Query lcl|Aclame:protein:vir:9821|NCBI_annot:hypothetical protein|genbank:acc:NP_795583;genbank:gi:28876338;genbank:GeneID:1257921 Match_columns 138 No_of_seqs 61 out of 65 Neff 5.7 Searched_HMMs 1612 Date Sat Nov 30 10:21:00 2013 Command /home/guerois/workspace/virfam/python/lib/hhsearch//hhsearch2 -i .//seq/seq_43 -d /home/guerois/workspace/virfam/python/profile_database/capsid_neck_tail.hhm -glob -cpu 7 -o .//seq/HHR/seq_43_vs_rec_db.hhr No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM 1 protein:vir:9821 Length: 138 # 100.0 1.7E-60 1E-63 348.3 12.4 138 1-138 1-138 (138) 2 protein:vir:4788 Length: 130 # 100.0 8.2E-52 5.1E-55 300.7 12.0 128 6-138 1-130 (130) 3 protein:vir:98900 Length: 132 100.0 1.2E-46 7.5E-50 272.3 11.9 129 6-137 1-132 (132) 4 protein:vir:43 Length: 131 # N 100.0 6.8E-45 4.2E-48 262.7 11.0 128 6-137 1-131 (131) 5 protein:vir:80967 Length: 131 100.0 1.1E-44 6.7E-48 261.6 11.1 128 6-137 1-131 (131) 6 protein:vir:79701 Length: 144 100.0 1.2E-44 7.3E-48 261.4 11.2 129 5-137 1-144 (144) 7 protein:vir:3034 Length: 111 # 100.0 1.4E-43 8.7E-47 255.5 7.8 111 28-138 1-111 (111) 8 protein:vir:78916 Length: 117 98.1 2.4E-08 1.5E-11 62.4 6.7 115 5-137 1-117 (117) 9 protein:vir:94955 Length: 170 97.3 3.5E-06 2.2E-09 50.5 8.8 119 3-133 1-170 (170) 10 protein:vir:80389 Length: 172 97.3 7.8E-06 4.8E-09 48.6 9.9 131 1-133 1-172 (172) 11 protein:vir:95176 Length: 172 97.0 1.1E-05 6.9E-09 47.7 8.3 127 1-138 3-171 (172) 12 protein:vir:97267 Length: 172 96.8 3.8E-05 2.4E-08 44.8 10.0 130 1-138 1-171 (172) 13 protein:vir:95004 Length: 169 96.7 2.3E-05 1.4E-08 46.0 8.3 124 1-133 1-169 (169) 14 protein:vir:78383 Length: 169 95.7 0.00019 1.2E-07 41.0 8.3 124 1-133 1-169 (169) 15 protein:vir:9761 Length: 140 # 92.3 0.003 1.8E-06 34.4 7.7 121 3-138 1-130 (140) 16 protein:vir:9576 Length: 131 # 89.2 0.013 8.3E-06 30.9 8.3 124 3-138 1-130 (131) 17 protein:vir:1640 Length: 132 # 86.0 0.026 1.6E-05 29.2 7.9 124 3-138 1-131 (132) 18 protein:vir:94761 Length: 132 84.3 0.053 3.3E-05 27.6 8.8 124 3-138 1-131 (132) 19 protein:vir:107756 Length: 147 76.2 0.14 8.6E-05 25.3 8.6 123 1-138 1-135 (147) 20 protein:vir:5976 Length: 102 # 72.4 0.13 8E-05 25.5 7.1 97 9-132 1-102 (102) 21 protein:vir:1271 Length: 115 # 71.1 0.2 0.00012 24.4 7.8 87 9-138 1-91 (115) 22 protein:vir:741 Length: 110 # 69.9 0.22 0.00013 24.2 8.2 106 6-138 1-108 (110) 23 protein:vir:97329 Length: 104 68.4 0.24 0.00015 24.0 8.0 101 6-137 1-104 (104) 24 protein:vir:94798 Length: 104 68.1 0.24 0.00015 24.0 7.9 101 6-137 1-104 (104) 25 protein:vir:107119 Length: 104 68.0 0.24 0.00015 24.0 7.9 100 6-137 1-104 (104) 26 protein:vir:105327 Length: 104 68.0 0.24 0.00015 24.0 7.9 100 6-137 1-104 (104) 27 protein:vir:96281 Length: 104 67.4 0.25 0.00016 23.9 7.9 100 6-137 1-104 (104) 28 protein:vir:95891 Length: 104 67.4 0.25 0.00016 23.9 7.9 100 6-137 1-104 (104) 29 protein:vir:81159 Length: 95 # 65.7 0.079 4.9E-05 26.6 4.4 91 6-136 1-95 (95) 30 protein:vir:79050 Length: 133 65.6 0.21 0.00013 24.3 6.7 120 1-138 1-130 (133) 31 protein:vir:3970 Length: 110 # 63.6 0.32 0.0002 23.3 7.7 106 6-138 1-108 (110) 32 protein:vir:93740 Length: 104 59.7 0.36 0.00022 23.0 6.9 101 6-137 1-104 (104) 33 protein:vir:1241 Length: 104 # 59.5 0.36 0.00023 23.0 6.9 101 6-137 1-104 (104) 34 protein:vir:105005 Length: 96 59.4 0.11 7E-05 25.8 4.1 92 3-138 1-95 (96) 35 protein:vir:102863 Length: 96 59.4 0.11 7E-05 25.8 4.1 92 3-138 1-95 (96) 36 protein:vir:107614 Length: 96 59.4 0.11 7E-05 25.8 4.1 92 3-138 1-95 (96) 37 protein:vir:102083 Length: 96 59.4 0.11 7E-05 25.8 4.1 92 3-138 1-95 (96) 38 protein:vir:97430 Length: 104 59.4 0.37 0.00023 23.0 6.9 101 6-137 1-104 (104) 39 protein:vir:94492 Length: 104 59.4 0.37 0.00023 23.0 6.9 101 6-137 1-104 (104) 40 protein:vir:95071 Length: 104 59.3 0.37 0.00023 22.9 6.9 101 6-137 1-104 (104) 41 protein:vir:5256 Length: 119 # 59.2 0.4 0.00025 22.8 8.5 113 8-135 1-119 (119) 42 protein:vir:96128 Length: 98 # 56.1 0.36 0.00023 23.0 6.3 95 6-136 1-98 (98) 43 protein:vir:100245 Length: 113 54.5 0.14 8.7E-05 25.3 3.7 98 6-134 1-113 (113) 44 protein:vir:3615 Length: 110 # 54.4 0.5 0.00031 22.2 7.6 106 1-138 1-108 (110) 45 protein:vir:192 Length: 108 # 53.7 0.52 0.00032 22.1 7.8 101 1-138 1-105 (108) 46 protein:vir:1887 Length: 108 # 53.7 0.52 0.00032 22.1 7.8 101 1-138 1-105 (108) 47 protein:vir:96831 Length: 98 # 50.5 0.56 0.00035 22.0 6.4 95 6-136 1-98 (98) 48 protein:vir:102158 Length: 99 49.0 0.26 0.00016 23.8 4.3 94 3-138 1-98 (99) 49 protein:vir:4831 Length: 105 # 45.6 0.32 0.0002 23.3 4.2 94 3-138 1-100 (105) 50 protein:vir:4954 Length: 104 # 43.7 0.32 0.0002 23.3 3.9 96 3-138 1-100 (104) 51 protein:vir:7410 Length: 107 # 38.9 0.51 0.00032 22.2 4.2 102 3-119 1-107 (107) 52 protein:vir:4857 Length: 104 # 38.3 0.47 0.00029 22.4 3.9 94 3-138 1-100 (104) 53 protein:vir:79640 Length: 134 36.9 1 0.00063 20.5 5.6 117 3-137 1-134 (134) 54 protein:vir:79253 Length: 138 36.5 0.43 0.00026 22.6 3.4 109 6-123 1-138 (138) 55 protein:vir:99222 Length: 138 36.5 0.43 0.00026 22.6 3.4 109 6-123 1-138 (138) 56 protein:vir:2505 Length: 128 # 36.3 0.38 0.00024 22.9 3.1 118 1-138 2-126 (128) 57 protein:vir:4998 Length: 106 # 34.5 0.7 0.00043 21.4 4.2 96 3-138 1-100 (106) 58 protein:vir:1384 Length: 92 # 32.6 0.68 0.00042 21.5 3.9 87 9-138 1-92 (92) 59 protein:vir:93592 Length: 108 32.5 0.91 0.00057 20.8 4.6 98 5-130 1-108 (108) 60 protein:vir:4702 Length: 113 # 29.4 0.7 0.00043 21.4 3.3 100 3-110 1-113 (113) 61 protein:vir:1993 Length: 141 # 28.5 0.97 0.0006 20.7 4.0 117 6-130 1-141 (141) 62 protein:vir:101559 Length: 158 27.9 1.8 0.0011 19.2 8.0 130 3-138 1-141 (158) 63 protein:vir:3639 Length: 158 # 27.9 1.8 0.0011 19.2 8.0 130 3-138 1-141 (158) 64 protein:vir:96108 Length: 155 25.3 2.1 0.0013 18.9 7.4 123 3-138 1-144 (155) 65 protein:vir:104088 Length: 125 24.7 2.1 0.0013 18.8 5.6 112 6-138 1-118 (125) 66 protein:vir:96488 Length: 113 24.2 2.2 0.0014 18.7 6.6 105 6-138 1-111 (113) 67 protein:vir:100103 Length: 120 24.2 1.7 0.0011 19.3 4.5 101 3-134 1-120 (120) 68 protein:vir:102961 Length: 131 23.7 2.3 0.0014 18.6 5.6 108 3-138 1-129 (131) No 1 >protein:vir:9821 Length: 138 # NCBI annotation: hypothetical protein # Family: family:all:1399 # MgeID: mge:176 # MgeName: 315.4 # Cross-refs: genbank:acc:NP_795583;genbank:gi:28876338;genbank:GeneID:1257921 Probab=100.00 E-value=1.7e-60 Score=348.32 Aligned_cols=138 Identities=100% Similarity=1.418 Sum_probs=136.4 Q ss_pred CccccccccCHHHHhcCCCCChhhHHHHHHHHHHHHhHHhcccccccCcccccHHHHHHHHHHHHHHHHHHHHcCCcccc Q lcl|Aclame:pro 1 MEVVIIAFLTQKEFEDLGFDDVEDFEKMEKRASHAVNLYCRNRYDYKDLKKEIALVQKAVKRAIAYQIAYLNDSGVMTAE 80 (138) Q Consensus 1 ~~~~~M~Ylt~~eY~~~g~~~~~~F~kl~~rAs~~ID~lT~~~~~~~~~d~~~~~~q~~vKkAvcaQiey~~~~G~~t~~ 80 (138) |||++|||||++||++++++++++|+||+||||++||++|++||++|+|+++.+|||++||||+|+|||||+++|+++++ T Consensus 1 ~~~~~M~YlT~eey~~l~~~~~~dF~kllk~As~~ID~~t~~~y~~~d~e~d~~~r~~~vKkA~a~QIeY~~~~G~ts~~ 80 (138) T protein:vir:98 1 MEVVIIAFLTQKEFEDLGFDDVEDFEKMEKRASHAVNLYCRNRYDYKDLKKEIALVQKAVKRAIAYQIAYLNDSGVMTAE 80 (138) T ss_pred CccccccccchHHHhccCCCChhhHHHHHHHHHHHhhhhhccccccccccchhHHHHHHHHHHHHHHHHHHHHcCCcchh Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred ccCccCceeecceEEecccccccccccccccccccchHHHHHHHhhcCceeccCcccC Q lcl|Aclame:pro 81 DKQSFAGISLGRTSISYTVGHGQGSQQKTLADRFNLCLDAENELLVVGLGYTGISYDR 138 (138) Q Consensus 81 ~~~~~~S~siG~tSvS~~~~~~~~~~~~~~~~~~~~s~~a~~~L~~tGLLyrGV~~~r 138 (138) ++++++|+|||||||||+.+++++++.+.++++++||++|++||.+||||||||+||| T Consensus 81 d~~~~~s~svGrTSiS~~~~~~~~s~~~~~~~~~~~s~~A~~~L~~tGLLY~GV~yd~ 138 (138) T protein:vir:98 81 DKQSFAGISLGRTSISYTVGHGQGSQQKTLADRFNLCLDAENELLVVGLGYTGISYDR 138 (138) T ss_pred hccCcCceEeeeeEeecccccccccccccccccccccHHHHHHHhhcCcccccCcccC Confidence 9999999999999999999999999999999999999999999999999999999999 No 2 >protein:vir:4788 Length: 130 # NCBI annotation: hypothetical protein # Family: family:all:1399 # MgeID: mge:104 # MgeName: MM1 # Cross-refs: genbank:acc:NP_150168;swissprot:trembl:q94m43;genbank:gi:15088779;uniprot:Q94M43;genbank:GeneID:955972 Probab=100.00 E-value=8.2e-52 Score=300.65 Aligned_cols=128 Identities=50% Similarity=0.810 Sum_probs=117.8 Q ss_pred ccccCHHHHhcCCCCChhhHHHHHHHHHHHHhHHhccccccc-CcccccHHHHHHHHHHHHHHHHHHHHcCCccccccCc Q lcl|Aclame:pro 6 IAFLTQKEFEDLGFDDVEDFEKMEKRASHAVNLYCRNRYDYK-DLKKEIALVQKAVKRAIAYQIAYLNDSGVMTAEDKQS 84 (138) Q Consensus 6 M~Ylt~~eY~~~g~~~~~~F~kl~~rAs~~ID~lT~~~~~~~-~~d~~~~~~q~~vKkAvcaQiey~~~~G~~t~~~~~~ 84 (138) |||||+|||.+++++++++|+||++||+++||++|++||+.| +|++..++||++||||+|+|||||+++|++++++++. T Consensus 1 M~YlT~eey~el~~~~~~~F~kl~k~A~~~ID~~t~~~y~~~~~~~~~~~~r~~~vK~A~a~QieY~~~~G~~s~~~~~~ 80 (130) T protein:vir:47 1 MTYLTQEEFDELDFDEVTDFEKLAKRAKIAIDLYTNGIYQKDIDFEKEIAYRKSAVKLAMAFQIAYLDASGIMSADDKQL 80 (130) T ss_pred CCCCchhhHhhcCCCChhhHHHHHHHHHHHHHHHhcccccccCCccCcchHHHHHHHHHHHHHHHHHHHhccccchhccC Confidence 999999999999999999999999999999999999999976 8888889999999999999999999999999999999 Q ss_pred cCceeecceEEecccccccccccccccccccchHHHHHHHhhcCc-eeccCcccC Q lcl|Aclame:pro 85 FAGISLGRTSISYTVGHGQGSQQKTLADRFNLCLDAENELLVVGL-GYTGISYDR 138 (138) Q Consensus 85 ~~S~siG~tSvS~~~~~~~~~~~~~~~~~~~~s~~a~~~L~~tGL-LyrGV~~~r 138 (138) ++|+||||||||+++..+ ..+..+++|+++|++||.+||| |||||+||| T Consensus 81 ~~S~svGrtSis~~~~~~-----~~~~~~~~vs~da~~~L~~tGL~Ly~GV~yd~ 130 (130) T protein:vir:47 81 ANSVSIGRTSISYSTSQS-----TLAGQRFNLSMDAENALRQAGFSLVVGVAYDR 130 (130) T ss_pred cceeeecceeeecCcCcc-----ccccCCccccHHHHHHHHhcccccccCCCccC Confidence 999999999999865332 2233356899999999999999 999999999 No 3 >protein:vir:98900 Length: 132 # NCBI annotation: hypothetical protein # Family: family:all:3882 # MgeID: mge:1568 # MgeName: BCJA1c # Cross-refs: genbank:acc:YP_164420;genbank:gi:56694910;genbank:GeneID:3197290 Probab=100.00 E-value=1.2e-46 Score=272.31 Aligned_cols=129 Identities=27% Similarity=0.288 Sum_probs=113.5 Q ss_pred ccccCHHHHhcCCCCCh--hhHHHHHHHHHHHHhHHhcccccccCcccccHHHHHHHHHHHHHHHHHHHHcCCcccc-cc Q lcl|Aclame:pro 6 IAFLTQKEFEDLGFDDV--EDFEKMEKRASHAVNLYCRNRYDYKDLKKEIALVQKAVKRAIAYQIAYLNDSGVMTAE-DK 82 (138) Q Consensus 6 M~Ylt~~eY~~~g~~~~--~~F~kl~~rAs~~ID~lT~~~~~~~~~d~~~~~~q~~vKkAvcaQiey~~~~G~~t~~-~~ 82 (138) |+|+|++||++++++.+ ++|+||++|||++||++|++||+.++|++|++|||++||||+|+||||++++|+++++ .+ T Consensus 1 M~Y~t~~~Y~~~~G~~i~e~~F~~l~~rAs~~ID~iT~~ri~~~~~~~d~~~~~~~vk~A~c~qiey~~~~G~~sae~~~ 80 (132) T protein:vir:98 1 MPYLTYEEFMDLNGRDIDDKKFEKLLPKASAIIDGVTGHFYQKVDMEKDNAWRVNQFKLALCAQIEYFDALGATTFEEIN 80 (132) T ss_pred CCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcccccCCCccccChHHHHHHHHHHHHHHHHHHhccchhhhhcc Confidence 99999999999888754 3499999999999999999999999999999999999999999999999999998865 47 Q ss_pred CccCceeecceEEecccccccccccccccccccchHHHHHHHhhcCceeccCccc Q lcl|Aclame:pro 83 QSFAGISLGRTSISYTVGHGQGSQQKTLADRFNLCLDAENELLVVGLGYTGISYD 137 (138) Q Consensus 83 ~~~~S~siG~tSvS~~~~~~~~~~~~~~~~~~~~s~~a~~~L~~tGLLyrGV~~~ 137 (138) ++++|+|+|++||||+++.+. ......+.+++++|++||++||||||||+.= T Consensus 81 ~~~~S~svG~~Svs~~s~~~~---~~~~~~~~~~~~~a~~~L~~tGLLyrGV~~~ 132 (132) T protein:vir:98 81 NSPQTFQAGRTSVSNASRYNP---SGANESKPLVAEDVYIYLQGTGLLFQGVKTW 132 (132) T ss_pred CccceeeeCcEEEEeeccCCc---ccccccccchHHHHHHHHhhcCCccccCCCC Confidence 789999999999999754332 2334456679999999999999999999933 No 4 >protein:vir:43 Length: 131 # NCBI annotation: gp8 # Family: family:all:3882 # MgeID: mge:2 # MgeName: A118 # Cross-refs: genbank:acc:NP_463469;swissprot:trembl:q9t1b5;genbank:gi:16798791;uniprot:Q9T1B5;genbank:GeneID:922374 Probab=100.00 E-value=6.8e-45 Score=262.73 Aligned_cols=128 Identities=21% Similarity=0.275 Sum_probs=113.6 Q ss_pred ccccCHHHHhc-CCCCCh--hhHHHHHHHHHHHHhHHhcccccccCcccccHHHHHHHHHHHHHHHHHHHHcCCcccccc Q lcl|Aclame:pro 6 IAFLTQKEFED-LGFDDV--EDFEKMEKRASHAVNLYCRNRYDYKDLKKEIALVQKAVKRAIAYQIAYLNDSGVMTAEDK 82 (138) Q Consensus 6 M~Ylt~~eY~~-~g~~~~--~~F~kl~~rAs~~ID~lT~~~~~~~~~d~~~~~~q~~vKkAvcaQiey~~~~G~~t~~~~ 82 (138) |||+|++||++ ++++.+ ++|++|++|||++||++|++||+.++|++++++++++||+|+|+||||++++|..++..+ T Consensus 1 M~Y~d~~~Y~~~y~g~~i~e~~F~~l~~rAs~~ID~~T~~ri~~~~~~~~~~~~~~~vk~A~c~q~e~~~~~g~~s~~~~ 80 (131) T protein:vir:43 1 MPYTTLEFYNDEYAGEHLEQDEFDKLLKHAERKIDSVTFYRIRKGGIESFSEFIQHQIQLATCNQIEYFKEAGGTSELAV 80 (131) T ss_pred CCCCCHHHHHHhhCCCCCCHhHHHHHHHHHHHHHHHHhcccccccCccccchhhHHHHHHHHHHHHHHHHHhHHHhhhhc Confidence 99999999986 566654 359999999999999999999999999999999999999999999999999999888788 Q ss_pred CccCceeecceEEecccccccccccccccccccchHHHHHHHhhcCceeccCccc Q lcl|Aclame:pro 83 QSFAGISLGRTSISYTVGHGQGSQQKTLADRFNLCLDAENELLVVGLGYTGISYD 137 (138) Q Consensus 83 ~~~~S~siG~tSvS~~~~~~~~~~~~~~~~~~~~s~~a~~~L~~tGLLyrGV~~~ 137 (138) +.++|+|+|++||||++.+. .....++.+++++|++||++||||||||+|- T Consensus 81 ~~~~S~svG~~Svs~~~~~~----~~~~~~~~~~~~~a~~~L~~TGLlyrGV~~~ 131 (131) T protein:vir:43 81 SKPDNVSIGRTSISDSNFAS----TATSLNSGLIGSDVRSYLAHTGLLYNGVGVR 131 (131) T ss_pred cccCeeecCceEEeeccccc----chhhhchhhhHHHHHHHHhccCCeecCCCCC Confidence 88999999999999975433 2233344569999999999999999999998 No 5 >protein:vir:80967 Length: 131 # NCBI annotation: gp8 # Family: family:all:3882 # MgeID: mge:1886 # MgeName: A500 # Cross-refs: genbank:acc:YP_001468394;genbank:gi:157324968;genbank:GeneID:5601402 Probab=100.00 E-value=1.1e-44 Score=261.64 Aligned_cols=128 Identities=20% Similarity=0.242 Sum_probs=113.5 Q ss_pred ccccCHHHHhcC-CCCC-h-hhHHHHHHHHHHHHhHHhcccccccCcccccHHHHHHHHHHHHHHHHHHHHcCCcccccc Q lcl|Aclame:pro 6 IAFLTQKEFEDL-GFDD-V-EDFEKMEKRASHAVNLYCRNRYDYKDLKKEIALVQKAVKRAIAYQIAYLNDSGVMTAEDK 82 (138) Q Consensus 6 M~Ylt~~eY~~~-g~~~-~-~~F~kl~~rAs~~ID~lT~~~~~~~~~d~~~~~~q~~vKkAvcaQiey~~~~G~~t~~~~ 82 (138) |||+|++||++. ++.. + ++|++|++|||++||++|++||+.++||+++++++++||+|+|+||||+.++|..++..+ T Consensus 1 M~Y~d~~~Y~~~y~G~~i~e~~F~~l~~rAs~~ID~~T~~ri~~~~~d~~~~~~~~~vk~A~c~q~e~~~~~g~~~~~~~ 80 (131) T protein:vir:80 1 MPYTTLEFYTNEYAGEHLEQDEFAKLLKHAERKIDSVTFYRIRKSGIEAFSEFIQHQIQLATCNQIEYFKEAGGTSELAV 80 (131) T ss_pred CCCCCHHHHHHhhCCCCCchhHHHHHHHHHHHHHHHHhcccccccccccCchhHHHHHHHHHHHHHHHHHHhhhhhhhcc Confidence 999999999875 4443 3 359999999999999999999999999999999999999999999999999999887778 Q ss_pred CccCceeecceEEecccccccccccccccccccchHHHHHHHhhcCceeccCccc Q lcl|Aclame:pro 83 QSFAGISLGRTSISYTVGHGQGSQQKTLADRFNLCLDAENELLVVGLGYTGISYD 137 (138) Q Consensus 83 ~~~~S~siG~tSvS~~~~~~~~~~~~~~~~~~~~s~~a~~~L~~tGLLyrGV~~~ 137 (138) +.++|+|+|++||||++.+. .....++.+|+++|++||++||||||||+|- T Consensus 81 ~~~~S~svG~~Svs~~~~~~----~~~~~~~~~~~~~a~~~L~~TGLlyrGV~~~ 131 (131) T protein:vir:80 81 SKPDNVSIGRTSISDSNFAS----TATSLNSGLVGSDVRSYLAHTGLLYNGVGVR 131 (131) T ss_pred cccCeeeeCceEEeeccccc----hhhhhhhhhhHHHHHHHHhccCCeecCCCCC Confidence 88999999999999975333 2333445679999999999999999999998 No 6 >protein:vir:79701 Length: 144 # NCBI annotation: hypothetical protein # Family: family:all:1399 # MgeID: mge:1873 # MgeName: LL-H # Cross-refs: genbank:acc:YP_001285884;genbank:gi:148750841;genbank:GeneID:5220403 Probab=100.00 E-value=1.2e-44 Score=261.41 Aligned_cols=129 Identities=28% Similarity=0.445 Sum_probs=113.7 Q ss_pred cccccCHHHHhcCCCCChh--hHHHHHHHHHHHHhHHhccc---ccccCccccc--------HHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 5 IIAFLTQKEFEDLGFDDVE--DFEKMEKRASHAVNLYCRNR---YDYKDLKKEI--------ALVQKAVKRAIAYQIAYL 71 (138) Q Consensus 5 ~M~Ylt~~eY~~~g~~~~~--~F~kl~~rAs~~ID~lT~~~---~~~~~~d~~~--------~~~q~~vKkAvcaQiey~ 71 (138) .-||||++||+++|++.++ +|+||+|||+++||++|+|| |+.