~g~~n~g~~~vl~~g~~~~~~~~~~~d~q~~e~~~~~~~~Ia~~fgVpp~~lg~~~~~~~s~~e~~~~~~~~~ 316 (518) +.|.+.+.|..|+|+++|+++|++|++++.++.|+||+|++++++++||++|||||++||+.+.. ++.+++.++|+++ T Consensus 228 ~~~~~~~~~~~~~g~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgVpp~~lg~~~~~--~~~~~~~~~f~~~ 305 (392) T protein:vir:39 228 ASRSRSFMKRSRSGGPVVLDDLEEFTALEIKSNVAQLLSQTDWTSKQYAKVYGLPDSYIGGQGDQ--QSSIQQISGMYAS 305 (392) T ss_pred HHHHHHHhccccCCCeeecCCCceEEEccCChhHHHHHHHHHHHHHHHHHHhCCCHHHhCCCCCc--ccHHHHHHHHHHH Confidence 67778888889999999999999999999999999999999999999999999999999975533 3556778999999 Q ss_pred HHHHHHHHHHHHHHhhhcchhhccceeeechhhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHH---hCCCCCCccCcee Q lcl|Aclame:pro 317 TMAIPIARIQSAMDKYVGQYWVRKNRMKFDIDDVIQPDWEAKSESTQKMVNSGVATPNEGREIM---GLPRSDDPKADEL 393 (518) Q Consensus 317 ~l~P~~~~ie~~ln~~l~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~T~NE~R~~~---g~~pi~~~~gD~~ 393 (518) ||.|+++.|+++||++|++. ++||...+.+.|..+++..+.+++++|++|+||+|+++ |+.|.+ . T Consensus 306 ~l~P~~~~ie~~l~~~L~~~------~~~d~~~~~~~d~~~~~~~~~~l~~~g~~t~nE~r~~l~~~g~~p~e------~ 373 (392) T protein:vir:39 306 ALNRYLRPAISELEYKLSDH------ISVNMRPAIDPLGDNYLSTISTATRWGALAENQATFVLQEAGYIPKD------L 373 (392) T ss_pred HHHHHHHHHHHHHHHhcccc------ccccchhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHHHhcCCCccc------c Confidence 99999999999999999864 56888888899999999999999999999999999988 555422 1 Q ss_pred eecccccccccccccCCCCCCCC Q lcl|Aclame:pro 394 YANSALQPLGATPDGAVEGEEAP 416 (518) Q Consensus 394 ~~~~n~~~~~~~~~~~~~~~~~~ 416 (518) ....|+-|+. .| ..+++.| T Consensus 374 r~~e~l~~~~---~G-d~~~p~p 392 (392) T protein:vir:39 374 PAPENTNKKT---TG-QSNEPVP 392 (392) T ss_pred chhcCCCCCC---CC-CCCCCCC Confidence 1111221211 11 1111111 No 61 >protein:vir:6210 Length: 394 # NCBI annotation: Portal protein # Family: family:all:10882 # MgeID: mge:128 # MgeName: phBC6A52 # Cross-refs: genbank:acc:NP_852590;genbank:gi:31415850;genbank:GeneID:1489208 Probab=100.00 E-value=8.5e-80 Score=454.06 Aligned_cols=388 Identities=12% Similarity=0.136 Sum_probs=300.8 Q ss_pred CC-CCCCCCCccccccccchhhhhhhccCccCCcccCccchhhHHHHhhhHHHHHHHHHHHHhhccCceEEEEecCCcee Q lcl|Aclame:pro 1 ML-LANGQTLSAPAMAELSPQMQDSYYYAPAVGMQLERQFSLYGGIYKNQPWVRTVIAKRAQALARLPVKCMFTSGDTET 79 (518) Q Consensus 1 ~~-f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~v~~ia~~ia~lp~~v~~~~~~~~~ 79 (518) |= |.+-..... .......|+.+.+++.... ....++.+.++++++|++||++||++||+|||+|++++++ T Consensus 1 MGl~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-----~~~~vt~~~al~~~~v~~~i~~Ia~~iA~lp~~v~~~~g~--- 71 (394) T protein:vir:62 1 MGLRDRFSNYLF-KKAEKRGYLDNVLGKSIRY-----SGVYVTDSNILQSSDVYELLQDISNQMVLADIVVEDEFGN--- 71 (394) T ss_pred Cchhhhhhhhcc-CCCCchhhhhhhhhccccc-----CccccChhhhhccHHHHHHHHHHHHhhcccceEEEcCCCc--- Confidence 31 111000000 1112233555544443211 1122445677899999999999999999999999976543 Q ss_pred eecchHHHHHhhccCccCCHHHHHHHHHHHHHHcCCeeEEeeeCCCCceeeeeeeCCcceEEEeccCcceEEEEeeccCC Q lcl|Aclame:pro 80 EEHDTGYAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQKNKSGTPEKLMPMHPSRVAIKRNSRTGRYEYYFQAGAG 159 (518) Q Consensus 80 ~~~~~~~~~l~~~PN~~~t~~~f~~~~~~~~ll~G~~~~~i~~~~~G~~~~l~~l~p~~v~~~~~~~~~~~~~~~~~~~~ 159 (518) +..+|+++.|+.+||++||+++||+.++.+++++||+|+++.++..+ + +..+.+..+..+ . +.+... T Consensus 72 ~~~~~~~~~Ll~~PN~~~t~~~f~~~~~~~lll~Gn~~~~i~~~~~~----~----~~~~~~~~~~~~-~--~~~~~~-- 138 (394) T protein:vir:62 72 EIKDDIALQILRNPNNYLTQSEFIKLMTNTYLLEGETFPILNGAQIH----L----ASNVFTELDDNL-V--EHFNIG-- 138 (394) T ss_pred ccchhhHHHHhccCCCCCCHHHHHHHHHHHHHhcCCeEEEEecceee----c----cccceEEECCce-E--EEEeeC-- Confidence 34567788899999999999999999999999999999998654333 2 234555554433 2 222221 Q ss_pred CCceeEEEeeeeeEEeecCCCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHccCCcceeeeeCCcCC--HHHHHHHHH Q lcl|Aclame:pro 160 VGTQLVSFADDEVVPIRFFNPDGLERGLSLMESLKSTIFSEDSSRNATAAMWKNAGRPNLVLRHEKRLS--PEAQQRLRE 237 (518) Q Consensus 160 ~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~p~gil~~~~~~~--~e~~~~~~~ 237 (518) .++|++++|||+|+++.++ ++|+||+..+..+|....+++++..++|+||++|+|+|+++..++ +++.+++++ T Consensus 139 ----~~~~~~~eiih~r~~~~d~-~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~il~~~~~~~~~~~~~~~~~~ 213 (394) T protein:vir:62 139 ----GHEIPPCMIRHVKNIGADH-LRGKGILDLGRDTLEGVMSAEKTLTDKYKKGGLLTFLLNLDAHINPQNGAQSKLIN 213 (394) T ss_pred ----CEEechhheEEecCcCCCC-ccccChHHHHHHHHHHHHHHHHHHHHHHHccCCcceEEEeCCCCCcCHHHHHHHHH Confidence 2579999999999988765 689999999999999999999999999999999999999998775 556799999 Q ss_pred HHHHHhcCccccccceeccCCc--ccccccCChhhHHHHHHHHHHHHHHHHHhccchHhhccccccccccHHHHHHHHHH Q lcl|Aclame:pro 238 QFDRAHAGSSNTGKTMVVEEGM--EPIPLQLTAVEMQFIEARQLNREEVCGVYDIAPPIVHILDRATFSNISAQMRAFYR 315 (518) Q Consensus 238 ~~~~~~~g~~n~g~~~vl~~g~--~~~~~~~~~~d~q~~e~~~~~~~~Ia~~fgVpp~~lg~~~~~~~s~~e~~~~~~~~ 315 (518) .|.+.++|..|+|+++|++.|+ ++++++.++.|+||+|.+++++++||++|||||.+||.. +++|+|++.+.|++ T Consensus 214 ~~~~~~~g~~n~g~~~vl~~g~~~~~~~l~~~~~d~q~~e~~~~~~~~Ia~~fgVPp~~lg~~---~~sn~e~~~~~~~~ 290 (394) T protein:vir:62 214 AILDQLESIDEARSVKMIPLGKGYSIDTLKSPLDDEKTLAYLNVYKKDLGKFLGINVDTYTEL---IKEDIEKAMMYIHN 290 (394) T ss_pred HHHHHhccccccCceeEeeCCCceeEEecCCCcchHHHHHHHHHHHHHHHHHhCCCHHHcCCC---CCcCHHHHHHHHHH Confidence 9999999999999999998876 555788899999999999999999999999999999853 56789999999999 Q ss_pred HHHHHHHHHHHHHHHhhhcchhh-ccceeeechhhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHHhCCCCCCccCceee Q lcl|Aclame:pro 316 DTMAIPIARIQSAMDKYVGQYWV-RKNRMKFDIDDVIQPDWEAKSESTQKMVNSGVATPNEGREIMGLPRSDDPKADELY 394 (518) Q Consensus 316 ~~l~P~~~~ie~~ln~~l~~~~~-~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~T~NE~R~~~g~~pi~~~~gD~~~ 394 (518) +||.||+++||++||++|++..+ ..++++||...++.. .++++.+.+++++|+||+||+|+++|+||+++++||+++ T Consensus 291 ~~l~P~~~~ie~~l~~kll~~~~~~~~~~~fd~~~~~~~--~~~~~~~~~~~~~g~~T~NE~R~~~gl~p~~~~~gd~~~ 368 (394) T protein:vir:62 291 KAVRPIMKNFEDHLSLLFYAQNSGKRIKFKINILDFVTY--SNKTNIGYNLVRTAITSPDNVADMLGFPKQNTKESQAIY 368 (394) T ss_pred HHHHHHHHHHHHHHhhhhcCccccCceEEEechhhhcCH--HHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCCCeee Confidence 99999999999999999987543 456777877777655 467888999999999999999999999999999999999 Q ss_pred ecccccccccccccCCCCCCCCCCCCcccCCCCCccCC Q lcl|Aclame:pro 395 ANSALQPLGATPDGAVEGEEAPAPKRPASTPVASLDQS 432 (518) Q Consensus 395 ~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 432 (518) +++|++|++....... . ...++.++. T Consensus 369 ~~~n~~~~~~~~~~~~----~--------~kgge~~en 394 (394) T protein:vir:62 369 ISNDVTEIGKKEATDG----S--------LGGGEENEN 394 (394) T ss_pred cccccccccccccccc----c--------CCCCCCCCC Confidence 9999988764321100 0 000111111 No 62 >protein:vir:4854 Length: 386 # NCBI annotation: putative portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:106 # MgeName: DT1 # Cross-refs: genbank:acc:NP_049394;genbank:gi:9632422;genbank:GeneID:1258515 Probab=100.00 E-value=2.7e-79 Score=451.32 Aligned_cols=383 Identities=15% Similarity=0.160 Sum_probs=313.9 Q ss_pred CCCCCCCC-CccccccccchhhhhhhccCccCCcccCccchhhHHHHhhhHHHHHHHHHHHHhhccCceEEEEecCCcee Q lcl|Aclame:pro 1 MLLANGQT-LSAPAMAELSPQMQDSYYYAPAVGMQLERQFSLYGGIYKNQPWVRTVIAKRAQALARLPVKCMFTSGDTET 79 (518) Q Consensus 1 ~~f~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~v~~ia~~ia~lp~~v~~~~~~~~~ 79 (518) -+|++... +.++.. ....|.... .... ...+.....++.+.++++++|++||++||++||++|++++++ T Consensus 2 ~~f~~~~~~~~~~~~-~~~~~~~~~-~~~~--~~~~~~~~~v~~~~~~~~~~v~~~i~~ia~~ia~~p~~~~~~------ 71 (386) T protein:vir:48 2 PIFNITNLATESPPI-SQGGFFDIT-DPDF--LSTLNGSEWVSAESALRNSDLFSIINQLSNDLATVKLTASRK------ 71 (386) T ss_pred ccccccccccccccc-ccccccccc-cchh--cccccCCceechhhhhcchHHHHHHHHHHHhhccCceeeccc------ Confidence 35554222 222211 111111110 0000 011122334556778999999999999999999999999853 Q ss_pred eecchHHHHHhhccCccCCHHHHHHHHHHHHHHcCCeeEEeeeCCCCceeeeeeeCCcceEEEeccCcceEEEEeeccCC Q lcl|Aclame:pro 80 EEHDTGYAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQKNKSGTPEKLMPMHPSRVAIKRNSRTGRYEYYFQAGAG 159 (518) Q Consensus 80 ~~~~~~~~~l~~~PN~~~t~~~f~~~~~~~~ll~G~~~~~i~~~~~G~~~~l~~l~p~~v~~~~~~~~~~~~~~~~~~~~ 159 (518) ....|+.+||++||+++||+.++.+++++||+|++++++.+|++++|+|++|++|++..+.+++.++|.+...+. T Consensus 72 -----~~~~l~~~pN~~~t~~~f~~~~~~~lll~Gna~~~i~r~~~g~~~~L~~l~~~~v~v~~~~~~~~~~y~~~~~~~ 146 (386) T protein:vir:48 72 -----QLQGIIDNPSNNANRFNFYQSIFAQMLLGGEAFAYRWRNENGRDMKWEYLRPSQVSFNRLDNKDGIYYNITFDDP 146 (386) T ss_pred -----hhHHHhhcCCCCCCHHHHHHHHHHHhhhcCcEEEEEEECCCCcEEEEEEecCceeEEEEcCCCceEEEEEEecCc Confidence 356799999999999999999999999999999999999999999999999999999999888899999888777 Q ss_pred CCceeEEEeeeeeEEeecCCCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHccCCcceeeeeCCcCCHHHHHHHHHHH Q lcl|Aclame:pro 160 VGTQLVSFADDEVVPIRFFNPDGLERGLSLMESLKSTIFSEDSSRNATAAMWKNAGRPNLVLRHEKRLSPEAQQRLREQF 239 (518) Q Consensus 160 ~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~p~gil~~~~~~~~e~~~~~~~~~ 239 (518) ..+..+.|++++|||++++++++.++|+||+..+..++..+.++++++.++|+||++|+++|+.+..+++++.+++++.| T Consensus 147 ~~~~~~~~~~~evih~~~~~~~~~~~G~s~i~~~~~~i~~~~~~~~~~~~~~~ng~~~~~ii~~~~~~~~e~~~~~~~~~ 226 (386) T protein:vir:48 147 RIPPKQHVPQGDVLHFKLLSVDGGLTSVSPLMALSRELNIQKASDKLTLNSLKNALNANGILKIKGGGLLDFKTKLSRSR 226 (386) T ss_pred cccceeEecCccEEEecCCCCCCceeeccHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEeCCCCCHHHHHHHHHHH Confidence 77778899999999999999999899999999999999999999999999999999999999999999999999999998 Q ss_pred HHHhcCccccccceeccCCcccccccCChhhHHHHHHHHHHHHHHHHHhccchHhhccccccccccHHHHHHHHHHHHHH Q lcl|Aclame:pro 240 DRAHAGSSNTGKTMVVEEGMEPIPLQLTAVEMQFIEARQLNREEVCGVYDIAPPIVHILDRATFSNISAQMRAFYRDTMA 319 (518) Q Consensus 240 ~~~~~g~~n~g~~~vl~~g~~~~~~~~~~~d~q~~e~~~~~~~~Ia~~fgVpp~~lg~~~~~~~s~~e~~~~~~~~~~l~ 319 (518) .... .|+|+++|+++|++|++++.+++|+||+|++++++++||++|||||.++|. .+++++.+++.+.|+++||. T Consensus 227 ~~~~---~n~g~~~vl~~g~~~~~l~~~~~d~q~~e~~~~~~~~Ia~~fgVPp~~lg~--~~~~~~~e~~~~~~~~~~l~ 301 (386) T protein:vir:48 227 QAMK---QMQGGPLVLDDLEEFTPLEIKSNVSQLLKQADWTTGQFAKVYGIPENVVGG--QGDQQSSLEMSLDLYNKAVS 301 (386) T ss_pred HHhh---cCCCCceecCCCceEEEcCCChhHHHHHHHHHHHHHHHHHHhCCCHHHhCC--CCCcccHHHHHHHHHHHHHH Confidence 7654 578999999999999999999999999999999999999999999999986 45788999999999999999 Q ss_pred HHHHHHHHHHHhhhcchhhccceeeechhhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHHhCCCCCCccCceee-eccc Q lcl|Aclame:pro 320 IPIARIQSAMDKYVGQYWVRKNRMKFDIDDVIQPDWEAKSESTQKMVNSGVATPNEGREIMGLPRSDDPKADELY-ANSA 398 (518) Q Consensus 320 P~~~~ie~~ln~~l~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~T~NE~R~~~g~~pi~~~~gD~~~-~~~n 398 (518) |+++.||++|+++|++. +++|....++.|...++..+.+++++|++|+||+|+++|++|++ ++|... ...+ T Consensus 302 P~~~~ie~~l~~~l~~~------~~~~~~~~~~~d~~~~~~~~~~l~~~g~~t~nE~r~~lg~~~~~--~~~~~~~~~~~ 373 (386) T protein:vir:48 302 RYLRPFLSELSQKLSCD------VDADILPAVDPTGSNSVSRINSMVKSGTLAQNQGLYILQQAEIL--PKELPEGENPN 373 (386) T ss_pred HHHHHHHHHHHHhhcch------hhcchhhhhccChHHHHHHHHHHHhCCCcCHHHHHHHhhcCCCC--CccchhhcCCC Confidence 99999999999999875 34666667778888899999999999999999999999999986 355321 1112 Q ss_pred ccccccccccCCCCCCCCCCCCcccCCCCCccCC Q lcl|Aclame:pro 399 LQPLGATPDGAVEGEEAPAPKRPASTPVASLDQS 432 (518) Q Consensus 399 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 432 (518) ..|+.. +...+ ++ T Consensus 374 ~~~~~g---Gd~~~------------------~~ 386 (386) T protein:vir:48 374 KTTLKG---GEING------------------ED 386 (386) T ss_pred CCccCC---CCCCC------------------CC Confidence 221110 00000 00 No 63 >protein:vir:99312 Length: 563 # NCBI annotation: putative portal protein # Family: family:all:2446 # MgeID: mge:1655 # MgeName: K # Cross-refs: genbank:acc:YP_024471;genbank:gi:48696430;genbank:GeneID:2948040 Probab=100.00 E-value=1.5e-79 Score=452.75 Aligned_cols=468 Identities=13% Similarity=0.128 Sum_probs=312.6 Q ss_pred CCCCCCCCCccccccccchhhhhh--hccCccCCcccC--ccchhhHHHHhhhHHHHHHHHHHHHhhcc----------- Q lcl|Aclame:pro 1 MLLANGQTLSAPAMAELSPQMQDS--YYYAPAVGMQLE--RQFSLYGGIYKNQPWVRTVIAKRAQALAR----------- 65 (518) Q Consensus 1 ~~f~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~--~~~~~~~~~~~~~~~v~~~v~~ia~~ia~----------- 65 (518) -.+.++.....+ +...|.+... +.+.......+. .+.......+..+++|++||+++++.||+ T Consensus 44 ~~~~~~~~~~~~--a~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~n~i~~~~I~t~~~~vA~~~~~~~~~~~~ 121 (563) T protein:vir:99 44 QDLTKSLYGQQQ--AYAEPFIEMMDTNPEFRDKRSYMKNEHNLHDVLKKFGNNPILNAIILTRSNQVAMYCQPARYSEKG 121 (563) T ss_pred HHHHhhhccCCC--cchhhhHhhhcccccccccccCCCCcccHHHHHHHhhcchHHHHHHHHHHHHHHHHhhhhhhhccc Confidence 133333333332 2344444221 111111111122 22233455667889999999999999885 Q ss_pred --CceEEEEecCCcee--eecchHHHHHhh----ccCcc-CCHHHHHHHHHHHHHHcCCeeEEee--eCCCCceeeeeee Q lcl|Aclame:pro 66 --LPVKCMFTSGDTET--EEHDTGYAKLLA----DPCEY-LDPFAFWEWVASTLDIYGETYLAIQ--KNKSGTPEKLMPM 134 (518) Q Consensus 66 --lp~~v~~~~~~~~~--~~~~~~~~~l~~----~PN~~-~t~~~f~~~~~~~~ll~G~~~~~i~--~~~~G~~~~l~~l 134 (518) ++++++..+..+.. ....+++..++. .|||+ +|+.+|+++++.+++++||+|++++ ++..|++++|||+ T Consensus 122 ~~~~i~l~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~p~~~t~~~f~~~lv~~lll~Gn~~~~~~~~rd~~G~~~~L~pl 201 (563) T protein:vir:99 122 LGFEVRLRDLDAEPGRKEKEEMKRIEDFIVNTGKDKDVDRDSFQTFCKKIVRDTYIYDQVNFEKVFNKNNKTKLEKFIAV 201 (563) T ss_pred ccceeEEeecCCCcchhhhhhhHHHHHHhhhcCCCCCCCcchHHHHHHHHHHHHHhcCCeEEEEEEEecCCCceEEEEEe Confidence 57777766554422 233444443333 23333 6899999999999999999999876 6677999999999 Q ss_pred CCcceEEEeccCcceEE----EEeeccCCCCceeEEEeeeeeEEee-cCCCC--cccccchHHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 135 HPSRVAIKRNSRTGRYE----YYFQAGAGVGTQLVSFADDEVVPIR-FFNPD--GLERGLSLMESLKSTIFSEDSSRNAT 207 (518) Q Consensus 135 ~p~~v~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~vih~~-~~~~~--~~~~G~s~~~~~~~~i~~~~~~~~~~ 207 (518) +|.+|++..+.++.... |.+. ..++....|+++++||++ +++.+ ...||+||+..+..+|....++++++ T Consensus 202 ~p~~V~v~~~~~g~~~~~~~~y~~~---~~g~~~~~~~~~evI~~~~~~~~d~~~~~~G~Spi~~a~~~i~~~~~~~~~~ 278 (563) T protein:vir:99 202 DPSTIFYATDKKGKIIKGGKRFVQV---VDKRVVASFTSRELAMGIRNPRTELSSSGYGLSEVEIAMKEFIAYNNTESFN 278 (563) T ss_pred CCceeEEEECCCCceeccceeEEEE---eCCceeEEecCcceEEEeccCCCCcccCcccchHHHHHHHHHHHHHHHHHHH Confidence 99999999887765432 2222 224455678899987655 44432 35689999999999999999999999 Q ss_pred HHHHHccCCcceeeeeCC--cCCHHHHHHHHHHHHHHhcCccccccc-eeccCCcccccccCChhhHHHHHHHHHHHHHH Q lcl|Aclame:pro 208 AAMWKNAGRPNLVLRHEK--RLSPEAQQRLREQFDRAHAGSSNTGKT-MVVEEGMEPIPLQLTAVEMQFIEARQLNREEV 284 (518) Q Consensus 208 ~~~~~ng~~p~gil~~~~--~~~~e~~~~~~~~~~~~~~g~~n~g~~-~vl~~g~~~~~~~~~~~d~q~~e~~~~~~~~I 284 (518) .++|+||++|+|||+++. .+++++++++++.|++.++|.+|+|++ +|+++|++|+++++++.|+||+|++++++++| T Consensus 279 ~~~f~ng~~p~giL~~~~~~~ls~e~~~~~~~~~~~~~~G~~nagk~~~vl~~G~~~~~l~~~~~d~qfle~~~~~~~~I 358 (563) T protein:vir:99 279 DRFFSHGGTTRGILQIRSDQQQSQHALENFKREWKSSLSGINGSWQIPVVMADDIKFVNMTPTANDMQFEKWLNYLINII 358 (563) T ss_pred HHHHHccCCCceEEEeCCCCCCCHHHHHHHHHHHHHHhccccccccceEEcCCCceEEeccCChhHHHHHHHHHHHHHHH Confidence 999999999999999875 479999999999999999999999997 78999999999999999999999999999999 Q ss_pred HHHhccchHhhcccccc-----------ccccHHHHHHHHHHHHHHHHHHHHHHHHHhhhcchhhccceeeechhhhhcc Q lcl|Aclame:pro 285 CGVYDIAPPIVHILDRA-----------TFSNISAQMRAFYRDTMAIPIARIQSAMDKYVGQYWVRKNRMKFDIDDVIQP 353 (518) Q Consensus 285 a~~fgVpp~~lg~~~~~-----------~~s~~e~~~~~~~~~~l~P~~~~ie~~ln~~l~~~~~~~~~~~fd~~~l~~~ 353 (518) |++|||||++||+.+.+ +++|++++.+.|+++||+||+..||++||++|++..+..+.++| ++. T Consensus 359 a~afgVPp~~lG~~~~~~~~~~~~~ss~~~sn~e~~~~~f~~~tL~P~l~~ie~~ln~~L~~~~~~~~~~~f-----~r~ 433 (563) T protein:vir:99 359 SALYGIDPAEIGFPNRGGATGSKGGSTLNEADPGKKQQQSQNKGLQPLLRFIEDLVNRHIISEYGDKYTFQF-----VGG 433 (563) T ss_pred HHHhCCCHHHccccccccccccccccchhhccHHHHHHHHHHHHHHHHHHHHHHHHHhhhchhcccccEEEe-----ccC Confidence 99999999999986544 45789999999999999999999999999999987766555544 577 Q ss_pred CHHHHHHHHH--HHHhCCCcCHHHHHHHHhCCCCCCccCceeeecccccccccccccCCCCCCCCCCC-CcccCC-CCCc Q lcl|Aclame:pro 354 DWEAKSESTQ--KMVNSGVATPNEGREIMGLPRSDDPKADELYANSALQPLGATPDGAVEGEEAPAPK-RPASTP-VASL 429 (518) Q Consensus 354 d~~~~~~~~~--~~~~~g~~T~NE~R~~~g~~pi~~~~gD~~~~~~n~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~ 429 (518) |.+++.+.+. .++++|+||+||+|+++||+|++ |||+++.|.++++++........+....+.. ++.... ..+. T Consensus 434 D~~~~~e~~~~~~~~~~G~lT~NE~R~~~gl~Pi~--gGD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 511 (563) T protein:vir:99 434 DTKSATDKLNILKLETQIFKTVNEAREEQGKKPIE--GGDIILDASFLQGTAQLQQDKQYNDGKQKERLQMMMSLLEGDN 511 (563) T ss_pred CHHHHHHHHHHHHHhcCCccCHHHHHHHhCCCCCC--CcceeecccccccccccccccCCCccccchhhhhcccccCCCC Confidence 8888888765 46889999999999999999996 8999999999988876543322211111100 000000 0000 Q ss_pred cCCccccccccChhhhcchhHHHHHHHHH-HhhccCcchhHHHHHHHHHHHhhhhhhhcccccch Q lcl|Aclame:pro 430 DQSPPASVPGLSPTNSDRSTDSGKTEPRR-LMQKPPPKESSPKHLRAVKGAMGRGKDIKGFALQL 493 (518) Q Consensus 430 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 493 (518) +.. ....+.+...+.......++-+.+. ...++.+++.+..+ ..| ...+.. T Consensus 512 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~---~~~~~~ 563 (563) T protein:vir:99 512 DDS-EEGQSTDSSNDDKEIGTDAQIKGDDNVYRTQTSNKGQGRK---------GEK---SSDFKH 563 (563) T ss_pred CCC-CCCCCCCCCCCccccccccccccccccccccCcccccccc---------CcC---cccccC Confidence 000 0000000000000000000000000 00011111111100 000 000000 No 64 >protein:vir:95599 Length: 563 # NCBI annotation: ORF014 # Family: family:all:2446 # MgeID: mge:1577 # MgeName: G1 # Cross-refs: genbank:acc:YP_240900;genbank:gi:66394963;genbank:GeneID:5132540 Probab=100.00 E-value=1.5e-79 Score=452.75 Aligned_cols=468 Identities=13% Similarity=0.128 Sum_probs=312.6 Q ss_pred CCCCCCCCCccccccccchhhhhh--hccCccCCcccC--ccchhhHHHHhhhHHHHHHHHHHHHhhcc----------- Q lcl|Aclame:pro 1 MLLANGQTLSAPAMAELSPQMQDS--YYYAPAVGMQLE--RQFSLYGGIYKNQPWVRTVIAKRAQALAR----------- 65 (518) Q Consensus 1 ~~f~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~--~~~~~~~~~~~~~~~v~~~v~~ia~~ia~----------- 65 (518) -.+.++.....+ +...|.+... +.+.......+. .+.......+..+++|++||+++++.||+ T Consensus 44 ~~~~~~~~~~~~--a~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~n~i~~~~I~t~~~~vA~~~~~~~~~~~~ 121 (563) T protein:vir:95 44 QDLTKSLYGQQQ--AYAEPFIEMMDTNPEFRDKRSYMKNEHNLHDVLKKFGNNPILNAIILTRSNQVAMYCQPARYSEKG 121 (563) T ss_pred HHHHhhhccCCC--cchhhhHhhhcccccccccccCCCCcccHHHHHHHhhcchHHHHHHHHHHHHHHHHhhhhhhhccc Confidence 133333333332 2344444221 111111111122 22233455667889999999999999885 Q ss_pred --CceEEEEecCCcee--eecchHHHHHhh----ccCcc-CCHHHHHHHHHHHHHHcCCeeEEee--eCCCCceeeeeee Q lcl|Aclame:pro 66 --LPVKCMFTSGDTET--EEHDTGYAKLLA----DPCEY-LDPFAFWEWVASTLDIYGETYLAIQ--KNKSGTPEKLMPM 134 (518) Q Consensus 66 --lp~~v~~~~~~~~~--~~~~~~~~~l~~----~PN~~-~t~~~f~~~~~~~~ll~G~~~~~i~--~~~~G~~~~l~~l 134 (518) ++++++..+..+.. ....+++..++. .|||+ +|+.+|+++++.+++++||+|++++ ++..|++++|||+ T Consensus 122 ~~~~i~l~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~p~~~t~~~f~~~lv~~lll~Gn~~~~~~~~rd~~G~~~~L~pl 201 (563) T protein:vir:95 122 LGFEVRLRDLDAEPGRKEKEEMKRIEDFIVNTGKDKDVDRDSFQTFCKKIVRDTYIYDQVNFEKVFNKNNKTKLEKFIAV 201 (563) T ss_pred ccceeEEeecCCCcchhhhhhhHHHHHHhhhcCCCCCCCcchHHHHHHHHHHHHHhcCCeEEEEEEEecCCCceEEEEEe Confidence 57777766554422 233444443333 23333 6899999999999999999999876 6677999999999 Q ss_pred CCcceEEEeccCcceEE----EEeeccCCCCceeEEEeeeeeEEee-cCCCC--cccccchHHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 135 HPSRVAIKRNSRTGRYE----YYFQAGAGVGTQLVSFADDEVVPIR-FFNPD--GLERGLSLMESLKSTIFSEDSSRNAT 207 (518) Q Consensus 135 ~p~~v~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~vih~~-~~~~~--~~~~G~s~~~~~~~~i~~~~~~~~~~ 207 (518) +|.+|++..+.++.... |.+. ..++....|+++++||++ +++.+ ...||+||+..+..+|....++++++ T Consensus 202 ~p~~V~v~~~~~g~~~~~~~~y~~~---~~g~~~~~~~~~evI~~~~~~~~d~~~~~~G~Spi~~a~~~i~~~~~~~~~~ 278 (563) T protein:vir:95 202 DPSTIFYATDKKGKIIKGGKRFVQV---VDKRVVASFTSRELAMGIRNPRTELSSSGYGLSEVEIAMKEFIAYNNTESFN 278 (563) T ss_pred CCceeEEEECCCCceeccceeEEEE---eCCceeEEecCcceEEEeccCCCCcccCcccchHHHHHHHHHHHHHHHHHHH Confidence 99999999887765432 2222 224455678899987655 44432 35689999999999999999999999 Q ss_pred HHHHHccCCcceeeeeCC--cCCHHHHHHHHHHHHHHhcCccccccc-eeccCCcccccccCChhhHHHHHHHHHHHHHH Q lcl|Aclame:pro 208 AAMWKNAGRPNLVLRHEK--RLSPEAQQRLREQFDRAHAGSSNTGKT-MVVEEGMEPIPLQLTAVEMQFIEARQLNREEV 284 (518) Q Consensus 208 ~~~~~ng~~p~gil~~~~--~~~~e~~~~~~~~~~~~~~g~~n~g~~-~vl~~g~~~~~~~~~~~d~q~~e~~~~~~~~I 284 (518) .++|+||++|+|||+++. .+++++++++++.|++.++|.+|+|++ +|+++|++|+++++++.|+||+|++++++++| T Consensus 279 ~~~f~ng~~p~giL~~~~~~~ls~e~~~~~~~~~~~~~~G~~nagk~~~vl~~G~~~~~l~~~~~d~qfle~~~~~~~~I 358 (563) T protein:vir:95 279 DRFFSHGGTTRGILQIRSDQQQSQHALENFKREWKSSLSGINGSWQIPVVMADDIKFVNMTPTANDMQFEKWLNYLINII 358 (563) T ss_pred HHHHHccCCCceEEEeCCCCCCCHHHHHHHHHHHHHHhccccccccceEEcCCCceEEeccCChhHHHHHHHHHHHHHHH Confidence 999999999999999875 479999999999999999999999997 78999999999999999999999999999999 Q ss_pred HHHhccchHhhcccccc-----------ccccHHHHHHHHHHHHHHHHHHHHHHHHHhhhcchhhccceeeechhhhhcc Q lcl|Aclame:pro 285 CGVYDIAPPIVHILDRA-----------TFSNISAQMRAFYRDTMAIPIARIQSAMDKYVGQYWVRKNRMKFDIDDVIQP 353 (518) Q Consensus 285 a~~fgVpp~~lg~~~~~-----------~~s~~e~~~~~~~~~~l~P~~~~ie~~ln~~l~~~~~~~~~~~fd~~~l~~~ 353 (518) |++|||||++||+.+.+ +++|++++.+.|+++||+||+..||++||++|++..+..+.++| ++. T Consensus 359 a~afgVPp~~lG~~~~~~~~~~~~~ss~~~sn~e~~~~~f~~~tL~P~l~~ie~~ln~~L~~~~~~~~~~~f-----~r~ 433 (563) T protein:vir:95 359 SALYGIDPAEIGFPNRGGATGSKGGSTLNEADPGKKQQQSQNKGLQPLLRFIEDLVNRHIISEYGDKYTFQF-----VGG 433 (563) T ss_pred HHHhCCCHHHccccccccccccccccchhhccHHHHHHHHHHHHHHHHHHHHHHHHHhhhchhcccccEEEe-----ccC Confidence 99999999999986544 45789999999999999999999999999999987766555544 577 Q ss_pred CHHHHHHHHH--HHHhCCCcCHHHHHHHHhCCCCCCccCceeeecccccccccccccCCCCCCCCCCC-CcccCC-CCCc Q lcl|Aclame:pro 354 DWEAKSESTQ--KMVNSGVATPNEGREIMGLPRSDDPKADELYANSALQPLGATPDGAVEGEEAPAPK-RPASTP-VASL 429 (518) Q Consensus 354 d~~~~~~~~~--~~~~~g~~T~NE~R~~~g~~pi~~~~gD~~~~~~n~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~ 429 (518) |.+++.+.+. .++++|+||+||+|+++||+|++ |||+++.|.++++++........+....+.. ++.... ..+. T Consensus 434 D~~~~~e~~~~~~~~~~G~lT~NE~R~~~gl~Pi~--gGD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 511 (563) T protein:vir:95 434 DTKSATDKLNILKLETQIFKTVNEAREEQGKKPIE--GGDIILDASFLQGTAQLQQDKQYNDGKQKERLQMMMSLLEGDN 511 (563) T ss_pred CHHHHHHHHHHHHHhcCCccCHHHHHHHhCCCCCC--CcceeecccccccccccccccCCCccccchhhhhcccccCCCC Confidence 8888888765 46889999999999999999996 8999999999988876543322211111100 000000 0000 Q ss_pred cCCccccccccChhhhcchhHHHHHHHHH-HhhccCcchhHHHHHHHHHHHhhhhhhhcccccch Q lcl|Aclame:pro 430 DQSPPASVPGLSPTNSDRSTDSGKTEPRR-LMQKPPPKESSPKHLRAVKGAMGRGKDIKGFALQL 493 (518) Q Consensus 430 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 493 (518) +.. ....+.+...+.......++-+.+. ...++.+++.+..+ ..| ...+.. T Consensus 512 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~---~~~~~~ 563 (563) T protein:vir:95 512 DDS-EEGQSTDSSNDDKEIGTDAQIKGDDNVYRTQTSNKGQGRK---------GEK---SSDFKH 563 (563) T ss_pred CCC-CCCCCCCCCCCccccccccccccccccccccCcccccccc---------CcC---cccccC Confidence 000 0000000000000000000000000 00011111111100 000 000000 No 65 >protein:vir:4194 Length: 540 # NCBI annotation: putative portal protein # Family: family:all:1379 # ACLAME annotation(s): phi:0000161 - phage head/capsid # MgeID: mge:88 # MgeName: psiM100 # Cross-refs: genbank:acc:NP_071819;genbank:gi:11863102;genbank:GeneID:1257604 Probab=100.00 E-value=1.4e-78 Score=447.36 Aligned_cols=484 Identities=14% Similarity=0.143 Sum_probs=331.4 Q ss_pred CCCCCCCCccccccc------cchhhhhhhccCccCCcccCccchhhHHHHhhhHHHHHHHHHHHHhhccCceEEEEecC Q lcl|Aclame:pro 2 LLANGQTLSAPAMAE------LSPQMQDSYYYAPAVGMQLERQFSLYGGIYKNQPWVRTVIAKRAQALARLPVKCMFTSG 75 (518) Q Consensus 2 ~f~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~v~~ia~~ia~lp~~v~~~~~ 75 (518) ||....+...-.+.. -++.+...-.+.+ .. ...++...+.++..+++|++||++||++||++|++++.+.. T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--pp~~~~~La~~~~~n~~v~scI~~ia~~ia~~~~~i~~~~~ 77 (540) T protein:vir:41 1 MFNYHLSIKSLEKYRAIKGDTDSQALKEDRFEEY-VE--PKVHPLVLLSLLQVNPYHASACSIKANDILRTGYLIDGDDG 77 (540) T ss_pred CCCcccChhhccchhhhhccccccccccCCCCcc-cc--CCCCHHHHHHHHHhcHHHHHHHHHHHHHHhcCCceEecCcc Confidence 787776654422211 1111111111111 11 12234556688889999999999999999999999865432 Q ss_pred CceeeecchHHHHHhhccCccCCHHHHHHHHHHHHHHcCCeeEEeeeCCCCceeeeeeeCCcceEEEeccCcc------- Q lcl|Aclame:pro 76 DTETEEHDTGYAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQKNKSGTPEKLMPMHPSRVAIKRNSRTG------- 148 (518) Q Consensus 76 ~~~~~~~~~~~~~l~~~PN~~~t~~~f~~~~~~~~ll~G~~~~~i~~~~~G~~~~l~~l~p~~v~~~~~~~~~------- 148 (518) . +..+ .||++||+++||++++.+++++||+|++++++..|++++|+|++|.+|++..+..+. T Consensus 78 ~---------~~~~--lpN~~~t~~~f~~~~v~dlll~Gnayv~i~r~~~G~~~~L~~i~~~~V~v~~~~~~~~~~~d~~ 146 (540) T protein:vir:41 78 G---------VEEL--LRACRPSFEFILLQALEDLQVFNYCTLEVVRDDQGEPVRLDYIPAHTVRVHRDGSRYMQTWDGI 146 (540) T ss_pred c---------hhhh--ccCCCCCHHHHHHHHHHHHHhcCCeEEEEEECCCCcEEEEEEeCCcceEEeEcCceeEeeecCc Confidence 1 1222 499999999999999999999999999999999999999999999999987654321 Q ss_pred eEEEEeec------cCCCCceeEEEeeeeeEEeecCCCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHccCCcceeee Q lcl|Aclame:pro 149 RYEYYFQA------GAGVGTQLVSFADDEVVPIRFFNPDGLERGLSLMESLKSTIFSEDSSRNATAAMWKNAGRPNLVLR 222 (518) Q Consensus 149 ~~~~~~~~------~~~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~p~gil~ 222 (518) ...|...+ ....+...+.+++++|||||.+++.+.+||+||+..+..++....++++++.++|+||++|+|||+ T Consensus 147 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~eViHir~~~~~~~~~G~Spi~~~~~~i~~~~~~~~~~~~~f~Ng~~p~giL~ 226 (540) T protein:vir:41 147 HVTYFKDYRYEGEVNPDNGEDQDGVGANEIIFIHLPSPICSYYGVPRYLSAAPSILAMQKIDEYNYAFFDNYTIPSYVIT 226 (540) T ss_pred eeeeeecccccceeeccccccceeecccceEEecCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEE Confidence 11111111 111233456799999999999998888999999999999999999999999999999999999999 Q ss_pred eCCcCCHHH----------HHHHHHHHHHHhcCc-cccccceecc------CCcccccccCChhhHHHHHHHHHHHHHHH Q lcl|Aclame:pro 223 HEKRLSPEA----------QQRLREQFDRAHAGS-SNTGKTMVVE------EGMEPIPLQLTAVEMQFIEARQLNREEVC 285 (518) Q Consensus 223 ~~~~~~~e~----------~~~~~~~~~~~~~g~-~n~g~~~vl~------~g~~~~~~~~~~~d~q~~e~~~~~~~~Ia 285 (518) +++.+++++ .+++++.|.+.++|. +|+|+++||+ +|++|++++++++|+||+|++++++++|| T Consensus 227 ~~g~l~~e~~~~~~~~~~~~~~~~~~~~~~~~g~~~nag~~~vLe~~~~~~~g~~~~pl~~~~~d~qfle~~~~~~~eIa 306 (540) T protein:vir:41 227 VTGEFEDEMELGSDGEPTGRTVLQGLIEDNFKYLKEAPHTPLVFSIPGGDTVEVTFTPLNTSQKELSFREYAAEKKHDIA 306 (540) T ss_pred eCcccCchhccchHHHHHHHHHHHHHHHHHhccccccccceEEEecCCCcccceeEEecccchhHHHHHHHHHHHHHHHH Confidence 987765443 467788888888774 5899999985 79999999999999999999999999999 Q ss_pred HHhccchHhhccccc--cccccHHHHHHHHHHHHHHHHHHHHHHHHHhhhcchhhccceeeechhhhhccCHHHHHHHHH Q lcl|Aclame:pro 286 GVYDIAPPIVHILDR--ATFSNISAQMRAFYRDTMAIPIARIQSAMDKYVGQYWVRKNRMKFDIDDVIQPDWEAKSESTQ 363 (518) Q Consensus 286 ~~fgVpp~~lg~~~~--~~~s~~e~~~~~~~~~~l~P~~~~ie~~ln~~l~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~ 363 (518) ++|||||+++|+.+. .+++|++++.+.|+++||.|++++||++||++|++....+++++||.+.++++|.+++ +. T Consensus 307 ~afgVPp~~lG~~~~~~~n~sn~eq~~~~f~~~tL~P~~~~ie~~ln~~L~~~~~~~~~i~f~~~~ll~~D~~~~---~~ 383 (540) T protein:vir:41 307 AAHMIDPYRLGITDVGPLGGNFAEVARRTYYESVVRPQQEIVSSVLTDFIQLKLDPGARFVFNEEILMESEFVHN---YA 383 (540) T ss_pred HHhCCCHHHcCcccCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCceEEEecchhhcchHHHHH---HH Confidence 999999999998754 4678999999999999999999999999999999887788999999999999886554 56 Q ss_pred HHHhCCCcCHHHHHHHHhCCCCCCccCceeeecccccccccccccCCCCCCCCCCCCcccCCCCCccCCccccccccChh Q lcl|Aclame:pro 364 KMVNSGVATPNEGREIMGLPRSDDPKADELYANSALQPLGATPDGAVEGEEAPAPKRPASTPVASLDQSPPASVPGLSPT 443 (518) Q Consensus 364 ~~~~~g~~T~NE~R~~~g~~pi~~~~gD~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 443 (518) +++++|++|+||+|+.+ ++++ |++|.++.|.|+.............++.+. + ........+........+ T Consensus 384 ~lv~~G~lT~NE~Re~L--~g~e-~gdd~~l~p~n~~~~~~~~~~~~~~~~~~~--~-~~k~~~~~~~~~~~~~~~---- 453 (540) T protein:vir:41 384 LLVQCGVLTPSEVREKL--FGLD-GGPDMFMVPSSIGKSAMKRQKRNYEKNQIN--E-IKRTYAKYKPRIQEIISS---- 453 (540) T ss_pred HHHhCCCCCHHHHHHHh--CcCc-CCCcccccccccccccccccccccCCCCcc--c-cccccchhcccccCcccc---- Confidence 78999999999999854 3333 245666667776543322211111111111 1 111111111111111101 Q ss_pred hhcchhHHHHHHH-HHHhhccCcchhHHHHHHHHHHHhhhhhhhccccc-ch-----hhhhhhHHHHHHHHHHHHhhhcc Q lcl|Aclame:pro 444 NSDRSTDSGKTEP-RRLMQKPPPKESSPKHLRAVKGAMGRGKDIKGFAL-QL-----AEKYPDDLEDILLAVQLALAERK 516 (518) Q Consensus 444 ~~~~~~~~~~~~~-~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-----~~~~~~~~~~~~~~~~~~~~~~~ 516 (518) ..+.+....+. +........++-..|+...+..+||..-.+-++-- -| -|.|. ++..|.-.-.-+++ T Consensus 454 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~ 527 (540) T protein:vir:41 454 --ESPLEDKKKKIDEVLSDFRAEAYENGKKMLSIAGDMGTMSAINRGVSMIPPKPSNLEAYE----DLLAASVDDIVERI 527 (540) T ss_pred --ccccccccccccccccccCCccccchhHHHHHhhhhhhhhhhhcCceecCCCCcchHHHH----HHHHhhHHHHHHHH Confidence 11111111111 11111222233456777777888887665544321 11 13332 22222222222222 Q ss_pred cC Q lcl|Aclame:pro 517 DN 518 (518) Q Consensus 517 ~~ 518 (518) -. T Consensus 528 ~~ 529 (540) T protein:vir:41 528 RH 529 (540) T ss_pred HH Confidence 22 No 66 >protein:vir:100187 Length: 385 # NCBI annotation: putative portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:1524 # MgeName: phi AT3 # Cross-refs: genbank:acc:YP_025029;genbank:gi:48697262;genbank:GeneID:2948285 Probab=100.00 E-value=2e-78 Score=446.60 Aligned_cols=375 Identities=16% Similarity=0.204 Sum_probs=301.3 Q ss_pred CCCCCC---CCCccccccccchhhhhhhccCccCCcccCccchhhHHHHhhhHHHHHHHHHHHHhhccCceEEEEecCCc Q lcl|Aclame:pro 1 MLLANG---QTLSAPAMAELSPQMQDSYYYAPAVGMQLERQFSLYGGIYKNQPWVRTVIAKRAQALARLPVKCMFTSGDT 77 (518) Q Consensus 1 ~~f~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~v~~ia~~ia~lp~~v~~~~~~~ 77 (518) =||.+. ............+.....+.+.. ....++.+.++++++|++||++||++||++|+++++. T Consensus 2 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~v~~~~al~~~~v~~~i~~ia~~ia~~p~~v~~~---- 70 (385) T protein:vir:10 2 GLLTPRNFNKRKAKNMVYPSNPAFFTTTVGGM-------QLSYVSALSALQNTNVYSVINRIASDVASAHFKTENT---- 70 (385) T ss_pred ccccchhcccccccccccccchhhhhhhcccc-------CccccCHHHhhccHHHHHHHHHHHHHHhhCceeeecc---- Confidence 122111 11111111122222222222111 1223456778999999999999999999999998742 Q ss_pred eeeecchHHHHHhhccCccCCHHHHHHHHHHHHHHcCCeeEEeeeCCCCceeeeeeeCCcceEEEeccCcceEEEEeecc Q lcl|Aclame:pro 78 ETEEHDTGYAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQKNKSGTPEKLMPMHPSRVAIKRNSRTGRYEYYFQAG 157 (518) Q Consensus 78 ~~~~~~~~~~~l~~~PN~~~t~~~f~~~~~~~~ll~G~~~~~i~~~~~G~~~~l~~l~p~~v~~~~~~~~~~~~~~~~~~ 157 (518) ....|+.+||++||+++||+.++.+++++||+|++++++ +.+++|+++.+|++..+..+ ..|.+.. T Consensus 71 -------~~~~ll~~PN~~~t~~~f~~~~~~~l~l~Gn~~~~i~r~----~~~~~p~~~~~v~~~~~~~~--~~~~~~~- 136 (385) T protein:vir:10 71 -------ATLNRLESPSSLIGRFSFWQGALMQLCLSGNDYIPLVGQ----NLEHIPNSDVQINYLPGNMG--IVYTVLE- 136 (385) T ss_pred -------chhhhhhcCCCCCCHHHHHHHHHHHhhhcCCeEEEEEcC----ceeEeecCCceEEEEEcCCc--eEEEEEE- Confidence 235578899999999999999999999999999999865 56789999988888776543 3444433 Q ss_pred CCCCceeEEEeeeeeEEeecCCCCc--ccccchHHHHHHHHHHHHHHHHHHHHHHHHccCCcceeeeeCCcC-CHHHHHH Q lcl|Aclame:pro 158 AGVGTQLVSFADDEVVPIRFFNPDG--LERGLSLMESLKSTIFSEDSSRNATAAMWKNAGRPNLVLRHEKRL-SPEAQQR 234 (518) Q Consensus 158 ~~~~~~~~~~~~~~vih~~~~~~~~--~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~p~gil~~~~~~-~~e~~~~ 234 (518) ..++..+.|++++||||+++++++ ..+|+||+..+..++....+++++..++|+||++|+|++++++.+ ++++.++ T Consensus 137 -~~~~~~~~~~~~eiihik~~~~~~~~~~~G~s~i~~~~~~i~~~~~~~~~~~~~~~ng~~~~gil~~~~~~~~~e~~~~ 215 (385) T protein:vir:10 137 -SNDRPQMVLRQDQMLHFRLMPDPQYRYLIGRSPLESLQNALNLDDKASKSNMSAMENQINPAGKLTISNYLSDGKDLES 215 (385) T ss_pred -cCCceEEEEccccEEEeccCCCCcccccccccHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEeCCCCCCHHHHHH Confidence 234567889999999999877643 568999999999999999999999999999999999999999876 5789999 Q ss_pred HHHHHHHHhcCccccccceeccCCcccccccCChhhHHHH-HHHHHHHHHHHHHhccchHhhccc--cccccccHHHHHH Q lcl|Aclame:pro 235 LREQFDRAHAGSSNTGKTMVVEEGMEPIPLQLTAVEMQFI-EARQLNREEVCGVYDIAPPIVHIL--DRATFSNISAQMR 311 (518) Q Consensus 235 ~~~~~~~~~~g~~n~g~~~vl~~g~~~~~~~~~~~d~q~~-e~~~~~~~~Ia~~fgVpp~~lg~~--~~~~~s~~e~~~~ 311 (518) +++.|++.++| .|+|+++++++|++|++++.++.|+|++ |.+++++++||++|||||++||.. ++++++|.|++.. T Consensus 216 ~~~~~~~~~~~-~n~~~~~vl~~g~~~~~l~~~~~d~~~l~e~~~~~~~~Ia~~fgVp~~~lg~~~~~~~~~sn~eq~~~ 294 (385) T protein:vir:10 216 AREEFEKANTG-DNSGRLMVLPDGFDYTQLEMKTDVFKALADNSAYSADQISKAFGVPSDILGGGTSTESQHSNIDQIKA 294 (385) T ss_pred HHHHHHHHhCc-cccCCccccCCCceEEecCCChhHHHHHHHHHHHHHHHHHHHhCCCHHHcCCccCCCcccccHHHHHH Confidence 99999999877 6899999999999999999999999975 999999999999999999999964 4667899887654 Q ss_pred HHHHHHHHHHHHHHHHHHHhhhcchhhccceeeechhhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHHhCCCCCCccCc Q lcl|Aclame:pro 312 AFYRDTMAIPIARIQSAMDKYVGQYWVRKNRMKFDIDDVIQPDWEAKSESTQKMVNSGVATPNEGREIMGLPRSDDPKAD 391 (518) Q Consensus 312 ~~~~~~l~P~~~~ie~~ln~~l~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~T~NE~R~~~g~~pi~~~~gD 391 (518) ++.+||.||++.|+++|+++|++. .++||++.++++|.+++++.+++++++|++|+||+|+.+|++|++.+++| T Consensus 295 -~~~~~l~P~~~~ie~~l~~~l~~~-----~~~f~~~~ll~~d~~~~~~~~~~~~~~G~~T~NE~R~~~g~~p~p~~~~~ 368 (385) T protein:vir:10 295 -TYLANLNSYVNPIVDELRLKMNAP-----DLELDIKDMLDVDDSALINQVSNLAKSGVLGAEQAQFILTRSGFLPDNLP 368 (385) T ss_pred -HHHHHHHHHHHHHHHHHHHhhCCc-----eEEeechhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCccCCCCCc Confidence 556799999999999999999753 48899999999999999999999999999999999999999999977888 Q ss_pred eeeecccccccccccccCCCCCC Q lcl|Aclame:pro 392 ELYANSALQPLGATPDGAVEGEE 414 (518) Q Consensus 392 ~~~~~~n~~~~~~~~~~~~~~~~ 414 (518) ++.++.+.+..+... ++ T Consensus 369 ~~~~~~~~~~~g~~~------dn 385 (385) T protein:vir:10 369 EFKPLTTQVKGGDEG------DN 385 (385) T ss_pred cccCcccccCCCCCC------CC Confidence 887776643211111 10 No 67 >protein:vir:3153 Length: 467 # NCBI annotation: capsid protein # Family: family:all:1379 # ACLAME annotation(s): phi:0000161 - phage head/capsid # MgeID: mge:316 # MgeName: PhiCh1 # Cross-refs: genbank:acc:NP_665924;genbank:gi:22091110;genbank:GeneID:951257 Probab=100.00 E-value=3.8e-78 Score=445.01 Aligned_cols=405 Identities=14% Similarity=0.139 Sum_probs=302.0 Q ss_pred hHHHHhhhHHHHHHHHHHHHhhccCceEEEEecCCce----eeecch-HHHHHhhccCccC--------CHHHHHHHHHH Q lcl|Aclame:pro 42 YGGIYKNQPWVRTVIAKRAQALARLPVKCMFTSGDTE----TEEHDT-GYAKLLADPCEYL--------DPFAFWEWVAS 108 (518) Q Consensus 42 ~~~~~~~~~~v~~~v~~ia~~ia~lp~~v~~~~~~~~----~~~~~~-~~~~l~~~PN~~~--------t~~~f~~~~~~ 108 (518) .++++.+|++|++||++||++||++|++++.+.+... ....++ ....+..+||+.| |+.+||+.++. T Consensus 1 l~~l~~~n~~v~~ci~~ia~~ia~~p~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~pn~~~~~~~~~~~t~~~~~~~~~~ 80 (467) T protein:vir:31 1 MAELLEHNETHAKCVHAKSRYVAGFGINIIPHPEAEDPDRDGEQYERVWDFWFGDDSNWQVGPMESERATATNVLQTAWT 80 (467) T ss_pred ChhhhhcCHHHHHHHHHHHHhhhcCCeEEEEccCcccccchhhhhhhHHHHhhccCCCccccchhhHhhHHHHHHHHHHH Confidence 5677888999999999999999999999986643221 122222 2334556788765 67789999999 Q ss_pred HHHHcCCeeEEeeeCCCCceeeeeeeCCcceEEEeccCcc-------eEEEEe------------------eccCCCCce Q lcl|Aclame:pro 109 TLDIYGETYLAIQKNKSGTPEKLMPMHPSRVAIKRNSRTG-------RYEYYF------------------QAGAGVGTQ 163 (518) Q Consensus 109 ~~ll~G~~~~~i~~~~~G~~~~l~~l~p~~v~~~~~~~~~-------~~~~~~------------------~~~~~~~~~ 163 (518) +++++||+|++++++..|++++|+|++|.+|++..+.... ..+|.+ .......+. T Consensus 81 ~l~l~Gn~~i~~~r~~~G~~~~l~~l~~~~v~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (467) T protein:vir:31 81 DYEAIGWLTIEILTQTDGTPTGLAYVPGHTIRKRMDERGFVQLLEEKEKYFGVAGDRYQTNGNGDLDPVFVDADDGSTGT 160 (467) T ss_pred HHHhcCCeEEEEEECCCCcEEEEEEeCCceeEeeeecceeEeecCCceeeEEeccccceeecccceeeeeeeeccccccc Confidence 9999999999999999999999999999999987764321 111111 111223456 Q ss_pred eEEEeeeeeEEeecCCCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHccCCcceeeeeC-CcCCHHHHHHHHHHHHHH Q lcl|Aclame:pro 164 LVSFADDEVVPIRFFNPDGLERGLSLMESLKSTIFSEDSSRNATAAMWKNAGRPNLVLRHE-KRLSPEAQQRLREQFDRA 242 (518) Q Consensus 164 ~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~p~gil~~~-~~~~~e~~~~~~~~~~~~ 242 (518) .+.+++++|||++.+++.+..||+||+..+..++..+.++++++.++|+||++|+|+|+++ ..+++++.+++++.|++. T Consensus 161 ~~~~~~~diih~r~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~f~ng~~p~gil~~~~~~l~~e~~~~~~~~~~~~ 240 (467) T protein:vir:31 161 SVSNPANELIFKRNHSPLYPHYGAPDIIPAVKTIRGDSAAQDYNIDFFENDGVPRIAIIVKGAELTEKGREEMRNLIEDN 240 (467) T ss_pred eeEeccccEEEecCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEecCcCCCHHHHHHHHHHHHhh Confidence 7789999999999999888899999999999999999999999999999999999999986 468999999999999987 Q ss_pred hc-----------CccccccceeccCCccccccc--------CChhhHHHHHHHHHHHHHHHHHhccchHhhcccccccc Q lcl|Aclame:pro 243 HA-----------GSSNTGKTMVVEEGMEPIPLQ--------LTAVEMQFIEARQLNREEVCGVYDIAPPIVHILDRATF 303 (518) Q Consensus 243 ~~-----------g~~n~g~~~vl~~g~~~~~~~--------~~~~d~q~~e~~~~~~~~Ia~~fgVpp~~lg~~~~~~~ 303 (518) +. |..|+++++++++|+++++++ .++.|+||++++++++++||++|||||.+||+.+++++ T Consensus 241 ~~~~~~~~~~~~~g~~n~~~~~~l~~g~~~~~~~~~~~~ls~~~~~d~qf~e~~~~~~~~Ia~~fgVpp~~lG~~~~~~~ 320 (467) T protein:vir:31 241 NEDNHRTAFIETEKIVQNEDYLNLADGADRSDVEIRLEPLTVGIDEEASFLEFRGRNEHDILKVHDVPPVIAGVVESGAF 320 (467) T ss_pred hcchhhhhhhhhcccccccccccccCCCcccccceeEEeccccChhhHHHHHHHHHHHHHHHHHhCCCHHHcccCCCCCc Confidence 76 556889999999887766654 36789999999999999999999999999998876665 Q ss_pred -ccHHHHHHHHHHHHHHHHHHHHHHHHHhhhcchhh--ccceeeechhhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHH Q lcl|Aclame:pro 304 -SNISAQMRAFYRDTMAIPIARIQSAMDKYVGQYWV--RKNRMKFDIDDVIQPDWEAKSESTQKMVNSGVATPNEGREIM 380 (518) Q Consensus 304 -s~~e~~~~~~~~~~l~P~~~~ie~~ln~~l~~~~~--~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~T~NE~R~~~ 380 (518) ++++++...|+++||+|+++.|+++||++|++... .+++++|+++.+++.|.+++++.++.++++|++|+||+|+++ T Consensus 321 ~s~~e~~~~~f~~~~l~P~~~~ie~~ln~~l~~~~~~~~~~~i~f~~~~l~~~d~~~~~~~~~~~~~~G~~T~NE~R~~~ 400 (467) T protein:vir:31 321 STDAEEQRKEFAEETIQPKQHDFGELLYELVHKQGLDAPDWTIEFELAKPDTKLQDVEIASQRVQAMQGLLTVNELRDEF 400 (467) T ss_pred ccCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhhccCCceEEEecchhhccCHHHHHHHHHHHHhCCCcCHHHHHHHh Confidence 68999999999999999999999999999998654 457899999999999999999999999999999999999999 Q ss_pred hCCCCCCccCceeeecccccccccccccCCCCCCCCCCCCcccCCCCCc-cCCccccccccChhhhcchhHH Q lcl|Aclame:pro 381 GLPRSDDPKADELYANSALQPLGATPDGAVEGEEAPAPKRPASTPVASL-DQSPPASVPGLSPTNSDRSTDS 451 (518) Q Consensus 381 g~~pi~~~~gD~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 451 (518) |++|+++ ..+.+....... ...+....+.......+...+..+. .+...++.......+-+...+. T Consensus 401 Gl~pi~d----~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 467 (467) T protein:vir:31 401 GFEPFPE----EHVYGGETLVAE-VTGGSGPGGGIGDQIEQLVEDRADEIIDSYQADLETEQLIEIGANADS 467 (467) T ss_pred CCCCCCc----ccccCCcccccc-cccccCCCCcccCcCCCCCCCcccchHhhhhhccccchhhhhccccCC Confidence 9999852 233332221111 1111111100000000000000000 0000011111111111111111 No 68 >protein:vir:95965 Length: 385 # NCBI annotation: ORF011 # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:1594 # MgeName: 2638A # Cross-refs: genbank:acc:YP_239800;genbank:gi:66395461;genbank:GeneID:5132882 Probab=100.00 E-value=6.1e-78 Score=443.89 Aligned_cols=370 Identities=16% Similarity=0.132 Sum_probs=296.2 Q ss_pred CCCCCCCCCccccccccchhhhhhhccCccCCcccCccchhhHHHHhhhHHHHHHHHHHHHhhccCceEEEEecCCceee Q lcl|Aclame:pro 1 MLLANGQTLSAPAMAELSPQMQDSYYYAPAVGMQLERQFSLYGGIYKNQPWVRTVIAKRAQALARLPVKCMFTSGDTETE 80 (518) Q Consensus 1 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~v~~ia~~ia~lp~~v~~~~~~~~~~ 80 (518) -+|+++.+.... + .......++...|+++++|++||++||++||++|+++++++. + T Consensus 6 ~~f~~~~~~~~~-------~-------------~~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~p~~~~~~~~----~ 61 (385) T protein:vir:95 6 SVFKRHSELSWM-------Y-------------DLEFLQDKSKKAYLKQIALNTVVEMVARTISQSEFRVMKNNT----K 61 (385) T ss_pred hhhccCcccccc-------c-------------chhhhhccchhhhhhhHHHHHHHHHHHHHHcccceeeeecCc----c Confidence 445443321110 0 000112334567899999999999999999999999998543 3 Q ss_pred ecchHHHHHhhccCccCCHHHHHHHHHHHHHHcCCeeEEeeeCCCCceeeeeeeCCcceEEEeccCcceEEEEeeccCCC Q lcl|Aclame:pro 81 EHDTGYAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQKNKSGTPEKLMPMHPSRVAIKRNSRTGRYEYYFQAGAGV 160 (518) Q Consensus 81 ~~~~~~~~l~~~PN~~~t~~~f~~~~~~~~ll~G~~~~~i~~~~~G~~~~l~~l~p~~v~~~~~~~~~~~~~~~~~~~~~ 160 (518) ..|+..++|+.+||++||+++||+.++.+++++||+|+++.++. +.+..++++.+..+...... ++.+... . T Consensus 62 ~~~~l~~lL~~~PN~~~t~~~f~~~~~~~l~l~Gna~i~~~~~~-~~~~~~~~~~~~~~~~~~~~-----~~~~~~~--~ 133 (385) T protein:vir:95 62 EKGTLYYLLNVRPNRNQNAVDFWQKFIFKLIMDNEVLVVKNDEG-HFFVADDFEKEDELGLYSHR-----FTNVLVN--D 133 (385) T ss_pred ccchHHHHHhcccCcCCCHHHHHHHHHHHHhhcCceEEEEecCC-Ceeecccccccccccccccc-----ceeeeec--c Confidence 45667777778999999999999999999999999999876553 45556666666655543322 2222221 1 Q ss_pred CceeEEEeeeeeEEeecCCCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHccCCcceeeeeCC--cCCHHHHHHHHHH Q lcl|Aclame:pro 161 GTQLVSFADDEVVPIRFFNPDGLERGLSLMESLKSTIFSEDSSRNATAAMWKNAGRPNLVLRHEK--RLSPEAQQRLREQ 238 (518) Q Consensus 161 ~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~p~gil~~~~--~~~~e~~~~~~~~ 238 (518) .+....+++++|||++++++++..+|.||+..+...+....++.. +++.|+|+++++. .+++++.+++++. T Consensus 134 ~~~~~~~~~~eiih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~-------~~~~~~g~l~~~~~~~~~~e~~~~~~~~ 206 (385) T protein:vir:95 134 FEFKRVFTMDDVIYLKYNNQKLDAFSLGLFEDYGEIFGRMIDLQM-------LNNQIRGILKVDATKFYNKEKQKELQAY 206 (385) T ss_pred cceeeeeccccEEEecCCCCCcccccchHHHHHHHHHHHHHHHHH-------hcCCCceEEEeCCccCCCHHHHHHHHHH Confidence 233467999999999999998888999999999998876655432 2345788888764 5789999999999 Q ss_pred HHHHhcCccc-cccceeccCCcccccccC------ChhhHHHHHHHHHHHHHHHHHhccchHhhccccccccccHHHHHH Q lcl|Aclame:pro 239 FDRAHAGSSN-TGKTMVVEEGMEPIPLQL------TAVEMQFIEARQLNREEVCGVYDIAPPIVHILDRATFSNISAQMR 311 (518) Q Consensus 239 ~~~~~~g~~n-~g~~~vl~~g~~~~~~~~------~~~d~q~~e~~~~~~~~Ia~~fgVpp~~lg~~~~~~~s~~e~~~~ 311 (518) |++.++|..+ .++++++++|++|+++++ ++.|+||+|.+++++.+||++|||||++|+ ++++|.+++.. T Consensus 207 ~~~~~~g~~~~~~~i~~l~~g~~~~~l~~~~~~~~s~~d~~~~e~~~~~~~~Ia~~fgVpp~~l~----~~~sn~e~~~~ 282 (385) T protein:vir:95 207 IDTLFDAFQNNTIAVVPLTEGLAYEEHSNRGAAQSAQQFSELNELKKTVLTDVARMIGVPPSLVL----GEMADLEKTIE 282 (385) T ss_pred HHHHhhhhhhcCCceEEcCCCceeEeecccccccCCHHHHHHHHHHHHHHHHHHHHhCCCHHHhc----CCCcCHHHHHH Confidence 9999998755 445788999999999874 667999999999999999999999999995 57899999999 Q ss_pred HHHHHHHHHHHHHHHHHHHhhhcchhhc-cceeeechhhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHHhCCCCCCccC Q lcl|Aclame:pro 312 AFYRDTMAIPIARIQSAMDKYVGQYWVR-KNRMKFDIDDVIQPDWEAKSESTQKMVNSGVATPNEGREIMGLPRSDDPKA 390 (518) Q Consensus 312 ~~~~~~l~P~~~~ie~~ln~~l~~~~~~-~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~T~NE~R~~~g~~pi~~~~g 390 (518) .|+++||+|++.+||++||++|++..++ ..+++||++.+++.|.+++++.+.+++++|+||+||+|+++|++|+++||| T Consensus 283 ~~~~~~l~P~~~~ie~~l~~~L~~~~~~~~~~~~fd~~~l~~~D~~~~~~~~~~~~~~g~lt~NE~R~~~g~~p~~~~~g 362 (385) T protein:vir:95 283 SYLQFCINPLLRKIEAELNSKFFYQDEYLNDDMHIKVVGIDKRDPLKLSEAIDKLVASGTFTRNQVRIMTGEEPADDPEL 362 (385) T ss_pred HHHHHHHHHHHHHHHHHHHhhcCChhhcccceEEEechhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCC Confidence 9999999999999999999999987653 457899999999999999999999999999999999999999999999999 Q ss_pred ceeeecccccccccccccCCCCC Q lcl|Aclame:pro 391 DELYANSALQPLGATPDGAVEGE 413 (518) Q Consensus 391 D~~~~~~n~~~~~~~~~~~~~~~ 413 (518) |++++|+|+++++...++...++ T Consensus 363 d~~~~~~n~~~~~~~kgge~~~e 385 (385) T protein:vir:95 363 DKFIITKNLQSADAFKGGESNEE 385 (385) T ss_pred ceeeecccceecccccCCCCCCC Confidence 99999999999876533322222 No 69 >protein:vir:101289 Length: 395 # NCBI annotation: phage portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:1591 # MgeName: phiNM3 # Cross-refs: genbank:acc:YP_908829;genbank:gi:118725093;genbank:GeneID:4555860 Probab=100.00 E-value=3e-77 Score=440.10 Aligned_cols=382 Identities=16% Similarity=0.118 Sum_probs=297.9 Q ss_pred CCCCCCCCCccccccccchhhhhhhccCccCCcccCccchhhHHHHhhhHHHHHHHHHHHHhhccCceEEEEecCCceee Q lcl|Aclame:pro 1 MLLANGQTLSAPAMAELSPQMQDSYYYAPAVGMQLERQFSLYGGIYKNQPWVRTVIAKRAQALARLPVKCMFTSGDTETE 80 (518) Q Consensus 1 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~v~~ia~~ia~lp~~v~~~~~~~~~~ 80 (518) -+|++++.... + ..+ .....++...|+++++|++||++||++||++|+++++++ .. T Consensus 6 ~lf~~~~~~~~--------~------~~~------~~~~~v~~~~~~~~~~v~~~i~~Ia~~iA~~p~~~~~~~----~~ 61 (395) T protein:vir:10 6 KIFKTRKDITY--------M------LDL------DMIEDLSQQAYVKRLAIDSCIEFVARAVAQSHFKVLEGN----RI 61 (395) T ss_pred hhhccCccccc--------c------ccc------hhccccchhhhhhhHHHHHHHHHHHHhhccceeEeccCC----cc Confidence 45555432110 0 000 111234456788999999999999999999999999743 34 Q ss_pred ecchHHHHHhhccCccCCHHHHHHHHHHHHHHcCCeeEEeeeCCCCceeeeeeeCCcceEEEeccCcceEEEEeeccCCC Q lcl|Aclame:pro 81 EHDTGYAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQKNKSGTPEKLMPMHPSRVAIKRNSRTGRYEYYFQAGAGV 160 (518) Q Consensus 81 ~~~~~~~~l~~~PN~~~t~~~f~~~~~~~~ll~G~~~~~i~~~~~G~~~~l~~l~p~~v~~~~~~~~~~~~~~~~~~~~~ 160 (518) ..++.+++|+.+||++||+++||+.++.++++.|++|+++.++ . .++++++..+.+....+... +.+... . T Consensus 62 ~~~~~~~ll~~~PN~~~t~~~f~~~~~~~lll~g~~~~~~~~~-~----~~~~~~~~~~~~~~~~~~~~--~~~~~~--~ 132 (395) T protein:vir:10 62 QKNDVYYKLNIKPNTDLSSDSFWQQVIYKLIYDNEVLIVVSDS-K----ELLIADSFYREEYALYDDIF--KDVTVK--D 132 (395) T ss_pred ccchHHHHHHhccCcCCCHHHHHHHHHHHHhhCCceEEEEecC-C----CeEecCCccceeEeecCcce--eEEEEc--C Confidence 5677888888999999999999999999999999999876543 2 25666665555544333222 222222 2 Q ss_pred CceeEEEeeeeeEEeecCCCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHccCCcceeeeeCCc-CCHHHHHHHHHHH Q lcl|Aclame:pro 161 GTQLVSFADDEVVPIRFFNPDGLERGLSLMESLKSTIFSEDSSRNATAAMWKNAGRPNLVLRHEKR-LSPEAQQRLREQF 239 (518) Q Consensus 161 ~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~p~gil~~~~~-~~~e~~~~~~~~~ 239 (518) .+....+++++|||++++++.+..+|+||+..+...+.... +.|.+|+.++|+|.++.. +++++.+++++.| T Consensus 133 ~~~~~~~~~~evih~~~~~~~~~~~G~spi~~~~~~~~~~~-------~~~~~~~~~~gii~~~~~~~~~e~~~~~~~~~ 205 (395) T protein:vir:10 133 YTYQRTFTMQEVIYLKYNNNKVTHFVESLFEDYGKIFGRMI-------GAQLKNYQIRGILKSASSAYDEKNIEKLQAFT 205 (395) T ss_pred ceeeeeeccccEEEEccCCCCcccccchHHHHHHHHHHHHH-------HHHHhcCCCceEEEeCCCCCCHHHHHHHHHHH Confidence 23456799999999999999888999999999988776544 457788899999988765 6899999999999 Q ss_pred HHHhcCcccccc--ceeccCCcccccccCChhhH-----HHHHHHHHHHHHHHHHhccchHhhccccccccccHHHHHHH Q lcl|Aclame:pro 240 DRAHAGSSNTGK--TMVVEEGMEPIPLQLTAVEM-----QFIEARQLNREEVCGVYDIAPPIVHILDRATFSNISAQMRA 312 (518) Q Consensus 240 ~~~~~g~~n~g~--~~vl~~g~~~~~~~~~~~d~-----q~~e~~~~~~~~Ia~~fgVpp~~lg~~~~~~~s~~e~~~~~ 312 (518) ++.+++.+ +++ ++++++|++|++++.++.++ ||+|++++++++||++|||||++|| ++++|.+++.+. T Consensus 206 ~~~~~~~~-~~~~~v~~l~~g~~~~~l~~~~~~~~~~~~q~~e~~~~~~~~Ia~~f~VPp~~l~----~~~sn~e~~~~~ 280 (395) T protein:vir:10 206 NKLFNTFN-KNQLAIAPLIEGFDYEELSNGGKNSNMPFSELSELMRDAIKNVALMIGIPPGLIY----GETADLEKNTLV 280 (395) T ss_pred HHHhcccc-ccCcceEEcCCCceeeeccccccccchhHHHHHHHHHHHHHHHHHHhCCCHHHhc----CcccCHHHHHHH Confidence 99888754 444 45579999999999888765 8999999999999999999999996 478899999999 Q ss_pred HHHHHHHHHHHHHHHHHHhhhcchhhccceeeechhhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHHhCCCCCCccCce Q lcl|Aclame:pro 313 FYRDTMAIPIARIQSAMDKYVGQYWVRKNRMKFDIDDVIQPDWEAKSESTQKMVNSGVATPNEGREIMGLPRSDDPKADE 392 (518) Q Consensus 313 ~~~~~l~P~~~~ie~~ln~~l~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~T~NE~R~~~g~~pi~~~~gD~ 392 (518) |+++||.|++.+||++||++|++...+..+++|+++.+++.|.+++++++.+++++|++|+||+|+++|+||+++++||+ T Consensus 281 ~~~~~l~P~~~~ie~~l~~kL~~~~~~~~~~~f~~~~l~~~D~~~~~~~~~~~~~~G~lt~NE~R~~~g~~p~~~g~~d~ 360 (395) T protein:vir:10 281 FEKFCLTPLLKKIQNELNAKLITQSMYLKDTRIEIVGVNKKDPLQYAEAIDKLVSSGSFTRNEVRIMLGEEPSDNPELDE 360 (395) T ss_pred HHHHHHHHHHHHHHHHHHHhhcChhhhcccceecchhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCCce Confidence 99999999999999999999998877777789999999999999999999999999999999999999999999888999 Q ss_pred eeecccccccccccccCCCCCCCCCCCCcccCCCCCccCCcc Q lcl|Aclame:pro 393 LYANSALQPLGATPDGAVEGEEAPAPKRPASTPVASLDQSPP 434 (518) Q Consensus 393 ~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 434 (518) +++|+|+++++........++.... ..++.+++.+ T Consensus 361 ~~~~~n~~~~~~~~~~~~~~~~~~~-------kgg~~~~~g~ 395 (395) T protein:vir:10 361 YLITKNYEKANSGENDEKEKDENTL-------KGGDEDESGD 395 (395) T ss_pred eeeccccccccccccccCccccccc-------CCCCCCCCCC Confidence 9999999998765444322221110 0111111100 No 70 >protein:vir:9507 Length: 395 # NCBI annotation: hypothetical protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:170 # MgeName: phiN315 # Cross-refs: genbank:acc:NP_835554;genbank:gi:30043953;genbank:GeneID:1260535 Probab=100.00 E-value=3e-77 Score=440.10 Aligned_cols=382 Identities=16% Similarity=0.118 Sum_probs=297.9 Q ss_pred CCCCCCCCCccccccccchhhhhhhccCccCCcccCccchhhHHHHhhhHHHHHHHHHHHHhhccCceEEEEecCCceee Q lcl|Aclame:pro 1 MLLANGQTLSAPAMAELSPQMQDSYYYAPAVGMQLERQFSLYGGIYKNQPWVRTVIAKRAQALARLPVKCMFTSGDTETE 80 (518) Q Consensus 1 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~v~~ia~~ia~lp~~v~~~~~~~~~~ 80 (518) -+|++++.... + ..+ .....++...|+++++|++||++||++||++|+++++++ .. T Consensus 6 ~lf~~~~~~~~--------~------~~~------~~~~~v~~~~~~~~~~v~~~i~~Ia~~iA~~p~~~~~~~----~~ 61 (395) T protein:vir:95 6 KIFKTRKDITY--------M------LDL------DMIEDLSQQAYVKRLAIDSCIEFVARAVAQSHFKVLEGN----RI 61 (395) T ss_pred hhhccCccccc--------c------ccc------hhccccchhhhhhhHHHHHHHHHHHHhhccceeEeccCC----cc Confidence 45555432110 0 000 111234456788999999999999999999999999743 34 Q ss_pred ecchHHHHHhhccCccCCHHHHHHHHHHHHHHcCCeeEEeeeCCCCceeeeeeeCCcceEEEeccCcceEEEEeeccCCC Q lcl|Aclame:pro 81 EHDTGYAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQKNKSGTPEKLMPMHPSRVAIKRNSRTGRYEYYFQAGAGV 160 (518) Q Consensus 81 ~~~~~~~~l~~~PN~~~t~~~f~~~~~~~~ll~G~~~~~i~~~~~G~~~~l~~l~p~~v~~~~~~~~~~~~~~~~~~~~~ 160 (518) ..++.+++|+.+||++||+++||+.++.++++.|++|+++.++ . .++++++..+.+....+... +.+... . T Consensus 62 ~~~~~~~ll~~~PN~~~t~~~f~~~~~~~lll~g~~~~~~~~~-~----~~~~~~~~~~~~~~~~~~~~--~~~~~~--~ 132 (395) T protein:vir:95 62 QKNDVYYKLNIKPNTDLSSDSFWQQVIYKLIYDNEVLIVVSDS-K----ELLIADSFYREEYALYDDIF--KDVTVK--D 132 (395) T ss_pred ccchHHHHHHhccCcCCCHHHHHHHHHHHHhhCCceEEEEecC-C----CeEecCCccceeEeecCcce--eEEEEc--C Confidence 5677888888999999999999999999999999999876543 2 25666665555544333222 222222 2 Q ss_pred CceeEEEeeeeeEEeecCCCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHccCCcceeeeeCCc-CCHHHHHHHHHHH Q lcl|Aclame:pro 161 GTQLVSFADDEVVPIRFFNPDGLERGLSLMESLKSTIFSEDSSRNATAAMWKNAGRPNLVLRHEKR-LSPEAQQRLREQF 239 (518) Q Consensus 161 ~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~p~gil~~~~~-~~~e~~~~~~~~~ 239 (518) .+....+++++|||++++++.+..+|+||+..+...+.... +.|.+|+.++|+|.++.. +++++.+++++.| T Consensus 133 ~~~~~~~~~~evih~~~~~~~~~~~G~spi~~~~~~~~~~~-------~~~~~~~~~~gii~~~~~~~~~e~~~~~~~~~ 205 (395) T protein:vir:95 133 YTYQRTFTMQEVIYLKYNNNKVTHFVESLFEDYGKIFGRMI-------GAQLKNYQIRGILKSASSAYDEKNIEKLQAFT 205 (395) T ss_pred ceeeeeeccccEEEEccCCCCcccccchHHHHHHHHHHHHH-------HHHHhcCCCceEEEeCCCCCCHHHHHHHHHHH Confidence 23456799999999999999888999999999988776544 457788899999988765 6899999999999 Q ss_pred HHHhcCcccccc--ceeccCCcccccccCChhhH-----HHHHHHHHHHHHHHHHhccchHhhccccccccccHHHHHHH Q lcl|Aclame:pro 240 DRAHAGSSNTGK--TMVVEEGMEPIPLQLTAVEM-----QFIEARQLNREEVCGVYDIAPPIVHILDRATFSNISAQMRA 312 (518) Q Consensus 240 ~~~~~g~~n~g~--~~vl~~g~~~~~~~~~~~d~-----q~~e~~~~~~~~Ia~~fgVpp~~lg~~~~~~~s~~e~~~~~ 312 (518) ++.+++.+ +++ ++++++|++|++++.++.++ ||+|++++++++||++|||||++|| ++++|.+++.+. T Consensus 206 ~~~~~~~~-~~~~~v~~l~~g~~~~~l~~~~~~~~~~~~q~~e~~~~~~~~Ia~~f~VPp~~l~----~~~sn~e~~~~~ 280 (395) T protein:vir:95 206 NKLFNTFN-KNQLAIAPLIEGFDYEELSNGGKNSNMPFSELSELMRDAIKNVALMIGIPPGLIY----GETADLEKNTLV 280 (395) T ss_pred HHHhcccc-ccCcceEEcCCCceeeeccccccccchhHHHHHHHHHHHHHHHHHHhCCCHHHhc----CcccCHHHHHHH Confidence 99888754 444 45579999999999888765 8999999999999999999999996 478899999999 Q ss_pred HHHHHHHHHHHHHHHHHHhhhcchhhccceeeechhhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHHhCCCCCCccCce Q lcl|Aclame:pro 313 FYRDTMAIPIARIQSAMDKYVGQYWVRKNRMKFDIDDVIQPDWEAKSESTQKMVNSGVATPNEGREIMGLPRSDDPKADE 392 (518) Q Consensus 313 ~~~~~l~P~~~~ie~~ln~~l~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~T~NE~R~~~g~~pi~~~~gD~ 392 (518) |+++||.|++.+||++||++|++...+..+++|+++.+++.|.+++++++.+++++|++|+||+|+++|+||+++++||+ T Consensus 281 ~~~~~l~P~~~~ie~~l~~kL~~~~~~~~~~~f~~~~l~~~D~~~~~~~~~~~~~~G~lt~NE~R~~~g~~p~~~g~~d~ 360 (395) T protein:vir:95 281 FEKFCLTPLLKKIQNELNAKLITQSMYLKDTRIEIVGVNKKDPLQYAEAIDKLVSSGSFTRNEVRIMLGEEPSDNPELDE 360 (395) T ss_pred HHHHHHHHHHHHHHHHHHHhhcChhhhcccceecchhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCCce Confidence 99999999999999999999998877777789999999999999999999999999999999999999999999888999 Q ss_pred eeecccccccccccccCCCCCCCCCCCCcccCCCCCccCCcc Q lcl|Aclame:pro 393 LYANSALQPLGATPDGAVEGEEAPAPKRPASTPVASLDQSPP 434 (518) Q Consensus 393 ~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 434 (518) +++|+|+++++........++.... ..++.+++.+ T Consensus 361 ~~~~~n~~~~~~~~~~~~~~~~~~~-------kgg~~~~~g~ 395 (395) T protein:vir:95 361 YLITKNYEKANSGENDEKEKDENTL-------KGGDEDESGD 395 (395) T ss_pred eeeccccccccccccccCccccccc-------CCCCCCCCCC Confidence 9999999998765444322221110 0111111100 No 71 >protein:vir:100650 Length: 395 # NCBI annotation: 77ORF008 # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:1476 # MgeName: 77 # Cross-refs: genbank:acc:NP_958604;genbank:gi:41189523;genbank:GeneID:2743796 Probab=100.00 E-value=3e-77 Score=440.10 Aligned_cols=382 Identities=16% Similarity=0.118 Sum_probs=297.9 Q ss_pred CCCCCCCCCccccccccchhhhhhhccCccCCcccCccchhhHHHHhhhHHHHHHHHHHHHhhccCceEEEEecCCceee Q lcl|Aclame:pro 1 MLLANGQTLSAPAMAELSPQMQDSYYYAPAVGMQLERQFSLYGGIYKNQPWVRTVIAKRAQALARLPVKCMFTSGDTETE 80 (518) Q Consensus 1 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~v~~ia~~ia~lp~~v~~~~~~~~~~ 80 (518) -+|++++.... + ..+ .....++...|+++++|++||++||++||++|+++++++ .. T Consensus 6 ~lf~~~~~~~~--------~------~~~------~~~~~v~~~~~~~~~~v~~~i~~Ia~~iA~~p~~~~~~~----~~ 61 (395) T protein:vir:10 6 KIFKTRKDITY--------M------LDL------DMIEDLSQQAYVKRLAIDSCIEFVARAVAQSHFKVLEGN----RI 61 (395) T ss_pred hhhccCccccc--------c------ccc------hhccccchhhhhhhHHHHHHHHHHHHhhccceeEeccCC----cc Confidence 45555432110 0 000 111234456788999999999999999999999999743 34 Q ss_pred ecchHHHHHhhccCccCCHHHHHHHHHHHHHHcCCeeEEeeeCCCCceeeeeeeCCcceEEEeccCcceEEEEeeccCCC Q lcl|Aclame:pro 81 EHDTGYAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQKNKSGTPEKLMPMHPSRVAIKRNSRTGRYEYYFQAGAGV 160 (518) Q Consensus 81 ~~~~~~~~l~~~PN~~~t~~~f~~~~~~~~ll~G~~~~~i~~~~~G~~~~l~~l~p~~v~~~~~~~~~~~~~~~~~~~~~ 160 (518) ..++.+++|+.+||++||+++||+.++.++++.|++|+++.++ . .++++++..+.+....+... +.+... . T Consensus 62 ~~~~~~~ll~~~PN~~~t~~~f~~~~~~~lll~g~~~~~~~~~-~----~~~~~~~~~~~~~~~~~~~~--~~~~~~--~ 132 (395) T protein:vir:10 62 QKNDVYYKLNIKPNTDLSSDSFWQQVIYKLIYDNEVLIVVSDS-K----ELLIADSFYREEYALYDDIF--KDVTVK--D 132 (395) T ss_pred ccchHHHHHHhccCcCCCHHHHHHHHHHHHhhCCceEEEEecC-C----CeEecCCccceeEeecCcce--eEEEEc--C Confidence 5677888888999999999999999999999999999876543 2 25666665555544333222 222222 2 Q ss_pred CceeEEEeeeeeEEeecCCCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHccCCcceeeeeCCc-CCHHHHHHHHHHH Q lcl|Aclame:pro 161 GTQLVSFADDEVVPIRFFNPDGLERGLSLMESLKSTIFSEDSSRNATAAMWKNAGRPNLVLRHEKR-LSPEAQQRLREQF 239 (518) Q Consensus 161 ~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~p~gil~~~~~-~~~e~~~~~~~~~ 239 (518) .+....+++++|||++++++.+..+|+||+..+...+.... +.|.+|+.++|+|.++.. +++++.+++++.| T Consensus 133 ~~~~~~~~~~evih~~~~~~~~~~~G~spi~~~~~~~~~~~-------~~~~~~~~~~gii~~~~~~~~~e~~~~~~~~~ 205 (395) T protein:vir:10 133 YTYQRTFTMQEVIYLKYNNNKVTHFVESLFEDYGKIFGRMI-------GAQLKNYQIRGILKSASSAYDEKNIEKLQAFT 205 (395) T ss_pred ceeeeeeccccEEEEccCCCCcccccchHHHHHHHHHHHHH-------HHHHhcCCCceEEEeCCCCCCHHHHHHHHHHH Confidence 23456799999999999999888999999999988776544 457788899999988765 6899999999999 Q ss_pred HHHhcCcccccc--ceeccCCcccccccCChhhH-----HHHHHHHHHHHHHHHHhccchHhhccccccccccHHHHHHH Q lcl|Aclame:pro 240 DRAHAGSSNTGK--TMVVEEGMEPIPLQLTAVEM-----QFIEARQLNREEVCGVYDIAPPIVHILDRATFSNISAQMRA 312 (518) Q Consensus 240 ~~~~~g~~n~g~--~~vl~~g~~~~~~~~~~~d~-----q~~e~~~~~~~~Ia~~fgVpp~~lg~~~~~~~s~~e~~~~~ 312 (518) ++.+++.+ +++ ++++++|++|++++.++.++ ||+|++++++++||++|||||++|| ++++|.+++.+. T Consensus 206 ~~~~~~~~-~~~~~v~~l~~g~~~~~l~~~~~~~~~~~~q~~e~~~~~~~~Ia~~f~VPp~~l~----~~~sn~e~~~~~ 280 (395) T protein:vir:10 206 NKLFNTFN-KNQLAIAPLIEGFDYEELSNGGKNSNMPFSELSELMRDAIKNVALMIGIPPGLIY----GETADLEKNTLV 280 (395) T ss_pred HHHhcccc-ccCcceEEcCCCceeeeccccccccchhHHHHHHHHHHHHHHHHHHhCCCHHHhc----CcccCHHHHHHH Confidence 99888754 444 45579999999999888765 8999999999999999999999996 478899999999 Q ss_pred HHHHHHHHHHHHHHHHHHhhhcchhhccceeeechhhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHHhCCCCCCccCce Q lcl|Aclame:pro 313 FYRDTMAIPIARIQSAMDKYVGQYWVRKNRMKFDIDDVIQPDWEAKSESTQKMVNSGVATPNEGREIMGLPRSDDPKADE 392 (518) Q Consensus 313 ~~~~~l~P~~~~ie~~ln~~l~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~T~NE~R~~~g~~pi~~~~gD~ 392 (518) |+++||.|++.+||++||++|++...+..+++|+++.+++.|.+++++++.+++++|++|+||+|+++|+||+++++||+ T Consensus 281 ~~~~~l~P~~~~ie~~l~~kL~~~~~~~~~~~f~~~~l~~~D~~~~~~~~~~~~~~G~lt~NE~R~~~g~~p~~~g~~d~ 360 (395) T protein:vir:10 281 FEKFCLTPLLKKIQNELNAKLITQSMYLKDTRIEIVGVNKKDPLQYAEAIDKLVSSGSFTRNEVRIMLGEEPSDNPELDE 360 (395) T ss_pred HHHHHHHHHHHHHHHHHHHhhcChhhhcccceecchhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCCce Confidence 99999999999999999999998877777789999999999999999999999999999999999999999999888999 Q ss_pred eeecccccccccccccCCCCCCCCCCCCcccCCCCCccCCcc Q lcl|Aclame:pro 393 LYANSALQPLGATPDGAVEGEEAPAPKRPASTPVASLDQSPP 434 (518) Q Consensus 393 ~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 434 (518) +++|+|+++++........++.... ..++.+++.+ T Consensus 361 ~~~~~n~~~~~~~~~~~~~~~~~~~-------kgg~~~~~g~ 395 (395) T protein:vir:10 361 YLITKNYEKANSGENDEKEKDENTL-------KGGDEDESGD 395 (395) T ss_pred eeeccccccccccccccCccccccc-------CCCCCCCCCC Confidence 9999999998765444322221110 0111111100 No 72 >protein:vir:4995 Length: 384 # NCBI annotation: putative portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:109 # MgeName: Sfi21 # Cross-refs: genbank:acc:NP_049969;genbank:gi:9632941;genbank:GeneID:1262104 Probab=100.00 E-value=1.7e-77 Score=441.49 Aligned_cols=372 Identities=13% Similarity=0.111 Sum_probs=314.1 Q ss_pred CCCCCCCC-Cccccccccchhh---hhhhccCccCCcccCccchhhHHHHhhhHHHHHHHHHHHHhhccCceEEEEecCC Q lcl|Aclame:pro 1 MLLANGQT-LSAPAMAELSPQM---QDSYYYAPAVGMQLERQFSLYGGIYKNQPWVRTVIAKRAQALARLPVKCMFTSGD 76 (518) Q Consensus 1 ~~f~~~~~-~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~v~~ia~~ia~lp~~v~~~~~~ 76 (518) =+|.+... ...+.. ..+.++ ...+.+.+.. ...++.+.++++++|++||++||++||++|++++++.. T Consensus 2 glf~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~------~~~v~~~~al~~~~V~~~i~~Ia~~ia~l~~~~~~~~~- 73 (384) T protein:vir:49 2 PIFNITNLATESPPS-NQDSFFDITDPEFLDALNG------SEWVSAETALKNSDLFSIISQLSNDLATAKITTSRKQL- 73 (384) T ss_pred ccccccccCcccccc-cchhhccccchhhcccccC------CceechhhhhccHHHHHHHHHHHHHHhhCceeeecchh- Confidence 34544322 222211 111121 1111111222 23345567889999999999999999999999986542 Q ss_pred ceeeecchHHHHHhhccCccCCHHHHHHHHHHHHHHcCCeeEEeeeCCCCceeeeeeeCCcceEEEeccCcceEEEEeec Q lcl|Aclame:pro 77 TETEEHDTGYAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQKNKSGTPEKLMPMHPSRVAIKRNSRTGRYEYYFQA 156 (518) Q Consensus 77 ~~~~~~~~~~~~l~~~PN~~~t~~~f~~~~~~~~ll~G~~~~~i~~~~~G~~~~l~~l~p~~v~~~~~~~~~~~~~~~~~ 156 (518) ..|+.+||++||+++|++.++.+++++||+|++++++..|++++|+|++|++|++..+.+++.++|.+.. T Consensus 74 ----------~~l~~~PN~~~t~~~f~~~l~~~lll~Gna~~~i~r~~~g~~~~L~~l~~~~v~v~~~~~~~~~~y~~~~ 143 (384) T protein:vir:49 74 ----------QGIVDNPSNNANRFNFYQSIFAQMLLGGEAFAYRWRNENGRDMKWEYLRPSQVSFNRLDNQNGLYYNITF 143 (384) T ss_pred ----------hhhhhccCCCCCHHHHHHHHHHHhhhcCCeEEEEEECCCCcEEEEEEEcCceeEEEEcCCCceEEEEEEe Confidence 3588999999999999999999999999999999999999999999999999999998888999999988 Q ss_pred cCCCCceeEEEeeeeeEEeecCCCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHccCCcceeeeeCCcCCHHHHHHHH Q lcl|Aclame:pro 157 GAGVGTQLVSFADDEVVPIRFFNPDGLERGLSLMESLKSTIFSEDSSRNATAAMWKNAGRPNLVLRHEKRLSPEAQQRLR 236 (518) Q Consensus 157 ~~~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~p~gil~~~~~~~~e~~~~~~ 236 (518) .+...+..+.|++++|||++++++++..+|+||+.++...+..+.+++++..++|+||++|+++|++++..++++.+ T Consensus 144 ~~~~~~~~~~~~~~eVih~~~~~~~~~~~G~s~i~~~~~~i~~~~~~~~~~~~~~~ng~~~~~il~~~~~~~~~~~~--- 220 (384) T protein:vir:49 144 DDPRIPPKQHVPQGDILHFRLLSVDGGLTSVSPLMALGRELNIQKASDKLTLNALKNALNANGILKIKGGGLLDFKT--- 220 (384) T ss_pred cCccccceeEecCccEEEecCCCCCCceeeccHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEeCCCCChHHHH--- Confidence 87777788999999999999999998889999999999999999999999999999999999999999988877654 Q ss_pred HHHHHHhcCccccccceeccCCcccccccCChhhHHHHHHHHHHHHHHHHHhccchHhhcccc--ccccccHHHHHHHHH Q lcl|Aclame:pro 237 EQFDRAHAGSSNTGKTMVVEEGMEPIPLQLTAVEMQFIEARQLNREEVCGVYDIAPPIVHILD--RATFSNISAQMRAFY 314 (518) Q Consensus 237 ~~~~~~~~g~~n~g~~~vl~~g~~~~~~~~~~~d~q~~e~~~~~~~~Ia~~fgVpp~~lg~~~--~~~~s~~e~~~~~~~ 314 (518) +.+.+.+.+..|+|+++++++|++|+++++++.|+||+|.+++++++||++|||||++||..+ .+++++.++....|+ T Consensus 221 ~~~~~~~~~~~n~~~~~vl~~g~~~~~l~~~~~d~q~~e~~~~~~~~Ia~~fgVp~~~lg~~~~~~~~~~~~~~~~~~~i 300 (384) T protein:vir:49 221 KQSRSRQAMKQMQGGPLVLDDLEDFTPLEIKSNVAQLLSQADWTTGQFAKVYGIPESVVGGEGDKQSSLEMIYNIYFKAV 300 (384) T ss_pred HHHHHHHhcccCCccceecCCCceEEEccCChhhHHHHHHHHHHHHHHHHHhCCCHHHhCCCCCccccHHHHHHHHHHHH Confidence 345566677889999999999999999999999999999999999999999999999999754 346678899999999 Q ss_pred HHHHHHHHHHHHHHHHhhhcch-----hhccceeeechhhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHHhCCCCCCcc Q lcl|Aclame:pro 315 RDTMAIPIARIQSAMDKYVGQY-----WVRKNRMKFDIDDVIQPDWEAKSESTQKMVNSGVATPNEGREIMGLPRSDDPK 389 (518) Q Consensus 315 ~~~l~P~~~~ie~~ln~~l~~~-----~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~T~NE~R~~~g~~pi~~~~ 389 (518) +.+|.|++..|+++|+.+|... ....++++|+++.+++.|..++.++...+...|+++ ||+|+.+|++|+++.. T Consensus 301 ~~~l~pi~~~i~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~t~~e~~~~l~~~g~~~-ne~r~~~~~~p~~gGd 379 (384) T protein:vir:49 301 SRFLRPFVSELSKKLSCEVDADILPAVDPTGSNYIGLINSMVKTGTLAQNQGLYVLQQAEILP-KDLPEGETDSTLKGGE 379 (384) T ss_pred HHHHHHHHHHHHHHhchhhhhhhhhhhhccchHHHHHHHHHhhcCcccHHHHHHHHhhCCCCC-hhHHHHcCCCCCCCCC Confidence 9999999999999999987432 123467899999999999999999999999999986 9999999999998544 Q ss_pred Cceee Q lcl|Aclame:pro 390 ADELY 394 (518) Q Consensus 390 gD~~~ 394 (518) .|+.| T Consensus 380 ~~~~~ 384 (384) T protein:vir:49 380 TNEQY 384 (384) T ss_pred CCCCC Confidence 45555 No 73 >protein:vir:100882 Length: 383 # NCBI annotation: putative portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:1473 # MgeName: Lc-Nu # Cross-refs: genbank:acc:YP_358762;genbank:gi:78000027;genbank:GeneID:3726153 Probab=100.00 E-value=2.5e-76 Score=435.04 Aligned_cols=372 Identities=15% Similarity=0.189 Sum_probs=295.1 Q ss_pred CCCC----CCCCCccccccccchhhhhhhccCccCCcccCccchhhHHHHhhhHHHHHHHHHHHHhhccCceEEEEecCC Q lcl|Aclame:pro 1 MLLA----NGQTLSAPAMAELSPQMQDSYYYAPAVGMQLERQFSLYGGIYKNQPWVRTVIAKRAQALARLPVKCMFTSGD 76 (518) Q Consensus 1 ~~f~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~v~~ia~~ia~lp~~v~~~~~~ 76 (518) =+|. ++.+...........|+...+++. ....++.+.++++++|++||++||++||++|+++++. T Consensus 2 g~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~--------~~~~v~~~~~l~~~~v~~~i~~ia~~ia~~~~~~~~~--- 70 (383) T protein:vir:10 2 GLLTPKNFSKRNAKNMVYPSNPAFFTTTVGGM--------QLSYVSALSALQNTNVYSVINRIASDVSSAHFKTENT--- 70 (383) T ss_pred CcccccccccccccccccccchhhhhhhccCc--------cccccchhHhhcchHHHHHHHHHHHhhccCceeeccc--- Confidence 1222 222222222212222332222211 1223445678899999999999999999999998642 Q ss_pred ceeeecchHHHHHhhccCccCCHHHHHHHHHHHHHHcCCeeEEeeeCCCCceeeeeeeCCcceEEEeccCcceEEEEeec Q lcl|Aclame:pro 77 TETEEHDTGYAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQKNKSGTPEKLMPMHPSRVAIKRNSRTGRYEYYFQA 156 (518) Q Consensus 77 ~~~~~~~~~~~~l~~~PN~~~t~~~f~~~~~~~~ll~G~~~~~i~~~~~G~~~~l~~l~p~~v~~~~~~~~~~~~~~~~~ 156 (518) ....|+.+||++||+++||+.++.+++++||+|++++++ ..+++|+++.+|++..+.++ .+|.+.. T Consensus 71 --------~~~~ll~~PN~~~t~~~f~~~~~~~l~l~Gn~~~~i~~~----~~~~~p~~~~~v~~~~~~~~--~~~~~~~ 136 (383) T protein:vir:10 71 --------ATLNRLESPSSLIGRFSFWQGALMQLCLSGNDYIPLVGQ----NLEHIPNSDVQINYLPGNMG--IVYTVLE 136 (383) T ss_pred --------chhhhhhCCCCCCCHHHHHHHHHHHhhhcCCeEEEEEcC----ceeEeecCcceEEEEEcCCc--eEEEEEE Confidence 224577899999999999999999999999999999764 56788988888888776543 3344433 Q ss_pred cCCCCceeEEEeeeeeEEeecCCCCc--ccccchHHHHHHHHHHHHHHHHHHHHHHHHccCCcceeeeeCCcC-CHHHHH Q lcl|Aclame:pro 157 GAGVGTQLVSFADDEVVPIRFFNPDG--LERGLSLMESLKSTIFSEDSSRNATAAMWKNAGRPNLVLRHEKRL-SPEAQQ 233 (518) Q Consensus 157 ~~~~~~~~~~~~~~~vih~~~~~~~~--~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~p~gil~~~~~~-~~e~~~ 233 (518) . .++..+.|++++|||||++++++ ..+|+||+..+...+....++++++.++|+||++|+|+|++++.+ ++++.+ T Consensus 137 ~--~~~~~~~~~~~evih~r~~~~~~~~~~~G~s~l~~~~~~i~~~~~~~~~~~~~f~ng~~~~~il~~~~~~~~~e~~~ 214 (383) T protein:vir:10 137 S--NDRPKMVLRQDQMLHFRLMPDPQYRYLIGRSPLESLQNALNLDDKASKSNMSAMENQINPAGKLTISNYLSDGKDLE 214 (383) T ss_pred c--CCceEEEEcccceEEeccCCCCcccccccccHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEeCCCCCCHHHHH Confidence 2 34567889999999999877643 468999999999999999999999999999999999999999877 578899 Q ss_pred HHHHHHHHHhcCccccccceeccCCcccccccCChhhHHHH-HHHHHHHHHHHHHhccchHhhccc--cccccccHHHHH Q lcl|Aclame:pro 234 RLREQFDRAHAGSSNTGKTMVVEEGMEPIPLQLTAVEMQFI-EARQLNREEVCGVYDIAPPIVHIL--DRATFSNISAQM 310 (518) Q Consensus 234 ~~~~~~~~~~~g~~n~g~~~vl~~g~~~~~~~~~~~d~q~~-e~~~~~~~~Ia~~fgVpp~~lg~~--~~~~~s~~e~~~ 310 (518) ++++.|++.++| .|+|+++++++|++|++++.++.|+|++ |++++++++||++|||||++||.. ++.+++|.+++. T Consensus 215 ~~~~~~~~~~~~-~n~~~~~vl~~g~~~~~l~~~~~d~~~l~e~~~~~~~~Ia~afgVPp~~lg~~~~~~~~~sn~eq~~ 293 (383) T protein:vir:10 215 SAREEFEKANTG-DNSGRLMVLPDGFDYTQLEMKTDVFKALADNSAYSADQISKAFGVPSDILGGGTSTESQHSNIDQIK 293 (383) T ss_pred HHHHHHHHHhCc-cccCCccccCCCceEEecCCChhHHHHHHHHHHHHHHHHHHHhCCCHHHcCCccCCCCccccHHHHH Confidence 999999998877 6899999999999999999999999975 899999999999999999999974 466788988887 Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhcchhhccceeeechhhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHHhCCCCCCccC Q lcl|Aclame:pro 311 RAFYRDTMAIPIARIQSAMDKYVGQYWVRKNRMKFDIDDVIQPDWEAKSESTQKMVNSGVATPNEGREIMGLPRSDDPKA 390 (518) Q Consensus 311 ~~~~~~~l~P~~~~ie~~ln~~l~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~T~NE~R~~~g~~pi~~~~g 390 (518) ..| .+||.|+++.||++|+++|+.. .++||++.+++.|.+++++.+.+++++|++|+||+|+++|++|++ +| T Consensus 294 ~~~-~~~l~P~~~~ie~~l~~~l~~~-----~~~f~~~~l~~~d~~~~~~~~~~~~~~G~~t~nE~R~~lg~~p~~--~~ 365 (383) T protein:vir:10 294 ATY-LANLNSYVNPIVDELRLKMNAP-----DLELDIKDMLDVDDSILINQVSNLAKSGVLGAEQAQFILTRSGFL--PD 365 (383) T ss_pred HHH-HHHHHHHHHHHHHHHHHhhCCc-----eEEeechhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCccc--CC Confidence 655 5699999999999999999753 588999999999999999999999999999999999999999997 66 Q ss_pred ceeeecccccccccccccCCCCCCCCCCCCcccCCCCCccC Q lcl|Aclame:pro 391 DELYANSALQPLGATPDGAVEGEEAPAPKRPASTPVASLDQ 431 (518) Q Consensus 391 D~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 431 (518) |......+..++ ..|.. + T Consensus 366 d~~~~~~~~~~~---~gGd~--------------------e 383 (383) T protein:vir:10 366 NLPEFKPLTNET---KGGDD--------------------K 383 (383) T ss_pred cccccCCCcccC---CCCCC--------------------C Confidence 654332221111 00100 0 No 74 >protein:vir:4828 Length: 382 # NCBI annotation: ORF24 # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:105 # MgeName: 7201 # Cross-refs: genbank:acc:NP_038325;genbank:gi:9634651;genbank:GeneID:1262630 Probab=100.00 E-value=1.8e-76 Score=435.85 Aligned_cols=378 Identities=14% Similarity=0.151 Sum_probs=304.9 Q ss_pred CCCCCCCCCccccccccchhhhhhhccCccCCcccCccchhhHHHHhhhHHHHHHHHHHHHhhccCceEEEEecCCceee Q lcl|Aclame:pro 1 MLLANGQTLSAPAMAELSPQMQDSYYYAPAVGMQLERQFSLYGGIYKNQPWVRTVIAKRAQALARLPVKCMFTSGDTETE 80 (518) Q Consensus 1 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~v~~ia~~ia~lp~~v~~~~~~~~~~ 80 (518) =+|.+...+...........+...+...+..+ ..++...++++++|++||++||++||++||++++... T Consensus 2 g~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~v~~~~~l~~~~v~~~i~~ia~~ia~~~~~~~~~~~----- 70 (382) T protein:vir:48 2 PIFNLATESPPDNQGGFFDVVDSDFLASLKGN------EWVSAETALRNSDLFSIINQLSNDLATVKLITSRKKL----- 70 (382) T ss_pred ccccccccCCcccccccccchhhhccccccCC------cccchHhhhccHHHHHHHHHHHHhhccCceeeecchh----- Confidence 24444333333333333333333333333222 3455677899999999999999999999999987542 Q ss_pred ecchHHHHHhhccCccCCHHHHHHHHHHHHHHcCCeeEEeeeCCCCceeeeeeeCCcceEEEeccCcceEEEEeeccCCC Q lcl|Aclame:pro 81 EHDTGYAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQKNKSGTPEKLMPMHPSRVAIKRNSRTGRYEYYFQAGAGV 160 (518) Q Consensus 81 ~~~~~~~~l~~~PN~~~t~~~f~~~~~~~~ll~G~~~~~i~~~~~G~~~~l~~l~p~~v~~~~~~~~~~~~~~~~~~~~~ 160 (518) ..|+.+||++||+++|++.++.+++++||+|++++++.+|++++|+|++|++|++..+.+++.+.|.+...+.. T Consensus 71 ------~~L~~~PN~~~t~~~f~~~l~~~l~l~Gna~~~i~rd~~G~~~~l~~i~~~~v~v~~~~~~~~~~y~~~~~~~~ 144 (382) T protein:vir:48 71 ------QGIVDNPSNNANRFNFYQSIFAQMLLGGEAFAYRWRNENGRDMKWEYLRPSQVSFNRLDNKDGIYYNITFDDPR 144 (382) T ss_pred ------hhhhhhcCCCCCHHHHHHHHHHHhhhcCCEEEEEEECCCCcEEEEEEEcCceeEEEEcCCCCeEEEEEEecCcc Confidence 35899999999999999999999999999999999999999999999999999999998889999999887777 Q ss_pred CceeEEEeeeeeEEeecCCCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHccCCcceeeeeCCcCCHHHHHHHHHHHH Q lcl|Aclame:pro 161 GTQLVSFADDEVVPIRFFNPDGLERGLSLMESLKSTIFSEDSSRNATAAMWKNAGRPNLVLRHEKRLSPEAQQRLREQFD 240 (518) Q Consensus 161 ~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~p~gil~~~~~~~~e~~~~~~~~~~ 240 (518) .+..+.|++++||||+++++++.++|+||+.++..++....+++++..++|+||++|+++|++++.+++++.+++++.|. T Consensus 145 ~~~~~~~~~~evih~~~~~~~~~~~G~s~l~~~~~~i~~~~~~~~~~~~~~~ng~~p~~il~~~~~~~~e~~~~~~~~~~ 224 (382) T protein:vir:48 145 IPPKQHVPQNDVLHFRLLSVDGGMTSVSPLMALSRELDIQKASGNLTINSLKNALNANGILKIKGGGLLDFKTKLSRSRQ 224 (382) T ss_pred ccceeEEcCccEEEecCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEeCCCCChHHHHHHHHHHH Confidence 77788999999999999999998999999999999999999999999999999999999999999999999999999887 Q ss_pred HHhcCccccccceeccCCcccccccCChhhHHHHHHHHHHHHHHHHHhccchHhhccccccccccHHHHHHHHHHHHHHH Q lcl|Aclame:pro 241 RAHAGSSNTGKTMVVEEGMEPIPLQLTAVEMQFIEARQLNREEVCGVYDIAPPIVHILDRATFSNISAQMRAFYRDTMAI 320 (518) Q Consensus 241 ~~~~g~~n~g~~~vl~~g~~~~~~~~~~~d~q~~e~~~~~~~~Ia~~fgVpp~~lg~~~~~~~s~~e~~~~~~~~~~l~P 320 (518) .. ..|+|+++|+++|++|++++.++.|+||+|.+++.+++||++|||||.++|..++ +++.+++.+.|++.||.| T Consensus 225 ~~---~~n~g~~~vl~~g~~~~~l~~~~~d~q~~e~~~~~~~~Ia~afgVp~~~lg~~~~--~~~~~~~~~~~~~~~l~p 299 (382) T protein:vir:48 225 AM---KQMQGGPLVLDDLEDFTPLEIKSNVSQLLKQADWTTGQFAKVYGIPDNVVGGQGD--QQSSLEMSSDLYSKAVSR 299 (382) T ss_pred hh---ccCCCCeeEcCCCceEEEccCChhHHHHHHHHHHHHHHHHHHhCCCHHHhCCCCC--cccHHHHHHHHHHHHHHH Confidence 64 3578999999999999999999999999999999999999999999999997554 446788899999999999 Q ss_pred HHHHHHHHHHhhhcchhhccceeeechhhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHHhCCCC---CCccCceeeecc Q lcl|Aclame:pro 321 PIARIQSAMDKYVGQYWVRKNRMKFDIDDVIQPDWEAKSESTQKMVNSGVATPNEGREIMGLPRS---DDPKADELYANS 397 (518) Q Consensus 321 ~~~~ie~~ln~~l~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~T~NE~R~~~g~~pi---~~~~gD~~~~~~ 397 (518) +++.|+++|+++|++..+......++ .|.......+.+++.+|++|+||+|+.++...+ +.+.++.+..+ T Consensus 300 ~~~~i~~~l~~~l~~~~~~~~~~~~~------~~~~~~~~~~~~l~~~g~~t~~e~r~~l~~~g~~~~~~~~~~~~~~~- 372 (382) T protein:vir:48 300 YLRPFLSELSQKLSCDVDADIFPAVD------PTGSNYISRINSLVKTGTLAQNQGLYILQQAEILPKELPNGENPNST- 372 (382) T ss_pred HHHHHHHHHHHHhcChhhhhhhhhhc------cchhHHHHHHHHHhhcCccCHHHHHHHHhhCCCCCcchhhhhcCCCC- Confidence 99999999999999876554433343 344455666778999999999999999854332 22233221110 Q ss_pred cccccccccccCCCCCC Q lcl|Aclame:pro 398 ALQPLGATPDGAVEGEE 414 (518) Q Consensus 398 n~~~~~~~~~~~~~~~~ 414 (518) ..+|+..+++ T Consensus 373 -------~~GGd~~~~~ 382 (382) T protein:vir:48 373 -------LKGGEEDGQD 382 (382) T ss_pred -------CCCCCCCCCC Confidence 0011100000 No 75 >protein:vir:4156 Length: 542 # NCBI annotation: portal protein # Family: family:all:1379 # ACLAME annotation(s): phi:0000161 - phage head/capsid # MgeID: mge:87 # MgeName: psiM2 # Cross-refs: genbank:acc:NP_046965;genbank:gi:9630535;genbank:GeneID:1261709 Probab=100.00 E-value=6.5e-76 Score=432.79 Aligned_cols=487 Identities=14% Similarity=0.114 Sum_probs=315.8 Q ss_pred CCCCCC-----CCccc--cccccchhhhhhhccCccCCcccCccchhhHHHHhhhHHHHHHHHHHHHhhccCceEEEEec Q lcl|Aclame:pro 2 LLANGQ-----TLSAP--AMAELSPQMQDSYYYAPAVGMQLERQFSLYGGIYKNQPWVRTVIAKRAQALARLPVKCMFTS 74 (518) Q Consensus 2 ~f~~~~-----~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~v~~ia~~ia~lp~~v~~~~ 74 (518) ||..-- ..+.+ ....-+..+....+. .....+ .+......++..+++|++||++||++||++||+++..+ T Consensus 1 ~~~~~~~i~s~~~~~~i~~~~~~s~~~~~~~~~-~~~~pp--~~~~~la~l~~~n~~v~scI~~ia~~IA~l~~~~~~~~ 77 (542) T protein:vir:41 1 MFNYHLSIRSLEKYKAIKREEVESQALGETRFE-EYVEPK--VNPLVLLSLLQVNPYHASACSIKANDIIRTGYILEGDD 77 (542) T ss_pred CccccccccccccchhhhhccccccccccccCC-ccccCC--CCHHHHHHHHhhcHHHHHHHHHHHHHHhhCceeeeccc Confidence 666211 11111 011111111111111 111111 23445567888999999999999999999999996433 Q ss_pred CCceeeecchHHHHHhhccCccCCHHHHHHHHHHHHHHcCCeeEEeeeCCCCceeeeeeeCCcceEEEeccCcceEE--- Q lcl|Aclame:pro 75 GDTETEEHDTGYAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQKNKSGTPEKLMPMHPSRVAIKRNSRTGRYE--- 151 (518) Q Consensus 75 ~~~~~~~~~~~~~~l~~~PN~~~t~~~f~~~~~~~~ll~G~~~~~i~~~~~G~~~~l~~l~p~~v~~~~~~~~~~~~--- 151 (518) .. .++...||++||+++|++.++.+++++||+|++++++..|++.+|+|++|.+|++..+....... T Consensus 78 ~~----------~l~~~lpN~~~s~~~f~~~~v~~lll~Gnayi~i~rd~~G~~~~L~~l~~~~v~v~~d~~~~~~~~~~ 147 (542) T protein:vir:41 78 EG----------VVDEFIRACKPSFEYVLLRALEDLQVFNYCTLEVVRDDRGDPIRFEYIPSHTIRVHKDGSRYRQTWDG 147 (542) T ss_pred ch----------hhhhhcCCCCCCHHHHHHHHHHHHhhcCCeEEEEEEcCCCcEEEEEEEcCcceEEEEcCCeeEeeecC Confidence 21 12334599999999999999999999999999999999999999999999999998765432211 Q ss_pred ----EEeec------cCCCCceeEEEeeeeeEEeecCCCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHccCCcceee Q lcl|Aclame:pro 152 ----YYFQA------GAGVGTQLVSFADDEVVPIRFFNPDGLERGLSLMESLKSTIFSEDSSRNATAAMWKNAGRPNLVL 221 (518) Q Consensus 152 ----~~~~~------~~~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~p~gil 221 (518) |...+ ....+.....+++.+|||||.+++.+.+||+||+..+..++....++++++.++|+||++|++|| T Consensus 148 ~~~~~~~~y~~~~~~~~~~g~~~~~~~~~eIiHir~~~~~~~~~Glspi~~~~~~i~~~~~~~~~~~~~f~Ng~~p~gIL 227 (542) T protein:vir:41 148 VNITHFKDYRYEGEINPETGEDQDSVGANELVFIHIPSPVCSYYGVPRYVSAAPAILAMQKIDEYNYAFFDNYTIPSYVI 227 (542) T ss_pred CcceeEEeecccccccccccccccccCcccEEEecCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhccCCccEEE Confidence 11111 11122334568899999999999878889999999999999999999999999999999999999 Q ss_pred eeCC----------cCCHHHHHHHHHHHHHHhcCc-cccccceecc------CCcccccccCChhhHHHHHHHHHHHHHH Q lcl|Aclame:pro 222 RHEK----------RLSPEAQQRLREQFDRAHAGS-SNTGKTMVVE------EGMEPIPLQLTAVEMQFIEARQLNREEV 284 (518) Q Consensus 222 ~~~~----------~~~~e~~~~~~~~~~~~~~g~-~n~g~~~vl~------~g~~~~~~~~~~~d~q~~e~~~~~~~~I 284 (518) ++++ .+++++.+++++.|++.+.|. +|+|+++|++ +|++|+++++++.|+||+|++++++++| T Consensus 228 ~~~~~l~de~~~~~~~~~e~~~~lk~~~~~~~~g~~~n~gk~~vL~~~~~~~~g~~~~pl~~~~~d~qfle~~~~~~~~I 307 (542) T protein:vir:41 228 TVTGEFEDELEEDPDGNPTGRTVIQALIEDNFKHLKEAPHTPLVFSIPGGDTVKVTFTPLNTSQKELSFREYAAEKKYDI 307 (542) T ss_pred EeCCccccccccccccCHHHHHHHHHHHHHHHhhhhcccCceeEeeccCCcccceeEEEcCCChhHHHHHHHHHHHHHHH Confidence 8864 457889999999999999885 5788999984 7999999999999999999999999999 Q ss_pred HHHhccchHhhcccccc--ccccHHHHHHHHHHHHHHHHHHHHHHHHHhhhcchhhccceeeechhhhhccCHHHHHHHH Q lcl|Aclame:pro 285 CGVYDIAPPIVHILDRA--TFSNISAQMRAFYRDTMAIPIARIQSAMDKYVGQYWVRKNRMKFDIDDVIQPDWEAKSEST 362 (518) Q Consensus 285 a~~fgVpp~~lg~~~~~--~~s~~e~~~~~~~~~~l~P~~~~ie~~ln~~l~~~~~~~~~~~fd~~~l~~~d~~~~~~~~ 362 (518) |++|||||.+||+.+.+ +++|+|++.+.|+++||+|++.+|+++||++|++..+.+++++|+...+++.|.. +.+ T Consensus 308 a~afgVPp~~lG~~~~~t~n~sn~Eq~~~~f~~~tL~P~~~~ie~~ln~~L~~~~~~~~~~~f~~~~ll~~d~~---~~~ 384 (542) T protein:vir:41 308 AAAHMIDPYRLGIADTGPLGGNFAEVTRRTYYESVVRPQQNIISSILTDFFQVKFNPKTRFKFNDETLLESDSV---RNC 384 (542) T ss_pred HHHhCCCHHHhCcCCCcccccccHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCCceEEEecchhhcchHHH---HHH Confidence 99999999999997655 4589999999999999999999999999999999888889999999999988754 446 Q ss_pred HHHHhCCCcCHHHHHHHH-hCCCCCCccCceeeecccccccccccccCCCCCCCCCCCCcccCCCCCccCCccccccccC Q lcl|Aclame:pro 363 QKMVNSGVATPNEGREIM-GLPRSDDPKADELYANSALQPLGATPDGAVEGEEAPAPKRPASTPVASLDQSPPASVPGLS 441 (518) Q Consensus 363 ~~~~~~g~~T~NE~R~~~-g~~pi~~~~gD~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 441 (518) ..++++|++|+||+|+.+ |++| ++|.++.|.|... .....+.. +.+..+. .+......+..+.-.+..+ T Consensus 385 ~~~v~~GilT~NE~Re~L~g~~p----gdd~~l~p~~~~~-~~~~~~~~----n~~~~~~-~~~~k~~~k~~~~~~~~~~ 454 (542) T protein:vir:41 385 ALLVQSGVLTPAEARERLFGLDG----GPDIFMVPSKGAA-KSVKRQER----NYEKNQI-REIRKIYAKYRPRFNEIIS 454 (542) T ss_pred HHHHhCCCCCHHHHHHhhCCCCC----CCccccccccccc-cccccCCc----CCCCCch-hhhhhcccccCcccccccc Confidence 678999999999999854 5543 3344455555432 21111111 1110000 0000000000000000000 Q ss_pred hhhhcchhHHHHHHHHHHhhccCcchhHHHHHHH--HHHHhhhhhhhcccc-c---------chhhhhhhHHHHHHHHHH Q lcl|Aclame:pro 442 PTNSDRSTDSGKTEPRRLMQKPPPKESSPKHLRA--VKGAMGRGKDIKGFA-L---------QLAEKYPDDLEDILLAVQ 509 (518) Q Consensus 442 ~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~--~~~~~~~~~~~~~~~-~---------~~~~~~~~~~~~~~~~~~ 509 (518) ...+......++.+++. ...+++++..++- +...||..-.+-++- . +-.|.+...++|+-.-.- T Consensus 455 ~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 530 (542) T protein:vir:41 455 SKLSAEEKKKKIDESLA----EFRAEAYEAGKKMLIIGGDMGSMSALNQGVSVIPSKPLNLERYEELLEASVEDMIGRIR 530 (542) T ss_pred ccccchhhcccccchhh----hhHHhHHhcCceEEEeecCchhhhhhhccceeccCCCcChHHHHHHHHhhHHHHHHHHH Confidence 00001111111111110 1112222211111 122233332222211 1 111222222333332222 Q ss_pred HHhhhcccC Q lcl|Aclame:pro 510 LALAERKDN 518 (518) Q Consensus 510 ~~~~~~~~~ 518 (518) --|-.++.= T Consensus 531 ~~~~~~~~~ 539 (542) T protein:vir:41 531 HYLYKVIGW 539 (542) T ss_pred HHHHHHhhh Confidence 222222211 No 76 >protein:vir:4952 Length: 386 # NCBI annotation: portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:108 # MgeName: Sfi19 # Cross-refs: genbank:acc:NP_049928;genbank:gi:9632899;genbank:GeneID:1262075 Probab=100.00 E-value=1.3e-75 Score=431.14 Aligned_cols=385 Identities=15% Similarity=0.160 Sum_probs=308.0 Q ss_pred CCCCCCCCCccccccccchhhhhhhccCccCCcccCccchhhHHHHhhhHHHHHHHHHHHHhhccCceEEEEecCCceee Q lcl|Aclame:pro 1 MLLANGQTLSAPAMAELSPQMQDSYYYAPAVGMQLERQFSLYGGIYKNQPWVRTVIAKRAQALARLPVKCMFTSGDTETE 80 (518) Q Consensus 1 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~v~~ia~~ia~lp~~v~~~~~~~~~~ 80 (518) -+|.+......+.. ...+++......... ..+.....++.+.++++++|++||++||++||++|++++++. T Consensus 2 ~~f~~~~~~~~~~~-~~~~~~~~~~~~~~~--~~~~~~~~v~~~~al~~~~v~~~i~~ia~~ia~~p~~~~~~~------ 72 (386) T protein:vir:49 2 PIFNITNLATESPP-INQESFFDIADSDFL--ASLNSSEWVSAENALKNSDLFSIISQLSNDLATAKITTSRKQ------ 72 (386) T ss_pred chhhhhccCCCCcc-cchhhhhhhhhcccc--ccccCCceechhhhhccHHHHHHHHHHHHHhhhCceeeccch------ Confidence 23433322222221 112222111111111 111222345567789999999999999999999999998654 Q ss_pred ecchHHHHHhhccCccCCHHHHHHHHHHHHHHcCCeeEEeeeCCCCceeeeeeeCCcceEEEeccCcceEEEEeeccCCC Q lcl|Aclame:pro 81 EHDTGYAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQKNKSGTPEKLMPMHPSRVAIKRNSRTGRYEYYFQAGAGV 160 (518) Q Consensus 81 ~~~~~~~~l~~~PN~~~t~~~f~~~~~~~~ll~G~~~~~i~~~~~G~~~~l~~l~p~~v~~~~~~~~~~~~~~~~~~~~~ 160 (518) ...|+.+||++||+++||+.++.+++++||+|++++++.+|++++|+|++|++|++..+.+++...|.|...+.. T Consensus 73 -----~~~l~~~PN~~~t~~~f~~~~~~~lll~Gna~~~i~r~~~g~~~~l~~i~~~~v~v~~~~~~~~~~y~~~~~~~~ 147 (386) T protein:vir:49 73 -----LQGIVDNPSNNANRFNFYQSIFAQMLLGGEAFAYRWRNDNGRDMKWEYLRPSQVSFNRLDNQNGLYYNITFDDPH 147 (386) T ss_pred -----hhhhhhccCCCCCHHHHHHHHHHHhhhcCCEEEEEEECCCCcEEEEEEecCceeEEEEcCCCceEEEEEEEcCcc Confidence 245899999999999999999999999999999999999999999999999999999999889999998877777 Q ss_pred CceeEEEeeeeeEEeecCCCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHccCCcceeeeeCCcCCHHHHHHHHHHHH Q lcl|Aclame:pro 161 GTQLVSFADDEVVPIRFFNPDGLERGLSLMESLKSTIFSEDSSRNATAAMWKNAGRPNLVLRHEKRLSPEAQQRLREQFD 240 (518) Q Consensus 161 ~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~p~gil~~~~~~~~e~~~~~~~~~~ 240 (518) ++..+.|++++||||+++++++.++|+||+..+...+....++++++.++|+||++|+++|++++..++++.+++++.|. T Consensus 148 ~~~~~~~~~~evih~~~~~~~~~~~G~s~l~~~~~~i~~~~~~~~~~~~~~~ng~~~~~il~~~~~~~~~~~~~~~~~~~ 227 (386) T protein:vir:49 148 IAPKQHVPQNDILHFRLLSVDGGLTSVSPLMALGREFNIQKASDKLTISALKNALNANGILKIKGGGLLDFKTKVSRSRQ 227 (386) T ss_pred ccceeEEccccEEEecCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHHHccCCccEEEEeCCCCChHHHHHHHHHHH Confidence 77888999999999999999998899999999999999999999999999999999999999999999999999999887 Q ss_pred HHhcCccccccceeccCCcccccccCChhhHHHHHHHHHHHHHHHHHhccchHhhccccccccccHHHHHHHHHHHHHHH Q lcl|Aclame:pro 241 RAHAGSSNTGKTMVVEEGMEPIPLQLTAVEMQFIEARQLNREEVCGVYDIAPPIVHILDRATFSNISAQMRAFYRDTMAI 320 (518) Q Consensus 241 ~~~~g~~n~g~~~vl~~g~~~~~~~~~~~d~q~~e~~~~~~~~Ia~~fgVpp~~lg~~~~~~~s~~e~~~~~~~~~~l~P 320 (518) .. ..|+|+++|+++|++|++++.++.|+||+|++++++++||++|||||++||.... ++++.+ +..+|+.++|.| T Consensus 228 ~~---~~n~g~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgVPp~~lg~~~~-~~~~~~-~~~~~~~~~i~~ 302 (386) T protein:vir:49 228 AM---KQMQGGPLVLDDLEDFTPLEIKSNVAQLLSQADWTTGQFAKVYGIPESIVGGDGD-QQSSLE-MIYNIYFKSVSR 302 (386) T ss_pred Hh---ccCCCCceecCCCceEEEccCChhHHHHHHHHHHHHHHHHHHhCCCHHHhCCCCC-ccchHH-HHHHHHHHHHHH Confidence 64 3688999999999999999999999999999999999999999999999996443 445544 456889999999 Q ss_pred HHHHHHHHHHhhhcchhhccceeeechhhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHHhCCCCCCccCceeeeccccc Q lcl|Aclame:pro 321 PIARIQSAMDKYVGQYWVRKNRMKFDIDDVIQPDWEAKSESTQKMVNSGVATPNEGREIMGLPRSDDPKADELYANSALQ 400 (518) Q Consensus 321 ~~~~ie~~ln~~l~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~T~NE~R~~~g~~pi~~~~gD~~~~~~n~~ 400 (518) ++..|+++|+++|.+ .++||...+++.|...++..+.+++++|++|+||+|++++..++.. .+.. .... T Consensus 303 ~l~~i~~~~~~~l~~------~~~~~~~~~~~~d~~~~~~~~~~l~~~g~~t~nE~r~~l~~~~~~~--~~~~---~~~~ 371 (386) T protein:vir:49 303 YLRPFVSEMSKKLSC------EVDVDISPAVDPTGSNYISLINSMVKSGTLAQNQGLYILQQAEILP--KELP---DGKN 371 (386) T ss_pred HHHHHHHHHHHHhcc------hhcccchhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHHhhCCCCC--CcCc---chhc Confidence 999999999999975 3678999999999999999999999999999999999998766531 1111 0000 Q ss_pred ccccccccCCCCCCCCCCCCcccCCCCCccCCc Q lcl|Aclame:pro 401 PLGATPDGAVEGEEAPAPKRPASTPVASLDQSP 433 (518) Q Consensus 401 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 433 (518) +.....++ ++.+++. T Consensus 372 ~~~~~~~g------------------Gd~~~~~ 386 (386) T protein:vir:49 372 PNRTSLKG------------------GEINEQD 386 (386) T ss_pred cCCCCCCC------------------CCCCCCC Confidence 00000000 0000000 No 77 >protein:vir:4089 Length: 395 # NCBI annotation: hypothetical protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:86 # MgeName: 2389 # Cross-refs: genbank:acc:NP_510984;swissprot:trembl:q8w606;genbank:gi:17488506;uniprot:Q8W606;genbank:GeneID:1260314 Probab=100.00 E-value=9.2e-76 Score=431.96 Aligned_cols=384 Identities=13% Similarity=0.083 Sum_probs=284.1 Q ss_pred ccccchhhhhhhccCccCC-----cccCccchhhHHHHhhhHHHHHHHHHHHHhhccCceEEEEecCCceeeecchHHHH Q lcl|Aclame:pro 14 MAELSPQMQDSYYYAPAVG-----MQLERQFSLYGGIYKNQPWVRTVIAKRAQALARLPVKCMFTSGDTETEEHDTGYAK 88 (518) Q Consensus 14 ~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~v~~~v~~ia~~ia~lp~~v~~~~~~~~~~~~~~~~~~ 88 (518) |.. -.|+...|+...... ..+......+.+.++++++|++||++||++||++||++++++ .+..++.+++ T Consensus 1 Mg~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~v~~Ia~~ia~~p~~~~~~~----~~~~~~~~~l 75 (395) T protein:vir:40 1 MGF-KSWVSGFFNEEQRTLNLTDTVWCSIPSEKLKELSIKKWAIDSCANKIANTLSCAEVLTYEKG----EEVRKKNWYM 75 (395) T ss_pred Cch-HHHHHhhhcccccccccccchhhccccccchhhhhhhHHHHHHHHHHHHHHhhCceeeccCC----ccccchHHHH Confidence 211 112222222111000 001112334567889999999999999999999999998754 2456777888 Q ss_pred HhhccCccCCHHHHHHHHHHHHHHcCCeeEEeeeCCCCceeeeeeeCCcceEEEeccCcceEEEEeeccCCCCceeEEEe Q lcl|Aclame:pro 89 LLADPCEYLDPFAFWEWVASTLDIYGETYLAIQKNKSGTPEKLMPMHPSRVAIKRNSRTGRYEYYFQAGAGVGTQLVSFA 168 (518) Q Consensus 89 l~~~PN~~~t~~~f~~~~~~~~ll~G~~~~~i~~~~~G~~~~l~~l~p~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (518) |+.+||++||+++||+.++.+++++||+|+++.++.. ++..+. .+.........++.+...+ .+-.+.|+ T Consensus 76 L~~~PN~~~t~~~f~~~~~~~lll~Gnay~~~~~~~~------~~~~~~--~~~~~~~~~~~~~~v~~~~--~~~~~~~~ 145 (395) T protein:vir:40 76 FNVEANQNQNATEFWKKAIYKLVYDNEALIFMQDEYI------YVADSF--TKNDKSLYENTYTEVTLKD--LTLKKEFK 145 (395) T ss_pred HHhcCCCCCCHHHHHHHHHHHHhhcCceEEEEecCce------eecCCc--cccccccccceeeeeeecC--ceeeeeec Confidence 9999999999999999999999999999999876532 222221 1111111111112222211 12235689 Q ss_pred eeeeEEeecCCCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHccCCcceeeeeCCcCCHHHHHHHHHHHHHHhcCc-c Q lcl|Aclame:pro 169 DDEVVPIRFFNPDGLERGLSLMESLKSTIFSEDSSRNATAAMWKNAGRPNLVLRHEKRLSPEAQQRLREQFDRAHAGS-S 247 (518) Q Consensus 169 ~~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~p~gil~~~~~~~~e~~~~~~~~~~~~~~g~-~ 247 (518) +++||||++++..+..++.+.+..+...+.... ....+.++.++.++++.+..+++++.+++++.|++.+.+. . T Consensus 146 ~~evih~r~~~~~~~~~~~~l~~~~~~~~~~~~-----~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (395) T protein:vir:40 146 ESEVLHLTLNNESIKSIIDGFYLLYGDLLTAAV-----NKYKKLNSRKIIVKLKAMFGQTPEAEEKLRLMLSERMKKFLA 220 (395) T ss_pred cccEEEeecCCCCccccchhHHHHHHHHHHHHH-----HHHHhcCCCCceEEEecccCCCHHHHHHHHHHHHHHHHHhhc Confidence 999999998776555555555444444333222 2334456666766777788899999999999999999774 5 Q ss_pred ccccceeccCCcccccccCChhhHHHHHHHHHHH---HHHHHHhccchHhhccccccccccHHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 248 NTGKTMVVEEGMEPIPLQLTAVEMQFIEARQLNR---EEVCGVYDIAPPIVHILDRATFSNISAQMRAFYRDTMAIPIAR 324 (518) Q Consensus 248 n~g~~~vl~~g~~~~~~~~~~~d~q~~e~~~~~~---~~Ia~~fgVpp~~lg~~~~~~~s~~e~~~~~~~~~~l~P~~~~ 324 (518) ++++++++++|++|+++++++.|+||+|.++++. ++||++|||||+++| ++++|++++.+.|+++||.||+.+ T Consensus 221 ~~~~~~vl~~g~~~~~l~~~~~d~q~~e~~~~~~~~~~~Ia~~fgVPp~~l~----~~~sn~e~~~~~f~~~~L~P~~~~ 296 (395) T protein:vir:40 221 EGDSALPVEDGMEIDELAGDSKIAESRDIKKMIDDVFEMVANSFNIPLGLAK----GDTVGLSEQVNSFLMFSINPIAEM 296 (395) T ss_pred cCCceeecCCCceEEeccCChhhhhHHHHHHHHHHHHHHHHHHhCCCHHHhc----CCCcCHHHHHHHHHHHHHHHHHHH Confidence 7888999999999999999999999999998874 799999999999996 478899999999999999999999 Q ss_pred HHHHHHhhhcchhh--ccceeeechhhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHHhCCCCCCccCceeeeccccccc Q lcl|Aclame:pro 325 IQSAMDKYVGQYWV--RKNRMKFDIDDVIQPDWEAKSESTQKMVNSGVATPNEGREIMGLPRSDDPKADELYANSALQPL 402 (518) Q Consensus 325 ie~~ln~~l~~~~~--~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~T~NE~R~~~g~~pi~~~~gD~~~~~~n~~~~ 402 (518) ||++||++|++..+ .+++++||++.++++|.+++++.+.+++++|++|+||+|+++|+||+++|+||++++++|++|+ T Consensus 297 ie~~l~~kLl~~~~~~~g~~i~fd~~~ll~~d~~~~~~~~~~~~~~G~~t~NE~R~~~g~~pi~~~~gD~~~~~~n~~~~ 376 (395) T protein:vir:40 297 FTDEGNRKFYGRDSVLERTYMKLDTTRIKVQDIQEIASSMDVLFHIGVNTIDDNLRMIGREPVMSPETQERFVTKNYAPL 376 (395) T ss_pred HHHHHHHhcCChhhhcCCceEEEechhhhccCHHHHHHHHHHHHhCCCCCHHHHHHHhCCCCCCCCCCceeeeccccccc Confidence 99999999998654 3678999999999999999999999999999999999999999999999999999999999998 Q ss_pred ccccccCCCCCCCCCCCCcccCCCCCccCCccc Q lcl|Aclame:pro 403 GATPDGAVEGEEAPAPKRPASTPVASLDQSPPA 435 (518) Q Consensus 403 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 435 (518) +...+....++..... . +. T Consensus 377 ~~~~~~~kgge~~~~~----------~----~~ 395 (395) T protein:vir:40 377 GENEEDLKGGDINENK----------G----DS 395 (395) T ss_pred cccccccCCCCCCCCc----------C----CC Confidence 7654322211111100 0 00 No 78 >protein:vir:78310 Length: 376 # NCBI annotation: gp3 # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:1850 # MgeName: B025 # Cross-refs: genbank:acc:YP_001468642;genbank:gi:157325220;genbank:GeneID:5601655 Probab=100.00 E-value=5.9e-76 Score=433.03 Aligned_cols=365 Identities=16% Similarity=0.142 Sum_probs=287.2 Q ss_pred CCCCCCCCCccccccccchhhhhhhccCccCCcccCccchhhHHHHhhhHHHHHHHHHHHHhhccCceEEEEecCCceee Q lcl|Aclame:pro 1 MLLANGQTLSAPAMAELSPQMQDSYYYAPAVGMQLERQFSLYGGIYKNQPWVRTVIAKRAQALARLPVKCMFTSGDTETE 80 (518) Q Consensus 1 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~v~~ia~~ia~lp~~v~~~~~~~~~~ 80 (518) -+|++...... ... . .....++.+.++++++|++||++||++||++|+++++++ .. T Consensus 6 ~l~~~~~~~~~-----~~~---------~------~~~~~~~~~~~l~~~~v~~~i~~Ia~~ia~~p~~~~~~~----~~ 61 (376) T protein:vir:78 6 ELFKRNKEIEW-----MWD---------L------DFLEDKTTKVYLKKMALNTCVKHIARTIAKSDFRLKNGE----TS 61 (376) T ss_pred hhhccCCcccc-----ccc---------h------hhccccchhhhhhhHHHHHHHHHHHHhhcccceeecccc----cc Confidence 33443221100 000 0 011223456788999999999999999999999998643 45 Q ss_pred ecchHHHHHhhccCccCCHHHHHHHHHHHHHHcCCeeEEeeeCCCCceeeeeeeCCcceEEEeccCcceEEEEeeccCCC Q lcl|Aclame:pro 81 EHDTGYAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQKNKSGTPEKLMPMHPSRVAIKRNSRTGRYEYYFQAGAGV 160 (518) Q Consensus 81 ~~~~~~~~l~~~PN~~~t~~~f~~~~~~~~ll~G~~~~~i~~~~~G~~~~l~~l~p~~v~~~~~~~~~~~~~~~~~~~~~ 160 (518) .+|+.+++|+.+||++||+++||+.++.+++++||+|+++.++..|.+..++|+.+..+..... +.+...+ T Consensus 62 ~~~~l~~ll~~~PN~~~t~~~f~~~~~~~lll~Gn~~~~~~r~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~-- 132 (376) T protein:vir:78 62 VRDKLYYKLNIRPNTDMSSSSFWEKVIYKLIYDNECLIVLSDTDDFLIADSYVRKEFAFFPDVF-------EGVTVKD-- 132 (376) T ss_pred ccchHHHHHhhccccCCCHHHHHHHHHHHHhHcCcEEEEEEeCCCeeeccceeecccceeeeee-------eeeeeec-- Confidence 5677788888999999999999999999999999999999999999999999999887654332 1222111 Q ss_pred CceeEEEeeeeeEEeecCCCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHccCCcceeeeeCCcCCHHHHHHHHHHHH Q lcl|Aclame:pro 161 GTQLVSFADDEVVPIRFFNPDGLERGLSLMESLKSTIFSEDSSRNATAAMWKNAGRPNLVLRHEKRLSPEAQQRLREQFD 240 (518) Q Consensus 161 ~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~p~gil~~~~~~~~e~~~~~~~~~~ 240 (518) .+....|++++||||++....+..++.+++..+...+... ....++.++.++.+++..+..+++++.+++++.|+ T Consensus 133 ~~~~~~~~~~evih~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~ 207 (376) T protein:vir:78 133 YRYNRNFSMDDVIFLEYGNERLSAFTDGMFEDYGELFGKM-----IRAQMRNFQIRGAVNFKMAGVADKDKQTKLQEYID 207 (376) T ss_pred ceeeeeeccccEEEeccCCCCchhhhhHHHHHHHHHHHHH-----HHHHHhcCCCceeEEEccCCCCCHHHHHHHHHHHH Confidence 1223568999999999877655444444433333222211 12233445556666677788899999999999999 Q ss_pred HHhcCcc-ccccceeccCCcccccccCChhhH-----HHHHHHHHHHHHHHHHhccchHhhccccccccccHHHHHHHHH Q lcl|Aclame:pro 241 RAHAGSS-NTGKTMVVEEGMEPIPLQLTAVEM-----QFIEARQLNREEVCGVYDIAPPIVHILDRATFSNISAQMRAFY 314 (518) Q Consensus 241 ~~~~g~~-n~g~~~vl~~g~~~~~~~~~~~d~-----q~~e~~~~~~~~Ia~~fgVpp~~lg~~~~~~~s~~e~~~~~~~ 314 (518) +.++|.. +.++++++++|++|+++++++.++ ||+|.+++++++||++|||||+++| ++++|+|++.+.|+ T Consensus 208 ~~~~g~~~~~~~v~~l~~g~~~~~l~~~~~~~~~~~~q~~e~~~~~~~~Ia~~fgVPp~~l~----~~~s~~e~~~~~f~ 283 (376) T protein:vir:78 208 KVYASFNNNEIAIVPQLEGFNYEEFGTTSVNNSQSFDEVKKLRKEMIDYVASILGIPSSLLH----GDMADLSNNMKAYM 283 (376) T ss_pred HHhccccccCcceEEcCCCceEEeeccCccccchhHHHHHHHHHHHHHHHHHHhCCCHHHhC----CCCCCHHHHHHHHH Confidence 9999864 455577899999999999888664 9999999999999999999999996 47889999999999 Q ss_pred HHHHHHHHHHHHHHHHhhhcchhhccceeeechhhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHHhCCCCCCccCceee Q lcl|Aclame:pro 315 RDTMAIPIARIQSAMDKYVGQYWVRKNRMKFDIDDVIQPDWEAKSESTQKMVNSGVATPNEGREIMGLPRSDDPKADELY 394 (518) Q Consensus 315 ~~~l~P~~~~ie~~ln~~l~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~T~NE~R~~~g~~pi~~~~gD~~~ 394 (518) ++||.|++.+||++||++|+++. .+.++|+++.+++.|.+++++.+++++++|++|+||+|+++|+||+++++||+++ T Consensus 284 ~~~l~P~~~~ie~~l~~kll~~~--~~~~~~~~~~ll~~d~~~~~~~~~~~~~~G~~t~NE~R~~lg~~p~~~g~~d~~~ 361 (376) T protein:vir:78 284 EYCIDPLTKKLEDELNAKLFTFS--EFLAGEHIKIIHKKDIIENAEAVDKLVASGSFNRNEVRELLGAERVDNPELDKYL 361 (376) T ss_pred HHHHHHHHHHHHHHHHhhhCCcc--cceecccchhhcccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCCceee Confidence 99999999999999999999864 3567788888999999999999999999999999999999999999988899999 Q ss_pred ecccccccccccccC Q lcl|Aclame:pro 395 ANSALQPLGATPDGA 409 (518) Q Consensus 395 ~~~n~~~~~~~~~~~ 409 (518) +|+|++|++..++.. T Consensus 362 ~~~n~~~~~~~~e~g 376 (376) T protein:vir:78 362 ITKNYQSADEGGEDG 376 (376) T ss_pred eccCceehhccccCC Confidence 999999987543222 No 79 >protein:vir:1082 Length: 359 # NCBI annotation: portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:21 # MgeName: bIL309 # Cross-refs: genbank:acc:NP_076736;genbank:gi:13095846;genbank:GeneID:920394 Probab=100.00 E-value=2.9e-75 Score=429.21 Aligned_cols=350 Identities=15% Similarity=0.207 Sum_probs=282.2 Q ss_pred CCCCCCCCCccccccccchhhhhhh-ccCccCCcccCccchhhHHHHhhhHHHHHHHHHHHHhhccCceEEEEecCCcee Q lcl|Aclame:pro 1 MLLANGQTLSAPAMAELSPQMQDSY-YYAPAVGMQLERQFSLYGGIYKNQPWVRTVIAKRAQALARLPVKCMFTSGDTET 79 (518) Q Consensus 1 ~~f~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~v~~ia~~ia~lp~~v~~~~~~~~~ 79 (518) -+|.+-.....+ ...+|..... ++.... ...+....++++++|++||++||++||++|+. T Consensus 2 ~~~~~f~~r~~~---~~~~~~~~~~~~~~~~~------~~~v~~~~al~~~av~~cv~~ia~~ia~~p~~---------- 62 (359) T protein:vir:10 2 SILNPFERRSSI---TPNNYYPFMVQNGSIVP------NSLVDATEALKNSDLYAVTSLISSDIAGTRFI---------- 62 (359) T ss_pred cccchhhccccC---CCCcchhhhhccccccC------CcccCHHHhhcchHHHHHHHHHHHhhhcCccc---------- Confidence 233211111111 1112222222 122222 23345567889999999999999999999983 Q ss_pred eecchHHHHHhhccCccCCHHHHHHHHHHHHHHcCCeeEEeeeCCCCceeeeeeeCCcceEEEeccCcceEEEEeeccCC Q lcl|Aclame:pro 80 EEHDTGYAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQKNKSGTPEKLMPMHPSRVAIKRNSRTGRYEYYFQAGAG 159 (518) Q Consensus 80 ~~~~~~~~~l~~~PN~~~t~~~f~~~~~~~~ll~G~~~~~i~~~~~G~~~~l~~l~p~~v~~~~~~~~~~~~~~~~~~~~ 159 (518) .++.++.|+.+||++||+++||+.++.+++++||+|++|+++.+|++.+|+|++|++|++..+.+ ...|.+.. . T Consensus 63 --~~~~~~~L~~~PN~~~t~~~f~~~~~~~lll~Gnay~~i~r~~~g~~~~l~~l~~~~v~i~~~~~--~~~y~~~~--~ 136 (359) T protein:vir:10 63 --GNQVFTSVLNNPSHLTNAFSFWQTAILNLLLNGNVFLAILKGDNSLMKELRLIPSNAITIDLTDD--TLTYEVNQ--F 136 (359) T ss_pred --cchHHHHHhhcccccCCHHHHHHHHHHhccccCceEEEEEECCCCeEEEEEEeCCceEEEEEcCC--eEEEEEEe--c Confidence 57788999999999999999999999999999999999999999999999999999999977643 35565543 2 Q ss_pred CCceeEEEeeeeeEEeecCCC----CcccccchHHHHHHHHHHHHHHHHHHHHHHHHccCCcceeeeeCC-cCCHHHHHH Q lcl|Aclame:pro 160 VGTQLVSFADDEVVPIRFFNP----DGLERGLSLMESLKSTIFSEDSSRNATAAMWKNAGRPNLVLRHEK-RLSPEAQQR 234 (518) Q Consensus 160 ~~~~~~~~~~~~vih~~~~~~----~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~p~gil~~~~-~~~~e~~~~ 234 (518) .++..+.|++++||||++++. .+..+|+||+..+...+....+++++..++|+||++|+|+|++++ .+++++.++ T Consensus 137 ~~~~~~~~~~~evih~~~~~~~~~~~dg~~G~spi~~~~~~i~~~~~~~~~~~~~f~ng~~~~gil~~~~~~l~~e~~~~ 216 (359) T protein:vir:10 137 DDYPSAKYNASEMIHVKIMAYGVDTLHNLVGHSPLESLTSEIGQQKEANRLSLSTLKGALNPTSVVKVPQGTLSSEAKDS 216 (359) T ss_pred CCceEEEEcccceEEeccCCCCCCccCccccccHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEeCCCCCCHHHHHH Confidence 345567899999999998764 245689999999999999999999999999999999999999986 689999999 Q ss_pred HHHHHHHHhcCccccccceeccCCcccccccCChhhHHHHHHHHHHHHHHHHHhccchHhhcccc--ccccccHHHHHHH Q lcl|Aclame:pro 235 LREQFDRAHAGSSNTGKTMVVEEGMEPIPLQLTAVEMQFIEARQLNREEVCGVYDIAPPIVHILD--RATFSNISAQMRA 312 (518) Q Consensus 235 ~~~~~~~~~~g~~n~g~~~vl~~g~~~~~~~~~~~d~q~~e~~~~~~~~Ia~~fgVpp~~lg~~~--~~~~s~~e~~~~~ 312 (518) +++.|++.++ ..|+|+++||++|++|+++++++.|+||+|.+++++++||++|||||++||.++ .+++++.+++... T Consensus 217 ~~~~~~~~~~-~~n~g~~~vl~~g~~~~~l~~~~~d~q~le~~~~~~~~Ia~~fgVPp~~lg~~~~~~~~~~~~e~~~~~ 295 (359) T protein:vir:10 217 IRKEFEKANG-GNNSGRVMVLDQSADFSTVSINADVANYLNSMNWGRTQIAKAFGVSDSYLNGTGDQQSSLDQIKDLYVN 295 (359) T ss_pred HHHHHHHHhC-ccccCCceecCCCcceeeecCCHHHHHHHHHHHHHHHHHHHHhCCCHHHhCCCCcccccHHHHHHHHHH Confidence 9999988765 489999999999999999999999999999999999999999999999998754 3467777888888 Q ss_pred HHHHHHHHHHHHHHHHHHhhhcchhhccceeeechhhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHHhCCCCC Q lcl|Aclame:pro 313 FYRDTMAIPIARIQSAMDKYVGQYWVRKNRMKFDIDDVIQPDWEAKSESTQKMVNSGVATPNEGREIMGLPRSD 386 (518) Q Consensus 313 ~~~~~l~P~~~~ie~~ln~~l~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~T~NE~R~~~g~~pi~ 386 (518) |+..+|.|+...|+..|++.+. ++...+...|.......+.+++++|++|+||+|+++|++|+= T Consensus 296 ~l~~~l~p~~~~l~~~l~~~~~----------~~~~~~~~~d~~~~~~~~~~~~~~G~~t~NE~R~~l~~~pv~ 359 (359) T protein:vir:10 296 ALNRFIEPLISELRIKCDSSIG----------VDMSPITDYSNSVFKADILNWVKEGIIEPTEAKTLLESKGII 359 (359) T ss_pred HHHHHHHHHHHHHHHHhhhhhc----------ccchhhhhcCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCC Confidence 8888888888877777766542 333334444555556667889999999999999999999994 No 80 >protein:vir:9641 Length: 395 # NCBI annotation: portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:173 # MgeName: 315.1 # Cross-refs: genbank:acc:NP_795403;genbank:gi:28876176;genbank:GeneID:1257709 Probab=100.00 E-value=3.3e-75 Score=428.93 Aligned_cols=379 Identities=12% Similarity=0.047 Sum_probs=281.6 Q ss_pred CCCCCCCCCccccccccchhhhhhhccCccCCcccCccchhhHHHHhhhHHHHHHHHHHHHhhccCceEEEEecCCceee Q lcl|Aclame:pro 1 MLLANGQTLSAPAMAELSPQMQDSYYYAPAVGMQLERQFSLYGGIYKNQPWVRTVIAKRAQALARLPVKCMFTSGDTETE 80 (518) Q Consensus 1 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~v~~ia~~ia~lp~~v~~~~~~~~~~ 80 (518) ..|+++.....+. .+ .......++.+.|+++++|++||++||++||++||++++++. ... T Consensus 5 d~~~~~~~~~~~~-----~~-------------~~~~~~~~~~~~~l~~~~v~~~i~~Ia~~ia~lp~~v~~~~~--~~~ 64 (395) T protein:vir:96 5 DFFSFKKSGTLSD-----DD-------------SGSTTSEKLTNVVLKEDALYKCVNYLARIISKSTFRIKAPEK--LTE 64 (395) T ss_pred hhhcCCCCccccc-----cc-------------cccchhhhcchhhhhhHHHHHHHHHHHHhhccceeEEEeCCc--ccc Confidence 1222222111110 00 001112345577899999999999999999999999997643 334 Q ss_pred ecchHHHHHhhccCccCCHHHHHHHHHHHHHHcCCeeEEeeeCCCCceeeeeeeCCcceEEEeccCcceEEEEeeccCCC Q lcl|Aclame:pro 81 EHDTGYAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQKNKSGTPEKLMPMHPSRVAIKRNSRTGRYEYYFQAGAGV 160 (518) Q Consensus 81 ~~~~~~~~l~~~PN~~~t~~~f~~~~~~~~ll~G~~~~~i~~~~~G~~~~l~~l~p~~v~~~~~~~~~~~~~~~~~~~~~ 160 (518) .+++..++|+.+||++||+++||+.++.+++++||+|+++.++..+.+...++.... . . ...++.+...+ T Consensus 65 ~~~~~~~lL~~~PN~~~t~~~f~~~l~~~lll~Gna~~~~~~~~~~~~~~~~~~~~~-----~--~-~~~~~~v~~~~-- 134 (395) T protein:vir:96 65 NQKDWLYWINTKANPNQSASQFWVEVVQKLLVDGETLIFVIPGKGIYVADAFTQDKK-----L--S-GNKFKVSRVQG-- 134 (395) T ss_pred ccchHHHHHhhcCCCCCCHHHHHHHHHHHHhhcCceEEEEEcCCceecCCccccccc-----c--c-cceeeeeeecc-- Confidence 556667777789999999999999999999999999999988754333222221111 0 0 11122222211 Q ss_pred CceeEEEeeeeeEEeecCCCCcccccchHHHHHHHHHHHH------HHHHHHHHHHHHccCCcceeeeeCCcCCHHHHHH Q lcl|Aclame:pro 161 GTQLVSFADDEVVPIRFFNPDGLERGLSLMESLKSTIFSE------DSSRNATAAMWKNAGRPNLVLRHEKRLSPEAQQR 234 (518) Q Consensus 161 ~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~------~~~~~~~~~~~~ng~~p~gil~~~~~~~~e~~~~ 234 (518) ......+++++|||||++++....++.+++......+... ..+.++..++|.+|+.+.+++..+....++..++ T Consensus 135 ~~~~~~~~~~dvih~k~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (395) T protein:vir:96 135 QTYEKIFTFDQVIYLKNDNSDLMLKVESLWEEYGELLGHVINNQKIANQIRFTMTPPKDKVRERAQENSDGGRQPKSDKD 214 (395) T ss_pred ceeeeEeccCceEEecccCCccccccccccchHHHHHHHHHHHHHHHHHHHHHhhhcccccccceeeccCchhhHHHHHH Confidence 2224578999999999988766555555544444433333 3344678899999999999999888777776666 Q ss_pred HHHHHHHHhcCccccccceeccCCcccccccCChhhHHHHHHHHHH------HHHHHHHhccchHhhccccccccccHHH Q lcl|Aclame:pro 235 LREQFDRAHAGSSNTGKTMVVEEGMEPIPLQLTAVEMQFIEARQLN------REEVCGVYDIAPPIVHILDRATFSNISA 308 (518) Q Consensus 235 ~~~~~~~~~~g~~n~g~~~vl~~g~~~~~~~~~~~d~q~~e~~~~~------~~~Ia~~fgVpp~~lg~~~~~~~s~~e~ 308 (518) +.+.+.+...+ +.++++++++|++|++++.++.|+|++|.+++. +++||++|||||++|| ++++|.|+ T Consensus 215 ~~~~~~~~~~~--~~~~v~~l~~g~~~~~l~~~~~d~q~~e~~~~~~~~~~~~~eIa~~fgVPp~~l~----~~~sn~e~ 288 (395) T protein:vir:96 215 FFKRTIEKIRT--ESVVGIPVTANTNYEEYGSKNTGSVKSYVDDIKKLKDQYMAEFAEMLGIPISLLH----GDIADNQK 288 (395) T ss_pred HHHHHHHHhhc--CCcceEEccCCceeEecccChhhhhhhhHHHHHHHHHHHHHHHHHHhCCCHHHhc----CCCccHHH Confidence 65555554432 456788899999999999999999999988765 5799999999999996 47899999 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhcchhhccceeeechhhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHHhCCCCCCc Q lcl|Aclame:pro 309 QMRAFYRDTMAIPIARIQSAMDKYVGQYWVRKNRMKFDIDDVIQPDWEAKSESTQKMVNSGVATPNEGREIMGLPRSDDP 388 (518) Q Consensus 309 ~~~~~~~~~l~P~~~~ie~~ln~~l~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~T~NE~R~~~g~~pi~~~ 388 (518) +.+.|+++||.||+.+||++|+++|+++.++..+++|+++.++++|.+++++.+++++++|++|+||+|+++|+||+++| T Consensus 289 ~~~~f~~~~L~P~~~~ie~~l~~~Ll~~~e~~~~~~f~~~~l~~~d~~~~~~~~~~~~~~G~~T~NE~R~~~gl~pi~~~ 368 (395) T protein:vir:96 289 NYELLLEGPIESLITNIVDGLEYAIFDKSETLEGSFIKVTGLKNYDLFSISSQADKLISSGFVFIDEVREEIGLPELPDG 368 (395) T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCChhhhcCceeEeecchhccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCC Confidence 99999999999999999999999999877666666788899999999999999999999999999999999999999999 Q ss_pred cCceeeecccccccccccccCCCCCCCCCCCCc Q lcl|Aclame:pro 389 KADELYANSALQPLGATPDGAVEGEEAPAPKRP 421 (518) Q Consensus 389 ~gD~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~ 421 (518) +||++++|+|++|++..++. .+ ...++ T Consensus 369 ~gD~~~~~~N~~~~~~~gge--~~----~~~~~ 395 (395) T protein:vir:96 369 LGKVLYMTKNYESVLERGGE--VD----EEVET 395 (395) T ss_pred CCceeeecccceechhccCC--CC----CCCCC Confidence 99999999999998753211 00 00000 No 81 >protein:vir:79772 Length: 648 # NCBI annotation: portal protein # Family: family:all:3222 # MgeID: mge:1874 # MgeName: 0305phi8-36 # Cross-refs: genbank:acc:YP_001429612;genbank:gi:156564103;genbank:GeneID:5525537 Probab=100.00 E-value=4.4e-72 Score=411.81 Aligned_cols=500 Identities=12% Similarity=0.072 Sum_probs=313.7 Q ss_pred CCCCC-------------------CCCCc---------cccccccch------hhhhhhccCccCCcccCccchhhHHHH Q lcl|Aclame:pro 1 MLLAN-------------------GQTLS---------APAMAELSP------QMQDSYYYAPAVGMQLERQFSLYGGIY 46 (518) Q Consensus 1 ~~f~~-------------------~~~~~---------~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 46 (518) -+|.| .+.+- ...-+.... .+...+++ ...-.....++....+++ T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~d~~~~~~~r~g~~~~~~~~g-~~~~~epp~d~~~l~~l~ 93 (648) T protein:vir:79 15 SLMWRDEDDDKEPLVLEESMQLGEAPGAMPKGGGGGGSAKRDPKMSLVKRIGLAIMDGGGG-GRDFEEPEFDFNEITSAY 93 (648) T ss_pred hhhccCccccccccccccccccCCCccccCCCCcccccccccchhHHHHHhHHHHHhhcCC-ccccccCCcCHHHHHHHH Confidence 11222 11110 000000000 11111111 111122334566667788 Q ss_pred hhhHHHHHHHHHHHHhhccCceEEEEecCCceeeecchHHHHHhhccCccCCHHHHHHHHHHHHHHcCCeeEEeeeCCCC Q lcl|Aclame:pro 47 KNQPWVRTVIAKRAQALARLPVKCMFTSGDTETEEHDTGYAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQKNKSG 126 (518) Q Consensus 47 ~~~~~v~~~v~~ia~~ia~lp~~v~~~~~~~~~~~~~~~~~~l~~~PN~~~t~~~f~~~~~~~~ll~G~~~~~i~~~~~G 126 (518) ..+++|++||++||++||++||.++.+++. .........++.+||+++|+++|++.++.+++++||+|++++++.+| T Consensus 94 ~~np~V~~aI~iia~~ia~l~~~i~~~~~~---~~~~~~~~~ll~rPn~~~t~~~f~~~l~~~lll~GNAYveiiRd~~G 170 (648) T protein:vir:79 94 NTEGYVRQAVDKYIEMMFKADWDFVSKNPN---AVEYIRMRFTLMAEATQIPTNQLFIEIAEDLVKYCNVVIAKSRAKDA 170 (648) T ss_pred hcChHHHHHHHHHHHHHhhCcceEEecCCc---cchhhHHHHHhhccCCCCCHHHHHHHHHHHHHhcCCeEEEEEecCCC Confidence 899999999999999999999998765532 23334455677899999999999999999999999999999999887 Q ss_pred c---------------eeeeeeeCCcceEEEeccCcceEEEEeeccCCCCceeEEEeeeeeEEeecCCCCcccccchHHH Q lcl|Aclame:pro 127 T---------------PEKLMPMHPSRVAIKRNSRTGRYEYYFQAGAGVGTQLVSFADDEVVPIRFFNPDGLERGLSLME 191 (518) Q Consensus 127 ~---------------~~~l~~l~p~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~ 191 (518) . +.++||++|.+|++..+.++....|.|... .++..+.|++++||||+++++.+.+||+||+. T Consensus 171 ~~~~~l~~~~~~~~~~v~~l~pl~p~~v~v~~d~~g~~~~Y~y~~~--g~~~~~~~~~~dIIHik~~~~~d~~~GlSpi~ 248 (648) T protein:vir:79 171 LPFQGMNVMGVGDSMPVAGYFPLNLASMKVKRDKFGMIKGWQQEQE--GQDKPQKFKPEDIVHIYYKREKGRAFGTPWLL 248 (648) T ss_pred ccchhhhhhhhccccceeeeEeecCceeEEEEcCCCceeeeEEEec--CCceeEEecCccEEEEccCCCCCCceeccHHH Confidence 3 478999999999999988887777776543 34566789999999999887777789999999 Q ss_pred HHHHHHHHHHHHHHHHHHHHHccCCcceeeeeCC-cCCHHHHHHHHHHHHHHhcCccccccceeccCCccccccc----C Q lcl|Aclame:pro 192 SLKSTIFSEDSSRNATAAMWKNAGRPNLVLRHEK-RLSPEAQQRLREQFDRAHAGSSNTGKTMVVEEGMEPIPLQ----L 266 (518) Q Consensus 192 ~~~~~i~~~~~~~~~~~~~~~ng~~p~gil~~~~-~~~~e~~~~~~~~~~~~~~g~~n~g~~~vl~~g~~~~~~~----~ 266 (518) .++.+|....++++|..++|+||++|+++++++. ....++.+++++.|.+.+.+. .+.++++++..+. . T Consensus 249 ~a~~aI~l~~aa~~~~~~fF~NGa~P~gil~~~~~~~~~e~~k~~~e~~~~~~~~~------~i~gg~v~~~~~~i~~~~ 322 (648) T protein:vir:79 249 PALDDIRALRQVEENVLRLVYRNLHPLWHVKVGLEQEGFGAEEGEVDLVRGEVENM------DVEGGMVTTERVNISSIA 322 (648) T ss_pred HHHHHHHHHHHHHHHHHHHHhccCCccEEEEeCCCccchHHHHHHHHHHHHhcccc------cccccccccceeeccccC Confidence 9999999999999999999999999999999863 345566777777787776543 2233333333332 2 Q ss_pred ChhhHHHHHHHHHHHHHHHHHhccchHhhccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHhhhc----ch------ Q lcl|Aclame:pro 267 TAVEMQFIEARQLNREEVCGVYDIAPPIVHILDRATFSNISAQMRAFYRDTMAIPIARIQSAMDKYVG----QY------ 336 (518) Q Consensus 267 ~~~d~q~~e~~~~~~~~Ia~~fgVpp~~lg~~~~~~~s~~e~~~~~~~~~~l~P~~~~ie~~ln~~l~----~~------ 336 (518) +++|+||++++++++++||++|||||++||+.+++++++.+++... +..++.|++..++..++..+. .. T Consensus 323 s~~dlqfle~rk~~~~eIa~aFgVPP~lLG~~~~ss~stae~~~~~-~~~~i~~l~~~i~~~le~~~~~~ll~e~~l~~~ 401 (648) T protein:vir:79 323 SNQIIDAKEYLKHFEQRAFTVLGVSELMMGRGGTASRSTGDNLSSD-FKDRIKALQKVMATFINEFMVKEILMEGGFDPV 401 (648) T ss_pred CHHHHHHHHHHHHHHHHHHHHhCCCHhHcccCCCccchHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHhhhhhcccc Confidence 5689999999999999999999999999999888888888776654 566788877766655544332 11 Q ss_pred hhccceeeechhhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHHhCCCCCCccCceeeecccccccccccccCCCCCCCC Q lcl|Aclame:pro 337 WVRKNRMKFDIDDVIQPDWEAKSESTQKMVNSGVATPNEGREIMGLPRSDDPKADELYANSALQPLGATPDGAVEGEEAP 416 (518) Q Consensus 337 ~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~T~NE~R~~~g~~pi~~~~gD~~~~~~n~~~~~~~~~~~~~~~~~~ 416 (518) ....++++|+++++++.|.+++++.+.+++.+||||+||+|+++||+|++++ .+..++..++.+.......... ++.+ T Consensus 402 l~~d~~ieF~~~~Llr~D~~~~a~~~~~l~~~GilT~NEaR~~lGlpPi~~g-~~~~~l~~~~~~~~~~~~~~~~-~~~~ 479 (648) T protein:vir:79 402 LNPDDKVEFRFNEIDMDSKIKLENQAVFLYEHNAISEDEMRELIGRDPVDDG-EGRAKMHLQMVTIAQATALAAL-APTP 479 (648) T ss_pred ccccceEEEeecccchhhHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCC-CCccccccccccchhccccccC-CCCC Confidence 1234578999999999999999999999999999999999999999999853 3344555565554332211110 0000 Q ss_pred CCC--CcccCCCCCcc---CCccccccccChh---hh-cc------hhHHHHHHHHHHhhccCcch----hHHHHHHHHH Q lcl|Aclame:pro 417 APK--RPASTPVASLD---QSPPASVPGLSPT---NS-DR------STDSGKTEPRRLMQKPPPKE----SSPKHLRAVK 477 (518) Q Consensus 417 ~~~--~~~~~~~~~~~---~~~~~~~~~~~~~---~~-~~------~~~~~~~~~~~~~~k~~~~~----~~~~~~~~~~ 477 (518) ... ..++......+ .+.+....+.++. ++ .+ ......++.-.. -++..+. .+-.|++.++ T Consensus 480 ~~~~~~~a~~eg~~~e~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 558 (648) T protein:vir:79 480 AGGSSASASGDKKKKATDNKTKPTNQHGTKTSPKKQTNGRHVRYMQEMLLEYTTLNEA-IKALIERYYQYGSKEHLKSIN 558 (648) T ss_pred CCCCCCCccccccccccCCCCCCCCCCCcCCCCccccchhhhhhhhhhhhcchhhhHH-HhhHHHHHHHHhHHHHHHhhh Confidence 000 00000000000 0000000000000 00 00 000011111110 1111111 1223344444 Q ss_pred HHhhhh--------hhhcccccchhhhh---h-hHHHHHHHHHHHHhhhcccC Q lcl|Aclame:pro 478 GAMGRG--------KDIKGFALQLAEKY---P-DDLEDILLAVQLALAERKDN 518 (518) Q Consensus 478 ~~~~~~--------~~~~~~~~~~~~~~---~-~~~~~~~~~~~~~~~~~~~~ 518 (518) +.+... ...++ .+.++.. - +-.+.+.-+.+.-+.+.+-+ T Consensus 559 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 609 (648) T protein:vir:79 559 GSLMYTEGRLLELTTQYWG--EEVTEKVRIPFHRMTENLREEVMSTIDKVEGV 609 (648) T ss_pred hhheeccchhHHHHHHHhh--hhhhceeeeeHHHHHHHHHHHHHhhhhhhhhh Confidence 443331 11111 1111111 1 22245555555556666655 No 82 >protein:vir:94002 Length: 378 # NCBI annotation: putative portal protein # Family: family:all:2379 # MgeID: mge:1487 # MgeName: jj50 # Cross-refs: genbank:acc:YP_764318;genbank:gi:115315632;genbank:GeneID:5176589 Probab=100.00 E-value=2.3e-73 Score=418.78 Aligned_cols=359 Identities=14% Similarity=0.088 Sum_probs=269.4 Q ss_pred CCCCCCCCCccccccccchhhhhhhccCccCCcccCccchhhHHHHhhhHHHHHHHHHHHHhhccCceEEEEecCCce-- Q lcl|Aclame:pro 1 MLLANGQTLSAPAMAELSPQMQDSYYYAPAVGMQLERQFSLYGGIYKNQPWVRTVIAKRAQALARLPVKCMFTSGDTE-- 78 (518) Q Consensus 1 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~v~~ia~~ia~lp~~v~~~~~~~~-- 78 (518) =+|++-.+-....+ +.-.. ++. .-.....++++++|++||++||++||++|+++++...++. T Consensus 2 g~f~~~~~~~~~~~----~~~~~----------~~~--~~~~~~~~~~~~~v~~~v~~IA~~iA~lp~~~~~~~~~~~~~ 65 (378) T protein:vir:94 2 NLFGKVVSFSRGKL----NNDTQ----------RVT--AWQNEAVEYTSAFVTNIHNKIANEITKVEFNHVKYKKSDVGS 65 (378) T ss_pred Cccccchhcccccc----cCCcc----------eee--eeccchhHHHHHHHHHHHHHHHhhhhhCceeeEEEcccCccc Confidence 24444332111100 00000 000 0111235668899999999999999999999887654431 Q ss_pred ----eeecchHHHHHhhccCccCCHHHHHHHHHHHHHHcCCeeEEeeeCC-CCceeeeeeeCCcceEEEeccCcceEEEE Q lcl|Aclame:pro 79 ----TEEHDTGYAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQKNK-SGTPEKLMPMHPSRVAIKRNSRTGRYEYY 153 (518) Q Consensus 79 ----~~~~~~~~~~l~~~PN~~~t~~~f~~~~~~~~ll~G~~~~~i~~~~-~G~~~~l~~l~p~~v~~~~~~~~~~~~~~ 153 (518) ...+|+.+++|+.+||++||+++||+.++.+++++||+|++++++. .|+++.++|.. T Consensus 66 ~~~~~~~~~~l~~lL~~~PN~~~t~~~f~~~~~~~lll~Gna~i~~~~~~~~g~~~~l~p~~------------------ 127 (378) T protein:vir:94 66 DTLISMAGSDLDEVLNWSPKGERNSMDFWRKVIKKLLSAPYVDLYAVFDDNTGELLDLLFAD------------------ 127 (378) T ss_pred ccccccccchHHHHHhhcCCCCCCHHHHHHHHHHHHhhcCceEEEEEeeCCCceEEEEEecC------------------ Confidence 1234566666667999999999999999999999999999877654 46666655421 Q ss_pred eeccCCCCceeEEEeeeeeEEeecCCCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHccCCcceeeeeCCcCCHHHHH Q lcl|Aclame:pro 154 FQAGAGVGTQLVSFADDEVVPIRFFNPDGLERGLSLMESLKSTIFSEDSSRNATAAMWKNAGRPNLVLRHEKRLSPEAQQ 233 (518) Q Consensus 154 ~~~~~~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~p~gil~~~~~~~~e~~~ 233 (518) ..+.|++++||||+++ .+...|+||+..+...+... +++ +.++|+|+++..+++++.+ T Consensus 128 ---------~~~~~~~~diiH~~~~--~~~~~g~s~l~~~~~~i~~~----------~~~-~~~~gil~~~~~l~~~~~~ 185 (378) T protein:vir:94 128 ---------DKKEYKPEELVRLTSP--FYINEDTSILDNALASIQTK----------LEQ-GKLRGLLKINAFLDIDNTQ 185 (378) T ss_pred ---------CeeEeeeeeeEEecCc--CCccchhHHHHHHHHHHHHH----------Hhc-ccccceeeeCCcCCHHHHH Confidence 1245788999999965 34456999999888776532 333 5689999999999988877 Q ss_pred HHHHHHHHHhc---CccccccceeccCCcccccccCChhhHHHHHHHHHHHHHHHHHhccchHhhccccccccccHHHHH Q lcl|Aclame:pro 234 RLREQFDRAHA---GSSNTGKTMVVEEGMEPIPLQLTAVEMQFIEARQLNREEVCGVYDIAPPIVHILDRATFSNISAQM 310 (518) Q Consensus 234 ~~~~~~~~~~~---g~~n~g~~~vl~~g~~~~~~~~~~~d~q~~e~~~~~~~~Ia~~fgVpp~~lg~~~~~~~s~~e~~~ 310 (518) ++++.|.+.+. +..|+|+++++++|++|++++.++.++|+ +.+++++++||++|||||.+|+. ++.+++. T Consensus 186 ~~~~~~~~~~~~~~~~~~~g~~~vl~~g~~~~~l~~~~~~~~~-~~~~~~~~~Ia~~fgVP~~~l~~------~~se~~~ 258 (378) T protein:vir:94 186 EYREKALTTIKNMQEGSSYNGLTPVDNKTEIVELKKDYSVLNK-DEIDLIKSELLTGYFMNENILLG------TASQEQQ 258 (378) T ss_pred HHHHHHHHHHHHhhcccccccceecCCCceEEEccCChhhhhH-HHHHHHHHHHHHHhCCCHHHhcC------ChHHHHH Confidence 77777776653 34678999999999999999999999997 56789999999999999999942 3458899 Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhcchhhcc--------ceeeechhhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHHhC Q lcl|Aclame:pro 311 RAFYRDTMAIPIARIQSAMDKYVGQYWVRK--------NRMKFDIDDVIQPDWEAKSESTQKMVNSGVATPNEGREIMGL 382 (518) Q Consensus 311 ~~~~~~~l~P~~~~ie~~ln~~l~~~~~~~--------~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~T~NE~R~~~g~ 382 (518) .+|+++||.||+.+||++|+++|+++.++. ..++||++.+++.|.+++++.+++++++||||+||+|+++|| T Consensus 259 ~~f~~~tL~P~~~~ie~~l~~~Ll~~~er~~g~~~~~~~~~~f~~~~l~~~d~~~~~~~~~~~~~~G~~T~NE~R~~~gl 338 (378) T protein:vir:94 259 IYFYNSTIIPLLIQLEKELTYKLISTNRRRVVKGNLYYERIIVDNQLFKFATLKELIDLYHENINGPIFTQNQLLVKMGE 338 (378) T ss_pred HHHHHHHHHHHHHHHHHHHHhhcCChhHhhhhhhcccccceeecchhhhhcCHHHHHHHHHHHHhCCCcCHHHHHHHhCC Confidence 999999999999999999999999875432 237899999999999999999999999999999999999999 Q ss_pred CCCCCccCceeeecccccccccccccCCCCCCCCCCCCcccCCCCCccCCccc Q lcl|Aclame:pro 383 PRSDDPKADELYANSALQPLGATPDGAVEGEEAPAPKRPASTPVASLDQSPPA 435 (518) Q Consensus 383 ~pi~~~~gD~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 435 (518) ||++ |||++++|+|++|++...++....+ ..++. ++..++ T Consensus 339 ~p~~--gGD~~~~~~n~~~~~~~~~~~~~~~--------~~~~~---~e~~n~ 378 (378) T protein:vir:94 339 QPIE--GGDVYIANLNAVAVKNLSDLQGSRK--------DVTST---DETNNQ 378 (378) T ss_pred CCCC--CCCeeeecccccccccchhhcCCcC--------CCCCC---CCCCCC Confidence 9996 8999999999999876654322111 01101 111111 No 83 >protein:vir:98643 Length: 395 # NCBI annotation: putative portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:1601 # MgeName: phi3396 # Cross-refs: genbank:acc:YP_001039921;genbank:gi:126011096;genbank:GeneID:4818479 Probab=100.00 E-value=2.5e-73 Score=418.61 Aligned_cols=381 Identities=12% Similarity=0.054 Sum_probs=284.0 Q ss_pred CC---CCCCCCCccccccccchhhhhhhccCccCCcccCccchhhHHHHhhhHHHHHHHHHHHHhhccCceEEEEecCCc Q lcl|Aclame:pro 1 ML---LANGQTLSAPAMAELSPQMQDSYYYAPAVGMQLERQFSLYGGIYKNQPWVRTVIAKRAQALARLPVKCMFTSGDT 77 (518) Q Consensus 1 ~~---f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~v~~ia~~ia~lp~~v~~~~~~~ 77 (518) =+ |+++.+..... .. .......++.+.++++++|++||++||++||++|+++++.+++ T Consensus 2 Glf~~~~~~~~~~~~~----------~~--------~~~~~~~~~~~~~~~~~~v~~~I~~ia~~iA~lp~~~~~~~~~- 62 (395) T protein:vir:98 2 GILDFFSFKKSGTLSD----------DD--------SGSTTSEKLTNVVLKEDALYKCVNYLARIISKSTFRLKTPEKL- 62 (395) T ss_pred cchhhhcCCCcccccc----------cc--------cchhhhhhcchhhhhhHHHHHHHHHHHHHHhhCceeEEecCCc- Confidence 01 11111110000 00 0111123455678899999999999999999999999986533 Q ss_pred eeeecchHHHHHhhccCccCCHHHHHHHHHHHHHHcCCeeEEeeeCCCCceeeeeeeCCcceEEEeccCcceEEEEeecc Q lcl|Aclame:pro 78 ETEEHDTGYAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQKNKSGTPEKLMPMHPSRVAIKRNSRTGRYEYYFQAG 157 (518) Q Consensus 78 ~~~~~~~~~~~l~~~PN~~~t~~~f~~~~~~~~ll~G~~~~~i~~~~~G~~~~l~~l~p~~v~~~~~~~~~~~~~~~~~~ 157 (518) ...+++..++|+.+||++||+++||+.++.+++++||+|++++++..+.+. +..+.... .. ...++.+... T Consensus 63 -~~~~~~~~~lL~~~PN~~~t~~~f~~~~~~~lll~Gnayi~~~~~~~~~~~------~~~~~~~~-~~-~~~~~~~~~~ 133 (395) T protein:vir:98 63 -TENQKDWLYWINTKANPNQSASQFWVEVIQKLLVDGETLIFVIPGKGIYVA------DSFTQDKK-IS-GSQFKVSRVQ 133 (395) T ss_pred -ccccchHHHHHhhcCCCCCCHHHHHHHHHHHHhhcCceEEEEEeCCceecC------Cccccccc-cc-Ccccceeeec Confidence 344677778888899999999999999999999999999999887543222 11121111 11 1112222221 Q ss_pred CCCCceeEEEeeeeeEEeecCCCCcccccchHHHHHHHHHHHHHH--HHHHHHHHHHccCCcceeeeeCCcC-CHHHHHH Q lcl|Aclame:pro 158 AGVGTQLVSFADDEVVPIRFFNPDGLERGLSLMESLKSTIFSEDS--SRNATAAMWKNAGRPNLVLRHEKRL-SPEAQQR 234 (518) Q Consensus 158 ~~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~--~~~~~~~~~~ng~~p~gil~~~~~~-~~e~~~~ 234 (518) . ....+.+++++|||||+.++++..++.+++......+..... ...+..+++.++..+.+++...... ++++.++ T Consensus 134 ~--~~~~~~~~~~evih~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (395) T protein:vir:98 134 G--QTYEKTFTFDQVIYLKNDNSDLMSKVESLWEEYGELLGHVINNQKIANQIRFTMIPPKDKVRERAQENSDGGRQSKS 211 (395) T ss_pred C--ceeeeEecCccEEEecCCCCCccccccchhhhHHHHHHHHHHHHHHHHHHHHhhccccccccccccccCCcHHHHHH Confidence 1 122467899999999998877766676766666665554443 3444567888888888888766544 5566777 Q ss_pred HHHHHHHHhcCcc-ccccceeccCCcccccccC------ChhhHHHHHHHHHHHHHHHHHhccchHhhccccccccccHH Q lcl|Aclame:pro 235 LREQFDRAHAGSS-NTGKTMVVEEGMEPIPLQL------TAVEMQFIEARQLNREEVCGVYDIAPPIVHILDRATFSNIS 307 (518) Q Consensus 235 ~~~~~~~~~~g~~-n~g~~~vl~~g~~~~~~~~------~~~d~q~~e~~~~~~~~Ia~~fgVpp~~lg~~~~~~~s~~e 307 (518) .++.|++.+.+.. +.++++++++|++|+++++ ++.++||.+.+++++++||++|||||++|| ++++|.| T Consensus 212 ~~~~~~~~~~~~~~~~~~v~~l~~g~~~~~l~~~~~~~~~~~~~q~~e~~~~~~~~Ia~~fgVP~~~l~----~~~sn~e 287 (395) T protein:vir:98 212 DKDFFKRTVEKIRTESVVGIPVTANTNYEEYGSKNTGAVKSYVDDIKKLKDQYMAEFAEMLGIPISLLH----GDIADNQ 287 (395) T ss_pred HHHHHHHHHhhhhcCCcceeecCCCceeEecccccccccChhHHHHHHHHHHHHHHHHHHhCCCHHHhc----CCcccHH Confidence 7778888776643 4556788999999999985 467889999999999999999999999996 5789999 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhcchhhccceeeechhhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHHhCCCCCC Q lcl|Aclame:pro 308 AQMRAFYRDTMAIPIARIQSAMDKYVGQYWVRKNRMKFDIDDVIQPDWEAKSESTQKMVNSGVATPNEGREIMGLPRSDD 387 (518) Q Consensus 308 ~~~~~~~~~~l~P~~~~ie~~ln~~l~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~T~NE~R~~~g~~pi~~ 387 (518) ++.+.|+++||.||+.+||++||++|++..+...+++|+++.+++.|.+++++.+.+++++|++|+||+|+++|+||+++ T Consensus 288 ~~~~~f~~~tl~P~~~~ie~~l~~kll~~~~~~~g~~f~~~~l~~~d~~~~~~~~~~~~~~G~~T~NE~R~~~g~~Pi~~ 367 (395) T protein:vir:98 288 KNYELLLEGPIESLITNIVDGLEYAIFDKSETLQGSFIKVTGLKNYDLFSISNQADKLISSGFVFIDEVREEIGLPELPD 367 (395) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCChhhhcCcceeeehhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCC Confidence 99999999999999999999999999998776666778889999999999999999999999999999999999999998 Q ss_pred ccCceeeecccccccccccccCCCCCCCCCCCCc Q lcl|Aclame:pro 388 PKADELYANSALQPLGATPDGAVEGEEAPAPKRP 421 (518) Q Consensus 388 ~~gD~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~ 421 (518) ++||++++++|++|++..++... ...++ T Consensus 368 ~~gD~~~~~~n~~~~~~~gge~~------~~~~~ 395 (395) T protein:vir:98 368 GLGKVLYMTKNYESVLERGGEVD------EEVET 395 (395) T ss_pred CCCceeeecccceecccccCCCC------CCCCC Confidence 89999999999999875321110 00000 No 84 >protein:vir:93867 Length: 378 # NCBI annotation: putative portal protein # Family: family:all:2379 # MgeID: mge:1479 # MgeName: 712 # Cross-refs: genbank:acc:YP_764264;genbank:gi:115315577;genbank:GeneID:5141561 Probab=100.00 E-value=3.8e-73 Score=417.63 Aligned_cols=360 Identities=14% Similarity=0.066 Sum_probs=269.3 Q ss_pred CCCCCCCCCccccccccchhhhhhhccCccCCcccCccchhhHHHHhhhHHHHHHHHHHHHhhccCceEEEEecCCce-- Q lcl|Aclame:pro 1 MLLANGQTLSAPAMAELSPQMQDSYYYAPAVGMQLERQFSLYGGIYKNQPWVRTVIAKRAQALARLPVKCMFTSGDTE-- 78 (518) Q Consensus 1 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~v~~ia~~ia~lp~~v~~~~~~~~-- 78 (518) |=|.++..+-.... .+....... .-.....+++.++|++||++||++||++|+++++.+.++. T Consensus 1 Mg~f~~~~~f~~~~-------------~~~~~~~~~--~~~~~~~~~~~~~v~~~i~~Ia~~iA~lp~~~~~~~~~~~~~ 65 (378) T protein:vir:93 1 MNLFGKVVSFSRGK-------------LNNDTQRVT--AWQNEAVEYTSAFVTNIHNKIANEITKVEFNHVKYKKSDVGS 65 (378) T ss_pred Cccchhhhhhhccc-------------cCCCcceee--ecccchhHHHHHHHHHHHHHHHhhhhhCceeeEEEccccccc Confidence 43333221111000 000000000 0011235678899999999999999999999998765432 Q ss_pred ----eeecchHHHHHhhccCccCCHHHHHHHHHHHHHHcCCeeEEeeeCCC-CceeeeeeeCCcceEEEeccCcceEEEE Q lcl|Aclame:pro 79 ----TEEHDTGYAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQKNKS-GTPEKLMPMHPSRVAIKRNSRTGRYEYY 153 (518) Q Consensus 79 ----~~~~~~~~~~l~~~PN~~~t~~~f~~~~~~~~ll~G~~~~~i~~~~~-G~~~~l~~l~p~~v~~~~~~~~~~~~~~ 153 (518) ....|+.+++|+.+||++||+++||+.++.+++++||+|++++++.. |+++.++|.. T Consensus 66 ~~~~~~~~~~l~~lL~~~PN~~~t~~~f~~~~~~~lll~Gn~~i~~~~~~~~g~~~~l~~~~------------------ 127 (378) T protein:vir:93 66 DTLISMAGSDLDEVLNWSPKGERNSMDFWRKVIKKLLRAPYVDLYAVFDDNTGELLDLLFAD------------------ 127 (378) T ss_pred ccccccccchHHHHHhhcCCCCCCHHHHHHHHHHHHhhcCceEEEEEeecCCceEEEEEecC------------------ Confidence 12345666677779999999999999999999999999999877643 5555554321 Q ss_pred eeccCCCCceeEEEeeeeeEEeecCCCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHccCCcceeeeeCCcCCHHHHH Q lcl|Aclame:pro 154 FQAGAGVGTQLVSFADDEVVPIRFFNPDGLERGLSLMESLKSTIFSEDSSRNATAAMWKNAGRPNLVLRHEKRLSPEAQQ 233 (518) Q Consensus 154 ~~~~~~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~p~gil~~~~~~~~e~~~ 233 (518) ..++|++++|||+|++ .+...|.|++..+...+. +++++| .++|+|+.+..+++++.+ T Consensus 128 ---------~~~~~~~~diih~r~~--~~~~~~~s~l~~~~~~i~----------~~~~~~-~~~g~l~~~~~l~~~~~~ 185 (378) T protein:vir:93 128 ---------DKKEYKTEELVRLTSP--FYINEDTSILDNALASIQ----------TKLEQG-KLRGLLKINAFLDIDNTQ 185 (378) T ss_pred ---------CeeEeccceeEEecCc--cccchhhHHHHHHHHHHH----------HHHhcC-cccceeeeCCcCCHHHHH Confidence 1246889999999964 344568999888776553 345554 689999999999988877 Q ss_pred HHHHHHHHHhc---CccccccceeccCCcccccccCChhhHHHHHHHHHHHHHHHHHhccchHhhccccccccccHHHHH Q lcl|Aclame:pro 234 RLREQFDRAHA---GSSNTGKTMVVEEGMEPIPLQLTAVEMQFIEARQLNREEVCGVYDIAPPIVHILDRATFSNISAQM 310 (518) Q Consensus 234 ~~~~~~~~~~~---g~~n~g~~~vl~~g~~~~~~~~~~~d~q~~e~~~~~~~~Ia~~fgVpp~~lg~~~~~~~s~~e~~~ 310 (518) ++++.|.+.+. +..++|+++++++|++|++++.++.++|+ +.+++++++||++|||||.+|+ +++.+++. T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~l~~~~~~~~~-~~~~~~~~~Ia~~fgVPp~~l~------g~~~e~~~ 258 (378) T protein:vir:93 186 EYREKALTTIKNMQEGSSYNGLTPVDNKTEIVELKKDYSVLNK-DEIDLIKSELLTGYFMNENILL------GTATQEQQ 258 (378) T ss_pred HHHHHHHHHHHHhhcccccccceEcCCCceEEEccCChhhhhH-HHHHHHHHHHHHHhCCCHHHhc------CCcHHHHH Confidence 77777776543 34578999999999999999999999997 6678999999999999999994 23458999 Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhcchhhcc--------ceeeechhhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHHhC Q lcl|Aclame:pro 311 RAFYRDTMAIPIARIQSAMDKYVGQYWVRK--------NRMKFDIDDVIQPDWEAKSESTQKMVNSGVATPNEGREIMGL 382 (518) Q Consensus 311 ~~~~~~~l~P~~~~ie~~ln~~l~~~~~~~--------~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~T~NE~R~~~g~ 382 (518) ..|+++||.||+++||++||++|++..++. ..++||++.++++|.+++++.+++++++|++|+||+|+++|+ T Consensus 259 ~~f~~~tl~P~~~~ie~~l~~kLl~~~er~~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~G~~t~NE~R~~~gl 338 (378) T protein:vir:93 259 IYFYNSTIIPLLIQLEKELTYKLISTNRRRVVKGNLYYERIIVDNQLFKFATLKELIDLYHENINGPIFTQNQLLVKMGE 338 (378) T ss_pred HHHHHHHHHHHHHHHHHHHHhhcCChhHhhhhhhcccccceeeccchhhhcCHHHHHHHHHHHHhCCCcCHHHHHHHhCC Confidence 999999999999999999999999875432 247899999999999999999999999999999999999999 Q ss_pred CCCCCccCceeeecccccccccccccCCCCCCCCCCCCcccCCCCCccCCccc Q lcl|Aclame:pro 383 PRSDDPKADELYANSALQPLGATPDGAVEGEEAPAPKRPASTPVASLDQSPPA 435 (518) Q Consensus 383 ~pi~~~~gD~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 435 (518) ||++ |||++++++|++|++...+.....+. .++. ++..++ T Consensus 339 ~p~~--ggD~~~~~~n~~~~~~~~~~~~~~~~--------~~~~---~e~~n~ 378 (378) T protein:vir:93 339 QPIE--GGDVYIANLNAVAVKNLSDLQGSRKD--------VTST---DETNNQ 378 (378) T ss_pred CCCC--CCCeeeeccccccccchhhhcCccCC--------CCCC---CCCCCC Confidence 9996 79999999999999876544221111 1111 111111 No 85 >protein:vir:1661 Length: 378 # NCBI annotation: unknown # Family: family:all:2379 # MgeID: mge:34 # MgeName: sk1 # Cross-refs: genbank:acc:NP_044950;genbank:gi:9629657;genbank:GeneID:1261302 Probab=100.00 E-value=1.3e-72 Score=414.72 Aligned_cols=359 Identities=14% Similarity=0.064 Sum_probs=268.7 Q ss_pred CCCCCCCCCccccccccchhhhhhhccCccCCcccCccchhhHHHHhhhHHHHHHHHHHHHhhccCceEEEEecCCce-- Q lcl|Aclame:pro 1 MLLANGQTLSAPAMAELSPQMQDSYYYAPAVGMQLERQFSLYGGIYKNQPWVRTVIAKRAQALARLPVKCMFTSGDTE-- 78 (518) Q Consensus 1 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~v~~ia~~ia~lp~~v~~~~~~~~-- 78 (518) =+|++..+-... ..+.... ..+. -.....+++.++|++||++||++||++||++++.+.++. T Consensus 2 g~f~~~~~~~~~----~~~~~~~---------~~~~---~~~~~~~~~~~~v~~~i~~Ia~~iA~l~~~~~~~~~~~~~~ 65 (378) T protein:vir:16 2 NLFGKVVSFSRG----KLNNDTQ---------RVTA---WQNEAVEYTSAFVTNIHNKIANEITKVEFNHVKYKKSDVGS 65 (378) T ss_pred ccchhhhhhhcc----cccCCcc---------eeee---cccchhhHHHHHHHHHHHHHHhhhhhCceeEEEEccccccc Confidence 233332211100 0000000 0000 011234568899999999999999999999988755432 Q ss_pred ----eeecchHHHHHhhccCccCCHHHHHHHHHHHHHHcCCeeEEeeeCCC-CceeeeeeeCCcceEEEeccCcceEEEE Q lcl|Aclame:pro 79 ----TEEHDTGYAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQKNKS-GTPEKLMPMHPSRVAIKRNSRTGRYEYY 153 (518) Q Consensus 79 ----~~~~~~~~~~l~~~PN~~~t~~~f~~~~~~~~ll~G~~~~~i~~~~~-G~~~~l~~l~p~~v~~~~~~~~~~~~~~ 153 (518) ....|+.+++|+.+||++||+++||+.++.+++++||+|++++++.. |+++.++|.. T Consensus 66 ~~~~~~~~~~l~~lL~~~PN~~~t~~~f~~~~~~~lll~Gna~i~~~~d~~~g~~~~l~~~~------------------ 127 (378) T protein:vir:16 66 DTLISMAGSDLDEVLNWSPKGERNSMDFWRKVIKKLLRAPYVDLYAVFDDNTGELLDLLFAD------------------ 127 (378) T ss_pred ccccccccchHHHHHhhcCCCCCCHHHHHHHHHHHHhhcCceEEEEEeecCCceEEEEEecC------------------ Confidence 12346667777779999999999999999999999999999888754 5555444421 Q ss_pred eeccCCCCceeEEEeeeeeEEeecCCCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHccCCcceeeeeCCcCCHHHHH Q lcl|Aclame:pro 154 FQAGAGVGTQLVSFADDEVVPIRFFNPDGLERGLSLMESLKSTIFSEDSSRNATAAMWKNAGRPNLVLRHEKRLSPEAQQ 233 (518) Q Consensus 154 ~~~~~~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~p~gil~~~~~~~~e~~~ 233 (518) ..+.|++++|||||++ .+...|.|++..+...+.. ++. ++.++|+|+.+..+++++.+ T Consensus 128 ---------~~~~~~~~diih~r~~--~~~~~~~s~l~~~~~~i~~----------~~~-~~~~~g~l~~~~~l~~~~~~ 185 (378) T protein:vir:16 128 ---------DKKEYKPEELVRLTSP--FYINEDTSILDNALASIQT----------KLE-QGKLRGLLKINAFLDIDNTQ 185 (378) T ss_pred ---------CeeEecccceEEecCc--cCccchhHHHHHHHHHHHH----------HHh-cCccceeeEeCCcCCHHHHH Confidence 1245788999999964 3345689999888766542 333 45789999999999988877 Q ss_pred HHHHHHHHHhc---CccccccceeccCCcccccccCChhhHHHHHHHHHHHHHHHHHhccchHhhccccccccccHHHHH Q lcl|Aclame:pro 234 RLREQFDRAHA---GSSNTGKTMVVEEGMEPIPLQLTAVEMQFIEARQLNREEVCGVYDIAPPIVHILDRATFSNISAQM 310 (518) Q Consensus 234 ~~~~~~~~~~~---g~~n~g~~~vl~~g~~~~~~~~~~~d~q~~e~~~~~~~~Ia~~fgVpp~~lg~~~~~~~s~~e~~~ 310 (518) +.++.|++.+. +..|+|+++++++|++|+++++++.++|+. .+++++++||++|||||.+|+ +++.+++. T Consensus 186 ~~~~~~~~~~~~~~~~~~~g~~~vl~~g~~~~~l~~~~~~~~~~-~~~~~~~~Ia~~fgVPp~~l~------g~~~e~~~ 258 (378) T protein:vir:16 186 EYREKALTTIKNMQEGSSYNGLTPVDNKTEIVELKKDYSVLNKD-EIDLIKSELLTGYFMNENILL------GTASQEQQ 258 (378) T ss_pred HHHHHHHHHHHHhhcccccccceEcCCCceEEEccCChhhhhHH-HHHHHHHHHHHHhCCCHHHhc------CCchHHHH Confidence 77777777653 446889999999999999999999999975 568999999999999999994 24558999 Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhcchhhcc--------ceeeechhhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHHhC Q lcl|Aclame:pro 311 RAFYRDTMAIPIARIQSAMDKYVGQYWVRK--------NRMKFDIDDVIQPDWEAKSESTQKMVNSGVATPNEGREIMGL 382 (518) Q Consensus 311 ~~~~~~~l~P~~~~ie~~ln~~l~~~~~~~--------~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~T~NE~R~~~g~ 382 (518) +.|+++||.||+++||++||++|++...+. ..++||++.+++.|.+++++.+.+++++|++|+||+|+++|+ T Consensus 259 ~~f~~~tl~P~~~~ie~~l~~kLl~~~e~~~~~~~~~~~~~~f~~~~l~~~d~~~~~~~~~~~~~~G~~T~NE~R~~~g~ 338 (378) T protein:vir:16 259 IYFYNSTIIPLLIQLEKELTYKLISTNRRRVVKGNLYYERIIVDNQLFKFATLKELIDLYHENINGPIFTQNQLLVKMGE 338 (378) T ss_pred HHHHHHHHHHHHHHHHHHHHhhcCChhhhhhhhhcccccceeeccchhhhcCHHHHHHHHHHHHhCCCcCHHHHHHHhCC Confidence 999999999999999999999999875432 237899999999999999999999999999999999999999 Q ss_pred CCCCCccCceeeecccccccccccccCCCCCCCCCCCCcccCCCCCccCCccc Q lcl|Aclame:pro 383 PRSDDPKADELYANSALQPLGATPDGAVEGEEAPAPKRPASTPVASLDQSPPA 435 (518) Q Consensus 383 ~pi~~~~gD~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 435 (518) ||++ |||++++|+|++|++...++....+. .++.. +..++ T Consensus 339 ~p~~--ggD~~~~~~n~~~~~~~~~~~~~~~~--------~~~~~---e~~ne 378 (378) T protein:vir:16 339 QPIE--GGDVYIANLNAVAVKNLSDLQGSRKD--------VTSTD---ETNNQ 378 (378) T ss_pred CCCC--CCCeEeeccccccccchhhhcCccCC--------CCCCC---CCCCC Confidence 9996 89999999999999876544221111 11011 11001 No 86 >protein:vir:99452 Length: 651 # NCBI annotation: hypothetical protein # Family: family:all:1379 # ACLAME annotation(s): phi:0000161 - phage head/capsid # MgeID: mge:1595 # MgeName: BJ1 # Cross-refs: genbank:acc:YP_919077;genbank:gi:119757035;genbank:GeneID:4606105 Probab=100.00 E-value=4.3e-72 Score=411.84 Aligned_cols=480 Identities=17% Similarity=0.165 Sum_probs=321.7 Q ss_pred CCCCCCCCCccccc-cccchhh--hhhhccCccCCcccCccchhhHHHHhhhHHHHHHHHHHHHhhccCceEEEEecC-- Q lcl|Aclame:pro 1 MLLANGQTLSAPAM-AELSPQM--QDSYYYAPAVGMQLERQFSLYGGIYKNQPWVRTVIAKRAQALARLPVKCMFTSG-- 75 (518) Q Consensus 1 ~~f~~~~~~~~~~~-~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~v~~ia~~ia~lp~~v~~~~~-- 75 (518) -++.......++.. ...+-.+ ...+... ...+...+.+....++..++++++||++++++||+++|.+....+ T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~p~~~~~~L~~~~e~~~~~~~~i~~~~~~iag~g~~~~~~~~~~ 89 (651) T protein:vir:99 12 KVHVEGLGGEADLAKSPNSTQIPDHRIQSHN--VGVNPPYNPDRLAAFLELNETLATGIRKKSRYEVGFGFDLVPAQGVD 89 (651) T ss_pred EEEeecccccccccccccccccchhhhcccC--CCCCCCCCHHHHHHHHhcChHHHHHHHHHhhhhhccCceeeecccCC Confidence 23333221111100 0011111 1122222 233334456667778888999999999999999999999876321 Q ss_pred -Cceee-----------ecchHHHHHhhccCccCCHHHHHHHHHHHHHHcCCeeEEeeeCCCCceeeeeeeCCcceEEEe Q lcl|Aclame:pro 76 -DTETE-----------EHDTGYAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQKNKSGTPEKLMPMHPSRVAIKR 143 (518) Q Consensus 76 -~~~~~-----------~~~~~~~~l~~~PN~~~t~~~f~~~~~~~~ll~G~~~~~i~~~~~G~~~~l~~l~p~~v~~~~ 143 (518) +.... ..++.+..+...+|+.+|+.+|++.++.|++.+||+|++++++..|.++.|+++++..+++.. T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~n~~~t~~~i~~~~~~Dle~tGna~ieiIrn~~g~pv~L~~lp~~~~Rv~~ 169 (651) T protein:vir:99 90 GDDASDAQREVARNFWRGRSSRWQTGPNQAKTPATPERVKELARQDYHGVGWLALEMLTDIEGRPVGLAYVPARTVRVRR 169 (651) T ss_pred CCccchHHHHHHHHHhhccchhhcccccccCCCCCHHHHHHHHHHHHHHHhhHhhhhhhcCccchhhhhhcChhheeeec Confidence 11110 112233444556789999999999999999999999999999999999999999988776543 Q ss_pred ccCcc--------------------------------eEEE--------------------------------------- Q lcl|Aclame:pro 144 NSRTG--------------------------------RYEY--------------------------------------- 152 (518) Q Consensus 144 ~~~~~--------------------------------~~~~--------------------------------------- 152 (518) +.... ..++ T Consensus 170 ~~~~~~~~~~~ll~~~pn~~~~~~~~~~~~q~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~d~~~~~~~~~~~~ 249 (651) T protein:vir:99 170 PQNRFDQPRHPEEGRYVDGDVADIASRGYVQIRNGNRRYFGEAGDRYRGQEVVIDESGDEPTIRYREDEESEREPIFVDR 249 (651) T ss_pred ccccccchhhhhhhcccccccchhHHHHHHHHHhcCcceEEEeeccccceeeeeccCCcceeEEeccCcceeeeeecccc Confidence 21100 0000 Q ss_pred ---EeeccCCCCceeEEEeeeeeEEeecCCCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHccCCcceeeeeCC-cCC Q lcl|Aclame:pro 153 ---YFQAGAGVGTQLVSFADDEVVPIRFFNPDGLERGLSLMESLKSTIFSEDSSRNATAAMWKNAGRPNLVLRHEK-RLS 228 (518) Q Consensus 153 ---~~~~~~~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~p~gil~~~~-~~~ 228 (518) .|.. ...+....+++++|||||++++.+.+||+||+..+..+|..+.++++++.++|+||++|+|||++++ .++ T Consensus 250 ~~g~~~~--~~~~~~~~~~~~eViHir~~~~~~g~~G~spl~~a~~~i~~a~~a~~~~~~~f~NG~~p~gil~~~~~~ls 327 (651) T protein:vir:99 250 ETGDVTT--GDANGLENRPANELIFIPNPSILEDDYGVPDWVSAIRTISADEAAKDYNRDFFDNDTIPRMVIKVTGGELS 327 (651) T ss_pred eeeeEEE--cCCCceeEecccceEEecCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEecCCCCC Confidence 0000 1112345678999999999988777899999999999999999999999999999999999999975 589 Q ss_pred HHHHHHHHHHHHHHhcCccccccceeccC-----------CcccccccCCh-hhHHHHHHHHHHHHHHHHHhccchHhhc Q lcl|Aclame:pro 229 PEAQQRLREQFDRAHAGSSNTGKTMVVEE-----------GMEPIPLQLTA-VEMQFIEARQLNREEVCGVYDIAPPIVH 296 (518) Q Consensus 229 ~e~~~~~~~~~~~~~~g~~n~g~~~vl~~-----------g~~~~~~~~~~-~d~q~~e~~~~~~~~Ia~~fgVpp~~lg 296 (518) +++++++++.|++.+. |+|+++||+. |++|+++++++ +|+||+|++++++.+||++|||||.++| T Consensus 328 ~e~~~~lr~~~~~~~~---nagk~~vL~~~~~~~~~~~~~g~~~~pls~~~~~D~qfle~r~~~~~eIa~afgVPp~~lG 404 (651) T protein:vir:99 328 EESKRDLRQMLNGLRE---ESHRAVVLEVEKFQSQLDEDVEIELEPMGQGISEEMDFRQFREKNEHEIAKVLEVPPVKIG 404 (651) T ss_pred HHHHHHHHHHHHHHhc---cCCceEEeecccccccccccCCceEEEcCcCchhhHHHHHHHHHHHHHHHHHhCCCHHHhc Confidence 9999999999998663 6789999875 89999999876 5999999999999999999999999999 Q ss_pred cccccccccHHHHHHHHHHHHHHHHHHHHHHHHHhhhcchhhc----cceeeechhhhhccCHHHHHHHHHHHHhCCCcC Q lcl|Aclame:pro 297 ILDRATFSNISAQMRAFYRDTMAIPIARIQSAMDKYVGQYWVR----KNRMKFDIDDVIQPDWEAKSESTQKMVNSGVAT 372 (518) Q Consensus 297 ~~~~~~~s~~e~~~~~~~~~~l~P~~~~ie~~ln~~l~~~~~~----~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~T 372 (518) +.++++++|+|++.+.|+++||+|++.+||++||++|++...+ .++++|+...+++.|.+++++.+..++++|+|| T Consensus 405 ~~~~~~~sn~E~~~~~f~~~tL~P~~~~ie~eln~kLl~~~e~~~~~~i~~ef~~~~llr~D~~~~~e~~~~~i~~G~~T 484 (651) T protein:vir:99 405 VTDSANRSNSDQQDKDFALEVIQPEQHTFAEWLYQIIHQQALGVTDWTIEYELRGADQPKQEAQLAEQRVRAMRLAGVGL 484 (651) T ss_pred cCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCccccccCceEEEEeccchhhhccHHHHHHHHHHHHhCCCcC Confidence 9999999999999999999999999999999999999986543 246788889999999999999999999999999 Q ss_pred HHHHHHHHhCCCCCCccCceeeecccccccccccccCCCCCCCCCCCCcccCCCCCccCCccccccccChhhhcchhHHH Q lcl|Aclame:pro 373 PNEGREIMGLPRSDDPKADELYANSALQPLGATPDGAVEGEEAPAPKRPASTPVASLDQSPPASVPGLSPTNSDRSTDSG 452 (518) Q Consensus 373 ~NE~R~~~g~~pi~~~~gD~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 452 (518) +||+|+++||||+++++||..+.+.++...+....+.. .+...++ ++ ..+....+.+++... T Consensus 485 ~NE~R~~lglppi~~~~gd~~l~~~~~~~~g~~~~gge----~~~~~~~------------~~-~~~~~~~e~~~~~~~- 546 (651) T protein:vir:99 485 VDEAREELGLDPLGEPYGEMTLSEFEAEVAGDVAGGGE----TEAVHEP------------PE-ENKIGEREWDTVKSE- 546 (651) T ss_pred HHHHHHHhCCCCCCCccccccccccccccccccccCCC----CcccccC------------cc-ccccccchhhhhhhh- Confidence 99999999999999989999887766554443221111 0000000 00 000000000000000 Q ss_pred HHHHHHHhhccCcchhHHHHHHHHHHHh-hhhhhhccccc--------chhhhh-hhHH-HHHHHHHHHHhhhcccC Q lcl|Aclame:pro 453 KTEPRRLMQKPPPKESSPKHLRAVKGAM-GRGKDIKGFAL--------QLAEKY-PDDL-EDILLAVQLALAERKDN 518 (518) Q Consensus 453 ~~~~~~~~~k~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~--------~~~~~~-~~~~-~~~~~~~~~~~~~~~~~ 518 (518) +.+ +|.-..+ ...++.+ +.+.+-...-+ .+|-.| =.++ +.+=.++..| +-+-. T Consensus 547 -------~~~---~e~~~~~-~v~ss~~~~~gyd~~~~~l~~~f~~~~~~~~~y~y~~v~~~~~~~~~~a--~s~g~ 610 (651) T protein:vir:99 547 -------LTT---KDPIEQM-QFSSSNLDEGLYDFGENELYLSFLRDEGQSSLYAYVDVPASEWSALANA--GSHGG 610 (651) T ss_pred -------hcc---cchhhhh-hHHHHHHHhhcCCCccceEEEEEeecCCCCceeeeeCCCHHHHHHHhcC--cccce Confidence 000 1100000 1111111 11111000000 011111 1112 2222221111 00111 No 87 >protein:vir:858 Length: 378 # NCBI annotation: putative portal protein # Family: family:all:2379 # MgeID: mge:18 # MgeName: bIL170 # Cross-refs: genbank:acc:NP_047117;genbank:gi:9630570;genbank:GeneID:1261758 Probab=100.00 E-value=4.6e-71 Score=406.21 Aligned_cols=359 Identities=14% Similarity=0.065 Sum_probs=261.5 Q ss_pred CCCCCCCCCccccccccchhhhhhhccCccCCcccCccchhhHHHHhhhHHHHHHHHHHHHhhccCceEEEEecCCce-- Q lcl|Aclame:pro 1 MLLANGQTLSAPAMAELSPQMQDSYYYAPAVGMQLERQFSLYGGIYKNQPWVRTVIAKRAQALARLPVKCMFTSGDTE-- 78 (518) Q Consensus 1 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~v~~ia~~ia~lp~~v~~~~~~~~-- 78 (518) =+|++-.+-..-.+... ............++++++|++||++||++||+||+++++++.++. T Consensus 2 ~~f~k~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~v~~~v~~ia~~iA~lp~~~~~~~~~~~~~ 65 (378) T protein:vir:85 2 NLFGKVVSFSRGKLNND----------------TQRVTAWQNEAVEYTSAFVTNIHNKIANEITKVEFNHVKYKKSDVGS 65 (378) T ss_pred chhhhhhhhhhcccccC----------------CcceeeeeccchhhhhHHHHHHHHHHHHhHhhCceeEEEEecccccc Confidence 23332111000000000 000001112345678899999999999999999999998765432 Q ss_pred ----eeecchHHHHHhhccCccCCHHHHHHHHHHHHHHcCCeeEEeee-CCCCceeeeeeeCCcceEEEeccCcceEEEE Q lcl|Aclame:pro 79 ----TEEHDTGYAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQK-NKSGTPEKLMPMHPSRVAIKRNSRTGRYEYY 153 (518) Q Consensus 79 ----~~~~~~~~~~l~~~PN~~~t~~~f~~~~~~~~ll~G~~~~~i~~-~~~G~~~~l~~l~p~~v~~~~~~~~~~~~~~ 153 (518) ...+|+++++|+.+||++||+++||+.++.+++++||+|++++. +..|.+.. . T Consensus 66 ~~~~~~~~~~l~~lL~~~PN~~~t~~~f~~~~~~~lll~Gnayi~~i~~~~~g~~~~----------------------~ 123 (378) T protein:vir:85 66 DTLISMAGSDLDEVLNWSYKGEHNSMEFWQKVIKKLLCTRYVDLYPIFDSETGELLD----------------------L 123 (378) T ss_pred ccccccccchHHHHHhccCCCCCCHHHHHHHHHHHHhhcCCeEEEEeecCCCceEEE----------------------E Confidence 23456677778889999999999999999999999999998643 33343332 2 Q ss_pred eeccCCCCceeEEEeeeeeEEeecCCCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHccCCcceeeeeCCcCCHHHHH Q lcl|Aclame:pro 154 FQAGAGVGTQLVSFADDEVVPIRFFNPDGLERGLSLMESLKSTIFSEDSSRNATAAMWKNAGRPNLVLRHEKRLSPEAQQ 233 (518) Q Consensus 154 ~~~~~~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~p~gil~~~~~~~~e~~~ 233 (518) ++..+ .+.+.+++|||++.+... ..+.+.+..+...+ ..+++ ++.|+|+|+.+..+++++.+ T Consensus 124 ~~~~~-----~~~~~~~dvih~~~~~~~--~~~~~~~~~a~~~~----------~~~~~-~~~~~g~l~~~~~l~~~~~~ 185 (378) T protein:vir:85 124 LFAND-----KKEYKPEELVRLVSPFYI--NEDTSILDNALASI----------QTKLE-QGKLRGLLKINAFLDIDNTQ 185 (378) T ss_pred EecCC-----CEEEcccceEEEecCcCc--cchhhHHHHHHHHH----------HHHHh-cCCcceEEEeCCcCCHHHHH Confidence 22211 245778899999864322 22345544444332 23344 45789999999999998888 Q ss_pred HHHHHHHHHh---cCccccccceeccCCcccccccCChhhHHHHHHHHHHHHHHHHHhccchHhhccccccccccHHHHH Q lcl|Aclame:pro 234 RLREQFDRAH---AGSSNTGKTMVVEEGMEPIPLQLTAVEMQFIEARQLNREEVCGVYDIAPPIVHILDRATFSNISAQM 310 (518) Q Consensus 234 ~~~~~~~~~~---~g~~n~g~~~vl~~g~~~~~~~~~~~d~q~~e~~~~~~~~Ia~~fgVpp~~lg~~~~~~~s~~e~~~ 310 (518) ++++.|++.+ .+..|+|+++++++|++|+++++++.++++ +.+++..++||++|||||++|+ .++.+++. T Consensus 186 ~~~~~~~~~~~~~~~~~~~g~~~vl~~g~~~~~l~~~~~~~~~-~~~~~~~~~Ia~~fgVPp~~l~------~s~~e~~~ 258 (378) T protein:vir:85 186 EYREKALATIKNMQEGSSYNGLTPVDNKTEIVELKKDYSVLNK-DEIELIKSELLTGYFMNENILL------GTATQEQQ 258 (378) T ss_pred HHHHHHHHHHHHhhcccccccceecCCCceEEeccCChhhhhH-HHHHHHHHHHHHHhCCCHHHhc------CCchHHHH Confidence 8887776654 355688999999999999999999999996 6689999999999999999994 34568999 Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhcchhhcc--------ceeeechhhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHHhC Q lcl|Aclame:pro 311 RAFYRDTMAIPIARIQSAMDKYVGQYWVRK--------NRMKFDIDDVIQPDWEAKSESTQKMVNSGVATPNEGREIMGL 382 (518) Q Consensus 311 ~~~~~~~l~P~~~~ie~~ln~~l~~~~~~~--------~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~T~NE~R~~~g~ 382 (518) .+|+++||.||+.+||++||++|++..++. ..++||.+.++++|.+++++.+.+++++|++|+||+|+++|+ T Consensus 259 ~~f~~~tL~P~~~~ie~~l~~kLl~~~er~~~~~~~~~~~~~f~~~~l~~~d~~~~~~~~~~~~~~G~~T~NE~R~~lgl 338 (378) T protein:vir:85 259 IYFYNSTIIPLLIQLEKELTYKLISTNRRRVVKGNLYYERIIVDNQLFKFATLKELIDLYHENINGPIFTQNQLLVKMGE 338 (378) T ss_pred HHHHHHHHHHHHHHHHHHHHhhcCChhhhhhhhhccccceeeecchhhhhcCHHHHHHHHHHHHhCCCcCHHHHHHHhCC Confidence 999999999999999999999999865432 236799999999999999999999999999999999999999 Q ss_pred CCCCCccCceeeecccccccccccccCCCCCCCCCCCCcccCCCCCccCCccc Q lcl|Aclame:pro 383 PRSDDPKADELYANSALQPLGATPDGAVEGEEAPAPKRPASTPVASLDQSPPA 435 (518) Q Consensus 383 ~pi~~~~gD~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 435 (518) ||++ |||++++|+|++|++.........