|+|++|+ ++|+++||||+|+||||+ T Consensus 1 ~~pYLTy~ef~~lg~~~~~~d~F~kllk~A~~~ID~~T~y~~~~y~~~~i~~d~~~d~~~~~~~r~~~vKkA~a~QIeY~ 80 (144) T protein:vir:79 1 MKPYLTTSDFEKLGYELKKPDNFGKLLKSATVLINQICSYYDPAFAYHDLEADSQADPDSYLFRQAMAFKKAVALEMLFL 80 (144) T ss_pred CCcccchhhhhhhCCCCcchhhhhhHHHHHHHHhhhhhhhhccccccccccccccccchhhhhHHHHHHHHHHHHHHHHH Confidence 2389999999999987554 59999999999999999999 8888887775 589999999999999999 Q ss_pred HHcCCccccc--cCccCceeecceEEecccccccccccccccccccchHHHHHHHhhcCceeccCccc Q lcl|Aclame:pro 72 NDSGVMTAED--KQSFAGISLGRTSISYTVGHGQGSQQKTLADRFNLCLDAENELLVVGLGYTGISYD 137 (138) Q Consensus 72 ~~~G~~t~~~--~~~~~S~siG~tSvS~~~~~~~~~~~~~~~~~~~~s~~a~~~L~~tGLLyrGV~~~ 137 (138) +++|++++++ +++++|+||||||||++++++.+ .+.++.+|+++|++||++||||||||+.. T Consensus 81 ~~~G~~sa~e~~~~~~~S~svGrtsvs~~~~~~~s----~t~~~~~v~~~a~~yL~~tGLLYrGV~s~ 144 (144) T protein:vir:79 81 EDSGYSSAYDVAQGALNSFTVGHTSMSLNPSAGQN----LTVGSTGVVKSAYDLLGRYGLLFSGVASL 144 (144) T ss_pred HHcCCcchhhhhcCccceeEecceEEeecCCCccc----cccccccccHHHHHHHhhcCccccccccC Confidence 9999999876 88999999999999987655443 44556679999999999999999999999 No 7 >protein:vir:3034 Length: 111 # NCBI annotation: hypothetical protein # Family: family:all:1399 # MgeID: mge:61 # MgeName: PhiNIH1.1 # Cross-refs: genbank:acc:NP_438147;genbank:gi:16271810;genbank:GeneID:929268 Probab=100.00 E-value=1.4e-43 Score=255.51 Aligned_cols=111 Identities=100% Similarity=1.416 Sum_probs=109.8 Q ss_pred HHHHHHHHHhHHhcccccccCcccccHHHHHHHHHHHHHHHHHHHHcCCccccccCccCceeecceEEeccccccccccc Q lcl|Aclame:pro 28 MEKRASHAVNLYCRNRYDYKDLKKEIALVQKAVKRAIAYQIAYLNDSGVMTAEDKQSFAGISLGRTSISYTVGHGQGSQQ 107 (138) Q Consensus 28 l~~rAs~~ID~lT~~~~~~~~~d~~~~~~q~~vKkAvcaQiey~~~~G~~t~~~~~~~~S~siG~tSvS~~~~~~~~~~~ 107 (138) |+|+|+.+||++|++||+.|+|++|..+|+++||||+|.||+||++.|+++++++++++|+||||||||+.++++++++. T Consensus 1 L~k~A~~~Id~~t~~fY~~~dle~D~~~R~~~fK~Aia~QI~Yld~~G~~t~~d~~s~~SisvGrTsiS~~~~~~~~~~~ 80 (111) T protein:vir:30 1 MEKRASHAVNLYCRNRYDYKDLKKEIALVQKAVKRAIAYQIAYLNDSGVMTAEDKQSFAGISLGRTSISYTVGHGQGSQQ 80 (111) T ss_pred CchhhHHHHhHhhchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCChhhccCcceeeecceeeeccCccCCCCcc Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred ccccccccchHHHHHHHhhcCceeccCcccC Q lcl|Aclame:pro 108 KTLADRFNLCLDAENELLVVGLGYTGISYDR 138 (138) Q Consensus 108 ~~~~~~~~~s~~a~~~L~~tGLLyrGV~~~r 138 (138) ..++++++|+.||+++|.++|||||||+||| T Consensus 81 ~~t~~~~~l~~da~n~L~~~Glly~GV~yd~ 111 (111) T protein:vir:30 81 KTLADRFNLCLDAENELLVVGLGYTGISYDR 111 (111) T ss_pred ccccccccchHHHHHHHHhhccccccccccC Confidence 9999999999999999999999999999999 No 8 >protein:vir:78916 Length: 117 # NCBI annotation: gp8 # Family: family:all:10242 # MgeID: mge:1859 # MgeName: A006 # Cross-refs: genbank:acc:YP_001468848;genbank:gi:157325483;genbank:GeneID:5601913 Probab=98.06 E-value=2.4e-08 Score=62.35 Aligned_cols=115 Identities=21% Similarity=0.299 Sum_probs=78.5 Q ss_pred cccccCHHHHhcCCCC--ChhhHHHHHHHHHHHHhHHhcccccccCcccccHHHHHHHHHHHHHHHHHHHHcCCcccccc Q lcl|Aclame:pro 5 IIAFLTQKEFEDLGFD--DVEDFEKMEKRASHAVNLYCRNRYDYKDLKKEIALVQKAVKRAIAYQIAYLNDSGVMTAEDK 82 (138) Q Consensus 5 ~M~Ylt~~eY~~~g~~--~~~~F~kl~~rAs~~ID~lT~~~~~~~~~d~~~~~~q~~vKkAvcaQiey~~~~G~~t~~~~ 82 (138) .-.|+|+.|...+..- +|.+-+.|+|.||-.||...---+ .++|+ +-+-+|.|||.|+|.+..+|.-. T Consensus 1 mktyitpselasltnlsiepteadnlikaasvaidkqimpni--vdldn----vdddikqavawqcehikkygefi---- 70 (117) T protein:vir:78 1 MKTYITPSELASLTNLSIEPTEADNLIKAASVAIDKQIMPNI--VDLDN----VDDDIKQAVAWQCEHIKKYGEFI---- 70 (117) T ss_pred Cccccchhhhhhhhccccccccchhhhhhhhhhhhhhhcccc--ccccc----cchhhHHHHhhhHHHHHhhhhhc---- Confidence 1249999999876543 456799999999999996432112 13433 33568999999999999999643 Q ss_pred CccCceeecceEEecccccccccccccccccccchHHHHHHHhhcCceeccCccc Q lcl|Aclame:pro 83 QSFAGISLGRTSISYTVGHGQGSQQKTLADRFNLCLDAENELLVVGLGYTGISYD 137 (138) Q Consensus 83 ~~~~S~siG~tSvS~~~~~~~~~~~~~~~~~~~~s~~a~~~L~~tGLLyrGV~~~ 137 (138) .+..++.|+..+-. .+.++.. --+ .+...++.+|-..|.||-||+-- T Consensus 71 -gignftlgkltmgg---qsqnsnn--fip--dvpdkvmdlllssgwlyagvggc 117 (117) T protein:vir:78 71 -GIGNFTLGKLTMGG---QSQNSNN--FIP--DVPDKVMDLLLSSGWLYAGVGGC 117 (117) T ss_pred -ccccceeeeeeecc---cccccCC--cCC--ccchHHHHHHhhccchhcccCCC Confidence 24567777766621 1111111 111 37778999999999999999755 No 9 >protein:vir:94955 Length: 170 # NCBI annotation: hypothetical protein # Family: family:all:703 # MgeID: mge:1538 # MgeName: Xp15 # Cross-refs: genbank:acc:YP_239280;genbank:gi:66392062;genbank:GeneID:5076600 Probab=97.34 E-value=3.5e-06 Score=50.50 Aligned_cols=119 Identities=14% Similarity=0.082 Sum_probs=70.1 Q ss_pred cccc----------cccCHHHHhc----CCC------CChhhHHHHHHHHHHHHhH-H-----------------hcccc Q lcl|Aclame:pro 3 VVII----------AFLTQKEFED----LGF------DDVEDFEKMEKRASHAVNL-Y-----------------CRNRY 44 (138) Q Consensus 3 ~~~M----------~Ylt~~eY~~----~g~------~~~~~F~kl~~rAs~~ID~-l-----------------T~~~~ 44 (138) |++. +|+|-++.+. .+. .+.++-+++|-+|++.||. + |+.++ T Consensus 1 m~~i~~~~g~~~AnSYvtv~ea~aY~~~r~~~~~w~~~~~~~~e~aL~~A~dyId~~~~f~G~r~~~~Q~l~wPR~g~~~ 80 (170) T protein:vir:94 1 MPTVDATPGSITANSYVTVAEANSYFDGSYGRPLWTSASEDEKASLVISASRYLDQMMAWIGAPTNPEQSMWWPCKNAVI 80 (170) T ss_pred CceeecCCCCCcccceecHHHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHhccccccccccCCcchhhcccccCccc Confidence 4433 4888776544 232 1224589999999999996 3 22222 Q ss_pred cccCcccccHHHHHHHHHHHHHHHHHHHHcCCccccccCccCceeecceEEecccccccccccccccccccchHHHHHHH Q lcl|Aclame:pro 45 DYKDLKKEIALVQKAVKRAIAYQIAYLNDSGVMTAEDKQSFAGISLGRTSISYTVGHGQGSQQKTLADRFNLCLDAENEL 124 (138) Q Consensus 45 ~~~~~d~~~~~~q~~vKkAvcaQiey~~~~G~~t~~~~~~~~S~siG~tSvS~~~~~~~~~~~~~~~~~~~~s~~a~~~L 124 (138) ++..++. +.+-.+||.|+|.=+-++.+.+.......+.+.+.+||.++++|..++...+ .+.-+..+| T Consensus 81 dg~~~~~--~~IP~~V~~Aq~elA~~~~~~~~~~~~~~~~v~~~kVG~i~veY~~~~~~~~----------~~~~v~~LL 148 (170) T protein:vir:94 81 GGMTLSQ--VSIPVKVKIAVFELAYFMLESGAALSFADQTIDSVKVGTIRVEFTKNSTDAG----------LPTFVEAML 148 (170) T ss_pred Ccccccc--chhhHHHHHHHHHHHHHHHhCcccCcccccceeeEecceeEEEecCCCCCCc----------cHHHHHHHh Confidence 2222222 3566789999996555555544444445677899999999999974332211 122233444 Q ss_pred ----hhcCc---------eecc Q lcl|Aclame:pro 125 ----LVVGL---------GYTG 133 (138) Q Consensus 125 ----~~tGL---------LyrG 133 (138) .+-|+ ++|| T Consensus 149 ~p~l~~~~~g~~~~~~~~~~r~ 170 (170) T protein:vir:94 149 SGFGSPVLYGSNAARSIDLVRA 170 (170) T ss_pred hhhhccccccccccceeeeecC Confidence 33222 4555 No 10 >protein:vir:80389 Length: 172 # NCBI annotation: BcepGomrgp09 # Family: family:all:703 # MgeID: mge:1882 # MgeName: BcepGomr # Cross-refs: genbank:acc:YP_001210229;genbank:gi:146329921;genbank:GeneID:5123498 Probab=97.26 E-value=7.8e-06 Score=48.59 Aligned_cols=131 Identities=14% Similarity=0.130 Sum_probs=76.2 Q ss_pred Ccccc---------ccccCHHHHhc----CCCCCh-hhHHHHHHHHHHHHhHHhcccc-cccCc---------------- Q lcl|Aclame:pro 1 MEVVI---------IAFLTQKEFED----LGFDDV-EDFEKMEKRASHAVNLYCRNRY-DYKDL---------------- 49 (138) Q Consensus 1 ~~~~~---------M~Ylt~~eY~~----~g~~~~-~~F~kl~~rAs~~ID~lT~~~~-~~~~~---------------- 49 (138) |-++. =+|+|.++.+. .|...+ ++-+++|-+|++.||.+...|. .+.+- T Consensus 1 Malived~~g~~~anSYvt~~~a~aY~~~rg~~~~~d~~e~aL~~A~dyid~~~~~f~G~r~~~~Q~l~wPR~g~~~~g~ 80 (172) T protein:vir:80 1 MALIVEDGTGKPDANTYAGADFVIAYAQARGVTVDADEAERLILEAMDYIESFRRRWKGERNTREQGLTWPRHDAVVDGF 80 (172) T ss_pred CeeEeeCCCCCccccccccHHHHHHHHHHcCCCcCHHHHHHHHHHHHHHHhhccCccccccCCccccccccccCcccCcc Confidence 44322 35999886654 355544 3589999999999999653232 11111 Q ss_pred ccccHHHHHHHHHHHHHHHHHHHHcCCcc--ccccCccCceeecceEEecccccccccccccccccccchHHHHHHHhh- Q lcl|Aclame:pro 50 KKEIALVQKAVKRAIAYQIAYLNDSGVMT--AEDKQSFAGISLGRTSISYTVGHGQGSQQKTLADRFNLCLDAENELLV- 126 (138) Q Consensus 50 d~~~~~~q~~vKkAvcaQiey~~~~G~~t--~~~~~~~~S~siG~tSvS~~~~~~~~~~~~~~~~~~~~s~~a~~~L~~- 126 (138) .-..+.+-.+||.|+|.=+-.+. .|.+. ......+.+.+||..+++|..+.+..+...+... ....+-+..+|++ T Consensus 81 ~~~~~~IP~~v~~A~~elA~~~~-~g~~~~~~~~~~~v~~ekVG~i~~eY~~~~~~~~~~~~~~~-~~~~~~v~~LL~p~ 158 (172) T protein:vir:80 81 VIPSDVIPKELQSAVAAAVIEQV-NGFELQQSQDQWAVRIEKVDVIEVQYAAGGGGQSASANAPM-KPTFPKIDALLNPL 158 (172) T ss_pred cccccchhHHHHHHHHHHHHHHh-cCCccCcCCCCceeeEEeccceEEeeecccCccccccccCC-ccchHHHHHHHhhh Confidence 11124566899999997665444 45322 2234568999999999999876554433222111 1133445566654 Q ss_pred ----cCc---eecc Q lcl|Aclame:pro 127 ----VGL---GYTG 133 (138) Q Consensus 127 ----tGL---LyrG 133 (138) -|+ +.|| T Consensus 159 l~~~gg~~~~~vrg 172 (172) T protein:vir:80 159 LVGDGGLFLVAVRG 172 (172) T ss_pred hcCCCCeeeeeecC Confidence 332 4555 No 11 >protein:vir:95176 Length: 172 # NCBI annotation: hypothetical protein ORF013 # Family: family:all:703 # MgeID: mge:1552 # MgeName: PA73 # Cross-refs: genbank:acc:YP_001293420;genbank:gi:148912841;genbank:GeneID:5228251 Probab=96.98 E-value=1.1e-05 Score=47.74 Aligned_cols=127 Identities=14% Similarity=0.129 Sum_probs=71.2 Q ss_pred Ccccc---------ccccCHHHHhc----CCCC---ChhhHHHHHHHHHHHHhHH-hccccccc-----------C---- Q lcl|Aclame:pro 1 MEVVI---------IAFLTQKEFED----LGFD---DVEDFEKMEKRASHAVNLY-CRNRYDYK-----------D---- 48 (138) Q Consensus 1 ~~~~~---------M~Ylt~~eY~~----~g~~---~~~~F~kl~~rAs~~ID~l-T~~~~~~~-----------~---- 48 (138) |-++. =+|+|.++.+. .|.. +.++.+++|-+|++.||.. .+++=.+. | T Consensus 3 Malive~~~g~~~anSYvtv~ea~aY~~~rg~~~~~~~~~ke~aL~~A~dyid~~~~~f~G~r~~~~Q~l~wPR~g~~~~ 82 (172) T protein:vir:95 3 ITIVVEDGSGVTNANSYVSVADARIYASNRGVELPLDDDELAAMLIRSTDYLEAQACRFQGKPTSTTQALQWPRTGVFLN 82 (172) T ss_pred eeEEEeCCCCCCcccccccHHHHHHHHHhcCCcCCCChHHHHHHHHHHHHHhhccCCceeeeecCCcccccCCcCCcccC Confidence 33332 35999887654 2433 2245899999999999962 11110111 1 Q ss_pred -cccccHHHHHHHHHHHHHHHHHHHHcCCc-c--ccccCccCceeecceEEecccccccccccccccccccchHHHHHHH Q lcl|Aclame:pro 49 -LKKEIALVQKAVKRAIAYQIAYLNDSGVM-T--AEDKQSFAGISLGRTSISYTVGHGQGSQQKTLADRFNLCLDAENEL 124 (138) Q Consensus 49 -~d~~~~~~q~~vKkAvcaQiey~~~~G~~-t--~~~~~~~~S~siG~tSvS~~~~~~~~~~~~~~~~~~~~s~~a~~~L 124 (138) ..-..+.+-.+||.|+|.=+-.+. .|.+ . ....+.+.+.+||.++++|..+.+.+.+ ...+-+..+| T Consensus 83 ~~~v~~~~IP~~V~~A~~elA~~~~-~~~~~~~~~~~~~~vk~~kVG~I~veY~~~~~~~~~--------~~~~~v~~LL 153 (172) T protein:vir:95 83 EDEVPSNVIPKSLIAAQVQLTMAIN-AGFDLQPNVSPQDYVTREKVGPIETEYADPLSVGIM--------PTFTAANALL 153 (172) T ss_pred cccccccchhHHHHHHHHHHHHHHH-cCccccccCCcccceeEEeccceEEeeccCCCCCCc--------ccHHHHHHHH Confidence 111123566899999996654444 4432 1 2234568899999999999754433221 1234566677 Q ss_pred hhcCceecc------CcccC Q lcl|Aclame:pro 125 LVVGLGYTG------ISYDR 138 (138) Q Consensus 125 ~~tGLLyrG------V~~~r 138 (138) ++ ||..| |.--| T Consensus 154 ~p--~l~~~~~~~~~~r~~r 171 (172) T protein:vir:95 154 AP--LFGECASNKFALRTIR 171 (172) T ss_pred hh--hhcccCCcceeeEEEe Confidence 43 33222 33444 No 12 >protein:vir:97267 Length: 172 # NCBI annotation: hypothetical protein ORF024 # Family: family:all:703 # MgeID: mge:1657 # MgeName: M6 # Cross-refs: genbank:acc:YP_001294532;genbank:gi:149408253;genbank:GeneID:5237132 Probab=96.80 E-value=3.8e-05 Score=44.79 Aligned_cols=130 Identities=18% Similarity=0.092 Sum_probs=76.8 Q ss_pred Ccccc----------ccccCHHHHhc----CCCC----ChhhHHHHHHHHHHHHhHHhcccc-cccCccc---------- Q lcl|Aclame:pro 1 MEVVI----------IAFLTQKEFED----LGFD----DVEDFEKMEKRASHAVNLYCRNRY-DYKDLKK---------- 51 (138) Q Consensus 1 ~~~~~----------M~Ylt~~eY~~----~g~~----~~~~F~kl~~rAs~~ID~lT~~~~-~~~~~d~---------- 51 (138) |-|+. =+|+|-++.+- .|.. +.+..+++|.+|++.||....+.= ...+.+. T Consensus 1 m~liveD~t~~~~~AnSYvtv~~a~aY~~~rg~~~~a~~~~~ke~aLi~A~~yiD~~~~f~G~r~~~~~Q~l~WPRtg~~ 80 (172) T protein:vir:97 1 MALIVQDNTGAVAGANAYISVEEFKTYHTDRGNSFAGSTDPQIEAAVIRATDYLDQRFNFVGKKRLGRDQTTEWPRTDAW 80 (172) T ss_pred CceEeeCCCCCCCCccccccHHHHHHHHHhcCcccCCCCcHHHHHHHHHHHHHHhhhhhcccCCCCCcchhhhcccCCCC Confidence 55443 34888775543 3432 223488999999999998432221 1122211 Q ss_pred -----ccHHHHHHHHHHHHHHHHHHHHcCC-ccccc------cCccCceeecceEEecccccccccccccccccccchHH Q lcl|Aclame:pro 52 -----EIALVQKAVKRAIAYQIAYLNDSGV-MTAED------KQSFAGISLGRTSISYTVGHGQGSQQKTLADRFNLCLD 119 (138) Q Consensus 52 -----~~~~~q~~vKkAvcaQiey~~~~G~-~t~~~------~~~~~S~siG~tSvS~~~~~~~~~~~~~~~~~~~~s~~ 119 (138) ..+.+-.+||.|+|.=+ +....|. ..+.. ...+.++.+|.+++.|....+..+ ... ..+- T Consensus 81 d~~~~~~~~IP~~v~~A~~elA-~~al~~~l~~d~~~~~~~~~v~~kr~kvg~i~~~y~~~~~~~~----~~p---~~~~ 152 (172) T protein:vir:97 81 DRDRYYINDIPPEVKEACAEYA-LRALAAELNPDPERNASGVAVLSKSEAVGPISESVTFVGGAVF----QMP---KYPA 152 (172) T ss_pred CCcccccccccHHHHHHHHHHH-HHHHhcccccccccccccccceeeeeeecceeeEeeccCCCCC----ccc---cHHH Confidence 12346689999999544 3333443 22111 124668899999998865433221 111 3455 Q ss_pred HHHHHhhcCceeccCcccC Q lcl|Aclame:pro 120 AENELLVVGLGYTGISYDR 138 (138) Q Consensus 120 a~~~L~~tGLLyrGV~~~r 138 (138) +..+|++-||.-.|.-..| T Consensus 153 v~aLL~p~gl~~~~~~~~r 171 (172) T protein:vir:97 153 ADQKLVRAGLVRSGGTLLR 171 (172) T ss_pred HHHHHhhhccccCcceecc Confidence 7889999888888887888 No 13 >protein:vir:95004 Length: 169 # NCBI annotation: hypothetical protein # Family: family:all:703 # MgeID: mge:1547 # MgeName: KS7 # Cross-refs: genbank:acc:YP_224025;genbank:gi:62327312;genbank:GeneID:5176832 Probab=96.74 E-value=2.3e-05 Score=46.05 Aligned_cols=124 Identities=15% Similarity=0.144 Sum_probs=69.1 Q ss_pred Cccc---------cccccCHHHHhc----CCCCCh---hhHHHHHHHHHHHHhHHhcccccc------------cC--cc Q lcl|Aclame:pro 1 MEVV---------IIAFLTQKEFED----LGFDDV---EDFEKMEKRASHAVNLYCRNRYDY------------KD--LK 50 (138) Q Consensus 1 ~~~~---------~M~Ylt~~eY~~----~g~~~~---~~F~kl~~rAs~~ID~lT~~~~~~------------~~--~d 50 (138) |-++ -=+|+|-++.+. .|...+ +.-+++|.+|++.||.+...|+-. .| ++ T Consensus 1 M~liv~~~~g~~~anSYvt~~ea~aY~~~rg~~~~~dd~~~e~aL~~A~~yid~~~~~f~G~r~~~~Q~l~wPRtg~~~~ 80 (169) T protein:vir:95 1 MPLIVETGQGLPNADSYVSLEDGRALAAKYGLELPEDDIAAEASLRNGAVYVGLFESQMCGRRVSANQALAFPRTGIDLH 80 (169) T ss_pred CeeEEeCCCCCCcccccccHHHHHHHHHHcCCcCCCCHHHHHHHHHHHHHHhhccccccccccCCcchhhccccCCceec Confidence 3211 124999886654 344332 347999999999999975433311 12 12 Q ss_pred cc---cHHHHHHHHHHHHHHHHHHHHcCCcc--ccccCccCc-eeecceEEecccccccccccccccccccchHHHHHHH Q lcl|Aclame:pro 51 KE---IALVQKAVKRAIAYQIAYLNDSGVMT--AEDKQSFAG-ISLGRTSISYTVGHGQGSQQKTLADRFNLCLDAENEL 124 (138) Q Consensus 51 ~~---~~~~q~~vKkAvcaQiey~~~~G~~t--~~~~~~~~S-~siG~tSvS~~~~~~~~~~~~~~~~~~~~s~~a~~~L 124 (138) -+ .+.+-.+||.|+|. ..+....|... ....+.+.+ ..+|.++++|..+++.+.+.. .+.+..+| T Consensus 81 g~~~~~~~IP~~V~~A~~e-lA~~~~~g~~~~~~~~~~~v~~e~v~G~i~veY~~~~~~~~~~~--------~~a~~~LL 151 (169) T protein:vir:95 81 GFPQPSNVIPSLVIQAQVM-AAVEYGAGTDVRGSTDGREVQTERVEGAVTVSYFKNGYSGGTVS--------ITAADDAL 151 (169) T ss_pred ccccccccchHHHHHHHHH-HHHHHHcCccccCCCCccceeeeeeccceeEeecCCCCcCcccc--------HHHHHHhh Confidence 22 23466899999995 44444445421 122334443 456999999976444332222 23456677 Q ss_pred hhc-----Cc----eecc Q lcl|Aclame:pro 125 LVV-----GL----GYTG 133 (138) Q Consensus 125 ~~t-----GL----LyrG 133 (138) ++- |. ++|| T Consensus 152 ~p~l~g~~g~~~i~~~rg 169 (169) T protein:vir:95 152 RPLLCGSNNAYSFNVFRG 169 (169) T ss_pred hhhcccCCCcceeeeecC Confidence 653 31 5566 No 14 >protein:vir:78383 Length: 169 # NCBI annotation: hypothetical protein # Family: family:all:703 # MgeID: mge:1851 # MgeName: SETP3 # Cross-refs: genbank:acc:YP_001110841;genbank:gi:134288602;genbank:GeneID:5179646 Probab=95.71 E-value=0.00019 Score=40.97 Aligned_cols=124 Identities=13% Similarity=0.144 Sum_probs=71.2 Q ss_pred Cccc---------cccccCHHHHhc----CCCCCh---hhHHHHHHHHHHHHhHHhcccc-cccCccc------------ Q lcl|Aclame:pro 1 MEVV---------IIAFLTQKEFED----LGFDDV---EDFEKMEKRASHAVNLYCRNRY-DYKDLKK------------ 51 (138) Q Consensus 1 ~~~~---------~M~Ylt~~eY~~----~g~~~~---~~F~kl~~rAs~~ID~lT~~~~-~~~~~d~------------ 51 (138) |-+. -=+|+|-++.+. .|...+ +.-+++|.+|++.||.+...|+ .+.