+.. + ..++..++ T Consensus 339 ~p~~--gGD~~~~~~N~~~~~~~~~~~~~~~~~--------~---~~~e~~n~ 378 (378) T protein:vir:85 339 QPIE--GGDIYIANLNAVAVKNLSDLQGSRKDV--------A---STDETNNQ 378 (378) T ss_pred CCCC--CCCeEeecccccccccchhhcCccCCC--------C---CCCCCCCC Confidence 9996 899999999999998765443221111 0 01111111 No 88 >protein:vir:94869 Length: 378 # NCBI annotation: putative portal protein # Family: family:all:2379 # MgeID: mge:1532 # MgeName: P008 # Cross-refs: genbank:acc:YP_762515;genbank:gi:115304214;genbank:GeneID:5141182 Probab=100.00 E-value=2.5e-70 Score=402.15 Aligned_cols=359 Identities=13% Similarity=0.062 Sum_probs=262.7 Q ss_pred CCCCCCCCCccccccccchhhhhhhccCccCCcccCccchhhHHHHhhhHHHHHHHHHHHHhhccCceEEEEecCCce-- Q lcl|Aclame:pro 1 MLLANGQTLSAPAMAELSPQMQDSYYYAPAVGMQLERQFSLYGGIYKNQPWVRTVIAKRAQALARLPVKCMFTSGDTE-- 78 (518) Q Consensus 1 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~v~~ia~~ia~lp~~v~~~~~~~~-- 78 (518) =||++-.+... .....+. ......+....++++++|++||++||++||++|+++++++..+. T Consensus 2 ~if~~~~~~~~---------------~~~~~~~-~~~~~~~~~~~~~~~~~v~~~v~~Ia~~iA~lp~~~~~~~~~~~~~ 65 (378) T protein:vir:94 2 NLFGKVVSFSR---------------GKLNNDT-QRVTAWQNEAVEYTSAFVTNIHNKIANEITKVEFNHVKYKKSDVGS 65 (378) T ss_pred chhHHhHhhhh---------------cccccCc-ceeeeeecchhhhhhHHHHHHHHHHHHhHhhCceeeeeeccccccc Confidence 34554332110 0000000 00001122345678889999999999999999999988754321 Q ss_pred ----eeecchHHHHHhhccCccCCHHHHHHHHHHHHHHcCCeeEEeee-CCCCceeeeeeeCCcceEEEeccCcceEEEE Q lcl|Aclame:pro 79 ----TEEHDTGYAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQK-NKSGTPEKLMPMHPSRVAIKRNSRTGRYEYY 153 (518) Q Consensus 79 ----~~~~~~~~~~l~~~PN~~~t~~~f~~~~~~~~ll~G~~~~~i~~-~~~G~~~~l~~l~p~~v~~~~~~~~~~~~~~ 153 (518) ....|+++++|+.+||++||+++||+.++.+++++||+|+++++ +..|.+..+++. T Consensus 66 ~~~~~~~~~~l~~lLn~~PN~~~t~~~f~~~~~~~lll~Gnayi~~i~~~~~g~~~~~~~~------------------- 126 (378) T protein:vir:94 66 DTLISMAGSDLDEVLNWSSKGERNSMEFWQKVIKKLLTTRYIDLYPIFDSETGELLDLLFA------------------- 126 (378) T ss_pred ccccccccchHHHHHhhcCCCCCCHHHHHHHHHHHHhhcCCeEEEEEeeCCCCcEEEEEEe------------------- Confidence 23457777888889999999999999999999999999998554 334554433321 Q ss_pred eeccCCCCceeEEEeeeeeEEeecCCCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHccCCcceeeeeCCcCCHHHHH Q lcl|Aclame:pro 154 FQAGAGVGTQLVSFADDEVVPIRFFNPDGLERGLSLMESLKSTIFSEDSSRNATAAMWKNAGRPNLVLRHEKRLSPEAQQ 233 (518) Q Consensus 154 ~~~~~~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~p~gil~~~~~~~~e~~~ 233 (518) .+ ..+|++++|||++.+...+ .+.+++..+...+. ..++ ++.++|+|+.+..+++++.+ T Consensus 127 ---~~-----~~~~~~~dvih~~~~~~~~--~~~~~~~~~~~~~~----------~~~~-~~~~~g~l~~~~~l~~~~~~ 185 (378) T protein:vir:94 127 ---ND-----KKEYKPEELVRLTSPFYIN--EDTSILDNALASIQ----------TKLE-QGKLRGLLKINAFLDIDNTQ 185 (378) T ss_pred ---cC-----cEEechhceeeecCcCCcc--cchhHHHHHHHHHH----------HHHh-hCCcccceeeCCcCCHHHHH Confidence 11 1457899999999665433 25666666655443 2233 35788999999999987766 Q ss_pred HHHHHHHHHh---cCccccccceeccCCcccccccCChhhHHHHHHHHHHHHHHHHHhccchHhhccccccccccHHHHH Q lcl|Aclame:pro 234 RLREQFDRAH---AGSSNTGKTMVVEEGMEPIPLQLTAVEMQFIEARQLNREEVCGVYDIAPPIVHILDRATFSNISAQM 310 (518) Q Consensus 234 ~~~~~~~~~~---~g~~n~g~~~vl~~g~~~~~~~~~~~d~q~~e~~~~~~~~Ia~~fgVpp~~lg~~~~~~~s~~e~~~ 310 (518) +.++.|++.+ .+..|+|+++++++|++|+++++++.++|+ +.++++.++||++|||||++++. ++.+++. T Consensus 186 ~~~e~~~~~~~~~~~~~n~~~~~vl~~g~~~~~l~~~~~~~~~-~~~~~~~~~Ia~~fgvPp~~l~g------~~~e~~~ 258 (378) T protein:vir:94 186 EYREKALATIKNMQEGSSYNGLTPVDNKTEIVELKKDYSVLNK-DEIDLIKSELLTGYFMNENILLG------TATQEQQ 258 (378) T ss_pred HHHHHHHHHHHHhhcccccccceeccCCceEEEccCChHHhhH-HHHHHHHHHHHHHhCCCHHHhcC------CchHHHH Confidence 6666555543 234678899999999999999999999996 66789999999999999999952 2347889 Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhcchhhcc--------ceeeechhhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHHhC Q lcl|Aclame:pro 311 RAFYRDTMAIPIARIQSAMDKYVGQYWVRK--------NRMKFDIDDVIQPDWEAKSESTQKMVNSGVATPNEGREIMGL 382 (518) Q Consensus 311 ~~~~~~~l~P~~~~ie~~ln~~l~~~~~~~--------~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~T~NE~R~~~g~ 382 (518) ++|+++||.||+.+||++||++|++...+. ..++|+++.++++|.+++++.+.+++++|++|+||+|+++|+ T Consensus 259 ~~f~~~tl~P~~~~ie~~l~~~Ll~~~e~~~g~~~~~~~~~~f~~~~l~~~d~~~~~e~~~~~~~~G~~t~NE~R~~~g~ 338 (378) T protein:vir:94 259 IYFYNSTIIPLLIQLEKELTYKLISTNRRRVVKGNLYYERIIVDNQLFKFATLKELIDLYHENINGPIFTQNQLLVKMGE 338 (378) T ss_pred HHHHHHHHHHHHHHHHHHHHhhcCChhHhhhhhhhcccceeEeecchhhhcCHHHHHHHHHHHHhCCCcCHHHHHHHhCC Confidence 999999999999999999999999764432 247799999999999999999999999999999999999999 Q ss_pred CCCCCccCceeeecccccccccccccCCCCCCCCCCCCcccCCCCCccCCccc Q lcl|Aclame:pro 383 PRSDDPKADELYANSALQPLGATPDGAVEGEEAPAPKRPASTPVASLDQSPPA 435 (518) Q Consensus 383 ~pi~~~~gD~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 435 (518) ||++ |||++++|+|++|++.........+..... ++..++ T Consensus 339 ~p~~--ggd~~~~~~n~~~~~~~~~~~~~~~~~~~~-----------~e~~n~ 378 (378) T protein:vir:94 339 QPIE--GGDVYIANLNAVAVKNLSDLQGNRKDVTST-----------DETNNQ 378 (378) T ss_pred CCCC--CCCeeeecccccchhcchhcccccCCCCCC-----------CCCCCC Confidence 9996 899999999999998766543321111100 011001 No 89 >protein:vir:78641 Length: 278 # NCBI annotation: portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:1855 # MgeName: tp310-2 # Cross-refs: genbank:acc:YP_001429941;genbank:gi:156603995;genbank:GeneID:5525387 Probab=100.00 E-value=1.5e-63 Score=365.04 Aligned_cols=276 Identities=16% Similarity=0.272 Sum_probs=253.3 Q ss_pred hccCceEEEEecCCceeeecchHHHHHhhccCccCCHHHHHHHHHHHHHHcCCeeEEeeeCCCCceeeeeeeCCcceEEE Q lcl|Aclame:pro 63 LARLPVKCMFTSGDTETEEHDTGYAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQKNKSGTPEKLMPMHPSRVAIK 142 (518) Q Consensus 63 ia~lp~~v~~~~~~~~~~~~~~~~~~l~~~PN~~~t~~~f~~~~~~~~ll~G~~~~~i~~~~~G~~~~l~~l~p~~v~~~ 142 (518) ||++|+++++++. ..+++.+++|+.+||++||+.+||+.++.+++++||+|++++++.+|++++|+|++|++|++. T Consensus 1 ia~l~~~~~~~~~----~~~~~l~~lL~~~PN~~~t~~~f~~~~~~~ll~~Gna~~~i~r~~~G~~~~l~~l~~~~v~v~ 76 (278) T protein:vir:78 1 MASLPLKMYEDYK----VVNTEVSDLLTVSPNNSLSSFDFINQIETIRNEKGNAYVLIERDIYHQPSKLFLLNPDVVEML 76 (278) T ss_pred CccceeEEEecCc----ccccHHHHHHHhcCCCCCCHHHHHHHHHHHHhhcCCEEEEEEECCCCcEEEEEEECCceeEEE Confidence 9999999998653 345777888889999999999999999999999999999999999999999999999999999 Q ss_pred eccCcceEEEEeeccCCCCceeEEEeeeeeEEeecCCCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHccCCcceeee Q lcl|Aclame:pro 143 RNSRTGRYEYYFQAGAGVGTQLVSFADDEVVPIRFFNPDGLERGLSLMESLKSTIFSEDSSRNATAAMWKNAGRPNLVLR 222 (518) Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~p~gil~ 222 (518) .+.+++..+|.+... ++..+.|++++|||++++++.+.++|+||+..+..++....++++++...+.+ .|+++++ T Consensus 77 ~~~~~~~~~y~~~~~---~g~~~~~~~~evih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~~--~~~~i~~ 151 (278) T protein:vir:78 77 IENQSRELYYSIHAA---TGNKLIVHNMDMLHFKHIVASNMVQGISPIDVLKNTTDFDNAVRTFNLTEMQK--PDSFMLK 151 (278) T ss_pred EcCCCceEEEEEEcC---CceEEEEccccEEEECCCCCCCCeeeccHHHHHHHHHHHHHHHHHHHHHHhcC--CCcEEEE Confidence 998888888877543 45678899999999999988888899999999999999999999987655555 5789999 Q ss_pred eCCcCCHHHHHHHHHHHHHHhcCccccccceeccCCcccccccCChhhHHHHHHHHHHHHHHHHHhccchHhhccccccc Q lcl|Aclame:pro 223 HEKRLSPEAQQRLREQFDRAHAGSSNTGKTMVVEEGMEPIPLQLTAVEMQFIEARQLNREEVCGVYDIAPPIVHILDRAT 302 (518) Q Consensus 223 ~~~~~~~e~~~~~~~~~~~~~~g~~n~g~~~vl~~g~~~~~~~~~~~d~q~~e~~~~~~~~Ia~~fgVpp~~lg~~~~~~ 302 (518) .+..+++++.+++++.|++.+. ++|+++++++|++|+++++++.|++|+|.++++.++||++|||||.++|..++++ T Consensus 152 ~~~~l~~e~~~~~~~~~~~~~~---~~g~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgVpp~~lg~~~~~~ 228 (278) T protein:vir:78 152 YGSNVGKEKRQQVLEDFKQYYE---ENGGILFQEPGVEIEPLPKKYVSEDIVASENLTRERVANVFQLPSVFLNARSNTN 228 (278) T ss_pred eCCCCCHHHHHHHHHHHHHHhc---cCCCceecCCCceEEEccCChhHHHHHHHHHHHHHHHHHHhCCCHHHhCCCCCCC Confidence 9999999999999999998764 5789999999999999999999999999999999999999999999999999999 Q ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHhhhcchhh--ccceeeechhhh Q lcl|Aclame:pro 303 FSNISAQMRAFYRDTMAIPIARIQSAMDKYVGQYWV--RKNRMKFDIDDV 350 (518) Q Consensus 303 ~s~~e~~~~~~~~~~l~P~~~~ie~~ln~~l~~~~~--~~~~~~fd~~~l 350 (518) ++|.+++.+.|+++||+|+++.|+++||++|+++.+ .+++++||++.| T Consensus 229 ~sn~~~~~~~~~~~~l~P~~~~i~~~ln~~L~~~~e~~~g~~~~f~~~~l 278 (278) T protein:vir:78 229 FAKNEELNRFYLQHTLLPIVKQYEEEFNRKLLTKTDREKIGILNLTLNLI 278 (278) T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHhhcCChhHhcCCceEEEecccC Confidence 999999999999999999999999999999998754 468999999998 No 90 >protein:vir:103971 Length: 376 # NCBI annotation: pbsx family phage portal protein # Family: family:all:196 # MgeID: mge:1665 # MgeName: phi52237 # Cross-refs: genbank:acc:YP_293752;genbank:gi:72537722;genbank:GeneID:3608098 Probab=100.00 E-value=1e-58 Score=338.49 Aligned_cols=313 Identities=17% Similarity=0.249 Sum_probs=246.9 Q ss_pred CCCCCCCCCccccccccchhhhhhhccCccCCcccCc--cchhhHHHHhhhHHHHHHHHHHHHhhccCceEEEEecCCce Q lcl|Aclame:pro 1 MLLANGQTLSAPAMAELSPQMQDSYYYAPAVGMQLER--QFSLYGGIYKNQPWVRTVIAKRAQALARLPVKCMFTSGDTE 78 (518) Q Consensus 1 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~v~~~v~~ia~~ia~lp~~v~~~~~~~~ 78 (518) -+|+-+...+.-..+.....+ +.+..|....+ .......++..++.+.+||.+.++.+++ T Consensus 54 ~~f~fg~p~~v~~~~~~~~~~-----~~~~~~~~~~pp~~~~~La~~~~~~~~h~s~l~~k~n~l~~------------- 115 (376) T protein:vir:10 54 EVFTFDDPTPVMNRAEILDYV-----ECWSNGEWFEPPVSFAGLAKSFRASTHHSSALFFKANVLAS------------- 115 (376) T ss_pred EEEEcCCceeccCcchhhhhh-----hhhhcCceecCCCCHHHHHHHHhhhHHhhhhHHHHhHHHHh------------- Confidence 111111111110000111111 11111111111 1222345666777777787776655543 Q ss_pred eeecchHHHHHhhccCccCCHHHHHHHHHHHHHHcCCeeEEeeeCCCCceeeeeeeCCcceEEEeccCcceEEEEeeccC Q lcl|Aclame:pro 79 TEEHDTGYAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQKNKSGTPEKLMPMHPSRVAIKRNSRTGRYEYYFQAGA 158 (518) Q Consensus 79 ~~~~~~~~~~l~~~PN~~~t~~~f~~~~~~~~ll~G~~~~~i~~~~~G~~~~l~~l~p~~v~~~~~~~~~~~~~~~~~~~ 158 (518) .-+||+++|..+|++ ++.+++++||+|++++++..|++++|+|++|.+|++..+.++ .+| + . T Consensus 116 -----------~~~Pnp~lT~~~f~~-~v~d~ll~Gnay~~~~rn~~G~~~~L~pl~~~~vr~~~d~~~--~~~-~-~-- 177 (376) T protein:vir:10 116 -----------TFRPHRWLSRHAFER-WALDFLTFGNGYLERRRNMVGGTLRLEPALAKYVRRKADFNG--FVY-V-N-- 177 (376) T ss_pred -----------ccCCCCCCCHHHHHH-HHHHHHhcCCeEEEEEECCCCCEEEEEEeCCcceEEEeeCCe--EEE-E-E-- Confidence 237999999999986 567999999999999999999999999999999999886543 222 1 1 Q ss_pred CCCceeEEEeeeeeEEeecCCCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHccCCcceeeeeC-CcCCHHHHHHHHH Q lcl|Aclame:pro 159 GVGTQLVSFADDEVVPIRFFNPDGLERGLSLMESLKSTIFSEDSSRNATAAMWKNAGRPNLVLRHE-KRLSPEAQQRLRE 237 (518) Q Consensus 159 ~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~p~gil~~~-~~~~~e~~~~~~~ 237 (518) .++..+.|++++||||+.+++.+.+||+|++..+..++....+++.|+.++|+||++|++||.++ ..+++++.+++++ T Consensus 178 -~~~~~~~~~~~eViHir~~~~~~~~yGls~~~~a~~si~l~~aa~~f~~~~f~NGa~pggIl~~~d~~l~~e~~~~lr~ 256 (376) T protein:vir:10 178 -GWQERHEFEPDSVFQLVRPDINQEVYGLPEYLSSLHSAWLNESSTLFRRKYYENGSHAGFILYMTDAAQKQDDVDNMRD 256 (376) T ss_pred -cCCeEEEEccccEEEecCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEecCCCCCHHHHHHHHH Confidence 23566889999999999999888899999999999999999999999999999999999999886 4789999999999 Q ss_pred HHHHHhcCccccccceec-----cCCcccccccCChhhHHHHHHHHHHHHHHHHHhccchHhhccccc--cccccHHHHH Q lcl|Aclame:pro 238 QFDRAHAGSSNTGKTMVV-----EEGMEPIPLQLTAVEMQFIEARQLNREEVCGVYDIAPPIVHILDR--ATFSNISAQM 310 (518) Q Consensus 238 ~~~~~~~g~~n~g~~~vl-----~~g~~~~~~~~~~~d~q~~e~~~~~~~~Ia~~fgVpp~~lg~~~~--~~~s~~e~~~ 310 (518) +|++ +.|.+|+++++|+ ++|++|++++.+++|+||+|.+++++++||++|||||.++|+.++ ++++|+|++. T Consensus 257 ~~~~-~~G~~N~~~~~vl~~~g~~~Gi~~~pls~~~~d~qf~e~k~~~~~eIa~af~VPp~llGi~~~~t~~~sn~eq~~ 335 (376) T protein:vir:10 257 ALKN-AKGPGNFRNVFMYAPGGKKDGIQLIPVSEVAAKDEFFNIKNVTRDDLLAAHRVPPQLLGIVPSNSGGFGTPDTAA 335 (376) T ss_pred HHHH-hcCccccCceeEecCCCCccceEEEEccCCHHHHHHHHHHHHhHHHHHHHhCCCHHHhcccCCCCCCcccHHHHH Confidence 9987 6888999999998 578999999999999999999999999999999999999998654 5689999999 Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhcchhhccceeeechhhhhccCHHH Q lcl|Aclame:pro 311 RAFYRDTMAIPIARIQSAMDKYVGQYWVRKNRMKFDIDDVIQPDWEA 357 (518) Q Consensus 311 ~~~~~~~l~P~~~~ie~~ln~~l~~~~~~~~~~~fd~~~l~~~d~~~ 357 (518) +.|++++|.|+++.|+ ++|.+|... .++|+...|+++|.++ T Consensus 336 ~~f~~~~L~Pl~~~ie-eln~~L~~~-----~~~F~~~~Llr~d~ka 376 (376) T protein:vir:10 336 RVFGRNEIRPLQARFA-ELNDWLGEE-----VVRFDDYEIPPAPVAA 376 (376) T ss_pred HHHHHHHHHHHHHHHH-HHHhhcccc-----ccccChhHhhcccccC Confidence 9999999999999998 588877432 4889999999999987 No 91 >protein:vir:79150 Length: 368 # NCBI annotation: bacteriophage gpQ # Family: family:all:196 # MgeID: mge:1863 # MgeName: RSA1 # Cross-refs: genbank:acc:YP_001165254;genbank:gi:145708079;genbank:GeneID:5247161 Probab=100.00 E-value=2e-59 Score=342.45 Aligned_cols=337 Identities=17% Similarity=0.222 Sum_probs=252.9 Q ss_pred CCCCCCCccccc------c------------ccchhhhhhhccCccCCcccCccchhhHHH-----HhhhHHHHHHHHHH Q lcl|Aclame:pro 3 LANGQTLSAPAM------A------------ELSPQMQDSYYYAPAVGMQLERQFSLYGGI-----YKNQPWVRTVIAKR 59 (518) Q Consensus 3 f~~~~~~~~~~~------~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~v~~~v~~i 59 (518) |+|+......-. . ..++.....|+ .+. .+........+.+. |...|+-+.|+..+ T Consensus 1 m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fg-~p~-~~~~~~~~~~~~~~~~~~~~~~~pi~~~~la~~ 78 (368) T protein:vir:79 1 MSRNKTRRAARAASAHVRTANTDAPTEHHTDRAAQAEVFSFG-DPV-EVLDRRELLDYVECMRMGQWYEPPMPWDGLARS 78 (368) T ss_pred CCccccccchhccCcccccccccCcchhhccccCceEEEEcC-Cce-eecchhhHHHHHHHHhccchhccCcCHHHHHHH Confidence 555443221100 0 00111111122 111 11111111122222 33334444554443 Q ss_pred HHhhccCceEEEEecCCceeeecchHHHHHhhccCccCCHHHHHHHHHHHHHHcCCeeEEeeeCCCCceeeeeeeCCcce Q lcl|Aclame:pro 60 AQALARLPVKCMFTSGDTETEEHDTGYAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQKNKSGTPEKLMPMHPSRV 139 (518) Q Consensus 60 a~~ia~lp~~v~~~~~~~~~~~~~~~~~~l~~~PN~~~t~~~f~~~~~~~~ll~G~~~~~i~~~~~G~~~~l~~l~p~~v 139 (518) .+. .+.+ +......+.+..|+.+||+.||+++|++ ++.+++++||+|++++++..|++++|+|++|.+| T Consensus 79 ~~~---~~~h-------~~~~~~~~n~l~l~~~Pn~~~t~~~f~~-l~~d~ll~Gnay~~~~r~~~G~~~~L~~l~~~~v 147 (368) T protein:vir:79 79 FRA---AAHH-------SSAVYVKRNILVSTFIPHPLLSRATFER-LVLDWQVFGNAYLERRENVLGGTIRLDTPLAKYV 147 (368) T ss_pred Hhh---cccc-------chhhhhhcchhhhhcCCCcCCCHHHHHH-HHHHHhhcCCeEEEEEEcCCCCEEEEEEeCcccc Confidence 322 2211 1222233445678889999999999976 6789999999999999999999999999999999 Q ss_pred EEEeccCcceEEEEeeccCCCCceeEEEeeeeeEEeecCCCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHccCCcce Q lcl|Aclame:pro 140 AIKRNSRTGRYEYYFQAGAGVGTQLVSFADDEVVPIRFFNPDGLERGLSLMESLKSTIFSEDSSRNATAAMWKNAGRPNL 219 (518) Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~p~g 219 (518) ++..+.+ .. |.+. .+++.+.|++.+||||+.+++.+.+||+||+..+..++....+++.|..++|+||++|+| T Consensus 148 ~~~~~~~--~~-~~~~----~~~~~~~~~~~dIihir~~~~~~~~yGlsp~~~a~~si~l~~aa~~~~~~~~~NGa~~~g 220 (368) T protein:vir:79 148 RRGLDLN--TY-FFVQ----NWQQPYTFAAGSVFHLQEPDINQEVYGLPEYLSALNATWLNESATLFRRRYYKNGSHAGF 220 (368) T ss_pred eeeccCC--EE-EEEe----cCCeEEEEccccEEEecCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhccCCCce Confidence 9766532 22 2222 235678899999999999998888999999999999999999999999999999999999 Q ss_pred eeeeC-CcCCHHHHHHHHHHHHHHhcCccccccceec-----cCCcccccccCChhhHHHHHHHHHHHHHHHHHhccchH Q lcl|Aclame:pro 220 VLRHE-KRLSPEAQQRLREQFDRAHAGSSNTGKTMVV-----EEGMEPIPLQLTAVEMQFIEARQLNREEVCGVYDIAPP 293 (518) Q Consensus 220 il~~~-~~~~~e~~~~~~~~~~~~~~g~~n~g~~~vl-----~~g~~~~~~~~~~~d~q~~e~~~~~~~~Ia~~fgVpp~ 293 (518) ||.++ ..+++++.++++++|++ +.|.+|+|+++|+ ++|++|++++.++.|+||+|.+++++++||++|||||. T Consensus 221 il~~~~~~l~~e~~~~lk~~~~~-~~G~~N~g~~~vl~~~g~~~g~~~~pls~~~~d~qf~e~k~~~~~eIa~af~VPp~ 299 (368) T protein:vir:79 221 ILYMTDAAQKQEDVDTLREAMKS-AKGPGNFRNLFMYAPNGKKDGIQLLPVSEVAAKDEFWNIKNVTRDDQLAAHRVPPQ 299 (368) T ss_pred EEEeCCCCCCHHHHHHHHHHHHH-hcCCcccCceeEecCCCCccceeEEEcCCCHHHHHHHHHHHHhHHHHHHHhCCCHH Confidence 99887 46899999999999987 6788999999998 67899999999999999999999999999999999999 Q ss_pred hhccccc--cccccHHHHHHHHHHHHHHHHHHHHHHHHHhhhcchhhccceeeechhhhhccCHHHHHHHHHHHHhCC Q lcl|Aclame:pro 294 IVHILDR--ATFSNISAQMRAFYRDTMAIPIARIQSAMDKYVGQYWVRKNRMKFDIDDVIQPDWEAKSESTQKMVNSG 369 (518) Q Consensus 294 ~lg~~~~--~~~s~~e~~~~~~~~~~l~P~~~~ie~~ln~~l~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g 369 (518) ++|+.++ ++++|++++.+.|++++|.|++..|+ ++|.+|.. ..++|+...+++.|.+.++..... +. T Consensus 300 llGi~~~~t~~~sn~e~~~~~f~~~~l~Pl~~~ie-~ln~~l~~-----e~~rF~~~~l~~~D~~a~a~~~~r---sa 368 (368) T protein:vir:79 300 LMGIIPNNTGGFGDVEKAAMVFARNEVKPLQDRLL-AINDWIGD-----EVVRFAPYALGGHDQPAAAPGGQR---SA 368 (368) T ss_pred HccccCCCCCccccHHHHHHHHHHHHHHHHHHHHH-HHHhccCc-----ceeeechhHhhcccccccCCcccc---cC Confidence 9998664 45899999999999999999999998 68887754 357899999999998887762221 11 No 92 >protein:vir:79207 Length: 351 # NCBI annotation: gp5, phage portal protein, pbsx family # Family: family:all:196 # MgeID: mge:1866 # MgeName: phiE202 # Cross-refs: genbank:acc:YP_001111036;genbank:gi:134288763;genbank:GeneID:4960726 Probab=100.00 E-value=9.9e-58 Score=333.11 Aligned_cols=316 Identities=17% Similarity=0.260 Sum_probs=244.8 Q ss_pred CCCCCCCccccccc--------cchhhhhhhc-----------------cCccCCcccCc--cchhhHHHHhhhHHHHHH Q lcl|Aclame:pro 3 LANGQTLSAPAMAE--------LSPQMQDSYY-----------------YAPAVGMQLER--QFSLYGGIYKNQPWVRTV 55 (518) Q Consensus 3 f~~~~~~~~~~~~~--------~~~~~~~~~~-----------------~~~~~~~~~~~--~~~~~~~~~~~~~~v~~~ 55 (518) |.+++......... ..+.-...|. +.+..|..+.+ .......++..++.+.+| T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~~pp~~~~~la~~~~~~~~h~~~ 80 (351) T protein:vir:79 1 MSKRRSRAPRTFAAAPNPSAGSAAPARAEVFTFDDPTPVMNRAEILDYVECWSNGEWFEPPVSFAGLAKSFRASTHHSSA 80 (351) T ss_pred CCCCCCCCCCCCCCCCchhhhhcccceeEEEEcCCceeecCcchhhhhhhhhhcCceecCCCCHHHHHHHHhhhHhhhhh Confidence 44333221111000 0000001111 11111111111 112223445556666666 Q ss_pred HHHHHHhhccCceEEEEecCCceeeecchHHHHHhhccCccCCHHHHHHHHHHHHHHcCCeeEEeeeCCCCceeeeeeeC Q lcl|Aclame:pro 56 IAKRAQALARLPVKCMFTSGDTETEEHDTGYAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQKNKSGTPEKLMPMH 135 (518) Q Consensus 56 v~~ia~~ia~lp~~v~~~~~~~~~~~~~~~~~~l~~~PN~~~t~~~f~~~~~~~~ll~G~~~~~i~~~~~G~~~~l~~l~ 135 (518) |...++.+++ .-+||+.||..+|++ ++.+++++||+|++++++..|++++|+|++ T Consensus 81 l~~k~n~l~~------------------------~~~Pnp~~t~~~f~~-~v~d~ll~Gnay~~~~r~~~G~~~~L~~l~ 135 (351) T protein:vir:79 81 LFFKANVLAS------------------------TFRPHRWLSRHAFER-WALDFLTFGNGYLERRRNMVGGTLRLEPAL 135 (351) T ss_pred hhhhhhHHhh------------------------cccCCCCCCHHHHHH-HHHHHHhcCCeEEEEEECCCCCEEEEEEeC Confidence 6554444433 237999999999965 678999999999999999999999999999 Q ss_pred CcceEEEeccCcceEEEEeeccCCCCceeEEEeeeeeEEeecCCCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHccC Q lcl|Aclame:pro 136 PSRVAIKRNSRTGRYEYYFQAGAGVGTQLVSFADDEVVPIRFFNPDGLERGLSLMESLKSTIFSEDSSRNATAAMWKNAG 215 (518) Q Consensus 136 p~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~ 215 (518) |.+|++..+.++ +|.+. .+++.+.|++++||||+.+++.+.+||+|++..+..++....+++.|+.++|+||+ T Consensus 136 ~~~v~~~~~~~~---~~~~~----~~g~~~~~~~~eIihir~~~~~~~~yGl~~~~~a~~si~l~~~a~~~~~~~f~NGa 208 (351) T protein:vir:79 136 AKYVRRKADFSG---FVYVN----GWQERHEFEPDSVFQLVRPDINQEVYGLPEYLSSLHSAWLNESSTLFRRKYYENGS 208 (351) T ss_pred CcceeeeecCCe---EEEEe----cCceEEEEcCccEEEeCCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhccC Confidence 999998876553 12221 24567889999999999999988899999999999999999999999999999999 Q ss_pred CcceeeeeCC-cCCHHHHHHHHHHHHHHhcCccccccceec-----cCCcccccccCChhhHHHHHHHHHHHHHHHHHhc Q lcl|Aclame:pro 216 RPNLVLRHEK-RLSPEAQQRLREQFDRAHAGSSNTGKTMVV-----EEGMEPIPLQLTAVEMQFIEARQLNREEVCGVYD 289 (518) Q Consensus 216 ~p~gil~~~~-~~~~e~~~~~~~~~~~~~~g~~n~g~~~vl-----~~g~~~~~~~~~~~d~q~~e~~~~~~~~Ia~~fg 289 (518) +|++||..++ .+++++.++++++|++ ..|.+|+++++++ ++|++|++++.++.|+||+|.+++++++||++|| T Consensus 209 ~pg~il~~~~~~ls~e~~~~lk~~~~~-~~G~~N~~~~~v~~~~g~~~gi~~~pl~~~~~d~ef~e~k~~s~~eI~~a~~ 287 (351) T protein:vir:79 209 HAGFILYMTDAAQKQDDVDNMRDALKN-AKGPGNFRNVFMYAPGGKKDGIQLIPVSEVAAKDEFFNIKNVTRDDLLAAHR 287 (351) T ss_pred CCceEEEecCCCCCHHHHHHHHHHHHH-hcCccccCceeEecCCCCccceEEEEcCCChhHHHHHHHHHHhHHHHHHHhC Confidence 9999998764 6899999999999987 6788999999988 5789999999999999999999999999999999 Q ss_pred cchHhhccccc--cccccHHHHHHHHHHHHHHHHHHHHHHHHHhhhcchhhccceeeechhhhhccCHHH Q lcl|Aclame:pro 290 IAPPIVHILDR--ATFSNISAQMRAFYRDTMAIPIARIQSAMDKYVGQYWVRKNRMKFDIDDVIQPDWEA 357 (518) Q Consensus 290 Vpp~~lg~~~~--~~~s~~e~~~~~~~~~~l~P~~~~ie~~ln~~l~~~~~~~~~~~fd~~~l~~~d~~~ 357 (518) |||.++|+.++ ++++|+|++.+.|++++|.|+++.||+ +|.+|.. ..++|+...++++|.++ T Consensus 288 VPp~llGi~~~~t~~~~n~e~~~~~f~~~~l~Pl~~~ie~-ln~~lg~-----~~~~F~~~~llr~d~~a 351 (351) T protein:vir:79 288 VPPQLLGIVPSNSGGFGTPDTAARVFGRNEIRPLQARFAE-LNDWLGD-----EVVTFDDYEIPPAPVAA 351 (351) T ss_pred CCHHHhcccCCCCCCcccHHHHHHHHHHHHHHHHHHHHHH-HHhhcCc-----ceeeeChhhhccccccC Confidence 99999998654 568999999999999999999999985 7877742 25799999999999987 No 93 >protein:vir:78191 Length: 351 # NCBI annotation: gp5, phage portal protein, pbsx family # Family: family:all:196 # MgeID: mge:1848 # MgeName: phiE12-2 # Cross-refs: genbank:acc:YP_001111155;genbank:gi:134288732;genbank:GeneID:4960651 Probab=100.00 E-value=1.5e-57 Score=332.11 Aligned_cols=316 Identities=17% Similarity=0.265 Sum_probs=245.2 Q ss_pred CCCCCCCccccccc--------cchhhhhhhc-----------------cCccCCcccCc--cchhhHHHHhhhHHHHHH Q lcl|Aclame:pro 3 LANGQTLSAPAMAE--------LSPQMQDSYY-----------------YAPAVGMQLER--QFSLYGGIYKNQPWVRTV 55 (518) Q Consensus 3 f~~~~~~~~~~~~~--------~~~~~~~~~~-----------------~~~~~~~~~~~--~~~~~~~~~~~~~~v~~~ 55 (518) |.+++......... ..+.-...|. +.+..|..+.+ .......++..++.+.+| T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~~pp~~~~~la~~~~~~~~h~~~ 80 (351) T protein:vir:78 1 MSKRRSRAPRTFAAAPNPSAGSAAPARAEVFTFDDPTPVMNRAEILDYVECWSNGEWFEPPVSFAGLAKSFRASTHHSSA 80 (351) T ss_pred CCCCCCCCCCCCCCCCchhhhhcccceeEEEEcCCceeecCcchhhhhhhhhccCceecCCCCHHHHHHHHhhhHhhhhh Confidence 44332221110000 0000000111 11111111111 112223445556666666 Q ss_pred HHHHHHhhccCceEEEEecCCceeeecchHHHHHhhccCccCCHHHHHHHHHHHHHHcCCeeEEeeeCCCCceeeeeeeC Q lcl|Aclame:pro 56 IAKRAQALARLPVKCMFTSGDTETEEHDTGYAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQKNKSGTPEKLMPMH 135 (518) Q Consensus 56 v~~ia~~ia~lp~~v~~~~~~~~~~~~~~~~~~l~~~PN~~~t~~~f~~~~~~~~ll~G~~~~~i~~~~~G~~~~l~~l~ 135 (518) |...++.+++ .-+||+.||.++|++ ++.+++++||+|++++++..|++++|+|++ T Consensus 81 l~~k~n~l~~------------------------~~~Pn~~~t~~~f~~-~~~d~ll~Gnay~~~~rn~~G~~~~L~pl~ 135 (351) T protein:vir:78 81 LFFKANVLAS------------------------TFRPHRWLSRHAFER-WALDFLTFGNGYLERRRNMVGGTLRLEPAL 135 (351) T ss_pred hhhhhhHHhh------------------------cccCCCCCCHHHHHH-HHHHHHhcCCeEEEEEECCCCCEEEEEEec Confidence 6555544433 237999999999975 567899999999999999999999999999 Q ss_pred CcceEEEeccCcceEEEEeeccCCCCceeEEEeeeeeEEeecCCCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHccC Q lcl|Aclame:pro 136 PSRVAIKRNSRTGRYEYYFQAGAGVGTQLVSFADDEVVPIRFFNPDGLERGLSLMESLKSTIFSEDSSRNATAAMWKNAG 215 (518) Q Consensus 136 p~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~ 215 (518) |.+|++..+.++ |.+.. .+++.+.|++++||||+.+++...+||+|++..+..++....++..|++++|+||+ T Consensus 136 ~~~v~~~~~~~~----~~~~~---~~~~~~~~~~~eVihir~~~~~~~~yGl~~~~~a~~si~l~~~a~~~~~~~f~NGa 208 (351) T protein:vir:78 136 AKYVRRKADFSG----FVYVN---GWQERHEFAPDSVFQLVRPDINQEVYGLPEYLSSLHSAWLNESSTLFRRKYYENGS 208 (351) T ss_pred CcceEEeeeCCe----EEEEe---cCCeEEEEccccEEEEcCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhccC Confidence 999998876543 22211 23566889999999999999888899999999999999999999999999999999 Q ss_pred CcceeeeeCC-cCCHHHHHHHHHHHHHHhcCccccccceec-----cCCcccccccCChhhHHHHHHHHHHHHHHHHHhc Q lcl|Aclame:pro 216 RPNLVLRHEK-RLSPEAQQRLREQFDRAHAGSSNTGKTMVV-----EEGMEPIPLQLTAVEMQFIEARQLNREEVCGVYD 289 (518) Q Consensus 216 ~p~gil~~~~-~~~~e~~~~~~~~~~~~~~g~~n~g~~~vl-----~~g~~~~~~~~~~~d~q~~e~~~~~~~~Ia~~fg 289 (518) +|++||..++ .+++++.++++++|++ ..|.+|+|+++|+ ++|+++++++.++.|+||+|.+++++++||++|| T Consensus 209 ~pggIl~~~~~~ls~e~~~~lr~~~~~-~~G~~N~~~~~v~~~~g~~~g~k~~pls~~~~d~qf~e~k~~~~~eIa~a~~ 287 (351) T protein:vir:78 209 HAGFILYMTDAAQKQDDVDNMRDALKN-AKGPGNFRNVFMYAPGGKKDGIQLIPVSEVAAKDEFFNIKNVTRDDLLAAHR 287 (351) T ss_pred CCceEEEecCCCCCHHHHHHHHHHHHH-hcCcccccceeeecCCCCccceeEEEcCCChhHHHHHHHHHHhHHHHHHHhC Confidence 9999998864 7899999999999987 6888999999998 5789999999999999999999999999999999 Q ss_pred cchHhhccccc--cccccHHHHHHHHHHHHHHHHHHHHHHHHHhhhcchhhccceeeechhhhhccCHHH Q lcl|Aclame:pro 290 IAPPIVHILDR--ATFSNISAQMRAFYRDTMAIPIARIQSAMDKYVGQYWVRKNRMKFDIDDVIQPDWEA 357 (518) Q Consensus 290 Vpp~~lg~~~~--~~~s~~e~~~~~~~~~~l~P~~~~ie~~ln~~l~~~~~~~~~~~fd~~~l~~~d~~~ 357 (518) |||.++|+.++ ++++|+|++.+.|++++|.|+++.||+ ++.+|..+ .++|+...|+++|.++ T Consensus 288 VPp~llGi~~~~t~~~sn~e~~~~~f~~~~l~P~~~~iee-~n~~l~~~-----~~~F~~~~Llr~d~ka 351 (351) T protein:vir:78 288 VPPQLLGIVPSNSGGFGTPDTAARVFGRNEIRPLQARFAE-LNDWLGDE-----VVRFDDYEIPPAPVAA 351 (351) T ss_pred CCHHHhcccCCCCCCcccHHHHHHHHHHHHHHHHHHHHHH-HHhhcCcc-----ceecChhhhccccccC Confidence 99999998654 568999999999999999999999985 77776432 5899999999999987 No 94 >protein:vir:98567 Length: 340 # NCBI annotation: gp1 # Family: family:all:196 # MgeID: mge:1533 # MgeName: PSP3 # Cross-refs: genbank:acc:NP_958056;genbank:gi:41057353;genbank:GeneID:2744238 Probab=100.00 E-value=1.8e-57 Score=331.71 Aligned_cols=313 Identities=15% Similarity=0.213 Sum_probs=241.6 Q ss_pred CCCCCCCCccccccccchhhhhhhccCccCCcccCcc-------------------chhhHHHHhhhHHHHHHHHHHHHh Q lcl|Aclame:pro 2 LLANGQTLSAPAMAELSPQMQDSYYYAPAVGMQLERQ-------------------FSLYGGIYKNQPWVRTVIAKRAQA 62 (518) Q Consensus 2 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~v~~~v~~ia~~ 62 (518) |..++ ..++.+.....+.-...|.......+...++ ....+.++..++.+.+||...++. T Consensus 1 m~~~~-~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~pp~~~~~la~l~~a~~~h~s~i~~k~n~ 79 (340) T protein:vir:98 1 MSKRK-PRKAVAMTASAPQKMEAFTFGEPVPVLDKRDILDYVECISNGKWYEPPVSFSGLAKSLRSAVHHSSPIYVKRNV 79 (340) T ss_pred CCCCC-CCccccccccCccceeEEEcCCceeecCcchhhhhhhhhhcCceecCCCCHHHHHHHHHhccccchhhhhhhhH Confidence 55444 3333333222222222222111111100010 111122333344444444443333 Q ss_pred hccCceEEEEecCCceeeecchHHHHHhhccCccCCHHHHHHHHHHHHHHcCCeeEEeeeCCCCceeeeeeeCCcceEEE Q lcl|Aclame:pro 63 LARLPVKCMFTSGDTETEEHDTGYAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQKNKSGTPEKLMPMHPSRVAIK 142 (518) Q Consensus 63 ia~lp~~v~~~~~~~~~~~~~~~~~~l~~~PN~~~t~~~f~~~~~~~~ll~G~~~~~i~~~~~G~~~~l~~l~p~~v~~~ 142 (518) +++ .-+||++||..+|++ ++.+++++||+|++++++..|++++|+|+++.+|++. T Consensus 80 l~~------------------------~~~Pn~~lt~~~f~~-~~~d~ll~Gnay~~~~rn~~G~~~~L~pl~~~~vr~~ 134 (340) T protein:vir:98 80 LAS------------------------TYIPHPLLSRQDFSR-FALDYLVFGNAFLEQRHSVTGQLIKLLTSPAKYTRRG 134 (340) T ss_pred Hhh------------------------ccCCCCCCCHHHHHH-HHHHHHhcCCeEEEEEECCCCcEEEEEEeCCceEEEc Confidence 322 237999999999965 6679999999999999999999999999999999986 Q ss_pred eccCcceEEEEeeccCCCCceeEEEeeeeeEEeecCCCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHccCCcceeee Q lcl|Aclame:pro 143 RNSRTGRYEYYFQAGAGVGTQLVSFADDEVVPIRFFNPDGLERGLSLMESLKSTIFSEDSSRNATAAMWKNAGRPNLVLR 222 (518) Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~p~gil~ 222 (518) .+.+ .+|.+.. +++.+.|++++||||+.+++...+||+|++..+..++....+++.|++++|+||++|++||. T Consensus 135 ~~~~---~~~~~~~----~~~~~~~~~~eViHir~~~~~~~~~Gls~~~~a~~si~l~~aa~~~~~~~f~NGa~pg~il~ 207 (340) T protein:vir:98 135 VDDS---VFWFVEN----FTQPHEFAPDTVFHLLEPDINQEIYGLPEYLSALNSAWLNESATLFRRKYYQNGAHAGYIMY 207 (340) T ss_pred ccCc---EEEEEec----CCeEEEEccccEEEEcCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEE Confidence 6432 3444432 45668899999999999998888999999999999999999999999999999999999998 Q ss_pred eCC-cCCHHHHHHHHHHHHHHhcCccccccceec-----cCCcccccccCChhhHHHHHHHHHHHHHHHHHhccchHhhc Q lcl|Aclame:pro 223 HEK-RLSPEAQQRLREQFDRAHAGSSNTGKTMVV-----EEGMEPIPLQLTAVEMQFIEARQLNREEVCGVYDIAPPIVH 296 (518) Q Consensus 223 ~~~-~~~~e~~~~~~~~~~~~~~g~~n~g~~~vl-----~~g~~~~~~~~~~~d~q~~e~~~~~~~~Ia~~fgVpp~~lg 296 (518) +++ .+++++.++++++|++ ..|..|.++++|+ ++|++|++++.++.|+||++++++++++||++|||||.++| T Consensus 208 ~~~~~ls~e~~~~lk~~~~~-~~G~~n~~~~~vl~~~g~~~g~~~~pls~~~~d~qf~e~k~~~~~eIa~a~~VPp~llG 286 (340) T protein:vir:98 208 VTDPAQSATDVESLRDAMRN-SKGLGNFKNLFFYSPNGKPDGIKIVPLSEVATKDDFFNIKKASAADLMDAHRVPFQLMG 286 (340) T ss_pred ecCCCCCHHHHHHHHHHHHH-hcCccccCceeEecCCCCccceEEEEcCCChhHHHHHHHHHhhHHHHHHHhCCCHHHhc Confidence 875 6999999999999998 5888999999998 57899999999999999999999999999999999999999 Q ss_pred cccc--cccccHHHHHHHHHHHHHHHHHHHHHHHHHhhhcchhhccceeeechhhhhccC Q lcl|Aclame:pro 297 ILDR--ATFSNISAQMRAFYRDTMAIPIARIQSAMDKYVGQYWVRKNRMKFDIDDVIQPD 354 (518) Q Consensus 297 ~~~~--~~~s~~e~~~~~~~~~~l~P~~~~ie~~ln~~l~~~~~~~~~~~fd~~~l~~~d 354 (518) +.++ ++++|+|++.+.|++++|.|++..|| ++|.+|..+ .++|+...+++.| T Consensus 287 i~~~~t~~~sn~e~~~~~f~~~~l~Pl~~~ie-e~n~~L~~e-----~~rF~~~~l~~~d 340 (340) T protein:vir:98 287 GKPENIGSLGDVEKVAKVFVRNELSPLQDRFR-EVNDWLGME-----VIRFKEYTLDNPE 340 (340) T ss_pred ccCCCCCccccHHHHHHHHHHHHHHHHHHHHH-HHHhccccc-----ccccCccccccCC Confidence 8654 56899999999999999999999999 488888654 3679988999888 No 95 >protein:vir:100328 Length: 346 # NCBI annotation: capsid portal protein Q # Family: family:all:196 # MgeID: mge:1484 # MgeName: phi-MhaA1-PHL101 # Cross-refs: genbank:acc:YP_655469;genbank:gi:109289937;genbank:GeneID:4157371 Probab=100.00 E-value=4e-57 Score=329.75 Aligned_cols=332 Identities=14% Similarity=0.215 Sum_probs=246.8 Q ss_pred CCCCCCCccccccccch-hhhhhhccCccCCcccCc--cchhhHHHHhhhH-HHHHH--HHHHHHhhccCceEEEEecCC Q lcl|Aclame:pro 3 LANGQTLSAPAMAELSP-QMQDSYYYAPAVGMQLER--QFSLYGGIYKNQP-WVRTV--IAKRAQALARLPVKCMFTSGD 76 (518) Q Consensus 3 f~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~-~v~~~--v~~ia~~ia~lp~~v~~~~~~ 76 (518) |+++....++......+ ...+.|+.... .++.. ....+.+.+..+. ++.-. ..-+|+.+...+.+- T Consensus 1 m~~~~~~~~~~~~~~~~~~~~~~~~~~~p--~~~~~~~~~~~~~~~~~~~~~~~~pp~~~~~la~l~~~~~~h~------ 72 (346) T protein:vir:10 1 MKKQLRKNLTQNDRLQPQAQTEIFSFGDP--IPVLDRADILNYLECSAMYEKWYNPPMSFDGLAKSLRSSTHHE------ 72 (346) T ss_pred CCcccCCCCCcccccccccCeEEEecCCc--ceecCchhHHHHHHHhhcCCceEecCCCHHHHHHHHHhhhhcc------ Confidence 66654444432211111 11122222111 11111 1111222221111 11000 112233222223221 Q ss_pred ceeeecchHHHHHhhccCccCCHHHHHHHHHHHHHHcCCeeEEeeeCCCCceeeeeeeCCcceEEEeccCcceEEEEeec Q lcl|Aclame:pro 77 TETEEHDTGYAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQKNKSGTPEKLMPMHPSRVAIKRNSRTGRYEYYFQA 156 (518) Q Consensus 77 ~~~~~~~~~~~~l~~~PN~~~t~~~f~~~~~~~~ll~G~~~~~i~~~~~G~~~~l~~l~p~~v~~~~~~~~~~~~~~~~~ 156 (518) .......+.+..++.+||++||+.+|++ ++.+++++||+|++++++..|++++|+|++|.+|++..+.++. .|.+. T Consensus 73 ~~i~~k~n~l~~l~~~Pn~~~t~~~f~~-~~~d~ll~Gnay~~i~r~~~G~~~~L~pl~~~~v~~~~~~~~~--~~~~~- 148 (346) T protein:vir:10 73 SAIITKANILLSTCEVDSRYLSRRDLSS-FVKDYLVFGNAYFEVVRNRLGQVQRIESPLAKYVRKGLEAGQF--YYVPQ- 148 (346) T ss_pred hhhhhhhhhHHHHHhCCCCCCCHHHHHH-HHHHHHhcCCeEEEEEEcCCCcEEEEEEecCCceEEEEcCCeE--EEEEE- Confidence 1112234556778889999999999987 5678999999999999999999999999999999987765432 22221 Q ss_pred cCCCCceeEEEeeeeeEEeecCCCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHccCCcceeeeeC-CcCCHHHHHHH Q lcl|Aclame:pro 157 GAGVGTQLVSFADDEVVPIRFFNPDGLERGLSLMESLKSTIFSEDSSRNATAAMWKNAGRPNLVLRHE-KRLSPEAQQRL 235 (518) Q Consensus 157 ~~~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~p~gil~~~-~~~~~e~~~~~ 235 (518) ..+++.+.|++++|||+|.+++.+..||+|++..+..++....+++.|+.++|+||++|++||+++ ..+++++.+++ T Consensus 149 --~~~g~~~~~~~~dIih~r~~~~~~~~~G~~~~~~a~~si~l~~~a~~~~~~~~~NG~~~~~il~~~d~~l~~e~~~~i 226 (346) T protein:vir:10 149 --RFDHQEHEFAKGSIYHLLEPDINQDIYGLPQYLSALQSAWLNESATLFRRKYFLNGAHAGFVFYMSDASQKQEDVENI 226 (346) T ss_pred --ccCCeEEEEecccEEEecCCCCCCCeeeccHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEeCCCCCCHHHHHHH Confidence 234567889999999999999888889999999999999999999999999999999999999886 46899999999 Q ss_pred HHHHHHHhcCccccccceeccC-----CcccccccCChhhHHHHHHHHHHHHHHHHHhccchHhhccccc--cccccHHH Q lcl|Aclame:pro 236 REQFDRAHAGSSNTGKTMVVEE-----GMEPIPLQLTAVEMQFIEARQLNREEVCGVYDIAPPIVHILDR--ATFSNISA 308 (518) Q Consensus 236 ~~~~~~~~~g~~n~g~~~vl~~-----g~~~~~~~~~~~d~q~~e~~~~~~~~Ia~~fgVpp~~lg~~~~--~~~s~~e~ 308 (518) +++|++. .|.+|+|+++|+.+ |+++++++.++.|+||+|.+++++++||++|||||.++|+.++ ++++++|+ T Consensus 227 ~~~~~~~-~g~~n~~~~~vl~~~~~~~gi~~~pis~~~~d~qf~e~k~~~~~~I~~af~VPp~llG~~~~~~~~~s~~e~ 305 (346) T protein:vir:10 227 RQQLKQS-KGVGNFKNLFVHAPNGKKDGIQIIPIADVSAKDEFFNIKNVSRDDVLAAHRVPPQLMGIIPNNTGGFGNVAD 305 (346) T ss_pred HHHHHHh-cCccccCceeEecCCCCccceeEEecCCChhHHHHHHHHHHhHHHHHHHhCCCHHHhcccCCCCCCcccHHH Confidence 9999986 46789999999854 7889999999999999999999999999999999999998654 46899999 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhcchhhccceeeechhhhhccCH Q lcl|Aclame:pro 309 QMRAFYRDTMAIPIARIQSAMDKYVGQYWVRKNRMKFDIDDVIQPDW 355 (518) Q Consensus 309 ~~~~~~~~~l~P~~~~ie~~ln~~l~~~~~~~~~~~fd~~~l~~~d~ 355 (518) +.+.|++++|.|++++||+ +|.+|.. ..++|+...|++.|. T Consensus 306 ~~~~f~~~~l~P~~~~iee-~n~~L~~-----e~i~F~~~~ll~~~~ 346 (346) T protein:vir:10 306 AAEVFFITEIEPLQERLKE-FNQWLGQ-----EVIKFKPSKLLQRTQ 346 (346) T ss_pred HHHHHHHHHHHHHHHHHHH-HHhhccc-----ceeeechhhhcccCC Confidence 9999999999999999985 7777743 258899999999997 No 96 >protein:vir:267 Length: 348 # NCBI annotation: putative capsid portal protein # Family: family:all:196 # MgeID: mge:7 # MgeName: K139 # Cross-refs: genbank:acc:NP_536647;genbank:gi:17975125;genbank:GeneID:929081 Probab=100.00 E-value=4.8e-57 Score=329.32 Aligned_cols=319 Identities=12% Similarity=0.083 Sum_probs=241.5 Q ss_pred CCCCCCCCCccccccccchhhhhhhccC-ccCCcccCccchhhHHHHhhhHHHHHHHHHHHHhhccCceEEEEecCCcee Q lcl|Aclame:pro 1 MLLANGQTLSAPAMAELSPQMQDSYYYA-PAVGMQLERQFSLYGGIYKNQPWVRTVIAKRAQALARLPVKCMFTSGDTET 79 (518) Q Consensus 1 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~v~~~v~~ia~~ia~lp~~v~~~~~~~~~ 79 (518) .-||..+. +.-..+.+...+.-.+.+. ..--.++ .......++..++.+.+||...++.+++ T Consensus 20 ~~~~~~p~-~~~~~~~~~~~~~~~~~~~~~~~epp~--~~~~La~l~~~n~~h~~~i~~k~N~l~~-------------- 82 (348) T protein:vir:26 20 YSFDPNPE-PVDTNSWMTRYCELFYNDFDDYWEPPI--SLKGLAEIANANGYHGSLLKARANYVAG-------------- 82 (348) T ss_pred EEecCCCe-eecCcchHHHHHHHHhcCCCccccCCC--CHHHHHHHHhhhhhhhhhHhhhhhHHhh-------------- Confidence 12221000 0000111111111111000 0000011 1223345556677777777666655443 Q ss_pred eecchHHHHHhhccCccCCHHHHHHHHHHHHHHcCCeeEEeeeCCCCceeeeeeeCCcceEEEeccCcceEEEEeeccCC Q lcl|Aclame:pro 80 EEHDTGYAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQKNKSGTPEKLMPMHPSRVAIKRNSRTGRYEYYFQAGAG 159 (518) Q Consensus 80 ~~~~~~~~~l~~~PN~~~t~~~f~~~~~~~~ll~G~~~~~i~~~~~G~~~~l~~l~p~~v~~~~~~~~~~~~~~~~~~~~ 159 (518) .-+||+++|..+|++. +.+++++||+|++++|+..|++++|+|++|.+|++..+.. +|.+.. T Consensus 83 ----------~~~Pn~~~t~~~f~~~-~~d~ll~Gnay~~~~rn~~G~~~~L~~l~~~~v~~~~d~~----~~~~~~--- 144 (348) T protein:vir:26 83 ----------RFMNGGGLPMYKMNSA-CWDYFGLGMSAFVKIRSYLKNVIALEPLPMVHMRKRKNGD----FVQLLR--- 144 (348) T ss_pred ----------cccCCCCCCHHHHHHH-HHHHHhcCCeEEEEEEcCCCcEEEEEEecCceeEeeecCc----EEEEEe--- Confidence 2269999999999765 5799999999999999999999999999999999876532 233322 Q ss_pred CCceeEEEeeeeeEEeecCCCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHccCCcceeeeeCC-cCCHHHHHHHHHH Q lcl|Aclame:pro 160 VGTQLVSFADDEVVPIRFFNPDGLERGLSLMESLKSTIFSEDSSRNATAAMWKNAGRPNLVLRHEK-RLSPEAQQRLREQ 238 (518) Q Consensus 160 ~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~p~gil~~~~-~~~~e~~~~~~~~ 238 (518) ++..+.|++++||||+.+++.+.+||+|++..+.+++....+++.|++++|+||++|++||..++ .+++++.++++++ T Consensus 145 -~g~~~~f~~~dIiHir~~~~~~~~~Gls~~~~a~~si~l~~~a~~~~~~~f~NGa~pg~Il~~~~~~ls~e~~~~lk~~ 223 (348) T protein:vir:26 145 -NNEQKVFKAKDVIFIPQYDPQQQIYGLPDYLGSIQSSLLNRDATLFRRRYYLNGAHMGFIFYATDPNLSEADEKALKEK 223 (348) T ss_pred -cCeEEEEcCccEEEEcCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEecCCCCCHHHHHHHHHH Confidence 34567899999999999998888999999999999999999999999999999999999998764 6999999999999 Q ss_pred HHHHhcCccccccceec-----cCCcccccccCChhhHHHHHHHHHHHHHHHHHhccchHhhccc--cccccccHHHHHH Q lcl|Aclame:pro 239 FDRAHAGSSNTGKTMVV-----EEGMEPIPLQLTAVEMQFIEARQLNREEVCGVYDIAPPIVHIL--DRATFSNISAQMR 311 (518) Q Consensus 239 ~~~~~~g~~n~g~~~vl-----~~g~~~~~~~~~~~d~q~~e~~~~~~~~Ia~~fgVpp~~lg~~--~~~~~s~~e~~~~ 311 (518) |++. .|.+|.++++++ ++|+++++++.++.|+||++.+++++++||++|||||.++|+. ++++++|++++.+ T Consensus 224 ~~~~-~G~~n~~~~~vl~~~g~~~Gi~~~pis~~~~d~qf~e~k~~t~~dIa~af~VPp~llGi~~~~~~~~sn~e~~~~ 302 (348) T protein:vir:26 224 IASS-KGIGNFRSMFVNIPNGKEKGIQLIPVGDIATKDEFERIKNITAQDIFVGHRFPAGMGGMLPQQGANVPDPLKVSQ 302 (348) T ss_pred HHHh-cCcccccceeEEcCCCCccceeEEEccCChhHHHHHHHHHhhHHHHHHHhCCCHHHccccCCCCCccccHHHHHH Confidence 9986 677899999998 7899999999999999999999999999999999999999974 3478999999999 Q ss_pred HHHHHHHHHHHHHHHHHHHhhhcchhhccceeeechhh-hhccCHHHHHHH Q lcl|Aclame:pro 312 AFYRDTMAIPIARIQSAMDKYVGQYWVRKNRMKFDIDD-VIQPDWEAKSES 361 (518) Q Consensus 312 ~~~~~~l~P~~~~ie~~ln~~l~~~~~~~~~~~fd~~~-l~~~d~~~~~~~ 361 (518) .|++++|.|++..||++||++|... ...+++||++. ..+.|.. .+ T Consensus 303 ~f~~~~l~P~~~~ie~~ln~~l~~~--~~~~~~fdl~~~~e~~~~~---a~ 348 (348) T protein:vir:26 303 VYDFYEVIPVCKRFMDAVNNDPEIP--DNLKLKFNLNPGVESANGS---AV 348 (348) T ss_pred HHHHHHHHHHHHHHHHHHhhhhCCC--CccEEEEecCcccccchhh---cC Confidence 9999999999999999999998643 34567777654 2333322 22 No 97 >protein:vir:3743 Length: 345 # NCBI annotation: orf15 # Family: family:all:196 # MgeID: mge:79 # MgeName: HP1 # Cross-refs: genbank:acc:NP_043484;genbank:gi:9628619;genbank:GeneID:1261113 Probab=100.00 E-value=2.1e-56 Score=325.88 Aligned_cols=320 Identities=10% Similarity=0.132 Sum_probs=242.1 Q ss_pred CCCCCCCccccccccchhhhhhhccC-------------cc--CCcccCc--cchhhHHHHhhhHHHHHHHHHHHHhhcc Q lcl|Aclame:pro 3 LANGQTLSAPAMAELSPQMQDSYYYA-------------PA--VGMQLER--QFSLYGGIYKNQPWVRTVIAKRAQALAR 65 (518) Q Consensus 3 f~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~--~~~~~~~--~~~~~~~~~~~~~~v~~~v~~ia~~ia~ 65 (518) |.+...++..+....++.-...|+.. +. .|....+ .......++..|+.+.+||...++.++ T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~epp~~~~~la~~~~~~~~h~~~i~~k~n~l~- 79 (345) T protein:vir:37 1 MKTNVKTDNKKGIVIAPINDRTFSLSEITASPALDYVGIGFDENYNCYLPPVNRHALAKLPHQNAQHGGILHSRANMVS- 79 (345) T ss_pred CCccccccchhhhcCCCceEEEeecCCcccchhhcccceeeecCCccccCCCCHHHHHHHhhcchhhcchhhhhhhHHh- Confidence 33322222221111111111111111 10 1111111 112223445566666666655554442 Q ss_pred CceEEEEecCCceeeecchHHHHHhhccCccCCHHHHHHHHHHHHHHcCCeeEEeeeCCCCceeeeeeeCCcceEEEecc Q lcl|Aclame:pro 66 LPVKCMFTSGDTETEEHDTGYAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQKNKSGTPEKLMPMHPSRVAIKRNS 145 (518) Q Consensus 66 lp~~v~~~~~~~~~~~~~~~~~~l~~~PN~~~t~~~f~~~~~~~~ll~G~~~~~i~~~~~G~~~~l~~l~p~~v~~~~~~ 145 (518) ..-+||+.||+.+|++ ++.+++++||+|++++++..|++++|+|++|.+|++..+. T Consensus 80 -----------------------~~~~Pn~~~t~~~f~~-~v~d~ll~Gnay~~i~rn~~G~~~~L~pl~~~~vr~~~d~ 135 (345) T protein:vir:37 80 -----------------------ATYEGGKALSKMEMRA-LCLNLIQFGDVGLLKVRNGFGQVVRLVPLSSLYLRVHKDG 135 (345) T ss_pred -----------------------hccCCCCCCCHHHHHH-HHHHHHhcCCeEEEEEECCCCCEEEEEEecCceeEEeecC Confidence 2338999999999975 5678999999999999999999999999999999987754 Q ss_pred CcceEEEEeeccCCCCceeEEEeeeeeEEeecCCCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHccCCcceeeeeCC Q lcl|Aclame:pro 146 RTGRYEYYFQAGAGVGTQLVSFADDEVVPIRFFNPDGLERGLSLMESLKSTIFSEDSSRNATAAMWKNAGRPNLVLRHEK 225 (518) Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~p~gil~~~~ 225 (518) ... ++.........+..+.|++++||||+.+++.+.+||+|++..+..++....++++|++++|+||++|++||..+. T Consensus 136 ~~~--~~~~~~~~~~~g~~~~~~~~eViHir~~~~~~~~~Gl~~~~~a~~si~l~~~a~~~~~~~f~NGa~~~~Il~~t~ 213 (345) T protein:vir:37 136 GYS--YLMKKSLYDTAQEIYRYDAKDIIFIKLYDPMQQVYGSPDYVGGIQSALLNSDATVFRRRYFSNGAHMGFILYSTD 213 (345) T ss_pred Cee--EEEeeeeeccCceEEEEccccEEEEcCCCCCCCcccchHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEeCC Confidence 332 221111122346678899999999999998888999999999999999999999999999999999999998764 Q ss_pred -cCCHHHHHHHHHHHHHHhcCccccccceec-----cCCcccccccCChhhHHHHHHHHHHHHHHHHHhccchHhhcccc Q lcl|Aclame:pro 226 -RLSPEAQQRLREQFDRAHAGSSNTGKTMVV-----EEGMEPIPLQLTAVEMQFIEARQLNREEVCGVYDIAPPIVHILD 299 (518) Q Consensus 226 -~~~~e~~~~~~~~~~~~~~g~~n~g~~~vl-----~~g~~~~~~~~~~~d~q~~e~~~~~~~~Ia~~fgVpp~~lg~~~ 299 (518) .+++++.++++++|++.+.+ +|.+.++++ ++|+++++++.++.|+||++.+++++++||++|||||.++|+.+ T Consensus 214 ~~l~~e~~~~lk~~~~~~~g~-~n~~~~~i~~~~g~~~G~~~~pl~~~~~d~qf~e~k~~~~~dI~~a~~VPp~liGi~~ 292 (345) T protein:vir:37 214 PDLTEEMEEEIARKISESKGV-GNFRSMFVNIAGGHPDGLKVIPIGDTGTKDEFANIKNISAQDVLTAHRFPAGLSGIIP 292 (345) T ss_pred CCCCHHHHHHHHHHHHHhcCc-cccCceeEecCCCCccceeEEEccCChhHHHHHHHHHHhHHHHHHHhCCCHHHhcccc Confidence 79999999999999998644 566666555 56899999999999999999999999999999999999999865 Q ss_pred --ccccccHHHHHHHHHHHHHHHHHHHHHHHHHhhhcchhhccceeeechhhhhc Q lcl|Aclame:pro 300 --RATFSNISAQMRAFYRDTMAIPIARIQSAMDKYVGQYWVRKNRMKFDIDDVIQ 352 (518) Q Consensus 300 --~~~~s~~e~~~~~~~~~~l~P~~~~ie~~ln~~l~~~~~~~~~~~fd~~~l~~ 352 (518) +++++++|++.+.|++++|.|++.+|+++||+. ++....+.++||..+|++ T Consensus 293 ~~t~~~s~~e~~~~~f~~~~l~P~~~~ie~~ln~~--~e~~~~~~i~F~~~~l~k 345 (345) T protein:vir:37 293 TNTGGLGDPLKYREVYHYDEVMPLQEIIAETINQD--PEIKNLLKIKFREQNFAK 345 (345) T ss_pred CCCCCcccHHHHHHHHHHHHHHHHHHHHHHHhhhh--hccCCcceEEECchhhcC Confidence 456899999999999999999999999999974 344567889999999988 No 98 >protein:vir:1150 Length: 350 # NCBI annotation: predicted capsid packaging protein # Family: family:all:196 # MgeID: mge:24 # MgeName: phi CTX # Cross-refs: genbank:acc:NP_490599;genbank:gi:17313219;genbank:GeneID:927315 Probab=100.00 E-value=3.1e-56 Score=324.90 Aligned_cols=328 Identities=15% Similarity=0.188 Sum_probs=234.0 Q ss_pred CCCCCCCcccccccc---------c--hhhhhhhc-cCccCCcccCccchhhHHHHhhhHHHHHHHHH--HHHhhccCce Q lcl|Aclame:pro 3 LANGQTLSAPAMAEL---------S--PQMQDSYY-YAPAVGMQLERQFSLYGGIYKNQPWVRTVIAK--RAQALARLPV 68 (518) Q Consensus 3 f~~~~~~~~~~~~~~---------~--~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~v~~~v~~--ia~~ia~lp~ 68 (518) |.|++.......+.. . ......|. +.+. .+...++...+.+.+....++.--|++ +|+.+..-+. T Consensus 1 m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~v~~~~~~~~y~~~~~~~~~~~pp~~~~~la~~~~~~~~ 79 (350) T protein:vir:11 1 MSKRRSHRRQQPVTVQSAQEGEFIPRQGGRAEAFTFGDPM-PVLDGRGILDYLECWPNGRWYEPPLSMEGLAKSVGSSVY 79 (350) T ss_pred CCccccCCCcCccccCCcchhhhccccccceEEEEeCCce-eecCcchhhHHHHHhhcCccccCCCCHHHHHHHHhhhhh Confidence 444432211100000 0 00011111 1111 111111112233333332222211211 1222111111 Q ss_pred EEEEecCCceeeecchHHHHHhhccCccCCHHHHHHHHHHHHHHcCCeeEEeeeCCCCceeeeeeeCCcceEEEeccCcc Q lcl|Aclame:pro 69 KCMFTSGDTETEEHDTGYAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQKNKSGTPEKLMPMHPSRVAIKRNSRTG 148 (518) Q Consensus 69 ~v~~~~~~~~~~~~~~~~~~l~~~PN~~~t~~~f~~~~~~~~ll~G~~~~~i~~~~~G~~~~l~~l~p~~v~~~~~~~~~ 148 (518) +- ........ .....-+||++||.++|++ ++.+++++||+|++++++..|++++|+|++|.+|++..+.+ T Consensus 80 h~------~~l~~k~n-~l~~~~~Pn~~~t~~~f~~-~v~d~ll~Gnay~~~~rn~~G~~~~L~~l~~~~vr~~~~~~-- 149 (350) T protein:vir:11 80 LQ------SGLKFKRN-MLAKTFIPHRLLSRATFEQ-FSLDWLTFGSAYLEQPRSRLGTRMPLQAPLAKYMRRGTDLE-- 149 (350) T ss_pred hc------cchhhhhh-hhhhcccCCCCCCHHHHHH-HHHHHHhcCCeEEEEEEcCCCCEEEEEEeCCceeEeeecCC-- Confidence 10 00000001 1112348999999999986 67799999999999999999999999999999999877543 Q ss_pred eEEEEeeccCCCCceeEEEeeeeeEEeecCCCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHccCCcceeeeeCC-cC Q lcl|Aclame:pro 149 RYEYYFQAGAGVGTQLVSFADDEVVPIRFFNPDGLERGLSLMESLKSTIFSEDSSRNATAAMWKNAGRPNLVLRHEK-RL 227 (518) Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~p~gil~~~~-~~ 227 (518) .+|.+. .++..+.|++++||||+.+++.+.+||+||+..+..++....+++.|+.++|+||++|+|||++++ .+ T Consensus 150 -~~~~~~----~~~~~~~~~~~eVihir~~~~~~~~yGls~~~~a~~si~l~~~a~~~~~~~f~NGa~~~gil~~~~~~l 224 (350) T protein:vir:11 150 -TFYQVR----SWKDEHEFEKGSVIQLREADINQEIYGVPEWFCALQSALLNESATLFRRKYYNNGSHAGFILYMTDAAQ 224 (350) T ss_pred -eEEEEe----eCCeEEEECcccEEEeCCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEecCCCC Confidence 234433 245678899999999999999888999999999999999999999999999999999999999874 69 Q ss_pred CHHHHHHHHHHHHHHhcCccccccceec-----cCCcccccccCChhhHHHHHHHHHHHHHHHHHhccchHhhccccc-- Q lcl|Aclame:pro 228 SPEAQQRLREQFDRAHAGSSNTGKTMVV-----EEGMEPIPLQLTAVEMQFIEARQLNREEVCGVYDIAPPIVHILDR-- 300 (518) Q Consensus 228 ~~e~~~~~~~~~~~~~~g~~n~g~~~vl-----~~g~~~~~~~~~~~d~q~~e~~~~~~~~Ia~~fgVpp~~lg~~~~-- 300 (518) ++++++++++.|++. .|.+|+|+++|+ ++|+++++++.++.|+||+|.+++++++||++|||||.++|+..+ T Consensus 225 s~e~~~~l~~~~~~~-~G~~N~~~~~v~~~~g~~~g~~~~pl~~~~~d~qf~e~k~~~~~eIa~a~~VPp~llGi~~~~t 303 (350) T protein:vir:11 225 NEEDIDALRTALKTA-KGPGNFRNLFVYAPNGKKEGIQLIPVSEVAAKDEFGSIKNISRDDQLAGLRVYPQLMGVVPQNA 303 (350) T ss_pred CHHHHHHHHHHHHHh-cCccccCceeeecCCCCccceEEEEcCCChhHHHHHHHHHHhHHHHHHHhCCCHHHhcccCCCC Confidence 999999999999985 778899999988 468999999999999999999999999999999999999998654 Q ss_pred cccccHHHHHHHHHHHHHHHHHHHHHHHHHhhhcchhhccceeeechhhh Q lcl|Aclame:pro 301 ATFSNISAQMRAFYRDTMAIPIARIQSAMDKYVGQYWVRKNRMKFDIDDV 350 (518) Q Consensus 301 ~~~s~~e~~~~~~~~~~l~P~~~~ie~~ln~~l~~~~~~~~~~~fd~~~l 350 (518) ++++|+|++.+.|++++|.|++.+|| ++|.+|..+..+ ..+|++.+| T Consensus 304 ~~~sn~e~~~~~f~~~~L~P~~~~ie-~ln~~l~~~~~~--F~~~~~~~l 350 (350) T protein:vir:11 304 GGFGSISDAAAVWASLELAPMQTRLQ-QVNEMIGEEVVR--FAQFDAPGL 350 (350) T ss_pred CCcCCHHHHHHHHHHHHHHHHHHHHH-HHHhhcCccccc--cCcccccCC Confidence 56999999999999999999999998 588888664322 345677776 No 99 >protein:vir:3780 Length: 345 # NCBI annotation: orf15 # Family: family:all:196 # MgeID: mge:328 # MgeName: HP2 # Cross-refs: genbank:acc:NP_536820;genbank:gi:17981829;genbank:GeneID:929208 Probab=100.00 E-value=1.4e-55 Score=321.36 Aligned_cols=330 Identities=11% Similarity=0.133 Sum_probs=241.7 Q ss_pred CCCCCCCccccccccchhhhhhhccCccCCcccCccchhhHHHH-------hhhHHHHHHHHHHHHhhccCceEEEEecC Q lcl|Aclame:pro 3 LANGQTLSAPAMAELSPQMQDSYYYAPAVGMQLERQFSLYGGIY-------KNQPWVRTVIAKRAQALARLPVKCMFTSG 75 (518) Q Consensus 3 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~v~~~v~~ia~~ia~lp~~v~~~~~ 75 (518) |.+....+.......++.-...|+...-..+.+. .|.+.+ ..-|+-+..+ |+.+-.-+.+- T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~----~y~~~~~~~~~~~~epp~~~~~l---a~l~~~~~~h~----- 68 (345) T protein:vir:37 1 MKTNVKTDNKKGIVIAPINDRTFSLNEISASPAL----DYVGIGFDENYNCYLPPVNRHAL---AKLPHQNAQHG----- 68 (345) T ss_pred CCCCccccchhhcccCcceeEEeecCCcccccch----hhhhhhhcCCccccCCCCCHHHH---HHHhhcccccc----- Confidence 4443333333222222222222322221111111 122222 1222222222 22111111110 Q ss_pred CceeeecchHHHHHhhccCccCCHHHHHHHHHHHHHHcCCeeEEeeeCCCCceeeeeeeCCcceEEEeccCcceEEEEee Q lcl|Aclame:pro 76 DTETEEHDTGYAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQKNKSGTPEKLMPMHPSRVAIKRNSRTGRYEYYFQ 155 (518) Q Consensus 76 ~~~~~~~~~~~~~l~~~PN~~~t~~~f~~~~~~~~ll~G~~~~~i~~~~~G~~~~l~~l~p~~v~~~~~~~~~~~~~~~~ 155 (518) .....+...+ ...-+||+.||+++|++ ++.+++++||+|++++++..|++++|+|++|.+|++..+.+.....+.+ T Consensus 69 -~~i~~k~n~l-~~~~~Pn~~lt~~~f~~-~~~d~ll~Gnay~~~~rn~~G~~~~L~pl~~~~vr~~~d~~~~~~~~~~- 144 (345) T protein:vir:37 69 -GILHSRANMV-SSLYEGGKALSRMDMRA-LCLNLIQFGDVGLLKVRNGFGQVVRLVPLSSLYLRVRKDGGYSYLMKKS- 144 (345) T ss_pred -cceeeechHH-HhhccCCCCCCHHHHHH-HHHHHHhcCCeEEEEEEcCCCcEEEEEEEcCceeEEEEeCCeeEEEEEe- Confidence 0001111222 23448999999999986 5679999999999999999999999999999999988765443222211 Q ss_pred ccCCCCceeEEEeeeeeEEeecCCCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHccCCcceeeeeC-CcCCHHHHHH Q lcl|Aclame:pro 156 AGAGVGTQLVSFADDEVVPIRFFNPDGLERGLSLMESLKSTIFSEDSSRNATAAMWKNAGRPNLVLRHE-KRLSPEAQQR 234 (518) Q Consensus 156 ~~~~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~p~gil~~~-~~~~~e~~~~ 234 (518) ....++..+.|++++|||++.+++.+..||+|++..+..++....+++.|++++|+||++|++||.++ ..+++++.++ T Consensus 145 -~~~~~g~~~~~~~~dVihir~~~~~~~~~Gls~~~~a~~si~l~~~a~~~~~~~f~NG~~p~~Il~~~d~~l~~e~~~~ 223 (345) T protein:vir:37 145 -LYDTAQEIYRYDAKDIIFIKLYDPMQQVYGSPDYVGGIQSALLNSDATVFRRRYFSNGAHMGFILYSTDPDLTEEMEEE 223 (345) T ss_pred -EecCCceEEEEccccEEEecCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEecCCCCCHHHHHH Confidence 12334667889999999999999888899999999999999999999999999999999999999886 5789999999 Q ss_pred HHHHHHHHhcCccccccceec-----cCCcccccccCChhhHHHHHHHHHHHHHHHHHhccchHhhcccc--ccccccHH Q lcl|Aclame:pro 235 LREQFDRAHAGSSNTGKTMVV-----EEGMEPIPLQLTAVEMQFIEARQLNREEVCGVYDIAPPIVHILD--RATFSNIS 307 (518) Q Consensus 235 ~~~~~~~~~~g~~n~g~~~vl-----~~g~~~~~~~~~~~d~q~~e~~~~~~~~Ia~~fgVpp~~lg~~~--~~~~s~~e 307 (518) ++++|++ +.|..|.++++++ ++|+++++++.+++|+||+|.+++++++||++|||||.++|+.+ +++++++| T Consensus 224 lk~~~~~-~~g~~n~~~~~i~~p~g~~~G~~~~pls~~~~d~qf~e~k~~~~~dIa~a~~VPp~llGi~~~~~~~~~~~e 302 (345) T protein:vir:37 224 IARKISE-SKGVGNFRSMFVNIANGHPDGLKVIPIGDTGTKDEFANIKNISAQDVLTAHRFPAGLSGIIPTNTGGLGDPL 302 (345) T ss_pred HHHHHHH-hcCcccccceEEEcCCCcccceEEEEccCChhHHHHHHHHHHhHHHHHHHhCCCHHHhCccCCCCCCcccHH Confidence 9999988 4777888888887 57999999999999999999999999999999999999999854 46789999 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhcchhhccceeeechhhhhc Q lcl|Aclame:pro 308 AQMRAFYRDTMAIPIARIQSAMDKYVGQYWVRKNRMKFDIDDVIQ 352 (518) Q Consensus 308 ~~~~~~~~~~l~P~~~~ie~~ln~~l~~~~~~~~~~~fd~~~l~~ 352 (518) ++.+.|++++|.|++.+|++++|+.+ .......++|+..+|.+ T Consensus 303 ~~~~~f~~~~l~P~~~~ie~~ln~~~--~~~~~~~i~F~~~~L~~ 345 (345) T protein:vir:37 303 KYREVYHYDEVMPLQEIIAETINQDP--EIKNLLKIKFREQNFAK 345 (345) T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhc--cCCCcceEEecchhhcC Confidence 99999999999999999999999743 34566778898777766 No 100 >protein:vir:6058 Length: 344 # NCBI annotation: gpQ # Family: family:all:196 # MgeID: mge:126 # MgeName: WPhi # Cross-refs: genbank:acc:NP_878199;genbank:gi:33438898;genbank:GeneID:1457733 Probab=100.00 E-value=1.8e-55 Score=320.71 Aligned_cols=326 Identities=15% Similarity=0.187 Sum_probs=234.0 Q ss_pred CCCCCCCCccccccccchh--hhhhhccCccCCcccCccchhhHHHHhhh-----HHHHHHHHHH--HHhhccCceEEEE Q lcl|Aclame:pro 2 LLANGQTLSAPAMAELSPQ--MQDSYYYAPAVGMQLERQFSLYGGIYKNQ-----PWVRTVIAKR--AQALARLPVKCMF 72 (518) Q Consensus 2 ~f~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~v~~~v~~i--a~~ia~lp~~v~~ 72 (518) |+.+++....+........ -...|.......+...++...+.+.+..- |+-+..+-.+ ++...+.++++++ T Consensus 1 m~~~~~~~~~~~~~~~~~~~~~~~~~~f~~p~~v~~~~~~~~~~~~~~~~~~~~pp~~~~~la~~~~a~~~h~~~i~~k~ 80 (344) T protein:vir:60 1 MSKKKGKTLQPAAKKMTASAPKMEAFTFGEPVPVLDRRDILDYVECISNGRWYEPPISFTGLAKSLRAAVHHSSPIYVKR 80 (344) T ss_pred CCcccCCCCCchHHhhcCCcCcEEEEEcCCceeecCCcchhHHHHhhhcCccccCCCCHHHHHHHHHhhhhhccchhhhh Confidence 6666554433321111110 01112111111111111111222222221 1111111111 1111111222110 Q ss_pred ecCCceeeecchHHHHHhhccCccCCHHHHHHHHHHHHHHcCCeeEEeeeCCCCceeeeeeeCCcceEEEeccCcceEEE Q lcl|Aclame:pro 73 TSGDTETEEHDTGYAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQKNKSGTPEKLMPMHPSRVAIKRNSRTGRYEY 152 (518) Q Consensus 73 ~~~~~~~~~~~~~~~~l~~~PN~~~t~~~f~~~~~~~~ll~G~~~~~i~~~~~G~~~~l~~l~p~~v~~~~~~~~~~~~~ 152 (518) . .....-+||++||+.+| +.++.+++++||+|++++++..|++++|+|++|.+|++..+.+. +| T Consensus 81 -----------n-~l~~~~~Pn~~~t~~~f-~~~~~d~ll~Gnay~~i~rn~~G~~~~L~~l~~~~vr~~~~~~~---~~ 144 (344) T protein:vir:60 81 -----------N-ILASTFIPHPWLSQQDF-SRFVLDFLVFGNAFLEKRYSTTGKVIRLETSPAKYTRRGVEEDV---YW 144 (344) T ss_pred -----------h-HHHhhccCCCCCCHHHH-HHHHHHHHhcCCeEEEEEECCCCcEEEEEEcCcceEEEeecCCe---EE Confidence 0 11123489999999999 57889999999999999999999999999999999998876542 33 Q ss_pred EeeccCCCCceeEEEeeeeeEEeecCCCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHccCCcceeeeeC-CcCCHHH Q lcl|Aclame:pro 153 YFQAGAGVGTQLVSFADDEVVPIRFFNPDGLERGLSLMESLKSTIFSEDSSRNATAAMWKNAGRPNLVLRHE-KRLSPEA 231 (518) Q Consensus 153 ~~~~~~~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~p~gil~~~-~~~~~e~ 231 (518) .+. .++..+.|++++|||++.+++.+.+||+||+..+..++....+++.|+.++|+||++|++||+++ ..+++++ T Consensus 145 ~v~----~~~~~~~~~~~eIiHir~~~~~~~~yGlsp~~~a~~si~l~~~a~~~~~~~f~NG~~pg~il~~~~~~ls~e~ 220 (344) T protein:vir:60 145 WVP----SFNEPTAFAPGSVFHLLEPDINQELYGLPEYLSALNSAWLNESATLFRRKYYENGAHAGYIMYVTDAVQDRND 220 (344) T ss_pred EEc----cCCeEEEEcCccEEEEcCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEecCcCCCHHH Confidence 332 24566889999999999999888899999999999999999999999999999999999999886 4699999 Q ss_pred HHHHHHHHHHHhcCccccccceec------cCCcccccccCChhhHHHHHHHHHHHHHHHHHhccchHhhccccc--ccc Q lcl|Aclame:pro 232 QQRLREQFDRAHAGSSNTGKTMVV------EEGMEPIPLQLTAVEMQFIEARQLNREEVCGVYDIAPPIVHILDR--ATF 303 (518) Q Consensus 232 ~~~~~~~~~~~~~g~~n~g~~~vl------~~g~~~~~~~~~~~d~q~~e~~~~~~~~Ia~~fgVpp~~lg~~~~--~~~ 303 (518) +++++++|++.+ |. ++++.+++ ++|++|++++.++.|+||+|.+++++++||++|||||.++|+.++ +++ T Consensus 221 ~~~ik~~~~~~~-g~-~~~r~~~l~~p~g~~~g~~~~pis~~~~d~qf~e~k~~~~~eIa~af~VPp~llGi~~~~t~~~ 298 (344) T protein:vir:60 221 IEMLRENMVKSK-GR-NNFKNLFLYAPQGKADGIKIIPLSEVATKDDFFNIKKASAADLLDAHRIPFQLMGGKPENVGSL 298 (344) T ss_pred HHHHHHHHHHhc-CC-CCCcceEEecCCCCccceeEEEcCCChhHHHHHHHHHhhHHHHHHHhCCCHHHhcccCCCCCcc Confidence 999999999976 43 56777777 479999999999999999999999999999999999999998654 458 Q ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHhhhcchhhccceeeechhhhhccCH Q lcl|Aclame:pro 304 SNISAQMRAFYRDTMAIPIARIQSAMDKYVGQYWVRKNRMKFDIDDVIQPDW 355 (518) Q Consensus 304 s~~e~~~~~~~~~~l~P~~~~ie~~ln~~l~~~~~~~~~~~fd~~~l~~~d~ 355 (518) +|+|++.+.|++++|.|++++|| +||.+|..+ .++|+...+...|. T Consensus 299 ~n~e~~~~~f~~~~L~Pl~~~~e-~ln~~lg~~-----~i~F~~~~l~~~d~ 344 (344) T protein:vir:60 299 GDIEKVAKVFVRNELIPLQDRIR-EINGWLGQE-----VIRFKNYSLDTDNG 344 (344) T ss_pred ccHHHHHHHHHHHHHHHHHHHHH-HHHHhcCCc-----ccccCccccCCCCC Confidence 99999999999999999999998 588888532 24566556655554 No 101 >protein:vir:5691 Length: 344 # NCBI annotation: gpQ # Family: family:all:196 # MgeID: mge:120 # MgeName: L-413C # Cross-refs: genbank:acc:NP_839850;genbank:gi:30065705;genbank:GeneID:1260599 Probab=100.00 E-value=1.4e-55 Score=321.26 Aligned_cols=325 Identities=14% Similarity=0.191 Sum_probs=232.6 Q ss_pred CCCCCC-Cccccccccch--hhhhhhccCccCCcccCccchhhHHHHhhh-----HHHHHHHHHHH--HhhccCceEEEE Q lcl|Aclame:pro 3 LANGQT-LSAPAMAELSP--QMQDSYYYAPAVGMQLERQFSLYGGIYKNQ-----PWVRTVIAKRA--QALARLPVKCMF 72 (518) Q Consensus 3 f~~~~~-~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~v~~~v~~ia--~~ia~lp~~v~~ 72 (518) |.+++. .+++....... .-...|.......+...++...+.+.+.+. |+=+..+..+. +..-+-+++.++ T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~~pp~~~~~la~~~~a~~~h~s~i~~k~ 80 (344) T protein:vir:56 1 MSKKKGKTPQPAAKTMTASAPKMEAFTFGEPVPVLDRRDILDYVECISNGRWYEPPVSFTGLAKSLRAAVHHSSPIYVKR 80 (344) T ss_pred CCCCCCCCCchhhHHhhcCCCceEEEEcCCceeecCcchhhhHHHhhhcCccccCCCCHHHHHHHHhhhhhhCccceehh Confidence 455443 33332111110 001222211111111111111222222221 11122221111 111111222211 Q ss_pred ecCCceeeecchHHHHHhhccCccCCHHHHHHHHHHHHHHcCCeeEEeeeCCCCceeeeeeeCCcceEEEeccCcceEEE Q lcl|Aclame:pro 73 TSGDTETEEHDTGYAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQKNKSGTPEKLMPMHPSRVAIKRNSRTGRYEY 152 (518) Q Consensus 73 ~~~~~~~~~~~~~~~~l~~~PN~~~t~~~f~~~~~~~~ll~G~~~~~i~~~~~G~~~~l~~l~p~~v~~~~~~~~~~~~~ 152 (518) . .....-+||++||..+| +.++.+++++||+|++++++..|++++|+|++|.+|++..+.+. +| T Consensus 81 -----------n-~l~~~~~Pnp~~t~~~f-~~~~~d~ll~Gnay~~~~rn~~G~~~~L~pl~~~~v~~~~~~~~---~~ 144 (344) T protein:vir:56 81 -----------N-ILASTFIPHPWLSQQDF-SRFVLDFLVFGNAFLEKRYSTTGKVIRLETSPAKYTRRGVEEDV---YW 144 (344) T ss_pred -----------h-hHHhhcCCCCCCCHHHH-HHHHHHHHhcCCeEEEEEECCCCcEEEEEEeCCceeEEeecCCE---EE Confidence 1 11123489999999999 67789999999999999999999999999999999998775542 33 Q ss_pred EeeccCCCCceeEEEeeeeeEEeecCCCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHccCCcceeeeeCC-cCCHHH Q lcl|Aclame:pro 153 YFQAGAGVGTQLVSFADDEVVPIRFFNPDGLERGLSLMESLKSTIFSEDSSRNATAAMWKNAGRPNLVLRHEK-RLSPEA 231 (518) Q Consensus 153 ~~~~~~~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~p~gil~~~~-~~~~e~ 231 (518) ++. .++..+.|++++||||+.+++.+.+||+||+..+..++....+++.|..++|+||++|++||++++ .+++++ T Consensus 145 ~~~----~~g~~~~~~~~dIiHir~~~~~~~~~Gls~~~~a~~si~l~~~a~~~~~~~f~NGa~pg~Il~~~d~~ls~e~ 220 (344) T protein:vir:56 145 WVP----SFNEPTAFAPGSVFHLLEPDINQELYGLPEYLSALNSAWLNESATLFRRKYYENGAHAGYIMYVTDAVQDRND 220 (344) T ss_pred EEe----cCCeEEEEcCccEEEECCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEecCCCCCHHH Confidence 332 245678899999999999998888999999999999999999999999999999999999998865 699999 Q ss_pred HHHHHHHHHHHhcCccccccceec------cCCcccccccCChhhHHHHHHHHHHHHHHHHHhccchHhhccccc--ccc Q lcl|Aclame:pro 232 QQRLREQFDRAHAGSSNTGKTMVV------EEGMEPIPLQLTAVEMQFIEARQLNREEVCGVYDIAPPIVHILDR--ATF 303 (518) Q Consensus 232 ~~~~~~~~~~~~~g~~n~g~~~vl------~~g~~~~~~~~~~~d~q~~e~~~~~~~~Ia~~fgVpp~~lg~~~~--~~~ 303 (518) .++++++|++.. | .|+|+++++ ++|+++++++.++.|+||+|.+++++++||++|||||.++|+.++ +++ T Consensus 221 ~~~lk~~~~~~~-g-~~~~r~l~l~~p~g~~~G~~~~pis~~~~d~qf~e~k~~s~~eIa~afrVPp~llGi~~~~t~~~ 298 (344) T protein:vir:56 221 IEMLRENMVKSK-G-RNNFKNLFLYAPQGKADGIKIIPLSEVATKDDFFNIKKASAADLLDAHRIPFQLMGGKPENVGSL 298 (344) T ss_pred HHHHHHHHHHhc-C-CCCccceEEecCCCCccceeEEEcCCChHHHHHHHHHHhhHHHHHHHhCCCHHHhccCCCCCCcc Confidence 999999999865 4 367898888 579999999999999999999999999999999999999998654 568 Q ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHhhhcchhhccceeeechhhhhccCH Q lcl|Aclame:pro 304 SNISAQMRAFYRDTMAIPIARIQSAMDKYVGQYWVRKNRMKFDIDDVIQPDW 355 (518) Q Consensus 304 s~~e~~~~~~~~~~l~P~~~~ie~~ln~~l~~~~~~~~~~~fd~~~l~~~d~ 355 (518) +|+|++.+.|++++|.||+++|| ++|.+|..+. ++|+.-.+...|- T Consensus 299 ~n~eq~~~~f~~~tL~Pl~~~ie-~~n~~l~~~~-----~~F~~y~l~~~~~ 344 (344) T protein:vir:56 299 GDIEKVAKVFVRNELIPLQDRIR-EINGWIGQEV-----IRFKNYSLDTDNG 344 (344) T ss_pred ccHHHHHHHHHHHHHHHHHHHHH-HHHhhhcccc-----ccCCCccccccCC Confidence 99999999999999999999998 5888886433 3454444443343 No 102 >protein:vir:2013 Length: 344 # NCBI annotation: gpQ # Family: family:all:196 # MgeID: mge:315 # MgeName: P2 # Cross-refs: genbank:acc:NP_046757;genbank:gi:9630328;genbank:GeneID:1261529 Probab=100.00 E-value=5.2e-55 Score=318.17 Aligned_cols=324 Identities=15% Similarity=0.207 Sum_probs=232.5 Q ss_pred CCCCCCCc-ccccccc---chhhhhhhccCccCCcccCccchhhHHHHhhh-----HHHHHHHHHH--HHhhccCceEEE Q lcl|Aclame:pro 3 LANGQTLS-APAMAEL---SPQMQDSYYYAPAVGMQLERQFSLYGGIYKNQ-----PWVRTVIAKR--AQALARLPVKCM 71 (518) Q Consensus 3 f~~~~~~~-~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~v~~~v~~i--a~~ia~lp~~v~ 71 (518) |+|+...+ ++..... .+.+ ..|.......+...++...+.+.+.+. |+=+..+..+ |+..-+.+++++ T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~f~~p~~v~~~~~~~~~~~~~~~~~~~~pp~~~~~la~~~~a~~~h~~~i~~k 79 (344) T protein:vir:20 1 MSKKKGKTPQPAAKTMTASGPKM-EAFTFGEPVPVLDRRDILDYVECISNGRWYEPPVSFTGLAKSLRAAVHHSSPIYVK 79 (344) T ss_pred CCcccCCCCcchhhhhhccCCce-EEEEcCCceEecCcchhhhhhhhhhcCceecCCCCHHHHHHHHhhhhhhCccceeh Confidence 55544332 2221111 1111 112111111111111111122222111 1111111111 111112222221 Q ss_pred EecCCceeeecchHHHHHhhccCccCCHHHHHHHHHHHHHHcCCeeEEeeeCCCCceeeeeeeCCcceEEEeccCcceEE Q lcl|Aclame:pro 72 FTSGDTETEEHDTGYAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQKNKSGTPEKLMPMHPSRVAIKRNSRTGRYE 151 (518) Q Consensus 72 ~~~~~~~~~~~~~~~~~l~~~PN~~~t~~~f~~~~~~~~ll~G~~~~~i~~~~~G~~~~l~~l~p~~v~~~~~~~~~~~~ 151 (518) + . .....-+||+.||..+| +.++.+++++||+|++++++..|++++|+|+++.+|++..+.+. + T Consensus 80 ~-----------n-~l~~~~~Pn~~lt~~~f-~~~~~d~ll~Gnay~~i~rn~~G~~~~L~pl~~~~vr~~~~~~~---~ 143 (344) T protein:vir:20 80 R-----------N-ILASTFIPHPWLSQQDF-SRFVLDFLVFGNAFLEKRYSTTGKVIRLETSPAKYTRRGVEEDV---Y 143 (344) T ss_pred h-----------h-hHHHhccCCCCCCHHHH-HHHHHHHHhcCCeEEEEEECCCCcEEEEEEcCCceeEeeecCCE---E Confidence 1 1 11123489999999999 57889999999999999999999999999999999998765432 3 Q ss_pred EEeeccCCCCceeEEEeeeeeEEeecCCCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHccCCcceeeeeC-CcCCHH Q lcl|Aclame:pro 152 YYFQAGAGVGTQLVSFADDEVVPIRFFNPDGLERGLSLMESLKSTIFSEDSSRNATAAMWKNAGRPNLVLRHE-KRLSPE 230 (518) Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~p~gil~~~-~~~~~e 230 (518) |.+. .++..+.|++++|||++.+++.+.+||+||+..+..++....+++.|+.++|+||++|++||.++ ..++++ T Consensus 144 ~~~~----~~~~~~~~~~~eIiHir~~~~~~~~yGls~~~~a~~si~l~~~a~~~~~~~f~NGa~p~~Il~~~d~~l~~e 219 (344) T protein:vir:20 144 WWVP----SFNEPTAFAPGSVFHLLEPDINQELYGLPEYLSALNSAWLNESATLFRRKYYENGAHAGYIMYVTDAVQDRN 219 (344) T ss_pred EEEc----cCCeEEEEcCccEEEeCCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEecCcCCCHH Confidence 3332 24567889999999999999888899999999999999999999999999999999999999876 569999 Q ss_pred HHHHHHHHHHHHhcCccccccceec------cCCcccccccCChhhHHHHHHHHHHHHHHHHHhccchHhhccccc--cc Q lcl|Aclame:pro 231 AQQRLREQFDRAHAGSSNTGKTMVV------EEGMEPIPLQLTAVEMQFIEARQLNREEVCGVYDIAPPIVHILDR--AT 302 (518) Q Consensus 231 ~~~~~~~~~~~~~~g~~n~g~~~vl------~~g~~~~~~~~~~~d~q~~e~~~~~~~~Ia~~fgVpp~~lg~~~~--~~ 302 (518) +.++++++|++.+ |. ++|+.+++ ++|++|++++.++.|+||+|.+++++++||++|||||.++|+.++ ++ T Consensus 220 ~~~~ik~~~~~~~-g~-~n~r~l~l~~p~g~~~gi~~~pis~~~~d~qf~e~k~~s~~eIa~af~VPp~llGi~~~~t~~ 297 (344) T protein:vir:20 220 DIEMLRENMVKSK-GR-NNFKNLFLYAPQGKADGIKIIPLSEVATKDDFFNIKKASAADLLDAHRIPFQLMGGKPENVGS 297 (344) T ss_pred HHHHHHHHHHHhc-CC-CCccceEEecCCCCccceeEEEcCCChhHHHHHHHHHhhHHHHHHHhCCCHHHhccCCCCCCc Confidence 9999999999965 33 56887777 469999999999999999999999999999999999999998654 56 Q ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHhhhcchhhccceeeechhhhhccCH Q lcl|Aclame:pro 303 FSNISAQMRAFYRDTMAIPIARIQSAMDKYVGQYWVRKNRMKFDIDDVIQPDW 355 (518) Q Consensus 303 ~s~~e~~~~~~~~~~l~P~~~~ie~~ln~~l~~~~~~~~~~~fd~~~l~~~d~ 355 (518) ++|+|++.+.|++++|.|++++|| +||.+|... .++|+...+...|. T Consensus 298 ~~n~e~~~~~f~~~~l~P~~~~~e-~in~~lg~~-----~i~F~~~~l~~~d~ 344 (344) T protein:vir:20 298 LGDIEKVAKVFVRNELIPLQDRIR-EINGWLGQE-----VIRFKNYSLDTDND 344 (344) T ss_pred cccHHHHHHHHHHHHHHHHHHHHH-HHHHhcCCc-----ccccCccccccCCC Confidence 899999999999999999999998 588887543 25676666655555 No 103 >protein:vir:78749 Length: 337 # NCBI annotation: putative portal protein # Family: family:all:196 # MgeID: mge:1857 # MgeName: phiO18P # Cross-refs: genbank:acc:YP_001285643;genbank:gi:148727149;genbank:GeneID:5220095 Probab=100.00 E-value=1.3e-54 Score=315.97 Aligned_cols=321 Identities=13% Similarity=0.169 Sum_probs=239.4 Q ss_pred CCCCCCCccccccccchhhhhhhccCccCCcccCccchhhHHHHhhhHHHHHHHHHHHHhhc---cCceEEEEecCCcee Q lcl|Aclame:pro 3 LANGQTLSAPAMAELSPQMQDSYYYAPAVGMQLERQFSLYGGIYKNQPWVRTVIAKRAQALA---RLPVKCMFTSGDTET 79 (518) Q Consensus 3 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~v~~ia~~ia---~lp~~v~~~~~~~~~ 79 (518) |++.+..+... ...++.-...|+... ++. ....+..|+.+.-+... .-|+....-. +-.. T Consensus 1 m~~~~~~~~~~-~~~~~~~~~~~~~p~----~~~-----------~~~~~~~~~~~~~~~~~~~~~pP~~~~~La-~l~~ 63 (337) T protein:vir:78 1 MTKRQQQPAQA-AASSPRPSVVFSMPE----AID-----------PTAWMTDYTGVFYNPYGEYYQPPIDRKGLA-KVAR 63 (337) T ss_pred CCCcccCcccc-cccCceeEEEecCcc----ccc-----------CcchhHhhhhhhhccCcceecCCCCHHHHH-HHhh Confidence 66655544322 222222112222211 111 11223334444333222 2232211000 0000 Q ss_pred eecchHHHHHhhccCccCCHH----HHHHHHHHHHHHcCCeeEEeeeCCCCceeeeeeeCCcceEEEeccCcceEEEEee Q lcl|Aclame:pro 80 EEHDTGYAKLLADPCEYLDPF----AFWEWVASTLDIYGETYLAIQKNKSGTPEKLMPMHPSRVAIKRNSRTGRYEYYFQ 155 (518) Q Consensus 80 ~~~~~~~~~l~~~PN~~~t~~----~f~~~~~~~~ll~G~~~~~i~~~~~G~~~~l~~l~p~~v~~~~~~~~~~~~~~~~ 155 (518) ...+| ...|..+||+.++.+ ++++.++.|++++||+|++++|+..|++++|+|++|.+|++..+. ..+|.+ T Consensus 64 ~~~~h-~~~L~~k~N~~~~~f~~~~~~~~~~~~d~ll~GNay~~~~rn~~G~~~~L~pl~~~~v~~~~d~---~~~~~~- 138 (337) T protein:vir:78 64 ANAHH-GAILMARRNMVAGRFTNQRATITAFVHNYLQFGDGGLLKLRNSFGQVVGLHPLSSVYLRRREDG---CFVYLQ- 138 (337) T ss_pred cchhh-hhHHHhhhccccccCcCcHHHHHHHHHHHHhhCCeEEEEEECCCCcEEEEEEeCCceeEeeeCC---eEEEEE- Confidence 01111 234667999876654 688999999999999999999999999999999999999887643 223322 Q ss_pred ccCCCCceeEEEeeeeeEEeecCCCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHccCCcceeeeeCC-cCCHHHHHH Q lcl|Aclame:pro 156 AGAGVGTQLVSFADDEVVPIRFFNPDGLERGLSLMESLKSTIFSEDSSRNATAAMWKNAGRPNLVLRHEK-RLSPEAQQR 234 (518) Q Consensus 156 ~~~~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~p~gil~~~~-~~~~e~~~~ 234 (518) .++..+.|++++|||+|.+++.+.+||+|++..+..++....+++.+++++|+||++|++||..++ .+++++.++ T Consensus 139 ----~~~~~~~~~~~eIiHik~~~~~~~~~Gls~~~~a~~si~l~~aa~~~~~~~f~NGa~p~~il~~~~~~l~~e~~~~ 214 (337) T protein:vir:78 139 ----QGKPNLIYRPDDVIWLAQYDPEQQVYGMPDYLGGLQSALLNQDATLFRRRYFLNGAHMGFIFYATDPNMDDDTEEE 214 (337) T ss_pred ----cCCceEEECCccEEEECCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhccCCCceeEEcCCCCCCHHHHHH Confidence 134567899999999999998888999999999999999999999999999999999999998775 699999999 Q ss_pred HHHHHHHHhcCccccccceec-----cCCcccccccCChhhHHHHHHHHHHHHHHHHHhccchHhhcccc---ccccccH Q lcl|Aclame:pro 235 LREQFDRAHAGSSNTGKTMVV-----EEGMEPIPLQLTAVEMQFIEARQLNREEVCGVYDIAPPIVHILD---RATFSNI 306 (518) Q Consensus 235 ~~~~~~~~~~g~~n~g~~~vl-----~~g~~~~~~~~~~~d~q~~e~~~~~~~~Ia~~fgVpp~~lg~~~---~~~~s~~ 306 (518) +++.|++ +.|.+|.++++++ ++|++|++++.++.|+||+|.+++++++||++|||||.++|+.. .++++|+ T Consensus 215 lk~~~~~-~~G~~n~~~~~v~~~~g~~~Gi~~~pis~~~~d~qfle~k~~s~~eIa~a~~VPp~llGi~~~~~~~~~~n~ 293 (337) T protein:vir:78 215 MKEMIAN-SKGVGNFRSMFVNIPDGKPDGIKLIPVGDIATKDEFAAIKGITAQDVLTAHRYPPALAGIIPTNGGGGLGDP 293 (337) T ss_pred HHHHHHH-hcCcccccceEEEcCCCCccceeEEEcCCChhHHHHHHHHHHhHHHHHHHhCCCHHHcccccCCCcCccccH Confidence 9999986 6788899998887 67899999999999999999999999999999999999999754 4578899 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhcchhhccceeeechhhhh Q lcl|Aclame:pro 307 SAQMRAFYRDTMAIPIARIQSAMDKYVGQYWVRKNRMKFDIDDVI 351 (518) Q Consensus 307 e~~~~~~~~~~l~P~~~~ie~~ln~~l~~~~~~~~~~~fd~~~l~ 351 (518) |++.+.|++++|.|++++||+++|.+|++.. +...|+++...++ T Consensus 294 e~~~~~f~~~~L~P~~~~ie~~~n~~ll~~~-~~~~f~~~~~~~~ 337 (337) T protein:vir:78 294 EKYDATYARNEVLPLCELVQDAINSAGLPRA-LWVTFRETIGAAV 337 (337) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhcCChh-hceeccccccccC Confidence 9999999999999999999999999888643 3334566666666 No 104 >protein:vir:4698 Length: 251 # NCBI annotation: hypothetical protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:102 # MgeName: phiPV83 # Cross-refs: genbank:acc:NP_061630;genbank:gi:9635717;genbank:GeneID:1262980 Probab=100.00 E-value=2.2e-50 Score=292.81 Aligned_cols=248 Identities=19% Similarity=0.236 Sum_probs=196.3 Q ss_pred CCCCCCCCCc--cccccccchhhhhhhccCccCCcccCccchhhHHHHhhhHHHHHHHHHHHHhhccCceEEEEecCCce Q lcl|Aclame:pro 1 MLLANGQTLS--APAMAELSPQMQDSYYYAPAVGMQLERQFSLYGGIYKNQPWVRTVIAKRAQALARLPVKCMFTSGDTE 78 (518) Q Consensus 1 ~~f~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~v~~ia~~ia~lp~~v~~~~~~~~ 78 (518) |=|..+.... .+.......++....+..... ...+..+.++++++|++||++||++||++|++++++. . T Consensus 1 MglF~~~~~r~~~~~~~~~~~~~~~~~~~~~~~------~~~v~~~~al~~~~v~~~i~~ia~~iA~lp~~~~~~~---~ 71 (251) T protein:vir:46 1 MGIFYKNEKRDLQYNEDDLQMMVQTLPSFQGTK------LRQYKDIEAIRHSDIFTAVMMIASDLARMPIRVTVNG---Q 71 (251) T ss_pred CCccccccccccCCCccchhhhhhhhccccCcC------cceechhhhhccHHHHHHHHHHHHhHhhCceEEeeCc---c Confidence 5333332221 112222222222211111111 1234456789999999999999999999999999744 2 Q ss_pred eeecchHHHHHhhccCccCCHHHHHHHHHHHHHHcCCeeEEeeeCCCCceeeeeeeCCcceEEEeccCcceEEEEeeccC Q lcl|Aclame:pro 79 TEEHDTGYAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQKNKSGTPEKLMPMHPSRVAIKRNSRTGRYEYYFQAGA 158 (518) Q Consensus 79 ~~~~~~~~~~l~~~PN~~~t~~~f~~~~~~~~ll~G~~~~~i~~~~~G~~~~l~~l~p~~v~~~~~~~~~~~~~~~~~~~ 158 (518) ...+|+.+.+|+.+||++||+++||+.++.+++++||+|++++|+.+|++++|+|++|.+|++..+.++...++.+.... T Consensus 72 ~~~~~~~~~ll~~~Pn~~~t~~~f~~~l~~~lll~Gnay~~i~r~~~G~~~~L~~i~~~~v~v~~~~~g~~~~~~~~~~~ 151 (251) T protein:vir:46 72 INYSDRIVNLLNTRPNPMYNGYIFKLVVFVSALLTSHGYIEITRDKTGEPMNLTFRKTSEIELKSDARGRLYYFHQRIDS 151 (251) T ss_pred ccccchHHHHHhccCCCCCCHHHHHHHHHHHHhhcCCeEEEEEECCCCcEEEEEEECCceEEEEECCCCcEEEEEEEecc Confidence 44567777788899999999999999999999999999999999999999999999999999999877665554444444 Q ss_pred CCCceeEEEeeeeeEEeecCCCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHccCCcceeeeeCCcCC-HHHHHHHHH Q lcl|Aclame:pro 159 GVGTQLVSFADDEVVPIRFFNPDGLERGLSLMESLKSTIFSEDSSRNATAAMWKNAGRPNLVLRHEKRLS-PEAQQRLRE 237 (518) Q Consensus 159 ~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~p~gil~~~~~~~-~e~~~~~~~ 237 (518) ...+..+.|++++|||||+++.++ .+|+||+..+..+|..+.+++++..++|+||++|+|+|++++.++ +++.+++++ T Consensus 152 ~~~g~~~~~~~~diiH~r~~~~dg-~~G~spi~~~~~~i~~~~~~~~~~~~~f~ng~~p~gil~~~~~l~~~e~~~~~~~ 230 (251) T protein:vir:46 152 NGNNIERNVKFEDMLDIKFYSLDG-INGLSLLDTLSRTIESDNNGKDFLNNFLRNGTHAGGILKMKGVLDNKKARDRARE 230 (251) T ss_pred CCcceeEEECCccEEEecCcCCCC-eeecCHHHHHHHHHHHHHHHHHHHHHHHHccCCCcEEEEeCCCCCCHHHHHHHHH Confidence 455677899999999999988765 689999999999999999999999999999999999999998874 567899999 Q ss_pred HHHHHhcCccccccceeccCCccc Q lcl|Aclame:pro 238 QFDRAHAGSSNTGKTMVVEEGMEP 261 (518) Q Consensus 238 ~~~~~~~g~~n~g~~~vl~~g~~~ 261 (518) .|++.++|.+|+|++++ ||+- T Consensus 231 ~~~~~~~g~~n~g~~~~---gm~~ 251 (251) T protein:vir:46 231 EFPKVLVELNKLGKLSY---SMNQ 251 (251) T ss_pred HHHHHhcCccccccccc---ccCC Confidence 99999999999999776 4333 No 105 >protein:vir:98853 Length: 219 # NCBI annotation: hypothetical protein # Family: family:all:196 # MgeID: mge:1495 # MgeName: F108 # Cross-refs: genbank:acc:YP_654729;genbank:gi:109302914;genbank:GeneID:4156058 Probab=100.00 E-value=1.9e-45 Score=265.80 Aligned_cols=210 Identities=13% Similarity=0.249 Sum_probs=173.0 Q ss_pred eEEEeccCcceEEEEeeccC-CCCceeEEEeeeeeEEeecCCCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHccCCc Q lcl|Aclame:pro 139 VAIKRNSRTGRYEYYFQAGA-GVGTQLVSFADDEVVPIRFFNPDGLERGLSLMESLKSTIFSEDSSRNATAAMWKNAGRP 217 (518) Q Consensus 139 v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~p 217 (518) |++..+ +.+.|.+.... ..++..+++++++|||||.+++.+.+||+||+..++.++....++++|+.+||+||++| T Consensus 1 ~r~~~d---g~~~y~~~~~~~~~~g~~~~~~~~eilH~r~~~~~~~~~Glspi~~a~~~i~~~~aa~~~~~~~f~Ng~~p 77 (219) T protein:vir:98 1 MRVCKD---GNYKYLMKKSLYDTKSEIYEYNKNDVIFIKLYDPMQQVYGSPDYVGGITSALLNSDATIFRRRYYSNGAHM 77 (219) T ss_pred Cceeec---CeEEEEEecceecCCceeEEeccccEEEecCCCCCCCcceecHHHHHHHHHHHHHHHHHHHHHHHhcCCCC Confidence 333332 33444443322 23456788999999999999987888999999999999999999999999999999999 Q ss_pred ceeeeeCC-cCCHHHHHHHHHHHHHHhcCccccccceec-----cCCcccccccCChhhHHHHHHHHHHHHHHHHHhccc Q lcl|Aclame:pro 218 NLVLRHEK-RLSPEAQQRLREQFDRAHAGSSNTGKTMVV-----EEGMEPIPLQLTAVEMQFIEARQLNREEVCGVYDIA 291 (518) Q Consensus 218 ~gil~~~~-~~~~e~~~~~~~~~~~~~~g~~n~g~~~vl-----~~g~~~~~~~~~~~d~q~~e~~~~~~~~Ia~~fgVp 291 (518) +|||+++. .+++++++++++.|++. .|..|+++++++ ++|++|++++++++|+||+|++++++.+||++|||| T Consensus 78 ~gil~~~~~~l~~e~~~~~~~~~~~~-~g~~n~~~~~l~~~gg~~~G~~~~~~~~~~~d~qfle~rk~~~~eIa~~fgVP 156 (219) T protein:vir:98 78 GFILYSTDPDMTEEMEDEIAERIRDS-KGVGNFRSMFVNIAGGHPDGLKVIPIGDTGQKDEFANIKNISAQDVLTSHRFP 156 (219) T ss_pred ceEEEeCCCCCCHHHHHHHHHHHHHh-cCcccccceeEecCCCCccceeEEEccCCHHHHHHHHHHHhhHHHHHHHhCCC Confidence 99998875 69999999999999885 677787777666 578999999999999999999999999999999999 Q ss_pred hHhhccc--cccccccHHHHHHHHHHHHHHHHHHHHHHHHHhhhcchhhccceeeechhhhhccC Q lcl|Aclame:pro 292 PPIVHIL--DRATFSNISAQMRAFYRDTMAIPIARIQSAMDKYVGQYWVRKNRMKFDIDDVIQPD 354 (518) Q Consensus 292 p~~lg~~--~~~~~s~~e~~~~~~~~~~l~P~~~~ie~~ln~~l~~~~~~~~~~~fd~~~l~~~d 354 (518) |+++|+. ++++++|+|++.+.|+++||.||+++||++||++++.. ....++|+-..+.-.+ T Consensus 157 p~~lG~~~~~~~~~sn~eq~~~~f~~~tL~P~~~~ie~~ln~~~~~~--~~~~~~F~~~~~~d~~ 219 (219) T protein:vir:98 157 PGLSGIIPVNTAGLGDPLKIREAYQADEVLPLQEIIAESINSDYEIK--SALKVNFKQPEKRDKN 219 (219) T ss_pred HHHcccccCCCCCccCHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCC--CccEEeecCcccccCC Confidence 9999975 35679999999999999999999999999999875432 2345666643333222 No 106 >protein:vir:5249 Length: 437 # NCBI annotation: hypothetical protein # Family: family:all:297 # MgeID: mge:117 # MgeName: Aaphi23 # Cross-refs: genbank:acc:NP_852754;genbank:gi:31544029;interpro:IPR006445;uniprot:Q7Y5U6;genbank:GeneID:2753529 Probab=99.94 E-value=2.5e-27 Score=166.47 Aligned_cols=392 Identities=11% Similarity=0.069 Sum_probs=225.6 Q ss_pred CCCCCCCCCccccccccchhhhhhhccCccCCcccCccchhhHHHHhhhHHHHHHHHHHHHhhccCceEEEEecCCceee Q lcl|Aclame:pro 1 MLLANGQTLSAPAMAELSPQMQDSYYYAPAVGMQLERQFSLYGGIYKNQPWVRTVIAKRAQALARLPVKCMFTSGDTETE 80 (518) Q Consensus 1 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~v~~ia~~ia~lp~~v~~~~~~~~~~ 80 (518) |-|.-+-....-..+...+.... ..+......+.....+|.+++.++++|+.+|+.+.+.++.+.-.+. .. T Consensus 1 ~~~~D~~~~~~~~~g~~~~~~~~------~~~~~~~~~~~~l~a~Y~~~~l~~~~vd~~a~d~~r~~~~i~~~d~---~~ 71 (437) T protein:vir:52 1 MKFFDGIKSLALKLGSKQEQTYY------SPSLSLTDDLVQLEALWRDNWIANKVCIKRPEDMVRNWREIYSNDL---NS 71 (437) T ss_pred CchhhhhHhHHhcCCCcccccee------ecCccccccHHHHHHHHHhCchhhHHhhcchHHhhcCCceEecCCC---CH Confidence 22211111100000000000000 0122222334445578999999999999999999999999853211 11 Q ss_pred ecchHHHHHhhccCccCCHHHHHHHHHHHHHHcCCeeEEeeeCCC---------CceeeeeeeCCcceEEEecc------ Q lcl|Aclame:pro 81 EHDTGYAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQKNKS---------GTPEKLMPMHPSRVAIKRNS------ 145 (518) Q Consensus 81 ~~~~~~~~l~~~PN~~~t~~~f~~~~~~~~ll~G~~~~~i~~~~~---------G~~~~l~~l~p~~v~~~~~~------ 145 (518) .....+...+++-+ ..+-+...+.+.-++|.++++++.+.. |.+..+.++++..|++.... T Consensus 72 ~~~~~~~~~~~~l~----~~~~l~~a~~~~rl~G~a~i~i~~d~~~~~~pl~~~~~~~~~~v~~~~~v~~~~~~~~dp~s 147 (437) T protein:vir:52 72 KQLDLFTKFERSLK----LRETLTKALQWSSLYGSVGLLVVTDSQNTSAPLKPTERLKRLIILPKWKISPTGTKDDDVLS 147 (437) T ss_pred HHHHHHHHHHHhhc----HHHHHHHHHHhcccccceEEEEEecCCCcccccccCCceeEEEEechhhccccccccccccc Confidence 11122333333333 233333344455579999999988653 67888999999888743221 Q ss_pred --CcceEEEEeeccCCCCceeEEEeeeeeEEeecC---CCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHccCCccee Q lcl|Aclame:pro 146 --RTGRYEYYFQAGAGVGTQLVSFADDEVVPIRFF---NPDGLERGLSLMESLKSTIFSEDSSRNATAAMWKNAGRPNLV 220 (518) Q Consensus 146 --~~~~~~~~~~~~~~~~~~~~~~~~~~vih~~~~---~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~p~gi 220 (518) .+....|.+.. ++..+.++++.||||.+. .+.+..+|.|+++.++..|.....+.......+.+...+ + T Consensus 148 ~~fg~p~~y~v~~----~~~~~~iH~SRii~~~~~~~~~~~~~~~G~s~le~~~~~i~~~~~~~~~~~~l~~~~~~~--v 221 (437) T protein:vir:52 148 PNFGRYSEYSILG----GSQSITVHHSRLIILNANDAPLSDNDIWGVSDLEKIIDVLKRFDSASVNVGDLIFESKID--I 221 (437) T ss_pred cccCcceEEEEec----CCcceeEccceeEEecCccCCCccccccCCchHHHHHHHHHHHHHHHHHHHHHHHHcCCC--c Confidence 23444555532 334568999999999753 234567899999999999999999998888887775544 3 Q ss_pred eeeCC---cCC---HHHHHHHHHHHHHHhcCccccccceeccCCcccccccCChhhHHHHHHHHHHHHHHHHHhccchHh Q lcl|Aclame:pro 221 LRHEK---RLS---PEAQQRLREQFDRAHAGSSNTGKTMVVEEGMEPIPLQLTAVEMQFIEARQLNREEVCGVYDIAPPI 294 (518) Q Consensus 221 l~~~~---~~~---~e~~~~~~~~~~~~~~g~~n~g~~~vl~~g~~~~~~~~~~~d~q~~e~~~~~~~~Ia~~fgVpp~~ 294 (518) ++++. .++ ++...+..+.+... .+.+++++++.+.+|+.++.+..+ +.+...+....||.+++||..+ T Consensus 222 ~k~~~l~~~l~~~~~~~~~~~~~~~~~~----~~~~~~~~~d~~~~~e~~~~~~sg--l~~~l~~~~~~iaaa~~iP~t~ 295 (437) T protein:vir:52 222 FKIAGLSDKIAAGMENEVASVISAVQEI----KSATNSLLLDAENEYDRKELTFTG--LKDLLTEFRNAVAGAADMPVTI 295 (437) T ss_pred eecchHHHHhcCCcHHHHHHHHHHHHHh----cCCCceEEEcCCcceEEEecCcCC--HHHHHHHHHHHHHHHhcCchhh Confidence 34432 222 23333333333322 345788999989899888777665 4477778889999999999988 Q ss_pred hccccccccccHHHHHHHHHH-------HHHHHHHHHHHHHHHhhhcchhhccceeeechhhhhccCHHHHH-------H Q lcl|Aclame:pro 295 VHILDRATFSNISAQMRAFYR-------DTMAIPIARIQSAMDKYVGQYWVRKNRMKFDIDDVIQPDWEAKS-------E 360 (518) Q Consensus 295 lg~~~~~~~s~~e~~~~~~~~-------~~l~P~~~~ie~~ln~~l~~~~~~~~~~~fd~~~l~~~d~~~~~-------~ 360 (518) |.....+..++.++..+.|+. ..+.|+++.+-..|-...+......+. |.+.+|...+.++++ + T Consensus 296 L~G~s~~Glasge~D~~~yyd~i~~~Qe~~l~p~le~l~~~i~~~~~g~~~~~~~--~~f~pL~~~s~kekae~~~~~a~ 373 (437) T protein:vir:52 296 LFGQSVSGLASGDEDIQNYHEAIRRLQETRLRPIFEIIDPLICNELFGGLPADWW--FEFVPLTTVKQEQQINMLNTFAT 373 (437) T ss_pred hcCcCcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcce--EEeCCcCCcCHHHHHHHHHHHHH Confidence 765555566777777777776 567777777776665544433323344 445567666655544 4 Q ss_pred HHHHHHhCCCcCHHHHHHHHhC----CCCCCccCceeeecccccccccccccCCC-CCCCCCCCCcccCCCCCccC Q lcl|Aclame:pro 361 STQKMVNSGVATPNEGREIMGL----PRSDDPKADELYANSALQPLGATPDGAVE-GEEAPAPKRPASTPVASLDQ 431 (518) Q Consensus 361 ~~~~~~~~g~~T~NE~R~~~g~----~pi~~~~gD~~~~~~n~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 431 (518) .+.+++++|+++++|+|+++.- +.+++ .|. +........ ++..+.++.+...+....++ T Consensus 374 a~~~~~~~g~i~~~e~r~~L~~~g~~~~i~~--~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 437 (437) T protein:vir:52 374 AANTLIQNGVLNEYQIANELRESGLFANISA--EHI----------EELKNADEFAGNFEEPEKMEGAQVQNSEDQ 437 (437) T ss_pred HHHHHHhcCCCCHHHHHHHHHhcCCCCCCCc--ccc----------ccccCCCCCCCccCCCCCCCCCCCCCCCCC Confidence 5777899999999999999842 22221 110 000000000 00000000000000000000 No 107 >protein:vir:107742 Length: 537 # NCBI annotation: gp28 # Family: family:all:297 # MgeID: mge:1520 # MgeName: BcepB1A # Cross-refs: genbank:acc:YP_024875;genbank:gi:48697517;genbank:GeneID:2948359 Probab=99.92 E-value=5.4e-25 Score=153.63 Aligned_cols=424 Identities=11% Similarity=0.076 Sum_probs=218.5 Q ss_pred CCCCC---------------------CCCCccccccc-cc-hhhhhhh-------ccCccCC---------cccCccchh Q lcl|Aclame:pro 1 MLLAN---------------------GQTLSAPAMAE-LS-PQMQDSY-------YYAPAVG---------MQLERQFSL 41 (518) Q Consensus 1 ~~f~~---------------------~~~~~~~~~~~-~~-~~~~~~~-------~~~~~~~---------~~~~~~~~~ 41 (518) -+|+. .+....+.... .. ...++.. +...... .+.....-. T Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 105 (537) T protein:vir:10 26 GIFGAGDDEKPFTRAQLVHQTMMAIRDHAIAMMPKVDGSHPDMAMDGLDVEGGTFSAYANPNLSEGLVLWYAQQAFIGHQ 105 (537) T ss_pred CCCcccchhhHHHHHHhhhhccCCCCCccCcccccccccccchhccccccchhhhhhhccccccchhhhhccccCCccHH Confidence 01110 00000000000 00 0011110 0000000 000001112 Q ss_pred hHHHHhhhHHHHHHHHHHHHhhccCceEEEEecCCceeeecchHHHHHhhccCccCCHHHHHHHHHHHHHHcCCeeEEee Q lcl|Aclame:pro 42 YGGIYKNQPWVRTVIAKRAQALARLPVKCMFTSGDTETEEHDTGYAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQ 121 (518) Q Consensus 42 ~~~~~~~~~~v~~~v~~ia~~ia~lp~~v~~~~~~~~~~~~~~~~~~l~~~PN~~~t~~~f~~~~~~~~ll~G~~~~~i~ 121 (518) ...+|.+++.++.+|+.+|+.+.+-++.+.-.+++ .........+....+....+..|.+.+.+. .++|.+++++. T Consensus 106 l~a~Y~~~~l~r~iVd~~A~d~~r~~~~i~~~~~~---~~~~~~~~~l~~~~~~l~~~~~l~~a~~~~-rlyG~~~i~i~ 181 (537) T protein:vir:10 106 MCALIATHWLVNKACSQMPRDAMRKGYKIISDDGN---ELDPKDAKFIDRYDRAFNIKKHAIQFVRKG-RIFGIRIALFK 181 (537) T ss_pred HHHHHHhCchhhhhhhhhhHHhhcCCceeecCCcc---cccHHHHHHHHHHHHHhhHHHHHHHHHHhc-ccccceEEEEe Confidence 34678899999999999999999999988543322 222222333433434444455565555444 45798888765 Q ss_pred eC-CC---------------CceeeeeeeCCcceEEEec----c------CcceEEEEeeccCCCCceeEEEeeeeeEEe Q lcl|Aclame:pro 122 KN-KS---------------GTPEKLMPMHPSRVAIKRN----S------RTGRYEYYFQAGAGVGTQLVSFADDEVVPI 175 (518) Q Consensus 122 ~~-~~---------------G~~~~l~~l~p~~v~~~~~----~------~~~~~~~~~~~~~~~~~~~~~~~~~~vih~ 175 (518) -. .+ |.+..|.+++|..+.+... . .+....|.+. ...+.++.|||| T Consensus 182 v~~~D~~~~~~Pl~~~~i~kg~~k~l~vidp~~~~~~~~~~~~~dp~sp~fg~P~~y~v~--------g~~iH~SRli~f 253 (537) T protein:vir:10 182 VDSPDPYYYEKPFNIDGVMPGAYKGIVQIDPYWCAPLLDAQASSNPVSMHFYEPTYWLIN--------GKKYHRSHLAIY 253 (537) T ss_pred ecCcCCcccccccccccccccceeEEEEechhhcccccchhhhccCCccccCCceeeeec--------CeEecceeEEEe Confidence 32 22 2345677888877764321 1 1222333321 246889999999 Q ss_pred ecCCC------CcccccchHHHHHHHHHHHHHHHHHHHHHHHHccCCcceeeeeCCcC-CHHHHHHHHHHHHHHhcCccc Q lcl|Aclame:pro 176 RFFNP------DGLERGLSLMESLKSTIFSEDSSRNATAAMWKNAGRPNLVLRHEKRL-SPEAQQRLREQFDRAHAGSSN 248 (518) Q Consensus 176 ~~~~~------~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~p~gil~~~~~~-~~e~~~~~~~~~~~~~~g~~n 248 (518) .+... ...++|.|.++.++..|.....+.......+.........+.....+ +++++.+..+.|. ++.+| T Consensus 254 ~g~~~p~~~~~~~~~~G~Svlq~~~~~l~~~~~t~~~~~~l~~~~~~~v~k~~~~~~l~~~~~~~~r~~~~~---~~r~n 330 (537) T protein:vir:10 254 INDEVVDFLKPSYIYGGVPLPQQIMERVYAAERTANEGPMLAMTKRQTVLKVDAAQVLANKQQFDETMSWWT---ATRDN 330 (537) T ss_pred cCCCCchhhhcccCcccccHHHHHHHHHHHHHHHHHHHHHHHHhcCCceeeechHHhhcCHHHHHHHHHHHH---hhcCC Confidence 65532 23356999999999999998888888888777766553333222222 3344433333333 33334 Q ss_pred cccceeccC-CcccccccCChhhHHHHHHHHHHHHHHHHHhccchHh-hccccccccccHHHHHHHHHHH------HHHH Q lcl|Aclame:pro 249 TGKTMVVEE-GMEPIPLQLTAVEMQFIEARQLNREEVCGVYDIAPPI-VHILDRATFSNISAQMRAFYRD------TMAI 320 (518) Q Consensus 249 ~g~~~vl~~-g~~~~~~~~~~~d~q~~e~~~~~~~~Ia~~fgVpp~~-lg~~~~~~~s~~e~~~~~~~~~------~l~P 320 (518) . ++++++. +.+|+.+..+..+ +.++.....+.||.+.+||... +|....+-.++.+.....|+.. .|.| T Consensus 331 ~-g~~~id~e~e~~e~~~~~lsg--l~~~l~~~~~~iAa~~~IP~t~L~G~sp~GlnatGe~D~~~yyd~I~~~Qe~l~p 407 (537) T protein:vir:10 331 Y-QVRVVDKDNEDVVQIDTTLND--LDKVIMNQYQLVCAIARTPAPKMLGTVPTGFNSTGDYEEASYHEECESTQDDMRP 407 (537) T ss_pred c-ceeEecCCCceeEEEeccCCC--HHHHHHHHHHHHHhhhCCCceeeccCCccccccchhHHHHHHHHHHHHHHHHHHH Confidence 3 4456654 6888877765555 4467778888999999999985 4544344445556555555533 4788 Q ss_pred HHHHHHHHHHhhhcchhhccceeeechhhhhccCHHHHHHH-------HHHHHhCCCcCHHHHHHHHhCCCCCCccCcee Q lcl|Aclame:pro 321 PIARIQSAMDKYVGQYWVRKNRMKFDIDDVIQPDWEAKSES-------TQKMVNSGVATPNEGREIMGLPRSDDPKADEL 393 (518) Q Consensus 321 ~~~~ie~~ln~~l~~~~~~~~~~~fd~~~l~~~d~~~~~~~-------~~~~~~~g~~T~NE~R~~~g~~pi~~~~gD~~ 393 (518) .++.+.+.|.+..+.. ...+.|.+..|...|.++++++ +++++.+|++++||+|+.|+..|.. +-+.+ T Consensus 408 ~l~~l~~ll~~~~~~~---~~~~~i~f~pL~~~s~kEkAei~~~~a~a~~~~~~~G~i~~~Evr~~L~~~~~~--g~~~l 482 (537) T protein:vir:10 408 LIDRHHQLVCRSHLRK---RIRVKVEFPPMDAPKESERADTFLKKMQAAKLAFEMGAVDGVDVNEYLRMDPTL--GFTSI 482 (537) T ss_pred HHHHHHHHHHHhcCCC---CcceEEEeCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhccCcc--ccccc Confidence 8888887777655432 3346667778888888877765 7788999999999999999987653 11212 Q ss_pred eecccccccccccccCCCCCCCCCCCCcccCCCCCccCCcccc-ccccChhhhcchhHH Q lcl|Aclame:pro 394 YANSALQPLGATPDGAVEGEEAPAPKRPASTPVASLDQSPPAS-VPGLSPTNSDRSTDS 451 (518) Q Consensus 394 ~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 451 (518) . + +. +.+.........+..+.... ...+...+....... .....+..++...+. T Consensus 483 ~-~-~~-~~ed~e~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~ 537 (537) T protein:vir:10 483 T-P-AM-RPTDAEDIDVDDEGKPVRII-EDQPAPSEMFGATSSGESANDPRDSGAAFED 537 (537) T ss_pred c-C-CC-ChhhhhcccCCccCCcCCCC-CCCCCccccCCCCccccccCCCccCccccCC Confidence 1 1 11 11111111000000000000 000000000000000 000000011111111 No 108 >protein:vir:108215 Length: 469 # NCBI annotation: gp6 # Family: family:all:2372 # MgeID: mge:2004 # MgeName: Giles # Cross-refs: genbank:acc:YP_001552335;genbank:gi:160700655;genbank:GeneID:5758935 Probab=99.92 E-value=2.9e-24 Score=149.62 Aligned_cols=422 Identities=12% Similarity=0.059 Sum_probs=252.1 Q ss_pred CCCCCCCccc--cccccchhhhhhhccCcc---CCccc--CccchhhHHHHhhhHHHHHHHHHHHHhhccCceEEEEecC Q lcl|Aclame:pro 3 LANGQTLSAP--AMAELSPQMQDSYYYAPA---VGMQL--ERQFSLYGGIYKNQPWVRTVIAKRAQALARLPVKCMFTSG 75 (518) Q Consensus 3 f~~~~~~~~~--~~~~~~~~~~~~~~~~~~---~~~~~--~~~~~~~~~~~~~~~~v~~~v~~ia~~ia~lp~~v~~~~~ 75 (518) |--..+++.| ..+.....-...++.... .+..+ .....++.++..+.+.|.+|++.+...|.+++|.|...++ T Consensus 1 ~~~~~~~~~p~~~~g~~~~~~~~~~~~~~~~~e~~~~lr~~~~~~ly~~m~e~D~~i~s~l~~rk~av~~~~w~v~p~~~ 80 (469) T protein:vir:10 1 MTERVKTAAPVSEAGYVFGSGVVDGWTVWDPFEQTPELQWPQSVAVYSRMDNEDSRVTSLLEAISLPIRSTPWRIRANGA 80 (469) T ss_pred CCCcccCCCCccchhhhhhcccccchhhccccccccccccccchHHHHHHHhhChHHHHHHHHHHHHHhcCCceEecCCC Confidence 3333333333 222221100011111000 00011 1234466777778999999999999999999999976544 Q ss_pred CceeeecchHHHHHhhcc-------------CccCCHHHHHHHHHHHHHHcCCeeEEeeeCCC-----C--ceeeeeeeC Q lcl|Aclame:pro 76 DTETEEHDTGYAKLLADP-------------CEYLDPFAFWEWVASTLDIYGETYLAIQKNKS-----G--TPEKLMPMH 135 (518) Q Consensus 76 ~~~~~~~~~~~~~l~~~P-------------N~~~t~~~f~~~~~~~~ll~G~~~~~i~~~~~-----G--~~~~l~~l~ 135 (518) +.... ..+...+..+ +...++.+++..++.+.+.+|.++.++++... | .+..|.+.+ T Consensus 81 ~~e~~---~~~~~~L~~~~~~~~~~~~~~~~~~~~~w~~~l~~~l~~a~~~G~s~~Eivw~~~~~~~dG~~~~~~l~~rp 157 (469) T protein:vir:10 81 SDEVT---EFVSRNLMVPIDGEDDVRNPGRSRGRFSWAEHLEEVTSPTLQFGHAVFEQVYRPRNQSPDGRFWLRKLAPRP 157 (469) T ss_pred CHHHH---HHHHHHHHhhhhhhhhhhhhhhhhccccHHHHHHHHHHHhhhhCceeeeeeeecccccCCCceeeeeeeecC Confidence 32111 1111111211 12347888888888888889999999998754 3 255677777 Q ss_pred CcceE-EEeccCcceEEEEeeccC--------CCCceeEEEeeeeeEEeecCCCCcccccchHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 136 PSRVA-IKRNSRTGRYEYYFQAGA--------GVGTQLVSFADDEVVPIRFFNPDGLERGLSLMESLKSTIFSEDSSRNA 206 (518) Q Consensus 136 p~~v~-~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~ 206 (518) +.++. ...+.+++...+...... ..+...+.+++..+|++++....+..+|.|.+..++..+.......++ T Consensus 158 ~~~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lp~~k~i~~~~~~~~g~p~g~gLlr~~~~~~~fK~~~~~~ 237 (469) T protein:vir:10 158 QWTISKFNVAPDGGLESIEQIAPPARTRGSLYVANIAPPEIPVNRLVVYTRNKRPGQWQGKSILRSAYKHWLLKDKLLRI 237 (469) T ss_pred cccceeeeeccCCceeeeeecCcccccccccccCCCCccccccCcEEEEEecCCCCCcccchhHHHHHHHHHHHHHHHHH Confidence 77653 344555555544321110 011234567888888888877778889999999999999999999999 Q ss_pred HHHHHHccCCcceeeeeCCcCCHHHHHHHHHHHHHHhcCccccccceeccCCcccccccCChhhHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 207 TAAMWKNAGRPNLVLRHEKRLSPEAQQRLREQFDRAHAGSSNTGKTMVVEEGMEPIPLQLTAVEMQFIEARQLNREEVCG 286 (518) Q Consensus 207 ~~~~~~ng~~p~gil~~~~~~~~e~~~~~~~~~~~~~~g~~n~g~~~vl~~g~~~~~~~~~~~d~q~~e~~~~~~~~Ia~ 286 (518) ...|.+.-|.|--+.+++...++++++.+.+...+...|. ++ .+|++.|++++-+..+.....|.+..++..++|+. T Consensus 238 w~~f~EryG~P~~vgky~~~a~~~ek~~l~~a~~~~~~g~-~a--~~iip~~~~ie~~ea~g~~~~~~~li~~~d~~Isk 314 (469) T protein:vir:10 238 EAATAERNGMGIPVGTASSATDEDEVRKMAALARSVRGGI-NA--GVGLAQGQILELLGVSGNLPDIRRAIEGHDRSIAL 314 (469) T ss_pred HHHHHHHcCCcceEEecCCCCCHHHHHHHHHHHHHHhcCC-ce--EEEccCCceEEEeecCCCchHHHHHHHHHHHHHHH Confidence 9999999999999999999999999999998888875553 22 46789998887776666666788999999999988 Q ss_pred HhccchHhhccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHhhhcchhh------ccceeeechhhhhccCHHHHHH Q lcl|Aclame:pro 287 VYDIAPPIVHILDRATFSNISAQMRAFYRDTMAIPIARIQSAMDKYVGQYWV------RKNRMKFDIDDVIQPDWEAKSE 360 (518) Q Consensus 287 ~fgVpp~~lg~~~~~~~s~~e~~~~~~~~~~l~P~~~~ie~~ln~~l~~~~~------~~~~~~fd~~~l~~~d~~~~~~ 360 (518) ++-- ..+-.....++++. .+.........+.-.++.|+..||+.|++..- ...+.+|.+.... .+.+..++ T Consensus 315 ~iLG-~tlTs~~~gGS~a~-~~vh~ev~~d~~~sDa~~i~~tln~~li~~l~~lN~g~~~~~P~~~~~~~e-~~~~~~a~ 391 (469) T protein:vir:10 315 SGLA-HFLNLDGKGGSYAL-ASVLEDPFTQAVHAYATSICRIANQHIIEDLVDINFGVDTPAPVLTFDPIG-SRQDLTAA 391 (469) T ss_pred HHhc-ccccccCccchhhH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEecCCC-CcHHHHHH Confidence 7521 22221112233333 33344566678888999999999988765421 1122344444443 56677899 Q ss_pred HHHHHHhCCCc-----CHHHHHHHHhCCCCCCccCceeeecccccccccccccCCCCCCCCCCCCcccCCCCCccCCccc Q lcl|Aclame:pro 361 STQKMVNSGVA-----TPNEGREIMGLPRSDDPKADELYANSALQPLGATPDGAVEGEEAPAPKRPASTPVASLDQSPPA 435 (518) Q Consensus 361 ~~~~~~~~g~~-----T~NE~R~~~g~~pi~~~~gD~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 435 (518) .+++++..|++ +.+.+|+.+|+|+..+ ++....+.. | .....+.. .+.........+..+..+. T Consensus 392 ~i~~l~~~G~~~~~~~~~~~~~e~~gip~~~~--~~~~~~~~~--~------~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 460 (469) T protein:vir:10 392 AVKLLYDAGVFDDDPAVKRAIRQRFNLPSELN--DTPSAEPEE--P------AAVPNQSA-APARTRSSGNADARARAPK 460 (469) T ss_pred HHHHHHhcCCccCccccHHHHHHHhCCCCCCC--Ccccccchh--c------ccCCCCCc-cccccCCCCCcccccccCC Confidence 99999999984 4567999999986652 332211110 0 00000000 0000000000000000000 Q ss_pred cccccChhhhcchhHHHHHHHHHHhhccCcchh Q lcl|Aclame:pro 436 SVPGLSPTNSDRSTDSGKTEPRRLMQKPPPKES 468 (518) Q Consensus 436 ~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~ 468 (518) . ...... |+ T Consensus 461 ~------------~~~~l~------------da 469 (469) T protein:vir:10 461 A------------DQGVLF------------DA 469 (469) T ss_pred C------------hHHhhc------------cC Confidence 0 000000 00 No 109 >protein:vir:94049 Length: 532 # NCBI annotation: hypothetical protein # Family: family:all:297 # MgeID: mge:1493 # MgeName: OP2 # Cross-refs: genbank:acc:YP_453629;genbank:gi:84662665;genbank:GeneID:5142559 Probab=99.91 E-value=7.5e-25 Score=152.85 Aligned_cols=434 Identities=11% Similarity=0.039 Sum_probs=224.8 Q ss_pred CCCCCCCCCccccc-----cccchhhhh--hhccC--ccC----CcccCccchhhHHHHhhhHHHHHHHHHHHHhhccCc Q lcl|Aclame:pro 1 MLLANGQTLSAPAM-----AELSPQMQD--SYYYA--PAV----GMQLERQFSLYGGIYKNQPWVRTVIAKRAQALARLP 67 (518) Q Consensus 1 ~~f~~~~~~~~~~~-----~~~~~~~~~--~~~~~--~~~----~~~~~~~~~~~~~~~~~~~~v~~~v~~ia~~ia~lp 67 (518) +...+..+...... ....+.+.. ..++. ... +............+|.+++.++++|+.+|+.+.+-. T Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~l~a~Y~~~~l~r~~Vd~~aed~~r~~ 112 (532) T protein:vir:94 33 LGLATAHEIDPTAYSPYERNAAQNAMAMDYGLQTGRNGRNALSFVEATSWPGFPTLALLAQLPEYRTMHETPADECVRAW 112 (532) T ss_pred hhhhhhhhhcccccccccccccccccccccccCcccccccccccccccccchHHHHHHHHcCchhhhhhccchHHHhhCC Confidence 22222211111000 000000000 00000 000 001111112234578899999999999999999999 Q ss_pred eEEEEecCCceeeecchHHHHHhhccCccCCHHHHHHHHHHHHHHcCCeeEEeeeCC-------------------CCce Q lcl|Aclame:pro 68 VKCMFTSGDTETEEHDTGYAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQKNK-------------------SGTP 128 (518) Q Consensus 68 ~~v~~~~~~~~~~~~~~~~~~l~~~PN~~~t~~~f~~~~~~~~ll~G~~~~~i~~~~-------------------~G~~ 128 (518) +.+.-.++.. ........+........-+..|.+ .+.+..++|.+++++.... .|.+ T Consensus 113 ~~i~~~~~~~---~~~~~~~~i~~~~~~l~v~~~l~~-a~~~~rlyG~a~i~i~v~~~~~~~~~~~p~~l~~~~I~~g~~ 188 (532) T protein:vir:94 113 GKITCSSKDE---LAADKATRITQKLEQYNVRTLVRT-VVIHDQAYGGAHVFPHLKMDGDSVPADAPLLLSPSFVQRGCL 188 (532) T ss_pred ceEeeCCccc---cchHHHHHHHHHHHhhhHHHHHHH-HHHhhhcccceEEEEEeccCCcccccccccccccccccccee Confidence 9986433222 122222222222222222233333 4445557899988765432 2334 Q ss_pred eeeeeeCCcceEEEeccC--------cceEEEEeeccCCCCceeEEEeeeeeEEeecCCC------CcccccchHHHHHH Q lcl|Aclame:pro 129 EKLMPMHPSRVAIKRNSR--------TGRYEYYFQAGAGVGTQLVSFADDEVVPIRFFNP------DGLERGLSLMESLK 194 (518) Q Consensus 129 ~~l~~l~p~~v~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~vih~~~~~~------~~~~~G~s~~~~~~ 194 (518) .+|.+++|..|++..... +....|.+. .+ ..++++.||||.+... ...++|.|.++.++ T Consensus 189 ~~l~vld~~~v~p~~~~~~dp~sp~fg~P~~y~v~-----~g--~~iH~SRli~f~g~~~p~~~~~~~~~~G~Svlq~~~ 261 (532) T protein:vir:94 189 IGFATIEPMWLSPNAYNATDPTLPSFYKPDSWIAT-----SG--KKIHSSRIHTVVGRPVGDMLKAAYSFRGVSISQLAM 261 (532) T ss_pred eEEEeechheecccccccccccccccCCceeEEEc-----cC--eeeccceEEEecCCCchhhhccccccccccHHHHHH Confidence 678888888877643211 112223221 12 3588999999975432 22347999999999 Q ss_pred HHHHHHHHHHHHHHHHHHccCCcceeeeeCCcCCHHHHHHHHHHHHHHhcCccccccceeccC-CcccccccCChhhHHH Q lcl|Aclame:pro 195 STIFSEDSSRNATAAMWKNAGRPNLVLRHEKRLSPEAQQRLREQFDRAHAGSSNTGKTMVVEE-GMEPIPLQLTAVEMQF 273 (518) Q Consensus 195 ~~i~~~~~~~~~~~~~~~ng~~p~gil~~~~~~~~e~~~~~~~~~~~~~~g~~n~g~~~vl~~-g~~~~~~~~~~~d~q~ 273 (518) ..|.....+.................+..-..++.+..+++.+.+.....+-+| .++++++. +.+|+.++.+..+ + T Consensus 262 ~~l~~~~~t~~~~~~l~~~~~~~v~k~~~a~~ls~~~~~~~~~r~~~~~~~~~n-~g~~~id~~~e~~e~~~~~lsg--l 338 (532) T protein:vir:94 262 PYVDNWLRTRQSVSDTVKQFSMTNLATDMAQLLAPGGAQSLDARLQLFNLYRDN-RNIGALDKGTEEIQQTNTPLSG--L 338 (532) T ss_pred HHHHHHHHHHHHHHHHHHhcCCceeeechHHhhcchhHHHHHHHHHHHHhhcCC-ccceEEcCCCceeEEEecccCC--H Confidence 999999988888777666644443222222334555566666666654444334 44566664 5678877766555 4 Q ss_pred HHHHHHHHHHHHHHhccchHhh-ccccccccccHHHHHHHHHH-------HHHHHHHHHHHHHHHhhhcchhhccceeee Q lcl|Aclame:pro 274 IEARQLNREEVCGVYDIAPPIV-HILDRATFSNISAQMRAFYR-------DTMAIPIARIQSAMDKYVGQYWVRKNRMKF 345 (518) Q Consensus 274 ~e~~~~~~~~Ia~~fgVpp~~l-g~~~~~~~s~~e~~~~~~~~-------~~l~P~~~~ie~~ln~~l~~~~~~~~~~~f 345 (518) .+........||.+.+||..+| |...++-.++.+.....|+. ..+.|.++.+-+.|.+..+-.....+.++ T Consensus 339 ~~~l~~~~~~iAaa~~IP~t~LfG~sp~GlnstGe~D~~~yyd~I~s~Qe~~l~p~le~l~~~l~~s~~g~~~~d~~~~- 417 (532) T protein:vir:94 339 DSLQAQSQEQMAAVSHIPLVKLLGITPNGLNASSDGEIRVWYDFIAGYQATNLTPLMEWIIDLIQLSEYGQIDPGLAWE- 417 (532) T ss_pred HHHHHHHHHHHHhHhCCCeeeeecCCcccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCceEE- Confidence 5677778889999999999854 54333333444545555554 45788888888777655443333344444 Q ss_pred chhhhhccCHHHHHH-------HHHHHHhCCCcCHHHHHHHHhCCCCCCccCceeeecccccccccccc----cCCCCCC Q lcl|Aclame:pro 346 DIDDVIQPDWEAKSE-------STQKMVNSGVATPNEGREIMGLPRSDDPKADELYANSALQPLGATPD----GAVEGEE 414 (518) Q Consensus 346 d~~~l~~~d~~~~~~-------~~~~~~~~g~~T~NE~R~~~g~~pi~~~~gD~~~~~~n~~~~~~~~~----~~~~~~~ 414 (518) +.+|...+.+++++ .+++++++|++++||+|+.++..|.. +.+....... .+..... ....... T Consensus 418 -f~pL~~~s~kEkAei~~~~a~a~~~~~~~Gvi~~~Evr~~l~~~~~~--~~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 492 (532) T protein:vir:94 418 -WSPLMELDDKELAEVRQLNASTDSTLMELGVIDAKMVQQRLAADPTS--GYAGALGERD--ELDDVEEIAKQLMAAALN 492 (532) T ss_pred -eCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHhcCCcc--cccccccccc--ccccccchhhhhcccccC Confidence 45676677666555 45778999999999999999998864 3332221111 1111110 1111111 Q ss_pred CCCCCCcccCCCCCccCCccccccccChhhhcchhHHHHHHHHHHhhccCcch Q lcl|Aclame:pro 415 APAPKRPASTPVASLDQSPPASVPGLSPTNSDRSTDSGKTEPRRLMQKPPPKE 467 (518) Q Consensus 415 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ 467 (518) .++......++..+...++....+..+++ - .....|.++. T Consensus 493 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~-------~------~~~~~~~~~~ 532 (532) T protein:vir:94 493 PPATAPQTPNPQPDSEDDQTDNQPDAQAD-------P------AQNDQPVGNR 532 (532) T ss_pred CCCCCCCCCCCCCCCCCCCCCCccCCCcc-------c------cccCCCcCCC Confidence 11111111111111111111111111100 0 0112344443 No 110 >protein:vir:99232 Length: 526 # NCBI annotation: putative portal protein # Family: family:all:313 # MgeID: mge:1649 # MgeName: DMS3 # Cross-refs: genbank:acc:YP_950451;genbank:gi:119953652;genbank:GeneID:4643092 Probab=99.91 E-value=7.3e-23 Score=141.95 Aligned_cols=472 Identities=13% Similarity=0.086 Sum_probs=258.9 Q ss_pred CCCCCCCCCccc---cccccchhhhhhhccCccCCcccCc---------------cchhhHHHHhhhHHHHHHHHHHHHh Q lcl|Aclame:pro 1 MLLANGQTLSAP---AMAELSPQMQDSYYYAPAVGMQLER---------------QFSLYGGIYKNQPWVRTVIAKRAQA 62 (518) Q Consensus 1 ~~f~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~v~~~v~~ia~~ 62 (518) =..|+....+.- ..+.+ ..+...+.+.+..|....+ ...++.++..+.+.|.+|++.+... T Consensus 6 d~~g~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~gltp~~l~~iLr~a~~gd~~~~~~L~e~m~e~D~~i~s~l~~Rk~a 84 (526) T protein:vir:99 6 DVYGNPIRTQQLREPQTSRL-AGLAKEFAQHPAKGLTPAKLARILVEAEQGNLQAQAELFMDMEERDAHLFAEMSKRKRA 84 (526) T ss_pred CCCCCccccccccchhhhhh-hhhhhhhcccCcCCCCHHHHHHHHHhhhCCCHHHHHHHHHHHHhhChHHHHHHHHHHHH Confidence 224443322211 11111 1223344444444432211 1123444445799999999999999 Q ss_pred hccCceEEEEecCCceee-ecchHHHHHhhccCccCCHHHHHHHHHHHHHHcCCeeEEeeeCCCC---ceeeeeeeCCcc Q lcl|Aclame:pro 63 LARLPVKCMFTSGDTETE-EHDTGYAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQKNKSG---TPEKLMPMHPSR 138 (518) Q Consensus 63 ia~lp~~v~~~~~~~~~~-~~~~~~~~l~~~PN~~~t~~~f~~~~~~~~ll~G~~~~~i~~~~~G---~~~~l~~l~p~~ 138 (518) |.+++|.|....++.... .....+..++ +....+.+++..++ +.+.+|-++.++++..+| .+..+.+.++.+ T Consensus 85 v~~~~w~I~p~~~~~~~~~~~a~~v~~~l---~~~~~~~~~i~~~l-da~~~G~s~~Eivw~~~~g~~~~~~l~~r~~~~ 160 (526) T protein:vir:99 85 ILGLDWAVEPPRNASAAEKADADYLHELL---LDLEGLEDLLLDAL-DGIGHGYSCIELEWALQGREWMPLAFHHRPQSW 160 (526) T ss_pred HhCCCceEecCCCCCHHHHHHHHHHHHHH---hcccCHHHHHHHHH-HhhhhcceeEEEEEeecCCceeEEEeeeecccc Confidence 999999998754433221 1111222222 22224667777655 577899999999987654 466888888887 Q ss_pred eEEEeccCcceEEEEeeccCCCCceeEEEeeeeeEEeecCCCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHccCCcc Q lcl|Aclame:pro 139 VAIKRNSRTGRYEYYFQAGAGVGTQLVSFADDEVVPIRFFNPDGLERGLSLMESLKSTIFSEDSSRNATAAMWKNAGRPN 218 (518) Q Consensus 139 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~p~ 218 (518) +.+..+.. ..+.+. . +.. ....+++...|..++....+.++|.+.+..++..+.......++...|.+..|.|- T Consensus 161 f~~~~~~~-~~l~~~--~-~~~--~g~~l~~~k~i~~~~~~~~g~p~g~gLlr~~~w~~~fK~~~~~~w~~f~E~yG~P~ 234 (526) T protein:vir:99 161 FQLNPEDQ-NELRLR--D-NSP--AGEALQPFGWIIHRPRARSGYVARSGLFRVLAWPYLFRHYATSDLAEMLEIYGLPI 234 (526) T ss_pred eeeccCCC-cEEEec--C-CCC--CceeecCCCeEEEeecCCcCCccccchHHHHHHHHHHHHhhHHHHHHHHHHcCCce Confidence 77655432 222221 1 112 22456776665556666677889999999999999999999999999999999999 Q ss_pred eeeeeCCcCCHHHHHHHHHHHHHHhcCccccccceeccCCcccccccCCh-hhHHHHHHHHHHHHHHHHHhccchHhhcc Q lcl|Aclame:pro 219 LVLRHEKRLSPEAQQRLREQFDRAHAGSSNTGKTMVVEEGMEPIPLQLTA-VEMQFIEARQLNREEVCGVYDIAPPIVHI 297 (518) Q Consensus 219 gil~~~~~~~~e~~~~~~~~~~~~~~g~~n~g~~~vl~~g~~~~~~~~~~-~d~q~~e~~~~~~~~Ia~~fgVpp~~lg~ 297 (518) -+.+++.+.++++++++.+.+.+..+. ..+|++.|++++-+..+. ...-|.+..++..++|+.++ +-..+-.. T Consensus 235 ~igky~~~a~~~ek~~L~~av~~i~~d-----~~~iiP~~~~ie~~ea~~~~~~~f~~li~~~d~~Isk~i-LGqtlTs~ 308 (526) T protein:vir:99 235 RLGKYPPGTADEEKATLLRAVTGLGHA-----AAGIIPETMAIDFQQAAQGSSEPFLAMMRQSEDAISKAV-LGGTLTST 308 (526) T ss_pred EEEecCCCCCHHHHHHHHHHHHHHhhC-----cEEEecCCceeEEeecCCCCHHHHHHHHHHHHHHHHHHH-hhhhhccc Confidence 999999988999999999888776432 358888888776655322 22347888888889998874 22222111 Q ss_pred ---ccccccccHHHHHHHHHHHHHHHHHHHHHHHHHhhhcchhhc---------cceeeechhhhhccCHHHHHHHHHHH Q lcl|Aclame:pro 298 ---LDRATFSNISAQMRAFYRDTMAIPIARIQSAMDKYVGQYWVR---------KNRMKFDIDDVIQPDWEAKSESTQKM 365 (518) Q Consensus 298 ---~~~~~~s~~e~~~~~~~~~~l~P~~~~ie~~ln~~l~~~~~~---------~~~~~fd~~~l~~~d~~~~~~~~~~~ 365 (518) +..++++..+. ........+.-.++.|+..||+.|+...-. ..+.+|.+......|.+.+++.++++ T Consensus 309 ~~~g~~gS~a~g~v-h~~v~~di~~aDa~~i~~tln~~Li~~l~~~N~~~~~~~~~~p~~~~~~~e~eDl~~~a~~~~~L 387 (526) T protein:vir:99 309 TSQSGGGAFALGQV-HNEVRHDLLASDARQLAATLSRDLLWPLLVLNRPGSPDVRRAPRLVFDLREQADITSMAQSIPAL 387 (526) T ss_pred cccCcchhhhHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcCCccccceEEeCCCCcccHHHHHHHHHHH Confidence 11122332222 344566678889999999999877643221 11223333445678899999999999 Q ss_pred HhCCC-cCHHHHHHHHhCCCCCCccCceeeecccccccccccccCCCCCCCCCCCCcccCCCCCccCCccccccccChhh Q lcl|Aclame:pro 366 VNSGV-ATPNEGREIMGLPRSDDPKADELYANSALQPLGATPDGAVEGEEAPAPKRPASTPVASLDQSPPASVPGLSPTN 444 (518) Q Consensus 366 ~~~g~-~T~NE~R~~~g~~pi~~~~gD~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 444 (518) +..|+ ++..++|+++|+|.-. .++.++.+....+ ... ........ ....... +..+.. T Consensus 388 ~~~G~~i~~~~i~e~~Gip~~~--~~e~~l~~~~~~~--------~~~--~~~~~~~~---~~~~~~~--~~~~~~---- 446 (526) T protein:vir:99 388 VNVGLEIPSAWVYDKLGIPQPA--KNEPVLRSAAQPA--------ILS--RQHGQRVA---ALATIVG--PRYGDQ---- 446 (526) T ss_pred HhCCCccCHHHHHHHhCCCCCC--CcccccCCCCCCc--------ccc--cccccccc---ccccccc--ccCcch---- Confidence 99997 8999999999997643 2333322211000 000 00000000 0000000 000000 Q ss_pred hcchhHHHHHHHHHHhhccCcchhHHHHHHHHHHHhhhhhhhcccccchhhhh----hhHHHHHHHHHHHHhhhcccC Q lcl|Aclame:pro 445 SDRSTDSGKTEPRRLMQKPPPKESSPKHLRAVKGAMGRGKDIKGFALQLAEKY----PDDLEDILLAVQLALAERKDN 518 (518) Q Consensus 445 ~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~ 518 (518) ...+...... + ............+.+.+++...++++....+..+.+ .++|++++ +-...+|.+.-. T Consensus 447 --~~~d~~l~~~---~-~~~~~~~~~~~l~~i~~~l~~~~s~ee~~~~L~~l~~~ld~~~l~~~l-~~a~~~A~l~Gr 517 (526) T protein:vir:99 447 --QALDKALADL---P-AKDMQNQANDLLAPLLEAVNRGDSETELLGALAEAFPDMDDSALTDAL-HRLLFAADTWGR 517 (526) T ss_pred --hhHHHHHHHH---H-HHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHhccCCHHHHHHHH-HHHHHHHHHhhh Confidence 0000000000 0 000111222333444444444443332222222222 12222211 111122222111 No 111 >protein:vir:103860 Length: 528 # NCBI annotation: portal protein # Family: family:all:313 # MgeID: mge:1522 # MgeName: D3112 # Cross-refs: genbank:acc:NP_938234;genbank:gi:38229139;genbank:GeneID:2648175 Probab=99.91 E-value=8.8e-23 Score=141.51 Aligned_cols=475 Identities=13% Similarity=0.084 Sum_probs=257.3 Q ss_pred CCCCCCCCCcccccc--ccchhhhhhhccCccCCcccCc-----------c----chhhHHHHhhhHHHHHHHHHHHHhh Q lcl|Aclame:pro 1 MLLANGQTLSAPAMA--ELSPQMQDSYYYAPAVGMQLER-----------Q----FSLYGGIYKNQPWVRTVIAKRAQAL 63 (518) Q Consensus 1 ~~f~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~-----------~----~~~~~~~~~~~~~v~~~v~~ia~~i 63 (518) =.+||....+.-... ..-.++...+.+.+..|....+ + ..++.++..+.+.|.+|++.+...| T Consensus 6 d~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~gltp~~l~~il~~a~~gd~~~~~~L~~~m~e~D~~i~s~l~~Rk~av 85 (528) T protein:vir:10 6 DIYGNPLRTQQLRKQQTAHLAGLAKEFANHPAKGLTPAKLAHILIEAEQGHLQAQAELFMDMEERDAHLFAEMSKRKRAV 85 (528) T ss_pred CCCCCccccccccchhhhhhhhhhhhhcccCCCCCCHHHHHHHHHhhhCCCHHHHHHHHHHHHhhChHHHHHHHHHHHHH Confidence 235664443321111 1111233344444444432211 1 1223344457999999999999999 Q ss_pred ccCceEEEEecCCceee-ecchHHHHHhhccCccCCHHHHHHHHHHHHHHcCCeeEEeeeCCCC---ceeeeeeeCCcce Q lcl|Aclame:pro 64 ARLPVKCMFTSGDTETE-EHDTGYAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQKNKSG---TPEKLMPMHPSRV 139 (518) Q Consensus 64 a~lp~~v~~~~~~~~~~-~~~~~~~~l~~~PN~~~t~~~f~~~~~~~~ll~G~~~~~i~~~~~G---~~~~l~~l~p~~v 139 (518) .+++|.|....++.... .....+..++. ....+.+++..+ .+.+.+|.++.++++..+| .+..+.+.++.++ T Consensus 86 ~~~~w~I~p~~~~~~~~~~~a~~v~~~l~---~~~~f~~~i~~~-lda~~~G~s~~Ei~w~~~~g~~~~~~~~~r~~~~f 161 (528) T protein:vir:10 86 LGLDWTIEPPRNASAAEKADAEYLHELLL---DLEGIEDLMLDC-MDGVGHGYSAIELDWSLQGREWLPQAFDHRPQSWF 161 (528) T ss_pred hcCCceEecCCCCCHHHHHHHHHHHHHHh---CCccHHHHHHHH-HhhhhhcceeEEEEEeecCCceeEEEeeeecccce Confidence 99999998754432221 11112222222 112355555544 4566799999999987654 3567888888877 Q ss_pred EEEeccCcceEEEEeeccCCCCceeEEEeeeeeEEeecCCCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHccCCcce Q lcl|Aclame:pro 140 AIKRNSRTGRYEYYFQAGAGVGTQLVSFADDEVVPIRFFNPDGLERGLSLMESLKSTIFSEDSSRNATAAMWKNAGRPNL 219 (518) Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~p~g 219 (518) .+..+. +. .+.... +... ...+++...++.++....+..||.+.+..++..+.......++...|.+..|.|-- T Consensus 162 ~~~~~~--~~-~l~~~~-~~~~--g~~l~~~k~iv~~~~~~~g~p~g~gLlr~~~w~~~fK~~~~~~w~~f~E~yG~P~~ 235 (528) T protein:vir:10 162 QLNPDD--QD-ELRLRD-NSIA--GEVLQPFGWIMHKPRSRSGYVARSGLFRVLAWPYLFKHYSTADLAEMLEIYGLPIR 235 (528) T ss_pred eeccCC--Cc-EEeccC-CCCC--ceeecCCCeEEEeecCCCCCccccchHHHHHHHHHHHHhhHHHHHHHHHHcCCCeE Confidence 765432 22 222211 1122 24567777666677777788899999999999999999999999999999999999 Q ss_pred eeeeCCcCCHHHHHHHHHHHHHHhcCccccccceeccCCcccccccCCh-hhHHHHHHHHHHHHHHHHHhccchHhhccc Q lcl|Aclame:pro 220 VLRHEKRLSPEAQQRLREQFDRAHAGSSNTGKTMVVEEGMEPIPLQLTA-VEMQFIEARQLNREEVCGVYDIAPPIVHIL 298 (518) Q Consensus 220 il~~~~~~~~e~~~~~~~~~~~~~~g~~n~g~~~vl~~g~~~~~~~~~~-~d~q~~e~~~~~~~~Ia~~fgVpp~~lg~~ 298 (518) +.+++.+.++++++++.+.+.+..+. ..+|++.|++++-+..+. .-.-|.++.++..++|+.+. +-..+-... T Consensus 236 igky~~~a~~~ek~~L~~al~~i~~~-----~~~iiP~~~~ie~~ea~~~~~~~f~~li~~~d~~Isk~i-LGqtlTs~~ 309 (528) T protein:vir:10 236 LGKYPPGTPDEEKVTLLRAVTGLGHA-----AAGIIPESMSIDFQEASKGSAEPFMAMMRWCDDSMSKAI-LGGTLTSQT 309 (528) T ss_pred EEecCCCCCHHHHHHHHHHHHHHhhC-----cEEEecCCceeEEeecCCCChhHHHHHHHHHHHHHHHHH-hhhhhhccc Confidence 99999999999999999888876432 357788887776555322 22347888888889988875 222222111 Q ss_pred c---ccccccHHHHHHHHHHHHHHHHHHHHHHHHHhhhcchhhc---------cceeeechhhhhccCHHHHHHHHHHHH Q lcl|Aclame:pro 299 D---RATFSNISAQMRAFYRDTMAIPIARIQSAMDKYVGQYWVR---------KNRMKFDIDDVIQPDWEAKSESTQKMV 366 (518) Q Consensus 299 ~---~~~~s~~e~~~~~~~~~~l~P~~~~ie~~ln~~l~~~~~~---------~~~~~fd~~~l~~~d~~~~~~~~~~~~ 366 (518) . .++++-.+ -........+.-.++.|+..||+.|+...-. ..+.+|.+......|.+++++.+.+++ T Consensus 310 ~~g~~gS~Alg~-vh~~v~~di~~aDa~~i~~tln~~li~~l~~~N~~~~~~~~~~p~~~~~~~e~eDl~~~a~~~~~L~ 388 (528) T protein:vir:10 310 SESGGGAYALGQ-VHNEVRHDLLAADARQLAATLSRDLLWPLLVLNRSGNLDARRAPRLVFDLKDRADLAAMATSLPPLV 388 (528) T ss_pred cccccchhhhHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCccccceEEecCCCcccHHHHHHHHHHHH Confidence 1 12222222 2345567788889999999999887544311 112233344456778899999999999 Q ss_pred hCCC-cCHHHHHHHHhCCCCCCccCceeeecccccccccccccCCCCCCCCCCCCcccCCCCCccCCccccccccChhhh Q lcl|Aclame:pro 367 NSGV-ATPNEGREIMGLPRSDDPKADELYANSALQPLGATPDGAVEGEEAPAPKRPASTPVASLDQSPPASVPGLSPTNS 445 (518) Q Consensus 367 ~~g~-~T~NE~R~~~g~~pi~~~~gD~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 445 (518) ..|+ ++..++|+++|+|.-. .++.+..+....+.... .+ .+............+.....+..+. T Consensus 389 ~~G~~i~~~~i~e~~gip~p~--~~e~~~~~~~~~~~~~~---------~~---~~~~~~~~~~~~~~~~~~~~~~~d~- 453 (528) T protein:vir:10 389 KLGVQVPVNWVQEQLGIPLPA--NGEAVLGDQAGAGIAQL---------SR---RPGPRIAALAQVIGPRYRDQEALDQ- 453 (528) T ss_pred hCCCCCCHHHHHHHhCCCCCC--CCcccccCCCccccccc---------Cc---ccccccccccccccccccccchHHH- Confidence 9998 8999999999997654 34444322211110000 00 0000000000000000000000000 Q ss_pred cchhHHHHHHHHHHhhccCcchhHHHHHHHHHHHhhhhhhhcccccchhhhh----hhHHHHHHHHHHHHhhhcccC Q lcl|Aclame:pro 446 DRSTDSGKTEPRRLMQKPPPKESSPKHLRAVKGAMGRGKDIKGFALQLAEKY----PDDLEDILLAVQLALAERKDN 518 (518) Q Consensus 446 ~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~ 518 (518) ..+. ...+ ..........+.+.+++....+++....+..+.+ .++|++++ +-...+|.+.-- T Consensus 454 --~~~~---~~~~-----~~~~~~~~~l~~i~~~l~~~~s~ee~~~~L~~l~~~~d~~~l~~~l-~~a~~~A~l~G~ 519 (528) T protein:vir:10 454 --VLAS---LPAQ-----DMQNQADSLVAPLLDVISRGGSEAELLGALAEAFPDMDDSALADAL-HRLLFVADTWGR 519 (528) T ss_pred --HHHH---HHHH-----HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHhhcCCHHHHHHHH-HHHHHHHHHhhh Confidence 0000 0000 0001111222233333333333222222222221 11121111 111122222111 No 112 >protein:vir:79233 Length: 526 # NCBI annotation: portal protein # Family: family:all:313 # MgeID: mge:1867 # MgeName: Phage MP22 # Cross-refs: genbank:acc:YP_001469155;genbank:gi:157834998;genbank:GeneID:5648814 Probab=99.91 E-value=5.9e-23 Score=142.46 Aligned_cols=472 Identities=13% Similarity=0.098 Sum_probs=260.9 Q ss_pred CCCCCCCCCcc---ccccccchhhhhhhccCccCCcccCc---------------cchhhHHHHhhhHHHHHHHHHHHHh Q lcl|Aclame:pro 1 MLLANGQTLSA---PAMAELSPQMQDSYYYAPAVGMQLER---------------QFSLYGGIYKNQPWVRTVIAKRAQA 62 (518) Q Consensus 1 ~~f~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~v~~~v~~ia~~ 62 (518) =..|+...... ++.+.+ ..+...+...+..|..+.+ ...++.++..+.+.|.+|++.+... T Consensus 6 d~~g~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~gltp~~l~~il~~a~~gd~~~~~~L~edm~e~D~~i~s~l~~Rk~a 84 (526) T protein:vir:79 6 DVYGNPIRPQQLREPQTSRL-AGLAKEFAQHPAKGLTPAKLARILVEAEQGNLQAQAELFMDMEERDAHLFAEMSKRKRA 84 (526) T ss_pred CCCCCccCccccchhhhhhh-hhhhhhcccCCCCCcCHHHHHHHHHHhhCCCHHHHHHHHHHHHhhChHHHHHHHHHHHH Confidence 23444332221 111111 1233444444444432211 1223444445789999999999999 Q ss_pred hccCceEEEEecCCceeee-cchHHHHHhhccCccCCHHHHHHHHHHHHHHcCCeeEEeeeCCCC---ceeeeeeeCCcc Q lcl|Aclame:pro 63 LARLPVKCMFTSGDTETEE-HDTGYAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQKNKSG---TPEKLMPMHPSR 138 (518) Q Consensus 63 ia~lp~~v~~~~~~~~~~~-~~~~~~~l~~~PN~~~t~~~f~~~~~~~~ll~G~~~~~i~~~~~G---~~~~l~~l~p~~ 138 (518) |.+++|.|....++..... ....+..++ +....+.+++..++ +.+.+|-++.++++..+| .+..+.+.++.+ T Consensus 85 v~~~~w~I~p~~~~~~~~~~~a~~v~~~l---~~~~~~~~~i~~~l-dA~~~G~s~~Ei~w~~~~g~~~~~~l~~r~~~~ 160 (526) T protein:vir:79 85 ILGLDWAVEPPRNASAAEKADADYLHELL---LDLEGLEDLLLDAL-DGIGHGYSCIELEWALQGREWMPLAFHHRPQSW 160 (526) T ss_pred HhCCCceEecCCCCChHHHHHHHHHHHHH---hcccCHHHHHHHHH-hhhhhcceeEEEEEeecCCceeEEEeeeecccc Confidence 9999999987554432211 111222222 22224666666654 467799999999988754 366788888887 Q ss_pred eEEEeccCcceEEEEeeccCCCCceeEEEeeeeeEEeecCCCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHccCCcc Q lcl|Aclame:pro 139 VAIKRNSRTGRYEYYFQAGAGVGTQLVSFADDEVVPIRFFNPDGLERGLSLMESLKSTIFSEDSSRNATAAMWKNAGRPN 218 (518) Q Consensus 139 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~p~ 218 (518) +.+..+.. ..+.+. . +. .....+++...|..++....+..+|.+.+..++..+.......++...|.+.-|.|- T Consensus 161 F~~~~~~~-~~l~~~--~-~~--~~g~~l~~~k~iv~~~~~~~g~p~g~gLlr~~~w~~~fK~~~~~~w~~F~E~yG~P~ 234 (526) T protein:vir:79 161 FQLNPEDQ-NELRLR--D-NS--PAGEALQPFGWIIHRPRARSGYVARSGLFRVLAWPYLFRHYATSDLAEMLEIYGLPI 234 (526) T ss_pred eEeccCCC-cEEEec--C-CC--CCceeecCCceEEEeecCCcCCccccchHHHHHHHHHHHHhhHHHHHHHHHHcCCce Confidence 77654332 222221 1 11 222457777666667777778889999999999999999999999999999999999 Q ss_pred eeeeeCCcCCHHHHHHHHHHHHHHhcCccccccceeccCCcccccccCC-hhhHHHHHHHHHHHHHHHHHhccchHhhcc Q lcl|Aclame:pro 219 LVLRHEKRLSPEAQQRLREQFDRAHAGSSNTGKTMVVEEGMEPIPLQLT-AVEMQFIEARQLNREEVCGVYDIAPPIVHI 297 (518) Q Consensus 219 gil~~~~~~~~e~~~~~~~~~~~~~~g~~n~g~~~vl~~g~~~~~~~~~-~~d~q~~e~~~~~~~~Ia~~fgVpp~~lg~ 297 (518) -+.+++...++++++++.+.+.+..+. ..+|++.|++++-+..+ .....|.+..++..++|+.+. +-..+-.. T Consensus 235 ~igky~~~a~~~ek~~L~~av~~i~~d-----a~~iiP~~~~ie~~ea~~~~~~~f~~li~~~d~~Isk~i-LGqtlTs~ 308 (526) T protein:vir:79 235 RLGKYPPGTADEEKATLLRAVTGLGHA-----AAGIIPETMAIDFQQAAQGSSEPFLAMMRQSEDAISKAV-LGGTLTST 308 (526) T ss_pred EEEecCCCCCHHHHHHHHHHHHHHhcC-----cEEEecCCceeEEeecCCCCHHHHHHHHHHHHHHHHHHH-hhhhhccc Confidence 999999999999999999888886432 35888888877665532 223457888888899998874 22222111 Q ss_pred ---ccccccccHHHHHHHHHHHHHHHHHHHHHHHHHhhhcchhhcc---------ceeeechhhhhccCHHHHHHHHHHH Q lcl|Aclame:pro 298 ---LDRATFSNISAQMRAFYRDTMAIPIARIQSAMDKYVGQYWVRK---------NRMKFDIDDVIQPDWEAKSESTQKM 365 (518) Q Consensus 298 ---~~~~~~s~~e~~~~~~~~~~l~P~~~~ie~~ln~~l~~~~~~~---------~~~~fd~~~l~~~d~~~~~~~~~~~ 365 (518) ...++++..+. ........+.-.++.|+..||+.|+...-.- .+.+|.+......|.+++++.+.++ T Consensus 309 ~~~g~~gS~a~g~v-h~~v~~di~~aDa~~i~~tln~~Li~~l~~~N~~~~~~~~~~p~~~~~~~e~eDl~~~a~~~~~L 387 (526) T protein:vir:79 309 TSQSGGGAFALGQV-HNEVRHDILASDARQLAATLSRDLLWPLLVLNRPGSPDVRRAPRLVFDLREQADITSMAQSIPAL 387 (526) T ss_pred cccCcchhhhhHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcCCccccceEEeCCCCcccHHHHHHHHHHH Confidence 11223333222 3455667788899999999998876543211 1223333445678899999999999 Q ss_pred HhCCC-cCHHHHHHHHhCCCCCCccCceeeecccccccccccccCCCCCCCCCCCCcccCCCCCccCCccccccccChhh Q lcl|Aclame:pro 366 VNSGV-ATPNEGREIMGLPRSDDPKADELYANSALQPLGATPDGAVEGEEAPAPKRPASTPVASLDQSPPASVPGLSPTN 444 (518) Q Consensus 366 ~~~g~-~T~NE~R~~~g~~pi~~~~gD~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 444 (518) +..|+ ++..++|+++|+|... .++.++.|.. ... .. ...+........... .. .. ...+. T Consensus 388 ~~~G~~i~~~~i~e~~gip~~~--~~e~~l~~~~-----~~~---~~---~~~~~~~~~~~~~~~-~~---~~--~~~~~ 448 (526) T protein:vir:79 388 VNVGLEIPSAWVYDKLGIPQPA--KNEPVLRPAA-----QPA---IL---SRQHGQRVAALATIV-GP---RY--GDQQA 448 (526) T ss_pred HhCCCcCCHHHHHHHhCCCCCC--CchhhccccC-----Ccc---cc---ccccccccccccccc-cc---cC--chhhH Confidence 99997 8889999999996543 2333322211 000 00 000000000000000 00 00 00000 Q ss_pred hcchhHHHHHHHHHHhhccCcchhHHHHHHHHHHHhhhhhhhcccccchhhhh----hhHHHHHHHHHHHHhhhcccC Q lcl|Aclame:pro 445 SDRSTDSGKTEPRRLMQKPPPKESSPKHLRAVKGAMGRGKDIKGFALQLAEKY----PDDLEDILLAVQLALAERKDN 518 (518) Q Consensus 445 ~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~ 518 (518) -++..+.. ... ...+......+.+.+++...++++....+..+.+ .++|++++ +-...+|.+.-- T Consensus 449 ~d~~l~~~---~~~-----~~~~~~~~~~~~i~~~~~~~~s~ee~~~~L~~l~~~ld~~~l~~~l-~~a~~~A~l~Gr 517 (526) T protein:vir:79 449 LDKALADL---PAK-----DMQNQANDLLAPLLDAVNRGDSETELLGALAEAFPDMDDSALTDAL-HRLLFAADTWGR 517 (526) T ss_pred HHHHHHHH---HHH-----HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHhccCCHHHHHHHH-HHHHHHHHHhhh Confidence 00000000 000 0111222333444445544443333222222222 12222211 111122222211 No 113 >protein:vir:79538 Length: 502 # NCBI annotation: putative portal protein # Family: family:all:47 # MgeID: mge:1871 # MgeName: cdtI # Cross-refs: genbank:acc:YP_001272517;genbank:gi:148609386;genbank:GeneID:5204374 Probab=99.89 E-value=7.3e-25 Score=152.91 Aligned_cols=419 Identities=10% Similarity=0.006 Sum_probs=241.2 Q ss_pred CCCCCC---------------CCCccccccccchhhhhhhccCccCCcccCccchhhHHHHhhhHHHHHHHHHHHHhhcc Q lcl|Aclame:pro 1 MLLANG---------------QTLSAPAMAELSPQMQDSYYYAPAVGMQLERQFSLYGGIYKNQPWVRTVIAKRAQALAR 65 (518) Q Consensus 1 ~~f~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~v~~ia~~ia~ 65 (518) -.|..+ .+... .. ...|.....+.............+..++++.+|+++..+|+.+...+.+ T Consensus 9 ~~~sP~~~~~R~~ar~~~~~y~aa~~-~r--~~~~~~~~~s~~~~~~~~~~~lr~RaRdl~rNn~~a~~av~~~~~nvVG 85 (502) T protein:vir:79 9 GVFSPGWKAARLRSRAVIQAYEAVKT-TR--THKARRENRTADQLSQYGAVSLREQARYLDNNHDLVIGVFDKLEERVVG 85 (502) T ss_pred hhcChHHHHHHHhhHHHHhhccccCc-cc--ccCCCCCCCChHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHhhcc Confidence 111111 11100 00 0000000000000000011122344578999999999999988888875 Q ss_pred C-ceEEEEec--CCcee-eecchHHHHHh----hc--cCccCCHHHHHHHHHHHHHHcCCeeEEeeeCCCC-------ce Q lcl|Aclame:pro 66 L-PVKCMFTS--GDTET-EEHDTGYAKLL----AD--PCEYLDPFAFWEWVASTLDIYGETYLAIQKNKSG-------TP 128 (518) Q Consensus 66 l-p~~v~~~~--~~~~~-~~~~~~~~~l~----~~--PN~~~t~~~f~~~~~~~~ll~G~~~~~i~~~~~G-------~~ 128 (518) - .+.+..+- .+... +.-...+..++ .. .+..++++.+...++..++..|++|+.+++...+ .+ T Consensus 86 ~ggi~~~~~~~~~~~~~~~~~~~~ie~~w~~Wa~~~D~~g~~~f~~~q~l~~r~~~~dGE~f~~~~~~~~~~~~~g~~~~ 165 (502) T protein:vir:79 86 KNGIIVEPHPVLRNGAIARDLAAEIRTRWSEWSVSPEVTGQFTRPMLERLMLRTWLRDGEVFAQMVSGRINSLTPSAGVH 165 (502) T ss_pred CCceeeeeccCCCChhHHHHHHHHHHHHHHHhhcCcCccccCCHHHHHHHHHHHHHhCCceEEEEeecccCccCCCcccc Confidence 4 44443221 11100 00111111222 22 2335789999999999999999999998765432 35 Q ss_pred eeeeeeCCcceE------------EEeccCcceEEEEeeccCCC---CceeEEEeeeeeEEeecCCCCcccccchHHHHH Q lcl|Aclame:pro 129 EKLMPMHPSRVA------------IKRNSRTGRYEYYFQAGAGV---GTQLVSFADDEVVPIRFFNPDGLERGLSLMESL 193 (518) Q Consensus 129 ~~l~~l~p~~v~------------~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~ 193 (518) ..|..++|+++. |..|..|..+.|++....+. ......+++++|||+..+...++.+|+|++..+ T Consensus 166 l~lq~iepd~l~~~~~~~~~i~~GVe~d~~Gr~~aY~i~~~hPgd~~~~~~~rvpA~~vlH~f~~~r~gQ~RGis~lapv 245 (502) T protein:vir:79 166 FWLEALEPDFIPMTSDESNRLNQGVFVDDWGRPEKYLVYKSRPVSGRQMETKEVDAERMLHLKFVRRLHQMRGTSLLSGV 245 (502) T ss_pred eEEEEecchhcCCCCCCCCeeEeeeEECCCCceEEEEEeecCCCCCcccceeEechhheEEeecccCCccccCCchHHHH Confidence 688999998875 55667777888887654332 244577999999999999888999999999999 Q ss_pred HHHHHHHHHHHHHHHHHHHccCCcceeeeeCCcCCHHHHHHHHHHHHHHhcCccccccc-eeccCCcccccccCChhhHH Q lcl|Aclame:pro 194 KSTIFSEDSSRNATAAMWKNAGRPNLVLRHEKRLSPEAQQRLREQFDRAHAGSSNTGKT-MVVEEGMEPIPLQLTAVEMQ 272 (518) Q Consensus 194 ~~~i~~~~~~~~~~~~~~~ng~~p~gil~~~~~~~~e~~~~~~~~~~~~~~g~~n~g~~-~vl~~g~~~~~~~~~~~d~q 272 (518) ...+.......+....-.+-.+...++|+.+.+.+..... .-..-..... .-..|.+ ..|..|.+++....+..... T Consensus 246 l~~l~~l~~~~dael~~a~i~A~~~~fi~~~~~~~~~~~~-~~~~~~~~~~-~l~pG~i~~~L~pGe~i~~~~p~~p~~~ 323 (502) T protein:vir:79 246 LIRLSALKEYEDSELTAARIAAALGMYIRKGDGQSYEPDG-NGSKENEREL-TIQPGIIYDDLKPGEEIGMVKSDRPNPN 323 (502) T ss_pred HHHHHHHhHHHHHHHHHHHHhhhheeeeecCCCccccccc-CCCCCccccc-cccCCccccccCCCceeeeeCCCCCCCC Confidence 9999999999988888888888899998875432111000 0000000001 1134554 45889999888877666778 Q ss_pred HHHHHHHHHHHHHHHhccchHhhccccccccccHHHHHHHH-----------HHHHHHHHHHH-HHHHHHhhhcch--h- Q lcl|Aclame:pro 273 FIEARQLNREEVCGVYDIAPPIVHILDRATFSNISAQMRAF-----------YRDTMAIPIAR-IQSAMDKYVGQY--W- 337 (518) Q Consensus 273 ~~e~~~~~~~~Ia~~fgVpp~~lg~~~~~~~s~~e~~~~~~-----------~~~~l~P~~~~-ie~~ln~~l~~~--~- 337 (518) |.++.+...+.||+.+|||.+.+..--+.|||+.......| ...-++|+... +++++-...++. . T Consensus 324 ~~~f~~~~lr~iaaglGi~ye~lt~D~s~nySs~R~~~~e~~r~~~~~q~~~~~~~~~pi~~~~l~~a~l~G~i~~p~~~ 403 (502) T protein:vir:79 324 LETFRNGQLRAVAAGSRLSFSSTARNYNGTYSAQRQELVESTDGYLILQDWFIGAVTRPMYRAWLKQAVASGVIRLPRDL 403 (502) T ss_pred HHHHHHHHHHHHHhhcCCCHHHHhccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCC Confidence 99999999999999999998766432345888876554443 33444554433 344443333321 1 Q ss_pred hcc--ceeeechhhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHHhCCCCCCccCce----------eeecccccccccc Q lcl|Aclame:pro 338 VRK--NRMKFDIDDVIQPDWEAKSESTQKMVNSGVATPNEGREIMGLPRSDDPKADE----------LYANSALQPLGAT 405 (518) Q Consensus 338 ~~~--~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~T~NE~R~~~g~~pi~~~~gD~----------~~~~~n~~~~~~~ 405 (518) .+. ..++|-.-.....|+.+.++....++++|+.|.-++-.+.|.++-+ .-++ +-++....|.... T Consensus 404 ~~~~~~~~~W~~p~~~~iDP~Ke~~a~~~~i~~Gl~t~~~~~a~~G~D~~~--v~~q~a~e~~~~~~~Gl~~~~~~~~~~ 481 (502) T protein:vir:79 404 DRSSLYTAVYSGPVMPWIDPVKEAEAWKIQIRGGAATESDWVRAGGRNPDD--VKRRRKAEIDENRKLDLVFDTDPASDK 481 (502) T ss_pred CchhhcceeeecCCccccChHHHHHHHHHHHHcCCCCHHHHHHHcCCCHHH--HHHHHHHHHHHHHHcCCCCCCCCCCCC Confidence 111 1223333455678999999999999999999999998888988742 1111 1111111110000 Q ss_pred cccCCCCCCCCCCCCcccCCCCCccCCcccccccc Q lcl|Aclame:pro 406 PDGAVEGEEAPAPKRPASTPVASLDQSPPASVPGL 440 (518) Q Consensus 406 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 440 (518) . ......+..++.++ .+..++ T Consensus 482 ~----~~~~~~~~~e~~~~----------~~~~e~ 502 (502) T protein:vir:79 482 G----GSSAATKRQEPQHT----------DDQSEE 502 (502) T ss_pred C----CCCCCCCCCCCCCC----------CCCCCC Confidence 0 00000000000000 000000 No 114 >protein:vir:389 Length: 530 # NCBI annotation: gp4 # Family: family:all:47 # MgeID: mge:325 # MgeName: N15 # Cross-refs: genbank:acc:NP_046899;genbank:gi:9630468;genbank:GeneID:1261643 Probab=99.89 E-value=1.8e-24 Score=150.77 Aligned_cols=424 Identities=11% Similarity=0.040 Sum_probs=244.9 Q ss_pred CCCCCCCCCccccccccchhhhhhhccCc----cCCc-------------ccCccchhhHHHHhhhHHHHHHHHHHHHhh Q lcl|Aclame:pro 1 MLLANGQTLSAPAMAELSPQMQDSYYYAP----AVGM-------------QLERQFSLYGGIYKNQPWVRTVIAKRAQAL 63 (518) Q Consensus 1 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~-------------~~~~~~~~~~~~~~~~~~v~~~v~~ia~~i 63 (518) -++|..... ....+..-..++.. ..++ ......+..++++.+|+.+..||+.+...| T Consensus 5 ~~~~~~~~~------~~~~~~~~~~~a~~~~~~~~~w~~~~~s~~~~i~~~~~~lr~RaRdl~rNn~~a~~av~~~~~nv 78 (530) T protein:vir:38 5 SLVGPDGKT------SLREYAGYHGGGGGFGGQLRGWNPPSESADAALLPNYSRGNARADDLVRNNGYAANAVQLHQDHI 78 (530) T ss_pred eeecCcccc------chHHHhhhhcccCCCCCcccccccCCCCHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHh Confidence 222211100 00000000000000 0010 111223446788999999999999999999 Q ss_pred ccCceEEEEecC------Ccee--eecc---hHHHHHhhccC------ccCCHHHHHHHHHHHHHHcCCeeEEeeeCCC- Q lcl|Aclame:pro 64 ARLPVKCMFTSG------DTET--EEHD---TGYAKLLADPC------EYLDPFAFWEWVASTLDIYGETYLAIQKNKS- 125 (518) Q Consensus 64 a~lp~~v~~~~~------~~~~--~~~~---~~~~~l~~~PN------~~~t~~~f~~~~~~~~ll~G~~~~~i~~~~~- 125 (518) -+-.+.+..+-+ ++.. +... .....+...|+ ..+|++++.+.++..++..|++|+.+++... T Consensus 79 VG~Gi~~~~~p~~~~l~~~~~~~~~~~~~ie~~w~~W~~~~~~~~D~~g~~~f~~~q~l~~r~~~~dGE~~~~~~~~~~~ 158 (530) T protein:vir:38 79 VGSFFRLSYRPSWRYLGINEEDSRAFSRDVEAAWNEYAEDDFCGIDAERKRTFTMMIREGVAMHAFNGELCVQATWDSDS 158 (530) T ss_pred hCCCceeeeccchhhcCCCHhHHHHHHHHHHHHHHHhhcCCCcEEeeeccCCHHHHHHHHHHHHhhCCceEEEeeeccCC Confidence 887887764321 1111 1111 11222333443 3579999999999999999999999887644 Q ss_pred Cc--eeeeeeeCCcceE--------------EEeccCcceEEEEeeccCCCC---c------eeEEEeeeeeEEeecCCC Q lcl|Aclame:pro 126 GT--PEKLMPMHPSRVA--------------IKRNSRTGRYEYYFQAGAGVG---T------QLVSFADDEVVPIRFFNP 180 (518) Q Consensus 126 G~--~~~l~~l~p~~v~--------------~~~~~~~~~~~~~~~~~~~~~---~------~~~~~~~~~vih~~~~~~ 180 (518) |. +..|..|+|++|. |..+..|..+.|++......+ . ....++.++|||+..... T Consensus 159 g~~~~~~lq~ie~d~l~~~~~~~~~~~i~~GIe~d~~Gr~~aY~i~~~~~~~~~~~~~~~~~~~~~v~a~~vlH~f~~~r 238 (530) T protein:vir:38 159 TRLFRTQFKMVSPKRVSNPNNIGDTRNCRAGVKINDSGAALGYYVSDDGYPGWMAQNWTYIPRELPGGRPSFIHVFEPME 238 (530) T ss_pred CCccceEEEEechhhcCCCCCCCCCCeeEeeeEECCCCceEEEEEeeccCCCccccccceeeeeeccChhHeEeeccccC Confidence 32 4678888887764 344556667777775432211 1 123356679999999988 Q ss_pred CcccccchHHHHHHHHHHHHHHHHHHHHHHHHccCCcceeeeeCCcCC-----------HHHHHHHHHHHHHH---hc-- Q lcl|Aclame:pro 181 DGLERGLSLMESLKSTIFSEDSSRNATAAMWKNAGRPNLVLRHEKRLS-----------PEAQQRLREQFDRA---HA-- 244 (518) Q Consensus 181 ~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~p~gil~~~~~~~-----------~e~~~~~~~~~~~~---~~-- 244 (518) .++.+|+|++..+...+.......+....-.+-.+...++|+.+.+.. +++...+....... +. T Consensus 239 ~gQ~RGis~lapvl~~l~~l~~y~dael~~a~i~A~~a~fi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (530) T protein:vir:38 239 DGQTRGANAFYSVMEQMKMLDTLQNTQLQSAIVKAMYAATIESELDTQSAMDFILGADNKEQQSKLTGWLGEMAAYYSAA 318 (530) T ss_pred CCcccCCchHHHHHHHHHHHhHHHHHHHHHHHHhhhheeeeeccCCccccccccccCCcccccccccccchhhhhccccc Confidence 899999999999999999999999888888888888888887654311 11111111111110 00 Q ss_pred -CccccccceeccCCcccccccCChhhHHHHHHHHHHHHHHHHHhccchHhh-ccccccccccHHHHHHHHH-------- Q lcl|Aclame:pro 245 -GSSNTGKTMVVEEGMEPIPLQLTAVEMQFIEARQLNREEVCGVYDIAPPIV-HILDRATFSNISAQMRAFY-------- 314 (518) Q Consensus 245 -g~~n~g~~~vl~~g~~~~~~~~~~~d~q~~e~~~~~~~~Ia~~fgVpp~~l-g~~~~~~~s~~e~~~~~~~-------- 314 (518) -.-..|.+..|..|.+++.+..+-....|.++.+.+.+.||+.+|||.+.| |+.+..|||+..+....|. T Consensus 319 ~~~l~pG~i~~L~pGe~i~~~~p~~p~~~~~~f~~~~lr~iaaglGi~ye~lt~D~s~~nYSS~R~~~~e~~r~~~~~q~ 398 (530) T protein:vir:38 319 PVRLGGARVPHLLPGDSLNLQSAQDTDNGYSTFEQSLLRYIAAGLGVSYEQLSRNYSQMSYSTARASANESWAYFMGRRK 398 (530) T ss_pred ceeccCceeeecCCCCeeeeeCCCCCCCCHHHHHHHHHHHHHhhcCCCHHHHhcccccccHHHHHHHHHHHHHHHHHHHH Confidence 012467788899999998888776678899999999999999999999866 7777888987765544333 Q ss_pred ---HHHHHHHHHH-HHHHHHhhhcchhh---------cc--ceeeechhhhhccCHHHHHHHHHHHHhCCCcCHHHHHHH Q lcl|Aclame:pro 315 ---RDTMAIPIAR-IQSAMDKYVGQYWV---------RK--NRMKFDIDDVIQPDWEAKSESTQKMVNSGVATPNEGREI 379 (518) Q Consensus 315 ---~~~l~P~~~~-ie~~ln~~l~~~~~---------~~--~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~T~NE~R~~ 379 (518) ..-++|+... +++++....++... +. ..+++-.-.....|+.+.++....++++|+.|.-++-.+ T Consensus 399 ~~~~~~~~pi~~~wl~~av~~G~i~~p~~~~~~~~~~~~a~~~~~w~~p~~~~iDP~Ke~~a~~~~i~~G~~s~~~~~a~ 478 (530) T protein:vir:38 399 FVASRQACQMFLCWLEEAIVRRVVTLPSKARFSFQEARTAWGNANWIGSGRMAIDGLKEVQEAVMLIEAGLSTYEKECAK 478 (530) T ss_pred HHHHHHhhHHHHHHHHHHHHcCCccCCCCCCCCchhhHHhhhceeeecCCccccChHHHHHHHHHHHHcCCCCHHHHHHH Confidence 3333444333 44445444332110 00 122333345567799999999999999999999999888 Q ss_pred HhCCCCCCccCceeeeccc-ccccccccccCCCCCCCCCCCCcccCCCCCccCCccc Q lcl|Aclame:pro 380 MGLPRSDDPKADELYANSA-LQPLGATPDGAVEGEEAPAPKRPASTPVASLDQSPPA 435 (518) Q Consensus 380 ~g~~pi~~~~gD~~~~~~n-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 435 (518) .|.++-+ .-+++-.-.. +..++-....... ..+..+.+..+ ..+++...++ T Consensus 479 ~G~D~~~--v~~q~a~e~~~~~~~Gl~~~~~~~--~~~~~~~~~~~-~~~~d~~~~a 530 (530) T protein:vir:38 479 RGDDYQE--IFAQQVRESMERRAAGLNPPAWAA--AAFEAGVKKSN-EEEQDGARAA 530 (530) T ss_pred cCCCHHH--HHHHHHHHHHHHHHcCCCCCCCcc--cccCCCCCCCC-CCCCCCCCCC Confidence 8987742 1111100000 0000000000000 00000000000 0000000000 No 115 >protein:vir:3420 Length: 533 # NCBI annotation: capsid component # Family: family:all:47 # MgeID: mge:70 # MgeName: lambda # Cross-refs: genbank:acc:NP_040583;genbank:gi:9626247;genbank:GeneID:2703526 Probab=99.89 E-value=2.3e-24 Score=150.21 Aligned_cols=431 Identities=11% Similarity=0.042 Sum_probs=243.4 Q ss_pred CCCCCCCCCccccccccchhhhhhhccCcc-----CC-------------cccCccchhhHHHHhhhHHHHHHHHHHHHh Q lcl|Aclame:pro 1 MLLANGQTLSAPAMAELSPQMQDSYYYAPA-----VG-------------MQLERQFSLYGGIYKNQPWVRTVIAKRAQA 62 (518) Q Consensus 1 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~-------------~~~~~~~~~~~~~~~~~~~v~~~v~~ia~~ 62 (518) |=.=.-.....+........+..-..+... .+ .......+..++++.+|+.+..+|+.+... T Consensus 1 ~~~p~~~~~~~~~~~~~~~~~~~y~~~a~~~~~~~~~w~p~~~s~~~~~~~~~~~lr~RaRdl~rNn~~a~~av~~~~~n 80 (533) T protein:vir:34 1 MKTPTIPTLLGPDGMTSLREYAGYHGGGSGFGGQLRSWNPPSESVDAALLPNFTRGNARADDLVRNNGYAANAIQLHQDH 80 (533) T ss_pred CCCchhhhhhcccccchHHHHHhhhhccCCCCCcccccccCCCCHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHH Confidence 100000000000000000000000100000 00 011112344578899999999999999999 Q ss_pred hccCceEEEEecC------Cc--eeeecc---hHHHHHhhccC------ccCCHHHHHHHHHHHHHHcCCeeEEeeeCCC Q lcl|Aclame:pro 63 LARLPVKCMFTSG------DT--ETEEHD---TGYAKLLADPC------EYLDPFAFWEWVASTLDIYGETYLAIQKNKS 125 (518) Q Consensus 63 ia~lp~~v~~~~~------~~--~~~~~~---~~~~~l~~~PN------~~~t~~~f~~~~~~~~ll~G~~~~~i~~~~~ 125 (518) |-+-.+.+..+-+ ++ ..+... .....+.+.++ ..++++++...++..++..|++|+.+.+... T Consensus 81 vVG~Gi~~~~~p~~~~lg~~~~~~~~~~~~ie~~w~~w~~~~~~~~D~~g~~~f~~~q~l~~r~~~~dGE~f~~~~~~~~ 160 (533) T protein:vir:34 81 IVGSFFRLSHRPSWRYLGIGEEEARAFSREVEAAWKEFAEDDCCCIDVERKRTFTMMIREGVAMHAFNGELFVQATWDTS 160 (533) T ss_pred hhCCCceeeeccchhhcCCChhHHHHHHHHHHHHHHHhhcCccceeccccccCHHHHHHHHHHHHHhCCceEEEeeeccC Confidence 9777777754321 11 111111 11222333433 3468999999999999999999999876654 Q ss_pred -Cc--eeeeeeeCCcceE--------------EEeccCcceEEEEeeccCCCCc---------eeEEEeeeeeEEeecCC Q lcl|Aclame:pro 126 -GT--PEKLMPMHPSRVA--------------IKRNSRTGRYEYYFQAGAGVGT---------QLVSFADDEVVPIRFFN 179 (518) Q Consensus 126 -G~--~~~l~~l~p~~v~--------------~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~vih~~~~~ 179 (518) |. +..|..++|+++. |..+..|..+.|++......+. ....++..+|||+..+. T Consensus 161 ~g~~~~~~lq~ie~d~l~~~~~~~~~~~i~~GIe~d~~Gr~~aY~i~~~~~~~~~~~~~~~~~~~~~v~a~~VlH~f~~~ 240 (533) T protein:vir:34 161 SSRLFRTQFRMVSPKRISNPNNTGDSRNCRAGVQINDSGAALGYYVSEDGYPGWMPQKWTWIPRELPGGRASFIHVFEPV 240 (533) T ss_pred CCCccceEEEEechhhcCCCCCCCCCCceEeeeEECCCCCeEEEEEeecCCCCccccccceeeeeeccChhHeeeecccc Confidence 32 4577778776664 3345556667777754332211 12335678999999998 Q ss_pred CCcccccchHHHHHHHHHHHHHHHHHHHHHHHHccCCcceeeeeCCcCC-----------HHHHHHHHH---HHHHHhcC Q lcl|Aclame:pro 180 PDGLERGLSLMESLKSTIFSEDSSRNATAAMWKNAGRPNLVLRHEKRLS-----------PEAQQRLRE---QFDRAHAG 245 (518) Q Consensus 180 ~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~p~gil~~~~~~~-----------~e~~~~~~~---~~~~~~~g 245 (518) ..++.+|+|++..+...+.......+....-.+-.+...++|+.+.+.. .+..+.+.. .-...+.+ T Consensus 241 r~gQ~RGis~lapvl~~l~~l~~y~dael~~a~i~A~~a~fi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (533) T protein:vir:34 241 EDGQTRGANVFYSVMEQMKMLDTLQNTQLQSAIVKAMYAATIESELDTQSAMDFILGANSQEQRERLTGWIGEIAAYYAA 320 (533) T ss_pred CCCcccCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhheeeeecCCCcccccccccCCCcccccccccccchhhhhccCc Confidence 8899999999999999999999999988888888888888888653211 111111111 11111111 Q ss_pred ---ccccccceeccCCcccccccCChhhHHHHHHHHHHHHHHHHHhccchHhh-ccccccccccHHHHHHH--------- Q lcl|Aclame:pro 246 ---SSNTGKTMVVEEGMEPIPLQLTAVEMQFIEARQLNREEVCGVYDIAPPIV-HILDRATFSNISAQMRA--------- 312 (518) Q Consensus 246 ---~~n~g~~~vl~~g~~~~~~~~~~~d~q~~e~~~~~~~~Ia~~fgVpp~~l-g~~~~~~~s~~e~~~~~--------- 312 (518) .-+.|.+..|..|.+++.+..+-....|.++.+.+.+.||+.+|||.+.| |+.++.|||+..+.... T Consensus 321 ~~~~l~pG~i~~L~pGe~i~~~~~~~p~~~~~~f~~~~lr~iAaglGi~ye~lt~D~s~~nYSS~R~~~~e~~r~~~~~q 400 (533) T protein:vir:34 321 APVRLGGAKVPHLMPGDSLNLQTAQDTDNGYSVFEQSLLRYIAAGLGVSYEQLSRNYAQMSYSTARASANESWAYFMGRR 400 (533) T ss_pred ceeeccCceeeecCCCCeeeecCCCCCCCCHHHHHHHHHHHHHhhcCCCHHHHhhhcccccHHHHHHHHHHHHHHHHHHH Confidence 12457788899999998888776778899999999999999999998765 66778899887554433 Q ss_pred --HHHHHHHHHHHH-HHHHHHhhhcchhh---------cc--ceeeechhhhhccCHHHHHHHHHHHHhCCCcCHHHHHH Q lcl|Aclame:pro 313 --FYRDTMAIPIAR-IQSAMDKYVGQYWV---------RK--NRMKFDIDDVIQPDWEAKSESTQKMVNSGVATPNEGRE 378 (518) Q Consensus 313 --~~~~~l~P~~~~-ie~~ln~~l~~~~~---------~~--~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~T~NE~R~ 378 (518) |....++|+... +++++-...++... +. ..+.|-.-.....|+.+.++....++++|+.|.-|+-. T Consensus 401 ~~~~~~~~~pi~~~wl~~ail~G~i~~p~~~~~~~~~~~~~~~~~~w~~p~~~~iDP~Ke~~a~~~~i~~G~~s~~~~~a 480 (533) T protein:vir:34 401 KFVASRQASQMFLCWLEEAIVRRVVTLPSKARFSFQEARSAWGNCDWIGSGRMAIDGLKEVQEAVMLIEAGLSTYEKECA 480 (533) T ss_pred HHHHHHHHHHHHHHHHHHHHHcCcccCCCccCCCchhhHHhhhceeeccCCccccChHHHHHHHHHHHHcCCCCHHHHHH Confidence 334444554443 34444433332100 01 12344444567789999999999999999999999988 Q ss_pred HHhCCCCCCccCceeeecccccccccccccCCCCCCCCCCCCcccCCCCCccCCccccccccChhhh Q lcl|Aclame:pro 379 IMGLPRSDDPKADELYANSALQPLGATPDGAVEGEEAPAPKRPASTPVASLDQSPPASVPGLSPTNS 445 (518) Q Consensus 379 ~~g~~pi~~~~gD~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 445 (518) +.|.++-+ .-+++-.-... +... +-........... +..+..+ +++.++. +.+ T Consensus 481 ~~G~D~~e--v~~q~a~e~~~--~~~~--gl~~~~~~~~~~~-s~~~~~~--~~~~~~~-----~~~ 533 (533) T protein:vir:34 481 KRGDDYQE--IFAQQVRETME--RRAA--GLKPPAWAAAAFE-SGLRQST--EEEKSDS-----RAA 533 (533) T ss_pred HcCCCHHH--HHHHHHHHHHH--HHhc--CCCCCCCCCcCcc-CCCCCCC--CCCcccC-----CCC Confidence 88987743 11111000000 0000 0000000000000 0000000 0000000 000 No 116 >protein:vir:6382 Length: 553 # NCBI annotation: portal protein Lambda B # Family: family:all:47 # MgeID: mge:133 # MgeName: BcepNazgul # Cross-refs: genbank:acc:NP_918995;genbank:gi:34610170;genbank:GeneID:2559575 Probab=99.88 E-value=3.1e-24 Score=149.45 Aligned_cols=428 Identities=11% Similarity=0.016 Sum_probs=244.9 Q ss_pred CCCCCCCCCc--cccccccchhh-hhhhccCcc-----CCcc-------------cCccchhhHHHHhhhHHHHHHHHHH Q lcl|Aclame:pro 1 MLLANGQTLS--APAMAELSPQM-QDSYYYAPA-----VGMQ-------------LERQFSLYGGIYKNQPWVRTVIAKR 59 (518) Q Consensus 1 ~~f~~~~~~~--~~~~~~~~~~~-~~~~~~~~~-----~~~~-------------~~~~~~~~~~~~~~~~~v~~~v~~i 59 (518) |+=....... ++..+...... ...+.+... .++. .....+..++++.+|+++..+|+.+ T Consensus 1 m~~~~~r~~~~~a~~~~~~~~~~~~~~y~gA~~~~r~~~~w~~~~~s~~~~~~~~~~~lr~RaRdL~rNn~~a~~av~~~ 80 (553) T protein:vir:63 1 MTKVTVRKLSEVTSGRPEQSASLGGGGLEGASRLSRETVSWNPSLRSPDALINPLKRIADARGRDMADNDGFTNGAVGYQ 80 (553) T ss_pred CcchhhhhhcccccccchhhhhhhcccccccccCCCcccccccCCCChHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHH Confidence 2211111111 11111101100 001111100 0100 1112344578899999999999999 Q ss_pred HHhhccCceEEEEecC-------Cceeee-cchH----HHHHhhccC------ccCCHHHHHHHHHHHHHHcCCeeEEee Q lcl|Aclame:pro 60 AQALARLPVKCMFTSG-------DTETEE-HDTG----YAKLLADPC------EYLDPFAFWEWVASTLDIYGETYLAIQ 121 (518) Q Consensus 60 a~~ia~lp~~v~~~~~-------~~~~~~-~~~~----~~~l~~~PN------~~~t~~~f~~~~~~~~ll~G~~~~~i~ 121 (518) ...|.+-.+.+..+-+ ++.... -... ...+.+.++ ..++++.+...++..++..|++|+.++ T Consensus 81 ~~nvVG~Gi~~~~~~~~~~l~g~~~~~~~~~~~~ie~~w~~wa~~~~~~~D~~g~~~f~~~q~l~~r~~~~dGE~~~~~~ 160 (553) T protein:vir:63 81 RDSIVGAQYRLNSMPDINVIPGATEEWAEEYQTIVEAKFELYAESLACYIDNAAISTFTGLIRLGVVGYVKTGEVLATAE 160 (553) T ss_pred HHhhccCCceeeeccchhhhcCCCHHHHHHHHHHHHHHHHHhcCCccceeeccccCCHHHHHHHHHHHHHhCCceEEEee Confidence 9998887777754321 110000 0111 122333333 356899999999999999999999887 Q ss_pred eCCC-Cc--eeeeeeeCCcceE--------------EEeccCcceEEEEeeccCCCCc--------------eeEEEeee Q lcl|Aclame:pro 122 KNKS-GT--PEKLMPMHPSRVA--------------IKRNSRTGRYEYYFQAGAGVGT--------------QLVSFADD 170 (518) Q Consensus 122 ~~~~-G~--~~~l~~l~p~~v~--------------~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~ 170 (518) +... |. +..|..|+|+++. |..|..|..+.|++....+... ....+++. T Consensus 161 ~~~~~~~~~~~~lq~ie~drl~~~~~~~~~~~i~~GVE~d~~Gr~vaY~i~~~hPgd~~~~~~~~~~~~r~~~~~~v~a~ 240 (553) T protein:vir:63 161 WDRAANRPYATCFQMVSTDRLSNPYQQLDTPTLRRGVQYDKRGRPQGYWIQVAHPGDLYQMAPDMYKWKFVQQSKPWGRR 240 (553) T ss_pred eccCCCCcccceEEEechhhcCCCCCCCCCCeeEeeeEECCCCceEEEEeeccCCCccccccccccceeeeccccccChh Confidence 6543 32 4577888887764 3344556667777754432210 12357899 Q ss_pred eeEEeecCCCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHccCCcceeeeeCCcCCHHHHHHHH-------------- Q lcl|Aclame:pro 171 EVVPIRFFNPDGLERGLSLMESLKSTIFSEDSSRNATAAMWKNAGRPNLVLRHEKRLSPEAQQRLR-------------- 236 (518) Q Consensus 171 ~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~p~gil~~~~~~~~e~~~~~~-------------- 236 (518) +|||+..+...++..|+|++..++..+......++....-.+-.+...++|+.+.+. ....+.+. T Consensus 241 ~vlH~f~~~r~gQ~RGis~lapvl~~l~~l~~y~daeL~~a~i~A~~a~fi~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 319 (553) T protein:vir:63 241 QVIHILEPREPDQSRGIADIVSGLKDMRMAKRFKEMSLQNAVINASYAAAIESELPP-EFIHSQMSGGSPNADMVGIFGK 319 (553) T ss_pred HheecccccCCCcccCCchHHHHHHHHHHHhHHHHHHHHHHHHhhhheeeeecCCCh-hhhhhhcccccccccccccccc Confidence 999999998889999999999999999999999998888888888888888866421 11111110 Q ss_pred --HHHHHHhcC----ccccccceeccCCcccccccCChhhHHHHHHHHHHHHHHHHHhccchHhh-ccccccccccHHHH Q lcl|Aclame:pro 237 --EQFDRAHAG----SSNTGKTMVVEEGMEPIPLQLTAVEMQFIEARQLNREEVCGVYDIAPPIV-HILDRATFSNISAQ 309 (518) Q Consensus 237 --~~~~~~~~g----~~n~g~~~vl~~g~~~~~~~~~~~d~q~~e~~~~~~~~Ia~~fgVpp~~l-g~~~~~~~s~~e~~ 309 (518) ......+.+ .-+.|.+..|..|.+++....+-....|.++.+.+.+.||+.+|||.+.| |+.++.|||+..+. T Consensus 320 ~~~~~~~~~~~~~~~~l~pG~i~~L~pGe~i~~~~p~~p~~~~~~F~~~~lr~iaaglGi~Ye~lt~D~s~~nYSS~R~~ 399 (553) T protein:vir:63 320 YMDALKAYVGGANNIQIDGAKIPHLFPGTKLNLKPMGTPGGVGSEFEASLNRHLASAFGMSYEEFTRDFSKANYSSIQAG 399 (553) T ss_pred cccccccccccccceeecCceeeecCCCCeeeecCCCCCCCCHHHHHHHHHHHHHhhcCCCHHHHhhhcccccHHHHHHH Confidence 111111111 12467888899999998888776678899999999999999999998755 77778889887654 Q ss_pred HHH-----------HHHHHHHHHHHH-HHHHHHhhhcc--hhhc----------c--ceeeechhhhhccCHHHHHHHHH Q lcl|Aclame:pro 310 MRA-----------FYRDTMAIPIAR-IQSAMDKYVGQ--YWVR----------K--NRMKFDIDDVIQPDWEAKSESTQ 363 (518) Q Consensus 310 ~~~-----------~~~~~l~P~~~~-ie~~ln~~l~~--~~~~----------~--~~~~fd~~~l~~~d~~~~~~~~~ 363 (518) ... |...-++|+... +++++-...++ .... . ..+++-.-.....|+.+.++... T Consensus 400 ~~e~~r~~~~~q~~~~~~~~~pi~~~wl~~a~l~G~i~~p~~~~~~~~~~p~~~~a~~~~~w~~p~~~~iDP~Ke~~A~~ 479 (553) T protein:vir:63 400 IAMTRRFLEGRKKMCADRLATEFFTLWLEEAIAAGEVPMPPGQTRDLFYQPLMKEALSKCEWIGASQGQIDQLKETQAAV 479 (553) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccCCCcccchhhcchhhhhhhhceeeecCCccccChHHHHHHHH Confidence 443 334444554443 33333332221 1000 0 11233333456779999999999 Q ss_pred HHHhCCCcCHHHHHHHHhCCCCCC--------ccCceeeecccccccccccccCCCCCCCCCCCCcccCCCCCccCCccc Q lcl|Aclame:pro 364 KMVNSGVATPNEGREIMGLPRSDD--------PKADELYANSALQPLGATPDGAVEGEEAPAPKRPASTPVASLDQSPPA 435 (518) Q Consensus 364 ~~~~~g~~T~NE~R~~~g~~pi~~--------~~gD~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 435 (518) .++.+|+.|.-|+-.+.|.++-+. .-.+++-++....+-... ..++ ...+...+....... T Consensus 480 ~~i~~G~~t~~~~~a~~G~D~~~v~~q~a~e~~~~~~~Gl~~~~~~~~~~----~~~~-------~~~~~~~~~~~~~~~ 548 (553) T protein:vir:63 480 MRIDAGLSTYEREIARLGGDFRKSFAQRAREDALLKKYGLTFNLSAKRSL----GDGR-------DAATGIAEDPAAAQT 548 (553) T ss_pred HHHHcCCCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCCCCCCcccc----CCCc-------ccCCCCCCCCCCCCc Confidence 999999999999988889876431 001111111111110000 0000 000000000000000 Q ss_pred ccccc Q lcl|Aclame:pro 436 SVPGL 440 (518) Q Consensus 436 ~~~~~ 440 (518) ++.++ T Consensus 549 ~~~~e 553 (553) T protein:vir:63 549 SQQGE 553 (553) T ss_pred ccccC Confidence 00000 No 117 >protein:vir:99853 Length: 488 # NCBI annotation: portal protein # Family: family:all:313 # MgeID: mge:1480 # MgeName: B3 # Cross-refs: genbank:acc:YP_164068;genbank:gi:56692600;genbank:GeneID:3192581 Probab=99.88 E-value=5.3e-22 Score=137.22 Aligned_cols=448 Identities=13% Similarity=0.066 Sum_probs=239.3 Q ss_pred CCCCCCCCCccccccccchhhhhhhccC-ccCCccc----CccchhhHHHHhhhHHHHHHHHHHHHhhccCceEEEEecC Q lcl|Aclame:pro 1 MLLANGQTLSAPAMAELSPQMQDSYYYA-PAVGMQL----ERQFSLYGGIYKNQPWVRTVIAKRAQALARLPVKCMFTSG 75 (518) Q Consensus 1 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~----~~~~~~~~~~~~~~~~v~~~v~~ia~~ia~lp~~v~~~~~ 75 (518) ...++..++ ...........+++. ......+ ..+..++.++ ++.+.|.+|++.+...|.+++|.|...++ T Consensus 4 ~~l~~e~at----~~~~~d~~~~~~~~l~~~~~~il~~a~~g~~~~y~~l-~~D~~i~s~l~~rk~av~~~~w~i~p~~~ 78 (488) T protein:vir:99 4 PALGREIAT----SGDGRDITRPFISGLQVPNDSILQRRGGNDLRVYEEI-LSDAQVKTVWGQRQLAVVSREWKVEAGGD 78 (488) T ss_pred cchhHHHHH----HHhhhhhhccccCCCCCCChHHHHhhccCCHHHHHHH-hhChHHHHHHHHHHHHHhcCCceEEcCCC Confidence 111111110 000111111111110 0000000 0012334444 56899999999999999999999976443 Q ss_pred CceeeecchHHHHHhhccCccCCHHHHHHHHHHHHHHcCCeeEEeeeCCCC---ceeeeeeeCCcceEEEeccCcceEEE Q lcl|Aclame:pro 76 DTETEEHDTGYAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQKNKSG---TPEKLMPMHPSRVAIKRNSRTGRYEY 152 (518) Q Consensus 76 ~~~~~~~~~~~~~l~~~PN~~~t~~~f~~~~~~~~ll~G~~~~~i~~~~~G---~~~~l~~l~p~~v~~~~~~~~~~~~~ 152 (518) +.........+..++.+ ..+.++++.++ +.+.+|.++.++++..+| .+..+.+.++.++.+.. +++. .+ T Consensus 79 ~~~~~~~ae~v~~~l~~----~~~~~~l~~~l-da~~~G~s~~Ei~w~~~~g~~~~~~l~~r~~~~f~~d~--~~~l-~~ 150 (488) T protein:vir:99 79 RPIDQAAAEHLEQQLQR----VGWDRVTSKML-FGVFYGYAVSELIYGRDDRYITLEAIKVRNRRRFRYDQ--DGGL-RL 150 (488) T ss_pred ChHHHHHHHHHHHHHhC----CCHHHHHHHHH-hhhhhcceeEEEEEeecCCeeeEeeeeeecccceeecC--CCce-EE Confidence 22111122234444444 35778888775 577899999999997654 35678888888776543 3222 22 Q ss_pred EeeccCCCCceeEEEeee-e-eEEeecCCCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHccCCcceeeeeCC-cCCH Q lcl|Aclame:pro 153 YFQAGAGVGTQLVSFADD-E-VVPIRFFNPDGLERGLSLMESLKSTIFSEDSSRNATAAMWKNAGRPNLVLRHEK-RLSP 229 (518) Q Consensus 153 ~~~~~~~~~~~~~~~~~~-~-vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~p~gil~~~~-~~~~ 229 (518) .... ....+ ..++.. . ++| ++....+..||.|.+..++..+.......++...|.+.-|.|-.+.+++. ..++ T Consensus 151 ~~~~-~~~~g--~~lp~~~~~i~~-~~~~~~g~p~g~gLl~~~~w~~~fK~~~~~~w~~f~E~yG~P~~igky~~~~a~~ 226 (488) T protein:vir:99 151 LTPN-NMFEG--EPCPAPYFWHFS-TGADNDDEPYGLGLAHWLYWPVFFKRNGIKFWLIFLDKFGMPTAVGRYDDKTATP 226 (488) T ss_pred eccC-CCCCc--cccccCceEEEE-eecCCCCCcccchHHHHHHHHHHHHHhhHHHHHHHHHHcCCceeeeecCCCCCCH Confidence 2211 11122 345433 2 333 33444567899999999999999999999999999999999998888885 6788 Q ss_pred HHHHHHHHHHHHHhcCccccccceeccCCcccccccCCh-hhHHHHHHHHHHHHHHHHHhccchHhhccccccccccHHH Q lcl|Aclame:pro 230 EAQQRLREQFDRAHAGSSNTGKTMVVEEGMEPIPLQLTA-VEMQFIEARQLNREEVCGVYDIAPPIVHILDRATFSNISA 308 (518) Q Consensus 230 e~~~~~~~~~~~~~~g~~n~g~~~vl~~g~~~~~~~~~~-~d~q~~e~~~~~~~~Ia~~fgVpp~~lg~~~~~~~s~~e~ 308 (518) ++++++.+.+.+..+. ..+|++.|++++-+..+. ....|.++.++..++|+.++ +-..+-+..++++++..+. T Consensus 227 ~ek~~l~~av~~~~~~-----~~~viP~~~~ie~~ea~~~~~~~~~~li~~~d~~Isk~i-LGqtlts~~~~Gs~a~~~v 300 (488) T protein:vir:99 227 EDKAKLLAALHAIQTD-----SAIIMPAGMQAELLEAGRSGTADYKTLHDTMDATIAKVG-LGQVASTQGTPGRLGNDDL 300 (488) T ss_pred HHHHHHHHHHHHHhcC-----cEEEecCCceeEEeecCCCChHHHHHHHHHHHHHHHHHH-hhhhhcccccccchhhHHH Confidence 8888888888776432 357888887776554322 22347888888889998874 1122322222334444333 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhcchhhc-----c--ceeeechhhhhccCHHHHHHHHHHHHhC-CC-cCHHHHHHH Q lcl|Aclame:pro 309 QMRAFYRDTMAIPIARIQSAMDKYVGQYWVR-----K--NRMKFDIDDVIQPDWEAKSESTQKMVNS-GV-ATPNEGREI 379 (518) Q Consensus 309 ~~~~~~~~~l~P~~~~ie~~ln~~l~~~~~~-----~--~~~~fd~~~l~~~d~~~~~~~~~~~~~~-g~-~T~NE~R~~ 379 (518) .. ......+.-.++.|++.||+.|+...-. . -.+.|+ .....|.+++++.++++++. |+ ++..++|++ T Consensus 301 h~-~v~~d~~~aDa~~i~~tln~~li~~l~~~N~~~~~~p~~~~~--~~e~edl~~~a~~~~~l~~~~G~~i~~~~i~e~ 377 (488) T protein:vir:99 301 QA-DVRLDLVKADADLICESFNLGPARWLTEWNFPGAQPPRVYRV--IEEPEDITAKAERDEKVFRMSGFRPTRGYVQET 377 (488) T ss_pred HH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcCCcCCceeEec--CCCcccHHHHHHHHHHHHhhcCCCCCHHHHHHH Confidence 33 5567788899999999999887654321 1 134454 44567889999999999986 65 788889999 Q ss_pred HhCCCCCCccCceeeecccccccccccccCCCCCCCCCCCCcccCCCCCccCCccccccccChhhhcchhHHHHHHHHHH Q lcl|Aclame:pro 380 MGLPRSDDPKADELYANSALQPLGATPDGAVEGEEAPAPKRPASTPVASLDQSPPASVPGLSPTNSDRSTDSGKTEPRRL 459 (518) Q Consensus 380 ~g~~pi~~~~gD~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 459 (518) +|+|+-.+ ++....+.. +. ..++ .....++. .. ..+....+.+ T Consensus 378 ~Gip~~~~--~~~~~~~~~----------------~~---~~~~---~~~~~~~~-------~~----~~~~~~~~~~-- 420 (488) T protein:vir:99 378 YGVEVEST--QAEATAPTP----------------ST---EFAE---GDQPSDPA-------AA----MAPQLAEAMQ-- 420 (488) T ss_pred cCCCCccc--ccccccCCC----------------cc---cCCC---CCCCCCch-------HH----HHHHHHHHHH-- Confidence 99987542 222111100 00 0000 00000000 00 0000000000 Q ss_pred hhccCcchhHHHHHHHHHHHhhhhhhhcccccchh--------hhhhhHHHHHHHH---HH-HHh-hhcccC Q lcl|Aclame:pro 460 MQKPPPKESSPKHLRAVKGAMGRGKDIKGFALQLA--------EKYPDDLEDILLA---VQ-LAL-AERKDN 518 (518) Q Consensus 460 ~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~---~~-~~~-~~~~~~ 518 (518) ..-....+.+.+++...++++....+.. ..+.+-|++...+ +. .++ +++++- T Consensus 421 -------~~~~~~~~~i~~~l~~a~s~ee~~~~L~~l~~~~d~~~l~~~l~~a~~~a~l~G~~~~~~e~~~~ 485 (488) T protein:vir:99 421 -------PVVGNWTTQLRTLIEQASSLEDLRERLLDLAPQLSLDQYAQAMAEGLEAAHLAGRNDVQEELDGR 485 (488) T ss_pred -------HHHHHHHHHHHHHHHhcCCHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhhhhhHhhhhccc Confidence 0111111222223322222221111111 1112222211111 11 111 222222 No 118 >protein:vir:96738 Length: 505 # NCBI annotation: putative phage-related protein # Family: family:all:47 # MgeID: mge:1628 # MgeName: VP882 # Cross-refs: genbank:acc:YP_001039817;genbank:gi:126010916;genbank:GeneID:5076248 Probab=99.88 E-value=5.9e-24 Score=147.95 Aligned_cols=420 Identities=9% Similarity=0.039 Sum_probs=249.9 Q ss_pred CCCCCCCccccccccchhh----------hhhhccCc----cCCc-----cc----------CccchhhHHHHhhhHHHH Q lcl|Aclame:pro 3 LANGQTLSAPAMAELSPQM----------QDSYYYAP----AVGM-----QL----------ERQFSLYGGIYKNQPWVR 53 (518) Q Consensus 3 f~~~~~~~~~~~~~~~~~~----------~~~~~~~~----~~~~-----~~----------~~~~~~~~~~~~~~~~v~ 53 (518) |++....+.-.-+.+++.. ...|.+.. ..++ .. ....+..++++.+|+++. T Consensus 1 ~~r~~~~~~~~dr~i~~~~~~~~~~~~~~~~~y~aa~~~r~~~~w~~~~~~~s~~~~i~~~~~~lr~RaRdL~rNn~~a~ 80 (505) T protein:vir:96 1 MKRAEKKPSLAQRMVNWAWYRYVEPQKNAARAFEAARRDRLGKAWLRRASRLSADEEIYADLASLVQRAREQSINNPYAK 80 (505) T ss_pred CCCCccccchhhcccchhhhhhHHHHHHhhhhcccccCCCccccccCCCCCCChHHHHHHHHHHHHHHHHHHHhcChHHH Confidence 4443332221111111100 00111110 0011 00 112344578899999999 Q ss_pred HHHHHHHHhhcc-CceEEEEecCCc----eeeec---chHHHHHhhccC----ccCCHHHHHHHHHHHHHHcCCeeEEee Q lcl|Aclame:pro 54 TVIAKRAQALAR-LPVKCMFTSGDT----ETEEH---DTGYAKLLADPC----EYLDPFAFWEWVASTLDIYGETYLAIQ 121 (518) Q Consensus 54 ~~v~~ia~~ia~-lp~~v~~~~~~~----~~~~~---~~~~~~l~~~PN----~~~t~~~f~~~~~~~~ll~G~~~~~i~ 121 (518) .+|+.+...+.+ ..+.+...-... ..+.. ......+...+| ..++++++...++..++..|++|+.++ T Consensus 81 ~av~~~~~nvVG~~Gi~~~~~~~~~~~~~~~~~~~~ie~~w~~Wa~~~~~D~~g~~~f~~lq~l~~r~~~~dGE~f~~~~ 160 (505) T protein:vir:96 81 RFYQLLKNNVIGPKGMTFQSRVKRRNGKPDDRANTLIEGNWQQWIKKGNCDVTGRYHFVTLLHLWMETLARDGEVLVREH 160 (505) T ss_pred HHHHHHHHHhcCCCcceeeecCCcccccccHHHHHHHHHHHHHhcCCcCcceeccCCHHHHHHHHHHHHhhCCceEEEEe Confidence 999988888875 566665432111 11111 111223334444 347899999999999999999999887 Q ss_pred eCCCC-ceeeeeeeCCcceE----------------EEeccCcceEEEEeeccCCC---------CceeEEEeeeeeEEe Q lcl|Aclame:pro 122 KNKSG-TPEKLMPMHPSRVA----------------IKRNSRTGRYEYYFQAGAGV---------GTQLVSFADDEVVPI 175 (518) Q Consensus 122 ~~~~G-~~~~l~~l~p~~v~----------------~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~vih~ 175 (518) +...+ .+..|..|+|+++. |..+..|..+.|++....+. ......+++++|||+ T Consensus 161 ~~~~~~~~~~lqliepd~l~~~~n~~~~~~~~i~~GIe~d~~Gr~~aY~i~~~hPgd~~~~~~~~~~~~~rvpa~~vlH~ 240 (505) T protein:vir:96 161 RGYPNKWGYALQILECDRLDLNYNADLQNGNRIRMSIELDAWERPVAYHLLVNHPGDNSYCYHYAGQTYERVPADEIIHT 240 (505) T ss_pred ecCCCCcceEEEEechhhcCCCCCcccCCcCeEEeceEECCCCceEEEEEeecCCCccccccccccccccccCHhHhhhh Confidence 65443 35678888877763 34455566778877644321 123456899999999 Q ss_pred ecCCCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHccCCcceeeeeCCcCCHHHHHHHHHHHHHHhcCccccccceec Q lcl|Aclame:pro 176 RFFNPDGLERGLSLMESLKSTIFSEDSSRNATAAMWKNAGRPNLVLRHEKRLSPEAQQRLREQFDRAHAGSSNTGKTMVV 255 (518) Q Consensus 176 ~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~p~gil~~~~~~~~e~~~~~~~~~~~~~~g~~n~g~~~vl 255 (518) ..+...++..|+|++..+...+.......+....-.+-.+...++|+.+.+........ ....... .-..|.+..| T Consensus 241 f~~~r~gQ~RGis~lapvl~~l~~l~~y~dael~~a~i~A~~a~fi~~~~~~~~~~~~~---~~~~~~~-~l~pG~i~~L 316 (505) T protein:vir:96 241 FVPWRPHQNRGIPWTHASMVELHHIGEYRKSEMIAAELGAKKVGFYEQDPEAYDQPPED---DQGEIVE-EVEAGTYQLL 316 (505) T ss_pred hcccCCccccCcchHHHHHHHHHHHhHHHHHHHHHHHHhhhheeeeecCCccCCCcccc---ccCcccc-ccCCceeeec Confidence 99988899999999999999999999999998888888889889998764322111000 0011111 1246788899 Q ss_pred cCCcccccccCChhhHHHHHHHHHHHHHHHHHhccchHhh-ccccccccccHHHHHHH-----------HHHHHHHHHHH Q lcl|Aclame:pro 256 EEGMEPIPLQLTAVEMQFIEARQLNREEVCGVYDIAPPIV-HILDRATFSNISAQMRA-----------FYRDTMAIPIA 323 (518) Q Consensus 256 ~~g~~~~~~~~~~~d~q~~e~~~~~~~~Ia~~fgVpp~~l-g~~~~~~~s~~e~~~~~-----------~~~~~l~P~~~ 323 (518) ..|.+++.+..+.....|.++.+.+.+.||+.+|||.+.+ |+.++.|||+..+.... |+..-++|+.. T Consensus 317 ~pGe~i~~~~~~~p~~~~~~f~~~~lr~iaaglgi~ye~lt~D~s~~nYSS~R~~~~e~~r~~~~~q~~~~~~~~~pi~~ 396 (505) T protein:vir:96 317 PYGIRFKEHKIDHPHTNFGAFVKSSLRGVAAGMGPAYNRLAHDLEGVNFSSLRSGELDERDLYKLLQFFVVTELLERVAG 396 (505) T ss_pred CCCCeeeeeCCCCCCCCHHHHHHHHHHHHHhhcCCCHHHHhcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Confidence 9999999888776778899999999999999999998765 67777888887655443 34445566444 Q ss_pred H-HHHHHHhhhcch--hhcc--ceeeechhhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHHhCCCCCCccCceeeeccc Q lcl|Aclame:pro 324 R-IQSAMDKYVGQY--WVRK--NRMKFDIDDVIQPDWEAKSESTQKMVNSGVATPNEGREIMGLPRSDDPKADELYANSA 398 (518) Q Consensus 324 ~-ie~~ln~~l~~~--~~~~--~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~T~NE~R~~~g~~pi~~~~gD~~~~~~n 398 (518) . ++.++-...++. .... ..+.+-.-.....|+.+.++....++.+|+.|.-|+-.+.|.++-+ .-+++..-.. T Consensus 397 ~~l~~a~l~G~i~~p~~~~~~~~~~~w~~p~~~~iDP~Ke~~a~~~~i~~G~~t~~~~~a~~G~D~~~--v~~q~a~e~~ 474 (505) T protein:vir:96 397 NLISMSLLTQALPLNMVDIDRLSQYAFQPRGWDWVDPAKDSKAHSESIKNRTRSRSSIIRAAGDDPED--VFDEIAWEEQ 474 (505) T ss_pred HHHHHHHHcCCcCCCCccchhhceeeeccCCccccChHHHHHHHHHHHHcCCCCHHHHHHHcCCCHHH--HHHHHHHHHH Confidence 3 444444433321 1111 1234444455677999999999999999999999988888988743 1111100000 Q ss_pred -ccccccccccCCCCCCCCCCCCcccCCCCCccCCccccc Q lcl|Aclame:pro 399 -LQPLGATPDGAVEGEEAPAPKRPASTPVASLDQSPPASV 437 (518) Q Consensus 399 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 437 (518) +..++-... .+... ......++.++...++ T Consensus 475 ~~~~~Gl~~~-----~~~~~----~~~~~~~~~~~~~~d~ 505 (505) T protein:vir:96 475 LMRDKGVNPT-----PPEQE----SKDATTDEEDDSASDD 505 (505) T ss_pred HHHHcCCCCC-----CCCCC----CCCCCCCCCCCCCCCC Confidence 000000000 00000 0000000000000000 No 119 >protein:vir:79063 Length: 491 # NCBI annotation: gp3 # Family: family:all:313 # MgeID: mge:1862 # MgeName: phiE255 # Cross-refs: genbank:acc:YP_001111203;genbank:gi:134288841;genbank:GeneID:4960737 Probab=99.87 E-value=1.9e-20 Score=128.67 Aligned_cols=450 Identities=14% Similarity=0.077 Sum_probs=250.2 Q ss_pred CCCCCCCCCcccc---ccccchhhhhhhccCccCCcccC---------ccchhhHHHHhhhHHHHHHHHHHHHhhccCce Q lcl|Aclame:pro 1 MLLANGQTLSAPA---MAELSPQMQDSYYYAPAVGMQLE---------RQFSLYGGIYKNQPWVRTVIAKRAQALARLPV 68 (518) Q Consensus 1 ~~f~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~v~~~v~~ia~~ia~lp~ 68 (518) +--|+......+. ...+... ...+...+..+.... .+..++.++ ++++.|.+|++.+...|.+++| T Consensus 7 ~~~g~~~~~~~~~~~~~~~ia~~-~~~~~~~~~~~~~p~~~~il~~~~~~~~~y~~m-~~D~~i~s~l~~Rk~av~~~~w 84 (491) T protein:vir:79 7 VSPTEFVKFGEPDKSLSSQIATR-ARSIDFFALGMYLPNPDPVLKALGKDIRVYREL-RADAHVGGCVRRRKAAVKALEW 84 (491) T ss_pred CCCCCcccccccchhHHHHHhhh-ccccccccccccCcchhHHHhhccCCHHHHHHH-hhChHHHHHHHHHHHHHhCCCc Confidence 2222221111110 1111100 011111111111110 123455555 4899999999999999999999 Q ss_pred EEEEecCCceeeecchHHHHHhhccCccCCHHHHHHHHHHHHHHcCCeeEEeeeCCCC---ceeeeeeeCCcceEEEecc Q lcl|Aclame:pro 69 KCMFTSGDTETEEHDTGYAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQKNKSG---TPEKLMPMHPSRVAIKRNS 145 (518) Q Consensus 69 ~v~~~~~~~~~~~~~~~~~~l~~~PN~~~t~~~f~~~~~~~~ll~G~~~~~i~~~~~G---~~~~l~~l~p~~v~~~~~~ 145 (518) .|...+++.. ....+..++.++ .+.+++..+. +.+.+|.++.++++...| .+..+.+.++.++.+.. T Consensus 85 ~i~~~~~~~~---~a~~i~e~l~~~----~~~~~i~~~l-da~~~G~s~~Ei~w~~~~g~~~~~~l~~r~~~~f~~d~-- 154 (491) T protein:vir:79 85 GLDRGKAKSR---VAKSIADVFADL----DLSRIATEML-DAVLYGYQPMEITWGKVGNYIVPIDVVGKPADWFVYDP-- 154 (491) T ss_pred EEecCCCCHH---HHHHHHHHHhcC----CHHHHHHHHH-HhhhhcceeEEEEEeecCCeeeEEeeeeecccceeecc-- Confidence 9987554321 223444555544 4667777654 577899999999987654 35688889998887544 Q ss_pred CcceEEEEeeccCCCCceeEEEeeeeeEEeecCCCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHccCCcceeeeeCC Q lcl|Aclame:pro 146 RTGRYEYYFQAGAGVGTQLVSFADDEVVPIRFFNPDGLERGLSLMESLKSTIFSEDSSRNATAAMWKNAGRPNLVLRHEK 225 (518) Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~p~gil~~~~ 225 (518) ++. ..+.... + ......+++..+|++++....+..+|.|.+..++..+.......++...|.+.-|.|-.+.+++. T Consensus 155 ~~~-l~l~~~~-~--~~~g~~lp~~k~i~~~~~~~~g~p~g~gLl~~~~w~~~fK~~~~~~w~~f~E~~G~P~~igky~~ 230 (491) T protein:vir:79 155 ENQ-LRFRSKE-H--WVQGEELPARKFLVPRQEATYLNPYGFPDLSMCFWPTTFKKGGLKFWVQFTEKYGSPMLVGKHPR 230 (491) T ss_pred CCc-eEEeecC-C--CCCceeecCCCeEEEEecCCCCCcccchhHHHHHHHHHHHHhhHHHHHHHHHHcCCCeEEEecCC Confidence 332 2222211 1 12235678888888888777788899999999999999999999999999999999999999999 Q ss_pred cCCHHHHHHHHHHHHHHhcCccccccceeccCCcccccccCC---hhhHHHHHHHHHHHHHHHHHhccchHhhccc---- Q lcl|Aclame:pro 226 RLSPEAQQRLREQFDRAHAGSSNTGKTMVVEEGMEPIPLQLT---AVEMQFIEARQLNREEVCGVYDIAPPIVHIL---- 298 (518) Q Consensus 226 ~~~~e~~~~~~~~~~~~~~g~~n~g~~~vl~~g~~~~~~~~~---~~d~q~~e~~~~~~~~Ia~~fgVpp~~lg~~---- 298 (518) +.++++.+++.+.+.+.... ..+|++.|++++-+..+ ..-..|.+..++..++|+.++ +|.+ T Consensus 231 ~a~~~ek~~l~~al~~~~~~-----a~~viP~~~~ie~~ea~~~~g~~~~y~~li~~~d~~Isk~i------LGqtlTt~ 299 (491) T protein:vir:79 231 SASDAETNLLLDRLEDMVQD-----AVAVIPDDSSIEIKEAAGKSGSADVYERLLHFCRGEVSIAL------LGQNQTTE 299 (491) T ss_pred CCCHHHHHHHHHHHHHHhcC-----eEEEecCCceeEEEeccCCCCChhHHHHHHHHHHHHHHHHH------hhhhhccC Confidence 99999999998888886432 34788888777655332 222337777888888888764 4432 Q ss_pred cccccccHHHHHHHHHHHHHHHHHHHHHHHHHhhhcchhh-----ccceeeechhhhhccCHHHHHHHHHHHHhCCC-cC Q lcl|Aclame:pro 299 DRATFSNISAQMRAFYRDTMAIPIARIQSAMDKYVGQYWV-----RKNRMKFDIDDVIQPDWEAKSESTQKMVNSGV-AT 372 (518) Q Consensus 299 ~~~~~s~~e~~~~~~~~~~l~P~~~~ie~~ln~~l~~~~~-----~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~-~T 372 (518) .+++++..+. ........+.-.++.|++.||+ |+...- ....++|.+.... .+.+.+++.++++++.|+ ++ T Consensus 300 ~~gs~a~~~v-h~~v~~~i~~~D~~~i~~tln~-li~~l~~~N~~~~~~p~f~~~e~e-e~~~~~a~~~~~L~~~G~~i~ 376 (491) T protein:vir:79 300 ATSTRASAQA-GLEVTDDIRDGDKAIVVEAMNM-LIRWICDLNFDGAARPVFDMWEQE-QVDEIQAGRDEKLTRAGARFT 376 (491) T ss_pred cccchhhHHH-HHHHHHHHHHHHHHHHHHHHHH-HHHHHHHhcCCCCCcceEeecCcC-chhHHHHHHHHHHHhCCCccC Confidence 2334444333 3345566778888999999986 543321 1123445544432 223567889999999987 88 Q ss_pred HHHHHHHHhCCCCCCccCceeeecccccccccccccCCCCCCCCCCCCcccCCCCCccCCccccccccChhhhcchhHHH Q lcl|Aclame:pro 373 PNEGREIMGLPRSDDPKADELYANSALQPLGATPDGAVEGEEAPAPKRPASTPVASLDQSPPASVPGLSPTNSDRSTDSG 452 (518) Q Consensus 373 ~NE~R~~~g~~pi~~~~gD~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 452 (518) .+++|+++|+|+-+ .+.....+.. .... ........ . ....+..+. ..+. T Consensus 377 ~~~~~e~~Gip~~~--~~e~~~~~~~--------~~~~------~~~~~~~~------~----~~~~~~~d~---~~~~- 426 (491) T protein:vir:79 377 PAYFKRAYNLQDGD--LDERPLPVSA--------VDAV------GAASFAEF------E----APDQDALDA---ALNA- 426 (491) T ss_pred HHHHHHHhCCCCCC--CCccccCcCc--------cccc------cccccccc------C----CCCCcchHH---HHHH- Confidence 89999999998653 2222211000 0000 00000000 0 000000000 0000 Q ss_pred HHHHHHHhhccCcchhHHHHHHHHHHHhhhhhhhcccccchhhhh----hhHHHHHHHHHHHHhhhcccC Q lcl|Aclame:pro 453 KTEPRRLMQKPPPKESSPKHLRAVKGAMGRGKDIKGFALQLAEKY----PDDLEDILLAVQLALAERKDN 518 (518) Q Consensus 453 ~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~ 518 (518) . ..+. ..+.-....+.+.+++...++++....+..+.+ .++|++++ +-...+|.+.-- T Consensus 427 ~--~~~~-----~~~~~~~~~~~i~~~l~~~~s~~e~~~~L~~l~~~~d~~~l~~~l-~~a~~~A~l~Gr 488 (491) T protein:vir:79 427 L--SARD-----LNADAQALVAPLLKRIANGASADELLGMLAELYPSLDTDALQERL-ARAIFVANLWGR 488 (491) T ss_pred H--HHHH-----HHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHhhcCCHHHHHHHH-HHHHHHHHHhhh Confidence 0 0000 011122223344445544443333222222222 11222211 111122332222 No 120 >protein:vir:1986 Length: 512 # NCBI annotation: Hypothetical protein # Family: family:all:313 # MgeID: mge:320 # MgeName: Mu # Cross-refs: genbank:acc:NP_050633;genbank:gi:9633520;genbank:GeneID:2636304 Probab=99.87 E-value=5.8e-21 Score=131.53 Aligned_cols=455 Identities=13% Similarity=0.058 Sum_probs=245.6 Q ss_pred CCCCCCCCCcccccccc--chhhhhhhccCccCCccc---------------CccchhhHHHHhhhHHHHHHHHHHHHhh Q lcl|Aclame:pro 1 MLLANGQTLSAPAMAEL--SPQMQDSYYYAPAVGMQL---------------ERQFSLYGGIYKNQPWVRTVIAKRAQAL 63 (518) Q Consensus 1 ~~f~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~v~~~v~~ia~~i 63 (518) =..|+....+....... -.++...+.+.+..|... .+...++.++.++.+.|.+|++.+...| T Consensus 6 d~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~gltp~~l~~iL~~a~~gd~~~~~~L~~dm~~~D~hi~s~l~~Rk~av 85 (512) T protein:vir:19 6 DISGQPFDFDDEMQSRSDELAMVMKRTQEHPSSGVTPNRAAQMLRDAERGDLTAQADLAFDMEEKDTHLFSELSKRRLAI 85 (512) T ss_pred CCCCCccccccccccccchhcccchhhccccccCCCHHHHHHHHHHhhCCCHHHHHHHHHHHHhhChHHHHHHHHHHHHH Confidence 22344333222211110 012223333333333321 1112234455568999999999999999 Q ss_pred ccCceEEEEecCCceee-ecchHHHHHh-hccCccCCHHHHHHHHHHHHHHcCCeeEEeeeCCCC---ceeeeeeeCCcc Q lcl|Aclame:pro 64 ARLPVKCMFTSGDTETE-EHDTGYAKLL-ADPCEYLDPFAFWEWVASTLDIYGETYLAIQKNKSG---TPEKLMPMHPSR 138 (518) Q Consensus 64 a~lp~~v~~~~~~~~~~-~~~~~~~~l~-~~PN~~~t~~~f~~~~~~~~ll~G~~~~~i~~~~~G---~~~~l~~l~p~~ 138 (518) .+++|.|....++.... .....+..++ ..| .+.+++..++ +.+.+|-+++++++...+ .+..+.+.+|.. T Consensus 86 ~~~~w~I~p~~~~~~~~~~~a~~v~~~l~~~~----~f~~~~~~ll-dA~~~G~s~~Ei~w~~~~g~~~~~~~~~r~~~~ 160 (512) T protein:vir:19 86 QALEWRIAPARDASAQEKKDADMLNEYLHDAA----WFEDALFDAG-DAILKGYSMQEIEWGWLGKMRVPVALHHRDPAL 160 (512) T ss_pred hCCCceEecCCCCCHHHHHHHHHHHHHHhcCC----CHHHHHHHHH-hhhhhcceeeeeEeeeeCCceeeeeeeeecccc Confidence 99999998654332111 1111222222 223 3667777654 577799999999986543 467888888887 Q ss_pred eEEEeccCcceEEEEeeccCCCCceeEEEeeeeeEEeecCCCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHccCCcc Q lcl|Aclame:pro 139 VAIKRNSRTGRYEYYFQAGAGVGTQLVSFADDEVVPIRFFNPDGLERGLSLMESLKSTIFSEDSSRNATAAMWKNAGRPN 218 (518) Q Consensus 139 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~p~ 218 (518) +.+..+.. ..+.+. . . ......+++...|..++....+..+|.+.+..++..+.......++...|.+.-|.|- T Consensus 161 f~~~~~~~-~~lr~~--~-~--~~~G~~l~~~k~i~~~~~~~~g~p~g~gLlr~~~w~~~fK~~~~~~w~~f~E~yG~P~ 234 (512) T protein:vir:19 161 FCANPDNL-NELRLR--D-A--SYHGLELQPFGWFMHRAKSRTGYVGTNGLVRTLIWPFIFKNYSVRDFAEFLEIYGLPM 234 (512) T ss_pred ceeccCCC-cEEEec--C-C--CCCceeecCCceEEEeccCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHHHHcCCCe Confidence 77655332 232221 1 1 1122457777777777777778889999999999999999999999999999999999 Q ss_pred eeeeeCCcCCHHHHHHHHHHHHHHhcCccccccceeccCCcccccccCCh-hhHHHHHHHHHHHHHHHHHhccchHhhcc Q lcl|Aclame:pro 219 LVLRHEKRLSPEAQQRLREQFDRAHAGSSNTGKTMVVEEGMEPIPLQLTA-VEMQFIEARQLNREEVCGVYDIAPPIVHI 297 (518) Q Consensus 219 gil~~~~~~~~e~~~~~~~~~~~~~~g~~n~g~~~vl~~g~~~~~~~~~~-~d~q~~e~~~~~~~~Ia~~fgVpp~~lg~ 297 (518) -+.+++.+.++++.+++.+.+.+..+. ..+|++.|++++-+..+. ...-|.++.++..++|+.+. +|. T Consensus 235 ~igky~~~a~~~ek~~L~~al~~~~~~-----a~~iiP~~~~ie~~ea~~~~~~~y~~li~~~d~~Isk~i------LGq 303 (512) T protein:vir:19 235 RVGKYPTGSTNREKATLMQAVMDIGRR-----AGGIIPMGMTLDFQSAADGQSDPFMAMIGWAEKAISKAI------LGG 303 (512) T ss_pred eEEecCCCCCHHHHHHHHHHHHHHhhC-----cEEEecCCceEEEeecCCCCHHHHHHHHHHHHHHHHHHH------hhh Confidence 999999999999999999888886432 357888888776554322 33447888888899998873 443 Q ss_pred c------cccccccHHHHHHHHHHHHHHHHHHHHHHHHHhhhcchhhc-----------cceeeechhhhhccCHHHHHH Q lcl|Aclame:pro 298 L------DRATFSNISAQMRAFYRDTMAIPIARIQSAMDKYVGQYWVR-----------KNRMKFDIDDVIQPDWEAKSE 360 (518) Q Consensus 298 ~------~~~~~s~~e~~~~~~~~~~l~P~~~~ie~~ln~~l~~~~~~-----------~~~~~fd~~~l~~~d~~~~~~ 360 (518) + .+++++. .+.........+.-.++.|+..||+.|+...-. .-.++|+ .....|.+..++ T Consensus 304 tlTs~~g~~Gs~a~-~~vh~ev~~di~~aDa~~i~~tln~~li~~l~~~N~~~~~~~~~~p~~~f~--~~e~eDl~~~a~ 380 (512) T protein:vir:19 304 TLTTEAGDKGARSL-GEVHDEVRREIRNADVGQLARSINRDLIYPLLALNSDSTIDINRLPGIVFD--TSEAGDITALSD 380 (512) T ss_pred hhcccccccchhhH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCccccceEEec--CCChhhHHHHHH Confidence 2 1222332 233445677788899999999999887754311 1134454 445678888888 Q ss_pred HHHHHHhCCC-cCHHHHHHHHhCCCCCCccCceeeecccccccccccccCCCCCCCCCCCCcccCCCCCccCCccccccc Q lcl|Aclame:pro 361 STQKMVNSGV-ATPNEGREIMGLPRSDDPKADELYANSALQPLGATPDGAVEGEEAPAPKRPASTPVASLDQSPPASVPG 439 (518) Q Consensus 361 ~~~~~~~~g~-~T~NE~R~~~g~~pi~~~~gD~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 439 (518) .+.++. .|+ ++..++|+++|+|... + ++....+....+ +......+... .... +. + T Consensus 381 ~~~~l~-~G~~i~~~~i~e~~Gip~~~-~-~e~~~~~~~~~~------------~~~~~~~~~~~---~~~~-~~----~ 437 (512) T protein:vir:19 381 AIPKLA-AGMRIPVSWIQEKLHIPQPV-G-DEAVFTIQPVVP------------DNGSQKEAALS---AEDI-PQ----E 437 (512) T ss_pred HHHHHh-cCCCCCHHHHHHHhCCCCCC-C-ccccccCCCccc------------ccccccccccc---ccCC-Cc----h Confidence 888876 454 8889999999996543 2 222221110000 00000000000 0000 00 0 Q ss_pred cChhhhcchhHHHHHHHHHHhhccCcchhHHHHHHHHHHHhhhhhhhcccccchhhhh----hhHHHHHHHHHHHHhhhc Q lcl|Aclame:pro 440 LSPTNSDRSTDSGKTEPRRLMQKPPPKESSPKHLRAVKGAMGRGKDIKGFALQLAEKY----PDDLEDILLAVQLALAER 515 (518) Q Consensus 440 ~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~ 515 (518) +..+......+..+. .-....+.+.+++.. .+++....+..+.+ .++|++++ +-.+.+|.+ T Consensus 438 ~~~d~~~~~~~~~~~-------------~~~~~~~~i~~~~~~-~s~ee~~~~L~~l~~~ld~~~l~~~l-~~a~~~A~l 502 (512) T protein:vir:19 438 DDIDRMGVSPEDWQR-------------SVDPLLKPVIFSVLK-DGPEAAMNKAASLYPQMDDAELIDML-TRAIFVADI 502 (512) T ss_pred hhHhHHhhhHHHHHH-------------HHHHHHHHHHHHHHh-CCHHHHHHHHHHHhccCCHHHHHHHH-HHHHHHHHH Confidence 000000000000000 000000111111110 01100000000111 11111100 111111222 Q ss_pred ccC Q lcl|Aclame:pro 516 KDN 518 (518) Q Consensus 516 ~~~ 518 (518) .-- T Consensus 503 ~G~ 505 (512) T protein:vir:19 503 WGR 505 (512) T ss_pred hhh Confidence 111 No 121 >protein:vir:107880 Length: 491 # NCBI annotation: gp29 # Family: family:all:313 # MgeID: mge:1565 # MgeName: BcepMu # Cross-refs: genbank:acc:YP_024702;genbank:gi:48696939;genbank:GeneID:2845968 Probab=99.86 E-value=2.2e-20 Score=128.37 Aligned_cols=450 Identities=16% Similarity=0.088 Sum_probs=249.4 Q ss_pred CCCCC---CCCCccccccccchhhh--hhhccCccCCcccC----------ccchhhHHHHhhhHHHHHHHHHHHHhhcc Q lcl|Aclame:pro 1 MLLAN---GQTLSAPAMAELSPQMQ--DSYYYAPAVGMQLE----------RQFSLYGGIYKNQPWVRTVIAKRAQALAR 65 (518) Q Consensus 1 ~~f~~---~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~v~~~v~~ia~~ia~ 65 (518) -|.+. ....+.... .....+. ..+...+..|.... .+..++.++ ++++.|.+|++.+...|.+ T Consensus 4 ~i~~~~g~p~~~~~~~~-~~~~~ia~~~~~~~~~~~~~~~~~~~~iLr~~~~~~~~y~~m-~~D~~i~s~l~~Rk~av~~ 81 (491) T protein:vir:10 4 GLWVSPTEFVTFGEPDK-SLSSQIATRARSIDFFALGMYLPNPDPVLKALGKDIRVYREL-RADAHVGGCVRRRKAAVKA 81 (491) T ss_pred ceeCCCCCccCcccCCh-HHHHHHHhhhcccccccccCCccchHHHHHhcCCCHHHHHHH-hhChHHHHHHHHHHHHHhC Confidence 11111 111111000 0000000 00001111111111 123455555 4899999999999999999 Q ss_pred CceEEEEecCCceeeecchHHHHHhhccCccCCHHHHHHHHHHHHHHcCCeeEEeeeCCCC---ceeeeeeeCCcceEEE Q lcl|Aclame:pro 66 LPVKCMFTSGDTETEEHDTGYAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQKNKSG---TPEKLMPMHPSRVAIK 142 (518) Q Consensus 66 lp~~v~~~~~~~~~~~~~~~~~~l~~~PN~~~t~~~f~~~~~~~~ll~G~~~~~i~~~~~G---~~~~l~~l~p~~v~~~ 142 (518) ++|.|...+++. .....+..++.++ .+.+++..+. +.+.+|.++.++++...| .+..+.+.++.++.+. T Consensus 82 ~~w~i~~~~~~~---~~~e~v~e~l~~~----~~~~~l~~~l-da~~~G~s~~Ei~w~~~~g~~~~~~l~~r~~~~f~~d 153 (491) T protein:vir:10 82 LEWGLDRGKAKS---RVAKSIADVFADL----DLSRIVTEML-DAVLYGYQPMEITWGKVGNYIVPIDVVGKPADWFVYD 153 (491) T ss_pred CCcEEecCCCCH---HHHHHHHHHHhcC----CHHHHHHHHH-HhhhhcceeEEEEEeecCCeeEEEEeeeecccceeec Confidence 999997654432 1223445555554 4777887765 678899999999997654 3568888888887754 Q ss_pred eccCcceEEEEeeccCCCCceeEEEeeeeeEEeecCCCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHccCCcceeee Q lcl|Aclame:pro 143 RNSRTGRYEYYFQAGAGVGTQLVSFADDEVVPIRFFNPDGLERGLSLMESLKSTIFSEDSSRNATAAMWKNAGRPNLVLR 222 (518) Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~p~gil~ 222 (518) . ++ ...+.... .......+++..+|++++....+..||.|.+..++..+.......++...|.+.-|.|--+.+ T Consensus 154 ~--~~-~l~~~~~~---~~~~g~~l~~~k~i~~~~~~~~~~p~g~gLl~~~~w~~~fK~~~~~~w~~f~E~yG~P~~igk 227 (491) T protein:vir:10 154 P--EN-QLRFRSKD---HWMQGEELPARKFLVPRQEATYLNPYGFPDLSMCFWPTTFKKGGLKFWVQFTEKYGSPMLVGK 227 (491) T ss_pred c--CC-ceEEecCC---CCCCcceecCCCEEEEEecCCCCCcccchhHHHHHHHHHHHHHHHHHHHHHHHHcCCCeEEEe Confidence 3 22 23332211 112235678888888887777778899999999999999999999999999999999999999 Q ss_pred eCCcCCHHHHHHHHHHHHHHhcCccccccceeccCCcccccccCC--hhhH-HHHHHHHHHHHHHHHHhccchHhhccc- Q lcl|Aclame:pro 223 HEKRLSPEAQQRLREQFDRAHAGSSNTGKTMVVEEGMEPIPLQLT--AVEM-QFIEARQLNREEVCGVYDIAPPIVHIL- 298 (518) Q Consensus 223 ~~~~~~~e~~~~~~~~~~~~~~g~~n~g~~~vl~~g~~~~~~~~~--~~d~-q~~e~~~~~~~~Ia~~fgVpp~~lg~~- 298 (518) ++.+.++++++++.+.+.+..+. ..+|++.|++++-+..+ .... -|.+..++..++|+.+. +|.+ T Consensus 228 y~~~a~~~ek~~l~~al~~~~~~-----a~~viP~~~~ie~~ea~~~~g~~~~y~~li~~~d~~Isk~i------LGqtl 296 (491) T protein:vir:10 228 HPRSASDGEKNLLLDCLEDMVQD-----AVAVVPDDSSIEIKEAAGKTGSADVYERLLHFCRGEVSIAL------LGQNQ 296 (491) T ss_pred cCCCCCHHHHHHHHHHHHHHhcC-----cEEEecCCceeEEEecCCCCCChhHHHHHHHHHHHHHHHHH------hhhhc Confidence 99999999999999888886432 35788888877655432 2222 37777888888887763 3332 Q ss_pred ---cccccccHHHHHHHHHHHHHHHHHHHHHHHHHhhhcchh-----hccceeeechhhhhccCHHHHHHHHHHHHhCCC Q lcl|Aclame:pro 299 ---DRATFSNISAQMRAFYRDTMAIPIARIQSAMDKYVGQYW-----VRKNRMKFDIDDVIQPDWEAKSESTQKMVNSGV 370 (518) Q Consensus 299 ---~~~~~s~~e~~~~~~~~~~l~P~~~~ie~~ln~~l~~~~-----~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~ 370 (518) .+++++..+. ........+.-.++.|+..||+ |+... +...+.+|.+.... .+.+.+++.++++++.|+ T Consensus 297 Tt~~~gs~a~~~v-h~~v~~di~~~D~~~i~~tln~-li~~l~~~N~~~~~~p~f~~~~~~-e~~~~~a~~~~~L~~~G~ 373 (491) T protein:vir:10 297 TTEATSTRASAQA-GLEVTDDIRDGDKAVVSEAMNM-LIRWICDLNFDGADRPVFDMWEQE-QVDEIQAGRDQKLTQAGA 373 (491) T ss_pred ccCcccchhHHHH-HHHHHHHHHHHHHHHHHHHHHH-HHHHHHHhcCCCCCcceEEecCcC-chhHHHHHHHHHHHhCCC Confidence 2334443333 3345666778888889988986 54322 11123344444432 334678999999999997 Q ss_pred -cCHHHHHHHHhCCCCCCccCceeeecccccccccccccCCCCCCCCCCCCcccCCCCCccCCccccccccChhhhcchh Q lcl|Aclame:pro 371 -ATPNEGREIMGLPRSDDPKADELYANSALQPLGATPDGAVEGEEAPAPKRPASTPVASLDQSPPASVPGLSPTNSDRST 449 (518) Q Consensus 371 -~T~NE~R~~~g~~pi~~~~gD~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 449 (518) ++..++|+++|+|.-+. +.... + ....... +. ...+.. ........+.. . T Consensus 374 ~i~~~~i~e~~Gip~~~~--~~~~~-~-------~~~~~~~-----~~-~~~~~~----------~~~~~~~~d~~---~ 424 (491) T protein:vir:10 374 RFTPAYFKRAYNLQDGDL--DERPL-P-------VSAVDTV-----GA-ASFAEF----------EAPDQDALDAA---L 424 (491) T ss_pred cCCHHHHHHHhCCCCCCc--Ccccc-c-------cCCCCCc-----cc-cccccc----------CCCCCCchHHH---H Confidence 88899999999986432 22211 0 0000000 00 000000 00000111100 0 Q ss_pred HHHHHHHHHHhhccCcchhHHHHHHHHHHHhhhhhhhcccccchhhhh----hhHHHHHHHHHHHHhhhcccC Q lcl|Aclame:pro 450 DSGKTEPRRLMQKPPPKESSPKHLRAVKGAMGRGKDIKGFALQLAEKY----PDDLEDILLAVQLALAERKDN 518 (518) Q Consensus 450 ~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~ 518 (518) +.. ..+. ..+.-....+.+.+++....+++....+..+.+ ..+|++++ +-.+.+|.+.-- T Consensus 425 ~~~---~~~~-----~~~~~~~~~~~i~~~l~~~~s~~e~~~~L~~l~~~~d~~~l~~~l-~~a~~~A~l~G~ 488 (491) T protein:vir:10 425 NTL---SARD-----LNADAQALVAPLLKRIANGASADELLGMLAELYPSLDADALQERL-ARAIFVANLWGR 488 (491) T ss_pred HHH---HHHH-----HHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHhhcCCHHHHHHHH-HHHHHHHHHhhh Confidence 000 0000 011122223344444544433332222222222 11122111 111122222222 No 122 >protein:vir:96068 Length: 765 # NCBI annotation: conserved hypothetical protein ORF017 # Family: family:all:297 # MgeID: mge:1597 # MgeName: F8 # Cross-refs: genbank:acc:YP_001294434;genbank:gi:149408331;genbank:GeneID:5237187 Probab=99.86 E-value=4.9e-22 Score=137.40 Aligned_cols=486 Identities=11% Similarity=0.056 Sum_probs=217.6 Q ss_pred CCCCCCCCCccccccccc---hhhhhhhccCccCCcc----------cCccchhhHHHHhhhHHHHHHHHHHHHhhccCc Q lcl|Aclame:pro 1 MLLANGQTLSAPAMAELS---PQMQDSYYYAPAVGMQ----------LERQFSLYGGIYKNQPWVRTVIAKRAQALARLP 67 (518) Q Consensus 1 ~~f~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~v~~~v~~ia~~ia~lp 67 (518) --|......-+.-...-+ +.+....++......+ .-..+. +..+|.++..++++|+++|++.-+-. T Consensus 60 ~~~~~~~~~~a~ds~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~gyq-l~alY~~~~l~rkiVd~pAeDa~R~g 138 (765) T protein:vir:96 60 KDFLEPGLSVAMDSAYGDGPTPAAKAAAGGQNPYVVPTMLQDWYNSQGFIGYQ-ACAIISQHWLVDKACSMSGEDAARNG 138 (765) T ss_pred CcccCcccceeccccccccccchHHHhhhccCccchhhHHHhhhcccCCccHH-HHHHHHhCchhhhhhhcchHHhhcCC Confidence 122211100000000000 0011000000000000 000112 23578999999999999999999988 Q ss_pred eEEEEecCCceeeecchHHHHHhhccCccCCHHHHHHHHHHHHHHcCCeeEEeeeC-CC---------------Cceeee Q lcl|Aclame:pro 68 VKCMFTSGDTETEEHDTGYAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQKN-KS---------------GTPEKL 131 (518) Q Consensus 68 ~~v~~~~~~~~~~~~~~~~~~l~~~PN~~~t~~~f~~~~~~~~ll~G~~~~~i~~~-~~---------------G~~~~l 131 (518) |.+.-.+++ ........+...+++- . ..+-+...+.+.-++|.+|+++.-. .+ |.+..| T Consensus 139 ~~I~~~~~e-~~~~~~~~l~~~~~rl---~-v~~~l~ea~~~~RlyGga~i~i~i~~~D~~~l~~PL~~~~I~kg~~kgl 213 (765) T protein:vir:96 139 WELKSDGRK-LSDEQSALIARRDMEF---R-VKDNLVELNRFKNVFGVRIALFVVESDDPDYYEKPFNPDGIAPGSYKGI 213 (765) T ss_pred ceeecCccc-cCHHHHHHHHHHHHHh---h-HHHHHHHHHHHhhhceeeEEEEEecccCcchhhccccccccccceeeEE Confidence 888532211 1111111222222222 1 2333444455566788888776442 12 234456 Q ss_pred eeeCCcceEEEe----ccC------cceEEEEeeccCCCCceeEEEeeeeeEEeecCCC------CcccccchHHHHHHH Q lcl|Aclame:pro 132 MPMHPSRVAIKR----NSR------TGRYEYYFQAGAGVGTQLVSFADDEVVPIRFFNP------DGLERGLSLMESLKS 195 (518) Q Consensus 132 ~~l~p~~v~~~~----~~~------~~~~~~~~~~~~~~~~~~~~~~~~~vih~~~~~~------~~~~~G~s~~~~~~~ 195 (518) ..++|..+.+.. ..+ +....|.+. + ..|.++-||||.+... ....+|.|.++.++. T Consensus 214 ~vldp~~~~~~~v~e~~~Dp~sp~fg~P~~y~i~------g--~~IH~SRli~~~g~~lpd~lk~~~~~~G~Svlq~~yd 285 (765) T protein:vir:96 214 SQIDPYWAMPQLTAESTADPSAEHFYEPDFWIIS------G--KKYHRSHLVVVRGPQPPDILKPTYIFGGIPLTQRIYE 285 (765) T ss_pred EEechhhcccccchhccccccccccCcceeeeec------C--ceeccceEEEecCCCchhhhccccCccCccHHHHHHH Confidence 666665555421 111 112222221 1 3577888999865542 233569999999999 Q ss_pred HHHHHHHHHHHHHHHHHccCCcceeeeeCCcCCHHHHHHHHHHHHHHhcCccccccceeccCCcccccccCChhhHHHHH Q lcl|Aclame:pro 196 TIFSEDSSRNATAAMWKNAGRPNLVLRHEKRLSPEAQQRLREQFDRAHAGSSNTGKTMVVEEGMEPIPLQLTAVEMQFIE 275 (518) Q Consensus 196 ~i~~~~~~~~~~~~~~~ng~~p~gil~~~~~~~~e~~~~~~~~~~~~~~g~~n~g~~~vl~~g~~~~~~~~~~~d~q~~e 275 (518) .|.....+......++.+......-+..-..+..+ +.+.+.+.......+| .++++++.+.+|+.++.+..+ +.+ T Consensus 286 ~I~~~~~t~~~~a~Ll~k~~~~v~k~~~~~~l~~~--~~l~~r~~~~~~~r~n-~g~~~id~ee~~e~~s~~lsg--l~d 360 (765) T protein:vir:96 286 RVYAAERTANEAPLLAMSKRTSTIHVDVEKAIANE--DAFNARLAFWIANRDN-HGVKVIGIDETMEQFDTNLSD--FDS 360 (765) T ss_pred HHHHHHHHHHHHHHHHHHhccceeeechHhhhccH--HHHHHHHHHHHHhcCC-ceeEEecCCcceeEEecccCC--HHH Confidence 99999988888888877766543322222222222 2233333333333233 457888888899888877665 457 Q ss_pred HHHHHHHHHHHHhccchHhh-ccccccccccHHHHHHHHHH-------HHHHHHHHHHHHHHHhhhcchhhccceeeech Q lcl|Aclame:pro 276 ARQLNREEVCGVYDIAPPIV-HILDRATFSNISAQMRAFYR-------DTMAIPIARIQSAMDKYVGQYWVRKNRMKFDI 347 (518) Q Consensus 276 ~~~~~~~~Ia~~fgVpp~~l-g~~~~~~~s~~e~~~~~~~~-------~~l~P~~~~ie~~ln~~l~~~~~~~~~~~fd~ 347 (518) ......+.||.+.+||...| |....+-.++.+.....||. ..|.|.++++-+.|-.. ......+.|.+ T Consensus 361 ~l~~~~~~iAaas~IP~t~LfGqsp~GlnATGe~D~~nYyD~I~s~Qe~~l~p~le~L~~li~~s----~~i~~d~~i~F 436 (765) T protein:vir:96 361 VIMNQYQLVAAIAKTPATKLLGTSPKGFNATGEHETISYHEELESIQEHIFDPLLERHYLLLAKS----ESIDVQLEIVW 436 (765) T ss_pred HHHHHHHHHHhhhCCCeeeeccCCcccccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh----cCCCCcceEEe Confidence 77888899999999999655 43334444555656666665 44566665555444322 11122355666 Q ss_pred hhhhccCHHHHHHH-------HHHHHhCCCcCHHHHHHHHhCCCC------CCccCc--eeeecccccccccccccCCCC Q lcl|Aclame:pro 348 DDVIQPDWEAKSES-------TQKMVNSGVATPNEGREIMGLPRS------DDPKAD--ELYANSALQPLGATPDGAVEG 412 (518) Q Consensus 348 ~~l~~~d~~~~~~~-------~~~~~~~g~~T~NE~R~~~g~~pi------~~~~gD--~~~~~~n~~~~~~~~~~~~~~ 412 (518) ..|...+.++++++ +++++++|+++++|+|+.+...+. ++...+ ...-|.+...+......... T Consensus 437 npL~~~sekEkAei~~k~Aea~~~~~~~Gvis~dEvR~~L~~~~~~g~~~l~d~~~e~~~~~~pe~~~~~~~~~~~~~~- 515 (765) T protein:vir:96 437 NPVDSTTSQQQAELNNKKAATDEIYINSGVVSPDEVRERLRDDPRSGYNRLTDDQAETEPGMSPENLAELEKAGAQSAK- 515 (765) T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHhccccCCCCCCCccccccccCCCccccccccCCCccccc- Confidence 68877787777665 677899999999999999865542 211100 01111111111110000000 Q ss_pred CCCCCCCCcccCCCCCccC-Ccccccc-ccChhhh--cchhHHHHHHHHHHhhccCcchhHHHHHHHHHHHhh-hhhhhc Q lcl|Aclame:pro 413 EEAPAPKRPASTPVASLDQ-SPPASVP-GLSPTNS--DRSTDSGKTEPRRLMQKPPPKESSPKHLRAVKGAMG-RGKDIK 487 (518) Q Consensus 413 ~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~--~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~-~~~~~~ 487 (518) ...........+..-++. ++....+ ...++.. ....-+..+++. .....+..++ ....... ..+-.. T Consensus 516 -~~~e~~~~~a~p~~~eg~~~~~~~~p~~~~p~~~~~~~~~g~~~~~p~------~~~p~~~~~~-~~~~~~~~~~~~~~ 587 (765) T protein:vir:96 516 -AKGEAERAEAQAGAVEGAGDPVPAAPRGTKPLAKAAEEGAGEAATPPS------RPNPRAELRN-LLSDLLSKLEALDD 587 (765) T ss_pred -ccCccccccCCCCccCCCCcccccCCcccCCccccccccCccccCccc------cccccccchh-cccchhhhhhcccc Confidence 000000000000000000 0000000 0011100 000111111111 1111111111 0000000 000000 Q ss_pred ccccchhhhhhhHHHHHHHHHHHHhhhcccC Q lcl|Aclame:pro 488 GFALQLAEKYPDDLEDILLAVQLALAERKDN 518 (518) Q Consensus 488 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 518 (518) +...+-....+.+...+..+..++-+.+-.+ T Consensus 588 ~a~~~g~~v~~~~~~a~~~a~~ps~a~~~~~ 618 (765) T protein:vir:96 588 AQAPDGVDIEQDDAPGLKRTSKPSVSGMEPS 618 (765) T ss_pred ccccCCCCCCCCccchhhhhhccccCCCCCc Confidence 1000000011223333333333333322222 No 123 >protein:vir:99563 Length: 862 # NCBI annotation: minor head protein-like protein # Family: family:all:297 # MgeID: mge:1544 # MgeName: BcepF1 # Cross-refs: genbank:acc:YP_001039808;genbank:gi:126011058;genbank:GeneID:4818258 Probab=99.85 E-value=1.9e-21 Score=134.24 Aligned_cols=484 Identities=10% Similarity=0.043 Sum_probs=216.9 Q ss_pred CCCCCCCCCc---cccccccchhhhhhhc----cCccCCc----------------ccCccchhhHHHHhhhHHHHHHHH Q lcl|Aclame:pro 1 MLLANGQTLS---APAMAELSPQMQDSYY----YAPAVGM----------------QLERQFSLYGGIYKNQPWVRTVIA 57 (518) Q Consensus 1 ~~f~~~~~~~---~~~~~~~~~~~~~~~~----~~~~~~~----------------~~~~~~~~~~~~~~~~~~v~~~v~ 57 (518) -+++.+.+.. .+....+...+.+.+. .....+. ..-.++. +..+|.+++.++++|+ T Consensus 76 ~~~~~~~a~~~a~~~~~~~~~~~~~Dgl~n~~~~lG~~~~~s~y~~~~~~~~~~~~~~f~gyq-l~alY~~~~larkiVd 154 (862) T protein:vir:99 76 SVSGKNFAMDSAVRSAIKAITGFAMDDGGGAPVPIGAEGKQSSYAVPEALQDWYLSQGFIGHQ-ACALIAQHWLVDKACS 154 (862) T ss_pred hhhhhhhcchhhcchhhhhhhhhhhhcchhhhhhccccccccccccchhccccccccCcccHH-HHHHHHhCchhhhhhh Confidence 1111111110 0111011111111100 0000000 0001122 2457899999999999 Q ss_pred HHHHhhccCceEEEEecCCce-eeecchHHHHHhhccCccCCHHHHHHHHHHHHHHcCCeeEEeeeC-CC---------- Q lcl|Aclame:pro 58 KRAQALARLPVKCMFTSGDTE-TEEHDTGYAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQKN-KS---------- 125 (518) Q Consensus 58 ~ia~~ia~lp~~v~~~~~~~~-~~~~~~~~~~l~~~PN~~~t~~~f~~~~~~~~ll~G~~~~~i~~~-~~---------- 125 (518) .+++.+.+-.+.+.-.+++.. .......+...+.+-+ -+.-|.+. +.+.-++|.+++++..+ .+ T Consensus 155 ~pAeDatR~g~~I~~~~d~~e~~~e~~~~ie~~~~rL~---v~~~l~ea-ir~~RLyGga~ililv~~~D~~~LsqPLn~ 230 (862) T protein:vir:99 155 LAGEDAIRNGWHLKSLGEGEEIDEESLEKFKAIDVEFK---VKENLIEF-NRFKNVFGIRVAIFVVDSEDPDYYEKPFNP 230 (862) T ss_pred hhhHHHhhCCceEeecCcccccCHHHHHHHHHHHHHhh---HHHHHHHH-HHhcccccceEEEEEecCcCchhhhcCcCc Confidence 999999999999874332211 1111122333333322 23344443 34444678777665422 22 Q ss_pred -----CceeeeeeeCCcceEEEe----ccC------cceEEEEeeccCCCCceeEEEeeeeeEEeecCCC------Cccc Q lcl|Aclame:pro 126 -----GTPEKLMPMHPSRVAIKR----NSR------TGRYEYYFQAGAGVGTQLVSFADDEVVPIRFFNP------DGLE 184 (518) Q Consensus 126 -----G~~~~l~~l~p~~v~~~~----~~~------~~~~~~~~~~~~~~~~~~~~~~~~~vih~~~~~~------~~~~ 184 (518) |.+.+|.+++|..+.+.. ..+ +....|.+. + ..+.++-||||.+... ...+ T Consensus 231 e~I~kG~lkgl~vlDp~w~~p~~v~~~~~Dp~sp~yGkP~~y~I~------g--~~IH~SRliif~g~~vpd~lk~ay~f 302 (862) T protein:vir:99 231 DGITPGSYRGISQIDPYWMMPMLTAESTADPSSQFFYEPEFWIIS------G--QKYHRSHLIIARGPQPADILKPTYIF 302 (862) T ss_pred ccccccceeEEEEechhhhcccccccccccccccccCCceeeeec------C--eeeccceeEEecCCCchhhhhccCCc Confidence 234567777777665421 111 122233221 1 3577888888865432 2234 Q ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHccCCcceeeeeC--CcCCHHHHHHHHHHHHHHhcCccccccceeccCCcccc Q lcl|Aclame:pro 185 RGLSLMESLKSTIFSEDSSRNATAAMWKNAGRPNLVLRHE--KRLSPEAQQRLREQFDRAHAGSSNTGKTMVVEEGMEPI 262 (518) Q Consensus 185 ~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~p~gil~~~--~~~~~e~~~~~~~~~~~~~~g~~n~g~~~vl~~g~~~~ 262 (518) +|+|.++.++..|.....+.......+.+..... ++++ ..+..+ +.+.+.+.....+.+| .++++++.+-+|+ T Consensus 303 ~G~SvLe~iyd~L~~~d~t~~saa~Ll~ka~l~v--~ktd~l~~l~~e--d~l~~r~~~~~~~rdN-~Gi~liD~eEe~e 377 (862) T protein:vir:99 303 GGIPLVQRIYERVYAAERTANEAPLLAMNKRTTA--IHTDTAKAIANE--DKFIQRLMFWVRYRDN-HAVKVLGTDETME 377 (862) T ss_pred cCccHHHHHHHHHHHHHHHHHHHHHHHHHhccce--eechhHhhhccH--HHHHHHHHHHHhccCc-ceeEEecCCCcee Confidence 6999999999999999999988888888755443 3333 223222 2233333333333233 4578888888898 Q ss_pred cccCChhhHHHHHHHHHHHHHHHHHhccchHh-hccccccccccHHHHHHHHHH-------HHHHHHHHHHHHHHHhhhc Q lcl|Aclame:pro 263 PLQLTAVEMQFIEARQLNREEVCGVYDIAPPI-VHILDRATFSNISAQMRAFYR-------DTMAIPIARIQSAMDKYVG 334 (518) Q Consensus 263 ~~~~~~~d~q~~e~~~~~~~~Ia~~fgVpp~~-lg~~~~~~~s~~e~~~~~~~~-------~~l~P~~~~ie~~ln~~l~ 334 (518) .++.+..+. .+........||.+.+||... +|....+..++.+.....|+. .-|.|+++++...+...+. T Consensus 378 ~ls~slSGL--~dll~~~~q~IAaas~IP~tiLfGqspaGlnATGE~D~~nYyD~I~s~QE~~L~P~LerL~~li~~~lg 455 (862) T protein:vir:99 378 QFDTSLADF--DAVIMGQYQLVASIAKTPATKLLGTAPKGFNSTGEFETISYHEELESIQEHVYMPFLQRHYLISRLSLG 455 (862) T ss_pred EEecccCCh--HHHHHHHHHHHHhhhCCCceeecccCcccccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC Confidence 887766653 466777778999999999985 554435555666666666665 5578888888877655543 Q ss_pred chhhccceeeechhhhhccCHHHHHHH-------HHHHHhCCCcCHHHHHHHH------hCCCCCCccCce--eeecccc Q lcl|Aclame:pro 335 QYWVRKNRMKFDIDDVIQPDWEAKSES-------TQKMVNSGVATPNEGREIM------GLPRSDDPKADE--LYANSAL 399 (518) Q Consensus 335 ~~~~~~~~~~fd~~~l~~~d~~~~~~~-------~~~~~~~g~~T~NE~R~~~------g~~pi~~~~gD~--~~~~~n~ 399 (518) . ... +.|.+..|...+.++++++ +++++.+|+++++|+|++| |++.++++...+ ...+.+. T Consensus 456 ~--~~d--~~ieFnpL~~~sekEkAEi~kk~Aea~~~lv~sGvispdEvR~~L~~~~~~g~~~l~ded~E~d~~~~~e~~ 531 (862) T protein:vir:99 456 I--QHE--IDVVMEPVASMTAQQQADLNKTKAEGGKVLIDGGVISPDEERNRIRDDKRSGYNRLTKEDAEETPGASPENL 531 (862) T ss_pred C--CCc--ceEEeCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHhcCCcCCCCCCcccccccCCCCcccc Confidence 1 123 4455567877787777765 5688999999999999987 455444321110 0011111 Q ss_pred cccccccccCCCCCCCCCCCCcccCCCCCccCCccccccccChhhhcchhHHHHHHHHHHhhccCcch--------hHHH Q lcl|Aclame:pro 400 QPLGATPDGAVEGEEAPAPKRPASTPVASLDQSPPASVPGLSPTNSDRSTDSGKTEPRRLMQKPPPKE--------SSPK 471 (518) Q Consensus 400 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~--------~~~~ 471 (518) ..+...+ ....+......+.+.....-+...+. .....+.+....-..+..+.+..+.... .++. T Consensus 532 ~~~e~~g--~a~~~ap~de~~aga~~~~~e~d~~~-----~p~~~~~~~g~~~~~t~~~~a~~p~~~~~~~~~~~~~~e~ 604 (862) T protein:vir:99 532 AAYQKAG--AAQETASAKETQAGAAVTTAEGDQPN-----VQMVPSMKPGQMVGPEVGITAPMPEDDAPVAGVVAKLAEL 604 (862) T ss_pred cccccCC--cccccccccccccccCCccccCCccc-----ccccCCCCCCCccccccccccCCCccccccCcccccchhh Confidence 1111000 00000000000000000000000000 0000000111000000111111111000 0000 Q ss_pred HHHHHHHHhhh---hhhhcccccchhhh-hh-hHHHHHHHHHHHHhhh------------c----ccC Q lcl|Aclame:pro 472 HLRAVKGAMGR---GKDIKGFALQLAEK-YP-DDLEDILLAVQLALAE------------R----KDN 518 (518) Q Consensus 472 ~~~~~~~~~~~---~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~------------~----~~~ 518 (518) ....+.+.+.. ..- +...++...+ -+ +..++ .|.+.+..+ . -.| T Consensus 605 ~~~~~~~~~~v~~~~~~-~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 669 (862) T protein:vir:99 605 QQAQMGAVTGVLARLVE-QLDRMHDRTIAEGADIGQY--DASGRTVKPGTIATIRPSVSGNHVGEQPT 669 (862) T ss_pred hcCcchhhcchhhhhHH-HHHhhhhhhhhhhcchhhh--ccccccccccccCCCCCcccccccccCCc Confidence 00000011111 000 0000000000 00 00000 000011111 1 011 No 124 >protein:vir:80040 Length: 461 # NCBI annotation: gp3 # Family: family:all:297 # MgeID: mge:1876 # MgeName: B054 # Cross-refs: genbank:acc:YP_001468707;genbank:gi:157325287;genbank:GeneID:5601731 Probab=99.85 E-value=1.4e-21 Score=134.84 Aligned_cols=397 Identities=10% Similarity=0.088 Sum_probs=217.8 Q ss_pred CCCCCCCCccccccccchhhhhhhccCc----c-------CCcccCccchhhHHHHhhhHHHHHHHHHHHHhhccCceEE Q lcl|Aclame:pro 2 LLANGQTLSAPAMAELSPQMQDSYYYAP----A-------VGMQLERQFSLYGGIYKNQPWVRTVIAKRAQALARLPVKC 70 (518) Q Consensus 2 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~----~-------~~~~~~~~~~~~~~~~~~~~~v~~~v~~ia~~ia~lp~~v 70 (518) |-.+.++...... ..+.....++.+.+ . .+.+-..++..+..+|..++.++++|+.+++.+-+-++.+ T Consensus 1 ~~~~~~a~~~~~~-~~a~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~~l~~lY~~~~l~r~iVd~~a~d~~r~g~~i 79 (461) T protein:vir:80 1 MYSIDKAKQAKID-SKIVNRNDFMVGHGKANSRDKLTRQTPGNGQKLDLKACENLYASNSIAMNIVDIISEDMVRAGWSL 79 (461) T ss_pred Cccchhhhhhhhh-hhhhhhhHHHhhcCCcchhhhhhccccCcccccCHHHHHHHHHhCCccchhhccchHHhhcCCeee Confidence 3333333322221 11111112111110 0 1111112455566889999999999999999999988877 Q ss_pred EEecCCceeeecchHHHHHhhccCccCCHHHHHHHHHHHHHHcCCeeEEeeeCCC-------------Cceee---eeee Q lcl|Aclame:pro 71 MFTSGDTETEEHDTGYAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQKNKS-------------GTPEK---LMPM 134 (518) Q Consensus 71 ~~~~~~~~~~~~~~~~~~l~~~PN~~~t~~~f~~~~~~~~ll~G~~~~~i~~~~~-------------G~~~~---l~~l 134 (518) .-.+ +. ....+...+.+ .-.+.. +...+.+..++|.+++++..... +.+.+ |.|+ T Consensus 80 ~~~~-~~----~~~~~~~~~~~---l~~~~~-l~~~~~~~rl~G~a~i~i~v~d~~~~~~~~~~pl~~~~~~~~~~l~~~ 150 (461) T protein:vir:80 80 KTDN-KE----MKKNIESKWRK---LKTKDR-FQKLYADKRLYGDGFLSIGVVSSNREQADLSTAIDPKTIKSIPYINTF 150 (461) T ss_pred ecCC-HH----HHHHHHHHHHH---hhHHHH-HHHHHHhhcccccEEEEEEeecCCccccCccCCcccccccceeEEEec Confidence 3211 10 00112222222 122334 44455566789999988754221 11122 2232 Q ss_pred CCcceEEE---ec----cCcceEEEEeecc---------CCCCceeEEEeeeeeEEeecCCCCcccccchHHHHHHHHHH Q lcl|Aclame:pro 135 HPSRVAIK---RN----SRTGRYEYYFQAG---------AGVGTQLVSFADDEVVPIRFFNPDGLERGLSLMESLKSTIF 198 (518) Q Consensus 135 ~p~~v~~~---~~----~~~~~~~~~~~~~---------~~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~i~ 198 (518) .+..+.+. .+ ..+....|.+... +..+...+.+.++.||||.+....+..+|.|.++.++..|. T Consensus 151 ~~~~i~~~~~~~dp~sp~fg~P~~y~i~~~~~~~~~~~~~~~~~~~~~iH~SRii~~~~~~~~~~~~G~S~le~~~~~l~ 230 (461) T protein:vir:80 151 NTQKVTQLYLNQDMFSEHFGEVEFFEVNRVSQLGEEILSGTTASTSEQIHRSRIIHEQGLRFEGETKGRSIFESLYDIIT 230 (461) T ss_pred cccccchhhhcccCcCcccccceEEEEeccccccccccccccCccceEEccccEEEecCCCCCccccCcchHHHHHHHHH Confidence 22222211 11 1233444444321 12234457899999999998887778899999999999999 Q ss_pred HHHHHHHHHHHHHHccCCcceeeeeCC--cCCHHHHHHHHHHHHHHhcCccccccceeccCCcccccccCChhhHHHHHH Q lcl|Aclame:pro 199 SEDSSRNATAAMWKNAGRPNLVLRHEK--RLSPEAQQRLREQFDRAHAGSSNTGKTMVVEEGMEPIPLQLTAVEMQFIEA 276 (518) Q Consensus 199 ~~~~~~~~~~~~~~ng~~p~gil~~~~--~~~~e~~~~~~~~~~~~~~g~~n~g~~~vl~~g~~~~~~~~~~~d~q~~e~ 276 (518) ....+......+..+-..+ +++++. .+..+......+.++... +..++.+++.+-+++.++.+..+ +.+. T Consensus 231 ~~~~~~~~~~~l~~~~~~~--v~k~~~l~~~~~~~~~~~~~~~~~~~----~~~g~~~~d~~e~~e~~~~~lsg--l~~~ 302 (461) T protein:vir:80 231 VMDTSLWSVGQILYDFAFK--VYKTDDIDALNKDDKANLTAMLDFMF----RTEALAIIKGDEQLTKESTNVSG--MKDL 302 (461) T ss_pred HHHHHHHHHHHHHHHhCCC--ceecchHHhhhchHHHHHHHHHHHhc----CCceEEEEcCCcceEEEecCcCC--HHHH Confidence 9998888888877775554 344442 233344444555555432 23457788888888888776665 4578 Q ss_pred HHHHHHHHHHHhccchHhhccccccccccHHHHHHHHHH-------HHHHHHHHHHHHHHHhhhcchh----hccceeee Q lcl|Aclame:pro 277 RQLNREEVCGVYDIAPPIVHILDRATFSNISAQMRAFYR-------DTMAIPIARIQSAMDKYVGQYW----VRKNRMKF 345 (518) Q Consensus 277 ~~~~~~~Ia~~fgVpp~~lg~~~~~~~s~~e~~~~~~~~-------~~l~P~~~~ie~~ln~~l~~~~----~~~~~~~f 345 (518) .+.....||.+-+||...|.....+..++.++....|+. .-+.|+++.+-+.|-+..+... ...+.+.| T Consensus 303 l~~~~~~iaa~s~iP~t~L~G~s~g~~asge~D~~~yyd~i~~~qe~~l~p~le~l~~~i~~s~~~~~~~~~p~~~~~~i 382 (461) T protein:vir:80 303 LDYGWDYLAGAVRMPKTVLKGQEAGTLTGAQYDVMNYYARVSSIQENRLRPQLEYLTRLLMWASDDCGPSIDPDSFEWAI 382 (461) T ss_pred HHHHHHHHhhhhcCCeeeeecccCCccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccCccccceEE Confidence 888889999999999976644344555666665555544 3456777766666554332211 11245667 Q ss_pred chhhhhccCHHHHHHH-------HHHHHhCCCcCHHHHHHHH-hCCCCCCccCceeeecccccccccccccCCCCCCCCC Q lcl|Aclame:pro 346 DIDDVIQPDWEAKSES-------TQKMVNSGVATPNEGREIM-GLPRSDDPKADELYANSALQPLGATPDGAVEGEEAPA 417 (518) Q Consensus 346 d~~~l~~~d~~~~~~~-------~~~~~~~g~~T~NE~R~~~-g~~pi~~~~gD~~~~~~n~~~~~~~~~~~~~~~~~~~ 417 (518) .+++|...|.+++++. +++++++|++|++|+|+.+ +.-.++++ + ++..++. ...+.... T Consensus 383 ~f~~L~~~s~kekAe~~~~~a~a~~~~~~~g~is~~e~r~~l~~~~~~~~~-~-------~~~~~~~-----~~~~~~~~ 449 (461) T protein:vir:80 383 EFNPLWNLDSKTDAEVRKLTAEADQIYIVNGVLDPDEVKETRFGRFGLENS-S-------KFSGDSA-----EIDKLAKL 449 (461) T ss_pred EeCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHhcCCCCC-c-------cCCCCCc-----hhhhhhhh Confidence 7778888887777664 7778999999999999876 32222111 0 0000000 00000000 Q ss_pred CCCcccCCCCCccCCcccc Q lcl|Aclame:pro 418 PKRPASTPVASLDQSPPAS 436 (518) Q Consensus 418 ~~~~~~~~~~~~~~~~~~~ 436 (518) ..+.... ++. .+ T Consensus 450 ~~~~~~~------e~~-~g 461 (461) T protein:vir:80 450 VYDAYAK------KNA-DG 461 (461) T ss_pred ccccccc------cCC-CC Confidence 0000000 000 00 No 125 >protein:vir:10321 Length: 495 # NCBI annotation: ORF23 # Family: family:all:47 # MgeID: mge:182 # MgeName: VHML # Cross-refs: genbank:acc:NP_758916;genbank:gi:27311190;genbank:GeneID:956137 Probab=99.85 E-value=4.8e-22 Score=137.49 Aligned_cols=420 Identities=15% Similarity=0.115 Sum_probs=236.8 Q ss_pred CCCCCCCCCccccccccchhhhhhhccCcc----CCcc-cC----------ccchhhHHHHhhhHHHHHHHHHHHHhhcc Q lcl|Aclame:pro 1 MLLANGQTLSAPAMAELSPQMQDSYYYAPA----VGMQ-LE----------RQFSLYGGIYKNQPWVRTVIAKRAQALAR 65 (518) Q Consensus 1 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~-~~----------~~~~~~~~~~~~~~~v~~~v~~ia~~ia~ 65 (518) |-|-.+ ...+++.+.........|.+... .+.+ .+ ...+..++++.+|+++..+|+.+...+-+ T Consensus 1 m~~~~~-~~~a~~~~~~~~~~~~~y~aa~~~~~~~~~~~~s~d~~~~~~~~~lr~RaRdl~rNn~~a~~av~~~~~~vVG 79 (495) T protein:vir:10 1 MNMTPS-GYQSLASGLLVPVGASAYEGASGGHRWQDIGDYGPDTAVASGIQTLRARSHHNVRNNPWATNAVATWVAAAVG 79 (495) T ss_pred CCcccc-cccccchhhhhHHHhhhhhccccCcccCCCCCCChhHHHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHhhcC Confidence 544443 12222222222222222211110 0111 11 12334578889999999999999999977 Q ss_pred CceEEEEecCCceeeecc-hHHHHHhhcc--CccCCHHHHHHHHHHHHHHcCCeeEEeeeCC--CC--ceeeeeeeCCcc Q lcl|Aclame:pro 66 LPVKCMFTSGDTETEEHD-TGYAKLLADP--CEYLDPFAFWEWVASTLDIYGETYLAIQKNK--SG--TPEKLMPMHPSR 138 (518) Q Consensus 66 lp~~v~~~~~~~~~~~~~-~~~~~l~~~P--N~~~t~~~f~~~~~~~~ll~G~~~~~i~~~~--~G--~~~~l~~l~p~~ 138 (518) -.+.......+......- .....+.+++ ...++++.+...++..++..|++|+.+++.. .| .+..|..++|++ T Consensus 80 ~Gi~p~~~~~~~~~~~~ie~~w~~wa~~~D~~g~~~f~~lq~l~~r~~~~dGE~f~~~~~~~~~~g~~~~~~lqliepd~ 159 (495) T protein:vir:10 80 NGLTPRWRMKEQELRQELQELWGDWVNEADFDEVQSFYGLQALVVRTVINSGEAFVIKKPRPLSEGLSVPLQLQIIEPDM 159 (495) T ss_pred CCcccccCCchHHHHHHHHHHHHHhhcCcccccccCHHHHHHHHHHHHHhCCceEEEEeecccCCCCccceEEEEechhh Confidence 666654433221111111 1112222222 2357899999999999999999999876643 33 356788888877 Q ss_pred eEE-----------------EeccCcceEEEEeeccCCC-------CceeEEEeeeeeEEeecCCCCcccccchHHHHHH Q lcl|Aclame:pro 139 VAI-----------------KRNSRTGRYEYYFQAGAGV-------GTQLVSFADDEVVPIRFFNPDGLERGLSLMESLK 194 (518) Q Consensus 139 v~~-----------------~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~ 194 (518) +.. ..+..|..+.|++....+. ......+++++|+|+.. ...++..|+|.+..+ T Consensus 160 l~~~~~~~~~~~g~~i~~GIe~d~~Gr~vaY~i~~~hpgd~~~~~~~~~~~rvpA~~vlH~f~-~r~gQ~RGis~la~i- 237 (495) T protein:vir:10 160 LASDIPDETLPSGGYVKGGIRFSNGGKRKAYCFYRNHPAESSLIGDPVDTVWIKAEHVLHVTV-LTVRSDAGAPWFQLL- 237 (495) T ss_pred cCCCCCCCCCCCCCEEEeceEECCCCceEEEEEeecCCCcccccccccceeeechhheEeccc-cCCCcccCcchhHHH- Confidence 742 2334455677777544432 12456799999999964 456889999977654 Q ss_pred HHHHHHHHHHHHHHHHHHccCCcceeeeeCCcCCH--HHHHH-HHHHHHHHhcCccccccceeccCCcccccccCChhhH Q lcl|Aclame:pro 195 STIFSEDSSRNATAAMWKNAGRPNLVLRHEKRLSP--EAQQR-LREQFDRAHAGSSNTGKTMVVEEGMEPIPLQLTAVEM 271 (518) Q Consensus 195 ~~i~~~~~~~~~~~~~~~ng~~p~gil~~~~~~~~--e~~~~-~~~~~~~~~~g~~n~g~~~vl~~g~~~~~~~~~~~d~ 271 (518) ..+......++....-.+-.+...++|+.+.+-.. +.... ....-..... .-+.|.+..|..|.+++.++.+.... T Consensus 238 ~~l~~l~~y~dael~~a~i~A~~~~fi~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~pG~i~~L~pGe~i~~~~p~~p~~ 316 (495) T protein:vir:10 238 LRLNELDQYEDAELVRKKTAALFAAFIQEATADSTGGPTIGQPKRSKGGKRIT-GLNPGTLQYLQPGQEVKFSNPADVGT 316 (495) T ss_pred HHHHHhhHHHHHHHHHHHHhhhheeeeecCCCccccccccCccccccCcccce-ecCCceeeecCCCCeeeeeCCCCCCC Confidence 45776677777777777777788888876532110 00000 0000000111 12467888899999999888776677 Q ss_pred HHHHHHHHHHHHHHHHhccchHhh-ccccccccccHHHHHHHHHH------------HHHHHHHHH-HHHHHHhhhc--c Q lcl|Aclame:pro 272 QFIEARQLNREEVCGVYDIAPPIV-HILDRATFSNISAQMRAFYR------------DTMAIPIAR-IQSAMDKYVG--Q 335 (518) Q Consensus 272 q~~e~~~~~~~~Ia~~fgVpp~~l-g~~~~~~~s~~e~~~~~~~~------------~~l~P~~~~-ie~~ln~~l~--~ 335 (518) .|.++.+.+.+.||+.+|||.+.+ |+.++.|||+..+....|.+ ..++|+... ++.++-...+ + T Consensus 317 ~~~~f~~~~lr~iaaglGi~Ye~ltgD~s~~nYSS~R~~~~e~~r~~~~~q~~~~~~~~~~pi~~~~l~~a~l~G~i~~p 396 (495) T protein:vir:10 317 TYEPWLRYQLLSIAKGYGITYEMLTGDLRGVNYSSIRAGLLEFRRLCQQVQHHMIIHQFCRPVGRWFMDFAVASGAVVIP 396 (495) T ss_pred CHHHHHHHHHHHHHhhcCCCHHHHhcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCC Confidence 899999999999999999999866 77778899888765544433 233443332 3333333222 1 Q ss_pred hhh--ccc--eeeechhhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHHhCCCCCCccCceee------ecccccccccc Q lcl|Aclame:pro 336 YWV--RKN--RMKFDIDDVIQPDWEAKSESTQKMVNSGVATPNEGREIMGLPRSDDPKADELY------ANSALQPLGAT 405 (518) Q Consensus 336 ~~~--~~~--~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~T~NE~R~~~g~~pi~~~~gD~~~------~~~n~~~~~~~ 405 (518) .+. +.. .++|-.-.....|+.+.++....++.+|+.|+-++-.+.|+++-+ .-+++- .-.++ +++.. T Consensus 397 ~~~~~~~~~~~~~w~~p~~~~vDP~Ke~~A~~~~i~~G~~s~~~~~a~~G~D~~~--v~~q~a~e~~~~~~~Gl-~~~~~ 473 (495) T protein:vir:10 397 DYLQRRRYYNRVSWRTPRWEEVDPLKKHLADLGDVRAGFAPISDKQAERGYDMEE--LFDMISDANQLIDEYDL-RLDSD 473 (495) T ss_pred CchhhhHhhhccccccCCccccChHHHHHHHHHHHHcCCCCHHHHHHHcCCCHHH--HHHHHHHHHHHHHHcCC-CCCCC Confidence 111 111 223333455677999999999999999999999988888988742 111110 00010 11110 Q ss_pred cccCCCCCCCCCCCCcccCCCCCccCCcccc Q lcl|Aclame:pro 406 PDGAVEGEEAPAPKRPASTPVASLDQSPPAS 436 (518) Q Consensus 406 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 436 (518) +.. .. .++..+....+...+++ T Consensus 474 p~~--------~~-~~~~~~~~~~~~~~~~e 495 (495) T protein:vir:10 474 PRY--------VN-GSGAEQKSVMEAALNNE 495 (495) T ss_pred CCc--------CC-CccCCCCCCCCCCCCCC Confidence 000 00 00000000000000000 No 126 >protein:vir:79647 Length: 435 # NCBI annotation: PorT # Family: family:all:297 # MgeID: mge:1872 # MgeName: TLS # Cross-refs: genbank:acc:YP_001285520;genbank:gi:148734503;genbank:GeneID:5220005 Probab=99.85 E-value=2.6e-21 Score=133.46 Aligned_cols=385 Identities=10% Similarity=0.051 Sum_probs=203.0 Q ss_pred CCCCCCCCCccccccccchhhhhhhccCccC-----CcccCccchhhHHHHhhhHHHHHHHHHHHHhhccCceEEEEecC Q lcl|Aclame:pro 1 MLLANGQTLSAPAMAELSPQMQDSYYYAPAV-----GMQLERQFSLYGGIYKNQPWVRTVIAKRAQALARLPVKCMFTSG 75 (518) Q Consensus 1 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~v~~~v~~ia~~ia~lp~~v~~~~~ 75 (518) =+|=.++..+...... +.+.|.+.... .......+.....+|.+++.++++|+.+|+.+.+..|.+.-. T Consensus 2 ~~~m~~~~~~~~~~D~----~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~Y~~~~l~~~~Vd~~aed~~r~g~~i~g~-- 75 (435) T protein:vir:79 2 GVFMSDKVKAITKEDG----YNEIFGSKDGTFRPNAFYMQRAAFKALSQFYEEDGMARRIVDVIPEEMVTPGFKVDGV-- 75 (435) T ss_pred Ccccccccccchhhcc----hhhhhcccccccccCcccCCcCCHHHHHHHHhcCchhhhhhccchHHhhcCCceecCC-- Confidence 2343333322221111 21222211111 011112344556788999999999999999999988887321 Q ss_pred CceeeecchHHHHHhhccCccCCHHHHHHHHHHHHHHcCCeeEEeeeC----------CCCceeeeeeeCCcceEEEec- Q lcl|Aclame:pro 76 DTETEEHDTGYAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQKN----------KSGTPEKLMPMHPSRVAIKRN- 144 (518) Q Consensus 76 ~~~~~~~~~~~~~l~~~PN~~~t~~~f~~~~~~~~ll~G~~~~~i~~~----------~~G~~~~l~~l~p~~v~~~~~- 144 (518) +.. ..+...+.+- .-+..| ...+.+..++|.+++++... ..|.+..+.+++|..|++... T Consensus 76 -~~~----~~~~~~~~~l---~~~~~l-~~a~~~~rl~G~~~i~i~~~d~~~~~~Pl~~~g~i~~i~v~d~~~i~~~~~~ 146 (435) T protein:vir:79 76 -KNE----KSFKSRWDEL---RLNAKI-IDALSWSRLFGGSAILAVVADNKMLKSPVKPGAQLEDIRVYDRYQITIHERE 146 (435) T ss_pred -ChH----HHHHHHHHHh---hHHHHH-HHHHHhhhccccEEEEEEecCCCCcccccccCCceeeEEeechhhccchhhc Confidence 111 1222222221 122333 44455556789888777642 223455788888877764321 Q ss_pred ------cCcceEEEEeeccCCCCceeEEEeeeeeEEeecC------CCCcccccchHH-HHHHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 145 ------SRTGRYEYYFQAGAGVGTQLVSFADDEVVPIRFF------NPDGLERGLSLM-ESLKSTIFSEDSSRNATAAMW 211 (518) Q Consensus 145 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~vih~~~~------~~~~~~~G~s~~-~~~~~~i~~~~~~~~~~~~~~ 211 (518) ..+....|.+... .+...+.+.++.||||.+. .+.+..+|.|++ +.+++.|.....+.......+ T Consensus 147 ~dp~sp~fg~P~~y~v~~~--~~~~~~~iH~SRli~~~g~~~p~~~~~~~~~~G~S~l~e~~~~~l~~~~~~~~~~~~l~ 224 (435) T protein:vir:79 147 TNARSVRYGEPKLYKISPG--GDIPEFFVHYSRICIIDGERVSNEKRRQNDGWGASILNKRLIEAIVDYNYCQELATQLL 224 (435) T ss_pred cCCcccccCcceEEEEecC--CCCCceEEcceeEEEecCCcchhhhccccCcccchHHHHHHHHHHHHHHHHHHHHHHHH Confidence 1233455555322 2334567899999999643 234556799998 688998998888888888776 Q ss_pred HccCCcceeeeeCC---cC-CHHHHHHHHHHHHHHhcCccccccceeccCCcccccccCChhhHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 212 KNAGRPNLVLRHEK---RL-SPEAQQRLREQFDRAHAGSSNTGKTMVVEEGMEPIPLQLTAVEMQFIEARQLNREEVCGV 287 (518) Q Consensus 212 ~ng~~p~gil~~~~---~~-~~e~~~~~~~~~~~~~~g~~n~g~~~vl~~g~~~~~~~~~~~d~q~~e~~~~~~~~Ia~~ 287 (518) ....... ++++. .+ ++.........+.......++.+.+++..++.+|+.++.+..+ +.+........||.+ T Consensus 225 ~~~~~~v--~~~~~l~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~i~~~~e~~e~~~~~lsg--l~~~~~~~~~~iaaa 300 (435) T protein:vir:79 225 RRKQQAV--WKARDLALMCDDEEGRYAARLRLAQVDDESGVGKAIGIDATDEEYEVLNSDVSG--VPEFLQEKIDRIVAL 300 (435) T ss_pred HHhcCcc--ccchhHHHhhcCccchHHHHHHHHHHHHhcCCCCceeEecCCcceEEEecccCC--HHHHHHHHHHHHHhh Confidence 5544432 33321 11 1222222333333222222234556666666778888776655 457788888999999 Q ss_pred hccchHhh-ccccccccccHHHHHHHHHHH-------HHHHHHHHHHHHHHhhhcchhhccceeeechhhhhccCHHHHH Q lcl|Aclame:pro 288 YDIAPPIV-HILDRATFSNISAQMRAFYRD-------TMAIPIARIQSAMDKYVGQYWVRKNRMKFDIDDVIQPDWEAKS 359 (518) Q Consensus 288 fgVpp~~l-g~~~~~~~s~~e~~~~~~~~~-------~l~P~~~~ie~~ln~~l~~~~~~~~~~~fd~~~l~~~d~~~~~ 359 (518) .+||...| |...++-.++.+.....|+.. .+.|.+.++-..+ .. ... +.|.+++|...|.++++ T Consensus 301 ~~IP~t~L~G~s~~glnstgd~d~~~yyd~i~~~Qe~~l~p~l~~l~~li----~~--s~d--~~~~f~pL~~~sekEkA 372 (435) T protein:vir:79 301 TGIHEIIIKNKNTGGVSASQNTALETFYKLIDRKRVEDYKPILEFLLPFM----IS--ETE--WSIEFEPLSVPSDKDKA 372 (435) T ss_pred hCCCeeeeccCCccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHh----hc--CCC--CeEEeCCCCCCCHHHHH Confidence 99999765 443333334555555555553 3444444433222 11 133 44455567777765554 Q ss_pred H-------HHHHHHhCCCcCHHHHHHHH-hCCCCCCccCceeeecccccccccccccCCCCCCCCCCCCcccCCCCCccC Q lcl|Aclame:pro 360 E-------STQKMVNSGVATPNEGREIM-GLPRSDDPKADELYANSALQPLGATPDGAVEGEEAPAPKRPASTPVASLDQ 431 (518) Q Consensus 360 ~-------~~~~~~~~g~~T~NE~R~~~-g~~pi~~~~gD~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 431 (518) + .+++++++|+++++|+|+.+ ...+...-.++. ...++... + ..+.+.+..++++ T Consensus 373 ei~~~~a~a~~~~~~~g~i~~~e~r~~L~~~~~~~~~~~~~------~~~~~~~~-----d------~~~~~~~e~g~~~ 435 (435) T protein:vir:79 373 EIMAKNVESVVKLKAEQAINLKETRDTLRSICPDLKIMDND------NIELPEPE-----D------LDPEPGQEGGLNK 435 (435) T ss_pred HHHHHHHHHHHHHHhcCCCCHHHHHHHHHHhccccCCCCcc------cccCCccc-----c------CCCCCCCCCCCCC Confidence 4 46677899999999999988 222111000100 00011000 0 0000000011111 No 127 >protein:vir:104338 Length: 422 # NCBI annotation: putative portal protein # Family: family:all:297 # MgeID: mge:1593 # MgeName: RTP # Cross-refs: genbank:acc:YP_398967;genbank:gi:81343951;genbank:GeneID:3778870 Probab=99.84 E-value=5.6e-21 Score=131.61 Aligned_cols=375 Identities=11% Similarity=0.085 Sum_probs=204.7 Q ss_pred ccccchhhhhhh-ccC---ccCCcccCccchhhHHHHhhhHHHHHHHHHHHHhhccCceEEEEecCCceeeecchHHHHH Q lcl|Aclame:pro 14 MAELSPQMQDSY-YYA---PAVGMQLERQFSLYGGIYKNQPWVRTVIAKRAQALARLPVKCMFTSGDTETEEHDTGYAKL 89 (518) Q Consensus 14 ~~~~~~~~~~~~-~~~---~~~~~~~~~~~~~~~~~~~~~~~v~~~v~~ia~~ia~lp~~v~~~~~~~~~~~~~~~~~~l 89 (518) +-. .+.....+ ++. ...+......+.....+|.+++.++++|+.+|+.+.+-.|.+...+ ... .+..- T Consensus 1 ~~~-~D~~~n~~~gg~~~~~~~~~~~~~~~~~l~a~Y~~~~l~~~~Vd~~aed~~r~g~~i~~~~--~~~-----~~~~~ 72 (422) T protein:vir:10 1 MVK-TDSYANIFLGGSDGSEIYGSLQNQAPTILASLYADNALVRRIIDTIPETALAAGFHIDGID--DEP-----AFWSR 72 (422) T ss_pred Ccc-chhhHHHHcCCCCCccccCcccccCHHHHHHHHHhChhhHHHHhhhhHHHhcCCccccCCC--HHH-----HHHHH Confidence 111 11111111 111 1112222233444567899999999999999999999888874211 111 11111 Q ss_pred hhccCccCCHHHHHHHHHHHHHHcCCeeEEeeeC----------CCCceeeeeeeCCcceEEEec-------cCcceEEE Q lcl|Aclame:pro 90 LADPCEYLDPFAFWEWVASTLDIYGETYLAIQKN----------KSGTPEKLMPMHPSRVAIKRN-------SRTGRYEY 152 (518) Q Consensus 90 ~~~PN~~~t~~~f~~~~~~~~ll~G~~~~~i~~~----------~~G~~~~l~~l~p~~v~~~~~-------~~~~~~~~ 152 (518) +.+ . ...+-+...+.+..++|.+++++... ..|.+..+.++++..|++... ..+....| T Consensus 73 ~~~---l-~~~~~l~~a~~~~rl~G~a~i~i~v~d~~~~~~Pl~~~g~~~~l~v~d~~~i~~~~~~~dp~s~~fg~P~~y 148 (422) T protein:vir:10 73 WDD---L-EMTQNINDAWSWARLFGGAAIVAIVKDNRALTSPVREGAELETVRVYDRTQVKVQTREENPRNARFGEPLTY 148 (422) T ss_pred HHH---h-hHHHHHHHHHHhhccccceEEEEEecCCCCccccccccCceeeEEeeccccccchhcccCccccccCcceEE Confidence 111 1 12333444455566789998887642 234566888888888775421 12344555 Q ss_pred EeeccCCCCceeEEEeeeeeEEeecCC------CCcccccchHHHH-HHHHHHHHHHHHHHHHHHHHccCCcceeeeeCC Q lcl|Aclame:pro 153 YFQAGAGVGTQLVSFADDEVVPIRFFN------PDGLERGLSLMES-LKSTIFSEDSSRNATAAMWKNAGRPNLVLRHEK 225 (518) Q Consensus 153 ~~~~~~~~~~~~~~~~~~~vih~~~~~------~~~~~~G~s~~~~-~~~~i~~~~~~~~~~~~~~~ng~~p~gil~~~~ 225 (518) .+... ..+..+.+.++.||||.+.. +....+|.|++.. +++.|.....+.......+....... ++++. T Consensus 149 ~v~~~--~~~~~~~iH~SRli~~~g~~~p~~~~~~~~~~G~S~l~~~~~~~i~~~~~~~~~~~~l~~~~~~~v--~~~~~ 224 (422) T protein:vir:10 149 RITTN--ESDMFYDVHYSRIHIIDGERIPNVMRRQNDGWGRSVLSSDILDSIKDYTNCERLATQLLKRKQQAV--WKAKG 224 (422) T ss_pred EEecC--CCCcceeeccceeEEeCCCCchhhhcccCCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcccc--ccchh Confidence 55432 23344678899999996542 3445689999986 78989888888888888776654442 33332 Q ss_pred ---cC-CHHHHHHHHHHHHHHhcCccccccceeccCCcccccccCChhhHHHHHHHHHHHHHHHHHhccchHhhcccccc Q lcl|Aclame:pro 226 ---RL-SPEAQQRLREQFDRAHAGSSNTGKTMVVEEGMEPIPLQLTAVEMQFIEARQLNREEVCGVYDIAPPIVHILDRA 301 (518) Q Consensus 226 ---~~-~~e~~~~~~~~~~~~~~g~~n~g~~~vl~~g~~~~~~~~~~~d~q~~e~~~~~~~~Ia~~fgVpp~~lg~~~~~ 301 (518) .+ +.+.....+..+........+.+.+++..++.+|+.++.+..+ +.+........||.+.+||...|...+.+ T Consensus 225 l~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~l~~~~e~~e~~~~~lsg--l~~~~~~~~~~iaaa~~IP~t~L~G~s~~ 302 (422) T protein:vir:10 225 LAELCDDSEGFGAARLRLAQVDNNSGVGQAIGIDAESEEYSVLNSDIGG--IDAFLDKKFDRIVALSGIHEIILKNKNVG 302 (422) T ss_pred HHHhcCCccchHHHHHHHHHHHHhcCCccceeEecCCcceEEEecccCC--hHHHHHHHHHHHHhhhCCCeeeeccCCcc Confidence 11 1222333333344333333344556666667889888877665 55778888999999999999866433333 Q ss_pred cc-ccHHHHHHHHHH-------HHHHHHHHHHHHHHHhhhcchhhccceeeechhhhhccCHHHHHH-------HHHHHH Q lcl|Aclame:pro 302 TF-SNISAQMRAFYR-------DTMAIPIARIQSAMDKYVGQYWVRKNRMKFDIDDVIQPDWEAKSE-------STQKMV 366 (518) Q Consensus 302 ~~-s~~e~~~~~~~~-------~~l~P~~~~ie~~ln~~l~~~~~~~~~~~fd~~~l~~~d~~~~~~-------~~~~~~ 366 (518) .. ++.+...+.|+. .-+.|.+..+-..| .. ... +.|.+.+|...+.+++++ .+++++ T Consensus 303 Glnatgd~d~~~yyd~i~~~Qe~~l~p~l~~l~~~i----~~--s~~--~~~~f~pL~~~sekekaei~~~~a~a~~~~~ 374 (422) T protein:vir:10 303 GVSSSQNTALETFHKLVDRKRNAELLPILEFLIPFI----VN--AEE--WSVEFNPLAQESSKDKAEILEKNVNSIAALI 374 (422) T ss_pred cccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHh----cc--cCC--cEEEeCCCCCCCHHHHHHHHHHHHHHHHHHH Confidence 33 445555555555 33455444433322 11 123 444445666666665554 466789 Q ss_pred hCCCcCHHHHHHHHhCCCCCCccCceeeecccccccccccccCCCCCCCCCCCCcccCCCCCccCCcccc Q lcl|Aclame:pro 367 NSGVATPNEGREIMGLPRSDDPKADELYANSALQPLGATPDGAVEGEEAPAPKRPASTPVASLDQSPPAS 436 (518) Q Consensus 367 ~~g~~T~NE~R~~~g~~pi~~~~gD~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 436 (518) ++|+++++|+|+.|--.... ..+..+..+.+..... ....|. ++++.+ T Consensus 375 ~~g~i~~~e~r~~L~~~~~~------~~~~~~~~~~~~~~~~--------~~~~~~--------~~~~~d 422 (422) T protein:vir:10 375 AAGAMDIDEARDTLRTIAPE------VKINDGSVETEVTISE--------TSNDPL--------EVPTDD 422 (422) T ss_pred hcCCCCHHHHHHHhhhhccc------ccCCCCCCccccchhh--------cCCCCC--------CCCCCC Confidence 99999999999998432211 1111111111100000 000000 000010 No 128 >protein:vir:79511 Length: 448 # NCBI annotation: portal protein # Family: family:all:2372 # MgeID: mge:1870 # MgeName: P74-26 # Cross-refs: genbank:acc:YP_001468055;genbank:gi:157265497;genbank:GeneID:5600628 Probab=99.84 E-value=2.1e-20 Score=128.42 Aligned_cols=408 Identities=13% Similarity=0.051 Sum_probs=229.0 Q ss_pred CCCCCCCccc---cccccc----hhh---hhhhccCccCCcc------cC---ccchhhHHHHhhhHHHHHHHHHHHHhh Q lcl|Aclame:pro 3 LANGQTLSAP---AMAELS----PQM---QDSYYYAPAVGMQ------LE---RQFSLYGGIYKNQPWVRTVIAKRAQAL 63 (518) Q Consensus 3 f~~~~~~~~~---~~~~~~----~~~---~~~~~~~~~~~~~------~~---~~~~~~~~~~~~~~~v~~~v~~ia~~i 63 (518) |.++...+.+ ..+... +.+ ...+...+..|.- +- .+..++.++. ..+.|.+|++.+...| T Consensus 1 m~k~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~iLr~~~~~~ly~~m~-~D~hi~s~l~~Rk~av 79 (448) T protein:vir:79 1 MAKRGRKPKELVPGPGSIDPSDVPKLEGASVPVMSTSYDVVVDREFDELLQGKDGLLVYHKML-SDGTVKNALNYIFGRI 79 (448) T ss_pred CCCCCCCCccccCcccccccccchhhhhhhhhhcccccccccccchhHhhccccchHHHHHHh-hChHHHHHHHHHHHHH Confidence 5554444422 111111 101 1111222222211 11 1233455554 5899999999999999 Q ss_pred ccCceEEEEecCCceeeecchHHHHHhhccCc---cCCHHHHHHHHHHHHHHcCCeeEEeeeCC--CCc--eeeeeeeCC Q lcl|Aclame:pro 64 ARLPVKCMFTSGDTETEEHDTGYAKLLADPCE---YLDPFAFWEWVASTLDIYGETYLAIQKNK--SGT--PEKLMPMHP 136 (518) Q Consensus 64 a~lp~~v~~~~~~~~~~~~~~~~~~l~~~PN~---~~t~~~f~~~~~~~~ll~G~~~~~i~~~~--~G~--~~~l~~l~p 136 (518) .+++|.|...+++.........+...+..++. ..++.+++..+ .+.+.+|.+++++++.. +|. +..|.+.++ T Consensus 80 ~~~~w~v~p~~~~~~~~~~ae~v~~~l~~~~~~~~~~~f~~~~~~~-lda~~~G~s~~Eivw~~~~~g~~~~~~l~~r~~ 158 (448) T protein:vir:79 80 RSAKWYVEPASTDPEDIAIAAFIHAQLGIDDASVGKYPFGRLFAIY-ENAYIYGMAAGEIVLTLGADGKLILDKIVPIHP 158 (448) T ss_pred hcCCceEecCCCCHHHHHHHHHHHHHhhhhhhhhccCCHHHHHHHH-HHhhhhcceeEEEEeeecCCCceecccccccCC Confidence 99999997543322211122233444444433 23566666654 45778999999999863 454 445666676 Q ss_pred cceE-EEeccCcceEEEEeecc---CCCCceeEEEeeeeeEEeecCCCCcccccchHHHHHHHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 137 SRVA-IKRNSRTGRYEYYFQAG---AGVGTQLVSFADDEVVPIRFFNPDGLERGLSLMESLKSTIFSEDSSRNATAAMWK 212 (518) Q Consensus 137 ~~v~-~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ 212 (518) ..+. +..+.+++......... .......+.+|...++|+.+ ...+..+|.+.+..++..+.......++...|.+ T Consensus 159 ~~~~~f~~~~d~~l~~~~~~~~~~~~~~~~~~~~lP~~~~i~~~~-~~~g~p~g~gLlr~~~w~~~fK~~~~~~w~~f~E 237 (448) T protein:vir:79 159 FNIDEVLYDEEGGPKALKLSGEVKGGSQFVSGLEIPIWKTVVFLH-NDDGSFTGQSALRAAVPHWLAKRALILLINHGLE 237 (448) T ss_pred ccccceeeecCCceEEeecCCcccccccCCCccccccceEEEEec-CccCCcccchhHHHHHHHHHHHHHHHHHHHHHHH Confidence 6443 23333443332221110 00111234567788888865 4567789999999999999999999999999999 Q ss_pred ccCCcceeeeeCCcCC--HHHHHHHHHHHHHHhcCccccccceeccCCcccccccCChhhHHHHHHHHHHHHHHHHHhcc Q lcl|Aclame:pro 213 NAGRPNLVLRHEKRLS--PEAQQRLREQFDRAHAGSSNTGKTMVVEEGMEPIPLQLTAVEMQFIEARQLNREEVCGVYDI 290 (518) Q Consensus 213 ng~~p~gil~~~~~~~--~e~~~~~~~~~~~~~~g~~n~g~~~vl~~g~~~~~~~~~~~d~q~~e~~~~~~~~Ia~~fgV 290 (518) .-|.|--+.+++.+.+ +++++.+.+...+...|. ++ .+|++.|++++-+........+.+..++..++|+.+.- T Consensus 238 ~yG~P~~vgky~~ga~~~~~~~~~l~~av~~i~~g~-~a--~~iiP~~~~ie~~ea~~~~~~~~~~i~~~d~~Isk~iL- 313 (448) T protein:vir:79 238 RFMIGVPTLTIPKSVRQGTKQWEAAKEIVKNFVQKP-RH--GIILPDDWKFDTVDLKSAMPDAIPYLTYHDAGIARALG- 313 (448) T ss_pred HcCCceEEEecCCCCCcCHHHHHHHHHHHHHHhcCC-ce--EEEecCCceEEEEecCCCcccHHHHHHHHHHHHHHHHh- Confidence 9999998989887655 456667766666654442 33 37789998877666555555577788888888887752 Q ss_pred chHhhccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHhhhcchhh-----cc--c-eeeechhhhhccCHHHHHHHH Q lcl|Aclame:pro 291 APPIVHILDRATFSNISAQMRAFYRDTMAIPIARIQSAMDKYVGQYWV-----RK--N-RMKFDIDDVIQPDWEAKSEST 362 (518) Q Consensus 291 pp~~lg~~~~~~~s~~e~~~~~~~~~~l~P~~~~ie~~ln~~l~~~~~-----~~--~-~~~fd~~~l~~~d~~~~~~~~ 362 (518) -..+-...+.++++...........+.+.-.++.|+..||+.|++..- .. + .++|+ .....|.+..++.+ T Consensus 314 GqtlTs~~~~g~~~~~~~~~~~v~~~~~~aDa~~i~~tln~~li~~l~~lNfg~~~~~P~~~f~--~~e~~Dl~~~a~~~ 391 (448) T protein:vir:79 314 IDFNTVQLNMGVQAINIGEFVSLTQQTIISLQREFASAVNLYLIPKLVLPNWPSATRFPRLTFE--MEERNDFSAAANLM 391 (448) T ss_pred hhhhccccccchhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcCCCcEEEec--CCChHHHHHHHHHh Confidence 111111111122222222233456677888999999999998776431 11 1 34454 44567888899999 Q ss_pred HHHHhCCCcCHHHHHHHHhCCCCCCccCceeeecccccccccccccCCCCCCCCCCCCcccCCCCCccCCccccccccCh Q lcl|Aclame:pro 363 QKMVNSGVATPNEGREIMGLPRSDDPKADELYANSALQPLGATPDGAVEGEEAPAPKRPASTPVASLDQSPPASVPGLSP 442 (518) Q Consensus 363 ~~~~~~g~~T~NE~R~~~g~~pi~~~~gD~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 442 (518) .+++..+-..-+-+|+.+|+|.-. |+ +... + + . ...+......+|+ ++ T Consensus 392 ~~l~~~~~~~~~~~~~~~~~p~~~-~~-~~~~---a--~----~---~~~~~~~~~~~~~-----------------~~- 439 (448) T protein:vir:79 392 GMLINAVKDSEDIPTELKALIDAL-PS-KMRR---A--L----G---VVDEVREAVRQPA-----------------DS- 439 (448) T ss_pred hhhhccchhhHHHHHHhhcCCCCC-CC-cccc---c--c----C---CCCcccccccCCc-----------------cc- Confidence 999877654444467777776321 11 1100 0 0 0 0000000000000 00 Q ss_pred hhhcchhHHHHHH Q lcl|Aclame:pro 443 TNSDRSTDSGKTE 455 (518) Q Consensus 443 ~~~~~~~~~~~~~ 455 (518) +....+.+. T Consensus 440 ----~~~~~~~~~ 448 (448) T protein:vir:79 440 ----RYLYTRRRR 448 (448) T ss_pred ----cchhhcccC Confidence 011111110 No 129 >protein:vir:77981 Length: 448 # NCBI annotation: portal protein # Family: family:all:2372 # MgeID: mge:1843 # MgeName: P23-45 # Cross-refs: genbank:acc:YP_001467939;genbank:gi:157265380;genbank:GeneID:5600471 Probab=99.83 E-value=2.2e-20 Score=128.33 Aligned_cols=407 Identities=11% Similarity=0.034 Sum_probs=230.9 Q ss_pred CCCCCCCccc---cccccchh-------hhhhhccCccCCccc---------CccchhhHHHHhhhHHHHHHHHHHHHhh Q lcl|Aclame:pro 3 LANGQTLSAP---AMAELSPQ-------MQDSYYYAPAVGMQL---------ERQFSLYGGIYKNQPWVRTVIAKRAQAL 63 (518) Q Consensus 3 f~~~~~~~~~---~~~~~~~~-------~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~v~~~v~~ia~~i 63 (518) |++|...+.+ ..+...+. ....+...+..|... ..+..++.++. ..+.|.+|++.+...| T Consensus 1 m~kk~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~iLr~~~~~~ly~~m~-~D~hi~s~l~~Rk~av 79 (448) T protein:vir:77 1 MAKRGRKPKELVPGPGSIDPSDVPKLEGASVPVMSTSYDVVVDREFDELLQGKDGLLVYHKML-SDGTVKNALNYIFGRI 79 (448) T ss_pred CCCCCCCCcccCCcccccchhhhhhhccchhhhcccccccccccchhHhhccccchHHHHHHh-hChHHHHHHHHHHHHH Confidence 6776665532 21111111 111111112212111 11234555554 5899999999999999 Q ss_pred ccCceEEEEecCCceeeecchHHHHHhhccC---ccCCHHHHHHHHHHHHHHcCCeeEEeeeCC--CCc--eeeeeeeCC Q lcl|Aclame:pro 64 ARLPVKCMFTSGDTETEEHDTGYAKLLADPC---EYLDPFAFWEWVASTLDIYGETYLAIQKNK--SGT--PEKLMPMHP 136 (518) Q Consensus 64 a~lp~~v~~~~~~~~~~~~~~~~~~l~~~PN---~~~t~~~f~~~~~~~~ll~G~~~~~i~~~~--~G~--~~~l~~l~p 136 (518) .+++|.|...+++.........+...+..+. ...++.+++..+ .+.+.+|-++.++++.. +|. +..|.+.++ T Consensus 80 ~~~~w~v~p~~~~~~d~~~ae~v~~~l~~~~~~~~~~~f~~~i~~~-lda~~~G~s~~Eivw~~~~dg~~~~~~l~~r~~ 158 (448) T protein:vir:77 80 RSAKWYVEPASTDPEDIAIAAFIHAQLGIDDASVGKYPFGRLFAIY-ENAYIYGMAAGEIVLTLGADGKLILDKIVPIHP 158 (448) T ss_pred hcCCceEecCCCCHHHHHHHHHHHHHhhchhhhhccCCHHHHHHHH-HHhhhhcceeEEEEEeecCCCceeeccccccCC Confidence 9999999764333222222223333443332 234677788776 57889999999999863 454 346667677 Q ss_pred cceEE-EeccCcceEEEEeeccCC----CCceeEEEeeeeeEEeecCCCCcccccchHHHHHHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 137 SRVAI-KRNSRTGRYEYYFQAGAG----VGTQLVSFADDEVVPIRFFNPDGLERGLSLMESLKSTIFSEDSSRNATAAMW 211 (518) Q Consensus 137 ~~v~~-~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~ 211 (518) ..+.. ..+.+++... ....... .......+|...++|..+. ..+..+|.+.+..++..+.......++...|. T Consensus 159 ~~~~~f~~~~~~~l~~-~~~~~~~~~~~~~~~~~~lP~~~~i~~~~~-~~g~p~g~gLlr~~~w~~~fK~~~~~~w~~f~ 236 (448) T protein:vir:77 159 FNIDEVLYDEEGGPKA-LKLSGEVKGGSQFVNGLEIPIWKTVVFLHN-DDGSFTGQSALRAAVPHWLAKRALILLINHGL 236 (448) T ss_pred CccceeeeecCCceEE-EecCCcccccccCCCccccccceEEEEecC-CcCCcccchHHHHHHHHHHHHHhhHHHHHHHH Confidence 55432 2333333322 2111111 1122345688888888764 55778999999999999999999999999999 Q ss_pred HccCCcceeeeeCCcCC--HHHHHHHHHHHHHHhcCccccccceeccCCcccccccCChhhHHHHHHHHHHHHHHHHHhc Q lcl|Aclame:pro 212 KNAGRPNLVLRHEKRLS--PEAQQRLREQFDRAHAGSSNTGKTMVVEEGMEPIPLQLTAVEMQFIEARQLNREEVCGVYD 289 (518) Q Consensus 212 ~ng~~p~gil~~~~~~~--~e~~~~~~~~~~~~~~g~~n~g~~~vl~~g~~~~~~~~~~~d~q~~e~~~~~~~~Ia~~fg 289 (518) +.-|.|--+.+++.+.+ +++++.+.+...+...| .++ .+|++.|++++-+........+.+..++..++|+.+.. T Consensus 237 E~yG~P~~vgky~~ga~~~~~~~~~l~~av~~i~~g-~~a--~~iiP~g~~ie~~ea~~~~~~~~~~i~~~d~~Isk~iL 313 (448) T protein:vir:77 237 ERFMIGVPTLTIPKSVRQGTKQWEAAKEIVKNFVQK-PRH--GIILPDDWKFDTVDLKSAMPDAIPYLTYHDAGIARALG 313 (448) T ss_pred HHcCCceeEEecCCCCCCCHHHHHHHHHHHHHHhcC-Cce--EEEecCCceEEEEecCCCccCHHHHHHHHHHHHHHHHh Confidence 99999999999887654 45666777666664434 233 37788898877665544445577788888888888752 Q ss_pred cchHhhccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHhhhcchh-----hc--cc-eeeechhhhhccCHHHHHHH Q lcl|Aclame:pro 290 IAPPIVHILDRATFSNISAQMRAFYRDTMAIPIARIQSAMDKYVGQYW-----VR--KN-RMKFDIDDVIQPDWEAKSES 361 (518) Q Consensus 290 Vpp~~lg~~~~~~~s~~e~~~~~~~~~~l~P~~~~ie~~ln~~l~~~~-----~~--~~-~~~fd~~~l~~~d~~~~~~~ 361 (518) - ..+--..+.++++.............+.-.++.|++.||+.|++.. +. .+ .+.|+ .....|.+..++. T Consensus 314 G-qtlTs~~~~g~~~~~~~~~~~v~~~~~~aDa~~i~~tln~~Li~~l~~lNfg~~~~~P~~~f~--~~e~eDl~~~a~~ 390 (448) T protein:vir:77 314 I-DFNTVQLNMGVQAVNIGEFVSLTQQTIISLQREFASAVNLYLIPKLVLPNWPGATRFPRLTFE--MEERNDFSAAANL 390 (448) T ss_pred c-cccccccccchhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCEEEec--CCChhhHHHHHHH Confidence 2 2221111222233333333346677788899999999999887643 11 11 45555 4456788888888 Q ss_pred HHHHHhCCCcCHHHHHHHHhCCCCCCccCceeeecccccccccccccCCCCCCCCCCCCcccCCCCCccCCccccccccC Q lcl|Aclame:pro 362 TQKMVNSGVATPNEGREIMGLPRSDDPKADELYANSALQPLGATPDGAVEGEEAPAPKRPASTPVASLDQSPPASVPGLS 441 (518) Q Consensus 362 ~~~~~~~g~~T~NE~R~~~g~~pi~~~~gD~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 441 (518) +.+++ +-+|+.+|+|.-.+ ++ .. + .+.++... ....+++.++ T Consensus 391 ~~~l~-------~~~~~~~~ip~~~~-~~---~~-----~---------------~~~~~~~~-~~~~~~~~~~------ 432 (448) T protein:vir:77 391 MGMLI-------NAVKDSEDIPTELK-AL---ID-----A---------------LPSKMRRA-LGVVDEVREA------ 432 (448) T ss_pred hHHHH-------HHHHHHhcCCccCC-cC---CC-----C---------------Cchhcccc-cCCCCCCCch------ Confidence 88876 34899999864211 10 00 0 00000000 0000011100 Q ss_pred hhhhcchhHHHHHHHHHH Q lcl|Aclame:pro 442 PTNSDRSTDSGKTEPRRL 459 (518) Q Consensus 442 ~~~~~~~~~~~~~~~~~~ 459 (518) .+.-...+....++|. T Consensus 433 --~~~~~~~~~~~~r~~~ 448 (448) T protein:vir:77 433 --VRQPADSRYLYTRRRR 448 (448) T ss_pred --hhcchhhHHHHhhhcC Confidence 0000011111111110 No 130 >protein:vir:95542 Length: 548 # NCBI annotation: Putative portal protein # Family: family:all:47 # MgeID: mge:1574 # MgeName: F10 # Cross-refs: genbank:acc:YP_001293348;genbank:gi:148912769;genbank:GeneID:5228194 Probab=99.82 E-value=2.8e-21 Score=133.26 Aligned_cols=454 Identities=9% Similarity=0.005 Sum_probs=241.4 Q ss_pred CCCCCCCCCccccccccc---hhhhhhhccC----------------ccCCcccCccchhhHHHHhhhHHHHHHHHHHHH Q lcl|Aclame:pro 1 MLLANGQTLSAPAMAELS---PQMQDSYYYA----------------PAVGMQLERQFSLYGGIYKNQPWVRTVIAKRAQ 61 (518) Q Consensus 1 ~~f~~~~~~~~~~~~~~~---~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~v~~~v~~ia~ 61 (518) -+|-+-...-+|..+... ......|.+. ...........+..++++.+|+++..+|+.+.. T Consensus 2 n~iDr~i~~~sP~~a~~R~~ar~~~~~y~aa~~~r~~~~~~~~~s~~~~i~~~~~~lr~RaRdL~rNn~~a~~av~~~~~ 81 (548) T protein:vir:95 2 NLIDRLLEPLAPELVARRLAAREAIQAYEAARPGRTHKAKRQPLGADTSLQKSAVSMREQCRKLDEDHDLVTGLLDRLEE 81 (548) T ss_pred chHHhHhhhcchHHHHHHHHhHHHhccccccCccccccccCCCCChHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHHHH Confidence 111111111111100000 0000001000 000011122344567899999999999999877 Q ss_pred hhcc-CceEEEEe--cCCce--eeecc--hHHH-HHhhcc--CccCCHHHHHHHHHHHHHHcCCeeEEeeeCCCC----- Q lcl|Aclame:pro 62 ALAR-LPVKCMFT--SGDTE--TEEHD--TGYA-KLLADP--CEYLDPFAFWEWVASTLDIYGETYLAIQKNKSG----- 126 (518) Q Consensus 62 ~ia~-lp~~v~~~--~~~~~--~~~~~--~~~~-~l~~~P--N~~~t~~~f~~~~~~~~ll~G~~~~~i~~~~~G----- 126 (518) .|.. ..+.+..+ ..+.. .+... ..++ .+..++ ...++++++...++..++..|++|+.+.+...+ T Consensus 82 nvVG~~G~~i~p~~l~~d~~~a~~l~~~ie~~w~~Wa~~~D~~g~~~f~~lq~l~~R~~~~dGE~f~~~~~~~~~~~~~g 161 (548) T protein:vir:95 82 RVVGGSGIGVEPLPLRLDGSVHAELAMEIRSAWAEWSLSPETSGELTRPQVERLMCRTWLRDGEGLAQKLMGRVPNYTFA 161 (548) T ss_pred hccCccccceeeeecCCCHHHHHHHHHHHHHHHHHhhcCccccccCCHHHHHHHHHHHHHhCCceEEEeeecccccccCC Confidence 7764 23333322 11111 11101 1111 222222 235789999999999999999999988765432 Q ss_pred --ceeeeeeeCCcceE-------------EEeccCcceEEEEeeccCCC-------CceeEEEeeeeeEEeecCCCCccc Q lcl|Aclame:pro 127 --TPEKLMPMHPSRVA-------------IKRNSRTGRYEYYFQAGAGV-------GTQLVSFADDEVVPIRFFNPDGLE 184 (518) Q Consensus 127 --~~~~l~~l~p~~v~-------------~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~vih~~~~~~~~~~ 184 (518) .+..|..|+|+++. |..+..|..+.|++....+. ....+.+++++|||+..+...++. T Consensus 162 ~~~~~~lqliepd~l~~~~~~~~~~i~~GIE~D~~Grp~aY~i~~~hPgd~~~~~~~~~~~rvpA~~VlHif~~~r~gQ~ 241 (548) T protein:vir:95 162 TSVPFALELLEPDYLPFSYNNLSKGIVQGIERDTWRRKRAYHLLKDHPGNLQTLGGSLAVKRVEAERIIHIAYRKRIGQN 241 (548) T ss_pred cccceEEEEechhhcCCCCCCCCCceeeeeEECCCCceEEEEEeecCCCcccccccccceeeechhHheecccccCCccc Confidence 35678888887764 34455666778887654332 224567999999999999888999 Q ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHccCCcceeeeeCCcCCHHHHHHHHHHHHHHhcCccccccc-eeccCCccccc Q lcl|Aclame:pro 185 RGLSLMESLKSTIFSEDSSRNATAAMWKNAGRPNLVLRHEKRLSPEAQQRLREQFDRAHAGSSNTGKT-MVVEEGMEPIP 263 (518) Q Consensus 185 ~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~p~gil~~~~~~~~e~~~~~~~~~~~~~~g~~n~g~~-~vl~~g~~~~~ 263 (518) +|+|.+..+...+......++....-.+-.+...++|+.+....... ...... ....-.-..|.+ ..|..|.+++. T Consensus 242 RGvs~lapvl~~l~~l~~y~dael~~aki~A~~a~fi~~~~~~~~~~-~~~~~~--~~~~~~~~pG~iv~~L~pGe~i~~ 318 (548) T protein:vir:95 242 RGVPMLHAVLIRLADLKDYEESERVAARISAALAMYIKKGNPDSYTV-EPGKDR--KNRTIPIAPGMVFDDLEPGEDVGM 318 (548) T ss_pred cCcchHHHHHHHHHHHhHHHHHHHHHHHHhhhheeeeecCCCccccC-CCCccc--ccccccccCCccccccCCCceeee Confidence 99999999999999999999998888888888999988764321110 000000 000001124554 35888988888 Q ss_pred ccCChhhHHHHHHHHHHHHHHHHHhccchHhhc-cccccccccHHHHHHHH-----------HHHHHHHHHHH-HHHHHH Q lcl|Aclame:pro 264 LQLTAVEMQFIEARQLNREEVCGVYDIAPPIVH-ILDRATFSNISAQMRAF-----------YRDTMAIPIAR-IQSAMD 330 (518) Q Consensus 264 ~~~~~~d~q~~e~~~~~~~~Ia~~fgVpp~~lg-~~~~~~~s~~e~~~~~~-----------~~~~l~P~~~~-ie~~ln 330 (518) .+.+.....|.++.+.+.+.||+.+|||.+.|- +. +.|||+..+....| +..-++|+... ++.++- T Consensus 319 ~~p~~p~~~~~~f~~~~lr~IAaglGipYe~ltgD~-s~nYSS~R~~l~e~~r~~~~~q~~~i~~~~~Pi~~~wle~a~l 397 (548) T protein:vir:95 319 IESNRPNPFLEGFRNGQLRMIGAGTRSTYSSVSRAY-DGTYSAQRQELVEGWLGYDLLQHEFIDYWCRPVYRSWLQMYLL 397 (548) T ss_pred cCCCCCCCCHHHHHHHHHHHHHhhcCCCHHHHhccc-chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Confidence 877666788999999999999999999987664 54 46888876554433 34444553333 344443 Q ss_pred hhhcc--hh-hcc--ceeeechhhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHHhCCCCCC--------ccCceeeecc Q lcl|Aclame:pro 331 KYVGQ--YW-VRK--NRMKFDIDDVIQPDWEAKSESTQKMVNSGVATPNEGREIMGLPRSDD--------PKADELYANS 397 (518) Q Consensus 331 ~~l~~--~~-~~~--~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~T~NE~R~~~g~~pi~~--------~~gD~~~~~~ 397 (518) ...++ .. .+. +.+++-.-.....|+.+.++....++.+|+.|.-|+-.+.|.++-+. .-.+++-++. T Consensus 398 ~G~i~lP~~~~~~~~~~~~W~~P~~~~iDP~Kea~A~~~~i~~Gl~T~~~~~a~~G~D~~ev~~q~a~E~~~~~~~GL~~ 477 (548) T protein:vir:95 398 ARKERLPADVDHRTLYAAVYQGPVMPWINPMHEANAWELLVKAGFADEAEVARARGRDPRELKKSRETEIKANRAAGLVF 477 (548) T ss_pred cCCcCCCCCCCchhheeeeeecCCccccChHHHHHHHHHHHHcCCCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCC Confidence 33322 11 111 12223233456679999999999999999999999877788776320 0011111111 Q ss_pred cccccccccc----cCCCCCCCCCCCCcccCCCCCccCCccccccccC---hh---hhcchhHHHHHHHHHHhhccCcch Q lcl|Aclame:pro 398 ALQPLGATPD----GAVEGEEAPAPKRPASTPVASLDQSPPASVPGLS---PT---NSDRSTDSGKTEPRRLMQKPPPKE 467 (518) Q Consensus 398 n~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~---~~~~~~~~~~~~~~~~~~k~~~~~ 467 (518) ...|...... ..+..+. ...+.....+..+.++..+....+.+ ++ ++......+ .|...+ T Consensus 478 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~ 547 (548) T protein:vir:95 478 SSDAYHQLVKSGMDPVEAVQK-VYLGVGKMLTADEARELVNRYGAGLPVPGPDFPNESNNGGADG---------QPSNPD 547 (548) T ss_pred CCcccccccccccCCCCchhh-hccccccccccchhHHhhccCCCCCcCCCCCCCcccccCCCCC---------CCCCCC Confidence 1111111100 0000000 00000000011111111111111110 00 000000000 011111 Q ss_pred h Q lcl|Aclame:pro 468 S 468 (518) Q Consensus 468 ~ 468 (518) - T Consensus 548 ~ 548 (548) T protein:vir:95 548 P 548 (548) T ss_pred C Confidence 1 No 131 >protein:vir:98816 Length: 446 # NCBI annotation: hypothetical protein # Family: family:all:32558 # MgeID: mge:1530 # MgeName: Ma-LMM01 # Cross-refs: genbank:acc:YP_851097;genbank:gi:117530254;genbank:GeneID:4484480 Probab=99.81 E-value=2.8e-20 Score=127.77 Aligned_cols=376 Identities=14% Similarity=0.098 Sum_probs=224.5 Q ss_pred CCCCCCCCCcccc-cccc--chhhhhhhcc-Cc---cCCcccCccchhhHHHHhhhHHHHHHHHHHHHhhccCceEEEEe Q lcl|Aclame:pro 1 MLLANGQTLSAPA-MAEL--SPQMQDSYYY-AP---AVGMQLERQFSLYGGIYKNQPWVRTVIAKRAQALARLPVKCMFT 73 (518) Q Consensus 1 ~~f~~~~~~~~~~-~~~~--~~~~~~~~~~-~~---~~~~~~~~~~~~~~~~~~~~~~v~~~v~~ia~~ia~lp~~v~~~ 73 (518) |=++..+.+.-.. .... ..-+...+.. .+ ..|..+.....++.++..+.+.|.+|++.+...|.+++|.|... T Consensus 3 ~~~~~~p~~~~~~~~~~~~~~~~~~~g~~~~D~~lr~~gg~~~~~~~l~~~m~e~D~~v~s~l~~Rk~av~~~~w~V~p~ 82 (446) T protein:vir:98 3 MEVRNAPTPAIRRRTIYAMEHLGLATSYLSEDGGYKRAGKPTYQQLSAWDEAAQTEPIIAQGLDSIALSVLNKVGPYQHG 82 (446) T ss_pred ccccCCCchhhhhhhhhccccchhhcccCCcchHhhhcCCChHHHHHHHHHHHhcchHHHHHHHHHHHHhhcCCceecCc Confidence 5555544331110 0000 0000000100 00 01111111225666777789999999999999999999999653 Q ss_pred cCCceeeecchHHHHHhhccCccCCHHHHHHHHHHHHHHcCCeeEEeeeCCCC---cee----eeeeeCCcceEEEeccC Q lcl|Aclame:pro 74 SGDTETEEHDTGYAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQKNKSG---TPE----KLMPMHPSRVAIKRNSR 146 (518) Q Consensus 74 ~~~~~~~~~~~~~~~l~~~PN~~~t~~~f~~~~~~~~ll~G~~~~~i~~~~~G---~~~----~l~~l~p~~v~~~~~~~ 146 (518) + .+ ....+..++... . .++....+.+.+.+|.++.|+++...+ .+. .+....|..+....+.+ T Consensus 83 ~----~~-~a~~v~~~l~~~----~-~~~~~~~~ldai~~G~s~~Eivw~~~~g~~~p~~~~d~~~~~~~~~~r~~~~~~ 152 (446) T protein:vir:98 83 D----KR-IKKFIDDQLRNR----A-KTWISHCVKSIMTYGFSLSEQIYAHGARDNMPATVLDDIVNYHPLQVMLIANDN 152 (446) T ss_pred c----HH-HHHHHHHHHhhc----C-chhHHHHHHHHHhhCceeeeEEEeecccccccchhhccccccccccceeeeccC Confidence 2 11 112233344322 1 244444577899999999999997532 111 11122222222222222 Q ss_pred cceEEEE------e----------------eccCCCCceeEEEeeeeeEEeecCCCCcccccchHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 147 TGRYEYY------F----------------QAGAGVGTQLVSFADDEVVPIRFFNPDGLERGLSLMESLKSTIFSEDSSR 204 (518) Q Consensus 147 ~~~~~~~------~----------------~~~~~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~ 204 (518) +...... + .......+..+.+|...++|+++....+.+||.|.+..++..+....... T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~iP~~kfi~~~~~~~~~~p~G~gLlr~~~w~~~fK~~~~ 232 (446) T protein:vir:98 153 GRIVDGDTVTASQYKSGYWVPLPPYRIGDPPKKVDVVGSHVRLPSHKRLFINYNTKGNNPWGTSCLTSVLDYSIFKRAFR 232 (446) T ss_pred CccccccccchhhcccccccCcccchhhhhhhhcccCcccccccccceEEEEecCCCCCccccchHHHHHHHHHHHHhhH Confidence 1111000 0 00001123345688889999999888888999999999999999999999 Q ss_pred HHHHHHHHccCCcceeeeeCCcCCHHHH---------HHHHHHHHHHhcCcc-ccccce---eccCCcccccccCChh-h Q lcl|Aclame:pro 205 NATAAMWKNAGRPNLVLRHEKRLSPEAQ---------QRLREQFDRAHAGSS-NTGKTM---VVEEGMEPIPLQLTAV-E 270 (518) Q Consensus 205 ~~~~~~~~ng~~p~gil~~~~~~~~e~~---------~~~~~~~~~~~~g~~-n~g~~~---vl~~g~~~~~~~~~~~-d 270 (518) ++...|.+.-|.|--+.+++.+.++++. +...+.+.+++.... +++.++ +++.|++++-++.... . T Consensus 233 ~~w~~f~E~yG~P~~vGkyp~ga~~~~~~~~~~~~~~~~~~~~L~~av~~~~~da~~ii~~~~~P~g~eie~~ea~~~~~ 312 (446) T protein:vir:98 233 DMMLIALDRYGTPLIYVIVPPGNTGVVEEAPDGTEITTTIAEQAEDALRRLSTDSGLVLTQLSKEQPVQVGALTTGNNFS 312 (446) T ss_pred HHHHHHHhHcCCceeEEeecCCCCcccccchhHHHHHHHHHHHHHHHHHhccccceeeeecccCCCCceEEeeccccCCh Confidence 9999999999999999999876653322 122233444443322 222222 2488988876544322 2 Q ss_pred HHHHHHHHHHHHHHHHHhccchHhhccccc--cccccHHHHHHHHHHHHHHHHHHHHHHHHHhhhcchhhcc-------- Q lcl|Aclame:pro 271 MQFIEARQLNREEVCGVYDIAPPIVHILDR--ATFSNISAQMRAFYRDTMAIPIARIQSAMDKYVGQYWVRK-------- 340 (518) Q Consensus 271 ~q~~e~~~~~~~~Ia~~fgVpp~~lg~~~~--~~~s~~e~~~~~~~~~~l~P~~~~ie~~ln~~l~~~~~~~-------- 340 (518) ..|.+..++..++|+.+.....-.+|...+ ++++-.+. ......+.+.-.++.|++.||+.|+...-.- T Consensus 313 ~~~~~~i~~~d~~IskaiLg~~Ltl~~~~~~~GS~ala~v-h~~V~~d~~~aDa~~i~~tln~~Li~~l~~lNf~~~~~~ 391 (446) T protein:vir:98 313 DSFERAISLCDNNMLMGMGIPNLLVQNRETTFGTGRASEI-QLELFDGKINSIFDTVIHAFTEQVIGNLIRLNFDPALYP 391 (446) T ss_pred hhHHHHHHHHHHHHHHHHhcccccccccccccchhhhHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccccc Confidence 348888899999999987665544553322 33333333 3345667788899999999999886543210 Q ss_pred -----ceeeechhhhhccCHHHHHHHHHHHHhCCCcCH---HHHHHHHhCCCCCCcc Q lcl|Aclame:pro 341 -----NRMKFDIDDVIQPDWEAKSESTQKMVNSGVATP---NEGREIMGLPRSDDPK 389 (518) Q Consensus 341 -----~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~T~---NE~R~~~g~~pi~~~~ 389 (518) ..++|++. ...|.+..++.++++++.|++++ +.+|+++|+|+-+..- T Consensus 392 ~~~~~~~~~~~~~--e~eDl~~~a~~~~~L~~~G~~~p~~~~~ire~~giP~~~~~~ 446 (446) T protein:vir:98 392 LASNTGYITRLPG--RATDLAALVEAIKQMHDMGFLVDGDKDHIRSITGLPDAISST 446 (446) T ss_pred cccccccceeccC--ChhhHHHHHHHHHHHHhCCccccccHHHHHHHhCcCCCCCCC Confidence 12334433 46788999999999999998765 4599999998765321 No 132 >protein:vir:95254 Length: 488 # NCBI annotation: Phage conserved protein # Family: family:all:2372 # MgeID: mge:1561 # MgeName: Felix 01 # Cross-refs: genbank:acc:NP_944885;genbank:gi:158267601;genbank:GeneID:2744039 Probab=99.81 E-value=4.6e-19 Score=121.12 Aligned_cols=421 Identities=12% Similarity=0.060 Sum_probs=221.8 Q ss_pred CCCCCCCccccccccchhhhhhhccCc-cCCcc----------cCccchhhHHHHhhhHHHHHHHHHHHHhhccCceEEE Q lcl|Aclame:pro 3 LANGQTLSAPAMAELSPQMQDSYYYAP-AVGMQ----------LERQFSLYGGIYKNQPWVRTVIAKRAQALARLPVKCM 71 (518) Q Consensus 3 f~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~----------~~~~~~~~~~~~~~~~~v~~~v~~ia~~ia~lp~~v~ 71 (518) |+- +...+.+.....+.+.+.... ..+.. ......+|.++. +.+.|.+|++.+...|.+++|.|. T Consensus 1 ~~~---~~~~~~gl~p~rl~~i~~~~~~~~~~~~~~~~~~~Lr~~~~~~ly~~m~-~D~hi~s~l~~Rk~av~~~~w~v~ 76 (488) T protein:vir:95 1 MAD---ITETQESLPPFRMGEVGSLGLKVKNGRIYEEPRQALRFPESIKTFQLMM-RDPAVAASVNIIKMFVRKVNWRFV 76 (488) T ss_pred CCC---ccccCCCCCHHHHHHHHHHhhccccchhhccchhhhcccchHHHHHHHh-hChHHHHHHHHHHHHHhcCCceEe Confidence 222 222233333333344432111 00101 112345666664 689999999999999999999997 Q ss_pred EecCCceeeecc---hHHHHHhhccCccCCHHHHHHHHHHHHHHcCCeeEEeeeCCC-------------Cc--eeeeee Q lcl|Aclame:pro 72 FTSGDTETEEHD---TGYAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQKNKS-------------GT--PEKLMP 133 (518) Q Consensus 72 ~~~~~~~~~~~~---~~~~~l~~~PN~~~t~~~f~~~~~~~~ll~G~~~~~i~~~~~-------------G~--~~~l~~ 133 (518) ..++........ ..+..++. |...++.+++..+. +.+.+|-++.++++... |. +..+.+ T Consensus 77 p~~~~~~d~~~~~~a~~v~~~l~--~~~~~~~~~i~~~l-da~~~G~s~~Eivw~~~~~~~~~~~~~~~dg~~~~~~i~~ 153 (488) T protein:vir:95 77 PPKGKEQDPKMLERADFFNSLMD--DMEHDWADFINSVM-SFCTYGFCVNEKVYKKRQGKKGKYQSKFDDGLIGWAKLPI 153 (488) T ss_pred cCCCCchhHHHHHHHHHHHHHHh--ccCccHHHHHHHHH-HhhcccceeeeeeeeccccccccccccccCCeeeeeeeee Confidence 654322111111 11222222 22345677777765 67889999999999643 32 445555 Q ss_pred eCCcceE-EEeccCcceEEEEeecc-----------CCCCceeEEEeeeeeEEeecCCCCcccccchHHHHHHHHHHHHH Q lcl|Aclame:pro 134 MHPSRVA-IKRNSRTGRYEYYFQAG-----------AGVGTQLVSFADDEVVPIRFFNPDGLERGLSLMESLKSTIFSED 201 (518) Q Consensus 134 l~p~~v~-~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~ 201 (518) .++.+.. ...+.+++......... .......+.+|+...|+.++....+..||.+.+..++..+.... T Consensus 154 Rpq~~~~~f~~d~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~lP~~kfi~~~~~~~~g~p~g~gLlr~~~w~~~fK~ 233 (488) T protein:vir:95 154 RNQSTLDKWYFDEDFRRVTGVRQNLRNVSHIAGAINLGERPLTRKLPRAKFMLFKYDDEYGNPEGRSPLLNAYVPWKYKV 233 (488) T ss_pred cCcccccceeeccCCCceeecccccccccccccccccccccccccccccceEEEeecCCCCccchhhHHHHHHHHHHHHH Confidence 5554322 22333332221110000 00112235578888777777777788899999999999999999 Q ss_pred HHHHHHHHHHHccCCcceeeeeCC----cCCHHHHHHHHHHHHHHhcCc-cccccceeccCCcccc---------cccC- Q lcl|Aclame:pro 202 SSRNATAAMWKNAGRPNLVLRHEK----RLSPEAQQRLREQFDRAHAGS-SNTGKTMVVEEGMEPI---------PLQL- 266 (518) Q Consensus 202 ~~~~~~~~~~~ng~~p~gil~~~~----~~~~e~~~~~~~~~~~~~~g~-~n~g~~~vl~~g~~~~---------~~~~- 266 (518) ...++...|.+..+.|--+...+. ..++++...+.+...+..... .+...-++++.|+... .++. T Consensus 234 ~~~~~w~~f~Er~g~g~p~~~~p~~~~~~~~~~e~~~l~~a~~~i~~~~~~~~~ag~iiP~g~~~~~k~~~~e~~l~~~~ 313 (488) T protein:vir:95 234 QIEEYEAVGVSRDLVGMPKIGLPPDYLDENAEPEKKAFVQYCKTVVNDMIANDRAGLIWPRYIDPDTKEDIFEFSLVSRQ 313 (488) T ss_pred HHHHHHHHHHHHhcccceeEeeccCCCCCcccHHHHHHHHHHHHHHHHhhccchhheeeccccccccchhhhhhhccccc Confidence 999999999998766666665543 234444544544544432111 1111235667665432 2222 Q ss_pred ChhhHHHHHHHHHHHHHHHHHhccchHhhccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHhhhcchhh------cc Q lcl|Aclame:pro 267 TAVEMQFIEARQLNREEVCGVYDIAPPIVHILDRATFSNISAQMRAFYRDTMAIPIARIQSAMDKYVGQYWV------RK 340 (518) Q Consensus 267 ~~~d~q~~e~~~~~~~~Ia~~fgVpp~~lg~~~~~~~s~~e~~~~~~~~~~l~P~~~~ie~~ln~~l~~~~~------~~ 340 (518) ...-..|.+..++..++|+.+.--.---.+....++++. .+.........+.-.++.|++.||+.|++..- .. T Consensus 314 ~~~~~~~~~li~~~d~~Isk~iLGqtLT~~~~~~Gs~Al-~~vh~ev~~~i~~aDa~~i~~tln~~li~~l~~~Nfg~~~ 392 (488) T protein:vir:95 314 GAKAYDTGSIIDRYSKQIMMAFMSDVLAMGQSKYGSFSL-ADSKTSLLAMSVDILLKQIKNVINRDLVAQTYALNMWDDE 392 (488) T ss_pred cCCchhHHHHHHHHHHHHHHHHhccccccccCcchhhhH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCC Confidence 122334667777777888877521110111111223332 23344566678888999999999998776431 12 Q ss_pred ceeeechhhhhccCHHHHHHHHHHHHhCCCcCH-----HHHHHHHhCCCCCCccCceeeecccccccccccccCCCCCCC Q lcl|Aclame:pro 341 NRMKFDIDDVIQPDWEAKSESTQKMVNSGVATP-----NEGREIMGLPRSDDPKADELYANSALQPLGATPDGAVEGEEA 415 (518) Q Consensus 341 ~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~T~-----NE~R~~~g~~pi~~~~gD~~~~~~n~~~~~~~~~~~~~~~~~ 415 (518) .+.+|.++.....|.++.++.+++++..|+.-+ +.+|+.+|+|+-+ .+.....+.. |..... + T Consensus 393 ~~P~~~~~~~e~~Dl~~~ae~~~~L~~~G~~i~~~~~~~~i~e~~gip~~~--~~e~~~~~~~--~~~~~~--------~ 460 (488) T protein:vir:95 393 EHVQITYDDIETPDLEAIGSYIQKTVAVGALEVDKELSNKLREHIGLPPAD--ESQPVSEKLS--PNSQSR--------S 460 (488) T ss_pred CccEEEecCcChhhHHHHHHHHHHHHhCCCccccHHHHHHHHHHhCCCCCC--CCccccccCC--CCCCCC--------C Confidence 223444455667898999999999999998664 5699999998653 2222221110 000000 0 Q ss_pred CCCCCcccCCCCCccCCccccccccChhhhcc Q lcl|Aclame:pro 416 PAPKRPASTPVASLDQSPPASVPGLSPTNSDR 447 (518) Q Consensus 416 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 447 (518) +.... . .........+......+....+ T Consensus 461 ~~~~~---~-~~~~~~~~~~~~~~~~a~~~~~ 488 (488) T protein:vir:95 461 GDGYK---T-AGEGTAKTPSAKDPSTANKANK 488 (488) T ss_pred CcccC---C-CcccCCcccccccchhhhhccC Confidence 00000 0 0000000000000000000000 No 133 >protein:vir:107662 Length: 427 # NCBI annotation: putative portal protein # Family: family:all:297 # MgeID: mge:1518 # MgeName: T1 # Cross-refs: genbank:acc:YP_003893;genbank:gi:45686310;genbank:GeneID:2773002 Probab=99.79 E-value=1.3e-19 Score=124.17 Aligned_cols=376 Identities=10% Similarity=0.072 Sum_probs=200.6 Q ss_pred CCCCCCCCCccccccccchhhhhhhccC-cc--CCcccCccchhhHHHHhhhHHHHHHHHHHHHhhccCceEEEEecCCc Q lcl|Aclame:pro 1 MLLANGQTLSAPAMAELSPQMQDSYYYA-PA--VGMQLERQFSLYGGIYKNQPWVRTVIAKRAQALARLPVKCMFTSGDT 77 (518) Q Consensus 1 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~v~~~v~~ia~~ia~lp~~v~~~~~~~ 77 (518) -+|. .+-..+.+++. .. .+....+..-....+|.+++.++++|+.+|+.+.+..|.+.-. + T Consensus 2 ~~~~-------------~d~~~~~~~~~~~~~~~~~~~~~~~~~l~a~Y~~~~l~~~~Vd~~aed~~r~g~~i~g~---~ 65 (427) T protein:vir:10 2 KIVK-------------HDGYNDIFNGGADGSPKPFFMSDASYHVGSFYNDNATAKRIVDVIPEEMVTAGFKMSGV---K 65 (427) T ss_pred Cccc-------------cchHHHHhhcCCCCcccCccccCchHHHHHHHHcCchhhhhhccchHHhhcCCccccCc---c Confidence 0110 00111111111 00 1111111111234678999999999999999999998887421 1 Q ss_pred eeeecchHHHHHhhccCccCCHHHHHHHHHHHHHHcCCeeEEeee----------CCCCceeeeeeeCCcceEEEecc-- Q lcl|Aclame:pro 78 ETEEHDTGYAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQK----------NKSGTPEKLMPMHPSRVAIKRNS-- 145 (518) Q Consensus 78 ~~~~~~~~~~~l~~~PN~~~t~~~f~~~~~~~~ll~G~~~~~i~~----------~~~G~~~~l~~l~p~~v~~~~~~-- 145 (518) .. ..+...+.+-+ ..+-+...+.+..++|.+++++.- ...|.+..+.++++..|++.... T Consensus 66 ~~----~~~~~~~~~l~----~~~~l~~a~~~~rl~G~a~i~i~v~d~~~l~~p~~~~g~l~~l~v~d~~~~~~~~~~~d 137 (427) T protein:vir:10 66 DE----KEFKSLWDSYK----LDSSLVDLLCWARLYGGAAMVAIIKDNRMLTSQAKPGAKLEGVRVYDRFAITVEKRVTN 137 (427) T ss_pred HH----HHHHHHHHHhh----HHHHHHHHHHhccccceeEEEEEecCCCccccccCCCcceeEEEEechhcccccccccC Confidence 11 11222222211 223344455556678999887743 23456788999998887654321 Q ss_pred -----CcceEEEEeeccCCCCceeEEEeeeeeEEeecCC------CCcccccchHHH-HHHHHHHHHHHHHHHHHHHHHc Q lcl|Aclame:pro 146 -----RTGRYEYYFQAGAGVGTQLVSFADDEVVPIRFFN------PDGLERGLSLME-SLKSTIFSEDSSRNATAAMWKN 213 (518) Q Consensus 146 -----~~~~~~~~~~~~~~~~~~~~~~~~~~vih~~~~~------~~~~~~G~s~~~-~~~~~i~~~~~~~~~~~~~~~n 213 (518) .+....|.+.. ..+...+.++++.||||.+.. +....+|.|++. .++..|.....+.......+.. T Consensus 138 p~s~~fg~P~~y~v~~--~~~~~~~~iH~SRli~~~g~~~p~~~~~~~~~~G~S~l~~~~~~~i~~~~~~~~~~~~l~~k 215 (427) T protein:vir:10 138 ARSPRYGEPEIYKVSP--GDNMQPYLIHHSRVFIADGERVAQQARKQNQGWGASVLNKSLIDAICDYDYCESLATQILRR 215 (427) T ss_pred ccccccCcceEEEEec--CCCCcceEEccccEEEecCCCchhhhcccCCcccchhhhHHHHHHHHHHHHHHHHHHHHHHH Confidence 23444555532 233445789999999996543 344567999985 5778888888887777776666 Q ss_pred cCCcceeeeeCC---cC-CHHHHHHHHHHHHHHhcCccccccceeccCCcccccccCChhhHHHHHHHHHHHHHHHHHhc Q lcl|Aclame:pro 214 AGRPNLVLRHEK---RL-SPEAQQRLREQFDRAHAGSSNTGKTMVVEEGMEPIPLQLTAVEMQFIEARQLNREEVCGVYD 289 (518) Q Consensus 214 g~~p~gil~~~~---~~-~~e~~~~~~~~~~~~~~g~~n~g~~~vl~~g~~~~~~~~~~~d~q~~e~~~~~~~~Ia~~fg 289 (518) .... +++++. .+ +.+.....+..+........+.+.+.+...+-+|+.++.+..+ +.+........||.+.+ T Consensus 216 ~~~~--v~k~~~l~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~l~~~~e~~e~~~~~lsg--l~~~~~~~~~~iaaa~~ 291 (427) T protein:vir:10 216 KQQA--VWKVKGLAEMCDDDDAQYAARLRLAQVDDNSGVGRAIGIDAETEEYDVLNSDISG--VPEFLSSKMDRIVSLSG 291 (427) T ss_pred hccc--cccchhHHHHhcCccchHHHHHHHHHHHHhcCcccceeeecCCCceeEEecccCC--hHHHHHHHHHHHHhhhC Confidence 4433 233332 11 1111222233333322222344566666677888888766655 45677888899999999 Q ss_pred cchHhhccccccc-cccHHHHHHHHHH-------HHHHHHHHHHHHHHHhhhcchhhccceeeechhhhhccCHHHHH-- Q lcl|Aclame:pro 290 IAPPIVHILDRAT-FSNISAQMRAFYR-------DTMAIPIARIQSAMDKYVGQYWVRKNRMKFDIDDVIQPDWEAKS-- 359 (518) Q Consensus 290 Vpp~~lg~~~~~~-~s~~e~~~~~~~~-------~~l~P~~~~ie~~ln~~l~~~~~~~~~~~fd~~~l~~~d~~~~~-- 359 (518) ||...|...+.+. .++.+.....|+. ..+.|.++++-+.|- . ...+. |.+.+|...+.++++ T Consensus 292 IP~t~L~G~sp~Glnstgd~D~~nyyd~i~~~Qe~~l~p~l~~l~~~i~----~--s~~~~--~~f~pL~~~s~kEkaei 363 (427) T protein:vir:10 292 IHEIIIKNKNVGGVSASQNTALETFYKLVDRKREEDYRPLLEFLLPFIV----D--EEEWS--IEFEPLSVPSKKEESEI 363 (427) T ss_pred CCeeeeccCCccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh----c--CCCcE--EEeCCCCCCCHHHHHHH Confidence 9998664333333 3444555555555 345555554433221 1 12344 444566666665554 Q ss_pred -----HHHHHHHhCCCcCHHHHHHHHh----CCCCCCccCceeeecccccccccccccCCCCCCCCCCCCcccCCCCCcc Q lcl|Aclame:pro 360 -----ESTQKMVNSGVATPNEGREIMG----LPRSDDPKADELYANSALQPLGATPDGAVEGEEAPAPKRPASTPVASLD 430 (518) Q Consensus 360 -----~~~~~~~~~g~~T~NE~R~~~g----~~pi~~~~gD~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 430 (518) +.+++++++|+++++|+|+.+- ...+. +.+.......++. . + ..|..+++ T Consensus 364 ~~~~a~a~~~~~~~gvi~~~e~r~~L~~~~~~~~~~---------~~~~~~~e~~~~~------~----e--~~p~~~e~ 422 (427) T protein:vir:10 364 TKNNVESVTKAITEQIIDLEEARDTLRSIAPEFKLK---------DGNNINIREPEET------T----E--PEPGLGEK 422 (427) T ss_pred HHHHHHHHHHHHhcCCCCHHHHHHHHHhhhccccCC---------CCccccccccchh------c----C--CCCCCCCC Confidence 4566789999999999999872 22211 1111111111000 0 0 00011111 Q ss_pred CCccc Q lcl|Aclame:pro 431 QSPPA 435 (518) Q Consensus 431 ~~~~~ 435 (518) +...+ T Consensus 423 ~~d~~ 427 (427) T protein:vir:10 423 LEDEN 427 (427) T ss_pred CCCCC Confidence 00000 No 134 >protein:vir:78161 Length: 355 # NCBI annotation: hypothetical protein # Family: family:all:2372 # MgeID: mge:1847 # MgeName: Min1 # Cross-refs: genbank:acc:YP_001294798;genbank:gi:149882819;genbank:GeneID:5309189 Probab=99.63 E-value=6.3e-16 Score=103.92 Aligned_cols=325 Identities=12% Similarity=0.089 Sum_probs=178.1 Q ss_pred eEEeeeCCCC---ceeeeeeeCCcceE-EEeccCcceEEEEeeccCCCCceeEEEeeeeeEEeecCCCCcccccchHHHH Q lcl|Aclame:pro 117 YLAIQKNKSG---TPEKLMPMHPSRVA-IKRNSRTGRYEYYFQAGAGVGTQLVSFADDEVVPIRFFNPDGLERGLSLMES 192 (518) Q Consensus 117 ~~~i~~~~~G---~~~~l~~l~p~~v~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~ 192 (518) +.|+++...+ .+..|.+.++.++. ...+.+++....... ...+...+.+++..+|++++....+..||.+.+.. T Consensus 1 v~Eivw~~~~g~~~~~~l~~r~~~~~~~f~~~~~~~l~~~~~~--~~~g~~~~~lp~~kfi~~~~~~~~g~p~G~gLlr~ 78 (355) T protein:vir:78 1 MFEQVYRIENGRARLGKLAWRPPRTISRFDVAPDGGLVAIEQW--GVFGKATVRIPVDRLVVFVNEREGANWLGQSLLRQ 78 (355) T ss_pred CeEEEEEeeCCeEEEeeeeecCccceeeeeeccCCceeEEEec--CCCCCCcceeccCCEEEEEeCCCCCCccchhhHHH Confidence 7888887654 35678888887665 344555554433322 12233446788888888887777788899999999 Q ss_pred HHHHHHHHHHHHHHHHHHHHccCCcceeeeeCCc--CC-----------HHHHHHHHHHHHHHhcCccccccceeccCCc Q lcl|Aclame:pro 193 LKSTIFSEDSSRNATAAMWKNAGRPNLVLRHEKR--LS-----------PEAQQRLREQFDRAHAGSSNTGKTMVVEEGM 259 (518) Q Consensus 193 ~~~~i~~~~~~~~~~~~~~~ng~~p~gil~~~~~--~~-----------~e~~~~~~~~~~~~~~g~~n~g~~~vl~~g~ 259 (518) ++..+.......++...|.+.-+.|--+.+.+.. .+ .+..+.+.........| .+ ..+|++.|+ T Consensus 79 ~~w~~~fK~~~~~~w~~f~Er~g~g~p~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~~~~~i~~g-~~--a~~iip~g~ 155 (355) T protein:vir:78 79 AYKNWLLKDRFLRIQALVGERNGLGVPIYQGAPLPEAIARDTARAEQWLNDQKEEGLQLAKEFRAG-EA--AGGYIPHGA 155 (355) T ss_pred HHHHHHHHHhhHHHHHHHHHHcCCCceEEEecCCCCcccchhhhHHHHHHHHHHHHHHHHHHhhCC-cc--eeEeecCCc Confidence 9999999999999999999998666555555532 21 12222233333332223 22 357899999 Q ss_pred ccccccCChhhHHHHHHHHHHHHHHHHHhccchHhhcccc--ccccccHHHHHHHHHHHHHHHHHHHHHHHHHhhhcchh Q lcl|Aclame:pro 260 EPIPLQLTAVEMQFIEARQLNREEVCGVYDIAPPIVHILD--RATFSNISAQMRAFYRDTMAIPIARIQSAMDKYVGQYW 337 (518) Q Consensus 260 ~~~~~~~~~~d~q~~e~~~~~~~~Ia~~fgVpp~~lg~~~--~~~~s~~e~~~~~~~~~~l~P~~~~ie~~ln~~l~~~~ 337 (518) +++-+........+.++.++..++|+.++.-. .+-...+ .++++- .+.........+.-.++.|++.||+.|+... T Consensus 156 ~ie~~ea~g~~~~~~~~i~~~d~~Isk~iLGq-tlTs~~~~~gGS~Al-g~vh~~v~~~~~~aD~~~i~~~ln~~li~~l 233 (355) T protein:vir:78 156 NFTLTGVQGKLPEMDGPIRYHDEQIARAVLAH-FLTLGGDKSTGSYAL-GDTFASFFTGSLNAVMKHIADVTQQHVVEDL 233 (355) T ss_pred eEEEeecCCCcccHHHHHHHHHHHHHHHHhhh-hhccccCCccchhhH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Confidence 88777655555668888888889998886332 2221111 122332 2334466777888899999999998876542 Q ss_pred h-----c-cceeeechhhhhccCHHHHHHHHHHHHhCCCcCHH-----HHHHHHhCCCCCCccCceeeeccccccccccc Q lcl|Aclame:pro 338 V-----R-KNRMKFDIDDVIQPDWEAKSESTQKMVNSGVATPN-----EGREIMGLPRSDDPKADELYANSALQPLGATP 406 (518) Q Consensus 338 ~-----~-~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~T~N-----E~R~~~g~~pi~~~~gD~~~~~~n~~~~~~~~ 406 (518) - . ..+.+|.+.... .+.+..++.+++++..|++.++ .+|+++|+|.-. .+++...+... +.. T Consensus 234 ~~lN~~~~~~~P~~~~~~~~-~~~~~~a~~~~~l~~~G~~~~~~~~~~~~~e~~gip~p~--~~~~~~~~~~~-~~~--- 306 (355) T protein:vir:78 234 VDQNWGPEEPAPRLVPAQLG-KEQPVTAEAIRALVECGAFTADPELEKDLRARYGLPAPA--ERDDGADAAAA-KAA--- 306 (355) T ss_pred HHhcCCCCCCCCEEEecCcC-hhHHHHHHHHHHHHhCCCccccHHHHHHHHHHhCCCCCC--CCCcccCCccc-ccc--- Confidence 1 1 122233333333 4556789999999999987664 479999997533 23332211100 000 Q ss_pred ccCCCCCCCCCCCCcccCCCCCccCCccccccccChhhhcchhHHHHHHHHHHhhccCcchh Q lcl|Aclame:pro 407 DGAVEGEEAPAPKRPASTPVASLDQSPPASVPGLSPTNSDRSTDSGKTEPRRLMQKPPPKES 468 (518) Q Consensus 407 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~ 468 (518) ....... .++.. ...+..+..+..... .+...-..+. .+.+..-.+.++ T Consensus 307 -----~~~~~~~-~~~~~----~~~~~~a~~~~a~~~--~~~~~~~~~~-~~~~~~~~~~~~ 355 (355) T protein:vir:78 307 -----GRRRAKR-LPGQR----QGAALPSRSPRADPP--RRRGPLRRRP-RHPAHRRCAPDG 355 (355) T ss_pred -----ccccccc-cCCcc----ccccccccCCCCCCh--hhhHHHHHHh-hccccCCCCCCC Confidence 0000000 00000 000111110000000 0001100110 011111112222 No 135 >protein:vir:105782 Length: 449 # NCBI annotation: gp5 # Family: family:all:6783 # MgeID: mge:1501 # MgeName: ES18 # Cross-refs: genbank:acc:YP_224143;genbank:gi:62362218;genbank:GeneID:3342535 Probab=99.53 E-value=2.1e-14 Score=95.60 Aligned_cols=388 Identities=14% Similarity=0.090 Sum_probs=179.5 Q ss_pred CCCCCCC------ccccccccchhhhhhhccC--------ccCCcccCccchhhHHHHhhhHHHHHHHHHHHHhhc-cCc Q lcl|Aclame:pro 3 LANGQTL------SAPAMAELSPQMQDSYYYA--------PAVGMQLERQFSLYGGIYKNQPWVRTVIAKRAQALA-RLP 67 (518) Q Consensus 3 f~~~~~~------~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~v~~~v~~ia~~ia-~lp 67 (518) |.++.+. ......-...-+.....+. ...|.+....+.....+|..+..++.+|+.+++.+- +.| T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~rd~l~~~~~glg~~r~~~~~~~g~~~~~~~~~l~~~Yr~~~ia~~iVd~~~d~~~~~~~ 80 (449) T protein:vir:10 1 MTDKLTLAVNHALNDARMARARMGLMVPTMGLDNKRHSAWCEYGFPELVTYENLYSLYRRGGIAHGAVEKLVGKCWQTNP 80 (449) T ss_pred CchhhHHHHhhhcchhHHHHHHHHHHHHHhcCCcccchhhhhcCCcccCCHHHHHHHHhcCchhHHHHHhhhhhhhhcCc Confidence 2222221 1100000000011000000 011222223344455678889999999999998662 222 Q ss_pred eEEEEecCCceeeecchHHHHHhhccCccCCHHHHHHHHHHHHHHcCCeeEEeee-CCC---------CceeeeeeeCCc Q lcl|Aclame:pro 68 VKCMFTSGDTETEEHDTGYAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQK-NKS---------GTPEKLMPMHPS 137 (518) Q Consensus 68 ~~v~~~~~~~~~~~~~~~~~~l~~~PN~~~t~~~f~~~~~~~~ll~G~~~~~i~~-~~~---------G~~~~l~~l~p~ 137 (518) . +.... +.........+...+.+-+...-+..+.+..-+ -.++|-+++++.- +.. +.+..+.|+... T Consensus 81 ~-i~~g~-~~~~~~~~~~~e~~~~~l~~~~~~~~l~ea~~~-~rl~Gga~i~i~v~d~~~l~~Pl~~~~~i~~i~v~~~~ 157 (449) T protein:vir:10 81 E-IIEGD-DADDSEDETSWEKKSKQVFTNRLWRSFAEADRR-RLVGRYAGILLHIRDEKDWNLPATKGRGLQKVSVSWAG 157 (449) T ss_pred c-cccCc-cccchhhhHHHHHHHHHHHHHHHHHHHHHHHHh-hhccCcEEEEEEecCCCCCCcccccCcceeeEEeeccc Confidence 2 22111 111111111111111111111112233333333 3457777666533 221 234556666554 Q ss_pred ceEEEec-------cCcceEEEEeeccC-CCCceeEEEeeeeeEEeecCCCCcccccchHHHHHHHHHHHHHHHH-HHHH Q lcl|Aclame:pro 138 RVAIKRN-------SRTGRYEYYFQAGA-GVGTQLVSFADDEVVPIRFFNPDGLERGLSLMESLKSTIFSEDSSR-NATA 208 (518) Q Consensus 138 ~v~~~~~-------~~~~~~~~~~~~~~-~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~-~~~~ 208 (518) .+++... ..|...+|.+...- ...+..+.+.++-|+||.... .-|.|.++.++..+.....+. .+.. T Consensus 158 ~i~~~~~~~dp~sp~yg~P~~y~v~~~~~g~~~~~~~iH~SRl~~~~~~~----~~g~~~L~~~yn~l~~~~~~~~~~a~ 233 (449) T protein:vir:10 158 SLKVAEWDTGINSKTYGQPKLWKYTERLPNGSSRRVDIHPDRVFILGDYS----EDAIGFLEPAYNAFVSLEKVEGGSGE 233 (449) T ss_pred cCChhhhhcCCCCCCCCCceEEEEeeeccCCCccceeeccceeEeecCCC----CCChhHHHHHHHHhhhHHHhhhhHHH Confidence 4443211 12344555554221 112344568888899885432 237888998887654333322 2223 Q ss_pred HHHHccCC-----------cceeeeeCCcCCHHHHHHHHHHHHHHhcCccccccceeccCCcccccccCChhhHHHHHHH Q lcl|Aclame:pro 209 AMWKNAGR-----------PNLVLRHEKRLSPEAQQRLREQFDRAHAGSSNTGKTMVVEEGMEPIPLQLTAVEMQFIEAR 277 (518) Q Consensus 209 ~~~~ng~~-----------p~gil~~~~~~~~e~~~~~~~~~~~~~~g~~n~g~~~vl~~g~~~~~~~~~~~d~q~~e~~ 277 (518) .+++|-.+ ..++.........+..+++........+|.+ .+.+..+-+|+.++.++.+. .+.. T Consensus 234 ~~l~~~~rq~~~~~~~~~~~~~l~~~~~~~~e~~~~~~~~~~~~~~~~~~----~~~i~~~~d~~~~~~~~sgl--~d~l 307 (449) T protein:vir:10 234 SFLKNAARQLNVNFEKEIDFTNLASLYGVSIDELQDKFNEVAGEINRGND----VLMTTQGATVTPLVTSVADP--TATY 307 (449) T ss_pred HHHHHHHHHHhhhhhhhhhhhhhhHHhhCCchHHHHHHHHHHHHHhccch----heeecCCcceEEEecccCCh--hHHH Confidence 33333211 1111111111222333444444444333321 34556666788887776654 4566 Q ss_pred HHHHHHHHHHhccchHhhccccccccccHHHHHHHHHH------HHHHHHHHHHHHHHHhhhcchhhccceeeechhhhh Q lcl|Aclame:pro 278 QLNREEVCGVYDIAPPIVHILDRATFSNISAQMRAFYR------DTMAIPIARIQSAMDKYVGQYWVRKNRMKFDIDDVI 351 (518) Q Consensus 278 ~~~~~~Ia~~fgVpp~~lg~~~~~~~s~~e~~~~~~~~------~~l~P~~~~ie~~ln~~l~~~~~~~~~~~fd~~~l~ 351 (518) ..+..+||.+-+||...|-..+.+..++.++ ...|+. .-|.|.++.+-+.|-+.-+-.. ...+.|.+.+|. T Consensus 308 ~~~~q~iaaa~~IP~t~L~Gqsp~glnst~D-~~nyyd~i~~~Q~~l~p~le~l~~~l~~s~~g~~--~~d~~i~f~pL~ 384 (449) T protein:vir:10 308 NVNLQTAAAGVDIPTRILIGNQQAERSSTED-QKYFNARCQSRRVDLSFEIEDFCDKLIELKIIDA--VAKKAVIWDDLN 384 (449) T ss_pred HHHHHHHHHHhCCCeeeeeccCccccccchh-HHHHHHHHHHHHHhhhHHHHHHHHHHHHhhcCCC--CCceeEEeCCCC Confidence 7777889999999996654333333333332 223332 2356777666665543322111 123566667888 Q ss_pred ccCHHHHHHHHH-------HHHhCC---CcCHHHHHHHHhCCCCCCccCceeeecccccccccccccCCCCCCCCCCCCc Q lcl|Aclame:pro 352 QPDWEAKSESTQ-------KMVNSG---VATPNEGREIMGLPRSDDPKADELYANSALQPLGATPDGAVEGEEAPAPKRP 421 (518) Q Consensus 352 ~~d~~~~~~~~~-------~~~~~g---~~T~NE~R~~~g~~pi~~~~gD~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~ 421 (518) ..+.++++++.+ +++++| +++.+|+|+.+|++|.+ ++.+ + .+. ... . T Consensus 385 ~~t~kEkAei~k~~A~a~~~~~~ag~~~~~~~~EiR~~~~~~~~~---~~~~--~-----~e~----~de---~------ 441 (449) T protein:vir:10 385 EQTGTEKLTNAKTMGEINQTMLGSGDNPAFSREEIRTAAGYDNDD---EEPL--G-----EED----GDE---E------ 441 (449) T ss_pred CCCHHHHHHHHHHHHHHHHHHHHccccCCcCHHHHHHHhcccCCC---CCCC--C-----CCC----Ccc---c------ Confidence 888888866544 556666 89999999999998864 2211 0 000 000 0 Q ss_pred ccCCCCCccCCccc Q lcl|Aclame:pro 422 ASTPVASLDQSPPA 435 (518) Q Consensus 422 ~~~~~~~~~~~~~~ 435 (518) +.+.+..+ T Consensus 442 ------~~~~d~~a 449 (449) T protein:vir:10 442 ------DKATDSAA 449 (449) T ss_pred ------cccCCcCC Confidence 00000000 No 136 >protein:vir:106491 Length: 646 # NCBI annotation: Pas4 # Family: family:all:2798 # MgeID: mge:1680 # MgeName: phiAsp2 # Cross-refs: genbank:acc:YP_024790;genbank:gi:48697405;genbank:GeneID:2846148 Probab=99.41 E-value=3.3e-12 Score=83.53 Aligned_cols=504 Identities=12% Similarity=0.065 Sum_probs=244.3 Q ss_pred CCCCC-CCCCccccccccchhhhhhhccC----------ccCCcccCccchhhH---HHHhhhHHHHHHHHHHHHhhccC Q lcl|Aclame:pro 1 MLLAN-GQTLSAPAMAELSPQMQDSYYYA----------PAVGMQLERQFSLYG---GIYKNQPWVRTVIAKRAQALARL 66 (518) Q Consensus 1 ~~f~~-~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~---~~~~~~~~v~~~v~~ia~~ia~l 66 (518) |.+-| |.++.+|.....++... .-..+ ...+.+ ...++-. +.|...|-++-.|.-|++.++++ T Consensus 1 ~~~~rPk~~p~~p~~~~~arrr~-LtaAsa~l~~~~~~~~kt~~~--~~~~WQ~eAW~~~d~vpELry~vgW~~~a~SR~ 77 (646) T protein:vir:10 1 MALLKPKSAPPEPFGAEVARRIA-LAGATAQVDLGASSSWKTWKF--GNKDWQTEGWRLYDIIPEHHFLAGRIGDSVAQA 77 (646) T ss_pred CcccCCCCCCCCcccccccchhh-hhhccccccCCCcceeecCCC--cchhhhHHHHHHHhhhhhHhhHhhhhhhhhcee Confidence 54444 44444433222221111 00000 011111 1112211 23444578889999999999999 Q ss_pred ceEEEEecCCcee--eecchHHHHHhhccCc-cCCHHHHHHHHHHHHHHcCCeeEEee---eCCCCceeeeeeeCCcceE Q lcl|Aclame:pro 67 PVKCMFTSGDTET--EEHDTGYAKLLADPCE-YLDPFAFWEWVASTLDIYGETYLAIQ---KNKSGTPEKLMPMHPSRVA 140 (518) Q Consensus 67 p~~v~~~~~~~~~--~~~~~~~~~l~~~PN~-~~t~~~f~~~~~~~~ll~G~~~~~i~---~~~~G~~~~l~~l~p~~v~ 140 (518) .+..-+.++.+.. ...++.+..+-..+-. .....++++.+..++-+-|++|+... ....+.--.++++....|. T Consensus 78 rL~aseiddtG~~tg~v~~~~v~~iv~~~~Gg~~gQ~qlLkr~~~~ltV~GE~wiv~~~~~~~~~~~~~~W~vvt~~Ev~ 157 (646) T protein:vir:10 78 RLYVTEVDDTGEETGEVQDERIKRLAAVPLGTGSQRDDNLRLAGLDLAVGGECWIVGEGAATSPEAAEGSWFVVTGSAIS 157 (646) T ss_pred eeeeeeecCCCCCcCccchHHHHHHhhhhccchhhHHHHHHHHHhheecccceEEeeccccCCCCCCccceeeecHHHhc Confidence 9998877755532 2334444444444443 34457889999999999999998641 1112222345666666663 Q ss_pred EEeccCcceEEEEeeccC-CCCceeEEEeeeeeEEeecCC--CCcccccchHHHHHHHHHHHHHHHHHHHHHHHHccCCc Q lcl|Aclame:pro 141 IKRNSRTGRYEYYFQAGA-GVGTQLVSFADDEVVPIRFFN--PDGLERGLSLMESLKSTIFSEDSSRNATAAMWKNAGRP 217 (518) Q Consensus 141 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~vih~~~~~--~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~p 217 (518) .. +... .+..-+ ..++..+.++..++ .||..+ |..-.+--||+.++...+.......+...+..+.-.+- T Consensus 158 ~t----g~~~--~i~~p~~~~g~~~v~~~~~d~-lvRiW~P~Prr~~epDSpvra~l~~l~Ei~~lt~~I~aaakSRL~G 230 (646) T protein:vir:10 158 RT----GDEI--AVRRPQQRGGSKLVLVDGQDI-LIRCWRPHPNDTDQADSFTRSAIVPLREIELLTKREFAELDSRLTG 230 (646) T ss_pred cC----CCee--eeecCccCCCCCcceecCCce-EEEEecCCcccccCCcchhHHHHHHHHHHHHhhhHhHHHHHHHHhc Confidence 21 1211 111111 12444555555555 346544 34445678999999999999999999999999988899 Q ss_pred ceeeeeCCcCC-------HHHHHHHHHHHH----HHhcC--ccccccceeccC-Cc------ccccccCCh-hhHHHHHH Q lcl|Aclame:pro 218 NLVLRHEKRLS-------PEAQQRLREQFD----RAHAG--SSNTGKTMVVEE-GM------EPIPLQLTA-VEMQFIEA 276 (518) Q Consensus 218 ~gil~~~~~~~-------~e~~~~~~~~~~----~~~~g--~~n~g~~~vl~~-g~------~~~~~~~~~-~d~q~~e~ 276 (518) .|||.+|..++ +-....|.+.|. ..+.. +..+--++|+.. |. +++.+.+.. -+.--+.+ T Consensus 231 nGvLfvP~e~s~p~~~~~~a~~~~l~~~l~qaa~tAi~De~S~aA~vPiia~~P~E~i~~~~~ik~l~f~~eite~aikt 310 (646) T protein:vir:10 231 AGIMFLPEGVDFPRGEEDPAGLAGFMAYLQRAAAASMADQSRASAMVPIMATIPNEMMEHLDKIKPLTFWSELSAEITPM 310 (646) T ss_pred CceeeeccccccCCCCCCCcchhHHHHHHHHHHHhhhcCCCCccceeeeEEeeChHHHhhhhcceeeccCchhhHHHhhh Confidence 99998886543 112233333332 23322 222333344332 21 233333332 23335778 Q ss_pred HHHHHHHHHHHhccchHh-hccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHhhhcch----hh----ccceeeech Q lcl|Aclame:pro 277 RQLNREEVCGVYDIAPPI-VHILDRATFSNISAQMRAFYRDTMAIPIARIQSAMDKYVGQY----WV----RKNRMKFDI 347 (518) Q Consensus 277 ~~~~~~~Ia~~fgVpp~~-lg~~~~~~~s~~e~~~~~~~~~~l~P~~~~ie~~ln~~l~~~----~~----~~~~~~fd~ 347 (518) |+-.+..||..+.|||+. +|+. ++|.=+.-+....-++ -|.|++..|+++|++.++.. .+ ..|-++||. T Consensus 311 R~daI~RlA~glDIppE~LLGlg-d~NHWtAWqI~de~vr-HI~P~l~~ic~AlT~~~Lrp~Le~eGi~dp~kyvvW~Da 388 (646) T protein:vir:10 311 KDKAIARLASSAEIPGEVLTGIG-DANHWTAWLISDEGIR-WIRGYLGLIADALTRGFLRRALESMGVTNPERYAFAFDT 388 (646) T ss_pred HHHHHHHHHhccCCchhheeecc-ccceeeeeeeccccch-hhhhHHHHHHHHHHhhHHHHHHHHcCCCChhHeEEeecC Confidence 999999999999999966 4544 4443333344444455 59999999999999876532 11 346789999 Q ss_pred hhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHHhCCCCCCccCceeee---------cccc--cccccccccCCCCCCCC Q lcl|Aclame:pro 348 DDVIQPDWEAKSESTQKMVNSGVATPNEGREIMGLPRSDDPKADELYA---------NSAL--QPLGATPDGAVEGEEAP 416 (518) Q Consensus 348 ~~l~~~d~~~~~~~~~~~~~~g~~T~NE~R~~~g~~pi~~~~gD~~~~---------~~n~--~~~~~~~~~~~~~~~~~ 416 (518) +.|. .|+. +.+....+.+.|.||-...|+.+|+.--+.|.-++..+ +.++ .|.-+...+...-+... T Consensus 389 S~Lt-~~pd-~~deA~qa~drGAIt~eAlrk~~Gf~~dd~pt~~E~~~~~~~~~v~~~P~Lil~P~~qa~~~~P~~~~~~ 466 (646) T protein:vir:10 389 STLA-SKPN-RLDEAIQLHERNLIKDEEVVKAGAFSVDQMPTVQERAVQILLGLVKTQPDLILDPAIQAALGLPAVQSVG 466 (646) T ss_pred cccc-cCCC-CcHHHHHHHHcCCccHHHHHHHhcccccccCChHHHHHHHHHHHhcCCccccccchhhccccCCCcCccc Confidence 8873 3333 33344557889999999999999997554432221111 1111 12221111111101101 Q ss_pred CCCCcccCCCC-----CccCCccccccccChh-----hhcchhHHHHHHHHHH-hhccCcchhH-HHHHHHHHHHhhh-h Q lcl|Aclame:pro 417 APKRPASTPVA-----SLDQSPPASVPGLSPT-----NSDRSTDSGKTEPRRL-MQKPPPKESS-PKHLRAVKGAMGR-G 483 (518) Q Consensus 417 ~~~~~~~~~~~-----~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~-~~k~~~~~~~-~~~~~~~~~~~~~-~ 483 (518) -+..+...+.+ +....+...++.++++ .-..+.+.+.+.+.+. .+.+...+.. ..-.-.+..+|+. + T Consensus 467 lpp~~~~~~dg~~~~~e~~g~~~~~E~~~~pda~~~~a~~~~~~~r~~~~~~~~~~~~~p~a~~~aav~l~v~RAL~lAG 546 (646) T protein:vir:10 467 LPPTAAQRTDGDLDDDESEGAPNGGEAPDQPDADEARAITAALDRRIALAARPVLALPSPEAVFNASAKLMILRALELAG 546 (646) T ss_pred cCCcccccccCCCCChhhcCCCCCCccCCCCCCCccccccccccccchhhhhhhhccccchhHHHHHHHHHHHHHHHhcc Confidence 00001111111 0001111111111111 1012233333333332 2222222222 2222233444433 1 Q ss_pred hhhcccccchh---hhhhhHHH-------------HHHHHHH---HHhhhcc-cC Q lcl|Aclame:pro 484 KDIKGFALQLA---EKYPDDLE-------------DILLAVQ---LALAERK-DN 518 (518) Q Consensus 484 ~~~~~~~~~~~---~~~~~~~~-------------~~~~~~~---~~~~~~~-~~ 518 (518) +-+.-.+.+.+ +..+++++ -+..+|- -+|+.+- |+ T Consensus 547 ~Rlrt~~~~~a~~r~vp~he~h~~l~Pv~~~~~~rl~~G~wd~~~~v~~~lg~D~ 601 (646) T protein:vir:10 547 GRLTTPAERRGRWSDVPRHELHHHVGPITPDKARRVTEGAWNHVAVAAADLGVDA 601 (646) T ss_pred ccccCchhhhHHhhcCChhhceeecCCCChhhHHHHHhcccccHHHHHHhcCCCh Confidence 11111111111 11111110 0111111 0111111 11 No 137 >protein:vir:106716 Length: 698 # NCBI annotation: gp18 # Family: family:all:297 # MgeID: mge:1599 # MgeName: Bcep1 # Cross-refs: genbank:acc:NP_944326;genbank:gi:38638625;genbank:GeneID:2657345 Probab=99.36 E-value=2.4e-13 Score=89.73 Aligned_cols=485 Identities=13% Similarity=0.085 Sum_probs=207.8 Q ss_pred CCCCCCCCCccccccccch--------------hhhhhhccCccCCcccC----c---cchhhHHHHhhhHHHHHHHHHH Q lcl|Aclame:pro 1 MLLANGQTLSAPAMAELSP--------------QMQDSYYYAPAVGMQLE----R---QFSLYGGIYKNQPWVRTVIAKR 59 (518) Q Consensus 1 ~~f~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~----~---~~~~~~~~~~~~~~v~~~v~~i 59 (518) .+=....+.+.|+.+.... ...-.+.+.......+. . .+.. .....+.|-+++|+.+| T Consensus 54 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~F~Gy~~-la~laQ~~eyr~~~~~i 132 (698) T protein:vir:10 54 ALDAAPVAEPSPSLRLARQFEVDVSNYTPRERRAASYALDFNGTSMDALSFVTSSGFPGFPT-LVLLAQLPEYRAMHEVL 132 (698) T ss_pred ccccccccCCCccccccccceeccccCCccccchhhhhhcccccccccchhhhccCcchHHH-HHHHhhccchhhHHHHH Confidence 1111111111111111100 00000110000000000 0 1111 23445788899999999 Q ss_pred HHhhccCceEEEEec-------------CCceeeecchHHHHHhhccCccCCHHHHHHHHHHHHHHcCCeeEEeeeCC-- Q lcl|Aclame:pro 60 AQALARLPVKCMFTS-------------GDTETEEHDTGYAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQKNK-- 124 (518) Q Consensus 60 a~~ia~lp~~v~~~~-------------~~~~~~~~~~~~~~l~~~PN~~~t~~~f~~~~~~~~ll~G~~~~~i~~~~-- 124 (518) ++.+..- |.-.... ++.....+-..+.+|...-....-+..|.+.+.+.. +||-+.+++.-.. T Consensus 133 a~e~~R~-w~~~~~~~~e~~~~~g~~~~~~~~~~~d~dqi~~L~~e~erl~V~~~l~eai~~aR-lfGGa~~~i~I~gdd 210 (698) T protein:vir:10 133 ADECIRT-WGEAIGGTKEKADTSGLAAGGNAASTSDGDQLKQINDEIERLRIRDAVRTTVIHDQ-AFGRAHPYFKIKGDD 210 (698) T ss_pred HHHhhcc-cceeccccchhhhhhcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHhcc-cccceEEEEEeecCc Confidence 9988665 5332111 011111111333444444333344444555544444 5666654443221 Q ss_pred ---------------CCceeeeeeeCCcceEEEecc--------CcceEEEEeeccCCCCceeEEEeeeeeEEeecCC-C Q lcl|Aclame:pro 125 ---------------SGTPEKLMPMHPSRVAIKRNS--------RTGRYEYYFQAGAGVGTQLVSFADDEVVPIRFFN-P 180 (518) Q Consensus 125 ---------------~G~~~~l~~l~p~~v~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~vih~~~~~-~ 180 (518) .|...+|.+++|..|++.... .+...+|++. +. ++..+-++.|.... | T Consensus 211 ~~l~~PL~~~~~~I~kGslKGL~ViDp~~vtP~~~n~~dP~spdfgkP~~y~V~-----G~---~IH~SRL~~~vg~pvp 282 (698) T protein:vir:10 211 QIMDTPLVPRPYTVPKGSFQGLRVVEPYWVTPNNYNSINPVADDFYKPSTWWMI-----GS---EVHATRLHTIVSRPVG 282 (698) T ss_pred cccccccccccccccCccceeeeeecccccccchhhhccchhhccCCCceEEEe-----cc---eecceeEEEecCCCch Confidence 344566888888888875421 1222333332 11 35555555444332 2 Q ss_pred -----CcccccchHHHHHHHHHHHHHHHHHHHHHHHHccCCcceeeeeCCcCCHHHH--HHHHHHHHHHhcCccccccce Q lcl|Aclame:pro 181 -----DGLERGLSLMESLKSTIFSEDSSRNATAAMWKNAGRPNLVLRHEKRLSPEAQ--QRLREQFDRAHAGSSNTGKTM 253 (518) Q Consensus 181 -----~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~p~gil~~~~~~~~e~~--~~~~~~~~~~~~g~~n~g~~~ 253 (518) ...+.|+|..+.++..|.....+..........-.........-..++.... -..+-.+-+++++ |. ++. T Consensus 283 d~LKp~y~f~G~Sv~q~~~e~V~~~~rT~~~v~~Li~~~~~~~l~~dla~aL~~g~~~~l~~R~eli~~~Rs--n~-G~~ 359 (698) T protein:vir:10 283 DMLKPTYSFAGISMTQLAMPYIDNWLRTRQSVSDIVKQFSVSGILMDLAQALTPGANVDLSMRAELINRYRD--NR-NIL 359 (698) T ss_pred hhhcchhccCCccHHHHHHHHHHHHHHHhhhHHHHHHHhhHHHHHHHHHHhcCChhhHHHHHHHHHHHHhcC--cc-ceE Confidence 1224699999999999998887777766665442222111111111222221 1223344455543 33 456 Q ss_pred ecc-CCcccccccCChhhHHHHHHHHHHHHHHHHHhccchHhh-ccccccccccHHHHHH-------HHHHHHHHHHHHH Q lcl|Aclame:pro 254 VVE-EGMEPIPLQLTAVEMQFIEARQLNREEVCGVYDIAPPIV-HILDRATFSNISAQMR-------AFYRDTMAIPIAR 324 (518) Q Consensus 254 vl~-~g~~~~~~~~~~~d~q~~e~~~~~~~~Ia~~fgVpp~~l-g~~~~~~~s~~e~~~~-------~~~~~~l~P~~~~ 324 (518) +++ .+.+|...+.+....+ +....+.+.||.+-+||...| |.+-++-+++.|.-.+ +..++-|+|.+++ T Consensus 360 llDk~~Eefeq~st~lSGLd--dVi~qf~q~VAgaa~IPltkLfGqSPkGlNATGE~D~rnYYD~I~s~Qe~~L~p~L~r 437 (698) T protein:vir:10 360 FLDKATEEFFQFNTPLSGLD--ALQAQAQEQMSAVSHIPLIKLLGITPTGLNASSEGEIRVWYDYVRAYQRNALQQLMND 437 (698) T ss_pred EEecCCcceEEEecCcCCHH--HHHHHHHHHHHhhhcCchhhhhccCCcccCccchhhHHHHHHHHHHHHHHHHHHHHHH Confidence 666 5788888876665543 556666788999999998654 4433333344454444 4445578899988 Q ss_pred HHHHHHhhhcchhhccceeeechhhhhccCHHHHHHHH-------HHHHhCCCcCHHHHHHHHhCCCCCCc-----cCce Q lcl|Aclame:pro 325 IQSAMDKYVGQYWVRKNRMKFDIDDVIQPDWEAKSEST-------QKMVNSGVATPNEGREIMGLPRSDDP-----KADE 392 (518) Q Consensus 325 ie~~ln~~l~~~~~~~~~~~fd~~~l~~~d~~~~~~~~-------~~~~~~g~~T~NE~R~~~g~~pi~~~-----~gD~ 392 (518) +-+.|-+..+...... +.|.+..|.+.+.++++++. ..++..|+++++|+|.++.-+|-..- .-|+ T Consensus 438 l~~ii~rS~~G~idp~--i~~~fnPL~qmtd~EkAeI~~k~A~~d~~~~~~gvI~~~evr~rL~~d~~s~Y~~~~d~~d~ 515 (698) T protein:vir:10 438 VIVMIQLSLFGAVDPS--IKWQWNALRELDDLEVAEARYKQAQSDVLYVQEQVIRPDQVAARLNTEPDGPYAGKLDANDD 515 (698) T ss_pred HHHHHHHHhcCCCCCc--ceEEeCCCCCcCHHHHHHHHhhhhHHHHHHHHhcCCCHHHHHHHHhccCCCccccccCCccc Confidence 8878766665544333 44555677777777766663 45778999999999999865432110 1123 Q ss_pred eeecc-cccccc-----cccccCCCCCCC-CCCCCcccCCCCC-ccCCccccccccChhhh-----cchhHHHHHHHHHH Q lcl|Aclame:pro 393 LYANS-ALQPLG-----ATPDGAVEGEEA-PAPKRPASTPVAS-LDQSPPASVPGLSPTNS-----DRSTDSGKTEPRRL 459 (518) Q Consensus 393 ~~~~~-n~~~~~-----~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~ 459 (518) +..|. +.+... ....+...+.++ +....++++.... .+...++......+... .-....+. .-.+ T Consensus 516 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~giv~~~g~--~vLL 593 (698) T protein:vir:10 516 PGAPADDDIDGVLTYVQRMAEGGDTGAPTAPGGARAGATAPPAAANVNANANPREAGAQDAAMRAAGIVFRAGD--KVLL 593 (698) T ss_pred CCCCCCCcchHHHhhhcCCcCCCCcccccccccccCCCCCCcccccccCCCCccccCcccceeeEEEEEEEcCC--eEEE Confidence 32222 111111 111111111110 0111111111111 11111111111111100 00000000 0001 Q ss_pred hhccCcchhHHHHHHHHHHHhhhhhhhcccccchhhh-hhhHHHHHHHHHHHHhhhcccC Q lcl|Aclame:pro 460 MQKPPPKESSPKHLRAVKGAMGRGKDIKGFALQLAEK-YPDDLEDILLAVQLALAERKDN 518 (518) Q Consensus 460 ~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 518 (518) .+++.+. | .+=.++--.++ .+.++ .||-+|..-.+....+...... T Consensus 594 ~~r~~g~---W--------~lPgG~ie~GE--t~~~aa~RE~~EEtG~~~~~~l~~~g~~ 640 (698) T protein:vir:10 594 MKRPAGD---W--------GLPAGKVEDGE--TPEEAARRETLEETGHAGDYVLAPLGKY 640 (698) T ss_pred EEecCCC---c--------ccCccccCCCC--CHHHHHHHHHHhhcccccchhhhccccc Confidence 1122110 1 00000000000 00011 1222222211111112211111 No 138 >protein:vir:78589 Length: 695 # NCBI annotation: NUDIX hydrolase # Family: family:all:297 # MgeID: mge:1854 # MgeName: BcepNY3 # Cross-refs: genbank:acc:YP_001294854;genbank:gi:149882917;genbank:GeneID:5291060 Probab=99.31 E-value=8.3e-13 Score=86.83 Aligned_cols=488 Identities=13% Similarity=0.075 Sum_probs=206.8 Q ss_pred CCCCCCCCCccccccccch--------------hhhhhhc--cCccCCccc--Cc---cchhhHHHHhhhHHHHHHHHHH Q lcl|Aclame:pro 1 MLLANGQTLSAPAMAELSP--------------QMQDSYY--YAPAVGMQL--ER---QFSLYGGIYKNQPWVRTVIAKR 59 (518) Q Consensus 1 ~~f~~~~~~~~~~~~~~~~--------------~~~~~~~--~~~~~~~~~--~~---~~~~~~~~~~~~~~v~~~v~~i 59 (518) .+=....+.+.|+.+.... ...-.+. +......++ .. .+.. .....+.|-+++|+.+| T Consensus 54 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~F~Gy~~-la~laQ~~eyr~~~~~i 132 (695) T protein:vir:78 54 ALDAAPVAEPSPSLRLARQFEVDVSNYTPRERRAASYALDFNGTSMDALSFVTSSGFPGFPT-LVLLAQLPEYRAMHEVL 132 (695) T ss_pred ccccccccCCCcccccceeceeccccCCccccchhhhhhcccccccccchhhhccCcchHHH-HHHHhhccchhhHHHHH Confidence 1111111111111111100 0000011 100000000 00 1111 23445788899999999 Q ss_pred HHhhccCceEEEEec-------------CCceeeecchHHHHHhhccCccCCHHHHHHHHHHHHHHcCCeeEEeeeCC-- Q lcl|Aclame:pro 60 AQALARLPVKCMFTS-------------GDTETEEHDTGYAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQKNK-- 124 (518) Q Consensus 60 a~~ia~lp~~v~~~~-------------~~~~~~~~~~~~~~l~~~PN~~~t~~~f~~~~~~~~ll~G~~~~~i~~~~-- 124 (518) ++.+..- |.-.... ++.....+-..+.+|...-....-+..|.+.+-+. -+||-+.+++.-.. T Consensus 133 a~e~~R~-w~~~~~~~~e~~~~~g~~~~~~~~~~~d~dqi~~L~~e~erL~V~~~l~eaik~a-RlfGGa~~~i~i~gdd 210 (695) T protein:vir:78 133 ADECIRT-WGEAIGGTKEKADTSGLAAGGNAASTSDGDQLKQINDEIERLRIRDAVRTTVIHD-QAFGRAHPYFKIKGDD 210 (695) T ss_pred HHHhhcc-cceeccccchhhhhhcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHhh-ccccceEEEEEeccCc Confidence 9988665 5332111 01111111133344444433444444455544444 45666655443322 Q ss_pred ---------------CCceeeeeeeCCcceEEEecc--------CcceEEEEeeccCCCCceeEEEeeeeeEEeecCC-C Q lcl|Aclame:pro 125 ---------------SGTPEKLMPMHPSRVAIKRNS--------RTGRYEYYFQAGAGVGTQLVSFADDEVVPIRFFN-P 180 (518) Q Consensus 125 ---------------~G~~~~l~~l~p~~v~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~vih~~~~~-~ 180 (518) .|...+|.+++|..|++.... .+...+|++. + .++..+-++.|.... | T Consensus 211 ~~l~~PL~~~~~~I~kGslKGl~ViDp~~vtP~~~n~~dP~spdfgkP~~y~V~------G--~kIH~SRL~~f~g~plP 282 (695) T protein:vir:78 211 QIMDTPLVPRPYTVPKGSFQGLRVVEPYWVTPNNYNSINPVADDFYKPSTWWMI------G--TEVHATRLHTIVSRPVG 282 (695) T ss_pred cccccccccccccccCcceeeeEeecccccccchhhhccchhhccCCCceEEEe------c--eEEeeeeEEEecCCCch Confidence 344566888888888875421 1222333331 1 235666555554332 1 Q ss_pred -----CcccccchHHHHHHHHHHHHHHHHHHHHHHHHccCCcceeeeeC--CcCCHHHH--HHHHHHHHHHhcCcccccc Q lcl|Aclame:pro 181 -----DGLERGLSLMESLKSTIFSEDSSRNATAAMWKNAGRPNLVLRHE--KRLSPEAQ--QRLREQFDRAHAGSSNTGK 251 (518) Q Consensus 181 -----~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~p~gil~~~--~~~~~e~~--~~~~~~~~~~~~g~~n~g~ 251 (518) ...+.|+|..+.+...|................-. ..++ +.+ ..+..... -..+-++-+++++ | .+ T Consensus 283 d~LKp~y~~~GiSv~q~~~e~V~~~~rT~~~v~~Li~~~~-v~~l-k~dla~~L~~g~~~~l~~R~eli~~~Rs--n-~G 357 (695) T protein:vir:78 283 DMLKPTYSFAGISMTQLAMPYIDNWLRTRQSVSDIVKQFS-VSGI-LMDLAQALMPGANVDLSMRAELINRYRD--N-RN 357 (695) T ss_pred hhhhcccccCcccHHHHHHHHHHHHHHHHhHHHHHHHhhh-hHHH-HHHHHHhhcChhHHHHHHHHHHHHHhcC--c-cc Confidence 12356999999999999988877777766654422 2222 111 11111111 1223344455543 3 34 Q ss_pred ceecc-CCcccccccCChhhHHHHHHHHHHHHHHHHHhccchHhh-ccccccccccHHHHHH-------HHHHHHHHHHH Q lcl|Aclame:pro 252 TMVVE-EGMEPIPLQLTAVEMQFIEARQLNREEVCGVYDIAPPIV-HILDRATFSNISAQMR-------AFYRDTMAIPI 322 (518) Q Consensus 252 ~~vl~-~g~~~~~~~~~~~d~q~~e~~~~~~~~Ia~~fgVpp~~l-g~~~~~~~s~~e~~~~-------~~~~~~l~P~~ 322 (518) +.+++ ...+|...+.+....+ +....+.+.||.+-+||...| |.+-++-+++.|.-.+ +..++-|+|.+ T Consensus 358 ~~llDk~~Eefeq~stslSGLd--dVi~qf~q~VAgaa~IPltkLfGqSPkGlNATGE~D~rnYYD~I~s~Qe~~L~p~L 435 (695) T protein:vir:78 358 ILFLDKATEEFFQFNTPLSGLD--ALQAQAQEQMSAVSHIPLIKLLGITPTGLNASSEGEIRVWYDYVRAYQRNALQQLM 435 (695) T ss_pred eEEEecCCcceEEEecccCCHH--HHHHHHHHHHHhhhcCchhhhhccCCccccccchhhHHHHHHHHHHHHHHHHHHHH Confidence 56667 4678888876665543 555566788999999998654 4433333344444444 44456788999 Q ss_pred HHHHHHHHhhhcchhhccceeeechhhhhccCHHHHHHH-------HHHHHhCCCcCHHHHHHHHhCCCCCC-----ccC Q lcl|Aclame:pro 323 ARIQSAMDKYVGQYWVRKNRMKFDIDDVIQPDWEAKSES-------TQKMVNSGVATPNEGREIMGLPRSDD-----PKA 390 (518) Q Consensus 323 ~~ie~~ln~~l~~~~~~~~~~~fd~~~l~~~d~~~~~~~-------~~~~~~~g~~T~NE~R~~~g~~pi~~-----~~g 390 (518) +++-+.|-+..+...... +.|.+..|.+.+.++++++ ...++..|+++++|+|.++.-+|-.. +-. T Consensus 436 ~rl~~ii~rS~~G~idpd--i~~~fnPL~qmtd~EkAeI~~k~A~~d~~~~~~gvI~~~evr~rL~~d~~s~Y~~~~D~~ 513 (695) T protein:vir:78 436 NDVIVMIQLSLFGAVDPS--IKWQWNALRELDDLEVAESRYKQAQSDVLYVQEQVIRPDQVAARLNTEPDGPYAGKLDAN 513 (695) T ss_pred HHHHHHHHHHhcCCCCCc--ceEEeCCCCCcCHHHHHHHHhhhhHHHHHHHHhcCCCHHHHHHHHhcCCCcccccccccc Confidence 888878766665544344 4455557777777666665 44578899999999999987654211 012 Q ss_pred ceeeecccc-cccc-cccccCCCCCCCCCCCC--cccCCCCC-ccCCccc----cccccChh-hhcchhH-HHHHHHHHH Q lcl|Aclame:pro 391 DELYANSAL-QPLG-ATPDGAVEGEEAPAPKR--PASTPVAS-LDQSPPA----SVPGLSPT-NSDRSTD-SGKTEPRRL 459 (518) Q Consensus 391 D~~~~~~n~-~~~~-~~~~~~~~~~~~~~~~~--~~~~~~~~-~~~~~~~----~~~~~~~~-~~~~~~~-~~~~~~~~~ 459 (518) |++.+|... ++.. ...++...+++..++++ ++.+..+. .....+. ........ ....... .++ -.+ T Consensus 514 d~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ag~~~~~~~aag~v~~~~g~---vLl 590 (695) T protein:vir:78 514 DDPGVPADDDIDGVLTYVQRLAEGGDTGAPGGARAGATAPPTVANVNANVKPREAGAQDAAMRAAGAVYVVDGK---VLL 590 (695) T ss_pred cCCCcCccchhhhhHhhhcCcccccccCCCCCCCCCCCCCCceeeeeccccccccCCCCcccceeEEEEEeCCE---EEE Confidence 333333221 0000 00011111111111111 11111111 1111111 11111110 0000000 000 001 Q ss_pred hhccCcc------------hhHHHHHHHHHHHhhhhhhhcccccchhhhhhhHHHHHHHHHHHHhhh--cccC Q lcl|Aclame:pro 460 MQKPPPK------------ESSPKHLRAVKGAMGRGKDIKGFALQLAEKYPDDLEDILLAVQLALAE--RKDN 518 (518) Q Consensus 460 ~~k~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 518 (518) .+++.+. .....-.|++..=.|- +..+ .+.+.-. ++.+-.++..-+.+ +.-| T Consensus 591 ~kr~~g~W~lPgG~vE~gEt~~~aa~RE~~EEtGl--~~~~-el~~~g~----~~~~~~~f~~~~e~~~~~l~ 656 (695) T protein:vir:78 591 MKRPAGDWGLPAGKVEGNETPEEAARRETREETGY--DHDG-ELVPLGK----FDGFFHAFVAHLEPFDVELN 656 (695) T ss_pred EEecCCCccCCccccCCCCCHHHHHHHHHHHHhCC--cccc-ceeeeee----ecceEEEEEEeecccCcccC Confidence 1122111 0011111111111110 0000 0000000 00000000000000 0000 No 139 >protein:vir:101541 Length: 694 # NCBI annotation: gp17 # Family: family:all:297 # MgeID: mge:1477 # MgeName: Bcep43 # Cross-refs: genbank:acc:NP_958122;genbank:gi:41057668;genbank:GeneID:2716798 Probab=99.27 E-value=3.2e-12 Score=83.59 Aligned_cols=488 Identities=13% Similarity=0.070 Sum_probs=205.2 Q ss_pred CCCCCCCCCccccc---cccchh--------------hhhhhccCccCCcccC----c---cchhhHHHHhhhHHHHHHH Q lcl|Aclame:pro 1 MLLANGQTLSAPAM---AELSPQ--------------MQDSYYYAPAVGMQLE----R---QFSLYGGIYKNQPWVRTVI 56 (518) Q Consensus 1 ~~f~~~~~~~~~~~---~~~~~~--------------~~~~~~~~~~~~~~~~----~---~~~~~~~~~~~~~~v~~~v 56 (518) -|=.++.++++.+. +..... ..-.+.+.......+. . .+.. .....+.|-+++|+ T Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~F~Gy~~-la~laQ~~eyr~~~ 128 (694) T protein:vir:10 50 ALNALDAAPVAEPSPSLRLARQFEVDVSNYTPRERRAASYALDFNGTSMDALSFVTSSGFPGFPT-LVLLAQLPEYRAMH 128 (694) T ss_pred cchhhcccccCCCCcchhhhhhccccccCCCccccchhhhhhccCcccccchhhhhccCcchHHH-HHHHhhccchhhHH Confidence 11111111111111 000000 0000010000000000 0 1111 23345788899999 Q ss_pred HHHHHhhccCceEEEEec-------------CCceeeecchHHHHHhhccCccCCHHHHHHHHHHHHHHcCCeeEEeeeC Q lcl|Aclame:pro 57 AKRAQALARLPVKCMFTS-------------GDTETEEHDTGYAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQKN 123 (518) Q Consensus 57 ~~ia~~ia~lp~~v~~~~-------------~~~~~~~~~~~~~~l~~~PN~~~t~~~f~~~~~~~~ll~G~~~~~i~~~ 123 (518) .+|++.+..- |.-.... ++.....+-..+.+|...-....-+..|.+.+-+. -+||-+.+++.-. T Consensus 129 ~~ia~e~~R~-w~~~~~~~~e~~~~~g~~~~~~~~~~~d~dqi~~L~~e~erl~V~~~l~eaik~a-RlfGGa~~~i~I~ 206 (694) T protein:vir:10 129 EVLADECIRT-WGEAIGGTKEKADTSGLAAGGNAASTSDGDQLKQINDEIERLRIRDAVRTTVIHD-QAFGRAHPYFKIK 206 (694) T ss_pred HHHHHHhhcc-cceeccccchhhhhhcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHhh-ccccceEEEEEee Confidence 9999988665 5332111 01111111133344444433444444455544444 4566665554322 Q ss_pred C-----------------CCceeeeeeeCCcceEEEecc--------CcceEEEEeeccCCCCceeEEEeeeeeEEeecC Q lcl|Aclame:pro 124 K-----------------SGTPEKLMPMHPSRVAIKRNS--------RTGRYEYYFQAGAGVGTQLVSFADDEVVPIRFF 178 (518) Q Consensus 124 ~-----------------~G~~~~l~~l~p~~v~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~vih~~~~ 178 (518) . .|...+|.+++|..|++.... .+...+|++. + .++..+-++.|... T Consensus 207 gdd~~l~~PL~~~~~~I~kGslKGl~ViDp~~vtP~~~n~~dP~spdfgkP~~y~V~------G--~~IH~SRL~~f~g~ 278 (694) T protein:vir:10 207 GDDQIMDTPLVPRPYTVPKGSFQGLRVVEPYWVTPNNYNSINPVADDFYKPSTWWMI------G--TEVHATRLHTIVSR 278 (694) T ss_pred cCccccccccccccccccCcceeeeEeecccccccchhhhccchhhccCCCceEEEe------c--eEEeeeeEEEecCC Confidence 2 344566888898888875421 1222333331 1 23566665555433 Q ss_pred CC------CcccccchHHHHHHHHHHHHHHHHHHHHHHHHccCCcceeeeeC--CcCCHHHH--HHHHHHHHHHhcCccc Q lcl|Aclame:pro 179 NP------DGLERGLSLMESLKSTIFSEDSSRNATAAMWKNAGRPNLVLRHE--KRLSPEAQ--QRLREQFDRAHAGSSN 248 (518) Q Consensus 179 ~~------~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~p~gil~~~--~~~~~e~~--~~~~~~~~~~~~g~~n 248 (518) .. ...+.|+|..+.+...|................-. ..++ +.+ ..+..... -..+-.+-+++++ | T Consensus 279 plPd~LKp~y~~~G~Sv~q~~~e~V~~~~rT~~~v~~Li~~~~-v~~l-k~dla~~L~~g~~~~l~~R~eli~~~Rs--n 354 (694) T protein:vir:10 279 PVGDMLKPTYSFAGISMTQLAMPYIDNWLRTRQSVSDIVKQFS-VSGI-LMDLAQALMPGANVDLSMRAELINRYRD--N 354 (694) T ss_pred CchhhhhcccccCcccHHHHHHHHHHHHHHHHhHHHHHHHhhh-hHHH-HHHHHHhhcChhHHHHHHHHHHHHHhcC--c Confidence 21 12356999999999999988877777766654422 2222 111 11111111 1223344455543 3 Q ss_pred cccceecc-CCcccccccCChhhHHHHHHHHHHHHHHHHHhccchHhh-ccccccccccHHHHHH-------HHHHHHHH Q lcl|Aclame:pro 249 TGKTMVVE-EGMEPIPLQLTAVEMQFIEARQLNREEVCGVYDIAPPIV-HILDRATFSNISAQMR-------AFYRDTMA 319 (518) Q Consensus 249 ~g~~~vl~-~g~~~~~~~~~~~d~q~~e~~~~~~~~Ia~~fgVpp~~l-g~~~~~~~s~~e~~~~-------~~~~~~l~ 319 (518) .++.+++ ...+|...+.+....+ +....+.+.||.+-+||...| |.+-++-+++.|.-.+ +..++-|+ T Consensus 355 -~G~~llDk~~Eefeq~stslSGLd--dVi~qf~q~VAgaa~IPltkLfGqSPkGlNATGE~D~rnYYD~I~s~Qe~~L~ 431 (694) T protein:vir:10 355 -RNILFLDKATEEFFQFNTPLSGLD--ALQAQAQEQMSAVSHIPLIKLLGITPTGLNASSEGEIRVWYDYVRAYQRNALQ 431 (694) T ss_pred -cceEEEecCCcceEEEecccCCHH--HHHHHHHHHHHhhhcCchhhhhccCcccccccchhhHHHHHHHHHHHHHHHHH Confidence 3456667 4678888876655543 555566788999999998654 4433333344444444 44456788 Q ss_pred HHHHHHHHHHHhhhcchhhccceeeechhhhhccCHHHHHHH-------HHHHHhCCCcCHHHHHHHHhCCCCCC----- Q lcl|Aclame:pro 320 IPIARIQSAMDKYVGQYWVRKNRMKFDIDDVIQPDWEAKSES-------TQKMVNSGVATPNEGREIMGLPRSDD----- 387 (518) Q Consensus 320 P~~~~ie~~ln~~l~~~~~~~~~~~fd~~~l~~~d~~~~~~~-------~~~~~~~g~~T~NE~R~~~g~~pi~~----- 387 (518) |.++++-+.|-+..+...... +.|.+..|.+.+.++++++ ...++..|+++++|+|.++.-+|-.. T Consensus 432 p~L~rl~~ii~rS~~G~idp~--i~~~fnPL~qmtd~EkAeI~~k~A~~d~~~~~~gvI~~~evr~rL~~d~~s~Y~~~~ 509 (694) T protein:vir:10 432 QLMNDVIVMIQLSLFGAVDPS--IKWQWNALRELDDLEVAESRYKQAQSDVLYVQEQVIRPDQVAARLNTEPDGPYAGKL 509 (694) T ss_pred HHHHHHHHHHHHHhcCCCCCc--ceEEeCCCCCcCHHHHHHHHhhhhHHHHHHHHhcCCCHHHHHHHHhcCCCccccccc Confidence 999888878766665544344 4455557777776666665 44578899999999999987654211 Q ss_pred ccCceeeecccc-cccc-cccccCCCCCCCCCCCC--cccCCCCC---ccCCccc--cccccChh-hhcchhH-HHHHHH Q lcl|Aclame:pro 388 PKADELYANSAL-QPLG-ATPDGAVEGEEAPAPKR--PASTPVAS---LDQSPPA--SVPGLSPT-NSDRSTD-SGKTEP 456 (518) Q Consensus 388 ~~gD~~~~~~n~-~~~~-~~~~~~~~~~~~~~~~~--~~~~~~~~---~~~~~~~--~~~~~~~~-~~~~~~~-~~~~~~ 456 (518) +-.|++.+|... ++.. ...++...+++...+++ ++.+..++ ..-.-++ ........ ....... .++ T Consensus 510 D~~d~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~~~~~~~~~~~ag~~~~~~~~ag~v~~~~g~--- 586 (694) T protein:vir:10 510 DANDDPGVPADDDIDGVLTYVQRLAEGGDTGAPGGARAGATAPPTVANVNANVNPREAGAQDAAMRAAGAVYVVDGK--- 586 (694) T ss_pred ccccCCCcCccchhhhhHhhhcCcccccccCCCCcccccccCCCcccccccccCccccCCCCccceeeEEEEEeCCE--- Confidence 012333332221 0000 00011111111111111 11111111 0000000 00001110 0000000 000 Q ss_pred HHHhhccCcc------------hhHHHHHHHHHHHhhhhhhhcccccchhhhhhhHHHHHHHHHHHHhh--hcccC Q lcl|Aclame:pro 457 RRLMQKPPPK------------ESSPKHLRAVKGAMGRGKDIKGFALQLAEKYPDDLEDILLAVQLALA--ERKDN 518 (518) Q Consensus 457 ~~~~~k~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~ 518 (518) -.+.+++.+. .....-.|++..=.|- ++.+ .+.+.-. ++.+-.++..-+. ++.-| T Consensus 587 vLl~kr~~g~W~lPgG~vE~gEt~~~a~~RE~~EEtGl--~~~~-el~~~~~----~~~~~h~f~~~~e~~~v~l~ 655 (694) T protein:vir:10 587 VLLMKRPAGDWGLPAGKVEGNETPEEAARRETREETGY--DHDG-ELVPLGK----FDGFFHAFVAHLEPFDVELN 655 (694) T ss_pred EEEEEecCCCccCCccccCCCCCHHHHHHHHHHHHhCC--cccc-ceeeeee----ecceEEEEEEeecccCcccC Confidence 0011122111 0011111111111110 0000 0000000 0000000000000 00000 No 140 >protein:vir:3648 Length: 695 # NCBI annotation: gp17 # Family: family:all:297 # MgeID: mge:75 # MgeName: Bcep781 # Cross-refs: genbank:acc:NP_705643;genbank:gi:23752328;genbank:GeneID:955749 Probab=99.27 E-value=1.8e-12 Score=84.92 Aligned_cols=487 Identities=13% Similarity=0.076 Sum_probs=204.6 Q ss_pred CCCCCCCCCccccccccchhhhhhhccCccCCccc--Cc---cchhhHHHHhhhHHHHHHHHHHHHhhccCceEEEEec- Q lcl|Aclame:pro 1 MLLANGQTLSAPAMAELSPQMQDSYYYAPAVGMQL--ER---QFSLYGGIYKNQPWVRTVIAKRAQALARLPVKCMFTS- 74 (518) Q Consensus 1 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~---~~~~~~~~~~~~~~v~~~v~~ia~~ia~lp~~v~~~~- 74 (518) -.|--..+.-.|...-......+ |.+......++ .. .+.. .....+.|-+++|+.+|++.+..- |.-.... T Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~~~~~F~Gy~~-la~laQ~~eyr~~~~~ia~e~~R~-w~~~~~~~ 147 (695) T protein:vir:36 71 RQFEVDVSNYTPRERRAASYALD-FNGTSMDALSFVTSSGFPGFPT-LVLLAQLPEYRAMHEVLADECIRT-WGEAIGGT 147 (695) T ss_pred eeceecccccCccccchhhhhhc-ccccccccchhhhccCcchHHH-HHHHhhccchhhHHHHHHHHhhcc-cceecccc Confidence 22221111111111000000000 00110000000 00 1111 234457888999999999988665 5332111 Q ss_pred ------------CCceeeecchHHHHHhhccCccCCHHHHHHHHHHHHHHcCCeeEEeeeCC-----------------C Q lcl|Aclame:pro 75 ------------GDTETEEHDTGYAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQKNK-----------------S 125 (518) Q Consensus 75 ------------~~~~~~~~~~~~~~l~~~PN~~~t~~~f~~~~~~~~ll~G~~~~~i~~~~-----------------~ 125 (518) ++.....+...+.+|...-....-+..|.+.+- +--+||-+.+++.-.. . T Consensus 148 ~e~~~~~g~~~~~~~~~~~d~dqik~L~~e~erL~V~~~l~eaik-~aRlfGGa~~~i~i~gdd~~l~~PL~~~~~~I~k 226 (695) T protein:vir:36 148 KEKADTSGLAAGGNAASTSDGDQLKQINDEIERLRIRDAVRTTVI-HDQAFGRAHPYFKIKGDDQIMDTPLVPRPYTVPK 226 (695) T ss_pred hhhhhhccccccccccccCchHHHHHHHHHHHHHHHHHHHHHHHH-hhccccceEEEEEeccCccccccccccccccccC Confidence 111111111233334333333333344444444 4445666655543322 3 Q ss_pred CceeeeeeeCCcceEEEecc--------CcceEEEEeeccCCCCceeEEEeeeeeEEeecCC-C-----CcccccchHHH Q lcl|Aclame:pro 126 GTPEKLMPMHPSRVAIKRNS--------RTGRYEYYFQAGAGVGTQLVSFADDEVVPIRFFN-P-----DGLERGLSLME 191 (518) Q Consensus 126 G~~~~l~~l~p~~v~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~vih~~~~~-~-----~~~~~G~s~~~ 191 (518) |...+|.+++|..|++.... .+...+|++. + .++..+-++.|.... | ...+.|+|..+ T Consensus 227 GslKGl~ViDp~~vtP~~~n~~dP~spdfgkP~~y~V~------G--~kIH~SRL~~f~g~plPd~LKp~y~~~GiSv~q 298 (695) T protein:vir:36 227 GSFQGLRVVEPYWVTPNNYNSINPVADDFYKPSTWWMI------G--TEVHATRLHTIVSRPVGDMLKPTYSFAGISMTQ 298 (695) T ss_pred cceeeeEeecccccccchhhhccchhhccCCCceEEEe------c--eEEeeeeEEEecCCCchhhhhcccccCcccHHH Confidence 44566888888888875421 1222333331 1 235666555554332 1 12356999999 Q ss_pred HHHHHHHHHHHHHHHHHHHHHccCCcceeeeeC--CcCCHHHH--HHHHHHHHHHhcCccccccceecc-CCcccccccC Q lcl|Aclame:pro 192 SLKSTIFSEDSSRNATAAMWKNAGRPNLVLRHE--KRLSPEAQ--QRLREQFDRAHAGSSNTGKTMVVE-EGMEPIPLQL 266 (518) Q Consensus 192 ~~~~~i~~~~~~~~~~~~~~~ng~~p~gil~~~--~~~~~e~~--~~~~~~~~~~~~g~~n~g~~~vl~-~g~~~~~~~~ 266 (518) .+...|................-. ..++ +.+ ..+....- -..+-++-+++++ | .++.+++ ...+|...+. T Consensus 299 ~~~e~V~~~~rT~~~v~~Li~~~~-v~~l-k~dla~aL~~g~~~~l~~R~eli~~~Rs--n-~G~~llDk~~Eefeq~st 373 (695) T protein:vir:36 299 LAMPYIDNWLRTRQSVSDIVKQFS-VSGI-LMDLAQALMPGANVDLSMRAELINRYRD--N-RNILFLDKATEEFFQFNT 373 (695) T ss_pred HHHHHHHHHHHHHhHHHHHHHhhh-HHHH-HHHHHHhhcChhHHHHHHHHHHHHHhcC--c-cceEEEecCCcceEEEec Confidence 999999888877777666654422 2221 111 11111111 1223344455543 3 3456667 4678888876 Q ss_pred ChhhHHHHHHHHHHHHHHHHHhccchHhh-ccccccccccHHHHH-------HHHHHHHHHHHHHHHHHHHHhhhcchhh Q lcl|Aclame:pro 267 TAVEMQFIEARQLNREEVCGVYDIAPPIV-HILDRATFSNISAQM-------RAFYRDTMAIPIARIQSAMDKYVGQYWV 338 (518) Q Consensus 267 ~~~d~q~~e~~~~~~~~Ia~~fgVpp~~l-g~~~~~~~s~~e~~~-------~~~~~~~l~P~~~~ie~~ln~~l~~~~~ 338 (518) +....+ +....+.+.||.+-+||...| |.+-++-+++.|.-. .+..++-|+|.++++-+.|-+..+.... T Consensus 374 slSGLd--dVi~qf~q~VAgaa~IPltkLfGqSPkGlNATGE~D~rnYYD~I~s~Qe~~L~p~L~rl~~ii~rS~~G~id 451 (695) T protein:vir:36 374 PLSGLD--ALQAQAQEQMSAVSHIPLIKLLGITPTGLNASSEGEIRVWYDYVRAYQRNALQQLMNDVIVMIQLSLFGAVD 451 (695) T ss_pred ccCCHH--HHHHHHHHHHHhhhcCchhhhhccCcccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC Confidence 665543 555566788999999998654 443333334444444 4444567889998888787666655443 Q ss_pred ccceeeechhhhhccCHHHHHHH-------HHHHHhCCCcCHHHHHHHHhCCCCCC-----ccCceeeecccc-cccc-c Q lcl|Aclame:pro 339 RKNRMKFDIDDVIQPDWEAKSES-------TQKMVNSGVATPNEGREIMGLPRSDD-----PKADELYANSAL-QPLG-A 404 (518) Q Consensus 339 ~~~~~~fd~~~l~~~d~~~~~~~-------~~~~~~~g~~T~NE~R~~~g~~pi~~-----~~gD~~~~~~n~-~~~~-~ 404 (518) .. +.|.+..|.+.+.++++++ ...++..|+++++|+|.++.-+|-.. +-.|++.+|... ++.. . T Consensus 452 pd--i~~~fnPL~qmtd~EkAeI~~k~A~~d~~~~~~gvI~~~evr~rL~~d~~s~Y~~~~D~~d~p~~~~~~~~~~~~~ 529 (695) T protein:vir:36 452 PS--IKWQWNALRELDDLEVAESRYKQAQSDVLYVQEQVIRPDQVAARLNTEPDGPYAGKLDANDDPGVPADDDIDGVLT 529 (695) T ss_pred Cc--ceEEeCCCCCcCHHHHHHHHhhhhHHHHHHHHhcCCCHHHHHHHHhcCCCcccccccccccCCCcCccchhhhhHh Confidence 44 4455557777777666665 44578899999999999987654211 012333332221 0000 0 Q ss_pred ccccCCCCCCCCCCCC--cccCCCCC---ccCCccc--cccccChh-hhcchhH-HHHHHHHHHhhccCcc--------- Q lcl|Aclame:pro 405 TPDGAVEGEEAPAPKR--PASTPVAS---LDQSPPA--SVPGLSPT-NSDRSTD-SGKTEPRRLMQKPPPK--------- 466 (518) Q Consensus 405 ~~~~~~~~~~~~~~~~--~~~~~~~~---~~~~~~~--~~~~~~~~-~~~~~~~-~~~~~~~~~~~k~~~~--------- 466 (518) ..++...+++..++++ .+.+..+. ..-.-++ ........ ...-... .++ -.+.+++.+. T Consensus 530 ~~~~~~~~~~~~~~~~~~~g~~~~~~v~~~~~~~~~~~ag~~~~~~~aag~v~~~~g~---vLl~kr~~g~W~lPgG~vE 606 (695) T protein:vir:36 530 YVQRLAEGGDTGAPGGARAGATAPPTVANVNANVNPREAGAQDAAMRAAGAVYVVDGK---VLLMKRPAGDWGLPAGKVE 606 (695) T ss_pred hhcCcccccccCCCCcccccccCCCcccccccccCccccCCCCccceeeEEEEEeCCE---EEEEEecCCCccCCccccC Confidence 0011111111111111 11111111 0000000 00001110 0000000 000 0011122111 Q ss_pred ---hhHHHHHHHHHHHhhhhhhhcccccchhhhhhhHHHHHHHHHHHHhhh--cccC Q lcl|Aclame:pro 467 ---ESSPKHLRAVKGAMGRGKDIKGFALQLAEKYPDDLEDILLAVQLALAE--RKDN 518 (518) Q Consensus 467 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 518 (518) .....-.|++..=.|- ++.+ .+.+.-. ++.+-.++..-+.+ +.-| T Consensus 607 ~gEt~~~aa~RE~~EEtGl--~~~~-el~~~g~----~~~~~~~f~~~~e~~~~~l~ 656 (695) T protein:vir:36 607 GNETPEEAARRETREETGY--DHDG-ELVPLGK----FDGFFHAFVAHLEPFDVELN 656 (695) T ss_pred CCCCHHHHHHHHHHHHhCC--cccc-ceeeeee----ecceEEEEEEeecccCcccC Confidence 0111111111111110 0000 0000000 00000000000000 0000 No 141 >protein:vir:102426 Length: 631 # NCBI annotation: gp11 # Family: family:all:2798 # MgeID: mge:1618 # MgeName: Pipefish # Cross-refs: genbank:acc:YP_655288;genbank:gi:109521851;genbank:GeneID:4157741 Probab=99.26 E-value=7.4e-12 Score=81.59 Aligned_cols=496 Identities=14% Similarity=0.106 Sum_probs=235.9 Q ss_pred CCCCC-CCCCcccccccc--chhhh---hhhccCccCCcccCccchhhH---HHHhhhHHHHHHHHHHHHhhccCceEEE Q lcl|Aclame:pro 1 MLLAN-GQTLSAPAMAEL--SPQMQ---DSYYYAPAVGMQLERQFSLYG---GIYKNQPWVRTVIAKRAQALARLPVKCM 71 (518) Q Consensus 1 ~~f~~-~~~~~~~~~~~~--~~~~~---~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~v~~~v~~ia~~ia~lp~~v~ 71 (518) .+-.| |-+.+++.++.. +..+. ..|.+. .| +.+...+-. +.|...+-++-.|.-|++.++++.+..- T Consensus 8 r~~rrpkg~~~a~~r~L~aAs~~~~dpg~~~~~~--~g--~~~~~~WQ~eAW~~~d~v~Elry~vgW~~~s~sr~rL~as 83 (631) T protein:vir:10 8 RLVRRPKGGRPAPSRALTAASQPLPDPSQVFSKS--TG--ISRNSDWQTDAWEAVDLVGELRYYVGWRASSCSRCRLVAS 83 (631) T ss_pred eeeecCCCCCccchhhhhhhhccccchhhhhhhh--cC--CcccchhhHHHHHHHHhhhhHHHHhhhhhhhhceeeeEee Confidence 11111 112222221111 11111 111111 11 111111111 2344557888899999999999999988 Q ss_pred EecCC-----ceeeecc---hHHHHH-hhccCccCCHHHHHHHHHHHHHHcCCeeEEeeeC-CCCc----------eeee Q lcl|Aclame:pro 72 FTSGD-----TETEEHD---TGYAKL-LADPCEYLDPFAFWEWVASTLDIYGETYLAIQKN-KSGT----------PEKL 131 (518) Q Consensus 72 ~~~~~-----~~~~~~~---~~~~~l-~~~PN~~~t~~~f~~~~~~~~ll~G~~~~~i~~~-~~G~----------~~~l 131 (518) +.+.+ +..+.++ ..+..+ ..=+...+...++++.++.++-+-|++|+.+... .+|. .-++ T Consensus 84 ~idpDtg~ptg~iee~~~~~~~v~~~~~~i~gG~lgQ~~llkrl~~~ltV~GE~wiv~l~~p~~~~~~~pd~~~r~~~~W 163 (631) T protein:vir:10 84 ELDENTGLPTGGISEDNTEGERVREIVSKIADGTLGQAALTKRVVECLTVPGELWIVILTRPVKGAPAQPDGSVRTRQEW 163 (631) T ss_pred eeccCCCCCccccccCCchhHHHHHHHHhcCCCcchHHHHHHHHHhheecccceEEEEEeccCcCCCCCcccccccccce Confidence 87755 2223222 222223 2356678899999999999999999999887442 2221 2356 Q ss_pred eeeCCcceEEEeccCcceEEEEeeccCCCCceeEEEe-eeeeEEee--cCCCCcccccchHHHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 132 MPMHPSRVAIKRNSRTGRYEYYFQAGAGVGTQLVSFA-DDEVVPIR--FFNPDGLERGLSLMESLKSTIFSEDSSRNATA 208 (518) Q Consensus 132 ~~l~p~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~vih~~--~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~ 208 (518) +++....|+.....++.. +.... +....|- ..+ +-|| .++|..-.+--||+.++...+.......+... T Consensus 164 ~~vt~~ei~~~~~g~g~~--v~lp~-----g~~h~~~~~~D-~l~RiW~P~prr~~e~dSpvra~l~~l~Ei~~~t~~i~ 235 (631) T protein:vir:10 164 YAVSKEEIKKSNKGSGTN--IVLPT-----GEEHEFVKGTD-IIFRVWIPKPRKASEPDSPVRAVLDSIREIVRTTKTIA 235 (631) T ss_pred eeccHHHHhcccCcccce--eecCC-----CCccceecCCc-eEEEeeCCCcccccCCcchhHHHHHHHHHHHHhhhHHH Confidence 666666665443333222 22221 1122222 223 3344 34444445788999999999999999999888 Q ss_pred HHHHccCCcceeeeeCCcCCH---------------------HHHHHHHHHHH----HHhc--CccccccceeccC-C-- Q lcl|Aclame:pro 209 AMWKNAGRPNLVLRHEKRLSP---------------------EAQQRLREQFD----RAHA--GSSNTGKTMVVEE-G-- 258 (518) Q Consensus 209 ~~~~ng~~p~gil~~~~~~~~---------------------e~~~~~~~~~~----~~~~--g~~n~g~~~vl~~-g-- 258 (518) +..+.-.+-.|+|.+|..++= .....+.+.+- ..+. ++..+--++|+.. | T Consensus 236 aaakSRl~gnGvlflP~els~P~~~~~~~~~~g~~v~~~~g~pa~~~l~~~l~q~a~tai~De~S~aA~vPii~~~p~E~ 315 (631) T protein:vir:10 236 NASKSRLIGNGVLFVPHEMSLPAAQGPVSEVEGEEIAPLVGEPAVQQLTDMLFQVAETAVEDEDSQAAFIPVIAGVPGEQ 315 (631) T ss_pred HHHHHHHhhCceeEeccccccCCCCCCCCCcCCccCCccccchhHHHHHHHHHHHHhhhhcCCCCccceeeeeEeechHH Confidence 888888888899888765431 14445544444 2221 1122323333321 1 Q ss_pred -cccccccCC-hhhHHHHHHHHHHHHHHHHHhccchHh-hccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc Q lcl|Aclame:pro 259 -MEPIPLQLT-AVEMQFIEARQLNREEVCGVYDIAPPI-VHILDRATFSNISAQMRAFYRDTMAIPIARIQSAMDKYVGQ 335 (518) Q Consensus 259 -~~~~~~~~~-~~d~q~~e~~~~~~~~Ia~~fgVpp~~-lg~~~~~~~s~~e~~~~~~~~~~l~P~~~~ie~~ln~~l~~ 335 (518) .+++-+.+. .-+.--+.+|+-.+..||..+.|||+. +|++.++|.=+.=+....-++-.|.|++..|+++|++.++. T Consensus 316 i~~i~hlkf~~ei~e~aiktR~daI~RlA~glDi~pE~LLGlGsd~NHWsAWqI~dedVrlHI~P~l~lic~AlT~q~Lr 395 (631) T protein:vir:10 316 IKDVKHIRFDNEITEVAIKTRNDAIARLAMGLDVSPERLLGLGSQTNHWSAWQISDEDVQLHIAPVMEIFCQALTDQILR 395 (631) T ss_pred hcCeeEEeecCchhHHHHhhHHHHHHHHHhccCCchhhheeccCCccceEEEEecccceeeecchHHHHHHHHHHhhHHH Confidence 122223332 223345778999999999999999965 56544555444444555566677999999999999987664 Q ss_pred hh-------hccceeeechhhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHHhCCCCCCcc----------------Cce Q lcl|Aclame:pro 336 YW-------VRKNRMKFDIDDVIQPDWEAKSESTQKMVNSGVATPNEGREIMGLPRSDDPK----------------ADE 392 (518) Q Consensus 336 ~~-------~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~T~NE~R~~~g~~pi~~~~----------------gD~ 392 (518) .. -..|-++||.+.|. .|+. +.+....+.+.|+||-...|+.+|+.--+.+. +|. T Consensus 396 p~Le~eGvDp~kYvvW~DaS~Lt-~dPd-r~deA~qa~drGAIt~eAlrk~lGf~eDd~yd~~t~e~~~~~a~~av~~dp 473 (631) T protein:vir:10 396 VTLAREGIDPSKYVVWYDPSQLT-IDPD-KSDEAKFAYENGAINGEALRKYLGLGDDAGYDFTTREGWVMWAQDAVSKDP 473 (631) T ss_pred HHHHHhCCCHHHhEeeecCcccc-cCCC-CcHHHHHHHHcCCcCHHHHHHHhcCchhcccCcCchHHHHHHHHHHhhccc Confidence 21 13477899998873 3433 23344457889999999999999996432111 111 Q ss_pred eeecccccccccccccCCCCCCCCCCCCcccCCCCCccCCccccccccChhhhcc-------hhHHHHHHHHHHhhccCc Q lcl|Aclame:pro 393 LYANSALQPLGATPDGAVEGEEAPAPKRPASTPVASLDQSPPASVPGLSPTNSDR-------STDSGKTEPRRLMQKPPP 465 (518) Q Consensus 393 ~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~k~~~ 465 (518) .++ .++.|+-...-... ..|+++.+......+.+++.+.+..+.+++..+. .......+.. .-+ . T Consensus 474 aLi-p~lApl~~~~~~~v---~~P~~~a~~~~g~ed~~~~~~~~~g~~epdt~d~~p~~~~a~~~~~iv~ll--v~R--A 545 (631) T protein:vir:10 474 TLI-PMLAPLIAGVLKQI---EFPQQQAIDSGGNEDTSDADDLDDGEQEPDTEDDDDGTQKAGLETGIVDLM--VDR--A 545 (631) T ss_pred Ccc-hhhHHHHHHHhhhc---cCCCCCCCCCCCCCccccccccccCCCCCCCCCCCCccccccchHHHHHHH--HHH--H Confidence 111 12233211100000 1111111111111111111122222222221111 0111111000 000 0 Q ss_pred chhHHHHHHHH-HHHhhhhhhhccccc--chhhhhhhHHHHHHHHHHHHhhh----c--ccC Q lcl|Aclame:pro 466 KESSPKHLRAV-KGAMGRGKDIKGFAL--QLAEKYPDDLEDILLAVQLALAE----R--KDN 518 (518) Q Consensus 466 ~~~~~~~~~~~-~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~----~--~~~ 518 (518) -+.+.|..+.- ..+.++..++..-.. ..+...++++-.+.--|.-+|++ + .|+ T Consensus 546 LelAGkRl~~r~r~~~ar~~~v~~he~H~~~~Pv~~~ev~rli~gwd~~ld~~~~~~Lg~d~ 607 (631) T protein:vir:10 546 LELVGKRRRGRDRETLARLSGVRERDYHRYMDPVPESEVDRLMSGWDSALDDKILLRLGLDP 607 (631) T ss_pred HHhhcchhcCCcccchhHHhcccccccccccCCCCHHHHHHHHHHHHHHHHHHHHHHhCCCH Confidence 00011110000 000000000000000 00001122222111112222211 1 122 No 142 >protein:vir:106027 Length: 629 # NCBI annotation: gp9 # Family: family:all:2798 # MgeID: mge:1505 # MgeName: Cooper # Cross-refs: genbank:acc:YP_654906;genbank:gi:109392362;genbank:GeneID:4157055 Probab=99.25 E-value=3.8e-12 Score=83.18 Aligned_cols=503 Identities=15% Similarity=0.104 Sum_probs=230.4 Q ss_pred CCCCCCCCCccccccccchhh--hhhhcc--CccCCcccCccchhhH---HHHhhhHHHHHHHHHHHHhhccCceEEEEe Q lcl|Aclame:pro 1 MLLANGQTLSAPAMAELSPQM--QDSYYY--APAVGMQLERQFSLYG---GIYKNQPWVRTVIAKRAQALARLPVKCMFT 73 (518) Q Consensus 1 ~~f~~~~~~~~~~~~~~~~~~--~~~~~~--~~~~~~~~~~~~~~~~---~~~~~~~~v~~~v~~ia~~ia~lp~~v~~~ 73 (518) .