+-+. T Consensus 1 MaliV~~~~g~~~anSYvtv~~a~aY~~~rg~~~~~d~~~~e~aL~~A~~yid~~~~~f~G~r~~~~Q~l~wPRtg~~~~ 80 (169) T protein:vir:78 1 MPLIVETGQGIPNADSYVSLEDGRALAAKYGLELPEDDTAAEAALRNGAVYVGLFESQMCGRRVSANQALAFPRTGVTLH 80 (169) T ss_pred CeeEeeCCCCCccccccccHHHHHHHHHHcCCcCCCChHHHHHHHHHHHHHhhhccccceeeeCCcccccccccCCceec Confidence 2211 124999886654 344332 4589999999999998754333 2222111 Q ss_pred -c---cHHHHHHHHHHHHHHHHHHHHcCCc-c-ccccCccCceee-cceEEecccccccccccccccccccchHHHHHHH Q lcl|Aclame:pro 52 -E---IALVQKAVKRAIAYQIAYLNDSGVM-T-AEDKQSFAGISL-GRTSISYTVGHGQGSQQKTLADRFNLCLDAENEL 124 (138) Q Consensus 52 -~---~~~~q~~vKkAvcaQiey~~~~G~~-t-~~~~~~~~S~si-G~tSvS~~~~~~~~~~~~~~~~~~~~s~~a~~~L 124 (138) + .+.+-.+||.|+|.=+-++. .|.. . ....+.+.+..+ |.+++.|..+...+.+. ..+.+..+| T Consensus 81 g~~~~~~~IP~~v~~A~~elA~~~~-~g~~~~~~~~~~~v~~e~v~G~i~veY~~~~~~~~~~--------~~~~~~~LL 151 (169) T protein:vir:78 81 GFPQPSNVIPPLVIQAQVMAAVEYG-AGTDVRGSTDGREVQTERVEGAVTVSYFKNGYSGGTV--------SITTADDAL 151 (169) T ss_pred ccccccccchHHHHHHHHHHHHHHh-cCcccCCCCCcceeEEEEecCceeEeecCCCCCCCcc--------cHHHHHHHh Confidence 1 13466899999996555443 4432 2 224456777777 99999997543332211 234566677 Q ss_pred hhc-----C----ceecc Q lcl|Aclame:pro 125 LVV-----G----LGYTG 133 (138) Q Consensus 125 ~~t-----G----LLyrG 133 (138) ++- | =++|| T Consensus 152 ~p~l~~~~g~~~i~~~rg 169 (169) T protein:vir:78 152 RPLLCGSNNAYSFNVFRG 169 (169) T ss_pred hhhcccCCCcceeeeecC Confidence 653 2 25566 No 15 >protein:vir:9761 Length: 140 # NCBI annotation: hypothetical protein # Family: family:all:1271 # MgeID: mge:175 # MgeName: 315.3 # Cross-refs: genbank:acc:NP_795523;genbank:gi:28876281;genbank:GeneID:1257822 Probab=92.29 E-value=0.003 Score=34.44 Aligned_cols=121 Identities=18% Similarity=0.086 Sum_probs=63.4 Q ss_pred cccccccCHHHHhcCC----CCChhhHHHHHHHHHHHHhHHhcccccccCcccc---cHHHHHHHHHHHHHHHHHHHH-c Q lcl|Aclame:pro 3 VVIIAFLTQKEFEDLG----FDDVEDFEKMEKRASHAVNLYCRNRYDYKDLKKE---IALVQKAVKRAIAYQIAYLND-S 74 (138) Q Consensus 3 ~~~M~Ylt~~eY~~~g----~~~~~~F~kl~~rAs~~ID~lT~~~~~~~~~d~~---~~~~q~~vKkAvcaQiey~~~-~ 74 (138) |. +|+|.++++..- .++.+-...||..||+.|..-.... +.+++.. .+. ...+.|+||+.|-==.. . T Consensus 1 m~--~fATv~Dv~~rwr~Lt~dE~~ra~~LL~dAS~~iR~~~p~~--g~~~~~~~~~~~~-~~~~~k~V~~~mV~Ral~~ 75 (140) T protein:vir:97 1 MG--NFATTDDVILLWRPLSVDELKRANALLKVVSDTLRMEADKV--GKDLDKTMVDKPY-FVNVIKSVTVDIVARTLMT 75 (140) T ss_pred CC--cCCCHHHHHHHhcCCCHhHHHHHHHHHHHHHHHHHHhhhhc--cCCcchhcccCcc-chhHHHHHHHHHHHHHhcC Confidence 22 599999998632 2222348999999999998644311 1122211 222 34555555555422111 1 Q ss_pred CCccccccCccCceeecceEEecccccccccccccccccccchHHHHHHHhhcCceeccCc-ccC Q lcl|Aclame:pro 75 GVMTAEDKQSFAGISLGRTSISYTVGHGQGSQQKTLADRFNLCLDAENELLVVGLGYTGIS-YDR 138 (138) Q Consensus 75 G~~t~~~~~~~~S~siG~tSvS~~~~~~~~~~~~~~~~~~~~s~~a~~~L~~tGLLyrGV~-~~r 138 (138) |.+ .. +.+-.|.++|..|-|++-... .+..-|..+-...|...|=-|.+|+ |.- T Consensus 76 ~~d-~~-G~tq~S~TaG~ys~S~T~~np--------~G~lylt~~e~~~LGl~~~r~~~i~~~g~ 130 (140) T protein:vir:97 76 STQ-GE-PMSQESQSALGYTWSGTYLVP--------GGGLFIKDNELKRLGLKKQRYGGIELYGE 130 (140) T ss_pred CCC-CC-cceeeeeeccchhheeeeecC--------CCCceeChHHHHHhCCCCCceeeecccCc Confidence 211 11 222346789998666432211 2233477777777765555566665 322 No 16 >protein:vir:9576 Length: 131 # NCBI annotation: gp42 # Family: family:all:1271 # MgeID: mge:171 # MgeName: SM1 # Cross-refs: genbank:acc:NP_862881;genbank:gi:32469473;genbank:GeneID:1461318 Probab=89.21 E-value=0.013 Score=30.86 Aligned_cols=124 Identities=15% Similarity=0.040 Sum_probs=68.7 Q ss_pred cccccccCHHHHhcCCCC-Chh---hHHHHHHHHHHHHhHHhcccc-cccCcccccHHHHHHHHHHHHHHHHHHHHcCCc Q lcl|Aclame:pro 3 VVIIAFLTQKEFEDLGFD-DVE---DFEKMEKRASHAVNLYCRNRY-DYKDLKKEIALVQKAVKRAIAYQIAYLNDSGVM 77 (138) Q Consensus 3 ~~~M~Ylt~~eY~~~g~~-~~~---~F~kl~~rAs~~ID~lT~~~~-~~~~~d~~~~~~q~~vKkAvcaQiey~~~~G~~ 77 (138) |. ||+|.++|+..--. .++ -...||..||+.|-.-+...- .-..+..+.|-.+..+|..+|.=+.-.-..+. T Consensus 1 m~--~fAtv~D~~~rwr~Lt~~E~~ra~~LL~~As~~ir~~~p~~~~~l~~~~~~~~~~~~~~~~V~~~~V~Ral~~~~- 77 (131) T protein:vir:95 1 ME--NFATVEDLKKLWRALKFDEEKRAEALLEVVSHSLRVEAKKVGKDLDGLVATDPSFTMVVKSVTVDVVARTLMTST- 77 (131) T ss_pred CC--ccCCHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHhhhhccCCccccccCCccchHHHHHHHHHHHHHHhcCCC- Confidence 22 69999999864322 222 389999999999976443211 11122233333456677777765544333331 Q ss_pred cccccCccCceeecceEEecccccccccccccccccccchHHHHHHHhhcCceeccCc-ccC Q lcl|Aclame:pro 78 TAEDKQSFAGISLGRTSISYTVGHGQGSQQKTLADRFNLCLDAENELLVVGLGYTGIS-YDR 138 (138) Q Consensus 78 t~~~~~~~~S~siG~tSvS~~~~~~~~~~~~~~~~~~~~s~~a~~~L~~tGLLyrGV~-~~r 138 (138) ...+.+-.|.++|..|.|++.... .+..-+..+-...|...|=-|.+|+ |-- T Consensus 78 -~~~G~tq~S~TaG~ys~S~t~~~p--------~g~lylt~~e~~~LGl~~~r~~~i~~~~~ 130 (131) T protein:vir:95 78 -DQEPMTQVAESALGYSFSGSYLVP--------GGGLFIKDSELKRLGLKKQRYGVIDIYGT 130 (131) T ss_pred -CCCCceeeeeecccceeeeeeecC--------CCCceeChHHHHHhCCCCCceeEEeeccC Confidence 111223357889998776543211 2233477777777755555555565 322 No 17 >protein:vir:1640 Length: 132 # NCBI annotation: hypothetical protein # Family: family:all:1271 # MgeID: mge:33 # MgeName: r1t # Cross-refs: genbank:acc:NP_695061;genbank:gi:23455752;genbank:GeneID:955488 Probab=85.97 E-value=0.026 Score=29.23 Aligned_cols=124 Identities=13% Similarity=-0.041 Sum_probs=64.4 Q ss_pred cccccccCHHHHhcCC-CCCh---hhHHHHHHHHHHHHhHHhccccccc--CcccccHHHHHHHHHHHHHHHHHHHHcCC Q lcl|Aclame:pro 3 VVIIAFLTQKEFEDLG-FDDV---EDFEKMEKRASHAVNLYCRNRYDYK--DLKKEIALVQKAVKRAIAYQIAYLNDSGV 76 (138) Q Consensus 3 ~~~M~Ylt~~eY~~~g-~~~~---~~F~kl~~rAs~~ID~lT~~~~~~~--~~d~~~~~~q~~vKkAvcaQiey~~~~G~ 76 (138) |. +|+|.++++..- .-.+ +--..||..||+.|-.-........ .+-.+++.....+|..+|..+.=.-..+. T Consensus 1 m~--~fAtv~Dv~~r~r~L~~~E~~ra~~lL~dAs~~ir~~~p~~~~~l~a~~~e~~~~~~~~~~~V~~~~V~Ral~~~~ 78 (132) T protein:vir:16 1 MN--PFATVDDLTMLWRPLKGDEKERAEKLLEIVSDSLREEADKVGRDLYAMIAEKPSYFASVVKSVTVDIVARTLMTST 78 (132) T ss_pred CC--ccCCHHHHHHHhcCCCHhHHHHHHHHHHHHHHHHHHhhhhhccccccccccccccchhHHHHHHHHHHHHHhcCCC Confidence 22 699999998632 2122 2489999999999975443222211 11123344444555666665554333331 Q ss_pred ccccccCccCceeecceEEecccccccccccccccccccchHHHHHHHhhcCceeccCc-ccC Q lcl|Aclame:pro 77 MTAEDKQSFAGISLGRTSISYTVGHGQGSQQKTLADRFNLCLDAENELLVVGLGYTGIS-YDR 138 (138) Q Consensus 77 ~t~~~~~~~~S~siG~tSvS~~~~~~~~~~~~~~~~~~~~s~~a~~~L~~tGLLyrGV~-~~r 138 (138) . ..+.+-.|.++|..|.|++.... .+...+..+-...|...|=-+..|+ |-- T Consensus 79 ~--~~G~tq~S~TaG~ys~S~t~~~p--------~G~lylt~~e~~~LG~~~~r~~~i~~~~~ 131 (132) T protein:vir:16 79 D--QEPMTQTTESALGYSVSGSYLVP--------GGGLFIKNSELSRLGLKKQRFGVIDFYGN 131 (132) T ss_pred C--CCCceeeeeeccchheeeeeecC--------CCcceeChHHHHhhCCCCCceEEEeecCC Confidence 1 11223346789999776543211 2233477776666643333333343 211 No 18 >protein:vir:94761 Length: 132 # NCBI annotation: unknown # Family: family:all:1271 # MgeID: mge:1529 # MgeName: phi LC3 # Cross-refs: genbank:acc:NP_996708;genbank:gi:45597423;genbank:GeneID:2769029 Probab=84.28 E-value=0.053 Score=27.56 Aligned_cols=124 Identities=14% Similarity=0.007 Sum_probs=62.8 Q ss_pred cccccccCHHHHhcCCC----CChhhHHHHHHHHHHHHhHHhccccccc--CcccccHHHHHHHHHHHHHHHHHHHHcCC Q lcl|Aclame:pro 3 VVIIAFLTQKEFEDLGF----DDVEDFEKMEKRASHAVNLYCRNRYDYK--DLKKEIALVQKAVKRAIAYQIAYLNDSGV 76 (138) Q Consensus 3 ~~~M~Ylt~~eY~~~g~----~~~~~F~kl~~rAs~~ID~lT~~~~~~~--~~d~~~~~~q~~vKkAvcaQiey~~~~G~ 76 (138) |. +|+|.++|+...- ++.+....||..||+.|..-........ .....++.. +.+.|+||+.+-==...-. T Consensus 1 m~--~fAtv~Dl~~r~r~L~~dE~~ra~~LL~dAs~~iR~~~~~~~~~~~~~~~~~~d~~-~~~~k~V~~~~V~Ral~~~ 77 (132) T protein:vir:94 1 MN--PFATVDDLTMLWRPLKGDEKERAEKLLEIVSDTLREEADKVGRDLDVMISEKPSYF-SSVVKSVTVDIVARTLMTS 77 (132) T ss_pred CC--CcCCHHHHHHHhccCChhHHHHHHHHHHHHHHHHHHHHhhhccccccccCCCCccc-hhHHHHHHHHHHHHHhcCC Confidence 22 6999999986432 2223489999999999975433222211 112223332 4555555444322111111 Q ss_pred ccccccCccCceeecceEEecccccccccccccccccccchHHHHHHHhhcCceeccCc-ccC Q lcl|Aclame:pro 77 MTAEDKQSFAGISLGRTSISYTVGHGQGSQQKTLADRFNLCLDAENELLVVGLGYTGIS-YDR 138 (138) Q Consensus 77 ~t~~~~~~~~S~siG~tSvS~~~~~~~~~~~~~~~~~~~~s~~a~~~L~~tGLLyrGV~-~~r 138 (138) ...+ +.+-.|.+.|+.|.|+.-... .+..-|...-...|...|=-|..|+ |-- T Consensus 78 ~~~~-g~tq~S~TaG~ys~S~T~~np--------~G~lylt~~e~~~LGl~~~r~~~i~~~~~ 131 (132) T protein:vir:94 78 TDQE-PMTQTTESALGYSVSGSYLVP--------GGGLFIKNSELSRLGLKKQRFGVIDFYGN 131 (132) T ss_pred CCCC-CceeeeeecccceeeeeeecC--------CCCceeChHHHHhhCCCCCceEEEeecCC Confidence 0011 112246789988776543211 2234477777777754444454555 222 No 19 >protein:vir:107756 Length: 147 # NCBI annotation: gp21 # Family: family:all:664 # MgeID: mge:1520 # MgeName: BcepB1A # Cross-refs: genbank:acc:YP_024869;genbank:gi:48697511;genbank:GeneID:2948377 Probab=76.19 E-value=0.14 Score=25.30 Aligned_cols=123 Identities=15% Similarity=-0.014 Sum_probs=60.4 Q ss_pred CccccccccCHHHHhcCC--CCC----h-hhHHHHHHHHHHHHhHHhcccccccCcccccHHHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 1 MEVVIIAFLTQKEFEDLG--FDD----V-EDFEKMEKRASHAVNLYCRNRYDYKDLKKEIALVQKAVKRAIAYQIAYLND 73 (138) Q Consensus 1 ~~~~~M~Ylt~~eY~~~g--~~~----~-~~F~kl~~rAs~~ID~lT~~~~~~~~~d~~~~~~q~~vKkAvcaQiey~~~ 73 (138) |++. .|.+.|+... |.+ | +.+..++..|...||.-... -+.+-..++..+-.-+| .+-.+.. T Consensus 1 m~v~----fd~~~Fr~~fPeFad~~~~pd~~i~~~l~~A~~~l~~~~~~------~~~~g~~~~~~l~Ll~A-Hll~l~~ 69 (147) T protein:vir:10 1 MDHT----LDITKFRALFPEFNNDVKYPDALLEQWYAVAGEYLGLTDYA------CGLNGNTLDLALMQLTA-HLMKSAT 69 (147) T ss_pred Ccee----cCHHHHHHhcccccCCccCCHHHHHHHHHHHHHhhccccCC------cccChhhHHHHHHHHHH-HHHHHHH Confidence 7775 7888887642 222 2 34788888888877643321 11122444444444444 3333322 Q ss_pred cCCccccccCccCceeecceEEecccccccccccccccccccch---HHHHHHHhhc--CceeccCcccC Q lcl|Aclame:pro 74 SGVMTAEDKQSFAGISLGRTSISYTVGHGQGSQQKTLADRFNLC---LDAENELLVV--GLGYTGISYDR 138 (138) Q Consensus 74 ~G~~t~~~~~~~~S~siG~tSvS~~~~~~~~~~~~~~~~~~~~s---~~a~~~L~~t--GLLyrGV~~~r 138 (138) .-..-....+.++|.|+|++||||......+.... =++.+ .+-..+++.- |-.+-|=..-| T Consensus 70 ~~~~g~g~~G~v~Sas~G~VSVSy~~~~~~~~~~~----w~~~T~YGq~y~~l~~~~~~Gg~vvgG~p~r 135 (147) T protein:vir:10 70 ILSSNKGAPMVMTSATIDKVSISTLAPPIKNGWQY----WLSTTPYGQMLWALLSMRSSGGFVYGGSPEL 135 (147) T ss_pred hhccCCCcccceeeeeecceeeeeecCCCCCcchh----hhhcCHHHHHHHHHHHhhCccceecCCCCcc Confidence 11000112346899999999999964322211111 01111 1223344444 43555555555 No 20 >protein:vir:5976 Length: 102 # NCBI annotation: hypothetical protein # Family: family:all:789 # ACLAME annotation(s): phi:0000067 - phage portal associated protein # MgeID: mge:125 # MgeName: SPP1 # Cross-refs: genbank:acc:NP_690676;genbank:geneid:6329129;genbank:gi:22855070;uniprot:Q38584;genbank:GeneID:955305 Probab=72.38 E-value=0.13 Score=25.47 Aligned_cols=97 Identities=11% Similarity=0.071 Sum_probs=63.3 Q ss_pred cCHHHHhc-CCCCCh---hhHHHHHHHHHHHHhHHhccccc-ccCcccccHHHHHHHHHHHHHHHHHHHHcCCccccccC Q lcl|Aclame:pro 9 LTQKEFED-LGFDDV---EDFEKMEKRASHAVNLYCRNRYD-YKDLKKEIALVQKAVKRAIAYQIAYLNDSGVMTAEDKQ 83 (138) Q Consensus 9 lt~~eY~~-~g~~~~---~~F~kl~~rAs~~ID~lT~~~~~-~~~~d~~~~~~q~~vKkAvcaQiey~~~~G~~t~~~~~ 83 (138) .+.+.=|- +|.++. +.+.+|...=-+.+--+||+.+. +.|-..+|. -|||.+|-=|+|.... . T Consensus 1 Md~~~VK~ll~i~~~s~d~~i~~lip~y~e~aedyCN~~F~dkdg~~~lP~----gVkkfvAe~ik~y~~~--------~ 68 (102) T protein:vir:59 1 MDIQRVKRLLSITNDKHDEYLTEMVPLLVEFAKDECHNPFIDKDGNESIPS----GVLIFVAKAAQFYMTN--------A 68 (102) T ss_pred CChHHhhhhhcCCCCccHHHHHHHHHHHHHHHHHHhCCccccccccccCCc----cHHHHHHHHHHhcCCC--------C Confidence 23333333 465543 34777776666666667876654 444445554 4678888778862222 3 Q ss_pred ccCceeecceEEecccccccccccccccccccchHHHHHHHhhcCceec Q lcl|Aclame:pro 84 SFAGISLGRTSISYTVGHGQGSQQKTLADRFNLCLDAENELLVVGLGYT 132 (138) Q Consensus 84 ~~~S~siG~tSvS~~~~~~~~~~~~~~~~~~~~s~~a~~~L~~tGLLyr 132 (138) .++|-|.|-+|++|.. -+...++.+|.|.-=|.| T Consensus 69 nissRsMgtVSYty~T---------------~iP~~i~~~L~PyRrl~~ 102 (102) T protein:vir:59 69 GLTGRSMDTVSYNFAT---------------EIPSTILKKLNPYRKMAR 102 (102) T ss_pred Ccccccccceeeechh---------------hhhHHHHHHhhHHHhhcC Confidence 6889999999998853 256668899999888888 No 21 >protein:vir:1271 Length: 115 # NCBI annotation: hypothetical protein # Family: family:all:316 # MgeID: mge:329 # MgeName: phi-105 # Cross-refs: genbank:acc:NP_690763;genbank:gi:22855003;genbank:GeneID:955211 Probab=71.06 E-value=0.2 Score=24.44 Aligned_cols=87 Identities=8% Similarity=0.034 Sum_probs=52.0 Q ss_pred cCHHHHhc-CCC--CCh-hhHHHHHHHHHHHHhHHhcccccccCcccccHHHHHHHHHHHHHHHHHHHHcCCccccccCc Q lcl|Aclame:pro 9 LTQKEFED-LGF--DDV-EDFEKMEKRASHAVNLYCRNRYDYKDLKKEIALVQKAVKRAIAYQIAYLNDSGVMTAEDKQS 84 (138) Q Consensus 9 lt~~eY~~-~g~--~~~-~~F~kl~~rAs~~ID~lT~~~~~~~~~d~~~~~~q~~vKkAvcaQiey~~~~G~~t~~~~~~ 84 (138) +|-++-|. +-+ ++. +-..-++.-|++.|...|+.++.. ...+|.|+...|.+++++-......... T Consensus 1 ltLeevK~~LRID~ddDD~lI~~li~AA~~yi~~~~g~~~e~----------~~~~~~Avl~Lv~~~YeNRe~~~~~~~~ 70 (115) T protein:vir:12 1 MDLEAIKNYLKVEHEEDDRQLLNQMAAAKSYIINGIGRYIEG----------HPQFELVLQMLVQHWYENKGIYETGGTG 70 (115) T ss_pred CCHHHHHHHcCCCCccchHHHHHHHHHHHHHHHHHhCCCCCC----------chhHHHHHHHHHHHHHhcccccccccch Confidence 78888876 333 322 238899999999999998866532 1368999999999999987432111100 Q ss_pred cCceeecceEEecccccccccccccccccccchHHHHHHHhhcCceeccCcccC Q lcl|Aclame:pro 85 FAGISLGRTSISYTVGHGQGSQQKTLADRFNLCLDAENELLVVGLGYTGISYDR 138 (138) Q Consensus 85 ~~S~siG~tSvS~~~~~~~~~~~~~~~~~~~~s~~a~~~L~~tGLLyrGV~~~r 138 (138) . .+...+..+|.+ |||+..+- T Consensus 71 -~----------------------------~lp~~v~sll~~----lR~~~~~~ 91 (115) T protein:vir:12 71 -L----------------------------SIPFTAENILTQ----LRYVSVEE 91 (115) T ss_pred -h----------------------------hhhHHHHHHHHH----hhcccCCc Confidence 0 022224444444 33333222 No 22 >protein:vir:741 Length: 110 # NCBI annotation: unknown # Family: family:all:372 # MgeID: mge:14 # MgeName: Tuc2009 # Cross-refs: genbank:acc:NP_108718;genbank:gi:13487840;genbank:GeneID:920873 Probab=69.90 E-value=0.22 Score=24.23 Aligned_cols=106 Identities=21% Similarity=0.201 Sum_probs=61.9 Q ss_pred ccccCHHHHhc-CCCCChhhHHHHHHHHHHHHhHHhcccccccCcccccHHHHHHHHHHHHHHHHHHHHcCCccccccCc Q lcl|Aclame:pro 6 IAFLTQKEFED-LGFDDVEDFEKMEKRASHAVNLYCRNRYDYKDLKKEIALVQKAVKRAIAYQIAYLNDSGVMTAEDKQS 84 (138) Q Consensus 6 M~Ylt~~eY~~-~g~~~~~~F~kl~~rAs~~ID~lT~~~~~~~~~d~~~~~~q~~vKkAvcaQiey~~~~G~~t~~~~~~ 84 (138) |..| +.-|- +|..+.+-+.-++++|++.|=..++-- ...++..-++++.. -|+.. ++..|. + . T Consensus 1 M~~L--~~vK~~lgi~~D~lL~~li~~a~~~i~~~l~~~--~~~iP~~l~~iv~e--vav~r----yNR~g~---E---G 64 (110) T protein:vir:74 1 MAIT--YEIKKLLGGSSDERLEIIEKRTRERLLLILGSD--LKEVPPELEYVVLD--VSLKR----FNRIGQ---E---G 64 (110) T ss_pred ChHH--HHHHHHcCCChhHHHHHHHHHHHHHHHHHhCCC--hhhhhHHHHHHHHH--HHHHH----hcccCc---c---c Confidence 4333 66764 677654558999999999988876521 11233323343322 23332 556663 3 3 Q ss_pred cCceeecceEEecccccccccccccccccccchHHHHHHHhhc-CceeccCcccC Q lcl|Aclame:pro 85 FAGISLGRTSISYTVGHGQGSQQKTLADRFNLCLDAENELLVV-GLGYTGISYDR 138 (138) Q Consensus 85 ~~S~siG~tSvS~~~~~~~~~~~~~~~~~~~~s~~a~~~L~~t-GLLyrGV~~~r 138 (138) .+|.|.++.|+||..+-.. ..-.+.-.|+... +-.-+|+...| T Consensus 65 ~~S~SeeG~S~sf~~~d~~-----------~y~~~l~~y~~~~~~~~~~~~~~~~ 108 (110) T protein:vir:74 65 MQSYSQEGLSMTFSESDFD-----------EYADEIESRRKSKETEGDKKIGRFR 108 (110) T ss_pred cceeecCCeeeeecccchh-----------hHHHHHHHHHhhccccccCcceeee Confidence 5799999999999642210 1233444555443 45678888888 No 23 >protein:vir:97329 Length: 104 # NCBI annotation: ORF048 # Family: family:all:789 # ACLAME annotation(s): phi:0000067 - phage portal associated protein # MgeID: mge:1666 # MgeName: 52A # Cross-refs: genbank:acc:YP_240613;genbank:gi:66396311;genbank:GeneID:5133685 Probab=68.37 E-value=0.24 Score=24.00 Aligned_cols=101 Identities=22% Similarity=0.291 Sum_probs=58.1 Q ss_pred ccccCHHHHhcCCCCCh---hhHHHHHHHHHHHHhHHhcccccccCcccccHHHHHHHHHHHHHHHHHHHHcCCcccccc Q lcl|Aclame:pro 6 IAFLTQKEFEDLGFDDV---EDFEKMEKRASHAVNLYCRNRYDYKDLKKEIALVQKAVKRAIAYQIAYLNDSGVMTAEDK 82 (138) Q Consensus 6 M~Ylt~~eY~~~g~~~~---~~F~kl~~rAs~~ID~lT~~~~~~~~~d~~~~~~q~~vKkAvcaQiey~~~~G~~t~~~~ 82 (138) |.