+--|.+..++ ++.+.+.- .+.-.. ....|..+ ..++-. +.|.-.+-++-.|.-|++.++++.+..-+. T Consensus 7 rv~rrpk~~p~--~r~l~aasqp~~P~~~~~~~~~g~~~--~~~WQ~eAW~~~d~VgElryyvgW~~ss~Sr~rL~as~i 82 (629) T protein:vir:10 7 RVSRRPKGSPA--RRSLTAASQPMEPGRTPSRQVAGTVV--RTSWQNEAWECMDLVGELRYYVGWRASSCSRVELIASEL 82 (629) T ss_pred eEEecCCCccc--eeeeccccCCCCcchhhchhhhhhhh--hhhhhHHHHHHHHhhhhHHHHhhhhhhhheeeeEEEeee Confidence 11222222211 11111100 000000 00011110 111111 223344778888899999999999988776 Q ss_pred cCCce-----eeecchHHHHHh----hccCccCCHHHHHHHHHHHHHHcCCeeEEeeeCCCCce----e-eeeeeCCcce Q lcl|Aclame:pro 74 SGDTE-----TEEHDTGYAKLL----ADPCEYLDPFAFWEWVASTLDIYGETYLAIQKNKSGTP----E-KLMPMHPSRV 139 (518) Q Consensus 74 ~~~~~-----~~~~~~~~~~l~----~~PN~~~t~~~f~~~~~~~~ll~G~~~~~i~~~~~G~~----~-~l~~l~p~~v 139 (518) +.++. .+.+++.-..+. .=-...+...++++.+..++-+-|+.|+.++....+.+ . .++.+...-| T Consensus 83 dpDtg~ptg~i~ed~p~~~~v~~~v~~iagG~lGqaqLlkr~~~~ltV~GE~~i~il~~~~~~pd~~~r~~W~vVt~~Ei 162 (629) T protein:vir:10 83 DPDTGKPTGGIRDDDPDGLRFLEIVKTMAGGPLGQAQLQKRAAECLTVPGEHRICLLDQGDKNPDGSVRHNWYVVTNDEV 162 (629) T ss_pred cCCCCCCccccccCchhHHHHHHHHHHhcCccchHHHHHHHHHhheeccCceEEEEeecCCCCCCcccccceeeecHHHh Confidence 64432 222333322222 22344577789999999999999999999876655533 2 3344444443 Q ss_pred EEEeccCcceEEEEeeccCCCCceeEEEeeeeeEEeecCC--CCcccccchHHHHHHHHHHHHHHHHHHHHHHHHccCCc Q lcl|Aclame:pro 140 AIKRNSRTGRYEYYFQAGAGVGTQLVSFADDEVVPIRFFN--PDGLERGLSLMESLKSTIFSEDSSRNATAAMWKNAGRP 217 (518) Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vih~~~~~--~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~p 217 (518) .. ...+...... ..+....|..+.-+-||..+ |..-..--||+.++...+.......+...+..+.-.+- T Consensus 163 ~~---kg~g~~~i~l-----pdg~~he~~~~~D~l~RvW~P~Prr~~e~DSpvra~l~~lrEi~r~tk~i~~aakSRL~g 234 (629) T protein:vir:10 163 KN---KGAGKTDIEL-----PDGTIHEYSKGRDVMFRVWNPRPRRAKEPDSPVRACLDSLREIIRTTKKIRNASKSRLIG 234 (629) T ss_pred cc---ccCceeEEEc-----CCCceeeeeCCCeeEEEeeCCCcccccCCcchhHHHHHHHHHHHHhhhHhHHHHHhHHhh Confidence 31 1112222221 12333445443333445443 44445678999999999999998888888888888888 Q ss_pred ceeeeeCCcCC------------H----------HHHHHHHHHHHH----HhcC--ccccccceecc-CC---ccccccc Q lcl|Aclame:pro 218 NLVLRHEKRLS------------P----------EAQQRLREQFDR----AHAG--SSNTGKTMVVE-EG---MEPIPLQ 265 (518) Q Consensus 218 ~gil~~~~~~~------------~----------e~~~~~~~~~~~----~~~g--~~n~g~~~vl~-~g---~~~~~~~ 265 (518) .||+.+|..++ + -..+.|.+.|.+ .+.. +..+--++++. .| .+++.+. T Consensus 235 nGvlflP~e~slp~~~ap~~~~~Pg~~~p~~~g~aa~d~l~~~l~q~a~aAi~De~S~aA~vPiia~vP~E~l~~ikhLk 314 (629) T protein:vir:10 235 NGVVFLPQELSLPRATAPVADNQPGAPVPIVDGVAAADELSNLLFQTAAAAVDDEDSQAALIPLLATVPGEHLQKIFHLK 314 (629) T ss_pred CceeEeccCcccccccCCCCCCCCcccccccCCCcchHHHHHHHHHHHHhhhcCCCCccceeeeEEeechHHhcCeeeee Confidence 88876654321 0 123334333333 2221 11222233332 12 2344444 Q ss_pred CChh-hHHHHHHHHHHHHHHHHHhccchHh-hccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHhhhcchh------ Q lcl|Aclame:pro 266 LTAV-EMQFIEARQLNREEVCGVYDIAPPI-VHILDRATFSNISAQMRAFYRDTMAIPIARIQSAMDKYVGQYW------ 337 (518) Q Consensus 266 ~~~~-d~q~~e~~~~~~~~Ia~~fgVpp~~-lg~~~~~~~s~~e~~~~~~~~~~l~P~~~~ie~~ln~~l~~~~------ 337 (518) +... +.--+.+|+-.+..+|..+.|||+. +|++.++|.=+.-+....-++..|.|.+..|+++|++.++... T Consensus 315 f~~eite~~iktR~daI~RlAmglDispErLLGlGsd~NHWsAWqI~dedvrlHI~P~l~~ic~Ait~~~Lrp~L~~eGi 394 (629) T protein:vir:10 315 IGNEITEVEIKTRNDAIARLAMGLDVSPERLLGLGSNSNHWSAWQIGDEDVQLHIKPVMEVLCAAIYREVLVATLRAEGI 394 (629) T ss_pred ecCchhHHHHhhHHHHHHHHHhccCCChhheeeccCCccceeeEEecccceeeecchHHHHHHHHHHhHHHHHHHHHhCC Confidence 4332 3334678999999999999999965 5655555544444455556667799999999999998765321 Q ss_pred -hccceeeechhhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHHhCCCCCCccCcee-----------eeccccc----c Q lcl|Aclame:pro 338 -VRKNRMKFDIDDVIQPDWEAKSESTQKMVNSGVATPNEGREIMGLPRSDDPKADEL-----------YANSALQ----P 401 (518) Q Consensus 338 -~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~T~NE~R~~~g~~pi~~~~gD~~-----------~~~~n~~----~ 401 (518) -..|-++||.+.| ..|+.. .+....+...|.||-...|+.+|+.--+.+.-+++ ..+..++ | T Consensus 395 Dp~~Yvvw~DaS~L-t~dPd~-~deA~~a~drGaIt~eAlRr~lG~~~dd~y~~~t~~~~q~~A~~~v~~~P~Li~~~ap 472 (629) T protein:vir:10 395 DPDRYVLWYDASGL-TVDPDK-TDEATAAKEQGAITHEAYRRYLGLADEDGYDLETLEGAQAWARDAIVADPSLIKVLAP 472 (629) T ss_pred CHHHhEeeecCccc-ccCCCC-cHHHHHHHHcCCccHHHHHHHhccccccCCCcCCcHHHHHHHHHHhcCCCchhhhhhh Confidence 1347788998886 334433 33344578899999999999999965432211111 1111111 1 Q ss_pred cccccccCCCCCCCCCCCCcccCCCCCccCCccccccccChhhhcchhHHH---HHHHHHHhhccCcchhHHHHH--HHH Q lcl|Aclame:pro 402 LGATPDGAVEGEEAPAPKRPASTPVASLDQSPPASVPGLSPTNSDRSTDSG---KTEPRRLMQKPPPKESSPKHL--RAV 476 (518) Q Consensus 402 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~k~~~~~~~~~~~--~~~ 476 (518) +....-+...--.++....++..+..+++++++...+..+.+......... ...+++++.- ..-+.+.|.. ..- T Consensus 473 ll~~~l~~i~~P~p~~a~~~~~~~~~~~E~~~~~~e~~~e~dA~~a~~~~~~aa~~~A~rllv~-RALelAGkRl~~~rd 551 (629) T protein:vir:10 473 LLTDELAEIDWPEPPAALPPGEDDQADEEQDTTGSEPSTEDDAEAAARISSVADMVLAERLLTV-RALGLAGKRRVNTND 551 (629) T ss_pred hcCCccccccccCCCCcCCCCCcccCccccCCCCCCcCCCcchhhcccCCchhhHHHHHHHHHH-HHHHHccccccCCCc Confidence 111100000001111112223333333333333332222222111111110 1111110000 0000000000 000 Q ss_pred HHHhhhhhhhccccc--chhhhhhhHHHHHHHHHHHHhhh-----c-ccC Q lcl|Aclame:pro 477 KGAMGRGKDIKGFAL--QLAEKYPDDLEDILLAVQLALAE-----R-KDN 518 (518) Q Consensus 477 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~-----~-~~~ 518 (518) .++.++.+++-+-.. ..+-..++++-.+---|--+|.+ + .|+ T Consensus 552 R~~~ar~~~vp~he~h~~l~Pv~~~~v~rli~gwd~~l~~~~~a~lg~D~ 601 (629) T protein:vir:10 552 RAQKARLAGIAPHDYHRVMGPVADADIPRLIAGWDEGLEEEALALLGVDS 601 (629) T ss_pred hhhHHHhhcCChhhceeecCCCChhHHHHHHHhhhhHHHHHHHHHhCCCh Confidence 001111111110000 00000011111110001111111 0 122 No 143 >protein:vir:8654 Length: 629 # NCBI annotation: gp12 # Family: family:all:2798 # MgeID: mge:156 # MgeName: Rosebush # Cross-refs: genbank:acc:NP_817773;genbank:gi:29566205;genbank:GeneID:1259465 Probab=99.22 E-value=3.6e-11 Score=77.85 Aligned_cols=492 Identities=15% Similarity=0.094 Sum_probs=229.1 Q ss_pred CCCCCCCCCcccccc----ccchhhhhhhccCccCCcccCccchhhH---HHHhhhHHHHHHHHHHHHhhccCceEEEEe Q lcl|Aclame:pro 1 MLLANGQTLSAPAMA----ELSPQMQDSYYYAPAVGMQLERQFSLYG---GIYKNQPWVRTVIAKRAQALARLPVKCMFT 73 (518) Q Consensus 1 ~~f~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~v~~~v~~ia~~ia~lp~~v~~~ 73 (518) .+-.|.+..+.++++ ..+..+...-...+.+ ...+....+-. +.|.-.+-++-.|.-|++.++++.+..-+. T Consensus 7 r~~rrpk~~p~~~r~~al~aas~~i~~p~~~~~ks-~~~~~~~~WQ~eAW~~~d~v~Elry~vgW~~~s~Sr~rL~as~i 85 (629) T protein:vir:86 7 RIVRRPKSEPVSTRQRALVAASQPVENPGKAFRKA-MGSSTRTDWQEDAWKAYDAVGELRYYVGWRSSSASRVRLIASAI 85 (629) T ss_pred eeeecCCCCChhhhhhhhhhhhhccccccchhhhh-cCCCchhhhhHHHHHHHHhhhhHHHHhhhhhhhhceeeeEeeee Confidence 233333333332221 1111111110000000 00111111111 233346788889999999999999998877 Q ss_pred cCCcee---eecc--h---HHHHHhhccC-ccCCHHHHHHHHHHHHHHcCCeeEEeeeCCCCce-------eeeeeeCCc Q lcl|Aclame:pro 74 SGDTET---EEHD--T---GYAKLLADPC-EYLDPFAFWEWVASTLDIYGETYLAIQKNKSGTP-------EKLMPMHPS 137 (518) Q Consensus 74 ~~~~~~---~~~~--~---~~~~l~~~PN-~~~t~~~f~~~~~~~~ll~G~~~~~i~~~~~G~~-------~~l~~l~p~ 137 (518) +.++.. ..++ + .+..+...+- ..+...++++.+..++-+-|++|+.+.....|.. .+++.+.++ T Consensus 86 dpDtg~ptg~i~e~~~~~~~v~~~v~~i~gG~lgqa~lLkr~~~~ltV~GE~wiv~~~~~~~~~d~~~~~~~eW~~vt~~ 165 (629) T protein:vir:86 86 DPDTGLPTGSIDEDDRVGARVQQIVNQIAGGALGQAQLIKRVVEQLTVAGETWVAILFTDKSRLDSNGNPVPEWLALTPE 165 (629) T ss_pred cCCCCCCccccCCCchhHHHHHHHHHhhcCChhhHHHHHHHHHhheecccceEEEEeecCCCccCCCCcchhhheeechH Confidence 644422 1222 1 2333333333 3566789999999999999999999876554432 234455555 Q ss_pred ceEEEeccCcceEEEEeeccCCCCceeEEEeeeeeEEeecCC--CCcccccchHHHHHHHHHHHHHHHHHHHHHHHHccC Q lcl|Aclame:pro 138 RVAIKRNSRTGRYEYYFQAGAGVGTQLVSFADDEVVPIRFFN--PDGLERGLSLMESLKSTIFSEDSSRNATAAMWKNAG 215 (518) Q Consensus 138 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vih~~~~~--~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~ 215 (518) -|.-. .++.. .. -+.+......+..+++ ||..+ |..-.+--||+.++...+.......+...+..+.-. T Consensus 166 ei~~~---~~~~~-i~----lP~g~~~e~~~~~d~l-~RiW~P~Prr~~e~DSpvra~l~~l~Ei~~lt~~i~aaakSRL 236 (629) T protein:vir:86 166 EVRAS---EKKTI-IE----LPTGDKHEFRDGLDGM-FRVWNPRARRAREPDSPVRANLDSLKEIVRTTKTIANASKSRL 236 (629) T ss_pred Hhhhc---cCcee-eE----cCCCCcceeeCCCceE-EEeeCCCcccccCCcchhHHHHHHHHHHHHhhhHHHHHHHHHH Confidence 44421 11211 11 1223333334444444 56444 444456889999999999999988888888888888 Q ss_pred CcceeeeeCCcCC----------------------HHHHHHHHHHHH----HHhcC--ccccccceeccC-C---ccccc Q lcl|Aclame:pro 216 RPNLVLRHEKRLS----------------------PEAQQRLREQFD----RAHAG--SSNTGKTMVVEE-G---MEPIP 263 (518) Q Consensus 216 ~p~gil~~~~~~~----------------------~e~~~~~~~~~~----~~~~g--~~n~g~~~vl~~-g---~~~~~ 263 (518) +-.|||.+|..++ ....+.+.+.|. ..+.. +..+--++|+.. | .+++- T Consensus 237 ~gnGvlflP~e~slP~~~~p~~~n~pg~~~p~~~~~pa~~~l~~~l~q~a~tAi~De~S~aA~vPiia~~P~E~i~~i~h 316 (629) T protein:vir:86 237 IGNGVVFVPHEMSLPSMNAPVASNKPGAPAPPILGTPAVQQLQELLFQVAQTAYDDEDSMAALIPMFAAAPGELIKNVTH 316 (629) T ss_pred hhCceeeeccCcccCccCCCCCCCCCCcccccccccchHHHHHHHHHHHHhhhhcCCCCccceeeeeEeechHHhcCeeE Confidence 8888876654321 112333444443 33322 122333333321 1 12233 Q ss_pred ccCC-hhhHHHHHHHHHHHHHHHHHhccchHh-hccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHhhhcchh---- Q lcl|Aclame:pro 264 LQLT-AVEMQFIEARQLNREEVCGVYDIAPPI-VHILDRATFSNISAQMRAFYRDTMAIPIARIQSAMDKYVGQYW---- 337 (518) Q Consensus 264 ~~~~-~~d~q~~e~~~~~~~~Ia~~fgVpp~~-lg~~~~~~~s~~e~~~~~~~~~~l~P~~~~ie~~ln~~l~~~~---- 337 (518) +.+. .-+.--+.+|+-.+..||..+.|||+. +|++.++|.=+.=+....-++..|.|.+..|+++|++.++... T Consensus 317 lkf~~ei~e~aiktR~daI~RlA~glDippE~LLGlGsd~NHWsAWqI~dedvrlHI~P~l~~ic~AlT~~~Lrp~Le~e 396 (629) T protein:vir:86 317 LKFDNQVTEVAIKTRNDAIARLAMGLDVSPERLLGLGSNSNHWSAWQIGDEDVRLHILPPVEMLCEAITNQVLRTVLMRE 396 (629) T ss_pred EeecCchhHHHHhhHHHHHHHHHhccCCchhhheeccCCccceEEEEecccceeeecchHHHHHHHHHHhhHHHHHHHHh Confidence 3332 223345778999999999999999965 5664455544444455556667899999999999998765421 Q ss_pred ---hccceeeechhhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHHhCCCCCCc-----cC------ceeeecccc---- Q lcl|Aclame:pro 338 ---VRKNRMKFDIDDVIQPDWEAKSESTQKMVNSGVATPNEGREIMGLPRSDDP-----KA------DELYANSAL---- 399 (518) Q Consensus 338 ---~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~T~NE~R~~~g~~pi~~~-----~g------D~~~~~~n~---- 399 (518) -..|-++||.+.|. .|+. +.+....+.+.|+||-...|+.+|+.--+.+ .| |......++ T Consensus 397 GiDp~kYvvW~DaS~Lt-~dPd-~~deA~~a~drGAIt~eAlrk~lGf~eD~~yd~tt~E~~~~~a~d~V~~~P~Li~~~ 474 (629) T protein:vir:86 397 GIDPNAYVVWHDASQLT-VDPD-KTDEARDAFDRGAITAEAMVKMLGLADDTVYDFTTPEGWAQWARDRVGQDPNLLPTL 474 (629) T ss_pred CCCHHHhEeeecCcccc-cCCC-CcHHHHHHHHcCCcCHHHHHHHhcCccccccCCCchHHHHHHHHHhhhhCcchhhhh Confidence 13477899998873 3433 3334445788999999999999999642211 11 111111111 Q ss_pred cccccccccCCCCCCCCCCC-CcccCCCCCccCCccccccccChhhhcchhHHHHHHHHHHhhccCcchhHHHHHHHHHH Q lcl|Aclame:pro 400 QPLGATPDGAVEGEEAPAPK-RPASTPVASLDQSPPASVPGLSPTNSDRSTDSGKTEPRRLMQKPPPKESSPKHLRAVKG 478 (518) Q Consensus 400 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~ 478 (518) .++- ......+.+.+... .|...+.++ ++...+...++.+.+.+...+... .+-......+. -+-.+.. T Consensus 475 a~l~--~~~a~~~~P~~~~~~pp~~e~~~~-dE~sga~~~~ep~te~d~~~~~a~------~aa~~~~~~a~-V~llv~R 544 (629) T protein:vir:86 475 AVLI--PELADVEFPTPTVALPPAEEQDGD-EEASGASRREEPDTEDDAGTDDSD------QASLDSRETAM-VEALVFR 544 (629) T ss_pred hhhh--hhhcccccCccCCCCCccccCCCc-ccccCCCcCCCCCCCCCCcccccC------CCCCCCcHHHH-HHHHHHH Confidence 1110 00011111111110 111111111 111111111111111111100000 00000000000 0011111 Q ss_pred Hhhhhhhhcccccch-------hhhhh------------hHHHHHHHHHHHHhhh----cc--cC Q lcl|Aclame:pro 479 AMGRGKDIKGFALQL-------AEKYP------------DDLEDILLAVQLALAE----RK--DN 518 (518) Q Consensus 479 ~~~~~~~~~~~~~~~-------~~~~~------------~~~~~~~~~~~~~~~~----~~--~~ 518 (518) ||.. .|+..+. ..... ..+-.+.--|.-+|++ +- |. T Consensus 545 ALel----AGkR~r~r~~~a~~r~v~~he~h~~l~Pv~~~~v~rli~gwd~~ld~~~~~~Lg~d~ 605 (629) T protein:vir:86 545 ALEL----AGKRSRTRSLPYELRQLSDRELVRRLEPVRREHVADLIRGWDSMLEERAVQALNMNI 605 (629) T ss_pred HHHh----cCCcCCChhhHHHHhccChhhcceecCCCChHHHHHHHHHHHHHHHHHHHHHhCCCH Confidence 1111 1111110 01111 1111110001111111 11 11 No 144 >protein:vir:99088 Length: 629 # NCBI annotation: gp12 # Family: family:all:2798 # MgeID: mge:1608 # MgeName: Qyrzula # Cross-refs: genbank:acc:YP_655692;genbank:gi:109521770;genbank:GeneID:4157810 Probab=99.18 E-value=6.6e-11 Score=76.39 Aligned_cols=492 Identities=15% Similarity=0.097 Sum_probs=231.2 Q ss_pred CCCCCCCCCcccccc----ccchhhhhhhccCccCCcccCccchhhH---HHHhhhHHHHHHHHHHHHhhccCceEEEEe Q lcl|Aclame:pro 1 MLLANGQTLSAPAMA----ELSPQMQDSYYYAPAVGMQLERQFSLYG---GIYKNQPWVRTVIAKRAQALARLPVKCMFT 73 (518) Q Consensus 1 ~~f~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~v~~~v~~ia~~ia~lp~~v~~~ 73 (518) .+-.|.+..+.++++ ..+..+...-...+.+ ...+...++-. +.|.-.+-++-.|.-|++.++++.+..-+. T Consensus 7 r~~rrpk~~p~~~r~~al~aas~~i~~p~~~~~ks-~~~~~~~~WQ~eAW~~~d~v~Elry~vgW~~~s~Sr~rL~as~i 85 (629) T protein:vir:99 7 RIVRRPKSEPVSTRQRALVAASQPVENPGKAFRKA-MGSSTRTDWQDDAWKAYDAVGELRYYVGWRSSSASRVRLIASAI 85 (629) T ss_pred eeeecCCCCChhhhhhhhhhhhhcccccchhhhhh-cCCCchhhhhHHHHHHHHhhhhHHHHhhhhhhhhceeeeEeeee Confidence 233333333332221 1111111110000000 00011111111 233346788889999999999999998877 Q ss_pred cCCcee---eecc--h---HHHHHhhccC-ccCCHHHHHHHHHHHHHHcCCeeEEeeeCCCCce-------eeeeeeCCc Q lcl|Aclame:pro 74 SGDTET---EEHD--T---GYAKLLADPC-EYLDPFAFWEWVASTLDIYGETYLAIQKNKSGTP-------EKLMPMHPS 137 (518) Q Consensus 74 ~~~~~~---~~~~--~---~~~~l~~~PN-~~~t~~~f~~~~~~~~ll~G~~~~~i~~~~~G~~-------~~l~~l~p~ 137 (518) +.++.. ..++ + .+..+...+- ..+...++++.+..++-+-|++|+.+.....|.. .+++.+.++ T Consensus 86 dpDtg~ptg~i~e~~~~~~~v~~~v~~i~gG~lgqa~lLkr~~~~ltV~GE~wiv~~~~~~~~~d~~~~~~~eW~~vt~~ 165 (629) T protein:vir:99 86 DPDTGLPTGSIDEDDRVGARVQQIVNQIAGGALGQAQLIKRVVEQLTVAGETWVAILFTDKSRLDSNGNPVPEWLALTPE 165 (629) T ss_pred cCCCCCCccccCCCchhHHHHHHHHHhhcCChhhHHHHHHHHHhheecccceEEEEeecCCCccCCCCcchhhheeechH Confidence 644422 1222 1 2333333333 3566789999999999999999999876554432 234455555 Q ss_pred ceEEEeccCcceEEEEeeccCCCCceeEEEeeeeeEEeecCC--CCcccccchHHHHHHHHHHHHHHHHHHHHHHHHccC Q lcl|Aclame:pro 138 RVAIKRNSRTGRYEYYFQAGAGVGTQLVSFADDEVVPIRFFN--PDGLERGLSLMESLKSTIFSEDSSRNATAAMWKNAG 215 (518) Q Consensus 138 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vih~~~~~--~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~ 215 (518) -|.-. .++.. ... +.+......+..+++ ||..+ |..-.+--||+.++...+.......+...+..+.-. T Consensus 166 ei~~~---~~~~~-i~l----P~g~~~e~~~~~d~l-~RiW~P~Prr~~e~DSpvra~l~~l~Ei~~lt~~i~aaakSRL 236 (629) T protein:vir:99 166 EVRAS---EKKTI-IEL----PTGDKHEFRDGLDGM-FRVWNPRARRAREPDSPVRANLDSLKEIVRTTKTIANASKSRL 236 (629) T ss_pred Hhhhc---cCcee-EEc----CCCCccceeCCCceE-EEeeCCCcccccCCcchhHHHHHHHHHHHHhhhHHHHHHHHHH Confidence 44421 11211 111 223333333444443 55444 444456789999999999999988888888888888 Q ss_pred CcceeeeeCCcCC----------------------HHHHHHHHHHHH----HHhcC--ccccccceeccC-C---ccccc Q lcl|Aclame:pro 216 RPNLVLRHEKRLS----------------------PEAQQRLREQFD----RAHAG--SSNTGKTMVVEE-G---MEPIP 263 (518) Q Consensus 216 ~p~gil~~~~~~~----------------------~e~~~~~~~~~~----~~~~g--~~n~g~~~vl~~-g---~~~~~ 263 (518) +-.|||.+|..++ ....+.+.+.|. ..+.. +..+--++|+.. | .+++- T Consensus 237 ~gnGvlflP~e~slP~~~~p~~~n~pg~~~p~~~~~pa~~~l~~~l~q~a~tAi~De~S~aA~vPiia~~P~E~i~~i~h 316 (629) T protein:vir:99 237 IGNGVVFVPHEMSLPSMNAPVASNKPGAPAPPILGTPAVQQLQELLFQVAQTAYDDEDSMAALIPMFAAAPGELIKNVTH 316 (629) T ss_pred hhCceeEeccCcccCccCCCCCCCCCCcccccccccchHHHHHHHHHHHHhhhhcCCCCccceeeeeEeechHHhcCeeE Confidence 8888876654321 112333444443 33322 122323333321 1 12233 Q ss_pred ccCC-hhhHHHHHHHHHHHHHHHHHhccchHh-hccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHhhhcchh---- Q lcl|Aclame:pro 264 LQLT-AVEMQFIEARQLNREEVCGVYDIAPPI-VHILDRATFSNISAQMRAFYRDTMAIPIARIQSAMDKYVGQYW---- 337 (518) Q Consensus 264 ~~~~-~~d~q~~e~~~~~~~~Ia~~fgVpp~~-lg~~~~~~~s~~e~~~~~~~~~~l~P~~~~ie~~ln~~l~~~~---- 337 (518) +.+. .-+.--+.+|+-.+..||..+.|||+. +|++.++|.=+.=+....-++..|.|.+..|+++|++.++... T Consensus 317 lkf~~ei~e~aiktR~daI~RlA~glDippE~LLGlGsd~NHWsAWqI~dedvrlHI~P~l~~ic~AlT~~~Lrp~Le~e 396 (629) T protein:vir:99 317 LKFDNQVTEVAIKTRNDAIARLAMGLDVSPERLLGLGSNSNHWSAWQIGDEDVRLHILPPVEMLCEAITNQVLRTVLMRE 396 (629) T ss_pred EeecCchhHHHHhhHHHHHHHHHhccCCchhhheeccCCccceEEEEecccceeeecchhHHHHHHHHHhhHHHHHHHHh Confidence 3332 223345778999999999999999965 5664455544444455556667899999999999998765421 Q ss_pred ---hccceeeechhhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHHhCCCCCCc-----cC------ceeeecccc---- Q lcl|Aclame:pro 338 ---VRKNRMKFDIDDVIQPDWEAKSESTQKMVNSGVATPNEGREIMGLPRSDDP-----KA------DELYANSAL---- 399 (518) Q Consensus 338 ---~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~T~NE~R~~~g~~pi~~~-----~g------D~~~~~~n~---- 399 (518) -..|-++||.+.|. .|+. +.+....+.+.|.||-...|+.+|+.--+.+ .| |......++ T Consensus 397 GiDp~kYvvW~DaS~Lt-~dPd-~~deA~~a~drGAIt~eAlrk~lGf~eD~~yd~tt~E~~~~~a~d~V~~~P~Li~~~ 474 (629) T protein:vir:99 397 GIDPNAYVVWHDASQLT-VDPD-KTDEARDAFDRGAITAEAMVKMLGLADDTVYDFTTPEGWAQWARDRVGQDPNLLPTL 474 (629) T ss_pred CCCHHHhEeeecCcccc-cCCC-CcHHHHHHHHcCCccHHHHHHHhcCccccccCCCchHHHHHHHHHhhhhCcchhhhh Confidence 13477899998873 3433 3334445788999999999999999642211 11 111111111 Q ss_pred cccccccccCCCCCCCCCCC-CcccCCCCCccCCccccccccChhhhcchhHHHHHHHHHHhhccCcchhHHHHHHHHHH Q lcl|Aclame:pro 400 QPLGATPDGAVEGEEAPAPK-RPASTPVASLDQSPPASVPGLSPTNSDRSTDSGKTEPRRLMQKPPPKESSPKHLRAVKG 478 (518) Q Consensus 400 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~ 478 (518) .++- ......+.+.+... .|...+.++ ++...+...++.+.+.+...+... .+-......+. -.-.+.. T Consensus 475 a~l~--~~~a~~~~P~~~~~~pp~~e~~~~-dE~sga~~~~ep~te~d~~~~~a~------~aa~~~~~~a~-V~llv~R 544 (629) T protein:vir:99 475 AVLI--PELADVEFPTPTVALPPAEEQDGD-EEASGASRREEPDTEDDAGTDDSD------QASLDSRETAM-VEALVFR 544 (629) T ss_pred hhhh--hhhcccccCccCCCCCccccCCCc-ccccCCCcCCCCCCCCCCcccccC------CCCCCCcHHHH-HHHHHHH Confidence 1110 00111111111111 111111111 111111111111111111110000 00000000010 0111111 Q ss_pred Hhhhhhhhcccccch-------hhhh------------hhHHHHHHHHHHHHhhh----cc--cC Q lcl|Aclame:pro 479 AMGRGKDIKGFALQL-------AEKY------------PDDLEDILLAVQLALAE----RK--DN 518 (518) Q Consensus 479 ~~~~~~~~~~~~~~~-------~~~~------------~~~~~~~~~~~~~~~~~----~~--~~ 518 (518) ||.. .|+..+. .+.. ++.+..+.--|.-+|++ +- |. T Consensus 545 ALel----AGkR~r~r~~~ar~r~v~~he~h~~l~Pv~~~~i~rli~gwd~~ld~~~~~~Lg~d~ 605 (629) T protein:vir:99 545 ALEL----AGKRSRTRSLPYELRQLSDRELVRRLEPVRREHVADLIRGWDSMLEERAVQALNMNI 605 (629) T ss_pred HHHh----cCCcCCChhhHHHHhcCchhhceeecCCCCHHHHHHHHHHHHHHHHHHHHHHhCCCH Confidence 2111 1111110 0111 22222221112222222 11 12 No 145 >protein:vir:5839 Length: 533 # NCBI annotation: similar to portal vertex protein of head # Family: family:all:1036 # MgeID: mge:123 # MgeName: RM 378 # Cross-refs: genbank:acc:NP_835625;genbank:gi:30044028 Probab=99.05 E-value=5.5e-10 Score=71.36 Aligned_cols=433 Identities=12% Similarity=0.078 Sum_probs=190.0 Q ss_pred CCCCC--CCCCccccccc---cch----hhhhhhccCccCCcccCccchhhHHHHhhhHHHHHHHHHHHHhhcc-----C Q lcl|Aclame:pro 1 MLLAN--GQTLSAPAMAE---LSP----QMQDSYYYAPAVGMQLERQFSLYGGIYKNQPWVRTVIAKRAQALAR-----L 66 (518) Q Consensus 1 ~~f~~--~~~~~~~~~~~---~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~v~~ia~~ia~-----l 66 (518) -|||- .......+.-. -.+ .+...|.+... .........|+++++.+|.|..||+.|++.+.- - T Consensus 22 ~~~~~~~p~~~dG~s~i~~~~~~~~~~~~~~~~~~gg~~--~n~~eLI~~YR~ma~~~pEVd~AideIvneaiv~d~~~~ 99 (533) T protein:vir:58 22 PMYGMGAPHGAGGSSMIPINMYHPFATAGYASRFYGGIE--FNRFFLYDMYDRMDYTDPLISTVLDIIADECTIPNENGN 99 (533) T ss_pred hhhcccCccCCCCCccccCCCCcchhhhhhhhhhhcccc--ccHHHHHHHHHHhhccCcchhhHHHhhhceeeEecCCCc Confidence 33333 22211111000 001 01111221111 111123556788888999999999999988753 2 Q ss_pred ceEEEEecCCceeeecchHHHHHhhccCccCCHHHHHHHHHHHHHHcCCeeEEeeeC-CCCceeeeeeeCCcceEEEecc Q lcl|Aclame:pro 67 PVKCMFTSGDTETEEHDTGYAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQKN-KSGTPEKLMPMHPSRVAIKRNS 145 (518) Q Consensus 67 p~~v~~~~~~~~~~~~~~~~~~l~~~PN~~~t~~~f~~~~~~~~ll~G~~~~~i~~~-~~G~~~~l~~l~p~~v~~~~~~ 145 (518) |..|...+-+ ........++.--|-...++ .+++.|+++|+.|..++-+ .++.+.+|+.|+|..++.++.. T Consensus 100 pV~v~l~~~e----~s~~iK~kI~~lldf~~~~~----~~fR~WYVDGriy~Hkiik~~k~GI~elr~lDPr~i~~vr~~ 171 (533) T protein:vir:58 100 IVDVVTKDIE----LAKAILSYLDYVINIEKNAY----PIIRNMIKYGDMFLHILEKGSDGTIEKFQVVSPYIFSKRYNP 171 (533) T ss_pred eeEeeccccc----ccHHHHHHHHHHhcchhhhh----HHHHhhhhcceeEEEeccCCcccchhhheecCCeeeEEEEee Confidence 3333322211 11111122222222233333 4556678899999888653 4566889999999999998887 Q ss_pred CcceEEEEeeccCC---CCceeEEEeeeeeEEeecCCCC-cccccchHHHHHHHHHHHHHHHHHHHHHHHHccCCcceee Q lcl|Aclame:pro 146 RTGRYEYYFQAGAG---VGTQLVSFADDEVVPIRFFNPD-GLERGLSLMESLKSTIFSEDSSRNATAAMWKNAGRPNLVL 221 (518) Q Consensus 146 ~~~~~~~~~~~~~~---~~~~~~~~~~~~vih~~~~~~~-~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~p~gil 221 (518) .+...+|-|..... .+...+.++.+.|+|+..-..+ ...+++|-|..+...+....-++....-+=-..+.-+-|+ T Consensus 172 ~t~~eyyvy~~~~~~~~s~~~~~kI~~daI~y~~SGl~d~~~~~iisyLhkAiKp~NQLkmiEDAlVIYRisRAPeRRvF 251 (533) T protein:vir:58 172 ETDTWYYVITDVYRNVVSGYFNEDIPEEDVIHFSHKIDTNFFPYGRSYLESARAIWNQLRLMEDALMLYRVVRSVDRRVF 251 (533) T ss_pred ccceEEEeecccccccccCccccccchhheeeeeeccccCCCCceehhhhHHHHHHHHHHHHHHHHHHHhhcCChhheEE Confidence 77766666543322 2334478899999998765322 3457889999998888777777665443322223223344 Q ss_pred eeCCc-C---CHHH-HHHHHHHHHHHhcCccccccce----------ecc----------CCcccccccCChhhHHHHHH Q lcl|Aclame:pro 222 RHEKR-L---SPEA-QQRLREQFDRAHAGSSNTGKTM----------VVE----------EGMEPIPLQLTAVEMQFIEA 276 (518) Q Consensus 222 ~~~~~-~---~~e~-~~~~~~~~~~~~~g~~n~g~~~----------vl~----------~g~~~~~~~~~~~d~q~~e~ 276 (518) .++-+ + ..++ +..+...+++.+.=..+.|.+. +++ .|..++.+.-. . +.-++- T Consensus 252 YIDVGNlpk~KAeqYl~~im~k~kNklvYDa~TGev~ddrk~m~~~sMlEDyWLpRReGgrgTEI~TLpGg-~-lgemeD 329 (533) T protein:vir:58 252 YVDVGNVPPDKINEYLTNIAMQYKRDYWVRNNQNQFLGIDNYFSIESILKDYFIPRRGDRRAVEIDILQGS-K-VDLAED 329 (533) T ss_pred EEeecCCCccCHHHHHHHHHHhcccceEEeccCCeEeeccchhhhhhhHhhhcccccCCCccceeeecCCC-C-CCcHHH Confidence 44321 1 2222 3334444444332222333331 111 23555555432 2 445566 Q ss_pred HHHHHHHHHHHhccchHhhccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHhhhcch-h--hccceeeechhh---- Q lcl|Aclame:pro 277 RQLNREEVCGVYDIAPPIVHILDRATFSNISAQMRAFYRDTMAIPIARIQSAMDKYVGQY-W--VRKNRMKFDIDD---- 349 (518) Q Consensus 277 ~~~~~~~Ia~~fgVpp~~lg~~~~~~~s~~e~~~~~~~~~~l~P~~~~ie~~ln~~l~~~-~--~~~~~~~fd~~~---- 349 (518) .++..+.+.++++||.+-++..+....++-=.....-...-|.-+..++.+.|.+.|+.. . ...+.+.|..+. T Consensus 330 V~YF~kkLy~ALnVP~sRl~~e~~fgr~~eItRDEiKF~KFI~rLR~rF~~ll~~qLilk~iit~eew~~~f~~Dn~f~E 409 (533) T protein:vir:58 330 VEYMLNRLISALKVPKAFIGYEGDVNAKNTLATQDIKFNNTIKRIQGFFVEELERMVRMNKEFADQDFRLVMNRSNSIVE 409 (533) T ss_pred HHHHHHHHHHHhCCCeeecCCCCCCccchhhhHHHHHHHHHHHHHHHHHHHHHhcccccccCcchhheeeeeeccchHHH Confidence 778889999999999999976443322211111112233345556667777777766421 1 112223332222 Q ss_pred hhccC-HHHHHHHHHHH---HhC-----CC--cCHHHHHHH------HhCCC-CCC--ccCceeeecccccccccccccC Q lcl|Aclame:pro 350 VIQPD-WEAKSESTQKM---VNS-----GV--ATPNEGREI------MGLPR-SDD--PKADELYANSALQPLGATPDGA 409 (518) Q Consensus 350 l~~~d-~~~~~~~~~~~---~~~-----g~--~T~NE~R~~------~g~~p-i~~--~~gD~~~~~~n~~~~~~~~~~~ 409 (518) +.... ...|..++..+ |+. -+ +| +|+.+. .+..+ .+. .+++. .| +...+.. T Consensus 410 lKe~Eil~~Ri~~l~~~dpyvgk~yi~k~ILr~t-dei~~q~e~ie~E~~~~~~~~~~~~~e~--~~-----~~~~~~~- 480 (533) T protein:vir:58 410 GERFAVIEQRIGIAERLKGWVREDWIYSNILQIP-YDLKPQEEVAEAAGGGGLFDTGGFGEET--TP-----ADFLGER- 480 (533) T ss_pred HHHHHHHHHHHHHHHHhcchhhHHHHHHHHhcCC-hhhhHHHHHHHHhhcCCCCCCCCccccc--CC-----cccCccc- Confidence 11111 11222222221 111 00 22 222221 11111 111 11111 11 1111110 Q ss_pred CCCCCCCCCCCcccCCCCC----ccCCccccccccChh----hhcchhHHHHHHHHHHhhccC Q lcl|Aclame:pro 410 VEGEEAPAPKRPASTPVAS----LDQSPPASVPGLSPT----NSDRSTDSGKTEPRRLMQKPP 464 (518) Q Consensus 410 ~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~k~~ 464 (518) .+|...+... .+..+.+..++.... +.....+. ..+.+-.+.++. T Consensus 481 ---------~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~g-~~~~~~~~p~~~ 533 (533) T protein:vir:58 481 ---------GSPIESPRGRTEFDFGTEGGEELGGELNLGGAFEEFEEETG-GGEEELPFPEEE 533 (533) T ss_pred ---------cCcccCCCChhhHhcccCCcccccccccccccchhhhhhcC-CcccCCCCCCCC Confidence 0111111000 000111000000000 00000000 000000011111 No 146 >protein:vir:98444 Length: 434 # NCBI annotation: hypothetical protein # Family: family:all:5096 # MgeID: mge:1589 # MgeName: VWB # Cross-refs: genbank:acc:NP_958276;genbank:gi:41057250;genbank:GeneID:2732828 Probab=99.05 E-value=4.8e-10 Score=71.68 Aligned_cols=371 Identities=12% Similarity=0.055 Sum_probs=175.1 Q ss_pred cCccCCcccCccchhhHHHHh--hhHHHHHHHHHHHHhhccCceEEEEecCCceeeecchHHHHHhhccCccCCHHHHHH Q lcl|Aclame:pro 27 YAPAVGMQLERQFSLYGGIYK--NQPWVRTVIAKRAQALARLPVKCMFTSGDTETEEHDTGYAKLLADPCEYLDPFAFWE 104 (518) Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~--~~~~v~~~v~~ia~~ia~lp~~v~~~~~~~~~~~~~~~~~~l~~~PN~~~t~~~f~~ 104 (518) ..+. . ....+..... ...+...+|+.+++.+--..|.+ . +. ..+..+..++.+ | ....... T Consensus 1 ~l~~---~---~~~~~~~~~~~~v~n~~~~ivd~~~~~l~~~gf~~---~-d~---~~~~~~~~i~~~-N---~~d~~~~ 63 (434) T protein:vir:98 1 MLPK---N---AEQAFLDFQRKARTNFCGLIANASVHRLLALGVTG---P-DG---EPDTRASRWWQA-N---RLDSRQK 63 (434) T ss_pred CCCC---C---ccHHHHHhhhhhhccchHHHHHHHHhhhccCceec---C-CC---chHHHHHHHHHh-c---ChhHHHH Confidence 0000 0 0111211111 22466778888777554334332 1 11 112233444433 3 2344566 Q ss_pred HHHHHHHHcCCeeEEeeeCCCCce------eeeeeeCCcceEEEeccCcceEEEEeec----cCCCC------------- Q lcl|Aclame:pro 105 WVASTLDIYGETYLAIQKNKSGTP------EKLMPMHPSRVAIKRNSRTGRYEYYFQA----GAGVG------------- 161 (518) Q Consensus 105 ~~~~~~ll~G~~~~~i~~~~~G~~------~~l~~l~p~~v~~~~~~~~~~~~~~~~~----~~~~~------------- 161 (518) .+..+++.+|.+|..+.++.++.. ..+.+++|.++.+.++...+...+.+.. .+... T Consensus 64 ~~~~~a~i~G~ay~~v~~~~~~~~~~~~~~~~I~~~~p~~~~~i~D~~~~~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~ 143 (434) T protein:vir:98 64 LVWRMAMAQSAGYMLVGAHPTRTEDNGRPSPLITMEHPSECIVEYDPETGEPLVGLKVWHNDIDGFGYARVFFDDTSFPY 143 (434) T ss_pred HHHHHHhhcCceEEEEecCCCcccccCCceeEEEEeccceeEEEEeCCCCceEEEEEEEEeccCCceEEEEEEeCcEEEE Confidence 788899999999998876654422 2367788999888887543222111100 00000 Q ss_pred -------------------------ceeEEEeeeeeEEeecCCCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHccCC Q lcl|Aclame:pro 162 -------------------------TQLVSFADDEVVPIRFFNPDGLERGLSLMESLKSTIFSEDSSRNATAAMWKNAGR 216 (518) Q Consensus 162 -------------------------~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~ 216 (518) .....+..-.|+||.++...+ ..|.|.++.....++....+.-...+..+-.+. T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~g~vPvv~f~N~~~~~-~~g~sd~e~vi~liDa~~~~~s~~~~~~~~~a~ 222 (434) T protein:vir:98 144 RTRERTGARLPWGPDSWVYTGTADSGDVHDLGGMQLVEFARMPDLG-EDPEPEFAGVLDIQDRVNLGILNRMAASRFSGF 222 (434) T ss_pred EEeeccccccccccccceecccccccccCCCCccceEEeccCCCcC-cCCcchhhhHHHHHHHHHHHHHHHHHHHHHhcc Confidence 000112223466666543322 358999988888888888776666666666666 Q ss_pred cceeeeeC--CcCCHHHHHHHHHHHHHHhcCccccccceecc-CCcccccccCChhhHHHHHHHHHHHHHHHHHhccchH Q lcl|Aclame:pro 217 PNLVLRHE--KRLSPEAQQRLREQFDRAHAGSSNTGKTMVVE-EGMEPIPLQLTAVEMQFIEARQLNREEVCGVYDIAPP 293 (518) Q Consensus 217 p~gil~~~--~~~~~e~~~~~~~~~~~~~~g~~n~g~~~vl~-~g~~~~~~~~~~~d~q~~e~~~~~~~~Ia~~fgVpp~ 293 (518) |.-++.-. ....++. ......++. ... ..+++..++ ++.++.++..+.- -.+++.++..+..|+..=++|++ T Consensus 223 p~~~i~G~~~~~~~~~~-~~~~~~~~~-~~~--~~~~i~~~~~~~~~~~q~~~~~~-~~~~~~l~~~i~~~~~~~~~p~~ 297 (434) T protein:vir:98 223 RQKWIKGHKFAKRTDPA-TGMTVVDQP-FVP--SPSAVWASEGENTQFGQLDATDL-SGFLKEHASDVRDMLTISQTPTY 297 (434) T ss_pred hhhhhcCCCcccccccc-cccchhhhh-hhc--cccccccCCCCCceEEEecCcch-HHHHHHHHHHHHHHhcccCCCHH Confidence 66555321 1111111 111112221 111 123455555 3566655543322 23777788889999999999999 Q ss_pred hhccccccccccHHHHHHHHHHHHHHHHHHHHHH----HHHhhh---c---chhhccceeeechhhhhccCHHHHHHHHH Q lcl|Aclame:pro 294 IVHILDRATFSNISAQMRAFYRDTMAIPIARIQS----AMDKYV---G---QYWVRKNRMKFDIDDVIQPDWEAKSESTQ 363 (518) Q Consensus 294 ~lg~~~~~~~s~~e~~~~~~~~~~l~P~~~~ie~----~ln~~l---~---~~~~~~~~~~fd~~~l~~~d~~~~~~~~~ 363 (518) .+|... +.++.++ ..+....+.-.+...+. .|.+.+ + ........+++.+.+....+..+.++.+. T Consensus 298 ~~~~~~--~n~Sg~A--l~~~~~~l~~k~~~k~~~f~~~l~~~~rl~~~~~g~~~~~~~~~v~w~~~~~~s~~~~ada~~ 373 (434) T protein:vir:98 298 LYATDL--VNISADT--IGALDILHVAKVREHIASFSEGLESVLALAAAQAGVPEDYTEAEVRWANPAHVTMAVKADAAT 373 (434) T ss_pred Hhcccc--CChHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhheeeeEEecCCCCCCHHHHHHHHH Confidence 998521 1222222 12222222222222222 222111 1 11112234556667778889999999999 Q ss_pred HHHhCCCcCHHHHHHHHhCCCCCCccCceeeecccccccccccccCCCCCCCCCCCCcccCCCCCccCCcccccc Q lcl|Aclame:pro 364 KMVNSGVATPNEGREIMGLPRSDDPKADELYANSALQPLGATPDGAVEGEEAPAPKRPASTPVASLDQSPPASVP 438 (518) Q Consensus 364 ~~~~~g~~T~NE~R~~~g~~pi~~~~gD~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 438 (518) +++..|+ +..-+++.+|+.+-+ -+++.--..-..+.. ....+..+++ +.+..+++..+..+ T Consensus 374 kl~~~g~-~~e~~~~~lg~~~~e---~~r~~~e~~~~~~~~-------~~~~~~~~~~---~~g~~~~~~~~~dg 434 (434) T protein:vir:98 374 KLKSIGY-PLDVIAEELDESPAR---VRRIVAGAASQALLA-------ASLLPAPGAP---SAGNVPDSGGAVDG 434 (434) T ss_pred HHHhcCC-cHHHHHHhCCCCHHH---HHHHHHHHHHHHHHH-------HhhhccCCCC---CCCCCCcccCCCCC Confidence 9998885 677788888875421 111100000000000 0001111111 11111111100000 No 147 >protein:vir:104082 Length: 485 # NCBI annotation: gp14 # Family: family:all:524 # MgeID: mge:1656 # MgeName: Che12 # Cross-refs: genbank:acc:YP_655593;genbank:gi:109392464;genbank:GeneID:4156950 Probab=99.05 E-value=4.3e-10 Score=71.92 Aligned_cols=411 Identities=15% Similarity=0.092 Sum_probs=169.5 Q ss_pred CCCCCCCCccccccc-cchhh--------------hhhhccCccCCcccCcc-chhhHHHHhhhHHHHHHHHHHHHhhcc Q lcl|Aclame:pro 2 LLANGQTLSAPAMAE-LSPQM--------------QDSYYYAPAVGMQLERQ-FSLYGGIYKNQPWVRTVIAKRAQALAR 65 (518) Q Consensus 2 ~f~~~~~~~~~~~~~-~~~~~--------------~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~v~~~v~~ia~~ia~ 65 (518) |=|+=+......... ....+ ...+.+.... ..+... ....+.......+...+|+.++..+.- T Consensus 1 ~~~~i~~~~~~~~~~~~~~~l~~~~~~~~~r~~~~~~Yy~G~~~i-~~~~~~~~~~~~~~~~~~n~~~~ivd~~~~~l~~ 79 (485) T protein:vir:10 1 MTAPLPGQEEIEDPAIARDEMVSAFEDSTQNLKTNTSYYEAERRP-EAIGVTVPIQMQSLLAHVGYPRLYVDSIAERQAV 79 (485) T ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcc-hhcCCCCChhhhhhhhhcCcHHHHHHHHHhhhcc Confidence 333322221111111 00000 0011111000 000100 011122222334666777777765533 Q ss_pred CceEEEEecCCceeeecchHHHHHhhccCccCCHHHHHHHHHHHHHHcCCeeEEeeeCCCCc-------eeeeeeeCCcc Q lcl|Aclame:pro 66 LPVKCMFTSGDTETEEHDTGYAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQKNKSGT-------PEKLMPMHPSR 138 (518) Q Consensus 66 lp~~v~~~~~~~~~~~~~~~~~~l~~~PN~~~t~~~f~~~~~~~~ll~G~~~~~i~~~~~G~-------~~~l~~l~p~~ 138 (518) .+|.+ .++. ..+..+..++.+ -....+...+..+++.+|.||..+.++..+. ...+.+++|.. T Consensus 80 ~g~~~---~~~~---~~~~~~~~i~~~----N~~d~~~~~~~~~a~i~G~ay~~v~~~e~~~~~~~~~~~~~i~~~~p~~ 149 (485) T protein:vir:10 80 EGFRF---GDAD---EADEELWQWWQA----NNLDIEAPLGYTDAYVHGRSYITISRPDPQIDLGWDPNTPIIRVEPPTR 149 (485) T ss_pred cceec---CCCc---hhHHHHHHHHHh----cCHhHHHHHHHHHHhhcCceEEEEeeCCcccccccCCCeeEEEEEccce Confidence 33332 1111 112233344432 2345667788999999999999887765432 22477788888 Q ss_pred eEEEeccCcceEEE--EeeccCCCC---------------------c------eeEEEeeeeeEEeecCCCCcccccchH Q lcl|Aclame:pro 139 VAIKRNSRTGRYEY--YFQAGAGVG---------------------T------QLVSFADDEVVPIRFFNPDGLERGLSL 189 (518) Q Consensus 139 v~~~~~~~~~~~~~--~~~~~~~~~---------------------~------~~~~~~~~~vih~~~~~~~~~~~G~s~ 189 (518) +.+.++...+...+ .+......+ + ....+..-.|+||.+....+..+|.|. T Consensus 150 ~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~g~vPvv~~~n~~~~~~~~G~s~ 229 (485) T protein:vir:10 150 MYAEIDPRIGRVSKAIRVAYDAEGNEIQAATLYTPNDIFGWYRVENEWQEWFNNPHGLGVVPVVPIPNRTRLSDLYGTSE 229 (485) T ss_pred eEEEEcCCCCceeEEEEEEEeeCCCeEEEEEEEeCCeEEEEEEcCCceEEeccccCCCCcccEEEeccccccCCCCCccc Confidence 88887654432211 111111000 0 001112234566665544455678886 Q ss_pred HHH-HHHHHHHHHHHHHHHHHHHHccCCcceeeeeCCcCCHHHH--HHHHHHHHHHhcCccccccceecc-CCccccccc Q lcl|Aclame:pro 190 MES-LKSTIFSEDSSRNATAAMWKNAGRPNLVLRHEKRLSPEAQ--QRLREQFDRAHAGSSNTGKTMVVE-EGMEPIPLQ 265 (518) Q Consensus 190 ~~~-~~~~i~~~~~~~~~~~~~~~ng~~p~gil~~~~~~~~e~~--~~~~~~~~~~~~g~~n~g~~~vl~-~g~~~~~~~ 265 (518) +.. +...++....+..-......-.+.|.-++... ...+... ..-...|.. ..+.+..++ ++.++..+. T Consensus 230 i~~~v~~liDa~~~~~s~~~~~~~~~a~p~~~i~G~-~~~~~~~~~~~~~~~~~~------~~~~i~~~~~~d~k~~q~~ 302 (485) T protein:vir:10 230 ITPELRSMTDAAARILMLMQATAELMGVPQRLIFGI-KPEEIGVDPETGQTLFDA------YLARILAFEDAEGKIQQFS 302 (485) T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHhcC-Ccccccccccccchhhhh------cccceeccCCCCceEEeec Confidence 653 23333333332222233333334444433311 0000000 000111211 123455554 456665554 Q ss_pred CChhhHHHHHHHHHHHHHHHHHhccchHhhccccccccccHHHHH-------------HHHHHHHHHHHHHHHHHHHHhh Q lcl|Aclame:pro 266 LTAVEMQFIEARQLNREEVCGVYDIAPPIVHILDRATFSNISAQM-------------RAFYRDTMAIPIARIQSAMDKY 332 (518) Q Consensus 266 ~~~~d~q~~e~~~~~~~~Ia~~fgVpp~~lg~~~~~~~s~~e~~~-------------~~~~~~~l~P~~~~ie~~ln~~ 332 (518) ...- .-+++.++..+..|+.+=++|+..+|.... +.++.++.. ...+...+.-.++.+.. +... T Consensus 303 ~~~~-~~~~~~l~~~i~~~~~~~~~p~~~fg~~~~-n~~Sg~Al~~~~~~l~~k~~~k~~~f~~~l~~~~~l~~~-~~~~ 379 (485) T protein:vir:10 303 AAEL-ANFTNALDQIAKQVAAYTGLPPQYLSTAAD-NPASAEAIRAAESRLIKKVERKNSIFGGAWEEAMRLAYR-MMKG 379 (485) T ss_pred ccch-HHHHHHHHHHHHHHhcccCCCHHHhccccC-chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhCC Confidence 3322 237777888888899999999999875432 222222111 11111222222221111 1000 Q ss_pred hcchhhccceeeechhhhhccCHHHHHHHHHHHHhCC--CcCHHHHHHHHhCCCCCCccCceeeeccc---ccccccccc Q lcl|Aclame:pro 333 VGQYWVRKNRMKFDIDDVIQPDWEAKSESTQKMVNSG--VATPNEGREIMGLPRSDDPKADELYANSA---LQPLGATPD 407 (518) Q Consensus 333 l~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g--~~T~NE~R~~~g~~pi~~~~gD~~~~~~n---~~~~~~~~~ 407 (518) .........+++.+.+.+..+..+.++.+.+++.+| +++..-+++.+|+.+-+-.......-... ...++.... T Consensus 380 -~~~~~~~~~i~v~w~~~~~~~~~~~ada~~kl~~ag~~~~s~et~~~~lg~~~~~~~~~~~~~ee~~~~~~~~~~~~~~ 458 (485) T protein:vir:10 380 -GDVPPDMLRMETVWRDPSTPTYAAKADAASKLYNGGTGVIPRERARKDMGYSIAEREEMRRWDEEEAAMGLGLIGTMVD 458 (485) T ss_pred -CCCcccceeeeEEecCCCCCCHHHHHHHHHHHHhccccCCCHHHHHHhCCCCHhHHHHHHHHHHHHHHHHHHHHHHhhc Confidence 000011235566666777889999999999999866 88888899998886532111110000000 000000000 Q ss_pred cCCCCCCCCCCCCcccCCCCCccCCccccccccCh Q lcl|Aclame:pro 408 GAVEGEEAPAPKRPASTPVASLDQSPPASVPGLSP 442 (518) Q Consensus 408 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 442 (518) .... .+..+++ .++.+.+....+++.+ T Consensus 459 ~~~~---~~~~~~~-----~~~~~~~~~~~~~~~~ 485 (485) T protein:vir:10 459 PNPT---VPGSPSP-----APAPKPAALESGGDAA 485 (485) T ss_pred cCCC---CCCCCCc-----cccccCcCCCCCCCCC Confidence 0000 0000000 0000000000011111 No 148 >protein:vir:7768 Length: 484 # NCBI annotation: gp14 # Family: family:all:524 # MgeID: mge:149 # MgeName: Bxz2 # Cross-refs: genbank:acc:NP_817602;genbank:gi:29566032;genbank:GeneID:1259226 Probab=99.03 E-value=1.8e-10 Score=74.05 Aligned_cols=404 Identities=14% Similarity=0.124 Sum_probs=171.6 Q ss_pred CCCccccccccch-----hhhh--------------hhccCcc---CCcccCccchhhHHHHhhhHHHHHHHHHHHHhhc Q lcl|Aclame:pro 7 QTLSAPAMAELSP-----QMQD--------------SYYYAPA---VGMQLERQFSLYGGIYKNQPWVRTVIAKRAQALA 64 (518) Q Consensus 7 ~~~~~~~~~~~~~-----~~~~--------------~~~~~~~---~~~~~~~~~~~~~~~~~~~~~v~~~v~~ia~~ia 64 (518) -+.+.|..-.+.+ ++.. .+.+... .+..+. ...........+...+|+..+..+- T Consensus 1 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~rl~~l~~Yy~G~~~i~~~~~~~~---~~~~~~~~~~n~~~~ivd~~~~~l~ 77 (484) T protein:vir:77 1 MTSPLQKQENVDPEKAREEMLNLFTERTQDLGDNTAYYESERRPDAVGVTVP---QQMQKLLAHVGYPRLYIDAIAARQE 77 (484) T ss_pred CCCcccccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchhcccccc---hhHHhhhhhcCcHHHHHHHHHhhhc Confidence 1111111111111 0111 1111100 000000 1111222334566677777776655 Q ss_pred cCceEEEEecCCceeeecchHHHHHhhccCccCCHHHHHHHHHHHHHHcCCeeEEeeeCCCCce-------eeeeeeCCc Q lcl|Aclame:pro 65 RLPVKCMFTSGDTETEEHDTGYAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQKNKSGTP-------EKLMPMHPS 137 (518) Q Consensus 65 ~lp~~v~~~~~~~~~~~~~~~~~~l~~~PN~~~t~~~f~~~~~~~~ll~G~~~~~i~~~~~G~~-------~~l~~l~p~ 137 (518) -.+|.+ .++ ...+..+..++.+ | ........+..+++.+|.+|..+.++.+|.+ ..+.+++|. T Consensus 78 ~~g~~~---~~~---~~~~~~l~~i~~~-N---~~d~~~~~~~~~a~~~G~a~~~v~~~~~~~~~~~~~~~~~i~~~~p~ 147 (484) T protein:vir:77 78 LEGFRL---GGA---DKADEQLWDWWQA-N---DLDIESTLGHTDSLVHGRSYITISKPDPNIDPGVDPEVPIIRVEPPT 147 (484) T ss_pred cCceec---CCc---chhHHHHHHHHHh-c---CHhHHHHHHHHHHhhcCceEEEEecCCCCcccccccccceEEEeccc Confidence 445442 111 1112333444432 2 3345667788999999999999888877753 246778888 Q ss_pred ceEEEeccCcceEEEEe--eccCC---------------------CC------ceeEEEeeeeeEEeecCCCCcccccch Q lcl|Aclame:pro 138 RVAIKRNSRTGRYEYYF--QAGAG---------------------VG------TQLVSFADDEVVPIRFFNPDGLERGLS 188 (518) Q Consensus 138 ~v~~~~~~~~~~~~~~~--~~~~~---------------------~~------~~~~~~~~~~vih~~~~~~~~~~~G~s 188 (518) .+.+.++...+...+.+ ..... .+ .....+..-.|+||.+....+..+|.| T Consensus 148 ~~~~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~g~vPvv~f~N~~~~~~~~G~s 227 (484) T protein:vir:77 148 NLYAQIDPRTRQVMRAIRAIEDEEGNEVIGATLYLPNNTVIWNREDGQWVQVANVAHNLEMVPVIPIPNRTRLSDLYGTT 227 (484) T ss_pred eeEEEecCCCCceEEEEEEEEeecCCcEEEEEEEecCeEEEEEecCCceEeeccccCCCCCcceEEeccccccCccCCcc Confidence 88877765433221111 00000 00 000112223367777655555667888 Q ss_pred HHHH-HHHHHHHHHHHHHHHHHHHHccCCcceeeeeCCcCCHHHH--HHHHHHHHHHhcCccccccceecc-CCcccccc Q lcl|Aclame:pro 189 LMES-LKSTIFSEDSSRNATAAMWKNAGRPNLVLRHEKRLSPEAQ--QRLREQFDRAHAGSSNTGKTMVVE-EGMEPIPL 264 (518) Q Consensus 189 ~~~~-~~~~i~~~~~~~~~~~~~~~ng~~p~gil~~~~~~~~e~~--~~~~~~~~~~~~g~~n~g~~~vl~-~g~~~~~~ 264 (518) .+.. +...++....+..-........+.|.-++.-- ...+... ..-...|.. ..+++..++ ++.++..+ T Consensus 228 ~i~~~v~~L~Da~~~~~s~~~~~~~~~a~p~~~i~G~-~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~q~ 300 (484) T protein:vir:77 228 EITPELRSVTDAAARTLMLMQATAELMGVPQRLLFGV-KGEELGVDPETGQTLFDA------YLARILAFEDHESKAQQF 300 (484) T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHhCC-Ccchhcccccccchhhhh------hhhhhcccCCCCceeEee Confidence 7653 32333333333322233333334454444311 1111000 001111221 123455555 45666665 Q ss_pred cCChhhHHHHHHHHHHHHHHHHHhccchHhhccccccccccHHHHHHHHHHHHHHHHHHH----HHHHHHhh------hc Q lcl|Aclame:pro 265 QLTAVEMQFIEARQLNREEVCGVYDIAPPIVHILDRATFSNISAQMRAFYRDTMAIPIAR----IQSAMDKY------VG 334 (518) Q Consensus 265 ~~~~~d~q~~e~~~~~~~~Ia~~fgVpp~~lg~~~~~~~s~~e~~~~~~~~~~l~P~~~~----ie~~ln~~------l~ 334 (518) ....-+ -|++.++..+..|+.+-++|++.+|.... +.++.++.. +....|.-.+.. +...|.+. +. T Consensus 301 ~~~~~e-~~~~~l~~~i~~~s~~~~~p~~~fg~~~~-n~~Sg~Al~--~~~~~l~~ka~~k~~~f~~~l~~~~~l~~~~~ 376 (484) T protein:vir:77 301 SAAELR-NFVDALDALDRKAAAYTGLPPYYLSFSSE-NPASAEAIR--SSESRLVKTVERKNKIFGGAWEQAMRVAYKVM 376 (484) T ss_pred cCCChH-HHHHHHHHHHHHHhcccCCCHHHhccccC-cchHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh Confidence 543322 37778888888999999999999986432 212222221 111111111111 11111111 11 Q ss_pred ch---hhccceeeechhhhhccCHHHHHHHHHHHHhCC--CcCHHHHHHHHhCCCCCCccCceeeeccc---cccccccc Q lcl|Aclame:pro 335 QY---WVRKNRMKFDIDDVIQPDWEAKSESTQKMVNSG--VATPNEGREIMGLPRSDDPKADELYANSA---LQPLGATP 406 (518) Q Consensus 335 ~~---~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g--~~T~NE~R~~~g~~pi~~~~gD~~~~~~n---~~~~~~~~ 406 (518) .. ......+++.+.+....+..+.++.+.+++.+| +++..-+++++|+-+-+-.......-... ..-++... T Consensus 377 ~~~~~~~~~~~i~v~w~~~~~~s~~~~ad~~~kl~~~g~gi~s~et~~~~l~~~~~~~~e~~~~~~ee~~~~~~~~~~~~ 456 (484) T protein:vir:77 377 NGGDIPPEYYRMESIWRDPSTPTYAAKADAATKLYNNGQGVIPKERARIDMGYSITEREEMRKWDEEEQAQGLGLMGTMF 456 (484) T ss_pred CCCCcccccccceEEecCCCCCCHHHHHHHHHHHHhccCCCCCHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHhhhc Confidence 00 011134556666777888899999999999876 88888888988875432111110000000 00000000 Q ss_pred ccCCCCCCCCCCCCcccCCCCCccCCccccccccChhhhcchh Q lcl|Aclame:pro 407 DGAVEGEEAPAPKRPASTPVASLDQSPPASVPGLSPTNSDRST 449 (518) Q Consensus 407 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 449 (518) .. .+...+.+ +.+..+++ .++.+ .... . T Consensus 457 ~~-----~~~~~~~~-~~~~~~~~-~~~~~---~~~~-----~ 484 (484) T protein:vir:77 457 GT-----DPSGGGNP-DNPETPEP-QPNPA---EEAA-----A 484 (484) T ss_pred cc-----cccCCCCC-CCCCcccc-cCCCc---cccC-----C Confidence 00 00000000 00000000 00000 0000 0 No 149 >protein:vir:99916 Length: 504 # NCBI annotation: gp3 # Family: family:all:524 # MgeID: mge:1611 # MgeName: Halo # Cross-refs: genbank:acc:YP_655520;genbank:gi:109392290;genbank:GeneID:4157085 Probab=99.01 E-value=6.1e-09 Score=65.64 Aligned_cols=415 Identities=14% Similarity=0.112 Sum_probs=165.5 Q ss_pred CCCCCCCCCcccccccc---chhhhhh-----------------hccCcc---CCcccCccchhhHHHHhhhHHHHHHHH Q lcl|Aclame:pro 1 MLLANGQTLSAPAMAEL---SPQMQDS-----------------YYYAPA---VGMQLERQFSLYGGIYKNQPWVRTVIA 57 (518) Q Consensus 1 ~~f~~~~~~~~~~~~~~---~~~~~~~-----------------~~~~~~---~~~~~~~~~~~~~~~~~~~~~v~~~v~ 57 (518) -++....+-++...... ..|+..+ +.+... .+..+. ..++.......+..-+|+ T Consensus 3 ~~~~~~~~~~~~~~~l~~~e~~~i~~L~~~~~~~~~r~~~l~~YY~G~~~i~~~~~~~p---~~~~~~~~v~n~~~~iVd 79 (504) T protein:vir:99 3 EETTSASKFTFRIPELNDDVVDKVNGLYQQLVDRTPRNLLRASFYDGKYAIRQIGNLIP---PEYLRTATVLGWSAKAVD 79 (504) T ss_pred ccCCcccccccccCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhccccchhcccccc---HHHHHHhhccCcHHHHHH Confidence 11111111111100000 0011111 111100 111111 111222223455566777 Q ss_pred HHHHhhccCceEEEEecCCceeeecchHHHHHhhccCccCCHHHHHHHHHHHHHHcCCeeEEeeeCCCCcee-eeeeeCC Q lcl|Aclame:pro 58 KRAQALARLPVKCMFTSGDTETEEHDTGYAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQKNKSGTPE-KLMPMHP 136 (518) Q Consensus 58 ~ia~~ia~lp~~v~~~~~~~~~~~~~~~~~~l~~~PN~~~t~~~f~~~~~~~~ll~G~~~~~i~~~~~G~~~-~l~~l~p 136 (518) .+++.+.--.|.+ .++ ...+..++.++.. |.. ......+..+.+++|.+|+.+..+.+|.+. .+.+++| T Consensus 80 ~~a~rl~~~Gf~~---~d~---~~~~~~l~~i~~~-N~l---d~~~~~~~~~a~iyG~af~~v~~~~d~~~~~~I~~~sP 149 (504) T protein:vir:99 80 TLARRCNLESFVW---PDG---DYGSIGGPDVWDE-NFF---ATKANNAMVSSLIHGPAFLINTEGGAGEPDSLIHVKSA 149 (504) T ss_pred HHHhhhccceeeC---CCC---ChhhHHHHHHHHh-cCh---hhHHHHHHHHHHhhCceeEEEecCCCCCceeEEEEecc Confidence 7776543333322 111 1112234444433 332 345567888999999999998888888754 5678899 Q ss_pred cceEEEeccCcceEEEEe--eccCCCCcee--EEEeeee------------------------eEEeecCCCCcccccch Q lcl|Aclame:pro 137 SRVAIKRNSRTGRYEYYF--QAGAGVGTQL--VSFADDE------------------------VVPIRFFNPDGLERGLS 188 (518) Q Consensus 137 ~~v~~~~~~~~~~~~~~~--~~~~~~~~~~--~~~~~~~------------------------vih~~~~~~~~~~~G~s 188 (518) ..+.+++++..+.+.+.+ ...+..+... ..+.+.. |++|.+....+..+|.| T Consensus 150 ~~~~~iyD~~~~~~~~a~~~~~~d~~g~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~gvPvV~~~n~~~~~~~~G~s 229 (504) T protein:vir:99 150 MQATGEWNSRRNAMDSLLSITSRDAEGHPTGIALYEDGVTVTADMDDDGDWHADVRTHKLGVPVEVLPYKPREDRPLGSS 229 (504) T ss_pred ceeEEEEeCCCCceeEEEEEEEecCCCeEEEEEEEcCCcEEEEEEcCCceeeeccccCCCCcceEEecccccCccccCcc Confidence 999888876443322211 1111111100 0112222 45555443334456777 Q ss_pred HHH----HHHHHHHHHHHHHHHHHHHHHccCCcceeee-eC-CcCCH---HHHHHHHHHHHHHhcCccccccceecc-CC Q lcl|Aclame:pro 189 LME----SLKSTIFSEDSSRNATAAMWKNAGRPNLVLR-HE-KRLSP---EAQQRLREQFDRAHAGSSNTGKTMVVE-EG 258 (518) Q Consensus 189 ~~~----~~~~~i~~~~~~~~~~~~~~~ng~~p~gil~-~~-~~~~~---e~~~~~~~~~~~~~~g~~n~g~~~vl~-~g 258 (518) .+. .+...+.....-......||. .|.-++. .. ....+ .....++......+.=.. .....+.. .+ T Consensus 230 ei~~~v~~l~Da~~~~~~~~~~~~e~~a---~p~r~i~G~~~~~~~~~d~~~~~~~~~~~~~i~~~~~-~~~~~~~~~~~ 305 (504) T protein:vir:99 230 RITRPVMSLQQRALKGCIRMDGHADVYS---FPQLILLGADAKNFRNKDGSMKPAWQIALARVFALPD-DEDEPDAARAR 305 (504) T ss_pred cchhhHHHHHHHHHHHHHHHHHHHHHhc---chhhhhccCCccccccccccccchhhhhhhhhhcCCC-ccccccccCcc Confidence 543 333333333322222333333 3332221 11 11111 111222222222111111 11111111 12 Q ss_pred cccccccCChhhHH-HHHHHHHHHHHHHHHhccchHhhccccccccccHHHHHHHHHHHHHHH----HHHHHHHHHHhh- Q lcl|Aclame:pro 259 MEPIPLQLTAVEMQ-FIEARQLNREEVCGVYDIAPPIVHILDRATFSNISAQMRAFYRDTMAI----PIARIQSAMDKY- 332 (518) Q Consensus 259 ~~~~~~~~~~~d~q-~~e~~~~~~~~Ia~~fgVpp~~lg~~~~~~~s~~e~~~~~~~~~~l~P----~~~~ie~~ln~~- 332 (518) .++..+.. .+++ |++.++..+..|+.+=++|++.+|+.+..+.++.++.. +....|.- ..+.+.+.|.+. T Consensus 306 ~~~~q~~~--~~l~~~~~~l~~~i~~~a~~t~~P~~~lG~~~~~n~sSa~Ai~--~~~~~L~~ka~~k~~~f~~~l~~~~ 381 (504) T protein:vir:99 306 ADVKQFPA--SSPQPHIEMLEQIAMMFSGETSIPVESLGFSNRANPTSADAYI--ASREDLIAEAEGATDDWSPAFRRSM 381 (504) T ss_pred ceeeecCC--CChHHHHHHHHHHHHHHHhhhCCCHHHhcccccccccHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHH Confidence 34433332 3333 78889999999999999999999976554444444332 11112221 122222223221 Q ss_pred -----hcch----hhccceeeechhhhhccCHHHHHHHHHHHHhCCCcC--H-HHHHHHHhCCCCCCc-cCceeeecccc Q lcl|Aclame:pro 333 -----VGQY----WVRKNRMKFDIDDVIQPDWEAKSESTQKMVNSGVAT--P-NEGREIMGLPRSDDP-KADELYANSAL 399 (518) Q Consensus 333 -----l~~~----~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~T--~-NE~R~~~g~~pi~~~-~gD~~~~~~n~ 399 (518) +... ......+++.|.+....+..+.++.+.++++.|... . .-+.+++|+.+-+-. .-++.-..... T Consensus 382 rla~~~~~~~~~~~~~~~~~~v~w~d~~~~s~a~~aDa~~Kl~~ag~~l~~~~~~l~~~lg~~~~ei~r~~~e~~~~~~~ 461 (504) T protein:vir:99 382 IRALAIKNGLDRIPPEWKTIDSKFRSPLYLSKAAQADAGAKMLGAGPEWLKETEVGLELLGLTPQQAKRALAERRRASSV 461 (504) T ss_pred HHHHHHhcCCCccccccccceeEecCCCccCHHHHHHHHHHHHhhccccccchHHHHhhcCCCHHHHHHHHHHHHHHhhH Confidence 1010 011234455566777888899999999999988633 2 335566777543200 00000000000 Q ss_pred cccccc------cccCCCCCCCCCCCCcccCCCCCccCCccccccccChhhhcchhHHH Q lcl|Aclame:pro 400 QPLGAT------PDGAVEGEEAPAPKRPASTPVASLDQSPPASVPGLSPTNSDRSTDSG 452 (518) Q Consensus 400 ~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 452 (518) ..++.. ..+....+..+....+.+++. .... ++...| T Consensus 462 ~~~~~l~~~~~~~~~~~~~~~~~~~e~a~~~~~-~~~~---------------~p~~~~ 504 (504) T protein:vir:99 462 SIIEALNRRQQEAATAGEDQDQGAGEPPANEPP-AALG---------------RPTLVG 504 (504) T ss_pred HHHHHHhcccCCCCCCCCCCCcCCCCCCCCCCC-ccCC---------------CcccCC Confidence 000000 000000011111000111111 1111 111111 No 150 >protein:vir:2341 Length: 488 # NCBI annotation: gp11 # Family: family:all:524 # MgeID: mge:51 # MgeName: Bxb1 # Cross-refs: genbank:acc:NP_075278;genbank:gi:12657865;genbank:GeneID:920078 Probab=99.00 E-value=5e-10 Score=71.58 Aligned_cols=410 Identities=13% Similarity=0.124 Sum_probs=164.0 Q ss_pred CCCCCCCccccccccc----------h---hhhhhhccCcc---CCcccCccchhhHHHHhhhHHHHHHHHHHHHhhccC Q lcl|Aclame:pro 3 LANGQTLSAPAMAELS----------P---QMQDSYYYAPA---VGMQLERQFSLYGGIYKNQPWVRTVIAKRAQALARL 66 (518) Q Consensus 3 f~~~~~~~~~~~~~~~----------~---~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~v~~~v~~ia~~ia~l 66 (518) +....+..... .+. + .+...+.+... .+..+. ...+.......+...+|+.+++.+--- T Consensus 1 ~~~~~~~d~~~--~i~~L~~~~~~~~~r~~~~~~Yy~g~~~i~~~~~~~~---~~~~~~~~~~n~~~~ivd~~a~~l~~~ 75 (488) T protein:vir:23 1 MAETESIDPEK--LRDQLLDAFENKQNELKSSKAYYDAERRPDAIGLAVP---LDMRKYLAHVGYPRTYVDAIAERQELE 75 (488) T ss_pred CCcccCCCHHH--HHHHHHHHHHHHHHHHHHHHHHHhcccchhhcCcccc---hhhhhhhhhcchHHHHHHHHHHhhhcc Confidence 22222222110 000 0 00000111100 011111 111122233456667777777655444 Q ss_pred ceEEEEecCCc----eeeecchHHHHHhhccCccCCHHHHHHHHHHHHHHcCCeeEEeeeCC--------CCceeeeeee Q lcl|Aclame:pro 67 PVKCMFTSGDT----ETEEHDTGYAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQKNK--------SGTPEKLMPM 134 (518) Q Consensus 67 p~~v~~~~~~~----~~~~~~~~~~~l~~~PN~~~t~~~f~~~~~~~~ll~G~~~~~i~~~~--------~G~~~~l~~l 134 (518) .|.+-...... ........+..++. -| ........+..+++.+|.+|..+.... .|. ..+.++ T Consensus 76 Gf~~~~~~~~~~~~~~d~~~~~~l~~i~~-~N---~~~~~~~~~~~~a~i~G~a~~~v~~~~~~~~~~~~~~~-~~i~~~ 150 (488) T protein:vir:23 76 GFRIPSANGEEPESGGENDPASELWDWWQ-AN---NLDIEATLGHTDALIYGTAYITISMPDPEVDFDVDPEV-PLIRVE 150 (488) T ss_pred ceeccCCcccccccccchhHHHHHHHHHH-hc---ChhHHHHHHHHHHhhcCceEEEEecCCcccccCCCCCc-ceEEEe Confidence 44442111100 00111112233322 12 345666778889999999998875532 222 246677 Q ss_pred CCcceEEEeccCcceEEEEee--ccCCCC---------------------------ceeEEEeeeeeEEeecCCCCcccc Q lcl|Aclame:pro 135 HPSRVAIKRNSRTGRYEYYFQ--AGAGVG---------------------------TQLVSFADDEVVPIRFFNPDGLER 185 (518) Q Consensus 135 ~p~~v~~~~~~~~~~~~~~~~--~~~~~~---------------------------~~~~~~~~~~vih~~~~~~~~~~~ 185 (518) +|..+.+.++...+...+.+. .....+ .....+..-.|++|++....+..+ T Consensus 151 ~p~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~h~~g~vPvv~f~n~~~~~~~~ 230 (488) T protein:vir:23 151 PPTALYAEVDPRTRKVLYAIRAIYGADGNEIVSATLYLPDTTMTWLRAEGEWEAPTSTPHGLEMVPVIPISNRTRLSDLY 230 (488) T ss_pred ccceeEEEEecCCCceEEEEEEEEecCCCcEEEEEEEecCcEEEEEecCCceEeccccccCCCCcceEEeccccccCCcC Confidence 888887777643322221111 000000 001112223367776554445567 Q ss_pred cchHHHH-HHHHHHHHHHHHHHHHHHHHccCCcceeeeeCCcCCHHHH--HHHHHHHHHHhcCccccccceeccCCc--c Q lcl|Aclame:pro 186 GLSLMES-LKSTIFSEDSSRNATAAMWKNAGRPNLVLRHEKRLSPEAQ--QRLREQFDRAHAGSSNTGKTMVVEEGM--E 260 (518) Q Consensus 186 G~s~~~~-~~~~i~~~~~~~~~~~~~~~ng~~p~gil~~~~~~~~e~~--~~~~~~~~~~~~g~~n~g~~~vl~~g~--~ 260 (518) |.|-+.. +...++.......-......-.+.|..++.- ....+... ..-...|+.. .+++..+++|. + T Consensus 231 G~s~i~~~v~~l~Da~~~~~s~~~~~~~~~a~p~~~i~G-~~~~~~~~~~~~~~~~~~~~------~~~v~~~~~g~~~~ 303 (488) T protein:vir:23 231 GTSEISPELRSVTDAAAQILMNMQGTANLMAIPQRLIFG-AKPEELGINAETGQRMFDAY------MARILAFEGGEGAH 303 (488) T ss_pred CccchhhhHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhC-CCcccccccccccchhhhhh------hhhhccCCCCCCce Confidence 8886653 2233333332222222222323334333321 01111000 0001112211 23456666664 4 Q ss_pred cccccCChhhHHHHHHHHHHHHHHHHHhccchHhhccccccccccHHHHHHHHHHHHHHHHHHHHHHH----HHhh---- Q lcl|Aclame:pro 261 PIPLQLTAVEMQFIEARQLNREEVCGVYDIAPPIVHILDRATFSNISAQMRAFYRDTMAIPIARIQSA----MDKY---- 332 (518) Q Consensus 261 ~~~~~~~~~d~q~~e~~~~~~~~Ia~~fgVpp~~lg~~~~~~~s~~e~~~~~~~~~~l~P~~~~ie~~----ln~~---- 332 (518) +..+..++. -.+++.++..+..|+..-++|++.+|.... +.++.++. .+....|.--+...+.. |.+. T Consensus 304 ~~q~~~~~~-~~~~~~l~~~i~~~~~~~~~p~~~~g~~~~-n~~Sg~Al--~~~~~~l~~k~~~~~~~f~~~l~~~~~l~ 379 (488) T protein:vir:23 304 AEQFSAAEL-RNFVDALDALDRKAASYSGLPPQYLSSSSD-NPASAEAI--KAAESRLVKKVERKNKIFGGAWEQAMRLA 379 (488) T ss_pred eEecCCCCh-HHHHHHHHHHHHHHhcccCCCHHHhccccC-cchHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHH Confidence 544443222 237777888888999999999999876432 21222221 11111222122222221 1111 Q ss_pred --hcchh---hccceeeechhhhhccCHHHHHHHHHHHHhCC--CcCHHHHHHHHhCCCCCCccCceeeecccccccccc Q lcl|Aclame:pro 333 --VGQYW---VRKNRMKFDIDDVIQPDWEAKSESTQKMVNSG--VATPNEGREIMGLPRSDDPKADELYANSALQPLGAT 405 (518) Q Consensus 333 --l~~~~---~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g--~~T~NE~R~~~g~~pi~~~~gD~~~~~~n~~~~~~~ 405 (518) +.... .....+++.+......+..+.++.+.+++.+| +++..-+++.+|+-+-+....+...-.......... T Consensus 380 ~~~~~~~~~~~~~~~i~v~f~~~~~~s~~~~ada~~kl~~~g~~~~s~et~~~~l~~~~d~~~~~~~~~~~~~~~~~~~~ 459 (488) T protein:vir:23 380 YKMVKGGDIPTEYYRMETVWRDPSTPTYAAKADAAAKLFANGAGLIPRERGWVDMGYTIVEREQMRQWLEQDQKQGLGLI 459 (488) T ss_pred HHHhcCCCcchhhccceEEecCCCCCCHHHHHHHHHHHHhcccccCCHHHHHHhCCCCchHHHHHHHHHHHHHHHHHHHH Confidence 00100 11123455555666778888999999998866 788888889988744321111110000000000000 Q ss_pred cccCCCCCCCCCCCCcccCCCCC-ccCCcccc Q lcl|Aclame:pro 406 PDGAVEGEEAPAPKRPASTPVAS-LDQSPPAS 436 (518) Q Consensus 406 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 436 (518) +........ ..+++.++.++ .++.+.++ T Consensus 460 -~~~~~~~~~--~~~~~~~~~~~~~~~e~~~a 488 (488) T protein:vir:23 460 -GSLYGASTP--EGKPGEAPVGEPPAPEPDAA 488 (488) T ss_pred -HHHhccCCC--cccCCCCCCCCCCCCCCCCC Confidence 000000000 00111111111 11111111 No 151 >protein:vir:2427 Length: 485 # NCBI annotation: gp14 # Family: family:all:524 # MgeID: mge:52 # MgeName: D29 # Cross-refs: genbank:acc:NP_046829;genbank:gi:9630397;genbank:GeneID:1261620 Probab=98.99 E-value=9.7e-10 Score=70.00 Aligned_cols=404 Identities=15% Similarity=0.126 Sum_probs=170.7 Q ss_pred CC---CCCCCCCccccccccchhhhhhhccCcc---CCcccCccchhhHHHHhhhHHHHHHHHHHHHhhccCceEEEEec Q lcl|Aclame:pro 1 ML---LANGQTLSAPAMAELSPQMQDSYYYAPA---VGMQLERQFSLYGGIYKNQPWVRTVIAKRAQALARLPVKCMFTS 74 (518) Q Consensus 1 ~~---f~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~v~~~v~~ia~~ia~lp~~v~~~~ 74 (518) +. +-+......+.. ..+...+.+... .+..+.. ..+.......+...+|+..+..+...+|.+ . T Consensus 16 ~~~~~L~~~~~~~~~r~----~~~~~YY~G~~~i~~~~~~~~~---~~~~~~~~~n~~~~ivd~~~~~l~~~g~~~---~ 85 (485) T protein:vir:24 16 IARDEMVSAFEDQNQNL----RSNTSYYEAERRPEAIGVTVPV---QMQSLLAHVGYPRLYVDSIAERQAVEGFRL---G 85 (485) T ss_pred HHHHHHHHHHHHHHHHH----HHHHHHHhccCchhhcCcccch---hhhhhhhccchHHHHHHHHhhhhccCceec---C Confidence 00 001110000000 001111111110 1111111 111122223466667777776665555542 1 Q ss_pred CCceeeecchHHHHHhhccCccCCHHHHHHHHHHHHHHcCCeeEEeeeCCCCce-------eeeeeeCCcceEEEeccCc Q lcl|Aclame:pro 75 GDTETEEHDTGYAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQKNKSGTP-------EKLMPMHPSRVAIKRNSRT 147 (518) Q Consensus 75 ~~~~~~~~~~~~~~l~~~PN~~~t~~~f~~~~~~~~ll~G~~~~~i~~~~~G~~-------~~l~~l~p~~v~~~~~~~~ 147 (518) ++ ...+..+..++.. | ........+..+++.+|.+|+.+.++.++.. ..+.+++|..+.+.++... T Consensus 86 ~~---~~~~~~l~~i~~~-N---~~d~~~~~~~~~a~i~G~ay~~v~~~~~~~~~~~~~~~~~i~~~~p~~~~~i~D~~~ 158 (485) T protein:vir:24 86 DA---DEADEELWQWWQA-N---NLDIEAPLGYTDAYVHGRSYITISRPDPQIDLGWDPNVPLIRVEPPTRMYAEIDPRI 158 (485) T ss_pred CC---chhHHHHHHHHHh-c---ChhHHHHHHHHHHhhcCceEEEEecCCcccccccCCCcceEEEeccceeEEEeeCCc Confidence 11 1112223444432 2 3346678889999999999999877765432 2477888888888776543 Q ss_pred ceEEEE--eeccCCC--------------------C-------ceeEEEeeeeeEEeecCCCCcccccchHHHH-HHHHH Q lcl|Aclame:pro 148 GRYEYY--FQAGAGV--------------------G-------TQLVSFADDEVVPIRFFNPDGLERGLSLMES-LKSTI 197 (518) Q Consensus 148 ~~~~~~--~~~~~~~--------------------~-------~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~-~~~~i 197 (518) +...+. +...... + .....+..-.|+||++....+..+|.|.+.. +...+ T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~h~~g~vPvv~f~n~~~~~~~~G~s~i~~~v~~li 238 (485) T protein:vir:24 159 GRPAKAIRVAYDAEGNEIQAATLYTPNETFGWFRAEGEWVEWFSDPHGLGAVPVVPLPNRTRLSDLYGTSEITPELRSMT 238 (485) T ss_pred CceeEEEEEEEeecCCeEEEEEEEcCCcEEEEEecCCceEeecccccCCCcccEEEeccCcccCCcCCcccchhhHHHHH Confidence 222111 1000000 0 0111122334677765554455678887653 33444 Q ss_pred HHHHHHHHHHHHHHHccCCcceeeeeCCcCCHHHHH----HHHHHHHHHhcCccccccceecc-CCcccccccCChhhHH Q lcl|Aclame:pro 198 FSEDSSRNATAAMWKNAGRPNLVLRHEKRLSPEAQQ----RLREQFDRAHAGSSNTGKTMVVE-EGMEPIPLQLTAVEMQ 272 (518) Q Consensus 198 ~~~~~~~~~~~~~~~ng~~p~gil~~~~~~~~e~~~----~~~~~~~~~~~g~~n~g~~~vl~-~g~~~~~~~~~~~d~q 272 (518) +....+..-........+.|..++.- .+.++.. .-...|+. ..+.+..++ ++.++..+.....+ . T Consensus 239 Da~~~~~s~~~~~~~~~a~p~~~i~G---~~~~~~~~~~~~~~~~~~~------~~~~i~~~~~~~~~~~q~~~~~~e-~ 308 (485) T protein:vir:24 239 DAAARILMLMQATAELMGVPQRLIFG---IKPEEIGVDPETGQTLFDA------YLARILAFEDAEGKIQQFSAAELA-N 308 (485) T ss_pred HHHHHHHHHHHHHHHhhcchhhhhcc---CCccccccccccccchhhh------cccceeccCCCCceEEeecccchH-H Confidence 44433333333344444555544431 1111110 00111221 123445554 45666555443322 3 Q ss_pred HHHHHHHHHHHHHHHhccchHhhccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHhh----------hcch---hhc Q lcl|Aclame:pro 273 FIEARQLNREEVCGVYDIAPPIVHILDRATFSNISAQMRAFYRDTMAIPIARIQSAMDKY----------VGQY---WVR 339 (518) Q Consensus 273 ~~e~~~~~~~~Ia~~fgVpp~~lg~~~~~~~s~~e~~~~~~~~~~l~P~~~~ie~~ln~~----------l~~~---~~~ 339 (518) +++.++..+..++..=++|+..+|.... +.++.++ ..+....|.-.+...+..+... +... ... T Consensus 309 ~~~~l~~~i~~~s~~~~~p~~~fg~~~~-n~~Sg~A--l~~~~~~l~~ka~~~~~~f~~~l~~~~~l~~~~~~~~~~~~d 385 (485) T protein:vir:24 309 FTNALDQIAKQVAAYTGLPPQYLSTAAD-NPASAEA--IRAAESRLIKKVERKNAIFGGAWEEAMRLAYRLMKGGDVPPD 385 (485) T ss_pred HHHHHHHHHHHHhcccCCCHHHhccccC-cchHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccc Confidence 6777777788888888999999975432 1111111 1122222222222222211111 1100 011 Q ss_pred cceeeechhhhhccCHHHHHHHHHHHHhCC--CcCHHHHHHHHhCCCCCCccCceeeec---ccccccccccccCCCCCC Q lcl|Aclame:pro 340 KNRMKFDIDDVIQPDWEAKSESTQKMVNSG--VATPNEGREIMGLPRSDDPKADELYAN---SALQPLGATPDGAVEGEE 414 (518) Q Consensus 340 ~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g--~~T~NE~R~~~g~~pi~~~~gD~~~~~---~n~~~~~~~~~~~~~~~~ 414 (518) ...+++.+......+..+.++.+.+++.+| +++..-+++.+|+.+-+-.......-- .....++......... T Consensus 386 ~~~i~v~f~~~~~~s~~~~ad~~~kl~~~g~~~~s~et~~~~l~~~~d~~~e~~~~~ee~~~~~~~~~~~~~~~~~~~-- 463 (485) T protein:vir:24 386 MLRMETVWRDPSTPTYAAKADAATKLYGNGQGVIPRERARKDMGYSIAEREEMRRWDEEEAAMGLGLLGTMVDADPTV-- 463 (485) T ss_pred cceeeEEecCCCCCCHHHHHHHHHHHHhcccccCCHHHHHhhCCCCHhHHHHHHHHHHHHhhhhhhHHHhhcccCCCC-- Confidence 234555666666778888999999998865 677777888887754321111100000 0000011111110000 Q ss_pred CCCCCCcccCCCCCccCCccccccccCh Q lcl|Aclame:pro 415 APAPKRPASTPVASLDQSPPASVPGLSP 442 (518) Q Consensus 415 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 442 (518) ++++..+. ..++.++..+.+.+ T Consensus 464 ---~~~~~~~e---~~~~~~~~~~~~~a 485 (485) T protein:vir:24 464 ---PGSPNPTP---APKPQPAIEGGDSA 485 (485) T ss_pred ---CCCCCCCC---CCCCccCCCCCCCC Confidence 00110010 00000111111111 No 152 >protein:vir:97900 Length: 639 # NCBI annotation: gp8 # Family: family:all:2798 # MgeID: mge:1482 # MgeName: Orion # Cross-refs: genbank:acc:YP_655104;genbank:gi:109391854;genbank:GeneID:4157263 Probab=98.97 E-value=5.9e-10 Score=71.17 Aligned_cols=502 Identities=14% Similarity=0.092 Sum_probs=227.0 Q ss_pred CCCCC-CCCCccccccccchhhhhhhccCccCCccc----CccchhhH---HHHhhhHHHHHHHHHHHHhhccCceEEEE Q lcl|Aclame:pro 1 MLLAN-GQTLSAPAMAELSPQMQDSYYYAPAVGMQL----ERQFSLYG---GIYKNQPWVRTVIAKRAQALARLPVKCMF 72 (518) Q Consensus 1 ~~f~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~---~~~~~~~~v~~~v~~ia~~ia~lp~~v~~ 72 (518) .+-.| |.+++++.+..+.-. ..... .+...... +....+-. +.|...+-++-.|.-|++.++++.+..-+ T Consensus 7 r~~rrpk~~p~~~rr~~ltaA-sq~~~-~p~~~~kt~~~~~ar~~WQ~eAW~~~d~v~Elry~vgW~~~s~sr~rL~as~ 84 (639) T protein:vir:97 7 RVVRRPKGSAPAARRRSLTAA-SQLIT-DPQKQMKTSLMGTARNEWQSEAWDFSESIGELSYYVSWRANSCSRTTLIPSA 84 (639) T ss_pred eeeecCCCCCcchhhHHHhhh-hhccC-CcccchhhhccccchhhhhhhhhhhhhhhhhHHHHhhhhhhhhceeeeEeee Confidence 12222 333333222221111 00000 00000000 00011111 34445588889999999999999998887 Q ss_pred ecCCce-----ee-ecch---H-HHHHhhccCccCCHHHHHHHHHHHHHHcCCeeEEeee-CCCCc------ee-eeeee Q lcl|Aclame:pro 73 TSGDTE-----TE-EHDT---G-YAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQK-NKSGT------PE-KLMPM 134 (518) Q Consensus 73 ~~~~~~-----~~-~~~~---~-~~~l~~~PN~~~t~~~f~~~~~~~~ll~G~~~~~i~~-~~~G~------~~-~l~~l 134 (518) .+.+.. +. .+++ . ......=-...+...++++.++.++-+-|++|+.++. ..++. +. +++.+ T Consensus 85 idpDtg~PtG~V~~E~d~~~~~v~~~v~~iagG~lGqa~llkr~~~~ltV~GE~wi~~l~r~~k~~~~~~~~~~~~W~vv 164 (639) T protein:vir:97 85 IDPDTGLPTGEVDIEEDPDAQTVADYVKGIADGPLGQAALIKRAVECMTVVGEVWIAVLIRQEKDPVTGLAAPRARWYAV 164 (639) T ss_pred eccccCCCCCccccccccCcchHHHHHHhhcCccchHHHHHHHHHhheecccceEEEEEEecCccccCcccccccceeee Confidence 764432 21 1222 1 1222222344577789999999999999999977654 23332 12 33444 Q ss_pred CCcceEEEeccCcceEEEEeeccCCCCceeEEEeeeeeEEeec--CCCCcccccchHHHHHHHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 135 HPSRVAIKRNSRTGRYEYYFQAGAGVGTQLVSFADDEVVPIRF--FNPDGLERGLSLMESLKSTIFSEDSSRNATAAMWK 212 (518) Q Consensus 135 ~p~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vih~~~--~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ 212 (518) ...-|.. ..++....... . |...+|....-+-||. ++|..-.+--||+.++...+.......+...+..+ T Consensus 165 s~~Ei~~---~~~~~~~i~lP----d-G~~he~~~~~d~l~RvW~P~prr~~e~dSpvra~l~~l~Ei~~~t~~i~aaak 236 (639) T protein:vir:97 165 TREEIKS---KAGETAEISLP----D-GKTHEFNRDLDSLVRIWNPRPRKASQATSPVRACLETLREIERTTRKIKNAAK 236 (639) T ss_pred eHHHhcc---cCCCeeEeecC----C-CCCccccCCCceEEEEeCCCcccccCCcchhHHHHHHHHHHHHhhhHHHHHHH Confidence 4444431 22222222221 1 1222333322223443 34444456789999999999999988888888888 Q ss_pred ccCCcceeeeeCCcCCH-------------------------HHHHHHHHHHHH----HhcC--ccccccceeccC---- Q lcl|Aclame:pro 213 NAGRPNLVLRHEKRLSP-------------------------EAQQRLREQFDR----AHAG--SSNTGKTMVVEE---- 257 (518) Q Consensus 213 ng~~p~gil~~~~~~~~-------------------------e~~~~~~~~~~~----~~~g--~~n~g~~~vl~~---- 257 (518) .-.+-.|||.+|..++- -..+.|.+.|.+ .+.. +..+--++|+.. T Consensus 237 SRl~gnGvlfvP~els~p~~~~p~~~~~~~~pg~~v~~~~~~~a~d~l~~~l~qaa~tai~De~S~aA~vPiia~~p~E~ 316 (639) T protein:vir:97 237 SRVMNNGVLFVPAEMSLPAAQAPIPAGQAQIPGAPVPEVSGVPASEQLATMIYQASVAAMEDENSQAAYIPLVASVAAEH 316 (639) T ss_pred HHHhhCceeeeccccCCCCccccccccccccCcccccccCCccchHHHHHHHHHHHHhhhcCCCCccceeeeeEeechHH Confidence 88888888877654321 112333333333 2321 122333334332 Q ss_pred CcccccccCCh-hhHHHHHHHHHHHHHHHHHhccchHh-hccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc Q lcl|Aclame:pro 258 GMEPIPLQLTA-VEMQFIEARQLNREEVCGVYDIAPPI-VHILDRATFSNISAQMRAFYRDTMAIPIARIQSAMDKYVGQ 335 (518) Q Consensus 258 g~~~~~~~~~~-~d~q~~e~~~~~~~~Ia~~fgVpp~~-lg~~~~~~~s~~e~~~~~~~~~~l~P~~~~ie~~ln~~l~~ 335 (518) ..+++.+.+.. -+.--+.+|+-.+..||..+.|||+. +|+ +++|.=+.-+....-++..|.|++..|+++|++.++. T Consensus 317 l~~ikhl~f~~ei~e~aiktR~daI~RlA~glDi~pE~LLGl-~d~NHWsAWqI~dedvrlHI~P~l~~icdAlT~~~Lr 395 (639) T protein:vir:97 317 LEKVQHIKFGNEVTEVEIKTRIDAITRLAMGLDVSPERLLGM-SKGNHWSAWAIGDEDVQLHIKPVMDLICQAIYNDILT 395 (639) T ss_pred hcCeeeeeecCchhHHHHhhHHHHHHHHHhccCCchhheeec-ccccceEEEEecccceeeecchhHHHHHHHHHhhHHH Confidence 12344444433 23345778999999999999999966 455 4444433344455566778999999999999987654 Q ss_pred hh-------hccceeeechhhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHHhCCCCCCccCc-----------eeeecc Q lcl|Aclame:pro 336 YW-------VRKNRMKFDIDDVIQPDWEAKSESTQKMVNSGVATPNEGREIMGLPRSDDPKAD-----------ELYANS 397 (518) Q Consensus 336 ~~-------~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~T~NE~R~~~g~~pi~~~~gD-----------~~~~~~ 397 (518) .. -..|-++||.+.|. .|+. +.+....+.+.|.||-.=.|+.+|+.--+...-+ .+-.+. T Consensus 396 p~Le~eGvDp~kYvvW~DaS~Lt-~dPd-~~deA~qa~drGAIt~eAlR~~lG~~edd~yd~~t~e~~~~~A~~~V~~~P 473 (639) T protein:vir:97 396 PLLAREGIDPTKYILWYDASGLT-SDPD-LSDEAVEAHDRGAITSAALRRLLNVGEDSGYDLTTLDGCREFAADVVTKNP 473 (639) T ss_pred HHHHHhCCCHHHhEeeecCcccc-cCCC-CcHHHHHHHHcCCccHHHHHHHhccccccCCCCCCcHHHHHHHHHHhcCCc Confidence 21 13477899998873 3333 3334445788999999999999999654211100 010011 Q ss_pred c----ccccccccccCCCCCCCCCCCCcccCCCCCccCCccccccccChhhhcchhHH--------HHHHHHHHh-hccC Q lcl|Aclame:pro 398 A----LQPLGATPDGAVEGEEAPAPKRPASTPVASLDQSPPASVPGLSPTNSDRSTDS--------GKTEPRRLM-QKPP 464 (518) Q Consensus 398 n----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~-~k~~ 464 (518) . +.|+.....+.....+.+....+++....+ +++..++.......+..+..+. .....++++ -++ T Consensus 474 ~li~~~apl~~P~lq~~e~ptp~~a~~~a~~~~~~-de~~ga~~~~ePdte~~~~~~~a~~~~~~a~~v~a~~llv~RA- 551 (639) T protein:vir:97 474 ELIAMYAPLLSSQLAGIEFPQPANAIESTREDEED-DEDSGARQQREPQTEDERSTEEAASLNDRAAYLVAERLLVNRA- 551 (639) T ss_pred chhhhhhhccCccceecccCCCCCCCCCCCCCCCc-ccccCCCCCcCCCcccccCCccccCcCchhHHHHHHHHHHHHH- Confidence 1 122221111111111111111111111111 1111111111111111111100 000000000 000 Q ss_pred cchhHHHH--HHHHHHHhhhhhhhccccc--chhhhhhhHHHHHHHHHHHHhhhc------ccC Q lcl|Aclame:pro 465 PKESSPKH--LRAVKGAMGRGKDIKGFAL--QLAEKYPDDLEDILLAVQLALAER------KDN 518 (518) Q Consensus 465 ~~~~~~~~--~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~------~~~ 518 (518) -+.+.|. ...-.+..++.+++-+-.. ..+-..++.+-.+.--|--+|.+. .|+ T Consensus 552 -LelAGkRr~~~~~r~~~a~~r~vp~he~H~~l~Pv~~~~~~rli~gwd~~ld~~~~a~lg~D~ 614 (639) T protein:vir:97 552 -LDLAGKRRFKVNDAALKTKLRDVPAHEYHRVLPPVRSSEIPRLIAGWDTALEDEVVASLGLDN 614 (639) T ss_pred -HHhhcccccCCCChhhHHHhhcCChhHceeecCCCChHHHHHHHHHHHhHHHHHHHHHhCCCH Confidence 0000000 0000111111111111000 000000111111101122222111 122 No 153 >protein:vir:107517 Length: 639 # NCBI annotation: gp8 # Family: family:all:2798 # MgeID: mge:1481 # MgeName: PG1 # Cross-refs: genbank:acc:NP_943786;genbank:gi:38638411;genbank:GeneID:2657197 Probab=98.97 E-value=5.9e-10 Score=71.17 Aligned_cols=502 Identities=14% Similarity=0.092 Sum_probs=227.0 Q ss_pred CCCCC-CCCCccccccccchhhhhhhccCccCCccc----CccchhhH---HHHhhhHHHHHHHHHHHHhhccCceEEEE Q lcl|Aclame:pro 1 MLLAN-GQTLSAPAMAELSPQMQDSYYYAPAVGMQL----ERQFSLYG---GIYKNQPWVRTVIAKRAQALARLPVKCMF 72 (518) Q Consensus 1 ~~f~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~---~~~~~~~~v~~~v~~ia~~ia~lp~~v~~ 72 (518) .+-.| |.+++++.+..+.-. ..... .+...... +....+-. +.|...+-++-.|.-|++.++++.+..-+ T Consensus 7 r~~rrpk~~p~~~rr~~ltaA-sq~~~-~p~~~~kt~~~~~ar~~WQ~eAW~~~d~v~Elry~vgW~~~s~sr~rL~as~ 84 (639) T protein:vir:10 7 RVVRRPKGSAPAARRRSLTAA-SQLIT-DPQKQMKTSLMGTARNEWQSEAWDFSESIGELSYYVSWRANSCSRTTLIPSA 84 (639) T ss_pred eeeecCCCCCcchhhHHHhhh-hhccC-CcccchhhhccccchhhhhhhhhhhhhhhhhHHHHhhhhhhhhceeeeEeee Confidence 12222 333333222221111 00000 00000000 00011111 34445588889999999999999998887 Q ss_pred ecCCce-----ee-ecch---H-HHHHhhccCccCCHHHHHHHHHHHHHHcCCeeEEeee-CCCCc------ee-eeeee Q lcl|Aclame:pro 73 TSGDTE-----TE-EHDT---G-YAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQK-NKSGT------PE-KLMPM 134 (518) Q Consensus 73 ~~~~~~-----~~-~~~~---~-~~~l~~~PN~~~t~~~f~~~~~~~~ll~G~~~~~i~~-~~~G~------~~-~l~~l 134 (518) .+.+.. +. .+++ . ......=-...+...++++.++.++-+-|++|+.++. ..++. +. +++.+ T Consensus 85 idpDtg~PtG~V~~E~d~~~~~v~~~v~~iagG~lGqa~llkr~~~~ltV~GE~wi~~l~r~~k~~~~~~~~~~~~W~vv 164 (639) T protein:vir:10 85 IDPDTGLPTGEVDIEEDPDAQTVADYVKGIADGPLGQAALIKRAVECMTVVGEVWIAVLIRQEKDPVTGLAAPRARWYAV 164 (639) T ss_pred eccccCCCCCccccccccCcchHHHHHHhhcCccchHHHHHHHHHhheecccceEEEEEEecCccccCcccccccceeee Confidence 764432 21 1222 1 1222222344577789999999999999999977654 23332 12 33444 Q ss_pred CCcceEEEeccCcceEEEEeeccCCCCceeEEEeeeeeEEeec--CCCCcccccchHHHHHHHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 135 HPSRVAIKRNSRTGRYEYYFQAGAGVGTQLVSFADDEVVPIRF--FNPDGLERGLSLMESLKSTIFSEDSSRNATAAMWK 212 (518) Q Consensus 135 ~p~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vih~~~--~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ 212 (518) ...-|.. ..++....... . |...+|....-+-||. ++|..-.+--||+.++...+.......+...+..+ T Consensus 165 s~~Ei~~---~~~~~~~i~lP----d-G~~he~~~~~d~l~RvW~P~prr~~e~dSpvra~l~~l~Ei~~~t~~i~aaak 236 (639) T protein:vir:10 165 TREEIKS---KAGETAEISLP----D-GKTHEFNRDLDSLVRIWNPRPRKASQATSPVRACLETLREIERTTRKIKNAAK 236 (639) T ss_pred eHHHhcc---cCCCeeEeecC----C-CCCccccCCCceEEEEeCCCcccccCCcchhHHHHHHHHHHHHhhhHHHHHHH Confidence 4444431 22222222221 1 1222333322223443 34444456789999999999999988888888888 Q ss_pred ccCCcceeeeeCCcCCH-------------------------HHHHHHHHHHHH----HhcC--ccccccceeccC---- Q lcl|Aclame:pro 213 NAGRPNLVLRHEKRLSP-------------------------EAQQRLREQFDR----AHAG--SSNTGKTMVVEE---- 257 (518) Q Consensus 213 ng~~p~gil~~~~~~~~-------------------------e~~~~~~~~~~~----~~~g--~~n~g~~~vl~~---- 257 (518) .-.+-.|||.+|..++- -..+.|.+.|.+ .+.. +..+--++|+.. T Consensus 237 SRl~gnGvlfvP~els~p~~~~p~~~~~~~~pg~~v~~~~~~~a~d~l~~~l~qaa~tai~De~S~aA~vPiia~~p~E~ 316 (639) T protein:vir:10 237 SRVMNNGVLFVPAEMSLPAAQAPIPAGQAQIPGAPVPEVSGVPASEQLATMIYQASVAAMEDENSQAAYIPLVASVAAEH 316 (639) T ss_pred HHHhhCceeeeccccCCCCccccccccccccCcccccccCCccchHHHHHHHHHHHHhhhcCCCCccceeeeeEeechHH Confidence 88888888877654321 112333333333 2321 122333334332 Q ss_pred CcccccccCCh-hhHHHHHHHHHHHHHHHHHhccchHh-hccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc Q lcl|Aclame:pro 258 GMEPIPLQLTA-VEMQFIEARQLNREEVCGVYDIAPPI-VHILDRATFSNISAQMRAFYRDTMAIPIARIQSAMDKYVGQ 335 (518) Q Consensus 258 g~~~~~~~~~~-~d~q~~e~~~~~~~~Ia~~fgVpp~~-lg~~~~~~~s~~e~~~~~~~~~~l~P~~~~ie~~ln~~l~~ 335 (518) ..+++.+.+.. -+.--+.+|+-.+..||..+.|||+. +|+ +++|.=+.-+....-++..|.|++..|+++|++.++. T Consensus 317 l~~ikhl~f~~ei~e~aiktR~daI~RlA~glDi~pE~LLGl-~d~NHWsAWqI~dedvrlHI~P~l~~icdAlT~~~Lr 395 (639) T protein:vir:10 317 LEKVQHIKFGNEVTEVEIKTRIDAITRLAMGLDVSPERLLGM-SKGNHWSAWAIGDEDVQLHIKPVMDLICQAIYNDILT 395 (639) T ss_pred hcCeeeeeecCchhHHHHhhHHHHHHHHHhccCCchhheeec-ccccceEEEEecccceeeecchhHHHHHHHHHhhHHH Confidence 12344444433 23345778999999999999999966 455 4444433344455566778999999999999987654 Q ss_pred hh-------hccceeeechhhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHHhCCCCCCccCc-----------eeeecc Q lcl|Aclame:pro 336 YW-------VRKNRMKFDIDDVIQPDWEAKSESTQKMVNSGVATPNEGREIMGLPRSDDPKAD-----------ELYANS 397 (518) Q Consensus 336 ~~-------~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~T~NE~R~~~g~~pi~~~~gD-----------~~~~~~ 397 (518) .. -..|-++||.+.|. .|+. +.+....+.+.|.||-.=.|+.+|+.--+...-+ .+-.+. T Consensus 396 p~Le~eGvDp~kYvvW~DaS~Lt-~dPd-~~deA~qa~drGAIt~eAlR~~lG~~edd~yd~~t~e~~~~~A~~~V~~~P 473 (639) T protein:vir:10 396 PLLAREGIDPTKYILWYDASGLT-SDPD-LSDEAVEAHDRGAITSAALRRLLNVGEDSGYDLTTLDGCREFAADVVTKNP 473 (639) T ss_pred HHHHHhCCCHHHhEeeecCcccc-cCCC-CcHHHHHHHHcCCccHHHHHHHhccccccCCCCCCcHHHHHHHHHHhcCCc Confidence 21 13477899998873 3333 3334445788999999999999999654211100 010011 Q ss_pred c----ccccccccccCCCCCCCCCCCCcccCCCCCccCCccccccccChhhhcchhHH--------HHHHHHHHh-hccC Q lcl|Aclame:pro 398 A----LQPLGATPDGAVEGEEAPAPKRPASTPVASLDQSPPASVPGLSPTNSDRSTDS--------GKTEPRRLM-QKPP 464 (518) Q Consensus 398 n----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~-~k~~ 464 (518) . +.|+.....+.....+.+....+++....+ +++..++.......+..+..+. .....++++ -++ T Consensus 474 ~li~~~apl~~P~lq~~e~ptp~~a~~~a~~~~~~-de~~ga~~~~ePdte~~~~~~~a~~~~~~a~~v~a~~llv~RA- 551 (639) T protein:vir:10 474 ELIAMYAPLLSSQLAGIEFPQPANAIESTREDEED-DEDSGARQQREPQTEDERSTEEAASLNDRAAYLVAERLLVNRA- 551 (639) T ss_pred chhhhhhhccCccceecccCCCCCCCCCCCCCCCc-ccccCCCCCcCCCcccccCCccccCcCchhHHHHHHHHHHHHH- Confidence 1 122221111111111111111111111111 1111111111111111111100 000000000 000 Q ss_pred cchhHHHH--HHHHHHHhhhhhhhccccc--chhhhhhhHHHHHHHHHHHHhhhc------ccC Q lcl|Aclame:pro 465 PKESSPKH--LRAVKGAMGRGKDIKGFAL--QLAEKYPDDLEDILLAVQLALAER------KDN 518 (518) Q Consensus 465 ~~~~~~~~--~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~------~~~ 518 (518) -+.+.|. ...-.+..++.+++-+-.. ..+-..++.+-.+.--|--+|.+. .|+ T Consensus 552 -LelAGkRr~~~~~r~~~a~~r~vp~he~H~~l~Pv~~~~~~rli~gwd~~ld~~~~a~lg~D~ 614 (639) T protein:vir:10 552 -LDLAGKRRFKVNDAALKTKLRDVPAHEYHRVLPPVRSSEIPRLIAGWDTALEDEVVASLGLDN 614 (639) T ss_pred -HHhhcccccCCCChhhHHHhhcCChhHceeecCCCChHHHHHHHHHHHhHHHHHHHHHhCCCH Confidence 0000000 0000111111111111000 000000111111101122222111 122 No 154 >protein:vir:4898 Length: 502 # NCBI annotation: gp502 # Family: family:all:125 # MgeID: mge:107 # MgeName: Sfi11 # Cross-refs: genbank:acc:NP_056676;genbank:gi:9635011;genbank:GeneID:1262662 Probab=98.95 E-value=1e-08 Score=64.35 Aligned_cols=415 Identities=10% Similarity=0.065 Sum_probs=180.2 Q ss_pred CCCC----------CCC-CCccccccccchhhhhhhccCc-cC---CcccCccchhhHHHHhhhHHHHHHHHHHHHhhcc Q lcl|Aclame:pro 1 MLLA----------NGQ-TLSAPAMAELSPQMQDSYYYAP-AV---GMQLERQFSLYGGIYKNQPWVRTVIAKRAQALAR 65 (518) Q Consensus 1 ~~f~----------~~~-~~~~~~~~~~~~~~~~~~~~~~-~~---~~~~~~~~~~~~~~~~~~~~v~~~v~~ia~~ia~ 65 (518) -++. ... ....+.. .-+...+.+.. .. ......... ..-...++....|+..+.-+.+ T Consensus 36 ~~~~~~~~~i~~~i~~h~~~~~~rl----~~l~~yY~g~~~~i~~~~~~~~~~~~---~~ki~~n~~k~Ivd~~~~yl~g 108 (502) T protein:vir:48 36 ELMVNNWELLKNFINHHKLRQAPRI----QELLDYARGENHDVLKSGRRKDNEMA---DKRAVHNYGRMISKFKTGYLAG 108 (502) T ss_pred hhccccHHHHHHHHHHHHHHHHHHH----HHHHHHhcCCCccccccccccccccc---cceeecchHHHHHHHHhhhhcc Confidence 0000 000 0000000 00111111110 00 000000000 0011245667788888888888 Q ss_pred CceEEEEecCCceeeecchHHHHHhhccCccCCHHHHHHHHHHHHHHcCCeeEEeeeCCCCceeeeeeeCCcceEEEecc Q lcl|Aclame:pro 66 LPVKCMFTSGDTETEEHDTGYAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQKNKSGTPEKLMPMHPSRVAIKRNS 145 (518) Q Consensus 66 lp~~v~~~~~~~~~~~~~~~~~~l~~~PN~~~t~~~f~~~~~~~~ll~G~~~~~i~~~~~G~~~~l~~l~p~~v~~~~~~ 145 (518) -|+.+.-.++. ....+..++.+....-........+..+++.+|.+|+.+..+.+|.+ .+..++|..+.++++. T Consensus 109 ~p~~~~~~d~~-----~~~~~~~~l~~~~~~N~~~~~~~~~~~~~~~~G~a~~~v~~dedg~~-~i~~~~p~~~~~vydd 182 (502) T protein:vir:48 109 NPIRVEYDDNE-----DNSQNDDAIKRIGRINDIDTHNRNLIRDLSQTGRAYEVIYRSEYDET-RIKRLSPLETFVIYDN 182 (502) T ss_pred cCeeEecCCcc-----chhHHHHHHHHHHhhcCHhHHHHHHHHHHhhcCeEEEEEEeCCCCce-EEEEEcccceEEEEcC Confidence 88887543221 11222222333322234566777888999999999999988888865 4677889998888764 Q ss_pred Cc-ceEEE--E-eeccCCCC-ceeE-EEeeeeeEEeecC----------CC---------CcccccchHHHHHHHHHHHH Q lcl|Aclame:pro 146 RT-GRYEY--Y-FQAGAGVG-TQLV-SFADDEVVPIRFF----------NP---------DGLERGLSLMESLKSTIFSE 200 (518) Q Consensus 146 ~~-~~~~~--~-~~~~~~~~-~~~~-~~~~~~vih~~~~----------~~---------~~~~~G~s~~~~~~~~i~~~ 200 (518) .. +...+ . |......+ ...+ .+.+..++++... ++ .+...|.|.+..+...++.. T Consensus 183 ~~~~~~~~~ir~~~~~~~~~~~~~~~iyt~~~i~~~~~~~~~~~~~~~~~~~g~vPvv~~~nn~~g~sd~e~v~~liDa~ 262 (502) T protein:vir:48 183 SLEDNSIAAVRYYNRGTLQNAKDVVEIYTNQHIYTLDASDSFNEISVTPHAFGTVPITEFLNNADGIGDYETELYLIDLY 262 (502) T ss_pred CCCCceEEEEEEEEEeecCCcEEEEEEEeCCeEEEEEeCCceeeccceecCCCccceEEecCCCCCCCchhhhHHHHHHH Confidence 32 22111 1 11111111 1111 1222222222110 00 01235888888888888888 Q ss_pred HHHHHHHHHHHHccCCcceeeeeCCcCC-HHHHHHHHHHHHHHhcCccccccceeccCCcccccccCChhhHHHHHHHHH Q lcl|Aclame:pro 201 DSSRNATAAMWKNAGRPNLVLRHEKRLS-PEAQQRLREQFDRAHAGSSNTGKTMVVEEGMEPIPLQLTAVEMQFIEARQL 279 (518) Q Consensus 201 ~~~~~~~~~~~~ng~~p~gil~~~~~~~-~e~~~~~~~~~~~~~~g~~n~g~~~vl~~g~~~~~~~~~~~d~q~~e~~~~ 279 (518) ..+..-..+.++....|-.++....... ++....++... ..+.. ..+..-...++.++..++.......+....+. T Consensus 263 d~~~S~~~~~~~~~~~~~lv~~g~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~~~ 339 (502) T protein:vir:48 263 DSAESDTANHMSDMADAILAIYGDLALPQGMQASDMKRTR-LMQLK--PPKSADGKEGTVKAEYLTKSYDVSGAEAYKTR 339 (502) T ss_pred HHHHHHHHHHHHHhcCceeeeecCcccccccchhhhhhcc-eeecc--ccccccccccCcceeEeeecCCHHHHHHHHHH Confidence 7777777777887777776665433222 12221111110 00000 00000112234454445444444455667788 Q ss_pred HHHHHHHHhccchHhhccc-cccccccHH----------HHHHHHHHHHHHHHHHHHHHHHHhhhcchhhccceeeechh Q lcl|Aclame:pro 280 NREEVCGVYDIAPPIVHIL-DRATFSNIS----------AQMRAFYRDTMAIPIARIQSAMDKYVGQYWVRKNRMKFDID 348 (518) Q Consensus 280 ~~~~Ia~~fgVpp~~lg~~-~~~~~s~~e----------~~~~~~~~~~l~P~~~~ie~~ln~~l~~~~~~~~~~~fd~~ 348 (518) ..+.|+..-++|....+.. ++.+..-.+ ......+..+++-.++.+...++..--........+++.+. T Consensus 340 L~~~I~~~s~~p~~~~~~~~~n~Sg~Alk~~~~~l~~k~~~~~~~~~~~l~~~~~li~~~~~~~~~~~~~d~~~i~i~f~ 419 (502) T protein:vir:48 340 LNKDIHVFTNTPDMSDNHFSGNASGEALKYKLFGLDQDRVDTQSQFTQGLKRRYRLAARIGSLVNEFKDFDESRLKITFT 419 (502) T ss_pred HHHHHHHHhCCCCcCccccccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccceEEeC Confidence 8899999999987554432 211111111 11113333333333333333332211111112223555666 Q ss_pred hhhccCHHHHHHHHHHHHhCCCcCHHHHHHHHhCCCCCCccCceeeecccccccccccccCCCCCCCCCCCCcccCCCCC Q lcl|Aclame:pro 349 DVIQPDWEAKSESTQKMVNSGVATPNEGREIMGLPRSDDPKADELYANSALQPLGATPDGAVEGEEAPAPKRPASTPVAS 428 (518) Q Consensus 349 ~l~~~d~~~~~~~~~~~~~~g~~T~NE~R~~~g~~pi~~~~gD~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 428 (518) ..+..|..+.++.+.++ .|+++..-+.+.+++ ++++..+ + .-+....... +....+... .+... T Consensus 420 ~~~p~d~~e~a~~~~kl--~g~iS~et~l~~l~~--v~D~~~E-~------~ri~~E~~~~---~~~~~~~~~--~~~~~ 483 (502) T protein:vir:48 420 PNLPKSLYEQVSILNDL--GGQVSQETALSLSGL--VENPTEE-L------DKINEESSKI---DFKGYPSYF--YDNVG 483 (502) T ss_pred CCCCcCHHHHHHHHHHH--hccCcHHHHHHhCCC--CCCHHHH-H------HHHHHHHHhh---hhhcccccc--ccccc Confidence 77888999999999888 478888778888754 3332111 0 0000000000 000000000 00000 Q ss_pred ccCCccccccccChhhhcchhH Q lcl|Aclame:pro 429 LDQSPPASVPGLSPTNSDRSTD 450 (518) Q Consensus 429 ~~~~~~~~~~~~~~~~~~~~~~ 450 (518) .+ .....+..+++.++..+ T Consensus 484 ~~---~d~~~e~~~~~~~~~~~ 502 (502) T protein:vir:48 484 KY---TDEVKETHTDDFERVYE 502 (502) T ss_pred cc---CCCccCCCCcCcCCCCC Confidence 00 00000011111111111 No 155 >protein:vir:4223 Length: 486 # NCBI annotation: predicted 53.7Kd protein # Family: family:all:524 # MgeID: mge:89 # MgeName: L5 # Cross-refs: genbank:acc:NP_039678;swissprot:sw:q05220;genbank:gi:9625444;uniprot:Q05220;genbank:GeneID:2942930;interpro:IPR010859 Probab=98.93 E-value=2e-09 Score=68.33 Aligned_cols=408 Identities=13% Similarity=0.085 Sum_probs=166.5 Q ss_pred CCCCCCCCccccccc--cc----------hh---hhhhhccCcc---CCcccCccchhhHHHHhhhHHHHHHHHHHHHhh Q lcl|Aclame:pro 2 LLANGQTLSAPAMAE--LS----------PQ---MQDSYYYAPA---VGMQLERQFSLYGGIYKNQPWVRTVIAKRAQAL 63 (518) Q Consensus 2 ~f~~~~~~~~~~~~~--~~----------~~---~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~v~~~v~~ia~~i 63 (518) |=.+-+....+.... +. +. +...+.+... .+..+. ...+.......+...+|+.++..+ T Consensus 1 ~~~~~~~~~e~~~~~~~~~~l~~~~~~~~~r~~~l~~YY~G~~~i~~~~~~~~---~~~~~~~~v~n~~~~iVd~~~~~l 77 (486) T protein:vir:42 1 MTAPLPGMEEIEDPAVVREEMISAFEDASKDLASNTSYYDAERRPEAIGVTVP---REMQQLLAHVGYPRLYVDSVAERQ 77 (486) T ss_pred CCCCCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcchhcccccc---hhHhhhhhccchHHHHHHHHHhhh Confidence 111111111110000 00 00 0000111100 001111 111122223456677777777666 Q ss_pred ccCceEEEEecCCceeeecchHHHHHhhccCccCCHHHHHHHHHHHHHHcCCeeEEeeeCCCCc-------eeeeeeeCC Q lcl|Aclame:pro 64 ARLPVKCMFTSGDTETEEHDTGYAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQKNKSGT-------PEKLMPMHP 136 (518) Q Consensus 64 a~lp~~v~~~~~~~~~~~~~~~~~~l~~~PN~~~t~~~f~~~~~~~~ll~G~~~~~i~~~~~G~-------~~~l~~l~p 136 (518) --.+|.+ .++ ...+..+..++.+ |. .......+..+++.+|.+|+.+.++..|. ...+.+++| T Consensus 78 ~~~g~~~---~~~---~~~~~~~~~i~~~-N~---~d~~~~~~~~~a~~~G~ay~~v~~~e~~~~~~~~~~~~~i~~~~p 147 (486) T protein:vir:42 78 AVEGFRL---GDA---DEADEELWQWWQA-NN---LDIEAPLGYTDAYVHGRSFITISKPDPQLDLGWDQNVPIIRVEPP 147 (486) T ss_pred cccceec---CCC---chhHHHHHHHHHh-cC---hhHHHHHHHHHHhhcCceEEEEecCCcccccccCCCeeEEEEecc Confidence 4444432 111 1122334444433 32 23455678889999999999887665432 235677888 Q ss_pred cceEEEeccCcceEEEEe--eccCCC--------------------C-------ceeEEEeeeeeEEeecCCCCcccccc Q lcl|Aclame:pro 137 SRVAIKRNSRTGRYEYYF--QAGAGV--------------------G-------TQLVSFADDEVVPIRFFNPDGLERGL 187 (518) Q Consensus 137 ~~v~~~~~~~~~~~~~~~--~~~~~~--------------------~-------~~~~~~~~~~vih~~~~~~~~~~~G~ 187 (518) ..+.+.++.....+.+.+ ...... . .....+..-.|++|+++...+..+|. T Consensus 148 ~~~~~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~h~~g~vPvv~~~n~~~~~~~~G~ 227 (486) T protein:vir:42 148 TRMHAEIDPRINRVSKAIRVAYDKEGNEIQAATLYTPMETIGWFRADGEWAEWFNVPHGLGVVPVVPLPNRTRLSDLYGT 227 (486) T ss_pred cceEEEEeCCCCCeEEEEEEEEecCCCeEEEEEEEcCCcEEEEEecCCcEEeecceecCCCCceEEEeccccccCCCCCc Confidence 888887764332221111 100000 0 00111222335666655444556788 Q ss_pred hHHHH-HHHHHHHHHHHHHHHHHHHHccCCcceeeeeCCcCCHHHH----HHHHHHHHHHhcCccccccceecc-CCccc Q lcl|Aclame:pro 188 SLMES-LKSTIFSEDSSRNATAAMWKNAGRPNLVLRHEKRLSPEAQ----QRLREQFDRAHAGSSNTGKTMVVE-EGMEP 261 (518) Q Consensus 188 s~~~~-~~~~i~~~~~~~~~~~~~~~ng~~p~gil~~~~~~~~e~~----~~~~~~~~~~~~g~~n~g~~~vl~-~g~~~ 261 (518) |.+.. +...++....+..-.....+-.+.|.-++.-- +.++. .+-...|.. ..+++.+++ ++.++ T Consensus 228 s~i~~~v~~liDa~~~~~s~~~~~~e~~a~p~~~i~G~---~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~ 298 (486) T protein:vir:42 228 SEITPELRSMTDAAARILMLMQATAELMGVPQRLIFGI---KPEEIGVDSETGQTLFDA------YLARILAFEDAEGKI 298 (486) T ss_pred ccchhhHHHHHHHHHHHHHHHHHHHHhhcchHHHhhcC---Cccccccccccccchhhh------hhchhcccCCCCceE Confidence 86653 22333333333223333333344454444311 11110 000111221 123455554 45566 Q ss_pred ccccCChhhHHHHHHHHHHHHHHHHHhccchHhhccccccccccHHHH-------------HHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 262 IPLQLTAVEMQFIEARQLNREEVCGVYDIAPPIVHILDRATFSNISAQ-------------MRAFYRDTMAIPIARIQSA 328 (518) Q Consensus 262 ~~~~~~~~d~q~~e~~~~~~~~Ia~~fgVpp~~lg~~~~~~~s~~e~~-------------~~~~~~~~l~P~~~~ie~~ 328 (518) ..+..... -.+++.++..+..++..=++|+..+|.... +.++.++. ....+..+|.-.++.+... T Consensus 299 ~q~~~~~~-e~~~~~l~~~i~~~s~~~~~p~~~fg~~~~-n~~Sg~Al~~~~~~l~~ka~~~~~~f~~~l~~~~~l~~~~ 376 (486) T protein:vir:42 299 QQFSAAEL-ANFTNALDQIAKQVAAYTGLPPQYLSTAAD-NPASAEAIRAAESRLIKKVERKNLMFGGAWEEAMRIAYRI 376 (486) T ss_pred EeecccCH-HHHHHHHHHHHHHHhcccCCCHHHhccccC-chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Confidence 55543322 236778888888899999999999875432 11111111 1122222222222222111 Q ss_pred HHhhhcchhhccceeeechhhhhccCHHHHHHHHHHHHhC--CCcCHHHHHHHHhCCCCCCccCceeee---cccccccc Q lcl|Aclame:pro 329 MDKYVGQYWVRKNRMKFDIDDVIQPDWEAKSESTQKMVNS--GVATPNEGREIMGLPRSDDPKADELYA---NSALQPLG 403 (518) Q Consensus 329 ln~~l~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~--g~~T~NE~R~~~g~~pi~~~~gD~~~~---~~n~~~~~ 403 (518) .+..-.+ .....+++.+......+..+.++.+.+++++ |+++..-+++.+|+-+-+-....++.- ......++ T Consensus 377 ~~~~~~~--~d~~~i~v~w~~~~~~s~~~~ad~~~kl~~~~~g~~s~et~~~~lg~~~d~~~e~~~~~~e~~~~~~~~~~ 454 (486) T protein:vir:42 377 MKGGDVP--PDMLRMETVWRDPSTPTYAAKADAATKLYGNGQGVIPRERARIDMGYSVKEREEMRRWDEEEAAMGLGLLG 454 (486) T ss_pred hcCCCcc--ccceeeeEEecCCCCCCHHHHHHHHHHHHhcccCCCCHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHH Confidence 1100001 1123455666677778888999999999886 678877788888875432111110000 00000011 Q ss_pred cccccCCCCCCCCCCCCcccCCCCCccCCccccccc Q lcl|Aclame:pro 404 ATPDGAVEGEEAPAPKRPASTPVASLDQSPPASVPG 439 (518) Q Consensus 404 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 439 (518) .........+..+.++++. .++.....+...+ T Consensus 455 ~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~ 486 (486) T protein:vir:42 455 TMVDADPTVPGSPSPTAPP----KPQPAIESSGGDA 486 (486) T ss_pred HhhcCCCCCCCCCCCCCCC----CCCcccCCCCCCC Confidence 1111000000000100000 0000000000000 No 156 >protein:vir:5961 Length: 503 # NCBI annotation: hypothetical protein # Family: family:all:125 # MgeID: mge:125 # MgeName: SPP1 # Cross-refs: genbank:acc:NP_690661;genbank:geneid:6329220;genbank:gi:22855055;interpro:IPR006428;uniprot:P54309;genbank:GeneID:955279 Probab=98.91 E-value=1.5e-08 Score=63.42 Aligned_cols=414 Identities=10% Similarity=0.020 Sum_probs=180.2 Q ss_pred CCCCCCCCCccccccccchhhhh------------hhccCccCCcccCccchh-------h-----HHHHhhhHHHHHHH Q lcl|Aclame:pro 1 MLLANGQTLSAPAMAELSPQMQD------------SYYYAPAVGMQLERQFSL-------Y-----GGIYKNQPWVRTVI 56 (518) Q Consensus 1 ~~f~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~-------~-----~~~~~~~~~v~~~v 56 (518) |+++...+............+.. ...+..+...-..+.... . ...-..++....+| T Consensus 14 ~~~~~~~~~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~YY~g~~~i~~~~~~~~~~~~~~~~~~~~~~~ri~~n~~~~iv 93 (503) T protein:vir:59 14 ELNEIIVESAKEIAEPDTTMIQKLIDEHNPEPLLKGVRYYMCENDIEKKRRTYYDAAGQQLVDDTKTNNRTSHAWHKLFV 93 (503) T ss_pred hHHHhhhhhhhhccchhHHHHHHHHHhhcHHHHHHHHHHhccccchhhccchhcccccccccccccccceeecchHHHHH Confidence 33443333322211111111111 111111000000000000 0 00001245677788 Q ss_pred HHHHHhhccCceEEEEecCCceeeecchHHHHHhhccCccCCHHHHHHHHHHHHHHcCCeeEEeeeCCCCceeeeeeeCC Q lcl|Aclame:pro 57 AKRAQALARLPVKCMFTSGDTETEEHDTGYAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQKNKSGTPEKLMPMHP 136 (518) Q Consensus 57 ~~ia~~ia~lp~~v~~~~~~~~~~~~~~~~~~l~~~PN~~~t~~~f~~~~~~~~ll~G~~~~~i~~~~~G~~~~l~~l~p 136 (518) +..+.-+.+-|+.+-..+ + .....+..++. | ........++.+++.+|.+|..+..+.+|++ .+..++| T Consensus 94 d~~~~yl~g~~~~~~~~d-~----~~~~~l~~~~~--n---~~~~~~~~~~~~~~~~G~~~~~v~~d~dg~~-~i~~~~p 162 (503) T protein:vir:59 94 DQKTQYLVGEPVTFTSDN-K----TLLEYVNELAD--D---DFDDILNETVKNMSNKGIEYWHPFVDEEGEF-DYVIFPA 162 (503) T ss_pred HHHHhhhhcCCeeeccCc-H----HHHHHHHHHHh--c---CHHHHHHHHHHHHhhCCeEEEEEeecCCCce-EEEEEcc Confidence 888888888887763211 0 11112222322 2 3455666688899999999999988888875 4788899 Q ss_pred cceEEEeccCc-ceE-----EEEeeccCCCCc-eeEEEeeeeeEEeecC------------------------------C Q lcl|Aclame:pro 137 SRVAIKRNSRT-GRY-----EYYFQAGAGVGT-QLVSFADDEVVPIRFF------------------------------N 179 (518) Q Consensus 137 ~~v~~~~~~~~-~~~-----~~~~~~~~~~~~-~~~~~~~~~vih~~~~------------------------------~ 179 (518) ..+.+.++... +.. +|.......... ....+.+..+.++... - T Consensus 163 ~~~~~i~d~~~~~~~~~~ir~~~~~~~~~~~~~~~evy~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 242 (503) T protein:vir:59 163 EEMIVVYKDNTRRDILFALRYYSYKGIMGEETQKAELYTDTHVYYYEKIDGVYQMDYSYGENNPRPHMTKGGQAIGWGRV 242 (503) T ss_pred ceeEEEEeCCCCCceEEEEEEEEEecCCCceEEEEEEEeCCcEEEEEEcCCcccccccccccccccceeecceeccCCcc Confidence 99888876532 211 111111110000 1111222222222110 0 Q ss_pred C----CcccccchHHHHHHHHHHHHHHHHHHHHHHHHccCCcceeeeeCCcCCHHHHHHHHHHHHHHhcCccccccceec Q lcl|Aclame:pro 180 P----DGLERGLSLMESLKSTIFSEDSSRNATAAMWKNAGRPNLVLRHEKRLSPEAQQRLREQFDRAHAGSSNTGKTMVV 255 (518) Q Consensus 180 ~----~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~p~gil~~~~~~~~e~~~~~~~~~~~~~~g~~n~g~~~vl 255 (518) | .+...|.|.+..+...++....+.....+.++..+.|-.+++--.....+ .+...+. .++++.+ T Consensus 243 Piv~~~nn~~~~sd~~~~~~liDa~d~~~s~~~~~~~~~~~~~~v~~g~~~~~~~---~~~~~~~--------~~~~~~~ 311 (503) T protein:vir:59 243 PIIPFKNNEEMVSDLKFYKDLIDNYDSITSSTMDSFSDFQQIVYVLKNYDGENPK---EFTANLR--------YHSVIKV 311 (503) T ss_pred ceEEecCCCCCCcchhhhHHHHHHHHHHHHHHHHHHHHhcCCeeEeecCCccccc---hhhhhhh--------cccceec Confidence 0 01235788888877777777766666666677777786666532222211 1111111 1234556 Q ss_pred cCCcccccccCChhhHHHHHHHHHHHHHHHHHhccchHhhcc-ccccccccHH----------HHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 256 EEGMEPIPLQLTAVEMQFIEARQLNREEVCGVYDIAPPIVHI-LDRATFSNIS----------AQMRAFYRDTMAIPIAR 324 (518) Q Consensus 256 ~~g~~~~~~~~~~~d~q~~e~~~~~~~~Ia~~fgVpp~~lg~-~~~~~~s~~e----------~~~~~~~~~~l~P~~~~ 324 (518) +++.+...+........+....+...+.|...-++|..-.+. .++.+....+ +.....+...|+-++.. T Consensus 312 ~~~~~~~~l~~~~~~~~~~~~~~~l~~~i~~~s~~p~~~~~~~~~~~Sg~Ai~~~~~~l~~k~~~~~~~~~~~l~~~~~~ 391 (503) T protein:vir:59 312 SGDGGVDTLRAEIPVDSAAKELERIQDELYKSAQAVDNSPETIGGGATGPALENLYALLDLKANMAERKIRAGLRLFFWF 391 (503) T ss_pred cCCCcceeEeccCCHHHHHHHHHHHHHHHHHHhcccCCCcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Confidence 655555444444444455556666666666666665322211 1111111111 11223333334333333 Q ss_pred HHHHHHhhhcchhhccceeeechhhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHHhCCCCCCccCceeeeccccccccc Q lcl|Aclame:pro 325 IQSAMDKYVGQYWVRKNRMKFDIDDVIQPDWEAKSESTQKMVNSGVATPNEGREIMGLPRSDDPKADELYANSALQPLGA 404 (518) Q Consensus 325 ie~~ln~~l~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~T~NE~R~~~g~~pi~~~~gD~~~~~~n~~~~~~ 404 (518) |...++..-.........+.+.+...+..|..+.++.+.+++.+|+++...+.++++. ++++....-.+-. +. T Consensus 392 i~~~~~~~~~~~~~~~~~i~i~f~~~~p~d~~~~~~~~~kl~~~GiiS~et~l~~l~~--v~d~~~E~~ri~~-----E~ 464 (503) T protein:vir:59 392 FAEYLRNTGKGDFNPDKELTMTFTRTRIQNDSEIVQSLVQGVTGGIMSKETAVARNPF--VQDPEEELARIEE-----EM 464 (503) T ss_pred HHHHHHhccCcccccccceeEEeCCCCCCCHHHHHHHHHHHHhCCCCchHHHHHhCCC--CCCHHHHHHHHHH-----HH Confidence 3333332111111122235666677788999999999999999999999888888754 3332111000000 00 Q ss_pred ccccCCCCCCCCCCCCcccCCCCCccCCccccccccChhhhcchh Q lcl|Aclame:pro 405 TPDGAVEGEEAPAPKRPASTPVASLDQSPPASVPGLSPTNSDRST 449 (518) Q Consensus 405 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 449 (518) ...............+. +.. +......++.+...+++.. T Consensus 465 --~~~~~~~~~~~~~~~~~-~~~---~~~~~~~~~~~~~~~g~~~ 503 (503) T protein:vir:59 465 --NQYAEMQGNLLDDEGGD-DDL---EEDDPNAGAAESGGAGQVS 503 (503) T ss_pred --HHHHhhhccccCccCCC-CCC---CcCCCCCCcccCCCCCCcC Confidence 00000000000000000 000 0000000011111111111 No 157 >protein:vir:96494 Length: 501 # NCBI annotation: portal protein # Family: family:all:125 # MgeID: mge:1620 # MgeName: 2972 # Cross-refs: genbank:acc:YP_238488;genbank:gi:66391764;genbank:GeneID:5176916 Probab=98.89 E-value=1.9e-08 Score=62.90 Aligned_cols=411 Identities=9% Similarity=0.019 Sum_probs=179.0 Q ss_pred CCCC-----C---C-CCCccccccccchhhhhhhccCccCCcccCcc---chhhHHHHhhhHHHHHHHHHHHHhhccCce Q lcl|Aclame:pro 1 MLLA-----N---G-QTLSAPAMAELSPQMQDSYYYAPAVGMQLERQ---FSLYGGIYKNQPWVRTVIAKRAQALARLPV 68 (518) Q Consensus 1 ~~f~-----~---~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~v~~~v~~ia~~ia~lp~ 68 (518) ++-. + . .....+.. .-+...+.+... ....+. .......-...++...+|+..+.-+-+-|+ T Consensus 37 ~~~~~~~i~~~i~~~~~~~~~r~----~~~~~yY~g~~~--~i~~~~~~~~~~~~~~ri~~n~~k~Ivd~~~~yl~g~p~ 110 (501) T protein:vir:96 37 MVNNWELLKNFINHHKLRQAPRI----QELLDYARGENH--DVLKSGRRKDNEMADKRAVHNYGRMISKFKTGYLAGNPI 110 (501) T ss_pred cCChHHHHHHHHHHHHHHHHHHH----HHHHHHhcCCCC--cccCccccCccccccceeecchHHHHHHHHhhhhcccCe Confidence 0000 0 0 00000000 000111111000 000000 000000112346677788888888888888 Q ss_pred EEEEecCCceeeecchHHHHHhhccCccCCHHHHHHHHHHHHHHcCCeeEEeeeCCCCceeeeeeeCCcceEEEeccCc- Q lcl|Aclame:pro 69 KCMFTSGDTETEEHDTGYAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQKNKSGTPEKLMPMHPSRVAIKRNSRT- 147 (518) Q Consensus 69 ~v~~~~~~~~~~~~~~~~~~l~~~PN~~~t~~~f~~~~~~~~ll~G~~~~~i~~~~~G~~~~l~~l~p~~v~~~~~~~~- 147 (518) .+.-.++. ....+..++.+....-........+..+++.+|.+|..+.++.+|.+ .+..++|..+.++++... T Consensus 111 ~~~~~~~~-----~~~~~~~~l~~~~~~n~~~~~~~~~~~~~~~~G~a~~~v~~dedg~~-~i~~~~p~~~~~v~d~~~~ 184 (501) T protein:vir:96 111 RVEYDDND-----DNSQNDDAIKRIGRINDLDSLNRTLIRDLSQTGRAYEVIYRSEYDET-RIKRLSPLETFVIYDNSLE 184 (501) T ss_pred eEeeCCcc-----chhHHHHHHHHHHHhcCHHHHHHHHHHHHhhcCeEEEEEEEcCCCce-EEEEEccceeEEEEcCCCC Confidence 77543321 11222233333333335566777888999999999999988888865 477789999988887532 Q ss_pred ceEEEE---eeccCCCCc-eeE-EEeeee------------------------eEEeecCCCCcccccchHHHHHHHHHH Q lcl|Aclame:pro 148 GRYEYY---FQAGAGVGT-QLV-SFADDE------------------------VVPIRFFNPDGLERGLSLMESLKSTIF 198 (518) Q Consensus 148 ~~~~~~---~~~~~~~~~-~~~-~~~~~~------------------------vih~~~~~~~~~~~G~s~~~~~~~~i~ 198 (518) +...+. |......++ ..+ .+.++. |++|+. ...|.|.+..+...++ T Consensus 185 ~~~~~~v~~~~~~~~~~~~~~~~vyt~~~i~~~~~~~~~~~~~~~~~~~g~vPvv~~~n-----n~~g~sd~e~v~~liD 259 (501) T protein:vir:96 185 DNSIAAVRYYNRGTLQSAKDVVEIYTDEHIYTLDASDDFNEISVTTHAFGTVPITEYLN-----NIDGIGDYETELYLID 259 (501) T ss_pred CceEEEEEEEEeecCCCcEEEEEEEcCCcEEEEeeCCCceeccccccCCCccceEEecC-----CccCCCchhhhHHHHH Confidence 221111 111111111 111 111122 333332 1358888888888888 Q ss_pred HHHHHHHHHHHHHHccCCcceeeeeCCcCC-HHHHHHHHHHHHHHhcCccccccceeccCCcccccccCChhhHHHHHHH Q lcl|Aclame:pro 199 SEDSSRNATAAMWKNAGRPNLVLRHEKRLS-PEAQQRLREQFDRAHAGSSNTGKTMVVEEGMEPIPLQLTAVEMQFIEAR 277 (518) Q Consensus 199 ~~~~~~~~~~~~~~ng~~p~gil~~~~~~~-~e~~~~~~~~~~~~~~g~~n~g~~~vl~~g~~~~~~~~~~~d~q~~e~~ 277 (518) ....+.....+.+...+.|-.++....... ++....++. .........+.......+.+...++.......+.... T Consensus 260 a~d~~~s~~~~~~~~~~~~~l~i~G~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 336 (501) T protein:vir:96 260 LYDSAESDTANHMSDMADAILAIYGDLALPKGMQASDMKR---TRLMQLKPPKSADGKEGTVKAEYLTKSYDVSGAEAYK 336 (501) T ss_pred HHHHHHHHHHHHHHHhcCceeeeecccccCcccchhhhhh---cCeeeecccccccccccCcceeeEeccCCHHHHHHHH Confidence 777777667777777777766665432221 111111111 0000011111111223344444444444445566777 Q ss_pred HHHHHHHHHHhccchHhhcccc-ccccccHH----------HHHHHHHHHHHHHHHHHHHHHHHhhhcchhhccceeeec Q lcl|Aclame:pro 278 QLNREEVCGVYDIAPPIVHILD-RATFSNIS----------AQMRAFYRDTMAIPIARIQSAMDKYVGQYWVRKNRMKFD 346 (518) Q Consensus 278 ~~~~~~Ia~~fgVpp~~lg~~~-~~~~s~~e----------~~~~~~~~~~l~P~~~~ie~~ln~~l~~~~~~~~~~~fd 346 (518) +...+.|+..-++|..-.+... +.+....+ ......+..+|+-.++.+...++..-.........+++. T Consensus 337 ~~l~~~I~~~s~~p~~~~~~~~~n~Sg~Al~~~~~~l~~ka~~~~~~~~~~l~~~~~li~~~~~~~~~~~~~d~~~i~i~ 416 (501) T protein:vir:96 337 TRLNRDIHIFTNTPDMSDTNFSGNTSGEALKYKLFGLDQDRVDTQSQFTKGLKRRYRLAARIGSLVNEFKDFDESLLKIT 416 (501) T ss_pred HHHHHHHHHHhCCcccCcccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccceEE Confidence 8888899999899875554322 11111111 111122333333333333222221111011111234555 Q ss_pred hhhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHHhCCCCCCccCceeeecccccccccccccCCCCCCCCCCCCcccCCC Q lcl|Aclame:pro 347 IDDVIQPDWEAKSESTQKMVNSGVATPNEGREIMGLPRSDDPKADELYANSALQPLGATPDGAVEGEEAPAPKRPASTPV 426 (518) Q Consensus 347 ~~~l~~~d~~~~~~~~~~~~~~g~~T~NE~R~~~g~~pi~~~~gD~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 426 (518) +...+..|..+.++.+.++. |+++..-+.+++++ +++|....-. +................ .+..... T Consensus 417 f~~~~p~n~~e~ad~~~kl~--g~iS~et~~~~l~~--v~D~~~E~~r-------i~~E~~~~~~~~~~~~~-~~~~~~~ 484 (501) T protein:vir:96 417 FTPNLPKSLNEQVSILTGLG--GQVSQETALSLSGL--VESPNEELDK-------INKEMSEIDFKGYSNDF-NEHVGKY 484 (501) T ss_pred eCCCCCcCHHHHHHHHHHHh--ccCchHHHHHhCCC--CCCHHHHHHH-------HHHHHHHhhccccccch-hhccccc Confidence 66778889999999999885 78888777777654 3332211000 00000000000000000 0000000 Q ss_pred CCccCCccccccccChhhhcchhH Q lcl|Aclame:pro 427 ASLDQSPPASVPGLSPTNSDRSTD 450 (518) Q Consensus 427 ~~~~~~~~~~~~~~~~~~~~~~~~ 450 (518) .++ ..+.++++.+++.+ T Consensus 485 ~~~-------~~e~~~d~~e~~~~ 501 (501) T protein:vir:96 485 TDE-------VKETHTDDFEREYE 501 (501) T ss_pred CCc-------CCCCCCCccccccC Confidence 000 01111111111111 No 158 >protein:vir:38 Length: 496 # NCBI annotation: putative portal protein # Family: family:all:898 # MgeID: mge:2 # MgeName: A118 # Cross-refs: genbank:acc:NP_463464;swissprot:trembl:q9t1c0;genbank:gi:16798786;uniprot:Q9T1C0;genbank:GeneID:922383 Probab=98.87 E-value=1.8e-08 Score=63.08 Aligned_cols=392 Identities=11% Similarity=0.015 Sum_probs=179.7 Q ss_pred CCCCCCCCCccccccc--cc----hhh---hhhhccCccCCcccCccchh-----hHHHHhhhHHHHHHHHHHHHhhccC Q lcl|Aclame:pro 1 MLLANGQTLSAPAMAE--LS----PQM---QDSYYYAPAVGMQLERQFSL-----YGGIYKNQPWVRTVIAKRAQALARL 66 (518) Q Consensus 1 ~~f~~~~~~~~~~~~~--~~----~~~---~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~v~~~v~~ia~~ia~l 66 (518) +||-++.-....-... .+ ..+ ...+.+.. ..+...... .............+++..|+-+.+- T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~yy~g~~---~~~~~~~~~~~~~~~~~~~~~~n~~k~i~~~~a~~l~~~ 91 (496) T protein:vir:38 15 RMGLLKALKDVKDHKKVNANDEDYKYIDMWKRLYQGHY---AEWHNLNYEHNGNPVNRRQLSMNLPKVTAKYMSKLLFNE 91 (496) T ss_pred HhccchhhHHHHhcCCCcCCHHHHHHHHHHHHHhcCCC---chhhcchhccCCCccccceeecchHHHHHHHHhhhhhCC Confidence 4444322111100000 00 011 11121110 000000000 0000112245566788888888777 Q ss_pred ceEEEEecCCceeeecchHHHHHhhccCccCCHHHHHHHHHHHHHHcCCeeEEeeeCCCCceeeeeeeCCcceEEEeccC Q lcl|Aclame:pro 67 PVKCMFTSGDTETEEHDTGYAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQKNKSGTPEKLMPMHPSRVAIKRNSR 146 (518) Q Consensus 67 p~~v~~~~~~~~~~~~~~~~~~l~~~PN~~~t~~~f~~~~~~~~ll~G~~~~~i~~~~~G~~~~l~~l~p~~v~~~~~~~ 146 (518) |..+.-.+ ......+.+-...-....-...++.+.+.+|.+|+.+..+.+|.+ .+..++|..+.+..... T Consensus 92 p~~i~~~d---------~~~~e~l~~~~~~n~f~~~~~~~~~~a~~~G~~~~~~~~D~~~~~-~i~~v~~~~~~P~~~~~ 161 (496) T protein:vir:38 92 KVKINIDD---------KAAEEFVLNVLKTNGFTKNMERYIEYGEAMGGFVIKVYHDGNKNV-KVSFATADCMYPLSNDS 161 (496) T ss_pred cceEeeCC---------hHHHHHHHHHHhccCHHHHHHHHHHHHhhhCcEEEEEEEcCCCcE-EEEEEcccceEEEEecC Confidence 77653221 122222222222334556666778889999999999998887764 46667777777654443 Q ss_pred cceE-------------EEE------------------eeccC-CCCceeEE----------------EeeeeeEEeecC Q lcl|Aclame:pro 147 TGRY-------------EYY------------------FQAGA-GVGTQLVS----------------FADDEVVPIRFF 178 (518) Q Consensus 147 ~~~~-------------~~~------------------~~~~~-~~~~~~~~----------------~~~~~vih~~~~ 178 (518) +... .|. |.... ...+..+. ++...+.|++.+ T Consensus 162 ~~~~~~~f~~~~~~~~~~y~~le~h~~~~~~~~I~~~~y~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~f~~~~~~ 241 (496) T protein:vir:38 162 ENVDECVIANSFHKNNKYYTLLEWNEWQGDVYTVTTELYQSDDPNELGTKVSLTLLFDDIEPVVPLPDFTRPTFIYIKPN 241 (496) T ss_pred CcEEEEEEEEEEEeCCeEEEEEEEEEEeCceEEEEEEEEecCCccccCccccccccccccccceeecCCCcceEEEecCC Confidence 3221 010 00000 00011110 011123444433 Q ss_pred CC----CcccccchHHHHHHHHHHHHHHHHHHHHHHHHccCCcceeee-----eCCcCCHHHHHHHHHHHHHHhcCcccc Q lcl|Aclame:pro 179 NP----DGLERGLSLMESLKSTIFSEDSSRNATAAMWKNAGRPNLVLR-----HEKRLSPEAQQRLREQFDRAHAGSSNT 249 (518) Q Consensus 179 ~~----~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~p~gil~-----~~~~~~~e~~~~~~~~~~~~~~g~~n~ 249 (518) -+ ....+|+|.+..+...++..........+-|+. +.+..++. .......+.. ..|.. .... T Consensus 242 ~~N~~~~~~p~G~Sd~~~~~~lid~ld~~~s~~~~~~~~-~~~~i~v~~~~l~~~~~~~g~~~----~~~~~----~~~~ 312 (496) T protein:vir:38 242 IANNKNLTSPLGISVYANALDTLKTLDLMFDSYYQEFKL-GKKKVLVPSSFVKTAVNLDGSTT----QYFDS----TDEA 312 (496) T ss_pred cccccccCCcCCCchHhhHHHHHHHHHHHHHHHHHHHhh-cccceecchHHhhccCCCCCccc----cCCCC----ccce Confidence 22 234579999999999888887776666666765 34443331 0001010000 00000 0000 Q ss_pred ccc---eeccCCcccccccCChhhHHHHHHHHHHHHHHHHHhccchHhhccccccccccHHHH---H----------HHH Q lcl|Aclame:pro 250 GKT---MVVEEGMEPIPLQLTAVEMQFIEARQLNREEVCGVYDIAPPIVHILDRATFSNISAQ---M----------RAF 313 (518) Q Consensus 250 g~~---~vl~~g~~~~~~~~~~~d~q~~e~~~~~~~~Ia~~fgVpp~~lg~~~~~~~s~~e~~---~----------~~~ 313 (518) ... .-.+++..++.++.....-++.+..+...+.|+...|+||..+|...++.. +..+. . ... T Consensus 313 ~~~~~~~~~~~~~~i~~~~~~i~~e~~~~~l~~~l~~i~~~~g~~~~~f~~~~~g~~-tAtei~~~~~~l~~~~~~~~~~ 391 (496) T protein:vir:38 313 FFLYQGDQDDNGKAIKDISVEIRSTEFIESINAMLRIYAMQVGLSAGTFTFDENGLK-TATEVVSEKSETYQTKNSHSQL 391 (496) T ss_pred EEEeecCCCcccccceeeccccCHHHHHHHHHHHHHHHHHhhCCChhhcCCCccccc-hHHHHHHHHHHHHHHHHHHHHH Confidence 000 111223345556655566778888888899999999999999987544322 22211 1 122 Q ss_pred HHHHHHHHHHHHHHHHHhhhc-c-hhhccceeeechhhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHH-hCCCCCCccC Q lcl|Aclame:pro 314 YRDTMAIPIARIQSAMDKYVG-Q-YWVRKNRMKFDIDDVIQPDWEAKSESTQKMVNSGVATPNEGREIM-GLPRSDDPKA 390 (518) Q Consensus 314 ~~~~l~P~~~~ie~~ln~~l~-~-~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~T~NE~R~~~-g~~pi~~~~g 390 (518) ++.+|..++..+....+.... . .......+.|.+++-+..|..+.++.+.+++.+|+++.-.++..+ |. +++.. T Consensus 392 ~~~~l~~l~~~il~~~~~~~~~~g~~~~~~~i~v~f~d~i~~d~~~~~~~~~~~~~~GiiS~et~l~~~~~~---~d~ea 468 (496) T protein:vir:38 392 IEQGIKEMIVSILEVGKFIEAYSGEVVELDTITVDFDDSIAQDEDTTINRYTNAKNQGMIPLKIALQRAWNI---TEAEA 468 (496) T ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCCCCccceEEEeCCCCCCCHHHHHHHHHHHHhcCCCCHHHHHHhcCCC---ChHHH Confidence 233333443333322221111 1 111234456666677888999999999999999999988887654 33 22223 Q ss_pred ceeeecccccccccccccCCCCCCCCCCCCcccCCCCCccC Q lcl|Aclame:pro 391 DELYANSALQPLGATPDGAVEGEEAPAPKRPASTPVASLDQ 431 (518) Q Consensus 391 D~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 431 (518) .+.+ ...... .....+ ........+++ + T Consensus 469 ~~el--------~ri~~E--~~~~~~--~~d~~~~~~~~-e 496 (496) T protein:vir:38 469 DEWA--------EMLAKE--KQAEMP--NNDMNGIFGEE-E 496 (496) T ss_pred HHHH--------HHHHHh--hhccCc--cccccCCCCCC-C Confidence 2221 110000 000000 00000000000 1 No 159 >protein:vir:105819 Length: 456 # NCBI annotation: gp3 # Family: family:all:5096 # MgeID: mge:1636 # MgeName: PMC # Cross-refs: genbank:acc:YP_655764;genbank:gi:109522087;genbank:GeneID:4157627 Probab=98.82 E-value=3.6e-08 Score=61.40 Aligned_cols=383 Identities=11% Similarity=0.069 Sum_probs=176.5 Q ss_pred CCCccccc------------cccchhhhhhhccCccCCcccCcc-chhhHHH--HhhhHHHHHHHHHHHHhhccCceEEE Q lcl|Aclame:pro 7 QTLSAPAM------------AELSPQMQDSYYYAPAVGMQLERQ-FSLYGGI--YKNQPWVRTVIAKRAQALARLPVKCM 71 (518) Q Consensus 7 ~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~v~~~v~~ia~~ia~lp~~v~ 71 (518) =++..|.- ...-..+...+.+..... .+.+. ...+... -..+.+...+|+..+..+-.-|+.+- T Consensus 1 ~~~~t~~~~~~~l~~~~~~~~~r~~~l~~Yy~g~~~i~-~~~~~~~~~~~~~~~k~~~n~~~~ivd~~~~~l~~~~~~~~ 79 (456) T protein:vir:10 1 MTASTPAEWLPVLTKRIDDGMSRVRLLARYSNGDAPLP-ELTRNTSAAWRSFQREARTNWGLMVRDSVADRIIPNGITVG 79 (456) T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCch-hcCcccChhhhhhhhhhhcchHHHHHHHHHhhhccCCeecC Confidence 11111100 000001111111111000 01111 1111111 12345778889999988888888763 Q ss_pred EecCCceeeecchHHHHHhhccCccCCHHHHHHHHHHHHHHcCCeeEEeeeCCCCceeeeeeeCCcceEEEeccCcce-- Q lcl|Aclame:pro 72 FTSGDTETEEHDTGYAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQKNKSGTPEKLMPMHPSRVAIKRNSRTGR-- 149 (518) Q Consensus 72 ~~~~~~~~~~~~~~~~~l~~~PN~~~t~~~f~~~~~~~~ll~G~~~~~i~~~~~G~~~~l~~l~p~~v~~~~~~~~~~-- 149 (518) ..+ +. .....+..++.+ | ....+...+..+++.+|.+|..+..+.+|.+ .+..++|..+.++++..... T Consensus 80 ~~~-d~---~~~~~~~~i~~~-N---~~d~~~~~~~~~a~i~G~ay~~v~~d~~g~~-~i~~~~p~~~~~i~d~~~~~~~ 150 (456) T protein:vir:10 80 GSA-DS---DLALRARRIWRD-N---RMDSVCKQWVKYGLDFGESYLTCWRRDDGTA-TITADSPETMVVSVDPLQPWRI 150 (456) T ss_pred CCC-Cc---chHHHHHHHHHh-c---ChhhHHHHHHHHHhhcCeeEEEEeeCCCCce-EEEEEccceeEEEEcCCCCcce Confidence 211 11 112223444443 3 2344556678899999999998888888865 46778899888887754321 Q ss_pred ---EEEEeeccCCCC------------------------ceeEEEeee------------eeEE-eecCCCCcccccchH Q lcl|Aclame:pro 150 ---YEYYFQAGAGVG------------------------TQLVSFADD------------EVVP-IRFFNPDGLERGLSL 189 (518) Q Consensus 150 ---~~~~~~~~~~~~------------------------~~~~~~~~~------------~vih-~~~~~~~~~~~G~s~ 189 (518) +.|+...+.... ......... .++. ...++ ..|+|. T Consensus 151 ~~~i~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pvv~~~N----~~g~gd 226 (456) T protein:vir:10 151 RAAMRWWRDLDAESDFAIVWSGDGWQKFARPCFVQSSSRRRLVTRISDSWVPVGDAVVTGSPPPVVVYQN----PDGMGE 226 (456) T ss_pred EEEEEEEEecCCceeEEEEEeccceeEEEEEEEEeecccceeeeecCCceeeccccCCCCCceeEEEecC----CCCCch Confidence 111110000000 000000000 0000 01111 247888 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHccCCcceeeeeCCc---CCHHHHHH--HHHHHHHHhcCccccccceeccCCcccccc Q lcl|Aclame:pro 190 MESLKSTIFSEDSSRNATAAMWKNAGRPNLVLRHEKR---LSPEAQQR--LREQFDRAHAGSSNTGKTMVVEEGMEPIPL 264 (518) Q Consensus 190 ~~~~~~~i~~~~~~~~~~~~~~~ng~~p~gil~~~~~---~~~e~~~~--~~~~~~~~~~g~~n~g~~~vl~~g~~~~~~ 264 (518) ++.....++....+.--........+.|.-++..... ..++.... ....|.. ..+.+..++++.++..+ T Consensus 227 ~e~vi~liDa~~~~~s~~~~~~~~~a~~~~~i~G~~~~~~~~d~~g~~~~~~~~~~~------~~~~~~~~~~~~~~~q~ 300 (456) T protein:vir:10 227 VEPHIDIINRINRAELQLLSTMAIQAFRQRALKSTEHGLPNVDENGNAIDYASIFEA------APGALWELPPGVDIWES 300 (456) T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHhhhHhHhhhccCcccccccccccccchhhhhhh------hccccccCCCCcceEEe Confidence 8877766666554444333343444444433322110 01111111 1122222 12345667788887666 Q ss_pred cCChhhHHHHHHHHHHHHHHHHHhccchHhhccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHhhh-------cchh Q lcl|Aclame:pro 265 QLTAVEMQFIEARQLNREEVCGVYDIAPPIVHILDRATFSNISAQMRAFYRDTMAIPIARIQSAMDKYV-------GQYW 337 (518) Q Consensus 265 ~~~~~d~q~~e~~~~~~~~Ia~~fgVpp~~lg~~~~~~~s~~e~~~~~~~~~~l~P~~~~ie~~ln~~l-------~~~~ 337 (518) ....- ..|.+.++..+..|+..-++|++.+|.... | .+.+ ...+....+.-.+...+..+...| +... T Consensus 301 ~~~~~-~~~~~~l~~~i~~~~~~s~~p~~~~~~~~~-N-~Sg~--Ai~~~~~~l~~k~~~~~~~f~~~l~~~~rl~~~~~ 375 (456) T protein:vir:10 301 QANDF-TPMLSAIKEHIRQLSSATKTPLPMLMPDSA-N-QSAE--GAHNIEKGFLFKCEDRLSIAKIGLEAILVKALQIE 375 (456) T ss_pred cccCh-hHHHHHHHHHHHHHHhccCCChHHhccccc-C-hHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc Confidence 54322 237888899999999999999999985321 1 1111 112222222222222222222111 1111 Q ss_pred h--ccceeeechhhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHHhCCCCCCc--cCceeeecccccccccccccCCCCC Q lcl|Aclame:pro 338 V--RKNRMKFDIDDVIQPDWEAKSESTQKMVNSGVATPNEGREIMGLPRSDDP--KADELYANSALQPLGATPDGAVEGE 413 (518) Q Consensus 338 ~--~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~T~NE~R~~~g~~pi~~~--~gD~~~~~~n~~~~~~~~~~~~~~~ 413 (518) + ....+++.+.+....+..+.++.+.+++..|+++..-+++++|+.+-+-+ ..+..- ..... T Consensus 376 g~~~~~~~~v~w~~~~~~~~~~~ada~~kl~~~gi~~~~~~~~~lg~~~~~i~~~e~er~~---------~e~~~----- 441 (456) T protein:vir:10 376 GESVEDTVDVSFESPDRVTLGEKYSAASLAKAAGESWASIRRNILNYNADQIKQDDLDRAR---------EQITL----- 441 (456) T ss_pred CCCcccceeEEecCCCCcCHHHHHHHHHHHHHcCCChHHHHHhhCCCCHHHHHHHHHHHHH---------HHHHH----- Confidence 1 22345566667778888999999999999999988888888888653100 011100 00000 Q ss_pred CCCCCCCcccCCCCCccC Q lcl|Aclame:pro 414 EAPAPKRPASTPVASLDQ 431 (518) Q Consensus 414 ~~~~~~~~~~~~~~~~~~ 431 (518) ...++...+..+... T Consensus 442 ---~~~~~~~~~~~~~~~ 456 (456) T protein:vir:10 442 ---FAGNPVQRPQEDGSR 456 (456) T ss_pred ---HhhhhhhcCCCCCCC Confidence 000111111111111 No 160 >protein:vir:102602 Length: 456 # NCBI annotation: gp3 # Family: family:all:5096 # MgeID: mge:1661 # MgeName: Llij # Cross-refs: genbank:acc:YP_654999;genbank:gi:109392189;genbank:GeneID:4157224 Probab=98.82 E-value=3.6e-08 Score=61.40 Aligned_cols=383 Identities=11% Similarity=0.069 Sum_probs=176.5 Q ss_pred CCCccccc------------cccchhhhhhhccCccCCcccCcc-chhhHHH--HhhhHHHHHHHHHHHHhhccCceEEE Q lcl|Aclame:pro 7 QTLSAPAM------------AELSPQMQDSYYYAPAVGMQLERQ-FSLYGGI--YKNQPWVRTVIAKRAQALARLPVKCM 71 (518) Q Consensus 7 ~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~v~~~v~~ia~~ia~lp~~v~ 71 (518) =++..|.- ...-..+...+.+..... .+.+. ...+... -..+.+...+|+..+..+-.-|+.+- T Consensus 1 ~~~~t~~~~~~~l~~~~~~~~~r~~~l~~Yy~g~~~i~-~~~~~~~~~~~~~~~k~~~n~~~~ivd~~~~~l~~~~~~~~ 79 (456) T protein:vir:10 1 MTASTPAEWLPVLTKRIDDGMSRVRLLARYSNGDAPLP-ELTRNTSAAWRSFQREARTNWGLMVRDSVADRIIPNGITVG 79 (456) T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCch-hcCcccChhhhhhhhhhhcchHHHHHHHHHhhhccCCeecC Confidence 11111100 000001111111111000 01111 1111111 12345778889999988888888763 Q ss_pred EecCCceeeecchHHHHHhhccCccCCHHHHHHHHHHHHHHcCCeeEEeeeCCCCceeeeeeeCCcceEEEeccCcce-- Q lcl|Aclame:pro 72 FTSGDTETEEHDTGYAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQKNKSGTPEKLMPMHPSRVAIKRNSRTGR-- 149 (518) Q Consensus 72 ~~~~~~~~~~~~~~~~~l~~~PN~~~t~~~f~~~~~~~~ll~G~~~~~i~~~~~G~~~~l~~l~p~~v~~~~~~~~~~-- 149 (518) ..+ +. .....+..++.+ | ....+...+..+++.+|.+|..+..+.+|.+ .+..++|..+.++++..... T Consensus 80 ~~~-d~---~~~~~~~~i~~~-N---~~d~~~~~~~~~a~i~G~ay~~v~~d~~g~~-~i~~~~p~~~~~i~d~~~~~~~ 150 (456) T protein:vir:10 80 GSA-DS---DLALRARRIWRD-N---RMDSVCKQWVKYGLDFGESYLTCWRRDDGTA-TITADSPETMVVSVDPLQPWRI 150 (456) T ss_pred CCC-Cc---chHHHHHHHHHh-c---ChhhHHHHHHHHHhhcCeeEEEEeeCCCCce-EEEEEccceeEEEEcCCCCcce Confidence 211 11 112223444443 3 2344556678899999999998888888865 46778899888887754321 Q ss_pred ---EEEEeeccCCCC------------------------ceeEEEeee------------eeEE-eecCCCCcccccchH Q lcl|Aclame:pro 150 ---YEYYFQAGAGVG------------------------TQLVSFADD------------EVVP-IRFFNPDGLERGLSL 189 (518) Q Consensus 150 ---~~~~~~~~~~~~------------------------~~~~~~~~~------------~vih-~~~~~~~~~~~G~s~ 189 (518) +.|+...+.... ......... .++. ...++ ..|+|. T Consensus 151 ~~~i~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pvv~~~N----~~g~gd 226 (456) T protein:vir:10 151 RAAMRWWRDLDAESDFAIVWSGDGWQKFARPCFVQSSSRRRLVTRISDSWVPVGDAVVTGSPPPVVVYQN----PDGMGE 226 (456) T ss_pred EEEEEEEEecCCceeEEEEEeccceeEEEEEEEEeecccceeeeecCCceeeccccCCCCCceeEEEecC----CCCCch Confidence 111110000000 000000000 0000 01111 247888 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHccCCcceeeeeCCc---CCHHHHHH--HHHHHHHHhcCccccccceeccCCcccccc Q lcl|Aclame:pro 190 MESLKSTIFSEDSSRNATAAMWKNAGRPNLVLRHEKR---LSPEAQQR--LREQFDRAHAGSSNTGKTMVVEEGMEPIPL 264 (518) Q Consensus 190 ~~~~~~~i~~~~~~~~~~~~~~~ng~~p~gil~~~~~---~~~e~~~~--~~~~~~~~~~g~~n~g~~~vl~~g~~~~~~ 264 (518) ++.....++....+.--........+.|.-++..... ..++.... ....|.. ..+.+..++++.++..+ T Consensus 227 ~e~vi~liDa~~~~~s~~~~~~~~~a~~~~~i~G~~~~~~~~d~~g~~~~~~~~~~~------~~~~~~~~~~~~~~~q~ 300 (456) T protein:vir:10 227 VEPHIDIINRINRAELQLLSTMAIQAFRQRALKSTEHGLPNVDENGNAIDYASIFEA------APGALWELPPGVDIWES 300 (456) T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHhhhHhHhhhccCcccccccccccccchhhhhhh------hccccccCCCCcceEEe Confidence 8877766666554444333343444444433322110 01111111 1122222 12345667788887666 Q ss_pred cCChhhHHHHHHHHHHHHHHHHHhccchHhhccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHhhh-------cchh Q lcl|Aclame:pro 265 QLTAVEMQFIEARQLNREEVCGVYDIAPPIVHILDRATFSNISAQMRAFYRDTMAIPIARIQSAMDKYV-------GQYW 337 (518) Q Consensus 265 ~~~~~d~q~~e~~~~~~~~Ia~~fgVpp~~lg~~~~~~~s~~e~~~~~~~~~~l~P~~~~ie~~ln~~l-------~~~~ 337 (518) ....- ..|.+.++..+..|+..-++|++.+|.... | .+.+ ...+....+.-.+...+..+...| +... T Consensus 301 ~~~~~-~~~~~~l~~~i~~~~~~s~~p~~~~~~~~~-N-~Sg~--Ai~~~~~~l~~k~~~~~~~f~~~l~~~~rl~~~~~ 375 (456) T protein:vir:10 301 QANDF-TPMLSAIKEHIRQLSSATKTPLPMLMPDSA-N-QSAE--GAHNIEKGFLFKCEDRLSIAKIGLEAILVKALQIE 375 (456) T ss_pred cccCh-hHHHHHHHHHHHHHHhccCCChHHhccccc-C-hHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc Confidence 54322 237888899999999999999999985321 1 1111 112222222222222222222111 1111 Q ss_pred h--ccceeeechhhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHHhCCCCCCc--cCceeeecccccccccccccCCCCC Q lcl|Aclame:pro 338 V--RKNRMKFDIDDVIQPDWEAKSESTQKMVNSGVATPNEGREIMGLPRSDDP--KADELYANSALQPLGATPDGAVEGE 413 (518) Q Consensus 338 ~--~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~T~NE~R~~~g~~pi~~~--~gD~~~~~~n~~~~~~~~~~~~~~~ 413 (518) + ....+++.+.+....+..+.++.+.+++..|+++..-+++++|+.+-+-+ ..+..- ..... T Consensus 376 g~~~~~~~~v~w~~~~~~~~~~~ada~~kl~~~gi~~~~~~~~~lg~~~~~i~~~e~er~~---------~e~~~----- 441 (456) T protein:vir:10 376 GESVEDTVDVSFESPDRVTLGEKYSAASLAKAAGESWASIRRNILNYNADQIKQDDLDRAR---------EQITL----- 441 (456) T ss_pred CCCcccceeEEecCCCCcCHHHHHHHHHHHHHcCCChHHHHHhhCCCCHHHHHHHHHHHHH---------HHHHH----- Confidence 1 22345566667778888999999999999999988888888888653100 011100 00000 Q ss_pred CCCCCCCcccCCCCCccC Q lcl|Aclame:pro 414 EAPAPKRPASTPVASLDQ 431 (518) Q Consensus 414 ~~~~~~~~~~~~~~~~~~ 431 (518) ...++...+..+... T Consensus 442 ---~~~~~~~~~~~~~~~ 456 (456) T protein:vir:10 442 ---FAGNPVQRPQEDGSR 456 (456) T ss_pred ---HhhhhhhcCCCCCCC Confidence 000111111111111 No 161 >protein:vir:2732 Length: 501 # NCBI annotation: putative portal protein # Family: family:all:125 # MgeID: mge:58 # MgeName: O1205 # Cross-refs: genbank:acc:NP_695105;genbank:gi:23455874;genbank:GeneID:955614 Probab=98.79 E-value=4.7e-08 Score=60.78 Aligned_cols=413 Identities=10% Similarity=0.041 Sum_probs=178.9 Q ss_pred CCCCCC-----------CCCccccccccchhhhhhhccCc-cCCcccCccchhhHHHHhhhHHHHHHHHHHHHhhccCce Q lcl|Aclame:pro 1 MLLANG-----------QTLSAPAMAELSPQMQDSYYYAP-AVGMQLERQFSLYGGIYKNQPWVRTVIAKRAQALARLPV 68 (518) Q Consensus 1 ~~f~~~-----------~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~v~~~v~~ia~~ia~lp~ 68 (518) -+.... .....+.. ..+...+.+.. ..-.............-...+....+|+..+.-+-+-|+ T Consensus 35 ~~~~~~~~~l~~~i~~~~~~~~~r~----~~l~~yY~g~~~~i~~~~~~~~~~~~~~ki~~n~~k~Ivd~~~~yl~g~p~ 110 (501) T protein:vir:27 35 ELMVNNWELLKNFINHHKLRQAPRI----QELLDYARGENHDVLQFGRRKDREMADKRAVHNYGRMISKFKTGYLAGNPI 110 (501) T ss_pred ccccccHHHHHHHHHHHHHHHHHHH----HHHHHHhcCCCccccccCccCccccccceeccchHHHHHHHHhhhhcccCe Confidence 000000 00000000 01111111110 000000000000000112346777888988888888888 Q ss_pred EEEEecCCceeeecchHHHHHhhccCccCCHHHHHHHHHHHHHHcCCeeEEeeeCCCCceeeeeeeCCcceEEEeccCc- Q lcl|Aclame:pro 69 KCMFTSGDTETEEHDTGYAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQKNKSGTPEKLMPMHPSRVAIKRNSRT- 147 (518) Q Consensus 69 ~v~~~~~~~~~~~~~~~~~~l~~~PN~~~t~~~f~~~~~~~~ll~G~~~~~i~~~~~G~~~~l~~l~p~~v~~~~~~~~- 147 (518) .+.-.+... ...+...+.+-...-........+..+++.+|.+|..+..+.+|.+ .+..++|..+.++++... T Consensus 111 ~~~~~d~~~-----~~~~~~~l~~~~~~n~~~~~~~~~~~~~~~~G~a~~~vy~ded~~~-~i~~~~p~~~~~v~d~~~~ 184 (501) T protein:vir:27 111 RVEYDDNDN-----NSQNDDTIKRIGRINDIDSHNRTLIRDLSQTGRAYEVIYRNEYDET-RIKRLNPLETFVIYDNSLE 184 (501) T ss_pred eEecCCccc-----hHHHHHHHHHHHHhcChhHHHHHHHHHHhhCCeEEEEEEeCCCCce-EEEEEccceeEEEecCCCC Confidence 775433211 1122222222222234556777888999999999999988888865 467788988888876532 Q ss_pred ceEEE---EeeccCCCC-ceeE-EEeee------------------------eeEEeecCCCCcccccchHHHHHHHHHH Q lcl|Aclame:pro 148 GRYEY---YFQAGAGVG-TQLV-SFADD------------------------EVVPIRFFNPDGLERGLSLMESLKSTIF 198 (518) Q Consensus 148 ~~~~~---~~~~~~~~~-~~~~-~~~~~------------------------~vih~~~~~~~~~~~G~s~~~~~~~~i~ 198 (518) ....+ .|......+ ...+ .+.++ .|++|+. ...|.|.+..+...++ T Consensus 185 ~~~~~~ir~~~~~~~~~~~~~~~vyt~~~v~~~~~~~~~~~~~~~~~~~g~vPvv~~~n-----n~~g~sd~e~v~~liD 259 (501) T protein:vir:27 185 DNSIAAVRYYNRGTLQNAKDVVEIYTNEHIYTLDASDDFNEISVTTHAFGTVPITEFLN-----NVDGIGDYETELYLID 259 (501) T ss_pred CceEEEEEEEEeeecCCcEEEEEEEeCCeEEEEEeCCceeeccccccCCCcccEEEecC-----CCCCCCchhhhHHHHH Confidence 21111 111111111 0011 11111 1333332 2358888888888888 Q ss_pred HHHHHHHHHHHHHHccCCcceeeeeCCcC-CHHHHHHHHHHHHHHhcCccccccceeccCCcccccccCChhhHHHHHHH Q lcl|Aclame:pro 199 SEDSSRNATAAMWKNAGRPNLVLRHEKRL-SPEAQQRLREQFDRAHAGSSNTGKTMVVEEGMEPIPLQLTAVEMQFIEAR 277 (518) Q Consensus 199 ~~~~~~~~~~~~~~ng~~p~gil~~~~~~-~~e~~~~~~~~~~~~~~g~~n~g~~~vl~~g~~~~~~~~~~~d~q~~e~~ 277 (518) ....+..-..+.+.....|-.++...... .++....++.. ........+......++.++..++....+..+.... T Consensus 260 a~d~~~S~~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 336 (501) T protein:vir:27 260 LYDSAESDTANHMSDMADAILAIYGDLALPKGMQASDMKRT---RLMQLKPPKSADGKEGTVKAEYLTKSYDVSGAEAYK 336 (501) T ss_pred HHHHHHHHHHHHHHHhcCceeeeecCccCCcccchhhhhhc---CceeecccccccCCCCCcceeeeeccCCHHHHHHHH Confidence 77777777777777777776666543221 22222222211 000011111112233445555555545555566777 Q ss_pred HHHHHHHHHHhccchHhhccc-cccccccHH----------HHHHHHHHHHHHHHHHHHHHHHHhhhcchhhccceeeec Q lcl|Aclame:pro 278 QLNREEVCGVYDIAPPIVHIL-DRATFSNIS----------AQMRAFYRDTMAIPIARIQSAMDKYVGQYWVRKNRMKFD 346 (518) Q Consensus 278 ~~~~~~Ia~~fgVpp~~lg~~-~~~~~s~~e----------~~~~~~~~~~l~P~~~~ie~~ln~~l~~~~~~~~~~~fd 346 (518) +...+.|+..-++|..-.+.. ++.+....+ ......+...|.-.+..+...++..-.........+++. T Consensus 337 ~~l~~~I~~~s~~p~~~~~~~~~n~Sg~Al~~~~~~l~~ka~~~~~~~~~~l~~~~~li~~~~~~~~~~~~~d~~~i~v~ 416 (501) T protein:vir:27 337 TRLNRDIHIFTNIPDMSDTNFSGNTSGEALKYKLFGLDQDRVDTQSQFTQGLKRRYRLAARIGSLVNEFKDFDESLLKIT 416 (501) T ss_pred HHHHHHHHHHhCCcccCccccccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccceEE Confidence 888889999999987544322 221111111 111122333333333333322221111011112235566 Q ss_pred hhhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHHhCCCCCCccCceeeecccccccccccccCCCCCCCCCCCCcccCCC Q lcl|Aclame:pro 347 IDDVIQPDWEAKSESTQKMVNSGVATPNEGREIMGLPRSDDPKADELYANSALQPLGATPDGAVEGEEAPAPKRPASTPV 426 (518) Q Consensus 347 ~~~l~~~d~~~~~~~~~~~~~~g~~T~NE~R~~~g~~pi~~~~gD~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 426 (518) +...+..|..+.++.+.++ .|+++..-+.+.+++ +++|... + .-+.............+...+. . T Consensus 417 f~~~~p~n~~e~ad~~~kl--~g~iS~et~l~~l~~--v~D~~~E-~------eri~~E~~e~~~~~~~~~~~~~----~ 481 (501) T protein:vir:27 417 FTPNLPKSLNEQVSILTGL--GGQVSQETALSLSGL--VESPNEE-L------DKINKEVSEIDFKGYSNDFNEH----V 481 (501) T ss_pred eCCCCCcCHHHHHHHHHHH--hccCcHHHHHHhCCC--CCCHHHH-H------HHHHHHHHhhhHhhhcCccccc----c Confidence 6677888999999998887 478888777777644 3322111 0 0000000000000000000000 0 Q ss_pred CCccCCccccccccChhhhc Q lcl|Aclame:pro 427 ASLDQSPPASVPGLSPTNSD 446 (518) Q Consensus 427 ~~~~~~~~~~~~~~~~~~~~ 446 (518) ....+..++..+++..+..+ T Consensus 482 ~~~~d~~~~~~~d~~e~~~~ 501 (501) T protein:vir:27 482 GKYTDEVKETHTDDFERAYE 501 (501) T ss_pred ccccCCCCCCccccccccCC Confidence 00000000000000000000 No 162 >protein:vir:7987 Length: 456 # NCBI annotation: gp3 # Family: family:all:5096 # MgeID: mge:151 # MgeName: Che8 # Cross-refs: genbank:acc:NP_817341;genbank:gi:29565769;genbank:GeneID:1258964 Probab=98.78 E-value=8.3e-09 Score=64.90 Aligned_cols=388 Identities=10% Similarity=0.036 Sum_probs=172.1 Q ss_pred CCCCCCCCCccccccccchhhhhhhccCcc---CCcccCccchhhHHH--HhhhHHHHHHHHHHHHhhccCceEEEEecC Q lcl|Aclame:pro 1 MLLANGQTLSAPAMAELSPQMQDSYYYAPA---VGMQLERQFSLYGGI--YKNQPWVRTVIAKRAQALARLPVKCMFTSG 75 (518) Q Consensus 1 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~--~~~~~~v~~~v~~ia~~ia~lp~~v~~~~~ 75 (518) +|.. ......+ .-..+...+.+... .+..... .+... ...+.+...+|+..+..+-.-|+.+...+ T Consensus 12 ~l~~-~~~~~~~----r~~~l~~Yy~g~~~i~~~~~~~~~---~~~~~~~~~~~n~~~~ivd~~~~~l~~~g~~~~~~~- 82 (456) T protein:vir:79 12 VLTK-RIDDGMS----RVRLLARYSNGDAPLPELTRNTSA---AWRSFQREARTNWGLMVRDSVADRIIPNGITVGGSA- 82 (456) T ss_pred HHHH-HHHHHHH----HHHHHHHHHhccCChhhcCcccCh---hhchhhhhhhcchHHHHHHHHHhhhccCCeecCCCC- Confidence 1111 1100110 00111111211110 1111111 11111 11235778899999988888888753211 Q ss_pred CceeeecchHHHHHhhccCccCCHHHHHHHHHHHHHHcCCeeEEeeeCCCCceeeeeeeCCcceEEEeccCcce-E---- Q lcl|Aclame:pro 76 DTETEEHDTGYAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQKNKSGTPEKLMPMHPSRVAIKRNSRTGR-Y---- 150 (518) Q Consensus 76 ~~~~~~~~~~~~~l~~~PN~~~t~~~f~~~~~~~~ll~G~~~~~i~~~~~G~~~~l~~l~p~~v~~~~~~~~~~-~---- 150 (518) +. .....+..++.+ | ....+...+..+++.+|.+|..+..+.+|.+ .+..++|..+.+.+++.... + T Consensus 83 d~---~~~~~~~~~~~~-n---~~d~~~~~~~~~a~~~G~a~~~~~~~edg~~-~i~~~~p~~~~~i~d~~~~~~~~~~~ 154 (456) T protein:vir:79 83 DS---DLALRARRIWRD-N---RMDSVCKQWVKYGLDFGESYLTCWRRDDGTA-TITADSPETMVVSVDPLQPWRIRSAM 154 (456) T ss_pred Cc---cHHHHHHHHHHh-c---ChhHHHHHHHHHHhhcCeeEEEEeeCCCCce-EEEEeccceeEEEEcCCCCCceEEEE Confidence 11 111223444433 2 2345567788999999999998888888876 57888899888887653221 1 Q ss_pred EEEeeccCCC-------CceeEE-----------------------EeeeeeEEeecCCC---CcccccchHHHHHHHHH Q lcl|Aclame:pro 151 EYYFQAGAGV-------GTQLVS-----------------------FADDEVVPIRFFNP---DGLERGLSLMESLKSTI 197 (518) Q Consensus 151 ~~~~~~~~~~-------~~~~~~-----------------------~~~~~vih~~~~~~---~~~~~G~s~~~~~~~~i 197 (518) .|+....... ...... .+..++-|+-...| .....|+|.++.....+ T Consensus 155 ~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pvv~~~N~~~~gd~e~v~~li 234 (456) T protein:vir:79 155 RWWRDLDAESDFAIVWSGDGWQKFARPCFVQSSSRRRLVTRISDSWVPVGDAVVTGSPPPVVVYQNPDGMGEVEPHIDII 234 (456) T ss_pred EEEEecCCceeEEEEEcCCceEEEEEEEEeeccccceeeeccCCceeecccccCCCCceeEEEecCCCCCchhhhhHHHH Confidence 1110000000 000000 00000111000000 01124777777766666 Q ss_pred HHHHHHHHHHHHHHHccCCcceeeeeCC---cCCHHHHH--HHHHHHHHHhcCccccccceeccCCcccccccCChhhHH Q lcl|Aclame:pro 198 FSEDSSRNATAAMWKNAGRPNLVLRHEK---RLSPEAQQ--RLREQFDRAHAGSSNTGKTMVVEEGMEPIPLQLTAVEMQ 272 (518) Q Consensus 198 ~~~~~~~~~~~~~~~ng~~p~gil~~~~---~~~~e~~~--~~~~~~~~~~~g~~n~g~~~vl~~g~~~~~~~~~~~d~q 272 (518) +....+.--........+.|.-++.-.. ...++.-. .....|.. ..+.+..++++.++..+..++- .. T Consensus 235 D~~~~~~s~~~~~~~~~a~~~~~~~G~~~~~~~~d~~g~~i~~~~~~~~------~~~~~~~~~~~~~~~q~~~~~~-~~ 307 (456) T protein:vir:79 235 NRINRAELQLLSTMAIQAFRQRALKSSEHRLPKVDENGNAIDYASIFEA------APGALWELPPGVDIWESQTNDF-TP 307 (456) T ss_pred HHHHHHHHHHHHHHHHHhhHHHHHhcCCcccccccccccccchhhhhhh------hccccccCCCCcceeeecccCh-HH Confidence 5554443333333333333433332110 00111111 11122222 1234566778887766554322 23 Q ss_pred HHHHHHHHHHHHHHHhccchHhhccccccccccHHHHHHHHHHHHHHHHHHHHHHH----HHhhh---cchhh--cccee Q lcl|Aclame:pro 273 FIEARQLNREEVCGVYDIAPPIVHILDRATFSNISAQMRAFYRDTMAIPIARIQSA----MDKYV---GQYWV--RKNRM 343 (518) Q Consensus 273 ~~e~~~~~~~~Ia~~fgVpp~~lg~~~~~~~s~~e~~~~~~~~~~l~P~~~~ie~~----ln~~l---~~~~~--~~~~~ 343 (518) +.+.++..+..|+..-++|++.+|.... +- +.+ ...+....+.-.+...+.. |.+.+ +...+ ....+ T Consensus 308 ~~~~l~~~i~~i~~~t~~p~~~~~~~~~-N~-Sg~--Al~~~~~~l~~k~~~~~~~f~~~l~~~~~l~~~~~g~~~~~~i 383 (456) T protein:vir:79 308 MLSAIKEHIRQLSSATKTPLPMLMPDSA-NQ-SAE--GAHNIEKGFLFKCEDRLSIAKIGLEAILVKALQIEGESVEDTV 383 (456) T ss_pred HHHHHHHHHHHHHhhcCCChhHhccccc-Cc-HHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccccc Confidence 7888899999999999999999985321 11 111 1111111222222222222 21111 10011 11234 Q ss_pred eechhhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHHhCCCCCCccCceeeecccccccccccccCCCCCCCCCCCCccc Q lcl|Aclame:pro 344 KFDIDDVIQPDWEAKSESTQKMVNSGVATPNEGREIMGLPRSDDPKADELYANSALQPLGATPDGAVEGEEAPAPKRPAS 423 (518) Q Consensus 344 ~fd~~~l~~~d~~~~~~~~~~~~~~g~~T~NE~R~~~g~~pi~~~~gD~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~ 423 (518) ++.+.+....+..+.++.+.+++..|+++..-+++.+|+.+-+-+..+ +........+ ..+++.. T Consensus 384 ~v~w~~~~~~s~~~~ada~~kl~~~G~~~~~~~~~~lg~~~~~i~~~e-------~~r~~~e~~~--------~~~~~~~ 448 (456) T protein:vir:79 384 DVSFESPDRVTLGEKYSAASLAKAAGESWASIRRNILNYNADQIKQDD-------LDRAREQITL--------FAGNPVQ 448 (456) T ss_pred eEEeCCCCCcCHHHHHHHHHHHHhcCCChHHHHHhcCCCCHHHHHHHH-------HHHHHHHHHH--------HhhhHhh Confidence 555556677888999999999999999998888888888653211000 0000000000 0000110 Q ss_pred CCCCCccC Q lcl|Aclame:pro 424 TPVASLDQ 431 (518) Q Consensus 424 ~~~~~~~~ 431 (518) .+..+.-. T Consensus 449 ~~~~~~~~ 456 (456) T protein:vir:79 449 RPQEDGSR 456 (456) T ss_pred cCCCCCCC Confidence 00000000 No 163 >protein:vir:99072 Length: 479 # NCBI annotation: gp27 # Family: family:all:524 # MgeID: mge:1671 # MgeName: Wildcat # Cross-refs: genbank:acc:YP_655892;genbank:gi:109521464;genbank:GeneID:4158037 Probab=98.78 E-value=4.4e-08 Score=60.93 Aligned_cols=412 Identities=10% Similarity=0.048 Sum_probs=174.9 Q ss_pred CCCCCCCCCccccccc-c-ch----------hh---hhhhccCccCCcccCccchhhHHH---HhhhHHHHHHHHHHHHh Q lcl|Aclame:pro 1 MLLANGQTLSAPAMAE-L-SP----------QM---QDSYYYAPAVGMQLERQFSLYGGI---YKNQPWVRTVIAKRAQA 62 (518) Q Consensus 1 ~~f~~~~~~~~~~~~~-~-~~----------~~---~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~v~~~v~~ia~~ 62 (518) |+=-..+......... + .. .+ ...+.+.................. ...+.+...+|+.++.. T Consensus 1 ~~~~p~~~l~~~~~~~~~~~~l~~~~~~~~~r~~~~~~YY~g~~~i~~~~~~~~~~~~~~~~~~~~~n~~~~iVd~~~~~ 80 (479) T protein:vir:99 1 MIDLPDEDLSSEGLAKYLETKVFPKMNTECERLDDFEAWTKNGQEVPDLATRHKNKEREVLQQLSRKPWMGLMVNSFAQQ 80 (479) T ss_pred CccCCcccCChhHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCcccccccccCChhHHHHHHHhhcCcHHHHHHHHHhh Confidence 6655544333221110 0 00 00 011111111000000000000111 11235666777777765 Q ss_pred hccCceEEEEecCCceeeecchHHHHHhhccCccCCHHHHHHHHHHHHHHcCCeeEEeee-----CCCCceeeeeeeCCc Q lcl|Aclame:pro 63 LARLPVKCMFTSGDTETEEHDTGYAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQK-----NKSGTPEKLMPMHPS 137 (518) Q Consensus 63 ia~lp~~v~~~~~~~~~~~~~~~~~~l~~~PN~~~t~~~f~~~~~~~~ll~G~~~~~i~~-----~~~G~~~~l~~l~p~ 137 (518) +--..|.+ .++ . ....+..++.. |. .......+..+++.+|.+|.++.. +..|. ..+..++|. T Consensus 81 l~~~gf~~---~d~-~---~~~~~~~i~~~-N~---~d~~~~~~~~~a~~~G~af~~v~~~~~~~d~~g~-~~i~~~~p~ 148 (479) T protein:vir:99 81 LIVDGYRK---TGT-N---ENAKGWDTWRL-NQ---MDKQQFWLNRAVLTFGYAFIKVTSGISPLDGTTV-ARIKCIDPR 148 (479) T ss_pred cccccccC---CCc-h---hhHHHHHHHHh-cC---hhHHHHHHHHHHhhcCceEEEEecCCCCcCCCCc-eEEEEechh Confidence 53333321 111 1 12233444433 32 234556778899999999987753 23343 346777888 Q ss_pred ceEEEeccCcce--EEEEeeccCC-----------------CCc------eeEEEeeeeeEEeecCCCCcccccchHHHH Q lcl|Aclame:pro 138 RVAIKRNSRTGR--YEYYFQAGAG-----------------VGT------QLVSFADDEVVPIRFFNPDGLERGLSLMES 192 (518) Q Consensus 138 ~v~~~~~~~~~~--~~~~~~~~~~-----------------~~~------~~~~~~~~~vih~~~~~~~~~~~G~s~~~~ 192 (518) .+.+.+++.... ..|.+..... .+. ....+..-.|++|.+.... ..+|.|.+.. T Consensus 149 ~~~~iydd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~g~vPvv~f~n~~~~-~~~g~sd~e~ 227 (479) T protein:vir:99 149 DAFAIWEDPYWDEWPKYLLERQPNGQYWWWTEEDYSIFEFKQGKFIYRETVSHDYGHIPFVRYVNVMDL-RGVCYGDVEP 227 (479) T ss_pred heEEEecCCcccceeeEEEeecCceeEEEEecceEEEEEecCCceeeccccccCCCCcceEEeecCCCc-CcCCcchhHH Confidence 888776543221 1222111110 000 1111233346777755432 2468998888 Q ss_pred HHHHHHHHHHHHHHHHHHHHccCCcceeeeeCCcCCHHHHHHHHHHHHHHhcCcccccccee-ccCCcccccccCChhhH Q lcl|Aclame:pro 193 LKSTIFSEDSSRNATAAMWKNAGRPNLVLRHEKRLSPEAQQRLREQFDRAHAGSSNTGKTMV-VEEGMEPIPLQLTAVEM 271 (518) Q Consensus 193 ~~~~i~~~~~~~~~~~~~~~ng~~p~gil~~~~~~~~e~~~~~~~~~~~~~~g~~n~g~~~v-l~~g~~~~~~~~~~~d~ 271 (518) ....++.......-..+.+.-.+.|..++.--........+ ...|.- ..++++. .+++.++..+.... -. T Consensus 228 v~~liDa~~~~~s~~~~~~~~~a~p~~~i~G~~~~~~~~~~--~~~~~~------~~~~i~~~~~~~~~~~q~~~~~-~~ 298 (479) T protein:vir:99 228 LVTVAKAIDKTGLDILLVQHHQSFQIRWATGLMLPEGANAD--QEKMRF------AQESMLISQNEKASFGAIPAAP-LD 298 (479) T ss_pred HHHHHHHHHHHHHHHHHHHHHhhchhhhhcCCCcccccccc--hhcccc------ccccceeecCCCceEEEecccc-hH Confidence 87777777766665566666666776555421111111110 011111 1123333 34556665554222 12 Q ss_pred HHHHHHHHHHHHHHHHhccchHhhccccccccccHHHHHHHHHHHHHHHHHHHHHH----HHHhh------hcch--hhc Q lcl|Aclame:pro 272 QFIEARQLNREEVCGVYDIAPPIVHILDRATFSNISAQMRAFYRDTMAIPIARIQS----AMDKY------VGQY--WVR 339 (518) Q Consensus 272 q~~e~~~~~~~~Ia~~fgVpp~~lg~~~~~~~s~~e~~~~~~~~~~l~P~~~~ie~----~ln~~------l~~~--~~~ 339 (518) .+.+.++..+..|+.+=++|++.+|..++++. + ...+....+.-.+...+. .|.+. +... ... T Consensus 299 ~~~~~l~~~i~~i~~~t~~p~~~~g~~~n~Sg---~--Al~~~~~~l~~ka~~~~~~f~~al~~~~~l~~~~~~~~~~~~ 373 (479) T protein:vir:99 299 GLLNAYKESLLEFLALAQLPPHIAGQIVNVAA---D--ALAAGTRQTMQKLFEKQATWKASHNQTMRLVNKIEGRTEEAT 373 (479) T ss_pred HHHHHHHHHHHHHhccCCCCHHHcccccchHH---H--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccc Confidence 36677777788899888999999986443221 1 111222222222222111 11111 1111 112 Q ss_pred cceeeechhhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHH-hCCCCCCccCceeeeccc----cccc-ccccccCCCCC Q lcl|Aclame:pro 340 KNRMKFDIDDVIQPDWEAKSESTQKMVNSGVATPNEGREIM-GLPRSDDPKADELYANSA----LQPL-GATPDGAVEGE 413 (518) Q Consensus 340 ~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~T~NE~R~~~-g~~pi~~~~gD~~~~~~n----~~~~-~~~~~~~~~~~ 413 (518) .+.+++.+.+....+..+.++.+.+++.+|+++...+.+++ |+.+-+ -+....-.. ...+ .....+....+ T Consensus 374 ~~~i~~~w~~~~~~s~~~~ad~~~kl~~ag~is~et~l~~l~gv~~~~---~e~~~~~~~~~~~~~~~~~~~~~~~~~~~ 450 (479) T protein:vir:99 374 DLDFTITWQDVTIQSLAQFADAWAKMVESLKIPAEGVWDMIPNLDQST---VNGWKEIYDREGDFGKYMRKLQNGPDPAE 450 (479) T ss_pred ceeeeEEecCCCCCCHHHHHHHHHHHHhcCCCCHHHHHHhcCCCCHHH---HHHHHHHHHHHHHHHHHHHHHhcccCccc Confidence 23455555566677888899999999999999888777776 665321 111100000 0000 00000000000 Q ss_pred CCCCCCCcccCCCCCccCCccccccccChhhhcchhH Q lcl|Aclame:pro 414 EAPAPKRPASTPVASLDQSPPASVPGLSPTNSDRSTD 450 (518) Q Consensus 414 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 450 (518) +.+. . .+..+.++. ......++.-.++.. T Consensus 451 ~~~~----~-~~~~~~~~~---~~~~~~~~~~~~~~~ 479 (479) T protein:vir:99 451 QRGG----P-NGATNMQQA---NNKTGEPASLNKSGA 479 (479) T ss_pred ccCC----C-CCCCCCCCC---CCCCcchhccCCCCC Confidence 0000 0 000000000 000001111111111 No 164 >protein:vir:4782 Length: 522 # NCBI annotation: putative minor capsid protein 1 # Family: family:all:898 # MgeID: mge:104 # MgeName: MM1 # Cross-refs: genbank:acc:NP_150162;swissprot:trembl:q94m49;genbank:gi:26553451;uniprot:Q94M49;genbank:GeneID:955983 Probab=98.77 E-value=5.4e-08 Score=60.41 Aligned_cols=405 Identities=11% Similarity=0.003 Sum_probs=181.0 Q ss_pred CCCCCCCCC--cc--cc-ccccchhhh---hhhccCccCCcccCccchhhHHHHhhhHHHHHHHHHHHHhhccCceEEEE Q lcl|Aclame:pro 1 MLLANGQTL--SA--PA-MAELSPQMQ---DSYYYAPAVGMQLERQFSLYGGIYKNQPWVRTVIAKRAQALARLPVKCMF 72 (518) Q Consensus 1 ~~f~~~~~~--~~--~~-~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~v~~ia~~ia~lp~~v~~ 72 (518) -|+++.-.. .. ++ .......+. ..|.+.+..-......................+++..|+-+..=|..+.- T Consensus 17 ~~~~~~~~~i~~~~~i~~~~~~~~~i~~~~~~y~g~~~~~~~~~~~~~~~~~~~~slnl~~~i~~~~A~lv~~e~~~i~v 96 (522) T protein:vir:47 17 YMQTSNLNSILEHPKIAVTQEEYDRIKRNLVYYQSKWDDVQYKNTDGDIKSRPMNHLPIARTASKKIASLVYNEQATITT 96 (522) T ss_pred HhhcccchhccccCCCCCCHHHHHHHHHHHHHhcCCcccccccccCcchhcccceecchHHHHHHHHhhhhcCCcceeec Confidence 123332110 00 00 000000110 11111110000000000001111122244455666777666654444321 Q ss_pred ecCCceeeecchHHHHHhhccCccCCHHHHHHHHHHHHHHcCCeeEEeeeCCCCceeeeeeeCCcceEEEeccCcc---- Q lcl|Aclame:pro 73 TSGDTETEEHDTGYAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQKNKSGTPEKLMPMHPSRVAIKRNSRTG---- 148 (518) Q Consensus 73 ~~~~~~~~~~~~~~~~l~~~PN~~~t~~~f~~~~~~~~ll~G~~~~~i~~~~~G~~~~l~~l~p~~v~~~~~~~~~---- 148 (518) . +......+.+--..-.+....+..+...+..|.+++.+..+. |. +.+-.++++.+.+.....++ T Consensus 97 ~---------d~~~~~~l~~~l~~n~f~~~~~~~~e~a~a~G~~a~k~~~d~-~~-~~i~~v~ad~~~P~~~~~~~~~e~ 165 (522) T protein:vir:47 97 K---------NEILQKFLDDMLTNDRFNKNFERYLESCLALGGLAMRPYIDG-DK-VRVAFIQAPVFFPLESNTQDVSSA 165 (522) T ss_pred C---------ChHHHHHHHHHHhhcchHHHHHHHHHHhhccCCEEEEEEEcC-Cc-eEEEEEcCCceEEEEEcCCceEEE Confidence 1 122222222211223345555666777778888888877764 33 34445555555543221111 Q ss_pred -------------eEEEEe-----------------------------ecc-C-CCCceeEEE----------------- Q lcl|Aclame:pro 149 -------------RYEYYF-----------------------------QAG-A-GVGTQLVSF----------------- 167 (518) Q Consensus 149 -------------~~~~~~-----------------------------~~~-~-~~~~~~~~~----------------- 167 (518) ..+|.. +.. . ...|..+.+ T Consensus 166 a~~~~~~~~~~~~~~~yt~lE~he~~~~~~~~~~~~~~~~~~~I~n~ly~~~~~~~lG~~v~l~~~~e~~~l~~~~~~~~ 245 (522) T protein:vir:47 166 AILTKTIKSEGRKNVYYTLVEFHEWVTADGQETGSTNDKKYYRITNELYRSDVNDVLGQRVNLSELDKYKNLEPVTVFEN 245 (522) T ss_pred EEEEEEEeecccceeEEEEEEEeeecccccccccccccCCceEEEEEEeecCCCcccCccccccccccccCCCCceEeCC Confidence 111110 000 0 000111100 Q ss_pred -eeeeeEEeecCCCC----cccccchHHHHHHHHHHHHHHHHHHHHHHHHccCCccee----eeeCCcC-CHHHHHHHHH Q lcl|Aclame:pro 168 -ADDEVVPIRFFNPD----GLERGLSLMESLKSTIFSEDSSRNATAAMWKNAGRPNLV----LRHEKRL-SPEAQQRLRE 237 (518) Q Consensus 168 -~~~~vih~~~~~~~----~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~p~gi----l~~~~~~-~~e~~~~~~~ 237 (518) ...-+.||+.+.++ +.++|+|.+..+...+......-.....-|+.|-..-.| +...... +.+.. ... T Consensus 246 ~~~Plf~y~~~~~~N~~~~~splG~S~~~~~~~~id~lD~~~s~~~~e~~~g~~~i~v~~~~l~~~~~~~~g~~~--~~~ 323 (522) T protein:vir:47 246 LSRPLFTYLKTPGMNNKDINSPLGLSIFDNAKTTIDFINRSYDEFMWEVRMGQRRVIVPEHLTQRQYQRPDGTID--FRP 323 (522) T ss_pred CCcceEEEecCCcccccccCCCcCCchhhhhHHHHHHHHHHHHHHHHHHHhccceeecchHHhccCCCCCCcccc--ccc Confidence 11113466655433 345799999999999988887777777777766543222 2221111 10000 000 Q ss_pred HH---HHHhcCccccccceeccCCcccccccCChhhHHHHHHHHHHHHHHHHHhccchHhhccccccccccHHHH----- Q lcl|Aclame:pro 238 QF---DRAHAGSSNTGKTMVVEEGMEPIPLQLTAVEMQFIEARQLNREEVCGVYDIAPPIVHILDRATFSNISAQ----- 309 (518) Q Consensus 238 ~~---~~~~~g~~n~g~~~vl~~g~~~~~~~~~~~d~q~~e~~~~~~~~Ia~~fgVpp~~lg~~~~~~~s~~e~~----- 309 (518) .| ...|.+.+ .-..++-+++.++..-.+-++.+..+...+.|+...|+++..+|..+++. .+..+. T Consensus 324 ~fd~~~~~f~~~~-----~~~~~~~~i~~~~~~ir~e~~~~~~~~~l~~i~~~~gls~~tf~~~~~~~-kTAtEi~s~~~ 397 (522) T protein:vir:47 324 RFDVEQNVYMQIG-----GSSMDAGGITDLTSPIRANDYILAISEGLKLFEMQIGVSSGMFTFDGQGM-KTATEIVSENS 397 (522) T ss_pred ccCcccceEeecC-----CCCCCCCcceeeccccChHHHHHHHHHHHHHHHHHhCCCccccCcccccc-ccHHHHHHHHH Confidence 11 11111110 00123345666777778889999999999999999999999998765432 233322 Q ss_pred --------HHHHHHHHHHHHHHHHHHHHHhh-hcc-hhhccceeeechhhhhccCHHHHHHHHHHHHhCCCcCHHHHHHH Q lcl|Aclame:pro 310 --------MRAFYRDTMAIPIARIQSAMDKY-VGQ-YWVRKNRMKFDIDDVIQPDWEAKSESTQKMVNSGVATPNEGREI 379 (518) Q Consensus 310 --------~~~~~~~~l~P~~~~ie~~ln~~-l~~-~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~T~NE~R~~ 379 (518) ....++.+|.-++..|.+..+.. ++. .....+.+.|++++-+..|.++.++...+++.+|+|+.-+++.+ T Consensus 398 ~~~~t~~~~~~~~~~al~~lv~~i~~l~~~~~~~~~~~~~~~~i~v~f~D~i~~D~~~~~~~~~~~v~aG~~s~e~~i~~ 477 (522) T protein:vir:47 398 DTYQMRSSIVALVEQSIKELCVSMCELGKAVGVYSGEIPELDDISVNLDDGVFTDRHAELDYWAKMVAAGFSTKKRAIGK 477 (522) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccCCCCCcceeEEEcCCCCCCCHHHHHHHHHHHHhcCCCCHHHHHHh Confidence 23344444444444444333211 111 12234567788888889999999999999999999999998766 Q ss_pred HhCCCCCCccCceeeecccccccccccccCCCCCCCCCCCCcccCCCCCccCCcccccc Q lcl|Aclame:pro 380 MGLPRSDDPKADELYANSALQPLGATPDGAVEGEEAPAPKRPASTPVASLDQSPPASVP 438 (518) Q Consensus 380 ~g~~pi~~~~gD~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 438 (518) + ..++++...+.+.. +.. +... ..+ . ...--+..++++....+.+ T Consensus 478 ~--~g~~eeea~~el~r-----i~~--E~~~-~~~--~--~~~~~~~~~~~~~~~d~~~ 522 (522) T protein:vir:47 478 T--LNISGVEAEKELNA-----INS--ELLP-MND--A--ELAIYGMHDQNEEKADDKG 522 (522) T ss_pred c--CCCChHHHHHHHHH-----HHH--hhcc-CCC--C--CCCCCCCCCcccccCCCCC Confidence 4 22343333222111 100 0000 000 0 0000000011111111100 No 165 >protein:vir:94742 Length: 409 # NCBI annotation: putative portal protein # Family: family:all:524 # MgeID: mge:1529 # MgeName: phi LC3 # Cross-refs: genbank:acc:NP_996701;genbank:gi:45597416;genbank:GeneID:2767966 Probab=98.74 E-value=6.8e-08 Score=59.86 Aligned_cols=348 Identities=11% Similarity=0.070 Sum_probs=157.8 Q ss_pred CCCCCCCCCccccccccchhhhhhhccCcc---CCcccCccchhhHHHH-hhhHHHHHHHHHHHHhhccCceEEEEecCC Q lcl|Aclame:pro 1 MLLANGQTLSAPAMAELSPQMQDSYYYAPA---VGMQLERQFSLYGGIY-KNQPWVRTVIAKRAQALARLPVKCMFTSGD 76 (518) Q Consensus 1 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~-~~~~~v~~~v~~ia~~ia~lp~~v~~~~~~ 76 (518) ++.++=... -......-..+...+.+... .+..+.. .....+ ....+..-+|+.++..+.=-.|. . T Consensus 4 ~~i~~L~~~-~~~~~~r~~~~~~yY~g~~~~~~~~~~~p~---~~~~~~~~v~nw~~~iVds~a~rl~~~Gf~---~--- 73 (409) T protein:vir:94 4 KGIGYLRFK-LSVHKRRAEMRYDQYAMKYVDRFKGITIPQ---ALSQQYRSILGWCAKGVDSLADRLVFREFE---N--- 73 (409) T ss_pred HHHHHHHHH-HHHHhHHHHHHHHHhcccCchhhcChhhhH---HHHHHHhhhcchhHHHHHHhHhhcccCccc---C--- Confidence 000000000 00000000001111111110 1111111 111111 12245666777766643322221 1 Q ss_pred ceeeecchHHHHHhhccCccCCHHHHHHHHHHHHHHcCCeeEEeeeCCCCceeeeeeeCCcceEEEeccCcceEEEEeec Q lcl|Aclame:pro 77 TETEEHDTGYAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQKNKSGTPEKLMPMHPSRVAIKRNSRTGRYEYYFQA 156 (518) Q Consensus 77 ~~~~~~~~~~~~l~~~PN~~~t~~~f~~~~~~~~ll~G~~~~~i~~~~~G~~~~l~~l~p~~v~~~~~~~~~~~~~~~~~ 156 (518) .+..++.++.+ |. .......+..+.+++|.+|+.+..+.+|.+ .+.+++|..+.+.++...+.+.+.+.. T Consensus 74 -----~d~~l~~i~~~-N~---ld~~~~~~~~~aliyG~sf~~v~~~~dg~~-~i~~~sp~~~~~i~D~~~~~~~~a~~~ 143 (409) T protein:vir:94 74 -----DDFTVNEIFEE-NN---PDIFFDSAVLSSLIASCSFTYISKGENDAV-RLQVIEAVNATGIIDPITGLLTEGYAV 143 (409) T ss_pred -----CchHHHHHHHh-cC---hhHHHHHHHHHHHHhcceeEEEecCCCCce-EEEEeccceEEEEEecCCCceeeeEEE Confidence 12223444432 32 234455677888999999999988888875 678889999998887755444332221 Q ss_pred c--CCCCce--eEEE----------------------eeeeeEEeecCCCCcccccchHH----HHHHHHHHHHHHHHHH Q lcl|Aclame:pro 157 G--AGVGTQ--LVSF----------------------ADDEVVPIRFFNPDGLERGLSLM----ESLKSTIFSEDSSRNA 206 (518) Q Consensus 157 ~--~~~~~~--~~~~----------------------~~~~vih~~~~~~~~~~~G~s~~----~~~~~~i~~~~~~~~~ 206 (518) . +..+.. ...+ ..-.|++|.+....+..+|.|.| ..+.+.+.....-... T Consensus 144 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~g~vPvV~f~n~~~~~~~~G~s~I~e~v~~l~da~~r~~~~~~~ 223 (409) T protein:vir:94 144 LERDENNNVVLEAHFLPDRTDYYYRDSRNNISIANPTGHPLLVPIIHRPDAVRPFGRSRITRSGMYWQSNAKRTLERADV 223 (409) T ss_pred EEecCCCceEEEEEEecCcEEEEEecCceeEeeeCCCCCcceEEeccccccccccCccccchhHHHHHHHHHHHHHHHHH Confidence 1 111110 0011 11225666654434556788855 3333333333333333 Q ss_pred HHHHHHccCCcceeee-eCCcCCHHHHHHHHHHHHHHhcCccccccceecc-----CCcccccccCChhhHHHHHHHHHH Q lcl|Aclame:pro 207 TAAMWKNAGRPNLVLR-HEKRLSPEAQQRLREQFDRAHAGSSNTGKTMVVE-----EGMEPIPLQLTAVEMQFIEARQLN 280 (518) Q Consensus 207 ~~~~~~ng~~p~gil~-~~~~~~~e~~~~~~~~~~~~~~g~~n~g~~~vl~-----~g~~~~~~~~~~~d~q~~e~~~~~ 280 (518) ...|| +.|.-++. .+.+ .+..+.++.... +++.++ .+.++.++....- ..|++.++.. T Consensus 224 ~~e~~---a~pqr~i~G~d~d--~~~~~~~~~~~~----------~i~~~~~d~dg~~~~v~q~~~~~l-~~~~~~l~~~ 287 (409) T protein:vir:94 224 TAEFY---SFPQKYVTGLSDD--AEPMETWKATVS----------SMLQFTKDEDGDKPTLGQFTQPSM-SPFTEQLRTA 287 (409) T ss_pred HHHHh---cChhheeEecCCC--CcccchhhhhHH----------HhhcCCCCCCCCCceEEecCCCCh-hHHHHHHHHH Confidence 33343 44443332 2221 122222322222 233332 2244444433222 1388999999 Q ss_pred HHHHHHHhccchHhhccccccccccHHHHH---HHHHHHHHHHHHHHHHHHHHhh------hcchh----hccceeeech Q lcl|Aclame:pro 281 REEVCGVYDIAPPIVHILDRATFSNISAQM---RAFYRDTMAIPIARIQSAMDKY------VGQYW----VRKNRMKFDI 347 (518) Q Consensus 281 ~~~Ia~~fgVpp~~lg~~~~~~~s~~e~~~---~~~~~~~l~P~~~~ie~~ln~~------l~~~~----~~~~~~~fd~ 347 (518) +..+|..-++|++.+|.... |-++.++.. ..+...+ .-..+.+.+.+.+. +.... .....+++.+ T Consensus 288 ~~~~a~~t~lP~~~lg~~~~-NpsSa~Al~a~~~~L~~~a-~~k~~~fg~~~~~~~rla~~i~~~~~~~~~~~~~~~v~W 365 (409) T protein:vir:94 288 AAGFAGETGLTLDDLGFVSD-NPSSVEAIKASHENLRLAG-RKAQRSLGAGLLNVAYLAACLRDDAPYLREQFRKTKPKW 365 (409) T ss_pred HHHHhhhcCCCHHHhccccC-chhHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhCCCCccccccccceEEe Confidence 99999999999999997543 222222211 1111111 11111111122111 11100 1112334444 Q ss_pred hhhhccCH---HHHHHHHHHHHhCC--CcCHHHHHHHHhCCCCC Q lcl|Aclame:pro 348 DDVIQPDW---EAKSESTQKMVNSG--VATPNEGREIMGLPRSD 386 (518) Q Consensus 348 ~~l~~~d~---~~~~~~~~~~~~~g--~~T~NE~R~~~g~~pi~ 386 (518) ..+...+. .+.++.+.+++.+| +...+-+++++|+..-+ T Consensus 366 ~p~~~~~~~~~a~~aDa~~Kl~~ag~~~~~~~~~~~~lG~~~~d 409 (409) T protein:vir:94 366 EPLFEADASMLSLIGDGAIKLNQAIPEFINKDTIRDLTGIEGGE 409 (409) T ss_pred ccCCCcchHHHHHHHHHHHHHHHhcccccchhHHHHHcCCCCCC Confidence 44444443 45567788999988 55668899999998654 No 166 >protein:vir:80959 Length: 499 # NCBI annotation: gp3 # Family: family:all:898 # MgeID: mge:1886 # MgeName: A500 # Cross-refs: genbank:acc:YP_001468389;genbank:gi:157324963;genbank:GeneID:5601394 Probab=98.72 E-value=8.6e-08 Score=59.33 Aligned_cols=392 Identities=10% Similarity=0.009 Sum_probs=181.2 Q ss_pred CCCCCCCCCccccccc----------cchhhhhhhccCccCCcccCccch----hhHHHHhhhHHHHHHHHHHHHhhccC Q lcl|Aclame:pro 1 MLLANGQTLSAPAMAE----------LSPQMQDSYYYAPAVGMQLERQFS----LYGGIYKNQPWVRTVIAKRAQALARL 66 (518) Q Consensus 1 ~~f~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~v~~~v~~ia~~ia~l 66 (518) +||.++.-.+.-.... ..-| ...+.+.. .....+... ..............+++..|+-+..- T Consensus 15 ~~~~~~~~~~~~~~~~i~~~~~~~~~i~~~-~~~Y~g~~--~~~~~~~~~~~~~~~~~~~~s~n~~~~iv~~~a~~l~~e 91 (499) T protein:vir:80 15 RMGLLKSLKDVTDHKKVNANDEDYKYIDMW-KRLYQGNY--AEWHNLNYEHNGNPVNRRQLSMNLPKVTAKYMSKLLFNE 91 (499) T ss_pred HhccccchhhhhcCCCCcCCHHHHHHHHHH-HHHhcCCc--chhhccccccCCCccccceeecchHHHHHHHHHHhhhCC Confidence 4554433221110000 0111 11111110 000000000 00001112244556778888877776 Q ss_pred ceEEEEecCCceeeecchHHHHHhhccCccCCHHHHHHHHHHHHHHcCCeeEEeeeCCCCceeeeeeeCCcceEEEeccC Q lcl|Aclame:pro 67 PVKCMFTSGDTETEEHDTGYAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQKNKSGTPEKLMPMHPSRVAIKRNSR 146 (518) Q Consensus 67 p~~v~~~~~~~~~~~~~~~~~~l~~~PN~~~t~~~f~~~~~~~~ll~G~~~~~i~~~~~G~~~~l~~l~p~~v~~~~~~~ 146 (518) |..+.-. +......+.+-...-....-...++...+..|.+|+.+..+.+|.+ .+..++|..+-+...+. T Consensus 92 p~~i~~~---------d~~~~e~l~~~~~~n~f~~~~~~~~~~a~~~G~~~~~~~~D~~~~~-~i~~v~a~~~~Pi~~d~ 161 (499) T protein:vir:80 92 KVKINID---------DETAEEFVLNVLKTNGFTKNMERYIEYGEAMGGFVIKVYHDGNKNV-KVSFATADCMYPLSNDS 161 (499) T ss_pred cceEeeC---------CHHHHHHHHHHHhhccHHHHHHHHHHHHhhcCcEEEEEEECCCCcE-EEEEEcCCceEEEEecC Confidence 6665321 1222223332222333455556677788889999999999888764 46677777777654433 Q ss_pred cceE-------------EEE--------------eec-------cC-CCCceeEE----------------EeeeeeEEe Q lcl|Aclame:pro 147 TGRY-------------EYY--------------FQA-------GA-GVGTQLVS----------------FADDEVVPI 175 (518) Q Consensus 147 ~~~~-------------~~~--------------~~~-------~~-~~~~~~~~----------------~~~~~vih~ 175 (518) +... .|. |.. .. ...|..+. +....+.|| T Consensus 162 ~~~~~~~f~~~~~~~~~~y~~lE~h~~~~~~~~~y~I~n~~~~~~~~~~lG~~v~l~~~~~~~~~~~~~~~~~~p~f~~~ 241 (499) T protein:vir:80 162 ENVDECLIANSFHKNNKYYKLLEWNEWKGEKEEVYTVTTELYQSDDPNELGGKVSLKLLFNDIEPVVPLPSLTRPTFIYI 241 (499) T ss_pred CCeEEEEEEEEEeecCeEEEEEEEEEecccceeeEEEEEEEEeccCccccCcccchhhhccCcCCceeecCCCccceEee Confidence 3221 000 000 00 00011110 011124566 Q ss_pred ecCCCC----cccccchHHHHHHHHHHHHHHHHHHHHHHHHccCCcceee-----eeCCcCCHHHHHHHHHHHHHHhcCc Q lcl|Aclame:pro 176 RFFNPD----GLERGLSLMESLKSTIFSEDSSRNATAAMWKNAGRPNLVL-----RHEKRLSPEAQQRLREQFDRAHAGS 246 (518) Q Consensus 176 ~~~~~~----~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~p~gil-----~~~~~~~~e~~~~~~~~~~~~~~g~ 246 (518) +.+-++ +.++|+|.+..+...++..........+-|+.| ....++ ....+.+.+.. ..|.. . T Consensus 242 ~~~~~N~~~~~splG~S~~~~~~~lid~lD~~~s~~~~e~~~~-~~~i~v~~~~l~~~~~~~g~~~----~~~~~----~ 312 (499) T protein:vir:80 242 KPNIANNKNLTSPLGISVYANALDTLKTLDLMFDSYYQEFKLG-KKKVLVPSSFVKTAVNLDGSTT----QYFDS----T 312 (499) T ss_pred cCCccccccCCCccCCchHhhHHHHHHHHHHHHHHHHHHHHhc-ccceecchhhhhccCCCCCCcc----cCCCc----c Confidence 554322 335699999999999998887777777778764 333332 11111110000 00100 0 Q ss_pred cccccce-ec--cCCcccccccCChhhHHHHHHHHHHHHHHHHHhccchHhhccccccccccHHHH---H---------- Q lcl|Aclame:pro 247 SNTGKTM-VV--EEGMEPIPLQLTAVEMQFIEARQLNREEVCGVYDIAPPIVHILDRATFSNISAQ---M---------- 310 (518) Q Consensus 247 ~n~g~~~-vl--~~g~~~~~~~~~~~d~q~~e~~~~~~~~Ia~~fgVpp~~lg~~~~~~~s~~e~~---~---------- 310 (518) ....