=.+..--..+..++. +.|+.+.+.=-+.+--+||..+... .+|. -|||++|-=|+| | .. T Consensus 1 Md~~dVK~l~~~~~~d~~~D~~~~~li~~y~e~aedyCn~~F~~~---~lP~----gV~~fvA~~iky----~-----~~ 64 (104) T protein:vir:97 1 MDTKDVKMINGLSLNDSSNDEQIEYLIEEYKSVAEDYCNQKFDDK---AVPS----GVKKFIAECIKF----G-----TT 64 (104) T ss_pred CCHHHHHHHhCCCCCCcccHHHHHHHHHHHHHHHHHhcCCCCCCC---CCCc----cHHHHHHHHHhh----C-----CC Confidence 32223333333444432 3477777766666666777665322 3333 467777777777 2 24 Q ss_pred CccCceeecceEEecccccccccccccccccccchHHHHHHHhhcCceeccCccc Q lcl|Aclame:pro 83 QSFAGISLGRTSISYTVGHGQGSQQKTLADRFNLCLDAENELLVVGLGYTGISYD 137 (138) Q Consensus 83 ~~~~S~siG~tSvS~~~~~~~~~~~~~~~~~~~~s~~a~~~L~~tGLLyrGV~~~ 137 (138) +.++|-|.|-+|++|.. .+...++++|.|.-=|=-|=-|+ T Consensus 65 ~NissRSMGtVSYty~t---------------~iP~~i~~~LkPYRklr~~~~~~ 104 (104) T protein:vir:97 65 GNISARTMGTVSYTYVT---------------DIPSSAYAYLMPYRKLSWGKRYV 104 (104) T ss_pred CCcccccccceeecccc---------------hhHHHHHHhhhhhhhhcccccCC Confidence 47899999999998853 15566888998843222121122 No 24 >protein:vir:94798 Length: 104 # NCBI annotation: ORF043 # Family: family:all:789 # ACLAME annotation(s): phi:0000067 - phage portal associated protein # MgeID: mge:1531 # MgeName: 29 # Cross-refs: genbank:acc:YP_240538;genbank:gi:66396233;genbank:GeneID:5133578 Probab=68.12 E-value=0.24 Score=23.96 Aligned_cols=101 Identities=22% Similarity=0.289 Sum_probs=58.1 Q ss_pred ccccCHHHHhcCCCCCh---hhHHHHHHHHHHHHhHHhcccccccCcccccHHHHHHHHHHHHHHHHHHHHcCCcccccc Q lcl|Aclame:pro 6 IAFLTQKEFEDLGFDDV---EDFEKMEKRASHAVNLYCRNRYDYKDLKKEIALVQKAVKRAIAYQIAYLNDSGVMTAEDK 82 (138) Q Consensus 6 M~Ylt~~eY~~~g~~~~---~~F~kl~~rAs~~ID~lT~~~~~~~~~d~~~~~~q~~vKkAvcaQiey~~~~G~~t~~~~ 82 (138) |.=.+..--..+..++. +.|+.+.+.=-+.+--+||..+... .+|. -|||++|-=|+| | .. T Consensus 1 Md~~dVK~l~~~~~~d~~~D~~~~~li~~y~e~aedyCn~~F~~~---~lP~----gVk~fvA~~iky----~-----~~ 64 (104) T protein:vir:94 1 MDTKDVKMINGLSLNDSSNDEQIEYLIEEYKSVAEDYCNQKFDDK---AVPS----GVKKFIAECIKF----G-----TT 64 (104) T ss_pred CCHHHHHHHhCCCCCCcccHHHHHHHHHHHHHHHHHhcCCCCCCC---CCCc----cHHHHHHHHHhh----C-----CC Confidence 32223333333444432 3477777766666666777665322 3333 467777777777 2 24 Q ss_pred CccCceeecceEEecccccccccccccccccccchHHHHHHHhhcCceeccCccc Q lcl|Aclame:pro 83 QSFAGISLGRTSISYTVGHGQGSQQKTLADRFNLCLDAENELLVVGLGYTGISYD 137 (138) Q Consensus 83 ~~~~S~siG~tSvS~~~~~~~~~~~~~~~~~~~~s~~a~~~L~~tGLLyrGV~~~ 137 (138) +.++|-|.|-+|++|.. .+...++++|.|.-=|=-|=-|+ T Consensus 65 ~NissRSMGtVSYTy~T---------------~iP~~i~~~LkPYRklr~~~~~~ 104 (104) T protein:vir:94 65 GNISARTMGTVSYTYIT---------------DIPSSAYAYLMPYRKLSWGKRYV 104 (104) T ss_pred CCcccccccceeecccc---------------hhHHHHHHhhhhhhhhcccccCC Confidence 47899999999998853 15566888998843222121122 No 25 >protein:vir:107119 Length: 104 # NCBI annotation: conserved phage protein # Family: family:all:789 # ACLAME annotation(s): phi:0000067 - phage portal associated protein # MgeID: mge:1571 # MgeName: CNPH82 # Cross-refs: genbank:acc:YP_950608;genbank:gi:119953688;genbank:GeneID:4643128 Probab=68.05 E-value=0.24 Score=23.95 Aligned_cols=100 Identities=20% Similarity=0.275 Sum_probs=58.1 Q ss_pred ccccCHHHHhcCCCCCh---hhHHHHHHHHHHHHhHHhcccccccCcccccHHHHHHHHHHHHHHHHHHHHcCCcccccc Q lcl|Aclame:pro 6 IAFLTQKEFEDLGFDDV---EDFEKMEKRASHAVNLYCRNRYDYKDLKKEIALVQKAVKRAIAYQIAYLNDSGVMTAEDK 82 (138) Q Consensus 6 M~Ylt~~eY~~~g~~~~---~~F~kl~~rAs~~ID~lT~~~~~~~~~d~~~~~~q~~vKkAvcaQiey~~~~G~~t~~~~ 82 (138) |.=.+..--..+..++. +.|+.+.+.=-+.+--+||..+... .+|. -|||++|-=|+| + .. T Consensus 1 Md~~dVK~l~~~~~~d~~~D~~~~~li~~y~e~aedyCn~~F~~~---~lP~----gV~~fvA~~iky----~-----~~ 64 (104) T protein:vir:10 1 MNAQDVKLLNNLSLDDTSNDETIELLIEKYLNVAEEYCNQTFNRK---SLPS----NVEKFIANCIKQ----G-----TT 64 (104) T ss_pred CCHHHHHHHhCCCCCCcccHHHHHHHHHHHHHHHHHhcCCCCCCC---CCCc----cHHHHHHHHHhh----c-----CC Confidence 32223333333444432 3477777766666666777665322 2333 467888777777 2 13 Q ss_pred CccCceeecceEEecccccccccccccccccccchHHHHHHHhhcCce-eccCccc Q lcl|Aclame:pro 83 QSFAGISLGRTSISYTVGHGQGSQQKTLADRFNLCLDAENELLVVGLG-YTGISYD 137 (138) Q Consensus 83 ~~~~S~siG~tSvS~~~~~~~~~~~~~~~~~~~~s~~a~~~L~~tGLL-yrGV~~~ 137 (138) +.++|-|.|-+|++|.. .+...++++|.|.-=| +.| -|+ T Consensus 65 ~NissRSMGtVSyTy~t---------------~iP~~i~~~L~PYRklr~~~-~~~ 104 (104) T protein:vir:10 65 SNISSRTMGTVSYTFVT---------------DLPKETYGYLKPFRRLRWTG-YHV 104 (104) T ss_pred CCcccccccceeecccc---------------hhHHHHHHhhhhhhhhcccc-ccC Confidence 46899999999998853 1556688899884322 222 122 No 26 >protein:vir:105327 Length: 104 # NCBI annotation: putative head morphogenesis protein # Family: family:all:789 # ACLAME annotation(s): phi:0000067 - phage portal associated protein # MgeID: mge:1679 # MgeName: PH15 # Cross-refs: genbank:acc:YP_950671;genbank:gi:119967841;genbank:GeneID:4643206 Probab=68.05 E-value=0.24 Score=23.95 Aligned_cols=100 Identities=20% Similarity=0.275 Sum_probs=58.1 Q ss_pred ccccCHHHHhcCCCCCh---hhHHHHHHHHHHHHhHHhcccccccCcccccHHHHHHHHHHHHHHHHHHHHcCCcccccc Q lcl|Aclame:pro 6 IAFLTQKEFEDLGFDDV---EDFEKMEKRASHAVNLYCRNRYDYKDLKKEIALVQKAVKRAIAYQIAYLNDSGVMTAEDK 82 (138) Q Consensus 6 M~Ylt~~eY~~~g~~~~---~~F~kl~~rAs~~ID~lT~~~~~~~~~d~~~~~~q~~vKkAvcaQiey~~~~G~~t~~~~ 82 (138) |.=.+..--..+..++. +.|+.+.+.=-+.+--+||..+... .+|. -|||++|-=|+| + .. T Consensus 1 Md~~dVK~l~~~~~~d~~~D~~~~~li~~y~e~aedyCn~~F~~~---~lP~----gV~~fvA~~iky----~-----~~ 64 (104) T protein:vir:10 1 MNAQDVKLLNNLSLDDTSNDETIELLIEKYLNVAEEYCNQTFNRK---SLPS----NVEKFIANCIKQ----G-----TT 64 (104) T ss_pred CCHHHHHHHhCCCCCCcccHHHHHHHHHHHHHHHHHhcCCCCCCC---CCCc----cHHHHHHHHHhh----c-----CC Confidence 32223333333444432 3477777766666666777665322 2333 467888777777 2 13 Q ss_pred CccCceeecceEEecccccccccccccccccccchHHHHHHHhhcCce-eccCccc Q lcl|Aclame:pro 83 QSFAGISLGRTSISYTVGHGQGSQQKTLADRFNLCLDAENELLVVGLG-YTGISYD 137 (138) Q Consensus 83 ~~~~S~siG~tSvS~~~~~~~~~~~~~~~~~~~~s~~a~~~L~~tGLL-yrGV~~~ 137 (138) +.++|-|.|-+|++|.. .+...++++|.|.-=| +.| -|+ T Consensus 65 ~NissRSMGtVSyTy~t---------------~iP~~i~~~L~PYRklr~~~-~~~ 104 (104) T protein:vir:10 65 SNISSRTMGTVSYTFVT---------------DLPKETYGYLKPFRRLRWTG-YHV 104 (104) T ss_pred CCcccccccceeecccc---------------hhHHHHHHhhhhhhhhcccc-ccC Confidence 46899999999998853 1556688899884322 222 122 No 27 >protein:vir:96281 Length: 104 # NCBI annotation: ORF047 # Family: family:all:789 # ACLAME annotation(s): phi:0000067 - phage portal associated protein # MgeID: mge:1612 # MgeName: ROSA # Cross-refs: genbank:acc:YP_240313;genbank:gi:66396008;genbank:GeneID:5133358 Probab=67.42 E-value=0.25 Score=23.86 Aligned_cols=100 Identities=21% Similarity=0.299 Sum_probs=58.0 Q ss_pred ccccCHHHHhcCCCCCh---hhHHHHHHHHHHHHhHHhcccccccCcccccHHHHHHHHHHHHHHHHHHHHcCCcccccc Q lcl|Aclame:pro 6 IAFLTQKEFEDLGFDDV---EDFEKMEKRASHAVNLYCRNRYDYKDLKKEIALVQKAVKRAIAYQIAYLNDSGVMTAEDK 82 (138) Q Consensus 6 M~Ylt~~eY~~~g~~~~---~~F~kl~~rAs~~ID~lT~~~~~~~~~d~~~~~~q~~vKkAvcaQiey~~~~G~~t~~~~ 82 (138) |.=.+..--..+..++. +.|+.+.+.=-+.+--+||..+... .+|. -|||++|-=|+| | .. T Consensus 1 Md~~dVK~l~~~~~~d~~~D~~~~~li~~y~e~aedyCn~~F~~~---~lP~----gV~~fvA~~iky----~-----~~ 64 (104) T protein:vir:96 1 MDAKDVKMINGLSLNDSSNDEQIKYLIEEYKSVAEDYCNQKFDDK---AVPS----GVKKFIAECIKF----G-----TT 64 (104) T ss_pred CCHHHHHHHhCCCCCCcccHHHHHHHHHHHHHHHHHhcCCCCCCC---CCCc----cHHHHHHHHHhh----C-----CC Confidence 32223333333444432 3477777766666666777665322 3333 467777777777 2 24 Q ss_pred CccCceeecceEEecccccccccccccccccccchHHHHHHHhhcCce-eccCccc Q lcl|Aclame:pro 83 QSFAGISLGRTSISYTVGHGQGSQQKTLADRFNLCLDAENELLVVGLG-YTGISYD 137 (138) Q Consensus 83 ~~~~S~siG~tSvS~~~~~~~~~~~~~~~~~~~~s~~a~~~L~~tGLL-yrGV~~~ 137 (138) +.++|-|.|-+|++|.. .+...++++|.|.-=| +.| -|+ T Consensus 65 ~NissRSMGtVSYTy~t---------------~iP~~i~~~LkPYRklr~~~-~~~ 104 (104) T protein:vir:96 65 GNISARTMGTVSYTYVT---------------DIPSSAYAYLLPYRKLSWGK-RYV 104 (104) T ss_pred CCcccccccceeecccc---------------hhHHHHHHhhhhhhhhcccc-cCC Confidence 47899999999998853 1556688899884322 222 122 No 28 >protein:vir:95891 Length: 104 # NCBI annotation: ORF051 # Family: family:all:789 # ACLAME annotation(s): phi:0000067 - phage portal associated protein # MgeID: mge:1588 # MgeName: 71 # Cross-refs: genbank:acc:YP_240387;genbank:gi:66396087;genbank:GeneID:5133402 Probab=67.42 E-value=0.25 Score=23.86 Aligned_cols=100 Identities=21% Similarity=0.299 Sum_probs=58.0 Q ss_pred ccccCHHHHhcCCCCCh---hhHHHHHHHHHHHHhHHhcccccccCcccccHHHHHHHHHHHHHHHHHHHHcCCcccccc Q lcl|Aclame:pro 6 IAFLTQKEFEDLGFDDV---EDFEKMEKRASHAVNLYCRNRYDYKDLKKEIALVQKAVKRAIAYQIAYLNDSGVMTAEDK 82 (138) Q Consensus 6 M~Ylt~~eY~~~g~~~~---~~F~kl~~rAs~~ID~lT~~~~~~~~~d~~~~~~q~~vKkAvcaQiey~~~~G~~t~~~~ 82 (138) |.=.+..--..+..++. +.|+.+.+.=-+.+--+||..+... .+|. -|||++|-=|+| | .. T Consensus 1 Md~~dVK~l~~~~~~d~~~D~~~~~li~~y~e~aedyCn~~F~~~---~lP~----gV~~fvA~~iky----~-----~~ 64 (104) T protein:vir:95 1 MDAKDVKMINGLSLNDSSNDEQIKYLIEEYKSVAEDYCNQKFDDK---AVPS----GVKKFIAECIKF----G-----TT 64 (104) T ss_pred CCHHHHHHHhCCCCCCcccHHHHHHHHHHHHHHHHHhcCCCCCCC---CCCc----cHHHHHHHHHhh----C-----CC Confidence 32223333333444432 3477777766666666777665322 3333 467777777777 2 24 Q ss_pred CccCceeecceEEecccccccccccccccccccchHHHHHHHhhcCce-eccCccc Q lcl|Aclame:pro 83 QSFAGISLGRTSISYTVGHGQGSQQKTLADRFNLCLDAENELLVVGLG-YTGISYD 137 (138) Q Consensus 83 ~~~~S~siG~tSvS~~~~~~~~~~~~~~~~~~~~s~~a~~~L~~tGLL-yrGV~~~ 137 (138) +.++|-|.|-+|++|.. .+...++++|.|.-=| +.| -|+ T Consensus 65 ~NissRSMGtVSYTy~t---------------~iP~~i~~~LkPYRklr~~~-~~~ 104 (104) T protein:vir:95 65 GNISARTMGTVSYTYVT---------------DIPSSAYAYLLPYRKLSWGK-RYV 104 (104) T ss_pred CCcccccccceeecccc---------------hhHHHHHHhhhhhhhhcccc-cCC Confidence 47899999999998853 1556688899884322 222 122 No 29 >protein:vir:81159 Length: 95 # NCBI annotation: putative DNA packaging protein # Family: family:all:316 # MgeID: mge:1892 # MgeName: Geobacillus virus E2 # Cross-refs: genbank:acc:YP_001285813;genbank:gi:148747734;genbank:GeneID:5247202 Probab=65.75 E-value=0.079 Score=26.62 Aligned_cols=91 Identities=12% Similarity=0.098 Sum_probs=54.3 Q ss_pred ccccCHHHHhc-CCC--CChh-hHHHHHHHHHHHHhHHhcccccccCcccccHHHHHHHHHHHHHHHHHHHHcCCccccc Q lcl|Aclame:pro 6 IAFLTQKEFED-LGF--DDVE-DFEKMEKRASHAVNLYCRNRYDYKDLKKEIALVQKAVKRAIAYQIAYLNDSGVMTAED 81 (138) Q Consensus 6 M~Ylt~~eY~~-~g~--~~~~-~F~kl~~rAs~~ID~lT~~~~~~~~~d~~~~~~q~~vKkAvcaQiey~~~~G~~t~~~ 81 (138) |..+|-++-|. +-. ++.+ -..-+++-|+..|-..++..+ +.. ...+|.|++..+.+++++-..+... T Consensus 1 Mm~vtLee~K~~LRID~d~dD~lI~~li~aA~~~i~~~~g~~~-----~~~----~~~~~~Avl~lv~~~YeNRe~~~~~ 71 (95) T protein:vir:81 1 MMIVTLEEVKNWLRVDFSDDDALITTLINAAEEYLKNATGTTF-----DAT----NHLAKIFCMTLIADWYENRELVGRA 71 (95) T ss_pred CCcCCHHHHHHHcCCCCCcchHHHHHHHHHHHHHHHHhhcccc-----ccC----chHHHHHHHHHHHHHHhhccccccc Confidence 88999999987 333 3322 378899999999999987443 222 2578999999999999987532211 Q ss_pred cCccCceeecceEEecccccccccccccccccccchHHHHHHHhhcCceeccCcc Q lcl|Aclame:pro 82 KQSFAGISLGRTSISYTVGHGQGSQQKTLADRFNLCLDAENELLVVGLGYTGISY 136 (138) Q Consensus 82 ~~~~~S~siG~tSvS~~~~~~~~~~~~~~~~~~~~s~~a~~~L~~tGLLyrGV~~ 136 (138) .. . +...+..+|.+-=-.|.|=.- T Consensus 72 ~~----------~---------------------~p~~v~sll~~lr~~~~~~~~ 95 (95) T protein:vir:81 72 SD----------Q---------------------VRPILQSILAQLTYAYGGETA 95 (95) T ss_pred cc----------c---------------------ccHHHHHHHHHhhhccccccC Confidence 10 0 111233334333222222111 No 30 >protein:vir:79050 Length: 133 # NCBI annotation: hypothetical protein # Family: family:all:6416 # MgeID: mge:1861 # MgeName: phiC2 # Cross-refs: genbank:acc:YP_001110727;genbank:gi:134287344;genbank:GeneID:4955224 Probab=65.63 E-value=0.21 Score=24.33 Aligned_cols=120 Identities=16% Similarity=0.265 Sum_probs=60.7 Q ss_pred CccccccccCHHHHhcCCCCChhh----HHHHHHHHHHHHhHHhcccccccCcccccHHHH-HHHHHHHHHHHHHHHHcC Q lcl|Aclame:pro 1 MEVVIIAFLTQKEFEDLGFDDVED----FEKMEKRASHAVNLYCRNRYDYKDLKKEIALVQ-KAVKRAIAYQIAYLNDSG 75 (138) Q Consensus 1 ~~~~~M~Ylt~~eY~~~g~~~~~~----F~kl~~rAs~~ID~lT~~~~~~~~~d~~~~~~q-~~vKkAvcaQiey~~~~G 75 (138) |-...|.=+ .+-.|.+|+...++ +.=.+..++..|-..|| ++..|+-.. -.++.|+..=+.--...| T Consensus 1 ~~~~i~e~i-~~~Lk~~~~~~~~~d~~iL~fa~e~~~n~I~N~cN-------i~eiP~~L~~v~~~mai~~fl~~kk~~~ 72 (133) T protein:vir:79 1 MGNNIIDDI-EKRLESFGYILKDGDKWLIDFVREKIENIIKLDCN-------IKTMPIELKEIEADMIVGEFLFTKKNMG 72 (133) T ss_pred CCchHHHHH-HHHHHHhCCCCCccchHHHHHHHHHHHHHHhhhcC-------hhhcchhHHHHHHHHHHHHHHhcccccC Confidence 544444222 23344566654322 33344555555655665 456665444 488999885332222222 Q ss_pred Ccc-cc-c-cCccCceeecceEEecccccccccccccccccccchHHHHHHHhhcCceecc--CcccC Q lcl|Aclame:pro 76 VMT-AE-D-KQSFAGISLGRTSISYTVGHGQGSQQKTLADRFNLCLDAENELLVVGLGYTG--ISYDR 138 (138) Q Consensus 76 ~~t-~~-~-~~~~~S~siG~tSvS~~~~~~~~~~~~~~~~~~~~s~~a~~~L~~tGLLyrG--V~~~r 138 (138) ... +. + ...++|++.|.|||+|+.+.++-+. .++ -...+++|..-| |. .+|-| T Consensus 73 ~~~l~~~D~~~~v~sIkeGDTsv~f~~~~~s~t~----eq~---l~s~i~~L~~~~---k~~l~~yRk 130 (133) T protein:vir:79 73 QLDIESINFEAVEKSISEGDTKVDFAIGSGSQTP----EQR---FDSLIAYLTAYG---KNKILTFRC 130 (133) T ss_pred CCCcccccchhhhhheecccceeecccCCCccch----hHH---HHHHHHHHhhcc---cchhhcccc Confidence 211 11 1 2347999999999999765542111 111 135677776543 11 33434 No 31 >protein:vir:3970 Length: 110 # NCBI annotation: hypothetical protein # Family: family:all:372 # MgeID: mge:83 # MgeName: ul36 # Cross-refs: genbank:acc:NP_663678;genbank:gi:21716115;genbank:GeneID:951203 Probab=63.56 E-value=0.32 Score=23.33 Aligned_cols=106 Identities=20% Similarity=0.206 Sum_probs=61.0 Q ss_pred ccccCHHHHhc-CCCCChhhHHHHHHHHHHHHhHHhcccccccCcccccHHHHHHHHHHHHHHHHHHHHcCCccccccCc Q lcl|Aclame:pro 6 IAFLTQKEFED-LGFDDVEDFEKMEKRASHAVNLYCRNRYDYKDLKKEIALVQKAVKRAIAYQIAYLNDSGVMTAEDKQS 84 (138) Q Consensus 6 M~Ylt~~eY~~-~g~~~~~~F~kl~~rAs~~ID~lT~~~~~~~~~d~~~~~~q~~vKkAvcaQiey~~~~G~~t~~~~~~ 84 (138) |.. -+.-|- +|....+-+.-++++|++.|=.+++-.+. .++..-++++. .-|+.. ++..|. + . T Consensus 1 M~i--L~~vK~~lgi~~D~lL~~li~~a~~~i~~~l~~~~~--~iP~~l~~iv~--evav~r----yNR~g~---E---G 64 (110) T protein:vir:39 1 MAI--TDDLKKLLGGSSDERLEVIEKRTRERLLLILSSNIK--EVPPELEYVVL--DVSLKR----FNRIGQ---E---G 64 (110) T ss_pred Cch--HHHHHHhcCCChhHHHHHHHHHHHHHHHHHhCCChh--hhhhHHHHHHH--HHHHHH----hccccc---c---c Confidence 433 266764 67765455999999999999888773221 23333334332 223332 455652 3 3 Q ss_pred cCceeecceEEecccccccccccccccccccchHHHHHHHhh-cCceeccCcccC Q lcl|Aclame:pro 85 FAGISLGRTSISYTVGHGQGSQQKTLADRFNLCLDAENELLV-VGLGYTGISYDR 138 (138) Q Consensus 85 ~~S~siG~tSvS~~~~~~~~~~~~~~~~~~~~s~~a~~~L~~-tGLLyrGV~~~r 138 (138) .+|.|.|+.|+||..+-. .. .-.+.-.|+.. .+-.-+|++-.| T Consensus 65 ~~S~SeeG~S~sf~~~d~---------~~--y~~~l~~y~~~~~~~~~~~~g~~~ 108 (110) T protein:vir:39 65 MQSYSQEGLSMTFSESDF---------DE--YADEIESWRKSKETEGDKKIGRFR 108 (110) T ss_pred cceeecCCeeeeecccCc---------ch--hHHHHHHHhhhccccccCcceeee Confidence 579999999999964211 01 22333445443 344557788788 No 32 >protein:vir:93740 Length: 104 # NCBI annotation: ORF047 # Family: family:all:789 # ACLAME annotation(s): phi:0000067 - phage portal associated protein # MgeID: mge:1475 # MgeName: 55 # Cross-refs: genbank:acc:YP_240461;genbank:gi:66396159;genbank:GeneID:5133509 Probab=59.69 E-value=0.36 Score=23.02 Aligned_cols=101 Identities=22% Similarity=0.307 Sum_probs=58.6 Q ss_pred ccccCHHHHhcCCCCCh---hhHHHHHHHHHHHHhHHhcccccccCcccccHHHHHHHHHHHHHHHHHHHHcCCcccccc Q lcl|Aclame:pro 6 IAFLTQKEFEDLGFDDV---EDFEKMEKRASHAVNLYCRNRYDYKDLKKEIALVQKAVKRAIAYQIAYLNDSGVMTAEDK 82 (138) Q Consensus 6 M~Ylt~~eY~~~g~~~~---~~F~kl~~rAs~~ID~lT~~~~~~~~~d~~~~~~q~~vKkAvcaQiey~~~~G~~t~~~~ 82 (138) |.=.+..--..+..++. +.|+.+.+.=-+.+--+||+.+.... + ..-|||.