+.. .. +++..++.++.....-++.+..+...++|....|+++..+|...++.. +..+. . T Consensus 313 ~~~~~~~~~~~~~~~~~i~~~~~~ir~e~~~~~l~~~l~~i~~~~g~s~~~fg~~~~g~~-TAtei~s~~~~l~~~~~~~ 391 (499) T protein:vir:80 313 DEAFFLYQGEQDDNGKAIKDISVEIRSTEFIESINAMLRIYAMQVGLSAGTFTFDENGLK-TATEVVSEKSETYQTKNSH 391 (499) T ss_pred cceeeEeeccCCCCcCceeEecCcCChHHHHHHHHHHHHHHHHhcCCChhhcCCCcccch-hHHHHHHHHHHHHHHHHHH Confidence 0001111 11 122345666666666778888888899999999999999997654432 22221 1 Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhcch--hhccceeeechhhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHH-hCCCCCC Q lcl|Aclame:pro 311 RAFYRDTMAIPIARIQSAMDKYVGQY--WVRKNRMKFDIDDVIQPDWEAKSESTQKMVNSGVATPNEGREIM-GLPRSDD 387 (518) Q Consensus 311 ~~~~~~~l~P~~~~ie~~ln~~l~~~--~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~T~NE~R~~~-g~~pi~~ 387 (518) ...++.+|..++..|-...+...... ......+.|++++-+..|.++.++...+++.+|+|+.-.++... |.+ + T Consensus 392 ~~~~~~~l~~l~~~il~~~~~~~~~~~~~~~~~~v~v~f~d~i~~d~~~~~~~~~~~~~~Gi~S~et~l~~~~~~~---d 468 (499) T protein:vir:80 392 SQLIEQGIKEMIVSILEVGKLIKAYDGDTVELDTITVDFDDSIAQDEDTTINRYTTAKNQGMIPLKIALQRAWNIT---E 468 (499) T ss_pred HHHHHHHHHHHHHHHHHHHHHhccccCCCCCccceEEEeCCCCCCCHHHHHHHHHHHHHcCCCCHHHHHhhcCCCC---h Confidence 11122222222222222111111111 11234567777787888999999999999999999998887654 432 2 Q ss_pred ccCceeeecccccccccccccCCCCCCCCCCCCcccCCCCCccCCc Q lcl|Aclame:pro 388 PKADELYANSALQPLGATPDGAVEGEEAPAPKRPASTPVASLDQSP 433 (518) Q Consensus 388 ~~gD~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 433 (518) +..++.+.. +.. .. ....+.+ ...+-.+++. T Consensus 469 ~ea~~el~~-----i~~---E~-----~~~~~~~--d~~g~~ge~e 499 (499) T protein:vir:80 469 AEADEWAEM-----LAK---EK-----QAEIPNN--DMTGIFGEEE 499 (499) T ss_pred HHHHHHHHH-----HHH---Hh-----hcCCCCC--CccccCCCCC Confidence 223222110 000 00 0000000 0000011111 No 167 >protein:vir:2500 Length: 501 # NCBI annotation: putative portal gp5 # Family: family:all:524 # MgeID: mge:53 # MgeName: TM4 # Cross-refs: genbank:acc:NP_569741;genbank:gi:18496891;genbank:GeneID:932330 Probab=98.69 E-value=8.7e-08 Score=59.28 Aligned_cols=394 Identities=10% Similarity=0.015 Sum_probs=163.7 Q ss_pred CCCCCCCCCccccccccchhhhhhhccCc---cCCcccCccchhhHHHH--hhhHHHHHHHHHHHHhhccCceEEEEecC Q lcl|Aclame:pro 1 MLLANGQTLSAPAMAELSPQMQDSYYYAP---AVGMQLERQFSLYGGIY--KNQPWVRTVIAKRAQALARLPVKCMFTSG 75 (518) Q Consensus 1 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~--~~~~~v~~~v~~ia~~ia~lp~~v~~~~~ 75 (518) -|+..-. ...+- -..+...+-+.. ..+..... .+.... ..+.+...+|+.++..+--..|.+ .+ T Consensus 34 ~l~~~~~-~~~~r----l~~l~~YY~G~~~~~~~~~~~~~---~~~~~~~~~v~n~~~~ivd~~a~~l~~~gf~~---~d 102 (501) T protein:vir:25 34 DMWRLHI-SERQW----LDRIYEYTKGLRGRPEVPEGASD---EVKELAKLSVKNVLSLVRDSFAQNLSVVGYRN---AL 102 (501) T ss_pred HHHHHHH-HHHHH----HHHHHHHHhcCCCchhccccCCh---hhhhhHhhhhcChHHHHHHHHHhhhcccceec---CC Confidence 0111000 00000 011111121111 01111111 111111 122466667777776553333322 11 Q ss_pred CceeeecchHHHHHhhccCccCCHHHHHHHHHHHHHHcCCeeEEeeeCCCCceeeeeeeCCcceEEEecc-Ccc-eEEEE Q lcl|Aclame:pro 76 DTETEEHDTGYAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQKNKSGTPEKLMPMHPSRVAIKRNS-RTG-RYEYY 153 (518) Q Consensus 76 ~~~~~~~~~~~~~l~~~PN~~~t~~~f~~~~~~~~ll~G~~~~~i~~~~~G~~~~l~~l~p~~v~~~~~~-~~~-~~~~~ 153 (518) + . ....+..++.. |. .......+..+++.+|.+|+.+..+..|. .+..++|..|.+++++ ... ...+. T Consensus 103 ~-~---~~~~l~~i~~~-N~---~d~~~~~~~~~a~i~G~ay~~v~~de~~~--~i~~~sp~~~~~iy~D~~~~~~~~~a 172 (501) T protein:vir:25 103 A-K---ENDPAWEMWQR-NR---MDARQAEVHRPALTYGASYVTVTPTDEGP--VFRTRSPRQILAVYADPSVDAWPQYA 172 (501) T ss_pred c-c---chHHHHHHHHh-cC---hhHHHHHHHHHHhhcCceEEEEecCCCCC--eEEEeccccEEEEEecCCCCcceeEE Confidence 1 1 11223334332 33 23444567888999999999988887774 3556788888876532 211 11111 Q ss_pred --e--eccC-CCCce----------------------------------------------eEEEeeeeeEEeecCCCCc Q lcl|Aclame:pro 154 --F--QAGA-GVGTQ----------------------------------------------LVSFADDEVVPIRFFNPDG 182 (518) Q Consensus 154 --~--~~~~-~~~~~----------------------------------------------~~~~~~~~vih~~~~~~~~ 182 (518) + .... ...+. ...|..-.|+||.+.... T Consensus 173 i~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vPiv~f~N~~~~- 251 (501) T protein:vir:25 173 LETWVAQKDAKPHRRGVLYDDTYMYELDLGEVVLGDAGGGQATQQPVNVREVTDVIEHGATFEGKPVCPVVRFVNGRDA- 251 (501) T ss_pred EEEEeeccccCcceeEEEecCeeEEEEecCceeeeeccccccccccccccccccccccccccCCccceeeEeccCcccc- Confidence 0 0000 00000 001122245555553322 Q ss_pred ccccchHHHHHHHHHHHHHHHHHHHHHHHHccCCcceeeeeCCcCCHHHHHHHHHHHHHHhcCccccccceeccC-Cccc Q lcl|Aclame:pro 183 LERGLSLMESLKSTIFSEDSSRNATAAMWKNAGRPNLVLRHEKRLSPEAQQRLREQFDRAHAGSSNTGKTMVVEE-GMEP 261 (518) Q Consensus 183 ~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~p~gil~~~~~~~~e~~~~~~~~~~~~~~g~~n~g~~~vl~~-g~~~ 261 (518) ..+|.|.++.....++......-......+-.+.|.-++.- .+.++.+. |+. ..++++++++ +.++ T Consensus 252 ~~~g~sdie~v~~l~Da~~~~~s~~~~~~e~~a~p~~~i~G---~~~~~~~~----~~~------~~~~i~~~~~~~~~~ 318 (501) T protein:vir:25 252 DDMIVGEVAPLILLQQAINSVNFDRLIVSRFGANPQRVISG---WTGSKAEV----LKA------SALRVWTFEDPEVKA 318 (501) T ss_pred CccccchhhhhHHHHHHHHHHHHHHHHHHHhhccHHHHHhC---CCCCccch----hhh------cccceeccCCCCceE Confidence 23578877666655555555444444444444455433321 12222221 211 1245666653 5555 Q ss_pred ccccCChhhHH-HHHHHHHHHHHHHHHhccchHhhccccccccccHHHHHHHHHHHHHHHHHHHHHHH----HHhhh--- Q lcl|Aclame:pro 262 IPLQLTAVEMQ-FIEARQLNREEVCGVYDIAPPIVHILDRATFSNISAQMRAFYRDTMAIPIARIQSA----MDKYV--- 333 (518) Q Consensus 262 ~~~~~~~~d~q-~~e~~~~~~~~Ia~~fgVpp~~lg~~~~~~~s~~e~~~~~~~~~~l~P~~~~ie~~----ln~~l--- 333 (518) ..+. ..+++ |++.++..+..|+..-++|+..+|.... |.......+....|.-.+...+.. |.+.+ T Consensus 319 ~q~~--~~~~~~~~~~l~~~i~~i~~~s~~P~~~~~~~~~----N~Sg~Al~~~~~~l~~ka~~k~~~f~~~l~~~~rl~ 392 (501) T protein:vir:25 319 QAFP--PASVEPYNLILEEMLQHVAMVAQISPAQVTGKMI----NVSAEALAAAEANQQRKLAAKRESFGESWEQLLRLA 392 (501) T ss_pred EEec--ccChHHHHHHHHHHHHHHHhhcCCChhhhccccC----ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Confidence 4443 33344 7888999999999999999999985432 111222222222222222222222 22111 Q ss_pred ---cc--hhhccceeeechhhhhccCHHHHHHHHHHHHhCCCcCHHHHH-HHHhCCCCCCccCceeeecccccc-ccccc Q lcl|Aclame:pro 334 ---GQ--YWVRKNRMKFDIDDVIQPDWEAKSESTQKMVNSGVATPNEGR-EIMGLPRSDDPKADELYANSALQP-LGATP 406 (518) Q Consensus 334 ---~~--~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~T~NE~R-~~~g~~pi~~~~gD~~~~~~n~~~-~~~~~ 406 (518) .. .......+++.+.+....+..+.++.+.++++.|+ +.-.+. .+.|+.+-+-....+........+ ++... T Consensus 393 ~~~~~~~~~~~~~~i~v~w~~~~~~s~~~~ada~~kl~~~gi-s~et~~~~~~g~~~~~ie~~~~~~~e~~~~~~~~~~~ 471 (501) T protein:vir:25 393 AEMDDDPDTAADSGAEVLWRDTEARSFGAVVDGITKLASAGI-PIEHLLSMVPGMTQQTIQAIKDSLRGGEVKSLVDKLL 471 (501) T ss_pred HHHhCCCccccceeeeEEecCCCCCCHHHHHHHHHHHHhcCC-CHHHHHHHcCCCCHHHHHHHHHHHHHHhHHHHHHHhh Confidence 01 11122356667778888899999999999998885 444333 334665421000000000000000 00000 Q ss_pred ccCCCCCCCCCCCCcccCCCCCccCCcccccccc Q lcl|Aclame:pro 407 DGAVEGEEAPAPKRPASTPVASLDQSPPASVPGL 440 (518) Q Consensus 407 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 440 (518) .+...+. .+.+++....+....+. +...+. T Consensus 472 ~~~~~~~-~~~~~~~~~~~~~~~~~---~~~~g~ 501 (501) T protein:vir:25 472 SNEPAPV-PPPPPQAAAQALNEGGV---NGNGGA 501 (501) T ss_pred ccCcCCC-CCCCCCCCccccccccC---CCCCCC Confidence 0000000 00000100000000000 000000 No 168 >protein:vir:78537 Length: 480 # NCBI annotation: gp11 # Family: family:all:524 # MgeID: mge:1853 # MgeName: U2 # Cross-refs: genbank:acc:YP_001491582;genbank:gi:157786405;genbank:GeneID:5625689 Probab=98.66 E-value=1.3e-07 Score=58.27 Aligned_cols=403 Identities=13% Similarity=0.117 Sum_probs=168.6 Q ss_pred ccccchhhhhhhc-----------------cCc---cCCcccCccchhhHHHHhhhHHHHHHHHHHHHhhccCceEEEEe Q lcl|Aclame:pro 14 MAELSPQMQDSYY-----------------YAP---AVGMQLERQFSLYGGIYKNQPWVRTVIAKRAQALARLPVKCMFT 73 (518) Q Consensus 14 ~~~~~~~~~~~~~-----------------~~~---~~~~~~~~~~~~~~~~~~~~~~v~~~v~~ia~~ia~lp~~v~~~ 73 (518) +.+-..++..... +-. ..+..+.. ..+..-....+...+|+..+..+--.+|.+ T Consensus 1 ~~t~~d~i~~L~~~~~~~~~r~~~~~~Yy~G~~~i~~~~~~~~~---~~~~~~~~~n~~~~ivd~~~~~l~~~g~~~--- 74 (480) T protein:vir:78 1 MTTYHEHVERLQGLLARDLPNLLEAEAYRNGTRRLKTIGIGAPP---ELAYLDVQPGWVATYLRTLSDRLDIEGFRI--- 74 (480) T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchhcccccch---hhhhhhhhcchHHHHHHHHHhhhccCceec--- Confidence 2222222222211 100 00111110 011111223455667777776654344432 Q ss_pred cCCceeeecchHHHHHhhccCccCCHHHHHHHHHHHHHHcCCeeEEeeeC------CCCceeeeeeeCCcceEEEeccCc Q lcl|Aclame:pro 74 SGDTETEEHDTGYAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQKN------KSGTPEKLMPMHPSRVAIKRNSRT 147 (518) Q Consensus 74 ~~~~~~~~~~~~~~~l~~~PN~~~t~~~f~~~~~~~~ll~G~~~~~i~~~------~~G~~~~l~~l~p~~v~~~~~~~~ 147 (518) .++. .....+..++.+ | ........+..+++.+|.+|..+.+. .+|.+ .+.+++|..+.+.++... T Consensus 75 ~~d~---~~~~~l~~i~~~-N---~~~~~~~~~~~~a~~~G~ay~~v~~~~~~~~d~~~~~-~i~~~~p~~~~~i~D~~~ 146 (480) T protein:vir:78 75 SEDS---EGLEELWNWWQA-N---DLDEESVLGHDDSLTFGRAYITVSHPDVESGDPAGIP-LIRVESPLYMYAELDPRN 146 (480) T ss_pred CCCc---hhHHHHHHHHHh-c---CHHHHHHHHHHHHhhcCceEEEeecCccccCCCCCee-EEEEEcccceEEEEcCCC Confidence 1111 112334444432 2 23456677889999999999887542 34443 477888888888876532 Q ss_pred -ceE----EEEeeccCCC------------------------------CceeEEEeeeeeEEeecCCCCcccccchHHHH Q lcl|Aclame:pro 148 -GRY----EYYFQAGAGV------------------------------GTQLVSFADDEVVPIRFFNPDGLERGLSLMES 192 (518) Q Consensus 148 -~~~----~~~~~~~~~~------------------------------~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~ 192 (518) +.+ .|++...... ......+..-.|+||.+....+..+|.|.+.. T Consensus 147 ~~~~~~~i~~~~~~d~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~vPvv~f~n~~~~~~~~G~sdi~~ 226 (480) T protein:vir:78 147 TRRVTRAVRLYTTRDDVAVPDRATLYLPDETVPLRRNGGLNDQWVVDGDVIKHGLGVVPVVPLTNDPRLGNRYGRSEISP 226 (480) T ss_pred ccceEEEEEEEEeecCCcceEEEEEEeCCeEEEEEecCCCcccccccccccccCCCCcceEEeecccccCCccCccchhH Confidence 111 1110000000 00001122334677776555555678886653 Q ss_pred -HHHHHHHHHHHHHHHHHHHHccCCcceeeeeCCcCCHHHHHHHHHHHHHHhcCccccccceecc-CCcccccccCChhh Q lcl|Aclame:pro 193 -LKSTIFSEDSSRNATAAMWKNAGRPNLVLRHEKRLSPEAQQRLREQFDRAHAGSSNTGKTMVVE-EGMEPIPLQLTAVE 270 (518) Q Consensus 193 -~~~~i~~~~~~~~~~~~~~~ng~~p~gil~~~~~~~~e~~~~~~~~~~~~~~g~~n~g~~~vl~-~g~~~~~~~~~~~d 270 (518) +...++....+..-..+...-.+.|.-++.- ....+...+.-...|... .+.+..++ ++.++..+.....+ T Consensus 227 ~i~~l~Da~~~~~s~~~~~~~~~a~p~~~i~G-~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~ 299 (480) T protein:vir:78 227 ELRKVTDAASRTLMNLQSASQILGTPLRVISG-VTTDELTNDGENTTLDIY------YGRILTLASEAAKISEFKAAELR 299 (480) T ss_pred HHHHHHHHHHHHHHHHHHHHHhhcchhhhhhC-CCccccccccccchhhhh------hhhhccCCCCCceEEecCccCHH Confidence 3344444443333333334434455444431 111111001001112111 12344444 34556554443222 Q ss_pred HHHHHHHHHHHHHHHHHhccchHhhccccccccccHHHHHHHHHHHHHHHHHHHHHHH----HHhh------hcchh--h Q lcl|Aclame:pro 271 MQFIEARQLNREEVCGVYDIAPPIVHILDRATFSNISAQMRAFYRDTMAIPIARIQSA----MDKY------VGQYW--V 338 (518) Q Consensus 271 ~q~~e~~~~~~~~Ia~~fgVpp~~lg~~~~~~~s~~e~~~~~~~~~~l~P~~~~ie~~----ln~~------l~~~~--~ 338 (518) .+++..+..+..|+..-++|++.+|.... +.++.++ ..+....|.-.+...+.. |.+. +.... . T Consensus 300 -~~~~~l~~~i~~~~~~~~~p~~~fg~~~~-n~~Sg~A--l~~~~~~l~~k~~~~~~~f~~~l~~~~rl~~~~~~~~~~~ 375 (480) T protein:vir:78 300 -NFAEEMEVFRKEAASITGLPPQYLSSSSE-NPASAEA--IIATDSRIVKMAERKGRIFGGAWERAMRIAMQIMGREVTE 375 (480) T ss_pred -HHHHHHHHHHHHHhcccCCCHHHhccccC-chhHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCccc Confidence 36777888889999999999999985332 2122111 112122222222222221 1111 11111 1 Q ss_pred ccceeeechhhhhccCHHHHHHHHHHHHhCC--CcCHHHHHHHHhCCCCCCccCceeeecccccccccccccCCCCCCCC Q lcl|Aclame:pro 339 RKNRMKFDIDDVIQPDWEAKSESTQKMVNSG--VATPNEGREIMGLPRSDDPKADELYANSALQPLGATPDGAVEGEEAP 416 (518) Q Consensus 339 ~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g--~~T~NE~R~~~g~~pi~~~~gD~~~~~~n~~~~~~~~~~~~~~~~~~ 416 (518) ....+++.+.+....+..+.++.+.+++.+| +++..-+++++|+.+-+.....+..-.....+++..... T Consensus 376 ~~~~i~v~w~~~~~~s~~~~ad~~~kl~~~g~~~~s~et~~~~lg~~~d~~~e~~~~~~~~~~~~~~~~~~~-------- 447 (480) T protein:vir:78 376 EYTRLETVWRDPSTPTVAAKADAVSKLYANGQGPIPKEQARIDLGYTATQREQMRDWDKQETEDMIDTLYST-------- 447 (480) T ss_pred cceeeeEEecCCCCCCHHHHHHHHHHHHHhcccCCCHHHHHhcCCCCHhHHHHHHHHHHHHHHHHHHHhhcc-------- Confidence 2234566666666778888899899888866 567666788888764321111111101111111111000 Q ss_pred CCCCcccCCCCCccCCccccccccChhhhcchhHH Q lcl|Aclame:pro 417 APKRPASTPVASLDQSPPASVPGLSPTNSDRSTDS 451 (518) Q Consensus 417 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 451 (518) ..+++..++.+..++.+ ...+..+...++...+ T Consensus 448 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~ 480 (480) T protein:vir:78 448 TKAQADATPKPTVTETK--TETQTSPSGFNRTKTR 480 (480) T ss_pred ccCCCccccCCCCCCCC--CccCCCcccCCCcCCC Confidence 00000011111111100 0111111222222211 No 169 >protein:vir:8184 Length: 474 # NCBI annotation: gp4 # Family: family:all:524 # MgeID: mge:153 # MgeName: Che9d # Cross-refs: genbank:acc:NP_817977;genbank:gi:29566411;genbank:GeneID:2700965 Probab=98.63 E-value=1.7e-07 Score=57.64 Aligned_cols=396 Identities=12% Similarity=0.078 Sum_probs=169.5 Q ss_pred CCCCCCCCCcccccccc-chhhhhh-----------------hccCc---cCCcccCccchhhHHHHhhhHHHHHHHHHH Q lcl|Aclame:pro 1 MLLANGQTLSAPAMAEL-SPQMQDS-----------------YYYAP---AVGMQLERQFSLYGGIYKNQPWVRTVIAKR 59 (518) Q Consensus 1 ~~f~~~~~~~~~~~~~~-~~~~~~~-----------------~~~~~---~~~~~~~~~~~~~~~~~~~~~~v~~~v~~i 59 (518) || +-+....|.+... ..++... +.+.. ..+..+ ...++.......+...||+.+ T Consensus 1 ~~--~~~~~~~~gl~~~~~~~~~~L~~~~~~~~~~~~~~~~Yy~G~~~~~~~~~~~---p~~~r~~~~v~nw~~~~Vd~~ 75 (474) T protein:vir:81 1 MI--QQQTVRIPSLSNDENALINGLLAQIENLRWKNLLRTSYYENKRTIQYVGTLI---PPQYFNLGLVLGWTGKAVDAL 75 (474) T ss_pred Cc--CCCcCcCCCCChhHHHHHHHHHHHHHHHhhHHHHHHHHhccCCChhhccccc---cHHHHHHHhhcChHHHHHHHH Confidence 33 2222222221111 0111111 11110 011111 111222223446667788888 Q ss_pred HHhhccCceEEEEecCCceeeecchHHHHHhhccCccCCHHHHHHHHHHHHHHcCCeeEEeeeCCCCce-eeeeeeCCcc Q lcl|Aclame:pro 60 AQALARLPVKCMFTSGDTETEEHDTGYAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQKNKSGTP-EKLMPMHPSR 138 (518) Q Consensus 60 a~~ia~lp~~v~~~~~~~~~~~~~~~~~~l~~~PN~~~t~~~f~~~~~~~~ll~G~~~~~i~~~~~G~~-~~l~~l~p~~ 138 (518) ++.+.--.|.+ . ++. ..+..++.++. -|.. ......+..+.+++|++|+.+....+|.+ ..+.+++|.+ T Consensus 76 a~rl~~~Gf~~---~-d~~--~~~~~l~~iw~-~N~l---d~~~~~~~~~al~~G~sf~~V~~~~d~~~~~~i~~~sp~~ 145 (474) T protein:vir:81 76 ARRCNLEGFVW---P-DGD--LDSLGGTEVVD-DNHL---LSEIDSAIVAAMQHGPAFLINTVGEDDEPEALIHVKDASE 145 (474) T ss_pred HhhhcccceEC---C-CCC--ccchHHHHHHH-hcCh---hHHHHHHHHHHHhhCceeEEEecCCCCCceeEEEEeccce Confidence 77655555542 1 111 11222344443 2222 34455667789999999999887777754 4577889999 Q ss_pred eEEEeccCcceEEEEeec--cCCCCc--eeEEEeee-------------------------eeEEeecCCCCcccccchH Q lcl|Aclame:pro 139 VAIKRNSRTGRYEYYFQA--GAGVGT--QLVSFADD-------------------------EVVPIRFFNPDGLERGLSL 189 (518) Q Consensus 139 v~~~~~~~~~~~~~~~~~--~~~~~~--~~~~~~~~-------------------------~vih~~~~~~~~~~~G~s~ 189 (518) +.+.+|+..+.+.+.+.. .+..+. ....|.++ .|++|.+...-...+|.|. T Consensus 146 ~~~~~D~~~~~~~~al~~~~~~~~g~~~~~~ly~~~~~~~~~~~~~~~~w~~~~~~~~~gvPvV~~~n~~~~~~~~G~s~ 225 (474) T protein:vir:81 146 ATGEWNRRRRGLNNLLSIIDKDKEGKVLSLALYLDNETVTAQRDKATLKWQVDRDEHVYGVPAQVLPYKPAPKRPFGQSR 225 (474) T ss_pred EEEEEeCCCCcceeeeEEEEEcCCCcEEEEEEEeCCcEEEEEEcCccceeeeccCCCCCCcceEEecccccccCcCCccc Confidence 988877654432222111 111100 00011111 2445444332333467775 Q ss_pred H----HHHHHHHHHHHHHHHHHHHHHHccCCcceeee-eCC-cCCH---HHHHHHHHHHHHHhcCccccccceeccCCcc Q lcl|Aclame:pro 190 M----ESLKSTIFSEDSSRNATAAMWKNAGRPNLVLR-HEK-RLSP---EAQQRLREQFDRAHAGSSNTGKTMVVEEGME 260 (518) Q Consensus 190 ~----~~~~~~i~~~~~~~~~~~~~~~ng~~p~gil~-~~~-~~~~---e~~~~~~~~~~~~~~g~~n~g~~~vl~~g~~ 260 (518) + ..+.+.+.....-......|| +.|.-++. ... ...+ +....++........-..+...-.....+.+ T Consensus 226 i~e~v~~l~da~~r~~~~~~~~~e~~---a~pqr~i~G~~~~~~~d~d~~~~~~~~~~~~~i~~~~~d~d~~~~~~~~~~ 302 (474) T protein:vir:81 226 ITKPMMGLQDAGVRELARREGHMDVF---SYPEFWLLGADESALKNADGTIKSVWEARLGRIKGLPDDADADIPQLARAD 302 (474) T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHh---cchhheeecCChhhcccccccccchhhhhHHHHhcCCCccccccccccccc Confidence 4 333333333333333333333 34433332 211 1111 1122333333222211111111111112345 Q ss_pred cccccCChhhHH-HHHHHHHHHHHHHHHhccchHhhccccccccccHHHHHHHHHHHH--HHHHHHHHHHHHHhhh---- Q lcl|Aclame:pro 261 PIPLQLTAVEMQ-FIEARQLNREEVCGVYDIAPPIVHILDRATFSNISAQMRAFYRDT--MAIPIARIQSAMDKYV---- 333 (518) Q Consensus 261 ~~~~~~~~~d~q-~~e~~~~~~~~Ia~~fgVpp~~lg~~~~~~~s~~e~~~~~~~~~~--l~P~~~~ie~~ln~~l---- 333 (518) +-++... +++ |++.++..+..||..-++|++.+|+....|-++.+.........+ ..-..+.+...+.+.+ T Consensus 303 ~~q~~~a--~l~~~~~~l~~~~~~~a~~t~iP~~~lG~~~~~np~SaeAi~a~~~~l~~kae~k~~~fg~~l~~~~rla~ 380 (474) T protein:vir:81 303 VKQFPAA--SPDAHWSDINGLAKLFAREASLPDTAVAISGLSNPTSAESYDASQYELIAEAEGAVDDFTPALRKAFIRAL 380 (474) T ss_pred ccccCCC--ChhHHHHHHHHHHHHHHhhhCCCHHHhcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Confidence 5544432 333 788899999999999999999999765444444433322111111 1111122222222111 Q ss_pred --cch-----h-hccceeeechhhhhccCHHHHHHHHHHHHhCCC--cCHHHHHHHHhCCCCCCc-cCceeeeccccccc Q lcl|Aclame:pro 334 --GQY-----W-VRKNRMKFDIDDVIQPDWEAKSESTQKMVNSGV--ATPNEGREIMGLPRSDDP-KADELYANSALQPL 402 (518) Q Consensus 334 --~~~-----~-~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~--~T~NE~R~~~g~~pi~~~-~gD~~~~~~n~~~~ 402 (518) ... . ...+.+++.+.+....+..+.++.+.+++.+|. ....=+++++|+.+-+-. +-++.-......++ T Consensus 381 ~i~~~~~~~~~~~~~~~~~v~W~d~~~~s~a~~aDa~~Kl~~a~~~~~~~~~~~~~lg~t~~~i~~~~~~~~~~~~~~~~ 460 (474) T protein:vir:81 381 AMKNKVAIDEIPDEWKSIDAKWRDPRYLSKSAQADAGMKQLAAVPWLAETEVGLELIGLTPQQARRAMADKRRVQGRGTL 460 (474) T ss_pred HHhCCCCccccchhhccceeEecCCCccCHHHHHHHHHHHHhcccCCCcHHHHHhhcCCCHHHHHHHHHHHHHHhHHHHH Confidence 000 0 112344555666777888999999999999874 333446888888754210 00000000011111 Q ss_pred ccccccCCCCCCCCCCCC Q lcl|Aclame:pro 403 GATPDGAVEGEEAPAPKR 420 (518) Q Consensus 403 ~~~~~~~~~~~~~~~~~~ 420 (518) +....... +.... + T Consensus 461 ~~l~~~~~---~~~~a-q 474 (474) T protein:vir:81 461 QALIDRSN---NGATA-Q 474 (474) T ss_pred HHHHhcCC---CCCCC-C Confidence 11110000 00000 0 No 170 >protein:vir:1587 Length: 508 # NCBI annotation: minor capsid protein # Family: family:all:898 # MgeID: mge:32 # MgeName: phig1e # Cross-refs: genbank:acc:NP_695169;swissprot:trembl:o03928;genbank:gi:23455800;interpro:IPR006432;uniprot:O03928;genbank:GeneID:955566 Probab=98.60 E-value=2.2e-07 Score=57.12 Aligned_cols=392 Identities=10% Similarity=0.013 Sum_probs=178.0 Q ss_pred CCCCCCCCCcc---ccc------cc-cchhhhhhhccCcc-C-CcccCccchhhHHHHhhhHHHHHHHHHHHHhhccCce Q lcl|Aclame:pro 1 MLLANGQTLSA---PAM------AE-LSPQMQDSYYYAPA-V-GMQLERQFSLYGGIYKNQPWVRTVIAKRAQALARLPV 68 (518) Q Consensus 1 ~~f~~~~~~~~---~~~------~~-~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~v~~~v~~ia~~ia~lp~ 68 (518) +||..+.-... +.. .. ...|. ..|.+.+. . ........ .............+++..|+-+..=|. T Consensus 17 ~~~~~~~~~~~~~~~~i~~~~~~~~ri~~~~-~~y~g~~~~~~~~~~~~~~--~~~~~~sln~~~~i~~~~A~lv~~e~~ 93 (508) T protein:vir:15 17 ATGVTGSLSKITDDPRISIDPDEYVRIQTDL-DYYSDKLQYIHYQASDGIK--KKRLKNTINMAKTAARRIASVVFNEKA 93 (508) T ss_pred HhccccchHHhhcccccccCHHHHHHHHHHH-HHhcCCCcccccccCCCCc--cccceeecchHHHHHHHHHhhhhCCCc Confidence 23322211110 000 00 11111 11221110 0 00000000 001111223445667777777765555 Q ss_pred EEEEecCCceeeecchHHHHHhhccCccCCHHHHHHHHHHHHHHcCCeeEEeeeCCCCceeeeeeeCCcceEEEeccCcc Q lcl|Aclame:pro 69 KCMFTSGDTETEEHDTGYAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQKNKSGTPEKLMPMHPSRVAIKRNSRTG 148 (518) Q Consensus 69 ~v~~~~~~~~~~~~~~~~~~l~~~PN~~~t~~~f~~~~~~~~ll~G~~~~~i~~~~~G~~~~l~~l~p~~v~~~~~~~~~ 148 (518) .+.-.+++ ..+..+..++. .-.+..-.+..+.+.+..|.+++.+..+.++ +.+..++|..+.+.....++ T Consensus 94 ~i~v~~~~----~~~e~l~~il~----~n~f~~~~~~~~e~a~a~G~~~~k~~~d~~~--~~i~~v~ad~~~P~~~d~~~ 163 (508) T protein:vir:15 94 EIHVKDNN----EADKFLNDVLE----DNDFKNKFEEALEKGVALGGFAMRPYIDGNH--IKIAWVRADQFYPLQSNTND 163 (508) T ss_pred eEEeCCch----HHHHHHHHHHH----hccHHHHHHHHHHHHhhcCceEEEEEEeCCe--eEEEEEcCCeeEEEEEcCCC Confidence 44322211 11122223332 1223444455677888899999888776443 34555666665543222221 Q ss_pred e-----------------EEEE------------------eeccCC--CCceeEEE------------------eeeeeE Q lcl|Aclame:pro 149 R-----------------YEYY------------------FQAGAG--VGTQLVSF------------------ADDEVV 173 (518) Q Consensus 149 ~-----------------~~~~------------------~~~~~~--~~~~~~~~------------------~~~~vi 173 (518) . .+|. .+.... ..|..+.+ +...+. T Consensus 164 ~~~~af~~~~~~~~~~~~~~yt~lE~h~~~~~~~~~I~n~ly~~~~~~~lG~~v~l~~~~e~~~l~~~~~~~g~~~p~f~ 243 (508) T protein:vir:15 164 ISEAAIASRTQRTESNQTKYYTLLEFHQWQDNGSYQITNELYKSDSPDIVGNQVPLSTLPVYKELAPQVTISGLQRPLFA 243 (508) T ss_pred eEEEEEEEEEEeecCCCceEEEEEEEEEEecCcceEEEEEEEecCCchhcCcccchhhcccccCCCcceEecCCCcceeE Confidence 1 1111 000000 00111111 011234 Q ss_pred EeecCCCC----cccccchHHHHHHHHHHHHHHHHHHHHHHHHccCCcceeee---eCCcCCHHHHHHHHHHHHHHhcCc Q lcl|Aclame:pro 174 PIRFFNPD----GLERGLSLMESLKSTIFSEDSSRNATAAMWKNAGRPNLVLR---HEKRLSPEAQQRLREQFDRAHAGS 246 (518) Q Consensus 174 h~~~~~~~----~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~p~gil~---~~~~~~~e~~~~~~~~~~~~~~g~ 246 (518) ||+.+.++ +..+|+|.+..+...++..........+-|+. +.+..++. ++.+ ++... .|. .. T Consensus 244 y~~~~~~N~~~~~splG~S~~~~~~~lid~lD~~~s~~~~e~~~-~~~~i~v~~~~l~~d--~~~~~----~~~----~~ 312 (508) T protein:vir:15 244 YFKTPGANNINIESPLGLGVVDNAKHVLDDINDTHDQFIWEIRL-GQKHIAVQPGMLRFD--DEHKP----TFD----TE 312 (508) T ss_pred EecCCccccccCCCCcCCchHhhhHHHHHHHHHHHHHHHHHHHh-cccceeechHHhcCC--CCCcc----ccC----CC Confidence 55554333 24579999999999999988777777777864 44444431 1111 11000 010 11 Q ss_pred ccccccee--ccCCcccccccCChhhHHHHHHHHHHHHHHHHHhccchHhhccccccccccHHHH-------------HH Q lcl|Aclame:pro 247 SNTGKTMV--VEEGMEPIPLQLTAVEMQFIEARQLNREEVCGVYDIAPPIVHILDRATFSNISAQ-------------MR 311 (518) Q Consensus 247 ~n~g~~~v--l~~g~~~~~~~~~~~d~q~~e~~~~~~~~Ia~~fgVpp~~lg~~~~~~~s~~e~~-------------~~ 311 (518) .+....+- .++|..++.++..-.+-++.+..+...+.|....|++|..+|...++.. +..+. .. T Consensus 313 ~~~~~~~~~~~~~~~~i~~~~~~ir~e~~~~~~~~~l~~~~~~~gls~~~f~~~~~~~~-TAtei~s~~~~~~~t~~~~~ 391 (508) T protein:vir:15 313 QNVYVGVLSDDNNGLGVKDMTTPIRTVQYKDAIDHFIKEFEVQIGLSTGTFSYSNDGVK-TATEVVSNNSMTYQTRSSYL 391 (508) T ss_pred CeeEEeccCCCCCCCceeEeecccChHHHHHHHHHHHHHHHHHhCCCchhcccccCccc-cHHHHHHHHHHHHHHHHHHH Confidence 11111111 1234456667766678889999999999999999999999987654332 22221 11 Q ss_pred HHHHHHHHHHHHHHHHHHHhh-hcch---------hhccceeeechhhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHHh Q lcl|Aclame:pro 312 AFYRDTMAIPIARIQSAMDKY-VGQY---------WVRKNRMKFDIDDVIQPDWEAKSESTQKMVNSGVATPNEGREIMG 381 (518) Q Consensus 312 ~~~~~~l~P~~~~ie~~ln~~-l~~~---------~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~T~NE~R~~~g 381 (518) ..++.+|..++..|....+.. +... ....+.+.|++++-+..|.++.++...+++.+|+|+.-+++.+. T Consensus 392 ~~~~~al~~lv~~il~l~~~~~~~~~g~~~~~~~~~~~~~~v~v~f~D~i~~d~~~~~~~~~~~v~aGi~s~e~~i~~~- 470 (508) T protein:vir:15 392 TMVEKAIDELCQSIFELANAGALFDDGKPLFTLDSASQPLDIECHFDDGVFVNKDKQLEEDAKVLAIGALSKQTFLQRN- 470 (508) T ss_pred HHHHHHHHHHHHHHHHHHHHhccccccccccccccccCCcceEEEeCCCCCCCHHHHHHHHHHHHhcCCCCHHHHHHhc- Confidence 223333333333333222211 1110 01234566788888889999999999999999999999988654 Q ss_pred CCCCCCccCceeeecccccccccccccCCCCCCCCCCCCcccCCCCC-ccC Q lcl|Aclame:pro 382 LPRSDDPKADELYANSALQPLGATPDGAVEGEEAPAPKRPASTPVAS-LDQ 431 (518) Q Consensus 382 ~~pi~~~~gD~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 431 (518) +-++++..++.+... . .... ...+......+..+ .++ T Consensus 471 -~g~~deea~~el~ri-----~---~E~~----~~~~~~~~~~~~~g~~ge 508 (508) T protein:vir:15 471 -YGMTDEQAAEELAKI-----Q---SEAP----TDTFEGGRSAILNGGDGE 508 (508) T ss_pred -CCCChHHHHHHHHHH-----H---Hhcc----ccCccccccccCCCCCCC Confidence 223333333222110 0 0000 00000010111111 111 No 171 >protein:vir:78227 Length: 480 # NCBI annotation: gp11 # Family: family:all:524 # MgeID: mge:1849 # MgeName: Bethlehem # Cross-refs: genbank:acc:YP_001491663;genbank:gi:157786487;genbank:GeneID:5625705 Probab=98.60 E-value=2.2e-07 Score=57.12 Aligned_cols=403 Identities=13% Similarity=0.115 Sum_probs=165.1 Q ss_pred ccccchhhhhhh-----------------ccCc---cCCcccCccchhhHHHHhhhHHHHHHHHHHHHhhccCceEEEEe Q lcl|Aclame:pro 14 MAELSPQMQDSY-----------------YYAP---AVGMQLERQFSLYGGIYKNQPWVRTVIAKRAQALARLPVKCMFT 73 (518) Q Consensus 14 ~~~~~~~~~~~~-----------------~~~~---~~~~~~~~~~~~~~~~~~~~~~v~~~v~~ia~~ia~lp~~v~~~ 73 (518) +.+-..++.... .+.. ..+..+.. .....-....+...+|+..+..+-..+|.+ T Consensus 1 ~~t~~~~i~~L~~~~~~~~~r~~~l~~Yy~G~~~i~~~~~~~~~---~~~~~~~~~n~~~~ivd~~~~~l~~~g~~~--- 74 (480) T protein:vir:78 1 MTTYHEHVERLQGLLARDLPNLLEAEAYRNGTRRLKTIGIGAPP---ELAYLDVQPGWVATYLRTLSDRLDIEGFRI--- 74 (480) T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccccch---hHhhhhhhcchHHHHHHHHHhhhccCceec--- Confidence 222222222211 1100 00111111 011111223455667777776554334322 Q ss_pred cCCceeeecchHHHHHhhccCccCCHHHHHHHHHHHHHHcCCeeEEeeeC------CCCceeeeeeeCCcceEEEeccC- Q lcl|Aclame:pro 74 SGDTETEEHDTGYAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQKN------KSGTPEKLMPMHPSRVAIKRNSR- 146 (518) Q Consensus 74 ~~~~~~~~~~~~~~~l~~~PN~~~t~~~f~~~~~~~~ll~G~~~~~i~~~------~~G~~~~l~~l~p~~v~~~~~~~- 146 (518) .++. .....+..++.+ | ........+..+++.+|.+|..+.+. .+|.+ .+.+++|..+.+.++.. T Consensus 75 ~~d~---~~~~~l~~i~~~-N---~~d~~~~~~~~~a~~~G~ay~~v~~~~~~~~d~~g~~-~i~~~~p~~~~~~~D~~~ 146 (480) T protein:vir:78 75 SEDS---EGLEELWNWWQA-N---DLDEESVLGHDDSLTFGRSYITVSHPDVESGDPAGIP-LIRVESPLYMYAELDPRN 146 (480) T ss_pred CCCc---hhHHHHHHHHHh-c---CHHHHHHHHHHHHhhcCceEEEEecCccccCCCCCee-EEEEEcccceEEEEcCCC Confidence 1111 112233334332 2 23456677888999999999887542 34433 46778888888887642 Q ss_pred cceEEEE--e--eccCCCC---------c---------------------eeEEEeeeeeEEeecCCCCcccccchHHHH Q lcl|Aclame:pro 147 TGRYEYY--F--QAGAGVG---------T---------------------QLVSFADDEVVPIRFFNPDGLERGLSLMES 192 (518) Q Consensus 147 ~~~~~~~--~--~~~~~~~---------~---------------------~~~~~~~~~vih~~~~~~~~~~~G~s~~~~ 192 (518) .+.+.+. + ....... + ....++.-.|+||.+....+..+|.|.+.. T Consensus 147 ~~~~~~~i~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~vPvv~f~n~~~~~~~~G~s~i~~ 226 (480) T protein:vir:78 147 TRRVTRAVRLYTTRDDVAVPDRATLYLPDETVPLRRNGGLNDQWVVDGDVIKHGLGVVPVVPLTNDPRLGNRYGRSEISP 226 (480) T ss_pred ccceEEEEEEEEeecCCCceEEEEEEeCCeEEEEEecCCCccccccccccccCCCCCcceEEeecccccCCccCcccchh Confidence 1111110 0 0000000 0 001123334677775544455678887653 Q ss_pred -HHHHHHHHHHHHHHHHHHHHccCCcceeeeeCCcCCHHHHHHHHHHHHHHhcCccccccceecc-CCcccccccCChhh Q lcl|Aclame:pro 193 -LKSTIFSEDSSRNATAAMWKNAGRPNLVLRHEKRLSPEAQQRLREQFDRAHAGSSNTGKTMVVE-EGMEPIPLQLTAVE 270 (518) Q Consensus 193 -~~~~i~~~~~~~~~~~~~~~ng~~p~gil~~~~~~~~e~~~~~~~~~~~~~~g~~n~g~~~vl~-~g~~~~~~~~~~~d 270 (518) +...++.......-.....+-.+.|.-++. +....+...+.-...|... .+.+..++ ++.++..+..... T Consensus 227 ~v~~l~Da~~~~~s~~~~~~~~~a~p~~~i~-G~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~- 298 (480) T protein:vir:78 227 ELRKVTDAASRTLMNLQSASQILGTPLRVIS-GVTTDELTNDGENTTLDIY------YGRILTLASEAAKISEFKAAEL- 298 (480) T ss_pred hHHHHHHHHHHHHHHHHHHHHhhcchhhhhh-cCCccccccccccchhhhh------hhhhccCCCCCceEEecCccCH- Confidence 344444444333333344444445554443 1111111111111112211 12233443 3456655543322 Q ss_pred HHHHHHHHHHHHHHHHHhccchHhhccccccccccHHHHHHHHHHHHHHHHHHHHHH----HHHhh------hcch--hh Q lcl|Aclame:pro 271 MQFIEARQLNREEVCGVYDIAPPIVHILDRATFSNISAQMRAFYRDTMAIPIARIQS----AMDKY------VGQY--WV 338 (518) Q Consensus 271 ~q~~e~~~~~~~~Ia~~fgVpp~~lg~~~~~~~s~~e~~~~~~~~~~l~P~~~~ie~----~ln~~------l~~~--~~ 338 (518) ..+++..+..+..|+..=++|+..+|.... +.++.++. .+....|.-.+...+. .|.+. +... .. T Consensus 299 ~~~~~~l~~~i~~~~~~~~~p~~~~g~~~~-n~~Sg~Al--k~~~~~l~~ka~~~~~~f~~~l~~~~~l~~~~~g~~~~~ 375 (480) T protein:vir:78 299 RNFAEEMEVFRKEAASITGLPPQYLSSSSE-NPASAEAI--IATDSRIVKMAERKGRIFGGAWERAMRIAMQIMGREVTE 375 (480) T ss_pred HHHHHHHHHHHHHHhcccCCChHHhccccC-cchHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCccc Confidence 226777788888899999999999986432 21222221 1111222222222221 12111 1111 01 Q ss_pred ccceeeechhhhhccCHHHHHHHHHHHHhCC--CcCHHHHHHHHhCCCCCCccCceeeecccccccccccccCCCCCCCC Q lcl|Aclame:pro 339 RKNRMKFDIDDVIQPDWEAKSESTQKMVNSG--VATPNEGREIMGLPRSDDPKADELYANSALQPLGATPDGAVEGEEAP 416 (518) Q Consensus 339 ~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g--~~T~NE~R~~~g~~pi~~~~gD~~~~~~n~~~~~~~~~~~~~~~~~~ 416 (518) ....+++.+.+....+..+.++.+.+++.+| +++..-+++.+|+.+-+....++.--...-.+++...... . + T Consensus 376 ~~~~i~v~f~~~~~~s~~~~ad~~~kl~~~g~~~~s~et~~~~lg~~~d~~~~~~~~~~e~~~~~~~~~~~~~-~-~--- 450 (480) T protein:vir:78 376 EYTRLETVWRDPSTPTVAAKADAVSKLYANGQGPIPKEQARIDLGYTATQREQMRDWDKQETEDMIDTLYSTT-K-A--- 450 (480) T ss_pred cceeeeEEecCCCCCCHHHHHHHHHHHHHhccccCCHHHHHhcCCCCHhHHHHHHHHHHHHHHHHHHHhhccc-c-c--- Confidence 1233455555666678888888888888766 6677777888887643211111100000000111100000 0 0 Q ss_pred CCCCcccCCCCCccCCccccccccChhhhcchhHH Q lcl|Aclame:pro 417 APKRPASTPVASLDQSPPASVPGLSPTNSDRSTDS 451 (518) Q Consensus 417 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 451 (518) ++...+.++.++.+. ..+..+....+...+ T Consensus 451 ---~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 480 (480) T protein:vir:78 451 ---QADATPKPTVTETKT--ETQTSPSGFNRTKTR 480 (480) T ss_pred ---cCCCCCCCCCCCCCC--ccccccCCCCcccCC Confidence 000000011111000 011111111111111 No 172 >protein:vir:105889 Length: 474 # NCBI annotation: portal protein # Family: family:all:125 # MgeID: mge:1514 # MgeName: phiETA3 # Cross-refs: genbank:acc:YP_001004371;genbank:gi:122891826;genbank:GeneID:4712360 Probab=98.57 E-value=2.7e-07 Score=56.63 Aligned_cols=391 Identities=10% Similarity=0.046 Sum_probs=178.5 Q ss_pred CCCCCCCCCccccccc---------------cchhhhhhhcc-CccCCcccCccchhhHHHHhhhHHHHHHHHHHHHhhc Q lcl|Aclame:pro 1 MLLANGQTLSAPAMAE---------------LSPQMQDSYYY-APAVGMQLERQFSLYGGIYKNQPWVRTVIAKRAQALA 64 (518) Q Consensus 1 ~~f~~~~~~~~~~~~~---------------~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~v~~~v~~ia~~ia 64 (518) +|=..+. ..+.... ..+........ .+........ .. ..-..++....+|+..+.-+- T Consensus 23 ~i~~~~~--~~~r~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~---~~ki~~n~~~~ivd~~~~yl~ 96 (474) T protein:vir:10 23 LIESHKD--DRERMVNLYNRYKTHIDYVPIFKRRPIEEKEDFETGGNVRRLDV-SV---NNKLNNSFDSEIVDTRVGYLH 96 (474) T ss_pred HHHHhhh--hhHHHHHHHHHHhhhcchhhhhcchhhhhhhhhhhccccccccc-Cc---ccccccchHHHHHHhHhhhee Confidence 0000000 0000000 00000000000 0000000000 00 000124566777888888888 Q ss_pred cCceEEEEecCCceeeecchHHHHHhhccCccCCHHHHHHHHHHHHHHcCCeeEEeeeCCCCceeeeeeeCCcceEEEec Q lcl|Aclame:pro 65 RLPVKCMFTSGDTETEEHDTGYAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQKNKSGTPEKLMPMHPSRVAIKRN 144 (518) Q Consensus 65 ~lp~~v~~~~~~~~~~~~~~~~~~l~~~PN~~~t~~~f~~~~~~~~ll~G~~~~~i~~~~~G~~~~l~~l~p~~v~~~~~ 144 (518) +-|+.+.-..+.. .+..+..++.+-............+..+++.+|.+|.++..+.+|.+ .+..++|..+.++++ T Consensus 97 g~pv~~~~~~~~~----~~e~~~~~l~~~~~~n~~~~~~~~~~~~~~~~G~a~~~~~~d~~~~~-~~~~i~p~~~~~v~d 171 (474) T protein:vir:10 97 GVPVTYDLDENAE----KNEKLKKFITNFAIRNSVDDEDSEIGKMAAICGYGARLAYIDTNGDI-RIKNIDPYNVIFVGD 171 (474) T ss_pred ccceeEeeCCCCc----chHHHHHHHHHHHhhcCHhHHHHHHHHHHhhcCeEEEEEEeCCCCee-EEEEEcccceEEEEc Confidence 8888864322211 12222223333222234566677788899999999999888888864 577788888877776 Q ss_pred cCcceEEE--EeeccCCCCce------------------------------eEEEeeeeeEEeecCCCCcccccchHHHH Q lcl|Aclame:pro 145 SRTGRYEY--YFQAGAGVGTQ------------------------------LVSFADDEVVPIRFFNPDGLERGLSLMES 192 (518) Q Consensus 145 ~~~~~~~~--~~~~~~~~~~~------------------------------~~~~~~~~vih~~~~~~~~~~~G~s~~~~ 192 (518) ..+..... .+.......+. ...+..-.|++|++. ..|.|-+.. T Consensus 172 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~g~vPvv~~~n~-----~~g~sd~e~ 246 (474) T protein:vir:10 172 NILEPTYSLRYFYEKDDDNGTDYVYAEFYDNAYYYVFRGEGIDALQEVGRYEHLFDYNPLFGVPNN-----KEMIGDAEK 246 (474) T ss_pred CCCceEEEEEEEEEeeCCCceEEEEEEEEcCceEEEEeecCCCcccccccccCCCCccceEEecCC-----CCCCCchHH Confidence 54432211 01100000100 001111123343322 247777777 Q ss_pred HHHHHHHHHHHHHHHHHHHHccCCcceeeeeCCcCCHHHHHHHHHHHHHHhcCccccccceeccCCcccccccCChhhHH Q lcl|Aclame:pro 193 LKSTIFSEDSSRNATAAMWKNAGRPNLVLRHEKRLSPEAQQRLREQFDRAHAGSSNTGKTMVVEEGMEPIPLQLTAVEMQ 272 (518) Q Consensus 193 ~~~~i~~~~~~~~~~~~~~~ng~~p~gil~~~~~~~~e~~~~~~~~~~~~~~g~~n~g~~~vl~~g~~~~~~~~~~~d~q 272 (518) ....++....+..-..+.+...+.|-.+++- ...+++....++ ..+.+.+.+++.++..+........ T Consensus 247 v~~liDa~d~~~S~~~~~~~~~~~~~l~i~g-~~~~~~~~~~~~-----------~~~~i~~~~~~~~~~~l~~~~~~~~ 314 (474) T protein:vir:10 247 VIHLIDAYDLTMSDASSEISQTRLAYLVLRG-MGMSEEMIQETQ-----------KSGAFELFDKDMDVKYLTKDVNDTM 314 (474) T ss_pred HHHHHHHHHHHHHHHHHHHHHhhcchhhhcc-CCCCchhhhhhh-----------hcceeEecCCCCceeEEeccCCHHH Confidence 7777776666655566666666667655543 333433322211 1344555666666666665555566 Q ss_pred HHHHHHHHHHHHHHHhccchHhhccc-cccccccHH----------HHHHHHHHHHHHHHHHHHHHHHHhhhcchh-hcc Q lcl|Aclame:pro 273 FIEARQLNREEVCGVYDIAPPIVHIL-DRATFSNIS----------AQMRAFYRDTMAIPIARIQSAMDKYVGQYW-VRK 340 (518) Q Consensus 273 ~~e~~~~~~~~Ia~~fgVpp~~lg~~-~~~~~s~~e----------~~~~~~~~~~l~P~~~~ie~~ln~~l~~~~-~~~ 340 (518) +....+...+.|...-++|..-.+.. ++.+..... ......+..+++-.++.|...++..-.... ... T Consensus 315 ~~~~~~~l~~~I~~~s~~p~~~~~~~~~n~Sg~Al~~~~~~l~~k~~~~~~~~~~~l~~~~~li~~~l~~~~~~~~~~~~ 394 (474) T protein:vir:10 315 IENHLDRIEKNIMRFAKSVNFNSDEFNGNVPIIGMKLKLMALENKCMTFERKMTAMLRYQFKVILSALKRKGYNLDDDSY 394 (474) T ss_pred HHHHHHHHHHHHHHHhCCcccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCcccc Confidence 77778888899999989987544322 211111111 111223333444444444333332211100 111 Q ss_pred ceeeechhhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHHhCCCCCCccCceeeecccccccccccccCC-CCCCCCCCC Q lcl|Aclame:pro 341 NRMKFDIDDVIQPDWEAKSESTQKMVNSGVATPNEGREIMGLPRSDDPKADELYANSALQPLGATPDGAV-EGEEAPAPK 419 (518) Q Consensus 341 ~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~T~NE~R~~~g~~pi~~~~gD~~~~~~n~~~~~~~~~~~~-~~~~~~~~~ 419 (518) ..+++.+..-+..|..+.++.+.++. |+++..-+.+++++- +++... +........ ..+..+... T Consensus 395 ~~i~~~f~~~~p~d~~e~a~~~~kl~--g~iS~et~~~~l~~v--~d~~~E----------~eri~~E~~e~~~~~~~~~ 460 (474) T protein:vir:10 395 LNLIFKFTRNIPVNKLEESQVLINLK--GQVSERTRLGQSQLV--DDVDYE----------LDEMEKESLEFNDKLPDID 460 (474) T ss_pred ccceEEeCCCCCCCHHHHHHHHHHHh--ccCchHHHHHhCCCC--CCHHHH----------HHHHHHHHHHHHhhccccc Confidence 23556666777889999999999884 789988888887642 221110 000000000 000000000 Q ss_pred CcccCCCCCccCCccccccc Q lcl|Aclame:pro 420 RPASTPVASLDQSPPASVPG 439 (518) Q Consensus 420 ~~~~~~~~~~~~~~~~~~~~ 439 (518) + .+.++...+...+ T Consensus 461 ~------~~~~~~~~~~~s~ 474 (474) T protein:vir:10 461 E------GDANDKSQNNQSE 474 (474) T ss_pred C------CCcCCCCccccCC Confidence 0 0000000000000 No 173 >protein:vir:94101 Length: 474 # NCBI annotation: ORF007 # Family: family:all:125 # MgeID: mge:1494 # MgeName: 96 # Cross-refs: genbank:acc:YP_240229;genbank:gi:66395892;genbank:GeneID:5133270 Probab=98.57 E-value=2.7e-07 Score=56.63 Aligned_cols=391 Identities=10% Similarity=0.046 Sum_probs=178.5 Q ss_pred CCCCCCCCCccccccc---------------cchhhhhhhcc-CccCCcccCccchhhHHHHhhhHHHHHHHHHHHHhhc Q lcl|Aclame:pro 1 MLLANGQTLSAPAMAE---------------LSPQMQDSYYY-APAVGMQLERQFSLYGGIYKNQPWVRTVIAKRAQALA 64 (518) Q Consensus 1 ~~f~~~~~~~~~~~~~---------------~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~v~~~v~~ia~~ia 64 (518) +|=..+. ..+.... ..+........ .+........ .. ..-..++....+|+..+.-+- T Consensus 23 ~i~~~~~--~~~r~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~---~~ki~~n~~~~ivd~~~~yl~ 96 (474) T protein:vir:94 23 LIESHKD--DRERMVNLYNRYKTHIDYVPIFKRRPIEEKEDFETGGNVRRLDV-SV---NNKLNNSFDSEIVDTRVGYLH 96 (474) T ss_pred HHHHhhh--hhHHHHHHHHHHhhhcchhhhhcchhhhhhhhhhhccccccccc-Cc---ccccccchHHHHHHhHhhhee Confidence 0000000 0000000 00000000000 0000000000 00 000124566777888888888 Q ss_pred cCceEEEEecCCceeeecchHHHHHhhccCccCCHHHHHHHHHHHHHHcCCeeEEeeeCCCCceeeeeeeCCcceEEEec Q lcl|Aclame:pro 65 RLPVKCMFTSGDTETEEHDTGYAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQKNKSGTPEKLMPMHPSRVAIKRN 144 (518) Q Consensus 65 ~lp~~v~~~~~~~~~~~~~~~~~~l~~~PN~~~t~~~f~~~~~~~~ll~G~~~~~i~~~~~G~~~~l~~l~p~~v~~~~~ 144 (518) +-|+.+.-..+.. .+..+..++.+-............+..+++.+|.+|.++..+.+|.+ .+..++|..+.++++ T Consensus 97 g~pv~~~~~~~~~----~~e~~~~~l~~~~~~n~~~~~~~~~~~~~~~~G~a~~~~~~d~~~~~-~~~~i~p~~~~~v~d 171 (474) T protein:vir:94 97 GVPVTYDLDENAE----KNEKLKKFITNFAIRNSVDDEDSEIGKMAAICGYGARLAYIDTNGDI-RIKNIDPYNVIFVGD 171 (474) T ss_pred ccceeEeeCCCCc----chHHHHHHHHHHHhhcCHhHHHHHHHHHHhhcCeEEEEEEeCCCCee-EEEEEcccceEEEEc Confidence 8888864322211 12222223333222234566677788899999999999888888864 577788888877776 Q ss_pred cCcceEEE--EeeccCCCCce------------------------------eEEEeeeeeEEeecCCCCcccccchHHHH Q lcl|Aclame:pro 145 SRTGRYEY--YFQAGAGVGTQ------------------------------LVSFADDEVVPIRFFNPDGLERGLSLMES 192 (518) Q Consensus 145 ~~~~~~~~--~~~~~~~~~~~------------------------------~~~~~~~~vih~~~~~~~~~~~G~s~~~~ 192 (518) ..+..... .+.......+. ...+..-.|++|++. ..|.|-+.. T Consensus 172 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~g~vPvv~~~n~-----~~g~sd~e~ 246 (474) T protein:vir:94 172 NILEPTYSLRYFYEKDDDNGTDYVYAEFYDNAYYYVFRGEGIDALQEVGRYEHLFDYNPLFGVPNN-----KEMIGDAEK 246 (474) T ss_pred CCCceEEEEEEEEEeeCCCceEEEEEEEEcCceEEEEeecCCCcccccccccCCCCccceEEecCC-----CCCCCchHH Confidence 54432211 01100000100 001111123343322 247777777 Q ss_pred HHHHHHHHHHHHHHHHHHHHccCCcceeeeeCCcCCHHHHHHHHHHHHHHhcCccccccceeccCCcccccccCChhhHH Q lcl|Aclame:pro 193 LKSTIFSEDSSRNATAAMWKNAGRPNLVLRHEKRLSPEAQQRLREQFDRAHAGSSNTGKTMVVEEGMEPIPLQLTAVEMQ 272 (518) Q Consensus 193 ~~~~i~~~~~~~~~~~~~~~ng~~p~gil~~~~~~~~e~~~~~~~~~~~~~~g~~n~g~~~vl~~g~~~~~~~~~~~d~q 272 (518) ....++....+..-..+.+...+.|-.+++- ...+++....++ ..+.+.+.+++.++..+........ T Consensus 247 v~~liDa~d~~~S~~~~~~~~~~~~~l~i~g-~~~~~~~~~~~~-----------~~~~i~~~~~~~~~~~l~~~~~~~~ 314 (474) T protein:vir:94 247 VIHLIDAYDLTMSDASSEISQTRLAYLVLRG-MGMSEEMIQETQ-----------KSGAFELFDKDMDVKYLTKDVNDTM 314 (474) T ss_pred HHHHHHHHHHHHHHHHHHHHHhhcchhhhcc-CCCCchhhhhhh-----------hcceeEecCCCCceeEEeccCCHHH Confidence 7777776666655566666666667655543 333433322211 1344555666666666665555566 Q ss_pred HHHHHHHHHHHHHHHhccchHhhccc-cccccccHH----------HHHHHHHHHHHHHHHHHHHHHHHhhhcchh-hcc Q lcl|Aclame:pro 273 FIEARQLNREEVCGVYDIAPPIVHIL-DRATFSNIS----------AQMRAFYRDTMAIPIARIQSAMDKYVGQYW-VRK 340 (518) Q Consensus 273 ~~e~~~~~~~~Ia~~fgVpp~~lg~~-~~~~~s~~e----------~~~~~~~~~~l~P~~~~ie~~ln~~l~~~~-~~~ 340 (518) +....+...+.|...-++|..-.+.. ++.+..... ......+..+++-.++.|...++..-.... ... T Consensus 315 ~~~~~~~l~~~I~~~s~~p~~~~~~~~~n~Sg~Al~~~~~~l~~k~~~~~~~~~~~l~~~~~li~~~l~~~~~~~~~~~~ 394 (474) T protein:vir:94 315 IENHLDRIEKNIMRFAKSVNFNSDEFNGNVPIIGMKLKLMALENKCMTFERKMTAMLRYQFKVILSALKRKGYNLDDDSY 394 (474) T ss_pred HHHHHHHHHHHHHHHhCCcccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCcccc Confidence 77778888899999989987544322 211111111 111223333444444444333332211100 111 Q ss_pred ceeeechhhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHHhCCCCCCccCceeeecccccccccccccCC-CCCCCCCCC Q lcl|Aclame:pro 341 NRMKFDIDDVIQPDWEAKSESTQKMVNSGVATPNEGREIMGLPRSDDPKADELYANSALQPLGATPDGAV-EGEEAPAPK 419 (518) Q Consensus 341 ~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~T~NE~R~~~g~~pi~~~~gD~~~~~~n~~~~~~~~~~~~-~~~~~~~~~ 419 (518) ..+++.+..-+..|..+.++.+.++. |+++..-+.+++++- +++... +........ ..+..+... T Consensus 395 ~~i~~~f~~~~p~d~~e~a~~~~kl~--g~iS~et~~~~l~~v--~d~~~E----------~eri~~E~~e~~~~~~~~~ 460 (474) T protein:vir:94 395 LNLIFKFTRNIPVNKLEESQVLINLK--GQVSERTRLGQSQLV--DDVDYE----------LDEMEKESLEFNDKLPDID 460 (474) T ss_pred ccceEEeCCCCCCCHHHHHHHHHHHh--ccCchHHHHHhCCCC--CCHHHH----------HHHHHHHHHHHHhhccccc Confidence 23556666777889999999999884 789988888887642 221110 000000000 000000000 Q ss_pred CcccCCCCCccCCccccccc Q lcl|Aclame:pro 420 RPASTPVASLDQSPPASVPG 439 (518) Q Consensus 420 ~~~~~~~~~~~~~~~~~~~~ 439 (518) + .+.++...+...+ T Consensus 461 ~------~~~~~~~~~~~s~ 474 (474) T protein:vir:94 461 E------GDANDKSQNNQSE 474 (474) T ss_pred C------CCcCCCCccccCC Confidence 0 0000000000000 No 174 >protein:vir:9306 Length: 511 # NCBI annotation: phi Mu50B-like protein # Family: family:all:125 # MgeID: mge:165 # MgeName: phi 11 # Cross-refs: genbank:acc:NP_803284;genbank:gi:29028594;genbank:GeneID:1258040 Probab=98.56 E-value=2.8e-07 Score=56.53 Aligned_cols=414 Identities=9% Similarity=0.024 Sum_probs=176.6 Q ss_pred CCCCCCCCCccccccccchhhhhhhccCccCCcccCccchh-hHHHHhhhHHHHHHHHHHHHhhccCceEEEEecCCcee Q lcl|Aclame:pro 1 MLLANGQTLSAPAMAELSPQMQDSYYYAPAVGMQLERQFSL-YGGIYKNQPWVRTVIAKRAQALARLPVKCMFTSGDTET 79 (518) Q Consensus 1 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~v~~~v~~ia~~ia~lp~~v~~~~~~~~~ 79 (518) +|-... ....+.. .-+...+.+.-..-....+.... ....-...+.....|+..+.-+-+-|+.+-..++ T Consensus 48 ~i~~~~-~~~~~r~----~~l~~Yy~g~~~il~~~~~~~~~~~~~~ki~~n~~k~Iv~~~~~yl~g~p~~~~~~d~---- 118 (511) T protein:vir:93 48 YIEHHM-DYQRPRL----KVLSDYYEGKTKNLVELTRRKEEYMADNRVAHDYASYISDFINGYFLGNPIQYQDDDK---- 118 (511) T ss_pred HHHHHH-HhhHHHH----HHHHHHhcccCccccccCcCcccccCcceeecchHHHHHHHHhhhhcccCeeeccCCh---- Confidence 000000 0000000 00111111100000000000000 0000012356667778888877788877632111 Q ss_pred eecchHHHHHhhccCccCCHHHHHHHHHHHHHHcCCeeEEeeeCCCCceeeeeeeCCcceEEEeccCc-ceEEEE--ee- Q lcl|Aclame:pro 80 EEHDTGYAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQKNKSGTPEKLMPMHPSRVAIKRNSRT-GRYEYY--FQ- 155 (518) Q Consensus 80 ~~~~~~~~~l~~~PN~~~t~~~f~~~~~~~~ll~G~~~~~i~~~~~G~~~~l~~l~p~~v~~~~~~~~-~~~~~~--~~- 155 (518) .....+..++ ..-........+..+++.+|.+|.++..+.+|.+ .+..++|..+.++++... +...+. |. T Consensus 119 -~~~~~l~~~~----~~n~~~~~~~~~~~~~~~~G~ay~~vy~de~~~~-~i~~~~p~~~~~vydd~~~~~~~~~vr~~~ 192 (511) T protein:vir:93 119 -DVLEVIEAFN----DLNDVESHNRSLGLDLSIYGKAYELMIRNQDDET-RLYKSDAMSTFVIYDNTIERNSIAGVRYLR 192 (511) T ss_pred -HHHHHHHHHH----hhcCHhHHHHHHHHHHHhcCeeEEEEEeCCCCce-EEEEEccceeEEEEcCCCCCceEEEEEEEE Confidence 1111222232 2234556667788899999999999988888865 477789999988876532 111111 11 Q ss_pred --ccCCCCce---eE-EEeeeeeEEeecCCC-------------------------CcccccchHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 156 --AGAGVGTQ---LV-SFADDEVVPIRFFNP-------------------------DGLERGLSLMESLKSTIFSEDSSR 204 (518) Q Consensus 156 --~~~~~~~~---~~-~~~~~~vih~~~~~~-------------------------~~~~~G~s~~~~~~~~i~~~~~~~ 204 (518) ........ .+ .+.+..+.+++.... .+...|.|.+..+...++....+. T Consensus 193 ~~~~~~~~~~~~~~~~iyt~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~vPvv~~~nn~~g~gd~e~v~~liDa~d~~~ 272 (511) T protein:vir:93 193 TKPIDKTDEDEVFTVDLFTSHGVYRYLTSRTNGLKLTPRENGFESHSFERMPITEFSNNERRKGDYEKVITLIDLYDNAE 272 (511) T ss_pred eeeccccccceEEEEEEEeCCcEEEEEecCCCccccccccccccccCCCccceEEecCCCCCCCchhhHHHHHHHHHHHH Confidence 00000000 01 122333333211100 011357888888888888777666 Q ss_pred HHHHHHHHccCCcceeeeeCCcCCHHHHHHHHHHHHHHhcCccc-cccceeccCCcccccccCChhhHHHHHHHHHHHHH Q lcl|Aclame:pro 205 NATAAMWKNAGRPNLVLRHEKRLSPEAQQRLREQFDRAHAGSSN-TGKTMVVEEGMEPIPLQLTAVEMQFIEARQLNREE 283 (518) Q Consensus 205 ~~~~~~~~ng~~p~gil~~~~~~~~e~~~~~~~~~~~~~~g~~n-~g~~~vl~~g~~~~~~~~~~~d~q~~e~~~~~~~~ 283 (518) .-..+.+...+.|-.+++-....+.+.....++...-....... .+...-..++.++..++.......+....+...+. T Consensus 273 S~~~~~~~~~~~~~lv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~~ 352 (511) T protein:vir:93 273 SDTANYMSDLNDAMLLIKGNLNLDPVEVRKQKEANVLFLEPTVYADSEGRETEGSVDGGYIYKQYDVQGTEAYKDRLNSD 352 (511) T ss_pred HHHHHHHHHhhCcceeeecCcccCchhhcccccccceecccccccccccccCCCCcceeEEeecCCHHHHHHHHHHHHHH Confidence 66667777777776666543434444332222111110000000 00111123445555555444455566777888899 Q ss_pred HHHHhccchHhhccccccccccHH------------HHHHHHHHHHHHHHHHHHHHHHHhhhcchhh-ccceeeechhhh Q lcl|Aclame:pro 284 VCGVYDIAPPIVHILDRATFSNIS------------AQMRAFYRDTMAIPIARIQSAMDKYVGQYWV-RKNRMKFDIDDV 350 (518) Q Consensus 284 Ia~~fgVpp~~lg~~~~~~~s~~e------------~~~~~~~~~~l~P~~~~ie~~ln~~l~~~~~-~~~~~~fd~~~l 350 (518) |+..-++|..-.+... ++-|... ......+..+|.-.++.|...++..-..... ....+++.+..- T Consensus 353 I~~~s~~P~~~~~~~~-~n~Sg~Al~~~~~~l~~k~~~k~~~f~~~l~~~~~li~~~l~~~~~~~~~~d~~~i~~~f~~~ 431 (511) T protein:vir:93 353 IHMFTNTPNMKDDNFS-GTQSGEAMKYKLFGLEQRTKTKEGLFTKGLRRRAKLLETILKNTWSIDANKDFNTVRYVYNRN 431 (511) T ss_pred HHHHhCCccccccccc-ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccccccccceEEeCCC Confidence 9999999875443221 1111110 1112233333443333333322221111111 112345556677 Q ss_pred hccCHHHHHHHHHHHHhCCCcCHHHHHHHHhCCCCCCccCceeeecccccccccccccCCCCCCCCCCCCcccCCCCCcc Q lcl|Aclame:pro 351 IQPDWEAKSESTQKMVNSGVATPNEGREIMGLPRSDDPKADELYANSALQPLGATPDGAVEGEEAPAPKRPASTPVASLD 430 (518) Q Consensus 351 ~~~d~~~~~~~~~~~~~~g~~T~NE~R~~~g~~pi~~~~gD~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 430 (518) +..|..+.++.+.++ .|+++..-+++++++ ++++.. ++ .-+.............+...++. ..++ T Consensus 432 ~p~n~~e~~~~~~kl--~g~iS~et~~~~l~~--v~d~~~-E~------~ri~~E~~~~~~~~~~~~~~~~~---~~~~- 496 (511) T protein:vir:93 432 LPKSLIEELKAYIDS--GGKISQTTLMSLFSF--FQDPEL-EV------KKIEEDEKESIKKAQKGIYKDPR---DIND- 496 (511) T ss_pred CCCCHHHHHHHHHHH--hccCchHHHHHhCCC--CCCHHH-HH------HHHHHHHHHHHHHHhhhcccCCC---CCCC- Confidence 788999999998888 478988778887754 332211 10 00000000000000000000000 0000 Q ss_pred CCccccccccChhhhc Q lcl|Aclame:pro 431 QSPPASVPGLSPTNSD 446 (518) Q Consensus 431 ~~~~~~~~~~~~~~~~ 446 (518) +..++..+..+.+.+ T Consensus 497 -~~~~~~~~~~~~~~~ 511 (511) T protein:vir:93 497 -DEQDDDTKDTVDKKE 511 (511) T ss_pred -CCCCCcccccccccC Confidence 000011111111111 No 175 >protein:vir:9871 Length: 429 # NCBI annotation: hypothetical protein # Family: family:all:125 # MgeID: mge:177 # MgeName: 315.5 # Cross-refs: genbank:acc:NP_795633;genbank:gi:28876408;genbank:GeneID:1257942 Probab=98.50 E-value=4.3e-07 Score=55.46 Aligned_cols=371 Identities=10% Similarity=0.050 Sum_probs=167.4 Q ss_pred ccchhhhhh--------------hccCccCCcccCcc-chhh-HHHHhhhHHHHHHHHHHHHhhccCceEEEEecCCcee Q lcl|Aclame:pro 16 ELSPQMQDS--------------YYYAPAVGMQLERQ-FSLY-GGIYKNQPWVRTVIAKRAQALARLPVKCMFTSGDTET 79 (518) Q Consensus 16 ~~~~~~~~~--------------~~~~~~~~~~~~~~-~~~~-~~~~~~~~~v~~~v~~ia~~ia~lp~~v~~~~~~~~~ 79 (518) ....++... ..+..+....+.+. .... ...-..++....+|+..+..+-+-|+.+...++ T Consensus 1 l~~~~l~~~i~~~~~~~~r~~~l~~yy~g~~~il~~~~~~~~~~~~ki~~n~~~~ivd~~~~~l~g~~~~~~~~~~---- 76 (429) T protein:vir:98 1 MTKDLLSELIQKHRSFNLSYSAYKQLYEGDHAILQQKQKEQYKPDNRLVVNFAKYIVDTFNGYFIGVPVQTSHENK---- 76 (429) T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccccccCCCcceeecchHHHHHHHHhhhhcccCceeecCCh---- Confidence 011111110 00000000000000 0000 001123467778888888888888877642211 Q ss_pred eecchHHHHHhhccCccCCHHHHHHHHHHHHHHcCCeeEEeeeCCCCceeeeeeeCCcceEEEeccCcc-eEEEEeec-c Q lcl|Aclame:pro 80 EEHDTGYAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQKNKSGTPEKLMPMHPSRVAIKRNSRTG-RYEYYFQA-G 157 (518) Q Consensus 80 ~~~~~~~~~l~~~PN~~~t~~~f~~~~~~~~ll~G~~~~~i~~~~~G~~~~l~~l~p~~v~~~~~~~~~-~~~~~~~~-~ 157 (518) .....+..++.+ | ........+..+.+.+|.+|..+..+.+|.+ .+..++|..+.+.++.... ...+.+.. . T Consensus 77 -~~~~~l~~~~~~-n---~~~~~~~~~~~~~~~~G~~~~~v~~d~~g~~-~~~~~~p~~~~~v~dd~~~~~~~~~i~~~~ 150 (429) T protein:vir:98 77 -QVSNYLELLDGY-N---DQDDNNAELSKICSIYGHGYELVFNDENAEA-GITYLTPLEAFIVYDDSIRQKPLFAVRYFY 150 (429) T ss_pred -HHHHHHHHHHhh-c---CHhHHHHHHHHHHhhcCeEEEEEEecCCCcE-EEEEEcccceEEEEeCCCCCceEEEEEEEE Confidence 111223333333 2 3345667788899999999999988888875 4677888888887764321 11111100 0 Q ss_pred CCCCceeEE--------------------------EeeeeeEEeecCCCCcccccchHHHHHHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 158 AGVGTQLVS--------------------------FADDEVVPIRFFNPDGLERGLSLMESLKSTIFSEDSSRNATAAMW 211 (518) Q Consensus 158 ~~~~~~~~~--------------------------~~~~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~ 211 (518) ......... +..-.|++++.. .+|.|.+..+...++....+.....+.+ T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~vPvv~~~n~-----~~g~sd~e~v~~liD~~d~~~s~~~~~~ 225 (429) T protein:vir:98 151 NKGGVLEGSYSDASNITYFKDGEKGIEIGESEPHPFDGVPMIEYVEN-----EERQSLLASVVTLINAFNKAISEKANDV 225 (429) T ss_pred ecCceEEEEEEeCceEEEEEecCCceEecccccccCCccceEEecCC-----CCCCCcHHHHHHHHHHHHHHHHHHHHHH Confidence 000000011 111224444432 3588888888887877777766667777 Q ss_pred HccCCcceeeeeCCcCCHHHHHHHHHHHHHHhcCccccccceeccC----CcccccccCChhhHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 212 KNAGRPNLVLRHEKRLSPEAQQRLREQFDRAHAGSSNTGKTMVVEE----GMEPIPLQLTAVEMQFIEARQLNREEVCGV 287 (518) Q Consensus 212 ~ng~~p~gil~~~~~~~~e~~~~~~~~~~~~~~g~~n~g~~~vl~~----g~~~~~~~~~~~d~q~~e~~~~~~~~Ia~~ 287 (518) +..+.|-.+++- ...+++....++ .++++.+++ +.+...++.......+....+...+.|+.. T Consensus 226 ~~~~~p~~~i~g-~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~i~~~ 292 (429) T protein:vir:98 226 EYFADAYLKILG-AELDDETLKSLR------------DTRIINLKDTDAQQLTVEFLQKPDADATQEHLLDRLENLIFRT 292 (429) T ss_pred HHhcCceeeeec-CCCCcchhhhHh------------hCceeeccCCCCCCcceeEEeecCCHHHHHHHHHHHHHHHHHH Confidence 777788766653 233333222111 112333332 123333433333444556678888899998 Q ss_pred hccchHhhccccccccccHHH----------HHHHHHHHHHHHHHHHHHHHHHhhhcchhhccceeeechhhhhccCHHH Q lcl|Aclame:pro 288 YDIAPPIVHILDRATFSNISA----------QMRAFYRDTMAIPIARIQSAMDKYVGQYWVRKNRMKFDIDDVIQPDWEA 357 (518) Q Consensus 288 fgVpp~~lg~~~~~~~s~~e~----------~~~~~~~~~l~P~~~~ie~~ln~~l~~~~~~~~~~~fd~~~l~~~d~~~ 357 (518) -++|..-.+..++.+....+. .....+..++.-.++.+...++..-.. .....+++.+...+..|..+ T Consensus 293 s~~p~~~~~~~gn~Sg~Al~~~~~~l~~k~~~~~~~~~~~l~~~~~li~~~~~~~~~~--~d~~~i~v~f~~~~p~~~~~ 370 (429) T protein:vir:98 293 AMVANISDESFGTASGIALRYRLQAMDNLAKTKERKFMSGMNRRYKLIASYPTSKIGP--KDWIGIKYKFTRNLPANLLE 370 (429) T ss_pred hCccccCccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCc--cccccceEEeCCCCCcCHHH Confidence 888853322111111100110 011122222222222222211111111 11123455666778889999 Q ss_pred HHHHHHHHHhCCCcCHHHHHHHHhCCCCCCccCceeeecccccccccccccCCCCCCCCCCCCcccCCCCCccCCcccc Q lcl|Aclame:pro 358 KSESTQKMVNSGVATPNEGREIMGLPRSDDPKADELYANSALQPLGATPDGAVEGEEAPAPKRPASTPVASLDQSPPAS 436 (518) Q Consensus 358 ~~~~~~~~~~~g~~T~NE~R~~~g~~pi~~~~gD~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 436 (518) .++.+.++ .|+++..-+.++++. ++++..+.- -+..........+.. . ...++.+...+ T Consensus 371 ~a~~~~kl--~g~is~et~~~~l~~--v~d~~~E~~-------ri~~E~~~~~~~~~~-~--------~~~~~~~~~~~ 429 (429) T protein:vir:98 371 ESQIAGNL--AGIVSEETQVGVLSI--VENPQKEIE-------RKNSDKSTLISRQAG-G--------LNGQNTTTILE 429 (429) T ss_pred HHHHHHHH--hccCchHHHHHhCCC--CCCHHHHHH-------HHHHHHHHHHHHHHh-h--------hcCCCCCCCCC Confidence 99998887 578888777777754 232211100 000000000000000 0 00000000000 No 176 >protein:vir:103951 Length: 511 # NCBI annotation: phage portal protein # Family: family:all:125 # MgeID: mge:1662 # MgeName: phiNM # Cross-refs: genbank:acc:YP_873988;genbank:gi:118430763;genbank:GeneID:4525445 Probab=98.48 E-value=4.9e-07 Score=55.19 Aligned_cols=414 Identities=9% Similarity=0.023 Sum_probs=178.3 Q ss_pred CCCCCCCCCccccccccchhhhhhhccCccCCcccCccc-hhhHHHHhhhHHHHHHHHHHHHhhccCceEEEEecCCcee Q lcl|Aclame:pro 1 MLLANGQTLSAPAMAELSPQMQDSYYYAPAVGMQLERQF-SLYGGIYKNQPWVRTVIAKRAQALARLPVKCMFTSGDTET 79 (518) Q Consensus 1 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~v~~~v~~ia~~ia~lp~~v~~~~~~~~~ 79 (518) +|-.... ...+.. ..+...+.+.-..-....... ......-.........|+..+.-+-+-|+.+-..++ T Consensus 48 ~i~~~~~-~~~~r~----~~l~~Yy~g~~~i~~~~~~~~~~~~~~~ki~~n~~k~Iv~~~~~yl~g~p~~~~~~d~---- 118 (511) T protein:vir:10 48 CIEHHMD-YQRPRL----KVLSDYYEGKTKNLVELTRRKEEYMADNRVAHDYASYISDFINGYFLGNPIQYQDDDK---- 118 (511) T ss_pred HHHHHHH-hhHHHH----HHHHHHhcccCccccccCcccccccCcceeecchHHHHHHHHhhhhcccCceeecCch---- Confidence 1110000 000000 001111111100000000000 000000112356667788888878888887632211 Q ss_pred eecchHHHHHhhccCccCCHHHHHHHHHHHHHHcCCeeEEeeeCCCCceeeeeeeCCcceEEEeccCc-ceEEEE--e-e Q lcl|Aclame:pro 80 EEHDTGYAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQKNKSGTPEKLMPMHPSRVAIKRNSRT-GRYEYY--F-Q 155 (518) Q Consensus 80 ~~~~~~~~~l~~~PN~~~t~~~f~~~~~~~~ll~G~~~~~i~~~~~G~~~~l~~l~p~~v~~~~~~~~-~~~~~~--~-~ 155 (518) .....+..++.. -........+..+++.+|.+|.++..+.+|.+ .+..++|..+.++++... ....+. + . T Consensus 119 -~~~~~l~~~~~~----n~~~~~~~~~~~~~~i~G~ay~~vy~dedg~~-~i~~~~p~~~~~vydd~~~~~~~~~vr~~~ 192 (511) T protein:vir:10 119 -DVLEAIEAFNDL----NDVESHNRSLGLDLSIYGKAYEIMIRNQDDET-RLYKSDAMSTFVIYDNTIERNSIAGVRYLR 192 (511) T ss_pred -HHHHHHHHHHhh----cCHHHHHHHHHHHHHhcCeeEEEEEeCCCCce-EEEEEccceeEEEEcCCCCCceEEEEEEEE Confidence 111223333332 23445556778889999999999988888864 567788888888876532 111111 1 0 Q ss_pred --ccCCCC---ceeE-EEeeeeeEEeecCCC-------------------------CcccccchHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 156 --AGAGVG---TQLV-SFADDEVVPIRFFNP-------------------------DGLERGLSLMESLKSTIFSEDSSR 204 (518) Q Consensus 156 --~~~~~~---~~~~-~~~~~~vih~~~~~~-------------------------~~~~~G~s~~~~~~~~i~~~~~~~ 204 (518) ...... .... .+.+..+.++..... .+...|.|.+..+...++....+. T Consensus 193 ~~~~d~~~~~~~~~~~iyt~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~vPvv~f~nn~~g~gd~e~v~~liDa~d~~~ 272 (511) T protein:vir:10 193 TKPIDKTDEDEVFTVDLFTSHGVYRYLTSRTNGLKLTPRENGFESHSFERMPITEFSNNERRKGDYEKVITLIDLYDNAE 272 (511) T ss_pred eeecccCccceEEEEEEEeCCcEEEEEecCCCcccccccccccccccCcceeEEEecCCCCCCCchhhhHHHHHHHHHHH Confidence 000000 0001 122233333211000 001257888888888888777666 Q ss_pred HHHHHHHHccCCcceeeeeCCcCCHHHHHHHHHHHHHHhcCcccc-ccceeccCCcccccccCChhhHHHHHHHHHHHHH Q lcl|Aclame:pro 205 NATAAMWKNAGRPNLVLRHEKRLSPEAQQRLREQFDRAHAGSSNT-GKTMVVEEGMEPIPLQLTAVEMQFIEARQLNREE 283 (518) Q Consensus 205 ~~~~~~~~ng~~p~gil~~~~~~~~e~~~~~~~~~~~~~~g~~n~-g~~~vl~~g~~~~~~~~~~~d~q~~e~~~~~~~~ 283 (518) .-..+.+...+.|-.+++-....+.++....++.-.-........ +...-..+|.++..++.......+....+...+. T Consensus 273 S~~~~~~~~~~~~~lv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~e~~~~~L~~~ 352 (511) T protein:vir:10 273 SDTANYMSDLNDAMLLIKGNLNLDPVEVRKQKEANVLFLEPTVYADSEGRETEGSVDGGYIYKQYDVQGTEAYKDRLNSD 352 (511) T ss_pred HHHHHHHHHhhCceeeeeccccCCchhhccchhccceecccccccccccccCCCCcceeEEeecCCHHHHHHHHHHHHHH Confidence 666677777777776665544444444332222111111100000 1111123455555555545556667778888889 Q ss_pred HHHHhccchHhhccccccccccHH------------HHHHHHHHHHHHHHHHHHHHHHHhhhcch-hhccceeeechhhh Q lcl|Aclame:pro 284 VCGVYDIAPPIVHILDRATFSNIS------------AQMRAFYRDTMAIPIARIQSAMDKYVGQY-WVRKNRMKFDIDDV 350 (518) Q Consensus 284 Ia~~fgVpp~~lg~~~~~~~s~~e------------~~~~~~~~~~l~P~~~~ie~~ln~~l~~~-~~~~~~~~fd~~~l 350 (518) |+..-++|..-.+... ++-|... ......+..+|.-.++.|...+...-... ......++|.+..- T Consensus 353 I~~~s~~P~~~~~~~~-~n~Sg~Al~~~~~~l~~k~~~k~~~f~~~l~~~~~li~~~~~~~~~~~~~~d~~~i~i~f~~~ 431 (511) T protein:vir:10 353 IHMFTNTPNMKDDNFS-GTQSGEAMKYKLFGLEQRTKTKEGLFTKGLRRRAKLLETILKNTRSIDANKDFNTVRYVYNRN 431 (511) T ss_pred HHHHhCCccccccccc-ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCcccccccceeeEEeCCC Confidence 9998888875443221 1111111 11222333333333333333322211111 11122456667777 Q ss_pred hccCHHHHHHHHHHHHhCCCcCHHHHHHHHhCCCCCCccCceeeecccccccccccccCCCCCCCCCCCCcccCCCCCcc Q lcl|Aclame:pro 351 IQPDWEAKSESTQKMVNSGVATPNEGREIMGLPRSDDPKADELYANSALQPLGATPDGAVEGEEAPAPKRPASTPVASLD 430 (518) Q Consensus 351 ~~~d~~~~~~~~~~~~~~g~~T~NE~R~~~g~~pi~~~~gD~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 430 (518) +..|..+.++.+.+++ |+++..-+.+++++ ++++.- ++ .-+.............+...++. ..++ T Consensus 432 ~p~d~~~~~~~~~kl~--G~iS~et~~~~l~~--v~d~~~-E~------~ri~~E~~~~~~~~~~~~~~~~~---~~~~- 496 (511) T protein:vir:10 432 LPKSLIEELKAYIDSG--GKISQTTLMSLFSF--FQDPEL-EV------KKIEEDEKESIKKAQKGIYKDPR---DIND- 496 (511) T ss_pred CCcCHHHHHHHHHHHh--ccCcHHHHHHhCCC--CCCHHH-HH------HHHHHHHHHHHHHHhhhcccCCC---CCCC- Confidence 8889999999999885 78888778877754 332211 10 00000000000000000000000 0000 Q ss_pred CCccccccccChhhhc Q lcl|Aclame:pro 431 QSPPASVPGLSPTNSD 446 (518) Q Consensus 431 ~~~~~~~~~~~~~~~~ 446 (518) +..++..+..+.+.+ T Consensus 497 -~~~~~~~~~~~~~~~ 511 (511) T protein:vir:10 497 -DEQDDDTKDTVDKKE 511 (511) T ss_pred -CCCCCcccCcccccC Confidence 000000000011000 No 177 >protein:vir:79703 Length: 505 # NCBI annotation: minor structural protein gp61 # Family: family:all:898 # MgeID: mge:1873 # MgeName: LL-H # Cross-refs: genbank:acc:YP_001285880;genbank:gi:148750838;genbank:GeneID:5220405 Probab=98.47 E-value=5.2e-07 Score=55.01 Aligned_cols=392 Identities=13% Similarity=0.045 Sum_probs=181.4 Q ss_pred CCCCCCCC-------Ccccc-ccc-cchhhhhhhccCccCCcccCccc---hhhHHHHhhhHHHHHHHHHHHHhhccCce Q lcl|Aclame:pro 1 MLLANGQT-------LSAPA-MAE-LSPQMQDSYYYAPAVGMQLERQF---SLYGGIYKNQPWVRTVIAKRAQALARLPV 68 (518) Q Consensus 1 ~~f~~~~~-------~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~v~~~v~~ia~~ia~lp~ 68 (518) +.|++.-. ...+. +.. +.-| ...+.+.+ .++.... ...............+++..|+-+..=|. T Consensus 18 ~~~~~~~~~i~d~~~i~~~~~~~~~i~~~-~~~Y~g~~---~~l~~~~~~~~~~~~~~~slnl~~~i~~~~A~ll~~e~~ 93 (505) T protein:vir:79 18 VGMTKSLGQIIDDPRINLPADEVERIARD-KRYYMDDF---KQVTHKNSYGDTQKHELQSVNVTKLASAKLASLIFNEQC 93 (505) T ss_pred hcchhhhhhhhcccCCCCCHHHHHHHHHH-HHHhcCCC---ccccccccCCCccccceeecchHHHHHHHHHhhhcCCCc Confidence 22222211 00110 000 0111 11121111 1111000 00000011123445667777777766555 Q ss_pred EEEEecCCceeeecchHHHHHhhccCccCCHHHHHHHHHHHHHHcCCeeEEeeeCCCCceeeeeeeCCcceEEEeccCcc Q lcl|Aclame:pro 69 KCMFTSGDTETEEHDTGYAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQKNKSGTPEKLMPMHPSRVAIKRNSRTG 148 (518) Q Consensus 69 ~v~~~~~~~~~~~~~~~~~~l~~~PN~~~t~~~f~~~~~~~~ll~G~~~~~i~~~~~G~~~~l~~l~p~~v~~~~~~~~~ 148 (518) .+.-. +......+.+-...-.+..-.+..+.+.+..|.+++.+..+. |. +.+..++|..+.+...+.+. T Consensus 94 ~i~~~---------d~~~~e~l~~i~~~n~f~~~~~~~~e~a~a~G~~~~k~~~D~-~~-~~i~~v~ad~~~P~~~d~~~ 162 (505) T protein:vir:79 94 QVTVS---------DETANDFLDDVFQQNDFYTTFEEKLEEWIALGSGCVRPYVDS-GK-IKLAWATADQVYPLQADTNQ 162 (505) T ss_pred eeecC---------ChHHHHHHHHHHHhccHHHHHHHHHHHHhhcCCeEEEEEEeC-Cc-eEEEEEcCCeeEEEEEcCCC Confidence 44321 111222222222222345555667788888999988887763 33 34555666666654322221 Q ss_pred e-----------------EEEE-----------ee------cc-C-CCCceeE---------------E---EeeeeeEE Q lcl|Aclame:pro 149 R-----------------YEYY-----------FQ------AG-A-GVGTQLV---------------S---FADDEVVP 174 (518) Q Consensus 149 ~-----------------~~~~-----------~~------~~-~-~~~~~~~---------------~---~~~~~vih 174 (518) . .+|. |. .. + ...|..+ . ++...+.| T Consensus 163 ~~~~a~~~~~~~~~~~~~~~yt~lE~h~~~~~~~~I~n~ly~~~~~~~lG~~v~l~~~~~~~~l~~~~~~~g~~~p~f~~ 242 (505) T protein:vir:79 163 VNELAIASRTTEVENHRTIYYTLLEFHQWDHGDYVITNELYRSEAAETVGINVPLNSLEQYEGLEPQVKITGLKHPLFAF 242 (505) T ss_pred eEEEEEEEEEEEecCCcceEEEEEEEEEecCceEEEEEEEEecCCCCccCcccchhhcccccccCcceeecCCCcceEEE Confidence 1 0110 00 00 0 0001100 0 11223456 Q ss_pred eecCCCC----cccccchHHHHHHHHHHHHHHHHHHHHHHHHccCCccee----eeeCCcCCHHHHHHHHHHHHHHhcCc Q lcl|Aclame:pro 175 IRFFNPD----GLERGLSLMESLKSTIFSEDSSRNATAAMWKNAGRPNLV----LRHEKRLSPEAQQRLREQFDRAHAGS 246 (518) Q Consensus 175 ~~~~~~~----~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~p~gi----l~~~~~~~~e~~~~~~~~~~~~~~g~ 246 (518) |+.+.++ +.++|+|.+..+...++..........+-|+.|-..-.| +........+........|.. . T Consensus 243 ~~~~~~N~~~~~splG~S~~~~~~~~id~lD~~~s~~~~e~~~g~~~i~v~~~~l~~~~~~~~~~~~~~~~~fd~----~ 318 (505) T protein:vir:79 243 YRNKGANNKNFTSPMGMSLIDNSYTVIDAINRTHDQFVDEVKKGQRRLIVPAEWLKTGSSYGGQASETHPPMFDP----D 318 (505) T ss_pred ecCCcccccccCCccCCchhhhhHHHHHHHHHHHHHHHHHHHhcccceeechHHhcccCCCCcccccccccCCCc----c Confidence 6654333 234799999999999998888777777778775544222 222111111100000000100 0 Q ss_pred cccccceec-cCCcccccccCChhhHHHHHHHHHHHHHHHHHhccchHhhccccccccccHHHH-------------HHH Q lcl|Aclame:pro 247 SNTGKTMVV-EEGMEPIPLQLTAVEMQFIEARQLNREEVCGVYDIAPPIVHILDRATFSNISAQ-------------MRA 312 (518) Q Consensus 247 ~n~g~~~vl-~~g~~~~~~~~~~~d~q~~e~~~~~~~~Ia~~fgVpp~~lg~~~~~~~s~~e~~-------------~~~ 312 (518) .......-. +++..++.++....+.++.+..+...+.|+...|+++..+|..+++.. +..+. ... T Consensus 319 ~~~y~~~~~~~~~~~i~~~~~~ir~e~~~~~l~~~l~~i~~~~g~s~~~~~~~~~~~~-TAtei~s~~~~l~~t~~~~~~ 397 (505) T protein:vir:79 319 ETVYQAMYGDASEVGFHDATSPIRVADYQATMDFFLREFENQTGLSQGTFTTSPSGIQ-TATEVVTNNSQTYQTRSSYIT 397 (505) T ss_pred ceeeeeccCCCCCCceEEecccCCHHHHHHHHHHHHHHHHHHhCCChhhcCCCccccc-hHHHHHHHHhHHHHHHHHHHH Confidence 000000111 123456777777778888999999999999999999999997654332 22221 122 Q ss_pred HHHHHHHHHHHHHHHHHHhhhcch--------hhccceeeechhhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHHhCCC Q lcl|Aclame:pro 313 FYRDTMAIPIARIQSAMDKYVGQY--------WVRKNRMKFDIDDVIQPDWEAKSESTQKMVNSGVATPNEGREIMGLPR 384 (518) Q Consensus 313 ~~~~~l~P~~~~ie~~ln~~l~~~--------~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~T~NE~R~~~g~~p 384 (518) .++.+|..++..|........+.. ....+.+.|++++-+..|.++..+...+++.+|+|+.-.++.+. +- T Consensus 398 ~~~~al~~li~~i~~~~~~~~~~~~g~~~~~~~~~~~~i~v~f~d~i~~d~~~~~~~~~~~v~~Gi~s~e~~l~~~--~~ 475 (505) T protein:vir:79 398 QVEKTIKALTYAILELASVPSFYADGQARWTGDVDSLDITINFNDGVFVDQESKRAADLQAVQAQVMPKKQFLMRN--YG 475 (505) T ss_pred HHHHHHHHHHHHHHHHHHHhcccccccccccCCCCceeEEEEeCCCCCCCHHHHHHHHHHHHHcCCCCHHHHHHhc--CC Confidence 334444444444433222211111 11234567788888889999999999999999999998887664 22 Q ss_pred CCCccCceeeecccccccccccccCCCCCCCCCCCCcccCCCCCc Q lcl|Aclame:pro 385 SDDPKADELYANSALQPLGATPDGAVEGEEAPAPKRPASTPVASL 429 (518) Q Consensus 385 i~~~~gD~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 429 (518) ++++...+.+.. +.. ++. ...|.. ..-.++ T Consensus 476 ~~eeea~~el~r-----i~~--E~~---~~~p~~-----~~~gg~ 505 (505) T protein:vir:79 476 LDEEEADEWLAQ-----IDA--ENS---TAEPEF-----NQFGGD 505 (505) T ss_pred CChHHHHHHHHH-----HHH--hcc---ccCCCc-----hhccCC Confidence 333333222111 100 000 000111 111111 No 178 >protein:vir:80680 Length: 441 # NCBI annotation: gp3 # Family: family:all:524 # MgeID: mge:1884 # MgeName: PA6 # Cross-refs: genbank:acc:YP_001285579;genbank:gi:148727085;genbank:GeneID:5247051 Probab=98.46 E-value=5.5e-07 Score=54.90 Aligned_cols=373 Identities=12% Similarity=0.081 Sum_probs=162.6 Q ss_pred Cccccccccc----------hhh---hhhhccCcc---CCcccCccchhhHHHHhhhHHHHHHHHHHHHhhccCceEEEE Q lcl|Aclame:pro 9 LSAPAMAELS----------PQM---QDSYYYAPA---VGMQLERQFSLYGGIYKNQPWVRTVIAKRAQALARLPVKCMF 72 (518) Q Consensus 9 ~~~~~~~~~~----------~~~---~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~v~~~v~~ia~~ia~lp~~v~~ 72 (518) .......++. +.. ...+.|... .+....+ .++..-..+.+...+|+..+..+--..|. T Consensus 1 ~~~~~~~~i~~l~~~~~~~~~r~~~l~~Yy~G~~~i~~~~~~~~~---~~~~~k~~~n~~~~ivd~~~~~l~~~g~~--- 74 (441) T protein:vir:80 1 MNSDELALIEGMYDRIQRLSSWHCCIEGYYEGSNRVRDLGVAIPP---ELQRVQTVVSWPGIAVDALEERLDWLGWT--- 74 (441) T ss_pred CCccHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchhcCcccch---hhhhhhhhcchHHHHHHHHHhhhcccccc--- Confidence 1111100000 000 011111100 0111110 11111223345556666665544222221 Q ss_pred ecCCceeeecchHHHHHhhccCccCCHHHHHHHHHHHHHHcCCeeEEeeeCCCCceeeeeeeCCcceEEEeccCcceEE- Q lcl|Aclame:pro 73 TSGDTETEEHDTGYAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQKNKSGTPEKLMPMHPSRVAIKRNSRTGRYE- 151 (518) Q Consensus 73 ~~~~~~~~~~~~~~~~l~~~PN~~~t~~~f~~~~~~~~ll~G~~~~~i~~~~~G~~~~l~~l~p~~v~~~~~~~~~~~~- 151 (518) .. +...+..++.. | +.......+..+++.+|.+|..+..+.+|.+ .+.+++|..+.++++...+... T Consensus 75 ~~-------d~~~l~~i~~~-n---~~~~~~~~~~~~~~~~G~a~~~v~~d~~g~~-~i~~~~p~~~~~i~d~~~~~~~~ 142 (441) T protein:vir:80 75 NG-------DGYGLDGVYAA-N---RLATASCDVHLDALIFGLSFVAIIPHGDGTV-SVRPQSPKNCTGKFSADGSRLDA 142 (441) T ss_pred CC-------ChHHHHHHHHh-c---CHHHHHHHHHHHHhhcCeeEEEEEeCCCCce-EEEEEccceEEEEEeCCCCceeE Confidence 11 11123333332 2 4567777888999999999999988888876 5788899999888775432221 Q ss_pred -EEeeccCCCC---------------------------ceeEEEeeeeeEEeecCCCCcccccchHHHH-HHHHHHHHHH Q lcl|Aclame:pro 152 -YYFQAGAGVG---------------------------TQLVSFADDEVVPIRFFNPDGLERGLSLMES-LKSTIFSEDS 202 (518) Q Consensus 152 -~~~~~~~~~~---------------------------~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~-~~~~i~~~~~ 202 (518) +.+....... .....+..-.|+||.+....+..+|.|.+.. +...++.... T Consensus 143 ~~~~~~~~~~~~~~~~vy~~~~~~~~~~~~~~~~~~~~~~~~~~g~vPvv~~~n~~~~~~~~G~s~l~~~v~~liDa~~~ 222 (441) T protein:vir:80 143 GLVVQQTCDPEVVEAELLLPDVIVQVERRGSREWVEVDRIPNVLGAVPLVPIVNRRRTSRIDGRSEITRSIRAYTDEAVR 222 (441) T ss_pred EEEEEEEecCceEEEEEEecCeEEEEEEcCCcceeeccccccCCCceeEEEeeccccCCccCCcccchhhHHHHHHHHHH Confidence 1110000000 0111122334677776555555678886543 3334444333 Q ss_pred HHHHHHHHHHccCCcceeeeeCCcCCHHHHHHHHHHHHHHhcCccccccceeccCC-----cccccccCChhhHH-HHHH Q lcl|Aclame:pro 203 SRNATAAMWKNAGRPNLVLRHEKRLSPEAQQRLREQFDRAHAGSSNTGKTMVVEEG-----MEPIPLQLTAVEMQ-FIEA 276 (518) Q Consensus 203 ~~~~~~~~~~ng~~p~gil~~~~~~~~e~~~~~~~~~~~~~~g~~n~g~~~vl~~g-----~~~~~~~~~~~d~q-~~e~ 276 (518) ...-.....+-.+.|-.+++ +...++.... .|+. ..+++..++.+ .++..+.. .+++ +++. T Consensus 223 ~~s~~~~~~~~~~~~~~~i~-G~~~~~~~~~----~~~~------~~~~i~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 289 (441) T protein:vir:80 223 TLLGQSVNRDFYAYPQRWVT-GVSADEFSQP----GWVL------SMASVWAVDKDDDGDTPNVGSFPV--NSPTPYSDQ 289 (441) T ss_pred HHHHHHHHHHhhcCceeeee-cCCccccccc----hhhh------cccccccCCCCCCCCcceeEecCc--cchHHHHHH Confidence 33333444444555655553 2222222111 1111 12333444322 33333332 2233 6777 Q ss_pred HHHHHHHHHHHhccchHhhccccccccccHHHHHHHHHHHHHHHHHHHHHHH----HH-------hhhcchh---hccce Q lcl|Aclame:pro 277 RQLNREEVCGVYDIAPPIVHILDRATFSNISAQMRAFYRDTMAIPIARIQSA----MD-------KYVGQYW---VRKNR 342 (518) Q Consensus 277 ~~~~~~~Ia~~fgVpp~~lg~~~~~~~s~~e~~~~~~~~~~l~P~~~~ie~~----ln-------~~l~~~~---~~~~~ 342 (518) ++..+..|+..-++|+..+|...... ++.++.. +....|.-.+...+.. |. ..+.... ..... T Consensus 290 l~~~i~~~~~~~~~p~~~~g~~~~~~-~Sg~Al~--~~~~~l~~k~~~~~~~f~~~l~~~~~l~~~~~~~~~~~~~~~~~ 366 (441) T protein:vir:80 290 MRLLAQLTAGEAAVPERYFGFITSNP-PSGEALA--AEESRLVKRAERRQTSFGQGWLSVGFLAAKALDSRVDEADFFGD 366 (441) T ss_pred HHHHHHHHhcccCCCHHHhccCCCcc-hHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccccccee Confidence 88888999999999999998644321 1122111 1111121112211111 11 1111010 11234 Q ss_pred eeechhhhhccCHHHHHHHHHHHHhCCCcCH--HHHHHHHhCCCCCCccCceeeecccccccccccccCCCCCCCCCCCC Q lcl|Aclame:pro 343 MKFDIDDVIQPDWEAKSESTQKMVNSGVATP--NEGREIMGLPRSDDPKADELYANSALQPLGATPDGAVEGEEAPAPKR 420 (518) Q Consensus 343 ~~fd~~~l~~~d~~~~~~~~~~~~~~g~~T~--NE~R~~~g~~pi~~~~gD~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ 420 (518) +++.+...+..+..+.++.+.+++.+|+++. .-+++.+|+.+-+ -.++.- ..........+.++. T Consensus 367 i~~~f~~~~~~~~~e~ad~~~kl~~~g~~~~s~~~~~~~l~~~~~e---~~~~~~-------e~~e~~~~~~~~~~~--- 433 (441) T protein:vir:80 367 VGLRWRDASTPTRAATADAVTKLVGAGILPADSRTVLEMLGLDDVQ---VEAVMR-------HRAESSDPLAVLAGA--- 433 (441) T ss_pred eeEEeCCCCCcCHHHHHHHHHHHHhcCcccccHHHHHHhCCCCHHH---HHHHHH-------HHHHHHHHHHHHhhh--- Confidence 5666677788899999999999999997643 3467777664321 111100 000000000000000 Q ss_pred cccCCCCCccCCccccccccChhhhcch Q lcl|Aclame:pro 421 PASTPVASLDQSPPASVPGLSPTNSDRS 448 (518) Q Consensus 421 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 448 (518) .++ + .++. T Consensus 434 -~~~-------~------------~~~~ 441 (441) T protein:vir:80 434 -ISR-------Q------------TNEV 441 (441) T ss_pred -hhc-------c------------cccC Confidence 000 0 0000 No 179 >protein:vir:9815 Length: 500 # NCBI annotation: putative minor capsid protein # Family: family:all:898 # MgeID: mge:176 # MgeName: 315.4 # Cross-refs: genbank:acc:NP_795577;genbank:gi:28876344;genbank:GeneID:1257866 Probab=98.46 E-value=5.6e-07 Score=54.86 Aligned_cols=392 Identities=12% Similarity=0.053 Sum_probs=179.0 Q ss_pred CCCCCCCCCcc--ccccccch----hh---hhhhccCccCCcccCccchhhHHHHhhhHHHHHHHHHHHHhhccCceEEE Q lcl|Aclame:pro 1 MLLANGQTLSA--PAMAELSP----QM---QDSYYYAPAVGMQLERQFSLYGGIYKNQPWVRTVIAKRAQALARLPVKCM 71 (518) Q Consensus 1 ~~f~~~~~~~~--~~~~~~~~----~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~v~~ia~~ia~lp~~v~ 71 (518) -||++.-..-. +-. ..++ .+ ...|.+.+..-......................+++..|+-+..-|..+. T Consensus 17 ~~~~~~~~~~~~~~~i-~~~~~~~~~i~~~~~~Y~g~~~~~~~~~~~~~~~~~~~~slnl~~~i~~~~A~lv~~e~~~i~ 95 (500) T protein:vir:98 17 VMTTQSLTNITDHPKI-AISKLEYDRITTNLKYYKSDWDSVLYLNTDGETKKRDLNHLPIARTAAKKIASLVFNEQAEIK 95 (500) T ss_pred Hhhcchhhhhhccccc-cCCHHHHHHHHHHHHHhcCCCCCcccccCCCCcccCceeecchHHHHHHHHhhhhcCCcceEe Confidence 23544322111 111 1111 11 11222211100000000000001111223445666777776666554442 Q ss_pred EecCCceeeecchHHHHHhhccCccCCHHHHHHHHHHHHHHcCCeeEEeeeCCCCceeeeeeeCCcceEEEeccCcce-- Q lcl|Aclame:pro 72 FTSGDTETEEHDTGYAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQKNKSGTPEKLMPMHPSRVAIKRNSRTGR-- 149 (518) Q Consensus 72 ~~~~~~~~~~~~~~~~~l~~~PN~~~t~~~f~~~~~~~~ll~G~~~~~i~~~~~G~~~~l~~l~p~~v~~~~~~~~~~-- 149 (518) -. +......+.+-...-.+..-.+..+.+.+..|.+++.+..+. |. +.+..++|+.+.+.....++. T Consensus 96 ~~---------d~~~~~~l~~il~~n~f~~~~~~~~e~a~a~G~~~~k~~~d~-~~-~~I~~v~ad~~~P~~~d~~~~~~ 164 (500) T protein:vir:98 96 VD---------DDAANEFISETLKNDRFNKNFERYLESCLALGGLAMRPYVDG-DK-VRVAFVQAPVFLPLQSNTQDVSS 164 (500) T ss_pred cC---------ChHHHHHHHHHHhhccHHHHHHHHHHHHhhcCCEEEEEEEeC-Cc-eEEEEEcCCeeEEEEEcCCCeEE Confidence 21 122222232222223345555667777888899988877764 33 335556677666543222111 Q ss_pred ---------------EEEEe----e-ccCCC---------------CceeEE----------------EeeeeeEEeecC Q lcl|Aclame:pro 150 ---------------YEYYF----Q-AGAGV---------------GTQLVS----------------FADDEVVPIRFF 178 (518) Q Consensus 150 ---------------~~~~~----~-~~~~~---------------~~~~~~----------------~~~~~vih~~~~ 178 (518) .+|.. . ..... .|..+. ++..-+.||+.+ T Consensus 165 ~a~~~~~~~~~~~~~~~yt~lE~h~~~~~~~~~I~n~ly~~~~~~~lG~~v~l~~~~~~l~~~~~~~~~~~p~f~~~~~~ 244 (500) T protein:vir:98 165 AAVVIKSVKTINGKEVYYTLIEFHEWQSSDDYVISNELYRSDDKAKVGSRVPLSEVYKDLKDEAKVTDVTRPIFTYLKTP 244 (500) T ss_pred EEEEEEEeeeecCCceEEEEEEEEEEeCCceeEEEEEEEecccccccCcccccccccCCcCcceEeccCCCccEEEecCC Confidence 11100 0 00000 011000 011123455544 Q ss_pred CCC----cccccchHHHHHHHHHHHHHHHHHHHHHHHHccCCcceee-----eeCC-cCCHHHHHHHHHHHH---HHhcC Q lcl|Aclame:pro 179 NPD----GLERGLSLMESLKSTIFSEDSSRNATAAMWKNAGRPNLVL-----RHEK-RLSPEAQQRLREQFD---RAHAG 245 (518) Q Consensus 179 ~~~----~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~p~gil-----~~~~-~~~~e~~~~~~~~~~---~~~~g 245 (518) .++ +.++|+|.+..+...+...........+-|+.|-. ..++ .... ..+.+.... ..|. ..|.. T Consensus 245 ~~N~~~~~sp~G~S~~~~~~~lid~lD~~~s~~~~e~~~g~~-~i~v~~~~l~~~~~~~~g~~~~~--~~~d~~~~~~~~ 321 (500) T protein:vir:98 245 GMNNKDINSPLGLSIFDNAKTTIDFINTTYDEFMWEVKMGQR-RVAVPESLTALTVRTTDGDVVPR--PRFESDQNVYIR 321 (500) T ss_pred ccccccCCCccCCchhhhhHHHHHHHHHHHHHHHHHHHhCcc-eeeechHHhcccCCCCCccccCC--cccCCCcceEEE Confidence 332 34579999999999999988877777778876444 3322 1111 111110000 0010 00100 Q ss_pred ccccccceeccCCcccccccCChhhHHHHHHHHHHHHHHHHHhccchHhhccccccccccHHHH-------------HHH Q lcl|Aclame:pro 246 SSNTGKTMVVEEGMEPIPLQLTAVEMQFIEARQLNREEVCGVYDIAPPIVHILDRATFSNISAQ-------------MRA 312 (518) Q Consensus 246 ~~n~g~~~vl~~g~~~~~~~~~~~d~q~~e~~~~~~~~Ia~~fgVpp~~lg~~~~~~~s~~e~~-------------~~~ 312 (518) .. .-..++..++.++....+-++.+..+...++|+...|+++..+|..+++.. +..+. ... T Consensus 322 ~~-----~~~~~~~~i~~~~~~ir~e~~~~~l~~~l~~i~~~~gls~~~~~~~~~g~~-TAtei~s~~~~~~~t~~~~~~ 395 (500) T protein:vir:98 322 MG-----GRDLDSSAIQDLTTPIRADDYIKAINEGLSLFEMQIGVSAGLFSFDGKSMK-TATEIVSENSDTYQMRNSIVA 395 (500) T ss_pred cC-----CCCCcCcceeEeccccChHHHHHHHHHHHHHHHHHhCCCccccccCcCccc-cHHHHHHHHHHHHHHHHHHHH Confidence 00 001223446666666778889999999999999999999999997655332 22221 122 Q ss_pred HHHHHHHHHHHHHHHHHHh-hhcc-hhhccceeeechhhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHH-hCCCCCCcc Q lcl|Aclame:pro 313 FYRDTMAIPIARIQSAMDK-YVGQ-YWVRKNRMKFDIDDVIQPDWEAKSESTQKMVNSGVATPNEGREIM-GLPRSDDPK 389 (518) Q Consensus 313 ~~~~~l~P~~~~ie~~ln~-~l~~-~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~T~NE~R~~~-g~~pi~~~~ 389 (518) .++.+|.-++..|....+. .+.. .....+.+.|++++-+..|.++.++...+++.+|+|+.-+++.++ |+ +++. T Consensus 396 ~~~~al~~lv~~il~~~~~~~~~~~~~~~~~~v~v~f~d~i~~d~~~~~~~~~~~v~aGi~s~~~~i~~~~g~---~eee 472 (500) T protein:vir:98 396 LVEQSLKELVISIFEIAKAYDLYQSEVPSMDNISISLDDGVFTDRDAELDYWIKVVNAGFGTREMAIQKVLNV---TEEK 472 (500) T ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCCCCCCcceEEEeCCCCCCCHHHHHHHHHHHHHcCCCCHHHHHHhcCCC---CHHH Confidence 3333444444433322211 1111 111234566777787888999999999999999999999988664 43 2223 Q ss_pred CceeeecccccccccccccCCCCCCCCCCCCcc-cCCCCCccC Q lcl|Aclame:pro 390 ADELYANSALQPLGATPDGAVEGEEAPAPKRPA-STPVASLDQ 431 (518) Q Consensus 390 gD~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 431 (518) ..+.+... ... ..+..+.+. .++..+ + T Consensus 473 a~~~l~~i--------~~E-----~~~~~~~~~~~~~~~g--~ 500 (500) T protein:vir:98 473 AQEIAAEI--------NTG-----IVDEINQQRTDTHLYG--E 500 (500) T ss_pred HHHHHHHH--------HHh-----ccccCCCCCccccccC--C Confidence 32221110 000 000000000 000000 0 No 180 >protein:vir:3028 Length: 500 # NCBI annotation: minor capsid protein # Family: family:all:898 # MgeID: mge:61 # MgeName: PhiNIH1.1 # Cross-refs: genbank:acc:NP_438141;genbank:gi:16271804;genbank:GeneID:929241 Probab=98.46 E-value=5.6e-07 Score=54.86 Aligned_cols=392 Identities=12% Similarity=0.053 Sum_probs=179.0 Q ss_pred CCCCCCCCCcc--ccccccch----hh---hhhhccCccCCcccCccchhhHHHHhhhHHHHHHHHHHHHhhccCceEEE Q lcl|Aclame:pro 1 MLLANGQTLSA--PAMAELSP----QM---QDSYYYAPAVGMQLERQFSLYGGIYKNQPWVRTVIAKRAQALARLPVKCM 71 (518) Q Consensus 1 ~~f~~~~~~~~--~~~~~~~~----~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~v~~ia~~ia~lp~~v~ 71 (518) -||++.-..-. +-. ..++ .+ ...|.+.+..-......................+++..|+-+..-|..+. T Consensus 17 ~~~~~~~~~~~~~~~i-~~~~~~~~~i~~~~~~Y~g~~~~~~~~~~~~~~~~~~~~slnl~~~i~~~~A~lv~~e~~~i~ 95 (500) T protein:vir:30 17 VMTTQSLTNITDHPKI-AISKLEYDRITTNLKYYKSDWDSVLYLNTDGETKKRDLNHLPIARTAAKKIASLVFNEQAEIK 95 (500) T ss_pred Hhhcchhhhhhccccc-cCCHHHHHHHHHHHHHhcCCCCCcccccCCCCcccCceeecchHHHHHHHHhhhhcCCcceEe Confidence 23544322111 111 1111 11 11222211100000000000001111223445666777776666554442 Q ss_pred EecCCceeeecchHHHHHhhccCccCCHHHHHHHHHHHHHHcCCeeEEeeeCCCCceeeeeeeCCcceEEEeccCcce-- Q lcl|Aclame:pro 72 FTSGDTETEEHDTGYAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQKNKSGTPEKLMPMHPSRVAIKRNSRTGR-- 149 (518) Q Consensus 72 ~~~~~~~~~~~~~~~~~l~~~PN~~~t~~~f~~~~~~~~ll~G~~~~~i~~~~~G~~~~l~~l~p~~v~~~~~~~~~~-- 149 (518) -. +......+.+-...-.+..-.+..+.+.+..|.+++.+..+. |. +.+..++|+.+.+.....++. T Consensus 96 ~~---------d~~~~~~l~~il~~n~f~~~~~~~~e~a~a~G~~~~k~~~d~-~~-~~I~~v~ad~~~P~~~d~~~~~~ 164 (500) T protein:vir:30 96 VD---------DDAANEFISETLKNDRFNKNFERYLESCLALGGLAMRPYVDG-DK-VRVAFVQAPVFLPLQSNTQDVSS 164 (500) T ss_pred cC---------ChHHHHHHHHHHhhccHHHHHHHHHHHHhhcCCEEEEEEEeC-Cc-eEEEEEcCCeeEEEEEcCCCeEE Confidence 21 122222232222223345555667777888899988877764 33 335556677666543222111 Q ss_pred ---------------EEEEe----e-ccCCC---------------CceeEE----------------EeeeeeEEeecC Q lcl|Aclame:pro 150 ---------------YEYYF----Q-AGAGV---------------GTQLVS----------------FADDEVVPIRFF 178 (518) Q Consensus 150 ---------------~~~~~----~-~~~~~---------------~~~~~~----------------~~~~~vih~~~~ 178 (518) .+|.. . ..... .|..+. ++..-+.||+.+ T Consensus 165 ~a~~~~~~~~~~~~~~~yt~lE~h~~~~~~~~~I~n~ly~~~~~~~lG~~v~l~~~~~~l~~~~~~~~~~~p~f~~~~~~ 244 (500) T protein:vir:30 165 AAVVIKSVKTINGKEVYYTLIEFHEWQSSDDYVISNELYRSDDKAKVGSRVPLSEVYKDLKDEAKVTDVTRPIFTYLKTP 244 (500) T ss_pred EEEEEEEeeeecCCceEEEEEEEEEEeCCceeEEEEEEEecccccccCcccccccccCCcCcceEeccCCCccEEEecCC Confidence 11100 0 00000 011000 011123455544 Q ss_pred CCC----cccccchHHHHHHHHHHHHHHHHHHHHHHHHccCCcceee-----eeCC-cCCHHHHHHHHHHHH---HHhcC Q lcl|Aclame:pro 179 NPD----GLERGLSLMESLKSTIFSEDSSRNATAAMWKNAGRPNLVL-----RHEK-RLSPEAQQRLREQFD---RAHAG 245 (518) Q Consensus 179 ~~~----~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~p~gil-----~~~~-~~~~e~~~~~~~~~~---~~~~g 245 (518) .++ +.++|+|.+..+...+...........+-|+.|-. ..++ .... ..+.+.... ..|. ..|.. T Consensus 245 ~~N~~~~~sp~G~S~~~~~~~lid~lD~~~s~~~~e~~~g~~-~i~v~~~~l~~~~~~~~g~~~~~--~~~d~~~~~~~~ 321 (500) T protein:vir:30 245 GMNNKDINSPLGLSIFDNAKTTIDFINTTYDEFMWEVKMGQR-RVAVPESLTALTVRTTDGDVVPR--PRFESDQNVYIR 321 (500) T ss_pred ccccccCCCccCCchhhhhHHHHHHHHHHHHHHHHHHHhCcc-eeeechHHhcccCCCCCccccCC--cccCCCcceEEE Confidence 332 34579999999999999988877777778876444 3322 1111 111110000 0010 00100 Q ss_pred ccccccceeccCCcccccccCChhhHHHHHHHHHHHHHHHHHhccchHhhccccccccccHHHH-------------HHH Q lcl|Aclame:pro 246 SSNTGKTMVVEEGMEPIPLQLTAVEMQFIEARQLNREEVCGVYDIAPPIVHILDRATFSNISAQ-------------MRA 312 (518) Q Consensus 246 ~~n~g~~~vl~~g~~~~~~~~~~~d~q~~e~~~~~~~~Ia~~fgVpp~~lg~~~~~~~s~~e~~-------------~~~ 312 (518) .. .-..++..++.++....+-++.+..+...++|+...|+++..+|..+++.. +..+. ... T Consensus 322 ~~-----~~~~~~~~i~~~~~~ir~e~~~~~l~~~l~~i~~~~gls~~~~~~~~~g~~-TAtei~s~~~~~~~t~~~~~~ 395 (500) T protein:vir:30 322 MG-----GRDLDSSAIQDLTTPIRADDYIKAINEGLSLFEMQIGVSAGLFSFDGKSMK-TATEIVSENSDTYQMRNSIVA 395 (500) T ss_pred cC-----CCCCcCcceeEeccccChHHHHHHHHHHHHHHHHHhCCCccccccCcCccc-cHHHHHHHHHHHHHHHHHHHH Confidence 00 001223446666666778889999999999999999999999997655332 22221 122 Q ss_pred HHHHHHHHHHHHHHHHHHh-hhcc-hhhccceeeechhhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHH-hCCCCCCcc Q lcl|Aclame:pro 313 FYRDTMAIPIARIQSAMDK-YVGQ-YWVRKNRMKFDIDDVIQPDWEAKSESTQKMVNSGVATPNEGREIM-GLPRSDDPK 389 (518) Q Consensus 313 ~~~~~l~P~~~~ie~~ln~-~l~~-~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~T~NE~R~~~-g~~pi~~~~ 389 (518) .++.+|.-++..|....+. .+.. .....+.+.|++++-+..|.++.++...+++.+|+|+.-+++.++ |+ +++. T Consensus 396 ~~~~al~~lv~~il~~~~~~~~~~~~~~~~~~v~v~f~d~i~~d~~~~~~~~~~~v~aGi~s~~~~i~~~~g~---~eee 472 (500) T protein:vir:30 396 LVEQSLKELVISIFEIAKAYDLYQSEVPSMDNISISLDDGVFTDRDAELDYWIKVVNAGFGTREMAIQKVLNV---TEEK 472 (500) T ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCCCCCCcceEEEeCCCCCCCHHHHHHHHHHHHHcCCCCHHHHHHhcCCC---CHHH Confidence 3333444444433322211 1111 111234566777787888999999999999999999999988664 43 2223 Q ss_pred CceeeecccccccccccccCCCCCCCCCCCCcc-cCCCCCccC Q lcl|Aclame:pro 390 ADELYANSALQPLGATPDGAVEGEEAPAPKRPA-STPVASLDQ 431 (518) Q Consensus 390 gD~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 431 (518) ..+.+... ... ..+..+.+. .++..+ + T Consensus 473 a~~~l~~i--------~~E-----~~~~~~~~~~~~~~~g--~ 500 (500) T protein:vir:30 473 AQEIAAEI--------NTG-----IVDEINQQRTDTHLYG--E 500 (500) T ss_pred HHHHHHHH--------HHh-----ccccCCCCCccccccC--C Confidence 32221110 000 000000000 000000 0 No 181 >protein:vir:95806 Length: 440 # NCBI annotation: portal protein # Family: family:all:125 # MgeID: mge:1578 # MgeName: SMP # Cross-refs: genbank:acc:YP_950583;genbank:gi:119953778;genbank:GeneID:5076876 Probab=98.45 E-value=6.2e-07 Score=54.62 Aligned_cols=392 Identities=11% Similarity=0.021 Sum_probs=172.3 Q ss_pred CCCCCCCCCccccccccchhhhhhhccCccCCcccCccc--hhh-HHHHhhhHHHHHHHHHHHHhhccCceEEEEecCCc Q lcl|Aclame:pro 1 MLLANGQTLSAPAMAELSPQMQDSYYYAPAVGMQLERQF--SLY-GGIYKNQPWVRTVIAKRAQALARLPVKCMFTSGDT 77 (518) Q Consensus 1 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-~~~~~~~~~v~~~v~~ia~~ia~lp~~v~~~~~~~ 77 (518) ||=.... ...+. -..+...+-+... ....+.. ... ...-..++.....|+..+.-+-+-|..+.-.+.+ T Consensus 1 ~~~~~~~-~~~~r----~~~l~~yy~g~~~--~~~~~~~~~~~~~~~~ki~~n~~~~ivd~~~~~l~g~~~~~~~~~~~- 72 (440) T protein:vir:95 1 MLAAFLG-SQKQR----LAILASYAQGDNF--SILSGHRRLDDEKADYRVRHKWGGYISSFATGYVIGNPVSIGVMEGG- 72 (440) T ss_pred ChhhHHH-HHHHH----HHHHHHHhccCCc--ccccccccccccCCcceeecchHHHHHHhhhhheeccCceEeeCCCc- Confidence 2211111 00000 0001111111000 0000000 000 0001234566677787777777777776322211 Q ss_pred eeeecchHHHHHhhccCccCCHHHHHHHHHHHHHHcCCeeEEeeeCCCCceeeeeeeCCcceEEEeccCcc-eEEEEeec Q lcl|Aclame:pro 78 ETEEHDTGYAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQKNKSGTPEKLMPMHPSRVAIKRNSRTG-RYEYYFQA 156 (518) Q Consensus 78 ~~~~~~~~~~~l~~~PN~~~t~~~f~~~~~~~~ll~G~~~~~i~~~~~G~~~~l~~l~p~~v~~~~~~~~~-~~~~~~~~ 156 (518) ... ....+..++. .-........+..+.+.+|.+|..+..+.+|.+ .+..++|..+.+.++.... ...+.+.. T Consensus 73 ~~~-~~~~l~~~~~----~n~~~~~~~~~~~~~~~~G~a~~~~~~d~~~~~-~i~~~~p~~~~~~~d~~~~~~~~~~i~~ 146 (440) T protein:vir:95 73 SAD-QLSTIKDIEW----QNDINALNSDLAFDASVYGRAYEYHFRDKDKVD-RVVLISPLEMFVIRDLTVEQNIIAAVHL 146 (440) T ss_pred cHH-HHHHHHHHHH----hcCHhHHHHHHHHHHhhcCeEEEEEEecCCCce-EEEEEcccceEEEEcCCCCCceEEEEEE Confidence 111 1111222222 123344555677889999999999988888875 4667889999988875432 22111110 Q ss_pred cCCCCceeE-EEee----------------------------eeeEEeecCCCCcccccchHHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 157 GAGVGTQLV-SFAD----------------------------DEVVPIRFFNPDGLERGLSLMESLKSTIFSEDSSRNAT 207 (518) Q Consensus 157 ~~~~~~~~~-~~~~----------------------------~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~ 207 (518) ......... .+.. -.|++|+++ ..|.|-+......++....+.... T Consensus 147 ~~~~~~~~~~vyt~~~~~~~~~~~~~~~~~~~~~~~~~~~g~vPvv~~~n~-----~~g~sd~e~v~~lida~~~~~s~~ 221 (440) T protein:vir:95 147 PIYADKVNMTVYTKDKVITYKPYSNNSVRLVVDDVKKHSYNDVPVVEWWNN-----RFRMGDYESEISLIDAYDAGQSDT 221 (440) T ss_pred EEecCceEEEEEeCCeEEEEEEecCCccceeecceeeccCceeeEEEeeCC-----CCCCCchhhhHHHHHHHHHHHHHH Confidence 000000001 1111 234444432 247777777777777776666666 Q ss_pred HHHHHccCCcceeeeeC---CcCCHHHHHHHHHHHHHHhcCccccccceeccCCcccccccCChhhHHHHHHHHHHHHHH Q lcl|Aclame:pro 208 AAMWKNAGRPNLVLRHE---KRLSPEAQQRLREQFDRAHAGSSNTGKTMVVEEGMEPIPLQLTAVEMQFIEARQLNREEV 284 (518) Q Consensus 208 ~~~~~ng~~p~gil~~~---~~~~~e~~~~~~~~~~~~~~g~~n~g~~~vl~~g~~~~~~~~~~~d~q~~e~~~~~~~~I 284 (518) .+..+..+.|-.+++.. ...+++....+++.-.-.... .......+.+.+...++.......+....+...+.| T Consensus 222 ~~~~~~~~~~~~v~~g~~~~~~~~~e~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~l~~~i 298 (440) T protein:vir:95 222 ANYMSDLNDAMLLVKGDLDGIKLSPEDAAKMKDANMLFLKT---GISTTGQQTTADASYIYKQYDVNGTEAYKNRLANDI 298 (440) T ss_pred HHHHHHhhcceeeeecccccCCCCccchhhhhhccceeccc---ccccccCCCCcceeEEeecCCHHHHHHHHHHHHHHH Confidence 66667777777666542 233455544443322111100 001111222333333433334455667788888999 Q ss_pred HHHhccchHhhcccc-ccccccHH----------HHHHHHHHHHHHHHHHHHHHHHHhhhcchhhccceeeechhhhhcc Q lcl|Aclame:pro 285 CGVYDIAPPIVHILD-RATFSNIS----------AQMRAFYRDTMAIPIARIQSAMDKYVGQYWVRKNRMKFDIDDVIQP 353 (518) Q Consensus 285 a~~fgVpp~~lg~~~-~~~~s~~e----------~~~~~~~~~~l~P~~~~ie~~ln~~l~~~~~~~~~~~fd~~~l~~~ 353 (518) +..-++|..-.+... +.+..-.+ ......+...+.-.++.|...++..-.. ......+++.+..-... T Consensus 299 ~~~s~~p~~~~~~~~~n~Sg~Al~~~~~~l~~k~~~k~~~~~~~l~~~~~li~~~~~~~~~~-~~~~~~v~i~f~~~~p~ 377 (440) T protein:vir:95 299 HRFSRIPNLDDDRFNSTSSGIALLYKMIGLEQVRKDKETYFTKALRRRYELISNIHKAINGP-VIEANKLTFTFHPNIPQ 377 (440) T ss_pred HHHhCCcccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCc-ccccccceEEeCCCCCC Confidence 999999875443221 11111010 1112233333333333333332221111 11223455666677788 Q ss_pred CHHHHHHHHHHHHhCCCcCHHHHHHHHhCCCCCCccCceeeecccccccccccccCCCCCCCCC-CCCcccCCCCCccCC Q lcl|Aclame:pro 354 DWEAKSESTQKMVNSGVATPNEGREIMGLPRSDDPKADELYANSALQPLGATPDGAVEGEEAPA-PKRPASTPVASLDQS 432 (518) Q Consensus 354 d~~~~~~~~~~~~~~g~~T~NE~R~~~g~~pi~~~~gD~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 432 (518) |..+.++.+.++ .|+++..-+.++++.- +.+ ++. ........ ..... ....+.....+.+++ T Consensus 378 ~~~~~ad~~~kl--~g~iS~et~~~~l~~~--d~~--~E~---------~ri~~E~~--~~~~~~~~~~~~~~~~~~~~e 440 (440) T protein:vir:95 378 DVWTEIKAYIEA--GGEISQETLMENASFT--DYK--TEH---------SRILKQGG--SSDLEIGQIVGDADVGQADTE 440 (440) T ss_pred CHHHHHHHHHHH--hccCcHHHHHHhCCCC--CcH--HHH---------HHHHHHHH--HhhhhHHhhccCCCCCCcCCC Confidence 999999999887 5788877777766542 211 111 10000000 00000 000000000000000 No 182 >protein:vir:96240 Length: 511 # NCBI annotation: ORF006 # Family: family:all:125 # MgeID: mge:1607 # MgeName: 69 # Cross-refs: genbank:acc:YP_239567;genbank:gi:66395299;genbank:GeneID:5132789 Probab=98.44 E-value=6.3e-07 Score=54.58 Aligned_cols=414 Identities=10% Similarity=0.046 Sum_probs=177.9 Q ss_pred CCCCCCCCCccccccccchhhhhhhccCccCCcccCccchhh-HHHHhhhHHHHHHHHHHHHhhccCceEEEEecCCcee Q lcl|Aclame:pro 1 MLLANGQTLSAPAMAELSPQMQDSYYYAPAVGMQLERQFSLY-GGIYKNQPWVRTVIAKRAQALARLPVKCMFTSGDTET 79 (518) Q Consensus 1 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~v~~~v~~ia~~ia~lp~~v~~~~~~~~~ 79 (518) +|-... ....+.. ..+...+.+.-..-.......... ...-.........|+..+.-+-+-|+.+...++ T Consensus 48 ~i~~~~-~~~~~r~----~~l~~Yy~g~~~i~~~~~~~~~~~~~~~ki~~n~~k~Iv~~~~~yl~g~p~~~~~~~~---- 118 (511) T protein:vir:96 48 YIEHHM-DYQRPRL----KVLSDYYEGKTKNLVELTRRKEEYMADNRVAHDYASYISDFINGYFLGNPIQYQDDDK---- 118 (511) T ss_pred HHHHHH-HhhHHHH----HHHHHHhcccCccccccCcCcccccCcceeecchHHHHHHHHHhhhccCCceeecCch---- Confidence 111000 0000000 001111111000000000000000 000012355667778888888888887732211 Q ss_pred eecchHHHHHhhccCccCCHHHHHHHHHHHHHHcCCeeEEeeeCCCCceeeeeeeCCcceEEEeccCc-ceEEE---Eee Q lcl|Aclame:pro 80 EEHDTGYAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQKNKSGTPEKLMPMHPSRVAIKRNSRT-GRYEY---YFQ 155 (518) Q Consensus 80 ~~~~~~~~~l~~~PN~~~t~~~f~~~~~~~~ll~G~~~~~i~~~~~G~~~~l~~l~p~~v~~~~~~~~-~~~~~---~~~ 155 (518) .....+..++. .-........+..+++.+|.+|.++..+.+|.+ .+..++|..+.++++... ....+ .|. T Consensus 119 -~~~~~l~~~~~----~n~~~~~~~~~~~~~~i~G~a~~~vy~ded~~~-~i~~~~p~~~~~vydd~~~~~~~~~vr~~~ 192 (511) T protein:vir:96 119 -DVLEAIEAFND----LNDVESHNRSLGLDLSIYGKAYELMIRNQDDET-RLYKSDAMSTFVIYDNTIERNSIAGVRYLR 192 (511) T ss_pred -HHHHHHHHHHh----hcCHHHHHHHHHHHHHhcCeeEEEEEeCCCCce-EEEEEccceeEEEEcCCCCCceEEEEEEEE Confidence 11122333333 234555667788899999999999988888764 577788999888876532 11111 111 Q ss_pred c--cCCCCce---eE-EEeeeeeEEeecCCC-------------------------CcccccchHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 156 A--GAGVGTQ---LV-SFADDEVVPIRFFNP-------------------------DGLERGLSLMESLKSTIFSEDSSR 204 (518) Q Consensus 156 ~--~~~~~~~---~~-~~~~~~vih~~~~~~-------------------------~~~~~G~s~~~~~~~~i~~~~~~~ 204 (518) . ....... .+ .+.+..+.++..... .+...|.|.+..+...++....+. T Consensus 193 ~~~~d~~~~~~~~~~~iyt~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~vPvv~~~nn~~g~gd~e~v~~liDa~d~~~ 272 (511) T protein:vir:96 193 TKPIDKTDEDEVFTVDLFTSHGVYRYLTSRTNGLKLTPRENGFESHSFERMPITEFSNNERRKGDYEKVITLIDLYDNAE 272 (511) T ss_pred eeeccccccceEEEEEEEeCCcEEEEEecCCCcccccccccccccccCCceeeEEecCCCCCCCchhhhHHHHHHHHHHH Confidence 0 0000000 01 122233333211000 001257888888888888777766 Q ss_pred HHHHHHHHccCCcceeeeeCCcCCHHHHHHHHHHHHHHhcCccc-cccceeccCCcccccccCChhhHHHHHHHHHHHHH Q lcl|Aclame:pro 205 NATAAMWKNAGRPNLVLRHEKRLSPEAQQRLREQFDRAHAGSSN-TGKTMVVEEGMEPIPLQLTAVEMQFIEARQLNREE 283 (518) Q Consensus 205 ~~~~~~~~ng~~p~gil~~~~~~~~e~~~~~~~~~~~~~~g~~n-~g~~~vl~~g~~~~~~~~~~~d~q~~e~~~~~~~~ 283 (518) .-..+.+...+.|-.+++-....+.++.....+.-.-....... .+...-..++.++..++.......+....+...+. T Consensus 273 S~~~~~~~~~~~~~lv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~e~~~~~L~~~ 352 (511) T protein:vir:96 273 SDTANYMSDLNDAMLLIKGNLNLDPVEVRKQKEANVLFLEPTVYADSEGRETEGSVDGGYIYKQYDVQGTEAYKDRLNSD 352 (511) T ss_pred HHHHHHHHHhhCceeeeecCccCCchhhcccccccceecccccccccccccCCCCcceeEEeecCCHHHHHHHHHHHHHH Confidence 66677777777777666554444433332221111100000000 00111123344555555444556667778888899 Q ss_pred HHHHhccchHhhccccccccccHH------------HHHHHHHHHHHHHHHHHHHHHHHhhhcchhh-ccceeeechhhh Q lcl|Aclame:pro 284 VCGVYDIAPPIVHILDRATFSNIS------------AQMRAFYRDTMAIPIARIQSAMDKYVGQYWV-RKNRMKFDIDDV 350 (518) Q Consensus 284 Ia~~fgVpp~~lg~~~~~~~s~~e------------~~~~~~~~~~l~P~~~~ie~~ln~~l~~~~~-~~~~~~fd~~~l 350 (518) |...-++|..-.+... ++-|... ......+..+|.-.++.|...+...-..... ....+++.+..- T Consensus 353 I~~~s~~p~~~~~~~~-~n~Sg~Al~~~~~~l~~k~~~k~~~~~~~l~~~~~li~~~~~~~~~~~~~~d~~~i~~~f~~~ 431 (511) T protein:vir:96 353 IHMFTNTPNMKDDNFS-GTQSGEAMKYKLFGLEQRTKTKEGLFTKGLRRRAKLLETILKNTWSIDANKDFNTVRYVYNRN 431 (511) T ss_pred HHHHhCCccccccccc-ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcccccccccceEEeCCC Confidence 9999999875443221 1111111 1112333333333333333333221111111 112345556677 Q ss_pred hccCHHHHHHHHHHHHhCCCcCHHHHHHHHhCCCCCCccCceeeecccccccccccccCCCCCCCCCCCCcccCCCCCcc Q lcl|Aclame:pro 351 IQPDWEAKSESTQKMVNSGVATPNEGREIMGLPRSDDPKADELYANSALQPLGATPDGAVEGEEAPAPKRPASTPVASLD 430 (518) Q Consensus 351 ~~~d~~~~~~~~~~~~~~g~~T~NE~R~~~g~~pi~~~~gD~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 430 (518) +..|..+.++.+.++ .|+++..-+.+.+++- +++.. ++ .-+.................++. ..+++ T Consensus 432 ~p~n~~e~~~~~~kl--~G~iS~et~l~~l~~v--~D~~~-E~------~ri~~E~~~~~~~~~~~~~~~~~---~~~~~ 497 (511) T protein:vir:96 432 LPKSLIEELKAYIDS--GGKISQTTLMSLFSFF--QDPEL-EV------KKIEEDEKESIKKAQKGIYKDPR---DINDD 497 (511) T ss_pred CCCCHHHHHHHHHHH--hccCChHHHHHhCCCC--CCHHH-HH------HHHHHHHHHHHHHHhhccccCCC---CCCCC Confidence 788999999998887 5889998888877542 22211 10 00000000000000000000000 00000 Q ss_pred CCccccccccChhhhc Q lcl|Aclame:pro 431 QSPPASVPGLSPTNSD 446 (518) Q Consensus 431 ~~~~~~~~~~~~~~~~ 446 (518) +. ++..+..+.+.+ T Consensus 498 ~~--~~~~~~~~~~~~ 511 (511) T protein:vir:96 498 EQ--DDDTKDTVDKKE 511 (511) T ss_pred CC--CCcccccccccC Confidence 00 000001111101 No 183 >protein:vir:9751 Length: 422 # NCBI annotation: putative structural protein # Family: family:all:524 # MgeID: mge:175 # MgeName: 315.3 # Cross-refs: genbank:acc:NP_795513;genbank:gi:28876291;genbank:GeneID:1257832 Probab=98.42 E-value=7.2e-07 Score=54.26 Aligned_cols=357 Identities=10% Similarity=0.081 Sum_probs=156.2 Q ss_pred Cccccccccc----------hhhhhhhccCcc---CCcccCccchhhHHHH-hhhHHHHHHHHHHHHhhccCceEEEEec Q lcl|Aclame:pro 9 LSAPAMAELS----------PQMQDSYYYAPA---VGMQLERQFSLYGGIY-KNQPWVRTVIAKRAQALARLPVKCMFTS 74 (518) Q Consensus 9 ~~~~~~~~~~----------~~~~~~~~~~~~---~~~~~~~~~~~~~~~~-~~~~~v~~~v~~ia~~ia~lp~~v~~~~ 74 (518) ....+...+. ..+...+.+... .+..+. ..+...+ ....+..-+|+.+++.+.=-.|.+ T Consensus 1 m~~~~i~~L~~~~~~~~~r~~~~~~yy~g~~~~~~~~~~~p---~~~~~~~~~v~nw~~~~Vd~~a~rl~~~Gf~~---- 73 (422) T protein:vir:97 1 MNYMGMGYLRRKLALFKTGVDKRYRYYAMDDRDDTRSIVMP---NNVREMYRSVLEWTAKGVDSLADRIIFREFTN---- 73 (422) T ss_pred CChHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhcCcccc---HHHHHHHHhhcchhHHHHHHHHhccccceeeC---- Confidence 0000000000 001111111110 111111 1111221 112455666676665333233321 Q ss_pred CCceeeecchHHHHHhhccCccCCHHHHHHHHHHHHHHcCCeeEEeeeCC-CCceeeeeeeCCcceEEEeccCcceEEEE Q lcl|Aclame:pro 75 GDTETEEHDTGYAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQKNK-SGTPEKLMPMHPSRVAIKRNSRTGRYEYY 153 (518) Q Consensus 75 ~~~~~~~~~~~~~~l~~~PN~~~t~~~f~~~~~~~~ll~G~~~~~i~~~~-~G~~~~l~~l~p~~v~~~~~~~~~~~~~~ 153 (518) .+..++.++.+ |.. ......+..+.+++|.+|+.+..+. +|.+ .+.+++|..+...+|+..+.+... T Consensus 74 -------~d~~l~~~w~~-N~l---d~~~~~~~~~al~~G~sf~~v~~~~~~~~p-~i~~~sp~~~~~i~D~~~~~~~~a 141 (422) T protein:vir:97 74 -------DDFNAWEIFKA-NNP---DIFFDTAIQSALIASCCFVYIMPGAEDGLP-KMQVIEASKATGILDPTTFLLTEG 141 (422) T ss_pred -------CchhHHHHHHh-cCh---HHHHHHHHHHHHHhcceeEEEeeCCCCCee-EEEEechhhEEEEEeCCCCcceee Confidence 11223444433 332 3344567788899999999987764 4654 588889999998887654433221 Q ss_pred ee--ccCCCCce--eEEE---------------------eeeeeEEeecCCCCcccccchHH-HHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 154 FQ--AGAGVGTQ--LVSF---------------------ADDEVVPIRFFNPDGLERGLSLM-ESLKSTIFSEDSSRNAT 207 (518) Q Consensus 154 ~~--~~~~~~~~--~~~~---------------------~~~~vih~~~~~~~~~~~G~s~~-~~~~~~i~~~~~~~~~~ 207 (518) +. ..+..+.. ...+ ..-.|++|.+....+..+|.|.+ +.+...++......-.. T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~vPvv~~~n~~~~~~~~G~s~I~e~v~~l~da~~r~~~~~ 221 (422) T protein:vir:97 142 YAILESDSNGNPTLEAYFTDKDIWYYPKKGKPYNIKNPTGHPLLVPIIHRPDAVRPFGRSRITKAGMYHQKAAKRTLERA 221 (422) T ss_pred EEEEEecCCCcEEEEEEEcCceEEEEcCCCccccccCCCCCcceEEecccCCCccccCccccchhHHHHHHHHHHHHHHH Confidence 11 11111110 0111 11235666655444556788865 33333333333332222 Q ss_pred HHHHHccCCcceeee-eCCcCCHHHHHHHHHHHHHHhcCccccccceeccC-----CcccccccCChhhHHHHHHHHHHH Q lcl|Aclame:pro 208 AAMWKNAGRPNLVLR-HEKRLSPEAQQRLREQFDRAHAGSSNTGKTMVVEE-----GMEPIPLQLTAVEMQFIEARQLNR 281 (518) Q Consensus 208 ~~~~~ng~~p~gil~-~~~~~~~e~~~~~~~~~~~~~~g~~n~g~~~vl~~-----g~~~~~~~~~~~d~q~~e~~~~~~ 281 (518) ....+=.+.|.-++. .+. +....+ .|+.. .++++.++. +.++..+..+.-+ .|++.++..+ T Consensus 222 ~~~~e~~a~pqr~i~G~d~--d~~~~~----~~~~~------~~~i~~~~~de~~~~~~v~q~~~~~l~-~~~~~l~~~~ 288 (422) T protein:vir:97 222 EVTAEFYSFPQKYVLGMDP--DAKPME----KWRAT------VSTLLEISKDEDGDKPTVGQFTTASMA-PFMEHLKMYA 288 (422) T ss_pred HHHHHHhcchhhhhcccCc--ccccCc----hhhhh------hhhhhccCCCCCCCcceeeecCCCChh-HHHHHHHHHH Confidence 222333334443332 221 111122 22221 123444432 2444444333222 3889999999 Q ss_pred HHHHHHhccchHhhccccccccccHHH---HHHHHHHHHHHHHHHHHHHHHHhh------hcchhh----ccceeeechh Q lcl|Aclame:pro 282 EEVCGVYDIAPPIVHILDRATFSNISA---QMRAFYRDTMAIPIARIQSAMDKY------VGQYWV----RKNRMKFDID 348 (518) Q Consensus 282 ~~Ia~~fgVpp~~lg~~~~~~~s~~e~---~~~~~~~~~l~P~~~~ie~~ln~~------l~~~~~----~~~~~~fd~~ 348 (518) ..|+.+=++|++.+|.... |-++.++ +...+... ..--.+.+.+.+.+. +..... ....+++.+. T Consensus 289 ~~~a~~s~lP~~~lg~~~~-NpsSa~Ai~a~~~~L~~k-a~~k~~~fg~~l~~~~rla~~~~~~~~~~~~~~~~~~~~w~ 366 (422) T protein:vir:97 289 SLFAGGSGLTLDDLGFPSD-NPSSVESIKAAHENLRAA-GRKAQRSFSSGFLNVAYIAVCLRDEFPYLRNQFMDTVIKWE 366 (422) T ss_pred HHHhcccCCCHHHhccccC-chhHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhcCCcccchhhccceEEEc Confidence 9999999999999997543 2122222 11111111 111111222222211 111000 1112334444 Q ss_pred hhhccC---HHHHHHHHHHHHhC--CCcCHHHHHHHHhCCCCCCccCceeeecccccccccccccCCCC Q lcl|Aclame:pro 349 DVIQPD---WEAKSESTQKMVNS--GVATPNEGREIMGLPRSDDPKADELYANSALQPLGATPDGAVEG 412 (518) Q Consensus 349 ~l~~~d---~~~~~~~~~~~~~~--g~~T~NE~R~~~g~~pi~~~~gD~~~~~~n~~~~~~~~~~~~~~ 412 (518) .....| ..+.++.+.+++.+ |++..+-+++++|+...+. -.. . +... ...+ T Consensus 367 p~~~~~~~s~a~~aDa~~Kl~~a~~~~~~~~~~~~~lg~~~~~~-----~~~--~---~~~~---~~d~ 422 (422) T protein:vir:97 367 PLFEADANMLTLVGDGAIKLNQAIPGFMDADVIRDLTGVKGADK-----PIP--A---ITEV---TTDG 422 (422) T ss_pred cCCCCChHHHHHHHHHHHHHHhhccccccHHHHHHHcCCCchhH-----HHH--H---HHhh---hccC Confidence 444455 34456667777777 7788888999999964321 000 0 0100 0000 No 184 >protein:vir:97171 Length: 512 # NCBI annotation: ORF006 # Family: family:all:125 # MgeID: mge:1654 # MgeName: 85 # Cross-refs: genbank:acc:YP_239722;genbank:gi:66394876;genbank:GeneID:5130904 Probab=98.41 E-value=7.9e-07 Score=54.02 Aligned_cols=413 Identities=10% Similarity=0.048 Sum_probs=176.9 Q ss_pred CCCCCCCCCccccccccchhhhhhhccCccCCcccCccchhh-HHHHhhhHHHHHHHHHHHHhhccCceEEEEecCCcee Q lcl|Aclame:pro 1 MLLANGQTLSAPAMAELSPQMQDSYYYAPAVGMQLERQFSLY-GGIYKNQPWVRTVIAKRAQALARLPVKCMFTSGDTET 79 (518) Q Consensus 1 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~v~~~v~~ia~~ia~lp~~v~~~~~~~~~ 79 (518) +|-.. .....+... -+...+.+-...-.......... ...-...+.....|+..+.-+.+-|+.+-..++ T Consensus 48 ~i~~~-~~~~~~r~~----~l~~YY~g~~~i~~~~~~~~~~~~~~~ki~~n~~k~Ivd~~~~yl~g~p~~~~~~d~---- 118 (512) T protein:vir:97 48 YIEHH-MDYQRPRLK----VLSDYYEGKTKNLVELTRRKEEYMADNRVAHDYASYISDFINGYFLGNPIQCQDDDK---- 118 (512) T ss_pred HHHHH-HHhhHHHHH----HHHHHhcccCccccccCcccccccCcceeecchHHHHHHHHhhhhcccCceeccCCh---- Confidence 00000 000000000 01111111000000000000000 000012345667788888888888877632211 Q ss_pred eecchHHHHHhhccCccCCHHHHHHHHHHHHHHcCCeeEEeeeCCCCceeeeeeeCCcceEEEeccCc-ceEEEE--e-e Q lcl|Aclame:pro 80 EEHDTGYAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQKNKSGTPEKLMPMHPSRVAIKRNSRT-GRYEYY--F-Q 155 (518) Q Consensus 80 ~~~~~~~~~l~~~PN~~~t~~~f~~~~~~~~ll~G~~~~~i~~~~~G~~~~l~~l~p~~v~~~~~~~~-~~~~~~--~-~ 155 (518) .....+..++. .-........+..+++.+|.+|.++..+.+|.+ .+..++|..+.++++... ....+. | . T Consensus 119 -~~~~~l~~~~~----~n~~~~~~~~~~~~~~i~G~ay~~vy~ded~~~-~i~~~~p~~~~~iyd~~~~~~~~~~vr~~~ 192 (512) T protein:vir:97 119 -DVLEAIEAFND----LNDVESHNRSLGLDLSIYGKAYELMIRNQDDET-RLYKSDAMSTFVIYDNTIERNSIAGVRYLR 192 (512) T ss_pred -HHHHHHHHHHh----hcCHHHHHHHHHHHHHhcCeEEEEEEeCCCCce-EEEEEcccceEEEEcCCCCCceEEEEEEEE Confidence 11122333332 234455666788889999999999988888864 578889999988887542 111111 1 1 Q ss_pred c--cCCCC---ceeE-EEeeeeeEEeecCC----------------C---------CcccccchHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 156 A--GAGVG---TQLV-SFADDEVVPIRFFN----------------P---------DGLERGLSLMESLKSTIFSEDSSR 204 (518) Q Consensus 156 ~--~~~~~---~~~~-~~~~~~vih~~~~~----------------~---------~~~~~G~s~~~~~~~~i~~~~~~~ 204 (518) . ..... .... .+.+..+.+++... + .+...|.|.+..+...++....+. T Consensus 193 ~~~~~~~~~~~~~~~~vyt~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~vPvv~~~nn~~~~gd~e~v~~liDa~d~~~ 272 (512) T protein:vir:97 193 TKPIDKTDEDEVFTVDLFTSHGVYRYLTSRTNGLKLTPRENGFESHSFERMPITEFSNNERRKGDYEKVITLIDLYDNAE 272 (512) T ss_pred eeeccccccceEEEEEEEeCCcEEEEEecCCCcccccccccccccccCcccceEeecCCCCCCCchhhhHHHHHHHHHHH Confidence 0 00000 0011 22333333332110 0 011357888888888888877776 Q ss_pred HHHHHHHHccCCcceeeeeCCcCCHHHHHHHHHHHHHHhcCcccccc--ceeccCCcccccccCChhhHHHHHHHHHHHH Q lcl|Aclame:pro 205 NATAAMWKNAGRPNLVLRHEKRLSPEAQQRLREQFDRAHAGSSNTGK--TMVVEEGMEPIPLQLTAVEMQFIEARQLNRE 282 (518) Q Consensus 205 ~~~~~~~~ng~~p~gil~~~~~~~~e~~~~~~~~~~~~~~g~~n~g~--~~vl~~g~~~~~~~~~~~d~q~~e~~~~~~~ 282 (518) .-..+.+...+.|-.+++.....+.+.....+....-........+. ..-.++|.++..++.......+....+...+ T Consensus 273 S~~~~~~~~~~~~~lv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~e~~~~~L~~ 352 (512) T protein:vir:97 273 SDTANYMSDLNDAMLLIKGNLNLDPVEVRKQKEANVLFLEPTVYENRDTGIETEGSVDGGYIYKQYDVQGTEAYKDRLNS 352 (512) T ss_pred HHHHHHHHHhcCceeeeecCccCCchhhhhhhhcccccccccchhhcccccCCCCCcceEEEeecCCHHHHHHHHHHHHH Confidence 66677777777777776554444444433333222211111111111 1112445555555544455556677788888 Q ss_pred HHHHHhccchHhhccccccccccHHHH-------------HHHHHHHHHHHHHHHHHHHHHhhhcchh-hccceeeechh Q lcl|Aclame:pro 283 EVCGVYDIAPPIVHILDRATFSNISAQ-------------MRAFYRDTMAIPIARIQSAMDKYVGQYW-VRKNRMKFDID 348 (518) Q Consensus 283 ~Ia~~fgVpp~~lg~~~~~~~s~~e~~-------------~~~~~~~~l~P~~~~ie~~ln~~l~~~~-~~~~~~~fd~~ 348 (518) .|+..-++|..-.+... ++- +..+. ....+..+|.-.++.|...+...-.... .....+++.+. T Consensus 353 ~I~~~s~~p~~~~~~~~-gn~-Sg~Al~~~~~~l~~ka~~k~~~f~~~l~~~~~li~~~~~~~~~~~~~~d~~~i~~~f~ 430 (512) T protein:vir:97 353 DIHMFTNTPNMKDDNFS-GTQ-SGEAMKYKLFGLEQRTKTKEGLFTKGLRRRAKLLETILKNTRSIDANKDFNTVRYVYN 430 (512) T ss_pred HHHHHhCCcccCccccc-ccc-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccccceEEeC Confidence 99988888875544222 111 11111 1122222222222222222221110000 01113455556 Q ss_pred hhhccCHHHHHHHHHHHHhCCCcCHHHHHHHHhCCCCCCccCceeeecccccccccccccCCCCCCCCCCCCcccCCCCC Q lcl|Aclame:pro 349 DVIQPDWEAKSESTQKMVNSGVATPNEGREIMGLPRSDDPKADELYANSALQPLGATPDGAVEGEEAPAPKRPASTPVAS 428 (518) Q Consensus 349 ~l~~~d~~~~~~~~~~~~~~g~~T~NE~R~~~g~~pi~~~~gD~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 428 (518) .-+..|..+.++.+.++. |+++..-+.+++++ ++++... + .-+.............+...++. ..+ T Consensus 431 ~~~p~~~~e~~~~~~kl~--giiS~et~~~~l~~--v~d~~~E-~------eri~~E~~~~~~~~~~~~~~~~~---~~~ 496 (512) T protein:vir:97 431 RNLPKSLIEELKAYIDSG--GKISQTTLMSLFSF--FQDPELE-V------KKIEEDEKESIKKAQKGIYKDPR---DIN 496 (512) T ss_pred CCCCcCHHHHHHHHHHHh--ccCchHHHHHhCCC--CCCHHHH-H------HHHHHHHHHHHHHHhhcccCCCC---CCC Confidence 667788888898888884 78998777887754 3322111 0 00000000000000000000000 000 Q ss_pred ccCCccccccccChhhhc Q lcl|Aclame:pro 429 LDQSPPASVPGLSPTNSD 446 (518) Q Consensus 429 ~~~~~~~~~~~~~~~~~~ 446 (518) .++. ++..+..+.+.+ T Consensus 497 ~~~~--~~~~~~~~~~~~ 512 (512) T protein:vir:97 497 DDEQ--DDDTKDTVDKKE 512 (512) T ss_pred CCCC--CCCccccccccC Confidence 0000 000000001000 No 185 >protein:vir:103219 Length: 201 # NCBI annotation: hypothetical protein # Family: family:all:297 # MgeID: mge:1605 # MgeName: JK06 # Cross-refs: genbank:acc:YP_277473;genbank:gi:71834115;genbank:GeneID:3562330 Probab=98.40 E-value=2.1e-08 Score=62.73 Aligned_cols=181 Identities=12% Similarity=0.102 Sum_probs=89.3 Q ss_pred eeeeCC-----cCCHHHHHHHHHHHHHHhcCccccccceeccCCcccccccCChhhHHHHHHHHHHHHHHHHHhccchHh Q lcl|Aclame:pro 220 VLRHEK-----RLSPEAQQRLREQFDRAHAGSSNTGKTMVVEEGMEPIPLQLTAVEMQFIEARQLNREEVCGVYDIAPPI 294 (518) Q Consensus 220 il~~~~-----~~~~e~~~~~~~~~~~~~~g~~n~g~~~vl~~g~~~~~~~~~~~d~q~~e~~~~~~~~Ia~~fgVpp~~ 294 (518) |+++++ .....+..+..+.+ ..+.+ +.+.+.+...+-+|..++.+... +.+........||.+-+||... T Consensus 1 V~k~~~l~~~~~~~~~~~~~r~~~~-~~~~~--~~~~~~ld~~~e~~e~~~~~lsG--l~d~l~~~~~~iaa~s~iP~t~ 75 (201) T protein:vir:10 1 MWKAKGLADLCDDSDGAARLRLAQV-DNNSG--VGQAIGIDADSEEYNVLNSDIGG--IDTFLSQKFDRIVALSGIHEII 75 (201) T ss_pred CccchHHHHHhcCChHHHHHHHHHH-HHhhh--hhhhheeecCCcceeeeecCcCC--hHHHHHHHHHHHHhHhcCchhh Confidence 444332 11122222222222 33333 23445566566778777766554 4456677778999999999976 Q ss_pred hcccccccc-ccHHHHHHHHHH-------HHHHHHHHHHHHHHHhhhcchhhccceeeechhhhhccCHHHHHHH----- Q lcl|Aclame:pro 295 VHILDRATF-SNISAQMRAFYR-------DTMAIPIARIQSAMDKYVGQYWVRKNRMKFDIDDVIQPDWEAKSES----- 361 (518) Q Consensus 295 lg~~~~~~~-s~~e~~~~~~~~-------~~l~P~~~~ie~~ln~~l~~~~~~~~~~~fd~~~l~~~d~~~~~~~----- 361 (518) |-..+.+.. ++.+.-...||. ..++|.++++-+.+ ...-.+.|.+.+|...+.++++++ T Consensus 76 LfG~sp~Glnatge~d~~nyyd~i~~~Qe~~l~p~le~l~~~~--------~~~~~~~~~f~pL~~~s~kekAei~~~~a 147 (201) T protein:vir:10 76 LKGKNVGGVSASQNTALETFYGYVDRKRKAELLPLLEFLLPFI--------VTEQEWSVEFNPLSQVSDKDKSEILEKNV 147 (201) T ss_pred hcCCCCccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhh--------cCCCCceEeeCCCCCCCHHHHHHHHHHHH Confidence 544333333 334444444443 44556555444321 112234555667777776666655 Q ss_pred --HHHHHhCCCcCHHHHHHHHhCCCCCCccCceeeecccccccccccccCCCCCCCCCCCCcccCCCCCccCCccccccc Q lcl|Aclame:pro 362 --TQKMVNSGVATPNEGREIMGLPRSDDPKADELYANSALQPLGATPDGAVEGEEAPAPKRPASTPVASLDQSPPASVPG 439 (518) Q Consensus 362 --~~~~~~~g~~T~NE~R~~~g~~pi~~~~gD~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 439 (518) +++++++|+++++|+|+.|--.+.. .+++.+.+..+. ...... .|.+.+ . T Consensus 148 ~a~~~~~~~g~i~~~e~r~~L~~~~~~------~~~~~~~~~~~~-----~~~e~~----dp~~~~-------------~ 199 (201) T protein:vir:10 148 NSVAALIAAGIIDADEARDTLRAISTE------VKIGEGSIQTEV-----VINESE----DPLDVS-------------A 199 (201) T ss_pred HHHHHHHHcCCCCHHHHHHHHHhcCCc------CCCCCCCCCccc-----cccccC----CCCCCC-------------C Confidence 5567899999999999998654332 112111111000 000000 000000 0 Q ss_pred cC Q lcl|Aclame:pro 440 LS 441 (518) Q Consensus 440 ~~ 441 (518) ++ T Consensus 200 ~~ 201 (201) T protein:vir:10 200 NN 201 (201) T ss_pred CC Confidence 00 No 186 >protein:vir:106639 Length: 481 # NCBI annotation: ORF003 # Family: family:all:125 # MgeID: mge:1557 # MgeName: 187 # Cross-refs: genbank:acc:YP_239490;genbank:gi:66395218;genbank:GeneID:4555793 Probab=98.36 E-value=1e-06 Score=53.37 Aligned_cols=398 Identities=10% Similarity=0.031 Sum_probs=170.2 Q ss_pred CCCCCCCCCcc-----ccccccchhhhhhhccCccC---CcccCccchhhHHHHhhhHHHHHHHHHHHHhhccCceEEEE Q lcl|Aclame:pro 1 MLLANGQTLSA-----PAMAELSPQMQDSYYYAPAV---GMQLERQFSLYGGIYKNQPWVRTVIAKRAQALARLPVKCMF 72 (518) Q Consensus 1 ~~f~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~v~~~v~~ia~~ia~lp~~v~~ 72 (518) +++-...-... ......-..+...+.+.... ..............-..++....+|+..+.-+.+-|+.+.. T Consensus 28 ~~~~~~~i~~~i~~~~~~~~~~~~~~~~yY~g~~~~i~~~~~~~~~~~~~~~~ki~~n~~~~ivd~~~~~l~g~~~~~~~ 107 (481) T protein:vir:10 28 ELLKEENLRNFISRHQTEQVPRLEMLESYYLNRNTDILAGERRLQKYGDKADHRAVHNYAKYVSRFIVGYLTGNPITITH 107 (481) T ss_pred hhcCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcccccCccccccccccccceeecchHHHHHHHHHhhhccCCceEec Confidence 11111000000 00000000011111111000 00000000000000123456677888888888788876543 Q ss_pred ecCCceeeecchHHHHHhhccCccCCHHHHHHHHHHHHHHcCCeeEEeeeCCCCceeeeeeeCCcceEEEeccCc-ceEE Q lcl|Aclame:pro 73 TSGDTETEEHDTGYAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQKNKSGTPEKLMPMHPSRVAIKRNSRT-GRYE 151 (518) Q Consensus 73 ~~~~~~~~~~~~~~~~l~~~PN~~~t~~~f~~~~~~~~ll~G~~~~~i~~~~~G~~~~l~~l~p~~v~~~~~~~~-~~~~ 151 (518) .++ .....+..++.+ .....+...+..+.+.+|.+|+.+..+.+|.+ .+..++|..+.+.++... .... T Consensus 108 ~d~-----~~~~~l~~~~~~----n~~~~~~~~~~~~~~~~G~~~~~~~~d~dg~~-~i~~~~p~~~~~v~d~~~~~~~~ 177 (481) T protein:vir:10 108 QDN-----QTNDKIIELNDL----NDADEVNSDLALNLSIYGRAYEIVYRDFEDRD-TFKVLDPKSTFVVYDQTLDKKVV 177 (481) T ss_pred CCh-----hHHHHHHHHHHh----cChhHHHHHHHHHHHhcCeEEEEEEeCCCCeE-EEEEEcccceEEEEcCCCCCceE Confidence 221 112234444443 23556777888999999999999988888875 577789998888876543 1111 Q ss_pred E---EeeccCCCCc--ee-EEEeeee-------------------------eEEeecCCCCcccccchHHHHHHHHHHHH Q lcl|Aclame:pro 152 Y---YFQAGAGVGT--QL-VSFADDE-------------------------VVPIRFFNPDGLERGLSLMESLKSTIFSE 200 (518) Q Consensus 152 ~---~~~~~~~~~~--~~-~~~~~~~-------------------------vih~~~~~~~~~~~G~s~~~~~~~~i~~~ 200 (518) + .|......++ .. ..+.+.. |+||+. ..+|.|.+..+...++.. T Consensus 178 ~~i~~~~~~~~~~~~~~~~~~y~~~~i~~~~~~~~~~~~~~~~~~~~g~vPvv~~~n-----~~~g~~~~~~v~~lida~ 252 (481) T protein:vir:10 178 AGVRYFEKQDKDKVPVQHVEVYTTDKIYYIEIKGGTYHRVEEVEHYYNDVPIIEYLN-----DQFKQGDFENVIALIDLY 252 (481) T ss_pred EEEEEEEEeeCCCceEEEEEEEecCeEEEEEecCCceeecccccccCCceeEEEeec-----CCCCCCchhhHHHHHHHH Confidence 1 1111111110 01 1122233 333332 134777777666666655 Q ss_pred HHHHHHHHHHHHccCCcceeeeeCCcCCHHHHHHHHHHHHHHhcCcccccccee--ccCCcccccccCChhhHHHHHHHH Q lcl|Aclame:pro 201 DSSRNATAAMWKNAGRPNLVLRHEKRLSPEAQQRLREQFDRAHAGSSNTGKTMV--VEEGMEPIPLQLTAVEMQFIEARQ 278 (518) Q Consensus 201 ~~~~~~~~~~~~ng~~p~gil~~~~~~~~e~~~~~~~~~~~~~~g~~n~g~~~v--l~~g~~~~~~~~~~~d~q~~e~~~ 278 (518) .....-..+.+.-.+.|..++......+++....++..-. ... ..+... .+++.++..++.......+.+..+ T Consensus 253 ~~~~s~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~--~~~---~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 327 (481) T protein:vir:10 253 DSAQSDTANYMTDLNDAMLAIIGNVDLDSEDAKAFRDANM--IHL---EPGTNANGSEGKAEVKYVYKQYDVAGVEAYKK 327 (481) T ss_pred HHHHHHHHHHHHHhcCceeEeecCcCCCccchhhhhhccc--eec---cccccccCCCCCcceeEEeecCCHHHHHHHHH Confidence 5544444555555566766665433334443333322100 000 001111 122333433443344556777788 Q ss_pred HHHHHHHHHhccchHhhccccccccccHHHHHHHHHHHHHHHHH----HHHHHHHH-------hhhc-c--hhhccceee Q lcl|Aclame:pro 279 LNREEVCGVYDIAPPIVHILDRATFSNISAQMRAFYRDTMAIPI----ARIQSAMD-------KYVG-Q--YWVRKNRMK 344 (518) Q Consensus 279 ~~~~~Ia~~fgVpp~~lg~~~~~~~s~~e~~~~~~~~~~l~P~~----~~ie~~ln-------~~l~-~--~~~~~~~~~ 344 (518) ...+.|+..-++|....+.... +- +.++. .+....+.-.+ ..+...|. +.+- . .......++ T Consensus 328 ~l~~~i~~~s~~p~~~~~~~~~-n~-Sg~Al--~~~~~~l~~k~~~~~~~~~~~l~~~~~li~~~~~~~~~~~~~~~~i~ 403 (481) T protein:vir:10 328 RLQNDIHKYTNTPDLNDEQFSG-VQ-SGESM--KYKLFGLEQVRAIKERLFKKGLMKRYKLLLNNVNLTGLKQHNYAELT 403 (481) T ss_pred HHHHHHHHHhCCcccccccccc-cc-HHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCccccceee Confidence 8889999999999766653321 11 11111 11111111111 11111111 1110 0 011123455 Q ss_pred echhhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHHhCCCCCCccCceeeecccccccccccccCCCCCCCCCCCCcccC Q lcl|Aclame:pro 345 FDIDDVIQPDWEAKSESTQKMVNSGVATPNEGREIMGLPRSDDPKADELYANSALQPLGATPDGAVEGEEAPAPKRPAST 424 (518) Q Consensus 345 fd~~~l~~~d~~~~~~~~~~~~~~g~~T~NE~R~~~g~~pi~~~~gD~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~ 424 (518) +.+......|..+.++.+.++. |+++...+.+++++ ++++.. ++ .-+................++..+ T Consensus 404 v~f~~~~~~~~~~~a~~~~kl~--g~is~et~~~~l~~--i~d~~~-E~------~ri~~E~~~~~~~~~~~~~~~~~~- 471 (481) T protein:vir:10 404 ITFTPNLPKSMMESINAFNALS--GGVSESTRLSLLDF--IDNPKE-EL------EKMQEEEAQREKQADKRGYGEAFE- 471 (481) T ss_pred EEeCCCCCcCHHHHHHHHHHHh--ccCChHHHHHhCCC--CCCHHH-HH------HHHHHHHHHHHhhhhhccCCccCC- Confidence 6666777889999999998874 78888777777754 232211 10 000000000000000000000000 Q ss_pred CCCCccCCcccccc Q lcl|Aclame:pro 425 PVASLDQSPPASVP 438 (518) Q Consensus 425 ~~~~~~~~~~~~~~ 438 (518) ..+++..+.+ T Consensus 472 ----~~~~~dd~~g 481 (481) T protein:vir:10 472 ----NHLNVDDSNG 481 (481) T ss_pred ----CCCCCCCCCC Confidence 0000000000 No 187 >protein:vir:79043 Length: 479 # NCBI annotation: putative portal protein # Family: family:all:125 # MgeID: mge:1861 # MgeName: phiC2 # Cross-refs: genbank:acc:YP_001110721;genbank:gi:134287338;genbank:GeneID:4955217 Probab=98.35 E-value=1.2e-06 Score=53.13 Aligned_cols=379 Identities=9% Similarity=0.012 Sum_probs=171.6 Q ss_pred CCCCCCCCCccccccccchhhhhhhccCc----------cCCcccCccchhhHHHHhhhHHHHHHHHHHHHhhccCceEE Q lcl|Aclame:pro 1 MLLANGQTLSAPAMAELSPQMQDSYYYAP----------AVGMQLERQFSLYGGIYKNQPWVRTVIAKRAQALARLPVKC 70 (518) Q Consensus 1 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~v~~~v~~ia~~ia~lp~~v 70 (518) -...+.. .+ .-..+...+.+.- ..+........ ...-..++....+|+..+.-+.+-|..+ T Consensus 30 ~~~~~~~---~~----~~~~~~~yy~g~~~i~~~~~~~~~~~~~~~~~~~--~~~ki~~~~~~~Ivd~~~~~l~g~p~~~ 100 (479) T protein:vir:79 30 HYILKHR---PE----KYKQGEEYYYGNTDVNNKRRYYLLDGAKVDDFTK--VNNKAINNYHKLLVDQKVGYSVGNPIVF 100 (479) T ss_pred HHHhhhh---HH----HHHHHHHHhccCCccccccccccccccccccccc--CcceeecchHHHHHHHHHhhhhcCCcee Confidence 0000000 00 0000000010000 00000000000 0001124566677888888888888776 Q ss_pred EEecCCceeeecchHHHHHhhccCccCCHHHHHHHHHHHHHHcCCeeEEeeeCCCCceeeeeeeCCcceEEEeccCc-ce Q lcl|Aclame:pro 71 MFTSGDTETEEHDTGYAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQKNKSGTPEKLMPMHPSRVAIKRNSRT-GR 149 (518) Q Consensus 71 ~~~~~~~~~~~~~~~~~~l~~~PN~~~t~~~f~~~~~~~~ll~G~~~~~i~~~~~G~~~~l~~l~p~~v~~~~~~~~-~~ 149 (518) -..++ .....+..++. | ........++...+.+|.+|..+..+.+|++ .+..++|..+.++++... .. T Consensus 101 ~~~~~-----~~~~~~~~~~~--n---~~~~~~~~~~~~~~~~G~~~~~v~~d~~~~~-~i~~~~p~~~~~v~d~~~~~~ 169 (479) T protein:vir:79 101 NADDD-----NLTKLLNDLLG--E---EFDDTITELYLNASNKGVEWLHPYINRKGEF-KYVIIPAEEAIPIWDSKRQRE 169 (479) T ss_pred ccCCH-----HHHHHHHHHHh--c---CHHHHHHHHHHHHHhcCeEEEEEEeCCCCce-EEEEEccceeEEEEeCCCCCc Confidence 32111 01112222222 2 3455556677889999999999888888775 477788988888876432 11 Q ss_pred EEE---EeeccCCCCc---eeEEEeeee--------------------------------------------eEEeecCC Q lcl|Aclame:pro 150 YEY---YFQAGAGVGT---QLVSFADDE--------------------------------------------VVPIRFFN 179 (518) Q Consensus 150 ~~~---~~~~~~~~~~---~~~~~~~~~--------------------------------------------vih~~~~~ 179 (518) ..+ .|......+. ....+.... |++++.+ T Consensus 170 ~~~~ir~y~~~~~~~~~~~~~e~y~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vPvv~~~nn- 248 (479) T protein:vir:79 170 LVAFIRFYYIEDIDGNKIKRVEYYTENDITYFIERGNSFIQEFLYDEYGKMTDIQEGHFRINNKEQGWGKVPFIPFKNN- 248 (479) T ss_pred eEEEEEEEEEeecCCceEEEEEEEeCCcEEEEEecCCcccccccccccccccccccccccccccccCCCcccEEEecCC- Confidence 111 1111111110 001112222 3333321 Q ss_pred CCcccccchHHHHHHHHHHHHHHHHHHHHHHHHccCCcceeeeeCCcCCHHHHHHHHHHHHHHhcCccccccceeccCCc Q lcl|Aclame:pro 180 PDGLERGLSLMESLKSTIFSEDSSRNATAAMWKNAGRPNLVLRHEKRLSPEAQQRLREQFDRAHAGSSNTGKTMVVEEGM 259 (518) Q Consensus 180 ~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~p~gil~~~~~~~~e~~~~~~~~~~~~~~g~~n~g~~~vl~~g~ 259 (518) .+|.|-+..+...++....+.....+.++..+.|-.+++.-.....+. +... ...++++.++++. T Consensus 249 ----~~g~sd~~~v~~liDa~d~~~S~~~~~~~~~~~~~~v~~g~~~~~~~~---~~~~--------~~~~~~i~~~~~~ 313 (479) T protein:vir:79 249 ----EKCVSDLTFYKSLIDIYDNNISTLADNLDEIQEVIYVLKEYPGTSLQE---FIDN--------IRYYKSIKVDGGG 313 (479) T ss_pred ----CCCCcchhhhHHHHHHHHHHHHHHHHHHHHhhCceeeeecCCcccccc---chhh--------hhhccceecCCCC Confidence 247788888777777777666666777777777776654322111111 1111 1234556667666 Q ss_pred ccccccCChhhHHHHHHHHHHHHHHHHHhccchHhhccccccccccH----------HHHHHHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 260 EPIPLQLTAVEMQFIEARQLNREEVCGVYDIAPPIVHILDRATFSNI----------SAQMRAFYRDTMAIPIARIQSAM 329 (518) Q Consensus 260 ~~~~~~~~~~d~q~~e~~~~~~~~Ia~~fgVpp~~lg~~~~~~~s~~----------e~~~~~~~~~~l~P~~~~ie~~l 329 (518) +++.++.......+....+...+.|+..-++|..-.+..++.+.... .......+...+.-.++.+...+ T Consensus 314 ~~~~l~~~~~~~~~~~~~~~l~~~i~~~s~~p~~~~~~~gn~Sg~Ai~~~~~~l~~k~~~~~~~~~~~l~~~~~li~~~~ 393 (479) T protein:vir:79 314 GVDKLEINIPVEAKKELLDRLEKNIIIFGQGVNPESQNTGDKSGVALKFLYSLLDLKCSKTEKKFKKAIRELLWFVCEYL 393 (479) T ss_pred cceEEeccCCHHHHHHHHHHHHHHHHHHhCccccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Confidence 66555555555666677788888888888888654432221111000 01122233333333333333332 Q ss_pred HhhhcchhhccceeeechhhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHHhCCCCCCccCceeeecccccccccccccC Q lcl|Aclame:pro 330 DKYVGQYWVRKNRMKFDIDDVIQPDWEAKSESTQKMVNSGVATPNEGREIMGLPRSDDPKADELYANSALQPLGATPDGA 409 (518) Q Consensus 330 n~~l~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~T~NE~R~~~g~~pi~~~~gD~~~~~~n~~~~~~~~~~~ 409 (518) +..-.. ......+++.+..-+..|..+.++.+.++. |+++...+.++++. ++++... +....... T Consensus 394 ~~~~~~-~~~~~~i~i~f~~~~p~~~~~~a~~~~kl~--g~iS~et~l~~l~~--v~d~~~E----------~~ri~~E~ 458 (479) T protein:vir:79 394 KISGNK-SYDYKTVQITFNHSMIINEAEKIDMAAKST--GIVSDETIVSNHPW--VEDVNDE----------LERLKKQE 458 (479) T ss_pred hccCCC-ccccccceEEeCCCCCcCHHHHHHHHHHHh--ccCcHHHHHHhCCC--CCCHHHH----------HHHHHHHH Confidence 221111 112234556666777788899999988874 78988888877654 3322111 11000000 Q ss_pred CCCCCCCCCCCcccCCCCCccCCccccccccC Q lcl|Aclame:pro 410 VEGEEAPAPKRPASTPVASLDQSPPASVPGLS 441 (518) Q Consensus 410 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 441 (518) ... ....+.. .+..+... +++ T Consensus 459 ~~~--~~~~~~~-----~~~~~~~~----~e~ 479 (479) T protein:vir:79 459 DTQ--KEYDDLI-----PNNQDGVI----DET 479 (479) T ss_pred HHH--HHHHhcc-----CcccCCCc----CcC Confidence 000 0000000 00000000 000 No 188 >protein:vir:98883 Length: 517 # NCBI annotation: portal # Family: family:all:898 # MgeID: mge:1568 # MgeName: BCJA1c # Cross-refs: genbank:acc:YP_164413;genbank:gi:56694903;genbank:GeneID:3197273 Probab=98.33 E-value=1.3e-06 Score=52.94 Aligned_cols=404 Identities=9% Similarity=-0.007 Sum_probs=176.2 Q ss_pred CCCCCCCCCcc---cccc-------ccchhhhhhhccCccCCcccCcc---chhhHHHHhhhHHHHHHHHHHHHhhccCc Q lcl|Aclame:pro 1 MLLANGQTLSA---PAMA-------ELSPQMQDSYYYAPAVGMQLERQ---FSLYGGIYKNQPWVRTVIAKRAQALARLP 67 (518) Q Consensus 1 ~~f~~~~~~~~---~~~~-------~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~v~~~v~~ia~~ia~lp 67 (518) ++|+.+...+. +... -+.-| ...|.+.+ .++... ................+++.+|+-|..-+ T Consensus 16 ~~~~~~~~~~~~~~~~i~~~~~~~~~I~~w-~~~Y~g~~---~~~~~~~~~~~~~~~~~~sl~~~~~i~~~~A~Ll~~e~ 91 (517) T protein:vir:98 16 YALSGQTLKSINDHEKINIDPNELARIERN-LRQYEGDY---PQVEYINSQGKIQERDYMTLNLRKLSADVLSGLVFNEQ 91 (517) T ss_pred HHhcccchhHhhcCCceecCHHHHHHHHHH-HHHhcCCC---cccccccccccccccceeecCcHHHHHHHhhhhhcCCc Confidence 22332221111 0000 01111 11121111 111100 00000001111233345555555554434 Q ss_pred eEEEEecCCceee--ecchHHHHHhhccCccCCHHHHHHHHHHHHHHcCCeeEEeeeCCCCceeeeeeeCCcceEEEecc Q lcl|Aclame:pro 68 VKCMFTSGDTETE--EHDTGYAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQKNKSGTPEKLMPMHPSRVAIKRNS 145 (518) Q Consensus 68 ~~v~~~~~~~~~~--~~~~~~~~l~~~PN~~~t~~~f~~~~~~~~ll~G~~~~~i~~~~~G~~~~l~~l~p~~v~~~~~~ 145 (518) ..+.-.+.+.... ........++.+--.........+..+.+.+..|.+++.+..+.++ +.+..++++.+.+.... T Consensus 92 ~~i~v~d~~~~~~~~~~~~~~~e~l~~i~~~n~f~~~~~~~~e~a~a~G~~a~k~~~d~~~--~~I~~v~ad~~~Pl~~~ 169 (517) T protein:vir:98 92 CEVYVSDAKDEEKKDNSFKTAHEFIQHVFQHNKFIKNLSDYLEPTFALGGLTVRPYVDNGE--IEFSWALANAFYPLRSN 169 (517) T ss_pred ceEEecccccccccccchhHHHHHHHHHHHhccHHHHHHHHHHHHhhhCCEEEEEEEeCCe--eEEEEEcCCeeEEEEec Confidence 4443222221111 0011111122211112233444555677777889999888777433 33555666665542222 Q ss_pred Ccce-----------------EEEEeec------------------------cCCCCceeE-------------EEe--- Q lcl|Aclame:pro 146 RTGR-----------------YEYYFQA------------------------GAGVGTQLV-------------SFA--- 168 (518) Q Consensus 146 ~~~~-----------------~~~~~~~------------------------~~~~~~~~~-------------~~~--- 168 (518) .++. .+|.... .....|..+ .+. T Consensus 170 ~~~v~~~ai~~~~~~~~~~~~~~Yt~lE~H~~~~~~~~~~~y~I~n~ly~s~~~~~lG~~v~L~~~~e~l~~~~~~~g~~ 249 (517) T protein:vir:98 170 SNGISEGVMKSVTTKVIGNKTVYYTLLEFHEWEKTEEGESLYVITNELYKSDNEGEIGKRIPLEELYEGMQEKTYIQGLS 249 (517) T ss_pred CCCeEEEEEEEEEEEeecCCceEEEEEEEEecCceeccCCcEEEEEEEEecCCCccccccccccccccCCCcceeECCCC Confidence 1111 1111000 000001111 110 Q ss_pred eeeeEEeecCCCC----cccccchHHHHHHHHHHHHHHHHHHHHHHHHccCCcceeeeeCCcC-----CHHHHHHHHHHH Q lcl|Aclame:pro 169 DDEVVPIRFFNPD----GLERGLSLMESLKSTIFSEDSSRNATAAMWKNAGRPNLVLRHEKRL-----SPEAQQRLREQF 239 (518) Q Consensus 169 ~~~vih~~~~~~~----~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~p~gil~~~~~~-----~~e~~~~~~~~~ 239 (518) ..-+.||+.+-++ +..+|+|.+..+...+............-|+.|-+. .++ |..+ +.... .....| T Consensus 250 ~Plf~y~~~p~~N~~~~~splG~S~~~~a~~~~d~lD~~~s~~~~e~~~g~~~-i~v--p~~~l~~~~~~~g~-~~~~~~ 325 (517) T protein:vir:98 250 RPLFNYLKPSGFNNINPHSPLGLGITDNSVSTLKKINDTYDQFWWEIKMGQRT-VFV--SDVMLRTVPDESGM-PPPQVF 325 (517) T ss_pred cceEEEecCCcccccccCCCCCCchhhhhHHHHHHHHHHHHHHHHHHHhCCcc-eec--ChhhhccccCCCCc-ccCCCC Confidence 1113356654433 345799999999999998887777777778876553 222 2211 00000 000000 Q ss_pred HHHhcCccccccceec-cCCcccccccCChhhHHHHHHHHHHHHHHHHHhccchHhhccccccccccHHHHH--HHHHHH Q lcl|Aclame:pro 240 DRAHAGSSNTGKTMVV-EEGMEPIPLQLTAVEMQFIEARQLNREEVCGVYDIAPPIVHILDRATFSNISAQM--RAFYRD 316 (518) Q Consensus 240 ~~~~~g~~n~g~~~vl-~~g~~~~~~~~~~~d~q~~e~~~~~~~~Ia~~fgVpp~~lg~~~~~~~s~~e~~~--~~~~~~ 316 (518) + +........-. .++-.++.++..-.+-++.+..+...+.|+...|+++..+|..+.+. .+..+.. ..-.-. T Consensus 326 d----~~~~~y~~~~~~~~~~~i~~~~~~iR~e~~~~~~~~~L~~i~~~~Gls~~t~~~~~~~~-kTATEi~s~~~~~~~ 400 (517) T protein:vir:98 326 D----PDVNVYKSIRMGTDEEFVKDVTHDIRTEQYKEAINQALRTLEMELKLSVGTFSFDGRSM-KTATEIVSENDLTYR 400 (517) T ss_pred C----cccceeeeccCCCCCCceeeeccccchHHHHHHHHHHHHHHHHHhCCCccccccccccc-ccHHHHHHHHHHHHH Confidence 0 00000000001 12234566666777788999999999999999999999999865433 2332221 111112 Q ss_pred HHHHHHHHHHHHHHhh------------hcch-hhccceeeechhhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHH-hC Q lcl|Aclame:pro 317 TMAIPIARIQSAMDKY------------VGQY-WVRKNRMKFDIDDVIQPDWEAKSESTQKMVNSGVATPNEGREIM-GL 382 (518) Q Consensus 317 ~l~P~~~~ie~~ln~~------------l~~~-~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~T~NE~R~~~-g~ 382 (518) ++.-+...++..|... ++.. ....+.+.+++++-+..|.++.++...+++.+|+|++-+++.++ |+ T Consensus 401 t~~~~~~~~~~aL~~lv~~i~~l~~~~~~~~~~~~~~~~v~v~f~D~i~~D~~~~~~~~~~~v~aG~ms~~~~i~~~~g~ 480 (517) T protein:vir:98 401 TRNDHVYEVEQFIKGLVISVLELAKTYKLFGGEIPSAEHIGVDFDDGVFQDRSALLRFYGQAKTFGFIPTVEAIQRIFKV 480 (517) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCcceEEEcCCCCCCCHHHHHHHHHHHHhcCCCCHHHHHHHhCCC Confidence 3333333333333321 1111 11234567888888899999999999999999999999987665 64 Q ss_pred CCCCCccCceeeecccccccccccccCCCCCCCCCCCCcccCCCCCccC Q lcl|Aclame:pro 383 PRSDDPKADELYANSALQPLGATPDGAVEGEEAPAPKRPASTPVASLDQ 431 (518) Q Consensus 383 ~pi~~~~gD~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 431 (518) . ++..++.+.... . ......+. ...++...+..++++ T Consensus 481 ~---eeeA~~e~~~i~-----~---E~~~~~~~-~~~~~~~~~~~gd~e 517 (517) T protein:vir:98 481 P---KKTAEQWLEEIR-----K---DQIELDPV-TISQRAQKRMFGDEE 517 (517) T ss_pred C---hHHHHHHHHHHH-----H---hccccCCC-CccccccCCCCCCCC Confidence 3 333433221110 0 00000000 000000111111111 No 189 >protein:vir:1634 Length: 409 # NCBI annotation: Structural protein # Family: family:all:524 # MgeID: mge:33 # MgeName: r1t # Cross-refs: genbank:acc:NP_695055;genbank:gi:23455746;genbank:GeneID:955506 Probab=98.31 E-value=1.4e-06 Score=52.63 Aligned_cols=348 Identities=10% Similarity=0.065 Sum_probs=156.3 Q ss_pred CCCCCCCCCccccccccchhhhhhhccCcc---CCcccCccchhhHHHH-hhhHHHHHHHHHHHHhhccCceEEEEecCC Q lcl|Aclame:pro 1 MLLANGQTLSAPAMAELSPQMQDSYYYAPA---VGMQLERQFSLYGGIY-KNQPWVRTVIAKRAQALARLPVKCMFTSGD 76 (518) Q Consensus 1 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~-~~~~~v~~~v~~ia~~ia~lp~~v~~~~~~ 76 (518) ++.++=.. .-......-..+...+.+... .+..+.+ ..+..+ ....+..-+|+.+++.+.=-.|. . T Consensus 4 ~~i~~L~~-~~~~~~~r~~~~~~yY~g~~~~~~~~~~~p~---~~~~~~~~v~nw~~~iVds~a~rl~~~Gf~---~--- 73 (409) T protein:vir:16 4 KGIGYLRF-KLSVHKRRAEMRYEQYAMKHVDRFKGITIPQ---ALSQQYRSILGWCAKGVDSLADRLVFREFE---N--- 73 (409) T ss_pred HHHHHHHH-HHHHHhHHHHHHHHHHhccCchhhcchhhhH---HHHHHHhhhcChhHHHHHHhHhhccccccc---C--- Confidence 00000000 000000000001111111110 1111111 111111 12245566677766544333332 1 Q ss_pred ceeeecchHHHHHhhccCccCCHHHHHHHHHHHHHHcCCeeEEeeeCCCCceeeeeeeCCcceEEEeccCcceEEE--Ee Q lcl|Aclame:pro 77 TETEEHDTGYAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQKNKSGTPEKLMPMHPSRVAIKRNSRTGRYEY--YF 154 (518) Q Consensus 77 ~~~~~~~~~~~~l~~~PN~~~t~~~f~~~~~~~~ll~G~~~~~i~~~~~G~~~~l~~l~p~~v~~~~~~~~~~~~~--~~ 154 (518) .+..++.++.+ | +.......+..+.+++|.+|+.+..+.+|.+ .+.+++|.++...+|...+.+.. .+ T Consensus 74 -----~d~~l~~i~~~-N---~ld~~~~~~~~~al~yG~sf~~v~~~~dg~~-~i~~~sP~~~~~i~D~~~~~~~~a~~~ 143 (409) T protein:vir:16 74 -----DDFTVNEIFEE-N---NPDIFFDSTVLSALIASCSFTYISKGENDAV-RLQVIEATNATGIIDPITGLLTEGYAV 143 (409) T ss_pred -----cchHHHHHHHh-c---ChhHHHHHHHHHHHHhCceeEEEecCCCCce-EEEEEcccceEEEeecccccceeeeEE Confidence 12224444432 2 2234455778888999999999888888865 67788888888887764433222 11 Q ss_pred eccCCCCce------------------------eEEEeeeeeEEeecCCCCcccccchHH----HHHHHHHHHHHHHHHH Q lcl|Aclame:pro 155 QAGAGVGTQ------------------------LVSFADDEVVPIRFFNPDGLERGLSLM----ESLKSTIFSEDSSRNA 206 (518) Q Consensus 155 ~~~~~~~~~------------------------~~~~~~~~vih~~~~~~~~~~~G~s~~----~~~~~~i~~~~~~~~~ 206 (518) ...+..+.. ...+..-.|++|.+....+..+|.|.| ..+.+.+.....-... T Consensus 144 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~vPvV~f~n~~~~~~~~G~seI~~~v~~l~da~~r~~~~~~~ 223 (409) T protein:vir:16 144 LERDENNNVVLEAHFLPDRTDYYYRDSRNNISIANPTGNPLLVPIIHRPDAVRPFGRSRITRSGMYWQSNAKRTLERADV 223 (409) T ss_pred EEecCCCceEEEEEEecCcEEEEEecCccccceecCCCCcceEEecccccccccCCccccchhHHHHHHHHHHHHHHHHH Confidence 111111110 011111225566554333455787744 4444444444444444 Q ss_pred HHHHHHccCCcceee-eeCCcCCHHHHHHHHHHHHHHhcCccccccceecc-----CCcccccccCChhhHHHHHHHHHH Q lcl|Aclame:pro 207 TAAMWKNAGRPNLVL-RHEKRLSPEAQQRLREQFDRAHAGSSNTGKTMVVE-----EGMEPIPLQLTAVEMQFIEARQLN 280 (518) Q Consensus 207 ~~~~~~ng~~p~gil-~~~~~~~~e~~~~~~~~~~~~~~g~~n~g~~~vl~-----~g~~~~~~~~~~~d~q~~e~~~~~ 280 (518) ...|| +.|.-++ -.+.+. +..+ .|+.. .++++.++ .+.++.++....-+ .|++.++.. T Consensus 224 ~~e~~---a~pqr~i~G~d~d~--~~~~----~~~~~------~~~i~~~~~d~~g~~~~v~q~~~~~l~-~~~~~l~~~ 287 (409) T protein:vir:16 224 TAEFY---SFPQKYVTGLSDDA--EPME----TWKAT------VSSMLQFTKDEDGDKPTLGQFTQPSMS-PFTEQLRTA 287 (409) T ss_pred HHHHh---cChhheeEecCCCC--Cccc----hhhhh------hhHhhccCCCCCCCCceEEecCCCChh-HHHHHHHHH Confidence 44454 3444333 222221 1222 23221 12344443 22445444433222 388999999 Q ss_pred HHHHHHHhccchHhhccccccccccHHH---HHHHHHHHHHHHHHHHHHHHHHhh------hcchh----hccceeeech Q lcl|Aclame:pro 281 REEVCGVYDIAPPIVHILDRATFSNISA---QMRAFYRDTMAIPIARIQSAMDKY------VGQYW----VRKNRMKFDI 347 (518) Q Consensus 281 ~~~Ia~~fgVpp~~lg~~~~~~~s~~e~---~~~~~~~~~l~P~~~~ie~~ln~~------l~~~~----~~~~~~~fd~ 347 (518) +..+|.+=++|++.+|.... |-++.++ +...+...+ .--.+.+.+.+.+. +.... .....+++.+ T Consensus 288 ~~~~a~~s~lP~~~lg~~~~-NpsSa~Ai~a~~~~L~~ka-~~k~~~fg~~l~~~~rla~~~~~~~~~~~~~~~~~~v~W 365 (409) T protein:vir:16 288 AAGFAGETGLTLDDLGFVSD-NPSSVEAIKASHENLRLAG-RKAQRSLGAGLLNVAYLAACLRDDVPYLREQFSKTKPKW 365 (409) T ss_pred HHHHhhhcCCCHHHcccccC-chhHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhcCCCccchhhccceEEe Confidence 99999999999999997542 2122221 111111111 11111122222111 10100 0112334444 Q ss_pred hhhh---ccCHHHHHHHHHHHHhCCC--cCHHHHHHHHhCCCCC Q lcl|Aclame:pro 348 DDVI---QPDWEAKSESTQKMVNSGV--ATPNEGREIMGLPRSD 386 (518) Q Consensus 348 ~~l~---~~d~~~~~~~~~~~~~~g~--~T~NE~R~~~g~~pi~ 386 (518) .+.. ..+..+.++.+.+++.+|. ...+-+++++|+..-+ T Consensus 366 ~~~~~~~~~s~a~~aDa~~Kl~~a~~~~~~~~v~~~~~g~~~~d 409 (409) T protein:vir:16 366 EPLFEADASMLSLIGDGAIKLNQAIPEFINKDTIRDLTGIKGAE 409 (409) T ss_pred cCCCCcchhhHHHHHHHHHHHHhhcccccchhHHHHhccCCCCC Confidence 4443 3335677888889998863 3346679999997654 No 190 >protein:vir:99781 Length: 511 # NCBI annotation: portal protein # Family: family:all:125 # MgeID: mge:1497 # MgeName: phiETA2 # Cross-refs: genbank:acc:YP_001004303;genbank:gi:122891757;genbank:GeneID:4712336 Probab=98.28 E-value=1.7e-06 Score=52.18 Aligned_cols=415 Identities=8% Similarity=0.020 Sum_probs=169.9 Q ss_pred CCCCCCCCCccccccccchhhhhhhccCccCCcccCccch-hhHHHHhhhHHHHHHHHHHHHhhccCceEEEEecCCcee Q lcl|Aclame:pro 1 MLLANGQTLSAPAMAELSPQMQDSYYYAPAVGMQLERQFS-LYGGIYKNQPWVRTVIAKRAQALARLPVKCMFTSGDTET 79 (518) Q Consensus 1 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~v~~~v~~ia~~ia~lp~~v~~~~~~~~~ 79 (518) +|-... ....+.. .-+...+.+.-..-........ .....-...+.....|+..+.-+.+-|..+-..++ T Consensus 48 ~i~~~~-~~~~~r~----~~l~~Yy~g~~~i~~~~~~~~~~~~~~~ki~~n~~k~Iv~~~~~yl~g~p~~~~~~d~---- 118 (511) T protein:vir:99 48 YIEHHM-DYQRPRL----KVLSDYYEGKTKNLVELTRRKEEYMADNRVAHDYASYISDFINGYFLGNPIQYQDDDK---- 118 (511) T ss_pred HHHHHH-HhhHHHH----HHHHHHhcccCccccccCcccccccCcceeecchHHHHHHHHHhhhcccCceeecCch---- Confidence 000000 0000000 0011111110000000000000 00000012345566777777777777877632111 Q ss_pred eecchHHHHHhhccCccCCHHHHHHHHHHHHHHcCCeeEEeeeCCCCceeeeeeeCCcceEEEeccCc-ceEEE--E-ee Q lcl|Aclame:pro 80 EEHDTGYAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQKNKSGTPEKLMPMHPSRVAIKRNSRT-GRYEY--Y-FQ 155 (518) Q Consensus 80 ~~~~~~~~~l~~~PN~~~t~~~f~~~~~~~~ll~G~~~~~i~~~~~G~~~~l~~l~p~~v~~~~~~~~-~~~~~--~-~~ 155 (518) .....+..++.+ -........+..+++.+|.+|.++..+.+|.+ .+..++|..+.++++... ....+ . |. T Consensus 119 -~~~~~l~~~~~~----n~~~~~~~~~~~~~~i~G~a~~~vy~ded~~~-~i~~~~p~~~~~vyd~~~~~~~~~~vr~~~ 192 (511) T protein:vir:99 119 -DVLEAIEAFNDL----NDVESHNRSLGLDLSIYGKAYELMIRNQDDET-RLYKSDAMSTFVIYDNTIERNSIAGVRYLR 192 (511) T ss_pred -HHHHHHHHHHhh----cCHhHHHHHHHHHHHhcCeeEEEEEeCCCCce-EEEEEccceeEEEEcCCCCCceEEEEEEEE Confidence 111223333332 23455666788899999999999988888864 577788999888876532 11111 1 11 Q ss_pred c--cCCCCce---e-EEEeeeeeEEeecCCC-------------------------CcccccchHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 156 A--GAGVGTQ---L-VSFADDEVVPIRFFNP-------------------------DGLERGLSLMESLKSTIFSEDSSR 204 (518) Q Consensus 156 ~--~~~~~~~---~-~~~~~~~vih~~~~~~-------------------------~~~~~G~s~~~~~~~~i~~~~~~~ 204 (518) . ....... . ..+.+..+.+++.... .+...|.|.+..+...++....+. T Consensus 193 ~~~~~~~~~~~~~~~~vyt~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~vPvv~~~nn~~g~sd~e~v~~liDa~d~~~ 272 (511) T protein:vir:99 193 TKPIDKTDEDEVFTVDLFTSHGVYRYLTSRTNGLKLTPRENGFESHSFERMPITEFSNNERRKGDYEKVITLIDLYDNAE 272 (511) T ss_pred eeecccCccceEEEEEEEeCCcEEEEEecCCccccccccccccccCCCCccceEEecCCCCCCCchhhhHHHHHHHHHHH Confidence 0 0000000 0 1122333333321100 001257788887777777666666 Q ss_pred HHHHHHHHccCCcceeeeeCCcCCHHHHHHHHHHHHHHhcCcc-ccccceeccCCcccccccCChhhHHHHHHHHHHHHH Q lcl|Aclame:pro 205 NATAAMWKNAGRPNLVLRHEKRLSPEAQQRLREQFDRAHAGSS-NTGKTMVVEEGMEPIPLQLTAVEMQFIEARQLNREE 283 (518) Q Consensus 205 ~~~~~~~~ng~~p~gil~~~~~~~~e~~~~~~~~~~~~~~g~~-n~g~~~vl~~g~~~~~~~~~~~d~q~~e~~~~~~~~ 283 (518) .-..+.+...+.|-.+++-....+.++....++.-.-...... -.+...-..+|.++..++.......+....+...+. T Consensus 273 S~~~~~~~~~~~~~lv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~e~~~~~L~~~ 352 (511) T protein:vir:99 273 SDTANYMSDLNDAMLLIKGNLNLDPVEVRKQKEANVLFLEPTVYADSEGRETEGSVDGGYIYKQYDVQGTEAYKDRLNSD 352 (511) T ss_pred HHHHHHHHHhhchhhhhccCcccCchhhcccccccceecccccccccccccCCCCcceeEEeecCCHHHHHHHHHHHHHH Confidence 5556666666666555544333333333222211000000000 000111223455555555444555666778888899 Q ss_pred HHHHhccchHhhccc-cccccccHHH----------HHHHHHHHHHHHHHHHHHHHHHhhhcchh-hccceeeechhhhh Q lcl|Aclame:pro 284 VCGVYDIAPPIVHIL-DRATFSNISA----------QMRAFYRDTMAIPIARIQSAMDKYVGQYW-VRKNRMKFDIDDVI 351 (518) Q Consensus 284 Ia~~fgVpp~~lg~~-~~~~~s~~e~----------~~~~~~~~~l~P~~~~ie~~ln~~l~~~~-~~~~~~~fd~~~l~ 351 (518) |+..-++|..-.+.. ++.+...... .....+..+|.-.++.|...+...--... .....+++.+..-+ T Consensus 353 I~~~s~~P~~~~~~~~gn~Sg~Alk~~~~~l~~ka~~k~~~~~~~l~~~~~li~~~~~~~~~~~~~~~~~~i~i~f~~~~ 432 (511) T protein:vir:99 353 IHMFTNTPNMKDDNFSGTQSGEAMKYKLFGLEQRTKTKEGLFTKGLRRRAKLLETILKNTRSIDVSKDFNTVRYVYNRNL 432 (511) T ss_pred HHHHhCCcccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccccceEEeCCCC Confidence 999999987544322 1111111110 11122222222222222222221110000 11123455566667 Q ss_pred ccCHHHHHHHHHHHHhCCCcCHHHHHHHHhCCCCCCccCceeeecccccccccccccCCCCCCCCCCCCcccCCCCCccC Q lcl|Aclame:pro 352 QPDWEAKSESTQKMVNSGVATPNEGREIMGLPRSDDPKADELYANSALQPLGATPDGAVEGEEAPAPKRPASTPVASLDQ 431 (518) Q Consensus 352 ~~d~~~~~~~~~~~~~~g~~T~NE~R~~~g~~pi~~~~gD~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 431 (518) ..|..+.++.+.++. |+++..-+.++++. ++++... + .-+.................++...... + T Consensus 433 p~n~~e~~~~~~kl~--GiiS~et~l~~l~~--v~D~~~E-~------~ri~~E~~~~~~~~~~~~~~~~~~~~~~---~ 498 (511) T protein:vir:99 433 PKSLIEELKAYIDSG--GKISQTTLMSLFSF--FQDPELE-V------KKIEEDEKESIKKAQKNMYQDPRNINDD---E 498 (511) T ss_pred CcCHHHHHHHHHHHh--ccCCHHHHHHhCCC--CCCHHHH-H------HHHHHHHHHHHHHHhhcccccCCCCCCC---C Confidence 788999999988884 78888878887743 3322111 0 0000000000000000000000000000 0 Q ss_pred CccccccccChhhhc Q lcl|Aclame:pro 432 SPPASVPGLSPTNSD 446 (518) Q Consensus 432 ~~~~~~~~~~~~~~~ 446 (518) . ++..+.+.++.+ T Consensus 499 ~--~~~~~~~~d~~e 511 (511) T protein:vir:99 499 Q--DDSTKDSIDKKE 511 (511) T ss_pred C--CCCCcCcccccC Confidence 0 000000000000 No 191 >protein:vir:96366 Length: 511 # NCBI annotation: ORF006 # Family: family:all:125 # MgeID: mge:1613 # MgeName: 53 # Cross-refs: genbank:acc:YP_239644;genbank:gi:66395376;genbank:GeneID:5132842 Probab=98.28 E-value=1.8e-06 Score=52.13 Aligned_cols=420 Identities=9% Similarity=0.022 Sum_probs=172.9 Q ss_pred CCCCCCCCCcc-ccccccchh---hhhhhccC-ccCCcccCccchhhHHHHhhhHHHHHHHHHHHHhhccCceEEEEecC Q lcl|Aclame:pro 1 MLLANGQTLSA-PAMAELSPQ---MQDSYYYA-PAVGMQLERQFSLYGGIYKNQPWVRTVIAKRAQALARLPVKCMFTSG 75 (518) Q Consensus 1 ~~f~~~~~~~~-~~~~~~~~~---~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~v~~~v~~ia~~ia~lp~~v~~~~~ 75 (518) ++-.+.-..-. .-.....+. +...+.+. .................-...+...-.|+..+.-+-+-|..+-..++ T Consensus 39 ~~~~~~i~~~i~~~~~~~~~r~~~l~~Yy~g~~~il~~~~~~~~~~~~~~ki~~n~~k~Iv~~~~~yl~g~p~~~~~~d~ 118 (511) T protein:vir:96 39 LQNVNEVSKYIEHHMDYQRPRLKVLSDYYEGKTKNLVELTRRKEEYMADNRVAHDYASYISDFINGYFLGNPIQYQDDDK 118 (511) T ss_pred hcCHHHHHHHHHHHHHhhhHHHHHHHHHhhccCccccccCcccccccCcceeecchHHHHHHHHhhhhcccCceeecCch Confidence 11100000000 000000011 11111111 00000000000000000012355666778888877777877632111 Q ss_pred CceeeecchHHHHHhhccCccCCHHHHHHHHHHHHHHcCCeeEEeeeCCCCceeeeeeeCCcceEEEeccCc-ce-EE-- Q lcl|Aclame:pro 76 DTETEEHDTGYAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQKNKSGTPEKLMPMHPSRVAIKRNSRT-GR-YE-- 151 (518) Q Consensus 76 ~~~~~~~~~~~~~l~~~PN~~~t~~~f~~~~~~~~ll~G~~~~~i~~~~~G~~~~l~~l~p~~v~~~~~~~~-~~-~~-- 151 (518) .....+..++.. -....+...+..+++.+|.+|.++..+.+|.+ .+..++|..+.++++... .. .. T Consensus 119 -----~~~~~l~~~~~~----n~~~~~~~~~~~~~~~~G~a~~~vy~d~dg~~-~i~~~~p~~~~~v~dd~~~~~~~~~v 188 (511) T protein:vir:96 119 -----DVLEAIEAFNDL----NDVESHNRSLGLDLSIYGKAYELMIRNQDDET-RLYKSDAMSTFIIYDNTVERNSIAGV 188 (511) T ss_pred -----HHHHHHHHHHhh----cChhHHHHHHHHHHHhcCeeEEEEEeCCCCce-EEEEEcccceEEEEcCCCCCceEEEE Confidence 111223333332 23445666778889999999999988888864 577788999988876532 11 11 Q ss_pred --EEeeccCCCCce---eE-EEeeeeeEEeecCCC-------------------------CcccccchHHHHHHHHHHHH Q lcl|Aclame:pro 152 --YYFQAGAGVGTQ---LV-SFADDEVVPIRFFNP-------------------------DGLERGLSLMESLKSTIFSE 200 (518) Q Consensus 152 --~~~~~~~~~~~~---~~-~~~~~~vih~~~~~~-------------------------~~~~~G~s~~~~~~~~i~~~ 200 (518) |........... .+ .+.+..+.++..... .+...|.|.+..+...++.. T Consensus 189 r~~~~~~~~~~~~~~~~~~~vyt~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~vPvv~~~n~~~g~gd~e~v~~liDa~ 268 (511) T protein:vir:96 189 RYLRTKPIDKTDEDEVFTVDLFTSHGVYRYLTNRTNGLKLTPRENSFESHSFERMPITEFSNNERRKGDYEKVITLIDLY 268 (511) T ss_pred EEEEeeeccccccceEEEEEEEeCCcEEEEEecCCCcccccccccccccCcCcccceEEecCCCCCCCchhhhHHHHHHH Confidence 111110100000 11 223333333321110 01135788888887777777 Q ss_pred HHHHHHHHHHHHccCCcceeeeeCCcCCHHHHHHHHHHHHHHhcCccc-cccceeccCCcccccccCChhhHHHHHHHHH Q lcl|Aclame:pro 201 DSSRNATAAMWKNAGRPNLVLRHEKRLSPEAQQRLREQFDRAHAGSSN-TGKTMVVEEGMEPIPLQLTAVEMQFIEARQL 279 (518) Q Consensus 201 ~~~~~~~~~~~~ng~~p~gil~~~~~~~~e~~~~~~~~~~~~~~g~~n-~g~~~vl~~g~~~~~~~~~~~d~q~~e~~~~ 279 (518) ..+..-..+.+...+.|-.+++.....+.++.........-....... .....-..++.+...++.......+....+. T Consensus 269 ~~~~S~~~~~~~~~~~~~lv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~e~~~~~ 348 (511) T protein:vir:96 269 DNAESDTANYMSDLNDAMLLIKGNLNLDPVEVRKQKEANVLFLEPTVYVDAEGRETEGSVDGGYIYKQYDVQGTEAYKDR 348 (511) T ss_pred HHHHHHHHHHHHHhhcchhheecCccCCchhhcccccccceeccccceeccccccCCCCcceeEEeecCCHHHHHHHHHH Confidence 766655666666667776666554444444332222111000000000 0000011223333334433345556677788 Q ss_pred HHHHHHHHhccchHhhcccc-ccccccHH----------HHHHHHHHHHHHHHHHHHHHHHHhhhcch-hhccceeeech Q lcl|Aclame:pro 280 NREEVCGVYDIAPPIVHILD-RATFSNIS----------AQMRAFYRDTMAIPIARIQSAMDKYVGQY-WVRKNRMKFDI 347 (518) Q Consensus 280 ~~~~Ia~~fgVpp~~lg~~~-~~~~s~~e----------~~~~~~~~~~l~P~~~~ie~~ln~~l~~~-~~~~~~~~fd~ 347 (518) ..+.|+..-++|..-.+... +.+..... ......+..+|.-.++.|...+...-... ......+++.+ T Consensus 349 L~~~I~~~s~~P~~~~~~~~~n~Sg~Al~~~~~~l~~ka~~~~~~f~~~l~~~~~li~~~~~~~~~~~~~~~~~~i~~~f 428 (511) T protein:vir:96 349 LNSDIHMFTNTPNMKDDNFSGTQSGEAMKYKLFGLEQRTKTKEGLFTKGLRRRAKLLETILKNTRSIDANKDFNTVRYVY 428 (511) T ss_pred HHHHHHHHhCCccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccccccccceEEe Confidence 88899999999875543322 11111010 11122233333333333332222111000 01112345666 Q ss_pred hhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHHhCCCCCCccCceeeecccccccccccccCCCCCCCCCCCCcccCCCC Q lcl|Aclame:pro 348 DDVIQPDWEAKSESTQKMVNSGVATPNEGREIMGLPRSDDPKADELYANSALQPLGATPDGAVEGEEAPAPKRPASTPVA 427 (518) Q Consensus 348 ~~l~~~d~~~~~~~~~~~~~~g~~T~NE~R~~~g~~pi~~~~gD~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 427 (518) ..-+..|..+.++.+.++. |+++..-+.+++++ ++++.. ++ ..+.................++. .. T Consensus 429 ~~~~p~n~~e~~d~~~kl~--G~iS~et~l~~l~~--v~d~~~-El------~ri~~E~~~~~~~~~~~~~~~~~---~~ 494 (511) T protein:vir:96 429 NRNLPKSLIEELKAYIDSG--GKISQTTLMSLFSF--FQDPEL-EV------KKIEEDEKESIKKAQKGIYKDPR---DI 494 (511) T ss_pred CCCCCcCHHHHHHHHHHHh--ccCChHHHHHhCCC--CCCHHH-HH------HHHHHHHHHHHHHHhhccccCCC---CC Confidence 6777889999999998885 78888777777643 332211 10 00110000000000000000000 00 Q ss_pred CccCCccccccccChhhhc Q lcl|Aclame:pro 428 SLDQSPPASVPGLSPTNSD 446 (518) Q Consensus 428 ~~~~~~~~~~~~~~~~~~~ 446 (518) ++++ +++..+..+.+.+ T Consensus 495 ~~~~--~~~~~~~~~~e~~ 511 (511) T protein:vir:96 495 NDDE--QDDDTKDTVDKKE 511 (511) T ss_pred CCCC--CCCCccCcccccC Confidence 0000 0011011111111 No 192 >protein:vir:78805 Length: 511 # NCBI annotation: portal protein # Family: family:all:125 # MgeID: mge:1858 # MgeName: 80alpha # Cross-refs: genbank:acc:YP_001285356;genbank:gi:148717884;genbank:GeneID:5246936 Probab=98.28 E-value=1.8e-06 Score=52.13 Aligned_cols=420 Identities=9% Similarity=0.022 Sum_probs=172.9 Q ss_pred CCCCCCCCCcc-ccccccchh---hhhhhccC-ccCCcccCccchhhHHHHhhhHHHHHHHHHHHHhhccCceEEEEecC Q lcl|Aclame:pro 1 MLLANGQTLSA-PAMAELSPQ---MQDSYYYA-PAVGMQLERQFSLYGGIYKNQPWVRTVIAKRAQALARLPVKCMFTSG 75 (518) Q Consensus 1 ~~f~~~~~~~~-~~~~~~~~~---~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~v~~~v~~ia~~ia~lp~~v~~~~~ 75 (518) ++-.+.-..-. .-.....+. +...+.+. .................-...+...-.|+..+.-+-+-|..+-..++ T Consensus 39 ~~~~~~i~~~i~~~~~~~~~r~~~l~~Yy~g~~~il~~~~~~~~~~~~~~ki~~n~~k~Iv~~~~~yl~g~p~~~~~~d~ 118 (511) T protein:vir:78 39 LQNVNEVSKYIEHHMDYQRPRLKVLSDYYEGKTKNLVELTRRKEEYMADNRVAHDYASYISDFINGYFLGNPIQYQDDDK 118 (511) T ss_pred hcCHHHHHHHHHHHHHhhhHHHHHHHHHhhccCccccccCcccccccCcceeecchHHHHHHHHhhhhcccCceeecCch Confidence 11100000000 000000011 11111111 00000000000000000012355666778888877777877632111 Q ss_pred CceeeecchHHHHHhhccCccCCHHHHHHHHHHHHHHcCCeeEEeeeCCCCceeeeeeeCCcceEEEeccCc-ce-EE-- Q lcl|Aclame:pro 76 DTETEEHDTGYAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQKNKSGTPEKLMPMHPSRVAIKRNSRT-GR-YE-- 151 (518) Q Consensus 76 ~~~~~~~~~~~~~l~~~PN~~~t~~~f~~~~~~~~ll~G~~~~~i~~~~~G~~~~l~~l~p~~v~~~~~~~~-~~-~~-- 151 (518) .....+..++.. -....+...+..+++.+|.+|.++..+.+|.+ .+..++|..+.++++... .. .. T Consensus 119 -----~~~~~l~~~~~~----n~~~~~~~~~~~~~~~~G~a~~~vy~d~dg~~-~i~~~~p~~~~~v~dd~~~~~~~~~v 188 (511) T protein:vir:78 119 -----DVLEAIEAFNDL----NDVESHNRSLGLDLSIYGKAYELMIRNQDDET-RLYKSDAMSTFIIYDNTVERNSIAGV 188 (511) T ss_pred -----HHHHHHHHHHhh----cChhHHHHHHHHHHHhcCeeEEEEEeCCCCce-EEEEEcccceEEEEcCCCCCceEEEE Confidence 111223333332 23445666778889999999999988888864 577788999988876532 11 11 Q ss_pred --EEeeccCCCCce---eE-EEeeeeeEEeecCCC-------------------------CcccccchHHHHHHHHHHHH Q lcl|Aclame:pro 152 --YYFQAGAGVGTQ---LV-SFADDEVVPIRFFNP-------------------------DGLERGLSLMESLKSTIFSE 200 (518) Q Consensus 152 --~~~~~~~~~~~~---~~-~~~~~~vih~~~~~~-------------------------~~~~~G~s~~~~~~~~i~~~ 200 (518) |........... .+ .+.+..+.++..... .+...|.|.+..+...++.. T Consensus 189 r~~~~~~~~~~~~~~~~~~~vyt~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~vPvv~~~n~~~g~gd~e~v~~liDa~ 268 (511) T protein:vir:78 189 RYLRTKPIDKTDEDEVFTVDLFTSHGVYRYLTNRTNGLKLTPRENSFESHSFERMPITEFSNNERRKGDYEKVITLIDLY 268 (511) T ss_pred EEEEeeeccccccceEEEEEEEeCCcEEEEEecCCCcccccccccccccCcCcccceEEecCCCCCCCchhhhHHHHHHH Confidence 111110100000 11 223333333321110 01135788888887777777 Q ss_pred HHHHHHHHHHHHccCCcceeeeeCCcCCHHHHHHHHHHHHHHhcCccc-cccceeccCCcccccccCChhhHHHHHHHHH Q lcl|Aclame:pro 201 DSSRNATAAMWKNAGRPNLVLRHEKRLSPEAQQRLREQFDRAHAGSSN-TGKTMVVEEGMEPIPLQLTAVEMQFIEARQL 279 (518) Q Consensus 201 ~~~~~~~~~~~~ng~~p~gil~~~~~~~~e~~~~~~~~~~~~~~g~~n-~g~~~vl~~g~~~~~~~~~~~d~q~~e~~~~ 279 (518) ..+..-..+.+...+.|-.+++.....+.++.........-....... .....-..++.+...++.......+....+. T Consensus 269 ~~~~S~~~~~~~~~~~~~lv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~e~~~~~ 348 (511) T protein:vir:78 269 DNAESDTANYMSDLNDAMLLIKGNLNLDPVEVRKQKEANVLFLEPTVYVDAEGRETEGSVDGGYIYKQYDVQGTEAYKDR 348 (511) T ss_pred HHHHHHHHHHHHHhhcchhheecCccCCchhhcccccccceeccccceeccccccCCCCcceeEEeecCCHHHHHHHHHH Confidence 766655666666667776666554444444332222111000000000 0000011223333334433345556677788 Q ss_pred HHHHHHHHhccchHhhcccc-ccccccHH----------HHHHHHHHHHHHHHHHHHHHHHHhhhcch-hhccceeeech Q lcl|Aclame:pro 280 NREEVCGVYDIAPPIVHILD-RATFSNIS----------AQMRAFYRDTMAIPIARIQSAMDKYVGQY-WVRKNRMKFDI 347 (518) Q Consensus 280 ~~~~Ia~~fgVpp~~lg~~~-~~~~s~~e----------~~~~~~~~~~l~P~~~~ie~~ln~~l~~~-~~~~~~~~fd~ 347 (518) ..+.|+..-++|..-.+... +.+..... ......+..+|.-.++.|...+...-... ......+++.+ T Consensus 349 L~~~I~~~s~~P~~~~~~~~~n~Sg~Al~~~~~~l~~ka~~~~~~f~~~l~~~~~li~~~~~~~~~~~~~~~~~~i~~~f 428 (511) T protein:vir:78 349 LNSDIHMFTNTPNMKDDNFSGTQSGEAMKYKLFGLEQRTKTKEGLFTKGLRRRAKLLETILKNTRSIDANKDFNTVRYVY 428 (511) T ss_pred HHHHHHHHhCCccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccccccccceEEe Confidence 88899999999875543322 11111010 11122233333333333332222111000 01112345666 Q ss_pred hhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHHhCCCCCCccCceeeecccccccccccccCCCCCCCCCCCCcccCCCC Q lcl|Aclame:pro 348 DDVIQPDWEAKSESTQKMVNSGVATPNEGREIMGLPRSDDPKADELYANSALQPLGATPDGAVEGEEAPAPKRPASTPVA 427 (518) Q Consensus 348 ~~l~~~d~~~~~~~~~~~~~~g~~T~NE~R~~~g~~pi~~~~gD~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 427 (518) ..-+..|..+.++.+.++. |+++..-+.+++++ ++++.. ++ ..+.................++. .. T Consensus 429 ~~~~p~n~~e~~d~~~kl~--G~iS~et~l~~l~~--v~d~~~-El------~ri~~E~~~~~~~~~~~~~~~~~---~~ 494 (511) T protein:vir:78 429 NRNLPKSLIEELKAYIDSG--GKISQTTLMSLFSF--FQDPEL-EV------KKIEEDEKESIKKAQKGIYKDPR---DI 494 (511) T ss_pred CCCCCcCHHHHHHHHHHHh--ccCChHHHHHhCCC--CCCHHH-HH------HHHHHHHHHHHHHHhhccccCCC---CC Confidence 6777889999999998885 78888777777643 332211 10 00110000000000000000000 00 Q ss_pred CccCCccccccccChhhhc Q lcl|Aclame:pro 428 SLDQSPPASVPGLSPTNSD 446 (518) Q Consensus 428 ~~~~~~~~~~~~~~~~~~~ 446 (518) ++++ +++..+..+.+.+ T Consensus 495 ~~~~--~~~~~~~~~~e~~ 511 (511) T protein:vir:78 495 NDDE--QDDDTKDTVDKKE 511 (511) T ss_pred CCCC--CCCCccCcccccC Confidence 0000 0011011111111 No 193 >protein:vir:78907 Length: 518 # NCBI annotation: gp3 # Family: family:all:4147 # MgeID: mge:1859 # MgeName: A006 # Cross-refs: genbank:acc:YP_001468843;genbank:gi:157325445;genbank:GeneID:5601904 Probab=98.26 E-value=1.9e-06 Score=51.97 Aligned_cols=395 Identities=11% Similarity=0.048 Sum_probs=171.8 Q ss_pred CCCCCCC-CCccccccccchhhhh-----------hh--ccCccCCcccCccchhhHHHHhhhHHHHHHHHHHHHhhccC Q lcl|Aclame:pro 1 MLLANGQ-TLSAPAMAELSPQMQD-----------SY--YYAPAVGMQLERQFSLYGGIYKNQPWVRTVIAKRAQALARL 66 (518) Q Consensus 1 ~~f~~~~-~~~~~~~~~~~~~~~~-----------~~--~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~v~~ia~~ia~l 66 (518) +..-++. +.... .+.+.... .+ ...|..+.+ + .........+....+++.+|+-|..- T Consensus 12 ~~w~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~--~---~~~~~~~~~~l~~~i~~~~A~ll~~e 83 (518) T protein:vir:78 12 KGWLNGKPNGSEP---ELIPKYLPLVPDNQKEWSKDSYLTSLWAQGYV--P---TVHDKLMNSGTGNEIVVVAAEYISGK 83 (518) T ss_pred HHhhcCCCCccch---hccHHHhhhcccchhhhhhhhhhhhhcccCCC--C---ccccccccCChHHHHHHHHHHhhcCC Confidence 1111111 00000 00000000 00 001111100 0 00011112234456778888888766 Q ss_pred ceEEEEecCCc-eeeecchHHHHHhhccCccCCHHHHHHHHHHHHHHcCCeeEEeeeCCCCceeeeeeeCCcceEEEecc Q lcl|Aclame:pro 67 PVKCMFTSGDT-ETEEHDTGYAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQKNKSGTPEKLMPMHPSRVAIKRNS 145 (518) Q Consensus 67 p~~v~~~~~~~-~~~~~~~~~~~l~~~PN~~~t~~~f~~~~~~~~ll~G~~~~~i~~~~~G~~~~l~~l~p~~v~~~~~~ 145 (518) +..+.-...+. ..+.-...+..++.. -.+..-.+..+.+.+..|.+++.+..+ +|++ .+..++++.+.+.... T Consensus 84 ~~~i~v~~~~~~d~e~~~~~l~~il~~----n~f~~~~~~~~e~a~a~G~~~~k~~~d-~~~~-~i~~v~ad~~~P~~~~ 157 (518) T protein:vir:78 84 PLSIDVTGVNGSKDENLTKQLKEALRI----DNFDSKSVKIVELAGGSGVSAVKINIL-NGRP-SISVHSSSQFWIDFKN 157 (518) T ss_pred CceEEecCccccCcHHHHHHHHHHHHh----ccHHHHHHHHHHHhhccCceEEEEEEE-CCee-EEEEEcCCeeEEEeec Confidence 55543222111 111111122222221 223344445567777888888777665 4543 4666677666665422 Q ss_pred Cc--------------ceEEEE-------------------------eeccCCC---CceeEE----------------- Q lcl|Aclame:pro 146 RT--------------GRYEYY-------------------------FQAGAGV---GTQLVS----------------- 166 (518) Q Consensus 146 ~~--------------~~~~~~-------------------------~~~~~~~---~~~~~~----------------- 166 (518) .. ...+|. .+..... ...... T Consensus 158 g~~~~~~f~~~~~~~~k~~~y~~lE~he~~~~~~~~~~~~~~~I~n~ly~~~~~~~v~~~~~~~~~~l~~~~~~~~~~e~ 237 (518) T protein:vir:78 158 NEPFRFNFFEEIPTSNKADIYYLVESREIKQWDKEGKKLSGGFVTYSVIKIDGDKTTPISAERLPEQITSYLHTNDIQLN 237 (518) T ss_pred CcEEEEEEEEEeecCCcceeEEEEEeeccccccceeecccceeEEEEEeeecCcccccccccccccccccccccccCccc Confidence 10 011111 0000000 000000 Q ss_pred ------EeeeeeEEeecCCCC----cccccchHHHHHHHHHHHHHHHHHHHHHHHHccCCcceeeee-----C-CcCCHH Q lcl|Aclame:pro 167 ------FADDEVVPIRFFNPD----GLERGLSLMESLKSTIFSEDSSRNATAAMWKNAGRPNLVLRH-----E-KRLSPE 230 (518) Q Consensus 167 ------~~~~~vih~~~~~~~----~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~p~gil~~-----~-~~~~~e 230 (518) .+..-+.|++...++ +..+|+|.+..+...+............-|+. +.+..++.- . ...... T Consensus 238 ~~~~tg~~~~~~~~~~n~~~N~~~~~splG~S~~~~~~~~id~lD~~~s~~~~e~~~-g~~~i~v~~~~l~~~~~~~~~~ 316 (518) T protein:vir:78 238 HSVSIGLKSMGAYLINNSPSNTRYPHLNLGESDLSQCTNYLFAVDYFFTVYMREGEK-TKTKIAASERMFRKKVNKSTDK 316 (518) T ss_pred eeeccCCccceEEeeccccccccccCCCcCcchHhhhhHHHHHHHHHHHHHHHHHHh-CCceeeechhHhccCCCCCCCc Confidence 001112344433222 33469999999999999988888777888876 444444311 1 110100 Q ss_pred HHHHHHHHHHHHhcCccccccce--eccCCc----ccccccCChhhHHHHHHHHHHHHHHHHHhccchHhhccccccccc Q lcl|Aclame:pro 231 AQQRLREQFDRAHAGSSNTGKTM--VVEEGM----EPIPLQLTAVEMQFIEARQLNREEVCGVYDIAPPIVHILDRATFS 304 (518) Q Consensus 231 ~~~~~~~~~~~~~~g~~n~g~~~--vl~~g~----~~~~~~~~~~d~q~~e~~~~~~~~Ia~~fgVpp~~lg~~~~~~~s 304 (518) .. ..|. ...+....+ -.+.|. .++.++..-.+.++.+..+...+.|....|++|..+|..+. .-+ T Consensus 317 ~~----~~fd----~~~~~y~~i~~~~~~~~~~~~~i~~~~~~Ir~e~~~~~~~~~l~~~~~~~G~s~~tfg~~~~-~~T 387 (518) T protein:vir:78 317 EE----WSMN----VDEDYFMQFKGTLDAGAKLNDMIQFMQGDFRDGSYRETMEYFAQKAVSKSGYNPATFNLGNR-EVK 387 (518) T ss_pred cc----cccC----CCCceEEEecCcCCCCCccccceeeeecccChHHHHHHHHHHHHHHHHhhCCChhhcCcccc-ccc Confidence 00 0010 000110000 012222 25566666778889999999999999999999999986432 212 Q ss_pred cHHHH------------HHHHHHHHHHHHHHHHHHHHHhhhcc----hhhccceeeechhhhhccCHHHHHHHHHHHHhC Q lcl|Aclame:pro 305 NISAQ------------MRAFYRDTMAIPIARIQSAMDKYVGQ----YWVRKNRMKFDIDDVIQPDWEAKSESTQKMVNS 368 (518) Q Consensus 305 ~~e~~------------~~~~~~~~l~P~~~~ie~~ln~~l~~----~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~ 368 (518) ..|-. ....++.+|.-++..|...+...... .....+.+.|++++.+..|.++.++...+++.+ T Consensus 388 ATei~s~~~~~~~t~~~~~~~~e~al~~l~~~i~~l~~~~~~~~~~~~~~~~~~v~i~f~D~i~~D~~~~~~~~~~~v~a 467 (518) T protein:vir:78 388 ATEIWSLQDATVRKIEKKKRLIQNVYEQMLWDFLYLLTGGTNNKEKAIMRDEIRVIIEFPDPMSVNLNELSSTLNNMNSA 467 (518) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCccccccCCCceeEEEEeCCCCCCCHHHHHHHHHHHHhc Confidence 22111 11222223332333232222211110 011234577888888999999999999999999 Q ss_pred CCcCHHHHHHHHhCCCCCCccCceeeecccccccccccccCCCCCCCCCCCCcccCCCCCccCCcccc Q lcl|Aclame:pro 369 GVATPNEGREIMGLPRSDDPKADELYANSALQPLGATPDGAVEGEEAPAPKRPASTPVASLDQSPPAS 436 (518) Q Consensus 369 g~~T~NE~R~~~g~~pi~~~~gD~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 436 (518) |+|++.++-+++... .+++..++.+.. +... +.... .+. | .+... -++..+ T Consensus 468 GimS~e~~i~~~~~~-~~deea~~e~~r-----i~~E--~~~~~--~~~---p--~~~~g--~~~~~g 518 (518) T protein:vir:78 468 LAMSVEEKVKLIHPK-WEDEEIQAEVKR-----IYLE--NAIGE--VPD---P--EAIGG--METKGG 518 (518) T ss_pred CCCCHHHHHHHhCCC-CCHHHHHHHHHH-----HHHH--hcccC--CCC---C--ccccC--CCCCCC Confidence 999999866665332 333333322111 0000 00000 000 0 00000 000000 No 194 >protein:vir:93747 Length: 472 # NCBI annotation: ORF006 # Family: family:all:125 # MgeID: mge:1475 # MgeName: 55 # Cross-refs: genbank:acc:YP_240454;genbank:gi:66396119;genbank:GeneID:5133516 Probab=98.25 E-value=2.1e-06 Score=51.75 Aligned_cols=391 Identities=9% Similarity=0.009 Sum_probs=172.3 Q ss_pred CCCCCC--CCCccc-------cccccchhhhhhhccCccCCcccCc------cch--hh-HHHHhhhHHHHHHHHHHHHh Q lcl|Aclame:pro 1 MLLANG--QTLSAP-------AMAELSPQMQDSYYYAPAVGMQLER------QFS--LY-GGIYKNQPWVRTVIAKRAQA 62 (518) Q Consensus 1 ~~f~~~--~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~------~~~--~~-~~~~~~~~~v~~~v~~ia~~ 62 (518) -.|--. ...... ......+.+.....+..+....+.+ ... .. ...-...+....+|+..+.. T Consensus 14 ~~~~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~YY~g~~~i~~~~~~~~~~~~~~~~~~~~ri~~n~~~~ivd~~~~~ 93 (472) T protein:vir:93 14 AIVRTNNKPETLEEMIVRYIKQHLEKLPEISIGQEYYEQRPDIVKEPKPVDATGAVDPLKPDDRMITNFHANLVDQKVSY 93 (472) T ss_pred ceeeecCchhhHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccchhhccccccccccccccccchHHHHHHHHhhh Confidence 000000 000000 0000001111111110000000000 000 00 00011246777888888888 Q ss_pred hccCceEEEEecCCceeeecchHHHHHhhccCccCCHHHHHHHHHHHHHHcCCeeEEeeeCCCCceeeeeeeCCcceEEE Q lcl|Aclame:pro 63 LARLPVKCMFTSGDTETEEHDTGYAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQKNKSGTPEKLMPMHPSRVAIK 142 (518) Q Consensus 63 ia~lp~~v~~~~~~~~~~~~~~~~~~l~~~PN~~~t~~~f~~~~~~~~ll~G~~~~~i~~~~~G~~~~l~~l~p~~v~~~ 142 (518) +-+-|+.+...++ .....+..++. | ........+..+.+.+|.+|..+..+.+|.+ .+..++|..+.+. T Consensus 94 l~g~~~~~~~~d~-----~~~~~l~~~~~--n---~~~~~~~~~~~~~~~~G~~~~~v~~d~d~~~-~i~~~~p~~~~~i 162 (472) T protein:vir:93 94 IVGKPIAFKHTDD-----EVVKRIDEVLG--N---RFDDKLHSVLTGASNKGIEWLHPYLDEEGEF-KLFRVPAEQGIPI 162 (472) T ss_pred hcccCeeeccCCh-----HHHHHHHHHHh--c---cHHHHHHHHHHHHhhcCeEEEEEEECCCCce-EEEEEcccceEEE Confidence 8777877632111 01122223332 2 2344555677889999999999988888875 4777899998888 Q ss_pred eccC-cceEEEEeeccCC-CCceeEEEeee-----------------------------------eeEEeecCCCCcccc Q lcl|Aclame:pro 143 RNSR-TGRYEYYFQAGAG-VGTQLVSFADD-----------------------------------EVVPIRFFNPDGLER 185 (518) Q Consensus 143 ~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~-----------------------------------~vih~~~~~~~~~~~ 185 (518) ++.. .+...+.+..... .......+... .|++|++ ..+ T Consensus 163 ~d~~~~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vPvv~~~n-----n~~ 237 (472) T protein:vir:93 163 WTDKEHEELEAFIRMYKLENETKVEYWDKVTVNYYVYENGSLIPDYSNNLENSKTHFSTGSWGKIPFIPFKN-----NDL 237 (472) T ss_pred EcCCCCCceEEEEEEEEeecceeEEEEecCeEEEEEEecCeeeecccccccccccccccCCCCCcceEEecC-----CCC Confidence 7642 2222111100000 00000011111 2333332 135 Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHccCCcceeeeeCCcCCHHHHHHHHHHHHHHhcCccccccceeccCCccccccc Q lcl|Aclame:pro 186 GLSLMESLKSTIFSEDSSRNATAAMWKNAGRPNLVLRHEKRLSPEAQQRLREQFDRAHAGSSNTGKTMVVEEGMEPIPLQ 265 (518) Q Consensus 186 G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~p~gil~~~~~~~~e~~~~~~~~~~~~~~g~~n~g~~~vl~~g~~~~~~~ 265 (518) |.|.+..+...++....+.....+.++..+.|-.+++.-.. +....+...+. ..+++.++++.+...++ T Consensus 238 g~s~~e~v~~liDa~~~~~s~~~~~~~~~~~~~~~~~g~~~---~~~~~~~~~~~--------~~~~~~~~~~~~~~~l~ 306 (472) T protein:vir:93 238 EISDIFMYKTLIDAYNRRLSDLSNTFKDSNELTYVLTNYDD---QELPEFKRLLR--------YYGAIKVSDNGGVDTIQ 306 (472) T ss_pred CCCchhhhHHHHHHHHHHHHHHHHHHHHhcCceeEeecCCc---ccchhhHHHHh--------hccccccCCCCcceeEe Confidence 88888888888877776666666777777788666653222 22222222211 22345556555555555 Q ss_pred CChhhHHHHHHHHHHHHHHHHHhccchHhhccccccccccHHHH-------------HHHHHHHHHHHHHHHHHHHHHhh Q lcl|Aclame:pro 266 LTAVEMQFIEARQLNREEVCGVYDIAPPIVHILDRATFSNISAQ-------------MRAFYRDTMAIPIARIQSAMDKY 332 (518) Q Consensus 266 ~~~~d~q~~e~~~~~~~~Ia~~fgVpp~~lg~~~~~~~s~~e~~-------------~~~~~~~~l~P~~~~ie~~ln~~ 332 (518) .......+....+...+.|+..-++|..-.+..++ + .+..+. ....+...++-.++.|...++ T Consensus 307 ~~~~~~~~~~~~~~l~~~i~~~s~~p~~~~~~~~~-n-~Sg~Al~~~~~~l~~ka~~~~~~~~~~l~~~~~li~~~~~-- 382 (472) T protein:vir:93 307 VEVPVENSKKYLDELYQKIMLFGQAVDFSSDKFGS-A-PSGVALEFLYTNLNLKADKLARKAKVAIQELLWFVFEHFD-- 382 (472) T ss_pred ecCCHHHHHHHHHHHHHHHHHHhCCCCCCcccccc-C-chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-- Confidence 55566777788888889999999998654432211 1 111111 111222222222222222111 Q ss_pred hcchhhccceeeechhhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHHhCCCCCCccCceeeecccccccccccccCCCC Q lcl|Aclame:pro 333 VGQYWVRKNRMKFDIDDVIQPDWEAKSESTQKMVNSGVATPNEGREIMGLPRSDDPKADELYANSALQPLGATPDGAVEG 412 (518) Q Consensus 333 l~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~T~NE~R~~~g~~pi~~~~gD~~~~~~n~~~~~~~~~~~~~~ 412 (518) .......+++.+..-+..|..+.++.+.++ .|+++..-+.+++++- +++.. ++ .-+....... . T Consensus 383 ---~~~~~~~i~v~f~~~~p~~~~~~~~~~~k~--~giis~et~l~~l~~~--~d~~~-E~------~ri~~E~~~~--~ 446 (472) T protein:vir:93 383 ---IKGEHKDVDISFNYNKVANTELQVQTAQQS--MGIVSHETVLENHPFV--EDLQA-EL------ERIEQEQMEY--N 446 (472) T ss_pred ---CCcccceeeEEeCCCCCCCHHHHHHHHHHH--hccCchHHHHHhCCCC--CCHHH-HH------HHHHHHHHHH--H Confidence 111223445555677778888889988887 4788887777777542 22110 00 0000000000 0 Q ss_pred CCCCCCCCcccCCCCCccCCccccccc Q lcl|Aclame:pro 413 EEAPAPKRPASTPVASLDQSPPASVPG 439 (518) Q Consensus 413 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 439 (518) +....... ...+...++++.+++..+ T Consensus 447 ~~~~~~~~-~~~d~~~~~~~~~~~~~e 472 (472) T protein:vir:93 447 KQLPNLDD-GGADGAQQQERSNNKESE 472 (472) T ss_pred HhccCcCc-ccCCCCCCCCCCCcccCC Confidence 00000000 001111111111111111 No 195 >protein:vir:9568 Length: 410 # NCBI annotation: gp34 # Family: family:all:524 # MgeID: mge:171 # MgeName: SM1 # Cross-refs: genbank:acc:NP_862873;genbank:gi:32469465;genbank:GeneID:1461310 Probab=98.24 E-value=2.1e-06 Score=51.68 Aligned_cols=352 Identities=11% Similarity=0.098 Sum_probs=161.8 Q ss_pred CCCCCCCccccccccchhhhhhhccCc-c--CCcccCccchhhHHHH-hhhHHHHHHHHHHHHhhccCceEEEEecCCce Q lcl|Aclame:pro 3 LANGQTLSAPAMAELSPQMQDSYYYAP-A--VGMQLERQFSLYGGIY-KNQPWVRTVIAKRAQALARLPVKCMFTSGDTE 78 (518) Q Consensus 3 f~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~-~~~~~v~~~v~~ia~~ia~lp~~v~~~~~~~~ 78 (518) +..-+ ..-......+.+.. . .+..+.. .++..+ +...+..-+|+.+++.+.=-.|. .. T Consensus 1 l~~~~--------~r~~~~~~yY~g~~~~~~~~~~~p~---~~~~~~~~v~nw~~~~Vds~a~rl~~~Gf~---~~---- 62 (410) T protein:vir:95 1 MNLYQ--------SRVNLRYKHYAMQHYEAPTGITIPA---HIRAKYQAVLGWAAKGVDSLADRLIFRAFA---ND---- 62 (410) T ss_pred CCcch--------hhHHHHHHHhcCCCCccccchhccH---HHHhHHHhhcchhHHHHHHhHhhhcccccc---CC---- Confidence 00000 00011111121111 0 1111111 111111 22356666777776644433332 11 Q ss_pred eeecchHHHHHhhccCccCCHHHHHHHHHHHHHHcCCeeEEeeeCCCCceeeeeeeCCcceEEEeccCcceEEEEeec-- Q lcl|Aclame:pro 79 TEEHDTGYAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQKNKSGTPEKLMPMHPSRVAIKRNSRTGRYEYYFQA-- 156 (518) Q Consensus 79 ~~~~~~~~~~l~~~PN~~~t~~~f~~~~~~~~ll~G~~~~~i~~~~~G~~~~l~~l~p~~v~~~~~~~~~~~~~~~~~-- 156 (518) +..++.++.. | +.......+..+.+++|.+|+.+..+.+|.+ .+.+++|.++...+|+..+.+.+.+.. T Consensus 63 ----d~~l~~i~~~-N---~ld~~~~~~~~~al~~G~sf~~v~~~~d~~~-~i~~~sP~~~~~i~Dp~~~~~~~al~~~~ 133 (410) T protein:vir:95 63 ----DFNVTEIFDR-N---NPDIFFDSAILSALIGSCSFVYISKGEDDEV-RLQVIESSNATGVIDPITGLLVEGYAVLA 133 (410) T ss_pred ----CchHHHHHhh-c---ChHHHHHHHHHHHHHhCceeEEEecCCCCce-EEEEEcccceEEEEeCCCCceEEEEEEEE Confidence 1123444332 2 2344555778889999999999988888875 578899999998888765544333221 Q ss_pred cCCCCc--eeEEEee---------------------eeeEEeecCCCCcccccchH----HHHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 157 GAGVGT--QLVSFAD---------------------DEVVPIRFFNPDGLERGLSL----MESLKSTIFSEDSSRNATAA 209 (518) Q Consensus 157 ~~~~~~--~~~~~~~---------------------~~vih~~~~~~~~~~~G~s~----~~~~~~~i~~~~~~~~~~~~ 209 (518) ....+. ....+.+ -.|++|.+....+..+|.|. +..+.+.+.....-...... T Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~vPvV~f~n~~~l~~~~G~s~I~~~v~~l~da~~r~~~~~~~~~e 213 (410) T protein:vir:95 134 RDDYNRPTLEAYFEPNATHFIPKDGEPYSVTNETGIPLLVPVIHRPDAVRPFGRSRITRAGMYYQKYAKRTLERADITAE 213 (410) T ss_pred ecCCCeEEEEEEEeCCcEEEEeeCCccccccCCCCCcceEEecccccCCccCCccccchhHHHHHHHHHHHHHHHHHHHH Confidence 111110 0111111 23556654433344578774 44444444444444444444 Q ss_pred HHHccCCcceeee-eCCcCCHHHHHHHHHHHHHHhcCccccccceeccC-----CcccccccCChhhH-HHHHHHHHHHH Q lcl|Aclame:pro 210 MWKNAGRPNLVLR-HEKRLSPEAQQRLREQFDRAHAGSSNTGKTMVVEE-----GMEPIPLQLTAVEM-QFIEARQLNRE 282 (518) Q Consensus 210 ~~~ng~~p~gil~-~~~~~~~e~~~~~~~~~~~~~~g~~n~g~~~vl~~-----g~~~~~~~~~~~d~-q~~e~~~~~~~ 282 (518) || +.|.-++. .+.+ .+..+ .|+.. .++++.++. +.++.++.. .++ .|++.++..+. T Consensus 214 ~~---a~pqr~i~G~d~d--~~~~~----~~~~~------~~~i~~~~~~~~~~~~~v~q~~~--~~l~~~~~~l~~l~~ 276 (410) T protein:vir:95 214 FY---SWPQKYILGLDPD--AEPME----KWKAT------VSSLLTISSSDKGVKPSVGQFTT--ASMSPFTEQLRTAAA 276 (410) T ss_pred Hh---cchhheeeccCCC--CCcCc----hhhhh------hhhheeccCCCCCCcceEEecCC--CChHHHHHHHHHHHH Confidence 44 44443332 2211 11122 23221 233555542 234444433 333 38899999999 Q ss_pred HHHHHhccchHhhccccccccccHHH---HHHHHHHHHHHHHHHHHHHHHHhh------hcchh----hccceeeechh- Q lcl|Aclame:pro 283 EVCGVYDIAPPIVHILDRATFSNISA---QMRAFYRDTMAIPIARIQSAMDKY------VGQYW----VRKNRMKFDID- 348 (518) Q Consensus 283 ~Ia~~fgVpp~~lg~~~~~~~s~~e~---~~~~~~~~~l~P~~~~ie~~ln~~------l~~~~----~~~~~~~fd~~- 348 (518) .||..=++|++.+|.... |-++.++ ....+... ..-..+.+.+.+.+. +.... .....+++.+. T Consensus 277 ~~a~~s~lP~~~lg~~~~-NpsSa~Al~a~~~~L~~k-a~~k~~~fg~~l~~~~rla~~i~~~~~~~~~~~~~~~v~W~p 354 (410) T protein:vir:95 277 GFAGEMGLTLDDLGFVSD-NPSSVEAIKASHENLRLA-GRKAQRSLGAGLLNVAYVAACLRDEFRYTRSQFVRTAVKWEP 354 (410) T ss_pred HHhhhcCCCHHHhccccC-chhHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhcCCCCcccccceeeEEeee Confidence 999999999999996443 2222222 11111111 111111122222221 11110 11122333343 Q ss_pred --hhhccCHHHHHHHHHHHHhC--CCcCHHHHHHHHhCCCCCCccCceeeecccccccccccccCCCCC Q lcl|Aclame:pro 349 --DVIQPDWEAKSESTQKMVNS--GVATPNEGREIMGLPRSDDPKADELYANSALQPLGATPDGAVEGE 413 (518) Q Consensus 349 --~l~~~d~~~~~~~~~~~~~~--g~~T~NE~R~~~g~~pi~~~~gD~~~~~~n~~~~~~~~~~~~~~~ 413 (518) +....+..+.++.+.+++.+ |+....=+++.+|+.+-+ +. .. +. ......++ T Consensus 355 ~~d~~~~s~a~~aDa~~Kl~~a~~g~~~~~~~~~~lg~~~~~-----~~-~~--~~-----~e~~~~g~ 410 (410) T protein:vir:95 355 LFEADANTMTMIGDGVVKLNQALPGYINAETIRDLTGIAGDM-----SA-KP--VV-----SEGGSNGE 410 (410) T ss_pred cCCcchhhHHHHHHHHHHHHHhccCCccHHHHHHhcCCChHH-----HH-HH--HH-----HHHHhCCC Confidence 23334567778888888887 677777799999996432 10 00 00 00111111 No 196 >protein:vir:94805 Length: 492 # NCBI annotation: ORF006 # Family: family:all:125 # MgeID: mge:1531 # MgeName: 29 # Cross-refs: genbank:acc:YP_240531;genbank:gi:66396197;genbank:GeneID:5133585 Probab=98.24 E-value=2.2e-06 Score=51.57 Aligned_cols=390 Identities=9% Similarity=0.013 Sum_probs=169.9 Q ss_pred CCCCCCCCCccccccccchhhhhhhccCccC---CcccCcc---chhhHHHHhhhHHHHHHHHHHHHhhccCceEEEEec Q lcl|Aclame:pro 1 MLLANGQTLSAPAMAELSPQMQDSYYYAPAV---GMQLERQ---FSLYGGIYKNQPWVRTVIAKRAQALARLPVKCMFTS 74 (518) Q Consensus 1 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~---~~~~~~~~~~~~~v~~~v~~ia~~ia~lp~~v~~~~ 74 (518) ++= +.....+.. .-+...+.+.-.. ....... .......-..++....+|+..+..+-+-|+.+...+ T Consensus 52 ~i~--~~~~~~~r~----~~l~~YY~g~~~I~~~~~~~~~~~~~~~~~~~~ri~~n~~k~Ivd~~~~yl~G~p~~~~~~d 125 (492) T protein:vir:94 52 YIK--QHLEKLPEI----SIGQEYYEQRPDIVKEPKPVDATGAVDPLKPDDRMITNFHANLVDQKVSYIVGKPIAFKHTD 125 (492) T ss_pred HHH--HHHHHHHHH----HHHHHHhccccccccccccccccccccccccccccccchHHHHHHHHHhhhcccCceeccCc Confidence 110 000000000 0000111110000 0000000 000000011246777788888888888887763221 Q ss_pred CCceeeecchHHHHHhhccCccCCHHHHHHHHHHHHHHcCCeeEEeeeCCCCceeeeeeeCCcceEEEeccC-cceEEEE Q lcl|Aclame:pro 75 GDTETEEHDTGYAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQKNKSGTPEKLMPMHPSRVAIKRNSR-TGRYEYY 153 (518) Q Consensus 75 ~~~~~~~~~~~~~~l~~~PN~~~t~~~f~~~~~~~~ll~G~~~~~i~~~~~G~~~~l~~l~p~~v~~~~~~~-~~~~~~~ 153 (518) + .....+..++. | ........+..+++.+|.+|..+..+.+|.+ .+..++|..+.+.++.. .+...+. T Consensus 126 ~-----~~~~~l~~~~~--n---~~~~~~~~~~~~a~~~G~a~~~v~~d~dg~~-~~~~~~p~~~~~v~d~~~~~~~~a~ 194 (492) T protein:vir:94 126 D-----EVVKRIDEVLG--N---RFDDKLHSVLTGASNKGIEWLHPYLDEEGEF-KLFRVPAEQGIPIWTDKEHEELEAF 194 (492) T ss_pred h-----HHHHHHHHHHh--c---cHHHHHHHHHHHHhhCCeEEEEEEecCCCce-EEEEEcccceEEEEcCCCCCceEEE Confidence 1 01112223332 3 2345556778899999999999988888875 57778999988887632 2222111 Q ss_pred eeccC-CCCceeEEEeeeeeEEeecC---------------------CC---------CcccccchHHHHHHHHHHHHHH Q lcl|Aclame:pro 154 FQAGA-GVGTQLVSFADDEVVPIRFF---------------------NP---------DGLERGLSLMESLKSTIFSEDS 202 (518) Q Consensus 154 ~~~~~-~~~~~~~~~~~~~vih~~~~---------------------~~---------~~~~~G~s~~~~~~~~i~~~~~ 202 (518) +.... ........+....|.++... ++ .+...|.|-+......++.... T Consensus 195 ir~~~~~~~~~~~~y~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~vPvv~~~nn~~~~sd~e~v~~liDa~d~ 274 (492) T protein:vir:94 195 IRMYKLENETKVEYWDKVTVNYYVYENGSLIPDYSNNLENSKTHFSTGSWGKIPFIPFKNNDLEISDIFMYKTLIDAYNR 274 (492) T ss_pred EEEEeeccceeEEEEecCeEEEEEEecCeeeeccccccccccccccccCCCccceEEecCCCCCCCchHHHHHHHHHHHH Confidence 11000 00111111112222222100 00 0112578888888888887777 Q ss_pred HHHHHHHHHHccCCcceeeeeCCcCCHHHHHHHHHHHHHHhcCccccccceeccCCcccccccCChhhHHHHHHHHHHHH Q lcl|Aclame:pro 203 SRNATAAMWKNAGRPNLVLRHEKRLSPEAQQRLREQFDRAHAGSSNTGKTMVVEEGMEPIPLQLTAVEMQFIEARQLNRE 282 (518) Q Consensus 203 ~~~~~~~~~~ng~~p~gil~~~~~~~~e~~~~~~~~~~~~~~g~~n~g~~~vl~~g~~~~~~~~~~~d~q~~e~~~~~~~ 282 (518) +..-..+.++..+.|-.+++.-.. +....+...+. ..+++.++++.+...+........+....+...+ T Consensus 275 ~~S~~~~~~~~~~~p~lv~~g~~~---~~~~~~~~~~~--------~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~ 343 (492) T protein:vir:94 275 RLSDLSNTFKDSNELTYVLKNYDD---QELPEFKRLLR--------YYGAIKVSDNGGVDTIQVEVPVENSKKYLDELYQ 343 (492) T ss_pred HHHHHHHHHHHhcCceeeeecCCc---ccchhhHHHHh--------hccceecCCCCcceeEeccCCHHHHHHHHHHHHH Confidence 766667777777778666543222 22222222111 2334555555555444444444556667777788 Q ss_pred HHHHHhccchHhhccccccccccHHHH-------------HHHHHHHHHHHHHHHHHHHHHhhhcchhhccceeeechhh Q lcl|Aclame:pro 283 EVCGVYDIAPPIVHILDRATFSNISAQ-------------MRAFYRDTMAIPIARIQSAMDKYVGQYWVRKNRMKFDIDD 349 (518) Q Consensus 283 ~Ia~~fgVpp~~lg~~~~~~~s~~e~~-------------~~~~~~~~l~P~~~~ie~~ln~~l~~~~~~~~~~~fd~~~ 349 (518) .|+..-++|..-.+..+ ++ .+.++. ....+...|+-.++.|...++ .......+++.+.. T Consensus 344 ~I~~~s~~p~~~~~~~~-~n-~Sg~Al~~~~~~l~~k~~~k~~~f~~~l~~~~~li~~~~~-----~~~~~~~i~v~f~~ 416 (492) T protein:vir:94 344 KIMLFGQAVDFSSDKFG-SA-PSGVALEFLYTNLNLKADKLARKAKVAIQELLWFVFEHFD-----IKGEHKDVDISFNY 416 (492) T ss_pred HHHHHhCCcCCCccccc-cC-chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-----CCcccceeeEEecC Confidence 88888888753332111 11 111111 111222222222222222111 11122345555667 Q ss_pred hhccCHHHHHHHHHHHHhCCCcCHHHHHHHHhCCCCCCccCceeeecccccccccccccCCCCCCCCCCCCcccCCCCCc Q lcl|Aclame:pro 350 VIQPDWEAKSESTQKMVNSGVATPNEGREIMGLPRSDDPKADELYANSALQPLGATPDGAVEGEEAPAPKRPASTPVASL 429 (518) Q Consensus 350 l~~~d~~~~~~~~~~~~~~g~~T~NE~R~~~g~~pi~~~~gD~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 429 (518) -+..|..+.++.+.++. |+++..-++++++.-.-+....+++ ....... .+..+..... ......+ T Consensus 417 ~~p~~~~e~~~~~~kl~--giiS~et~~~~l~~v~d~~~E~eri---------~~E~~~~--~~~~~~~~~~-~~~~~~~ 482 (492) T protein:vir:94 417 NKVANTELQVQTAQQSM--GIVSHETVLENHPFVEDLQAELERI---------EQEQMEY--NKQLPNLDDG-GADSAQQ 482 (492) T ss_pred CCCCCHHHHHHHHHHHh--ccCchHHHHHhCCCCCCHHHHHHHH---------HHHHHHH--Hhhccccccc-cCCCCcc Confidence 77889999999988885 7888888888876532111111111 0000000 0000000000 0000000 Q ss_pred cCCccccccc Q lcl|Aclame:pro 430 DQSPPASVPG 439 (518) Q Consensus 430 ~~~~~~~~~~ 439 (518) ++..++...+ T Consensus 483 ~~~~~~~e~e 492 (492) T protein:vir:94 483 QERSNNKESE 492 (492) T ss_pred ccCCccccCC Confidence 0010011000 No 197 >protein:vir:3964 Length: 453 # NCBI annotation: putative portal protein # Family: family:all:125 # MgeID: mge:83 # MgeName: ul36 # Cross-refs: genbank:acc:NP_663672;genbank:gi:21716109;genbank:GeneID:951201 Probab=98.22 E-value=2.4e-06 Score=51.40 Aligned_cols=396 Identities=9% Similarity=0.081 Sum_probs=175.0 Q ss_pred CCCCCCCCCccccccccc-------hh---hhhhhccC-ccCCcccCccchhhHHHHhhhHHHHHHHHHHHHhhccCceE Q lcl|Aclame:pro 1 MLLANGQTLSAPAMAELS-------PQ---MQDSYYYA-PAVGMQLERQFSLYGGIYKNQPWVRTVIAKRAQALARLPVK 69 (518) Q Consensus 1 ~~f~~~~~~~~~~~~~~~-------~~---~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~v~~~v~~ia~~ia~lp~~ 69 (518) |.|-+.......-....- +. +...+.+. .....+.......... ...++....|+..+..+-+-|+. T Consensus 9 ~~~p~d~~~~~~~l~~~i~~~~~~~~r~~~~~~yy~g~~~i~~~~~~~~~~~~~k--i~~n~~~~ivd~~~~~l~g~~~~ 86 (453) T protein:vir:39 9 MTFPKDEPITNEVVTKFMEKHRLEVARYEYLKNMYRGIMAIDAEPTKDLWKPDNR--LTVNFTKYIVDTFTGYFNGIPVK 86 (453) T ss_pred eEcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCchhcCCCccccCccce--eecchHHHHHHHHhhhhcccCce Confidence 555554443332111100 01 11111111 0000000000000011 12456777888888888777877 Q ss_pred EEEecCCceeeecchHHHHHhhccCccCCHHHHHHHHHHHHHHcCCeeEEeeeCCCCceeeeeeeCCcceEEEeccCcc- Q lcl|Aclame:pro 70 CMFTSGDTETEEHDTGYAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQKNKSGTPEKLMPMHPSRVAIKRNSRTG- 148 (518) Q Consensus 70 v~~~~~~~~~~~~~~~~~~l~~~PN~~~t~~~f~~~~~~~~ll~G~~~~~i~~~~~G~~~~l~~l~p~~v~~~~~~~~~- 148 (518) +-..++ .....+..++.. | ........+..+.+.+|.+|..+..+.+|.+ .+..++|..+.+.++.... T Consensus 87 ~~~~d~-----~~~~~l~~i~~~-N---~~~~~~~~~~~~~~~~G~~~~~v~~d~~g~~-~i~~~~p~~~~~v~d~~~~~ 156 (453) T protein:vir:39 87 KSHSDK-----ETLSKLQEFDNL-N---DMEDEESELAKMACIYGRAFELLYQNEETQT-NVIYNTPENMFMVYDDTIKQ 156 (453) T ss_pred eccCCh-----HHHHHHHHHHHh-c---ChhHHHHHHHHHHhhcCeEEEEEEecCCCce-EEEEEcccceEEEecCCCCC Confidence 632211 111223333333 2 3345666778889999999999988888865 4666788888887764332 Q ss_pred eEEEE--eeccCCCCceeEEEeee-------------------------eeEEeecCCCCcccccchHHHHHHHHHHHHH Q lcl|Aclame:pro 149 RYEYY--FQAGAGVGTQLVSFADD-------------------------EVVPIRFFNPDGLERGLSLMESLKSTIFSED 201 (518) Q Consensus 149 ~~~~~--~~~~~~~~~~~~~~~~~-------------------------~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~ 201 (518) ...+. +............+.+. .|++|+. ...|.|.+..+...++... T Consensus 157 ~~~~~ir~~~~~~~~~~~~~yt~~~i~~~~~~~~~~~~~~~~~~~~g~vPvv~~~n-----~~~g~sd~e~v~~liDa~~ 231 (453) T protein:vir:39 157 EPLFAVRYGYDDDYKLYGEVYTKETTYALNGTMGFYNMTEQAPNPFDDLPVVEFYF-----NEERMSIFESVISLVNAFN 231 (453) T ss_pred eEEEEEEEEEeCCeEEEEEEEeCCeEEEEEecCCceeeecccccCCCceeEEEecC-----CCCCCcchhhhHHHHHHHH Confidence 11111 11111000000011111 2333332 1357788887777776666 Q ss_pred HHHHHHHHHHHccCCcceeeeeCCcCCHHHHHHHHHHHHHHhcCccccccceeccCCcccccccCChhhHHHHHHHHHHH Q lcl|Aclame:pro 202 SSRNATAAMWKNAGRPNLVLRHEKRLSPEAQQRLREQFDRAHAGSSNTGKTMVVEEGMEPIPLQLTAVEMQFIEARQLNR 281 (518) Q Consensus 202 ~~~~~~~~~~~ng~~p~gil~~~~~~~~e~~~~~~~~~~~~~~g~~n~g~~~vl~~g~~~~~~~~~~~d~q~~e~~~~~~ 281 (518) .+..-..+.+...+.|-.+++- ..++++....++.. ...... .....+.+.++..++.......+.+..+... T Consensus 232 ~~~s~~~~~~~~~~~p~~~~~g-~~~~~~~~~~~~~~---~~~~~~---~~~~~~~~~~~~~lt~~~~~~~~~~~~~~l~ 304 (453) T protein:vir:39 232 KAISEKANDVDYFSDQYLTFLG-AAVEEEDLKNIRSN---RVINYY---GESSEAKNVDVKFLEKPDSDSQTENLLDRLT 304 (453) T ss_pred HHHHHHHHHHHHhhCceeeeec-CCCCchhhhhhhhc---ceeeec---CCCCCCCCCceeEEeecCCHHHHHHHHHHHH Confidence 6655556666666777666553 33444444333221 000000 0011122333333443344555666777888 Q ss_pred HHHHHHhccchHhhccccccccccHH----------HHHHHHHHHHHHHHHHHHHHHHHhhhcchhhccceeeechhhhh Q lcl|Aclame:pro 282 EEVCGVYDIAPPIVHILDRATFSNIS----------AQMRAFYRDTMAIPIARIQSAMDKYVGQYWVRKNRMKFDIDDVI 351 (518) Q Consensus 282 ~~Ia~~fgVpp~~lg~~~~~~~s~~e----------~~~~~~~~~~l~P~~~~ie~~ln~~l~~~~~~~~~~~fd~~~l~ 351 (518) +.|+..-++|..-.+..++.+..-.+ ......+..++...++.+...++..-... ....+++.+..-+ T Consensus 305 ~~I~~~s~~p~~~~~~~gn~Sg~Al~~~~~~l~~ka~~~~~~~~~~l~~~~~li~~~~~~~~~~~--~~~~i~v~f~~~~ 382 (453) T protein:vir:39 305 KLIFQTTMVANISDESFGSSSGVSLAYKLQAMSNLALSFQRKFQSSLNSRYKLYCELSTNVSNKE--AWKDIEYTFTRNE 382 (453) T ss_pred HHHHHHhCCcccccccccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcc--ccccceEEeCCCC Confidence 88888888875332221111111111 11123333344444443333222211111 1123445556777 Q ss_pred ccCHHHHHHHHHHHHhCCCcCHHHHHHHHhCCCCCCccCceeeecccccccccccccCCCCCCCCCCCCcccCCCCCccC Q lcl|Aclame:pro 352 QPDWEAKSESTQKMVNSGVATPNEGREIMGLPRSDDPKADELYANSALQPLGATPDGAVEGEEAPAPKRPASTPVASLDQ 431 (518) Q Consensus 352 ~~d~~~~~~~~~~~~~~g~~T~NE~R~~~g~~pi~~~~gD~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 431 (518) ..|..+.++.+.++ .|+++..-+.+.++. ++++.. ++ .-+........ .......+... ..+++ T Consensus 383 p~~~~~~a~~~~kl--~g~is~et~l~~l~~--v~D~~~-E~------~ri~~E~~~~~---~~~~~~~~~~~--~~~~~ 446 (453) T protein:vir:39 383 PKDIKEQAETANIL--MGITSQETALSVISV--IPDVQA-EM------EKIKKEEASTA---IFDKDKQPSEK--GTDTV 446 (453) T ss_pred CcCHHHHHHHHHHH--hccCChHHHHHhCCC--CCCHHH-HH------HHHHHHHHHHH---HHHHhccCCCC--CCCCC Confidence 88889999998887 578998888887754 232211 11 00000000000 00000000000 00000 Q ss_pred Ccccccc Q lcl|Aclame:pro 432 SPPASVP 438 (518) Q Consensus 432 ~~~~~~~ 438 (518) .+..+++ T Consensus 447 ~~~~~~e 453 (453) T protein:vir:39 447 VPETNEE 453 (453) T ss_pred CCCcCCC Confidence 0000000 No 198 >protein:vir:94546 Length: 506 # NCBI annotation: minor head protein # Family: family:all:125 # MgeID: mge:1510 # MgeName: phiJL-1 # Cross-refs: genbank:acc:YP_223886;genbank:gi:62327098;genbank:GeneID:5075562 Probab=98.21 E-value=2.6e-06 Score=51.22 Aligned_cols=407 Identities=9% Similarity=0.048 Sum_probs=161.7 Q ss_pred CCCC-------CCCCCccccccccchhhhhhhccCc-cCCcccCccchhh-HHHHhhhHHHHHHHHHHHHhhccCceEEE Q lcl|Aclame:pro 1 MLLA-------NGQTLSAPAMAELSPQMQDSYYYAP-AVGMQLERQFSLY-GGIYKNQPWVRTVIAKRAQALARLPVKCM 71 (518) Q Consensus 1 ~~f~-------~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~v~~~v~~ia~~ia~lp~~v~ 71 (518) +-+- +-.....+.. .-+...+.+.- ............. ...-...+.....|+..+.-+-+-|+.+. T Consensus 22 l~~~~i~~li~~~~~~~~~r~----~~l~~YY~g~~~~i~~~~~~~~~~~~~~~ki~~n~~~~Iv~~~~~~l~G~p~~~~ 97 (506) T protein:vir:94 22 LTPNKIMKFITHHFNYQRPRL----EMLDDYYQGYNLKILDKQSRRHEDGKADHRATHSFAKYIADFQTSYSVGNPINVK 97 (506) T ss_pred CCHHHHHHHHHHHHHHHHHHH----HHHHHHhcCCCccccccccccccccCCcceeecchHHHHHHHhhhhhcccCceee Confidence 0000 0000000000 00111111100 0000000000000 00112345667788888888777787764 Q ss_pred EecCCceeeecchHHHHHhhccCccCCHHHHHHHHHHHHHHcCCeeEEeeeCCCCceeeeeeeCCcceEEEeccCc-ceE Q lcl|Aclame:pro 72 FTSGDTETEEHDTGYAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQKNKSGTPEKLMPMHPSRVAIKRNSRT-GRY 150 (518) Q Consensus 72 ~~~~~~~~~~~~~~~~~l~~~PN~~~t~~~f~~~~~~~~ll~G~~~~~i~~~~~G~~~~l~~l~p~~v~~~~~~~~-~~~ 150 (518) ..++. ....+..++.. -........+..+++.+|.+|..+..+.+|.+ .+..++|..+.+++++.. ... T Consensus 98 ~~d~~-----~~~~l~~~~~~----N~~~~~~~~~~~~~~~~G~a~~~v~~ded~~~-~i~~~~p~~~~~v~dd~~~~~~ 167 (506) T protein:vir:94 98 LPDDG-----SNSGFDTFNKA----NDVDAENYDLFLDMSRYGRAYEYVYRGEDNEE-HLAKLDPLDTFVIYSTDVDPKP 167 (506) T ss_pred cCcch-----HHHHHHHHHhc----cCHhHHHHHHHHHHHhcCeEEEEEEecCCCee-EEEEEcccceEEEecCCCCCce Confidence 32211 11223333332 23444556678888999999999988888765 566788888888876432 111 Q ss_pred EEEe---eccCCCC--------------------------------ceeEEEeeeeeEEeecCCCCcccccchHHHHHHH Q lcl|Aclame:pro 151 EYYF---QAGAGVG--------------------------------TQLVSFADDEVVPIRFFNPDGLERGLSLMESLKS 195 (518) Q Consensus 151 ~~~~---~~~~~~~--------------------------------~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~ 195 (518) .+.+ ......+ +....+..-.|++++.. ..|.|.+..... T Consensus 168 ~~~v~~~~~~~~~~~~~~~~~~~~~~yt~~~~~~~~~~~~~~~~~~~~~~~~g~vPvv~~~n~-----~~~~sd~e~~~~ 242 (506) T protein:vir:94 168 IMAVRYHQIELVDDNQVSTINYVPETWTADTYTLYNPTPIMGKMQVDTTKPITTFPVVEFKNS-----NFRLGDFENVLP 242 (506) T ss_pred EEEEEEEeeeeccCCceeEEEEEEEEEeCceEEEeccccCccceeccccccCCccceEEecCC-----CCCCCchhhhHH Confidence 1110 0000000 00001111123334332 135565665555 Q ss_pred HHHHHHHHHHHHHHHHHccCCcceeeeeCCc---------------------CCHHHHHHHHHHHHH-HhcCccccccce Q lcl|Aclame:pro 196 TIFSEDSSRNATAAMWKNAGRPNLVLRHEKR---------------------LSPEAQQRLREQFDR-AHAGSSNTGKTM 253 (518) Q Consensus 196 ~i~~~~~~~~~~~~~~~ng~~p~gil~~~~~---------------------~~~e~~~~~~~~~~~-~~~g~~n~g~~~ 253 (518) .++....+..-..+.......|-.+++.... ...+....+...+.. ........+.+. T Consensus 243 liDa~d~~~S~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (506) T protein:vir:94 243 LIDLYDAAQSDTANYMTDLNEAMLIIQGDIDTLFEGSDMMNTIDPNDEDAMAKLAKDKLELIKEMKDANMLLLKSGMTVN 322 (506) T ss_pred HHHHHHHHHHHHHHHHHHhhhHHHHHhcCccccccchhccccccccccccccccccchhHHHhhhhhcCeeeeccccccc Confidence 5554444333333333333333322221100 001111111111111 111111111112 Q ss_pred eccCCcccccccCChhhHHHHHHHHHHHHHHHHHhccchHhhc-cccccccccHH----------HHHHHHHHHHHHHHH Q lcl|Aclame:pro 254 VVEEGMEPIPLQLTAVEMQFIEARQLNREEVCGVYDIAPPIVH-ILDRATFSNIS----------AQMRAFYRDTMAIPI 322 (518) Q Consensus 254 vl~~g~~~~~~~~~~~d~q~~e~~~~~~~~Ia~~fgVpp~~lg-~~~~~~~s~~e----------~~~~~~~~~~l~P~~ 322 (518) ....+.++.-++.+.....+....+...+.|...-++|..-.. ..++.+..... ......+...++..+ T Consensus 323 ~~~~~~d~~~l~~~~~~~~~~~~~~~l~~~I~~~s~~p~~~~~~~~~n~Sg~Aik~~~~~l~~k~~~k~~~~~~~l~~~~ 402 (506) T protein:vir:94 323 GTQTSVDAKYINKTYDVVGSEAYKKRVAGDIHKFSHTPDLTDENFASNSSGVAMQYKVLGTVELASTKRRMFERGLYARY 402 (506) T ss_pred CccccccceeeeecCCHHHHHHHHHHHHHHHHHHhCccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Confidence 2223344444555555666777888889999999999864322 11111111011 122333444444444 Q ss_pred HHHHHHHHhhhcchhhccceeeechhhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHHhCCCCCCccCceeeeccccccc Q lcl|Aclame:pro 323 ARIQSAMDKYVGQYWVRKNRMKFDIDDVIQPDWEAKSESTQKMVNSGVATPNEGREIMGLPRSDDPKADELYANSALQPL 402 (518) Q Consensus 323 ~~ie~~ln~~l~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~T~NE~R~~~g~~pi~~~~gD~~~~~~n~~~~ 402 (518) +.|...++..=.........+++.+..-+..|..+.++.+.++ .|+++...+++++++ +++|.-. + T Consensus 403 ~li~~~~~~~~~~~~~d~~~i~i~f~~~~p~d~~e~a~~~~kl--~g~iS~et~~~~lp~--v~d~~~E----------~ 468 (506) T protein:vir:94 403 QIISDIENSIHGDWTFDPQELTFTFRDNLPADNISQIKALVQA--GATLPQKYLYQQLPG--VTNPQDI----------V 468 (506) T ss_pred HHHHHHHHhcCCccccccccceEEeCCCCCcCHHHHHHHHHHH--hccCChHHHHHhCCC--CCCHHHH----------H Confidence 4444333221000011122345556677788999999998887 479999889888743 3322110 0 Q ss_pred ccccccCCCCCCCCCCCCcccCCCCCccCCccccccccChhhhcc Q lcl|Aclame:pro 403 GATPDGAVEGEEAPAPKRPASTPVASLDQSPPASVPGLSPTNSDR 447 (518) Q Consensus 403 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 447 (518) ............ ....... ..+.++.... .++..+.-+ T Consensus 469 ~ri~~E~~~~~~--~~~~~~~--~~~~~~~~~~---~~~~~~e~~ 506 (506) T protein:vir:94 469 DMMKEQSANGDY--SFDQNGV--ISNDGQTNTT---ATQTDEEVR 506 (506) T ss_pred HHHHHHHHHHhh--cchhhcC--CCcccCcccc---ccccccCCC Confidence 000000000000 0000000 0000000000 000000001 No 199 >protein:vir:97336 Length: 492 # NCBI annotation: ORF006 # Family: family:all:125 # MgeID: mge:1666 # MgeName: 52A # Cross-refs: genbank:acc:YP_240606;genbank:gi:66396273;genbank:GeneID:5133692 Probab=98.17 E-value=3.1e-06 Score=50.76 Aligned_cols=385 Identities=10% Similarity=0.029 Sum_probs=170.9 Q ss_pred CCCCCCCCCccccccccchhhhhhhccCccC-C--cccCccc---hhhHHHHhhhHHHHHHHHHHHHhhccCceEEEEec Q lcl|Aclame:pro 1 MLLANGQTLSAPAMAELSPQMQDSYYYAPAV-G--MQLERQF---SLYGGIYKNQPWVRTVIAKRAQALARLPVKCMFTS 74 (518) Q Consensus 1 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~---~~~~~~~~~~~~v~~~v~~ia~~ia~lp~~v~~~~ 74 (518) ++=... ...+. -.-+...+.+.... . ....... ......-..++....+|+..+..+-+-|+.+...+ T Consensus 52 ~i~~~~--~~~~r----~~~l~~YY~g~~~i~~~~~~~~~~~~~~~~~~~~ri~~n~~k~Ivd~~~~yl~g~p~~~~~~d 125 (492) T protein:vir:97 52 YIKQHL--EKLPE----ISIGQEYYEQRPDIVKEPKPVDATGAVDPLKPDDRMITNFHANLVDQKVSYIVGKPIAFKHTD 125 (492) T ss_pred HHHHHH--HHHHH----HHHHHHHhcccCccccccccccccccccccccccccccchHHHHHHHHhhhhcccCceeccCc Confidence 110000 00000 00000111110000 0 0000000 00000001246677788888888878887763221 Q ss_pred CCceeeecchHHHHHhhccCccCCHHHHHHHHHHHHHHcCCeeEEeeeCCCCceeeeeeeCCcceEEEeccC-cceEEEE Q lcl|Aclame:pro 75 GDTETEEHDTGYAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQKNKSGTPEKLMPMHPSRVAIKRNSR-TGRYEYY 153 (518) Q Consensus 75 ~~~~~~~~~~~~~~l~~~PN~~~t~~~f~~~~~~~~ll~G~~~~~i~~~~~G~~~~l~~l~p~~v~~~~~~~-~~~~~~~ 153 (518) + .....+..++. |. .......+..+++.+|.+|..+..+.+|.+ .+..++|..+.+.++.. .+...+. T Consensus 126 ~-----~~~~~l~~~~~--n~---~~~~~~~~~~~~~~~G~a~~~v~~d~dg~~-~~~~~~p~~~~~i~d~~~~~~~~~~ 194 (492) T protein:vir:97 126 D-----EVVKRIDEVLG--NR---FDDKLHSVLTGASNKGIEWLHPYLDEEGEF-KLFRVPAEQGIPIWTDKEHEELEAF 194 (492) T ss_pred h-----HHHHHHHHHHh--cc---HHHHHHHHHHHHhhcCeEEEEEEecCCCce-EEEEEcccceEEEEcCCCCCceEEE Confidence 1 11122223332 32 334445678889999999999988888875 57778999998887642 2222111 Q ss_pred eeccCC-CCceeEEEeeee-----------------------------------eEEeecCCCCcccccchHHHHHHHHH Q lcl|Aclame:pro 154 FQAGAG-VGTQLVSFADDE-----------------------------------VVPIRFFNPDGLERGLSLMESLKSTI 197 (518) Q Consensus 154 ~~~~~~-~~~~~~~~~~~~-----------------------------------vih~~~~~~~~~~~G~s~~~~~~~~i 197 (518) +..... .......+.+.. |++|+. ...|.|.+......+ T Consensus 195 vr~~~~~~~~~~~~y~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~vPvv~~~n-----n~~g~sd~e~v~~li 269 (492) T protein:vir:97 195 IRMYKLENETKVEYWDKVTVNYYVYENGSLIPDYSNNLENSKTHFSTGSWGKIPFIPFKN-----NDLEISDIFMYKTLI 269 (492) T ss_pred EEEEeeccceeEEEEecCeEEEEEEecCeeeecccccccccccccccCCCCCcceEEecC-----CCCCCCchHhHHHHH Confidence 111000 000111112222 222222 124788888888888 Q ss_pred HHHHHHHHHHHHHHHccCCcceeeeeCCcCCHHHHHHHHHHHHHHhcCccccccceeccCCcccccccCChhhHHHHHHH Q lcl|Aclame:pro 198 FSEDSSRNATAAMWKNAGRPNLVLRHEKRLSPEAQQRLREQFDRAHAGSSNTGKTMVVEEGMEPIPLQLTAVEMQFIEAR 277 (518) Q Consensus 198 ~~~~~~~~~~~~~~~ng~~p~gil~~~~~~~~e~~~~~~~~~~~~~~g~~n~g~~~vl~~g~~~~~~~~~~~d~q~~e~~ 277 (518) +....+..-..+.+...+.|-.+++.-.. +....+...+. ..+++.++++.+...+........+.... T Consensus 270 Da~d~~~S~~~~~~~~~~~~~l~~~g~~~---~~~~~~~~~~~--------~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 338 (492) T protein:vir:97 270 DAYNRRLSDLSNTFKDSNELTYVLKNYDD---QELPEFKRLLR--------YYGAIKVSDNGGVDTIQVEVPVENSKKYL 338 (492) T ss_pred HHHHHHHHHHHHHHHHhccceeeeecCCc---ccchhHHHHHh--------hccceecCCCCcceeEeccCCHHHHHHHH Confidence 77776666667777777777666543222 22222222111 12345556555555555444556677778 Q ss_pred HHHHHHHHHHhccchHhhccccccccccHHHH-------------HHHHHHHHHHHHHHHHHHHHHhhhcchhhccceee Q lcl|Aclame:pro 278 QLNREEVCGVYDIAPPIVHILDRATFSNISAQ-------------MRAFYRDTMAIPIARIQSAMDKYVGQYWVRKNRMK 344 (518) Q Consensus 278 ~~~~~~Ia~~fgVpp~~lg~~~~~~~s~~e~~-------------~~~~~~~~l~P~~~~ie~~ln~~l~~~~~~~~~~~ 344 (518) +...+.|+..-++|..-.+..++ + .+.++. ....+...+...++.|...++ .......++ T Consensus 339 ~~L~~~I~~~s~~p~~~~~~~~~-n-~Sg~Al~~~~~~l~~ka~~~~~~f~~~l~~~~~li~~~~~-----~~~~~~~i~ 411 (492) T protein:vir:97 339 DELYQKIMLFGQAVDFSSDKFGS-A-PSGVALEFLYTNLNLKADKLARKAKVAIQELLWFVFEHFD-----IKGEHKDVD 411 (492) T ss_pred HHHHHHHHHHhCCCCCCcccccc-C-cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-----CCcccceee Confidence 88888999998888644322111 1 111111 112222223333322222111 111223445 Q ss_pred echhhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHHhCCCCCCccCceeeecccccccccccccCCCCCCCCCCCCcccC Q lcl|Aclame:pro 345 FDIDDVIQPDWEAKSESTQKMVNSGVATPNEGREIMGLPRSDDPKADELYANSALQPLGATPDGAVEGEEAPAPKRPAST 424 (518) Q Consensus 345 fd~~~l~~~d~~~~~~~~~~~~~~g~~T~NE~R~~~g~~pi~~~~gD~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~ 424 (518) +.+..-+..|..+.++.+.++ .|+++..-+.+++++- +++.. ++ ..+..... ...+..+.... ... T Consensus 412 v~f~~~~p~~~~e~a~~~~kl--~G~iS~et~l~~l~~v--~d~~~-El------eri~~E~~--~~~~~~~~~~~-~~~ 477 (492) T protein:vir:97 412 ISFNYNKVANTELQVQTAQQS--MGIVSHETVLENHPFV--EDLQA-EL------ERIEQEQT--EYNKQLPNLDD-GGA 477 (492) T ss_pred EEecCCCCCCHHHHHHHHHHH--hccCchHHHHHhCCCC--CCHHH-HH------HHHHHHHH--HHHHhhhcccc-CCC Confidence 555667778888899998887 4788887787777642 22211 10 00000000 00000000000 000 Q ss_pred CCCCccCCccccccc Q lcl|Aclame:pro 425 PVASLDQSPPASVPG 439 (518) Q Consensus 425 ~~~~~~~~~~~~~~~ 439 (518) +...+++.+..+..+ T Consensus 478 ~~~~~~~~~~~~~~e 492 (492) T protein:vir:97 478 DSAQQQERSNNKESE 492 (492) T ss_pred CCCcccccccccccC Confidence 011111111111000 No 200 >protein:vir:1236 Length: 483 # NCBI annotation: similar to phage Spp1 gp6 (portal protein) # Family: family:all:125 # MgeID: mge:25 # MgeName: phi ETA # Cross-refs: genbank:acc:NP_510935;genbank:gi:17426269;genbank:GeneID:927380 Probab=98.17 E-value=3.2e-06 Score=50.68 Aligned_cols=393 Identities=9% Similarity=0.013 Sum_probs=173.1 Q ss_pred CCCCC--CCCCcccc-------ccccchhhhhhhccCccCCcccCc------cchhh---HHHHhhhHHHHHHHHHHHHh Q lcl|Aclame:pro 1 MLLAN--GQTLSAPA-------MAELSPQMQDSYYYAPAVGMQLER------QFSLY---GGIYKNQPWVRTVIAKRAQA 62 (518) Q Consensus 1 ~~f~~--~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~---~~~~~~~~~v~~~v~~ia~~ 62 (518) -+|-. .......- .....+.+.....+..+...-+.+ ..... ...-...+....+|+..+.. T Consensus 25 ~~~~~~~~~e~~~~~i~~~i~~~~~~~~r~~~l~~YY~g~~~i~~~~~~~~~~~~~~~~~~~~ki~~n~~k~Ivd~~~~~ 104 (483) T protein:vir:12 25 AIVRTNNKPETLEEMIVRYIKQHLEKLPEISIGQEYYEQRPDIVKEPKPVDATGAVDPLKPDDRMITNFHANLVDQKVSY 104 (483) T ss_pred cccccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccccccccccccccccccccccchHHHHHHHHhhh Confidence 11110 00000000 000001111111111000000000 00000 00011246777788888888 Q ss_pred hccCceEEEEecCCceeeecchHHHHHhhccCccCCHHHHHHHHHHHHHHcCCeeEEeeeCCCCceeeeeeeCCcceEEE Q lcl|Aclame:pro 63 LARLPVKCMFTSGDTETEEHDTGYAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQKNKSGTPEKLMPMHPSRVAIK 142 (518) Q Consensus 63 ia~lp~~v~~~~~~~~~~~~~~~~~~l~~~PN~~~t~~~f~~~~~~~~ll~G~~~~~i~~~~~G~~~~l~~l~p~~v~~~ 142 (518) +-+-|+.+...++. ....+..++. | ........+..+++.+|.+|..+..+.+|.+ .+..++|..+.+. T Consensus 105 l~G~p~~~~~~d~~-----~~~~l~~~~~--n---~~~~~~~~~~~~~~~~G~~y~~v~~d~d~~~-~i~~~~p~~~~~v 173 (483) T protein:vir:12 105 IVGKPIAFKHTDDE-----VVKRIDEVLG--N---RFDDKLHSVLTGASNKGIEWLHPYLDEEGEF-KLFRVPAEQGIPI 173 (483) T ss_pred hcccCceeccCChH-----HHHHHHHHHh--c---cHHHHHHHHHHHHhhCCeEEEEEEEcCCCce-EEEEEcccceEEE Confidence 87888776322111 1112223332 2 2334445567889999999999988888875 4778899999888 Q ss_pred eccC-cceEEEEeeccC-CCCceeEEEeeee-----------------------------------eEEeecCCCCcccc Q lcl|Aclame:pro 143 RNSR-TGRYEYYFQAGA-GVGTQLVSFADDE-----------------------------------VVPIRFFNPDGLER 185 (518) Q Consensus 143 ~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~~-----------------------------------vih~~~~~~~~~~~ 185 (518) ++.. .+.+.+.+.... ........+.+.. |++|+. ... T Consensus 174 ~d~~~~~~~~~~ir~~~~~~~~~~~~y~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~vPvv~~~n-----n~~ 248 (483) T protein:vir:12 174 WTDKEHEELEAFIRMYKLENETKVEYWDKVTVNYYVYENGSLIPDYSNNLENSKTHFSTGSWGKIPFIPFKN-----NDL 248 (483) T ss_pred EcCCCCCceEEEEEEEEeecceEEEEEecCeEEEEEEeCCeeeecccccccccccccccCCCCccceEEecC-----CCC Confidence 7632 222211111000 0011111111222 222221 135 Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHccCCcceeeeeCCcCCHHHHHHHHHHHHHHhcCccccccceeccCCccccccc Q lcl|Aclame:pro 186 GLSLMESLKSTIFSEDSSRNATAAMWKNAGRPNLVLRHEKRLSPEAQQRLREQFDRAHAGSSNTGKTMVVEEGMEPIPLQ 265 (518) Q Consensus 186 G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~p~gil~~~~~~~~e~~~~~~~~~~~~~~g~~n~g~~~vl~~g~~~~~~~ 265 (518) |.|-+......++....+..-..+.++..+.|..+++.-.. +....+...+. .++++.++++.+...+. T Consensus 249 g~sd~e~v~~liDa~d~~~S~~~~~~~~~~~~~lv~~g~~~---~~~~~~~~~~~--------~~~~~~~~~~~~~~~l~ 317 (483) T protein:vir:12 249 EISDIFMYKTLIDAYNRRLSDLSNTFKDSNELTYVLTNYDD---QELPEFKRLLR--------YYGAIKVSDNGGVDTIQ 317 (483) T ss_pred CCCchhhHHHHHHHHHHHHHHHHHHHHHhcCceeeeecCCc---ccchhHHHhhh--------hccccccCCCCcceEEe Confidence 78888887777777776666666667777777666543222 22222222211 12344455555555455 Q ss_pred CChhhHHHHHHHHHHHHHHHHHhccchHhhccc-cccccccHH----------HHHHHHHHHHHHHHHHHHHHHHHhhhc Q lcl|Aclame:pro 266 LTAVEMQFIEARQLNREEVCGVYDIAPPIVHIL-DRATFSNIS----------AQMRAFYRDTMAIPIARIQSAMDKYVG 334 (518) Q Consensus 266 ~~~~d~q~~e~~~~~~~~Ia~~fgVpp~~lg~~-~~~~~s~~e----------~~~~~~~~~~l~P~~~~ie~~ln~~l~ 334 (518) ....+..+....+...+.|+..-++|..-.+.. ++.+....+ ......+..+++-.++.|...++ T Consensus 318 ~~~~~~~~~~~~~~l~~~I~~~s~~p~~~~~~~~~n~Sg~Al~~~~~~l~~k~~~~~~~f~~~l~~~~~li~~~~~---- 393 (483) T protein:vir:12 318 VEVPVENSKKYLDELYQKIMLFGQAVDFSSDKFGSAPSGVALEFLYTNLNLKADKLARKAKVAIQELLWFVFEHFD---- 393 (483) T ss_pred ecCCHHHHHHHHHHHHHHHHHHhCCCCCCccccccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc---- Confidence 444556677777888888999888886443321 111110000 11122222333333333322221 Q ss_pred chhhccceeeechhhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHHhCCCCCCccCceeeecccccccccccccCCCCCC Q lcl|Aclame:pro 335 QYWVRKNRMKFDIDDVIQPDWEAKSESTQKMVNSGVATPNEGREIMGLPRSDDPKADELYANSALQPLGATPDGAVEGEE 414 (518) Q Consensus 335 ~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~T~NE~R~~~g~~pi~~~~gD~~~~~~n~~~~~~~~~~~~~~~~ 414 (518) .......+++.+..-+..|..+.++.+.++ .|+++..-+.+.++.- +++.. ++ ..+...... ..+. T Consensus 394 -~~~~~~~i~v~f~~~~p~~~~~~a~~~~kl--~GiiS~et~~~~~~~v--~d~~~-E~------~ri~~E~~~--~~~~ 459 (483) T protein:vir:12 394 -IKGEHKDVDISFNYNKVANTELQVQTAQQS--MGIVSHETVLENHPFV--EDLQA-EL------ERIEQEQME--YNKQ 459 (483) T ss_pred -CCCccceeeEEeCCCCCCCHHHHHHHHHHH--hccCchHHHHHhCCCC--CCHHH-HH------HHHHHHHHH--HHhh Confidence 112223455556677788999999999987 4789988888877652 22211 00 000000000 0000 Q ss_pred CCCCCCcccCCCCCccCCccccccc Q lcl|Aclame:pro 415 APAPKRPASTPVASLDQSPPASVPG 439 (518) Q Consensus 415 ~~~~~~~~~~~~~~~~~~~~~~~~~ 439 (518) .+.... ...+...++++.+++..+ T Consensus 460 ~~~~~~-~~~d~~~~~~~~~~~e~e 483 (483) T protein:vir:12 460 LPNLDD-GGADGAQQQERSNNKESE 483 (483) T ss_pred cccccc-cccCCcccCCCCCcccCC Confidence 000000 000011111111111111 No 201 >protein:vir:99522 Length: 470 # NCBI annotation: putative protein # Family: family:all:125 # MgeID: mge:1559 # MgeName: Lj928 # Cross-refs: genbank:acc:NP_958533;genbank:gi:41179315;genbank:GeneID:2717160 Probab=98.08 E-value=5.2e-06 Score=49.57 Aligned_cols=397 Identities=12% Similarity=0.094 Sum_probs=175.9 Q ss_pred CCCCCCCCCccccccc--------cchh---hhhhhccCccCCcccCccchhhHHHHhhhHHHHHHHHHHHHhhccCceE Q lcl|Aclame:pro 1 MLLANGQTLSAPAMAE--------LSPQ---MQDSYYYAPAVGMQLERQFSLYGGIYKNQPWVRTVIAKRAQALARLPVK 69 (518) Q Consensus 1 ~~f~~~~~~~~~~~~~--------~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~v~~ia~~ia~lp~~ 69 (518) .+|...+......... ..+. +...+.+-.. ..-......-...-..++....+|+..+.-+-+-|+. T Consensus 17 ~~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~l~~Yy~g~~~--i~~~~~~~~~~~~ki~~n~~~~Ivd~~~~~l~g~p~~ 94 (470) T protein:vir:99 17 FIFPKGEKLTSNELLGFIAYNETVLKPRYRENMKLYLGKHK--ILTAPEKETGADNRIVVNSAKYVVDVYNGYFCGIEPK 94 (470) T ss_pred EEeCCCCCcCHHHHHHHHHHHHHhhHHHHHHHHHHhccccc--cccCcccccCCcceeecchHHHHHHHHhhhhccCCee Confidence 1111111111110000 0011 1111111000 0000000000001112356677888888887777877 Q ss_pred EEEecCCceeeecchHHHHHhhccCccCCHHHHHHHHHHHHHHcCCeeEEeeeCCCCceeeeeeeCCcceEEEeccCcce Q lcl|Aclame:pro 70 CMFTSGDTETEEHDTGYAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQKNKSGTPEKLMPMHPSRVAIKRNSRTGR 149 (518) Q Consensus 70 v~~~~~~~~~~~~~~~~~~l~~~PN~~~t~~~f~~~~~~~~ll~G~~~~~i~~~~~G~~~~l~~l~p~~v~~~~~~~~~~ 149 (518) +.-.+++. ....+..++. ..........++.+.+.+|.+|..+..+.+|.+ .+..++|..+.+.++..... T Consensus 95 ~~~~~d~~----~~~~l~~~~~----~n~~~~~~~~~~~~~~~~G~~~~~v~~d~dg~~-~i~~~~p~~~~~i~d~~~~~ 165 (470) T protein:vir:99 95 LALLNDSS----KIDEIARWNR----QENFFDTINEISKQCDIFGRSIASIYQGEDARP-HLMYSSPNHAFIIYDDTVQR 165 (470) T ss_pred EeeCCchh----HHHHHHHHHH----hcCHhHHHHHHHHHHHhcCeeEEEEEeCCCCeE-EEEEEccceeEEEEcCCCCc Confidence 64322111 1112233332 235556677888899999999999888888875 57778999998888764321 Q ss_pred -EEE--EeeccCCCC-ce--eEEEeeeeeEEeecC-------------CC---------CcccccchHHHHHHHHHHHHH Q lcl|Aclame:pro 150 -YEY--YFQAGAGVG-TQ--LVSFADDEVVPIRFF-------------NP---------DGLERGLSLMESLKSTIFSED 201 (518) Q Consensus 150 -~~~--~~~~~~~~~-~~--~~~~~~~~vih~~~~-------------~~---------~~~~~G~s~~~~~~~~i~~~~ 201 (518) ..+ ++....... .. ...+..+.++++... ++ .+..+|.|-+..+...++... T Consensus 166 ~~~~~vr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~vPvv~~~n~~~g~sd~e~v~~liDa~~ 245 (470) T protein:vir:99 166 QPLAFVHYQIDNSNNWTDAYGVIQYADKFYKFKGYDIEEDTNAAGYAINPYGLVPAVEFFENEERQGIFDSIKTLINALD 245 (470) T ss_pred ceEEEEEEEEEecCCeeEEEEEEEecCeEEEEEecccccccccccccccCCCccceEeecCCCCCCcchHhHHHHHHHHH Confidence 111 111111100 00 011122222221100 00 012358888888888887777 Q ss_pred HHHHHHHHHHHccCCcceeeeeCCcCCHHHHHHHHHHHHHHhcCccccccceec-----cCCcccccccCChhhHHHHHH Q lcl|Aclame:pro 202 SSRNATAAMWKNAGRPNLVLRHEKRLSPEAQQRLREQFDRAHAGSSNTGKTMVV-----EEGMEPIPLQLTAVEMQFIEA 276 (518) Q Consensus 202 ~~~~~~~~~~~ng~~p~gil~~~~~~~~e~~~~~~~~~~~~~~g~~n~g~~~vl-----~~g~~~~~~~~~~~d~q~~e~ 276 (518) .+.....+.+...+.|-.++..-....++..+. ...+.. .+++.+ +.+.++..++.......+... T Consensus 246 ~~~s~~~~~~~~~~~~~~~i~g~~~~~~~~g~~-~~~~~~--------~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 316 (470) T protein:vir:99 246 KVISQKANQVEYFDNAYMYMIGFKLPEDDEGNP-KFDFKN--------NRVLYVSQLDPDTNPQIGFIAKPDADQMQENL 316 (470) T ss_pred HHHHHHHHHHHHhcCceeeeecCCcccccccch-hhhhhh--------cceeeecCCCCCCCCcceEEeecCChHHHHHH Confidence 776667777777777877665432222221111 111111 122222 234444445544455556667 Q ss_pred HHHHHHHHHHHhccchHhhccccccccccHHHH-------------HHHHHHHHHHHHHHHHHHHHHhhhcchhhcccee Q lcl|Aclame:pro 277 RQLNREEVCGVYDIAPPIVHILDRATFSNISAQ-------------MRAFYRDTMAIPIARIQSAMDKYVGQYWVRKNRM 343 (518) Q Consensus 277 ~~~~~~~Ia~~fgVpp~~lg~~~~~~~s~~e~~-------------~~~~~~~~l~P~~~~ie~~ln~~l~~~~~~~~~~ 343 (518) .+...+.|+..-++|....+... ++-| ..+. ....+..+|.-.++.+...+...-... .....+ T Consensus 317 ~~~l~~~i~~~s~~p~~~~~~~~-~n~S-g~Ai~~~~~~l~~k~~~~~~~~~~~l~~~~~li~~~~~~~~~~~-~~~~~i 393 (470) T protein:vir:99 317 IQHLTDFIFMMAMVPNIQDKNFA-GNSS-GVALQYKLFAMKNKADSKERKFDKSLMQLYRIVLATLFNNKQDQ-ELWSEL 393 (470) T ss_pred HHHHHHHHHHHhCCccccccccc-cCch-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcc-cccccc Confidence 78888999999999975443221 1111 1111 112233333333333332222211111 112345 Q ss_pred eechhhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHHhCCCCCCccCceeeecccccccccccccCCCCCCCCCCCCccc Q lcl|Aclame:pro 344 KFDIDDVIQPDWEAKSESTQKMVNSGVATPNEGREIMGLPRSDDPKADELYANSALQPLGATPDGAVEGEEAPAPKRPAS 423 (518) Q Consensus 344 ~fd~~~l~~~d~~~~~~~~~~~~~~g~~T~NE~R~~~g~~pi~~~~gD~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~ 423 (518) ++.+..-+..|..+.++.+.++. |+++..-+++.++.- + +... +..+........ +...+ . . T Consensus 394 ~v~f~~~~p~~~~e~a~~~~kl~--giis~et~l~~l~~v--d-~~~E-------~eri~~E~~~~~--~~~~~--~--~ 455 (470) T protein:vir:99 394 DFKFTRNLPEDMASAIDNAKNAE--GIVSKKTQLGMIPDI--E-PDAE-------MKQIAKEKADAI--KQTQQ--L--S 455 (470) T ss_pred eEEeCCCCCcCHHHHHHHHHHHh--ccCCHHHHHHhCCCC--C-HHHH-------HHHHHHHHHHHH--HHHHh--h--c Confidence 56666777888999999988885 789987787776542 1 1110 000000000000 00000 0 0 Q ss_pred CCCCCccCCccccccccC Q lcl|Aclame:pro 424 TPVASLDQSPPASVPGLS 441 (518) Q Consensus 424 ~~~~~~~~~~~~~~~~~~ 441 (518) .+....+.++..+ ++ T Consensus 456 ~~~d~~~~d~~~e---e~ 470 (470) T protein:vir:99 456 MPIDILKRDNNAE---EE 470 (470) T ss_pred CCCCcCCCCCCcc---CC Confidence 0000000000000 00 No 202 >protein:vir:3609 Length: 452 # NCBI annotation: ORF32 # Family: family:all:125 # MgeID: mge:74 # MgeName: TP901-1 # Cross-refs: genbank:acc:NP_112695;genbank:gi:13786563;genbank:GeneID:921063 Probab=98.04 E-value=6.4e-06 Score=49.07 Aligned_cols=390 Identities=10% Similarity=0.073 Sum_probs=168.7 Q ss_pred CCCCCCCCCccccccc-cc------hhhh---hhhccCc-cCCcccCccchhhHHHHhhhHHHHHHHHHHHHhhccCceE Q lcl|Aclame:pro 1 MLLANGQTLSAPAMAE-LS------PQMQ---DSYYYAP-AVGMQLERQFSLYGGIYKNQPWVRTVIAKRAQALARLPVK 69 (518) Q Consensus 1 ~~f~~~~~~~~~~~~~-~~------~~~~---~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~v~~~v~~ia~~ia~lp~~ 69 (518) +.|-+........... +. +... ..+.+.. ....... ... ....-...+.....|+..+..+-+-|+. T Consensus 9 ~~~~~~~~~~~~~i~~~i~~~~~~~~r~~~~~~Yy~g~~~i~~~~~~-~~~-~~~~ki~~n~~~~ivd~~~~~l~g~~~~ 86 (452) T protein:vir:36 9 MTFSKDEPITVEVVTKFMEKHKLEVARYEYLKNMYLGIMAIDDEPAK-DSW-KPDNRLAVNFTKYIVDTFTGYFNGIPVK 86 (452) T ss_pred EEcCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHhccccccccCccc-ccc-CccceeecchHHHHHHHHhhhhcccCce Confidence 2222222222110000 00 0000 1111100 0000000 000 0000112356667788888777777777 Q ss_pred EEEecCCceeeecchHHHHHhhccCccCCHHHHHHHHHHHHHHcCCeeEEeeeCCCCceeeeeeeCCcceEEEeccCc-c Q lcl|Aclame:pro 70 CMFTSGDTETEEHDTGYAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQKNKSGTPEKLMPMHPSRVAIKRNSRT-G 148 (518) Q Consensus 70 v~~~~~~~~~~~~~~~~~~l~~~PN~~~t~~~f~~~~~~~~ll~G~~~~~i~~~~~G~~~~l~~l~p~~v~~~~~~~~-~ 148 (518) +...++. ....+..++.. -........+..+.+.+|.+|..+..+.+|.+ .+..++|..+.++++... . T Consensus 87 ~~~~d~~-----~~~~l~~~~~~----n~~~~~~~~~~~~~~~~G~~~~~v~~d~~g~~-~i~~~~p~~~~~v~d~~~~~ 156 (452) T protein:vir:36 87 KSHSDKE-----ILTKLQEFDNL----NDMEDEESELAKMACIYGRAFEFLYQDEDTQT-NVVYNSPENMFMVYDDTVKQ 156 (452) T ss_pred eecCChh-----HHHHHHHHHhh----cChhHHHHHHHHHHHhcCeEEEEEEecCCCee-EEEEEcccceEEEEcCCCCC Confidence 6422111 11222333322 23445566778889999999999888888865 467788888888776532 1 Q ss_pred eEEEEeec-cCCCCceeE-EEeeee-------------------------eEEeecCCCCcccccchHHHHHHHHHHHHH Q lcl|Aclame:pro 149 RYEYYFQA-GAGVGTQLV-SFADDE-------------------------VVPIRFFNPDGLERGLSLMESLKSTIFSED 201 (518) Q Consensus 149 ~~~~~~~~-~~~~~~~~~-~~~~~~-------------------------vih~~~~~~~~~~~G~s~~~~~~~~i~~~~ 201 (518) ...+.+.. ........+ .+.+.. |++++.. ..|.|.+......++... T Consensus 157 ~~~~~i~~~~~~~~~~~~~vyt~~~i~~~~~~~~~~~~~~~~~~~~g~iPvv~~~n~-----~~g~sd~e~v~~liDa~d 231 (452) T protein:vir:36 157 EPLFAVRYGVDEDKKLQGEVYTLLETIKISGENDEISFGEGTYNPYPDLPVVEFYFN-----EERMSIFESVISLVNAFN 231 (452) T ss_pred ceEEEEEEEEecCceEEEEEEecCeEEEEEEcCCceEEecceeccCCcccEEEecCC-----CCCCcchHHHHHHHHHHH Confidence 11111100 001111111 111112 3333221 257777777777777666 Q ss_pred HHHHHHHHHHHccCCcceeeeeCCcCCHHHHHHHHHHHHHHhcCccccccceeccC-C----cccccccCChhhHHHHHH Q lcl|Aclame:pro 202 SSRNATAAMWKNAGRPNLVLRHEKRLSPEAQQRLREQFDRAHAGSSNTGKTMVVEE-G----MEPIPLQLTAVEMQFIEA 276 (518) Q Consensus 202 ~~~~~~~~~~~ng~~p~gil~~~~~~~~e~~~~~~~~~~~~~~g~~n~g~~~vl~~-g----~~~~~~~~~~~d~q~~e~ 276 (518) .+.....+.+...+.|-.+++ +...+++....++. ++++.++. | .++..+........+... T Consensus 232 ~~~s~~~~~~~~~~~p~~~~~-g~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 298 (452) T protein:vir:36 232 KAISEKANDVDYFSDQYLTFL-GAAVEEEDLKNIRS------------NRVINYYADGEGKNVDVKFLEKPDSDSQTENL 298 (452) T ss_pred HHHHHHHHHHHHhcCceeEee-cCCcCchhhhhhhh------------cceEEecCCCCccCCcceeEeecCCHHHHHHH Confidence 666666666667777766654 33334333322211 12222221 2 233333433445556677 Q ss_pred HHHHHHHHHHHhccchHhhccccccccccHH----------HHHHHHHHHHHHHHHHHHHHHHHhhhcchhhccceeeec Q lcl|Aclame:pro 277 RQLNREEVCGVYDIAPPIVHILDRATFSNIS----------AQMRAFYRDTMAIPIARIQSAMDKYVGQYWVRKNRMKFD 346 (518) Q Consensus 277 ~~~~~~~Ia~~fgVpp~~lg~~~~~~~s~~e----------~~~~~~~~~~l~P~~~~ie~~ln~~l~~~~~~~~~~~fd 346 (518) .+...+.|+..-++|..-.+..++.+..-.+ ......+..++...++.|...++..-.. .....+++. T Consensus 299 ~~~l~~~I~~~s~~p~~~~~~~gn~Sg~Al~~~~~~l~~k~~~~~~~~~~~l~~~~~li~~~~~~~~~~--~~~~~i~i~ 376 (452) T protein:vir:36 299 LDRLTKLIFQTTMVANISDESFGSSSGVSLAYKLQAMSNLALSFQRKFQSSLNSRYKLFCELSTNVSNK--DSWKDIEYT 376 (452) T ss_pred HHHHHHHHHHHhCccccCcccccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCc--cccccceEE Confidence 7888889999888985333222111111110 1112233333333333333222211111 111234455 Q ss_pred hhhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHHhCCCCCCccCceeeecccccccccccccCCCCCCCCCCCCcccCCC Q lcl|Aclame:pro 347 IDDVIQPDWEAKSESTQKMVNSGVATPNEGREIMGLPRSDDPKADELYANSALQPLGATPDGAVEGEEAPAPKRPASTPV 426 (518) Q Consensus 347 ~~~l~~~d~~~~~~~~~~~~~~g~~T~NE~R~~~g~~pi~~~~gD~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 426 (518) +..-+..|..+.++.+.++ .|+++..-+.+.++.- +++.. ++ .-+................+....... T Consensus 377 f~~~~p~d~~~~a~~~~k~--~g~iS~et~~~~~~~~--~d~~~-E~------~ri~~E~~~~~~~~~~~~~~~~~~~~~ 445 (452) T protein:vir:36 377 FTRNEPKDIKEQAETANIL--MGITSQETALSVISVI--PDVQA-EM------EKIKKEEASTAIFDKDKQPSEKGTDTV 445 (452) T ss_pred eCCCCCcCHHHHHHHHHHH--hccCChHHHHHhCCCC--CCHHH-HH------HHHHHHHHHHHHHHhhccCCCCccccc Confidence 5566788899999998887 5788887777777542 22211 10 000000000000000000000000000 Q ss_pred CCccCCccccccccC Q lcl|Aclame:pro 427 ASLDQSPPASVPGLS 441 (518) Q Consensus 427 ~~~~~~~~~~~~~~~ 441 (518) .+++++ + T Consensus 446 ~~~~~~--------e 452 (452) T protein:vir:36 446 VSETNE--------E 452 (452) T ss_pred CccccC--------C Confidence 000000 0 No 203 >protein:vir:95113 Length: 474 # NCBI annotation: ORF007 # Family: family:all:125 # MgeID: mge:1549 # MgeName: X2 # Cross-refs: genbank:acc:YP_240817;genbank:gi:66394677;genbank:GeneID:5133907 Probab=97.99 E-value=8.1e-06 Score=48.50 Aligned_cols=386 Identities=11% Similarity=0.013 Sum_probs=166.2 Q ss_pred CCCCCCCCCccccccccchhhhhhhccCccCCcccCc---c---chhhHHHHhhhHHHHHHHHHHHHhhccCceEEEEec Q lcl|Aclame:pro 1 MLLANGQTLSAPAMAELSPQMQDSYYYAPAVGMQLER---Q---FSLYGGIYKNQPWVRTVIAKRAQALARLPVKCMFTS 74 (518) Q Consensus 1 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~---~~~~~~~~~~~~~v~~~v~~ia~~ia~lp~~v~~~~ 74 (518) ++-.... ..+.. .-+...+.+--....+... . .......-..++....+|+..+.-+-+-|+.+-..+ T Consensus 35 ~i~~~~~--~~~~~----~~~~~Yy~g~~~i~~r~~~~~~~~~~~~~~~~~ki~~n~~~~Ivd~~~~~l~g~p~~~~~~d 108 (474) T protein:vir:95 35 LIDDHRK--QLDKI----TVGQRYYDKDNDIVKQMKKVDVYGNIDYDKPDWRITTNFHQNLVDQKVSYVASKPVTYSCED 108 (474) T ss_pred HHHHHHH--HHHHH----HHHHHHhcccCchhccccccccccccccccccceeccchHHHHHHHHHhhhccCCceeccCc Confidence 1100000 00000 0000000000000000000 0 000000011235666788888888888887763211 Q ss_pred CCceeeecchHHHHHhhccCccCCHHHHHHHHHHHHHHcCCeeEEeeeCCCCceeeeeeeCCcceEEEeccC-cceEEEE Q lcl|Aclame:pro 75 GDTETEEHDTGYAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQKNKSGTPEKLMPMHPSRVAIKRNSR-TGRYEYY 153 (518) Q Consensus 75 ~~~~~~~~~~~~~~l~~~PN~~~t~~~f~~~~~~~~ll~G~~~~~i~~~~~G~~~~l~~l~p~~v~~~~~~~-~~~~~~~ 153 (518) + .....+..++. | ........++...+.+|.+|..+..+.+|++ .+..++|..+.++++.. .+...+. T Consensus 109 ~-----~~~~~l~~~~~--n---~~~~~~~e~~~~~~~~G~~~~~v~~d~~~~~-~i~~~~p~~~~~v~d~~~~~~~~~~ 177 (474) T protein:vir:95 109 E-----SVLKIIHDVLD--T---RWDNKLIDILTATSNKGIDWLQVYINENGEM-KLFRVPAEQAIPIWVDKEREELKSF 177 (474) T ss_pred h-----HHHHHHHHHHh--c---cHHHHHHHHHHHHhhcCcEEEEEEecCCCce-EEEEEcccceEEEEcCCCCCceEEE Confidence 1 11122333332 2 2344556677889999999999888888865 47778888888877643 2211111 Q ss_pred eeccC-CCCceeEEEeeee-----------------------------------eEEeecCCCCcccccchHHHHHHHHH Q lcl|Aclame:pro 154 FQAGA-GVGTQLVSFADDE-----------------------------------VVPIRFFNPDGLERGLSLMESLKSTI 197 (518) Q Consensus 154 ~~~~~-~~~~~~~~~~~~~-----------------------------------vih~~~~~~~~~~~G~s~~~~~~~~i 197 (518) +.... ........+.... |++++. ...|.|-+..+...+ T Consensus 178 i~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iPvv~~~n-----n~~g~sd~e~v~~li 252 (474) T protein:vir:95 178 IRYYKFNNEEKVEFWTDTTVTYYVLENGGLIPDYYYGANHIQSHFSNGNWGRVPFIAFKN-----NPEEVSDIWMYKSLI 252 (474) T ss_pred EEEEEEcCeeEEEEEeCCeEEEEEEcCCccccccccCcccccccccccCCCccceEeecC-----CCCCCCcHHHHHHHH Confidence 10000 0001111112222 333332 135788888877777 Q ss_pred HHHHHHHHHHHHHHHccCCcceeeeeCCcCCHHHHHHHHHHHHHHhcCccccccceeccCCcccccccCChhhHHHHHHH Q lcl|Aclame:pro 198 FSEDSSRNATAAMWKNAGRPNLVLRHEKRLSPEAQQRLREQFDRAHAGSSNTGKTMVVEEGMEPIPLQLTAVEMQFIEAR 277 (518) Q Consensus 198 ~~~~~~~~~~~~~~~ng~~p~gil~~~~~~~~e~~~~~~~~~~~~~~g~~n~g~~~vl~~g~~~~~~~~~~~d~q~~e~~ 277 (518) +....+.....+.++..+.|-.++.--...+.+. +... ...++++.++++.+...++.......+.... T Consensus 253 Da~d~~~S~~~~~~~~~~~p~lv~~g~~~~~~~~-------~~~~----~~~~~~i~~~~~~~~~~l~~~~~~~~~~~~~ 321 (474) T protein:vir:95 253 DAIDKRLSDAQNMFDESVELIYILKGYEGQDLEE-------FMRG----LKYYKAINVDGDGGVETIQVEVPVSSTKEYI 321 (474) T ss_pred HHHHHHHHHHHHHHHHhcCceeeeecCCcccchh-------hhhh----hhccceeeccCCCceeEEeecCCHHHHHHHH Confidence 7777666666666777777766554322211111 1111 1234556667666666565555566677788 Q ss_pred HHHHHHHHHHhccchHhhc-cccccccccHH----------HHHHHHHHHHHHHHHHHHHHHHHhhhcchhhccceeeec Q lcl|Aclame:pro 278 QLNREEVCGVYDIAPPIVH-ILDRATFSNIS----------AQMRAFYRDTMAIPIARIQSAMDKYVGQYWVRKNRMKFD 346 (518) Q Consensus 278 ~~~~~~Ia~~fgVpp~~lg-~~~~~~~s~~e----------~~~~~~~~~~l~P~~~~ie~~ln~~l~~~~~~~~~~~fd 346 (518) +...+.|+..-++|..-.+ ..++.+....+ +.....+..+|+-.++.|...+. .......+++. T Consensus 322 ~~l~~~i~~~s~~p~~~~~~~~~n~Sg~Alk~~~~~l~~k~~~k~~~~~~~l~~~~~li~~~~g-----~~~d~~~i~v~ 396 (474) T protein:vir:95 322 DLMRAYIMEFGQGVDFQTDKFGSAPSGIALKFLYGNLDLKANKLKNKATVAIQELIGFIIDFNN-----LKMDVKDIEIS 396 (474) T ss_pred HHHHHHHHHHhCCcccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-----CCcccceeeEE Confidence 8888999999999863322 11111110010 11112223333333333322211 11122233444 Q ss_pred hhhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHHhCCCCCCccCceeeecccccccccccccCCCCCCCCCCCCcccCCC Q lcl|Aclame:pro 347 IDDVIQPDWEAKSESTQKMVNSGVATPNEGREIMGLPRSDDPKADELYANSALQPLGATPDGAVEGEEAPAPKRPASTPV 426 (518) Q Consensus 347 ~~~l~~~d~~~~~~~~~~~~~~g~~T~NE~R~~~g~~pi~~~~gD~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 426 (518) ++.-...|..+.++ .+++.|+++..-+...+++ ++++.. ++ .-+.... ....+....... ...+. T Consensus 397 f~~~~p~d~~e~a~---~~~~~g~iS~et~i~~l~~--v~d~~~-E~------~ri~~E~--~~~~~~~~~~~~-~~~d~ 461 (474) T protein:vir:95 397 FNFNRMMNDAEQSQ---IIAQSQYLSRETLVKSSPL--VDDYKA-EL------ERIEQEQ--MEYNKQLPNLDD-GGADG 461 (474) T ss_pred eccCCCcCHHHHHH---HHHhcCCCchHHHHHhCCC--CCCHHH-HH------HHHHHHH--HHHHhccccccc-ccCCC Confidence 44445556555554 4566799998888887654 332211 10 0000000 000000000000 00111 Q ss_pred CCccCCccccccc Q lcl|Aclame:pro 427 ASLDQSPPASVPG 439 (518) Q Consensus 427 ~~~~~~~~~~~~~ 439 (518) .+++++..++.++ T Consensus 462 ~~~~~~~~~~~~~ 474 (474) T protein:vir:95 462 AQQQERSNDKESE 474 (474) T ss_pred CcCCCCCccCCCC Confidence 1111111111111 No 204 >protein:vir:95899 Length: 474 # NCBI annotation: ORF006 # Family: family:all:125 # MgeID: mge:1588 # MgeName: 71 # Cross-refs: genbank:acc:YP_240382;genbank:gi:66396046;genbank:GeneID:5133410 Probab=97.82 E-value=1.7e-05 Score=46.78 Aligned_cols=372 Identities=12% Similarity=0.016 Sum_probs=163.9 Q ss_pred CCCCCCCCCccccccccchhhhhhhccCccCCcccCccchhhHHHHhhhHHHHHHHHHHHHhhccCceEEEEecCCceee Q lcl|Aclame:pro 1 MLLANGQTLSAPAMAELSPQMQDSYYYAPAVGMQLERQFSLYGGIYKNQPWVRTVIAKRAQALARLPVKCMFTSGDTETE 80 (518) Q Consensus 1 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~v~~ia~~ia~lp~~v~~~~~~~~~~ 80 (518) -++.++....... .......+ .-..++.....|+..+..+-+-|..+...++. T Consensus 58 ~i~~~~~~~~~~~-----------------~~~~~~~~------~ki~~n~~k~Iv~~~~~yl~g~p~~~~~~~~~---- 110 (474) T protein:vir:95 58 DINYQAYKQDLHG-----------------NIDYTKPD------WRITTNFHQNLVDQKVSYVAGKPVTYAHDDDK---- 110 (474) T ss_pred ccccccchhhhcc-----------------cccccccc------cccccchHHHHHHhhhhhhcccCceeccCChH---- Confidence 1111111000000 00000000 00123456677888888888888876432211 Q ss_pred ecchHHHHHhhccCccCCHHHHHHHHHHHHHHcCCeeEEeeeCCCCceeeeeeeCCcceEEEeccC-cceEEEEeeccCC Q lcl|Aclame:pro 81 EHDTGYAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQKNKSGTPEKLMPMHPSRVAIKRNSR-TGRYEYYFQAGAG 159 (518) Q Consensus 81 ~~~~~~~~l~~~PN~~~t~~~f~~~~~~~~ll~G~~~~~i~~~~~G~~~~l~~l~p~~v~~~~~~~-~~~~~~~~~~~~~ 159 (518) ....+..++. | ........++.+++.+|.+|..+.++.+|.+ .+..++|..+.++++.. .+.....+..... T Consensus 111 -~~~~l~~~~~--n---~~~~~~~~l~~~~~~~G~~~~~~~~d~~~~~-~i~~~~p~~~~~v~d~~~~~~~~a~ir~~~~ 183 (474) T protein:vir:95 111 -VLDVIHQVLD--T---RWDNKLIDILTAASNKGIDWLQVYINEDGEL-KLFRVPAEQAIPIWTDKEREQLNAFIRIFTF 183 (474) T ss_pred -HHHHHHHHHh--c---cHHHHHHHHHHHHhhCCeEEEEeeeCCCCce-EEEEEcccceEEEEcCCCCCceEEEEEEEee Confidence 1122233332 2 3455556678899999999999888888865 57778899888887643 1211111100001 Q ss_pred CC-ceeEEEeeeeeEEeecCC---------------------C---------CcccccchHHHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 160 VG-TQLVSFADDEVVPIRFFN---------------------P---------DGLERGLSLMESLKSTIFSEDSSRNATA 208 (518) Q Consensus 160 ~~-~~~~~~~~~~vih~~~~~---------------------~---------~~~~~G~s~~~~~~~~i~~~~~~~~~~~ 208 (518) .+ .....+.+..+.++...+ + .+...|.|-+......++....+..-.. T Consensus 184 ~~~~~~~vy~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vPvv~~~nn~~~~~d~e~v~~liDa~d~~~S~~~ 263 (474) T protein:vir:95 184 NGETKVEYWTAETVTYYVYENGGLIPDFYYGDEHIQTHFSTGSWERVPFIAFKNNPEEVSDIWMYKSFVDAIDKRLSDVQ 263 (474) T ss_pred cCeeEEEEEeCCeEEEEEEcCCceeeccccccccccCcccccCCCccceEEecCCCCCCCchHHHHHHHHHHHHHHHHHH Confidence 11 111112222232221100 0 0113477777777777777666655556 Q ss_pred HHHHccCCcceeeeeCCcCCHHHHHHHHHHHHHHhcCccccccceeccCCcccccccCChhhHHHHHHHHHHHHHHHHHh Q lcl|Aclame:pro 209 AMWKNAGRPNLVLRHEKRLSPEAQQRLREQFDRAHAGSSNTGKTMVVEEGMEPIPLQLTAVEMQFIEARQLNREEVCGVY 288 (518) Q Consensus 209 ~~~~ng~~p~gil~~~~~~~~e~~~~~~~~~~~~~~g~~n~g~~~vl~~g~~~~~~~~~~~d~q~~e~~~~~~~~Ia~~f 288 (518) +.+...+.|-.+++.- +.+....+...+ ...+++.++++.+...++.......+....+...+.|...- T Consensus 264 ~~~~~~~~p~lv~~g~---~~~~~~~~~~~~--------~~~~~i~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~I~~~s 332 (474) T protein:vir:95 264 NMFDESVELIYILRGY---EGEDLSEFMEGL--------KYYKAINVSSDGGVETIQVEVPVASTKEYLDMMRAYIVEFG 332 (474) T ss_pred HHHHHhhcchhhhcCC---Ccccccchhhhh--------hccceeeccCCCceeEEeccCCHHHHHHHHHHHHHHHHHHh Confidence 6666666676555432 112222222221 12345666666555555555556667777888888999999 Q ss_pred ccchHhhccccccccccHHHH-------------HHHHHHHHHHHHHHHHHHHHHhhhcchhhccceeeechhhhhccCH Q lcl|Aclame:pro 289 DIAPPIVHILDRATFSNISAQ-------------MRAFYRDTMAIPIARIQSAMDKYVGQYWVRKNRMKFDIDDVIQPDW 355 (518) Q Consensus 289 gVpp~~lg~~~~~~~s~~e~~-------------~~~~~~~~l~P~~~~ie~~ln~~l~~~~~~~~~~~fd~~~l~~~d~ 355 (518) ++|..-....+ ++ .+..+. ....+...|+-.++.|... + ........+++.+..-+..|. T Consensus 333 ~~p~~~~~~~~-~n-~Sg~Alk~~~~~l~~k~~~~~~~~~~~l~~~~~~i~~~----~-g~~~d~~~i~i~f~~~~p~~~ 405 (474) T protein:vir:95 333 QGVDFQTDKFG-SA-TSGIALKFLYTNLNLKANKLKNKANVALQELMQFILDF----N-KIKLDAKEIEITFNFNVMVND 405 (474) T ss_pred CCcCccccccc-cc-cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----h-CCCcccceeeEEecCCCccCH Confidence 98854332111 11 111111 1122222222222222211 1 111122234444555566676 Q ss_pred HHHHHHHHHHHhCCCcCHHHHHHHHhCCCCCCccCceeeecccccccccccccCCCCCCCCCCCCcccCCCCCccCCccc Q lcl|Aclame:pro 356 EAKSESTQKMVNSGVATPNEGREIMGLPRSDDPKADELYANSALQPLGATPDGAVEGEEAPAPKRPASTPVASLDQSPPA 435 (518) Q Consensus 356 ~~~~~~~~~~~~~g~~T~NE~R~~~g~~pi~~~~gD~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 435 (518) .+.++. +..+|+++..-+++.+++ ++++.. ++ ..+........ +..+...... .....+..++.+ T Consensus 406 ~e~a~~---~~~~giiS~et~~~~lp~--v~D~~~-E~------eri~~E~~~~~--~~~~~~~~~~-~~~~~~~~~~~~ 470 (474) T protein:vir:95 406 LEQSQI---GAQSQYLSKETLVRHHPW--VDDPKA-EL------ERLDEEQLELN--KQLPNLDDGG-ADGAQQQQQSEN 470 (474) T ss_pred HHHHHH---HHHcCCCChHHHHHhCCC--CCCHHH-HH------HHHHHHHHHHH--hhcccccccc-CCCCCCcCCCCc Confidence 666655 445799999888888754 332210 00 00000000000 0000000000 000000000000 Q ss_pred cccccChhhhc Q lcl|Aclame:pro 436 SVPGLSPTNSD 446 (518) Q Consensus 436 ~~~~~~~~~~~ 446 (518) .. . + T Consensus 471 ~e-----~--~ 474 (474) T protein:vir:95 471 NQ-----S--K 474 (474) T ss_pred cc-----c--C Confidence 00 0 0 No 205 >protein:vir:96266 Length: 474 # NCBI annotation: ORF007 # Family: family:all:125 # MgeID: mge:1612 # MgeName: ROSA # Cross-refs: genbank:acc:YP_240308;genbank:gi:66395972;genbank:GeneID:5133343 Probab=97.82 E-value=1.7e-05 Score=46.78 Aligned_cols=372 Identities=12% Similarity=0.016 Sum_probs=163.9 Q ss_pred CCCCCCCCCccccccccchhhhhhhccCccCCcccCccchhhHHHHhhhHHHHHHHHHHHHhhccCceEEEEecCCceee Q lcl|Aclame:pro 1 MLLANGQTLSAPAMAELSPQMQDSYYYAPAVGMQLERQFSLYGGIYKNQPWVRTVIAKRAQALARLPVKCMFTSGDTETE 80 (518) Q Consensus 1 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~v~~ia~~ia~lp~~v~~~~~~~~~~ 80 (518) -++.++....... .......+ .-..++.....|+..+..+-+-|..+...++. T Consensus 58 ~i~~~~~~~~~~~-----------------~~~~~~~~------~ki~~n~~k~Iv~~~~~yl~g~p~~~~~~~~~---- 110 (474) T protein:vir:96 58 DINYQAYKQDLHG-----------------NIDYTKPD------WRITTNFHQNLVDQKVSYVAGKPVTYAHDDDK---- 110 (474) T ss_pred ccccccchhhhcc-----------------cccccccc------cccccchHHHHHHhhhhhhcccCceeccCChH---- Confidence 1111111000000 00000000 00123456677888888888888876432211 Q ss_pred ecchHHHHHhhccCccCCHHHHHHHHHHHHHHcCCeeEEeeeCCCCceeeeeeeCCcceEEEeccC-cceEEEEeeccCC Q lcl|Aclame:pro 81 EHDTGYAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQKNKSGTPEKLMPMHPSRVAIKRNSR-TGRYEYYFQAGAG 159 (518) Q Consensus 81 ~~~~~~~~l~~~PN~~~t~~~f~~~~~~~~ll~G~~~~~i~~~~~G~~~~l~~l~p~~v~~~~~~~-~~~~~~~~~~~~~ 159 (518) ....+..++. | ........++.+++.+|.+|..+.++.+|.+ .+..++|..+.++++.. .+.....+..... T Consensus 111 -~~~~l~~~~~--n---~~~~~~~~l~~~~~~~G~~~~~~~~d~~~~~-~i~~~~p~~~~~v~d~~~~~~~~a~ir~~~~ 183 (474) T protein:vir:96 111 -VLDVIHQVLD--T---RWDNKLIDILTAASNKGIDWLQVYINEDGEL-KLFRVPAEQAIPIWTDKEREQLNAFIRIFTF 183 (474) T ss_pred -HHHHHHHHHh--c---cHHHHHHHHHHHHhhCCeEEEEeeeCCCCce-EEEEEcccceEEEEcCCCCCceEEEEEEEee Confidence 1122233332 2 3455556678899999999999888888865 57778899888887643 1211111100001 Q ss_pred CC-ceeEEEeeeeeEEeecCC---------------------C---------CcccccchHHHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 160 VG-TQLVSFADDEVVPIRFFN---------------------P---------DGLERGLSLMESLKSTIFSEDSSRNATA 208 (518) Q Consensus 160 ~~-~~~~~~~~~~vih~~~~~---------------------~---------~~~~~G~s~~~~~~~~i~~~~~~~~~~~ 208 (518) .+ .....+.+..+.++...+ + .+...|.|-+......++....+..-.. T Consensus 184 ~~~~~~~vy~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vPvv~~~nn~~~~~d~e~v~~liDa~d~~~S~~~ 263 (474) T protein:vir:96 184 NGETKVEYWTAETVTYYVYENGGLIPDFYYGDEHIQTHFSTGSWERVPFIAFKNNPEEVSDIWMYKSFVDAIDKRLSDVQ 263 (474) T ss_pred cCeeEEEEEeCCeEEEEEEcCCceeeccccccccccCcccccCCCccceEEecCCCCCCCchHHHHHHHHHHHHHHHHHH Confidence 11 111112222232221100 0 0113477777777777777666655556 Q ss_pred HHHHccCCcceeeeeCCcCCHHHHHHHHHHHHHHhcCccccccceeccCCcccccccCChhhHHHHHHHHHHHHHHHHHh Q lcl|Aclame:pro 209 AMWKNAGRPNLVLRHEKRLSPEAQQRLREQFDRAHAGSSNTGKTMVVEEGMEPIPLQLTAVEMQFIEARQLNREEVCGVY 288 (518) Q Consensus 209 ~~~~ng~~p~gil~~~~~~~~e~~~~~~~~~~~~~~g~~n~g~~~vl~~g~~~~~~~~~~~d~q~~e~~~~~~~~Ia~~f 288 (518) +.+...+.|-.+++.- +.+....+...+ ...+++.++++.+...++.......+....+...+.|...- T Consensus 264 ~~~~~~~~p~lv~~g~---~~~~~~~~~~~~--------~~~~~i~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~I~~~s 332 (474) T protein:vir:96 264 NMFDESVELIYILRGY---EGEDLSEFMEGL--------KYYKAINVSSDGGVETIQVEVPVASTKEYLDMMRAYIVEFG 332 (474) T ss_pred HHHHHhhcchhhhcCC---Ccccccchhhhh--------hccceeeccCCCceeEEeccCCHHHHHHHHHHHHHHHHHHh Confidence 6666666676555432 112222222221 12345666666555555555556667777888888999999 Q ss_pred ccchHhhccccccccccHHHH-------------HHHHHHHHHHHHHHHHHHHHHhhhcchhhccceeeechhhhhccCH Q lcl|Aclame:pro 289 DIAPPIVHILDRATFSNISAQ-------------MRAFYRDTMAIPIARIQSAMDKYVGQYWVRKNRMKFDIDDVIQPDW 355 (518) Q Consensus 289 gVpp~~lg~~~~~~~s~~e~~-------------~~~~~~~~l~P~~~~ie~~ln~~l~~~~~~~~~~~fd~~~l~~~d~ 355 (518) ++|..-....+ ++ .+..+. ....+...|+-.++.|... + ........+++.+..-+..|. T Consensus 333 ~~p~~~~~~~~-~n-~Sg~Alk~~~~~l~~k~~~~~~~~~~~l~~~~~~i~~~----~-g~~~d~~~i~i~f~~~~p~~~ 405 (474) T protein:vir:96 333 QGVDFQTDKFG-SA-TSGIALKFLYTNLNLKANKLKNKANVALQELMQFILDF----N-KIKLDAKEIEITFNFNVMVND 405 (474) T ss_pred CCcCccccccc-cc-cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----h-CCCcccceeeEEecCCCccCH Confidence 98854332111 11 111111 1122222222222222211 1 111122234444555566676 Q ss_pred HHHHHHHHHHHhCCCcCHHHHHHHHhCCCCCCccCceeeecccccccccccccCCCCCCCCCCCCcccCCCCCccCCccc Q lcl|Aclame:pro 356 EAKSESTQKMVNSGVATPNEGREIMGLPRSDDPKADELYANSALQPLGATPDGAVEGEEAPAPKRPASTPVASLDQSPPA 435 (518) Q Consensus 356 ~~~~~~~~~~~~~g~~T~NE~R~~~g~~pi~~~~gD~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 435 (518) .+.++. +..+|+++..-+++.+++ ++++.. ++ ..+........ +..+...... .....+..++.+ T Consensus 406 ~e~a~~---~~~~giiS~et~~~~lp~--v~D~~~-E~------eri~~E~~~~~--~~~~~~~~~~-~~~~~~~~~~~~ 470 (474) T protein:vir:96 406 LEQSQI---GAQSQYLSKETLVRHHPW--VDDPKA-EL------ERLDEEQLELN--KQLPNLDDGG-ADGAQQQQQSEN 470 (474) T ss_pred HHHHHH---HHHcCCCChHHHHHhCCC--CCCHHH-HH------HHHHHHHHHHH--hhcccccccc-CCCCCCcCCCCc Confidence 666655 445799999888888754 332210 00 00000000000 0000000000 000000000000 Q ss_pred cccccChhhhc Q lcl|Aclame:pro 436 SVPGLSPTNSD 446 (518) Q Consensus 436 ~~~~~~~~~~~ 446 (518) .. . + T Consensus 471 ~e-----~--~ 474 (474) T protein:vir:96 471 NQ-----S--K 474 (474) T ss_pred cc-----c--C Confidence 00 0 0 No 206 >protein:vir:733 Length: 453 # NCBI annotation: minor structural protein 1 # Family: family:all:125 # MgeID: mge:14 # MgeName: Tuc2009 # Cross-refs: genbank:acc:NP_108710;genbank:gi:13487832;genbank:GeneID:920851 Probab=97.79 E-value=1.9e-05 Score=46.43 Aligned_cols=403 Identities=10% Similarity=0.020 Sum_probs=174.8 Q ss_pred CCCCCCCCCcccccc-------ccchhhhhhhccCccCCcccCccc--hhhHHHHhhhHHHHHHHHHHHHhhccCceEEE Q lcl|Aclame:pro 1 MLLANGQTLSAPAMA-------ELSPQMQDSYYYAPAVGMQLERQF--SLYGGIYKNQPWVRTVIAKRAQALARLPVKCM 71 (518) Q Consensus 1 ~~f~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~v~~~v~~ia~~ia~lp~~v~ 71 (518) |.|-+.+........ ...+.+.....+..+...-..... ......-...++....|+..+.-+-+-|+.+. T Consensus 9 ~~~~~~~~~~~~~i~~~i~~~~~~~~r~~~~~~yy~g~~~i~~~~~~~~~~~~~ki~~n~~~~ivd~~~~~l~g~~~~~~ 88 (453) T protein:vir:73 9 MTYSRDEEITDKVVNDFMKKHQEEVERYEYLGNMYKGIMEISSQKAKDSWKPDNRLTNNFAKYIVDTFVGYFNGIPIKKT 88 (453) T ss_pred eeccccccCCHHHHHHHHHHHHHHHHHHHHHHHHhccccchhcCCCCCccCccceeecchHHHHHHHhhhhhcccCceee Confidence 444433333222110 011111111111100000000000 00000011235666777877777777776653 Q ss_pred EecCCceeeecchHHHHHhhccCccCCHHHHHHHHHHHHHHcCCeeEEeeeCCCCceeeeeeeCCcceEEEeccCcce-E Q lcl|Aclame:pro 72 FTSGDTETEEHDTGYAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQKNKSGTPEKLMPMHPSRVAIKRNSRTGR-Y 150 (518) Q Consensus 72 ~~~~~~~~~~~~~~~~~l~~~PN~~~t~~~f~~~~~~~~ll~G~~~~~i~~~~~G~~~~l~~l~p~~v~~~~~~~~~~-~ 150 (518) ..++ .....+..++. ..........+..+.+.+|.+|..+..+.+|.+ .+..++|..+.+.+++.... . T Consensus 89 ~~d~-----~~~~~l~~~~~----~n~~~~~~~~~~~~~~~~G~~~~~v~~d~~~~~-~i~~~~p~~~~~v~dd~~~~~~ 158 (453) T protein:vir:73 89 HDDK-----SVLEAMQLFDN----LNDMEDEESELAKIACVYGRAYELMYQNESTES-EVIYCSPLNVFMVYDDSIKQKP 158 (453) T ss_pred cCCh-----HHHHHHHHHHH----hcChhHHHHHHHHHHHhcCeEEEEEEeCCCCce-EEEEEcccceEEEEeCCCCcee Confidence 2111 11112222222 224445566788899999999999988888876 46677888888777654221 1 Q ss_pred EEEe-eccCCCCce-eEEEeeeeeEEeecC-----------CC---------CcccccchHHHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 151 EYYF-QAGAGVGTQ-LVSFADDEVVPIRFF-----------NP---------DGLERGLSLMESLKSTIFSEDSSRNATA 208 (518) Q Consensus 151 ~~~~-~~~~~~~~~-~~~~~~~~vih~~~~-----------~~---------~~~~~G~s~~~~~~~~i~~~~~~~~~~~ 208 (518) .+.+ ......+.. ...+....++++... ++ .+...|.|.+..+...++....+..... T Consensus 159 ~~~i~~~~~~~~~~~~~vyt~~~i~~~~~~~~~~~~~~~~~~~~g~vPvv~~~n~~~g~s~~~~v~~liDa~~~~~S~~~ 238 (453) T protein:vir:73 159 LFAVYYGFDEEGNLSGTVYTLLETISITGKAGEVKFGESTYNVYSDLPIVEYNFNEERQSIFEPVHSLINSYNKVTSEKA 238 (453) T ss_pred EEEEEEEEecCceEEEEEEeCCeEEEEEecCCceEEccceeccCCceeEEEecCCCCCCcchhhHHHHHHHHHHHHHHHH Confidence 1111 001111111 111222222222110 00 0113577888877777777666666666 Q ss_pred HHHHccCCcceeeeeCCcCCHHHHHHHHHHHHHHhcCccccccceeccCCcccccccCChhhHHHHHHHHHHHHHHHHHh Q lcl|Aclame:pro 209 AMWKNAGRPNLVLRHEKRLSPEAQQRLREQFDRAHAGSSNTGKTMVVEEGMEPIPLQLTAVEMQFIEARQLNREEVCGVY 288 (518) Q Consensus 209 ~~~~ng~~p~gil~~~~~~~~e~~~~~~~~~~~~~~g~~n~g~~~vl~~g~~~~~~~~~~~d~q~~e~~~~~~~~Ia~~f 288 (518) +..+..+.|..+++-. ...++....++..-.- .......+.....+.+.++..++....+..+....+...+.|+..- T Consensus 239 ~~~~~~~~~~l~~~g~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~~~l~~~I~~~s 316 (453) T protein:vir:73 239 NDVEYFSDQYLVFLGA-EVDEEDAKNIKDNRLI-NFFDKNSNGQGTNAAKVDVKFLDKPDSDVQTENLLNRLERSIFQFT 316 (453) T ss_pred HHHHHhccceeeeecC-CCCchhhhcccccccc-cccccccccccccccCceeEEeeecCCHHHHHHHHHHHHHHHHHHh Confidence 6666767776666432 3344444433321100 0111122223333445455444444445556677788888888888 Q ss_pred ccchHhhccccccccccHH----------HHHHHHHHHHHHHHHHHHHHHHHhhhcchhhccceeeechhhhhccCHHHH Q lcl|Aclame:pro 289 DIAPPIVHILDRATFSNIS----------AQMRAFYRDTMAIPIARIQSAMDKYVGQYWVRKNRMKFDIDDVIQPDWEAK 358 (518) Q Consensus 289 gVpp~~lg~~~~~~~s~~e----------~~~~~~~~~~l~P~~~~ie~~ln~~l~~~~~~~~~~~fd~~~l~~~d~~~~ 358 (518) ++|..-....++.+....+ +.....+...+.-.++.+...++..-... ....+++.+..-+..|..+. T Consensus 317 ~~p~~~~~~~gn~Sg~Al~~~~~~l~~ka~~~~~~~~~~l~~~~~li~~~~~~~~~~~--~~~~i~v~f~~~~p~~~~~~ 394 (453) T protein:vir:73 317 MAANISDENFGNSSGVALAYKLQAMSNLALSFQRKFQSALNRRYSLWSSLSTNASNKD--AWKDIEYTFTRNEPKDIKEQ 394 (453) T ss_pred CCcccCcccccCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcc--ccccceEEeCCCCCCCHHHH Confidence 8875322211111111111 11122333333333333332222111111 11234555567778899999 Q ss_pred HHHHHHHHhCCCcCHHHHHHHHhCCCCCCccCceeeecccccccccccccCCCCCCCCCCCCcccCCCCCccCCcccccc Q lcl|Aclame:pro 359 SESTQKMVNSGVATPNEGREIMGLPRSDDPKADELYANSALQPLGATPDGAVEGEEAPAPKRPASTPVASLDQSPPASVP 438 (518) Q Consensus 359 ~~~~~~~~~~g~~T~NE~R~~~g~~pi~~~~gD~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 438 (518) ++.+.+++ |+++..-+.+.+++ ++++... + .-+..........+..... .++.+... T Consensus 395 a~~~~k~~--giis~et~~~~~~~--~~d~~~E-~------~ri~~E~~~~~~~~~~~~~------------~~~~~~~~ 451 (453) T protein:vir:73 395 AETANILK--GITSEETALSVISV--IPDVQAE-M------EKIKKKKLLQLSLTRTSNL------------VRMKQMRG 451 (453) T ss_pred HHHHHHHh--ccCcHHHHHHhCCC--CCCHHHH-H------HHHHHHHHHHHHHHHhccC------------Ccchhhhc Confidence 99999886 78887777777654 2322111 0 0000000000000000000 00000000 Q ss_pred cc Q lcl|Aclame:pro 439 GL 440 (518) Q Consensus 439 ~~ 440 (518) .. T Consensus 452 ~~ 453 (453) T protein:vir:73 452 NL 453 (453) T ss_pred CC Confidence 00 No 207 >protein:vir:94498 Length: 474 # NCBI annotation: ORF007 # Family: family:all:125 # MgeID: mge:1508 # MgeName: 88 # Cross-refs: genbank:acc:YP_240672;genbank:gi:66396340;genbank:GeneID:5133762 Probab=97.67 E-value=3.1e-05 Score=45.31 Aligned_cols=391 Identities=11% Similarity=0.006 Sum_probs=164.4 Q ss_pred CCCCCCCCCcc-----ccccccchhh---hhhhccCccCCcccCc---c--chhh-HHHHhhhHHHHHHHHHHHHhhccC Q lcl|Aclame:pro 1 MLLANGQTLSA-----PAMAELSPQM---QDSYYYAPAVGMQLER---Q--FSLY-GGIYKNQPWVRTVIAKRAQALARL 66 (518) Q Consensus 1 ~~f~~~~~~~~-----~~~~~~~~~~---~~~~~~~~~~~~~~~~---~--~~~~-~~~~~~~~~v~~~v~~ia~~ia~l 66 (518) +.+-....... .......+.+ ...+.+--..-.+..+ . .... ...-...+....+|+..+..+-+- T Consensus 21 ~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~YY~g~~~i~~~~~~~~~~~~~~~~~~~~ki~~n~~k~Ivd~~~~~l~g~ 100 (474) T protein:vir:94 21 LKPQFETQEEMIVRLIDDHRKQLDKITVGQRYYDKDNDIVKQMKKVDVHGNIDYDKPDWRITTNFHQNLVDQKVSYVASK 100 (474) T ss_pred hhhcccCHHHHHHHHHHHHHHHHHHHHHHHHHhccccchhcccchhccccccccccCcceeecchHHHHHHHHHhhhhcC Confidence 00000000000 0000000000 0001000000000000 0 0000 000012356677888888888888 Q ss_pred ceEEEEecCCceeeecchHHHHHhhccCccCCHHHHHHHHHHHHHHcCCeeEEeeeCCCCceeeeeeeCCcceEEEeccC Q lcl|Aclame:pro 67 PVKCMFTSGDTETEEHDTGYAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQKNKSGTPEKLMPMHPSRVAIKRNSR 146 (518) Q Consensus 67 p~~v~~~~~~~~~~~~~~~~~~l~~~PN~~~t~~~f~~~~~~~~ll~G~~~~~i~~~~~G~~~~l~~l~p~~v~~~~~~~ 146 (518) |+.+-..++ .....+..++. | ........++.+.+.+|.+|..+..+.+|.+ .+..++|..+.+.++.. T Consensus 101 p~~~~~~d~-----~~~~~l~~~~~--n---~~~~~~~e~~~~~~~~G~~~~~~~~d~~~~~-~i~~~~p~~~~~v~d~~ 169 (474) T protein:vir:94 101 PVTYSCEDE-----NVLKVIHDVLD--T---RWDNKLIDILTATSNKGIDWLQVYINENGEM-KLFRVPAEQAIPIWVDK 169 (474) T ss_pred CceeccCcH-----HHHHHHHHHHh--c---cHHHHHHHHHHHHhhcCceEEEEEecCCCee-EEEEEcccceEEEEcCC Confidence 887632211 11122222332 2 2345555677889999999999888888864 57778899988887643 Q ss_pred -cceEEEEeeccCCCCceeE-EEeee-----------------------------------eeEEeecCCCCcccccchH Q lcl|Aclame:pro 147 -TGRYEYYFQAGAGVGTQLV-SFADD-----------------------------------EVVPIRFFNPDGLERGLSL 189 (518) Q Consensus 147 -~~~~~~~~~~~~~~~~~~~-~~~~~-----------------------------------~vih~~~~~~~~~~~G~s~ 189 (518) .+...+.+......+.... .+... .|++|+.+ .+|.|- T Consensus 170 ~~~~~~~~ir~~~~~~~~~~~~yt~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~g~vPvv~~~nn-----~~g~sd 244 (474) T protein:vir:94 170 EREELKSFIRYYKFNNEEKVEFWTDTTVTYYVLENGGLIPDYYYGANHVQSHFSNGNWGRVPFIAFKNN-----PEEVSD 244 (474) T ss_pred CCCceEEEEEEEEecCeEEEEEEeCCeEEEEEEcCCccccccccCcCcccccccccCCCccceEEecCC-----cCCCCc Confidence 2222111111000000001 11111 23333321 358888 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHccCCcceeeeeCCcCCHHHHHHHHHHHHHHhcCccccccceeccCCcccccccCChh Q lcl|Aclame:pro 190 MESLKSTIFSEDSSRNATAAMWKNAGRPNLVLRHEKRLSPEAQQRLREQFDRAHAGSSNTGKTMVVEEGMEPIPLQLTAV 269 (518) Q Consensus 190 ~~~~~~~i~~~~~~~~~~~~~~~ng~~p~gil~~~~~~~~e~~~~~~~~~~~~~~g~~n~g~~~vl~~g~~~~~~~~~~~ 269 (518) +..+...++....+.....+.++..+.|..+++--.....+ .+.... ...+++.+++|.+...++.... T Consensus 245 ~e~v~~liDa~n~~~s~~~~~~~~~~~~~lv~~g~~~~~~~---~~~~~~--------~~~~~i~~~~~~~~~~l~~~~~ 313 (474) T protein:vir:94 245 IWMYKSIIDAIDKRLSDAQNMFDESVELIYILKGYEGEDLE---EFMRGL--------KYYKAINVDGDGGVETIQVEVP 313 (474) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCceeeeecCCcccch---hhhhhh--------hccceeeccCCCceeEEeecCC Confidence 88888888777766666666677777776665533221111 111111 2345566666666555554445 Q ss_pred hHHHHHHHHHHHHHHHHHhccchHhhc-cccccccccHH----------HHHHHHHHHHHHHHHHHHHHHHHhhhcchhh Q lcl|Aclame:pro 270 EMQFIEARQLNREEVCGVYDIAPPIVH-ILDRATFSNIS----------AQMRAFYRDTMAIPIARIQSAMDKYVGQYWV 338 (518) Q Consensus 270 d~q~~e~~~~~~~~Ia~~fgVpp~~lg-~~~~~~~s~~e----------~~~~~~~~~~l~P~~~~ie~~ln~~l~~~~~ 338 (518) ...+.+..+...+.|...-++|..-.+ ..++.+.--.. ......+..+|+-+++.|...++ ... T Consensus 314 ~~~~~~~~~~l~~~I~~~s~~p~~~~~~~~~n~Sg~Al~~~~~~l~~k~~~k~~~~~~~l~~~~~li~~~~~-----~~~ 388 (474) T protein:vir:94 314 VSSTKEYIDLMRVYIMEFGQGVDFQTDKFGSAPSGIALKFLYGNLDLKANKLKNKATVAIQELISFIIDFNN-----LKT 388 (474) T ss_pred HHHHHHHHHHHHHHHHHHhCccccCccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-----CCc Confidence 555666777778888888888753321 11111110000 11112233333333333332211 111 Q ss_pred ccceeeechhhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHHhCCCCCCccCceeeeccccccccccccc-CCCCCCCCC Q lcl|Aclame:pro 339 RKNRMKFDIDDVIQPDWEAKSESTQKMVNSGVATPNEGREIMGLPRSDDPKADELYANSALQPLGATPDG-AVEGEEAPA 417 (518) Q Consensus 339 ~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~T~NE~R~~~g~~pi~~~~gD~~~~~~n~~~~~~~~~~-~~~~~~~~~ 417 (518) ....+++.++.-+..|..+.+ +.++.+|+++..-++++++. ++++.. + +...... ....+..+. T Consensus 389 d~~~i~v~f~~~~p~~~~e~a---~~~~~~g~iS~et~l~~l~~--v~D~~~-E---------~eri~~E~~~~~~~~~~ 453 (474) T protein:vir:94 389 DVKDIEISFNFNRMMNDAEQS---QIIAQSQYLSRETLVKSSPL--VDDYKA-E---------LERIEQEQMEYNKQLPN 453 (474) T ss_pred ccceeeEEeccCcccCHHHHH---HHHHHcCCCCHHHHHHhCCC--CCCHHH-H---------HHHHHHHHHHHHhhccc Confidence 112233444444445555444 44566799999888888754 332211 1 0000000 000000000 Q ss_pred CCCcccCCCCCccCCccccccc Q lcl|Aclame:pro 418 PKRPASTPVASLDQSPPASVPG 439 (518) Q Consensus 418 ~~~~~~~~~~~~~~~~~~~~~~ 439 (518) ... ...+...+++.+.++..+ T Consensus 454 ~~~-~~~~~~~~~~~~~~~~~e 474 (474) T protein:vir:94 454 LDD-GGADGAQQQEGSNNKESE 474 (474) T ss_pred cCC-CCCCCcccCCCCcccccC Confidence 000 000000111111111101 No 208 >protein:vir:97447 Length: 474 # NCBI annotation: ORF007 # Family: family:all:125 # MgeID: mge:1676 # MgeName: 92 # Cross-refs: genbank:acc:YP_240744;genbank:gi:66396413;genbank:GeneID:5133803 Probab=97.67 E-value=3.1e-05 Score=45.31 Aligned_cols=391 Identities=11% Similarity=0.006 Sum_probs=164.4 Q ss_pred CCCCCCCCCcc-----ccccccchhh---hhhhccCccCCcccCc---c--chhh-HHHHhhhHHHHHHHHHHHHhhccC Q lcl|Aclame:pro 1 MLLANGQTLSA-----PAMAELSPQM---QDSYYYAPAVGMQLER---Q--FSLY-GGIYKNQPWVRTVIAKRAQALARL 66 (518) Q Consensus 1 ~~f~~~~~~~~-----~~~~~~~~~~---~~~~~~~~~~~~~~~~---~--~~~~-~~~~~~~~~v~~~v~~ia~~ia~l 66 (518) +.+-....... .......+.+ ...+.+--..-.+..+ . .... ...-...+....+|+..+..+-+- T Consensus 21 ~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~YY~g~~~i~~~~~~~~~~~~~~~~~~~~ki~~n~~k~Ivd~~~~~l~g~ 100 (474) T protein:vir:97 21 LKPQFETQEEMIVRLIDDHRKQLDKITVGQRYYDKDNDIVKQMKKVDVHGNIDYDKPDWRITTNFHQNLVDQKVSYVASK 100 (474) T ss_pred hhhcccCHHHHHHHHHHHHHHHHHHHHHHHHHhccccchhcccchhccccccccccCcceeecchHHHHHHHHHhhhhcC Confidence 00000000000 0000000000 0001000000000000 0 0000 000012356677888888888888 Q ss_pred ceEEEEecCCceeeecchHHHHHhhccCccCCHHHHHHHHHHHHHHcCCeeEEeeeCCCCceeeeeeeCCcceEEEeccC Q lcl|Aclame:pro 67 PVKCMFTSGDTETEEHDTGYAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQKNKSGTPEKLMPMHPSRVAIKRNSR 146 (518) Q Consensus 67 p~~v~~~~~~~~~~~~~~~~~~l~~~PN~~~t~~~f~~~~~~~~ll~G~~~~~i~~~~~G~~~~l~~l~p~~v~~~~~~~ 146 (518) |+.+-..++ .....+..++. | ........++.+.+.+|.+|..+..+.+|.+ .+..++|..+.+.++.. T Consensus 101 p~~~~~~d~-----~~~~~l~~~~~--n---~~~~~~~e~~~~~~~~G~~~~~~~~d~~~~~-~i~~~~p~~~~~v~d~~ 169 (474) T protein:vir:97 101 PVTYSCEDE-----NVLKVIHDVLD--T---RWDNKLIDILTATSNKGIDWLQVYINENGEM-KLFRVPAEQAIPIWVDK 169 (474) T ss_pred CceeccCcH-----HHHHHHHHHHh--c---cHHHHHHHHHHHHhhcCceEEEEEecCCCee-EEEEEcccceEEEEcCC Confidence 887632211 11122222332 2 2345555677889999999999888888864 57778899988887643 Q ss_pred -cceEEEEeeccCCCCceeE-EEeee-----------------------------------eeEEeecCCCCcccccchH Q lcl|Aclame:pro 147 -TGRYEYYFQAGAGVGTQLV-SFADD-----------------------------------EVVPIRFFNPDGLERGLSL 189 (518) Q Consensus 147 -~~~~~~~~~~~~~~~~~~~-~~~~~-----------------------------------~vih~~~~~~~~~~~G~s~ 189 (518) .+...+.+......+.... .+... .|++|+.+ .+|.|- T Consensus 170 ~~~~~~~~ir~~~~~~~~~~~~yt~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~g~vPvv~~~nn-----~~g~sd 244 (474) T protein:vir:97 170 EREELKSFIRYYKFNNEEKVEFWTDTTVTYYVLENGGLIPDYYYGANHVQSHFSNGNWGRVPFIAFKNN-----PEEVSD 244 (474) T ss_pred CCCceEEEEEEEEecCeEEEEEEeCCeEEEEEEcCCccccccccCcCcccccccccCCCccceEEecCC-----cCCCCc Confidence 2222111111000000001 11111 23333321 358888 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHccCCcceeeeeCCcCCHHHHHHHHHHHHHHhcCccccccceeccCCcccccccCChh Q lcl|Aclame:pro 190 MESLKSTIFSEDSSRNATAAMWKNAGRPNLVLRHEKRLSPEAQQRLREQFDRAHAGSSNTGKTMVVEEGMEPIPLQLTAV 269 (518) Q Consensus 190 ~~~~~~~i~~~~~~~~~~~~~~~ng~~p~gil~~~~~~~~e~~~~~~~~~~~~~~g~~n~g~~~vl~~g~~~~~~~~~~~ 269 (518) +..+...++....+.....+.++..+.|..+++--.....+ .+.... ...+++.+++|.+...++.... T Consensus 245 ~e~v~~liDa~n~~~s~~~~~~~~~~~~~lv~~g~~~~~~~---~~~~~~--------~~~~~i~~~~~~~~~~l~~~~~ 313 (474) T protein:vir:97 245 IWMYKSIIDAIDKRLSDAQNMFDESVELIYILKGYEGEDLE---EFMRGL--------KYYKAINVDGDGGVETIQVEVP 313 (474) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCceeeeecCCcccch---hhhhhh--------hccceeeccCCCceeEEeecCC Confidence 88888888777766666666677777776665533221111 111111 2345566666666555554445 Q ss_pred hHHHHHHHHHHHHHHHHHhccchHhhc-cccccccccHH----------HHHHHHHHHHHHHHHHHHHHHHHhhhcchhh Q lcl|Aclame:pro 270 EMQFIEARQLNREEVCGVYDIAPPIVH-ILDRATFSNIS----------AQMRAFYRDTMAIPIARIQSAMDKYVGQYWV 338 (518) Q Consensus 270 d~q~~e~~~~~~~~Ia~~fgVpp~~lg-~~~~~~~s~~e----------~~~~~~~~~~l~P~~~~ie~~ln~~l~~~~~ 338 (518) ...+.+..+...+.|...-++|..-.+ ..++.+.--.. ......+..+|+-+++.|...++ ... T Consensus 314 ~~~~~~~~~~l~~~I~~~s~~p~~~~~~~~~n~Sg~Al~~~~~~l~~k~~~k~~~~~~~l~~~~~li~~~~~-----~~~ 388 (474) T protein:vir:97 314 VSSTKEYIDLMRVYIMEFGQGVDFQTDKFGSAPSGIALKFLYGNLDLKANKLKNKATVAIQELISFIIDFNN-----LKT 388 (474) T ss_pred HHHHHHHHHHHHHHHHHHhCccccCccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-----CCc Confidence 555666777778888888888753321 11111110000 11112233333333333332211 111 Q ss_pred ccceeeechhhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHHhCCCCCCccCceeeeccccccccccccc-CCCCCCCCC Q lcl|Aclame:pro 339 RKNRMKFDIDDVIQPDWEAKSESTQKMVNSGVATPNEGREIMGLPRSDDPKADELYANSALQPLGATPDG-AVEGEEAPA 417 (518) Q Consensus 339 ~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~T~NE~R~~~g~~pi~~~~gD~~~~~~n~~~~~~~~~~-~~~~~~~~~ 417 (518) ....+++.++.-+..|..+.+ +.++.+|+++..-++++++. ++++.. + +...... ....+..+. T Consensus 389 d~~~i~v~f~~~~p~~~~e~a---~~~~~~g~iS~et~l~~l~~--v~D~~~-E---------~eri~~E~~~~~~~~~~ 453 (474) T protein:vir:97 389 DVKDIEISFNFNRMMNDAEQS---QIIAQSQYLSRETLVKSSPL--VDDYKA-E---------LERIEQEQMEYNKQLPN 453 (474) T ss_pred ccceeeEEeccCcccCHHHHH---HHHHHcCCCCHHHHHHhCCC--CCCHHH-H---------HHHHHHHHHHHHhhccc Confidence 112233444444445555444 44566799999888888754 332211 1 0000000 000000000 Q ss_pred CCCcccCCCCCccCCccccccc Q lcl|Aclame:pro 418 PKRPASTPVASLDQSPPASVPG 439 (518) Q Consensus 418 ~~~~~~~~~~~~~~~~~~~~~~ 439 (518) ... ...+...+++.+.++..+ T Consensus 454 ~~~-~~~~~~~~~~~~~~~~~e 474 (474) T protein:vir:97 454 LDD-GGADGAQQQEGSNNKESE 474 (474) T ss_pred cCC-CCCCCcccCCCCcccccC Confidence 000 000000111111111101 No 209 >protein:vir:106571 Length: 499 # NCBI annotation: putative portal protein # Family: family:all:125 # MgeID: mge:1598 # MgeName: Lj965 # Cross-refs: genbank:acc:NP_958580;genbank:gi:41179240;genbank:GeneID:2717107 Probab=97.55 E-value=4.6e-05 Score=44.34 Aligned_cols=405 Identities=13% Similarity=0.078 Sum_probs=166.1 Q ss_pred CC-------------CCCCCCCccccccccchhhhhhhccCccC-CcccCccchhhHHHHhhhHHHHHHHHHHHHhhccC Q lcl|Aclame:pro 1 ML-------------LANGQTLSAPAMAELSPQMQDSYYYAPAV-GMQLERQFSLYGGIYKNQPWVRTVIAKRAQALARL 66 (518) Q Consensus 1 ~~-------------f~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~v~~~v~~ia~~ia~l 66 (518) ++ |-.+.....+.. ..+...+.+.-.. ........ ....-...+....+|+..+.-+-+- T Consensus 9 ~~~~~~~~~~~~i~~~i~~~~~~~~~~----~~l~~Yy~g~~~i~~~~~~~~~--~~~~ki~~n~~~~Iv~~~~~~l~g~ 82 (499) T protein:vir:10 9 LLDDVNEPNIEAINYAIRELQNRKKRL----DKLSDYYNGKQEIEKHEFDNAT--VEAANVMVNHAKYITDMNVGFMTGN 82 (499) T ss_pred HHhhhhcCCHHHHHHHHHHHHHHHHHH----HHHHHHhccccchhcCCcCcCC--CCcceeecchHHHHHHHHhhhhccc Confidence 00 000000000000 0011111111000 00000000 0001112345666788888877777 Q ss_pred ceEEEEecCCceeeecchHHHHHhhccCccCCHHHHHHHHHHHHHHcCCeeEEeeeCCCCce----------------ee Q lcl|Aclame:pro 67 PVKCMFTSGDTETEEHDTGYAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQKNKSGTP----------------EK 130 (518) Q Consensus 67 p~~v~~~~~~~~~~~~~~~~~~l~~~PN~~~t~~~f~~~~~~~~ll~G~~~~~i~~~~~G~~----------------~~ 130 (518) |+.+.-.++. ....+..++.. | ....+...+..+.+.+|.+|.++..+.+|.+ .. T Consensus 83 p~~~~~~~~~-----~~~~l~~~~~~-n---~~~~~~~~~~~~~~~~G~~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~ 153 (499) T protein:vir:10 83 PVKYVAEKGK-----NIDDILEVFNQ-I---DIHKHDIELEKDLSVFGYGYELLYLKKTDPISVRDELGNEKLTPNTELK 153 (499) T ss_pred CceeecCChh-----HHHHHHHHHhh-c---CHhHHHHHHHHHHHhcCceEEEEEecccccccccccccccccccccceE Confidence 8776432211 11122333322 2 3445667788889999999999888777643 34 Q ss_pred eeeeCCcceEEEeccCcce-E---EEEeeccCCCCce---e-EEEeeee------------------------------e Q lcl|Aclame:pro 131 LMPMHPSRVAIKRNSRTGR-Y---EYYFQAGAGVGTQ---L-VSFADDE------------------------------V 172 (518) Q Consensus 131 l~~l~p~~v~~~~~~~~~~-~---~~~~~~~~~~~~~---~-~~~~~~~------------------------------v 172 (518) +..++|..+.++++..... . .+.+......+.. . ..+.+.. | T Consensus 154 ~~~v~p~~~~~v~~d~~~~~~~~~i~~~~~~~~~~~~~~~~~~iyt~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~vPv 233 (499) T protein:vir:10 154 IEVIDPRATVVVCDDTVEHDPLFAVFTQEKKDLEGNTNGYSITVYMPQRIVEYRTKTTMEVSANDPIVYDGENLFGAVPI 233 (499) T ss_pred EEEEcccceEEEecCCCCcceEEEEEEEEEeecCCCceEEEEEEEeCCeEEEEEecCCccccCcceecccccCCCCccce Confidence 6667788777766543321 0 1111111100100 0 1122222 2 Q ss_pred EEeecCCCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHccCCcceeeeeCCcCCHH--HHHHHHHHHHHHhcCccccc Q lcl|Aclame:pro 173 VPIRFFNPDGLERGLSLMESLKSTIFSEDSSRNATAAMWKNAGRPNLVLRHEKRLSPE--AQQRLREQFDRAHAGSSNTG 250 (518) Q Consensus 173 ih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~p~gil~~~~~~~~e--~~~~~~~~~~~~~~g~~n~g 250 (518) ++|++ ...|.|-+..+...++....+.....+.+...+.|-.+++-.. ..+. ....+ ..+ T Consensus 234 v~~~n-----~~~~~~d~e~v~~liD~~~~~~S~~~~~~~~~~~~~lv~~G~~-~~~~~~~~~~~------------~~~ 295 (499) T protein:vir:10 234 IEFRN-----NEERQGDFEQLISLIDAYNLLQTDRISDKEAFVDALLVTFGFG-LGDDKDDIQRL------------KRG 295 (499) T ss_pred EEecC-----CCCCCCchHhHHHHHHHHHHHHHHHHHHHHHhcCceeeeecCc-cccccchhhhh------------hhc Confidence 33322 1347777777777777766666666666777777776665322 1211 11111 112 Q ss_pred cceec--cCCcccccccCChhhHHHHHHHHHHHHHHHHHhccchHhhcc-ccccccccH----------HHHHHHHHHHH Q lcl|Aclame:pro 251 KTMVV--EEGMEPIPLQLTAVEMQFIEARQLNREEVCGVYDIAPPIVHI-LDRATFSNI----------SAQMRAFYRDT 317 (518) Q Consensus 251 ~~~vl--~~g~~~~~~~~~~~d~q~~e~~~~~~~~Ia~~fgVpp~~lg~-~~~~~~s~~----------e~~~~~~~~~~ 317 (518) .+..+ ++|.+++.+........+....+...+.|...-++|..-.+. .++.+.-.. .......+..+ T Consensus 296 ~~~~~~~~~~~d~~~l~~~~~~~~~~~~~~~l~~~I~~~s~~p~~~~~~~~gn~Sg~Al~~~~~~l~~k~~~k~~~~~~~ 375 (499) T protein:vir:10 296 AIEAPPREEGADIEWLTKSFDETQVNLLSQSIENDIHKISYVPNMNDEKFMGNVSGEAMKFKLFGLENLLSIKQRYFFDG 375 (499) T ss_pred ceeccCCCCCCcceEEeccCCHHHHHHHHHHHHHHHHHHhCcccCCchhhcccchHHHHHHHHHHHHHHHHHHHHHHHHH Confidence 23332 345555555544444556666777778888877777422211 111111000 01112233333 Q ss_pred HHHHHHHHHHHHHhhhcchhhccceeeechhhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHHhCCCCCCcc--Cceeee Q lcl|Aclame:pro 318 MAIPIARIQSAMDKYVGQYWVRKNRMKFDIDDVIQPDWEAKSESTQKMVNSGVATPNEGREIMGLPRSDDPK--ADELYA 395 (518) Q Consensus 318 l~P~~~~ie~~ln~~l~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~T~NE~R~~~g~~pi~~~~--gD~~~~ 395 (518) +.-.++.+...++..-. ......+++.+..-+..|..+.++.+.++ .|+++..-++++++. ++++. ..++-- T Consensus 376 l~~~~~li~~~~~~~~~--~~d~~~i~i~f~~~~p~n~~e~~~~~~kl--~g~iS~et~~~~l~~--v~d~~~E~~ri~~ 449 (499) T protein:vir:10 376 LRRRLKLIQTIVNIKGA--NDDASGCKISLVANIPSNLSDVVNNVKNA--DGIIPRKYTYSWLPD--VDNPQDVIDEMNQ 449 (499) T ss_pred HHHHHHHHHHHHhccCC--ccccccceEEeCCCCCCCHHHHHHHHHHH--hccCChHHHHHhCCC--CCCHHHHHHHHHH Confidence 33333333322221100 01112345555666778899999999988 578998888887654 33221 111100 Q ss_pred ccc-ccccccccccCCCCCCCCCCCCcccCCCCCccCCccccccccChhhhcchhHHHHHHHHHHhhccC Q lcl|Aclame:pro 396 NSA-LQPLGATPDGAVEGEEAPAPKRPASTPVASLDQSPPASVPGLSPTNSDRSTDSGKTEPRRLMQKPP 464 (518) Q Consensus 396 ~~n-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~ 464 (518) -.. ....... ......+ +....+...++.+++...+..+...++ ++. +. T Consensus 450 E~~~~~~~~~~----~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~-------~~ 499 (499) T protein:vir:10 450 QDAETIKKNQE----ALRGQDP---DRLELEDKQDDSSENDKEAGSNHNQSH------RTR-------AV 499 (499) T ss_pred HHHHHHHHHHh----hhccCCC---CCCCCCCCCcccCCCCCCCccccccCC------CCC-------CC Confidence 000 0000000 0000000 000000111111111111111111111 110 00 No 210 >protein:vir:96839 Length: 474 # NCBI annotation: ORF008 # Family: family:all:125 # MgeID: mge:1642 # MgeName: EW # Cross-refs: genbank:acc:YP_240152;genbank:gi:66395815;genbank:GeneID:5133180 Probab=97.54 E-value=4.8e-05 Score=44.28 Aligned_cols=380 Identities=12% Similarity=0.050 Sum_probs=165.4 Q ss_pred CCCCCCCCCccccccccchhhhhhhccCccC---Cccc----CccchhhHHHHhhhHHHHHHHHHHHHhhccCceEEEEe Q lcl|Aclame:pro 1 MLLANGQTLSAPAMAELSPQMQDSYYYAPAV---GMQL----ERQFSLYGGIYKNQPWVRTVIAKRAQALARLPVKCMFT 73 (518) Q Consensus 1 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~----~~~~~~~~~~~~~~~~v~~~v~~ia~~ia~lp~~v~~~ 73 (518) -+..+ .....+.. ..+...+.+-... .... ..... ....-..++....+|+..+..+-+-|..+-.. T Consensus 33 ~~i~~-~~~~~~~~----~~~~~Yy~g~~~i~~~~~~~~~~~~~~~~-~~~~ki~~n~~~~Ivd~~~~~l~g~p~~~~~~ 106 (474) T protein:vir:96 33 RLIND-HKPKIDDI----TVGERYYNHDPDVLRLAPKLDNKGEIDPL-KPDWRMFTNYHQNLVDQKVAYAVANPVTFSSD 106 (474) T ss_pred HHHHH-HHHHHHHH----HHHHHHhccCCcchhccchhccccccccc-ccchhcccchHHHHHHhhhhhhcccCceeecC Confidence 00000 00000000 0000000000000 0000 00000 00000123566778888888888888776322 Q ss_pred cCCceeeecchHHHHHhhccCccCCHHHHHHHHHHHHHHcCCeeEEeeeCCCCceeeeeeeCCcceEEEeccC-cceEEE Q lcl|Aclame:pro 74 SGDTETEEHDTGYAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQKNKSGTPEKLMPMHPSRVAIKRNSR-TGRYEY 152 (518) Q Consensus 74 ~~~~~~~~~~~~~~~l~~~PN~~~t~~~f~~~~~~~~ll~G~~~~~i~~~~~G~~~~l~~l~p~~v~~~~~~~-~~~~~~ 152 (518) ++ .....+..++. | ........+..+++.+|.+|..+..+.+|++ .+..++|..+.++++.. .+...+ T Consensus 107 d~-----~~~~~l~~~~~--n---~~~~~~~~~~~~~~~~G~~~~~~y~d~~~~~-~i~~~~p~~~~~v~d~~~~~~~~~ 175 (474) T protein:vir:96 107 DD-----KSLKTIQEVLN--H---KWDDKLVDILTAASNKGIEWLQPYIDENGEF-KTFRVPAEQAIPIWTNKERDTLKA 175 (474) T ss_pred ch-----HHHHHHHHHHh--c---CHHHHHHHHHHHHHhcCeeEEEEEecCCCce-EEEEEcccceEEEEcCCCCCceEE Confidence 11 11222333332 2 2344445567888999999998888888875 47888999998887642 111111 Q ss_pred ---EeeccCCCC-------------------------------------ceeEEEeeeeeEEeecCCCCcccccchHHHH Q lcl|Aclame:pro 153 ---YFQAGAGVG-------------------------------------TQLVSFADDEVVPIRFFNPDGLERGLSLMES 192 (518) Q Consensus 153 ---~~~~~~~~~-------------------------------------~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~ 192 (518) .|...+... .....+..-.|+||+++ ..|.|-+.. T Consensus 176 ~vr~~~~~~~~~~~~yt~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iPvv~~~nn-----~~g~sd~e~ 250 (474) T protein:vir:96 176 FIRYYRLDGAERVEYWTDSDVTYYEYQDGILIPDYYHGEEHIQSHYYVGNKRVSWGRVPFIPFKNN-----PQEMSDLFM 250 (474) T ss_pred EEEEEeecCceEEEEEeCCeEEEEEecCCceeeccccccccccccccccccccCCCceeEEEeccC-----CCCCCcHHH Confidence 111100000 00011112223444432 247888888 Q ss_pred HHHHHHHHHHHHHHHHHHHHccCCcceeeeeCCcCCHHHHHHHHHHHHHHhcCccccccceecc-CCcccccccCChhhH Q lcl|Aclame:pro 193 LKSTIFSEDSSRNATAAMWKNAGRPNLVLRHEKRLSPEAQQRLREQFDRAHAGSSNTGKTMVVE-EGMEPIPLQLTAVEM 271 (518) Q Consensus 193 ~~~~i~~~~~~~~~~~~~~~ng~~p~gil~~~~~~~~e~~~~~~~~~~~~~~g~~n~g~~~vl~-~g~~~~~~~~~~~d~ 271 (518) ....++....+.....+.++..+.|-.+++--...+ ... +.... ..++++.++ +|.+++.++...... T Consensus 251 v~~liDa~d~~~S~~~~~~~~~~~~~lv~~g~~~~~---~~~----~~~~~----~~~~~i~~~~~~~~~~~l~~~~~~~ 319 (474) T protein:vir:96 251 YKTIIDAMDKRLSDTQNTFDESTELIYILKGYEGQD---LDE----FMRNL----KYYKAINVDGDGSGVDTIQIEVPVQ 319 (474) T ss_pred HHHHHHHHHHHHHHHHHHHHHhccceeeeecCCccc---ccc----hhhhh----hcCceEEecCCCCceeEEeecCChH Confidence 887787777776667777777777766654322211 111 11111 123455554 455555555544555 Q ss_pred HHHHHHHHHHHHHHHHhccchHhhccccccccccHHHH-------------HHHHHHHHHHHHHHHHHHHHHhhhcchhh Q lcl|Aclame:pro 272 QFIEARQLNREEVCGVYDIAPPIVHILDRATFSNISAQ-------------MRAFYRDTMAIPIARIQSAMDKYVGQYWV 338 (518) Q Consensus 272 q~~e~~~~~~~~Ia~~fgVpp~~lg~~~~~~~s~~e~~-------------~~~~~~~~l~P~~~~ie~~ln~~l~~~~~ 338 (518) .+.+..+...+.|+..-++|..-.+..+ ++- +..+. ...++...|.-.++.|...+ .... T Consensus 320 ~~~~~~~~l~~~i~~~s~~p~~~~~~~~-~n~-Sg~Al~~~~~~l~~k~~~k~~~~~~~l~~~~~~i~~~~-----~~~~ 392 (474) T protein:vir:96 320 SSKEYLDMLRDYVIEFGQGVDFQQDKFG-NSP-SGIALKFMYSNLDLKANKLKNKTLTALQELLQYIIDFY-----KLNI 392 (474) T ss_pred HHHHHHHHHHHHHHHHhCCccccccccc-ccc-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----CCCc Confidence 6677788888999999999864432211 111 11111 11222222222222222111 1111 Q ss_pred ccceeeechhhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHHhCCCCCCccCceeeecccccccccccccCCCCCCCCCC Q lcl|Aclame:pro 339 RKNRMKFDIDDVIQPDWEAKSESTQKMVNSGVATPNEGREIMGLPRSDDPKADELYANSALQPLGATPDGAVEGEEAPAP 418 (518) Q Consensus 339 ~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~T~NE~R~~~g~~pi~~~~gD~~~~~~n~~~~~~~~~~~~~~~~~~~~ 418 (518) ....+.+.+..-+..|..+.++ .+..+|+++...+++.++. ++++.. ++ .-+.... ....+..+.. T Consensus 393 ~~~~i~i~f~~~~p~~~~e~~~---~~~~ag~iS~et~~~~~~~--v~d~~~-E~------~ri~~E~--~e~~~~~~~~ 458 (474) T protein:vir:96 393 KVQDVEITFNFNVMVNELEQSQ---IGVQSQYLSKETVVTNHPW--VDDPVA-EL------ERIEQDN--IDFNKQLPPL 458 (474) T ss_pred ccceeeEEeccCCCcCHHHHHH---HHHhcCCCchHHHHHhCCC--CCCHHH-HH------HHHHHHH--HHHHhccccc Confidence 1123344444555666655554 4566899999888888643 333211 10 0000000 0000000000 Q ss_pred CCcccCCCCCccCCccc Q lcl|Aclame:pro 419 KRPASTPVASLDQSPPA 435 (518) Q Consensus 419 ~~~~~~~~~~~~~~~~~ 435 (518) .........++++.++ T Consensus 459 -~~~~~~~~~d~~~e~~ 474 (474) T protein:vir:96 459 -EGDANGRAQDNESETN 474 (474) T ss_pred -ccccccccCCCcccCC Confidence 0000000011111111 No 211 >protein:vir:105461 Length: 470 # NCBI annotation: putative phage portal protein # Family: family:all:125 # MgeID: mge:1502 # MgeName: KC5a # Cross-refs: genbank:acc:YP_529871;genbank:gi:90592611;genbank:GeneID:3974525 Probab=97.53 E-value=4.9e-05 Score=44.19 Aligned_cols=373 Identities=10% Similarity=0.032 Sum_probs=166.3 Q ss_pred CCCCCCCCCccccccccchhhhhhhccCccCCcccCccchhhHHHHhhhHHHHHHHHHHHHhhccCceEEEEecCCceee Q lcl|Aclame:pro 1 MLLANGQTLSAPAMAELSPQMQDSYYYAPAVGMQLERQFSLYGGIYKNQPWVRTVIAKRAQALARLPVKCMFTSGDTETE 80 (518) Q Consensus 1 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~v~~ia~~ia~lp~~v~~~~~~~~~~ 80 (518) ..-| +...-... ..... ..+.........++ .-..+......|+..+.-+-+-|..+...++. T Consensus 30 Yy~g-~~~I~~~~---~~~~~---~~~~~~~~~~~~~~------~ki~~n~~k~Iv~~~~~yl~G~p~~~~~~d~~---- 92 (470) T protein:vir:10 30 YYEN-KTDITTRN---NGKAK---LNKEGKKDPLRSAD------NRIPSNFYQLLVDQEAGYVASVFPDIDVGKDA---- 92 (470) T ss_pred Hhcc-ccchhccc---cchhc---ccccccccccccCC------cccccchHHHHHHhhhhheeccceeeecCchH---- Confidence 1112 11100000 00000 00000000000000 00123455667788888888888776432211 Q ss_pred ecchHHHHHhhccCccCCHHHHHHHHHHHHHHcCCeeEEeeeCCCCceeeeeeeCCcceEEEeccCc-ceEEE---Eeec Q lcl|Aclame:pro 81 EHDTGYAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQKNKSGTPEKLMPMHPSRVAIKRNSRT-GRYEY---YFQA 156 (518) Q Consensus 81 ~~~~~~~~l~~~PN~~~t~~~f~~~~~~~~ll~G~~~~~i~~~~~G~~~~l~~l~p~~v~~~~~~~~-~~~~~---~~~~ 156 (518) ....+..++. .+...-...+..+++.+|.+|.++..+.+|.+ .+..++|..+.++++... +.+.+ .|.. T Consensus 93 -~~~~l~~~~~-----~~~~~~~~~l~~~~~~~G~a~~~~y~d~~~~~-~~~~~~p~~~~~v~d~~~~~~~~a~ir~y~~ 165 (470) T protein:vir:10 93 -DNKKIIDVLG-----DDRALTLNGLLVDSSNAGRAWLHYWIDEDGNF-RYGIIQPDQITPIYATTLDNKLLGILRSYKQ 165 (470) T ss_pred -HHHHHHHHHh-----hhHHHHHHHHHHHHhhcCeeEEEEEecCCCce-EEEEEcccceEEEEcCCCCCceEEEEEEEEe Confidence 1112222332 12334445677888999999999988888865 567788888888876432 11111 1111 Q ss_pred cCCCCceeE----EEeee---------------------------------------------eeEEeecCCCCcccccc Q lcl|Aclame:pro 157 GAGVGTQLV----SFADD---------------------------------------------EVVPIRFFNPDGLERGL 187 (518) Q Consensus 157 ~~~~~~~~~----~~~~~---------------------------------------------~vih~~~~~~~~~~~G~ 187 (518) ....+...+ .+... .|+||+++ .+|. T Consensus 166 ~~~~~~~~~~~~e~yt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~vPvv~~~nn-----~~g~ 240 (470) T protein:vir:10 166 LDPDSGKYFTVHEYWTDKEAQFFRTNATDSTVIEPYNIITSYDLSAGYETGQSNTLKHNFGRVPFIEFSKN-----KYRL 240 (470) T ss_pred eecCCceEEEEEEEEcCCcEEEEEeecCcceeccccccccccccccccccccccccccCCCeeeEEEeecC-----CCCC Confidence 111111110 11112 23444432 2577 Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHccCCcceeeeeCCcCCHHHHHHHHHHHHHHhcCccccccceecc-----CCcccc Q lcl|Aclame:pro 188 SLMESLKSTIFSEDSSRNATAAMWKNAGRPNLVLRHEKRLSPEAQQRLREQFDRAHAGSSNTGKTMVVE-----EGMEPI 262 (518) Q Consensus 188 s~~~~~~~~i~~~~~~~~~~~~~~~ng~~p~gil~~~~~~~~e~~~~~~~~~~~~~~g~~n~g~~~vl~-----~g~~~~ 262 (518) |-+......++....+..-..+.++..+.|-.+++--...+.++ +...+.. .+.+.++ .+.+++ T Consensus 241 sd~e~v~~liDa~d~~~S~~~~~~~~~~~~~lvl~g~~~~~~~~---~~~~~~~--------~~~i~~~~~~~~~~~~~~ 309 (470) T protein:vir:10 241 PELNKYKGLIDAYDDIYNGFINDLDDVQTVILVLTNYGGADLHQ---FMNDLRK--------YKSIKINNTGNGDNSGVD 309 (470) T ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHhcCcceeeecCCccccch---hhhhhhh--------cCeEeccCCCCCcCceeE Confidence 88888887787777666666777777777776665432222111 1222211 1223332 122333 Q ss_pred cccCChhhHHHHHHHHHHHHHHHHHhccchHhhccccccccccHH----------HHHHHHHHHHHHHHHHHHHHHHHhh Q lcl|Aclame:pro 263 PLQLTAVEMQFIEARQLNREEVCGVYDIAPPIVHILDRATFSNIS----------AQMRAFYRDTMAIPIARIQSAMDKY 332 (518) Q Consensus 263 ~~~~~~~d~q~~e~~~~~~~~Ia~~fgVpp~~lg~~~~~~~s~~e----------~~~~~~~~~~l~P~~~~ie~~ln~~ 332 (518) .++.......+....+...+.|...-++|..-....++.+..... ......+..+|+-.++.|...++. T Consensus 310 ~lt~~~~~~~~~~~~~~L~~~I~~~s~~p~~~~~~~gn~Sg~Alk~~~~~l~~k~~~~~~~~~~~l~~~~~~i~~~l~~- 388 (470) T protein:vir:10 310 KLQIDIPVEARDDALKITRKNIFLFGQGIDPANFESSNASGVAIKMLYSHLELKAAKTQTYFEHAINELVRAIMRYLNF- 388 (470) T ss_pred EEeecCChHHHHHHHHHHHHHHHHHhCCCCCCccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc- Confidence 333333344456667777888888888875322111111111110 112233333333333333322221 Q ss_pred hcchhhccceeeechhhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHHhCCCCCCccCceeeecccccccccccccCCCC Q lcl|Aclame:pro 333 VGQYWVRKNRMKFDIDDVIQPDWEAKSESTQKMVNSGVATPNEGREIMGLPRSDDPKADELYANSALQPLGATPDGAVEG 412 (518) Q Consensus 333 l~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~T~NE~R~~~g~~pi~~~~gD~~~~~~n~~~~~~~~~~~~~~ 412 (518) .......+.+.+...+..|..+.++.+.++ .|+++..-+++.+++ ++++.. + +.......... T Consensus 389 ---~~~d~~~i~i~f~~~~p~d~~e~~~~~~~~--~g~iS~et~l~~~p~--v~D~~~-E---------~eri~~E~~e~ 451 (470) T protein:vir:10 389 ---SDADKRHISQHWTRTKVEDSLTKAQIVSTV--ANYSSKEAVAKANPI--VDDWQQ-E---------LKDLAKDKEEN 451 (470) T ss_pred ---cCcccceeeEEeccCCCCCHHHHHHHHHHH--hccCcHHHHHHhCCC--CCCHHH-H---------HHHHHHHHHHH Confidence 111233556666778888999999998887 578888778777643 333211 1 11100000000 Q ss_pred CCCCCCCCcccCCCCCccCCc Q lcl|Aclame:pro 413 EEAPAPKRPASTPVASLDQSP 433 (518) Q Consensus 413 ~~~~~~~~~~~~~~~~~~~~~ 433 (518) .+..++.......+.+++. T Consensus 452 --~~~~~~~~~~~~~~~dde~ 470 (470) T protein:vir:10 452 --DPYSNQADELNGKGVNDEQ 470 (470) T ss_pred --HHhhccccccCCCCCCCCC Confidence 0000000000000000000 No 212 >protein:vir:105292 Length: 478 # NCBI annotation: putative phage portal protein # Family: family:all:125 # MgeID: mge:1679 # MgeName: PH15 # Cross-refs: genbank:acc:YP_950666;genbank:gi:119967836;genbank:GeneID:4643171 Probab=97.52 E-value=5.2e-05 Score=44.07 Aligned_cols=373 Identities=8% Similarity=0.019 Sum_probs=162.1 Q ss_pred CCCCCCCCCccccccccchhhhhhhccCccCCcccCccchhhHHHHhhhHHHHHHHHHHHHhhccCceEEEEecCCceee Q lcl|Aclame:pro 1 MLLANGQTLSAPAMAELSPQMQDSYYYAPAVGMQLERQFSLYGGIYKNQPWVRTVIAKRAQALARLPVKCMFTSGDTETE 80 (518) Q Consensus 1 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~v~~ia~~ia~lp~~v~~~~~~~~~~ 80 (518) ..+-.++...... ..... . +.. ....+ ..-..++....+|+..+.-+-+-|+.+...++. T Consensus 50 ~yY~g~~~i~~~~--~~~~~------~----~~~-~~~~~---~~ki~~n~~~~ivd~~~~~l~g~~~~~~~~~d~---- 109 (478) T protein:vir:10 50 RYYNHHPDILDAP--PKRDV------N----GDY-DETKP---DWRMYTNYHQNLVDQKVAYAVANPVTFGVDNDK---- 109 (478) T ss_pred HHhcCCCchhccc--ccccc------c----ccc-ccccc---cceeccchHHHHHHHHHhhhccCCeeeecCChH---- Confidence 1111111000000 00000 0 000 00000 000123456678888888887888776322111 Q ss_pred ecchHHHHHhhccCccCCHHHHHHHHHHHHHHcCCeeEEeeeCCCCceeeeeeeCCcceEEEeccC-cceEEEE---eec Q lcl|Aclame:pro 81 EHDTGYAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQKNKSGTPEKLMPMHPSRVAIKRNSR-TGRYEYY---FQA 156 (518) Q Consensus 81 ~~~~~~~~l~~~PN~~~t~~~f~~~~~~~~ll~G~~~~~i~~~~~G~~~~l~~l~p~~v~~~~~~~-~~~~~~~---~~~ 156 (518) ....+..++. | ........++.+++.+|.+|+.+..+.+|.+ .+..++|..+.++++.. .+...+. |.. T Consensus 110 -~~~~l~~~~~--n---~~~~~~~~~~~~~~~~G~~~~~~~~d~~g~~-~~~~~~p~~~~~i~d~~~~~~~~~~v~~~~~ 182 (478) T protein:vir:10 110 -ALKQIQHTLN--H---KWDDKLVDILTAASNKGIEWVQPYVDEEGEF-KTFRVPAEQAVPIWTNKERDELQAFIRVYEL 182 (478) T ss_pred -HHHHHHHHHh--c---CHHHHHHHHHHHHHhcCeEEEEEEecCCCee-EEEEEcccceEEEEcCCCCCceEEEEEEEEe Confidence 1122233332 2 3455666678899999999999888888875 47778888888887642 2211111 111 Q ss_pred cCCC-------------------------------------CceeEEEeeeeeEEeecCCCCcccccchHHHHHHHHHHH Q lcl|Aclame:pro 157 GAGV-------------------------------------GTQLVSFADDEVVPIRFFNPDGLERGLSLMESLKSTIFS 199 (518) Q Consensus 157 ~~~~-------------------------------------~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~i~~ 199 (518) .+.. ......+..-.|+||++. .+|.|-+......++. T Consensus 183 ~~~~~~~~y~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vPvv~~~n~-----~~g~sd~~~v~~liDa 257 (478) T protein:vir:10 183 DGAERVEYWTKDDVTYYELKEGQLIPDFYRSDDHIQPHYYQGNKLMSWGRVPFIPFKNN-----PQEVSDLFMYKTIIDA 257 (478) T ss_pred cCceEEEEEeCCeEEEEEEcCCeeeccccccccccccceecccccccCCccceEEeccC-----CCCCCcHHHHHHHHHH Confidence 0000 000011111223444332 3578878777777777 Q ss_pred HHHHHHHHHHHHHccCCcceeeeeCCcCCHHHHHHHHHHHHHHhcCccccccceecc--CCcccccccCChhhHHHHHHH Q lcl|Aclame:pro 200 EDSSRNATAAMWKNAGRPNLVLRHEKRLSPEAQQRLREQFDRAHAGSSNTGKTMVVE--EGMEPIPLQLTAVEMQFIEAR 277 (518) Q Consensus 200 ~~~~~~~~~~~~~ng~~p~gil~~~~~~~~e~~~~~~~~~~~~~~g~~n~g~~~vl~--~g~~~~~~~~~~~d~q~~e~~ 277 (518) ...+.....+.++..+.|-.+++--...... ....... .++++.+. +|.++..+........+.... T Consensus 258 ~~~~~S~~~~~~~~~~~p~~~~~g~~~~~~~---~~~~~~~--------~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 326 (478) T protein:vir:10 258 LDKRLSDTQNTFDESVELIYILKGYEGEDMK---DFMHNLK--------YYKAISVAGESGSGVDTIKVEVPIDSVKEYT 326 (478) T ss_pred HHHHHHHHHHHHHHhhCceeeeecCCccccc---hhhhhhh--------hcceEEecCCCCCcceEEeecCChHHHHHHH Confidence 7766666666666667776555432221111 1111111 12233332 334444344333455566777 Q ss_pred HHHHHHHHHHhccchHhhccccccccccHHHH-------------HHHHHHHHHHHHHHHHHHHHHhhhcchhhccceee Q lcl|Aclame:pro 278 QLNREEVCGVYDIAPPIVHILDRATFSNISAQ-------------MRAFYRDTMAIPIARIQSAMDKYVGQYWVRKNRMK 344 (518) Q Consensus 278 ~~~~~~Ia~~fgVpp~~lg~~~~~~~s~~e~~-------------~~~~~~~~l~P~~~~ie~~ln~~l~~~~~~~~~~~ 344 (518) +...+.|...-++|..-.+... ++- +..+. ....+..+++-.++.|... + ........++ T Consensus 327 ~~l~~~i~~~s~~p~~~~~~~~-~n~-Sg~Al~~~~~~l~~k~~~~~~~~~~~l~~~~~li~~~----~-g~~~~~~~i~ 399 (478) T protein:vir:10 327 KMLRDYIIEFGQGVDFQQDKFG-NSP-SGIALKFMYSNLDLKANKLKNKTLTALQELLQYIIDF----Y-RLDVKVQDIE 399 (478) T ss_pred HHHHHHHHHHhCccccCccccc-ccc-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----h-CCCcccccce Confidence 7788888888888754332211 111 11111 1122222222222222111 1 1111112334 Q ss_pred echhhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHHhCCCCCCccCceeeecccccccccccccCCCCCCCCCCCCcccC Q lcl|Aclame:pro 345 FDIDDVIQPDWEAKSESTQKMVNSGVATPNEGREIMGLPRSDDPKADELYANSALQPLGATPDGAVEGEEAPAPKRPAST 424 (518) Q Consensus 345 fd~~~l~~~d~~~~~~~~~~~~~~g~~T~NE~R~~~g~~pi~~~~gD~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~ 424 (518) +.+..-+..|..+.++.+.++ .|+++..-+++.+++- +++....- .+... .....+......+ ... T Consensus 400 i~f~~~~p~d~~e~a~~~~kl--~g~iS~et~~~~l~~v--~D~~~E~~-------ri~~E--~~~~~~~~~~~~~-~~~ 465 (478) T protein:vir:10 400 ITFNFNVMVNELENSQIAMNS--TGLLSKETILSNHAWV--EDPVAEME-------RIEQE--NIELNQQLPDIEE-GLN 465 (478) T ss_pred EEecCCCCCCHHHHHHHHHHH--hCCCChHHHHHhCCCC--CCHHHHHH-------HHHHH--HHHHHhhcccccc-ccC Confidence 445566777888889988887 6889988888888653 22211100 00000 0000000000000 000 Q ss_pred CCCCccCCccccc Q lcl|Aclame:pro 425 PVASLDQSPPASV 437 (518) Q Consensus 425 ~~~~~~~~~~~~~ 437 (518) ...+.+++.+++. T Consensus 466 ~~~~~~~~~~~~~ 478 (478) T protein:vir:10 466 GEQQRQSENNQPE 478 (478) T ss_pred CCCCCCCCCCCCC Confidence 0000000000000 No 213 >protein:vir:78083 Length: 537 # NCBI annotation: gp3 # Family: family:all:125 # MgeID: mge:1844 # MgeName: P35 # Cross-refs: genbank:acc:YP_001468787;genbank:gi:157325368;genbank:GeneID:5601845 Probab=97.47 E-value=6.1e-05 Score=43.70 Aligned_cols=418 Identities=11% Similarity=0.016 Sum_probs=167.6 Q ss_pred CCCCC----CC-CCccccccccchhhhhhhccC-----------ccCCcccCccchhhHHHHhhhHHHHHHHHHHHHhhc Q lcl|Aclame:pro 1 MLLAN----GQ-TLSAPAMAELSPQMQDSYYYA-----------PAVGMQLERQFSLYGGIYKNQPWVRTVIAKRAQALA 64 (518) Q Consensus 1 ~~f~~----~~-~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~v~~~v~~ia~~ia 64 (518) -+|.. .. +...+.. -.+..-+-+- ...+........ ...-..+....-.|+..+.-+- T Consensus 15 ~~~~~~i~~~~~~~~~~~~----~~~~~YY~g~h~Il~r~~~~~~~~~~~~~d~~~--~nnki~~nf~k~Ivd~~~~yl~ 88 (537) T protein:vir:78 15 GLLNTEITTYMASNHIKWA----HIGENYYNQENDIEKSRIFYMNDKGQLREDNYA--SNVKISHGFFTELVDQLAQYLL 88 (537) T ss_pred HHHHHHHHHHHHHHHHHHH----HHHHHHhcccchhhhcccccccccccccccccc--cccccccchHHHHHHHHhhhhc Confidence 00000 00 0000000 0000000000 000000000000 0000123345567777777777 Q ss_pred cCceEEEEecCCceeeecchHHHHHhhccCccCCHHHHHHHHHHHHHHcCCeeEEeeeCCCCceeeeeeeCCcceEEEec Q lcl|Aclame:pro 65 RLPVKCMFTSGDTETEEHDTGYAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQKNKSGTPEKLMPMHPSRVAIKRN 144 (518) Q Consensus 65 ~lp~~v~~~~~~~~~~~~~~~~~~l~~~PN~~~t~~~f~~~~~~~~ll~G~~~~~i~~~~~G~~~~l~~l~p~~v~~~~~ 144 (518) +-|..+--.+++ ...+...+..-+. .........+..++..+|.+|.++..+.+|.+ .+..++|..+-++++ T Consensus 89 G~Pv~~~~~d~~------~~e~~~~l~~~~~-~~~~~~~~el~~~~s~~G~ay~~~y~de~~~~-~~~~i~p~~~~pv~d 160 (537) T protein:vir:78 89 SNGVEVKVKDED------NTQLDEILQEYFD-EDFQATIDTLVTNASKKGFEGIFARTTSEGKL-KFQTVDGLTLIPVFD 160 (537) T ss_pred ccCceeecCcch------hHHHHHHHHHHhh-ccHHHHHHHHHHHHhhcCeeEEEeeecCCCce-EEEEEccceeEEEEc Confidence 888877432211 1111222222221 22334455677888999999999988888865 467788888888776 Q ss_pred cCcceE----EEEeeccC--CCCc----eeEEEeeeeeEEeecCC----------------------------------- Q lcl|Aclame:pro 145 SRTGRY----EYYFQAGA--GVGT----QLVSFADDEVVPIRFFN----------------------------------- 179 (518) Q Consensus 145 ~~~~~~----~~~~~~~~--~~~~----~~~~~~~~~vih~~~~~----------------------------------- 179 (518) ..+... .|...... ...+ ....+.+..|.+++... T Consensus 161 ~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~evyt~~~i~~y~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 240 (537) T protein:vir:78 161 DYGVLKMIIRWYSEIRYSTKQQSTETIWHADVWNEEAVCYYIQDDEGVSTTYKLDEAYNPNPAPHVLAIEESTDADFEDT 240 (537) T ss_pred CCCCceeEEEEEeeeeccccccCcceEEEEEEEcCCcEEEEEecCCcccccccccccccccccceeeecccccccccccc Confidence 543211 11100000 0000 00112223333322100 Q ss_pred --------C---------CcccccchHHHHHHHHHHHHHHHHHHHHHHHHccCCcceeeeeCCcCCHHHHHHHHHHHHHH Q lcl|Aclame:pro 180 --------P---------DGLERGLSLMESLKSTIFSEDSSRNATAAMWKNAGRPNLVLRHEKRLSPEAQQRLREQFDRA 242 (518) Q Consensus 180 --------~---------~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~p~gil~~~~~~~~e~~~~~~~~~~~~ 242 (518) + .+..+|.|-+......++....+....++.+...+.|-.++.--...+.+ .++..+.. T Consensus 241 ~~~~~~~~~~g~iPvv~f~nn~~~~sd~e~v~~LiDayd~~~S~~an~~~~~~~~ilvi~g~~~~~~~---~~~~~l~~- 316 (537) T protein:vir:78 241 DGYQVLGRSYSKFPFQLLYNNKDGMSDVKRVKSIIDDYDVMNCFLSNNLQDFSEAIYVVKGFSGDSTD---KLRQNIKA- 316 (537) T ss_pred ccccccccCCcceeEEEeccCccCCCchhhhHHHHHHHHHHHHhhhhHHHHhcCceeeeecCCCccch---hHHHHHhh- Confidence 0 01125778888888888777777776777777666665555432221111 12222211 Q ss_pred hcCccccccceeccCCcccccccCChhhHHHHHHHHHHHHHHHHHhccchHhhccccccccccH------------HHHH Q lcl|Aclame:pro 243 HAGSSNTGKTMVVEEGMEPIPLQLTAVEMQFIEARQLNREEVCGVYDIAPPIVHILDRATFSNI------------SAQM 310 (518) Q Consensus 243 ~~g~~n~g~~~vl~~g~~~~~~~~~~~d~q~~e~~~~~~~~Ia~~fgVpp~~lg~~~~~~~s~~------------e~~~ 310 (518) .+.+.+-+++.++..+............++...+.|...-.+|- ......++-|+. .... T Consensus 317 ------~~~i~v~~d~~~v~~l~~~~~~~~~e~~ld~L~~~I~~~s~~~~--~~~~~~gn~SGvAlk~~~~~l~~ka~~k 388 (537) T protein:vir:78 317 ------KKMIGVNGDNAGMEIQTVSIPYEARKAKMDIDVENIYRSGMGFN--STAVGDGNVTNVVIKSRYTLLAMKARKM 388 (537) T ss_pred ------cCceeecCCCCceeEEEecCCHHHHHHHHHHHHHHHHHhcCCCC--CccccccCCcHHHHHHHHhhHHHHHHHH Confidence 12222333333333333333333334445555666655443332 111111121211 1122 Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhcchhhccceeeechhhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHHhCCCCCCccC Q lcl|Aclame:pro 311 RAFYRDTMAIPIARIQSAMDKYVGQYWVRKNRMKFDIDDVIQPDWEAKSESTQKMVNSGVATPNEGREIMGLPRSDDPKA 390 (518) Q Consensus 311 ~~~~~~~l~P~~~~ie~~ln~~l~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~T~NE~R~~~g~~pi~~~~g 390 (518) ..++..+|+-.++.|...++.+-... .....+.|.+..-+..|..+.++.+.+++..|+++..-+.+.+++ ++++.- T Consensus 389 e~~f~~~l~~~~~~i~~~~~~~~~~~-~d~~~i~i~f~~~~P~n~~e~a~~~~~l~~~giiS~eT~l~~~p~--vdd~e~ 465 (537) T protein:vir:78 389 ETSLRKVLRWCADMVVSDIALRGLGE-YDSNDICFEIEPHVLANELDIATTRKTEAETEALKIGNIMTVAPR--IGDDET 465 (537) T ss_pred HHHHHHHHHHHHHHHHHHHhhcCCcc-cccceeeEEeccCCCCCHHHHHHHHHHHHhcCcchHHHHHHhCCC--CCCHHH Confidence 33344444444444444443221111 122345666667788899999999999999999998888877643 333211 Q ss_pred ceeeec------ccccc-cccc--cccC------CCCCCCCCCCCcccCCCCCccCCccccccccChhhhcc Q lcl|Aclame:pro 391 DELYAN------SALQP-LGAT--PDGA------VEGEEAPAPKRPASTPVASLDQSPPASVPGLSPTNSDR 447 (518) Q Consensus 391 D~~~~~------~n~~~-~~~~--~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 447 (518) .+..-- .+... +... .... ...+.....+++..-+..+...+|+...+.+..+.-.. T Consensus 466 ek~~~ee~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 537 (537) T protein:vir:78 466 LKLIAEELDLDYNELKDALAEQDAQSLDVSPDVQAMLDGLPVNANQPPVDPNQPVADPNVVPPTDPNAVPQT 537 (537) T ss_pred HHHHHHHHHhhhhhhhhhhhhhcccccCcCcchhhhcCCCCCCCCCCCCCccCCCCCCCCCCCCCCccCCCC Confidence 000000 00000 0000 0000 00000000000000000111111122222222111110 No 214 >protein:vir:96179 Length: 468 # NCBI annotation: ORF007 # Family: family:all:125 # MgeID: mge:1602 # MgeName: 37 # Cross-refs: genbank:acc:YP_240075;genbank:gi:66395736;genbank:GeneID:5133166 Probab=97.40 E-value=7.5e-05 Score=43.21 Aligned_cols=379 Identities=10% Similarity=0.032 Sum_probs=154.2 Q ss_pred CCCCCCCCCccccccccc--------------hhhhhhhccCccCC-ccc---Cccc----hhh-HHHHhhhHHHHHHHH Q lcl|Aclame:pro 1 MLLANGQTLSAPAMAELS--------------PQMQDSYYYAPAVG-MQL---ERQF----SLY-GGIYKNQPWVRTVIA 57 (518) Q Consensus 1 ~~f~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~-~~~---~~~~----~~~-~~~~~~~~~v~~~v~ 57 (518) -.|-+-.....+...... +.+.....+..+.. ... .... ... ...-...+....+|+ T Consensus 11 ~~~~~~~~~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~yY~g~~~i~~~~~~~~~~~~~~~~~~~~ki~~n~~~~Iv~ 90 (468) T protein:vir:96 11 PYHERVVEQIKPQYETQEEMILRLITKHKENVEDITVGERYYNHQPDVLFNAPKRNVKGEIDPFKPDWRMYTNYHQNLVD 90 (468) T ss_pred eeehheeecccccccCcHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccccccccccccccccchHHHHHH Confidence 011111111100000000 11110000000000 000 0000 000 000012445566677 Q ss_pred HHHHhhccCceEEEEecCCceeeecchHHHHHhhccCccCCHHHHHHHHHHHHHHcCCeeEEeeeCCCCceeeeeeeCCc Q lcl|Aclame:pro 58 KRAQALARLPVKCMFTSGDTETEEHDTGYAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQKNKSGTPEKLMPMHPS 137 (518) Q Consensus 58 ~ia~~ia~lp~~v~~~~~~~~~~~~~~~~~~l~~~PN~~~t~~~f~~~~~~~~ll~G~~~~~i~~~~~G~~~~l~~l~p~ 137 (518) ..+.-+-+-|..+--.++ .....+..++. | +.......++.+++.+|.+|..+..+.+|.+ .+..++|. T Consensus 91 ~~~~~l~g~p~~~~~~d~-----~~~~~l~~~~~--n---~~~~~~~~~~~~~~~~G~~~~~v~~d~~~~~-~i~~~~p~ 159 (468) T protein:vir:96 91 QKVAYAVANPVTYGTEDE-----KSLKTIQEVLN--H---KWDDKLVDILTAASNKGVEWIQPYVDEQGEF-KTFRVPAE 159 (468) T ss_pred HHHhhhccCCceeccCCh-----HHHHHHHHHHh--c---CHHHHHHHHHHHHhhcCeEEEEEEEcCCCce-EEEEEccc Confidence 777777666766532111 11222333332 2 3445556678899999999998888888764 57778888 Q ss_pred ceEEEeccC-cceEEEEeeccCCCC-ceeEEEeeee---------------------------------------eEEee Q lcl|Aclame:pro 138 RVAIKRNSR-TGRYEYYFQAGAGVG-TQLVSFADDE---------------------------------------VVPIR 176 (518) Q Consensus 138 ~v~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~---------------------------------------vih~~ 176 (518) .+.++++.. .+...+.+......+ .....+.... |++|+ T Consensus 160 ~~~~v~~~~~~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iPvv~~~ 239 (468) T protein:vir:96 160 QAIPIWTNKERDELKAFIRLYELDGGERVEYWTANDVTFYELKDGQLIPDYYQGEEHVQAHYYVGNKSMSWNRVPFIPFK 239 (468) T ss_pred ceEEEEcCCCCCceEEEEEEEEecCceEEEEEeCCeEEEEEEcCCceeecccccccccccceeeccccccCCcccEEEec Confidence 888776532 222111110000000 0000111112 23332 Q ss_pred cCCCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHccCCcceeeeeCCcCCHHHHHHHHHHHHHHhcCccccccceecc Q lcl|Aclame:pro 177 FFNPDGLERGLSLMESLKSTIFSEDSSRNATAAMWKNAGRPNLVLRHEKRLSPEAQQRLREQFDRAHAGSSNTGKTMVVE 256 (518) Q Consensus 177 ~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~p~gil~~~~~~~~e~~~~~~~~~~~~~~g~~n~g~~~vl~ 256 (518) . ...|.|-+..+...++....+.....+.++..+.|-.+++--.....+ .+...+ ..++++.++ T Consensus 240 n-----~~~g~sd~e~v~~liDa~d~~~S~~~~~~~~~~~p~lv~~g~~~~~~~---~~~~~~--------~~~~~i~~~ 303 (468) T protein:vir:96 240 N-----NPQEVSDLFMYKTIIDAMDKRLSDTQNTFDEATELIYVLKGYEGEDLE---EFMYNL--------KYYKAINVD 303 (468) T ss_pred C-----CCCCCCchHHHHHHHHHHHHHHHHHHHHHHHhcCceeeeecCCccccc---hhhhhh--------hcCceEEec Confidence 2 134777777777777776666666666677777776655432221111 111111 112344443 Q ss_pred --CCcccccccCChhhHHHHHHHHHHHHHHHHHhccchHhhccccccccccHHHH-------------HHHHHHHHHHHH Q lcl|Aclame:pro 257 --EGMEPIPLQLTAVEMQFIEARQLNREEVCGVYDIAPPIVHILDRATFSNISAQ-------------MRAFYRDTMAIP 321 (518) Q Consensus 257 --~g~~~~~~~~~~~d~q~~e~~~~~~~~Ia~~fgVpp~~lg~~~~~~~s~~e~~-------------~~~~~~~~l~P~ 321 (518) ++.+.+.++.......+...++...+.|...-++|....... .++ .+.++. ....+..+++-+ T Consensus 304 ~d~~~~~~~l~~~~~~~~~~~~~~~l~~~I~~~s~~p~~~~~~~-~~n-~Sg~Alk~~~~~l~~k~~~k~~~~~~~l~~~ 381 (468) T protein:vir:96 304 GDGSGGVDTIQIDVPVQSAKEYLDMLRDYVIEFGQGVDFQQDKF-GNS-PSGIALKFMYSNLDLKANKLKNKTLTALQEL 381 (468) T ss_pred CCCCCcceEEeecCChHHHHHHHHHHHHHHHHHhCccccccccc-ccc-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Confidence 333344444333445566677777888888888875332111 111 111111 111122222222 Q ss_pred HHHHHHHHHhhhcchhhccceeeechhhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHHhCCCCCCccCceeeecccccc Q lcl|Aclame:pro 322 IARIQSAMDKYVGQYWVRKNRMKFDIDDVIQPDWEAKSESTQKMVNSGVATPNEGREIMGLPRSDDPKADELYANSALQP 401 (518) Q Consensus 322 ~~~ie~~ln~~l~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~T~NE~R~~~g~~pi~~~~gD~~~~~~n~~~ 401 (518) ++.|.. .+ ........+.+.+..-+..|..+.++ .+...|+++.-.+.+.++. ++++... T Consensus 382 ~~li~~----~~-g~~~d~~~i~i~f~~~~p~d~~e~a~---~~~~~g~iS~et~i~~l~~--v~D~~~E---------- 441 (468) T protein:vir:96 382 LQYIID----FY-KLSIKVQDVEITFNFNVMVNELEQSQ---IGVNSQYLSKETVVTNHPW--VDDPVAE---------- 441 (468) T ss_pred HHHHHH----Hh-CCCcccceeeEEecCCCCcCHHHHHH---HHHhcCCCchHHHHHhCCC--CCCHHHH---------- Confidence 222211 11 11111223444444555666655554 4566799998888877643 3322111 Q ss_pred cccccccCCCCCCCCCCCCcccCCCCCccCCcc Q lcl|Aclame:pro 402 LGATPDGAVEGEEAPAPKRPASTPVASLDQSPP 434 (518) Q Consensus 402 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 434 (518) +........ .... .. ..-.+..+.+|. T Consensus 442 ~~ri~~E~~---~~~~--~~-~~~~~~~~~~~~ 468 (468) T protein:vir:96 442 MERIDQEEL---ALPS--IE-EGLNGKENNEPT 468 (468) T ss_pred HHHHHHHHH---HHHH--Hh-hccCCCCCCCCC Confidence 110000000 0000 00 000000111111 No 215 >protein:vir:107112 Length: 478 # NCBI annotation: putative phage portal protein # Family: family:all:125 # MgeID: mge:1571 # MgeName: CNPH82 # Cross-refs: genbank:acc:YP_950601;genbank:gi:119953681;genbank:GeneID:4643121 Probab=97.31 E-value=9.8e-05 Score=42.56 Aligned_cols=391 Identities=9% Similarity=0.027 Sum_probs=162.3 Q ss_pred CCCCC--CCCCccc--------cccccchhhhhhhccCccCCcccCccc---------hhhHHHHhhhHHHHHHHHHHHH Q lcl|Aclame:pro 1 MLLAN--GQTLSAP--------AMAELSPQMQDSYYYAPAVGMQLERQF---------SLYGGIYKNQPWVRTVIAKRAQ 61 (518) Q Consensus 1 ~~f~~--~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~v~~~v~~ia~ 61 (518) -+|.. ......+ ......+.+.....+..+......+.. ..-...-..++....+|+..+. T Consensus 15 ~~~~~~~~~~~~~~~~i~~~i~~~~~~~~r~~~~~~Yy~g~~~i~~~~~~~~~~~~~~~~~~~~ki~~n~~k~ivd~~~~ 94 (478) T protein:vir:10 15 QVVEQIKPKYETQEEMILRLVREHKENIDNITMGERYYNHHPDILDAPFKRDVNGDYDETKPDWRMYTNYHQNLVDQKVA 94 (478) T ss_pred HHHHHhhhccCChHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccchhhhcccccccccccceeccchHHHHHHHHhh Confidence 00000 0000000 000000001111100000000000000 0000001124567778888888 Q ss_pred hhccCceEEEEecCCceeeecchHHHHHhhccCccCCHHHHHHHHHHHHHHcCCeeEEeeeCCCCceeeeeeeCCcceEE Q lcl|Aclame:pro 62 ALARLPVKCMFTSGDTETEEHDTGYAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQKNKSGTPEKLMPMHPSRVAI 141 (518) Q Consensus 62 ~ia~lp~~v~~~~~~~~~~~~~~~~~~l~~~PN~~~t~~~f~~~~~~~~ll~G~~~~~i~~~~~G~~~~l~~l~p~~v~~ 141 (518) -+-+-|+.+...++. ....+..++. | ........+..+.+.+|.+|..+..+.+|.+ .+..++|..+.+ T Consensus 95 yl~g~p~~~~~~~~~-----~~~~l~~~~~--n---~~~~~~~~~~~~~~~~G~~~~~v~~d~~~~~-~~~~~~p~~~~~ 163 (478) T protein:vir:10 95 YAVANPVTFGVDNDK-----ALKQIQHTLN--H---KWDDKLVDILTAASNKGIEWVQPYVDEEGEF-KTFRVPAEQAVP 163 (478) T ss_pred hhcccCceeecCChH-----HHHHHHHHHh--c---cHHHHHHHHHHHHhhCCeEEEEEEecCCCce-EEEEEcccceEE Confidence 888888876322111 1112222222 2 3455666678899999999999888888765 577788988888 Q ss_pred EeccC-cceEEEEeeccCCCCceeE-EEeeee---------------------------------------eEEeecCCC Q lcl|Aclame:pro 142 KRNSR-TGRYEYYFQAGAGVGTQLV-SFADDE---------------------------------------VVPIRFFNP 180 (518) Q Consensus 142 ~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~~~---------------------------------------vih~~~~~~ 180 (518) +++.. .+.+.+.+......+...+ .+.... |++|++. T Consensus 164 v~d~~~~~~~~~~ir~~~~~~~~~~~~y~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~vPvv~~~n~-- 241 (478) T protein:vir:10 164 IWTNKERDELQAFIRVYELDGAERVEYWTKDDVTFYELKEGQLIPDFYRSEDHIQPHYYQGNKLMSWGRVPFIPFKNN-- 241 (478) T ss_pred EEcCCCCCceEEEEEEEeeeCceEEEEEeCCcEEEEEecCCeeeccccccccccccceecccccccCCcceEEEeccC-- Confidence 77532 2222111110010011111 111222 2333321 Q ss_pred CcccccchHHHHHHHHHHHHHHHHHHHHHHHHccCCcceeeeeCCcCCHHHHHHHHHHHHHHhcCccccccceec--cCC Q lcl|Aclame:pro 181 DGLERGLSLMESLKSTIFSEDSSRNATAAMWKNAGRPNLVLRHEKRLSPEAQQRLREQFDRAHAGSSNTGKTMVV--EEG 258 (518) Q Consensus 181 ~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~p~gil~~~~~~~~e~~~~~~~~~~~~~~g~~n~g~~~vl--~~g 258 (518) ..|.|.+......++....+.....+.++..+.|-.+++--.. +....+...+.. .+++.+ +.| T Consensus 242 ---~~g~sd~e~v~~liDa~~~~~S~~~~~~~~~~~~~~~~~g~~~---~~~~~~~~~~~~--------~~~~~~~~~~~ 307 (478) T protein:vir:10 242 ---PQEVSDLFMYKTIIDALDKRLSDTQNTFDESVELIYILKGYEG---EDMKDFMHNLKY--------YKAISVAGESG 307 (478) T ss_pred ---CCCCCcHHHHHHHHHHHHHHHHHHHHHHHHhhCcceeeecCCc---ccccchhhhhhh--------CceeEecCCCC Confidence 2477888777777777666655556666666666555443221 111111111111 123333 233 Q ss_pred cccccccCChhhHHHHHHHHHHHHHHHHHhccchHhhc-cccccccccHH----------HHHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 259 MEPIPLQLTAVEMQFIEARQLNREEVCGVYDIAPPIVH-ILDRATFSNIS----------AQMRAFYRDTMAIPIARIQS 327 (518) Q Consensus 259 ~~~~~~~~~~~d~q~~e~~~~~~~~Ia~~fgVpp~~lg-~~~~~~~s~~e----------~~~~~~~~~~l~P~~~~ie~ 327 (518) .++..+........+.+..+...+.|...-++|..-.+ ..++.+....+ ......+..+++-.++.|.. T Consensus 308 ~~~~~l~~~~~~~~~~~~~~~l~~~I~~~s~~p~~~~~~~~~n~Sg~Ai~~~~~~l~~k~~~~~~~~~~~l~~~~~li~~ 387 (478) T protein:vir:10 308 SGVDTIKVEVPIDSVKEYTKMLRDYIIEFGQGVDFQQDKFGNSPSGIALKFMYSNLDLKANKLKNKTLTALQELLQYIID 387 (478) T ss_pred CcceEEeecCCHHHHHHHHHHHHHHHHHHhCCcCcCccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Confidence 34444444445566777788888899999888853322 11111110000 01111222222222222211 Q ss_pred HHHhhhcchhhccceeeechhhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHHhCCCCCCccCceeeecccccccccccc Q lcl|Aclame:pro 328 AMDKYVGQYWVRKNRMKFDIDDVIQPDWEAKSESTQKMVNSGVATPNEGREIMGLPRSDDPKADELYANSALQPLGATPD 407 (518) Q Consensus 328 ~ln~~l~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~T~NE~R~~~g~~pi~~~~gD~~~~~~n~~~~~~~~~ 407 (518) .+ ........+++.+..-+..|..+.++.+.++ .|+++..-+.+.++. ++++....-.+ ..... T Consensus 388 ----~~-~~~~d~~~i~i~f~~~~p~~~~e~~~~~~~~--~g~iS~et~i~~~~~--v~d~~~E~~ri-------~~E~~ 451 (478) T protein:vir:10 388 ----FY-RLDVRVQDIEITFNFNVMVNELENSQIAMNS--TGLLSKETILGNHSW--VQDPVAEMERI-------EQENI 451 (478) T ss_pred ----Hh-CCCcccccceEEeCCCCCCCHHHHHHHHHHH--hCCCChHHHHHhCCC--CCCHHHHHHHH-------HHHHH Confidence 11 1111112344455566777888888888776 588887777776653 22221110000 00000 Q ss_pred cCCCCCCCCCCCCcccCCCCCccCCccccccccC Q lcl|Aclame:pro 408 GAVEGEEAPAPKRPASTPVASLDQSPPASVPGLS 441 (518) Q Consensus 408 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 441 (518) . ..+..+...++.+. ++.....++. .+ T Consensus 452 ~--~~~~~~~~~~~~~d---~~~~~~~d~~--~e 478 (478) T protein:vir:10 452 E--LNQQLPDIEEGLND---EQQRQSEDNQ--SE 478 (478) T ss_pred H--HHHhccccCCCCcc---cccccCcCCC--CC Confidence 0 00000000000000 0000000000 00 No 216 >protein:vir:4073 Length: 279 # NCBI annotation: minor structural protein # Family: family:all:11744 # MgeID: mge:85 # MgeName: c2 # Cross-refs: genbank:acc:NP_043552;genbank:gi:9628686;genbank:GeneID:1261159 Probab=97.13 E-value=1.2e-05 Score=47.59 Aligned_cols=274 Identities=9% Similarity=-0.025 Sum_probs=126.9 Q ss_pred hhhhccCccCCcccCccchhhHHHHhhhHHHHHHHHHHHHhhccCceEEEEecCCceeeecchHHHHHh----hccCccC Q lcl|Aclame:pro 22 QDSYYYAPAVGMQLERQFSLYGGIYKNQPWVRTVIAKRAQALARLPVKCMFTSGDTETEEHDTGYAKLL----ADPCEYL 97 (518) Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~v~~ia~~ia~lp~~v~~~~~~~~~~~~~~~~~~l~----~~PN~~~ 97 (518) ++. -.+...|++++-..|.|.. ...+-++-+|+ ---|-.. T Consensus 1 ~~~-----------------------------~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~ 44 (279) T protein:vir:40 1 MSL-----------------------------FNLSRRAEDVSFSTFTVQD-------PTTDLLLGKLLGLVSYFDNVDY 44 (279) T ss_pred Ccc-----------------------------cccchhhcccceeeeeecC-------cchhHHHHHHHHHHHHhhcccc Confidence 000 0112222333222222210 11111111121 1223333 Q ss_pred CHHHHHHHHHHHHHHcCCeeEEeeeCCCCceeeeeeeCCcceEEEeccCcceEEEEeeccCCCCceeEEEeeeeeEEeec Q lcl|Aclame:pro 98 DPFAFWEWVASTLDIYGETYLAIQKNKSGTPEKLMPMHPSRVAIKRNSRTGRYEYYFQAGAGVGTQLVSFADDEVVPIRF 177 (518) Q Consensus 98 t~~~f~~~~~~~~ll~G~~~~~i~~~~~G~~~~l~~l~p~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vih~~~ 177 (518) +-..-++.+..+. +.|.-.. .++- .|--..-..+..+...+.. .......+++|-.++..|-. T Consensus 45 ~~~~~~~~~~~~~-~~~~~~~-~~~~-~~~~~~~~~~~~d~fn~~v--------------r~~~~~~vtVP~~Dv~IieN 107 (279) T protein:vir:40 45 SEASKLEDLFYWA-LQGKEVY-RVWY-GGFKYYAQRVNADQFNIVV--------------REPNRREVTIRTNDYEMLLN 107 (279) T ss_pred hhhhhhhhhhhhh-hccceee-hhhh-hhHHHHHhhcCcchhhhhe--------------ecCCcceeEeecchhhhhhc Confidence 3333333333322 2332211 1111 1100000011111100000 01112224445444443332 Q ss_pred CCCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHccCCcceeeeeCCc-CCHHHHHHHHHHHHHHhcCccccccceecc Q lcl|Aclame:pro 178 FNPDGLERGLSLMESLKSTIFSEDSSRNATAAMWKNAGRPNLVLRHEKR-LSPEAQQRLREQFDRAHAGSSNTGKTMVVE 256 (518) Q Consensus 178 ~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~p~gil~~~~~-~~~e~~~~~~~~~~~~~~g~~n~g~~~vl~ 256 (518) +.+|.-+- ....-+++.. +. ...-+.+.+..+++++++.. ..++..++.+..++++..++++-+++.+++ T Consensus 108 -----Plv~v~~e-e~~kM~~la~--na-i~~KLD~~~qIk~fIKTd~d~glee~kekaR~rIk~mlalAk~~nGityid 178 (279) T protein:vir:40 108 -----PFYGANPQ-RFGVMFGMAS--NG-IGRRLDSQAQIKIYWKTKVSSGLKEVWDRIRERLTQQQQLAREFNGVSVIG 178 (279) T ss_pred -----chheeccc-hhhHHHHHHH--hh-hhhhhcccceeeeEEecCcchhHHHHHHHHHHHHHHHHHHHHhcCCeeeec Confidence 23444332 2222222222 22 23333777888899998865 456678888999999998888778999999 Q ss_pred CCcccccccCChhhHHHHHHHHHHHHHHHHHhccchHhhccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHhhhcch Q lcl|Aclame:pro 257 EGMEPIPLQLTAVEMQFIEARQLNREEVCGVYDIAPPIVHILDRATFSNISAQMRAFYRDTMAIPIARIQSAMDKYVGQY 336 (518) Q Consensus 257 ~g~~~~~~~~~~~d~q~~e~~~~~~~~Ia~~fgVpp~~lg~~~~~~~s~~e~~~~~~~~~~l~P~~~~ie~~ln~~l~~~ 336 (518) .|-+++++..+-...- .+-.++.+...+..+|||..++ .++..|.+..+|+..++.|++++.+..|.. .+ T Consensus 179 ~~ddItQL~kDYStsl-k~die~lkS~l~Sq~GinekIL------~GsAtE~q~iAyy~rtVePILkQyek~liY---~~ 248 (279) T protein:vir:40 179 SDDDIKQIQPDYSGSL-QNDANLAIEIALSEYGMPRELL------YGQSNEVTIIAFAIQKVLPLLKQHDKNIIF---NQ 248 (279) T ss_pred CCceeEeecccccccc-HHHHHHHHHHHHhhcCCchhhc------cccCchhhhhhHHHhhHHHHHHHhcccccc---hh Confidence 9999999876544333 3345677889999999999998 333458999999999999999997754422 10 Q ss_pred hhccceeeechhhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHHhCCCCCCccCc Q lcl|Aclame:pro 337 WVRKNRMKFDIDDVIQPDWEAKSESTQKMVNSGVATPNEGREIMGLPRSDDPKAD 391 (518) Q Consensus 337 ~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~T~NE~R~~~g~~pi~~~~gD 391 (518) +|... .+.+-...|.+ |-.-.+.+-+|+. .| T Consensus 249 -------E~fv~------------y~ttta~gg~~--~s~~~~~~~~~~~---~~ 279 (279) T protein:vir:40 249 -------ENFVA------------YISTTAKGGAI--ESKSSKRDSEPVG---ND 279 (279) T ss_pred -------hhhhh------------hheecccCccc--ccccccccCCCCC---CC Confidence 11100 00000011111 1111112223332 22 No 217 >protein:vir:101494 Length: 527 # NCBI annotation: gp9 # Family: family:all:6920 # MgeID: mge:1627 # MgeName: PLot # Cross-refs: genbank:acc:YP_655388;genbank:gi:109522576;genbank:GeneID:4157566 Probab=96.48 E-value=0.00058 Score=38.33 Aligned_cols=411 Identities=11% Similarity=0.011 Sum_probs=183.0 Q ss_pred CCCCCCCCCccccccccchhhhhhhccCccCCcccCcc-------chhhHHHHhhhHHHHHHHHH-------------HH Q lcl|Aclame:pro 1 MLLANGQTLSAPAMAELSPQMQDSYYYAPAVGMQLERQ-------FSLYGGIYKNQPWVRTVIAK-------------RA 60 (518) Q Consensus 1 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~v~~~v~~-------------ia 60 (518) |-..+++=-++++++. +.......++.. +.++...|.++.-=+..|-. -+ T Consensus 1 ~~~~~~~~~~~~~~~~----------g~~~~p~~v~~~d~~Rl~aY~l~~~~y~n~~~~~~~~lrg~~~~~~r~~~~ps~ 70 (527) T protein:vir:10 1 MGQDKRQYGSTQQLRA----------GEANFPNAVTDFDKARLASYRLYEDMYLTNTSDYQVILRGGDEGDQRPIYVPNG 70 (527) T ss_pred CCccccccCCCcCcCC----------ccccCcccCCHHHHHHHHHHHHHHHHhcCchhheeeecCCccccccceeeehhh Confidence 7666666544443322 222111112211 11122222222111110000 00 Q ss_pred HhhccCceEEEEecCCceeeecchHHHHHhhccCccCCHHHHHHHHHHHHHHcCCeeEEeeeCC---CCceeeeeeeCCc Q lcl|Aclame:pro 61 QALARLPVKCMFTSGDTETEEHDTGYAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQKNK---SGTPEKLMPMHPS 137 (518) Q Consensus 61 ~~ia~lp~~v~~~~~~~~~~~~~~~~~~l~~~PN~~~t~~~f~~~~~~~~ll~G~~~~~i~~~~---~G~~~~l~~l~p~ 137 (518) ..|-.-+.++.-...+......+..+..+++..-...++.....+.-.+.++.|.+...+.++. .|.-+.+..++|. T Consensus 71 ~~~~~~~~~~~~~g~~~~~~~~~e~v~~~lr~~~~~e~l~~~~~~~~r~~~vlGDg~f~l~wD~~k~~~~R~~v~~~DP~ 150 (527) T protein:vir:10 71 EKLIEAKMRFLGQGLKWEFSKKDAKVDDAIKVLFDRENWEQKFESLKRWTEIRGDYVLLLIGDDEKDEGSRLSLHEVDPS 150 (527) T ss_pred HHhhCCcceeeccCccccccchhHHHHHHHHHHHHHhhhHHHHHHHHHhhhhhcceeEEEeeccCCCcCCCceEeecCcc Confidence 0000000010000000000111111222222111223444455666777788999988888884 2334567777777 Q ss_pred ceEEEeccCcceE---EEEe-----eccCC----------------------CCcee------E---------------- Q lcl|Aclame:pro 138 RVAIKRNSRTGRY---EYYF-----QAGAG----------------------VGTQL------V---------------- 165 (518) Q Consensus 138 ~v~~~~~~~~~~~---~~~~-----~~~~~----------------------~~~~~------~---------------- 165 (518) .+.+..+.++... +|.. ..... .+|.. . T Consensus 151 ~~f~~ed~d~~~~v~~v~~~~~~~~P~d~~~~~~~ar~~~~~~~l~~~g~~~~~G~~~yt~~~w~lg~w~d~~e~p~~~~ 230 (527) T protein:vir:10 151 TYFPYEDPRYPGQVLGVYLVDEYPHPDSEKKNEKCARVQKYMKTLDDDGKPVPGGAIKYTEELYEPGKWDDRPESPLEPD 230 (527) T ss_pred eeeeeecCCCCCceeeEEEeeeccCCccccccceehhhhhhhhhcCcccccccCcceeeeeceeeccccccccccccchh Confidence 7666655543211 1100 00000 00000 0 Q ss_pred ----------------EEeeeeeEEeecCCCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHccCCcceeeeeCCcCCH Q lcl|Aclame:pro 166 ----------------SFADDEVVPIRFFNPDGLERGLSLMESLKSTIFSEDSSRNATAAMWKNAGRPNLVLRHEKRLSP 229 (518) Q Consensus 166 ----------------~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~p~gil~~~~~~~~ 229 (518) .+.--.|+||+...+.+..+|.|-+.-+...+........-.....+-++.|-.+++.-...+ T Consensus 231 ~~~~~~~~~~l~~lp~pi~fiPvV~~~t~p~~~~~WG~S~La~ll~l~deLn~~~Td~s~is~~sG~Pi~~~tg~~~vd- 309 (527) T protein:vir:10 231 DIKKLSTLTEEEPLPEQITTLPVFHFRGHPIMNAMFGRSGLAGLESLIASVNQTMTDEDLIMVFGGLGFYATDSAPPRD- 309 (527) T ss_pred hhhhhcCceeeecccCCCCccceEeecCCCccccccChhhHhHHHHHHHHHhhhhhHHHHHHHHhCCceeeeccccccc- Confidence 001112688987777788899999998877777766555555555555777766553322111 Q ss_pred HHHHHHHHHHHHHhcCccccccceeccCCcccccccCChhhHHHHHHHHHHHHHHHHHhccchHhhccccccccccHHHH Q lcl|Aclame:pro 230 EAQQRLREQFDRAHAGSSNTGKTMVVEEGMEPIPLQLTAVEMQFIEARQLNREEVCGVYDIAPPIVHILDRATFSNISAQ 309 (518) Q Consensus 230 e~~~~~~~~~~~~~~g~~n~g~~~vl~~g~~~~~~~~~~~d~q~~e~~~~~~~~Ia~~fgVpp~~lg~~~~~~~s~~e~~ 309 (518) . +-......- ..|.++-++++.++..+...+.-..+........+.|+.+=++|..-+|..+.++..+. . T Consensus 310 --~---~G~~~~~~V---gPG~iweL~e~ak~~~v~~~~~la~~~~h~~~L~~~l~~vA~~PavA~G~vD~s~~~SG--~ 379 (527) T protein:vir:10 310 --S---RGNMVPWTI---SPLGMVEHGQNNKIYRVNGVASLEPSQTHMTKAEEAMQQTKGIPDIAVGVVDAAVAESG--I 379 (527) T ss_pred --c---cCCcCcccc---CCceeEecCCCcceeeccchhhhHHHHHHHHHHHHHHHHhhcCCeeeeccccCCcCcHH--H Confidence 0 000011111 12345557888888888776655557777888888999999999999996554332111 1 Q ss_pred HHHHHHHHHHHHHHHHHHH-------H---H-----hhh-------cchhhccceeeechhhhhccCHHHHHHHHHHHHh Q lcl|Aclame:pro 310 MRAFYRDTMAIPIARIQSA-------M---D-----KYV-------GQYWVRKNRMKFDIDDVIQPDWEAKSESTQKMVN 367 (518) Q Consensus 310 ~~~~~~~~l~P~~~~ie~~-------l---n-----~~l-------~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~ 367 (518) -++-.+.|++.+.+.. + . .+| +...+..+.+++.+...+..|.++..+...+++. T Consensus 380 ---ALeL~L~PLlar~~rk~L~~~~vqrq~~~~~~~~~L~aye~v~~~d~~~~~~v~ivf~p~lP~D~~avie~v~tL~~ 456 (527) T protein:vir:10 380 ---ALDLKLSAILSSCAEQELELKSVLKQFFYNLVTQWLPAYEGVGIDDADKKLTVTITFRDPKPVNSEKRFNQLLQLWE 456 (527) T ss_pred ---HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHhhhcccCCCccccceEEEecccCCCCHHHHHHHHHHHHH Confidence 1112344444432211 0 0 010 1111122334566677899999999999999999 Q ss_pred CCCcCHHHHHHHHhCC-CCCCccCc--eeeecccccccccccccCCCCCCCCCCCCcccCCCCCccCCccccccccCh Q lcl|Aclame:pro 368 SGVATPNEGREIMGLP-RSDDPKAD--ELYANSALQPLGATPDGAVEGEEAPAPKRPASTPVASLDQSPPASVPGLSP 442 (518) Q Consensus 368 ~g~~T~NE~R~~~g~~-pi~~~~gD--~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 442 (518) +|+++.-=+-++|+-- -++++..+ ++..-.-...+..+. +.+.-.. +.+....-+.++......+. .. T Consensus 457 aGi~S~~tAv~~L~~~~g~eD~E~E~~~I~~era~~a~a~a~---A~~~~~a---~~~~~~g~~~~~~d~~~~~~-~~ 527 (527) T protein:vir:10 457 AGLIPAKKLTEELSKIMGFELTEEDFKQATEDKKTQGIAQAE---AADPFGA---QMAAEQGIPDEEDDQALNGQ-PL 527 (527) T ss_pred cCchhHHHHHHHHHhccCCCChHHHHHHHHHHHHHHhHHhhh---hcCchhh---hhccccCCCCCCcccccCCC-CC Confidence 9999999887777211 13333333 110000000000000 0000000 00000001111111111100 00 No 218 >protein:vir:102239 Length: 527 # NCBI annotation: gp9 # Family: family:all:6920 # MgeID: mge:1648 # MgeName: PBI1 # Cross-refs: genbank:acc:YP_655205;genbank:gi:109522785;genbank:GeneID:4157478 Probab=96.47 E-value=0.0006 Score=38.26 Aligned_cols=411 Identities=12% Similarity=0.007 Sum_probs=182.9 Q ss_pred CCCCCCCCCccccccccchhhhhhhccCccCCcccCcc-------chhhHHHHhhhHHHHHHHHH-------------HH Q lcl|Aclame:pro 1 MLLANGQTLSAPAMAELSPQMQDSYYYAPAVGMQLERQ-------FSLYGGIYKNQPWVRTVIAK-------------RA 60 (518) Q Consensus 1 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~v~~~v~~-------------ia 60 (518) |-..+++=-++++++. +.......++.. +.++...|.++.-=+..|-. -+ T Consensus 1 ~~~~~~~~~~~~~~~~----------g~~~~p~~v~~~d~~Rl~aY~l~~~~y~n~~~~~~~~lrg~~~~~~r~~~~ps~ 70 (527) T protein:vir:10 1 MGQDKRQYGSTQQLRA----------GEANFPNAVTDFDKARLASYRLYEDMYLTNTSDYQVILRGGDEGDQRPIYVPNG 70 (527) T ss_pred CCccccccCCCcCcCC----------ccccCcccCCHHHHHHHHHHHHHHHHhcCchhheeeecCCccccccceeeehhh Confidence 7666666544443322 222111112211 11122222222111110000 00 Q ss_pred HhhccCceEEEEecCCceeeecchHHHHHhhccCccCCHHHHHHHHHHHHHHcCCeeEEeeeCC---CCceeeeeeeCCc Q lcl|Aclame:pro 61 QALARLPVKCMFTSGDTETEEHDTGYAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQKNK---SGTPEKLMPMHPS 137 (518) Q Consensus 61 ~~ia~lp~~v~~~~~~~~~~~~~~~~~~l~~~PN~~~t~~~f~~~~~~~~ll~G~~~~~i~~~~---~G~~~~l~~l~p~ 137 (518) ..|-.-+.++.-...+......+..+..+++..-...++.....+.-.+.++.|.+...+.++. .|.-+.+..++|. T Consensus 71 ~~~~~~~~~~~~~g~~~~~~~~~e~v~~~lr~~~~~e~l~~~~~~~~r~~~vlGDg~f~l~wD~~k~~~~R~~v~~~DP~ 150 (527) T protein:vir:10 71 EKLIEAKMRFLGQGLKWEFSKKDAKVDDAIRVLFDRENWEQKFESLKRWTEIRGDYVLLLIGDDEKDEGSRLSLHEVDPS 150 (527) T ss_pred HHhhCCcceeeccCccccccchhHHHHHHHHHHHHHhhhHHHHHHHHHhhhhhcceeEEEeeccCCCcCCCceEeecCcc Confidence 0000000010000000000111111222222111223444455666777788999988888884 2334567777777 Q ss_pred ceEEEeccCcceE---EEEe-----eccCC----------------------CCcee------E---------------- Q lcl|Aclame:pro 138 RVAIKRNSRTGRY---EYYF-----QAGAG----------------------VGTQL------V---------------- 165 (518) Q Consensus 138 ~v~~~~~~~~~~~---~~~~-----~~~~~----------------------~~~~~------~---------------- 165 (518) .+.+..+.++... +|.. ..... .+|.. . T Consensus 151 ~~f~~ed~d~~~~v~~v~~~~~~~~P~d~~~~~~~ar~~~~~~~l~~~g~~~~~G~~~yt~~~w~lg~w~d~~e~p~~~~ 230 (527) T protein:vir:10 151 TYFPYEDPRYPGQVLGVYLVDEYPHPDSEKKNEKCARVQKYMKTLDDDGKPVPGGAIKYTEELYEPGKWDDRPESPLEPD 230 (527) T ss_pred eeeeeecCCCCCceeeEEEeeeccCCccccccceehhhhhhhhhcCcccccccCcceeeeeceeeccccccccccccchh Confidence 7666655543211 1100 00000 00000 0 Q ss_pred ----------------EEeeeeeEEeecCCCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHccCCcceeeeeCCcCCH Q lcl|Aclame:pro 166 ----------------SFADDEVVPIRFFNPDGLERGLSLMESLKSTIFSEDSSRNATAAMWKNAGRPNLVLRHEKRLSP 229 (518) Q Consensus 166 ----------------~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~p~gil~~~~~~~~ 229 (518) .+.--.|+||+...+.+..+|.|-+.-+...+........-.....+-++.|-.+++.-...+ T Consensus 231 ~~~~~~~~~~l~~lp~pi~fiPvV~~~t~p~~~~~WG~S~La~ll~l~deLn~~~Td~s~is~~sG~Pi~~~tg~~~vd- 309 (527) T protein:vir:10 231 DIKKLSTLTEEEPLPEQITTLPVFHFRGHPIMNAMFGRSGLAGLESLIASVNQTMTDEDLIMVFGGLGFYATDSAPPRD- 309 (527) T ss_pred hhhhhcCceeeecccCCCCccceEeecCCCccccccChhhHhHHHHHHHHHhhhhhHHHHHHHHhCCceeeeccccccc- Confidence 001112688987777788899999998877777766555555555555777766553322111 Q ss_pred HHHHHHHHHHHHHhcCccccccceeccCCcccccccCChhhHHHHHHHHHHHHHHHHHhccchHhhccccccccccHHHH Q lcl|Aclame:pro 230 EAQQRLREQFDRAHAGSSNTGKTMVVEEGMEPIPLQLTAVEMQFIEARQLNREEVCGVYDIAPPIVHILDRATFSNISAQ 309 (518) Q Consensus 230 e~~~~~~~~~~~~~~g~~n~g~~~vl~~g~~~~~~~~~~~d~q~~e~~~~~~~~Ia~~fgVpp~~lg~~~~~~~s~~e~~ 309 (518) . +-......- ..|.++-++++.++..+...+.-..+........+.|+.+=++|..-+|..+.++..+. . T Consensus 310 --~---~G~~~~~~V---gPG~iweL~e~ak~~~v~~~~~la~~~~h~~~L~~~l~~vA~~PavA~G~vD~s~~~SG--~ 379 (527) T protein:vir:10 310 --S---RGNMVPWTI---SPLGMVEHGQNNKIYRVNGVASLEPSQTHMNKAEEAMQQTKGIPDIAVGVVDAAVAESG--I 379 (527) T ss_pred --c---cCCcCcccc---CCceeEecCCCcceeeccchhhhHHHHHHHHHHHHHHHHhhcCCeeeeccccCCcCcHH--H Confidence 0 000011111 12345557888888888776655557777888888999999999999996554332111 1 Q ss_pred HHHHHHHHHHHHHHHHHHH-------H---H-----hhh-------cchhhccceeeechhhhhccCHHHHHHHHHHHHh Q lcl|Aclame:pro 310 MRAFYRDTMAIPIARIQSA-------M---D-----KYV-------GQYWVRKNRMKFDIDDVIQPDWEAKSESTQKMVN 367 (518) Q Consensus 310 ~~~~~~~~l~P~~~~ie~~-------l---n-----~~l-------~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~ 367 (518) -++-.+.|++.+.+.. + . .+| +...+..+.+++.+...+..|.++..+...