+|-=|+| | .. T Consensus 1 Md~~dVK~l~~~~~~d~~~D~~~~~li~~y~e~aedyCN~~F~~~~---l----P~gVkkfvAe~iky----~-----~~ 64 (104) T protein:vir:93 1 MDAKDVKMINGLSLNDSSNDEQIDYLIEEYKSVAEDYCNQKFDDKE---V----PSGVKKFIAECIKF----G-----TT 64 (104) T ss_pred CCHHHHHHHhCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCCCCcc---C----CccHHHHHHHHHhh----C-----CC Confidence 32223333333444432 34877777666666667876653221 2 23577888777777 2 24 Q ss_pred CccCceeecceEEecccccccccccccccccccchHHHHHHHhhcCceeccCccc Q lcl|Aclame:pro 83 QSFAGISLGRTSISYTVGHGQGSQQKTLADRFNLCLDAENELLVVGLGYTGISYD 137 (138) Q Consensus 83 ~~~~S~siG~tSvS~~~~~~~~~~~~~~~~~~~~s~~a~~~L~~tGLLyrGV~~~ 137 (138) +.++|-|.|-+|++|.. -+...++.+|.|.-=|--|=-|+ T Consensus 65 ~NissRsMgtVSYTy~T---------------~iP~~i~~~L~PYRrlrw~~~~~ 104 (104) T protein:vir:93 65 GNISARTMGTVSYTYVT---------------DIPSSAYAYLLPYRKLSWGKRYV 104 (104) T ss_pred CCcccccccceeeechh---------------hhhHHHHHhhhhhhhhcccccCC Confidence 47899999999998853 15556788888754332222233 No 33 >protein:vir:1241 Length: 104 # NCBI annotation: similar to phage Spp1 gp15 (product required for head morphogenesis) # Family: family:all:789 # ACLAME annotation(s): phi:0000067 - phage portal associated protein # MgeID: mge:25 # MgeName: phi ETA # Cross-refs: genbank:acc:NP_510940;genbank:gi:17426274;genbank:GeneID:927373 Probab=59.48 E-value=0.36 Score=22.99 Aligned_cols=101 Identities=23% Similarity=0.310 Sum_probs=58.7 Q ss_pred ccccCHHHHhcCCCCCh---hhHHHHHHHHHHHHhHHhcccccccCcccccHHHHHHHHHHHHHHHHHHHHcCCcccccc Q lcl|Aclame:pro 6 IAFLTQKEFEDLGFDDV---EDFEKMEKRASHAVNLYCRNRYDYKDLKKEIALVQKAVKRAIAYQIAYLNDSGVMTAEDK 82 (138) Q Consensus 6 M~Ylt~~eY~~~g~~~~---~~F~kl~~rAs~~ID~lT~~~~~~~~~d~~~~~~q~~vKkAvcaQiey~~~~G~~t~~~~ 82 (138) |.=.+..--..+..++. +.|+.+.+.=-+.+--+||+.+.... + ..-|||.+|-=|+| | .. T Consensus 1 Md~~dVK~l~~~~~~d~~~D~~~~~li~~y~e~aedyCN~~F~~~~---l----P~gVkkfvAe~iky----~-----~~ 64 (104) T protein:vir:12 1 MDAKDVKMINGLSLNDSSDDEQIEYLIEEYKSVAEDYCNQKFDDKE---V----PSGVKKFIAECIKF----G-----TT 64 (104) T ss_pred CCHHHHHHHhCCCCCCCccHHHHHHHHHHHHHHHHHHhCCCCCCcc---C----CccHHHHHHHHHhh----C-----CC Confidence 32223333333444322 34877777666666667876653221 2 23577888777777 2 24 Q ss_pred CccCceeecceEEecccccccccccccccccccchHHHHHHHhhcCceeccCccc Q lcl|Aclame:pro 83 QSFAGISLGRTSISYTVGHGQGSQQKTLADRFNLCLDAENELLVVGLGYTGISYD 137 (138) Q Consensus 83 ~~~~S~siG~tSvS~~~~~~~~~~~~~~~~~~~~s~~a~~~L~~tGLLyrGV~~~ 137 (138) +.++|-|.|-+|++|.. -+...++++|.|.-=|--|=-|+ T Consensus 65 ~NissRsMgtVSYTy~T---------------~iP~~i~~~L~PYRrlrw~~~~~ 104 (104) T protein:vir:12 65 GNISARTMGTVSYTYVT---------------DIPSSAYAYLLPYRKLSWGKRYV 104 (104) T ss_pred CCcccccccceeeechh---------------hhhHHHHHhhhhhhhhcccccCC Confidence 47899999999998853 15556788888754332222233 No 34 >protein:vir:105005 Length: 96 # NCBI annotation: putative DNA packaging protein phage # Family: family:all:316 # MgeID: mge:1490 # MgeName: W Beta # Cross-refs: genbank:acc:YP_459970;genbank:gi:85701385;genbank:GeneID:3882146 Probab=59.41 E-value=0.11 Score=25.77 Aligned_cols=92 Identities=12% Similarity=0.123 Sum_probs=51.6 Q ss_pred cccccccCHHHHhc-CCC--CChhhHHHHHHHHHHHHhHHhcccccccCcccccHHHHHHHHHHHHHHHHHHHHcCCccc Q lcl|Aclame:pro 3 VVIIAFLTQKEFED-LGF--DDVEDFEKMEKRASHAVNLYCRNRYDYKDLKKEIALVQKAVKRAIAYQIAYLNDSGVMTA 79 (138) Q Consensus 3 ~~~M~Ylt~~eY~~-~g~--~~~~~F~kl~~rAs~~ID~lT~~~~~~~~~d~~~~~~q~~vKkAvcaQiey~~~~G~~t~ 79 (138) |. +|-++-|. +-+ ++.+-...++.-|+..|-..++.. |+..+ ..+|.|++..|.+++++-.... T Consensus 1 M~----vtLee~K~~LRID~DdD~lI~~~i~aA~~~i~~~~g~~-----~~e~~----~~~k~Avl~lv~~~YenR~~~~ 67 (96) T protein:vir:10 1 ML----VTLEEAKEWIRVDGDDDPTITMLIKAAELYIYKATGKT-----FTQTN----EDAKLLCLFLVADWYGNRLLVG 67 (96) T ss_pred Cc----CCHHHHHHHcCCCCchhHHHHHHHHHHHHHHHHhhCCC-----CCCCc----chHHHHHHHHHHHHHhhhhhcc Confidence 44 89998886 333 332237889999999998887643 22222 3589999999999999874332 Q ss_pred cccCccCceeecceEEecccccccccccccccccccchHHHHHHHhhcCceeccCcccC Q lcl|Aclame:pro 80 EDKQSFAGISLGRTSISYTVGHGQGSQQKTLADRFNLCLDAENELLVVGLGYTGISYDR 138 (138) Q Consensus 80 ~~~~~~~S~siG~tSvS~~~~~~~~~~~~~~~~~~~~s~~a~~~L~~tGLLyrGV~~~r 138 (138) ..... .+...+..+|.+-=..| +...++ T Consensus 68 ~~~~~------------------------------~ip~~v~sli~qLr~~~-~~~~e~ 95 (96) T protein:vir:10 68 EKASE------------------------------KIRTIVQSMILQLQYAS-EPQEER 95 (96) T ss_pred ccccc------------------------------hhhHHHHHHHHHHhhcC-Cccccc Confidence 21110 01122333443321122 222333 No 35 >protein:vir:102863 Length: 96 # NCBI annotation: conserved phage protein # Family: family:all:316 # MgeID: mge:1492 # MgeName: Cherry # Cross-refs: genbank:acc:YP_338138;genbank:gi:77020236;genbank:GeneID:3703772 Probab=59.41 E-value=0.11 Score=25.77 Aligned_cols=92 Identities=12% Similarity=0.123 Sum_probs=51.6 Q ss_pred cccccccCHHHHhc-CCC--CChhhHHHHHHHHHHHHhHHhcccccccCcccccHHHHHHHHHHHHHHHHHHHHcCCccc Q lcl|Aclame:pro 3 VVIIAFLTQKEFED-LGF--DDVEDFEKMEKRASHAVNLYCRNRYDYKDLKKEIALVQKAVKRAIAYQIAYLNDSGVMTA 79 (138) Q Consensus 3 ~~~M~Ylt~~eY~~-~g~--~~~~~F~kl~~rAs~~ID~lT~~~~~~~~~d~~~~~~q~~vKkAvcaQiey~~~~G~~t~ 79 (138) |. +|-++-|. +-+ ++.+-...++.-|+..|-..++.. |+..+ ..+|.|++..|.+++++-.... T Consensus 1 M~----vtLee~K~~LRID~DdD~lI~~~i~aA~~~i~~~~g~~-----~~e~~----~~~k~Avl~lv~~~YenR~~~~ 67 (96) T protein:vir:10 1 ML----VTLEEAKEWIRVDGDDDPTITMLIKAAELYIYKATGKT-----FTQTN----EDAKLLCLFLVADWYGNRLLVG 67 (96) T ss_pred Cc----CCHHHHHHHcCCCCchhHHHHHHHHHHHHHHHHhhCCC-----CCCCc----chHHHHHHHHHHHHHhhhhhcc Confidence 44 89998886 333 332237889999999998887643 22222 3589999999999999874332 Q ss_pred cccCccCceeecceEEecccccccccccccccccccchHHHHHHHhhcCceeccCcccC Q lcl|Aclame:pro 80 EDKQSFAGISLGRTSISYTVGHGQGSQQKTLADRFNLCLDAENELLVVGLGYTGISYDR 138 (138) Q Consensus 80 ~~~~~~~S~siG~tSvS~~~~~~~~~~~~~~~~~~~~s~~a~~~L~~tGLLyrGV~~~r 138 (138) ..... .+...+..+|.+-=..| +...++ T Consensus 68 ~~~~~------------------------------~ip~~v~sli~qLr~~~-~~~~e~ 95 (96) T protein:vir:10 68 EKASE------------------------------KIRTIVQSMILQLQYAS-EPQEER 95 (96) T ss_pred ccccc------------------------------hhhHHHHHHHHHHhhcC-Cccccc Confidence 21110 01122333443321122 222333 No 36 >protein:vir:107614 Length: 96 # NCBI annotation: conserved phage protein # Family: family:all:316 # MgeID: mge:1491 # MgeName: Gamma # Cross-refs: genbank:acc:YP_338189;genbank:gi:77020184;genbank:GeneID:3703745 Probab=59.41 E-value=0.11 Score=25.77 Aligned_cols=92 Identities=12% Similarity=0.123 Sum_probs=51.6 Q ss_pred cccccccCHHHHhc-CCC--CChhhHHHHHHHHHHHHhHHhcccccccCcccccHHHHHHHHHHHHHHHHHHHHcCCccc Q lcl|Aclame:pro 3 VVIIAFLTQKEFED-LGF--DDVEDFEKMEKRASHAVNLYCRNRYDYKDLKKEIALVQKAVKRAIAYQIAYLNDSGVMTA 79 (138) Q Consensus 3 ~~~M~Ylt~~eY~~-~g~--~~~~~F~kl~~rAs~~ID~lT~~~~~~~~~d~~~~~~q~~vKkAvcaQiey~~~~G~~t~ 79 (138) |. +|-++-|. +-+ ++.+-...++.-|+..|-..++.. |+..+ ..+|.|++..|.+++++-.... T Consensus 1 M~----vtLee~K~~LRID~DdD~lI~~~i~aA~~~i~~~~g~~-----~~e~~----~~~k~Avl~lv~~~YenR~~~~ 67 (96) T protein:vir:10 1 ML----VTLEEAKEWIRVDGDDDPTITMLIKAAELYIYKATGKT-----FTQTN----EDAKLLCLFLVADWYGNRLLVG 67 (96) T ss_pred Cc----CCHHHHHHHcCCCCchhHHHHHHHHHHHHHHHHhhCCC-----CCCCc----chHHHHHHHHHHHHHhhhhhcc Confidence 44 89998886 333 332237889999999998887643 22222 3589999999999999874332 Q ss_pred cccCccCceeecceEEecccccccccccccccccccchHHHHHHHhhcCceeccCcccC Q lcl|Aclame:pro 80 EDKQSFAGISLGRTSISYTVGHGQGSQQKTLADRFNLCLDAENELLVVGLGYTGISYDR 138 (138) Q Consensus 80 ~~~~~~~S~siG~tSvS~~~~~~~~~~~~~~~~~~~~s~~a~~~L~~tGLLyrGV~~~r 138 (138) ..... .+...+..+|.+-=..| +...++ T Consensus 68 ~~~~~------------------------------~ip~~v~sli~qLr~~~-~~~~e~ 95 (96) T protein:vir:10 68 EKASE------------------------------KIRTIVQSMILQLQYAS-EPQEER 95 (96) T ss_pred ccccc------------------------------hhhHHHHHHHHHHhhcC-Cccccc Confidence 21110 01122333443321122 222333 No 37 >protein:vir:102083 Length: 96 # NCBI annotation: DNA packaging protein # Family: family:all:316 # MgeID: mge:1503 # MgeName: Fah # Cross-refs: genbank:acc:YP_512316;genbank:gi:89152485;genbank:GeneID:3953076 Probab=59.41 E-value=0.11 Score=25.77 Aligned_cols=92 Identities=12% Similarity=0.123 Sum_probs=51.6 Q ss_pred cccccccCHHHHhc-CCC--CChhhHHHHHHHHHHHHhHHhcccccccCcccccHHHHHHHHHHHHHHHHHHHHcCCccc Q lcl|Aclame:pro 3 VVIIAFLTQKEFED-LGF--DDVEDFEKMEKRASHAVNLYCRNRYDYKDLKKEIALVQKAVKRAIAYQIAYLNDSGVMTA 79 (138) Q Consensus 3 ~~~M~Ylt~~eY~~-~g~--~~~~~F~kl~~rAs~~ID~lT~~~~~~~~~d~~~~~~q~~vKkAvcaQiey~~~~G~~t~ 79 (138) |. +|-++-|. +-+ ++.+-...++.-|+..|-..++.. |+..+ ..+|.|++..|.+++++-.... T Consensus 1 M~----vtLee~K~~LRID~DdD~lI~~~i~aA~~~i~~~~g~~-----~~e~~----~~~k~Avl~lv~~~YenR~~~~ 67 (96) T protein:vir:10 1 ML----VTLEEAKEWIRVDGDDDPTITMLIKAAELYIYKATGKT-----FTQTN----EDAKLLCLFLVADWYGNRLLVG 67 (96) T ss_pred Cc----CCHHHHHHHcCCCCchhHHHHHHHHHHHHHHHHhhCCC-----CCCCc----chHHHHHHHHHHHHHhhhhhcc Confidence 44 89998886 333 332237889999999998887643 22222 3589999999999999874332 Q ss_pred cccCccCceeecceEEecccccccccccccccccccchHHHHHHHhhcCceeccCcccC Q lcl|Aclame:pro 80 EDKQSFAGISLGRTSISYTVGHGQGSQQKTLADRFNLCLDAENELLVVGLGYTGISYDR 138 (138) Q Consensus 80 ~~~~~~~S~siG~tSvS~~~~~~~~~~~~~~~~~~~~s~~a~~~L~~tGLLyrGV~~~r 138 (138) ..... .+...+..+|.+-=..| +...++ T Consensus 68 ~~~~~------------------------------~ip~~v~sli~qLr~~~-~~~~e~ 95 (96) T protein:vir:10 68 EKASE------------------------------KIRTIVQSMILQLQYAS-EPQEER 95 (96) T ss_pred ccccc------------------------------hhhHHHHHHHHHHhhcC-Cccccc Confidence 21110 01122333443321122 222333 No 38 >protein:vir:97430 Length: 104 # NCBI annotation: ORF051 # Family: family:all:789 # ACLAME annotation(s): phi:0000067 - phage portal associated protein # MgeID: mge:1676 # MgeName: 92 # Cross-refs: genbank:acc:YP_240751;genbank:gi:66396455;genbank:GeneID:5133786 Probab=59.38 E-value=0.37 Score=22.96 Aligned_cols=101 Identities=23% Similarity=0.306 Sum_probs=58.6 Q ss_pred ccccCHHHHhcCCCCCh---hhHHHHHHHHHHHHhHHhcccccccCcccccHHHHHHHHHHHHHHHHHHHHcCCcccccc Q lcl|Aclame:pro 6 IAFLTQKEFEDLGFDDV---EDFEKMEKRASHAVNLYCRNRYDYKDLKKEIALVQKAVKRAIAYQIAYLNDSGVMTAEDK 82 (138) Q Consensus 6 M~Ylt~~eY~~~g~~~~---~~F~kl~~rAs~~ID~lT~~~~~~~~~d~~~~~~q~~vKkAvcaQiey~~~~G~~t~~~~ 82 (138) |.=.+..--..+..++. +.|+.+.+.=-+.+--+||+.+.... + ..-|||.+|-=|+| | .. T Consensus 1 Md~~dVK~l~~~~~~d~~~D~~~~~li~~y~e~aedyCN~~F~~~~---l----P~gVkkfvAe~iky----~-----~~ 64 (104) T protein:vir:97 1 MDAKDVKMINGLSLNDSSNDEQIEYLIEEYKGVAEDYCNQKFDDKE---V----PSGVKKFIAECIKF----G-----TT 64 (104) T ss_pred CCHHHHHHHhCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCCCCcc---C----CccHHHHHHHHHhh----C-----CC Confidence 32223333333444432 34777777666666667876653221 2 23577888777777 2 24 Q ss_pred CccCceeecceEEecccccccccccccccccccchHHHHHHHhhcCceeccCccc Q lcl|Aclame:pro 83 QSFAGISLGRTSISYTVGHGQGSQQKTLADRFNLCLDAENELLVVGLGYTGISYD 137 (138) Q Consensus 83 ~~~~S~siG~tSvS~~~~~~~~~~~~~~~~~~~~s~~a~~~L~~tGLLyrGV~~~ 137 (138) +.++|-|.|-+|++|.. -+...++.+|.|.-=|--|=-|+ T Consensus 65 ~NissRsMgtVSYTy~T---------------~iP~~i~~~L~PYRrlrw~~~~~ 104 (104) T protein:vir:97 65 GNISARTMGTVSYTYVT---------------DIPSSAYAYLLPYRKLSWGKRYV 104 (104) T ss_pred CCcccccccceeeechh---------------hhhHHHHHhhhhhhhhcccccCC Confidence 47899999999998853 15556788888754332222233 No 39 >protein:vir:94492 Length: 104 # NCBI annotation: ORF049 # Family: family:all:789 # ACLAME annotation(s): phi:0000067 - phage portal associated protein # MgeID: mge:1508 # MgeName: 88 # Cross-refs: genbank:acc:YP_240678;genbank:gi:66396380;genbank:GeneID:5133756 Probab=59.38 E-value=0.37 Score=22.96 Aligned_cols=101 Identities=23% Similarity=0.306 Sum_probs=58.6 Q ss_pred ccccCHHHHhcCCCCCh---hhHHHHHHHHHHHHhHHhcccccccCcccccHHHHHHHHHHHHHHHHHHHHcCCcccccc Q lcl|Aclame:pro 6 IAFLTQKEFEDLGFDDV---EDFEKMEKRASHAVNLYCRNRYDYKDLKKEIALVQKAVKRAIAYQIAYLNDSGVMTAEDK 82 (138) Q Consensus 6 M~Ylt~~eY~~~g~~~~---~~F~kl~~rAs~~ID~lT~~~~~~~~~d~~~~~~q~~vKkAvcaQiey~~~~G~~t~~~~ 82 (138) |.=.+..--..+..++. +.|+.+.+.=-+.+--+||+.+.... + ..-|||.+|-=|+| | .. T Consensus 1 Md~~dVK~l~~~~~~d~~~D~~~~~li~~y~e~aedyCN~~F~~~~---l----P~gVkkfvAe~iky----~-----~~ 64 (104) T protein:vir:94 1 MDAKDVKMINGLSLNDSSNDEQIEYLIEEYKGVAEDYCNQKFDDKE---V----PSGVKKFIAECIKF----G-----TT 64 (104) T ss_pred CCHHHHHHHhCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCCCCcc---C----CccHHHHHHHHHhh----C-----CC Confidence 32223333333444432 34777777666666667876653221 2 23577888777777 2 24 Q ss_pred CccCceeecceEEecccccccccccccccccccchHHHHHHHhhcCceeccCccc Q lcl|Aclame:pro 83 QSFAGISLGRTSISYTVGHGQGSQQKTLADRFNLCLDAENELLVVGLGYTGISYD 137 (138) Q Consensus 83 ~~~~S~siG~tSvS~~~~~~~~~~~~~~~~~~~~s~~a~~~L~~tGLLyrGV~~~ 137 (138) +.++|-|.|-+|++|.. -+...++.+|.|.-=|--|=-|+ T Consensus 65 ~NissRsMgtVSYTy~T---------------~iP~~i~~~L~PYRrlrw~~~~~ 104 (104) T protein:vir:94 65 GNISARTMGTVSYTYVT---------------DIPSSAYAYLLPYRKLSWGKRYV 104 (104) T ss_pred CCcccccccceeeechh---------------hhhHHHHHhhhhhhhhcccccCC Confidence 47899999999998853 15556788888754332222233 No 40 >protein:vir:95071 Length: 104 # NCBI annotation: ORF050 # Family: family:all:789 # ACLAME annotation(s): phi:0000067 - phage portal associated protein # MgeID: mge:1549 # MgeName: X2 # Cross-refs: genbank:acc:YP_240825;genbank:gi:66394717;genbank:GeneID:5133865 Probab=59.26 E-value=0.37 Score=22.94 Aligned_cols=101 Identities=22% Similarity=0.306 Sum_probs=58.7 Q ss_pred ccccCHHHHhcCCCCCh---hhHHHHHHHHHHHHhHHhcccccccCcccccHHHHHHHHHHHHHHHHHHHHcCCcccccc Q lcl|Aclame:pro 6 IAFLTQKEFEDLGFDDV---EDFEKMEKRASHAVNLYCRNRYDYKDLKKEIALVQKAVKRAIAYQIAYLNDSGVMTAEDK 82 (138) Q Consensus 6 M~Ylt~~eY~~~g~~~~---~~F~kl~~rAs~~ID~lT~~~~~~~~~d~~~~~~q~~vKkAvcaQiey~~~~G~~t~~~~ 82 (138) |.=.+..--..+..++. +.|+.+.+.=-+.+--+||+.+.... + ..-|||.+|-=|+| | .. T Consensus 1 Md~~dVK~l~~~~~~d~~~D~~~~~li~~y~e~aedyCN~~F~~~~---l----P~gVkkfvAe~iky----~-----~~ 64 (104) T protein:vir:95 1 MDAKDVKMINGLSLNDSSNDEQIEYLIEEYKSVAEDYCNQKFDDKE---V----PSGVKKFIAECIKF----G-----TT 64 (104) T ss_pred CCHHHHHHHhCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCCCCcc---C----CccHHHHHHHHHhh----C-----CC Confidence 32223333333444432 34777777666666667876653221 2 23577888777777 2 24 Q ss_pred CccCceeecceEEecccccccccccccccccccchHHHHHHHhhcCceeccCccc Q lcl|Aclame:pro 83 QSFAGISLGRTSISYTVGHGQGSQQKTLADRFNLCLDAENELLVVGLGYTGISYD 137 (138) Q Consensus 83 ~~~~S~siG~tSvS~~~~~~~~~~~~~~~~~~~~s~~a~~~L~~tGLLyrGV~~~ 137 (138) +.++|-|.|-+|++|.. -+...++.+|.|.-=|--|=-|+ T Consensus 65 ~NissRsMgtVSYTy~T---------------~iP~~i~~~L~PYRrlrw~~~~~ 104 (104) T protein:vir:95 65 GNISARTMGTVSYTYVT---------------DIPSSAYAYLMPYRKLSWGKRYV 104 (104) T ss_pred CCcccccccceeeechh---------------hhhHHHHHhhhhhhhhcccccCC Confidence 47899999999998853 15556888888754332222233 No 41 >protein:vir:5256 Length: 119 # NCBI annotation: hypothetical protein # Family: family:all:664 # MgeID: mge:117 # MgeName: Aaphi23 # Cross-refs: genbank:acc:NP_852761;genbank:gi:31544036;uniprot:Q7Y5T9;genbank:GeneID:2753553 Probab=59.17 E-value=0.4 Score=22.78 Aligned_cols=113 Identities=14% Similarity=0.138 Sum_probs=51.0 Q ss_pred ccCHHHHhcCC--CCC-h-hhHHHHHHHHHHHHhHHhcccccccCcccccHHHHHHHHHHHHHHHHHHHHcCCcccc-cc Q lcl|Aclame:pro 8 FLTQKEFEDLG--FDD-V-EDFEKMEKRASHAVNLYCRNRYDYKDLKKEIALVQKAVKRAIAYQIAYLNDSGVMTAE-DK 82 (138) Q Consensus 8 Ylt~~eY~~~g--~~~-~-~~F~kl~~rAs~~ID~lT~~~~~~~~~d~~~~~~q~~vKkAvcaQiey~~~~G~~t~~-~~ 82 (138) -.|.+.|+... |.+ | +.++-++.-|...|+. + +. .++.+..+ ....|.+-.+...+..... .. T Consensus 1 m~t~~~Fr~~~PeF~~~pd~~i~~~l~~A~~~l~~-~--~~--------g~~~~~~~-~L~~AH~l~l~~~~~~~~g~~~ 68 (119) T protein:vir:52 1 MPLTEDFLLRYTEFGKTDAKRIGLFLSDAQAEVSK-V--QW--------GKLYDRGV-MALTAHLLKLSADAEISGGAAN 68 (119) T ss_pred CCcHHHHHHhhhhccCCCHHHHHHHHHHHHHhhCC-c--CC--------chHHHHHH-HHHHHHHHHhhhhhhccccccc Confidence 14557776532 222 2 3488889999888874 1 11 12222222 2233333222222211111 13 Q ss_pred CccCceeecceEEecccccccccccccccccccchHHHHHHHhhcCc-eeccCc Q lcl|Aclame:pro 83 QSFAGISLGRTSISYTVGHGQGSQQKTLADRFNLCLDAENELLVVGL-GYTGIS 135 (138) Q Consensus 83 ~~~~S~siG~tSvS~~~~~~~~~~~~~~~~~~~~s~~a~~~L~~tGL-LyrGV~ 135 (138) +.