+++. T Consensus 380 ---ALeL~L~PLlar~~rk~L~~~~Vqrq~~~~~~~~~L~aye~v~~~d~~~~~~v~ivf~p~lP~D~~avie~v~tL~~ 456 (527) T protein:vir:10 380 ---ALDLKLSAILSSCAEQELELKSVLKQFFYNLVTQWLPAYEGVGIDDADKKLTVTITFRDPKPVNNEKRFAQLLELWE 456 (527) T ss_pred ---HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHhhhcccCCCccccceEEEecccCCCCHHHHHHHHHHHHH Confidence 1112344444432211 0 0 010 1111122334566677899999999999999999 Q ss_pred CCCcCHHHHHHHHhCC-CCCCccCceeee--cccccccccccccCCCCCCCCCCCCcccCCCCCccCCccccccccCh Q lcl|Aclame:pro 368 SGVATPNEGREIMGLP-RSDDPKADELYA--NSALQPLGATPDGAVEGEEAPAPKRPASTPVASLDQSPPASVPGLSP 442 (518) Q Consensus 368 ~g~~T~NE~R~~~g~~-pi~~~~gD~~~~--~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 442 (518) +|+++.-=+-++|+-- -++++..+.--+ -.-...+..+. +.+.-.. +.+....-+.++......+. .. T Consensus 457 aGiiS~etAv~~L~~~~g~eD~E~E~~~I~~era~~a~a~a~---a~~~~~a---~~~~~~g~~~~~~d~~~~~~-~~ 527 (527) T protein:vir:10 457 AGLIPAKKLTEELSKIMGFELTEEDFRQATEDKKTQGIAQAE---AADPFGA---QMAAEQGIPDEEDDQALNGQ-PL 527 (527) T ss_pred cCchhHHHHHHHHHhccCCCchHHHHHHHHHHHHHHhHHhhh---hcCchhh---hhccccCCCCCCcccccCCC-CC Confidence 9999999887777211 133333331000 00000000000 0000000 00000001111111111100 00 No 219 >protein:vir:102950 Length: 471 # NCBI annotation: portal protein # Family: family:all:125 # MgeID: mge:1461 # MgeName: EJ-1 # Cross-refs: genbank:acc:NP_945279;genbank:gi:39653714;interpro:IPR006428;uniprot:Q708N3;genbank:GeneID:2672864 Probab=95.93 E-value=0.0012 Score=36.52 Aligned_cols=377 Identities=8% Similarity=0.009 Sum_probs=158.8 Q ss_pred CCCCCCCCCccccccccchhhhhhhccCccCCcccCccchhhHHHHhhhHHHHHHHHHHHHhhccCceEEEEecCCceee Q lcl|Aclame:pro 1 MLLANGQTLSAPAMAELSPQMQDSYYYAPAVGMQLERQFSLYGGIYKNQPWVRTVIAKRAQALARLPVKCMFTSGDTETE 80 (518) Q Consensus 1 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~v~~ia~~ia~lp~~v~~~~~~~~~~ 80 (518) -.=|+ +....... ................. ... ...-..++....+|+..+.-+.+-|..+-..++ T Consensus 30 Yy~g~-hdi~~~~~-~~~~~~~~~~~~~~~~~-~~~------~~~ki~~n~~~~Ivd~~~~yl~G~p~~~~~~~~----- 95 (471) T protein:vir:10 30 YYRNE-NDIKRKRK-PADKKGAENEAKAEDNA-FRN------ADNRISHNWHQLLLDQKKAYALTYPPTFDVDDK----- 95 (471) T ss_pred Hhccc-cccccccc-hhhhhcccccccccccc-ccc------ccceeccchhHHHHHhhhhhhcccCceeccCCh----- Confidence 00011 00000000 00000000000000000 000 000112456667788877777778877632211 Q ss_pred ecchHHHHHhhccCccCCHHHHHHHHHHHHHHcCCeeEEeeeCC-CCceeeeeeeCCcceEEEeccCcc-eEEE---Eee Q lcl|Aclame:pro 81 EHDTGYAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQKNK-SGTPEKLMPMHPSRVAIKRNSRTG-RYEY---YFQ 155 (518) Q Consensus 81 ~~~~~~~~l~~~PN~~~t~~~f~~~~~~~~ll~G~~~~~i~~~~-~G~~~~l~~l~p~~v~~~~~~~~~-~~~~---~~~ 155 (518) .....+..++. | ........+...++.+|.+|..+..+. +|. ..+..++|..+.++++.... ...+ .|. T Consensus 96 ~~~~~l~~~~~--n---~~~~~~~~~~~~~~~~G~~~~~v~~d~~~g~-~~~~~~~p~~~~~i~d~~~~~~~~~~ir~~~ 169 (471) T protein:vir:10 96 KVNDMIVDVLG--D---DYERISKQLCVNAGNAGIAWLHVWKDASDNS-FRYACVDSKEVIPIYSKSLDKKSIGVLRVYS 169 (471) T ss_pred HHHHHHHHHHh--c---CHHHHHHHHHHHHhhCCeEEEEEEeeCCCCe-eEEEEEcccceEEEEcCCCCCceEEEEEEEE Confidence 01112222222 2 234445567788999999999988874 465 45777899998888765431 1111 111 Q ss_pred ccCCCCce----eEEEeeeeeEEeecCC-------------------------------CC---------cccccchHHH Q lcl|Aclame:pro 156 AGAGVGTQ----LVSFADDEVVPIRFFN-------------------------------PD---------GLERGLSLME 191 (518) Q Consensus 156 ~~~~~~~~----~~~~~~~~vih~~~~~-------------------------------~~---------~~~~G~s~~~ 191 (518) .....++. ...+....+.|++... +. +...|.|-+. T Consensus 170 ~~~~~~~~~~~~~~vy~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iPvv~~~n~~~~~sd~e 249 (471) T protein:vir:10 170 SIDETDGKNYTVYEYWNDKECSFYRHEKEKPLEELETFQAISLIDTMNGDRSSDNSFKHDFGLVPFIPFKNNEIETNDLK 249 (471) T ss_pred eeccCCCceeEEEEEEeCCcEEEEEecCCcccccccccccccccccccccccccccccCCCCceeEEEeccCCCCCCchH Confidence 11111111 1112223333332110 00 0124677777 Q ss_pred HHHHHHHHHHHHHHHHHHHHHccCCcceeeeeCCcCCHHHHHHHHHHHHHHhcCccccccceecc-----CCcccccccC Q lcl|Aclame:pro 192 SLKSTIFSEDSSRNATAAMWKNAGRPNLVLRHEKRLSPEAQQRLREQFDRAHAGSSNTGKTMVVE-----EGMEPIPLQL 266 (518) Q Consensus 192 ~~~~~i~~~~~~~~~~~~~~~ng~~p~gil~~~~~~~~e~~~~~~~~~~~~~~g~~n~g~~~vl~-----~g~~~~~~~~ 266 (518) .....++....+.....+.+...+.|-.+++-......+ .....+.. ++++.++ .+.+++.++. T Consensus 250 ~v~~liDa~d~~~S~~~~~~~~~~~~~lv~~g~~~~~~~---~~~~~~~~--------~~~i~~~~~~~~~~~~~~~l~~ 318 (471) T protein:vir:10 250 PIKDLVDVYDKVFSGFVNDTDDVQEVIFVLTNYGGQDKQ---EFLEDLKR--------YKMIKMDNDGMGDQSGVTTIAI 318 (471) T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhCceeeeecCCccccc---hhHHHhhc--------CCeEEecCCCCccCccceEEee Confidence 777777666665555566666666675555443221111 11111111 1222222 1223333333 Q ss_pred ChhhHHHHHHHHHHHHHHHHHhccchHhhccccccccccHHH----------HHHHHHHHHHHHHHHHHHHHHHhhhcch Q lcl|Aclame:pro 267 TAVEMQFIEARQLNREEVCGVYDIAPPIVHILDRATFSNISA----------QMRAFYRDTMAIPIARIQSAMDKYVGQY 336 (518) Q Consensus 267 ~~~d~q~~e~~~~~~~~Ia~~fgVpp~~lg~~~~~~~s~~e~----------~~~~~~~~~l~P~~~~ie~~ln~~l~~~ 336 (518) ......+....+...+.|...-++|..-....++.++...+. .....+..+++-.++.|... + .. T Consensus 319 ~~~~~~~~~~~~~l~~~I~~~s~tp~~~~~~~gn~Sg~Alk~~~~~l~~k~~~~~~~~~~~l~~~~~li~~~----~-~~ 393 (471) T protein:vir:10 319 DIPTEARNLILERTKKQIFISGQGVNPETDKLGNSSGVALKFLYSLLELKAGNMETQFRSGYATLVKMILKH----L-GL 393 (471) T ss_pred cCChHHHHHHHHHHHHHHHHHhCCcCCCcccccCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----h-cc Confidence 333445666777778888888888754322222111111111 11122222222222222211 1 11 Q ss_pred hhccceeeechhhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHHhCCCCCCccCceeeecccccccccccccC-CCCCCC Q lcl|Aclame:pro 337 WVRKNRMKFDIDDVIQPDWEAKSESTQKMVNSGVATPNEGREIMGLPRSDDPKADELYANSALQPLGATPDGA-VEGEEA 415 (518) Q Consensus 337 ~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~T~NE~R~~~g~~pi~~~~gD~~~~~~n~~~~~~~~~~~-~~~~~~ 415 (518) .....+++.+...+..|..+.++.+.++ .|+++..-+.++++. ++++.. .+....... ...+.. T Consensus 394 -~d~~~i~i~f~~~~p~n~~e~~~~~~kl--~g~iS~et~~~~~p~--v~D~~~----------E~eri~~E~~~~~~~~ 458 (471) T protein:vir:10 394 -SDKLKIKQTWTRNSINNDTEMAQVVSTL--ATITSRENVAKSNPI--VEDWQD----------ELRLQKAEQEGRSEKL 458 (471) T ss_pred -CCCceeEEEeCCCCCCCHHHHHHHHHHH--hccCchHHHHHhCCC--CCCHHH----------HHHHHHHHHHHHHhcc Confidence 1223456666778888999999999887 578888778777643 332210 111111100 000000 Q ss_pred CCCCCcccCCCCCccCCccccccccC Q lcl|Aclame:pro 416 PAPKRPASTPVASLDQSPPASVPGLS 441 (518) Q Consensus 416 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 441 (518) +.. .+.++++ +.+ T Consensus 459 ~~~--------~~~~~~~-----e~~ 471 (471) T protein:vir:10 459 YDM--------EEVEHES-----EVE 471 (471) T ss_pred ccc--------CCCCCcc-----ccC Confidence 000 0000000 000 No 220 >protein:vir:9922 Length: 489 # NCBI annotation: hypothetical protein # Family: family:all:125 # MgeID: mge:178 # MgeName: 315.6 # Cross-refs: genbank:acc:NP_795684;genbank:gi:28876464;genbank:GeneID:1257980 Probab=95.66 E-value=0.0017 Score=35.81 Aligned_cols=404 Identities=10% Similarity=0.061 Sum_probs=158.8 Q ss_pred CCCCCCCCCccc---------cccccchhhhhhhccCc-c--CCcccCccchhhHHHHhhhHHHHHHHHHHHHhhccCce Q lcl|Aclame:pro 1 MLLANGQTLSAP---------AMAELSPQMQDSYYYAP-A--VGMQLERQFSLYGGIYKNQPWVRTVIAKRAQALARLPV 68 (518) Q Consensus 1 ~~f~~~~~~~~~---------~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~v~~~v~~ia~~ia~lp~ 68 (518) +=+..+-....- .....-..+...+.+.- . ........... .. ...+....+|+..+.-+-+-|+ T Consensus 9 ~~~~~~~~~~~~~~~i~~~~~~~~~r~~~~~~yy~g~~~i~~~~~~~~~~~~~-~k--i~~n~~~~iv~~~~~~l~g~~~ 85 (489) T protein:vir:99 9 IDYESKLWIDQLKNYISRFKAEQLERLKELKRYYLGDNNIKYRPAKTDKYAAD-NR--IASDFAKYITVFEQGYMLGVPV 85 (489) T ss_pred eCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccCccccccccccccCCc-ce--eecchHHHHHHHHhhhhccCCc Confidence 111111110000 00000001111111110 0 00000000000 01 1245667788888887777777 Q ss_pred EEEEecCCceeeecchHHHHHhhccCccCCHHHHHHHHHHHHHHcCCeeEEeee----CCCCceeeeeeeCCcceEEEec Q lcl|Aclame:pro 69 KCMFTSGDTETEEHDTGYAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQK----NKSGTPEKLMPMHPSRVAIKRN 144 (518) Q Consensus 69 ~v~~~~~~~~~~~~~~~~~~l~~~PN~~~t~~~f~~~~~~~~ll~G~~~~~i~~----~~~G~~~~l~~l~p~~v~~~~~ 144 (518) .+...++. ....+..++.. | ....+...+..+++.+|.+|..+.. +.+|+ ..+..++|..+.+.++ T Consensus 86 ~~~~~d~~-----~~~~l~~~~~~-n---~~~~~~~~~~~~~~~~G~~~~~v~~~~~~d~~~~-~~i~~~~p~~~~~v~d 155 (489) T protein:vir:99 86 EYKNENKD-----LQAAIDLMSVR-N---NEDYHNVKIKTDLSIYGRAYELLTVEKIDDKKTE-VKLYQLPAEQTFVIYD 155 (489) T ss_pred eeecCChh-----HHHHHHHHHhh-c---ChhHHHHHHHHHHhhCCeEEEEEeeccCcCCCcc-eEEEEEcccceEEEEc Confidence 76322111 11223333332 2 3345567778889999999977654 23333 4577788888887776 Q ss_pred cCc-ceEEEE---eeccCCCCc--eeE-EEee----------------------------eeeEEeecCCCCcccccchH Q lcl|Aclame:pro 145 SRT-GRYEYY---FQAGAGVGT--QLV-SFAD----------------------------DEVVPIRFFNPDGLERGLSL 189 (518) Q Consensus 145 ~~~-~~~~~~---~~~~~~~~~--~~~-~~~~----------------------------~~vih~~~~~~~~~~~G~s~ 189 (518) ... ....+. |......+. ... .+.+ -.|+||++. ..|.|. T Consensus 156 d~~~~~~~~~i~~~~~~~~~~~~~~~~~~y~~~~i~~~~~~~~~~~~~~~~~~~~~~~g~vPvv~~~n~-----~~~~s~ 230 (489) T protein:vir:99 156 DTYQRNSLMAVHFYDIDYGSGKRKQIIKAYTSDTIYTYEDYNLETKGMRLKDYEGHFFKGVPVNEYANN-----EERTGA 230 (489) T ss_pred CCCCCceEEEEEEEEEecCCCceEEEEEEEeCCcEEEEEecCCCcccceecccccccCCceeEEEeecC-----CCCCCc Confidence 432 111110 111111000 000 1111 124444432 236666 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHccCCcceeeeeCCcCCHHHHHHHHHHHHHHhc------CccccccceeccCCc---- Q lcl|Aclame:pro 190 MESLKSTIFSEDSSRNATAAMWKNAGRPNLVLRHEKRLSPEAQQRLREQFDRAHA------GSSNTGKTMVVEEGM---- 259 (518) Q Consensus 190 ~~~~~~~i~~~~~~~~~~~~~~~ng~~p~gil~~~~~~~~e~~~~~~~~~~~~~~------g~~n~g~~~vl~~g~---- 259 (518) +......++....+..-..+.....+.|-.+++- .....+........+.-... .....++++.+..+. T Consensus 231 ~~~v~~liDa~d~~~s~~~~~~~~~~~~~l~i~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (489) T protein:vir:99 231 YESVLDNIDAYDLSQSELANFQQDSVNALLVIAG-NAYTGADENDYLDDGRLNPNGRLAISIGFKKAQVLILDDNPNPNG 309 (489) T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHhhhhhhhhcc-CCcccccchhhhhhcccccccccccccccccceeeeeccccCccc Confidence 6666555555554444444444444444433322 11122222222222221111 111223344444332 Q ss_pred ---ccccccCChhhHHHHHHHHHHHHHHHHHhccchHhh-ccccccccccHH----------HHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 260 ---EPIPLQLTAVEMQFIEARQLNREEVCGVYDIAPPIV-HILDRATFSNIS----------AQMRAFYRDTMAIPIARI 325 (518) Q Consensus 260 ---~~~~~~~~~~d~q~~e~~~~~~~~Ia~~fgVpp~~l-g~~~~~~~s~~e----------~~~~~~~~~~l~P~~~~i 325 (518) +...+........+....+...+.|...-++|..-. +..++.+..-.+ ......+...++-.++.| T Consensus 310 ~~~~~~~l~~~~~~~~~~~~~~~l~~~i~~~s~~p~~~~~~~~~n~Sg~Al~~~~~~l~~k~~~k~~~~~~~l~~~~~li 389 (489) T protein:vir:99 310 VKPQAYFLKKEYDTAGSEAYKNRLVADILRFTFTPDTQDMKFSGVQSGESMKYKLMASDNYREKQERLFKKGLMRRLRLA 389 (489) T ss_pred cccceeeeeecCChHHHHHHHHHHHHHHHHHhCCcccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Confidence 222233333344455566777888888888885322 222211111110 111123333333333333 Q ss_pred HHHHHhhhcchhh--ccceeeechhhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHHhCCCCCCccCceeeecccccccc Q lcl|Aclame:pro 326 QSAMDKYVGQYWV--RKNRMKFDIDDVIQPDWEAKSESTQKMVNSGVATPNEGREIMGLPRSDDPKADELYANSALQPLG 403 (518) Q Consensus 326 e~~ln~~l~~~~~--~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~T~NE~R~~~g~~pi~~~~gD~~~~~~n~~~~~ 403 (518) ...+...-..... ....+++.+..-+..|..+.++.+.+++ |+++...+.++++. ++++.... -+..+. T Consensus 390 ~~~~~~~~~~~~~~~~~~~i~v~f~~~~p~d~~~~~~~~~kl~--giis~et~~~~l~~--v~~~d~~~-----E~~ri~ 460 (489) T protein:vir:99 390 ANIWAIKGNEATTYSLVNDTSIVFTPNLPQNDNEIVTAAQNLY--GIVSDQTIFEILNT--VTGVDAEA-----ELKRLK 460 (489) T ss_pred HHHHhhcCCccccccccccceEEeCCCCCcCHHHHHHHHHHHh--ccCCHHHHHHhcCC--CCchhHHH-----HHHHHH Confidence 3332211111000 1113455556677788888999888875 78998888877633 22111110 000110 Q ss_pred cccccCCCCCCCCCCCCcccCCCCCccCCcccccc Q lcl|Aclame:pro 404 ATPDGAVEGEEAPAPKRPASTPVASLDQSPPASVP 438 (518) Q Consensus 404 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 438 (518) ..... .....+.......+.++++.++.+ T Consensus 461 ~E~~~------~~~~~~~~~~~~~~~~~~~~~~~p 489 (489) T protein:vir:99 461 EEADK------KQSLPEPRLVGDASGQEEPTAEKP 489 (489) T ss_pred HHHHH------HhccccccccCCCCCCcCCCCCCC Confidence 00000 000001111111111112222221 No 221 >protein:vir:105154 Length: 525 # NCBI annotation: conserved phage-related protein # Family: family:all:6660 # MgeID: mge:1466 # MgeName: C-St # Cross-refs: genbank:acc:YP_398597;genbank:gi:80159853;genbank:GeneID:3772992 Probab=95.40 E-value=0.0021 Score=35.21 Aligned_cols=411 Identities=11% Similarity=0.072 Sum_probs=165.9 Q ss_pred CCCCCCCCCccccccccchhhhhhhccCccCCcccCccchhhHHHHhhhHHHHHHHHHHHHhhccCceEEEEecCCceee Q lcl|Aclame:pro 1 MLLANGQTLSAPAMAELSPQMQDSYYYAPAVGMQLERQFSLYGGIYKNQPWVRTVIAKRAQALARLPVKCMFTSGDTETE 80 (518) Q Consensus 1 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~v~~ia~~ia~lp~~v~~~~~~~~~~ 80 (518) -||.++.-..... ..+...|......-..+ ..+..-.|....-|+.-.+ -|-+||---|+.+.-.... T Consensus 52 ~~~~ng~i~~v~~-----~~l~~~f~npd~~~~~i---~~l~~y~yi~~~~v~ql~~----li~~lp~l~y~i~~~~~~k 119 (525) T protein:vir:10 52 DLCNNGKIKTVNL-----DTLQLWFNNPDKYINNI---VNLLTYYYIIDGNVFQLYD----LIFSLPPLDYQIKVLKRDK 119 (525) T ss_pred HhhcCCceeeeeH-----HHHHhhhcChHHHHHHH---HHHHHHhhhhcchHHHHHH----HHHhcCCcceeehhhhhcc Confidence 3555544333321 11222222111000000 0000000111122333333 3345554333332211111 Q ss_pred ecchHHHHHhhccCccCCHHHHHHHHHHHHHHcCCeeEEeeeCCCC-ce-----eeeeeeCC------cceEEEecc--- Q lcl|Aclame:pro 81 EHDTGYAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQKNKSG-TP-----EKLMPMHP------SRVAIKRNS--- 145 (518) Q Consensus 81 ~~~~~~~~l~~~PN~~~t~~~f~~~~~~~~ll~G~~~~~i~~~~~G-~~-----~~l~~l~p------~~v~~~~~~--- 145 (518) ..+.-+..++..-..-.-..++-+.+..++...|--.- .|-.+- .| .+|..+-| ..|.++.-. T Consensus 120 ~~~~~~s~~n~~l~k~i~hk~ltrdll~q~a~~gtlig--~wlg~~~~py~~vf~~~kyvfp~~r~~g~~v~vid~~~f~ 197 (525) T protein:vir:10 120 DYKEDLSTINLYLEKKIQHKQLTRDLLVQLAHSGTLIG--TWLGSKREPYFNVFNNLKYVFPYGRAKGKMVAVIDLQWFD 197 (525) T ss_pred chhhHHHHHHHHHHHhHHHHHHHHHHHHHhhccCceeE--eeecCCCCcchhhhhhhhhhccccccCCceEEEEehHHhh Confidence 11111222222111111112222222223333332110 000000 00 01111111 111111000 Q ss_pred --------------------CcceEEEEeeccCCCCceeEEEeeeeeEEeecCCCCc-ccccchHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 146 --------------------RTGRYEYYFQAGAGVGTQLVSFADDEVVPIRFFNPDG-LERGLSLMESLKSTIFSEDSSR 204 (518) Q Consensus 146 --------------------~~~~~~~~~~~~~~~~~~~~~~~~~~vih~~~~~~~~-~~~G~s~~~~~~~~i~~~~~~~ 204 (518) .....+-.|...+..--....+|.+.++|.|...+.. +.-|.|.+..+...|....... T Consensus 198 ~~~~~~r~~~~~~lsp~i~~~~y~~~~~~~~~~~~~~r~i~LP~e~t~~lr~~tl~rnqrlG~s~vtp~l~dI~hk~klr 277 (525) T protein:vir:10 198 EMSELERKLTFENLSPLITENKYKKWKEYNGENEDALRYIMLPISKTLVARIHTLSRNQRLGIPYGTQTLFDIQHKQKLR 277 (525) T ss_pred hhhHHHHHHHHHhhchhhhhhhhhHHhhcccccchhheeeecccceeEEeeecccccCcccCcchhhhHHHHHHHHHHHH Confidence 0000000111111111233567889999999876643 3348888888888888888777 Q ss_pred HHHHHHHHccCCcceeeeeCCcC------CHHHHHHHHHHHHHHhcC-cccccccee--ccCCcccc--cccC--ChhhH Q lcl|Aclame:pro 205 NATAAMWKNAGRPNLVLRHEKRL------SPEAQQRLREQFDRAHAG-SSNTGKTMV--VEEGMEPI--PLQL--TAVEM 271 (518) Q Consensus 205 ~~~~~~~~ng~~p~gil~~~~~~------~~e~~~~~~~~~~~~~~g-~~n~g~~~v--l~~g~~~~--~~~~--~~~d~ 271 (518) +...+....=..|-.+|++.... .+....++....+.+... .+...++.+ ++.=+++. .+.. ..-|. T Consensus 278 d~EqsIA~kii~a~avLk~gg~~gn~mk~p~~~kqkil~gVk~aleK~~kdK~Gi~vi~~Pdfa~~efp~ik~~~~glDg 357 (525) T protein:vir:10 278 DLEQSIADKIIKAMAVLKFRGKDDNDSKVKESAKRKVLAGVKRALEKGVKDKNGIACIAMPDFATFEFPEIKNGDKTLDP 357 (525) T ss_pred HHHHHHHHHhhhhheeeeeccccCccccCchHHHHHHHHHHHHHHhcccccccCeEEEeccceeecccccccCcccCCCc Confidence 77777777777888888876432 222334444444444422 222234444 23322332 2211 11222 Q ss_pred HHHHHHHHHHHHHHHHhccchHhhccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHhhhcch---hhccceeeechh Q lcl|Aclame:pro 272 QFIEARQLNREEVCGVYDIAPPIVHILDRATFSNISAQMRAFYRDTMAIPIARIQSAMDKYVGQY---WVRKNRMKFDID 348 (518) Q Consensus 272 q~~e~~~~~~~~Ia~~fgVpp~~lg~~~~~~~s~~e~~~~~~~~~~l~P~~~~ie~~ln~~l~~~---~~~~~~~~fd~~ 348 (518) + --+...++|-.++|++..+++. +.++|++..-....||.. |.-+++.||+..+ +|+.. ....+.+-|+.+ T Consensus 358 ~---K~d~I~~DI~~A~GlS~sL~nG-dggNyAtaslnld~fykk-igVm~e~Iee~y~-kL~d~Vl~~~k~~nyifnyd 431 (525) T protein:vir:10 358 K---KYDSIDNDITNATGISQVLTNG-TKGNYASAKLNLDVFYKK-IGVMLEIIEEIYN-QLIDIILGEEKGCNYIFQYN 431 (525) T ss_pred h---hhhhhhhhhhhhhccceeeecC-CCCceeeeeeeHHHHHHH-HHHHHHHHHHHHH-HHHhhhcCcccCcceEEecC Confidence 2 1223358899999999999975 355888877777777774 6677888885554 44322 122333345555 Q ss_pred hhhccCHHHHHHHHHHHHhCCCcCHHHHHHHHhCCCCCC----------ccCce-eeecccccccccccccCCCCCCCCC Q lcl|Aclame:pro 349 DVIQPDWEAKSESTQKMVNSGVATPNEGREIMGLPRSDD----------PKADE-LYANSALQPLGATPDGAVEGEEAPA 417 (518) Q Consensus 349 ~l~~~d~~~~~~~~~~~~~~g~~T~NE~R~~~g~~pi~~----------~~gD~-~~~~~n~~~~~~~~~~~~~~~~~~~ 417 (518) .-...+.+++.+.+-++...|+.. --+....|+.--+. --.++ ...|.+...+. +..... T Consensus 432 kd~pi~~kkk~d~LIkL~d~g~s~-k~vldl~gis~e~y~E~s~yEtE~lkl~EKi~pp~~~~v~S--------Gk~~n~ 502 (525) T protein:vir:10 432 KDTPIEREKKLDTLIKLEAQGYSA-KYVLDILGISSEEYFEESIYEIEKLKLREKIMPPLNTNVLS--------GKDGND 502 (525) T ss_pred CCchhhhhhhhhhhhhhhccchhh-hhhhhhhccCcchHHHHHHHHHHHHHHhhhccccccceeee--------cccccc Confidence 555667888888888888888742 22222333321100 00111 11111111111 000011 Q ss_pred CCCcccCCCCCccCCccccccccChhhhcchhHHHH Q lcl|Aclame:pro 418 PKRPASTPVASLDQSPPASVPGLSPTNSDRSTDSGK 453 (518) Q Consensus 418 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 453 (518) .+.|... .....+.+-++.+++- T Consensus 503 iG~P~~d-------------d~~~~dati~s~~~~~ 525 (525) T protein:vir:10 503 IGSPKLD-------------DSDSSDATIESKERGV 525 (525) T ss_pred ccCCccC-------------CCcchhhhhhhhhcCC Confidence 1111100 0011111111111111 No 222 >protein:vir:94956 Length: 452 # NCBI annotation: putative phage structural protein # Family: family:all:584 # MgeID: mge:1538 # MgeName: Xp15 # Cross-refs: genbank:acc:YP_239276;genbank:gi:66392058;genbank:GeneID:5076601 Probab=94.21 E-value=0.0051 Score=33.17 Aligned_cols=379 Identities=11% Similarity=0.062 Sum_probs=155.3 Q ss_pred CCCCCCCccc---cccccchhhhhhhccCcc---CCc-ccC----ccchhhHHHHhh----hHHHHHHHHHHHHhhccCc Q lcl|Aclame:pro 3 LANGQTLSAP---AMAELSPQMQDSYYYAPA---VGM-QLE----RQFSLYGGIYKN----QPWVRTVIAKRAQALARLP 67 (518) Q Consensus 3 f~~~~~~~~~---~~~~~~~~~~~~~~~~~~---~~~-~~~----~~~~~~~~~~~~----~~~v~~~v~~ia~~ia~lp 67 (518) |. .+..-| +....-..+.+.++|... .|. .+. .....| ..++. .+++...++.++..+-+-| T Consensus 1 m~--V~~~hp~y~a~~~~W~~~rd~~~G~~~~r~~g~~YLpk~~~E~~~~Y-~~rl~rA~~~n~~~~t~~~~~G~vf~k~ 77 (452) T protein:vir:94 1 MP--IETKHPEYLAYENDWIDCRVASLGQREVKKKGVRFLPKLSGQTDDMY-NAYKQRALFYSITSKTLSALSGMVLDQP 77 (452) T ss_pred CC--CCCcCHHHHHHHHHHHHHHHHhcChHHHHcCCcccCCCCCCCCHHHH-HHHHhhccCCchHHHHHHHHhchhhcCC Confidence 11 111111 111111222333332211 010 011 111111 22222 3556666666666665555 Q ss_pred eEEEEecCCceeeecchHHHHHhhccCccCCHHHHHHHHHHHHHHcCCeeEEeeeCCCC-ceeeeeeeCCcceE------ Q lcl|Aclame:pro 68 VKCMFTSGDTETEEHDTGYAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQKNKSG-TPEKLMPMHPSRVA------ 140 (518) Q Consensus 68 ~~v~~~~~~~~~~~~~~~~~~l~~~PN~~~t~~~f~~~~~~~~ll~G~~~~~i~~~~~G-~~~~l~~l~p~~v~------ 140 (518) ..+ .... .+..++. -....+..+|.+.++...+.+|.+++++.+...| +|. +..+.|..|. T Consensus 78 p~~---------~~p~-~l~~~~~-D~~G~~L~~~~~~~~~~~l~~G~~~ilVD~p~~g~rPy-~~~~~~~~Ii~W~~~~ 145 (452) T protein:vir:94 78 PVI---------THPD-AMSKYFE-DQSGIQFYEVFTRAVEETLLMGRVGVFIDRPLTGGDPY-ISVYTTENILNWEEDE 145 (452) T ss_pred cee---------cccH-HHHHHHh-cccCCCHHHHHHHHHHHHHhcCeEEEEEeeccCCCceE-EEEechhhhcCccccc Confidence 543 1111 1222322 1346788999999999999999999999887665 332 2222222111 Q ss_pred -------------EEeccC---c--ceEEEEeec----------cCCCCceeE-------------EEeeeeeEEeecCC Q lcl|Aclame:pro 141 -------------IKRNSR---T--GRYEYYFQA----------GAGVGTQLV-------------SFADDEVVPIRFFN 179 (518) Q Consensus 141 -------------~~~~~~---~--~~~~~~~~~----------~~~~~~~~~-------------~~~~~~vih~~~~~ 179 (518) ...+.. + ....|++.. .....+... .+..-.++.+- .. T Consensus 146 ~g~l~~v~lre~~~~~d~~d~f~~~~~~~yRvL~l~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~IP~v~~~-~~ 224 (452) T protein:vir:94 146 DGRLLMVVLREFYTVRDTADRYVQNIRVRYRCLELVDGLLQITVHETQDGKVWELAKTSTIQNVGVTMDYIPFFCIT-PS 224 (452) T ss_pred cCCeeEEEEEEEEEEecCCCcccceeEEEEEEEEEeCCeEEEEEEEccCCceeeeccceeecCCCcccceeEEEEEc-CC Confidence 001110 0 011111100 000011000 01111223222 22 Q ss_pred CCcccccchHHHHHHHHHHHHHHHHHHHHHHHHccCCcceeeeeCCcCCHHHHHHHHHHHHHHhcCccccccceeccC-C Q lcl|Aclame:pro 180 PDGLERGLSLMESLKSTIFSEDSSRNATAAMWKNAGRPNLVLRHEKRLSPEAQQRLREQFDRAHAGSSNTGKTMVVEE-G 258 (518) Q Consensus 180 ~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~p~gil~~~~~~~~e~~~~~~~~~~~~~~g~~n~g~~~vl~~-g 258 (518) ..+...|.||+..++..-..+.....-....+...+.|-.+++--.... ...-|++ .++.+++ | T Consensus 225 ~~~~~~~~pPLl~LA~ln~~hy~~~sd~~~~l~~~~~P~l~~~g~~~~~------------~i~iG~~---~~~~lpe~~ 289 (452) T protein:vir:94 225 GLSMTPAKPPMIDIVDINYSHYRTSADLEHGRHFTGLPTPWITGAESQS------------TMHIGST---KAWVIPEVA 289 (452) T ss_pred CCCCCCCccchHHHHHHHHHHhcchhHHHHHHHHcccceeEeecCcCCC------------ceEeccc---ccccCCCCC Confidence 3345568999887765433333333334555666678876665332211 1233443 3466774 6 Q ss_pred cccc--cccCChhhHHHHHHHHHHHHHHHHHhccchHhhccccccccccHHH--HHHHHHHHHHHHHHHHHHHHHHhhhc Q lcl|Aclame:pro 259 MEPI--PLQLTAVEMQFIEARQLNREEVCGVYDIAPPIVHILDRATFSNISA--QMRAFYRDTMAIPIARIQSAMDKYVG 334 (518) Q Consensus 259 ~~~~--~~~~~~~d~q~~e~~~~~~~~Ia~~fgVpp~~lg~~~~~~~s~~e~--~~~~~~~~~l~P~~~~ie~~ln~~l~ 334 (518) .++. ..+.++-.+.. +..+...+++ ...|. .++-... ....+.++ ....-....|.-+...+++++++.|- T Consensus 290 ~~~~yie~~g~~i~~~~-~~l~~le~~m-~~~Ga--~ll~~~~-~~~~s~ea~~~~~~~~~s~L~~~a~~~e~al~~~l~ 364 (452) T protein:vir:94 290 AKVGFLEFTGQGLQSLE-KALSEKQAQL-ASLSA--RLIDNST-RGSEATETVKLRYMSETASLKSVTRAVEALLNKAYS 364 (452) T ss_pred CcceEEccCchhHHHHH-HHHHHHHHHH-HHHHH--HhhccCC-CcchHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHH Confidence 5544 44433333222 2222222222 11121 1221111 11112232 22333457777888888888876542 Q ss_pred ---chhhc--cceeeechhhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHHhCCCCCCccCceeeecccccccccccccC Q lcl|Aclame:pro 335 ---QYWVR--KNRMKFDIDDVIQPDWEAKSESTQKMVNSGVATPNEGREIMGLPRSDDPKADELYANSALQPLGATPDGA 409 (518) Q Consensus 335 ---~~~~~--~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~T~NE~R~~~g~~pi~~~~gD~~~~~~n~~~~~~~~~~~ 409 (518) ...+. ...++++.+-+.........+.+-+++..|.++....++.+..--+.++..+.-.+ ........ T Consensus 365 ~~a~w~g~~~~~~v~~n~dF~~~~~~~~~~~al~~~~~~G~is~~t~~~~L~~~gvl~~~~e~~~i------~~E~~~~~ 438 (452) T protein:vir:94 365 CIMDMESMGGTLNIKLNSAFLDSKLTAAELKAWVEAYLSGGISKEIYIHALKVGKVLPPPGESMGV------IPDPPAPE 438 (452) T ss_pred HHHHHcCCCCceEEEeccccccccCCHHHHHHHHHHHhcCCCcHHHHHHHHHhCCCCCCccCHHHH------HHHhhccC Confidence 11122 22344443333333223455556678999999999998888432222211111000 00000000 Q ss_pred CCCCCCCCCCCcccCC Q lcl|Aclame:pro 410 VEGEEAPAPKRPASTP 425 (518) Q Consensus 410 ~~~~~~~~~~~~~~~~ 425 (518) . .+.+.+.+++++. T Consensus 439 ~--~~~~~~~~~~~~~ 452 (452) T protein:vir:94 439 P--SPSNTPPNPSSKA 452 (452) T ss_pred c--ccCCCCCCCccCC Confidence 0 0011111111111 No 223 >protein:vir:102330 Length: 451 # NCBI annotation: putative portal protein # Family: family:all:125 # MgeID: mge:1566 # MgeName: phi CD119 # Cross-refs: genbank:acc:YP_529555;genbank:gi:90592641;genbank:GeneID:3974462 Probab=93.63 E-value=0.0069 Score=32.44 Aligned_cols=366 Identities=10% Similarity=0.032 Sum_probs=152.8 Q ss_pred CCCCCCCCCccccccccchhhhhhhccCccCCcccCccchhhHHHHhhhHHHHHHHHHHHHhhccCceEEEEecCCceee Q lcl|Aclame:pro 1 MLLANGQTLSAPAMAELSPQMQDSYYYAPAVGMQLERQFSLYGGIYKNQPWVRTVIAKRAQALARLPVKCMFTSGDTETE 80 (518) Q Consensus 1 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~v~~ia~~ia~lp~~v~~~~~~~~~~ 80 (518) -.-|+ .......... ... .......+ ..-..+.....+|+..+.-+-+-|..+...+++ T Consensus 26 YY~g~-~~i~~~~~~~--------~~~--~~~~~~~~------~~ki~~n~~~~Ivd~~~~yl~G~p~~~~~~~~~---- 84 (451) T protein:vir:10 26 YYYNK-NDILKKGVVV--------QNR--DENPLRNA------DNRISHNFHEILVDEKASYMFTYPVLFDIDNNK---- 84 (451) T ss_pred Hhccc-Cccccccccc--------ccc--cccccccc------ccccccchHHHHHHhhhhheecccceeecCCcH---- Confidence 00111 0000000000 000 00000000 001123566678888888887888766322111 Q ss_pred ecchHHHHHhhccCccCCHHHHHHHHHHHHHHcCCeeEEeeeCCCC-------ceeeeeeeCCcceEEEeccCc-ceEEE Q lcl|Aclame:pro 81 EHDTGYAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQKNKSG-------TPEKLMPMHPSRVAIKRNSRT-GRYEY 152 (518) Q Consensus 81 ~~~~~~~~l~~~PN~~~t~~~f~~~~~~~~ll~G~~~~~i~~~~~G-------~~~~l~~l~p~~v~~~~~~~~-~~~~~ 152 (518) .....+..++. | ........+..+++.+|.+|.++..+.+. ....+..++|..+.+++++.. +...+ T Consensus 85 ~~~~~~~~~~~--n---~~~~~~~~~~~~~~~~G~a~~~~y~de~~~~~~~~~~~~~~~~i~p~~~~~vydd~~~~~~~~ 159 (451) T protein:vir:10 85 ELNEKVTDVLG--N---EFTRKAKNLAIEASNCGSAWLHYWIDEEYSGEQVTNQTFKYGVVNTEEIIPIYRNGIERELEA 159 (451) T ss_pred HHHHHHHHHhc--c---CHHHHHHHHHHHHhhcCeEEEEEeecCCcccccccccceeEEEEcccceEEEEcCCCCCceEE Confidence 01111222221 2 34556666788899999999988776541 134467788888887765421 12111 Q ss_pred Ee---e-ccCCCC---c----eeEEEeeeeeEEeecCC---------------CC---------cccccchHHHHHHHHH Q lcl|Aclame:pro 153 YF---Q-AGAGVG---T----QLVSFADDEVVPIRFFN---------------PD---------GLERGLSLMESLKSTI 197 (518) Q Consensus 153 ~~---~-~~~~~~---~----~~~~~~~~~vih~~~~~---------------~~---------~~~~G~s~~~~~~~~i 197 (518) .+ . ..+..+ + ....+.+..+.+++... +. +...|.|-+......+ T Consensus 160 ~ir~~~~~~~~~~~~~~~~~~~~e~yt~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~vPvv~~~nn~~~~~d~e~v~~li 239 (451) T protein:vir:10 160 VIRYYIQLEDVKGQIQKQAYTYVEFWTDKILDKYKFFGVSCCGSQIEHITVQHRFNSVPFVEFSNNIKKQSDLSKYKKIL 239 (451) T ss_pred EEEEEEeeecccccccceEEEEEEEEeCCeEEEEEecccCccccccccccccCCCCeeeEEEeccCCCCCCchhhHHHHH Confidence 11 0 000000 0 00012222222222100 00 0123667777777777 Q ss_pred HHHHHHHHHHHHHHHccCCcceeeeeCC-cCCHHHHHHHHHHHHHHhcCccccccceecc-----CCcccccccCChhhH Q lcl|Aclame:pro 198 FSEDSSRNATAAMWKNAGRPNLVLRHEK-RLSPEAQQRLREQFDRAHAGSSNTGKTMVVE-----EGMEPIPLQLTAVEM 271 (518) Q Consensus 198 ~~~~~~~~~~~~~~~ng~~p~gil~~~~-~~~~e~~~~~~~~~~~~~~g~~n~g~~~vl~-----~g~~~~~~~~~~~d~ 271 (518) +....+..-..+.+...+.|-.+++.-. ..+.+... .+.. .+++.+. .|.+...++...... T Consensus 240 Da~~~~~S~~~~~~~~~~~~~l~~~g~~~~~~~~~~~----~~~~--------~~~i~~~~~~~~~~~~~~~l~~~~~~~ 307 (451) T protein:vir:10 240 DLYDRVMSGFANDLEDIQQIIYILENFGGEDTSEFLK----ELKR--------YKTIKTETDSEGDSGGLKTMQIEIPTE 307 (451) T ss_pred HHHHHHHHHHHHHHHHhccceeeeecCCcccchhhHH----HHhh--------CCeEEecCcCCccCCcceEEeecCCHH Confidence 6666555555666666666655544211 11222221 1111 1223332 122233333333445 Q ss_pred HHHHHHHHHHHHHHHHhccchHhhccccccccccHHHHHHHHHHHHHHHHHHHHHHHH-----------Hhhhcchhhcc Q lcl|Aclame:pro 272 QFIEARQLNREEVCGVYDIAPPIVHILDRATFSNISAQMRAFYRDTMAIPIARIQSAM-----------DKYVGQYWVRK 340 (518) Q Consensus 272 q~~e~~~~~~~~Ia~~fgVpp~~lg~~~~~~~s~~e~~~~~~~~~~l~P~~~~ie~~l-----------n~~l~~~~~~~ 340 (518) .+....+...+.|...-++|.. .... .+|.......+.-..+.-.+...+..+ ...+-.. .. T Consensus 308 ~~~~~~~~l~~~I~~~s~~p~~--~~~~---~gn~Sg~Alk~~~~~l~~k~~~k~~~f~~~l~~~~~li~~~~~~~--d~ 380 (451) T protein:vir:10 308 ARKIILEILKKQIYESGQGLQQ--DTEN---FGNASGVALKFFYRKLELKSGLLETEFRTSFDKLIKAILYFLGVT--DY 380 (451) T ss_pred HHHHHHHHHHHHHHHHhCcccc--cccc---cccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC--Cc Confidence 5666778888899999888842 1111 112222222222222211122211111 1111111 12 Q ss_pred ceeeechhhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHHhCCCCCCccCceeeecccccccccccccCCCCCCCCCCCC Q lcl|Aclame:pro 341 NRMKFDIDDVIQPDWEAKSESTQKMVNSGVATPNEGREIMGLPRSDDPKADELYANSALQPLGATPDGAVEGEEAPAPKR 420 (518) Q Consensus 341 ~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~T~NE~R~~~g~~pi~~~~gD~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ 420 (518) ..+++.+..-+..|..+.++.+.++. |+++..-+.+.++.- +++. +... -+.. +... .....+ T Consensus 381 ~~i~i~f~~~~p~n~~e~~~~~~kl~--g~iS~et~~~~~p~v--~d~~--~e~~-----~~~e--e~~~----~~~~~~ 443 (451) T protein:vir:10 381 KKIQQTYTRNMMSNDLEDADIATKSV--GIIPTKIILRHHPWV--DDVE--EAEK-----LYLE--EKKI----QASKVS 443 (451) T ss_pred cceeEEecCCCCCCHHHHHHHHHHHh--ccCchHHHHHhCCCC--CCHH--HHHH-----HHHH--HHHH----HHHHHH Confidence 33445556677889999999999885 788887777776442 2221 0000 0000 0000 000000 Q ss_pred cccCCCCCccC Q lcl|Aclame:pro 421 PASTPVASLDQ 431 (518) Q Consensus 421 ~~~~~~~~~~~ 431 (518) ...++-++ T Consensus 444 ---~~~~~~~~ 451 (451) T protein:vir:10 444 ---DDYNNFTE 451 (451) T ss_pred ---hhcCCCCC Confidence 00000000 No 224 >protein:vir:106999 Length: 564 # NCBI annotation: portal vertex protein gp20 # Family: family:all:1036 # MgeID: mge:1459 # MgeName: S-PM2 # Cross-refs: genbank:acc:YP_195138;genbank:gi:58532915;interpro:IPR010823;uniprot:Q5GQN4;genbank:GeneID:3260496 Probab=93.25 E-value=0.0082 Score=32.01 Aligned_cols=430 Identities=10% Similarity=0.087 Sum_probs=164.5 Q ss_pred CCCCCCCC---------CccccccccchhhhhhhccC--ccCCc-ccC---ccchhhHHHHhhhHHHHHHHHHHHHhhcc Q lcl|Aclame:pro 1 MLLANGQT---------LSAPAMAELSPQMQDSYYYA--PAVGM-QLE---RQFSLYGGIYKNQPWVRTVIAKRAQALAR 65 (518) Q Consensus 1 ~~f~~~~~---------~~~~~~~~~~~~~~~~~~~~--~~~~~-~~~---~~~~~~~~~~~~~~~v~~~v~~ia~~ia~ 65 (518) -|||-+-. ..+|........+...+.+. ...|. ... .....|+++ +.+|-|..||+-|.+.+.- T Consensus 3 ~lfgf~i~~~~~~~~~S~vpp~~~~~~~~i~~g~~g~~v~~~g~~~~~n~~eLI~~YR~m-a~~pEVd~Av~eIVneaIv 81 (564) T protein:vir:10 3 QLFGFLINEKEGQKGQSPVPPNDEASVSTVAGGYFGTYVDTSGGQNSRNEYELIRRYRDM-SLHPEVDSAIDEIVNEFVV 81 (564) T ss_pred chhcceeeeeccCCCCCcccCCcCCChhhhhccccceeeecccccchhhHHHHHHHHHHH-hhccchhhHHHHhhcceeE Confidence 56764322 11111111111221111111 00110 000 112334555 6889999999999887642 Q ss_pred -----CceEEEEecCCceee---ecchHHHHHhhccCccCCHHHHHHHHHHHHHHcCCeeEEeeeCCC---Cceeeeeee Q lcl|Aclame:pro 66 -----LPVKCMFTSGDTETE---EHDTGYAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQKNKS---GTPEKLMPM 134 (518) Q Consensus 66 -----lp~~v~~~~~~~~~~---~~~~~~~~l~~~PN~~~t~~~f~~~~~~~~ll~G~~~~~i~~~~~---G~~~~l~~l 134 (518) -|..|--.+-+-... .....+..++.--|-...++++ ++.|++.|..|..++-+.+ ..+.+|+.| T Consensus 82 ~d~~~~pV~vdL~~~~~s~siK~kI~eEF~~Il~ll~F~~~~~e~----fR~WYVDgRi~fHkiid~~~pk~GI~eLr~l 157 (564) T protein:vir:10 82 NDGDDKPVEVDLQNLEIGSGVKKKIRDEFNRILRMMNFNVNAHEI----IRNWYVDGRSHYHKVIDLDNPKKGILELRYI 157 (564) T ss_pred ecCCCceEEEEecccCcchHHHHHHHHHHHHHHHHhccchhhhHH----HhhhhhcceEEEEEEeeCCChhhhhhhhhhh Confidence 233332211110000 0111222233333344455554 4556789999988866532 248899999 Q ss_pred CCcceEEEeccC------cc---------------eEEEEeeccCCC-------------CceeEEEeeeeeEEeecC-- Q lcl|Aclame:pro 135 HPSRVAIKRNSR------TG---------------RYEYYFQAGAGV-------------GTQLVSFADDEVVPIRFF-- 178 (518) Q Consensus 135 ~p~~v~~~~~~~------~~---------------~~~~~~~~~~~~-------------~~~~~~~~~~~vih~~~~-- 178 (518) +|..++.++... +. .-+|.|...+.. .+..++++.+.|.|..-- T Consensus 158 DPr~i~~vr~i~~~~~~~~~~v~k~~~~~~~y~~~~Eyy~Ynp~~~~g~~~~~~~~~~~~~~~~ikI~~daI~y~hSGL~ 237 (564) T protein:vir:10 158 DSLKIRKVRQKLKDVDPNRKEIEKGTALQYDYGDFIEYYIYNPKGFAGNIPMVTGSMDWSNQEGIKIASDAIAQSTSGLM 237 (564) T ss_pred cccceeeeeeeccccccccceeeeeeeeeccccccccceeeccccccCcccccccccccccccceeechhhcceecccce Confidence 999887665211 11 112333222111 123467777777776532 Q ss_pred CCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHccCCcceeeeeCC-cCCHHHHHHHHHHHHHHhcC----ccccc--- Q lcl|Aclame:pro 179 NPDGLERGLSLMESLKSTIFSEDSSRNATAAMWKNAGRPNLVLRHEK-RLSPEAQQRLREQFDRAHAG----SSNTG--- 250 (518) Q Consensus 179 ~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~p~gil~~~~-~~~~e~~~~~~~~~~~~~~g----~~n~g--- 250 (518) +.++.. =+|-|..|...+....-++....-+==.-+.-+-|+.++- .+....+++..+.+-..|.. ....| T Consensus 238 d~~~~~-i~gyLhkAIKp~NQLkmlEDAlVIYRitRAPeRRvFYIDVGnLPk~KAeqYlr~iM~k~KNklVYDa~TGevr 316 (564) T protein:vir:10 238 DLNKKM-TLSFLHKAIKSLNQLRMIEDSLVIYRLSRAPERRIFYIDVGNLPKVKAEQYLRDVMSRYRNKLVYDGQTGEIR 316 (564) T ss_pred eCCCCc-eeccchhhhHhHHhhHHHHhhHHHHhhhccccceEEEEecCCCCchhHHHHHHHHHHhcCceEEEeccCceec Confidence 222322 3677888888777777776654433223333344554442 23333333333333333321 00111 Q ss_pred ---ccee-c-----c-----CCcccccccCChhhHHHHHHHHHHHHHHHHHhccchHhhccccc-cccccHHHHH--HHH Q lcl|Aclame:pro 251 ---KTMV-V-----E-----EGMEPIPLQLTAVEMQFIEARQLNREEVCGVYDIAPPIVHILDR-ATFSNISAQM--RAF 313 (518) Q Consensus 251 ---~~~v-l-----~-----~g~~~~~~~~~~~d~q~~e~~~~~~~~Ia~~fgVpp~~lg~~~~-~~~s~~e~~~--~~~ 313 (518) +.+- + + .|.+++.+.... .+.=++-.++..+.+.++++||.+-|...+. -+.+...+-. ..- T Consensus 317 ddrk~msMlEDyWLPRReGgrgTEItTLpGgq-nLgem~DV~YF~kKLY~aLnVP~SRl~~e~~~f~~Gr~~EItRDEiK 395 (564) T protein:vir:10 317 DDKKHMSMLEDFWLPRREGGRGTEITTLPGGQ-NLGELKDVEYFKKKLYNSLNLPPSRLTDDNKAFNLGKSTEILRDELK 395 (564) T ss_pred ccchhhhhHhhhcccccCCCcccceeeccccC-CcchHHHHHHHHHHHHHHhCCCcccccCCCceeecccccchhHHHHH Confidence 1111 1 1 234444443222 2222334556678899999999999875321 1211111111 111 Q ss_pred HHHHHHHHHHHHHHHHHh----hh-----cch--hh---ccceeeechhh----hhccC-HHHHHHHHHHHH--hCCCcC Q lcl|Aclame:pro 314 YRDTMAIPIARIQSAMDK----YV-----GQY--WV---RKNRMKFDIDD----VIQPD-WEAKSESTQKMV--NSGVAT 372 (518) Q Consensus 314 ~~~~l~P~~~~ie~~ln~----~l-----~~~--~~---~~~~~~fd~~~----l~~~d-~~~~~~~~~~~~--~~g~~T 372 (518) ...-|.-+..++...+.. .| ++. +. ....+.|..+. +.... ...|...+..+- -.-.++ T Consensus 396 F~KFI~RLR~rFs~lF~~~Lk~qLiLKgiit~eeW~~i~~~I~~~f~~Dn~f~ElKe~Eil~~Rl~~l~~~dpyvGky~S 475 (564) T protein:vir:10 396 FTKFIGRLRKRFAQLFHDILKTQLILKGIITPEDWDDMEEHIQYDFLFDNHFNELKEQEMQLQRVNLATQMDPFVGKYFS 475 (564) T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhccCCCHHHHHHHhhcceEEeeecchHHHHHHHHHHHHHHHHHHHhhhhhccccc Confidence 122233333444433333 22 121 11 12233333222 11111 122333333220 011233 Q ss_pred HHHHHHH-Hh----------------------CCCCCCccCceeeec-ccccccccccccCCCCCCCCCCCCcccCCCCC Q lcl|Aclame:pro 373 PNEGREI-MG----------------------LPRSDDPKADELYAN-SALQPLGATPDGAVEGEEAPAPKRPASTPVAS 428 (518) Q Consensus 373 ~NE~R~~-~g----------------------~~pi~~~~gD~~~~~-~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 428 (518) .+=+|+. |. .+|.+...||..-++ ..+.|..+...+....++.... T Consensus 476 ~dyi~k~ILr~tDeei~~~~kqI~~E~k~~~~~~P~e~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~---------- 545 (564) T protein:vir:10 476 TEYIRRKILMQTENEFKEIDKQMKSDIESGLAIDPIQVNMLDDMEKQNQAFAPELQAAQDDLAAEREIKK---------- 545 (564) T ss_pred hHHHHHHHhccCHHHHHHHHHHHHHHhhcCCCCCchhhhcCCCccCCCCcCCcchhhhccccccccChhh---------- Confidence 3333221 11 123222233311111 1111211111110000000000 Q ss_pred ccCCccccccccChhhhcc Q lcl|Aclame:pro 429 LDQSPPASVPGLSPTNSDR 447 (518) Q Consensus 429 ~~~~~~~~~~~~~~~~~~~ 447 (518) .+..+.+.........+.+ T Consensus 546 ~~~a~~~~~~~~~~~~~~~ 564 (564) T protein:vir:10 546 LNSAPKPPPSQQSKSQSNK 564 (564) T ss_pred hccCCCCCCCCCCcCcCCC Confidence 0000000000000000000 No 225 >protein:vir:3361 Length: 535 # NCBI annotation: head-to-tail joining protein # Family: family:all:481 # MgeID: mge:67 # MgeName: T3 # Cross-refs: genbank:acc:NP_523332;genbank:gi:17570823;genbank:GeneID:927409 Probab=93.21 E-value=0.0084 Score=31.97 Aligned_cols=400 Identities=10% Similarity=0.024 Sum_probs=139.8 Q ss_pred CCCCCCCCCccccccccchhhhhhhccCccCCcccCccchhhHHHHhhhHHHHHHHHHHHHhhc-cCceEEEEecCCcee Q lcl|Aclame:pro 1 MLLANGQTLSAPAMAELSPQMQDSYYYAPAVGMQLERQFSLYGGIYKNQPWVRTVIAKRAQALA-RLPVKCMFTSGDTET 79 (518) Q Consensus 1 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~v~~ia~~ia-~lp~~v~~~~~~~~~ 79 (518) .+|.+....... .... . +..+. .-++......+...+. .-||.=....+.... T Consensus 42 ~~~~~~~~~~~~--~~~~-----~--------------~dst~-----~~a~~~Laa~l~~~ltP~~~WF~l~~~d~~~~ 95 (535) T protein:vir:33 42 SLFPKESDNEST--DYTT-----P--------------WQAVG-----ARGLNNLASKLMLALFPMQSWMKLTISEYEAK 95 (535) T ss_pred cccCCCCCcccc--cccc-----c--------------ccccH-----HHHHHHHHHHHHHhhcCCCcccccccChHHHh Confidence 444332111110 0000 0 00000 0133333333333332 123322111110000 Q ss_pred ----------eec------chHHHHHhhccCccCCHHHHHHHHHHHHHHcCCeeEEeeeCCCC-ceeeeeeeCCcceEEE Q lcl|Aclame:pro 80 ----------EEH------DTGYAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQKNKSG-TPEKLMPMHPSRVAIK 142 (518) Q Consensus 80 ----------~~~------~~~~~~l~~~PN~~~t~~~f~~~~~~~~ll~G~~~~~i~~~~~G-~~~~l~~l~p~~v~~~ 142 (518) +.. .+.++..+.+- +++.=+..+..+++.+||+.+++..+..+ .....+|+ .++.+. T Consensus 96 ~~~~~~~~~~~v~~~l~~ve~~~~~~~~~s----nf~~~~~~~~~~L~~~G~a~l~~~~~~~~~~~f~~~pl--~~~~v~ 169 (535) T protein:vir:33 96 QLVGDPDGLAKVDEGLSMVERIIMNYIESN----SYRVTLFECLKQLIVAGNALLYLPEPEGSYNPMKLYRL--SSYVVQ 169 (535) T ss_pred ccccCcchHHHHHHHHHHHHHHHHHHHHhc----CcHHHHHHHHHHHHhhCceeEEeecCCCCceeeEEEEc--CeeEEe Confidence 000 01122223333 34444556677888999999887665432 22334443 445555 Q ss_pred eccCcceE-----------------------------------EEEeeccCCCCcee-----------------EEEeee Q lcl|Aclame:pro 143 RNSRTGRY-----------------------------------EYYFQAGAGVGTQL-----------------VSFADD 170 (518) Q Consensus 143 ~~~~~~~~-----------------------------------~~~~~~~~~~~~~~-----------------~~~~~~ 170 (518) .+..|... .|........++.. ..|... T Consensus 170 ~d~~G~vd~i~r~~~~t~~ql~~~~~~~~~~~~~~k~~~~~~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (535) T protein:vir:33 170 RDAYGNVLQIVTRDQIAFGALPEDVRSAVEKSGGEKKMDEMVDVYTHVYLDEESGDYLKYEEVEDVEIDGSDATYPTDAM 249 (535) T ss_pred eCCCCCeeEEEeeEeecHHHHHHHhhhhhcccccccccccCCeEEEEEEeeCCCCcEEEEEEEeCccccccccccccccC Confidence 55444221 11100000000000 012222 Q ss_pred eeEEeecCCCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHccCCcceeeeeCCcCCHHHHHHHHHHHHHHhcCccccc Q lcl|Aclame:pro 171 EVVPIRFFNPDGLERGLSLMESLKSTIFSEDSSRNATAAMWKNAGRPNLVLRHEKRLSPEAQQRLREQFDRAHAGSSNTG 250 (518) Q Consensus 171 ~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~p~gil~~~~~~~~e~~~~~~~~~~~~~~g~~n~g 250 (518) ..+..|....++..||.||.+-+...+.....+.+...........|.+++.-.....+..+ ..|.. T Consensus 250 P~i~~Rw~~~~ge~YGrgp~~~~l~D~k~L~~l~~~~l~~~~~~~~p~~lv~~~g~~~~~~~----------~~~~~--- 316 (535) T protein:vir:33 250 PYIPVRMVRIDGESYGRSYCEEYLGDLRSLENLQEAIVKMSMISAKVIGLVNPAGITQPRRL----------TKAQT--- 316 (535) T ss_pred CceeeeeeecCCCccccchHHHHHHHHHHHHHHHHHHHHHHHHHhcCceeeccccccchhhc----------ccCCc--- Confidence 34556666667788999999999999999999999999999998888866543333333221 11111 Q ss_pred ccee--ccCCcccccccCChhhHHHHHHHHHHHHHHHHHhccchHhhccccccccccHHH--HHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 251 KTMV--VEEGMEPIPLQLTAVEMQFIEARQLNREEVCGVYDIAPPIVHILDRATFSNISA--QMRAFYRDTMAIPIARIQ 326 (518) Q Consensus 251 ~~~v--l~~g~~~~~~~~~~~d~q~~e~~~~~~~~Ia~~fgVpp~~lg~~~~~~~s~~e~--~~~~~~~~~l~P~~~~ie 326 (518) +.++ ..+++...++...++=.-..+..+.....|-.+|-+.. +...+. ..-+.++ ....-....|.|.+.+++ T Consensus 317 g~~v~g~~~~v~~~~~~~~~~~~~~~~~i~~~~~~I~~af~~~~--~~~~~~-~r~TAtEV~~r~~E~~~~LG~v~~rl~ 393 (535) T protein:vir:33 317 GDFVPGRREDIDFLQLEKQADFTVAKAVSDQIEARLSYAFMLNS--AVQRTG-ERVTAEEIRYVASELEDTLGGVYSILS 393 (535) T ss_pred eeeecCCcccceeeecccccchhHHHHHHHHHHHHHHHHHhhhh--cccCCC-ccccHHHHHHHHHHHHHHHhHHHHHHH Confidence 1122 22344444444433222234555666788888885442 211111 1112222 222333334445444444 Q ss_pred HH------------HHhh-hcchhh-ccceeeechhhhhcc----CHHHHHHHHHHHHhCCCcCHHHHHH-HHhCCCCCC Q lcl|Aclame:pro 327 SA------------MDKY-VGQYWV-RKNRMKFDIDDVIQP----DWEAKSESTQKMVNSGVATPNEGRE-IMGLPRSDD 387 (518) Q Consensus 327 ~~------------ln~~-l~~~~~-~~~~~~fd~~~l~~~----d~~~~~~~~~~~~~~g~~T~NE~R~-~~g~~pi~~ 387 (518) ++ +.+. +++... ..+.++|- +.|... +......++..+.. +.| |+.. .++.+.+-+ T Consensus 394 ~Ell~Pli~r~~~il~r~g~lP~~p~~~v~~~yi-s~La~aqr~~~~~~l~~~~~~la~---~~P-~~~d~~id~d~~~~ 468 (535) T protein:vir:33 394 QELQLPLVRVLLKQLQATSQIPELPKEAVEPTIS-TGLEAIGRGQDLDKLERCISAWAA---LAP-MQGDPDINLAVIKL 468 (535) T ss_pred HHHHHHHHHHHHHHHHhcCCCCCCCccceeEEEe-cHHHHHHHHHHHHHHHHHHHHHHh---hCh-hhhhccCCHHHHHH Confidence 44 3222 333322 22333331 222111 11111111111110 111 0000 011000000 Q ss_pred ccCceeeec-ccccccccccccCCCCCCCCCCCCcccCCCCCccCCccccccccChhhhcchhHHHHHHHHHHhhccCcc Q lcl|Aclame:pro 388 PKADELYAN-SALQPLGATPDGAVEGEEAPAPKRPASTPVASLDQSPPASVPGLSPTNSDRSTDSGKTEPRRLMQKPPPK 466 (518) Q Consensus 388 ~~gD~~~~~-~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~ 466 (518) .-++.+-+| ..++.-. ++..+...+... ..............++. ..+ T Consensus 469 ~~a~~~Gvp~~~i~~~~---------------------------ee~~~~~~q~~~---~~~~~~~~~~~g~~~~~-~~~ 517 (535) T protein:vir:33 469 RIANAIGIDTSGILLTD---------------------------EQKQALMMQDAA---QTGVENAAAAGGAGVGA-LAT 517 (535) T ss_pred HHHHHcCCCHhHhcCCH---------------------------HHHHHHHHHHHH---HHHHHHHHHhhhhhhcc-hhh Confidence 000000000 0000000 000000000000 00000000000000000 001 Q ss_pred hhHHHHHHHHHHHhhhhhh Q lcl|Aclame:pro 467 ESSPKHLRAVKGAMGRGKD 485 (518) Q Consensus 467 ~~~~~~~~~~~~~~~~~~~ 485 (518) +.-+.- +...++-|-.-. T Consensus 518 ~~~~~~-~~~~~~~g~~~~ 535 (535) T protein:vir:33 518 SSPEAM-QGAAAKAGLNAT 535 (535) T ss_pred cCChhH-HHHHHhccCCCC Confidence 111111 111122222111 No 226 >protein:vir:1538 Length: 535 # NCBI annotation: head-to-tail joining protein # Family: family:all:481 # MgeID: mge:31 # MgeName: phiYeO3-12 # Cross-refs: genbank:acc:NP_052106;swissprot:trembl:q9t110;genbank:gi:9634032;uniprot:Q9T110;genbank:GeneID:1262384 Probab=92.95 E-value=0.0093 Score=31.71 Aligned_cols=402 Identities=10% Similarity=0.022 Sum_probs=139.3 Q ss_pred CCCCCCCCCccccccccchhhhhhhccCccCCcccCccchhhHHHHhhhHHHHHHHHHHHHhhc-cCceEEEEecCCcee Q lcl|Aclame:pro 1 MLLANGQTLSAPAMAELSPQMQDSYYYAPAVGMQLERQFSLYGGIYKNQPWVRTVIAKRAQALA-RLPVKCMFTSGDTET 79 (518) Q Consensus 1 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~v~~ia~~ia-~lp~~v~~~~~~~~~ 79 (518) .+|.+....... ... +.+..+. .-++......+...+. .-||.=....+.... T Consensus 42 ~~~~~~~~~~~~--~~~-------------------~~~dst~-----~~a~~~Laa~l~~~ltP~~~WF~l~~~d~~~~ 95 (535) T protein:vir:15 42 SLFPKESDNEST--DYT-------------------TPWQAVG-----ARGLNNLASKLMLALFPMQSWMKLTISEYEAK 95 (535) T ss_pred cccCCCCCcccc--ccc-------------------ccccccH-----HHHHHHHHHHHHHhhcCCCcccccccChHHHh Confidence 444332111110 000 0000000 0133333333333332 123332211110000 Q ss_pred ----------eec------chHHHHHhhccCccCCHHHHHHHHHHHHHHcCCeeEEeeeCCCC-ceeeeeeeCCcceEEE Q lcl|Aclame:pro 80 ----------EEH------DTGYAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQKNKSG-TPEKLMPMHPSRVAIK 142 (518) Q Consensus 80 ----------~~~------~~~~~~l~~~PN~~~t~~~f~~~~~~~~ll~G~~~~~i~~~~~G-~~~~l~~l~p~~v~~~ 142 (518) +.. .+.++..+.+- +++.=+..+..+++.+||+.+++..+..+ .....||+ .++.+. T Consensus 96 ~~~~~~~~~~~v~~~L~~ve~~~~~~l~~s----nf~~~~~~~~~~L~~~G~a~l~~~~~~~~~~~f~~~pl--~~~~v~ 169 (535) T protein:vir:15 96 QLVGDPDGLAKVDEGLSMVERIIMNYIESN----SYRVTLFECLKQLIVAGNALLYLPEPEGSYNPMKLYRL--SSYVVQ 169 (535) T ss_pred ccCCCcchHHHHHHHHHHHHHHHHHHHHhc----CcHHHHHHHHHHHHhhCceeEEeecCCCCceeeEEEEc--CeeEEe Confidence 000 01122223332 34445556678888999998887655433 22344444 344444 Q ss_pred eccCcceE-----------------------------------EEEeeccCCCCc-----------------eeEEEeee Q lcl|Aclame:pro 143 RNSRTGRY-----------------------------------EYYFQAGAGVGT-----------------QLVSFADD 170 (518) Q Consensus 143 ~~~~~~~~-----------------------------------~~~~~~~~~~~~-----------------~~~~~~~~ 170 (518) .+..|... .|........++ ....|... T Consensus 170 ~d~~G~vd~i~r~~~~t~~~l~~~~~~~~~~~~~~~~~~~~v~v~~~v~~~~~~~~~~~~~e~~g~~~~~~~~~~~~~~~ 249 (535) T protein:vir:15 170 RDAYGNVLQIVTRDQIAFGALPEDVRSAVEKAGGEKKMDEMVDVYTHVYLDEESGDYLKYEEVEDVEIDGSDATYPTDAM 249 (535) T ss_pred eCCCCCeeEEEEeEeecHHHHHHHHhHhhhccccccCCCCceeEEEEEEEecCCCcEEEEEEeeCccccccccccccccC Confidence 44433211 111000000000 00012223 Q ss_pred eeEEeecCCCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHccCCcceeeeeCCcCCHHHHHHHHHHHHHHhcCccccc Q lcl|Aclame:pro 171 EVVPIRFFNPDGLERGLSLMESLKSTIFSEDSSRNATAAMWKNAGRPNLVLRHEKRLSPEAQQRLREQFDRAHAGSSNTG 250 (518) Q Consensus 171 ~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~p~gil~~~~~~~~e~~~~~~~~~~~~~~g~~n~g 250 (518) ..+..|....++..||.||.+-+...+.....+.+...........|.+++.-.....+... ..+..+. T Consensus 250 P~i~~Rw~~~~ge~YGrgp~~~~l~D~k~L~~l~~~~l~~~~~~~~p~~lv~~~g~~~~~~l----------~~~~~g~- 318 (535) T protein:vir:15 250 PYIPVRMVRIDGESYGRSYCEEYLGDLRSLENLQEAIVKMSMISAKVIGLVNPAGITQPRRL----------TKAQTGD- 318 (535) T ss_pred CceeeeeeecCCCccccchHHHHHHHHHHHHHHHHHHHHHHHHHhcCceeecccccccchhc----------ccCCcee- Confidence 34556666667788999999999999999999999999999998888866543333333221 1111111 Q ss_pred cceeccCCcccccccCChhhHHHHHHHHHHHHHHHHHhccchHhhccccccccccHHH--HHHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 251 KTMVVEEGMEPIPLQLTAVEMQFIEARQLNREEVCGVYDIAPPIVHILDRATFSNISA--QMRAFYRDTMAIPIARIQSA 328 (518) Q Consensus 251 ~~~vl~~g~~~~~~~~~~~d~q~~e~~~~~~~~Ia~~fgVpp~~lg~~~~~~~s~~e~--~~~~~~~~~l~P~~~~ie~~ 328 (518) -+.-..+++...++...++=.-..+..+.....|-.+|-+.. +...+. ..-+.++ ....-....|.|.+.+++++ T Consensus 319 ~v~g~~~~v~~~~~~~~~~~~~~~~~i~~~~~~I~~af~~~~--~~~~~~-~r~TAtEV~~r~~E~~~~LG~v~~rl~~E 395 (535) T protein:vir:15 319 FVPGRREDIDFLQLEKQADFTVAKAVSDQIEARLSYAFMLNS--AVQRTG-ERVTAEEIRYVASELEDTLGGVYSILSQE 395 (535) T ss_pred eecCCcccceeeecccccchhHHHHHHHHHHHHHHHHHhhhh--cccCCC-ccccHHHHHHHHHHHHHHHhHHHHHHHHH Confidence 011122344444444433222234555666788888884442 211111 1112222 22233333444544444444 Q ss_pred ------------HHhh-hcchhh-ccceeeechhhhhc----cCHHHHHHHHHHHHhCCCcCHHHHHH-HHhCCCCCCcc Q lcl|Aclame:pro 329 ------------MDKY-VGQYWV-RKNRMKFDIDDVIQ----PDWEAKSESTQKMVNSGVATPNEGRE-IMGLPRSDDPK 389 (518) Q Consensus 329 ------------ln~~-l~~~~~-~~~~~~fd~~~l~~----~d~~~~~~~~~~~~~~g~~T~NE~R~-~~g~~pi~~~~ 389 (518) +.+. +++... ..+.++|- +.|-. .+......++..+.. +.| |+.. .++.+.+-+.- T Consensus 396 ll~Pli~r~~~il~r~g~lP~~p~~~v~~~yi-s~La~aqr~~~~~~l~~~~~~la~---~~P-~~ld~~id~d~~~~~~ 470 (535) T protein:vir:15 396 LQLPLVRVLLKQLQATSQIPELPKEAVEPTIS-TGLEAIGRGQDLDKLERCISAWAA---LAP-MQGDPDINLAVIKLRI 470 (535) T ss_pred HHHHHHHHHHHHHHhcCCCCCCCccceeEEEe-cHHHHHHHHHHHHHHHHHHHHHHh---cCh-hhhhccCCHHHHHHHH Confidence 3322 333322 22233331 22211 111111111111110 111 0000 01000000000 Q ss_pred Cceeeec-ccccccccccccCCCCCCCCCCCCcccCCCCCccCCccccccccChhhhcchhHHHHHHHHHHhhccCcchh Q lcl|Aclame:pro 390 ADELYAN-SALQPLGATPDGAVEGEEAPAPKRPASTPVASLDQSPPASVPGLSPTNSDRSTDSGKTEPRRLMQKPPPKES 468 (518) Q Consensus 390 gD~~~~~-~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~ 468 (518) ++.+-+| ..++.-. ++..+...+... ..............++++..+ T Consensus 471 a~~~Gvp~~~i~~~~---------------------------eev~~~~~q~~~---~~~~~~~a~~~g~~~~~~~~~-- 518 (535) T protein:vir:15 471 ANAIGIDTSGILLTD---------------------------EQKQALMMQDAA---QTGIENAAATGGAGVGALATS-- 518 (535) T ss_pred HHHcCCChhhhcCCH---------------------------HHHHHHHHHHHH---HHHHHHHHHHHHhhccchhcc-- Confidence 0000000 0000000 000000000000 000000000000001111000 Q ss_pred HHHHHHHHHHHhhhhhhhcccccc Q lcl|Aclame:pro 469 SPKHLRAVKGAMGRGKDIKGFALQ 492 (518) Q Consensus 469 ~~~~~~~~~~~~~~~~~~~~~~~~ 492 (518) .+.-...+..+-|-. . . T Consensus 519 ~p~~~~~~~~~~g~~----~---~ 535 (535) T protein:vir:15 519 SPEAMQGAAAQAGLD----A---T 535 (535) T ss_pred ChHHHHHHHhccCCC----C---C Confidence 010001111111111 1 1 No 227 >protein:vir:104892 Length: 558 # NCBI annotation: T4-like capsid assembly protein # Family: family:all:1036 # MgeID: mge:1630 # MgeName: P-SSM2 # Cross-refs: genbank:acc:YP_214363;genbank:gi:61806003;genbank:GeneID:3294412 Probab=92.87 E-value=0.0097 Score=31.63 Aligned_cols=439 Identities=10% Similarity=0.107 Sum_probs=166.1 Q ss_pred CCCCCCCCCccc-cccccch---hhhh---hhccCccCCcccC---------ccchhhHHHHhhhHHHHHHHHHHHHhhc Q lcl|Aclame:pro 1 MLLANGQTLSAP-AMAELSP---QMQD---SYYYAPAVGMQLE---------RQFSLYGGIYKNQPWVRTVIAKRAQALA 64 (518) Q Consensus 1 ~~f~~~~~~~~~-~~~~~~~---~~~~---~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~v~~~v~~ia~~ia 64 (518) -+||-+-....+ .....++ -..+ .+..+...+..+. .....|+++ +.+|-|..||+-|.+.+. T Consensus 3 ~lfgf~~~~~~~~~~~~~s~~~p~~ddg~~~~~~~g~~~~~~~~~~~~~~~~eLI~~YR~m-a~~pEvd~Av~eIVneai 81 (558) T protein:vir:10 3 KLFGFSIEETQKKSTSIISPVPKNNEDGVDNFISSGFYGQYVDIEGAYRSEYDLIRRYREM-ALHPEADGAIEDVVNEAI 81 (558) T ss_pred chhcchhhhhhhhccCCccccCCCccccccceeccceeeeeecccchhhhHHHHHHHHHHH-hhccchhhHHHHhhccee Confidence 466654321100 0000011 0000 0101111111111 112234554 688999999999998875 Q ss_pred c-----CceEEEEecCCcee---eecchHHHHHhhccCccCCHHHHHHHHHHHHHHcCCeeEEeeeCCC---Cceeeeee Q lcl|Aclame:pro 65 R-----LPVKCMFTSGDTET---EEHDTGYAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQKNKS---GTPEKLMP 133 (518) Q Consensus 65 ~-----lp~~v~~~~~~~~~---~~~~~~~~~l~~~PN~~~t~~~f~~~~~~~~ll~G~~~~~i~~~~~---G~~~~l~~ 133 (518) - -|..|--.+-+... ......+..++.--+-...++++ ++.|++.|..|..++-+.+ ..+.+|+. T Consensus 82 v~d~~~~pV~i~Ld~~~~s~~iK~kI~eEF~~Il~ll~F~~~~~e~----fR~WYVDgRiyfHKiid~k~pk~GI~ELr~ 157 (558) T protein:vir:10 82 VSDLYDSPVEVELSNLNASNTLKKKIREEFRYIKEMMDFDKKSHEI----FRNWYVDGRVFYLKVIDTKNPQEGIQDLRY 157 (558) T ss_pred EecCCCceEEEEecccCcchHHHHHHHHHHHHHHHHhccchhhhHH----HhhheeeeEEEEEEEEeCCCccccceeeee Confidence 3 23333222211111 11111222233333344445554 4556789999998876533 35899999 Q ss_pred eCCcceEEEecc----------------C------cceEEEEeeccCC---------CCceeEEEeeeeeEEeecCC--- Q lcl|Aclame:pro 134 MHPSRVAIKRNS----------------R------TGRYEYYFQAGAG---------VGTQLVSFADDEVVPIRFFN--- 179 (518) Q Consensus 134 l~p~~v~~~~~~----------------~------~~~~~~~~~~~~~---------~~~~~~~~~~~~vih~~~~~--- 179 (518) |+|..++.++.- . +...+|.|...+. ..+..++++.+-| ++-+.. T Consensus 158 lDPr~i~~Vr~i~~~~~~~~~~~~~~~~~~~~~~~~~~eyy~Y~~~~~~~~~~~~~~~~~~~vkI~~dAI-~y~hSGL~d 236 (558) T protein:vir:10 158 IDPLKIKFIRQEKRKPGNQDPAIRVRSEQDVVPNPEFEEFYIYTPKVQHPTGMVGQMGGKNSIKIAKDSI-TMCTSGLVD 236 (558) T ss_pred eCcccceeeeeeccccccccceeeeecccceeeccceeEeeeecCCcccccccceeecCCCceeechhhe-eeeccccee Confidence 999999765442 0 1112333322211 1223345544444 333221 Q ss_pred CCcccccchHHHHHHHHHHHHHHHHHHHHHHHHccCCcceeeeeCC-cCCHHHHHHHHHHHHHHhcC----ccccc---- Q lcl|Aclame:pro 180 PDGLERGLSLMESLKSTIFSEDSSRNATAAMWKNAGRPNLVLRHEK-RLSPEAQQRLREQFDRAHAG----SSNTG---- 250 (518) Q Consensus 180 ~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~p~gil~~~~-~~~~e~~~~~~~~~~~~~~g----~~n~g---- 250 (518) .++. .=+|-|..|...+....-++...--+==.-+.-+-|+.++- .+.+..+++..+.+-..|.. ....| T Consensus 237 ~~~~-~i~syLhkAIKp~NQLkmlEDAlVIYRitRAPERRvFYIDVGnLPk~KAeqYlr~iM~k~KNklVYDa~TGev~d 315 (558) T protein:vir:10 237 RNKN-RVLSYLHKAIKALNQLRMIEDSLVIYRLSRAPERRIFYIDVGNLPKVKAEQYLKEVMSRYRNKLVYDANTGEVRD 315 (558) T ss_pred cCCC-eeeecchHhhHhHHhhHHHHhhHHHHhhhccccceEEEEecCCCCchhHHHHHHHHHHhccceEEEeccCceecc Confidence 1222 23677888887777777666654433223333344554442 23333333333333333221 00111 Q ss_pred --ccee-c-----c-----CCcccccccCChhhHHHHHHHHHHHHHHHHHhccchHhhccccccccccHHHHHH--HHHH Q lcl|Aclame:pro 251 --KTMV-V-----E-----EGMEPIPLQLTAVEMQFIEARQLNREEVCGVYDIAPPIVHILDRATFSNISAQMR--AFYR 315 (518) Q Consensus 251 --~~~v-l-----~-----~g~~~~~~~~~~~d~q~~e~~~~~~~~Ia~~fgVpp~~lg~~~~~~~s~~e~~~~--~~~~ 315 (518) +.+- + + .|.+++.+.... .+.=++-.++..+.+.++++||.+-|+..+.-+.....+-.+ .-.. T Consensus 316 drk~msMlEDyWLpRReGgrgTEItTLpGgq-nLgem~DV~YF~kKLy~aLnVP~SRl~~e~~f~~Gr~~EItRDEiKF~ 394 (558) T protein:vir:10 316 DRKFMSMMEDFWLPRREGGRGTEITTLPGGQ-NLGELSDVDYFQKKLYRALGVPESRIAAEGGFNLGRSSEILRDELKFA 394 (558) T ss_pred cchhhhhHhhhcccccCCCCccceeeccccC-CcchHHHHHHHHHHHHHHhCCCccccCCCCcccccccchhhHHHHHHH Confidence 1111 1 1 234444443222 222233455667889999999999987543333322222211 1111 Q ss_pred HHHHHHHHHHHHHHHhhh---------cch--hh---ccceeeechhh----hhccC-HHHHHHHHHHHHh--CCCcCHH Q lcl|Aclame:pro 316 DTMAIPIARIQSAMDKYV---------GQY--WV---RKNRMKFDIDD----VIQPD-WEAKSESTQKMVN--SGVATPN 374 (518) Q Consensus 316 ~~l~P~~~~ie~~ln~~l---------~~~--~~---~~~~~~fd~~~----l~~~d-~~~~~~~~~~~~~--~g~~T~N 374 (518) .-|.-+..++...+...| ++. +. ....+.|..+. +.... ...|...+..+-. .-.++.+ T Consensus 395 KFI~RLR~rFs~lF~~~Lk~qLilKgiit~eeW~~i~~~I~~~f~~Dn~f~ElKe~Eil~~Rl~~l~~~dpyvGky~S~d 474 (558) T protein:vir:10 395 KFVGRLRKRFAAMFNDMLKTQLVLKNIVTPEDWKTMEDHIQYDFLYDNQFAELKESELMEGRLGMLATIEPYIGKYYSTE 474 (558) T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhccCCCHHHHHHHhhcceEEeeecchHHHHHHHHHHHHHHHHHHHhhhhhccccchH Confidence 223333444443333322 121 11 12233333222 11111 1223333333211 1133444 Q ss_pred HHHHH-HhCCC---------CCCccCceeee-cccccccccccccCCCCCCCCCCCCcccCCCCCccCCccccccccChh Q lcl|Aclame:pro 375 EGREI-MGLPR---------SDDPKADELYA-NSALQPLGATPDGAVEGEEAPAPKRPASTPVASLDQSPPASVPGLSPT 443 (518) Q Consensus 375 E~R~~-~g~~p---------i~~~~gD~~~~-~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 443 (518) =+|+. |.+.- ++.+-.+-++. |...-|+.. +.- ++.+++.-...+....++ ..+..+. T Consensus 475 yi~k~ILr~tDeeI~~~~kqI~~E~k~~~~~~p~~~~~~~~---~~~-----~~~~~~~~~~~~~~~~~~---~~~~~~~ 543 (558) T protein:vir:10 475 YVRKRVLRQTDMEIEEIDTQIEDEIQKGIIPDPSQIDPITG---EPL-----PQEGDPAMEGMGEQPVDP---DLEAQAQ 543 (558) T ss_pred HHHHHHhccCHHHHHHHHHHHHHHHhCCCCCCccccChhhc---ccc-----CccCCchhccCCCCCccc---ccccchh Confidence 34332 22211 01001111111 111111110 000 000000000000011111 1111111 Q ss_pred hhcchhHHHHHHHHH Q lcl|Aclame:pro 444 NSDRSTDSGKTEPRR 458 (518) Q Consensus 444 ~~~~~~~~~~~~~~~ 458 (518) +.+...++.-.+++. T Consensus 544 ~~~~~~~~~~~~~~~ 558 (558) T protein:vir:10 544 AVDAQYSKDTKKAEL 558 (558) T ss_pred hhhhhhhhhhhhhcC Confidence 222222232222222 No 228 >protein:vir:97265 Length: 513 # NCBI annotation: hypothetical protein ORF013 # Family: family:all:584 # MgeID: mge:1657 # MgeName: M6 # Cross-refs: genbank:acc:YP_001294521;genbank:gi:149408242;genbank:GeneID:5237130 Probab=92.71 E-value=0.01 Score=31.48 Aligned_cols=408 Identities=11% Similarity=-0.009 Sum_probs=152.7 Q ss_pred CCCCCCCCCccccccccchhhhhhhccCcc---CCc-ccC----cc---chhhHHHHhhhHHHHHHHHHHHHhhccCceE Q lcl|Aclame:pro 1 MLLANGQTLSAPAMAELSPQMQDSYYYAPA---VGM-QLE----RQ---FSLYGGIYKNQPWVRTVIAKRAQALARLPVK 69 (518) Q Consensus 1 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-~~~----~~---~~~~~~~~~~~~~v~~~v~~ia~~ia~lp~~ 69 (518) ++..+.+.=. ++...-..+.+.++|... .|. .+. .. +..+...+.-.+++...++.++..+.+-|.. T Consensus 8 ~v~~~h~~y~--a~~~~W~~ird~~~G~~~~r~~g~~YLPk~~~E~~~~Y~~rl~rA~~~n~~~~tl~~l~G~vf~k~p~ 85 (513) T protein:vir:97 8 SPATTSGAYD--QMLPRWHVIETLLGGTEAMREAGETYLPRHQEETDKGYQERLASAVLLNMVEQTLDTLSGKPFSEPIK 85 (513) T ss_pred CCCcCCHHHH--HHHHHHHHHHHHhcChHHHHhhcccCCCCCCCCCHHHHHHHHhcccCCChHHHHHHHHhhhhhhcCcc Confidence 4443333211 111222223333333211 110 011 11 1111222222345555555555555444433 Q ss_pred EEEecCCceeeecchHHHHHhhccC-ccCCHHHHHHHHHHHHHHcCCeeEEeeeCCCCc------------------eee Q lcl|Aclame:pro 70 CMFTSGDTETEEHDTGYAKLLADPC-EYLDPFAFWEWVASTLDIYGETYLAIQKNKSGT------------------PEK 130 (518) Q Consensus 70 v~~~~~~~~~~~~~~~~~~l~~~PN-~~~t~~~f~~~~~~~~ll~G~~~~~i~~~~~G~------------------~~~ 130 (518) +. ..........|+..-. ...+..+|.+.++...+.+|.+++++-....+. |. T Consensus 86 ~~-------~~~p~~~~~~l~~d~D~~G~~L~~f~~~~~~~~l~~G~~~ilVD~P~~~~~~~~~~~T~Ade~~~~~rPy- 157 (513) T protein:vir:97 86 LN-------EDVPKAIEETILPDVDLQGNNLDVFARQWFREGMAKALCHVLIDMPRPAPREDGQPRTLADDRREGLRPY- 157 (513) T ss_pred cC-------cCchHHHHHHHhhccCCCCCCHHHHHHHHHHHHHhcCeEEEEEecCCCCCccchhHHhHHHHHhhccCce- Confidence 21 0011112222444333 356889999999999999999999986654321 11 Q ss_pred eeeeCCcceE----------------------EEeccCcceEEEEeeccCCC-------------Cc-ee-------EEE Q lcl|Aclame:pro 131 LMPMHPSRVA----------------------IKRNSRTGRYEYYFQAGAGV-------------GT-QL-------VSF 167 (518) Q Consensus 131 l~~l~p~~v~----------------------~~~~~~~~~~~~~~~~~~~~-------------~~-~~-------~~~ 167 (518) +..+.|..|. ...+..+.....+|...... .+ +. ..+ T Consensus 158 ~~~~~~e~IinW~~~~v~G~~~L~~v~l~E~~~~~Dgf~~~~~~q~rvL~~g~~~v~r~~~~~~~~~~e~~~~~~g~~~l 237 (513) T protein:vir:97 158 WVMIKPECLLFARSEVINGVEVLQHVRIIEHYMEQDGFAEVCKRRIRVLEPGLVQLWEPVKKSNAQKEEWALADEWATGL 237 (513) T ss_pred EEEecHhhhcCcceeccCcceeeeeEEEEEEEeecCCCcceEEEEEEEEeCceEEEEEeecCCCccccceEEecCCCCcC Confidence 2222222220 11122121211111100000 00 00 011 Q ss_pred eeeeeEEeecCCCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHccCCcceeeeeCCcCCHHHHHHHHHHHHHHhcCcc Q lcl|Aclame:pro 168 ADDEVVPIRFFNPDGLERGLSLMESLKSTIFSEDSSRNATAAMWKNAGRPNLVLRHEKRLSPEAQQRLREQFDRAHAGSS 247 (518) Q Consensus 168 ~~~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~p~gil~~~~~~~~e~~~~~~~~~~~~~~g~~ 247 (518) ..-.++.+-. ...+...|.||+..++..-..+.....-....+...+.|-.++.--. ++.. +...-|+ T Consensus 238 ~~IP~v~~~~-~~~~~~~~~pPLl~LA~ln~~hy~~~Sd~~~il~~~~~P~l~~~G~~---~~~~-------~~i~iG~- 305 (513) T protein:vir:97 238 NYVPLVTFYA-DRQGFMMGKPPLLDLAHLNVAHWQSASDQRHILTVSRFPILACSGAS---GEDS-------DPVVVGP- 305 (513) T ss_pred CceeEEEEec-CCCCCCCCccchHHHHHHHHHHHhhhhhHHHHHHhcccceeeeecCC---cCCC-------CceEeec- Confidence 1122333322 22345568888887765433333333333455666677877765221 1110 0122343 Q ss_pred ccccceeccC-CcccccccCChhhHH-HHHHHHHHHHHHHHHhccchHhhccccccccccHH--HHHHHHHHHHHHHHHH Q lcl|Aclame:pro 248 NTGKTMVVEE-GMEPIPLQLTAVEMQ-FIEARQLNREEVCGVYDIAPPIVHILDRATFSNIS--AQMRAFYRDTMAIPIA 323 (518) Q Consensus 248 n~g~~~vl~~-g~~~~~~~~~~~d~q-~~e~~~~~~~~Ia~~fgVpp~~lg~~~~~~~s~~e--~~~~~~~~~~l~P~~~ 323 (518) ..++.+++ |.++.-+..+...+. ..+..+...+++ +..|. .++.... .+ .+.+ .....-....|.-++. T Consensus 306 --~~~~~lpe~~~~~~yie~~g~~i~~~~~~l~~le~qm-~~~Ga--~ll~~~~-~~-~Ta~a~~~~~~~~~S~L~~~a~ 378 (513) T protein:vir:97 306 --NKVLYNPDPAGRFYYVEHTGQAIAAGRTDLKDLEEQM-AGYGA--EFLKRKT-GG-QTATARALDSAEATSDLSAMTG 378 (513) T ss_pred --cccccCCCCCCcceeeccCchhHHHHHHHHHHHHHHH-HHHHH--HhhccCC-cc-ccHHHHHHHHHHHHHHHHHHHH Confidence 23456664 544443443333222 122233333333 22232 2332211 12 2222 2233334456677788 Q ss_pred HHHHHHHhhhc--ch-hh---ccceeeechhhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHHhC-CCCC-CccCce--- Q lcl|Aclame:pro 324 RIQSAMDKYVG--QY-WV---RKNRMKFDIDDVIQPDWEAKSESTQKMVNSGVATPNEGREIMGL-PRSD-DPKADE--- 392 (518) Q Consensus 324 ~ie~~ln~~l~--~~-~~---~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~T~NE~R~~~g~-~pi~-~~~gD~--- 392 (518) .+++++++.|- -. .+ ....++++.+-....-.....+.+-+++..|.+|....++.+-. .-++ +-.-|+ T Consensus 379 ~le~al~~~l~~~a~wlg~~~~~~~v~in~dF~~~~~~~~~~~al~~a~~~G~is~~t~~~~L~r~gvl~~d~d~~~~~e 458 (513) T protein:vir:97 379 LFEDALAQALDITADWLRLGPNGGTVELVKDYDLEEMDAPGLQALQVAREKRDISRKTYLNGLRLRGVLPEDFDEDEDWE 458 (513) T ss_pred HHHHHHHHHHHHHHHHhCCCCCccEEEeccccCcccCCHHHHHHHHHHHhCCCCCHHHHHHHHHhccCCCccCCHHHHHH Confidence 88888876642 11 11 12334443322222222334566667888999998877766532 1111 000000 Q ss_pred -eee---------cccccccccccccCCCCCCCCCCCCcccCCCCCccCCccccccccChhhhcch Q lcl|Aclame:pro 393 -LYA---------NSALQPLGATPDGAVEGEEAPAPKRPASTPVASLDQSPPASVPGLSPTNSDRS 448 (518) Q Consensus 393 -~~~---------~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 448 (518) +.- ..+..++++.+.... +.... .++...+.++-. .++..+- +.+ T Consensus 459 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~-~~~~~-----~~~~~~~~~~~~---~~~~~~~--~~~ 513 (513) T protein:vir:97 459 ELMEEISEAMGRAGLDLDPAQKNPPEGG-EGEGE-----GEGEGGEGGEGG---EGGGNPG--GES 513 (513) T ss_pred HHHHhhhhccCCCCccccccCCCCCCCC-CCCCC-----CCCCCCCCCCcc---ccCCCCC--CCC Confidence 000 000001110000000 00000 000000000000 0000000 000 No 229 >protein:vir:94709 Length: 522 # NCBI annotation: head to tail connector # Family: family:all:481 # MgeID: mge:1528 # MgeName: K1F # Cross-refs: genbank:acc:YP_338118;genbank:gi:77118196;genbank:GeneID:3707732 Probab=91.97 E-value=0.013 Score=30.85 Aligned_cols=397 Identities=11% Similarity=0.043 Sum_probs=143.0 Q ss_pred CCCCCCCCCccccccccchhhhhhhccCccCCcccCccchhhHHHHhhhHHHHHHHHHHHHhhc-cCceEEEEecCCcee Q lcl|Aclame:pro 1 MLLANGQTLSAPAMAELSPQMQDSYYYAPAVGMQLERQFSLYGGIYKNQPWVRTVIAKRAQALA-RLPVKCMFTSGDTET 79 (518) Q Consensus 1 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~v~~ia~~ia-~lp~~v~~~~~~~~~ 79 (518) .+|......... ...+.+..... -++......+...+. .-||.=....+.... T Consensus 40 ~~~~~~~~~~~~---------------------~~~~~~dst~~-----~a~~~Las~l~~~ltP~~~WFrl~~~d~~~~ 93 (522) T protein:vir:94 40 SLFPKESDNSST---------------------EYTTPWQAVGA-----RCLNNLAAKLMLALFPQSPWMRLTVSEYEAK 93 (522) T ss_pred cccCCCCCcccc---------------------cccccccccHH-----HHHHHHHHHHHhhcCCCCcccccccchhhhh Confidence 333221111000 00000110100 123333333333331 114432221111000 Q ss_pred -----eecc-----------hHHHHHhhccCccCCHHHHHHHHHHHHHHcCCeeEEeeeCCCCceeeeeeeCCcceEEEe Q lcl|Aclame:pro 80 -----EEHD-----------TGYAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQKNKSGTPEKLMPMHPSRVAIKR 143 (518) Q Consensus 80 -----~~~~-----------~~~~~l~~~PN~~~t~~~f~~~~~~~~ll~G~~~~~i~~~~~G~~~~l~~l~p~~v~~~~ 143 (518) .... ..++..+.+- +++.=+..+..+++.+||+++++..+..|.+..+..++-.++.+.. T Consensus 94 ~~~~~~~~~~~v~~~L~~ve~~~~~~~~~s----nf~~~~~~~~~~L~~~G~a~l~~~~~~~~~~~~~~~~pl~~y~v~~ 169 (522) T protein:vir:94 94 TLSQDSEAAARVDEGLAMVERVLMAYMETN----SFRVPLFEALKQLIVSGNCLLYIPEPEQGTYSPMRMYRLVSYVVQR 169 (522) T ss_pred ccCcccchhHHHHHHHHHHHHHHHHHHHhc----CcHHHHHHHHHHHHhhCcEeEeeeccCCCceeeEEEEEcceEEEee Confidence 0000 1112222222 3444455667888899999999877766665444433345566666 Q ss_pred ccCcceE-EEE-eec-------------------------------cCCC--------CceeE-------EEeeeeeEEe Q lcl|Aclame:pro 144 NSRTGRY-EYY-FQA-------------------------------GAGV--------GTQLV-------SFADDEVVPI 175 (518) Q Consensus 144 ~~~~~~~-~~~-~~~-------------------------------~~~~--------~~~~~-------~~~~~~vih~ 175 (518) +..|... .|. +.. -+.. .+..+ .|.....+.+ T Consensus 170 d~~G~vd~i~r~~~~~~~~l~~~~~~~~~~~~~~p~~~v~v~~~v~~~~~~~~~~~~~~g~~~~~~~~~~~~~e~P~~~~ 249 (522) T protein:vir:94 170 DAFGNILQIVTIDKVAFSALPEDVKSQLNADDYEPDTELEVYTHIYRQDDEYLRYEEVEGIEVTGTDGSYPLTACPYIPV 249 (522) T ss_pred CCCcCeEEEeeeeeccHHhcchHHHHHHhcccCCccceEEEEEEEEeeCCceeEEeeccCceecccCCCCccccCCceee Confidence 6555331 110 000 0000 00000 1222234555 Q ss_pred ecCCCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHccCCcceeeeeCCcCCHHHHHHHHHHHHHHhcCccccccceec Q lcl|Aclame:pro 176 RFFNPDGLERGLSLMESLKSTIFSEDSSRNATAAMWKNAGRPNLVLRHEKRLSPEAQQRLREQFDRAHAGSSNTGKTMVV 255 (518) Q Consensus 176 ~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~p~gil~~~~~~~~e~~~~~~~~~~~~~~g~~n~g~~~vl 255 (518) |....++..||.||.+-+...+.....+.+...........|..++.-+....+... ..+.. +.++. T Consensus 250 Rw~~~~ge~YGrgp~~~~l~D~k~L~~l~~~~l~~~~~~~~p~~~v~~~g~~~~~~~----------~~~~~---g~~v~ 316 (522) T protein:vir:94 250 RMVRLDGEDYGRSYCEEYLGDLNSLETITEAITKMAKVASKVVGLVNPNGITQPRRL----------NKAAT---GEFVA 316 (522) T ss_pred eeeecCCCccccchHHHHHHHHHHHHHHHHHHHHHHHHHhCCceeecccccccchhe----------eccCC---ceeec Confidence 666567788999999999999999999999999999998888866554433333321 11111 11222 Q ss_pred --cCCcccccccCChhhHHH-HHHHHHHHHHHHHHhccchHhhccccccccccHHH--HHHHHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 256 --EEGMEPIPLQLTAVEMQF-IEARQLNREEVCGVYDIAPPIVHILDRATFSNISA--QMRAFYRDTMAIPIARIQSAMD 330 (518) Q Consensus 256 --~~g~~~~~~~~~~~d~q~-~e~~~~~~~~Ia~~fgVpp~~lg~~~~~~~s~~e~--~~~~~~~~~l~P~~~~ie~~ln 330 (518) .+++...++... .+.+. .+..+.....|-.+|-+.. ++..+.... +.++ ....-....|.|.+.++.++|= T Consensus 317 g~~~~v~~~~~~~~-~~~~~~~~~i~~~~~rI~~af~~~~--~~~~~~~r~-TAtEV~~r~~E~~~~LG~v~~rl~~E~l 392 (522) T protein:vir:94 317 GRVEDINFLQLTKG-QDFTIAKSVADAIEQRLGWAFLLNS--AVQRNAERV-TAEEIRYVAGELEATLGGVYSVQSQELQ 392 (522) T ss_pred CCcccceeeecccc-cchhHHHHHHHHHHHHHHHHHhhhh--hccCCCccc-cHHHHHHHHHHHHHHHhHHHHHHHHHHH Confidence 223344444332 23332 4555666778888886652 221111111 2221 2223333455555555555543 Q ss_pred hh-------------hcchhhccceeeechh-hhhccCHHHHHHHHHHHHhCCCcCHHHHHHHHhCCCCCCccCceeeec Q lcl|Aclame:pro 331 KY-------------VGQYWVRKNRMKFDID-DVIQPDWEAKSESTQKMVNSGVATPNEGREIMGLPRSDDPKADELYAN 396 (518) Q Consensus 331 ~~-------------l~~~~~~~~~~~fd~~-~l~~~d~~~~~~~~~~~~~~g~~T~NE~R~~~g~~pi~~~~gD~~~~~ 396 (518) .. ++|..... .+++++. .|-. ..+..-+..+.. + .+.+ ..+.|. ..|.. T Consensus 393 ~Pli~r~~~il~r~g~lP~~p~~-~v~v~~~s~La~---~qr~~~~~~l~~--~--~~~i---a~l~P~---~~~~~--- 455 (522) T protein:vir:94 393 LPIVRVLMNQLQSAGMIPDLPKE-AVEPTVSTGLEA---LGRGQDLEKLTQ--A--VNMM---TGLQPL---SQDPD--- 455 (522) T ss_pred HHHHHHHHHHHHhcCCCCCCCcc-cEEeeEecHHHH---HHHHHHHHHHHH--H--HHHH---Hhccch---hhhhc--- Confidence 22 33332221 1233322 2211 111111111111 0 0100 111111 00100 Q ss_pred ccccccccccccCC--CCCCCCCCCCcccCCCCCccCCccccccccChhhhcchhHHHHHHHHHHhhccCcchhHHHHHH Q lcl|Aclame:pro 397 SALQPLGATPDGAV--EGEEAPAPKRPASTPVASLDQSPPASVPGLSPTNSDRSTDSGKTEPRRLMQKPPPKESSPKHLR 474 (518) Q Consensus 397 ~n~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~ 474 (518) .| .+....... .+-+.+. -. -++ ++..+ ..+..+....-+... .+.+.....+... T Consensus 456 id---~d~~~~~~a~~~Gv~~~~---iv----r~~-ee~~~------~~~q~~~~~~~~~~~-----~~~~~~~~a~~~~ 513 (522) T protein:vir:94 456 IN---LPTLKLRLLNALGIDTAG---LL----LTQ-DEKIQ------RMAEQSSQQAVVQGA-----SAAGANMGAAVGQ 513 (522) T ss_pred CC---HHHHHHHHHHHcCCChhh---cc----CCH-HHHHH------HHHHHHHHHHHHHHH-----HHHHHHhhhhhhc Confidence 00 000000000 0000000 00 000 00000 000000000000000 0000000000001 Q ss_pred HHHHHhhhh Q lcl|Aclame:pro 475 AVKGAMGRG 483 (518) Q Consensus 475 ~~~~~~~~~ 483 (518) .....|+.. T Consensus 514 ~~~~~~~~~ 522 (522) T protein:vir:94 514 GAGEDMAQA 522 (522) T ss_pred ccchhhhcC Confidence 111111111 No 230 >protein:vir:80453 Length: 535 # NCBI annotation: BcepGomrgp05 # Family: family:all:584 # MgeID: mge:1882 # MgeName: BcepGomr # Cross-refs: genbank:acc:YP_001210225;genbank:gi:146329917;genbank:GeneID:5123562 Probab=91.90 E-value=0.014 Score=30.80 Aligned_cols=412 Identities=12% Similarity=0.036 Sum_probs=148.8 Q ss_pred CCCCC----------------CCccccccccchhh-----------------hhhhccCcc---CCcc-cCc-------- Q lcl|Aclame:pro 3 LANGQ----------------TLSAPAMAELSPQM-----------------QDSYYYAPA---VGMQ-LER-------- 37 (518) Q Consensus 3 f~~~~----------------~~~~~~~~~~~~~~-----------------~~~~~~~~~---~~~~-~~~-------- 37 (518) +++|. +++.|-.+.-.|.+ .+.++|... .|.. +.. T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~dV~~~hp~y~a~~~~W~~ird~~~G~~~~r~~g~~YLP~~~~~~~~~ 80 (535) T protein:vir:80 1 MARKRTTIRRDVQSKVLIPPQAPPTSGLGPSLPNVGYQRVEFGEMLPKWRKIMDCLSGQEAIKAKREEYLPMPSVDSRDE 80 (535) T ss_pred CCcchhhhhhhhhhhcccCCCCcCCCCCCCCCCCCCcCCHHHHHHHHHHHHHHHHhcChHHHHhcccccCCCCCcccCCc Confidence 33333 22222211111111 011111100 0100 000 Q ss_pred cchhhHHHHhhhHHHHHHHHHHHHhhccCceEEEEecCCceeeecchHHHHHhhccC-ccCCHHHHHHHHHHHHHHcCCe Q lcl|Aclame:pro 38 QFSLYGGIYKNQPWVRTVIAKRAQALARLPVKCMFTSGDTETEEHDTGYAKLLADPC-EYLDPFAFWEWVASTLDIYGET 116 (518) Q Consensus 38 ~~~~~~~~~~~~~~v~~~v~~ia~~ia~lp~~v~~~~~~~~~~~~~~~~~~l~~~PN-~~~t~~~f~~~~~~~~ll~G~~ 116 (518) ........++.-...+-.+..+.+.+.++.|+--. ... -...+..|+..-. ...+..+|.+.++...+.+|.+ T Consensus 81 E~~~~Y~~rl~rA~~~n~~~~tl~~l~G~vfrk~p-----~~~-~p~~l~~l~~d~D~~G~~L~~f~~~~~~~~l~~G~~ 154 (535) T protein:vir:80 81 EQRRRYETYLQRAIFYNVTARTLDGMMGQVFSRDP-----IRQ-LPPALEAIVEDIDGEGVSLDQQAKKALGYTMGFGRA 154 (535) T ss_pred CCHHHHHHHHhhccCCChhHHHHHHHhchhhcCCc-----cee-ccHHHHHHHhccCCCCCCHHHHHHHHHHHHHhcCeE Confidence 00000112222222222223333333333332100 011 1223344444332 2458899999999999999999 Q ss_pred eEEeeeCCCCcee------------eeeeeCCcc-----------------eEE-----Eec-cCcceE--EEEeecc-- Q lcl|Aclame:pro 117 YLAIQKNKSGTPE------------KLMPMHPSR-----------------VAI-----KRN-SRTGRY--EYYFQAG-- 157 (518) Q Consensus 117 ~~~i~~~~~G~~~------------~l~~l~p~~-----------------v~~-----~~~-~~~~~~--~~~~~~~-- 157 (518) ++++.....|... .+..+.|.. |.+ ..+ .++... .|++..- T Consensus 155 ~iLVD~P~~~~~~t~ade~~~~~rPy~~~y~ae~IinW~~~~v~G~~~Lt~v~lrE~~~~~dd~f~~~~~~q~RvL~~~~ 234 (535) T protein:vir:80 155 AIFTDYPNVGRPVTVLEQKLGLYRPTITLVHPTSIINWRTKLVGGKSVISLVVIQENVLAQDDGFETTYVQQWRVLQLNA 234 (535) T ss_pred EEEEeecCCCCcccHHHHHhcCCCcEEEEechhhccCccccccCCccceeEEEEEEEEEecCCCcccceeEEEEEEEecC Confidence 9998765544210 011111111 110 111 111111 1111100 Q ss_pred ------------CCC---Cc--ee-------EEEeeeeeEEeecCCCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHc Q lcl|Aclame:pro 158 ------------AGV---GT--QL-------VSFADDEVVPIRFFNPDGLERGLSLMESLKSTIFSEDSSRNATAAMWKN 213 (518) Q Consensus 158 ------------~~~---~~--~~-------~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~n 213 (518) ... .. .. ..+..-.++++. ....+...|.+|+..++..-..+.....-....+.. T Consensus 235 ~G~y~v~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~IPfv~~~-~~~~~~~~~~pPLl~LA~lni~Hy~~ssd~~~il~~ 313 (535) T protein:vir:80 235 EGNYQVERWRRETQEEMYYSYSKHVPTDGNGNPFKEIPFQFIG-PLDNNADIDHPPLLDLCEVNIGHYRNSADYEEMAFV 313 (535) T ss_pred CceEEEEEEEeecCCccccccceeecccCCCcccCeeEEEEee-cCCCCCCCCccchHHHHHHHHHHhhchhHHHHHHHH Confidence 000 00 00 011222233332 223445568888877765433333332223445566 Q ss_pred cCCcceeeeeCCcCCHHHHHHHHHHHHHHhcCccccccceeccCCcccccccCChhhHHHHHHHHHHHHHHHHHhccchH Q lcl|Aclame:pro 214 AGRPNLVLRHEKRLSPEAQQRLREQFDRAHAGSSNTGKTMVVEEGMEPIPLQLTAVEMQFIEARQLNREEVCGVYDIAPP 293 (518) Q Consensus 214 g~~p~gil~~~~~~~~e~~~~~~~~~~~~~~g~~n~g~~~vl~~g~~~~~~~~~~~d~q~~e~~~~~~~~Ia~~fgVpp~ 293 (518) .+.|-.+++-.....++... .-....-|+. ..+.++.+.++..+..++.-... +..+...+++.+ .|. . T Consensus 314 ~~~P~l~i~G~~~~~~~~~~----~~~~i~iG~~---~~~~lP~~~~~~~~e~~~~~~a~-~~l~~~e~qM~~-lGa--~ 382 (535) T protein:vir:80 314 AGQPTAFFTGLTKDWVEDVF----KDFKVHLGSR---AIIPLPQGATAGILQITPNSVPF-EAMTHKESQMIA-MGA--N 382 (535) T ss_pred hcCceeeeecCchhhhhcCC----CCcceEecCc---ccccCCCCCCcceeeeccchhHH-HHHHHHHHHHHH-HHH--H Confidence 67787777633221111000 0001223332 34567766555444333332221 222222233322 221 1 Q ss_pred hhccccccccccHH-HHHHHHHHHHHHHHHHHHHHHHHhhhc--chh-h-----ccceeeechhhhh-ccCHHHHHHHHH Q lcl|Aclame:pro 294 IVHILDRATFSNIS-AQMRAFYRDTMAIPIARIQSAMDKYVG--QYW-V-----RKNRMKFDIDDVI-QPDWEAKSESTQ 363 (518) Q Consensus 294 ~lg~~~~~~~s~~e-~~~~~~~~~~l~P~~~~ie~~ln~~l~--~~~-~-----~~~~~~fd~~~l~-~~d~~~~~~~~~ 363 (518) ++.. ...+....+ .....-....|.-++..++++++..|- ..+ + ....+.++.+-.. ..|.. ..+.+- T Consensus 383 ll~~-~~~~~Ta~~a~~~~~~~~S~L~~~a~~le~al~~aL~~~A~w~G~~~~~~~~~i~~n~dF~~~~ld~~-~~~all 460 (535) T protein:vir:80 383 LLVK-SGGNRTFGEAQQEEASEQSILSACTKNVSMAFRKALRWANQFQTGIVNDETVEYNLNTDFPAARLTPN-ERAELI 460 (535) T ss_pred hhcc-CcccccHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHcCCccCCCceEEEeccccccccCCHH-HHHHHH Confidence 1211 111111111 122222345567777888888876542 111 1 1223333333222 22444 455566 Q ss_pred HHHhCCCcCHHHHHHHHhCCCCCCc---cCcee-eecccccccccccccCCCCCCCCCCCCcccCCCCCccCCcc Q lcl|Aclame:pro 364 KMVNSGVATPNEGREIMGLPRSDDP---KADEL-YANSALQPLGATPDGAVEGEEAPAPKRPASTPVASLDQSPP 434 (518) Q Consensus 364 ~~~~~g~~T~NE~R~~~g~~pi~~~---~gD~~-~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 434 (518) ++++.|.|+....++.+..--+-+| +-++. .+......++...+.........++..+.++.++..++..+ T Consensus 461 ~~~~~G~Is~et~~~~L~r~gvl~~~~~~eee~~ri~~E~~~~~~~~g~~~d~~~~g~~~~~~~~~~~~~~~~~~ 535 (535) T protein:vir:80 461 LEWQQGAITFKEMRAGLRRAGVASEDDAKAETEGKATVEFIAKTAAAGKVGDAASGGTNKAKLNNGNGGGNQAGN 535 (535) T ss_pred HHHhcCCCCHHHHHHHHHhCCCCCcccchHHHHHHHHhhhhhccccCCCCCCCCCCCCCcCcccCCccccccCCC Confidence 7888999999998887744322111 11111 00001001111100000001111111122221111111111 No 231 >protein:vir:103765 Length: 549 # NCBI annotation: hypothetical protein # Family: family:all:481 # MgeID: mge:1645 # MgeName: BcepC6B # Cross-refs: genbank:acc:YP_024925;genbank:gi:48697195;genbank:GeneID:2846089 Probab=91.76 E-value=0.014 Score=30.69 Aligned_cols=409 Identities=11% Similarity=-0.022 Sum_probs=139.9 Q ss_pred CC---CCCCCCCccccccccchhhhhhhccCccCCcccCccchhhHHHHhhhHHHHHHHHHHHHhhc--cCceEEEEecC Q lcl|Aclame:pro 1 ML---LANGQTLSAPAMAELSPQMQDSYYYAPAVGMQLERQFSLYGGIYKNQPWVRTVIAKRAQALA--RLPVKCMFTSG 75 (518) Q Consensus 1 ~~---f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~v~~ia~~ia--~lp~~v~~~~~ 75 (518) +. |+.......+.. ......+.... .-.+......+...+- .-||.=....+ T Consensus 40 ~~~~~~~~~~~~~~~~~------------------~~~~~~~dstg-----~~a~~~LAs~l~~~ltpp~~~wF~l~~~~ 96 (549) T protein:vir:10 40 RLDKFGQLPRPDSEKGR------------------ERSQKMFDSTA-----PLALRNFVAAMDSMITPATQLWHRLKTGN 96 (549) T ss_pred ccccccccCCCCCCccc------------------ccccccccchH-----HHHHHHHHHHHHhhccCCCCccccccCCc Confidence 11 111110000000 00000000000 0133333333333332 33443222111 Q ss_pred Cc-eeeec-chHHHH----HhhccC-ccCCHHHHHHHHHHHHHHcCCeeEEeeeCCCCceeeeeeeCCcceEEEeccCcc Q lcl|Aclame:pro 76 DT-ETEEH-DTGYAK----LLADPC-EYLDPFAFWEWVASTLDIYGETYLAIQKNKSGTPEKLMPMHPSRVAIKRNSRTG 148 (518) Q Consensus 76 ~~-~~~~~-~~~~~~----l~~~PN-~~~t~~~f~~~~~~~~ll~G~~~~~i~~~~~G~~~~l~~l~p~~v~~~~~~~~~ 148 (518) .. ..... ...+.. +...-+ ..-+++.-+..+..+++++||+.+++..+.. +.+.+..++-.++.+..+..|. T Consensus 97 ~~~~e~~~v~~~l~~ve~~~~~~~~~~~snf~~~~~~~~~~L~~~Gta~l~~~~~~~-~~~~f~~~pl~~~~v~~d~~G~ 175 (549) T protein:vir:10 97 DALNEIASVKAYLQGVVRTLFAARYRWQGGFVTQMGATYQSIGLFGPGALMIEHDVG-KGIVYRNVPMQRLWFAENNSGL 175 (549) T ss_pred cchhhhhHHHHHHHHHHHHHHHHHhhhhcChHHHHHHHHHHHHhhcceeeEEeecCC-CeeEEEEEEcCeEEEeeCCCCC Confidence 10 00000 001111 111001 1122344455667889999999999866543 4445555555666666666554 Q ss_pred eEEEEee-------------ccCC----------CCceeEE--------------------------------------- Q lcl|Aclame:pro 149 RYEYYFQ-------------AGAG----------VGTQLVS--------------------------------------- 166 (518) Q Consensus 149 ~~~~~~~-------------~~~~----------~~~~~~~--------------------------------------- 166 (518) ....... ...- .....++ T Consensus 176 vd~i~r~~~~t~~ql~~~fg~~~l~~~v~~~~~~~~~~~~~v~~~V~pr~~~~~~~~~~~~~pf~sv~~e~~~~~il~es 255 (549) T protein:vir:10 176 IDKTHVQWELTLRQAAQRFGRENLSPSMQSTLEKDPEKSAIFYHAVEPRADRDPRKLDGRNMQFASYWLDEGRDRIVQNS 255 (549) T ss_pred eEEEEEEeecCHHHHHHhcCcccCCHHHHHHhhcCCCceEEEEEEeecCCCCCccccccccCceEEEEEEecCCEeeccC Confidence 3221100 0000 0000000 Q ss_pred -EeeeeeEEeecCCCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHccCCcceeeeeCCcCCHHHHHHHHHHHHHHhcC Q lcl|Aclame:pro 167 -FADDEVVPIRFFNPDGLERGLSLMESLKSTIFSEDSSRNATAAMWKNAGRPNLVLRHEKRLSPEAQQRLREQFDRAHAG 245 (518) Q Consensus 167 -~~~~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~p~gil~~~~~~~~e~~~~~~~~~~~~~~g 245 (518) |.....+-.|....+|..||.||.+-+...+.....+.+.......-...|.+.+.......+.. ...| T Consensus 256 g~~e~P~~~~Rw~~~~ge~YGrgp~~~~l~D~k~L~~l~~~~l~~~~~~~~p~~~v~~~g~~~~~~----------l~pg 325 (549) T protein:vir:10 256 GFRTFPFAIGRFYVGTDDVYGGSPAYDAMPDVRMANDMAKTNIRGAQKLVDPPLLANEDGVLDGFD----------LRSG 325 (549) T ss_pred CcccCCcceeeeeecCCCccccchHHHHHHHHHHHHHHHHHHHHHHHHHhcCceeeccccccccce----------eccC Confidence 00111222333444677899999999999999999999999988888888877754333333211 1122 Q ss_pred ccccccceeccCCcccccccCChhhHHH-HHHHHHHHHHHHHHhccchHh-hccccccccccHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 246 SSNTGKTMVVEEGMEPIPLQLTAVEMQF-IEARQLNREEVCGVYDIAPPI-VHILDRATFSNISAQMRAFYRDTMAIPIA 323 (518) Q Consensus 246 ~~n~g~~~vl~~g~~~~~~~~~~~d~q~-~e~~~~~~~~Ia~~fgVpp~~-lg~~~~~~~s~~e~~~~~~~~~~l~P~~~ 323 (518) ..+. ......+...++|+... .+.+. .+..+.....|-.+|-+.... +-..+..|-.-+ .....-....|.|.+. T Consensus 326 g~~~-~~~~~~~~~~~~pl~~~-~~~~~~~~~i~~~~~rI~~af~~d~~~~~~~~~~~TAtEV-~~r~~E~~~~LGpv~~ 402 (549) T protein:vir:10 326 ALNW-GGLNDKGEEMVKPLLTG-KQAQIGIEFAQDTRQTINQWFYVTLFQILVDSGDMTATEV-LQRAQEKGVLLAPTLG 402 (549) T ss_pred Cccc-cccCCCCccceeeeccc-cchhHHHHHHHHHHHHHHHHHhhhhhhhhcCCCCccHHHH-HHHHHHHHHHhhHHHH Confidence 2111 01111223446666543 23332 344566678899999776532 222222221111 1222233344555555 Q ss_pred HHHHHH------------Hhh-hcchhhc-----cceeeech-hhhhccCHHHHHHHHHHHHh-----CCCcCHHHHHHH Q lcl|Aclame:pro 324 RIQSAM------------DKY-VGQYWVR-----KNRMKFDI-DDVIQPDWEAKSESTQKMVN-----SGVATPNEGREI 379 (518) Q Consensus 324 ~ie~~l------------n~~-l~~~~~~-----~~~~~fd~-~~l~~~d~~~~~~~~~~~~~-----~g~~T~NE~R~~ 379 (518) ++.++| .+. ++|.... ...+.+.. +.|-+.-.....+.+...++ .+ +.| |+-.. T Consensus 403 rl~~E~l~Pli~R~~~il~r~g~lP~~p~~l~~~~~~~~i~yis~La~aq~~~~~~~i~~~~~~~~~laq-~~P-e~ld~ 480 (549) T protein:vir:10 403 RTQSELLGPMIAREVDILAEAGQLPDMPQELIDAGADVDVEYDSPLNKAMRAGEGAAILQWLQQLGIVSQ-FDP-AAAKV 480 (549) T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCCChhhhcCCceeEEEeecHHHHHHHHHHHHHHHHHHHHHHHHhc-cCh-hHHhc Confidence 554443 221 3332211 11122221 12211111111111111111 01 111 12111 Q ss_pred HhCCCCCCccCceeeecccccccccccccCCCCCCCCCCCCcccCCCCCccCCccccccccChhhhcchhHHHHHHHHHH Q lcl|Aclame:pro 380 MGLPRSDDPKADELYANSALQPLGATPDGAVEGEEAPAPKRPASTPVASLDQSPPASVPGLSPTNSDRSTDSGKTEPRRL 459 (518) Q Consensus 380 ~g~~pi~~~~gD~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 459 (518) ++.+.+-+.-++.+-+|..++.-+. +. +..... +...+....-..... T Consensus 481 id~d~~~~~~a~~~Gvp~~~irs~e---------------------------ev-~~~r~~--~~~qqq~~~~~~~a~-- 528 (549) T protein:vir:10 481 PNGARIARLLADYGGVPVEAMSTDE---------------------------EL-QAQQAA--EAQAAQMQQMLAAAP-- 528 (549) T ss_pred CCHHHHHHHHHHhcCCCccccCCHH---------------------------HH-HHHHHH--HHHHHHHHHHHHHHH-- Confidence 1111110000111111111000000 00 000000 000000000000000 Q ss_pred hhccCcchhHHHHHHHHHHHhhhh Q lcl|Aclame:pro 460 MQKPPPKESSPKHLRAVKGAMGRG 483 (518) Q Consensus 460 ~~k~~~~~~~~~~~~~~~~~~~~~ 483 (518) .+-...++.+....+.- =.+. T Consensus 529 ~a~~~a~~~~~~~ta~~---~~~~ 549 (549) T protein:vir:10 529 VAAGAIKDLSDAQTAAQ---TARV 549 (549) T ss_pred HHHHHHHhhhhhcCCCc---ccCC Confidence 00000001100000000 0000 No 232 >protein:vir:7017 Length: 515 # NCBI annotation: head portal protein # Family: family:all:481 # MgeID: mge:141 # MgeName: SP6 # Cross-refs: genbank:acc:NP_853590;genbank:gi:31711672;genbank:GeneID:1481798 Probab=90.79 E-value=0.019 Score=30.02 Aligned_cols=390 Identities=12% Similarity=0.064 Sum_probs=144.2 Q ss_pred CCCCCCCCCccccccccchhhhhhhccCccCCcccCccchhhHHHHhhhHHHHHHHHHHHHhhc--cCceEEEEecCCce Q lcl|Aclame:pro 1 MLLANGQTLSAPAMAELSPQMQDSYYYAPAVGMQLERQFSLYGGIYKNQPWVRTVIAKRAQALA--RLPVKCMFTSGDTE 78 (518) Q Consensus 1 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~v~~ia~~ia--~lp~~v~~~~~~~~ 78 (518) .+|.+.... ....+.+..+. .-++......+...+- +-||.=..-.+... T Consensus 43 ~~~~~~~~~-----------------------~~~~~~~dstg-----~~a~~~LAa~l~~~ltpp~~~WF~l~~~d~~~ 94 (515) T protein:vir:70 43 YLMNNKGDN-----------------------ETSQNGWQGVG-----AQATNHLANKLAQVLFPAQRSFFRVDLTAKGE 94 (515) T ss_pred cccCCCCCc-----------------------ccccccccchH-----HHHHHHHHHHHHHhhcCCCCcccccccChhhh Confidence 344321110 00001111111 1244455555555443 34553222111100 Q ss_pred ee-----ec----c-------hHHHHHhhccCccCCHHHHHHHHHHHHHHcCCeeEEeeeCCCCceeeeeeeCCcceEEE Q lcl|Aclame:pro 79 TE-----EH----D-------TGYAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQKNKSGTPEKLMPMHPSRVAIK 142 (518) Q Consensus 79 ~~-----~~----~-------~~~~~l~~~PN~~~t~~~f~~~~~~~~ll~G~~~~~i~~~~~G~~~~l~~l~p~~v~~~ 142 (518) .. .. + ..++..+.+ -+++.=+.....+++.+||+.+++. .++. ...||+ .++.+. T Consensus 95 ~~l~~~~~~~~~v~~~l~~ve~~~~~~l~~----snf~~~~~~~~~~L~~~G~a~l~~d--~~~~-~~~~pl--~~y~v~ 165 (515) T protein:vir:70 95 KVLDDRGLKKTQLATIFARVETTAMKALEQ----RQFRPAIVEVFKHLIVAGNCLLYKP--SKGA-MSAVPM--HHYVVN 165 (515) T ss_pred hccccchhHHHHHHHHHHHHHHHHHHHHHh----cCchHHHHHHHHHHHhHCeEEEEEe--CCCC-eEEEEc--CeEEEe Confidence 00 00 0 111112222 2444455566777889999988763 2332 445665 334444 Q ss_pred eccCcceE-------------------------------------EEEeeccCCCC---------cee------EEEeee Q lcl|Aclame:pro 143 RNSRTGRY-------------------------------------EYYFQAGAGVG---------TQL------VSFADD 170 (518) Q Consensus 143 ~~~~~~~~-------------------------------------~~~~~~~~~~~---------~~~------~~~~~~ 170 (518) .+..|... .|........+ +.. +.|... T Consensus 166 ~d~~G~v~~i~rr~~~t~~~l~~~f~~~~~~~~~~~~~~~~~~v~i~~~v~~~~~~~~~~~~e~d~~~~~~es~y~~~e~ 245 (515) T protein:vir:70 166 RDTNGDLMDVILLQEKALRTFDPATRMAIEVGMKGKKCKEDDNVKLYTHAQYAGEGFWKINQSADDIPVGKESRIKSEKL 245 (515) T ss_pred eCCCcCeeEEEeeeeccHHHHHHhhhhhhhhhhhhhhcCCCCceEEEEEEEecCCCceEEEEecCceeeccccccccccC Confidence 44444322 11100000000 000 001112 Q ss_pred eeEEeecCCCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHccCCcceeeeeCCcCCHHHHHHHHHHHHHHhcCccccc Q lcl|Aclame:pro 171 EVVPIRFFNPDGLERGLSLMESLKSTIFSEDSSRNATAAMWKNAGRPNLVLRHEKRLSPEAQQRLREQFDRAHAGSSNTG 250 (518) Q Consensus 171 ~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~p~gil~~~~~~~~e~~~~~~~~~~~~~~g~~n~g 250 (518) ..+-+|....+|..||.||.+-+...+.....+.+.......-...|.+++.-+....+... . .|. + T Consensus 246 P~~~~Rw~~~~ge~YGrgp~~~~l~D~k~L~~l~~~~l~~~~~a~~p~~lv~~~g~~~~~~l-------~---~~~-~-- 312 (515) T protein:vir:70 246 PFIPLTWKRSYGEDWGRPLAEDYSGDLFVIQFLSEAMARGAALMADIKYLIRPGSQTDVDHF-------V---NSG-T-- 312 (515) T ss_pred CceeeeeeecCCCCcccchHHHhhHHHHHHHHHHHHHHHHHHHhcCCCeeeCcccccchhhc-------c---ccC-C-- Confidence 33444555556778999999999999999999999998888888888766543333222211 1 111 1 Q ss_pred cceeccC---CcccccccCChhhHHH-HHHHHHHHHHHHHHhccchHhhccccccccccHHHHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 251 KTMVVEE---GMEPIPLQLTAVEMQF-IEARQLNREEVCGVYDIAPPIVHILDRATFSNISAQMRAFYRDTMAIPIARIQ 326 (518) Q Consensus 251 ~~~vl~~---g~~~~~~~~~~~d~q~-~e~~~~~~~~Ia~~fgVpp~~lg~~~~~~~s~~e~~~~~~~~~~l~P~~~~ie 326 (518) + .++++ ++...++.. ..|.+. .+..+.....|-.+|=+........+..|-.-+ .....-....|.|.+.++. T Consensus 313 g-~iv~g~~~~v~~~~~~~-~~d~~~~~~~i~~~~~rI~~af~~~~l~~rd~~rvTAtEV-~~r~~E~~~~LGpv~srL~ 389 (515) T protein:vir:70 313 G-EVITGVAEDIHIVQLGK-YADLTPISAVLEVYTRRIGVIFMMETMTRRDAERVTAVEI-QRDALEIEQNMGGVYSLFA 389 (515) T ss_pred c-eeecCCcccceeeecCc-ccchhHHHHHHHHHHHHHHHHHhhhhhhccCCccccHHHH-HHHHHHHHHHhhHHHHHHH Confidence 1 12222 222322222 233332 344556677888888766543333333222211 2233444556778888877 Q ss_pred HHHHhhhc--------chhhccceeeechhhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHHhCCCCCCccCceeeeccc Q lcl|Aclame:pro 327 SAMDKYVG--------QYWVRKNRMKFDIDDVIQPDWEAKSESTQKMVNSGVATPNEGREIMGLPRSDDPKADELYANSA 398 (518) Q Consensus 327 ~~ln~~l~--------~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~T~NE~R~~~g~~pi~~~~gD~~~~~~n 398 (518) ++|=..|+ +..... .++... +.......+......+.. +.+-+=-....+| +-.|.+ | T Consensus 390 ~Ell~Pli~r~~~~~~p~~P~~-~v~~~~--vs~l~~L~r~q~~~~i~~----~~q~i~~~~~~~p---~~~~~i----d 455 (515) T protein:vir:70 390 MTMQTPIAMWGLQEAGDSFTSE-LVDPVI--VTGIEALGRMAELDKLAN----FAQYMSLPQTWPE---PAQRAI----R 455 (515) T ss_pred HHHHHHHHHHHHHhhCCCCChh-hcccce--ehhHHHHHHHHHHHHHHH----HHHHHHHHhccCh---hHHhhC----C Confidence 77654442 211110 011110 000011111111111100 0000000011111 011111 0 Q ss_pred ccc-cccccccCCCCCCCCCCCCcccCCCCCccCCccccccccChhhhcchhHHHHHHHHHHhhccCcchhHHHHHHHHH Q lcl|Aclame:pro 399 LQP-LGATPDGAVEGEEAPAPKRPASTPVASLDQSPPASVPGLSPTNSDRSTDSGKTEPRRLMQKPPPKESSPKHLRAVK 477 (518) Q Consensus 399 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~ 477 (518) ... +...... .+ .|..--..+ + +..... ..+.+..-...++.+.++-.........+ T Consensus 456 ~d~~~~~~a~~--~g-------~p~~~~rs~--e-------ev~~~r----~q~~~~~~~~~~~~~~~~a~~~~~~~~~~ 513 (515) T protein:vir:70 456 WGDYMDWVRGQ--IS-------AELPFLKSE--E-------EMQQEM----AQQAQAQQEAMLNEGVAKAVPGVIQQEMK 513 (515) T ss_pred HHHHHHHHHHH--hC-------CCccccCCH--H-------HHHHHH----HHHHHHHHHHHHHHhhhhhcccchhhhhc Confidence 000 0000000 00 000000000 0 000000 11111111122223333333222233333 Q ss_pred HH Q lcl|Aclame:pro 478 GA 479 (518) Q Consensus 478 ~~ 479 (518) .+ T Consensus 514 ~~ 515 (515) T protein:vir:70 514 EG 515 (515) T ss_pred cC Confidence 33 No 233 >protein:vir:98265 Length: 524 # NCBI annotation: gp20 portal vertex of the head # Family: family:all:1036 # MgeID: mge:1667 # MgeName: RB43 # Cross-refs: genbank:acc:YP_239198;genbank:gi:66391673;genbank:GeneID:3416367 Probab=90.10 E-value=0.023 Score=29.60 Aligned_cols=405 Identities=11% Similarity=0.038 Sum_probs=163.5 Q ss_pred CCCCCCCCCccccccccchhhhhh-----hccCc---cCC--c--c-cCccchhhHHHHhhhHHHHHHHHHHHHhhcc-- Q lcl|Aclame:pro 1 MLLANGQTLSAPAMAELSPQMQDS-----YYYAP---AVG--M--Q-LERQFSLYGGIYKNQPWVRTVIAKRAQALAR-- 65 (518) Q Consensus 1 ~~f~~~~~~~~~~~~~~~~~~~~~-----~~~~~---~~~--~--~-~~~~~~~~~~~~~~~~~v~~~v~~ia~~ia~-- 65 (518) -+-.+..+..+|.....+..+... +++.- ..+ . + .......|+++ +.+|-|..||+-|.+.+.- T Consensus 27 ~~~~~~~s~~~p~~~dGa~~i~~~~~~~~~~g~~~~~y~~~e~~~~~~~eLI~~YR~m-a~~pEvd~Av~eIVneaIv~~ 105 (524) T protein:vir:98 27 QLKNDTGSVAPPKNNDGAYEIETDLNNQKYAGVFQQFYSGQDPAIQNKEQLINTYRGI-MSYPEVENAVSEIIDDAIVNE 105 (524) T ss_pred hhcCCcccccCCCCCCCceeecCCCCcceecceeeeeccccccccchHHHHHHHHHHH-hhccchhhHHHhhhcceeEec Confidence 222222222222222111111100 00000 000 0 0 11122334555 6889999999999988742 Q ss_pred ---CceEEEEecCCceee---ecchHHHHHhhccCccCCHHHHHHHHHHHHHHcCCeeEEeeeCCCC--ceeeeeeeCCc Q lcl|Aclame:pro 66 ---LPVKCMFTSGDTETE---EHDTGYAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQKNKSG--TPEKLMPMHPS 137 (518) Q Consensus 66 ---lp~~v~~~~~~~~~~---~~~~~~~~l~~~PN~~~t~~~f~~~~~~~~ll~G~~~~~i~~~~~G--~~~~l~~l~p~ 137 (518) -|..|--.+-+-... .....+..++.--+-...++++ ++.+++.|..|..++-+.+. .+.+|..|+|. T Consensus 106 ~~~~pV~l~L~~~~~s~~iK~kI~eeF~~Il~ll~F~~~~~~~----fR~WYVDgRi~fhkiid~~~~kGI~ELr~lDPr 181 (524) T protein:vir:98 106 QGKDIITMDLAKTNFSKAIQDKIVEEFDNVLNIYDFDNMGARL----FRDWYVDSRIYFHKIMHKDESKGIRELRQLDPR 181 (524) T ss_pred CCCceEEEEecccccchHHHHHHHHHHHHHHHHhccchhhhHH----HhhhhhcceeEEEEEEcCCCCcceeeeeeeCCc Confidence 233332211110011 1111222233333334445554 45567899999999865443 38999999999 Q ss_pred ceEEEec-----cCcc-------eEEEEeeccC------C---CCceeEEEeeeeeEEeecCCCC-cccccchHHHHHHH Q lcl|Aclame:pro 138 RVAIKRN-----SRTG-------RYEYYFQAGA------G---VGTQLVSFADDEVVPIRFFNPD-GLERGLSLMESLKS 195 (518) Q Consensus 138 ~v~~~~~-----~~~~-------~~~~~~~~~~------~---~~~~~~~~~~~~vih~~~~~~~-~~~~G~s~~~~~~~ 195 (518) .++.++. .+++ ..+|.|.... + ..+..++++.+.|.|....-.+ +... +|-|..|.. T Consensus 182 ~i~~vr~~~~~~~~~~~~v~~~~~e~f~Y~~~~~~~~~~g~~~~~~~~ikI~~dAIvy~hSGL~d~~~~i-isyLhkAiK 260 (524) T protein:vir:98 182 CMELIRESITETLDGGVKVFRGYREFFVYSAPKAGYTYNGQIYQANQKIKIPRSAIVYAHSGLEDCSNNI-IGYLHRAVK 260 (524) T ss_pred cceeeeeccccccccchhhccceeeeeeeccCCCccccccceecCCCceeechhheeeeccCcccCCCCe-eeehhHhhH Confidence 9976541 1111 1122222111 0 1234477888889887633221 1112 577788877 Q ss_pred HHHHHHHHHHHHHHHHHccCCcceeeeeCC-cCCHHHHHHHHHHHHHHhc---------C-cccccccee-cc------- Q lcl|Aclame:pro 196 TIFSEDSSRNATAAMWKNAGRPNLVLRHEK-RLSPEAQQRLREQFDRAHA---------G-SSNTGKTMV-VE------- 256 (518) Q Consensus 196 ~i~~~~~~~~~~~~~~~ng~~p~gil~~~~-~~~~e~~~~~~~~~~~~~~---------g-~~n~g~~~v-l~------- 256 (518) .+....-++...--+==.-+.-+-|+.++- .+.+..+++..+.+-..|. | ..+..+.+- ++ T Consensus 261 p~NQLkm~EDAlVIYRitRAPeRRvFYIDvGnlPk~KAeqYl~~im~k~kNklvYDa~TGevrddrk~msMlEDyWLpRR 340 (524) T protein:vir:98 261 PANQLRLLEDAMVIYRITRAPERRVFYIDVGQMGGNKATQYVNNIAQGLKNRVVYDARTGTVKNQQNNLSMTEDYWLMRR 340 (524) T ss_pred hHHhhHHHHhhHHHHhhhccccceEEEEecCCCCchhHHHHHHHHHHhcCceeEeeccCceeeccccccchhhhhccccc Confidence 777777666654433223333344555542 3333334444444444333 1 111122221 11 Q ss_pred ---CCcccccccCChhhHHHHHHHHHHHHHHHHHhccchHhhcccc-ccccccHHHH---HHHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 257 ---EGMEPIPLQLTAVEMQFIEARQLNREEVCGVYDIAPPIVHILD-RATFSNISAQ---MRAFYRDTMAIPIARIQSAM 329 (518) Q Consensus 257 ---~g~~~~~~~~~~~d~q~~e~~~~~~~~Ia~~fgVpp~~lg~~~-~~~~s~~e~~---~~~~~~~~l~P~~~~ie~~l 329 (518) .|.+++.+... +.+.-++-.++..+.+.++++||.+-++..+ +-+.+-..+- ...|. .-|.-+..++...+ T Consensus 341 eGgrgTEItTLpgg-qnlgem~DV~YF~kkLy~aLnVP~sRl~~~~~~f~~Gr~~EItRDEiKF~-KFI~rLR~rFs~lf 418 (524) T protein:vir:98 341 DGKAITEVSTLPGG-QNFSDMDDIKWFNRKLYEALRVPLSRMPRDDGGMQIGGGGEITRDELKFS-KFIRTLQIQFSPVL 418 (524) T ss_pred CCCCccceeecccc-CCcChHHHHHHHHHHHHHHhCCCceeccCCCCccccccccchhHHHHHHH-HHHHHHHHHHHHHH Confidence 23444444322 2233334455667889999999999886432 1111111111 11121 12333333333333 Q ss_pred H----hhh-----cchh--h---ccceeeechhh----hhccC-HHHHHHHHHHHHh--CCCcCHHHHHHH-HhCCCCCC Q lcl|Aclame:pro 330 D----KYV-----GQYW--V---RKNRMKFDIDD----VIQPD-WEAKSESTQKMVN--SGVATPNEGREI-MGLPRSDD 387 (518) Q Consensus 330 n----~~l-----~~~~--~---~~~~~~fd~~~----l~~~d-~~~~~~~~~~~~~--~g~~T~NE~R~~-~g~~pi~~ 387 (518) . ..| ++.. . ....+.|..+. +.... ...|...+..+-. .-+++.+=+|+. |.+.--+- T Consensus 419 ~~~L~~qLilKgiit~eew~~i~~~I~~~f~~Dn~f~ElKe~Eil~~R~~~l~~~dpyvGky~s~dyi~k~ILr~tDeei 498 (524) T protein:vir:98 419 SDPLKTNLIAKKIITEDEWEENVSKISFVFQQDSYYAEVKDIEILERRLNLMSQVEGVVGKYVSHKYIMKEILRMSDEDI 498 (524) T ss_pred HHHHHHhhhhhcCCCHHHHHHHhhcceEEEeecchHHHHHHHHHHHHHHHHHHHhccccccccchHHHHHHHhccCHHHH Confidence 3 332 2211 1 12233333222 11111 1223333332211 124444444432 33321100 Q ss_pred ccCceeeecccccccccccccCCCCCCCCCCCCcccCCCCCccCCc Q lcl|Aclame:pro 388 PKADELYANSALQPLGATPDGAVEGEEAPAPKRPASTPVASLDQSP 433 (518) Q Consensus 388 ~~gD~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 433 (518) ..-++ .-......+--+ .|..+. ++- T Consensus 499 ~~~~k---------------~I~~E~k~~~~~----~p~~e~-~~f 524 (524) T protein:vir:98 499 DEQAK---------------LIEEESKEERFK----NPEAEE-ENF 524 (524) T ss_pred HHHHH---------------HHHHHHhCCCCc----CCcccc-ccC Confidence 00000 000000000000 000011 111 No 234 >protein:vir:101806 Length: 516 # NCBI annotation: gp20 # Family: family:all:1036 # MgeID: mge:1580 # MgeName: 31 # Cross-refs: genbank:acc:YP_238883;genbank:gi:66391958;genbank:GeneID:3416633 Probab=89.73 E-value=0.025 Score=29.40 Aligned_cols=405 Identities=8% Similarity=0.036 Sum_probs=166.6 Q ss_pred CCCCCCC----------------CCccccccccchhhhh-----hhccCccCCc-------ccCccchhhHHHHhhhHHH Q lcl|Aclame:pro 1 MLLANGQ----------------TLSAPAMAELSPQMQD-----SYYYAPAVGM-------QLERQFSLYGGIYKNQPWV 52 (518) Q Consensus 1 ~~f~~~~----------------~~~~~~~~~~~~~~~~-----~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~v 52 (518) -|||... +..+|.....+..+.. .+++.-+..+ ........|+++ +.+|-| T Consensus 5 ~lf~f~~~~d~~~~~~~~~~~~~s~~~p~~~dGa~~i~~~~~~~~~~g~~~~~~~~~~~~~~~~eLI~~YR~m-a~~pEv 83 (516) T protein:vir:10 5 DLFKFWDRVDQNEYDERLKLGHESIATPKKDDGATEIETREGEATYNAVMQQFFGIDNNISGTKDLINTYRQL-INNPEV 83 (516) T ss_pred HhcccccchhhhHHhhhhcCCcCcccCCCCCCCceeeecCCCcccccceeeeeeccccccchHHHHHHHHHHH-hhccch Confidence 3565511 1111111111110100 0111100000 011122334555 688999 Q ss_pred HHHHHHHHHhhcc-----CceEEEEecCCceee---ecchHHHHHhhccCccCCHHHHHHHHHHHHHHcCCeeEEeeeC- Q lcl|Aclame:pro 53 RTVIAKRAQALAR-----LPVKCMFTSGDTETE---EHDTGYAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQKN- 123 (518) Q Consensus 53 ~~~v~~ia~~ia~-----lp~~v~~~~~~~~~~---~~~~~~~~l~~~PN~~~t~~~f~~~~~~~~ll~G~~~~~i~~~- 123 (518) ..||+-|.+.+.- -|..|--.+-+-... .....+..++.--+-...++++ ++.+++.|..|..++-+ T Consensus 84 d~Av~eIVneaiv~d~~~~pV~l~L~~~~~s~~ik~kI~eeF~~Il~ll~F~~~~~~~----fR~WYVDgRi~fhKiid~ 159 (516) T protein:vir:10 84 ERAVANIVNEAIVYERGHKVVSLDLDDTDFGSNVKEKILEEFDEVCRLLDASRKLDTL----FRRWYVDSRIFFHKIMPN 159 (516) T ss_pred hhHHHHhhcceeEecCCCceEEEEecccCcchHHHHHHHHHHHHHHHHhccchhhhHH----HhhhhhcceEEEEEEecC Confidence 9999999988753 233332221110011 1111222233333344455554 45567899999886554 Q ss_pred CCCceeeeeeeCCcceEEEecc-----Ccce------EEEEeeccC---------CCCceeEEEeeeeeEEee--cCCCC Q lcl|Aclame:pro 124 KSGTPEKLMPMHPSRVAIKRNS-----RTGR------YEYYFQAGA---------GVGTQLVSFADDEVVPIR--FFNPD 181 (518) Q Consensus 124 ~~G~~~~l~~l~p~~v~~~~~~-----~~~~------~~~~~~~~~---------~~~~~~~~~~~~~vih~~--~~~~~ 181 (518) .+..+.+|..|+|..++.++.- .+.. .+|.|.... ...+.+++++.+-|.|.. ..+.+ T Consensus 160 ~k~GI~Elr~lDPr~i~~vR~i~~~~~~~~~v~~~~~e~~~Y~~~~~~~~~~g~~~~~~~~ikI~~dAI~y~hSGL~d~~ 239 (516) T protein:vir:10 160 PKKGIAELRRLDPRFMEYYREIVTSDIGGTTIVKGYREFFIYTTGNEGYSYNGRIFEPNTRIKIPRSAVVYASSGLMDCS 239 (516) T ss_pred ccccceeeeeeCCcceeeEeeecccccccchhhhhhhheeeeccCccccccccceeCCCcceeechhheeeecccceeCC Confidence 3456899999999998865432 1111 223222111 112345667666665554 22333 Q ss_pred cccccchHHHHHHHHHHHHHHHHHHHHHHHHccCCcceeeeeCC-cCCHHHHHHHHHHHHHHhcC----cccccc----- Q lcl|Aclame:pro 182 GLERGLSLMESLKSTIFSEDSSRNATAAMWKNAGRPNLVLRHEK-RLSPEAQQRLREQFDRAHAG----SSNTGK----- 251 (518) Q Consensus 182 ~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~p~gil~~~~-~~~~e~~~~~~~~~~~~~~g----~~n~g~----- 251 (518) +..+ +|-|..|...+....-++...--+==.-+.-+-|+.++- .+.+..+++..+.+-..|.. ..+.|. T Consensus 240 ~~~i-~syLhkAiKp~NQLkm~EDAlVIYRitRAPeRRvFYIDvGnlPk~KAeqYl~~im~k~kNklvYDa~TGev~ddr 318 (516) T protein:vir:10 240 DRGI-IGYLHNAVKPANQLKLLEDAMVIYRITRAPERRVFYIDVGNMNNRKATEYVNGIMQSLKNRVVYDSNTGTVKNQK 318 (516) T ss_pred CCce-eeeehhhhHhHHhhHHHHhhHHHHhhhccccceEEEEecCCCCchhHHHHHHHHHHhcCceeEEeCCCCeeccch Confidence 4343 788888888887777777654433223333344554442 23333333333333332211 111121 Q ss_pred -cee-c-----c-----CCcccccccCChhhHHHHHHHHHHHHHHHHHhccchHhhcccccccc--ccHHHHHH--HHHH Q lcl|Aclame:pro 252 -TMV-V-----E-----EGMEPIPLQLTAVEMQFIEARQLNREEVCGVYDIAPPIVHILDRATF--SNISAQMR--AFYR 315 (518) Q Consensus 252 -~~v-l-----~-----~g~~~~~~~~~~~d~q~~e~~~~~~~~Ia~~fgVpp~~lg~~~~~~~--s~~e~~~~--~~~~ 315 (518) .+- + + .|.+++.+... +.+.-++-.++..+.+.++++||.+-++..+..+. +...+-.+ .-.. T Consensus 319 k~msMlEDyWLpRReGgrgTEItTLpGg-qnlgem~DV~YF~kkLy~aLnVP~sRl~~e~~~~~~~Gr~~EItRDEiKF~ 397 (516) T protein:vir:10 319 RNLSMTEDYWLMRRDGKSVTEVSSLPGA-QTMGDMDDVRWFNKKLYEALRIPLSRIPRDDGGMVIGGQDTAITRDELDFR 397 (516) T ss_pred hhhhhHhhhcccccCCCCccceeecccc-CCcChHHHHHHHHHHHHHHhCCCcccccCCCCceeeccccchhhHHHHHHH Confidence 111 1 1 23444444322 22333344556678899999999999875333221 22222211 1122 Q ss_pred HHHHHHHHHHHHHHHhhh---------cch--hh---ccceeeechhh----hhccC-HHHHHHHHHHHH--hCCCcCHH Q lcl|Aclame:pro 316 DTMAIPIARIQSAMDKYV---------GQY--WV---RKNRMKFDIDD----VIQPD-WEAKSESTQKMV--NSGVATPN 374 (518) Q Consensus 316 ~~l~P~~~~ie~~ln~~l---------~~~--~~---~~~~~~fd~~~----l~~~d-~~~~~~~~~~~~--~~g~~T~N 374 (518) .-|.-+..++...+...| ++. +. ....+.|..+. +.... ...|...+..+- -..+++.+ T Consensus 398 KFI~rLR~rFs~lf~~~L~~qLilKgiit~eew~~i~~~I~~~f~~Dn~f~ElKe~Eil~~R~~~l~~~dpyvGky~s~~ 477 (516) T protein:vir:10 398 KFVVQLQHDFEEIFLDPLKTNLIYKRIITEDEWDEQINNIKVNFHQDSYYTELKDIETLRLRVDALSQIEPYVGKYVSHD 477 (516) T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhccCCCHHHHHHHhhcceEEeeecchHHHHHHHHHHHHHHHHHHHhhhhhccccchH Confidence 223334444444433332 121 11 12233333222 11111 123333333332 23456666 Q ss_pred HHHHH-HhCCCCCCccCceeeecccccccccccccCCCCCCCCCCCCcccCCCCCccCCc Q lcl|Aclame:pro 375 EGREI-MGLPRSDDPKADELYANSALQPLGATPDGAVEGEEAPAPKRPASTPVASLDQSP 433 (518) Q Consensus 375 E~R~~-~g~~pi~~~~gD~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 433 (518) =+|+. |.+.--+-+.-++. +.. ....+--+.| ++.++- T Consensus 478 yi~k~ILr~tDeei~~e~k~--------I~~-------E~~~~~~~~p------~~~~~f 516 (516) T protein:vir:10 478 YVMKNILQMTEEQIAQEEKQ--------IEQ-------EAGIKRFQNP------ENEDDF 516 (516) T ss_pred HHHHHHhcCCHhhHHHHHHH--------HHH-------hhhCCCCCCC------CccccC Confidence 56543 44432110000000 000 0000000000 000111 No 235 >protein:vir:101189 Length: 516 # NCBI annotation: portal vertex protein of head # Family: family:all:1036 # MgeID: mge:1582 # MgeName: 44RR2.8t # Cross-refs: genbank:acc:NP_932511;genbank:gi:37651637;genbank:GeneID:2610682 Probab=89.73 E-value=0.025 Score=29.40 Aligned_cols=405 Identities=8% Similarity=0.036 Sum_probs=166.6 Q ss_pred CCCCCCC----------------CCccccccccchhhhh-----hhccCccCCc-------ccCccchhhHHHHhhhHHH Q lcl|Aclame:pro 1 MLLANGQ----------------TLSAPAMAELSPQMQD-----SYYYAPAVGM-------QLERQFSLYGGIYKNQPWV 52 (518) Q Consensus 1 ~~f~~~~----------------~~~~~~~~~~~~~~~~-----~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~v 52 (518) -|||... +..+|.....+..+.. .+++.-+..+ ........|+++ +.+|-| T Consensus 5 ~lf~f~~~~d~~~~~~~~~~~~~s~~~p~~~dGa~~i~~~~~~~~~~g~~~~~~~~~~~~~~~~eLI~~YR~m-a~~pEv 83 (516) T protein:vir:10 5 DLFKFWDRVDQNEYDERLKLGHESIATPKKDDGATEIETREGEATYNAVMQQFFGIDNNISGTKDLINTYRQL-INNPEV 83 (516) T ss_pred HhcccccchhhhHHhhhhcCCcCcccCCCCCCCceeeecCCCcccccceeeeeeccccccchHHHHHHHHHHH-hhccch Confidence 3565511 1111111111110100 0111100000 011122334555 688999 Q ss_pred HHHHHHHHHhhcc-----CceEEEEecCCceee---ecchHHHHHhhccCccCCHHHHHHHHHHHHHHcCCeeEEeeeC- Q lcl|Aclame:pro 53 RTVIAKRAQALAR-----LPVKCMFTSGDTETE---EHDTGYAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQKN- 123 (518) Q Consensus 53 ~~~v~~ia~~ia~-----lp~~v~~~~~~~~~~---~~~~~~~~l~~~PN~~~t~~~f~~~~~~~~ll~G~~~~~i~~~- 123 (518) ..||+-|.+.+.- -|..|--.+-+-... .....+..++.--+-...++++ ++.+++.|..|..++-+ T Consensus 84 d~Av~eIVneaiv~d~~~~pV~l~L~~~~~s~~ik~kI~eeF~~Il~ll~F~~~~~~~----fR~WYVDgRi~fhKiid~ 159 (516) T protein:vir:10 84 ERAVANIVNEAIVYERGHKVVSLDLDDTDFGSNVKEKILEEFDEVCRLLDASRKLDTL----FRRWYVDSRIFFHKIMPN 159 (516) T ss_pred hhHHHHhhcceeEecCCCceEEEEecccCcchHHHHHHHHHHHHHHHHhccchhhhHH----HhhhhhcceEEEEEEecC Confidence 9999999988753 233332221110011 1111222233333344455554 45567899999886554 Q ss_pred CCCceeeeeeeCCcceEEEecc-----Ccce------EEEEeeccC---------CCCceeEEEeeeeeEEee--cCCCC Q lcl|Aclame:pro 124 KSGTPEKLMPMHPSRVAIKRNS-----RTGR------YEYYFQAGA---------GVGTQLVSFADDEVVPIR--FFNPD 181 (518) Q Consensus 124 ~~G~~~~l~~l~p~~v~~~~~~-----~~~~------~~~~~~~~~---------~~~~~~~~~~~~~vih~~--~~~~~ 181 (518) .+..+.+|..|+|..++.++.- .+.. .+|.|.... ...+.+++++.+-|.|.. ..+.+ T Consensus 160 ~k~GI~Elr~lDPr~i~~vR~i~~~~~~~~~v~~~~~e~~~Y~~~~~~~~~~g~~~~~~~~ikI~~dAI~y~hSGL~d~~ 239 (516) T protein:vir:10 160 PKKGIAELRRLDPRFMEYYREIVTSDIGGTTIVKGYREFFIYTTGNEGYSYNGRIFEPNTRIKIPRSAVVYASSGLMDCS 239 (516) T ss_pred ccccceeeeeeCCcceeeEeeecccccccchhhhhhhheeeeccCccccccccceeCCCcceeechhheeeecccceeCC Confidence 3456899999999998865432 1111 223222111 112345667666665554 22333 Q ss_pred cccccchHHHHHHHHHHHHHHHHHHHHHHHHccCCcceeeeeCC-cCCHHHHHHHHHHHHHHhcC----cccccc----- Q lcl|Aclame:pro 182 GLERGLSLMESLKSTIFSEDSSRNATAAMWKNAGRPNLVLRHEK-RLSPEAQQRLREQFDRAHAG----SSNTGK----- 251 (518) Q Consensus 182 ~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~p~gil~~~~-~~~~e~~~~~~~~~~~~~~g----~~n~g~----- 251 (518) +..+ +|-|..|...+....-++...--+==.-+.-+-|+.++- .+.+..+++..+.+-..|.. ..+.|. T Consensus 240 ~~~i-~syLhkAiKp~NQLkm~EDAlVIYRitRAPeRRvFYIDvGnlPk~KAeqYl~~im~k~kNklvYDa~TGev~ddr 318 (516) T protein:vir:10 240 DRGI-IGYLHNAVKPANQLKLLEDAMVIYRITRAPERRVFYIDVGNMNNRKATEYVNGIMQSLKNRVVYDSNTGTVKNQK 318 (516) T ss_pred CCce-eeeehhhhHhHHhhHHHHhhHHHHhhhccccceEEEEecCCCCchhHHHHHHHHHHhcCceeEEeCCCCeeccch Confidence 4343 788888888887777777654433223333344554442 23333333333333332211 111121 Q ss_pred -cee-c-----c-----CCcccccccCChhhHHHHHHHHHHHHHHHHHhccchHhhcccccccc--ccHHHHHH--HHHH Q lcl|Aclame:pro 252 -TMV-V-----E-----EGMEPIPLQLTAVEMQFIEARQLNREEVCGVYDIAPPIVHILDRATF--SNISAQMR--AFYR 315 (518) Q Consensus 252 -~~v-l-----~-----~g~~~~~~~~~~~d~q~~e~~~~~~~~Ia~~fgVpp~~lg~~~~~~~--s~~e~~~~--~~~~ 315 (518) .+- + + .|.+++.+... +.+.-++-.++..+.+.++++||.+-++..+..+. +...+-.+ .-.. T Consensus 319 k~msMlEDyWLpRReGgrgTEItTLpGg-qnlgem~DV~YF~kkLy~aLnVP~sRl~~e~~~~~~~Gr~~EItRDEiKF~ 397 (516) T protein:vir:10 319 RNLSMTEDYWLMRRDGKSVTEVSSLPGA-QTMGDMDDVRWFNKKLYEALRIPLSRIPRDDGGMVIGGQDTAITRDELDFR 397 (516) T ss_pred hhhhhHhhhcccccCCCCccceeecccc-CCcChHHHHHHHHHHHHHHhCCCcccccCCCCceeeccccchhhHHHHHHH Confidence 111 1 1 23444444322 22333344556678899999999999875333221 22222211 1122 Q ss_pred HHHHHHHHHHHHHHHhhh---------cch--hh---ccceeeechhh----hhccC-HHHHHHHHHHHH--hCCCcCHH Q lcl|Aclame:pro 316 DTMAIPIARIQSAMDKYV---------GQY--WV---RKNRMKFDIDD----VIQPD-WEAKSESTQKMV--NSGVATPN 374 (518) Q Consensus 316 ~~l~P~~~~ie~~ln~~l---------~~~--~~---~~~~~~fd~~~----l~~~d-~~~~~~~~~~~~--~~g~~T~N 374 (518) .-|.-+..++...+...| ++. +. ....+.|..+. +.... ...|...+..+- -..+++.+ T Consensus 398 KFI~rLR~rFs~lf~~~L~~qLilKgiit~eew~~i~~~I~~~f~~Dn~f~ElKe~Eil~~R~~~l~~~dpyvGky~s~~ 477 (516) T protein:vir:10 398 KFVVQLQHDFEEIFLDPLKTNLIYKRIITEDEWDEQINNIKVNFHQDSYYTELKDIETLRLRVDALSQIEPYVGKYVSHD 477 (516) T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhccCCCHHHHHHHhhcceEEeeecchHHHHHHHHHHHHHHHHHHHhhhhhccccchH Confidence 223334444444433332 121 11 12233333222 11111 123333333332 23456666 Q ss_pred HHHHH-HhCCCCCCccCceeeecccccccccccccCCCCCCCCCCCCcccCCCCCccCCc Q lcl|Aclame:pro 375 EGREI-MGLPRSDDPKADELYANSALQPLGATPDGAVEGEEAPAPKRPASTPVASLDQSP 433 (518) Q Consensus 375 E~R~~-~g~~pi~~~~gD~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 433 (518) =+|+. |.+.--+-+.-++. +.. ....+--+.| ++.++- T Consensus 478 yi~k~ILr~tDeei~~e~k~--------I~~-------E~~~~~~~~p------~~~~~f 516 (516) T protein:vir:10 478 YVMKNILQMTEEQIAQEEKQ--------IEQ-------EAGIKRFQNP------ENEDDF 516 (516) T ss_pred HHHHHHhcCCHhhHHHHHHH--------HHH-------hhhCCCCCCC------CccccC Confidence 56543 44432110000000 000 0000000000 000111 No 236 >protein:vir:103177 Length: 533 # NCBI annotation: gp131 # Family: family:all:1036 # MgeID: mge:1583 # MgeName: Syn9 # Cross-refs: genbank:acc:YP_717798;genbank:gi:113200635;genbank:GeneID:4239186 Probab=87.44 E-value=0.039 Score=28.32 Aligned_cols=418 Identities=11% Similarity=0.070 Sum_probs=161.4 Q ss_pred CCCCCCCCC-----ccccccccchhhhh-hhccCccCCc--ccCc-------cchhhHHHHhhhHHHHHHHHHHHHhhcc Q lcl|Aclame:pro 1 MLLANGQTL-----SAPAMAELSPQMQD-SYYYAPAVGM--QLER-------QFSLYGGIYKNQPWVRTVIAKRAQALAR 65 (518) Q Consensus 1 ~~f~~~~~~-----~~~~~~~~~~~~~~-~~~~~~~~~~--~~~~-------~~~~~~~~~~~~~~v~~~v~~ia~~ia~ 65 (518) -|||-+-.. .+++.......=+. ...+....|. .+.. ....|++ ...+|-|..||+-|.+.+.- T Consensus 3 ~lfg~~i~~~~~~~~~~s~~~~~~~dg~~~i~~~~~~~~~~~~e~~~~~~~eLI~~YR~-ma~~pEvd~Av~eIVneaiv 81 (533) T protein:vir:10 3 QLFGFSLERAKKAPKGPSFVQKDNLDGSQPVSGGGYYGYTVDFDGQVRNEYQLISRYRE-MVLQPECDSAVDDIVNETIC 81 (533) T ss_pred cccccccccccccccCCCCCCCCcccccceeecccccceeeecccccchHHHHHHHHHH-HhhccchhhHHHHhhcceee Confidence 577754332 23222111110000 0000001111 1111 1122333 34789999999999988753 Q ss_pred C-----ceEEEEecCCceee---ecchHHHHHhhccCccCCHHHHHHHHHHHHHHcCCeeEEeeeCCC---Cceeeeeee Q lcl|Aclame:pro 66 L-----PVKCMFTSGDTETE---EHDTGYAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQKNKS---GTPEKLMPM 134 (518) Q Consensus 66 l-----p~~v~~~~~~~~~~---~~~~~~~~l~~~PN~~~t~~~f~~~~~~~~ll~G~~~~~i~~~~~---G~~~~l~~l 134 (518) . |..|--.+-+-... .....+..++.--+-...++++ ++.|++.|..|..++-+.+ ..+.+|..| T Consensus 82 ~d~~~~pV~i~Ld~~~~s~~iK~kI~eEF~~Il~ll~F~~~~~e~----fR~WYVDgRi~fHkiid~~~pk~GI~ELr~l 157 (533) T protein:vir:10 82 GNFDDVPVSVELSNLKVSDKIKKLIREEFGEILRLLDFENRSYEI----FRRWYVDGRLFYHKVIDPDNPQGGLIELRYI 157 (533) T ss_pred ecCCCceEEEEecccccchHHHHHHHHHHHHHHHHhccchhhhHH----HhhhhhcceEEEEEEecCCCccccceeeeec Confidence 2 33332211110111 1111222233333334444554 4556789999988866633 468999999 Q ss_pred CCcceEEEecc-----Ccc-------------eEEEEeeccC--CCCceeEEEeeeeeEEeecCCCC--cccccchHHHH Q lcl|Aclame:pro 135 HPSRVAIKRNS-----RTG-------------RYEYYFQAGA--GVGTQLVSFADDEVVPIRFFNPD--GLERGLSLMES 192 (518) Q Consensus 135 ~p~~v~~~~~~-----~~~-------------~~~~~~~~~~--~~~~~~~~~~~~~vih~~~~~~~--~~~~G~s~~~~ 192 (518) +|..|+.++.. ++. ..+|.|...+ ..++..++++.+-| ++-+...- +...=+|-|.. T Consensus 158 DPr~i~~vr~i~~~~~~~~~~~~~~~~v~~~~~eyf~Ynp~g~~~~~~~~vkI~~dAI-~y~hSGl~d~~~~~i~syLhk 236 (533) T protein:vir:10 158 DPRKIRKINETEQKRPEQLRGLPLNQQLSPKSAEYFLYDPKGLKNSTTQGLKIAPDSI-CYVHSGIMDLNKNMTLSHLHK 236 (533) T ss_pred cccceeeeeeeeccCCCccceeecchhhhccceeeeeeccccccccCCCceecchhhe-eeeeccceeCCCCceeccchH Confidence 99999874321 111 1122222111 11234466766444 44332221 11123677888 Q ss_pred HHHHHHHHHHHHHHHHHHHHccCCcceeeeeCC-cCCHHHHHHHHHHHHHHhcC----ccccc------ccee-c----- Q lcl|Aclame:pro 193 LKSTIFSEDSSRNATAAMWKNAGRPNLVLRHEK-RLSPEAQQRLREQFDRAHAG----SSNTG------KTMV-V----- 255 (518) Q Consensus 193 ~~~~i~~~~~~~~~~~~~~~ng~~p~gil~~~~-~~~~e~~~~~~~~~~~~~~g----~~n~g------~~~v-l----- 255 (518) |...+....-++....-+==.-+.-+-|+.++- .+.+..+++..+.+-..|.. ....| +.+- + T Consensus 237 AiKp~NQLkm~EDAlVIYRitRAPeRRvFYIDVGnLPk~KAeqYlr~iM~k~KNklVYDa~TGev~ddrk~msMlEDyWL 316 (533) T protein:vir:10 237 AIKAVNQLRMIEDSLVIYRLSRAPERRIFYIDVGNLPKNKAEQYLREVMGRYRNKLVYDANTGEIKDDKKFMSMLEDFWL 316 (533) T ss_pred hHHHHHhhHHHHhhHHHHhhhccccceEEEEecCCCCchhHHHHHHHHHHhccceEEEeccCceecccchhhhhHhhhcc Confidence 888877777777654433223333344554442 23333333333333333321 00111 1111 1 Q ss_pred c-----CCcccccccCChhhHHHHHHHHHHHHHHHHHhccchHhhccccccccccHHHHH---HHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 256 E-----EGMEPIPLQLTAVEMQFIEARQLNREEVCGVYDIAPPIVHILDRATFSNISAQM---RAFYRDTMAIPIARIQS 327 (518) Q Consensus 256 ~-----~g~~~~~~~~~~~d~q~~e~~~~~~~~Ia~~fgVpp~~lg~~~~~~~s~~e~~~---~~~~~~~l~P~~~~ie~ 327 (518) + .|.+++.+... +.+.-++-.++..+.+.++++||.+-|+..+.-+.....+-. ..|. .-|.-+..++.. T Consensus 317 PRReGgrgTEItTLpGg-qnLgem~DV~YF~kKLY~aLnVP~SRl~~e~~f~~Gr~~EItRDEiKF~-KFI~RLR~rFs~ 394 (533) T protein:vir:10 317 PRREGGRGTEITTLPGG-QNLGELEDVKYFQKKLYKSLNVPGSRLETETTFNVGRAAEITRDEVKFQ-KFVARLRKRFSE 394 (533) T ss_pred cccCCCCccceeecccc-CCcChHHHHHHHHHHHHHHhCCCccccCCCCcccccccchhhHHHHHHH-HHHHHHHHHHHH Confidence 1 23444444322 223333445666788999999999998754332222222211 1222 223333344443 Q ss_pred HHHhhh---------cch--hh---ccceeeechhh----hhccC-HHHHHHHHHHH--HhCCCcCHHHHHHH-HhC--- Q lcl|Aclame:pro 328 AMDKYV---------GQY--WV---RKNRMKFDIDD----VIQPD-WEAKSESTQKM--VNSGVATPNEGREI-MGL--- 382 (518) Q Consensus 328 ~ln~~l---------~~~--~~---~~~~~~fd~~~----l~~~d-~~~~~~~~~~~--~~~g~~T~NE~R~~-~g~--- 382 (518) .+...| ++. +. ....+.|..+. +.... ...|+..+..+ +-.-.++.+=+|+. |.+ T Consensus 395 lF~~~Lk~qLiLKgiit~eeW~~i~~~I~~~f~~Dn~f~ElKe~Eil~~Rl~~l~~~dpyvGky~S~dyi~k~ILr~tDe 474 (533) T protein:vir:10 395 LFTDLLKTQLVLKGVISIEEWDQMKEHIQYDYIADNYFAELKEIEIRNERMNQVATMDPFVGKYFSVEYMRRQVLKQTDV 474 (533) T ss_pred HHHHHHHHhhhhccCCCHHHHHHHhhcceEeeeecchHHHHHHHHHHHHHHHHHHHhhhhhccccchHHHHHHHhccCHH Confidence 333322 121 11 12233333222 11111 12233333322 11113344434332 222 Q ss_pred ---------------CCCCCccCceeeecccccccccccccCCCCCCCCCCCCcccCCCCCccCCccccccccChhhhcc Q lcl|Aclame:pro 383 ---------------PRSDDPKADELYANSALQPLGATPDGAVEGEEAPAPKRPASTPVASLDQSPPASVPGLSPTNSDR 447 (518) Q Consensus 383 ---------------~pi~~~~gD~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 447 (518) +...+|..+.- |.+ . ..+|.....+.++..+....++++. .+. T Consensus 475 ei~~~~kqI~~E~k~~~~~~p~~~~~--~~~-----~-------------~~~~~~~~~~~~~~~~~~~~~~~~~-~~~- 532 (533) T protein:vir:10 475 EMKEIDKQIESEMESGIIADPAAEMD--PAM-----A-------------AGDPDAGGAPAEEVAPEGPDPSDER-KAE- 532 (533) T ss_pred HHHHHHHHHHHHHhCCCCCCCcchhh--HHh-----c-------------CCCCCcCCcccccCCCCCCCcchhh-ccC- Confidence 22222211100 000 0 0000000000000000000000000 000 Q ss_pred hh Q lcl|Aclame:pro 448 ST 449 (518) Q Consensus 448 ~~ 449 (518) . T Consensus 533 -~ 533 (533) T protein:vir:10 533 -F 533 (533) T ss_pred -C Confidence 0 No 237 >protein:vir:102668 Length: 547 # NCBI annotation: Hypothetical protein # Family: family:all:481 # MgeID: mge:1624 # MgeName: VP2 # Cross-refs: genbank:acc:YP_024419;genbank:gi:48696640;genbank:GeneID:2948135 Probab=86.79 E-value=0.043 Score=28.07 Aligned_cols=390 Identities=11% Similarity=0.040 Sum_probs=144.3 Q ss_pred CC--CCCCCCCccccccccchhhhhhhccCccCCcccCccchhhHHHHhhhHHHHHHHHHHHHhh-c-cCceEEEEecCC Q lcl|Aclame:pro 1 ML--LANGQTLSAPAMAELSPQMQDSYYYAPAVGMQLERQFSLYGGIYKNQPWVRTVIAKRAQAL-A-RLPVKCMFTSGD 76 (518) Q Consensus 1 ~~--f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~v~~ia~~i-a-~lp~~v~~~~~~ 76 (518) .. |........... + .+....+..... -.+......+...+ . .-||.=....+. T Consensus 34 ~~~~~~~~~~~~~~~~--------------~---~~~~~i~dst~~-----~a~~~Las~L~~~ltPp~~~WF~l~~~d~ 91 (547) T protein:vir:10 34 MRSDFFSDLRSEGSIN--------------W---NQNREVFDSTAG-----DGLETLSSSLHGSLTSPATKWFELAFRDK 91 (547) T ss_pred cccccccCCCCCcccc--------------c---ccccccccchHH-----HHHHHHHHHHHHhhcCCCCcccccccCCc Confidence 11 111110000000 0 000000000000 12223333333333 1 334422111111 Q ss_pred -ceee--e------cchHHHHHhhccCccCCHHHHHHHHHHHHHHcCCeeEEeeeCCC-CceeeeeeeCCcceEEEeccC Q lcl|Aclame:pro 77 -TETE--E------HDTGYAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQKNKS-GTPEKLMPMHPSRVAIKRNSR 146 (518) Q Consensus 77 -~~~~--~------~~~~~~~l~~~PN~~~t~~~f~~~~~~~~ll~G~~~~~i~~~~~-G~~~~l~~l~p~~v~~~~~~~ 146 (518) .... . -...++..+.+-| ++.-+..+..+++++||+.+++..+.+ ...+.+..++..++.+..+.. T Consensus 92 ~~~~~~~v~~~L~~ve~~i~~~l~~sn----f~~~~~~~~~~L~~~G~a~l~~~~d~~~~~~~r~~~~pl~~~~v~~d~~ 167 (547) T protein:vir:10 92 ELNSDDECRKWLENATHDVYSALQDSN----FNLEANETYIDLCGYGNAIMVEEEDEDEEGSVVFQSSPIQDSYFEEDSR 167 (547) T ss_pred cccchHHHHHHHHHHHHHHHHHHHhcC----cHHHHHHHHHHHHhHCcEeEEeccCCCCCCceeEEEeecceEEEeeCCC Confidence 0000 0 0111223333333 334455667889999999988866532 223445555556666666655 Q ss_pred cceEE-EE-------------------------------------------eeccCCCCc--------------eeEE-- Q lcl|Aclame:pro 147 TGRYE-YY-------------------------------------------FQAGAGVGT--------------QLVS-- 166 (518) Q Consensus 147 ~~~~~-~~-------------------------------------------~~~~~~~~~--------------~~~~-- 166 (518) |.... |+ +.......+ ..+. T Consensus 168 G~v~~i~r~~~~t~~qi~~~fg~~~l~~~v~~~~~~~~~~~~~~~~v~~~v~~~~~~~~~~~~~~~~~~~~~p~~s~~~e 247 (547) T protein:vir:10 168 GQVVNFYRVFRWTPAQIYDRFGDEGTPEAIIKKAKEASNQAALKQEVVMCVFTRYDKKQNRNAGTVLAPTERPFGKKWIL 247 (547) T ss_pred cCeeeeeeeeeccHHHHHHhcCcccCCHHHHHHHhcCCCcccceEEEEEEEeeccCCCCCccccceeeccccceeEEEEE Confidence 53211 10 000000000 0000 Q ss_pred ------------EeeeeeEEeecCCCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHccCCcceeeeeCCcCCHHHHHH Q lcl|Aclame:pro 167 ------------FADDEVVPIRFFNPDGLERGLSLMESLKSTIFSEDSSRNATAAMWKNAGRPNLVLRHEKRLSPEAQQR 234 (518) Q Consensus 167 ------------~~~~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~p~gil~~~~~~~~e~~~~ 234 (518) |.....+.+|....++..||.||.+.+...+.....+.+.......-...|.+.+..+.-..+ T Consensus 248 ~~~~~~~l~esg~~e~P~~~~Rw~~~~ge~YGrgp~~~~l~D~k~L~~l~~~~l~~~~~~~~pp~~v~~~g~~~~----- 322 (547) T protein:vir:10 248 KEGAVQLGEEGGYYEMPAYAIRWRKSAGSQWGFGPSHLALPDVLTANRYVELVLRSSEKVIDPAIMVTERGLISD----- 322 (547) T ss_pred ecCceeeeecCCcccCCeeeeeeeecCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHHhcCceeccccccccc----- Confidence 111234555666667888999999999999999999999888888888888765442222211 Q ss_pred HHHHHHHHhcCccccccceeccCCcccccccCChhhHHH-HHHHHHHHHHHHHHhccchHhhccccccccccHHHHHHH- Q lcl|Aclame:pro 235 LREQFDRAHAGSSNTGKTMVVEEGMEPIPLQLTAVEMQF-IEARQLNREEVCGVYDIAPPIVHILDRATFSNISAQMRA- 312 (518) Q Consensus 235 ~~~~~~~~~~g~~n~g~~~vl~~g~~~~~~~~~~~d~q~-~e~~~~~~~~Ia~~fgVpp~~lg~~~~~~~s~~e~~~~~- 312 (518) ++ . ..|++.+..+.-.++++...+ +.+. .+..+.....|-.+|-++...+-..+..|-.-+ ..... T Consensus 323 ----~~---~---~pgg~~~~~~~~~v~pl~~~~-~~~~~~~~i~~~~~rI~~af~~d~~~~~~~~~~TAtEV-~~r~~E 390 (547) T protein:vir:10 323 ----ID---L---GASGLTVVRDMESMKPFESRA-RFDVSSIQLTDLRSAVRRIYYVDQLQMKDSPAMTATEV-QVRYEL 390 (547) T ss_pred ----ce---e---cCCeeeecCCcccceeeeccc-chHHHHHHHHHHHHHHHHHhhhhhhhcCCCccccHHHH-HHHHHH Confidence 11 1 124555555555666665543 3333 456666778888888776544433332221111 11222 Q ss_pred -----------HHHHHHHHHHHHHHHHHHhh-hcchhhcc------ceeeech-hhhhcc----CHHHHHHHHHHHHh-C Q lcl|Aclame:pro 313 -----------FYRDTMAIPIARIQSAMDKY-VGQYWVRK------NRMKFDI-DDVIQP----DWEAKSESTQKMVN-S 368 (518) Q Consensus 313 -----------~~~~~l~P~~~~ie~~ln~~-l~~~~~~~------~~~~fd~-~~l~~~----d~~~~~~~~~~~~~-~ 368 (518) +...-+.|++.+.-..+.+. ++|+.... ..+++.. +.|-+. +.......+...-. . T Consensus 391 ~~~~LG~v~~rl~~E~l~Pli~r~~~il~r~g~lP~~p~~l~~~~~~~~~v~~is~Laraq~~~~~~~i~~~~~~v~~la 470 (547) T protein:vir:10 391 MQRLLGPTLGRLENDFLSPMIQRTFNIRFRAGKLGELPSKLLESGKAAMDIVYTGPLSRAQKIDQAASIERWAGSTAQLA 470 (547) T ss_pred HHHHhhHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCchhhhccCcceEEEEeccHHHHHHHHHHHHHHHHHHHHHHHhh Confidence 33344455544443333332 33332111 1122221 122111 11111111111100 0 Q ss_pred C-------CcCHHHHH----HHHhCCCCCCccCceeeecccccccccccccCCCCCC-CCCCCCcccCCCCCccCCcccc Q lcl|Aclame:pro 369 G-------VATPNEGR----EIMGLPRSDDPKADELYANSALQPLGATPDGAVEGEE-APAPKRPASTPVASLDQSPPAS 436 (518) Q Consensus 369 g-------~~T~NE~R----~~~g~~pi~~~~gD~~~~~~n~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 436 (518) + .+..+++- +.+|.|+. .+..+.....+-.........+. ++.. +.........+ ...+. T Consensus 471 q~~P~vld~id~d~~~~~~a~~~Gvp~~------~irs~eev~~~r~qr~~~~q~~~qaa~~-~~~g~~m~~~~-~~~a~ 542 (547) T protein:vir:10 471 EINPEVLDIPDWDEMVRMLGSLLGAPQT------LMRPKAKVTSIRKNRSQTQQKAEQAAIA-EAEGNAMEAQG-KGQAA 542 (547) T ss_pred ccChhhhhcCCHHHHHHHHHHHhCCChh------ccCCHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHhhc-Ccccc Confidence 1 12233322 22333211 00000000000000000000000 0000 00000000000 00000 Q ss_pred ccccChhhh Q lcl|Aclame:pro 437 VPGLSPTNS 445 (518) Q Consensus 437 ~~~~~~~~~ 445 (518) .. .+. T Consensus 543 ~~----~~~ 547 (547) T protein:vir:10 543 LK----ENQ 547 (547) T ss_pred hh----ccC Confidence 00 000 No 238 >protein:vir:108049 Length: 524 # NCBI annotation: gp20 portal vertex protein of head # Family: family:all:1036 # MgeID: mge:2002 # MgeName: JS98 # Cross-refs: genbank:acc:YP_001595296;genbank:gi:161622602;genbank:GeneID:5783768 Probab=86.58 E-value=0.045 Score=27.99 Aligned_cols=407 Identities=10% Similarity=0.050 Sum_probs=161.8 Q ss_pred CCCCCCCC----------------CccccccccchhhhhhhccCccCC------cccC-------ccchhhHHHHhhhHH Q lcl|Aclame:pro 1 MLLANGQT----------------LSAPAMAELSPQMQDSYYYAPAVG------MQLE-------RQFSLYGGIYKNQPW 51 (518) Q Consensus 1 ~~f~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~------~~~~-------~~~~~~~~~~~~~~~ 51 (518) -|||.... ..+|.....+..+.......+..+ +.+. .....|+++ +.+|- T Consensus 9 ~lf~f~~~~de~~~~~~~~~~~~S~~~p~~~dGa~~I~~~~~~~~~~~~~q~~y~~~e~~~~~~~eLI~~YR~m-a~~pE 87 (524) T protein:vir:10 9 SFLKPWANEDEKEYKQQINNNLESVTAPKLDDGAREIETQEQNIPYNALMQQMFGSNEPEVKNTRELIDTYRNL-MNNYE 87 (524) T ss_pred HHhhhhhcchhhhhhhhhccCCCccccCCCCCCceeeccCcccccchhhhhhhhhcccchhhhHHHHHHHHHHH-hhccc Confidence 34444211 111111111100100000000000 0011 112334554 68899 Q ss_pred HHHHHHHHHHhhcc-----CceEEEEecCCceee---ecchHHHHHhhccCccCCHHHHHHHHHHHHHHcCCeeEEeeeC Q lcl|Aclame:pro 52 VRTVIAKRAQALAR-----LPVKCMFTSGDTETE---EHDTGYAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQKN 123 (518) Q Consensus 52 v~~~v~~ia~~ia~-----lp~~v~~~~~~~~~~---~~~~~~~~l~~~PN~~~t~~~f~~~~~~~~ll~G~~~~~i~~~ 123 (518) |..||+-|.+.+.- -|..|--.+-+-... .....+..++.--+-...++++ ++.+++.|..|..++-+ T Consensus 88 vd~Av~eIVneaiv~d~~~~pV~l~Ld~~~~s~siK~kI~eeF~~Il~ll~F~~~~~~~----fR~WYVDgRi~fHkiid 163 (524) T protein:vir:10 88 VDNAVQEIVSDAIVYEDDKEVVALNLDGTDFSQSIKDKILAEFSEVLNLLNFQRKGTDH----FQRWYVDSRIFFHKIIN 163 (524) T ss_pred hhhHHHHhhcceeEecCCCceEEEEecccCcchHHHHHHHHHHHHHHHHhccchhhhHH----HhhheeeceEEEEEEee Confidence 99999999988753 233332222111111 1111222233333334445554 45567899999988665 Q ss_pred C---CCceeeeeeeCCcceEEEec----cCcc-------eEEEEeeccC---------CCCceeEEEeeeeeEEeecCCC Q lcl|Aclame:pro 124 K---SGTPEKLMPMHPSRVAIKRN----SRTG-------RYEYYFQAGA---------GVGTQLVSFADDEVVPIRFFNP 180 (518) Q Consensus 124 ~---~G~~~~l~~l~p~~v~~~~~----~~~~-------~~~~~~~~~~---------~~~~~~~~~~~~~vih~~~~~~ 180 (518) . ...+.+|..|+|..++.++. .+++ ..+|.|.... ...+..++++.+.|.|....-. T Consensus 164 ~~~pk~GI~Elr~lDPr~i~~vr~i~~~~~~~~~vi~~~~e~f~Y~~~~~~~~~~~~~~~~~~~ikI~~dAIvy~~SGL~ 243 (524) T protein:vir:10 164 PKKMKDGVQELRRLDPRQVQYIREIVTRMEDGVKIVDGYREFFVYDTGHESYCADGRIYSAGTKVKIPRAAVVYAHSGLL 243 (524) T ss_pred CCCccccceeeeeeCCccceeeeeecccCcccchhhcchhhheeecCCCcccccCcceecCCcceecchhheeeeccCcc Confidence 3 23689999999999976322 1111 1122222111 1234567888999988764322 Q ss_pred C-cccccchHHHHHHHHHHHHHHHHHHHHHHHHccCCcceeeeeCC-cCCHHHHHHHHHHHHHHhcC----------ccc Q lcl|Aclame:pro 181 D-GLERGLSLMESLKSTIFSEDSSRNATAAMWKNAGRPNLVLRHEK-RLSPEAQQRLREQFDRAHAG----------SSN 248 (518) Q Consensus 181 ~-~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~p~gil~~~~-~~~~e~~~~~~~~~~~~~~g----------~~n 248 (518) + +...=+|-|..|...+....-++...--+==.-+.-+-|+.++- .+.+..+++..+.+-..+.. ..+ T Consensus 244 d~~~~~i~syLhkAiKp~NQLkm~EDAlVIYRitRAPeRRvFYIDVGnlPk~KAeqYl~~im~k~kNKlvYDa~TGev~d 323 (524) T protein:vir:10 244 DCCGKNIIGYLQRAIKPANQLKLMEDAMVIYRITRAPDRRVFYIDTGNMPSRKAAAQMQHIMNTMKNRVVYDASTGKIKN 323 (524) T ss_pred cCCCCceeccchHhhHHHHhhHHHHhhHHHHhhhccccceEEEEecCCCCchhHHHHHHHHHHhcCceeEEeccCCeecc Confidence 2 11123677888888777777776654433223333344554442 23333333333333322211 111 Q ss_pred ccccee-c-----c-----CCcccccccCChhhHHHHHHHHHHHHHHHHHhccchHhhccccccc--cccHHHHHH--HH Q lcl|Aclame:pro 249 TGKTMV-V-----E-----EGMEPIPLQLTAVEMQFIEARQLNREEVCGVYDIAPPIVHILDRAT--FSNISAQMR--AF 313 (518) Q Consensus 249 ~g~~~v-l-----~-----~g~~~~~~~~~~~d~q~~e~~~~~~~~Ia~~fgVpp~~lg~~~~~~--~s~~e~~~~--~~ 313 (518) ..+.+- + + .|.+++.+... +.+.-++-.++..+.+.++++||.+-++..+.+. .+...+-.+ .- T Consensus 324 drk~msMlEDyWLpRReGgrgTEItTLpGg-qnlgem~DV~YF~kkLy~aLnVP~sRl~~e~~~~f~~gr~~EItRDEiK 402 (524) T protein:vir:10 324 QQHNMSMTEDYWLQRRDGKAVTEVDTMPGA-TGMSDMDDVLYFRTALYRALRIPESRIPSESNSGVMFDAGTAITRDELK 402 (524) T ss_pred chhhhhhHhhhcccccCCCCccceeecccc-CCcChHHHHHHHHHHHHHHhCCCchhccCCCCccccccccchhhHHHHH Confidence 111111 1 1 23444444322 2233334455667889999999999995332211 211111111 11 Q ss_pred HHHHHHHHHHHHHHHHHh----hh-----cch--hh---ccceeeechhh----hhccC-HHHHHHHHHHHHh--CCCcC Q lcl|Aclame:pro 314 YRDTMAIPIARIQSAMDK----YV-----GQY--WV---RKNRMKFDIDD----VIQPD-WEAKSESTQKMVN--SGVAT 372 (518) Q Consensus 314 ~~~~l~P~~~~ie~~ln~----~l-----~~~--~~---~~~~~~fd~~~----l~~~d-~~~~~~~~~~~~~--~g~~T 372 (518) ...-|.-+..++...+.. .| ++. +. ....+.|..+. +.... ...|...+..+-. .-.++ T Consensus 403 F~KFI~rLR~rFs~lf~~~L~~qLilKgiit~eew~~i~~~I~~~f~~Dn~f~ElKe~Eil~~R~~~l~~~dpyvGky~s 482 (524) T protein:vir:10 403 FAKWIRQLQNKFEEIFLDPLKTNLILKKIITEDEWEREINNIKVTFNRDSYFSEMKDAEIMERRINMLTMAEPFIGKYIS 482 (524) T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhccCCCHHHHHHHhhcceEEeeecchHHHHHHHHHHHHHHHHHHHhhhhhcccch Confidence 112233333344333333 22 121 11 12233333222 11111 1223333332211 11334 Q ss_pred HHHHHHH-HhCCCCCCccCceeeecccccccccccccCCCCCCCCCCCCcccCCCCCccCCc Q lcl|Aclame:pro 373 PNEGREI-MGLPRSDDPKADELYANSALQPLGATPDGAVEGEEAPAPKRPASTPVASLDQSP 433 (518) Q Consensus 373 ~NE~R~~-~g~~pi~~~~gD~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 433 (518) .+=+|+. |.+.--+-..-++ .+ . .....+--++| ..+.++- T Consensus 483 ~~yi~k~ILr~tDeei~~~~k-----~I---~-------~E~k~~~~~~~-----~~~~~~f 524 (524) T protein:vir:10 483 HQTAMKDFLQMTDEEINQEAK-----QI---E-------EESKEARFQNP-----DEEEEDF 524 (524) T ss_pred hHHHHHHHhccCHHHHHHHHH-----HH---H-------HHhhcCCCCCC-----ChhhhcC Confidence 4444432 3332110000000 00 0 00000000000 0000111 No 239 >protein:vir:104500 Length: 537 # NCBI annotation: gp20 # Family: family:all:1036 # MgeID: mge:1548 # MgeName: P-SSM4 # Cross-refs: genbank:acc:YP_214665;genbank:gi:61806306;genbank:GeneID:3294555 Probab=84.78 E-value=0.058 Score=27.37 Aligned_cols=427 Identities=11% Similarity=0.100 Sum_probs=163.3 Q ss_pred CCCCCCCCCc-----ccccccc------chhhhhhhccCcc--C-Ccc-cCccchhhHHHHhhhHHHHHHHHHHHHhhcc Q lcl|Aclame:pro 1 MLLANGQTLS-----APAMAEL------SPQMQDSYYYAPA--V-GMQ-LERQFSLYGGIYKNQPWVRTVIAKRAQALAR 65 (518) Q Consensus 1 ~~f~~~~~~~-----~~~~~~~------~~~~~~~~~~~~~--~-~~~-~~~~~~~~~~~~~~~~~v~~~v~~ia~~ia~ 65 (518) -|||-+-... +++.... .+.....+++.-. . ... .......|++ .+.+|-|..||+-|.+.+.- T Consensus 4 ~lfg~~i~~~~~~~~~~s~~~~~~~dg~~~~~~~~~~g~~~~~e~~~~~~~eLI~~YR~-ma~~pEvd~Av~eIVneaiv 82 (537) T protein:vir:10 4 QLFGFSLQRAKKVPKGPSFVQKDSLDGSQPIVGGGYFGYSVDFDGTIRNDHELITRYRE-MVLNPECDSAVDDVVNETIC 82 (537) T ss_pred ccccceeecccccccCCcccCCCcccccceeecccccccccccccccchHHHHHHHHHH-HhhccchhhHHHHhhcceeE Confidence 5677543221 1111111 1111111111100 0 000 0011222333 34789999999999988753 Q ss_pred C-----ceEEEEecCCceee---ecchHHHHHhhccCccCCHHHHHHHHHHHHHHcCCeeEEeeeCCC---Cceeeeeee Q lcl|Aclame:pro 66 L-----PVKCMFTSGDTETE---EHDTGYAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQKNKS---GTPEKLMPM 134 (518) Q Consensus 66 l-----p~~v~~~~~~~~~~---~~~~~~~~l~~~PN~~~t~~~f~~~~~~~~ll~G~~~~~i~~~~~---G~~~~l~~l 134 (518) . |..|--.+-+.... .....+..++.--+-...++++ ++.|++.|..|..++-+.+ ..+.+|+.| T Consensus 83 ~d~~~~pV~i~Ld~~~~s~~iK~kI~eEF~~Il~ll~F~~~~~e~----fR~WYVDgRi~fhKiid~k~pk~GI~ELr~l 158 (537) T protein:vir:10 83 GNFDDVPISIDLHNLKQSEKIKKLIRSEFDEILRLLDFDNRAYEI----FRRWYVDGRLFFHKVIDPKKPRQGLVELRYV 158 (537) T ss_pred ecCCCceEEEEecccccchHHHHHHHHHHHHHHHHhccchhhhHH----HhhheeeeEEEEEEEEeCCCccccceeeeee Confidence 2 33332221111111 1111222233333334445554 4556789999998876533 358999999 Q ss_pred CCcceEEEecc-----Ccce-------------EEEEeeccC--CCCceeEEEeeeeeEEeec---CCCCcccccchHHH Q lcl|Aclame:pro 135 HPSRVAIKRNS-----RTGR-------------YEYYFQAGA--GVGTQLVSFADDEVVPIRF---FNPDGLERGLSLME 191 (518) Q Consensus 135 ~p~~v~~~~~~-----~~~~-------------~~~~~~~~~--~~~~~~~~~~~~~vih~~~---~~~~~~~~G~s~~~ 191 (518) +|..++.++.- .+.. .+|-|...+ ...+..++++.+-| ++-+ .+.++ .+.+|-|. T Consensus 159 DPr~i~~vR~i~~~~~~~~~~~~~~~~v~~~~~eyf~ynp~g~~~~~~~~vkI~~dAI-~y~hSGl~d~n~-~~i~syLh 236 (537) T protein:vir:10 159 DPRKIRKVTEYEAKRPEALRTQDLNQQLTQQSASYFLYNPKGLKNSTNQGMKIAPDSI-AYCHSGIQDLNK-NMVLSHLH 236 (537) T ss_pred CCccceeeEeecccCCccceEEecceeeeecccceeeeccccccccCCCceeccHhhe-eeecccceeCCC-Ceeeeeeh Confidence 99998755431 1111 011121111 11234466666444 4333 12222 35688889 Q ss_pred HHHHHHHHHHHHHHHHHHHHHccCCcceeeeeCC-cCCHHHHHHHHHHHHHHhcC----ccccc------ccee-c---- Q lcl|Aclame:pro 192 SLKSTIFSEDSSRNATAAMWKNAGRPNLVLRHEK-RLSPEAQQRLREQFDRAHAG----SSNTG------KTMV-V---- 255 (518) Q Consensus 192 ~~~~~i~~~~~~~~~~~~~~~ng~~p~gil~~~~-~~~~e~~~~~~~~~~~~~~g----~~n~g------~~~v-l---- 255 (518) .|...+....-++....-+==.-+.-+-|+.++- .+.+..+++..+.+-..|.. ....| +.+- + T Consensus 237 kAiKp~NQLkm~EDAlVIYRitRAPeRRvFYIDVGnLPk~KAeqYlr~iM~k~KNklVYDa~TGev~ddrk~msMlEDyW 316 (537) T protein:vir:10 237 KAIKAVNQLRMIEDSLVIYRLSRAPERRIFYIDVGNLPKNKAEQYLREVMGRYRNKLVYDANTGEIKDDKKFMSMLEDFW 316 (537) T ss_pred hhhHHHHhhHHHHhhHHHHhhhccccceEEEEecCCCCchhHHHHHHHHHHhccceEEEeccCceecccchhhhhhhhhc Confidence 8888888877777765444333333344555542 23333333333333333321 00111 1111 1 Q ss_pred -c-----CCcccccccCChhhHHHHHHHHHHHHHHHHHhccchHhhccccccccccHHHHHH---HHHHHHHHHHHHHHH Q lcl|Aclame:pro 256 -E-----EGMEPIPLQLTAVEMQFIEARQLNREEVCGVYDIAPPIVHILDRATFSNISAQMR---AFYRDTMAIPIARIQ 326 (518) Q Consensus 256 -~-----~g~~~~~~~~~~~d~q~~e~~~~~~~~Ia~~fgVpp~~lg~~~~~~~s~~e~~~~---~~~~~~l~P~~~~ie 326 (518) + .|.+++.+... +.+.-++-.++..+.+.++++||.+-|...+.-+.....+-.+ .|. .-|.-+..++. T Consensus 317 LPRReGgrgTEItTLpGg-qnlgem~DV~YF~kKLy~aLnVP~SRl~~e~~f~~Gr~~EItRDEiKF~-KFI~RLR~rFs 394 (537) T protein:vir:10 317 LPRREGGRGTEISTLPGG-QNLGELEDVKYFQKKLYKALNVPSSRLETETTFNIGRAAEITRDEVKFQ-KFIARLRKRFS 394 (537) T ss_pred ccccCCCcccceeecccc-CCcChHHHHHHHHHHHHHHhCCCccccCCCCcccccccchhhHHHHHHH-HHHHHHHHHHH Confidence 1 23444444322 2233334456667889999999999987543323222222111 122 22333334444 Q ss_pred HHHHhhh---------cch--hh---ccceeeechhh----hhccC-HHHHHHHHHHHH--hCCCcCHHHHHHH-HhCCC Q lcl|Aclame:pro 327 SAMDKYV---------GQY--WV---RKNRMKFDIDD----VIQPD-WEAKSESTQKMV--NSGVATPNEGREI-MGLPR 384 (518) Q Consensus 327 ~~ln~~l---------~~~--~~---~~~~~~fd~~~----l~~~d-~~~~~~~~~~~~--~~g~~T~NE~R~~-~g~~p 384 (518) ..+...| ++. +. ....+.|..+. +.... ...|+..+..+- -.-.++.+=+|+. |.+.- T Consensus 395 ~lF~~~Lk~qLilKgiit~eeW~~i~~~I~~~f~~Dn~f~ElKe~Eil~~Rl~~l~~~dpyvGky~s~dyi~k~ILr~tD 474 (537) T protein:vir:10 395 ELFVDLLKTQLILKGICSIEEWEEMKEHIQFDFIADNYFTELKEIEIRNERMNEVAQMDPYVGKYFSANYIRTKVLKQTE 474 (537) T ss_pred HHHHHHHHHhhhhccCCCHHHHHHHhhcceEEeeecchHHHHHHHHHHHHHHHHHHHhhhhhhcccchHHHHHHHhccCH Confidence 3333322 121 11 12233333222 11111 122333333221 0112333333321 22210 Q ss_pred ---------CCCccCceeeec-ccccccccccccCCCCCCCCCCCCcccCCCCCccCCcc-cccccc Q lcl|Aclame:pro 385 ---------SDDPKADELYAN-SALQPLGATPDGAVEGEEAPAPKRPASTPVASLDQSPP-ASVPGL 440 (518) Q Consensus 385 ---------i~~~~gD~~~~~-~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 440 (518) ++.+-.+-++.. .....++ .+...+.+.++.+. .....+...+.|. .+.++. T Consensus 475 eeI~~~~k~I~~E~k~~~~~~p~~~~~~~---~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 537 (537) T protein:vir:10 475 SEIKEIDKEIKQEIADGVIMDPQAMQAME---MGIGDEEPVPEGGE-EPQTDPNSAVSPADQKRGEL 537 (537) T ss_pred HHHHHHHHHHHHHhhCCCCCCcccccccc---cCCCCcccCCCCCC-CcccCCccCCCCCCccCCCC Confidence 000001111110 0000000 00000000111000 0000000111110 011111 No 240 >protein:vir:78393 Length: 489 # NCBI annotation: putative structural protein # Family: family:all:584 # MgeID: mge:1851 # MgeName: SETP3 # Cross-refs: genbank:acc:YP_001110831;genbank:gi:134288592;genbank:GeneID:5179656 Probab=84.20 E-value=0.062 Score=27.19 Aligned_cols=397 Identities=12% Similarity=0.100 Sum_probs=161.9 Q ss_pred CCCCCCCCCccccc-------cccchhhhhhhccCccC-----Ccc-cCccc-hhhHHHHhh----hHHHHHHHHHHHHh Q lcl|Aclame:pro 1 MLLANGQTLSAPAM-------AELSPQMQDSYYYAPAV-----GMQ-LERQF-SLYGGIYKN----QPWVRTVIAKRAQA 62 (518) Q Consensus 1 ~~f~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~-----~~~-~~~~~-~~~~~~~~~----~~~v~~~v~~ia~~ 62 (518) |+-.+++-...... ...-..+.+.++|.... +.+ ..+.. ......++. .+++...++.++.. T Consensus 1 ~~~~~~~~~~V~~~hp~y~a~~~~W~~ird~~~G~~~~~~r~~yl~~~~~~~~e~~Y~~rl~rA~~~n~~~~tl~~l~G~ 80 (489) T protein:vir:78 1 MLTENGQGSGVKTKHREWLHYAPKWQKVRHALAGELVSYLRNVGLNEPDKAYGEARQAEYEAGGIVYNFTRRTLSGMVGS 80 (489) T ss_pred CccCCCccCCCCccCHHHHHHHHHHHHHHHHhcCcccccccCCCCCCCCCCCChHHHHHHHhccccCChHHHHHHHHhch Confidence 77666554333211 11112223334442211 111 01111 111122222 34455555555555 Q ss_pred hccCceEEEEecCCceeeecchHHHHHhhccC-ccCCHHHHHHHHHHHHHHcCCeeEEeeeCCCCc------------ee Q lcl|Aclame:pro 63 LARLPVKCMFTSGDTETEEHDTGYAKLLADPC-EYLDPFAFWEWVASTLDIYGETYLAIQKNKSGT------------PE 129 (518) Q Consensus 63 ia~lp~~v~~~~~~~~~~~~~~~~~~l~~~PN-~~~t~~~f~~~~~~~~ll~G~~~~~i~~~~~G~------------~~ 129 (518) +-+-|..+ ... ..+..|+..-. ...+..+|.+.++...+.+|.+++++.....|. |. T Consensus 81 vfrk~p~~---------~~p-~~l~~l~~d~D~~G~~L~~f~~~~~~~~l~~G~~~ilVD~P~~~~~T~ade~~~~~rPy 150 (489) T protein:vir:78 81 VMRKEPEI---------NIP-KELEYLLKNADGSGVGLIQHAQDTLMEIDSVGRGGLLVDAPETGAATAAEQNAGLLNPT 150 (489) T ss_pred hhcCCcce---------ecc-HHHHHHHhccCCCCCCHHHHHHHHHHHHHhcCeEEEEEeeCCCCCcCHHHHHHhcCCcE Confidence 54444332 111 22334444333 357889999999999999999999988765542 11 Q ss_pred eeeeeCCcce-----------------EEEe-----c---cCcce--EEEEeecc----------------CCCCceeE- Q lcl|Aclame:pro 130 KLMPMHPSRV-----------------AIKR-----N---SRTGR--YEYYFQAG----------------AGVGTQLV- 165 (518) Q Consensus 130 ~l~~l~p~~v-----------------~~~~-----~---~~~~~--~~~~~~~~----------------~~~~~~~~- 165 (518) +..+.|..| .+.. + ..+.. ..|++... +....... T Consensus 151 -~~~~~~~~IinW~~~~v~G~~~Lt~v~lrE~~~~~d~~~~f~~~~~~q~RvL~~~~~g~~~~~~~r~~~~g~~~~~~~~ 229 (489) T protein:vir:78 151 -IAFYTTENIVNWRLTRVGSVNRVTMVVLRETWEYNEPGNEFETKYGEQYRVLDIDSDGNYRQRLFRFDAEGGAQEDVVE 229 (489) T ss_pred -EEEechhhhcCceeeeeCCccceeEEEEEEeEEeecCCCCccceeEEEEEEEecCCCcceEEEEEEeecCCcccceeeE Confidence 222222221 1111 0 01110 11111100 00000000 Q ss_pred --------EEeeeeeEEeecCCCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHccCCcceeeeeCCcCCHHHHHHHHH Q lcl|Aclame:pro 166 --------SFADDEVVPIRFFNPDGLERGLSLMESLKSTIFSEDSSRNATAAMWKNAGRPNLVLRHEKRLSPEAQQRLRE 237 (518) Q Consensus 166 --------~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~p~gil~~~~~~~~e~~~~~~~ 237 (518) .+..-.++.+-. ...+...|.||+..++..-..+.....-....+...+.|..+++-....+++....... T Consensus 230 ~~~~~g~~~l~~IPfv~~~~-~~~~~~~~~pPLl~LA~lni~Hy~~ssd~~~~l~~~~~P~l~i~G~d~~~~~~~~~~~~ 308 (489) T protein:vir:78 230 IYPDLGESLRGVIPFTFIGA-TNNDATIDDAPLLPLAELNIGHYRNSADNEESSFVVGQPTLFIYPGENLTPQAFKEANP 308 (489) T ss_pred EeccCCCCccCeeeEEEEec-CCCCCCCCcCchHHHHHHHHHHhhhhhHHHHHHHHcccceeeeecCccCCcccccccCc Confidence 011111222221 22344567888887765433333333334556667788887776544444443221111 Q ss_pred HHHHHhcCccccccceeccCCcccccccCChhhHHHHHHHHHHHHHHHHHhccchHhhccccccccccHHHHHHHHHHHH Q lcl|Aclame:pro 238 QFDRAHAGSSNTGKTMVVEEGMEPIPLQLTAVEMQFIEARQLNREEVCGVYDIAPPIVHILDRATFSNISAQMRAFYRDT 317 (518) Q Consensus 238 ~~~~~~~g~~n~g~~~vl~~g~~~~~~~~~~~d~q~~e~~~~~~~~Ia~~fgVpp~~lg~~~~~~~s~~e~~~~~~~~~~ 317 (518) .....|+ +....++.+.++.-+..++..+. .+.++.... .+..+-..++-- ...--+............. T Consensus 309 --~~i~~g~---~~~~~lp~~~~~~~ie~~~~~~~-r~~l~~le~---qm~~lGa~l~~~-~~~~Ta~~~~~~~~~~~S~ 378 (489) T protein:vir:78 309 --NGIKFGS---RRGHNLGYGGSAQLIQAGENNLA-RQNMLDKEQ---QAIQIGAQLITP-TQQITAQSARIQRGADTSV 378 (489) T ss_pred --cceeeCC---cccccCCCCCCcceeccCcchHH-HHHHHHHHH---HHHHHhhhhccC-CcchhHHHHHHHHHHhhHH Confidence 1112232 23456666655544444443332 111211111 122222233321 1111112223344555677 Q ss_pred HHHHHHHHHHHHHhhhc--chh-hc--c--ceeeechhhh-hccCHHHHHHHHHHHHhCCCcCHHHHHHHHhCCCCCCcc Q lcl|Aclame:pro 318 MAIPIARIQSAMDKYVG--QYW-VR--K--NRMKFDIDDV-IQPDWEAKSESTQKMVNSGVATPNEGREIMGLPRSDDPK 389 (518) Q Consensus 318 l~P~~~~ie~~ln~~l~--~~~-~~--~--~~~~fd~~~l-~~~d~~~~~~~~~~~~~~g~~T~NE~R~~~g~~pi~~~~ 389 (518) |.-++..+++++++.|- ..+ +. . ..+.++.+-. ...|.. ..+.+-.+++.|.|+....++.+-.--+.++. T Consensus 379 L~~~a~~~e~al~~~l~~~a~w~G~~~~~~~~i~~n~dF~~~~~d~~-~~~al~~~~~~G~is~~t~~~~L~~~gv~d~~ 457 (489) T protein:vir:78 379 MATIARNVSQAYTDALRWVAVMLGKPEDTEVEFRLNMDFFLEPMTAQ-DRAAWMADINAGLLPATAYYAALRKAGVTDWT 457 (489) T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCCCCceEEEeecccCcccCCHH-HHHHHHHHHhcCCCCHHHHHHHHHhCCCCCcc Confidence 88888889999887642 111 11 1 2232232221 222333 45556668889999999988877443222110 Q ss_pred CceeeecccccccccccccCCCCCCCCC-CCCcccCCCCCccCCc Q lcl|Aclame:pro 390 ADELYANSALQPLGATPDGAVEGEEAPA-PKRPASTPVASLDQSP 433 (518) Q Consensus 390 gD~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 433 (518) -++.. +...+ ++.+. ...+++-|...++++. T Consensus 458 ~e~~~--------~ei~~-----~~~~~~~~~~g~~~~~~q~~~~ 489 (489) T protein:vir:78 458 DADIK--------DAVAD-----QPLPVATEVQGEIPQSAQQQEK 489 (489) T ss_pred HHHHH--------HHHhh-----cCCCcccCCcccCCCCcccccC Confidence 00000 00000 00000 0001111111111110 No 241 >protein:vir:103330 Length: 517 # NCBI annotation: head portal-like protein # Family: family:all:481 # MgeID: mge:1609 # MgeName: Era103 # Cross-refs: genbank:acc:YP_001039666;genbank:gi:125999995;genbank:GeneID:4818406 Probab=83.26 E-value=0.07 Score=26.92 Aligned_cols=374 Identities=10% Similarity=0.032 Sum_probs=134.2 Q ss_pred CCCCCCCCCccccccccchhhhhhhccCccCCcccCccchhhHHHHhhhHHHHHHHHHHHHhhc--cCceEEEEecCCce Q lcl|Aclame:pro 1 MLLANGQTLSAPAMAELSPQMQDSYYYAPAVGMQLERQFSLYGGIYKNQPWVRTVIAKRAQALA--RLPVKCMFTSGDTE 78 (518) Q Consensus 1 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~v~~ia~~ia--~lp~~v~~~~~~~~ 78 (518) .+|-.... +....+.+..+. .-++......+...+- +-||.=....+... T Consensus 40 ~~~~~~~~-----------------------~~~~~~~~dstg-----~~a~~~LAa~l~~~ltpp~~~WF~l~~~~~~l 91 (517) T protein:vir:10 40 YLMADVND-----------------------DLSSQNAWQDDG-----ASATNFLSNKLSQVLFPAQRSFFRIDLTPEGI 91 (517) T ss_pred ccccCCCC-----------------------CccccccccchH-----HHHHHHHHHHHHHhhcCCCCccccccCCHHHH Confidence 22211110 000001111111 1244444544544443 34553222111100 Q ss_pred e----------eecc------hHHHHHhhccCccCCHHHHHHHHHHHHHHcCCeeEEeeeCCCCceeeeeeeCCcceEEE Q lcl|Aclame:pro 79 T----------EEHD------TGYAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQKNKSGTPEKLMPMHPSRVAIK 142 (518) Q Consensus 79 ~----------~~~~------~~~~~l~~~PN~~~t~~~f~~~~~~~~ll~G~~~~~i~~~~~G~~~~l~~l~p~~v~~~ 142 (518) . +... ..++..+.+ -+++.=+..+..+++.+||+.+++ +..+.....||+ .++.+. T Consensus 92 ~~~~~~~~~~~~v~~~L~~ve~~~~~~l~~----snf~~~~~~~~~~L~~~G~a~ly~--~~~~~~~~~~pl--~~y~v~ 163 (517) T protein:vir:10 92 KQLDNEAMTQSTAQKLLSDVEKAAMLYGES----LQFRPAVVEAFKHLIVTGNVMMYH--PDKTSPIQAVPL--HHYCVR 163 (517) T ss_pred HhhccCcchHHHHHHHHHHHHHHHHHHHHh----cCcHHHHHHHHHHHHhHCeEEEEE--eCCCCcEEEEEc--CeEEEe Confidence 0 0000 011112222 244455566677888999998764 223334556666 344455 Q ss_pred eccCcceE-------------------------------------EEEeeccCCCC---------cee------EEEeee Q lcl|Aclame:pro 143 RNSRTGRY-------------------------------------EYYFQAGAGVG---------TQL------VSFADD 170 (518) Q Consensus 143 ~~~~~~~~-------------------------------------~~~~~~~~~~~---------~~~------~~~~~~ 170 (518) .|..|... .|........+ +.. +.+... T Consensus 164 ~d~~G~v~~ivrr~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~v~~~v~~~~~~~~~~~~~~d~~~~~~~s~y~~~e~ 243 (517) T protein:vir:10 164 RDNNGTVLDIVFLQEKALETFEPSIRMAIQASRKGKQYKDKDNVKLYTHAKRTKDGKYLIRQSADDVPVGKESTVTEDKS 243 (517) T ss_pred eCCCcCeEEEEeeeeccHHHHHHHhhhhcchhhhhhccCCcCceEEEEEEEEeCCCceEEEEEeCceeeccccccccccC Confidence 55444321 11000000000 000 001122 Q ss_pred eeEEeecCCCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHccCCcceeeeeCCcCCHHHHHHHHHHHHHHhcCccccc Q lcl|Aclame:pro 171 EVVPIRFFNPDGLERGLSLMESLKSTIFSEDSSRNATAAMWKNAGRPNLVLRHEKRLSPEAQQRLREQFDRAHAGSSNTG 250 (518) Q Consensus 171 ~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~p~gil~~~~~~~~e~~~~~~~~~~~~~~g~~n~g 250 (518) ..+-.|....+|..||.||.+-+...+.....+.+.......-...|...+.-+....+... ..|..+. T Consensus 244 P~~~~Rw~~~~ge~YGrgp~~~~L~D~k~L~~l~~~~~~~~~~a~~~~~lv~~~~~~~~~~l----------~~~~~g~- 312 (517) T protein:vir:10 244 PFLILTWKRSYGEDYGRGMAEDHAGAFFVIQFLSEALARGMALMADVKYLVKPGSYTDINQF----------VEGGSGA- 312 (517) T ss_pred CeeeeeeeecCCCCcccchHHHhHHHHHHHHHHHHHHHHHHHHhccCCcccCcccccchhhc----------cCCCccc- Confidence 33444555556778999999999999999999988888888887777666543333222211 1111110 Q ss_pred cceeccCCcccccccCChhhHH-HHHHHHHHHHHHHHHhccchHhhccccccccccHHHHHHHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 251 KTMVVEEGMEPIPLQLTAVEMQ-FIEARQLNREEVCGVYDIAPPIVHILDRATFSNISAQMRAFYRDTMAIPIARIQSAM 329 (518) Q Consensus 251 ~~~vl~~g~~~~~~~~~~~d~q-~~e~~~~~~~~Ia~~fgVpp~~lg~~~~~~~s~~e~~~~~~~~~~l~P~~~~ie~~l 329 (518) -+.--.+++...++.. ..|.+ ..+..+.....|-.+|=+.....-..+..|-.-+ .....-....|.|.+.++.++| T Consensus 313 ~~~g~~~~v~~~~~~~-~~d~~~~~~~i~~~~~rI~~af~~~~l~~~~~~rvTAtEV-~~r~~E~~~~LGpv~~rl~~El 390 (517) T protein:vir:10 313 VLHGVEGDIHIVQLGK-YADYTPIQAVLNDYRQRIGRVFMMEAMTRRDAERVTAYEI-QRDAMLVEQSLGGVYSLFATTF 390 (517) T ss_pred cccCCcccceeeeccc-ccchhHHHHHHHHHHHHHHHHHhhhhhhccCCccccHHHH-HHHHHHHHHHhhhHHHHHHHHH Confidence 0111112222222222 22333 2445566677888888655422212222221111 1233344456777777766663 Q ss_pred Hhhhcch-------h--hccceeeec--hhhhhcc-CHHHHHHHHHHHHhC-C--------CcCHHH----HHHHHhCCC Q lcl|Aclame:pro 330 DKYVGQY-------W--VRKNRMKFD--IDDVIQP-DWEAKSESTQKMVNS-G--------VATPNE----GREIMGLPR 384 (518) Q Consensus 330 n~~l~~~-------~--~~~~~~~fd--~~~l~~~-d~~~~~~~~~~~~~~-g--------~~T~NE----~R~~~g~~p 384 (518) =.-|+.. . .....+++- +..+.+. +.......+.. +.. . .+..++ +-+.+|.|+ T Consensus 391 l~Pli~r~~~~l~~~l~~~~v~~~~~s~la~l~r~~~~~~i~~~~~~-i~~~a~~~~~~~~~id~d~~~~~~a~~~Gvp~ 469 (517) T protein:vir:10 391 QGPLARWFMNGISSILTSKNVSPTILTGIEALGRMAELDKLGTFNGY-VSMTAQWPEPLQQAIKWPDFTDWVQGQISANF 469 (517) T ss_pred HHHHHHHHHHHhhhhcCCCCccceeeccHHHHHHHHHHHHHHHHHHH-HHHhhcCChHHHhcCCHHHHHHHHHHHhCCCh Confidence 2222110 0 011111110 0111110 11111111111 110 0 111122 122233331 Q ss_pred CCCccCceeeecccccccccc----cccCCCC----CCCCCCCCcccCCCCCccCCccccccc Q lcl|Aclame:pro 385 SDDPKADELYANSALQPLGAT----PDGAVEG----EEAPAPKRPASTPVASLDQSPPASVPG 439 (518) Q Consensus 385 i~~~~gD~~~~~~n~~~~~~~----~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~ 439 (518) .++.-... ....... ......++........ ++. +.+.++ T Consensus 470 -------------~~irs~~ev~~~~~~~~~~~~~~~~~~~ag~~~~~~~~~-~~~-~~~~~~ 517 (517) T protein:vir:10 470 -------------PFFKTQDELNAEAQAQQEQEATKYAAEQAGKAIPDMVKN-GQI-NPQGGQ 517 (517) T ss_pred -------------hhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CCC-CCCCCC Confidence 11110000 0000000 0000000000000000 000 000000 No 242 >protein:vir:95149 Length: 501 # NCBI annotation: hypothetical protein ORF007 # Family: family:all:584 # MgeID: mge:1552 # MgeName: PA73 # Cross-refs: genbank:acc:YP_001293414;genbank:gi:148912835;genbank:GeneID:5228224 Probab=83.06 E-value=0.072 Score=26.86 Aligned_cols=404 Identities=12% Similarity=0.039 Sum_probs=152.0 Q ss_pred CCCCCCCCCccccccccchhhhhhhccCcc---CCcccCc----------cchhhHHHHhhhHHHHHHHHHHHHhhccCc Q lcl|Aclame:pro 1 MLLANGQTLSAPAMAELSPQMQDSYYYAPA---VGMQLER----------QFSLYGGIYKNQPWVRTVIAKRAQALARLP 67 (518) Q Consensus 1 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~----------~~~~~~~~~~~~~~v~~~v~~ia~~ia~lp 67 (518) |=.=..+.+...++...-..+.+.++|... .|...-+ ....| ..+..-...+..+..+.+.+.++. T Consensus 1 m~~V~~~hp~y~~~~~~W~~ird~~~G~~~~r~~g~~YLP~~~~e~~~~e~~~~Y-~~rl~rA~~~n~~~~t~~~l~G~v 79 (501) T protein:vir:95 1 MPNVSFIRPELGKLLPLYYLIRDAIAGEPTVKGARTTYLPMPNAEDQSKENKARY-EAYLKRAVFYNVARRTLFGLVGQV 79 (501) T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHhcChHHHHhcccccCcCCCCCCCcccchHHH-HHHhhccccCchHHHHHHHHhhhh Confidence 221011111111122222223333333321 1111100 01112 223333333333333333344444 Q ss_pred eEEEEecCCceeeecchHHHHHhhccC-ccCCHHHHHHHHHHHHHHcCCeeEEeeeCCCCc---------------eeee Q lcl|Aclame:pro 68 VKCMFTSGDTETEEHDTGYAKLLADPC-EYLDPFAFWEWVASTLDIYGETYLAIQKNKSGT---------------PEKL 131 (518) Q Consensus 68 ~~v~~~~~~~~~~~~~~~~~~l~~~PN-~~~t~~~f~~~~~~~~ll~G~~~~~i~~~~~G~---------------~~~l 131 (518) |.--. ... -...+..|+..-. ...+..+|.+.++...+.+|.+++++-....+. |. + T Consensus 80 f~k~p-----~~~-~p~~l~~l~~d~D~~G~~L~~f~~~~~~~~l~~G~~~ilVD~P~~~~~~~~t~a~~~~~~~rPy-~ 152 (501) T protein:vir:95 80 FMRDP-----VVK-VPALLNPLVANATGSGINLTQLAKRAVSLNLAYSRAGLLVDYPTTEAEGGASIADLEAGRIRPT-L 152 (501) T ss_pred hcCCc-----cee-CcHHHHHHHhccCCCCCCHHHHHHHHHHHHHhcCeEEEEEeecCCCCcccccHHHHHhccCCcE-E Confidence 42100 011 1223344444332 346889999999999999999999986643221 11 2 Q ss_pred eeeCCcce-----------------EE-----Eecc-C---------------cceEEEEeeccCCCC----------c- Q lcl|Aclame:pro 132 MPMHPSRV-----------------AI-----KRNS-R---------------TGRYEYYFQAGAGVG----------T- 162 (518) Q Consensus 132 ~~l~p~~v-----------------~~-----~~~~-~---------------~~~~~~~~~~~~~~~----------~- 162 (518) ..+.|..| .+ ..++ + .+...+.+......+ . T Consensus 153 ~~~~~~~IinW~~~~v~g~~~l~~v~l~E~~~~~d~~f~~~~~~q~RvL~~~~~g~~~~~v~r~~~~~~~~~~~~~~~~~ 232 (501) T protein:vir:95 153 YVYSPTEIINWRTTDRGAEEVLSLVVLFETWCAADDGFEMKTSGQFRVLRLDEEGYYVHEIWREPQPTKADGSKIPKGNY 232 (501) T ss_pred EEecHhhhcCcceeccCCceeeeEEEEEEEEeecCCCcccceeEEEEEEeeCCCceEEEEEEEecCCcccCcceecCCcc Confidence 22222111 00 0010 0 011111111000000 0 Q ss_pred ---ee--------EEEeeeeeEEeecCCCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHccCCcceeeeeCCcCCHHH Q lcl|Aclame:pro 163 ---QL--------VSFADDEVVPIRFFNPDGLERGLSLMESLKSTIFSEDSSRNATAAMWKNAGRPNLVLRHEKRLSPEA 231 (518) Q Consensus 163 ---~~--------~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~p~gil~~~~~~~~e~ 231 (518) .. ..+..-.++++ +....+...|.+|+..++..-..+.....-....+...+.|..+++-... +. T Consensus 233 ~~~~~~~~~~~g~~~l~~IPfv~~-~~~~~~~~~~~pPLl~lA~lni~hy~~ssd~~~~l~~~~~P~l~i~G~~~---~~ 308 (501) T protein:vir:95 233 QQYVVYKPTDAQGKRLTEIPFMFI-GSENNDSNPDNPNFYDLASLNMAHYRNSADYEESCYIVGQPTPVLIGLTE---EW 308 (501) T ss_pred cccceeeeeccCCCcCCeeeEEEE-ecCCCCCCCCccchHHHHHHHHHHHhhhhHHHHHHHHcccceeeeeCCcc---cc Confidence 00 01111112332 22233445577888877643222222222234445566777776653221 11 Q ss_pred HHHHHHHHHHHhcCccccccceeccCCcccccccCChhhHHHHHHHHHHHHHHHHHhccchHhhcccccccc-ccHHHHH Q lcl|Aclame:pro 232 QQRLREQFDRAHAGSSNTGKTMVVEEGMEPIPLQLTAVEMQFIEARQLNREEVCGVYDIAPPIVHILDRATF-SNISAQM 310 (518) Q Consensus 232 ~~~~~~~~~~~~~g~~n~g~~~vl~~g~~~~~~~~~~~d~q~~e~~~~~~~~Ia~~fgVpp~~lg~~~~~~~-s~~e~~~ 310 (518) .+.... ....-|+ ...+.++.|.++.-+..++.-+. .+.++...+++..+ | ..++-.. ..+. +...... T Consensus 309 ~~~~~~--~~i~~G~---~~~~~lP~~~~~~~ie~~~~~i~-~~~l~~l~~~m~~~-G--a~ll~~~-~~~~Ta~~~~~~ 378 (501) T protein:vir:95 309 VTNVLK--GSVNFGS---RGGIPLPVGADAKLLQASENTML-KEAMDTKERQMVAL-G--AKLVEQK-EVQRTATEAELE 378 (501) T ss_pred cccCCC--Cceeecc---cccccCCCCCceeEEecChhhHH-HHHHHHHHHHHHHH-H--HhhccCC-ccchhHHHHHHH Confidence 100000 0112233 23466776666555554444333 22233333333222 2 2233211 1111 1112223 Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhc---chhh---ccceeeechhhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHHhCCC Q lcl|Aclame:pro 311 RAFYRDTMAIPIARIQSAMDKYVG---QYWV---RKNRMKFDIDDVIQPDWEAKSESTQKMVNSGVATPNEGREIMGLPR 384 (518) Q Consensus 311 ~~~~~~~l~P~~~~ie~~ln~~l~---~~~~---~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~T~NE~R~~~g~~p 384 (518) ..-....|.-++..++++++..|- ...+ ....++++.+-.........++.+-+++..|.++....++.+-.-- T Consensus 379 ~~~~~S~L~~~a~~le~al~~~l~~~a~w~g~~~~~~~v~i~~df~~~~~~~~~~~al~~~~~~G~is~~t~~~~L~~~~ 458 (501) T protein:vir:95 379 AASEGSTLSSATKNVSAAFEWALKWAARWVGQADSGVKFELNTDFDIARMTPDERRSLVEEWQKGAITFEEMRTGLRKAG 458 (501) T ss_pred HHHHhHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCceEEEEecccccccCCHHHHHHHHHHHhCCCCcHHHHHHHHHhCC Confidence 334455677788888888886542 1111 2234444443333332334456667789999999999988774433 Q ss_pred CCCccCceeeecccccccccccccCCCCCCCCCCCCcccCCCCC-ccCCccccc Q lcl|Aclame:pro 385 SDDPKADELYANSALQPLGATPDGAVEGEEAPAPKRPASTPVAS-LDQSPPASV 437 (518) Q Consensus 385 i~~~~gD~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 437 (518) +.++.-+.. .+.......+.+..+. +...+... .+++..+.