++|.|+|++||||......+..+.--++. .=-.+-..+++..|. -+ |. T Consensus 69 g~v~S~s~G~vSvS~~~~~~~~~~~~w~~~T-~YG~~y~~L~r~~g~Gg~--Va 119 (119) T protein:vir:52 69 RNLASESAGELSVSYTAPISANGSDDFYQLT-AYGQEYLRLRRLIGVGVM--VA 119 (119) T ss_pred cceeeeeecceeeeeeccccCCcchhhhhcC-HHHHHHHHHHHHhcCCCc--CC Confidence 5689999999999985432222111111000 011233445555554 11 33 No 42 >protein:vir:96128 Length: 98 # NCBI annotation: ORF050 # Family: family:all:789 # ACLAME annotation(s): phi:0000067 - phage portal associated protein # MgeID: mge:1602 # MgeName: 37 # Cross-refs: genbank:acc:YP_240080;genbank:gi:66395776;genbank:GeneID:5133109 Probab=56.08 E-value=0.36 Score=23.00 Aligned_cols=95 Identities=16% Similarity=0.265 Sum_probs=58.1 Q ss_pred ccccCHHHHhcCCCCChh---hHHHHHHHHHHHHhHHhcccccccCcccccHHHHHHHHHHHHHHHHHHHHcCCcccccc Q lcl|Aclame:pro 6 IAFLTQKEFEDLGFDDVE---DFEKMEKRASHAVNLYCRNRYDYKDLKKEIALVQKAVKRAIAYQIAYLNDSGVMTAEDK 82 (138) Q Consensus 6 M~Ylt~~eY~~~g~~~~~---~F~kl~~rAs~~ID~lT~~~~~~~~~d~~~~~~q~~vKkAvcaQiey~~~~G~~t~~~~ 82 (138) |.=.+..--+.++.++.+ .|+.+.+.=-+.+--+||..+. +.-| .-|||.+|-=|+| | .. T Consensus 1 Md~~dVK~ln~~~i~~~~~d~~~~~li~~y~e~aedyCN~~F~-----k~lP---~gVkkfiAe~iky----~-----~~ 63 (98) T protein:vir:96 1 MEPKEVKQLNLMPIEDTSNDDVLGDLIKFYKGIAEEYCNKTFE-----APYP---FGVRKFIAECIKY----G-----TN 63 (98) T ss_pred CchHHhHHhhcccCCCcchHHHHHHHHHHHHHHHHHHhCCccc-----ccCC---ccHHHHHHHHHhh----C-----CC Confidence 333333334556666542 3777777666666667776653 2222 3577778777777 2 24 Q ss_pred CccCceeecceEEecccccccccccccccccccchHHHHHHHhhcCceeccCcc Q lcl|Aclame:pro 83 QSFAGISLGRTSISYTVGHGQGSQQKTLADRFNLCLDAENELLVVGLGYTGISY 136 (138) Q Consensus 83 ~~~~S~siG~tSvS~~~~~~~~~~~~~~~~~~~~s~~a~~~L~~tGLLyrGV~~ 136 (138) +.++|-|.|-+|++|.. -+...++.+|.|.- =.-. T Consensus 64 ~nissRsMgtVSYty~T---------------~iP~~i~~~L~PyR----rlrw 98 (98) T protein:vir:96 64 SNVSSRTMGTVSYTFVT---------------DLPKATYRHLKPFR----RLRW 98 (98) T ss_pred CCcccccccceeeechh---------------hhhHHHHHHhhhhh----hccC Confidence 47899999999998853 15556888888732 1111 No 43 >protein:vir:100245 Length: 113 # NCBI annotation: gp74 # Family: family:all:363 # MgeID: mge:1619 # MgeName: Bcep176 # Cross-refs: genbank:acc:YP_355410;genbank:gi:77864700;genbank:GeneID:3725967 Probab=54.46 E-value=0.14 Score=25.27 Aligned_cols=98 Identities=18% Similarity=0.075 Sum_probs=56.5 Q ss_pred ccccCHHHHhc-CCCC--Ch-hhHHHHHHHHHHHHhHHhccccccc-----------CcccccHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 6 IAFLTQKEFED-LGFD--DV-EDFEKMEKRASHAVNLYCRNRYDYK-----------DLKKEIALVQKAVKRAIAYQIAY 70 (138) Q Consensus 6 M~Ylt~~eY~~-~g~~--~~-~~F~kl~~rAs~~ID~lT~~~~~~~-----------~~d~~~~~~q~~vKkAvcaQiey 70 (138) |+++|-++-|. +-.+ +. +-...++.-|++.|=..|+..+... .-..+...+-..||.|+-.-+.+ T Consensus 1 M~~vtLee~K~hLRvd~d~dD~lI~~li~AA~~~ve~~l~r~l~~~~~~~~~~~~~~~~~~~~~~~p~~i~~AvLllv~~ 80 (113) T protein:vir:10 1 MALVELKLALGFVRANAGVEDDVVQMLLDAATQSAVDYLNRQVFETEDAMTTAIEAGTAGQNPMVVNAAIRAAILKITAE 80 (113) T ss_pred CCCCCHHHHHHHcCCCCCcchHHHHHHHHHHHHHHHHHhCccccccccccccccccccccccccccChHHHHHHHHHHHH Confidence 99999999987 4333 22 2388999999999999988654211 01111112346789999999999 Q ss_pred HHHcCCccccccCccCceeecceEEecccccccccccccccccccchHHHHHHHhhcCceeccC Q lcl|Aclame:pro 71 LNDSGVMTAEDKQSFAGISLGRTSISYTVGHGQGSQQKTLADRFNLCLDAENELLVVGLGYTGI 134 (138) Q Consensus 71 ~~~~G~~t~~~~~~~~S~siG~tSvS~~~~~~~~~~~~~~~~~~~~s~~a~~~L~~tGLLyrGV 134 (138) ++++-....... ++ .+...+..+|.+.= .+.|| T Consensus 81 ~Y~nRe~~~~~~------------~~------------------~lP~~v~~Ll~~yR-~~~g~ 113 (113) T protein:vir:10 81 LYANREDTAFGP------------IT------------------ELPLNARALLRPHR-IIPGV 113 (113) T ss_pred HHhhhhhhchhh------------hh------------------ccCHHHHHHHHHhh-hhcCC Confidence 999864221110 00 01112333443311 23455 No 44 >protein:vir:3615 Length: 110 # NCBI annotation: ORF38 # Family: family:all:372 # MgeID: mge:74 # MgeName: TP901-1 # Cross-refs: genbank:acc:NP_112701;genbank:gi:13786569;genbank:GeneID:921067 Probab=54.38 E-value=0.5 Score=22.21 Aligned_cols=106 Identities=21% Similarity=0.194 Sum_probs=61.2 Q ss_pred CccccccccCHHHHhc-CCCCChhhHHHHHHHHHHHHhHHhcccccccCcccccHHHHHHHHHHHHHHHHHHHHcCCccc Q lcl|Aclame:pro 1 MEVVIIAFLTQKEFED-LGFDDVEDFEKMEKRASHAVNLYCRNRYDYKDLKKEIALVQKAVKRAIAYQIAYLNDSGVMTA 79 (138) Q Consensus 1 ~~~~~M~Ylt~~eY~~-~g~~~~~~F~kl~~rAs~~ID~lT~~~~~~~~~d~~~~~~q~~vKkAvcaQiey~~~~G~~t~ 79 (138) |+.+ +.-|- +|..+.+-+.-++++|++.|=..|+--+ ..++..-++++. .-||.. ++..| . T Consensus 1 M~~L-------~~vK~~lg~~~D~lL~~li~~a~~~i~~~~~~~~--~eiP~~l~~iv~--evav~r----yNR~g---~ 62 (110) T protein:vir:36 1 MAIT-------DDLKMLLGGSLDERLEVIEKRTRDRLLLILGSDI--KEVPPELEYVVL--DVSLKR----FNRIG---Q 62 (110) T ss_pred ChhH-------HHHHhhcCCChhHHHHHHHHHHHHHHHHHhCCCh--hhhhhHHHHHHH--HHHHHH----hcccc---c Confidence 3333 56664 5665545589999999999988887321 123322234332 223332 45666 2 Q ss_pred cccCccCceeecceEEecccccccccccccccccccchHHHHHHHhhcC-ceeccCcccC Q lcl|Aclame:pro 80 EDKQSFAGISLGRTSISYTVGHGQGSQQKTLADRFNLCLDAENELLVVG-LGYTGISYDR 138 (138) Q Consensus 80 ~~~~~~~S~siG~tSvS~~~~~~~~~~~~~~~~~~~~s~~a~~~L~~tG-LLyrGV~~~r 138 (138) + ..+|.|.|+.|+||..+-. .. .-.+.-.|+.... ---+|++-.| T Consensus 63 E---G~~S~SeeG~S~sf~~~d~---------~~--y~~~l~~y~~~~~~~~~~~~g~~~ 108 (110) T protein:vir:36 63 E---GMQSYSQEGLSMTFSESDF---------DE--YADEIESWRKSRETEGDKKIGRFR 108 (110) T ss_pred c---ccceeecCCceeeecccCc---------ch--HHHHHHHHHhhhccccCCcceeee Confidence 3 3579999999999964211 01 2334445655433 3557777778 No 45 >protein:vir:192 Length: 108 # NCBI annotation: Gp6 # Family: family:all:6764 # MgeID: mge:6 # MgeName: HK97 # Cross-refs: genbank:acc:NP_037702;genbank:gi:9634167;genbank:GeneID:1262532 Probab=53.69 E-value=0.52 Score=22.13 Aligned_cols=101 Identities=18% Similarity=0.212 Sum_probs=61.5 Q ss_pred CccccccccCHHHHhc-CCCC--Ch-hhHHHHHHHHHHHHhHHhcccccccCcccccHHHHHHHHHHHHHHHHHHHHcCC Q lcl|Aclame:pro 1 MEVVIIAFLTQKEFED-LGFD--DV-EDFEKMEKRASHAVNLYCRNRYDYKDLKKEIALVQKAVKRAIAYQIAYLNDSGV 76 (138) Q Consensus 1 ~~~~~M~Ylt~~eY~~-~g~~--~~-~~F~kl~~rAs~~ID~lT~~~~~~~~~d~~~~~~q~~vKkAvcaQiey~~~~G~ 76 (138) |-|-.|+++|-++-|. +-++ +. +....++.-|++.|-..++... ...+.-....||.|+..=|.+++++-. T Consensus 1 ~~~~~M~~vtLee~K~hLRid~dddD~lI~~~i~AA~~~v~~~~~~~~-----~~~~~~~p~~ik~AiLllv~~~YenRE 75 (108) T protein:vir:19 1 MAIDVLDVISLSLFKQQIEFEEDDRDELITLYAQAAFDYCMRWCDEPA-----WKVAADIPAAVKGAVLLVFADMFEHRT 75 (108) T ss_pred CCCCcccccCHHHHHHHcCCCCCcchHHHHHHHHHHHHHHHHHhCCcc-----cccccccchHHHHHHHHHHHHHHhccc Confidence 9999999999999987 4333 22 2378999999999988776432 111222345789999999999998874 Q ss_pred ccccccCccCceeecceEEecccccccccccccccccccchHHHHHHHhhcCceeccCcccC Q lcl|Aclame:pro 77 MTAEDKQSFAGISLGRTSISYTVGHGQGSQQKTLADRFNLCLDAENELLVVGLGYTGISYDR 138 (138) Q Consensus 77 ~t~~~~~~~~S~siG~tSvS~~~~~~~~~~~~~~~~~~~~s~~a~~~L~~tGLLyrGV~~~r 138 (138) ...... + .+.+.+..+|.+. =-+||-+-+. T Consensus 76 ~~~~~~------------~-------------------~~~~~~~~LL~pY-R~~~g~~~~~ 105 (108) T protein:vir:19 76 AQSEVQ------------L-------------------YENAAAERMMFIH-RNWRGKAESE 105 (108) T ss_pred ccccch------------h-------------------hhhHHHHHHHHHH-HhcCCCCCcc Confidence 211100 0 0112244455442 2344544443 No 46 >protein:vir:1887 Length: 108 # NCBI annotation: gp6 # Family: family:all:6764 # MgeID: mge:41 # MgeName: HK022 # Cross-refs: genbank:acc:NP_037667;genbank:gi:9634125;genbank:GeneID:1262472 Probab=53.69 E-value=0.52 Score=22.13 Aligned_cols=101 Identities=18% Similarity=0.212 Sum_probs=61.5 Q ss_pred CccccccccCHHHHhc-CCCC--Ch-hhHHHHHHHHHHHHhHHhcccccccCcccccHHHHHHHHHHHHHHHHHHHHcCC Q lcl|Aclame:pro 1 MEVVIIAFLTQKEFED-LGFD--DV-EDFEKMEKRASHAVNLYCRNRYDYKDLKKEIALVQKAVKRAIAYQIAYLNDSGV 76 (138) Q Consensus 1 ~~~~~M~Ylt~~eY~~-~g~~--~~-~~F~kl~~rAs~~ID~lT~~~~~~~~~d~~~~~~q~~vKkAvcaQiey~~~~G~ 76 (138) |-|-.|+++|-++-|. +-++ +. +....++.-|++.|-..++... ...+.-....||.|+..=|.+++++-. T Consensus 1 ~~~~~M~~vtLee~K~hLRid~dddD~lI~~~i~AA~~~v~~~~~~~~-----~~~~~~~p~~ik~AiLllv~~~YenRE 75 (108) T protein:vir:18 1 MAIDVLDVISLSLFKQQIEFEEDDRDELITLYAQAAFDYCMRWCDEPA-----WKVAADIPAAVKGAVLLVFADMFEHRT 75 (108) T ss_pred CCCCcccccCHHHHHHHcCCCCCcchHHHHHHHHHHHHHHHHHhCCcc-----cccccccchHHHHHHHHHHHHHHhccc Confidence 9999999999999987 4333 22 2378999999999988776432 111222345789999999999998874 Q ss_pred ccccccCccCceeecceEEecccccccccccccccccccchHHHHHHHhhcCceeccCcccC Q lcl|Aclame:pro 77 MTAEDKQSFAGISLGRTSISYTVGHGQGSQQKTLADRFNLCLDAENELLVVGLGYTGISYDR 138 (138) Q Consensus 77 ~t~~~~~~~~S~siG~tSvS~~~~~~~~~~~~~~~~~~~~s~~a~~~L~~tGLLyrGV~~~r 138 (138) ...... + .+.+.+..+|.+. =-+||-+-+. T Consensus 76 ~~~~~~------------~-------------------~~~~~~~~LL~pY-R~~~g~~~~~ 105 (108) T protein:vir:18 76 AQSEVQ------------L-------------------YENAAAERMMFIH-RNWRGKAESE 105 (108) T ss_pred ccccch------------h-------------------hhhHHHHHHHHHH-HhcCCCCCcc Confidence 211100 0 0112244455442 2344544443 No 47 >protein:vir:96831 Length: 98 # NCBI annotation: ORF052 # Family: family:all:789 # ACLAME annotation(s): phi:0000067 - phage portal associated protein # MgeID: mge:1642 # MgeName: EW # Cross-refs: genbank:acc:YP_240159;genbank:gi:66395852;genbank:GeneID:5133172 Probab=50.51 E-value=0.56 Score=21.98 Aligned_cols=95 Identities=22% Similarity=0.270 Sum_probs=55.8 Q ss_pred ccccCHHHHhcCCCCCh---hhHHHHHHHHHHHHhHHhcccccccCcccccHHHHHHHHHHHHHHHHHHHHcCCcccccc Q lcl|Aclame:pro 6 IAFLTQKEFEDLGFDDV---EDFEKMEKRASHAVNLYCRNRYDYKDLKKEIALVQKAVKRAIAYQIAYLNDSGVMTAEDK 82 (138) Q Consensus 6 M~Ylt~~eY~~~g~~~~---~~F~kl~~rAs~~ID~lT~~~~~~~~~d~~~~~~q~~vKkAvcaQiey~~~~G~~t~~~~ 82 (138) |.=.+..--..+..++. +.|+.+.+.=-+.+--+||+.+.. ++| .-|||.+|-=|+| | .. T Consensus 1 Md~~dVK~l~~~~~~d~~~D~~~~~li~~y~e~aedyCN~~F~~----~lP----~gVkkfvAe~iky----~-----~~ 63 (98) T protein:vir:96 1 MDALDVKMLNGTRIDDVSNDDVINKLILAYKQVAEEYCNQVFGD----PLP----GGVKKFIAECIKY----G-----VS 63 (98) T ss_pred CCHHHHHHHhCCCCCCcccHHHHHHHHHHHHHHHHHHhCCcccc----cCC----ccHHHHHHHHHhh----c-----cc Confidence 32223333333444432 347777776666666677766532 222 3577777777777 2 12 Q ss_pred CccCceeecceEEecccccccccccccccccccchHHHHHHHhhcCceeccCcc Q lcl|Aclame:pro 83 QSFAGISLGRTSISYTVGHGQGSQQKTLADRFNLCLDAENELLVVGLGYTGISY 136 (138) Q Consensus 83 ~~~~S~siG~tSvS~~~~~~~~~~~~~~~~~~~~s~~a~~~L~~tGLLyrGV~~ 136 (138) +.++|-|.|-+|++|.. -+...++.+|.|.- =.-. T Consensus 64 ~nissRsMgtVSYty~T---------------~iP~~i~~~L~PyR----rlrw 98 (98) T protein:vir:96 64 GNIASRSMGTVSYTYVT---------------DVPSSMYKYLKPYR----KLRW 98 (98) T ss_pred CCcccccccceeeechh---------------hhhHHHHHHhhhhh----hccC Confidence 46899999999998853 15556788888732 1111 No 48 >protein:vir:102158 Length: 99 # NCBI annotation: uncharacterized phage protein (possible DNA packaging) # Family: family:all:316 # MgeID: mge:1641 # MgeName: phiSM101 # Cross-refs: genbank:acc:YP_699940;genbank:gi:110804046;genbank:GeneID:4206702 Probab=48.97 E-value=0.26 Score=23.81 Aligned_cols=94 Identities=12% Similarity=0.105 Sum_probs=53.1 Q ss_pred cccccccCHHHHhc-CCC--CCh-hhHHHHHHHHHHHHhHHhcccccccCcccccHHHHHHHHHHHHHHHHHHHHcCCcc Q lcl|Aclame:pro 3 VVIIAFLTQKEFED-LGF--DDV-EDFEKMEKRASHAVNLYCRNRYDYKDLKKEIALVQKAVKRAIAYQIAYLNDSGVMT 78 (138) Q Consensus 3 ~~~M~Ylt~~eY~~-~g~--~~~-~~F~kl~~rAs~~ID~lT~~~~~~~~~d~~~~~~q~~vKkAvcaQiey~~~~G~~t 78 (138) |. +|-++-|. +-. ++. +....++.-|+..|-..++..+ +..+ ..+|.|++.-|.+++++-..+ T Consensus 1 M~----vtLee~K~~LRID~d~dD~lI~~~i~aA~~~i~~~~~~~~-----~~~~----~~~k~Avl~lv~~~YenR~~~ 67 (99) T protein:vir:10 1 MI----LSVDEVKNYLRVDYDEDDILIQDLIESAEDYLYNATGKKF-----TEKN----KLAKRYCLALVYDWYKDKGMN 67 (99) T ss_pred Cc----CCHHHHHHHcCCCCCcchHHHHHHHHHHHHHHHHhhCCCC-----CCCC----hHHHHHHHHHHHHhHhcchhh Confidence 55 89998886 333 332 2389999999999988876432 2222 468999999999999997643 Q ss_pred ccccCccCceeecceEEecccccccccccccccccccchHHHHHHHhhcCceeccCcccC Q lcl|Aclame:pro 79 AEDKQSFAGISLGRTSISYTVGHGQGSQQKTLADRFNLCLDAENELLVVGLGYTGISYDR 138 (138) Q Consensus 79 ~~~~~~~~S~siG~tSvS~~~~~~~~~~~~~~~~~~~~s~~a~~~L~~tGLLyrGV~~~r 138 (138) ...... .+ ... .|...+..+|.+ +|+...+- T Consensus 68 ~~~~~~-~~----------------------~~~--~lp~~v~sli~q----lr~~~~~~ 98 (99) T protein:vir:10 68 IRATKN-TT----------------------VSE--KVKYTLQSILLQ----LKFCKEED 98 (99) T ss_pred hhhhhc-cc----------------------hhh--hhhHHHHHHHHH----HhhccCCC Confidence 322110 00 000 022223334433 23333222 No 49 >protein:vir:4831 Length: 105 # NCBI annotation: ORF27 # Family: family:all:734 # ACLAME annotation(s): phi:0000018 - phage genome packaging # MgeID: mge:105 # MgeName: 7201 # Cross-refs: genbank:acc:NP_038328;genbank:gi:9634654;genbank:GeneID:1262588 Probab=45.56 E-value=0.32 Score=23.27 Aligned_cols=94 Identities=12% Similarity=0.056 Sum_probs=50.8 Q ss_pred cccccccCHHHHhc-CCCC--Chh-hHHHHHHHHHHHHhHHhcccccccCcccccHHHHHHHHHHHHHHHHHHHHcCCcc Q lcl|Aclame:pro 3 VVIIAFLTQKEFED-LGFD--DVE-DFEKMEKRASHAVNLYCRNRYDYKDLKKEIALVQKAVKRAIAYQIAYLNDSGVMT 78 (138) Q Consensus 3 ~~~M~Ylt~~eY~~-~g~~--~~~-~F~kl~~rAs~~ID~lT~~~~~~~~~d~~~~~~q~~vKkAvcaQiey~~~~G~~t 78 (138) |. +|-++-|. +-++ +.+ ....++.-|++.|-..|+.... +.+..+ ....||.|+...|.+++++-..+ T Consensus 1 M~----vtLee~K~~LRID~dddD~lI~~~i~aA~~yi~~~ig~~~~---~~~~~~-~~~~~~~Avl~lv~~~YeNR~~~ 72 (105) T protein:vir:48 1 MS----VSKTSIMQTLNLDETDDTALIPAYIESAKQYIINAVGSDSK---FYDLEN-VQPLFDTAVIALTSSYFTYRVAL 72 (105) T ss_pred Cc----ccHHHHHHHcCCCCccchHHHHHHHHHHHHHHHHhhCCCCc---cccccC-CchHHHHHHHHHHHHHHhhhhhc Confidence 55 89999887 3333 222 3788999999999887763221 222111 23468999999999999987432 Q ss_pred ccccCccCceeecceEEecccccccccccccccccccchHHHHHHHhhcCceeccCc--ccC Q lcl|Aclame:pro 79 AEDKQSFAGISLGRTSISYTVGHGQGSQQKTLADRFNLCLDAENELLVVGLGYTGIS--YDR 138 (138) Q Consensus 79 ~~~~~~~~S~siG~tSvS~~~~~~~~~~~~~~~~~~~~s~~a~~~L~~tGLLyrGV~--~~r 138 (138) ..... .- +...+.++|.| +||-- ++. T Consensus 73 ~~~~~--~~----------------------------ip~~v~sli~~----lR~~y~~~~e 100 (105) T protein:vir:48 73 TDTVT--YP----------------------------INLTLNSIIGQ----LRGLYATYSE 100 (105) T ss_pred cCccc--ch----------------------------hhHHHHHHHHH----Hhhhhhhhhh Confidence 21110 00 11122223333 22210 111 No 50 >protein:vir:4954 Length: 104 # NCBI annotation: putative DNA packaging protein # Family: family:all:734 # ACLAME annotation(s): phi:0000018 - phage genome packaging # MgeID: mge:108 # MgeName: Sfi19 # Cross-refs: genbank:acc:NP_049930;genbank:gi:9632901;genbank:GeneID:1262077 Probab=43.73 E-value=0.32 Score=23.30 Aligned_cols=96 Identities=9% Similarity=0.045 Sum_probs=49.6 Q ss_pred cccccccCHHHHhc-CCC--CChhh-HHHHHHHHHHHHhHHhcccccccCcccccHHHHHHHHHHHHHHHHHHHHcCCcc Q lcl|Aclame:pro 3 VVIIAFLTQKEFED-LGF--DDVED-FEKMEKRASHAVNLYCRNRYDYKDLKKEIALVQKAVKRAIAYQIAYLNDSGVMT 78 (138) Q Consensus 3 ~~~M~Ylt~~eY~~-~g~--~~~~~-F~kl~~rAs~~ID~lT~~~~~~~~~d~~~~~~q~~vKkAvcaQiey~~~~G~~t 78 (138) |. +|-++-|. +-. ++.++ ...++.-|+..|-..|+.-. .|..+.+ ....+|.||+..|.+++++-..+ T Consensus 1 M~----vtLeeiK~~LRID~dddD~li~~~i~aA~~yi~~aig~~~---~~~~~~~-~~~~~~~Avl~Lv~~~YeNR~~~ 72 (104) T protein:vir:49 1 MS----VSKTSIMQTLNLDETDDTALIPAYIESAKQYIINAVGSDS---KFYDLDS-VRALFDTAVIALTSSYFTYRVAL 72 (104) T ss_pred Cc----ccHHHHHHHcCCCCccchHHHHHHHHHHHHHHHHhhCCCC---ccccccC-CChHHHHHHHHHHHHHHhhchhc Confidence 55 78898886 333 33222 78889999999988776322 1222222 23468999999999999997543 Q ss_pred ccccCccCceeecceEEecccccccccccccccccccchHHHHHHHhhcCceeccCcccC Q lcl|Aclame:pro 79 AEDKQSFAGISLGRTSISYTVGHGQGSQQKTLADRFNLCLDAENELLVVGLGYTGISYDR 138 (138) Q Consensus 79 ~~~~~~~~S~siG~tSvS~~~~~~~~~~~~~~~~~~~~s~~a~~~L~~tGLLyrGV~~~r 138 (138) ..... .-+. ..+..+|.|-==+|. .