+ T Consensus 459 v~~~~~~~e--------~e~i~~~~~~~~~~~~---~~~~~~~~~gg~~~~~~~ 501 (501) T protein:vir:95 459 VATEDDSKA--------KEKIAKDTAEAMALAT---PANVPGDGSGGDNVGNSE 501 (501) T ss_pred CCChhHHHH--------HHHHHhhhcCcccccc---cCCCCCCCcccccccCCC Confidence 321110000 0000000000000000 11111000 111101100 No 243 >protein:vir:7430 Length: 563 # NCBI annotation: gp7 # Family: family:all:6920 # MgeID: mge:147 # MgeName: Barnyard # Cross-refs: genbank:acc:NP_818545;genbank:gi:29566982;genbank:GeneID:1260216 Probab=81.78 E-value=0.083 Score=26.52 Aligned_cols=420 Identities=11% Similarity=0.052 Sum_probs=182.4 Q ss_pred CCCCCCCCCcccc-cccc-chhhhhh-------------hccCccCC-cccCccchhhHHHHhhhHHHHHHHHHHHHhhc Q lcl|Aclame:pro 1 MLLANGQTLSAPA-MAEL-SPQMQDS-------------YYYAPAVG-MQLERQFSLYGGIYKNQPWVRTVIAKRAQALA 64 (518) Q Consensus 1 ~~f~~~~~~~~~~-~~~~-~~~~~~~-------------~~~~~~~~-~~~~~~~~~~~~~~~~~~~v~~~v~~ia~~ia 64 (518) |-..+++--+... ++.. ..|+... |....+.. ..+.+... ..-..+|.....|+..+.-+ T Consensus 1 m~~~~~q~~p~~~~fp~~~a~wV~~~D~~RlaaY~ly~d~y~n~~~el~~il~G~d---r~~~~~ps~r~~V~~~~~~L- 76 (563) T protein:vir:74 1 MPYNHKQYDPAKPFLRGGDDNIVDENDKNRVRAYDLYENIYLNSAETLKLVLRGDD---SVPILMPSGRKIVEAVHRFL- 76 (563) T ss_pred CCccccccCCCcccccccccccCCHHHHHHHHHHHHHHHhhcCchhhhhhhcCCCc---eeeeccchHHHHHHHHHHhc- Confidence 5555554333221 2221 1121110 11000000 00000000 00112333445666655444 Q ss_pred cCceEEEEecCCceeeecchHHHHHhhccCccCCHHHHHHHHHHHHHHcCCeeEEeeeCC---CCceeeeeeeCCcceEE Q lcl|Aclame:pro 65 RLPVKCMFTSGDTETEEHDTGYAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQKNK---SGTPEKLMPMHPSRVAI 141 (518) Q Consensus 65 ~lp~~v~~~~~~~~~~~~~~~~~~l~~~PN~~~t~~~f~~~~~~~~ll~G~~~~~i~~~~---~G~~~~l~~l~p~~v~~ 141 (518) +-++++.-...++..... ..+..+++..-..........+.-.+.++.|.+...+.++. .|.-+.+..++|..+.. T Consensus 77 g~~~~~~Ve~~~~de~~~-~avq~~Lr~~~~~e~l~~~~~~~~r~a~vlGDgvf~l~wDp~K~~g~R~rv~~vDP~~~fp 155 (563) T protein:vir:74 77 GVGFDYLVEPDMGDEGIR-QSLNAYFRTTFKREAIKAKFTSNKRWGLIRGDAHFYIHADPNKKAGERISVDEVDPRQIFL 155 (563) T ss_pred CCCcEEecCccccCcchH-HHHHHHHHHHHHHhhhHHHHHHHHHhhhhhcceeEEEeeccccccCCCceEeecCCceeee Confidence 555555322222111111 23445555555566677777778888889999999998874 33344555666654443 Q ss_pred EeccCcceEEE------------------------EeeccC-CC--------------------C---------ceeE-- Q lcl|Aclame:pro 142 KRNSRTGRYEY------------------------YFQAGA-GV--------------------G---------TQLV-- 165 (518) Q Consensus 142 ~~~~~~~~~~~------------------------~~~~~~-~~--------------------~---------~~~~-- 165 (518) ..+.+...-+| .|.-+. +. . .... T Consensus 156 ~~dpd~v~g~~~v~v~~~~~~pdd~~~~~~r~~~~~~~lndeg~~~~~~~~dae~w~lg~wd~r~~~~~~~~~~~~~~~~ 235 (563) T protein:vir:74 156 IEDGSTVVGFHMVDIVQDFRSPDDPSKKLARRRTFRRVRNDEGMFTGRISSELTHWTLGNWDDRGAISDEQARRKEQVRS 235 (563) T ss_pred ccCCCCcccceeeecccCCCCCcchhccceeeeeeeeeeCCCCCccceeeeccchhccccccccCccchhhhcccchhhh Confidence 32222111111 000000 00 0 0000 Q ss_pred ------------EEeeeeeEEeecCCCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHccCCcceeeeeCCcCCHHHHH Q lcl|Aclame:pro 166 ------------SFADDEVVPIRFFNPDGLERGLSLMESLKSTIFSEDSSRNATAAMWKNAGRPNLVLRHEKRLSPEAQQ 233 (518) Q Consensus 166 ------------~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~p~gil~~~~~~~~e~~~ 233 (518) .+.--.|+|++...+.+..+|.|-+.-+...+...+.+..-......-+|.|-.++..-...+. .. T Consensus 236 ~~~d~e~~~LP~pi~~iPiv~~~tip~~~s~WG~S~La~ll~~~~eLn~~~Td~s~i~~~tG~pi~vl~~~~p~d~-~~- 313 (563) T protein:vir:74 236 AQHDEEEEELPEPISQLPLYRWRNKPPQNSSWGTSQLEGMETLAYALNQSLTDEDATIVFQGLGMYVTNASAPVDP-NT- 313 (563) T ss_pred hhhhchhhhccccccCccEEEcCCCCCcccccchhhHHHHHHHHHHHhhhhhHHHHHHHhcCCCeEEecccccccc-cc- Confidence 0001126677777777788999999999998888887777777777777877776654322111 10 Q ss_pred HHHHHHHHHhcCccccccceeccCC---cccccccCChhhHHHHHHHHHH-HHHHHHHhccchHhhccccccc-cccHHH Q lcl|Aclame:pro 234 RLREQFDRAHAGSSNTGKTMVVEEG---MEPIPLQLTAVEMQFIEARQLN-REEVCGVYDIAPPIVHILDRAT-FSNISA 308 (518) Q Consensus 234 ~~~~~~~~~~~g~~n~g~~~vl~~g---~~~~~~~~~~~d~q~~e~~~~~-~~~Ia~~fgVpp~~lg~~~~~~-~s~~e~ 308 (518) .+.....-| .|.++-+++. -.+..++..++-..+..-++.. .+.|+..=++|..-+|-.+.+. -|.+ T Consensus 314 ---g~~~~w~vg---pG~i~El~~~~~~g~l~~v~g~~~l~~~q~Hm~~l~eral~~~s~tPavA~G~vD~~~~~SGi-- 385 (563) T protein:vir:74 314 ---GELTDWNIG---PMQIVEIAGNRNDNYFERVSGVQDVSPFQDHMKWIDEKGIAEGSGTPEVAIGRVDVTSAESGI-- 385 (563) T ss_pred ---ccccccccC---CceeEeccCCccccceeeecchhhhHHHHHHHHHHHHHHHHhhccCcceeecccccccccchh-- Confidence 011111111 2334444422 2344454443332222222222 3356777789999998433322 1111 Q ss_pred HHHHHHHHHHHHHHHHH--------------HHHHHhhhcchhhc------------------cceeeechhhhhccCHH Q lcl|Aclame:pro 309 QMRAFYRDTMAIPIARI--------------QSAMDKYVGQYWVR------------------KNRMKFDIDDVIQPDWE 356 (518) Q Consensus 309 ~~~~~~~~~l~P~~~~i--------------e~~ln~~l~~~~~~------------------~~~~~fd~~~l~~~d~~ 356 (518) -++-.|.|++... -..+...|++...+ ...+.+-+...+..|.. T Consensus 386 ----ALeL~L~PL~a~~~ek~l~l~~~mr~~r~~~~~~lL~~~erl~~~g~~~~~~g~~~~~~~~~v~ivf~p~~P~d~~ 461 (563) T protein:vir:74 386 ----SLELQLKPLLAANEEKELEMIVVMDQFLHDWMTMWLPAYESDFQEQDGSRPFASADLLNECSVVCIFADPMPVNKT 461 (563) T ss_pred ----hhhhhhhHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHhhhhcccccccccccCCceEEEEEeCCCCCccHH Confidence 1112233333311 11111112221111 11234456688999999 Q ss_pred HHHHHHHHHHhCCCcCHHHHHHHH---hCCCCCCccCceee---ecccc-----------cccc--cccccCCCCCCCCC Q lcl|Aclame:pro 357 AKSESTQKMVNSGVATPNEGREIM---GLPRSDDPKADELY---ANSAL-----------QPLG--ATPDGAVEGEEAPA 417 (518) Q Consensus 357 ~~~~~~~~~~~~g~~T~NE~R~~~---g~~pi~~~~gD~~~---~~~n~-----------~~~~--~~~~~~~~~~~~~~ 417 (518) +..+....++.+|+++..=+-++| |++- |..+... ....+ .|.+ ..+++....+...+ T Consensus 462 ~vv~~~~tl~~aGiiSretAv~~L~~~g~~~---pdae~e~~~ie~~~i~~~~~a~a~ad~~~~~~a~~~~g~~~~~~dd 538 (563) T protein:vir:74 462 QVTQDTLLLQQAHLILRKMAVAKLRSIGWEY---PEVDDQGNALTDDDIADMLLAEAEADASLGLSAMDNGGAGEQQFDD 538 (563) T ss_pred HHHHHHHHHHHcCchhHHHHHHHHHhCCCCC---CcHHHHHhhcCHHHHHHHHHHHhhccCcccceecccCCCCcccccc Confidence 999999999999999999887777 5543 2211100 00000 0000 00111111111111 Q ss_pred CCCcccCCCCCccCCccccccccChhh Q lcl|Aclame:pro 418 PKRPASTPVASLDQSPPASVPGLSPTN 444 (518) Q Consensus 418 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 444 (518) .++|..+-....+ .+.+..+....- T Consensus 539 ~g~p~~~~~~~~~--~~~~~~~~~~~~ 563 (563) T protein:vir:74 539 QGNPIDQFGNPVE--IPPDVTQVPLSP 563 (563) T ss_pred cCCchhHcCCccc--CCccccccCCCC Confidence 1222111111110 001111100000 No 244 >protein:vir:96988 Length: 516 # NCBI annotation: 29 # Family: family:all:481 # MgeID: mge:1644 # MgeName: K1-5 # Cross-refs: genbank:acc:YP_654130;genbank:gi:108862014;genbank:GeneID:5075937 Probab=81.61 E-value=0.084 Score=26.48 Aligned_cols=386 Identities=13% Similarity=0.069 Sum_probs=138.4 Q ss_pred CCCCCCCCCccccccccchhhhhhhccCccCCcccCccchhhHHHHhhhHHHHHHHHHHHHhhc--cCceEEEEecCCce Q lcl|Aclame:pro 1 MLLANGQTLSAPAMAELSPQMQDSYYYAPAVGMQLERQFSLYGGIYKNQPWVRTVIAKRAQALA--RLPVKCMFTSGDTE 78 (518) Q Consensus 1 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~v~~ia~~ia--~lp~~v~~~~~~~~ 78 (518) .+|.+... .....+.+..+. .-++......+...+- +-||.=...++... T Consensus 44 ~~~~~~~~-----------------------~~~~~~~~dstg-----~~a~~~LAa~l~~~ltpp~~~WF~L~~~~~~~ 95 (516) T protein:vir:96 44 YLMNDKGD-----------------------NETSQNGWQGVG-----AQATNHLANKLAQVLFPAQRSFFRVDLTAQGE 95 (516) T ss_pred cccCCCCC-----------------------ccccCCcccchH-----HHHHHHHHHHHHhhhcCCCCcccccccChhHH Confidence 33321110 000011111111 1234444444444442 44554322221100 Q ss_pred ee-----ecc-----------hHHHHHhhccCccCCHHHHHHHHHHHHHHcCCeeEEeeeCCCCceeeeeeeCCcceEEE Q lcl|Aclame:pro 79 TE-----EHD-----------TGYAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQKNKSGTPEKLMPMHPSRVAIK 142 (518) Q Consensus 79 ~~-----~~~-----------~~~~~l~~~PN~~~t~~~f~~~~~~~~ll~G~~~~~i~~~~~G~~~~l~~l~p~~v~~~ 142 (518) .. ... ..++..+.+- +++.=+..+..+++.+||+.+++. .++. ...||+ .++.+. T Consensus 96 ~~~~~~~~~~~~v~~~L~~ve~~~~~~l~~s----nf~~~~~~~~~~L~~~G~a~l~~d--~~~~-~~~~pl--~~y~v~ 166 (516) T protein:vir:96 96 KVLNQRGLKKTELATIFAQVETRAMKELEQR----QFRPAVVEAFKHLIVAGSCMLYKP--SKGA-ISAIPM--HHYVVN 166 (516) T ss_pred hhccccCchhHHHHHHHHHHHHHHHHHHHhc----CcHHHHHHHHHHHHhHCeEeEEec--CCCC-EEEEEc--CeEEEe Confidence 00 000 1122222232 344444556778889999988763 3332 445555 334444 Q ss_pred eccCcceE-------------------------------------EEEeeccCCCC---------cee------EEEeee Q lcl|Aclame:pro 143 RNSRTGRY-------------------------------------EYYFQAGAGVG---------TQL------VSFADD 170 (518) Q Consensus 143 ~~~~~~~~-------------------------------------~~~~~~~~~~~---------~~~------~~~~~~ 170 (518) .|..|... .|........+ +.. +.|... T Consensus 167 ~d~~G~v~~i~rr~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~v~~~v~~~~~~~~~~~~~~d~~~~~~es~~~~~e~ 246 (516) T protein:vir:96 167 RDTNGDLLDIILLQEKALRTFDPATRAVVEVGLKGKKCKEDDSVKLYTHAKYLGDGFWELKQSADDIPVGKVSKIKSEKL 246 (516) T ss_pred eCCCCCeeeehhhhHhhHHHHHHhhhhhhhhhhhhhhcCCCCceEEEEeeeeeCCceeEEEEEeCceeeccccccccccC Confidence 44444221 11000000000 000 001122 Q ss_pred eeEEeecCCCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHccCCcceeeeeCCcCCHHHHHHHHHHHHHHhcCccccc Q lcl|Aclame:pro 171 EVVPIRFFNPDGLERGLSLMESLKSTIFSEDSSRNATAAMWKNAGRPNLVLRHEKRLSPEAQQRLREQFDRAHAGSSNTG 250 (518) Q Consensus 171 ~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~p~gil~~~~~~~~e~~~~~~~~~~~~~~g~~n~g 250 (518) ..+-.|....+|..||.||.+-+...+.....+.+.......-...|.+.+.-.....+.. ...|.. | T Consensus 247 P~~~~Rw~~~~ge~YGrgp~~~~L~D~k~L~~l~~~~l~~~~~a~~~~~lv~p~g~~~~~~----------l~~~~~--g 314 (516) T protein:vir:96 247 PFIPLTWKRSYGEDWGRPLAEDYSGDLFVIQFLSEAVARGAALMADIKYLIRPGAQTDVDH----------FVNSGT--G 314 (516) T ss_pred CeeeeeeeecCCCCcccchHHHhhHHHHHHHHHHHHHHHHHHHhcCCccccCcccccchhh----------hccCCC--c Confidence 3344555555677899999999999999999998888887777777765443322222221 111211 1 Q ss_pred cceeccCC-cccccccC-ChhhHH-HHHHHHHHHHHHHHHhccchHhhccccccccccHHHHHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 251 KTMVVEEG-MEPIPLQL-TAVEMQ-FIEARQLNREEVCGVYDIAPPIVHILDRATFSNISAQMRAFYRDTMAIPIARIQS 327 (518) Q Consensus 251 ~~~vl~~g-~~~~~~~~-~~~d~q-~~e~~~~~~~~Ia~~fgVpp~~lg~~~~~~~s~~e~~~~~~~~~~l~P~~~~ie~ 327 (518) .++++. -.+.++.. +..|.+ ..+..+.....|-.+|=+.....-..+..|-.-+ .....-....|.|.+.++.+ T Consensus 315 --~i~~g~~~~v~~~q~~~~~d~~~~~~~i~~~~~rI~~af~~~~l~~r~~~rvTAtEV-~~r~~E~~~~LGpv~~rl~~ 391 (516) T protein:vir:96 315 --EVVTGVEEDIHIVQLGKYADLTPISAVLEVYTRRIGVVFMMETMTRRDAERVTAVEI-QRDALEIEQNMGGVYSLFAT 391 (516) T ss_pred --eeecCCcccceeeecCcccchhHHHHHHHHHHHHHHHHHhhhhhccCCCccccHHHH-HHHHHHHHHHhhhHHHHHHH Confidence 222322 22233322 123333 2345556677888888654322222222221111 12334444567777777776 Q ss_pred HHHhhhcc--------hhhccceeeechhhhhccCHHHHHHHHHHHHh----CC-Cc-CHHHHHHHHhCCCCCCccCcee Q lcl|Aclame:pro 328 AMDKYVGQ--------YWVRKNRMKFDIDDVIQPDWEAKSESTQKMVN----SG-VA-TPNEGREIMGLPRSDDPKADEL 393 (518) Q Consensus 328 ~ln~~l~~--------~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~----~g-~~-T~NE~R~~~g~~pi~~~~gD~~ 393 (518) +|=.-|+. .... ..++... +...+...+..-...+.+ .| +. -.-++...++.+.+-+.-++.+ T Consensus 392 Ell~Pli~r~l~~~~p~lp~-~~v~~~~--vs~l~~l~r~~~~~~i~~~~~~i~~~~~~~p~v~d~id~d~~~~~~a~~~ 468 (516) T protein:vir:96 392 TMQSPVAMWGLLEAGESFTS-DLVDPVI--ITGIEALGRMAELDKLANFAQYMSLPLQWPEPVLAAVKWPDYMDWVRGQI 468 (516) T ss_pred HHHHHHHHHHHHhcCCCCcc-cccccee--echHHHHHHHHHHHHHHHHHHHHHHHhcCChhHHhcCCHHHHHHHHHHHh Confidence 65433321 1110 0111111 001111111111111110 00 00 0011222221111100001111 Q ss_pred eecccccccccccccCCCCCCCCCCCCcccCCCCCccCCccccccccChhhhcchhHHHHHHHHHHhhccCcchh Q lcl|Aclame:pro 394 YANSALQPLGATPDGAVEGEEAPAPKRPASTPVASLDQSPPASVPGLSPTNSDRSTDSGKTEPRRLMQKPPPKES 468 (518) Q Consensus 394 ~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~ 468 (518) -+|..++... ++..+....................+.-..++..++|+ T Consensus 469 Gvp~~~irs~---------------------------eev~~~~~~~~~~q~~~~~a~~~~~~~~~~~~~~~~~~ 516 (516) T protein:vir:96 469 SAELPFLKSA---------------------------EEMAQEQEAQMQAQQAQMLEEGVAKAVPGVIQQELKEA 516 (516) T ss_pred CCCccccCCH---------------------------HHHHHHHHHHHHHHHHHHHHHHhhhhhhHHhhcccccC Confidence 1111100000 00000000000000001111111111111223333333 No 245 >protein:vir:100598 Length: 516 # NCBI annotation: gp20 head portal vertex protein # Family: family:all:1036 # MgeID: mge:1488 # MgeName: 25 # Cross-refs: genbank:acc:YP_656382;genbank:gi:109290133;genbank:GeneID:4156576 Probab=80.03 E-value=0.099 Score=26.10 Aligned_cols=405 Identities=9% Similarity=0.015 Sum_probs=160.1 Q ss_pred CCCCC-------------CCCCccccccccch---hhhh-----hhccC-------ccCCcccCccchhhHHHHhhhHHH Q lcl|Aclame:pro 1 MLLAN-------------GQTLSAPAMAELSP---QMQD-----SYYYA-------PAVGMQLERQFSLYGGIYKNQPWV 52 (518) Q Consensus 1 ~~f~~-------------~~~~~~~~~~~~~~---~~~~-----~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~v 52 (518) -|||. +.....++.+...+ -+.. .+++. ...-..+......|+++ +.+|-| T Consensus 5 ~lf~f~~~~d~~~~~~~~~~~~~s~~~p~~~DGa~~i~~~~~~~~~~g~~~~~~d~~~~~~~~~~LI~~YR~m-a~~pEv 83 (516) T protein:vir:10 5 DLFKFWDRVDQNEYDERLKQGHESIATPKKDDGATEIEAREGESSYNALMQQFFGIDNNISGTKDLINTYRQL-TNNPEV 83 (516) T ss_pred HhcccccchhhHHHHhhhcCCCCcccCCCCccCceeeecCcccccccceeeeeecccCccccHHHHHHHHHHh-hhccch Confidence 35655 11111111111110 0000 00111 00000111112233333 478999 Q ss_pred HHHHHHHHHhhccC-----ceEEEEecCCceee---ecchHHHHHhhccCccCCHHHHHHHHHHHHHHcCCeeEEeeeC- Q lcl|Aclame:pro 53 RTVIAKRAQALARL-----PVKCMFTSGDTETE---EHDTGYAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQKN- 123 (518) Q Consensus 53 ~~~v~~ia~~ia~l-----p~~v~~~~~~~~~~---~~~~~~~~l~~~PN~~~t~~~f~~~~~~~~ll~G~~~~~i~~~- 123 (518) ..||+-|.+.+.-. |..|--.+-+-... .....+..++.--+-...++++ ++.+++.|..|..++-+ T Consensus 84 d~Av~eIvneaiv~d~~~~pV~l~l~~~e~s~sik~kI~eeF~~Il~ll~F~~~~~~~----fR~WYVDgRi~fhKiid~ 159 (516) T protein:vir:10 84 ERAVANIVNEAVVYEKGHKVVSLDLDDTEFSSSIKDKILEEFDEICRLLDASRKLDTL----FRRWYIDSRIFFHKIMPN 159 (516) T ss_pred hHHHHHhhcceeEecCCCceEEEEecccccchHHHHHHHHHHHHHHHHhccchhhhHH----HHhhhhcceEEEEEEecC Confidence 99999999887532 33332111110111 0111222233333334445554 45567899998886554 Q ss_pred CCCceeeeeeeCCcceEEEecc-----Cc------ceEEEEeeccC---------CCCceeEEEeeeeeEEeecC--CCC Q lcl|Aclame:pro 124 KSGTPEKLMPMHPSRVAIKRNS-----RT------GRYEYYFQAGA---------GVGTQLVSFADDEVVPIRFF--NPD 181 (518) Q Consensus 124 ~~G~~~~l~~l~p~~v~~~~~~-----~~------~~~~~~~~~~~---------~~~~~~~~~~~~~vih~~~~--~~~ 181 (518) .+..+.+|..|+|..++.++.- .+ ...+|.|...+ ...+.+++++.+-|.+..-. ..+ T Consensus 160 ~k~GI~elr~lDPr~i~~vR~i~~~~~~~~~v~~~~~e~~~Y~~~~~~~~~~g~~~~~~~~ikI~~daI~y~hSGl~d~~ 239 (516) T protein:vir:10 160 PKEGIVELRRLDPRHVEYYREIVTSDVGGTSVVKGYREFFVYTTGNEGYAYNGRLFEPNTRIKIPRSAIVYAHSGLQDCS 239 (516) T ss_pred cccceeeeeeeCCcceeeEEeeecccCcchhhhhceeeeeeeecCccceeccccccCCCCceecchhheeeeecCcccCC Confidence 3556899999999998865432 11 11122232111 11123455555554433311 112 Q ss_pred cccccchHHHHHHHHHHHHHHHHHHHHHHHHccCCcceeeeeCC-cCCHHHHHHHHHHHHHHhcC----cccccc----- Q lcl|Aclame:pro 182 GLERGLSLMESLKSTIFSEDSSRNATAAMWKNAGRPNLVLRHEK-RLSPEAQQRLREQFDRAHAG----SSNTGK----- 251 (518) Q Consensus 182 ~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~p~gil~~~~-~~~~e~~~~~~~~~~~~~~g----~~n~g~----- 251 (518) +... +|-+..|...+....-++...--+==.-+.-+-|+.++- .+.+..+++..+.+-..|.. ..+.|. T Consensus 240 ~~~i-~syLhkAiKp~NQLkm~EDAlVIYRitRAPeRRvFYIDVGnLPk~KAeqYl~~iM~k~KNklvYDa~TGev~ddr 318 (516) T protein:vir:10 240 DRGI-VGYLHNAVKPANQLKLLEDALVIYRITRAPERRVFYIDVGNMPNRKATEYVNGIMQSLKNRVVYDSNTGTVKNQK 318 (516) T ss_pred CCce-eceehhhhHhHHhhHHHHhhHHHHhhhccccceEEEEecCCCCchhHHHHHHHHHHhcCceeEEeCCCCeeccch Confidence 2222 677788887777777666654433223333344554442 23322333333333332211 111121 Q ss_pred -cee-c-----c-----CCcccccccCChhhHHHHHHHHHHHHHHHHHhccchHhhcccccccc--ccHHHHHHH--HHH Q lcl|Aclame:pro 252 -TMV-V-----E-----EGMEPIPLQLTAVEMQFIEARQLNREEVCGVYDIAPPIVHILDRATF--SNISAQMRA--FYR 315 (518) Q Consensus 252 -~~v-l-----~-----~g~~~~~~~~~~~d~q~~e~~~~~~~~Ia~~fgVpp~~lg~~~~~~~--s~~e~~~~~--~~~ 315 (518) .+- + + .|.+++.+... +.+.-++-.++..+.+.++++||.+-++..+..+. +...+-.+. -.. T Consensus 319 k~msMlEDyWLpRReGgrgTEItTLpGg-qnlgem~DV~YF~kkLy~aLnVP~SRl~~e~~~~~~~Gr~~EItRDEiKF~ 397 (516) T protein:vir:10 319 RNLSMTEDYWLMRRDGKSVTEVTSLPGA-QTMGEMDDVRWFNKKLYEALRIPLSRMPRDDGGMVIGGQDMAITRDELDFR 397 (516) T ss_pred hhhhhHhhhcccccCCCcccceeecccc-CCcChHHHHHHHHHHHHHHhCCCcccccCCCCceeeccccchhhHHHHHHH Confidence 111 1 1 23444444322 22333344556678899999999999875333221 111222111 111 Q ss_pred HHHHHHHH----HHHHHHHhhh-----cchh--h---ccceeeechhh----hhccC-HHHHHHHHHHHH--hCCCcCHH Q lcl|Aclame:pro 316 DTMAIPIA----RIQSAMDKYV-----GQYW--V---RKNRMKFDIDD----VIQPD-WEAKSESTQKMV--NSGVATPN 374 (518) Q Consensus 316 ~~l~P~~~----~ie~~ln~~l-----~~~~--~---~~~~~~fd~~~----l~~~d-~~~~~~~~~~~~--~~g~~T~N 374 (518) .-|.-+.. .+.+.|...| ++.. . ....+.|..+. +.... ...|+..+..+- -..+++.+ T Consensus 398 KFI~rLR~rFs~lF~~~L~~qLilKgIit~eeW~~i~~~I~~~f~~Dn~f~ElKe~Eil~~Rl~~l~~~dpyvGky~s~~ 477 (516) T protein:vir:10 398 KFIVQLQHNFEEIFLDPLKTNLIYKKIILESEWEEQINNIKVNFHQDSYYTELKDIETLRQRVDALSQIEPYVGKYVSHD 477 (516) T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcCCCCHHHHHHHhhcceEEeeecchHHHHHHHHHHHHHHHHHHHhhhhhccccchH Confidence 12222333 3334444433 2211 1 12233333222 11111 123333333332 23456666 Q ss_pred HHHHH-HhCCCCCCccCceeeecccccccccccccCCCCCCCCCCCCcccCCCCCccCCc Q lcl|Aclame:pro 375 EGREI-MGLPRSDDPKADELYANSALQPLGATPDGAVEGEEAPAPKRPASTPVASLDQSP 433 (518) Q Consensus 375 E~R~~-~g~~pi~~~~gD~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 433 (518) =+|+. |.+.--+-+.-++. +. .....+--++|.+. ++- T Consensus 478 yi~k~ILr~tDeei~~~~k~--------I~-------~E~~~~~~~~p~~e------~~f 516 (516) T protein:vir:10 478 YVMKNILQMTDEQIAQEEKQ--------IE-------KEANVKRFQNPENE------DDF 516 (516) T ss_pred HHHHHHhcCCHhHHHHHHHH--------HH-------HhhhCCCCCCCCcc------ccC Confidence 56543 44432110000000 00 00000000011000 111 No 246 >protein:vir:80165 Length: 651 # NCBI annotation: portal protein # Family: family:all:1548 # MgeID: mge:1878 # MgeName: Pf-WMP3 # Cross-refs: genbank:acc:YP_001285799;genbank:gi:148747833;genbank:GeneID:5220441 Probab=77.18 E-value=0.13 Score=25.49 Aligned_cols=442 Identities=10% Similarity=0.018 Sum_probs=148.7 Q ss_pred CCCCCCCCCccccccccchh------------hhhhhccCccCCcccC--ccchhhHHHHhhhHHHHHHHHHHHHhhcc- Q lcl|Aclame:pro 1 MLLANGQTLSAPAMAELSPQ------------MQDSYYYAPAVGMQLE--RQFSLYGGIYKNQPWVRTVIAKRAQALAR- 65 (518) Q Consensus 1 ~~f~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~v~~~v~~ia~~ia~- 65 (518) -++.+-+....--.....-| ..+.+.+......... +..+ -.-.+.|+.+|+.+...+.. T Consensus 24 ~~~~~~~~~~~~r~~~~~~w~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~rs-----~~~~~~v~~~ve~~~~~l~~~ 98 (651) T protein:vir:80 24 YVKKEYKRFCDARQVCEETWLEAWGMYLSTPEAQDYLRDQVLRSVGDVNADWRH-----KITTGKAFEAIETIHAYLMSA 98 (651) T ss_pred HHHHHHHHHHHHhhhhhhhHHHHHHhhcccHHHHHhhccccccccCCCCCCCCc-----cccChhHHHHHHHHHHHHHHh Confidence 11111000000000000001 0111111100000000 0000 01235667777655444433 Q ss_pred ----Cce-EEEEecCCceeeecchHHHHHhhccCccCCHHHHHHHHHHHHHHcCCeeEEeeeCCC--------------- Q lcl|Aclame:pro 66 ----LPV-KCMFTSGDTETEEHDTGYAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQKNKS--------------- 125 (518) Q Consensus 66 ----lp~-~v~~~~~~~~~~~~~~~~~~l~~~PN~~~t~~~f~~~~~~~~ll~G~~~~~i~~~~~--------------- 125 (518) -.| .+.+..+..........+..++...-...........++.+.+++|++++.+.++.. T Consensus 99 ~~~~~~~~~~~p~~~~d~a~~~~~~~~~~~~~~l~~~~~~~~~~~~~~d~l~~G~~i~kv~we~~~~~~~~~~~~~~~~~ 178 (651) T protein:vir:80 99 TFPNKNWFDVVPAKPGQDNLLVSRLIKRYVQDKLTEGKFRAAYANFLRQLLITGNSVLALPWRVETAEVKKKVQVRTPLF 178 (651) T ss_pred hcCCCceeEeccCCchhHHHHHHHHHHHHHHHHhhccCcHHHHHHHHHhhcccCceEEEEeecceeeeeehheecccccc Confidence 222 222211110000011112222221111233556666788999999999876654311 Q ss_pred ----------------CceeeeeeeCCcceEEEeccCc------------------------------------------ Q lcl|Aclame:pro 126 ----------------GTPEKLMPMHPSRVAIKRNSRT------------------------------------------ 147 (518) Q Consensus 126 ----------------G~~~~l~~l~p~~v~~~~~~~~------------------------------------------ 147 (518) |.+ .+..++|..+.+.....+ T Consensus 179 ~~~~~~~v~~~~~~~~~~~-~i~~v~p~~~~~dp~a~~~~d~~~v~~~~~t~~~l~~l~~~g~~~~~~~~~~~~~~~~~~ 257 (651) T protein:vir:80 179 EDEPTFEVVSEEREVKSSP-DFEVLDMFDCFYDPNVTDPNRGAFIRKLTKTKADILNLLSEGYYYGVDPLDVVEHKCKDT 257 (651) T ss_pred ccccceeeeccceeeecee-EEEEecHHHeeecCCCcCccccceeeeeeeeHHHHHHHHhcccccchhhHHHHhhhcccc Confidence 110 122233222221111000 Q ss_pred -----------------------ceEEEEee--ccCCC-CceeE--EEee--------------eeeEEeecCCCCcccc Q lcl|Aclame:pro 148 -----------------------GRYEYYFQ--AGAGV-GTQLV--SFAD--------------DEVVPIRFFNPDGLER 185 (518) Q Consensus 148 -----------------------~~~~~~~~--~~~~~-~~~~~--~~~~--------------~~vih~~~~~~~~~~~ 185 (518) ....|.+. ..... +...+ .+.. ...+|++.....+..| T Consensus 258 ~~~~~~~~~~~~~~d~~~~~~~~~v~v~E~~~~~d~e~~~~~~~~v~~~g~~il~~~~~~~~~~~Pf~~~~~~~~~~~~y 337 (651) T protein:vir:80 258 SDTKQDMLSTFQGVTTSLWSPHQNVELLEYWGDIHLENKTYHDVVVTIMGNEVLRFEQNPYWCGRPFVIGTYIPTARQPY 337 (651) T ss_pred ccCCccccccccCCCccccccccceEEEEEEEEeeccCCceEEEEEEEcCcEEecccccCCCCCCCeeeecceecCcccc Confidence 00011110 00000 00000 0011 1344555554566789 Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHccCCcceeeeeCCcCCHHHHHHHHHHHHHHhcCccccccceeccCCccccccc Q lcl|Aclame:pro 186 GLSLMESLKSTIFSEDSSRNATAAMWKNAGRPNLVLRHEKRLSPEAQQRLREQFDRAHAGSSNTGKTMVVEEGMEPIPLQ 265 (518) Q Consensus 186 G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~p~gil~~~~~~~~e~~~~~~~~~~~~~~g~~n~g~~~vl~~g~~~~~~~ 265 (518) |.|++..+.........+.+.........+.|.+++..+....++.+ .. ..|++++...+..+.++. T Consensus 338 G~g~~~~~~~~q~~ln~l~~~~ld~~~~~~~~~~~v~~d~~~~~~~l-------~~------~pg~vi~~~~~~~~~~l~ 404 (651) T protein:vir:80 338 AMGALQPNLGMLHELNIITNQRLDNLELAIDQMYTLRSDGLLQPEDV-------YT------EPGKVFLVSDHGDLQPLA 404 (651) T ss_pred CCChHHHHhHHHHHHHHHHHHHHHHHHHHhCCcEEecCCccccHHHh-------hc------CCCceEEecCCCCceeec Confidence 99999999999999988888888888888888877765544444432 11 134566666665666654 Q ss_pred CChhhHH-HHHHHHHHHHHHHHHhccchHhhccccccc-cccHH--HHHHHHHHHHHHHHHHHHHHHHHhhhcch----- Q lcl|Aclame:pro 266 LTAVEMQ-FIEARQLNREEVCGVYDIAPPIVHILDRAT-FSNIS--AQMRAFYRDTMAIPIARIQSAMDKYVGQY----- 336 (518) Q Consensus 266 ~~~~d~q-~~e~~~~~~~~Ia~~fgVpp~~lg~~~~~~-~s~~e--~~~~~~~~~~l~P~~~~ie~~ln~~l~~~----- 336 (518) ..+.+.+ ......+....+-..+||+....|....+. .-+.. .....-....+.+++..+..++-.-|+.. T Consensus 405 ~~~~~~~~~~~~l~~l~~~~~~~~gv~~~~~g~~~~~~~~~TAteI~~~~~~~~~~l~~v~~~l~~e~l~pl~~r~l~l~ 484 (651) T protein:vir:80 405 NQSSNFSITYQESSFLESTIDKNFGTGNYVGANAARSGERVTAAEVAAVREAGGNRLSGIHKHIEETSLLVLLEKVMHLV 484 (651) T ss_pred cCcccchhHHHHHHHHHHHHHHHhcCChHHhCCCccchhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Confidence 4333322 234456666788899999998877644321 11111 12223334455555555554432211100 Q ss_pred --h----------hc-------------cceeeechhhhhccCHHHHHHHHHH---HHhCCCcCH------H------HH Q lcl|Aclame:pro 337 --W----------VR-------------KNRMKFDIDDVIQPDWEAKSESTQK---MVNSGVATP------N------EG 376 (518) Q Consensus 337 --~----------~~-------------~~~~~fd~~~l~~~d~~~~~~~~~~---~~~~g~~T~------N------E~ 376 (518) . +. .....+++..+-.....++...... ++..+...+ | +. T Consensus 485 ~~~~~~~~~~ri~~~~~~~~~~~~i~~~dl~~~~~iv~~g~~~~~~r~~~~~~l~~~~q~~~~~p~~~~~~~~~~~~~~l 564 (651) T protein:vir:80 485 QQFTDQPGMVRVAGDEAGAYEYYELDVEDLQKEVRLVPIGSDHVIERKQYIEDRLTFIQAVAQVPEMGQLVDYKRILVDL 564 (651) T ss_pred HHhcCcccceeecccccccccccccCccceeeeeeeeeccHHHHHHHHHHHHHHHHHHHhhccCCccchhhhHHHHHHHH Confidence 0 00 0111222111100011111111111 121111000 0 01 Q ss_pred HHHHhCCCCCCccCceeeecccccccccccccCCCCCCCCCCCCcccCCCCCccCCccccccccChhhhcchhHHHHHHH Q lcl|Aclame:pro 377 REIMGLPRSDDPKADELYANSALQPLGATPDGAVEGEEAPAPKRPASTPVASLDQSPPASVPGLSPTNSDRSTDSGKTEP 456 (518) Q Consensus 377 R~~~g~~pi~~~~gD~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 456 (518) .+.+|++ + -+.++.+.. +.++.. + .+...........+.+. T Consensus 565 ~~~~g~~---~--~~~~l~~~~--------------q~~~~~----------------~----~~~~~~q~~~~~~~a~~ 605 (651) T protein:vir:80 565 LQHWGFE---E--PEAYLKQQD--------------QQAPAN----------------P----QEALLSQAKDVGGQAMS 605 (651) T ss_pred HHHcCCC---C--cHHhcCCCc--------------cchhhh----------------h----hHHHHhhHHHHHHHHHH Confidence 1111211 0 011110000 000000 0 00000000000001111 Q ss_pred HHHhhccCcchhHHHHHHHHHHHhhhhhhhcccccchhhhhhhHHHHHHHHHHHHhh--hccc Q lcl|Aclame:pro 457 RRLMQKPPPKESSPKHLRAVKGAMGRGKDIKGFALQLAEKYPDDLEDILLAVQLALA--ERKD 517 (518) Q Consensus 457 ~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 517 (518) .. ++.+.......++.+......+.. +++-...+-.++|. |++- T Consensus 606 ~~-~~~~~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~l~~~~~~~ 651 (651) T protein:vir:80 606 NM-LQNQLQADGGTQMMSEMYGTPNAD----------------QMQQELMATTPNVSEQQLTQ 651 (651) T ss_pred HH-HHHHHHHHHHHHHHHHHHHHHHHH----------------HHHHHHHHHHHHHHHhhccC Confidence 00 000000001111111111110000 00000111111111 1111 No 247 >protein:vir:106282 Length: 521 # NCBI annotation: gp20 portal vertex protein of head # Family: family:all:1036 # MgeID: mge:1474 # MgeName: Aeh1 # Cross-refs: genbank:acc:NP_944108;genbank:gi:38640152;genbank:GeneID:2658030 Probab=76.37 E-value=0.14 Score=25.33 Aligned_cols=405 Identities=11% Similarity=0.062 Sum_probs=164.8 Q ss_pred CCCCCCCC----------------Cccccccccchhhhh-------------hhccCccCCcccCccchhhHHHHhhhHH Q lcl|Aclame:pro 1 MLLANGQT----------------LSAPAMAELSPQMQD-------------SYYYAPAVGMQLERQFSLYGGIYKNQPW 51 (518) Q Consensus 1 ~~f~~~~~----------------~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 51 (518) -||+.... ...|.....+..+.. .|.+..............|+++ +.+|- T Consensus 7 ~lf~f~~k~~e~~~~~~~~~~~~s~~~p~~~dGa~~I~~~~~~~~~~~~~~~~~~~~~~~~~n~~eLI~~YR~m-a~~pE 85 (521) T protein:vir:10 7 KLLQPWMKDDEKRVQSDLSDRIDSFAVPDTADGAIEVDKQIDTTAPKTAIVQSVLGYAPKIQNTKDLINQYRSL-SKYHE 85 (521) T ss_pred HHhhhhhhhhhhHHhhhhccCccccccccCCCCceeeccCCCccccccchhhhhhccccccchHHHHHHHHHHH-hhccc Confidence 23443211 111111111100000 0000000000111122334555 68899 Q ss_pred HHHHHHHHHHhhccC-----ceEEEEecCCceeee---cchHHHHHhhccCccCCHHHHHHHHHHHHHHcCCeeEEeeeC Q lcl|Aclame:pro 52 VRTVIAKRAQALARL-----PVKCMFTSGDTETEE---HDTGYAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQKN 123 (518) Q Consensus 52 v~~~v~~ia~~ia~l-----p~~v~~~~~~~~~~~---~~~~~~~l~~~PN~~~t~~~f~~~~~~~~ll~G~~~~~i~~~ 123 (518) |..||+-|.+.+.-. |..|--.+-+..... ....+..++.--+-...++++ ++.+++.|..|..++-+ T Consensus 86 vd~Av~eIvneaiv~d~~~~pV~i~Ld~~~~s~~iK~kI~eeF~~Il~ll~F~~~~~~~----fR~WYVDgRi~fHkiid 161 (521) T protein:vir:10 86 VDNAIDEIINDAIVQEDNRDTVYLDLDKTDWNESVKEMVREEFRTILKLLKFEREGKRH----FRRWYVDSRIYFHKMID 161 (521) T ss_pred hhhHHHhhhcceEEecCCCceEEEEecCcccchHHHHHHHHHHHHHHHHhccchhhhHH----HhhheeeeeEEEEEEee Confidence 999999999887532 333332221111111 111222233333334445554 45567899999988665 Q ss_pred C---CCceeeeeeeCCcceEEEecc----Cc-------ceEEEEeecc-------CCCCceeEEEeeeeeEEeec--CCC Q lcl|Aclame:pro 124 K---SGTPEKLMPMHPSRVAIKRNS----RT-------GRYEYYFQAG-------AGVGTQLVSFADDEVVPIRF--FNP 180 (518) Q Consensus 124 ~---~G~~~~l~~l~p~~v~~~~~~----~~-------~~~~~~~~~~-------~~~~~~~~~~~~~~vih~~~--~~~ 180 (518) . ...+.+|..|+|..++.++.. .+ ...+|.|... ++..+..++++.+.|.|... .+. T Consensus 162 ~~~pk~GI~Elr~lDPr~i~~vr~i~k~~~~~~~v~~~~~e~f~Y~~~~~~~~~~~g~~~~~vkI~~daI~y~hSGL~d~ 241 (521) T protein:vir:10 162 PARPKDGIKELRLLDPRNVEYYRVNLKSNENGNDVYKGVKEFFTYGATEDNRYNISGNSNNLVQIPIDAIVYSHSGKVDI 241 (521) T ss_pred CCCccccceeeeeeCCcceeeeeeecCCCCCcchhhccceeeeeeccCCCceecCCCCCCcceeechhheeeecccceeC Confidence 3 236899999999999754321 11 1122233211 11223446677766655542 222 Q ss_pred CcccccchHHHHHHHHHHHHHHHHHHHHHHHHccCCcceeeeeCC-cCCHHHHHHHHHHHHHHhcC----------cccc Q lcl|Aclame:pro 181 DGLERGLSLMESLKSTIFSEDSSRNATAAMWKNAGRPNLVLRHEK-RLSPEAQQRLREQFDRAHAG----------SSNT 249 (518) Q Consensus 181 ~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~p~gil~~~~-~~~~e~~~~~~~~~~~~~~g----------~~n~ 249 (518) ++ .+.+|-|..|...+....-++...--+==.-+.-+-|+.++- .+.+..+++..+.+-..+.. ..+. T Consensus 242 ~~-~~i~syLhkAiKp~NQLkm~EDAlVIYRitRAPeRRvFYIDvGnlpk~KAeqYl~~iM~k~kNklVYDa~TGev~dd 320 (521) T protein:vir:10 242 DG-KTIVGYLHNVIKPANQLKMLEDAMVIYRITRAPERRVFYIDVGTMPNKKATQHLNNVMQGLKNRVVYDSSTGKVKNS 320 (521) T ss_pred CC-CceeccchhhhHhHHhhHHHHhhHHHHhhhccccceEEEEecCCCCchhHHHHHHHHHHhcCceEEEeccCceeccc Confidence 33 457899999998888887777765444333333344554442 23322233333333222211 1111 Q ss_pred cccee-c-----c-----CCcccccccCChhhHHHHHHHHHHHHHHHHHhccchHhhccccc-cccccHHHH---HHHHH Q lcl|Aclame:pro 250 GKTMV-V-----E-----EGMEPIPLQLTAVEMQFIEARQLNREEVCGVYDIAPPIVHILDR-ATFSNISAQ---MRAFY 314 (518) Q Consensus 250 g~~~v-l-----~-----~g~~~~~~~~~~~d~q~~e~~~~~~~~Ia~~fgVpp~~lg~~~~-~~~s~~e~~---~~~~~ 314 (518) .+.+- + + .|.+++.+... +.+.-++-.++..+.+.++++||.+-++..+. -+.+-..+- ...|. T Consensus 321 rk~msMlEDyWLpRReGgrgTEI~TLpgg-qnlgem~DV~YF~kkLy~aLnVP~sRl~~e~~~f~~Gr~~EItRDEikF~ 399 (521) T protein:vir:10 321 SNNLAMTEDYWLMRRDGKATTEVSTLPGA-QSMGEMDDVRWFNRKLYESMKIPLSRLPQEGAGVTFGAGNDITRDELQFT 399 (521) T ss_pred hhhhhhHhhhcccccCCCCccceeecccc-CCcChHHHHHHHHHHHHHHhCCCccccCCCCCceecccccchhHHHHHHH Confidence 11111 1 1 23444444322 22333344556678899999999998864321 111111111 11122 Q ss_pred HHHHHHHHHHHHHHHHhhh---------cch--hh---ccceeeechhh----hhccC-HHHHHHHHHHHHh----CCCc Q lcl|Aclame:pro 315 RDTMAIPIARIQSAMDKYV---------GQY--WV---RKNRMKFDIDD----VIQPD-WEAKSESTQKMVN----SGVA 371 (518) Q Consensus 315 ~~~l~P~~~~ie~~ln~~l---------~~~--~~---~~~~~~fd~~~----l~~~d-~~~~~~~~~~~~~----~g~~ 371 (518) .-|.-+..++...+...| ++. +. ....+.|..+. +.... ...|...+..+-. .-++ T Consensus 400 -KFI~rLR~rFs~~f~~~L~~qLilKgiit~eew~~i~~~I~~~f~~Dn~f~ElKe~eil~~R~~~l~~~dp~~yvGky~ 478 (521) T protein:vir:10 400 -KYIRGLQQQFEPIFLNPLRTNLMLKGKMSVSEWEEQAENIKVVFSKDSYYEEIKDVEILERRVNLVQTLASAEVTGKYL 478 (521) T ss_pred -HHHHHHHHHHHHHHHHHHHHhhhhccCCCHHHHHHHhhcceEEeeecchHHHHHHHHHHHHHHHHHHhhcCcccccccc Confidence 223333344443333322 121 11 12233333222 11111 1233444443311 1245 Q ss_pred CHHHHHHH-HhCCCCCCccCceeeecccccccccccccCCCCCCCCCCCCcccCCCCCccCCc Q lcl|Aclame:pro 372 TPNEGREI-MGLPRSDDPKADELYANSALQPLGATPDGAVEGEEAPAPKRPASTPVASLDQSP 433 (518) Q Consensus 372 T~NE~R~~-~g~~pi~~~~gD~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 433 (518) +.+=+|+. |.+.--+-..-++ ..+... ..+--++| ..+. ++- T Consensus 479 s~dyi~k~ILr~tDeeik~~~k------------~I~~E~---~~~~~~~p----~~e~-~df 521 (521) T protein:vir:10 479 SHEYVMKNILRMSDEDIKTERE------------KIDGEL---KDSVYKNP----EDPM-EEF 521 (521) T ss_pred chHHHHHHHhcCCHhHHHHHHH------------HHHHhh---hCCCCCCC----cchh-hcC Confidence 55545443 4443111000000 000000 00000000 0000 111 No 248 >protein:vir:95014 Length: 491 # NCBI annotation: structural protein # Family: family:all:584 # MgeID: mge:1547 # MgeName: KS7 # Cross-refs: genbank:acc:YP_224035;genbank:gi:62327322;genbank:GeneID:5176842 Probab=74.02 E-value=0.16 Score=24.90 Aligned_cols=396 Identities=11% Similarity=0.077 Sum_probs=162.4 Q ss_pred CCCCCCCCCccccc-------cccchhhhhhhccCcc-----CCcc-cCccc-hhhHHHHhh----hHHHHHHHHHHHHh Q lcl|Aclame:pro 1 MLLANGQTLSAPAM-------AELSPQMQDSYYYAPA-----VGMQ-LERQF-SLYGGIYKN----QPWVRTVIAKRAQA 62 (518) Q Consensus 1 ~~f~~~~~~~~~~~-------~~~~~~~~~~~~~~~~-----~~~~-~~~~~-~~~~~~~~~----~~~v~~~v~~ia~~ 62 (518) |+-++++-...... ...-..+.+..+|... .+.+ ..+.. ......++. .+++...++.++.. T Consensus 1 ~~~~~~~~~~V~~~hp~y~a~~~~W~~ird~~~G~~~~~~r~~yl~~~~~~~~e~~Y~~rl~rA~~~n~~~~tl~~l~G~ 80 (491) T protein:vir:95 1 MLTANGQGSGVKTKHREWLHYAPKWQKVRHALAGDLVGYLRNVGLNEPDKAYGEARQAEYEAGGIVYNFTRRTLSGMVGS 80 (491) T ss_pred CcccCCccCCCCccCHHHHHHHHHHHHHHHHhcCcchhhcccCCCcCCCCCCCHHHHHHHHhcccCCChHHHHHHHHhch Confidence 77766554433311 1111222333443211 1111 01101 111122222 24455555555555 Q ss_pred hccCceEEEEecCCceeeecchHHHHHhhccC-ccCCHHHHHHHHHHHHHHcCCeeEEeeeCCCCc------------ee Q lcl|Aclame:pro 63 LARLPVKCMFTSGDTETEEHDTGYAKLLADPC-EYLDPFAFWEWVASTLDIYGETYLAIQKNKSGT------------PE 129 (518) Q Consensus 63 ia~lp~~v~~~~~~~~~~~~~~~~~~l~~~PN-~~~t~~~f~~~~~~~~ll~G~~~~~i~~~~~G~------------~~ 129 (518) +-+-|..+ ... ..+..|+..-. ...+..+|.+.++...+.+|.+++++.....+. |. T Consensus 81 vfrk~p~~---------~~p-~~l~~l~~d~D~~G~~L~~f~~~~~~~~l~~G~~~ilVD~P~~~~~T~Ade~~~~~rPy 150 (491) T protein:vir:95 81 VMRKEPEI---------NIP-KELEYLLKNADGSGVGLIQHAQDTLMEIDSVGRGGLLVDAPETAAATAAEQNAGLLNPT 150 (491) T ss_pred hhcCCcee---------ecc-HHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCeEEEEEecCCCcccCHHHHHHhcCCcE Confidence 54444433 111 22334444333 356889999999999999999999987765432 11 Q ss_pred eeeeeCCcce-----------------EEEe-----c---cCcc--eEEEEeecc-------------CCCCcee----- Q lcl|Aclame:pro 130 KLMPMHPSRV-----------------AIKR-----N---SRTG--RYEYYFQAG-------------AGVGTQL----- 164 (518) Q Consensus 130 ~l~~l~p~~v-----------------~~~~-----~---~~~~--~~~~~~~~~-------------~~~~~~~----- 164 (518) +..+.|..| .+.. + .++. ...|++..- ...++.. T Consensus 151 -~~~~~~~~IinW~~~~v~g~~~L~~v~l~E~~~~~d~~~~f~~~~~~qyRvL~l~~~g~~~~~v~r~~~~g~~~~~~~~ 229 (491) T protein:vir:95 151 -IAFYTTENIVNWRLTRVGSVNRVTMVVLRETWEYHEPGNEFETKYGEQYRVLDIDTDGNYRQRLFRFDAEGGAQEEVVE 229 (491) T ss_pred -EEEechhhhcCceeeeeCCceeeeEEEEEEeEEeecCCCCcccceEEEEEEEeecCCCceEEEEEEEcCCCcceeeeee Confidence 222222222 1110 0 0111 111111100 0000000 Q ss_pred -------EEEeeeeeEEeecCCCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHccCCcceeeeeCCcCCHHHHHHHHH Q lcl|Aclame:pro 165 -------VSFADDEVVPIRFFNPDGLERGLSLMESLKSTIFSEDSSRNATAAMWKNAGRPNLVLRHEKRLSPEAQQRLRE 237 (518) Q Consensus 165 -------~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~p~gil~~~~~~~~e~~~~~~~ 237 (518) ..+..-.++.+-.. ..+...|.||+..++..-..+.....-....+...+.|-.+++.....+++..+.... T Consensus 230 ~~~~~g~~~l~~IPfv~~~~~-~~~~~~~~pPLl~LA~lni~Hy~~ssd~~~~l~~~~~P~l~~~G~d~~~~~~~~~~~~ 308 (491) T protein:vir:95 230 IYPDLGESLRGVIPFTFIGAT-NNDATIDDAPLLPLAELNIGHYRNSADNEESSFVVGQPTLFIYPGDNLTPQSFKEANP 308 (491) T ss_pred eeecCCCcccCeeEEEEEecC-CCCCCCCcCchHHHHHHHHHHhhhhhHHHHHHHHcccceeeeecCcccCcchhhccCc Confidence 00111122223222 2344568888887765433333333334556667788888877655555443322111 Q ss_pred HHHHHhcCccccccceeccCCcccccccCChhhHHH--HHHHHHHHHHHHHHhccchHhhccccccccccHHHHHHHHHH Q lcl|Aclame:pro 238 QFDRAHAGSSNTGKTMVVEEGMEPIPLQLTAVEMQF--IEARQLNREEVCGVYDIAPPIVHILDRATFSNISAQMRAFYR 315 (518) Q Consensus 238 ~~~~~~~g~~n~g~~~vl~~g~~~~~~~~~~~d~q~--~e~~~~~~~~Ia~~fgVpp~~lg~~~~~~~s~~e~~~~~~~~ 315 (518) ....-|++ ..+.++.|.++.-+...+..+.- ++-++.+...+ |. .++--. ..--+........... T Consensus 309 --~~i~~g~~---~~~~lP~~~~~~~ie~~~~~~~~~~l~~~e~qm~~~----Ga--~l~~~~-~~~Ta~~~~~~~~~~~ 376 (491) T protein:vir:95 309 --NGIKFGSR---CGHNLGYGGSAQLIQAGENNLARQNMLDKEQQAIQI----GA--QLITPS-QQITAESARIQRGADT 376 (491) T ss_pred --ceeEecCc---CCcCCCCCCccceeecCcchHHHHHHHHHHHHHHHH----HH--HhccCC-cchhHHHHHHHHHHhh Confidence 11222322 24556666555544444333321 11112222222 11 222111 1111122233344556 Q ss_pred HHHHHHHHHHHHHHHhhhc--ch-hh----ccceeeechhhhh-ccCHHHHHHHHHHHHhCCCcCHHHHHHHHhCCCCCC Q lcl|Aclame:pro 316 DTMAIPIARIQSAMDKYVG--QY-WV----RKNRMKFDIDDVI-QPDWEAKSESTQKMVNSGVATPNEGREIMGLPRSDD 387 (518) Q Consensus 316 ~~l~P~~~~ie~~ln~~l~--~~-~~----~~~~~~fd~~~l~-~~d~~~~~~~~~~~~~~g~~T~NE~R~~~g~~pi~~ 387 (518) ..|.-++..+++++++.|- .. .+ ....+.++.+-.. ..|.. ..+.+-++++.|.|+....++.+-.--+.+ T Consensus 377 S~L~~~a~~~e~al~~~l~~~a~w~G~~~~~~v~i~~n~dF~~~~~~~~-~~~all~~~~~G~is~~t~~~~L~~~~vl~ 455 (491) T protein:vir:95 377 SVMATIARNVSQAYTDALRWVAMMLGKPEDSEVEFQLNMDFFLQPMTAQ-DRAAWMADINAGLLPATAYYAALRKAGVTD 455 (491) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCceEEEeecccccccCCHH-HHHHHHHHHhcCCCCHHHHHHHHHhCCCCC Confidence 6778888888988887642 11 11 1222333333222 22344 466666788899999999888764322221 Q ss_pred ccCceeee--cccccccccccccCCCCCCCCCCCCcccCCCCCccCCccccccccC Q lcl|Aclame:pro 388 PKADELYA--NSALQPLGATPDGAVEGEEAPAPKRPASTPVASLDQSPPASVPGLS 441 (518) Q Consensus 388 ~~gD~~~~--~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 441 (518) +.-++..- .....+++.. +..+...++.+.+ ..+ T Consensus 456 ~~~e~~~~~ie~~~~~~~~~------~~~~~~~~~~~~~--------------~~~ 491 (491) T protein:vir:95 456 WTDEDILNAIEDAPLPSGAV------TQVAGEIPQAAQQ--------------QQE 491 (491) T ss_pred ccHHHHHHHHHhcCCCCCcc------ccccccchhhhhh--------------ccC Confidence 11111000 0000000000 0000000000000 000 No 249 >protein:vir:81017 Length: 521 # NCBI annotation: gp20 portal vertex protein of head # Family: family:all:1036 # MgeID: mge:1888 # MgeName: Phi1 # Cross-refs: genbank:acc:YP_001469501;genbank:gi:157311458;genbank:GeneID:5602316 Probab=73.95 E-value=0.16 Score=24.89 Aligned_cols=406 Identities=8% Similarity=0.015 Sum_probs=158.1 Q ss_pred CCCCC------------CCCCccccccccchhhhhhh-------ccCccCCcccC-------ccchhhHHHHhhhHHHHH Q lcl|Aclame:pro 1 MLLAN------------GQTLSAPAMAELSPQMQDSY-------YYAPAVGMQLE-------RQFSLYGGIYKNQPWVRT 54 (518) Q Consensus 1 ~~f~~------------~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~-------~~~~~~~~~~~~~~~v~~ 54 (518) -+|+- ..+..+|.....+.-+.... ++..+.-+.+. .....|+++ +.+|-|.. T Consensus 10 ~~~~~~~~~~~~~~~~~~~s~~~P~~~dGa~~i~~~~~~~~~~~gg~~~~~~~~e~~~~~~~eLI~~YR~m-a~~pEvd~ 88 (521) T protein:vir:81 10 RWADFDNDKYEEQIKDKAESIAAPKNNDGATEVEINDNLPASAWNSLTQQFYSTDQKISTTKQLVNTYRGL-MNNHEVEN 88 (521) T ss_pred hhcCchhhhHHhhhccCccccccCCCCCCceEecccCCCcceeecceeeeecccccchhhHHHHHHHHHHH-hhccchhh Confidence 12221 12222221111111000000 00000000011 112334555 68899999 Q ss_pred HHHHHHHhhcc-----CceEEEEecCCceee---ecchHHHHHhhccCccCCHHHHHHHHHHHHHHcCCeeEEeeeCC-- Q lcl|Aclame:pro 55 VIAKRAQALAR-----LPVKCMFTSGDTETE---EHDTGYAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQKNK-- 124 (518) Q Consensus 55 ~v~~ia~~ia~-----lp~~v~~~~~~~~~~---~~~~~~~~l~~~PN~~~t~~~f~~~~~~~~ll~G~~~~~i~~~~-- 124 (518) ||+-|.+.+.- -|..|--.+-+-... .....+..++.--+-...++++ ++.+++.|..|..++-+. T Consensus 89 Av~eIVneaiv~d~~~~pV~l~L~~~~~s~~iK~kI~eeF~~Il~ll~F~~~~~~~----fR~WYVDgRi~fhkiid~~p 164 (521) T protein:vir:81 89 AVQNIVNDAIVFEEGHEVVSLNLEATGFSESVKERIHEEFKDLLNTIQFDRRGQDM----FRRWYVDSRIFFHKIIGKNP 164 (521) T ss_pred HHHHhhcceeEecCCCceEEEEecccccchHHHHHHHHHHHHHHHHhccchhhhHH----HhhhhhcceEEEEEEEcCCc Confidence 99999988753 233332221111111 1111222233333334445554 455678999999998543 Q ss_pred CCceeeeeeeCCcceEEEeccC-----c------ceEEEEeeccCC---------CCceeEEEeeeeeEEeecCCCC-cc Q lcl|Aclame:pro 125 SGTPEKLMPMHPSRVAIKRNSR-----T------GRYEYYFQAGAG---------VGTQLVSFADDEVVPIRFFNPD-GL 183 (518) Q Consensus 125 ~G~~~~l~~l~p~~v~~~~~~~-----~------~~~~~~~~~~~~---------~~~~~~~~~~~~vih~~~~~~~-~~ 183 (518) ...+.+|..|+|..++.++.-. + ...+|.|...+. ..+..++++.+-|.+..-.-.+ +. T Consensus 165 k~GI~Elr~lDPr~i~~vr~i~k~~~~~~~v~~~~~e~f~Y~~~~~~~~~~g~~~~~~~~vkI~~dAI~y~hSGl~d~~~ 244 (521) T protein:vir:81 165 KDGIVELRQLDPRNLEYVREIITEDTPEGKIYKATKEYFIYTVGNSSYCAGGQVFSPNSRVKIPRSAITYAHSGLMDCDD 244 (521) T ss_pred cccceeeeeeCCcceeeeeeecccccCccceecceeeeeeeecCCccccccceeecCCcceeechhheeeeeccceeCCC Confidence 3568999999999988664321 1 112233322110 1233455555554443321111 11 Q ss_pred cccchHHHHHHHHHHHHHHHHHHHHHHHHccCCcceeeeeCC-cCCHHHHHHHHHHHHHHhcC----------ccccccc Q lcl|Aclame:pro 184 ERGLSLMESLKSTIFSEDSSRNATAAMWKNAGRPNLVLRHEK-RLSPEAQQRLREQFDRAHAG----------SSNTGKT 252 (518) Q Consensus 184 ~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~p~gil~~~~-~~~~e~~~~~~~~~~~~~~g----------~~n~g~~ 252 (518) ..=+|-+..|...+....-++...--+==.-+.-+-|+.++- .+.+..+++..+.+-..|.. ..+..+. T Consensus 245 ~~i~syLhkAiKp~NQLkm~EDAlVIYRitRAPeRRvFYIDvGnlpk~KAeqYl~~im~k~kNklvYDa~TGev~ddrk~ 324 (521) T protein:vir:81 245 KYIIGYLHRAVKPANQLKLLEDAMVVYRITRAPERRVFFIDTGNMNNRKAAQHMNSVAQSFKNRVVYDASTGKLKNQQAN 324 (521) T ss_pred CeeeecchhhhHhHHhhHHHHhhHHHHhhhccccceEEEEecCCCCchhHHHHHHHHHHhcCceeEeecccccccccccc Confidence 123677888888877777777654433223333344555542 23333333333333333322 1111122 Q ss_pred ee-cc----------CCcccccccCChhhHHHHHHHHHHHHHHHHHhccchHhhccccccccc--cHHHH---HHHHHHH Q lcl|Aclame:pro 253 MV-VE----------EGMEPIPLQLTAVEMQFIEARQLNREEVCGVYDIAPPIVHILDRATFS--NISAQ---MRAFYRD 316 (518) Q Consensus 253 ~v-l~----------~g~~~~~~~~~~~d~q~~e~~~~~~~~Ia~~fgVpp~~lg~~~~~~~s--~~e~~---~~~~~~~ 316 (518) +- ++ .|.+++.+... +.+.-++-.++..+.+.++++||.+-++..+.+.++ ...+- ...|.. T Consensus 325 msMlEDyWLpRReGgrgTEItTLpGg-qnlgem~DV~YF~kkLy~aLnVP~sRl~~e~~~~~~~Gr~~EItRDEiKF~K- 402 (521) T protein:vir:81 325 LSMTEDYWLQRRDGKAITDVTTLPGA-SGMSDIDDIRYFNRKLYEALRVPLSRSNLSDANMVIGGDGSEITRDELEFSK- 402 (521) T ss_pred cchhhhhcccccCCCcccceeecccC-CCCChHHHHHHHHHHHHHHhCCccccccCCCCcceeccccchhhHHHHHHHH- Confidence 21 11 23444444321 223333445566788999999999999543322211 11111 112221 Q ss_pred HHHHHHHHHHHHHH----hhh-----cchh--h---ccceeeechhh----hhccC-HHHHHHHHHHHHh--CCCcCHHH Q lcl|Aclame:pro 317 TMAIPIARIQSAMD----KYV-----GQYW--V---RKNRMKFDIDD----VIQPD-WEAKSESTQKMVN--SGVATPNE 375 (518) Q Consensus 317 ~l~P~~~~ie~~ln----~~l-----~~~~--~---~~~~~~fd~~~----l~~~d-~~~~~~~~~~~~~--~g~~T~NE 375 (518) -|.-+..++...+. ..| ++.. . ....+.|..+. +.... ...|...+..+-. .-.++.+= T Consensus 403 FI~rLR~rFs~lf~~~L~~qLilKgiit~eew~~i~~~I~~~f~~Dn~f~ElKe~Eil~~R~~~l~~~dpyvGky~s~dy 482 (521) T protein:vir:81 403 FIRTRQSQFSEVLRDPLKYNLILKNVITEDDWDREINNIKVVFHRDSYYTEVKDAEILERRIGLIERITPYIGKYFSNQT 482 (521) T ss_pred HHHHHHHHHHHHHHHHHHHhhhhhcCCCHHHHHHHhhcceEEEeecchHHHHHHHHHHHHHHHHHHHhhhhhccccchHH Confidence 23333333333333 332 2211 1 12233333222 11111 1223333332211 11334444 Q ss_pred HHHH-HhCCCCCCccCceeeecccccccccccccCCCCCCCCCCCCcccCCCCCccCCc Q lcl|Aclame:pro 376 GREI-MGLPRSDDPKADELYANSALQPLGATPDGAVEGEEAPAPKRPASTPVASLDQSP 433 (518) Q Consensus 376 ~R~~-~g~~pi~~~~gD~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 433 (518) +|+. |.+.--+-..-++ . +.. ....+--+ .+..+. ++- T Consensus 483 i~k~ILr~tDeei~~~~k-----~---I~~-------E~~~~~~~----~p~~~~-~~f 521 (521) T protein:vir:81 483 VMRDILKYTDDQMDTEKK-----Q---IEE-------EANDPRFK----QTPDEI-EDF 521 (521) T ss_pred HHHHHhccCHHHHHHHHH-----H---HHH-------HhhCCCCC----CCcccc-cCC Confidence 4332 3332110000000 0 000 00000000 000000 001 No 250 >protein:vir:78696 Length: 542 # NCBI annotation: head to tail connector # Family: family:all:481 # MgeID: mge:1856 # MgeName: Syn5 # Cross-refs: genbank:acc:YP_001285446;genbank:gi:148724480;genbank:GeneID:5220167 Probab=72.42 E-value=0.18 Score=24.63 Aligned_cols=384 Identities=13% Similarity=0.113 Sum_probs=136.7 Q ss_pred CCCCCCCCCccccccccchhhhhhhccCccCCcccCccchhhHHHHhhhHHHHHHHHHHHHhhc--cCceEEEEecCCc- Q lcl|Aclame:pro 1 MLLANGQTLSAPAMAELSPQMQDSYYYAPAVGMQLERQFSLYGGIYKNQPWVRTVIAKRAQALA--RLPVKCMFTSGDT- 77 (518) Q Consensus 1 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~v~~ia~~ia--~lp~~v~~~~~~~- 77 (518) ++|......... ...+.+..+. .-++......+...+- +-||.=....+.. T Consensus 33 ~~~~~~~~~~~~---------------------~~~~~~dstg-----~~a~~~Laa~l~~~ltpp~~~WF~l~~~d~~l 86 (542) T protein:vir:78 33 YLLTEDGHASGG---------------------RLQQPYQSLG-----SKGVNALSSKLMLSLFPIQTSFFKLQINDAEI 86 (542) T ss_pred ccCCCCCCcccc---------------------cccccccchH-----HHHHHHHHHHHHHhhcCCCCccccccCCHHHH Confidence 333221100000 0000011010 1234444444444442 3555322211100 Q ss_pred ------ee----eecc------hHHHHHhhccCccCCHHHHHHHHHHHHHHcCCeeEEeeeCCCCceeeeeeeCCcceEE Q lcl|Aclame:pro 78 ------ET----EEHD------TGYAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQKNKSGTPEKLMPMHPSRVAI 141 (518) Q Consensus 78 ------~~----~~~~------~~~~~l~~~PN~~~t~~~f~~~~~~~~ll~G~~~~~i~~~~~G~~~~l~~l~p~~v~~ 141 (518) .. +... ..+...+.+- +++.=+..++.+++.+||+.+++..+ +...||+. ++.+ T Consensus 87 ~~~~~~~~~~~~~v~~~L~~ve~~~~~~l~~s----nf~~~~~~~~~~L~~~G~a~l~~~~~----~~~~~pl~--~y~v 156 (542) T protein:vir:78 87 ASVPELTPEVRSEIDMNLSKMEKMVMQQIAES----SDRVQLTAAMKHLIVTGNVLVFAGKK----TLKVYPLD--RYVI 156 (542) T ss_pred HhhccCChhhHHHHHHHHHHHHHHHHHHHHhc----CcHHHHHHHHHHHHhhCeEEEEecCC----CceEEecc--eeEE Confidence 00 0000 1111222222 34444556677888899998776432 23344542 3333 Q ss_pred EeccCcceEEE---------------------------------------------------------------EeeccC Q lcl|Aclame:pro 142 KRNSRTGRYEY---------------------------------------------------------------YFQAGA 158 (518) Q Consensus 142 ~~~~~~~~~~~---------------------------------------------------------------~~~~~~ 158 (518) ..+..|..... +....+ T Consensus 157 ~~d~~G~vd~v~r~~~~t~~ql~~~fg~~~l~~~~~~~~~~~~~~~~~v~~~v~pr~~~~~~~~~~~~~~~~s~~~e~~g 236 (542) T protein:vir:78 157 ERDGDGNVIEIITRELVDRSLLPAEFQKQSLLEGKDSNAVGEDGPKFGVAQGKGGRNDAEVFTCCKLVDGQHRWHQECDG 236 (542) T ss_pred eeCCCCCeEEEeeeeecCHHHHHHhhccccCchHHHhhccccCCCeEEEEEEeecccCCccccccccCCCeEEEEEEecc Confidence 44433321100 000000 Q ss_pred CC-Cc--eeEEEeeeeeEEeecCCCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHccCCcceeeeeCCcCCHHHHHHH Q lcl|Aclame:pro 159 GV-GT--QLVSFADDEVVPIRFFNPDGLERGLSLMESLKSTIFSEDSSRNATAAMWKNAGRPNLVLRHEKRLSPEAQQRL 235 (518) Q Consensus 159 ~~-~~--~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~p~gil~~~~~~~~e~~~~~ 235 (518) .. .+ ....|.....+-.|....++..||.||.+-+...+.....+.+...........|..++.-+....+... T Consensus 237 ~~v~~~~~e~g~~~~P~i~~Rw~~~~ge~YGrgp~~~~l~D~k~L~~l~~~~l~~~~~a~~pp~lv~~~g~~~~~~~--- 313 (542) T protein:vir:78 237 KEIKGSRSSSPLKHSPWLPLRFNVVDGESYGRGRVEEFFGDLSSLDALTRSLIEGSAAAAKVVFMVSPSATTKPQSL--- 313 (542) T ss_pred ccccccccccccccCCceeeeeeecCCCccccchHHHHHHHHHHHHHHHHHHHHHHHHHhcCceeeccccccchhhc--- Confidence 00 00 0001222234445555556778999999999999999999999999999988888766544333333221 Q ss_pred HHHHHHHhcCccccccceecc--CCcccccccCChhhHH-HHHHHHHHHHHHHHHhccchHhhccccccccccHHH--HH Q lcl|Aclame:pro 236 REQFDRAHAGSSNTGKTMVVE--EGMEPIPLQLTAVEMQ-FIEARQLNREEVCGVYDIAPPIVHILDRATFSNISA--QM 310 (518) Q Consensus 236 ~~~~~~~~~g~~n~g~~~vl~--~g~~~~~~~~~~~d~q-~~e~~~~~~~~Ia~~fgVpp~~lg~~~~~~~s~~e~--~~ 310 (518) ..+.. | .++.. +++...++.. +.+.+ ..+..+.....|-.+|-+. . ..++..-+.++ .. T Consensus 314 -------~~~~~--g-~iv~g~~~~v~~~~~~~-~~~~~~~~~~i~~~~~rI~~aFl~~----~-~~d~~rvTAtEV~~r 377 (542) T protein:vir:78 314 -------ARAGT--G-AIIQGRAEDVSVVQANK-GADFRTVQEMIRDLSQRISDAFLIL----N-VRQSERTTATEVREV 377 (542) T ss_pred -------ccCCC--c-eeecCCccceeeeeccc-ccchhHHHHHHHHHHHHHHHHhccc----c-cCCcccccHHHHHHH Confidence 11111 1 12222 2233333332 22333 2445556667787887432 1 11111112222 22 Q ss_pred HHHHHHHHHHHHHHHHHHHHhh-------------hcchhhccceeeechhhhh-----ccCHHHHHHHHHHHHhC-C-- Q lcl|Aclame:pro 311 RAFYRDTMAIPIARIQSAMDKY-------------VGQYWVRKNRMKFDIDDVI-----QPDWEAKSESTQKMVNS-G-- 369 (518) Q Consensus 311 ~~~~~~~l~P~~~~ie~~ln~~-------------l~~~~~~~~~~~fd~~~l~-----~~d~~~~~~~~~~~~~~-g-- 369 (518) ..-....|.|.+.+++.+|=.- +++..... .+++.+...+ ..+......++..+-.. | T Consensus 378 ~~E~~~~LG~v~~rl~~E~L~Pli~R~~~il~r~g~lP~~p~~-lv~~~~~s~La~~~r~~~~~~l~~~~~~i~~~~~p~ 456 (542) T protein:vir:78 378 QMELDRQLSGIYGSLTVELLTPYLNRKLHLMQRSKQLPSLPKG-LVMPTVVAGLGGVGRGEDRAALIEFMQTVGQAMGPE 456 (542) T ss_pred HHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCchh-ceeeeeechHHHHHHHHHHHHHHHHHHHHHHhcCCh Confidence 2333445556555555544322 23332221 1233222211 11111112222211110 0 Q ss_pred ----CcCHHH----HHHHHhCCCC---CCccCceeeecc-c---ccccccccccCCCCCCCCCCCCcccCCCCCccCCcc Q lcl|Aclame:pro 370 ----VATPNE----GREIMGLPRS---DDPKADELYANS-A---LQPLGATPDGAVEGEEAPAPKRPASTPVASLDQSPP 434 (518) Q Consensus 370 ----~~T~NE----~R~~~g~~pi---~~~~gD~~~~~~-n---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 434 (518) .+..++ +.+.+|.|+. ..+ ++.-... . .........+.......+..........++.+..+. T Consensus 457 ~l~~~id~d~~~~~~a~~~Gvp~~~i~~s~--e~~~~~~~q~q~~~~~~al~~~a~~~a~~~~~~~~~~~~~a~~~~~~~ 534 (542) T protein:vir:78 457 ALQQFIDPTEFLKRLAAASGIDTLNLVKSP--ETMANEAQQAQQQQMTASLMGQAGQLAKSPIGEKMMQQINAPGQEAPA 534 (542) T ss_pred hHHhcCCHHHHHHHHHHHcCCCHhhccCCH--HHHHHHHHHHHHHHHHHHHHHhhhhccccccccchhhhcCCCCcCCCC Confidence 112222 2223344421 000 0000000 0 000000000000000000000111111111111111 Q ss_pred ccccccCh Q lcl|Aclame:pro 435 ASVPGLSP 442 (518) Q Consensus 435 ~~~~~~~~ 442 (518) ....+.+. T Consensus 535 ~~~~~~~~ 542 (542) T protein:vir:78 535 GPQTGEDL 542 (542) T ss_pred CCcccccC Confidence 11111111 No 251 >protein:vir:6596 Length: 521 # NCBI annotation: portal vertex protein of head # Family: family:all:1036 # MgeID: mge:139 # MgeName: RB49 # Cross-refs: genbank:acc:NP_891727;genbank:gi:33620636;genbank:GeneID:1725288 Probab=67.22 E-value=0.26 Score=23.83 Aligned_cols=406 Identities=8% Similarity=0.024 Sum_probs=160.3 Q ss_pred CCCCCCCCCccccccccchhhh----h---hhccCccCCcccCc-------cchhhHHHHhhhHHHHHHHHHHHHhhcc- Q lcl|Aclame:pro 1 MLLANGQTLSAPAMAELSPQMQ----D---SYYYAPAVGMQLER-------QFSLYGGIYKNQPWVRTVIAKRAQALAR- 65 (518) Q Consensus 1 ~~f~~~~~~~~~~~~~~~~~~~----~---~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~v~~~v~~ia~~ia~- 65 (518) -+-.+..+..+|-....+..+. . .+++.-+..+.+.. ....|+++ +.+|-|..||+-|.+.+.- T Consensus 22 ~~~~~~~s~~~p~~~dGa~~i~~~~~~~~~~~~g~~~~~~~~e~~~~~~~eLI~~YR~m-a~~pEvd~Av~eIVneaiv~ 100 (521) T protein:vir:65 22 QIKDKAESIAAPKNNDGATEVEINDNSPASSWNSLTQQFYSTDQKISTTKQLVNTYRGL-MNNHEVENAVQNIVNDAIVF 100 (521) T ss_pred hhccCCCcccCCCCCCCceeecccCCccccccccceeeeccccchhhhHHHHHHHHHHH-hhccchhhHHHHhhcceeEe Confidence 2222222222221111111111 0 01111111111111 12234454 6889999999999988753 Q ss_pred ----CceEEEEecCCceee---ecchHHHHHhhccCccCCHHHHHHHHHHHHHHcCCeeEEeeeCC--CCceeeeeeeCC Q lcl|Aclame:pro 66 ----LPVKCMFTSGDTETE---EHDTGYAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQKNK--SGTPEKLMPMHP 136 (518) Q Consensus 66 ----lp~~v~~~~~~~~~~---~~~~~~~~l~~~PN~~~t~~~f~~~~~~~~ll~G~~~~~i~~~~--~G~~~~l~~l~p 136 (518) -|..|--.+-+-... .....+..++.--+-...++++ ++.+++.|..|..++-+. ...+.+|..|+| T Consensus 101 d~~~~pV~l~L~~~~~s~~iK~kI~eeF~~Il~ll~F~~~~~~~----fR~WYVDgRi~fhkiid~~pk~GI~ELr~lDP 176 (521) T protein:vir:65 101 EEGHEVVSLNLEATGFSESVKERIHEEFKDLLNTIQFDRRGQDM----FRRWYVDSRIFFHKIIGKNPKDGIVELRQLDP 176 (521) T ss_pred cCCCceEEEEecccccchHHHHHHHHHHHHHHHHhccchhhhHH----HhhhhhcceeEEEEEEcCCccccceeeeeeCC Confidence 233332221111111 1111222233333344445554 455678999999998543 356899999999 Q ss_pred cceEEEeccC-----c-----c-eEEEEeeccCC---------CCceeEEEeeeeeEEeecCCC-CcccccchHHHHHHH Q lcl|Aclame:pro 137 SRVAIKRNSR-----T-----G-RYEYYFQAGAG---------VGTQLVSFADDEVVPIRFFNP-DGLERGLSLMESLKS 195 (518) Q Consensus 137 ~~v~~~~~~~-----~-----~-~~~~~~~~~~~---------~~~~~~~~~~~~vih~~~~~~-~~~~~G~s~~~~~~~ 195 (518) ..++.++.-. + + ..+|.|...+. ..+..++++.+-|.+..-.-. .+...=+|-|..|.. T Consensus 177 r~i~~vr~i~k~~~~~~~v~~~~~e~f~Y~~~~~~~~~~g~~~~~~~~vkI~~dAI~y~hSGl~d~~~~~i~syLhkAiK 256 (521) T protein:vir:65 177 RNLEYVREIITEDTPEGKIYKATKEYFIYTVGNSSYCAGGQVFSPNSRVKIPRSAITYAHSGLMDCDDKYIIGYLHRAVK 256 (521) T ss_pred cceeeeeeecccccCCcceecceeeeeeeecCCcceeccceeecCCcceeechhheeeeeccceeCCCCeeeecchhhhH Confidence 9998664321 1 1 12233321111 122345555555444331111 111123677888888 Q ss_pred HHHHHHHHHHHHHHHHHccCCcceeeeeCC-cCCHHHHHHHHHHHHHHhcC----------cccccccee-cc------- Q lcl|Aclame:pro 196 TIFSEDSSRNATAAMWKNAGRPNLVLRHEK-RLSPEAQQRLREQFDRAHAG----------SSNTGKTMV-VE------- 256 (518) Q Consensus 196 ~i~~~~~~~~~~~~~~~ng~~p~gil~~~~-~~~~e~~~~~~~~~~~~~~g----------~~n~g~~~v-l~------- 256 (518) .+....-++...--+==.-+.-+-|+.++- .+.+..+++..+.+-..|.. ..+..+.+- ++ T Consensus 257 p~NQLkm~EDAlVIYRitRAPeRRvFYIDvGnlPk~KAeqYl~~im~k~kNklvYDa~TGev~ddrk~msMlEDyWLpRR 336 (521) T protein:vir:65 257 PANQLKLLEDAMVVYRITRAPERRVFFIDTGNMNNRKAAQHMNSVAQSFKNRVVYDASTGKLKNQQANLSMTEDYWLQRR 336 (521) T ss_pred hHHhhHHHHhhHHHHhhhccccceEEEEecCCCCchhHHHHHHHHHHhcCceeEeecccccccccccccchhhhhccccc Confidence 877777777654433223333344555542 23333333333333333322 111112221 11 Q ss_pred ---CCcccccccCChhhHHHHHHHHHHHHHHHHHhccchHhhccccccccc--cHHHH---HHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 257 ---EGMEPIPLQLTAVEMQFIEARQLNREEVCGVYDIAPPIVHILDRATFS--NISAQ---MRAFYRDTMAIPIARIQSA 328 (518) Q Consensus 257 ---~g~~~~~~~~~~~d~q~~e~~~~~~~~Ia~~fgVpp~~lg~~~~~~~s--~~e~~---~~~~~~~~l~P~~~~ie~~ 328 (518) .|.+++.+... +.+.-++-.++..+.+.++++||.+-++..+.+.++ ...+- ...|.. -|.-+..++... T Consensus 337 eGgrgTEItTLpGg-qnlgem~DV~YF~kkLy~aLnVP~sRl~~e~~~~~~~gr~~EItRDEiKF~K-FI~rLR~rFs~l 414 (521) T protein:vir:65 337 DGKAITDVTTLPGA-SGMSDIDDIRYFNRKLYEALRVPLSRSNLSDANMVIGGDGSEITRDELEFSK-FIRTLQSQFSEV 414 (521) T ss_pred CCCCccceeecccC-CCcChHHHHHHHHHHHHHHhCCCceeccCCCCcceeccccchhhHHHHHHHH-HHHHHHHHHHHH Confidence 23444444321 223333445566788999999999998644332221 11111 112221 233333333333 Q ss_pred HH----hhh-----cchh--h---ccceeeechhh----hhccC-HHHHHHHHHHHHh--CCCcCHHHHHHH-HhCCCCC Q lcl|Aclame:pro 329 MD----KYV-----GQYW--V---RKNRMKFDIDD----VIQPD-WEAKSESTQKMVN--SGVATPNEGREI-MGLPRSD 386 (518) Q Consensus 329 ln----~~l-----~~~~--~---~~~~~~fd~~~----l~~~d-~~~~~~~~~~~~~--~g~~T~NE~R~~-~g~~pi~ 386 (518) +. ..| ++.. . ....+.|..+. +.... ...|+..+..+-. .-.++.+=+|+. |.+.--+ T Consensus 415 f~~~L~~qLilKgiit~eew~~i~~~I~~~f~~Dn~f~ElKe~Eil~~R~~~l~~~dpyvGky~S~dyi~k~ILr~tDee 494 (521) T protein:vir:65 415 LRDPLKYNLILKNVITEDDWDREINNIKVVFHRDSYYTEVKDAEILERRIGLIERITPYIGKYFSNQTVMRDILKYTDDQ 494 (521) T ss_pred HHHHHHHhhhhhcCCCHHHHHHHhhcceEEeeecchHHHHHHHHHHHHHHHHHHHhhhhhccccchHHHHHHHhccCHHH Confidence 33 322 2211 1 12233333222 11111 1223333332211 113344444432 3332110 Q ss_pred CccCceeeecccccccccccccCCCCCCCCCCCCcccCCCCCccCCc Q lcl|Aclame:pro 387 DPKADELYANSALQPLGATPDGAVEGEEAPAPKRPASTPVASLDQSP 433 (518) Q Consensus 387 ~~~gD~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 433 (518) -..-++ . +.. ....+--+ .+..+. ++- T Consensus 495 i~~~~k-----~---I~~-------E~~~~~~~----~p~~~~-~~f 521 (521) T protein:vir:65 495 MDTEKK-----Q---IEE-------EANDPRFK----QTPDEI-EDF 521 (521) T ss_pred HHHHHH-----H---HHH-------hhhCCCCC----CCcccc-cCC Confidence 000000 0 000 00000000 000000 001 No 252 >protein:vir:99672 Length: 532 # NCBI annotation: Head-to-tail joining protein # Family: family:all:481 # MgeID: mge:1523 # MgeName: VP4 # Cross-refs: genbank:acc:YP_249587;genbank:gi:68299738;genbank:GeneID:3799987 Probab=65.31 E-value=0.29 Score=23.57 Aligned_cols=381 Identities=10% Similarity=0.055 Sum_probs=131.1 Q ss_pred CCCCCCCCCccccccccchhhhhhhccCccCCcccCccchhhHHHHhhhHHHHHHHHHHHHhhc--cCceEEEEecCCce Q lcl|Aclame:pro 1 MLLANGQTLSAPAMAELSPQMQDSYYYAPAVGMQLERQFSLYGGIYKNQPWVRTVIAKRAQALA--RLPVKCMFTSGDTE 78 (518) Q Consensus 1 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~v~~ia~~ia--~lp~~v~~~~~~~~ 78 (518) ++|.+... .. .. ...+.+..+. .-++......|...+- +-||.=....+... T Consensus 42 ~~~~~~~~-~~-~~-------------------~~~~~~dst~-----~~a~~~LAa~L~~~ltpp~~~WF~l~~~d~~l 95 (532) T protein:vir:99 42 SVFPSATA-DG-ST-------------------SYTTPWQSIG-----ARGLNNLASKLMLALFPVGSSFFKLNVSELEV 95 (532) T ss_pred cccCCCCC-cc-hh-------------------hccccccchH-----HHHHHHHHHHHHHhhcCCCCccccccCCHHHH Confidence 33321110 00 00 0000111111 1244444444544443 35553222111100 Q ss_pred ee----------ecc------hHHHHHhhccCccCCHHHHHHHHHHHHHHcCCeeEEeeeCC--CCc--eeeeeeeCCcc Q lcl|Aclame:pro 79 TE----------EHD------TGYAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQKNK--SGT--PEKLMPMHPSR 138 (518) Q Consensus 79 ~~----------~~~------~~~~~l~~~PN~~~t~~~f~~~~~~~~ll~G~~~~~i~~~~--~G~--~~~l~~l~p~~ 138 (518) .+ ... ..++..+.+ -+++.=+..+..+++.+||+.+++..+. .++ ....||+ .+ T Consensus 96 ~~~~~~~~~~~~v~~~L~~ve~~~~~~~~~----snf~~~~~~~~~~L~~~G~a~l~~~~~~~~~~~~~~f~~~pl--~~ 169 (532) T protein:vir:99 96 KQSITSPEELTEIATGLAMVERICMNYMES----NSFRPTLHAAIKQLLVAGNVLLYIPSTEQVEGQSNAPKLYKL--HN 169 (532) T ss_pred hccCCChhhHHHHHHHHHHHHHHHHHHHHh----cCcHHHHHHHHHHHHhHCcEeEEecccccccCcccceEEEEc--Ce Confidence 00 000 111222222 2344445566778888999988765432 122 2333443 33 Q ss_pred eEEEeccCcceE-----------------------------------EEEeeccCCCC----------ceeE-------E Q lcl|Aclame:pro 139 VAIKRNSRTGRY-----------------------------------EYYFQAGAGVG----------TQLV-------S 166 (518) Q Consensus 139 v~~~~~~~~~~~-----------------------------------~~~~~~~~~~~----------~~~~-------~ 166 (518) +.+..+..|... .|.....+..+ +..+ . T Consensus 170 y~v~~d~~G~v~~ivrr~~~~~~~l~e~~~~~~~~~~~~~~p~~~v~v~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 249 (532) T protein:vir:99 170 FVVERDAYDNVLQIVTEDKIARAALPEDVRKSLEDAQGDQNPSEEVTIYTHVYRDPEAMVFRSYQEIDGEIVAGTEGEYP 249 (532) T ss_pred EEEeeCCCCCeeeEeeeeeecHHhcChHHHHHhhccccccCCCcceEEEEEEEecCCCCeeEEEEeecCceecccccccc Confidence 444444433221 11000000000 0000 0 Q ss_pred EeeeeeEEeecCCCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHccCCcceeeeeCCcCCHHHHHHHHHHHHHHhcCc Q lcl|Aclame:pro 167 FADDEVVPIRFFNPDGLERGLSLMESLKSTIFSEDSSRNATAAMWKNAGRPNLVLRHEKRLSPEAQQRLREQFDRAHAGS 246 (518) Q Consensus 167 ~~~~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~p~gil~~~~~~~~e~~~~~~~~~~~~~~g~ 246 (518) +.....+-.|....++..||.||.+-+...+.....+.+.......-...|...+.-+....+... ..+. T Consensus 250 ~~e~P~~~~Rw~~~~ge~YGrgp~~~~l~D~k~L~~l~~~~l~~~~~a~~~~~lv~p~g~~~~~~~----------~~~~ 319 (532) T protein:vir:99 250 LDSCPWIPVRLIKMPNEDYGRSFVEEYLGDLKSLENLYEAIVKMSMISSKVLFFVNPNGVTQIRRV----------AKAN 319 (532) T ss_pred cccCCceeeeeeecCCCccccchHHHHHHHHHHHHHHHHHHHHHHHHHcCCCceeccccccchhhh----------ccCC Confidence 111233444555556778999999999999999999998888887777777665543333332221 1111 Q ss_pred ccccccee--ccCCcccccccCChhhHH-HHHHHHHHHHHHHHHhccchHhhccccccccccHHH--HHHHHHHHHHHHH Q lcl|Aclame:pro 247 SNTGKTMV--VEEGMEPIPLQLTAVEMQ-FIEARQLNREEVCGVYDIAPPIVHILDRATFSNISA--QMRAFYRDTMAIP 321 (518) Q Consensus 247 ~n~g~~~v--l~~g~~~~~~~~~~~d~q-~~e~~~~~~~~Ia~~fgVpp~~lg~~~~~~~s~~e~--~~~~~~~~~l~P~ 321 (518) . | .++ ..+++...++... .+.+ ..+..+.....|-.+|-+.. +..-+. ..-+.++ ....-....|.|. T Consensus 320 ~--g-~~v~g~~~~i~~~~~~~~-~~~~~~~~~i~~~~~rI~~af~~~~--~~~~d~-~r~TAtEV~~r~~E~~~~LGpv 392 (532) T protein:vir:99 320 T--G-DFVAGRKQDVEVFQLEKY-NDFQVAKATADDIEKRLSYAFMLNS--AVQRGG-DRVTAEEIRYVAGELEDTLGGV 392 (532) T ss_pred C--c-ceecCCcccceeeecccc-cchhHHHHHHHHHHHHHHHHHhhhh--cccCCC-CcccHHHHHHHHHHHHHHhhHH Confidence 1 1 111 1223333333322 2333 24455566778888884442 111111 1112222 2223333445555 Q ss_pred HHHHHHHHH------------hh-hcchhhccceeeechhhhhccCHHHHHHHHHHHHhC-----C-------CcCHHH- Q lcl|Aclame:pro 322 IARIQSAMD------------KY-VGQYWVRKNRMKFDIDDVIQPDWEAKSESTQKMVNS-----G-------VATPNE- 375 (518) Q Consensus 322 ~~~ie~~ln------------~~-l~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~-----g-------~~T~NE- 375 (518) +.++.++|= +. +++...... ...+. +...+.-.+++.+..+.+. . .+..++ T Consensus 393 ~~rl~~E~l~Pli~r~~~il~r~g~lP~~p~~~-~~~~i--v~~is~Laraq~~~~l~~~~~~laq~~p~~~d~id~d~~ 469 (532) T protein:vir:99 393 YSLLSQELQLPLVKILLKELQATSKIPNLPKEA-VEPAI--ATGLEALGRGHDLNKLNVFIDYMIKLAGLQDDDINLLDV 469 (532) T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCCCCChhh-cccce--eecchHHHHHHHHHHHHHHHHHHHhhcchhhhhCCHHHH Confidence 555544433 22 333221111 01110 1111222222222221110 0 111111 Q ss_pred ---HHHHHhCCCCCCccCceeeecccccccccccccCC-CCCCCCCCCCcccCCCCCccCCccccccccChhhh-cchhH Q lcl|Aclame:pro 376 ---GREIMGLPRSDDPKADELYANSALQPLGATPDGAV-EGEEAPAPKRPASTPVASLDQSPPASVPGLSPTNS-DRSTD 450 (518) Q Consensus 376 ---~R~~~g~~pi~~~~gD~~~~~~n~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 450 (518) +.+.+|.+|. +++.......... ..+.+..+ ...... +.... T Consensus 470 ~~~~a~~~GV~~~------------~i~r~~ee~~~~~~q~~~~~~~---------------------~~a~~~~~~~~~ 516 (532) T protein:vir:99 470 KMRLANSLGMDTT------------GLILTQQDKQAKMAEASTAAGM---------------------VTAGQQMGAAGG 516 (532) T ss_pred HHHHHHHhCCChh------------hccCCHHHHHHHHHHHHHHHHH---------------------HHHHHHHHHHHH Confidence 1122222211 1110000000000 00000000 000000 00000 Q ss_pred HHHHHHHHHhhccCcch Q lcl|Aclame:pro 451 SGKTEPRRLMQKPPPKE 467 (518) Q Consensus 451 ~~~~~~~~~~~k~~~~~ 467 (518) .+..+.+.. .-.-+.+ T Consensus 517 ~~~~~~~~~-~~~~~~~ 532 (532) T protein:vir:99 517 QAAAAMMQQ-QAGMPTQ 532 (532) T ss_pred HhcchhHHh-hcCCCCC Confidence 000000000 0000000 No 253 >protein:vir:6896 Length: 523 # NCBI annotation: gp20 portal vertex protein of head # Family: family:all:1036 # MgeID: mge:140 # MgeName: RB69 # Cross-refs: genbank:acc:NP_861872;genbank:gi:32453663;genbank:GeneID:1494298 Probab=54.17 E-value=0.51 Score=22.19 Aligned_cols=407 Identities=8% Similarity=0.020 Sum_probs=158.0 Q ss_pred CCCCCCCC----------------Cccccccccchhhh-hhhccC-ccC--------Cc-----ccCccchhhHHHHhhh Q lcl|Aclame:pro 1 MLLANGQT----------------LSAPAMAELSPQMQ-DSYYYA-PAV--------GM-----QLERQFSLYGGIYKNQ 49 (518) Q Consensus 1 ~~f~~~~~----------------~~~~~~~~~~~~~~-~~~~~~-~~~--------~~-----~~~~~~~~~~~~~~~~ 49 (518) -|||.... ..+|.....+..+. ..+.+. ... +. ........|+++ +.+ T Consensus 7 ~lf~f~~~~de~~~~~~~~~~~~S~~~p~~dDGa~~i~~~~~~~~~~~~~~~q~~y~~~e~~~~~~~eLI~~YR~m-a~~ 85 (523) T protein:vir:68 7 SLFAPWAKMDERDYKDQEKENLESITSPKLDDGAKEYEVSENEAQQTYNAMFQRMFGSQEPGLKSTRELIDTYRNL-MTN 85 (523) T ss_pred hhhhhhhhhhhhhhhhhhhccCCCccccCCCCcceeeeccccccccccchhhhhhhhccccccchHHHHHHHHHHH-hhc Confidence 23443211 11111111100111 111110 000 00 011112334554 688 Q ss_pred HHHHHHHHHHHHhhccC-----ceEEEEecCCceee---ecchHHHHHhhccCccCCHHHHHHHHHHHHHHcCCeeEEee Q lcl|Aclame:pro 50 PWVRTVIAKRAQALARL-----PVKCMFTSGDTETE---EHDTGYAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQ 121 (518) Q Consensus 50 ~~v~~~v~~ia~~ia~l-----p~~v~~~~~~~~~~---~~~~~~~~l~~~PN~~~t~~~f~~~~~~~~ll~G~~~~~i~ 121 (518) |-|..||+-|.+.+.-. |..|--.+-+-... .....+..++.--+-...++++ ++.+++.|..|..++ T Consensus 86 pEvd~Av~eIVneaiv~d~~~~pV~i~Ld~~~~s~~iK~kI~eeF~~Il~ll~F~~~~~~~----fR~WYVDgRi~fhKi 161 (523) T protein:vir:68 86 YEVDNAVSEIVSDAIVYEDDTEVVSINLDNTKFSPNIKSMMLDEFNEVLNHLSFQRKGSDH----FRRWYVDSRIFFHKI 161 (523) T ss_pred cchhhHHHHhhcceeeecCCCceEEEEecccccchHHHHHHHHHHHHHHHHhccchhhhHH----HHhheeeeEEEEEEE Confidence 99999999999887532 33332221110111 1111222333333344455554 455678999999887 Q ss_pred eCCC---CceeeeeeeCCcceEEEec----cCcc-------eEEEEeeccCC---------CCceeEEEeeeeeEEeecC Q lcl|Aclame:pro 122 KNKS---GTPEKLMPMHPSRVAIKRN----SRTG-------RYEYYFQAGAG---------VGTQLVSFADDEVVPIRFF 178 (518) Q Consensus 122 ~~~~---G~~~~l~~l~p~~v~~~~~----~~~~-------~~~~~~~~~~~---------~~~~~~~~~~~~vih~~~~ 178 (518) -+.+ ..+.+|..|+|..|+.++. ..++ ..+|.|..... ..+..++++.+-|.|.... T Consensus 162 id~k~pk~GI~Elr~lDPr~i~~vr~i~~~~~~g~~vi~~~~e~f~Y~~~~~~~~~~g~~~~~~~~ikI~~dAI~y~hSG 241 (523) T protein:vir:68 162 IDPKRPKEGIKELRRLDPRQVQYVREVITTTEAGVKIVKGYKEYFIYDTSHESYACDGRIYEAGTKIKIPKAAIVYAHSG 241 (523) T ss_pred eeCCCccccceeeeeeCCcceeEEEeecCCCCcchhhhhhhhhheeeccccccccccccccCCCcceecchhheeeeecc Confidence 6633 3589999999999976322 1111 12222321111 1234566766666554422 Q ss_pred CCC-cccccchHHHHHHHHHHHHHHHHHHHHHHHHccCCcceeeeeCC-cCCHHHHHHHHHHHHHHhcC----------c Q lcl|Aclame:pro 179 NPD-GLERGLSLMESLKSTIFSEDSSRNATAAMWKNAGRPNLVLRHEK-RLSPEAQQRLREQFDRAHAG----------S 246 (518) Q Consensus 179 ~~~-~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~p~gil~~~~-~~~~e~~~~~~~~~~~~~~g----------~ 246 (518) -.+ +...=+|-|..|...+....-++...--+==.-+.-+-|+.++- .+.+..+++..+.+-..+.. . T Consensus 242 L~d~~~~~i~gyLhkAiKp~NQLkmlEDAlVIYRitRAPeRRvFYIDvGnlPk~KAeqYl~~im~k~kNKlvYDa~TGev 321 (523) T protein:vir:68 242 LVDCCGKNIIGYLHRAIKPANQLKLLEDAVVIYRITRAPDRRVWYVDTGNMPSRKAAEHMQHVMNTMKNRIAYDATTGKI 321 (523) T ss_pred ceeCCCCceeccchhhhHHHHhhHHHHhhHHHHhhhccccceEEEEecCCCCchhHHHHHHHHHHhhcceeEEeccCCee Confidence 111 11123677888888777777776654433223333344554442 23333333333333222211 1 Q ss_pred ccccccee-c-----c-----CCcccccccCChhhHHHHHHHHHHHHHHHHHhccchHhhccc-cccccccHHHHHH--H Q lcl|Aclame:pro 247 SNTGKTMV-V-----E-----EGMEPIPLQLTAVEMQFIEARQLNREEVCGVYDIAPPIVHIL-DRATFSNISAQMR--A 312 (518) Q Consensus 247 ~n~g~~~v-l-----~-----~g~~~~~~~~~~~d~q~~e~~~~~~~~Ia~~fgVpp~~lg~~-~~~~~s~~e~~~~--~ 312 (518) .+..+.+- + + .|.+++.+... +.+.-++-.++..+.+.++++||.+-+... +.-+.+-..+-.+ . T Consensus 322 ~ddrk~msMlEDyWLpRReGgrgTEItTLpGg-qnlgem~DV~YF~kkLy~aLnVP~sRl~~~~~~f~~Gr~~EItRDEi 400 (523) T protein:vir:68 322 KNQQHIMSMTEDYWLQRRDGKAVTEVDTLPGA-DNTGNMEDVRWFRNALYMALRIPITRIPSDQGGIQFDAGTSITRDEL 400 (523) T ss_pred ccchhhhhhHhhhcccccCCCcccceeecccc-CCcChHHHHHHHHHHHHHHhCCcceeecCCCcceecccccchhHHHH Confidence 11111111 1 1 23444444322 223333445566788999999999888432 1122111111111 1 Q ss_pred HHHHHHHHHHHHHHHHHHhhh---------cch--hh---ccceeeechhhh----hccC-HHHHHHHHHHHHh--CCCc Q lcl|Aclame:pro 313 FYRDTMAIPIARIQSAMDKYV---------GQY--WV---RKNRMKFDIDDV----IQPD-WEAKSESTQKMVN--SGVA 371 (518) Q Consensus 313 ~~~~~l~P~~~~ie~~ln~~l---------~~~--~~---~~~~~~fd~~~l----~~~d-~~~~~~~~~~~~~--~g~~ 371 (518) -...-|.-+..++...+...| ++. +. ....+.|..+.. .... ...|...+..+-. .-.+ T Consensus 401 kF~KFI~rLR~rFs~lf~~~Lk~qLilKgiit~eew~~i~~~I~~~f~~Dn~f~ElKe~Eil~~R~~~l~~~dpyvGky~ 480 (523) T protein:vir:68 401 SFGKFIRELQHKFEEIFLDPLKTNLILKGIITEDEWNDEINNIKIKFHRDSYFSELKDAEILERRINMLQMAEPFIGKYI 480 (523) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCHHHHHHHhhcceEeeeecchHHHHHHHHHHHHHHHHHHHhhhhhcccc Confidence 111223333344443333322 121 11 122333332221 1111 1223333332211 1133 Q ss_pred CHHHHHHH-HhCCCCCCccCceeeecccccccccccccCCCCCCCCCCCCcccCCCCCccCCc Q lcl|Aclame:pro 372 TPNEGREI-MGLPRSDDPKADELYANSALQPLGATPDGAVEGEEAPAPKRPASTPVASLDQSP 433 (518) Q Consensus 372 T~NE~R~~-~g~~pi~~~~gD~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 433 (518) +.+=+|+. |.+.--+-..-++ . +. ..... +.-.+...+.++- T Consensus 481 s~~yi~k~ILr~tDeei~~~~k-----q---I~-------~E~k~-----~~~~~p~~e~~~f 523 (523) T protein:vir:68 481 SHRTAMKDILQMSDEEIEQEAK-----Q---IE-------EESKE-----ARFQDPDQEQEDF 523 (523) T ss_pred hhHHHHHHHhccCHHHHHHHHH-----H---HH-------HHhhc-----CCCCCCchhhhcC Confidence 44444432 3332110000000 0 00 00000 0000000011111 No 254 >protein:vir:5665 Length: 511 # NCBI annotation: portal vertex protein of head # Family: family:all:1036 # MgeID: mge:119 # MgeName: KVP40 # Cross-refs: genbank:acc:NP_899604;genbank:gi:34419591;genbank:GeneID:2546036 Probab=52.56 E-value=0.55 Score=22.00 Aligned_cols=403 Identities=10% Similarity=0.076 Sum_probs=163.3 Q ss_pred CCC-------------CCCC-CCccccccccchhh---------hhhhccC--ccCC-cccCccchhhHHHHhhhHHHHH Q lcl|Aclame:pro 1 MLL-------------ANGQ-TLSAPAMAELSPQM---------QDSYYYA--PAVG-MQLERQFSLYGGIYKNQPWVRT 54 (518) Q Consensus 1 ~~f-------------~~~~-~~~~~~~~~~~~~~---------~~~~~~~--~~~~-~~~~~~~~~~~~~~~~~~~v~~ 54 (518) +=| ..+. +...|.......-+ ...+.+. ...| .+.......|+++ +.+|-|.. T Consensus 1 ~~~w~~~de~~~~~~~~~~~~S~~~p~~~DGa~~i~~~~~~~~~~g~~~~~~~~~~~~~~~~eLI~~YR~m-a~~pEvd~ 79 (511) T protein:vir:56 1 MKFWTKEEEQDIQKIEKNPVRSFSAPDNVDGAKEIHTNLLAPQLGHAIIPSDAQSEGTIPVKELIKSYRAL-AEYHEVDD 79 (511) T ss_pred CCCccchhhhhhhhhccCCcccccCCCCCCCceEEecccccceecceeccccccccCccchHHHHHHHHHH-hhccchhh Confidence 111 1111 11111100000000 0000000 0000 0111122234433 47899999 Q ss_pred HHHHHHHhhcc-----CceEEEEecCCceee---ecchHHHHHhhccCccCCHHHHHHHHHHHHHHcCCeeEEeeeCCCC Q lcl|Aclame:pro 55 VIAKRAQALAR-----LPVKCMFTSGDTETE---EHDTGYAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQKNKSG 126 (518) Q Consensus 55 ~v~~ia~~ia~-----lp~~v~~~~~~~~~~---~~~~~~~~l~~~PN~~~t~~~f~~~~~~~~ll~G~~~~~i~~~~~G 126 (518) ||+-|.+.+.- -|..|--.+-+-... .....+..++.--+-...++++ ++.+++.|..|..++-+.+. T Consensus 80 Av~eIvne~iv~d~~~~pV~l~ld~~~~s~~iK~kI~eeF~~Il~ll~F~~~~~~~----fR~WYVDgRi~fHkiid~k~ 155 (511) T protein:vir:56 80 AIQEIVDEAIVYENDKEVVWLNLDNTDFSENIKAKINEEFDRVVSLLQMRKHGYKW----FRKWYVDSRIYFHKILDKDN 155 (511) T ss_pred HHHHhhcceeEecCCCceEEEEecccCcchHHHHHHHHHHHHHHHHhccchhhhHH----HhhhhhcceEEEEEEecccc Confidence 99999988753 233333222111111 1111222233333334445554 45567899999999888776 Q ss_pred ceeeeeeeCCcceEEEecc-----C------cceEEEEeeccCCC----------CceeEEEeeeeeEEeecCCC---Cc Q lcl|Aclame:pro 127 TPEKLMPMHPSRVAIKRNS-----R------TGRYEYYFQAGAGV----------GTQLVSFADDEVVPIRFFNP---DG 182 (518) Q Consensus 127 ~~~~l~~l~p~~v~~~~~~-----~------~~~~~~~~~~~~~~----------~~~~~~~~~~~vih~~~~~~---~~ 182 (518) .+.+|..|+|..++.++.- + +...+|.|...+.. ....++++.+.|.|....-. .+ T Consensus 156 GI~eLr~lDPr~i~~vr~i~~~~~~~~~v~~~~~ey~~Y~~~~~~~~~~~~~~~~~~~~vkI~~daI~y~hSGL~d~~~~ 235 (511) T protein:vir:56 156 NIIELRPLNPMKMELVREIQKETIDGVEVVKGTLEYYVYKQSDYKMPSWMSATNRAQTSFRIPKDAIVFAHSGLMRGCAD 235 (511) T ss_pred ceeehhhcCcccchhhhhhhcccccccccccceeeeeEecCCCcccCcccccccccccceeechhheeeecccceeccCC Confidence 7999999999998865431 1 12223334322111 12347788888866553321 22 Q ss_pred ccccchHHHHHHHHHHHHHHHHHHHHHHHHccCCcceeeeeCC-cCCHHHHHHHHHHHHHHhcC----------cccccc Q lcl|Aclame:pro 183 LERGLSLMESLKSTIFSEDSSRNATAAMWKNAGRPNLVLRHEK-RLSPEAQQRLREQFDRAHAG----------SSNTGK 251 (518) Q Consensus 183 ~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~p~gil~~~~-~~~~e~~~~~~~~~~~~~~g----------~~n~g~ 251 (518) ..+.+|-+..|...+....-++....-+==.-+.-+-|+.++- .+.+..+++..+.+-..+.. ..+..+ T Consensus 236 ~g~i~syLhkAiKp~NQLkm~EDAlVIYRitRAPeRRvFYIDVGnLPk~KAeqYl~~iM~k~kNklVYDa~TGev~ddrk 315 (511) T protein:vir:56 236 DPYIIGYLDRAIKPANQLKMLEDALVIYRLARAPERRVFYVDVGNLPTQKAQQYVNGIMQNVKNRVVYDTQTGQVKNTTN 315 (511) T ss_pred CCeeeccchhhhHHHHhhHHHHhhHHHHhhhccccceEEEEecCCCCchhHHHHHHHHHHhcCceEEEeccCceeccchh Confidence 3357889999998888877777765444333333344554442 23322233333333222211 111111 Q ss_pred cee-c-----c-----CCcccccccCChhhHHHHHHHHHHHHHHHHHhccchHhhccccc-cccc--cHHHHH---HHHH Q lcl|Aclame:pro 252 TMV-V-----E-----EGMEPIPLQLTAVEMQFIEARQLNREEVCGVYDIAPPIVHILDR-ATFS--NISAQM---RAFY 314 (518) Q Consensus 252 ~~v-l-----~-----~g~~~~~~~~~~~d~q~~e~~~~~~~~Ia~~fgVpp~~lg~~~~-~~~s--~~e~~~---~~~~ 314 (518) .+- + + .|.+++.+... +.+.-++-.++..+.+.++++||.+-++..+. +.++ ...+-. ..|. T Consensus 316 ~msMlEDyWLpRReGgrgTEItTLpGg-qnlgem~DV~YF~kKLy~aLnVP~SRl~~e~q~~~f~~Gr~~EItRDEiKF~ 394 (511) T protein:vir:56 316 AMSMLEDYYLPRREGSKGTEVSTLPGG-QSLGDIEDVLYFNRKLYKAMRIPTSRAASEDQTGGINFGQGAEITRDELKFT 394 (511) T ss_pred hhhhHhhhcccccCCCCccceeecccc-CCcChHHHHHHHHHHHHHHhCCCcccccCCCCccccccccchhhhHHHHHHH Confidence 111 1 1 23444444322 22333344556678899999999999873321 1221 111111 1222 Q ss_pred HHHHHHHHHHHHHHHHh----hh-----cch--hh---ccceeeechhhh----hccC-HHHHHHHHHHHHh--CCCcCH Q lcl|Aclame:pro 315 RDTMAIPIARIQSAMDK----YV-----GQY--WV---RKNRMKFDIDDV----IQPD-WEAKSESTQKMVN--SGVATP 373 (518) Q Consensus 315 ~~~l~P~~~~ie~~ln~----~l-----~~~--~~---~~~~~~fd~~~l----~~~d-~~~~~~~~~~~~~--~g~~T~ 373 (518) .-|.-+..++...+.. .| ++. +. ....+.|..+.. .... +..|+.++..+-. .-.++. T Consensus 395 -KFI~RLR~rFs~lF~~~Lk~qLilKgiit~eeW~~i~~~I~~~f~~Dn~f~ElKe~Eil~~Rl~~l~~~dpyvGky~S~ 473 (511) T protein:vir:56 395 -KFVKRLQTKFETVITDPLKHQLIVNNIITEEEWDANHEKLYVVFNQDSYFEEAKELEILNSRMNAMRDIQDYAGKYYSH 473 (511) T ss_pred -HHHHHHHHHHHHHHHHHHHHhhhhccCCCHHHHHHHhhcceEEeeecchHHHHHHHHHHHHHHHHHHHhcchhccccch Confidence 2233333444433333 22 121 11 122333332221 1111 1222333332211 113344 Q ss_pred HHHHHH-HhCCCCCCccCceeeecccccccccccccCCCCCCCCCCCCcccCCC Q lcl|Aclame:pro 374 NEGREI-MGLPRSDDPKADELYANSALQPLGATPDGAVEGEEAPAPKRPASTPV 426 (518) Q Consensus 374 NE~R~~-~g~~pi~~~~gD~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 426 (518) +=+|+. |.+.--+-..-++ . +.. ....+- -+..+.+- T Consensus 474 ~yi~k~ILr~tDeei~~~~k-----~---I~~-------E~k~~~-~~~~e~~f 511 (511) T protein:vir:56 474 KYIQKNILRLSDDQITAMQS-----E---IDE-------EETNPR-FQQDDQGF 511 (511) T ss_pred HHHHHHHhccCHHHHHHHHH-----H---HHH-------hhcCCC-CCCcccCC Confidence 444432 3332110000000 0 000 000000 00000000 No 255 >protein:vir:100039 Length: 522 # NCBI annotation: T7-like head-to-tail connector # Family: family:all:481 # MgeID: mge:1604 # MgeName: P-SSP7 # Cross-refs: genbank:acc:YP_214201;genbank:gi:61806424;genbank:GeneID:3294719 Probab=38.40 E-value=1.1 Score=20.43 Aligned_cols=408 Identities=13% Similarity=0.086 Sum_probs=130.3 Q ss_pred CCCCCCCCCcc--cccc-ccchhhhhhhccCccCCcccCccchhhHHHHhhhHHHHHHHHHHHHhhc--cCceEEEEecC Q lcl|Aclame:pro 1 MLLANGQTLSA--PAMA-ELSPQMQDSYYYAPAVGMQLERQFSLYGGIYKNQPWVRTVIAKRAQALA--RLPVKCMFTSG 75 (518) Q Consensus 1 ~~f~~~~~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~v~~ia~~ia--~lp~~v~~~~~ 75 (518) .|..+...-.. ...+ .+.|......+.....+......+..+. .-++......+...+- +-||.=....+ T Consensus 9 ~L~~~R~~~e~~w~e~~~~tlP~~~~~~~~~~~~~~~~~~~~dstg-----~~a~~~LAa~l~~~ltpp~~~WF~l~~~d 83 (522) T protein:vir:10 9 QLTTARQMFLDKAVECSELTLPYLIDDDISSRPNHKSLTVPWQSVG-----AKCCVTLAAKLMLAVLPPQTSFFKLQVRD 83 (522) T ss_pred HHHHHhhHHHHHHHHHHHHhhhcccCCCCCCCcccccccccccchH-----HHHHHHHHHHHHHhhcCCCCccccccCCh Confidence 11111100000 0000 0000000000000000000011111111 1133444444444442 34453222111 Q ss_pred Cc-eeeec-------c-------hHHHHHhhccCccCCHHHHHHHHHHHHHHcCCeeEEeeeCCCCceeeeeeeCCcceE Q lcl|Aclame:pro 76 DT-ETEEH-------D-------TGYAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQKNKSGTPEKLMPMHPSRVA 140 (518) Q Consensus 76 ~~-~~~~~-------~-------~~~~~l~~~PN~~~t~~~f~~~~~~~~ll~G~~~~~i~~~~~G~~~~l~~l~p~~v~ 140 (518) .. ..... + +.++..+.+ -+++.=+..+..+++.+||+.+++..+ + ...+|+ .++. T Consensus 84 ~~l~~~~~~~~~~~v~~~l~~ve~~~~~~l~~----snf~~~~~~~~~~L~~~G~a~ly~~~~--~--~~~~pl--~~y~ 153 (522) T protein:vir:10 84 DKLGEELDPQIRSELDLSFSKMERMIMDYIAA----SNDRVAVHQALKHLIVGGNALIFMGKD--G--LKTFPL--TRYV 153 (522) T ss_pred HHHhhhcChhhHHHHHHHHHHHHHHHHHHHHh----cCcHHHHHHHHHHHHhHCceeEEEcCC--C--ceEEEc--ceEE Confidence 10 00000 0 111222222 234444556677888999998775432 1 223343 2333 Q ss_pred EEeccCcceE-------------------------------------EEEeeccCCCCceeE-----------------E Q lcl|Aclame:pro 141 IKRNSRTGRY-------------------------------------EYYFQAGAGVGTQLV-----------------S 166 (518) Q Consensus 141 ~~~~~~~~~~-------------------------------------~~~~~~~~~~~~~~~-----------------~ 166 (518) +..|..|... .|.........+... . T Consensus 154 v~~d~~G~vd~i~r~~~~t~~ql~~~fg~~~~~~~~~~~~~~~~~v~v~~~v~p~~~~~~~~~~~~~~~~~~~~~~s~~g 233 (522) T protein:vir:10 154 INRDGDGNVLEIVTKELISRKVLDIELPEPKPNTGIDESSTTNDDVTIYTYVKLDKSSGRWVWHQEAFDKIIPDSRSTAP 233 (522) T ss_pred EeeCCCCCeeEEEeeeeccHHHHHHhcchhccchhhhcccCCCCceEEEEEEEeeccCCceEEEEccCCccccccccccc Confidence 3344333221 111000000000000 1 Q ss_pred EeeeeeEEeecCCCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHccCCcceeeeeCCcCCHHHHHHHHHHHHHHhcCc Q lcl|Aclame:pro 167 FADDEVVPIRFFNPDGLERGLSLMESLKSTIFSEDSSRNATAAMWKNAGRPNLVLRHEKRLSPEAQQRLREQFDRAHAGS 246 (518) Q Consensus 167 ~~~~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~p~gil~~~~~~~~e~~~~~~~~~~~~~~g~ 246 (518) |.....+-.|....+|..||.||.+-+...+.....+.+...........|..++.-.....+... ..|. T Consensus 234 ~~~~P~~~~Rw~~~~ge~YGrgp~~~~l~D~k~L~~l~~~~~~~~~~a~~p~~lv~~~~~~~~~~l----------~~~~ 303 (522) T protein:vir:10 234 KNASPWLPLRFNTVDGEDYGRGRVEEFLGDLKSLDGLSQSLIEGAAAASKVVFLVSPSSTTKPATI----------AKAG 303 (522) T ss_pred cccCCceeeeeeecCCCccccchHHHHHHHHHHHHHHHHHHHHHHHHhcCCceeeccccccccccc----------cCCC Confidence 111123334544456778999999999999999999999999888888888766543333222211 1121 Q ss_pred cccccceecc--CCcccccccCChhhHH-HHHHHHHHHHHHHHHhccchHhhccccccccccHHH--HHHH--------- Q lcl|Aclame:pro 247 SNTGKTMVVE--EGMEPIPLQLTAVEMQ-FIEARQLNREEVCGVYDIAPPIVHILDRATFSNISA--QMRA--------- 312 (518) Q Consensus 247 ~n~g~~~vl~--~g~~~~~~~~~~~d~q-~~e~~~~~~~~Ia~~fgVpp~~lg~~~~~~~s~~e~--~~~~--------- 312 (518) . +.++.. +++...++.. ..+.+ ..+..+.....|..+|- ++...++..-+.++ .... T Consensus 304 ~---~~~v~g~~~~v~~~~~~~-~~d~~~~~~~i~~~~~ri~~aFl-----~~~~~d~~rvTAtEV~~r~~E~~~~LGpv 374 (522) T protein:vir:10 304 N---GAIVQGRPEDVAVIQVGK-TADFSTAANMATAIEKRLLEAFL-----VMNVRNAERVTAEEVRLTQLELEQQLGGI 374 (522) T ss_pred C---cceecCCCccceeecccc-cccchHHHHHHHHHHHHHHHHHh-----hccCCCCCCCCHHHHHHHHHHHHHHhhHH Confidence 1 122222 2333333332 23444 23445556677777773 22121221112222 1222 Q ss_pred ---HHHHHHHHHHHHHHHHHHhh-hcchhhccceeeechhhhhccCHHHHHHHHHHHHhC-----CCcCHHHHHHHHhCC Q lcl|Aclame:pro 313 ---FYRDTMAIPIARIQSAMDKY-VGQYWVRKNRMKFDIDDVIQPDWEAKSESTQKMVNS-----GVATPNEGREIMGLP 383 (518) Q Consensus 313 ---~~~~~l~P~~~~ie~~ln~~-l~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~-----g~~T~NE~R~~~g~~ 383 (518) +...-+.|++.+.-..+.+. +++....... + ...+...+.-.+++.+..+... .++-+..+...++.+ T Consensus 375 ~~rl~~E~l~Pli~r~~~il~r~g~lP~~p~~~~-~--~~~v~~is~Laraq~~~~l~~~~~~i~~~~~p~~~~~~id~d 451 (522) T protein:vir:10 375 FSLLVIEFLIPYLNRTLLVLQRSNQIPKLPKDIV-R--PTIVAGVNALGRGQDRESLTAFVGTIAQTLGPEALMQYLNPL 451 (522) T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcccc-c--cccccchhHHHHHHHHHHHHHHHHHHHHhhCchhhhhcCCHH Confidence 33444455554444444333 3433222110 1 0111122222222222221110 000011111111111 Q ss_pred CCCCccCceeeec-cccccccc-------ccccCC-CCCCCCCCCCcccCCCCCccCCccccccccChhhhcchhHHHHH Q lcl|Aclame:pro 384 RSDDPKADELYAN-SALQPLGA-------TPDGAV-EGEEAPAPKRPASTPVASLDQSPPASVPGLSPTNSDRSTDSGKT 454 (518) Q Consensus 384 pi~~~~gD~~~~~-~n~~~~~~-------~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 454 (518) .+-+.-++.+-+| .+++.-.. ...... .....+..++-+..+..+..+.+ +...+.++ T Consensus 452 ~~~~~~a~~~Gvp~~~ivrt~eev~~~~q~~q~~~~~~~~~~~a~~~~~~~~~~~~~~~-~~~~~~~~------------ 518 (522) T protein:vir:10 452 EAIKRLAAAQGIDVLNLVKTEQQLAEEQQAAQQQAAQQSLVDQAGQMTGSPLMDPTKNP-QLMDEEQP------------ 518 (522) T ss_pred HHHHHHHHHhCCChhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCccccH-HHHHHhCC------------ Confidence 1000000111111 11110000 000000 00000000000000000000000 00000000 Q ss_pred HHHHHhhccCcch Q lcl|Aclame:pro 455 EPRRLMQKPPPKE 467 (518) Q Consensus 455 ~~~~~~~k~~~~~ 467 (518) .++| T Consensus 519 ---------~~~~ 522 (522) T protein:vir:10 519 ---------PMEE 522 (522) T ss_pred ---------CCCC Confidence 0111 No 256 >protein:vir:97376 Length: 320 # NCBI annotation: putative portal protein # Family: family:all:11744 # MgeID: mge:1675 # MgeName: Q54 # Cross-refs: genbank:acc:YP_762589;genbank:gi:115304290;genbank:GeneID:5130579 Probab=36.74 E-value=1.2 Score=20.24 Aligned_cols=310 Identities=11% Similarity=0.050 Sum_probs=131.8 Q ss_pred CCCCC-CCCCccccccccchhhhhh--hccCccCCcccCccchhhHHHHhhhHHHHHHHHHHHHhhccCceEEEEecCCc Q lcl|Aclame:pro 1 MLLAN-GQTLSAPAMAELSPQMQDS--YYYAPAVGMQLERQFSLYGGIYKNQPWVRTVIAKRAQALARLPVKCMFTSGDT 77 (518) Q Consensus 1 ~~f~~-~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~v~~ia~~ia~lp~~v~~~~~~~ 77 (518) -+|.- +.+.-.|...+ ..+... -..++..| ..++.+. |.+. .-||..+.. |+... T Consensus 2 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~---~~~~~~~------~~~~----~~~~~~~~~-----~~~~~-- 59 (320) T protein:vir:97 2 GIFNFKKRETLTPELKE--SIIRQVTIEDESPFTG---TTDFNVR------NEVA----ESIATYLGA-----YKTSA-- 59 (320) T ss_pred CccccccccccChhHHh--hhhheeeeccCCCccc---ccccchh------hHHH----HHHHHHhhh-----hcccc-- Confidence 34433 33333332111 011100 01111111 1122221 1111 122222211 11111 Q ss_pred eeeecchHHHHHhhccCccCCHHHHHHHHHHHHHHcCCeeEEeeeCCCCceeeeeeeCCcceEEEeccCcceEEEEeecc Q lcl|Aclame:pro 78 ETEEHDTGYAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQKNKSGTPEKLMPMHPSRVAIKRNSRTGRYEYYFQAG 157 (518) Q Consensus 78 ~~~~~~~~~~~l~~~PN~~~t~~~f~~~~~~~~ll~G~~~~~i~~~~~G~~~~l~~l~p~~v~~~~~~~~~~~~~~~~~~ 157 (518) ..+.+| .+...|++.++.|.+..-..|+++-.. -|.++ .+++++.- -..++.+... + T Consensus 60 ------~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~------~~~~~~~~--~~~~~~~~~~-D 116 (320) T protein:vir:97 60 ------KRLSLL-------TNNPSFLRRLVKHALHNKTTYVYKSPT-YGWLI------TDSMTIEG--LRARLTFTLP-D 116 (320) T ss_pred ------ceeeee-------eCCHHHHHHHHHHhhcccceEEeeCCc-cceee------ecceeeee--eeeeEEEecC-c Confidence 011112 223468899999999888888775332 23221 22333221 0111111111 0 Q ss_pred CCCCceeEEEeeeeeEEeecCCCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHccCCcceeeeeCCcCC-HHHHHHHH Q lcl|Aclame:pro 158 AGVGTQLVSFADDEVVPIRFFNPDGLERGLSLMESLKSTIFSEDSSRNATAAMWKNAGRPNLVLRHEKRLS-PEAQQRLR 236 (518) Q Consensus 158 ~~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~p~gil~~~~~~~-~e~~~~~~ 236 (518) ....-.+++++-.|+ --.+++.+|..+-+... -. ..+.....+-+.|.+....+++.+.+.. ++-.++.. T Consensus 117 ~FN~~V~mtvpfyD~-----~ILdnpl~gv~tqe~gk-M~---g~a~~~v~kkL~~~~~IKafi~Tdid~GLee~kD~~~ 187 (320) T protein:vir:97 117 PFNSAVTMTVPFYDV-----GIIDSPLVEVDTEEANK-ML---EAAYSAVMKKLHNTGAIKAFISSDIDVGLEKMKEESD 187 (320) T ss_pred ccceeEEEEeeeech-----hhhhhhhcccChHHhhH-HH---HHHhhhhhhhccccceeEEEEecccchhHHHHHHHHH Confidence 000011111111111 11244567776653322 22 2233334556677788888888776532 33344444 Q ss_pred HHHHHHhcCccccccceeccCCcccccccCChhhHHHHHHHHHHHHHHHHHhccchHhhccccccccccHHHHHHHHHHH Q lcl|Aclame:pro 237 EQFDRAHAGSSNTGKTMVVEEGMEPIPLQLTAVEMQFIEARQLNREEVCGVYDIAPPIVHILDRATFSNISAQMRAFYRD 316 (518) Q Consensus 237 ~~~~~~~~g~~n~g~~~vl~~g~~~~~~~~~~~d~q~~e~~~~~~~~Ia~~fgVpp~~lg~~~~~~~s~~e~~~~~~~~~ 316 (518) ..+.++..-++.-.+.-++..|-+++++..+-.-+-- .-....+...+.-|+||..+|-.. ..+.+...|+.. T Consensus 188 ~kIk~mq~~A~~~nG~T~i~~~dDI~Qi~pDYS~sn~-~D~~l~~t~alS~y~m~~~IL~Gs------Ate~~~Iaf~~~ 260 (320) T protein:vir:97 188 SKIKAMLATAELLSGYTYIQRGDDVTQMMPDYTTSNV-TDFAAMRTFAASQLSVSDKILDGS------ATDGEKVAVMFR 260 (320) T ss_pred HHHHHHHHHHHHhcCcccccCCcceeeecccccccch-hHHHHHHHHHHhhcCCchhhcccc------CCcceeeehhhH Confidence 4444444333323345677777777776543221111 112334567788999999888432 236778899999 Q ss_pred HHHHHHHHH---HHHHHhhhcchhhccceeeechhhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHHhC--CCCCCccCc Q lcl|Aclame:pro 317 TMAIPIARI---QSAMDKYVGQYWVRKNRMKFDIDDVIQPDWEAKSESTQKMVNSGVATPNEGREIMGL--PRSDDPKAD 391 (518) Q Consensus 317 ~l~P~~~~i---e~~ln~~l~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~T~NE~R~~~g~--~pi~~~~gD 391 (518) .+.|+++++ |..|..++-.++ .+.|=.. .|-+.-|.+- -.|. .|-+..||| T Consensus 261 ~V~PLL~Q~~~~Ek~Lvy~m~~E~----FVs~mtT-------------------GG~l~S~~~~-~~~~~~~~~~~~~~~ 316 (320) T protein:vir:97 261 FVEPILEQFREYEPSLIYAMRDEF----FVSFMTT-------------------GGMLNSNRVD-GWGKEKAPNESKGGD 316 (320) T ss_pred hHHHHHHHhhhcCcceeeeeccce----eeeeeec-------------------Cceeeccccc-ccccccCCccccCCc Confidence 999999997 555544443221 1212100 1111111111 0122 122223444 Q ss_pred eeee Q lcl|Aclame:pro 392 ELYA 395 (518) Q Consensus 392 ~~~~ 395 (518) .--+ T Consensus 317 ~~~~ 320 (320) T protein:vir:97 317 VGDV 320 (320) T ss_pred ccCC Confidence 3333 No 257 >protein:vir:96783 Length: 488 # NCBI annotation: putative structural protein # Family: family:all:584 # MgeID: mge:1629 # MgeName: phiHSIC # Cross-refs: genbank:acc:YP_224240;genbank:gi:62362375;genbank:GeneID:3345722 Probab=27.98 E-value=1.8 Score=19.20 Aligned_cols=376 Identities=9% Similarity=-0.021 Sum_probs=146.0 Q ss_pred CCCCCCCCCccccccccch-hhhhhhccCc---cCCc-------------ccCccchhhH-------H-----HHhhhHH Q lcl|Aclame:pro 1 MLLANGQTLSAPAMAELSP-QMQDSYYYAP---AVGM-------------QLERQFSLYG-------G-----IYKNQPW 51 (518) Q Consensus 1 ~~f~~~~~~~~~~~~~~~~-~~~~~~~~~~---~~~~-------------~~~~~~~~~~-------~-----~~~~~~~ 51 (518) |. .+.+-|.-....+ |-...-.+.. ..|. ..+.....+. + .+.-.++ T Consensus 14 m~----V~~~hp~y~a~~~~W~~~~d~g~~~~k~~g~~YLPk~~~~~~~~~~d~~y~~~~~~~~~~y~~~~~~rA~~~n~ 89 (488) T protein:vir:96 14 ML----TPIYHPDYLVNAPQWLRNLDCVMDNIKRKKQTYLPNLGAIPPEAKTDPKVTALAAKIEKDWEDLTWRLANYVNI 89 (488) T ss_pred ec----ccccCHHHHHHhhhhhHhhhhhhHHHHHhhhhcCCCCCCccccccCcchhhhhhccchhhhHhhhhhccccCch Confidence 22 1111111111000 0000000000 0000 0000000010 1 1111245 Q ss_pred HHHHHHHHHHhhccCceEEEEecCCceeeecchHHHHHhhccC-ccCCHHHHHHHHHHHHHHcCCeeEEeeeCCCCc--- Q lcl|Aclame:pro 52 VRTVIAKRAQALARLPVKCMFTSGDTETEEHDTGYAKLLADPC-EYLDPFAFWEWVASTLDIYGETYLAIQKNKSGT--- 127 (518) Q Consensus 52 v~~~v~~ia~~ia~lp~~v~~~~~~~~~~~~~~~~~~l~~~PN-~~~t~~~f~~~~~~~~ll~G~~~~~i~~~~~G~--- 127 (518) +..+++.++..+.+-|..+- ....+.+..|+..-. ...+..+|.+.++...+.+|.+++++.....+. T Consensus 90 ~~~tl~~l~G~vfrk~p~~~--------~~~~~~l~~l~~d~D~~G~~L~~f~~~~~~~~l~~G~~~ilVD~P~~~~T~a 161 (488) T protein:vir:96 90 VNPTMNAITGAVMRREPEFD--------TMDNPVLIGLRDNIDGKGNGIDQECKQALNALQWGSRCGWLVRSHPESATMA 161 (488) T ss_pred hHHHHHHhcchhhccCceec--------cCCcHHHHHHHhccCCCCCCHHHHHHHHHHHHHhcCeEEEEEecCCCcCCHH Confidence 55666666555555554441 111123445555433 357889999999999999999999987654321 Q ss_pred --------eeeeeeeCCcc-----------------eEE-----EeccCc--ceEEEEee--ccC---------CCCcee Q lcl|Aclame:pro 128 --------PEKLMPMHPSR-----------------VAI-----KRNSRT--GRYEYYFQ--AGA---------GVGTQL 164 (518) Q Consensus 128 --------~~~l~~l~p~~-----------------v~~-----~~~~~~--~~~~~~~~--~~~---------~~~~~~ 164 (518) |. +..+.|.. +.+ ..+... ....+.+. ..+ ...+.. T Consensus 162 de~~~~~rPy-~~~~~a~~IinW~~~~v~G~~~L~~v~lrE~~~~~D~~~~~~~~~~~~~~l~~g~~~v~~~~~~~~~~e 240 (488) T protein:vir:96 162 DWNKGKKLPT-AAFYDALHIIDWEVEYIDGEEKLTYLSLLEDYQERDGGTYVSKQRLINHRLVDGLCEFQEVTDDEYSDE 240 (488) T ss_pred HHHHhcCCcE-EEEechhhhcCcceeccCCceeeEEEEEEEEEEeccCCCcccceEEEEEEEECcEEEEEEEecCCcccc Confidence 11 11111111 111 111110 11111110 000 000000 Q ss_pred --------EEEeeeeeEEeecCCCCcccccchHHHHHHH-HHHHHHHHHHHHHHHHHccCCcceeeeeCCcCCHHHHHHH Q lcl|Aclame:pro 165 --------VSFADDEVVPIRFFNPDGLERGLSLMESLKS-TIFSEDSSRNATAAMWKNAGRPNLVLRHEKRLSPEAQQRL 235 (518) Q Consensus 165 --------~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~-~i~~~~~~~~~~~~~~~ng~~p~gil~~~~~~~~e~~~~~ 235 (518) ..+..-.++++... ..+...|.||+..++. .+........+... +...+.|..++...+ .+++..... T Consensus 241 ~~~~~~g~~~l~~IP~v~~~~~-~~~~~~~~pPLldLA~lnl~Hy~~ssd~~~i-l~~~~~p~lv~~~~~-~~~~~~~~~ 317 (488) T protein:vir:96 241 WTPVLINSKQSDTIPFFLASSQ-SNEWCIDSTPLTSLAEISLSIYVMNAYSNKA-MILANEAKWMVDMGD-MNKTMASEM 317 (488) T ss_pred eEeecCCCcccCeeEEEEEecC-CCCCCCCCCchHHHHHHHHHHHhhhhHHHHH-HHhcCCceeeeccCC-CCccccccc Confidence 01122234444322 2344568888776664 55555555555444 446667766654332 333322211 Q ss_pred HHHHHHHhcCccccccce-eccCC-cccccccCChhhHHHHHHHHHHHHHHHHHhccchHhhccccccccccHHHHHHHH Q lcl|Aclame:pro 236 REQFDRAHAGSSNTGKTM-VVEEG-MEPIPLQLTAVEMQFIEARQLNREEVCGVYDIAPPIVHILDRATFSNISAQMRAF 313 (518) Q Consensus 236 ~~~~~~~~~g~~n~g~~~-vl~~g-~~~~~~~~~~~d~q~~e~~~~~~~~Ia~~fgVpp~~lg~~~~~~~s~~e~~~~~~ 313 (518) . ..|..-.++.+ ..+.| ++|.+.+ +..+ ..+.++...+++.. .| ..++-. ..+.-+......... T Consensus 318 ~------~~g~~~~~~~~~~~~~g~~~~~e~~--~~~l-~~~~l~~l~~qm~~-~G--a~l~~~-~~~~Ta~~~~~~~~~ 384 (488) T protein:vir:96 318 N------PLGFTLAGRMPYYVKNGDVKVIQAQ--FSPE-TENKVEKLFEQAVK-VG--ASLFTQ-QSNETATGAAIRSGS 384 (488) T ss_pred c------cceeeecccccccccCCceeecCCc--hhHH-HHHHHHHHHHHHHH-Hh--HhhccC-CCcchHHHHHHHHHH Confidence 1 01221112222 22333 3444443 3222 12222222233222 11 122211 111111222333444 Q ss_pred HHHHHHHHHHHHHHHHHhhhc--chh-h------c--cceeeechhhhhc-cCHHHHHHHHHHHHhCCCcCHHHHHHHHh Q lcl|Aclame:pro 314 YRDTMAIPIARIQSAMDKYVG--QYW-V------R--KNRMKFDIDDVIQ-PDWEAKSESTQKMVNSGVATPNEGREIMG 381 (518) Q Consensus 314 ~~~~l~P~~~~ie~~ln~~l~--~~~-~------~--~~~~~fd~~~l~~-~d~~~~~~~~~~~~~~g~~T~NE~R~~~g 381 (518) ....|.-+...+++++++.|- ..+ + . ...+.++.+-... .|.. ..+.+-+++..|.++....++.+- T Consensus 385 ~~S~L~~~a~~le~al~~~l~~~A~w~g~~~~~~~~~~~~~~in~dF~~~~ld~~-~~~al~~~~~~G~Is~~t~~~~L~ 463 (488) T protein:vir:96 385 STASMATLGNNVEDTVRNMLRFIMRYFEGTNLYVNPDELVFKLNRDYFDVEVNPQ-MLQVAYAAMMEGNLPQVSWFELLK 463 (488) T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCcCccceEEEeccCCCCccCCHH-HHHHHHHHHhcCCCCHHHHHHHHH Confidence 567788888889999887652 111 1 1 1223333322222 2444 566666788899999988877764 Q ss_pred CCCCCCccCceeeecccccccccccccC Q lcl|Aclame:pro 382 LPRSDDPKADELYANSALQPLGATPDGA 409 (518) Q Consensus 382 ~~pi~~~~gD~~~~~~n~~~~~~~~~~~ 409 (518) .--+=+|.-+.--. .-.+...+-+- T Consensus 464 ~~gvl~~d~~~e~~---~~~ie~~g~~~ 488 (488) T protein:vir:96 464 RARVVRGDMSKEEF---DEHIAELGFGM 488 (488) T ss_pred hCCcCCccCCHHHH---HHHHhhcCCCC Confidence 42221010000000 00000000000 No 258 >protein:vir:10447 Length: 536 # NCBI annotation: head-to-tail joining protein # Family: family:all:481 # MgeID: mge:184 # MgeName: phiA1122 # Cross-refs: genbank:acc:NP_848294;genbank:gi:30387485;genbank:GeneID:1733984 Probab=26.68 E-value=1.9 Score=19.03 Aligned_cols=406 Identities=9% Similarity=0.031 Sum_probs=129.3 Q ss_pred CCCCCCCCCccccc------------cccchhhhhhhccCccCCcccCc--cchhhHHH---HhhhHHHHHHHHHHHHhh Q lcl|Aclame:pro 1 MLLANGQTLSAPAM------------AELSPQMQDSYYYAPAVGMQLER--QFSLYGGI---YKNQPWVRTVIAKRAQAL 63 (518) Q Consensus 1 ~~f~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~---~~~~~~v~~~v~~ia~~i 63 (518) .+|........... ..+..-+.+... |. +.+..- ........ -.....|..-.+.+. T Consensus 41 ~~~~~~~~~~~~~~~~~~dst~~~a~~~Laa~l~~~lt--P~-~~WFrl~~~d~~~~~~~~~~~~~~~v~~~L~~ve--- 114 (536) T protein:vir:10 41 SLFPKDSDNASTDYQTPWQAVGARGLNNLASKLMLALF--PM-QTWMRLTISEYEAKQLLSDPDGLAKVDEGLSMVE--- 114 (536) T ss_pred cccCCCCCcccccccccccccHHHHHHHHHHHHHhhhc--CC-CcccccccChhhhhccccchhhHHHHHHHHHHHH--- Confidence 44433211111000 000000000000 10 001000 00000000 000011111111111 Q ss_pred ccCceEEEEecCCceeeecchHHHHHhhccCccCCHHHHHHHHHHHHHHcCCeeEEeeeCCCCcee--eeeeeCCcceEE Q lcl|Aclame:pro 64 ARLPVKCMFTSGDTETEEHDTGYAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQKNKSGTPE--KLMPMHPSRVAI 141 (518) Q Consensus 64 a~lp~~v~~~~~~~~~~~~~~~~~~l~~~PN~~~t~~~f~~~~~~~~ll~G~~~~~i~~~~~G~~~--~l~~l~p~~v~~ 141 (518) +.++..+.+-| ++.=+.....+++.+||+.+++..+..+.+. ..||+ .++.+ T Consensus 115 --------------------~~~~~~l~~sn----f~~~~~~~~~~L~~~G~a~ly~~e~~~~~~~~~~~~pl--~~~~v 168 (536) T protein:vir:10 115 --------------------RIIMNYIESNS----YRVTLFEALKQLVVAGNVLLYLPEPEGSNYNPMKLYRL--SSYVV 168 (536) T ss_pred --------------------HHHHHHHHhcC----cHHHHHHHHHHHHhHCcEeEEEeeCCCCceeeEEEEEc--CeEEE Confidence 11122233333 3333445577888899999887665544333 34444 45555 Q ss_pred EeccCcceE-----------------------------------EEEeeccCCCC----------ce-------eEEEee Q lcl|Aclame:pro 142 KRNSRTGRY-----------------------------------EYYFQAGAGVG----------TQ-------LVSFAD 169 (518) Q Consensus 142 ~~~~~~~~~-----------------------------------~~~~~~~~~~~----------~~-------~~~~~~ 169 (518) ..+..|... .|....-+..+ +. ...|.. T Consensus 169 ~~d~~G~vd~i~r~~~~t~~~l~~~fg~~~~~~~~~~~~~~~v~v~~~V~~~~~~~~~~~~~e~~g~~v~~~~g~~~f~~ 248 (536) T protein:vir:10 169 QRDAFGNVLQMVTRDQIAFGALPEDIRKAVEGQGGEKKADETIDVYTHIYLDEASGEYLRYEEVEGMEVQGSDGTYPKEA 248 (536) T ss_pred eeCCCCCeeEEeeeeeccHHHHHHhhhhhhcccccccCcccceEEEEEEEEecCCCcEEEEEeecCcccccccccccccc Confidence 555444221 11000000000 00 001222 Q ss_pred eeeEEeecCCCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHccCCcceeeeeCCcCCHHHHHHHHHHHHHHhcCcccc Q lcl|Aclame:pro 170 DEVVPIRFFNPDGLERGLSLMESLKSTIFSEDSSRNATAAMWKNAGRPNLVLRHEKRLSPEAQQRLREQFDRAHAGSSNT 249 (518) Q Consensus 170 ~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~p~gil~~~~~~~~e~~~~~~~~~~~~~~g~~n~ 249 (518) ...+.+|....++..||.||.+-+...+.....+.+.......-...|...+.-+....+... ..+.. T Consensus 249 ~P~i~~Rw~~~~ge~YGrgp~~~~l~D~k~L~~l~~~~l~~~~~a~~~~~lv~p~g~~~~~~~----------~~~~~-- 316 (536) T protein:vir:10 249 CPYIPIRMVRLDGESYGRSYIEEYLGDLRSLENLQEAIVKMSMISSKVIGLVNPAGITQPRRL----------TKAQT-- 316 (536) T ss_pred CCceeeeeeecCCCccccchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccCcccccchhhh----------ccCCC-- Confidence 334556666667788999999999999999998888887766666666544432222222211 11111 Q ss_pred ccc-eeccCCcccccccCChhhHH-HHHHHHHHHHHHHHHhccchHhhccccccccccHHH--HHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 250 GKT-MVVEEGMEPIPLQLTAVEMQ-FIEARQLNREEVCGVYDIAPPIVHILDRATFSNISA--QMRAFYRDTMAIPIARI 325 (518) Q Consensus 250 g~~-~vl~~g~~~~~~~~~~~d~q-~~e~~~~~~~~Ia~~fgVpp~~lg~~~~~~~s~~e~--~~~~~~~~~l~P~~~~i 325 (518) |.+ .-..+.+...++... .+.+ ..+..+.....|-.+|-+.. +..-+. ..-+.++ ....-....|.|.+.++ T Consensus 317 g~~v~g~~~~v~~~~~~~~-~~~~~~~~~i~~~~~rI~~af~~~~--l~~~~~-~r~TAtEV~~r~~E~~~~LG~v~~rl 392 (536) T protein:vir:10 317 GDFVTGRPEDISFLQLEKQ-ADFTVAKAVSDAIEARLSFAFMLNS--AVQRTG-ERVTAEEIRYVASELEDTLGGVYSIL 392 (536) T ss_pred cceecCCcccceeeecccc-ccchHHHHHHHHHHHHHHHHHhhhh--cccCCC-CCccHHHHHHHHHHHHHHhhHHHHHH Confidence 111 112233334444332 2232 24455666778888885542 211111 1112222 22233334455555555 Q ss_pred HHHHHhh-------------hcchhhc-cceeeechhhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHHhCCCCCCccCc Q lcl|Aclame:pro 326 QSAMDKY-------------VGQYWVR-KNRMKFDIDDVIQPDWEAKSESTQKMVNSGVATPNEGREIMGLPRSDDPKAD 391 (518) Q Consensus 326 e~~ln~~-------------l~~~~~~-~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~T~NE~R~~~g~~pi~~~~gD 391 (518) .++|=.. +++.... ...++|. +.+ ....+...+..+.. + .+ ...++.|- -.| T Consensus 393 ~~Ell~Pli~r~~~il~r~g~lP~~p~~~v~~~~v-s~l---~~l~r~~~~~~l~~--~--~~---~la~~~P~---~ld 458 (536) T protein:vir:10 393 SQELQLPLVRVLLKQLQATQQIPELPKEAVEPTIS-TGL---EAIGRGQDLDKLER--C--VT---AWAALAPM---RDD 458 (536) T ss_pred HHHHHHHHHHHHHHHHHhCCCCCCCChhhccceEE-ecH---HHHHHHHHHHHHHH--H--HH---HHHhhchh---hhc Confidence 4444322 3332211 1122221 111 11112222221111 0 00 00111110 011 Q ss_pred eeeecccccccccccccCCCCCCCCCCCCcccCCCCCccCCccccccccChhhhcchhHHHHHHHHHHhhccCcchhHHH Q lcl|Aclame:pro 392 ELYANSALQPLGATPDGAVEGEEAPAPKRPASTPVASLDQSPPASVPGLSPTNSDRSTDSGKTEPRRLMQKPPPKESSPK 471 (518) Q Consensus 392 ~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ 471 (518) ..+ |. +...... ++.-+..+..--++.++-+.........+.....+.. T Consensus 459 ~~i---d~---d~~~~~~-------------------------a~~~Gv~p~~~irt~eev~~~r~q~~~~~~~~~~a~~ 507 (536) T protein:vir:10 459 PDI---NL---AMIKLRI-------------------------ANAIGIDTSGILLTEEQKQQKMAQQSMQMGMDNGAAA 507 (536) T ss_pred ccC---CH---HHHHHHH-------------------------HHHcCCCchhhcCCHHHHHHHHHHHHHHHHHHHHHHH Confidence 100 00 0000000 0000000000000111100000000000000000000 Q ss_pred HHHHH-HHHhhhhhhhcccccchhhhhhhHHHHHHHHHHHHh Q lcl|Aclame:pro 472 HLRAV-KGAMGRGKDIKGFALQLAEKYPDDLEDILLAVQLAL 512 (518) Q Consensus 472 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 512 (518) -...+ ..+....++.++..-+.| .+++. T Consensus 508 ~~~~~~~~~~~~~~~~~~~~~~~g-------------~~~~~ 536 (536) T protein:vir:10 508 LAQGMAAQATASPEAMAAAADSVG-------------LQPGI 536 (536) T ss_pred HHHHHHHHHhcCchhHHhhhhccc-------------cCCCC Confidence 00000 011111111111111111 01111 No 259 >protein:vir:101418 Length: 569 # NCBI annotation: Prt # Family: family:all:9458 # MgeID: mge:1512 # MgeName: P1 # Cross-refs: genbank:acc:YP_006480;genbank:gi:46401636;genbank:GeneID:2777482 Probab=26.67 E-value=1.9 Score=19.03 Aligned_cols=412 Identities=11% Similarity=0.075 Sum_probs=151.6 Q ss_pred CCCCCCCC------------CccccccccchhhhhhhccCccCCcccCccchhhH---HHHhhhHHHHHHHHHHHHhh-c Q lcl|Aclame:pro 1 MLLANGQT------------LSAPAMAELSPQMQDSYYYAPAVGMQLERQFSLYG---GIYKNQPWVRTVIAKRAQAL-A 64 (518) Q Consensus 1 ~~f~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~v~~~v~~ia~~i-a 64 (518) .+|.+.-+ ....+... ....+..|-+. .....++..... +.....|.+.++.++=.... + T Consensus 41 ~~~s~~g~p~~~~~~~~~~~~~~t~~~D-~~~~g~~~~~~---~~~~pr~R~qiY~~~eeM~~~p~Ia~AlniHVtaALg 116 (569) T protein:vir:10 41 YLFSRAGAPVQLSGFLGGKPGDSGMAGD-GLVDGSRFIFD---EVQLPEDRLQRYPLLEEMAVYSTIATALNIHITHALS 116 (569) T ss_pred eEEeecCcchhhhhhhccCccccchhhh-hHHHHHHHHhh---hccCchhHHHHHHHHHHHhcCchhhhhhhhhhheeec Confidence 33333221 11111000 00011111110 011222221111 11234566666666533221 1 Q ss_pred -----cCceEEEEe-cCCceee-ecchHHHHHhhccCccCCHHHHHHHHHHHHHHcCCeeEEeeeCCCCceeeee---ee Q lcl|Aclame:pro 65 -----RLPVKCMFT-SGDTETE-EHDTGYAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQKNKSGTPEKLM---PM 134 (518) Q Consensus 65 -----~lp~~v~~~-~~~~~~~-~~~~~~~~l~~~PN~~~t~~~f~~~~~~~~ll~G~~~~~i~~~~~G~~~~l~---~l 134 (518) +.-+.+... ++++... ........+.. +-.-....-...+.++++.+|.+|+.|.-+.+-.++.|+ .. T Consensus 117 gde~TGd~vfI~p~~~~~~a~~daakai~~el~~--dl~~~iNr~~~~lA~~~~aFGdsYaRiY~~~~~GV~dl~~s~yt 194 (569) T protein:vir:10 117 FDKKTGQTFSIVPVHNGNDSDYDAAQALCGELMN--DIGRTINKEVAGWAFIMSVFGVAYVRPYAKEGIGITSFECSYYT 194 (569) T ss_pred ccccccceEEEEeecCCCCCcchHHHHHHHHHHH--HHHHHHHHHhhHHHHHHHhhhhhheeeeccCCceeEEEEecccc Confidence 122223222 1111000 00011111111 011112233457788899999999998766554455543 34 Q ss_pred CCcceEEEeccCcceEEEEeeccCCCCcee-EEEeeeeeEEeec-----------------------CCCC-----cccc Q lcl|Aclame:pro 135 HPSRVAIKRNSRTGRYEYYFQAGAGVGTQL-VSFADDEVVPIRF-----------------------FNPD-----GLER 185 (518) Q Consensus 135 ~p~~v~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~vih~~~-----------------------~~~~-----~~~~ 185 (518) .|.-+++.... +....+..........+ ..+.+..++-+|. ..++ -..+ T Consensus 195 ~PsfIqpFE~g--~~tvGF~~~~~~~~~~ti~~l~p~qm~rmKmPrm~~i~q~~~v~~g~~~~~L~~d~~~~~Pi~psn~ 272 (569) T protein:vir:10 195 LPSFIKEFEVS--GNLAGFSGDYLKDASGKMVFADPWAIIPMKIPYWRPKSNLMPVHTGHKAYSLLDNPEERTPIETQNY 272 (569) T ss_pred cccccchhhhc--CceEEeecccCCccccceeeechhhhhhhcccceeeccccchhhhhhhheeecccccccccccchhh Confidence 45555554422 22222111111111111 1111111111111 1111 1247 Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHccCCcceeeee-CCcCCHHH-----------HHHHHHHHHHHhcCccccc--- Q lcl|Aclame:pro 186 GLSLMESLKSTIFSEDSSRNATAAMWKNAGRPNLVLRH-EKRLSPEA-----------QQRLREQFDRAHAGSSNTG--- 250 (518) Q Consensus 186 G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~p~gil~~-~~~~~~e~-----------~~~~~~~~~~~~~g~~n~g--- 250 (518) |-|-+..+.+.......+.....+.=-+.....-+|.+ -.++++.+ .++.++.+++...|.++-. T Consensus 273 GgSFL~~ae~pf~~l~~Al~sL~~qri~dSv~~~~Itlnm~gM~p~qr~~y~r~lt~~LKr~~d~ie~a~~gg~~~~~~~ 352 (569) T protein:vir:10 273 GTSLLEYAYEPYMNLRSAIRSLKATRFNASKIDRIIGLAMNSLDPVKAADYSRTITQTLKRAADLMERRARGANNMPTVT 352 (569) T ss_pred hhHHHHHHHhHHHHHHHHHHhccchhhHHHHHhHHhhccccCCCHHHHhHHHHHHHHHHHHHHHHHHHHhccCccccccc Confidence 88888888776555443332222111111222223322 23455544 4556677777776655322 Q ss_pred --cceeccCCccccccc--CChhhHHHHHHHHHHHHHHHHHhccchHhhccc--------cccccccHHH--HHHHHHHH Q lcl|Aclame:pro 251 --KTMVVEEGMEPIPLQ--LTAVEMQFIEARQLNREEVCGVYDIAPPIVHIL--------DRATFSNISA--QMRAFYRD 316 (518) Q Consensus 251 --~~~vl~~g~~~~~~~--~~~~d~q~~e~~~~~~~~Ia~~fgVpp~~lg~~--------~~~~~s~~e~--~~~~~~~~ 316 (518) -+++.+++-...++. .-+.+.-=+|-.-+..+.+|.++|+.+.|||.. +.+.+-++.| .+...++. T Consensus 353 ~H~LPv~gekq~~~tvDt~~~~A~~~gIEdvM~~~R~LagaLGlD~SMlGwAD~LsGGLGeGG~frtSaQaa~RS~~iRq 432 (569) T protein:vir:10 353 NTLLPIMGDGKGQMTIDTQTIQADINGIEDILTYMRQLAAALGLDYTLLGWADQMSGGLGEGGFLRTAIQAAMRASWIQQ 432 (569) T ss_pred eeeeeeecCccccccccccccccCcccHHHHHHHHHHHHhhhccchhHhhHHHHhcccccccHHHHHHHHHHHHHHHHHH Confidence 233444443222222 223333345666778899999999999999842 2222222222 23344555 Q ss_pred HHHHHHHHHHHH-HHhh---hcchhhccceeeechh--hhhcc---CHHHHHHHHHHH-------HhCCCcCHHHH--HH Q lcl|Aclame:pro 317 TMAIPIARIQSA-MDKY---VGQYWVRKNRMKFDID--DVIQP---DWEAKSESTQKM-------VNSGVATPNEG--RE 378 (518) Q Consensus 317 ~l~P~~~~ie~~-ln~~---l~~~~~~~~~~~fd~~--~l~~~---d~~~~~~~~~~~-------~~~g~~T~NE~--R~ 378 (518) ++.-++.++-+. +..| .++...+.+.++|.-. .+.++ ..+.++..+..+ .++..+-.||. |. T Consensus 433 a~~e~in~iidiH~~fKYgevf~~~drP~~V~F~s~~tAl~~E~~~n~~~raN~a~i~~Q~la~l~e~n~Lg~de~~m~y 512 (569) T protein:vir:10 433 GVEEFIQRAIDIHLAFKYGKVYPEGDRPYKIEFHSVNTALQQEHNDNRDSQANYATIVTQILDAVSNNSVLANSDAFKRY 512 (569) T ss_pred HHHHHHHHHHHHHhhhhcCcccCCCCcceEEEeccchHHHHHHHHhHHHHHHHHHHHHHHHHHHhhhcccccccHHHHHH Confidence 554444443222 1222 3455556777777632 23222 222333332222 22333333332 11 Q ss_pred ----HHhCCC----------CCCccCceeeecccccccccccccCCCCCCCCCCC-CcccCCCCCccCCcc Q lcl|Aclame:pro 379 ----IMGLPR----------SDDPKADELYANSALQPLGATPDGAVEGEEAPAPK-RPASTPVASLDQSPP 434 (518) Q Consensus 379 ----~~g~~p----------i~~~~gD~~~~~~n~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 434 (518) .+|++- ...|.-+++++..-+ ..+|+.- +-.+. .-.++.+.. T Consensus 513 ~l~d~~~~De~~~e~l~ae~~akp~DEe~~~~~~~-------------~~~~~~~~~~~~~-~~~~~~~~~ 569 (569) T protein:vir:10 513 LFSDVLEIDEKISEALVNELKAKSEDDDHLMDSII-------------KTPPQELAQILES-VFKEGNDND 569 (569) T ss_pred HHHHHhhcchhHHHHHHhhcCCCcchhHHHHHHHh-------------cCChHHHHHHHHH-HhhccCCCC Confidence 122210 000111111110000 0000000 00000 000000000 No 260 >protein:vir:7208 Length: 524 # NCBI annotation: gp20 portal vertex protein of head # Family: family:all:1036 # MgeID: mge:142 # MgeName: T4 # Cross-refs: genbank:acc:NP_049782;genbank:gi:9632594;genbank:GeneID:1258582 Probab=24.57 E-value=2.2 Score=18.75 Aligned_cols=406 Identities=9% Similarity=0.046 Sum_probs=156.2 Q ss_pred CCC---------CC------------CC-CCccccc--cccchhhhh-----hhccCcc--CC-c-----ccCccchhhH Q lcl|Aclame:pro 1 MLL---------AN------------GQ-TLSAPAM--AELSPQMQD-----SYYYAPA--VG-M-----QLERQFSLYG 43 (518) Q Consensus 1 ~~f---------~~------------~~-~~~~~~~--~~~~~~~~~-----~~~~~~~--~~-~-----~~~~~~~~~~ 43 (518) |-| ++ +- +..+|.. +...-.+.. .+.+.-. -| . ........|+ T Consensus 1 m~~~~L~~~~~w~~~de~~~~~~~~~~~~S~~~p~~~Dga~e~~~~~~~~a~~~~g~~~~~~g~~e~~~~~~~eLI~~YR 80 (524) T protein:vir:72 1 MKFNVLSLFAPWAKMDERNFKDQEKEDLVSITAPKLDDGAREFEVSSNEAASPYNAAFQTIFGSYEPGMKTTRELIDTYR 80 (524) T ss_pred CCCchhhHhhccccCcchhhhhhhccCCccccCccCCCCceeeeecccccccccceeeeehhcccccccchHHHHHHHHH Confidence 222 11 11 1111110 000000000 1111100 00 0 0111123345 Q ss_pred HHHhhhHHHHHHHHHHHHhhcc-----CceEEEEecCCceee---ecchHHHHHhhccCccCCHHHHHHHHHHHHHHcCC Q lcl|Aclame:pro 44 GIYKNQPWVRTVIAKRAQALAR-----LPVKCMFTSGDTETE---EHDTGYAKLLADPCEYLDPFAFWEWVASTLDIYGE 115 (518) Q Consensus 44 ~~~~~~~~v~~~v~~ia~~ia~-----lp~~v~~~~~~~~~~---~~~~~~~~l~~~PN~~~t~~~f~~~~~~~~ll~G~ 115 (518) ++ +.+|-|..||+-|.+.+.- -|..|--.+-+-... .....+..++.--+-...++++ ++.+++.|. T Consensus 81 ~m-a~~pEvd~Av~eIVneaiv~d~~~~pV~l~L~~~~~s~~iK~kI~eeF~~Il~ll~F~~~~~~~----fR~WYVDgR 155 (524) T protein:vir:72 81 NL-MNNYEVDNAVSEIVSDAIVYEDDTEVVALNLDKSKFSPKIKNMMLDEFSDVLNHLSFQRKGSDH----FRRWYVDSR 155 (524) T ss_pred HH-hhccchhhHHHHhhcceeEecCCCceEEEEecCcCcchHHHHHHHHHHHHHHHHhccchhhhHH----HhhheeeeE Confidence 55 6889999999999988753 233332222111111 1111222333333344445554 455678999 Q ss_pred eeEEeeeCCC---CceeeeeeeCCcceEEEec----cCcc-------eEEEEeeccC---------CCCceeEEEeeeee Q lcl|Aclame:pro 116 TYLAIQKNKS---GTPEKLMPMHPSRVAIKRN----SRTG-------RYEYYFQAGA---------GVGTQLVSFADDEV 172 (518) Q Consensus 116 ~~~~i~~~~~---G~~~~l~~l~p~~v~~~~~----~~~~-------~~~~~~~~~~---------~~~~~~~~~~~~~v 172 (518) .|..++-+.+ ..+.+|..|+|..++.++. .+++ ..+|.|.... ...+..++++.+-| T Consensus 156 i~fhKiid~k~pk~GI~Elr~lDPr~i~~vr~i~~~~~~~~~vi~~~~e~f~Y~~~~~~y~~~g~~~~~~~~ikI~~dAI 235 (524) T protein:vir:72 156 IFFHKIIDPKRPKEGIKELRRLDPRQVQYVREIITETEAGTKIVKGYKEYFIYDTAHESYACDGRMYEAGTKIKIPKAAV 235 (524) T ss_pred EEEEEEEeCCCccccceeeeeeCCccceeeeeeccCCCccchhhcchhhheeeccCccccccCccccCCCcceecchhhe Confidence 9998876533 3589999999999976332 1111 1122222111 11234566666666 Q ss_pred EEeecCCCC-cccccchHHHHHHHHHHHHHHHHHHHHHHHHccCCcceeeeeCC-cCCHHHHHHHHHHHHHHhcC----c Q lcl|Aclame:pro 173 VPIRFFNPD-GLERGLSLMESLKSTIFSEDSSRNATAAMWKNAGRPNLVLRHEK-RLSPEAQQRLREQFDRAHAG----S 246 (518) Q Consensus 173 ih~~~~~~~-~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~p~gil~~~~-~~~~e~~~~~~~~~~~~~~g----~ 246 (518) .|....-.+ +...=+|-|..|...+....-++...--+==.-+.-+-|+.++- .+.+..+++..+.+-..|.. . T Consensus 236 ~y~hSGL~d~~~~~i~gyLhkAiKp~NQLkmlEDAlVIYRitRAPeRRvFYIDvGnlPk~KAeqYl~~im~k~KNklvYD 315 (524) T protein:vir:72 236 VYAHSGLVDCCGKNIIGYLHRAVKPANQLKLLEDAVVIYRITRAPDRRVWYVDTGNMPARKAAEHMQHVMNTMKNRVVYD 315 (524) T ss_pred eeeeccceeCCCCceeccchhhhHhHHhhhHHHhhHHHHhhhccccceEEEEecCCCCchhHHHHHHHHHHhcCceeEEe Confidence 554422111 11123677888887777777776654433223333344554442 23333333333333333221 1 Q ss_pred ccccc------cee-c-----c-----CCcccccccCChhhHHHHHHHHHHHHHHHHHhccchHhhccccc--cccccHH Q lcl|Aclame:pro 247 SNTGK------TMV-V-----E-----EGMEPIPLQLTAVEMQFIEARQLNREEVCGVYDIAPPIVHILDR--ATFSNIS 307 (518) Q Consensus 247 ~n~g~------~~v-l-----~-----~g~~~~~~~~~~~d~q~~e~~~~~~~~Ia~~fgVpp~~lg~~~~--~~~s~~e 307 (518) .+.|. .+- + + .|.+++.+... +.+.-++-.++..+.+.++++||.+-+..... -+.+... T Consensus 316 a~TGev~ddrk~msMlEDyWLpRReGgrgTEItTLpGg-qnlgem~DV~YF~kkLy~aLnVP~sRl~~d~~~~f~~gr~~ 394 (524) T protein:vir:72 316 ASTGKIKNQQHNMSMTEDYWLQRRDGKAVTEVDTLPGA-DNTGNMEDIRWFRQALYMALRVPLSRIPQDQQGGVMFDSGT 394 (524) T ss_pred CCCCeeccchhhhhhHhhhcccccCCCcccceeecccc-CCcChHHHHHHHHHHHHHHhCCchhhcCCCCCccccccccc Confidence 11121 111 1 1 23444444322 22333344556678899999999998832211 1211111 Q ss_pred HH---HHHHHHHHHHHHHHHHHHHHHhhh---------cch--hh---ccceeeechhhh----hccC-HHHHHHHHHHH Q lcl|Aclame:pro 308 AQ---MRAFYRDTMAIPIARIQSAMDKYV---------GQY--WV---RKNRMKFDIDDV----IQPD-WEAKSESTQKM 365 (518) Q Consensus 308 ~~---~~~~~~~~l~P~~~~ie~~ln~~l---------~~~--~~---~~~~~~fd~~~l----~~~d-~~~~~~~~~~~ 365 (518) +- ...|. .-|.-+..++...+...| ++. +. ....+.|..+.. .... ...|...+..+ T Consensus 395 EItRDEikF~-KFI~rLR~rFs~~f~~~Lk~qLilKgiit~eew~~i~~~I~~~f~~Dn~f~ElKe~Eil~~R~~~l~~~ 473 (524) T protein:vir:72 395 SITRDELTFA-KFIRELQHKFEEVFLDPLKTNLLLKGIITEDEWNDEINNIKIEFHRDSYFAELKEAEILERRINMLTMA 473 (524) T ss_pred hhhHHHHHHH-HHHHHHHHHHHHHHHHHHHHhhhhccCCCHHHHHHHhhcceEEeeecchHHHHHHHHHHHHHHHHHHHh Confidence 11 11222 223333344443333322 121 11 122333332221 1111 12233333322 Q ss_pred Hh--CCCcCHHHHHHH-HhCCCCCCccCceeeecccccccccccccCCCCCCCCCCCCcccCCCCCccCCc Q lcl|Aclame:pro 366 VN--SGVATPNEGREI-MGLPRSDDPKADELYANSALQPLGATPDGAVEGEEAPAPKRPASTPVASLDQSP 433 (518) Q Consensus 366 ~~--~g~~T~NE~R~~-~g~~pi~~~~gD~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 433 (518) -. .-.++.+=+|+. |.+.--+-..-++ . +.. ....+--++ ...+.++- T Consensus 474 dpyvGky~s~~yi~k~ILr~tDeei~~~~k-----~---I~~-------E~k~~~~~~-----~~~~~~~f 524 (524) T protein:vir:72 474 EPFIGKYISHRTAMKDILQMTDEEIEQEAK-----Q---IEE-------ESKEARFQD-----PDQEQEDF 524 (524) T ss_pred hhhhcccchhHHHHHHHhccCHHHHHHHHH-----H---HHH-------HhhcCCCCC-----CchhhhcC Confidence 11 113344444332 3332110000000 0 000 000000000 00000111 No 261 >protein:vir:103458 Length: 524 # NCBI annotation: portal vertex of the head # Family: family:all:1036 # MgeID: mge:1542 # MgeName: RB32 # Cross-refs: genbank:acc:YP_803110;genbank:gi:116326390;genbank:GeneID:4405487 Probab=22.68 E-value=2.4 Score=18.49 Aligned_cols=406 Identities=9% Similarity=0.047 Sum_probs=156.2 Q ss_pred CCC---------CC------------CC-CCccccc--cccchhhhh-----hhccCcc--CC-c-----ccCccchhhH Q lcl|Aclame:pro 1 MLL---------AN------------GQ-TLSAPAM--AELSPQMQD-----SYYYAPA--VG-M-----QLERQFSLYG 43 (518) Q Consensus 1 ~~f---------~~------------~~-~~~~~~~--~~~~~~~~~-----~~~~~~~--~~-~-----~~~~~~~~~~ 43 (518) |-| ++ +- +..+|.. +...-.+.. .+.+.-. -| . ........|+ T Consensus 1 m~~~~L~~~~~w~~~de~~~~~~~~~~~~S~~~p~~~Dga~e~~~~~~~~a~~~~g~~~~~~g~~e~~~~~~~eLI~~YR 80 (524) T protein:vir:10 1 MKFNVLSLFAPWAKMDERNFKDQEKEDLVSITAPKLDDGAREFEVSSNEAASPYNAAFQTIFGSYEPGMKTTRELIDTYR 80 (524) T ss_pred CCCchhhHhhccccCcchhhhhhhccCCccccCccCCCCceeeeecccccccccceeeeehhcccccccchHHHHHHHHH Confidence 221 11 11 1111110 000000000 1111100 00 0 0111123345 Q ss_pred HHHhhhHHHHHHHHHHHHhhcc-----CceEEEEecCCceee---ecchHHHHHhhccCccCCHHHHHHHHHHHHHHcCC Q lcl|Aclame:pro 44 GIYKNQPWVRTVIAKRAQALAR-----LPVKCMFTSGDTETE---EHDTGYAKLLADPCEYLDPFAFWEWVASTLDIYGE 115 (518) Q Consensus 44 ~~~~~~~~v~~~v~~ia~~ia~-----lp~~v~~~~~~~~~~---~~~~~~~~l~~~PN~~~t~~~f~~~~~~~~ll~G~ 115 (518) ++ +.+|-|..||+-|.+.+.- -|..|--.+-+-... .....+..++.--+-...++++ ++.+++.|. T Consensus 81 ~m-a~~pEvd~Av~eIVneaiv~d~~~~pV~l~L~~~~~s~~iK~kI~eeF~~Il~ll~F~~~~~~~----fR~WYVDgR 155 (524) T protein:vir:10 81 NL-MNNYEVDNAVSEIVSDAIVYEDDTEVVALNLDKSKFSPKIKNMMLDEFNDVLNHLSFQRKGSDH----FRRWYVDSR 155 (524) T ss_pred HH-hhccchhhHHHHhhcceeEecCCCceEEEEecCcCcchHHHHHHHHHHHHHHHHhccchhhhHH----HhhheeeeE Confidence 55 6889999999999988753 233332222111111 1111222333333344445554 455678999 Q ss_pred eeEEeeeCCC---CceeeeeeeCCcceEEEec----cCcc-------eEEEEeeccC---------CCCceeEEEeeeee Q lcl|Aclame:pro 116 TYLAIQKNKS---GTPEKLMPMHPSRVAIKRN----SRTG-------RYEYYFQAGA---------GVGTQLVSFADDEV 172 (518) Q Consensus 116 ~~~~i~~~~~---G~~~~l~~l~p~~v~~~~~----~~~~-------~~~~~~~~~~---------~~~~~~~~~~~~~v 172 (518) .|..++-+.+ ..+.+|..|+|..++.++. .+++ ..+|.|.... ...+..++++.+-| T Consensus 156 i~fhKiid~k~pk~GI~Elr~lDPr~i~~vr~i~~~~~~~~~vi~~~~e~f~Y~~~~~~y~~~g~~~~~~~~ikI~~dAI 235 (524) T protein:vir:10 156 IFFHKIIDPKRPKEGIKELRRLDPRQVQYVREIITETEAGTKIVKGYKEYFIYDTAHESYACDGRMYEAGTKIKIPKAAI 235 (524) T ss_pred EEEEEEeeCCCccccceeeeeeCCccceeeeeeccCCCccchhhcchhhheeeccCccccccCccccCCCcceecchhhe Confidence 9998876633 3589999999999976332 1111 1122222111 11234566666665 Q ss_pred EEeecCCCC-cccccchHHHHHHHHHHHHHHHHHHHHHHHHccCCcceeeeeCC-cCCHHHHHHHHHHHHHHhcC----c Q lcl|Aclame:pro 173 VPIRFFNPD-GLERGLSLMESLKSTIFSEDSSRNATAAMWKNAGRPNLVLRHEK-RLSPEAQQRLREQFDRAHAG----S 246 (518) Q Consensus 173 ih~~~~~~~-~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~p~gil~~~~-~~~~e~~~~~~~~~~~~~~g----~ 246 (518) .|....-.+ +...=+|-|..|...+....-++...--+==.-+.-+-|+.++- .+.+..+++..+.+-..|.. . T Consensus 236 ~y~hSGL~d~~~~~i~gyLhkAiKp~NQLkmlEDAlVIYRitRAPeRRvFYIDvGnlPk~KAeqYl~~im~k~KNklvYD 315 (524) T protein:vir:10 236 VYAHSGLVDCCGKNIIGYLHRAVKPANQLKLLEDAVVIYRITRAPDRRVWYVDTGNMPARKAAEHMQHVMNTMKNRVVYD 315 (524) T ss_pred eeeeccceeCCCCceeccchhhhHHHHhhhHHHhhHHHHhhhccccceEEEEecCCCCchhHHHHHHHHHHhcCceeEEe Confidence 554422111 11123677888887777777776654433223333344554442 23333333333333333221 1 Q ss_pred ccccc------cee-c-----c-----CCcccccccCChhhHHHHHHHHHHHHHHHHHhccchHhhccccc--cccccHH Q lcl|Aclame:pro 247 SNTGK------TMV-V-----E-----EGMEPIPLQLTAVEMQFIEARQLNREEVCGVYDIAPPIVHILDR--ATFSNIS 307 (518) Q Consensus 247 ~n~g~------~~v-l-----~-----~g~~~~~~~~~~~d~q~~e~~~~~~~~Ia~~fgVpp~~lg~~~~--~~~s~~e 307 (518) .+.|. .+- + + .|.+++.+... +.+.-++-.++..+.+.++++||.+-+..... -+.+... T Consensus 316 a~TGev~ddrk~msMlEDyWLpRReGgrgTEItTLpGg-qnlgem~DV~YF~kkLy~aLnVP~sRl~~d~~~~f~~gr~~ 394 (524) T protein:vir:10 316 ASTGKIKNQQHNMSMTEDYWLQRRDGKAVTEVDTLPGA-DNTGNMEDVRWFRQALYMALRVPLSRIPQDQQGGVMFDSGT 394 (524) T ss_pred CCCCeeccchhhhhhHhhhcccccCCCcccceeecccc-CCcChHHHHHHHHHHHHHHhCCchhhcCCCCCccccccccc Confidence 11121 111 1 1 23444444322 22333344556678899999999998832211 1211111 Q ss_pred HH---HHHHHHHHHHHHHHHHHHHHHhhh---------cch--hh---ccceeeechhhh----hccC-HHHHHHHHHHH Q lcl|Aclame:pro 308 AQ---MRAFYRDTMAIPIARIQSAMDKYV---------GQY--WV---RKNRMKFDIDDV----IQPD-WEAKSESTQKM 365 (518) Q Consensus 308 ~~---~~~~~~~~l~P~~~~ie~~ln~~l---------~~~--~~---~~~~~~fd~~~l----~~~d-~~~~~~~~~~~ 365 (518) +- ...|. .-|.-+..++...+...| ++. +. ....+.|..+.. .... ...|...+..+ T Consensus 395 EItRDEikF~-KFI~rLR~rFs~~f~~~Lk~qLilKgiit~eew~~i~~~I~~~f~~Dn~f~ElKe~Eil~~R~~~l~~~ 473 (524) T protein:vir:10 395 SITRDELTFA-KFIRELQHKFEEVFLDPLKTNLLLKGIITEDEWNDEINNIKIEFHRDSYFTELKEAEILERRINMLTMA 473 (524) T ss_pred hhhHHHHHHH-HHHHHHHHHHHHHHHHHHHHhhhhccCCCHHHHHHHhhcceEEeeecchHHHHHHHHHHHHHHHHHHHh Confidence 11 11222 223333344443333322 121 11 122333332221 1111 12233333322 Q ss_pred Hh--CCCcCHHHHHHH-HhCCCCCCccCceeeecccccccccccccCCCCCCCCCCCCcccCCCCCccCCc Q lcl|Aclame:pro 366 VN--SGVATPNEGREI-MGLPRSDDPKADELYANSALQPLGATPDGAVEGEEAPAPKRPASTPVASLDQSP 433 (518) Q Consensus 366 ~~--~g~~T~NE~R~~-~g~~pi~~~~gD~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 433 (518) -. .-.++.+=+|+. |.+.--+-..-++ . +. ..... +.-.+...+.++- T Consensus 474 dpyvGky~s~~yi~k~ILr~tDeei~~~~k-----~---I~-------~E~k~-----~~~~~~~~~~~~f 524 (524) T protein:vir:10 474 EPFIGKYISHRTAMKDILQMTDEEIEQEAK-----Q---IE-------EESKE-----ARFQDPDQEQEDF 524 (524) T ss_pred hhhhcccchhHHHHHHHhccCHHHHHHHHH-----H---HH-------HHhhc-----CCCCCCchhhhcC Confidence 11 113344444332 3332110000000 0 00 00000 0000000011111 No 262 >protein:vir:8883 Length: 543 # NCBI annotation: head-tail connector protein # Family: family:all:481 # MgeID: mge:161 # MgeName: gh-1 # Cross-refs: genbank:acc:NP_813772;genbank:gi:29366727;genbank:GeneID:1258836 Probab=21.77 E-value=2.5 Score=18.36 Aligned_cols=394 Identities=10% Similarity=0.008 Sum_probs=138.8 Q ss_pred CCCCCCCCCccccccccchhhhhhhccCccCCcccCccchhhHHHHhhhHHHHHHHHHHHHhhc-cCceEEEEecCCcee Q lcl|Aclame:pro 1 MLLANGQTLSAPAMAELSPQMQDSYYYAPAVGMQLERQFSLYGGIYKNQPWVRTVIAKRAQALA-RLPVKCMFTSGDTET 79 (518) Q Consensus 1 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~v~~ia~~ia-~lp~~v~~~~~~~~~ 79 (518) .+|.+...... . ...+.+..+.. -++......+...+. .-||.=....+.... T Consensus 42 ~~~~~~~~~~~--~-------------------~~~~~~dst~~-----~a~~~Laa~l~~~ltP~~~WF~l~~~d~~~~ 95 (543) T protein:vir:88 42 SLFPKDSDNSS--T-------------------DYTTPWQAVGA-----RGLNNLSAKVMLALFPLQSWMKLKVSEWQAK 95 (543) T ss_pred ccCCCCCCccc--c-------------------cccccccchHH-----HHHHHHHHHHHHhhcCCCcccccccChHHHh Confidence 33322110000 0 00000000000 123333333333332 113322111110000 Q ss_pred ----------eec------chHHHHHhhccCccCCHHHHHHHHHHHHHHcCCeeEEeeeCCCC----ceeeeeeeCCcce Q lcl|Aclame:pro 80 ----------EEH------DTGYAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQKNKSG----TPEKLMPMHPSRV 139 (518) Q Consensus 80 ----------~~~------~~~~~~l~~~PN~~~t~~~f~~~~~~~~ll~G~~~~~i~~~~~G----~~~~l~~l~p~~v 139 (518) +.. .+.++..+.+-| ++.=+..+..+++.+||+.+++..+... .....||+. .+ T Consensus 96 ~~~~~~~~~~~v~~~L~~ve~~~~~~~~~sn----f~~~~~~~~~~L~~~G~a~ly~~~~~~~~~~~~~~~~~pl~--~y 169 (543) T protein:vir:88 96 QLVSDPSQLAVVEQGLGMVERILMSYMEANS----YRVTLFELIRQLALAGTALIYLPPPDASSNSYNPMKLYTLH--NH 169 (543) T ss_pred cccCChhhHHHHHHHHHHHHHHHHHHHHhcC----cHHHHHHHHHHHHhhCceeeeeccCccccceecceEEeEcc--eE Confidence 000 011222223333 4444455677888999998887554321 123344442 33 Q ss_pred EEEeccCcceE----------------------------------EEEeeccCCC----------Ccee-------EEEe Q lcl|Aclame:pro 140 AIKRNSRTGRY----------------------------------EYYFQAGAGV----------GTQL-------VSFA 168 (518) Q Consensus 140 ~~~~~~~~~~~----------------------------------~~~~~~~~~~----------~~~~-------~~~~ 168 (518) .+..+..|... .|........ .+.. ..+. T Consensus 170 ~v~~d~~G~v~~i~r~~~~~~~~l~~~~~~~v~~~~~~~p~~~~~v~~~V~pr~~~~~~~~~~~~~~~~v~~~~~~~~~~ 249 (543) T protein:vir:88 170 VVQRDAFGNVLQIVTLDKVAYAALPEDVRNSLSGGQEYKPEQELEVYTHIYIDDESGDFLSYQEIEGVEVDGSDGQYPQD 249 (543) T ss_pred EEeeCCCCCeeeeeeeeeccHHHHhHHhhHHHHHHhhcCCccceEEEEEEEeecCCCcccccccccCeeeecCCCccccc Confidence 33333333211 1111100000 0000 1122 Q ss_pred eeeeEEeecCCCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHccCCcceeeeeCCcCCHHHHHHHHHHHHHHhcCccc Q lcl|Aclame:pro 169 DDEVVPIRFFNPDGLERGLSLMESLKSTIFSEDSSRNATAAMWKNAGRPNLVLRHEKRLSPEAQQRLREQFDRAHAGSSN 248 (518) Q Consensus 169 ~~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~p~gil~~~~~~~~e~~~~~~~~~~~~~~g~~n 248 (518) .-..+..|....++..||.||.+-+...+.....+.+...........|..++.-+........ ..|..+ T Consensus 250 e~P~i~~Rw~~~~ge~YGrgp~~~~l~D~k~L~~l~~~~l~~~~~~~~pp~~v~~~g~~~~~~~----------~~~~~g 319 (543) T protein:vir:88 250 ALPWIAVRWTKRDGEHYGRSHVEEYLGDLNSLESLNEAMIKFAMISSKVVGLVNPNGITQVRRL----------VKAQTG 319 (543) T ss_pred cCCceeeeeeecCCCccccchHHHHHHHHHHHHHHHHHHHHHHHHHhcCceeeccccccchhhc----------ccCCCc Confidence 2345666666667888999999999999999999999999999998888866544433333221 122111 Q ss_pred cccceeccCCcccccccCChhhHHHHHHHHHHHHHHHHHhccchHhhccccccccccHHH--HHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 249 TGKTMVVEEGMEPIPLQLTAVEMQFIEARQLNREEVCGVYDIAPPIVHILDRATFSNISA--QMRAFYRDTMAIPIARIQ 326 (518) Q Consensus 249 ~g~~~vl~~g~~~~~~~~~~~d~q~~e~~~~~~~~Ia~~fgVpp~~lg~~~~~~~s~~e~--~~~~~~~~~l~P~~~~ie 326 (518) . -+.-..+++...++...++=.-..+..+.....|-.+|-+.. +...+. ..-+.++ ....-....|.|.+.+++ T Consensus 320 ~-~v~g~~~~v~~~~~~~~~~~~~~~~~i~~~~~rI~~af~~~~--~~~~~~-~r~TAtEV~~r~~E~~~~LG~v~~rl~ 395 (543) T protein:vir:88 320 D-FVAGRKADIEFLQLEKTADFTVAKSVADAIEARLSYVFMLNS--AVQRSG-ERVTAEEIRYVASELEDTLGGVYSILS 395 (543) T ss_pred e-eecCCCCcceeeecccccchhHHHHHHHHHHHHHHHHHhhhh--hccCCC-CcccHHHHHHHHHHHHHHHhHHHHHHH Confidence 1 011122344444554433222234556666788888886652 221111 1112222 222333344555555554 Q ss_pred HHHH------------h-hhcchhh-ccceeeec--hhhhhcc-CHHHHHHHHHHHHhC-C------CcCHHHH----HH Q lcl|Aclame:pro 327 SAMD------------K-YVGQYWV-RKNRMKFD--IDDVIQP-DWEAKSESTQKMVNS-G------VATPNEG----RE 378 (518) Q Consensus 327 ~~ln------------~-~l~~~~~-~~~~~~fd--~~~l~~~-d~~~~~~~~~~~~~~-g------~~T~NE~----R~ 378 (518) ++|= + .+++... ....++|- +..+.+. +......++. .+.. + .+..+++ .+ T Consensus 396 ~E~l~Pli~r~~~il~r~g~lP~~p~~~v~~~~vs~l~~l~r~~~~~~l~~~~~-~v~~~~~p~vld~id~d~~~~~~a~ 474 (543) T protein:vir:88 396 QELQLPIVRVLLNQLQATQQIPNLPQEAVEPTVTTGAEALGRGQDLDKLTQFLN-AVATVSQLNGDPDLNVNNIKLRLAN 474 (543) T ss_pred HHHHHHHHHHHHHHHHhcCCCCCCchhceeeeEEecHHHHHHHHHHHHHHHHHH-HHHhccchhhhccCCHHHHHHHHHH Confidence 4433 2 2333222 12223332 1122111 1111111111 1110 0 0122222 22 Q ss_pred HHhCCCCCCccCceeeeccccccccccc--ccCCCC----CCCCCCCCcccCCCCCccCCccccccccChhhhcchhHHH Q lcl|Aclame:pro 379 IMGLPRSDDPKADELYANSALQPLGATP--DGAVEG----EEAPAPKRPASTPVASLDQSPPASVPGLSPTNSDRSTDSG 452 (518) Q Consensus 379 ~~g~~pi~~~~gD~~~~~~n~~~~~~~~--~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 452 (518) .+|.+|.. .+..+.....+-... ...... .......+...++..-+ .--+++.. T Consensus 475 ~~Gv~~~~-----i~r~~~e~~~~~~q~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-------------- 534 (543) T protein:vir:88 475 AIGIDTAG-----LLLTEAEKAQAQSQEMLKQGGLNAAAGIGSGVAAQATASPEAME-SAMDTAGV-------------- 534 (543) T ss_pred HhCCChhh-----hcCCHHHHHHHHHHHHHHHHHHHHHHHHhhchhhhhccChHHHH-HHhhhcCC-------------- Confidence 23443210 000000000000000 000000 00000000000000000 00000000 Q ss_pred HHHHHHHhhccCcchh Q lcl|Aclame:pro 453 KTEPRRLMQKPPPKES 468 (518) Q Consensus 453 ~~~~~~~~~k~~~~~~ 468 (518) + --|.+... T Consensus 535 ~-------~~p~~~~~ 543 (543) T protein:vir:88 535 Q-------PGPIATQV 543 (543) T ss_pred C-------CCCCCCCC Confidence 0 01111111 No 263 >protein:vir:94572 Length: 535 # NCBI annotation: Head-to-tail joining protein # Family: family:all:481 # MgeID: mge:1516 # MgeName: Berlin # Cross-refs: genbank:acc:YP_919010;genbank:gi:119637774;genbank:GeneID:5179332 Probab=21.63 E-value=2.6 Score=18.33 Aligned_cols=374 Identities=11% Similarity=0.023 Sum_probs=125.3 Q ss_pred CCCCCCCCCcccccc------------ccchhhhhhhccCccCCcccCccchhh-------HHHHhhhHHHHHHHHHHHH Q lcl|Aclame:pro 1 MLLANGQTLSAPAMA------------ELSPQMQDSYYYAPAVGMQLERQFSLY-------GGIYKNQPWVRTVIAKRAQ 61 (518) Q Consensus 1 ~~f~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~v~~~v~~ia~ 61 (518) .+|.+.......... .+..-+..... +....+.+....... .+...-..++..|-+++- T Consensus 43 ~~~~~~~~~~~~~~~~~~dst~~~a~~~Laa~l~~~lt-P~~~WF~l~~~d~~~~~~~~~~~~~~~v~~~L~~ve~~~~- 120 (535) T protein:vir:94 43 SLFPKDSDNASTDYTTPWQAVGARGLNNLASKLMLALF-PMQTWMKLTISEFEAKQLVAQPAELAKVEEGLSMVERILM- 120 (535) T ss_pred ccCCCCCCccccccCCcccccHHHHHHHHHHHHHhhhc-CCCCccccccChhhhhccccchhHHHHHHHHHHHHHHHHH- Confidence 333221111110000 00000000000 000000000000000 000001112222222221 Q ss_pred hhccCceEEEEecCCceeeecchHHHHHhhccCccCCHHHHHHHHHHHHHHcCCeeEEeeeCCC-CceeeeeeeCCcceE Q lcl|Aclame:pro 62 ALARLPVKCMFTSGDTETEEHDTGYAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQKNKS-GTPEKLMPMHPSRVA 140 (518) Q Consensus 62 ~ia~lp~~v~~~~~~~~~~~~~~~~~~l~~~PN~~~t~~~f~~~~~~~~ll~G~~~~~i~~~~~-G~~~~l~~l~p~~v~ 140 (518) ..+.+-| ++.=+..+..+++.+||+.+++..+.. +.....||+ .++. T Consensus 121 --------------------------~~~~~sn----f~~~~~~~~~~L~~~G~a~l~~~~~~~~~~~f~~~pl--~~y~ 168 (535) T protein:vir:94 121 --------------------------NYIESNS----YRVTLFETLKQLVVAGNALLYIPEPEGTYNPMKLYRL--SSYV 168 (535) T ss_pred --------------------------HHHHhcC----cHHHHHHHHHHHHhhCcEeEeeccCcCcccceEEEEc--CeEE Confidence 2222222 233334456677888998887755432 222334443 3344 Q ss_pred EEeccCcceE----------------------------------EEEeeccCCCC----------cee-------EEEee Q lcl|Aclame:pro 141 IKRNSRTGRY----------------------------------EYYFQAGAGVG----------TQL-------VSFAD 169 (518) Q Consensus 141 ~~~~~~~~~~----------------------------------~~~~~~~~~~~----------~~~-------~~~~~ 169 (518) +..+..|... .|.....+..+ +.. ..|.. T Consensus 169 v~~d~~G~vd~i~r~~~~~~~~l~~~~~~~~~~~~~~~~~~~v~v~~~v~~~~~~~~~~~~~e~~g~~~~~~~~~~g~~~ 248 (535) T protein:vir:94 169 VQRDAFGTVLQIVTLDKTAYAALPEDVRNSMDSSQEHKGDEMIDVYTHIYLDEESGEYLKYEEIDGVEVEGTDASYPVDA 248 (535) T ss_pred EeeCCCCCeEEEEeeeeccHHHhhHHHHHHHHhccccCCCceeEEEEEEEeeCCCCcEEEEEEecCeeeccccccCcccc Confidence 4444333221 11100000000 000 01222 Q ss_pred eeeEEeecCCCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHccCCcceeeeeCCcCCHHHHHHHHHHHHHHhcCcccc Q lcl|Aclame:pro 170 DEVVPIRFFNPDGLERGLSLMESLKSTIFSEDSSRNATAAMWKNAGRPNLVLRHEKRLSPEAQQRLREQFDRAHAGSSNT 249 (518) Q Consensus 170 ~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~p~gil~~~~~~~~e~~~~~~~~~~~~~~g~~n~ 249 (518) ...+..|....+|..||.||.+-+...+.....+.+.......-...|...+.-++...+..+ . .+ .+. T Consensus 249 ~P~~~~Rw~~~~ge~YGrgp~~~~l~D~k~L~~l~~~~l~~~~~a~~~~~lv~p~g~~~~~~~-------~---~~-~~g 317 (535) T protein:vir:94 249 CPYIPVRMVRIDGESYGRSYCEEYLGDLRSLENLQEAIVKMSMISAKVIGLVNPAGITQVRRL-------T---KA-QTG 317 (535) T ss_pred CCceeeeeeecCCCccccchHHHHHHHHHHHHHHHHHHHHHHHHhccCCcccccccccchhhc-------c---cC-CCc Confidence 345566666667788999999999999999998888887777776666554443232222211 1 11 110 Q ss_pred ccceeccCCcccccccCChhhHH-HHHHHHHHHHHHHHHhccchHhhccccccccccHHH--HHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 250 GKTMVVEEGMEPIPLQLTAVEMQ-FIEARQLNREEVCGVYDIAPPIVHILDRATFSNISA--QMRAFYRDTMAIPIARIQ 326 (518) Q Consensus 250 g~~~vl~~g~~~~~~~~~~~d~q-~~e~~~~~~~~Ia~~fgVpp~~lg~~~~~~~s~~e~--~~~~~~~~~l~P~~~~ie 326 (518) .-+....+++...++...+ +.+ ..+..+.....|-.+|=+.. +..-+... -+.++ ....-....|.|.+.+++ T Consensus 318 ~~v~g~~~~v~~~~~~~~~-~~~~~~~~i~~~~~rI~~af~~~~--~~~~d~~r-vTAtEV~~r~~E~~~~LGpv~~rl~ 393 (535) T protein:vir:94 318 DFVSGRPEDISFLQLEKAA-DFSVARAVSEQIEGRLSYAFMLNS--AVQRTGER-VTAEEIRYVASELEDTLGGVYSILS 393 (535) T ss_pred eeecCCcccceeeeccccc-chhHHHHHHHHHHHHHHHHHhHhh--hccCCCCC-ccHHHHHHHHHHHHHHhhhHHHHHH Confidence 0111122334444444332 333 24455666778888883321 21111111 12222 222333334444444444 Q ss_pred HHHH------------h-hhcchhh-ccceeeechhhhh----ccCHHHHHHHHHHHHhCC------CcCHHH----HHH Q lcl|Aclame:pro 327 SAMD------------K-YVGQYWV-RKNRMKFDIDDVI----QPDWEAKSESTQKMVNSG------VATPNE----GRE 378 (518) Q Consensus 327 ~~ln------------~-~l~~~~~-~~~~~~fd~~~l~----~~d~~~~~~~~~~~~~~g------~~T~NE----~R~ 378 (518) .+|= + .+++... ....++| .+.+- ..+.+....++..+-..+ .+..++ +-+ T Consensus 394 ~ElL~Pli~r~~~il~r~g~lP~~p~~~v~~~~-vs~la~l~r~~~~~~l~~~~~~laq~~P~~ld~~id~d~~~~~~a~ 472 (535) T protein:vir:94 394 QELQLPMVRVLLKQLQATNQIPELPKEAVEPTI-STGMEALGRGQDLDKLERCIAAWSALAPMQGDPDINIATIKLRIAN 472 (535) T ss_pred HHHHHHHHHHHHHHHHhCCCCCCCChhhccceE-eehHHHHHHHHHHHHHHHHHHHHHhhChHHhhhcCCHHHHHHHHHH Confidence 4432 2 2333221 1122222 11110 111122222222111110 112222 122 Q ss_pred HHhCCCCC---C-ccCceeeec--------ccccccccccccCCC----C-CCCCCCCCcccC Q lcl|Aclame:pro 379 IMGLPRSD---D-PKADELYAN--------SALQPLGATPDGAVE----G-EEAPAPKRPAST 424 (518) Q Consensus 379 ~~g~~pi~---~-~~gD~~~~~--------~n~~~~~~~~~~~~~----~-~~~~~~~~~~~~ 424 (518) .+|.|+.. . +.-...... ..+...+....+... . +..+..-....+ T Consensus 473 ~~Gvp~~~i~rs~eev~~~~~q~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~~~~ 535 (535) T protein:vir:94 473 AIGIDTSGILKTPEEKQQEMAEAAQGTAMQNAAASAGAGAGTMATASPENMKAAAAQAGMAPN 535 (535) T ss_pred HhCCChhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccChHHHHHHHHHhccCCC Confidence 33433210 0 000000000 000000000000000 0 000011111111 No 264 >protein:vir:1785 Length: 555 # NCBI annotation: head-tail connector protein # Family: family:all:481 # MgeID: mge:38 # MgeName: P60 # Cross-refs: genbank:acc:NP_570351;genbank:gi:18640510;genbank:GeneID:932723 Probab=21.26 E-value=2.6 Score=18.28 Aligned_cols=386 Identities=12% Similarity=0.111 Sum_probs=138.3 Q ss_pred CCCCCCCCCccccccccchhhhhhhccCccCCcccCccchhhHHHHhhhHHHHHHHHHHHHhhc--cCceEEEEecCCc- Q lcl|Aclame:pro 1 MLLANGQTLSAPAMAELSPQMQDSYYYAPAVGMQLERQFSLYGGIYKNQPWVRTVIAKRAQALA--RLPVKCMFTSGDT- 77 (518) Q Consensus 1 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~v~~ia~~ia--~lp~~v~~~~~~~- 77 (518) ++|........ . .....+..+. .-++......+...+- +-||.=....+.. T Consensus 33 ~~~~~~~~~~~--~-------------------~~~~~~dst~-----~~a~~~Laa~l~~~ltpp~~~WF~l~~~d~~~ 86 (555) T protein:vir:17 33 YILTDEGHVQG--G-------------------YLPTPWQSVG-----SKGVNVLASKLMLSLFPVNTSFFKLQINDAEI 86 (555) T ss_pred cccCCCCCccc--c-------------------cccccccccH-----HHHHHHHHHHHHHhhcCCCCcccccccCHHHH Confidence 43322111000 0 0000000000 0134444444444442 3455322211100 Q ss_pred ee-----e----ec------chHHHHHhhccCccCCHHHHHHHHHHHHHHcCCeeEEeeeCCCCceeeeeeeCCcceEEE Q lcl|Aclame:pro 78 ET-----E----EH------DTGYAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQKNKSGTPEKLMPMHPSRVAIK 142 (518) Q Consensus 78 ~~-----~----~~------~~~~~~l~~~PN~~~t~~~f~~~~~~~~ll~G~~~~~i~~~~~G~~~~l~~l~p~~v~~~ 142 (518) .. . .. ...++..+.+- +++.=+..+..+++.+||+.+++..+ +...||+. ++.+. T Consensus 87 ~~~~~~~~~~~~v~~~l~~ve~~~~~~l~~s----nf~~~~~~~~~~L~~~G~a~ly~~~~----~~~~~pl~--~y~v~ 156 (555) T protein:vir:17 87 DNLGMDEQARSEIDLSLSRIERIVTQDIAES----SDRVHLEMAMKHLIVTGNALLYQGKK----NLKLYPLD--RFVVS 156 (555) T ss_pred hhccCCHHHHHHHHHHHHHHHHHHHHHHHhc----CcHHHHHHHHHHHHhHCeEEEEecCC----ceeEEEcC--eEEEe Confidence 00 0 00 01112222223 34444555677888999998776332 23455553 34444 Q ss_pred eccCcceEE-EE-------------------------------------------------------------------e Q lcl|Aclame:pro 143 RNSRTGRYE-YY-------------------------------------------------------------------F 154 (518) Q Consensus 143 ~~~~~~~~~-~~-------------------------------------------------------------------~ 154 (518) .|..|.... |+ . T Consensus 157 ~d~~G~vd~v~rk~~~t~~ql~~~fg~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~v~t~~~~~~~~~~~~~ 236 (555) T protein:vir:17 157 RDGEGNVMEIVTEEQIDRSLLPEEFQKVGGLEGAPDSNAVGEDGPKMGVTAPGGRDKGKSNDALVYTYVCRKDGQVKWHQ 236 (555) T ss_pred eCCCcCeeEEEeeeeecHHHHHHHhhhccccchhhhhhhccccchhhhhhhhcccccCCCcceeEeecccccCCeeEEEE Confidence 444442211 10 0 Q ss_pred eccCCCC-c--eeEEEeeeeeEEeecCCCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHccCCcceeeeeCCcCCHHH Q lcl|Aclame:pro 155 QAGAGVG-T--QLVSFADDEVVPIRFFNPDGLERGLSLMESLKSTIFSEDSSRNATAAMWKNAGRPNLVLRHEKRLSPEA 231 (518) Q Consensus 155 ~~~~~~~-~--~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~p~gil~~~~~~~~e~ 231 (518) ...+... + ....|....++..|....++..||.||.+-+...+.....+.+.......-...|..++.-+....+.. T Consensus 237 e~~~~~v~~~l~e~g~~e~P~i~~Rw~~~~ge~YGrgp~~~~l~D~k~L~~l~~~~l~~~~~~~~pp~lv~~~g~~~~~~ 316 (555) T protein:vir:17 237 ECDGKVIPGSNSSAPYTHNPWIPLRFNIVDGEAYGRGRVEEFMGDLKSLEALSQAMVEGSAASAKVVFMVSPSATTKPQN 316 (555) T ss_pred ecCceeccccccccCcccCCeeeeeeeecCCCccccchHHHHHHHHHHHHHHHHHHHHHHHHHhCCceeeccccccCcce Confidence 0000000 0 000112223466666666788999999999999999999999999998888888887665443333322 Q ss_pred HHHHHHHHHHHhcCccccccceeccCCcccccccC-ChhhHHH-HHHHHHHHHHHHHHhccchHhhccccccccccHHH- Q lcl|Aclame:pro 232 QQRLREQFDRAHAGSSNTGKTMVVEEGMEPIPLQL-TAVEMQF-IEARQLNREEVCGVYDIAPPIVHILDRATFSNISA- 308 (518) Q Consensus 232 ~~~~~~~~~~~~~g~~n~g~~~vl~~g~~~~~~~~-~~~d~q~-~e~~~~~~~~Ia~~fgVpp~~lg~~~~~~~s~~e~- 308 (518) . ..|. .+.++....-.+.++.. ++.+.+. .+..+.....|-.+|-+ ++..+. ..-+.++ T Consensus 317 l----------~~~~---~g~v~~g~~~~v~~~~~~~~~~~~~~~~~i~~~~~~I~~aFm~----~~~~d~-~r~TAtEV 378 (555) T protein:vir:17 317 L----------ALAA---NGAIIQGRPDDVSVVQANKAADFRTVLEMIQKLEQRISDAFLM----LQVRQS-ERTTATEV 378 (555) T ss_pred e----------ecCC---CceeecCCcccceeeeccccchhhHHHHHHHHHHHHHHHHHhh----cCCCCc-ccchHHHH Confidence 1 1111 12222222222333322 2334442 33444455667777744 222121 1112222 Q ss_pred -HHHHHHHHHHHHHHHHHHHH------------HHhh-hcchhhcc-ceeee--chhhhh-ccCHHHHHHHHHHHHhCC- Q lcl|Aclame:pro 309 -QMRAFYRDTMAIPIARIQSA------------MDKY-VGQYWVRK-NRMKF--DIDDVI-QPDWEAKSESTQKMVNSG- 369 (518) Q Consensus 309 -~~~~~~~~~l~P~~~~ie~~------------ln~~-l~~~~~~~-~~~~f--d~~~l~-~~d~~~~~~~~~~~~~~g- 369 (518) ....-....|.|.+.++..+ +.+. ++|..... ....+ -+..+. ..+.+....++..+...+ T Consensus 379 ~~r~~E~~~~LGpv~~rl~~E~L~Pli~R~~~il~r~g~lP~~p~~~v~~~i~~~l~~l~r~~~~~~l~~~~~~laq~~~ 458 (555) T protein:vir:17 379 QATVQELNEQIGGIYSNLTTELLQPYLARKLHLLQKQRKLPQLPKDLVQPTVVAGLWGVGRGQDKQQLMEFITTLAQTMG 458 (555) T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCHhhhccceeehHHHHHHHHHHHHHHHHHHHHHhhcC Confidence 12223333444444444433 3322 34332211 11111 112221 122233333333332221 Q ss_pred ------CcCHHH----HHHHHhCCCCCCccCceeeeccccccccc--------------cc--ccCCCCCCCCCCCCccc Q lcl|Aclame:pro 370 ------VATPNE----GREIMGLPRSDDPKADELYANSALQPLGA--------------TP--DGAVEGEEAPAPKRPAS 423 (518) Q Consensus 370 ------~~T~NE----~R~~~g~~pi~~~~gD~~~~~~n~~~~~~--------------~~--~~~~~~~~~~~~~~~~~ 423 (518) .+..++ +-+.+|.+|.. .+..+-....+-+ .. .+....+++. +... T Consensus 459 ~p~~~d~id~d~~~~~~a~~~Gv~p~~-----ivrs~eev~~~rq~~~~~~~q~~~~~qa~~~~~~~~~~~~~---~~~~ 530 (555) T protein:vir:17 459 PEIAMKYINPTEFIKRLAAAQGIDTLQ-----LINSPETMKQLGDQQKQDMVQASLINQAGQLAKTPMAEQAM---QLIQ 530 (555) T ss_pred chhHhhcCCHHHHHHHHHHHcCCChhh-----hcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHH---hccc Confidence 122222 22334444431 0000000000000 00 0000000000 0000 Q ss_pred CCCCCccCCccccccccChhhhcchh Q lcl|Aclame:pro 424 TPVASLDQSPPASVPGLSPTNSDRST 449 (518) Q Consensus 424 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 449 (518) ...........+.....++... .+. T Consensus 531 ~~~~~a~~~~~a~~~~~~~~~~-~~~ 555 (555) T protein:vir:17 531 QQQEGAQDAGAAESETSSAEAQ-AGA 555 (555) T ss_pred cchhhhhHHHHHHhhcCCcccc-cCC Confidence 0000000000000000000000 000 No 265 >protein:vir:2198 Length: 536 # NCBI annotation: head-tail connector protein # Family: family:all:481 # MgeID: mge:49 # MgeName: T7 # Cross-refs: genbank:acc:NP_041995;swissprot:sw:p03728;genbank:gi:9627467;goa:P03728;uniprot:P03728;genbank:GeneID:1261033 Probab=20.76 E-value=2.7 Score=18.21 Aligned_cols=406 Identities=9% Similarity=0.019 Sum_probs=129.8 Q ss_pred CCCCCCCCCccccc------------cccchhhhhhhccCccCCcccCc--cchhhHH---HHhhhHHHHHHHHHHHHhh Q lcl|Aclame:pro 1 MLLANGQTLSAPAM------------AELSPQMQDSYYYAPAVGMQLER--QFSLYGG---IYKNQPWVRTVIAKRAQAL 63 (518) Q Consensus 1 ~~f~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~---~~~~~~~v~~~v~~ia~~i 63 (518) .+|........... ..+..-+.+... |. +.+..- ....... .-.....|..-.+.+. T Consensus 41 ~~~~~~~~~~~~~~~~~~dst~~~a~~~Laa~l~~~lt--P~-~~WFrl~~~d~~~~~~~~~~~~~~~v~~~L~~ve--- 114 (536) T protein:vir:21 41 SLFPKDSDNASTDYQTPWQAVGARGLNNLASKLMLALF--PM-QTWMRLTISEYEAKQLLSDPDGLAKVDEGLSMVE--- 114 (536) T ss_pred cccCCCCCcccccccccccccHHHHHHHHHHHHHHhhc--CC-CcccccccChhhhhccccchhhHHHHHHHHHHHH--- Confidence 44433211111000 000000000000 10 001000 0000000 0000011111111111 Q ss_pred ccCceEEEEecCCceeeecchHHHHHhhccCccCCHHHHHHHHHHHHHHcCCeeEEeeeCCCCcee--eeeeeCCcceEE Q lcl|Aclame:pro 64 ARLPVKCMFTSGDTETEEHDTGYAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQKNKSGTPE--KLMPMHPSRVAI 141 (518) Q Consensus 64 a~lp~~v~~~~~~~~~~~~~~~~~~l~~~PN~~~t~~~f~~~~~~~~ll~G~~~~~i~~~~~G~~~--~l~~l~p~~v~~ 141 (518) +.++..+.+-| ++.=+.....+++.+||+.+++..+..+.+. ..||+ .++.+ T Consensus 115 --------------------~~~~~~l~~sn----f~~~~~~~~~~L~~~G~a~ly~~e~~~~~~~~f~~~pl--~~~~v 168 (536) T protein:vir:21 115 --------------------RIIMNYIESNS----YRVTLFEALKQLVVAGNVLLYLPEPEGSNYNPMKLYRL--SSYVV 168 (536) T ss_pred --------------------HHHHHHHHhcC----cHHHHHHHHHHHHhHCcEeEEEeeCCCCceeeEEEEEc--CeEEE Confidence 11222233333 3333445577888899999888666544333 34444 45555 Q ss_pred EeccCcceE-----------------------------------EEEeeccCCCC----------ce-------eEEEee Q lcl|Aclame:pro 142 KRNSRTGRY-----------------------------------EYYFQAGAGVG----------TQ-------LVSFAD 169 (518) Q Consensus 142 ~~~~~~~~~-----------------------------------~~~~~~~~~~~----------~~-------~~~~~~ 169 (518) ..+..|... .|........+ +. ...|.. T Consensus 169 ~~d~~G~vd~i~r~~~~t~~~l~~~fg~~~~~~~~~~~~~~~v~v~~~v~~~~~~~~~~~~~e~~g~~v~~~~g~~~f~~ 248 (536) T protein:vir:21 169 QRDAFGNVLQMVTRDQIAFGALPEDIRKAVEGQGGEKKADETIDVYTHIYLDEDSGEYLRYEEVEGMEVQGSDGTYPKEA 248 (536) T ss_pred eeCCCCCeeEEeeeeeccHHHHHHhhhhhhcccccccccccceeEEEEEEEecCCCcEEEEeccCCeeeccccCcccccc Confidence 555444221 11110000000 00 001222 Q ss_pred eeeEEeecCCCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHccCCcceeeeeCCcCCHHHHHHHHHHHHHHhcCcccc Q lcl|Aclame:pro 170 DEVVPIRFFNPDGLERGLSLMESLKSTIFSEDSSRNATAAMWKNAGRPNLVLRHEKRLSPEAQQRLREQFDRAHAGSSNT 249 (518) Q Consensus 170 ~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~p~gil~~~~~~~~e~~~~~~~~~~~~~~g~~n~ 249 (518) ...+.+|....++..||.||.+-+...+.....+.+.......-...|...+.-+....+... ..+.. T Consensus 249 ~P~i~~Rw~~~~ge~YGrgp~~~~l~D~k~L~~l~~~~l~~~~~a~~~~~lv~p~g~~~~~~~----------~~~~~-- 316 (536) T protein:vir:21 249 CPYIPIRMVRLDGESYGRSYIEEYLGDLRSLENLQEAIVKMSMISSKVIGLVNPAGITQPRRL----------TKAQT-- 316 (536) T ss_pred CCeeeeeeeecCCCccccchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccCcccccchhhh----------ccCCC-- Confidence 344566666667788999999999999999998888887766666666544432222222211 11111 Q ss_pred ccc-eeccCCcccccccCChhhHH-HHHHHHHHHHHHHHHhccchHhhccccccccccHHH--HHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 250 GKT-MVVEEGMEPIPLQLTAVEMQ-FIEARQLNREEVCGVYDIAPPIVHILDRATFSNISA--QMRAFYRDTMAIPIARI 325 (518) Q Consensus 250 g~~-~vl~~g~~~~~~~~~~~d~q-~~e~~~~~~~~Ia~~fgVpp~~lg~~~~~~~s~~e~--~~~~~~~~~l~P~~~~i 325 (518) |.+ .-..+.+...++... .+.+ ..+..+.....|-.+|-+.. +..-+. ..-+.++ ....-....|.|.+.++ T Consensus 317 g~~v~g~~~~v~~~~~~~~-~~~~~~~~~i~~~~~rI~~af~~~~--l~~~~~-~r~TAtEV~~r~~E~~~~LG~v~~rl 392 (536) T protein:vir:21 317 GDFVTGRPEDISFLQLEKQ-ADFTVAKAVSDAIEARLSFAFMLNS--AVQRTG-ERVTAEEIRYVASELEDTLGGVYSIL 392 (536) T ss_pred cceecCCcccceeeecccc-ccchHHHHHHHHHHHHHHHHHhhhh--cccCCC-CCccHHHHHHHHHHHHHHhhHHHHHH Confidence 111 112233334444332 2232 24455666778888885542 211111 1112222 22233334455555555 Q ss_pred HHHHHhh-------------hcchhhc-cceeeechhhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHHhCCCCCCccCc Q lcl|Aclame:pro 326 QSAMDKY-------------VGQYWVR-KNRMKFDIDDVIQPDWEAKSESTQKMVNSGVATPNEGREIMGLPRSDDPKAD 391 (518) Q Consensus 326 e~~ln~~-------------l~~~~~~-~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~T~NE~R~~~g~~pi~~~~gD 391 (518) .++|=.. +++.... ...++|. +.+ ....+...+..+..- .+ ...++.|. -.| T Consensus 393 ~~Ell~Pli~r~~~il~r~g~lP~~p~~~v~~~~v-s~l---~~l~r~~~~~~l~~~----~~---~la~~~Pe---~ld 458 (536) T protein:vir:21 393 SQELQLPLVRVLLKQLQATQQIPELPKEAVEPTIS-TGL---EAIGRGQDLDKLERC----VT---AWAALAPM---RDD 458 (536) T ss_pred HHHHHHHHHHHHHHHHHhCCCCCCCChhhccceEE-ecH---HHHHHHHHHHHHHHH----HH---HHHhhchh---hhc Confidence 4444322 3332211 1122221 111 111122222211110 00 00111110 011 Q ss_pred eeeecccccccccccccCCCCCCCCCCCCcccCCCCCccCCccccccccChhhhcchhHHHHHHHHHHhhccCcchhHHH Q lcl|Aclame:pro 392 ELYANSALQPLGATPDGAVEGEEAPAPKRPASTPVASLDQSPPASVPGLSPTNSDRSTDSGKTEPRRLMQKPPPKESSPK 471 (518) Q Consensus 392 ~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ 471 (518) ..+ | .+...... ++.-+..+..--++.++-+.........+.....+.. T Consensus 459 ~~i---d---~d~~~~~~-------------------------a~~~Gv~p~~~irt~eev~~~r~q~~~~~~~~~~a~~ 507 (536) T protein:vir:21 459 PDI---N---LAMIKLRI-------------------------ANAIGIDTSGILLTEEQKQQKMAQQSMQMGMDNGAAA 507 (536) T ss_pred ccC---C---HHHHHHHH-------------------------HHHcCCChhhhcCCHHHHHHHHHHHHHHHHHHHHHHH Confidence 100 0 00000000 0000000000000111100000000000000000000 Q ss_pred HH-HHHHHHhhhhhhhcccccchhhhhhhHHHHHHHHHHHHh Q lcl|Aclame:pro 472 HL-RAVKGAMGRGKDIKGFALQLAEKYPDDLEDILLAVQLAL 512 (518) Q Consensus 472 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 512 (518) -. .....+.......++..-+.| .+++. T Consensus 508 ~~~~~~~~~~~~~~~~~~~~~~~g-------------~~~~~ 536 (536) T protein:vir:21 508 LAQGMAAQATASPEAMAAAADSVG-------------LQPGI 536 (536) T ss_pred HHHHHHHHHhcChhhHHhhhhccc-------------cCCCC Confidence 00 000011111111111111111 01111 No 266 >protein:vir:80211 Length: 514 # NCBI annotation: putative head-tail connector protein # Family: family:all:481 # MgeID: mge:1879 # MgeName: LKA1 # Cross-refs: genbank:acc:YP_001522882;genbank:gi:158345175;genbank:GeneID:5687474 Probab=20.14 E-value=2.8 Score=18.11 Aligned_cols=392 Identities=9% Similarity=-0.004 Sum_probs=123.8 Q ss_pred CCCCCCCCCccccccccchhhhhhhccCccCCcccCccchhhHHHHhhhHHHHHHHHHHHHhh--ccCceEEEEecCCce Q lcl|Aclame:pro 1 MLLANGQTLSAPAMAELSPQMQDSYYYAPAVGMQLERQFSLYGGIYKNQPWVRTVIAKRAQAL--ARLPVKCMFTSGDTE 78 (518) Q Consensus 1 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~v~~ia~~i--a~lp~~v~~~~~~~~ 78 (518) .+|........ .+....+.+..... -.+..-...+...+ .+-||.=...++... T Consensus 31 ~~~~~~~~~~~-------------------~~~~~~~~~dstg~-----~a~~~LAa~l~~~ltpp~~~WF~l~~~d~~~ 86 (514) T protein:vir:80 31 SLMVDPLDKTH-------------------QAEVVEYDFQSAGA-----FLVNNLTAKLALTLFPPGRPSFQIELDDTLQ 86 (514) T ss_pred cccCCCCCCcc-------------------cccccccccchhHH-----HHHHHHHHHHHhhhcCCCCcccccccCchhh Confidence 22211111000 00011111111110 12222222232233 234554222221100 Q ss_pred ee-----ec----ch-------HHHHHhhccCccCCHHHHHHHHHHHHHHcCCeeEEeeeCCCCceeeeeeeCCcceEEE Q lcl|Aclame:pro 79 TE-----EH----DT-------GYAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQKNKSGTPEKLMPMHPSRVAIK 142 (518) Q Consensus 79 ~~-----~~----~~-------~~~~l~~~PN~~~t~~~f~~~~~~~~ll~G~~~~~i~~~~~G~~~~l~~l~p~~v~~~ 142 (518) .. .+ .. .++..+.+ -+++.-+..+..+++.+|++.+++..+ .+ ....||+ .++.+. T Consensus 87 ~~~~~~~~~~~~v~~~L~~ve~~~~~~l~~----snf~~~~~~~~~~L~~~G~a~l~~~~~-~~-~~~~~pl--~~y~v~ 158 (514) T protein:vir:80 87 ELAAANGIDQSELHSRTADLERRATRRLFV----NASLSKLHRILKLLVVTGNALFYREPG-TG-KMLVWTM--QSYTVR 158 (514) T ss_pred hhccccchhHHHHHHHHHHHHHHHHHHHHh----cCcHHHHHHHHHHHHhHCeEEEEEecC-CC-cEEEEEc--CeEEEe Confidence 00 00 01 11222222 234444566677888999998876432 22 2344554 334444 Q ss_pred eccCcceE-----------------------------------EEEeeccCCC-C-----------cee------EEEee Q lcl|Aclame:pro 143 RNSRTGRY-----------------------------------EYYFQAGAGV-G-----------TQL------VSFAD 169 (518) Q Consensus 143 ~~~~~~~~-----------------------------------~~~~~~~~~~-~-----------~~~------~~~~~ 169 (518) .|..|... .|........ + +.. +.+.. T Consensus 159 ~d~~G~v~~i~rr~~~~~~~l~~~~~~~~~~~~~~~~~~~~v~v~~~v~~~~~~~~~~~sv~~e~~g~~i~~es~y~~~e 238 (514) T protein:vir:80 159 RTSHGDPAVVVLRQQMPFRELTPEIQADAQAKQIAKRDSDKCDLYTVIEWQPTPNGKRCAVWHELEGKRVGPESSYPAHL 238 (514) T ss_pred eCCCcCeEEEEeeeeecHHHhhhhhhhhhhhhhccCCCCCceEEEEEEEeecCCCCeEEEEEEeccceeecccCcccccc Confidence 44333221 0000000000 0 000 00111 Q ss_pred eeeEEeecCCCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHccCCcceeeeeCCcCCHHHHHHHHHHHHHHhcCcccc Q lcl|Aclame:pro 170 DEVVPIRFFNPDGLERGLSLMESLKSTIFSEDSSRNATAAMWKNAGRPNLVLRHEKRLSPEAQQRLREQFDRAHAGSSNT 249 (518) Q Consensus 170 ~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~p~gil~~~~~~~~e~~~~~~~~~~~~~~g~~n~ 249 (518) ...+-.|....+|..||.||.+-+...+.....+.+.......-...|.+.+.-.....+... . .+.. T Consensus 239 ~P~i~~Rw~~~~ge~YGrgp~~~al~D~k~L~~l~~~~l~~~~~a~~~~~~v~~~g~~~~~~l-------~---~~~~-- 306 (514) T protein:vir:80 239 CPYVPVAWNVPDGEHYGRGYVEEYSGDFARLSILSERLGLYEFEALSLLNLVDEAKGGAVDDY-------R---DAET-- 306 (514) T ss_pred CCeeeeeeEecCCCCcccchHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceeCcccccchhhh-------c---ccCC-- Confidence 223444555556778999999999999999999988888887777777654433332222211 1 1111 Q ss_pred ccceec--cCCcccccccCChhhHHH-HHHHHHHHHHHHHHhccchHhhccccccccccHHH--HHHHHHHHHHHHHHHH Q lcl|Aclame:pro 250 GKTMVV--EEGMEPIPLQLTAVEMQF-IEARQLNREEVCGVYDIAPPIVHILDRATFSNISA--QMRAFYRDTMAIPIAR 324 (518) Q Consensus 250 g~~~vl--~~g~~~~~~~~~~~d~q~-~e~~~~~~~~Ia~~fgVpp~~lg~~~~~~~s~~e~--~~~~~~~~~l~P~~~~ 324 (518) +.++- .+++...+++. ..+.+. .+..+.....|-.+|=+. .....+..-+.++ ....-....|.|.+.+ T Consensus 307 -g~~v~g~~~~v~~~~~~~-~~d~~~~~~~i~~~~~rI~~aFml~----~~~rd~~rvTAtEV~~r~~E~~~~LGpv~~r 380 (514) T protein:vir:80 307 -GDFVPGQVGSVASYERGD-YNKIAQASASVESIVMRLNRAFMYT----GQVRDAERVTVEEIRTVAEEAENLLGGVYSL 380 (514) T ss_pred -ceeecCCCccceeeecCc-ccchHHHHHHHHHHHHHHHHHHhhh----ccCCCCCCCCHHHHHHHHHHHHHHhhHHHHH Confidence 11221 12333333332 234442 355566677787777321 1111111112222 2223333344555555 Q ss_pred HHHHHHhh---------------hcchhhc-cceeeechhhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHHhCCCCCCc Q lcl|Aclame:pro 325 IQSAMDKY---------------VGQYWVR-KNRMKFDIDDVIQPDWEAKSESTQKMVNSGVATPNEGREIMGLPRSDDP 388 (518) Q Consensus 325 ie~~ln~~---------------l~~~~~~-~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~T~NE~R~~~g~~pi~~~ 388 (518) +..+|=.- .++.... ...+++- +.+...-.....+.+...+ .-+=...+..| . T Consensus 381 l~~Ell~Pli~r~~~il~r~~~g~lP~~p~~l~~~~~v-s~la~l~r~~~~~~l~~~~-------~~i~~l~~~~p---~ 449 (514) T protein:vir:80 381 LAETLQAPLAYLTMYEASRGNGGMLLGIAQGVYRPSII-TGIPALTRNIETANILRAT-------QEASAIVPALV---Q 449 (514) T ss_pred HHHHHHHHHHHHHHHHHhhhccCCCCCCCchhhcceee-ecHHHHHHHHHHHHHHHHH-------HHHHHHhccch---h Confidence 44443222 2222111 1122221 1110000000011111000 00100111111 0 Q ss_pred cCceeeecccccccccccccCCCCCCCCCCCCcccCCCCCccCCccccccccChhhhcchhHHHHHHHHHHhhccCcchh Q lcl|Aclame:pro 389 KADELYANSALQPLGATPDGAVEGEEAPAPKRPASTPVASLDQSPPASVPGLSPTNSDRSTDSGKTEPRRLMQKPPPKES 468 (518) Q Consensus 389 ~gD~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~ 468 (518) -.|.+ | .+........ ..+-|...-..+.++. ..+ .++.+.......+-..+.-. T Consensus 450 v~d~i----d---~d~~~~~~a~-----~~Gvp~~~i~~~~e~~--------~~~-----~~~~~~~~~~~~~~~~~~~~ 504 (514) T protein:vir:80 450 LSKRF----D---PEKLVERIFA-----NNSVDLSTLSKDPDVV--------AAE-----AEQEAALAQQQLDVASGALA 504 (514) T ss_pred hhhcC----C---HHHHHHHHHH-----HhCCCHhhccCCHHHH--------HHH-----HHHHHHHHHHHHHHHHHHHH Confidence 00110 0 0000000000 0000000000000000 000 00000000000000000000 Q ss_pred HHHHHHHHHH Q lcl|Aclame:pro 469 SPKHLRAVKG 478 (518) Q Consensus 469 ~~~~~~~~~~ 478 (518) ....+....+ T Consensus 505 ~~~~~~~~~~ 514 (514) T protein:vir:80 505 AETSAGVLTS 514 (514) T ss_pred HhhhccccCC Confidence 0000011111 Done!