++. T Consensus 73 ~~~~~--~~vp----------------------------~~v~sli~qLr~~y~--~~~e 100 (104) T protein:vir:49 73 TDTAT--YPVN----------------------------LTLNSIIGQLRGLYA--TYSE 100 (104) T ss_pred ccccc--chhh----------------------------HHHHHHHHHHHHhhh--hhhh Confidence 22211 0111 011111111000111 1111 No 51 >protein:vir:7410 Length: 107 # NCBI annotation: hypothetical protein # Family: family:all:734 # ACLAME annotation(s): phi:0000018 - phage genome packaging # MgeID: mge:146 # MgeName: P335 # Cross-refs: genbank:acc:NP_839927;genbank:gi:30089897;genbank:GeneID:1260684 Probab=38.86 E-value=0.51 Score=22.18 Aligned_cols=102 Identities=17% Similarity=0.020 Sum_probs=49.7 Q ss_pred cccccccCHHHHhc-CCCCChhh--HHHHHHHHHHHHhHHhcccccccCcccccHHHHHHHHHHHHHHHHHHHHcCCccc Q lcl|Aclame:pro 3 VVIIAFLTQKEFED-LGFDDVED--FEKMEKRASHAVNLYCRNRYDYKDLKKEIALVQKAVKRAIAYQIAYLNDSGVMTA 79 (138) Q Consensus 3 ~~~M~Ylt~~eY~~-~g~~~~~~--F~kl~~rAs~~ID~lT~~~~~~~~~d~~~~~~q~~vKkAvcaQiey~~~~G~~t~ 79 (138) |. ||.++.|. +-.++.+| ...++.-|++.|=.-++.-..-..|....+ ....+|.||++=+...+++-..+- T Consensus 1 M~----v~LdeiK~~LRIDddDD~ll~~~i~aAe~yI~~Aig~~~~~~~fy~~e~-~~~l~~~Avl~La~~wYeNR~at~ 75 (107) T protein:vir:74 1 MS----VTVDDLLDQLSEDDDRKPQLQIYFDTATAYVKNAVSSDTVDAPFFNVEN-VSPIYDVAVLSYSMDLWINRSTTM 75 (107) T ss_pred Ce----ecHHHHHHHcCCCCChhHHHHHHHHHHHHHHhhhcCCcccccccccccC-cchHHHHHHHHHHHHHHHhccccc Confidence 66 99999997 55543333 788889999888665553322222322221 234699999999988888875431 Q ss_pred cccCccCcee-ecceEEecccc-cccccccccccccccchHH Q lcl|Aclame:pro 80 EDKQSFAGIS-LGRTSISYTVG-HGQGSQQKTLADRFNLCLD 119 (138) Q Consensus 80 ~~~~~~~S~s-iG~tSvS~~~~-~~~~~~~~~~~~~~~~s~~ 119 (138) .. +...-| |+-..-.|..- .-.+++..++ + T Consensus 76 ~v--p~~v~siI~QLRg~y~~~~e~~~~~~~~~--------~ 107 (107) T protein:vir:74 76 PP--TTAVDHMVGQLRGLYSSWKEEQGGQNLQT--------E 107 (107) T ss_pred cc--cHHHHHHHHHHhhcccchhhhcCCCcccC--------C Confidence 10 000000 11111111100 0001111111 0 No 52 >protein:vir:4857 Length: 104 # NCBI annotation: putative DNA packaging protein # Family: family:all:734 # ACLAME annotation(s): phi:0000018 - phage genome packaging # MgeID: mge:106 # MgeName: DT1 # Cross-refs: genbank:acc:NP_049397;genbank:gi:9632425;genbank:GeneID:1258493 Probab=38.26 E-value=0.47 Score=22.37 Aligned_cols=94 Identities=11% Similarity=0.060 Sum_probs=51.9 Q ss_pred cccccccCHHHHhc-CCC--CChhh-HHHHHHHHHHHHhHHhcccccccCcccccHHHHHHHHHHHHHHHHHHHHcCCcc Q lcl|Aclame:pro 3 VVIIAFLTQKEFED-LGF--DDVED-FEKMEKRASHAVNLYCRNRYDYKDLKKEIALVQKAVKRAIAYQIAYLNDSGVMT 78 (138) Q Consensus 3 ~~~M~Ylt~~eY~~-~g~--~~~~~-F~kl~~rAs~~ID~lT~~~~~~~~~d~~~~~~q~~vKkAvcaQiey~~~~G~~t 78 (138) |. +|-++-|. +-. ++.++ ...++.-|+..|...++..- .+....+ ....||.|+...|.+++++-..+ T Consensus 1 M~----vtLeevK~~LRID~d~dD~li~~~i~aA~~~i~~~ig~~~---~~~~~~~-~~~~~~~Avl~lv~~~Y~NR~~~ 72 (104) T protein:vir:48 1 MS----VSKETIMQTLNLDETDDTALIPAYIESARQYVVNSVGDDP---KFYNLDS-VRALFDTAVIALTSSYFTYRVAL 72 (104) T ss_pred Cc----ccHHHHHHHcCCCCccchHHHHHHHHHHHHHHHHhhCCCC---CcccccC-CChhHHHHHHHHHHHHHhhhhhh Confidence 55 88898886 333 33222 77899999999988776321 1222221 13468999999999999986432 Q ss_pred ccccCccCceeecceEEecccccccccccccccccccchHHHHHHHhhcCceecc--CcccC Q lcl|Aclame:pro 79 AEDKQSFAGISLGRTSISYTVGHGQGSQQKTLADRFNLCLDAENELLVVGLGYTG--ISYDR 138 (138) Q Consensus 79 ~~~~~~~~S~siG~tSvS~~~~~~~~~~~~~~~~~~~~s~~a~~~L~~tGLLyrG--V~~~r 138 (138) ..... . .+...+.++|.+ +|| ..+.. T Consensus 73 ~~~~~--~----------------------------~ip~~v~sli~~----lR~~y~~~~~ 100 (104) T protein:vir:48 73 TDTAT--Y----------------------------PVNLTLNSIIGQ----LRGLYATYSE 100 (104) T ss_pred ccccc--c----------------------------hhhHHHHHHHHH----HHHhhhhhcc Confidence 11100 0 122223344444 333 11222 No 53 >protein:vir:79640 Length: 134 # NCBI annotation: gp38 # Family: family:all:5122 # MgeID: mge:1872 # MgeName: TLS # Cross-refs: genbank:acc:YP_001285527;genbank:gi:148734510;genbank:GeneID:5219998 Probab=36.92 E-value=1 Score=20.54 Aligned_cols=117 Identities=13% Similarity=0.044 Sum_probs=50.1 Q ss_pred cccccccCHHHHhcCC--CCCh--hhHHHHHHHHHHHHhHHhcccccccCcccccHHHHHHHHHHHHHHHHHHH----Hc Q lcl|Aclame:pro 3 VVIIAFLTQKEFEDLG--FDDV--EDFEKMEKRASHAVNLYCRNRYDYKDLKKEIALVQKAVKRAIAYQIAYLN----DS 74 (138) Q Consensus 3 ~~~M~Ylt~~eY~~~g--~~~~--~~F~kl~~rAs~~ID~lT~~~~~~~~~d~~~~~~q~~vKkAvcaQiey~~----~~ 74 (138) |++.+ +-+.|+.+. |.++ +..+.++.-|+..|+.= . + .+..+.++. .+.|.+-.++ .. T Consensus 1 m~d~~--~ve~Fr~l~PeF~~vpde~l~~~~~~A~~~i~~~---~-----~---g~~~~~al~-lltAHLl~l~~~~~~~ 66 (134) T protein:vir:79 1 MNDIE--ILEQIYKIAPAFKKVDPELIQAWIELAKDFVCEK---H-----F---KDKYFRAVA-LYTLHLMTLDGAMKQE 66 (134) T ss_pred CchHH--HHHHHHHhccccccCCHHHHHHHHHHhhhhhcCC---C-----C---ChHHHHHHH-HHHHHHHhhccccccc Confidence 77653 356666643 3333 34899999999988511 1 1 122233332 2333444432 12 Q ss_pred CCcccccc-CccCceeecceEEecccccccccc---cccc-cccccchHHHHHHHhhcCc----eeccCccc Q lcl|Aclame:pro 75 GVMTAEDK-QSFAGISLGRTSISYTVGHGQGSQ---QKTL-ADRFNLCLDAENELLVVGL----GYTGISYD 137 (138) Q Consensus 75 G~~t~~~~-~~~~S~siG~tSvS~~~~~~~~~~---~~~~-~~~~~~s~~a~~~L~~tGL----LyrGV~~~ 137 (138) |....... ...+|-++|.+||||...+..+.+ ..+. ++.| . ++.-+...|+ -.||+|-- T Consensus 67 g~~~~~~~grv~ssst~G~vSvS~a~ps~~~~~~Wl~~TpYGq~y---~-~L~k~~~GGf~~~t~~~~~~~r 134 (134) T protein:vir:79 67 SESVESYSHRIASFSLTGEFSQTFSKVSDDTSGNTLRQTPWGKMY---E-VLNKKKGGGFGLTTAFHRRCSR 134 (134) T ss_pred ccccccccchhhhhhhhcceeeeccCcccchhHHHHhcCHHHHHH---H-HHHHhhccchHhhhhccccCCC Confidence 21111111 233445599999999653322210 1111 1111 0 1111223333 23444433 No 54 >protein:vir:79253 Length: 138 # NCBI annotation: hypothetical protein # Family: family:all:348 # MgeID: mge:1867 # MgeName: Phage MP22 # Cross-refs: genbank:acc:YP_001469165;genbank:gi:157835007;genbank:GeneID:5648834 Probab=36.46 E-value=0.43 Score=22.62 Aligned_cols=109 Identities=18% Similarity=0.208 Sum_probs=50.0 Q ss_pred ccccCHHHHhcC-CC--------------CCh--hhHHHHHHHHHHHHhHHhcccccccCcccccHHHHHHHHHHHHHHH Q lcl|Aclame:pro 6 IAFLTQKEFEDL-GF--------------DDV--EDFEKMEKRASHAVNLYCRNRYDYKDLKKEIALVQKAVKRAIAYQI 68 (138) Q Consensus 6 M~Ylt~~eY~~~-g~--------------~~~--~~F~kl~~rAs~~ID~lT~~~~~~~~~d~~~~~~q~~vKkAvcaQi 68 (138) |+|+|.++.... |- +.+ +-.++.+..|+..||.+-..||.-- +.. +-..+|+.+|- | T Consensus 1 M~YaT~~dl~~r~ge~~l~~Ltd~~~~~~~~~d~~~i~~Al~dA~aeIdgYL~~RY~lP-l~~----vP~~L~~~a~d-I 74 (138) T protein:vir:79 1 MSYCTLADLIEQYSEQKIREVSDRVNKPATTIDTVIVDRAIADADSEIDLHLHGRYQLP-LAS----VPTALKRIACG-L 74 (138) T ss_pred CCCCCHHHHHHhcCHHHHHHHhccCccccCcccHHHHHHHHHHHHHHHHHHHhhcccCC-ccc----cchHHHHHHHH-H Confidence 999999987642 21 112 2388999999999999998888521 221 22456666664 3 Q ss_pred HHHHHcCC-cccc-cc-------CccCceeecceEEecccccccccccc---cccccccchHHHHHH Q lcl|Aclame:pro 69 AYLNDSGV-MTAE-DK-------QSFAGISLGRTSISYTVGHGQGSQQK---TLADRFNLCLDAENE 123 (138) Q Consensus 69 ey~~~~G~-~t~~-~~-------~~~~S~siG~tSvS~~~~~~~~~~~~---~~~~~~~~s~~a~~~ 123 (138) ..+...+. ..+. .. .-+.-+.-|+.++-...........+ ...+.--.+.| | T Consensus 75 A~Y~L~~~~~~~e~i~~rY~~Ai~~L~~Ia~Gk~~Lg~~~~~~~~~~~~~~~~~~~~r~F~Rd---~ 138 (138) T protein:vir:79 75 AYANLHIVLKEENPVYKTAEHLRKLLSGIANGKLSLALDADGKPAPVANTVQISEGRNDWGAD---W 138 (138) T ss_pred HHHHHhcCCCCcHHHHHHHHHHHHHHHHHhcCcccCCCCCCCcCCCCCCceeeecCCCCCCCC---C Confidence 33333332 2111 11 12334555655542211110000000 00000001111 1 No 55 >protein:vir:99222 Length: 138 # NCBI annotation: hypothetical protein # Family: family:all:348 # MgeID: mge:1649 # MgeName: DMS3 # Cross-refs: genbank:acc:YP_950460;genbank:gi:119953661;genbank:GeneID:4643082 Probab=36.46 E-value=0.43 Score=22.62 Aligned_cols=109 Identities=18% Similarity=0.208 Sum_probs=50.0 Q ss_pred ccccCHHHHhcC-CC--------------CCh--hhHHHHHHHHHHHHhHHhcccccccCcccccHHHHHHHHHHHHHHH Q lcl|Aclame:pro 6 IAFLTQKEFEDL-GF--------------DDV--EDFEKMEKRASHAVNLYCRNRYDYKDLKKEIALVQKAVKRAIAYQI 68 (138) Q Consensus 6 M~Ylt~~eY~~~-g~--------------~~~--~~F~kl~~rAs~~ID~lT~~~~~~~~~d~~~~~~q~~vKkAvcaQi 68 (138) |+|+|.++.... |- +.+ +-.++.+..|+..||.+-..||.-- +.. +-..+|+.+|- | T Consensus 1 M~YaT~~dl~~r~ge~~l~~Ltd~~~~~~~~~d~~~i~~Al~dA~aeIdgYL~~RY~lP-l~~----vP~~L~~~a~d-I 74 (138) T protein:vir:99 1 MSYCTLADLIEQYSEQKIREVSDRVNKPATTIDTVIVDRAIADADSEIDLHLHGRYQLP-LAS----VPTALKRIACG-L 74 (138) T ss_pred CCCCCHHHHHHhcCHHHHHHHhccCccccCcccHHHHHHHHHHHHHHHHHHHhhcccCC-ccc----cchHHHHHHHH-H Confidence 999999987642 21 112 2388999999999999998888521 221 22456666664 3 Q ss_pred HHHHHcCC-cccc-cc-------CccCceeecceEEecccccccccccc---cccccccchHHHHHH Q lcl|Aclame:pro 69 AYLNDSGV-MTAE-DK-------QSFAGISLGRTSISYTVGHGQGSQQK---TLADRFNLCLDAENE 123 (138) Q Consensus 69 ey~~~~G~-~t~~-~~-------~~~~S~siG~tSvS~~~~~~~~~~~~---~~~~~~~~s~~a~~~ 123 (138) ..+...+. ..+. .. .-+.-+.-|+.++-...........+ ...+.--.+.| | T Consensus 75 A~Y~L~~~~~~~e~i~~rY~~Ai~~L~~Ia~Gk~~Lg~~~~~~~~~~~~~~~~~~~~r~F~Rd---~ 138 (138) T protein:vir:99 75 AYANLHIVLKEENPVYKTAEHLRKLLSGIANGKLSLALDADGKPAPVANTVQISEGRNDWGAD---W 138 (138) T ss_pred HHHHHhcCCCCcHHHHHHHHHHHHHHHHHhcCcccCCCCCCCcCCCCCCceeeecCCCCCCCC---C Confidence 33333332 2111 11 12334555655542211110000000 00000001111 1 No 56 >protein:vir:2505 Length: 128 # NCBI annotation: hypothetical protein # Family: family:all:28222 # MgeID: mge:53 # MgeName: TM4 # Cross-refs: genbank:acc:NP_569746;genbank:gi:18496896;genbank:GeneID:932265 Probab=36.31 E-value=0.38 Score=22.88 Aligned_cols=118 Identities=14% Similarity=0.149 Sum_probs=56.6 Q ss_pred CccccccccCHHHHhc-CCC----CChhhHHHHHHHHHHHHhHHhcccccccCcccccHHHHHHHHHHHHHHHHHHHHcC Q lcl|Aclame:pro 1 MEVVIIAFLTQKEFED-LGF----DDVEDFEKMEKRASHAVNLYCRNRYDYKDLKKEIALVQKAVKRAIAYQIAYLNDSG 75 (138) Q Consensus 1 ~~~~~M~Ylt~~eY~~-~g~----~~~~~F~kl~~rAs~~ID~lT~~~~~~~~~d~~~~~~q~~vKkAvcaQiey~~~~G 75 (138) -|. -+.+|.+.-+. +.- ++.+...-|+.-|++.|+-..... -..++.| ..||.-|| ||.=-...- T Consensus 2 ~~~--~alAtvdDv~~~lrr~Lt~dE~~~a~~Ll~eAsdlI~g~l~~~----~vp~~~p---~~v~rVvA-~ivarAltr 71 (128) T protein:vir:25 2 TEC--KALATSQDVKRALRRDLTEAEQTDLSELLAEATDLVVGYLHPY----PVPTPTP---GPIKRVVA-SMVAAVLTR 71 (128) T ss_pred ccc--hhccCHHHHHHHhcCCCCHHHHHHHHHHHhcchheeeeecCCC----CCCCCCC---chHHHHHH-HHHHHHhhC Confidence 111 13566666654 322 222346777888888877554321 1222222 33444443 332222222 Q ss_pred CccccccCccCceeecceEEecccccccccccccccccccchHHHHHHHhh--cCceeccCcccC Q lcl|Aclame:pro 76 VMTAEDKQSFAGISLGRTSISYTVGHGQGSQQKTLADRFNLCLDAENELLV--VGLGYTGISYDR 138 (138) Q Consensus 76 ~~t~~~~~~~~S~siG~tSvS~~~~~~~~~~~~~~~~~~~~s~~a~~~L~~--tGLLyrGV~~~r 138 (138) .... -....|.+.|.+|.+|+.+++++. .-|+..--.-|++ +|..---..++| T Consensus 72 ~~~~--~pe~~S~TAgpfs~~ft~~~~~~g--------~yLTaa~k~~Lrp~R~~~~sV~l~ser 126 (128) T protein:vir:25 72 PTQI--LPETQSLTADGFGVTFTPGGNSPG--------PYLSAALKQRLRPYRTGMVAVEMGSER 126 (128) T ss_pred CCcc--CCCceeeecccccccccCCCCCCC--------ceEcHHHHhhcccccceeeEeeccccc Confidence 2111 224568899999988876544322 1233333334544 343333355778 No 57 >protein:vir:4998 Length: 106 # NCBI annotation: putative DNA packaging protein # Family: family:all:734 # ACLAME annotation(s): phi:0000018 - phage genome packaging # MgeID: mge:109 # MgeName: Sfi21 # Cross-refs: genbank:acc:NP_049972;genbank:gi:9632944;genbank:GeneID:1262107 Probab=34.50 E-value=0.7 Score=21.44 Aligned_cols=96 Identities=13% Similarity=0.030 Sum_probs=49.2 Q ss_pred cccccccCHHHHhc-CCCC--Ch-hhHHHHHHHHHHHHhHHhcccccccCcccccHHHHHHHHHHHHHHHHHHHHcCCcc Q lcl|Aclame:pro 3 VVIIAFLTQKEFED-LGFD--DV-EDFEKMEKRASHAVNLYCRNRYDYKDLKKEIALVQKAVKRAIAYQIAYLNDSGVMT 78 (138) Q Consensus 3 ~~~M~Ylt~~eY~~-~g~~--~~-~~F~kl~~rAs~~ID~lT~~~~~~~~~d~~~~~~q~~vKkAvcaQiey~~~~G~~t 78 (138) |. +|.++-|. +.++ +. +-...++.-|+..|-..++.. .+|....+ ....+|.||+..+.+.+++-..+ T Consensus 1 M~----v~Le~iK~~LRID~ddDD~li~~~i~AA~~yi~~aig~~---~~~~~~~~-~~~~~~~Avl~Lv~~~YeNR~~~ 72 (106) T protein:vir:49 1 MS----VSKEIIMQTLNLDETDDTALIPAYIESAQQYIINAVGSD---PKFYELEN-VKYLFDTAVIALTSTYFTYRVAL 72 (106) T ss_pred Cc----ccHHHHHHHcCCCCccchHHHHHHHHHHHHHHHhhcCCC---CCCCCcCC-CchHHHHHHHHHHHHHHhhcccc Confidence 55 78888887 4443 22 237889999999998776532 12322222 23468999999999999997543 Q ss_pred ccccCccCceeecceEEecccccccccccccccccccchHHHHHHHhhcCceeccCcccC Q lcl|Aclame:pro 79 AEDKQSFAGISLGRTSISYTVGHGQGSQQKTLADRFNLCLDAENELLVVGLGYTGISYDR 138 (138) Q Consensus 79 ~~~~~~~~S~siG~tSvS~~~~~~~~~~~~~~~~~~~~s~~a~~~L~~tGLLyrGV~~~r 138 (138) ..... ..+..| +..+|.|-=-+| -.++. T Consensus 73 ~~~~~--~~vp~~----------------------------v~slI~qLR~~y--~~~~e 100 (106) T protein:vir:49 73 NETLT--YPINLT----------------------------LNSIIGQLRGLY--ATYSD 100 (106) T ss_pred cCccc--ccccHH----------------------------HHHHHHHHHhhh--hhhhh Confidence 22211 111111 111111100000 00000 No 58 >protein:vir:1384 Length: 92 # NCBI annotation: Gp7 protein # Family: family:all:316 # MgeID: mge:314 # MgeName: phi3626 # Cross-refs: genbank:acc:NP_612836;genbank:gi:20065970;genbank:GeneID:935785 Probab=32.63 E-value=0.68 Score=21.51 Aligned_cols=87 Identities=11% Similarity=0.016 Sum_probs=47.6 Q ss_pred cCHHHHhc-CCCC--Ch-hhHHHHHHHHHHHHhHHhcccccccCcccccHHHHHHHHHHHHHHHHHHHHcCCccccccCc Q lcl|Aclame:pro 9 LTQKEFED-LGFD--DV-EDFEKMEKRASHAVNLYCRNRYDYKDLKKEIALVQKAVKRAIAYQIAYLNDSGVMTAEDKQS 84 (138) Q Consensus 9 lt~~eY~~-~g~~--~~-~~F~kl~~rAs~~ID~lT~~~~~~~~~d~~~~~~q~~vKkAvcaQiey~~~~G~~t~~~~~~ 84 (138) +|-++-|. +-++ +. +....++.-|++.|-..|+-++. . ...||.|++..|.+++++-.....+... T Consensus 1 vtLeevK~~LRID~ddDD~lI~~~i~aA~~~i~~~~~~~~~------~----~~~~~~Avlllv~~~YenR~~~~~~~~~ 70 (92) T protein:vir:13 1 MDLRELKEYLRIDFEEDDILLRSLLLAAEEYLYNAGIKRDY------K----KSLYSLAIKILVKHWYDNRDCVVAGNVN 70 (92) T ss_pred CCHHHHHHHcCCCCCcchHHHHHHHHHHHHHHHhhcccccc------c----hhHHHHHHHHHHHHhHhccccccccchh Confidence 88888886 3333 22 23899999999999877753321 1 2468999999999999987533221110 Q ss_pred cCceeecceEEecccccccccccccccccccchHHHHHHHhhcCceeccCc-ccC Q lcl|Aclame:pro 85 FAGISLGRTSISYTVGHGQGSQQKTLADRFNLCLDAENELLVVGLGYTGIS-YDR 138 (138) Q Consensus 85 ~~S~siG~tSvS~~~~~~~~~~~~~~~~~~~~s~~a~~~L~~tGLLyrGV~-~~r 138 (138) . .+...+..+|.+- |-.+ +|- T Consensus 71 -~----------------------------~ip~~v~sll~~l----R~~~~~~~ 92 (92) T protein:vir:13 71 -N----------------------------KLEYSLNAILTQL----RYCGDDNG 92 (92) T ss_pred -h----------------------------hhhHHHHHHHHHh----hhccCCCC Confidence 0 0111122222221 1111 111 No 59 >protein:vir:93592 Length: 108 # NCBI annotation: hypothetical protein # Family: family:all:1879 # MgeID: mge:157 # MgeName: phi 4795 # Cross-refs: genbank:acc:YP_001449297;genbank:gi:157166045;uniprot:Q6H9U4;genbank:GeneID:5580414 Probab=32.55 E-value=0.91 Score=20.80 Aligned_cols=98 Identities=17% Similarity=0.125 Sum_probs=51.2 Q ss_pred cccccCHHHHhc-CCC--C-ChhhHHHHHHHHHHHHhHHhcccccc---cCcccccHHHHHHHHHHHHHHHHHHHHcCCc Q lcl|Aclame:pro 5 IIAFLTQKEFED-LGF--D-DVEDFEKMEKRASHAVNLYCRNRYDY---KDLKKEIALVQKAVKRAIAYQIAYLNDSGVM 77 (138) Q Consensus 5 ~M~Ylt~~eY~~-~g~--~-~~~~F~kl~~rAs~~ID~lT~~~~~~---~~~d~~~~~~q~~vKkAvcaQiey~~~~G~~ 77 (138) -|+++|-++-|. +-. + +.+....+++-|++.|=...+..... .+.+..+.-....||.||..-|.+++++-.. T Consensus 1 mm~~vtLeevK~hLRId~d~dD~li~~~i~aA~~~v~~~l~~~~~~~~~~~~~~~~~~~~~~i~~AvLlLv~~~YenRe~ 80 (108) T protein:vir:93 1 MTALLTLEEIKAHLRVDHDADDDMLMDKVRQATAVLLAYIQGSRDKVIREDGELIPGEALTRMKGAAMRLTGMLYRNPDL 80 (108) T ss_pred CCcCCCHHHHHHHcCCCCCcChHHHHHHHHHHHHHHHHHhccccccccccccccccccCChHHHHHHHHHHHHHHhcccc Confidence 466799999986 332 2 22348888999988876555433221 1111111112346999999999999999754 Q ss_pred cccccCccCceeecceEEecccccccccccccccccccchHHHHHH---HhhcCce Q lcl|Aclame:pro 78 TAEDKQSFAGISLGRTSISYTVGHGQGSQQKTLADRFNLCLDAENE---LLVVGLG 130 (138) Q Consensus 78 t~~~~~~~~S~siG~tSvS~~~~~~~~~~~~~~~~~~~~s~~a~~~---L~~tGLL 130 (138) .... +++.+. +...+..+ |+.-=|| T Consensus 81 ~~~~-----~~~~~e-----------------------lP~~v~~Ll~~~R~p~~~ 108 (108) T protein:vir:93 81 AERE-----ELLQGE-----------------------LPFSVSVLIYDLRCPTVL 108 (108) T ss_pred cccc-----cccccc-----------------------CCHHHHHHHHHccccccC Confidence 3211 111110 11112222 2222233 No 60 >protein:vir:4702 Length: 113 # NCBI annotation: hypothetical protein # Family: family:all:734 # ACLAME annotation(s): phi:0000018 - phage genome packaging # MgeID: mge:102 # MgeName: phiPV83 # Cross-refs: genbank:acc:NP_061634;genbank:gi:9635721;genbank:GeneID:1263015 Probab=29.36 E-value=0.7 Score=21.44 Aligned_cols=100 Identities=16% Similarity=0.104 Sum_probs=45.0 Q ss_pred cccccccC---HHHHhc---CCCCChh-hHHHHHHHHHHHHhHHhcccc-cccCcccccHHHHHHHHHHHHHHHHHHHHc Q lcl|Aclame:pro 3 VVIIAFLT---QKEFED---LGFDDVE-DFEKMEKRASHAVNLYCRNRY-DYKDLKKEIALVQKAVKRAIAYQIAYLNDS 74 (138) Q Consensus 3 ~~~M~Ylt---~~eY~~---~g~~~~~-~F~kl~~rAs~~ID~lT~~~~-~~~~~d~~~~~~q~~vKkAvcaQiey~~~~ 74 (138) |. +| -++-|. .-+++.+ -...++.-|+..|-..++..- ....+...+ ..||.||...+.+++++ T Consensus 1 M~----vt~~dLeeiK~~LRID~d~DD~li~~~i~AA~~~I~~ai~~~~~~~~~~~~~~----~~~~~AvllLv~~~YeN 72 (113) T protein:vir:47 1 MQ----LTAEELKLLKKHCKIDHNSEDDLLEIYYSWAFHEIASAVTDEPSKYIDWFKSH----PLFARAIYPLASYYFEN 72 (113) T ss_pred Cc----ccHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHHHHhhccccccccccccCCc----hHHHHHHHHHHHHHHhh Confidence 33 33 334554 3333322 378889999999976554221 111122222 37999999999999999 Q ss_pred CCccccccCccCceeec----ceEEeccccc-ccccccccc Q lcl|Aclame:pro 75 GVMTAEDKQSFAGISLG----RTSISYTVGH-GQGSQQKTL 110 (138) Q Consensus 75 G~~t~~~~~~~~S~siG----~tSvS~~~~~-~~~~~~~~~ 110 (138) -..+.......-.+++. ...-.|..-. ..+..+..+ T Consensus 73 R~a~~~~~~~~vp~~v~sli~qlR~~y~~~~~~~~~~~~~~ 113 (113) T protein:vir:47 73 RIAYLDRDLSLAPHMVLSTVHKLRGSFEQFLESENDEESGT 113 (113) T ss_pred hhhccccccccccHHHHHHHHHHHHHHHHHhhhcCCCCCCC Confidence 86543221111111111 1111111000 001111111 No 61 >protein:vir:1993 Length: 141 # NCBI annotation: Hypothetical protein # Family: family:all:348 # MgeID: mge:320 # MgeName: Mu # Cross-refs: genbank:acc:NP_050640;genbank:gi:9633527;genbank:GeneID:2636296 Probab=28.50 E-value=0.97 Score=20.66 Aligned_cols=117 Identities=14% Similarity=0.072 Sum_probs=52.8 Q ss_pred ccccCHHHHhcC-C---------C------CChhhHHHHHHHHHHHHhHHhcccccccCcccccHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 6 IAFLTQKEFEDL-G---------F------DDVEDFEKMEKRASHAVNLYCRNRYDYKDLKKEIALVQKAVKRAIAYQIA 69 (138) Q Consensus 6 M~Ylt~~eY~~~-g---------~------~~~~~F~kl~~rAs~~ID~lT~~~~~~~~~d~~~~~~q~~vKkAvcaQie 69 (138) |+|+|.+++... | . .++.-.++.+..|+..||.+-..||.-- +.. +-..+|+.+| .|. T Consensus 1 M~Y~T~~Dl~~~~ge~~l~~Lt~d~~~~g~~d~~~i~~Al~dA~~eIdgyL~~RY~lP-l~~----~P~~L~~~a~-dIA 74 (141) T protein:vir:19 1 MNYATVNDLCARYTRTRLDILTRPKTADGQPDDAVAEQALADASAFIDGYLAARFVLP-LTV----VPSLLKRQCC-VVA 74 (141) T ss_pred CCcCCHHHHHHhcCHHHHHHHhcCCCCccccCHHHHHHHHHHHHHHHHHHHhhcccCC-ccc----cchHHHHHHH-HHH Confidence 999999988642 2 0 1112378999999999999998888531 222 2234566665 344 Q ss_pred HHHHcCCccccc-c-------CccCceeecceEEecccccccccccccccccccchHHHHHHHhhcCce Q lcl|Aclame:pro 70 YLNDSGVMTAED-K-------QSFAGISLGRTSISYTVGHGQGSQQKTLADRFNLCLDAENELLVVGLG 130 (138) Q Consensus 70 y~~~~G~~t~~~-~-------~~~~S~siG~tSvS~~~~~~~~~~~~~~~~~~~~s~~a~~~L~~tGLL 130 (138) .+...+-...+. . .-+.-+.-|+.++-..........+. ....+.-.+.+..= ...|++ T Consensus 75 ~Y~L~~~~~~e~i~~rY~~Ai~~L~~Ia~Gk~~Lg~~~~~~~~~~~~-~~~~~~~~~r~f~r-~~~G~~ 141 (141) T protein:vir:19 75 WFYLNESQPTEQITATYRDTVRWLEQVRDGKTDPGVESRTAASPEGE-DLVQVQSDPPVFSR-KQKGFI 141 (141) T ss_pred HHHHhcCCCChHHHHHHHHHHHHHHHHhcCccccCCCCCCCCCCCCC-ceeEeecCCcccCc-ccccCC Confidence 434433221111 0 12334555655552111111110000 00000000000000 124555 No 62 >protein:vir:101559 Length: 158 # NCBI annotation: gp08 # Family: family:all:664 # MgeID: mge:1477 # MgeName: Bcep43 # Cross-refs: genbank:acc:NP_958112;genbank:gi:41057658;genbank:GeneID:2716816 Probab=27.90 E-value=1.8 Score=19.19 Aligned_cols=130 Identities=12% Similarity=0.024 Sum_probs=51.8 Q ss_pred ccccccc---CHHHHhcCC--CCChh--hHHHHHHHHHHHHhHHhcccccccCcccccHHHHHHHHHHHHHHHHHHHHcC Q lcl|Aclame:pro 3 VVIIAFL---TQKEFEDLG--FDDVE--DFEKMEKRASHAVNLYCRNRYDYKDLKKEIALVQKAVKRAIAYQIAYLNDSG 75 (138) Q Consensus 3 ~~~M~Yl---t~~eY~~~g--~~~~~--~F~kl~~rAs~~ID~lT~~~~~~~~~d~~~~~~q~~vKkAvcaQiey~~~~G 75 (138) |.+=+++ |.+-|+... |.+.+ ....++.-|...| .++.- .+.-.+...++..+-+-+| ..-.+.... T Consensus 1 ~~~~~~~v~Fd~a~FR~~fPeFa~~pd~~i~~~~~~A~~~~---l~n~~--~s~~~~~~~r~~ll~LltA-Hll~L~~~~ 74 (158) T protein:vir:10 1 MSTPPYRITFDPAGFIAEYPEFATVPTPRLQAMFNQAQAAL---LDNTG--GSPVTDDNVLRELFNMLVA-HLLTLFSAA 74 (158) T ss_pred CCCCCceEEcChHHHHHhCcccccCCHHHHHHHHHhhhhee---eCCcc--cccccChHHHHHHHHHHHH-HHHHHhhhh Confidence 5554543 455665432 22222 2455555554321 11110 0111222333344444333 454454333 Q ss_pred Cccccc--cCccCceeecceEEecccccccccccccccccccchHHHHHHHhhc--CceeccCcccC Q lcl|Aclame:pro 76 VMTAED--KQSFAGISLGRTSISYTVGHGQGSQQKTLADRFNLCLDAENELLVV--GLGYTGISYDR 138 (138) Q Consensus 76 ~~t~~~--~~~~~S~siG~tSvS~~~~~~~~~~~~~~~~~~~~s~~a~~~L~~t--GLLyrGV~~~r 138 (138) +..+.. .+.++|-|+|++||||.-...+.+....--....--.+-..++++- |-.+-|=...| T Consensus 75 ~~g~~~g~vG~vsSas~G~VSVS~d~~~~t~~~~~~W~~~T~YG~~fw~L~~~~~~Gg~v~Gg~pe~ 141 (158) T protein:vir:10 75 PTSANSRPPGRLSSATEGTVSSSFEYALPQGSAIAPWYNQTQYGAMFWMATAHYRSARYMVSGGSGI 141 (158) T ss_pred hcccccCcccceeeeeeCceeEEeeeccccCCchhhhhhcCHHHHHHHHHHHhhCccccccccCCcc Confidence 222222 2578999999999999532211111000000000112233344433 33444433333 No 63 >protein:vir:3639 Length: 158 # NCBI annotation: gp08 # Family: family:all:664 # MgeID: mge:75 # MgeName: Bcep781 # Cross-refs: genbank:acc:NP_705634;genbank:gi:23752319;genbank:GeneID:955737 Probab=27.90 E-value=1.8 Score=19.19 Aligned_cols=130 Identities=12% Similarity=0.024 Sum_probs=51.8 Q ss_pred ccccccc---CHHHHhcCC--CCChh--hHHHHHHHHHHHHhHHhcccccccCcccccHHHHHHHHHHHHHHHHHHHHcC Q lcl|Aclame:pro 3 VVIIAFL---TQKEFEDLG--FDDVE--DFEKMEKRASHAVNLYCRNRYDYKDLKKEIALVQKAVKRAIAYQIAYLNDSG 75 (138) Q Consensus 3 ~~~M~Yl---t~~eY~~~g--~~~~~--~F~kl~~rAs~~ID~lT~~~~~~~~~d~~~~~~q~~vKkAvcaQiey~~~~G 75 (138) |.+=+++ |.+-|+... |.+.+ ....++.-|...| .++.- .+.-.+...++..+-+-+| ..-.+.... T Consensus 1 ~~~~~~~v~Fd~a~FR~~fPeFa~~pd~~i~~~~~~A~~~~---l~n~~--~s~~~~~~~r~~ll~LltA-Hll~L~~~~ 74 (158) T protein:vir:36 1 MSTPPYRITFDPAGFIAEYPEFATVPTPRLQAMFNQAQAAL---LDNTG--GSPVTDDNVLRELFNMLVA-HLLTLFSAA 74 (158) T ss_pred CCCCCceEEcChHHHHHhCcccccCCHHHHHHHHHhhhhee---eCCcc--cccccChHHHHHHHHHHHH-HHHHHhhhh Confidence 5554543 455665432 22222 2455555554321 11110 0111222333344444333 454454333 Q ss_pred Cccccc--cCccCceeecceEEecccccccccccccccccccchHHHHHHHhhc--CceeccCcccC Q lcl|Aclame:pro 76 VMTAED--KQSFAGISLGRTSISYTVGHGQGSQQKTLADRFNLCLDAENELLVV--GLGYTGISYDR 138 (138) Q Consensus 76 ~~t~~~--~~~~~S~siG~tSvS~~~~~~~~~~~~~~~~~~~~s~~a~~~L~~t--GLLyrGV~~~r 138 (138) +..+.. .+.++|-|+|++||||.-...+.+....--....--.+-..++++- |-.+-|=...| T Consensus 75 ~~g~~~g~vG~vsSas~G~VSVS~d~~~~t~~~~~~W~~~T~YG~~fw~L~~~~~~Gg~v~Gg~pe~ 141 (158) T protein:vir:36 75 PTSANSRPPGRLSSATEGTVSSSFEYALPQGSAIAPWYNQTQYGAMFWMATAHYRSARYMVSGGSGI 141 (158) T ss_pred hcccccCcccceeeeeeCceeEEeeeccccCCchhhhhhcCHHHHHHHHHHHhhCccccccccCCcc Confidence 222222 2578999999999999532211111000000000112233344433 33444433333 No 64 >protein:vir:96108 Length: 155 # NCBI annotation: hypothetical protein ORF025 # Family: family:all:664 # MgeID: mge:1597 # MgeName: F8 # Cross-refs: genbank:acc:YP_001294442;genbank:gi:149408339;genbank:GeneID:5237227 Probab=25.33 E-value=2.1 Score=18.85 Aligned_cols=123 Identities=15% Similarity=0.079 Sum_probs=56.2 Q ss_pred cccccccCHHHHhcCC--CCC----h-hhHHHHHHHHHHHHhHHhcccccccCcccccHHHHHHHHHHHHHHHHHHHH-- Q lcl|Aclame:pro 3 VVIIAFLTQKEFEDLG--FDD----V-EDFEKMEKRASHAVNLYCRNRYDYKDLKKEIALVQKAVKRAIAYQIAYLND-- 73 (138) Q Consensus 3 ~~~M~Ylt~~eY~~~g--~~~----~-~~F~kl~~rAs~~ID~lT~~~~~~~~~d~~~~~~q~~vKkAvcaQiey~~~-- 73 (138) |++| |.+-|+... |.+ | +.....+..|...|+.=+... -+..-+.++..+-. +.|.+-.+.. T Consensus 1 ~v~f---d~~~FR~~fPeFad~~~~Pd~~i~~~l~~A~~~l~~~~~~s-----~~~~g~~~~~~l~L-l~AH~l~L~~~~ 71 (155) T protein:vir:96 1 MVIF---DEQKFRTLFPEFADPASYPAVRLQLYFDIACEFISDRDSPY-----RILNGKALEACLYL-LTAHLLSLSTMQ 71 (155) T ss_pred Cccc---CHHHHHHhCccccCcccCCHHHHHHHHHHHHHhhcCCCccc-----cccChHHHHHHHHH-HHHHHHHHHHHh Confidence 6666 555565432 222 2 347777888877775422110 01112334333333 3334444432 Q ss_pred -cCCccc------cccCccCceeecceEEecccccccccccccccccccch---HHHHHHHh--hcCceeccCcccC Q lcl|Aclame:pro 74 -SGVMTA------EDKQSFAGISLGRTSISYTVGHGQGSQQKTLADRFNLC---LDAENELL--VVGLGYTGISYDR 138 (138) Q Consensus 74 -~G~~t~------~~~~~~~S~siG~tSvS~~~~~~~~~~~~~~~~~~~~s---~~a~~~L~--~tGLLyrGV~~~r 138 (138) .|..-. ...+.++|.|+|++||||......+..+. =++.+ .+-..+++ ++|-++-|=...| T Consensus 72 ~~gaa~~g~~~~g~~~G~vsSas~G~VSVSy~~~~~~~~~~~----w~~~T~YGq~f~~l~~~~~~Gg~~vgG~per 144 (155) T protein:vir:96 72 VQGAAGGGVTAGGTQGGFITSATVGEVSVAKLAPPAKNGWQW----WLSGTPYGQELWALLSVKAVGGFYIGGLPER 144 (155) T ss_pred hhhccccccccccccccceeeceecceeeeeecCCCCCchhH----HhhcCHHHHHHHHHHHHhcccccccCCCCcc Confidence 222110 11345899999999999964322111111 01111 12233333 4444565544555 No 65 >protein:vir:104088 Length: 125 # NCBI annotation: gp20 # Family: family:all:2817 # MgeID: mge:1656 # MgeName: Che12 # Cross-refs: genbank:acc:YP_655599;genbank:gi:109392470;genbank:GeneID:4156956 Probab=24.66 E-value=2.1 Score=18.76 Aligned_cols=112 Identities=12% Similarity=-0.017 Sum_probs=57.4 Q ss_pred ccccCHHHHhc-CCCC--Chh--hHHHHHHHHHHHHhHHhcccccccC-cccccHHHHHHHHHHHHHHHHHHHHcCCccc Q lcl|Aclame:pro 6 IAFLTQKEFED-LGFD--DVE--DFEKMEKRASHAVNLYCRNRYDYKD-LKKEIALVQKAVKRAIAYQIAYLNDSGVMTA 79 (138) Q Consensus 6 M~Ylt~~eY~~-~g~~--~~~--~F~kl~~rAs~~ID~lT~~~~~~~~-~d~~~~~~q~~vKkAvcaQiey~~~~G~~t~ 79 (138) |+|+|.+.+.. .+.. +.+ --+.+|.+||+.|=.-.-+-..+.. ...+..-..+-++.||.. .+=+-.| T Consensus 1 ma~A~~~Dv~~~w~r~lT~~E~~~v~~~L~~Ae~~Ir~riP~L~~r~~a~~~~~~~v~~Vea~aV~R--v~rNPeG---- 74 (125) T protein:vir:10 1 MAYANAQDVVTLWAKEPEPEVMELIERRLAQVERMIKRRIPNLDLKVAADATFQADLIDIEADAVLR--LVRNPEG---- 74 (125) T ss_pred CCcCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHhCCChhhhhhcCCCccccHHHHHHHHHHH--HhcCCCc---- Confidence 99999999987 3332 222 2799999999999754433332221 222222244666667766 1211222 Q ss_pred cccCccCceeecceEEecccccccccccccccccccchHHHHHHHhhcCceeccCcccC Q lcl|Aclame:pro 80 EDKQSFAGISLGRTSISYTVGHGQGSQQKTLADRFNLCLDAENELLVVGLGYTGISYDR 138 (138) Q Consensus 80 ~~~~~~~S~siG~tSvS~~~~~~~~~~~~~~~~~~~~s~~a~~~L~~tGLLyrGV~~~r 138 (138) .-|-+.|..|-|.+..- ..+...|.++=...|.+.- -.|.--.| T Consensus 75 -----y~s~T~G~Ys~~l~~~~--------~~g~L~it~~Ew~~Lg~~r--~s~~~~i~ 118 (125) T protein:vir:10 75 -----YISETDGAYTYQLQTDL--------SQGRLTILDDEWTTLGVNR--LSRMSVIA 118 (125) T ss_pred -----ccccccchhHHhhhccc--------ccCceeeCHHHHHhhcccc--ccceeeee Confidence 23445577666654211 1123346666566665432 12222222 No 66 >protein:vir:96488 Length: 113 # NCBI annotation: hypothetical protein # Family: family:all:372 # MgeID: mge:1620 # MgeName: 2972 # Cross-refs: genbank:acc:YP_238494;genbank:gi:66391770;genbank:GeneID:5176910 Probab=24.25 E-value=2.2 Score=18.71 Aligned_cols=105 Identities=16% Similarity=0.169 Sum_probs=54.5 Q ss_pred ccccCHHHH-hcCCCC----ChhhHHHHHHHHHHHHhHHhcccccccCcccccHHHHHHHHHHHHHHHHHHHHcCCcccc Q lcl|Aclame:pro 6 IAFLTQKEF-EDLGFD----DVEDFEKMEKRASHAVNLYCRNRYDYKDLKKEIALVQKAVKRAIAYQIAYLNDSGVMTAE 80 (138) Q Consensus 6 M~Ylt~~eY-~~~g~~----~~~~F~kl~~rAs~~ID~lT~~~~~~~~~d~~~~~~q~~vKkAvcaQiey~~~~G~~t~~ 80 (138) |..|+...= ..+... +.+-+..++++|++.|=..++- ..++..-+|+...| |+.. ++..| ++ T Consensus 1 M~~L~~~K~l~~ik~~~~~~~D~lL~~ii~~a~~~i~~~l~~----~~iP~~L~~Iv~ev--avkr----yNR~g---~E 67 (113) T protein:vir:96 1 MMALDKDKVIKNVSVDLNTDDDVLLKILLERVVNHFKSEYGV----EEIDDKLAFIFEDC--VIKR----FNRRG---AE 67 (113) T ss_pred CchhHHHHHHhcCCCCCCCchhHHHHHHHHHHHHHHHHHhcc----cccchhHHHHHHHH--HHHH----hcCCC---cc Confidence 665553322 233322 2123899999999998887751 22333334544332 2222 44555 33 Q ss_pred ccCccCceeecceEEecccccccccccccccccccchH-HHHHHHhhcCceeccCcccC Q lcl|Aclame:pro 81 DKQSFAGISLGRTSISYTVGHGQGSQQKTLADRFNLCL-DAENELLVVGLGYTGISYDR 138 (138) Q Consensus 81 ~~~~~~S~siG~tSvS~~~~~~~~~~~~~~~~~~~~s~-~a~~~L~~tGLLyrGV~~~r 138 (138) + .+|.|.++.|+||..+.+. +.=+. +.-.|+.+.|-.-||. +| T Consensus 68 G---~~S~S~eG~S~sf~d~~~d----------f~eY~~~l~~~~~~~~~~~~G~--v~ 111 (113) T protein:vir:96 68 G---AKSESVDGHSMSYYDNENE----------FKPYDDMLQRLYGTSGQSKEGE--VL 111 (113) T ss_pred c---cceeccCceeeeecccccc----------cchhHHHHHHHHhhcCCCCCce--ee Confidence 3 5699999999999532221 11112 2333555555444443 55 No 67 >protein:vir:100103 Length: 120 # NCBI annotation: gp7 # Family: family:all:363 # MgeID: mge:1639 # MgeName: phi1026b # Cross-refs: genbank:acc:NP_945037;genbank:gi:38707897;genbank:GeneID:2744150 Probab=24.22 E-value=1.7 Score=19.33 Aligned_cols=101 Identities=16% Similarity=0.136 Sum_probs=57.7 Q ss_pred cc-cccccCHHHHhc-CCCC--Ch-hhHHHHHHHHHHHHhHHhcccccccCcc---------cccH--HHHHHHHHHHHH Q lcl|Aclame:pro 3 VV-IIAFLTQKEFED-LGFD--DV-EDFEKMEKRASHAVNLYCRNRYDYKDLK---------KEIA--LVQKAVKRAIAY 66 (138) Q Consensus 3 ~~-~M~Ylt~~eY~~-~g~~--~~-~~F~kl~~rAs~~ID~lT~~~~~~~~~d---------~~~~--~~q~~vKkAvca 66 (138) |. .|+.+|.++-|. +-.+ +. +-+..++.-|++.|-..|+..+....-+ ...+ -.-..||.|+.. T Consensus 1 ~~~~m~~vtL~e~K~hLRvd~d~DD~lI~~~i~AA~~~v~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~AvLl 80 (120) T protein:vir:10 1 MADQTPIVSLEVALAHLREDAGVADDLIKIYIGAATQSASDYVDRKLYANDAEMQAAVADATAGADPIVANDAIRAAILL 80 (120) T ss_pred CCCCCCccCHHHHHHHcCCCCCcchHHHHHHHHHHHHHHHHHhCCcccccccccchhhhccccccccccCCHHHHHHHHH Confidence 44 488999999986 4332 22 2389999999999999998654322111 1111 134789999999 Q ss_pred HHHHHHHcCCccccccCccCceeecceEEecccccccccccccccccccchHHHHHHHhhcCceec---cC Q lcl|Aclame:pro 67 QIAYLNDSGVMTAEDKQSFAGISLGRTSISYTVGHGQGSQQKTLADRFNLCLDAENELLVVGLGYT---GI 134 (138) Q Consensus 67 Qiey~~~~G~~t~~~~~~~~S~siG~tSvS~~~~~~~~~~~~~~~~~~~~s~~a~~~L~~tGLLyr---GV 134 (138) -+.+++++-.....+.. . ++ ..+...+..+|.+ || || T Consensus 81 lvg~~YenRe~~~~~~~----~-----~~------------------~~lP~~v~~Ll~~----yR~~~gv 120 (120) T protein:vir:10 81 TIGKLYAFREDVVSGAS----A-----SV------------------TELPSGAKSLLFP----YRVGLGV 120 (120) T ss_pred HHHHHHhchhhhhhccc----c-----cc------------------cccCHHHHHHHHH----hhhccCC Confidence 99999998643211100 0 00 0122223444432 22 44 No 68 >protein:vir:102961 Length: 131 # NCBI annotation: hypothetical protein # Family: family:all:26777 # MgeID: mge:1461 # MgeName: EJ-1 # Cross-refs: genbank:acc:NP_945287;genbank:gi:39653722;uniprot:Q708M5;genbank:GeneID:2672875 Probab=23.73 E-value=2.3 Score=18.63 Aligned_cols=108 Identities=11% Similarity=0.105 Sum_probs=48.9 Q ss_pred cccccccCHHHHhc----------CCCCChh---h---HHHHHHHHHHHHhHHhcccccccCcccccHHHH-HHHHHHHH Q lcl|Aclame:pro 3 VVIIAFLTQKEFED----------LGFDDVE---D---FEKMEKRASHAVNLYCRNRYDYKDLKKEIALVQ-KAVKRAIA 65 (138) Q Consensus 3 ~~~M~Ylt~~eY~~----------~g~~~~~---~---F~kl~~rAs~~ID~lT~~~~~~~~~d~~~~~~q-~~vKkAvc 65 (138) |+ ++-|. +|..+.+ | +.-.+.+|...|=..|| ++..|+-.. -.++.|+- T Consensus 1 ~~-------~~lkq~~~~~~~~~~l~~~~d~~~kD~~vl~faie~v~~~IlnycN-------ikeiP~~Le~v~~~maiD 66 (131) T protein:vir:10 1 MI-------QELKQDNTMYLISCVRKMRQDNYFKDMEVLHYALTQAENEILNYIH-------QDSVPGRLENVWIDMTND 66 (131) T ss_pred Ch-------hhhhhhhhhhhhhhhhccccccccchHHHHHHHHHHHHHHHhhhcC-------CcccchhhHHHHHHHHHH Confidence 33 33333 2333221 1 34555555555555554 444554332 24555553 Q ss_pred HHHHHHHHcCCcc----ccccCccCceeecceEEecccccccccccccccccccchHHHHHHHhhcCceeccCcccC Q lcl|Aclame:pro 66 YQIAYLNDSGVMT----AEDKQSFAGISLGRTSISYTVGHGQGSQQKTLADRFNLCLDAENELLVVGLGYTGISYDR 138 (138) Q Consensus 66 aQiey~~~~G~~t----~~~~~~~~S~siG~tSvS~~~~~~~~~~~~~~~~~~~~s~~a~~~L~~tGLLyrGV~~~r 138 (138) . -.-...|..- ....+.++|++.|.|||||.++. ...++. .+..+||...+.-.+ +|-| T Consensus 67 l--l~~e~~~~~k~~~i~~~~g~VsSI~eGDTsIsf~s~t-------~~~qrl---~~~~s~l~~Y~~qL~--~yRR 129 (131) T protein:vir:10 67 L--LDKVKEQSVLAEKAGADDFSVKSIKMGDTTIEKVSPY-------EMIQRM---KQVPSSLERYKRQLN--RFRK 129 (131) T ss_pred H--HhhhcccccccccccccccceeeeeecceeeeccCCc-------cHHHHH---HHHHHHHhhhHHHHh--hhcc Confidence 2 1111111110 12345799999999999996442 122221 234556665544211 2333 Done!